#transId geneId source chrom start end strand proteinId geneName transcriptName geneType transcriptType MGP_WSBEiJ_T0020190.1 MGP_WSBEiJ_G0015620.1 mouse_genomes_project 1 79698551 79755305 - MGP_WSBEiJ_P0020190 Wdfy1 protein_coding protein_coding MGP_WSBEiJ_T0020191.1 MGP_WSBEiJ_G0015620.1 mouse_genomes_project 1 79701642 79755274 - MGP_WSBEiJ_P0020191 Wdfy1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020192.1 MGP_WSBEiJ_G0015620.1 mouse_genomes_project 1 79714832 79769197 - MGP_WSBEiJ_P0020192 Wdfy1 protein_coding protein_coding MGP_WSBEiJ_T0020193.1 MGP_WSBEiJ_G0015620.1 mouse_genomes_project 1 79717597 79755305 - MGP_WSBEiJ_P0020193 Wdfy1 protein_coding protein_coding MGP_WSBEiJ_T0020194.1 MGP_WSBEiJ_G0015620.1 mouse_genomes_project 1 79717610 79755305 - MGP_WSBEiJ_P0020194 Wdfy1 protein_coding protein_coding MGP_WSBEiJ_T0020195.1 MGP_WSBEiJ_G0015620.1 mouse_genomes_project 1 79717799 79721293 - Wdfy1 protein_coding processed_transcript MGP_WSBEiJ_T0020196.1 MGP_WSBEiJ_G0015620.1 mouse_genomes_project 1 79724704 79755257 - Wdfy1 protein_coding retained_intron MGP_WSBEiJ_T0020197.1 MGP_WSBEiJ_G0015620.1 mouse_genomes_project 1 79724937 79755583 - MGP_WSBEiJ_P0020197 Wdfy1 protein_coding protein_coding MGP_WSBEiJ_T0022131.1 MGP_WSBEiJ_G0016032.1 mouse_genomes_project 1 159526420 159578515 - MGP_WSBEiJ_P0022131 Soat1 protein_coding protein_coding MGP_WSBEiJ_T0022132.1 MGP_WSBEiJ_G0016032.1 mouse_genomes_project 1 159531674 159570797 - MGP_WSBEiJ_P0022132 Soat1 protein_coding protein_coding MGP_WSBEiJ_T0022133.1 MGP_WSBEiJ_G0016032.1 mouse_genomes_project 1 159532607 159534449 - Soat1 protein_coding retained_intron MGP_WSBEiJ_T0022134.1 MGP_WSBEiJ_G0016032.1 mouse_genomes_project 1 159532865 159534895 - Soat1 protein_coding retained_intron MGP_WSBEiJ_T0022135.1 MGP_WSBEiJ_G0016032.1 mouse_genomes_project 1 159543239 159578424 - Soat1 protein_coding retained_intron MGP_WSBEiJ_T0022136.1 MGP_WSBEiJ_G0016032.1 mouse_genomes_project 1 159543665 159578480 - MGP_WSBEiJ_P0022136 Soat1 protein_coding protein_coding MGP_WSBEiJ_T0022137.1 MGP_WSBEiJ_G0016032.1 mouse_genomes_project 1 159550241 159578381 - Soat1 protein_coding retained_intron MGP_WSBEiJ_T0022138.1 MGP_WSBEiJ_G0016032.1 mouse_genomes_project 1 159550474 159578448 - MGP_WSBEiJ_P0022138 Soat1 protein_coding protein_coding MGP_WSBEiJ_T0020036.1 MGP_WSBEiJ_G0015595.1 mouse_genomes_project 1 75054912 75058468 - MGP_WSBEiJ_P0020036 A630095N17Rik protein_coding protein_coding MGP_WSBEiJ_T0020037.1 MGP_WSBEiJ_G0015595.1 mouse_genomes_project 1 75055073 75066858 - MGP_WSBEiJ_P0020037 A630095N17Rik protein_coding protein_coding MGP_WSBEiJ_T0020038.1 MGP_WSBEiJ_G0015595.1 mouse_genomes_project 1 75065630 75066870 - MGP_WSBEiJ_P0020038 A630095N17Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000478.1 MGP_WSBEiJ_G0000423.1 mouse_genomes_project 1 67626178 67627531 - TEC TEC MGP_WSBEiJ_T0011971.1 MGP_WSBEiJ_G0010101.1 mouse_genomes_project 1 119883964 119884952 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019148.1 MGP_WSBEiJ_G0015428.1 mouse_genomes_project 1 51714325 51754590 - MGP_WSBEiJ_P0019148 1700019D03Rik protein_coding protein_coding MGP_WSBEiJ_T0019149.1 MGP_WSBEiJ_G0015428.1 mouse_genomes_project 1 51714325 51744657 - MGP_WSBEiJ_P0019149 1700019D03Rik protein_coding protein_coding MGP_WSBEiJ_T0019150.1 MGP_WSBEiJ_G0015428.1 mouse_genomes_project 1 51714325 51744151 - MGP_WSBEiJ_P0019150 1700019D03Rik protein_coding protein_coding MGP_WSBEiJ_T0019151.1 MGP_WSBEiJ_G0015428.1 mouse_genomes_project 1 51718298 51804136 - MGP_WSBEiJ_P0019151 1700019D03Rik protein_coding protein_coding MGP_WSBEiJ_T0019152.1 MGP_WSBEiJ_G0015428.1 mouse_genomes_project 1 51718303 51763401 - MGP_WSBEiJ_P0019152 1700019D03Rik protein_coding protein_coding MGP_WSBEiJ_T0019153.1 MGP_WSBEiJ_G0015428.1 mouse_genomes_project 1 51718313 51786050 - MGP_WSBEiJ_P0019153 1700019D03Rik protein_coding protein_coding MGP_WSBEiJ_T0022573.1 MGP_WSBEiJ_G0016115.1 mouse_genomes_project 1 170111321 170130452 - MGP_WSBEiJ_P0022573 Gm4847 protein_coding protein_coding MGP_WSBEiJ_T0021784.1 MGP_WSBEiJ_G0015964.1 mouse_genomes_project 1 141879861 141899420 + MGP_WSBEiJ_P0021784 Zbtb41 protein_coding protein_coding MGP_WSBEiJ_T0021785.1 MGP_WSBEiJ_G0015964.1 mouse_genomes_project 1 141879949 141910558 + MGP_WSBEiJ_P0021785 Zbtb41 protein_coding protein_coding MGP_WSBEiJ_T0021786.1 MGP_WSBEiJ_G0015964.1 mouse_genomes_project 1 141881220 141906736 + MGP_WSBEiJ_P0021786 Zbtb41 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100399.1 MGP_WSBEiJ_G0038858.1 mouse_genomes_project 1 88383129 88383959 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0022240.1 MGP_WSBEiJ_G0016048.1 mouse_genomes_project 1 163390402 163463149 - MGP_WSBEiJ_P0022240 Tnn protein_coding protein_coding MGP_WSBEiJ_T0022241.1 MGP_WSBEiJ_G0016048.1 mouse_genomes_project 1 163391342 163457458 - MGP_WSBEiJ_P0022241 Tnn protein_coding protein_coding MGP_WSBEiJ_T0002769.1 MGP_WSBEiJ_G0002626.1 mouse_genomes_project 1 74793832 74799103 + Gm15841 antisense antisense MGP_WSBEiJ_T0005816.1 MGP_WSBEiJ_G0004875.1 mouse_genomes_project 1 134313012 134319762 - Gm29630 lincRNA lincRNA MGP_WSBEiJ_T0022210.1 MGP_WSBEiJ_G0016044.1 mouse_genomes_project 1 161944908 162207892 - MGP_WSBEiJ_P0022210 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022211.1 MGP_WSBEiJ_G0016044.1 mouse_genomes_project 1 161996052 162048500 - MGP_WSBEiJ_P0022211 protein_coding protein_coding MGP_WSBEiJ_T0022212.1 MGP_WSBEiJ_G0016044.1 mouse_genomes_project 1 162048304 162084266 - protein_coding retained_intron MGP_WSBEiJ_T0022213.1 MGP_WSBEiJ_G0016044.1 mouse_genomes_project 1 162067074 162076981 - protein_coding processed_transcript MGP_WSBEiJ_T0022214.1 MGP_WSBEiJ_G0016044.1 mouse_genomes_project 1 162206934 162210333 - protein_coding processed_transcript MGP_WSBEiJ_T0022215.1 MGP_WSBEiJ_G0016044.1 mouse_genomes_project 1 162206985 162232524 - protein_coding processed_transcript MGP_WSBEiJ_T0002922.1 MGP_WSBEiJ_G0002749.1 mouse_genomes_project 1 196517902 196519524 - Gm38037 antisense antisense MGP_WSBEiJ_T0009328.1 MGP_WSBEiJ_G0007485.1 mouse_genomes_project 1 27721678 27721788 + Gm23771 miRNA miRNA MGP_WSBEiJ_T0002874.1 MGP_WSBEiJ_G0002709.1 mouse_genomes_project 1 169889309 169889964 - Gm15853 antisense antisense MGP_WSBEiJ_T0021675.1 MGP_WSBEiJ_G0015943.1 mouse_genomes_project 1 138178023 138226983 - MGP_WSBEiJ_P0021675 Pkp1 protein_coding protein_coding MGP_WSBEiJ_T0021676.1 MGP_WSBEiJ_G0015943.1 mouse_genomes_project 1 138179578 138226896 - MGP_WSBEiJ_P0021676 Pkp1 protein_coding protein_coding MGP_WSBEiJ_T0021677.1 MGP_WSBEiJ_G0015943.1 mouse_genomes_project 1 138180010 138226918 - MGP_WSBEiJ_P0021677 Pkp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021678.1 MGP_WSBEiJ_G0015943.1 mouse_genomes_project 1 138183962 138184921 - Pkp1 protein_coding retained_intron MGP_WSBEiJ_T0022692.1 MGP_WSBEiJ_G0016150.1 mouse_genomes_project 1 174803134 174814285 + MGP_WSBEiJ_P0022692 Mpz protein_coding protein_coding MGP_WSBEiJ_T0022693.1 MGP_WSBEiJ_G0016150.1 mouse_genomes_project 1 174807919 174812918 + MGP_WSBEiJ_P0022693 Mpz protein_coding protein_coding MGP_WSBEiJ_T0022694.1 MGP_WSBEiJ_G0016150.1 mouse_genomes_project 1 174812004 174812641 + Mpz protein_coding processed_transcript MGP_WSBEiJ_T0022695.1 MGP_WSBEiJ_G0016150.1 mouse_genomes_project 1 174812113 174812656 + Mpz protein_coding processed_transcript MGP_WSBEiJ_T0000353.1 MGP_WSBEiJ_G0000301.1 mouse_genomes_project 1 10471178 10471873 - TEC TEC MGP_WSBEiJ_T0098747.1 MGP_WSBEiJ_G0037410.1 mouse_genomes_project 1 37826557 37826687 - Gm23722 snoRNA snoRNA MGP_WSBEiJ_T0097563.1 MGP_WSBEiJ_G0036226.1 mouse_genomes_project 1 118927044 118927208 + Gm24030 snRNA snRNA MGP_WSBEiJ_T0022139.1 MGP_WSBEiJ_G0016033.1 mouse_genomes_project 1 159675156 159743101 + MGP_WSBEiJ_P0022139 Abl2 protein_coding protein_coding MGP_WSBEiJ_T0022140.1 MGP_WSBEiJ_G0016033.1 mouse_genomes_project 1 159675357 159773053 + MGP_WSBEiJ_P0022140 Abl2 protein_coding protein_coding MGP_WSBEiJ_T0022141.1 MGP_WSBEiJ_G0016033.1 mouse_genomes_project 1 159675419 159764639 + MGP_WSBEiJ_P0022141 Abl2 protein_coding protein_coding MGP_WSBEiJ_T0022142.1 MGP_WSBEiJ_G0016033.1 mouse_genomes_project 1 159733687 159750486 + MGP_WSBEiJ_P0022142 Abl2 protein_coding protein_coding MGP_WSBEiJ_T0019781.1 MGP_WSBEiJ_G0015549.1 mouse_genomes_project 1 72420242 72487440 - MGP_WSBEiJ_P0019781 Ankar protein_coding protein_coding MGP_WSBEiJ_T0022677.1 MGP_WSBEiJ_G0016146.1 mouse_genomes_project 1 174661760 174672617 + MGP_WSBEiJ_P0022677 Fcgr4 protein_coding protein_coding MGP_WSBEiJ_T0019224.1 MGP_WSBEiJ_G0015444.1 mouse_genomes_project 1 53928699 53951851 + MGP_WSBEiJ_P0019224 Coq10b protein_coding protein_coding MGP_WSBEiJ_T0019225.1 MGP_WSBEiJ_G0015444.1 mouse_genomes_project 1 53928699 53949783 + MGP_WSBEiJ_P0019225 Coq10b protein_coding protein_coding MGP_WSBEiJ_T0019226.1 MGP_WSBEiJ_G0015444.1 mouse_genomes_project 1 53928798 53930023 + Coq10b protein_coding retained_intron MGP_WSBEiJ_T0019227.1 MGP_WSBEiJ_G0015444.1 mouse_genomes_project 1 53936309 53938428 + Coq10b protein_coding retained_intron MGP_WSBEiJ_T0098810.1 MGP_WSBEiJ_G0037473.1 mouse_genomes_project 1 164398060 164398144 + Mir5117 snoRNA snoRNA MGP_WSBEiJ_T0002724.1 MGP_WSBEiJ_G0002595.1 mouse_genomes_project 1 38355231 38366086 - Gm16894 antisense antisense MGP_WSBEiJ_T0005921.1 MGP_WSBEiJ_G0004960.1 mouse_genomes_project 1 186089572 186098239 + lincRNA lincRNA MGP_WSBEiJ_T0005922.1 MGP_WSBEiJ_G0004960.1 mouse_genomes_project 1 186092590 186098217 + lincRNA lincRNA MGP_WSBEiJ_T0005923.1 MGP_WSBEiJ_G0004960.1 mouse_genomes_project 1 186096955 186099272 + lincRNA lincRNA MGP_WSBEiJ_T0011979.1 MGP_WSBEiJ_G0010109.1 mouse_genomes_project 1 121327484 121327714 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000663.1 MGP_WSBEiJ_G0000606.1 mouse_genomes_project 1 159699451 159704662 + TEC TEC MGP_WSBEiJ_T0023564.1 MGP_WSBEiJ_G0016356.1 mouse_genomes_project 1 196673359 196684271 + MGP_WSBEiJ_P0023564 Rd3 protein_coding protein_coding MGP_WSBEiJ_T0023565.1 MGP_WSBEiJ_G0016356.1 mouse_genomes_project 1 196673362 196682382 + MGP_WSBEiJ_P0023565 Rd3 protein_coding protein_coding MGP_WSBEiJ_T0023566.1 MGP_WSBEiJ_G0016356.1 mouse_genomes_project 1 196674240 196682381 + MGP_WSBEiJ_P0023566 Rd3 protein_coding protein_coding MGP_WSBEiJ_T0023567.1 MGP_WSBEiJ_G0016356.1 mouse_genomes_project 1 196680159 196682382 + Rd3 protein_coding retained_intron MGP_WSBEiJ_T0005960.1 MGP_WSBEiJ_G0004988.1 mouse_genomes_project 1 195008382 195033317 - Gm30725 lincRNA lincRNA MGP_WSBEiJ_T0097554.1 MGP_WSBEiJ_G0036217.1 mouse_genomes_project 1 87572641 87572742 + Gm26187 snRNA snRNA MGP_WSBEiJ_T0002710.1 MGP_WSBEiJ_G0002583.1 mouse_genomes_project 1 34145770 34146836 - Gm37335 antisense antisense MGP_WSBEiJ_T0021228.1 MGP_WSBEiJ_G0015842.1 mouse_genomes_project 1 130186521 130243268 - MGP_WSBEiJ_P0021228 Dars protein_coding protein_coding MGP_WSBEiJ_T0021229.1 MGP_WSBEiJ_G0015842.1 mouse_genomes_project 1 130199756 130204927 - Dars protein_coding retained_intron MGP_WSBEiJ_T0021230.1 MGP_WSBEiJ_G0015842.1 mouse_genomes_project 1 130237853 130243277 - MGP_WSBEiJ_P0021230 Dars protein_coding protein_coding MGP_WSBEiJ_T0011727.1 MGP_WSBEiJ_G0009857.1 mouse_genomes_project 1 26925748 26926298 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023245.1 MGP_WSBEiJ_G0016289.1 mouse_genomes_project 1 185387321 185409396 + MGP_WSBEiJ_P0023245 Cnih4 protein_coding protein_coding MGP_WSBEiJ_T0023246.1 MGP_WSBEiJ_G0016289.1 mouse_genomes_project 1 185387383 185409396 + MGP_WSBEiJ_P0023246 Cnih4 protein_coding protein_coding MGP_WSBEiJ_T0023247.1 MGP_WSBEiJ_G0016289.1 mouse_genomes_project 1 185392633 185406784 + Cnih4 protein_coding processed_transcript MGP_WSBEiJ_T0023248.1 MGP_WSBEiJ_G0016289.1 mouse_genomes_project 1 185393614 185406752 + Cnih4 protein_coding retained_intron MGP_WSBEiJ_T0011921.1 MGP_WSBEiJ_G0010051.1 mouse_genomes_project 1 99709624 99710338 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005728.1 MGP_WSBEiJ_G0004801.1 mouse_genomes_project 1 85975992 85986091 + 9930111H07Rik lincRNA lincRNA MGP_WSBEiJ_T0002876.1 MGP_WSBEiJ_G0002711.1 mouse_genomes_project 1 173554426 173557273 + 3110045C21Rik antisense antisense MGP_WSBEiJ_T0002877.1 MGP_WSBEiJ_G0002711.1 mouse_genomes_project 1 173554469 173557247 + 3110045C21Rik antisense antisense MGP_WSBEiJ_T0019230.1 MGP_WSBEiJ_G0015446.1 mouse_genomes_project 1 53970204 53973486 + MGP_WSBEiJ_P0019230 Hspe1 protein_coding protein_coding MGP_WSBEiJ_T0019231.1 MGP_WSBEiJ_G0015446.1 mouse_genomes_project 1 53970386 53971988 + Hspe1 protein_coding retained_intron MGP_WSBEiJ_T0002884.1 MGP_WSBEiJ_G0002716.1 mouse_genomes_project 1 175644698 175659649 - antisense antisense MGP_WSBEiJ_T0016482.1 MGP_WSBEiJ_G0014538.1 mouse_genomes_project 1 168317797 168328467 + Gm20743 processed_transcript lincRNA MGP_WSBEiJ_T0016483.1 MGP_WSBEiJ_G0014538.1 mouse_genomes_project 1 168318022 168394112 + Gm20743 processed_transcript antisense MGP_WSBEiJ_T0019362.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57775020 57777589 + Cflar protein_coding processed_transcript MGP_WSBEiJ_T0019363.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57775020 57819270 + Cflar protein_coding processed_transcript MGP_WSBEiJ_T0019364.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57775028 57778006 + Cflar protein_coding processed_transcript MGP_WSBEiJ_T0019365.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57775046 57777592 + Cflar protein_coding processed_transcript MGP_WSBEiJ_T0019366.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57775056 57781276 + Cflar protein_coding processed_transcript MGP_WSBEiJ_T0019367.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57775072 57823823 + MGP_WSBEiJ_P0019367 Cflar protein_coding protein_coding MGP_WSBEiJ_T0019368.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57776996 57799010 + MGP_WSBEiJ_P0019368 Cflar protein_coding protein_coding MGP_WSBEiJ_T0019369.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57777004 57786768 + Cflar protein_coding processed_transcript MGP_WSBEiJ_T0019370.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57777019 57820094 + MGP_WSBEiJ_P0019370 Cflar protein_coding protein_coding MGP_WSBEiJ_T0019371.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57777588 57781284 + Cflar protein_coding retained_intron MGP_WSBEiJ_T0019372.1 MGP_WSBEiJ_G0015472.1 mouse_genomes_project 1 57796530 57817382 + Cflar protein_coding processed_transcript MGP_WSBEiJ_T0023221.1 MGP_WSBEiJ_G0016283.1 mouse_genomes_project 1 185118187 185121976 + MGP_WSBEiJ_P0023221 Pycr2 protein_coding protein_coding MGP_WSBEiJ_T0023222.1 MGP_WSBEiJ_G0016283.1 mouse_genomes_project 1 185118203 185120514 + Pycr2 protein_coding retained_intron MGP_WSBEiJ_T0023223.1 MGP_WSBEiJ_G0016283.1 mouse_genomes_project 1 185118217 185121975 + Pycr2 protein_coding retained_intron MGP_WSBEiJ_T0023224.1 MGP_WSBEiJ_G0016283.1 mouse_genomes_project 1 185119809 185120797 + Pycr2 protein_coding retained_intron MGP_WSBEiJ_T0012060.1 MGP_WSBEiJ_G0010190.1 mouse_genomes_project 1 159318700 159318901 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009352.1 MGP_WSBEiJ_G0007509.1 mouse_genomes_project 1 73675741 73675840 - Mir6351 miRNA miRNA MGP_WSBEiJ_T0009375.1 MGP_WSBEiJ_G0007532.1 mouse_genomes_project 1 97167509 97167619 + Gm22917 miRNA miRNA MGP_WSBEiJ_T0019872.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74404727 74431616 + MGP_WSBEiJ_P0019872 Plcd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019873.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74404727 74431616 + MGP_WSBEiJ_P0019873 Plcd4 protein_coding protein_coding MGP_WSBEiJ_T0019874.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74404727 74431616 + MGP_WSBEiJ_P0019874 Plcd4 protein_coding protein_coding MGP_WSBEiJ_T0019875.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74404742 74424424 + Plcd4 protein_coding retained_intron MGP_WSBEiJ_T0019876.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74404742 74429799 + MGP_WSBEiJ_P0019876 Plcd4 protein_coding protein_coding MGP_WSBEiJ_T0019877.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74404742 74429799 + MGP_WSBEiJ_P0019877 Plcd4 protein_coding protein_coding MGP_WSBEiJ_T0019878.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74406199 74409588 + Plcd4 protein_coding retained_intron MGP_WSBEiJ_T0019879.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74406203 74429799 + MGP_WSBEiJ_P0019879 Plcd4 protein_coding protein_coding MGP_WSBEiJ_T0019880.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74406203 74429799 + MGP_WSBEiJ_P0019880 Plcd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019881.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74424244 74429123 + Plcd4 protein_coding processed_transcript MGP_WSBEiJ_T0019882.1 MGP_WSBEiJ_G0015569.1 mouse_genomes_project 1 74428257 74429448 + Plcd4 protein_coding retained_intron MGP_WSBEiJ_T0002787.1 MGP_WSBEiJ_G0002643.1 mouse_genomes_project 1 93553518 93570458 - Gm29481 antisense antisense MGP_WSBEiJ_T0005603.1 MGP_WSBEiJ_G0004713.1 mouse_genomes_project 1 34388233 34388949 + 4930403P22Rik lincRNA lincRNA MGP_WSBEiJ_T0023095.1 MGP_WSBEiJ_G0016260.1 mouse_genomes_project 1 182403770 182417286 - MGP_WSBEiJ_P0023095 Hnrnpu protein_coding protein_coding MGP_WSBEiJ_T0023096.1 MGP_WSBEiJ_G0016260.1 mouse_genomes_project 1 182404259 182409748 - Hnrnpu protein_coding retained_intron MGP_WSBEiJ_T0023097.1 MGP_WSBEiJ_G0016260.1 mouse_genomes_project 1 182411298 182412359 - Hnrnpu protein_coding retained_intron MGP_WSBEiJ_T0023098.1 MGP_WSBEiJ_G0016260.1 mouse_genomes_project 1 182411535 182413989 - Hnrnpu protein_coding processed_transcript MGP_WSBEiJ_T0023099.1 MGP_WSBEiJ_G0016260.1 mouse_genomes_project 1 182415130 182415896 - Hnrnpu protein_coding retained_intron MGP_WSBEiJ_T0000594.1 MGP_WSBEiJ_G0000539.1 mouse_genomes_project 1 132435112 132436659 + TEC TEC MGP_WSBEiJ_T0098752.1 MGP_WSBEiJ_G0037415.1 mouse_genomes_project 1 51892580 51892681 + Gm24349 snoRNA snoRNA MGP_WSBEiJ_T0016410.1 MGP_WSBEiJ_G0014520.1 mouse_genomes_project 1 74736461 74765282 + Gm16582 processed_transcript processed_transcript MGP_WSBEiJ_T0009346.1 MGP_WSBEiJ_G0007503.1 mouse_genomes_project 1 62449119 62449214 + Gm24557 miRNA miRNA MGP_WSBEiJ_T0018982.1 MGP_WSBEiJ_G0015399.1 mouse_genomes_project 1 42601909 42607894 - MGP_WSBEiJ_P0018982 Gm8251 protein_coding protein_coding MGP_WSBEiJ_T0021166.1 MGP_WSBEiJ_G0015831.1 mouse_genomes_project 1 128974657 129165622 + Mgat5 protein_coding retained_intron MGP_WSBEiJ_T0021167.1 MGP_WSBEiJ_G0015831.1 mouse_genomes_project 1 128974660 129276410 + MGP_WSBEiJ_P0021167 Mgat5 protein_coding protein_coding MGP_WSBEiJ_T0021168.1 MGP_WSBEiJ_G0015831.1 mouse_genomes_project 1 128974670 129176198 + Mgat5 protein_coding retained_intron MGP_WSBEiJ_T0021169.1 MGP_WSBEiJ_G0015831.1 mouse_genomes_project 1 129082304 129271790 + MGP_WSBEiJ_P0021169 Mgat5 protein_coding protein_coding MGP_WSBEiJ_T0000430.1 MGP_WSBEiJ_G0000375.1 mouse_genomes_project 1 38876694 38880601 - TEC TEC MGP_WSBEiJ_T0022242.1 MGP_WSBEiJ_G0016049.1 mouse_genomes_project 1 163511964 163517419 + MGP_WSBEiJ_P0022242 Mrps14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022243.1 MGP_WSBEiJ_G0016049.1 mouse_genomes_project 1 163511964 163519711 + MGP_WSBEiJ_P0022243 Mrps14 protein_coding protein_coding MGP_WSBEiJ_T0022244.1 MGP_WSBEiJ_G0016049.1 mouse_genomes_project 1 163512052 163517411 + MGP_WSBEiJ_P0022244 Mrps14 protein_coding protein_coding MGP_WSBEiJ_T0022804.1 MGP_WSBEiJ_G0016169.1 mouse_genomes_project 1 175081094 175081589 + Tstd1 protein_coding processed_transcript MGP_WSBEiJ_T0022805.1 MGP_WSBEiJ_G0016169.1 mouse_genomes_project 1 175081255 175082575 + MGP_WSBEiJ_P0022805 Tstd1 protein_coding protein_coding MGP_WSBEiJ_T0022806.1 MGP_WSBEiJ_G0016169.1 mouse_genomes_project 1 175081941 175082574 + Tstd1 protein_coding retained_intron MGP_WSBEiJ_T0019373.1 MGP_WSBEiJ_G0015473.1 mouse_genomes_project 1 57859821 57918414 + MGP_WSBEiJ_P0019373 Casp8 protein_coding protein_coding MGP_WSBEiJ_T0019374.1 MGP_WSBEiJ_G0015473.1 mouse_genomes_project 1 57859924 57917665 + MGP_WSBEiJ_P0019374 Casp8 protein_coding protein_coding MGP_WSBEiJ_T0019375.1 MGP_WSBEiJ_G0015473.1 mouse_genomes_project 1 57868777 57917919 + MGP_WSBEiJ_P0019375 Casp8 protein_coding protein_coding MGP_WSBEiJ_T0019376.1 MGP_WSBEiJ_G0015473.1 mouse_genomes_project 1 57868928 57917665 + MGP_WSBEiJ_P0019376 Casp8 protein_coding protein_coding MGP_WSBEiJ_T0020875.1 MGP_WSBEiJ_G0015770.1 mouse_genomes_project 1 98515299 98575625 - MGP_WSBEiJ_P0020875 D1Ertd622e protein_coding protein_coding MGP_WSBEiJ_T0020876.1 MGP_WSBEiJ_G0015770.1 mouse_genomes_project 1 98559518 98575227 - MGP_WSBEiJ_P0020876 D1Ertd622e protein_coding protein_coding MGP_WSBEiJ_T0018172.1 MGP_WSBEiJ_G0015237.1 mouse_genomes_project 1 4134001 4227289 + MGP_WSBEiJ_P0018172 Pcmtd1 protein_coding protein_coding MGP_WSBEiJ_T0018173.1 MGP_WSBEiJ_G0015237.1 mouse_genomes_project 1 4134245 4214574 + Pcmtd1 protein_coding processed_transcript MGP_WSBEiJ_T0018174.1 MGP_WSBEiJ_G0015237.1 mouse_genomes_project 1 4134307 4225781 + Pcmtd1 protein_coding processed_transcript MGP_WSBEiJ_T0018175.1 MGP_WSBEiJ_G0015237.1 mouse_genomes_project 1 4196548 4223735 + MGP_WSBEiJ_P0018175 Pcmtd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018176.1 MGP_WSBEiJ_G0015237.1 mouse_genomes_project 1 4203810 4217043 + Pcmtd1 protein_coding retained_intron MGP_WSBEiJ_T0018177.1 MGP_WSBEiJ_G0015237.1 mouse_genomes_project 1 4213756 4226277 + Pcmtd1 protein_coding retained_intron MGP_WSBEiJ_T0018178.1 MGP_WSBEiJ_G0015237.1 mouse_genomes_project 1 4214228 4226318 + Pcmtd1 protein_coding retained_intron MGP_WSBEiJ_T0019300.1 MGP_WSBEiJ_G0015460.1 mouse_genomes_project 1 57015027 57098907 + MGP_WSBEiJ_P0019300 Aox1 protein_coding protein_coding MGP_WSBEiJ_T0019301.1 MGP_WSBEiJ_G0015460.1 mouse_genomes_project 1 57015060 57064337 + Aox1 protein_coding retained_intron MGP_WSBEiJ_T0002912.1 MGP_WSBEiJ_G0002741.1 mouse_genomes_project 1 192474256 192476671 - 9330162B11Rik antisense antisense MGP_WSBEiJ_T0011873.1 MGP_WSBEiJ_G0010003.1 mouse_genomes_project 1 71732662 71733142 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020541.1 MGP_WSBEiJ_G0015689.1 mouse_genomes_project 1 88531227 88627325 + protein_coding retained_intron MGP_WSBEiJ_T0020543.1 MGP_WSBEiJ_G0015689.1 mouse_genomes_project 1 88531293 88625827 + MGP_WSBEiJ_P0020543 protein_coding protein_coding MGP_WSBEiJ_T0000414.1 MGP_WSBEiJ_G0000359.1 mouse_genomes_project 1 32223163 32224410 - TEC TEC MGP_WSBEiJ_T0000522.1 MGP_WSBEiJ_G0000467.1 mouse_genomes_project 1 87117190 87119974 + TEC TEC MGP_WSBEiJ_T0100408.1 MGP_WSBEiJ_G0038867.1 mouse_genomes_project 1 93309968 93310014 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002757.1 MGP_WSBEiJ_G0002621.1 mouse_genomes_project 1 69109413 69144971 + Gm29114 antisense antisense MGP_WSBEiJ_T0002863.1 MGP_WSBEiJ_G0002701.1 mouse_genomes_project 1 165609016 165616934 + Dnm3os antisense antisense MGP_WSBEiJ_T0002864.1 MGP_WSBEiJ_G0002701.1 mouse_genomes_project 1 165609016 165616932 + Dnm3os antisense antisense MGP_WSBEiJ_T0002865.1 MGP_WSBEiJ_G0002701.1 mouse_genomes_project 1 165609057 165613501 + Dnm3os antisense antisense MGP_WSBEiJ_T0019713.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69135323 69288246 - MGP_WSBEiJ_P0019713 Ikzf2 protein_coding protein_coding MGP_WSBEiJ_T0019714.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69135868 69289547 - MGP_WSBEiJ_P0019714 Ikzf2 protein_coding protein_coding MGP_WSBEiJ_T0019715.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69136054 69284702 - MGP_WSBEiJ_P0019715 Ikzf2 protein_coding protein_coding MGP_WSBEiJ_T0019716.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69136054 69284702 - MGP_WSBEiJ_P0019716 Ikzf2 protein_coding protein_coding MGP_WSBEiJ_T0019717.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69136054 69289581 - MGP_WSBEiJ_P0019717 Ikzf2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0019718.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69136054 69284702 - MGP_WSBEiJ_P0019718 Ikzf2 protein_coding protein_coding MGP_WSBEiJ_T0019719.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69175734 69287662 - MGP_WSBEiJ_P0019719 Ikzf2 protein_coding protein_coding MGP_WSBEiJ_T0019720.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69282103 69285081 - Ikzf2 protein_coding retained_intron MGP_WSBEiJ_T0019721.1 MGP_WSBEiJ_G0015536.1 mouse_genomes_project 1 69282104 69289442 - Ikzf2 protein_coding retained_intron MGP_WSBEiJ_T0002834.1 MGP_WSBEiJ_G0002677.1 mouse_genomes_project 1 138581957 138596921 + Gm26781 antisense antisense MGP_WSBEiJ_T0022618.1 MGP_WSBEiJ_G0016129.1 mouse_genomes_project 1 173512767 173518492 + MGP_WSBEiJ_P0022618 Ccdc190 protein_coding protein_coding MGP_WSBEiJ_T0022619.1 MGP_WSBEiJ_G0016129.1 mouse_genomes_project 1 173514056 173518252 + MGP_WSBEiJ_P0022619 Ccdc190 protein_coding protein_coding MGP_WSBEiJ_T0012121.1 MGP_WSBEiJ_G0010251.1 mouse_genomes_project 1 188203101 188203248 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005974.1 MGP_WSBEiJ_G0005000.1 mouse_genomes_project 1 199732667 199738951 - Gm32250 lincRNA lincRNA MGP_WSBEiJ_T0005798.1 MGP_WSBEiJ_G0004861.1 mouse_genomes_project 1 122353400 122354735 + Gm29347 lincRNA lincRNA MGP_WSBEiJ_T0018720.1 MGP_WSBEiJ_G0015346.1 mouse_genomes_project 1 34849587 34874119 + MGP_WSBEiJ_P0018720 Zap70 protein_coding protein_coding MGP_WSBEiJ_T0018721.1 MGP_WSBEiJ_G0015346.1 mouse_genomes_project 1 34854723 34860049 + MGP_WSBEiJ_P0018721 Zap70 protein_coding protein_coding MGP_WSBEiJ_T0018722.1 MGP_WSBEiJ_G0015346.1 mouse_genomes_project 1 34859973 34861358 + Zap70 protein_coding retained_intron MGP_WSBEiJ_T0018723.1 MGP_WSBEiJ_G0015346.1 mouse_genomes_project 1 34870223 34874116 + Zap70 protein_coding retained_intron MGP_WSBEiJ_T0021002.1 MGP_WSBEiJ_G0015800.1 mouse_genomes_project 1 117053349 117976658 + MGP_WSBEiJ_P0021002 Cntnap5a protein_coding protein_coding MGP_WSBEiJ_T0021003.1 MGP_WSBEiJ_G0015800.1 mouse_genomes_project 1 117267042 117969771 + MGP_WSBEiJ_P0021003 Cntnap5a protein_coding unknown_likely_coding MGP_WSBEiJ_T0005941.1 MGP_WSBEiJ_G0004972.1 mouse_genomes_project 1 188922819 188941921 - Gm37800 lincRNA lincRNA MGP_WSBEiJ_T0005942.1 MGP_WSBEiJ_G0004972.1 mouse_genomes_project 1 188923457 188930423 - Gm37800 lincRNA lincRNA MGP_WSBEiJ_T0020365.1 MGP_WSBEiJ_G0015655.1 mouse_genomes_project 1 86256286 86266633 + MGP_WSBEiJ_P0020365 2810459M11Rik protein_coding protein_coding MGP_WSBEiJ_T0020366.1 MGP_WSBEiJ_G0015655.1 mouse_genomes_project 1 86256286 86264529 + MGP_WSBEiJ_P0020366 2810459M11Rik protein_coding protein_coding MGP_WSBEiJ_T0011644.1 MGP_WSBEiJ_G0009774.1 mouse_genomes_project 1 560163 561089 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002832.1 MGP_WSBEiJ_G0002675.1 mouse_genomes_project 1 138436543 138439789 - Gm37759 antisense antisense MGP_WSBEiJ_T0018112.1 MGP_WSBEiJ_G0015227.1 mouse_genomes_project 1 1863073 1906056 + MGP_WSBEiJ_P0018112 Lypla1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018113.1 MGP_WSBEiJ_G0015227.1 mouse_genomes_project 1 1863108 1904191 + MGP_WSBEiJ_P0018113 Lypla1 protein_coding protein_coding MGP_WSBEiJ_T0018114.1 MGP_WSBEiJ_G0015227.1 mouse_genomes_project 1 1863115 1898741 + MGP_WSBEiJ_P0018114 Lypla1 protein_coding protein_coding MGP_WSBEiJ_T0018116.1 MGP_WSBEiJ_G0015227.1 mouse_genomes_project 1 1863181 1902626 + MGP_WSBEiJ_P0018116 Lypla1 protein_coding protein_coding MGP_WSBEiJ_T0018117.1 MGP_WSBEiJ_G0015227.1 mouse_genomes_project 1 1863183 1898424 + MGP_WSBEiJ_P0018117 Lypla1 protein_coding protein_coding MGP_WSBEiJ_T0018118.1 MGP_WSBEiJ_G0015227.1 mouse_genomes_project 1 1863196 1902804 + MGP_WSBEiJ_P0018118 Lypla1 protein_coding protein_coding MGP_WSBEiJ_T0018119.1 MGP_WSBEiJ_G0015227.1 mouse_genomes_project 1 1863226 1904192 + MGP_WSBEiJ_P0018119 Lypla1 protein_coding protein_coding MGP_WSBEiJ_T0018120.1 MGP_WSBEiJ_G0015227.1 mouse_genomes_project 1 1894156 1900278 + Lypla1 protein_coding retained_intron MGP_WSBEiJ_T0005883.1 MGP_WSBEiJ_G0004929.1 mouse_genomes_project 1 168142478 168166708 + Gm37184 lincRNA lincRNA MGP_WSBEiJ_T0011686.1 MGP_WSBEiJ_G0009816.1 mouse_genomes_project 1 10593837 10594477 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020724.1 MGP_WSBEiJ_G0015737.1 mouse_genomes_project 1 93645284 93646739 + MGP_WSBEiJ_P0020724 Dusp28 protein_coding protein_coding MGP_WSBEiJ_T0096888.1 MGP_WSBEiJ_G0035569.1 mouse_genomes_project 1 152543315 152543424 - n-R5s218 rRNA rRNA MGP_WSBEiJ_T0000740.1 MGP_WSBEiJ_G0000682.1 mouse_genomes_project 1 186254272 186257516 - TEC TEC MGP_WSBEiJ_T0000435.1 MGP_WSBEiJ_G0000380.1 mouse_genomes_project 1 43053943 43058417 + TEC TEC MGP_WSBEiJ_T0098792.1 MGP_WSBEiJ_G0037455.1 mouse_genomes_project 1 135729826 135729959 + Gm23939 snoRNA snoRNA MGP_WSBEiJ_T0020909.1 MGP_WSBEiJ_G0015775.1 mouse_genomes_project 1 100722214 101489005 + MGP_WSBEiJ_P0020909 Cntnap5b protein_coding protein_coding MGP_WSBEiJ_T0020910.1 MGP_WSBEiJ_G0015775.1 mouse_genomes_project 1 101072618 101490098 + MGP_WSBEiJ_P0020910 Cntnap5b protein_coding protein_coding MGP_WSBEiJ_T0020911.1 MGP_WSBEiJ_G0015775.1 mouse_genomes_project 1 101236018 101371378 + Cntnap5b protein_coding processed_transcript MGP_WSBEiJ_T0022447.1 MGP_WSBEiJ_G0016091.1 mouse_genomes_project 1 167730981 167749219 - MGP_WSBEiJ_P0022447 Blzf1 protein_coding protein_coding MGP_WSBEiJ_T0022448.1 MGP_WSBEiJ_G0016091.1 mouse_genomes_project 1 167732570 167749224 - MGP_WSBEiJ_P0022448 Blzf1 protein_coding protein_coding MGP_WSBEiJ_T0022449.1 MGP_WSBEiJ_G0016091.1 mouse_genomes_project 1 167733311 167749224 - MGP_WSBEiJ_P0022449 Blzf1 protein_coding protein_coding MGP_WSBEiJ_T0022450.1 MGP_WSBEiJ_G0016091.1 mouse_genomes_project 1 167741275 167749007 - Blzf1 protein_coding processed_transcript MGP_WSBEiJ_T0022452.1 MGP_WSBEiJ_G0016091.1 mouse_genomes_project 1 167746936 167749206 - Blzf1 protein_coding retained_intron MGP_WSBEiJ_T0002878.1 MGP_WSBEiJ_G0002712.1 mouse_genomes_project 1 173808906 173811913 + antisense antisense MGP_WSBEiJ_T0002879.1 MGP_WSBEiJ_G0002712.1 mouse_genomes_project 1 173808906 173811046 + antisense antisense MGP_WSBEiJ_T0002791.1 MGP_WSBEiJ_G0002647.1 mouse_genomes_project 1 94060618 94073166 + Gm28535 antisense antisense MGP_WSBEiJ_T0022784.1 MGP_WSBEiJ_G0016164.1 mouse_genomes_project 1 175002365 175016509 + MGP_WSBEiJ_P0022784 Pfdn2 protein_coding protein_coding MGP_WSBEiJ_T0022785.1 MGP_WSBEiJ_G0016164.1 mouse_genomes_project 1 175013638 175015219 + Pfdn2 protein_coding processed_transcript MGP_WSBEiJ_T0000711.1 MGP_WSBEiJ_G0000654.1 mouse_genomes_project 1 176278401 176279968 + TEC TEC MGP_WSBEiJ_T0098777.1 MGP_WSBEiJ_G0037440.1 mouse_genomes_project 1 103127073 103127205 - Gm24122 snoRNA snoRNA MGP_WSBEiJ_T0005804.1 MGP_WSBEiJ_G0004864.1 mouse_genomes_project 1 122863820 122869217 - 2210011K15Rik lincRNA lincRNA MGP_WSBEiJ_T0000403.1 MGP_WSBEiJ_G0000349.1 mouse_genomes_project 1 30629503 30631973 + TEC TEC MGP_WSBEiJ_T0020950.1 MGP_WSBEiJ_G0015784.1 mouse_genomes_project 1 107873841 107912944 - MGP_WSBEiJ_P0020950 Kdsr protein_coding protein_coding MGP_WSBEiJ_T0020951.1 MGP_WSBEiJ_G0015784.1 mouse_genomes_project 1 107900027 107912916 - Kdsr protein_coding retained_intron MGP_WSBEiJ_T0020952.1 MGP_WSBEiJ_G0015784.1 mouse_genomes_project 1 107910318 107912900 - Kdsr protein_coding retained_intron MGP_WSBEiJ_T0005714.1 MGP_WSBEiJ_G0004790.1 mouse_genomes_project 1 77430705 77432554 + Gm28386 lincRNA lincRNA MGP_WSBEiJ_T0019029.1 MGP_WSBEiJ_G0015407.1 mouse_genomes_project 1 43855475 43987581 - MGP_WSBEiJ_P0019029 Col5a2 protein_coding protein_coding MGP_WSBEiJ_T0019030.1 MGP_WSBEiJ_G0015407.1 mouse_genomes_project 1 43870227 43874794 - Col5a2 protein_coding retained_intron MGP_WSBEiJ_T0019031.1 MGP_WSBEiJ_G0015407.1 mouse_genomes_project 1 43894764 43987581 - Col5a2 protein_coding retained_intron MGP_WSBEiJ_T0019032.1 MGP_WSBEiJ_G0015407.1 mouse_genomes_project 1 43898003 43902934 - Col5a2 protein_coding retained_intron MGP_WSBEiJ_T0000531.1 MGP_WSBEiJ_G0000476.1 mouse_genomes_project 1 90380776 90382821 + TEC TEC MGP_WSBEiJ_T0018524.1 MGP_WSBEiJ_G0015310.1 mouse_genomes_project 1 28693447 28703463 - MGP_WSBEiJ_P0018524 Ptp4a1 protein_coding protein_coding MGP_WSBEiJ_T0018525.1 MGP_WSBEiJ_G0015310.1 mouse_genomes_project 1 28699857 28703002 - Ptp4a1 protein_coding processed_transcript MGP_WSBEiJ_T0018526.1 MGP_WSBEiJ_G0015310.1 mouse_genomes_project 1 28700227 28703280 - MGP_WSBEiJ_P0018526 Ptp4a1 protein_coding protein_coding MGP_WSBEiJ_T0019425.1 MGP_WSBEiJ_G0015483.1 mouse_genomes_project 1 58715119 58801925 - protein_coding processed_transcript MGP_WSBEiJ_T0019430.1 MGP_WSBEiJ_G0015483.1 mouse_genomes_project 1 58773469 58801967 - protein_coding retained_intron MGP_WSBEiJ_T0022982.1 MGP_WSBEiJ_G0016225.1 mouse_genomes_project 1 177969722 177970661 + MGP_WSBEiJ_P0022982 Olfr432 protein_coding protein_coding MGP_WSBEiJ_T0098768.1 MGP_WSBEiJ_G0037431.1 mouse_genomes_project 1 84081749 84081873 + Gm24555 snoRNA snoRNA MGP_WSBEiJ_T0022920.1 MGP_WSBEiJ_G0016196.1 mouse_genomes_project 1 176263986 176270489 + Tagln2 protein_coding retained_intron MGP_WSBEiJ_T0022921.1 MGP_WSBEiJ_G0016196.1 mouse_genomes_project 1 176263986 176271933 + MGP_WSBEiJ_P0022921 Tagln2 protein_coding protein_coding MGP_WSBEiJ_T0022922.1 MGP_WSBEiJ_G0016196.1 mouse_genomes_project 1 176264184 176270407 + MGP_WSBEiJ_P0022922 Tagln2 protein_coding protein_coding MGP_WSBEiJ_T0022923.1 MGP_WSBEiJ_G0016196.1 mouse_genomes_project 1 176265208 176271308 + MGP_WSBEiJ_P0022923 Tagln2 protein_coding protein_coding MGP_WSBEiJ_T0002905.1 MGP_WSBEiJ_G0002734.1 mouse_genomes_project 1 189654353 189655970 + 2010103J01Rik antisense antisense MGP_WSBEiJ_T0011846.1 MGP_WSBEiJ_G0009976.1 mouse_genomes_project 1 61928163 61929249 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009366.1 MGP_WSBEiJ_G0007523.1 mouse_genomes_project 1 86585776 86585923 - Mir3535 miRNA miRNA MGP_WSBEiJ_T0023199.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184834407 184884463 + MGP_WSBEiJ_P0023199 Lin9 protein_coding protein_coding MGP_WSBEiJ_T0023200.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184834536 184884470 + MGP_WSBEiJ_P0023200 Lin9 protein_coding protein_coding MGP_WSBEiJ_T0023201.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184834610 184875562 + Lin9 protein_coding retained_intron MGP_WSBEiJ_T0023202.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184834612 184842467 + Lin9 protein_coding processed_transcript MGP_WSBEiJ_T0023203.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184834617 184884463 + MGP_WSBEiJ_P0023203 Lin9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023204.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184834623 184869459 + Lin9 protein_coding retained_intron MGP_WSBEiJ_T0023205.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184856045 184868506 + MGP_WSBEiJ_P0023205 Lin9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023206.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184873515 184882870 + Lin9 protein_coding retained_intron MGP_WSBEiJ_T0023207.1 MGP_WSBEiJ_G0016277.1 mouse_genomes_project 1 184874822 184884463 + Lin9 protein_coding retained_intron MGP_WSBEiJ_T0022113.1 MGP_WSBEiJ_G0016028.1 mouse_genomes_project 1 159209376 159295674 - MGP_WSBEiJ_P0022113 Fam163a protein_coding protein_coding MGP_WSBEiJ_T0020802.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94240982 94263484 + MGP_WSBEiJ_P0020802 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0020803.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94240985 94264871 + MGP_WSBEiJ_P0020803 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0020804.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241001 94274194 + MGP_WSBEiJ_P0020804 Sept2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020805.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241013 94262355 + Sept2 protein_coding retained_intron MGP_WSBEiJ_T0020806.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241027 94261961 + MGP_WSBEiJ_P0020806 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0020807.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241051 94244391 + Sept2 protein_coding retained_intron MGP_WSBEiJ_T0020808.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241051 94264875 + MGP_WSBEiJ_P0020808 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0020809.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241100 94264900 + MGP_WSBEiJ_P0020809 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0020810.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241212 94263402 + MGP_WSBEiJ_P0020810 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0020811.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241215 94263484 + MGP_WSBEiJ_P0020811 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0020812.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94241465 94264898 + MGP_WSBEiJ_P0020812 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0020813.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94269562 94271389 + Sept2 protein_coding retained_intron MGP_WSBEiJ_T0020814.1 MGP_WSBEiJ_G0015752.1 mouse_genomes_project 1 94269937 94271716 + MGP_WSBEiJ_P0020814 Sept2 protein_coding protein_coding MGP_WSBEiJ_T0022963.1 MGP_WSBEiJ_G0016215.1 mouse_genomes_project 1 177147557 177263824 + MGP_WSBEiJ_P0022963 Aim2 protein_coding protein_coding MGP_WSBEiJ_T0022964.1 MGP_WSBEiJ_G0016215.1 mouse_genomes_project 1 177216466 177225035 + Aim2 protein_coding processed_transcript MGP_WSBEiJ_T0022965.1 MGP_WSBEiJ_G0016215.1 mouse_genomes_project 1 177217882 177256963 + MGP_WSBEiJ_P0022965 Aim2 protein_coding protein_coding MGP_WSBEiJ_T0022966.1 MGP_WSBEiJ_G0016215.1 mouse_genomes_project 1 177252228 177252853 + MGP_WSBEiJ_P0022966 Aim2 protein_coding protein_coding MGP_WSBEiJ_T0022967.1 MGP_WSBEiJ_G0016215.1 mouse_genomes_project 1 177252611 177259869 + Aim2 protein_coding processed_transcript MGP_WSBEiJ_T0022968.1 MGP_WSBEiJ_G0016215.1 mouse_genomes_project 1 177252611 177263816 + MGP_WSBEiJ_P0022968 Aim2 protein_coding protein_coding MGP_WSBEiJ_T0022969.1 MGP_WSBEiJ_G0016215.1 mouse_genomes_project 1 177252745 177253423 + Aim2 protein_coding processed_transcript MGP_WSBEiJ_T0019858.1 MGP_WSBEiJ_G0015566.1 mouse_genomes_project 1 74257924 74285355 + MGP_WSBEiJ_P0019858 Vil1 protein_coding protein_coding MGP_WSBEiJ_T0019859.1 MGP_WSBEiJ_G0015566.1 mouse_genomes_project 1 74268828 74272789 + MGP_WSBEiJ_P0019859 Vil1 protein_coding protein_coding MGP_WSBEiJ_T0019860.1 MGP_WSBEiJ_G0015566.1 mouse_genomes_project 1 74271191 74272782 + Vil1 protein_coding retained_intron MGP_WSBEiJ_T0019861.1 MGP_WSBEiJ_G0015566.1 mouse_genomes_project 1 74273456 74275736 + Vil1 protein_coding retained_intron MGP_WSBEiJ_T0011929.1 MGP_WSBEiJ_G0010059.1 mouse_genomes_project 1 102771440 102772170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009371.1 MGP_WSBEiJ_G0007528.1 mouse_genomes_project 1 94026242 94026304 + Mir6901 miRNA miRNA MGP_WSBEiJ_T0002829.1 MGP_WSBEiJ_G0002672.1 mouse_genomes_project 1 137400084 137402913 + antisense antisense MGP_WSBEiJ_T0019498.1 MGP_WSBEiJ_G0015493.1 mouse_genomes_project 1 59672530 59758093 - MGP_WSBEiJ_P0019498 protein_coding protein_coding MGP_WSBEiJ_T0019499.1 MGP_WSBEiJ_G0015493.1 mouse_genomes_project 1 59673452 59689760 - MGP_WSBEiJ_P0019499 protein_coding protein_coding MGP_WSBEiJ_T0019500.1 MGP_WSBEiJ_G0015493.1 mouse_genomes_project 1 59673503 59758079 - MGP_WSBEiJ_P0019500 protein_coding protein_coding MGP_WSBEiJ_T0019501.1 MGP_WSBEiJ_G0015493.1 mouse_genomes_project 1 59680881 59758083 - MGP_WSBEiJ_P0019501 protein_coding protein_coding MGP_WSBEiJ_T0019502.1 MGP_WSBEiJ_G0015493.1 mouse_genomes_project 1 59683528 59686491 - protein_coding retained_intron MGP_WSBEiJ_T0019503.1 MGP_WSBEiJ_G0015493.1 mouse_genomes_project 1 59691811 59693474 - protein_coding retained_intron MGP_WSBEiJ_T0019504.1 MGP_WSBEiJ_G0015493.1 mouse_genomes_project 1 59703993 59713530 - protein_coding retained_intron MGP_WSBEiJ_T0019505.1 MGP_WSBEiJ_G0015493.1 mouse_genomes_project 1 59716912 59758418 - MGP_WSBEiJ_P0019505 protein_coding protein_coding MGP_WSBEiJ_T0021902.1 MGP_WSBEiJ_G0015988.1 mouse_genomes_project 1 154245568 154265525 + MGP_WSBEiJ_P0021902 Ivns1abp protein_coding protein_coding MGP_WSBEiJ_T0021903.1 MGP_WSBEiJ_G0015988.1 mouse_genomes_project 1 154245600 154257894 + MGP_WSBEiJ_P0021903 Ivns1abp protein_coding protein_coding MGP_WSBEiJ_T0021904.1 MGP_WSBEiJ_G0015988.1 mouse_genomes_project 1 154245609 154265518 + MGP_WSBEiJ_P0021904 Ivns1abp protein_coding protein_coding MGP_WSBEiJ_T0021905.1 MGP_WSBEiJ_G0015988.1 mouse_genomes_project 1 154245669 154264468 + MGP_WSBEiJ_P0021905 Ivns1abp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021906.1 MGP_WSBEiJ_G0015988.1 mouse_genomes_project 1 154262350 154263138 + MGP_WSBEiJ_P0021906 Ivns1abp protein_coding protein_coding MGP_WSBEiJ_T0011054.1 MGP_WSBEiJ_G0009211.1 mouse_genomes_project 1 62465959 62466135 + Gm27390 misc_RNA misc_RNA MGP_WSBEiJ_T0005573.1 MGP_WSBEiJ_G0004686.1 mouse_genomes_project 1 14447851 14452552 + Gm28784 lincRNA lincRNA MGP_WSBEiJ_T0005651.1 MGP_WSBEiJ_G0004743.1 mouse_genomes_project 1 54938995 54940215 + 1700003I22Rik lincRNA lincRNA MGP_WSBEiJ_T0005652.1 MGP_WSBEiJ_G0004743.1 mouse_genomes_project 1 54939040 54940149 + 1700003I22Rik lincRNA lincRNA MGP_WSBEiJ_T0011726.1 MGP_WSBEiJ_G0009856.1 mouse_genomes_project 1 26613289 26613593 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005668.1 MGP_WSBEiJ_G0004757.1 mouse_genomes_project 1 60705880 60706958 + Gm28449 lincRNA lincRNA MGP_WSBEiJ_T0002873.1 MGP_WSBEiJ_G0002708.1 mouse_genomes_project 1 169806197 169809041 - 5330438I03Rik antisense antisense MGP_WSBEiJ_T0012124.1 MGP_WSBEiJ_G0010254.1 mouse_genomes_project 1 191491309 191491634 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018770.1 MGP_WSBEiJ_G0015353.1 mouse_genomes_project 1 35574472 35675616 - MGP_WSBEiJ_P0018770 Mgat4a protein_coding protein_coding MGP_WSBEiJ_T0018771.1 MGP_WSBEiJ_G0015353.1 mouse_genomes_project 1 35576857 35680242 - MGP_WSBEiJ_P0018771 Mgat4a protein_coding protein_coding MGP_WSBEiJ_T0018772.1 MGP_WSBEiJ_G0015353.1 mouse_genomes_project 1 35597355 35631743 - MGP_WSBEiJ_P0018772 Mgat4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018773.1 MGP_WSBEiJ_G0015353.1 mouse_genomes_project 1 35597358 35631705 - MGP_WSBEiJ_P0018773 Mgat4a protein_coding protein_coding MGP_WSBEiJ_T0018774.1 MGP_WSBEiJ_G0015353.1 mouse_genomes_project 1 35631335 35634448 - Mgat4a protein_coding retained_intron MGP_WSBEiJ_T0018775.1 MGP_WSBEiJ_G0015353.1 mouse_genomes_project 1 35672421 35675455 - Mgat4a protein_coding retained_intron MGP_WSBEiJ_T0000558.1 MGP_WSBEiJ_G0000503.1 mouse_genomes_project 1 113150021 113150423 + TEC TEC MGP_WSBEiJ_T0000391.1 MGP_WSBEiJ_G0000337.1 mouse_genomes_project 1 23310231 23314781 - TEC TEC MGP_WSBEiJ_T0005631.1 MGP_WSBEiJ_G0004727.1 mouse_genomes_project 1 41749425 41805504 - Gm29040 lincRNA lincRNA MGP_WSBEiJ_T0002881.1 MGP_WSBEiJ_G0002714.1 mouse_genomes_project 1 175156472 175160032 - B930036N10Rik antisense antisense MGP_WSBEiJ_T0002882.1 MGP_WSBEiJ_G0002714.1 mouse_genomes_project 1 175158729 175160032 - B930036N10Rik antisense antisense MGP_WSBEiJ_T0011813.1 MGP_WSBEiJ_G0009943.1 mouse_genomes_project 1 53942939 53943745 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011953.1 MGP_WSBEiJ_G0010083.1 mouse_genomes_project 1 111831679 111832492 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020412.1 MGP_WSBEiJ_G0015666.1 mouse_genomes_project 1 86845648 86873330 + MGP_WSBEiJ_P0020412 Cops7b protein_coding protein_coding MGP_WSBEiJ_T0020413.1 MGP_WSBEiJ_G0015666.1 mouse_genomes_project 1 86845682 86851797 + MGP_WSBEiJ_P0020413 Cops7b protein_coding protein_coding MGP_WSBEiJ_T0020414.1 MGP_WSBEiJ_G0015666.1 mouse_genomes_project 1 86849604 86870433 + MGP_WSBEiJ_P0020414 Cops7b protein_coding protein_coding MGP_WSBEiJ_T0020415.1 MGP_WSBEiJ_G0015666.1 mouse_genomes_project 1 86849635 86870259 + MGP_WSBEiJ_P0020415 Cops7b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020416.1 MGP_WSBEiJ_G0015666.1 mouse_genomes_project 1 86849646 86870910 + MGP_WSBEiJ_P0020416 Cops7b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020417.1 MGP_WSBEiJ_G0015666.1 mouse_genomes_project 1 86859228 86863630 + Cops7b protein_coding processed_transcript MGP_WSBEiJ_T0002709.1 MGP_WSBEiJ_G0002582.1 mouse_genomes_project 1 32808620 32811169 - Gm38336 antisense antisense MGP_WSBEiJ_T0002786.1 MGP_WSBEiJ_G0002642.1 mouse_genomes_project 1 93293564 93293940 - 1700054K02Rik antisense antisense MGP_WSBEiJ_T0020057.1 MGP_WSBEiJ_G0015598.1 mouse_genomes_project 1 75108289 75114459 - MGP_WSBEiJ_P0020057 Resp18 protein_coding protein_coding MGP_WSBEiJ_T0020058.1 MGP_WSBEiJ_G0015598.1 mouse_genomes_project 1 75108291 75110350 - Resp18 protein_coding retained_intron MGP_WSBEiJ_T0020059.1 MGP_WSBEiJ_G0015598.1 mouse_genomes_project 1 75108401 75114360 - MGP_WSBEiJ_P0020059 Resp18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020060.1 MGP_WSBEiJ_G0015598.1 mouse_genomes_project 1 75110156 75114328 - Resp18 protein_coding retained_intron MGP_WSBEiJ_T0009417.1 MGP_WSBEiJ_G0007574.1 mouse_genomes_project 1 198213137 198213205 - Mir205 miRNA miRNA MGP_WSBEiJ_T0018618.1 MGP_WSBEiJ_G0015329.1 mouse_genomes_project 1 32812485 32842206 - MGP_WSBEiJ_P0018618 Fam168b protein_coding protein_coding MGP_WSBEiJ_T0018619.1 MGP_WSBEiJ_G0015329.1 mouse_genomes_project 1 32812492 32842221 - MGP_WSBEiJ_P0018619 Fam168b protein_coding protein_coding MGP_WSBEiJ_T0018620.1 MGP_WSBEiJ_G0015329.1 mouse_genomes_project 1 32816491 32842120 - MGP_WSBEiJ_P0018620 Fam168b protein_coding protein_coding MGP_WSBEiJ_T0018621.1 MGP_WSBEiJ_G0015329.1 mouse_genomes_project 1 32816608 32842141 - MGP_WSBEiJ_P0018621 Fam168b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018622.1 MGP_WSBEiJ_G0015329.1 mouse_genomes_project 1 32817265 32842190 - MGP_WSBEiJ_P0018622 Fam168b protein_coding protein_coding MGP_WSBEiJ_T0018623.1 MGP_WSBEiJ_G0015329.1 mouse_genomes_project 1 32818868 32842169 - Fam168b protein_coding processed_transcript MGP_WSBEiJ_T0018624.1 MGP_WSBEiJ_G0015329.1 mouse_genomes_project 1 32818955 32842160 - MGP_WSBEiJ_P0018624 Fam168b protein_coding protein_coding MGP_WSBEiJ_T0018625.1 MGP_WSBEiJ_G0015329.1 mouse_genomes_project 1 32827947 32842221 - Fam168b protein_coding retained_intron MGP_WSBEiJ_T0022004.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156671108 156722567 + MGP_WSBEiJ_P0022004 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022005.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156680262 156713336 + MGP_WSBEiJ_P0022005 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022006.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156683487 156715253 + MGP_WSBEiJ_P0022006 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022007.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156684146 156715045 + MGP_WSBEiJ_P0022007 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022008.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156684184 156717808 + MGP_WSBEiJ_P0022008 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022009.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156684465 156713386 + MGP_WSBEiJ_P0022009 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022010.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156684529 156713391 + MGP_WSBEiJ_P0022010 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022011.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156684545 156715214 + MGP_WSBEiJ_P0022011 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022012.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156684581 156719911 + MGP_WSBEiJ_P0022012 Rgs8 protein_coding protein_coding MGP_WSBEiJ_T0022013.1 MGP_WSBEiJ_G0016008.1 mouse_genomes_project 1 156686358 156689643 + Rgs8 protein_coding processed_transcript MGP_WSBEiJ_T0011962.1 MGP_WSBEiJ_G0010092.1 mouse_genomes_project 1 114201278 114203422 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021733.1 MGP_WSBEiJ_G0015955.1 mouse_genomes_project 1 138966287 138971440 + MGP_WSBEiJ_P0021733 Zfp281 protein_coding protein_coding MGP_WSBEiJ_T0021734.1 MGP_WSBEiJ_G0015955.1 mouse_genomes_project 1 138966287 138971440 + MGP_WSBEiJ_P0021734 Zfp281 protein_coding protein_coding MGP_WSBEiJ_T0097183.1 MGP_WSBEiJ_G0035864.1 mouse_genomes_project 1 88124409 88124681 + Gm25395 scaRNA scaRNA MGP_WSBEiJ_T0000644.1 MGP_WSBEiJ_G0000587.1 mouse_genomes_project 1 152228177 152229632 - TEC TEC MGP_WSBEiJ_T0021393.1 MGP_WSBEiJ_G0015883.1 mouse_genomes_project 1 134462970 134517007 + MGP_WSBEiJ_P0021393 Dstyk protein_coding protein_coding MGP_WSBEiJ_T0021394.1 MGP_WSBEiJ_G0015883.1 mouse_genomes_project 1 134463019 134514139 + MGP_WSBEiJ_P0021394 Dstyk protein_coding protein_coding MGP_WSBEiJ_T0021395.1 MGP_WSBEiJ_G0015883.1 mouse_genomes_project 1 134463792 134479377 + Dstyk protein_coding processed_transcript MGP_WSBEiJ_T0021396.1 MGP_WSBEiJ_G0015883.1 mouse_genomes_project 1 134496916 134499118 + MGP_WSBEiJ_P0021396 Dstyk protein_coding protein_coding MGP_WSBEiJ_T0021397.1 MGP_WSBEiJ_G0015883.1 mouse_genomes_project 1 134502094 134505465 + Dstyk protein_coding retained_intron MGP_WSBEiJ_T0021398.1 MGP_WSBEiJ_G0015883.1 mouse_genomes_project 1 134512455 134513403 + Dstyk protein_coding retained_intron MGP_WSBEiJ_T0019189.1 MGP_WSBEiJ_G0015439.1 mouse_genomes_project 1 53114969 53136597 + Ccdc150 protein_coding retained_intron MGP_WSBEiJ_T0019190.1 MGP_WSBEiJ_G0015439.1 mouse_genomes_project 1 53114969 53226156 + MGP_WSBEiJ_P0019190 Ccdc150 protein_coding protein_coding MGP_WSBEiJ_T0019191.1 MGP_WSBEiJ_G0015439.1 mouse_genomes_project 1 53115008 53225899 + MGP_WSBEiJ_P0019191 Ccdc150 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019192.1 MGP_WSBEiJ_G0015439.1 mouse_genomes_project 1 53182923 53226037 + Ccdc150 protein_coding processed_transcript MGP_WSBEiJ_T0019193.1 MGP_WSBEiJ_G0015439.1 mouse_genomes_project 1 53211692 53226032 + Ccdc150 protein_coding retained_intron MGP_WSBEiJ_T0005619.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41053578 41162576 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005620.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113276 41159954 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005621.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113282 41132656 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005622.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113283 41159979 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005623.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113283 41116757 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005624.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113283 41162593 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005625.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113283 41162593 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005626.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113284 41133337 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005627.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113284 41159919 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005628.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41113461 41132577 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0005629.1 MGP_WSBEiJ_G0004725.1 mouse_genomes_project 1 41159851 41162593 - Pantr1 lincRNA lincRNA MGP_WSBEiJ_T0019001.1 MGP_WSBEiJ_G0015402.1 mouse_genomes_project 1 42665909 42673544 + MGP_WSBEiJ_P0019001 Bivm protein_coding protein_coding MGP_WSBEiJ_T0019002.1 MGP_WSBEiJ_G0015402.1 mouse_genomes_project 1 42665952 42673306 + Bivm protein_coding processed_transcript MGP_WSBEiJ_T0019003.1 MGP_WSBEiJ_G0015402.1 mouse_genomes_project 1 42666115 42691215 + MGP_WSBEiJ_P0019003 Bivm protein_coding protein_coding MGP_WSBEiJ_T0019004.1 MGP_WSBEiJ_G0015402.1 mouse_genomes_project 1 42666461 42673325 + Bivm protein_coding processed_transcript MGP_WSBEiJ_T0019005.1 MGP_WSBEiJ_G0015402.1 mouse_genomes_project 1 42666916 42691475 + MGP_WSBEiJ_P0019005 Bivm protein_coding protein_coding MGP_WSBEiJ_T0019006.1 MGP_WSBEiJ_G0015402.1 mouse_genomes_project 1 42666927 42673385 + MGP_WSBEiJ_P0019006 Bivm protein_coding protein_coding MGP_WSBEiJ_T0022493.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168972444 169059752 + MGP_WSBEiJ_P0022493 Adcy10 protein_coding protein_coding MGP_WSBEiJ_T0022494.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168972444 169060817 + MGP_WSBEiJ_P0022494 Adcy10 protein_coding protein_coding MGP_WSBEiJ_T0022495.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168972444 169060457 + MGP_WSBEiJ_P0022495 Adcy10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022496.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168972450 169059751 + MGP_WSBEiJ_P0022496 Adcy10 protein_coding protein_coding MGP_WSBEiJ_T0022497.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168972454 168976792 + Adcy10 protein_coding processed_transcript MGP_WSBEiJ_T0022498.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168972472 169059749 + MGP_WSBEiJ_P0022498 Adcy10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022499.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168991436 169051656 + MGP_WSBEiJ_P0022499 Adcy10 protein_coding protein_coding MGP_WSBEiJ_T0022500.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168991452 169059583 + MGP_WSBEiJ_P0022500 Adcy10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022501.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 168998862 169025845 + Adcy10 protein_coding retained_intron MGP_WSBEiJ_T0022502.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 169006543 169008363 + Adcy10 protein_coding retained_intron MGP_WSBEiJ_T0022503.1 MGP_WSBEiJ_G0016102.1 mouse_genomes_project 1 169025668 169035238 + Adcy10 protein_coding processed_transcript MGP_WSBEiJ_T0011800.1 MGP_WSBEiJ_G0009930.1 mouse_genomes_project 1 48891698 48892431 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009418.1 MGP_WSBEiJ_G0007575.1 mouse_genomes_project 1 199561465 199561529 + Mir3962 miRNA miRNA MGP_WSBEiJ_T0000527.1 MGP_WSBEiJ_G0000472.1 mouse_genomes_project 1 88216276 88217415 + TEC TEC MGP_WSBEiJ_T0022988.1 MGP_WSBEiJ_G0016230.1 mouse_genomes_project 1 178066779 178067726 + MGP_WSBEiJ_P0022988 Olfr424 protein_coding protein_coding MGP_WSBEiJ_T0021094.1 MGP_WSBEiJ_G0015816.1 mouse_genomes_project 1 121587739 121659583 + MGP_WSBEiJ_P0021094 3110009E18Rik protein_coding protein_coding MGP_WSBEiJ_T0021095.1 MGP_WSBEiJ_G0015816.1 mouse_genomes_project 1 121587747 121659583 + MGP_WSBEiJ_P0021095 3110009E18Rik protein_coding protein_coding MGP_WSBEiJ_T0021096.1 MGP_WSBEiJ_G0015816.1 mouse_genomes_project 1 121587752 121659583 + MGP_WSBEiJ_P0021096 3110009E18Rik protein_coding protein_coding MGP_WSBEiJ_T0021097.1 MGP_WSBEiJ_G0015816.1 mouse_genomes_project 1 121618071 121634902 + 3110009E18Rik protein_coding processed_transcript MGP_WSBEiJ_T0021098.1 MGP_WSBEiJ_G0015816.1 mouse_genomes_project 1 121618143 121638952 + MGP_WSBEiJ_P0021098 3110009E18Rik protein_coding protein_coding MGP_WSBEiJ_T0021099.1 MGP_WSBEiJ_G0015816.1 mouse_genomes_project 1 121628024 121645329 + 3110009E18Rik protein_coding processed_transcript MGP_WSBEiJ_T0011993.1 MGP_WSBEiJ_G0010123.1 mouse_genomes_project 1 125387176 125388369 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002718.1 MGP_WSBEiJ_G0002590.1 mouse_genomes_project 1 36419038 36425978 + antisense antisense MGP_WSBEiJ_T0009359.1 MGP_WSBEiJ_G0007516.1 mouse_genomes_project 1 77412252 77412368 - Mir6352 miRNA miRNA MGP_WSBEiJ_T0019940.1 MGP_WSBEiJ_G0015581.1 mouse_genomes_project 1 74778412 74781676 - MGP_WSBEiJ_P0019940 Cryba2 protein_coding protein_coding MGP_WSBEiJ_T0019941.1 MGP_WSBEiJ_G0015581.1 mouse_genomes_project 1 74779046 74781425 - MGP_WSBEiJ_P0019941 Cryba2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012063.1 MGP_WSBEiJ_G0010193.1 mouse_genomes_project 1 160791450 160792055 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005852.1 MGP_WSBEiJ_G0004905.1 mouse_genomes_project 1 154664684 154670755 - 2810414N06Rik lincRNA lincRNA MGP_WSBEiJ_T0021619.1 MGP_WSBEiJ_G0015935.1 mouse_genomes_project 1 137651077 137657837 - MGP_WSBEiJ_P0021619 Shisa4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021620.1 MGP_WSBEiJ_G0015935.1 mouse_genomes_project 1 137653927 137656321 - Shisa4 protein_coding retained_intron MGP_WSBEiJ_T0021621.1 MGP_WSBEiJ_G0015935.1 mouse_genomes_project 1 137656763 137657953 - Shisa4 protein_coding retained_intron MGP_WSBEiJ_T0019928.1 MGP_WSBEiJ_G0015576.1 mouse_genomes_project 1 74608192 74618222 - MGP_WSBEiJ_P0019928 Prkag3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019929.1 MGP_WSBEiJ_G0015576.1 mouse_genomes_project 1 74609479 74618488 - MGP_WSBEiJ_P0019929 Prkag3 protein_coding protein_coding MGP_WSBEiJ_T0019930.1 MGP_WSBEiJ_G0015576.1 mouse_genomes_project 1 74609479 74617844 - MGP_WSBEiJ_P0019930 Prkag3 protein_coding protein_coding MGP_WSBEiJ_T0019931.1 MGP_WSBEiJ_G0015576.1 mouse_genomes_project 1 74610741 74618134 - MGP_WSBEiJ_P0019931 Prkag3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019932.1 MGP_WSBEiJ_G0015576.1 mouse_genomes_project 1 74616784 74618171 - MGP_WSBEiJ_P0019932 Prkag3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019136.1 MGP_WSBEiJ_G0015426.1 mouse_genomes_project 1 51575263 51609134 - MGP_WSBEiJ_P0019136 Inpp1 protein_coding protein_coding MGP_WSBEiJ_T0019137.1 MGP_WSBEiJ_G0015426.1 mouse_genomes_project 1 51580301 51590292 - MGP_WSBEiJ_P0019137 Inpp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019138.1 MGP_WSBEiJ_G0015426.1 mouse_genomes_project 1 51580689 51585717 - Inpp1 protein_coding retained_intron MGP_WSBEiJ_T0019139.1 MGP_WSBEiJ_G0015426.1 mouse_genomes_project 1 51585333 51609014 - MGP_WSBEiJ_P0019139 Inpp1 protein_coding protein_coding MGP_WSBEiJ_T0019140.1 MGP_WSBEiJ_G0015426.1 mouse_genomes_project 1 51587638 51608897 - Inpp1 protein_coding retained_intron MGP_WSBEiJ_T0019141.1 MGP_WSBEiJ_G0015426.1 mouse_genomes_project 1 51587725 51591175 - MGP_WSBEiJ_P0019141 Inpp1 protein_coding protein_coding MGP_WSBEiJ_T0022868.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175894956 175948004 + MGP_WSBEiJ_P0022868 Dcaf8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022869.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175894961 175939604 + Dcaf8 protein_coding retained_intron MGP_WSBEiJ_T0022870.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175894990 175948716 + MGP_WSBEiJ_P0022870 Dcaf8 protein_coding protein_coding MGP_WSBEiJ_T0022871.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175895012 175940831 + Dcaf8 protein_coding retained_intron MGP_WSBEiJ_T0022872.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175895014 175948675 + MGP_WSBEiJ_P0022872 Dcaf8 protein_coding protein_coding MGP_WSBEiJ_T0022873.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175895050 175949598 + MGP_WSBEiJ_P0022873 Dcaf8 protein_coding protein_coding MGP_WSBEiJ_T0022874.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175895818 175940831 + Dcaf8 protein_coding retained_intron MGP_WSBEiJ_T0022875.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175920900 175923669 + Dcaf8 protein_coding retained_intron MGP_WSBEiJ_T0022876.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175921004 175943606 + MGP_WSBEiJ_P0022876 Dcaf8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022877.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175925984 175931377 + Dcaf8 protein_coding retained_intron MGP_WSBEiJ_T0022878.1 MGP_WSBEiJ_G0016185.1 mouse_genomes_project 1 175938403 175950215 + MGP_WSBEiJ_P0022878 Dcaf8 protein_coding protein_coding MGP_WSBEiJ_T0009370.1 MGP_WSBEiJ_G0007527.1 mouse_genomes_project 1 93584026 93584092 + Mir149 miRNA miRNA MGP_WSBEiJ_T0020231.1 MGP_WSBEiJ_G0015628.1 mouse_genomes_project 1 82328355 82331177 + MGP_WSBEiJ_P0020231 Gm9747 protein_coding protein_coding MGP_WSBEiJ_T0100197.1 MGP_WSBEiJ_G0038760.1 mouse_genomes_project 1 15367297 15392731 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100198.1 MGP_WSBEiJ_G0038760.1 mouse_genomes_project 1 15381532 15392210 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0098812.1 MGP_WSBEiJ_G0037475.1 mouse_genomes_project 1 164398307 164398384 + Snord80 snoRNA snoRNA MGP_WSBEiJ_T0022027.1 MGP_WSBEiJ_G0016012.1 mouse_genomes_project 1 156884688 156939174 - MGP_WSBEiJ_P0022027 Teddm2 protein_coding protein_coding MGP_WSBEiJ_T0022028.1 MGP_WSBEiJ_G0016012.1 mouse_genomes_project 1 156884688 156886344 - MGP_WSBEiJ_P0022028 Teddm2 protein_coding protein_coding MGP_WSBEiJ_T0022030.1 MGP_WSBEiJ_G0016012.1 mouse_genomes_project 1 156936051 156939194 - Teddm2 protein_coding retained_intron MGP_WSBEiJ_T0022411.1 MGP_WSBEiJ_G0016080.1 mouse_genomes_project 1 167116046 167134230 - MGP_WSBEiJ_P0022411 Mettl11b protein_coding protein_coding MGP_WSBEiJ_T0022412.1 MGP_WSBEiJ_G0016080.1 mouse_genomes_project 1 167116789 167134230 - MGP_WSBEiJ_P0022412 Mettl11b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012043.1 MGP_WSBEiJ_G0010173.1 mouse_genomes_project 1 152987016 152987618 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097231.1 MGP_WSBEiJ_G0035912.1 mouse_genomes_project 1 679306 690321 - Gm19938 sense_intronic sense_intronic MGP_WSBEiJ_T0011847.1 MGP_WSBEiJ_G0009977.1 mouse_genomes_project 1 62318713 62319081 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097254.1 MGP_WSBEiJ_G0035934.1 mouse_genomes_project 1 155826311 155828072 - Gm28791 sense_intronic sense_intronic MGP_WSBEiJ_T0021108.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122810830 122841809 - MGP_WSBEiJ_P0021108 Insig2 protein_coding protein_coding MGP_WSBEiJ_T0021109.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122812319 122813743 - Insig2 protein_coding retained_intron MGP_WSBEiJ_T0021110.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122812350 122836712 - MGP_WSBEiJ_P0021110 Insig2 protein_coding protein_coding MGP_WSBEiJ_T0021111.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122813304 122818762 - Insig2 protein_coding retained_intron MGP_WSBEiJ_T0021112.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122813361 122836684 - MGP_WSBEiJ_P0021112 Insig2 protein_coding protein_coding MGP_WSBEiJ_T0021113.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122813661 122829481 - MGP_WSBEiJ_P0021113 Insig2 protein_coding protein_coding MGP_WSBEiJ_T0021114.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122818192 122826015 - Insig2 protein_coding retained_intron MGP_WSBEiJ_T0021115.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122825950 122836601 - MGP_WSBEiJ_P0021115 Insig2 protein_coding protein_coding MGP_WSBEiJ_T0021116.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122826020 122836607 - MGP_WSBEiJ_P0021116 Insig2 protein_coding protein_coding MGP_WSBEiJ_T0021117.1 MGP_WSBEiJ_G0015821.1 mouse_genomes_project 1 122826047 122841465 - MGP_WSBEiJ_P0021117 Insig2 protein_coding protein_coding MGP_WSBEiJ_T0011713.1 MGP_WSBEiJ_G0009843.1 mouse_genomes_project 1 20793592 20794236 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021809.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146293382 146326180 + Glrx2 protein_coding retained_intron MGP_WSBEiJ_T0021810.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146318503 146326182 + MGP_WSBEiJ_P0021810 Glrx2 protein_coding protein_coding MGP_WSBEiJ_T0021811.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146319031 146322145 + Glrx2 protein_coding processed_transcript MGP_WSBEiJ_T0021812.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146319031 146328807 + MGP_WSBEiJ_P0021812 Glrx2 protein_coding protein_coding MGP_WSBEiJ_T0021813.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146319040 146322511 + Glrx2 protein_coding retained_intron MGP_WSBEiJ_T0021814.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146319084 146322248 + Glrx2 protein_coding processed_transcript MGP_WSBEiJ_T0021815.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146319089 146326182 + MGP_WSBEiJ_P0021815 Glrx2 protein_coding protein_coding MGP_WSBEiJ_T0021816.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146319092 146325005 + MGP_WSBEiJ_P0021816 Glrx2 protein_coding protein_coding MGP_WSBEiJ_T0021817.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146319120 146326715 + MGP_WSBEiJ_P0021817 Glrx2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021818.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146319849 146329110 + MGP_WSBEiJ_P0021818 Glrx2 protein_coding protein_coding MGP_WSBEiJ_T0021819.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146322820 146325070 + Glrx2 protein_coding retained_intron MGP_WSBEiJ_T0021820.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146324388 146326092 + Glrx2 protein_coding retained_intron MGP_WSBEiJ_T0021821.1 MGP_WSBEiJ_G0015972.1 mouse_genomes_project 1 146325376 146326181 + Glrx2 protein_coding processed_transcript MGP_WSBEiJ_T0012005.1 MGP_WSBEiJ_G0010135.1 mouse_genomes_project 1 133646075 133646536 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021646.1 MGP_WSBEiJ_G0015939.1 mouse_genomes_project 1 138068819 138071844 + MGP_WSBEiJ_P0021646 Phlda3 protein_coding protein_coding MGP_WSBEiJ_T0021647.1 MGP_WSBEiJ_G0015939.1 mouse_genomes_project 1 138069834 138071631 + Phlda3 protein_coding processed_transcript MGP_WSBEiJ_T0019256.1 MGP_WSBEiJ_G0015453.1 mouse_genomes_project 1 55728306 55915402 - MGP_WSBEiJ_P0019256 Satb2 protein_coding protein_coding MGP_WSBEiJ_T0019257.1 MGP_WSBEiJ_G0015453.1 mouse_genomes_project 1 55728311 55914757 - MGP_WSBEiJ_P0019257 Satb2 protein_coding protein_coding MGP_WSBEiJ_T0019258.1 MGP_WSBEiJ_G0015453.1 mouse_genomes_project 1 55728313 55912721 - MGP_WSBEiJ_P0019258 Satb2 protein_coding protein_coding MGP_WSBEiJ_T0019259.1 MGP_WSBEiJ_G0015453.1 mouse_genomes_project 1 55890093 55912689 - MGP_WSBEiJ_P0019259 Satb2 protein_coding protein_coding MGP_WSBEiJ_T0019260.1 MGP_WSBEiJ_G0015453.1 mouse_genomes_project 1 55912588 55921525 - MGP_WSBEiJ_P0019260 Satb2 protein_coding protein_coding MGP_WSBEiJ_T0000707.1 MGP_WSBEiJ_G0000650.1 mouse_genomes_project 1 172224038 172224648 - TEC TEC MGP_WSBEiJ_T0000774.1 MGP_WSBEiJ_G0000714.1 mouse_genomes_project 1 199403713 199405543 + TEC TEC MGP_WSBEiJ_T0011703.1 MGP_WSBEiJ_G0009833.1 mouse_genomes_project 1 16680192 16682424 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009319.1 MGP_WSBEiJ_G0007476.1 mouse_genomes_project 1 9561743 9561864 + Mir6341 miRNA miRNA MGP_WSBEiJ_T0020968.1 MGP_WSBEiJ_G0015789.1 mouse_genomes_project 1 108484104 108487964 - MGP_WSBEiJ_P0020968 protein_coding protein_coding MGP_WSBEiJ_T0020972.1 MGP_WSBEiJ_G0015789.1 mouse_genomes_project 1 108484125 108487964 - MGP_WSBEiJ_P0020972 protein_coding protein_coding MGP_WSBEiJ_T0000754.1 MGP_WSBEiJ_G0000695.1 mouse_genomes_project 1 191123314 191125195 - TEC TEC MGP_WSBEiJ_T0022413.1 MGP_WSBEiJ_G0016081.1 mouse_genomes_project 1 167185261 167342733 + MGP_WSBEiJ_P0022413 Kifap3 protein_coding protein_coding MGP_WSBEiJ_T0022414.1 MGP_WSBEiJ_G0016081.1 mouse_genomes_project 1 167185261 167342733 + MGP_WSBEiJ_P0022414 Kifap3 protein_coding protein_coding MGP_WSBEiJ_T0023296.1 MGP_WSBEiJ_G0016299.1 mouse_genomes_project 1 186621528 186652272 - MGP_WSBEiJ_P0023296 Fbxo28 protein_coding protein_coding MGP_WSBEiJ_T0023297.1 MGP_WSBEiJ_G0016299.1 mouse_genomes_project 1 186623614 186626814 - Fbxo28 protein_coding retained_intron MGP_WSBEiJ_T0023298.1 MGP_WSBEiJ_G0016299.1 mouse_genomes_project 1 186624889 186652254 - MGP_WSBEiJ_P0023298 Fbxo28 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023299.1 MGP_WSBEiJ_G0016299.1 mouse_genomes_project 1 186625417 186652225 - MGP_WSBEiJ_P0023299 Fbxo28 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023300.1 MGP_WSBEiJ_G0016299.1 mouse_genomes_project 1 186625670 186652283 - MGP_WSBEiJ_P0023300 Fbxo28 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012112.1 MGP_WSBEiJ_G0010242.1 mouse_genomes_project 1 185281851 185282498 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000720.1 MGP_WSBEiJ_G0000663.1 mouse_genomes_project 1 180878563 180879286 + TEC TEC MGP_WSBEiJ_T0021251.1 MGP_WSBEiJ_G0015848.1 mouse_genomes_project 1 132631186 132680435 - MGP_WSBEiJ_P0021251 Gm29427 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005746.1 MGP_WSBEiJ_G0004818.1 mouse_genomes_project 1 91322438 91327073 + Gm9991 lincRNA lincRNA MGP_WSBEiJ_T0021530.1 MGP_WSBEiJ_G0015914.1 mouse_genomes_project 1 136473764 136476326 + MGP_WSBEiJ_P0021530 Myog protein_coding protein_coding MGP_WSBEiJ_T0011796.1 MGP_WSBEiJ_G0009926.1 mouse_genomes_project 1 48232093 48232530 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005701.1 MGP_WSBEiJ_G0004781.1 mouse_genomes_project 1 73209103 73236994 + D530049I02Rik lincRNA lincRNA MGP_WSBEiJ_T0011786.1 MGP_WSBEiJ_G0009916.1 mouse_genomes_project 1 46535462 46536289 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018761.1 MGP_WSBEiJ_G0015351.1 mouse_genomes_project 1 35546432 35560577 - MGP_WSBEiJ_P0018761 Coa5 protein_coding protein_coding MGP_WSBEiJ_T0018762.1 MGP_WSBEiJ_G0015351.1 mouse_genomes_project 1 35558985 35560474 - Coa5 protein_coding retained_intron MGP_WSBEiJ_T0011650.1 MGP_WSBEiJ_G0009780.1 mouse_genomes_project 1 1774516 1775147 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019520.1 MGP_WSBEiJ_G0015498.1 mouse_genomes_project 1 61970030 62011966 + Nrp2 protein_coding retained_intron MGP_WSBEiJ_T0019521.1 MGP_WSBEiJ_G0015498.1 mouse_genomes_project 1 61970030 62098949 + MGP_WSBEiJ_P0019521 Nrp2 protein_coding protein_coding MGP_WSBEiJ_T0019522.1 MGP_WSBEiJ_G0015498.1 mouse_genomes_project 1 61970030 62098949 + MGP_WSBEiJ_P0019522 Nrp2 protein_coding protein_coding MGP_WSBEiJ_T0019523.1 MGP_WSBEiJ_G0015498.1 mouse_genomes_project 1 61970447 62071036 + MGP_WSBEiJ_P0019523 Nrp2 protein_coding protein_coding MGP_WSBEiJ_T0019524.1 MGP_WSBEiJ_G0015498.1 mouse_genomes_project 1 61970447 62074445 + MGP_WSBEiJ_P0019524 Nrp2 protein_coding protein_coding MGP_WSBEiJ_T0019525.1 MGP_WSBEiJ_G0015498.1 mouse_genomes_project 1 61970447 62098949 + MGP_WSBEiJ_P0019525 Nrp2 protein_coding protein_coding MGP_WSBEiJ_T0019526.1 MGP_WSBEiJ_G0015498.1 mouse_genomes_project 1 61970447 62098949 + MGP_WSBEiJ_P0019526 Nrp2 protein_coding protein_coding MGP_WSBEiJ_T0012054.1 MGP_WSBEiJ_G0010184.1 mouse_genomes_project 1 158097821 158098033 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097533.1 MGP_WSBEiJ_G0036196.1 mouse_genomes_project 1 33796305 33796410 + Gm25634 snRNA snRNA MGP_WSBEiJ_T0011983.1 MGP_WSBEiJ_G0010113.1 mouse_genomes_project 1 123025669 123027531 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011783.1 MGP_WSBEiJ_G0009913.1 mouse_genomes_project 1 44503453 44503717 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005799.1 MGP_WSBEiJ_G0004862.1 mouse_genomes_project 1 122586891 122620395 + Celrr lincRNA lincRNA MGP_WSBEiJ_T0005800.1 MGP_WSBEiJ_G0004862.1 mouse_genomes_project 1 122586957 122617189 + Celrr lincRNA lincRNA MGP_WSBEiJ_T0005801.1 MGP_WSBEiJ_G0004862.1 mouse_genomes_project 1 122586960 122681749 + Celrr lincRNA lincRNA MGP_WSBEiJ_T0005802.1 MGP_WSBEiJ_G0004862.1 mouse_genomes_project 1 122587015 122588419 + Celrr lincRNA lincRNA MGP_WSBEiJ_T0000457.1 MGP_WSBEiJ_G0000402.1 mouse_genomes_project 1 59790292 59791722 - TEC TEC MGP_WSBEiJ_T0023511.1 MGP_WSBEiJ_G0016343.1 mouse_genomes_project 1 195672860 195688979 - MGP_WSBEiJ_P0023511 Tatdn3 protein_coding protein_coding MGP_WSBEiJ_T0023512.1 MGP_WSBEiJ_G0016343.1 mouse_genomes_project 1 195672863 195677578 - Tatdn3 protein_coding retained_intron MGP_WSBEiJ_T0023513.1 MGP_WSBEiJ_G0016343.1 mouse_genomes_project 1 195673126 195688931 - MGP_WSBEiJ_P0023513 Tatdn3 protein_coding protein_coding MGP_WSBEiJ_T0023514.1 MGP_WSBEiJ_G0016343.1 mouse_genomes_project 1 195680995 195684917 - Tatdn3 protein_coding retained_intron MGP_WSBEiJ_T0023515.1 MGP_WSBEiJ_G0016343.1 mouse_genomes_project 1 195683969 195685512 - Tatdn3 protein_coding retained_intron MGP_WSBEiJ_T0023516.1 MGP_WSBEiJ_G0016343.1 mouse_genomes_project 1 195684851 195688978 - Tatdn3 protein_coding retained_intron MGP_WSBEiJ_T0023517.1 MGP_WSBEiJ_G0016343.1 mouse_genomes_project 1 195686133 195688978 - Tatdn3 protein_coding retained_intron MGP_WSBEiJ_T0022468.1 MGP_WSBEiJ_G0016096.1 mouse_genomes_project 1 168614699 168637472 - MGP_WSBEiJ_P0022468 Tbx19 protein_coding protein_coding MGP_WSBEiJ_T0022469.1 MGP_WSBEiJ_G0016096.1 mouse_genomes_project 1 168615707 168626380 - Tbx19 protein_coding processed_transcript MGP_WSBEiJ_T0022470.1 MGP_WSBEiJ_G0016096.1 mouse_genomes_project 1 168615765 168630461 - MGP_WSBEiJ_P0022470 Tbx19 protein_coding protein_coding MGP_WSBEiJ_T0022471.1 MGP_WSBEiJ_G0016096.1 mouse_genomes_project 1 168619227 168626065 - Tbx19 protein_coding processed_transcript MGP_WSBEiJ_T0000762.1 MGP_WSBEiJ_G0000703.1 mouse_genomes_project 1 194471311 194474940 - TEC TEC MGP_WSBEiJ_T0023417.1 MGP_WSBEiJ_G0016328.1 mouse_genomes_project 1 191469703 191645649 - MGP_WSBEiJ_P0023417 Spata17 protein_coding protein_coding MGP_WSBEiJ_T0023418.1 MGP_WSBEiJ_G0016328.1 mouse_genomes_project 1 191473462 191645630 - MGP_WSBEiJ_P0023418 Spata17 protein_coding protein_coding MGP_WSBEiJ_T0023419.1 MGP_WSBEiJ_G0016328.1 mouse_genomes_project 1 191532041 191568681 - MGP_WSBEiJ_P0023419 Spata17 protein_coding protein_coding MGP_WSBEiJ_T0023420.1 MGP_WSBEiJ_G0016328.1 mouse_genomes_project 1 191536831 191645621 - MGP_WSBEiJ_P0023420 Spata17 protein_coding protein_coding MGP_WSBEiJ_T0023421.1 MGP_WSBEiJ_G0016328.1 mouse_genomes_project 1 191559881 191568874 - MGP_WSBEiJ_P0023421 Spata17 protein_coding protein_coding MGP_WSBEiJ_T0023422.1 MGP_WSBEiJ_G0016328.1 mouse_genomes_project 1 191559881 191645605 - MGP_WSBEiJ_P0023422 Spata17 protein_coding protein_coding MGP_WSBEiJ_T0023423.1 MGP_WSBEiJ_G0016328.1 mouse_genomes_project 1 191559888 191568861 - Spata17 protein_coding processed_transcript MGP_WSBEiJ_T0023424.1 MGP_WSBEiJ_G0016328.1 mouse_genomes_project 1 191616974 191645630 - Spata17 protein_coding processed_transcript MGP_WSBEiJ_T0020905.1 MGP_WSBEiJ_G0015774.1 mouse_genomes_project 1 99332637 99431837 + MGP_WSBEiJ_P0020905 protein_coding protein_coding MGP_WSBEiJ_T0020906.1 MGP_WSBEiJ_G0015774.1 mouse_genomes_project 1 99332640 99453744 + MGP_WSBEiJ_P0020906 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020907.1 MGP_WSBEiJ_G0015774.1 mouse_genomes_project 1 99332667 99431704 + MGP_WSBEiJ_P0020907 protein_coding protein_coding MGP_WSBEiJ_T0020908.1 MGP_WSBEiJ_G0015774.1 mouse_genomes_project 1 99418502 99431840 + protein_coding processed_transcript MGP_WSBEiJ_T0000648.1 MGP_WSBEiJ_G0000591.1 mouse_genomes_project 1 153959888 153961984 + TEC TEC MGP_WSBEiJ_T0097489.1 MGP_WSBEiJ_G0036156.1 mouse_genomes_project 1 193740573 193741256 - 2900042K21Rik sense_overlapping sense_overlapping MGP_WSBEiJ_T0000778.1 MGP_WSBEiJ_G0000718.1 mouse_genomes_project 1 199757549 199760263 + TEC TEC MGP_WSBEiJ_T0005752.1 MGP_WSBEiJ_G0004824.1 mouse_genomes_project 1 92692348 92696877 + Gm26720 lincRNA lincRNA MGP_WSBEiJ_T0021469.1 MGP_WSBEiJ_G0015899.1 mouse_genomes_project 1 135497052 135539080 - MGP_WSBEiJ_P0021469 Sox13 protein_coding protein_coding MGP_WSBEiJ_T0021470.1 MGP_WSBEiJ_G0015899.1 mouse_genomes_project 1 135498400 135539108 - MGP_WSBEiJ_P0021470 Sox13 protein_coding protein_coding MGP_WSBEiJ_T0021471.1 MGP_WSBEiJ_G0015899.1 mouse_genomes_project 1 135498400 135507965 - MGP_WSBEiJ_P0021471 Sox13 protein_coding protein_coding MGP_WSBEiJ_T0021472.1 MGP_WSBEiJ_G0015899.1 mouse_genomes_project 1 135498727 135500257 - Sox13 protein_coding retained_intron MGP_WSBEiJ_T0021473.1 MGP_WSBEiJ_G0015899.1 mouse_genomes_project 1 135499282 135501165 - Sox13 protein_coding retained_intron MGP_WSBEiJ_T0012027.1 MGP_WSBEiJ_G0010157.1 mouse_genomes_project 1 145680019 145681289 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018815.1 MGP_WSBEiJ_G0015362.1 mouse_genomes_project 1 36170335 36230122 + MGP_WSBEiJ_P0018815 Eif5b protein_coding protein_coding MGP_WSBEiJ_T0018816.1 MGP_WSBEiJ_G0015362.1 mouse_genomes_project 1 36170454 36226564 + Eif5b protein_coding retained_intron MGP_WSBEiJ_T0018817.1 MGP_WSBEiJ_G0015362.1 mouse_genomes_project 1 36216330 36219988 + Eif5b protein_coding retained_intron MGP_WSBEiJ_T0018818.1 MGP_WSBEiJ_G0015362.1 mouse_genomes_project 1 36217381 36221224 + Eif5b protein_coding processed_transcript MGP_WSBEiJ_T0018819.1 MGP_WSBEiJ_G0015362.1 mouse_genomes_project 1 36219181 36223351 + Eif5b protein_coding retained_intron MGP_WSBEiJ_T0020646.1 MGP_WSBEiJ_G0015716.1 mouse_genomes_project 1 92042093 92049882 + MGP_WSBEiJ_P0020646 Fam132b protein_coding protein_coding MGP_WSBEiJ_T0020647.1 MGP_WSBEiJ_G0015716.1 mouse_genomes_project 1 92046357 92049757 + MGP_WSBEiJ_P0020647 Fam132b protein_coding protein_coding MGP_WSBEiJ_T0019100.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50938561 51010605 - MGP_WSBEiJ_P0019100 Gls protein_coding protein_coding MGP_WSBEiJ_T0019101.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50941054 51009678 - MGP_WSBEiJ_P0019101 Gls protein_coding protein_coding MGP_WSBEiJ_T0019102.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50941241 50967431 - MGP_WSBEiJ_P0019102 Gls protein_coding protein_coding MGP_WSBEiJ_T0019103.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50941377 50944091 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019104.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50941395 50944261 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019105.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50943562 50967432 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019106.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50959206 51010614 - MGP_WSBEiJ_P0019106 Gls protein_coding protein_coding MGP_WSBEiJ_T0019107.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50961779 50976583 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019108.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50961779 50988265 - MGP_WSBEiJ_P0019108 Gls protein_coding protein_coding MGP_WSBEiJ_T0019109.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50964225 50967431 - MGP_WSBEiJ_P0019109 Gls protein_coding protein_coding MGP_WSBEiJ_T0019110.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50966004 50973550 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019111.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50967721 50992945 - Gls protein_coding processed_transcript MGP_WSBEiJ_T0019112.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50972666 50976475 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019113.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50980345 50992945 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019114.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50981355 50991884 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019115.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50983474 50993294 - Gls protein_coding retained_intron MGP_WSBEiJ_T0019116.1 MGP_WSBEiJ_G0015422.1 mouse_genomes_project 1 50991868 51010187 - Gls protein_coding processed_transcript MGP_WSBEiJ_T0011934.1 MGP_WSBEiJ_G0010064.1 mouse_genomes_project 1 105605870 105606938 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022823.1 MGP_WSBEiJ_G0016175.1 mouse_genomes_project 1 175426550 175448890 + MGP_WSBEiJ_P0022823 Cd48 protein_coding protein_coding MGP_WSBEiJ_T0022824.1 MGP_WSBEiJ_G0016175.1 mouse_genomes_project 1 175426551 175448888 + MGP_WSBEiJ_P0022824 Cd48 protein_coding protein_coding MGP_WSBEiJ_T0011912.1 MGP_WSBEiJ_G0010042.1 mouse_genomes_project 1 93743175 93746561 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019312.1 MGP_WSBEiJ_G0015463.1 mouse_genomes_project 1 57274774 57387136 + MGP_WSBEiJ_P0019312 Aox2 protein_coding protein_coding MGP_WSBEiJ_T0021268.1 MGP_WSBEiJ_G0015853.1 mouse_genomes_project 1 132802213 132827748 + MGP_WSBEiJ_P0021268 Pigr protein_coding protein_coding MGP_WSBEiJ_T0021269.1 MGP_WSBEiJ_G0015853.1 mouse_genomes_project 1 132802417 132820202 + MGP_WSBEiJ_P0021269 Pigr protein_coding protein_coding MGP_WSBEiJ_T0021270.1 MGP_WSBEiJ_G0015853.1 mouse_genomes_project 1 132804540 132820170 + MGP_WSBEiJ_P0021270 Pigr protein_coding protein_coding MGP_WSBEiJ_T0020445.1 MGP_WSBEiJ_G0015676.1 mouse_genomes_project 1 87534209 87556553 + MGP_WSBEiJ_P0020445 Eif4e2 protein_coding protein_coding MGP_WSBEiJ_T0020446.1 MGP_WSBEiJ_G0015676.1 mouse_genomes_project 1 87534209 87546894 + MGP_WSBEiJ_P0020446 Eif4e2 protein_coding protein_coding MGP_WSBEiJ_T0020447.1 MGP_WSBEiJ_G0015676.1 mouse_genomes_project 1 87534209 87562348 + MGP_WSBEiJ_P0020447 Eif4e2 protein_coding protein_coding MGP_WSBEiJ_T0020448.1 MGP_WSBEiJ_G0015676.1 mouse_genomes_project 1 87534209 87549143 + MGP_WSBEiJ_P0020448 Eif4e2 protein_coding protein_coding MGP_WSBEiJ_T0020449.1 MGP_WSBEiJ_G0015676.1 mouse_genomes_project 1 87534209 87562348 + MGP_WSBEiJ_P0020449 Eif4e2 protein_coding protein_coding MGP_WSBEiJ_T0020450.1 MGP_WSBEiJ_G0015676.1 mouse_genomes_project 1 87534234 87546887 + MGP_WSBEiJ_P0020450 Eif4e2 protein_coding protein_coding MGP_WSBEiJ_T0020451.1 MGP_WSBEiJ_G0015676.1 mouse_genomes_project 1 87534274 87546160 + MGP_WSBEiJ_P0020451 Eif4e2 protein_coding protein_coding MGP_WSBEiJ_T0020452.1 MGP_WSBEiJ_G0015676.1 mouse_genomes_project 1 87534581 87548352 + MGP_WSBEiJ_P0020452 Eif4e2 protein_coding protein_coding MGP_WSBEiJ_T0011700.1 MGP_WSBEiJ_G0009830.1 mouse_genomes_project 1 16381908 16382020 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097584.1 MGP_WSBEiJ_G0036247.1 mouse_genomes_project 1 153939511 153939609 - Gm22756 snRNA snRNA MGP_WSBEiJ_T0016421.1 MGP_WSBEiJ_G0014525.1 mouse_genomes_project 1 90487907 90489536 + D130058E05Rik processed_transcript antisense MGP_WSBEiJ_T0016422.1 MGP_WSBEiJ_G0014525.1 mouse_genomes_project 1 90487934 90490963 + D130058E05Rik processed_transcript retained_intron MGP_WSBEiJ_T0012105.1 MGP_WSBEiJ_G0010235.1 mouse_genomes_project 1 180828247 180828576 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005874.1 MGP_WSBEiJ_G0004920.1 mouse_genomes_project 1 164187766 164188230 + Gm38060 lincRNA lincRNA MGP_WSBEiJ_T0018283.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8551434 8744757 + MGP_WSBEiJ_P0018283 A830018L16Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0018284.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8552124 8744745 + MGP_WSBEiJ_P0018284 A830018L16Rik protein_coding protein_coding MGP_WSBEiJ_T0018285.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8552124 9106500 + MGP_WSBEiJ_P0018285 A830018L16Rik protein_coding protein_coding MGP_WSBEiJ_T0018286.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8552131 8658068 + A830018L16Rik protein_coding processed_transcript MGP_WSBEiJ_T0018287.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8552131 8680146 + A830018L16Rik protein_coding processed_transcript MGP_WSBEiJ_T0018288.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8552131 9062925 + MGP_WSBEiJ_P0018288 A830018L16Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018289.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8552521 9105995 + MGP_WSBEiJ_P0018289 A830018L16Rik protein_coding protein_coding MGP_WSBEiJ_T0018290.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8552521 9105995 + MGP_WSBEiJ_P0018290 A830018L16Rik protein_coding protein_coding MGP_WSBEiJ_T0018291.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8651254 8742927 + MGP_WSBEiJ_P0018291 A830018L16Rik protein_coding protein_coding MGP_WSBEiJ_T0018292.1 MGP_WSBEiJ_G0015253.1 mouse_genomes_project 1 8722228 8739566 + A830018L16Rik protein_coding processed_transcript MGP_WSBEiJ_T0002722.1 MGP_WSBEiJ_G0002593.1 mouse_genomes_project 1 37088892 37092092 + Gm37707 antisense antisense MGP_WSBEiJ_T0023187.1 MGP_WSBEiJ_G0016274.1 mouse_genomes_project 1 184505361 184604349 + MGP_WSBEiJ_P0023187 Itpkb protein_coding protein_coding MGP_WSBEiJ_T0023188.1 MGP_WSBEiJ_G0016274.1 mouse_genomes_project 1 184508744 184513337 + Itpkb protein_coding retained_intron MGP_WSBEiJ_T0000468.1 MGP_WSBEiJ_G0000413.1 mouse_genomes_project 1 62545536 62546015 - TEC TEC MGP_WSBEiJ_T0018137.1 MGP_WSBEiJ_G0015232.1 mouse_genomes_project 1 2620865 2623700 + Oprk1 protein_coding retained_intron MGP_WSBEiJ_T0018138.1 MGP_WSBEiJ_G0015232.1 mouse_genomes_project 1 2620892 2638554 + MGP_WSBEiJ_P0018138 Oprk1 protein_coding protein_coding MGP_WSBEiJ_T0018139.1 MGP_WSBEiJ_G0015232.1 mouse_genomes_project 1 2620956 2635283 + MGP_WSBEiJ_P0018139 Oprk1 protein_coding protein_coding MGP_WSBEiJ_T0018140.1 MGP_WSBEiJ_G0015232.1 mouse_genomes_project 1 2621340 2636431 + MGP_WSBEiJ_P0018140 Oprk1 protein_coding protein_coding MGP_WSBEiJ_T0018141.1 MGP_WSBEiJ_G0015232.1 mouse_genomes_project 1 2628914 2635570 + Oprk1 protein_coding retained_intron MGP_WSBEiJ_T0021285.1 MGP_WSBEiJ_G0015858.1 mouse_genomes_project 1 133016710 133023996 + MGP_WSBEiJ_P0021285 Il10 protein_coding protein_coding MGP_WSBEiJ_T0002748.1 MGP_WSBEiJ_G0002614.1 mouse_genomes_project 1 58659596 58662021 - 1700122D07Rik antisense antisense MGP_WSBEiJ_T0098763.1 MGP_WSBEiJ_G0037426.1 mouse_genomes_project 1 62466980 62467112 + Snora41 snoRNA snoRNA MGP_WSBEiJ_T0098794.1 MGP_WSBEiJ_G0037457.1 mouse_genomes_project 1 139744457 139744554 - Gm23534 snoRNA snoRNA MGP_WSBEiJ_T0097549.1 MGP_WSBEiJ_G0036212.1 mouse_genomes_project 1 71978720 71978911 + Gm25360 snRNA snRNA MGP_WSBEiJ_T0023490.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195549874 195571601 + MGP_WSBEiJ_P0023490 Angel2 protein_coding protein_coding MGP_WSBEiJ_T0023491.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195553251 195563097 + Angel2 protein_coding retained_intron MGP_WSBEiJ_T0023492.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195553251 195571601 + MGP_WSBEiJ_P0023492 Angel2 protein_coding protein_coding MGP_WSBEiJ_T0023493.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195553251 195571601 + MGP_WSBEiJ_P0023493 Angel2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023494.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195553251 195571601 + MGP_WSBEiJ_P0023494 Angel2 protein_coding protein_coding MGP_WSBEiJ_T0023495.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195553596 195562670 + Angel2 protein_coding retained_intron MGP_WSBEiJ_T0023496.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195553692 195569739 + MGP_WSBEiJ_P0023496 Angel2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023497.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195557542 195562142 + MGP_WSBEiJ_P0023497 Angel2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023498.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195561916 195563929 + Angel2 protein_coding retained_intron MGP_WSBEiJ_T0023499.1 MGP_WSBEiJ_G0016339.1 mouse_genomes_project 1 195562108 195571601 + Angel2 protein_coding processed_transcript MGP_WSBEiJ_T0000688.1 MGP_WSBEiJ_G0000631.1 mouse_genomes_project 1 164267213 164270783 + TEC TEC MGP_WSBEiJ_T0002826.1 MGP_WSBEiJ_G0002669.1 mouse_genomes_project 1 136065843 136073983 + Gm15851 antisense antisense MGP_WSBEiJ_T0005577.1 MGP_WSBEiJ_G0004690.1 mouse_genomes_project 1 18185602 18188622 + Gm28065 lincRNA lincRNA MGP_WSBEiJ_T0021993.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156452224 156485101 - MGP_WSBEiJ_P0021993 Dhx9 protein_coding protein_coding MGP_WSBEiJ_T0021994.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156452224 156485153 - MGP_WSBEiJ_P0021994 Dhx9 protein_coding protein_coding MGP_WSBEiJ_T0021995.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156459086 156485138 - MGP_WSBEiJ_P0021995 Dhx9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021996.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156459092 156475641 - MGP_WSBEiJ_P0021996 Dhx9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021997.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156460710 156485144 - MGP_WSBEiJ_P0021997 Dhx9 protein_coding protein_coding MGP_WSBEiJ_T0021998.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156468573 156475655 - Dhx9 protein_coding retained_intron MGP_WSBEiJ_T0021999.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156474340 156485151 - Dhx9 protein_coding retained_intron MGP_WSBEiJ_T0022000.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156475779 156478028 - Dhx9 protein_coding retained_intron MGP_WSBEiJ_T0022001.1 MGP_WSBEiJ_G0016006.1 mouse_genomes_project 1 156479864 156485127 - Dhx9 protein_coding retained_intron MGP_WSBEiJ_T0018317.1 MGP_WSBEiJ_G0015258.1 mouse_genomes_project 1 10738014 10769262 - MGP_WSBEiJ_P0018317 Tram1 protein_coding protein_coding MGP_WSBEiJ_T0018318.1 MGP_WSBEiJ_G0015258.1 mouse_genomes_project 1 10754607 10758258 - Tram1 protein_coding retained_intron MGP_WSBEiJ_T0018319.1 MGP_WSBEiJ_G0015258.1 mouse_genomes_project 1 10756581 10769232 - MGP_WSBEiJ_P0018319 Tram1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011839.1 MGP_WSBEiJ_G0009969.1 mouse_genomes_project 1 60096789 60098872 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020428.1 MGP_WSBEiJ_G0015670.1 mouse_genomes_project 1 87412720 87416325 - MGP_WSBEiJ_P0020428 Alpi protein_coding protein_coding MGP_WSBEiJ_T0005890.1 MGP_WSBEiJ_G0004933.1 mouse_genomes_project 1 169216433 169219086 + lincRNA lincRNA MGP_WSBEiJ_T0012131.1 MGP_WSBEiJ_G0010261.1 mouse_genomes_project 1 196058278 196058860 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011653.1 MGP_WSBEiJ_G0009783.1 mouse_genomes_project 1 2326464 2327430 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021388.1 MGP_WSBEiJ_G0015882.1 mouse_genomes_project 1 134400044 134435708 - MGP_WSBEiJ_P0021388 Tmcc2 protein_coding protein_coding MGP_WSBEiJ_T0021389.1 MGP_WSBEiJ_G0015882.1 mouse_genomes_project 1 134400045 134412527 - Tmcc2 protein_coding retained_intron MGP_WSBEiJ_T0021390.1 MGP_WSBEiJ_G0015882.1 mouse_genomes_project 1 134400045 134412528 - MGP_WSBEiJ_P0021390 Tmcc2 protein_coding protein_coding MGP_WSBEiJ_T0021391.1 MGP_WSBEiJ_G0015882.1 mouse_genomes_project 1 134404210 134411713 - Tmcc2 protein_coding processed_transcript MGP_WSBEiJ_T0021392.1 MGP_WSBEiJ_G0015882.1 mouse_genomes_project 1 134404637 134408566 - Tmcc2 protein_coding processed_transcript MGP_WSBEiJ_T0000649.1 MGP_WSBEiJ_G0000592.1 mouse_genomes_project 1 154347511 154350017 + TEC TEC MGP_WSBEiJ_T0000521.1 MGP_WSBEiJ_G0000466.1 mouse_genomes_project 1 87109096 87112877 + TEC TEC MGP_WSBEiJ_T0020959.1 MGP_WSBEiJ_G0015786.1 mouse_genomes_project 1 108009640 108033068 + MGP_WSBEiJ_P0020959 Serpinb5 protein_coding protein_coding MGP_WSBEiJ_T0020960.1 MGP_WSBEiJ_G0015786.1 mouse_genomes_project 1 108009641 108030063 + MGP_WSBEiJ_P0020960 Serpinb5 protein_coding protein_coding MGP_WSBEiJ_T0020961.1 MGP_WSBEiJ_G0015786.1 mouse_genomes_project 1 108009670 108033068 + MGP_WSBEiJ_P0020961 Serpinb5 protein_coding protein_coding MGP_WSBEiJ_T0020962.1 MGP_WSBEiJ_G0015786.1 mouse_genomes_project 1 108019968 108033067 + MGP_WSBEiJ_P0020962 Serpinb5 protein_coding protein_coding MGP_WSBEiJ_T0021080.1 MGP_WSBEiJ_G0015811.1 mouse_genomes_project 1 121365752 121371072 - MGP_WSBEiJ_P0021080 Tmem177 protein_coding protein_coding MGP_WSBEiJ_T0011723.1 MGP_WSBEiJ_G0009853.1 mouse_genomes_project 1 25508069 25508723 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019783.1 MGP_WSBEiJ_G0015551.1 mouse_genomes_project 1 72624061 72653675 + MGP_WSBEiJ_P0019783 Igfbp2 protein_coding protein_coding MGP_WSBEiJ_T0019784.1 MGP_WSBEiJ_G0015551.1 mouse_genomes_project 1 72649901 72653330 + Igfbp2 protein_coding retained_intron MGP_WSBEiJ_T0023072.1 MGP_WSBEiJ_G0016252.1 mouse_genomes_project 1 181012760 181245586 - MGP_WSBEiJ_P0023072 Akt3 protein_coding protein_coding MGP_WSBEiJ_T0023073.1 MGP_WSBEiJ_G0016252.1 mouse_genomes_project 1 181014802 181245557 - MGP_WSBEiJ_P0023073 Akt3 protein_coding protein_coding MGP_WSBEiJ_T0023074.1 MGP_WSBEiJ_G0016252.1 mouse_genomes_project 1 181014803 181254681 - MGP_WSBEiJ_P0023074 Akt3 protein_coding protein_coding MGP_WSBEiJ_T0018996.1 MGP_WSBEiJ_G0015401.1 mouse_genomes_project 1 42653519 42665761 - MGP_WSBEiJ_P0018996 Kdelc1 protein_coding protein_coding MGP_WSBEiJ_T0018997.1 MGP_WSBEiJ_G0015401.1 mouse_genomes_project 1 42653858 42665706 - Kdelc1 protein_coding retained_intron MGP_WSBEiJ_T0018998.1 MGP_WSBEiJ_G0015401.1 mouse_genomes_project 1 42653860 42665718 - MGP_WSBEiJ_P0018998 Kdelc1 protein_coding protein_coding MGP_WSBEiJ_T0018999.1 MGP_WSBEiJ_G0015401.1 mouse_genomes_project 1 42659044 42665718 - Kdelc1 protein_coding retained_intron MGP_WSBEiJ_T0019000.1 MGP_WSBEiJ_G0015401.1 mouse_genomes_project 1 42661744 42665654 - MGP_WSBEiJ_P0019000 Kdelc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018856.1 MGP_WSBEiJ_G0015370.1 mouse_genomes_project 1 37599414 37602891 + MGP_WSBEiJ_P0018856 Rpl31 protein_coding protein_coding MGP_WSBEiJ_T0018857.1 MGP_WSBEiJ_G0015370.1 mouse_genomes_project 1 37599685 37603011 + MGP_WSBEiJ_P0018857 Rpl31 protein_coding protein_coding MGP_WSBEiJ_T0018858.1 MGP_WSBEiJ_G0015370.1 mouse_genomes_project 1 37601373 37602891 + Rpl31 protein_coding retained_intron MGP_WSBEiJ_T0023314.1 MGP_WSBEiJ_G0016304.1 mouse_genomes_project 1 187101879 187193918 + MGP_WSBEiJ_P0023314 Susd4 protein_coding protein_coding MGP_WSBEiJ_T0023315.1 MGP_WSBEiJ_G0016304.1 mouse_genomes_project 1 187102031 187235228 + MGP_WSBEiJ_P0023315 Susd4 protein_coding protein_coding MGP_WSBEiJ_T0023316.1 MGP_WSBEiJ_G0016304.1 mouse_genomes_project 1 187102414 187171990 + MGP_WSBEiJ_P0023316 Susd4 protein_coding protein_coding MGP_WSBEiJ_T0023317.1 MGP_WSBEiJ_G0016304.1 mouse_genomes_project 1 187102575 187172016 + MGP_WSBEiJ_P0023317 Susd4 protein_coding protein_coding MGP_WSBEiJ_T0023318.1 MGP_WSBEiJ_G0016304.1 mouse_genomes_project 1 187102914 187236587 + MGP_WSBEiJ_P0023318 Susd4 protein_coding protein_coding MGP_WSBEiJ_T0021849.1 MGP_WSBEiJ_G0015979.1 mouse_genomes_project 1 147357305 147381714 - MGP_WSBEiJ_P0021849 Rgs18 protein_coding protein_coding MGP_WSBEiJ_T0019586.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63865778 63931240 + MGP_WSBEiJ_P0019586 Creb1 protein_coding protein_coding MGP_WSBEiJ_T0019587.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63865935 63936406 + MGP_WSBEiJ_P0019587 Creb1 protein_coding protein_coding MGP_WSBEiJ_T0019588.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63865937 63893179 + Creb1 protein_coding retained_intron MGP_WSBEiJ_T0019589.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63865942 63912754 + MGP_WSBEiJ_P0019589 Creb1 protein_coding protein_coding MGP_WSBEiJ_T0019590.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63865952 63938094 + MGP_WSBEiJ_P0019590 Creb1 protein_coding protein_coding MGP_WSBEiJ_T0019591.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63865965 63909650 + Creb1 protein_coding processed_transcript MGP_WSBEiJ_T0019592.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63865992 63931012 + MGP_WSBEiJ_P0019592 Creb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019593.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63894767 63896409 + Creb1 protein_coding retained_intron MGP_WSBEiJ_T0019594.1 MGP_WSBEiJ_G0015510.1 mouse_genomes_project 1 63910925 63913688 + Creb1 protein_coding retained_intron MGP_WSBEiJ_T0000450.1 MGP_WSBEiJ_G0000395.1 mouse_genomes_project 1 57864057 57867906 + TEC TEC MGP_WSBEiJ_T0100434.1 MGP_WSBEiJ_G0038893.1 mouse_genomes_project 1 178017135 178017601 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098776.1 MGP_WSBEiJ_G0037439.1 mouse_genomes_project 1 101236306 101236438 - Gm23602 snoRNA snoRNA MGP_WSBEiJ_T0005838.1 MGP_WSBEiJ_G0004893.1 mouse_genomes_project 1 140377682 140381088 + A430106G13Rik lincRNA lincRNA MGP_WSBEiJ_T0002801.1 MGP_WSBEiJ_G0002653.1 mouse_genomes_project 1 107690785 107724481 + D630008O14Rik antisense antisense MGP_WSBEiJ_T0002802.1 MGP_WSBEiJ_G0002653.1 mouse_genomes_project 1 107690785 107707827 + D630008O14Rik antisense antisense MGP_WSBEiJ_T0005732.1 MGP_WSBEiJ_G0004805.1 mouse_genomes_project 1 88923052 88944440 - Gm29538 lincRNA lincRNA MGP_WSBEiJ_T0012135.1 MGP_WSBEiJ_G0010265.1 mouse_genomes_project 1 197501189 197501643 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000725.1 MGP_WSBEiJ_G0000668.1 mouse_genomes_project 1 181130211 181131504 - TEC TEC MGP_WSBEiJ_T0000752.1 MGP_WSBEiJ_G0000693.1 mouse_genomes_project 1 190553705 190554193 + TEC TEC MGP_WSBEiJ_T0018930.1 MGP_WSBEiJ_G0015388.1 mouse_genomes_project 1 41164288 41174777 + MGP_WSBEiJ_P0018930 Pou3f3 protein_coding protein_coding MGP_WSBEiJ_T0000629.1 MGP_WSBEiJ_G0000572.1 mouse_genomes_project 1 141463354 141466147 + TEC TEC MGP_WSBEiJ_T0096885.1 MGP_WSBEiJ_G0035566.1 mouse_genomes_project 1 137397829 137397930 - Gm26280 rRNA rRNA MGP_WSBEiJ_T0011867.1 MGP_WSBEiJ_G0009997.1 mouse_genomes_project 1 68694089 68694475 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005870.1 MGP_WSBEiJ_G0004918.1 mouse_genomes_project 1 163346557 163349188 - Gm37294 lincRNA lincRNA MGP_WSBEiJ_T0000413.1 MGP_WSBEiJ_G0000358.1 mouse_genomes_project 1 32189900 32192125 + TEC TEC MGP_WSBEiJ_T0018436.1 MGP_WSBEiJ_G0015290.1 mouse_genomes_project 1 18350062 18435512 - MGP_WSBEiJ_P0018436 Tram2 protein_coding protein_coding MGP_WSBEiJ_T0018437.1 MGP_WSBEiJ_G0015290.1 mouse_genomes_project 1 18358080 18398536 - Tram2 protein_coding processed_transcript MGP_WSBEiJ_T0009342.1 MGP_WSBEiJ_G0007499.1 mouse_genomes_project 1 52708912 52708984 + Mir7681 miRNA miRNA MGP_WSBEiJ_T0021262.1 MGP_WSBEiJ_G0015850.1 mouse_genomes_project 1 132681963 132690035 + MGP_WSBEiJ_P0021262 Yod1 protein_coding protein_coding MGP_WSBEiJ_T0009386.1 MGP_WSBEiJ_G0007543.1 mouse_genomes_project 1 137029901 137029983 + Gm22232 miRNA miRNA MGP_WSBEiJ_T0005884.1 MGP_WSBEiJ_G0004930.1 mouse_genomes_project 1 168160345 168166450 - Gm36945 lincRNA lincRNA MGP_WSBEiJ_T0005885.1 MGP_WSBEiJ_G0004930.1 mouse_genomes_project 1 168160525 168166478 - Gm36945 lincRNA lincRNA MGP_WSBEiJ_T0012029.1 MGP_WSBEiJ_G0010159.1 mouse_genomes_project 1 146893719 146894124 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020668.1 MGP_WSBEiJ_G0015720.1 mouse_genomes_project 1 92172150 92207239 + MGP_WSBEiJ_P0020668 Traf3ip1 protein_coding protein_coding MGP_WSBEiJ_T0020669.1 MGP_WSBEiJ_G0015720.1 mouse_genomes_project 1 92172197 92208606 + MGP_WSBEiJ_P0020669 Traf3ip1 protein_coding protein_coding MGP_WSBEiJ_T0020670.1 MGP_WSBEiJ_G0015720.1 mouse_genomes_project 1 92197581 92208606 + Traf3ip1 protein_coding retained_intron MGP_WSBEiJ_T0020703.1 MGP_WSBEiJ_G0015728.1 mouse_genomes_project 1 93294315 93295136 + MGP_WSBEiJ_P0020703 Olfr1413 protein_coding protein_coding MGP_WSBEiJ_T0002898.1 MGP_WSBEiJ_G0002729.1 mouse_genomes_project 1 185012072 185015137 + H3f3aos antisense antisense MGP_WSBEiJ_T0002899.1 MGP_WSBEiJ_G0002729.1 mouse_genomes_project 1 185012080 185014966 + H3f3aos antisense antisense MGP_WSBEiJ_T0005699.1 MGP_WSBEiJ_G0004780.1 mouse_genomes_project 1 73200924 73217724 - Pinc lincRNA lincRNA MGP_WSBEiJ_T0005700.1 MGP_WSBEiJ_G0004780.1 mouse_genomes_project 1 73205471 73217724 - Pinc lincRNA lincRNA MGP_WSBEiJ_T0000440.1 MGP_WSBEiJ_G0000385.1 mouse_genomes_project 1 50287924 50290280 - TEC TEC MGP_WSBEiJ_T0099972.1 MGP_WSBEiJ_G0038632.1 mouse_genomes_project 1 117028138 117053213 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099973.1 MGP_WSBEiJ_G0038632.1 mouse_genomes_project 1 117028556 117029743 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099974.1 MGP_WSBEiJ_G0038632.1 mouse_genomes_project 1 117028984 117053218 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0018901.1 MGP_WSBEiJ_G0015380.1 mouse_genomes_project 1 38615390 38620245 + protein_coding retained_intron MGP_WSBEiJ_T0018902.1 MGP_WSBEiJ_G0015380.1 mouse_genomes_project 1 38616391 38619975 + MGP_WSBEiJ_P0018902 protein_coding protein_coding MGP_WSBEiJ_T0018903.1 MGP_WSBEiJ_G0015380.1 mouse_genomes_project 1 38616920 38655071 + MGP_WSBEiJ_P0018903 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000622.1 MGP_WSBEiJ_G0000565.1 mouse_genomes_project 1 140359435 140364715 + TEC TEC MGP_WSBEiJ_T0009345.1 MGP_WSBEiJ_G0007502.1 mouse_genomes_project 1 62302714 62302819 + Gm44468 miRNA miRNA MGP_WSBEiJ_T0002811.1 MGP_WSBEiJ_G0002660.1 mouse_genomes_project 1 132707099 132708265 - Gm28857 antisense antisense MGP_WSBEiJ_T0005745.1 MGP_WSBEiJ_G0004817.1 mouse_genomes_project 1 91028780 91029891 - Gm28722 lincRNA lincRNA MGP_WSBEiJ_T0100384.1 MGP_WSBEiJ_G0038843.1 mouse_genomes_project 1 18528967 18538409 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0019933.1 MGP_WSBEiJ_G0015577.1 mouse_genomes_project 1 74649318 74662709 + MGP_WSBEiJ_P0019933 Wnt6 protein_coding protein_coding MGP_WSBEiJ_T0019934.1 MGP_WSBEiJ_G0015577.1 mouse_genomes_project 1 74659811 74661975 + Wnt6 protein_coding retained_intron MGP_WSBEiJ_T0021578.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 136971827 137188139 - MGP_WSBEiJ_P0021578 Ppp1r12b protein_coding protein_coding MGP_WSBEiJ_T0021579.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 136972732 136977551 - Ppp1r12b protein_coding processed_transcript MGP_WSBEiJ_T0021580.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 136976262 137067666 - Ppp1r12b protein_coding processed_transcript MGP_WSBEiJ_T0021581.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 136977166 137188050 - MGP_WSBEiJ_P0021581 Ppp1r12b protein_coding protein_coding MGP_WSBEiJ_T0021582.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 136983106 137188139 - MGP_WSBEiJ_P0021582 Ppp1r12b protein_coding protein_coding MGP_WSBEiJ_T0021583.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 136998209 137024480 - Ppp1r12b protein_coding retained_intron MGP_WSBEiJ_T0021584.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 137001046 137003427 - Ppp1r12b protein_coding retained_intron MGP_WSBEiJ_T0021585.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 137055301 137057060 - Ppp1r12b protein_coding processed_transcript MGP_WSBEiJ_T0021586.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 137055304 137188127 - Ppp1r12b protein_coding retained_intron MGP_WSBEiJ_T0021587.1 MGP_WSBEiJ_G0015925.1 mouse_genomes_project 1 137176625 137188141 - MGP_WSBEiJ_P0021587 Ppp1r12b protein_coding protein_coding MGP_WSBEiJ_T0005916.1 MGP_WSBEiJ_G0004957.1 mouse_genomes_project 1 185291344 185293747 + Gm37406 lincRNA lincRNA MGP_WSBEiJ_T0000327.1 MGP_WSBEiJ_G0000275.1 mouse_genomes_project 1 711575 713968 + TEC TEC MGP_WSBEiJ_T0000761.1 MGP_WSBEiJ_G0000702.1 mouse_genomes_project 1 194179369 194180254 - TEC TEC MGP_WSBEiJ_T0005587.1 MGP_WSBEiJ_G0004699.1 mouse_genomes_project 1 28475910 28477313 - Gm9898 lincRNA lincRNA MGP_WSBEiJ_T0000395.1 MGP_WSBEiJ_G0000341.1 mouse_genomes_project 1 23360621 23360951 - TEC TEC MGP_WSBEiJ_T0000535.1 MGP_WSBEiJ_G0000480.1 mouse_genomes_project 1 91533759 91534593 - TEC TEC MGP_WSBEiJ_T0097237.1 MGP_WSBEiJ_G0035918.1 mouse_genomes_project 1 51483727 51488691 - sense_intronic sense_intronic MGP_WSBEiJ_T0009384.1 MGP_WSBEiJ_G0007541.1 mouse_genomes_project 1 134993412 134993533 - Gm44300 miRNA miRNA MGP_WSBEiJ_T0097542.1 MGP_WSBEiJ_G0036205.1 mouse_genomes_project 1 62905020 62905123 - Gm22281 snRNA snRNA MGP_WSBEiJ_T0002911.1 MGP_WSBEiJ_G0002740.1 mouse_genomes_project 1 192053766 192092048 - Gm36388 antisense antisense MGP_WSBEiJ_T0022472.1 MGP_WSBEiJ_G0016097.1 mouse_genomes_project 1 168651507 168671935 - MGP_WSBEiJ_P0022472 Sft2d2 protein_coding protein_coding MGP_WSBEiJ_T0022473.1 MGP_WSBEiJ_G0016097.1 mouse_genomes_project 1 168653039 168671818 - MGP_WSBEiJ_P0022473 Sft2d2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022474.1 MGP_WSBEiJ_G0016097.1 mouse_genomes_project 1 168656377 168671814 - MGP_WSBEiJ_P0022474 Sft2d2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020981.1 MGP_WSBEiJ_G0015795.1 mouse_genomes_project 1 108768620 108782267 + MGP_WSBEiJ_P0020981 protein_coding protein_coding MGP_WSBEiJ_T0005655.1 MGP_WSBEiJ_G0004746.1 mouse_genomes_project 1 56154909 56170400 - BC055402 lincRNA lincRNA MGP_WSBEiJ_T0009390.1 MGP_WSBEiJ_G0007547.1 mouse_genomes_project 1 147602343 147602445 - Gm25708 miRNA miRNA MGP_WSBEiJ_T0021479.1 MGP_WSBEiJ_G0015901.1 mouse_genomes_project 1 135750763 135797094 - MGP_WSBEiJ_P0021479 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021481.1 MGP_WSBEiJ_G0015901.1 mouse_genomes_project 1 135752601 135797094 - MGP_WSBEiJ_P0021481 protein_coding protein_coding MGP_WSBEiJ_T0011717.1 MGP_WSBEiJ_G0009847.1 mouse_genomes_project 1 22515158 22515959 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021614.1 MGP_WSBEiJ_G0015933.1 mouse_genomes_project 1 137572089 137592431 - MGP_WSBEiJ_P0021614 Timm17a protein_coding protein_coding MGP_WSBEiJ_T0021615.1 MGP_WSBEiJ_G0015933.1 mouse_genomes_project 1 137578584 137587685 - Timm17a protein_coding retained_intron MGP_WSBEiJ_T0021616.1 MGP_WSBEiJ_G0015933.1 mouse_genomes_project 1 137581256 137592344 - MGP_WSBEiJ_P0021616 Timm17a protein_coding protein_coding MGP_WSBEiJ_T0021617.1 MGP_WSBEiJ_G0015933.1 mouse_genomes_project 1 137586982 137590004 - MGP_WSBEiJ_P0021617 Timm17a protein_coding protein_coding MGP_WSBEiJ_T0018401.1 MGP_WSBEiJ_G0015279.1 mouse_genomes_project 1 15436166 15467997 - Crisp4 protein_coding retained_intron MGP_WSBEiJ_T0018402.1 MGP_WSBEiJ_G0015279.1 mouse_genomes_project 1 15436166 15468003 - MGP_WSBEiJ_P0018402 Crisp4 protein_coding protein_coding MGP_WSBEiJ_T0018403.1 MGP_WSBEiJ_G0015279.1 mouse_genomes_project 1 15436179 15460742 - MGP_WSBEiJ_P0018403 Crisp4 protein_coding protein_coding MGP_WSBEiJ_T0018404.1 MGP_WSBEiJ_G0015279.1 mouse_genomes_project 1 15436574 15468003 - MGP_WSBEiJ_P0018404 Crisp4 protein_coding protein_coding MGP_WSBEiJ_T0020206.1 MGP_WSBEiJ_G0015623.1 mouse_genomes_project 1 80174560 80194042 - MGP_WSBEiJ_P0020206 Fam124b protein_coding protein_coding MGP_WSBEiJ_T0020207.1 MGP_WSBEiJ_G0015623.1 mouse_genomes_project 1 80176176 80198574 - Fam124b protein_coding processed_transcript MGP_WSBEiJ_T0021326.1 MGP_WSBEiJ_G0015868.1 mouse_genomes_project 1 133688375 133717345 + MGP_WSBEiJ_P0021326 Rab7b protein_coding protein_coding MGP_WSBEiJ_T0005808.1 MGP_WSBEiJ_G0004868.1 mouse_genomes_project 1 127143705 127146535 + Gm28706 lincRNA lincRNA MGP_WSBEiJ_T0018864.1 MGP_WSBEiJ_G0015372.1 mouse_genomes_project 1 37777563 37797291 + MGP_WSBEiJ_P0018864 Cnot11 protein_coding protein_coding MGP_WSBEiJ_T0018865.1 MGP_WSBEiJ_G0015372.1 mouse_genomes_project 1 37778347 37797295 + MGP_WSBEiJ_P0018865 Cnot11 protein_coding protein_coding MGP_WSBEiJ_T0018866.1 MGP_WSBEiJ_G0015372.1 mouse_genomes_project 1 37781541 37796940 + Cnot11 protein_coding retained_intron MGP_WSBEiJ_T0018867.1 MGP_WSBEiJ_G0015372.1 mouse_genomes_project 1 37783327 37795857 + MGP_WSBEiJ_P0018867 Cnot11 protein_coding protein_coding MGP_WSBEiJ_T0022989.1 MGP_WSBEiJ_G0016231.1 mouse_genomes_project 1 178090631 178091677 + MGP_WSBEiJ_P0022989 Olfr420 protein_coding protein_coding MGP_WSBEiJ_T0020973.1 MGP_WSBEiJ_G0015792.1 mouse_genomes_project 1 108586090 108599050 + MGP_WSBEiJ_P0020973 Serpinb11 protein_coding protein_coding MGP_WSBEiJ_T0020974.1 MGP_WSBEiJ_G0015792.1 mouse_genomes_project 1 108586821 108605339 + MGP_WSBEiJ_P0020974 Serpinb11 protein_coding protein_coding MGP_WSBEiJ_T0002903.1 MGP_WSBEiJ_G0002732.1 mouse_genomes_project 1 189251004 189270401 + Gm38251 antisense antisense MGP_WSBEiJ_T0011720.1 MGP_WSBEiJ_G0009850.1 mouse_genomes_project 1 23532047 23532603 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000652.1 MGP_WSBEiJ_G0000595.1 mouse_genomes_project 1 155888358 155888796 + TEC TEC MGP_WSBEiJ_T0020238.1 MGP_WSBEiJ_G0015631.1 mouse_genomes_project 1 82691701 82751667 + Col4a3 protein_coding retained_intron MGP_WSBEiJ_T0020239.1 MGP_WSBEiJ_G0015631.1 mouse_genomes_project 1 82691756 82839113 + MGP_WSBEiJ_P0020239 Col4a3 protein_coding protein_coding MGP_WSBEiJ_T0020240.1 MGP_WSBEiJ_G0015631.1 mouse_genomes_project 1 82692125 82815141 + MGP_WSBEiJ_P0020240 Col4a3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020241.1 MGP_WSBEiJ_G0015631.1 mouse_genomes_project 1 82832666 82836319 + MGP_WSBEiJ_P0020241 Col4a3 protein_coding protein_coding MGP_WSBEiJ_T0020242.1 MGP_WSBEiJ_G0015631.1 mouse_genomes_project 1 82832666 82836238 + MGP_WSBEiJ_P0020242 Col4a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005943.1 MGP_WSBEiJ_G0004973.1 mouse_genomes_project 1 189026397 189032886 + 4930488B22Rik lincRNA lincRNA MGP_WSBEiJ_T0021516.1 MGP_WSBEiJ_G0015911.1 mouse_genomes_project 1 136360759 136369683 + MGP_WSBEiJ_P0021516 Chil1 protein_coding protein_coding MGP_WSBEiJ_T0021517.1 MGP_WSBEiJ_G0015911.1 mouse_genomes_project 1 136360987 136369676 + MGP_WSBEiJ_P0021517 Chil1 protein_coding protein_coding MGP_WSBEiJ_T0021518.1 MGP_WSBEiJ_G0015911.1 mouse_genomes_project 1 136360987 136369828 + MGP_WSBEiJ_P0021518 Chil1 protein_coding protein_coding MGP_WSBEiJ_T0021519.1 MGP_WSBEiJ_G0015911.1 mouse_genomes_project 1 136361057 136366205 + MGP_WSBEiJ_P0021519 Chil1 protein_coding protein_coding MGP_WSBEiJ_T0021520.1 MGP_WSBEiJ_G0015911.1 mouse_genomes_project 1 136361064 136366215 + MGP_WSBEiJ_P0021520 Chil1 protein_coding protein_coding MGP_WSBEiJ_T0021521.1 MGP_WSBEiJ_G0015911.1 mouse_genomes_project 1 136361065 136366492 + Chil1 protein_coding retained_intron MGP_WSBEiJ_T0021522.1 MGP_WSBEiJ_G0015911.1 mouse_genomes_project 1 136362386 136366274 + Chil1 protein_coding retained_intron MGP_WSBEiJ_T0021523.1 MGP_WSBEiJ_G0015911.1 mouse_genomes_project 1 136368772 136369674 + Chil1 protein_coding retained_intron MGP_WSBEiJ_T0000724.1 MGP_WSBEiJ_G0000667.1 mouse_genomes_project 1 181069964 181071265 - TEC TEC MGP_WSBEiJ_T0021531.1 MGP_WSBEiJ_G0015915.1 mouse_genomes_project 1 136481411 136520106 - MGP_WSBEiJ_P0021531 Ppfia4 protein_coding protein_coding MGP_WSBEiJ_T0021532.1 MGP_WSBEiJ_G0015915.1 mouse_genomes_project 1 136481412 136514457 - MGP_WSBEiJ_P0021532 Ppfia4 protein_coding protein_coding MGP_WSBEiJ_T0021533.1 MGP_WSBEiJ_G0015915.1 mouse_genomes_project 1 136481413 136489404 - Ppfia4 protein_coding processed_transcript MGP_WSBEiJ_T0021534.1 MGP_WSBEiJ_G0015915.1 mouse_genomes_project 1 136481417 136489366 - Ppfia4 protein_coding retained_intron MGP_WSBEiJ_T0021535.1 MGP_WSBEiJ_G0015915.1 mouse_genomes_project 1 136482129 136520106 - MGP_WSBEiJ_P0021535 Ppfia4 protein_coding protein_coding MGP_WSBEiJ_T0021536.1 MGP_WSBEiJ_G0015915.1 mouse_genomes_project 1 136483009 136498881 - Ppfia4 protein_coding retained_intron MGP_WSBEiJ_T0098807.1 MGP_WSBEiJ_G0037470.1 mouse_genomes_project 1 164396766 164396849 + Gm22357 snoRNA snoRNA MGP_WSBEiJ_T0019905.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74467368 74500983 + MGP_WSBEiJ_P0019905 Stk36 protein_coding protein_coding MGP_WSBEiJ_T0019906.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74467403 74500980 + Stk36 protein_coding retained_intron MGP_WSBEiJ_T0019907.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74467426 74498189 + MGP_WSBEiJ_P0019907 Stk36 protein_coding protein_coding MGP_WSBEiJ_T0019908.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74467437 74471450 + MGP_WSBEiJ_P0019908 Stk36 protein_coding protein_coding MGP_WSBEiJ_T0019909.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74467562 74500132 + MGP_WSBEiJ_P0019909 Stk36 protein_coding protein_coding MGP_WSBEiJ_T0019910.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74469129 74474329 + MGP_WSBEiJ_P0019910 Stk36 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019911.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74485071 74488633 + Stk36 protein_coding retained_intron MGP_WSBEiJ_T0019912.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74485548 74500175 + Stk36 protein_coding processed_transcript MGP_WSBEiJ_T0019913.1 MGP_WSBEiJ_G0015573.1 mouse_genomes_project 1 74489186 74500983 + Stk36 protein_coding retained_intron MGP_WSBEiJ_T0012023.1 MGP_WSBEiJ_G0010153.1 mouse_genomes_project 1 143740022 143740584 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023042.1 MGP_WSBEiJ_G0016247.1 mouse_genomes_project 1 179880722 179882619 + MGP_WSBEiJ_P0023042 Gm38100 protein_coding protein_coding MGP_WSBEiJ_T0023043.1 MGP_WSBEiJ_G0016247.1 mouse_genomes_project 1 179880763 179882092 + MGP_WSBEiJ_P0023043 Gm38100 protein_coding protein_coding MGP_WSBEiJ_T0019122.1 MGP_WSBEiJ_G0015424.1 mouse_genomes_project 1 51412717 51434628 + MGP_WSBEiJ_P0019122 Nemp2 protein_coding protein_coding MGP_WSBEiJ_T0019123.1 MGP_WSBEiJ_G0015424.1 mouse_genomes_project 1 51412751 51434628 + MGP_WSBEiJ_P0019123 Nemp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019124.1 MGP_WSBEiJ_G0015424.1 mouse_genomes_project 1 51412761 51433344 + MGP_WSBEiJ_P0019124 Nemp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019125.1 MGP_WSBEiJ_G0015424.1 mouse_genomes_project 1 51412766 51433437 + Nemp2 protein_coding retained_intron MGP_WSBEiJ_T0019126.1 MGP_WSBEiJ_G0015424.1 mouse_genomes_project 1 51412811 51433410 + MGP_WSBEiJ_P0019126 Nemp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019127.1 MGP_WSBEiJ_G0015424.1 mouse_genomes_project 1 51424221 51434628 + Nemp2 protein_coding retained_intron MGP_WSBEiJ_T0019128.1 MGP_WSBEiJ_G0015424.1 mouse_genomes_project 1 51424689 51433364 + Nemp2 protein_coding processed_transcript MGP_WSBEiJ_T0019129.1 MGP_WSBEiJ_G0015424.1 mouse_genomes_project 1 51427886 51432735 + Nemp2 protein_coding retained_intron MGP_WSBEiJ_T0023123.1 MGP_WSBEiJ_G0016267.1 mouse_genomes_project 1 183820332 183839858 + MGP_WSBEiJ_P0023123 Sccpdh protein_coding protein_coding MGP_WSBEiJ_T0023124.1 MGP_WSBEiJ_G0016267.1 mouse_genomes_project 1 183820332 183839858 + MGP_WSBEiJ_P0023124 Sccpdh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023125.1 MGP_WSBEiJ_G0016267.1 mouse_genomes_project 1 183820382 183830412 + Sccpdh protein_coding retained_intron MGP_WSBEiJ_T0023126.1 MGP_WSBEiJ_G0016267.1 mouse_genomes_project 1 183833426 183839494 + MGP_WSBEiJ_P0023126 Sccpdh protein_coding protein_coding MGP_WSBEiJ_T0023127.1 MGP_WSBEiJ_G0016267.1 mouse_genomes_project 1 183833455 183837159 + MGP_WSBEiJ_P0023127 Sccpdh protein_coding protein_coding MGP_WSBEiJ_T0023128.1 MGP_WSBEiJ_G0016267.1 mouse_genomes_project 1 183836512 183839502 + Sccpdh protein_coding retained_intron MGP_WSBEiJ_T0005719.1 MGP_WSBEiJ_G0004795.1 mouse_genomes_project 1 78797867 78799262 + Gm29187 lincRNA lincRNA MGP_WSBEiJ_T0011662.1 MGP_WSBEiJ_G0009792.1 mouse_genomes_project 1 4078456 4079762 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098732.1 MGP_WSBEiJ_G0037395.1 mouse_genomes_project 1 12931064 12931176 - Gm25227 snoRNA snoRNA MGP_WSBEiJ_T0011851.1 MGP_WSBEiJ_G0009981.1 mouse_genomes_project 1 63167135 63167887 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019787.1 MGP_WSBEiJ_G0015553.1 mouse_genomes_project 1 72819866 72820702 - MGP_WSBEiJ_P0019787 Tnp1 protein_coding protein_coding MGP_WSBEiJ_T0018983.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42632754 42649333 - MGP_WSBEiJ_P0018983 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018984.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42632757 42649380 - MGP_WSBEiJ_P0018984 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018985.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42632951 42649304 - MGP_WSBEiJ_P0018985 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018986.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42632951 42649285 - MGP_WSBEiJ_P0018986 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018987.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42633001 42649365 - MGP_WSBEiJ_P0018987 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018988.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42633002 42649383 - MGP_WSBEiJ_P0018988 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018989.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42633008 42648623 - MGP_WSBEiJ_P0018989 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018990.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42633170 42649375 - MGP_WSBEiJ_P0018990 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018991.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42634047 42649343 - MGP_WSBEiJ_P0018991 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018992.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42634163 42648955 - MGP_WSBEiJ_P0018992 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018993.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42634649 42649356 - MGP_WSBEiJ_P0018993 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018994.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42634655 42649379 - MGP_WSBEiJ_P0018994 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0018995.1 MGP_WSBEiJ_G0015400.1 mouse_genomes_project 1 42634661 42646937 - MGP_WSBEiJ_P0018995 Tex30 protein_coding protein_coding MGP_WSBEiJ_T0000595.1 MGP_WSBEiJ_G0000540.1 mouse_genomes_project 1 132692804 132694483 - TEC TEC MGP_WSBEiJ_T0002702.1 MGP_WSBEiJ_G0002576.1 mouse_genomes_project 1 16403954 16445386 - Gm15825 antisense antisense MGP_WSBEiJ_T0000459.1 MGP_WSBEiJ_G0000404.1 mouse_genomes_project 1 60076259 60077659 + TEC TEC MGP_WSBEiJ_T0021795.1 MGP_WSBEiJ_G0015968.1 mouse_genomes_project 1 142545802 142659481 - MGP_WSBEiJ_P0021795 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021796.1 MGP_WSBEiJ_G0015968.1 mouse_genomes_project 1 142659392 142660023 - protein_coding retained_intron MGP_WSBEiJ_T0009409.1 MGP_WSBEiJ_G0007566.1 mouse_genomes_project 1 182445466 182445587 - Gm27458 miRNA miRNA MGP_WSBEiJ_T0011785.1 MGP_WSBEiJ_G0009915.1 mouse_genomes_project 1 46097597 46098928 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005670.1 MGP_WSBEiJ_G0004759.1 mouse_genomes_project 1 62101606 62112653 - Gm4208 lincRNA lincRNA MGP_WSBEiJ_T0022391.1 MGP_WSBEiJ_G0016074.1 mouse_genomes_project 1 166272786 166301317 - MGP_WSBEiJ_P0022391 Fmo2 protein_coding protein_coding MGP_WSBEiJ_T0022392.1 MGP_WSBEiJ_G0016074.1 mouse_genomes_project 1 166272791 166285704 - Fmo2 protein_coding retained_intron MGP_WSBEiJ_T0022393.1 MGP_WSBEiJ_G0016074.1 mouse_genomes_project 1 166274935 166301270 - MGP_WSBEiJ_P0022393 Fmo2 protein_coding protein_coding MGP_WSBEiJ_T0022394.1 MGP_WSBEiJ_G0016074.1 mouse_genomes_project 1 166276536 166279189 - Fmo2 protein_coding processed_transcript MGP_WSBEiJ_T0022395.1 MGP_WSBEiJ_G0016074.1 mouse_genomes_project 1 166286757 166301089 - MGP_WSBEiJ_P0022395 Fmo2 protein_coding protein_coding MGP_WSBEiJ_T0022396.1 MGP_WSBEiJ_G0016074.1 mouse_genomes_project 1 166287267 166301331 - Fmo2 protein_coding retained_intron MGP_WSBEiJ_T0022397.1 MGP_WSBEiJ_G0016074.1 mouse_genomes_project 1 166300285 166301325 - Fmo2 protein_coding retained_intron MGP_WSBEiJ_T0021271.1 MGP_WSBEiJ_G0015854.1 mouse_genomes_project 1 132841347 132856501 + MGP_WSBEiJ_P0021271 Fcmr protein_coding protein_coding MGP_WSBEiJ_T0021272.1 MGP_WSBEiJ_G0015854.1 mouse_genomes_project 1 132841458 132850783 + Fcmr protein_coding processed_transcript MGP_WSBEiJ_T0021273.1 MGP_WSBEiJ_G0015854.1 mouse_genomes_project 1 132853830 132856489 + Fcmr protein_coding processed_transcript MGP_WSBEiJ_T0021274.1 MGP_WSBEiJ_G0015854.1 mouse_genomes_project 1 132854003 132856500 + Fcmr protein_coding processed_transcript MGP_WSBEiJ_T0019960.1 MGP_WSBEiJ_G0015587.1 mouse_genomes_project 1 74973853 74978983 + MGP_WSBEiJ_P0019960 Fam134a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019961.1 MGP_WSBEiJ_G0015587.1 mouse_genomes_project 1 74973861 74978987 + MGP_WSBEiJ_P0019961 Fam134a protein_coding protein_coding MGP_WSBEiJ_T0019962.1 MGP_WSBEiJ_G0015587.1 mouse_genomes_project 1 74973869 74978983 + MGP_WSBEiJ_P0019962 Fam134a protein_coding protein_coding MGP_WSBEiJ_T0019963.1 MGP_WSBEiJ_G0015587.1 mouse_genomes_project 1 74974055 74975737 + MGP_WSBEiJ_P0019963 Fam134a protein_coding protein_coding MGP_WSBEiJ_T0019964.1 MGP_WSBEiJ_G0015587.1 mouse_genomes_project 1 74974240 74978981 + MGP_WSBEiJ_P0019964 Fam134a protein_coding protein_coding MGP_WSBEiJ_T0019965.1 MGP_WSBEiJ_G0015587.1 mouse_genomes_project 1 74974257 74975450 + MGP_WSBEiJ_P0019965 Fam134a protein_coding protein_coding MGP_WSBEiJ_T0019966.1 MGP_WSBEiJ_G0015587.1 mouse_genomes_project 1 74974453 74975182 + Fam134a protein_coding retained_intron MGP_WSBEiJ_T0019967.1 MGP_WSBEiJ_G0015587.1 mouse_genomes_project 1 74976376 74976835 + MGP_WSBEiJ_P0019967 Fam134a protein_coding protein_coding MGP_WSBEiJ_T0011870.1 MGP_WSBEiJ_G0010000.1 mouse_genomes_project 1 70823886 70824661 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023673.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199836620 199873160 - MGP_WSBEiJ_P0023673 Cr1l protein_coding protein_coding MGP_WSBEiJ_T0023674.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199837897 199873139 - MGP_WSBEiJ_P0023674 Cr1l protein_coding protein_coding MGP_WSBEiJ_T0023675.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199843866 199848537 - Cr1l protein_coding retained_intron MGP_WSBEiJ_T0023676.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199843962 199873377 - MGP_WSBEiJ_P0023676 Cr1l protein_coding protein_coding MGP_WSBEiJ_T0023677.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199843968 199858768 - MGP_WSBEiJ_P0023677 Cr1l protein_coding protein_coding MGP_WSBEiJ_T0023678.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199855795 199871278 - Cr1l protein_coding retained_intron MGP_WSBEiJ_T0023679.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199855922 199873402 - MGP_WSBEiJ_P0023679 Cr1l protein_coding protein_coding MGP_WSBEiJ_T0023680.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199867726 199873350 - Cr1l protein_coding retained_intron MGP_WSBEiJ_T0023681.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199871009 199873146 - MGP_WSBEiJ_P0023681 Cr1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023682.1 MGP_WSBEiJ_G0016374.1 mouse_genomes_project 1 199871461 199873171 - Cr1l protein_coding retained_intron MGP_WSBEiJ_T0020323.1 MGP_WSBEiJ_G0015644.1 mouse_genomes_project 1 85087423 85119290 - MGP_WSBEiJ_P0020323 Slc16a14 protein_coding protein_coding MGP_WSBEiJ_T0020324.1 MGP_WSBEiJ_G0015644.1 mouse_genomes_project 1 85112982 85119013 - MGP_WSBEiJ_P0020324 Slc16a14 protein_coding protein_coding MGP_WSBEiJ_T0016487.1 MGP_WSBEiJ_G0014541.1 mouse_genomes_project 1 174507343 174522304 + Gm9929 processed_transcript processed_transcript MGP_WSBEiJ_T0011895.1 MGP_WSBEiJ_G0010025.1 mouse_genomes_project 1 83365754 83366595 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022664.1 MGP_WSBEiJ_G0016144.1 mouse_genomes_project 1 174560645 174572960 - MGP_WSBEiJ_P0022664 Fcrla protein_coding protein_coding MGP_WSBEiJ_T0022665.1 MGP_WSBEiJ_G0016144.1 mouse_genomes_project 1 174560944 174566291 - MGP_WSBEiJ_P0022665 Fcrla protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022666.1 MGP_WSBEiJ_G0016144.1 mouse_genomes_project 1 174560950 174572960 - MGP_WSBEiJ_P0022666 Fcrla protein_coding protein_coding MGP_WSBEiJ_T0022667.1 MGP_WSBEiJ_G0016144.1 mouse_genomes_project 1 174564817 174572932 - MGP_WSBEiJ_P0022667 Fcrla protein_coding protein_coding MGP_WSBEiJ_T0022668.1 MGP_WSBEiJ_G0016144.1 mouse_genomes_project 1 174565519 174572937 - MGP_WSBEiJ_P0022668 Fcrla protein_coding protein_coding MGP_WSBEiJ_T0022669.1 MGP_WSBEiJ_G0016144.1 mouse_genomes_project 1 174565539 174572911 - Fcrla protein_coding processed_transcript MGP_WSBEiJ_T0022593.1 MGP_WSBEiJ_G0016120.1 mouse_genomes_project 1 170840192 170858688 + MGP_WSBEiJ_P0022593 Aldh9a1 protein_coding protein_coding MGP_WSBEiJ_T0022594.1 MGP_WSBEiJ_G0016120.1 mouse_genomes_project 1 170840438 170844690 + Aldh9a1 protein_coding processed_transcript MGP_WSBEiJ_T0022595.1 MGP_WSBEiJ_G0016120.1 mouse_genomes_project 1 170840514 170846092 + Aldh9a1 protein_coding retained_intron MGP_WSBEiJ_T0022596.1 MGP_WSBEiJ_G0016120.1 mouse_genomes_project 1 170854330 170857804 + Aldh9a1 protein_coding retained_intron MGP_WSBEiJ_T0097597.1 MGP_WSBEiJ_G0036260.1 mouse_genomes_project 1 179864197 179864304 + Gm23805 snRNA snRNA MGP_WSBEiJ_T0019856.1 MGP_WSBEiJ_G0015565.1 mouse_genomes_project 1 74237042 74241426 + MGP_WSBEiJ_P0019856 protein_coding unknown_likely_coding MGP_WSBEiJ_T0019857.1 MGP_WSBEiJ_G0015565.1 mouse_genomes_project 1 74237306 74239213 + MGP_WSBEiJ_P0019857 protein_coding protein_coding MGP_WSBEiJ_T0011886.1 MGP_WSBEiJ_G0010016.1 mouse_genomes_project 1 80072892 80073156 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019739.1 MGP_WSBEiJ_G0015541.1 mouse_genomes_project 1 71256223 71278681 + MGP_WSBEiJ_P0019739 Atic protein_coding protein_coding MGP_WSBEiJ_T0019740.1 MGP_WSBEiJ_G0015541.1 mouse_genomes_project 1 71256252 71262276 + Atic protein_coding retained_intron MGP_WSBEiJ_T0019741.1 MGP_WSBEiJ_G0015541.1 mouse_genomes_project 1 71256252 71259029 + Atic protein_coding retained_intron MGP_WSBEiJ_T0019742.1 MGP_WSBEiJ_G0015541.1 mouse_genomes_project 1 71256252 71272445 + Atic protein_coding retained_intron MGP_WSBEiJ_T0019743.1 MGP_WSBEiJ_G0015541.1 mouse_genomes_project 1 71256286 71262276 + Atic protein_coding retained_intron MGP_WSBEiJ_T0019744.1 MGP_WSBEiJ_G0015541.1 mouse_genomes_project 1 71267943 71272042 + Atic protein_coding retained_intron MGP_WSBEiJ_T0098814.1 MGP_WSBEiJ_G0037477.1 mouse_genomes_project 1 164399892 164399968 + Gm25789 snoRNA snoRNA MGP_WSBEiJ_T0000706.1 MGP_WSBEiJ_G0000649.1 mouse_genomes_project 1 171907051 171909327 - TEC TEC MGP_WSBEiJ_T0005863.1 MGP_WSBEiJ_G0004913.1 mouse_genomes_project 1 158132808 158154483 - Gm9530 lincRNA lincRNA MGP_WSBEiJ_T0018275.1 MGP_WSBEiJ_G0015252.1 mouse_genomes_project 1 8121842 8440238 + MGP_WSBEiJ_P0018275 Prex2 protein_coding protein_coding MGP_WSBEiJ_T0018276.1 MGP_WSBEiJ_G0015252.1 mouse_genomes_project 1 8121895 8124965 + Prex2 protein_coding retained_intron MGP_WSBEiJ_T0018277.1 MGP_WSBEiJ_G0015252.1 mouse_genomes_project 1 8223846 8278084 + Prex2 protein_coding retained_intron MGP_WSBEiJ_T0018278.1 MGP_WSBEiJ_G0015252.1 mouse_genomes_project 1 8267738 8288601 + Prex2 protein_coding retained_intron MGP_WSBEiJ_T0018281.1 MGP_WSBEiJ_G0015252.1 mouse_genomes_project 1 8395888 8431369 + MGP_WSBEiJ_P0018281 Prex2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018282.1 MGP_WSBEiJ_G0015252.1 mouse_genomes_project 1 8414322 8431568 + MGP_WSBEiJ_P0018282 Prex2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018123.1 MGP_WSBEiJ_G0015230.1 mouse_genomes_project 1 1968262 2090234 - MGP_WSBEiJ_P0018123 Rgs20 protein_coding protein_coding MGP_WSBEiJ_T0018124.1 MGP_WSBEiJ_G0015230.1 mouse_genomes_project 1 1972493 2140697 - MGP_WSBEiJ_P0018124 Rgs20 protein_coding protein_coding MGP_WSBEiJ_T0018125.1 MGP_WSBEiJ_G0015230.1 mouse_genomes_project 1 1973299 2090234 - MGP_WSBEiJ_P0018125 Rgs20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018126.1 MGP_WSBEiJ_G0015230.1 mouse_genomes_project 1 1975167 2140694 - MGP_WSBEiJ_P0018126 Rgs20 protein_coding protein_coding MGP_WSBEiJ_T0018127.1 MGP_WSBEiJ_G0015230.1 mouse_genomes_project 1 1988450 2090234 - Rgs20 protein_coding retained_intron MGP_WSBEiJ_T0018128.1 MGP_WSBEiJ_G0015230.1 mouse_genomes_project 1 2132749 2140685 - Rgs20 protein_coding processed_transcript MGP_WSBEiJ_T0021455.1 MGP_WSBEiJ_G0015895.1 mouse_genomes_project 1 135403004 135423641 + MGP_WSBEiJ_P0021455 protein_coding protein_coding MGP_WSBEiJ_T0021456.1 MGP_WSBEiJ_G0015895.1 mouse_genomes_project 1 135403004 135423848 + MGP_WSBEiJ_P0021456 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021458.1 MGP_WSBEiJ_G0015895.1 mouse_genomes_project 1 135415864 135423848 + MGP_WSBEiJ_P0021458 protein_coding protein_coding MGP_WSBEiJ_T0021460.1 MGP_WSBEiJ_G0015895.1 mouse_genomes_project 1 135421155 135423669 + MGP_WSBEiJ_P0021460 protein_coding protein_coding MGP_WSBEiJ_T0005864.1 MGP_WSBEiJ_G0004914.1 mouse_genomes_project 1 158612253 158621930 - Gm5532 lincRNA lincRNA MGP_WSBEiJ_T0005865.1 MGP_WSBEiJ_G0004914.1 mouse_genomes_project 1 158618251 158621963 - Gm5532 lincRNA lincRNA MGP_WSBEiJ_T0005822.1 MGP_WSBEiJ_G0004881.1 mouse_genomes_project 1 136851131 136855367 - Gm26783 lincRNA lincRNA MGP_WSBEiJ_T0012070.1 MGP_WSBEiJ_G0010200.1 mouse_genomes_project 1 164245279 164245744 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020872.1 MGP_WSBEiJ_G0015768.1 mouse_genomes_project 1 97683423 97743654 - MGP_WSBEiJ_P0020872 Slco4c1 protein_coding protein_coding MGP_WSBEiJ_T0012097.1 MGP_WSBEiJ_G0010227.1 mouse_genomes_project 1 175020108 175020444 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000514.1 MGP_WSBEiJ_G0000459.1 mouse_genomes_project 1 84828601 84832682 - TEC TEC MGP_WSBEiJ_T0000470.1 MGP_WSBEiJ_G0000415.1 mouse_genomes_project 1 66106157 66107905 - TEC TEC MGP_WSBEiJ_T0011908.1 MGP_WSBEiJ_G0010038.1 mouse_genomes_project 1 91970059 91972043 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099968.1 MGP_WSBEiJ_G0038629.1 mouse_genomes_project 1 44512100 44525551 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099969.1 MGP_WSBEiJ_G0038629.1 mouse_genomes_project 1 44522950 44523566 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0019605.1 MGP_WSBEiJ_G0015514.1 mouse_genomes_project 1 64129753 64304160 - MGP_WSBEiJ_P0019605 Plekhm3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019606.1 MGP_WSBEiJ_G0015514.1 mouse_genomes_project 1 64132896 64304160 - MGP_WSBEiJ_P0019606 Plekhm3 protein_coding protein_coding MGP_WSBEiJ_T0019607.1 MGP_WSBEiJ_G0015514.1 mouse_genomes_project 1 64137577 64179590 - Plekhm3 protein_coding processed_transcript MGP_WSBEiJ_T0019608.1 MGP_WSBEiJ_G0015514.1 mouse_genomes_project 1 64204235 64272561 - Plekhm3 protein_coding retained_intron MGP_WSBEiJ_T0019609.1 MGP_WSBEiJ_G0015514.1 mouse_genomes_project 1 64284470 64304111 - MGP_WSBEiJ_P0019609 Plekhm3 protein_coding protein_coding MGP_WSBEiJ_T0019610.1 MGP_WSBEiJ_G0015514.1 mouse_genomes_project 1 64300499 64304063 - Plekhm3 protein_coding processed_transcript MGP_WSBEiJ_T0012032.1 MGP_WSBEiJ_G0010162.1 mouse_genomes_project 1 147811760 147812756 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021247.1 MGP_WSBEiJ_G0015847.1 mouse_genomes_project 1 132595424 132622226 - MGP_WSBEiJ_P0021247 C4bp protein_coding protein_coding MGP_WSBEiJ_T0021248.1 MGP_WSBEiJ_G0015847.1 mouse_genomes_project 1 132597465 132608811 - MGP_WSBEiJ_P0021248 C4bp protein_coding protein_coding MGP_WSBEiJ_T0021249.1 MGP_WSBEiJ_G0015847.1 mouse_genomes_project 1 132603658 132622204 - MGP_WSBEiJ_P0021249 C4bp protein_coding protein_coding MGP_WSBEiJ_T0021250.1 MGP_WSBEiJ_G0015847.1 mouse_genomes_project 1 132618365 132622218 - C4bp protein_coding retained_intron MGP_WSBEiJ_T0019228.1 MGP_WSBEiJ_G0015445.1 mouse_genomes_project 1 53963847 53970316 - MGP_WSBEiJ_P0019228 protein_coding protein_coding MGP_WSBEiJ_T0019229.1 MGP_WSBEiJ_G0015445.1 mouse_genomes_project 1 53966619 53970316 - MGP_WSBEiJ_P0019229 protein_coding protein_coding MGP_WSBEiJ_T0011876.1 MGP_WSBEiJ_G0010006.1 mouse_genomes_project 1 75384702 75385050 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022462.1 MGP_WSBEiJ_G0016093.1 mouse_genomes_project 1 167883496 167906041 - MGP_WSBEiJ_P0022462 Atp1b1 protein_coding protein_coding MGP_WSBEiJ_T0022463.1 MGP_WSBEiJ_G0016093.1 mouse_genomes_project 1 167887895 167890156 - Atp1b1 protein_coding processed_transcript MGP_WSBEiJ_T0022464.1 MGP_WSBEiJ_G0016093.1 mouse_genomes_project 1 167887895 167900241 - MGP_WSBEiJ_P0022464 Atp1b1 protein_coding protein_coding MGP_WSBEiJ_T0022465.1 MGP_WSBEiJ_G0016093.1 mouse_genomes_project 1 167899725 167905708 - Atp1b1 protein_coding retained_intron MGP_WSBEiJ_T0011062.1 MGP_WSBEiJ_G0009219.1 mouse_genomes_project 1 143795606 143795720 + Gm22016 misc_RNA misc_RNA MGP_WSBEiJ_T0023396.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189707256 189756707 + Eprs protein_coding retained_intron MGP_WSBEiJ_T0023397.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189707256 189775165 + MGP_WSBEiJ_P0023397 Eprs protein_coding protein_coding MGP_WSBEiJ_T0023398.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189707270 189711170 + Eprs protein_coding retained_intron MGP_WSBEiJ_T0023399.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189707344 189721142 + Eprs protein_coding retained_intron MGP_WSBEiJ_T0023400.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189707396 189726008 + MGP_WSBEiJ_P0023400 Eprs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023401.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189709684 189717493 + Eprs protein_coding retained_intron MGP_WSBEiJ_T0023402.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189711786 189723054 + MGP_WSBEiJ_P0023402 Eprs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023403.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189711793 189718513 + Eprs protein_coding retained_intron MGP_WSBEiJ_T0023404.1 MGP_WSBEiJ_G0016322.1 mouse_genomes_project 1 189746397 189750053 + Eprs protein_coding retained_intron MGP_WSBEiJ_T0000654.1 MGP_WSBEiJ_G0000597.1 mouse_genomes_project 1 156439906 156440726 + TEC TEC MGP_WSBEiJ_T0011955.1 MGP_WSBEiJ_G0010085.1 mouse_genomes_project 1 112674718 112675499 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022990.1 MGP_WSBEiJ_G0016232.1 mouse_genomes_project 1 178107238 178189885 + MGP_WSBEiJ_P0022990 Spta1 protein_coding protein_coding MGP_WSBEiJ_T0022991.1 MGP_WSBEiJ_G0016232.1 mouse_genomes_project 1 178159635 178188986 + Spta1 protein_coding retained_intron MGP_WSBEiJ_T0021335.1 MGP_WSBEiJ_G0015871.1 mouse_genomes_project 1 133835220 133837997 + Slc41a1 protein_coding processed_transcript MGP_WSBEiJ_T0021336.1 MGP_WSBEiJ_G0015871.1 mouse_genomes_project 1 133835704 133856541 + MGP_WSBEiJ_P0021336 Slc41a1 protein_coding protein_coding MGP_WSBEiJ_T0021337.1 MGP_WSBEiJ_G0015871.1 mouse_genomes_project 1 133850544 133854335 + Slc41a1 protein_coding retained_intron MGP_WSBEiJ_T0011050.1 MGP_WSBEiJ_G0009207.1 mouse_genomes_project 1 46376119 46376389 - Gm23829 misc_RNA misc_RNA MGP_WSBEiJ_T0011681.1 MGP_WSBEiJ_G0009811.1 mouse_genomes_project 1 8353832 8354441 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011679.1 MGP_WSBEiJ_G0009809.1 mouse_genomes_project 1 7691779 7692419 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011892.1 MGP_WSBEiJ_G0010022.1 mouse_genomes_project 1 82940980 82941371 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021301.1 MGP_WSBEiJ_G0015863.1 mouse_genomes_project 1 133262356 133273138 - Ikbke protein_coding retained_intron MGP_WSBEiJ_T0021302.1 MGP_WSBEiJ_G0015863.1 mouse_genomes_project 1 133262611 133288665 - MGP_WSBEiJ_P0021302 Ikbke protein_coding protein_coding MGP_WSBEiJ_T0021303.1 MGP_WSBEiJ_G0015863.1 mouse_genomes_project 1 133267033 133274295 - Ikbke protein_coding retained_intron MGP_WSBEiJ_T0021304.1 MGP_WSBEiJ_G0015863.1 mouse_genomes_project 1 133271355 133278549 - Ikbke protein_coding retained_intron MGP_WSBEiJ_T0021305.1 MGP_WSBEiJ_G0015863.1 mouse_genomes_project 1 133278905 133280564 - Ikbke protein_coding retained_intron MGP_WSBEiJ_T0021306.1 MGP_WSBEiJ_G0015863.1 mouse_genomes_project 1 133281814 133285928 - MGP_WSBEiJ_P0021306 Ikbke protein_coding protein_coding MGP_WSBEiJ_T0098818.1 MGP_WSBEiJ_G0037481.1 mouse_genomes_project 1 168933494 168933579 + Gm24637 snoRNA snoRNA MGP_WSBEiJ_T0011947.1 MGP_WSBEiJ_G0010077.1 mouse_genomes_project 1 109840534 109840712 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005754.1 MGP_WSBEiJ_G0004826.1 mouse_genomes_project 1 93305965 93308226 + Gm28479 lincRNA lincRNA MGP_WSBEiJ_T0018632.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34182838 34286837 - MGP_WSBEiJ_P0018632 Uggt1 protein_coding protein_coding MGP_WSBEiJ_T0018633.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34186293 34208682 - Uggt1 protein_coding retained_intron MGP_WSBEiJ_T0018634.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34186297 34286693 - MGP_WSBEiJ_P0018634 Uggt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018635.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34188950 34193375 - Uggt1 protein_coding retained_intron MGP_WSBEiJ_T0018636.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34204595 34216637 - MGP_WSBEiJ_P0018636 Uggt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018637.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34205074 34225525 - MGP_WSBEiJ_P0018637 Uggt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018638.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34206220 34207812 - Uggt1 protein_coding retained_intron MGP_WSBEiJ_T0018639.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34221766 34286639 - Uggt1 protein_coding retained_intron MGP_WSBEiJ_T0018640.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34228780 34252623 - MGP_WSBEiJ_P0018640 Uggt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018641.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34238865 34250768 - Uggt1 protein_coding retained_intron MGP_WSBEiJ_T0018642.1 MGP_WSBEiJ_G0015332.1 mouse_genomes_project 1 34286170 34287252 - Uggt1 protein_coding retained_intron MGP_WSBEiJ_T0096878.1 MGP_WSBEiJ_G0035559.1 mouse_genomes_project 1 82742011 82742109 + n-R5s213 rRNA rRNA MGP_WSBEiJ_T0005664.1 MGP_WSBEiJ_G0004753.1 mouse_genomes_project 1 60477847 60484071 - Gm28083 lincRNA lincRNA MGP_WSBEiJ_T0022642.1 MGP_WSBEiJ_G0016136.1 mouse_genomes_project 1 173905696 173913812 - MGP_WSBEiJ_P0022642 Gm7694 protein_coding protein_coding MGP_WSBEiJ_T0000474.1 MGP_WSBEiJ_G0000419.1 mouse_genomes_project 1 66216621 66217760 - TEC TEC MGP_WSBEiJ_T0002772.1 MGP_WSBEiJ_G0002629.1 mouse_genomes_project 1 75205083 75211831 - Gm15179 antisense antisense MGP_WSBEiJ_T0002773.1 MGP_WSBEiJ_G0002629.1 mouse_genomes_project 1 75205143 75207317 - Gm15179 antisense antisense MGP_WSBEiJ_T0020243.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82842925 82870969 + MGP_WSBEiJ_P0020243 Mff protein_coding unknown_likely_coding MGP_WSBEiJ_T0020244.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82842944 82870959 + MGP_WSBEiJ_P0020244 Mff protein_coding protein_coding MGP_WSBEiJ_T0020245.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82842972 82854124 + Mff protein_coding processed_transcript MGP_WSBEiJ_T0020246.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82842973 82870956 + MGP_WSBEiJ_P0020246 Mff protein_coding protein_coding MGP_WSBEiJ_T0020247.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82842979 82870959 + MGP_WSBEiJ_P0020247 Mff protein_coding protein_coding MGP_WSBEiJ_T0020248.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82842988 82855345 + Mff protein_coding retained_intron MGP_WSBEiJ_T0020249.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82842994 82870919 + MGP_WSBEiJ_P0020249 Mff protein_coding protein_coding MGP_WSBEiJ_T0020250.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82843002 82870963 + MGP_WSBEiJ_P0020250 Mff protein_coding protein_coding MGP_WSBEiJ_T0020251.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82847283 82870959 + MGP_WSBEiJ_P0020251 Mff protein_coding protein_coding MGP_WSBEiJ_T0020252.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82847326 82870196 + MGP_WSBEiJ_P0020252 Mff protein_coding protein_coding MGP_WSBEiJ_T0020253.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82847380 82860466 + MGP_WSBEiJ_P0020253 Mff protein_coding protein_coding MGP_WSBEiJ_T0020254.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82847380 82869135 + MGP_WSBEiJ_P0020254 Mff protein_coding protein_coding MGP_WSBEiJ_T0020255.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82854086 82870727 + MGP_WSBEiJ_P0020255 Mff protein_coding protein_coding MGP_WSBEiJ_T0020256.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82860220 82870274 + Mff protein_coding retained_intron MGP_WSBEiJ_T0020257.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82860559 82864476 + Mff protein_coding retained_intron MGP_WSBEiJ_T0020258.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82865504 82870455 + Mff protein_coding retained_intron MGP_WSBEiJ_T0020259.1 MGP_WSBEiJ_G0015632.1 mouse_genomes_project 1 82866947 82870283 + Mff protein_coding retained_intron MGP_WSBEiJ_T0000520.1 MGP_WSBEiJ_G0000465.1 mouse_genomes_project 1 87082943 87085893 + TEC TEC MGP_WSBEiJ_T0019419.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58640352 58764835 + MGP_WSBEiJ_P0019419 Gm973 protein_coding protein_coding MGP_WSBEiJ_T0019420.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58649089 58651778 + MGP_WSBEiJ_P0019420 Gm973 protein_coding protein_coding MGP_WSBEiJ_T0019421.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58649453 58726634 + MGP_WSBEiJ_P0019421 Gm973 protein_coding unknown_likely_coding MGP_WSBEiJ_T0019422.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58670481 58683671 + Gm973 protein_coding retained_intron MGP_WSBEiJ_T0019423.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58676292 58690438 + Gm973 protein_coding processed_transcript MGP_WSBEiJ_T0019424.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58685384 58694279 + Gm973 protein_coding retained_intron MGP_WSBEiJ_T0019426.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58736982 58758478 + Gm973 protein_coding processed_transcript MGP_WSBEiJ_T0019427.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58737016 58760628 + Gm973 protein_coding processed_transcript MGP_WSBEiJ_T0019428.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58749614 58758460 + Gm973 protein_coding processed_transcript MGP_WSBEiJ_T0019429.1 MGP_WSBEiJ_G0015482.1 mouse_genomes_project 1 58760647 58766737 + MGP_WSBEiJ_P0019429 Gm973 protein_coding protein_coding MGP_WSBEiJ_T0018224.1 MGP_WSBEiJ_G0015247.1 mouse_genomes_project 1 7110743 7127728 - MGP_WSBEiJ_P0018224 Ppp1r42 protein_coding protein_coding MGP_WSBEiJ_T0018225.1 MGP_WSBEiJ_G0015247.1 mouse_genomes_project 1 7110743 7149443 - MGP_WSBEiJ_P0018225 Ppp1r42 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018226.1 MGP_WSBEiJ_G0015247.1 mouse_genomes_project 1 7110939 7157709 - MGP_WSBEiJ_P0018226 Ppp1r42 protein_coding protein_coding MGP_WSBEiJ_T0018227.1 MGP_WSBEiJ_G0015247.1 mouse_genomes_project 1 7110944 7157657 - MGP_WSBEiJ_P0018227 Ppp1r42 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018228.1 MGP_WSBEiJ_G0015247.1 mouse_genomes_project 1 7140260 7157657 - Ppp1r42 protein_coding retained_intron MGP_WSBEiJ_T0011672.1 MGP_WSBEiJ_G0009802.1 mouse_genomes_project 1 6352136 6352654 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098758.1 MGP_WSBEiJ_G0037421.1 mouse_genomes_project 1 58835065 58835146 + Gm26287 snoRNA snoRNA MGP_WSBEiJ_T0096881.1 MGP_WSBEiJ_G0035562.1 mouse_genomes_project 1 90106345 90106460 + Gm25180 rRNA rRNA MGP_WSBEiJ_T0022332.1 MGP_WSBEiJ_G0016065.1 mouse_genomes_project 1 165354794 165359729 + MGP_WSBEiJ_P0022332 Pigc protein_coding protein_coding MGP_WSBEiJ_T0022333.1 MGP_WSBEiJ_G0016065.1 mouse_genomes_project 1 165354796 165358624 + MGP_WSBEiJ_P0022333 Pigc protein_coding protein_coding MGP_WSBEiJ_T0022334.1 MGP_WSBEiJ_G0016065.1 mouse_genomes_project 1 165354836 165359728 + MGP_WSBEiJ_P0022334 Pigc protein_coding protein_coding MGP_WSBEiJ_T0022335.1 MGP_WSBEiJ_G0016065.1 mouse_genomes_project 1 165354907 165357162 + MGP_WSBEiJ_P0022335 Pigc protein_coding protein_coding MGP_WSBEiJ_T0022336.1 MGP_WSBEiJ_G0016065.1 mouse_genomes_project 1 165354910 165356821 + MGP_WSBEiJ_P0022336 Pigc protein_coding protein_coding MGP_WSBEiJ_T0000532.1 MGP_WSBEiJ_G0000477.1 mouse_genomes_project 1 90797872 90799219 - TEC TEC MGP_WSBEiJ_T0097592.1 MGP_WSBEiJ_G0036255.1 mouse_genomes_project 1 175158968 175159084 - Gm24871 snRNA snRNA MGP_WSBEiJ_T0005611.1 MGP_WSBEiJ_G0004719.1 mouse_genomes_project 1 39902567 39906805 - lincRNA lincRNA MGP_WSBEiJ_T0005902.1 MGP_WSBEiJ_G0004944.1 mouse_genomes_project 1 174623050 174629365 + Gm10522 lincRNA lincRNA MGP_WSBEiJ_T0005961.1 MGP_WSBEiJ_G0004989.1 mouse_genomes_project 1 195195234 195205434 + Gm30932 lincRNA lincRNA MGP_WSBEiJ_T0011940.1 MGP_WSBEiJ_G0010070.1 mouse_genomes_project 1 107231821 107232769 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012140.1 MGP_WSBEiJ_G0010270.1 mouse_genomes_project 1 199559142 199559500 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022318.1 MGP_WSBEiJ_G0016060.1 mouse_genomes_project 1 164765430 164788995 + MGP_WSBEiJ_P0022318 Tnfsf4 protein_coding protein_coding MGP_WSBEiJ_T0100432.1 MGP_WSBEiJ_G0038891.1 mouse_genomes_project 1 177872430 177917244 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098796.1 MGP_WSBEiJ_G0037459.1 mouse_genomes_project 1 142458961 142459103 + Gm26048 snoRNA snoRNA MGP_WSBEiJ_T0002792.1 MGP_WSBEiJ_G0002648.1 mouse_genomes_project 1 94409274 94410591 + Gm28536 antisense antisense MGP_WSBEiJ_T0011747.1 MGP_WSBEiJ_G0009877.1 mouse_genomes_project 1 32612408 32613803 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009353.1 MGP_WSBEiJ_G0007510.1 mouse_genomes_project 1 74041245 74041312 - Mir1928 miRNA miRNA MGP_WSBEiJ_T0020553.1 MGP_WSBEiJ_G0015696.1 mouse_genomes_project 1 88983293 88994629 - MGP_WSBEiJ_P0020553 Glrp1 protein_coding protein_coding MGP_WSBEiJ_T0097523.1 MGP_WSBEiJ_G0036186.1 mouse_genomes_project 1 17786906 17787008 - Gm24162 snRNA snRNA MGP_WSBEiJ_T0011068.1 MGP_WSBEiJ_G0009225.1 mouse_genomes_project 1 195829151 195829259 + Gm24748 misc_RNA misc_RNA MGP_WSBEiJ_T0012011.1 MGP_WSBEiJ_G0010141.1 mouse_genomes_project 1 138837266 138837638 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016400.1 MGP_WSBEiJ_G0014517.1 mouse_genomes_project 1 55914260 55918090 + 9130024F11Rik processed_transcript antisense MGP_WSBEiJ_T0016401.1 MGP_WSBEiJ_G0014517.1 mouse_genomes_project 1 55914376 55916506 + 9130024F11Rik processed_transcript antisense MGP_WSBEiJ_T0016402.1 MGP_WSBEiJ_G0014517.1 mouse_genomes_project 1 55914378 55990452 + 9130024F11Rik processed_transcript antisense MGP_WSBEiJ_T0016403.1 MGP_WSBEiJ_G0014517.1 mouse_genomes_project 1 55915231 55918086 + 9130024F11Rik processed_transcript TEC MGP_WSBEiJ_T0016404.1 MGP_WSBEiJ_G0014517.1 mouse_genomes_project 1 55988332 55997989 + 9130024F11Rik processed_transcript antisense MGP_WSBEiJ_T0011755.1 MGP_WSBEiJ_G0009885.1 mouse_genomes_project 1 33990678 33991582 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000550.1 MGP_WSBEiJ_G0000495.1 mouse_genomes_project 1 106836393 106840770 + TEC TEC MGP_WSBEiJ_T0005769.1 MGP_WSBEiJ_G0004838.1 mouse_genomes_project 1 102171875 102188144 + Gm20268 lincRNA lincRNA MGP_WSBEiJ_T0020214.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80495183 80774089 - MGP_WSBEiJ_P0020214 Dock10 protein_coding protein_coding MGP_WSBEiJ_T0020215.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80495298 80599152 - MGP_WSBEiJ_P0020215 Dock10 protein_coding protein_coding MGP_WSBEiJ_T0020216.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80495663 80679133 - MGP_WSBEiJ_P0020216 Dock10 protein_coding protein_coding MGP_WSBEiJ_T0020217.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80495751 80529270 - MGP_WSBEiJ_P0020217 Dock10 protein_coding protein_coding MGP_WSBEiJ_T0020218.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80495823 80679099 - MGP_WSBEiJ_P0020218 Dock10 protein_coding protein_coding MGP_WSBEiJ_T0020219.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80497014 80500456 - Dock10 protein_coding retained_intron MGP_WSBEiJ_T0020220.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80519899 80521781 - Dock10 protein_coding retained_intron MGP_WSBEiJ_T0020221.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80588052 80774168 - Dock10 protein_coding retained_intron MGP_WSBEiJ_T0020222.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80592438 80718215 - MGP_WSBEiJ_P0020222 Dock10 protein_coding protein_coding MGP_WSBEiJ_T0020223.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80598920 80679116 - MGP_WSBEiJ_P0020223 Dock10 protein_coding protein_coding MGP_WSBEiJ_T0020224.1 MGP_WSBEiJ_G0015625.1 mouse_genomes_project 1 80653999 80774128 - Dock10 protein_coding retained_intron MGP_WSBEiJ_T0097258.1 MGP_WSBEiJ_G0035938.1 mouse_genomes_project 1 191542130 191545617 - Gm15509 sense_intronic sense_intronic MGP_WSBEiJ_T0000575.1 MGP_WSBEiJ_G0000520.1 mouse_genomes_project 1 126513552 126516800 - TEC TEC MGP_WSBEiJ_T0012019.1 MGP_WSBEiJ_G0010149.1 mouse_genomes_project 1 141422476 141423032 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005695.1 MGP_WSBEiJ_G0004778.1 mouse_genomes_project 1 71989334 72025483 + D230017M19Rik lincRNA lincRNA MGP_WSBEiJ_T0005696.1 MGP_WSBEiJ_G0004778.1 mouse_genomes_project 1 71997942 72034374 + D230017M19Rik lincRNA lincRNA MGP_WSBEiJ_T0005697.1 MGP_WSBEiJ_G0004778.1 mouse_genomes_project 1 72023975 72026521 + D230017M19Rik lincRNA lincRNA MGP_WSBEiJ_T0020419.1 MGP_WSBEiJ_G0015668.1 mouse_genomes_project 1 86974709 87026048 + Dis3l2 protein_coding processed_transcript MGP_WSBEiJ_T0020420.1 MGP_WSBEiJ_G0015668.1 mouse_genomes_project 1 86974720 87366351 + MGP_WSBEiJ_P0020420 Dis3l2 protein_coding protein_coding MGP_WSBEiJ_T0020421.1 MGP_WSBEiJ_G0015668.1 mouse_genomes_project 1 86974729 87167901 + Dis3l2 protein_coding retained_intron MGP_WSBEiJ_T0020422.1 MGP_WSBEiJ_G0015668.1 mouse_genomes_project 1 86974729 87365451 + MGP_WSBEiJ_P0020422 Dis3l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020423.1 MGP_WSBEiJ_G0015668.1 mouse_genomes_project 1 86974744 87366348 + MGP_WSBEiJ_P0020423 Dis3l2 protein_coding protein_coding MGP_WSBEiJ_T0020424.1 MGP_WSBEiJ_G0015668.1 mouse_genomes_project 1 87139781 87140516 + Dis3l2 protein_coding retained_intron MGP_WSBEiJ_T0022436.1 MGP_WSBEiJ_G0016087.1 mouse_genomes_project 1 167551316 167589171 + MGP_WSBEiJ_P0022436 Selp protein_coding protein_coding MGP_WSBEiJ_T0022437.1 MGP_WSBEiJ_G0016087.1 mouse_genomes_project 1 167580448 167581923 + Selp protein_coding retained_intron MGP_WSBEiJ_T0022438.1 MGP_WSBEiJ_G0016087.1 mouse_genomes_project 1 167581007 167588210 + MGP_WSBEiJ_P0022438 Selp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022439.1 MGP_WSBEiJ_G0016087.1 mouse_genomes_project 1 167583832 167589156 + Selp protein_coding retained_intron MGP_WSBEiJ_T0022440.1 MGP_WSBEiJ_G0016087.1 mouse_genomes_project 1 167585829 167588223 + Selp protein_coding retained_intron MGP_WSBEiJ_T0018608.1 MGP_WSBEiJ_G0015325.1 mouse_genomes_project 1 32526045 32535121 + MGP_WSBEiJ_P0018608 Cfc1 protein_coding protein_coding MGP_WSBEiJ_T0011928.1 MGP_WSBEiJ_G0010058.1 mouse_genomes_project 1 102391976 102392681 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005796.1 MGP_WSBEiJ_G0004859.1 mouse_genomes_project 1 122312293 122333904 + Gm29345 lincRNA lincRNA MGP_WSBEiJ_T0022400.1 MGP_WSBEiJ_G0016076.1 mouse_genomes_project 1 166362242 166386158 - MGP_WSBEiJ_P0022400 Fmo3 protein_coding protein_coding MGP_WSBEiJ_T0022401.1 MGP_WSBEiJ_G0016076.1 mouse_genomes_project 1 166372461 166386159 - Fmo3 protein_coding retained_intron MGP_WSBEiJ_T0000775.1 MGP_WSBEiJ_G0000715.1 mouse_genomes_project 1 199410962 199414526 + TEC TEC MGP_WSBEiJ_T0000607.1 MGP_WSBEiJ_G0000551.1 mouse_genomes_project 1 136643779 136644761 - TEC TEC MGP_WSBEiJ_T0000475.1 MGP_WSBEiJ_G0000420.1 mouse_genomes_project 1 66229232 66232224 + TEC TEC MGP_WSBEiJ_T0011997.1 MGP_WSBEiJ_G0010127.1 mouse_genomes_project 1 128811236 128811950 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000386.1 MGP_WSBEiJ_G0000332.1 mouse_genomes_project 1 23198625 23202621 - TEC TEC MGP_WSBEiJ_T0097250.1 MGP_WSBEiJ_G0035930.1 mouse_genomes_project 1 141409600 141411056 + 4930596I21Rik sense_intronic sense_intronic MGP_WSBEiJ_T0018197.1 MGP_WSBEiJ_G0015242.1 mouse_genomes_project 1 6788045 6823908 - MGP_WSBEiJ_P0018197 Mybl1 protein_coding protein_coding MGP_WSBEiJ_T0018198.1 MGP_WSBEiJ_G0015242.1 mouse_genomes_project 1 6790167 6823723 - MGP_WSBEiJ_P0018198 Mybl1 protein_coding protein_coding MGP_WSBEiJ_T0018199.1 MGP_WSBEiJ_G0015242.1 mouse_genomes_project 1 6796762 6800225 - Mybl1 protein_coding retained_intron MGP_WSBEiJ_T0018200.1 MGP_WSBEiJ_G0015242.1 mouse_genomes_project 1 6799886 6805071 - Mybl1 protein_coding retained_intron MGP_WSBEiJ_T0018201.1 MGP_WSBEiJ_G0015242.1 mouse_genomes_project 1 6803477 6823353 - MGP_WSBEiJ_P0018201 Mybl1 protein_coding protein_coding MGP_WSBEiJ_T0005610.1 MGP_WSBEiJ_G0004718.1 mouse_genomes_project 1 39499024 39514020 - 4930448I06Rik lincRNA lincRNA MGP_WSBEiJ_T0000557.1 MGP_WSBEiJ_G0000502.1 mouse_genomes_project 1 112214078 112217724 - TEC TEC MGP_WSBEiJ_T0002893.1 MGP_WSBEiJ_G0002724.1 mouse_genomes_project 1 182392532 182398025 - B230369F24Rik antisense antisense MGP_WSBEiJ_T0020966.1 MGP_WSBEiJ_G0015788.1 mouse_genomes_project 1 108136542 108158126 + MGP_WSBEiJ_P0020966 Serpinb13 protein_coding protein_coding MGP_WSBEiJ_T0020967.1 MGP_WSBEiJ_G0015788.1 mouse_genomes_project 1 108136552 108157829 + MGP_WSBEiJ_P0020967 Serpinb13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0016457.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395133 164398239 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016458.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395316 164400127 + Gas5 processed_transcript lincRNA MGP_WSBEiJ_T0016459.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395638 164400123 + Gas5 processed_transcript lincRNA MGP_WSBEiJ_T0016460.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395776 164400125 + Gas5 processed_transcript lincRNA MGP_WSBEiJ_T0016461.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395872 164400121 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016462.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395872 164398254 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016463.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395872 164400125 + Gas5 processed_transcript lincRNA MGP_WSBEiJ_T0016464.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395875 164400127 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016465.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395875 164400127 + Gas5 processed_transcript lincRNA MGP_WSBEiJ_T0016466.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395875 164397763 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016467.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395875 164400122 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016468.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395876 164399831 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016469.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395877 164398268 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016470.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395881 164397334 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016471.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395887 164400127 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016472.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395893 164400127 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016473.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395895 164400063 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016474.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164395897 164400127 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016475.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164396729 164397595 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016476.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164397401 164400127 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016477.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164397996 164400120 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016478.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164398017 164399710 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016479.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164398057 164400123 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016480.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164399301 164400125 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0016481.1 MGP_WSBEiJ_G0014537.1 mouse_genomes_project 1 164399363 164400127 + Gas5 processed_transcript retained_intron MGP_WSBEiJ_T0097255.1 MGP_WSBEiJ_G0035935.1 mouse_genomes_project 1 164070091 164070731 - Gm37328 sense_intronic sense_intronic MGP_WSBEiJ_T0100387.1 MGP_WSBEiJ_G0038846.1 mouse_genomes_project 1 18759566 18760649 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0022613.1 MGP_WSBEiJ_G0016127.1 mouse_genomes_project 1 173218925 173259098 + MGP_WSBEiJ_P0022613 Rgs5 protein_coding protein_coding MGP_WSBEiJ_T0022614.1 MGP_WSBEiJ_G0016127.1 mouse_genomes_project 1 173218946 173247231 + MGP_WSBEiJ_P0022614 Rgs5 protein_coding protein_coding MGP_WSBEiJ_T0100431.1 MGP_WSBEiJ_G0038890.1 mouse_genomes_project 1 177870940 177872575 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011918.1 MGP_WSBEiJ_G0010048.1 mouse_genomes_project 1 97882777 97883741 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002739.1 MGP_WSBEiJ_G0002607.1 mouse_genomes_project 1 54117610 54128059 + Gm10561 antisense antisense MGP_WSBEiJ_T0011770.1 MGP_WSBEiJ_G0009900.1 mouse_genomes_project 1 42563706 42563886 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022513.1 MGP_WSBEiJ_G0016104.1 mouse_genomes_project 1 169133139 169201439 - MGP_WSBEiJ_P0022513 Rcsd1 protein_coding protein_coding MGP_WSBEiJ_T0022514.1 MGP_WSBEiJ_G0016104.1 mouse_genomes_project 1 169135563 169201401 - MGP_WSBEiJ_P0022514 Rcsd1 protein_coding protein_coding MGP_WSBEiJ_T0022515.1 MGP_WSBEiJ_G0016104.1 mouse_genomes_project 1 169155208 169202746 - MGP_WSBEiJ_P0022515 Rcsd1 protein_coding protein_coding MGP_WSBEiJ_T0022516.1 MGP_WSBEiJ_G0016104.1 mouse_genomes_project 1 169197873 169203079 - Rcsd1 protein_coding retained_intron MGP_WSBEiJ_T0022517.1 MGP_WSBEiJ_G0016104.1 mouse_genomes_project 1 169201791 169203110 - Rcsd1 protein_coding processed_transcript MGP_WSBEiJ_T0011674.1 MGP_WSBEiJ_G0009804.1 mouse_genomes_project 1 6543245 6543881 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018534.1 MGP_WSBEiJ_G0015314.1 mouse_genomes_project 1 30043920 30581279 + MGP_WSBEiJ_P0018534 Khdrbs2 protein_coding protein_coding MGP_WSBEiJ_T0018535.1 MGP_WSBEiJ_G0015314.1 mouse_genomes_project 1 30043935 30124546 + MGP_WSBEiJ_P0018535 Khdrbs2 protein_coding protein_coding MGP_WSBEiJ_T0018536.1 MGP_WSBEiJ_G0015314.1 mouse_genomes_project 1 30043954 30217828 + MGP_WSBEiJ_P0018536 Khdrbs2 protein_coding protein_coding MGP_WSBEiJ_T0018537.1 MGP_WSBEiJ_G0015314.1 mouse_genomes_project 1 30044093 30187935 + MGP_WSBEiJ_P0018537 Khdrbs2 protein_coding protein_coding MGP_WSBEiJ_T0018538.1 MGP_WSBEiJ_G0015314.1 mouse_genomes_project 1 30191807 30298493 + Khdrbs2 protein_coding processed_transcript MGP_WSBEiJ_T0021592.1 MGP_WSBEiJ_G0015927.1 mouse_genomes_project 1 137218741 137347385 - MGP_WSBEiJ_P0021592 Lgr6 protein_coding protein_coding MGP_WSBEiJ_T0021593.1 MGP_WSBEiJ_G0015927.1 mouse_genomes_project 1 137218749 137347659 - MGP_WSBEiJ_P0021593 Lgr6 protein_coding protein_coding MGP_WSBEiJ_T0021594.1 MGP_WSBEiJ_G0015927.1 mouse_genomes_project 1 137240009 137258812 - Lgr6 protein_coding processed_transcript MGP_WSBEiJ_T0098731.1 MGP_WSBEiJ_G0037394.1 mouse_genomes_project 1 12246386 12246506 - Gm26345 snoRNA snoRNA MGP_WSBEiJ_T0020300.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84882623 84979728 - MGP_WSBEiJ_P0020300 Trip12 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020301.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84883022 85009104 - MGP_WSBEiJ_P0020301 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0020302.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84883022 85007892 - MGP_WSBEiJ_P0020302 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0020303.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84886097 84912086 - MGP_WSBEiJ_P0020303 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0020304.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84886097 85007876 - MGP_WSBEiJ_P0020304 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0020305.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84886410 84893668 - MGP_WSBEiJ_P0020305 Trip12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020306.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84888043 84890839 - Trip12 protein_coding retained_intron MGP_WSBEiJ_T0020307.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84890569 84893739 - Trip12 protein_coding retained_intron MGP_WSBEiJ_T0020308.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84907554 84917201 - MGP_WSBEiJ_P0020308 Trip12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020309.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84911966 84913352 - Trip12 protein_coding retained_intron MGP_WSBEiJ_T0020310.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84912027 85007899 - MGP_WSBEiJ_P0020310 Trip12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020311.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84917199 85007892 - MGP_WSBEiJ_P0020311 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0020312.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84919446 84922982 - Trip12 protein_coding retained_intron MGP_WSBEiJ_T0020313.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84929906 84930671 - Trip12 protein_coding retained_intron MGP_WSBEiJ_T0020314.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84929942 84957558 - MGP_WSBEiJ_P0020314 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0020315.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84946370 84948308 - Trip12 protein_coding retained_intron MGP_WSBEiJ_T0020316.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84946836 85007889 - MGP_WSBEiJ_P0020316 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0020317.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84957993 85008854 - MGP_WSBEiJ_P0020317 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0020318.1 MGP_WSBEiJ_G0015642.1 mouse_genomes_project 1 84958237 85007629 - MGP_WSBEiJ_P0020318 Trip12 protein_coding protein_coding MGP_WSBEiJ_T0012084.1 MGP_WSBEiJ_G0010214.1 mouse_genomes_project 1 169550637 169550994 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011917.1 MGP_WSBEiJ_G0010047.1 mouse_genomes_project 1 97510745 97511496 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022050.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158237009 158286175 + MGP_WSBEiJ_P0022050 Stx6 protein_coding protein_coding MGP_WSBEiJ_T0022051.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158237013 158282457 + MGP_WSBEiJ_P0022051 Stx6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022052.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158237042 158278766 + MGP_WSBEiJ_P0022052 Stx6 protein_coding protein_coding MGP_WSBEiJ_T0022053.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158237065 158272020 + Stx6 protein_coding processed_transcript MGP_WSBEiJ_T0022054.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158237093 158258489 + Stx6 protein_coding retained_intron MGP_WSBEiJ_T0022055.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158264825 158268827 + Stx6 protein_coding retained_intron MGP_WSBEiJ_T0022056.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158267869 158282535 + Stx6 protein_coding retained_intron MGP_WSBEiJ_T0022057.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158268314 158274262 + Stx6 protein_coding retained_intron MGP_WSBEiJ_T0022058.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158272001 158288784 + MGP_WSBEiJ_P0022058 Stx6 protein_coding protein_coding MGP_WSBEiJ_T0022059.1 MGP_WSBEiJ_G0016019.1 mouse_genomes_project 1 158275523 158282760 + Stx6 protein_coding processed_transcript MGP_WSBEiJ_T0011854.1 MGP_WSBEiJ_G0009984.1 mouse_genomes_project 1 64280854 64281233 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018919.1 MGP_WSBEiJ_G0015384.1 mouse_genomes_project 1 38873880 38931649 + MGP_WSBEiJ_P0018919 Slc9a4 protein_coding protein_coding MGP_WSBEiJ_T0018920.1 MGP_WSBEiJ_G0015384.1 mouse_genomes_project 1 38874003 38879220 + Slc9a4 protein_coding processed_transcript MGP_WSBEiJ_T0018921.1 MGP_WSBEiJ_G0015384.1 mouse_genomes_project 1 38898817 38901122 + Slc9a4 protein_coding processed_transcript MGP_WSBEiJ_T0018922.1 MGP_WSBEiJ_G0015384.1 mouse_genomes_project 1 38929891 38931340 + Slc9a4 protein_coding retained_intron MGP_WSBEiJ_T0011950.1 MGP_WSBEiJ_G0010080.1 mouse_genomes_project 1 110825806 110825993 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020402.1 MGP_WSBEiJ_G0015663.1 mouse_genomes_project 1 86668740 86670374 + MGP_WSBEiJ_P0020402 1700019O17Rik protein_coding protein_coding MGP_WSBEiJ_T0005915.1 MGP_WSBEiJ_G0004956.1 mouse_genomes_project 1 185001283 185007804 + Gm17275 lincRNA lincRNA MGP_WSBEiJ_T0005616.1 MGP_WSBEiJ_G0004722.1 mouse_genomes_project 1 40676417 40676880 - Gm29664 lincRNA lincRNA MGP_WSBEiJ_T0000626.1 MGP_WSBEiJ_G0000569.1 mouse_genomes_project 1 140974168 140976572 - TEC TEC MGP_WSBEiJ_T0023474.1 MGP_WSBEiJ_G0016336.1 mouse_genomes_project 1 194438136 194481441 - MGP_WSBEiJ_P0023474 Smyd2 protein_coding protein_coding MGP_WSBEiJ_T0023475.1 MGP_WSBEiJ_G0016336.1 mouse_genomes_project 1 194438138 194446656 - Smyd2 protein_coding processed_transcript MGP_WSBEiJ_T0023476.1 MGP_WSBEiJ_G0016336.1 mouse_genomes_project 1 194438286 194440017 - Smyd2 protein_coding retained_intron MGP_WSBEiJ_T0023477.1 MGP_WSBEiJ_G0016336.1 mouse_genomes_project 1 194442716 194481331 - Smyd2 protein_coding retained_intron MGP_WSBEiJ_T0009348.1 MGP_WSBEiJ_G0007505.1 mouse_genomes_project 1 62571821 62571959 - Gm24513 miRNA miRNA MGP_WSBEiJ_T0021973.1 MGP_WSBEiJ_G0016002.1 mouse_genomes_project 1 155907293 156079618 + MGP_WSBEiJ_P0021973 Nmnat2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021974.1 MGP_WSBEiJ_G0016002.1 mouse_genomes_project 1 155907298 156079715 + MGP_WSBEiJ_P0021974 Nmnat2 protein_coding protein_coding MGP_WSBEiJ_T0021975.1 MGP_WSBEiJ_G0016002.1 mouse_genomes_project 1 155907341 156051338 + MGP_WSBEiJ_P0021975 Nmnat2 protein_coding protein_coding MGP_WSBEiJ_T0021976.1 MGP_WSBEiJ_G0016002.1 mouse_genomes_project 1 155907574 156039716 + Nmnat2 protein_coding processed_transcript MGP_WSBEiJ_T0021977.1 MGP_WSBEiJ_G0016002.1 mouse_genomes_project 1 155989461 156037037 + Nmnat2 protein_coding retained_intron MGP_WSBEiJ_T0021978.1 MGP_WSBEiJ_G0016002.1 mouse_genomes_project 1 156050731 156051847 + Nmnat2 protein_coding processed_transcript MGP_WSBEiJ_T0000716.1 MGP_WSBEiJ_G0000659.1 mouse_genomes_project 1 180150660 180153096 + TEC TEC MGP_WSBEiJ_T0005761.1 MGP_WSBEiJ_G0004832.1 mouse_genomes_project 1 96841812 96874434 - 1700063A18Rik lincRNA lincRNA MGP_WSBEiJ_T0002779.1 MGP_WSBEiJ_G0002635.1 mouse_genomes_project 1 86532277 86533143 - Gm28626 antisense antisense MGP_WSBEiJ_T0012085.1 MGP_WSBEiJ_G0010215.1 mouse_genomes_project 1 170249384 170250980 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021275.1 MGP_WSBEiJ_G0015855.1 mouse_genomes_project 1 132857781 132863160 - MGP_WSBEiJ_P0021275 Il24 protein_coding protein_coding MGP_WSBEiJ_T0021276.1 MGP_WSBEiJ_G0015855.1 mouse_genomes_project 1 132857781 132861706 - MGP_WSBEiJ_P0021276 Il24 protein_coding protein_coding MGP_WSBEiJ_T0021277.1 MGP_WSBEiJ_G0015855.1 mouse_genomes_project 1 132858162 132863045 - MGP_WSBEiJ_P0021277 Il24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021278.1 MGP_WSBEiJ_G0015855.1 mouse_genomes_project 1 132860496 132863119 - MGP_WSBEiJ_P0021278 Il24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002793.1 MGP_WSBEiJ_G0002649.1 mouse_genomes_project 1 94519263 94539499 + Gm10550 antisense antisense MGP_WSBEiJ_T0022378.1 MGP_WSBEiJ_G0016072.1 mouse_genomes_project 1 166200079 166224874 - MGP_WSBEiJ_P0022378 Fmo4 protein_coding protein_coding MGP_WSBEiJ_T0022379.1 MGP_WSBEiJ_G0016072.1 mouse_genomes_project 1 166200774 166223750 - MGP_WSBEiJ_P0022379 Fmo4 protein_coding protein_coding MGP_WSBEiJ_T0022380.1 MGP_WSBEiJ_G0016072.1 mouse_genomes_project 1 166209276 166224874 - Fmo4 protein_coding retained_intron MGP_WSBEiJ_T0022381.1 MGP_WSBEiJ_G0016072.1 mouse_genomes_project 1 166210033 166214898 - Fmo4 protein_coding retained_intron MGP_WSBEiJ_T0022382.1 MGP_WSBEiJ_G0016072.1 mouse_genomes_project 1 166213937 166225129 - MGP_WSBEiJ_P0022382 Fmo4 protein_coding protein_coding MGP_WSBEiJ_T0022383.1 MGP_WSBEiJ_G0016072.1 mouse_genomes_project 1 166214708 166225175 - MGP_WSBEiJ_P0022383 Fmo4 protein_coding protein_coding MGP_WSBEiJ_T0005591.1 MGP_WSBEiJ_G0004703.1 mouse_genomes_project 1 32285395 32286270 - Gm37958 lincRNA lincRNA MGP_WSBEiJ_T0098737.1 MGP_WSBEiJ_G0037400.1 mouse_genomes_project 1 18191594 18191727 - Gm24723 snoRNA snoRNA MGP_WSBEiJ_T0000471.1 MGP_WSBEiJ_G0000416.1 mouse_genomes_project 1 66182049 66185147 - TEC TEC MGP_WSBEiJ_T0005581.1 MGP_WSBEiJ_G0004694.1 mouse_genomes_project 1 20751230 20751580 + Gm29107 lincRNA lincRNA MGP_WSBEiJ_T0000333.1 MGP_WSBEiJ_G0000281.1 mouse_genomes_project 1 2457892 2459924 + TEC TEC MGP_WSBEiJ_T0018569.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31846567 32261546 + MGP_WSBEiJ_P0018569 Dst protein_coding protein_coding MGP_WSBEiJ_T0018570.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31846614 32187994 + MGP_WSBEiJ_P0018570 Dst protein_coding unknown_likely_coding MGP_WSBEiJ_T0018571.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31949979 32127431 + MGP_WSBEiJ_P0018571 Dst protein_coding protein_coding MGP_WSBEiJ_T0018572.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31949981 32087743 + MGP_WSBEiJ_P0018572 Dst protein_coding protein_coding MGP_WSBEiJ_T0018573.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31950225 32087744 + MGP_WSBEiJ_P0018573 Dst protein_coding protein_coding MGP_WSBEiJ_T0018574.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31950279 32115283 + Dst protein_coding retained_intron MGP_WSBEiJ_T0018575.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31955918 32262596 + MGP_WSBEiJ_P0018575 Dst protein_coding protein_coding MGP_WSBEiJ_T0018576.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31955930 32262605 + MGP_WSBEiJ_P0018576 Dst protein_coding protein_coding MGP_WSBEiJ_T0018577.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 31955930 32262594 + MGP_WSBEiJ_P0018577 Dst protein_coding protein_coding MGP_WSBEiJ_T0018578.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32037611 32068763 + Dst protein_coding retained_intron MGP_WSBEiJ_T0018579.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32072073 32105071 + Dst protein_coding processed_transcript MGP_WSBEiJ_T0018580.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32110901 32262348 + MGP_WSBEiJ_P0018580 Dst protein_coding protein_coding MGP_WSBEiJ_T0018581.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32110901 32145892 + MGP_WSBEiJ_P0018581 Dst protein_coding protein_coding MGP_WSBEiJ_T0018582.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32110901 32136539 + MGP_WSBEiJ_P0018582 Dst protein_coding protein_coding MGP_WSBEiJ_T0018583.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32112489 32115984 + Dst protein_coding retained_intron MGP_WSBEiJ_T0018584.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32131543 32135883 + Dst protein_coding retained_intron MGP_WSBEiJ_T0018585.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32190915 32262603 + MGP_WSBEiJ_P0018585 Dst protein_coding unknown_likely_coding MGP_WSBEiJ_T0018586.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32211118 32262348 + MGP_WSBEiJ_P0018586 Dst protein_coding protein_coding MGP_WSBEiJ_T0018587.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32223851 32225574 + Dst protein_coding retained_intron MGP_WSBEiJ_T0018588.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32247393 32257423 + MGP_WSBEiJ_P0018588 Dst protein_coding protein_coding MGP_WSBEiJ_T0018589.1 MGP_WSBEiJ_G0015320.1 mouse_genomes_project 1 32248384 32260611 + MGP_WSBEiJ_P0018589 Dst protein_coding protein_coding MGP_WSBEiJ_T0023553.1 MGP_WSBEiJ_G0016353.1 mouse_genomes_project 1 196388369 196389930 + MGP_WSBEiJ_P0023553 Lpgat1 protein_coding protein_coding MGP_WSBEiJ_T0023554.1 MGP_WSBEiJ_G0016353.1 mouse_genomes_project 1 196388369 196471624 + MGP_WSBEiJ_P0023554 Lpgat1 protein_coding protein_coding MGP_WSBEiJ_T0023555.1 MGP_WSBEiJ_G0016353.1 mouse_genomes_project 1 196388562 196390318 + Lpgat1 protein_coding retained_intron MGP_WSBEiJ_T0023556.1 MGP_WSBEiJ_G0016353.1 mouse_genomes_project 1 196388924 196467340 + MGP_WSBEiJ_P0023556 Lpgat1 protein_coding protein_coding MGP_WSBEiJ_T0023557.1 MGP_WSBEiJ_G0016353.1 mouse_genomes_project 1 196389056 196440882 + MGP_WSBEiJ_P0023557 Lpgat1 protein_coding protein_coding MGP_WSBEiJ_T0011678.1 MGP_WSBEiJ_G0009808.1 mouse_genomes_project 1 7691679 7693145 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000581.1 MGP_WSBEiJ_G0000526.1 mouse_genomes_project 1 129184103 129184646 + TEC TEC MGP_WSBEiJ_T0005845.1 MGP_WSBEiJ_G0004899.1 mouse_genomes_project 1 151930405 151951620 + Gm29020 lincRNA lincRNA MGP_WSBEiJ_T0022403.1 MGP_WSBEiJ_G0016078.1 mouse_genomes_project 1 166651825 166723398 - MGP_WSBEiJ_P0022403 Prrx1 protein_coding protein_coding MGP_WSBEiJ_T0022404.1 MGP_WSBEiJ_G0016078.1 mouse_genomes_project 1 166651825 166723360 - MGP_WSBEiJ_P0022404 Prrx1 protein_coding protein_coding MGP_WSBEiJ_T0022405.1 MGP_WSBEiJ_G0016078.1 mouse_genomes_project 1 166655027 166698189 - Prrx1 protein_coding processed_transcript MGP_WSBEiJ_T0022406.1 MGP_WSBEiJ_G0016078.1 mouse_genomes_project 1 166660300 166723356 - MGP_WSBEiJ_P0022406 Prrx1 protein_coding protein_coding MGP_WSBEiJ_T0022407.1 MGP_WSBEiJ_G0016078.1 mouse_genomes_project 1 166691780 166723359 - Prrx1 protein_coding retained_intron MGP_WSBEiJ_T0012072.1 MGP_WSBEiJ_G0010202.1 mouse_genomes_project 1 165133286 165134876 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019360.1 MGP_WSBEiJ_G0015470.1 mouse_genomes_project 1 57604474 57615456 + MGP_WSBEiJ_P0019360 Ndufb3 protein_coding protein_coding MGP_WSBEiJ_T0005813.1 MGP_WSBEiJ_G0004872.1 mouse_genomes_project 1 132733305 132756433 + Gm28856 lincRNA lincRNA MGP_WSBEiJ_T0000389.1 MGP_WSBEiJ_G0000335.1 mouse_genomes_project 1 23266954 23270535 - TEC TEC MGP_WSBEiJ_T0096883.1 MGP_WSBEiJ_G0035564.1 mouse_genomes_project 1 105986987 105987099 - n-R5s216 rRNA rRNA MGP_WSBEiJ_T0000323.1 MGP_WSBEiJ_G0000271.1 mouse_genomes_project 1 397794 400027 - TEC TEC MGP_WSBEiJ_T0019925.1 MGP_WSBEiJ_G0015575.1 mouse_genomes_project 1 74588113 74607162 + MGP_WSBEiJ_P0019925 Cyp27a1 protein_coding protein_coding MGP_WSBEiJ_T0019926.1 MGP_WSBEiJ_G0015575.1 mouse_genomes_project 1 74604620 74605986 + Cyp27a1 protein_coding retained_intron MGP_WSBEiJ_T0019927.1 MGP_WSBEiJ_G0015575.1 mouse_genomes_project 1 74606078 74607093 + Cyp27a1 protein_coding retained_intron MGP_WSBEiJ_T0022576.1 MGP_WSBEiJ_G0016117.1 mouse_genomes_project 1 170474490 170566715 + MGP_WSBEiJ_P0022576 Fam78b protein_coding protein_coding MGP_WSBEiJ_T0022577.1 MGP_WSBEiJ_G0016117.1 mouse_genomes_project 1 170474490 170566715 + MGP_WSBEiJ_P0022577 Fam78b protein_coding protein_coding MGP_WSBEiJ_T0022578.1 MGP_WSBEiJ_G0016117.1 mouse_genomes_project 1 170474505 170564497 + MGP_WSBEiJ_P0022578 Fam78b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022579.1 MGP_WSBEiJ_G0016117.1 mouse_genomes_project 1 170474539 170556556 + MGP_WSBEiJ_P0022579 Fam78b protein_coding protein_coding MGP_WSBEiJ_T0022580.1 MGP_WSBEiJ_G0016117.1 mouse_genomes_project 1 170474653 170564144 + MGP_WSBEiJ_P0022580 Fam78b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022581.1 MGP_WSBEiJ_G0016117.1 mouse_genomes_project 1 170474662 170566422 + MGP_WSBEiJ_P0022581 Fam78b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000408.1 MGP_WSBEiJ_G0000353.1 mouse_genomes_project 1 31592723 31595037 - TEC TEC MGP_WSBEiJ_T0019307.1 MGP_WSBEiJ_G0015462.1 mouse_genomes_project 1 57201288 57263226 + MGP_WSBEiJ_P0019307 Aox4 protein_coding protein_coding MGP_WSBEiJ_T0019308.1 MGP_WSBEiJ_G0015462.1 mouse_genomes_project 1 57201323 57254945 + Aox4 protein_coding processed_transcript MGP_WSBEiJ_T0019309.1 MGP_WSBEiJ_G0015462.1 mouse_genomes_project 1 57201342 57206231 + Aox4 protein_coding processed_transcript MGP_WSBEiJ_T0019310.1 MGP_WSBEiJ_G0015462.1 mouse_genomes_project 1 57202109 57204264 + Aox4 protein_coding retained_intron MGP_WSBEiJ_T0019311.1 MGP_WSBEiJ_G0015462.1 mouse_genomes_project 1 57232287 57237761 + Aox4 protein_coding retained_intron MGP_WSBEiJ_T0011957.1 MGP_WSBEiJ_G0010087.1 mouse_genomes_project 1 113368619 113371749 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009404.1 MGP_WSBEiJ_G0007561.1 mouse_genomes_project 1 172574440 172574560 - Mir6354 miRNA miRNA MGP_WSBEiJ_T0016455.1 MGP_WSBEiJ_G0014536.1 mouse_genomes_project 1 162911495 162985737 + Gm10530 processed_transcript sense_intronic MGP_WSBEiJ_T0016456.1 MGP_WSBEiJ_G0014536.1 mouse_genomes_project 1 162982522 162985737 + Gm10530 processed_transcript lincRNA MGP_WSBEiJ_T0020873.1 MGP_WSBEiJ_G0015769.1 mouse_genomes_project 1 97938939 98014060 - MGP_WSBEiJ_P0020873 Slco6c1 protein_coding protein_coding MGP_WSBEiJ_T0020874.1 MGP_WSBEiJ_G0015769.1 mouse_genomes_project 1 97939415 98014155 - MGP_WSBEiJ_P0020874 Slco6c1 protein_coding protein_coding MGP_WSBEiJ_T0011982.1 MGP_WSBEiJ_G0010112.1 mouse_genomes_project 1 122320508 122320718 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097520.1 MGP_WSBEiJ_G0036183.1 mouse_genomes_project 1 7158340 7158444 - Gm24674 snRNA snRNA MGP_WSBEiJ_T0020431.1 MGP_WSBEiJ_G0015672.1 mouse_genomes_project 1 87456756 87465619 - MGP_WSBEiJ_P0020431 Ecel1 protein_coding protein_coding MGP_WSBEiJ_T0020432.1 MGP_WSBEiJ_G0015672.1 mouse_genomes_project 1 87456759 87464125 - MGP_WSBEiJ_P0020432 Ecel1 protein_coding protein_coding MGP_WSBEiJ_T0020433.1 MGP_WSBEiJ_G0015672.1 mouse_genomes_project 1 87456763 87465263 - MGP_WSBEiJ_P0020433 Ecel1 protein_coding protein_coding MGP_WSBEiJ_T0020434.1 MGP_WSBEiJ_G0015672.1 mouse_genomes_project 1 87456983 87458018 - Ecel1 protein_coding retained_intron MGP_WSBEiJ_T0020435.1 MGP_WSBEiJ_G0015672.1 mouse_genomes_project 1 87464120 87464409 - Ecel1 protein_coding processed_transcript MGP_WSBEiJ_T0012066.1 MGP_WSBEiJ_G0010196.1 mouse_genomes_project 1 162429104 162429587 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000464.1 MGP_WSBEiJ_G0000409.1 mouse_genomes_project 1 60927949 60929299 + TEC TEC MGP_WSBEiJ_T0012024.1 MGP_WSBEiJ_G0010154.1 mouse_genomes_project 1 145008001 145008616 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021601.1 MGP_WSBEiJ_G0015930.1 mouse_genomes_project 1 137411671 137419808 - MGP_WSBEiJ_P0021601 Gpr37l1 protein_coding protein_coding MGP_WSBEiJ_T0097534.1 MGP_WSBEiJ_G0036197.1 mouse_genomes_project 1 44188950 44189057 - Gm23216 snRNA snRNA MGP_WSBEiJ_T0023659.1 MGP_WSBEiJ_G0016371.1 mouse_genomes_project 1 199354094 199357790 + Plxna2 protein_coding retained_intron MGP_WSBEiJ_T0023660.1 MGP_WSBEiJ_G0016371.1 mouse_genomes_project 1 199356747 199556396 + MGP_WSBEiJ_P0023660 Plxna2 protein_coding protein_coding MGP_WSBEiJ_T0023661.1 MGP_WSBEiJ_G0016371.1 mouse_genomes_project 1 199381799 199394063 + Plxna2 protein_coding processed_transcript MGP_WSBEiJ_T0023662.1 MGP_WSBEiJ_G0016371.1 mouse_genomes_project 1 199502775 199526277 + MGP_WSBEiJ_P0023662 Plxna2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023663.1 MGP_WSBEiJ_G0016371.1 mouse_genomes_project 1 199544358 199553754 + Plxna2 protein_coding retained_intron MGP_WSBEiJ_T0021453.1 MGP_WSBEiJ_G0015894.1 mouse_genomes_project 1 135403004 135423635 + MGP_WSBEiJ_P0021453 protein_coding protein_coding MGP_WSBEiJ_T0021454.1 MGP_WSBEiJ_G0015894.1 mouse_genomes_project 1 135403004 135423669 + MGP_WSBEiJ_P0021454 protein_coding protein_coding MGP_WSBEiJ_T0021459.1 MGP_WSBEiJ_G0015894.1 mouse_genomes_project 1 135417943 135423669 + MGP_WSBEiJ_P0021459 protein_coding protein_coding MGP_WSBEiJ_T0016388.1 MGP_WSBEiJ_G0014510.1 mouse_genomes_project 1 34622947 34624910 + D430040D24Rik processed_transcript retained_intron MGP_WSBEiJ_T0016389.1 MGP_WSBEiJ_G0014510.1 mouse_genomes_project 1 34623605 34630872 + D430040D24Rik processed_transcript antisense MGP_WSBEiJ_T0020453.1 MGP_WSBEiJ_G0015677.1 mouse_genomes_project 1 87585806 87635067 + MGP_WSBEiJ_P0020453 Efhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020454.1 MGP_WSBEiJ_G0015677.1 mouse_genomes_project 1 87585806 87635070 + MGP_WSBEiJ_P0020454 Efhd1 protein_coding protein_coding MGP_WSBEiJ_T0020455.1 MGP_WSBEiJ_G0015677.1 mouse_genomes_project 1 87633456 87633973 + Efhd1 protein_coding processed_transcript MGP_WSBEiJ_T0020327.1 MGP_WSBEiJ_G0015647.1 mouse_genomes_project 1 85852848 85877983 + MGP_WSBEiJ_P0020327 Sp100 protein_coding protein_coding MGP_WSBEiJ_T0020328.1 MGP_WSBEiJ_G0015647.1 mouse_genomes_project 1 85852848 85904918 + MGP_WSBEiJ_P0020328 Sp100 protein_coding protein_coding MGP_WSBEiJ_T0020330.1 MGP_WSBEiJ_G0015647.1 mouse_genomes_project 1 85854943 85891324 + MGP_WSBEiJ_P0020330 Sp100 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020331.1 MGP_WSBEiJ_G0015647.1 mouse_genomes_project 1 85866807 85877553 + Sp100 protein_coding processed_transcript MGP_WSBEiJ_T0020332.1 MGP_WSBEiJ_G0015647.1 mouse_genomes_project 1 85868699 85874163 + Sp100 protein_coding retained_intron MGP_WSBEiJ_T0020333.1 MGP_WSBEiJ_G0015647.1 mouse_genomes_project 1 85888894 85894625 + Sp100 protein_coding retained_intron MGP_WSBEiJ_T0020334.1 MGP_WSBEiJ_G0015647.1 mouse_genomes_project 1 85889252 85904350 + MGP_WSBEiJ_P0020334 Sp100 protein_coding protein_coding MGP_WSBEiJ_T0020335.1 MGP_WSBEiJ_G0015647.1 mouse_genomes_project 1 85898379 85902939 + MGP_WSBEiJ_P0020335 Sp100 protein_coding protein_coding MGP_WSBEiJ_T0022097.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159131763 159162968 - MGP_WSBEiJ_P0022097 Tor1aip1 protein_coding protein_coding MGP_WSBEiJ_T0022098.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159131778 159164576 - MGP_WSBEiJ_P0022098 Tor1aip1 protein_coding protein_coding MGP_WSBEiJ_T0022099.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159134035 159164629 - MGP_WSBEiJ_P0022099 Tor1aip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022100.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159134581 159164629 - MGP_WSBEiJ_P0022100 Tor1aip1 protein_coding protein_coding MGP_WSBEiJ_T0022101.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159135331 159161084 - MGP_WSBEiJ_P0022101 Tor1aip1 protein_coding protein_coding MGP_WSBEiJ_T0022102.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159135372 159163031 - MGP_WSBEiJ_P0022102 Tor1aip1 protein_coding protein_coding MGP_WSBEiJ_T0022103.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159135372 159164629 - MGP_WSBEiJ_P0022103 Tor1aip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022104.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159145137 159146452 - Tor1aip1 protein_coding retained_intron MGP_WSBEiJ_T0022105.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159150152 159164199 - MGP_WSBEiJ_P0022105 Tor1aip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022106.1 MGP_WSBEiJ_G0016026.1 mouse_genomes_project 1 159157956 159164296 - Tor1aip1 protein_coding retained_intron MGP_WSBEiJ_T0021542.1 MGP_WSBEiJ_G0015917.1 mouse_genomes_project 1 136578646 136583696 + MGP_WSBEiJ_P0021542 4933406M09Rik protein_coding protein_coding MGP_WSBEiJ_T0002908.1 MGP_WSBEiJ_G0002737.1 mouse_genomes_project 1 191385713 191388779 - Gm37912 antisense antisense MGP_WSBEiJ_T0005815.1 MGP_WSBEiJ_G0004874.1 mouse_genomes_project 1 134232872 134235665 - 1700037F24Rik lincRNA lincRNA MGP_WSBEiJ_T0000690.1 MGP_WSBEiJ_G0000633.1 mouse_genomes_project 1 164361190 164363185 - TEC TEC MGP_WSBEiJ_T0005911.1 MGP_WSBEiJ_G0004953.1 mouse_genomes_project 1 184372624 184382592 - Gm37336 lincRNA lincRNA MGP_WSBEiJ_T0005912.1 MGP_WSBEiJ_G0004953.1 mouse_genomes_project 1 184382189 184382657 - Gm37336 lincRNA lincRNA MGP_WSBEiJ_T0019675.1 MGP_WSBEiJ_G0015528.1 mouse_genomes_project 1 65887199 66115381 + MGP_WSBEiJ_P0019675 Unc80 protein_coding protein_coding MGP_WSBEiJ_T0019676.1 MGP_WSBEiJ_G0015528.1 mouse_genomes_project 1 65887246 65929741 + MGP_WSBEiJ_P0019676 Unc80 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019677.1 MGP_WSBEiJ_G0015528.1 mouse_genomes_project 1 65887262 65906581 + Unc80 protein_coding retained_intron MGP_WSBEiJ_T0019678.1 MGP_WSBEiJ_G0015528.1 mouse_genomes_project 1 65887279 66114724 + MGP_WSBEiJ_P0019678 Unc80 protein_coding unknown_likely_coding MGP_WSBEiJ_T0019679.1 MGP_WSBEiJ_G0015528.1 mouse_genomes_project 1 66089702 66090280 + Unc80 protein_coding retained_intron MGP_WSBEiJ_T0019680.1 MGP_WSBEiJ_G0015528.1 mouse_genomes_project 1 66095629 66112219 + MGP_WSBEiJ_P0019680 Unc80 protein_coding protein_coding MGP_WSBEiJ_T0000512.1 MGP_WSBEiJ_G0000457.1 mouse_genomes_project 1 84301219 84302851 - TEC TEC MGP_WSBEiJ_T0100343.1 MGP_WSBEiJ_G0038826.1 mouse_genomes_project 1 63240086 63258845 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0005736.1 MGP_WSBEiJ_G0004809.1 mouse_genomes_project 1 89256420 89257267 + Platr5 lincRNA lincRNA MGP_WSBEiJ_T0005737.1 MGP_WSBEiJ_G0004809.1 mouse_genomes_project 1 89256484 89257240 + Platr5 lincRNA lincRNA MGP_WSBEiJ_T0005807.1 MGP_WSBEiJ_G0004867.1 mouse_genomes_project 1 126871370 126879498 - 1700121L03Rik lincRNA lincRNA MGP_WSBEiJ_T0097539.1 MGP_WSBEiJ_G0036202.1 mouse_genomes_project 1 57476441 57476548 - Gm23966 snRNA snRNA MGP_WSBEiJ_T0023638.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 197892506 197894622 + Lamb3 protein_coding retained_intron MGP_WSBEiJ_T0023639.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 197892532 198039883 + MGP_WSBEiJ_P0023639 Lamb3 protein_coding protein_coding MGP_WSBEiJ_T0023640.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 197892539 198021957 + MGP_WSBEiJ_P0023640 Lamb3 protein_coding protein_coding MGP_WSBEiJ_T0023641.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 197892557 197950357 + Lamb3 protein_coding processed_transcript MGP_WSBEiJ_T0023650.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 197968031 197975271 + Lamb3 protein_coding processed_transcript MGP_WSBEiJ_T0023651.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 197997984 198039883 + MGP_WSBEiJ_P0023651 Lamb3 protein_coding protein_coding MGP_WSBEiJ_T0023652.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 197998212 197999407 + Lamb3 protein_coding processed_transcript MGP_WSBEiJ_T0023653.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 197998234 198039880 + MGP_WSBEiJ_P0023653 Lamb3 protein_coding protein_coding MGP_WSBEiJ_T0023654.1 MGP_WSBEiJ_G0016367.1 mouse_genomes_project 1 198016657 198021956 + Lamb3 protein_coding processed_transcript MGP_WSBEiJ_T0023191.1 MGP_WSBEiJ_G0016276.1 mouse_genomes_project 1 184762377 184774137 + MGP_WSBEiJ_P0023191 Parp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023192.1 MGP_WSBEiJ_G0016276.1 mouse_genomes_project 1 184762382 184796193 + MGP_WSBEiJ_P0023192 Parp1 protein_coding protein_coding MGP_WSBEiJ_T0023193.1 MGP_WSBEiJ_G0016276.1 mouse_genomes_project 1 184762679 184772600 + MGP_WSBEiJ_P0023193 Parp1 protein_coding protein_coding MGP_WSBEiJ_T0023194.1 MGP_WSBEiJ_G0016276.1 mouse_genomes_project 1 184784438 184786622 + Parp1 protein_coding retained_intron MGP_WSBEiJ_T0023195.1 MGP_WSBEiJ_G0016276.1 mouse_genomes_project 1 184786254 184788278 + Parp1 protein_coding retained_intron MGP_WSBEiJ_T0023196.1 MGP_WSBEiJ_G0016276.1 mouse_genomes_project 1 184793163 184795135 + Parp1 protein_coding retained_intron MGP_WSBEiJ_T0023197.1 MGP_WSBEiJ_G0016276.1 mouse_genomes_project 1 184793774 184795045 + Parp1 protein_coding retained_intron MGP_WSBEiJ_T0023198.1 MGP_WSBEiJ_G0016276.1 mouse_genomes_project 1 184793926 184796191 + MGP_WSBEiJ_P0023198 Parp1 protein_coding protein_coding MGP_WSBEiJ_T0000780.1 MGP_WSBEiJ_G0000720.1 mouse_genomes_project 1 199816829 199819723 - TEC TEC MGP_WSBEiJ_T0021399.1 MGP_WSBEiJ_G0015884.1 mouse_genomes_project 1 134528310 134556764 + MGP_WSBEiJ_P0021399 Rbbp5 protein_coding protein_coding MGP_WSBEiJ_T0021400.1 MGP_WSBEiJ_G0015884.1 mouse_genomes_project 1 134528380 134557933 + MGP_WSBEiJ_P0021400 Rbbp5 protein_coding protein_coding MGP_WSBEiJ_T0021401.1 MGP_WSBEiJ_G0015884.1 mouse_genomes_project 1 134528436 134541450 + MGP_WSBEiJ_P0021401 Rbbp5 protein_coding protein_coding MGP_WSBEiJ_T0021402.1 MGP_WSBEiJ_G0015884.1 mouse_genomes_project 1 134528454 134556066 + MGP_WSBEiJ_P0021402 Rbbp5 protein_coding protein_coding MGP_WSBEiJ_T0021403.1 MGP_WSBEiJ_G0015884.1 mouse_genomes_project 1 134528587 134541534 + MGP_WSBEiJ_P0021403 Rbbp5 protein_coding protein_coding MGP_WSBEiJ_T0021404.1 MGP_WSBEiJ_G0015884.1 mouse_genomes_project 1 134556006 134557929 + Rbbp5 protein_coding retained_intron MGP_WSBEiJ_T0009406.1 MGP_WSBEiJ_G0007563.1 mouse_genomes_project 1 177451281 177451353 - Gm44339 miRNA miRNA MGP_WSBEiJ_T0018690.1 MGP_WSBEiJ_G0015341.1 mouse_genomes_project 1 34603849 34612439 - MGP_WSBEiJ_P0018690 Ankrd39 protein_coding protein_coding MGP_WSBEiJ_T0011676.1 MGP_WSBEiJ_G0009806.1 mouse_genomes_project 1 6604865 6607050 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022705.1 MGP_WSBEiJ_G0016153.1 mouse_genomes_project 1 174871856 174878356 - MGP_WSBEiJ_P0022705 Tomm40l protein_coding protein_coding MGP_WSBEiJ_T0022706.1 MGP_WSBEiJ_G0016153.1 mouse_genomes_project 1 174873648 174878290 - MGP_WSBEiJ_P0022706 Tomm40l protein_coding protein_coding MGP_WSBEiJ_T0022707.1 MGP_WSBEiJ_G0016153.1 mouse_genomes_project 1 174873648 174878026 - MGP_WSBEiJ_P0022707 Tomm40l protein_coding protein_coding MGP_WSBEiJ_T0022708.1 MGP_WSBEiJ_G0016153.1 mouse_genomes_project 1 174874209 174878293 - MGP_WSBEiJ_P0022708 Tomm40l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022709.1 MGP_WSBEiJ_G0016153.1 mouse_genomes_project 1 174876666 174878302 - MGP_WSBEiJ_P0022709 Tomm40l protein_coding protein_coding MGP_WSBEiJ_T0022710.1 MGP_WSBEiJ_G0016153.1 mouse_genomes_project 1 174876737 174878286 - MGP_WSBEiJ_P0022710 Tomm40l protein_coding protein_coding MGP_WSBEiJ_T0022711.1 MGP_WSBEiJ_G0016153.1 mouse_genomes_project 1 174876926 174878274 - Tomm40l protein_coding processed_transcript MGP_WSBEiJ_T0022712.1 MGP_WSBEiJ_G0016153.1 mouse_genomes_project 1 174877019 174878338 - Tomm40l protein_coding retained_intron MGP_WSBEiJ_T0022421.1 MGP_WSBEiJ_G0016083.1 mouse_genomes_project 1 167371606 167425964 - MGP_WSBEiJ_P0022421 BC055324 protein_coding protein_coding MGP_WSBEiJ_T0022423.1 MGP_WSBEiJ_G0016083.1 mouse_genomes_project 1 167384214 167425964 - MGP_WSBEiJ_P0022423 BC055324 protein_coding protein_coding MGP_WSBEiJ_T0022424.1 MGP_WSBEiJ_G0016083.1 mouse_genomes_project 1 167384735 167392386 - MGP_WSBEiJ_P0022424 BC055324 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022425.1 MGP_WSBEiJ_G0016083.1 mouse_genomes_project 1 167398118 167403329 - BC055324 protein_coding retained_intron MGP_WSBEiJ_T0022426.1 MGP_WSBEiJ_G0016083.1 mouse_genomes_project 1 167417943 167425932 - MGP_WSBEiJ_P0022426 BC055324 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022427.1 MGP_WSBEiJ_G0016083.1 mouse_genomes_project 1 167420803 167425709 - BC055324 protein_coding processed_transcript MGP_WSBEiJ_T0012002.1 MGP_WSBEiJ_G0010132.1 mouse_genomes_project 1 132097130 132097539 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023100.1 MGP_WSBEiJ_G0016261.1 mouse_genomes_project 1 182493796 182528124 + Efcab2 protein_coding processed_transcript MGP_WSBEiJ_T0023101.1 MGP_WSBEiJ_G0016261.1 mouse_genomes_project 1 182493814 182576826 + MGP_WSBEiJ_P0023101 Efcab2 protein_coding protein_coding MGP_WSBEiJ_T0023102.1 MGP_WSBEiJ_G0016261.1 mouse_genomes_project 1 182537879 182573790 + Efcab2 protein_coding processed_transcript MGP_WSBEiJ_T0011831.1 MGP_WSBEiJ_G0009961.1 mouse_genomes_project 1 59104988 59107051 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002755.1 MGP_WSBEiJ_G0002619.1 mouse_genomes_project 1 63410917 63423018 + Gm13748 antisense antisense MGP_WSBEiJ_T0021298.1 MGP_WSBEiJ_G0015862.1 mouse_genomes_project 1 133180517 133253146 - MGP_WSBEiJ_P0021298 Rassf5 protein_coding protein_coding MGP_WSBEiJ_T0021299.1 MGP_WSBEiJ_G0015862.1 mouse_genomes_project 1 133181884 133205232 - MGP_WSBEiJ_P0021299 Rassf5 protein_coding protein_coding MGP_WSBEiJ_T0021300.1 MGP_WSBEiJ_G0015862.1 mouse_genomes_project 1 133212816 133253274 - Rassf5 protein_coding processed_transcript MGP_WSBEiJ_T0020622.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91916446 91944302 + Ube2f protein_coding retained_intron MGP_WSBEiJ_T0020623.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91916453 91958452 + MGP_WSBEiJ_P0020623 Ube2f protein_coding protein_coding MGP_WSBEiJ_T0020624.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91916461 91958737 + MGP_WSBEiJ_P0020624 Ube2f protein_coding protein_coding MGP_WSBEiJ_T0020625.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91916479 91963052 + MGP_WSBEiJ_P0020625 Ube2f protein_coding protein_coding MGP_WSBEiJ_T0020626.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91916507 91958485 + MGP_WSBEiJ_P0020626 Ube2f protein_coding protein_coding MGP_WSBEiJ_T0020627.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91916708 91958639 + MGP_WSBEiJ_P0020627 Ube2f protein_coding protein_coding MGP_WSBEiJ_T0020628.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91916798 91934410 + MGP_WSBEiJ_P0020628 Ube2f protein_coding protein_coding MGP_WSBEiJ_T0020629.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91933759 91945267 + Ube2f protein_coding retained_intron MGP_WSBEiJ_T0020630.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91943765 91945375 + Ube2f protein_coding retained_intron MGP_WSBEiJ_T0020631.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91944933 91958103 + Ube2f protein_coding retained_intron MGP_WSBEiJ_T0020632.1 MGP_WSBEiJ_G0015712.1 mouse_genomes_project 1 91956359 91957728 + Ube2f protein_coding retained_intron MGP_WSBEiJ_T0005843.1 MGP_WSBEiJ_G0004897.1 mouse_genomes_project 1 141830249 141857779 + 4933436E23Rik lincRNA lincRNA MGP_WSBEiJ_T0002853.1 MGP_WSBEiJ_G0002693.1 mouse_genomes_project 1 161714746 161788485 - Gm37679 antisense antisense MGP_WSBEiJ_T0005797.1 MGP_WSBEiJ_G0004860.1 mouse_genomes_project 1 122344851 122354213 - Gm29348 lincRNA lincRNA MGP_WSBEiJ_T0098753.1 MGP_WSBEiJ_G0037416.1 mouse_genomes_project 1 56398370 56398500 - Gm22371 snoRNA snoRNA MGP_WSBEiJ_T0011055.1 MGP_WSBEiJ_G0009212.1 mouse_genomes_project 1 69539051 69539326 - Gm22665 misc_RNA misc_RNA MGP_WSBEiJ_T0011889.1 MGP_WSBEiJ_G0010019.1 mouse_genomes_project 1 81616914 81621083 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097488.1 MGP_WSBEiJ_G0036155.1 mouse_genomes_project 1 106495487 106521628 - sense_overlapping sense_overlapping MGP_WSBEiJ_T0020161.1 MGP_WSBEiJ_G0015612.1 mouse_genomes_project 1 78251244 78368867 + MGP_WSBEiJ_P0020161 Sgpp2 protein_coding protein_coding MGP_WSBEiJ_T0022428.1 MGP_WSBEiJ_G0016084.1 mouse_genomes_project 1 167426056 167428389 + MGP_WSBEiJ_P0022428 Mettl18 protein_coding protein_coding MGP_WSBEiJ_T0022429.1 MGP_WSBEiJ_G0016084.1 mouse_genomes_project 1 167426056 167428389 + MGP_WSBEiJ_P0022429 Mettl18 protein_coding protein_coding MGP_WSBEiJ_T0021714.1 MGP_WSBEiJ_G0015952.1 mouse_genomes_project 1 138590641 138668730 - MGP_WSBEiJ_P0021714 Camsap2 protein_coding protein_coding MGP_WSBEiJ_T0021715.1 MGP_WSBEiJ_G0015952.1 mouse_genomes_project 1 138590772 138604249 - MGP_WSBEiJ_P0021715 Camsap2 protein_coding protein_coding MGP_WSBEiJ_T0021716.1 MGP_WSBEiJ_G0015952.1 mouse_genomes_project 1 138591679 138668324 - MGP_WSBEiJ_P0021716 Camsap2 protein_coding protein_coding MGP_WSBEiJ_T0021717.1 MGP_WSBEiJ_G0015952.1 mouse_genomes_project 1 138593125 138668324 - MGP_WSBEiJ_P0021717 Camsap2 protein_coding protein_coding MGP_WSBEiJ_T0021718.1 MGP_WSBEiJ_G0015952.1 mouse_genomes_project 1 138617917 138620857 - Camsap2 protein_coding processed_transcript MGP_WSBEiJ_T0021719.1 MGP_WSBEiJ_G0015952.1 mouse_genomes_project 1 138655477 138668716 - Camsap2 protein_coding processed_transcript MGP_WSBEiJ_T0005666.1 MGP_WSBEiJ_G0004755.1 mouse_genomes_project 1 60602286 60621038 + 9530026F06Rik lincRNA lincRNA MGP_WSBEiJ_T0023500.1 MGP_WSBEiJ_G0016340.1 mouse_genomes_project 1 195572134 195605380 - MGP_WSBEiJ_P0023500 Vash2 protein_coding protein_coding MGP_WSBEiJ_T0023501.1 MGP_WSBEiJ_G0016340.1 mouse_genomes_project 1 195572136 195605086 - MGP_WSBEiJ_P0023501 Vash2 protein_coding protein_coding MGP_WSBEiJ_T0023502.1 MGP_WSBEiJ_G0016340.1 mouse_genomes_project 1 195598985 195605298 - Vash2 protein_coding processed_transcript MGP_WSBEiJ_T0000461.1 MGP_WSBEiJ_G0000406.1 mouse_genomes_project 1 60781178 60781460 + TEC TEC MGP_WSBEiJ_T0000364.1 MGP_WSBEiJ_G0000312.1 mouse_genomes_project 1 13452960 13455281 - TEC TEC MGP_WSBEiJ_T0000586.1 MGP_WSBEiJ_G0000531.1 mouse_genomes_project 1 129958988 129960303 + TEC TEC MGP_WSBEiJ_T0020679.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92632208 92890308 - MGP_WSBEiJ_P0020679 Hdac4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020680.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92632208 92890580 - MGP_WSBEiJ_P0020680 Hdac4 protein_coding protein_coding MGP_WSBEiJ_T0020681.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92636133 92857865 - MGP_WSBEiJ_P0020681 Hdac4 protein_coding protein_coding MGP_WSBEiJ_T0020682.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92636218 92711420 - Hdac4 protein_coding processed_transcript MGP_WSBEiJ_T0020683.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92636464 92638116 - Hdac4 protein_coding retained_intron MGP_WSBEiJ_T0020684.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92658692 92678836 - MGP_WSBEiJ_P0020684 Hdac4 protein_coding protein_coding MGP_WSBEiJ_T0020685.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92692348 92696875 - Hdac4 protein_coding retained_intron MGP_WSBEiJ_T0020686.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92708236 92711425 - Hdac4 protein_coding retained_intron MGP_WSBEiJ_T0020687.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92734634 92890536 - MGP_WSBEiJ_P0020687 Hdac4 protein_coding protein_coding MGP_WSBEiJ_T0020688.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92734645 92821143 - Hdac4 protein_coding processed_transcript MGP_WSBEiJ_T0020689.1 MGP_WSBEiJ_G0015723.1 mouse_genomes_project 1 92734729 92821143 - Hdac4 protein_coding processed_transcript MGP_WSBEiJ_T0019232.1 MGP_WSBEiJ_G0015447.1 mouse_genomes_project 1 54015146 54041326 + MGP_WSBEiJ_P0019232 Mob4 protein_coding protein_coding MGP_WSBEiJ_T0019233.1 MGP_WSBEiJ_G0015447.1 mouse_genomes_project 1 54015146 54040407 + MGP_WSBEiJ_P0019233 Mob4 protein_coding protein_coding MGP_WSBEiJ_T0019234.1 MGP_WSBEiJ_G0015447.1 mouse_genomes_project 1 54015175 54041325 + Mob4 protein_coding retained_intron MGP_WSBEiJ_T0019235.1 MGP_WSBEiJ_G0015447.1 mouse_genomes_project 1 54015197 54039468 + MGP_WSBEiJ_P0019235 Mob4 protein_coding protein_coding MGP_WSBEiJ_T0019236.1 MGP_WSBEiJ_G0015447.1 mouse_genomes_project 1 54015202 54039828 + MGP_WSBEiJ_P0019236 Mob4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019237.1 MGP_WSBEiJ_G0015447.1 mouse_genomes_project 1 54015235 54039252 + MGP_WSBEiJ_P0019237 Mob4 protein_coding protein_coding MGP_WSBEiJ_T0019238.1 MGP_WSBEiJ_G0015447.1 mouse_genomes_project 1 54015241 54030438 + Mob4 protein_coding retained_intron MGP_WSBEiJ_T0019239.1 MGP_WSBEiJ_G0015447.1 mouse_genomes_project 1 54032662 54033550 + Mob4 protein_coding retained_intron MGP_WSBEiJ_T0023158.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184335562 184363875 - MGP_WSBEiJ_P0023158 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023159.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184335562 184366408 - MGP_WSBEiJ_P0023159 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023160.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184337356 184366326 - MGP_WSBEiJ_P0023160 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023161.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184337488 184348953 - MGP_WSBEiJ_P0023161 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023162.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184337728 184366369 - MGP_WSBEiJ_P0023162 Coq8a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023163.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184340460 184366349 - MGP_WSBEiJ_P0023163 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023164.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184340467 184352424 - MGP_WSBEiJ_P0023164 Coq8a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023165.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184341542 184349241 - Coq8a protein_coding retained_intron MGP_WSBEiJ_T0023166.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184349325 184366349 - MGP_WSBEiJ_P0023166 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023167.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184349390 184363873 - MGP_WSBEiJ_P0023167 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023168.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184349427 184366463 - MGP_WSBEiJ_P0023168 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023169.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184349454 184353127 - MGP_WSBEiJ_P0023169 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023170.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184349460 184366360 - MGP_WSBEiJ_P0023170 Coq8a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023171.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184349463 184364052 - MGP_WSBEiJ_P0023171 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023172.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184349514 184366360 - MGP_WSBEiJ_P0023172 Coq8a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023173.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184349566 184369933 - MGP_WSBEiJ_P0023173 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0023174.1 MGP_WSBEiJ_G0016272.1 mouse_genomes_project 1 184352499 184366290 - MGP_WSBEiJ_P0023174 Coq8a protein_coding protein_coding MGP_WSBEiJ_T0020866.1 MGP_WSBEiJ_G0015766.1 mouse_genomes_project 1 96143493 96165160 + MGP_WSBEiJ_P0020866 Fam174a protein_coding protein_coding MGP_WSBEiJ_T0020867.1 MGP_WSBEiJ_G0015766.1 mouse_genomes_project 1 96143498 96157820 + MGP_WSBEiJ_P0020867 Fam174a protein_coding protein_coding MGP_WSBEiJ_T0012127.1 MGP_WSBEiJ_G0010257.1 mouse_genomes_project 1 194226095 194226236 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021105.1 MGP_WSBEiJ_G0015819.1 mouse_genomes_project 1 121962306 121993877 - MGP_WSBEiJ_P0021105 Marco protein_coding protein_coding MGP_WSBEiJ_T0021106.1 MGP_WSBEiJ_G0015819.1 mouse_genomes_project 1 121979788 121993609 - MGP_WSBEiJ_P0021106 Marco protein_coding protein_coding MGP_WSBEiJ_T0000572.1 MGP_WSBEiJ_G0000517.1 mouse_genomes_project 1 125165600 125168602 - TEC TEC MGP_WSBEiJ_T0000328.1 MGP_WSBEiJ_G0000276.1 mouse_genomes_project 1 800646 802997 + TEC TEC MGP_WSBEiJ_T0002913.1 MGP_WSBEiJ_G0002742.1 mouse_genomes_project 1 193882863 193884330 + A430027H14Rik antisense antisense MGP_WSBEiJ_T0002914.1 MGP_WSBEiJ_G0002742.1 mouse_genomes_project 1 193883416 193884306 + A430027H14Rik antisense antisense MGP_WSBEiJ_T0011850.1 MGP_WSBEiJ_G0009980.1 mouse_genomes_project 1 63000816 63001320 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020403.1 MGP_WSBEiJ_G0015664.1 mouse_genomes_project 1 86784689 86789435 + MGP_WSBEiJ_P0020403 protein_coding protein_coding MGP_WSBEiJ_T0020404.1 MGP_WSBEiJ_G0015664.1 mouse_genomes_project 1 86784693 86789653 + protein_coding processed_transcript MGP_WSBEiJ_T0020405.1 MGP_WSBEiJ_G0015664.1 mouse_genomes_project 1 86784759 86790126 + MGP_WSBEiJ_P0020405 protein_coding protein_coding MGP_WSBEiJ_T0020406.1 MGP_WSBEiJ_G0015664.1 mouse_genomes_project 1 86784857 86790017 + MGP_WSBEiJ_P0020406 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009365.1 MGP_WSBEiJ_G0007522.1 mouse_genomes_project 1 85962417 85962495 + Gm25472 miRNA miRNA MGP_WSBEiJ_T0021081.1 MGP_WSBEiJ_G0015812.1 mouse_genomes_project 1 121381174 121454807 - MGP_WSBEiJ_P0021081 Cfap221 protein_coding protein_coding MGP_WSBEiJ_T0021082.1 MGP_WSBEiJ_G0015812.1 mouse_genomes_project 1 121381352 121454821 - MGP_WSBEiJ_P0021082 Cfap221 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021083.1 MGP_WSBEiJ_G0015812.1 mouse_genomes_project 1 121381352 121452833 - MGP_WSBEiJ_P0021083 Cfap221 protein_coding protein_coding MGP_WSBEiJ_T0021084.1 MGP_WSBEiJ_G0015812.1 mouse_genomes_project 1 121417028 121454851 - MGP_WSBEiJ_P0021084 Cfap221 protein_coding protein_coding MGP_WSBEiJ_T0011900.1 MGP_WSBEiJ_G0010030.1 mouse_genomes_project 1 86723932 86724280 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097526.1 MGP_WSBEiJ_G0036189.1 mouse_genomes_project 1 29475149 29475256 - Gm23032 snRNA snRNA MGP_WSBEiJ_T0002705.1 MGP_WSBEiJ_G0002579.1 mouse_genomes_project 1 28916358 28931994 + Gm29128 antisense antisense MGP_WSBEiJ_T0023019.1 MGP_WSBEiJ_G0016242.1 mouse_genomes_project 1 179578988 179620415 + MGP_WSBEiJ_P0023019 Kmo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023020.1 MGP_WSBEiJ_G0016242.1 mouse_genomes_project 1 179590609 179621306 + MGP_WSBEiJ_P0023020 Kmo protein_coding protein_coding MGP_WSBEiJ_T0023021.1 MGP_WSBEiJ_G0016242.1 mouse_genomes_project 1 179590614 179614551 + Kmo protein_coding retained_intron MGP_WSBEiJ_T0023022.1 MGP_WSBEiJ_G0016242.1 mouse_genomes_project 1 179590639 179596037 + Kmo protein_coding processed_transcript MGP_WSBEiJ_T0023023.1 MGP_WSBEiJ_G0016242.1 mouse_genomes_project 1 179590793 179622569 + MGP_WSBEiJ_P0023023 Kmo protein_coding protein_coding MGP_WSBEiJ_T0023024.1 MGP_WSBEiJ_G0016242.1 mouse_genomes_project 1 179590852 179607746 + Kmo protein_coding processed_transcript MGP_WSBEiJ_T0011823.1 MGP_WSBEiJ_G0009953.1 mouse_genomes_project 1 56494944 56495833 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022598.1 MGP_WSBEiJ_G0016122.1 mouse_genomes_project 1 170937359 170963638 - MGP_WSBEiJ_P0022598 Lrrc52 protein_coding protein_coding MGP_WSBEiJ_T0005578.1 MGP_WSBEiJ_G0004691.1 mouse_genomes_project 1 18241869 18243711 - 6720483E21Rik lincRNA lincRNA MGP_WSBEiJ_T0002805.1 MGP_WSBEiJ_G0002655.1 mouse_genomes_project 1 120963062 120969950 - Gm27184 antisense antisense MGP_WSBEiJ_T0000633.1 MGP_WSBEiJ_G0000576.1 mouse_genomes_project 1 142745247 142748613 + TEC TEC MGP_WSBEiJ_T0009335.1 MGP_WSBEiJ_G0007492.1 mouse_genomes_project 1 37405613 37405710 - Mir6349 miRNA miRNA MGP_WSBEiJ_T0020714.1 MGP_WSBEiJ_G0015734.1 mouse_genomes_project 1 93367534 93372158 - MGP_WSBEiJ_P0020714 Otos protein_coding protein_coding MGP_WSBEiJ_T0020715.1 MGP_WSBEiJ_G0015734.1 mouse_genomes_project 1 93367535 93371571 - Otos protein_coding retained_intron MGP_WSBEiJ_T0011759.1 MGP_WSBEiJ_G0009889.1 mouse_genomes_project 1 37112922 37113694 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012033.1 MGP_WSBEiJ_G0010163.1 mouse_genomes_project 1 147951953 147952346 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011995.1 MGP_WSBEiJ_G0010125.1 mouse_genomes_project 1 126289126 126289509 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022807.1 MGP_WSBEiJ_G0016170.1 mouse_genomes_project 1 175100006 175128027 + MGP_WSBEiJ_P0022807 F11r protein_coding protein_coding MGP_WSBEiJ_T0022808.1 MGP_WSBEiJ_G0016170.1 mouse_genomes_project 1 175100050 175124293 + F11r protein_coding retained_intron MGP_WSBEiJ_T0022809.1 MGP_WSBEiJ_G0016170.1 mouse_genomes_project 1 175126298 175127093 + F11r protein_coding retained_intron MGP_WSBEiJ_T0021464.1 MGP_WSBEiJ_G0015898.1 mouse_genomes_project 1 135477644 135495067 + MGP_WSBEiJ_P0021464 Etnk2 protein_coding protein_coding MGP_WSBEiJ_T0021465.1 MGP_WSBEiJ_G0015898.1 mouse_genomes_project 1 135477648 135489854 + Etnk2 protein_coding retained_intron MGP_WSBEiJ_T0021466.1 MGP_WSBEiJ_G0015898.1 mouse_genomes_project 1 135477920 135494130 + MGP_WSBEiJ_P0021466 Etnk2 protein_coding protein_coding MGP_WSBEiJ_T0021467.1 MGP_WSBEiJ_G0015898.1 mouse_genomes_project 1 135479835 135483931 + Etnk2 protein_coding retained_intron MGP_WSBEiJ_T0021468.1 MGP_WSBEiJ_G0015898.1 mouse_genomes_project 1 135482089 135491709 + Etnk2 protein_coding processed_transcript MGP_WSBEiJ_T0018121.1 MGP_WSBEiJ_G0015229.1 mouse_genomes_project 1 1917421 1960775 + MGP_WSBEiJ_P0018121 Tcea1 protein_coding protein_coding MGP_WSBEiJ_T0018122.1 MGP_WSBEiJ_G0015229.1 mouse_genomes_project 1 1917645 1960779 + MGP_WSBEiJ_P0018122 Tcea1 protein_coding protein_coding MGP_WSBEiJ_T0019457.1 MGP_WSBEiJ_G0015488.1 mouse_genomes_project 1 59244768 59268892 - MGP_WSBEiJ_P0019457 Wdr12 protein_coding protein_coding MGP_WSBEiJ_T0019458.1 MGP_WSBEiJ_G0015488.1 mouse_genomes_project 1 59244768 59268393 - MGP_WSBEiJ_P0019458 Wdr12 protein_coding protein_coding MGP_WSBEiJ_T0019459.1 MGP_WSBEiJ_G0015488.1 mouse_genomes_project 1 59252315 59254989 - Wdr12 protein_coding retained_intron MGP_WSBEiJ_T0019460.1 MGP_WSBEiJ_G0015488.1 mouse_genomes_project 1 59253021 59255166 - Wdr12 protein_coding processed_transcript MGP_WSBEiJ_T0019461.1 MGP_WSBEiJ_G0015488.1 mouse_genomes_project 1 59257265 59268382 - MGP_WSBEiJ_P0019461 Wdr12 protein_coding protein_coding MGP_WSBEiJ_T0019462.1 MGP_WSBEiJ_G0015488.1 mouse_genomes_project 1 59257265 59268372 - MGP_WSBEiJ_P0019462 Wdr12 protein_coding protein_coding MGP_WSBEiJ_T0019463.1 MGP_WSBEiJ_G0015488.1 mouse_genomes_project 1 59263223 59267944 - Wdr12 protein_coding retained_intron MGP_WSBEiJ_T0022150.1 MGP_WSBEiJ_G0016035.1 mouse_genomes_project 1 159806772 159848259 - MGP_WSBEiJ_P0022150 Fam20b protein_coding protein_coding MGP_WSBEiJ_T0022151.1 MGP_WSBEiJ_G0016035.1 mouse_genomes_project 1 159806811 159848273 - MGP_WSBEiJ_P0022151 Fam20b protein_coding protein_coding MGP_WSBEiJ_T0022152.1 MGP_WSBEiJ_G0016035.1 mouse_genomes_project 1 159814178 159828017 - Fam20b protein_coding retained_intron MGP_WSBEiJ_T0022153.1 MGP_WSBEiJ_G0016035.1 mouse_genomes_project 1 159827862 159832927 - Fam20b protein_coding processed_transcript MGP_WSBEiJ_T0022154.1 MGP_WSBEiJ_G0016035.1 mouse_genomes_project 1 159830772 159846114 - Fam20b protein_coding retained_intron MGP_WSBEiJ_T0019745.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71285209 71353448 - MGP_WSBEiJ_P0019745 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0019746.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71285212 71353448 - MGP_WSBEiJ_P0019746 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0019747.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71285212 71353448 - MGP_WSBEiJ_P0019747 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0019748.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71285212 71353448 - MGP_WSBEiJ_P0019748 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0019749.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71285213 71353451 - MGP_WSBEiJ_P0019749 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0019750.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71285213 71353476 - MGP_WSBEiJ_P0019750 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0019751.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71285213 71353448 - MGP_WSBEiJ_P0019751 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0019752.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71285215 71309104 - Fn1 protein_coding retained_intron MGP_WSBEiJ_T0019753.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71286550 71290838 - Fn1 protein_coding retained_intron MGP_WSBEiJ_T0019754.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71289786 71299881 - MGP_WSBEiJ_P0019754 Fn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019755.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71297873 71301896 - MGP_WSBEiJ_P0019755 Fn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019756.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71299899 71302365 - Fn1 protein_coding retained_intron MGP_WSBEiJ_T0019757.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71303617 71323911 - Fn1 protein_coding retained_intron MGP_WSBEiJ_T0019758.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71329021 71340965 - MGP_WSBEiJ_P0019758 Fn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019759.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71342512 71353437 - MGP_WSBEiJ_P0019759 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0019760.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71344135 71353448 - Fn1 protein_coding retained_intron MGP_WSBEiJ_T0019761.1 MGP_WSBEiJ_G0015542.1 mouse_genomes_project 1 71345134 71353448 - MGP_WSBEiJ_P0019761 Fn1 protein_coding protein_coding MGP_WSBEiJ_T0002847.1 MGP_WSBEiJ_G0002687.1 mouse_genomes_project 1 156768640 156774402 - Gm28513 antisense antisense MGP_WSBEiJ_T0097536.1 MGP_WSBEiJ_G0036199.1 mouse_genomes_project 1 51213614 51213723 - Gm23460 snRNA snRNA MGP_WSBEiJ_T0098815.1 MGP_WSBEiJ_G0037478.1 mouse_genomes_project 1 166455327 166455461 - Gm22671 snoRNA snoRNA MGP_WSBEiJ_T0011716.1 MGP_WSBEiJ_G0009846.1 mouse_genomes_project 1 22411634 22412831 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019065.1 MGP_WSBEiJ_G0015418.1 mouse_genomes_project 1 50222298 50234823 - MGP_WSBEiJ_P0019065 Nabp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019066.1 MGP_WSBEiJ_G0015418.1 mouse_genomes_project 1 50222443 50234491 - MGP_WSBEiJ_P0019066 Nabp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019067.1 MGP_WSBEiJ_G0015418.1 mouse_genomes_project 1 50226293 50234823 - MGP_WSBEiJ_P0019067 Nabp1 protein_coding protein_coding MGP_WSBEiJ_T0019068.1 MGP_WSBEiJ_G0015418.1 mouse_genomes_project 1 50227681 50234339 - MGP_WSBEiJ_P0019068 Nabp1 protein_coding protein_coding MGP_WSBEiJ_T0019069.1 MGP_WSBEiJ_G0015418.1 mouse_genomes_project 1 50227775 50229832 - Nabp1 protein_coding retained_intron MGP_WSBEiJ_T0019070.1 MGP_WSBEiJ_G0015418.1 mouse_genomes_project 1 50232015 50234823 - Nabp1 protein_coding retained_intron MGP_WSBEiJ_T0005927.1 MGP_WSBEiJ_G0004963.1 mouse_genomes_project 1 187022655 187023154 + Gm37218 lincRNA lincRNA MGP_WSBEiJ_T0009415.1 MGP_WSBEiJ_G0007572.1 mouse_genomes_project 1 195073157 195073245 - miRNA miRNA MGP_WSBEiJ_T0023468.1 MGP_WSBEiJ_G0016335.1 mouse_genomes_project 1 194276130 194433213 + MGP_WSBEiJ_P0023468 Ptpn14 protein_coding protein_coding MGP_WSBEiJ_T0023469.1 MGP_WSBEiJ_G0016335.1 mouse_genomes_project 1 194276137 194395560 + Ptpn14 protein_coding retained_intron MGP_WSBEiJ_T0023470.1 MGP_WSBEiJ_G0016335.1 mouse_genomes_project 1 194340552 194406958 + Ptpn14 protein_coding retained_intron MGP_WSBEiJ_T0023471.1 MGP_WSBEiJ_G0016335.1 mouse_genomes_project 1 194340588 194426591 + MGP_WSBEiJ_P0023471 Ptpn14 protein_coding protein_coding MGP_WSBEiJ_T0023472.1 MGP_WSBEiJ_G0016335.1 mouse_genomes_project 1 194399994 194407445 + Ptpn14 protein_coding retained_intron MGP_WSBEiJ_T0023473.1 MGP_WSBEiJ_G0016335.1 mouse_genomes_project 1 194417666 194418441 + Ptpn14 protein_coding processed_transcript MGP_WSBEiJ_T0021792.1 MGP_WSBEiJ_G0015966.1 mouse_genomes_project 1 141959750 141983877 + MGP_WSBEiJ_P0021792 F13b protein_coding protein_coding MGP_WSBEiJ_T0021793.1 MGP_WSBEiJ_G0015966.1 mouse_genomes_project 1 141975889 141977400 + F13b protein_coding processed_transcript MGP_WSBEiJ_T0022981.1 MGP_WSBEiJ_G0016224.1 mouse_genomes_project 1 177958813 177961180 + MGP_WSBEiJ_P0022981 Olfr433 protein_coding protein_coding MGP_WSBEiJ_T0098727.1 MGP_WSBEiJ_G0037390.1 mouse_genomes_project 1 7082635 7082722 - Snord87 snoRNA snoRNA MGP_WSBEiJ_T0023085.1 MGP_WSBEiJ_G0016256.1 mouse_genomes_project 1 181817011 181868675 + MGP_WSBEiJ_P0023085 Gm16432 protein_coding protein_coding MGP_WSBEiJ_T0012046.1 MGP_WSBEiJ_G0010176.1 mouse_genomes_project 1 153988183 153989062 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002861.1 MGP_WSBEiJ_G0002700.1 mouse_genomes_project 1 165397948 165410313 + 2810442N19Rik antisense antisense MGP_WSBEiJ_T0002862.1 MGP_WSBEiJ_G0002700.1 mouse_genomes_project 1 165398151 165410322 + 2810442N19Rik antisense antisense MGP_WSBEiJ_T0020774.1 MGP_WSBEiJ_G0015747.1 mouse_genomes_project 1 94053869 94060518 - MGP_WSBEiJ_P0020774 Mterf4 protein_coding protein_coding MGP_WSBEiJ_T0020775.1 MGP_WSBEiJ_G0015747.1 mouse_genomes_project 1 94055859 94060570 - MGP_WSBEiJ_P0020775 Mterf4 protein_coding protein_coding MGP_WSBEiJ_T0020776.1 MGP_WSBEiJ_G0015747.1 mouse_genomes_project 1 94056082 94057557 - Mterf4 protein_coding processed_transcript MGP_WSBEiJ_T0020777.1 MGP_WSBEiJ_G0015747.1 mouse_genomes_project 1 94056571 94060519 - MGP_WSBEiJ_P0020777 Mterf4 protein_coding protein_coding MGP_WSBEiJ_T0020778.1 MGP_WSBEiJ_G0015747.1 mouse_genomes_project 1 94058152 94060534 - Mterf4 protein_coding retained_intron MGP_WSBEiJ_T0000732.1 MGP_WSBEiJ_G0000674.1 mouse_genomes_project 1 184178167 184180697 + TEC TEC MGP_WSBEiJ_T0020230.1 MGP_WSBEiJ_G0015627.1 mouse_genomes_project 1 82328344 82390437 - MGP_WSBEiJ_P0020230 Irs1 protein_coding protein_coding MGP_WSBEiJ_T0098775.1 MGP_WSBEiJ_G0037438.1 mouse_genomes_project 1 97623847 97623975 + Gm26078 snoRNA snoRNA MGP_WSBEiJ_T0011776.1 MGP_WSBEiJ_G0009906.1 mouse_genomes_project 1 43400278 43401023 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099966.1 MGP_WSBEiJ_G0038628.1 mouse_genomes_project 1 34852652 34852962 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099967.1 MGP_WSBEiJ_G0038628.1 mouse_genomes_project 1 34852807 34853664 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0021838.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146827750 146834693 - MGP_WSBEiJ_P0021838 Rgs1 protein_coding protein_coding MGP_WSBEiJ_T0021839.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146828667 146834507 - Rgs1 protein_coding retained_intron MGP_WSBEiJ_T0021840.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146829426 146834511 - MGP_WSBEiJ_P0021840 Rgs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021841.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146830049 146834511 - MGP_WSBEiJ_P0021841 Rgs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021842.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146830127 146834509 - MGP_WSBEiJ_P0021842 Rgs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021843.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146830127 146834479 - MGP_WSBEiJ_P0021843 Rgs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021844.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146830917 146834510 - MGP_WSBEiJ_P0021844 Rgs1 protein_coding protein_coding MGP_WSBEiJ_T0021845.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146833243 146834509 - Rgs1 protein_coding retained_intron MGP_WSBEiJ_T0021846.1 MGP_WSBEiJ_G0015977.1 mouse_genomes_project 1 146833246 146834512 - Rgs1 protein_coding retained_intron MGP_WSBEiJ_T0021043.1 MGP_WSBEiJ_G0015804.1 mouse_genomes_project 1 120032135 120041949 + Tfcp2l1 protein_coding processed_transcript MGP_WSBEiJ_T0021044.1 MGP_WSBEiJ_G0015804.1 mouse_genomes_project 1 120032136 120092326 + MGP_WSBEiJ_P0021044 Tfcp2l1 protein_coding protein_coding MGP_WSBEiJ_T0011741.1 MGP_WSBEiJ_G0009871.1 mouse_genomes_project 1 31902254 31902588 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011925.1 MGP_WSBEiJ_G0010055.1 mouse_genomes_project 1 101648381 101649048 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097595.1 MGP_WSBEiJ_G0036258.1 mouse_genomes_project 1 176623761 176623858 - Gm24817 snRNA snRNA MGP_WSBEiJ_T0011909.1 MGP_WSBEiJ_G0010039.1 mouse_genomes_project 1 92146529 92146722 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011891.1 MGP_WSBEiJ_G0010021.1 mouse_genomes_project 1 82895678 82895861 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000449.1 MGP_WSBEiJ_G0000394.1 mouse_genomes_project 1 55919677 55921515 + TEC TEC MGP_WSBEiJ_T0100412.1 MGP_WSBEiJ_G0038871.1 mouse_genomes_project 1 104192985 104279561 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0020704.1 MGP_WSBEiJ_G0015729.1 mouse_genomes_project 1 93308303 93309394 + MGP_WSBEiJ_P0020704 Olfr1412 protein_coding protein_coding MGP_WSBEiJ_T0098748.1 MGP_WSBEiJ_G0037411.1 mouse_genomes_project 1 41343303 41343437 - Gm23126 snoRNA snoRNA MGP_WSBEiJ_T0000617.1 MGP_WSBEiJ_G0000561.1 mouse_genomes_project 1 140316468 140320336 + TEC TEC MGP_WSBEiJ_T0020514.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88151124 88174188 + Sag protein_coding retained_intron MGP_WSBEiJ_T0020515.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88151124 88184284 + Sag protein_coding retained_intron MGP_WSBEiJ_T0020516.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88151124 88184769 + Sag protein_coding retained_intron MGP_WSBEiJ_T0020517.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88151124 88167205 + Sag protein_coding retained_intron MGP_WSBEiJ_T0020518.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88151124 88196265 + MGP_WSBEiJ_P0020518 Sag protein_coding protein_coding MGP_WSBEiJ_T0020519.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88151124 88196400 + MGP_WSBEiJ_P0020519 Sag protein_coding protein_coding MGP_WSBEiJ_T0020520.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88161466 88173547 + Sag protein_coding processed_transcript MGP_WSBEiJ_T0020521.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88170151 88173557 + Sag protein_coding processed_transcript MGP_WSBEiJ_T0020522.1 MGP_WSBEiJ_G0015685.1 mouse_genomes_project 1 88175377 88184786 + Sag protein_coding retained_intron MGP_WSBEiJ_T0000410.1 MGP_WSBEiJ_G0000355.1 mouse_genomes_project 1 31826410 31828009 - TEC TEC MGP_WSBEiJ_T0005709.1 MGP_WSBEiJ_G0004786.1 mouse_genomes_project 1 75886956 75889053 - Gm29065 lincRNA lincRNA MGP_WSBEiJ_T0000442.1 MGP_WSBEiJ_G0000387.1 mouse_genomes_project 1 53014217 53017928 - TEC TEC MGP_WSBEiJ_T0000444.1 MGP_WSBEiJ_G0000389.1 mouse_genomes_project 1 53596897 53598307 - TEC TEC MGP_WSBEiJ_T0100396.1 MGP_WSBEiJ_G0038855.1 mouse_genomes_project 1 69678356 69678444 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002840.1 MGP_WSBEiJ_G0002683.1 mouse_genomes_project 1 153471799 153517711 + antisense antisense MGP_WSBEiJ_T0002841.1 MGP_WSBEiJ_G0002683.1 mouse_genomes_project 1 153471832 153641166 + antisense antisense MGP_WSBEiJ_T0022696.1 MGP_WSBEiJ_G0016151.1 mouse_genomes_project 1 174826295 174851311 - MGP_WSBEiJ_P0022696 Pcp4l1 protein_coding protein_coding MGP_WSBEiJ_T0022820.1 MGP_WSBEiJ_G0016174.1 mouse_genomes_project 1 175375341 175390976 - MGP_WSBEiJ_P0022820 Slamf7 protein_coding protein_coding MGP_WSBEiJ_T0022821.1 MGP_WSBEiJ_G0016174.1 mouse_genomes_project 1 175376135 175391056 - MGP_WSBEiJ_P0022821 Slamf7 protein_coding protein_coding MGP_WSBEiJ_T0022822.1 MGP_WSBEiJ_G0016174.1 mouse_genomes_project 1 175376648 175390976 - MGP_WSBEiJ_P0022822 Slamf7 protein_coding protein_coding MGP_WSBEiJ_T0020075.1 MGP_WSBEiJ_G0015600.1 mouse_genomes_project 1 75197156 75205451 + MGP_WSBEiJ_P0020075 Des protein_coding protein_coding MGP_WSBEiJ_T0020076.1 MGP_WSBEiJ_G0015600.1 mouse_genomes_project 1 75198344 75199267 + Des protein_coding retained_intron MGP_WSBEiJ_T0020077.1 MGP_WSBEiJ_G0015600.1 mouse_genomes_project 1 75198893 75200502 + Des protein_coding retained_intron MGP_WSBEiJ_T0000763.1 MGP_WSBEiJ_G0000704.1 mouse_genomes_project 1 195885769 195887615 + TEC TEC MGP_WSBEiJ_T0005830.1 MGP_WSBEiJ_G0004889.1 mouse_genomes_project 1 139011743 139029693 + Gm19705 lincRNA lincRNA MGP_WSBEiJ_T0005831.1 MGP_WSBEiJ_G0004889.1 mouse_genomes_project 1 139017424 139023683 + Gm19705 lincRNA lincRNA MGP_WSBEiJ_T0005832.1 MGP_WSBEiJ_G0004889.1 mouse_genomes_project 1 139024352 139031897 + Gm19705 lincRNA lincRNA MGP_WSBEiJ_T0005833.1 MGP_WSBEiJ_G0004889.1 mouse_genomes_project 1 139024585 139031895 + Gm19705 lincRNA lincRNA MGP_WSBEiJ_T0098739.1 MGP_WSBEiJ_G0037402.1 mouse_genomes_project 1 20702483 20702604 + Gm24176 snoRNA snoRNA MGP_WSBEiJ_T0011965.1 MGP_WSBEiJ_G0010095.1 mouse_genomes_project 1 114955324 114956060 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018931.1 MGP_WSBEiJ_G0015389.1 mouse_genomes_project 1 41327324 41385394 + MGP_WSBEiJ_P0018931 Mrps9 protein_coding protein_coding MGP_WSBEiJ_T0018932.1 MGP_WSBEiJ_G0015389.1 mouse_genomes_project 1 41327326 41379385 + Mrps9 protein_coding processed_transcript MGP_WSBEiJ_T0018933.1 MGP_WSBEiJ_G0015389.1 mouse_genomes_project 1 41327326 41381719 + Mrps9 protein_coding processed_transcript MGP_WSBEiJ_T0018934.1 MGP_WSBEiJ_G0015389.1 mouse_genomes_project 1 41327335 41359690 + Mrps9 protein_coding retained_intron MGP_WSBEiJ_T0018935.1 MGP_WSBEiJ_G0015389.1 mouse_genomes_project 1 41338465 41378834 + Mrps9 protein_coding retained_intron MGP_WSBEiJ_T0018936.1 MGP_WSBEiJ_G0015389.1 mouse_genomes_project 1 41367436 41385388 + MGP_WSBEiJ_P0018936 Mrps9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018937.1 MGP_WSBEiJ_G0015389.1 mouse_genomes_project 1 41382762 41385388 + Mrps9 protein_coding retained_intron MGP_WSBEiJ_T0012090.1 MGP_WSBEiJ_G0010220.1 mouse_genomes_project 1 173145886 173147033 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019392.1 MGP_WSBEiJ_G0015477.1 mouse_genomes_project 1 58204130 58223154 - MGP_WSBEiJ_P0019392 Tmem237 protein_coding protein_coding MGP_WSBEiJ_T0019393.1 MGP_WSBEiJ_G0015477.1 mouse_genomes_project 1 58204137 58222866 - MGP_WSBEiJ_P0019393 Tmem237 protein_coding protein_coding MGP_WSBEiJ_T0019394.1 MGP_WSBEiJ_G0015477.1 mouse_genomes_project 1 58204451 58223437 - MGP_WSBEiJ_P0019394 Tmem237 protein_coding protein_coding MGP_WSBEiJ_T0019395.1 MGP_WSBEiJ_G0015477.1 mouse_genomes_project 1 58211587 58223167 - MGP_WSBEiJ_P0019395 Tmem237 protein_coding protein_coding MGP_WSBEiJ_T0019396.1 MGP_WSBEiJ_G0015477.1 mouse_genomes_project 1 58212176 58217371 - Tmem237 protein_coding retained_intron MGP_WSBEiJ_T0019397.1 MGP_WSBEiJ_G0015477.1 mouse_genomes_project 1 58212482 58223463 - MGP_WSBEiJ_P0019397 Tmem237 protein_coding protein_coding MGP_WSBEiJ_T0019398.1 MGP_WSBEiJ_G0015477.1 mouse_genomes_project 1 58213263 58219013 - Tmem237 protein_coding retained_intron MGP_WSBEiJ_T0005851.1 MGP_WSBEiJ_G0004904.1 mouse_genomes_project 1 154446170 154447870 - Gm28181 lincRNA lincRNA MGP_WSBEiJ_T0016453.1 MGP_WSBEiJ_G0014535.1 mouse_genomes_project 1 152909728 152938630 - Ptgs2os processed_transcript antisense MGP_WSBEiJ_T0016454.1 MGP_WSBEiJ_G0014535.1 mouse_genomes_project 1 152936993 152938776 - Ptgs2os processed_transcript retained_intron MGP_WSBEiJ_T0097528.1 MGP_WSBEiJ_G0036191.1 mouse_genomes_project 1 30481910 30481973 - Gm24732 snRNA snRNA MGP_WSBEiJ_T0018954.1 MGP_WSBEiJ_G0015394.1 mouse_genomes_project 1 41960596 42055813 + MGP_WSBEiJ_P0018954 Nck2 protein_coding protein_coding MGP_WSBEiJ_T0018955.1 MGP_WSBEiJ_G0015394.1 mouse_genomes_project 1 41961768 41978880 + Nck2 protein_coding processed_transcript MGP_WSBEiJ_T0018956.1 MGP_WSBEiJ_G0015394.1 mouse_genomes_project 1 41961768 42093195 + MGP_WSBEiJ_P0018956 Nck2 protein_coding protein_coding MGP_WSBEiJ_T0018957.1 MGP_WSBEiJ_G0015394.1 mouse_genomes_project 1 41973289 41978908 + Nck2 protein_coding processed_transcript MGP_WSBEiJ_T0018958.1 MGP_WSBEiJ_G0015394.1 mouse_genomes_project 1 42054583 42076898 + MGP_WSBEiJ_P0018958 Nck2 protein_coding protein_coding MGP_WSBEiJ_T0018959.1 MGP_WSBEiJ_G0015394.1 mouse_genomes_project 1 42055749 42092176 + MGP_WSBEiJ_P0018959 Nck2 protein_coding protein_coding MGP_WSBEiJ_T0000507.1 MGP_WSBEiJ_G0000452.1 mouse_genomes_project 1 82452199 82455034 + TEC TEC MGP_WSBEiJ_T0097570.1 MGP_WSBEiJ_G0036233.1 mouse_genomes_project 1 130727339 130727450 - Gm23056 snRNA snRNA MGP_WSBEiJ_T0098782.1 MGP_WSBEiJ_G0037445.1 mouse_genomes_project 1 109122908 109123040 + Gm22438 snoRNA snoRNA MGP_WSBEiJ_T0011970.1 MGP_WSBEiJ_G0010100.1 mouse_genomes_project 1 119644401 119645564 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012113.1 MGP_WSBEiJ_G0010243.1 mouse_genomes_project 1 185322351 185323446 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011815.1 MGP_WSBEiJ_G0009945.1 mouse_genomes_project 1 54011211 54012202 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000686.1 MGP_WSBEiJ_G0000629.1 mouse_genomes_project 1 164262784 164264549 + TEC TEC MGP_WSBEiJ_T0018421.1 MGP_WSBEiJ_G0015286.1 mouse_genomes_project 1 18123942 18131071 - MGP_WSBEiJ_P0018421 Il17f protein_coding protein_coding MGP_WSBEiJ_T0018422.1 MGP_WSBEiJ_G0015286.1 mouse_genomes_project 1 18124475 18126352 - Il17f protein_coding retained_intron MGP_WSBEiJ_T0018423.1 MGP_WSBEiJ_G0015286.1 mouse_genomes_project 1 18124579 18138575 - MGP_WSBEiJ_P0018423 Il17f protein_coding protein_coding MGP_WSBEiJ_T0018424.1 MGP_WSBEiJ_G0015286.1 mouse_genomes_project 1 18134275 18138551 - Il17f protein_coding processed_transcript MGP_WSBEiJ_T0100442.1 MGP_WSBEiJ_G0038901.1 mouse_genomes_project 1 185196607 185196739 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098746.1 MGP_WSBEiJ_G0037409.1 mouse_genomes_project 1 37800082 37800192 - Snord89 snoRNA snoRNA MGP_WSBEiJ_T0000411.1 MGP_WSBEiJ_G0000356.1 mouse_genomes_project 1 31860491 31862830 + TEC TEC MGP_WSBEiJ_T0000705.1 MGP_WSBEiJ_G0000648.1 mouse_genomes_project 1 171894117 171895817 - TEC TEC MGP_WSBEiJ_T0023355.1 MGP_WSBEiJ_G0016311.1 mouse_genomes_project 1 187731028 187731642 + Hhipl2 protein_coding processed_transcript MGP_WSBEiJ_T0023356.1 MGP_WSBEiJ_G0016311.1 mouse_genomes_project 1 187731070 187749053 + MGP_WSBEiJ_P0023356 Hhipl2 protein_coding protein_coding MGP_WSBEiJ_T0023357.1 MGP_WSBEiJ_G0016311.1 mouse_genomes_project 1 187731274 187749374 + MGP_WSBEiJ_P0023357 Hhipl2 protein_coding protein_coding MGP_WSBEiJ_T0023358.1 MGP_WSBEiJ_G0016311.1 mouse_genomes_project 1 187731371 187736275 + Hhipl2 protein_coding processed_transcript MGP_WSBEiJ_T0005743.1 MGP_WSBEiJ_G0004815.1 mouse_genomes_project 1 90826807 90831652 - Gm28721 lincRNA lincRNA MGP_WSBEiJ_T0019418.1 MGP_WSBEiJ_G0015481.1 mouse_genomes_project 1 58605484 58610015 + MGP_WSBEiJ_P0019418 Fzd7 protein_coding protein_coding MGP_WSBEiJ_T0097538.1 MGP_WSBEiJ_G0036201.1 mouse_genomes_project 1 56442604 56442761 + Gm24014 snRNA snRNA MGP_WSBEiJ_T0000587.1 MGP_WSBEiJ_G0000532.1 mouse_genomes_project 1 131146524 131149019 + TEC TEC MGP_WSBEiJ_T0002758.1 MGP_WSBEiJ_G0002622.1 mouse_genomes_project 1 71353112 71357724 + Apol7d antisense antisense MGP_WSBEiJ_T0002759.1 MGP_WSBEiJ_G0002622.1 mouse_genomes_project 1 71353163 71365022 + Apol7d antisense antisense MGP_WSBEiJ_T0002760.1 MGP_WSBEiJ_G0002622.1 mouse_genomes_project 1 71353610 71365814 + Apol7d antisense antisense MGP_WSBEiJ_T0002761.1 MGP_WSBEiJ_G0002622.1 mouse_genomes_project 1 71353614 71357513 + Apol7d antisense antisense MGP_WSBEiJ_T0011743.1 MGP_WSBEiJ_G0009873.1 mouse_genomes_project 1 32494712 32495004 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011757.1 MGP_WSBEiJ_G0009887.1 mouse_genomes_project 1 36681709 36682238 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096750.1 MGP_WSBEiJ_G0035431.1 mouse_genomes_project 1 32720522 32721471 + pseudogene pseudogene MGP_WSBEiJ_T0022932.1 MGP_WSBEiJ_G0016198.1 mouse_genomes_project 1 176322042 176329749 + MGP_WSBEiJ_P0022932 Vsig8 protein_coding protein_coding MGP_WSBEiJ_T0022933.1 MGP_WSBEiJ_G0016198.1 mouse_genomes_project 1 176326047 176329748 + MGP_WSBEiJ_P0022933 Vsig8 protein_coding protein_coding MGP_WSBEiJ_T0019473.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59356308 59524141 + MGP_WSBEiJ_P0019473 Nbeal1 protein_coding protein_coding MGP_WSBEiJ_T0019474.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59356521 59361616 + Nbeal1 protein_coding retained_intron MGP_WSBEiJ_T0019475.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59397439 59423273 + MGP_WSBEiJ_P0019475 Nbeal1 protein_coding protein_coding MGP_WSBEiJ_T0019476.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59402449 59407600 + Nbeal1 protein_coding retained_intron MGP_WSBEiJ_T0019477.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59423175 59473409 + Nbeal1 protein_coding retained_intron MGP_WSBEiJ_T0019478.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59451593 59512268 + MGP_WSBEiJ_P0019478 Nbeal1 protein_coding protein_coding MGP_WSBEiJ_T0019479.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59451601 59516457 + MGP_WSBEiJ_P0019479 Nbeal1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019480.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59457426 59460644 + Nbeal1 protein_coding retained_intron MGP_WSBEiJ_T0019481.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59470158 59484303 + MGP_WSBEiJ_P0019481 Nbeal1 protein_coding protein_coding MGP_WSBEiJ_T0019482.1 MGP_WSBEiJ_G0015490.1 mouse_genomes_project 1 59475305 59478775 + Nbeal1 protein_coding retained_intron MGP_WSBEiJ_T0002857.1 MGP_WSBEiJ_G0002697.1 mouse_genomes_project 1 164401871 164402660 + Gm37634 antisense antisense MGP_WSBEiJ_T0098793.1 MGP_WSBEiJ_G0037456.1 mouse_genomes_project 1 136699216 136699342 + Gm25612 snoRNA snoRNA MGP_WSBEiJ_T0021876.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153227999 153286663 + MGP_WSBEiJ_P0021876 Tpr protein_coding protein_coding MGP_WSBEiJ_T0021877.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153228411 153286783 + MGP_WSBEiJ_P0021877 Tpr protein_coding protein_coding MGP_WSBEiJ_T0021878.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153228545 153230657 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021879.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153247726 153249694 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021880.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153250518 153252134 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021881.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153260451 153264066 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021882.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153265076 153276037 + MGP_WSBEiJ_P0021882 Tpr protein_coding protein_coding MGP_WSBEiJ_T0021883.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153266136 153276034 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021884.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153273153 153280070 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021885.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153274653 153286775 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021886.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153275918 153286775 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021887.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153282765 153286775 + MGP_WSBEiJ_P0021887 Tpr protein_coding protein_coding MGP_WSBEiJ_T0021888.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153284302 153286777 + Tpr protein_coding retained_intron MGP_WSBEiJ_T0021889.1 MGP_WSBEiJ_G0015985.1 mouse_genomes_project 1 153285718 153286639 + Tpr protein_coding processed_transcript MGP_WSBEiJ_T0023106.1 MGP_WSBEiJ_G0016263.1 mouse_genomes_project 1 183071790 183672495 - MGP_WSBEiJ_P0023106 Smyd3 protein_coding protein_coding MGP_WSBEiJ_T0023107.1 MGP_WSBEiJ_G0016263.1 mouse_genomes_project 1 183074890 183382308 - Smyd3 protein_coding processed_transcript MGP_WSBEiJ_T0023108.1 MGP_WSBEiJ_G0016263.1 mouse_genomes_project 1 183074995 183517979 - Smyd3 protein_coding processed_transcript MGP_WSBEiJ_T0023109.1 MGP_WSBEiJ_G0016263.1 mouse_genomes_project 1 183077118 183112622 - Smyd3 protein_coding processed_transcript MGP_WSBEiJ_T0023110.1 MGP_WSBEiJ_G0016263.1 mouse_genomes_project 1 183522076 183549772 - Smyd3 protein_coding processed_transcript MGP_WSBEiJ_T0023111.1 MGP_WSBEiJ_G0016263.1 mouse_genomes_project 1 183539557 183672502 - MGP_WSBEiJ_P0023111 Smyd3 protein_coding protein_coding MGP_WSBEiJ_T0023112.1 MGP_WSBEiJ_G0016263.1 mouse_genomes_project 1 183659530 183672466 - MGP_WSBEiJ_P0023112 Smyd3 protein_coding protein_coding MGP_WSBEiJ_T0005907.1 MGP_WSBEiJ_G0004949.1 mouse_genomes_project 1 180406585 180512869 - lincRNA lincRNA MGP_WSBEiJ_T0020277.1 MGP_WSBEiJ_G0015638.1 mouse_genomes_project 1 83311001 83332991 + Daw1 protein_coding retained_intron MGP_WSBEiJ_T0020278.1 MGP_WSBEiJ_G0015638.1 mouse_genomes_project 1 83311011 83364278 + MGP_WSBEiJ_P0020278 Daw1 protein_coding protein_coding MGP_WSBEiJ_T0020279.1 MGP_WSBEiJ_G0015638.1 mouse_genomes_project 1 83311011 83364284 + MGP_WSBEiJ_P0020279 Daw1 protein_coding protein_coding MGP_WSBEiJ_T0020280.1 MGP_WSBEiJ_G0015638.1 mouse_genomes_project 1 83311018 83364280 + MGP_WSBEiJ_P0020280 Daw1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020281.1 MGP_WSBEiJ_G0015638.1 mouse_genomes_project 1 83311030 83364284 + MGP_WSBEiJ_P0020281 Daw1 protein_coding protein_coding MGP_WSBEiJ_T0005678.1 MGP_WSBEiJ_G0004764.1 mouse_genomes_project 1 63359200 63362666 + Gm26649 lincRNA lincRNA MGP_WSBEiJ_T0020232.1 MGP_WSBEiJ_G0015629.1 mouse_genomes_project 1 82415847 82539218 + MGP_WSBEiJ_P0020232 Rhbdd1 protein_coding protein_coding MGP_WSBEiJ_T0020233.1 MGP_WSBEiJ_G0015629.1 mouse_genomes_project 1 82416037 82419126 + Rhbdd1 protein_coding retained_intron MGP_WSBEiJ_T0020234.1 MGP_WSBEiJ_G0015629.1 mouse_genomes_project 1 82438160 82539218 + MGP_WSBEiJ_P0020234 Rhbdd1 protein_coding protein_coding MGP_WSBEiJ_T0011767.1 MGP_WSBEiJ_G0009897.1 mouse_genomes_project 1 42316336 42317615 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019174.1 MGP_WSBEiJ_G0015436.1 mouse_genomes_project 1 52141607 52149739 - MGP_WSBEiJ_P0019174 Asnsd1 protein_coding protein_coding MGP_WSBEiJ_T0019175.1 MGP_WSBEiJ_G0015436.1 mouse_genomes_project 1 52141635 52149739 - MGP_WSBEiJ_P0019175 Asnsd1 protein_coding protein_coding MGP_WSBEiJ_T0019176.1 MGP_WSBEiJ_G0015436.1 mouse_genomes_project 1 52144817 52149739 - MGP_WSBEiJ_P0019176 Asnsd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019177.1 MGP_WSBEiJ_G0015436.1 mouse_genomes_project 1 52145224 52148262 - MGP_WSBEiJ_P0019177 Asnsd1 protein_coding protein_coding MGP_WSBEiJ_T0019178.1 MGP_WSBEiJ_G0015436.1 mouse_genomes_project 1 52147303 52149557 - Asnsd1 protein_coding retained_intron MGP_WSBEiJ_T0005741.1 MGP_WSBEiJ_G0004813.1 mouse_genomes_project 1 89890080 89937043 - C030007H22Rik lincRNA lincRNA MGP_WSBEiJ_T0022060.1 MGP_WSBEiJ_G0016020.1 mouse_genomes_project 1 158292996 158294507 - BC034090 protein_coding retained_intron MGP_WSBEiJ_T0022061.1 MGP_WSBEiJ_G0016020.1 mouse_genomes_project 1 158292998 158327704 - MGP_WSBEiJ_P0022061 BC034090 protein_coding protein_coding MGP_WSBEiJ_T0022062.1 MGP_WSBEiJ_G0016020.1 mouse_genomes_project 1 158298050 158305489 - BC034090 protein_coding processed_transcript MGP_WSBEiJ_T0022063.1 MGP_WSBEiJ_G0016020.1 mouse_genomes_project 1 158298800 158305238 - BC034090 protein_coding processed_transcript MGP_WSBEiJ_T0022064.1 MGP_WSBEiJ_G0016020.1 mouse_genomes_project 1 158305753 158309942 - BC034090 protein_coding processed_transcript MGP_WSBEiJ_T0022065.1 MGP_WSBEiJ_G0016020.1 mouse_genomes_project 1 158306103 158313035 - MGP_WSBEiJ_P0022065 BC034090 protein_coding protein_coding MGP_WSBEiJ_T0022066.1 MGP_WSBEiJ_G0016020.1 mouse_genomes_project 1 158306187 158321813 - BC034090 protein_coding retained_intron MGP_WSBEiJ_T0022067.1 MGP_WSBEiJ_G0016020.1 mouse_genomes_project 1 158309163 158311949 - BC034090 protein_coding retained_intron MGP_WSBEiJ_T0019390.1 MGP_WSBEiJ_G0015476.1 mouse_genomes_project 1 58151478 58198441 - MGP_WSBEiJ_P0019390 Als2cr11 protein_coding protein_coding MGP_WSBEiJ_T0019391.1 MGP_WSBEiJ_G0015476.1 mouse_genomes_project 1 58171711 58188165 - Als2cr11 protein_coding processed_transcript MGP_WSBEiJ_T0011920.1 MGP_WSBEiJ_G0010050.1 mouse_genomes_project 1 99189038 99189326 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019274.1 MGP_WSBEiJ_G0015456.1 mouse_genomes_project 1 56382618 56394060 + MGP_WSBEiJ_P0019274 9430016H08Rik protein_coding protein_coding MGP_WSBEiJ_T0018671.1 MGP_WSBEiJ_G0015337.1 mouse_genomes_project 1 34476565 34497390 - MGP_WSBEiJ_P0018671 Lman2l protein_coding protein_coding MGP_WSBEiJ_T0018672.1 MGP_WSBEiJ_G0015337.1 mouse_genomes_project 1 34478759 34502954 - MGP_WSBEiJ_P0018672 Lman2l protein_coding protein_coding MGP_WSBEiJ_T0018673.1 MGP_WSBEiJ_G0015337.1 mouse_genomes_project 1 34479888 34499554 - Lman2l protein_coding retained_intron MGP_WSBEiJ_T0018674.1 MGP_WSBEiJ_G0015337.1 mouse_genomes_project 1 34479888 34502954 - MGP_WSBEiJ_P0018674 Lman2l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018675.1 MGP_WSBEiJ_G0015337.1 mouse_genomes_project 1 34479888 34502954 - MGP_WSBEiJ_P0018675 Lman2l protein_coding protein_coding MGP_WSBEiJ_T0018676.1 MGP_WSBEiJ_G0015337.1 mouse_genomes_project 1 34481234 34485096 - MGP_WSBEiJ_P0018676 Lman2l protein_coding protein_coding MGP_WSBEiJ_T0018677.1 MGP_WSBEiJ_G0015337.1 mouse_genomes_project 1 34485121 34502954 - MGP_WSBEiJ_P0018677 Lman2l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018678.1 MGP_WSBEiJ_G0015337.1 mouse_genomes_project 1 34501430 34502940 - Lman2l protein_coding retained_intron MGP_WSBEiJ_T0019785.1 MGP_WSBEiJ_G0015552.1 mouse_genomes_project 1 72659126 72676094 - MGP_WSBEiJ_P0019785 Igfbp5 protein_coding protein_coding MGP_WSBEiJ_T0019786.1 MGP_WSBEiJ_G0015552.1 mouse_genomes_project 1 72659259 72675472 - Igfbp5 protein_coding processed_transcript MGP_WSBEiJ_T0022309.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164604860 164615990 - MGP_WSBEiJ_P0022309 Prdx6 protein_coding protein_coding MGP_WSBEiJ_T0022310.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164605763 164615957 - MGP_WSBEiJ_P0022310 Prdx6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022311.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164606312 164615940 - Prdx6 protein_coding processed_transcript MGP_WSBEiJ_T0022312.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164606346 164615937 - MGP_WSBEiJ_P0022312 Prdx6 protein_coding protein_coding MGP_WSBEiJ_T0022313.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164606383 164615892 - Prdx6 protein_coding processed_transcript MGP_WSBEiJ_T0022314.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164606556 164615325 - Prdx6 protein_coding processed_transcript MGP_WSBEiJ_T0022315.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164608381 164615937 - Prdx6 protein_coding processed_transcript MGP_WSBEiJ_T0022316.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164613375 164615933 - Prdx6 protein_coding retained_intron MGP_WSBEiJ_T0022317.1 MGP_WSBEiJ_G0016059.1 mouse_genomes_project 1 164614333 164615933 - Prdx6 protein_coding retained_intron MGP_WSBEiJ_T0011778.1 MGP_WSBEiJ_G0009908.1 mouse_genomes_project 1 43998598 43999122 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020456.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87663582 87695353 + Gigyf2 protein_coding processed_transcript MGP_WSBEiJ_T0020457.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87663587 87793389 + MGP_WSBEiJ_P0020457 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020458.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87663613 87791736 + MGP_WSBEiJ_P0020458 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020459.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87663614 87697410 + Gigyf2 protein_coding processed_transcript MGP_WSBEiJ_T0020460.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87663617 87764928 + MGP_WSBEiJ_P0020460 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020461.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87663630 87665592 + Gigyf2 protein_coding retained_intron MGP_WSBEiJ_T0020462.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87663632 87730269 + Gigyf2 protein_coding processed_transcript MGP_WSBEiJ_T0020463.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87663650 87773627 + MGP_WSBEiJ_P0020463 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020464.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87694088 87791736 + MGP_WSBEiJ_P0020464 Gigyf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020465.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87694088 87791736 + MGP_WSBEiJ_P0020465 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020466.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87703215 87718385 + Gigyf2 protein_coding retained_intron MGP_WSBEiJ_T0020467.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87703574 87705069 + Gigyf2 protein_coding retained_intron MGP_WSBEiJ_T0020468.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87725698 87746684 + Gigyf2 protein_coding processed_transcript MGP_WSBEiJ_T0020469.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87725719 87746415 + MGP_WSBEiJ_P0020469 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020472.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87743042 87784613 + MGP_WSBEiJ_P0020472 Gigyf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020473.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87743101 87747073 + MGP_WSBEiJ_P0020473 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020474.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87744287 87746983 + MGP_WSBEiJ_P0020474 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020475.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87744319 87750074 + MGP_WSBEiJ_P0020475 Gigyf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020476.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87744335 87746738 + MGP_WSBEiJ_P0020476 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020477.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87746750 87759707 + MGP_WSBEiJ_P0020477 Gigyf2 protein_coding protein_coding MGP_WSBEiJ_T0020478.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87759575 87761607 + Gigyf2 protein_coding retained_intron MGP_WSBEiJ_T0020479.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87772947 87793389 + Gigyf2 protein_coding processed_transcript MGP_WSBEiJ_T0020480.1 MGP_WSBEiJ_G0015678.1 mouse_genomes_project 1 87785913 87791799 + Gigyf2 protein_coding retained_intron MGP_WSBEiJ_T0005805.1 MGP_WSBEiJ_G0004865.1 mouse_genomes_project 1 123751334 123804919 + Gm28590 lincRNA lincRNA MGP_WSBEiJ_T0018434.1 MGP_WSBEiJ_G0015289.1 mouse_genomes_project 1 18307810 18311712 + Efhc1 protein_coding processed_transcript MGP_WSBEiJ_T0018435.1 MGP_WSBEiJ_G0015289.1 mouse_genomes_project 1 18307872 18344596 + MGP_WSBEiJ_P0018435 Efhc1 protein_coding protein_coding MGP_WSBEiJ_T0020925.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106790141 106813838 + 2310035C23Rik protein_coding processed_transcript MGP_WSBEiJ_T0020926.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106790141 106883230 + MGP_WSBEiJ_P0020926 2310035C23Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020927.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106790163 106883233 + MGP_WSBEiJ_P0020927 2310035C23Rik protein_coding protein_coding MGP_WSBEiJ_T0020928.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106790193 106884349 + MGP_WSBEiJ_P0020928 2310035C23Rik protein_coding protein_coding MGP_WSBEiJ_T0020929.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106790203 106882869 + MGP_WSBEiJ_P0020929 2310035C23Rik protein_coding protein_coding MGP_WSBEiJ_T0020930.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106790217 106791431 + 2310035C23Rik protein_coding processed_transcript MGP_WSBEiJ_T0020931.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106790721 106867673 + 2310035C23Rik protein_coding retained_intron MGP_WSBEiJ_T0020932.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106823455 106884344 + MGP_WSBEiJ_P0020932 2310035C23Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020933.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106831745 106844812 + 2310035C23Rik protein_coding retained_intron MGP_WSBEiJ_T0020934.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106860024 106863752 + 2310035C23Rik protein_coding retained_intron MGP_WSBEiJ_T0020935.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106869383 106882683 + 2310035C23Rik protein_coding retained_intron MGP_WSBEiJ_T0020936.1 MGP_WSBEiJ_G0015779.1 mouse_genomes_project 1 106870151 106880151 + 2310035C23Rik protein_coding retained_intron MGP_WSBEiJ_T0023027.1 MGP_WSBEiJ_G0016245.1 mouse_genomes_project 1 179659068 179704395 + Wdr64 protein_coding processed_transcript MGP_WSBEiJ_T0023028.1 MGP_WSBEiJ_G0016245.1 mouse_genomes_project 1 179659068 179783726 + MGP_WSBEiJ_P0023028 Wdr64 protein_coding protein_coding MGP_WSBEiJ_T0023029.1 MGP_WSBEiJ_G0016245.1 mouse_genomes_project 1 179659068 179783726 + MGP_WSBEiJ_P0023029 Wdr64 protein_coding protein_coding MGP_WSBEiJ_T0023030.1 MGP_WSBEiJ_G0016245.1 mouse_genomes_project 1 179659262 179783358 + MGP_WSBEiJ_P0023030 Wdr64 protein_coding protein_coding MGP_WSBEiJ_T0023031.1 MGP_WSBEiJ_G0016245.1 mouse_genomes_project 1 179728940 179783723 + MGP_WSBEiJ_P0023031 Wdr64 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005955.1 MGP_WSBEiJ_G0004984.1 mouse_genomes_project 1 191347658 191350811 + 1700023G09Rik lincRNA lincRNA MGP_WSBEiJ_T0005956.1 MGP_WSBEiJ_G0004984.1 mouse_genomes_project 1 191347687 191350025 + 1700023G09Rik lincRNA lincRNA MGP_WSBEiJ_T0020585.1 MGP_WSBEiJ_G0015705.1 mouse_genomes_project 1 91425421 91505777 - MGP_WSBEiJ_P0020585 Col6a3 protein_coding protein_coding MGP_WSBEiJ_T0020586.1 MGP_WSBEiJ_G0015705.1 mouse_genomes_project 1 91425421 91505777 - MGP_WSBEiJ_P0020586 Col6a3 protein_coding protein_coding MGP_WSBEiJ_T0020587.1 MGP_WSBEiJ_G0015705.1 mouse_genomes_project 1 91426372 91505758 - MGP_WSBEiJ_P0020587 Col6a3 protein_coding protein_coding MGP_WSBEiJ_T0020588.1 MGP_WSBEiJ_G0015705.1 mouse_genomes_project 1 91426901 91432743 - Col6a3 protein_coding retained_intron MGP_WSBEiJ_T0020589.1 MGP_WSBEiJ_G0015705.1 mouse_genomes_project 1 91450916 91467378 - Col6a3 protein_coding retained_intron MGP_WSBEiJ_T0020590.1 MGP_WSBEiJ_G0015705.1 mouse_genomes_project 1 91453338 91454168 - Col6a3 protein_coding retained_intron MGP_WSBEiJ_T0020591.1 MGP_WSBEiJ_G0015705.1 mouse_genomes_project 1 91461871 91505734 - MGP_WSBEiJ_P0020591 Col6a3 protein_coding protein_coding MGP_WSBEiJ_T0020592.1 MGP_WSBEiJ_G0015705.1 mouse_genomes_project 1 91482619 91505777 - MGP_WSBEiJ_P0020592 Col6a3 protein_coding protein_coding MGP_WSBEiJ_T0002697.1 MGP_WSBEiJ_G0002573.1 mouse_genomes_project 1 14896574 14922703 - Gm28154 antisense antisense MGP_WSBEiJ_T0000504.1 MGP_WSBEiJ_G0000449.1 mouse_genomes_project 1 80759207 80761038 - TEC TEC MGP_WSBEiJ_T0020817.1 MGP_WSBEiJ_G0015754.1 mouse_genomes_project 1 94393730 94409804 - MGP_WSBEiJ_P0020817 Stk25 protein_coding protein_coding MGP_WSBEiJ_T0020818.1 MGP_WSBEiJ_G0015754.1 mouse_genomes_project 1 94395879 94409711 - Stk25 protein_coding retained_intron MGP_WSBEiJ_T0020819.1 MGP_WSBEiJ_G0015754.1 mouse_genomes_project 1 94396341 94399344 - Stk25 protein_coding retained_intron MGP_WSBEiJ_T0020820.1 MGP_WSBEiJ_G0015754.1 mouse_genomes_project 1 94397378 94399771 - Stk25 protein_coding retained_intron MGP_WSBEiJ_T0020821.1 MGP_WSBEiJ_G0015754.1 mouse_genomes_project 1 94399832 94409561 - MGP_WSBEiJ_P0020821 Stk25 protein_coding protein_coding MGP_WSBEiJ_T0020822.1 MGP_WSBEiJ_G0015754.1 mouse_genomes_project 1 94401111 94435536 - MGP_WSBEiJ_P0020822 Stk25 protein_coding protein_coding MGP_WSBEiJ_T0002807.1 MGP_WSBEiJ_G0002657.1 mouse_genomes_project 1 129539576 129563298 - 2900009J06Rik antisense antisense MGP_WSBEiJ_T0002808.1 MGP_WSBEiJ_G0002657.1 mouse_genomes_project 1 129539576 129563260 - 2900009J06Rik antisense antisense MGP_WSBEiJ_T0019085.1 MGP_WSBEiJ_G0015420.1 mouse_genomes_project 1 50758576 50883154 + MGP_WSBEiJ_P0019085 Stat4 protein_coding protein_coding MGP_WSBEiJ_T0019086.1 MGP_WSBEiJ_G0015420.1 mouse_genomes_project 1 50780185 50883149 + MGP_WSBEiJ_P0019086 Stat4 protein_coding protein_coding MGP_WSBEiJ_T0019087.1 MGP_WSBEiJ_G0015420.1 mouse_genomes_project 1 50780568 50847092 + Stat4 protein_coding retained_intron MGP_WSBEiJ_T0019088.1 MGP_WSBEiJ_G0015420.1 mouse_genomes_project 1 50881411 50883153 + Stat4 protein_coding retained_intron MGP_WSBEiJ_T0000767.1 MGP_WSBEiJ_G0000708.1 mouse_genomes_project 1 197513567 197515664 - TEC TEC MGP_WSBEiJ_T0000768.1 MGP_WSBEiJ_G0000708.1 mouse_genomes_project 1 197513618 197515169 - TEC TEC MGP_WSBEiJ_T0018236.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7186510 7187866 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018237.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7186529 7195926 + MGP_WSBEiJ_P0018237 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018238.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7186740 7289379 + MGP_WSBEiJ_P0018238 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018239.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7186749 7211600 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018240.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7186772 7208883 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018241.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7186785 7216948 + MGP_WSBEiJ_P0018241 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018242.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7188290 7208707 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018243.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7188296 7218057 + MGP_WSBEiJ_P0018243 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018244.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7188296 7217700 + MGP_WSBEiJ_P0018244 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018245.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7188300 7208693 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018246.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7188308 7216932 + MGP_WSBEiJ_P0018246 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018247.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7188346 7209820 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018248.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7188678 7208658 + MGP_WSBEiJ_P0018248 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018249.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7194884 7288756 + MGP_WSBEiJ_P0018249 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018250.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7206758 7216405 + MGP_WSBEiJ_P0018250 Cspp1 protein_coding protein_coding MGP_WSBEiJ_T0018251.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7221286 7226295 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018252.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7224485 7236880 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018253.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7224963 7235442 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018254.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7225016 7241318 + MGP_WSBEiJ_P0018254 Cspp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018255.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7238809 7241380 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018256.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7246937 7260736 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018257.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7255102 7260725 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018258.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7264995 7286895 + MGP_WSBEiJ_P0018258 Cspp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018259.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7267544 7268841 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018260.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7278941 7282740 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018261.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7282680 7286183 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0018262.1 MGP_WSBEiJ_G0015249.1 mouse_genomes_project 1 7286691 7288933 + Cspp1 protein_coding retained_intron MGP_WSBEiJ_T0022994.1 MGP_WSBEiJ_G0016235.1 mouse_genomes_project 1 178334409 178335418 + MGP_WSBEiJ_P0022994 Olfr248 protein_coding protein_coding MGP_WSBEiJ_T0005612.1 MGP_WSBEiJ_G0004720.1 mouse_genomes_project 1 40191848 40359759 + Gm29260 lincRNA lincRNA MGP_WSBEiJ_T0005613.1 MGP_WSBEiJ_G0004720.1 mouse_genomes_project 1 40336321 40338049 + Gm29260 lincRNA lincRNA MGP_WSBEiJ_T0022068.1 MGP_WSBEiJ_G0016021.1 mouse_genomes_project 1 158358950 158504544 - MGP_WSBEiJ_P0022068 Xpr1 protein_coding protein_coding MGP_WSBEiJ_T0022069.1 MGP_WSBEiJ_G0016021.1 mouse_genomes_project 1 158362237 158504622 - MGP_WSBEiJ_P0022069 Xpr1 protein_coding protein_coding MGP_WSBEiJ_T0022070.1 MGP_WSBEiJ_G0016021.1 mouse_genomes_project 1 158365441 158394359 - Xpr1 protein_coding retained_intron MGP_WSBEiJ_T0022071.1 MGP_WSBEiJ_G0016021.1 mouse_genomes_project 1 158365917 158504630 - MGP_WSBEiJ_P0022071 Xpr1 protein_coding protein_coding MGP_WSBEiJ_T0022072.1 MGP_WSBEiJ_G0016021.1 mouse_genomes_project 1 158373378 158376292 - Xpr1 protein_coding retained_intron MGP_WSBEiJ_T0022073.1 MGP_WSBEiJ_G0016021.1 mouse_genomes_project 1 158408517 158504610 - Xpr1 protein_coding retained_intron MGP_WSBEiJ_T0011048.1 MGP_WSBEiJ_G0009205.1 mouse_genomes_project 1 30646172 30646464 + Gm23024 misc_RNA misc_RNA MGP_WSBEiJ_T0023649.1 MGP_WSBEiJ_G0016369.1 mouse_genomes_project 1 197966853 197967911 - MGP_WSBEiJ_P0023649 G0s2 protein_coding protein_coding MGP_WSBEiJ_T0023509.1 MGP_WSBEiJ_G0016342.1 mouse_genomes_project 1 195662045 195669880 + MGP_WSBEiJ_P0023509 Spata45 protein_coding protein_coding MGP_WSBEiJ_T0023510.1 MGP_WSBEiJ_G0016342.1 mouse_genomes_project 1 195662225 195669887 + MGP_WSBEiJ_P0023510 Spata45 protein_coding protein_coding MGP_WSBEiJ_T0000452.1 MGP_WSBEiJ_G0000397.1 mouse_genomes_project 1 58775654 58777518 - TEC TEC MGP_WSBEiJ_T0009412.1 MGP_WSBEiJ_G0007569.1 mouse_genomes_project 1 189582332 189582401 + Mir664 miRNA miRNA MGP_WSBEiJ_T0000719.1 MGP_WSBEiJ_G0000662.1 mouse_genomes_project 1 180735399 180736990 - TEC TEC MGP_WSBEiJ_T0097235.1 MGP_WSBEiJ_G0035916.1 mouse_genomes_project 1 50616479 50617757 - Gm29453 sense_intronic sense_intronic MGP_WSBEiJ_T0000405.1 MGP_WSBEiJ_G0000351.1 mouse_genomes_project 1 31548097 31550674 - TEC TEC MGP_WSBEiJ_T0020547.1 MGP_WSBEiJ_G0015693.1 mouse_genomes_project 1 88722577 88743498 - MGP_WSBEiJ_P0020547 protein_coding protein_coding MGP_WSBEiJ_T0011926.1 MGP_WSBEiJ_G0010056.1 mouse_genomes_project 1 101661404 101661761 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005762.1 MGP_WSBEiJ_G0004833.1 mouse_genomes_project 1 97404947 97421169 - Gm29601 lincRNA lincRNA MGP_WSBEiJ_T0011704.1 MGP_WSBEiJ_G0009834.1 mouse_genomes_project 1 17786353 17786906 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005957.1 MGP_WSBEiJ_G0004985.1 mouse_genomes_project 1 191882562 191897348 + Gm37896 lincRNA lincRNA MGP_WSBEiJ_T0000692.1 MGP_WSBEiJ_G0000635.1 mouse_genomes_project 1 165197535 165200183 - TEC TEC MGP_WSBEiJ_T0000350.1 MGP_WSBEiJ_G0000298.1 mouse_genomes_project 1 10235245 10235796 - TEC TEC MGP_WSBEiJ_T0005905.1 MGP_WSBEiJ_G0004947.1 mouse_genomes_project 1 179530627 179534677 + Gm36307 lincRNA lincRNA MGP_WSBEiJ_T0021407.1 MGP_WSBEiJ_G0015886.1 mouse_genomes_project 1 134561698 134576706 - MGP_WSBEiJ_P0021407 Cntn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021408.1 MGP_WSBEiJ_G0015886.1 mouse_genomes_project 1 134561698 134567901 - MGP_WSBEiJ_P0021408 Cntn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021409.1 MGP_WSBEiJ_G0015886.1 mouse_genomes_project 1 134564039 134598531 - Cntn2 protein_coding retained_intron MGP_WSBEiJ_T0021410.1 MGP_WSBEiJ_G0015886.1 mouse_genomes_project 1 134564043 134598580 - MGP_WSBEiJ_P0021410 Cntn2 protein_coding protein_coding MGP_WSBEiJ_T0021411.1 MGP_WSBEiJ_G0015886.1 mouse_genomes_project 1 134564053 134598506 - Cntn2 protein_coding retained_intron MGP_WSBEiJ_T0021412.1 MGP_WSBEiJ_G0015886.1 mouse_genomes_project 1 134569264 134571258 - Cntn2 protein_coding retained_intron MGP_WSBEiJ_T0021413.1 MGP_WSBEiJ_G0015886.1 mouse_genomes_project 1 134584302 134589195 - MGP_WSBEiJ_P0021413 Cntn2 protein_coding protein_coding MGP_WSBEiJ_T0021414.1 MGP_WSBEiJ_G0015886.1 mouse_genomes_project 1 134588967 134598897 - MGP_WSBEiJ_P0021414 Cntn2 protein_coding protein_coding MGP_WSBEiJ_T0012016.1 MGP_WSBEiJ_G0010146.1 mouse_genomes_project 1 141287829 141288052 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005572.1 MGP_WSBEiJ_G0004685.1 mouse_genomes_project 1 14402383 14407320 + Gm28783 lincRNA lincRNA MGP_WSBEiJ_T0023599.1 MGP_WSBEiJ_G0016362.1 mouse_genomes_project 1 197572102 197724432 - MGP_WSBEiJ_P0023599 Syt14 protein_coding protein_coding MGP_WSBEiJ_T0023600.1 MGP_WSBEiJ_G0016362.1 mouse_genomes_project 1 197576856 197724337 - MGP_WSBEiJ_P0023600 Syt14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023601.1 MGP_WSBEiJ_G0016362.1 mouse_genomes_project 1 197578080 197724392 - MGP_WSBEiJ_P0023601 Syt14 protein_coding protein_coding MGP_WSBEiJ_T0023602.1 MGP_WSBEiJ_G0016362.1 mouse_genomes_project 1 197614129 197724319 - Syt14 protein_coding retained_intron MGP_WSBEiJ_T0022980.1 MGP_WSBEiJ_G0016223.1 mouse_genomes_project 1 177870761 177945002 - MGP_WSBEiJ_P0022980 Ifi205 protein_coding protein_coding MGP_WSBEiJ_T0098772.1 MGP_WSBEiJ_G0037435.1 mouse_genomes_project 1 86590053 86590123 - Snord82 snoRNA snoRNA MGP_WSBEiJ_T0000384.1 MGP_WSBEiJ_G0000330.1 mouse_genomes_project 1 23134923 23137797 - TEC TEC MGP_WSBEiJ_T0002868.1 MGP_WSBEiJ_G0002704.1 mouse_genomes_project 1 167582562 167585433 - Gm16587 antisense antisense MGP_WSBEiJ_T0012078.1 MGP_WSBEiJ_G0010208.1 mouse_genomes_project 1 167943751 167944067 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021724.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138794424 138825400 + Kif14 protein_coding retained_intron MGP_WSBEiJ_T0021725.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138796017 138865624 + MGP_WSBEiJ_P0021725 Kif14 protein_coding protein_coding MGP_WSBEiJ_T0021726.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138796017 138861764 + MGP_WSBEiJ_P0021726 Kif14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021727.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138796040 138865624 + MGP_WSBEiJ_P0021727 Kif14 protein_coding protein_coding MGP_WSBEiJ_T0021728.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138796682 138857023 + MGP_WSBEiJ_P0021728 Kif14 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021729.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138797085 138800847 + Kif14 protein_coding retained_intron MGP_WSBEiJ_T0021730.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138805425 138809027 + Kif14 protein_coding processed_transcript MGP_WSBEiJ_T0021731.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138805425 138809027 + Kif14 protein_coding processed_transcript MGP_WSBEiJ_T0021732.1 MGP_WSBEiJ_G0015954.1 mouse_genomes_project 1 138805425 138809027 + MGP_WSBEiJ_P0021732 Kif14 protein_coding protein_coding MGP_WSBEiJ_T0019168.1 MGP_WSBEiJ_G0015434.1 mouse_genomes_project 1 52109798 52122319 + MGP_WSBEiJ_P0019168 Osgepl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019169.1 MGP_WSBEiJ_G0015434.1 mouse_genomes_project 1 52109801 52112777 + Osgepl1 protein_coding processed_transcript MGP_WSBEiJ_T0019170.1 MGP_WSBEiJ_G0015434.1 mouse_genomes_project 1 52109801 52114803 + Osgepl1 protein_coding retained_intron MGP_WSBEiJ_T0019171.1 MGP_WSBEiJ_G0015434.1 mouse_genomes_project 1 52109807 52120209 + MGP_WSBEiJ_P0019171 Osgepl1 protein_coding protein_coding MGP_WSBEiJ_T0019172.1 MGP_WSBEiJ_G0015434.1 mouse_genomes_project 1 52109817 52122312 + MGP_WSBEiJ_P0019172 Osgepl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020354.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86226800 86234673 + Spata3 protein_coding processed_transcript MGP_WSBEiJ_T0020355.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86228677 86239234 + Spata3 protein_coding processed_transcript MGP_WSBEiJ_T0020356.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86231943 86239944 + MGP_WSBEiJ_P0020356 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0020357.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86231944 86234670 + MGP_WSBEiJ_P0020357 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0020358.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86231947 86239944 + MGP_WSBEiJ_P0020358 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0020359.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86231947 86237176 + MGP_WSBEiJ_P0020359 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0020360.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86231947 86234672 + MGP_WSBEiJ_P0020360 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0020361.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86231954 86239907 + MGP_WSBEiJ_P0020361 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0020362.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86231961 86239248 + MGP_WSBEiJ_P0020362 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0020363.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86231962 86234673 + MGP_WSBEiJ_P0020363 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0020364.1 MGP_WSBEiJ_G0015654.1 mouse_genomes_project 1 86232106 86239250 + MGP_WSBEiJ_P0020364 Spata3 protein_coding protein_coding MGP_WSBEiJ_T0005973.1 MGP_WSBEiJ_G0004999.1 mouse_genomes_project 1 198933918 198944531 - 4930503O07Rik lincRNA lincRNA MGP_WSBEiJ_T0002918.1 MGP_WSBEiJ_G0002746.1 mouse_genomes_project 1 194752627 194802271 + Prox1os antisense antisense MGP_WSBEiJ_T0011764.1 MGP_WSBEiJ_G0009894.1 mouse_genomes_project 1 40534240 40535285 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005657.1 MGP_WSBEiJ_G0004748.1 mouse_genomes_project 1 57519048 57526525 + Gm15834 lincRNA lincRNA MGP_WSBEiJ_T0005658.1 MGP_WSBEiJ_G0004748.1 mouse_genomes_project 1 57519052 57533313 + Gm15834 lincRNA lincRNA MGP_WSBEiJ_T0005659.1 MGP_WSBEiJ_G0004748.1 mouse_genomes_project 1 57519055 57539017 + Gm15834 lincRNA lincRNA MGP_WSBEiJ_T0020262.1 MGP_WSBEiJ_G0015634.1 mouse_genomes_project 1 82959394 83023983 + MGP_WSBEiJ_P0020262 Agfg1 protein_coding protein_coding MGP_WSBEiJ_T0020263.1 MGP_WSBEiJ_G0015634.1 mouse_genomes_project 1 82959408 83019183 + MGP_WSBEiJ_P0020263 Agfg1 protein_coding protein_coding MGP_WSBEiJ_T0020264.1 MGP_WSBEiJ_G0015634.1 mouse_genomes_project 1 82959587 83019183 + MGP_WSBEiJ_P0020264 Agfg1 protein_coding protein_coding MGP_WSBEiJ_T0020265.1 MGP_WSBEiJ_G0015634.1 mouse_genomes_project 1 82959589 83019081 + MGP_WSBEiJ_P0020265 Agfg1 protein_coding protein_coding MGP_WSBEiJ_T0020266.1 MGP_WSBEiJ_G0015634.1 mouse_genomes_project 1 82959592 83018322 + MGP_WSBEiJ_P0020266 Agfg1 protein_coding protein_coding MGP_WSBEiJ_T0020267.1 MGP_WSBEiJ_G0015634.1 mouse_genomes_project 1 82959592 83018476 + MGP_WSBEiJ_P0020267 Agfg1 protein_coding protein_coding MGP_WSBEiJ_T0020268.1 MGP_WSBEiJ_G0015634.1 mouse_genomes_project 1 82959652 83017923 + MGP_WSBEiJ_P0020268 Agfg1 protein_coding protein_coding MGP_WSBEiJ_T0020269.1 MGP_WSBEiJ_G0015634.1 mouse_genomes_project 1 82959991 83002916 + MGP_WSBEiJ_P0020269 Agfg1 protein_coding protein_coding MGP_WSBEiJ_T0009379.1 MGP_WSBEiJ_G0007536.1 mouse_genomes_project 1 107695328 107695464 - Mir3473f miRNA miRNA MGP_WSBEiJ_T0098817.1 MGP_WSBEiJ_G0037480.1 mouse_genomes_project 1 166521207 166521329 + Gm22434 snoRNA snoRNA MGP_WSBEiJ_T0097236.1 MGP_WSBEiJ_G0035917.1 mouse_genomes_project 1 50643187 50645686 - Gm28323 sense_intronic sense_intronic MGP_WSBEiJ_T0005946.1 MGP_WSBEiJ_G0004976.1 mouse_genomes_project 1 189419038 189424263 + 4930433J02Rik lincRNA lincRNA MGP_WSBEiJ_T0023669.1 MGP_WSBEiJ_G0016373.1 mouse_genomes_project 1 199781696 199831063 - MGP_WSBEiJ_P0023669 Cd46 protein_coding protein_coding MGP_WSBEiJ_T0023670.1 MGP_WSBEiJ_G0016373.1 mouse_genomes_project 1 199786940 199806171 - Cd46 protein_coding retained_intron MGP_WSBEiJ_T0023671.1 MGP_WSBEiJ_G0016373.1 mouse_genomes_project 1 199787005 199831039 - MGP_WSBEiJ_P0023671 Cd46 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023672.1 MGP_WSBEiJ_G0016373.1 mouse_genomes_project 1 199787028 199821455 - Cd46 protein_coding retained_intron MGP_WSBEiJ_T0000773.1 MGP_WSBEiJ_G0000713.1 mouse_genomes_project 1 199387267 199389123 + TEC TEC MGP_WSBEiJ_T0018384.1 MGP_WSBEiJ_G0015273.1 mouse_genomes_project 1 13917312 13931142 + MGP_WSBEiJ_P0018384 Tmem70 protein_coding protein_coding MGP_WSBEiJ_T0018385.1 MGP_WSBEiJ_G0015273.1 mouse_genomes_project 1 13917315 13930162 + Tmem70 protein_coding processed_transcript MGP_WSBEiJ_T0018386.1 MGP_WSBEiJ_G0015273.1 mouse_genomes_project 1 13917315 13931222 + MGP_WSBEiJ_P0018386 Tmem70 protein_coding protein_coding MGP_WSBEiJ_T0018387.1 MGP_WSBEiJ_G0015273.1 mouse_genomes_project 1 13917341 13917917 + Tmem70 protein_coding processed_transcript MGP_WSBEiJ_T0000646.1 MGP_WSBEiJ_G0000589.1 mouse_genomes_project 1 152253659 152255998 - TEC TEC MGP_WSBEiJ_T0002907.1 MGP_WSBEiJ_G0002736.1 mouse_genomes_project 1 191117798 191119121 + Gm29491 antisense antisense MGP_WSBEiJ_T0002887.1 MGP_WSBEiJ_G0002719.1 mouse_genomes_project 1 175995365 175996365 + Gm37950 antisense antisense MGP_WSBEiJ_T0097253.1 MGP_WSBEiJ_G0035933.1 mouse_genomes_project 1 155669490 155690134 - Gm28792 sense_intronic sense_intronic MGP_WSBEiJ_T0005972.1 MGP_WSBEiJ_G0004998.1 mouse_genomes_project 1 198212912 198215836 - 4631405K08Rik lincRNA lincRNA MGP_WSBEiJ_T0005588.1 MGP_WSBEiJ_G0004700.1 mouse_genomes_project 1 28782308 28873648 - lincRNA lincRNA MGP_WSBEiJ_T0019486.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59598590 59671401 + MGP_WSBEiJ_P0019486 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019487.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59598666 59671401 + MGP_WSBEiJ_P0019487 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019488.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59598666 59667328 + MGP_WSBEiJ_P0019488 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019489.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59598705 59669758 + MGP_WSBEiJ_P0019489 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019490.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59598752 59635065 + Abi2 protein_coding retained_intron MGP_WSBEiJ_T0019491.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59598766 59637577 + MGP_WSBEiJ_P0019491 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019492.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59598774 59667398 + MGP_WSBEiJ_P0019492 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019493.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59598779 59623951 + Abi2 protein_coding retained_intron MGP_WSBEiJ_T0019494.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59627398 59667998 + MGP_WSBEiJ_P0019494 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019495.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59627522 59667160 + MGP_WSBEiJ_P0019495 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019496.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59627527 59667323 + MGP_WSBEiJ_P0019496 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0019497.1 MGP_WSBEiJ_G0015492.1 mouse_genomes_project 1 59629256 59667544 + MGP_WSBEiJ_P0019497 Abi2 protein_coding protein_coding MGP_WSBEiJ_T0022887.1 MGP_WSBEiJ_G0016188.1 mouse_genomes_project 1 175979560 176016452 - MGP_WSBEiJ_P0022887 Atp1a4 protein_coding protein_coding MGP_WSBEiJ_T0022888.1 MGP_WSBEiJ_G0016188.1 mouse_genomes_project 1 176004953 176011979 - Atp1a4 protein_coding processed_transcript MGP_WSBEiJ_T0021713.1 MGP_WSBEiJ_G0015951.1 mouse_genomes_project 1 138582347 138583424 - MGP_WSBEiJ_P0021713 Gpr25 protein_coding protein_coding MGP_WSBEiJ_T0012026.1 MGP_WSBEiJ_G0010156.1 mouse_genomes_project 1 145280778 145281595 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000661.1 MGP_WSBEiJ_G0000604.1 mouse_genomes_project 1 159381850 159382494 - TEC TEC MGP_WSBEiJ_T0023329.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187584710 187606378 - MGP_WSBEiJ_P0023329 Brox protein_coding protein_coding MGP_WSBEiJ_T0023330.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187584712 187606642 - MGP_WSBEiJ_P0023330 Brox protein_coding protein_coding MGP_WSBEiJ_T0023331.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187585427 187606655 - MGP_WSBEiJ_P0023331 Brox protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023332.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187592128 187594542 - Brox protein_coding retained_intron MGP_WSBEiJ_T0023333.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187594485 187601065 - Brox protein_coding retained_intron MGP_WSBEiJ_T0023334.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187594540 187606614 - MGP_WSBEiJ_P0023334 Brox protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023335.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187596100 187600632 - Brox protein_coding retained_intron MGP_WSBEiJ_T0023336.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187599202 187606642 - Brox protein_coding processed_transcript MGP_WSBEiJ_T0023337.1 MGP_WSBEiJ_G0016307.1 mouse_genomes_project 1 187600296 187604212 - MGP_WSBEiJ_P0023337 Brox protein_coding protein_coding MGP_WSBEiJ_T0020379.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369059 86467446 + Armc9 protein_coding retained_intron MGP_WSBEiJ_T0020380.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369063 86432471 + Armc9 protein_coding retained_intron MGP_WSBEiJ_T0020381.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369063 86480980 + Armc9 protein_coding retained_intron MGP_WSBEiJ_T0020382.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369065 86384563 + Armc9 protein_coding retained_intron MGP_WSBEiJ_T0020383.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369077 86398373 + Armc9 protein_coding processed_transcript MGP_WSBEiJ_T0020384.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369077 86498770 + MGP_WSBEiJ_P0020384 Armc9 protein_coding protein_coding MGP_WSBEiJ_T0020385.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369078 86379067 + MGP_WSBEiJ_P0020385 Armc9 protein_coding protein_coding MGP_WSBEiJ_T0020386.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369089 86500284 + MGP_WSBEiJ_P0020386 Armc9 protein_coding protein_coding MGP_WSBEiJ_T0020387.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369094 86473625 + MGP_WSBEiJ_P0020387 Armc9 protein_coding protein_coding MGP_WSBEiJ_T0020388.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86369098 86394330 + Armc9 protein_coding retained_intron MGP_WSBEiJ_T0020389.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86415133 86473528 + MGP_WSBEiJ_P0020389 Armc9 protein_coding protein_coding MGP_WSBEiJ_T0020390.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86421261 86473625 + MGP_WSBEiJ_P0020390 Armc9 protein_coding protein_coding MGP_WSBEiJ_T0020391.1 MGP_WSBEiJ_G0015659.1 mouse_genomes_project 1 86465685 86491422 + MGP_WSBEiJ_P0020391 Armc9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005564.1 MGP_WSBEiJ_G0004681.1 mouse_genomes_project 1 7082131 7084287 - Snhg6 lincRNA lincRNA MGP_WSBEiJ_T0005565.1 MGP_WSBEiJ_G0004681.1 mouse_genomes_project 1 7082195 7083396 - Snhg6 lincRNA lincRNA MGP_WSBEiJ_T0005566.1 MGP_WSBEiJ_G0004681.1 mouse_genomes_project 1 7082197 7084286 - Snhg6 lincRNA lincRNA MGP_WSBEiJ_T0005567.1 MGP_WSBEiJ_G0004681.1 mouse_genomes_project 1 7082197 7084272 - Snhg6 lincRNA lincRNA MGP_WSBEiJ_T0005568.1 MGP_WSBEiJ_G0004681.1 mouse_genomes_project 1 7082197 7083070 - Snhg6 lincRNA lincRNA MGP_WSBEiJ_T0097545.1 MGP_WSBEiJ_G0036208.1 mouse_genomes_project 1 66272415 66272477 + Gm27934 snRNA snRNA MGP_WSBEiJ_T0018848.1 MGP_WSBEiJ_G0015367.1 mouse_genomes_project 1 37151069 37162179 + MGP_WSBEiJ_P0018848 Nms protein_coding protein_coding MGP_WSBEiJ_T0018849.1 MGP_WSBEiJ_G0015367.1 mouse_genomes_project 1 37151123 37160546 + MGP_WSBEiJ_P0018849 Nms protein_coding protein_coding MGP_WSBEiJ_T0000541.1 MGP_WSBEiJ_G0000486.1 mouse_genomes_project 1 96487412 96489147 - TEC TEC MGP_WSBEiJ_T0097593.1 MGP_WSBEiJ_G0036256.1 mouse_genomes_project 1 175477878 175477933 - Gm26412 snRNA snRNA MGP_WSBEiJ_T0100421.1 MGP_WSBEiJ_G0038880.1 mouse_genomes_project 1 133921159 133921940 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002696.1 MGP_WSBEiJ_G0002572.1 mouse_genomes_project 1 14306284 14362716 + antisense antisense MGP_WSBEiJ_T0023025.1 MGP_WSBEiJ_G0016243.1 mouse_genomes_project 1 179622873 179653253 - MGP_WSBEiJ_P0023025 Opn3 protein_coding protein_coding MGP_WSBEiJ_T0005739.1 MGP_WSBEiJ_G0004811.1 mouse_genomes_project 1 89536331 89542431 + 1700067G17Rik lincRNA lincRNA MGP_WSBEiJ_T0002783.1 MGP_WSBEiJ_G0002639.1 mouse_genomes_project 1 88824384 88829828 - 4930453O03Rik antisense antisense MGP_WSBEiJ_T0022547.1 MGP_WSBEiJ_G0016108.1 mouse_genomes_project 1 169597970 169630326 - MGP_WSBEiJ_P0022547 Dusp27 protein_coding protein_coding MGP_WSBEiJ_T0022548.1 MGP_WSBEiJ_G0016108.1 mouse_genomes_project 1 169597975 169630300 - MGP_WSBEiJ_P0022548 Dusp27 protein_coding protein_coding MGP_WSBEiJ_T0011907.1 MGP_WSBEiJ_G0010037.1 mouse_genomes_project 1 91833533 91834253 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022234.1 MGP_WSBEiJ_G0016047.1 mouse_genomes_project 1 163349238 163352685 + 4930523C07Rik protein_coding retained_intron MGP_WSBEiJ_T0022235.1 MGP_WSBEiJ_G0016047.1 mouse_genomes_project 1 163349240 163376916 + 4930523C07Rik protein_coding lincRNA MGP_WSBEiJ_T0022236.1 MGP_WSBEiJ_G0016047.1 mouse_genomes_project 1 163349240 163385587 + 4930523C07Rik protein_coding lincRNA MGP_WSBEiJ_T0022237.1 MGP_WSBEiJ_G0016047.1 mouse_genomes_project 1 163349261 163378158 + 4930523C07Rik protein_coding lincRNA MGP_WSBEiJ_T0022238.1 MGP_WSBEiJ_G0016047.1 mouse_genomes_project 1 163349303 163376885 + 4930523C07Rik protein_coding lincRNA MGP_WSBEiJ_T0022239.1 MGP_WSBEiJ_G0016047.1 mouse_genomes_project 1 163380537 163380837 + MGP_WSBEiJ_P0022239 4930523C07Rik protein_coding protein_coding MGP_WSBEiJ_T0011894.1 MGP_WSBEiJ_G0010024.1 mouse_genomes_project 1 83208960 83209332 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005654.1 MGP_WSBEiJ_G0004745.1 mouse_genomes_project 1 56078124 56080186 + 1700126A01Rik lincRNA lincRNA MGP_WSBEiJ_T0009411.1 MGP_WSBEiJ_G0007568.1 mouse_genomes_project 1 189145237 189145319 - Mir1981 miRNA miRNA MGP_WSBEiJ_T0097547.1 MGP_WSBEiJ_G0036210.1 mouse_genomes_project 1 69567687 69567813 - Gm23879 snRNA snRNA MGP_WSBEiJ_T0020175.1 MGP_WSBEiJ_G0015615.1 mouse_genomes_project 1 78629897 78682657 + MGP_WSBEiJ_P0020175 Acsl3 protein_coding protein_coding MGP_WSBEiJ_T0020176.1 MGP_WSBEiJ_G0015615.1 mouse_genomes_project 1 78629955 78681881 + MGP_WSBEiJ_P0020176 Acsl3 protein_coding protein_coding MGP_WSBEiJ_T0020179.1 MGP_WSBEiJ_G0015615.1 mouse_genomes_project 1 78643373 78663120 + MGP_WSBEiJ_P0020179 Acsl3 protein_coding protein_coding MGP_WSBEiJ_T0020180.1 MGP_WSBEiJ_G0015615.1 mouse_genomes_project 1 78656531 78681329 + MGP_WSBEiJ_P0020180 Acsl3 protein_coding protein_coding MGP_WSBEiJ_T0020181.1 MGP_WSBEiJ_G0015615.1 mouse_genomes_project 1 78656805 78667576 + Acsl3 protein_coding retained_intron MGP_WSBEiJ_T0020182.1 MGP_WSBEiJ_G0015615.1 mouse_genomes_project 1 78665101 78671951 + Acsl3 protein_coding retained_intron MGP_WSBEiJ_T0020183.1 MGP_WSBEiJ_G0015615.1 mouse_genomes_project 1 78671577 78676203 + Acsl3 protein_coding retained_intron MGP_WSBEiJ_T0002735.1 MGP_WSBEiJ_G0002604.1 mouse_genomes_project 1 49971380 50085312 - 9330175M20Rik antisense antisense MGP_WSBEiJ_T0020470.1 MGP_WSBEiJ_G0015679.1 mouse_genomes_project 1 87725744 87734110 - MGP_WSBEiJ_P0020470 Kcnj13 protein_coding protein_coding MGP_WSBEiJ_T0020471.1 MGP_WSBEiJ_G0015679.1 mouse_genomes_project 1 87726383 87728771 - MGP_WSBEiJ_P0020471 Kcnj13 protein_coding protein_coding MGP_WSBEiJ_T0022936.1 MGP_WSBEiJ_G0016200.1 mouse_genomes_project 1 176371835 176377503 - MGP_WSBEiJ_P0022936 Fcrl6 protein_coding protein_coding MGP_WSBEiJ_T0022937.1 MGP_WSBEiJ_G0016200.1 mouse_genomes_project 1 176372726 176377499 - Fcrl6 protein_coding retained_intron MGP_WSBEiJ_T0022938.1 MGP_WSBEiJ_G0016200.1 mouse_genomes_project 1 176373165 176377503 - Fcrl6 protein_coding retained_intron MGP_WSBEiJ_T0021807.1 MGP_WSBEiJ_G0015971.1 mouse_genomes_project 1 146214745 146228415 + MGP_WSBEiJ_P0021807 B3galt2 protein_coding protein_coding MGP_WSBEiJ_T0012020.1 MGP_WSBEiJ_G0010150.1 mouse_genomes_project 1 141569743 141570518 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018097.1 MGP_WSBEiJ_G0015225.1 mouse_genomes_project 1 1535044 1540625 - MGP_WSBEiJ_P0018097 Sox17 protein_coding protein_coding MGP_WSBEiJ_T0018098.1 MGP_WSBEiJ_G0015225.1 mouse_genomes_project 1 1535363 1540962 - MGP_WSBEiJ_P0018098 Sox17 protein_coding protein_coding MGP_WSBEiJ_T0018099.1 MGP_WSBEiJ_G0015225.1 mouse_genomes_project 1 1535503 1541559 - MGP_WSBEiJ_P0018099 Sox17 protein_coding protein_coding MGP_WSBEiJ_T0018100.1 MGP_WSBEiJ_G0015225.1 mouse_genomes_project 1 1535826 1540575 - MGP_WSBEiJ_P0018100 Sox17 protein_coding protein_coding MGP_WSBEiJ_T0018101.1 MGP_WSBEiJ_G0015225.1 mouse_genomes_project 1 1536570 1537718 - Sox17 protein_coding retained_intron MGP_WSBEiJ_T0018102.1 MGP_WSBEiJ_G0015225.1 mouse_genomes_project 1 1536571 1540542 - MGP_WSBEiJ_P0018102 Sox17 protein_coding protein_coding MGP_WSBEiJ_T0018103.1 MGP_WSBEiJ_G0015225.1 mouse_genomes_project 1 1536578 1537849 - MGP_WSBEiJ_P0018103 Sox17 protein_coding protein_coding MGP_WSBEiJ_T0018104.1 MGP_WSBEiJ_G0015225.1 mouse_genomes_project 1 1536580 1540608 - MGP_WSBEiJ_P0018104 Sox17 protein_coding protein_coding MGP_WSBEiJ_T0011817.1 MGP_WSBEiJ_G0009947.1 mouse_genomes_project 1 54047167 54047441 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000640.1 MGP_WSBEiJ_G0000583.1 mouse_genomes_project 1 149828802 149830701 + TEC TEC MGP_WSBEiJ_T0005753.1 MGP_WSBEiJ_G0004825.1 mouse_genomes_project 1 93045567 93050923 + Gm29099 lincRNA lincRNA MGP_WSBEiJ_T0011985.1 MGP_WSBEiJ_G0010115.1 mouse_genomes_project 1 123171015 123171198 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000415.1 MGP_WSBEiJ_G0000360.1 mouse_genomes_project 1 32822780 32825813 + TEC TEC MGP_WSBEiJ_T0018202.1 MGP_WSBEiJ_G0015243.1 mouse_genomes_project 1 6843236 6873963 - MGP_WSBEiJ_P0018202 Vcpip1 protein_coding protein_coding MGP_WSBEiJ_T0011848.1 MGP_WSBEiJ_G0009978.1 mouse_genomes_project 1 62355519 62355765 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011833.1 MGP_WSBEiJ_G0009963.1 mouse_genomes_project 1 59714077 59714305 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009330.1 MGP_WSBEiJ_G0007487.1 mouse_genomes_project 1 32392237 32392316 - Mir5103 miRNA miRNA MGP_WSBEiJ_T0018953.1 MGP_WSBEiJ_G0015393.1 mouse_genomes_project 1 41617246 41662043 - MGP_WSBEiJ_P0018953 Fhl2 protein_coding protein_coding MGP_WSBEiJ_T0019556.1 MGP_WSBEiJ_G0015502.1 mouse_genomes_project 1 62472575 62508819 - MGP_WSBEiJ_P0019556 Gpr1 protein_coding protein_coding MGP_WSBEiJ_T0019557.1 MGP_WSBEiJ_G0015502.1 mouse_genomes_project 1 62500041 62508499 - Gpr1 protein_coding processed_transcript MGP_WSBEiJ_T0021286.1 MGP_WSBEiJ_G0015859.1 mouse_genomes_project 1 133055032 133099465 - MGP_WSBEiJ_P0021286 Mapkapk2 protein_coding protein_coding MGP_WSBEiJ_T0021287.1 MGP_WSBEiJ_G0015859.1 mouse_genomes_project 1 133058221 133074207 - MGP_WSBEiJ_P0021287 Mapkapk2 protein_coding protein_coding MGP_WSBEiJ_T0009321.1 MGP_WSBEiJ_G0007478.1 mouse_genomes_project 1 18023009 18023082 + Mir206 miRNA miRNA MGP_WSBEiJ_T0016486.1 MGP_WSBEiJ_G0014540.1 mouse_genomes_project 1 173516565 173518087 - Gm15852 processed_transcript processed_transcript MGP_WSBEiJ_T0016418.1 MGP_WSBEiJ_G0014524.1 mouse_genomes_project 1 90196348 90234763 - 4933400F21Rik processed_transcript antisense MGP_WSBEiJ_T0016419.1 MGP_WSBEiJ_G0014524.1 mouse_genomes_project 1 90224645 90234749 - 4933400F21Rik processed_transcript antisense MGP_WSBEiJ_T0016420.1 MGP_WSBEiJ_G0014524.1 mouse_genomes_project 1 90228243 90234743 - 4933400F21Rik processed_transcript retained_intron MGP_WSBEiJ_T0009382.1 MGP_WSBEiJ_G0007539.1 mouse_genomes_project 1 133503625 133503789 - Gm24273 miRNA miRNA MGP_WSBEiJ_T0018626.1 MGP_WSBEiJ_G0015330.1 mouse_genomes_project 1 32849108 32874463 + MGP_WSBEiJ_P0018626 Plekhb2 protein_coding protein_coding MGP_WSBEiJ_T0018627.1 MGP_WSBEiJ_G0015330.1 mouse_genomes_project 1 32849124 32880085 + MGP_WSBEiJ_P0018627 Plekhb2 protein_coding protein_coding MGP_WSBEiJ_T0018628.1 MGP_WSBEiJ_G0015330.1 mouse_genomes_project 1 32852381 32863994 + MGP_WSBEiJ_P0018628 Plekhb2 protein_coding protein_coding MGP_WSBEiJ_T0018629.1 MGP_WSBEiJ_G0015330.1 mouse_genomes_project 1 32878159 32880082 + Plekhb2 protein_coding processed_transcript MGP_WSBEiJ_T0005583.1 MGP_WSBEiJ_G0004696.1 mouse_genomes_project 1 22462628 22464396 - Gm28237 lincRNA lincRNA MGP_WSBEiJ_T0005584.1 MGP_WSBEiJ_G0004696.1 mouse_genomes_project 1 22463415 22464579 - Gm28237 lincRNA lincRNA MGP_WSBEiJ_T0002850.1 MGP_WSBEiJ_G0002690.1 mouse_genomes_project 1 159395531 159397009 + 4930518J20Rik antisense antisense MGP_WSBEiJ_T0022119.1 MGP_WSBEiJ_G0016030.1 mouse_genomes_project 1 159402820 159420607 + MGP_WSBEiJ_P0022119 Nphs2 protein_coding protein_coding MGP_WSBEiJ_T0022120.1 MGP_WSBEiJ_G0016030.1 mouse_genomes_project 1 159403136 159419003 + MGP_WSBEiJ_P0022120 Nphs2 protein_coding protein_coding MGP_WSBEiJ_T0097602.1 MGP_WSBEiJ_G0036265.1 mouse_genomes_project 1 186097104 186097198 - Gm23690 snRNA snRNA MGP_WSBEiJ_T0098819.1 MGP_WSBEiJ_G0037482.1 mouse_genomes_project 1 169055748 169055875 - Gm23208 snoRNA snoRNA MGP_WSBEiJ_T0011888.1 MGP_WSBEiJ_G0010018.1 mouse_genomes_project 1 80985073 80985542 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000769.1 MGP_WSBEiJ_G0000709.1 mouse_genomes_project 1 197954306 197956527 - TEC TEC MGP_WSBEiJ_T0005649.1 MGP_WSBEiJ_G0004742.1 mouse_genomes_project 1 54844361 54892012 + 9130227L01Rik lincRNA lincRNA MGP_WSBEiJ_T0005650.1 MGP_WSBEiJ_G0004742.1 mouse_genomes_project 1 54878045 54892242 + 9130227L01Rik lincRNA lincRNA MGP_WSBEiJ_T0000670.1 MGP_WSBEiJ_G0000613.1 mouse_genomes_project 1 161141700 161356840 + TEC TEC MGP_WSBEiJ_T0020564.1 MGP_WSBEiJ_G0015700.1 mouse_genomes_project 1 90485639 90488853 - MGP_WSBEiJ_P0020564 Gbx2 protein_coding protein_coding MGP_WSBEiJ_T0020565.1 MGP_WSBEiJ_G0015700.1 mouse_genomes_project 1 90485649 90486869 - Gbx2 protein_coding retained_intron MGP_WSBEiJ_T0005589.1 MGP_WSBEiJ_G0004701.1 mouse_genomes_project 1 28806730 28808954 + Gm28644 lincRNA lincRNA MGP_WSBEiJ_T0000456.1 MGP_WSBEiJ_G0000401.1 mouse_genomes_project 1 59539694 59540737 + TEC TEC MGP_WSBEiJ_T0022717.1 MGP_WSBEiJ_G0016155.1 mouse_genomes_project 1 174886199 174890861 - MGP_WSBEiJ_P0022717 Fcer1g protein_coding protein_coding MGP_WSBEiJ_T0022718.1 MGP_WSBEiJ_G0016155.1 mouse_genomes_project 1 174886206 174890803 - MGP_WSBEiJ_P0022718 Fcer1g protein_coding protein_coding MGP_WSBEiJ_T0022719.1 MGP_WSBEiJ_G0016155.1 mouse_genomes_project 1 174887684 174890835 - Fcer1g protein_coding retained_intron MGP_WSBEiJ_T0098750.1 MGP_WSBEiJ_G0037413.1 mouse_genomes_project 1 44245222 44245353 + Gm23974 snoRNA snoRNA MGP_WSBEiJ_T0022825.1 MGP_WSBEiJ_G0016176.1 mouse_genomes_project 1 175516075 175552201 + MGP_WSBEiJ_P0022825 Slamf1 protein_coding protein_coding MGP_WSBEiJ_T0022826.1 MGP_WSBEiJ_G0016176.1 mouse_genomes_project 1 175516103 175546904 + Slamf1 protein_coding retained_intron MGP_WSBEiJ_T0022827.1 MGP_WSBEiJ_G0016176.1 mouse_genomes_project 1 175522861 175550639 + MGP_WSBEiJ_P0022827 Slamf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0005821.1 MGP_WSBEiJ_G0004880.1 mouse_genomes_project 1 136624301 136628279 + Platr1 lincRNA lincRNA MGP_WSBEiJ_T0020061.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75144130 75153877 - MGP_WSBEiJ_P0020061 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020062.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75144130 75153899 - MGP_WSBEiJ_P0020062 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020063.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75144174 75153233 - MGP_WSBEiJ_P0020063 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020064.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75144799 75153185 - MGP_WSBEiJ_P0020064 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020065.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75144799 75153389 - MGP_WSBEiJ_P0020065 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020066.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75145417 75149994 - Dnpep protein_coding retained_intron MGP_WSBEiJ_T0020067.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75148702 75153649 - Dnpep protein_coding retained_intron MGP_WSBEiJ_T0020068.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75150598 75153043 - MGP_WSBEiJ_P0020068 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020069.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75150601 75153261 - MGP_WSBEiJ_P0020069 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020070.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75151436 75153553 - MGP_WSBEiJ_P0020070 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020071.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75152218 75153687 - MGP_WSBEiJ_P0020071 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020072.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75152586 75153612 - Dnpep protein_coding retained_intron MGP_WSBEiJ_T0020073.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75152609 75154230 - MGP_WSBEiJ_P0020073 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0020074.1 MGP_WSBEiJ_G0015599.1 mouse_genomes_project 1 75152793 75153622 - MGP_WSBEiJ_P0020074 Dnpep protein_coding protein_coding MGP_WSBEiJ_T0022488.1 MGP_WSBEiJ_G0016101.1 mouse_genomes_project 1 168947550 168951543 + Mpc2 protein_coding retained_intron MGP_WSBEiJ_T0022489.1 MGP_WSBEiJ_G0016101.1 mouse_genomes_project 1 168947950 168968069 + MGP_WSBEiJ_P0022489 Mpc2 protein_coding protein_coding MGP_WSBEiJ_T0022490.1 MGP_WSBEiJ_G0016101.1 mouse_genomes_project 1 168948137 168964545 + Mpc2 protein_coding retained_intron MGP_WSBEiJ_T0022491.1 MGP_WSBEiJ_G0016101.1 mouse_genomes_project 1 168948278 168967963 + MGP_WSBEiJ_P0022491 Mpc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022492.1 MGP_WSBEiJ_G0016101.1 mouse_genomes_project 1 168964992 168967974 + Mpc2 protein_coding processed_transcript MGP_WSBEiJ_T0000330.1 MGP_WSBEiJ_G0000278.1 mouse_genomes_project 1 1825472 1826713 - TEC TEC MGP_WSBEiJ_T0002809.1 MGP_WSBEiJ_G0002658.1 mouse_genomes_project 1 129749072 129756998 + Gm28800 antisense antisense MGP_WSBEiJ_T0009323.1 MGP_WSBEiJ_G0007480.1 mouse_genomes_project 1 20729545 20729616 + Mir30a miRNA miRNA MGP_WSBEiJ_T0002821.1 MGP_WSBEiJ_G0002668.1 mouse_genomes_project 1 135341096 135361654 - Gm19461 antisense antisense MGP_WSBEiJ_T0002822.1 MGP_WSBEiJ_G0002668.1 mouse_genomes_project 1 135341906 135347815 - Gm19461 antisense antisense MGP_WSBEiJ_T0002823.1 MGP_WSBEiJ_G0002668.1 mouse_genomes_project 1 135344601 135344992 - Gm19461 antisense antisense MGP_WSBEiJ_T0002824.1 MGP_WSBEiJ_G0002668.1 mouse_genomes_project 1 135344982 135347049 - Gm19461 antisense antisense MGP_WSBEiJ_T0002825.1 MGP_WSBEiJ_G0002668.1 mouse_genomes_project 1 135347237 135349361 - Gm19461 antisense antisense MGP_WSBEiJ_T0000326.1 MGP_WSBEiJ_G0000274.1 mouse_genomes_project 1 623387 627935 - TEC TEC MGP_WSBEiJ_T0100401.1 MGP_WSBEiJ_G0038860.1 mouse_genomes_project 1 88507404 88507619 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0018105.1 MGP_WSBEiJ_G0015226.1 mouse_genomes_project 1 1820680 1835544 - MGP_WSBEiJ_P0018105 Mrpl15 protein_coding protein_coding MGP_WSBEiJ_T0018106.1 MGP_WSBEiJ_G0015226.1 mouse_genomes_project 1 1820685 1835573 - MGP_WSBEiJ_P0018106 Mrpl15 protein_coding protein_coding MGP_WSBEiJ_T0018107.1 MGP_WSBEiJ_G0015226.1 mouse_genomes_project 1 1821860 1835532 - MGP_WSBEiJ_P0018107 Mrpl15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018108.1 MGP_WSBEiJ_G0015226.1 mouse_genomes_project 1 1823812 1835573 - Mrpl15 protein_coding processed_transcript MGP_WSBEiJ_T0018109.1 MGP_WSBEiJ_G0015226.1 mouse_genomes_project 1 1827468 1833105 - Mrpl15 protein_coding retained_intron MGP_WSBEiJ_T0018110.1 MGP_WSBEiJ_G0015226.1 mouse_genomes_project 1 1828723 1835573 - MGP_WSBEiJ_P0018110 Mrpl15 protein_coding protein_coding MGP_WSBEiJ_T0018111.1 MGP_WSBEiJ_G0015226.1 mouse_genomes_project 1 1832111 1835526 - Mrpl15 protein_coding retained_intron MGP_WSBEiJ_T0098773.1 MGP_WSBEiJ_G0037436.1 mouse_genomes_project 1 95423787 95423856 - Gm23389 snoRNA snoRNA MGP_WSBEiJ_T0022031.1 MGP_WSBEiJ_G0016014.1 mouse_genomes_project 1 156938909 156949722 + MGP_WSBEiJ_P0022031 Glul protein_coding protein_coding MGP_WSBEiJ_T0022032.1 MGP_WSBEiJ_G0016014.1 mouse_genomes_project 1 156939571 156946117 + MGP_WSBEiJ_P0022032 Glul protein_coding protein_coding MGP_WSBEiJ_T0022033.1 MGP_WSBEiJ_G0016014.1 mouse_genomes_project 1 156940081 156945333 + MGP_WSBEiJ_P0022033 Glul protein_coding protein_coding MGP_WSBEiJ_T0022034.1 MGP_WSBEiJ_G0016014.1 mouse_genomes_project 1 156942781 156946006 + Glul protein_coding processed_transcript MGP_WSBEiJ_T0022035.1 MGP_WSBEiJ_G0016014.1 mouse_genomes_project 1 156945019 156946093 + Glul protein_coding retained_intron MGP_WSBEiJ_T0022653.1 MGP_WSBEiJ_G0016140.1 mouse_genomes_project 1 174327600 174507624 - MGP_WSBEiJ_P0022653 Atf6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022654.1 MGP_WSBEiJ_G0016140.1 mouse_genomes_project 1 174421713 174423803 - Atf6 protein_coding retained_intron MGP_WSBEiJ_T0002797.1 MGP_WSBEiJ_G0002651.1 mouse_genomes_project 1 106019746 106020651 - Gm15699 antisense antisense MGP_WSBEiJ_T0009414.1 MGP_WSBEiJ_G0007571.1 mouse_genomes_project 1 189655747 189655859 + Mir215 miRNA miRNA MGP_WSBEiJ_T0022977.1 MGP_WSBEiJ_G0016221.1 mouse_genomes_project 1 177627680 177635414 - protein_coding processed_transcript MGP_WSBEiJ_T0011818.1 MGP_WSBEiJ_G0009948.1 mouse_genomes_project 1 54047173 54047480 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005909.1 MGP_WSBEiJ_G0004951.1 mouse_genomes_project 1 181592275 181597786 - Gm37280 lincRNA lincRNA MGP_WSBEiJ_T0011992.1 MGP_WSBEiJ_G0010122.1 mouse_genomes_project 1 124864669 124864912 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009334.1 MGP_WSBEiJ_G0007491.1 mouse_genomes_project 1 34741003 34741078 + Gm24133 miRNA miRNA MGP_WSBEiJ_T0021618.1 MGP_WSBEiJ_G0015934.1 mouse_genomes_project 1 137603186 137650915 + MGP_WSBEiJ_P0021618 Lmod1 protein_coding protein_coding MGP_WSBEiJ_T0016385.1 MGP_WSBEiJ_G0014509.1 mouse_genomes_project 1 32431828 32433372 - Gm28417 processed_transcript retained_intron MGP_WSBEiJ_T0016386.1 MGP_WSBEiJ_G0014509.1 mouse_genomes_project 1 32433092 32436081 - Gm28417 processed_transcript antisense MGP_WSBEiJ_T0016387.1 MGP_WSBEiJ_G0014509.1 mouse_genomes_project 1 32434457 32436045 - Gm28417 processed_transcript antisense MGP_WSBEiJ_T0011738.1 MGP_WSBEiJ_G0009868.1 mouse_genomes_project 1 31302444 31304698 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019603.1 MGP_WSBEiJ_G0015513.1 mouse_genomes_project 1 64070137 64077327 - MGP_WSBEiJ_P0019603 Fzd5 protein_coding protein_coding MGP_WSBEiJ_T0019604.1 MGP_WSBEiJ_G0015513.1 mouse_genomes_project 1 64074044 64077325 - MGP_WSBEiJ_P0019604 Fzd5 protein_coding protein_coding MGP_WSBEiJ_T0000394.1 MGP_WSBEiJ_G0000340.1 mouse_genomes_project 1 23344591 23345609 - TEC TEC MGP_WSBEiJ_T0011834.1 MGP_WSBEiJ_G0009964.1 mouse_genomes_project 1 59728242 59728659 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000360.1 MGP_WSBEiJ_G0000308.1 mouse_genomes_project 1 11443036 11445185 - TEC TEC MGP_WSBEiJ_T0000423.1 MGP_WSBEiJ_G0000368.1 mouse_genomes_project 1 35811572 35813429 + TEC TEC MGP_WSBEiJ_T0020114.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75316778 75324703 - Obsl1 protein_coding retained_intron MGP_WSBEiJ_T0020119.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75323294 75345312 - MGP_WSBEiJ_P0020119 Obsl1 protein_coding protein_coding MGP_WSBEiJ_T0020120.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75324320 75325272 - Obsl1 protein_coding retained_intron MGP_WSBEiJ_T0020121.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75324692 75325548 - Obsl1 protein_coding retained_intron MGP_WSBEiJ_T0020122.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75328003 75344592 - MGP_WSBEiJ_P0020122 Obsl1 protein_coding protein_coding MGP_WSBEiJ_T0020123.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75328318 75330537 - MGP_WSBEiJ_P0020123 Obsl1 protein_coding protein_coding MGP_WSBEiJ_T0020124.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75328438 75329281 - Obsl1 protein_coding retained_intron MGP_WSBEiJ_T0020125.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75328827 75330101 - Obsl1 protein_coding processed_transcript MGP_WSBEiJ_T0020126.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75329864 75330511 - Obsl1 protein_coding retained_intron MGP_WSBEiJ_T0020127.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75335297 75345312 - MGP_WSBEiJ_P0020127 Obsl1 protein_coding protein_coding MGP_WSBEiJ_T0020128.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75335298 75342631 - Obsl1 protein_coding retained_intron MGP_WSBEiJ_T0020129.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75340632 75345403 - Obsl1 protein_coding retained_intron MGP_WSBEiJ_T0020130.1 MGP_WSBEiJ_G0015605.1 mouse_genomes_project 1 75340632 75345312 - Obsl1 protein_coding retained_intron MGP_WSBEiJ_T0019286.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56940189 56955182 - MGP_WSBEiJ_P0019286 Kctd18 protein_coding protein_coding MGP_WSBEiJ_T0019287.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56940336 56955226 - MGP_WSBEiJ_P0019287 Kctd18 protein_coding protein_coding MGP_WSBEiJ_T0019288.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56940338 56955151 - MGP_WSBEiJ_P0019288 Kctd18 protein_coding unknown_likely_coding MGP_WSBEiJ_T0019289.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56940341 56954613 - MGP_WSBEiJ_P0019289 Kctd18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019290.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56941160 57002802 - MGP_WSBEiJ_P0019290 Kctd18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019291.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56941668 56955146 - MGP_WSBEiJ_P0019291 Kctd18 protein_coding protein_coding MGP_WSBEiJ_T0019292.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56941780 56948536 - Kctd18 protein_coding retained_intron MGP_WSBEiJ_T0019293.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56941808 56947191 - Kctd18 protein_coding retained_intron MGP_WSBEiJ_T0019294.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56945142 56955150 - Kctd18 protein_coding retained_intron MGP_WSBEiJ_T0019295.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56946246 56948070 - Kctd18 protein_coding retained_intron MGP_WSBEiJ_T0019296.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56948654 56955177 - Kctd18 protein_coding retained_intron MGP_WSBEiJ_T0019297.1 MGP_WSBEiJ_G0015458.1 mouse_genomes_project 1 56948690 56955177 - Kctd18 protein_coding retained_intron MGP_WSBEiJ_T0021427.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135029173 135097328 - MGP_WSBEiJ_P0021427 Mdm4 protein_coding protein_coding MGP_WSBEiJ_T0021428.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135031342 135043309 - Mdm4 protein_coding processed_transcript MGP_WSBEiJ_T0021429.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135062013 135097344 - MGP_WSBEiJ_P0021429 Mdm4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021430.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135062140 135097346 - MGP_WSBEiJ_P0021430 Mdm4 protein_coding protein_coding MGP_WSBEiJ_T0021431.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135067866 135090784 - Mdm4 protein_coding processed_transcript MGP_WSBEiJ_T0021432.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135067869 135075975 - Mdm4 protein_coding retained_intron MGP_WSBEiJ_T0021433.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135070694 135072644 - Mdm4 protein_coding retained_intron MGP_WSBEiJ_T0021434.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135072392 135075778 - Mdm4 protein_coding retained_intron MGP_WSBEiJ_T0021435.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135080755 135097320 - Mdm4 protein_coding retained_intron MGP_WSBEiJ_T0021436.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135080809 135104388 - MGP_WSBEiJ_P0021436 Mdm4 protein_coding protein_coding MGP_WSBEiJ_T0021437.1 MGP_WSBEiJ_G0015889.1 mouse_genomes_project 1 135089626 135097328 - Mdm4 protein_coding retained_intron MGP_WSBEiJ_T0011711.1 MGP_WSBEiJ_G0009841.1 mouse_genomes_project 1 20184123 20184925 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011956.1 MGP_WSBEiJ_G0010086.1 mouse_genomes_project 1 113366982 113367547 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009400.1 MGP_WSBEiJ_G0007557.1 mouse_genomes_project 1 166081168 166081231 - Gm27616 miRNA miRNA MGP_WSBEiJ_T0005904.1 MGP_WSBEiJ_G0004946.1 mouse_genomes_project 1 175085429 175099790 - Gm26641 lincRNA lincRNA MGP_WSBEiJ_T0022408.1 MGP_WSBEiJ_G0016079.1 mouse_genomes_project 1 166798377 166817053 - MGP_WSBEiJ_P0022408 Gorab protein_coding protein_coding MGP_WSBEiJ_T0022409.1 MGP_WSBEiJ_G0016079.1 mouse_genomes_project 1 166798381 166817040 - MGP_WSBEiJ_P0022409 Gorab protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022410.1 MGP_WSBEiJ_G0016079.1 mouse_genomes_project 1 166807803 166816995 - Gorab protein_coding retained_intron MGP_WSBEiJ_T0002930.1 MGP_WSBEiJ_G0002752.1 mouse_genomes_project 1 196746024 196753288 + Gm26879 antisense antisense MGP_WSBEiJ_T0012050.1 MGP_WSBEiJ_G0010180.1 mouse_genomes_project 1 154422244 154422485 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018859.1 MGP_WSBEiJ_G0015371.1 mouse_genomes_project 1 37603016 37718474 - MGP_WSBEiJ_P0018859 Tbc1d8 protein_coding protein_coding MGP_WSBEiJ_T0018860.1 MGP_WSBEiJ_G0015371.1 mouse_genomes_project 1 37603388 37603966 - MGP_WSBEiJ_P0018860 Tbc1d8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018861.1 MGP_WSBEiJ_G0015371.1 mouse_genomes_project 1 37603828 37718380 - MGP_WSBEiJ_P0018861 Tbc1d8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018862.1 MGP_WSBEiJ_G0015371.1 mouse_genomes_project 1 37604820 37718419 - MGP_WSBEiJ_P0018862 Tbc1d8 protein_coding protein_coding MGP_WSBEiJ_T0018863.1 MGP_WSBEiJ_G0015371.1 mouse_genomes_project 1 37622769 37624205 - Tbc1d8 protein_coding retained_intron MGP_WSBEiJ_T0000618.1 MGP_WSBEiJ_G0000562.1 mouse_genomes_project 1 140332551 140334543 + TEC TEC MGP_WSBEiJ_T0019446.1 MGP_WSBEiJ_G0015485.1 mouse_genomes_project 1 58905659 59025806 + MGP_WSBEiJ_P0019446 Bmpr2 protein_coding protein_coding MGP_WSBEiJ_T0019447.1 MGP_WSBEiJ_G0015485.1 mouse_genomes_project 1 58997667 58999353 + Bmpr2 protein_coding retained_intron MGP_WSBEiJ_T0019448.1 MGP_WSBEiJ_G0015485.1 mouse_genomes_project 1 58998479 59003188 + Bmpr2 protein_coding retained_intron MGP_WSBEiJ_T0005679.1 MGP_WSBEiJ_G0004765.1 mouse_genomes_project 1 63511703 63630673 - Gm28981 lincRNA lincRNA MGP_WSBEiJ_T0019772.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72352598 72398619 + Smarcal1 protein_coding retained_intron MGP_WSBEiJ_T0019773.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72352598 72368745 + Smarcal1 protein_coding retained_intron MGP_WSBEiJ_T0019774.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72352598 72365596 + Smarcal1 protein_coding retained_intron MGP_WSBEiJ_T0019775.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72352598 72404835 + MGP_WSBEiJ_P0019775 Smarcal1 protein_coding protein_coding MGP_WSBEiJ_T0019776.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72352598 72355339 + MGP_WSBEiJ_P0019776 Smarcal1 protein_coding protein_coding MGP_WSBEiJ_T0019777.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72352598 72365156 + MGP_WSBEiJ_P0019777 Smarcal1 protein_coding protein_coding MGP_WSBEiJ_T0019778.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72352962 72404835 + MGP_WSBEiJ_P0019778 Smarcal1 protein_coding protein_coding MGP_WSBEiJ_T0019779.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72354985 72398619 + Smarcal1 protein_coding retained_intron MGP_WSBEiJ_T0019780.1 MGP_WSBEiJ_G0015548.1 mouse_genomes_project 1 72387009 72400001 + Smarcal1 protein_coding retained_intron MGP_WSBEiJ_T0012044.1 MGP_WSBEiJ_G0010174.1 mouse_genomes_project 1 153110859 153111216 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018853.1 MGP_WSBEiJ_G0015369.1 mouse_genomes_project 1 37415083 37513802 + MGP_WSBEiJ_P0018853 Npas2 protein_coding protein_coding MGP_WSBEiJ_T0018854.1 MGP_WSBEiJ_G0015369.1 mouse_genomes_project 1 37415564 37593480 + MGP_WSBEiJ_P0018854 Npas2 protein_coding protein_coding MGP_WSBEiJ_T0018855.1 MGP_WSBEiJ_G0015369.1 mouse_genomes_project 1 37571438 37575290 + Npas2 protein_coding processed_transcript MGP_WSBEiJ_T0022944.1 MGP_WSBEiJ_G0016205.1 mouse_genomes_project 1 176914578 176922419 - MGP_WSBEiJ_P0022944 Olfr1408 protein_coding protein_coding MGP_WSBEiJ_T0022945.1 MGP_WSBEiJ_G0016205.1 mouse_genomes_project 1 176914578 176928033 - MGP_WSBEiJ_P0022945 Olfr1408 protein_coding protein_coding MGP_WSBEiJ_T0011697.1 MGP_WSBEiJ_G0009827.1 mouse_genomes_project 1 15299225 15303312 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021508.1 MGP_WSBEiJ_G0015907.1 mouse_genomes_project 1 136069464 136080573 - MGP_WSBEiJ_P0021508 Prelp protein_coding protein_coding MGP_WSBEiJ_T0021509.1 MGP_WSBEiJ_G0015907.1 mouse_genomes_project 1 136071880 136080570 - Prelp protein_coding processed_transcript MGP_WSBEiJ_T0000579.1 MGP_WSBEiJ_G0000524.1 mouse_genomes_project 1 129014493 129015887 + TEC TEC MGP_WSBEiJ_T0011775.1 MGP_WSBEiJ_G0009905.1 mouse_genomes_project 1 43356247 43356812 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002889.1 MGP_WSBEiJ_G0002721.1 mouse_genomes_project 1 180738091 180743026 + Gm36992 antisense antisense MGP_WSBEiJ_T0097579.1 MGP_WSBEiJ_G0036242.1 mouse_genomes_project 1 142114676 142114780 + Gm26271 snRNA snRNA MGP_WSBEiJ_T0019071.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50516086 50684156 - MGP_WSBEiJ_P0019071 Myo1b protein_coding protein_coding MGP_WSBEiJ_T0019072.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50516302 50684026 - MGP_WSBEiJ_P0019072 Myo1b protein_coding protein_coding MGP_WSBEiJ_T0019073.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50516309 50675467 - MGP_WSBEiJ_P0019073 Myo1b protein_coding protein_coding MGP_WSBEiJ_T0019074.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50516314 50684013 - MGP_WSBEiJ_P0019074 Myo1b protein_coding protein_coding MGP_WSBEiJ_T0019075.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50527732 50531859 - Myo1b protein_coding retained_intron MGP_WSBEiJ_T0019076.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50529910 50538275 - Myo1b protein_coding processed_transcript MGP_WSBEiJ_T0019077.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50529978 50534782 - Myo1b protein_coding retained_intron MGP_WSBEiJ_T0019078.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50534265 50543830 - Myo1b protein_coding processed_transcript MGP_WSBEiJ_T0019079.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50543786 50562763 - Myo1b protein_coding processed_transcript MGP_WSBEiJ_T0019080.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50547109 50549620 - Myo1b protein_coding retained_intron MGP_WSBEiJ_T0019081.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50564974 50662661 - MGP_WSBEiJ_P0019081 Myo1b protein_coding protein_coding MGP_WSBEiJ_T0019082.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50566658 50587618 - Myo1b protein_coding processed_transcript MGP_WSBEiJ_T0019083.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50577751 50683997 - Myo1b protein_coding retained_intron MGP_WSBEiJ_T0019084.1 MGP_WSBEiJ_G0015419.1 mouse_genomes_project 1 50631539 50684006 - Myo1b protein_coding retained_intron MGP_WSBEiJ_T0100440.1 MGP_WSBEiJ_G0038899.1 mouse_genomes_project 1 182053079 182053323 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0023452.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193738146 193883625 - MGP_WSBEiJ_P0023452 Kcnk2 protein_coding protein_coding MGP_WSBEiJ_T0023453.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193738153 193938871 - MGP_WSBEiJ_P0023453 Kcnk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023454.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193738153 193883265 - MGP_WSBEiJ_P0023454 Kcnk2 protein_coding protein_coding MGP_WSBEiJ_T0023455.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193739962 193938816 - MGP_WSBEiJ_P0023455 Kcnk2 protein_coding protein_coding MGP_WSBEiJ_T0023456.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193739971 193938811 - MGP_WSBEiJ_P0023456 Kcnk2 protein_coding protein_coding MGP_WSBEiJ_T0023457.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193740008 193882788 - MGP_WSBEiJ_P0023457 Kcnk2 protein_coding protein_coding MGP_WSBEiJ_T0023458.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193740008 193883140 - MGP_WSBEiJ_P0023458 Kcnk2 protein_coding protein_coding MGP_WSBEiJ_T0023459.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193740243 193745608 - Kcnk2 protein_coding processed_transcript MGP_WSBEiJ_T0023460.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193740280 193774492 - Kcnk2 protein_coding processed_transcript MGP_WSBEiJ_T0023461.1 MGP_WSBEiJ_G0016333.1 mouse_genomes_project 1 193878492 193886413 - Kcnk2 protein_coding processed_transcript MGP_WSBEiJ_T0020483.1 MGP_WSBEiJ_G0015681.1 mouse_genomes_project 1 87815168 87850530 - MGP_WSBEiJ_P0020483 Ngef protein_coding protein_coding MGP_WSBEiJ_T0020484.1 MGP_WSBEiJ_G0015681.1 mouse_genomes_project 1 87815168 87917353 - MGP_WSBEiJ_P0020484 Ngef protein_coding protein_coding MGP_WSBEiJ_T0020485.1 MGP_WSBEiJ_G0015681.1 mouse_genomes_project 1 87817019 87824506 - MGP_WSBEiJ_P0020485 Ngef protein_coding protein_coding MGP_WSBEiJ_T0020486.1 MGP_WSBEiJ_G0015681.1 mouse_genomes_project 1 87818063 87824546 - Ngef protein_coding retained_intron MGP_WSBEiJ_T0012106.1 MGP_WSBEiJ_G0010236.1 mouse_genomes_project 1 180870626 180871461 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096882.1 MGP_WSBEiJ_G0035563.1 mouse_genomes_project 1 90902922 90903029 + Gm27648 rRNA rRNA MGP_WSBEiJ_T0011594.1 MGP_WSBEiJ_G0009749.1 mouse_genomes_project 1 178083338 178084388 + MGP_WSBEiJ_P0011594 Olfr421-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0000458.1 MGP_WSBEiJ_G0000403.1 mouse_genomes_project 1 59971808 59977276 + TEC TEC MGP_WSBEiJ_T0019769.1 MGP_WSBEiJ_G0015546.1 mouse_genomes_project 1 72070064 72163653 + MGP_WSBEiJ_P0019769 Xrcc5 protein_coding protein_coding MGP_WSBEiJ_T0019770.1 MGP_WSBEiJ_G0015546.1 mouse_genomes_project 1 72070100 72163648 + MGP_WSBEiJ_P0019770 Xrcc5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0005562.1 MGP_WSBEiJ_G0004679.1 mouse_genomes_project 1 4571420 4593163 + Gm30414 lincRNA lincRNA MGP_WSBEiJ_T0005561.1 MGP_WSBEiJ_G0004678.1 mouse_genomes_project 1 1619578 1622699 - Gm37323 lincRNA lincRNA MGP_WSBEiJ_T0000702.1 MGP_WSBEiJ_G0000645.1 mouse_genomes_project 1 169350755 169351317 - TEC TEC MGP_WSBEiJ_T0098771.1 MGP_WSBEiJ_G0037434.1 mouse_genomes_project 1 86585803 86585883 - Gm24148 snoRNA snoRNA MGP_WSBEiJ_T0012087.1 MGP_WSBEiJ_G0010217.1 mouse_genomes_project 1 170664838 170665247 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022971.1 MGP_WSBEiJ_G0016217.1 mouse_genomes_project 1 177547579 177556813 - MGP_WSBEiJ_P0022971 AI607873 protein_coding unknown_likely_coding MGP_WSBEiJ_T0018787.1 MGP_WSBEiJ_G0015356.1 mouse_genomes_project 1 36030381 36033985 + MGP_WSBEiJ_P0018787 Lipt1 protein_coding protein_coding MGP_WSBEiJ_T0018788.1 MGP_WSBEiJ_G0015356.1 mouse_genomes_project 1 36030848 36034870 + MGP_WSBEiJ_P0018788 Lipt1 protein_coding protein_coding MGP_WSBEiJ_T0018789.1 MGP_WSBEiJ_G0015356.1 mouse_genomes_project 1 36031016 36034102 + MGP_WSBEiJ_P0018789 Lipt1 protein_coding protein_coding MGP_WSBEiJ_T0018790.1 MGP_WSBEiJ_G0015356.1 mouse_genomes_project 1 36031204 36034196 + MGP_WSBEiJ_P0018790 Lipt1 protein_coding protein_coding MGP_WSBEiJ_T0002820.1 MGP_WSBEiJ_G0002667.1 mouse_genomes_project 1 135126891 135145215 - Gm28609 antisense antisense MGP_WSBEiJ_T0000616.1 MGP_WSBEiJ_G0000560.1 mouse_genomes_project 1 140208302 140208597 + TEC TEC MGP_WSBEiJ_T0005675.1 MGP_WSBEiJ_G0004762.1 mouse_genomes_project 1 62565442 62571711 - Gm11608 lincRNA lincRNA MGP_WSBEiJ_T0005676.1 MGP_WSBEiJ_G0004762.1 mouse_genomes_project 1 62565442 62571716 - Gm11608 lincRNA lincRNA MGP_WSBEiJ_T0020012.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75045654 75050424 + MGP_WSBEiJ_P0020012 Stk16 protein_coding protein_coding MGP_WSBEiJ_T0020013.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75045662 75046688 + Stk16 protein_coding retained_intron MGP_WSBEiJ_T0020014.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75045664 75047052 + MGP_WSBEiJ_P0020014 Stk16 protein_coding protein_coding MGP_WSBEiJ_T0020015.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75045686 75049060 + MGP_WSBEiJ_P0020015 Stk16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020016.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75045690 75047051 + MGP_WSBEiJ_P0020016 Stk16 protein_coding protein_coding MGP_WSBEiJ_T0020017.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75045692 75049057 + Stk16 protein_coding retained_intron MGP_WSBEiJ_T0020018.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75045696 75047955 + Stk16 protein_coding processed_transcript MGP_WSBEiJ_T0020019.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75045870 75048046 + MGP_WSBEiJ_P0020019 Stk16 protein_coding protein_coding MGP_WSBEiJ_T0020020.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75046056 75048769 + MGP_WSBEiJ_P0020020 Stk16 protein_coding protein_coding MGP_WSBEiJ_T0020021.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75046778 75048005 + Stk16 protein_coding retained_intron MGP_WSBEiJ_T0020022.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75046819 75047911 + Stk16 protein_coding retained_intron MGP_WSBEiJ_T0020023.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75046821 75047222 + Stk16 protein_coding retained_intron MGP_WSBEiJ_T0020024.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75047215 75047973 + Stk16 protein_coding retained_intron MGP_WSBEiJ_T0020025.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75047440 75048834 + Stk16 protein_coding processed_transcript MGP_WSBEiJ_T0020026.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75047448 75048731 + Stk16 protein_coding retained_intron MGP_WSBEiJ_T0020027.1 MGP_WSBEiJ_G0015593.1 mouse_genomes_project 1 75047878 75048849 + Stk16 protein_coding retained_intron MGP_WSBEiJ_T0005683.1 MGP_WSBEiJ_G0004769.1 mouse_genomes_project 1 67269773 67283841 + Gm15669 lincRNA lincRNA MGP_WSBEiJ_T0011838.1 MGP_WSBEiJ_G0009968.1 mouse_genomes_project 1 59999097 59999404 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018347.1 MGP_WSBEiJ_G0015268.1 mouse_genomes_project 1 13338842 13339628 - Rpl7 protein_coding processed_transcript MGP_WSBEiJ_T0018348.1 MGP_WSBEiJ_G0015268.1 mouse_genomes_project 1 13338842 13341975 - MGP_WSBEiJ_P0018348 Rpl7 protein_coding protein_coding MGP_WSBEiJ_T0018349.1 MGP_WSBEiJ_G0015268.1 mouse_genomes_project 1 13339076 13340145 - Rpl7 protein_coding retained_intron MGP_WSBEiJ_T0005964.1 MGP_WSBEiJ_G0004992.1 mouse_genomes_project 1 195859378 195860760 + D730003I15Rik lincRNA lincRNA MGP_WSBEiJ_T0005965.1 MGP_WSBEiJ_G0004992.1 mouse_genomes_project 1 195859398 195861065 + D730003I15Rik lincRNA lincRNA MGP_WSBEiJ_T0002934.1 MGP_WSBEiJ_G0002755.1 mouse_genomes_project 1 197871714 197876830 + Gm15872 antisense antisense MGP_WSBEiJ_T0011732.1 MGP_WSBEiJ_G0009862.1 mouse_genomes_project 1 29370058 29371919 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021415.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134621431 134801797 - MGP_WSBEiJ_P0021415 Nfasc protein_coding protein_coding MGP_WSBEiJ_T0021416.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134621732 134732302 - MGP_WSBEiJ_P0021416 Nfasc protein_coding protein_coding MGP_WSBEiJ_T0021417.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134626796 134767754 - MGP_WSBEiJ_P0021417 Nfasc protein_coding protein_coding MGP_WSBEiJ_T0021418.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134627088 134801803 - MGP_WSBEiJ_P0021418 Nfasc protein_coding protein_coding MGP_WSBEiJ_T0021419.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134627177 134697109 - MGP_WSBEiJ_P0021419 Nfasc protein_coding protein_coding MGP_WSBEiJ_T0021420.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134633076 134643912 - Nfasc protein_coding processed_transcript MGP_WSBEiJ_T0021421.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134656610 134801837 - MGP_WSBEiJ_P0021421 Nfasc protein_coding protein_coding MGP_WSBEiJ_T0021422.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134658409 134661935 - Nfasc protein_coding retained_intron MGP_WSBEiJ_T0021423.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134677859 134683090 - Nfasc protein_coding retained_intron MGP_WSBEiJ_T0021424.1 MGP_WSBEiJ_G0015887.1 mouse_genomes_project 1 134723888 134801818 - Nfasc protein_coding processed_transcript MGP_WSBEiJ_T0100435.1 MGP_WSBEiJ_G0038894.1 mouse_genomes_project 1 178023260 178024285 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0022574.1 MGP_WSBEiJ_G0016116.1 mouse_genomes_project 1 170144917 170164713 - MGP_WSBEiJ_P0022574 Fmo9 protein_coding protein_coding MGP_WSBEiJ_T0022575.1 MGP_WSBEiJ_G0016116.1 mouse_genomes_project 1 170146150 170160555 - MGP_WSBEiJ_P0022575 Fmo9 protein_coding protein_coding MGP_WSBEiJ_T0005596.1 MGP_WSBEiJ_G0004707.1 mouse_genomes_project 1 33838173 33842210 + Gm28415 lincRNA lincRNA MGP_WSBEiJ_T0011791.1 MGP_WSBEiJ_G0009921.1 mouse_genomes_project 1 47508838 47509848 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002818.1 MGP_WSBEiJ_G0002665.1 mouse_genomes_project 1 134425698 134427080 + Gm15849 antisense antisense MGP_WSBEiJ_T0011803.1 MGP_WSBEiJ_G0009933.1 mouse_genomes_project 1 50069906 50070932 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097257.1 MGP_WSBEiJ_G0035937.1 mouse_genomes_project 1 168938471 168941544 - Gm37864 sense_intronic sense_intronic MGP_WSBEiJ_T0011974.1 MGP_WSBEiJ_G0010104.1 mouse_genomes_project 1 120587374 120588354 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005641.1 MGP_WSBEiJ_G0004736.1 mouse_genomes_project 1 49946436 49948956 + Gm29325 lincRNA lincRNA MGP_WSBEiJ_T0098821.1 MGP_WSBEiJ_G0037484.1 mouse_genomes_project 1 176715439 176715562 - Gm26077 snoRNA snoRNA MGP_WSBEiJ_T0011973.1 MGP_WSBEiJ_G0010103.1 mouse_genomes_project 1 120221934 120222253 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002867.1 MGP_WSBEiJ_G0002703.1 mouse_genomes_project 1 166689336 166695996 + Gm20471 antisense antisense MGP_WSBEiJ_T0005910.1 MGP_WSBEiJ_G0004952.1 mouse_genomes_project 1 181648146 181649548 - 2310043L19Rik lincRNA lincRNA MGP_WSBEiJ_T0020325.1 MGP_WSBEiJ_G0015645.1 mouse_genomes_project 1 85177807 85178183 + MGP_WSBEiJ_P0020325 G530012D18Rik protein_coding protein_coding MGP_WSBEiJ_T0020982.1 MGP_WSBEiJ_G0015796.1 mouse_genomes_project 1 108828367 108847249 + MGP_WSBEiJ_P0020982 Serpinb8 protein_coding protein_coding MGP_WSBEiJ_T0020983.1 MGP_WSBEiJ_G0015796.1 mouse_genomes_project 1 108828367 108848764 + MGP_WSBEiJ_P0020983 Serpinb8 protein_coding protein_coding MGP_WSBEiJ_T0020984.1 MGP_WSBEiJ_G0015796.1 mouse_genomes_project 1 108828407 108844492 + Serpinb8 protein_coding retained_intron MGP_WSBEiJ_T0020985.1 MGP_WSBEiJ_G0015796.1 mouse_genomes_project 1 108844221 108845667 + MGP_WSBEiJ_P0020985 Serpinb8 protein_coding protein_coding MGP_WSBEiJ_T0009420.1 MGP_WSBEiJ_G0007577.1 mouse_genomes_project 1 199782423 199782511 + Mir29c miRNA miRNA MGP_WSBEiJ_T0000451.1 MGP_WSBEiJ_G0000396.1 mouse_genomes_project 1 58569462 58571104 - TEC TEC MGP_WSBEiJ_T0000467.1 MGP_WSBEiJ_G0000412.1 mouse_genomes_project 1 62087964 62090520 + TEC TEC MGP_WSBEiJ_T0011668.1 MGP_WSBEiJ_G0009798.1 mouse_genomes_project 1 4750466 4751338 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019819.1 MGP_WSBEiJ_G0015560.1 mouse_genomes_project 1 74119922 74124820 - MGP_WSBEiJ_P0019819 Aamp protein_coding protein_coding MGP_WSBEiJ_T0019820.1 MGP_WSBEiJ_G0015560.1 mouse_genomes_project 1 74119928 74124098 - Aamp protein_coding retained_intron MGP_WSBEiJ_T0019821.1 MGP_WSBEiJ_G0015560.1 mouse_genomes_project 1 74119928 74124762 - MGP_WSBEiJ_P0019821 Aamp protein_coding protein_coding MGP_WSBEiJ_T0019822.1 MGP_WSBEiJ_G0015560.1 mouse_genomes_project 1 74121015 74124061 - MGP_WSBEiJ_P0019822 Aamp protein_coding protein_coding MGP_WSBEiJ_T0019823.1 MGP_WSBEiJ_G0015560.1 mouse_genomes_project 1 74121142 74123225 - Aamp protein_coding retained_intron MGP_WSBEiJ_T0019824.1 MGP_WSBEiJ_G0015560.1 mouse_genomes_project 1 74123278 74124503 - MGP_WSBEiJ_P0019824 Aamp protein_coding protein_coding MGP_WSBEiJ_T0011804.1 MGP_WSBEiJ_G0009934.1 mouse_genomes_project 1 50708855 50709267 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022638.1 MGP_WSBEiJ_G0016133.1 mouse_genomes_project 1 173785815 173808781 - MGP_WSBEiJ_P0022638 Uhmk1 protein_coding protein_coding MGP_WSBEiJ_T0022639.1 MGP_WSBEiJ_G0016133.1 mouse_genomes_project 1 173786903 173809287 - MGP_WSBEiJ_P0022639 Uhmk1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022999.1 MGP_WSBEiJ_G0016238.1 mouse_genomes_project 1 178437743 178772472 + MGP_WSBEiJ_P0022999 Fmn2 protein_coding protein_coding MGP_WSBEiJ_T0023000.1 MGP_WSBEiJ_G0016238.1 mouse_genomes_project 1 178478125 178525684 + Fmn2 protein_coding processed_transcript MGP_WSBEiJ_T0023001.1 MGP_WSBEiJ_G0016238.1 mouse_genomes_project 1 178553286 178559096 + Fmn2 protein_coding processed_transcript MGP_WSBEiJ_T0023002.1 MGP_WSBEiJ_G0016238.1 mouse_genomes_project 1 178553287 178644912 + MGP_WSBEiJ_P0023002 Fmn2 protein_coding protein_coding MGP_WSBEiJ_T0023003.1 MGP_WSBEiJ_G0016238.1 mouse_genomes_project 1 178556041 178651590 + Fmn2 protein_coding retained_intron MGP_WSBEiJ_T0023004.1 MGP_WSBEiJ_G0016238.1 mouse_genomes_project 1 178659379 178771063 + Fmn2 protein_coding processed_transcript MGP_WSBEiJ_T0022979.1 MGP_WSBEiJ_G0016222.1 mouse_genomes_project 1 177850915 177864000 - MGP_WSBEiJ_P0022979 Ifi202b protein_coding protein_coding MGP_WSBEiJ_T0020481.1 MGP_WSBEiJ_G0015680.1 mouse_genomes_project 1 87807065 87812275 + MGP_WSBEiJ_P0020481 3110079O15Rik protein_coding protein_coding MGP_WSBEiJ_T0020482.1 MGP_WSBEiJ_G0015680.1 mouse_genomes_project 1 87809333 87812251 + 3110079O15Rik protein_coding processed_transcript MGP_WSBEiJ_T0000445.1 MGP_WSBEiJ_G0000390.1 mouse_genomes_project 1 53778643 53781391 - TEC TEC MGP_WSBEiJ_T0002931.1 MGP_WSBEiJ_G0002753.1 mouse_genomes_project 1 196792885 196807753 + Gm10516 antisense antisense MGP_WSBEiJ_T0002932.1 MGP_WSBEiJ_G0002753.1 mouse_genomes_project 1 196793329 196802143 + Gm10516 antisense antisense MGP_WSBEiJ_T0005681.1 MGP_WSBEiJ_G0004767.1 mouse_genomes_project 1 63985052 63990009 + lincRNA lincRNA MGP_WSBEiJ_T0000465.1 MGP_WSBEiJ_G0000410.1 mouse_genomes_project 1 61036643 61037563 + TEC TEC MGP_WSBEiJ_T0002730.1 MGP_WSBEiJ_G0002600.1 mouse_genomes_project 1 41583013 41584261 + 8430432A02Rik antisense antisense MGP_WSBEiJ_T0011731.1 MGP_WSBEiJ_G0009861.1 mouse_genomes_project 1 29073953 29074514 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021787.1 MGP_WSBEiJ_G0015965.1 mouse_genomes_project 1 141912326 141952171 + MGP_WSBEiJ_P0021787 Aspm protein_coding protein_coding MGP_WSBEiJ_T0021788.1 MGP_WSBEiJ_G0015965.1 mouse_genomes_project 1 141912327 141931816 + Aspm protein_coding retained_intron MGP_WSBEiJ_T0021789.1 MGP_WSBEiJ_G0015965.1 mouse_genomes_project 1 141912329 141952174 + MGP_WSBEiJ_P0021789 Aspm protein_coding protein_coding MGP_WSBEiJ_T0021790.1 MGP_WSBEiJ_G0015965.1 mouse_genomes_project 1 141912373 141914709 + Aspm protein_coding retained_intron MGP_WSBEiJ_T0021791.1 MGP_WSBEiJ_G0015965.1 mouse_genomes_project 1 141940989 141945480 + Aspm protein_coding processed_transcript MGP_WSBEiJ_T0023032.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179842009 179873115 + MGP_WSBEiJ_P0023032 Exo1 protein_coding protein_coding MGP_WSBEiJ_T0023033.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179842222 179849027 + MGP_WSBEiJ_P0023033 Exo1 protein_coding protein_coding MGP_WSBEiJ_T0023034.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179842224 179851777 + MGP_WSBEiJ_P0023034 Exo1 protein_coding protein_coding MGP_WSBEiJ_T0023035.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179842241 179851799 + MGP_WSBEiJ_P0023035 Exo1 protein_coding protein_coding MGP_WSBEiJ_T0023036.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179842607 179851795 + MGP_WSBEiJ_P0023036 Exo1 protein_coding protein_coding MGP_WSBEiJ_T0023037.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179852597 179860632 + MGP_WSBEiJ_P0023037 Exo1 protein_coding protein_coding MGP_WSBEiJ_T0023038.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179861082 179868358 + MGP_WSBEiJ_P0023038 Exo1 protein_coding protein_coding MGP_WSBEiJ_T0023039.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179863887 179868175 + Exo1 protein_coding retained_intron MGP_WSBEiJ_T0023040.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179864025 179865854 + MGP_WSBEiJ_P0023040 Exo1 protein_coding protein_coding MGP_WSBEiJ_T0023041.1 MGP_WSBEiJ_G0016246.1 mouse_genomes_project 1 179867226 179868370 + Exo1 protein_coding processed_transcript MGP_WSBEiJ_T0022713.1 MGP_WSBEiJ_G0016154.1 mouse_genomes_project 1 174881657 174883023 + MGP_WSBEiJ_P0022713 Apoa2 protein_coding protein_coding MGP_WSBEiJ_T0022714.1 MGP_WSBEiJ_G0016154.1 mouse_genomes_project 1 174881685 174883022 + MGP_WSBEiJ_P0022714 Apoa2 protein_coding protein_coding MGP_WSBEiJ_T0022715.1 MGP_WSBEiJ_G0016154.1 mouse_genomes_project 1 174881687 174883017 + MGP_WSBEiJ_P0022715 Apoa2 protein_coding protein_coding MGP_WSBEiJ_T0022716.1 MGP_WSBEiJ_G0016154.1 mouse_genomes_project 1 174881694 174882981 + MGP_WSBEiJ_P0022716 Apoa2 protein_coding protein_coding MGP_WSBEiJ_T0019216.1 MGP_WSBEiJ_G0015443.1 mouse_genomes_project 1 53857115 53902762 - MGP_WSBEiJ_P0019216 Sf3b1 protein_coding protein_coding MGP_WSBEiJ_T0019217.1 MGP_WSBEiJ_G0015443.1 mouse_genomes_project 1 53857119 53863437 - Sf3b1 protein_coding retained_intron MGP_WSBEiJ_T0019218.1 MGP_WSBEiJ_G0015443.1 mouse_genomes_project 1 53861274 53864863 - Sf3b1 protein_coding retained_intron MGP_WSBEiJ_T0019219.1 MGP_WSBEiJ_G0015443.1 mouse_genomes_project 1 53875427 53902745 - Sf3b1 protein_coding retained_intron MGP_WSBEiJ_T0019220.1 MGP_WSBEiJ_G0015443.1 mouse_genomes_project 1 53879940 53889071 - Sf3b1 protein_coding retained_intron MGP_WSBEiJ_T0019221.1 MGP_WSBEiJ_G0015443.1 mouse_genomes_project 1 53886131 53902675 - MGP_WSBEiJ_P0019221 Sf3b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019222.1 MGP_WSBEiJ_G0015443.1 mouse_genomes_project 1 53889678 53902654 - Sf3b1 protein_coding processed_transcript MGP_WSBEiJ_T0019223.1 MGP_WSBEiJ_G0015443.1 mouse_genomes_project 1 53889808 53890807 - Sf3b1 protein_coding retained_intron MGP_WSBEiJ_T0000776.1 MGP_WSBEiJ_G0000716.1 mouse_genomes_project 1 199468877 199469409 + TEC TEC MGP_WSBEiJ_T0023219.1 MGP_WSBEiJ_G0016282.1 mouse_genomes_project 1 185103466 185111239 + MGP_WSBEiJ_P0023219 Lefty2 protein_coding protein_coding MGP_WSBEiJ_T0023220.1 MGP_WSBEiJ_G0016282.1 mouse_genomes_project 1 185104816 185107857 + Lefty2 protein_coding retained_intron MGP_WSBEiJ_T0011771.1 MGP_WSBEiJ_G0009901.1 mouse_genomes_project 1 42760694 42761811 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021510.1 MGP_WSBEiJ_G0015908.1 mouse_genomes_project 1 136203315 136214232 + MGP_WSBEiJ_P0021510 Fmod protein_coding protein_coding MGP_WSBEiJ_T0021511.1 MGP_WSBEiJ_G0015908.1 mouse_genomes_project 1 136203557 136206535 + MGP_WSBEiJ_P0021511 Fmod protein_coding protein_coding MGP_WSBEiJ_T0002880.1 MGP_WSBEiJ_G0002713.1 mouse_genomes_project 1 174614308 174618729 + Gm38204 antisense antisense MGP_WSBEiJ_T0000645.1 MGP_WSBEiJ_G0000588.1 mouse_genomes_project 1 152249984 152252612 - TEC TEC MGP_WSBEiJ_T0021741.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140477062 140535193 - Ptprc protein_coding retained_intron MGP_WSBEiJ_T0021742.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140477608 140598253 - MGP_WSBEiJ_P0021742 Ptprc protein_coding protein_coding MGP_WSBEiJ_T0021743.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140477614 140598214 - MGP_WSBEiJ_P0021743 Ptprc protein_coding protein_coding MGP_WSBEiJ_T0021744.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140477621 140598247 - MGP_WSBEiJ_P0021744 Ptprc protein_coding protein_coding MGP_WSBEiJ_T0021745.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140530781 140534226 - Ptprc protein_coding retained_intron MGP_WSBEiJ_T0021746.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140531003 140598181 - MGP_WSBEiJ_P0021746 Ptprc protein_coding protein_coding MGP_WSBEiJ_T0021747.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140536088 140539470 - Ptprc protein_coding retained_intron MGP_WSBEiJ_T0021748.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140536589 140598247 - MGP_WSBEiJ_P0021748 Ptprc protein_coding protein_coding MGP_WSBEiJ_T0021749.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140538222 140598246 - Ptprc protein_coding retained_intron MGP_WSBEiJ_T0021750.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140544476 140598243 - Ptprc protein_coding retained_intron MGP_WSBEiJ_T0021751.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140547879 140598648 - Ptprc protein_coding retained_intron MGP_WSBEiJ_T0021752.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140594923 140598136 - Ptprc protein_coding retained_intron MGP_WSBEiJ_T0021753.1 MGP_WSBEiJ_G0015957.1 mouse_genomes_project 1 140595690 140598196 - Ptprc protein_coding retained_intron MGP_WSBEiJ_T0011070.1 MGP_WSBEiJ_G0009227.1 mouse_genomes_project 1 199600180 199600474 + Gm23885 misc_RNA misc_RNA MGP_WSBEiJ_T0022107.1 MGP_WSBEiJ_G0016027.1 mouse_genomes_project 1 159163551 159202278 + MGP_WSBEiJ_P0022107 Tor1aip2 protein_coding protein_coding MGP_WSBEiJ_T0022108.1 MGP_WSBEiJ_G0016027.1 mouse_genomes_project 1 159163920 159189897 + MGP_WSBEiJ_P0022108 Tor1aip2 protein_coding protein_coding MGP_WSBEiJ_T0022109.1 MGP_WSBEiJ_G0016027.1 mouse_genomes_project 1 159164281 159184091 + MGP_WSBEiJ_P0022109 Tor1aip2 protein_coding protein_coding MGP_WSBEiJ_T0022110.1 MGP_WSBEiJ_G0016027.1 mouse_genomes_project 1 159169896 159182024 + Tor1aip2 protein_coding processed_transcript MGP_WSBEiJ_T0022111.1 MGP_WSBEiJ_G0016027.1 mouse_genomes_project 1 159169896 159202278 + MGP_WSBEiJ_P0022111 Tor1aip2 protein_coding protein_coding MGP_WSBEiJ_T0022112.1 MGP_WSBEiJ_G0016027.1 mouse_genomes_project 1 159193566 159196243 + Tor1aip2 protein_coding retained_intron MGP_WSBEiJ_T0100436.1 MGP_WSBEiJ_G0038895.1 mouse_genomes_project 1 178073234 178074125 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000615.1 MGP_WSBEiJ_G0000559.1 mouse_genomes_project 1 139715098 139715507 - TEC TEC MGP_WSBEiJ_T0097541.1 MGP_WSBEiJ_G0036204.1 mouse_genomes_project 1 62600162 62600266 - Gm23448 snRNA snRNA MGP_WSBEiJ_T0100407.1 MGP_WSBEiJ_G0038866.1 mouse_genomes_project 1 93295543 93295726 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0020995.1 MGP_WSBEiJ_G0015798.1 mouse_genomes_project 1 112134869 112228757 - MGP_WSBEiJ_P0020995 Cdh19 protein_coding protein_coding MGP_WSBEiJ_T0020996.1 MGP_WSBEiJ_G0015798.1 mouse_genomes_project 1 112136241 112229105 - MGP_WSBEiJ_P0020996 Cdh19 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020997.1 MGP_WSBEiJ_G0015798.1 mouse_genomes_project 1 112197923 112228964 - Cdh19 protein_coding processed_transcript MGP_WSBEiJ_T0018590.1 MGP_WSBEiJ_G0015321.1 mouse_genomes_project 1 32396690 32402802 - MGP_WSBEiJ_P0018590 Ccdc115 protein_coding protein_coding MGP_WSBEiJ_T0020260.1 MGP_WSBEiJ_G0015633.1 mouse_genomes_project 1 82875268 82887133 - MGP_WSBEiJ_P0020260 Tm4sf20 protein_coding protein_coding MGP_WSBEiJ_T0020261.1 MGP_WSBEiJ_G0015633.1 mouse_genomes_project 1 82876027 82887133 - Tm4sf20 protein_coding processed_transcript MGP_WSBEiJ_T0002775.1 MGP_WSBEiJ_G0002631.1 mouse_genomes_project 1 78266527 78280978 - Gm28410 antisense antisense MGP_WSBEiJ_T0011728.1 MGP_WSBEiJ_G0009858.1 mouse_genomes_project 1 27669071 27669693 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018555.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31693039 31746946 - MGP_WSBEiJ_P0018555 Zfp451 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018556.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31693039 31747088 - MGP_WSBEiJ_P0018556 Zfp451 protein_coding protein_coding MGP_WSBEiJ_T0018557.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31710149 31737954 - MGP_WSBEiJ_P0018557 Zfp451 protein_coding protein_coding MGP_WSBEiJ_T0018558.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31711658 31716540 - MGP_WSBEiJ_P0018558 Zfp451 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018559.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31711791 31746987 - MGP_WSBEiJ_P0018559 Zfp451 protein_coding protein_coding MGP_WSBEiJ_T0018560.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31714780 31746772 - Zfp451 protein_coding processed_transcript MGP_WSBEiJ_T0018561.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31719055 31733281 - Zfp451 protein_coding processed_transcript MGP_WSBEiJ_T0018562.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31724674 31747131 - MGP_WSBEiJ_P0018562 Zfp451 protein_coding protein_coding MGP_WSBEiJ_T0018563.1 MGP_WSBEiJ_G0015318.1 mouse_genomes_project 1 31746087 31747156 - Zfp451 protein_coding retained_intron MGP_WSBEiJ_T0011951.1 MGP_WSBEiJ_G0010081.1 mouse_genomes_project 1 111633919 111634457 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005601.1 MGP_WSBEiJ_G0004711.1 mouse_genomes_project 1 34047116 34047937 + 4930535G08Rik lincRNA lincRNA MGP_WSBEiJ_T0000770.1 MGP_WSBEiJ_G0000710.1 mouse_genomes_project 1 197975875 197978444 + TEC TEC MGP_WSBEiJ_T0011941.1 MGP_WSBEiJ_G0010071.1 mouse_genomes_project 1 107580783 107581054 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002854.1 MGP_WSBEiJ_G0002694.1 mouse_genomes_project 1 163241370 163244716 - Gm38039 antisense antisense MGP_WSBEiJ_T0016488.1 MGP_WSBEiJ_G0014542.1 mouse_genomes_project 1 175421220 175426474 - A630035G10Rik processed_transcript lincRNA MGP_WSBEiJ_T0016489.1 MGP_WSBEiJ_G0014542.1 mouse_genomes_project 1 175424659 175426522 - A630035G10Rik processed_transcript retained_intron MGP_WSBEiJ_T0020131.1 MGP_WSBEiJ_G0015607.1 mouse_genomes_project 1 75346019 75349308 + MGP_WSBEiJ_P0020131 Inha protein_coding protein_coding MGP_WSBEiJ_T0021321.1 MGP_WSBEiJ_G0015866.1 mouse_genomes_project 1 133608636 133622165 + MGP_WSBEiJ_P0021321 Avpr1b protein_coding protein_coding MGP_WSBEiJ_T0021322.1 MGP_WSBEiJ_G0015866.1 mouse_genomes_project 1 133609127 133619919 + MGP_WSBEiJ_P0021322 Avpr1b protein_coding protein_coding MGP_WSBEiJ_T0011880.1 MGP_WSBEiJ_G0010010.1 mouse_genomes_project 1 75983712 75984112 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000370.1 MGP_WSBEiJ_G0000318.1 mouse_genomes_project 1 18883367 18885694 - TEC TEC MGP_WSBEiJ_T0097574.1 MGP_WSBEiJ_G0036237.1 mouse_genomes_project 1 136463544 136463651 - Gm24517 snRNA snRNA MGP_WSBEiJ_T0019346.1 MGP_WSBEiJ_G0015468.1 mouse_genomes_project 1 57472728 57519010 - MGP_WSBEiJ_P0019346 Orc2 protein_coding protein_coding MGP_WSBEiJ_T0019347.1 MGP_WSBEiJ_G0015468.1 mouse_genomes_project 1 57474161 57515317 - MGP_WSBEiJ_P0019347 Orc2 protein_coding protein_coding MGP_WSBEiJ_T0019348.1 MGP_WSBEiJ_G0015468.1 mouse_genomes_project 1 57493063 57494202 - Orc2 protein_coding retained_intron MGP_WSBEiJ_T0019349.1 MGP_WSBEiJ_G0015468.1 mouse_genomes_project 1 57497184 57518826 - MGP_WSBEiJ_P0019349 Orc2 protein_coding protein_coding MGP_WSBEiJ_T0019350.1 MGP_WSBEiJ_G0015468.1 mouse_genomes_project 1 57514239 57518856 - MGP_WSBEiJ_P0019350 Orc2 protein_coding protein_coding MGP_WSBEiJ_T0021720.1 MGP_WSBEiJ_G0015953.1 mouse_genomes_project 1 138741764 138744285 + Ddx59 protein_coding retained_intron MGP_WSBEiJ_T0021721.1 MGP_WSBEiJ_G0015953.1 mouse_genomes_project 1 138741764 138766613 + MGP_WSBEiJ_P0021721 Ddx59 protein_coding protein_coding MGP_WSBEiJ_T0021722.1 MGP_WSBEiJ_G0015953.1 mouse_genomes_project 1 138756634 138758877 + Ddx59 protein_coding processed_transcript MGP_WSBEiJ_T0021723.1 MGP_WSBEiJ_G0015953.1 mouse_genomes_project 1 138758853 138760518 + Ddx59 protein_coding retained_intron MGP_WSBEiJ_T0022697.1 MGP_WSBEiJ_G0016152.1 mouse_genomes_project 1 174869813 174874685 + MGP_WSBEiJ_P0022697 Nr1i3 protein_coding protein_coding MGP_WSBEiJ_T0022698.1 MGP_WSBEiJ_G0016152.1 mouse_genomes_project 1 174869814 174874683 + MGP_WSBEiJ_P0022698 Nr1i3 protein_coding protein_coding MGP_WSBEiJ_T0022699.1 MGP_WSBEiJ_G0016152.1 mouse_genomes_project 1 174869829 174876541 + MGP_WSBEiJ_P0022699 Nr1i3 protein_coding protein_coding MGP_WSBEiJ_T0022700.1 MGP_WSBEiJ_G0016152.1 mouse_genomes_project 1 174869837 174874841 + Nr1i3 protein_coding retained_intron MGP_WSBEiJ_T0022701.1 MGP_WSBEiJ_G0016152.1 mouse_genomes_project 1 174869845 174874685 + MGP_WSBEiJ_P0022701 Nr1i3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022702.1 MGP_WSBEiJ_G0016152.1 mouse_genomes_project 1 174869864 174875032 + Nr1i3 protein_coding retained_intron MGP_WSBEiJ_T0022703.1 MGP_WSBEiJ_G0016152.1 mouse_genomes_project 1 174869864 174874684 + MGP_WSBEiJ_P0022703 Nr1i3 protein_coding protein_coding MGP_WSBEiJ_T0022704.1 MGP_WSBEiJ_G0016152.1 mouse_genomes_project 1 174870195 174874565 + Nr1i3 protein_coding retained_intron MGP_WSBEiJ_T0000536.1 MGP_WSBEiJ_G0000481.1 mouse_genomes_project 1 92619667 92622965 + TEC TEC MGP_WSBEiJ_T0012107.1 MGP_WSBEiJ_G0010237.1 mouse_genomes_project 1 181265793 181266110 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005760.1 MGP_WSBEiJ_G0004831.1 mouse_genomes_project 1 96538984 96554535 - 4930598F16Rik lincRNA lincRNA MGP_WSBEiJ_T0021513.1 MGP_WSBEiJ_G0015910.1 mouse_genomes_project 1 136280584 136326387 + MGP_WSBEiJ_P0021513 Chit1 protein_coding protein_coding MGP_WSBEiJ_T0021514.1 MGP_WSBEiJ_G0015910.1 mouse_genomes_project 1 136280584 136326387 + MGP_WSBEiJ_P0021514 Chit1 protein_coding protein_coding MGP_WSBEiJ_T0021515.1 MGP_WSBEiJ_G0015910.1 mouse_genomes_project 1 136312300 136326386 + MGP_WSBEiJ_P0021515 Chit1 protein_coding protein_coding MGP_WSBEiJ_T0022441.1 MGP_WSBEiJ_G0016088.1 mouse_genomes_project 1 167590968 167663020 + MGP_WSBEiJ_P0022441 F5 protein_coding protein_coding MGP_WSBEiJ_T0005849.1 MGP_WSBEiJ_G0004902.1 mouse_genomes_project 1 153870801 153874343 + Gm29188 lincRNA lincRNA MGP_WSBEiJ_T0005854.1 MGP_WSBEiJ_G0004907.1 mouse_genomes_project 1 157056631 157060992 - Gm29291 lincRNA lincRNA MGP_WSBEiJ_T0005855.1 MGP_WSBEiJ_G0004907.1 mouse_genomes_project 1 157056787 157060996 - Gm29291 lincRNA lincRNA MGP_WSBEiJ_T0100419.1 MGP_WSBEiJ_G0038878.1 mouse_genomes_project 1 119135351 119138194 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011761.1 MGP_WSBEiJ_G0009891.1 mouse_genomes_project 1 37543502 37544057 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023438.1 MGP_WSBEiJ_G0016331.1 mouse_genomes_project 1 192744682 192842474 + protein_coding retained_intron MGP_WSBEiJ_T0023439.1 MGP_WSBEiJ_G0016331.1 mouse_genomes_project 1 192744694 192948939 + protein_coding retained_intron MGP_WSBEiJ_T0023440.1 MGP_WSBEiJ_G0016331.1 mouse_genomes_project 1 192745693 193474661 + MGP_WSBEiJ_P0023440 protein_coding protein_coding MGP_WSBEiJ_T0023441.1 MGP_WSBEiJ_G0016331.1 mouse_genomes_project 1 193038976 193180148 + protein_coding retained_intron MGP_WSBEiJ_T0023442.1 MGP_WSBEiJ_G0016331.1 mouse_genomes_project 1 193463411 193474585 + MGP_WSBEiJ_P0023442 protein_coding protein_coding MGP_WSBEiJ_T0000699.1 MGP_WSBEiJ_G0000642.1 mouse_genomes_project 1 168874717 168876047 + TEC TEC MGP_WSBEiJ_T0100392.1 MGP_WSBEiJ_G0038851.1 mouse_genomes_project 1 62467212 62469071 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0021524.1 MGP_WSBEiJ_G0015912.1 mouse_genomes_project 1 136373080 136380803 + MGP_WSBEiJ_P0021524 Mybph protein_coding protein_coding MGP_WSBEiJ_T0021525.1 MGP_WSBEiJ_G0015912.1 mouse_genomes_project 1 136373089 136380804 + MGP_WSBEiJ_P0021525 Mybph protein_coding protein_coding MGP_WSBEiJ_T0021480.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135750763 135789838 - MGP_WSBEiJ_P0021480 Zc3h11a protein_coding protein_coding MGP_WSBEiJ_T0021482.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135756588 135759204 - Zc3h11a protein_coding processed_transcript MGP_WSBEiJ_T0021483.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135759101 135771759 - MGP_WSBEiJ_P0021483 Zc3h11a protein_coding protein_coding MGP_WSBEiJ_T0021484.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135771472 135797154 - MGP_WSBEiJ_P0021484 Zc3h11a protein_coding protein_coding MGP_WSBEiJ_T0021485.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135771730 135797134 - MGP_WSBEiJ_P0021485 Zc3h11a protein_coding protein_coding MGP_WSBEiJ_T0021486.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135774823 135797136 - Zc3h11a protein_coding retained_intron MGP_WSBEiJ_T0021487.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135775114 135797058 - MGP_WSBEiJ_P0021487 Zc3h11a protein_coding protein_coding MGP_WSBEiJ_T0021488.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135780463 135797072 - MGP_WSBEiJ_P0021488 Zc3h11a protein_coding protein_coding MGP_WSBEiJ_T0021489.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135781898 135797057 - Zc3h11a protein_coding retained_intron MGP_WSBEiJ_T0021490.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135782151 135797144 - Zc3h11a protein_coding processed_transcript MGP_WSBEiJ_T0021491.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135789549 135797135 - Zc3h11a protein_coding processed_transcript MGP_WSBEiJ_T0021492.1 MGP_WSBEiJ_G0015902.1 mouse_genomes_project 1 135790461 135797156 - Zc3h11a protein_coding retained_intron MGP_WSBEiJ_T0023433.1 MGP_WSBEiJ_G0016330.1 mouse_genomes_project 1 192046196 192516564 + MGP_WSBEiJ_P0023433 Esrrg protein_coding protein_coding MGP_WSBEiJ_T0023434.1 MGP_WSBEiJ_G0016330.1 mouse_genomes_project 1 192046434 192692134 + MGP_WSBEiJ_P0023434 Esrrg protein_coding protein_coding MGP_WSBEiJ_T0023435.1 MGP_WSBEiJ_G0016330.1 mouse_genomes_project 1 192047101 192241733 + Esrrg protein_coding processed_transcript MGP_WSBEiJ_T0023436.1 MGP_WSBEiJ_G0016330.1 mouse_genomes_project 1 192462048 192692633 + MGP_WSBEiJ_P0023436 Esrrg protein_coding protein_coding MGP_WSBEiJ_T0023437.1 MGP_WSBEiJ_G0016330.1 mouse_genomes_project 1 192462089 192692632 + MGP_WSBEiJ_P0023437 Esrrg protein_coding protein_coding MGP_WSBEiJ_T0098823.1 MGP_WSBEiJ_G0037486.1 mouse_genomes_project 1 191086827 191086962 + Gm26169 snoRNA snoRNA MGP_WSBEiJ_T0021288.1 MGP_WSBEiJ_G0015860.1 mouse_genomes_project 1 133130697 133142396 - MGP_WSBEiJ_P0021288 protein_coding protein_coding MGP_WSBEiJ_T0021289.1 MGP_WSBEiJ_G0015860.1 mouse_genomes_project 1 133133117 133142301 - MGP_WSBEiJ_P0021289 protein_coding protein_coding MGP_WSBEiJ_T0021004.1 MGP_WSBEiJ_G0015801.1 mouse_genomes_project 1 119690072 119707251 - MGP_WSBEiJ_P0021004 Tsn protein_coding protein_coding MGP_WSBEiJ_T0021005.1 MGP_WSBEiJ_G0015801.1 mouse_genomes_project 1 119694938 119706072 - Tsn protein_coding retained_intron MGP_WSBEiJ_T0021006.1 MGP_WSBEiJ_G0015801.1 mouse_genomes_project 1 119696177 119705821 - Tsn protein_coding retained_intron MGP_WSBEiJ_T0021007.1 MGP_WSBEiJ_G0015801.1 mouse_genomes_project 1 119700539 119707297 - Tsn protein_coding processed_transcript MGP_WSBEiJ_T0021008.1 MGP_WSBEiJ_G0015801.1 mouse_genomes_project 1 119704541 119707071 - Tsn protein_coding retained_intron MGP_WSBEiJ_T0021009.1 MGP_WSBEiJ_G0015801.1 mouse_genomes_project 1 119706515 119707863 - Tsn protein_coding retained_intron MGP_WSBEiJ_T0018508.1 MGP_WSBEiJ_G0015307.1 mouse_genomes_project 1 26444204 26448331 - MGP_WSBEiJ_P0018508 Gm597 protein_coding protein_coding MGP_WSBEiJ_T0096890.1 MGP_WSBEiJ_G0035571.1 mouse_genomes_project 1 157364547 157364667 - n-R5s220 rRNA rRNA MGP_WSBEiJ_T0002891.1 MGP_WSBEiJ_G0002723.1 mouse_genomes_project 1 181427506 181428293 - Gm26801 antisense antisense MGP_WSBEiJ_T0002892.1 MGP_WSBEiJ_G0002723.1 mouse_genomes_project 1 181428255 181442551 - Gm26801 antisense antisense MGP_WSBEiJ_T0020487.1 MGP_WSBEiJ_G0015682.1 mouse_genomes_project 1 87850056 87940007 + MGP_WSBEiJ_P0020487 Neu2 protein_coding protein_coding MGP_WSBEiJ_T0020488.1 MGP_WSBEiJ_G0015682.1 mouse_genomes_project 1 87917509 87941175 + MGP_WSBEiJ_P0020488 Neu2 protein_coding protein_coding MGP_WSBEiJ_T0020489.1 MGP_WSBEiJ_G0015682.1 mouse_genomes_project 1 87917509 87941158 + MGP_WSBEiJ_P0020489 Neu2 protein_coding protein_coding MGP_WSBEiJ_T0020490.1 MGP_WSBEiJ_G0015682.1 mouse_genomes_project 1 87917528 87939902 + MGP_WSBEiJ_P0020490 Neu2 protein_coding protein_coding MGP_WSBEiJ_T0020491.1 MGP_WSBEiJ_G0015682.1 mouse_genomes_project 1 87926642 87941182 + MGP_WSBEiJ_P0020491 Neu2 protein_coding protein_coding MGP_WSBEiJ_T0020492.1 MGP_WSBEiJ_G0015682.1 mouse_genomes_project 1 87937894 87941158 + MGP_WSBEiJ_P0020492 Neu2 protein_coding protein_coding MGP_WSBEiJ_T0020493.1 MGP_WSBEiJ_G0015682.1 mouse_genomes_project 1 87937894 87941164 + MGP_WSBEiJ_P0020493 Neu2 protein_coding protein_coding MGP_WSBEiJ_T0097561.1 MGP_WSBEiJ_G0036224.1 mouse_genomes_project 1 107085724 107085831 + Gm26214 snRNA snRNA MGP_WSBEiJ_T0097233.1 MGP_WSBEiJ_G0035914.1 mouse_genomes_project 1 36251079 36252090 - Gm37062 sense_intronic sense_intronic MGP_WSBEiJ_T0023367.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189135390 189169694 - MGP_WSBEiJ_P0023367 Marc2 protein_coding protein_coding MGP_WSBEiJ_T0023368.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189136000 189151519 - Marc2 protein_coding processed_transcript MGP_WSBEiJ_T0023369.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189136004 189145858 - Marc2 protein_coding retained_intron MGP_WSBEiJ_T0023370.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189136014 189151304 - Marc2 protein_coding processed_transcript MGP_WSBEiJ_T0023371.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189136016 189142266 - Marc2 protein_coding retained_intron MGP_WSBEiJ_T0023372.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189136082 189151294 - Marc2 protein_coding processed_transcript MGP_WSBEiJ_T0023373.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189142059 189169621 - Marc2 protein_coding processed_transcript MGP_WSBEiJ_T0023374.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189145205 189170262 - MGP_WSBEiJ_P0023374 Marc2 protein_coding protein_coding MGP_WSBEiJ_T0023375.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189151821 189169384 - Marc2 protein_coding processed_transcript MGP_WSBEiJ_T0023376.1 MGP_WSBEiJ_G0016316.1 mouse_genomes_project 1 189152881 189169660 - Marc2 protein_coding retained_intron MGP_WSBEiJ_T0020860.1 MGP_WSBEiJ_G0015763.1 mouse_genomes_project 1 94652801 94755533 + MGP_WSBEiJ_P0020860 protein_coding protein_coding MGP_WSBEiJ_T0020862.1 MGP_WSBEiJ_G0015763.1 mouse_genomes_project 1 94663528 94686361 + MGP_WSBEiJ_P0020862 protein_coding protein_coding MGP_WSBEiJ_T0022903.1 MGP_WSBEiJ_G0016192.1 mouse_genomes_project 1 176095445 176133412 + MGP_WSBEiJ_P0022903 Kcnj10 protein_coding protein_coding MGP_WSBEiJ_T0005662.1 MGP_WSBEiJ_G0004751.1 mouse_genomes_project 1 59968049 59977649 - lincRNA lincRNA MGP_WSBEiJ_T0009377.1 MGP_WSBEiJ_G0007534.1 mouse_genomes_project 1 101874860 101874969 + Gm25537 miRNA miRNA MGP_WSBEiJ_T0021755.1 MGP_WSBEiJ_G0015959.1 mouse_genomes_project 1 140902870 141041763 - MGP_WSBEiJ_P0021755 Nek7 protein_coding protein_coding MGP_WSBEiJ_T0021756.1 MGP_WSBEiJ_G0015959.1 mouse_genomes_project 1 140934532 141041688 - Nek7 protein_coding retained_intron MGP_WSBEiJ_T0020849.1 MGP_WSBEiJ_G0015759.1 mouse_genomes_project 1 94595480 94614644 + MGP_WSBEiJ_P0020849 Ing5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020850.1 MGP_WSBEiJ_G0015759.1 mouse_genomes_project 1 94595500 94614649 + MGP_WSBEiJ_P0020850 Ing5 protein_coding protein_coding MGP_WSBEiJ_T0098762.1 MGP_WSBEiJ_G0037425.1 mouse_genomes_project 1 62466662 62466697 + Gm26457 snoRNA snoRNA MGP_WSBEiJ_T0098769.1 MGP_WSBEiJ_G0037432.1 mouse_genomes_project 1 86298572 86298694 + Gm22786 snoRNA snoRNA MGP_WSBEiJ_T0000362.1 MGP_WSBEiJ_G0000310.1 mouse_genomes_project 1 12596105 12597647 + TEC TEC MGP_WSBEiJ_T0012137.1 MGP_WSBEiJ_G0010267.1 mouse_genomes_project 1 197741443 197741558 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020865.1 MGP_WSBEiJ_G0015765.1 mouse_genomes_project 1 94854064 94869544 - MGP_WSBEiJ_P0020865 Pdcd1 protein_coding protein_coding MGP_WSBEiJ_T0018915.1 MGP_WSBEiJ_G0015383.1 mouse_genomes_project 1 38805943 38841114 + MGP_WSBEiJ_P0018915 Il18rap protein_coding protein_coding MGP_WSBEiJ_T0018916.1 MGP_WSBEiJ_G0015383.1 mouse_genomes_project 1 38805986 38829565 + Il18rap protein_coding retained_intron MGP_WSBEiJ_T0018917.1 MGP_WSBEiJ_G0015383.1 mouse_genomes_project 1 38806029 38815221 + Il18rap protein_coding retained_intron MGP_WSBEiJ_T0018918.1 MGP_WSBEiJ_G0015383.1 mouse_genomes_project 1 38831770 38837312 + Il18rap protein_coding retained_intron MGP_WSBEiJ_T0011842.1 MGP_WSBEiJ_G0009972.1 mouse_genomes_project 1 60410894 60411596 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011866.1 MGP_WSBEiJ_G0009996.1 mouse_genomes_project 1 67815886 67816333 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021757.1 MGP_WSBEiJ_G0015960.1 mouse_genomes_project 1 141243294 141280091 - MGP_WSBEiJ_P0021757 Lhx9 protein_coding protein_coding MGP_WSBEiJ_T0021758.1 MGP_WSBEiJ_G0015960.1 mouse_genomes_project 1 141248472 141265083 - MGP_WSBEiJ_P0021758 Lhx9 protein_coding protein_coding MGP_WSBEiJ_T0021759.1 MGP_WSBEiJ_G0015960.1 mouse_genomes_project 1 141248472 141277759 - MGP_WSBEiJ_P0021759 Lhx9 protein_coding protein_coding MGP_WSBEiJ_T0021760.1 MGP_WSBEiJ_G0015960.1 mouse_genomes_project 1 141253617 141265055 - MGP_WSBEiJ_P0021760 Lhx9 protein_coding protein_coding MGP_WSBEiJ_T0021761.1 MGP_WSBEiJ_G0015960.1 mouse_genomes_project 1 141254040 141280243 - MGP_WSBEiJ_P0021761 Lhx9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021762.1 MGP_WSBEiJ_G0015960.1 mouse_genomes_project 1 141254387 141256315 - Lhx9 protein_coding retained_intron MGP_WSBEiJ_T0021763.1 MGP_WSBEiJ_G0015960.1 mouse_genomes_project 1 141255523 141265080 - MGP_WSBEiJ_P0021763 Lhx9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000351.1 MGP_WSBEiJ_G0000299.1 mouse_genomes_project 1 10361173 10363328 - TEC TEC MGP_WSBEiJ_T0019914.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74524609 74569885 + MGP_WSBEiJ_P0019914 Ttll4 protein_coding protein_coding MGP_WSBEiJ_T0019915.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74524614 74548086 + MGP_WSBEiJ_P0019915 Ttll4 protein_coding protein_coding MGP_WSBEiJ_T0019916.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74524681 74536131 + Ttll4 protein_coding retained_intron MGP_WSBEiJ_T0019917.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74524681 74544756 + MGP_WSBEiJ_P0019917 Ttll4 protein_coding protein_coding MGP_WSBEiJ_T0019918.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74541862 74564129 + MGP_WSBEiJ_P0019918 Ttll4 protein_coding protein_coding MGP_WSBEiJ_T0019919.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74548054 74551357 + Ttll4 protein_coding processed_transcript MGP_WSBEiJ_T0019920.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74548684 74551379 + Ttll4 protein_coding processed_transcript MGP_WSBEiJ_T0019921.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74552151 74553407 + Ttll4 protein_coding retained_intron MGP_WSBEiJ_T0019922.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74552801 74567984 + Ttll4 protein_coding processed_transcript MGP_WSBEiJ_T0019923.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74561364 74566030 + Ttll4 protein_coding retained_intron MGP_WSBEiJ_T0019924.1 MGP_WSBEiJ_G0015574.1 mouse_genomes_project 1 74561885 74563993 + Ttll4 protein_coding processed_transcript MGP_WSBEiJ_T0000583.1 MGP_WSBEiJ_G0000528.1 mouse_genomes_project 1 129891430 129895313 - TEC TEC MGP_WSBEiJ_T0020857.1 MGP_WSBEiJ_G0015761.1 mouse_genomes_project 1 94645918 94831682 + MGP_WSBEiJ_P0020857 protein_coding protein_coding MGP_WSBEiJ_T0000416.1 MGP_WSBEiJ_G0000361.1 mouse_genomes_project 1 34068180 34069552 - TEC TEC MGP_WSBEiJ_T0012120.1 MGP_WSBEiJ_G0010250.1 mouse_genomes_project 1 187683854 187684246 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000710.1 MGP_WSBEiJ_G0000653.1 mouse_genomes_project 1 176147518 176150249 - TEC TEC MGP_WSBEiJ_T0000681.1 MGP_WSBEiJ_G0000624.1 mouse_genomes_project 1 163938892 163940967 - TEC TEC MGP_WSBEiJ_T0009349.1 MGP_WSBEiJ_G0007506.1 mouse_genomes_project 1 63373435 63373499 - Mir6899 miRNA miRNA MGP_WSBEiJ_T0011069.1 MGP_WSBEiJ_G0009226.1 mouse_genomes_project 1 197685024 197685313 - Gm23583 misc_RNA misc_RNA MGP_WSBEiJ_T0005597.1 MGP_WSBEiJ_G0004708.1 mouse_genomes_project 1 33912584 33913839 + 1110002O04Rik lincRNA lincRNA MGP_WSBEiJ_T0009392.1 MGP_WSBEiJ_G0007549.1 mouse_genomes_project 1 154344606 154344664 + Mir7682 miRNA miRNA MGP_WSBEiJ_T0023208.1 MGP_WSBEiJ_G0016278.1 mouse_genomes_project 1 184886817 184891302 - MGP_WSBEiJ_P0023208 Mixl1 protein_coding protein_coding MGP_WSBEiJ_T0000567.1 MGP_WSBEiJ_G0000512.1 mouse_genomes_project 1 124954226 124957742 - TEC TEC MGP_WSBEiJ_T0011773.1 MGP_WSBEiJ_G0009903.1 mouse_genomes_project 1 43132805 43133225 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097580.1 MGP_WSBEiJ_G0036243.1 mouse_genomes_project 1 143779344 143779451 + Gm25457 snRNA snRNA MGP_WSBEiJ_T0021537.1 MGP_WSBEiJ_G0015916.1 mouse_genomes_project 1 136534268 136552981 - MGP_WSBEiJ_P0021537 Tmem183a protein_coding protein_coding MGP_WSBEiJ_T0021538.1 MGP_WSBEiJ_G0015916.1 mouse_genomes_project 1 136535852 136552943 - MGP_WSBEiJ_P0021538 Tmem183a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021539.1 MGP_WSBEiJ_G0015916.1 mouse_genomes_project 1 136536080 136540090 - Tmem183a protein_coding retained_intron MGP_WSBEiJ_T0021540.1 MGP_WSBEiJ_G0015916.1 mouse_genomes_project 1 136545228 136552955 - Tmem183a protein_coding retained_intron MGP_WSBEiJ_T0021541.1 MGP_WSBEiJ_G0015916.1 mouse_genomes_project 1 136545494 136552692 - MGP_WSBEiJ_P0021541 Tmem183a protein_coding protein_coding MGP_WSBEiJ_T0011858.1 MGP_WSBEiJ_G0009988.1 mouse_genomes_project 1 64931984 64932758 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020645.1 MGP_WSBEiJ_G0015715.1 mouse_genomes_project 1 92026704 92038051 + MGP_WSBEiJ_P0020645 Klhl30 protein_coding protein_coding MGP_WSBEiJ_T0002896.1 MGP_WSBEiJ_G0002727.1 mouse_genomes_project 1 184427940 184444854 + Gm31728 antisense antisense MGP_WSBEiJ_T0009385.1 MGP_WSBEiJ_G0007542.1 mouse_genomes_project 1 135871433 135871521 - Mir6903 miRNA miRNA MGP_WSBEiJ_T0011808.1 MGP_WSBEiJ_G0009938.1 mouse_genomes_project 1 51542961 51543372 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020418.1 MGP_WSBEiJ_G0015667.1 mouse_genomes_project 1 86935699 86941541 - MGP_WSBEiJ_P0020418 Nppc protein_coding protein_coding MGP_WSBEiJ_T0021405.1 MGP_WSBEiJ_G0015885.1 mouse_genomes_project 1 134558503 134560913 + MGP_WSBEiJ_P0021405 Tmem81 protein_coding protein_coding MGP_WSBEiJ_T0021406.1 MGP_WSBEiJ_G0015885.1 mouse_genomes_project 1 134559162 134560913 + MGP_WSBEiJ_P0021406 Tmem81 protein_coding protein_coding MGP_WSBEiJ_T0021847.1 MGP_WSBEiJ_G0015978.1 mouse_genomes_project 1 147110153 147166657 - Rgs21 protein_coding processed_transcript MGP_WSBEiJ_T0021848.1 MGP_WSBEiJ_G0015978.1 mouse_genomes_project 1 147112110 147147749 - MGP_WSBEiJ_P0021848 Rgs21 protein_coding protein_coding MGP_WSBEiJ_T0005894.1 MGP_WSBEiJ_G0004937.1 mouse_genomes_project 1 169883167 169889389 - lincRNA lincRNA MGP_WSBEiJ_T0019707.1 MGP_WSBEiJ_G0015534.1 mouse_genomes_project 1 66558538 66674325 + MGP_WSBEiJ_P0019707 Cps1 protein_coding protein_coding MGP_WSBEiJ_T0020115.1 MGP_WSBEiJ_G0015606.1 mouse_genomes_project 1 75317000 75323163 + MGP_WSBEiJ_P0020115 Tmem198 protein_coding protein_coding MGP_WSBEiJ_T0020116.1 MGP_WSBEiJ_G0015606.1 mouse_genomes_project 1 75317044 75320081 + MGP_WSBEiJ_P0020116 Tmem198 protein_coding protein_coding MGP_WSBEiJ_T0020117.1 MGP_WSBEiJ_G0015606.1 mouse_genomes_project 1 75317048 75323175 + MGP_WSBEiJ_P0020117 Tmem198 protein_coding protein_coding MGP_WSBEiJ_T0020118.1 MGP_WSBEiJ_G0015606.1 mouse_genomes_project 1 75317172 75320144 + MGP_WSBEiJ_P0020118 Tmem198 protein_coding protein_coding MGP_WSBEiJ_T0000678.1 MGP_WSBEiJ_G0000621.1 mouse_genomes_project 1 163639304 163640461 - TEC TEC MGP_WSBEiJ_T0005767.1 MGP_WSBEiJ_G0004837.1 mouse_genomes_project 1 99528798 99551741 + Gm7967 lincRNA lincRNA MGP_WSBEiJ_T0005768.1 MGP_WSBEiJ_G0004837.1 mouse_genomes_project 1 99528799 99551501 + Gm7967 lincRNA lincRNA MGP_WSBEiJ_T0005829.1 MGP_WSBEiJ_G0004888.1 mouse_genomes_project 1 138963484 138966037 - Platr23 lincRNA lincRNA MGP_WSBEiJ_T0005951.1 MGP_WSBEiJ_G0004981.1 mouse_genomes_project 1 190548779 190599304 + Gm37134 lincRNA lincRNA MGP_WSBEiJ_T0000738.1 MGP_WSBEiJ_G0000680.1 mouse_genomes_project 1 185636355 185637666 + TEC TEC MGP_WSBEiJ_T0098797.1 MGP_WSBEiJ_G0037460.1 mouse_genomes_project 1 146358253 146358388 + Gm25663 snoRNA snoRNA MGP_WSBEiJ_T0019156.1 MGP_WSBEiJ_G0015430.1 mouse_genomes_project 1 51944496 51978025 - MGP_WSBEiJ_P0019156 1700019A02Rik protein_coding protein_coding MGP_WSBEiJ_T0019157.1 MGP_WSBEiJ_G0015430.1 mouse_genomes_project 1 51944519 51977997 - MGP_WSBEiJ_P0019157 1700019A02Rik protein_coding protein_coding MGP_WSBEiJ_T0020542.1 MGP_WSBEiJ_G0015690.1 mouse_genomes_project 1 88531227 88630309 + MGP_WSBEiJ_P0020542 protein_coding protein_coding MGP_WSBEiJ_T0020544.1 MGP_WSBEiJ_G0015690.1 mouse_genomes_project 1 88547155 88625827 + MGP_WSBEiJ_P0020544 protein_coding protein_coding MGP_WSBEiJ_T0098729.1 MGP_WSBEiJ_G0037392.1 mouse_genomes_project 1 8261203 8261331 - Gm24173 snoRNA snoRNA MGP_WSBEiJ_T0011976.1 MGP_WSBEiJ_G0010106.1 mouse_genomes_project 1 120942446 120942839 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023082.1 MGP_WSBEiJ_G0016255.1 mouse_genomes_project 1 181767665 181803217 - MGP_WSBEiJ_P0023082 Adss protein_coding protein_coding MGP_WSBEiJ_T0023083.1 MGP_WSBEiJ_G0016255.1 mouse_genomes_project 1 181767880 181773292 - Adss protein_coding retained_intron MGP_WSBEiJ_T0023084.1 MGP_WSBEiJ_G0016255.1 mouse_genomes_project 1 181779302 181803207 - Adss protein_coding retained_intron MGP_WSBEiJ_T0011736.1 MGP_WSBEiJ_G0009866.1 mouse_genomes_project 1 31165091 31166784 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098784.1 MGP_WSBEiJ_G0037447.1 mouse_genomes_project 1 113808605 113808741 + Gm22331 snoRNA snoRNA MGP_WSBEiJ_T0000717.1 MGP_WSBEiJ_G0000660.1 mouse_genomes_project 1 180349860 180353416 - TEC TEC MGP_WSBEiJ_T0009364.1 MGP_WSBEiJ_G0007521.1 mouse_genomes_project 1 85949867 85949994 + Mir8096 miRNA miRNA MGP_WSBEiJ_T0005967.1 MGP_WSBEiJ_G0004994.1 mouse_genomes_project 1 196091855 196121650 - Gm32200 lincRNA lincRNA MGP_WSBEiJ_T0002917.1 MGP_WSBEiJ_G0002745.1 mouse_genomes_project 1 194751001 194751965 + Gm28172 antisense antisense MGP_WSBEiJ_T0019977.1 MGP_WSBEiJ_G0015589.1 mouse_genomes_project 1 75003577 75012249 - MGP_WSBEiJ_P0019977 Abcb6 protein_coding protein_coding MGP_WSBEiJ_T0019978.1 MGP_WSBEiJ_G0015589.1 mouse_genomes_project 1 75003579 75012143 - Abcb6 protein_coding retained_intron MGP_WSBEiJ_T0019979.1 MGP_WSBEiJ_G0015589.1 mouse_genomes_project 1 75003618 75004730 - MGP_WSBEiJ_P0019979 Abcb6 protein_coding protein_coding MGP_WSBEiJ_T0019980.1 MGP_WSBEiJ_G0015589.1 mouse_genomes_project 1 75004580 75012143 - Abcb6 protein_coding retained_intron MGP_WSBEiJ_T0019981.1 MGP_WSBEiJ_G0015589.1 mouse_genomes_project 1 75007409 75010806 - Abcb6 protein_coding retained_intron MGP_WSBEiJ_T0019982.1 MGP_WSBEiJ_G0015589.1 mouse_genomes_project 1 75009766 75012233 - Abcb6 protein_coding retained_intron MGP_WSBEiJ_T0000588.1 MGP_WSBEiJ_G0000533.1 mouse_genomes_project 1 131238093 131239052 + TEC TEC MGP_WSBEiJ_T0011852.1 MGP_WSBEiJ_G0009982.1 mouse_genomes_project 1 63483133 63483598 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005595.1 MGP_WSBEiJ_G0004706.1 mouse_genomes_project 1 33653370 33682358 - Gm37068 lincRNA lincRNA MGP_WSBEiJ_T0000481.1 MGP_WSBEiJ_G0000426.1 mouse_genomes_project 1 68227098 68229471 - TEC TEC MGP_WSBEiJ_T0022940.1 MGP_WSBEiJ_G0016202.1 mouse_genomes_project 1 176479766 176481632 + MGP_WSBEiJ_P0022940 Crp protein_coding protein_coding MGP_WSBEiJ_T0022941.1 MGP_WSBEiJ_G0016202.1 mouse_genomes_project 1 176479767 176608749 + Crp protein_coding processed_transcript MGP_WSBEiJ_T0018093.1 MGP_WSBEiJ_G0015222.1 mouse_genomes_project 1 560135 563396 + MGP_WSBEiJ_P0018093 protein_coding protein_coding MGP_WSBEiJ_T0000660.1 MGP_WSBEiJ_G0000603.1 mouse_genomes_project 1 159154004 159157791 - TEC TEC MGP_WSBEiJ_T0019812.1 MGP_WSBEiJ_G0015557.1 mouse_genomes_project 1 74026501 74029346 - MGP_WSBEiJ_P0019812 Cxcr1 protein_coding protein_coding MGP_WSBEiJ_T0019813.1 MGP_WSBEiJ_G0015557.1 mouse_genomes_project 1 74026501 74027952 - MGP_WSBEiJ_P0019813 Cxcr1 protein_coding protein_coding MGP_WSBEiJ_T0019983.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75012709 75024956 - MGP_WSBEiJ_P0019983 Atg9a protein_coding protein_coding MGP_WSBEiJ_T0019984.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75012714 75025226 - MGP_WSBEiJ_P0019984 Atg9a protein_coding protein_coding MGP_WSBEiJ_T0019985.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75012714 75024953 - MGP_WSBEiJ_P0019985 Atg9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019986.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75012714 75023412 - MGP_WSBEiJ_P0019986 Atg9a protein_coding protein_coding MGP_WSBEiJ_T0019987.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75012715 75024953 - MGP_WSBEiJ_P0019987 Atg9a protein_coding protein_coding MGP_WSBEiJ_T0019988.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75016020 75019078 - MGP_WSBEiJ_P0019988 Atg9a protein_coding protein_coding MGP_WSBEiJ_T0019989.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75020586 75024755 - Atg9a protein_coding retained_intron MGP_WSBEiJ_T0019990.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75022798 75024992 - Atg9a protein_coding retained_intron MGP_WSBEiJ_T0019991.1 MGP_WSBEiJ_G0015590.1 mouse_genomes_project 1 75023146 75024744 - MGP_WSBEiJ_P0019991 Atg9a protein_coding protein_coding MGP_WSBEiJ_T0021543.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136594279 136596682 + Cyb5r1 protein_coding processed_transcript MGP_WSBEiJ_T0021544.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136594472 136600434 + MGP_WSBEiJ_P0021544 Cyb5r1 protein_coding protein_coding MGP_WSBEiJ_T0021545.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136594472 136600430 + MGP_WSBEiJ_P0021545 Cyb5r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021546.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136594686 136596294 + Cyb5r1 protein_coding processed_transcript MGP_WSBEiJ_T0021547.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136594694 136596286 + Cyb5r1 protein_coding processed_transcript MGP_WSBEiJ_T0021548.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136594695 136598357 + MGP_WSBEiJ_P0021548 Cyb5r1 protein_coding protein_coding MGP_WSBEiJ_T0021549.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136594711 136597558 + Cyb5r1 protein_coding retained_intron MGP_WSBEiJ_T0021550.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136594719 136598691 + Cyb5r1 protein_coding retained_intron MGP_WSBEiJ_T0021551.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136595004 136599661 + MGP_WSBEiJ_P0021551 Cyb5r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021552.1 MGP_WSBEiJ_G0015918.1 mouse_genomes_project 1 136595004 136596359 + MGP_WSBEiJ_P0021552 Cyb5r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005693.1 MGP_WSBEiJ_G0004776.1 mouse_genomes_project 1 71711732 71769358 - 4930556G22Rik lincRNA lincRNA MGP_WSBEiJ_T0005742.1 MGP_WSBEiJ_G0004814.1 mouse_genomes_project 1 90722880 90728689 + 4930434B07Rik lincRNA lincRNA MGP_WSBEiJ_T0018837.1 MGP_WSBEiJ_G0015365.1 mouse_genomes_project 1 36996924 37040406 - MGP_WSBEiJ_P0018837 Lonrf2 protein_coding protein_coding MGP_WSBEiJ_T0018838.1 MGP_WSBEiJ_G0015365.1 mouse_genomes_project 1 36997777 37024890 - MGP_WSBEiJ_P0018838 Lonrf2 protein_coding protein_coding MGP_WSBEiJ_T0018839.1 MGP_WSBEiJ_G0015365.1 mouse_genomes_project 1 37038869 37040047 - Lonrf2 protein_coding retained_intron MGP_WSBEiJ_T0100404.1 MGP_WSBEiJ_G0038863.1 mouse_genomes_project 1 88549998 88550782 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002827.1 MGP_WSBEiJ_G0002670.1 mouse_genomes_project 1 137055380 137067661 + Gm28892 antisense antisense MGP_WSBEiJ_T0011794.1 MGP_WSBEiJ_G0009924.1 mouse_genomes_project 1 48041105 48042521 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000344.1 MGP_WSBEiJ_G0000292.1 mouse_genomes_project 1 7354007 7355729 - TEC TEC MGP_WSBEiJ_T0022288.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164433021 164448797 + MGP_WSBEiJ_P0022288 Cenpl protein_coding protein_coding MGP_WSBEiJ_T0022289.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164433075 164448415 + MGP_WSBEiJ_P0022289 Cenpl protein_coding protein_coding MGP_WSBEiJ_T0022290.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164433075 164448415 + MGP_WSBEiJ_P0022290 Cenpl protein_coding protein_coding MGP_WSBEiJ_T0022291.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164433200 164448401 + MGP_WSBEiJ_P0022291 Cenpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022292.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164433258 164448401 + MGP_WSBEiJ_P0022292 Cenpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022293.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164433274 164448801 + MGP_WSBEiJ_P0022293 Cenpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022294.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164433293 164445572 + MGP_WSBEiJ_P0022294 Cenpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022295.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164433324 164448415 + MGP_WSBEiJ_P0022295 Cenpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022296.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164434713 164435302 + Cenpl protein_coding processed_transcript MGP_WSBEiJ_T0022297.1 MGP_WSBEiJ_G0016056.1 mouse_genomes_project 1 164438315 164445483 + Cenpl protein_coding processed_transcript MGP_WSBEiJ_T0011710.1 MGP_WSBEiJ_G0009840.1 mouse_genomes_project 1 19684511 19684958 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018425.1 MGP_WSBEiJ_G0015287.1 mouse_genomes_project 1 18150614 18168106 - MGP_WSBEiJ_P0018425 Mcm3 protein_coding protein_coding MGP_WSBEiJ_T0018426.1 MGP_WSBEiJ_G0015287.1 mouse_genomes_project 1 18150619 18168054 - Mcm3 protein_coding retained_intron MGP_WSBEiJ_T0018427.1 MGP_WSBEiJ_G0015287.1 mouse_genomes_project 1 18150652 18151367 - Mcm3 protein_coding retained_intron MGP_WSBEiJ_T0018428.1 MGP_WSBEiJ_G0015287.1 mouse_genomes_project 1 18150811 18152563 - Mcm3 protein_coding retained_intron MGP_WSBEiJ_T0018429.1 MGP_WSBEiJ_G0015287.1 mouse_genomes_project 1 18152326 18153570 - Mcm3 protein_coding retained_intron MGP_WSBEiJ_T0002693.1 MGP_WSBEiJ_G0002571.1 mouse_genomes_project 1 13498356 13504417 + Gm7568 antisense antisense MGP_WSBEiJ_T0002694.1 MGP_WSBEiJ_G0002571.1 mouse_genomes_project 1 13498356 13513641 + Gm7568 antisense antisense MGP_WSBEiJ_T0002695.1 MGP_WSBEiJ_G0002571.1 mouse_genomes_project 1 13498393 13504413 + Gm7568 antisense antisense MGP_WSBEiJ_T0100205.1 MGP_WSBEiJ_G0038764.1 mouse_genomes_project 1 97777791 97873481 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100206.1 MGP_WSBEiJ_G0038764.1 mouse_genomes_project 1 97795706 97873141 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0011904.1 MGP_WSBEiJ_G0010034.1 mouse_genomes_project 1 89221144 89221607 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002790.1 MGP_WSBEiJ_G0002646.1 mouse_genomes_project 1 93671880 93693527 - 9430060I03Rik antisense antisense MGP_WSBEiJ_T0011712.1 MGP_WSBEiJ_G0009842.1 mouse_genomes_project 1 20424523 20426459 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012094.1 MGP_WSBEiJ_G0010224.1 mouse_genomes_project 1 174569203 174569861 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002848.1 MGP_WSBEiJ_G0002688.1 mouse_genomes_project 1 158311348 158313289 + Gm37622 antisense antisense MGP_WSBEiJ_T0009408.1 MGP_WSBEiJ_G0007565.1 mouse_genomes_project 1 180868890 180868970 + Gm25993 miRNA miRNA MGP_WSBEiJ_T0020107.1 MGP_WSBEiJ_G0015603.1 mouse_genomes_project 1 75288314 75311816 + MGP_WSBEiJ_P0020107 Asic4 protein_coding protein_coding MGP_WSBEiJ_T0020108.1 MGP_WSBEiJ_G0015603.1 mouse_genomes_project 1 75288577 75311819 + MGP_WSBEiJ_P0020108 Asic4 protein_coding protein_coding MGP_WSBEiJ_T0018679.1 MGP_WSBEiJ_G0015338.1 mouse_genomes_project 1 34533831 34571887 + MGP_WSBEiJ_P0018679 Cnnm4 protein_coding protein_coding MGP_WSBEiJ_T0018680.1 MGP_WSBEiJ_G0015338.1 mouse_genomes_project 1 34534155 34535527 + Cnnm4 protein_coding retained_intron MGP_WSBEiJ_T0018301.1 MGP_WSBEiJ_G0015255.1 mouse_genomes_project 1 10028126 10161437 - MGP_WSBEiJ_P0018301 Slco5a1 protein_coding protein_coding MGP_WSBEiJ_T0018302.1 MGP_WSBEiJ_G0015255.1 mouse_genomes_project 1 10040181 10159967 - MGP_WSBEiJ_P0018302 Slco5a1 protein_coding protein_coding MGP_WSBEiJ_T0018303.1 MGP_WSBEiJ_G0015255.1 mouse_genomes_project 1 10042916 10090283 - Slco5a1 protein_coding processed_transcript MGP_WSBEiJ_T0018304.1 MGP_WSBEiJ_G0015255.1 mouse_genomes_project 1 10142981 10160009 - Slco5a1 protein_coding processed_transcript MGP_WSBEiJ_T0097240.1 MGP_WSBEiJ_G0035921.1 mouse_genomes_project 1 69259708 69261572 - Gm28112 sense_intronic sense_intronic MGP_WSBEiJ_T0002936.1 MGP_WSBEiJ_G0002757.1 mouse_genomes_project 1 197985635 197986765 - Gm37650 antisense antisense MGP_WSBEiJ_T0100405.1 MGP_WSBEiJ_G0038864.1 mouse_genomes_project 1 88583767 88584625 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011654.1 MGP_WSBEiJ_G0009784.1 mouse_genomes_project 1 2653105 2653499 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002771.1 MGP_WSBEiJ_G0002628.1 mouse_genomes_project 1 75108695 75111739 + Gm28902 antisense antisense MGP_WSBEiJ_T0097256.1 MGP_WSBEiJ_G0035936.1 mouse_genomes_project 1 168711162 168715934 - Gm38190 sense_intronic sense_intronic MGP_WSBEiJ_T0009383.1 MGP_WSBEiJ_G0007540.1 mouse_genomes_project 1 134229892 134229989 + Mir135b miRNA miRNA MGP_WSBEiJ_T0100395.1 MGP_WSBEiJ_G0038854.1 mouse_genomes_project 1 64790195 64790363 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000511.1 MGP_WSBEiJ_G0000456.1 mouse_genomes_project 1 83575396 83576199 - TEC TEC MGP_WSBEiJ_T0002872.1 MGP_WSBEiJ_G0002707.1 mouse_genomes_project 1 169354868 169355758 - Gm37469 antisense antisense MGP_WSBEiJ_T0009373.1 MGP_WSBEiJ_G0007530.1 mouse_genomes_project 1 94110418 94110546 + Mir6345 miRNA miRNA MGP_WSBEiJ_T0002720.1 MGP_WSBEiJ_G0002592.1 mouse_genomes_project 1 36575990 36587154 + Gm16152 antisense antisense MGP_WSBEiJ_T0002721.1 MGP_WSBEiJ_G0002592.1 mouse_genomes_project 1 36579397 36580827 + Gm16152 antisense antisense MGP_WSBEiJ_T0020436.1 MGP_WSBEiJ_G0015673.1 mouse_genomes_project 1 87495531 87500624 + MGP_WSBEiJ_P0020436 Prss56 protein_coding protein_coding MGP_WSBEiJ_T0011051.1 MGP_WSBEiJ_G0009208.1 mouse_genomes_project 1 48936373 48936505 - Gm27330 misc_RNA misc_RNA MGP_WSBEiJ_T0011939.1 MGP_WSBEiJ_G0010069.1 mouse_genomes_project 1 107096726 107097261 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097514.1 MGP_WSBEiJ_G0036177.1 mouse_genomes_project 1 125211 125321 + Gm26206 snRNA snRNA MGP_WSBEiJ_T0097543.1 MGP_WSBEiJ_G0036206.1 mouse_genomes_project 1 64345706 64345862 - Gm24788 snRNA snRNA MGP_WSBEiJ_T0005677.1 MGP_WSBEiJ_G0004763.1 mouse_genomes_project 1 63289967 63294231 + Gm13749 lincRNA lincRNA MGP_WSBEiJ_T0020791.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94165292 94240794 - MGP_WSBEiJ_P0020791 Hdlbp protein_coding protein_coding MGP_WSBEiJ_T0020792.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94167114 94206699 - MGP_WSBEiJ_P0020792 Hdlbp protein_coding protein_coding MGP_WSBEiJ_T0020793.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94167354 94201810 - MGP_WSBEiJ_P0020793 Hdlbp protein_coding protein_coding MGP_WSBEiJ_T0020794.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94188832 94206665 - Hdlbp protein_coding retained_intron MGP_WSBEiJ_T0020795.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94191282 94206695 - MGP_WSBEiJ_P0020795 Hdlbp protein_coding protein_coding MGP_WSBEiJ_T0020796.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94191699 94201979 - MGP_WSBEiJ_P0020796 Hdlbp protein_coding protein_coding MGP_WSBEiJ_T0020797.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94198134 94206445 - MGP_WSBEiJ_P0020797 Hdlbp protein_coding protein_coding MGP_WSBEiJ_T0020798.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94198170 94240808 - MGP_WSBEiJ_P0020798 Hdlbp protein_coding protein_coding MGP_WSBEiJ_T0020799.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94201315 94206662 - Hdlbp protein_coding retained_intron MGP_WSBEiJ_T0020800.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94201705 94240370 - MGP_WSBEiJ_P0020800 Hdlbp protein_coding protein_coding MGP_WSBEiJ_T0020801.1 MGP_WSBEiJ_G0015751.1 mouse_genomes_project 1 94237156 94240373 - Hdlbp protein_coding retained_intron MGP_WSBEiJ_T0097572.1 MGP_WSBEiJ_G0036235.1 mouse_genomes_project 1 133075338 133075432 - Gm25549 snRNA snRNA MGP_WSBEiJ_T0009318.1 MGP_WSBEiJ_G0007475.1 mouse_genomes_project 1 5906255 5906365 + Gm24276 miRNA miRNA MGP_WSBEiJ_T0000677.1 MGP_WSBEiJ_G0000620.1 mouse_genomes_project 1 163531647 163533521 + TEC TEC MGP_WSBEiJ_T0018969.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42475873 42491545 + protein_coding processed_transcript MGP_WSBEiJ_T0018970.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42476233 42547505 + MGP_WSBEiJ_P0018970 protein_coding protein_coding MGP_WSBEiJ_T0018971.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42476240 42499138 + protein_coding retained_intron MGP_WSBEiJ_T0018972.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42476241 42499138 + protein_coding retained_intron MGP_WSBEiJ_T0018973.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42476241 42547534 + MGP_WSBEiJ_P0018973 protein_coding protein_coding MGP_WSBEiJ_T0018974.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42476259 42533556 + MGP_WSBEiJ_P0018974 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018975.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42476271 42533537 + MGP_WSBEiJ_P0018975 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018976.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42513429 42519406 + MGP_WSBEiJ_P0018976 protein_coding protein_coding MGP_WSBEiJ_T0018977.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42525298 42547534 + MGP_WSBEiJ_P0018977 protein_coding protein_coding MGP_WSBEiJ_T0018978.1 MGP_WSBEiJ_G0015397.1 mouse_genomes_project 1 42545362 42546870 + protein_coding retained_intron MGP_WSBEiJ_T0020890.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98709535 98757199 - MGP_WSBEiJ_P0020890 Pam protein_coding protein_coding MGP_WSBEiJ_T0020891.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98736366 99019602 - MGP_WSBEiJ_P0020891 Pam protein_coding protein_coding MGP_WSBEiJ_T0020892.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98736367 99019613 - MGP_WSBEiJ_P0020892 Pam protein_coding protein_coding MGP_WSBEiJ_T0020893.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98736372 98895324 - MGP_WSBEiJ_P0020893 Pam protein_coding protein_coding MGP_WSBEiJ_T0020894.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98736981 98756777 - MGP_WSBEiJ_P0020894 Pam protein_coding protein_coding MGP_WSBEiJ_T0020895.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98737241 98750065 - Pam protein_coding retained_intron MGP_WSBEiJ_T0020896.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98738035 98741428 - Pam protein_coding processed_transcript MGP_WSBEiJ_T0020897.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98741101 98757269 - Pam protein_coding retained_intron MGP_WSBEiJ_T0020898.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98752941 98756779 - Pam protein_coding retained_intron MGP_WSBEiJ_T0020899.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98769269 98780916 - Pam protein_coding retained_intron MGP_WSBEiJ_T0020900.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98770976 98808190 - MGP_WSBEiJ_P0020900 Pam protein_coding protein_coding MGP_WSBEiJ_T0020901.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98848103 98895137 - Pam protein_coding retained_intron MGP_WSBEiJ_T0020902.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98874284 98895313 - Pam protein_coding processed_transcript MGP_WSBEiJ_T0020903.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98975413 98979306 - Pam protein_coding retained_intron MGP_WSBEiJ_T0020904.1 MGP_WSBEiJ_G0015773.1 mouse_genomes_project 1 98979395 99019627 - Pam protein_coding processed_transcript MGP_WSBEiJ_T0021107.1 MGP_WSBEiJ_G0015820.1 mouse_genomes_project 1 122089337 122094917 + MGP_WSBEiJ_P0021107 En1 protein_coding protein_coding MGP_WSBEiJ_T0011942.1 MGP_WSBEiJ_G0010072.1 mouse_genomes_project 1 108037552 108039877 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098783.1 MGP_WSBEiJ_G0037446.1 mouse_genomes_project 1 110876218 110876348 - Gm22159 snoRNA snoRNA MGP_WSBEiJ_T0020039.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071168 75080440 + MGP_WSBEiJ_P0020039 Dnajb2 protein_coding protein_coding MGP_WSBEiJ_T0020040.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071222 75079556 + MGP_WSBEiJ_P0020040 Dnajb2 protein_coding protein_coding MGP_WSBEiJ_T0020041.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071222 75079556 + MGP_WSBEiJ_P0020041 Dnajb2 protein_coding protein_coding MGP_WSBEiJ_T0020042.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071226 75080444 + MGP_WSBEiJ_P0020042 Dnajb2 protein_coding protein_coding MGP_WSBEiJ_T0020043.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071244 75080442 + MGP_WSBEiJ_P0020043 Dnajb2 protein_coding protein_coding MGP_WSBEiJ_T0020044.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071270 75079807 + MGP_WSBEiJ_P0020044 Dnajb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020045.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071313 75080442 + MGP_WSBEiJ_P0020045 Dnajb2 protein_coding protein_coding MGP_WSBEiJ_T0020046.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071371 75074092 + MGP_WSBEiJ_P0020046 Dnajb2 protein_coding protein_coding MGP_WSBEiJ_T0020047.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071529 75072439 + Dnajb2 protein_coding retained_intron MGP_WSBEiJ_T0020048.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75071832 75072282 + Dnajb2 protein_coding retained_intron MGP_WSBEiJ_T0020049.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75073682 75075679 + Dnajb2 protein_coding retained_intron MGP_WSBEiJ_T0020050.1 MGP_WSBEiJ_G0015596.1 mouse_genomes_project 1 75076166 75079679 + MGP_WSBEiJ_P0020050 Dnajb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011906.1 MGP_WSBEiJ_G0010036.1 mouse_genomes_project 1 89571336 89571579 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002734.1 MGP_WSBEiJ_G0002603.1 mouse_genomes_project 1 49888495 49891445 - Gm28319 antisense antisense MGP_WSBEiJ_T0100390.1 MGP_WSBEiJ_G0038849.1 mouse_genomes_project 1 52141723 52146455 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0019154.1 MGP_WSBEiJ_G0015429.1 mouse_genomes_project 1 51848403 51856200 + MGP_WSBEiJ_P0019154 Mstn protein_coding protein_coding MGP_WSBEiJ_T0019155.1 MGP_WSBEiJ_G0015429.1 mouse_genomes_project 1 51848420 51856166 + MGP_WSBEiJ_P0019155 Mstn protein_coding protein_coding MGP_WSBEiJ_T0000685.1 MGP_WSBEiJ_G0000628.1 mouse_genomes_project 1 164102311 164106303 + TEC TEC MGP_WSBEiJ_T0000438.1 MGP_WSBEiJ_G0000383.1 mouse_genomes_project 1 46050215 46052159 - TEC TEC MGP_WSBEiJ_T0002777.1 MGP_WSBEiJ_G0002633.1 mouse_genomes_project 1 86139562 86143648 - Gm28884 antisense antisense MGP_WSBEiJ_T0100417.1 MGP_WSBEiJ_G0038876.1 mouse_genomes_project 1 108508023 108510022 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005878.1 MGP_WSBEiJ_G0004924.1 mouse_genomes_project 1 167587659 167591348 - Gm16548 lincRNA lincRNA MGP_WSBEiJ_T0023518.1 MGP_WSBEiJ_G0016344.1 mouse_genomes_project 1 195689085 195703204 + MGP_WSBEiJ_P0023518 Nsl1 protein_coding protein_coding MGP_WSBEiJ_T0023519.1 MGP_WSBEiJ_G0016344.1 mouse_genomes_project 1 195689097 195704937 + MGP_WSBEiJ_P0023519 Nsl1 protein_coding protein_coding MGP_WSBEiJ_T0023520.1 MGP_WSBEiJ_G0016344.1 mouse_genomes_project 1 195689104 195714817 + MGP_WSBEiJ_P0023520 Nsl1 protein_coding protein_coding MGP_WSBEiJ_T0021836.1 MGP_WSBEiJ_G0015976.1 mouse_genomes_project 1 146721755 146761999 - MGP_WSBEiJ_P0021836 Rgs13 protein_coding protein_coding MGP_WSBEiJ_T0021837.1 MGP_WSBEiJ_G0015976.1 mouse_genomes_project 1 146721768 146761902 - MGP_WSBEiJ_P0021837 Rgs13 protein_coding protein_coding MGP_WSBEiJ_T0097575.1 MGP_WSBEiJ_G0036238.1 mouse_genomes_project 1 137635924 137636030 - Gm22796 snRNA snRNA MGP_WSBEiJ_T0022599.1 MGP_WSBEiJ_G0016123.1 mouse_genomes_project 1 171111654 171153888 + MGP_WSBEiJ_P0022599 Rxrg protein_coding protein_coding MGP_WSBEiJ_T0000409.1 MGP_WSBEiJ_G0000354.1 mouse_genomes_project 1 31678122 31678463 + TEC TEC MGP_WSBEiJ_T0018591.1 MGP_WSBEiJ_G0015322.1 mouse_genomes_project 1 32402980 32412686 + MGP_WSBEiJ_P0018591 Imp4 protein_coding protein_coding MGP_WSBEiJ_T0018592.1 MGP_WSBEiJ_G0015322.1 mouse_genomes_project 1 32403027 32405395 + Imp4 protein_coding retained_intron MGP_WSBEiJ_T0018593.1 MGP_WSBEiJ_G0015322.1 mouse_genomes_project 1 32403034 32407178 + MGP_WSBEiJ_P0018593 Imp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018594.1 MGP_WSBEiJ_G0015322.1 mouse_genomes_project 1 32403034 32407709 + MGP_WSBEiJ_P0018594 Imp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018595.1 MGP_WSBEiJ_G0015322.1 mouse_genomes_project 1 32403066 32407349 + Imp4 protein_coding processed_transcript MGP_WSBEiJ_T0018596.1 MGP_WSBEiJ_G0015322.1 mouse_genomes_project 1 32403082 32406761 + Imp4 protein_coding processed_transcript MGP_WSBEiJ_T0018597.1 MGP_WSBEiJ_G0015322.1 mouse_genomes_project 1 32403170 32407836 + MGP_WSBEiJ_P0018597 Imp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018598.1 MGP_WSBEiJ_G0015322.1 mouse_genomes_project 1 32411576 32412270 + Imp4 protein_coding processed_transcript MGP_WSBEiJ_T0021695.1 MGP_WSBEiJ_G0015948.1 mouse_genomes_project 1 138451284 138499052 + MGP_WSBEiJ_P0021695 Kif21b protein_coding protein_coding MGP_WSBEiJ_T0021696.1 MGP_WSBEiJ_G0015948.1 mouse_genomes_project 1 138451349 138471048 + Kif21b protein_coding retained_intron MGP_WSBEiJ_T0021697.1 MGP_WSBEiJ_G0015948.1 mouse_genomes_project 1 138451617 138499062 + MGP_WSBEiJ_P0021697 Kif21b protein_coding unknown_likely_coding MGP_WSBEiJ_T0021698.1 MGP_WSBEiJ_G0015948.1 mouse_genomes_project 1 138481399 138486114 + MGP_WSBEiJ_P0021698 Kif21b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021699.1 MGP_WSBEiJ_G0015948.1 mouse_genomes_project 1 138483987 138485900 + Kif21b protein_coding retained_intron MGP_WSBEiJ_T0021700.1 MGP_WSBEiJ_G0015948.1 mouse_genomes_project 1 138490368 138493354 + Kif21b protein_coding processed_transcript MGP_WSBEiJ_T0002830.1 MGP_WSBEiJ_G0002673.1 mouse_genomes_project 1 137525118 137542906 + Gm26642 antisense antisense MGP_WSBEiJ_T0022582.1 MGP_WSBEiJ_G0016118.1 mouse_genomes_project 1 170701305 170768094 - MGP_WSBEiJ_P0022582 Uck2 protein_coding protein_coding MGP_WSBEiJ_T0022583.1 MGP_WSBEiJ_G0016118.1 mouse_genomes_project 1 170704272 170767658 - MGP_WSBEiJ_P0022583 Uck2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022584.1 MGP_WSBEiJ_G0016118.1 mouse_genomes_project 1 170704658 170715247 - MGP_WSBEiJ_P0022584 Uck2 protein_coding protein_coding MGP_WSBEiJ_T0022585.1 MGP_WSBEiJ_G0016118.1 mouse_genomes_project 1 170704763 170722601 - MGP_WSBEiJ_P0022585 Uck2 protein_coding protein_coding MGP_WSBEiJ_T0022586.1 MGP_WSBEiJ_G0016118.1 mouse_genomes_project 1 170708304 170767375 - MGP_WSBEiJ_P0022586 Uck2 protein_coding protein_coding MGP_WSBEiJ_T0022587.1 MGP_WSBEiJ_G0016118.1 mouse_genomes_project 1 170713103 170767652 - MGP_WSBEiJ_P0022587 Uck2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022588.1 MGP_WSBEiJ_G0016118.1 mouse_genomes_project 1 170715893 170767481 - Uck2 protein_coding processed_transcript MGP_WSBEiJ_T0097245.1 MGP_WSBEiJ_G0035925.1 mouse_genomes_project 1 92519035 92520506 + Gm29101 sense_intronic sense_intronic MGP_WSBEiJ_T0011053.1 MGP_WSBEiJ_G0009210.1 mouse_genomes_project 1 58756796 58756881 + Gm24545 misc_RNA misc_RNA MGP_WSBEiJ_T0021307.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133294278 133533028 - MGP_WSBEiJ_P0021307 Srgap2 protein_coding protein_coding MGP_WSBEiJ_T0021308.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133298392 133309487 - MGP_WSBEiJ_P0021308 Srgap2 protein_coding protein_coding MGP_WSBEiJ_T0021309.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133304013 133334557 - Srgap2 protein_coding processed_transcript MGP_WSBEiJ_T0021310.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133304244 133533028 - MGP_WSBEiJ_P0021310 Srgap2 protein_coding protein_coding MGP_WSBEiJ_T0021311.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133304245 133313242 - Srgap2 protein_coding processed_transcript MGP_WSBEiJ_T0021312.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133304247 133345997 - MGP_WSBEiJ_P0021312 Srgap2 protein_coding protein_coding MGP_WSBEiJ_T0021313.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133304782 133305407 - Srgap2 protein_coding processed_transcript MGP_WSBEiJ_T0021314.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133305342 133533765 - MGP_WSBEiJ_P0021314 Srgap2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021315.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133305667 133368445 - MGP_WSBEiJ_P0021315 Srgap2 protein_coding protein_coding MGP_WSBEiJ_T0021316.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133321646 133333750 - Srgap2 protein_coding retained_intron MGP_WSBEiJ_T0021317.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133366406 133533033 - Srgap2 protein_coding retained_intron MGP_WSBEiJ_T0021318.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133411465 133519868 - MGP_WSBEiJ_P0021318 Srgap2 protein_coding protein_coding MGP_WSBEiJ_T0021319.1 MGP_WSBEiJ_G0015864.1 mouse_genomes_project 1 133436369 133509355 - MGP_WSBEiJ_P0021319 Srgap2 protein_coding protein_coding MGP_WSBEiJ_T0000443.1 MGP_WSBEiJ_G0000388.1 mouse_genomes_project 1 53368570 53369999 - TEC TEC MGP_WSBEiJ_T0020750.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93759482 93851805 - MGP_WSBEiJ_P0020750 Kif1a protein_coding protein_coding MGP_WSBEiJ_T0020751.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93761765 93851814 - MGP_WSBEiJ_P0020751 Kif1a protein_coding protein_coding MGP_WSBEiJ_T0020752.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93761954 93851934 - MGP_WSBEiJ_P0020752 Kif1a protein_coding protein_coding MGP_WSBEiJ_T0020753.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93762294 93851830 - MGP_WSBEiJ_P0020753 Kif1a protein_coding protein_coding MGP_WSBEiJ_T0020754.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93762471 93830482 - MGP_WSBEiJ_P0020754 Kif1a protein_coding protein_coding MGP_WSBEiJ_T0020755.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93766339 93768727 - MGP_WSBEiJ_P0020755 Kif1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020756.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93767511 93771223 - Kif1a protein_coding retained_intron MGP_WSBEiJ_T0020757.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93783022 93851829 - Kif1a protein_coding processed_transcript MGP_WSBEiJ_T0020758.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93786477 93799592 - MGP_WSBEiJ_P0020758 Kif1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020759.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93814196 93816838 - Kif1a protein_coding processed_transcript MGP_WSBEiJ_T0020760.1 MGP_WSBEiJ_G0015742.1 mouse_genomes_project 1 93825784 93851817 - MGP_WSBEiJ_P0020760 Kif1a protein_coding protein_coding MGP_WSBEiJ_T0020554.1 MGP_WSBEiJ_G0015697.1 mouse_genomes_project 1 89168188 89198217 - MGP_WSBEiJ_P0020554 Arl4c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020555.1 MGP_WSBEiJ_G0015697.1 mouse_genomes_project 1 89168190 89198217 - MGP_WSBEiJ_P0020555 Arl4c protein_coding protein_coding MGP_WSBEiJ_T0020556.1 MGP_WSBEiJ_G0015697.1 mouse_genomes_project 1 89194563 89198562 - MGP_WSBEiJ_P0020556 Arl4c protein_coding protein_coding MGP_WSBEiJ_T0011816.1 MGP_WSBEiJ_G0009946.1 mouse_genomes_project 1 54047166 54047441 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020970.1 MGP_WSBEiJ_G0015791.1 mouse_genomes_project 1 108484107 108487964 - MGP_WSBEiJ_P0020970 protein_coding protein_coding MGP_WSBEiJ_T0005932.1 MGP_WSBEiJ_G0004968.1 mouse_genomes_project 1 188213338 188214164 + Gm38108 lincRNA lincRNA MGP_WSBEiJ_T0022467.1 MGP_WSBEiJ_G0016095.1 mouse_genomes_project 1 168388980 168392864 - MGP_WSBEiJ_P0022467 Xcl1 protein_coding protein_coding MGP_WSBEiJ_T0002839.1 MGP_WSBEiJ_G0002682.1 mouse_genomes_project 1 153163691 153187177 - 2310030A07Rik antisense antisense MGP_WSBEiJ_T0005684.1 MGP_WSBEiJ_G0004770.1 mouse_genomes_project 1 67531431 67532952 + Gm15671 lincRNA lincRNA MGP_WSBEiJ_T0018820.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36227328 36303455 - MGP_WSBEiJ_P0018820 Rev1 protein_coding protein_coding MGP_WSBEiJ_T0018821.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36227338 36262912 - Rev1 protein_coding retained_intron MGP_WSBEiJ_T0018822.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36227842 36228793 - Rev1 protein_coding retained_intron MGP_WSBEiJ_T0018823.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36231062 36232246 - Rev1 protein_coding retained_intron MGP_WSBEiJ_T0018824.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36241904 36258563 - MGP_WSBEiJ_P0018824 Rev1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018825.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36245672 36260434 - MGP_WSBEiJ_P0018825 Rev1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018826.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36249433 36256141 - Rev1 protein_coding processed_transcript MGP_WSBEiJ_T0018827.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36253857 36258629 - Rev1 protein_coding retained_intron MGP_WSBEiJ_T0018828.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36267994 36302094 - MGP_WSBEiJ_P0018828 Rev1 protein_coding protein_coding MGP_WSBEiJ_T0018829.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36272676 36302110 - MGP_WSBEiJ_P0018829 Rev1 protein_coding protein_coding MGP_WSBEiJ_T0018830.1 MGP_WSBEiJ_G0015363.1 mouse_genomes_project 1 36281444 36303594 - MGP_WSBEiJ_P0018830 Rev1 protein_coding protein_coding MGP_WSBEiJ_T0100411.1 MGP_WSBEiJ_G0038870.1 mouse_genomes_project 1 103182530 103183734 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0023391.1 MGP_WSBEiJ_G0016321.1 mouse_genomes_project 1 189673645 189699782 + MGP_WSBEiJ_P0023391 Bpnt1 protein_coding protein_coding MGP_WSBEiJ_T0023392.1 MGP_WSBEiJ_G0016321.1 mouse_genomes_project 1 189673662 189698632 + MGP_WSBEiJ_P0023392 Bpnt1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023393.1 MGP_WSBEiJ_G0016321.1 mouse_genomes_project 1 189673669 189687018 + MGP_WSBEiJ_P0023393 Bpnt1 protein_coding protein_coding MGP_WSBEiJ_T0023394.1 MGP_WSBEiJ_G0016321.1 mouse_genomes_project 1 189673676 189698787 + MGP_WSBEiJ_P0023394 Bpnt1 protein_coding protein_coding MGP_WSBEiJ_T0023395.1 MGP_WSBEiJ_G0016321.1 mouse_genomes_project 1 189673703 189688439 + Bpnt1 protein_coding processed_transcript MGP_WSBEiJ_T0009380.1 MGP_WSBEiJ_G0007537.1 mouse_genomes_project 1 120368683 120368764 + Mir6346 miRNA miRNA MGP_WSBEiJ_T0005924.1 MGP_WSBEiJ_G0004961.1 mouse_genomes_project 1 186136210 186137826 - Gm5533 lincRNA lincRNA MGP_WSBEiJ_T0019708.1 MGP_WSBEiJ_G0015535.1 mouse_genomes_project 1 67539367 68670430 - MGP_WSBEiJ_P0019708 Erbb4 protein_coding protein_coding MGP_WSBEiJ_T0019709.1 MGP_WSBEiJ_G0015535.1 mouse_genomes_project 1 67539367 68670733 - MGP_WSBEiJ_P0019709 Erbb4 protein_coding protein_coding MGP_WSBEiJ_T0019710.1 MGP_WSBEiJ_G0015535.1 mouse_genomes_project 1 67778258 68670430 - MGP_WSBEiJ_P0019710 Erbb4 protein_coding protein_coding MGP_WSBEiJ_T0019711.1 MGP_WSBEiJ_G0015535.1 mouse_genomes_project 1 67812675 67820953 - Erbb4 protein_coding processed_transcript MGP_WSBEiJ_T0019712.1 MGP_WSBEiJ_G0015535.1 mouse_genomes_project 1 67820784 67854611 - Erbb4 protein_coding retained_intron MGP_WSBEiJ_T0097577.1 MGP_WSBEiJ_G0036240.1 mouse_genomes_project 1 139359825 139359885 - Gm23763 snRNA snRNA MGP_WSBEiJ_T0021252.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132652592 132679148 - MGP_WSBEiJ_P0021252 protein_coding protein_coding MGP_WSBEiJ_T0021253.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132652599 132655661 - protein_coding retained_intron MGP_WSBEiJ_T0021254.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132653687 132694915 - MGP_WSBEiJ_P0021254 protein_coding protein_coding MGP_WSBEiJ_T0021255.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132654424 132679149 - MGP_WSBEiJ_P0021255 protein_coding protein_coding MGP_WSBEiJ_T0021256.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132654424 132679149 - MGP_WSBEiJ_P0021256 protein_coding protein_coding MGP_WSBEiJ_T0021257.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132662254 132679148 - MGP_WSBEiJ_P0021257 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021258.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132662254 132679148 - MGP_WSBEiJ_P0021258 protein_coding protein_coding MGP_WSBEiJ_T0021259.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132662254 132679148 - MGP_WSBEiJ_P0021259 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021260.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132662442 132680461 - MGP_WSBEiJ_P0021260 protein_coding protein_coding MGP_WSBEiJ_T0021261.1 MGP_WSBEiJ_G0015849.1 mouse_genomes_project 1 132672122 132681875 - MGP_WSBEiJ_P0021261 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000643.1 MGP_WSBEiJ_G0000586.1 mouse_genomes_project 1 152225944 152227399 - TEC TEC MGP_WSBEiJ_T0005811.1 MGP_WSBEiJ_G0004870.1 mouse_genomes_project 1 132176818 132188327 - Gm16081 lincRNA lincRNA MGP_WSBEiJ_T0000744.1 MGP_WSBEiJ_G0000686.1 mouse_genomes_project 1 186726038 186726795 - TEC TEC MGP_WSBEiJ_T0000745.1 MGP_WSBEiJ_G0000686.1 mouse_genomes_project 1 186726392 186726794 - TEC TEC MGP_WSBEiJ_T0000700.1 MGP_WSBEiJ_G0000643.1 mouse_genomes_project 1 168954347 168955381 + TEC TEC MGP_WSBEiJ_T0005862.1 MGP_WSBEiJ_G0004912.1 mouse_genomes_project 1 158076654 158126645 - Gm29282 lincRNA lincRNA MGP_WSBEiJ_T0000528.1 MGP_WSBEiJ_G0000473.1 mouse_genomes_project 1 88254860 88257846 + TEC TEC MGP_WSBEiJ_T0023359.1 MGP_WSBEiJ_G0016312.1 mouse_genomes_project 1 188301220 188328680 + MGP_WSBEiJ_P0023359 Dusp10 protein_coding protein_coding MGP_WSBEiJ_T0023362.1 MGP_WSBEiJ_G0016312.1 mouse_genomes_project 1 188323805 188369806 + MGP_WSBEiJ_P0023362 Dusp10 protein_coding protein_coding MGP_WSBEiJ_T0100383.1 MGP_WSBEiJ_G0038842.1 mouse_genomes_project 1 15532413 15543478 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0022839.1 MGP_WSBEiJ_G0016180.1 mouse_genomes_project 1 175743449 175772206 - MGP_WSBEiJ_P0022839 Vangl2 protein_coding protein_coding MGP_WSBEiJ_T0022840.1 MGP_WSBEiJ_G0016180.1 mouse_genomes_project 1 175743449 175771054 - MGP_WSBEiJ_P0022840 Vangl2 protein_coding protein_coding MGP_WSBEiJ_T0022841.1 MGP_WSBEiJ_G0016180.1 mouse_genomes_project 1 175746791 175771054 - MGP_WSBEiJ_P0022841 Vangl2 protein_coding protein_coding MGP_WSBEiJ_T0022842.1 MGP_WSBEiJ_G0016180.1 mouse_genomes_project 1 175747131 175752986 - Vangl2 protein_coding processed_transcript MGP_WSBEiJ_T0022843.1 MGP_WSBEiJ_G0016180.1 mouse_genomes_project 1 175753790 175770466 - MGP_WSBEiJ_P0022843 Vangl2 protein_coding protein_coding MGP_WSBEiJ_T0022844.1 MGP_WSBEiJ_G0016180.1 mouse_genomes_project 1 175753873 175771027 - MGP_WSBEiJ_P0022844 Vangl2 protein_coding protein_coding MGP_WSBEiJ_T0016383.1 MGP_WSBEiJ_G0014508.1 mouse_genomes_project 1 32117672 32130909 - Gm26788 processed_transcript antisense MGP_WSBEiJ_T0016384.1 MGP_WSBEiJ_G0014508.1 mouse_genomes_project 1 32127666 32131084 - Gm26788 processed_transcript retained_intron MGP_WSBEiJ_T0005809.1 MGP_WSBEiJ_G0004869.1 mouse_genomes_project 1 128634247 128638559 - 4930599A14Rik lincRNA lincRNA MGP_WSBEiJ_T0005810.1 MGP_WSBEiJ_G0004869.1 mouse_genomes_project 1 128636746 128638585 - 4930599A14Rik lincRNA lincRNA MGP_WSBEiJ_T0100438.1 MGP_WSBEiJ_G0038897.1 mouse_genomes_project 1 178321603 178322708 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005844.1 MGP_WSBEiJ_G0004898.1 mouse_genomes_project 1 141865114 141871412 + Gm34816 lincRNA lincRNA MGP_WSBEiJ_T0011682.1 MGP_WSBEiJ_G0009812.1 mouse_genomes_project 1 8751280 8751542 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005827.1 MGP_WSBEiJ_G0004886.1 mouse_genomes_project 1 138915894 138918426 - Gm33994 lincRNA lincRNA MGP_WSBEiJ_T0009374.1 MGP_WSBEiJ_G0007531.1 mouse_genomes_project 1 97122928 97123019 - Gm24586 miRNA miRNA MGP_WSBEiJ_T0011797.1 MGP_WSBEiJ_G0009927.1 mouse_genomes_project 1 48891697 48892433 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005877.1 MGP_WSBEiJ_G0004923.1 mouse_genomes_project 1 167019093 167022007 + Gm29500 lincRNA lincRNA MGP_WSBEiJ_T0097565.1 MGP_WSBEiJ_G0036228.1 mouse_genomes_project 1 120088979 120089109 + Gm23497 snRNA snRNA MGP_WSBEiJ_T0009339.1 MGP_WSBEiJ_G0007496.1 mouse_genomes_project 1 46085190 46085295 - Mir6350 miRNA miRNA MGP_WSBEiJ_T0022924.1 MGP_WSBEiJ_G0016197.1 mouse_genomes_project 1 176285950 176289412 + Cfap45 protein_coding retained_intron MGP_WSBEiJ_T0022925.1 MGP_WSBEiJ_G0016197.1 mouse_genomes_project 1 176286193 176310866 + MGP_WSBEiJ_P0022925 Cfap45 protein_coding protein_coding MGP_WSBEiJ_T0022926.1 MGP_WSBEiJ_G0016197.1 mouse_genomes_project 1 176286285 176297783 + Cfap45 protein_coding retained_intron MGP_WSBEiJ_T0022927.1 MGP_WSBEiJ_G0016197.1 mouse_genomes_project 1 176286288 176297677 + MGP_WSBEiJ_P0022927 Cfap45 protein_coding protein_coding MGP_WSBEiJ_T0022928.1 MGP_WSBEiJ_G0016197.1 mouse_genomes_project 1 176286330 176297654 + MGP_WSBEiJ_P0022928 Cfap45 protein_coding protein_coding MGP_WSBEiJ_T0022929.1 MGP_WSBEiJ_G0016197.1 mouse_genomes_project 1 176291242 176297737 + MGP_WSBEiJ_P0022929 Cfap45 protein_coding protein_coding MGP_WSBEiJ_T0022930.1 MGP_WSBEiJ_G0016197.1 mouse_genomes_project 1 176291603 176297737 + MGP_WSBEiJ_P0022930 Cfap45 protein_coding protein_coding MGP_WSBEiJ_T0022931.1 MGP_WSBEiJ_G0016197.1 mouse_genomes_project 1 176302668 176305642 + MGP_WSBEiJ_P0022931 Cfap45 protein_coding protein_coding MGP_WSBEiJ_T0000758.1 MGP_WSBEiJ_G0000699.1 mouse_genomes_project 1 192102881 192103375 - TEC TEC MGP_WSBEiJ_T0002698.1 MGP_WSBEiJ_G0002574.1 mouse_genomes_project 1 14964174 15029365 - Gm16070 antisense antisense MGP_WSBEiJ_T0002699.1 MGP_WSBEiJ_G0002574.1 mouse_genomes_project 1 14982631 15029727 - Gm16070 antisense antisense MGP_WSBEiJ_T0002700.1 MGP_WSBEiJ_G0002574.1 mouse_genomes_project 1 15027064 15029336 - Gm16070 antisense antisense MGP_WSBEiJ_T0011999.1 MGP_WSBEiJ_G0010129.1 mouse_genomes_project 1 130326454 130327042 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022986.1 MGP_WSBEiJ_G0016228.1 mouse_genomes_project 1 178024006 178024879 + MGP_WSBEiJ_P0022986 protein_coding protein_coding MGP_WSBEiJ_T0002810.1 MGP_WSBEiJ_G0002659.1 mouse_genomes_project 1 132421287 132517227 + antisense antisense MGP_WSBEiJ_T0000608.1 MGP_WSBEiJ_G0000552.1 mouse_genomes_project 1 137020523 137022613 - TEC TEC MGP_WSBEiJ_T0000576.1 MGP_WSBEiJ_G0000521.1 mouse_genomes_project 1 127642515 127645213 - TEC TEC MGP_WSBEiJ_T0011896.1 MGP_WSBEiJ_G0010026.1 mouse_genomes_project 1 83461213 83462001 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002842.1 MGP_WSBEiJ_G0002684.1 mouse_genomes_project 1 154240730 154245174 - Gm10138 antisense antisense MGP_WSBEiJ_T0002843.1 MGP_WSBEiJ_G0002684.1 mouse_genomes_project 1 154243832 154246323 - Gm10138 antisense antisense MGP_WSBEiJ_T0002844.1 MGP_WSBEiJ_G0002684.1 mouse_genomes_project 1 154245460 154245828 - Gm10138 antisense pseudogene MGP_WSBEiJ_T0012079.1 MGP_WSBEiJ_G0010209.1 mouse_genomes_project 1 168980679 168982243 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002895.1 MGP_WSBEiJ_G0002726.1 mouse_genomes_project 1 183015434 183034325 - Gm16564 antisense antisense MGP_WSBEiJ_T0019862.1 MGP_WSBEiJ_G0015567.1 mouse_genomes_project 1 74285306 74362632 - MGP_WSBEiJ_P0019862 Usp37 protein_coding protein_coding MGP_WSBEiJ_T0019863.1 MGP_WSBEiJ_G0015567.1 mouse_genomes_project 1 74287527 74406124 - MGP_WSBEiJ_P0019863 Usp37 protein_coding protein_coding MGP_WSBEiJ_T0019864.1 MGP_WSBEiJ_G0015567.1 mouse_genomes_project 1 74288912 74321926 - Usp37 protein_coding processed_transcript MGP_WSBEiJ_T0019865.1 MGP_WSBEiJ_G0015567.1 mouse_genomes_project 1 74300910 74362614 - Usp37 protein_coding retained_intron MGP_WSBEiJ_T0019866.1 MGP_WSBEiJ_G0015567.1 mouse_genomes_project 1 74351948 74362635 - MGP_WSBEiJ_P0019866 Usp37 protein_coding protein_coding MGP_WSBEiJ_T0019867.1 MGP_WSBEiJ_G0015567.1 mouse_genomes_project 1 74356102 74362620 - Usp37 protein_coding retained_intron MGP_WSBEiJ_T0019868.1 MGP_WSBEiJ_G0015567.1 mouse_genomes_project 1 74356186 74363112 - Usp37 protein_coding processed_transcript MGP_WSBEiJ_T0097576.1 MGP_WSBEiJ_G0036239.1 mouse_genomes_project 1 139039379 139039477 + Gm24086 snRNA snRNA MGP_WSBEiJ_T0097573.1 MGP_WSBEiJ_G0036236.1 mouse_genomes_project 1 134123593 134123709 + Gm26034 snRNA snRNA MGP_WSBEiJ_T0022958.1 MGP_WSBEiJ_G0016214.1 mouse_genomes_project 1 177129217 177165558 - MGP_WSBEiJ_P0022958 Cadm3 protein_coding protein_coding MGP_WSBEiJ_T0022959.1 MGP_WSBEiJ_G0016214.1 mouse_genomes_project 1 177131945 177165548 - MGP_WSBEiJ_P0022959 Cadm3 protein_coding protein_coding MGP_WSBEiJ_T0022960.1 MGP_WSBEiJ_G0016214.1 mouse_genomes_project 1 177132797 177137847 - Cadm3 protein_coding retained_intron MGP_WSBEiJ_T0022961.1 MGP_WSBEiJ_G0016214.1 mouse_genomes_project 1 177139193 177165511 - Cadm3 protein_coding retained_intron MGP_WSBEiJ_T0022962.1 MGP_WSBEiJ_G0016214.1 mouse_genomes_project 1 177141591 177165496 - Cadm3 protein_coding retained_intron MGP_WSBEiJ_T0000765.1 MGP_WSBEiJ_G0000706.1 mouse_genomes_project 1 196257755 196258379 + TEC TEC MGP_WSBEiJ_T0000358.1 MGP_WSBEiJ_G0000306.1 mouse_genomes_project 1 11032663 11034912 - TEC TEC MGP_WSBEiJ_T0021574.1 MGP_WSBEiJ_G0015924.1 mouse_genomes_project 1 136855523 136959037 + MGP_WSBEiJ_P0021574 Syt2 protein_coding protein_coding MGP_WSBEiJ_T0021575.1 MGP_WSBEiJ_G0015924.1 mouse_genomes_project 1 136855527 136966583 + MGP_WSBEiJ_P0021575 Syt2 protein_coding protein_coding MGP_WSBEiJ_T0021576.1 MGP_WSBEiJ_G0015924.1 mouse_genomes_project 1 136921326 136970313 + MGP_WSBEiJ_P0021576 Syt2 protein_coding protein_coding MGP_WSBEiJ_T0021577.1 MGP_WSBEiJ_G0015924.1 mouse_genomes_project 1 136965749 136979770 + Syt2 protein_coding processed_transcript MGP_WSBEiJ_T0011961.1 MGP_WSBEiJ_G0010091.1 mouse_genomes_project 1 113744503 113745172 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018791.1 MGP_WSBEiJ_G0015357.1 mouse_genomes_project 1 36033442 36049064 - MGP_WSBEiJ_P0018791 Mitd1 protein_coding protein_coding MGP_WSBEiJ_T0018792.1 MGP_WSBEiJ_G0015357.1 mouse_genomes_project 1 36037529 36049068 - MGP_WSBEiJ_P0018792 Mitd1 protein_coding protein_coding MGP_WSBEiJ_T0018793.1 MGP_WSBEiJ_G0015357.1 mouse_genomes_project 1 36037531 36038760 - Mitd1 protein_coding processed_transcript MGP_WSBEiJ_T0018794.1 MGP_WSBEiJ_G0015357.1 mouse_genomes_project 1 36037629 36040528 - Mitd1 protein_coding processed_transcript MGP_WSBEiJ_T0018795.1 MGP_WSBEiJ_G0015357.1 mouse_genomes_project 1 36040588 36048933 - Mitd1 protein_coding retained_intron MGP_WSBEiJ_T0005886.1 MGP_WSBEiJ_G0004931.1 mouse_genomes_project 1 168418278 168420167 + 1700029M03Rik lincRNA lincRNA MGP_WSBEiJ_T0005887.1 MGP_WSBEiJ_G0004931.1 mouse_genomes_project 1 168418280 168418760 + 1700029M03Rik lincRNA lincRNA MGP_WSBEiJ_T0012133.1 MGP_WSBEiJ_G0010263.1 mouse_genomes_project 1 196478467 196478803 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020915.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106650551 106785221 - MGP_WSBEiJ_P0020915 Pign protein_coding protein_coding MGP_WSBEiJ_T0020916.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106650555 106789943 - MGP_WSBEiJ_P0020916 Pign protein_coding protein_coding MGP_WSBEiJ_T0020917.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106653288 106700056 - Pign protein_coding processed_transcript MGP_WSBEiJ_T0020918.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106681866 106789924 - MGP_WSBEiJ_P0020918 Pign protein_coding protein_coding MGP_WSBEiJ_T0020919.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106690261 106789943 - MGP_WSBEiJ_P0020919 Pign protein_coding protein_coding MGP_WSBEiJ_T0020920.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106771368 106789958 - Pign protein_coding retained_intron MGP_WSBEiJ_T0020921.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106771368 106789957 - Pign protein_coding retained_intron MGP_WSBEiJ_T0020922.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106771523 106775856 - Pign protein_coding retained_intron MGP_WSBEiJ_T0020923.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106784471 106789954 - Pign protein_coding retained_intron MGP_WSBEiJ_T0020924.1 MGP_WSBEiJ_G0015778.1 mouse_genomes_project 1 106785400 106789953 - Pign protein_coding retained_intron MGP_WSBEiJ_T0012037.1 MGP_WSBEiJ_G0010167.1 mouse_genomes_project 1 151742829 151743301 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000609.1 MGP_WSBEiJ_G0000553.1 mouse_genomes_project 1 137040676 137048286 - TEC TEC MGP_WSBEiJ_T0023530.1 MGP_WSBEiJ_G0016348.1 mouse_genomes_project 1 195950424 195962991 - MGP_WSBEiJ_P0023530 Nenf protein_coding protein_coding MGP_WSBEiJ_T0011862.1 MGP_WSBEiJ_G0009992.1 mouse_genomes_project 1 65472800 65473212 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011683.1 MGP_WSBEiJ_G0009813.1 mouse_genomes_project 1 9260200 9261073 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005945.1 MGP_WSBEiJ_G0004975.1 mouse_genomes_project 1 189414465 189418901 - Gm34732 lincRNA lincRNA MGP_WSBEiJ_T0020690.1 MGP_WSBEiJ_G0015724.1 mouse_genomes_project 1 93157414 93192177 - MGP_WSBEiJ_P0020690 Ndufa10 protein_coding protein_coding MGP_WSBEiJ_T0020691.1 MGP_WSBEiJ_G0015724.1 mouse_genomes_project 1 93157683 93192074 - MGP_WSBEiJ_P0020691 Ndufa10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020692.1 MGP_WSBEiJ_G0015724.1 mouse_genomes_project 1 93158270 93179136 - Ndufa10 protein_coding retained_intron MGP_WSBEiJ_T0020693.1 MGP_WSBEiJ_G0015724.1 mouse_genomes_project 1 93170472 93181405 - Ndufa10 protein_coding processed_transcript MGP_WSBEiJ_T0020694.1 MGP_WSBEiJ_G0015724.1 mouse_genomes_project 1 93180637 93189262 - Ndufa10 protein_coding retained_intron MGP_WSBEiJ_T0020695.1 MGP_WSBEiJ_G0015724.1 mouse_genomes_project 1 93181518 93189451 - Ndufa10 protein_coding retained_intron MGP_WSBEiJ_T0020696.1 MGP_WSBEiJ_G0015724.1 mouse_genomes_project 1 93185841 93192064 - MGP_WSBEiJ_P0020696 Ndufa10 protein_coding protein_coding MGP_WSBEiJ_T0020697.1 MGP_WSBEiJ_G0015724.1 mouse_genomes_project 1 93191095 93192084 - Ndufa10 protein_coding retained_intron MGP_WSBEiJ_T0011890.1 MGP_WSBEiJ_G0010020.1 mouse_genomes_project 1 81866445 81867151 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098766.1 MGP_WSBEiJ_G0037429.1 mouse_genomes_project 1 66701155 66701284 + Gm26342 snoRNA snoRNA MGP_WSBEiJ_T0021602.1 MGP_WSBEiJ_G0015931.1 mouse_genomes_project 1 137530060 137535058 - MGP_WSBEiJ_P0021602 Elf3 protein_coding protein_coding MGP_WSBEiJ_T0021603.1 MGP_WSBEiJ_G0015931.1 mouse_genomes_project 1 137530064 137534928 - MGP_WSBEiJ_P0021603 Elf3 protein_coding protein_coding MGP_WSBEiJ_T0021604.1 MGP_WSBEiJ_G0015931.1 mouse_genomes_project 1 137533154 137534147 - Elf3 protein_coding retained_intron MGP_WSBEiJ_T0022504.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169078678 169121091 - MGP_WSBEiJ_P0022504 Mpzl1 protein_coding protein_coding MGP_WSBEiJ_T0022505.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169079813 169091798 - MGP_WSBEiJ_P0022505 Mpzl1 protein_coding protein_coding MGP_WSBEiJ_T0022506.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169079852 169121211 - MGP_WSBEiJ_P0022506 Mpzl1 protein_coding protein_coding MGP_WSBEiJ_T0022507.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169080093 169121236 - MGP_WSBEiJ_P0022507 Mpzl1 protein_coding protein_coding MGP_WSBEiJ_T0022508.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169087796 169096623 - Mpzl1 protein_coding processed_transcript MGP_WSBEiJ_T0022509.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169090231 169091754 - Mpzl1 protein_coding retained_intron MGP_WSBEiJ_T0022510.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169091644 169099959 - Mpzl1 protein_coding processed_transcript MGP_WSBEiJ_T0022511.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169091712 169121140 - MGP_WSBEiJ_P0022511 Mpzl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022512.1 MGP_WSBEiJ_G0016103.1 mouse_genomes_project 1 169094438 169120833 - Mpzl1 protein_coding processed_transcript MGP_WSBEiJ_T0011647.1 MGP_WSBEiJ_G0009777.1 mouse_genomes_project 1 1647587 1648523 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011855.1 MGP_WSBEiJ_G0009985.1 mouse_genomes_project 1 64375251 64375904 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002929.1 MGP_WSBEiJ_G0002751.1 mouse_genomes_project 1 196682825 196686821 - Gm26670 antisense antisense MGP_WSBEiJ_T0016394.1 MGP_WSBEiJ_G0014513.1 mouse_genomes_project 1 41178656 41185009 - Pantr2 processed_transcript lincRNA MGP_WSBEiJ_T0016395.1 MGP_WSBEiJ_G0014513.1 mouse_genomes_project 1 41178667 41179648 - Pantr2 processed_transcript TEC MGP_WSBEiJ_T0000751.1 MGP_WSBEiJ_G0000692.1 mouse_genomes_project 1 190479794 190479987 - TEC TEC MGP_WSBEiJ_T0022090.1 MGP_WSBEiJ_G0016025.1 mouse_genomes_project 1 158961826 159098800 - MGP_WSBEiJ_P0022090 Cep350 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022091.1 MGP_WSBEiJ_G0016025.1 mouse_genomes_project 1 158961832 159098869 - MGP_WSBEiJ_P0022091 Cep350 protein_coding protein_coding MGP_WSBEiJ_T0022092.1 MGP_WSBEiJ_G0016025.1 mouse_genomes_project 1 158965409 158978247 - Cep350 protein_coding processed_transcript MGP_WSBEiJ_T0022093.1 MGP_WSBEiJ_G0016025.1 mouse_genomes_project 1 158980201 159004810 - Cep350 protein_coding processed_transcript MGP_WSBEiJ_T0022094.1 MGP_WSBEiJ_G0016025.1 mouse_genomes_project 1 158985567 159003599 - Cep350 protein_coding processed_transcript MGP_WSBEiJ_T0022095.1 MGP_WSBEiJ_G0016025.1 mouse_genomes_project 1 159060011 159098504 - MGP_WSBEiJ_P0022095 Cep350 protein_coding protein_coding MGP_WSBEiJ_T0022096.1 MGP_WSBEiJ_G0016025.1 mouse_genomes_project 1 159095592 159098798 - Cep350 protein_coding retained_intron MGP_WSBEiJ_T0023338.1 MGP_WSBEiJ_G0016308.1 mouse_genomes_project 1 187605975 187607907 + Aida protein_coding retained_intron MGP_WSBEiJ_T0023339.1 MGP_WSBEiJ_G0016308.1 mouse_genomes_project 1 187606434 187634879 + MGP_WSBEiJ_P0023339 Aida protein_coding protein_coding MGP_WSBEiJ_T0023340.1 MGP_WSBEiJ_G0016308.1 mouse_genomes_project 1 187606955 187627454 + MGP_WSBEiJ_P0023340 Aida protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023341.1 MGP_WSBEiJ_G0016308.1 mouse_genomes_project 1 187613252 187631531 + Aida protein_coding retained_intron MGP_WSBEiJ_T0023342.1 MGP_WSBEiJ_G0016308.1 mouse_genomes_project 1 187615051 187627748 + Aida protein_coding retained_intron MGP_WSBEiJ_T0023343.1 MGP_WSBEiJ_G0016308.1 mouse_genomes_project 1 187631331 187632103 + Aida protein_coding retained_intron MGP_WSBEiJ_T0011798.1 MGP_WSBEiJ_G0009928.1 mouse_genomes_project 1 48891698 48892432 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011863.1 MGP_WSBEiJ_G0009993.1 mouse_genomes_project 1 66200358 66202892 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019651.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65590441 65797570 + MGP_WSBEiJ_P0019651 protein_coding protein_coding MGP_WSBEiJ_T0019652.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65590481 65860778 + MGP_WSBEiJ_P0019652 protein_coding protein_coding MGP_WSBEiJ_T0019653.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65590484 65861339 + MGP_WSBEiJ_P0019653 protein_coding protein_coding MGP_WSBEiJ_T0019654.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65590633 65738308 + protein_coding processed_transcript MGP_WSBEiJ_T0019655.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65590712 65611010 + protein_coding processed_transcript MGP_WSBEiJ_T0019656.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65671757 65861337 + MGP_WSBEiJ_P0019656 protein_coding protein_coding MGP_WSBEiJ_T0019657.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65671772 65861337 + MGP_WSBEiJ_P0019657 protein_coding protein_coding MGP_WSBEiJ_T0019658.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65737587 65857936 + MGP_WSBEiJ_P0019658 protein_coding protein_coding MGP_WSBEiJ_T0019659.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65737704 65822607 + protein_coding retained_intron MGP_WSBEiJ_T0019660.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65737866 65798244 + protein_coding retained_intron MGP_WSBEiJ_T0019661.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65737970 65819963 + MGP_WSBEiJ_P0019661 protein_coding protein_coding MGP_WSBEiJ_T0019662.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65781617 65861339 + MGP_WSBEiJ_P0019662 protein_coding protein_coding MGP_WSBEiJ_T0019663.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65781620 65861339 + MGP_WSBEiJ_P0019663 protein_coding protein_coding MGP_WSBEiJ_T0019664.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65797464 65832038 + MGP_WSBEiJ_P0019664 protein_coding protein_coding MGP_WSBEiJ_T0019665.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65797654 65831567 + MGP_WSBEiJ_P0019665 protein_coding protein_coding MGP_WSBEiJ_T0019666.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65803893 65858706 + protein_coding processed_transcript MGP_WSBEiJ_T0019667.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65803926 65832888 + MGP_WSBEiJ_P0019667 protein_coding protein_coding MGP_WSBEiJ_T0019668.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65803933 65826895 + protein_coding processed_transcript MGP_WSBEiJ_T0019669.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65803959 65820052 + protein_coding retained_intron MGP_WSBEiJ_T0019670.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65833897 65844338 + protein_coding processed_transcript MGP_WSBEiJ_T0019671.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65834747 65857055 + MGP_WSBEiJ_P0019671 protein_coding protein_coding MGP_WSBEiJ_T0019672.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65834747 65857055 + MGP_WSBEiJ_P0019672 protein_coding protein_coding MGP_WSBEiJ_T0019673.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65835439 65857032 + MGP_WSBEiJ_P0019673 protein_coding protein_coding MGP_WSBEiJ_T0019674.1 MGP_WSBEiJ_G0015527.1 mouse_genomes_project 1 65852415 65858201 + MGP_WSBEiJ_P0019674 protein_coding protein_coding MGP_WSBEiJ_T0018599.1 MGP_WSBEiJ_G0015323.1 mouse_genomes_project 1 32422796 32424091 + Ptpn18 protein_coding retained_intron MGP_WSBEiJ_T0018600.1 MGP_WSBEiJ_G0015323.1 mouse_genomes_project 1 32422799 32436717 + MGP_WSBEiJ_P0018600 Ptpn18 protein_coding protein_coding MGP_WSBEiJ_T0018601.1 MGP_WSBEiJ_G0015323.1 mouse_genomes_project 1 32422811 32434866 + MGP_WSBEiJ_P0018601 Ptpn18 protein_coding protein_coding MGP_WSBEiJ_T0018602.1 MGP_WSBEiJ_G0015323.1 mouse_genomes_project 1 32422826 32434865 + Ptpn18 protein_coding retained_intron MGP_WSBEiJ_T0018603.1 MGP_WSBEiJ_G0015323.1 mouse_genomes_project 1 32426304 32429861 + Ptpn18 protein_coding retained_intron MGP_WSBEiJ_T0018604.1 MGP_WSBEiJ_G0015323.1 mouse_genomes_project 1 32435652 32438666 + MGP_WSBEiJ_P0018604 Ptpn18 protein_coding protein_coding MGP_WSBEiJ_T0018605.1 MGP_WSBEiJ_G0015323.1 mouse_genomes_project 1 32437431 32438666 + Ptpn18 protein_coding processed_transcript MGP_WSBEiJ_T0022652.1 MGP_WSBEiJ_G0016139.1 mouse_genomes_project 1 174269395 174307586 + MGP_WSBEiJ_P0022652 Olfml2b protein_coding protein_coding MGP_WSBEiJ_T0019089.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50889962 50934407 + MGP_WSBEiJ_P0019089 Stat1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0019090.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50895367 50930493 + MGP_WSBEiJ_P0019090 Stat1 protein_coding protein_coding MGP_WSBEiJ_T0019091.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50895417 50930493 + MGP_WSBEiJ_P0019091 Stat1 protein_coding protein_coding MGP_WSBEiJ_T0019092.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50895425 50907677 + MGP_WSBEiJ_P0019092 Stat1 protein_coding protein_coding MGP_WSBEiJ_T0019093.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50895476 50930410 + MGP_WSBEiJ_P0019093 Stat1 protein_coding protein_coding MGP_WSBEiJ_T0019094.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50895486 50896322 + Stat1 protein_coding retained_intron MGP_WSBEiJ_T0019095.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50895499 50912916 + Stat1 protein_coding retained_intron MGP_WSBEiJ_T0019096.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50895551 50935841 + MGP_WSBEiJ_P0019096 Stat1 protein_coding protein_coding MGP_WSBEiJ_T0019097.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50925165 50927461 + Stat1 protein_coding retained_intron MGP_WSBEiJ_T0019098.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50925319 50936974 + MGP_WSBEiJ_P0019098 Stat1 protein_coding protein_coding MGP_WSBEiJ_T0019099.1 MGP_WSBEiJ_G0015421.1 mouse_genomes_project 1 50927314 50934670 + MGP_WSBEiJ_P0019099 Stat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011841.1 MGP_WSBEiJ_G0009971.1 mouse_genomes_project 1 60332438 60335065 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005605.1 MGP_WSBEiJ_G0004715.1 mouse_genomes_project 1 36305847 36334243 + Gm5099 lincRNA lincRNA MGP_WSBEiJ_T0099964.1 MGP_WSBEiJ_G0038627.1 mouse_genomes_project 1 32380806 32381637 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099965.1 MGP_WSBEiJ_G0038627.1 mouse_genomes_project 1 32381521 32383328 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0021189.1 MGP_WSBEiJ_G0015836.1 mouse_genomes_project 1 129667276 129732868 + MGP_WSBEiJ_P0021189 Rab3gap1 protein_coding protein_coding MGP_WSBEiJ_T0021190.1 MGP_WSBEiJ_G0015836.1 mouse_genomes_project 1 129667305 129692313 + Rab3gap1 protein_coding retained_intron MGP_WSBEiJ_T0021191.1 MGP_WSBEiJ_G0015836.1 mouse_genomes_project 1 129667315 129732876 + MGP_WSBEiJ_P0021191 Rab3gap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021192.1 MGP_WSBEiJ_G0015836.1 mouse_genomes_project 1 129689205 129694218 + Rab3gap1 protein_coding retained_intron MGP_WSBEiJ_T0021193.1 MGP_WSBEiJ_G0015836.1 mouse_genomes_project 1 129712377 129715579 + Rab3gap1 protein_coding retained_intron MGP_WSBEiJ_T0021194.1 MGP_WSBEiJ_G0015836.1 mouse_genomes_project 1 129727216 129731911 + Rab3gap1 protein_coding processed_transcript MGP_WSBEiJ_T0002713.1 MGP_WSBEiJ_G0002586.1 mouse_genomes_project 1 35454725 35460403 - 4930439A04Rik antisense antisense MGP_WSBEiJ_T0002714.1 MGP_WSBEiJ_G0002586.1 mouse_genomes_project 1 35459785 35460419 - 4930439A04Rik antisense antisense MGP_WSBEiJ_T0100416.1 MGP_WSBEiJ_G0038875.1 mouse_genomes_project 1 108508022 108520579 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000396.1 MGP_WSBEiJ_G0000342.1 mouse_genomes_project 1 23367514 23368736 + TEC TEC MGP_WSBEiJ_T0021916.1 MGP_WSBEiJ_G0015990.1 mouse_genomes_project 1 154330082 154345920 + Trmt1l protein_coding retained_intron MGP_WSBEiJ_T0021917.1 MGP_WSBEiJ_G0015990.1 mouse_genomes_project 1 154330082 154361427 + MGP_WSBEiJ_P0021917 Trmt1l protein_coding protein_coding MGP_WSBEiJ_T0021918.1 MGP_WSBEiJ_G0015990.1 mouse_genomes_project 1 154330177 154338924 + Trmt1l protein_coding retained_intron MGP_WSBEiJ_T0021919.1 MGP_WSBEiJ_G0015990.1 mouse_genomes_project 1 154330182 154354013 + Trmt1l protein_coding retained_intron MGP_WSBEiJ_T0021920.1 MGP_WSBEiJ_G0015990.1 mouse_genomes_project 1 154330188 154332176 + Trmt1l protein_coding retained_intron MGP_WSBEiJ_T0021921.1 MGP_WSBEiJ_G0015990.1 mouse_genomes_project 1 154330207 154338924 + Trmt1l protein_coding retained_intron MGP_WSBEiJ_T0021922.1 MGP_WSBEiJ_G0015990.1 mouse_genomes_project 1 154330246 154361427 + MGP_WSBEiJ_P0021922 Trmt1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002717.1 MGP_WSBEiJ_G0002589.1 mouse_genomes_project 1 36094973 36123358 + Gm15457 antisense antisense MGP_WSBEiJ_T0000635.1 MGP_WSBEiJ_G0000578.1 mouse_genomes_project 1 143921446 143924569 - TEC TEC MGP_WSBEiJ_T0000593.1 MGP_WSBEiJ_G0000538.1 mouse_genomes_project 1 132427783 132430043 + TEC TEC MGP_WSBEiJ_T0097516.1 MGP_WSBEiJ_G0036179.1 mouse_genomes_project 1 1579139 1579246 + Gm22307 snRNA snRNA MGP_WSBEiJ_T0005947.1 MGP_WSBEiJ_G0004977.1 mouse_genomes_project 1 189424925 189432435 + Gm37662 lincRNA lincRNA MGP_WSBEiJ_T0012134.1 MGP_WSBEiJ_G0010264.1 mouse_genomes_project 1 196689559 196689791 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000571.1 MGP_WSBEiJ_G0000516.1 mouse_genomes_project 1 125065612 125067106 - TEC TEC MGP_WSBEiJ_T0000321.1 MGP_WSBEiJ_G0000269.1 mouse_genomes_project 1 96522 97592 + TEC TEC MGP_WSBEiJ_T0097234.1 MGP_WSBEiJ_G0035915.1 mouse_genomes_project 1 49898532 49900796 + Gm28320 sense_intronic sense_intronic MGP_WSBEiJ_T0022663.1 MGP_WSBEiJ_G0016143.1 mouse_genomes_project 1 174550144 174555838 - MGP_WSBEiJ_P0022663 Fcrlb protein_coding protein_coding MGP_WSBEiJ_T0098751.1 MGP_WSBEiJ_G0037414.1 mouse_genomes_project 1 50709567 50709689 - Gm27607 snoRNA snoRNA MGP_WSBEiJ_T0002711.1 MGP_WSBEiJ_G0002584.1 mouse_genomes_project 1 34591962 34592653 - Gm38033 antisense antisense MGP_WSBEiJ_T0002715.1 MGP_WSBEiJ_G0002587.1 mouse_genomes_project 1 35763199 35764313 + 4930556I23Rik antisense antisense MGP_WSBEiJ_T0023558.1 MGP_WSBEiJ_G0016354.1 mouse_genomes_project 1 196518974 196532861 + MGP_WSBEiJ_P0023558 Nek2 protein_coding protein_coding MGP_WSBEiJ_T0023559.1 MGP_WSBEiJ_G0016354.1 mouse_genomes_project 1 196519040 196525874 + Nek2 protein_coding retained_intron MGP_WSBEiJ_T0023560.1 MGP_WSBEiJ_G0016354.1 mouse_genomes_project 1 196519712 196523405 + Nek2 protein_coding retained_intron MGP_WSBEiJ_T0023561.1 MGP_WSBEiJ_G0016354.1 mouse_genomes_project 1 196524727 196527570 + Nek2 protein_coding processed_transcript MGP_WSBEiJ_T0005598.1 MGP_WSBEiJ_G0004709.1 mouse_genomes_project 1 34017166 34021623 - Gm37146 lincRNA lincRNA MGP_WSBEiJ_T0020698.1 MGP_WSBEiJ_G0015725.1 mouse_genomes_project 1 93199817 93240499 - MGP_WSBEiJ_P0020698 Olfr1416 protein_coding protein_coding MGP_WSBEiJ_T0020963.1 MGP_WSBEiJ_G0015787.1 mouse_genomes_project 1 108088378 108112276 + MGP_WSBEiJ_P0020963 Serpinb12 protein_coding protein_coding MGP_WSBEiJ_T0020964.1 MGP_WSBEiJ_G0015787.1 mouse_genomes_project 1 108092879 108112276 + MGP_WSBEiJ_P0020964 Serpinb12 protein_coding protein_coding MGP_WSBEiJ_T0020965.1 MGP_WSBEiJ_G0015787.1 mouse_genomes_project 1 108092881 108105605 + Serpinb12 protein_coding retained_intron MGP_WSBEiJ_T0002817.1 MGP_WSBEiJ_G0002664.1 mouse_genomes_project 1 134163053 134166350 + Gm29629 antisense antisense MGP_WSBEiJ_T0011684.1 MGP_WSBEiJ_G0009814.1 mouse_genomes_project 1 9809091 9809778 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011655.1 MGP_WSBEiJ_G0009785.1 mouse_genomes_project 1 3070367 3071450 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019647.1 MGP_WSBEiJ_G0015525.1 mouse_genomes_project 1 64648936 64716805 + MGP_WSBEiJ_P0019647 Pth2r protein_coding protein_coding MGP_WSBEiJ_T0019648.1 MGP_WSBEiJ_G0015525.1 mouse_genomes_project 1 64680466 64762061 + MGP_WSBEiJ_P0019648 Pth2r protein_coding protein_coding MGP_WSBEiJ_T0005686.1 MGP_WSBEiJ_G0004772.1 mouse_genomes_project 1 69084566 69088079 - Gm29113 lincRNA lincRNA MGP_WSBEiJ_T0023360.1 MGP_WSBEiJ_G0016313.1 mouse_genomes_project 1 188322454 188323726 - 1700056E22Rik protein_coding antisense MGP_WSBEiJ_T0023361.1 MGP_WSBEiJ_G0016313.1 mouse_genomes_project 1 188322456 188323423 - MGP_WSBEiJ_P0023361 1700056E22Rik protein_coding protein_coding MGP_WSBEiJ_T0012012.1 MGP_WSBEiJ_G0010142.1 mouse_genomes_project 1 139158417 139159066 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020186.1 MGP_WSBEiJ_G0015618.1 mouse_genomes_project 1 79414162 79419614 - MGP_WSBEiJ_P0020186 Scg2 protein_coding protein_coding MGP_WSBEiJ_T0020187.1 MGP_WSBEiJ_G0015618.1 mouse_genomes_project 1 79414162 79419536 - MGP_WSBEiJ_P0020187 Scg2 protein_coding protein_coding MGP_WSBEiJ_T0023209.1 MGP_WSBEiJ_G0016279.1 mouse_genomes_project 1 184922901 184950790 + MGP_WSBEiJ_P0023209 Acbd3 protein_coding protein_coding MGP_WSBEiJ_T0023210.1 MGP_WSBEiJ_G0016279.1 mouse_genomes_project 1 184926709 184931352 + Acbd3 protein_coding retained_intron MGP_WSBEiJ_T0000674.1 MGP_WSBEiJ_G0000617.1 mouse_genomes_project 1 162516006 162518855 + TEC TEC MGP_WSBEiJ_T0000388.1 MGP_WSBEiJ_G0000334.1 mouse_genomes_project 1 23251953 23254501 - TEC TEC MGP_WSBEiJ_T0020884.1 MGP_WSBEiJ_G0015772.1 mouse_genomes_project 1 98681473 98707394 + MGP_WSBEiJ_P0020884 Gin1 protein_coding protein_coding MGP_WSBEiJ_T0020885.1 MGP_WSBEiJ_G0015772.1 mouse_genomes_project 1 98681498 98708134 + MGP_WSBEiJ_P0020885 Gin1 protein_coding protein_coding MGP_WSBEiJ_T0020886.1 MGP_WSBEiJ_G0015772.1 mouse_genomes_project 1 98681502 98682307 + Gin1 protein_coding processed_transcript MGP_WSBEiJ_T0020887.1 MGP_WSBEiJ_G0015772.1 mouse_genomes_project 1 98681511 98707431 + MGP_WSBEiJ_P0020887 Gin1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020888.1 MGP_WSBEiJ_G0015772.1 mouse_genomes_project 1 98686394 98688720 + Gin1 protein_coding retained_intron MGP_WSBEiJ_T0020889.1 MGP_WSBEiJ_G0015772.1 mouse_genomes_project 1 98690077 98699051 + MGP_WSBEiJ_P0020889 Gin1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020374.1 MGP_WSBEiJ_G0015657.1 mouse_genomes_project 1 86310470 86323418 - MGP_WSBEiJ_P0020374 Htr2b protein_coding protein_coding MGP_WSBEiJ_T0020375.1 MGP_WSBEiJ_G0015657.1 mouse_genomes_project 1 86311545 86322120 - MGP_WSBEiJ_P0020375 Htr2b protein_coding protein_coding MGP_WSBEiJ_T0002921.1 MGP_WSBEiJ_G0002748.1 mouse_genomes_project 1 195705822 195706678 - Gm38188 antisense antisense MGP_WSBEiJ_T0011802.1 MGP_WSBEiJ_G0009932.1 mouse_genomes_project 1 49254858 49255020 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012098.1 MGP_WSBEiJ_G0010228.1 mouse_genomes_project 1 175234546 175234716 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019016.1 MGP_WSBEiJ_G0015405.1 mouse_genomes_project 1 43044599 43287307 + MGP_WSBEiJ_P0019016 Gulp1 protein_coding protein_coding MGP_WSBEiJ_T0019017.1 MGP_WSBEiJ_G0015405.1 mouse_genomes_project 1 43044781 43279498 + MGP_WSBEiJ_P0019017 Gulp1 protein_coding protein_coding MGP_WSBEiJ_T0019018.1 MGP_WSBEiJ_G0015405.1 mouse_genomes_project 1 43044781 43287295 + MGP_WSBEiJ_P0019018 Gulp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019019.1 MGP_WSBEiJ_G0015405.1 mouse_genomes_project 1 43044815 43268643 + Gulp1 protein_coding processed_transcript MGP_WSBEiJ_T0019020.1 MGP_WSBEiJ_G0015405.1 mouse_genomes_project 1 43045681 43189185 + MGP_WSBEiJ_P0019020 Gulp1 protein_coding protein_coding MGP_WSBEiJ_T0019021.1 MGP_WSBEiJ_G0015405.1 mouse_genomes_project 1 43176504 43287294 + MGP_WSBEiJ_P0019021 Gulp1 protein_coding protein_coding MGP_WSBEiJ_T0005770.1 MGP_WSBEiJ_G0004839.1 mouse_genomes_project 1 102911856 102913990 - Gm28187 lincRNA lincRNA MGP_WSBEiJ_T0000398.1 MGP_WSBEiJ_G0000344.1 mouse_genomes_project 1 28583748 28586631 - TEC TEC MGP_WSBEiJ_T0000368.1 MGP_WSBEiJ_G0000316.1 mouse_genomes_project 1 17418674 17421750 - TEC TEC MGP_WSBEiJ_T0011729.1 MGP_WSBEiJ_G0009859.1 mouse_genomes_project 1 28544269 28544597 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098808.1 MGP_WSBEiJ_G0037471.1 mouse_genomes_project 1 164397388 164397449 + Gm23212 snoRNA snoRNA MGP_WSBEiJ_T0002784.1 MGP_WSBEiJ_G0002640.1 mouse_genomes_project 1 91980198 91996182 - Gm17090 antisense antisense MGP_WSBEiJ_T0100402.1 MGP_WSBEiJ_G0038861.1 mouse_genomes_project 1 88547224 88548068 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011756.1 MGP_WSBEiJ_G0009886.1 mouse_genomes_project 1 35621752 35623542 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005599.1 MGP_WSBEiJ_G0004710.1 mouse_genomes_project 1 34039027 34047089 - Gm33222 lincRNA lincRNA MGP_WSBEiJ_T0005600.1 MGP_WSBEiJ_G0004710.1 mouse_genomes_project 1 34039110 34047035 - Gm33222 lincRNA lincRNA MGP_WSBEiJ_T0000708.1 MGP_WSBEiJ_G0000651.1 mouse_genomes_project 1 175011413 175012679 + TEC TEC MGP_WSBEiJ_T0021266.1 MGP_WSBEiJ_G0015852.1 mouse_genomes_project 1 132776514 132790320 + MGP_WSBEiJ_P0021266 Fcamr protein_coding protein_coding MGP_WSBEiJ_T0021267.1 MGP_WSBEiJ_G0015852.1 mouse_genomes_project 1 132776514 132790288 + MGP_WSBEiJ_P0021267 Fcamr protein_coding protein_coding MGP_WSBEiJ_T0098785.1 MGP_WSBEiJ_G0037448.1 mouse_genomes_project 1 115080615 115080749 - Gm24937 snoRNA snoRNA MGP_WSBEiJ_T0019240.1 MGP_WSBEiJ_G0015448.1 mouse_genomes_project 1 54056608 54118142 - MGP_WSBEiJ_P0019240 Rftn2 protein_coding protein_coding MGP_WSBEiJ_T0019241.1 MGP_WSBEiJ_G0015448.1 mouse_genomes_project 1 54058197 54118142 - MGP_WSBEiJ_P0019241 Rftn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019242.1 MGP_WSBEiJ_G0015448.1 mouse_genomes_project 1 54093032 54118142 - MGP_WSBEiJ_P0019242 Rftn2 protein_coding protein_coding MGP_WSBEiJ_T0019243.1 MGP_WSBEiJ_G0015448.1 mouse_genomes_project 1 54095328 54097840 - Rftn2 protein_coding processed_transcript MGP_WSBEiJ_T0019244.1 MGP_WSBEiJ_G0015448.1 mouse_genomes_project 1 54115302 54118142 - Rftn2 protein_coding processed_transcript MGP_WSBEiJ_T0019701.1 MGP_WSBEiJ_G0015533.1 mouse_genomes_project 1 66424054 66468107 - MGP_WSBEiJ_P0019701 Lancl1 protein_coding protein_coding MGP_WSBEiJ_T0019702.1 MGP_WSBEiJ_G0015533.1 mouse_genomes_project 1 66424054 66468100 - MGP_WSBEiJ_P0019702 Lancl1 protein_coding protein_coding MGP_WSBEiJ_T0019703.1 MGP_WSBEiJ_G0015533.1 mouse_genomes_project 1 66427990 66468069 - MGP_WSBEiJ_P0019703 Lancl1 protein_coding protein_coding MGP_WSBEiJ_T0019704.1 MGP_WSBEiJ_G0015533.1 mouse_genomes_project 1 66431601 66449210 - Lancl1 protein_coding processed_transcript MGP_WSBEiJ_T0019705.1 MGP_WSBEiJ_G0015533.1 mouse_genomes_project 1 66434543 66468069 - MGP_WSBEiJ_P0019705 Lancl1 protein_coding protein_coding MGP_WSBEiJ_T0019706.1 MGP_WSBEiJ_G0015533.1 mouse_genomes_project 1 66447753 66450356 - Lancl1 protein_coding retained_intron MGP_WSBEiJ_T0000766.1 MGP_WSBEiJ_G0000707.1 mouse_genomes_project 1 196792678 196792811 + TEC TEC MGP_WSBEiJ_T0000757.1 MGP_WSBEiJ_G0000698.1 mouse_genomes_project 1 191666628 191670853 + TEC TEC MGP_WSBEiJ_T0011994.1 MGP_WSBEiJ_G0010124.1 mouse_genomes_project 1 125443530 125444415 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002754.1 MGP_WSBEiJ_G0002618.1 mouse_genomes_project 1 61981468 61984807 - Gm29083 antisense antisense MGP_WSBEiJ_T0000741.1 MGP_WSBEiJ_G0000683.1 mouse_genomes_project 1 186271819 186274044 - TEC TEC MGP_WSBEiJ_T0000631.1 MGP_WSBEiJ_G0000574.1 mouse_genomes_project 1 141520441 141524568 - TEC TEC MGP_WSBEiJ_T0009356.1 MGP_WSBEiJ_G0007513.1 mouse_genomes_project 1 74791171 74791235 - Mir375 miRNA miRNA MGP_WSBEiJ_T0020700.1 MGP_WSBEiJ_G0015727.1 mouse_genomes_project 1 93238860 93246853 - MGP_WSBEiJ_P0020700 Olfr1414 protein_coding protein_coding MGP_WSBEiJ_T0020701.1 MGP_WSBEiJ_G0015727.1 mouse_genomes_project 1 93239229 93246853 - MGP_WSBEiJ_P0020701 Olfr1414 protein_coding protein_coding MGP_WSBEiJ_T0020702.1 MGP_WSBEiJ_G0015727.1 mouse_genomes_project 1 93239229 93240604 - MGP_WSBEiJ_P0020702 Olfr1414 protein_coding protein_coding MGP_WSBEiJ_T0021595.1 MGP_WSBEiJ_G0015928.1 mouse_genomes_project 1 137377788 137390639 + MGP_WSBEiJ_P0021595 Ptpn7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021596.1 MGP_WSBEiJ_G0015928.1 mouse_genomes_project 1 137379188 137385820 + Ptpn7 protein_coding retained_intron MGP_WSBEiJ_T0098779.1 MGP_WSBEiJ_G0037442.1 mouse_genomes_project 1 104001993 104002127 - Gm22034 snoRNA snoRNA MGP_WSBEiJ_T0011882.1 MGP_WSBEiJ_G0010012.1 mouse_genomes_project 1 78636569 78638838 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016428.1 MGP_WSBEiJ_G0014527.1 mouse_genomes_project 1 133978208 134035510 + Gm29103 processed_transcript processed_transcript MGP_WSBEiJ_T0000655.1 MGP_WSBEiJ_G0000598.1 mouse_genomes_project 1 156736825 156738741 + TEC TEC MGP_WSBEiJ_T0020619.1 MGP_WSBEiJ_G0015711.1 mouse_genomes_project 1 91841848 91868898 + MGP_WSBEiJ_P0020619 Ramp1 protein_coding protein_coding MGP_WSBEiJ_T0020620.1 MGP_WSBEiJ_G0015711.1 mouse_genomes_project 1 91842068 91868898 + MGP_WSBEiJ_P0020620 Ramp1 protein_coding protein_coding MGP_WSBEiJ_T0020621.1 MGP_WSBEiJ_G0015711.1 mouse_genomes_project 1 91842072 91888184 + MGP_WSBEiJ_P0020621 Ramp1 protein_coding protein_coding MGP_WSBEiJ_T0021863.1 MGP_WSBEiJ_G0015983.1 mouse_genomes_project 1 153162427 153177546 + MGP_WSBEiJ_P0021863 Pdc protein_coding protein_coding MGP_WSBEiJ_T0021864.1 MGP_WSBEiJ_G0015983.1 mouse_genomes_project 1 153162427 153177545 + MGP_WSBEiJ_P0021864 Pdc protein_coding protein_coding MGP_WSBEiJ_T0021865.1 MGP_WSBEiJ_G0015983.1 mouse_genomes_project 1 153162436 153176962 + MGP_WSBEiJ_P0021865 Pdc protein_coding protein_coding MGP_WSBEiJ_T0021866.1 MGP_WSBEiJ_G0015983.1 mouse_genomes_project 1 153162439 153177543 + MGP_WSBEiJ_P0021866 Pdc protein_coding protein_coding MGP_WSBEiJ_T0100444.1 MGP_WSBEiJ_G0038903.1 mouse_genomes_project 1 185297429 185306492 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011748.1 MGP_WSBEiJ_G0009878.1 mouse_genomes_project 1 32641516 32642162 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012047.1 MGP_WSBEiJ_G0010177.1 mouse_genomes_project 1 154018710 154021263 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021950.1 MGP_WSBEiJ_G0015996.1 mouse_genomes_project 1 155329640 155445822 + MGP_WSBEiJ_P0021950 Colgalt2 protein_coding protein_coding MGP_WSBEiJ_T0021951.1 MGP_WSBEiJ_G0015996.1 mouse_genomes_project 1 155329640 155444945 + MGP_WSBEiJ_P0021951 Colgalt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005846.1 MGP_WSBEiJ_G0004900.1 mouse_genomes_project 1 152230708 152272566 - Gm29398 lincRNA lincRNA MGP_WSBEiJ_T0005847.1 MGP_WSBEiJ_G0004900.1 mouse_genomes_project 1 152238856 152272565 - Gm29398 lincRNA lincRNA MGP_WSBEiJ_T0018507.1 MGP_WSBEiJ_G0015306.1 mouse_genomes_project 1 24244417 24249954 - MGP_WSBEiJ_P0018507 4931408C20Rik protein_coding protein_coding MGP_WSBEiJ_T0012038.1 MGP_WSBEiJ_G0010168.1 mouse_genomes_project 1 151746023 151747493 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000380.1 MGP_WSBEiJ_G0000326.1 mouse_genomes_project 1 22845176 22848609 - TEC TEC MGP_WSBEiJ_T0002937.1 MGP_WSBEiJ_G0002758.1 mouse_genomes_project 1 199696828 199719659 - Gm16897 antisense antisense MGP_WSBEiJ_T0002737.1 MGP_WSBEiJ_G0002606.1 mouse_genomes_project 1 53538696 53596548 + 4930444A19Rik antisense antisense MGP_WSBEiJ_T0002738.1 MGP_WSBEiJ_G0002606.1 mouse_genomes_project 1 53547443 53628098 + 4930444A19Rik antisense antisense MGP_WSBEiJ_T0000614.1 MGP_WSBEiJ_G0000558.1 mouse_genomes_project 1 139639407 139641340 + TEC TEC MGP_WSBEiJ_T0019042.1 MGP_WSBEiJ_G0015409.1 mouse_genomes_project 1 44392235 44392984 - Gm5269 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0019043.1 MGP_WSBEiJ_G0015409.1 mouse_genomes_project 1 44392651 44392789 - MGP_WSBEiJ_P0019043 Gm5269 protein_coding protein_coding MGP_WSBEiJ_T0000332.1 MGP_WSBEiJ_G0000280.1 mouse_genomes_project 1 2003544 2005696 - TEC TEC MGP_WSBEiJ_T0018405.1 MGP_WSBEiJ_G0015280.1 mouse_genomes_project 1 15557451 15558422 - MGP_WSBEiJ_P0018405 Defb18 protein_coding protein_coding MGP_WSBEiJ_T0019809.1 MGP_WSBEiJ_G0015555.1 mouse_genomes_project 1 73951084 73975279 + MGP_WSBEiJ_P0019809 Rufy4 protein_coding protein_coding MGP_WSBEiJ_T0019810.1 MGP_WSBEiJ_G0015555.1 mouse_genomes_project 1 73951122 73974829 + MGP_WSBEiJ_P0019810 Rufy4 protein_coding protein_coding MGP_WSBEiJ_T0022080.1 MGP_WSBEiJ_G0016023.1 mouse_genomes_project 1 158810094 158855324 - MGP_WSBEiJ_P0022080 Lhx4 protein_coding protein_coding MGP_WSBEiJ_T0022081.1 MGP_WSBEiJ_G0016023.1 mouse_genomes_project 1 158816725 158866867 - MGP_WSBEiJ_P0022081 Lhx4 protein_coding protein_coding MGP_WSBEiJ_T0005764.1 MGP_WSBEiJ_G0004835.1 mouse_genomes_project 1 99052237 99059725 + 1810006J02Rik lincRNA lincRNA MGP_WSBEiJ_T0005765.1 MGP_WSBEiJ_G0004835.1 mouse_genomes_project 1 99052248 99066188 + 1810006J02Rik lincRNA lincRNA MGP_WSBEiJ_T0097186.1 MGP_WSBEiJ_G0035867.1 mouse_genomes_project 1 129108455 129108584 + Gm23370 scaRNA scaRNA MGP_WSBEiJ_T0011649.1 MGP_WSBEiJ_G0009779.1 mouse_genomes_project 1 1735840 1737046 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023416.1 MGP_WSBEiJ_G0016327.1 mouse_genomes_project 1 191388591 191391803 + MGP_WSBEiJ_P0023416 D1Pas1 protein_coding protein_coding MGP_WSBEiJ_T0019762.1 MGP_WSBEiJ_G0015543.1 mouse_genomes_project 1 71899747 71960044 - MGP_WSBEiJ_P0019762 Mreg protein_coding protein_coding MGP_WSBEiJ_T0012041.1 MGP_WSBEiJ_G0010171.1 mouse_genomes_project 1 151996855 151998391 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098770.1 MGP_WSBEiJ_G0037433.1 mouse_genomes_project 1 86584965 86585098 - Snora75 snoRNA snoRNA MGP_WSBEiJ_T0018979.1 MGP_WSBEiJ_G0015398.1 mouse_genomes_project 1 42553921 42565243 - MGP_WSBEiJ_P0018979 Mettl21c protein_coding protein_coding MGP_WSBEiJ_T0018980.1 MGP_WSBEiJ_G0015398.1 mouse_genomes_project 1 42554448 42562702 - Mettl21c protein_coding processed_transcript MGP_WSBEiJ_T0018981.1 MGP_WSBEiJ_G0015398.1 mouse_genomes_project 1 42555024 42565271 - Mettl21c protein_coding retained_intron MGP_WSBEiJ_T0019992.1 MGP_WSBEiJ_G0015591.1 mouse_genomes_project 1 75025180 75028114 + Ankzf1 protein_coding retained_intron MGP_WSBEiJ_T0019993.1 MGP_WSBEiJ_G0015591.1 mouse_genomes_project 1 75025189 75028564 + Ankzf1 protein_coding retained_intron MGP_WSBEiJ_T0019994.1 MGP_WSBEiJ_G0015591.1 mouse_genomes_project 1 75025189 75032416 + Ankzf1 protein_coding retained_intron MGP_WSBEiJ_T0019995.1 MGP_WSBEiJ_G0015591.1 mouse_genomes_project 1 75025189 75032416 + Ankzf1 protein_coding retained_intron MGP_WSBEiJ_T0019996.1 MGP_WSBEiJ_G0015591.1 mouse_genomes_project 1 75025189 75032416 + MGP_WSBEiJ_P0019996 Ankzf1 protein_coding protein_coding MGP_WSBEiJ_T0019997.1 MGP_WSBEiJ_G0015591.1 mouse_genomes_project 1 75025189 75032416 + MGP_WSBEiJ_P0019997 Ankzf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019998.1 MGP_WSBEiJ_G0015591.1 mouse_genomes_project 1 75025221 75028564 + MGP_WSBEiJ_P0019998 Ankzf1 protein_coding protein_coding MGP_WSBEiJ_T0019999.1 MGP_WSBEiJ_G0015591.1 mouse_genomes_project 1 75028722 75029685 + Ankzf1 protein_coding retained_intron MGP_WSBEiJ_T0018643.1 MGP_WSBEiJ_G0015333.1 mouse_genomes_project 1 34309978 34318784 - MGP_WSBEiJ_P0018643 Neurl3 protein_coding protein_coding MGP_WSBEiJ_T0018644.1 MGP_WSBEiJ_G0015333.1 mouse_genomes_project 1 34314204 34319884 - MGP_WSBEiJ_P0018644 Neurl3 protein_coding protein_coding MGP_WSBEiJ_T0011871.1 MGP_WSBEiJ_G0010001.1 mouse_genomes_project 1 71413442 71413746 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011665.1 MGP_WSBEiJ_G0009795.1 mouse_genomes_project 1 4370677 4371689 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023527.1 MGP_WSBEiJ_G0016347.1 mouse_genomes_project 1 195801286 195815584 - MGP_WSBEiJ_P0023527 Atf3 protein_coding protein_coding MGP_WSBEiJ_T0023528.1 MGP_WSBEiJ_G0016347.1 mouse_genomes_project 1 195801286 195852964 - MGP_WSBEiJ_P0023528 Atf3 protein_coding protein_coding MGP_WSBEiJ_T0023529.1 MGP_WSBEiJ_G0016347.1 mouse_genomes_project 1 195802415 195815352 - Atf3 protein_coding processed_transcript MGP_WSBEiJ_T0019130.1 MGP_WSBEiJ_G0015425.1 mouse_genomes_project 1 51440603 51511979 - MGP_WSBEiJ_P0019130 Mfsd6 protein_coding protein_coding MGP_WSBEiJ_T0019131.1 MGP_WSBEiJ_G0015425.1 mouse_genomes_project 1 51440615 51511995 - MGP_WSBEiJ_P0019131 Mfsd6 protein_coding protein_coding MGP_WSBEiJ_T0019132.1 MGP_WSBEiJ_G0015425.1 mouse_genomes_project 1 51441752 51444595 - Mfsd6 protein_coding retained_intron MGP_WSBEiJ_T0019133.1 MGP_WSBEiJ_G0015425.1 mouse_genomes_project 1 51444282 51511979 - MGP_WSBEiJ_P0019133 Mfsd6 protein_coding protein_coding MGP_WSBEiJ_T0019134.1 MGP_WSBEiJ_G0015425.1 mouse_genomes_project 1 51445201 51455063 - Mfsd6 protein_coding processed_transcript MGP_WSBEiJ_T0019135.1 MGP_WSBEiJ_G0015425.1 mouse_genomes_project 1 51461322 51511875 - Mfsd6 protein_coding retained_intron MGP_WSBEiJ_T0097519.1 MGP_WSBEiJ_G0036182.1 mouse_genomes_project 1 6967699 6967804 - Gm22607 snRNA snRNA MGP_WSBEiJ_T0022014.1 MGP_WSBEiJ_G0016009.1 mouse_genomes_project 1 156765442 156770546 + MGP_WSBEiJ_P0022014 Rgs16 protein_coding protein_coding MGP_WSBEiJ_T0011660.1 MGP_WSBEiJ_G0009790.1 mouse_genomes_project 1 4038725 4039050 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020945.1 MGP_WSBEiJ_G0015782.1 mouse_genomes_project 1 107313612 107536944 + MGP_WSBEiJ_P0020945 Phlpp1 protein_coding protein_coding MGP_WSBEiJ_T0020946.1 MGP_WSBEiJ_G0015782.1 mouse_genomes_project 1 107424084 107430082 + Phlpp1 protein_coding retained_intron MGP_WSBEiJ_T0020947.1 MGP_WSBEiJ_G0015782.1 mouse_genomes_project 1 107453837 107455602 + Phlpp1 protein_coding processed_transcript MGP_WSBEiJ_T0097518.1 MGP_WSBEiJ_G0036181.1 mouse_genomes_project 1 6561858 6561961 + Gm24765 snRNA snRNA MGP_WSBEiJ_T0019811.1 MGP_WSBEiJ_G0015556.1 mouse_genomes_project 1 73981050 73989238 + MGP_WSBEiJ_P0019811 Cxcr2 protein_coding protein_coding MGP_WSBEiJ_T0011735.1 MGP_WSBEiJ_G0009865.1 mouse_genomes_project 1 31033225 31033976 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018320.1 MGP_WSBEiJ_G0015259.1 mouse_genomes_project 1 10808171 10846240 - MGP_WSBEiJ_P0018320 Lactb2 protein_coding protein_coding MGP_WSBEiJ_T0018321.1 MGP_WSBEiJ_G0015259.1 mouse_genomes_project 1 10814965 10823382 - Lactb2 protein_coding retained_intron MGP_WSBEiJ_T0011709.1 MGP_WSBEiJ_G0009839.1 mouse_genomes_project 1 19492505 19493058 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011750.1 MGP_WSBEiJ_G0009880.1 mouse_genomes_project 1 32749218 32749511 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022794.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175071967 175080261 + MGP_WSBEiJ_P0022794 Usf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022795.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175071967 175081365 + MGP_WSBEiJ_P0022795 Usf1 protein_coding protein_coding MGP_WSBEiJ_T0022796.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175071967 175079113 + MGP_WSBEiJ_P0022796 Usf1 protein_coding protein_coding MGP_WSBEiJ_T0022797.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175071980 175077872 + Usf1 protein_coding processed_transcript MGP_WSBEiJ_T0022798.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175071988 175079496 + Usf1 protein_coding retained_intron MGP_WSBEiJ_T0022799.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175072028 175077748 + Usf1 protein_coding retained_intron MGP_WSBEiJ_T0022800.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175072038 175080980 + MGP_WSBEiJ_P0022800 Usf1 protein_coding protein_coding MGP_WSBEiJ_T0022801.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175072335 175080966 + MGP_WSBEiJ_P0022801 Usf1 protein_coding protein_coding MGP_WSBEiJ_T0022802.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175079469 175080070 + Usf1 protein_coding retained_intron MGP_WSBEiJ_T0022803.1 MGP_WSBEiJ_G0016168.1 mouse_genomes_project 1 175079599 175080571 + Usf1 protein_coding retained_intron MGP_WSBEiJ_T0012008.1 MGP_WSBEiJ_G0010138.1 mouse_genomes_project 1 135651771 135652534 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018748.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35423848 35476038 + Inpp4a protein_coding processed_transcript MGP_WSBEiJ_T0018749.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35423874 35540082 + MGP_WSBEiJ_P0018749 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018750.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35423876 35426750 + Inpp4a protein_coding retained_intron MGP_WSBEiJ_T0018751.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35423898 35528916 + MGP_WSBEiJ_P0018751 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018752.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35424291 35538082 + MGP_WSBEiJ_P0018752 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018753.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35424291 35537638 + MGP_WSBEiJ_P0018753 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018754.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35484916 35533039 + MGP_WSBEiJ_P0018754 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018755.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35484916 35537818 + MGP_WSBEiJ_P0018755 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018756.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35485438 35537608 + MGP_WSBEiJ_P0018756 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018757.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35497925 35533783 + MGP_WSBEiJ_P0018757 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018758.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35497925 35533791 + MGP_WSBEiJ_P0018758 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018759.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35497929 35533788 + MGP_WSBEiJ_P0018759 Inpp4a protein_coding protein_coding MGP_WSBEiJ_T0018760.1 MGP_WSBEiJ_G0015350.1 mouse_genomes_project 1 35507140 35509544 + Inpp4a protein_coding retained_intron MGP_WSBEiJ_T0021384.1 MGP_WSBEiJ_G0015881.1 mouse_genomes_project 1 134358335 134376384 + MGP_WSBEiJ_P0021384 Nuak2 protein_coding protein_coding MGP_WSBEiJ_T0021385.1 MGP_WSBEiJ_G0015881.1 mouse_genomes_project 1 134358335 134376579 + MGP_WSBEiJ_P0021385 Nuak2 protein_coding protein_coding MGP_WSBEiJ_T0021386.1 MGP_WSBEiJ_G0015881.1 mouse_genomes_project 1 134358374 134359946 + Nuak2 protein_coding processed_transcript MGP_WSBEiJ_T0021387.1 MGP_WSBEiJ_G0015881.1 mouse_genomes_project 1 134369801 134373545 + Nuak2 protein_coding retained_intron MGP_WSBEiJ_T0009396.1 MGP_WSBEiJ_G0007553.1 mouse_genomes_project 1 162626540 162626606 + Mir1843b miRNA miRNA MGP_WSBEiJ_T0097532.1 MGP_WSBEiJ_G0036195.1 mouse_genomes_project 1 31922960 31923053 - Gm23792 snRNA snRNA MGP_WSBEiJ_T0022630.1 MGP_WSBEiJ_G0016132.1 mouse_genomes_project 1 173730332 173766189 - MGP_WSBEiJ_P0022630 Uap1 protein_coding protein_coding MGP_WSBEiJ_T0022631.1 MGP_WSBEiJ_G0016132.1 mouse_genomes_project 1 173730396 173766178 - MGP_WSBEiJ_P0022631 Uap1 protein_coding protein_coding MGP_WSBEiJ_T0022632.1 MGP_WSBEiJ_G0016132.1 mouse_genomes_project 1 173730397 173766178 - MGP_WSBEiJ_P0022632 Uap1 protein_coding protein_coding MGP_WSBEiJ_T0022633.1 MGP_WSBEiJ_G0016132.1 mouse_genomes_project 1 173730428 173732108 - Uap1 protein_coding retained_intron MGP_WSBEiJ_T0022634.1 MGP_WSBEiJ_G0016132.1 mouse_genomes_project 1 173738017 173766024 - Uap1 protein_coding retained_intron MGP_WSBEiJ_T0022635.1 MGP_WSBEiJ_G0016132.1 mouse_genomes_project 1 173749583 173750159 - Uap1 protein_coding processed_transcript MGP_WSBEiJ_T0022636.1 MGP_WSBEiJ_G0016132.1 mouse_genomes_project 1 173749601 173765998 - Uap1 protein_coding processed_transcript MGP_WSBEiJ_T0022637.1 MGP_WSBEiJ_G0016132.1 mouse_genomes_project 1 173754536 173766021 - Uap1 protein_coding retained_intron MGP_WSBEiJ_T0020716.1 MGP_WSBEiJ_G0015735.1 mouse_genomes_project 1 93564206 93595661 + MGP_WSBEiJ_P0020716 Gpc1 protein_coding protein_coding MGP_WSBEiJ_T0020717.1 MGP_WSBEiJ_G0015735.1 mouse_genomes_project 1 93564530 93568239 + Gpc1 protein_coding processed_transcript MGP_WSBEiJ_T0020718.1 MGP_WSBEiJ_G0015735.1 mouse_genomes_project 1 93586848 93589619 + Gpc1 protein_coding retained_intron MGP_WSBEiJ_T0020719.1 MGP_WSBEiJ_G0015735.1 mouse_genomes_project 1 93590212 93592407 + Gpc1 protein_coding retained_intron MGP_WSBEiJ_T0020720.1 MGP_WSBEiJ_G0015735.1 mouse_genomes_project 1 93590418 93592480 + Gpc1 protein_coding retained_intron MGP_WSBEiJ_T0000547.1 MGP_WSBEiJ_G0000492.1 mouse_genomes_project 1 104737988 104740591 + TEC TEC MGP_WSBEiJ_T0097187.1 MGP_WSBEiJ_G0035868.1 mouse_genomes_project 1 162626465 162626605 + Scarna3a scaRNA scaRNA MGP_WSBEiJ_T0012074.1 MGP_WSBEiJ_G0010204.1 mouse_genomes_project 1 165705764 165706189 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099977.1 MGP_WSBEiJ_G0038634.1 mouse_genomes_project 1 160589784 160598044 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099978.1 MGP_WSBEiJ_G0038634.1 mouse_genomes_project 1 160590072 160598041 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099979.1 MGP_WSBEiJ_G0038634.1 mouse_genomes_project 1 160590421 160590905 + transcribed_processed_pseudogene TEC MGP_WSBEiJ_T0099980.1 MGP_WSBEiJ_G0038634.1 mouse_genomes_project 1 160597709 160597960 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0002789.1 MGP_WSBEiJ_G0002645.1 mouse_genomes_project 1 93646681 93649067 - 5033417F24Rik antisense antisense MGP_WSBEiJ_T0022624.1 MGP_WSBEiJ_G0016131.1 mouse_genomes_project 1 173557183 173706190 - MGP_WSBEiJ_P0022624 Ddr2 protein_coding protein_coding MGP_WSBEiJ_T0022625.1 MGP_WSBEiJ_G0016131.1 mouse_genomes_project 1 173557184 173685907 - MGP_WSBEiJ_P0022625 Ddr2 protein_coding protein_coding MGP_WSBEiJ_T0022626.1 MGP_WSBEiJ_G0016131.1 mouse_genomes_project 1 173562834 173706130 - MGP_WSBEiJ_P0022626 Ddr2 protein_coding protein_coding MGP_WSBEiJ_T0022627.1 MGP_WSBEiJ_G0016131.1 mouse_genomes_project 1 173597729 173706358 - MGP_WSBEiJ_P0022627 Ddr2 protein_coding protein_coding MGP_WSBEiJ_T0022628.1 MGP_WSBEiJ_G0016131.1 mouse_genomes_project 1 173629774 173706391 - Ddr2 protein_coding retained_intron MGP_WSBEiJ_T0022629.1 MGP_WSBEiJ_G0016131.1 mouse_genomes_project 1 173680616 173694971 - Ddr2 protein_coding processed_transcript MGP_WSBEiJ_T0097553.1 MGP_WSBEiJ_G0036216.1 mouse_genomes_project 1 77826612 77826776 - Gm26263 snRNA snRNA MGP_WSBEiJ_T0011958.1 MGP_WSBEiJ_G0010088.1 mouse_genomes_project 1 113463099 113463942 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023642.1 MGP_WSBEiJ_G0016368.1 mouse_genomes_project 1 197907350 197934349 - MGP_WSBEiJ_P0023642 Hsd11b1 protein_coding protein_coding MGP_WSBEiJ_T0023643.1 MGP_WSBEiJ_G0016368.1 mouse_genomes_project 1 197907398 197931967 - MGP_WSBEiJ_P0023643 Hsd11b1 protein_coding protein_coding MGP_WSBEiJ_T0023644.1 MGP_WSBEiJ_G0016368.1 mouse_genomes_project 1 197907405 197958776 - MGP_WSBEiJ_P0023644 Hsd11b1 protein_coding protein_coding MGP_WSBEiJ_T0023645.1 MGP_WSBEiJ_G0016368.1 mouse_genomes_project 1 197909364 197935280 - MGP_WSBEiJ_P0023645 Hsd11b1 protein_coding protein_coding MGP_WSBEiJ_T0023646.1 MGP_WSBEiJ_G0016368.1 mouse_genomes_project 1 197916682 197930770 - MGP_WSBEiJ_P0023646 Hsd11b1 protein_coding protein_coding MGP_WSBEiJ_T0023647.1 MGP_WSBEiJ_G0016368.1 mouse_genomes_project 1 197927402 197929383 - Hsd11b1 protein_coding retained_intron MGP_WSBEiJ_T0023648.1 MGP_WSBEiJ_G0016368.1 mouse_genomes_project 1 197928629 197931793 - Hsd11b1 protein_coding processed_transcript MGP_WSBEiJ_T0011905.1 MGP_WSBEiJ_G0010035.1 mouse_genomes_project 1 89449582 89450837 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023301.1 MGP_WSBEiJ_G0016300.1 mouse_genomes_project 1 186726945 186782766 + MGP_WSBEiJ_P0023301 Trp53bp2 protein_coding protein_coding MGP_WSBEiJ_T0023302.1 MGP_WSBEiJ_G0016300.1 mouse_genomes_project 1 186760996 186782115 + Trp53bp2 protein_coding retained_intron MGP_WSBEiJ_T0023303.1 MGP_WSBEiJ_G0016300.1 mouse_genomes_project 1 186763624 186768366 + MGP_WSBEiJ_P0023303 Trp53bp2 protein_coding protein_coding MGP_WSBEiJ_T0000714.1 MGP_WSBEiJ_G0000657.1 mouse_genomes_project 1 179915856 179917804 - TEC TEC MGP_WSBEiJ_T0009394.1 MGP_WSBEiJ_G0007551.1 mouse_genomes_project 1 158401718 158401842 + Gm22569 miRNA miRNA MGP_WSBEiJ_T0000377.1 MGP_WSBEiJ_G0000323.1 mouse_genomes_project 1 22794447 22795960 - TEC TEC MGP_WSBEiJ_T0097566.1 MGP_WSBEiJ_G0036229.1 mouse_genomes_project 1 120973801 120973905 + Gm25322 snRNA snRNA MGP_WSBEiJ_T0022811.1 MGP_WSBEiJ_G0016172.1 mouse_genomes_project 1 175263053 175348800 + MGP_WSBEiJ_P0022811 Cd244 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022812.1 MGP_WSBEiJ_G0016172.1 mouse_genomes_project 1 175263053 175324153 + MGP_WSBEiJ_P0022812 Cd244 protein_coding protein_coding MGP_WSBEiJ_T0022813.1 MGP_WSBEiJ_G0016172.1 mouse_genomes_project 1 175263054 175318395 + Cd244 protein_coding retained_intron MGP_WSBEiJ_T0022814.1 MGP_WSBEiJ_G0016172.1 mouse_genomes_project 1 175319212 175324153 + Cd244 protein_coding retained_intron MGP_WSBEiJ_T0098749.1 MGP_WSBEiJ_G0037412.1 mouse_genomes_project 1 42442670 42442795 + Gm26352 snoRNA snoRNA MGP_WSBEiJ_T0022730.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174926766 174933301 + MGP_WSBEiJ_P0022730 B4galt3 protein_coding protein_coding MGP_WSBEiJ_T0022731.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174926777 174930718 + MGP_WSBEiJ_P0022731 B4galt3 protein_coding protein_coding MGP_WSBEiJ_T0022732.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174926781 174933302 + MGP_WSBEiJ_P0022732 B4galt3 protein_coding protein_coding MGP_WSBEiJ_T0022733.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174926781 174928369 + MGP_WSBEiJ_P0022733 B4galt3 protein_coding protein_coding MGP_WSBEiJ_T0022734.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174926792 174928470 + B4galt3 protein_coding retained_intron MGP_WSBEiJ_T0022735.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174926803 174933301 + MGP_WSBEiJ_P0022735 B4galt3 protein_coding protein_coding MGP_WSBEiJ_T0022736.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174926812 174933302 + B4galt3 protein_coding retained_intron MGP_WSBEiJ_T0022737.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174926846 174927798 + B4galt3 protein_coding processed_transcript MGP_WSBEiJ_T0022738.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174927256 174928072 + B4galt3 protein_coding retained_intron MGP_WSBEiJ_T0022739.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174928069 174929034 + MGP_WSBEiJ_P0022739 B4galt3 protein_coding protein_coding MGP_WSBEiJ_T0022740.1 MGP_WSBEiJ_G0016158.1 mouse_genomes_project 1 174929945 174933300 + B4galt3 protein_coding retained_intron MGP_WSBEiJ_T0018322.1 MGP_WSBEiJ_G0015260.1 mouse_genomes_project 1 10855240 10901205 + MGP_WSBEiJ_P0018322 Xkr9 protein_coding protein_coding MGP_WSBEiJ_T0005571.1 MGP_WSBEiJ_G0004684.1 mouse_genomes_project 1 13909686 13914413 + D030040B21Rik lincRNA lincRNA MGP_WSBEiJ_T0002706.1 MGP_WSBEiJ_G0002580.1 mouse_genomes_project 1 32402640 32408052 - Gm28306 antisense antisense MGP_WSBEiJ_T0000747.1 MGP_WSBEiJ_G0000688.1 mouse_genomes_project 1 187014850 187016804 + TEC TEC MGP_WSBEiJ_T0005592.1 MGP_WSBEiJ_G0004704.1 mouse_genomes_project 1 32385965 32392381 - Gm37233 lincRNA lincRNA MGP_WSBEiJ_T0002846.1 MGP_WSBEiJ_G0002686.1 mouse_genomes_project 1 156712726 156714924 - Gm29529 antisense antisense MGP_WSBEiJ_T0021045.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120245988 120471374 - MGP_WSBEiJ_P0021045 Gli2 protein_coding protein_coding MGP_WSBEiJ_T0021046.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120260325 120471094 - MGP_WSBEiJ_P0021046 Gli2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021047.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120260325 120471094 - MGP_WSBEiJ_P0021047 Gli2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021048.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120260325 120471094 - MGP_WSBEiJ_P0021048 Gli2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021049.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120260325 120471094 - MGP_WSBEiJ_P0021049 Gli2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021050.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120260325 120471094 - MGP_WSBEiJ_P0021050 Gli2 protein_coding protein_coding MGP_WSBEiJ_T0021051.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120260327 120471094 - MGP_WSBEiJ_P0021051 Gli2 protein_coding protein_coding MGP_WSBEiJ_T0021052.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120260327 120471094 - MGP_WSBEiJ_P0021052 Gli2 protein_coding protein_coding MGP_WSBEiJ_T0021053.1 MGP_WSBEiJ_G0015805.1 mouse_genomes_project 1 120281836 120396834 - Gli2 protein_coding processed_transcript MGP_WSBEiJ_T0002885.1 MGP_WSBEiJ_G0002717.1 mouse_genomes_project 1 175834884 175837647 - Gm37756 antisense antisense MGP_WSBEiJ_T0005778.1 MGP_WSBEiJ_G0004846.1 mouse_genomes_project 1 109147748 109176547 + D830032E09Rik lincRNA lincRNA MGP_WSBEiJ_T0005779.1 MGP_WSBEiJ_G0004846.1 mouse_genomes_project 1 109147774 109176560 + D830032E09Rik lincRNA lincRNA MGP_WSBEiJ_T0005780.1 MGP_WSBEiJ_G0004846.1 mouse_genomes_project 1 109162340 109257507 + D830032E09Rik lincRNA lincRNA MGP_WSBEiJ_T0000412.1 MGP_WSBEiJ_G0000357.1 mouse_genomes_project 1 31976091 31979037 + TEC TEC MGP_WSBEiJ_T0000355.1 MGP_WSBEiJ_G0000303.1 mouse_genomes_project 1 10529349 10533910 - TEC TEC MGP_WSBEiJ_T0000657.1 MGP_WSBEiJ_G0000600.1 mouse_genomes_project 1 158905712 158905947 + TEC TEC MGP_WSBEiJ_T0022431.1 MGP_WSBEiJ_G0016086.1 mouse_genomes_project 1 167495893 167518094 + MGP_WSBEiJ_P0022431 Sell protein_coding protein_coding MGP_WSBEiJ_T0022432.1 MGP_WSBEiJ_G0016086.1 mouse_genomes_project 1 167495996 167514585 + MGP_WSBEiJ_P0022432 Sell protein_coding protein_coding MGP_WSBEiJ_T0022433.1 MGP_WSBEiJ_G0016086.1 mouse_genomes_project 1 167496100 167513605 + MGP_WSBEiJ_P0022433 Sell protein_coding protein_coding MGP_WSBEiJ_T0022434.1 MGP_WSBEiJ_G0016086.1 mouse_genomes_project 1 167496100 167513609 + MGP_WSBEiJ_P0022434 Sell protein_coding unknown_likely_coding MGP_WSBEiJ_T0022435.1 MGP_WSBEiJ_G0016086.1 mouse_genomes_project 1 167502873 167513909 + MGP_WSBEiJ_P0022435 Sell protein_coding protein_coding MGP_WSBEiJ_T0005710.1 MGP_WSBEiJ_G0004787.1 mouse_genomes_project 1 76297728 76403297 + Gm29069 lincRNA lincRNA MGP_WSBEiJ_T0005636.1 MGP_WSBEiJ_G0004732.1 mouse_genomes_project 1 47885492 47979283 + C230029F24Rik lincRNA lincRNA MGP_WSBEiJ_T0005637.1 MGP_WSBEiJ_G0004732.1 mouse_genomes_project 1 47885492 47977094 + C230029F24Rik lincRNA lincRNA MGP_WSBEiJ_T0000759.1 MGP_WSBEiJ_G0000700.1 mouse_genomes_project 1 192634655 192637092 + TEC TEC MGP_WSBEiJ_T0011861.1 MGP_WSBEiJ_G0009991.1 mouse_genomes_project 1 65455064 65455402 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019007.1 MGP_WSBEiJ_G0015403.1 mouse_genomes_project 1 42695604 42697418 + Ercc5 protein_coding retained_intron MGP_WSBEiJ_T0019008.1 MGP_WSBEiJ_G0015403.1 mouse_genomes_project 1 42695707 42729221 + Ercc5 protein_coding retained_intron MGP_WSBEiJ_T0019009.1 MGP_WSBEiJ_G0015403.1 mouse_genomes_project 1 42695707 42729221 + MGP_WSBEiJ_P0019009 Ercc5 protein_coding protein_coding MGP_WSBEiJ_T0019010.1 MGP_WSBEiJ_G0015403.1 mouse_genomes_project 1 42695769 42709403 + Ercc5 protein_coding processed_transcript MGP_WSBEiJ_T0019011.1 MGP_WSBEiJ_G0015403.1 mouse_genomes_project 1 42695792 42705813 + Ercc5 protein_coding processed_transcript MGP_WSBEiJ_T0019012.1 MGP_WSBEiJ_G0015403.1 mouse_genomes_project 1 42704502 42714576 + Ercc5 protein_coding retained_intron MGP_WSBEiJ_T0019013.1 MGP_WSBEiJ_G0015403.1 mouse_genomes_project 1 42706387 42714795 + Ercc5 protein_coding retained_intron MGP_WSBEiJ_T0098813.1 MGP_WSBEiJ_G0037476.1 mouse_genomes_project 1 164399666 164399743 + Snord47 snoRNA snoRNA MGP_WSBEiJ_T0096887.1 MGP_WSBEiJ_G0035568.1 mouse_genomes_project 1 141309300 141309416 - n-R5s217 rRNA rRNA MGP_WSBEiJ_T0012003.1 MGP_WSBEiJ_G0010133.1 mouse_genomes_project 1 133224717 133225930 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022114.1 MGP_WSBEiJ_G0016029.1 mouse_genomes_project 1 159346464 159395707 - MGP_WSBEiJ_P0022114 Tdrd5 protein_coding protein_coding MGP_WSBEiJ_T0022115.1 MGP_WSBEiJ_G0016029.1 mouse_genomes_project 1 159346466 159395391 - MGP_WSBEiJ_P0022115 Tdrd5 protein_coding protein_coding MGP_WSBEiJ_T0022116.1 MGP_WSBEiJ_G0016029.1 mouse_genomes_project 1 159350959 159354697 - Tdrd5 protein_coding processed_transcript MGP_WSBEiJ_T0022117.1 MGP_WSBEiJ_G0016029.1 mouse_genomes_project 1 159358200 159366501 - Tdrd5 protein_coding retained_intron MGP_WSBEiJ_T0022118.1 MGP_WSBEiJ_G0016029.1 mouse_genomes_project 1 159386204 159395649 - MGP_WSBEiJ_P0022118 Tdrd5 protein_coding protein_coding MGP_WSBEiJ_T0020709.1 MGP_WSBEiJ_G0015733.1 mouse_genomes_project 1 93360613 93363323 - protein_coding retained_intron MGP_WSBEiJ_T0020710.1 MGP_WSBEiJ_G0015733.1 mouse_genomes_project 1 93360613 93365315 - MGP_WSBEiJ_P0020710 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020711.1 MGP_WSBEiJ_G0015733.1 mouse_genomes_project 1 93360613 93365377 - MGP_WSBEiJ_P0020711 protein_coding protein_coding MGP_WSBEiJ_T0020712.1 MGP_WSBEiJ_G0015733.1 mouse_genomes_project 1 93360613 93363956 - MGP_WSBEiJ_P0020712 protein_coding protein_coding MGP_WSBEiJ_T0020713.1 MGP_WSBEiJ_G0015733.1 mouse_genomes_project 1 93362783 93365377 - protein_coding retained_intron MGP_WSBEiJ_T0023260.1 MGP_WSBEiJ_G0016292.1 mouse_genomes_project 1 185768748 185770567 - MGP_WSBEiJ_P0023260 Ccdc121 protein_coding protein_coding MGP_WSBEiJ_T0021706.1 MGP_WSBEiJ_G0015950.1 mouse_genomes_project 1 138535287 138555702 - MGP_WSBEiJ_P0021706 5730559C18Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0021707.1 MGP_WSBEiJ_G0015950.1 mouse_genomes_project 1 138535290 138556053 - MGP_WSBEiJ_P0021707 5730559C18Rik protein_coding protein_coding MGP_WSBEiJ_T0021708.1 MGP_WSBEiJ_G0015950.1 mouse_genomes_project 1 138542017 138552077 - MGP_WSBEiJ_P0021708 5730559C18Rik protein_coding protein_coding MGP_WSBEiJ_T0021709.1 MGP_WSBEiJ_G0015950.1 mouse_genomes_project 1 138542055 138552098 - MGP_WSBEiJ_P0021709 5730559C18Rik protein_coding protein_coding MGP_WSBEiJ_T0021710.1 MGP_WSBEiJ_G0015950.1 mouse_genomes_project 1 138545302 138549396 - 5730559C18Rik protein_coding retained_intron MGP_WSBEiJ_T0021711.1 MGP_WSBEiJ_G0015950.1 mouse_genomes_project 1 138547926 138555908 - MGP_WSBEiJ_P0021711 5730559C18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021712.1 MGP_WSBEiJ_G0015950.1 mouse_genomes_project 1 138547947 138551807 - MGP_WSBEiJ_P0021712 5730559C18Rik protein_coding protein_coding MGP_WSBEiJ_T0011781.1 MGP_WSBEiJ_G0009911.1 mouse_genomes_project 1 44267071 44268230 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011812.1 MGP_WSBEiJ_G0009942.1 mouse_genomes_project 1 53419827 53420406 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018406.1 MGP_WSBEiJ_G0015281.1 mouse_genomes_project 1 15576710 15591685 - MGP_WSBEiJ_P0018406 Defb41 protein_coding protein_coding MGP_WSBEiJ_T0018407.1 MGP_WSBEiJ_G0015281.1 mouse_genomes_project 1 15587064 15591627 - MGP_WSBEiJ_P0018407 Defb41 protein_coding protein_coding MGP_WSBEiJ_T0000764.1 MGP_WSBEiJ_G0000705.1 mouse_genomes_project 1 196195890 196196901 - TEC TEC MGP_WSBEiJ_T0000723.1 MGP_WSBEiJ_G0000666.1 mouse_genomes_project 1 181039519 181041051 - TEC TEC MGP_WSBEiJ_T0002785.1 MGP_WSBEiJ_G0002641.1 mouse_genomes_project 1 92494848 92499267 - Gm29100 antisense antisense MGP_WSBEiJ_T0000437.1 MGP_WSBEiJ_G0000382.1 mouse_genomes_project 1 45483737 45487593 - TEC TEC MGP_WSBEiJ_T0019936.1 MGP_WSBEiJ_G0015579.1 mouse_genomes_project 1 74740488 74743287 + MGP_WSBEiJ_P0019936 Cdk5r2 protein_coding protein_coding MGP_WSBEiJ_T0019246.1 MGP_WSBEiJ_G0015450.1 mouse_genomes_project 1 54140907 54195050 - MGP_WSBEiJ_P0019246 Boll protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019247.1 MGP_WSBEiJ_G0015450.1 mouse_genomes_project 1 54163821 54265345 - MGP_WSBEiJ_P0019247 Boll protein_coding protein_coding MGP_WSBEiJ_T0019248.1 MGP_WSBEiJ_G0015450.1 mouse_genomes_project 1 54194940 54267330 - MGP_WSBEiJ_P0019248 Boll protein_coding protein_coding MGP_WSBEiJ_T0019249.1 MGP_WSBEiJ_G0015450.1 mouse_genomes_project 1 54194940 54267923 - MGP_WSBEiJ_P0019249 Boll protein_coding protein_coding MGP_WSBEiJ_T0019250.1 MGP_WSBEiJ_G0015450.1 mouse_genomes_project 1 54194940 54267923 - MGP_WSBEiJ_P0019250 Boll protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019251.1 MGP_WSBEiJ_G0015450.1 mouse_genomes_project 1 54247275 54268073 - MGP_WSBEiJ_P0019251 Boll protein_coding protein_coding MGP_WSBEiJ_T0019252.1 MGP_WSBEiJ_G0015450.1 mouse_genomes_project 1 54251875 54265345 - Boll protein_coding processed_transcript MGP_WSBEiJ_T0097548.1 MGP_WSBEiJ_G0036211.1 mouse_genomes_project 1 70249130 70249237 + Gm23422 snRNA snRNA MGP_WSBEiJ_T0005669.1 MGP_WSBEiJ_G0004758.1 mouse_genomes_project 1 60846342 60850468 - 4930587A21Rik lincRNA lincRNA MGP_WSBEiJ_T0000476.1 MGP_WSBEiJ_G0000421.1 mouse_genomes_project 1 66238902 66243604 - TEC TEC MGP_WSBEiJ_T0012030.1 MGP_WSBEiJ_G0010160.1 mouse_genomes_project 1 147573393 147574537 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000431.1 MGP_WSBEiJ_G0000376.1 mouse_genomes_project 1 40948274 40952123 + TEC TEC MGP_WSBEiJ_T0002703.1 MGP_WSBEiJ_G0002577.1 mouse_genomes_project 1 17699378 17738467 + 4930486I03Rik antisense antisense MGP_WSBEiJ_T0000372.1 MGP_WSBEiJ_G0000320.1 mouse_genomes_project 1 20712957 20713680 - TEC TEC MGP_WSBEiJ_T0000373.1 MGP_WSBEiJ_G0000320.1 mouse_genomes_project 1 20713259 20713679 - TEC TEC MGP_WSBEiJ_T0016490.1 MGP_WSBEiJ_G0014543.1 mouse_genomes_project 1 176303184 176316837 - 4933439K11Rik processed_transcript lincRNA MGP_WSBEiJ_T0016491.1 MGP_WSBEiJ_G0014543.1 mouse_genomes_project 1 176306699 176316974 - 4933439K11Rik processed_transcript lincRNA MGP_WSBEiJ_T0016492.1 MGP_WSBEiJ_G0014543.1 mouse_genomes_project 1 176315417 176324247 - 4933439K11Rik processed_transcript antisense MGP_WSBEiJ_T0009397.1 MGP_WSBEiJ_G0007554.1 mouse_genomes_project 1 163619808 163619917 - Mir1927 miRNA miRNA MGP_WSBEiJ_T0011843.1 MGP_WSBEiJ_G0009973.1 mouse_genomes_project 1 60783418 60783808 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012139.1 MGP_WSBEiJ_G0010269.1 mouse_genomes_project 1 198571303 198572231 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100211.1 MGP_WSBEiJ_G0038767.1 mouse_genomes_project 1 177266271 177270554 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0012089.1 MGP_WSBEiJ_G0010219.1 mouse_genomes_project 1 173140371 173140955 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018090.1 MGP_WSBEiJ_G0015221.1 mouse_genomes_project 1 241586 252034 - Xkr4 protein_coding processed_transcript MGP_WSBEiJ_T0018091.1 MGP_WSBEiJ_G0015221.1 mouse_genomes_project 1 242209 251322 - Xkr4 protein_coding processed_transcript MGP_WSBEiJ_T0018092.1 MGP_WSBEiJ_G0015221.1 mouse_genomes_project 1 250171 702912 - MGP_WSBEiJ_P0018092 Xkr4 protein_coding protein_coding MGP_WSBEiJ_T0022643.1 MGP_WSBEiJ_G0016137.1 mouse_genomes_project 1 173910176 173935735 - Nos1ap protein_coding processed_transcript MGP_WSBEiJ_T0022645.1 MGP_WSBEiJ_G0016137.1 mouse_genomes_project 1 173925559 174218562 - MGP_WSBEiJ_P0022645 Nos1ap protein_coding protein_coding MGP_WSBEiJ_T0022646.1 MGP_WSBEiJ_G0016137.1 mouse_genomes_project 1 173925599 173928882 - Nos1ap protein_coding retained_intron MGP_WSBEiJ_T0022647.1 MGP_WSBEiJ_G0016137.1 mouse_genomes_project 1 173926812 173932444 - Nos1ap protein_coding processed_transcript MGP_WSBEiJ_T0022648.1 MGP_WSBEiJ_G0016137.1 mouse_genomes_project 1 173935547 174218065 - MGP_WSBEiJ_P0022648 Nos1ap protein_coding protein_coding MGP_WSBEiJ_T0022649.1 MGP_WSBEiJ_G0016137.1 mouse_genomes_project 1 173935693 174217998 - MGP_WSBEiJ_P0022649 Nos1ap protein_coding protein_coding MGP_WSBEiJ_T0022650.1 MGP_WSBEiJ_G0016137.1 mouse_genomes_project 1 173947447 174073921 - Nos1ap protein_coding processed_transcript MGP_WSBEiJ_T0022651.1 MGP_WSBEiJ_G0016137.1 mouse_genomes_project 1 173985877 174218550 - Nos1ap protein_coding retained_intron MGP_WSBEiJ_T0012040.1 MGP_WSBEiJ_G0010170.1 mouse_genomes_project 1 151848729 151850732 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011763.1 MGP_WSBEiJ_G0009893.1 mouse_genomes_project 1 39170721 39171217 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098728.1 MGP_WSBEiJ_G0037391.1 mouse_genomes_project 1 8060192 8060283 + Gm22963 snoRNA snoRNA MGP_WSBEiJ_T0011793.1 MGP_WSBEiJ_G0009923.1 mouse_genomes_project 1 47876258 47877251 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005733.1 MGP_WSBEiJ_G0004806.1 mouse_genomes_project 1 88940221 88947390 + Gm28888 lincRNA lincRNA MGP_WSBEiJ_T0098726.1 MGP_WSBEiJ_G0037389.1 mouse_genomes_project 1 4321265 4321395 + Gm23274 snoRNA snoRNA MGP_WSBEiJ_T0000601.1 MGP_WSBEiJ_G0000546.1 mouse_genomes_project 1 135013199 135014999 - TEC TEC MGP_WSBEiJ_T0005952.1 MGP_WSBEiJ_G0004982.1 mouse_genomes_project 1 190915607 190967153 - A730004F24Rik lincRNA lincRNA MGP_WSBEiJ_T0005953.1 MGP_WSBEiJ_G0004982.1 mouse_genomes_project 1 190915651 190967362 - A730004F24Rik lincRNA lincRNA MGP_WSBEiJ_T0019582.1 MGP_WSBEiJ_G0015508.1 mouse_genomes_project 1 63084617 63101807 - MGP_WSBEiJ_P0019582 4933402D24Rik protein_coding protein_coding MGP_WSBEiJ_T0011701.1 MGP_WSBEiJ_G0009831.1 mouse_genomes_project 1 16403511 16403790 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000499.1 MGP_WSBEiJ_G0000444.1 mouse_genomes_project 1 80236210 80237363 - TEC TEC MGP_WSBEiJ_T0021231.1 MGP_WSBEiJ_G0015843.1 mouse_genomes_project 1 130419561 130424968 - MGP_WSBEiJ_P0021231 Cxcr4 protein_coding protein_coding MGP_WSBEiJ_T0021232.1 MGP_WSBEiJ_G0015843.1 mouse_genomes_project 1 130421722 130424971 - MGP_WSBEiJ_P0021232 Cxcr4 protein_coding protein_coding MGP_WSBEiJ_T0005702.1 MGP_WSBEiJ_G0004782.1 mouse_genomes_project 1 73336978 73340473 - C530043A13Rik lincRNA lincRNA MGP_WSBEiJ_T0005703.1 MGP_WSBEiJ_G0004782.1 mouse_genomes_project 1 73336980 73340306 - C530043A13Rik lincRNA lincRNA MGP_WSBEiJ_T0005704.1 MGP_WSBEiJ_G0004782.1 mouse_genomes_project 1 73338077 73345098 - C530043A13Rik lincRNA lincRNA MGP_WSBEiJ_T0021147.1 MGP_WSBEiJ_G0015828.1 mouse_genomes_project 1 127387232 127597204 + MGP_WSBEiJ_P0021147 Gpr39 protein_coding protein_coding MGP_WSBEiJ_T0021148.1 MGP_WSBEiJ_G0015828.1 mouse_genomes_project 1 127562501 127596515 + Gpr39 protein_coding processed_transcript MGP_WSBEiJ_T0005656.1 MGP_WSBEiJ_G0004747.1 mouse_genomes_project 1 56318998 56337312 - 4930558J18Rik lincRNA lincRNA MGP_WSBEiJ_T0002781.1 MGP_WSBEiJ_G0002637.1 mouse_genomes_project 1 87585924 87586618 - Efhd1os antisense antisense MGP_WSBEiJ_T0019686.1 MGP_WSBEiJ_G0015530.1 mouse_genomes_project 1 66134905 66224681 - MGP_WSBEiJ_P0019686 Kansl1l protein_coding protein_coding MGP_WSBEiJ_T0019687.1 MGP_WSBEiJ_G0015530.1 mouse_genomes_project 1 66134955 66235231 - MGP_WSBEiJ_P0019687 Kansl1l protein_coding protein_coding MGP_WSBEiJ_T0019688.1 MGP_WSBEiJ_G0015530.1 mouse_genomes_project 1 66151172 66235247 - MGP_WSBEiJ_P0019688 Kansl1l protein_coding protein_coding MGP_WSBEiJ_T0019689.1 MGP_WSBEiJ_G0015530.1 mouse_genomes_project 1 66193432 66225764 - Kansl1l protein_coding processed_transcript MGP_WSBEiJ_T0019690.1 MGP_WSBEiJ_G0015530.1 mouse_genomes_project 1 66217704 66235231 - Kansl1l protein_coding retained_intron MGP_WSBEiJ_T0009410.1 MGP_WSBEiJ_G0007567.1 mouse_genomes_project 1 184782172 184782239 + Mir6904 miRNA miRNA MGP_WSBEiJ_T0022983.1 MGP_WSBEiJ_G0016226.1 mouse_genomes_project 1 177990508 177991462 + MGP_WSBEiJ_P0022983 Olfr430 protein_coding protein_coding MGP_WSBEiJ_T0019173.1 MGP_WSBEiJ_G0015435.1 mouse_genomes_project 1 52121651 52149654 - MGP_WSBEiJ_P0019173 Gm28551 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022973.1 MGP_WSBEiJ_G0016219.1 mouse_genomes_project 1 177590123 177945002 - protein_coding retained_intron MGP_WSBEiJ_T0020937.1 MGP_WSBEiJ_G0015780.1 mouse_genomes_project 1 106911671 106976407 + MGP_WSBEiJ_P0020937 Tnfrsf11a protein_coding protein_coding MGP_WSBEiJ_T0020938.1 MGP_WSBEiJ_G0015780.1 mouse_genomes_project 1 106911703 106946351 + Tnfrsf11a protein_coding retained_intron MGP_WSBEiJ_T0020939.1 MGP_WSBEiJ_G0015780.1 mouse_genomes_project 1 106951804 106958431 + Tnfrsf11a protein_coding retained_intron MGP_WSBEiJ_T0023313.1 MGP_WSBEiJ_G0016303.1 mouse_genomes_project 1 187083017 187085072 - MGP_WSBEiJ_P0023313 Ccdc185 protein_coding protein_coding MGP_WSBEiJ_T0000568.1 MGP_WSBEiJ_G0000513.1 mouse_genomes_project 1 124961846 124964718 - TEC TEC MGP_WSBEiJ_T0011774.1 MGP_WSBEiJ_G0009904.1 mouse_genomes_project 1 43356247 43356914 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022831.1 MGP_WSBEiJ_G0016178.1 mouse_genomes_project 1 175627594 175630117 + MGP_WSBEiJ_P0022831 Gm10521 protein_coding protein_coding MGP_WSBEiJ_T0011656.1 MGP_WSBEiJ_G0009786.1 mouse_genomes_project 1 3423112 3424065 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023624.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197859886 197886079 - MGP_WSBEiJ_P0023624 Traf3ip3 protein_coding protein_coding MGP_WSBEiJ_T0023625.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197859927 197886292 - MGP_WSBEiJ_P0023625 Traf3ip3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023626.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197859937 197886292 - MGP_WSBEiJ_P0023626 Traf3ip3 protein_coding protein_coding MGP_WSBEiJ_T0023627.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197862021 197886198 - MGP_WSBEiJ_P0023627 Traf3ip3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023628.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197863663 197869261 - MGP_WSBEiJ_P0023628 Traf3ip3 protein_coding protein_coding MGP_WSBEiJ_T0023629.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197863667 197882569 - Traf3ip3 protein_coding retained_intron MGP_WSBEiJ_T0023630.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197869016 197879021 - MGP_WSBEiJ_P0023630 Traf3ip3 protein_coding protein_coding MGP_WSBEiJ_T0023631.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197869105 197871581 - MGP_WSBEiJ_P0023631 Traf3ip3 protein_coding protein_coding MGP_WSBEiJ_T0023632.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197869632 197886200 - Traf3ip3 protein_coding retained_intron MGP_WSBEiJ_T0023633.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197878824 197886261 - Traf3ip3 protein_coding retained_intron MGP_WSBEiJ_T0023634.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197878965 197882718 - MGP_WSBEiJ_P0023634 Traf3ip3 protein_coding protein_coding MGP_WSBEiJ_T0023635.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197882774 197886243 - Traf3ip3 protein_coding processed_transcript MGP_WSBEiJ_T0023636.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197882781 197886247 - Traf3ip3 protein_coding processed_transcript MGP_WSBEiJ_T0023637.1 MGP_WSBEiJ_G0016366.1 mouse_genomes_project 1 197885640 197886448 - Traf3ip3 protein_coding processed_transcript MGP_WSBEiJ_T0011998.1 MGP_WSBEiJ_G0010128.1 mouse_genomes_project 1 129923769 129924249 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012136.1 MGP_WSBEiJ_G0010266.1 mouse_genomes_project 1 197568982 197569454 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005820.1 MGP_WSBEiJ_G0004879.1 mouse_genomes_project 1 136124261 136137862 + Gm1627 lincRNA lincRNA MGP_WSBEiJ_T0009350.1 MGP_WSBEiJ_G0007507.1 mouse_genomes_project 1 63725441 63725510 + Gm25748 miRNA miRNA MGP_WSBEiJ_T0000613.1 MGP_WSBEiJ_G0000557.1 mouse_genomes_project 1 138374802 138377055 + TEC TEC MGP_WSBEiJ_T0097586.1 MGP_WSBEiJ_G0036249.1 mouse_genomes_project 1 166815667 166815774 + Gm24940 snRNA snRNA MGP_WSBEiJ_T0018271.1 MGP_WSBEiJ_G0015251.1 mouse_genomes_project 1 7483134 7869765 - MGP_WSBEiJ_P0018271 Cpa6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018272.1 MGP_WSBEiJ_G0015251.1 mouse_genomes_project 1 7483141 7869765 - MGP_WSBEiJ_P0018272 Cpa6 protein_coding protein_coding MGP_WSBEiJ_T0018273.1 MGP_WSBEiJ_G0015251.1 mouse_genomes_project 1 7614663 7625913 - Cpa6 protein_coding retained_intron MGP_WSBEiJ_T0018274.1 MGP_WSBEiJ_G0015251.1 mouse_genomes_project 1 7743035 7869725 - Cpa6 protein_coding processed_transcript MGP_WSBEiJ_T0020440.1 MGP_WSBEiJ_G0015675.1 mouse_genomes_project 1 87523213 87526860 + MGP_WSBEiJ_P0020440 Chrng protein_coding protein_coding MGP_WSBEiJ_T0020441.1 MGP_WSBEiJ_G0015675.1 mouse_genomes_project 1 87524365 87526859 + MGP_WSBEiJ_P0020441 Chrng protein_coding protein_coding MGP_WSBEiJ_T0020442.1 MGP_WSBEiJ_G0015675.1 mouse_genomes_project 1 87524366 87531226 + MGP_WSBEiJ_P0020442 Chrng protein_coding protein_coding MGP_WSBEiJ_T0020443.1 MGP_WSBEiJ_G0015675.1 mouse_genomes_project 1 87524440 87526859 + MGP_WSBEiJ_P0020443 Chrng protein_coding protein_coding MGP_WSBEiJ_T0020444.1 MGP_WSBEiJ_G0015675.1 mouse_genomes_project 1 87524629 87527159 + Chrng protein_coding retained_intron MGP_WSBEiJ_T0098786.1 MGP_WSBEiJ_G0037449.1 mouse_genomes_project 1 119858216 119858347 - Gm26080 snoRNA snoRNA MGP_WSBEiJ_T0011688.1 MGP_WSBEiJ_G0009818.1 mouse_genomes_project 1 13001474 13001574 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005705.1 MGP_WSBEiJ_G0004783.1 mouse_genomes_project 1 73344245 73351675 + Gm29186 lincRNA lincRNA MGP_WSBEiJ_T0002915.1 MGP_WSBEiJ_G0002743.1 mouse_genomes_project 1 194388214 194391673 - Gm26574 antisense antisense MGP_WSBEiJ_T0011066.1 MGP_WSBEiJ_G0009223.1 mouse_genomes_project 1 189181999 189182274 - Gm23780 misc_RNA misc_RNA MGP_WSBEiJ_T0019595.1 MGP_WSBEiJ_G0015511.1 mouse_genomes_project 1 63940030 63950806 - MGP_WSBEiJ_P0019595 Mettl21a protein_coding protein_coding MGP_WSBEiJ_T0019596.1 MGP_WSBEiJ_G0015511.1 mouse_genomes_project 1 63940037 63950732 - MGP_WSBEiJ_P0019596 Mettl21a protein_coding protein_coding MGP_WSBEiJ_T0019597.1 MGP_WSBEiJ_G0015511.1 mouse_genomes_project 1 63941513 63949195 - Mettl21a protein_coding processed_transcript MGP_WSBEiJ_T0019598.1 MGP_WSBEiJ_G0015511.1 mouse_genomes_project 1 63947771 63950748 - Mettl21a protein_coding processed_transcript MGP_WSBEiJ_T0022678.1 MGP_WSBEiJ_G0016147.1 mouse_genomes_project 1 174694475 174701312 - Fcgr3 protein_coding retained_intron MGP_WSBEiJ_T0022679.1 MGP_WSBEiJ_G0016147.1 mouse_genomes_project 1 174694476 174704188 - MGP_WSBEiJ_P0022679 Fcgr3 protein_coding protein_coding MGP_WSBEiJ_T0022680.1 MGP_WSBEiJ_G0016147.1 mouse_genomes_project 1 174694504 174704188 - MGP_WSBEiJ_P0022680 Fcgr3 protein_coding protein_coding MGP_WSBEiJ_T0020633.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91973444 91996156 + MGP_WSBEiJ_P0020633 Scly protein_coding protein_coding MGP_WSBEiJ_T0020634.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91973466 91978618 + Scly protein_coding retained_intron MGP_WSBEiJ_T0020635.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91973474 91983821 + MGP_WSBEiJ_P0020635 Scly protein_coding protein_coding MGP_WSBEiJ_T0020636.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91973475 91984929 + MGP_WSBEiJ_P0020636 Scly protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020637.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91973476 91986408 + Scly protein_coding retained_intron MGP_WSBEiJ_T0020638.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91973510 91983787 + MGP_WSBEiJ_P0020638 Scly protein_coding protein_coding MGP_WSBEiJ_T0020639.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91973513 91983893 + MGP_WSBEiJ_P0020639 Scly protein_coding protein_coding MGP_WSBEiJ_T0020640.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91973533 91980543 + Scly protein_coding processed_transcript MGP_WSBEiJ_T0020641.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91975037 91977976 + MGP_WSBEiJ_P0020641 Scly protein_coding protein_coding MGP_WSBEiJ_T0020642.1 MGP_WSBEiJ_G0015713.1 mouse_genomes_project 1 91977903 91984950 + MGP_WSBEiJ_P0020642 Scly protein_coding protein_coding MGP_WSBEiJ_T0023612.1 MGP_WSBEiJ_G0016364.1 mouse_genomes_project 1 197837483 197856457 + MGP_WSBEiJ_P0023612 Irf6 protein_coding protein_coding MGP_WSBEiJ_T0023613.1 MGP_WSBEiJ_G0016364.1 mouse_genomes_project 1 197837526 197851302 + Irf6 protein_coding retained_intron MGP_WSBEiJ_T0023614.1 MGP_WSBEiJ_G0016364.1 mouse_genomes_project 1 197841111 197848616 + Irf6 protein_coding retained_intron MGP_WSBEiJ_T0023616.1 MGP_WSBEiJ_G0016364.1 mouse_genomes_project 1 197852935 197853922 + Irf6 protein_coding retained_intron MGP_WSBEiJ_T0097589.1 MGP_WSBEiJ_G0036252.1 mouse_genomes_project 1 174381317 174381424 - Gm23523 snRNA snRNA MGP_WSBEiJ_T0011885.1 MGP_WSBEiJ_G0010015.1 mouse_genomes_project 1 79953005 79953448 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022655.1 MGP_WSBEiJ_G0016141.1 mouse_genomes_project 1 174513697 174525710 - MGP_WSBEiJ_P0022655 Dusp12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022656.1 MGP_WSBEiJ_G0016141.1 mouse_genomes_project 1 174514379 174525793 - MGP_WSBEiJ_P0022656 Dusp12 protein_coding protein_coding MGP_WSBEiJ_T0022657.1 MGP_WSBEiJ_G0016141.1 mouse_genomes_project 1 174514379 174525452 - MGP_WSBEiJ_P0022657 Dusp12 protein_coding protein_coding MGP_WSBEiJ_T0022658.1 MGP_WSBEiJ_G0016141.1 mouse_genomes_project 1 174514379 174525648 - MGP_WSBEiJ_P0022658 Dusp12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022659.1 MGP_WSBEiJ_G0016141.1 mouse_genomes_project 1 174514380 174525660 - MGP_WSBEiJ_P0022659 Dusp12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022660.1 MGP_WSBEiJ_G0016141.1 mouse_genomes_project 1 174514711 174525649 - MGP_WSBEiJ_P0022660 Dusp12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022661.1 MGP_WSBEiJ_G0016141.1 mouse_genomes_project 1 174521252 174525257 - MGP_WSBEiJ_P0022661 Dusp12 protein_coding protein_coding MGP_WSBEiJ_T0021290.1 MGP_WSBEiJ_G0015861.1 mouse_genomes_project 1 133157233 133162827 + Eif2d protein_coding retained_intron MGP_WSBEiJ_T0021291.1 MGP_WSBEiJ_G0015861.1 mouse_genomes_project 1 133157233 133177760 + MGP_WSBEiJ_P0021291 Eif2d protein_coding protein_coding MGP_WSBEiJ_T0021292.1 MGP_WSBEiJ_G0015861.1 mouse_genomes_project 1 133157233 133178999 + MGP_WSBEiJ_P0021292 Eif2d protein_coding protein_coding MGP_WSBEiJ_T0021293.1 MGP_WSBEiJ_G0015861.1 mouse_genomes_project 1 133157233 133185087 + MGP_WSBEiJ_P0021293 Eif2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021294.1 MGP_WSBEiJ_G0015861.1 mouse_genomes_project 1 133157233 133185501 + MGP_WSBEiJ_P0021294 Eif2d protein_coding protein_coding MGP_WSBEiJ_T0021295.1 MGP_WSBEiJ_G0015861.1 mouse_genomes_project 1 133157233 133180373 + MGP_WSBEiJ_P0021295 Eif2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021296.1 MGP_WSBEiJ_G0015861.1 mouse_genomes_project 1 133157233 133192754 + MGP_WSBEiJ_P0021296 Eif2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021297.1 MGP_WSBEiJ_G0015861.1 mouse_genomes_project 1 133171899 133177031 + Eif2d protein_coding processed_transcript MGP_WSBEiJ_T0023532.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 195997453 196046517 - MGP_WSBEiJ_P0023532 protein_coding protein_coding MGP_WSBEiJ_T0023533.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 195999717 196045892 - MGP_WSBEiJ_P0023533 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023534.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 195999717 196045892 - MGP_WSBEiJ_P0023534 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023535.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 196001728 196003400 - protein_coding retained_intron MGP_WSBEiJ_T0023536.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 196003268 196035997 - protein_coding processed_transcript MGP_WSBEiJ_T0023537.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 196003894 196015648 - MGP_WSBEiJ_P0023537 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023538.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 196008654 196015637 - protein_coding retained_intron MGP_WSBEiJ_T0023539.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 196023077 196048774 - protein_coding processed_transcript MGP_WSBEiJ_T0023540.1 MGP_WSBEiJ_G0016350.1 mouse_genomes_project 1 196048134 196052549 - protein_coding retained_intron MGP_WSBEiJ_T0000441.1 MGP_WSBEiJ_G0000386.1 mouse_genomes_project 1 52647440 52648893 + TEC TEC MGP_WSBEiJ_T0021935.1 MGP_WSBEiJ_G0015993.1 mouse_genomes_project 1 154671107 154735450 + MGP_WSBEiJ_P0021935 Edem3 protein_coding protein_coding MGP_WSBEiJ_T0021936.1 MGP_WSBEiJ_G0015993.1 mouse_genomes_project 1 154671110 154738566 + MGP_WSBEiJ_P0021936 Edem3 protein_coding protein_coding MGP_WSBEiJ_T0021937.1 MGP_WSBEiJ_G0015993.1 mouse_genomes_project 1 154671196 154735494 + MGP_WSBEiJ_P0021937 Edem3 protein_coding protein_coding MGP_WSBEiJ_T0021938.1 MGP_WSBEiJ_G0015993.1 mouse_genomes_project 1 154671196 154735494 + MGP_WSBEiJ_P0021938 Edem3 protein_coding protein_coding MGP_WSBEiJ_T0011836.1 MGP_WSBEiJ_G0009966.1 mouse_genomes_project 1 59982057 59983400 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018438.1 MGP_WSBEiJ_G0015291.1 mouse_genomes_project 1 18589616 18603545 + MGP_WSBEiJ_P0018438 Tmem14a protein_coding protein_coding MGP_WSBEiJ_T0000676.1 MGP_WSBEiJ_G0000619.1 mouse_genomes_project 1 162891974 162894211 + TEC TEC MGP_WSBEiJ_T0100422.1 MGP_WSBEiJ_G0038881.1 mouse_genomes_project 1 136713128 136718517 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011057.1 MGP_WSBEiJ_G0009214.1 mouse_genomes_project 1 74642294 74642387 + Gm27507 misc_RNA misc_RNA MGP_WSBEiJ_T0002833.1 MGP_WSBEiJ_G0002676.1 mouse_genomes_project 1 138537818 138546805 + Gm26568 antisense antisense MGP_WSBEiJ_T0019261.1 MGP_WSBEiJ_G0015454.1 mouse_genomes_project 1 56337387 56359223 + MGP_WSBEiJ_P0019261 1700066M21Rik protein_coding protein_coding MGP_WSBEiJ_T0019262.1 MGP_WSBEiJ_G0015454.1 mouse_genomes_project 1 56337400 56339930 + 1700066M21Rik protein_coding processed_transcript MGP_WSBEiJ_T0019263.1 MGP_WSBEiJ_G0015454.1 mouse_genomes_project 1 56337407 56339846 + 1700066M21Rik protein_coding processed_transcript MGP_WSBEiJ_T0005606.1 MGP_WSBEiJ_G0004716.1 mouse_genomes_project 1 37266608 37275825 - Gm37821 lincRNA lincRNA MGP_WSBEiJ_T0018796.1 MGP_WSBEiJ_G0015358.1 mouse_genomes_project 1 36049139 36057427 + MGP_WSBEiJ_P0018796 Mrpl30 protein_coding protein_coding MGP_WSBEiJ_T0018797.1 MGP_WSBEiJ_G0015358.1 mouse_genomes_project 1 36049194 36057256 + MGP_WSBEiJ_P0018797 Mrpl30 protein_coding protein_coding MGP_WSBEiJ_T0018798.1 MGP_WSBEiJ_G0015358.1 mouse_genomes_project 1 36049195 36051910 + Mrpl30 protein_coding retained_intron MGP_WSBEiJ_T0018799.1 MGP_WSBEiJ_G0015358.1 mouse_genomes_project 1 36049205 36052647 + MGP_WSBEiJ_P0018799 Mrpl30 protein_coding protein_coding MGP_WSBEiJ_T0018800.1 MGP_WSBEiJ_G0015358.1 mouse_genomes_project 1 36051596 36057057 + MGP_WSBEiJ_P0018800 Mrpl30 protein_coding protein_coding MGP_WSBEiJ_T0018801.1 MGP_WSBEiJ_G0015358.1 mouse_genomes_project 1 36052598 36057230 + MGP_WSBEiJ_P0018801 Mrpl30 protein_coding protein_coding MGP_WSBEiJ_T0018802.1 MGP_WSBEiJ_G0015358.1 mouse_genomes_project 1 36056147 36057017 + Mrpl30 protein_coding retained_intron MGP_WSBEiJ_T0012018.1 MGP_WSBEiJ_G0010148.1 mouse_genomes_project 1 141414943 141415580 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018961.1 MGP_WSBEiJ_G0015396.1 mouse_genomes_project 1 42278550 42360568 - MGP_WSBEiJ_P0018961 Uxs1 protein_coding protein_coding MGP_WSBEiJ_T0018962.1 MGP_WSBEiJ_G0015396.1 mouse_genomes_project 1 42281093 42360509 - MGP_WSBEiJ_P0018962 Uxs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018963.1 MGP_WSBEiJ_G0015396.1 mouse_genomes_project 1 42296587 42360568 - MGP_WSBEiJ_P0018963 Uxs1 protein_coding protein_coding MGP_WSBEiJ_T0018964.1 MGP_WSBEiJ_G0015396.1 mouse_genomes_project 1 42303310 42359789 - Uxs1 protein_coding processed_transcript MGP_WSBEiJ_T0018965.1 MGP_WSBEiJ_G0015396.1 mouse_genomes_project 1 42303310 42360518 - MGP_WSBEiJ_P0018965 Uxs1 protein_coding protein_coding MGP_WSBEiJ_T0018966.1 MGP_WSBEiJ_G0015396.1 mouse_genomes_project 1 42306431 42360530 - Uxs1 protein_coding processed_transcript MGP_WSBEiJ_T0018967.1 MGP_WSBEiJ_G0015396.1 mouse_genomes_project 1 42310519 42360530 - MGP_WSBEiJ_P0018967 Uxs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018968.1 MGP_WSBEiJ_G0015396.1 mouse_genomes_project 1 42321932 42360542 - MGP_WSBEiJ_P0018968 Uxs1 protein_coding protein_coding MGP_WSBEiJ_T0098754.1 MGP_WSBEiJ_G0037417.1 mouse_genomes_project 1 57145648 57145758 - Gm24548 snoRNA snoRNA MGP_WSBEiJ_T0011966.1 MGP_WSBEiJ_G0010096.1 mouse_genomes_project 1 116567594 116568168 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005938.1 MGP_WSBEiJ_G0004970.1 mouse_genomes_project 1 188675138 188682097 - Gm37712 lincRNA lincRNA MGP_WSBEiJ_T0021701.1 MGP_WSBEiJ_G0015949.1 mouse_genomes_project 1 138502499 138528875 - MGP_WSBEiJ_P0021701 Mroh3 protein_coding protein_coding MGP_WSBEiJ_T0021702.1 MGP_WSBEiJ_G0015949.1 mouse_genomes_project 1 138502677 138534592 - MGP_WSBEiJ_P0021702 Mroh3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021703.1 MGP_WSBEiJ_G0015949.1 mouse_genomes_project 1 138502677 138511967 - MGP_WSBEiJ_P0021703 Mroh3 protein_coding protein_coding MGP_WSBEiJ_T0021704.1 MGP_WSBEiJ_G0015949.1 mouse_genomes_project 1 138502687 138504171 - Mroh3 protein_coding retained_intron MGP_WSBEiJ_T0021705.1 MGP_WSBEiJ_G0015949.1 mouse_genomes_project 1 138512039 138520769 - MGP_WSBEiJ_P0021705 Mroh3 protein_coding protein_coding MGP_WSBEiJ_T0019950.1 MGP_WSBEiJ_G0015585.1 mouse_genomes_project 1 74956629 74964982 - MGP_WSBEiJ_P0019950 Slc23a3 protein_coding protein_coding MGP_WSBEiJ_T0019951.1 MGP_WSBEiJ_G0015585.1 mouse_genomes_project 1 74962804 74964638 - Slc23a3 protein_coding retained_intron MGP_WSBEiJ_T0018263.1 MGP_WSBEiJ_G0015250.1 mouse_genomes_project 1 7290181 7390010 - MGP_WSBEiJ_P0018263 Arfgef1 protein_coding protein_coding MGP_WSBEiJ_T0018264.1 MGP_WSBEiJ_G0015250.1 mouse_genomes_project 1 7291300 7294312 - Arfgef1 protein_coding retained_intron MGP_WSBEiJ_T0018265.1 MGP_WSBEiJ_G0015250.1 mouse_genomes_project 1 7300013 7307139 - Arfgef1 protein_coding retained_intron MGP_WSBEiJ_T0018266.1 MGP_WSBEiJ_G0015250.1 mouse_genomes_project 1 7309007 7312669 - Arfgef1 protein_coding retained_intron MGP_WSBEiJ_T0018267.1 MGP_WSBEiJ_G0015250.1 mouse_genomes_project 1 7313365 7313915 - Arfgef1 protein_coding retained_intron MGP_WSBEiJ_T0018268.1 MGP_WSBEiJ_G0015250.1 mouse_genomes_project 1 7325683 7390010 - MGP_WSBEiJ_P0018268 Arfgef1 protein_coding protein_coding MGP_WSBEiJ_T0018269.1 MGP_WSBEiJ_G0015250.1 mouse_genomes_project 1 7365856 7367018 - Arfgef1 protein_coding retained_intron MGP_WSBEiJ_T0018270.1 MGP_WSBEiJ_G0015250.1 mouse_genomes_project 1 7366071 7371143 - Arfgef1 protein_coding retained_intron MGP_WSBEiJ_T0000489.1 MGP_WSBEiJ_G0000434.1 mouse_genomes_project 1 74147945 74150809 + TEC TEC MGP_WSBEiJ_T0000422.1 MGP_WSBEiJ_G0000367.1 mouse_genomes_project 1 35620411 35623165 - TEC TEC MGP_WSBEiJ_T0021244.1 MGP_WSBEiJ_G0015846.1 mouse_genomes_project 1 132536738 132586492 - MGP_WSBEiJ_P0021244 Zp3r protein_coding protein_coding MGP_WSBEiJ_T0021245.1 MGP_WSBEiJ_G0015846.1 mouse_genomes_project 1 132536738 132586492 - MGP_WSBEiJ_P0021245 Zp3r protein_coding protein_coding MGP_WSBEiJ_T0021246.1 MGP_WSBEiJ_G0015846.1 mouse_genomes_project 1 132536741 132586483 - MGP_WSBEiJ_P0021246 Zp3r protein_coding protein_coding MGP_WSBEiJ_T0021461.1 MGP_WSBEiJ_G0015896.1 mouse_genomes_project 1 135447659 135460656 + MGP_WSBEiJ_P0021461 Ren1 protein_coding protein_coding MGP_WSBEiJ_T0021462.1 MGP_WSBEiJ_G0015896.1 mouse_genomes_project 1 135457510 135469030 + MGP_WSBEiJ_P0021462 Ren1 protein_coding protein_coding MGP_WSBEiJ_T0011661.1 MGP_WSBEiJ_G0009791.1 mouse_genomes_project 1 4056412 4056571 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018681.1 MGP_WSBEiJ_G0015339.1 mouse_genomes_project 1 34574989 34592653 + MGP_WSBEiJ_P0018681 Cnnm3 protein_coding protein_coding MGP_WSBEiJ_T0018682.1 MGP_WSBEiJ_G0015339.1 mouse_genomes_project 1 34574989 34592653 + MGP_WSBEiJ_P0018682 Cnnm3 protein_coding protein_coding MGP_WSBEiJ_T0018683.1 MGP_WSBEiJ_G0015339.1 mouse_genomes_project 1 34576219 34584864 + Cnnm3 protein_coding retained_intron MGP_WSBEiJ_T0018684.1 MGP_WSBEiJ_G0015339.1 mouse_genomes_project 1 34582997 34584003 + Cnnm3 protein_coding retained_intron MGP_WSBEiJ_T0018685.1 MGP_WSBEiJ_G0015339.1 mouse_genomes_project 1 34585189 34590023 + Cnnm3 protein_coding retained_intron MGP_WSBEiJ_T0002849.1 MGP_WSBEiJ_G0002689.1 mouse_genomes_project 1 158935728 158976465 + Gm37571 antisense antisense MGP_WSBEiJ_T0098738.1 MGP_WSBEiJ_G0037401.1 mouse_genomes_project 1 18269594 18269725 - Gm24171 snoRNA snoRNA MGP_WSBEiJ_T0021104.1 MGP_WSBEiJ_G0015818.1 mouse_genomes_project 1 121823544 121826136 + MGP_WSBEiJ_P0021104 C1ql2 protein_coding protein_coding MGP_WSBEiJ_T0005782.1 MGP_WSBEiJ_G0004848.1 mouse_genomes_project 1 114637642 114638554 + Gm28189 lincRNA lincRNA MGP_WSBEiJ_T0000524.1 MGP_WSBEiJ_G0000469.1 mouse_genomes_project 1 87181756 87183286 + TEC TEC MGP_WSBEiJ_T0005948.1 MGP_WSBEiJ_G0004978.1 mouse_genomes_project 1 189701521 189707081 - 4930532G15Rik lincRNA lincRNA MGP_WSBEiJ_T0000509.1 MGP_WSBEiJ_G0000454.1 mouse_genomes_project 1 83198917 83200010 - TEC TEC MGP_WSBEiJ_T0098790.1 MGP_WSBEiJ_G0037453.1 mouse_genomes_project 1 130322679 130322813 + Gm23902 snoRNA snoRNA MGP_WSBEiJ_T0012069.1 MGP_WSBEiJ_G0010199.1 mouse_genomes_project 1 162720570 162720780 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019431.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58815806 58823477 + Nop58 protein_coding processed_transcript MGP_WSBEiJ_T0019432.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58815812 58842316 + MGP_WSBEiJ_P0019432 Nop58 protein_coding protein_coding MGP_WSBEiJ_T0019433.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58815820 58826885 + MGP_WSBEiJ_P0019433 Nop58 protein_coding protein_coding MGP_WSBEiJ_T0019434.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58815838 58823498 + Nop58 protein_coding retained_intron MGP_WSBEiJ_T0019435.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58815841 58821800 + Nop58 protein_coding retained_intron MGP_WSBEiJ_T0019436.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58815844 58850249 + MGP_WSBEiJ_P0019436 Nop58 protein_coding protein_coding MGP_WSBEiJ_T0019437.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58815856 58826860 + MGP_WSBEiJ_P0019437 Nop58 protein_coding protein_coding MGP_WSBEiJ_T0019438.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58815889 58829229 + MGP_WSBEiJ_P0019438 Nop58 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019439.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58820987 58829193 + Nop58 protein_coding retained_intron MGP_WSBEiJ_T0019440.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58823254 58835017 + Nop58 protein_coding retained_intron MGP_WSBEiJ_T0019441.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58826834 58834969 + MGP_WSBEiJ_P0019441 Nop58 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019442.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58829222 58837869 + MGP_WSBEiJ_P0019442 Nop58 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019443.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58834966 58839904 + MGP_WSBEiJ_P0019443 Nop58 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019444.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58835005 58842085 + MGP_WSBEiJ_P0019444 Nop58 protein_coding protein_coding MGP_WSBEiJ_T0019445.1 MGP_WSBEiJ_G0015484.1 mouse_genomes_project 1 58835516 58842086 + MGP_WSBEiJ_P0019445 Nop58 protein_coding protein_coding MGP_WSBEiJ_T0002752.1 MGP_WSBEiJ_G0002616.1 mouse_genomes_project 1 61393992 61398907 - Pard3bos2 antisense antisense MGP_WSBEiJ_T0018460.1 MGP_WSBEiJ_G0015296.1 mouse_genomes_project 1 20552716 20554497 - MGP_WSBEiJ_P0018460 4933415F23Rik protein_coding protein_coding MGP_WSBEiJ_T0018143.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3243235 3272339 + MGP_WSBEiJ_P0018143 Rb1cc1 protein_coding protein_coding MGP_WSBEiJ_T0018144.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3243265 3277235 + MGP_WSBEiJ_P0018144 Rb1cc1 protein_coding protein_coding MGP_WSBEiJ_T0018145.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3251624 3315138 + MGP_WSBEiJ_P0018145 Rb1cc1 protein_coding protein_coding MGP_WSBEiJ_T0018146.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3251698 3268797 + Rb1cc1 protein_coding retained_intron MGP_WSBEiJ_T0018147.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3252043 3272038 + MGP_WSBEiJ_P0018147 Rb1cc1 protein_coding protein_coding MGP_WSBEiJ_T0018148.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3266097 3288914 + MGP_WSBEiJ_P0018148 Rb1cc1 protein_coding protein_coding MGP_WSBEiJ_T0018149.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3279833 3288243 + Rb1cc1 protein_coding retained_intron MGP_WSBEiJ_T0018150.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3288972 3313228 + MGP_WSBEiJ_P0018150 Rb1cc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018151.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3289861 3291144 + Rb1cc1 protein_coding processed_transcript MGP_WSBEiJ_T0018152.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3289979 3305211 + Rb1cc1 protein_coding retained_intron MGP_WSBEiJ_T0018153.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3300197 3302249 + Rb1cc1 protein_coding retained_intron MGP_WSBEiJ_T0018154.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3302297 3304298 + Rb1cc1 protein_coding retained_intron MGP_WSBEiJ_T0018155.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3302327 3313227 + MGP_WSBEiJ_P0018155 Rb1cc1 protein_coding protein_coding MGP_WSBEiJ_T0018156.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3305006 3312161 + Rb1cc1 protein_coding retained_intron MGP_WSBEiJ_T0018157.1 MGP_WSBEiJ_G0015234.1 mouse_genomes_project 1 3310073 3314334 + Rb1cc1 protein_coding retained_intron MGP_WSBEiJ_T0098789.1 MGP_WSBEiJ_G0037452.1 mouse_genomes_project 1 129151624 129151733 + Gm23734 snoRNA snoRNA MGP_WSBEiJ_T0002727.1 MGP_WSBEiJ_G0002597.1 mouse_genomes_project 1 38995877 39002077 - Gm37623 antisense antisense MGP_WSBEiJ_T0020643.1 MGP_WSBEiJ_G0015714.1 mouse_genomes_project 1 91997159 92023294 + MGP_WSBEiJ_P0020643 Espnl protein_coding protein_coding MGP_WSBEiJ_T0020644.1 MGP_WSBEiJ_G0015714.1 mouse_genomes_project 1 91997217 92020925 + MGP_WSBEiJ_P0020644 Espnl protein_coding protein_coding MGP_WSBEiJ_T0016431.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137350857 137351795 - Ptprv processed_transcript retained_intron MGP_WSBEiJ_T0016432.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137350858 137378475 - Ptprv processed_transcript processed_transcript MGP_WSBEiJ_T0016433.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137350860 137351667 - Ptprv processed_transcript processed_transcript MGP_WSBEiJ_T0016434.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137350987 137351948 - Ptprv processed_transcript processed_transcript MGP_WSBEiJ_T0016435.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137352371 137352820 - Ptprv processed_transcript retained_intron MGP_WSBEiJ_T0016436.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137352630 137353896 - Ptprv processed_transcript retained_intron MGP_WSBEiJ_T0016437.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137353524 137354450 - Ptprv processed_transcript processed_transcript MGP_WSBEiJ_T0016438.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137372307 137378449 - Ptprv processed_transcript processed_transcript MGP_WSBEiJ_T0016439.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137372325 137374252 - Ptprv processed_transcript retained_intron MGP_WSBEiJ_T0016440.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137375441 137377045 - Ptprv processed_transcript processed_transcript MGP_WSBEiJ_T0016441.1 MGP_WSBEiJ_G0014529.1 mouse_genomes_project 1 137375552 137378424 - Ptprv processed_transcript processed_transcript MGP_WSBEiJ_T0020596.1 MGP_WSBEiJ_G0015707.1 mouse_genomes_project 1 91619524 91620444 + MGP_WSBEiJ_P0020596 Prlh protein_coding protein_coding MGP_WSBEiJ_T0097606.1 MGP_WSBEiJ_G0036269.1 mouse_genomes_project 1 196460072 196460185 - Gm26203 snRNA snRNA MGP_WSBEiJ_T0021356.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134043854 134090298 - MGP_WSBEiJ_P0021356 Mfsd4a protein_coding protein_coding MGP_WSBEiJ_T0021357.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134044297 134050097 - Mfsd4a protein_coding retained_intron MGP_WSBEiJ_T0021358.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134047684 134090352 - MGP_WSBEiJ_P0021358 Mfsd4a protein_coding protein_coding MGP_WSBEiJ_T0021359.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134047871 134090213 - MGP_WSBEiJ_P0021359 Mfsd4a protein_coding protein_coding MGP_WSBEiJ_T0021360.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134047871 134090350 - MGP_WSBEiJ_P0021360 Mfsd4a protein_coding protein_coding MGP_WSBEiJ_T0021361.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134047898 134090449 - MGP_WSBEiJ_P0021361 Mfsd4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021362.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134057806 134090279 - MGP_WSBEiJ_P0021362 Mfsd4a protein_coding protein_coding MGP_WSBEiJ_T0021363.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134057815 134090320 - MGP_WSBEiJ_P0021363 Mfsd4a protein_coding protein_coding MGP_WSBEiJ_T0021364.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134059848 134062945 - Mfsd4a protein_coding processed_transcript MGP_WSBEiJ_T0021365.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134059952 134090287 - MGP_WSBEiJ_P0021365 Mfsd4a protein_coding protein_coding MGP_WSBEiJ_T0021366.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134061687 134067613 - Mfsd4a protein_coding retained_intron MGP_WSBEiJ_T0021367.1 MGP_WSBEiJ_G0015876.1 mouse_genomes_project 1 134067489 134075184 - MGP_WSBEiJ_P0021367 Mfsd4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005634.1 MGP_WSBEiJ_G0004730.1 mouse_genomes_project 1 45454077 45455025 - Gm28151 lincRNA lincRNA MGP_WSBEiJ_T0100426.1 MGP_WSBEiJ_G0038885.1 mouse_genomes_project 1 176833745 176834604 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012132.1 MGP_WSBEiJ_G0010262.1 mouse_genomes_project 1 196134468 196134933 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002712.1 MGP_WSBEiJ_G0002585.1 mouse_genomes_project 1 35248153 35249145 - Gm37020 antisense antisense MGP_WSBEiJ_T0019627.1 MGP_WSBEiJ_G0015522.1 mouse_genomes_project 1 64460214 64482361 - MGP_WSBEiJ_P0019627 D630023F18Rik protein_coding protein_coding MGP_WSBEiJ_T0019628.1 MGP_WSBEiJ_G0015522.1 mouse_genomes_project 1 64462250 64482340 - MGP_WSBEiJ_P0019628 D630023F18Rik protein_coding protein_coding MGP_WSBEiJ_T0019629.1 MGP_WSBEiJ_G0015522.1 mouse_genomes_project 1 64463655 64482261 - MGP_WSBEiJ_P0019629 D630023F18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021087.1 MGP_WSBEiJ_G0015814.1 mouse_genomes_project 1 121531101 121539322 - MGP_WSBEiJ_P0021087 Tmem37 protein_coding protein_coding MGP_WSBEiJ_T0011643.1 MGP_WSBEiJ_G0009773.1 mouse_genomes_project 1 275666 276146 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005580.1 MGP_WSBEiJ_G0004693.1 mouse_genomes_project 1 20749000 20749399 + Gm27028 lincRNA lincRNA MGP_WSBEiJ_T0096889.1 MGP_WSBEiJ_G0035570.1 mouse_genomes_project 1 152661533 152661665 + n-R5s219 rRNA rRNA MGP_WSBEiJ_T0011063.1 MGP_WSBEiJ_G0009220.1 mouse_genomes_project 1 168985459 168985710 - Gm23599 misc_RNA misc_RNA MGP_WSBEiJ_T0018191.1 MGP_WSBEiJ_G0015240.1 mouse_genomes_project 1 6659613 6691760 + MGP_WSBEiJ_P0018191 Adhfe1 protein_coding protein_coding MGP_WSBEiJ_T0018192.1 MGP_WSBEiJ_G0015240.1 mouse_genomes_project 1 6659720 6690691 + MGP_WSBEiJ_P0018192 Adhfe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018193.1 MGP_WSBEiJ_G0015240.1 mouse_genomes_project 1 6659757 6665353 + MGP_WSBEiJ_P0018193 Adhfe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018194.1 MGP_WSBEiJ_G0015240.1 mouse_genomes_project 1 6659772 6667234 + MGP_WSBEiJ_P0018194 Adhfe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018195.1 MGP_WSBEiJ_G0015240.1 mouse_genomes_project 1 6659784 6694466 + MGP_WSBEiJ_P0018195 Adhfe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000672.1 MGP_WSBEiJ_G0000615.1 mouse_genomes_project 1 161768480 161771643 + TEC TEC MGP_WSBEiJ_T0011056.1 MGP_WSBEiJ_G0009213.1 mouse_genomes_project 1 73202396 73202550 + Gm27315 misc_RNA misc_RNA MGP_WSBEiJ_T0009388.1 MGP_WSBEiJ_G0007545.1 mouse_genomes_project 1 140377606 140377693 + Mir181a-1 miRNA miRNA MGP_WSBEiJ_T0011849.1 MGP_WSBEiJ_G0009979.1 mouse_genomes_project 1 62660252 62660869 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000630.1 MGP_WSBEiJ_G0000573.1 mouse_genomes_project 1 141506133 141508591 + TEC TEC MGP_WSBEiJ_T0021100.1 MGP_WSBEiJ_G0015817.1 mouse_genomes_project 1 121662079 121738114 - MGP_WSBEiJ_P0021100 Steap3 protein_coding protein_coding MGP_WSBEiJ_T0021101.1 MGP_WSBEiJ_G0015817.1 mouse_genomes_project 1 121697529 121743923 - MGP_WSBEiJ_P0021101 Steap3 protein_coding protein_coding MGP_WSBEiJ_T0021102.1 MGP_WSBEiJ_G0015817.1 mouse_genomes_project 1 121699773 121743272 - MGP_WSBEiJ_P0021102 Steap3 protein_coding protein_coding MGP_WSBEiJ_T0021103.1 MGP_WSBEiJ_G0015817.1 mouse_genomes_project 1 121700788 121743079 - MGP_WSBEiJ_P0021103 Steap3 protein_coding protein_coding MGP_WSBEiJ_T0022815.1 MGP_WSBEiJ_G0016173.1 mouse_genomes_project 1 175327460 175346427 - MGP_WSBEiJ_P0022815 Ly9 protein_coding protein_coding MGP_WSBEiJ_T0022816.1 MGP_WSBEiJ_G0016173.1 mouse_genomes_project 1 175327469 175346375 - MGP_WSBEiJ_P0022816 Ly9 protein_coding protein_coding MGP_WSBEiJ_T0022817.1 MGP_WSBEiJ_G0016173.1 mouse_genomes_project 1 175327485 175346351 - MGP_WSBEiJ_P0022817 Ly9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022818.1 MGP_WSBEiJ_G0016173.1 mouse_genomes_project 1 175329484 175346346 - MGP_WSBEiJ_P0022818 Ly9 protein_coding protein_coding MGP_WSBEiJ_T0022819.1 MGP_WSBEiJ_G0016173.1 mouse_genomes_project 1 175338563 175346377 - Ly9 protein_coding retained_intron MGP_WSBEiJ_T0011936.1 MGP_WSBEiJ_G0010066.1 mouse_genomes_project 1 106432530 106432856 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019055.1 MGP_WSBEiJ_G0015414.1 mouse_genomes_project 1 45419690 45458170 - MGP_WSBEiJ_P0019055 protein_coding unknown_likely_coding MGP_WSBEiJ_T0019056.1 MGP_WSBEiJ_G0015414.1 mouse_genomes_project 1 45420170 45438494 - protein_coding retained_intron MGP_WSBEiJ_T0019057.1 MGP_WSBEiJ_G0015414.1 mouse_genomes_project 1 45438234 45500114 - MGP_WSBEiJ_P0019057 protein_coding protein_coding MGP_WSBEiJ_T0019058.1 MGP_WSBEiJ_G0015414.1 mouse_genomes_project 1 45438332 45495327 - MGP_WSBEiJ_P0019058 protein_coding protein_coding MGP_WSBEiJ_T0011865.1 MGP_WSBEiJ_G0009995.1 mouse_genomes_project 1 67066264 67068248 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021342.1 MGP_WSBEiJ_G0015873.1 mouse_genomes_project 1 133924555 133946561 + MGP_WSBEiJ_P0021342 Nucks1 protein_coding protein_coding MGP_WSBEiJ_T0021343.1 MGP_WSBEiJ_G0015873.1 mouse_genomes_project 1 133924577 133950203 + MGP_WSBEiJ_P0021343 Nucks1 protein_coding protein_coding MGP_WSBEiJ_T0021344.1 MGP_WSBEiJ_G0015873.1 mouse_genomes_project 1 133943044 133943953 + Nucks1 protein_coding retained_intron MGP_WSBEiJ_T0011990.1 MGP_WSBEiJ_G0010120.1 mouse_genomes_project 1 124784179 124784296 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019414.1 MGP_WSBEiJ_G0015480.1 mouse_genomes_project 1 58365885 58466125 + MGP_WSBEiJ_P0019414 Cdk15 protein_coding protein_coding MGP_WSBEiJ_T0019415.1 MGP_WSBEiJ_G0015480.1 mouse_genomes_project 1 58365886 58465521 + MGP_WSBEiJ_P0019415 Cdk15 protein_coding protein_coding MGP_WSBEiJ_T0019416.1 MGP_WSBEiJ_G0015480.1 mouse_genomes_project 1 58366107 58366871 + Cdk15 protein_coding processed_transcript MGP_WSBEiJ_T0019417.1 MGP_WSBEiJ_G0015480.1 mouse_genomes_project 1 58409581 58465600 + Cdk15 protein_coding processed_transcript MGP_WSBEiJ_T0018464.1 MGP_WSBEiJ_G0015298.1 mouse_genomes_project 1 21218091 21269825 + MGP_WSBEiJ_P0018464 B3gat2 protein_coding protein_coding MGP_WSBEiJ_T0018465.1 MGP_WSBEiJ_G0015298.1 mouse_genomes_project 1 21218715 21302066 + MGP_WSBEiJ_P0018465 B3gat2 protein_coding protein_coding MGP_WSBEiJ_T0005698.1 MGP_WSBEiJ_G0004779.1 mouse_genomes_project 1 73088002 73119174 + Gm29185 lincRNA lincRNA MGP_WSBEiJ_T0021588.1 MGP_WSBEiJ_G0015926.1 mouse_genomes_project 1 137194741 137207521 + MGP_WSBEiJ_P0021588 Ube2t protein_coding protein_coding MGP_WSBEiJ_T0021589.1 MGP_WSBEiJ_G0015926.1 mouse_genomes_project 1 137194767 137198190 + Ube2t protein_coding retained_intron MGP_WSBEiJ_T0021590.1 MGP_WSBEiJ_G0015926.1 mouse_genomes_project 1 137203636 137207518 + MGP_WSBEiJ_P0021590 Ube2t protein_coding protein_coding MGP_WSBEiJ_T0021591.1 MGP_WSBEiJ_G0015926.1 mouse_genomes_project 1 137205312 137206214 + Ube2t protein_coding retained_intron MGP_WSBEiJ_T0018909.1 MGP_WSBEiJ_G0015382.1 mouse_genomes_project 1 38762292 38788164 + MGP_WSBEiJ_P0018909 Il18r1 protein_coding protein_coding MGP_WSBEiJ_T0018910.1 MGP_WSBEiJ_G0015382.1 mouse_genomes_project 1 38762416 38788166 + MGP_WSBEiJ_P0018910 Il18r1 protein_coding protein_coding MGP_WSBEiJ_T0018911.1 MGP_WSBEiJ_G0015382.1 mouse_genomes_project 1 38762746 38797442 + MGP_WSBEiJ_P0018911 Il18r1 protein_coding protein_coding MGP_WSBEiJ_T0018912.1 MGP_WSBEiJ_G0015382.1 mouse_genomes_project 1 38762746 38797443 + MGP_WSBEiJ_P0018912 Il18r1 protein_coding protein_coding MGP_WSBEiJ_T0018913.1 MGP_WSBEiJ_G0015382.1 mouse_genomes_project 1 38762746 38797422 + MGP_WSBEiJ_P0018913 Il18r1 protein_coding protein_coding MGP_WSBEiJ_T0018914.1 MGP_WSBEiJ_G0015382.1 mouse_genomes_project 1 38768450 38792501 + MGP_WSBEiJ_P0018914 Il18r1 protein_coding protein_coding MGP_WSBEiJ_T0098791.1 MGP_WSBEiJ_G0037454.1 mouse_genomes_project 1 134879281 134879402 - Gm22609 snoRNA snoRNA MGP_WSBEiJ_T0005777.1 MGP_WSBEiJ_G0004845.1 mouse_genomes_project 1 108927309 108935780 + Gm15389 lincRNA lincRNA MGP_WSBEiJ_T0022555.1 MGP_WSBEiJ_G0016111.1 mouse_genomes_project 1 169756293 169816292 + MGP_WSBEiJ_P0022555 Ildr2 protein_coding protein_coding MGP_WSBEiJ_T0022556.1 MGP_WSBEiJ_G0016111.1 mouse_genomes_project 1 169756347 169810726 + MGP_WSBEiJ_P0022556 Ildr2 protein_coding protein_coding MGP_WSBEiJ_T0022557.1 MGP_WSBEiJ_G0016111.1 mouse_genomes_project 1 169756347 169810726 + MGP_WSBEiJ_P0022557 Ildr2 protein_coding protein_coding MGP_WSBEiJ_T0022558.1 MGP_WSBEiJ_G0016111.1 mouse_genomes_project 1 169756347 169810726 + MGP_WSBEiJ_P0022558 Ildr2 protein_coding protein_coding MGP_WSBEiJ_T0022559.1 MGP_WSBEiJ_G0016111.1 mouse_genomes_project 1 169756347 169810726 + MGP_WSBEiJ_P0022559 Ildr2 protein_coding protein_coding MGP_WSBEiJ_T0022560.1 MGP_WSBEiJ_G0016111.1 mouse_genomes_project 1 169756347 169810726 + MGP_WSBEiJ_P0022560 Ildr2 protein_coding protein_coding MGP_WSBEiJ_T0022561.1 MGP_WSBEiJ_G0016111.1 mouse_genomes_project 1 169756347 169810726 + MGP_WSBEiJ_P0022561 Ildr2 protein_coding protein_coding MGP_WSBEiJ_T0097239.1 MGP_WSBEiJ_G0035920.1 mouse_genomes_project 1 69191489 69194973 - Gm29112 sense_intronic sense_intronic MGP_WSBEiJ_T0098760.1 MGP_WSBEiJ_G0037423.1 mouse_genomes_project 1 62311107 62311221 + Gm24942 snoRNA snoRNA MGP_WSBEiJ_T0012022.1 MGP_WSBEiJ_G0010152.1 mouse_genomes_project 1 142489645 142500481 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012071.1 MGP_WSBEiJ_G0010201.1 mouse_genomes_project 1 164668597 164669794 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011651.1 MGP_WSBEiJ_G0009781.1 mouse_genomes_project 1 1992958 1993230 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005724.1 MGP_WSBEiJ_G0004798.1 mouse_genomes_project 1 80436638 80469550 + 1700016L21Rik lincRNA lincRNA MGP_WSBEiJ_T0005725.1 MGP_WSBEiJ_G0004798.1 mouse_genomes_project 1 80436646 80473757 + 1700016L21Rik lincRNA lincRNA MGP_WSBEiJ_T0011652.1 MGP_WSBEiJ_G0009782.1 mouse_genomes_project 1 2133030 2134618 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019399.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58223989 58262287 - MGP_WSBEiJ_P0019399 Mpp4 protein_coding protein_coding MGP_WSBEiJ_T0019400.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58223989 58265255 - MGP_WSBEiJ_P0019400 Mpp4 protein_coding protein_coding MGP_WSBEiJ_T0019401.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58223989 58267013 - MGP_WSBEiJ_P0019401 Mpp4 protein_coding protein_coding MGP_WSBEiJ_T0019402.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58223990 58265255 - MGP_WSBEiJ_P0019402 Mpp4 protein_coding protein_coding MGP_WSBEiJ_T0019403.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58223994 58250464 - Mpp4 protein_coding processed_transcript MGP_WSBEiJ_T0019404.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58224198 58262280 - MGP_WSBEiJ_P0019404 Mpp4 protein_coding protein_coding MGP_WSBEiJ_T0019405.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58224307 58265186 - Mpp4 protein_coding retained_intron MGP_WSBEiJ_T0019406.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58242946 58257022 - Mpp4 protein_coding retained_intron MGP_WSBEiJ_T0019407.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58242948 58255309 - Mpp4 protein_coding retained_intron MGP_WSBEiJ_T0019408.1 MGP_WSBEiJ_G0015478.1 mouse_genomes_project 1 58252780 58265191 - Mpp4 protein_coding retained_intron MGP_WSBEiJ_T0019014.1 MGP_WSBEiJ_G0015404.1 mouse_genomes_project 1 42752595 42768384 - MGP_WSBEiJ_P0019014 Mettl21e protein_coding protein_coding MGP_WSBEiJ_T0019015.1 MGP_WSBEiJ_G0015404.1 mouse_genomes_project 1 42754947 42768336 - Mettl21e protein_coding retained_intron MGP_WSBEiJ_T0011827.1 MGP_WSBEiJ_G0009957.1 mouse_genomes_project 1 57650565 57765159 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100409.1 MGP_WSBEiJ_G0038868.1 mouse_genomes_project 1 93316775 93316887 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011981.1 MGP_WSBEiJ_G0010111.1 mouse_genomes_project 1 121443536 121444056 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023319.1 MGP_WSBEiJ_G0016305.1 mouse_genomes_project 1 187299076 187320172 + MGP_WSBEiJ_P0023319 Tlr5 protein_coding protein_coding MGP_WSBEiJ_T0023320.1 MGP_WSBEiJ_G0016305.1 mouse_genomes_project 1 187299076 187320529 + MGP_WSBEiJ_P0023320 Tlr5 protein_coding protein_coding MGP_WSBEiJ_T0023321.1 MGP_WSBEiJ_G0016305.1 mouse_genomes_project 1 187299110 187315293 + Tlr5 protein_coding processed_transcript MGP_WSBEiJ_T0023322.1 MGP_WSBEiJ_G0016305.1 mouse_genomes_project 1 187299116 187315057 + Tlr5 protein_coding processed_transcript MGP_WSBEiJ_T0023323.1 MGP_WSBEiJ_G0016305.1 mouse_genomes_project 1 187316656 187320484 + MGP_WSBEiJ_P0023323 Tlr5 protein_coding protein_coding MGP_WSBEiJ_T0000365.1 MGP_WSBEiJ_G0000313.1 mouse_genomes_project 1 13873530 13876510 + TEC TEC MGP_WSBEiJ_T0000492.1 MGP_WSBEiJ_G0000437.1 mouse_genomes_project 1 75306064 75308256 - TEC TEC MGP_WSBEiJ_T0009344.1 MGP_WSBEiJ_G0007501.1 mouse_genomes_project 1 59812608 59812714 - Gm23762 miRNA miRNA MGP_WSBEiJ_T0012055.1 MGP_WSBEiJ_G0010185.1 mouse_genomes_project 1 158260333 158260921 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096751.1 MGP_WSBEiJ_G0035432.1 mouse_genomes_project 1 120970015 120971815 + pseudogene pseudogene MGP_WSBEiJ_T0002689.1 MGP_WSBEiJ_G0002568.1 mouse_genomes_project 1 10561751 10572927 + Gm29570 antisense antisense MGP_WSBEiJ_T0009331.1 MGP_WSBEiJ_G0007488.1 mouse_genomes_project 1 34187063 34187125 - Mir6897 miRNA miRNA MGP_WSBEiJ_T0018473.1 MGP_WSBEiJ_G0015300.1 mouse_genomes_project 1 21452196 21462266 - MGP_WSBEiJ_P0018473 Sdhaf4 protein_coding protein_coding MGP_WSBEiJ_T0018474.1 MGP_WSBEiJ_G0015300.1 mouse_genomes_project 1 21458658 21462240 - Sdhaf4 protein_coding processed_transcript MGP_WSBEiJ_T0000523.1 MGP_WSBEiJ_G0000468.1 mouse_genomes_project 1 87158496 87160807 + TEC TEC MGP_WSBEiJ_T0021338.1 MGP_WSBEiJ_G0015872.1 mouse_genomes_project 1 133877182 133882465 + MGP_WSBEiJ_P0021338 Rab29 protein_coding protein_coding MGP_WSBEiJ_T0021339.1 MGP_WSBEiJ_G0015872.1 mouse_genomes_project 1 133877198 133882612 + MGP_WSBEiJ_P0021339 Rab29 protein_coding protein_coding MGP_WSBEiJ_T0021340.1 MGP_WSBEiJ_G0015872.1 mouse_genomes_project 1 133877469 133882228 + MGP_WSBEiJ_P0021340 Rab29 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021341.1 MGP_WSBEiJ_G0015872.1 mouse_genomes_project 1 133877611 133880899 + Rab29 protein_coding retained_intron MGP_WSBEiJ_T0100427.1 MGP_WSBEiJ_G0038886.1 mouse_genomes_project 1 176860489 176860789 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005774.1 MGP_WSBEiJ_G0004842.1 mouse_genomes_project 1 107294446 107313385 - Gm20753 lincRNA lincRNA MGP_WSBEiJ_T0005747.1 MGP_WSBEiJ_G0004819.1 mouse_genomes_project 1 91639836 91640638 - Gm28199 lincRNA lincRNA MGP_WSBEiJ_T0019194.1 MGP_WSBEiJ_G0015440.1 mouse_genomes_project 1 53246864 53284602 - MGP_WSBEiJ_P0019194 Gtf3c3 protein_coding protein_coding MGP_WSBEiJ_T0019195.1 MGP_WSBEiJ_G0015440.1 mouse_genomes_project 1 53265827 53269733 - Gtf3c3 protein_coding retained_intron MGP_WSBEiJ_T0019196.1 MGP_WSBEiJ_G0015440.1 mouse_genomes_project 1 53272980 53274588 - Gtf3c3 protein_coding retained_intron MGP_WSBEiJ_T0021320.1 MGP_WSBEiJ_G0015865.1 mouse_genomes_project 1 133533583 133545574 + MGP_WSBEiJ_P0021320 Fam72a protein_coding protein_coding MGP_WSBEiJ_T0002716.1 MGP_WSBEiJ_G0002588.1 mouse_genomes_project 1 36023935 36030032 + Gm26805 antisense antisense MGP_WSBEiJ_T0022987.1 MGP_WSBEiJ_G0016229.1 mouse_genomes_project 1 178047266 178048190 - MGP_WSBEiJ_P0022987 Olfr231 protein_coding protein_coding MGP_WSBEiJ_T0005582.1 MGP_WSBEiJ_G0004695.1 mouse_genomes_project 1 21029609 21055534 + Gm28822 lincRNA lincRNA MGP_WSBEiJ_T0012057.1 MGP_WSBEiJ_G0010187.1 mouse_genomes_project 1 158260339 158260921 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002856.1 MGP_WSBEiJ_G0002696.1 mouse_genomes_project 1 164391212 164392186 + Gm37362 antisense antisense MGP_WSBEiJ_T0002680.1 MGP_WSBEiJ_G0002564.1 mouse_genomes_project 1 2040139 2045153 + Gm16041 antisense antisense MGP_WSBEiJ_T0000659.1 MGP_WSBEiJ_G0000602.1 mouse_genomes_project 1 159098929 159100122 + TEC TEC MGP_WSBEiJ_T0000490.1 MGP_WSBEiJ_G0000435.1 mouse_genomes_project 1 74356570 74359527 - TEC TEC MGP_WSBEiJ_T0000356.1 MGP_WSBEiJ_G0000304.1 mouse_genomes_project 1 10540203 10542461 - TEC TEC MGP_WSBEiJ_T0097251.1 MGP_WSBEiJ_G0035931.1 mouse_genomes_project 1 146356967 146360633 + Gm29170 sense_intronic sense_intronic MGP_WSBEiJ_T0018804.1 MGP_WSBEiJ_G0015360.1 mouse_genomes_project 1 36114732 36117007 - Lyg1 protein_coding processed_transcript MGP_WSBEiJ_T0018805.1 MGP_WSBEiJ_G0015360.1 mouse_genomes_project 1 36114732 36126981 - MGP_WSBEiJ_P0018805 Lyg1 protein_coding protein_coding MGP_WSBEiJ_T0018806.1 MGP_WSBEiJ_G0015360.1 mouse_genomes_project 1 36114734 36126981 - MGP_WSBEiJ_P0018806 Lyg1 protein_coding protein_coding MGP_WSBEiJ_T0022615.1 MGP_WSBEiJ_G0016128.1 mouse_genomes_project 1 173310278 173316461 - MGP_WSBEiJ_P0022615 Rgs4 protein_coding protein_coding MGP_WSBEiJ_T0022616.1 MGP_WSBEiJ_G0016128.1 mouse_genomes_project 1 173312528 173316459 - MGP_WSBEiJ_P0022616 Rgs4 protein_coding protein_coding MGP_WSBEiJ_T0022617.1 MGP_WSBEiJ_G0016128.1 mouse_genomes_project 1 173312676 173316442 - Rgs4 protein_coding retained_intron MGP_WSBEiJ_T0011980.1 MGP_WSBEiJ_G0010110.1 mouse_genomes_project 1 121353897 121354561 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000472.1 MGP_WSBEiJ_G0000417.1 mouse_genomes_project 1 66185703 66188258 - TEC TEC MGP_WSBEiJ_T0023503.1 MGP_WSBEiJ_G0016341.1 mouse_genomes_project 1 195630376 195636272 - Mfsd7b protein_coding retained_intron MGP_WSBEiJ_T0023504.1 MGP_WSBEiJ_G0016341.1 mouse_genomes_project 1 195630376 195651062 - MGP_WSBEiJ_P0023504 Mfsd7b protein_coding protein_coding MGP_WSBEiJ_T0023505.1 MGP_WSBEiJ_G0016341.1 mouse_genomes_project 1 195630378 195650871 - MGP_WSBEiJ_P0023505 Mfsd7b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023506.1 MGP_WSBEiJ_G0016341.1 mouse_genomes_project 1 195630379 195632980 - Mfsd7b protein_coding retained_intron MGP_WSBEiJ_T0023507.1 MGP_WSBEiJ_G0016341.1 mouse_genomes_project 1 195637348 195639475 - Mfsd7b protein_coding retained_intron MGP_WSBEiJ_T0023508.1 MGP_WSBEiJ_G0016341.1 mouse_genomes_project 1 195649812 195651028 - MGP_WSBEiJ_P0023508 Mfsd7b protein_coding protein_coding MGP_WSBEiJ_T0100424.1 MGP_WSBEiJ_G0038883.1 mouse_genomes_project 1 164540769 164598592 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0021890.1 MGP_WSBEiJ_G0015986.1 mouse_genomes_project 1 153286259 153302609 - MGP_WSBEiJ_P0021890 Prg4 protein_coding protein_coding MGP_WSBEiJ_T0021891.1 MGP_WSBEiJ_G0015986.1 mouse_genomes_project 1 153286259 153302609 - MGP_WSBEiJ_P0021891 Prg4 protein_coding protein_coding MGP_WSBEiJ_T0021892.1 MGP_WSBEiJ_G0015986.1 mouse_genomes_project 1 153286259 153302609 - MGP_WSBEiJ_P0021892 Prg4 protein_coding protein_coding MGP_WSBEiJ_T0021893.1 MGP_WSBEiJ_G0015986.1 mouse_genomes_project 1 153286663 153303176 - MGP_WSBEiJ_P0021893 Prg4 protein_coding protein_coding MGP_WSBEiJ_T0021894.1 MGP_WSBEiJ_G0015986.1 mouse_genomes_project 1 153293007 153303176 - MGP_WSBEiJ_P0021894 Prg4 protein_coding protein_coding MGP_WSBEiJ_T0021895.1 MGP_WSBEiJ_G0015986.1 mouse_genomes_project 1 153295202 153303176 - MGP_WSBEiJ_P0021895 Prg4 protein_coding protein_coding MGP_WSBEiJ_T0000665.1 MGP_WSBEiJ_G0000608.1 mouse_genomes_project 1 159990814 159993457 - TEC TEC MGP_WSBEiJ_T0019022.1 MGP_WSBEiJ_G0015406.1 mouse_genomes_project 1 43782458 43799654 + Col3a1 protein_coding retained_intron MGP_WSBEiJ_T0019023.1 MGP_WSBEiJ_G0015406.1 mouse_genomes_project 1 43782458 43830108 + MGP_WSBEiJ_P0019023 Col3a1 protein_coding protein_coding MGP_WSBEiJ_T0019024.1 MGP_WSBEiJ_G0015406.1 mouse_genomes_project 1 43782567 43787826 + Col3a1 protein_coding processed_transcript MGP_WSBEiJ_T0019025.1 MGP_WSBEiJ_G0015406.1 mouse_genomes_project 1 43802234 43803540 + Col3a1 protein_coding retained_intron MGP_WSBEiJ_T0019026.1 MGP_WSBEiJ_G0015406.1 mouse_genomes_project 1 43809315 43812413 + Col3a1 protein_coding retained_intron MGP_WSBEiJ_T0019027.1 MGP_WSBEiJ_G0015406.1 mouse_genomes_project 1 43810881 43818717 + MGP_WSBEiJ_P0019027 Col3a1 protein_coding protein_coding MGP_WSBEiJ_T0019028.1 MGP_WSBEiJ_G0015406.1 mouse_genomes_project 1 43818002 43828169 + MGP_WSBEiJ_P0019028 Col3a1 protein_coding protein_coding MGP_WSBEiJ_T0000487.1 MGP_WSBEiJ_G0000432.1 mouse_genomes_project 1 73021335 73023865 - TEC TEC MGP_WSBEiJ_T0005726.1 MGP_WSBEiJ_G0004799.1 mouse_genomes_project 1 82938399 82938935 + Gm28942 lincRNA lincRNA MGP_WSBEiJ_T0096893.1 MGP_WSBEiJ_G0035574.1 mouse_genomes_project 1 186125224 186125340 - Gm26004 rRNA rRNA MGP_WSBEiJ_T0018668.1 MGP_WSBEiJ_G0015336.1 mouse_genomes_project 1 34428128 34478802 + MGP_WSBEiJ_P0018668 Fer1l5 protein_coding protein_coding MGP_WSBEiJ_T0018669.1 MGP_WSBEiJ_G0015336.1 mouse_genomes_project 1 34441327 34461559 + MGP_WSBEiJ_P0018669 Fer1l5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018670.1 MGP_WSBEiJ_G0015336.1 mouse_genomes_project 1 34473582 34478805 + MGP_WSBEiJ_P0018670 Fer1l5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023217.1 MGP_WSBEiJ_G0016281.1 mouse_genomes_project 1 185054077 185074970 + MGP_WSBEiJ_P0023217 Sde2 protein_coding protein_coding MGP_WSBEiJ_T0023218.1 MGP_WSBEiJ_G0016281.1 mouse_genomes_project 1 185068955 185073110 + Sde2 protein_coding retained_intron MGP_WSBEiJ_T0023227.1 MGP_WSBEiJ_G0016285.1 mouse_genomes_project 1 185159498 185171282 + MGP_WSBEiJ_P0023227 Tmem63a protein_coding protein_coding MGP_WSBEiJ_T0023228.1 MGP_WSBEiJ_G0016285.1 mouse_genomes_project 1 185159612 185173982 + MGP_WSBEiJ_P0023228 Tmem63a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023229.1 MGP_WSBEiJ_G0016285.1 mouse_genomes_project 1 185159613 185195562 + MGP_WSBEiJ_P0023229 Tmem63a protein_coding protein_coding MGP_WSBEiJ_T0023230.1 MGP_WSBEiJ_G0016285.1 mouse_genomes_project 1 185159728 185176488 + MGP_WSBEiJ_P0023230 Tmem63a protein_coding protein_coding MGP_WSBEiJ_T0023231.1 MGP_WSBEiJ_G0016285.1 mouse_genomes_project 1 185161189 185195553 + MGP_WSBEiJ_P0023231 Tmem63a protein_coding protein_coding MGP_WSBEiJ_T0023232.1 MGP_WSBEiJ_G0016285.1 mouse_genomes_project 1 185163058 185163867 + MGP_WSBEiJ_P0023232 Tmem63a protein_coding protein_coding MGP_WSBEiJ_T0023233.1 MGP_WSBEiJ_G0016285.1 mouse_genomes_project 1 185163114 185165995 + MGP_WSBEiJ_P0023233 Tmem63a protein_coding protein_coding MGP_WSBEiJ_T0023234.1 MGP_WSBEiJ_G0016285.1 mouse_genomes_project 1 185180543 185181318 + Tmem63a protein_coding retained_intron MGP_WSBEiJ_T0020912.1 MGP_WSBEiJ_G0015776.1 mouse_genomes_project 1 105868569 106101210 + MGP_WSBEiJ_P0020912 Cdh20 protein_coding protein_coding MGP_WSBEiJ_T0012004.1 MGP_WSBEiJ_G0010134.1 mouse_genomes_project 1 133448007 133448263 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012116.1 MGP_WSBEiJ_G0010246.1 mouse_genomes_project 1 186383227 186383644 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020109.1 MGP_WSBEiJ_G0015604.1 mouse_genomes_project 1 75312044 75316740 - MGP_WSBEiJ_P0020109 Chpf protein_coding protein_coding MGP_WSBEiJ_T0020110.1 MGP_WSBEiJ_G0015604.1 mouse_genomes_project 1 75312050 75316776 - MGP_WSBEiJ_P0020110 Chpf protein_coding protein_coding MGP_WSBEiJ_T0020111.1 MGP_WSBEiJ_G0015604.1 mouse_genomes_project 1 75312051 75316222 - Chpf protein_coding retained_intron MGP_WSBEiJ_T0020112.1 MGP_WSBEiJ_G0015604.1 mouse_genomes_project 1 75312051 75316588 - MGP_WSBEiJ_P0020112 Chpf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020113.1 MGP_WSBEiJ_G0015604.1 mouse_genomes_project 1 75314985 75316583 - MGP_WSBEiJ_P0020113 Chpf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020350.1 MGP_WSBEiJ_G0015652.1 mouse_genomes_project 1 86133397 86136659 + MGP_WSBEiJ_P0020350 protein_coding protein_coding MGP_WSBEiJ_T0020351.1 MGP_WSBEiJ_G0015652.1 mouse_genomes_project 1 86133641 86146941 + MGP_WSBEiJ_P0020351 protein_coding protein_coding MGP_WSBEiJ_T0020352.1 MGP_WSBEiJ_G0015652.1 mouse_genomes_project 1 86133800 86136659 + protein_coding retained_intron MGP_WSBEiJ_T0020198.1 MGP_WSBEiJ_G0015621.1 mouse_genomes_project 1 79769071 79774498 + MGP_WSBEiJ_P0020198 Mrpl44 protein_coding protein_coding MGP_WSBEiJ_T0020199.1 MGP_WSBEiJ_G0015621.1 mouse_genomes_project 1 79769169 79771599 + Mrpl44 protein_coding retained_intron MGP_WSBEiJ_T0023425.1 MGP_WSBEiJ_G0016329.1 mouse_genomes_project 1 191645691 191666003 + Gpatch2 protein_coding processed_transcript MGP_WSBEiJ_T0023426.1 MGP_WSBEiJ_G0016329.1 mouse_genomes_project 1 191645694 191786536 + MGP_WSBEiJ_P0023426 Gpatch2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023427.1 MGP_WSBEiJ_G0016329.1 mouse_genomes_project 1 191645694 191788592 + MGP_WSBEiJ_P0023427 Gpatch2 protein_coding protein_coding MGP_WSBEiJ_T0023428.1 MGP_WSBEiJ_G0016329.1 mouse_genomes_project 1 191645705 191788595 + MGP_WSBEiJ_P0023428 Gpatch2 protein_coding protein_coding MGP_WSBEiJ_T0023429.1 MGP_WSBEiJ_G0016329.1 mouse_genomes_project 1 191645721 191738874 + Gpatch2 protein_coding retained_intron MGP_WSBEiJ_T0023430.1 MGP_WSBEiJ_G0016329.1 mouse_genomes_project 1 191645727 191664589 + MGP_WSBEiJ_P0023430 Gpatch2 protein_coding protein_coding MGP_WSBEiJ_T0023431.1 MGP_WSBEiJ_G0016329.1 mouse_genomes_project 1 191645729 191664073 + MGP_WSBEiJ_P0023431 Gpatch2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023432.1 MGP_WSBEiJ_G0016329.1 mouse_genomes_project 1 191645926 191787619 + MGP_WSBEiJ_P0023432 Gpatch2 protein_coding protein_coding MGP_WSBEiJ_T0000545.1 MGP_WSBEiJ_G0000490.1 mouse_genomes_project 1 98788439 98790123 - TEC TEC MGP_WSBEiJ_T0011722.1 MGP_WSBEiJ_G0009852.1 mouse_genomes_project 1 24909005 24909422 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002782.1 MGP_WSBEiJ_G0002638.1 mouse_genomes_project 1 88204549 88205501 - Gm19582 antisense antisense MGP_WSBEiJ_T0022044.1 MGP_WSBEiJ_G0016017.1 mouse_genomes_project 1 158167646 158170923 - MGP_WSBEiJ_P0022044 Ier5 protein_coding protein_coding MGP_WSBEiJ_T0020153.1 MGP_WSBEiJ_G0015610.1 mouse_genomes_project 1 77282342 77430477 - MGP_WSBEiJ_P0020153 Epha4 protein_coding protein_coding MGP_WSBEiJ_T0020154.1 MGP_WSBEiJ_G0015610.1 mouse_genomes_project 1 77282346 77430525 - MGP_WSBEiJ_P0020154 Epha4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020155.1 MGP_WSBEiJ_G0015610.1 mouse_genomes_project 1 77288790 77430525 - MGP_WSBEiJ_P0020155 Epha4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020156.1 MGP_WSBEiJ_G0015610.1 mouse_genomes_project 1 77314122 77430531 - Epha4 protein_coding retained_intron MGP_WSBEiJ_T0020157.1 MGP_WSBEiJ_G0015610.1 mouse_genomes_project 1 77318449 77430529 - MGP_WSBEiJ_P0020157 Epha4 protein_coding protein_coding MGP_WSBEiJ_T0005958.1 MGP_WSBEiJ_G0004986.1 mouse_genomes_project 1 192726416 192739558 + Gm38064 lincRNA lincRNA MGP_WSBEiJ_T0012035.1 MGP_WSBEiJ_G0010165.1 mouse_genomes_project 1 151286405 151287099 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002704.1 MGP_WSBEiJ_G0002578.1 mouse_genomes_project 1 18436380 18438015 + Gm28287 antisense antisense MGP_WSBEiJ_T0096880.1 MGP_WSBEiJ_G0035561.1 mouse_genomes_project 1 85869803 85869907 + n-R5s215 rRNA rRNA MGP_WSBEiJ_T0000342.1 MGP_WSBEiJ_G0000290.1 mouse_genomes_project 1 7109464 7110807 + TEC TEC MGP_WSBEiJ_T0018898.1 MGP_WSBEiJ_G0015379.1 mouse_genomes_project 1 38504304 38606756 + MGP_WSBEiJ_P0018898 Il1r1 protein_coding protein_coding MGP_WSBEiJ_T0018899.1 MGP_WSBEiJ_G0015379.1 mouse_genomes_project 1 38545960 38556547 + Il1r1 protein_coding processed_transcript MGP_WSBEiJ_T0018900.1 MGP_WSBEiJ_G0015379.1 mouse_genomes_project 1 38551020 38605670 + MGP_WSBEiJ_P0018900 Il1r1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012031.1 MGP_WSBEiJ_G0010161.1 mouse_genomes_project 1 147799053 147800046 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020282.1 MGP_WSBEiJ_G0015639.1 mouse_genomes_project 1 83400614 83555800 - MGP_WSBEiJ_P0020282 Sphkap protein_coding protein_coding MGP_WSBEiJ_T0020283.1 MGP_WSBEiJ_G0015639.1 mouse_genomes_project 1 83401921 83555607 - MGP_WSBEiJ_P0020283 Sphkap protein_coding unknown_likely_coding MGP_WSBEiJ_T0020284.1 MGP_WSBEiJ_G0015639.1 mouse_genomes_project 1 83401925 83427759 - MGP_WSBEiJ_P0020284 Sphkap protein_coding protein_coding MGP_WSBEiJ_T0020285.1 MGP_WSBEiJ_G0015639.1 mouse_genomes_project 1 83412511 83555765 - Sphkap protein_coding retained_intron MGP_WSBEiJ_T0020286.1 MGP_WSBEiJ_G0015639.1 mouse_genomes_project 1 83486456 83555739 - Sphkap protein_coding retained_intron MGP_WSBEiJ_T0020287.1 MGP_WSBEiJ_G0015639.1 mouse_genomes_project 1 83532293 83555765 - Sphkap protein_coding retained_intron MGP_WSBEiJ_T0021688.1 MGP_WSBEiJ_G0015946.1 mouse_genomes_project 1 138368455 138369022 + MGP_WSBEiJ_P0021688 Ascl5 protein_coding protein_coding MGP_WSBEiJ_T0000374.1 MGP_WSBEiJ_G0000321.1 mouse_genomes_project 1 21462114 21462504 + TEC TEC MGP_WSBEiJ_T0000375.1 MGP_WSBEiJ_G0000321.1 mouse_genomes_project 1 21462116 21462504 + TEC TEC MGP_WSBEiJ_T0018779.1 MGP_WSBEiJ_G0015355.1 mouse_genomes_project 1 35908415 36023716 - MGP_WSBEiJ_P0018779 Tsga10 protein_coding protein_coding MGP_WSBEiJ_T0018780.1 MGP_WSBEiJ_G0015355.1 mouse_genomes_project 1 35920360 36025066 - MGP_WSBEiJ_P0018780 Tsga10 protein_coding protein_coding MGP_WSBEiJ_T0018781.1 MGP_WSBEiJ_G0015355.1 mouse_genomes_project 1 35920360 36014011 - MGP_WSBEiJ_P0018781 Tsga10 protein_coding protein_coding MGP_WSBEiJ_T0018782.1 MGP_WSBEiJ_G0015355.1 mouse_genomes_project 1 35955866 36013984 - MGP_WSBEiJ_P0018782 Tsga10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018783.1 MGP_WSBEiJ_G0015355.1 mouse_genomes_project 1 35990244 36023473 - MGP_WSBEiJ_P0018783 Tsga10 protein_coding protein_coding MGP_WSBEiJ_T0018784.1 MGP_WSBEiJ_G0015355.1 mouse_genomes_project 1 35991276 36023710 - MGP_WSBEiJ_P0018784 Tsga10 protein_coding protein_coding MGP_WSBEiJ_T0018785.1 MGP_WSBEiJ_G0015355.1 mouse_genomes_project 1 35992112 36023710 - MGP_WSBEiJ_P0018785 Tsga10 protein_coding protein_coding MGP_WSBEiJ_T0018786.1 MGP_WSBEiJ_G0015355.1 mouse_genomes_project 1 35997845 36002358 - Tsga10 protein_coding retained_intron MGP_WSBEiJ_T0000495.1 MGP_WSBEiJ_G0000440.1 mouse_genomes_project 1 78423367 78424846 - TEC TEC MGP_WSBEiJ_T0019693.1 MGP_WSBEiJ_G0015532.1 mouse_genomes_project 1 66349484 66372785 - MGP_WSBEiJ_P0019693 Myl1 protein_coding protein_coding MGP_WSBEiJ_T0019694.1 MGP_WSBEiJ_G0015532.1 mouse_genomes_project 1 66349484 66360629 - MGP_WSBEiJ_P0019694 Myl1 protein_coding protein_coding MGP_WSBEiJ_T0019695.1 MGP_WSBEiJ_G0015532.1 mouse_genomes_project 1 66349487 66360346 - MGP_WSBEiJ_P0019695 Myl1 protein_coding protein_coding MGP_WSBEiJ_T0019696.1 MGP_WSBEiJ_G0015532.1 mouse_genomes_project 1 66350193 66360342 - Myl1 protein_coding processed_transcript MGP_WSBEiJ_T0019697.1 MGP_WSBEiJ_G0015532.1 mouse_genomes_project 1 66351235 66360325 - MGP_WSBEiJ_P0019697 Myl1 protein_coding protein_coding MGP_WSBEiJ_T0019698.1 MGP_WSBEiJ_G0015532.1 mouse_genomes_project 1 66351831 66373025 - MGP_WSBEiJ_P0019698 Myl1 protein_coding protein_coding MGP_WSBEiJ_T0019699.1 MGP_WSBEiJ_G0015532.1 mouse_genomes_project 1 66355153 66359682 - Myl1 protein_coding retained_intron MGP_WSBEiJ_T0019700.1 MGP_WSBEiJ_G0015532.1 mouse_genomes_project 1 66372104 66373045 - Myl1 protein_coding retained_intron MGP_WSBEiJ_T0021959.1 MGP_WSBEiJ_G0015998.1 mouse_genomes_project 1 155688860 155696659 + MGP_WSBEiJ_P0021959 Apobec4 protein_coding protein_coding MGP_WSBEiJ_T0002894.1 MGP_WSBEiJ_G0002725.1 mouse_genomes_project 1 182400557 182403622 - antisense antisense MGP_WSBEiJ_T0019183.1 MGP_WSBEiJ_G0015438.1 mouse_genomes_project 1 52662907 53061496 - MGP_WSBEiJ_P0019183 Hecw2 protein_coding protein_coding MGP_WSBEiJ_T0019184.1 MGP_WSBEiJ_G0015438.1 mouse_genomes_project 1 52662913 53062476 - MGP_WSBEiJ_P0019184 Hecw2 protein_coding protein_coding MGP_WSBEiJ_T0019185.1 MGP_WSBEiJ_G0015438.1 mouse_genomes_project 1 52691399 52699745 - Hecw2 protein_coding processed_transcript MGP_WSBEiJ_T0019186.1 MGP_WSBEiJ_G0015438.1 mouse_genomes_project 1 52697590 52726013 - Hecw2 protein_coding processed_transcript MGP_WSBEiJ_T0019187.1 MGP_WSBEiJ_G0015438.1 mouse_genomes_project 1 52790969 53062476 - MGP_WSBEiJ_P0019187 Hecw2 protein_coding protein_coding MGP_WSBEiJ_T0019188.1 MGP_WSBEiJ_G0015438.1 mouse_genomes_project 1 52802289 53062610 - Hecw2 protein_coding retained_intron MGP_WSBEiJ_T0021563.1 MGP_WSBEiJ_G0015921.1 mouse_genomes_project 1 136687901 136702625 + MGP_WSBEiJ_P0021563 Rabif protein_coding protein_coding MGP_WSBEiJ_T0020708.1 MGP_WSBEiJ_G0015732.1 mouse_genomes_project 1 93341388 93343432 + MGP_WSBEiJ_P0020708 Olfr12 protein_coding protein_coding MGP_WSBEiJ_T0000679.1 MGP_WSBEiJ_G0000622.1 mouse_genomes_project 1 163903210 163906702 - TEC TEC MGP_WSBEiJ_T0020737.1 MGP_WSBEiJ_G0015739.1 mouse_genomes_project 1 93672729 93690689 + MGP_WSBEiJ_P0020737 Capn10 protein_coding protein_coding MGP_WSBEiJ_T0020738.1 MGP_WSBEiJ_G0015739.1 mouse_genomes_project 1 93673119 93679348 + MGP_WSBEiJ_P0020738 Capn10 protein_coding protein_coding MGP_WSBEiJ_T0020739.1 MGP_WSBEiJ_G0015739.1 mouse_genomes_project 1 93673186 93690677 + MGP_WSBEiJ_P0020739 Capn10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020740.1 MGP_WSBEiJ_G0015739.1 mouse_genomes_project 1 93678834 93687847 + MGP_WSBEiJ_P0020740 Capn10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020741.1 MGP_WSBEiJ_G0015739.1 mouse_genomes_project 1 93685447 93686488 + Capn10 protein_coding retained_intron MGP_WSBEiJ_T0020742.1 MGP_WSBEiJ_G0015739.1 mouse_genomes_project 1 93689300 93689703 + Capn10 protein_coding processed_transcript MGP_WSBEiJ_T0020743.1 MGP_WSBEiJ_G0015739.1 mouse_genomes_project 1 93689632 93690338 + Capn10 protein_coding retained_intron MGP_WSBEiJ_T0019338.1 MGP_WSBEiJ_G0015467.1 mouse_genomes_project 1 57454227 57473414 + MGP_WSBEiJ_P0019338 Nif3l1 protein_coding protein_coding MGP_WSBEiJ_T0019339.1 MGP_WSBEiJ_G0015467.1 mouse_genomes_project 1 57454343 57494569 + MGP_WSBEiJ_P0019339 Nif3l1 protein_coding protein_coding MGP_WSBEiJ_T0019340.1 MGP_WSBEiJ_G0015467.1 mouse_genomes_project 1 57454704 57459584 + MGP_WSBEiJ_P0019340 Nif3l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019341.1 MGP_WSBEiJ_G0015467.1 mouse_genomes_project 1 57454805 57457127 + MGP_WSBEiJ_P0019341 Nif3l1 protein_coding protein_coding MGP_WSBEiJ_T0019342.1 MGP_WSBEiJ_G0015467.1 mouse_genomes_project 1 57456707 57472224 + MGP_WSBEiJ_P0019342 Nif3l1 protein_coding protein_coding MGP_WSBEiJ_T0019343.1 MGP_WSBEiJ_G0015467.1 mouse_genomes_project 1 57458243 57467758 + Nif3l1 protein_coding retained_intron MGP_WSBEiJ_T0019344.1 MGP_WSBEiJ_G0015467.1 mouse_genomes_project 1 57463139 57466148 + Nif3l1 protein_coding retained_intron MGP_WSBEiJ_T0019345.1 MGP_WSBEiJ_G0015467.1 mouse_genomes_project 1 57467642 57471342 + Nif3l1 protein_coding retained_intron MGP_WSBEiJ_T0021055.1 MGP_WSBEiJ_G0015807.1 mouse_genomes_project 1 120913338 120947770 - MGP_WSBEiJ_P0021055 Ralb protein_coding protein_coding MGP_WSBEiJ_T0021056.1 MGP_WSBEiJ_G0015807.1 mouse_genomes_project 1 120915178 120921081 - MGP_WSBEiJ_P0021056 Ralb protein_coding protein_coding MGP_WSBEiJ_T0021057.1 MGP_WSBEiJ_G0015807.1 mouse_genomes_project 1 120924134 120947770 - Ralb protein_coding retained_intron MGP_WSBEiJ_T0009329.1 MGP_WSBEiJ_G0007486.1 mouse_genomes_project 1 32066083 32066156 + Mir6896 miRNA miRNA MGP_WSBEiJ_T0018179.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5456848 6396888 - MGP_WSBEiJ_P0018179 Sntg1 protein_coding protein_coding MGP_WSBEiJ_T0018180.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5456848 6396223 - MGP_WSBEiJ_P0018180 Sntg1 protein_coding protein_coding MGP_WSBEiJ_T0018181.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5456848 6396514 - MGP_WSBEiJ_P0018181 Sntg1 protein_coding protein_coding MGP_WSBEiJ_T0018182.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5458051 6397529 - MGP_WSBEiJ_P0018182 Sntg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018183.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5458556 5561364 - Sntg1 protein_coding processed_transcript MGP_WSBEiJ_T0018184.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5458798 5561323 - Sntg1 protein_coding processed_transcript MGP_WSBEiJ_T0018185.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5458848 5893217 - MGP_WSBEiJ_P0018185 Sntg1 protein_coding protein_coding MGP_WSBEiJ_T0018186.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5766511 6396932 - MGP_WSBEiJ_P0018186 Sntg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018187.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 5860156 6397159 - Sntg1 protein_coding retained_intron MGP_WSBEiJ_T0018188.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 6044092 6046233 - Sntg1 protein_coding retained_intron MGP_WSBEiJ_T0018189.1 MGP_WSBEiJ_G0015238.1 mouse_genomes_project 1 6044382 6395876 - Sntg1 protein_coding processed_transcript MGP_WSBEiJ_T0002774.1 MGP_WSBEiJ_G0002630.1 mouse_genomes_project 1 75228970 75233206 - Gm15178 antisense antisense MGP_WSBEiJ_T0098765.1 MGP_WSBEiJ_G0037428.1 mouse_genomes_project 1 66283886 66284016 + Gm25832 snoRNA snoRNA MGP_WSBEiJ_T0012092.1 MGP_WSBEiJ_G0010222.1 mouse_genomes_project 1 173194497 173195062 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000596.1 MGP_WSBEiJ_G0000541.1 mouse_genomes_project 1 133087918 133093787 - TEC TEC MGP_WSBEiJ_T0011749.1 MGP_WSBEiJ_G0009879.1 mouse_genomes_project 1 32748884 32749032 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023288.1 MGP_WSBEiJ_G0016296.1 mouse_genomes_project 1 186441677 186449405 + MGP_WSBEiJ_P0023288 Srp9 protein_coding protein_coding MGP_WSBEiJ_T0023289.1 MGP_WSBEiJ_G0016296.1 mouse_genomes_project 1 186441690 186449893 + MGP_WSBEiJ_P0023289 Srp9 protein_coding protein_coding MGP_WSBEiJ_T0023290.1 MGP_WSBEiJ_G0016296.1 mouse_genomes_project 1 186441721 186446067 + Srp9 protein_coding retained_intron MGP_WSBEiJ_T0023291.1 MGP_WSBEiJ_G0016296.1 mouse_genomes_project 1 186448234 186449291 + Srp9 protein_coding retained_intron MGP_WSBEiJ_T0005925.1 MGP_WSBEiJ_G0004962.1 mouse_genomes_project 1 186595963 186611754 + 1700047M11Rik lincRNA lincRNA MGP_WSBEiJ_T0005926.1 MGP_WSBEiJ_G0004962.1 mouse_genomes_project 1 186609262 186611716 + 1700047M11Rik lincRNA lincRNA MGP_WSBEiJ_T0097248.1 MGP_WSBEiJ_G0035928.1 mouse_genomes_project 1 137692235 137696829 - Gm28277 sense_intronic sense_intronic MGP_WSBEiJ_T0000627.1 MGP_WSBEiJ_G0000570.1 mouse_genomes_project 1 140990087 140993768 - TEC TEC MGP_WSBEiJ_T0012052.1 MGP_WSBEiJ_G0010182.1 mouse_genomes_project 1 155336883 155337335 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019617.1 MGP_WSBEiJ_G0015516.1 mouse_genomes_project 1 64395807 64399233 - MGP_WSBEiJ_P0019617 protein_coding protein_coding MGP_WSBEiJ_T0012075.1 MGP_WSBEiJ_G0010205.1 mouse_genomes_project 1 166033775 166034498 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018332.1 MGP_WSBEiJ_G0015262.1 mouse_genomes_project 1 11962527 11965170 - MGP_WSBEiJ_P0018332 Msc protein_coding protein_coding MGP_WSBEiJ_T0018333.1 MGP_WSBEiJ_G0015262.1 mouse_genomes_project 1 11962927 11964533 - MGP_WSBEiJ_P0018333 Msc protein_coding protein_coding MGP_WSBEiJ_T0018334.1 MGP_WSBEiJ_G0015262.1 mouse_genomes_project 1 11963116 11963845 - Msc protein_coding retained_intron MGP_WSBEiJ_T0018335.1 MGP_WSBEiJ_G0015262.1 mouse_genomes_project 1 11963946 11965172 - Msc protein_coding retained_intron MGP_WSBEiJ_T0002688.1 MGP_WSBEiJ_G0002567.1 mouse_genomes_project 1 7124417 7137598 + Gm15818 antisense antisense MGP_WSBEiJ_T0000469.1 MGP_WSBEiJ_G0000414.1 mouse_genomes_project 1 64075815 64080519 + TEC TEC MGP_WSBEiJ_T0005867.1 MGP_WSBEiJ_G0004916.1 mouse_genomes_project 1 162219747 162232497 - 1600012P17Rik lincRNA lincRNA MGP_WSBEiJ_T0005868.1 MGP_WSBEiJ_G0004916.1 mouse_genomes_project 1 162221655 162232105 - 1600012P17Rik lincRNA lincRNA MGP_WSBEiJ_T0005586.1 MGP_WSBEiJ_G0004698.1 mouse_genomes_project 1 25489444 25510037 + Gm5524 lincRNA lincRNA MGP_WSBEiJ_T0022015.1 MGP_WSBEiJ_G0016010.1 mouse_genomes_project 1 156774584 156786303 + MGP_WSBEiJ_P0022015 Rnasel protein_coding protein_coding MGP_WSBEiJ_T0022016.1 MGP_WSBEiJ_G0016010.1 mouse_genomes_project 1 156776711 156787533 + MGP_WSBEiJ_P0022016 Rnasel protein_coding protein_coding MGP_WSBEiJ_T0022017.1 MGP_WSBEiJ_G0016010.1 mouse_genomes_project 1 156776712 156786303 + MGP_WSBEiJ_P0022017 Rnasel protein_coding protein_coding MGP_WSBEiJ_T0022018.1 MGP_WSBEiJ_G0016010.1 mouse_genomes_project 1 156776728 156786086 + Rnasel protein_coding retained_intron MGP_WSBEiJ_T0022019.1 MGP_WSBEiJ_G0016010.1 mouse_genomes_project 1 156780693 156786086 + Rnasel protein_coding processed_transcript MGP_WSBEiJ_T0021463.1 MGP_WSBEiJ_G0015897.1 mouse_genomes_project 1 135469743 135474125 + MGP_WSBEiJ_P0021463 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0002679.1 MGP_WSBEiJ_G0002563.1 mouse_genomes_project 1 494138 542382 + Gm1992 antisense antisense MGP_WSBEiJ_T0100394.1 MGP_WSBEiJ_G0038853.1 mouse_genomes_project 1 64789549 64790229 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100418.1 MGP_WSBEiJ_G0038877.1 mouse_genomes_project 1 119129984 119155805 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0019166.1 MGP_WSBEiJ_G0015432.1 mouse_genomes_project 1 52087528 52092381 + protein_coding retained_intron MGP_WSBEiJ_T0005897.1 MGP_WSBEiJ_G0004940.1 mouse_genomes_project 1 170767841 170768540 + Gm2453 lincRNA lincRNA MGP_WSBEiJ_T0005898.1 MGP_WSBEiJ_G0004940.1 mouse_genomes_project 1 170768257 170772629 + Gm2453 lincRNA lincRNA MGP_WSBEiJ_T0018923.1 MGP_WSBEiJ_G0015385.1 mouse_genomes_project 1 38985055 39074729 + MGP_WSBEiJ_P0018923 Slc9a2 protein_coding protein_coding MGP_WSBEiJ_T0018924.1 MGP_WSBEiJ_G0015385.1 mouse_genomes_project 1 38986053 39029209 + MGP_WSBEiJ_P0018924 Slc9a2 protein_coding protein_coding MGP_WSBEiJ_T0018925.1 MGP_WSBEiJ_G0015385.1 mouse_genomes_project 1 39060073 39061389 + Slc9a2 protein_coding retained_intron MGP_WSBEiJ_T0023026.1 MGP_WSBEiJ_G0016244.1 mouse_genomes_project 1 179642713 179652858 - MGP_WSBEiJ_P0023026 Chml protein_coding protein_coding MGP_WSBEiJ_T0012007.1 MGP_WSBEiJ_G0010137.1 mouse_genomes_project 1 134323816 134326189 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005814.1 MGP_WSBEiJ_G0004873.1 mouse_genomes_project 1 134057836 134090332 + Gm26892 lincRNA lincRNA MGP_WSBEiJ_T0021567.1 MGP_WSBEiJ_G0015923.1 mouse_genomes_project 1 136756328 136844158 + MGP_WSBEiJ_P0021567 Kdm5b protein_coding protein_coding MGP_WSBEiJ_T0021568.1 MGP_WSBEiJ_G0015923.1 mouse_genomes_project 1 136756338 136839622 + MGP_WSBEiJ_P0021568 Kdm5b protein_coding unknown_likely_coding MGP_WSBEiJ_T0021569.1 MGP_WSBEiJ_G0015923.1 mouse_genomes_project 1 136756349 136840334 + MGP_WSBEiJ_P0021569 Kdm5b protein_coding protein_coding MGP_WSBEiJ_T0021570.1 MGP_WSBEiJ_G0015923.1 mouse_genomes_project 1 136756364 136815600 + Kdm5b protein_coding retained_intron MGP_WSBEiJ_T0021571.1 MGP_WSBEiJ_G0015923.1 mouse_genomes_project 1 136795629 136798340 + Kdm5b protein_coding retained_intron MGP_WSBEiJ_T0021572.1 MGP_WSBEiJ_G0015923.1 mouse_genomes_project 1 136830695 136833917 + Kdm5b protein_coding retained_intron MGP_WSBEiJ_T0021573.1 MGP_WSBEiJ_G0015923.1 mouse_genomes_project 1 136831613 136836017 + Kdm5b protein_coding retained_intron MGP_WSBEiJ_T0020392.1 MGP_WSBEiJ_G0015660.1 mouse_genomes_project 1 86531914 86533791 + B3gnt7 protein_coding retained_intron MGP_WSBEiJ_T0020393.1 MGP_WSBEiJ_G0015660.1 mouse_genomes_project 1 86532316 86536389 + MGP_WSBEiJ_P0020393 B3gnt7 protein_coding protein_coding MGP_WSBEiJ_T0020394.1 MGP_WSBEiJ_G0015660.1 mouse_genomes_project 1 86532614 86534933 + MGP_WSBEiJ_P0020394 B3gnt7 protein_coding protein_coding MGP_WSBEiJ_T0020401.1 MGP_WSBEiJ_G0015662.1 mouse_genomes_project 1 86623832 86625750 - MGP_WSBEiJ_P0020401 Nmur1 protein_coding protein_coding MGP_WSBEiJ_T0005744.1 MGP_WSBEiJ_G0004816.1 mouse_genomes_project 1 90852765 90856220 + Gm28723 lincRNA lincRNA MGP_WSBEiJ_T0011752.1 MGP_WSBEiJ_G0009882.1 mouse_genomes_project 1 32968690 32968919 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000559.1 MGP_WSBEiJ_G0000504.1 mouse_genomes_project 1 121073996 121074920 - TEC TEC MGP_WSBEiJ_T0022045.1 MGP_WSBEiJ_G0016018.1 mouse_genomes_project 1 158202981 158223395 - MGP_WSBEiJ_P0022045 Mr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022046.1 MGP_WSBEiJ_G0016018.1 mouse_genomes_project 1 158203581 158209735 - Mr1 protein_coding retained_intron MGP_WSBEiJ_T0022047.1 MGP_WSBEiJ_G0016018.1 mouse_genomes_project 1 158203585 158223374 - MGP_WSBEiJ_P0022047 Mr1 protein_coding protein_coding MGP_WSBEiJ_T0022048.1 MGP_WSBEiJ_G0016018.1 mouse_genomes_project 1 158204541 158223395 - MGP_WSBEiJ_P0022048 Mr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022049.1 MGP_WSBEiJ_G0016018.1 mouse_genomes_project 1 158211503 158223405 - Mr1 protein_coding retained_intron MGP_WSBEiJ_T0097247.1 MGP_WSBEiJ_G0035927.1 mouse_genomes_project 1 133406494 133408898 - Gm29488 sense_intronic sense_intronic MGP_WSBEiJ_T0000419.1 MGP_WSBEiJ_G0000364.1 mouse_genomes_project 1 35023748 35027285 - TEC TEC MGP_WSBEiJ_T0023272.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186191178 186328005 - MGP_WSBEiJ_P0023272 Enah protein_coding protein_coding MGP_WSBEiJ_T0023273.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186199133 186328179 - MGP_WSBEiJ_P0023273 Enah protein_coding protein_coding MGP_WSBEiJ_T0023274.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186199178 186328179 - MGP_WSBEiJ_P0023274 Enah protein_coding protein_coding MGP_WSBEiJ_T0023275.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186199178 186328179 - MGP_WSBEiJ_P0023275 Enah protein_coding protein_coding MGP_WSBEiJ_T0023276.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186200057 186203123 - Enah protein_coding retained_intron MGP_WSBEiJ_T0023277.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186200211 186201561 - Enah protein_coding retained_intron MGP_WSBEiJ_T0023278.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186200239 186322770 - MGP_WSBEiJ_P0023278 Enah protein_coding protein_coding MGP_WSBEiJ_T0023279.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186200246 186328005 - MGP_WSBEiJ_P0023279 Enah protein_coding protein_coding MGP_WSBEiJ_T0023280.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186200246 186328005 - MGP_WSBEiJ_P0023280 Enah protein_coding protein_coding MGP_WSBEiJ_T0023281.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186200246 186328005 - MGP_WSBEiJ_P0023281 Enah protein_coding protein_coding MGP_WSBEiJ_T0023282.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186200441 186212081 - Enah protein_coding retained_intron MGP_WSBEiJ_T0023283.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186205426 186207316 - Enah protein_coding retained_intron MGP_WSBEiJ_T0023284.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186215506 186219769 - MGP_WSBEiJ_P0023284 Enah protein_coding protein_coding MGP_WSBEiJ_T0023285.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186219203 186260639 - Enah protein_coding retained_intron MGP_WSBEiJ_T0023286.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186230538 186242000 - Enah protein_coding retained_intron MGP_WSBEiJ_T0023287.1 MGP_WSBEiJ_G0016295.1 mouse_genomes_project 1 186260237 186328020 - Enah protein_coding retained_intron MGP_WSBEiJ_T0097515.1 MGP_WSBEiJ_G0036178.1 mouse_genomes_project 1 832838 832896 - Gm27396 snRNA snRNA MGP_WSBEiJ_T0100389.1 MGP_WSBEiJ_G0038848.1 mouse_genomes_project 1 50909506 50910394 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011789.1 MGP_WSBEiJ_G0009919.1 mouse_genomes_project 1 47357989 47360506 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000378.1 MGP_WSBEiJ_G0000324.1 mouse_genomes_project 1 22802119 22803150 - TEC TEC MGP_WSBEiJ_T0000505.1 MGP_WSBEiJ_G0000450.1 mouse_genomes_project 1 81579961 81581965 - TEC TEC MGP_WSBEiJ_T0016378.1 MGP_WSBEiJ_G0014507.1 mouse_genomes_project 1 6672497 6750126 - 2610203C22Rik processed_transcript antisense MGP_WSBEiJ_T0016379.1 MGP_WSBEiJ_G0014507.1 mouse_genomes_project 1 6676021 6750171 - 2610203C22Rik processed_transcript retained_intron MGP_WSBEiJ_T0016380.1 MGP_WSBEiJ_G0014507.1 mouse_genomes_project 1 6716831 6750178 - 2610203C22Rik processed_transcript antisense MGP_WSBEiJ_T0016381.1 MGP_WSBEiJ_G0014507.1 mouse_genomes_project 1 6717436 6750209 - 2610203C22Rik processed_transcript antisense MGP_WSBEiJ_T0016382.1 MGP_WSBEiJ_G0014507.1 mouse_genomes_project 1 6719861 6750198 - 2610203C22Rik processed_transcript antisense MGP_WSBEiJ_T0011930.1 MGP_WSBEiJ_G0010060.1 mouse_genomes_project 1 102903147 102903383 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098767.1 MGP_WSBEiJ_G0037430.1 mouse_genomes_project 1 79486028 79486154 - Gm24160 snoRNA snoRNA MGP_WSBEiJ_T0005785.1 MGP_WSBEiJ_G0004851.1 mouse_genomes_project 1 120476215 120478653 + lincRNA lincRNA MGP_WSBEiJ_T0011059.1 MGP_WSBEiJ_G0009216.1 mouse_genomes_project 1 98850852 98851164 + Gm25413 misc_RNA misc_RNA MGP_WSBEiJ_T0012015.1 MGP_WSBEiJ_G0010145.1 mouse_genomes_project 1 141108365 141108687 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021154.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127636866 128590378 - MGP_WSBEiJ_P0021154 Nckap5 protein_coding protein_coding MGP_WSBEiJ_T0021155.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127636866 128590378 - MGP_WSBEiJ_P0021155 Nckap5 protein_coding protein_coding MGP_WSBEiJ_T0021156.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127636877 128237665 - MGP_WSBEiJ_P0021156 Nckap5 protein_coding protein_coding MGP_WSBEiJ_T0021157.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127637549 127689557 - Nckap5 protein_coding processed_transcript MGP_WSBEiJ_T0021158.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127637972 128194943 - MGP_WSBEiJ_P0021158 Nckap5 protein_coding protein_coding MGP_WSBEiJ_T0021159.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127637972 128191853 - MGP_WSBEiJ_P0021159 Nckap5 protein_coding protein_coding MGP_WSBEiJ_T0021160.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127638189 127750894 - MGP_WSBEiJ_P0021160 Nckap5 protein_coding protein_coding MGP_WSBEiJ_T0021161.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127755661 127763639 - Nckap5 protein_coding processed_transcript MGP_WSBEiJ_T0021162.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127960899 128590545 - MGP_WSBEiJ_P0021162 Nckap5 protein_coding protein_coding MGP_WSBEiJ_T0021163.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 127996318 128484776 - MGP_WSBEiJ_P0021163 Nckap5 protein_coding protein_coding MGP_WSBEiJ_T0021164.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 128269976 128484764 - Nckap5 protein_coding retained_intron MGP_WSBEiJ_T0021165.1 MGP_WSBEiJ_G0015830.1 mouse_genomes_project 1 128273790 128590227 - Nckap5 protein_coding retained_intron MGP_WSBEiJ_T0018159.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3536297 3898248 + MGP_WSBEiJ_P0018159 St18 protein_coding protein_coding MGP_WSBEiJ_T0018160.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3536397 3898254 + MGP_WSBEiJ_P0018160 St18 protein_coding protein_coding MGP_WSBEiJ_T0018161.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3765957 3898254 + MGP_WSBEiJ_P0018161 St18 protein_coding protein_coding MGP_WSBEiJ_T0018162.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3765959 3832408 + MGP_WSBEiJ_P0018162 St18 protein_coding protein_coding MGP_WSBEiJ_T0018163.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3765976 3832533 + MGP_WSBEiJ_P0018163 St18 protein_coding protein_coding MGP_WSBEiJ_T0018164.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3766007 3896786 + MGP_WSBEiJ_P0018164 St18 protein_coding protein_coding MGP_WSBEiJ_T0018165.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3766008 3896137 + MGP_WSBEiJ_P0018165 St18 protein_coding protein_coding MGP_WSBEiJ_T0018166.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3770782 3839868 + MGP_WSBEiJ_P0018166 St18 protein_coding protein_coding MGP_WSBEiJ_T0018167.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3773466 3898254 + MGP_WSBEiJ_P0018167 St18 protein_coding protein_coding MGP_WSBEiJ_T0018168.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3839970 3847449 + MGP_WSBEiJ_P0018168 St18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018169.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3855733 3871586 + St18 protein_coding processed_transcript MGP_WSBEiJ_T0018170.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3865856 3886319 + St18 protein_coding processed_transcript MGP_WSBEiJ_T0018171.1 MGP_WSBEiJ_G0015236.1 mouse_genomes_project 1 3894676 3896920 + MGP_WSBEiJ_P0018171 St18 protein_coding protein_coding MGP_WSBEiJ_T0021175.1 MGP_WSBEiJ_G0015833.1 mouse_genomes_project 1 129517861 129557185 + MGP_WSBEiJ_P0021175 Acmsd protein_coding protein_coding MGP_WSBEiJ_T0021176.1 MGP_WSBEiJ_G0015833.1 mouse_genomes_project 1 129542735 129557185 + Acmsd protein_coding processed_transcript MGP_WSBEiJ_T0011829.1 MGP_WSBEiJ_G0009959.1 mouse_genomes_project 1 58259223 58260606 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005667.1 MGP_WSBEiJ_G0004756.1 mouse_genomes_project 1 60674900 60700406 + Gm11588 lincRNA lincRNA MGP_WSBEiJ_T0022776.1 MGP_WSBEiJ_G0016163.1 mouse_genomes_project 1 174994663 175002136 - Nit1 protein_coding retained_intron MGP_WSBEiJ_T0022777.1 MGP_WSBEiJ_G0016163.1 mouse_genomes_project 1 174994663 175002282 - MGP_WSBEiJ_P0022777 Nit1 protein_coding protein_coding MGP_WSBEiJ_T0022778.1 MGP_WSBEiJ_G0016163.1 mouse_genomes_project 1 174997222 175002300 - MGP_WSBEiJ_P0022778 Nit1 protein_coding protein_coding MGP_WSBEiJ_T0022779.1 MGP_WSBEiJ_G0016163.1 mouse_genomes_project 1 174997979 175002294 - Nit1 protein_coding retained_intron MGP_WSBEiJ_T0022780.1 MGP_WSBEiJ_G0016163.1 mouse_genomes_project 1 174998890 175002299 - MGP_WSBEiJ_P0022780 Nit1 protein_coding protein_coding MGP_WSBEiJ_T0022781.1 MGP_WSBEiJ_G0016163.1 mouse_genomes_project 1 175000423 175002279 - MGP_WSBEiJ_P0022781 Nit1 protein_coding protein_coding MGP_WSBEiJ_T0022782.1 MGP_WSBEiJ_G0016163.1 mouse_genomes_project 1 175000478 175001119 - Nit1 protein_coding retained_intron MGP_WSBEiJ_T0022783.1 MGP_WSBEiJ_G0016163.1 mouse_genomes_project 1 175000795 175002299 - MGP_WSBEiJ_P0022783 Nit1 protein_coding protein_coding MGP_WSBEiJ_T0022267.1 MGP_WSBEiJ_G0016053.1 mouse_genomes_project 1 164335921 164339119 + Serpinc1 protein_coding retained_intron MGP_WSBEiJ_T0022268.1 MGP_WSBEiJ_G0016053.1 mouse_genomes_project 1 164335942 164356880 + MGP_WSBEiJ_P0022268 Serpinc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022269.1 MGP_WSBEiJ_G0016053.1 mouse_genomes_project 1 164336024 164346807 + MGP_WSBEiJ_P0022269 Serpinc1 protein_coding protein_coding MGP_WSBEiJ_T0022270.1 MGP_WSBEiJ_G0016053.1 mouse_genomes_project 1 164341968 164356909 + MGP_WSBEiJ_P0022270 Serpinc1 protein_coding protein_coding MGP_WSBEiJ_T0022271.1 MGP_WSBEiJ_G0016053.1 mouse_genomes_project 1 164344235 164346897 + Serpinc1 protein_coding retained_intron MGP_WSBEiJ_T0022272.1 MGP_WSBEiJ_G0016053.1 mouse_genomes_project 1 164344691 164368301 + MGP_WSBEiJ_P0022272 Serpinc1 protein_coding protein_coding MGP_WSBEiJ_T0022273.1 MGP_WSBEiJ_G0016053.1 mouse_genomes_project 1 164346525 164363803 + MGP_WSBEiJ_P0022273 Serpinc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019302.1 MGP_WSBEiJ_G0015461.1 mouse_genomes_project 1 57106194 57108077 + Aox3 protein_coding retained_intron MGP_WSBEiJ_T0019303.1 MGP_WSBEiJ_G0015461.1 mouse_genomes_project 1 57106200 57191560 + MGP_WSBEiJ_P0019303 Aox3 protein_coding protein_coding MGP_WSBEiJ_T0019304.1 MGP_WSBEiJ_G0015461.1 mouse_genomes_project 1 57106202 57115456 + Aox3 protein_coding retained_intron MGP_WSBEiJ_T0019305.1 MGP_WSBEiJ_G0015461.1 mouse_genomes_project 1 57106250 57129794 + MGP_WSBEiJ_P0019305 Aox3 protein_coding protein_coding MGP_WSBEiJ_T0019306.1 MGP_WSBEiJ_G0015461.1 mouse_genomes_project 1 57160750 57163375 + Aox3 protein_coding retained_intron MGP_WSBEiJ_T0011924.1 MGP_WSBEiJ_G0010054.1 mouse_genomes_project 1 101603028 101603581 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011986.1 MGP_WSBEiJ_G0010116.1 mouse_genomes_project 1 123501669 123502979 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002794.1 MGP_WSBEiJ_G0002650.1 mouse_genomes_project 1 97742608 97779415 + Panct2 antisense antisense MGP_WSBEiJ_T0002795.1 MGP_WSBEiJ_G0002650.1 mouse_genomes_project 1 97743703 97752714 + Panct2 antisense antisense MGP_WSBEiJ_T0002796.1 MGP_WSBEiJ_G0002650.1 mouse_genomes_project 1 97743715 97749381 + Panct2 antisense antisense MGP_WSBEiJ_T0022402.1 MGP_WSBEiJ_G0016077.1 mouse_genomes_project 1 166423728 166486023 - MGP_WSBEiJ_P0022402 Mroh9 protein_coding protein_coding MGP_WSBEiJ_T0097530.1 MGP_WSBEiJ_G0036193.1 mouse_genomes_project 1 31226658 31226758 + Gm25792 snRNA snRNA MGP_WSBEiJ_T0011835.1 MGP_WSBEiJ_G0009965.1 mouse_genomes_project 1 59896008 59897074 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009402.1 MGP_WSBEiJ_G0007559.1 mouse_genomes_project 1 170772897 170772998 + Mir6347 miRNA miRNA MGP_WSBEiJ_T0000687.1 MGP_WSBEiJ_G0000630.1 mouse_genomes_project 1 164265370 164266291 + TEC TEC MGP_WSBEiJ_T0012001.1 MGP_WSBEiJ_G0010131.1 mouse_genomes_project 1 130597941 130598363 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000715.1 MGP_WSBEiJ_G0000658.1 mouse_genomes_project 1 179997481 179999095 - TEC TEC MGP_WSBEiJ_T0098733.1 MGP_WSBEiJ_G0037396.1 mouse_genomes_project 1 12998593 12998725 + Gm25168 snoRNA snoRNA MGP_WSBEiJ_T0097583.1 MGP_WSBEiJ_G0036246.1 mouse_genomes_project 1 152510310 152516007 - Gm23535 snRNA snRNA MGP_WSBEiJ_T0002916.1 MGP_WSBEiJ_G0002744.1 mouse_genomes_project 1 194437633 194442323 + Gm37422 antisense antisense MGP_WSBEiJ_T0011742.1 MGP_WSBEiJ_G0009872.1 mouse_genomes_project 1 32326404 32328037 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016484.1 MGP_WSBEiJ_G0014539.1 mouse_genomes_project 1 169284331 169293595 + Gm16565 processed_transcript sense_overlapping MGP_WSBEiJ_T0016485.1 MGP_WSBEiJ_G0014539.1 mouse_genomes_project 1 169284455 169285424 + Gm16565 processed_transcript processed_transcript MGP_WSBEiJ_T0011758.1 MGP_WSBEiJ_G0009888.1 mouse_genomes_project 1 36921660 36922162 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005718.1 MGP_WSBEiJ_G0004794.1 mouse_genomes_project 1 78770578 79216569 - lincRNA lincRNA MGP_WSBEiJ_T0011698.1 MGP_WSBEiJ_G0009828.1 mouse_genomes_project 1 15588933 15589918 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097568.1 MGP_WSBEiJ_G0036231.1 mouse_genomes_project 1 126155143 126155247 + Gm25578 snRNA snRNA MGP_WSBEiJ_T0099985.1 MGP_WSBEiJ_G0038637.1 mouse_genomes_project 1 189833970 189845884 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099986.1 MGP_WSBEiJ_G0038637.1 mouse_genomes_project 1 189845107 189845743 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0021985.1 MGP_WSBEiJ_G0016004.1 mouse_genomes_project 1 156189248 156308480 - MGP_WSBEiJ_P0021985 Lamc1 protein_coding protein_coding MGP_WSBEiJ_T0021986.1 MGP_WSBEiJ_G0016004.1 mouse_genomes_project 1 156189248 156199483 - MGP_WSBEiJ_P0021986 Lamc1 protein_coding protein_coding MGP_WSBEiJ_T0021987.1 MGP_WSBEiJ_G0016004.1 mouse_genomes_project 1 156199099 156199757 - Lamc1 protein_coding retained_intron MGP_WSBEiJ_T0021988.1 MGP_WSBEiJ_G0016004.1 mouse_genomes_project 1 156199153 156209838 - MGP_WSBEiJ_P0021988 Lamc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021989.1 MGP_WSBEiJ_G0016004.1 mouse_genomes_project 1 156219151 156220994 - Lamc1 protein_coding retained_intron MGP_WSBEiJ_T0019512.1 MGP_WSBEiJ_G0015496.1 mouse_genomes_project 1 60180984 60199841 + MGP_WSBEiJ_P0019512 Icos protein_coding protein_coding MGP_WSBEiJ_T0019513.1 MGP_WSBEiJ_G0015496.1 mouse_genomes_project 1 60180984 60205703 + MGP_WSBEiJ_P0019513 Icos protein_coding protein_coding MGP_WSBEiJ_T0020235.1 MGP_WSBEiJ_G0015630.1 mouse_genomes_project 1 82542270 82691630 - MGP_WSBEiJ_P0020235 Col4a4 protein_coding protein_coding MGP_WSBEiJ_T0020236.1 MGP_WSBEiJ_G0015630.1 mouse_genomes_project 1 82550849 82691461 - MGP_WSBEiJ_P0020236 Col4a4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020237.1 MGP_WSBEiJ_G0015630.1 mouse_genomes_project 1 82638422 82691573 - Col4a4 protein_coding retained_intron MGP_WSBEiJ_T0002923.1 MGP_WSBEiJ_G0002750.1 mouse_genomes_project 1 196586701 196601509 - 1700034H15Rik antisense antisense MGP_WSBEiJ_T0002924.1 MGP_WSBEiJ_G0002750.1 mouse_genomes_project 1 196590881 196599752 - 1700034H15Rik antisense antisense MGP_WSBEiJ_T0002925.1 MGP_WSBEiJ_G0002750.1 mouse_genomes_project 1 196590883 196599879 - 1700034H15Rik antisense antisense MGP_WSBEiJ_T0002926.1 MGP_WSBEiJ_G0002750.1 mouse_genomes_project 1 196591072 196602344 - 1700034H15Rik antisense antisense MGP_WSBEiJ_T0002927.1 MGP_WSBEiJ_G0002750.1 mouse_genomes_project 1 196594756 196608153 - 1700034H15Rik antisense antisense MGP_WSBEiJ_T0002928.1 MGP_WSBEiJ_G0002750.1 mouse_genomes_project 1 196600592 196608161 - 1700034H15Rik antisense antisense MGP_WSBEiJ_T0011893.1 MGP_WSBEiJ_G0010023.1 mouse_genomes_project 1 83151481 83152111 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016411.1 MGP_WSBEiJ_G0014521.1 mouse_genomes_project 1 75003591 75018177 - Gm29253 processed_transcript processed_transcript MGP_WSBEiJ_T0000718.1 MGP_WSBEiJ_G0000661.1 mouse_genomes_project 1 180729358 180730777 - TEC TEC MGP_WSBEiJ_T0023130.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183899477 183961090 - MGP_WSBEiJ_P0023130 Ahctf1 protein_coding protein_coding MGP_WSBEiJ_T0023131.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183899920 183907015 - MGP_WSBEiJ_P0023131 Ahctf1 protein_coding protein_coding MGP_WSBEiJ_T0023132.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183900674 183908180 - Ahctf1 protein_coding retained_intron MGP_WSBEiJ_T0023133.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183908298 183912588 - MGP_WSBEiJ_P0023133 Ahctf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023134.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183914861 183920419 - MGP_WSBEiJ_P0023134 Ahctf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023135.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183922815 183925438 - MGP_WSBEiJ_P0023135 Ahctf1 protein_coding protein_coding MGP_WSBEiJ_T0023136.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183947189 183950343 - Ahctf1 protein_coding retained_intron MGP_WSBEiJ_T0023137.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183956107 183959483 - Ahctf1 protein_coding retained_intron MGP_WSBEiJ_T0023138.1 MGP_WSBEiJ_G0016269.1 mouse_genomes_project 1 183956113 183961016 - Ahctf1 protein_coding retained_intron MGP_WSBEiJ_T0020158.1 MGP_WSBEiJ_G0015611.1 mouse_genomes_project 1 78043351 78143286 - MGP_WSBEiJ_P0020158 Pax3 protein_coding protein_coding MGP_WSBEiJ_T0020159.1 MGP_WSBEiJ_G0015611.1 mouse_genomes_project 1 78043354 78143582 - MGP_WSBEiJ_P0020159 Pax3 protein_coding protein_coding MGP_WSBEiJ_T0020160.1 MGP_WSBEiJ_G0015611.1 mouse_genomes_project 1 78129887 78143561 - Pax3 protein_coding processed_transcript MGP_WSBEiJ_T0100385.1 MGP_WSBEiJ_G0038844.1 mouse_genomes_project 1 18709623 18714314 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011784.1 MGP_WSBEiJ_G0009914.1 mouse_genomes_project 1 44522573 44523647 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018699.1 MGP_WSBEiJ_G0015343.1 mouse_genomes_project 1 34627941 34762223 - MGP_WSBEiJ_P0018699 Fam178b protein_coding protein_coding MGP_WSBEiJ_T0018700.1 MGP_WSBEiJ_G0015343.1 mouse_genomes_project 1 34627945 34658844 - Fam178b protein_coding processed_transcript MGP_WSBEiJ_T0018701.1 MGP_WSBEiJ_G0015343.1 mouse_genomes_project 1 34627945 34654822 - Fam178b protein_coding processed_transcript MGP_WSBEiJ_T0018702.1 MGP_WSBEiJ_G0015343.1 mouse_genomes_project 1 34627945 34667468 - MGP_WSBEiJ_P0018702 Fam178b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018703.1 MGP_WSBEiJ_G0015343.1 mouse_genomes_project 1 34629577 34668011 - MGP_WSBEiJ_P0018703 Fam178b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018704.1 MGP_WSBEiJ_G0015343.1 mouse_genomes_project 1 34630113 34653191 - Fam178b protein_coding processed_transcript MGP_WSBEiJ_T0018705.1 MGP_WSBEiJ_G0015343.1 mouse_genomes_project 1 34641621 34667489 - Fam178b protein_coding processed_transcript MGP_WSBEiJ_T0018706.1 MGP_WSBEiJ_G0015343.1 mouse_genomes_project 1 34667032 34762223 - MGP_WSBEiJ_P0018706 Fam178b protein_coding protein_coding MGP_WSBEiJ_T0000602.1 MGP_WSBEiJ_G0000547.1 mouse_genomes_project 1 135209124 135212231 - TEC TEC MGP_WSBEiJ_T0000603.1 MGP_WSBEiJ_G0000547.1 mouse_genomes_project 1 135211628 135212231 - TEC TEC MGP_WSBEiJ_T0018840.1 MGP_WSBEiJ_G0015366.1 mouse_genomes_project 1 37066919 37102033 - MGP_WSBEiJ_P0018840 Chst10 protein_coding protein_coding MGP_WSBEiJ_T0018841.1 MGP_WSBEiJ_G0015366.1 mouse_genomes_project 1 37066919 37102112 - MGP_WSBEiJ_P0018841 Chst10 protein_coding protein_coding MGP_WSBEiJ_T0018842.1 MGP_WSBEiJ_G0015366.1 mouse_genomes_project 1 37066927 37075456 - MGP_WSBEiJ_P0018842 Chst10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018843.1 MGP_WSBEiJ_G0015366.1 mouse_genomes_project 1 37066929 37102184 - MGP_WSBEiJ_P0018843 Chst10 protein_coding protein_coding MGP_WSBEiJ_T0018844.1 MGP_WSBEiJ_G0015366.1 mouse_genomes_project 1 37073838 37102176 - MGP_WSBEiJ_P0018844 Chst10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018845.1 MGP_WSBEiJ_G0015366.1 mouse_genomes_project 1 37077644 37102157 - MGP_WSBEiJ_P0018845 Chst10 protein_coding protein_coding MGP_WSBEiJ_T0018846.1 MGP_WSBEiJ_G0015366.1 mouse_genomes_project 1 37094654 37102009 - Chst10 protein_coding retained_intron MGP_WSBEiJ_T0018847.1 MGP_WSBEiJ_G0015366.1 mouse_genomes_project 1 37094655 37102033 - Chst10 protein_coding retained_intron MGP_WSBEiJ_T0021345.1 MGP_WSBEiJ_G0015874.1 mouse_genomes_project 1 133978221 133999497 + MGP_WSBEiJ_P0021345 Slc45a3 protein_coding protein_coding MGP_WSBEiJ_T0021346.1 MGP_WSBEiJ_G0015874.1 mouse_genomes_project 1 133987138 133999492 + MGP_WSBEiJ_P0021346 Slc45a3 protein_coding protein_coding MGP_WSBEiJ_T0021347.1 MGP_WSBEiJ_G0015874.1 mouse_genomes_project 1 133993249 133994476 + MGP_WSBEiJ_P0021347 Slc45a3 protein_coding protein_coding MGP_WSBEiJ_T0021348.1 MGP_WSBEiJ_G0015874.1 mouse_genomes_project 1 133995494 133998434 + Slc45a3 protein_coding processed_transcript MGP_WSBEiJ_T0005789.1 MGP_WSBEiJ_G0004854.1 mouse_genomes_project 1 120973070 120980091 - 3830432H09Rik lincRNA lincRNA MGP_WSBEiJ_T0005790.1 MGP_WSBEiJ_G0004854.1 mouse_genomes_project 1 120973883 120979169 - 3830432H09Rik lincRNA lincRNA MGP_WSBEiJ_T0011691.1 MGP_WSBEiJ_G0009821.1 mouse_genomes_project 1 14010449 14010868 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011916.1 MGP_WSBEiJ_G0010046.1 mouse_genomes_project 1 96340728 96341204 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023344.1 MGP_WSBEiJ_G0016309.1 mouse_genomes_project 1 187636712 187656932 - MGP_WSBEiJ_P0023344 protein_coding protein_coding MGP_WSBEiJ_T0023345.1 MGP_WSBEiJ_G0016309.1 mouse_genomes_project 1 187636809 187682308 - MGP_WSBEiJ_P0023345 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023346.1 MGP_WSBEiJ_G0016309.1 mouse_genomes_project 1 187636814 187644583 - MGP_WSBEiJ_P0023346 protein_coding protein_coding MGP_WSBEiJ_T0023347.1 MGP_WSBEiJ_G0016309.1 mouse_genomes_project 1 187645583 187650439 - MGP_WSBEiJ_P0023347 protein_coding protein_coding MGP_WSBEiJ_T0023348.1 MGP_WSBEiJ_G0016309.1 mouse_genomes_project 1 187655367 187662744 - protein_coding retained_intron MGP_WSBEiJ_T0023349.1 MGP_WSBEiJ_G0016309.1 mouse_genomes_project 1 187655863 187662722 - MGP_WSBEiJ_P0023349 protein_coding protein_coding MGP_WSBEiJ_T0023350.1 MGP_WSBEiJ_G0016309.1 mouse_genomes_project 1 187670053 187682332 - MGP_WSBEiJ_P0023350 protein_coding protein_coding MGP_WSBEiJ_T0022681.1 MGP_WSBEiJ_G0016148.1 mouse_genomes_project 1 174761344 174776613 + MGP_WSBEiJ_P0022681 Cfap126 protein_coding protein_coding MGP_WSBEiJ_T0022682.1 MGP_WSBEiJ_G0016148.1 mouse_genomes_project 1 174761415 174776563 + MGP_WSBEiJ_P0022682 Cfap126 protein_coding protein_coding MGP_WSBEiJ_T0022683.1 MGP_WSBEiJ_G0016148.1 mouse_genomes_project 1 174771377 174776751 + MGP_WSBEiJ_P0022683 Cfap126 protein_coding protein_coding MGP_WSBEiJ_T0022684.1 MGP_WSBEiJ_G0016148.1 mouse_genomes_project 1 174771380 174772854 + Cfap126 protein_coding processed_transcript MGP_WSBEiJ_T0022685.1 MGP_WSBEiJ_G0016148.1 mouse_genomes_project 1 174772375 174775822 + MGP_WSBEiJ_P0022685 Cfap126 protein_coding protein_coding MGP_WSBEiJ_T0022686.1 MGP_WSBEiJ_G0016148.1 mouse_genomes_project 1 174772847 174776726 + MGP_WSBEiJ_P0022686 Cfap126 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022687.1 MGP_WSBEiJ_G0016148.1 mouse_genomes_project 1 174772871 174775866 + MGP_WSBEiJ_P0022687 Cfap126 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022688.1 MGP_WSBEiJ_G0016148.1 mouse_genomes_project 1 174774842 174776443 + MGP_WSBEiJ_P0022688 Cfap126 protein_coding protein_coding MGP_WSBEiJ_T0020208.1 MGP_WSBEiJ_G0015624.1 mouse_genomes_project 1 80245878 80324778 - MGP_WSBEiJ_P0020208 Cul3 protein_coding protein_coding MGP_WSBEiJ_T0020209.1 MGP_WSBEiJ_G0015624.1 mouse_genomes_project 1 80247777 80324609 - MGP_WSBEiJ_P0020209 Cul3 protein_coding protein_coding MGP_WSBEiJ_T0020210.1 MGP_WSBEiJ_G0015624.1 mouse_genomes_project 1 80247901 80258403 - MGP_WSBEiJ_P0020210 Cul3 protein_coding protein_coding MGP_WSBEiJ_T0020211.1 MGP_WSBEiJ_G0015624.1 mouse_genomes_project 1 80248196 80257527 - Cul3 protein_coding retained_intron MGP_WSBEiJ_T0020212.1 MGP_WSBEiJ_G0015624.1 mouse_genomes_project 1 80269127 80324605 - MGP_WSBEiJ_P0020212 Cul3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020213.1 MGP_WSBEiJ_G0015624.1 mouse_genomes_project 1 80270937 80324577 - MGP_WSBEiJ_P0020213 Cul3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022029.1 MGP_WSBEiJ_G0016013.1 mouse_genomes_project 1 156909679 156913224 + MGP_WSBEiJ_P0022029 Teddm1b protein_coding protein_coding MGP_WSBEiJ_T0100443.1 MGP_WSBEiJ_G0038902.1 mouse_genomes_project 1 185245556 185245667 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0018776.1 MGP_WSBEiJ_G0015354.1 mouse_genomes_project 1 35760616 35774075 - MGP_WSBEiJ_P0018776 2010300C02Rik protein_coding protein_coding MGP_WSBEiJ_T0018777.1 MGP_WSBEiJ_G0015354.1 mouse_genomes_project 1 35760616 35871860 - MGP_WSBEiJ_P0018777 2010300C02Rik protein_coding protein_coding MGP_WSBEiJ_T0018778.1 MGP_WSBEiJ_G0015354.1 mouse_genomes_project 1 35788063 35871570 - MGP_WSBEiJ_P0018778 2010300C02Rik protein_coding protein_coding MGP_WSBEiJ_T0097590.1 MGP_WSBEiJ_G0036253.1 mouse_genomes_project 1 174470442 174470549 - Gm25235 snRNA snRNA MGP_WSBEiJ_T0011883.1 MGP_WSBEiJ_G0010013.1 mouse_genomes_project 1 78760150 78762295 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018539.1 MGP_WSBEiJ_G0015315.1 mouse_genomes_project 1 31373121 31590610 - MGP_WSBEiJ_P0018539 Prim2 protein_coding protein_coding MGP_WSBEiJ_T0018540.1 MGP_WSBEiJ_G0015315.1 mouse_genomes_project 1 31398027 31465038 - Prim2 protein_coding retained_intron MGP_WSBEiJ_T0005825.1 MGP_WSBEiJ_G0004884.1 mouse_genomes_project 1 138575197 138578379 - Gm37552 lincRNA lincRNA MGP_WSBEiJ_T0022074.1 MGP_WSBEiJ_G0016022.1 mouse_genomes_project 1 158658740 158672715 + MGP_WSBEiJ_P0022074 Acbd6 protein_coding protein_coding MGP_WSBEiJ_T0022075.1 MGP_WSBEiJ_G0016022.1 mouse_genomes_project 1 158658742 158801648 + MGP_WSBEiJ_P0022075 Acbd6 protein_coding protein_coding MGP_WSBEiJ_T0022076.1 MGP_WSBEiJ_G0016022.1 mouse_genomes_project 1 158658746 158689386 + MGP_WSBEiJ_P0022076 Acbd6 protein_coding protein_coding MGP_WSBEiJ_T0022077.1 MGP_WSBEiJ_G0016022.1 mouse_genomes_project 1 158663776 158796725 + Acbd6 protein_coding processed_transcript MGP_WSBEiJ_T0022078.1 MGP_WSBEiJ_G0016022.1 mouse_genomes_project 1 158667887 158672686 + Acbd6 protein_coding retained_intron MGP_WSBEiJ_T0022079.1 MGP_WSBEiJ_G0016022.1 mouse_genomes_project 1 158796620 158798689 + MGP_WSBEiJ_P0022079 Acbd6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012034.1 MGP_WSBEiJ_G0010164.1 mouse_genomes_project 1 150767139 150767598 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018339.1 MGP_WSBEiJ_G0015265.1 mouse_genomes_project 1 13052150 13090702 + MGP_WSBEiJ_P0018339 Terf1 protein_coding protein_coding MGP_WSBEiJ_T0018340.1 MGP_WSBEiJ_G0015265.1 mouse_genomes_project 1 13052161 13069476 + Terf1 protein_coding processed_transcript MGP_WSBEiJ_T0018341.1 MGP_WSBEiJ_G0015265.1 mouse_genomes_project 1 13052168 13090122 + MGP_WSBEiJ_P0018341 Terf1 protein_coding protein_coding MGP_WSBEiJ_T0018342.1 MGP_WSBEiJ_G0015265.1 mouse_genomes_project 1 13059404 13069565 + Terf1 protein_coding retained_intron MGP_WSBEiJ_T0021564.1 MGP_WSBEiJ_G0015922.1 mouse_genomes_project 1 136735023 136743845 - MGP_WSBEiJ_P0021564 Mgat4e protein_coding protein_coding MGP_WSBEiJ_T0021565.1 MGP_WSBEiJ_G0015922.1 mouse_genomes_project 1 136735029 136741093 - MGP_WSBEiJ_P0021565 Mgat4e protein_coding protein_coding MGP_WSBEiJ_T0021566.1 MGP_WSBEiJ_G0015922.1 mouse_genomes_project 1 136735039 136741021 - MGP_WSBEiJ_P0021566 Mgat4e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022274.1 MGP_WSBEiJ_G0016054.1 mouse_genomes_project 1 164364255 164395559 - MGP_WSBEiJ_P0022274 Zbtb37 protein_coding protein_coding MGP_WSBEiJ_T0022275.1 MGP_WSBEiJ_G0016054.1 mouse_genomes_project 1 164370127 164395559 - MGP_WSBEiJ_P0022275 Zbtb37 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022276.1 MGP_WSBEiJ_G0016054.1 mouse_genomes_project 1 164370133 164395544 - MGP_WSBEiJ_P0022276 Zbtb37 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022277.1 MGP_WSBEiJ_G0016054.1 mouse_genomes_project 1 164379090 164394971 - MGP_WSBEiJ_P0022277 Zbtb37 protein_coding protein_coding MGP_WSBEiJ_T0022278.1 MGP_WSBEiJ_G0016054.1 mouse_genomes_project 1 164380593 164395558 - MGP_WSBEiJ_P0022278 Zbtb37 protein_coding protein_coding MGP_WSBEiJ_T0022279.1 MGP_WSBEiJ_G0016054.1 mouse_genomes_project 1 164380757 164394996 - MGP_WSBEiJ_P0022279 Zbtb37 protein_coding protein_coding MGP_WSBEiJ_T0022280.1 MGP_WSBEiJ_G0016054.1 mouse_genomes_project 1 164393147 164395526 - MGP_WSBEiJ_P0022280 Zbtb37 protein_coding protein_coding MGP_WSBEiJ_T0019869.1 MGP_WSBEiJ_G0015568.1 mouse_genomes_project 1 74362886 74387554 + MGP_WSBEiJ_P0019869 Cnot9 protein_coding protein_coding MGP_WSBEiJ_T0019870.1 MGP_WSBEiJ_G0015568.1 mouse_genomes_project 1 74362888 74383797 + Cnot9 protein_coding processed_transcript MGP_WSBEiJ_T0019871.1 MGP_WSBEiJ_G0015568.1 mouse_genomes_project 1 74380232 74384890 + Cnot9 protein_coding retained_intron MGP_WSBEiJ_T0018443.1 MGP_WSBEiJ_G0015293.1 mouse_genomes_project 1 18756901 18771245 + MGP_WSBEiJ_P0018443 protein_coding protein_coding MGP_WSBEiJ_T0009351.1 MGP_WSBEiJ_G0007508.1 mouse_genomes_project 1 67094675 67094753 + Gm22548 miRNA miRNA MGP_WSBEiJ_T0000428.1 MGP_WSBEiJ_G0000373.1 mouse_genomes_project 1 38325564 38326894 - TEC TEC MGP_WSBEiJ_T0012104.1 MGP_WSBEiJ_G0010234.1 mouse_genomes_project 1 180619762 180621132 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012045.1 MGP_WSBEiJ_G0010175.1 mouse_genomes_project 1 153394361 153394721 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000682.1 MGP_WSBEiJ_G0000625.1 mouse_genomes_project 1 163943731 163947227 - TEC TEC MGP_WSBEiJ_T0000501.1 MGP_WSBEiJ_G0000446.1 mouse_genomes_project 1 80310481 80312303 - TEC TEC MGP_WSBEiJ_T0096879.1 MGP_WSBEiJ_G0035560.1 mouse_genomes_project 1 83370445 83370566 - n-R5s214 rRNA rRNA MGP_WSBEiJ_T0002768.1 MGP_WSBEiJ_G0002625.1 mouse_genomes_project 1 74652360 74654873 - Gm29539 antisense antisense MGP_WSBEiJ_T0000454.1 MGP_WSBEiJ_G0000399.1 mouse_genomes_project 1 59035312 59036030 - TEC TEC MGP_WSBEiJ_T0009347.1 MGP_WSBEiJ_G0007504.1 mouse_genomes_project 1 62489337 62489463 + Gm27512 miRNA miRNA MGP_WSBEiJ_T0021636.1 MGP_WSBEiJ_G0015937.1 mouse_genomes_project 1 137718315 137875327 - MGP_WSBEiJ_P0021636 Nav1 protein_coding protein_coding MGP_WSBEiJ_T0021637.1 MGP_WSBEiJ_G0015937.1 mouse_genomes_project 1 137718315 137874977 - MGP_WSBEiJ_P0021637 Nav1 protein_coding protein_coding MGP_WSBEiJ_T0021638.1 MGP_WSBEiJ_G0015937.1 mouse_genomes_project 1 137722596 137896825 - MGP_WSBEiJ_P0021638 Nav1 protein_coding protein_coding MGP_WSBEiJ_T0021639.1 MGP_WSBEiJ_G0015937.1 mouse_genomes_project 1 137735401 137736934 - Nav1 protein_coding retained_intron MGP_WSBEiJ_T0021640.1 MGP_WSBEiJ_G0015937.1 mouse_genomes_project 1 137738342 137752235 - MGP_WSBEiJ_P0021640 Nav1 protein_coding protein_coding MGP_WSBEiJ_T0021641.1 MGP_WSBEiJ_G0015937.1 mouse_genomes_project 1 137740797 137744265 - Nav1 protein_coding retained_intron MGP_WSBEiJ_T0021642.1 MGP_WSBEiJ_G0015937.1 mouse_genomes_project 1 137740797 137798721 - Nav1 protein_coding retained_intron MGP_WSBEiJ_T0021643.1 MGP_WSBEiJ_G0015937.1 mouse_genomes_project 1 137741680 137798788 - Nav1 protein_coding processed_transcript MGP_WSBEiJ_T0098799.1 MGP_WSBEiJ_G0037462.1 mouse_genomes_project 1 151120261 151120390 - Gm22966 snoRNA snoRNA MGP_WSBEiJ_T0011945.1 MGP_WSBEiJ_G0010075.1 mouse_genomes_project 1 109606784 109608057 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011666.1 MGP_WSBEiJ_G0009796.1 mouse_genomes_project 1 4675602 4675888 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012010.1 MGP_WSBEiJ_G0010140.1 mouse_genomes_project 1 138176410 138176779 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005717.1 MGP_WSBEiJ_G0004793.1 mouse_genomes_project 1 78584715 78589371 + Gm29611 lincRNA lincRNA MGP_WSBEiJ_T0005729.1 MGP_WSBEiJ_G0004802.1 mouse_genomes_project 1 86179610 86195738 - Gm28100 lincRNA lincRNA MGP_WSBEiJ_T0097607.1 MGP_WSBEiJ_G0036270.1 mouse_genomes_project 1 197419238 197419354 + Gm22265 snRNA snRNA MGP_WSBEiJ_T0020429.1 MGP_WSBEiJ_G0015671.1 mouse_genomes_project 1 87439496 87441672 + Akp3 protein_coding retained_intron MGP_WSBEiJ_T0020430.1 MGP_WSBEiJ_G0015671.1 mouse_genomes_project 1 87439531 87442424 + MGP_WSBEiJ_P0020430 Akp3 protein_coding protein_coding MGP_WSBEiJ_T0000345.1 MGP_WSBEiJ_G0000293.1 mouse_genomes_project 1 7586417 7589162 - TEC TEC MGP_WSBEiJ_T0000673.1 MGP_WSBEiJ_G0000616.1 mouse_genomes_project 1 161783051 161786152 - TEC TEC MGP_WSBEiJ_T0100400.1 MGP_WSBEiJ_G0038859.1 mouse_genomes_project 1 88500310 88500704 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002835.1 MGP_WSBEiJ_G0002678.1 mouse_genomes_project 1 140936414 140971866 + Gm28501 antisense antisense MGP_WSBEiJ_T0023189.1 MGP_WSBEiJ_G0016275.1 mouse_genomes_project 1 184613662 184671214 - MGP_WSBEiJ_P0023189 Stum protein_coding protein_coding MGP_WSBEiJ_T0023190.1 MGP_WSBEiJ_G0016275.1 mouse_genomes_project 1 184621166 184671251 - MGP_WSBEiJ_P0023190 Stum protein_coding protein_coding MGP_WSBEiJ_T0000727.1 MGP_WSBEiJ_G0000670.1 mouse_genomes_project 1 181226114 181226910 - TEC TEC MGP_WSBEiJ_T0020602.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91657081 91774083 + MGP_WSBEiJ_P0020602 Lrrfip1 protein_coding protein_coding MGP_WSBEiJ_T0020603.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91657121 91788793 + MGP_WSBEiJ_P0020603 Lrrfip1 protein_coding protein_coding MGP_WSBEiJ_T0020604.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91657123 91795264 + MGP_WSBEiJ_P0020604 Lrrfip1 protein_coding protein_coding MGP_WSBEiJ_T0020605.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91714716 91795268 + MGP_WSBEiJ_P0020605 Lrrfip1 protein_coding protein_coding MGP_WSBEiJ_T0020606.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91714726 91783527 + MGP_WSBEiJ_P0020606 Lrrfip1 protein_coding protein_coding MGP_WSBEiJ_T0020607.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91714775 91783532 + MGP_WSBEiJ_P0020607 Lrrfip1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020608.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91714779 91795242 + MGP_WSBEiJ_P0020608 Lrrfip1 protein_coding protein_coding MGP_WSBEiJ_T0020609.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91714779 91765973 + MGP_WSBEiJ_P0020609 Lrrfip1 protein_coding protein_coding MGP_WSBEiJ_T0020610.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91714858 91794614 + MGP_WSBEiJ_P0020610 Lrrfip1 protein_coding protein_coding MGP_WSBEiJ_T0020611.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91777435 91783133 + Lrrfip1 protein_coding processed_transcript MGP_WSBEiJ_T0020612.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91777449 91781064 + Lrrfip1 protein_coding processed_transcript MGP_WSBEiJ_T0020613.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91786188 91788779 + Lrrfip1 protein_coding processed_transcript MGP_WSBEiJ_T0020614.1 MGP_WSBEiJ_G0015709.1 mouse_genomes_project 1 91791640 91794505 + Lrrfip1 protein_coding retained_intron MGP_WSBEiJ_T0018352.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13473465 13766288 - MGP_WSBEiJ_P0018352 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018353.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13473592 13766210 - MGP_WSBEiJ_P0018353 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018354.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13473595 13766210 - MGP_WSBEiJ_P0018354 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018355.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13473601 13766288 - MGP_WSBEiJ_P0018355 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018356.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13473607 13767007 - MGP_WSBEiJ_P0018356 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018357.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13592468 13766176 - MGP_WSBEiJ_P0018357 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018358.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13593258 13625385 - Stau2 protein_coding processed_transcript MGP_WSBEiJ_T0018359.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13593351 13766222 - MGP_WSBEiJ_P0018359 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018360.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13593359 13766235 - MGP_WSBEiJ_P0018360 Stau2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018361.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13594758 13733477 - MGP_WSBEiJ_P0018361 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018362.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13643944 13766252 - MGP_WSBEiJ_P0018362 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018363.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13694618 13766975 - MGP_WSBEiJ_P0018363 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018364.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13711484 13766242 - MGP_WSBEiJ_P0018364 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018365.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13711873 13766916 - MGP_WSBEiJ_P0018365 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0018366.1 MGP_WSBEiJ_G0015270.1 mouse_genomes_project 1 13711982 13766915 - MGP_WSBEiJ_P0018366 Stau2 protein_coding protein_coding MGP_WSBEiJ_T0020551.1 MGP_WSBEiJ_G0015695.1 mouse_genomes_project 1 88876172 88904659 + MGP_WSBEiJ_P0020551 Spp2 protein_coding protein_coding MGP_WSBEiJ_T0020552.1 MGP_WSBEiJ_G0015695.1 mouse_genomes_project 1 88885659 88904655 + MGP_WSBEiJ_P0020552 Spp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100382.1 MGP_WSBEiJ_G0038841.1 mouse_genomes_project 1 15298422 15320479 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000529.1 MGP_WSBEiJ_G0000474.1 mouse_genomes_project 1 89145501 89147241 + TEC TEC MGP_WSBEiJ_T0011840.1 MGP_WSBEiJ_G0009970.1 mouse_genomes_project 1 60285367 60285931 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000703.1 MGP_WSBEiJ_G0000646.1 mouse_genomes_project 1 169351798 169352799 - TEC TEC MGP_WSBEiJ_T0016412.1 MGP_WSBEiJ_G0014522.1 mouse_genomes_project 1 82808995 82843172 - C430014B12Rik processed_transcript antisense MGP_WSBEiJ_T0016413.1 MGP_WSBEiJ_G0014522.1 mouse_genomes_project 1 82837246 82843224 - C430014B12Rik processed_transcript antisense MGP_WSBEiJ_T0016414.1 MGP_WSBEiJ_G0014522.1 mouse_genomes_project 1 82839078 82843202 - C430014B12Rik processed_transcript retained_intron MGP_WSBEiJ_T0000675.1 MGP_WSBEiJ_G0000618.1 mouse_genomes_project 1 162623600 162624012 - TEC TEC MGP_WSBEiJ_T0019506.1 MGP_WSBEiJ_G0015494.1 mouse_genomes_project 1 59914735 59954558 + Cd28 protein_coding processed_transcript MGP_WSBEiJ_T0019507.1 MGP_WSBEiJ_G0015494.1 mouse_genomes_project 1 59937764 59964745 + MGP_WSBEiJ_P0019507 Cd28 protein_coding protein_coding MGP_WSBEiJ_T0019508.1 MGP_WSBEiJ_G0015494.1 mouse_genomes_project 1 59937808 59956021 + Cd28 protein_coding retained_intron MGP_WSBEiJ_T0000632.1 MGP_WSBEiJ_G0000575.1 mouse_genomes_project 1 141592973 141595575 + TEC TEC MGP_WSBEiJ_T0021962.1 MGP_WSBEiJ_G0016000.1 mouse_genomes_project 1 155748183 155780829 + MGP_WSBEiJ_P0021962 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021963.1 MGP_WSBEiJ_G0016000.1 mouse_genomes_project 1 155748740 155768037 + MGP_WSBEiJ_P0021963 protein_coding protein_coding MGP_WSBEiJ_T0021964.1 MGP_WSBEiJ_G0016000.1 mouse_genomes_project 1 155748881 155753386 + protein_coding retained_intron MGP_WSBEiJ_T0021965.1 MGP_WSBEiJ_G0016000.1 mouse_genomes_project 1 155751659 155768036 + protein_coding retained_intron MGP_WSBEiJ_T0021966.1 MGP_WSBEiJ_G0016000.1 mouse_genomes_project 1 155767313 155768229 + protein_coding retained_intron MGP_WSBEiJ_T0011801.1 MGP_WSBEiJ_G0009931.1 mouse_genomes_project 1 48891763 48892433 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018732.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35133244 35187194 + MGP_WSBEiJ_P0018732 Vwa3b protein_coding protein_coding MGP_WSBEiJ_T0018733.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35135943 35172689 + MGP_WSBEiJ_P0018733 Vwa3b protein_coding non_stop_decay MGP_WSBEiJ_T0018734.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35135955 35187193 + MGP_WSBEiJ_P0018734 Vwa3b protein_coding protein_coding MGP_WSBEiJ_T0018735.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35136012 35307483 + MGP_WSBEiJ_P0018735 Vwa3b protein_coding unknown_likely_coding MGP_WSBEiJ_T0018736.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35136023 35186923 + MGP_WSBEiJ_P0018736 Vwa3b protein_coding protein_coding MGP_WSBEiJ_T0018737.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35143480 35306479 + MGP_WSBEiJ_P0018737 Vwa3b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018738.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35212631 35221162 + Vwa3b protein_coding retained_intron MGP_WSBEiJ_T0018739.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35212768 35243679 + Vwa3b protein_coding processed_transcript MGP_WSBEiJ_T0018740.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35251379 35258281 + MGP_WSBEiJ_P0018740 Vwa3b protein_coding protein_coding MGP_WSBEiJ_T0018741.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35270649 35307475 + MGP_WSBEiJ_P0018741 Vwa3b protein_coding protein_coding MGP_WSBEiJ_T0018742.1 MGP_WSBEiJ_G0015348.1 mouse_genomes_project 1 35306724 35307483 + Vwa3b protein_coding retained_intron MGP_WSBEiJ_T0021383.1 MGP_WSBEiJ_G0015880.1 mouse_genomes_project 1 134339972 134348697 + MGP_WSBEiJ_P0021383 Klhdc8a protein_coding protein_coding MGP_WSBEiJ_T0005882.1 MGP_WSBEiJ_G0004928.1 mouse_genomes_project 1 168103794 168127036 - lincRNA lincRNA MGP_WSBEiJ_T0023103.1 MGP_WSBEiJ_G0016262.1 mouse_genomes_project 1 182623012 182816830 + Kif26b protein_coding retained_intron MGP_WSBEiJ_T0023104.1 MGP_WSBEiJ_G0016262.1 mouse_genomes_project 1 182623012 183057845 + MGP_WSBEiJ_P0023104 Kif26b protein_coding protein_coding MGP_WSBEiJ_T0023105.1 MGP_WSBEiJ_G0016262.1 mouse_genomes_project 1 182906997 183051500 + MGP_WSBEiJ_P0023105 Kif26b protein_coding protein_coding MGP_WSBEiJ_T0005850.1 MGP_WSBEiJ_G0004903.1 mouse_genomes_project 1 154021510 154025827 + C730036E19Rik lincRNA lincRNA MGP_WSBEiJ_T0009336.1 MGP_WSBEiJ_G0007493.1 mouse_genomes_project 1 41526521 41526606 + Gm24001 miRNA miRNA MGP_WSBEiJ_T0000434.1 MGP_WSBEiJ_G0000379.1 mouse_genomes_project 1 42083114 42084398 + TEC TEC MGP_WSBEiJ_T0018743.1 MGP_WSBEiJ_G0015349.1 mouse_genomes_project 1 35336370 35366296 + MGP_WSBEiJ_P0018743 Cnga3 protein_coding protein_coding MGP_WSBEiJ_T0018744.1 MGP_WSBEiJ_G0015349.1 mouse_genomes_project 1 35340315 35387322 + MGP_WSBEiJ_P0018744 Cnga3 protein_coding protein_coding MGP_WSBEiJ_T0018745.1 MGP_WSBEiJ_G0015349.1 mouse_genomes_project 1 35340315 35387322 + MGP_WSBEiJ_P0018745 Cnga3 protein_coding protein_coding MGP_WSBEiJ_T0018746.1 MGP_WSBEiJ_G0015349.1 mouse_genomes_project 1 35341140 35388522 + MGP_WSBEiJ_P0018746 Cnga3 protein_coding protein_coding MGP_WSBEiJ_T0018747.1 MGP_WSBEiJ_G0015349.1 mouse_genomes_project 1 35355111 35388335 + MGP_WSBEiJ_P0018747 Cnga3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021013.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788354 120011697 + MGP_WSBEiJ_P0021013 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021014.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788354 120011765 + MGP_WSBEiJ_P0021014 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021015.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788354 120011697 + MGP_WSBEiJ_P0021015 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021016.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788354 120011697 + MGP_WSBEiJ_P0021016 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021017.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788640 119908265 + Clasp1 protein_coding retained_intron MGP_WSBEiJ_T0021018.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788756 120009454 + MGP_WSBEiJ_P0021018 Clasp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021019.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788765 120011759 + MGP_WSBEiJ_P0021019 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021020.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788765 120009871 + MGP_WSBEiJ_P0021020 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021021.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788765 120009871 + MGP_WSBEiJ_P0021021 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021022.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788766 120010028 + MGP_WSBEiJ_P0021022 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021023.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788767 119912577 + Clasp1 protein_coding retained_intron MGP_WSBEiJ_T0021024.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788783 120009454 + MGP_WSBEiJ_P0021024 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021025.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119788827 120011505 + MGP_WSBEiJ_P0021025 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021026.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119820654 120011768 + MGP_WSBEiJ_P0021026 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021027.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119820818 120009401 + MGP_WSBEiJ_P0021027 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021028.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119820818 120014882 + MGP_WSBEiJ_P0021028 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021029.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119864444 119902822 + Clasp1 protein_coding retained_intron MGP_WSBEiJ_T0021030.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119875133 120009388 + Clasp1 protein_coding processed_transcript MGP_WSBEiJ_T0021031.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119875188 119908948 + Clasp1 protein_coding processed_transcript MGP_WSBEiJ_T0021032.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119875949 119906444 + Clasp1 protein_coding processed_transcript MGP_WSBEiJ_T0021033.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119877134 119909957 + MGP_WSBEiJ_P0021033 Clasp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021034.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119887399 120009426 + MGP_WSBEiJ_P0021034 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021035.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119915238 119930913 + Clasp1 protein_coding retained_intron MGP_WSBEiJ_T0021036.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119917718 119952979 + MGP_WSBEiJ_P0021036 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021037.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119937136 120011725 + MGP_WSBEiJ_P0021037 Clasp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021038.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119939823 119942548 + Clasp1 protein_coding retained_intron MGP_WSBEiJ_T0021039.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119952278 119952998 + Clasp1 protein_coding retained_intron MGP_WSBEiJ_T0021040.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119953044 119987511 + MGP_WSBEiJ_P0021040 Clasp1 protein_coding protein_coding MGP_WSBEiJ_T0021041.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 119959282 119961371 + Clasp1 protein_coding retained_intron MGP_WSBEiJ_T0021042.1 MGP_WSBEiJ_G0015803.1 mouse_genomes_project 1 120005711 120011697 + Clasp1 protein_coding retained_intron MGP_WSBEiJ_T0019767.1 MGP_WSBEiJ_G0015545.1 mouse_genomes_project 1 72045961 72065748 + MGP_WSBEiJ_P0019767 Tmem169 protein_coding protein_coding MGP_WSBEiJ_T0019768.1 MGP_WSBEiJ_G0015545.1 mouse_genomes_project 1 72045987 72063417 + MGP_WSBEiJ_P0019768 Tmem169 protein_coding protein_coding MGP_WSBEiJ_T0005962.1 MGP_WSBEiJ_G0004990.1 mouse_genomes_project 1 195617074 195619058 + Gm31373 lincRNA lincRNA MGP_WSBEiJ_T0011768.1 MGP_WSBEiJ_G0009898.1 mouse_genomes_project 1 42426957 42427510 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022662.1 MGP_WSBEiJ_G0016142.1 mouse_genomes_project 1 174525317 174526139 + MGP_WSBEiJ_P0022662 Gm26620 protein_coding protein_coding MGP_WSBEiJ_T0011779.1 MGP_WSBEiJ_G0009909.1 mouse_genomes_project 1 44006467 44007448 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022320.1 MGP_WSBEiJ_G0016062.1 mouse_genomes_project 1 165167658 165176016 - MGP_WSBEiJ_P0022320 Fasl protein_coding protein_coding MGP_WSBEiJ_T0022321.1 MGP_WSBEiJ_G0016062.1 mouse_genomes_project 1 165168391 165175879 - MGP_WSBEiJ_P0022321 Fasl protein_coding protein_coding MGP_WSBEiJ_T0021683.1 MGP_WSBEiJ_G0015945.1 mouse_genomes_project 1 138325421 138352033 + MGP_WSBEiJ_P0021683 Tmem9 protein_coding protein_coding MGP_WSBEiJ_T0021684.1 MGP_WSBEiJ_G0015945.1 mouse_genomes_project 1 138335891 138353108 + MGP_WSBEiJ_P0021684 Tmem9 protein_coding protein_coding MGP_WSBEiJ_T0021685.1 MGP_WSBEiJ_G0015945.1 mouse_genomes_project 1 138335986 138352058 + MGP_WSBEiJ_P0021685 Tmem9 protein_coding protein_coding MGP_WSBEiJ_T0021686.1 MGP_WSBEiJ_G0015945.1 mouse_genomes_project 1 138344889 138352165 + Tmem9 protein_coding retained_intron MGP_WSBEiJ_T0021687.1 MGP_WSBEiJ_G0015945.1 mouse_genomes_project 1 138351067 138352546 + Tmem9 protein_coding processed_transcript MGP_WSBEiJ_T0005817.1 MGP_WSBEiJ_G0004876.1 mouse_genomes_project 1 134386106 134393450 + F730311O21Rik lincRNA lincRNA MGP_WSBEiJ_T0000693.1 MGP_WSBEiJ_G0000636.1 mouse_genomes_project 1 165869991 165872255 + TEC TEC MGP_WSBEiJ_T0000433.1 MGP_WSBEiJ_G0000378.1 mouse_genomes_project 1 42005352 42007834 + TEC TEC MGP_WSBEiJ_T0005708.1 MGP_WSBEiJ_G0004785.1 mouse_genomes_project 1 73563373 73661855 - Gm29183 lincRNA lincRNA MGP_WSBEiJ_T0021824.1 MGP_WSBEiJ_G0015974.1 mouse_genomes_project 1 146356597 146389158 + MGP_WSBEiJ_P0021824 Uchl5 protein_coding protein_coding MGP_WSBEiJ_T0021825.1 MGP_WSBEiJ_G0015974.1 mouse_genomes_project 1 146356601 146363568 + Uchl5 protein_coding retained_intron MGP_WSBEiJ_T0021826.1 MGP_WSBEiJ_G0015974.1 mouse_genomes_project 1 146356606 146389319 + MGP_WSBEiJ_P0021826 Uchl5 protein_coding protein_coding MGP_WSBEiJ_T0021827.1 MGP_WSBEiJ_G0015974.1 mouse_genomes_project 1 146356630 146365625 + Uchl5 protein_coding retained_intron MGP_WSBEiJ_T0021828.1 MGP_WSBEiJ_G0015974.1 mouse_genomes_project 1 146356646 146380067 + MGP_WSBEiJ_P0021828 Uchl5 protein_coding protein_coding MGP_WSBEiJ_T0021829.1 MGP_WSBEiJ_G0015974.1 mouse_genomes_project 1 146362950 146374063 + Uchl5 protein_coding retained_intron MGP_WSBEiJ_T0021830.1 MGP_WSBEiJ_G0015974.1 mouse_genomes_project 1 146373959 146377098 + Uchl5 protein_coding retained_intron MGP_WSBEiJ_T0021831.1 MGP_WSBEiJ_G0015974.1 mouse_genomes_project 1 146374001 146388794 + MGP_WSBEiJ_P0021831 Uchl5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022430.1 MGP_WSBEiJ_G0016085.1 mouse_genomes_project 1 167481085 167490500 + MGP_WSBEiJ_P0022430 Sele protein_coding protein_coding MGP_WSBEiJ_T0020326.1 MGP_WSBEiJ_G0015646.1 mouse_genomes_project 1 85300227 85462458 + protein_coding processed_transcript MGP_WSBEiJ_T0009369.1 MGP_WSBEiJ_G0007526.1 mouse_genomes_project 1 93182900 93182960 - Mir6900 miRNA miRNA MGP_WSBEiJ_T0020948.1 MGP_WSBEiJ_G0015783.1 mouse_genomes_project 1 107687030 107867655 - MGP_WSBEiJ_P0020948 Bcl2 protein_coding protein_coding MGP_WSBEiJ_T0020949.1 MGP_WSBEiJ_G0015783.1 mouse_genomes_project 1 107863710 107866560 - MGP_WSBEiJ_P0020949 Bcl2 protein_coding protein_coding MGP_WSBEiJ_T0023363.1 MGP_WSBEiJ_G0016314.1 mouse_genomes_project 1 189041004 189047367 - MGP_WSBEiJ_P0023363 Hlx protein_coding protein_coding MGP_WSBEiJ_T0023364.1 MGP_WSBEiJ_G0016314.1 mouse_genomes_project 1 189041011 189045493 - MGP_WSBEiJ_P0023364 Hlx protein_coding protein_coding MGP_WSBEiJ_T0023066.1 MGP_WSBEiJ_G0016251.1 mouse_genomes_project 1 180807257 180945159 + Sdccag8 protein_coding retained_intron MGP_WSBEiJ_T0023067.1 MGP_WSBEiJ_G0016251.1 mouse_genomes_project 1 180807257 180839485 + Sdccag8 protein_coding retained_intron MGP_WSBEiJ_T0023068.1 MGP_WSBEiJ_G0016251.1 mouse_genomes_project 1 180807257 180850554 + MGP_WSBEiJ_P0023068 Sdccag8 protein_coding protein_coding MGP_WSBEiJ_T0023069.1 MGP_WSBEiJ_G0016251.1 mouse_genomes_project 1 180807257 181013125 + MGP_WSBEiJ_P0023069 Sdccag8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023070.1 MGP_WSBEiJ_G0016251.1 mouse_genomes_project 1 180807257 181013125 + MGP_WSBEiJ_P0023070 Sdccag8 protein_coding protein_coding MGP_WSBEiJ_T0023071.1 MGP_WSBEiJ_G0016251.1 mouse_genomes_project 1 180988017 181013125 + Sdccag8 protein_coding processed_transcript MGP_WSBEiJ_T0011787.1 MGP_WSBEiJ_G0009917.1 mouse_genomes_project 1 46930393 46931379 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009355.1 MGP_WSBEiJ_G0007512.1 mouse_genomes_project 1 74450665 74450742 - Gm25035 miRNA miRNA MGP_WSBEiJ_T0009343.1 MGP_WSBEiJ_G0007500.1 mouse_genomes_project 1 53630188 53630293 + Gm24053 miRNA miRNA MGP_WSBEiJ_T0021242.1 MGP_WSBEiJ_G0015845.1 mouse_genomes_project 1 132310578 132349221 - protein_coding retained_intron MGP_WSBEiJ_T0021243.1 MGP_WSBEiJ_G0015845.1 mouse_genomes_project 1 132347032 132399997 - MGP_WSBEiJ_P0021243 protein_coding protein_coding MGP_WSBEiJ_T0018466.1 MGP_WSBEiJ_G0015299.1 mouse_genomes_project 1 21301724 21363309 - Smap1 protein_coding processed_transcript MGP_WSBEiJ_T0018467.1 MGP_WSBEiJ_G0015299.1 mouse_genomes_project 1 21303255 21375791 - MGP_WSBEiJ_P0018467 Smap1 protein_coding protein_coding MGP_WSBEiJ_T0018468.1 MGP_WSBEiJ_G0015299.1 mouse_genomes_project 1 21303808 21305408 - Smap1 protein_coding processed_transcript MGP_WSBEiJ_T0018469.1 MGP_WSBEiJ_G0015299.1 mouse_genomes_project 1 21304059 21375629 - MGP_WSBEiJ_P0018469 Smap1 protein_coding protein_coding MGP_WSBEiJ_T0018470.1 MGP_WSBEiJ_G0015299.1 mouse_genomes_project 1 21305910 21327034 - Smap1 protein_coding processed_transcript MGP_WSBEiJ_T0018471.1 MGP_WSBEiJ_G0015299.1 mouse_genomes_project 1 21306163 21363276 - Smap1 protein_coding processed_transcript MGP_WSBEiJ_T0018472.1 MGP_WSBEiJ_G0015299.1 mouse_genomes_project 1 21306425 21346346 - Smap1 protein_coding retained_intron MGP_WSBEiJ_T0022993.1 MGP_WSBEiJ_G0016234.1 mouse_genomes_project 1 178315974 178316904 + MGP_WSBEiJ_P0022993 Olfr417 protein_coding protein_coding MGP_WSBEiJ_T0100428.1 MGP_WSBEiJ_G0038887.1 mouse_genomes_project 1 176880695 176880947 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0021907.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154268855 154329996 - MGP_WSBEiJ_P0021907 Swt1 protein_coding protein_coding MGP_WSBEiJ_T0021908.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154269520 154329977 - MGP_WSBEiJ_P0021908 Swt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021909.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154280326 154285490 - Swt1 protein_coding retained_intron MGP_WSBEiJ_T0021910.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154292820 154303693 - MGP_WSBEiJ_P0021910 Swt1 protein_coding protein_coding MGP_WSBEiJ_T0021911.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154301837 154324510 - MGP_WSBEiJ_P0021911 Swt1 protein_coding protein_coding MGP_WSBEiJ_T0021912.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154302464 154305276 - Swt1 protein_coding retained_intron MGP_WSBEiJ_T0021913.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154312283 154314086 - Swt1 protein_coding retained_intron MGP_WSBEiJ_T0021914.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154317425 154324299 - Swt1 protein_coding retained_intron MGP_WSBEiJ_T0021915.1 MGP_WSBEiJ_G0015989.1 mouse_genomes_project 1 154328564 154329996 - Swt1 protein_coding retained_intron MGP_WSBEiJ_T0000515.1 MGP_WSBEiJ_G0000460.1 mouse_genomes_project 1 84970823 84973642 - TEC TEC MGP_WSBEiJ_T0018343.1 MGP_WSBEiJ_G0015266.1 mouse_genomes_project 1 13100666 13137971 - MGP_WSBEiJ_P0018343 Sbspon protein_coding protein_coding MGP_WSBEiJ_T0021125.1 MGP_WSBEiJ_G0015824.1 mouse_genomes_project 1 123078623 123097497 - MGP_WSBEiJ_P0021125 protein_coding protein_coding MGP_WSBEiJ_T0021126.1 MGP_WSBEiJ_G0015824.1 mouse_genomes_project 1 123079860 123084785 - protein_coding retained_intron MGP_WSBEiJ_T0021127.1 MGP_WSBEiJ_G0015824.1 mouse_genomes_project 1 123082820 123085843 - MGP_WSBEiJ_P0021127 protein_coding protein_coding MGP_WSBEiJ_T0021128.1 MGP_WSBEiJ_G0015824.1 mouse_genomes_project 1 123094093 123097230 - protein_coding processed_transcript MGP_WSBEiJ_T0023075.1 MGP_WSBEiJ_G0016253.1 mouse_genomes_project 1 181442496 181446378 + MGP_WSBEiJ_P0023075 protein_coding protein_coding MGP_WSBEiJ_T0023076.1 MGP_WSBEiJ_G0016253.1 mouse_genomes_project 1 181442504 181446427 + MGP_WSBEiJ_P0023076 protein_coding protein_coding MGP_WSBEiJ_T0023077.1 MGP_WSBEiJ_G0016253.1 mouse_genomes_project 1 181443929 181447070 + MGP_WSBEiJ_P0023077 protein_coding protein_coding MGP_WSBEiJ_T0023078.1 MGP_WSBEiJ_G0016253.1 mouse_genomes_project 1 181443941 181446868 + MGP_WSBEiJ_P0023078 protein_coding protein_coding MGP_WSBEiJ_T0023079.1 MGP_WSBEiJ_G0016253.1 mouse_genomes_project 1 181444017 181446800 + MGP_WSBEiJ_P0023079 protein_coding protein_coding MGP_WSBEiJ_T0023080.1 MGP_WSBEiJ_G0016253.1 mouse_genomes_project 1 181444911 181445787 + protein_coding processed_transcript MGP_WSBEiJ_T0019814.1 MGP_WSBEiJ_G0015558.1 mouse_genomes_project 1 74073733 74074538 + MGP_WSBEiJ_P0019814 Arpc2 protein_coding protein_coding MGP_WSBEiJ_T0019815.1 MGP_WSBEiJ_G0015558.1 mouse_genomes_project 1 74074146 74108327 + MGP_WSBEiJ_P0019815 Arpc2 protein_coding protein_coding MGP_WSBEiJ_T0019816.1 MGP_WSBEiJ_G0015558.1 mouse_genomes_project 1 74074166 74108105 + MGP_WSBEiJ_P0019816 Arpc2 protein_coding protein_coding MGP_WSBEiJ_T0019817.1 MGP_WSBEiJ_G0015558.1 mouse_genomes_project 1 74074199 74108106 + MGP_WSBEiJ_P0019817 Arpc2 protein_coding protein_coding MGP_WSBEiJ_T0000500.1 MGP_WSBEiJ_G0000445.1 mouse_genomes_project 1 80255678 80257376 - TEC TEC MGP_WSBEiJ_T0096876.1 MGP_WSBEiJ_G0035557.1 mouse_genomes_project 1 73578361 73578487 + Gm25329 rRNA rRNA MGP_WSBEiJ_T0098755.1 MGP_WSBEiJ_G0037418.1 mouse_genomes_project 1 58172879 58173010 + Gm25502 snoRNA snoRNA MGP_WSBEiJ_T0023351.1 MGP_WSBEiJ_G0016310.1 mouse_genomes_project 1 187701263 187720888 + MGP_WSBEiJ_P0023351 Taf1a protein_coding protein_coding MGP_WSBEiJ_T0023352.1 MGP_WSBEiJ_G0016310.1 mouse_genomes_project 1 187701267 187718538 + MGP_WSBEiJ_P0023352 Taf1a protein_coding protein_coding MGP_WSBEiJ_T0023353.1 MGP_WSBEiJ_G0016310.1 mouse_genomes_project 1 187701340 187720888 + MGP_WSBEiJ_P0023353 Taf1a protein_coding unknown_likely_coding MGP_WSBEiJ_T0023354.1 MGP_WSBEiJ_G0016310.1 mouse_genomes_project 1 187720143 187721733 + MGP_WSBEiJ_P0023354 Taf1a protein_coding protein_coding MGP_WSBEiJ_T0011960.1 MGP_WSBEiJ_G0010090.1 mouse_genomes_project 1 113475207 113475872 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023324.1 MGP_WSBEiJ_G0016306.1 mouse_genomes_project 1 187387788 187529252 - MGP_WSBEiJ_P0023324 Disp1 protein_coding protein_coding MGP_WSBEiJ_T0023325.1 MGP_WSBEiJ_G0016306.1 mouse_genomes_project 1 187387788 187452811 - MGP_WSBEiJ_P0023325 Disp1 protein_coding protein_coding MGP_WSBEiJ_T0023326.1 MGP_WSBEiJ_G0016306.1 mouse_genomes_project 1 187387788 187529247 - MGP_WSBEiJ_P0023326 Disp1 protein_coding protein_coding MGP_WSBEiJ_T0023327.1 MGP_WSBEiJ_G0016306.1 mouse_genomes_project 1 187399836 187452881 - Disp1 protein_coding retained_intron MGP_WSBEiJ_T0023328.1 MGP_WSBEiJ_G0016306.1 mouse_genomes_project 1 187437554 187529284 - MGP_WSBEiJ_P0023328 Disp1 protein_coding protein_coding MGP_WSBEiJ_T0019527.1 MGP_WSBEiJ_G0015499.1 mouse_genomes_project 1 62236496 62375659 - MGP_WSBEiJ_P0019527 Ino80d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019528.1 MGP_WSBEiJ_G0015499.1 mouse_genomes_project 1 62328315 62399327 - MGP_WSBEiJ_P0019528 Ino80d protein_coding protein_coding MGP_WSBEiJ_T0019529.1 MGP_WSBEiJ_G0015499.1 mouse_genomes_project 1 62328315 62398931 - MGP_WSBEiJ_P0019529 Ino80d protein_coding protein_coding MGP_WSBEiJ_T0019530.1 MGP_WSBEiJ_G0015499.1 mouse_genomes_project 1 62328315 62398931 - MGP_WSBEiJ_P0019530 Ino80d protein_coding protein_coding MGP_WSBEiJ_T0019531.1 MGP_WSBEiJ_G0015499.1 mouse_genomes_project 1 62340689 62344116 - Ino80d protein_coding retained_intron MGP_WSBEiJ_T0019532.1 MGP_WSBEiJ_G0015499.1 mouse_genomes_project 1 62342704 62398998 - MGP_WSBEiJ_P0019532 Ino80d protein_coding protein_coding MGP_WSBEiJ_T0019533.1 MGP_WSBEiJ_G0015499.1 mouse_genomes_project 1 62342718 62398919 - MGP_WSBEiJ_P0019533 Ino80d protein_coding protein_coding MGP_WSBEiJ_T0097594.1 MGP_WSBEiJ_G0036257.1 mouse_genomes_project 1 175479113 175479220 - Gm22950 snRNA snRNA MGP_WSBEiJ_T0098736.1 MGP_WSBEiJ_G0037399.1 mouse_genomes_project 1 16867531 16867596 - Gm24633 snoRNA snoRNA MGP_WSBEiJ_T0000554.1 MGP_WSBEiJ_G0000499.1 mouse_genomes_project 1 107754428 107756515 - TEC TEC MGP_WSBEiJ_T0020367.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86275549 86281926 + Psmd1 protein_coding retained_intron MGP_WSBEiJ_T0020368.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86275549 86282815 + Psmd1 protein_coding processed_transcript MGP_WSBEiJ_T0020369.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86275782 86345597 + MGP_WSBEiJ_P0020369 Psmd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020370.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86275782 86351990 + MGP_WSBEiJ_P0020370 Psmd1 protein_coding protein_coding MGP_WSBEiJ_T0020371.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86275804 86278822 + Psmd1 protein_coding retained_intron MGP_WSBEiJ_T0020372.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86275855 86283439 + Psmd1 protein_coding retained_intron MGP_WSBEiJ_T0020373.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86276034 86287097 + Psmd1 protein_coding processed_transcript MGP_WSBEiJ_T0020376.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86322264 86345648 + Psmd1 protein_coding processed_transcript MGP_WSBEiJ_T0020377.1 MGP_WSBEiJ_G0015656.1 mouse_genomes_project 1 86339769 86345615 + Psmd1 protein_coding retained_intron MGP_WSBEiJ_T0018203.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6926232 7036328 + MGP_WSBEiJ_P0018203 Sgk3 protein_coding protein_coding MGP_WSBEiJ_T0018204.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6926268 7036330 + MGP_WSBEiJ_P0018204 Sgk3 protein_coding protein_coding MGP_WSBEiJ_T0018205.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6926268 7036255 + MGP_WSBEiJ_P0018205 Sgk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018206.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6926283 6962405 + Sgk3 protein_coding retained_intron MGP_WSBEiJ_T0018207.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6926310 7035103 + MGP_WSBEiJ_P0018207 Sgk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018208.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6926333 7035493 + MGP_WSBEiJ_P0018208 Sgk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018209.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6982850 7036328 + MGP_WSBEiJ_P0018209 Sgk3 protein_coding protein_coding MGP_WSBEiJ_T0018210.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6982899 7000631 + Sgk3 protein_coding processed_transcript MGP_WSBEiJ_T0018211.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6982899 7007546 + Sgk3 protein_coding retained_intron MGP_WSBEiJ_T0018212.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 6982975 7035338 + MGP_WSBEiJ_P0018212 Sgk3 protein_coding protein_coding MGP_WSBEiJ_T0018213.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 7018764 7024373 + Sgk3 protein_coding retained_intron MGP_WSBEiJ_T0018214.1 MGP_WSBEiJ_G0015244.1 mouse_genomes_project 1 7030911 7034659 + Sgk3 protein_coding retained_intron MGP_WSBEiJ_T0023380.1 MGP_WSBEiJ_G0016319.1 mouse_genomes_project 1 189541275 189625980 + MGP_WSBEiJ_P0023380 Rab3gap2 protein_coding protein_coding MGP_WSBEiJ_T0023381.1 MGP_WSBEiJ_G0016319.1 mouse_genomes_project 1 189541275 189628554 + MGP_WSBEiJ_P0023381 Rab3gap2 protein_coding protein_coding MGP_WSBEiJ_T0023382.1 MGP_WSBEiJ_G0016319.1 mouse_genomes_project 1 189541336 189543610 + Rab3gap2 protein_coding retained_intron MGP_WSBEiJ_T0023383.1 MGP_WSBEiJ_G0016319.1 mouse_genomes_project 1 189604477 189628539 + Rab3gap2 protein_coding retained_intron MGP_WSBEiJ_T0023384.1 MGP_WSBEiJ_G0016319.1 mouse_genomes_project 1 189604640 189626518 + Rab3gap2 protein_coding retained_intron MGP_WSBEiJ_T0023385.1 MGP_WSBEiJ_G0016319.1 mouse_genomes_project 1 189619336 189623490 + Rab3gap2 protein_coding retained_intron MGP_WSBEiJ_T0005713.1 MGP_WSBEiJ_G0004789.1 mouse_genomes_project 1 76775576 76919476 - Gm816 lincRNA lincRNA MGP_WSBEiJ_T0000591.1 MGP_WSBEiJ_G0000536.1 mouse_genomes_project 1 131731222 131733492 + TEC TEC MGP_WSBEiJ_T0022644.1 MGP_WSBEiJ_G0016138.1 mouse_genomes_project 1 173916238 173919549 + MGP_WSBEiJ_P0022644 1700015E13Rik protein_coding protein_coding MGP_WSBEiJ_T0097560.1 MGP_WSBEiJ_G0036223.1 mouse_genomes_project 1 99951301 99951401 + Gm23434 snRNA snRNA MGP_WSBEiJ_T0098759.1 MGP_WSBEiJ_G0037422.1 mouse_genomes_project 1 58835597 58835681 + Snord11 snoRNA snoRNA MGP_WSBEiJ_T0011664.1 MGP_WSBEiJ_G0009794.1 mouse_genomes_project 1 4243601 4243779 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012076.1 MGP_WSBEiJ_G0010206.1 mouse_genomes_project 1 167138566 167139608 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011699.1 MGP_WSBEiJ_G0009829.1 mouse_genomes_project 1 16031734 16032645 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022121.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159416081 159520349 - MGP_WSBEiJ_P0022121 protein_coding protein_coding MGP_WSBEiJ_T0022122.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159416081 159523053 - MGP_WSBEiJ_P0022122 protein_coding protein_coding MGP_WSBEiJ_T0022123.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159422985 159521467 - MGP_WSBEiJ_P0022123 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022124.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159422985 159520421 - MGP_WSBEiJ_P0022124 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022125.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159450981 159470997 - protein_coding processed_transcript MGP_WSBEiJ_T0022126.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159459378 159496656 - protein_coding processed_transcript MGP_WSBEiJ_T0022127.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159459979 159495214 - MGP_WSBEiJ_P0022127 protein_coding protein_coding MGP_WSBEiJ_T0022128.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159496704 159500457 - protein_coding processed_transcript MGP_WSBEiJ_T0022129.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159520399 159521925 - MGP_WSBEiJ_P0022129 protein_coding protein_coding MGP_WSBEiJ_T0022130.1 MGP_WSBEiJ_G0016031.1 mouse_genomes_project 1 159520399 159521961 - MGP_WSBEiJ_P0022130 protein_coding protein_coding MGP_WSBEiJ_T0011689.1 MGP_WSBEiJ_G0009819.1 mouse_genomes_project 1 13288211 13288764 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018875.1 MGP_WSBEiJ_G0015376.1 mouse_genomes_project 1 38071363 38072548 - MGP_WSBEiJ_P0018875 Gm3646 protein_coding protein_coding MGP_WSBEiJ_T0022997.1 MGP_WSBEiJ_G0016237.1 mouse_genomes_project 1 178382646 178390848 + MGP_WSBEiJ_P0022997 Olfr220 protein_coding protein_coding MGP_WSBEiJ_T0022998.1 MGP_WSBEiJ_G0016237.1 mouse_genomes_project 1 178389870 178390848 + MGP_WSBEiJ_P0022998 Olfr220 protein_coding protein_coding MGP_WSBEiJ_T0000426.1 MGP_WSBEiJ_G0000371.1 mouse_genomes_project 1 37204802 37206441 + TEC TEC MGP_WSBEiJ_T0005570.1 MGP_WSBEiJ_G0004683.1 mouse_genomes_project 1 10244562 10256295 + Gm29283 lincRNA lincRNA MGP_WSBEiJ_T0016493.1 MGP_WSBEiJ_G0014544.1 mouse_genomes_project 1 181459944 181462099 + Gm29856 processed_transcript processed_transcript MGP_WSBEiJ_T0016494.1 MGP_WSBEiJ_G0014544.1 mouse_genomes_project 1 181461077 181462100 + Gm29856 processed_transcript processed_transcript MGP_WSBEiJ_T0097243.1 MGP_WSBEiJ_G0035923.1 mouse_genomes_project 1 82858294 82859280 + Gm28941 sense_intronic sense_intronic MGP_WSBEiJ_T0022216.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162512483 162530420 + MGP_WSBEiJ_P0022216 Rfwd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022217.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162512485 162635205 + MGP_WSBEiJ_P0022217 Rfwd2 protein_coding protein_coding MGP_WSBEiJ_T0022218.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162512807 162571659 + MGP_WSBEiJ_P0022218 Rfwd2 protein_coding protein_coding MGP_WSBEiJ_T0022219.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162512849 162530443 + MGP_WSBEiJ_P0022219 Rfwd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022220.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162519857 162548201 + Rfwd2 protein_coding retained_intron MGP_WSBEiJ_T0022221.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162529532 162587763 + MGP_WSBEiJ_P0022221 Rfwd2 protein_coding protein_coding MGP_WSBEiJ_T0022222.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162539884 162589654 + MGP_WSBEiJ_P0022222 Rfwd2 protein_coding protein_coding MGP_WSBEiJ_T0022223.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162547948 162556717 + Rfwd2 protein_coding retained_intron MGP_WSBEiJ_T0022224.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162587801 162591142 + Rfwd2 protein_coding retained_intron MGP_WSBEiJ_T0022225.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162587812 162611230 + MGP_WSBEiJ_P0022225 Rfwd2 protein_coding protein_coding MGP_WSBEiJ_T0022226.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162589599 162611310 + Rfwd2 protein_coding retained_intron MGP_WSBEiJ_T0022227.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162607189 162612158 + Rfwd2 protein_coding retained_intron MGP_WSBEiJ_T0022228.1 MGP_WSBEiJ_G0016045.1 mouse_genomes_project 1 162629893 162632630 + Rfwd2 protein_coding retained_intron MGP_WSBEiJ_T0002812.1 MGP_WSBEiJ_G0002661.1 mouse_genomes_project 1 132785607 132799615 - Gm15848 antisense antisense MGP_WSBEiJ_T0002813.1 MGP_WSBEiJ_G0002661.1 mouse_genomes_project 1 132785832 132796205 - Gm15848 antisense antisense MGP_WSBEiJ_T0002814.1 MGP_WSBEiJ_G0002661.1 mouse_genomes_project 1 132792922 132796235 - Gm15848 antisense antisense MGP_WSBEiJ_T0005819.1 MGP_WSBEiJ_G0004878.1 mouse_genomes_project 1 135983448 135987620 + Gm28441 lincRNA lincRNA MGP_WSBEiJ_T0002900.1 MGP_WSBEiJ_G0002730.1 mouse_genomes_project 1 185171176 185178632 - 2210411M09Rik antisense antisense MGP_WSBEiJ_T0021867.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153195767 153228242 - MGP_WSBEiJ_P0021867 BC003331 protein_coding protein_coding MGP_WSBEiJ_T0021868.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153195775 153228217 - MGP_WSBEiJ_P0021868 BC003331 protein_coding protein_coding MGP_WSBEiJ_T0021869.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153195775 153227924 - MGP_WSBEiJ_P0021869 BC003331 protein_coding protein_coding MGP_WSBEiJ_T0021870.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153196983 153227881 - MGP_WSBEiJ_P0021870 BC003331 protein_coding protein_coding MGP_WSBEiJ_T0021871.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153196992 153227905 - MGP_WSBEiJ_P0021871 BC003331 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021872.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153209774 153217636 - BC003331 protein_coding retained_intron MGP_WSBEiJ_T0021873.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153210502 153228099 - BC003331 protein_coding processed_transcript MGP_WSBEiJ_T0021874.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153219443 153227910 - BC003331 protein_coding retained_intron MGP_WSBEiJ_T0021875.1 MGP_WSBEiJ_G0015984.1 mouse_genomes_project 1 153223172 153227909 - BC003331 protein_coding retained_intron MGP_WSBEiJ_T0009363.1 MGP_WSBEiJ_G0007520.1 mouse_genomes_project 1 84864006 84864083 + Mir5126 miRNA miRNA MGP_WSBEiJ_T0018439.1 MGP_WSBEiJ_G0015292.1 mouse_genomes_project 1 18615466 18640506 + MGP_WSBEiJ_P0018439 Gsta3 protein_coding protein_coding MGP_WSBEiJ_T0018440.1 MGP_WSBEiJ_G0015292.1 mouse_genomes_project 1 18615484 18639866 + MGP_WSBEiJ_P0018440 Gsta3 protein_coding protein_coding MGP_WSBEiJ_T0018441.1 MGP_WSBEiJ_G0015292.1 mouse_genomes_project 1 18615506 18639691 + MGP_WSBEiJ_P0018441 Gsta3 protein_coding protein_coding MGP_WSBEiJ_T0018442.1 MGP_WSBEiJ_G0015292.1 mouse_genomes_project 1 18628359 18631150 + Gsta3 protein_coding retained_intron MGP_WSBEiJ_T0011685.1 MGP_WSBEiJ_G0009815.1 mouse_genomes_project 1 10237869 10238190 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002723.1 MGP_WSBEiJ_G0002594.1 mouse_genomes_project 1 37907550 37915589 + D930019O06Rik antisense antisense MGP_WSBEiJ_T0098757.1 MGP_WSBEiJ_G0037420.1 mouse_genomes_project 1 58823319 58823403 + Gm26293 snoRNA snoRNA MGP_WSBEiJ_T0012025.1 MGP_WSBEiJ_G0010155.1 mouse_genomes_project 1 145280487 145280782 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000549.1 MGP_WSBEiJ_G0000494.1 mouse_genomes_project 1 106014840 106017651 + TEC TEC MGP_WSBEiJ_T0005750.1 MGP_WSBEiJ_G0004822.1 mouse_genomes_project 1 92160571 92162322 + Gm28382 lincRNA lincRNA MGP_WSBEiJ_T0020570.1 MGP_WSBEiJ_G0015702.1 mouse_genomes_project 1 90606594 90722428 - MGP_WSBEiJ_P0020570 Iqca protein_coding unknown_likely_coding MGP_WSBEiJ_T0020571.1 MGP_WSBEiJ_G0015702.1 mouse_genomes_project 1 90606597 90722654 - MGP_WSBEiJ_P0020571 Iqca protein_coding protein_coding MGP_WSBEiJ_T0020572.1 MGP_WSBEiJ_G0015702.1 mouse_genomes_project 1 90606600 90658920 - Iqca protein_coding processed_transcript MGP_WSBEiJ_T0020573.1 MGP_WSBEiJ_G0015702.1 mouse_genomes_project 1 90625064 90632526 - MGP_WSBEiJ_P0020573 Iqca protein_coding protein_coding MGP_WSBEiJ_T0020574.1 MGP_WSBEiJ_G0015702.1 mouse_genomes_project 1 90696121 90722654 - Iqca protein_coding processed_transcript MGP_WSBEiJ_T0022620.1 MGP_WSBEiJ_G0016130.1 mouse_genomes_project 1 173534538 173554259 - MGP_WSBEiJ_P0022620 Hsd17b7 protein_coding protein_coding MGP_WSBEiJ_T0022621.1 MGP_WSBEiJ_G0016130.1 mouse_genomes_project 1 173537857 173550748 - Hsd17b7 protein_coding processed_transcript MGP_WSBEiJ_T0022622.1 MGP_WSBEiJ_G0016130.1 mouse_genomes_project 1 173540481 173554259 - MGP_WSBEiJ_P0022622 Hsd17b7 protein_coding protein_coding MGP_WSBEiJ_T0022623.1 MGP_WSBEiJ_G0016130.1 mouse_genomes_project 1 173544409 173551175 - Hsd17b7 protein_coding processed_transcript MGP_WSBEiJ_T0000361.1 MGP_WSBEiJ_G0000309.1 mouse_genomes_project 1 11999219 12003540 + TEC TEC MGP_WSBEiJ_T0000570.1 MGP_WSBEiJ_G0000515.1 mouse_genomes_project 1 125053658 125056919 - TEC TEC MGP_WSBEiJ_T0005639.1 MGP_WSBEiJ_G0004734.1 mouse_genomes_project 1 49555279 49557577 + Gm28321 lincRNA lincRNA MGP_WSBEiJ_T0002729.1 MGP_WSBEiJ_G0002599.1 mouse_genomes_project 1 41545884 41546754 + Gm28782 antisense antisense MGP_WSBEiJ_T0019409.1 MGP_WSBEiJ_G0015479.1 mouse_genomes_project 1 58266549 58343798 - MGP_WSBEiJ_P0019409 Als2 protein_coding protein_coding MGP_WSBEiJ_T0019410.1 MGP_WSBEiJ_G0015479.1 mouse_genomes_project 1 58267681 58343660 - MGP_WSBEiJ_P0019410 Als2 protein_coding protein_coding MGP_WSBEiJ_T0019411.1 MGP_WSBEiJ_G0015479.1 mouse_genomes_project 1 58296805 58343798 - Als2 protein_coding retained_intron MGP_WSBEiJ_T0019412.1 MGP_WSBEiJ_G0015479.1 mouse_genomes_project 1 58321883 58343793 - MGP_WSBEiJ_P0019412 Als2 protein_coding protein_coding MGP_WSBEiJ_T0019413.1 MGP_WSBEiJ_G0015479.1 mouse_genomes_project 1 58322574 58325352 - Als2 protein_coding retained_intron MGP_WSBEiJ_T0019483.1 MGP_WSBEiJ_G0015491.1 mouse_genomes_project 1 59529345 59559968 + Cyp20a1 protein_coding retained_intron MGP_WSBEiJ_T0019484.1 MGP_WSBEiJ_G0015491.1 mouse_genomes_project 1 59529345 59576653 + MGP_WSBEiJ_P0019484 Cyp20a1 protein_coding protein_coding MGP_WSBEiJ_T0019485.1 MGP_WSBEiJ_G0015491.1 mouse_genomes_project 1 59529345 59576653 + MGP_WSBEiJ_P0019485 Cyp20a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000483.1 MGP_WSBEiJ_G0000428.1 mouse_genomes_project 1 69380861 69382747 + TEC TEC MGP_WSBEiJ_T0023541.1 MGP_WSBEiJ_G0016351.1 mouse_genomes_project 1 196197380 196236699 - MGP_WSBEiJ_P0023541 Dtl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023542.1 MGP_WSBEiJ_G0016351.1 mouse_genomes_project 1 196197389 196236722 - MGP_WSBEiJ_P0023542 Dtl protein_coding protein_coding MGP_WSBEiJ_T0023543.1 MGP_WSBEiJ_G0016351.1 mouse_genomes_project 1 196199128 196236692 - Dtl protein_coding processed_transcript MGP_WSBEiJ_T0023544.1 MGP_WSBEiJ_G0016351.1 mouse_genomes_project 1 196211994 196236691 - MGP_WSBEiJ_P0023544 Dtl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023545.1 MGP_WSBEiJ_G0016351.1 mouse_genomes_project 1 196221518 196236689 - Dtl protein_coding retained_intron MGP_WSBEiJ_T0023546.1 MGP_WSBEiJ_G0016351.1 mouse_genomes_project 1 196231981 196236691 - Dtl protein_coding retained_intron MGP_WSBEiJ_T0020597.1 MGP_WSBEiJ_G0015708.1 mouse_genomes_project 1 91626435 91634992 - MGP_WSBEiJ_P0020597 Rab17 protein_coding protein_coding MGP_WSBEiJ_T0020598.1 MGP_WSBEiJ_G0015708.1 mouse_genomes_project 1 91626437 91632987 - MGP_WSBEiJ_P0020598 Rab17 protein_coding protein_coding MGP_WSBEiJ_T0020599.1 MGP_WSBEiJ_G0015708.1 mouse_genomes_project 1 91627033 91634879 - Rab17 protein_coding processed_transcript MGP_WSBEiJ_T0020600.1 MGP_WSBEiJ_G0015708.1 mouse_genomes_project 1 91627156 91632937 - Rab17 protein_coding processed_transcript MGP_WSBEiJ_T0020601.1 MGP_WSBEiJ_G0015708.1 mouse_genomes_project 1 91628295 91634975 - MGP_WSBEiJ_P0020601 Rab17 protein_coding protein_coding MGP_WSBEiJ_T0000641.1 MGP_WSBEiJ_G0000584.1 mouse_genomes_project 1 150028283 150029454 - TEC TEC MGP_WSBEiJ_T0000516.1 MGP_WSBEiJ_G0000461.1 mouse_genomes_project 1 84986361 84992317 - TEC TEC MGP_WSBEiJ_T0021822.1 MGP_WSBEiJ_G0015973.1 mouse_genomes_project 1 146330223 146356394 - MGP_WSBEiJ_P0021822 Trove2 protein_coding protein_coding MGP_WSBEiJ_T0021823.1 MGP_WSBEiJ_G0015973.1 mouse_genomes_project 1 146335281 146356248 - Trove2 protein_coding retained_intron MGP_WSBEiJ_T0022518.1 MGP_WSBEiJ_G0016105.1 mouse_genomes_project 1 169266092 169278554 + MGP_WSBEiJ_P0022518 Creg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022519.1 MGP_WSBEiJ_G0016105.1 mouse_genomes_project 1 169266092 169278554 + MGP_WSBEiJ_P0022519 Creg1 protein_coding protein_coding MGP_WSBEiJ_T0022520.1 MGP_WSBEiJ_G0016105.1 mouse_genomes_project 1 169272753 169277166 + MGP_WSBEiJ_P0022520 Creg1 protein_coding protein_coding MGP_WSBEiJ_T0000574.1 MGP_WSBEiJ_G0000519.1 mouse_genomes_project 1 126031669 126035334 - TEC TEC MGP_WSBEiJ_T0011977.1 MGP_WSBEiJ_G0010107.1 mouse_genomes_project 1 121241161 121241871 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000599.1 MGP_WSBEiJ_G0000544.1 mouse_genomes_project 1 133946345 133946852 - TEC TEC MGP_WSBEiJ_T0009338.1 MGP_WSBEiJ_G0007495.1 mouse_genomes_project 1 43782593 43782734 + miRNA miRNA MGP_WSBEiJ_T0023114.1 MGP_WSBEiJ_G0016265.1 mouse_genomes_project 1 183685220 183703338 - MGP_WSBEiJ_P0023114 protein_coding protein_coding MGP_WSBEiJ_T0005869.1 MGP_WSBEiJ_G0004917.1 mouse_genomes_project 1 162391647 162427312 + 4930562F17Rik lincRNA lincRNA MGP_WSBEiJ_T0011065.1 MGP_WSBEiJ_G0009222.1 mouse_genomes_project 1 180782474 180782738 + Gm25288 misc_RNA misc_RNA MGP_WSBEiJ_T0000634.1 MGP_WSBEiJ_G0000577.1 mouse_genomes_project 1 143850274 143850763 + TEC TEC MGP_WSBEiJ_T0011975.1 MGP_WSBEiJ_G0010105.1 mouse_genomes_project 1 120671858 120672670 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020913.1 MGP_WSBEiJ_G0015777.1 mouse_genomes_project 1 106384025 106469096 - MGP_WSBEiJ_P0020913 Rnf152 protein_coding protein_coding MGP_WSBEiJ_T0020914.1 MGP_WSBEiJ_G0015777.1 mouse_genomes_project 1 106384028 106469134 - MGP_WSBEiJ_P0020914 Rnf152 protein_coding protein_coding MGP_WSBEiJ_T0005891.1 MGP_WSBEiJ_G0004934.1 mouse_genomes_project 1 169279113 169280403 - Gm36972 lincRNA lincRNA MGP_WSBEiJ_T0018373.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13893859 13909019 - MGP_WSBEiJ_P0018373 Tceb1 protein_coding protein_coding MGP_WSBEiJ_T0018374.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13894901 13909177 - MGP_WSBEiJ_P0018374 Tceb1 protein_coding protein_coding MGP_WSBEiJ_T0018375.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13895276 13909153 - MGP_WSBEiJ_P0018375 Tceb1 protein_coding protein_coding MGP_WSBEiJ_T0018376.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13895303 13909173 - MGP_WSBEiJ_P0018376 Tceb1 protein_coding protein_coding MGP_WSBEiJ_T0018377.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13895325 13909049 - MGP_WSBEiJ_P0018377 Tceb1 protein_coding protein_coding MGP_WSBEiJ_T0018378.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13895476 13900178 - MGP_WSBEiJ_P0018378 Tceb1 protein_coding protein_coding MGP_WSBEiJ_T0018379.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13895606 13908760 - MGP_WSBEiJ_P0018379 Tceb1 protein_coding protein_coding MGP_WSBEiJ_T0018380.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13898974 13909035 - Tceb1 protein_coding retained_intron MGP_WSBEiJ_T0018381.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13899093 13909050 - Tceb1 protein_coding retained_intron MGP_WSBEiJ_T0018382.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13899819 13909013 - Tceb1 protein_coding retained_intron MGP_WSBEiJ_T0018383.1 MGP_WSBEiJ_G0015272.1 mouse_genomes_project 1 13899874 13909177 - Tceb1 protein_coding retained_intron MGP_WSBEiJ_T0097604.1 MGP_WSBEiJ_G0036267.1 mouse_genomes_project 1 193263356 193263460 + Gm25269 snRNA snRNA MGP_WSBEiJ_T0011690.1 MGP_WSBEiJ_G0009820.1 mouse_genomes_project 1 13915114 13915797 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012049.1 MGP_WSBEiJ_G0010179.1 mouse_genomes_project 1 154408792 154409669 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100410.1 MGP_WSBEiJ_G0038869.1 mouse_genomes_project 1 98050985 98236790 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011675.1 MGP_WSBEiJ_G0009805.1 mouse_genomes_project 1 6553285 6554455 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097535.1 MGP_WSBEiJ_G0036198.1 mouse_genomes_project 1 47084288 47084409 - Gm23240 snRNA snRNA MGP_WSBEiJ_T0023478.1 MGP_WSBEiJ_G0016337.1 mouse_genomes_project 1 194698799 194753048 - MGP_WSBEiJ_P0023478 Prox1 protein_coding protein_coding MGP_WSBEiJ_T0023479.1 MGP_WSBEiJ_G0016337.1 mouse_genomes_project 1 194703214 194751731 - MGP_WSBEiJ_P0023479 Prox1 protein_coding protein_coding MGP_WSBEiJ_T0023480.1 MGP_WSBEiJ_G0016337.1 mouse_genomes_project 1 194703771 194753014 - MGP_WSBEiJ_P0023480 Prox1 protein_coding protein_coding MGP_WSBEiJ_T0020705.1 MGP_WSBEiJ_G0015730.1 mouse_genomes_project 1 93317905 93318890 + MGP_WSBEiJ_P0020705 Olfr1411 protein_coding protein_coding MGP_WSBEiJ_T0022155.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159939762 160077354 - MGP_WSBEiJ_P0022155 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022156.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159942356 160077351 - MGP_WSBEiJ_P0022156 Ralgps2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022157.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159942356 160077295 - MGP_WSBEiJ_P0022157 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022158.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159943304 160077139 - MGP_WSBEiJ_P0022158 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022159.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159943710 160077283 - MGP_WSBEiJ_P0022159 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022160.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159943716 160077360 - MGP_WSBEiJ_P0022160 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022161.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159944424 159950024 - Ralgps2 protein_coding retained_intron MGP_WSBEiJ_T0022162.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159949536 160077378 - MGP_WSBEiJ_P0022162 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022163.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159952956 160077319 - MGP_WSBEiJ_P0022163 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022164.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159955312 160077345 - MGP_WSBEiJ_P0022164 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022165.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159955331 160076570 - MGP_WSBEiJ_P0022165 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022166.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159964914 159967264 - Ralgps2 protein_coding retained_intron MGP_WSBEiJ_T0022167.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 159964968 159969108 - Ralgps2 protein_coding retained_intron MGP_WSBEiJ_T0022170.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 160017555 160076886 - MGP_WSBEiJ_P0022170 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0022171.1 MGP_WSBEiJ_G0016036.1 mouse_genomes_project 1 160032786 160076533 - MGP_WSBEiJ_P0022171 Ralgps2 protein_coding protein_coding MGP_WSBEiJ_T0000369.1 MGP_WSBEiJ_G0000317.1 mouse_genomes_project 1 18608100 18611641 + TEC TEC MGP_WSBEiJ_T0000347.1 MGP_WSBEiJ_G0000295.1 mouse_genomes_project 1 8503302 8506332 - TEC TEC MGP_WSBEiJ_T0022298.1 MGP_WSBEiJ_G0016057.1 mouse_genomes_project 1 164450462 164496896 - Klhl20 protein_coding retained_intron MGP_WSBEiJ_T0022299.1 MGP_WSBEiJ_G0016057.1 mouse_genomes_project 1 164450462 164496896 - MGP_WSBEiJ_P0022299 Klhl20 protein_coding protein_coding MGP_WSBEiJ_T0022300.1 MGP_WSBEiJ_G0016057.1 mouse_genomes_project 1 164450467 164496813 - MGP_WSBEiJ_P0022300 Klhl20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022301.1 MGP_WSBEiJ_G0016057.1 mouse_genomes_project 1 164450485 164457712 - MGP_WSBEiJ_P0022301 Klhl20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022302.1 MGP_WSBEiJ_G0016057.1 mouse_genomes_project 1 164458532 164496896 - Klhl20 protein_coding retained_intron MGP_WSBEiJ_T0022303.1 MGP_WSBEiJ_G0016057.1 mouse_genomes_project 1 164463389 164467627 - Klhl20 protein_coding retained_intron MGP_WSBEiJ_T0022304.1 MGP_WSBEiJ_G0016057.1 mouse_genomes_project 1 164471356 164496827 - Klhl20 protein_coding retained_intron MGP_WSBEiJ_T0000749.1 MGP_WSBEiJ_G0000690.1 mouse_genomes_project 1 188742416 188743171 + TEC TEC MGP_WSBEiJ_T0023014.1 MGP_WSBEiJ_G0016241.1 mouse_genomes_project 1 179557500 179584243 - MGP_WSBEiJ_P0023014 Fh1 protein_coding protein_coding MGP_WSBEiJ_T0023015.1 MGP_WSBEiJ_G0016241.1 mouse_genomes_project 1 179558502 179561423 - Fh1 protein_coding retained_intron MGP_WSBEiJ_T0023016.1 MGP_WSBEiJ_G0016241.1 mouse_genomes_project 1 179558504 179563785 - Fh1 protein_coding retained_intron MGP_WSBEiJ_T0023017.1 MGP_WSBEiJ_G0016241.1 mouse_genomes_project 1 179558510 179566851 - MGP_WSBEiJ_P0023017 Fh1 protein_coding protein_coding MGP_WSBEiJ_T0023018.1 MGP_WSBEiJ_G0016241.1 mouse_genomes_project 1 179573383 179584181 - MGP_WSBEiJ_P0023018 Fh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002831.1 MGP_WSBEiJ_G0002674.1 mouse_genomes_project 1 137874394 137889572 + Gm4793 antisense antisense MGP_WSBEiJ_T0011734.1 MGP_WSBEiJ_G0009864.1 mouse_genomes_project 1 30954814 30956966 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099971.1 MGP_WSBEiJ_G0038631.1 mouse_genomes_project 1 78950849 78950998 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0021930.1 MGP_WSBEiJ_G0015992.1 mouse_genomes_project 1 154477232 154555858 + MGP_WSBEiJ_P0021930 Fam129a protein_coding protein_coding MGP_WSBEiJ_T0021931.1 MGP_WSBEiJ_G0015992.1 mouse_genomes_project 1 154477417 154638316 + MGP_WSBEiJ_P0021931 Fam129a protein_coding protein_coding MGP_WSBEiJ_T0021932.1 MGP_WSBEiJ_G0015992.1 mouse_genomes_project 1 154477496 154635719 + MGP_WSBEiJ_P0021932 Fam129a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021933.1 MGP_WSBEiJ_G0015992.1 mouse_genomes_project 1 154477540 154605409 + MGP_WSBEiJ_P0021933 Fam129a protein_coding protein_coding MGP_WSBEiJ_T0021934.1 MGP_WSBEiJ_G0015992.1 mouse_genomes_project 1 154590753 154635719 + Fam129a protein_coding processed_transcript MGP_WSBEiJ_T0100423.1 MGP_WSBEiJ_G0038882.1 mouse_genomes_project 1 162479925 162481872 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011820.1 MGP_WSBEiJ_G0009950.1 mouse_genomes_project 1 54272104 54272452 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098735.1 MGP_WSBEiJ_G0037398.1 mouse_genomes_project 1 16303191 16303263 - Gm24075 snoRNA snoRNA MGP_WSBEiJ_T0022904.1 MGP_WSBEiJ_G0016193.1 mouse_genomes_project 1 176135871 176143368 + MGP_WSBEiJ_P0022904 Pigm protein_coding protein_coding MGP_WSBEiJ_T0022906.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176244143 176253524 + MGP_WSBEiJ_P0022906 Igsf9 protein_coding protein_coding MGP_WSBEiJ_T0022907.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176244553 176255586 + MGP_WSBEiJ_P0022907 Igsf9 protein_coding protein_coding MGP_WSBEiJ_T0022908.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176244560 176253561 + Igsf9 protein_coding processed_transcript MGP_WSBEiJ_T0022909.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176244569 176262815 + MGP_WSBEiJ_P0022909 Igsf9 protein_coding protein_coding MGP_WSBEiJ_T0022910.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176244574 176253744 + Igsf9 protein_coding retained_intron MGP_WSBEiJ_T0022911.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176244574 176254978 + Igsf9 protein_coding retained_intron MGP_WSBEiJ_T0022912.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176244585 176262815 + MGP_WSBEiJ_P0022912 Igsf9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022913.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176244668 176262816 + MGP_WSBEiJ_P0022913 Igsf9 protein_coding protein_coding MGP_WSBEiJ_T0022914.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176255031 176255925 + Igsf9 protein_coding retained_intron MGP_WSBEiJ_T0022915.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176255908 176258813 + MGP_WSBEiJ_P0022915 Igsf9 protein_coding protein_coding MGP_WSBEiJ_T0022916.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176257880 176259675 + Igsf9 protein_coding retained_intron MGP_WSBEiJ_T0022917.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176257907 176259701 + Igsf9 protein_coding retained_intron MGP_WSBEiJ_T0022918.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176258705 176260163 + Igsf9 protein_coding retained_intron MGP_WSBEiJ_T0022919.1 MGP_WSBEiJ_G0016195.1 mouse_genomes_project 1 176261732 176262554 + Igsf9 protein_coding retained_intron MGP_WSBEiJ_T0023365.1 MGP_WSBEiJ_G0016315.1 mouse_genomes_project 1 189108137 189133601 - MGP_WSBEiJ_P0023365 Marc1 protein_coding protein_coding MGP_WSBEiJ_T0023366.1 MGP_WSBEiJ_G0016315.1 mouse_genomes_project 1 189109076 189133417 - MGP_WSBEiJ_P0023366 Marc1 protein_coding protein_coding MGP_WSBEiJ_T0020184.1 MGP_WSBEiJ_G0015617.1 mouse_genomes_project 1 78793347 78796638 + MGP_WSBEiJ_P0020184 Kcne4 protein_coding protein_coding MGP_WSBEiJ_T0020185.1 MGP_WSBEiJ_G0015617.1 mouse_genomes_project 1 78793516 78796638 + MGP_WSBEiJ_P0020185 Kcne4 protein_coding protein_coding MGP_WSBEiJ_T0005602.1 MGP_WSBEiJ_G0004712.1 mouse_genomes_project 1 34174940 34181525 + Gm33280 lincRNA lincRNA MGP_WSBEiJ_T0005751.1 MGP_WSBEiJ_G0004823.1 mouse_genomes_project 1 92298219 92310138 + Gm28380 lincRNA lincRNA MGP_WSBEiJ_T0000427.1 MGP_WSBEiJ_G0000372.1 mouse_genomes_project 1 37654259 37655144 - TEC TEC MGP_WSBEiJ_T0022828.1 MGP_WSBEiJ_G0016177.1 mouse_genomes_project 1 175583114 175609787 + Cd84 protein_coding processed_transcript MGP_WSBEiJ_T0022829.1 MGP_WSBEiJ_G0016177.1 mouse_genomes_project 1 175583956 175598456 + MGP_WSBEiJ_P0022829 Cd84 protein_coding protein_coding MGP_WSBEiJ_T0022830.1 MGP_WSBEiJ_G0016177.1 mouse_genomes_project 1 175584024 175625129 + MGP_WSBEiJ_P0022830 Cd84 protein_coding protein_coding MGP_WSBEiJ_T0011680.1 MGP_WSBEiJ_G0009810.1 mouse_genomes_project 1 7843547 7844039 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005755.1 MGP_WSBEiJ_G0004827.1 mouse_genomes_project 1 93439529 93442499 - Gm29483 lincRNA lincRNA MGP_WSBEiJ_T0021767.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141394614 141499618 + MGP_WSBEiJ_P0021767 Dennd1b protein_coding protein_coding MGP_WSBEiJ_T0021768.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141394888 141614819 + MGP_WSBEiJ_P0021768 Dennd1b protein_coding protein_coding MGP_WSBEiJ_T0021769.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141394907 141523508 + MGP_WSBEiJ_P0021769 Dennd1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021770.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141395048 141617724 + MGP_WSBEiJ_P0021770 Dennd1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021771.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141395048 141613701 + MGP_WSBEiJ_P0021771 Dennd1b protein_coding unknown_likely_coding MGP_WSBEiJ_T0021772.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141399819 141614819 + MGP_WSBEiJ_P0021772 Dennd1b protein_coding protein_coding MGP_WSBEiJ_T0021773.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141489599 141492388 + Dennd1b protein_coding retained_intron MGP_WSBEiJ_T0021774.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141523503 141572125 + Dennd1b protein_coding retained_intron MGP_WSBEiJ_T0021775.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141561936 141614759 + Dennd1b protein_coding processed_transcript MGP_WSBEiJ_T0021776.1 MGP_WSBEiJ_G0015962.1 mouse_genomes_project 1 141569523 141612870 + Dennd1b protein_coding processed_transcript MGP_WSBEiJ_T0012039.1 MGP_WSBEiJ_G0010169.1 mouse_genomes_project 1 151786517 151790490 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000565.1 MGP_WSBEiJ_G0000510.1 mouse_genomes_project 1 124085421 124086537 + TEC TEC MGP_WSBEiJ_T0012091.1 MGP_WSBEiJ_G0010221.1 mouse_genomes_project 1 173194493 173195110 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000329.1 MGP_WSBEiJ_G0000277.1 mouse_genomes_project 1 1407088 1408586 - TEC TEC MGP_WSBEiJ_T0005931.1 MGP_WSBEiJ_G0004967.1 mouse_genomes_project 1 188020357 188085176 + Gm34068 lincRNA lincRNA MGP_WSBEiJ_T0020845.1 MGP_WSBEiJ_G0015758.1 mouse_genomes_project 1 94583978 94593412 - MGP_WSBEiJ_P0020845 Dtymk protein_coding protein_coding MGP_WSBEiJ_T0020846.1 MGP_WSBEiJ_G0015758.1 mouse_genomes_project 1 94584126 94590479 - MGP_WSBEiJ_P0020846 Dtymk protein_coding protein_coding MGP_WSBEiJ_T0020847.1 MGP_WSBEiJ_G0015758.1 mouse_genomes_project 1 94589857 94590839 - Dtymk protein_coding processed_transcript MGP_WSBEiJ_T0020848.1 MGP_WSBEiJ_G0015758.1 mouse_genomes_project 1 94591541 94593384 - MGP_WSBEiJ_P0020848 Dtymk protein_coding protein_coding MGP_WSBEiJ_T0022319.1 MGP_WSBEiJ_G0016061.1 mouse_genomes_project 1 164873605 164884228 + MGP_WSBEiJ_P0022319 Tnfsf18 protein_coding protein_coding MGP_WSBEiJ_T0011822.1 MGP_WSBEiJ_G0009952.1 mouse_genomes_project 1 56253857 56254834 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023574.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196752221 196794859 - MGP_WSBEiJ_P0023574 Rcor3 protein_coding protein_coding MGP_WSBEiJ_T0023575.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196752431 196794850 - MGP_WSBEiJ_P0023575 Rcor3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023576.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196754240 196771043 - MGP_WSBEiJ_P0023576 Rcor3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023577.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196754467 196794717 - MGP_WSBEiJ_P0023577 Rcor3 protein_coding protein_coding MGP_WSBEiJ_T0023578.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196754563 196778618 - MGP_WSBEiJ_P0023578 Rcor3 protein_coding protein_coding MGP_WSBEiJ_T0023579.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196755044 196794746 - MGP_WSBEiJ_P0023579 Rcor3 protein_coding protein_coding MGP_WSBEiJ_T0023580.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196759842 196762509 - Rcor3 protein_coding retained_intron MGP_WSBEiJ_T0023581.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196783834 196787247 - Rcor3 protein_coding retained_intron MGP_WSBEiJ_T0023582.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196783978 196793645 - MGP_WSBEiJ_P0023582 Rcor3 protein_coding protein_coding MGP_WSBEiJ_T0023583.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196790186 196794854 - Rcor3 protein_coding retained_intron MGP_WSBEiJ_T0023584.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196792386 196794829 - Rcor3 protein_coding processed_transcript MGP_WSBEiJ_T0023585.1 MGP_WSBEiJ_G0016358.1 mouse_genomes_project 1 196792677 196794843 - Rcor3 protein_coding processed_transcript MGP_WSBEiJ_T0005671.1 MGP_WSBEiJ_G0004760.1 mouse_genomes_project 1 62397741 62399620 + Ino80dos lincRNA lincRNA MGP_WSBEiJ_T0005672.1 MGP_WSBEiJ_G0004760.1 mouse_genomes_project 1 62398759 62399991 + Ino80dos lincRNA lincRNA MGP_WSBEiJ_T0005673.1 MGP_WSBEiJ_G0004760.1 mouse_genomes_project 1 62399399 62444781 + Ino80dos lincRNA lincRNA MGP_WSBEiJ_T0011915.1 MGP_WSBEiJ_G0010045.1 mouse_genomes_project 1 96083163 96084011 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011911.1 MGP_WSBEiJ_G0010041.1 mouse_genomes_project 1 93147121 93147532 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011788.1 MGP_WSBEiJ_G0009918.1 mouse_genomes_project 1 47154559 47154772 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005630.1 MGP_WSBEiJ_G0004726.1 mouse_genomes_project 1 41224343 41226516 + Dalir lincRNA lincRNA MGP_WSBEiJ_T0002690.1 MGP_WSBEiJ_G0002569.1 mouse_genomes_project 1 11962118 11987093 + Gm9947 antisense antisense MGP_WSBEiJ_T0002691.1 MGP_WSBEiJ_G0002569.1 mouse_genomes_project 1 11964633 11967553 + Gm9947 antisense antisense MGP_WSBEiJ_T0096874.1 MGP_WSBEiJ_G0035555.1 mouse_genomes_project 1 28901805 28901943 - Gm27362 rRNA rRNA MGP_WSBEiJ_T0005859.1 MGP_WSBEiJ_G0004910.1 mouse_genomes_project 1 157300148 157309034 - lincRNA lincRNA MGP_WSBEiJ_T0005806.1 MGP_WSBEiJ_G0004866.1 mouse_genomes_project 1 126169787 126539096 - lincRNA lincRNA MGP_WSBEiJ_T0019449.1 MGP_WSBEiJ_G0015486.1 mouse_genomes_project 1 59063383 59139244 + MGP_WSBEiJ_P0019449 Fam117b protein_coding protein_coding MGP_WSBEiJ_T0019450.1 MGP_WSBEiJ_G0015486.1 mouse_genomes_project 1 59123603 59135401 + MGP_WSBEiJ_P0019450 Fam117b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019451.1 MGP_WSBEiJ_G0015486.1 mouse_genomes_project 1 59133066 59134824 + Fam117b protein_coding retained_intron MGP_WSBEiJ_T0019329.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57438655 57454511 - MGP_WSBEiJ_P0019329 Ppil3 protein_coding protein_coding MGP_WSBEiJ_T0019330.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57438655 57454506 - MGP_WSBEiJ_P0019330 Ppil3 protein_coding protein_coding MGP_WSBEiJ_T0019331.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57438658 57454563 - MGP_WSBEiJ_P0019331 Ppil3 protein_coding protein_coding MGP_WSBEiJ_T0019332.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57438680 57439846 - Ppil3 protein_coding processed_transcript MGP_WSBEiJ_T0019333.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57441448 57454446 - MGP_WSBEiJ_P0019333 Ppil3 protein_coding protein_coding MGP_WSBEiJ_T0019334.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57442076 57454516 - MGP_WSBEiJ_P0019334 Ppil3 protein_coding protein_coding MGP_WSBEiJ_T0019335.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57442080 57454559 - MGP_WSBEiJ_P0019335 Ppil3 protein_coding protein_coding MGP_WSBEiJ_T0019336.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57446329 57454253 - Ppil3 protein_coding retained_intron MGP_WSBEiJ_T0019337.1 MGP_WSBEiJ_G0015466.1 mouse_genomes_project 1 57446983 57449112 - Ppil3 protein_coding retained_intron MGP_WSBEiJ_T0020407.1 MGP_WSBEiJ_G0015665.1 mouse_genomes_project 1 86804259 86845292 - Pde6d protein_coding retained_intron MGP_WSBEiJ_T0020408.1 MGP_WSBEiJ_G0015665.1 mouse_genomes_project 1 86804259 86845292 - MGP_WSBEiJ_P0020408 Pde6d protein_coding protein_coding MGP_WSBEiJ_T0020409.1 MGP_WSBEiJ_G0015665.1 mouse_genomes_project 1 86804287 86845374 - MGP_WSBEiJ_P0020409 Pde6d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020410.1 MGP_WSBEiJ_G0015665.1 mouse_genomes_project 1 86804785 86845262 - Pde6d protein_coding processed_transcript MGP_WSBEiJ_T0020411.1 MGP_WSBEiJ_G0015665.1 mouse_genomes_project 1 86806656 86845292 - MGP_WSBEiJ_P0020411 Pde6d protein_coding protein_coding MGP_WSBEiJ_T0011708.1 MGP_WSBEiJ_G0009838.1 mouse_genomes_project 1 18807673 18807869 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005711.1 MGP_WSBEiJ_G0004788.1 mouse_genomes_project 1 76362170 76374447 + Gm17751 lincRNA lincRNA MGP_WSBEiJ_T0005712.1 MGP_WSBEiJ_G0004788.1 mouse_genomes_project 1 76362170 76375032 + Gm17751 lincRNA lincRNA MGP_WSBEiJ_T0005727.1 MGP_WSBEiJ_G0004800.1 mouse_genomes_project 1 83180568 83181525 - Krtap28-10 lincRNA lincRNA MGP_WSBEiJ_T0021754.1 MGP_WSBEiJ_G0015958.1 mouse_genomes_project 1 140701550 140717276 + MGP_WSBEiJ_P0021754 Atp6v1g3 protein_coding protein_coding MGP_WSBEiJ_T0018305.1 MGP_WSBEiJ_G0015256.1 mouse_genomes_project 1 10292214 10308357 - MGP_WSBEiJ_P0018305 Prdm14 protein_coding protein_coding MGP_WSBEiJ_T0000733.1 MGP_WSBEiJ_G0000675.1 mouse_genomes_project 1 184315709 184318381 - TEC TEC MGP_WSBEiJ_T0097581.1 MGP_WSBEiJ_G0036244.1 mouse_genomes_project 1 147206368 147206475 - Gm23672 snRNA snRNA MGP_WSBEiJ_T0096894.1 MGP_WSBEiJ_G0035575.1 mouse_genomes_project 1 190490843 190490949 + Gm23821 rRNA rRNA MGP_WSBEiJ_T0002806.1 MGP_WSBEiJ_G0002656.1 mouse_genomes_project 1 123007488 123011396 - Gm15392 antisense antisense MGP_WSBEiJ_T0000698.1 MGP_WSBEiJ_G0000641.1 mouse_genomes_project 1 168329861 168333382 - TEC TEC MGP_WSBEiJ_T0011935.1 MGP_WSBEiJ_G0010065.1 mouse_genomes_project 1 105736662 105737468 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005674.1 MGP_WSBEiJ_G0004761.1 mouse_genomes_project 1 62401776 62412244 + Gm20342 lincRNA lincRNA MGP_WSBEiJ_T0097184.1 MGP_WSBEiJ_G0035865.1 mouse_genomes_project 1 88132006 88132271 + Scarna6 scaRNA scaRNA MGP_WSBEiJ_T0020437.1 MGP_WSBEiJ_G0015674.1 mouse_genomes_project 1 87503719 87504879 + Chrnd protein_coding retained_intron MGP_WSBEiJ_T0020438.1 MGP_WSBEiJ_G0015674.1 mouse_genomes_project 1 87503749 87518658 + MGP_WSBEiJ_P0020438 Chrnd protein_coding protein_coding MGP_WSBEiJ_T0020439.1 MGP_WSBEiJ_G0015674.1 mouse_genomes_project 1 87503956 87518657 + MGP_WSBEiJ_P0020439 Chrnd protein_coding protein_coding MGP_WSBEiJ_T0000399.1 MGP_WSBEiJ_G0000345.1 mouse_genomes_project 1 28610455 28613472 - TEC TEC MGP_WSBEiJ_T0000739.1 MGP_WSBEiJ_G0000681.1 mouse_genomes_project 1 185962836 185966647 - TEC TEC MGP_WSBEiJ_T0018938.1 MGP_WSBEiJ_G0015390.1 mouse_genomes_project 1 41438729 41441013 + Gpr45 protein_coding processed_transcript MGP_WSBEiJ_T0018939.1 MGP_WSBEiJ_G0015390.1 mouse_genomes_project 1 41438820 41525129 + MGP_WSBEiJ_P0018939 Gpr45 protein_coding protein_coding MGP_WSBEiJ_T0018940.1 MGP_WSBEiJ_G0015390.1 mouse_genomes_project 1 41438996 41520322 + Gpr45 protein_coding processed_transcript MGP_WSBEiJ_T0018941.1 MGP_WSBEiJ_G0015390.1 mouse_genomes_project 1 41439039 41439736 + Gpr45 protein_coding processed_transcript MGP_WSBEiJ_T0018942.1 MGP_WSBEiJ_G0015390.1 mouse_genomes_project 1 41521733 41523279 + MGP_WSBEiJ_P0018942 Gpr45 protein_coding protein_coding MGP_WSBEiJ_T0011844.1 MGP_WSBEiJ_G0009974.1 mouse_genomes_project 1 61215374 61215652 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022189.1 MGP_WSBEiJ_G0016041.1 mouse_genomes_project 1 160691468 160753497 + MGP_WSBEiJ_P0022189 Sec16b protein_coding protein_coding MGP_WSBEiJ_T0022190.1 MGP_WSBEiJ_G0016041.1 mouse_genomes_project 1 160691550 160753500 + MGP_WSBEiJ_P0022190 Sec16b protein_coding protein_coding MGP_WSBEiJ_T0022191.1 MGP_WSBEiJ_G0016041.1 mouse_genomes_project 1 160710655 160753497 + MGP_WSBEiJ_P0022191 Sec16b protein_coding protein_coding MGP_WSBEiJ_T0022192.1 MGP_WSBEiJ_G0016041.1 mouse_genomes_project 1 160717597 160746969 + MGP_WSBEiJ_P0022192 Sec16b protein_coding protein_coding MGP_WSBEiJ_T0022193.1 MGP_WSBEiJ_G0016041.1 mouse_genomes_project 1 160722517 160728011 + Sec16b protein_coding retained_intron MGP_WSBEiJ_T0018691.1 MGP_WSBEiJ_G0015342.1 mouse_genomes_project 1 34613890 34623596 - MGP_WSBEiJ_P0018691 Sema4c protein_coding protein_coding MGP_WSBEiJ_T0018692.1 MGP_WSBEiJ_G0015342.1 mouse_genomes_project 1 34613893 34623596 - MGP_WSBEiJ_P0018692 Sema4c protein_coding protein_coding MGP_WSBEiJ_T0018693.1 MGP_WSBEiJ_G0015342.1 mouse_genomes_project 1 34613893 34622772 - MGP_WSBEiJ_P0018693 Sema4c protein_coding protein_coding MGP_WSBEiJ_T0018694.1 MGP_WSBEiJ_G0015342.1 mouse_genomes_project 1 34613893 34622803 - MGP_WSBEiJ_P0018694 Sema4c protein_coding protein_coding MGP_WSBEiJ_T0018695.1 MGP_WSBEiJ_G0015342.1 mouse_genomes_project 1 34616975 34618144 - Sema4c protein_coding retained_intron MGP_WSBEiJ_T0018696.1 MGP_WSBEiJ_G0015342.1 mouse_genomes_project 1 34618473 34619476 - Sema4c protein_coding retained_intron MGP_WSBEiJ_T0018697.1 MGP_WSBEiJ_G0015342.1 mouse_genomes_project 1 34619645 34622780 - MGP_WSBEiJ_P0018697 Sema4c protein_coding protein_coding MGP_WSBEiJ_T0018698.1 MGP_WSBEiJ_G0015342.1 mouse_genomes_project 1 34621177 34623497 - MGP_WSBEiJ_P0018698 Sema4c protein_coding protein_coding MGP_WSBEiJ_T0020877.1 MGP_WSBEiJ_G0015771.1 mouse_genomes_project 1 98616116 98626173 - Ppip5k2 protein_coding retained_intron MGP_WSBEiJ_T0020878.1 MGP_WSBEiJ_G0015771.1 mouse_genomes_project 1 98616116 98681713 - MGP_WSBEiJ_P0020878 Ppip5k2 protein_coding protein_coding MGP_WSBEiJ_T0020879.1 MGP_WSBEiJ_G0015771.1 mouse_genomes_project 1 98616116 98681713 - MGP_WSBEiJ_P0020879 Ppip5k2 protein_coding protein_coding MGP_WSBEiJ_T0020880.1 MGP_WSBEiJ_G0015771.1 mouse_genomes_project 1 98617732 98672914 - MGP_WSBEiJ_P0020880 Ppip5k2 protein_coding protein_coding MGP_WSBEiJ_T0020881.1 MGP_WSBEiJ_G0015771.1 mouse_genomes_project 1 98622468 98627551 - MGP_WSBEiJ_P0020881 Ppip5k2 protein_coding protein_coding MGP_WSBEiJ_T0020882.1 MGP_WSBEiJ_G0015771.1 mouse_genomes_project 1 98630272 98632723 - Ppip5k2 protein_coding retained_intron MGP_WSBEiJ_T0020883.1 MGP_WSBEiJ_G0015771.1 mouse_genomes_project 1 98653535 98657490 - Ppip5k2 protein_coding retained_intron MGP_WSBEiJ_T0011806.1 MGP_WSBEiJ_G0009936.1 mouse_genomes_project 1 51062398 51063797 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018367.1 MGP_WSBEiJ_G0015271.1 mouse_genomes_project 1 13787303 13874283 - MGP_WSBEiJ_P0018367 Ube2w protein_coding protein_coding MGP_WSBEiJ_T0018368.1 MGP_WSBEiJ_G0015271.1 mouse_genomes_project 1 13814052 13836231 - Ube2w protein_coding processed_transcript MGP_WSBEiJ_T0018369.1 MGP_WSBEiJ_G0015271.1 mouse_genomes_project 1 13819868 13874460 - MGP_WSBEiJ_P0018369 Ube2w protein_coding protein_coding MGP_WSBEiJ_T0018370.1 MGP_WSBEiJ_G0015271.1 mouse_genomes_project 1 13832768 13874230 - MGP_WSBEiJ_P0018370 Ube2w protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018371.1 MGP_WSBEiJ_G0015271.1 mouse_genomes_project 1 13834990 13874255 - Ube2w protein_coding retained_intron MGP_WSBEiJ_T0018372.1 MGP_WSBEiJ_G0015271.1 mouse_genomes_project 1 13853318 13874255 - Ube2w protein_coding retained_intron MGP_WSBEiJ_T0022002.1 MGP_WSBEiJ_G0016007.1 mouse_genomes_project 1 156509286 156564913 - MGP_WSBEiJ_P0022002 Npl protein_coding protein_coding MGP_WSBEiJ_T0022003.1 MGP_WSBEiJ_G0016007.1 mouse_genomes_project 1 156563283 156564577 - Npl protein_coding retained_intron MGP_WSBEiJ_T0021323.1 MGP_WSBEiJ_G0015867.1 mouse_genomes_project 1 133653202 133681759 + MGP_WSBEiJ_P0021323 Ctse protein_coding protein_coding MGP_WSBEiJ_T0021324.1 MGP_WSBEiJ_G0015867.1 mouse_genomes_project 1 133653390 133681757 + MGP_WSBEiJ_P0021324 Ctse protein_coding protein_coding MGP_WSBEiJ_T0021325.1 MGP_WSBEiJ_G0015867.1 mouse_genomes_project 1 133668210 133671748 + Ctse protein_coding retained_intron MGP_WSBEiJ_T0021689.1 MGP_WSBEiJ_G0015947.1 mouse_genomes_project 1 138370355 138439497 + MGP_WSBEiJ_P0021689 Cacna1s protein_coding protein_coding MGP_WSBEiJ_T0021690.1 MGP_WSBEiJ_G0015947.1 mouse_genomes_project 1 138370389 138439502 + MGP_WSBEiJ_P0021690 Cacna1s protein_coding protein_coding MGP_WSBEiJ_T0021691.1 MGP_WSBEiJ_G0015947.1 mouse_genomes_project 1 138370506 138439789 + MGP_WSBEiJ_P0021691 Cacna1s protein_coding protein_coding MGP_WSBEiJ_T0021692.1 MGP_WSBEiJ_G0015947.1 mouse_genomes_project 1 138391479 138439496 + MGP_WSBEiJ_P0021692 Cacna1s protein_coding protein_coding MGP_WSBEiJ_T0021693.1 MGP_WSBEiJ_G0015947.1 mouse_genomes_project 1 138425301 138431936 + Cacna1s protein_coding retained_intron MGP_WSBEiJ_T0021694.1 MGP_WSBEiJ_G0015947.1 mouse_genomes_project 1 138437222 138439496 + Cacna1s protein_coding processed_transcript MGP_WSBEiJ_T0000460.1 MGP_WSBEiJ_G0000405.1 mouse_genomes_project 1 60193517 60196008 + TEC TEC MGP_WSBEiJ_T0096877.1 MGP_WSBEiJ_G0035558.1 mouse_genomes_project 1 77044210 77044304 + Gm25974 rRNA rRNA MGP_WSBEiJ_T0011914.1 MGP_WSBEiJ_G0010044.1 mouse_genomes_project 1 95019637 95020479 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018415.1 MGP_WSBEiJ_G0015284.1 mouse_genomes_project 1 17413590 17951972 - MGP_WSBEiJ_P0018415 Pkhd1 protein_coding protein_coding MGP_WSBEiJ_T0018416.1 MGP_WSBEiJ_G0015284.1 mouse_genomes_project 1 17554216 17951860 - MGP_WSBEiJ_P0018416 Pkhd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0018417.1 MGP_WSBEiJ_G0015284.1 mouse_genomes_project 1 17718886 17759135 - Pkhd1 protein_coding processed_transcript MGP_WSBEiJ_T0018418.1 MGP_WSBEiJ_G0015284.1 mouse_genomes_project 1 17926887 17951972 - Pkhd1 protein_coding retained_intron MGP_WSBEiJ_T0018419.1 MGP_WSBEiJ_G0015284.1 mouse_genomes_project 1 17939476 17951948 - Pkhd1 protein_coding processed_transcript MGP_WSBEiJ_T0000553.1 MGP_WSBEiJ_G0000498.1 mouse_genomes_project 1 107361107 107366060 + TEC TEC MGP_WSBEiJ_T0009401.1 MGP_WSBEiJ_G0007558.1 mouse_genomes_project 1 169187378 169187518 + Gm44458 miRNA miRNA MGP_WSBEiJ_T0002731.1 MGP_WSBEiJ_G0002601.1 mouse_genomes_project 1 42273562 42275497 - Gm29155 antisense antisense MGP_WSBEiJ_T0002732.1 MGP_WSBEiJ_G0002601.1 mouse_genomes_project 1 42275185 42275454 - Gm29155 antisense antisense MGP_WSBEiJ_T0022553.1 MGP_WSBEiJ_G0016110.1 mouse_genomes_project 1 169712281 169741002 - MGP_WSBEiJ_P0022553 Mael protein_coding protein_coding MGP_WSBEiJ_T0022554.1 MGP_WSBEiJ_G0016110.1 mouse_genomes_project 1 169712465 169740999 - MGP_WSBEiJ_P0022554 Mael protein_coding protein_coding MGP_WSBEiJ_T0011881.1 MGP_WSBEiJ_G0010011.1 mouse_genomes_project 1 77487760 77488052 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011646.1 MGP_WSBEiJ_G0009776.1 mouse_genomes_project 1 1573575 1577009 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000611.1 MGP_WSBEiJ_G0000555.1 mouse_genomes_project 1 137811226 137813472 - TEC TEC MGP_WSBEiJ_T0005734.1 MGP_WSBEiJ_G0004807.1 mouse_genomes_project 1 89035891 89047366 + Gm19589 lincRNA lincRNA MGP_WSBEiJ_T0000325.1 MGP_WSBEiJ_G0000273.1 mouse_genomes_project 1 541279 543336 - TEC TEC MGP_WSBEiJ_T0012111.1 MGP_WSBEiJ_G0010241.1 mouse_genomes_project 1 185084198 185084647 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011932.1 MGP_WSBEiJ_G0010062.1 mouse_genomes_project 1 105392509 105392816 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099981.1 MGP_WSBEiJ_G0038635.1 mouse_genomes_project 1 176219697 176237325 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099982.1 MGP_WSBEiJ_G0038635.1 mouse_genomes_project 1 176236389 176237243 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0000421.1 MGP_WSBEiJ_G0000366.1 mouse_genomes_project 1 35457217 35457751 - TEC TEC MGP_WSBEiJ_T0097567.1 MGP_WSBEiJ_G0036230.1 mouse_genomes_project 1 124073358 124073507 + Gm24547 snRNA snRNA MGP_WSBEiJ_T0021058.1 MGP_WSBEiJ_G0015808.1 mouse_genomes_project 1 120969750 120972574 + MGP_WSBEiJ_P0021058 Tmem185b protein_coding protein_coding MGP_WSBEiJ_T0021059.1 MGP_WSBEiJ_G0015808.1 mouse_genomes_project 1 120969763 120970820 + Tmem185b protein_coding processed_transcript MGP_WSBEiJ_T0000734.1 MGP_WSBEiJ_G0000676.1 mouse_genomes_project 1 184534260 184541613 + TEC TEC MGP_WSBEiJ_T0019060.1 MGP_WSBEiJ_G0015416.1 mouse_genomes_project 1 49639543 49654129 + Tmeff2 protein_coding processed_transcript MGP_WSBEiJ_T0019061.1 MGP_WSBEiJ_G0015416.1 mouse_genomes_project 1 49639543 49657102 + Tmeff2 protein_coding processed_transcript MGP_WSBEiJ_T0019062.1 MGP_WSBEiJ_G0015416.1 mouse_genomes_project 1 49650160 49723875 + MGP_WSBEiJ_P0019062 Tmeff2 protein_coding protein_coding MGP_WSBEiJ_T0019063.1 MGP_WSBEiJ_G0015416.1 mouse_genomes_project 1 49669066 49938482 + MGP_WSBEiJ_P0019063 Tmeff2 protein_coding protein_coding MGP_WSBEiJ_T0021170.1 MGP_WSBEiJ_G0015832.1 mouse_genomes_project 1 129274631 129465499 - MGP_WSBEiJ_P0021170 Tmem163 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021171.1 MGP_WSBEiJ_G0015832.1 mouse_genomes_project 1 129274643 129465424 - MGP_WSBEiJ_P0021171 Tmem163 protein_coding protein_coding MGP_WSBEiJ_T0021172.1 MGP_WSBEiJ_G0015832.1 mouse_genomes_project 1 129278971 129466927 - MGP_WSBEiJ_P0021172 Tmem163 protein_coding protein_coding MGP_WSBEiJ_T0021173.1 MGP_WSBEiJ_G0015832.1 mouse_genomes_project 1 129279434 129289534 - Tmem163 protein_coding retained_intron MGP_WSBEiJ_T0021174.1 MGP_WSBEiJ_G0015832.1 mouse_genomes_project 1 129279618 129328044 - Tmem163 protein_coding processed_transcript MGP_WSBEiJ_T0022549.1 MGP_WSBEiJ_G0016109.1 mouse_genomes_project 1 169632608 169671972 + MGP_WSBEiJ_P0022549 Gpa33 protein_coding protein_coding MGP_WSBEiJ_T0022550.1 MGP_WSBEiJ_G0016109.1 mouse_genomes_project 1 169632710 169662991 + MGP_WSBEiJ_P0022550 Gpa33 protein_coding protein_coding MGP_WSBEiJ_T0022551.1 MGP_WSBEiJ_G0016109.1 mouse_genomes_project 1 169632787 169659602 + Gpa33 protein_coding processed_transcript MGP_WSBEiJ_T0022552.1 MGP_WSBEiJ_G0016109.1 mouse_genomes_project 1 169632837 169671971 + MGP_WSBEiJ_P0022552 Gpa33 protein_coding protein_coding MGP_WSBEiJ_T0005803.1 MGP_WSBEiJ_G0004863.1 mouse_genomes_project 1 122725212 122728482 + Gm29359 lincRNA lincRNA MGP_WSBEiJ_T0097571.1 MGP_WSBEiJ_G0036234.1 mouse_genomes_project 1 132555642 132555749 - Gm23623 snRNA snRNA MGP_WSBEiJ_T0000726.1 MGP_WSBEiJ_G0000669.1 mouse_genomes_project 1 181165653 181168418 - TEC TEC MGP_WSBEiJ_T0022349.1 MGP_WSBEiJ_G0016067.1 mouse_genomes_project 1 165929933 165946358 - MGP_WSBEiJ_P0022349 Mettl13 protein_coding protein_coding MGP_WSBEiJ_T0022350.1 MGP_WSBEiJ_G0016067.1 mouse_genomes_project 1 165931485 165946329 - MGP_WSBEiJ_P0022350 Mettl13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022351.1 MGP_WSBEiJ_G0016067.1 mouse_genomes_project 1 165933648 165942169 - MGP_WSBEiJ_P0022351 Mettl13 protein_coding protein_coding MGP_WSBEiJ_T0022352.1 MGP_WSBEiJ_G0016067.1 mouse_genomes_project 1 165934949 165946063 - Mettl13 protein_coding processed_transcript MGP_WSBEiJ_T0022353.1 MGP_WSBEiJ_G0016067.1 mouse_genomes_project 1 165936726 165944334 - MGP_WSBEiJ_P0022353 Mettl13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022354.1 MGP_WSBEiJ_G0016067.1 mouse_genomes_project 1 165939255 165946345 - Mettl13 protein_coding retained_intron MGP_WSBEiJ_T0022355.1 MGP_WSBEiJ_G0016067.1 mouse_genomes_project 1 165941442 165946335 - Mettl13 protein_coding retained_intron MGP_WSBEiJ_T0022356.1 MGP_WSBEiJ_G0016067.1 mouse_genomes_project 1 165944634 165946336 - Mettl13 protein_coding retained_intron MGP_WSBEiJ_T0005680.1 MGP_WSBEiJ_G0004766.1 mouse_genomes_project 1 63951347 63959522 + Gm28982 lincRNA lincRNA MGP_WSBEiJ_T0000383.1 MGP_WSBEiJ_G0000329.1 mouse_genomes_project 1 22894388 22897642 - TEC TEC MGP_WSBEiJ_T0022020.1 MGP_WSBEiJ_G0016011.1 mouse_genomes_project 1 156803597 156837523 - MGP_WSBEiJ_P0022020 Rgsl1 protein_coding protein_coding MGP_WSBEiJ_T0022021.1 MGP_WSBEiJ_G0016011.1 mouse_genomes_project 1 156803602 156878110 - MGP_WSBEiJ_P0022021 Rgsl1 protein_coding protein_coding MGP_WSBEiJ_T0022022.1 MGP_WSBEiJ_G0016011.1 mouse_genomes_project 1 156803608 156857380 - MGP_WSBEiJ_P0022022 Rgsl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022023.1 MGP_WSBEiJ_G0016011.1 mouse_genomes_project 1 156805900 156816510 - Rgsl1 protein_coding processed_transcript MGP_WSBEiJ_T0022024.1 MGP_WSBEiJ_G0016011.1 mouse_genomes_project 1 156810944 156878102 - MGP_WSBEiJ_P0022024 Rgsl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022025.1 MGP_WSBEiJ_G0016011.1 mouse_genomes_project 1 156818343 156852125 - Rgsl1 protein_coding retained_intron MGP_WSBEiJ_T0022026.1 MGP_WSBEiJ_G0016011.1 mouse_genomes_project 1 156827984 156843199 - Rgsl1 protein_coding processed_transcript MGP_WSBEiJ_T0000697.1 MGP_WSBEiJ_G0000640.1 mouse_genomes_project 1 168031833 168034967 + TEC TEC MGP_WSBEiJ_T0023225.1 MGP_WSBEiJ_G0016284.1 mouse_genomes_project 1 185152058 185155824 + MGP_WSBEiJ_P0023225 Lefty1 protein_coding protein_coding MGP_WSBEiJ_T0023226.1 MGP_WSBEiJ_G0016284.1 mouse_genomes_project 1 185153956 185155036 + Lefty1 protein_coding retained_intron MGP_WSBEiJ_T0011724.1 MGP_WSBEiJ_G0009854.1 mouse_genomes_project 1 25606466 25608339 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005563.1 MGP_WSBEiJ_G0004680.1 mouse_genomes_project 1 6759927 6761255 - Gm29520 lincRNA lincRNA MGP_WSBEiJ_T0011988.1 MGP_WSBEiJ_G0010118.1 mouse_genomes_project 1 124369621 124369998 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098811.1 MGP_WSBEiJ_G0037474.1 mouse_genomes_project 1 164398304 164398385 + Snord80 snoRNA snoRNA MGP_WSBEiJ_T0021129.1 MGP_WSBEiJ_G0015825.1 mouse_genomes_project 1 124908219 125682437 - MGP_WSBEiJ_P0021129 Dpp10 protein_coding protein_coding MGP_WSBEiJ_T0021130.1 MGP_WSBEiJ_G0015825.1 mouse_genomes_project 1 124921423 125682044 - MGP_WSBEiJ_P0021130 Dpp10 protein_coding protein_coding MGP_WSBEiJ_T0021131.1 MGP_WSBEiJ_G0015825.1 mouse_genomes_project 1 125216986 125266984 - Dpp10 protein_coding processed_transcript MGP_WSBEiJ_T0021132.1 MGP_WSBEiJ_G0015825.1 mouse_genomes_project 1 125239365 125682136 - Dpp10 protein_coding processed_transcript MGP_WSBEiJ_T0000731.1 MGP_WSBEiJ_G0000673.1 mouse_genomes_project 1 182419098 182420969 + TEC TEC MGP_WSBEiJ_T0022082.1 MGP_WSBEiJ_G0016024.1 mouse_genomes_project 1 158891645 158895034 - Qsox1 protein_coding retained_intron MGP_WSBEiJ_T0022083.1 MGP_WSBEiJ_G0016024.1 mouse_genomes_project 1 158893774 158930188 - MGP_WSBEiJ_P0022083 Qsox1 protein_coding protein_coding MGP_WSBEiJ_T0022084.1 MGP_WSBEiJ_G0016024.1 mouse_genomes_project 1 158893775 158930150 - MGP_WSBEiJ_P0022084 Qsox1 protein_coding protein_coding MGP_WSBEiJ_T0022085.1 MGP_WSBEiJ_G0016024.1 mouse_genomes_project 1 158893778 158930143 - MGP_WSBEiJ_P0022085 Qsox1 protein_coding protein_coding MGP_WSBEiJ_T0022086.1 MGP_WSBEiJ_G0016024.1 mouse_genomes_project 1 158895529 158897610 - Qsox1 protein_coding processed_transcript MGP_WSBEiJ_T0022087.1 MGP_WSBEiJ_G0016024.1 mouse_genomes_project 1 158910730 158930119 - Qsox1 protein_coding retained_intron MGP_WSBEiJ_T0022088.1 MGP_WSBEiJ_G0016024.1 mouse_genomes_project 1 158910904 158911979 - Qsox1 protein_coding retained_intron MGP_WSBEiJ_T0022089.1 MGP_WSBEiJ_G0016024.1 mouse_genomes_project 1 158917990 158930137 - Qsox1 protein_coding retained_intron MGP_WSBEiJ_T0020347.1 MGP_WSBEiJ_G0015651.1 mouse_genomes_project 1 86098469 86112910 + MGP_WSBEiJ_P0020347 Itm2c protein_coding protein_coding MGP_WSBEiJ_T0020348.1 MGP_WSBEiJ_G0015651.1 mouse_genomes_project 1 86098807 86112593 + MGP_WSBEiJ_P0020348 Itm2c protein_coding protein_coding MGP_WSBEiJ_T0020349.1 MGP_WSBEiJ_G0015651.1 mouse_genomes_project 1 86110394 86112025 + Itm2c protein_coding retained_intron MGP_WSBEiJ_T0011667.1 MGP_WSBEiJ_G0009797.1 mouse_genomes_project 1 4681901 4683996 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000696.1 MGP_WSBEiJ_G0000639.1 mouse_genomes_project 1 167870367 167873368 + TEC TEC MGP_WSBEiJ_T0011910.1 MGP_WSBEiJ_G0010040.1 mouse_genomes_project 1 92165292 92167562 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000712.1 MGP_WSBEiJ_G0000655.1 mouse_genomes_project 1 176656701 176657549 + TEC TEC MGP_WSBEiJ_T0022415.1 MGP_WSBEiJ_G0016082.1 mouse_genomes_project 1 167354706 167385163 + MGP_WSBEiJ_P0022415 Scyl3 protein_coding protein_coding MGP_WSBEiJ_T0022416.1 MGP_WSBEiJ_G0016082.1 mouse_genomes_project 1 167355371 167385587 + MGP_WSBEiJ_P0022416 Scyl3 protein_coding protein_coding MGP_WSBEiJ_T0022417.1 MGP_WSBEiJ_G0016082.1 mouse_genomes_project 1 167355396 167385571 + MGP_WSBEiJ_P0022417 Scyl3 protein_coding protein_coding MGP_WSBEiJ_T0022418.1 MGP_WSBEiJ_G0016082.1 mouse_genomes_project 1 167355411 167385570 + MGP_WSBEiJ_P0022418 Scyl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022419.1 MGP_WSBEiJ_G0016082.1 mouse_genomes_project 1 167366726 167385575 + MGP_WSBEiJ_P0022419 Scyl3 protein_coding protein_coding MGP_WSBEiJ_T0022420.1 MGP_WSBEiJ_G0016082.1 mouse_genomes_project 1 167369382 167370456 + Scyl3 protein_coding processed_transcript MGP_WSBEiJ_T0022422.1 MGP_WSBEiJ_G0016082.1 mouse_genomes_project 1 167376826 167384263 + Scyl3 protein_coding retained_intron MGP_WSBEiJ_T0005839.1 MGP_WSBEiJ_G0004894.1 mouse_genomes_project 1 140613157 140615060 - Gm28556 lincRNA lincRNA MGP_WSBEiJ_T0019514.1 MGP_WSBEiJ_G0015497.1 mouse_genomes_project 1 60868168 61316856 + Pard3b protein_coding processed_transcript MGP_WSBEiJ_T0019515.1 MGP_WSBEiJ_G0015497.1 mouse_genomes_project 1 60868168 61911607 + MGP_WSBEiJ_P0019515 Pard3b protein_coding protein_coding MGP_WSBEiJ_T0019516.1 MGP_WSBEiJ_G0015497.1 mouse_genomes_project 1 60868219 61000747 + Pard3b protein_coding retained_intron MGP_WSBEiJ_T0019517.1 MGP_WSBEiJ_G0015497.1 mouse_genomes_project 1 60868230 61435332 + Pard3b protein_coding retained_intron MGP_WSBEiJ_T0019518.1 MGP_WSBEiJ_G0015497.1 mouse_genomes_project 1 60868587 61907272 + MGP_WSBEiJ_P0019518 Pard3b protein_coding protein_coding MGP_WSBEiJ_T0019519.1 MGP_WSBEiJ_G0015497.1 mouse_genomes_project 1 60868587 61911607 + MGP_WSBEiJ_P0019519 Pard3b protein_coding protein_coding MGP_WSBEiJ_T0097540.1 MGP_WSBEiJ_G0036203.1 mouse_genomes_project 1 60701371 60701474 + Gm25839 snRNA snRNA MGP_WSBEiJ_T0100439.1 MGP_WSBEiJ_G0038898.1 mouse_genomes_project 1 180848403 180848563 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0020270.1 MGP_WSBEiJ_G0015635.1 mouse_genomes_project 1 83148611 83177058 - MGP_WSBEiJ_P0020270 Slc19a3 protein_coding protein_coding MGP_WSBEiJ_T0020271.1 MGP_WSBEiJ_G0015635.1 mouse_genomes_project 1 83148612 83157944 - Slc19a3 protein_coding processed_transcript MGP_WSBEiJ_T0020272.1 MGP_WSBEiJ_G0015635.1 mouse_genomes_project 1 83149888 83177041 - MGP_WSBEiJ_P0020272 Slc19a3 protein_coding protein_coding MGP_WSBEiJ_T0023249.1 MGP_WSBEiJ_G0016290.1 mouse_genomes_project 1 185413616 185457082 - MGP_WSBEiJ_P0023249 Wdr26 protein_coding protein_coding MGP_WSBEiJ_T0023250.1 MGP_WSBEiJ_G0016290.1 mouse_genomes_project 1 185413620 185456967 - MGP_WSBEiJ_P0023250 Wdr26 protein_coding protein_coding MGP_WSBEiJ_T0023251.1 MGP_WSBEiJ_G0016290.1 mouse_genomes_project 1 185418769 185456956 - MGP_WSBEiJ_P0023251 Wdr26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023252.1 MGP_WSBEiJ_G0016290.1 mouse_genomes_project 1 185419347 185426474 - MGP_WSBEiJ_P0023252 Wdr26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023253.1 MGP_WSBEiJ_G0016290.1 mouse_genomes_project 1 185422082 185425947 - MGP_WSBEiJ_P0023253 Wdr26 protein_coding protein_coding MGP_WSBEiJ_T0023254.1 MGP_WSBEiJ_G0016290.1 mouse_genomes_project 1 185423982 185426604 - Wdr26 protein_coding processed_transcript MGP_WSBEiJ_T0023255.1 MGP_WSBEiJ_G0016290.1 mouse_genomes_project 1 185430840 185435814 - Wdr26 protein_coding retained_intron MGP_WSBEiJ_T0023256.1 MGP_WSBEiJ_G0016290.1 mouse_genomes_project 1 185442838 185446940 - Wdr26 protein_coding retained_intron MGP_WSBEiJ_T0020706.1 MGP_WSBEiJ_G0015731.1 mouse_genomes_project 1 93329231 93330240 + MGP_WSBEiJ_P0020706 Olfr1410 protein_coding protein_coding MGP_WSBEiJ_T0020707.1 MGP_WSBEiJ_G0015731.1 mouse_genomes_project 1 93329231 93330200 + MGP_WSBEiJ_P0020707 Olfr1410 protein_coding protein_coding MGP_WSBEiJ_T0023683.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199878546 199927507 - MGP_WSBEiJ_P0023683 Cr2 protein_coding protein_coding MGP_WSBEiJ_T0023684.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199878546 199927506 - MGP_WSBEiJ_P0023684 Cr2 protein_coding protein_coding MGP_WSBEiJ_T0023685.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199878552 199908062 - MGP_WSBEiJ_P0023685 Cr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023686.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199881058 199902547 - Cr2 protein_coding retained_intron MGP_WSBEiJ_T0023687.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199881388 199927401 - MGP_WSBEiJ_P0023687 Cr2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023688.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199881398 199899260 - MGP_WSBEiJ_P0023688 Cr2 protein_coding protein_coding MGP_WSBEiJ_T0023689.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199881418 199927439 - MGP_WSBEiJ_P0023689 Cr2 protein_coding protein_coding MGP_WSBEiJ_T0023690.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199912912 199919228 - Cr2 protein_coding processed_transcript MGP_WSBEiJ_T0023691.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199915459 199921979 - MGP_WSBEiJ_P0023691 Cr2 protein_coding protein_coding MGP_WSBEiJ_T0023692.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199915546 199927506 - Cr2 protein_coding processed_transcript MGP_WSBEiJ_T0023693.1 MGP_WSBEiJ_G0016375.1 mouse_genomes_project 1 199921455 199927506 - Cr2 protein_coding processed_transcript MGP_WSBEiJ_T0005954.1 MGP_WSBEiJ_G0004983.1 mouse_genomes_project 1 191158384 191164142 + A430105J06Rik lincRNA lincRNA MGP_WSBEiJ_T0097486.1 MGP_WSBEiJ_G0036154.1 mouse_genomes_project 1 41164538 41218397 + Gm20646 sense_overlapping sense_overlapping MGP_WSBEiJ_T0097487.1 MGP_WSBEiJ_G0036154.1 mouse_genomes_project 1 41164538 41214572 + Gm20646 sense_overlapping sense_overlapping MGP_WSBEiJ_T0020177.1 MGP_WSBEiJ_G0015616.1 mouse_genomes_project 1 78630110 78643996 + MGP_WSBEiJ_P0020177 Utp14b protein_coding protein_coding MGP_WSBEiJ_T0020178.1 MGP_WSBEiJ_G0015616.1 mouse_genomes_project 1 78630512 78639692 + MGP_WSBEiJ_P0020178 Utp14b protein_coding protein_coding MGP_WSBEiJ_T0022942.1 MGP_WSBEiJ_G0016203.1 mouse_genomes_project 1 176672374 176673455 - MGP_WSBEiJ_P0022942 Apcs protein_coding protein_coding MGP_WSBEiJ_T0000636.1 MGP_WSBEiJ_G0000579.1 mouse_genomes_project 1 144063383 144064655 + TEC TEC MGP_WSBEiJ_T0019891.1 MGP_WSBEiJ_G0015571.1 mouse_genomes_project 1 74452058 74455894 + MGP_WSBEiJ_P0019891 Bcs1l protein_coding protein_coding MGP_WSBEiJ_T0019892.1 MGP_WSBEiJ_G0015571.1 mouse_genomes_project 1 74452069 74456234 + MGP_WSBEiJ_P0019892 Bcs1l protein_coding protein_coding MGP_WSBEiJ_T0019893.1 MGP_WSBEiJ_G0015571.1 mouse_genomes_project 1 74452143 74455959 + MGP_WSBEiJ_P0019893 Bcs1l protein_coding protein_coding MGP_WSBEiJ_T0019894.1 MGP_WSBEiJ_G0015571.1 mouse_genomes_project 1 74454035 74454678 + Bcs1l protein_coding retained_intron MGP_WSBEiJ_T0000653.1 MGP_WSBEiJ_G0000596.1 mouse_genomes_project 1 156259130 156262468 - TEC TEC MGP_WSBEiJ_T0009395.1 MGP_WSBEiJ_G0007552.1 mouse_genomes_project 1 161736007 161736116 + Mir488 miRNA miRNA MGP_WSBEiJ_T0022766.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174984859 174998978 + MGP_WSBEiJ_P0022766 Dedd protein_coding protein_coding MGP_WSBEiJ_T0022767.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174985113 174998972 + MGP_WSBEiJ_P0022767 Dedd protein_coding protein_coding MGP_WSBEiJ_T0022768.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174985122 174998333 + MGP_WSBEiJ_P0022768 Dedd protein_coding protein_coding MGP_WSBEiJ_T0022769.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174985280 174996947 + MGP_WSBEiJ_P0022769 Dedd protein_coding protein_coding MGP_WSBEiJ_T0022770.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174985321 174997602 + MGP_WSBEiJ_P0022770 Dedd protein_coding protein_coding MGP_WSBEiJ_T0022771.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174986773 174995062 + MGP_WSBEiJ_P0022771 Dedd protein_coding protein_coding MGP_WSBEiJ_T0022772.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174987050 174994991 + MGP_WSBEiJ_P0022772 Dedd protein_coding protein_coding MGP_WSBEiJ_T0022773.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174988114 174998267 + MGP_WSBEiJ_P0022773 Dedd protein_coding protein_coding MGP_WSBEiJ_T0022774.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174993461 174996784 + Dedd protein_coding retained_intron MGP_WSBEiJ_T0022775.1 MGP_WSBEiJ_G0016162.1 mouse_genomes_project 1 174994635 174996877 + MGP_WSBEiJ_P0022775 Dedd protein_coding protein_coding MGP_WSBEiJ_T0002770.1 MGP_WSBEiJ_G0002627.1 mouse_genomes_project 1 75086910 75092002 + Gm28294 antisense antisense MGP_WSBEiJ_T0019351.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57538592 57604414 - MGP_WSBEiJ_P0019351 Fam126b protein_coding protein_coding MGP_WSBEiJ_T0019352.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57542807 57604357 - MGP_WSBEiJ_P0019352 Fam126b protein_coding protein_coding MGP_WSBEiJ_T0019353.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57543531 57582038 - MGP_WSBEiJ_P0019353 Fam126b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019354.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57544871 57604282 - MGP_WSBEiJ_P0019354 Fam126b protein_coding protein_coding MGP_WSBEiJ_T0019355.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57568425 57604366 - MGP_WSBEiJ_P0019355 Fam126b protein_coding protein_coding MGP_WSBEiJ_T0019356.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57573354 57604355 - Fam126b protein_coding processed_transcript MGP_WSBEiJ_T0019357.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57573381 57604368 - Fam126b protein_coding retained_intron MGP_WSBEiJ_T0019358.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57578487 57581304 - Fam126b protein_coding retained_intron MGP_WSBEiJ_T0019359.1 MGP_WSBEiJ_G0015469.1 mouse_genomes_project 1 57581687 57604388 - Fam126b protein_coding retained_intron MGP_WSBEiJ_T0022640.1 MGP_WSBEiJ_G0016134.1 mouse_genomes_project 1 173827680 173851387 + MGP_WSBEiJ_P0022640 Sh2d1b2 protein_coding protein_coding MGP_WSBEiJ_T0018960.1 MGP_WSBEiJ_G0015395.1 mouse_genomes_project 1 42262198 42274180 + MGP_WSBEiJ_P0018960 1500015O10Rik protein_coding protein_coding MGP_WSBEiJ_T0011064.1 MGP_WSBEiJ_G0009221.1 mouse_genomes_project 1 176462976 176463303 - Gm22383 misc_RNA misc_RNA MGP_WSBEiJ_T0097557.1 MGP_WSBEiJ_G0036220.1 mouse_genomes_project 1 94121352 94121455 + Gm26446 snRNA snRNA MGP_WSBEiJ_T0000561.1 MGP_WSBEiJ_G0000506.1 mouse_genomes_project 1 122368476 122371584 + TEC TEC MGP_WSBEiJ_T0022852.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175827536 175867150 + MGP_WSBEiJ_P0022852 Copa protein_coding protein_coding MGP_WSBEiJ_T0022853.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175827650 175838529 + Copa protein_coding retained_intron MGP_WSBEiJ_T0022854.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175827812 175855687 + MGP_WSBEiJ_P0022854 Copa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022855.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175827838 175849256 + Copa protein_coding retained_intron MGP_WSBEiJ_T0022856.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175827839 175867155 + MGP_WSBEiJ_P0022856 Copa protein_coding protein_coding MGP_WSBEiJ_T0022857.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175840220 175846180 + Copa protein_coding processed_transcript MGP_WSBEiJ_T0022858.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175844727 175850788 + MGP_WSBEiJ_P0022858 Copa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022859.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175856960 175860327 + Copa protein_coding retained_intron MGP_WSBEiJ_T0022860.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175859094 175867153 + Copa protein_coding retained_intron MGP_WSBEiJ_T0022861.1 MGP_WSBEiJ_G0016183.1 mouse_genomes_project 1 175862971 175864211 + Copa protein_coding retained_intron MGP_WSBEiJ_T0011795.1 MGP_WSBEiJ_G0009925.1 mouse_genomes_project 1 48144952 48145392 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000497.1 MGP_WSBEiJ_G0000442.1 mouse_genomes_project 1 79756249 79758040 + TEC TEC MGP_WSBEiJ_T0005590.1 MGP_WSBEiJ_G0004702.1 mouse_genomes_project 1 31147082 31149794 - Gm37591 lincRNA lincRNA MGP_WSBEiJ_T0019942.1 MGP_WSBEiJ_G0015582.1 mouse_genomes_project 1 74793532 74826920 - MGP_WSBEiJ_P0019942 Ccdc108 protein_coding protein_coding MGP_WSBEiJ_T0019943.1 MGP_WSBEiJ_G0015582.1 mouse_genomes_project 1 74813530 74826915 - Ccdc108 protein_coding retained_intron MGP_WSBEiJ_T0019944.1 MGP_WSBEiJ_G0015582.1 mouse_genomes_project 1 74814619 74826913 - Ccdc108 protein_coding retained_intron MGP_WSBEiJ_T0000736.1 MGP_WSBEiJ_G0000678.1 mouse_genomes_project 1 184554951 184558022 + TEC TEC MGP_WSBEiJ_T0022483.1 MGP_WSBEiJ_G0016100.1 mouse_genomes_project 1 168818398 168947379 - MGP_WSBEiJ_P0022483 Dcaf6 protein_coding protein_coding MGP_WSBEiJ_T0022484.1 MGP_WSBEiJ_G0016100.1 mouse_genomes_project 1 168819012 168842644 - Dcaf6 protein_coding retained_intron MGP_WSBEiJ_T0022485.1 MGP_WSBEiJ_G0016100.1 mouse_genomes_project 1 168841703 168884757 - MGP_WSBEiJ_P0022485 Dcaf6 protein_coding protein_coding MGP_WSBEiJ_T0022486.1 MGP_WSBEiJ_G0016100.1 mouse_genomes_project 1 168842133 168884772 - MGP_WSBEiJ_P0022486 Dcaf6 protein_coding protein_coding MGP_WSBEiJ_T0022487.1 MGP_WSBEiJ_G0016100.1 mouse_genomes_project 1 168863459 168947389 - Dcaf6 protein_coding processed_transcript MGP_WSBEiJ_T0097485.1 MGP_WSBEiJ_G0036153.1 mouse_genomes_project 1 20495359 20691595 - Gm29506 sense_overlapping sense_overlapping MGP_WSBEiJ_T0018196.1 MGP_WSBEiJ_G0015241.1 mouse_genomes_project 1 6717617 6746178 + MGP_WSBEiJ_P0018196 3110035E14Rik protein_coding protein_coding MGP_WSBEiJ_T0000671.1 MGP_WSBEiJ_G0000614.1 mouse_genomes_project 1 161601649 161604424 + TEC TEC MGP_WSBEiJ_T0023526.1 MGP_WSBEiJ_G0016346.1 mouse_genomes_project 1 195793571 195795805 - MGP_WSBEiJ_P0023526 Fam71a protein_coding protein_coding MGP_WSBEiJ_T0000482.1 MGP_WSBEiJ_G0000427.1 mouse_genomes_project 1 68284506 68287774 - TEC TEC MGP_WSBEiJ_T0100204.1 MGP_WSBEiJ_G0038763.1 mouse_genomes_project 1 85461565 85462458 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0097249.1 MGP_WSBEiJ_G0035929.1 mouse_genomes_project 1 140340199 140341446 + Gm26930 sense_intronic sense_intronic MGP_WSBEiJ_T0018630.1 MGP_WSBEiJ_G0015331.1 mouse_genomes_project 1 34105935 34146836 + MGP_WSBEiJ_P0018630 Hs6st1 protein_coding protein_coding MGP_WSBEiJ_T0018631.1 MGP_WSBEiJ_G0015331.1 mouse_genomes_project 1 34142077 34145367 + Hs6st1 protein_coding retained_intron MGP_WSBEiJ_T0011938.1 MGP_WSBEiJ_G0010068.1 mouse_genomes_project 1 106738162 106738779 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005906.1 MGP_WSBEiJ_G0004948.1 mouse_genomes_project 1 180254710 180258267 + Gm38101 lincRNA lincRNA MGP_WSBEiJ_T0021202.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129897142 129979573 + R3hdm1 protein_coding retained_intron MGP_WSBEiJ_T0021203.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129897162 129975570 + MGP_WSBEiJ_P0021203 R3hdm1 protein_coding protein_coding MGP_WSBEiJ_T0021204.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129897165 130035816 + MGP_WSBEiJ_P0021204 R3hdm1 protein_coding protein_coding MGP_WSBEiJ_T0021205.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129897165 129985273 + MGP_WSBEiJ_P0021205 R3hdm1 protein_coding protein_coding MGP_WSBEiJ_T0021206.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129897172 129905630 + R3hdm1 protein_coding retained_intron MGP_WSBEiJ_T0021207.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129938046 129983314 + MGP_WSBEiJ_P0021207 R3hdm1 protein_coding protein_coding MGP_WSBEiJ_T0021208.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129938069 129949418 + MGP_WSBEiJ_P0021208 R3hdm1 protein_coding protein_coding MGP_WSBEiJ_T0021209.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129947905 129975623 + MGP_WSBEiJ_P0021209 R3hdm1 protein_coding protein_coding MGP_WSBEiJ_T0021210.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129968161 129974583 + R3hdm1 protein_coding retained_intron MGP_WSBEiJ_T0021211.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129971124 129975558 + R3hdm1 protein_coding retained_intron MGP_WSBEiJ_T0021212.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129973276 129985073 + R3hdm1 protein_coding retained_intron MGP_WSBEiJ_T0021213.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129975583 129990106 + MGP_WSBEiJ_P0021213 R3hdm1 protein_coding protein_coding MGP_WSBEiJ_T0021214.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129978181 130009502 + MGP_WSBEiJ_P0021214 R3hdm1 protein_coding protein_coding MGP_WSBEiJ_T0021215.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 129989122 129993146 + R3hdm1 protein_coding retained_intron MGP_WSBEiJ_T0021216.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 130004244 130035815 + R3hdm1 protein_coding retained_intron MGP_WSBEiJ_T0021217.1 MGP_WSBEiJ_G0015838.1 mouse_genomes_project 1 130033458 130035816 + R3hdm1 protein_coding retained_intron MGP_WSBEiJ_T0012058.1 MGP_WSBEiJ_G0010188.1 mouse_genomes_project 1 158972327 158972586 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002684.1 MGP_WSBEiJ_G0002566.1 mouse_genomes_project 1 6873228 6920082 + 1700034P13Rik antisense antisense MGP_WSBEiJ_T0002685.1 MGP_WSBEiJ_G0002566.1 mouse_genomes_project 1 6873536 6919233 + 1700034P13Rik antisense antisense MGP_WSBEiJ_T0002686.1 MGP_WSBEiJ_G0002566.1 mouse_genomes_project 1 6874061 6897209 + 1700034P13Rik antisense antisense MGP_WSBEiJ_T0002687.1 MGP_WSBEiJ_G0002566.1 mouse_genomes_project 1 6874167 6897048 + 1700034P13Rik antisense antisense MGP_WSBEiJ_T0022194.1 MGP_WSBEiJ_G0016042.1 mouse_genomes_project 1 161465787 161580330 - MGP_WSBEiJ_P0022194 Brinp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022195.1 MGP_WSBEiJ_G0016042.1 mouse_genomes_project 1 161465787 161580427 - MGP_WSBEiJ_P0022195 Brinp2 protein_coding protein_coding MGP_WSBEiJ_T0022196.1 MGP_WSBEiJ_G0016042.1 mouse_genomes_project 1 161466716 161580456 - MGP_WSBEiJ_P0022196 Brinp2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022197.1 MGP_WSBEiJ_G0016042.1 mouse_genomes_project 1 161522664 161523410 - Brinp2 protein_coding processed_transcript MGP_WSBEiJ_T0022198.1 MGP_WSBEiJ_G0016042.1 mouse_genomes_project 1 161576383 161580396 - Brinp2 protein_coding retained_intron MGP_WSBEiJ_T0097578.1 MGP_WSBEiJ_G0036241.1 mouse_genomes_project 1 139599290 139599394 - Gm25609 snRNA snRNA MGP_WSBEiJ_T0009378.1 MGP_WSBEiJ_G0007535.1 mouse_genomes_project 1 106702083 106702165 + Gm22426 miRNA miRNA MGP_WSBEiJ_T0020858.1 MGP_WSBEiJ_G0015762.1 mouse_genomes_project 1 94652503 94683626 + protein_coding processed_transcript MGP_WSBEiJ_T0020859.1 MGP_WSBEiJ_G0015762.1 mouse_genomes_project 1 94652542 94686361 + MGP_WSBEiJ_P0020859 protein_coding protein_coding MGP_WSBEiJ_T0020861.1 MGP_WSBEiJ_G0015762.1 mouse_genomes_project 1 94653033 94683840 + MGP_WSBEiJ_P0020861 protein_coding protein_coding MGP_WSBEiJ_T0011733.1 MGP_WSBEiJ_G0009863.1 mouse_genomes_project 1 29554160 29554995 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019722.1 MGP_WSBEiJ_G0015537.1 mouse_genomes_project 1 69442708 69877380 + Spag16 protein_coding processed_transcript MGP_WSBEiJ_T0019723.1 MGP_WSBEiJ_G0015537.1 mouse_genomes_project 1 69442709 69877281 + Spag16 protein_coding processed_transcript MGP_WSBEiJ_T0019724.1 MGP_WSBEiJ_G0015537.1 mouse_genomes_project 1 69442726 70383709 + MGP_WSBEiJ_P0019724 Spag16 protein_coding protein_coding MGP_WSBEiJ_T0019725.1 MGP_WSBEiJ_G0015537.1 mouse_genomes_project 1 69442730 69544081 + MGP_WSBEiJ_P0019725 Spag16 protein_coding protein_coding MGP_WSBEiJ_T0019726.1 MGP_WSBEiJ_G0015537.1 mouse_genomes_project 1 69447391 69491797 + Spag16 protein_coding processed_transcript MGP_WSBEiJ_T0019727.1 MGP_WSBEiJ_G0015537.1 mouse_genomes_project 1 69563503 70383709 + Spag16 protein_coding processed_transcript MGP_WSBEiJ_T0019728.1 MGP_WSBEiJ_G0015537.1 mouse_genomes_project 1 69563530 69892149 + Spag16 protein_coding processed_transcript MGP_WSBEiJ_T0022832.1 MGP_WSBEiJ_G0016179.1 mouse_genomes_project 1 175657808 175691329 + MGP_WSBEiJ_P0022832 Slamf6 protein_coding protein_coding MGP_WSBEiJ_T0022833.1 MGP_WSBEiJ_G0016179.1 mouse_genomes_project 1 175657830 175682052 + MGP_WSBEiJ_P0022833 Slamf6 protein_coding protein_coding MGP_WSBEiJ_T0022834.1 MGP_WSBEiJ_G0016179.1 mouse_genomes_project 1 175657975 175658973 + Slamf6 protein_coding retained_intron MGP_WSBEiJ_T0022835.1 MGP_WSBEiJ_G0016179.1 mouse_genomes_project 1 175658001 175686217 + MGP_WSBEiJ_P0022835 Slamf6 protein_coding protein_coding MGP_WSBEiJ_T0022836.1 MGP_WSBEiJ_G0016179.1 mouse_genomes_project 1 175659784 175672313 + MGP_WSBEiJ_P0022836 Slamf6 protein_coding protein_coding MGP_WSBEiJ_T0022837.1 MGP_WSBEiJ_G0016179.1 mouse_genomes_project 1 175669730 175672650 + Slamf6 protein_coding retained_intron MGP_WSBEiJ_T0022838.1 MGP_WSBEiJ_G0016179.1 mouse_genomes_project 1 175680768 175687006 + Slamf6 protein_coding processed_transcript MGP_WSBEiJ_T0021444.1 MGP_WSBEiJ_G0015892.1 mouse_genomes_project 1 135336455 135395842 + MGP_WSBEiJ_P0021444 Plekha6 protein_coding protein_coding MGP_WSBEiJ_T0021445.1 MGP_WSBEiJ_G0015892.1 mouse_genomes_project 1 135345778 135395846 + MGP_WSBEiJ_P0021445 Plekha6 protein_coding protein_coding MGP_WSBEiJ_T0021446.1 MGP_WSBEiJ_G0015892.1 mouse_genomes_project 1 135349697 135393623 + MGP_WSBEiJ_P0021446 Plekha6 protein_coding protein_coding MGP_WSBEiJ_T0021447.1 MGP_WSBEiJ_G0015892.1 mouse_genomes_project 1 135361301 135364179 + Plekha6 protein_coding processed_transcript MGP_WSBEiJ_T0021448.1 MGP_WSBEiJ_G0015892.1 mouse_genomes_project 1 135366092 135373656 + MGP_WSBEiJ_P0021448 Plekha6 protein_coding protein_coding MGP_WSBEiJ_T0021449.1 MGP_WSBEiJ_G0015892.1 mouse_genomes_project 1 135366098 135376798 + MGP_WSBEiJ_P0021449 Plekha6 protein_coding protein_coding MGP_WSBEiJ_T0021450.1 MGP_WSBEiJ_G0015892.1 mouse_genomes_project 1 135384167 135386643 + Plekha6 protein_coding retained_intron MGP_WSBEiJ_T0021451.1 MGP_WSBEiJ_G0015892.1 mouse_genomes_project 1 135390355 135394024 + Plekha6 protein_coding retained_intron MGP_WSBEiJ_T0011718.1 MGP_WSBEiJ_G0009848.1 mouse_genomes_project 1 22734479 22734922 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005617.1 MGP_WSBEiJ_G0004723.1 mouse_genomes_project 1 40705924 40706323 + lincRNA lincRNA MGP_WSBEiJ_T0023462.1 MGP_WSBEiJ_G0016334.1 mouse_genomes_project 1 194180628 194228880 - MGP_WSBEiJ_P0023462 Cenpf protein_coding protein_coding MGP_WSBEiJ_T0023463.1 MGP_WSBEiJ_G0016334.1 mouse_genomes_project 1 194182723 194188884 - MGP_WSBEiJ_P0023463 Cenpf protein_coding protein_coding MGP_WSBEiJ_T0023464.1 MGP_WSBEiJ_G0016334.1 mouse_genomes_project 1 194199531 194228880 - MGP_WSBEiJ_P0023464 Cenpf protein_coding protein_coding MGP_WSBEiJ_T0023465.1 MGP_WSBEiJ_G0016334.1 mouse_genomes_project 1 194208468 194211865 - Cenpf protein_coding retained_intron MGP_WSBEiJ_T0023466.1 MGP_WSBEiJ_G0016334.1 mouse_genomes_project 1 194224589 194228829 - MGP_WSBEiJ_P0023466 Cenpf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023467.1 MGP_WSBEiJ_G0016334.1 mouse_genomes_project 1 194227849 194228880 - Cenpf protein_coding retained_intron MGP_WSBEiJ_T0021960.1 MGP_WSBEiJ_G0015999.1 mouse_genomes_project 1 155705685 155715366 + MGP_WSBEiJ_P0021960 Arpc5 protein_coding protein_coding MGP_WSBEiJ_T0021961.1 MGP_WSBEiJ_G0015999.1 mouse_genomes_project 1 155708660 155714560 + Arpc5 protein_coding retained_intron MGP_WSBEiJ_T0005875.1 MGP_WSBEiJ_G0004921.1 mouse_genomes_project 1 165282171 165293210 + Gm31925 lincRNA lincRNA MGP_WSBEiJ_T0002836.1 MGP_WSBEiJ_G0002679.1 mouse_genomes_project 1 143067608 143154987 - 4930590L20Rik antisense antisense MGP_WSBEiJ_T0022670.1 MGP_WSBEiJ_G0016145.1 mouse_genomes_project 1 174597643 174617101 - MGP_WSBEiJ_P0022670 Fcgr2b protein_coding protein_coding MGP_WSBEiJ_T0022671.1 MGP_WSBEiJ_G0016145.1 mouse_genomes_project 1 174599657 174617101 - MGP_WSBEiJ_P0022671 Fcgr2b protein_coding protein_coding MGP_WSBEiJ_T0022672.1 MGP_WSBEiJ_G0016145.1 mouse_genomes_project 1 174599831 174600728 - Fcgr2b protein_coding processed_transcript MGP_WSBEiJ_T0022673.1 MGP_WSBEiJ_G0016145.1 mouse_genomes_project 1 174599866 174617537 - MGP_WSBEiJ_P0022673 Fcgr2b protein_coding protein_coding MGP_WSBEiJ_T0022674.1 MGP_WSBEiJ_G0016145.1 mouse_genomes_project 1 174600090 174617101 - MGP_WSBEiJ_P0022674 Fcgr2b protein_coding protein_coding MGP_WSBEiJ_T0022675.1 MGP_WSBEiJ_G0016145.1 mouse_genomes_project 1 174604238 174617101 - Fcgr2b protein_coding retained_intron MGP_WSBEiJ_T0022676.1 MGP_WSBEiJ_G0016145.1 mouse_genomes_project 1 174609161 174617101 - Fcgr2b protein_coding retained_intron MGP_WSBEiJ_T0000425.1 MGP_WSBEiJ_G0000370.1 mouse_genomes_project 1 36967795 36968299 + TEC TEC MGP_WSBEiJ_T0022602.1 MGP_WSBEiJ_G0016125.1 mouse_genomes_project 1 171667282 171993439 - MGP_WSBEiJ_P0022602 Pbx1 protein_coding protein_coding MGP_WSBEiJ_T0022603.1 MGP_WSBEiJ_G0016125.1 mouse_genomes_project 1 171703005 171993376 - MGP_WSBEiJ_P0022603 Pbx1 protein_coding protein_coding MGP_WSBEiJ_T0022604.1 MGP_WSBEiJ_G0016125.1 mouse_genomes_project 1 171707794 171993376 - MGP_WSBEiJ_P0022604 Pbx1 protein_coding protein_coding MGP_WSBEiJ_T0022605.1 MGP_WSBEiJ_G0016125.1 mouse_genomes_project 1 171707834 171714169 - Pbx1 protein_coding processed_transcript MGP_WSBEiJ_T0022606.1 MGP_WSBEiJ_G0016125.1 mouse_genomes_project 1 171708196 171993145 - MGP_WSBEiJ_P0022606 Pbx1 protein_coding protein_coding MGP_WSBEiJ_T0022607.1 MGP_WSBEiJ_G0016125.1 mouse_genomes_project 1 171758842 171993301 - Pbx1 protein_coding retained_intron MGP_WSBEiJ_T0022608.1 MGP_WSBEiJ_G0016125.1 mouse_genomes_project 1 171986076 171993376 - Pbx1 protein_coding retained_intron MGP_WSBEiJ_T0021855.1 MGP_WSBEiJ_G0015981.1 mouse_genomes_project 1 152646581 152756012 - MGP_WSBEiJ_P0021855 Pla2g4a protein_coding protein_coding MGP_WSBEiJ_T0021856.1 MGP_WSBEiJ_G0015981.1 mouse_genomes_project 1 152646592 152745163 - MGP_WSBEiJ_P0021856 Pla2g4a protein_coding protein_coding MGP_WSBEiJ_T0021857.1 MGP_WSBEiJ_G0015981.1 mouse_genomes_project 1 152707605 152791101 - MGP_WSBEiJ_P0021857 Pla2g4a protein_coding protein_coding MGP_WSBEiJ_T0021858.1 MGP_WSBEiJ_G0015981.1 mouse_genomes_project 1 152707645 152724093 - Pla2g4a protein_coding processed_transcript MGP_WSBEiJ_T0021859.1 MGP_WSBEiJ_G0015981.1 mouse_genomes_project 1 152741602 152791127 - Pla2g4a protein_coding retained_intron MGP_WSBEiJ_T0021860.1 MGP_WSBEiJ_G0015981.1 mouse_genomes_project 1 152755814 152791098 - Pla2g4a protein_coding processed_transcript MGP_WSBEiJ_T0000392.1 MGP_WSBEiJ_G0000338.1 mouse_genomes_project 1 23332558 23336145 - TEC TEC MGP_WSBEiJ_T0009322.1 MGP_WSBEiJ_G0007479.1 mouse_genomes_project 1 18026760 18026879 + Mir133b miRNA miRNA MGP_WSBEiJ_T0012000.1 MGP_WSBEiJ_G0010130.1 mouse_genomes_project 1 130344893 130345200 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002897.1 MGP_WSBEiJ_G0002728.1 mouse_genomes_project 1 184939730 184952425 - Gm37768 antisense antisense MGP_WSBEiJ_T0005903.1 MGP_WSBEiJ_G0004945.1 mouse_genomes_project 1 174976527 174982097 - Gm20045 lincRNA lincRNA MGP_WSBEiJ_T0009399.1 MGP_WSBEiJ_G0007556.1 mouse_genomes_project 1 165614757 165614867 + Mir214 miRNA miRNA MGP_WSBEiJ_T0021979.1 MGP_WSBEiJ_G0016003.1 mouse_genomes_project 1 156083200 156153287 - MGP_WSBEiJ_P0021979 Lamc2 protein_coding protein_coding MGP_WSBEiJ_T0021980.1 MGP_WSBEiJ_G0016003.1 mouse_genomes_project 1 156083200 156152887 - MGP_WSBEiJ_P0021980 Lamc2 protein_coding protein_coding MGP_WSBEiJ_T0021981.1 MGP_WSBEiJ_G0016003.1 mouse_genomes_project 1 156084617 156087700 - Lamc2 protein_coding retained_intron MGP_WSBEiJ_T0021982.1 MGP_WSBEiJ_G0016003.1 mouse_genomes_project 1 156086563 156089468 - MGP_WSBEiJ_P0021982 Lamc2 protein_coding protein_coding MGP_WSBEiJ_T0021983.1 MGP_WSBEiJ_G0016003.1 mouse_genomes_project 1 156112657 156114536 - Lamc2 protein_coding retained_intron MGP_WSBEiJ_T0021984.1 MGP_WSBEiJ_G0016003.1 mouse_genomes_project 1 156119956 156153287 - Lamc2 protein_coding retained_intron MGP_WSBEiJ_T0000701.1 MGP_WSBEiJ_G0000644.1 mouse_genomes_project 1 169069767 169070576 + TEC TEC MGP_WSBEiJ_T0012123.1 MGP_WSBEiJ_G0010253.1 mouse_genomes_project 1 191428484 191429082 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011949.1 MGP_WSBEiJ_G0010079.1 mouse_genomes_project 1 110252839 110253966 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016429.1 MGP_WSBEiJ_G0014528.1 mouse_genomes_project 1 134516481 134527991 - 6030442K20Rik processed_transcript antisense MGP_WSBEiJ_T0016430.1 MGP_WSBEiJ_G0014528.1 mouse_genomes_project 1 134527004 134528010 - 6030442K20Rik processed_transcript retained_intron MGP_WSBEiJ_T0019158.1 MGP_WSBEiJ_G0015431.1 mouse_genomes_project 1 51979558 52087452 - MGP_WSBEiJ_P0019158 protein_coding protein_coding MGP_WSBEiJ_T0019159.1 MGP_WSBEiJ_G0015431.1 mouse_genomes_project 1 51988802 52087451 - MGP_WSBEiJ_P0019159 protein_coding protein_coding MGP_WSBEiJ_T0019160.1 MGP_WSBEiJ_G0015431.1 mouse_genomes_project 1 52049231 52087401 - protein_coding processed_transcript MGP_WSBEiJ_T0019161.1 MGP_WSBEiJ_G0015431.1 mouse_genomes_project 1 52062358 52087409 - MGP_WSBEiJ_P0019161 protein_coding protein_coding MGP_WSBEiJ_T0019162.1 MGP_WSBEiJ_G0015431.1 mouse_genomes_project 1 52069647 52077230 - MGP_WSBEiJ_P0019162 protein_coding protein_coding MGP_WSBEiJ_T0019163.1 MGP_WSBEiJ_G0015431.1 mouse_genomes_project 1 52069669 52087449 - MGP_WSBEiJ_P0019163 protein_coding protein_coding MGP_WSBEiJ_T0019164.1 MGP_WSBEiJ_G0015431.1 mouse_genomes_project 1 52076768 52087449 - MGP_WSBEiJ_P0019164 protein_coding protein_coding MGP_WSBEiJ_T0019165.1 MGP_WSBEiJ_G0015431.1 mouse_genomes_project 1 52085716 52087449 - protein_coding retained_intron MGP_WSBEiJ_T0018929.1 MGP_WSBEiJ_G0015387.1 mouse_genomes_project 1 39112161 39162466 + MGP_WSBEiJ_P0018929 Tmem182 protein_coding protein_coding MGP_WSBEiJ_T0000589.1 MGP_WSBEiJ_G0000534.1 mouse_genomes_project 1 131572328 131575015 + TEC TEC MGP_WSBEiJ_T0016405.1 MGP_WSBEiJ_G0014518.1 mouse_genomes_project 1 62491614 62498906 + Platr12 processed_transcript antisense MGP_WSBEiJ_T0016406.1 MGP_WSBEiJ_G0014518.1 mouse_genomes_project 1 62492009 62499259 + Platr12 processed_transcript lincRNA MGP_WSBEiJ_T0018115.1 MGP_WSBEiJ_G0015228.1 mouse_genomes_project 1 1863177 1947896 + MGP_WSBEiJ_P0018115 Gm37988 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021263.1 MGP_WSBEiJ_G0015851.1 mouse_genomes_project 1 132697601 132711559 + MGP_WSBEiJ_P0021263 AA986860 protein_coding protein_coding MGP_WSBEiJ_T0021264.1 MGP_WSBEiJ_G0015851.1 mouse_genomes_project 1 132697735 132709400 + AA986860 protein_coding processed_transcript MGP_WSBEiJ_T0021265.1 MGP_WSBEiJ_G0015851.1 mouse_genomes_project 1 132707209 132711558 + AA986860 protein_coding retained_intron MGP_WSBEiJ_T0097596.1 MGP_WSBEiJ_G0036259.1 mouse_genomes_project 1 179762673 179762849 + Gm25560 snRNA snRNA MGP_WSBEiJ_T0097546.1 MGP_WSBEiJ_G0036209.1 mouse_genomes_project 1 67919966 67920060 - Gm25542 snRNA snRNA MGP_WSBEiJ_T0000664.1 MGP_WSBEiJ_G0000607.1 mouse_genomes_project 1 159806785 159807185 + TEC TEC MGP_WSBEiJ_T0097558.1 MGP_WSBEiJ_G0036221.1 mouse_genomes_project 1 94600010 94600112 - Gm22089 snRNA snRNA MGP_WSBEiJ_T0005593.1 MGP_WSBEiJ_G0004705.1 mouse_genomes_project 1 32441686 32451898 - 4930568A12Rik lincRNA lincRNA MGP_WSBEiJ_T0005594.1 MGP_WSBEiJ_G0004705.1 mouse_genomes_project 1 32447260 32452220 - 4930568A12Rik lincRNA lincRNA MGP_WSBEiJ_T0011671.1 MGP_WSBEiJ_G0009801.1 mouse_genomes_project 1 5905959 5906157 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011987.1 MGP_WSBEiJ_G0010117.1 mouse_genomes_project 1 123736839 123737674 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005879.1 MGP_WSBEiJ_G0004925.1 mouse_genomes_project 1 167910104 167911651 + Gm32391 lincRNA lincRNA MGP_WSBEiJ_T0012115.1 MGP_WSBEiJ_G0010245.1 mouse_genomes_project 1 185660276 185660573 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020975.1 MGP_WSBEiJ_G0015793.1 mouse_genomes_project 1 108618951 108658187 + MGP_WSBEiJ_P0020975 Serpinb7 protein_coding protein_coding MGP_WSBEiJ_T0020976.1 MGP_WSBEiJ_G0015793.1 mouse_genomes_project 1 108643932 108676522 + MGP_WSBEiJ_P0020976 Serpinb7 protein_coding protein_coding MGP_WSBEiJ_T0097525.1 MGP_WSBEiJ_G0036188.1 mouse_genomes_project 1 22986314 22986418 + Gm25294 snRNA snRNA MGP_WSBEiJ_T0005892.1 MGP_WSBEiJ_G0004935.1 mouse_genomes_project 1 169510065 169545685 + Gm26665 lincRNA lincRNA MGP_WSBEiJ_T0021474.1 MGP_WSBEiJ_G0015900.1 mouse_genomes_project 1 135732510 135740606 - MGP_WSBEiJ_P0021474 Snrpe protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021475.1 MGP_WSBEiJ_G0015900.1 mouse_genomes_project 1 135732635 135740776 - MGP_WSBEiJ_P0021475 Snrpe protein_coding protein_coding MGP_WSBEiJ_T0021476.1 MGP_WSBEiJ_G0015900.1 mouse_genomes_project 1 135734700 135740808 - MGP_WSBEiJ_P0021476 Snrpe protein_coding protein_coding MGP_WSBEiJ_T0021477.1 MGP_WSBEiJ_G0015900.1 mouse_genomes_project 1 135735136 135740484 - MGP_WSBEiJ_P0021477 Snrpe protein_coding protein_coding MGP_WSBEiJ_T0021478.1 MGP_WSBEiJ_G0015900.1 mouse_genomes_project 1 135737480 135740774 - MGP_WSBEiJ_P0021478 Snrpe protein_coding protein_coding MGP_WSBEiJ_T0005648.1 MGP_WSBEiJ_G0004741.1 mouse_genomes_project 1 51354462 51365037 - Gm28178 lincRNA lincRNA MGP_WSBEiJ_T0018420.1 MGP_WSBEiJ_G0015285.1 mouse_genomes_project 1 18079313 18082904 + MGP_WSBEiJ_P0018420 Il17a protein_coding protein_coding MGP_WSBEiJ_T0011828.1 MGP_WSBEiJ_G0009958.1 mouse_genomes_project 1 57849640 57850091 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022600.1 MGP_WSBEiJ_G0016124.1 mouse_genomes_project 1 171212864 171376117 + MGP_WSBEiJ_P0022600 Lmx1a protein_coding protein_coding MGP_WSBEiJ_T0022601.1 MGP_WSBEiJ_G0016124.1 mouse_genomes_project 1 171213184 171376117 + MGP_WSBEiJ_P0022601 Lmx1a protein_coding protein_coding MGP_WSBEiJ_T0000546.1 MGP_WSBEiJ_G0000491.1 mouse_genomes_project 1 100796668 100799377 + TEC TEC MGP_WSBEiJ_T0097246.1 MGP_WSBEiJ_G0035926.1 mouse_genomes_project 1 106698155 106698608 - Gm28404 sense_intronic sense_intronic MGP_WSBEiJ_T0011045.1 MGP_WSBEiJ_G0009202.1 mouse_genomes_project 1 11125126 11125434 + Gm25491 misc_RNA misc_RNA MGP_WSBEiJ_T0021124.1 MGP_WSBEiJ_G0015823.1 mouse_genomes_project 1 123029569 123053444 - MGP_WSBEiJ_P0021124 Htr5b protein_coding protein_coding MGP_WSBEiJ_T0100386.1 MGP_WSBEiJ_G0038845.1 mouse_genomes_project 1 18759541 18760653 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011869.1 MGP_WSBEiJ_G0009999.1 mouse_genomes_project 1 70711442 70711821 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005771.1 MGP_WSBEiJ_G0004840.1 mouse_genomes_project 1 106219049 106230879 + Gm29012 lincRNA lincRNA MGP_WSBEiJ_T0011922.1 MGP_WSBEiJ_G0010052.1 mouse_genomes_project 1 100581356 100583202 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000781.1 MGP_WSBEiJ_G0000721.1 mouse_genomes_project 1 199975098 199977774 - TEC TEC MGP_WSBEiJ_T0002788.1 MGP_WSBEiJ_G0002644.1 mouse_genomes_project 1 93574738 93582420 - Gm29480 antisense antisense MGP_WSBEiJ_T0000420.1 MGP_WSBEiJ_G0000365.1 mouse_genomes_project 1 35423335 35423681 - TEC TEC MGP_WSBEiJ_T0011809.1 MGP_WSBEiJ_G0009939.1 mouse_genomes_project 1 51666988 51667850 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000694.1 MGP_WSBEiJ_G0000637.1 mouse_genomes_project 1 166510806 166512788 + TEC TEC MGP_WSBEiJ_T0005607.1 MGP_WSBEiJ_G0004717.1 mouse_genomes_project 1 38108185 38115353 - 1700066B17Rik lincRNA lincRNA MGP_WSBEiJ_T0005608.1 MGP_WSBEiJ_G0004717.1 mouse_genomes_project 1 38111464 38116984 - 1700066B17Rik lincRNA lincRNA MGP_WSBEiJ_T0005609.1 MGP_WSBEiJ_G0004717.1 mouse_genomes_project 1 38111469 38116988 - 1700066B17Rik lincRNA lincRNA MGP_WSBEiJ_T0098740.1 MGP_WSBEiJ_G0037403.1 mouse_genomes_project 1 22042261 22042398 - Gm26418 snoRNA snoRNA MGP_WSBEiJ_T0000756.1 MGP_WSBEiJ_G0000697.1 mouse_genomes_project 1 191506873 191509857 - TEC TEC MGP_WSBEiJ_T0021331.1 MGP_WSBEiJ_G0015870.1 mouse_genomes_project 1 133802695 133828078 + MGP_WSBEiJ_P0021331 Pm20d1 protein_coding protein_coding MGP_WSBEiJ_T0021332.1 MGP_WSBEiJ_G0015870.1 mouse_genomes_project 1 133802712 133828090 + MGP_WSBEiJ_P0021332 Pm20d1 protein_coding protein_coding MGP_WSBEiJ_T0021333.1 MGP_WSBEiJ_G0015870.1 mouse_genomes_project 1 133817478 133822721 + MGP_WSBEiJ_P0021333 Pm20d1 protein_coding protein_coding MGP_WSBEiJ_T0021334.1 MGP_WSBEiJ_G0015870.1 mouse_genomes_project 1 133817516 133817754 + Pm20d1 protein_coding processed_transcript MGP_WSBEiJ_T0020078.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75212115 75269034 + MGP_WSBEiJ_P0020078 Speg protein_coding protein_coding MGP_WSBEiJ_T0020079.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75218924 75225162 + MGP_WSBEiJ_P0020079 Speg protein_coding protein_coding MGP_WSBEiJ_T0020080.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75218924 75241418 + MGP_WSBEiJ_P0020080 Speg protein_coding protein_coding MGP_WSBEiJ_T0020081.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75218936 75220193 + Speg protein_coding retained_intron MGP_WSBEiJ_T0020082.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75218948 75224712 + MGP_WSBEiJ_P0020082 Speg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020083.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75220366 75221764 + Speg protein_coding processed_transcript MGP_WSBEiJ_T0020084.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75221488 75224765 + Speg protein_coding retained_intron MGP_WSBEiJ_T0020085.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75221616 75228763 + MGP_WSBEiJ_P0020085 Speg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020086.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75222301 75225921 + Speg protein_coding processed_transcript MGP_WSBEiJ_T0020087.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75222399 75269018 + MGP_WSBEiJ_P0020087 Speg protein_coding protein_coding MGP_WSBEiJ_T0020088.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75236951 75240845 + MGP_WSBEiJ_P0020088 Speg protein_coding protein_coding MGP_WSBEiJ_T0020089.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75237387 75241225 + MGP_WSBEiJ_P0020089 Speg protein_coding protein_coding MGP_WSBEiJ_T0020090.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75237501 75241417 + MGP_WSBEiJ_P0020090 Speg protein_coding protein_coding MGP_WSBEiJ_T0020091.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75237876 75241062 + MGP_WSBEiJ_P0020091 Speg protein_coding protein_coding MGP_WSBEiJ_T0020092.1 MGP_WSBEiJ_G0015601.1 mouse_genomes_project 1 75260272 75264337 + Speg protein_coding retained_intron MGP_WSBEiJ_T0011777.1 MGP_WSBEiJ_G0009907.1 mouse_genomes_project 1 43646161 43647101 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011705.1 MGP_WSBEiJ_G0009835.1 mouse_genomes_project 1 18169120 18170283 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021861.1 MGP_WSBEiJ_G0015982.1 mouse_genomes_project 1 152938843 152947301 + MGP_WSBEiJ_P0021861 Ptgs2 protein_coding protein_coding MGP_WSBEiJ_T0021862.1 MGP_WSBEiJ_G0015982.1 mouse_genomes_project 1 152939144 152940139 + MGP_WSBEiJ_P0021862 Ptgs2 protein_coding protein_coding MGP_WSBEiJ_T0000680.1 MGP_WSBEiJ_G0000623.1 mouse_genomes_project 1 163922008 163923267 - TEC TEC MGP_WSBEiJ_T0002707.1 MGP_WSBEiJ_G0002581.1 mouse_genomes_project 1 32581134 32581643 - 1700101I19Rik antisense antisense MGP_WSBEiJ_T0002708.1 MGP_WSBEiJ_G0002581.1 mouse_genomes_project 1 32581156 32581545 - 1700101I19Rik antisense antisense MGP_WSBEiJ_T0005569.1 MGP_WSBEiJ_G0004682.1 mouse_genomes_project 1 9817566 9818425 - Gm29663 lincRNA lincRNA MGP_WSBEiJ_T0000518.1 MGP_WSBEiJ_G0000463.1 mouse_genomes_project 1 86842800 86843975 + TEC TEC MGP_WSBEiJ_T0012125.1 MGP_WSBEiJ_G0010255.1 mouse_genomes_project 1 193594165 193596616 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011824.1 MGP_WSBEiJ_G0009954.1 mouse_genomes_project 1 56540274 56543038 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100441.1 MGP_WSBEiJ_G0038900.1 mouse_genomes_project 1 182197855 182198828 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000753.1 MGP_WSBEiJ_G0000694.1 mouse_genomes_project 1 190744307 190745418 + TEC TEC MGP_WSBEiJ_T0000748.1 MGP_WSBEiJ_G0000689.1 mouse_genomes_project 1 187249004 187251805 + TEC TEC MGP_WSBEiJ_T0000562.1 MGP_WSBEiJ_G0000507.1 mouse_genomes_project 1 122806105 122806777 - TEC TEC MGP_WSBEiJ_T0000623.1 MGP_WSBEiJ_G0000566.1 mouse_genomes_project 1 140382925 140383955 + TEC TEC MGP_WSBEiJ_T0005966.1 MGP_WSBEiJ_G0004993.1 mouse_genomes_project 1 195904041 195927795 + Gm37168 lincRNA lincRNA MGP_WSBEiJ_T0005653.1 MGP_WSBEiJ_G0004744.1 mouse_genomes_project 1 55449727 55451780 + Gm28240 lincRNA lincRNA MGP_WSBEiJ_T0022972.1 MGP_WSBEiJ_G0016218.1 mouse_genomes_project 1 177578985 177600273 - MGP_WSBEiJ_P0022972 Ifi204 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000743.1 MGP_WSBEiJ_G0000685.1 mouse_genomes_project 1 186313114 186316062 - TEC TEC MGP_WSBEiJ_T0019464.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59268493 59324926 + MGP_WSBEiJ_P0019464 Carf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019465.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59268510 59280877 + Carf protein_coding retained_intron MGP_WSBEiJ_T0019466.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59268510 59299780 + MGP_WSBEiJ_P0019466 Carf protein_coding protein_coding MGP_WSBEiJ_T0019467.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59271475 59274684 + Carf protein_coding retained_intron MGP_WSBEiJ_T0019468.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59272119 59327867 + MGP_WSBEiJ_P0019468 Carf protein_coding unknown_likely_coding MGP_WSBEiJ_T0019469.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59278317 59324694 + MGP_WSBEiJ_P0019469 Carf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019470.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59278317 59324694 + MGP_WSBEiJ_P0019470 Carf protein_coding protein_coding MGP_WSBEiJ_T0019471.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59313933 59316343 + Carf protein_coding retained_intron MGP_WSBEiJ_T0019472.1 MGP_WSBEiJ_G0015489.1 mouse_genomes_project 1 59315579 59321920 + MGP_WSBEiJ_P0019472 Carf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097232.1 MGP_WSBEiJ_G0035913.1 mouse_genomes_project 1 35014552 35017492 - Gm38115 sense_intronic sense_intronic MGP_WSBEiJ_T0000628.1 MGP_WSBEiJ_G0000571.1 mouse_genomes_project 1 141390350 141394084 - TEC TEC MGP_WSBEiJ_T0098805.1 MGP_WSBEiJ_G0037468.1 mouse_genomes_project 1 164396103 164396183 + Gm26224 snoRNA snoRNA MGP_WSBEiJ_T0019197.1 MGP_WSBEiJ_G0015441.1 mouse_genomes_project 1 53318689 53409010 - MGP_WSBEiJ_P0019197 Pgap1 protein_coding protein_coding MGP_WSBEiJ_T0019198.1 MGP_WSBEiJ_G0015441.1 mouse_genomes_project 1 53374032 53409012 - Pgap1 protein_coding retained_intron MGP_WSBEiJ_T0019199.1 MGP_WSBEiJ_G0015441.1 mouse_genomes_project 1 53375902 53379126 - Pgap1 protein_coding retained_intron MGP_WSBEiJ_T0019200.1 MGP_WSBEiJ_G0015441.1 mouse_genomes_project 1 53405931 53408955 - Pgap1 protein_coding retained_intron MGP_WSBEiJ_T0020677.1 MGP_WSBEiJ_G0015722.1 mouse_genomes_project 1 92497790 92546989 + MGP_WSBEiJ_P0020677 Twist2 protein_coding protein_coding MGP_WSBEiJ_T0020678.1 MGP_WSBEiJ_G0015722.1 mouse_genomes_project 1 92497799 92500324 + MGP_WSBEiJ_P0020678 Twist2 protein_coding protein_coding MGP_WSBEiJ_T0021735.1 MGP_WSBEiJ_G0015956.1 mouse_genomes_project 1 139202535 139329367 - MGP_WSBEiJ_P0021735 Nr5a2 protein_coding protein_coding MGP_WSBEiJ_T0021736.1 MGP_WSBEiJ_G0015956.1 mouse_genomes_project 1 139205305 139316832 - MGP_WSBEiJ_P0021736 Nr5a2 protein_coding protein_coding MGP_WSBEiJ_T0021737.1 MGP_WSBEiJ_G0015956.1 mouse_genomes_project 1 139206343 139329299 - MGP_WSBEiJ_P0021737 Nr5a2 protein_coding protein_coding MGP_WSBEiJ_T0021738.1 MGP_WSBEiJ_G0015956.1 mouse_genomes_project 1 139206492 139320813 - MGP_WSBEiJ_P0021738 Nr5a2 protein_coding protein_coding MGP_WSBEiJ_T0021739.1 MGP_WSBEiJ_G0015956.1 mouse_genomes_project 1 139253238 139307847 - Nr5a2 protein_coding retained_intron MGP_WSBEiJ_T0021740.1 MGP_WSBEiJ_G0015956.1 mouse_genomes_project 1 139308248 139316436 - MGP_WSBEiJ_P0021740 Nr5a2 protein_coding protein_coding MGP_WSBEiJ_T0018609.1 MGP_WSBEiJ_G0015326.1 mouse_genomes_project 1 32534775 32558645 - MGP_WSBEiJ_P0018609 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023264.1 MGP_WSBEiJ_G0016294.1 mouse_genomes_project 1 186098832 186127153 - MGP_WSBEiJ_P0023264 Lbr protein_coding protein_coding MGP_WSBEiJ_T0023265.1 MGP_WSBEiJ_G0016294.1 mouse_genomes_project 1 186098853 186104033 - Lbr protein_coding retained_intron MGP_WSBEiJ_T0023266.1 MGP_WSBEiJ_G0016294.1 mouse_genomes_project 1 186103370 186113541 - MGP_WSBEiJ_P0023266 Lbr protein_coding protein_coding MGP_WSBEiJ_T0023267.1 MGP_WSBEiJ_G0016294.1 mouse_genomes_project 1 186105040 186113809 - Lbr protein_coding retained_intron MGP_WSBEiJ_T0023268.1 MGP_WSBEiJ_G0016294.1 mouse_genomes_project 1 186120811 186127820 - MGP_WSBEiJ_P0023268 Lbr protein_coding protein_coding MGP_WSBEiJ_T0023269.1 MGP_WSBEiJ_G0016294.1 mouse_genomes_project 1 186120840 186127135 - MGP_WSBEiJ_P0023269 Lbr protein_coding protein_coding MGP_WSBEiJ_T0023270.1 MGP_WSBEiJ_G0016294.1 mouse_genomes_project 1 186120991 186127633 - MGP_WSBEiJ_P0023270 Lbr protein_coding protein_coding MGP_WSBEiJ_T0023271.1 MGP_WSBEiJ_G0016294.1 mouse_genomes_project 1 186123233 186127100 - MGP_WSBEiJ_P0023271 Lbr protein_coding protein_coding MGP_WSBEiJ_T0022466.1 MGP_WSBEiJ_G0016094.1 mouse_genomes_project 1 168248062 168276473 + MGP_WSBEiJ_P0022466 Dpt protein_coding protein_coding MGP_WSBEiJ_T0021657.1 MGP_WSBEiJ_G0015941.1 mouse_genomes_project 1 138122485 138138480 + MGP_WSBEiJ_P0021657 Lad1 protein_coding protein_coding MGP_WSBEiJ_T0021658.1 MGP_WSBEiJ_G0015941.1 mouse_genomes_project 1 138135132 138137845 + Lad1 protein_coding processed_transcript MGP_WSBEiJ_T0021659.1 MGP_WSBEiJ_G0015941.1 mouse_genomes_project 1 138135671 138137600 + Lad1 protein_coding processed_transcript MGP_WSBEiJ_T0000337.1 MGP_WSBEiJ_G0000285.1 mouse_genomes_project 1 5540791 5543323 - TEC TEC MGP_WSBEiJ_T0022950.1 MGP_WSBEiJ_G0016209.1 mouse_genomes_project 1 177012180 177018108 - MGP_WSBEiJ_P0022950 Fcer1a protein_coding protein_coding MGP_WSBEiJ_T0022951.1 MGP_WSBEiJ_G0016209.1 mouse_genomes_project 1 177012289 177018088 - MGP_WSBEiJ_P0022951 Fcer1a protein_coding protein_coding MGP_WSBEiJ_T0000367.1 MGP_WSBEiJ_G0000315.1 mouse_genomes_project 1 16976830 16979184 + TEC TEC MGP_WSBEiJ_T0016495.1 MGP_WSBEiJ_G0014545.1 mouse_genomes_project 1 199719073 199765252 + A330023F24Rik processed_transcript lincRNA MGP_WSBEiJ_T0016496.1 MGP_WSBEiJ_G0014545.1 mouse_genomes_project 1 199719083 199772318 + A330023F24Rik processed_transcript retained_intron MGP_WSBEiJ_T0016497.1 MGP_WSBEiJ_G0014545.1 mouse_genomes_project 1 199761196 199781800 + A330023F24Rik processed_transcript lincRNA MGP_WSBEiJ_T0016498.1 MGP_WSBEiJ_G0014545.1 mouse_genomes_project 1 199768998 199782781 + A330023F24Rik processed_transcript retained_intron MGP_WSBEiJ_T0023235.1 MGP_WSBEiJ_G0016286.1 mouse_genomes_project 1 185196659 185219219 - MGP_WSBEiJ_P0023235 Ephx1 protein_coding protein_coding MGP_WSBEiJ_T0023236.1 MGP_WSBEiJ_G0016286.1 mouse_genomes_project 1 185212652 185240442 - MGP_WSBEiJ_P0023236 Ephx1 protein_coding protein_coding MGP_WSBEiJ_T0023237.1 MGP_WSBEiJ_G0016286.1 mouse_genomes_project 1 185212652 185240442 - MGP_WSBEiJ_P0023237 Ephx1 protein_coding protein_coding MGP_WSBEiJ_T0023238.1 MGP_WSBEiJ_G0016286.1 mouse_genomes_project 1 185219197 185243798 - MGP_WSBEiJ_P0023238 Ephx1 protein_coding protein_coding MGP_WSBEiJ_T0019630.1 MGP_WSBEiJ_G0015523.1 mouse_genomes_project 1 64518195 64538767 - MGP_WSBEiJ_P0019630 Idh1 protein_coding protein_coding MGP_WSBEiJ_T0019631.1 MGP_WSBEiJ_G0015523.1 mouse_genomes_project 1 64518197 64546061 - MGP_WSBEiJ_P0019631 Idh1 protein_coding protein_coding MGP_WSBEiJ_T0019632.1 MGP_WSBEiJ_G0015523.1 mouse_genomes_project 1 64525792 64546020 - MGP_WSBEiJ_P0019632 Idh1 protein_coding protein_coding MGP_WSBEiJ_T0019633.1 MGP_WSBEiJ_G0015523.1 mouse_genomes_project 1 64525837 64546082 - MGP_WSBEiJ_P0019633 Idh1 protein_coding protein_coding MGP_WSBEiJ_T0019634.1 MGP_WSBEiJ_G0015523.1 mouse_genomes_project 1 64528182 64535112 - MGP_WSBEiJ_P0019634 Idh1 protein_coding protein_coding MGP_WSBEiJ_T0019635.1 MGP_WSBEiJ_G0015523.1 mouse_genomes_project 1 64530710 64546041 - MGP_WSBEiJ_P0019635 Idh1 protein_coding protein_coding MGP_WSBEiJ_T0019636.1 MGP_WSBEiJ_G0015523.1 mouse_genomes_project 1 64534840 64546061 - MGP_WSBEiJ_P0019636 Idh1 protein_coding protein_coding MGP_WSBEiJ_T0005766.1 MGP_WSBEiJ_G0004836.1 mouse_genomes_project 1 99095571 99115700 + Gm29461 lincRNA lincRNA MGP_WSBEiJ_T0016407.1 MGP_WSBEiJ_G0014519.1 mouse_genomes_project 1 64016996 64027753 - 2810408I11Rik processed_transcript antisense MGP_WSBEiJ_T0016408.1 MGP_WSBEiJ_G0014519.1 mouse_genomes_project 1 64020453 64027702 - 2810408I11Rik processed_transcript antisense MGP_WSBEiJ_T0016409.1 MGP_WSBEiJ_G0014519.1 mouse_genomes_project 1 64026217 64027722 - 2810408I11Rik processed_transcript retained_intron MGP_WSBEiJ_T0023309.1 MGP_WSBEiJ_G0016302.1 mouse_genomes_project 1 186890040 186969731 + MGP_WSBEiJ_P0023309 Capn8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023310.1 MGP_WSBEiJ_G0016302.1 mouse_genomes_project 1 186890743 186937545 + Capn8 protein_coding processed_transcript MGP_WSBEiJ_T0023311.1 MGP_WSBEiJ_G0016302.1 mouse_genomes_project 1 186890748 186964731 + MGP_WSBEiJ_P0023311 Capn8 protein_coding protein_coding MGP_WSBEiJ_T0023312.1 MGP_WSBEiJ_G0016302.1 mouse_genomes_project 1 186890774 186964619 + MGP_WSBEiJ_P0023312 Capn8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011944.1 MGP_WSBEiJ_G0010074.1 mouse_genomes_project 1 109188512 109188698 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022398.1 MGP_WSBEiJ_G0016075.1 mouse_genomes_project 1 166325347 166346962 - MGP_WSBEiJ_P0022398 Fmo6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022399.1 MGP_WSBEiJ_G0016075.1 mouse_genomes_project 1 166325519 166346665 - MGP_WSBEiJ_P0022399 Fmo6 protein_coding protein_coding MGP_WSBEiJ_T0012080.1 MGP_WSBEiJ_G0010210.1 mouse_genomes_project 1 169099038 169099870 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000453.1 MGP_WSBEiJ_G0000398.1 mouse_genomes_project 1 58947409 58950846 + TEC TEC MGP_WSBEiJ_T0098822.1 MGP_WSBEiJ_G0037485.1 mouse_genomes_project 1 189582264 189582396 + Snora36b snoRNA snoRNA MGP_WSBEiJ_T0018659.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34391221 34425304 - MGP_WSBEiJ_P0018659 Kansl3 protein_coding protein_coding MGP_WSBEiJ_T0018660.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34391221 34425328 - MGP_WSBEiJ_P0018660 Kansl3 protein_coding protein_coding MGP_WSBEiJ_T0018661.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34393064 34425318 - MGP_WSBEiJ_P0018661 Kansl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018662.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34393064 34424161 - MGP_WSBEiJ_P0018662 Kansl3 protein_coding protein_coding MGP_WSBEiJ_T0018663.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34409887 34424188 - MGP_WSBEiJ_P0018663 Kansl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018664.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34414276 34425302 - MGP_WSBEiJ_P0018664 Kansl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018665.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34421781 34424188 - MGP_WSBEiJ_P0018665 Kansl3 protein_coding protein_coding MGP_WSBEiJ_T0018666.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34422063 34425304 - Kansl3 protein_coding retained_intron MGP_WSBEiJ_T0018667.1 MGP_WSBEiJ_G0015335.1 mouse_genomes_project 1 34424112 34425249 - MGP_WSBEiJ_P0018667 Kansl3 protein_coding protein_coding MGP_WSBEiJ_T0019547.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62464801 62470371 + MGP_WSBEiJ_P0019547 Eef1b2 protein_coding protein_coding MGP_WSBEiJ_T0019548.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62465105 62469247 + MGP_WSBEiJ_P0019548 Eef1b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019549.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62465106 62469541 + MGP_WSBEiJ_P0019549 Eef1b2 protein_coding protein_coding MGP_WSBEiJ_T0019550.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62465107 62466486 + Eef1b2 protein_coding processed_transcript MGP_WSBEiJ_T0019551.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62465121 62469507 + MGP_WSBEiJ_P0019551 Eef1b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019552.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62465121 62469453 + MGP_WSBEiJ_P0019552 Eef1b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019553.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62465123 62466400 + Eef1b2 protein_coding processed_transcript MGP_WSBEiJ_T0019554.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62465161 62466856 + MGP_WSBEiJ_P0019554 Eef1b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019555.1 MGP_WSBEiJ_G0015501.1 mouse_genomes_project 1 62465199 62466875 + MGP_WSBEiJ_P0019555 Eef1b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011772.1 MGP_WSBEiJ_G0009902.1 mouse_genomes_project 1 42967795 42968104 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011963.1 MGP_WSBEiJ_G0010093.1 mouse_genomes_project 1 114297662 114299052 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019952.1 MGP_WSBEiJ_G0015586.1 mouse_genomes_project 1 74965645 74973714 - MGP_WSBEiJ_P0019952 Cnppd1 protein_coding protein_coding MGP_WSBEiJ_T0019953.1 MGP_WSBEiJ_G0015586.1 mouse_genomes_project 1 74966860 74972765 - MGP_WSBEiJ_P0019953 Cnppd1 protein_coding protein_coding MGP_WSBEiJ_T0019954.1 MGP_WSBEiJ_G0015586.1 mouse_genomes_project 1 74966863 74969950 - Cnppd1 protein_coding retained_intron MGP_WSBEiJ_T0019955.1 MGP_WSBEiJ_G0015586.1 mouse_genomes_project 1 74966863 74973773 - MGP_WSBEiJ_P0019955 Cnppd1 protein_coding protein_coding MGP_WSBEiJ_T0019956.1 MGP_WSBEiJ_G0015586.1 mouse_genomes_project 1 74967877 74968949 - Cnppd1 protein_coding retained_intron MGP_WSBEiJ_T0019957.1 MGP_WSBEiJ_G0015586.1 mouse_genomes_project 1 74968184 74968894 - Cnppd1 protein_coding retained_intron MGP_WSBEiJ_T0019958.1 MGP_WSBEiJ_G0015586.1 mouse_genomes_project 1 74970420 74972877 - MGP_WSBEiJ_P0019958 Cnppd1 protein_coding protein_coding MGP_WSBEiJ_T0019959.1 MGP_WSBEiJ_G0015586.1 mouse_genomes_project 1 74970670 74973787 - MGP_WSBEiJ_P0019959 Cnppd1 protein_coding protein_coding MGP_WSBEiJ_T0000513.1 MGP_WSBEiJ_G0000458.1 mouse_genomes_project 1 84558375 84561274 - TEC TEC MGP_WSBEiJ_T0020336.1 MGP_WSBEiJ_G0015649.1 mouse_genomes_project 1 85912091 85932955 - protein_coding processed_transcript MGP_WSBEiJ_T0020337.1 MGP_WSBEiJ_G0015649.1 mouse_genomes_project 1 85912091 85979367 - MGP_WSBEiJ_P0020337 protein_coding protein_coding MGP_WSBEiJ_T0020338.1 MGP_WSBEiJ_G0015649.1 mouse_genomes_project 1 85912697 85933003 - MGP_WSBEiJ_P0020338 protein_coding protein_coding MGP_WSBEiJ_T0020339.1 MGP_WSBEiJ_G0015649.1 mouse_genomes_project 1 85912700 85932955 - MGP_WSBEiJ_P0020339 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020340.1 MGP_WSBEiJ_G0015649.1 mouse_genomes_project 1 85913098 85932933 - protein_coding processed_transcript MGP_WSBEiJ_T0020341.1 MGP_WSBEiJ_G0015649.1 mouse_genomes_project 1 85922996 85932940 - protein_coding processed_transcript MGP_WSBEiJ_T0005840.1 MGP_WSBEiJ_G0004895.1 mouse_genomes_project 1 141065887 141101149 - Gm5833 lincRNA lincRNA MGP_WSBEiJ_T0005841.1 MGP_WSBEiJ_G0004895.1 mouse_genomes_project 1 141090485 141101137 - Gm5833 lincRNA lincRNA MGP_WSBEiJ_T0019883.1 MGP_WSBEiJ_G0015570.1 mouse_genomes_project 1 74428948 74451798 - MGP_WSBEiJ_P0019883 Zfp142 protein_coding protein_coding MGP_WSBEiJ_T0019884.1 MGP_WSBEiJ_G0015570.1 mouse_genomes_project 1 74430247 74451795 - MGP_WSBEiJ_P0019884 Zfp142 protein_coding protein_coding MGP_WSBEiJ_T0019885.1 MGP_WSBEiJ_G0015570.1 mouse_genomes_project 1 74430323 74451915 - MGP_WSBEiJ_P0019885 Zfp142 protein_coding protein_coding MGP_WSBEiJ_T0019886.1 MGP_WSBEiJ_G0015570.1 mouse_genomes_project 1 74430504 74452016 - MGP_WSBEiJ_P0019886 Zfp142 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019887.1 MGP_WSBEiJ_G0015570.1 mouse_genomes_project 1 74430690 74449435 - MGP_WSBEiJ_P0019887 Zfp142 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019888.1 MGP_WSBEiJ_G0015570.1 mouse_genomes_project 1 74446000 74451965 - Zfp142 protein_coding retained_intron MGP_WSBEiJ_T0019889.1 MGP_WSBEiJ_G0015570.1 mouse_genomes_project 1 74446007 74451722 - Zfp142 protein_coding retained_intron MGP_WSBEiJ_T0019890.1 MGP_WSBEiJ_G0015570.1 mouse_genomes_project 1 74449356 74451903 - Zfp142 protein_coding processed_transcript MGP_WSBEiJ_T0012009.1 MGP_WSBEiJ_G0010139.1 mouse_genomes_project 1 136198506 136199444 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020768.1 MGP_WSBEiJ_G0015746.1 mouse_genomes_project 1 93984030 94055721 + MGP_WSBEiJ_P0020768 Sned1 protein_coding protein_coding MGP_WSBEiJ_T0020769.1 MGP_WSBEiJ_G0015746.1 mouse_genomes_project 1 93984040 94036178 + Sned1 protein_coding retained_intron MGP_WSBEiJ_T0020770.1 MGP_WSBEiJ_G0015746.1 mouse_genomes_project 1 94026124 94033988 + Sned1 protein_coding processed_transcript MGP_WSBEiJ_T0020771.1 MGP_WSBEiJ_G0015746.1 mouse_genomes_project 1 94032907 94050446 + MGP_WSBEiJ_P0020771 Sned1 protein_coding protein_coding MGP_WSBEiJ_T0020772.1 MGP_WSBEiJ_G0015746.1 mouse_genomes_project 1 94038512 94051135 + Sned1 protein_coding retained_intron MGP_WSBEiJ_T0020773.1 MGP_WSBEiJ_G0015746.1 mouse_genomes_project 1 94050353 94051257 + Sned1 protein_coding retained_intron MGP_WSBEiJ_T0000379.1 MGP_WSBEiJ_G0000325.1 mouse_genomes_project 1 22816223 22819598 - TEC TEC MGP_WSBEiJ_T0022728.1 MGP_WSBEiJ_G0016157.1 mouse_genomes_project 1 174906992 174917326 + MGP_WSBEiJ_P0022728 Adamts4 protein_coding protein_coding MGP_WSBEiJ_T0022729.1 MGP_WSBEiJ_G0016157.1 mouse_genomes_project 1 174908679 174917326 + MGP_WSBEiJ_P0022729 Adamts4 protein_coding protein_coding MGP_WSBEiJ_T0021923.1 MGP_WSBEiJ_G0015991.1 mouse_genomes_project 1 154361268 154373461 - MGP_WSBEiJ_P0021923 Rnf2 protein_coding protein_coding MGP_WSBEiJ_T0021924.1 MGP_WSBEiJ_G0015991.1 mouse_genomes_project 1 154366556 154399589 - MGP_WSBEiJ_P0021924 Rnf2 protein_coding protein_coding MGP_WSBEiJ_T0021925.1 MGP_WSBEiJ_G0015991.1 mouse_genomes_project 1 154366557 154399729 - MGP_WSBEiJ_P0021925 Rnf2 protein_coding protein_coding MGP_WSBEiJ_T0021926.1 MGP_WSBEiJ_G0015991.1 mouse_genomes_project 1 154368277 154399611 - MGP_WSBEiJ_P0021926 Rnf2 protein_coding protein_coding MGP_WSBEiJ_T0021927.1 MGP_WSBEiJ_G0015991.1 mouse_genomes_project 1 154368309 154369187 - Rnf2 protein_coding retained_intron MGP_WSBEiJ_T0021928.1 MGP_WSBEiJ_G0015991.1 mouse_genomes_project 1 154368474 154371041 - Rnf2 protein_coding processed_transcript MGP_WSBEiJ_T0021929.1 MGP_WSBEiJ_G0015991.1 mouse_genomes_project 1 154374199 154399572 - MGP_WSBEiJ_P0021929 Rnf2 protein_coding protein_coding MGP_WSBEiJ_T0012103.1 MGP_WSBEiJ_G0010233.1 mouse_genomes_project 1 180318918 180319435 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012017.1 MGP_WSBEiJ_G0010147.1 mouse_genomes_project 1 141347695 141348134 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002855.1 MGP_WSBEiJ_G0002695.1 mouse_genomes_project 1 163586386 163771215 + Gm36975 antisense antisense MGP_WSBEiJ_T0097562.1 MGP_WSBEiJ_G0036225.1 mouse_genomes_project 1 109006389 109006496 - Gm24267 snRNA snRNA MGP_WSBEiJ_T0022475.1 MGP_WSBEiJ_G0016098.1 mouse_genomes_project 1 168692523 168717746 - MGP_WSBEiJ_P0022475 Tiprl protein_coding protein_coding MGP_WSBEiJ_T0022476.1 MGP_WSBEiJ_G0016098.1 mouse_genomes_project 1 168695815 168696763 - Tiprl protein_coding retained_intron MGP_WSBEiJ_T0022477.1 MGP_WSBEiJ_G0016098.1 mouse_genomes_project 1 168695959 168717799 - MGP_WSBEiJ_P0022477 Tiprl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022478.1 MGP_WSBEiJ_G0016098.1 mouse_genomes_project 1 168702891 168717725 - Tiprl protein_coding processed_transcript MGP_WSBEiJ_T0022479.1 MGP_WSBEiJ_G0016098.1 mouse_genomes_project 1 168708296 168717321 - MGP_WSBEiJ_P0022479 Tiprl protein_coding protein_coding MGP_WSBEiJ_T0022480.1 MGP_WSBEiJ_G0016098.1 mouse_genomes_project 1 168709155 168717735 - Tiprl protein_coding processed_transcript MGP_WSBEiJ_T0019181.1 MGP_WSBEiJ_G0015437.1 mouse_genomes_project 1 52607733 52641159 - MGP_WSBEiJ_P0019181 Stk17b protein_coding protein_coding MGP_WSBEiJ_T0019182.1 MGP_WSBEiJ_G0015437.1 mouse_genomes_project 1 52614473 52616594 - Stk17b protein_coding retained_intron MGP_WSBEiJ_T0022572.1 MGP_WSBEiJ_G0016114.1 mouse_genomes_project 1 169987336 170000379 - MGP_WSBEiJ_P0022572 Gm4846 protein_coding protein_coding MGP_WSBEiJ_T0000331.1 MGP_WSBEiJ_G0000279.1 mouse_genomes_project 1 1968668 1969780 - TEC TEC MGP_WSBEiJ_T0018393.1 MGP_WSBEiJ_G0015276.1 mouse_genomes_project 1 14419565 14440929 + MGP_WSBEiJ_P0018393 Gdap1 protein_coding protein_coding MGP_WSBEiJ_T0018394.1 MGP_WSBEiJ_G0015276.1 mouse_genomes_project 1 14419607 14435407 + Gdap1 protein_coding retained_intron MGP_WSBEiJ_T0018395.1 MGP_WSBEiJ_G0015276.1 mouse_genomes_project 1 14419671 14438289 + MGP_WSBEiJ_P0018395 Gdap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018396.1 MGP_WSBEiJ_G0015276.1 mouse_genomes_project 1 14435032 14438707 + Gdap1 protein_coding retained_intron MGP_WSBEiJ_T0023113.1 MGP_WSBEiJ_G0016264.1 mouse_genomes_project 1 183685217 183703388 - MGP_WSBEiJ_P0023113 protein_coding protein_coding MGP_WSBEiJ_T0023115.1 MGP_WSBEiJ_G0016264.1 mouse_genomes_project 1 183686087 183690808 - protein_coding processed_transcript MGP_WSBEiJ_T0023116.1 MGP_WSBEiJ_G0016264.1 mouse_genomes_project 1 183686448 183690838 - protein_coding processed_transcript MGP_WSBEiJ_T0023117.1 MGP_WSBEiJ_G0016264.1 mouse_genomes_project 1 183688462 183703338 - protein_coding processed_transcript MGP_WSBEiJ_T0023118.1 MGP_WSBEiJ_G0016264.1 mouse_genomes_project 1 183690795 183703013 - protein_coding processed_transcript MGP_WSBEiJ_T0022992.1 MGP_WSBEiJ_G0016233.1 mouse_genomes_project 1 178191323 178192411 - MGP_WSBEiJ_P0022992 Olfr419 protein_coding protein_coding MGP_WSBEiJ_T0002744.1 MGP_WSBEiJ_G0002611.1 mouse_genomes_project 1 58222892 58225966 + G730003C15Rik antisense antisense MGP_WSBEiJ_T0002745.1 MGP_WSBEiJ_G0002611.1 mouse_genomes_project 1 58222892 58225968 + G730003C15Rik antisense antisense MGP_WSBEiJ_T0000417.1 MGP_WSBEiJ_G0000362.1 mouse_genomes_project 1 34536089 34538249 + TEC TEC MGP_WSBEiJ_T0000336.1 MGP_WSBEiJ_G0000284.1 mouse_genomes_project 1 4197021 4201081 + TEC TEC MGP_WSBEiJ_T0020329.1 MGP_WSBEiJ_G0015648.1 mouse_genomes_project 1 85852848 85855211 + MGP_WSBEiJ_P0020329 protein_coding protein_coding MGP_WSBEiJ_T0011645.1 MGP_WSBEiJ_G0009775.1 mouse_genomes_project 1 1294325 1296482 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020225.1 MGP_WSBEiJ_G0015626.1 mouse_genomes_project 1 81109616 81351469 + MGP_WSBEiJ_P0020225 Nyap2 protein_coding protein_coding MGP_WSBEiJ_T0020226.1 MGP_WSBEiJ_G0015626.1 mouse_genomes_project 1 81109849 81351444 + MGP_WSBEiJ_P0020226 Nyap2 protein_coding protein_coding MGP_WSBEiJ_T0020227.1 MGP_WSBEiJ_G0015626.1 mouse_genomes_project 1 81109951 81322570 + MGP_WSBEiJ_P0020227 Nyap2 protein_coding protein_coding MGP_WSBEiJ_T0020228.1 MGP_WSBEiJ_G0015626.1 mouse_genomes_project 1 81109958 81352631 + MGP_WSBEiJ_P0020228 Nyap2 protein_coding protein_coding MGP_WSBEiJ_T0020229.1 MGP_WSBEiJ_G0015626.1 mouse_genomes_project 1 81110217 81403918 + MGP_WSBEiJ_P0020229 Nyap2 protein_coding protein_coding MGP_WSBEiJ_T0000385.1 MGP_WSBEiJ_G0000331.1 mouse_genomes_project 1 23147500 23150443 - TEC TEC MGP_WSBEiJ_T0021896.1 MGP_WSBEiJ_G0015987.1 mouse_genomes_project 1 153407610 153862807 - MGP_WSBEiJ_P0021896 Hmcn1 protein_coding protein_coding MGP_WSBEiJ_T0021897.1 MGP_WSBEiJ_G0015987.1 mouse_genomes_project 1 153408624 153862807 - MGP_WSBEiJ_P0021897 Hmcn1 protein_coding protein_coding MGP_WSBEiJ_T0021898.1 MGP_WSBEiJ_G0015987.1 mouse_genomes_project 1 153408781 153428862 - MGP_WSBEiJ_P0021898 Hmcn1 protein_coding protein_coding MGP_WSBEiJ_T0021899.1 MGP_WSBEiJ_G0015987.1 mouse_genomes_project 1 153408808 153410702 - Hmcn1 protein_coding retained_intron MGP_WSBEiJ_T0021900.1 MGP_WSBEiJ_G0015987.1 mouse_genomes_project 1 153423089 153426271 - Hmcn1 protein_coding processed_transcript MGP_WSBEiJ_T0021901.1 MGP_WSBEiJ_G0015987.1 mouse_genomes_project 1 153738689 153863191 - Hmcn1 protein_coding retained_intron MGP_WSBEiJ_T0018551.1 MGP_WSBEiJ_G0015317.1 mouse_genomes_project 1 31675599 31689288 - MGP_WSBEiJ_P0018551 Bag2 protein_coding protein_coding MGP_WSBEiJ_T0018552.1 MGP_WSBEiJ_G0015317.1 mouse_genomes_project 1 31676853 31678842 - Bag2 protein_coding retained_intron MGP_WSBEiJ_T0018553.1 MGP_WSBEiJ_G0015317.1 mouse_genomes_project 1 31676916 31689234 - MGP_WSBEiJ_P0018553 Bag2 protein_coding protein_coding MGP_WSBEiJ_T0018554.1 MGP_WSBEiJ_G0015317.1 mouse_genomes_project 1 31688267 31689220 - Bag2 protein_coding retained_intron MGP_WSBEiJ_T0019573.1 MGP_WSBEiJ_G0015505.1 mouse_genomes_project 1 62951716 63016359 - MGP_WSBEiJ_P0019573 Dytn protein_coding protein_coding MGP_WSBEiJ_T0019574.1 MGP_WSBEiJ_G0015505.1 mouse_genomes_project 1 62993770 63016342 - Dytn protein_coding retained_intron MGP_WSBEiJ_T0005975.1 MGP_WSBEiJ_G0005001.1 mouse_genomes_project 1 199761690 199762041 - Gm37027 lincRNA lincRNA MGP_WSBEiJ_T0005895.1 MGP_WSBEiJ_G0004938.1 mouse_genomes_project 1 170451727 170471071 - Gm16701 lincRNA lincRNA MGP_WSBEiJ_T0000552.1 MGP_WSBEiJ_G0000497.1 mouse_genomes_project 1 107214886 107218198 - TEC TEC MGP_WSBEiJ_T0020953.1 MGP_WSBEiJ_G0015785.1 mouse_genomes_project 1 107917308 107950042 - MGP_WSBEiJ_P0020953 Vps4b protein_coding protein_coding MGP_WSBEiJ_T0020954.1 MGP_WSBEiJ_G0015785.1 mouse_genomes_project 1 107922679 107950103 - MGP_WSBEiJ_P0020954 Vps4b protein_coding protein_coding MGP_WSBEiJ_T0020955.1 MGP_WSBEiJ_G0015785.1 mouse_genomes_project 1 107930550 107936045 - Vps4b protein_coding retained_intron MGP_WSBEiJ_T0020956.1 MGP_WSBEiJ_G0015785.1 mouse_genomes_project 1 107932693 107933875 - Vps4b protein_coding retained_intron MGP_WSBEiJ_T0020957.1 MGP_WSBEiJ_G0015785.1 mouse_genomes_project 1 107939046 107943195 - Vps4b protein_coding processed_transcript MGP_WSBEiJ_T0020958.1 MGP_WSBEiJ_G0015785.1 mouse_genomes_project 1 107944345 107949952 - Vps4b protein_coding retained_intron MGP_WSBEiJ_T0011860.1 MGP_WSBEiJ_G0009990.1 mouse_genomes_project 1 65454131 65454907 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000348.1 MGP_WSBEiJ_G0000296.1 mouse_genomes_project 1 8554934 8557356 + TEC TEC MGP_WSBEiJ_T0011967.1 MGP_WSBEiJ_G0010097.1 mouse_genomes_project 1 118023610 118024016 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097603.1 MGP_WSBEiJ_G0036266.1 mouse_genomes_project 1 188893299 188893397 - Gm23349 snRNA snRNA MGP_WSBEiJ_T0022939.1 MGP_WSBEiJ_G0016201.1 mouse_genomes_project 1 176407926 176411296 - MGP_WSBEiJ_P0022939 Dusp23 protein_coding protein_coding MGP_WSBEiJ_T0097585.1 MGP_WSBEiJ_G0036248.1 mouse_genomes_project 1 154772928 154773061 - Gm25279 snRNA snRNA MGP_WSBEiJ_T0011765.1 MGP_WSBEiJ_G0009895.1 mouse_genomes_project 1 41772355 41772808 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021794.1 MGP_WSBEiJ_G0015967.1 mouse_genomes_project 1 142001513 142015214 - MGP_WSBEiJ_P0021794 Cfhr1 protein_coding protein_coding MGP_WSBEiJ_T0002778.1 MGP_WSBEiJ_G0002634.1 mouse_genomes_project 1 86497581 86530462 - Gm16341 antisense antisense MGP_WSBEiJ_T0016423.1 MGP_WSBEiJ_G0014526.1 mouse_genomes_project 1 98951476 98956022 - B230216N24Rik processed_transcript retained_intron MGP_WSBEiJ_T0016424.1 MGP_WSBEiJ_G0014526.1 mouse_genomes_project 1 98951487 98968115 - B230216N24Rik processed_transcript sense_intronic MGP_WSBEiJ_T0016425.1 MGP_WSBEiJ_G0014526.1 mouse_genomes_project 1 98952073 98968149 - B230216N24Rik processed_transcript sense_intronic MGP_WSBEiJ_T0016426.1 MGP_WSBEiJ_G0014526.1 mouse_genomes_project 1 98952224 98979103 - B230216N24Rik processed_transcript sense_intronic MGP_WSBEiJ_T0016427.1 MGP_WSBEiJ_G0014526.1 mouse_genomes_project 1 98966174 98968110 - B230216N24Rik processed_transcript retained_intron MGP_WSBEiJ_T0097522.1 MGP_WSBEiJ_G0036185.1 mouse_genomes_project 1 10520134 10520246 - Gm23169 snRNA snRNA MGP_WSBEiJ_T0018952.1 MGP_WSBEiJ_G0015392.1 mouse_genomes_project 1 41589128 41609431 + MGP_WSBEiJ_P0018952 AI597479 protein_coding protein_coding MGP_WSBEiJ_T0022946.1 MGP_WSBEiJ_G0016206.1 mouse_genomes_project 1 176969146 176970209 - MGP_WSBEiJ_P0022946 Olfr1406 protein_coding protein_coding MGP_WSBEiJ_T0022947.1 MGP_WSBEiJ_G0016206.1 mouse_genomes_project 1 176969873 176976202 - MGP_WSBEiJ_P0022947 Olfr1406 protein_coding protein_coding MGP_WSBEiJ_T0021660.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138141498 138157723 + MGP_WSBEiJ_P0021660 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021661.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138141530 138157723 + MGP_WSBEiJ_P0021661 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021662.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138141534 138144859 + Tnnt2 protein_coding retained_intron MGP_WSBEiJ_T0021663.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138141534 138150175 + Tnnt2 protein_coding retained_intron MGP_WSBEiJ_T0021664.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138141546 138153472 + MGP_WSBEiJ_P0021664 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021665.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138141554 138157723 + MGP_WSBEiJ_P0021665 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021666.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138141557 138157723 + MGP_WSBEiJ_P0021666 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021667.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138145838 138154882 + MGP_WSBEiJ_P0021667 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021668.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138145996 138157723 + MGP_WSBEiJ_P0021668 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021669.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138146014 138157723 + MGP_WSBEiJ_P0021669 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021670.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138146014 138157723 + MGP_WSBEiJ_P0021670 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021671.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138146014 138157723 + MGP_WSBEiJ_P0021671 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021672.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138146014 138157723 + MGP_WSBEiJ_P0021672 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021673.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138146014 138157723 + MGP_WSBEiJ_P0021673 Tnnt2 protein_coding protein_coding MGP_WSBEiJ_T0021674.1 MGP_WSBEiJ_G0015942.1 mouse_genomes_project 1 138154872 138155164 + Tnnt2 protein_coding retained_intron MGP_WSBEiJ_T0021327.1 MGP_WSBEiJ_G0015869.1 mouse_genomes_project 1 133748569 133775913 + MGP_WSBEiJ_P0021327 Slc26a9 protein_coding protein_coding MGP_WSBEiJ_T0021328.1 MGP_WSBEiJ_G0015869.1 mouse_genomes_project 1 133748585 133768389 + MGP_WSBEiJ_P0021328 Slc26a9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021329.1 MGP_WSBEiJ_G0015869.1 mouse_genomes_project 1 133754945 133755650 + Slc26a9 protein_coding retained_intron MGP_WSBEiJ_T0021330.1 MGP_WSBEiJ_G0015869.1 mouse_genomes_project 1 133755053 133758548 + MGP_WSBEiJ_P0021330 Slc26a9 protein_coding protein_coding MGP_WSBEiJ_T0021452.1 MGP_WSBEiJ_G0015893.1 mouse_genomes_project 1 135402977 135417016 + MGP_WSBEiJ_P0021452 Golt1a protein_coding protein_coding MGP_WSBEiJ_T0021457.1 MGP_WSBEiJ_G0015893.1 mouse_genomes_project 1 135403067 135415040 + MGP_WSBEiJ_P0021457 Golt1a protein_coding protein_coding MGP_WSBEiJ_T0098803.1 MGP_WSBEiJ_G0037466.1 mouse_genomes_project 1 163979413 163979545 + Gm23528 snoRNA snoRNA MGP_WSBEiJ_T0023589.1 MGP_WSBEiJ_G0016360.1 mouse_genomes_project 1 197169947 197445970 - MGP_WSBEiJ_P0023589 Hhat protein_coding protein_coding MGP_WSBEiJ_T0023590.1 MGP_WSBEiJ_G0016360.1 mouse_genomes_project 1 197186064 197445980 - MGP_WSBEiJ_P0023590 Hhat protein_coding protein_coding MGP_WSBEiJ_T0023591.1 MGP_WSBEiJ_G0016360.1 mouse_genomes_project 1 197216311 197445975 - MGP_WSBEiJ_P0023591 Hhat protein_coding non_stop_decay MGP_WSBEiJ_T0023592.1 MGP_WSBEiJ_G0016360.1 mouse_genomes_project 1 197318731 197358319 - Hhat protein_coding processed_transcript MGP_WSBEiJ_T0023593.1 MGP_WSBEiJ_G0016360.1 mouse_genomes_project 1 197399852 197410918 - Hhat protein_coding processed_transcript MGP_WSBEiJ_T0023594.1 MGP_WSBEiJ_G0016360.1 mouse_genomes_project 1 197410048 197445749 - Hhat protein_coding processed_transcript MGP_WSBEiJ_T0011047.1 MGP_WSBEiJ_G0009204.1 mouse_genomes_project 1 26999329 26999441 - Gm25586 misc_RNA misc_RNA MGP_WSBEiJ_T0011884.1 MGP_WSBEiJ_G0010014.1 mouse_genomes_project 1 79481663 79483018 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023664.1 MGP_WSBEiJ_G0016372.1 mouse_genomes_project 1 199680011 199702347 + MGP_WSBEiJ_P0023664 Cd34 protein_coding protein_coding MGP_WSBEiJ_T0023665.1 MGP_WSBEiJ_G0016372.1 mouse_genomes_project 1 199680067 199702347 + MGP_WSBEiJ_P0023665 Cd34 protein_coding protein_coding MGP_WSBEiJ_T0023666.1 MGP_WSBEiJ_G0016372.1 mouse_genomes_project 1 199680097 199691829 + Cd34 protein_coding retained_intron MGP_WSBEiJ_T0023667.1 MGP_WSBEiJ_G0016372.1 mouse_genomes_project 1 199680143 199682423 + Cd34 protein_coding retained_intron MGP_WSBEiJ_T0023668.1 MGP_WSBEiJ_G0016372.1 mouse_genomes_project 1 199680187 199699620 + MGP_WSBEiJ_P0023668 Cd34 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005647.1 MGP_WSBEiJ_G0004740.1 mouse_genomes_project 1 51297813 51366817 + Gm553 lincRNA lincRNA MGP_WSBEiJ_T0012099.1 MGP_WSBEiJ_G0010229.1 mouse_genomes_project 1 175423890 175424418 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020648.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92049524 92075077 - MGP_WSBEiJ_P0020648 Ilkap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020649.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92049528 92061006 - MGP_WSBEiJ_P0020649 Ilkap protein_coding protein_coding MGP_WSBEiJ_T0020650.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92051495 92075166 - MGP_WSBEiJ_P0020650 Ilkap protein_coding protein_coding MGP_WSBEiJ_T0020651.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92051496 92075132 - Ilkap protein_coding retained_intron MGP_WSBEiJ_T0020652.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92051623 92060953 - MGP_WSBEiJ_P0020652 Ilkap protein_coding protein_coding MGP_WSBEiJ_T0020653.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92051675 92054583 - Ilkap protein_coding retained_intron MGP_WSBEiJ_T0020654.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92051718 92075176 - MGP_WSBEiJ_P0020654 Ilkap protein_coding protein_coding MGP_WSBEiJ_T0020655.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92051719 92075184 - MGP_WSBEiJ_P0020655 Ilkap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020656.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92057418 92075198 - Ilkap protein_coding processed_transcript MGP_WSBEiJ_T0020657.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92061004 92075168 - MGP_WSBEiJ_P0020657 Ilkap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020658.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92061634 92065185 - Ilkap protein_coding retained_intron MGP_WSBEiJ_T0020659.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92061723 92075161 - MGP_WSBEiJ_P0020659 Ilkap protein_coding protein_coding MGP_WSBEiJ_T0020660.1 MGP_WSBEiJ_G0015717.1 mouse_genomes_project 1 92066612 92075177 - Ilkap protein_coding retained_intron MGP_WSBEiJ_T0020342.1 MGP_WSBEiJ_G0015650.1 mouse_genomes_project 1 85994717 86055438 + MGP_WSBEiJ_P0020342 Cab39 protein_coding protein_coding MGP_WSBEiJ_T0020343.1 MGP_WSBEiJ_G0015650.1 mouse_genomes_project 1 85994817 86021116 + MGP_WSBEiJ_P0020343 Cab39 protein_coding protein_coding MGP_WSBEiJ_T0020344.1 MGP_WSBEiJ_G0015650.1 mouse_genomes_project 1 85995744 86041185 + MGP_WSBEiJ_P0020344 Cab39 protein_coding protein_coding MGP_WSBEiJ_T0020345.1 MGP_WSBEiJ_G0015650.1 mouse_genomes_project 1 85995787 86054227 + MGP_WSBEiJ_P0020345 Cab39 protein_coding protein_coding MGP_WSBEiJ_T0020346.1 MGP_WSBEiJ_G0015650.1 mouse_genomes_project 1 86046946 86049937 + Cab39 protein_coding retained_intron MGP_WSBEiJ_T0019059.1 MGP_WSBEiJ_G0015415.1 mouse_genomes_project 1 48891817 48892433 - MGP_WSBEiJ_P0019059 protein_coding protein_coding MGP_WSBEiJ_T0020494.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 87962598 87980010 + Inpp5d protein_coding retained_intron MGP_WSBEiJ_T0020495.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 87962604 88074358 + MGP_WSBEiJ_P0020495 Inpp5d protein_coding protein_coding MGP_WSBEiJ_T0020496.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 87962631 87991238 + Inpp5d protein_coding processed_transcript MGP_WSBEiJ_T0020497.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 87962640 88074358 + MGP_WSBEiJ_P0020497 Inpp5d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020498.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 87962641 88073549 + MGP_WSBEiJ_P0020498 Inpp5d protein_coding protein_coding MGP_WSBEiJ_T0020499.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 87962731 88074365 + MGP_WSBEiJ_P0020499 Inpp5d protein_coding protein_coding MGP_WSBEiJ_T0020500.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 87962869 88016342 + MGP_WSBEiJ_P0020500 Inpp5d protein_coding protein_coding MGP_WSBEiJ_T0020501.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 87963916 88016266 + MGP_WSBEiJ_P0020501 Inpp5d protein_coding protein_coding MGP_WSBEiJ_T0020502.1 MGP_WSBEiJ_G0015683.1 mouse_genomes_project 1 88063232 88066005 + Inpp5d protein_coding processed_transcript MGP_WSBEiJ_T0012110.1 MGP_WSBEiJ_G0010240.1 mouse_genomes_project 1 183695535 183696054 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020353.1 MGP_WSBEiJ_G0015653.1 mouse_genomes_project 1 86144633 86168283 - MGP_WSBEiJ_P0020353 Gpr55 protein_coding protein_coding MGP_WSBEiJ_T0022442.1 MGP_WSBEiJ_G0016089.1 mouse_genomes_project 1 167689355 167706608 + MGP_WSBEiJ_P0022442 Slc19a2 protein_coding protein_coding MGP_WSBEiJ_T0022443.1 MGP_WSBEiJ_G0016089.1 mouse_genomes_project 1 167689364 167706592 + MGP_WSBEiJ_P0022443 Slc19a2 protein_coding protein_coding MGP_WSBEiJ_T0022444.1 MGP_WSBEiJ_G0016089.1 mouse_genomes_project 1 167689562 167704741 + MGP_WSBEiJ_P0022444 Slc19a2 protein_coding protein_coding MGP_WSBEiJ_T0022445.1 MGP_WSBEiJ_G0016089.1 mouse_genomes_project 1 167703575 167704674 + Slc19a2 protein_coding retained_intron MGP_WSBEiJ_T0016393.1 MGP_WSBEiJ_G0014512.1 mouse_genomes_project 1 37798906 37804918 - Gm15832 processed_transcript processed_transcript MGP_WSBEiJ_T0018868.1 MGP_WSBEiJ_G0015373.1 mouse_genomes_project 1 37804219 37830218 - MGP_WSBEiJ_P0018868 Rnf149 protein_coding protein_coding MGP_WSBEiJ_T0018869.1 MGP_WSBEiJ_G0015373.1 mouse_genomes_project 1 37805384 37830169 - MGP_WSBEiJ_P0018869 Rnf149 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018870.1 MGP_WSBEiJ_G0015373.1 mouse_genomes_project 1 37808512 37811666 - Rnf149 protein_coding retained_intron MGP_WSBEiJ_T0018871.1 MGP_WSBEiJ_G0015373.1 mouse_genomes_project 1 37818005 37830116 - MGP_WSBEiJ_P0018871 Rnf149 protein_coding protein_coding MGP_WSBEiJ_T0018190.1 MGP_WSBEiJ_G0015239.1 mouse_genomes_project 1 6657415 6659122 + MGP_WSBEiJ_P0018190 protein_coding protein_coding MGP_WSBEiJ_T0018606.1 MGP_WSBEiJ_G0015324.1 mouse_genomes_project 1 32465235 32470928 + MGP_WSBEiJ_P0018606 protein_coding protein_coding MGP_WSBEiJ_T0018607.1 MGP_WSBEiJ_G0015324.1 mouse_genomes_project 1 32465246 32466959 + MGP_WSBEiJ_P0018607 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000400.1 MGP_WSBEiJ_G0000346.1 mouse_genomes_project 1 30365167 30367766 + TEC TEC MGP_WSBEiJ_T0016398.1 MGP_WSBEiJ_G0014515.1 mouse_genomes_project 1 42898577 42900216 + Gm28893 processed_transcript processed_transcript MGP_WSBEiJ_T0012067.1 MGP_WSBEiJ_G0010197.1 mouse_genomes_project 1 162660529 162661035 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018564.1 MGP_WSBEiJ_G0015319.1 mouse_genomes_project 1 31788220 31846134 - MGP_WSBEiJ_P0018564 Bend6 protein_coding protein_coding MGP_WSBEiJ_T0018565.1 MGP_WSBEiJ_G0015319.1 mouse_genomes_project 1 31788220 31846149 - MGP_WSBEiJ_P0018565 Bend6 protein_coding protein_coding MGP_WSBEiJ_T0018566.1 MGP_WSBEiJ_G0015319.1 mouse_genomes_project 1 31798844 31820616 - Bend6 protein_coding processed_transcript MGP_WSBEiJ_T0018567.1 MGP_WSBEiJ_G0015319.1 mouse_genomes_project 1 31799305 31820978 - Bend6 protein_coding retained_intron MGP_WSBEiJ_T0018568.1 MGP_WSBEiJ_G0015319.1 mouse_genomes_project 1 31810884 31820626 - Bend6 protein_coding processed_transcript MGP_WSBEiJ_T0002933.1 MGP_WSBEiJ_G0002754.1 mouse_genomes_project 1 197535365 197536689 + Gm15867 antisense antisense MGP_WSBEiJ_T0005834.1 MGP_WSBEiJ_G0004890.1 mouse_genomes_project 1 139038216 139077140 + Platr22 lincRNA lincRNA MGP_WSBEiJ_T0005775.1 MGP_WSBEiJ_G0004843.1 mouse_genomes_project 1 107542866 107544688 - A530053M12Rik lincRNA lincRNA MGP_WSBEiJ_T0011707.1 MGP_WSBEiJ_G0009837.1 mouse_genomes_project 1 18789642 18789858 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011959.1 MGP_WSBEiJ_G0010089.1 mouse_genomes_project 1 113463101 113463939 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002803.1 MGP_WSBEiJ_G0002654.1 mouse_genomes_project 1 119863513 119864124 - 2900060B14Rik antisense antisense MGP_WSBEiJ_T0002804.1 MGP_WSBEiJ_G0002654.1 mouse_genomes_project 1 119863526 119863604 - 2900060B14Rik antisense antisense MGP_WSBEiJ_T0100398.1 MGP_WSBEiJ_G0038857.1 mouse_genomes_project 1 87384220 87387191 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005748.1 MGP_WSBEiJ_G0004820.1 mouse_genomes_project 1 91972309 91979512 - Gm26683 lincRNA lincRNA MGP_WSBEiJ_T0011673.1 MGP_WSBEiJ_G0009803.1 mouse_genomes_project 1 6499370 6501283 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021503.1 MGP_WSBEiJ_G0015906.1 mouse_genomes_project 1 136056529 136060642 - Optc protein_coding retained_intron MGP_WSBEiJ_T0021504.1 MGP_WSBEiJ_G0015906.1 mouse_genomes_project 1 136056529 136066485 - MGP_WSBEiJ_P0021504 Optc protein_coding protein_coding MGP_WSBEiJ_T0021505.1 MGP_WSBEiJ_G0015906.1 mouse_genomes_project 1 136056530 136067312 - MGP_WSBEiJ_P0021505 Optc protein_coding protein_coding MGP_WSBEiJ_T0021506.1 MGP_WSBEiJ_G0015906.1 mouse_genomes_project 1 136057029 136066439 - MGP_WSBEiJ_P0021506 Optc protein_coding protein_coding MGP_WSBEiJ_T0021507.1 MGP_WSBEiJ_G0015906.1 mouse_genomes_project 1 136060148 136066315 - MGP_WSBEiJ_P0021507 Optc protein_coding protein_coding MGP_WSBEiJ_T0019316.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57417938 57431814 - Clk1 protein_coding retained_intron MGP_WSBEiJ_T0019317.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57419749 57420611 - Clk1 protein_coding processed_transcript MGP_WSBEiJ_T0019318.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57419749 57421187 - Clk1 protein_coding processed_transcript MGP_WSBEiJ_T0019319.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57419749 57424515 - Clk1 protein_coding retained_intron MGP_WSBEiJ_T0019320.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57419749 57431814 - MGP_WSBEiJ_P0019320 Clk1 protein_coding protein_coding MGP_WSBEiJ_T0019321.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57419749 57431814 - MGP_WSBEiJ_P0019321 Clk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019322.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57419749 57431814 - MGP_WSBEiJ_P0019322 Clk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019323.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57420065 57421575 - Clk1 protein_coding processed_transcript MGP_WSBEiJ_T0019324.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57422339 57428146 - Clk1 protein_coding retained_intron MGP_WSBEiJ_T0019325.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57422364 57429006 - Clk1 protein_coding retained_intron MGP_WSBEiJ_T0019326.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57423892 57431814 - Clk1 protein_coding retained_intron MGP_WSBEiJ_T0019327.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57424659 57425176 - Clk1 protein_coding retained_intron MGP_WSBEiJ_T0019328.1 MGP_WSBEiJ_G0015465.1 mouse_genomes_project 1 57429373 57431814 - Clk1 protein_coding retained_intron MGP_WSBEiJ_T0000746.1 MGP_WSBEiJ_G0000687.1 mouse_genomes_project 1 186816004 186820178 + TEC TEC MGP_WSBEiJ_T0018215.1 MGP_WSBEiJ_G0015245.1 mouse_genomes_project 1 7045407 7061725 + MGP_WSBEiJ_P0018215 Mcmdc2 protein_coding protein_coding MGP_WSBEiJ_T0018216.1 MGP_WSBEiJ_G0015245.1 mouse_genomes_project 1 7045407 7081127 + MGP_WSBEiJ_P0018216 Mcmdc2 protein_coding protein_coding MGP_WSBEiJ_T0018217.1 MGP_WSBEiJ_G0015245.1 mouse_genomes_project 1 7045437 7080656 + MGP_WSBEiJ_P0018217 Mcmdc2 protein_coding protein_coding MGP_WSBEiJ_T0018218.1 MGP_WSBEiJ_G0015245.1 mouse_genomes_project 1 7045439 7082258 + MGP_WSBEiJ_P0018218 Mcmdc2 protein_coding protein_coding MGP_WSBEiJ_T0018219.1 MGP_WSBEiJ_G0015245.1 mouse_genomes_project 1 7048085 7060466 + MGP_WSBEiJ_P0018219 Mcmdc2 protein_coding protein_coding MGP_WSBEiJ_T0018220.1 MGP_WSBEiJ_G0015245.1 mouse_genomes_project 1 7048490 7081116 + MGP_WSBEiJ_P0018220 Mcmdc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0018221.1 MGP_WSBEiJ_G0015245.1 mouse_genomes_project 1 7072321 7081127 + MGP_WSBEiJ_P0018221 Mcmdc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020969.1 MGP_WSBEiJ_G0015790.1 mouse_genomes_project 1 108484105 108487964 - MGP_WSBEiJ_P0020969 protein_coding protein_coding MGP_WSBEiJ_T0020971.1 MGP_WSBEiJ_G0015790.1 mouse_genomes_project 1 108484123 108487964 - MGP_WSBEiJ_P0020971 protein_coding protein_coding MGP_WSBEiJ_T0023240.1 MGP_WSBEiJ_G0016288.1 mouse_genomes_project 1 185318575 185379972 - MGP_WSBEiJ_P0023240 Nvl protein_coding protein_coding MGP_WSBEiJ_T0023241.1 MGP_WSBEiJ_G0016288.1 mouse_genomes_project 1 185322874 185324949 - Nvl protein_coding processed_transcript MGP_WSBEiJ_T0023242.1 MGP_WSBEiJ_G0016288.1 mouse_genomes_project 1 185324440 185326706 - Nvl protein_coding retained_intron MGP_WSBEiJ_T0023243.1 MGP_WSBEiJ_G0016288.1 mouse_genomes_project 1 185327167 185338929 - Nvl protein_coding retained_intron MGP_WSBEiJ_T0023244.1 MGP_WSBEiJ_G0016288.1 mouse_genomes_project 1 185372009 185374420 - Nvl protein_coding retained_intron MGP_WSBEiJ_T0011845.1 MGP_WSBEiJ_G0009975.1 mouse_genomes_project 1 61368618 61368877 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012122.1 MGP_WSBEiJ_G0010252.1 mouse_genomes_project 1 188929772 188930179 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005848.1 MGP_WSBEiJ_G0004901.1 mouse_genomes_project 1 153002180 153009316 - Ptgs2os2 lincRNA lincRNA MGP_WSBEiJ_T0005933.1 MGP_WSBEiJ_G0004969.1 mouse_genomes_project 1 188655892 188690192 + Gm37223 lincRNA lincRNA MGP_WSBEiJ_T0005934.1 MGP_WSBEiJ_G0004969.1 mouse_genomes_project 1 188655892 188690224 + Gm37223 lincRNA lincRNA MGP_WSBEiJ_T0005935.1 MGP_WSBEiJ_G0004969.1 mouse_genomes_project 1 188655892 188690221 + Gm37223 lincRNA lincRNA MGP_WSBEiJ_T0005936.1 MGP_WSBEiJ_G0004969.1 mouse_genomes_project 1 188655896 188693907 + Gm37223 lincRNA lincRNA MGP_WSBEiJ_T0005937.1 MGP_WSBEiJ_G0004969.1 mouse_genomes_project 1 188655907 188693935 + Gm37223 lincRNA lincRNA MGP_WSBEiJ_T0005939.1 MGP_WSBEiJ_G0004969.1 mouse_genomes_project 1 188682342 188693907 + Gm37223 lincRNA lincRNA MGP_WSBEiJ_T0005706.1 MGP_WSBEiJ_G0004784.1 mouse_genomes_project 1 73436944 73557119 - 6030407O03Rik lincRNA lincRNA MGP_WSBEiJ_T0005707.1 MGP_WSBEiJ_G0004784.1 mouse_genomes_project 1 73436944 73686077 - 6030407O03Rik lincRNA lincRNA MGP_WSBEiJ_T0021118.1 MGP_WSBEiJ_G0015822.1 mouse_genomes_project 1 122948221 123024381 + MGP_WSBEiJ_P0021118 Ccdc93 protein_coding protein_coding MGP_WSBEiJ_T0021119.1 MGP_WSBEiJ_G0015822.1 mouse_genomes_project 1 122948247 122966827 + Ccdc93 protein_coding retained_intron MGP_WSBEiJ_T0021120.1 MGP_WSBEiJ_G0015822.1 mouse_genomes_project 1 122948267 122967520 + Ccdc93 protein_coding processed_transcript MGP_WSBEiJ_T0021121.1 MGP_WSBEiJ_G0015822.1 mouse_genomes_project 1 122948280 122961790 + Ccdc93 protein_coding processed_transcript MGP_WSBEiJ_T0021122.1 MGP_WSBEiJ_G0015822.1 mouse_genomes_project 1 122948282 123019773 + MGP_WSBEiJ_P0021122 Ccdc93 protein_coding protein_coding MGP_WSBEiJ_T0021123.1 MGP_WSBEiJ_G0015822.1 mouse_genomes_project 1 123009409 123017669 + Ccdc93 protein_coding retained_intron MGP_WSBEiJ_T0020395.1 MGP_WSBEiJ_G0015661.1 mouse_genomes_project 1 86578514 86593159 - MGP_WSBEiJ_P0020395 Ncl protein_coding protein_coding MGP_WSBEiJ_T0020396.1 MGP_WSBEiJ_G0015661.1 mouse_genomes_project 1 86584291 86593123 - Ncl protein_coding retained_intron MGP_WSBEiJ_T0020397.1 MGP_WSBEiJ_G0015661.1 mouse_genomes_project 1 86584292 86585008 - Ncl protein_coding retained_intron MGP_WSBEiJ_T0020398.1 MGP_WSBEiJ_G0015661.1 mouse_genomes_project 1 86584360 86585859 - Ncl protein_coding retained_intron MGP_WSBEiJ_T0020399.1 MGP_WSBEiJ_G0015661.1 mouse_genomes_project 1 86584897 86586102 - Ncl protein_coding retained_intron MGP_WSBEiJ_T0020400.1 MGP_WSBEiJ_G0015661.1 mouse_genomes_project 1 86591104 86592728 - MGP_WSBEiJ_P0020400 Ncl protein_coding protein_coding MGP_WSBEiJ_T0000580.1 MGP_WSBEiJ_G0000525.1 mouse_genomes_project 1 129043527 129048289 + TEC TEC MGP_WSBEiJ_T0019575.1 MGP_WSBEiJ_G0015506.1 mouse_genomes_project 1 63026590 63059290 - MGP_WSBEiJ_P0019575 Mdh1b protein_coding protein_coding MGP_WSBEiJ_T0020274.1 MGP_WSBEiJ_G0015637.1 mouse_genomes_project 1 83262303 83264704 + MGP_WSBEiJ_P0020274 Ccl20 protein_coding protein_coding MGP_WSBEiJ_T0020275.1 MGP_WSBEiJ_G0015637.1 mouse_genomes_project 1 83262311 83264705 + MGP_WSBEiJ_P0020275 Ccl20 protein_coding protein_coding MGP_WSBEiJ_T0020276.1 MGP_WSBEiJ_G0015637.1 mouse_genomes_project 1 83262330 83264705 + MGP_WSBEiJ_P0020276 Ccl20 protein_coding protein_coding MGP_WSBEiJ_T0002886.1 MGP_WSBEiJ_G0002718.1 mouse_genomes_project 1 175967089 175967749 + Gm17224 antisense antisense MGP_WSBEiJ_T0011677.1 MGP_WSBEiJ_G0009807.1 mouse_genomes_project 1 6931966 6932323 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000510.1 MGP_WSBEiJ_G0000455.1 mouse_genomes_project 1 83478635 83479924 - TEC TEC MGP_WSBEiJ_T0022229.1 MGP_WSBEiJ_G0016046.1 mouse_genomes_project 1 162816732 163244719 + MGP_WSBEiJ_P0022229 Tnr protein_coding protein_coding MGP_WSBEiJ_T0022230.1 MGP_WSBEiJ_G0016046.1 mouse_genomes_project 1 162816804 163037791 + Tnr protein_coding retained_intron MGP_WSBEiJ_T0022231.1 MGP_WSBEiJ_G0016046.1 mouse_genomes_project 1 163037505 163237396 + MGP_WSBEiJ_P0022231 Tnr protein_coding protein_coding MGP_WSBEiJ_T0022232.1 MGP_WSBEiJ_G0016046.1 mouse_genomes_project 1 163074409 163160933 + MGP_WSBEiJ_P0022232 Tnr protein_coding protein_coding MGP_WSBEiJ_T0022233.1 MGP_WSBEiJ_G0016046.1 mouse_genomes_project 1 163160987 163174185 + MGP_WSBEiJ_P0022233 Tnr protein_coding protein_coding MGP_WSBEiJ_T0000404.1 MGP_WSBEiJ_G0000350.1 mouse_genomes_project 1 30899071 30904076 - TEC TEC MGP_WSBEiJ_T0096875.1 MGP_WSBEiJ_G0035556.1 mouse_genomes_project 1 35110307 35110426 + n-R5s210 rRNA rRNA MGP_WSBEiJ_T0005632.1 MGP_WSBEiJ_G0004728.1 mouse_genomes_project 1 42274516 42275128 + Gm29157 lincRNA lincRNA MGP_WSBEiJ_T0019624.1 MGP_WSBEiJ_G0015520.1 mouse_genomes_project 1 64455913 64458287 - Cryga protein_coding retained_intron MGP_WSBEiJ_T0019625.1 MGP_WSBEiJ_G0015520.1 mouse_genomes_project 1 64455913 64458300 - MGP_WSBEiJ_P0019625 Cryga protein_coding protein_coding MGP_WSBEiJ_T0098744.1 MGP_WSBEiJ_G0037407.1 mouse_genomes_project 1 37761339 37761554 + Gm24826 snoRNA snoRNA MGP_WSBEiJ_T0000480.1 MGP_WSBEiJ_G0000425.1 mouse_genomes_project 1 68151201 68152763 - TEC TEC MGP_WSBEiJ_T0000691.1 MGP_WSBEiJ_G0000634.1 mouse_genomes_project 1 165100372 165101495 + TEC TEC MGP_WSBEiJ_T0000695.1 MGP_WSBEiJ_G0000638.1 mouse_genomes_project 1 166715186 166717467 - TEC TEC MGP_WSBEiJ_T0022245.1 MGP_WSBEiJ_G0016050.1 mouse_genomes_project 1 163519909 163531580 - MGP_WSBEiJ_P0022245 Cacybp protein_coding protein_coding MGP_WSBEiJ_T0022246.1 MGP_WSBEiJ_G0016050.1 mouse_genomes_project 1 163524821 163531510 - MGP_WSBEiJ_P0022246 Cacybp protein_coding protein_coding MGP_WSBEiJ_T0022247.1 MGP_WSBEiJ_G0016050.1 mouse_genomes_project 1 163526792 163531431 - Cacybp protein_coding retained_intron MGP_WSBEiJ_T0022168.1 MGP_WSBEiJ_G0016037.1 mouse_genomes_project 1 159975046 159995660 + MGP_WSBEiJ_P0022168 Angptl1 protein_coding protein_coding MGP_WSBEiJ_T0022169.1 MGP_WSBEiJ_G0016037.1 mouse_genomes_project 1 159975450 159982124 + MGP_WSBEiJ_P0022169 Angptl1 protein_coding protein_coding MGP_WSBEiJ_T0021279.1 MGP_WSBEiJ_G0015856.1 mouse_genomes_project 1 132901234 132905679 - MGP_WSBEiJ_P0021279 Il20 protein_coding protein_coding MGP_WSBEiJ_T0021280.1 MGP_WSBEiJ_G0015856.1 mouse_genomes_project 1 132901664 132905454 - MGP_WSBEiJ_P0021280 Il20 protein_coding protein_coding MGP_WSBEiJ_T0019377.1 MGP_WSBEiJ_G0015474.1 mouse_genomes_project 1 58000557 58067184 - MGP_WSBEiJ_P0019377 Trak2 protein_coding protein_coding MGP_WSBEiJ_T0019378.1 MGP_WSBEiJ_G0015474.1 mouse_genomes_project 1 58003612 58040137 - MGP_WSBEiJ_P0019378 Trak2 protein_coding protein_coding MGP_WSBEiJ_T0019379.1 MGP_WSBEiJ_G0015474.1 mouse_genomes_project 1 58003780 58007360 - Trak2 protein_coding retained_intron MGP_WSBEiJ_T0019380.1 MGP_WSBEiJ_G0015474.1 mouse_genomes_project 1 58020602 58022404 - Trak2 protein_coding processed_transcript MGP_WSBEiJ_T0019381.1 MGP_WSBEiJ_G0015474.1 mouse_genomes_project 1 58029952 58067183 - MGP_WSBEiJ_P0019381 Trak2 protein_coding protein_coding MGP_WSBEiJ_T0019382.1 MGP_WSBEiJ_G0015474.1 mouse_genomes_project 1 58039701 58067184 - Trak2 protein_coding retained_intron MGP_WSBEiJ_T0011702.1 MGP_WSBEiJ_G0009832.1 mouse_genomes_project 1 16667847 16668319 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021644.1 MGP_WSBEiJ_G0015938.1 mouse_genomes_project 1 138020073 138053794 + MGP_WSBEiJ_P0021644 Csrp1 protein_coding protein_coding MGP_WSBEiJ_T0021645.1 MGP_WSBEiJ_G0015938.1 mouse_genomes_project 1 138030849 138053794 + MGP_WSBEiJ_P0021645 Csrp1 protein_coding protein_coding MGP_WSBEiJ_T0020530.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88302683 88333917 - MGP_WSBEiJ_P0020530 Usp40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020531.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88302685 88368610 - MGP_WSBEiJ_P0020531 Usp40 protein_coding protein_coding MGP_WSBEiJ_T0020532.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88304005 88368593 - MGP_WSBEiJ_P0020532 Usp40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020533.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88304005 88368593 - MGP_WSBEiJ_P0020533 Usp40 protein_coding protein_coding MGP_WSBEiJ_T0020534.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88307264 88309239 - Usp40 protein_coding retained_intron MGP_WSBEiJ_T0020535.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88323560 88325736 - Usp40 protein_coding retained_intron MGP_WSBEiJ_T0020536.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88343762 88368587 - Usp40 protein_coding retained_intron MGP_WSBEiJ_T0020537.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88365966 88368609 - Usp40 protein_coding retained_intron MGP_WSBEiJ_T0020538.1 MGP_WSBEiJ_G0015687.1 mouse_genomes_project 1 88365966 88368288 - Usp40 protein_coding retained_intron MGP_WSBEiJ_T0097524.1 MGP_WSBEiJ_G0036187.1 mouse_genomes_project 1 22797031 22797138 - Gm22260 snRNA snRNA MGP_WSBEiJ_T0011052.1 MGP_WSBEiJ_G0009209.1 mouse_genomes_project 1 49281882 49282196 + Gm25843 misc_RNA misc_RNA MGP_WSBEiJ_T0018904.1 MGP_WSBEiJ_G0015381.1 mouse_genomes_project 1 38722800 38742119 + MGP_WSBEiJ_P0018904 Il1rl1 protein_coding protein_coding MGP_WSBEiJ_T0018905.1 MGP_WSBEiJ_G0015381.1 mouse_genomes_project 1 38730638 38735457 + MGP_WSBEiJ_P0018905 Il1rl1 protein_coding protein_coding MGP_WSBEiJ_T0018906.1 MGP_WSBEiJ_G0015381.1 mouse_genomes_project 1 38733676 38762156 + MGP_WSBEiJ_P0018906 Il1rl1 protein_coding protein_coding MGP_WSBEiJ_T0018907.1 MGP_WSBEiJ_G0015381.1 mouse_genomes_project 1 38733825 38743544 + MGP_WSBEiJ_P0018907 Il1rl1 protein_coding protein_coding MGP_WSBEiJ_T0018908.1 MGP_WSBEiJ_G0015381.1 mouse_genomes_project 1 38734677 38762135 + MGP_WSBEiJ_P0018908 Il1rl1 protein_coding protein_coding MGP_WSBEiJ_T0020779.1 MGP_WSBEiJ_G0015748.1 mouse_genomes_project 1 94064656 94073273 - Pask protein_coding retained_intron MGP_WSBEiJ_T0020780.1 MGP_WSBEiJ_G0015748.1 mouse_genomes_project 1 94064664 94099986 - MGP_WSBEiJ_P0020780 Pask protein_coding protein_coding MGP_WSBEiJ_T0020781.1 MGP_WSBEiJ_G0015748.1 mouse_genomes_project 1 94065724 94069036 - Pask protein_coding retained_intron MGP_WSBEiJ_T0020782.1 MGP_WSBEiJ_G0015748.1 mouse_genomes_project 1 94065971 94067231 - Pask protein_coding retained_intron MGP_WSBEiJ_T0020783.1 MGP_WSBEiJ_G0015748.1 mouse_genomes_project 1 94073687 94100662 - Pask protein_coding retained_intron MGP_WSBEiJ_T0020784.1 MGP_WSBEiJ_G0015748.1 mouse_genomes_project 1 94093296 94100679 - MGP_WSBEiJ_P0020784 Pask protein_coding protein_coding MGP_WSBEiJ_T0000439.1 MGP_WSBEiJ_G0000384.1 mouse_genomes_project 1 46225776 46226682 + TEC TEC MGP_WSBEiJ_T0005738.1 MGP_WSBEiJ_G0004810.1 mouse_genomes_project 1 89382791 89390859 - Gm29337 lincRNA lincRNA MGP_WSBEiJ_T0019142.1 MGP_WSBEiJ_G0015427.1 mouse_genomes_project 1 51635751 51639504 + Hibch protein_coding retained_intron MGP_WSBEiJ_T0019143.1 MGP_WSBEiJ_G0015427.1 mouse_genomes_project 1 51635854 51678997 + Hibch protein_coding retained_intron MGP_WSBEiJ_T0019144.1 MGP_WSBEiJ_G0015427.1 mouse_genomes_project 1 51635856 51712988 + MGP_WSBEiJ_P0019144 Hibch protein_coding protein_coding MGP_WSBEiJ_T0019145.1 MGP_WSBEiJ_G0015427.1 mouse_genomes_project 1 51642666 51650784 + Hibch protein_coding processed_transcript MGP_WSBEiJ_T0019146.1 MGP_WSBEiJ_G0015427.1 mouse_genomes_project 1 51659073 51689933 + Hibch protein_coding processed_transcript MGP_WSBEiJ_T0019147.1 MGP_WSBEiJ_G0015427.1 mouse_genomes_project 1 51691245 51704512 + Hibch protein_coding retained_intron MGP_WSBEiJ_T0011695.1 MGP_WSBEiJ_G0009825.1 mouse_genomes_project 1 14718067 14718553 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000597.1 MGP_WSBEiJ_G0000542.1 mouse_genomes_project 1 133342747 133344129 - TEC TEC MGP_WSBEiJ_T0021496.1 MGP_WSBEiJ_G0015905.1 mouse_genomes_project 1 135839728 135948688 - MGP_WSBEiJ_P0021496 Atp2b4 protein_coding protein_coding MGP_WSBEiJ_T0021497.1 MGP_WSBEiJ_G0015905.1 mouse_genomes_project 1 135844568 135900191 - MGP_WSBEiJ_P0021497 Atp2b4 protein_coding protein_coding MGP_WSBEiJ_T0021498.1 MGP_WSBEiJ_G0015905.1 mouse_genomes_project 1 135844568 135900191 - MGP_WSBEiJ_P0021498 Atp2b4 protein_coding protein_coding MGP_WSBEiJ_T0021499.1 MGP_WSBEiJ_G0015905.1 mouse_genomes_project 1 135848196 135900125 - MGP_WSBEiJ_P0021499 Atp2b4 protein_coding protein_coding MGP_WSBEiJ_T0021500.1 MGP_WSBEiJ_G0015905.1 mouse_genomes_project 1 135858918 135899725 - MGP_WSBEiJ_P0021500 Atp2b4 protein_coding protein_coding MGP_WSBEiJ_T0021501.1 MGP_WSBEiJ_G0015905.1 mouse_genomes_project 1 135861261 135862890 - Atp2b4 protein_coding retained_intron MGP_WSBEiJ_T0021502.1 MGP_WSBEiJ_G0015905.1 mouse_genomes_project 1 135900143 135948683 - Atp2b4 protein_coding processed_transcript MGP_WSBEiJ_T0012128.1 MGP_WSBEiJ_G0010258.1 mouse_genomes_project 1 194382299 194382561 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018527.1 MGP_WSBEiJ_G0015311.1 mouse_genomes_project 1 28915558 29015343 - MGP_WSBEiJ_P0018527 4931428L18Rik protein_coding protein_coding MGP_WSBEiJ_T0018528.1 MGP_WSBEiJ_G0015311.1 mouse_genomes_project 1 28923010 29015403 - MGP_WSBEiJ_P0018528 4931428L18Rik protein_coding protein_coding MGP_WSBEiJ_T0018529.1 MGP_WSBEiJ_G0015311.1 mouse_genomes_project 1 28923563 29015374 - MGP_WSBEiJ_P0018529 4931428L18Rik protein_coding protein_coding MGP_WSBEiJ_T0018532.1 MGP_WSBEiJ_G0015311.1 mouse_genomes_project 1 28993479 29015430 - MGP_WSBEiJ_P0018532 4931428L18Rik protein_coding protein_coding MGP_WSBEiJ_T0021373.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134223237 134295953 + MGP_WSBEiJ_P0021373 Lemd1 protein_coding protein_coding MGP_WSBEiJ_T0021374.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134223261 134294138 + MGP_WSBEiJ_P0021374 Lemd1 protein_coding protein_coding MGP_WSBEiJ_T0021375.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134223263 134241407 + Lemd1 protein_coding processed_transcript MGP_WSBEiJ_T0021376.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134232766 134237645 + Lemd1 protein_coding processed_transcript MGP_WSBEiJ_T0021377.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134235713 134236371 + Lemd1 protein_coding processed_transcript MGP_WSBEiJ_T0021378.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134261733 134293945 + MGP_WSBEiJ_P0021378 Lemd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021379.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134261762 134293765 + MGP_WSBEiJ_P0021379 Lemd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021380.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134263412 134264843 + Lemd1 protein_coding retained_intron MGP_WSBEiJ_T0021381.1 MGP_WSBEiJ_G0015878.1 mouse_genomes_project 1 134263412 134293790 + MGP_WSBEiJ_P0021381 Lemd1 protein_coding protein_coding MGP_WSBEiJ_T0005720.1 MGP_WSBEiJ_G0004796.1 mouse_genomes_project 1 80162946 80169666 + 9830004L10Rik lincRNA lincRNA MGP_WSBEiJ_T0005721.1 MGP_WSBEiJ_G0004796.1 mouse_genomes_project 1 80164590 80169666 + 9830004L10Rik lincRNA lincRNA MGP_WSBEiJ_T0005722.1 MGP_WSBEiJ_G0004796.1 mouse_genomes_project 1 80164612 80169711 + 9830004L10Rik lincRNA lincRNA MGP_WSBEiJ_T0005917.1 MGP_WSBEiJ_G0004958.1 mouse_genomes_project 1 185472407 185474921 + A430110L20Rik lincRNA lincRNA MGP_WSBEiJ_T0005918.1 MGP_WSBEiJ_G0004958.1 mouse_genomes_project 1 185472497 185474913 + A430110L20Rik lincRNA lincRNA MGP_WSBEiJ_T0000564.1 MGP_WSBEiJ_G0000509.1 mouse_genomes_project 1 123229918 123230667 + TEC TEC MGP_WSBEiJ_T0097551.1 MGP_WSBEiJ_G0036214.1 mouse_genomes_project 1 72012657 72012848 + Gm25939 snRNA snRNA MGP_WSBEiJ_T0020851.1 MGP_WSBEiJ_G0015760.1 mouse_genomes_project 1 94617451 94619001 + MGP_WSBEiJ_P0020851 D2hgdh protein_coding protein_coding MGP_WSBEiJ_T0020852.1 MGP_WSBEiJ_G0015760.1 mouse_genomes_project 1 94617782 94642997 + MGP_WSBEiJ_P0020852 D2hgdh protein_coding protein_coding MGP_WSBEiJ_T0020853.1 MGP_WSBEiJ_G0015760.1 mouse_genomes_project 1 94617816 94642997 + MGP_WSBEiJ_P0020853 D2hgdh protein_coding protein_coding MGP_WSBEiJ_T0020854.1 MGP_WSBEiJ_G0015760.1 mouse_genomes_project 1 94618825 94624570 + D2hgdh protein_coding processed_transcript MGP_WSBEiJ_T0020855.1 MGP_WSBEiJ_G0015760.1 mouse_genomes_project 1 94618827 94636730 + MGP_WSBEiJ_P0020855 D2hgdh protein_coding protein_coding MGP_WSBEiJ_T0020856.1 MGP_WSBEiJ_G0015760.1 mouse_genomes_project 1 94619104 94624979 + D2hgdh protein_coding processed_transcript MGP_WSBEiJ_T0000639.1 MGP_WSBEiJ_G0000582.1 mouse_genomes_project 1 149178469 149183984 - TEC TEC MGP_WSBEiJ_T0011989.1 MGP_WSBEiJ_G0010119.1 mouse_genomes_project 1 124732327 124733628 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011693.1 MGP_WSBEiJ_G0009823.1 mouse_genomes_project 1 14526843 14527222 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016442.1 MGP_WSBEiJ_G0014530.1 mouse_genomes_project 1 138446107 138451079 - Gm15850 processed_transcript processed_transcript MGP_WSBEiJ_T0016443.1 MGP_WSBEiJ_G0014530.1 mouse_genomes_project 1 138447647 138451067 - Gm15850 processed_transcript processed_transcript MGP_WSBEiJ_T0016444.1 MGP_WSBEiJ_G0014530.1 mouse_genomes_project 1 138447647 138451067 - Gm15850 processed_transcript processed_transcript MGP_WSBEiJ_T0016445.1 MGP_WSBEiJ_G0014530.1 mouse_genomes_project 1 138447647 138451067 - Gm15850 processed_transcript processed_transcript MGP_WSBEiJ_T0023405.1 MGP_WSBEiJ_G0016323.1 mouse_genomes_project 1 189802152 189815772 + MGP_WSBEiJ_P0023405 Slc30a10 protein_coding protein_coding MGP_WSBEiJ_T0000704.1 MGP_WSBEiJ_G0000647.1 mouse_genomes_project 1 169953800 169955119 - TEC TEC MGP_WSBEiJ_T0000560.1 MGP_WSBEiJ_G0000505.1 mouse_genomes_project 1 121236051 121246567 - TEC TEC MGP_WSBEiJ_T0019637.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546263 64566331 + Pikfyve protein_coding retained_intron MGP_WSBEiJ_T0019638.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546269 64606220 + MGP_WSBEiJ_P0019638 Pikfyve protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019639.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546273 64588817 + Pikfyve protein_coding retained_intron MGP_WSBEiJ_T0019640.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546274 64553122 + Pikfyve protein_coding retained_intron MGP_WSBEiJ_T0019641.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546276 64566799 + Pikfyve protein_coding processed_transcript MGP_WSBEiJ_T0019642.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546282 64645572 + MGP_WSBEiJ_P0019642 Pikfyve protein_coding protein_coding MGP_WSBEiJ_T0019643.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546284 64592609 + Pikfyve protein_coding retained_intron MGP_WSBEiJ_T0019644.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546293 64552826 + MGP_WSBEiJ_P0019644 Pikfyve protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019645.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64546330 64640889 + MGP_WSBEiJ_P0019645 Pikfyve protein_coding protein_coding MGP_WSBEiJ_T0019646.1 MGP_WSBEiJ_G0015524.1 mouse_genomes_project 1 64557398 64577661 + Pikfyve protein_coding retained_intron MGP_WSBEiJ_T0005682.1 MGP_WSBEiJ_G0004768.1 mouse_genomes_project 1 66685751 66774626 + Gm15668 lincRNA lincRNA MGP_WSBEiJ_T0000600.1 MGP_WSBEiJ_G0000545.1 mouse_genomes_project 1 134125301 134131246 + TEC TEC MGP_WSBEiJ_T0020169.1 MGP_WSBEiJ_G0015614.1 mouse_genomes_project 1 78469934 78489024 + MGP_WSBEiJ_P0020169 Mogat1 protein_coding protein_coding MGP_WSBEiJ_T0020170.1 MGP_WSBEiJ_G0015614.1 mouse_genomes_project 1 78470103 78490561 + MGP_WSBEiJ_P0020170 Mogat1 protein_coding protein_coding MGP_WSBEiJ_T0020171.1 MGP_WSBEiJ_G0015614.1 mouse_genomes_project 1 78470112 78499594 + MGP_WSBEiJ_P0020171 Mogat1 protein_coding protein_coding MGP_WSBEiJ_T0020172.1 MGP_WSBEiJ_G0015614.1 mouse_genomes_project 1 78470756 78484209 + MGP_WSBEiJ_P0020172 Mogat1 protein_coding protein_coding MGP_WSBEiJ_T0020173.1 MGP_WSBEiJ_G0015614.1 mouse_genomes_project 1 78470811 78499596 + MGP_WSBEiJ_P0020173 Mogat1 protein_coding protein_coding MGP_WSBEiJ_T0020174.1 MGP_WSBEiJ_G0015614.1 mouse_genomes_project 1 78499050 78499596 + Mogat1 protein_coding processed_transcript MGP_WSBEiJ_T0098745.1 MGP_WSBEiJ_G0037408.1 mouse_genomes_project 1 37761339 37761555 + Gm24826 snoRNA snoRNA MGP_WSBEiJ_T0005576.1 MGP_WSBEiJ_G0004689.1 mouse_genomes_project 1 18023022 18028288 + Gm28653 lincRNA lincRNA MGP_WSBEiJ_T0018336.1 MGP_WSBEiJ_G0015263.1 mouse_genomes_project 1 12093432 12145636 - MGP_WSBEiJ_P0018336 Trpa1 protein_coding protein_coding MGP_WSBEiJ_T0011790.1 MGP_WSBEiJ_G0009920.1 mouse_genomes_project 1 47418903 47419834 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019117.1 MGP_WSBEiJ_G0015423.1 mouse_genomes_project 1 51228753 51274949 - MGP_WSBEiJ_P0019117 Nab1 protein_coding protein_coding MGP_WSBEiJ_T0019118.1 MGP_WSBEiJ_G0015423.1 mouse_genomes_project 1 51228755 51275328 - MGP_WSBEiJ_P0019118 Nab1 protein_coding protein_coding MGP_WSBEiJ_T0019119.1 MGP_WSBEiJ_G0015423.1 mouse_genomes_project 1 51230647 51265331 - MGP_WSBEiJ_P0019119 Nab1 protein_coding protein_coding MGP_WSBEiJ_T0019120.1 MGP_WSBEiJ_G0015423.1 mouse_genomes_project 1 51230670 51238975 - Nab1 protein_coding retained_intron MGP_WSBEiJ_T0019121.1 MGP_WSBEiJ_G0015423.1 mouse_genomes_project 1 51264904 51274964 - Nab1 protein_coding processed_transcript MGP_WSBEiJ_T0009372.1 MGP_WSBEiJ_G0007529.1 mouse_genomes_project 1 94104362 94104426 + Mir6902 miRNA miRNA MGP_WSBEiJ_T0019255.1 MGP_WSBEiJ_G0015452.1 mouse_genomes_project 1 55570146 55571538 - MGP_WSBEiJ_P0019255 Hsfy2 protein_coding protein_coding MGP_WSBEiJ_T0002866.1 MGP_WSBEiJ_G0002702.1 mouse_genomes_project 1 166384644 166466673 + Gm37273 antisense antisense MGP_WSBEiJ_T0011745.1 MGP_WSBEiJ_G0009875.1 mouse_genomes_project 1 32608798 32609221 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000538.1 MGP_WSBEiJ_G0000483.1 mouse_genomes_project 1 92724126 92726632 - TEC TEC MGP_WSBEiJ_T0020296.1 MGP_WSBEiJ_G0015641.1 mouse_genomes_project 1 84540944 84864389 - MGP_WSBEiJ_P0020296 Dner protein_coding protein_coding MGP_WSBEiJ_T0020297.1 MGP_WSBEiJ_G0015641.1 mouse_genomes_project 1 84702914 84864187 - Dner protein_coding retained_intron MGP_WSBEiJ_T0020298.1 MGP_WSBEiJ_G0015641.1 mouse_genomes_project 1 84738898 84802353 - MGP_WSBEiJ_P0020298 Dner protein_coding protein_coding MGP_WSBEiJ_T0020299.1 MGP_WSBEiJ_G0015641.1 mouse_genomes_project 1 84741183 84785692 - MGP_WSBEiJ_P0020299 Dner protein_coding protein_coding MGP_WSBEiJ_T0011046.1 MGP_WSBEiJ_G0009203.1 mouse_genomes_project 1 13124807 13125110 + Gm23259 misc_RNA misc_RNA MGP_WSBEiJ_T0011825.1 MGP_WSBEiJ_G0009955.1 mouse_genomes_project 1 57644341 57644693 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022446.1 MGP_WSBEiJ_G0016090.1 mouse_genomes_project 1 167716748 167729029 + MGP_WSBEiJ_P0022446 Ccdc181 protein_coding protein_coding MGP_WSBEiJ_T0012118.1 MGP_WSBEiJ_G0010248.1 mouse_genomes_project 1 186708965 186709954 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098761.1 MGP_WSBEiJ_G0037424.1 mouse_genomes_project 1 62466653 62466731 + Gm26457 snoRNA snoRNA MGP_WSBEiJ_T0000517.1 MGP_WSBEiJ_G0000462.1 mouse_genomes_project 1 86332750 86335429 + TEC TEC MGP_WSBEiJ_T0002852.1 MGP_WSBEiJ_G0002692.1 mouse_genomes_project 1 160682880 160696456 - Gm15486 antisense antisense MGP_WSBEiJ_T0023531.1 MGP_WSBEiJ_G0016349.1 mouse_genomes_project 1 195971458 195996393 + MGP_WSBEiJ_P0023531 Tmem206 protein_coding protein_coding MGP_WSBEiJ_T0002828.1 MGP_WSBEiJ_G0002671.1 mouse_genomes_project 1 137351319 137355522 + Gm10535 antisense antisense MGP_WSBEiJ_T0009337.1 MGP_WSBEiJ_G0007494.1 mouse_genomes_project 1 42459324 42459434 - Gm24180 miRNA miRNA MGP_WSBEiJ_T0011969.1 MGP_WSBEiJ_G0010099.1 mouse_genomes_project 1 118971232 118971706 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020828.1 MGP_WSBEiJ_G0015756.1 mouse_genomes_project 1 94480746 94543175 - MGP_WSBEiJ_P0020828 Thap4 protein_coding protein_coding MGP_WSBEiJ_T0020829.1 MGP_WSBEiJ_G0015756.1 mouse_genomes_project 1 94485432 94520086 - MGP_WSBEiJ_P0020829 Thap4 protein_coding protein_coding MGP_WSBEiJ_T0020830.1 MGP_WSBEiJ_G0015756.1 mouse_genomes_project 1 94485435 94543259 - MGP_WSBEiJ_P0020830 Thap4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020831.1 MGP_WSBEiJ_G0015756.1 mouse_genomes_project 1 94485436 94503498 - MGP_WSBEiJ_P0020831 Thap4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020832.1 MGP_WSBEiJ_G0015756.1 mouse_genomes_project 1 94503295 94538381 - MGP_WSBEiJ_P0020832 Thap4 protein_coding protein_coding MGP_WSBEiJ_T0020833.1 MGP_WSBEiJ_G0015756.1 mouse_genomes_project 1 94512788 94543045 - Thap4 protein_coding retained_intron MGP_WSBEiJ_T0021797.1 MGP_WSBEiJ_G0015969.1 mouse_genomes_project 1 142722795 143110575 + MGP_WSBEiJ_P0021797 Kcnt2 protein_coding protein_coding MGP_WSBEiJ_T0021798.1 MGP_WSBEiJ_G0015969.1 mouse_genomes_project 1 142722807 143110872 + MGP_WSBEiJ_P0021798 Kcnt2 protein_coding protein_coding MGP_WSBEiJ_T0021799.1 MGP_WSBEiJ_G0015969.1 mouse_genomes_project 1 142722857 143110505 + MGP_WSBEiJ_P0021799 Kcnt2 protein_coding protein_coding MGP_WSBEiJ_T0021800.1 MGP_WSBEiJ_G0015969.1 mouse_genomes_project 1 142933551 142934557 + Kcnt2 protein_coding retained_intron MGP_WSBEiJ_T0021801.1 MGP_WSBEiJ_G0015969.1 mouse_genomes_project 1 142933716 143008739 + Kcnt2 protein_coding processed_transcript MGP_WSBEiJ_T0021802.1 MGP_WSBEiJ_G0015969.1 mouse_genomes_project 1 143002320 143073426 + MGP_WSBEiJ_P0021802 Kcnt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002837.1 MGP_WSBEiJ_G0002680.1 mouse_genomes_project 1 149124264 149197004 - Gm29514 antisense antisense MGP_WSBEiJ_T0000555.1 MGP_WSBEiJ_G0000500.1 mouse_genomes_project 1 109632918 109635525 + TEC TEC MGP_WSBEiJ_T0011730.1 MGP_WSBEiJ_G0009860.1 mouse_genomes_project 1 29073951 29074510 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020162.1 MGP_WSBEiJ_G0015613.1 mouse_genomes_project 1 78366551 78446775 - MGP_WSBEiJ_P0020162 Farsb protein_coding protein_coding MGP_WSBEiJ_T0020163.1 MGP_WSBEiJ_G0015613.1 mouse_genomes_project 1 78373646 78446813 - MGP_WSBEiJ_P0020163 Farsb protein_coding protein_coding MGP_WSBEiJ_T0020164.1 MGP_WSBEiJ_G0015613.1 mouse_genomes_project 1 78373663 78446778 - MGP_WSBEiJ_P0020164 Farsb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020165.1 MGP_WSBEiJ_G0015613.1 mouse_genomes_project 1 78420911 78446775 - MGP_WSBEiJ_P0020165 Farsb protein_coding protein_coding MGP_WSBEiJ_T0020166.1 MGP_WSBEiJ_G0015613.1 mouse_genomes_project 1 78429105 78446711 - Farsb protein_coding processed_transcript MGP_WSBEiJ_T0020167.1 MGP_WSBEiJ_G0015613.1 mouse_genomes_project 1 78430489 78446758 - MGP_WSBEiJ_P0020167 Farsb protein_coding protein_coding MGP_WSBEiJ_T0020168.1 MGP_WSBEiJ_G0015613.1 mouse_genomes_project 1 78435778 78446753 - Farsb protein_coding retained_intron MGP_WSBEiJ_T0100199.1 MGP_WSBEiJ_G0038761.1 mouse_genomes_project 1 18676150 18692492 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100200.1 MGP_WSBEiJ_G0038761.1 mouse_genomes_project 1 18676512 18692325 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100201.1 MGP_WSBEiJ_G0038761.1 mouse_genomes_project 1 18684230 18692427 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0000366.1 MGP_WSBEiJ_G0000314.1 mouse_genomes_project 1 14191375 14192200 + TEC TEC MGP_WSBEiJ_T0005930.1 MGP_WSBEiJ_G0004966.1 mouse_genomes_project 1 187827673 187828207 + Gm33973 lincRNA lincRNA MGP_WSBEiJ_T0005784.1 MGP_WSBEiJ_G0004850.1 mouse_genomes_project 1 119754644 119761268 + Gm28867 lincRNA lincRNA MGP_WSBEiJ_T0023562.1 MGP_WSBEiJ_G0016355.1 mouse_genomes_project 1 196607400 196613909 + MGP_WSBEiJ_P0023562 Slc30a1 protein_coding protein_coding MGP_WSBEiJ_T0023563.1 MGP_WSBEiJ_G0016355.1 mouse_genomes_project 1 196607889 196609803 + MGP_WSBEiJ_P0023563 Slc30a1 protein_coding protein_coding MGP_WSBEiJ_T0018222.1 MGP_WSBEiJ_G0015246.1 mouse_genomes_project 1 7102304 7110072 - MGP_WSBEiJ_P0018222 Tcf24 protein_coding protein_coding MGP_WSBEiJ_T0018223.1 MGP_WSBEiJ_G0015246.1 mouse_genomes_project 1 7102312 7104950 - MGP_WSBEiJ_P0018223 Tcf24 protein_coding protein_coding MGP_WSBEiJ_T0018391.1 MGP_WSBEiJ_G0015275.1 mouse_genomes_project 1 14222984 14270263 - MGP_WSBEiJ_P0018391 Jph1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018392.1 MGP_WSBEiJ_G0015275.1 mouse_genomes_project 1 14259469 14369859 - MGP_WSBEiJ_P0018392 Jph1 protein_coding protein_coding MGP_WSBEiJ_T0012100.1 MGP_WSBEiJ_G0010230.1 mouse_genomes_project 1 175475733 175476285 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000339.1 MGP_WSBEiJ_G0000287.1 mouse_genomes_project 1 5734891 5736052 - TEC TEC MGP_WSBEiJ_T0018451.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19737728 20250478 - MGP_WSBEiJ_P0018451 protein_coding protein_coding MGP_WSBEiJ_T0018452.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19737728 20250478 - MGP_WSBEiJ_P0018452 protein_coding protein_coding MGP_WSBEiJ_T0018453.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19737728 20250478 - MGP_WSBEiJ_P0018453 protein_coding protein_coding MGP_WSBEiJ_T0018454.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19737728 20250478 - MGP_WSBEiJ_P0018454 protein_coding protein_coding MGP_WSBEiJ_T0018455.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19737728 20250478 - MGP_WSBEiJ_P0018455 protein_coding protein_coding MGP_WSBEiJ_T0018456.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19738392 19769420 - MGP_WSBEiJ_P0018456 protein_coding protein_coding MGP_WSBEiJ_T0018457.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19739919 19893595 - MGP_WSBEiJ_P0018457 protein_coding protein_coding MGP_WSBEiJ_T0018458.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19739919 19977564 - MGP_WSBEiJ_P0018458 protein_coding unknown_likely_coding MGP_WSBEiJ_T0018459.1 MGP_WSBEiJ_G0015295.1 mouse_genomes_project 1 19898366 20250478 - MGP_WSBEiJ_P0018459 protein_coding protein_coding MGP_WSBEiJ_T0016376.1 MGP_WSBEiJ_G0014506.1 mouse_genomes_project 1 1540762 1543584 + Gm37587 processed_transcript retained_intron MGP_WSBEiJ_T0016377.1 MGP_WSBEiJ_G0014506.1 mouse_genomes_project 1 1541679 1543762 + Gm37587 processed_transcript antisense MGP_WSBEiJ_T0005908.1 MGP_WSBEiJ_G0004950.1 mouse_genomes_project 1 181468267 181477170 + Gm37306 lincRNA lincRNA MGP_WSBEiJ_T0019937.1 MGP_WSBEiJ_G0015580.1 mouse_genomes_project 1 74768343 74772263 - MGP_WSBEiJ_P0019937 Fev protein_coding protein_coding MGP_WSBEiJ_T0019938.1 MGP_WSBEiJ_G0015580.1 mouse_genomes_project 1 74768840 74772166 - MGP_WSBEiJ_P0019938 Fev protein_coding protein_coding MGP_WSBEiJ_T0019939.1 MGP_WSBEiJ_G0015580.1 mouse_genomes_project 1 74769241 74771457 - Fev protein_coding retained_intron MGP_WSBEiJ_T0016448.1 MGP_WSBEiJ_G0014532.1 mouse_genomes_project 1 140299942 140301078 + Gm4258 processed_transcript retained_intron MGP_WSBEiJ_T0016449.1 MGP_WSBEiJ_G0014532.1 mouse_genomes_project 1 140299945 140410494 + Gm4258 processed_transcript lincRNA MGP_WSBEiJ_T0000539.1 MGP_WSBEiJ_G0000484.1 mouse_genomes_project 1 94299404 94301785 + TEC TEC MGP_WSBEiJ_T0005692.1 MGP_WSBEiJ_G0004775.1 mouse_genomes_project 1 71684468 71733568 - 4933417E11Rik lincRNA lincRNA MGP_WSBEiJ_T0000667.1 MGP_WSBEiJ_G0000610.1 mouse_genomes_project 1 160189861 160192164 + TEC TEC MGP_WSBEiJ_T0000424.1 MGP_WSBEiJ_G0000369.1 mouse_genomes_project 1 35846219 35848438 - TEC TEC MGP_WSBEiJ_T0000569.1 MGP_WSBEiJ_G0000514.1 mouse_genomes_project 1 124984849 124986892 - TEC TEC MGP_WSBEiJ_T0005776.1 MGP_WSBEiJ_G0004844.1 mouse_genomes_project 1 108610061 108612274 - Gm15391 lincRNA lincRNA MGP_WSBEiJ_T0020425.1 MGP_WSBEiJ_G0015669.1 mouse_genomes_project 1 87397814 87401032 - MGP_WSBEiJ_P0020425 Alppl2 protein_coding protein_coding MGP_WSBEiJ_T0020426.1 MGP_WSBEiJ_G0015669.1 mouse_genomes_project 1 87397815 87401049 - MGP_WSBEiJ_P0020426 Alppl2 protein_coding protein_coding MGP_WSBEiJ_T0020427.1 MGP_WSBEiJ_G0015669.1 mouse_genomes_project 1 87399900 87400926 - Alppl2 protein_coding retained_intron MGP_WSBEiJ_T0000684.1 MGP_WSBEiJ_G0000627.1 mouse_genomes_project 1 164071783 164072210 - TEC TEC MGP_WSBEiJ_T0000662.1 MGP_WSBEiJ_G0000605.1 mouse_genomes_project 1 159559326 159561920 + TEC TEC MGP_WSBEiJ_T0023051.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180717293 180796760 - MGP_WSBEiJ_P0023051 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0023052.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180717302 180806665 - MGP_WSBEiJ_P0023052 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0023053.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180717302 180738908 - MGP_WSBEiJ_P0023053 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0023054.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180717303 180782128 - MGP_WSBEiJ_P0023054 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0023055.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180717741 180734390 - Cep170 protein_coding retained_intron MGP_WSBEiJ_T0023056.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180717779 180740091 - MGP_WSBEiJ_P0023056 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0023057.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180717981 180782138 - MGP_WSBEiJ_P0023057 Cep170 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023058.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180718790 180734039 - MGP_WSBEiJ_P0023058 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0023059.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180719228 180737972 - Cep170 protein_coding processed_transcript MGP_WSBEiJ_T0023060.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180724125 180726898 - Cep170 protein_coding retained_intron MGP_WSBEiJ_T0023061.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180756854 180763587 - Cep170 protein_coding retained_intron MGP_WSBEiJ_T0023062.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180758613 180768730 - MGP_WSBEiJ_P0023062 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0023063.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180763721 180806665 - MGP_WSBEiJ_P0023063 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0023064.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180776054 180796766 - Cep170 protein_coding retained_intron MGP_WSBEiJ_T0023065.1 MGP_WSBEiJ_G0016250.1 mouse_genomes_project 1 180776131 180796760 - MGP_WSBEiJ_P0023065 Cep170 protein_coding protein_coding MGP_WSBEiJ_T0011694.1 MGP_WSBEiJ_G0009824.1 mouse_genomes_project 1 14678335 14678807 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021597.1 MGP_WSBEiJ_G0015929.1 mouse_genomes_project 1 137394151 137407722 + MGP_WSBEiJ_P0021597 Arl8a protein_coding protein_coding MGP_WSBEiJ_T0021598.1 MGP_WSBEiJ_G0015929.1 mouse_genomes_project 1 137394996 137407722 + MGP_WSBEiJ_P0021598 Arl8a protein_coding protein_coding MGP_WSBEiJ_T0021599.1 MGP_WSBEiJ_G0015929.1 mouse_genomes_project 1 137399214 137403400 + Arl8a protein_coding retained_intron MGP_WSBEiJ_T0021600.1 MGP_WSBEiJ_G0015929.1 mouse_genomes_project 1 137403286 137406764 + Arl8a protein_coding retained_intron MGP_WSBEiJ_T0005899.1 MGP_WSBEiJ_G0004941.1 mouse_genomes_project 1 172872265 172891190 - Gm37839 lincRNA lincRNA MGP_WSBEiJ_T0018475.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21469186 21485100 - MGP_WSBEiJ_P0018475 Fam135a protein_coding protein_coding MGP_WSBEiJ_T0018476.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21469186 21546380 - MGP_WSBEiJ_P0018476 Fam135a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018477.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21469338 21560064 - MGP_WSBEiJ_P0018477 Fam135a protein_coding protein_coding MGP_WSBEiJ_T0018478.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21469684 21560052 - MGP_WSBEiJ_P0018478 Fam135a protein_coding protein_coding MGP_WSBEiJ_T0018479.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21469697 21487435 - MGP_WSBEiJ_P0018479 Fam135a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018480.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21469774 21560203 - MGP_WSBEiJ_P0018480 Fam135a protein_coding protein_coding MGP_WSBEiJ_T0018481.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21482639 21486799 - MGP_WSBEiJ_P0018481 Fam135a protein_coding protein_coding MGP_WSBEiJ_T0018482.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21487070 21560086 - MGP_WSBEiJ_P0018482 Fam135a protein_coding protein_coding MGP_WSBEiJ_T0018483.1 MGP_WSBEiJ_G0015301.1 mouse_genomes_project 1 21511092 21560211 - Fam135a protein_coding retained_intron MGP_WSBEiJ_T0012129.1 MGP_WSBEiJ_G0010259.1 mouse_genomes_project 1 195625097 195625302 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011991.1 MGP_WSBEiJ_G0010121.1 mouse_genomes_project 1 124850807 124853438 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022900.1 MGP_WSBEiJ_G0016191.1 mouse_genomes_project 1 176074643 176083314 - MGP_WSBEiJ_P0022900 Kcnj9 protein_coding protein_coding MGP_WSBEiJ_T0022901.1 MGP_WSBEiJ_G0016191.1 mouse_genomes_project 1 176076239 176083278 - MGP_WSBEiJ_P0022901 Kcnj9 protein_coding protein_coding MGP_WSBEiJ_T0022902.1 MGP_WSBEiJ_G0016191.1 mouse_genomes_project 1 176079295 176082103 - Kcnj9 protein_coding retained_intron MGP_WSBEiJ_T0019558.1 MGP_WSBEiJ_G0015503.1 mouse_genomes_project 1 62571860 62615466 + MGP_WSBEiJ_P0019558 Zdbf2 protein_coding protein_coding MGP_WSBEiJ_T0019559.1 MGP_WSBEiJ_G0015503.1 mouse_genomes_project 1 62571864 62594955 + MGP_WSBEiJ_P0019559 Zdbf2 protein_coding protein_coding MGP_WSBEiJ_T0019560.1 MGP_WSBEiJ_G0015503.1 mouse_genomes_project 1 62591061 62615465 + MGP_WSBEiJ_P0019560 Zdbf2 protein_coding protein_coding MGP_WSBEiJ_T0000755.1 MGP_WSBEiJ_G0000696.1 mouse_genomes_project 1 191498779 191501077 - TEC TEC MGP_WSBEiJ_T0005665.1 MGP_WSBEiJ_G0004754.1 mouse_genomes_project 1 60518367 60524210 + Gm11587 lincRNA lincRNA MGP_WSBEiJ_T0011899.1 MGP_WSBEiJ_G0010029.1 mouse_genomes_project 1 86559469 86560304 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018533.1 MGP_WSBEiJ_G0015313.1 mouse_genomes_project 1 29015583 29017034 + MGP_WSBEiJ_P0018533 Pih1d3 protein_coding protein_coding MGP_WSBEiJ_T0012068.1 MGP_WSBEiJ_G0010198.1 mouse_genomes_project 1 162660538 162661035 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005749.1 MGP_WSBEiJ_G0004821.1 mouse_genomes_project 1 92082161 92083316 - 1700020N18Rik lincRNA lincRNA MGP_WSBEiJ_T0000506.1 MGP_WSBEiJ_G0000451.1 mouse_genomes_project 1 82195386 82197191 + TEC TEC MGP_WSBEiJ_T0011746.1 MGP_WSBEiJ_G0009876.1 mouse_genomes_project 1 32612072 32612307 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020288.1 MGP_WSBEiJ_G0015640.1 mouse_genomes_project 1 84199478 84449420 - MGP_WSBEiJ_P0020288 Pid1 protein_coding protein_coding MGP_WSBEiJ_T0020289.1 MGP_WSBEiJ_G0015640.1 mouse_genomes_project 1 84200413 84510028 - MGP_WSBEiJ_P0020289 Pid1 protein_coding protein_coding MGP_WSBEiJ_T0020290.1 MGP_WSBEiJ_G0015640.1 mouse_genomes_project 1 84201108 84217322 - Pid1 protein_coding processed_transcript MGP_WSBEiJ_T0020291.1 MGP_WSBEiJ_G0015640.1 mouse_genomes_project 1 84248568 84449198 - MGP_WSBEiJ_P0020291 Pid1 protein_coding protein_coding MGP_WSBEiJ_T0020292.1 MGP_WSBEiJ_G0015640.1 mouse_genomes_project 1 84278363 84532986 - MGP_WSBEiJ_P0020292 Pid1 protein_coding protein_coding MGP_WSBEiJ_T0020293.1 MGP_WSBEiJ_G0015640.1 mouse_genomes_project 1 84285897 84514478 - MGP_WSBEiJ_P0020293 Pid1 protein_coding protein_coding MGP_WSBEiJ_T0020294.1 MGP_WSBEiJ_G0015640.1 mouse_genomes_project 1 84327945 84449386 - MGP_WSBEiJ_P0020294 Pid1 protein_coding protein_coding MGP_WSBEiJ_T0020295.1 MGP_WSBEiJ_G0015640.1 mouse_genomes_project 1 84447967 84449398 - Pid1 protein_coding retained_intron MGP_WSBEiJ_T0022172.1 MGP_WSBEiJ_G0016038.1 mouse_genomes_project 1 160254416 160263894 - MGP_WSBEiJ_P0022172 Tex35 protein_coding protein_coding MGP_WSBEiJ_T0022173.1 MGP_WSBEiJ_G0016038.1 mouse_genomes_project 1 160254416 160263894 - MGP_WSBEiJ_P0022173 Tex35 protein_coding protein_coding MGP_WSBEiJ_T0022174.1 MGP_WSBEiJ_G0016038.1 mouse_genomes_project 1 160254424 160263893 - MGP_WSBEiJ_P0022174 Tex35 protein_coding protein_coding MGP_WSBEiJ_T0022175.1 MGP_WSBEiJ_G0016038.1 mouse_genomes_project 1 160254431 160263924 - MGP_WSBEiJ_P0022175 Tex35 protein_coding protein_coding MGP_WSBEiJ_T0022176.1 MGP_WSBEiJ_G0016038.1 mouse_genomes_project 1 160254590 160263632 - MGP_WSBEiJ_P0022176 Tex35 protein_coding protein_coding MGP_WSBEiJ_T0022177.1 MGP_WSBEiJ_G0016038.1 mouse_genomes_project 1 160254592 160263889 - MGP_WSBEiJ_P0022177 Tex35 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097521.1 MGP_WSBEiJ_G0036184.1 mouse_genomes_project 1 7693145 7693252 - Gm25253 snRNA snRNA MGP_WSBEiJ_T0002736.1 MGP_WSBEiJ_G0002605.1 mouse_genomes_project 1 51987800 51989386 + Gm28777 antisense antisense MGP_WSBEiJ_T0012048.1 MGP_WSBEiJ_G0010178.1 mouse_genomes_project 1 154128558 154128675 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018323.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11349383 11501223 - MGP_WSBEiJ_P0018323 Eya1 protein_coding protein_coding MGP_WSBEiJ_T0018324.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11349387 11501258 - MGP_WSBEiJ_P0018324 Eya1 protein_coding protein_coding MGP_WSBEiJ_T0018325.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11350095 11501142 - MGP_WSBEiJ_P0018325 Eya1 protein_coding protein_coding MGP_WSBEiJ_T0018326.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11351072 11495559 - MGP_WSBEiJ_P0018326 Eya1 protein_coding protein_coding MGP_WSBEiJ_T0018327.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11392811 11418286 - MGP_WSBEiJ_P0018327 Eya1 protein_coding protein_coding MGP_WSBEiJ_T0018328.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11440086 11495608 - MGP_WSBEiJ_P0018328 Eya1 protein_coding protein_coding MGP_WSBEiJ_T0018329.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11460661 11495617 - MGP_WSBEiJ_P0018329 Eya1 protein_coding protein_coding MGP_WSBEiJ_T0018330.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11460729 11500859 - MGP_WSBEiJ_P0018330 Eya1 protein_coding protein_coding MGP_WSBEiJ_T0018331.1 MGP_WSBEiJ_G0015261.1 mouse_genomes_project 1 11492192 11501074 - Eya1 protein_coding retained_intron MGP_WSBEiJ_T0098764.1 MGP_WSBEiJ_G0037427.1 mouse_genomes_project 1 65720081 65720218 + Gm24729 snoRNA snoRNA MGP_WSBEiJ_T0012093.1 MGP_WSBEiJ_G0010223.1 mouse_genomes_project 1 173194499 173195108 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011877.1 MGP_WSBEiJ_G0010007.1 mouse_genomes_project 1 75410592 75411084 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100437.1 MGP_WSBEiJ_G0038896.1 mouse_genomes_project 1 178102839 178104220 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0023408.1 MGP_WSBEiJ_G0016325.1 mouse_genomes_project 1 191028875 191118093 - MGP_WSBEiJ_P0023408 Tgfb2 protein_coding protein_coding MGP_WSBEiJ_T0023409.1 MGP_WSBEiJ_G0016325.1 mouse_genomes_project 1 191030295 191117804 - MGP_WSBEiJ_P0023409 Tgfb2 protein_coding protein_coding MGP_WSBEiJ_T0023410.1 MGP_WSBEiJ_G0016325.1 mouse_genomes_project 1 191031657 191058319 - Tgfb2 protein_coding retained_intron MGP_WSBEiJ_T0023411.1 MGP_WSBEiJ_G0016325.1 mouse_genomes_project 1 191034805 191058385 - Tgfb2 protein_coding retained_intron MGP_WSBEiJ_T0023412.1 MGP_WSBEiJ_G0016325.1 mouse_genomes_project 1 191038706 191077231 - Tgfb2 protein_coding processed_transcript MGP_WSBEiJ_T0023413.1 MGP_WSBEiJ_G0016325.1 mouse_genomes_project 1 191101745 191116437 - Tgfb2 protein_coding processed_transcript MGP_WSBEiJ_T0012014.1 MGP_WSBEiJ_G0010144.1 mouse_genomes_project 1 140800314 140800465 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012096.1 MGP_WSBEiJ_G0010226.1 mouse_genomes_project 1 174997697 174997857 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012021.1 MGP_WSBEiJ_G0010151.1 mouse_genomes_project 1 142455767 142456188 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011061.1 MGP_WSBEiJ_G0009218.1 mouse_genomes_project 1 133104035 133104388 - Gm25717 misc_RNA misc_RNA MGP_WSBEiJ_T0016415.1 MGP_WSBEiJ_G0014523.1 mouse_genomes_project 1 86593332 86601732 + C130036L24Rik processed_transcript retained_intron MGP_WSBEiJ_T0016416.1 MGP_WSBEiJ_G0014523.1 mouse_genomes_project 1 86593342 86608388 + C130036L24Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016417.1 MGP_WSBEiJ_G0014523.1 mouse_genomes_project 1 86593346 86596533 + C130036L24Rik processed_transcript retained_intron MGP_WSBEiJ_T0012126.1 MGP_WSBEiJ_G0010256.1 mouse_genomes_project 1 193811963 193812344 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021442.1 MGP_WSBEiJ_G0015891.1 mouse_genomes_project 1 135211591 135223558 + MGP_WSBEiJ_P0021442 Ppp1r15b protein_coding protein_coding MGP_WSBEiJ_T0021443.1 MGP_WSBEiJ_G0015891.1 mouse_genomes_project 1 135211792 135223558 + Ppp1r15b protein_coding processed_transcript MGP_WSBEiJ_T0005756.1 MGP_WSBEiJ_G0004828.1 mouse_genomes_project 1 93489183 93492205 - lincRNA lincRNA MGP_WSBEiJ_T0011766.1 MGP_WSBEiJ_G0009896.1 mouse_genomes_project 1 41922871 41923251 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000494.1 MGP_WSBEiJ_G0000439.1 mouse_genomes_project 1 78320182 78320999 + TEC TEC MGP_WSBEiJ_T0011872.1 MGP_WSBEiJ_G0010002.1 mouse_genomes_project 1 71413442 71413748 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011832.1 MGP_WSBEiJ_G0009962.1 mouse_genomes_project 1 59458689 59458916 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097241.1 MGP_WSBEiJ_G0035922.1 mouse_genomes_project 1 74135711 74138014 + Gm29358 sense_intronic sense_intronic MGP_WSBEiJ_T0097242.1 MGP_WSBEiJ_G0035922.1 mouse_genomes_project 1 74135749 74138976 + Gm29358 sense_intronic sense_intronic MGP_WSBEiJ_T0009381.1 MGP_WSBEiJ_G0007538.1 mouse_genomes_project 1 129999613 129999683 + Mir128-1 miRNA miRNA MGP_WSBEiJ_T0021382.1 MGP_WSBEiJ_G0015879.1 mouse_genomes_project 1 134264272 134264992 - MGP_WSBEiJ_P0021382 Gm10188 protein_coding protein_coding MGP_WSBEiJ_T0021088.1 MGP_WSBEiJ_G0015815.1 mouse_genomes_project 1 121579873 121587631 - MGP_WSBEiJ_P0021088 Dbi protein_coding protein_coding MGP_WSBEiJ_T0021089.1 MGP_WSBEiJ_G0015815.1 mouse_genomes_project 1 121579877 121587570 - MGP_WSBEiJ_P0021089 Dbi protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021090.1 MGP_WSBEiJ_G0015815.1 mouse_genomes_project 1 121579956 121586723 - Dbi protein_coding processed_transcript MGP_WSBEiJ_T0021091.1 MGP_WSBEiJ_G0015815.1 mouse_genomes_project 1 121579987 121587490 - MGP_WSBEiJ_P0021091 Dbi protein_coding protein_coding MGP_WSBEiJ_T0021092.1 MGP_WSBEiJ_G0015815.1 mouse_genomes_project 1 121582597 121587600 - Dbi protein_coding retained_intron MGP_WSBEiJ_T0021093.1 MGP_WSBEiJ_G0015815.1 mouse_genomes_project 1 121586310 121587567 - Dbi protein_coding retained_intron MGP_WSBEiJ_T0098801.1 MGP_WSBEiJ_G0037464.1 mouse_genomes_project 1 157134605 157134710 - Gm25336 snoRNA snoRNA MGP_WSBEiJ_T0000612.1 MGP_WSBEiJ_G0000556.1 mouse_genomes_project 1 138202990 138205686 - TEC TEC MGP_WSBEiJ_T0000584.1 MGP_WSBEiJ_G0000529.1 mouse_genomes_project 1 129927512 129930008 + TEC TEC MGP_WSBEiJ_T0005857.1 MGP_WSBEiJ_G0004909.1 mouse_genomes_project 1 157090248 157170186 - A830008E24Rik lincRNA lincRNA MGP_WSBEiJ_T0005858.1 MGP_WSBEiJ_G0004909.1 mouse_genomes_project 1 157102552 157173102 - A830008E24Rik lincRNA lincRNA MGP_WSBEiJ_T0022589.1 MGP_WSBEiJ_G0016119.1 mouse_genomes_project 1 170791773 170824539 + MGP_WSBEiJ_P0022589 Tmco1 protein_coding protein_coding MGP_WSBEiJ_T0022590.1 MGP_WSBEiJ_G0016119.1 mouse_genomes_project 1 170792065 170824539 + MGP_WSBEiJ_P0022590 Tmco1 protein_coding protein_coding MGP_WSBEiJ_T0022591.1 MGP_WSBEiJ_G0016119.1 mouse_genomes_project 1 170792131 170827702 + MGP_WSBEiJ_P0022591 Tmco1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022592.1 MGP_WSBEiJ_G0016119.1 mouse_genomes_project 1 170807477 170824354 + MGP_WSBEiJ_P0022592 Tmco1 protein_coding protein_coding MGP_WSBEiJ_T0021679.1 MGP_WSBEiJ_G0015944.1 mouse_genomes_project 1 138270414 138302362 - MGP_WSBEiJ_P0021679 Igfn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021680.1 MGP_WSBEiJ_G0015944.1 mouse_genomes_project 1 138270796 138280329 - MGP_WSBEiJ_P0021680 Igfn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021681.1 MGP_WSBEiJ_G0015944.1 mouse_genomes_project 1 138270803 138323612 - MGP_WSBEiJ_P0021681 Igfn1 protein_coding protein_coding MGP_WSBEiJ_T0021682.1 MGP_WSBEiJ_G0015944.1 mouse_genomes_project 1 138271816 138299703 - MGP_WSBEiJ_P0021682 Igfn1 protein_coding protein_coding MGP_WSBEiJ_T0020557.1 MGP_WSBEiJ_G0015698.1 mouse_genomes_project 1 89592663 89673026 + MGP_WSBEiJ_P0020557 Sh3bp4 protein_coding protein_coding MGP_WSBEiJ_T0020558.1 MGP_WSBEiJ_G0015698.1 mouse_genomes_project 1 89592701 89630827 + Sh3bp4 protein_coding processed_transcript MGP_WSBEiJ_T0022362.1 MGP_WSBEiJ_G0016069.1 mouse_genomes_project 1 166044539 166055917 + MGP_WSBEiJ_P0022362 Myoc protein_coding protein_coding MGP_WSBEiJ_T0002681.1 MGP_WSBEiJ_G0002565.1 mouse_genomes_project 1 3246899 3252329 - 4732440D04Rik antisense antisense MGP_WSBEiJ_T0002682.1 MGP_WSBEiJ_G0002565.1 mouse_genomes_project 1 3250328 3251626 - 4732440D04Rik antisense antisense MGP_WSBEiJ_T0002683.1 MGP_WSBEiJ_G0002565.1 mouse_genomes_project 1 3251647 3252328 - 4732440D04Rik antisense antisense MGP_WSBEiJ_T0023304.1 MGP_WSBEiJ_G0016301.1 mouse_genomes_project 1 186787593 186841064 - MGP_WSBEiJ_P0023304 Capn2 protein_coding protein_coding MGP_WSBEiJ_T0023305.1 MGP_WSBEiJ_G0016301.1 mouse_genomes_project 1 186790547 186800167 - Capn2 protein_coding retained_intron MGP_WSBEiJ_T0023306.1 MGP_WSBEiJ_G0016301.1 mouse_genomes_project 1 186792878 186801854 - Capn2 protein_coding retained_intron MGP_WSBEiJ_T0023307.1 MGP_WSBEiJ_G0016301.1 mouse_genomes_project 1 186804247 186814416 - Capn2 protein_coding retained_intron MGP_WSBEiJ_T0023308.1 MGP_WSBEiJ_G0016301.1 mouse_genomes_project 1 186804252 186841148 - Capn2 protein_coding retained_intron MGP_WSBEiJ_T0022905.1 MGP_WSBEiJ_G0016194.1 mouse_genomes_project 1 176237713 176240929 + MGP_WSBEiJ_P0022905 Slamf9 protein_coding protein_coding MGP_WSBEiJ_T0023293.1 MGP_WSBEiJ_G0016298.1 mouse_genomes_project 1 186582423 186589456 - MGP_WSBEiJ_P0023293 Degs1 protein_coding protein_coding MGP_WSBEiJ_T0023294.1 MGP_WSBEiJ_G0016298.1 mouse_genomes_project 1 186585148 186589456 - Degs1 protein_coding retained_intron MGP_WSBEiJ_T0023295.1 MGP_WSBEiJ_G0016298.1 mouse_genomes_project 1 186585655 186588876 - MGP_WSBEiJ_P0023295 Degs1 protein_coding protein_coding MGP_WSBEiJ_T0002858.1 MGP_WSBEiJ_G0002698.1 mouse_genomes_project 1 164518508 164523232 - 4930469G21Rik antisense antisense MGP_WSBEiJ_T0002859.1 MGP_WSBEiJ_G0002698.1 mouse_genomes_project 1 164520793 164523232 - 4930469G21Rik antisense antisense MGP_WSBEiJ_T0011821.1 MGP_WSBEiJ_G0009951.1 mouse_genomes_project 1 54278867 54279759 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021850.1 MGP_WSBEiJ_G0015980.1 mouse_genomes_project 1 149196703 149629387 + MGP_WSBEiJ_P0021850 Brinp3 protein_coding protein_coding MGP_WSBEiJ_T0021851.1 MGP_WSBEiJ_G0015980.1 mouse_genomes_project 1 149199557 149462670 + MGP_WSBEiJ_P0021851 Brinp3 protein_coding protein_coding MGP_WSBEiJ_T0021852.1 MGP_WSBEiJ_G0015980.1 mouse_genomes_project 1 149199630 149629388 + MGP_WSBEiJ_P0021852 Brinp3 protein_coding protein_coding MGP_WSBEiJ_T0021853.1 MGP_WSBEiJ_G0015980.1 mouse_genomes_project 1 149199647 149629382 + MGP_WSBEiJ_P0021853 Brinp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021854.1 MGP_WSBEiJ_G0015980.1 mouse_genomes_project 1 149199681 149221521 + Brinp3 protein_coding retained_intron MGP_WSBEiJ_T0000656.1 MGP_WSBEiJ_G0000599.1 mouse_genomes_project 1 156928974 156931515 - TEC TEC MGP_WSBEiJ_T0011933.1 MGP_WSBEiJ_G0010063.1 mouse_genomes_project 1 105560999 105561475 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020863.1 MGP_WSBEiJ_G0015764.1 mouse_genomes_project 1 94834989 94839918 + MGP_WSBEiJ_P0020863 Neu4 protein_coding protein_coding MGP_WSBEiJ_T0020864.1 MGP_WSBEiJ_G0015764.1 mouse_genomes_project 1 94835031 94842835 + MGP_WSBEiJ_P0020864 Neu4 protein_coding protein_coding MGP_WSBEiJ_T0002883.1 MGP_WSBEiJ_G0002715.1 mouse_genomes_project 1 175375295 175376446 + Gm37787 antisense antisense MGP_WSBEiJ_T0020998.1 MGP_WSBEiJ_G0015799.1 mouse_genomes_project 1 113175172 113181239 - Dsel protein_coding processed_transcript MGP_WSBEiJ_T0020999.1 MGP_WSBEiJ_G0015799.1 mouse_genomes_project 1 113175176 113181389 - MGP_WSBEiJ_P0020999 Dsel protein_coding protein_coding MGP_WSBEiJ_T0021000.1 MGP_WSBEiJ_G0015799.1 mouse_genomes_project 1 113179793 113181354 - Dsel protein_coding processed_transcript MGP_WSBEiJ_T0021001.1 MGP_WSBEiJ_G0015799.1 mouse_genomes_project 1 113180565 113181351 - Dsel protein_coding processed_transcript MGP_WSBEiJ_T0012006.1 MGP_WSBEiJ_G0010136.1 mouse_genomes_project 1 134323810 134324173 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000533.1 MGP_WSBEiJ_G0000478.1 mouse_genomes_project 1 91161440 91164234 + TEC TEC MGP_WSBEiJ_T0011754.1 MGP_WSBEiJ_G0009884.1 mouse_genomes_project 1 32984718 32984953 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009332.1 MGP_WSBEiJ_G0007489.1 mouse_genomes_project 1 34404155 34404232 - Mir6898 miRNA miRNA MGP_WSBEiJ_T0018293.1 MGP_WSBEiJ_G0015254.1 mouse_genomes_project 1 9840726 10012455 + MGP_WSBEiJ_P0018293 Sulf1 protein_coding protein_coding MGP_WSBEiJ_T0018294.1 MGP_WSBEiJ_G0015254.1 mouse_genomes_project 1 9869329 9978939 + Sulf1 protein_coding retained_intron MGP_WSBEiJ_T0018295.1 MGP_WSBEiJ_G0015254.1 mouse_genomes_project 1 9870334 9940938 + MGP_WSBEiJ_P0018295 Sulf1 protein_coding protein_coding MGP_WSBEiJ_T0018296.1 MGP_WSBEiJ_G0015254.1 mouse_genomes_project 1 9878826 9941028 + MGP_WSBEiJ_P0018296 Sulf1 protein_coding protein_coding MGP_WSBEiJ_T0018297.1 MGP_WSBEiJ_G0015254.1 mouse_genomes_project 1 9939831 9943207 + Sulf1 protein_coding retained_intron MGP_WSBEiJ_T0018298.1 MGP_WSBEiJ_G0015254.1 mouse_genomes_project 1 9939917 10023120 + MGP_WSBEiJ_P0018298 Sulf1 protein_coding protein_coding MGP_WSBEiJ_T0018299.1 MGP_WSBEiJ_G0015254.1 mouse_genomes_project 1 9991027 9995497 + Sulf1 protein_coding retained_intron MGP_WSBEiJ_T0018300.1 MGP_WSBEiJ_G0015254.1 mouse_genomes_project 1 10002764 10023114 + MGP_WSBEiJ_P0018300 Sulf1 protein_coding protein_coding MGP_WSBEiJ_T0011669.1 MGP_WSBEiJ_G0009799.1 mouse_genomes_project 1 4812345 4815592 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019618.1 MGP_WSBEiJ_G0015517.1 mouse_genomes_project 1 64409878 64414133 - MGP_WSBEiJ_P0019618 Crygd protein_coding protein_coding MGP_WSBEiJ_T0019619.1 MGP_WSBEiJ_G0015517.1 mouse_genomes_project 1 64410351 64411335 - MGP_WSBEiJ_P0019619 Crygd protein_coding protein_coding MGP_WSBEiJ_T0019620.1 MGP_WSBEiJ_G0015517.1 mouse_genomes_project 1 64410739 64414133 - Crygd protein_coding retained_intron MGP_WSBEiJ_T0012051.1 MGP_WSBEiJ_G0010181.1 mouse_genomes_project 1 155050334 155051139 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020671.1 MGP_WSBEiJ_G0015721.1 mouse_genomes_project 1 92221220 92227699 + Asb1 protein_coding processed_transcript MGP_WSBEiJ_T0020672.1 MGP_WSBEiJ_G0015721.1 mouse_genomes_project 1 92221385 92239263 + MGP_WSBEiJ_P0020672 Asb1 protein_coding protein_coding MGP_WSBEiJ_T0020673.1 MGP_WSBEiJ_G0015721.1 mouse_genomes_project 1 92221385 92239263 + MGP_WSBEiJ_P0020673 Asb1 protein_coding protein_coding MGP_WSBEiJ_T0020674.1 MGP_WSBEiJ_G0015721.1 mouse_genomes_project 1 92221466 92244098 + MGP_WSBEiJ_P0020674 Asb1 protein_coding protein_coding MGP_WSBEiJ_T0020675.1 MGP_WSBEiJ_G0015721.1 mouse_genomes_project 1 92221733 92235537 + MGP_WSBEiJ_P0020675 Asb1 protein_coding protein_coding MGP_WSBEiJ_T0020676.1 MGP_WSBEiJ_G0015721.1 mouse_genomes_project 1 92221733 92239556 + MGP_WSBEiJ_P0020676 Asb1 protein_coding protein_coding MGP_WSBEiJ_T0002742.1 MGP_WSBEiJ_G0002610.1 mouse_genomes_project 1 58112042 58161374 + Gm29018 antisense antisense MGP_WSBEiJ_T0002743.1 MGP_WSBEiJ_G0002610.1 mouse_genomes_project 1 58133856 58135708 + Gm29018 antisense antisense MGP_WSBEiJ_T0005913.1 MGP_WSBEiJ_G0004954.1 mouse_genomes_project 1 184696355 184707151 - Gm37267 lincRNA lincRNA MGP_WSBEiJ_T0005786.1 MGP_WSBEiJ_G0004852.1 mouse_genomes_project 1 120737639 120760625 - Gm29456 lincRNA lincRNA MGP_WSBEiJ_T0020319.1 MGP_WSBEiJ_G0015643.1 mouse_genomes_project 1 85008428 85080109 + MGP_WSBEiJ_P0020319 Fbxo36 protein_coding protein_coding MGP_WSBEiJ_T0020320.1 MGP_WSBEiJ_G0015643.1 mouse_genomes_project 1 85008440 85080109 + Fbxo36 protein_coding processed_transcript MGP_WSBEiJ_T0020321.1 MGP_WSBEiJ_G0015643.1 mouse_genomes_project 1 85038902 85080109 + Fbxo36 protein_coding processed_transcript MGP_WSBEiJ_T0020322.1 MGP_WSBEiJ_G0015643.1 mouse_genomes_project 1 85041629 85080109 + Fbxo36 protein_coding processed_transcript MGP_WSBEiJ_T0000371.1 MGP_WSBEiJ_G0000319.1 mouse_genomes_project 1 19296000 19297351 - TEC TEC MGP_WSBEiJ_T0000338.1 MGP_WSBEiJ_G0000286.1 mouse_genomes_project 1 5618589 5622665 - TEC TEC MGP_WSBEiJ_T0100433.1 MGP_WSBEiJ_G0038892.1 mouse_genomes_project 1 177971345 177971889 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0021222.1 MGP_WSBEiJ_G0015840.1 mouse_genomes_project 1 130097536 130149098 - MGP_WSBEiJ_P0021222 Lct protein_coding protein_coding MGP_WSBEiJ_T0021223.1 MGP_WSBEiJ_G0015840.1 mouse_genomes_project 1 130100352 130106387 - Lct protein_coding retained_intron MGP_WSBEiJ_T0000585.1 MGP_WSBEiJ_G0000530.1 mouse_genomes_project 1 129939695 129942440 + TEC TEC MGP_WSBEiJ_T0011751.1 MGP_WSBEiJ_G0009881.1 mouse_genomes_project 1 32922941 32925078 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000750.1 MGP_WSBEiJ_G0000691.1 mouse_genomes_project 1 189670921 189673354 + TEC TEC MGP_WSBEiJ_T0023547.1 MGP_WSBEiJ_G0016352.1 mouse_genomes_project 1 196236813 196285618 + MGP_WSBEiJ_P0023547 Ints7 protein_coding protein_coding MGP_WSBEiJ_T0023548.1 MGP_WSBEiJ_G0016352.1 mouse_genomes_project 1 196236903 196269740 + Ints7 protein_coding retained_intron MGP_WSBEiJ_T0023549.1 MGP_WSBEiJ_G0016352.1 mouse_genomes_project 1 196236918 196283576 + MGP_WSBEiJ_P0023549 Ints7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023550.1 MGP_WSBEiJ_G0016352.1 mouse_genomes_project 1 196236938 196268356 + MGP_WSBEiJ_P0023550 Ints7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023551.1 MGP_WSBEiJ_G0016352.1 mouse_genomes_project 1 196236938 196284676 + MGP_WSBEiJ_P0023551 Ints7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023552.1 MGP_WSBEiJ_G0016352.1 mouse_genomes_project 1 196236952 196244771 + Ints7 protein_coding retained_intron MGP_WSBEiJ_T0018724.1 MGP_WSBEiJ_G0015347.1 mouse_genomes_project 1 34888342 35041708 - MGP_WSBEiJ_P0018724 Tmem131 protein_coding protein_coding MGP_WSBEiJ_T0018725.1 MGP_WSBEiJ_G0015347.1 mouse_genomes_project 1 34888344 35042003 - MGP_WSBEiJ_P0018725 Tmem131 protein_coding protein_coding MGP_WSBEiJ_T0018726.1 MGP_WSBEiJ_G0015347.1 mouse_genomes_project 1 34897110 34914952 - Tmem131 protein_coding retained_intron MGP_WSBEiJ_T0018727.1 MGP_WSBEiJ_G0015347.1 mouse_genomes_project 1 34906426 34908418 - Tmem131 protein_coding retained_intron MGP_WSBEiJ_T0018728.1 MGP_WSBEiJ_G0015347.1 mouse_genomes_project 1 34912018 34917133 - MGP_WSBEiJ_P0018728 Tmem131 protein_coding protein_coding MGP_WSBEiJ_T0018729.1 MGP_WSBEiJ_G0015347.1 mouse_genomes_project 1 34913787 34917524 - MGP_WSBEiJ_P0018729 Tmem131 protein_coding protein_coding MGP_WSBEiJ_T0018730.1 MGP_WSBEiJ_G0015347.1 mouse_genomes_project 1 34917031 34923826 - MGP_WSBEiJ_P0018730 Tmem131 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018731.1 MGP_WSBEiJ_G0015347.1 mouse_genomes_project 1 34940617 35045843 - MGP_WSBEiJ_P0018731 Tmem131 protein_coding protein_coding MGP_WSBEiJ_T0022953.1 MGP_WSBEiJ_G0016211.1 mouse_genomes_project 1 177067088 177070472 - MGP_WSBEiJ_P0022953 protein_coding protein_coding MGP_WSBEiJ_T0000666.1 MGP_WSBEiJ_G0000609.1 mouse_genomes_project 1 160006756 160010712 - TEC TEC MGP_WSBEiJ_T0000651.1 MGP_WSBEiJ_G0000594.1 mouse_genomes_project 1 155217386 155217733 - TEC TEC MGP_WSBEiJ_T0021349.1 MGP_WSBEiJ_G0015875.1 mouse_genomes_project 1 134028195 134047495 + MGP_WSBEiJ_P0021349 Elk4 protein_coding protein_coding MGP_WSBEiJ_T0021350.1 MGP_WSBEiJ_G0015875.1 mouse_genomes_project 1 134028465 134044710 + MGP_WSBEiJ_P0021350 Elk4 protein_coding protein_coding MGP_WSBEiJ_T0021351.1 MGP_WSBEiJ_G0015875.1 mouse_genomes_project 1 134028688 134035622 + Elk4 protein_coding processed_transcript MGP_WSBEiJ_T0021352.1 MGP_WSBEiJ_G0015875.1 mouse_genomes_project 1 134028698 134035480 + Elk4 protein_coding processed_transcript MGP_WSBEiJ_T0021353.1 MGP_WSBEiJ_G0015875.1 mouse_genomes_project 1 134028886 134039326 + MGP_WSBEiJ_P0021353 Elk4 protein_coding protein_coding MGP_WSBEiJ_T0021354.1 MGP_WSBEiJ_G0015875.1 mouse_genomes_project 1 134038828 134053665 + MGP_WSBEiJ_P0021354 Elk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021355.1 MGP_WSBEiJ_G0015875.1 mouse_genomes_project 1 134039463 134052747 + Elk4 protein_coding processed_transcript MGP_WSBEiJ_T0097185.1 MGP_WSBEiJ_G0035866.1 mouse_genomes_project 1 129108454 129108584 + Gm23370 scaRNA scaRNA MGP_WSBEiJ_T0011811.1 MGP_WSBEiJ_G0009941.1 mouse_genomes_project 1 52161785 52162358 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005735.1 MGP_WSBEiJ_G0004808.1 mouse_genomes_project 1 89148705 89150498 + Gm29336 lincRNA lincRNA MGP_WSBEiJ_T0009360.1 MGP_WSBEiJ_G0007517.1 mouse_genomes_project 1 82225049 82225153 + Mir6344 miRNA miRNA MGP_WSBEiJ_T0022199.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161587177 161915655 + MGP_WSBEiJ_P0022199 Astn1 protein_coding protein_coding MGP_WSBEiJ_T0022200.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161587208 161915657 + MGP_WSBEiJ_P0022200 Astn1 protein_coding protein_coding MGP_WSBEiJ_T0022201.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161587243 161839862 + MGP_WSBEiJ_P0022201 Astn1 protein_coding protein_coding MGP_WSBEiJ_T0022202.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161588267 161839357 + MGP_WSBEiJ_P0022202 Astn1 protein_coding protein_coding MGP_WSBEiJ_T0022203.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161588280 161903439 + MGP_WSBEiJ_P0022203 Astn1 protein_coding protein_coding MGP_WSBEiJ_T0022204.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161740259 161751810 + Astn1 protein_coding processed_transcript MGP_WSBEiJ_T0022205.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161786893 161826417 + MGP_WSBEiJ_P0022205 Astn1 protein_coding protein_coding MGP_WSBEiJ_T0022206.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161826165 161838527 + Astn1 protein_coding retained_intron MGP_WSBEiJ_T0022207.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161880318 161891530 + MGP_WSBEiJ_P0022207 Astn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022208.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161880466 161908182 + MGP_WSBEiJ_P0022208 Astn1 protein_coding protein_coding MGP_WSBEiJ_T0022209.1 MGP_WSBEiJ_G0016043.1 mouse_genomes_project 1 161902746 161912408 + Astn1 protein_coding processed_transcript MGP_WSBEiJ_T0022934.1 MGP_WSBEiJ_G0016199.1 mouse_genomes_project 1 176349200 176359506 - MGP_WSBEiJ_P0022934 Slamf8 protein_coding protein_coding MGP_WSBEiJ_T0022935.1 MGP_WSBEiJ_G0016199.1 mouse_genomes_project 1 176357916 176359387 - Slamf8 protein_coding retained_intron MGP_WSBEiJ_T0022845.1 MGP_WSBEiJ_G0016181.1 mouse_genomes_project 1 175796103 175801361 - MGP_WSBEiJ_P0022845 Nhlh1 protein_coding protein_coding MGP_WSBEiJ_T0005826.1 MGP_WSBEiJ_G0004885.1 mouse_genomes_project 1 138876683 138894711 + Gm37799 lincRNA lincRNA MGP_WSBEiJ_T0000621.1 MGP_WSBEiJ_G0000564.1 mouse_genomes_project 1 140343358 140346206 + TEC TEC MGP_WSBEiJ_T0011819.1 MGP_WSBEiJ_G0009949.1 mouse_genomes_project 1 54233917 54234313 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019253.1 MGP_WSBEiJ_G0015451.1 mouse_genomes_project 1 54297576 54671276 + MGP_WSBEiJ_P0019253 Plcl1 protein_coding protein_coding MGP_WSBEiJ_T0019254.1 MGP_WSBEiJ_G0015451.1 mouse_genomes_project 1 54613663 54650171 + Plcl1 protein_coding processed_transcript MGP_WSBEiJ_T0005963.1 MGP_WSBEiJ_G0004991.1 mouse_genomes_project 1 195767056 195768414 + Gm38161 lincRNA lincRNA MGP_WSBEiJ_T0005638.1 MGP_WSBEiJ_G0004733.1 mouse_genomes_project 1 49113974 49114502 - Gm29665 lincRNA lincRNA MGP_WSBEiJ_T0005575.1 MGP_WSBEiJ_G0004688.1 mouse_genomes_project 1 16583522 16584583 + Gm28340 lincRNA lincRNA MGP_WSBEiJ_T0002719.1 MGP_WSBEiJ_G0002591.1 mouse_genomes_project 1 36495094 36499109 + Gm16151 antisense antisense MGP_WSBEiJ_T0000534.1 MGP_WSBEiJ_G0000479.1 mouse_genomes_project 1 91499094 91500955 - TEC TEC MGP_WSBEiJ_T0020764.1 MGP_WSBEiJ_G0015744.1 mouse_genomes_project 1 93898294 93907907 - MGP_WSBEiJ_P0020764 2310007B03Rik protein_coding protein_coding MGP_WSBEiJ_T0020765.1 MGP_WSBEiJ_G0015744.1 mouse_genomes_project 1 93898528 93907829 - MGP_WSBEiJ_P0020765 2310007B03Rik protein_coding protein_coding MGP_WSBEiJ_T0011692.1 MGP_WSBEiJ_G0009822.1 mouse_genomes_project 1 14019570 14028851 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021939.1 MGP_WSBEiJ_G0015994.1 mouse_genomes_project 1 154770554 155009925 - MGP_WSBEiJ_P0021939 1700025G04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021940.1 MGP_WSBEiJ_G0015994.1 mouse_genomes_project 1 154799025 155010080 - MGP_WSBEiJ_P0021940 1700025G04Rik protein_coding protein_coding MGP_WSBEiJ_T0021941.1 MGP_WSBEiJ_G0015994.1 mouse_genomes_project 1 154807341 154835276 - 1700025G04Rik protein_coding retained_intron MGP_WSBEiJ_T0021942.1 MGP_WSBEiJ_G0015994.1 mouse_genomes_project 1 154807678 154975128 - MGP_WSBEiJ_P0021942 1700025G04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019576.1 MGP_WSBEiJ_G0015507.1 mouse_genomes_project 1 63059585 63084366 + MGP_WSBEiJ_P0019576 Fastkd2 protein_coding protein_coding MGP_WSBEiJ_T0019577.1 MGP_WSBEiJ_G0015507.1 mouse_genomes_project 1 63059612 63067752 + Fastkd2 protein_coding retained_intron MGP_WSBEiJ_T0019578.1 MGP_WSBEiJ_G0015507.1 mouse_genomes_project 1 63059614 63082249 + Fastkd2 protein_coding retained_intron MGP_WSBEiJ_T0019579.1 MGP_WSBEiJ_G0015507.1 mouse_genomes_project 1 63067618 63077768 + Fastkd2 protein_coding processed_transcript MGP_WSBEiJ_T0019580.1 MGP_WSBEiJ_G0015507.1 mouse_genomes_project 1 63077731 63079987 + Fastkd2 protein_coding retained_intron MGP_WSBEiJ_T0019581.1 MGP_WSBEiJ_G0015507.1 mouse_genomes_project 1 63080931 63082176 + Fastkd2 protein_coding processed_transcript MGP_WSBEiJ_T0022787.1 MGP_WSBEiJ_G0016166.1 mouse_genomes_project 1 175028019 175047372 + MGP_WSBEiJ_P0022787 Nectin4 protein_coding protein_coding MGP_WSBEiJ_T0022788.1 MGP_WSBEiJ_G0016166.1 mouse_genomes_project 1 175028272 175047683 + MGP_WSBEiJ_P0022788 Nectin4 protein_coding protein_coding MGP_WSBEiJ_T0022789.1 MGP_WSBEiJ_G0016166.1 mouse_genomes_project 1 175028275 175047370 + MGP_WSBEiJ_P0022789 Nectin4 protein_coding protein_coding MGP_WSBEiJ_T0020940.1 MGP_WSBEiJ_G0015781.1 mouse_genomes_project 1 107132861 107176533 + MGP_WSBEiJ_P0020940 Zcchc2 protein_coding protein_coding MGP_WSBEiJ_T0020941.1 MGP_WSBEiJ_G0015781.1 mouse_genomes_project 1 107133144 107176526 + MGP_WSBEiJ_P0020941 Zcchc2 protein_coding protein_coding MGP_WSBEiJ_T0020942.1 MGP_WSBEiJ_G0015781.1 mouse_genomes_project 1 107146577 107174907 + MGP_WSBEiJ_P0020942 Zcchc2 protein_coding protein_coding MGP_WSBEiJ_T0020943.1 MGP_WSBEiJ_G0015781.1 mouse_genomes_project 1 107146592 107169960 + MGP_WSBEiJ_P0020943 Zcchc2 protein_coding protein_coding MGP_WSBEiJ_T0020944.1 MGP_WSBEiJ_G0015781.1 mouse_genomes_project 1 107154199 107165716 + MGP_WSBEiJ_P0020944 Zcchc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021368.1 MGP_WSBEiJ_G0015877.1 mouse_genomes_project 1 134135161 134163234 - MGP_WSBEiJ_P0021368 Cdk18 protein_coding protein_coding MGP_WSBEiJ_T0021369.1 MGP_WSBEiJ_G0015877.1 mouse_genomes_project 1 134137498 134139826 - Cdk18 protein_coding retained_intron MGP_WSBEiJ_T0021370.1 MGP_WSBEiJ_G0015877.1 mouse_genomes_project 1 134137676 134163155 - MGP_WSBEiJ_P0021370 Cdk18 protein_coding protein_coding MGP_WSBEiJ_T0021371.1 MGP_WSBEiJ_G0015877.1 mouse_genomes_project 1 134137743 134139603 - MGP_WSBEiJ_P0021371 Cdk18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021372.1 MGP_WSBEiJ_G0015877.1 mouse_genomes_project 1 134137846 134139168 - Cdk18 protein_coding retained_intron MGP_WSBEiJ_T0000418.1 MGP_WSBEiJ_G0000363.1 mouse_genomes_project 1 34972910 34973053 - TEC TEC MGP_WSBEiJ_T0009317.1 MGP_WSBEiJ_G0007474.1 mouse_genomes_project 1 5682303 5682413 - Gm23358 miRNA miRNA MGP_WSBEiJ_T0011714.1 MGP_WSBEiJ_G0009844.1 mouse_genomes_project 1 20929216 20931636 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019298.1 MGP_WSBEiJ_G0015459.1 mouse_genomes_project 1 56980275 57010190 + MGP_WSBEiJ_P0019298 Sgol2a protein_coding protein_coding MGP_WSBEiJ_T0019299.1 MGP_WSBEiJ_G0015459.1 mouse_genomes_project 1 57007006 57010189 + Sgol2a protein_coding retained_intron MGP_WSBEiJ_T0098798.1 MGP_WSBEiJ_G0037461.1 mouse_genomes_project 1 147921357 147921484 - Gm25460 snoRNA snoRNA MGP_WSBEiJ_T0098780.1 MGP_WSBEiJ_G0037443.1 mouse_genomes_project 1 104249728 104249883 - Gm23965 snoRNA snoRNA MGP_WSBEiJ_T0011919.1 MGP_WSBEiJ_G0010049.1 mouse_genomes_project 1 99179309 99180293 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005929.1 MGP_WSBEiJ_G0004965.1 mouse_genomes_project 1 187726112 187726495 + Gm37986 lincRNA lincRNA MGP_WSBEiJ_T0012013.1 MGP_WSBEiJ_G0010143.1 mouse_genomes_project 1 140607062 140607546 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021060.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 120988968 121092854 - MGP_WSBEiJ_P0021060 Epb41l5 protein_coding protein_coding MGP_WSBEiJ_T0021061.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 120992102 121092852 - MGP_WSBEiJ_P0021061 Epb41l5 protein_coding protein_coding MGP_WSBEiJ_T0021062.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 120998198 121043608 - Epb41l5 protein_coding retained_intron MGP_WSBEiJ_T0021063.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 121021445 121023733 - Epb41l5 protein_coding retained_intron MGP_WSBEiJ_T0021064.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 121034047 121092918 - MGP_WSBEiJ_P0021064 Epb41l5 protein_coding protein_coding MGP_WSBEiJ_T0021065.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 121038378 121092535 - MGP_WSBEiJ_P0021065 Epb41l5 protein_coding protein_coding MGP_WSBEiJ_T0021066.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 121038746 121042543 - Epb41l5 protein_coding retained_intron MGP_WSBEiJ_T0021067.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 121060912 121077249 - Epb41l5 protein_coding retained_intron MGP_WSBEiJ_T0021068.1 MGP_WSBEiJ_G0015809.1 mouse_genomes_project 1 121065206 121092542 - MGP_WSBEiJ_P0021068 Epb41l5 protein_coding protein_coding MGP_WSBEiJ_T0023615.1 MGP_WSBEiJ_G0016365.1 mouse_genomes_project 1 197852478 197862267 + MGP_WSBEiJ_P0023615 A130010J15Rik protein_coding protein_coding MGP_WSBEiJ_T0023617.1 MGP_WSBEiJ_G0016365.1 mouse_genomes_project 1 197857901 197860732 + MGP_WSBEiJ_P0023617 A130010J15Rik protein_coding protein_coding MGP_WSBEiJ_T0023618.1 MGP_WSBEiJ_G0016365.1 mouse_genomes_project 1 197857925 197859265 + MGP_WSBEiJ_P0023618 A130010J15Rik protein_coding protein_coding MGP_WSBEiJ_T0023619.1 MGP_WSBEiJ_G0016365.1 mouse_genomes_project 1 197858010 197862267 + MGP_WSBEiJ_P0023619 A130010J15Rik protein_coding protein_coding MGP_WSBEiJ_T0023620.1 MGP_WSBEiJ_G0016365.1 mouse_genomes_project 1 197858013 197860734 + MGP_WSBEiJ_P0023620 A130010J15Rik protein_coding protein_coding MGP_WSBEiJ_T0023621.1 MGP_WSBEiJ_G0016365.1 mouse_genomes_project 1 197858013 197858860 + MGP_WSBEiJ_P0023621 A130010J15Rik protein_coding protein_coding MGP_WSBEiJ_T0023622.1 MGP_WSBEiJ_G0016365.1 mouse_genomes_project 1 197858019 197858986 + MGP_WSBEiJ_P0023622 A130010J15Rik protein_coding protein_coding MGP_WSBEiJ_T0023623.1 MGP_WSBEiJ_G0016365.1 mouse_genomes_project 1 197858177 197859029 + MGP_WSBEiJ_P0023623 A130010J15Rik protein_coding protein_coding MGP_WSBEiJ_T0000540.1 MGP_WSBEiJ_G0000485.1 mouse_genomes_project 1 96158555 96161093 + TEC TEC MGP_WSBEiJ_T0021803.1 MGP_WSBEiJ_G0015970.1 mouse_genomes_project 1 146166894 146281283 - MGP_WSBEiJ_P0021803 Cdc73 protein_coding protein_coding MGP_WSBEiJ_T0021804.1 MGP_WSBEiJ_G0015970.1 mouse_genomes_project 1 146174248 146214663 - Cdc73 protein_coding processed_transcript MGP_WSBEiJ_T0021805.1 MGP_WSBEiJ_G0015970.1 mouse_genomes_project 1 146207183 146210661 - Cdc73 protein_coding retained_intron MGP_WSBEiJ_T0021806.1 MGP_WSBEiJ_G0015970.1 mouse_genomes_project 1 146213552 146216442 - Cdc73 protein_coding retained_intron MGP_WSBEiJ_T0021808.1 MGP_WSBEiJ_G0015970.1 mouse_genomes_project 1 146264901 146280591 - MGP_WSBEiJ_P0021808 Cdc73 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018807.1 MGP_WSBEiJ_G0015361.1 mouse_genomes_project 1 36157516 36169641 - MGP_WSBEiJ_P0018807 Txndc9 protein_coding protein_coding MGP_WSBEiJ_T0018808.1 MGP_WSBEiJ_G0015361.1 mouse_genomes_project 1 36159721 36170219 - MGP_WSBEiJ_P0018808 Txndc9 protein_coding protein_coding MGP_WSBEiJ_T0018809.1 MGP_WSBEiJ_G0015361.1 mouse_genomes_project 1 36159721 36169569 - MGP_WSBEiJ_P0018809 Txndc9 protein_coding protein_coding MGP_WSBEiJ_T0018810.1 MGP_WSBEiJ_G0015361.1 mouse_genomes_project 1 36159723 36169550 - Txndc9 protein_coding retained_intron MGP_WSBEiJ_T0018811.1 MGP_WSBEiJ_G0015361.1 mouse_genomes_project 1 36159967 36168171 - MGP_WSBEiJ_P0018811 Txndc9 protein_coding protein_coding MGP_WSBEiJ_T0018812.1 MGP_WSBEiJ_G0015361.1 mouse_genomes_project 1 36159970 36169942 - MGP_WSBEiJ_P0018812 Txndc9 protein_coding protein_coding MGP_WSBEiJ_T0018813.1 MGP_WSBEiJ_G0015361.1 mouse_genomes_project 1 36162585 36168984 - MGP_WSBEiJ_P0018813 Txndc9 protein_coding protein_coding MGP_WSBEiJ_T0018814.1 MGP_WSBEiJ_G0015361.1 mouse_genomes_project 1 36168240 36169588 - Txndc9 protein_coding retained_intron MGP_WSBEiJ_T0021184.1 MGP_WSBEiJ_G0015835.1 mouse_genomes_project 1 129607965 129636578 - MGP_WSBEiJ_P0021184 Map3k19 protein_coding protein_coding MGP_WSBEiJ_T0021185.1 MGP_WSBEiJ_G0015835.1 mouse_genomes_project 1 129607974 129636578 - MGP_WSBEiJ_P0021185 Map3k19 protein_coding protein_coding MGP_WSBEiJ_T0021186.1 MGP_WSBEiJ_G0015835.1 mouse_genomes_project 1 129607974 129636578 - MGP_WSBEiJ_P0021186 Map3k19 protein_coding protein_coding MGP_WSBEiJ_T0021187.1 MGP_WSBEiJ_G0015835.1 mouse_genomes_project 1 129607983 129652524 - MGP_WSBEiJ_P0021187 Map3k19 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021188.1 MGP_WSBEiJ_G0015835.1 mouse_genomes_project 1 129607983 129636578 - MGP_WSBEiJ_P0021188 Map3k19 protein_coding protein_coding MGP_WSBEiJ_T0021224.1 MGP_WSBEiJ_G0015841.1 mouse_genomes_project 1 130152354 130182301 - MGP_WSBEiJ_P0021224 Mcm6 protein_coding protein_coding MGP_WSBEiJ_T0021225.1 MGP_WSBEiJ_G0015841.1 mouse_genomes_project 1 130152357 130182284 - MGP_WSBEiJ_P0021225 Mcm6 protein_coding protein_coding MGP_WSBEiJ_T0021226.1 MGP_WSBEiJ_G0015841.1 mouse_genomes_project 1 130160116 130167543 - Mcm6 protein_coding retained_intron MGP_WSBEiJ_T0021227.1 MGP_WSBEiJ_G0015841.1 mouse_genomes_project 1 130162514 130165121 - Mcm6 protein_coding retained_intron MGP_WSBEiJ_T0097544.1 MGP_WSBEiJ_G0036207.1 mouse_genomes_project 1 65854830 65854981 + Gm25411 snRNA snRNA MGP_WSBEiJ_T0098730.1 MGP_WSBEiJ_G0037393.1 mouse_genomes_project 1 10955438 10955569 - Gm26273 snoRNA snoRNA MGP_WSBEiJ_T0011830.1 MGP_WSBEiJ_G0009960.1 mouse_genomes_project 1 58804373 58804758 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000473.1 MGP_WSBEiJ_G0000418.1 mouse_genomes_project 1 66191912 66196565 + TEC TEC MGP_WSBEiJ_T0000551.1 MGP_WSBEiJ_G0000496.1 mouse_genomes_project 1 107023540 107027683 - TEC TEC MGP_WSBEiJ_T0000479.1 MGP_WSBEiJ_G0000424.1 mouse_genomes_project 1 68117387 68119451 - TEC TEC MGP_WSBEiJ_T0000619.1 MGP_WSBEiJ_G0000563.1 mouse_genomes_project 1 140335427 140338450 + TEC TEC MGP_WSBEiJ_T0000620.1 MGP_WSBEiJ_G0000563.1 mouse_genomes_project 1 140336346 140338450 + TEC TEC MGP_WSBEiJ_T0000721.1 MGP_WSBEiJ_G0000664.1 mouse_genomes_project 1 180963040 180965147 + TEC TEC MGP_WSBEiJ_T0100414.1 MGP_WSBEiJ_G0038873.1 mouse_genomes_project 1 105707353 105708713 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0022749.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174938354 174944399 - MGP_WSBEiJ_P0022749 Usp21 protein_coding protein_coding MGP_WSBEiJ_T0022750.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174938358 174944332 - MGP_WSBEiJ_P0022750 Usp21 protein_coding protein_coding MGP_WSBEiJ_T0022751.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174938367 174939326 - Usp21 protein_coding retained_intron MGP_WSBEiJ_T0022752.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174938367 174944363 - MGP_WSBEiJ_P0022752 Usp21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022753.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174938367 174944369 - MGP_WSBEiJ_P0022753 Usp21 protein_coding protein_coding MGP_WSBEiJ_T0022754.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174938711 174939586 - Usp21 protein_coding retained_intron MGP_WSBEiJ_T0022755.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174939218 174940995 - Usp21 protein_coding retained_intron MGP_WSBEiJ_T0022756.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174939450 174940404 - Usp21 protein_coding retained_intron MGP_WSBEiJ_T0022757.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174939824 174942022 - Usp21 protein_coding retained_intron MGP_WSBEiJ_T0022758.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174939938 174943358 - Usp21 protein_coding retained_intron MGP_WSBEiJ_T0022759.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174940870 174944367 - Usp21 protein_coding retained_intron MGP_WSBEiJ_T0022760.1 MGP_WSBEiJ_G0016160.1 mouse_genomes_project 1 174941339 174943214 - MGP_WSBEiJ_P0022760 Usp21 protein_coding protein_coding MGP_WSBEiJ_T0023586.1 MGP_WSBEiJ_G0016359.1 mouse_genomes_project 1 196844743 197183396 + MGP_WSBEiJ_P0023586 Kcnh1 protein_coding protein_coding MGP_WSBEiJ_T0023587.1 MGP_WSBEiJ_G0016359.1 mouse_genomes_project 1 196844743 197183396 + MGP_WSBEiJ_P0023587 Kcnh1 protein_coding protein_coding MGP_WSBEiJ_T0023588.1 MGP_WSBEiJ_G0016359.1 mouse_genomes_project 1 197110330 197183396 + MGP_WSBEiJ_P0023588 Kcnh1 protein_coding protein_coding MGP_WSBEiJ_T0011719.1 MGP_WSBEiJ_G0009849.1 mouse_genomes_project 1 23141714 23142284 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022037.1 MGP_WSBEiJ_G0016016.1 mouse_genomes_project 1 157444538 157794533 - MGP_WSBEiJ_P0022037 Cacna1e protein_coding protein_coding MGP_WSBEiJ_T0022038.1 MGP_WSBEiJ_G0016016.1 mouse_genomes_project 1 157446338 157794104 - MGP_WSBEiJ_P0022038 Cacna1e protein_coding protein_coding MGP_WSBEiJ_T0022039.1 MGP_WSBEiJ_G0016016.1 mouse_genomes_project 1 157452210 157794103 - MGP_WSBEiJ_P0022039 Cacna1e protein_coding unknown_likely_coding MGP_WSBEiJ_T0022040.1 MGP_WSBEiJ_G0016016.1 mouse_genomes_project 1 157521234 157528837 - Cacna1e protein_coding retained_intron MGP_WSBEiJ_T0022041.1 MGP_WSBEiJ_G0016016.1 mouse_genomes_project 1 157533213 157890409 - Cacna1e protein_coding retained_intron MGP_WSBEiJ_T0022042.1 MGP_WSBEiJ_G0016016.1 mouse_genomes_project 1 157767274 157962596 - Cacna1e protein_coding retained_intron MGP_WSBEiJ_T0022043.1 MGP_WSBEiJ_G0016016.1 mouse_genomes_project 1 157960257 157962119 - Cacna1e protein_coding retained_intron MGP_WSBEiJ_T0019583.1 MGP_WSBEiJ_G0015509.1 mouse_genomes_project 1 63359184 63454454 - MGP_WSBEiJ_P0019583 Klf7 protein_coding protein_coding MGP_WSBEiJ_T0019584.1 MGP_WSBEiJ_G0015509.1 mouse_genomes_project 1 63372923 63454445 - MGP_WSBEiJ_P0019584 Klf7 protein_coding protein_coding MGP_WSBEiJ_T0019585.1 MGP_WSBEiJ_G0015509.1 mouse_genomes_project 1 63411366 63455214 - MGP_WSBEiJ_P0019585 Klf7 protein_coding protein_coding MGP_WSBEiJ_T0005791.1 MGP_WSBEiJ_G0004855.1 mouse_genomes_project 1 121359566 121364772 + Gm28209 lincRNA lincRNA MGP_WSBEiJ_T0019509.1 MGP_WSBEiJ_G0015495.1 mouse_genomes_project 1 60083891 60111236 + Ctla4 protein_coding processed_transcript MGP_WSBEiJ_T0019510.1 MGP_WSBEiJ_G0015495.1 mouse_genomes_project 1 60107544 60114344 + MGP_WSBEiJ_P0019510 Ctla4 protein_coding protein_coding MGP_WSBEiJ_T0019511.1 MGP_WSBEiJ_G0015495.1 mouse_genomes_project 1 60107690 60113281 + MGP_WSBEiJ_P0019511 Ctla4 protein_coding protein_coding MGP_WSBEiJ_T0020546.1 MGP_WSBEiJ_G0015692.1 mouse_genomes_project 1 88644928 88656411 + protein_coding processed_transcript MGP_WSBEiJ_T0000359.1 MGP_WSBEiJ_G0000307.1 mouse_genomes_project 1 11290910 11294515 - TEC TEC MGP_WSBEiJ_T0020788.1 MGP_WSBEiJ_G0015750.1 mouse_genomes_project 1 94131989 94162753 + MGP_WSBEiJ_P0020788 protein_coding protein_coding MGP_WSBEiJ_T0020789.1 MGP_WSBEiJ_G0015750.1 mouse_genomes_project 1 94131989 94163655 + MGP_WSBEiJ_P0020789 protein_coding protein_coding MGP_WSBEiJ_T0020790.1 MGP_WSBEiJ_G0015750.1 mouse_genomes_project 1 94161211 94162921 + MGP_WSBEiJ_P0020790 protein_coding protein_coding MGP_WSBEiJ_T0022984.1 MGP_WSBEiJ_G0016227.1 mouse_genomes_project 1 178006365 178011980 + MGP_WSBEiJ_P0022984 Olfr429 protein_coding protein_coding MGP_WSBEiJ_T0022985.1 MGP_WSBEiJ_G0016227.1 mouse_genomes_project 1 178011037 178011980 + MGP_WSBEiJ_P0022985 Olfr429 protein_coding protein_coding MGP_WSBEiJ_T0000491.1 MGP_WSBEiJ_G0000436.1 mouse_genomes_project 1 74845631 74847197 + TEC TEC MGP_WSBEiJ_T0002816.1 MGP_WSBEiJ_G0002663.1 mouse_genomes_project 1 133271346 133274756 + Gm28913 antisense antisense MGP_WSBEiJ_T0000485.1 MGP_WSBEiJ_G0000430.1 mouse_genomes_project 1 70223661 70229541 - TEC TEC MGP_WSBEiJ_T0000324.1 MGP_WSBEiJ_G0000272.1 mouse_genomes_project 1 492529 494838 - TEC TEC MGP_WSBEiJ_T0098804.1 MGP_WSBEiJ_G0037467.1 mouse_genomes_project 1 164227637 164227758 - Gm24988 snoRNA snoRNA MGP_WSBEiJ_T0005871.1 MGP_WSBEiJ_G0004919.1 mouse_genomes_project 1 163380110 163383361 - 4930562F07Rik lincRNA lincRNA MGP_WSBEiJ_T0005872.1 MGP_WSBEiJ_G0004919.1 mouse_genomes_project 1 163380110 163383294 - 4930562F07Rik lincRNA lincRNA MGP_WSBEiJ_T0005873.1 MGP_WSBEiJ_G0004919.1 mouse_genomes_project 1 163380345 163383318 - 4930562F07Rik lincRNA lincRNA MGP_WSBEiJ_T0011927.1 MGP_WSBEiJ_G0010057.1 mouse_genomes_project 1 102377284 102377733 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097517.1 MGP_WSBEiJ_G0036180.1 mouse_genomes_project 1 1763404 1763507 - Gm25493 snRNA snRNA MGP_WSBEiJ_T0000349.1 MGP_WSBEiJ_G0000297.1 mouse_genomes_project 1 8837898 8840042 + TEC TEC MGP_WSBEiJ_T0005787.1 MGP_WSBEiJ_G0004853.1 mouse_genomes_project 1 120762973 120772974 + Gm29455 lincRNA lincRNA MGP_WSBEiJ_T0005788.1 MGP_WSBEiJ_G0004853.1 mouse_genomes_project 1 120763015 120820682 + Gm29455 lincRNA lincRNA MGP_WSBEiJ_T0011648.1 MGP_WSBEiJ_G0009778.1 mouse_genomes_project 1 1726882 1728333 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011744.1 MGP_WSBEiJ_G0009874.1 mouse_genomes_project 1 32528479 32528954 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012117.1 MGP_WSBEiJ_G0010247.1 mouse_genomes_project 1 186444973 186445757 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020503.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88101606 88119156 + MGP_WSBEiJ_P0020503 Atg16l1 protein_coding protein_coding MGP_WSBEiJ_T0020504.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88101749 88139879 + MGP_WSBEiJ_P0020504 Atg16l1 protein_coding protein_coding MGP_WSBEiJ_T0020505.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88101792 88115922 + Atg16l1 protein_coding retained_intron MGP_WSBEiJ_T0020506.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88101812 88133650 + Atg16l1 protein_coding retained_intron MGP_WSBEiJ_T0020507.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88101812 88139873 + MGP_WSBEiJ_P0020507 Atg16l1 protein_coding protein_coding MGP_WSBEiJ_T0020508.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88101822 88139876 + MGP_WSBEiJ_P0020508 Atg16l1 protein_coding protein_coding MGP_WSBEiJ_T0020509.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88101824 88139876 + Atg16l1 protein_coding retained_intron MGP_WSBEiJ_T0020510.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88101829 88114546 + Atg16l1 protein_coding retained_intron MGP_WSBEiJ_T0020511.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88113463 88122614 + Atg16l1 protein_coding retained_intron MGP_WSBEiJ_T0020512.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88123036 88126436 + Atg16l1 protein_coding retained_intron MGP_WSBEiJ_T0020513.1 MGP_WSBEiJ_G0015684.1 mouse_genomes_project 1 88125935 88136013 + Atg16l1 protein_coding retained_intron MGP_WSBEiJ_T0022995.1 MGP_WSBEiJ_G0016236.1 mouse_genomes_project 1 178357589 178364959 + MGP_WSBEiJ_P0022995 Olfr414 protein_coding protein_coding MGP_WSBEiJ_T0022996.1 MGP_WSBEiJ_G0016236.1 mouse_genomes_project 1 178363832 178364787 + MGP_WSBEiJ_P0022996 Olfr414 protein_coding protein_coding MGP_WSBEiJ_T0005969.1 MGP_WSBEiJ_G0004996.1 mouse_genomes_project 1 197522109 197523171 + 1700065J18Rik lincRNA lincRNA MGP_WSBEiJ_T0005970.1 MGP_WSBEiJ_G0004996.1 mouse_genomes_project 1 197522119 197523177 + 1700065J18Rik lincRNA lincRNA MGP_WSBEiJ_T0098788.1 MGP_WSBEiJ_G0037451.1 mouse_genomes_project 1 124983531 124983662 - Gm24791 snoRNA snoRNA MGP_WSBEiJ_T0018610.1 MGP_WSBEiJ_G0015327.1 mouse_genomes_project 1 32581588 32593991 + MGP_WSBEiJ_P0018610 Amer3 protein_coding protein_coding MGP_WSBEiJ_T0098778.1 MGP_WSBEiJ_G0037441.1 mouse_genomes_project 1 103442142 103442241 - Gm23036 snoRNA snoRNA MGP_WSBEiJ_T0022264.1 MGP_WSBEiJ_G0016052.1 mouse_genomes_project 1 164258386 164332482 + MGP_WSBEiJ_P0022264 Rc3h1 protein_coding protein_coding MGP_WSBEiJ_T0022265.1 MGP_WSBEiJ_G0016052.1 mouse_genomes_project 1 164283764 164324558 + MGP_WSBEiJ_P0022265 Rc3h1 protein_coding protein_coding MGP_WSBEiJ_T0022266.1 MGP_WSBEiJ_G0016052.1 mouse_genomes_project 1 164305354 164306818 + Rc3h1 protein_coding retained_intron MGP_WSBEiJ_T0011663.1 MGP_WSBEiJ_G0009793.1 mouse_genomes_project 1 4185199 4185587 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005944.1 MGP_WSBEiJ_G0004974.1 mouse_genomes_project 1 189053090 189056550 + Gm34342 lincRNA lincRNA MGP_WSBEiJ_T0000508.1 MGP_WSBEiJ_G0000453.1 mouse_genomes_project 1 82924964 82926010 - TEC TEC MGP_WSBEiJ_T0005860.1 MGP_WSBEiJ_G0004911.1 mouse_genomes_project 1 157307849 157323406 + 4930532M18Rik lincRNA lincRNA MGP_WSBEiJ_T0005861.1 MGP_WSBEiJ_G0004911.1 mouse_genomes_project 1 157309130 157323227 + 4930532M18Rik lincRNA lincRNA MGP_WSBEiJ_T0002819.1 MGP_WSBEiJ_G0002666.1 mouse_genomes_project 1 134789420 134792892 + Gm10538 antisense antisense MGP_WSBEiJ_T0000334.1 MGP_WSBEiJ_G0000282.1 mouse_genomes_project 1 2861388 2863189 - TEC TEC MGP_WSBEiJ_T0012082.1 MGP_WSBEiJ_G0010212.1 mouse_genomes_project 1 169231891 169232954 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009368.1 MGP_WSBEiJ_G0007525.1 mouse_genomes_project 1 88374402 88374512 + Gm25198 miRNA miRNA MGP_WSBEiJ_T0098741.1 MGP_WSBEiJ_G0037404.1 mouse_genomes_project 1 24119321 24119427 + Gm24064 snoRNA snoRNA MGP_WSBEiJ_T0005757.1 MGP_WSBEiJ_G0004829.1 mouse_genomes_project 1 93870068 93871233 - Gm28086 lincRNA lincRNA MGP_WSBEiJ_T0018444.1 MGP_WSBEiJ_G0015294.1 mouse_genomes_project 1 18816393 19428587 - MGP_WSBEiJ_P0018444 Kcnq5 protein_coding protein_coding MGP_WSBEiJ_T0018445.1 MGP_WSBEiJ_G0015294.1 mouse_genomes_project 1 18816398 19428948 - MGP_WSBEiJ_P0018445 Kcnq5 protein_coding protein_coding MGP_WSBEiJ_T0018446.1 MGP_WSBEiJ_G0015294.1 mouse_genomes_project 1 18820145 19428587 - MGP_WSBEiJ_P0018446 Kcnq5 protein_coding protein_coding MGP_WSBEiJ_T0018447.1 MGP_WSBEiJ_G0015294.1 mouse_genomes_project 1 18820145 19428587 - MGP_WSBEiJ_P0018447 Kcnq5 protein_coding protein_coding MGP_WSBEiJ_T0018448.1 MGP_WSBEiJ_G0015294.1 mouse_genomes_project 1 18820145 19428587 - MGP_WSBEiJ_P0018448 Kcnq5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018449.1 MGP_WSBEiJ_G0015294.1 mouse_genomes_project 1 18894918 19428671 - Kcnq5 protein_coding retained_intron MGP_WSBEiJ_T0018450.1 MGP_WSBEiJ_G0015294.1 mouse_genomes_project 1 19015380 19315467 - Kcnq5 protein_coding processed_transcript MGP_WSBEiJ_T0100391.1 MGP_WSBEiJ_G0038850.1 mouse_genomes_project 1 58091458 58103705 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005940.1 MGP_WSBEiJ_G0004971.1 mouse_genomes_project 1 188836280 188870629 - 1700112H15Rik lincRNA lincRNA MGP_WSBEiJ_T0000463.1 MGP_WSBEiJ_G0000408.1 mouse_genomes_project 1 60901424 60905122 + TEC TEC MGP_WSBEiJ_T0000650.1 MGP_WSBEiJ_G0000593.1 mouse_genomes_project 1 154395348 154398364 - TEC TEC MGP_WSBEiJ_T0000402.1 MGP_WSBEiJ_G0000348.1 mouse_genomes_project 1 30444493 30447900 + TEC TEC MGP_WSBEiJ_T0023211.1 MGP_WSBEiJ_G0016280.1 mouse_genomes_project 1 184999544 185011929 - MGP_WSBEiJ_P0023211 H3f3a protein_coding protein_coding MGP_WSBEiJ_T0023212.1 MGP_WSBEiJ_G0016280.1 mouse_genomes_project 1 185001399 185011831 - MGP_WSBEiJ_P0023212 H3f3a protein_coding protein_coding MGP_WSBEiJ_T0023213.1 MGP_WSBEiJ_G0016280.1 mouse_genomes_project 1 185001399 185012240 - MGP_WSBEiJ_P0023213 H3f3a protein_coding protein_coding MGP_WSBEiJ_T0023214.1 MGP_WSBEiJ_G0016280.1 mouse_genomes_project 1 185008076 185011900 - H3f3a protein_coding retained_intron MGP_WSBEiJ_T0023215.1 MGP_WSBEiJ_G0016280.1 mouse_genomes_project 1 185008486 185011900 - MGP_WSBEiJ_P0023215 H3f3a protein_coding protein_coding MGP_WSBEiJ_T0023216.1 MGP_WSBEiJ_G0016280.1 mouse_genomes_project 1 185008494 185011900 - MGP_WSBEiJ_P0023216 H3f3a protein_coding protein_coding MGP_WSBEiJ_T0019044.1 MGP_WSBEiJ_G0015410.1 mouse_genomes_project 1 44410222 44428983 - MGP_WSBEiJ_P0019044 Slc40a1 protein_coding protein_coding MGP_WSBEiJ_T0019045.1 MGP_WSBEiJ_G0015410.1 mouse_genomes_project 1 44417401 44429010 - Slc40a1 protein_coding retained_intron MGP_WSBEiJ_T0019046.1 MGP_WSBEiJ_G0015410.1 mouse_genomes_project 1 44421139 44426705 - Slc40a1 protein_coding processed_transcript MGP_WSBEiJ_T0019047.1 MGP_WSBEiJ_G0015410.1 mouse_genomes_project 1 44421147 44428657 - Slc40a1 protein_coding processed_transcript MGP_WSBEiJ_T0019048.1 MGP_WSBEiJ_G0015410.1 mouse_genomes_project 1 44423436 44429918 - MGP_WSBEiJ_P0019048 Slc40a1 protein_coding protein_coding MGP_WSBEiJ_T0019049.1 MGP_WSBEiJ_G0015410.1 mouse_genomes_project 1 44423436 44429918 - MGP_WSBEiJ_P0019049 Slc40a1 protein_coding protein_coding MGP_WSBEiJ_T0019050.1 MGP_WSBEiJ_G0015410.1 mouse_genomes_project 1 44423436 44429918 - MGP_WSBEiJ_P0019050 Slc40a1 protein_coding protein_coding MGP_WSBEiJ_T0019051.1 MGP_WSBEiJ_G0015410.1 mouse_genomes_project 1 44427126 44429922 - Slc40a1 protein_coding retained_intron MGP_WSBEiJ_T0012114.1 MGP_WSBEiJ_G0010244.1 mouse_genomes_project 1 185526735 185530327 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002767.1 MGP_WSBEiJ_G0002624.1 mouse_genomes_project 1 74121243 74121949 + Gm28364 antisense antisense MGP_WSBEiJ_T0020766.1 MGP_WSBEiJ_G0015745.1 mouse_genomes_project 1 93915687 93979269 + MGP_WSBEiJ_P0020766 Crocc2 protein_coding protein_coding MGP_WSBEiJ_T0020767.1 MGP_WSBEiJ_G0015745.1 mouse_genomes_project 1 93915687 93977040 + MGP_WSBEiJ_P0020767 Crocc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096884.1 MGP_WSBEiJ_G0035565.1 mouse_genomes_project 1 120042470 120042587 - Gm22094 rRNA rRNA MGP_WSBEiJ_T0020868.1 MGP_WSBEiJ_G0015767.1 mouse_genomes_project 1 96425059 96509410 - MGP_WSBEiJ_P0020868 St8sia4 protein_coding protein_coding MGP_WSBEiJ_T0020869.1 MGP_WSBEiJ_G0015767.1 mouse_genomes_project 1 96460694 96509374 - MGP_WSBEiJ_P0020869 St8sia4 protein_coding protein_coding MGP_WSBEiJ_T0020870.1 MGP_WSBEiJ_G0015767.1 mouse_genomes_project 1 96499881 96509407 - St8sia4 protein_coding retained_intron MGP_WSBEiJ_T0020871.1 MGP_WSBEiJ_G0015767.1 mouse_genomes_project 1 96505518 96509404 - St8sia4 protein_coding retained_intron MGP_WSBEiJ_T0005880.1 MGP_WSBEiJ_G0004926.1 mouse_genomes_project 1 167959023 167970669 + Gm26685 lincRNA lincRNA MGP_WSBEiJ_T0000605.1 MGP_WSBEiJ_G0000549.1 mouse_genomes_project 1 135977816 135979502 + TEC TEC MGP_WSBEiJ_T0005856.1 MGP_WSBEiJ_G0004908.1 mouse_genomes_project 1 157080052 157086988 - Gm28286 lincRNA lincRNA MGP_WSBEiJ_T0018707.1 MGP_WSBEiJ_G0015344.1 mouse_genomes_project 1 34771587 34773784 + MGP_WSBEiJ_P0018707 Cox5b protein_coding protein_coding MGP_WSBEiJ_T0018708.1 MGP_WSBEiJ_G0015344.1 mouse_genomes_project 1 34771713 34773488 + MGP_WSBEiJ_P0018708 Cox5b protein_coding protein_coding MGP_WSBEiJ_T0018709.1 MGP_WSBEiJ_G0015344.1 mouse_genomes_project 1 34771731 34772654 + Cox5b protein_coding retained_intron MGP_WSBEiJ_T0018710.1 MGP_WSBEiJ_G0015344.1 mouse_genomes_project 1 34771745 34772611 + Cox5b protein_coding retained_intron MGP_WSBEiJ_T0018711.1 MGP_WSBEiJ_G0015344.1 mouse_genomes_project 1 34771747 34773487 + Cox5b protein_coding processed_transcript MGP_WSBEiJ_T0018712.1 MGP_WSBEiJ_G0015344.1 mouse_genomes_project 1 34771791 34773488 + MGP_WSBEiJ_P0018712 Cox5b protein_coding protein_coding MGP_WSBEiJ_T0019264.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56363283 56383392 - MGP_WSBEiJ_P0019264 Tyw5 protein_coding protein_coding MGP_WSBEiJ_T0019265.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56363286 56382762 - Tyw5 protein_coding retained_intron MGP_WSBEiJ_T0019266.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56363286 56382965 - MGP_WSBEiJ_P0019266 Tyw5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019267.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56363451 56367071 - Tyw5 protein_coding processed_transcript MGP_WSBEiJ_T0019268.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56363462 56369993 - Tyw5 protein_coding retained_intron MGP_WSBEiJ_T0019269.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56363712 56382734 - MGP_WSBEiJ_P0019269 Tyw5 protein_coding protein_coding MGP_WSBEiJ_T0019270.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56363732 56368034 - Tyw5 protein_coding retained_intron MGP_WSBEiJ_T0019271.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56367011 56377823 - Tyw5 protein_coding processed_transcript MGP_WSBEiJ_T0019272.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56367722 56382762 - MGP_WSBEiJ_P0019272 Tyw5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019273.1 MGP_WSBEiJ_G0015455.1 mouse_genomes_project 1 56369479 56382828 - Tyw5 protein_coding retained_intron MGP_WSBEiJ_T0005687.1 MGP_WSBEiJ_G0004773.1 mouse_genomes_project 1 71601704 71605625 + Gm8883 lincRNA lincRNA MGP_WSBEiJ_T0005688.1 MGP_WSBEiJ_G0004773.1 mouse_genomes_project 1 71601709 71605156 + Gm8883 lincRNA lincRNA MGP_WSBEiJ_T0005689.1 MGP_WSBEiJ_G0004773.1 mouse_genomes_project 1 71602095 71605008 + Gm8883 lincRNA lincRNA MGP_WSBEiJ_T0000447.1 MGP_WSBEiJ_G0000392.1 mouse_genomes_project 1 54458582 54460178 + TEC TEC MGP_WSBEiJ_T0022366.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166077064 166151259 - MGP_WSBEiJ_P0022366 Prrc2c protein_coding protein_coding MGP_WSBEiJ_T0022367.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166077066 166151290 - MGP_WSBEiJ_P0022367 Prrc2c protein_coding protein_coding MGP_WSBEiJ_T0022368.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166080366 166151215 - MGP_WSBEiJ_P0022368 Prrc2c protein_coding protein_coding MGP_WSBEiJ_T0022369.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166080412 166151284 - MGP_WSBEiJ_P0022369 Prrc2c protein_coding protein_coding MGP_WSBEiJ_T0022370.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166092344 166097909 - Prrc2c protein_coding retained_intron MGP_WSBEiJ_T0022371.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166120081 166151138 - MGP_WSBEiJ_P0022371 Prrc2c protein_coding protein_coding MGP_WSBEiJ_T0022372.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166122515 166123730 - Prrc2c protein_coding retained_intron MGP_WSBEiJ_T0022373.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166129596 166151231 - Prrc2c protein_coding retained_intron MGP_WSBEiJ_T0022374.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166130248 166151084 - MGP_WSBEiJ_P0022374 Prrc2c protein_coding protein_coding MGP_WSBEiJ_T0022375.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166132608 166134574 - Prrc2c protein_coding retained_intron MGP_WSBEiJ_T0022376.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166138315 166141466 - Prrc2c protein_coding retained_intron MGP_WSBEiJ_T0022377.1 MGP_WSBEiJ_G0016071.1 mouse_genomes_project 1 166141001 166151221 - Prrc2c protein_coding processed_transcript MGP_WSBEiJ_T0020761.1 MGP_WSBEiJ_G0015743.1 mouse_genomes_project 1 93882347 93892511 + MGP_WSBEiJ_P0020761 Agxt protein_coding protein_coding MGP_WSBEiJ_T0020762.1 MGP_WSBEiJ_G0015743.1 mouse_genomes_project 1 93882675 93885093 + Agxt protein_coding retained_intron MGP_WSBEiJ_T0020763.1 MGP_WSBEiJ_G0015743.1 mouse_genomes_project 1 93886969 93892507 + Agxt protein_coding processed_transcript MGP_WSBEiJ_T0020721.1 MGP_WSBEiJ_G0015736.1 mouse_genomes_project 1 93596075 93641267 - MGP_WSBEiJ_P0020721 Ankmy1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020722.1 MGP_WSBEiJ_G0015736.1 mouse_genomes_project 1 93605019 93641276 - MGP_WSBEiJ_P0020722 Ankmy1 protein_coding protein_coding MGP_WSBEiJ_T0020723.1 MGP_WSBEiJ_G0015736.1 mouse_genomes_project 1 93605019 93641276 - MGP_WSBEiJ_P0020723 Ankmy1 protein_coding protein_coding MGP_WSBEiJ_T0000498.1 MGP_WSBEiJ_G0000443.1 mouse_genomes_project 1 80119172 80121004 - TEC TEC MGP_WSBEiJ_T0019033.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44293101 44321884 + MGP_WSBEiJ_P0019033 Wdr75 protein_coding protein_coding MGP_WSBEiJ_T0019034.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44293384 44321869 + Wdr75 protein_coding retained_intron MGP_WSBEiJ_T0019035.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44293438 44300249 + Wdr75 protein_coding retained_intron MGP_WSBEiJ_T0019036.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44293442 44301822 + MGP_WSBEiJ_P0019036 Wdr75 protein_coding protein_coding MGP_WSBEiJ_T0019037.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44299880 44321780 + Wdr75 protein_coding processed_transcript MGP_WSBEiJ_T0019038.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44301578 44303340 + Wdr75 protein_coding processed_transcript MGP_WSBEiJ_T0019039.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44312946 44321884 + Wdr75 protein_coding retained_intron MGP_WSBEiJ_T0019040.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44320532 44321778 + Wdr75 protein_coding retained_intron MGP_WSBEiJ_T0019041.1 MGP_WSBEiJ_G0015408.1 mouse_genomes_project 1 44320825 44321881 + MGP_WSBEiJ_P0019041 Wdr75 protein_coding protein_coding MGP_WSBEiJ_T0022955.1 MGP_WSBEiJ_G0016213.1 mouse_genomes_project 1 177127845 177129712 - Ackr1 protein_coding processed_transcript MGP_WSBEiJ_T0022956.1 MGP_WSBEiJ_G0016213.1 mouse_genomes_project 1 177127849 177129464 - MGP_WSBEiJ_P0022956 Ackr1 protein_coding protein_coding MGP_WSBEiJ_T0022957.1 MGP_WSBEiJ_G0016213.1 mouse_genomes_project 1 177127851 177129635 - MGP_WSBEiJ_P0022957 Ackr1 protein_coding protein_coding MGP_WSBEiJ_T0097588.1 MGP_WSBEiJ_G0036251.1 mouse_genomes_project 1 173371751 173371858 - Gm22114 snRNA snRNA MGP_WSBEiJ_T0000448.1 MGP_WSBEiJ_G0000393.1 mouse_genomes_project 1 54877535 54877888 - TEC TEC MGP_WSBEiJ_T0005663.1 MGP_WSBEiJ_G0004752.1 mouse_genomes_project 1 59971299 59993346 + 2310016D23Rik lincRNA lincRNA MGP_WSBEiJ_T0011968.1 MGP_WSBEiJ_G0010098.1 mouse_genomes_project 1 118794607 118795883 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016450.1 MGP_WSBEiJ_G0014533.1 mouse_genomes_project 1 141400613 141403779 + Gm37423 processed_transcript retained_intron MGP_WSBEiJ_T0000397.1 MGP_WSBEiJ_G0000343.1 mouse_genomes_project 1 26220688 26222196 + TEC TEC MGP_WSBEiJ_T0018142.1 MGP_WSBEiJ_G0015233.1 mouse_genomes_project 1 2929073 2932783 - MGP_WSBEiJ_P0018142 Npbwr1 protein_coding protein_coding MGP_WSBEiJ_T0022363.1 MGP_WSBEiJ_G0016070.1 mouse_genomes_project 1 166052693 166064054 - 7420461P10Rik protein_coding processed_transcript MGP_WSBEiJ_T0022364.1 MGP_WSBEiJ_G0016070.1 mouse_genomes_project 1 166052693 166065319 - MGP_WSBEiJ_P0022364 7420461P10Rik protein_coding protein_coding MGP_WSBEiJ_T0022365.1 MGP_WSBEiJ_G0016070.1 mouse_genomes_project 1 166052703 166065432 - MGP_WSBEiJ_P0022365 7420461P10Rik protein_coding protein_coding MGP_WSBEiJ_T0022384.1 MGP_WSBEiJ_G0016073.1 mouse_genomes_project 1 166234297 166264136 - MGP_WSBEiJ_P0022384 Fmo1 protein_coding protein_coding MGP_WSBEiJ_T0022385.1 MGP_WSBEiJ_G0016073.1 mouse_genomes_project 1 166234503 166235210 - Fmo1 protein_coding processed_transcript MGP_WSBEiJ_T0022386.1 MGP_WSBEiJ_G0016073.1 mouse_genomes_project 1 166234786 166239360 - Fmo1 protein_coding processed_transcript MGP_WSBEiJ_T0022387.1 MGP_WSBEiJ_G0016073.1 mouse_genomes_project 1 166236263 166239360 - Fmo1 protein_coding retained_intron MGP_WSBEiJ_T0022388.1 MGP_WSBEiJ_G0016073.1 mouse_genomes_project 1 166238503 166257150 - MGP_WSBEiJ_P0022388 Fmo1 protein_coding protein_coding MGP_WSBEiJ_T0022389.1 MGP_WSBEiJ_G0016073.1 mouse_genomes_project 1 166240958 166257008 - MGP_WSBEiJ_P0022389 Fmo1 protein_coding protein_coding MGP_WSBEiJ_T0022390.1 MGP_WSBEiJ_G0016073.1 mouse_genomes_project 1 166240984 166256902 - MGP_WSBEiJ_P0022390 Fmo1 protein_coding protein_coding MGP_WSBEiJ_T0011780.1 MGP_WSBEiJ_G0009910.1 mouse_genomes_project 1 44098631 44099359 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002904.1 MGP_WSBEiJ_G0002733.1 mouse_genomes_project 1 189583070 189587513 - Gm34882 antisense antisense MGP_WSBEiJ_T0019733.1 MGP_WSBEiJ_G0015539.1 mouse_genomes_project 1 70697917 70769864 - MGP_WSBEiJ_P0019733 Bard1 protein_coding protein_coding MGP_WSBEiJ_T0020666.1 MGP_WSBEiJ_G0015719.1 mouse_genomes_project 1 92093256 92135969 - MGP_WSBEiJ_P0020666 Per2 protein_coding protein_coding MGP_WSBEiJ_T0020667.1 MGP_WSBEiJ_G0015719.1 mouse_genomes_project 1 92124419 92126553 - Per2 protein_coding processed_transcript MGP_WSBEiJ_T0005792.1 MGP_WSBEiJ_G0004856.1 mouse_genomes_project 1 121920188 121922846 + 1700012E03Rik lincRNA lincRNA MGP_WSBEiJ_T0018094.1 MGP_WSBEiJ_G0015223.1 mouse_genomes_project 1 1046603 1282483 - MGP_WSBEiJ_P0018094 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0002838.1 MGP_WSBEiJ_G0002681.1 mouse_genomes_project 1 149531446 149568390 - Gm15584 antisense antisense MGP_WSBEiJ_T0002815.1 MGP_WSBEiJ_G0002662.1 mouse_genomes_project 1 133267520 133268567 + Gm28914 antisense antisense MGP_WSBEiJ_T0005919.1 MGP_WSBEiJ_G0004959.1 mouse_genomes_project 1 185930868 185953844 + lincRNA lincRNA MGP_WSBEiJ_T0005920.1 MGP_WSBEiJ_G0004959.1 mouse_genomes_project 1 185930894 185943249 + lincRNA lincRNA MGP_WSBEiJ_T0005836.1 MGP_WSBEiJ_G0004892.1 mouse_genomes_project 1 140336565 140380402 - Gm26936 lincRNA lincRNA MGP_WSBEiJ_T0005837.1 MGP_WSBEiJ_G0004892.1 mouse_genomes_project 1 140374309 140380377 - Gm26936 lincRNA lincRNA MGP_WSBEiJ_T0020188.1 MGP_WSBEiJ_G0015619.1 mouse_genomes_project 1 79595989 79664503 - MGP_WSBEiJ_P0020188 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020189.1 MGP_WSBEiJ_G0015619.1 mouse_genomes_project 1 79596330 79664506 - MGP_WSBEiJ_P0020189 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098787.1 MGP_WSBEiJ_G0037450.1 mouse_genomes_project 1 124117946 124118090 + Gm25771 snoRNA snoRNA MGP_WSBEiJ_T0012059.1 MGP_WSBEiJ_G0010189.1 mouse_genomes_project 1 158981792 158982098 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020744.1 MGP_WSBEiJ_G0015740.1 mouse_genomes_project 1 93693801 93726504 + MGP_WSBEiJ_P0020744 Gpr35 protein_coding protein_coding MGP_WSBEiJ_T0020745.1 MGP_WSBEiJ_G0015740.1 mouse_genomes_project 1 93716935 93728862 + MGP_WSBEiJ_P0020745 Gpr35 protein_coding protein_coding MGP_WSBEiJ_T0020746.1 MGP_WSBEiJ_G0015740.1 mouse_genomes_project 1 93716935 93730071 + MGP_WSBEiJ_P0020746 Gpr35 protein_coding protein_coding MGP_WSBEiJ_T0020747.1 MGP_WSBEiJ_G0015740.1 mouse_genomes_project 1 93719160 93729682 + MGP_WSBEiJ_P0020747 Gpr35 protein_coding protein_coding MGP_WSBEiJ_T0020748.1 MGP_WSBEiJ_G0015740.1 mouse_genomes_project 1 93722734 93730209 + MGP_WSBEiJ_P0020748 Gpr35 protein_coding protein_coding MGP_WSBEiJ_T0009419.1 MGP_WSBEiJ_G0007576.1 mouse_genomes_project 1 199781910 199781991 + Mir29b-2 miRNA miRNA MGP_WSBEiJ_T0005928.1 MGP_WSBEiJ_G0004964.1 mouse_genomes_project 1 187320781 187320935 + Gm38079 lincRNA lincRNA MGP_WSBEiJ_T0000381.1 MGP_WSBEiJ_G0000327.1 mouse_genomes_project 1 22857368 22859899 - TEC TEC MGP_WSBEiJ_T0100429.1 MGP_WSBEiJ_G0038888.1 mouse_genomes_project 1 176939846 176941030 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009333.1 MGP_WSBEiJ_G0007490.1 mouse_genomes_project 1 34569688 34569829 + miRNA miRNA MGP_WSBEiJ_T0011814.1 MGP_WSBEiJ_G0009944.1 mouse_genomes_project 1 54004079 54004783 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000669.1 MGP_WSBEiJ_G0000612.1 mouse_genomes_project 1 160581755 160584152 - TEC TEC MGP_WSBEiJ_T0000346.1 MGP_WSBEiJ_G0000294.1 mouse_genomes_project 1 7931295 7933218 - TEC TEC MGP_WSBEiJ_T0009376.1 MGP_WSBEiJ_G0007533.1 mouse_genomes_project 1 99488014 99488124 + Gm26134 miRNA miRNA MGP_WSBEiJ_T0005740.1 MGP_WSBEiJ_G0004812.1 mouse_genomes_project 1 89829350 89887883 - Gm28342 lincRNA lincRNA MGP_WSBEiJ_T0020378.1 MGP_WSBEiJ_G0015658.1 mouse_genomes_project 1 86346484 86377018 + MGP_WSBEiJ_P0020378 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022720.1 MGP_WSBEiJ_G0016156.1 mouse_genomes_project 1 174891348 174892040 - Ndufs2 protein_coding retained_intron MGP_WSBEiJ_T0022721.1 MGP_WSBEiJ_G0016156.1 mouse_genomes_project 1 174891348 174903675 - Ndufs2 protein_coding retained_intron MGP_WSBEiJ_T0022722.1 MGP_WSBEiJ_G0016156.1 mouse_genomes_project 1 174891348 174894026 - Ndufs2 protein_coding processed_transcript MGP_WSBEiJ_T0022723.1 MGP_WSBEiJ_G0016156.1 mouse_genomes_project 1 174891348 174903675 - MGP_WSBEiJ_P0022723 Ndufs2 protein_coding protein_coding MGP_WSBEiJ_T0022724.1 MGP_WSBEiJ_G0016156.1 mouse_genomes_project 1 174891348 174903675 - MGP_WSBEiJ_P0022724 Ndufs2 protein_coding protein_coding MGP_WSBEiJ_T0022725.1 MGP_WSBEiJ_G0016156.1 mouse_genomes_project 1 174893642 174896542 - Ndufs2 protein_coding processed_transcript MGP_WSBEiJ_T0022726.1 MGP_WSBEiJ_G0016156.1 mouse_genomes_project 1 174895017 174907814 - MGP_WSBEiJ_P0022726 Ndufs2 protein_coding protein_coding MGP_WSBEiJ_T0022727.1 MGP_WSBEiJ_G0016156.1 mouse_genomes_project 1 174895235 174907951 - MGP_WSBEiJ_P0022727 Ndufs2 protein_coding protein_coding MGP_WSBEiJ_T0000772.1 MGP_WSBEiJ_G0000712.1 mouse_genomes_project 1 198198688 198200783 + TEC TEC MGP_WSBEiJ_T0011901.1 MGP_WSBEiJ_G0010031.1 mouse_genomes_project 1 87047878 87048300 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002780.1 MGP_WSBEiJ_G0002636.1 mouse_genomes_project 1 87228474 87373856 - Gm28375 antisense antisense MGP_WSBEiJ_T0011898.1 MGP_WSBEiJ_G0010028.1 mouse_genomes_project 1 86553638 86553965 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002888.1 MGP_WSBEiJ_G0002720.1 mouse_genomes_project 1 176077149 176077817 + Gm36937 antisense antisense MGP_WSBEiJ_T0021069.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121096384 121288889 - MGP_WSBEiJ_P0021069 Ptpn4 protein_coding protein_coding MGP_WSBEiJ_T0021070.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121101961 121135553 - MGP_WSBEiJ_P0021070 Ptpn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021071.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121137569 121288623 - MGP_WSBEiJ_P0021071 Ptpn4 protein_coding protein_coding MGP_WSBEiJ_T0021072.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121140592 121192142 - MGP_WSBEiJ_P0021072 Ptpn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021073.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121152893 121166430 - Ptpn4 protein_coding retained_intron MGP_WSBEiJ_T0021074.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121176971 121227911 - MGP_WSBEiJ_P0021074 Ptpn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021075.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121194110 121250064 - MGP_WSBEiJ_P0021075 Ptpn4 protein_coding protein_coding MGP_WSBEiJ_T0021076.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121208839 121288347 - MGP_WSBEiJ_P0021076 Ptpn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021077.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121209179 121288347 - MGP_WSBEiJ_P0021077 Ptpn4 protein_coding protein_coding MGP_WSBEiJ_T0021078.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121217403 121250084 - MGP_WSBEiJ_P0021078 Ptpn4 protein_coding protein_coding MGP_WSBEiJ_T0021079.1 MGP_WSBEiJ_G0015810.1 mouse_genomes_project 1 121217463 121288275 - MGP_WSBEiJ_P0021079 Ptpn4 protein_coding protein_coding MGP_WSBEiJ_T0011721.1 MGP_WSBEiJ_G0009851.1 mouse_genomes_project 1 24022607 24023258 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022641.1 MGP_WSBEiJ_G0016135.1 mouse_genomes_project 1 173878100 173891389 + MGP_WSBEiJ_P0022641 protein_coding protein_coding MGP_WSBEiJ_T0022761.1 MGP_WSBEiJ_G0016161.1 mouse_genomes_project 1 174944970 174952399 - MGP_WSBEiJ_P0022761 Ufc1 protein_coding protein_coding MGP_WSBEiJ_T0022762.1 MGP_WSBEiJ_G0016161.1 mouse_genomes_project 1 174944972 174946834 - Ufc1 protein_coding retained_intron MGP_WSBEiJ_T0022763.1 MGP_WSBEiJ_G0016161.1 mouse_genomes_project 1 174945101 174952316 - MGP_WSBEiJ_P0022763 Ufc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022764.1 MGP_WSBEiJ_G0016161.1 mouse_genomes_project 1 174945119 174952362 - MGP_WSBEiJ_P0022764 Ufc1 protein_coding protein_coding MGP_WSBEiJ_T0022765.1 MGP_WSBEiJ_G0016161.1 mouse_genomes_project 1 174945184 174952315 - Ufc1 protein_coding retained_intron MGP_WSBEiJ_T0011049.1 MGP_WSBEiJ_G0009206.1 mouse_genomes_project 1 36146928 36147165 + Gm23409 misc_RNA misc_RNA MGP_WSBEiJ_T0019534.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62430297 62431663 - Ndufs1 protein_coding retained_intron MGP_WSBEiJ_T0019535.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62430297 62464799 - MGP_WSBEiJ_P0019535 Ndufs1 protein_coding protein_coding MGP_WSBEiJ_T0019536.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62430305 62435270 - Ndufs1 protein_coding retained_intron MGP_WSBEiJ_T0019537.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62430390 62434938 - MGP_WSBEiJ_P0019537 Ndufs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019538.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62430436 62464709 - MGP_WSBEiJ_P0019538 Ndufs1 protein_coding protein_coding MGP_WSBEiJ_T0019539.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62437610 62464640 - MGP_WSBEiJ_P0019539 Ndufs1 protein_coding protein_coding MGP_WSBEiJ_T0019540.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62437778 62440378 - Ndufs1 protein_coding retained_intron MGP_WSBEiJ_T0019541.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62444218 62464646 - Ndufs1 protein_coding retained_intron MGP_WSBEiJ_T0019542.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62446166 62464644 - Ndufs1 protein_coding retained_intron MGP_WSBEiJ_T0019543.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62451109 62464667 - MGP_WSBEiJ_P0019543 Ndufs1 protein_coding protein_coding MGP_WSBEiJ_T0019544.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62452291 62464643 - MGP_WSBEiJ_P0019544 Ndufs1 protein_coding protein_coding MGP_WSBEiJ_T0019545.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62456376 62464770 - MGP_WSBEiJ_P0019545 Ndufs1 protein_coding protein_coding MGP_WSBEiJ_T0019546.1 MGP_WSBEiJ_G0015500.1 mouse_genomes_project 1 62458829 62464810 - MGP_WSBEiJ_P0019546 Ndufs1 protein_coding protein_coding MGP_WSBEiJ_T0011737.1 MGP_WSBEiJ_G0009867.1 mouse_genomes_project 1 31242619 31243530 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002935.1 MGP_WSBEiJ_G0002756.1 mouse_genomes_project 1 197887840 197913201 + 4930570N18Rik antisense antisense MGP_WSBEiJ_T0097161.1 MGP_WSBEiJ_G0035842.1 mouse_genomes_project 1 44271708 44271911 + Gm23984 ribozyme ribozyme MGP_WSBEiJ_T0020785.1 MGP_WSBEiJ_G0015749.1 mouse_genomes_project 1 94100050 94131549 + MGP_WSBEiJ_P0020785 Ppp1r7 protein_coding protein_coding MGP_WSBEiJ_T0020786.1 MGP_WSBEiJ_G0015749.1 mouse_genomes_project 1 94100851 94110910 + MGP_WSBEiJ_P0020786 Ppp1r7 protein_coding protein_coding MGP_WSBEiJ_T0020787.1 MGP_WSBEiJ_G0015749.1 mouse_genomes_project 1 94100903 94110841 + MGP_WSBEiJ_P0020787 Ppp1r7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011868.1 MGP_WSBEiJ_G0009998.1 mouse_genomes_project 1 68963417 68964168 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009358.1 MGP_WSBEiJ_G0007515.1 mouse_genomes_project 1 76382736 76382820 + Mir6343 miRNA miRNA MGP_WSBEiJ_T0000771.1 MGP_WSBEiJ_G0000711.1 mouse_genomes_project 1 198062763 198063391 + TEC TEC MGP_WSBEiJ_T0019053.1 MGP_WSBEiJ_G0015412.1 mouse_genomes_project 1 44576664 45004039 + protein_coding processed_transcript MGP_WSBEiJ_T0020548.1 MGP_WSBEiJ_G0015694.1 mouse_genomes_project 1 88776057 88866964 + MGP_WSBEiJ_P0020548 Trpm8 protein_coding protein_coding MGP_WSBEiJ_T0020549.1 MGP_WSBEiJ_G0015694.1 mouse_genomes_project 1 88780811 88867406 + MGP_WSBEiJ_P0020549 Trpm8 protein_coding protein_coding MGP_WSBEiJ_T0020550.1 MGP_WSBEiJ_G0015694.1 mouse_genomes_project 1 88794347 88866964 + MGP_WSBEiJ_P0020550 Trpm8 protein_coding protein_coding MGP_WSBEiJ_T0018350.1 MGP_WSBEiJ_G0015269.1 mouse_genomes_project 1 13344119 13372954 + MGP_WSBEiJ_P0018350 Rdh10 protein_coding protein_coding MGP_WSBEiJ_T0018351.1 MGP_WSBEiJ_G0015269.1 mouse_genomes_project 1 13369826 13371872 + Rdh10 protein_coding retained_intron MGP_WSBEiJ_T0020661.1 MGP_WSBEiJ_G0015718.1 mouse_genomes_project 1 92088767 92090507 - Hes6 protein_coding retained_intron MGP_WSBEiJ_T0020662.1 MGP_WSBEiJ_G0015718.1 mouse_genomes_project 1 92088767 92090493 - Hes6 protein_coding retained_intron MGP_WSBEiJ_T0020663.1 MGP_WSBEiJ_G0015718.1 mouse_genomes_project 1 92088767 92090507 - MGP_WSBEiJ_P0020663 Hes6 protein_coding protein_coding MGP_WSBEiJ_T0020664.1 MGP_WSBEiJ_G0015718.1 mouse_genomes_project 1 92089571 92090493 - Hes6 protein_coding retained_intron MGP_WSBEiJ_T0020665.1 MGP_WSBEiJ_G0015718.1 mouse_genomes_project 1 92089632 92091323 - Hes6 protein_coding processed_transcript MGP_WSBEiJ_T0023595.1 MGP_WSBEiJ_G0016361.1 mouse_genomes_project 1 197524924 197536199 - MGP_WSBEiJ_P0023595 Sertad4 protein_coding protein_coding MGP_WSBEiJ_T0023596.1 MGP_WSBEiJ_G0016361.1 mouse_genomes_project 1 197524925 197532184 - MGP_WSBEiJ_P0023596 Sertad4 protein_coding protein_coding MGP_WSBEiJ_T0023597.1 MGP_WSBEiJ_G0016361.1 mouse_genomes_project 1 197527500 197532184 - MGP_WSBEiJ_P0023597 Sertad4 protein_coding protein_coding MGP_WSBEiJ_T0023598.1 MGP_WSBEiJ_G0016361.1 mouse_genomes_project 1 197534648 197535929 - Sertad4 protein_coding processed_transcript MGP_WSBEiJ_T0019763.1 MGP_WSBEiJ_G0015544.1 mouse_genomes_project 1 72018270 72045852 - MGP_WSBEiJ_P0019763 Pecr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019764.1 MGP_WSBEiJ_G0015544.1 mouse_genomes_project 1 72018275 72045906 - MGP_WSBEiJ_P0019764 Pecr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019765.1 MGP_WSBEiJ_G0015544.1 mouse_genomes_project 1 72018275 72045907 - MGP_WSBEiJ_P0019765 Pecr protein_coding protein_coding MGP_WSBEiJ_T0019766.1 MGP_WSBEiJ_G0015544.1 mouse_genomes_project 1 72026338 72045852 - MGP_WSBEiJ_P0019766 Pecr protein_coding protein_coding MGP_WSBEiJ_T0019621.1 MGP_WSBEiJ_G0015518.1 mouse_genomes_project 1 64422880 64425045 - MGP_WSBEiJ_P0019621 Crygc protein_coding protein_coding MGP_WSBEiJ_T0019622.1 MGP_WSBEiJ_G0015518.1 mouse_genomes_project 1 64422886 64424877 - MGP_WSBEiJ_P0019622 Crygc protein_coding protein_coding MGP_WSBEiJ_T0020615.1 MGP_WSBEiJ_G0015710.1 mouse_genomes_project 1 91807010 91809667 + Rbm44 protein_coding retained_intron MGP_WSBEiJ_T0020616.1 MGP_WSBEiJ_G0015710.1 mouse_genomes_project 1 91807022 91814639 + MGP_WSBEiJ_P0020616 Rbm44 protein_coding protein_coding MGP_WSBEiJ_T0020617.1 MGP_WSBEiJ_G0015710.1 mouse_genomes_project 1 91807024 91832872 + MGP_WSBEiJ_P0020617 Rbm44 protein_coding protein_coding MGP_WSBEiJ_T0020618.1 MGP_WSBEiJ_G0015710.1 mouse_genomes_project 1 91830703 91832371 + Rbm44 protein_coding retained_intron MGP_WSBEiJ_T0000647.1 MGP_WSBEiJ_G0000590.1 mouse_genomes_project 1 153167548 153170327 + TEC TEC MGP_WSBEiJ_T0019771.1 MGP_WSBEiJ_G0015547.1 mouse_genomes_project 1 72199678 72311738 - MGP_WSBEiJ_P0019771 March4 protein_coding protein_coding MGP_WSBEiJ_T0000526.1 MGP_WSBEiJ_G0000471.1 mouse_genomes_project 1 87352993 87355921 + TEC TEC MGP_WSBEiJ_T0000525.1 MGP_WSBEiJ_G0000470.1 mouse_genomes_project 1 87216204 87220226 + TEC TEC MGP_WSBEiJ_T0005900.1 MGP_WSBEiJ_G0004942.1 mouse_genomes_project 1 173766411 173767552 + Gm37748 lincRNA lincRNA MGP_WSBEiJ_T0020749.1 MGP_WSBEiJ_G0015741.1 mouse_genomes_project 1 93750191 93756219 + MGP_WSBEiJ_P0020749 Aqp12 protein_coding protein_coding MGP_WSBEiJ_T0020545.1 MGP_WSBEiJ_G0015691.1 mouse_genomes_project 1 88603026 88604077 - MGP_WSBEiJ_P0020545 Dnajb3 protein_coding protein_coding MGP_WSBEiJ_T0011943.1 MGP_WSBEiJ_G0010073.1 mouse_genomes_project 1 109178458 109179057 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005812.1 MGP_WSBEiJ_G0004871.1 mouse_genomes_project 1 132368330 132382000 - lincRNA lincRNA MGP_WSBEiJ_T0009367.1 MGP_WSBEiJ_G0007524.1 mouse_genomes_project 1 86902358 86902415 - Gm22955 miRNA miRNA MGP_WSBEiJ_T0000592.1 MGP_WSBEiJ_G0000537.1 mouse_genomes_project 1 131826564 131829435 + TEC TEC MGP_WSBEiJ_T0018496.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22571156 22739563 - MGP_WSBEiJ_P0018496 Adgrb3 protein_coding protein_coding MGP_WSBEiJ_T0018497.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22571230 23362389 - MGP_WSBEiJ_P0018497 Adgrb3 protein_coding protein_coding MGP_WSBEiJ_T0018498.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22571230 23365768 - MGP_WSBEiJ_P0018498 Adgrb3 protein_coding protein_coding MGP_WSBEiJ_T0018499.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22571230 23365961 - MGP_WSBEiJ_P0018499 Adgrb3 protein_coding protein_coding MGP_WSBEiJ_T0018500.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22571358 23363010 - MGP_WSBEiJ_P0018500 Adgrb3 protein_coding protein_coding MGP_WSBEiJ_T0018501.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22571371 22739837 - Adgrb3 protein_coding retained_intron MGP_WSBEiJ_T0018502.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22595534 22739783 - Adgrb3 protein_coding retained_intron MGP_WSBEiJ_T0018503.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22635743 22714113 - Adgrb3 protein_coding processed_transcript MGP_WSBEiJ_T0018504.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22712941 22715083 - Adgrb3 protein_coding retained_intron MGP_WSBEiJ_T0018505.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 22727972 22739564 - Adgrb3 protein_coding retained_intron MGP_WSBEiJ_T0018506.1 MGP_WSBEiJ_G0015305.1 mouse_genomes_project 1 23021118 23362597 - Adgrb3 protein_coding retained_intron MGP_WSBEiJ_T0022562.1 MGP_WSBEiJ_G0016112.1 mouse_genomes_project 1 169888587 169904926 + MGP_WSBEiJ_P0022562 Tada1 protein_coding protein_coding MGP_WSBEiJ_T0022563.1 MGP_WSBEiJ_G0016112.1 mouse_genomes_project 1 169888787 169900234 + Tada1 protein_coding retained_intron MGP_WSBEiJ_T0022564.1 MGP_WSBEiJ_G0016112.1 mouse_genomes_project 1 169888794 169895455 + Tada1 protein_coding retained_intron MGP_WSBEiJ_T0022565.1 MGP_WSBEiJ_G0016112.1 mouse_genomes_project 1 169888809 169891941 + MGP_WSBEiJ_P0022565 Tada1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000543.1 MGP_WSBEiJ_G0000488.1 mouse_genomes_project 1 97179629 97181923 + TEC TEC MGP_WSBEiJ_T0002753.1 MGP_WSBEiJ_G0002617.1 mouse_genomes_project 1 61730267 61772694 - Pard3bos3 antisense antisense MGP_WSBEiJ_T0022948.1 MGP_WSBEiJ_G0016207.1 mouse_genomes_project 1 176993058 176994000 + MGP_WSBEiJ_P0022948 Olfr218 protein_coding protein_coding MGP_WSBEiJ_T0018306.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10320284 10558157 - MGP_WSBEiJ_P0018306 Ncoa2 protein_coding protein_coding MGP_WSBEiJ_T0018307.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10320338 10559764 - MGP_WSBEiJ_P0018307 Ncoa2 protein_coding protein_coding MGP_WSBEiJ_T0018308.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10323657 10559764 - MGP_WSBEiJ_P0018308 Ncoa2 protein_coding protein_coding MGP_WSBEiJ_T0018309.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10326443 10327707 - Ncoa2 protein_coding processed_transcript MGP_WSBEiJ_T0018310.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10327675 10329584 - Ncoa2 protein_coding retained_intron MGP_WSBEiJ_T0018311.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10329505 10332235 - Ncoa2 protein_coding retained_intron MGP_WSBEiJ_T0018312.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10347936 10559764 - Ncoa2 protein_coding retained_intron MGP_WSBEiJ_T0018313.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10349362 10559710 - Ncoa2 protein_coding retained_intron MGP_WSBEiJ_T0018314.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10365934 10558147 - Ncoa2 protein_coding retained_intron MGP_WSBEiJ_T0018315.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10368221 10559710 - Ncoa2 protein_coding retained_intron MGP_WSBEiJ_T0018316.1 MGP_WSBEiJ_G0015257.1 mouse_genomes_project 1 10373720 10486086 - MGP_WSBEiJ_P0018316 Ncoa2 protein_coding protein_coding MGP_WSBEiJ_T0011978.1 MGP_WSBEiJ_G0010108.1 mouse_genomes_project 1 121265423 121265786 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019313.1 MGP_WSBEiJ_G0015464.1 mouse_genomes_project 1 57398948 57415103 + MGP_WSBEiJ_P0019313 Bzw1 protein_coding protein_coding MGP_WSBEiJ_T0019314.1 MGP_WSBEiJ_G0015464.1 mouse_genomes_project 1 57399174 57409055 + MGP_WSBEiJ_P0019314 Bzw1 protein_coding protein_coding MGP_WSBEiJ_T0019315.1 MGP_WSBEiJ_G0015464.1 mouse_genomes_project 1 57399520 57412852 + MGP_WSBEiJ_P0019315 Bzw1 protein_coding protein_coding MGP_WSBEiJ_T0018894.1 MGP_WSBEiJ_G0015378.1 mouse_genomes_project 1 38353082 38393405 + MGP_WSBEiJ_P0018894 Il1r2 protein_coding protein_coding MGP_WSBEiJ_T0018895.1 MGP_WSBEiJ_G0015378.1 mouse_genomes_project 1 38364931 38410574 + MGP_WSBEiJ_P0018895 Il1r2 protein_coding protein_coding MGP_WSBEiJ_T0018896.1 MGP_WSBEiJ_G0015378.1 mouse_genomes_project 1 38365025 38410562 + MGP_WSBEiJ_P0018896 Il1r2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018897.1 MGP_WSBEiJ_G0015378.1 mouse_genomes_project 1 38366219 38383671 + MGP_WSBEiJ_P0018897 Il1r2 protein_coding protein_coding MGP_WSBEiJ_T0011946.1 MGP_WSBEiJ_G0010076.1 mouse_genomes_project 1 109606787 109609256 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022949.1 MGP_WSBEiJ_G0016208.1 mouse_genomes_project 1 177006513 177007547 + MGP_WSBEiJ_P0022949 Olfr1404 protein_coding protein_coding MGP_WSBEiJ_T0011887.1 MGP_WSBEiJ_G0010017.1 mouse_genomes_project 1 80373467 80375142 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020000.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75031264 75032137 - Glb1l protein_coding processed_transcript MGP_WSBEiJ_T0020001.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75031271 75045595 - MGP_WSBEiJ_P0020001 Glb1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020002.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75032119 75035009 - Glb1l protein_coding retained_intron MGP_WSBEiJ_T0020003.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75032375 75045595 - MGP_WSBEiJ_P0020003 Glb1l protein_coding protein_coding MGP_WSBEiJ_T0020004.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75032519 75044240 - MGP_WSBEiJ_P0020004 Glb1l protein_coding protein_coding MGP_WSBEiJ_T0020005.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75032519 75036727 - MGP_WSBEiJ_P0020005 Glb1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020006.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75032857 75044311 - Glb1l protein_coding retained_intron MGP_WSBEiJ_T0020007.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75033121 75035085 - Glb1l protein_coding retained_intron MGP_WSBEiJ_T0020008.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75034788 75036132 - Glb1l protein_coding retained_intron MGP_WSBEiJ_T0020009.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75035042 75035660 - Glb1l protein_coding retained_intron MGP_WSBEiJ_T0020010.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75036555 75045630 - MGP_WSBEiJ_P0020010 Glb1l protein_coding protein_coding MGP_WSBEiJ_T0020011.1 MGP_WSBEiJ_G0015592.1 mouse_genomes_project 1 75042905 75045570 - Glb1l protein_coding retained_intron MGP_WSBEiJ_T0021952.1 MGP_WSBEiJ_G0015997.1 mouse_genomes_project 1 155451874 155705449 - MGP_WSBEiJ_P0021952 Rgl1 protein_coding protein_coding MGP_WSBEiJ_T0021953.1 MGP_WSBEiJ_G0015997.1 mouse_genomes_project 1 155451894 155562124 - MGP_WSBEiJ_P0021953 Rgl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0021954.1 MGP_WSBEiJ_G0015997.1 mouse_genomes_project 1 155452065 155562331 - MGP_WSBEiJ_P0021954 Rgl1 protein_coding protein_coding MGP_WSBEiJ_T0021955.1 MGP_WSBEiJ_G0015997.1 mouse_genomes_project 1 155453857 155705495 - MGP_WSBEiJ_P0021955 Rgl1 protein_coding protein_coding MGP_WSBEiJ_T0021956.1 MGP_WSBEiJ_G0015997.1 mouse_genomes_project 1 155488558 155490095 - Rgl1 protein_coding retained_intron MGP_WSBEiJ_T0021957.1 MGP_WSBEiJ_G0015997.1 mouse_genomes_project 1 155494597 155529860 - Rgl1 protein_coding processed_transcript MGP_WSBEiJ_T0021958.1 MGP_WSBEiJ_G0015997.1 mouse_genomes_project 1 155494597 155562143 - MGP_WSBEiJ_P0021958 Rgl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000728.1 MGP_WSBEiJ_G0000671.1 mouse_genomes_project 1 181642315 181643546 - TEC TEC MGP_WSBEiJ_T0011864.1 MGP_WSBEiJ_G0009994.1 mouse_genomes_project 1 66379198 66380835 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000604.1 MGP_WSBEiJ_G0000548.1 mouse_genomes_project 1 135922844 135926053 - TEC TEC MGP_WSBEiJ_T0005579.1 MGP_WSBEiJ_G0004692.1 mouse_genomes_project 1 19426849 19429536 + Gm26580 lincRNA lincRNA MGP_WSBEiJ_T0020539.1 MGP_WSBEiJ_G0015688.1 mouse_genomes_project 1 88383084 88625827 + MGP_WSBEiJ_P0020539 protein_coding protein_coding MGP_WSBEiJ_T0020540.1 MGP_WSBEiJ_G0015688.1 mouse_genomes_project 1 88383131 88625759 + MGP_WSBEiJ_P0020540 protein_coding protein_coding MGP_WSBEiJ_T0016399.1 MGP_WSBEiJ_G0014516.1 mouse_genomes_project 1 50853910 50931168 + Gm28177 processed_transcript processed_transcript MGP_WSBEiJ_T0018510.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28552037 28618519 - MGP_WSBEiJ_P0018510 Phf3 protein_coding protein_coding MGP_WSBEiJ_T0018511.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28552040 28607172 - MGP_WSBEiJ_P0018511 Phf3 protein_coding protein_coding MGP_WSBEiJ_T0018512.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28553244 28561161 - MGP_WSBEiJ_P0018512 Phf3 protein_coding protein_coding MGP_WSBEiJ_T0018513.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28555897 28559537 - Phf3 protein_coding retained_intron MGP_WSBEiJ_T0018514.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28562352 28563984 - Phf3 protein_coding retained_intron MGP_WSBEiJ_T0018515.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28564019 28618629 - Phf3 protein_coding retained_intron MGP_WSBEiJ_T0018516.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28565763 28618855 - Phf3 protein_coding retained_intron MGP_WSBEiJ_T0018517.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28570674 28618738 - MGP_WSBEiJ_P0018517 Phf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018518.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28571506 28574292 - Phf3 protein_coding retained_intron MGP_WSBEiJ_T0018519.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28574864 28606986 - Phf3 protein_coding processed_transcript MGP_WSBEiJ_T0018520.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28579879 28581192 - Phf3 protein_coding retained_intron MGP_WSBEiJ_T0018521.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28581653 28618828 - MGP_WSBEiJ_P0018521 Phf3 protein_coding protein_coding MGP_WSBEiJ_T0018522.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28606985 28618186 - MGP_WSBEiJ_P0018522 Phf3 protein_coding protein_coding MGP_WSBEiJ_T0018523.1 MGP_WSBEiJ_G0015309.1 mouse_genomes_project 1 28617585 28618409 - Phf3 protein_coding retained_intron MGP_WSBEiJ_T0011782.1 MGP_WSBEiJ_G0009912.1 mouse_genomes_project 1 44407763 44408945 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002692.1 MGP_WSBEiJ_G0002570.1 mouse_genomes_project 1 13473297 13488790 + Gm28095 antisense antisense MGP_WSBEiJ_T0000709.1 MGP_WSBEiJ_G0000652.1 mouse_genomes_project 1 175432027 175433735 + TEC TEC MGP_WSBEiJ_T0018611.1 MGP_WSBEiJ_G0015328.1 mouse_genomes_project 1 32673348 32812000 + MGP_WSBEiJ_P0018611 protein_coding protein_coding MGP_WSBEiJ_T0018612.1 MGP_WSBEiJ_G0015328.1 mouse_genomes_project 1 32729577 32811090 + MGP_WSBEiJ_P0018612 protein_coding protein_coding MGP_WSBEiJ_T0018613.1 MGP_WSBEiJ_G0015328.1 mouse_genomes_project 1 32746997 32806405 + MGP_WSBEiJ_P0018613 protein_coding protein_coding MGP_WSBEiJ_T0018614.1 MGP_WSBEiJ_G0015328.1 mouse_genomes_project 1 32801025 32812576 + MGP_WSBEiJ_P0018614 protein_coding protein_coding MGP_WSBEiJ_T0018615.1 MGP_WSBEiJ_G0015328.1 mouse_genomes_project 1 32801042 32808479 + protein_coding retained_intron MGP_WSBEiJ_T0018616.1 MGP_WSBEiJ_G0015328.1 mouse_genomes_project 1 32801043 32805959 + protein_coding retained_intron MGP_WSBEiJ_T0018617.1 MGP_WSBEiJ_G0015328.1 mouse_genomes_project 1 32801062 32808172 + MGP_WSBEiJ_P0018617 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000436.1 MGP_WSBEiJ_G0000381.1 mouse_genomes_project 1 43970159 43977352 - TEC TEC MGP_WSBEiJ_T0009354.1 MGP_WSBEiJ_G0007511.1 mouse_genomes_project 1 74239453 74239538 + Mir26b miRNA miRNA MGP_WSBEiJ_T0000519.1 MGP_WSBEiJ_G0000464.1 mouse_genomes_project 1 86903013 86905272 + TEC TEC MGP_WSBEiJ_T0000486.1 MGP_WSBEiJ_G0000431.1 mouse_genomes_project 1 71552948 71556462 - TEC TEC MGP_WSBEiJ_T0097555.1 MGP_WSBEiJ_G0036218.1 mouse_genomes_project 1 87680126 87680233 - Gm22549 snRNA snRNA MGP_WSBEiJ_T0000455.1 MGP_WSBEiJ_G0000400.1 mouse_genomes_project 1 59083621 59089083 + TEC TEC MGP_WSBEiJ_T0011972.1 MGP_WSBEiJ_G0010102.1 mouse_genomes_project 1 120055578 120055892 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011954.1 MGP_WSBEiJ_G0010084.1 mouse_genomes_project 1 112524212 112524275 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009407.1 MGP_WSBEiJ_G0007564.1 mouse_genomes_project 1 180756463 180756562 - Mir350 miRNA miRNA MGP_WSBEiJ_T0097599.1 MGP_WSBEiJ_G0036262.1 mouse_genomes_project 1 182475466 182475572 + Gm24919 snRNA snRNA MGP_WSBEiJ_T0012065.1 MGP_WSBEiJ_G0010195.1 mouse_genomes_project 1 160807788 160807943 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097569.1 MGP_WSBEiJ_G0036232.1 mouse_genomes_project 1 130345197 130345302 - Gm25384 snRNA snRNA MGP_WSBEiJ_T0012081.1 MGP_WSBEiJ_G0010211.1 mouse_genomes_project 1 169130605 169131338 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098802.1 MGP_WSBEiJ_G0037465.1 mouse_genomes_project 1 163286787 163286897 - Gm24719 snoRNA snoRNA MGP_WSBEiJ_T0023386.1 MGP_WSBEiJ_G0016320.1 mouse_genomes_project 1 189626520 189670867 - MGP_WSBEiJ_P0023386 Iars2 protein_coding protein_coding MGP_WSBEiJ_T0023387.1 MGP_WSBEiJ_G0016320.1 mouse_genomes_project 1 189627363 189630081 - Iars2 protein_coding processed_transcript MGP_WSBEiJ_T0023388.1 MGP_WSBEiJ_G0016320.1 mouse_genomes_project 1 189636838 189670867 - MGP_WSBEiJ_P0023388 Iars2 protein_coding protein_coding MGP_WSBEiJ_T0023389.1 MGP_WSBEiJ_G0016320.1 mouse_genomes_project 1 189654012 189670867 - MGP_WSBEiJ_P0023389 Iars2 protein_coding protein_coding MGP_WSBEiJ_T0023390.1 MGP_WSBEiJ_G0016320.1 mouse_genomes_project 1 189662657 189670867 - Iars2 protein_coding retained_intron MGP_WSBEiJ_T0019734.1 MGP_WSBEiJ_G0015540.1 mouse_genomes_project 1 70921394 71098410 - MGP_WSBEiJ_P0019734 Abca12 protein_coding protein_coding MGP_WSBEiJ_T0019735.1 MGP_WSBEiJ_G0015540.1 mouse_genomes_project 1 70967820 70984888 - Abca12 protein_coding retained_intron MGP_WSBEiJ_T0019736.1 MGP_WSBEiJ_G0015540.1 mouse_genomes_project 1 70989542 71098410 - Abca12 protein_coding retained_intron MGP_WSBEiJ_T0019737.1 MGP_WSBEiJ_G0015540.1 mouse_genomes_project 1 71012127 71015290 - Abca12 protein_coding retained_intron MGP_WSBEiJ_T0019738.1 MGP_WSBEiJ_G0015540.1 mouse_genomes_project 1 71042297 71098396 - Abca12 protein_coding retained_intron MGP_WSBEiJ_T0020523.1 MGP_WSBEiJ_G0015686.1 mouse_genomes_project 1 88204489 88302055 + MGP_WSBEiJ_P0020523 Dgkd protein_coding protein_coding MGP_WSBEiJ_T0020524.1 MGP_WSBEiJ_G0015686.1 mouse_genomes_project 1 88236225 88272708 + Dgkd protein_coding retained_intron MGP_WSBEiJ_T0020525.1 MGP_WSBEiJ_G0015686.1 mouse_genomes_project 1 88274868 88278943 + Dgkd protein_coding retained_intron MGP_WSBEiJ_T0020526.1 MGP_WSBEiJ_G0015686.1 mouse_genomes_project 1 88288899 88295818 + MGP_WSBEiJ_P0020526 Dgkd protein_coding protein_coding MGP_WSBEiJ_T0020527.1 MGP_WSBEiJ_G0015686.1 mouse_genomes_project 1 88291961 88302745 + MGP_WSBEiJ_P0020527 Dgkd protein_coding protein_coding MGP_WSBEiJ_T0020528.1 MGP_WSBEiJ_G0015686.1 mouse_genomes_project 1 88292847 88297830 + Dgkd protein_coding retained_intron MGP_WSBEiJ_T0020529.1 MGP_WSBEiJ_G0015686.1 mouse_genomes_project 1 88295949 88302743 + MGP_WSBEiJ_P0020529 Dgkd protein_coding protein_coding MGP_WSBEiJ_T0021967.1 MGP_WSBEiJ_G0016001.1 mouse_genomes_project 1 155781342 155852057 - MGP_WSBEiJ_P0021967 Smg7 protein_coding protein_coding MGP_WSBEiJ_T0021968.1 MGP_WSBEiJ_G0016001.1 mouse_genomes_project 1 155781343 155825960 - MGP_WSBEiJ_P0021968 Smg7 protein_coding protein_coding MGP_WSBEiJ_T0021969.1 MGP_WSBEiJ_G0016001.1 mouse_genomes_project 1 155783222 155852081 - MGP_WSBEiJ_P0021969 Smg7 protein_coding protein_coding MGP_WSBEiJ_T0021970.1 MGP_WSBEiJ_G0016001.1 mouse_genomes_project 1 155789610 155818707 - Smg7 protein_coding processed_transcript MGP_WSBEiJ_T0021971.1 MGP_WSBEiJ_G0016001.1 mouse_genomes_project 1 155789632 155793367 - Smg7 protein_coding processed_transcript MGP_WSBEiJ_T0021972.1 MGP_WSBEiJ_G0016001.1 mouse_genomes_project 1 155790274 155793282 - Smg7 protein_coding retained_intron MGP_WSBEiJ_T0022322.1 MGP_WSBEiJ_G0016063.1 mouse_genomes_project 1 165202129 165264041 - MGP_WSBEiJ_P0022322 Suco protein_coding protein_coding MGP_WSBEiJ_T0022323.1 MGP_WSBEiJ_G0016063.1 mouse_genomes_project 1 165206420 165208743 - Suco protein_coding retained_intron MGP_WSBEiJ_T0022324.1 MGP_WSBEiJ_G0016063.1 mouse_genomes_project 1 165214063 165215218 - Suco protein_coding retained_intron MGP_WSBEiJ_T0022325.1 MGP_WSBEiJ_G0016063.1 mouse_genomes_project 1 165221093 165231661 - Suco protein_coding processed_transcript MGP_WSBEiJ_T0022326.1 MGP_WSBEiJ_G0016063.1 mouse_genomes_project 1 165224724 165231221 - Suco protein_coding retained_intron MGP_WSBEiJ_T0022327.1 MGP_WSBEiJ_G0016063.1 mouse_genomes_project 1 165231715 165241182 - MGP_WSBEiJ_P0022327 Suco protein_coding protein_coding MGP_WSBEiJ_T0022328.1 MGP_WSBEiJ_G0016063.1 mouse_genomes_project 1 165240267 165244914 - MGP_WSBEiJ_P0022328 Suco protein_coding protein_coding MGP_WSBEiJ_T0011044.1 MGP_WSBEiJ_G0009201.1 mouse_genomes_project 1 7319147 7319387 + Gm26348 misc_RNA misc_RNA MGP_WSBEiJ_T0098743.1 MGP_WSBEiJ_G0037406.1 mouse_genomes_project 1 33185328 33185451 - Gm25096 snoRNA snoRNA MGP_WSBEiJ_T0022566.1 MGP_WSBEiJ_G0016113.1 mouse_genomes_project 1 169895927 169920935 - MGP_WSBEiJ_P0022566 Pogk protein_coding protein_coding MGP_WSBEiJ_T0022567.1 MGP_WSBEiJ_G0016113.1 mouse_genomes_project 1 169903532 169920544 - MGP_WSBEiJ_P0022567 Pogk protein_coding protein_coding MGP_WSBEiJ_T0022568.1 MGP_WSBEiJ_G0016113.1 mouse_genomes_project 1 169904918 169920981 - MGP_WSBEiJ_P0022568 Pogk protein_coding protein_coding MGP_WSBEiJ_T0022569.1 MGP_WSBEiJ_G0016113.1 mouse_genomes_project 1 169906701 169920940 - MGP_WSBEiJ_P0022569 Pogk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022570.1 MGP_WSBEiJ_G0016113.1 mouse_genomes_project 1 169907473 169921016 - MGP_WSBEiJ_P0022570 Pogk protein_coding protein_coding MGP_WSBEiJ_T0022571.1 MGP_WSBEiJ_G0016113.1 mouse_genomes_project 1 169914514 169920442 - MGP_WSBEiJ_P0022571 Pogk protein_coding protein_coding MGP_WSBEiJ_T0022337.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165370672 165684594 - MGP_WSBEiJ_P0022337 Dnm3 protein_coding protein_coding MGP_WSBEiJ_T0022338.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165370677 165375719 - Dnm3 protein_coding retained_intron MGP_WSBEiJ_T0022339.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165380542 165870346 - MGP_WSBEiJ_P0022339 Dnm3 protein_coding protein_coding MGP_WSBEiJ_T0022340.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165383452 165870346 - MGP_WSBEiJ_P0022340 Dnm3 protein_coding protein_coding MGP_WSBEiJ_T0022341.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165384754 165389252 - Dnm3 protein_coding retained_intron MGP_WSBEiJ_T0022342.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165399102 165684538 - MGP_WSBEiJ_P0022342 Dnm3 protein_coding protein_coding MGP_WSBEiJ_T0022343.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165410280 165518959 - Dnm3 protein_coding retained_intron MGP_WSBEiJ_T0022344.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165660682 165684553 - Dnm3 protein_coding processed_transcript MGP_WSBEiJ_T0022345.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165671482 165703355 - Dnm3 protein_coding processed_transcript MGP_WSBEiJ_T0022346.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165707828 165870324 - Dnm3 protein_coding retained_intron MGP_WSBEiJ_T0022347.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165772875 165816569 - Dnm3 protein_coding processed_transcript MGP_WSBEiJ_T0022348.1 MGP_WSBEiJ_G0016066.1 mouse_genomes_project 1 165796206 165798678 - Dnm3 protein_coding retained_intron MGP_WSBEiJ_T0097238.1 MGP_WSBEiJ_G0035919.1 mouse_genomes_project 1 68654766 68669489 - Gm16076 sense_intronic sense_intronic MGP_WSBEiJ_T0002910.1 MGP_WSBEiJ_G0002739.1 mouse_genomes_project 1 191781845 191816108 - Gm38155 antisense antisense MGP_WSBEiJ_T0000382.1 MGP_WSBEiJ_G0000328.1 mouse_genomes_project 1 22877402 22880507 - TEC TEC MGP_WSBEiJ_T0005881.1 MGP_WSBEiJ_G0004927.1 mouse_genomes_project 1 168094624 168103000 + lincRNA lincRNA MGP_WSBEiJ_T0011897.1 MGP_WSBEiJ_G0010027.1 mouse_genomes_project 1 84335197 84335743 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020132.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75363997 75379847 + MGP_WSBEiJ_P0020132 Stk11ip protein_coding protein_coding MGP_WSBEiJ_T0020133.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75364020 75379438 + MGP_WSBEiJ_P0020133 Stk11ip protein_coding protein_coding MGP_WSBEiJ_T0020134.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75364259 75379441 + Stk11ip protein_coding retained_intron MGP_WSBEiJ_T0020135.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75364279 75369582 + Stk11ip protein_coding retained_intron MGP_WSBEiJ_T0020136.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75370774 75371956 + Stk11ip protein_coding retained_intron MGP_WSBEiJ_T0020137.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75371109 75379441 + Stk11ip protein_coding retained_intron MGP_WSBEiJ_T0020138.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75372146 75374827 + Stk11ip protein_coding retained_intron MGP_WSBEiJ_T0020139.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75375020 75376739 + Stk11ip protein_coding retained_intron MGP_WSBEiJ_T0020140.1 MGP_WSBEiJ_G0015608.1 mouse_genomes_project 1 75375527 75376274 + Stk11ip protein_coding processed_transcript MGP_WSBEiJ_T0100397.1 MGP_WSBEiJ_G0038856.1 mouse_genomes_project 1 78389141 78389402 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005643.1 MGP_WSBEiJ_G0004738.1 mouse_genomes_project 1 50268077 50273412 - Gm17767 lincRNA lincRNA MGP_WSBEiJ_T0005644.1 MGP_WSBEiJ_G0004738.1 mouse_genomes_project 1 50270587 50354847 - Gm17767 lincRNA lincRNA MGP_WSBEiJ_T0022481.1 MGP_WSBEiJ_G0016099.1 mouse_genomes_project 1 168769159 168810283 + MGP_WSBEiJ_P0022481 Gpr161 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022482.1 MGP_WSBEiJ_G0016099.1 mouse_genomes_project 1 168782832 168810379 + MGP_WSBEiJ_P0022482 Gpr161 protein_coding protein_coding MGP_WSBEiJ_T0009324.1 MGP_WSBEiJ_G0007481.1 mouse_genomes_project 1 20749164 20749248 + Mir30c-2 miRNA miRNA MGP_WSBEiJ_T0018763.1 MGP_WSBEiJ_G0015352.1 mouse_genomes_project 1 35560612 35569741 + MGP_WSBEiJ_P0018763 Unc50 protein_coding protein_coding MGP_WSBEiJ_T0018764.1 MGP_WSBEiJ_G0015352.1 mouse_genomes_project 1 35560643 35569881 + MGP_WSBEiJ_P0018764 Unc50 protein_coding protein_coding MGP_WSBEiJ_T0018765.1 MGP_WSBEiJ_G0015352.1 mouse_genomes_project 1 35560650 35568235 + MGP_WSBEiJ_P0018765 Unc50 protein_coding protein_coding MGP_WSBEiJ_T0018766.1 MGP_WSBEiJ_G0015352.1 mouse_genomes_project 1 35560659 35568027 + MGP_WSBEiJ_P0018766 Unc50 protein_coding protein_coding MGP_WSBEiJ_T0018767.1 MGP_WSBEiJ_G0015352.1 mouse_genomes_project 1 35560675 35569744 + MGP_WSBEiJ_P0018767 Unc50 protein_coding protein_coding MGP_WSBEiJ_T0018768.1 MGP_WSBEiJ_G0015352.1 mouse_genomes_project 1 35560681 35562028 + MGP_WSBEiJ_P0018768 Unc50 protein_coding protein_coding MGP_WSBEiJ_T0018769.1 MGP_WSBEiJ_G0015352.1 mouse_genomes_project 1 35561817 35568369 + Unc50 protein_coding retained_intron MGP_WSBEiJ_T0002701.1 MGP_WSBEiJ_G0002575.1 mouse_genomes_project 1 15045097 15115252 - Gm28153 antisense antisense MGP_WSBEiJ_T0018872.1 MGP_WSBEiJ_G0015374.1 mouse_genomes_project 1 37874769 37908849 - MGP_WSBEiJ_P0018872 Creg2 protein_coding protein_coding MGP_WSBEiJ_T0018876.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173575 38303634 + MGP_WSBEiJ_P0018876 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018877.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173575 38303634 + MGP_WSBEiJ_P0018877 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018878.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173832 38175119 + Map4k4 protein_coding retained_intron MGP_WSBEiJ_T0018879.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173832 38266451 + MGP_WSBEiJ_P0018879 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018880.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173841 38302078 + MGP_WSBEiJ_P0018880 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018881.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173841 38302078 + MGP_WSBEiJ_P0018881 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018882.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173842 38302078 + MGP_WSBEiJ_P0018882 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018883.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173886 38302293 + MGP_WSBEiJ_P0018883 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018884.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38173892 38302249 + MGP_WSBEiJ_P0018884 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018885.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38239477 38258413 + Map4k4 protein_coding processed_transcript MGP_WSBEiJ_T0018886.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38240172 38252070 + Map4k4 protein_coding processed_transcript MGP_WSBEiJ_T0018887.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38276848 38277815 + Map4k4 protein_coding retained_intron MGP_WSBEiJ_T0018888.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38277146 38284002 + MGP_WSBEiJ_P0018888 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018889.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38277147 38282164 + MGP_WSBEiJ_P0018889 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018890.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38277930 38287917 + MGP_WSBEiJ_P0018890 Map4k4 protein_coding protein_coding MGP_WSBEiJ_T0018891.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38284652 38286589 + Map4k4 protein_coding retained_intron MGP_WSBEiJ_T0018892.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38291177 38292024 + Map4k4 protein_coding retained_intron MGP_WSBEiJ_T0018893.1 MGP_WSBEiJ_G0015377.1 mouse_genomes_project 1 38300535 38301749 + Map4k4 protein_coding retained_intron MGP_WSBEiJ_T0021144.1 MGP_WSBEiJ_G0015827.1 mouse_genomes_project 1 127262302 127272061 + MGP_WSBEiJ_P0021144 Slc35f5 protein_coding protein_coding MGP_WSBEiJ_T0021145.1 MGP_WSBEiJ_G0015827.1 mouse_genomes_project 1 127262723 127303705 + MGP_WSBEiJ_P0021145 Slc35f5 protein_coding protein_coding MGP_WSBEiJ_T0021146.1 MGP_WSBEiJ_G0015827.1 mouse_genomes_project 1 127291175 127303033 + MGP_WSBEiJ_P0021146 Slc35f5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009387.1 MGP_WSBEiJ_G0007544.1 mouse_genomes_project 1 137737629 137737710 - Mir1231 miRNA miRNA MGP_WSBEiJ_T0019245.1 MGP_WSBEiJ_G0015449.1 mouse_genomes_project 1 54129420 54140720 + MGP_WSBEiJ_P0019245 Mars2 protein_coding protein_coding MGP_WSBEiJ_T0002875.1 MGP_WSBEiJ_G0002710.1 mouse_genomes_project 1 170721899 170730960 + Gm37982 antisense antisense MGP_WSBEiJ_T0021648.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138082111 138087795 + Tnni1 protein_coding processed_transcript MGP_WSBEiJ_T0021649.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138085718 138108384 + MGP_WSBEiJ_P0021649 Tnni1 protein_coding protein_coding MGP_WSBEiJ_T0021650.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138102186 138113782 + MGP_WSBEiJ_P0021650 Tnni1 protein_coding protein_coding MGP_WSBEiJ_T0021651.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138102205 138113423 + Tnni1 protein_coding processed_transcript MGP_WSBEiJ_T0021652.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138102205 138113782 + MGP_WSBEiJ_P0021652 Tnni1 protein_coding protein_coding MGP_WSBEiJ_T0021653.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138102295 138113489 + MGP_WSBEiJ_P0021653 Tnni1 protein_coding protein_coding MGP_WSBEiJ_T0021654.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138102303 138112529 + MGP_WSBEiJ_P0021654 Tnni1 protein_coding protein_coding MGP_WSBEiJ_T0021655.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138102617 138113782 + MGP_WSBEiJ_P0021655 Tnni1 protein_coding protein_coding MGP_WSBEiJ_T0021656.1 MGP_WSBEiJ_G0015940.1 mouse_genomes_project 1 138107818 138112703 + MGP_WSBEiJ_P0021656 Tnni1 protein_coding protein_coding MGP_WSBEiJ_T0021195.1 MGP_WSBEiJ_G0015837.1 mouse_genomes_project 1 129743091 129896304 - MGP_WSBEiJ_P0021195 Zranb3 protein_coding protein_coding MGP_WSBEiJ_T0021196.1 MGP_WSBEiJ_G0015837.1 mouse_genomes_project 1 129743577 129896843 - MGP_WSBEiJ_P0021196 Zranb3 protein_coding protein_coding MGP_WSBEiJ_T0021197.1 MGP_WSBEiJ_G0015837.1 mouse_genomes_project 1 129754681 129762432 - Zranb3 protein_coding processed_transcript MGP_WSBEiJ_T0021198.1 MGP_WSBEiJ_G0015837.1 mouse_genomes_project 1 129776740 129896889 - Zranb3 protein_coding processed_transcript MGP_WSBEiJ_T0021199.1 MGP_WSBEiJ_G0015837.1 mouse_genomes_project 1 129787500 129896305 - Zranb3 protein_coding retained_intron MGP_WSBEiJ_T0021200.1 MGP_WSBEiJ_G0015837.1 mouse_genomes_project 1 129787888 129810213 - Zranb3 protein_coding processed_transcript MGP_WSBEiJ_T0021201.1 MGP_WSBEiJ_G0015837.1 mouse_genomes_project 1 129849456 129896296 - Zranb3 protein_coding retained_intron MGP_WSBEiJ_T0000387.1 MGP_WSBEiJ_G0000333.1 mouse_genomes_project 1 23213194 23219309 - TEC TEC MGP_WSBEiJ_T0002776.1 MGP_WSBEiJ_G0002632.1 mouse_genomes_project 1 82497810 82500652 - antisense antisense MGP_WSBEiJ_T0019383.1 MGP_WSBEiJ_G0015475.1 mouse_genomes_project 1 58067275 58075656 + Stradb protein_coding retained_intron MGP_WSBEiJ_T0019384.1 MGP_WSBEiJ_G0015475.1 mouse_genomes_project 1 58067275 58082033 + Stradb protein_coding retained_intron MGP_WSBEiJ_T0019385.1 MGP_WSBEiJ_G0015475.1 mouse_genomes_project 1 58067275 58085702 + MGP_WSBEiJ_P0019385 Stradb protein_coding protein_coding MGP_WSBEiJ_T0019386.1 MGP_WSBEiJ_G0015475.1 mouse_genomes_project 1 58067275 58089859 + MGP_WSBEiJ_P0019386 Stradb protein_coding protein_coding MGP_WSBEiJ_T0019387.1 MGP_WSBEiJ_G0015475.1 mouse_genomes_project 1 58067275 58089266 + MGP_WSBEiJ_P0019387 Stradb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019388.1 MGP_WSBEiJ_G0015475.1 mouse_genomes_project 1 58067275 58089141 + MGP_WSBEiJ_P0019388 Stradb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019389.1 MGP_WSBEiJ_G0015475.1 mouse_genomes_project 1 58085216 58088503 + MGP_WSBEiJ_P0019389 Stradb protein_coding protein_coding MGP_WSBEiJ_T0011859.1 MGP_WSBEiJ_G0009989.1 mouse_genomes_project 1 64934207 64934491 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000341.1 MGP_WSBEiJ_G0000289.1 mouse_genomes_project 1 6382381 6385652 + TEC TEC MGP_WSBEiJ_T0002756.1 MGP_WSBEiJ_G0002620.1 mouse_genomes_project 1 65738144 65745367 - Gm10558 antisense antisense MGP_WSBEiJ_T0023092.1 MGP_WSBEiJ_G0016259.1 mouse_genomes_project 1 182402524 182417217 - MGP_WSBEiJ_P0023092 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023093.1 MGP_WSBEiJ_G0016259.1 mouse_genomes_project 1 182402584 182410049 - MGP_WSBEiJ_P0023093 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023094.1 MGP_WSBEiJ_G0016259.1 mouse_genomes_project 1 182403070 182408834 - MGP_WSBEiJ_P0023094 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023377.1 MGP_WSBEiJ_G0016317.1 mouse_genomes_project 1 189196827 189209176 - MGP_WSBEiJ_P0023377 C130074G19Rik protein_coding protein_coding MGP_WSBEiJ_T0019691.1 MGP_WSBEiJ_G0015531.1 mouse_genomes_project 1 66248535 66280349 - MGP_WSBEiJ_P0019691 Acadl protein_coding protein_coding MGP_WSBEiJ_T0019692.1 MGP_WSBEiJ_G0015531.1 mouse_genomes_project 1 66261710 66275427 - Acadl protein_coding processed_transcript MGP_WSBEiJ_T0012064.1 MGP_WSBEiJ_G0010194.1 mouse_genomes_project 1 160806362 160806560 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100420.1 MGP_WSBEiJ_G0038879.1 mouse_genomes_project 1 132631238 132644721 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0022178.1 MGP_WSBEiJ_G0016039.1 mouse_genomes_project 1 160293463 160590028 - MGP_WSBEiJ_P0022178 Rasal2 protein_coding protein_coding MGP_WSBEiJ_T0022179.1 MGP_WSBEiJ_G0016039.1 mouse_genomes_project 1 160299666 160589367 - MGP_WSBEiJ_P0022179 Rasal2 protein_coding protein_coding MGP_WSBEiJ_T0022180.1 MGP_WSBEiJ_G0016039.1 mouse_genomes_project 1 160338168 160411521 - MGP_WSBEiJ_P0022180 Rasal2 protein_coding protein_coding MGP_WSBEiJ_T0022181.1 MGP_WSBEiJ_G0016039.1 mouse_genomes_project 1 160338361 160423904 - MGP_WSBEiJ_P0022181 Rasal2 protein_coding protein_coding MGP_WSBEiJ_T0022182.1 MGP_WSBEiJ_G0016039.1 mouse_genomes_project 1 160341276 160343619 - Rasal2 protein_coding processed_transcript MGP_WSBEiJ_T0022183.1 MGP_WSBEiJ_G0016039.1 mouse_genomes_project 1 160341276 160397379 - MGP_WSBEiJ_P0022183 Rasal2 protein_coding protein_coding MGP_WSBEiJ_T0022184.1 MGP_WSBEiJ_G0016039.1 mouse_genomes_project 1 160451586 160590028 - Rasal2 protein_coding retained_intron MGP_WSBEiJ_T0018850.1 MGP_WSBEiJ_G0015368.1 mouse_genomes_project 1 37199205 37207042 + MGP_WSBEiJ_P0018850 Pdcl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018851.1 MGP_WSBEiJ_G0015368.1 mouse_genomes_project 1 37199208 37208408 + MGP_WSBEiJ_P0018851 Pdcl3 protein_coding protein_coding MGP_WSBEiJ_T0018852.1 MGP_WSBEiJ_G0015368.1 mouse_genomes_project 1 37207284 37208771 + Pdcl3 protein_coding retained_intron MGP_WSBEiJ_T0005835.1 MGP_WSBEiJ_G0004891.1 mouse_genomes_project 1 140325853 140329476 - Gm26979 lincRNA lincRNA MGP_WSBEiJ_T0012073.1 MGP_WSBEiJ_G0010203.1 mouse_genomes_project 1 165207882 165209086 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005818.1 MGP_WSBEiJ_G0004877.1 mouse_genomes_project 1 135740969 135744979 + Gm26706 lincRNA lincRNA MGP_WSBEiJ_T0002798.1 MGP_WSBEiJ_G0002652.1 mouse_genomes_project 1 106468432 106474031 + Gm17634 antisense antisense MGP_WSBEiJ_T0002799.1 MGP_WSBEiJ_G0002652.1 mouse_genomes_project 1 106469186 106474183 + Gm17634 antisense antisense MGP_WSBEiJ_T0002800.1 MGP_WSBEiJ_G0002652.1 mouse_genomes_project 1 106469572 106469936 + Gm17634 antisense antisense MGP_WSBEiJ_T0020977.1 MGP_WSBEiJ_G0015794.1 mouse_genomes_project 1 108740660 108759094 + MGP_WSBEiJ_P0020977 Serpinb2 protein_coding protein_coding MGP_WSBEiJ_T0020978.1 MGP_WSBEiJ_G0015794.1 mouse_genomes_project 1 108740734 108759088 + MGP_WSBEiJ_P0020978 Serpinb2 protein_coding protein_coding MGP_WSBEiJ_T0020979.1 MGP_WSBEiJ_G0015794.1 mouse_genomes_project 1 108753838 108768591 + MGP_WSBEiJ_P0020979 Serpinb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020980.1 MGP_WSBEiJ_G0015794.1 mouse_genomes_project 1 108755552 108765646 + MGP_WSBEiJ_P0020980 Serpinb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019788.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73721920 73949990 - MGP_WSBEiJ_P0019788 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019789.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73721921 73915729 - MGP_WSBEiJ_P0019789 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019790.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73721921 73949992 - MGP_WSBEiJ_P0019790 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019791.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73725598 73740205 - MGP_WSBEiJ_P0019791 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019792.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73725782 73811711 - MGP_WSBEiJ_P0019792 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019793.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73725806 73811711 - MGP_WSBEiJ_P0019793 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019794.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73736804 73752695 - MGP_WSBEiJ_P0019794 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019795.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73737091 73739909 - Tns1 protein_coding retained_intron MGP_WSBEiJ_T0019796.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73737091 73742496 - Tns1 protein_coding processed_transcript MGP_WSBEiJ_T0019797.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73737304 73742190 - Tns1 protein_coding processed_transcript MGP_WSBEiJ_T0019798.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73765049 73777176 - MGP_WSBEiJ_P0019798 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019799.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73796928 73803330 - Tns1 protein_coding retained_intron MGP_WSBEiJ_T0019800.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73806019 73814709 - Tns1 protein_coding retained_intron MGP_WSBEiJ_T0019801.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73806673 73835650 - Tns1 protein_coding processed_transcript MGP_WSBEiJ_T0019802.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73808399 73814709 - Tns1 protein_coding processed_transcript MGP_WSBEiJ_T0019803.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73808504 73817817 - MGP_WSBEiJ_P0019803 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019804.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73809463 73858484 - MGP_WSBEiJ_P0019804 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019805.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73811138 73814037 - Tns1 protein_coding retained_intron MGP_WSBEiJ_T0019806.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73811626 73921220 - MGP_WSBEiJ_P0019806 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019807.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73813396 73921263 - MGP_WSBEiJ_P0019807 Tns1 protein_coding protein_coding MGP_WSBEiJ_T0019808.1 MGP_WSBEiJ_G0015554.1 mouse_genomes_project 1 73818552 73858508 - Tns1 protein_coding processed_transcript MGP_WSBEiJ_T0011931.1 MGP_WSBEiJ_G0010061.1 mouse_genomes_project 1 103493157 103493424 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096873.1 MGP_WSBEiJ_G0035554.1 mouse_genomes_project 1 24533143 24533262 - n-R5s209 rRNA rRNA MGP_WSBEiJ_T0098809.1 MGP_WSBEiJ_G0037472.1 mouse_genomes_project 1 164397690 164397756 + Snord78 snoRNA snoRNA MGP_WSBEiJ_T0011807.1 MGP_WSBEiJ_G0009937.1 mouse_genomes_project 1 51297152 51297615 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023140.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184116277 184333481 + MGP_WSBEiJ_P0023140 Cdc42bpa protein_coding protein_coding MGP_WSBEiJ_T0023141.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184116390 184335928 + MGP_WSBEiJ_P0023141 Cdc42bpa protein_coding protein_coding MGP_WSBEiJ_T0023142.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184116565 184278678 + MGP_WSBEiJ_P0023142 Cdc42bpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023143.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184116915 184332491 + MGP_WSBEiJ_P0023143 Cdc42bpa protein_coding unknown_likely_coding MGP_WSBEiJ_T0023144.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184116915 184332491 + MGP_WSBEiJ_P0023144 Cdc42bpa protein_coding protein_coding MGP_WSBEiJ_T0023145.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184116915 184332491 + MGP_WSBEiJ_P0023145 Cdc42bpa protein_coding protein_coding MGP_WSBEiJ_T0023146.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184133178 184201449 + Cdc42bpa protein_coding processed_transcript MGP_WSBEiJ_T0023147.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184148418 184197109 + Cdc42bpa protein_coding retained_intron MGP_WSBEiJ_T0023148.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184248444 184260803 + Cdc42bpa protein_coding retained_intron MGP_WSBEiJ_T0023149.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184267100 184332913 + MGP_WSBEiJ_P0023149 Cdc42bpa protein_coding protein_coding MGP_WSBEiJ_T0023150.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184272973 184285745 + Cdc42bpa protein_coding retained_intron MGP_WSBEiJ_T0023151.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184274952 184278953 + Cdc42bpa protein_coding retained_intron MGP_WSBEiJ_T0023152.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184275152 184335927 + MGP_WSBEiJ_P0023152 Cdc42bpa protein_coding protein_coding MGP_WSBEiJ_T0023153.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184275225 184319487 + MGP_WSBEiJ_P0023153 Cdc42bpa protein_coding protein_coding MGP_WSBEiJ_T0023154.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184278125 184306585 + MGP_WSBEiJ_P0023154 Cdc42bpa protein_coding protein_coding MGP_WSBEiJ_T0023155.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184278143 184283094 + Cdc42bpa protein_coding retained_intron MGP_WSBEiJ_T0023156.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184293105 184308413 + Cdc42bpa protein_coding processed_transcript MGP_WSBEiJ_T0023157.1 MGP_WSBEiJ_G0016271.1 mouse_genomes_project 1 184331315 184332619 + Cdc42bpa protein_coding retained_intron MGP_WSBEiJ_T0020699.1 MGP_WSBEiJ_G0015726.1 mouse_genomes_project 1 93238856 93240603 - MGP_WSBEiJ_P0020699 Olfr1415 protein_coding protein_coding MGP_WSBEiJ_T0097556.1 MGP_WSBEiJ_G0036219.1 mouse_genomes_project 1 87754618 87754713 - Gm23504 snRNA snRNA MGP_WSBEiJ_T0000578.1 MGP_WSBEiJ_G0000523.1 mouse_genomes_project 1 128066579 128067615 - TEC TEC MGP_WSBEiJ_T0020051.1 MGP_WSBEiJ_G0015597.1 mouse_genomes_project 1 75081797 75099283 - MGP_WSBEiJ_P0020051 protein_coding unknown_likely_coding MGP_WSBEiJ_T0020052.1 MGP_WSBEiJ_G0015597.1 mouse_genomes_project 1 75091432 75092572 - protein_coding retained_intron MGP_WSBEiJ_T0020053.1 MGP_WSBEiJ_G0015597.1 mouse_genomes_project 1 75093065 75098573 - MGP_WSBEiJ_P0020053 protein_coding protein_coding MGP_WSBEiJ_T0020054.1 MGP_WSBEiJ_G0015597.1 mouse_genomes_project 1 75093065 75098489 - MGP_WSBEiJ_P0020054 protein_coding protein_coding MGP_WSBEiJ_T0020055.1 MGP_WSBEiJ_G0015597.1 mouse_genomes_project 1 75093133 75099034 - MGP_WSBEiJ_P0020055 protein_coding protein_coding MGP_WSBEiJ_T0020056.1 MGP_WSBEiJ_G0015597.1 mouse_genomes_project 1 75093157 75098740 - protein_coding processed_transcript MGP_WSBEiJ_T0009391.1 MGP_WSBEiJ_G0007548.1 mouse_genomes_project 1 152897485 152897597 - Gm44329 miRNA miRNA MGP_WSBEiJ_T0019968.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000506 75003486 + Zfand2b protein_coding retained_intron MGP_WSBEiJ_T0019969.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000506 75003490 + MGP_WSBEiJ_P0019969 Zfand2b protein_coding protein_coding MGP_WSBEiJ_T0019970.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000506 75002613 + MGP_WSBEiJ_P0019970 Zfand2b protein_coding protein_coding MGP_WSBEiJ_T0019971.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000515 75003486 + MGP_WSBEiJ_P0019971 Zfand2b protein_coding protein_coding MGP_WSBEiJ_T0019972.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000518 75001753 + Zfand2b protein_coding retained_intron MGP_WSBEiJ_T0019973.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000526 75001492 + Zfand2b protein_coding retained_intron MGP_WSBEiJ_T0019974.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000561 75002430 + Zfand2b protein_coding retained_intron MGP_WSBEiJ_T0019975.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000638 75002548 + Zfand2b protein_coding retained_intron MGP_WSBEiJ_T0019976.1 MGP_WSBEiJ_G0015588.1 mouse_genomes_project 1 75000788 75003263 + MGP_WSBEiJ_P0019976 Zfand2b protein_coding protein_coding MGP_WSBEiJ_T0005635.1 MGP_WSBEiJ_G0004731.1 mouse_genomes_project 1 45762633 45798534 + Gm28826 lincRNA lincRNA MGP_WSBEiJ_T0019681.1 MGP_WSBEiJ_G0015529.1 mouse_genomes_project 1 66117451 66135400 + MGP_WSBEiJ_P0019681 Rpe protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019682.1 MGP_WSBEiJ_G0015529.1 mouse_genomes_project 1 66117451 66131445 + MGP_WSBEiJ_P0019682 Rpe protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019683.1 MGP_WSBEiJ_G0015529.1 mouse_genomes_project 1 66117451 66135400 + MGP_WSBEiJ_P0019683 Rpe protein_coding protein_coding MGP_WSBEiJ_T0019684.1 MGP_WSBEiJ_G0015529.1 mouse_genomes_project 1 66117451 66135400 + MGP_WSBEiJ_P0019684 Rpe protein_coding protein_coding MGP_WSBEiJ_T0019685.1 MGP_WSBEiJ_G0015529.1 mouse_genomes_project 1 66117527 66133893 + MGP_WSBEiJ_P0019685 Rpe protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098816.1 MGP_WSBEiJ_G0037479.1 mouse_genomes_project 1 166521200 166521329 + snoRNA snoRNA MGP_WSBEiJ_T0022305.1 MGP_WSBEiJ_G0016058.1 mouse_genomes_project 1 164508053 164527213 + MGP_WSBEiJ_P0022305 Ankrd45 protein_coding protein_coding MGP_WSBEiJ_T0022306.1 MGP_WSBEiJ_G0016058.1 mouse_genomes_project 1 164508074 164534332 + MGP_WSBEiJ_P0022306 Ankrd45 protein_coding protein_coding MGP_WSBEiJ_T0022307.1 MGP_WSBEiJ_G0016058.1 mouse_genomes_project 1 164508085 164531673 + MGP_WSBEiJ_P0022307 Ankrd45 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022308.1 MGP_WSBEiJ_G0016058.1 mouse_genomes_project 1 164508102 164528132 + MGP_WSBEiJ_P0022308 Ankrd45 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009361.1 MGP_WSBEiJ_G0007518.1 mouse_genomes_project 1 82959357 82959410 + Gm22396 miRNA miRNA MGP_WSBEiJ_T0097559.1 MGP_WSBEiJ_G0036222.1 mouse_genomes_project 1 98970177 98970284 + Gm24465 snRNA snRNA MGP_WSBEiJ_T0000638.1 MGP_WSBEiJ_G0000581.1 mouse_genomes_project 1 147959973 147963607 - TEC TEC MGP_WSBEiJ_T0021425.1 MGP_WSBEiJ_G0015888.1 mouse_genomes_project 1 134950086 135009693 + MGP_WSBEiJ_P0021425 Lrrn2 protein_coding protein_coding MGP_WSBEiJ_T0021426.1 MGP_WSBEiJ_G0015888.1 mouse_genomes_project 1 134950168 135006838 + Lrrn2 protein_coding processed_transcript MGP_WSBEiJ_T0011875.1 MGP_WSBEiJ_G0010005.1 mouse_genomes_project 1 73327317 73328313 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020725.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93649085 93659176 + MGP_WSBEiJ_P0020725 Rnpepl1 protein_coding protein_coding MGP_WSBEiJ_T0020726.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93649127 93658907 + Rnpepl1 protein_coding retained_intron MGP_WSBEiJ_T0020727.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93649155 93651718 + Rnpepl1 protein_coding retained_intron MGP_WSBEiJ_T0020728.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93649429 93655072 + MGP_WSBEiJ_P0020728 Rnpepl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020729.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93649517 93654268 + MGP_WSBEiJ_P0020729 Rnpepl1 protein_coding protein_coding MGP_WSBEiJ_T0020730.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93654178 93658907 + Rnpepl1 protein_coding retained_intron MGP_WSBEiJ_T0020731.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93655125 93658907 + MGP_WSBEiJ_P0020731 Rnpepl1 protein_coding protein_coding MGP_WSBEiJ_T0020732.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93655139 93657551 + Rnpepl1 protein_coding retained_intron MGP_WSBEiJ_T0020733.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93655346 93656408 + Rnpepl1 protein_coding retained_intron MGP_WSBEiJ_T0020734.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93655481 93657400 + MGP_WSBEiJ_P0020734 Rnpepl1 protein_coding protein_coding MGP_WSBEiJ_T0020735.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93655750 93657552 + Rnpepl1 protein_coding retained_intron MGP_WSBEiJ_T0020736.1 MGP_WSBEiJ_G0015738.1 mouse_genomes_project 1 93657948 93662718 + MGP_WSBEiJ_P0020736 Rnpepl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000566.1 MGP_WSBEiJ_G0000511.1 mouse_genomes_project 1 124430888 124434459 + TEC TEC MGP_WSBEiJ_T0100393.1 MGP_WSBEiJ_G0038852.1 mouse_genomes_project 1 64789274 64789547 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011687.1 MGP_WSBEiJ_G0009817.1 mouse_genomes_project 1 13000835 13001382 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021149.1 MGP_WSBEiJ_G0015829.1 mouse_genomes_project 1 127590955 127635453 - MGP_WSBEiJ_P0021149 Lypd1 protein_coding protein_coding MGP_WSBEiJ_T0021150.1 MGP_WSBEiJ_G0015829.1 mouse_genomes_project 1 127595625 127634626 - MGP_WSBEiJ_P0021150 Lypd1 protein_coding protein_coding MGP_WSBEiJ_T0021151.1 MGP_WSBEiJ_G0015829.1 mouse_genomes_project 1 127595659 127636158 - MGP_WSBEiJ_P0021151 Lypd1 protein_coding protein_coding MGP_WSBEiJ_T0021152.1 MGP_WSBEiJ_G0015829.1 mouse_genomes_project 1 127596442 127634142 - MGP_WSBEiJ_P0021152 Lypd1 protein_coding protein_coding MGP_WSBEiJ_T0021153.1 MGP_WSBEiJ_G0015829.1 mouse_genomes_project 1 127596860 127636331 - MGP_WSBEiJ_P0021153 Lypd1 protein_coding protein_coding MGP_WSBEiJ_T0022689.1 MGP_WSBEiJ_G0016149.1 mouse_genomes_project 1 174776948 174803027 - MGP_WSBEiJ_P0022689 Sdhc protein_coding protein_coding MGP_WSBEiJ_T0022690.1 MGP_WSBEiJ_G0016149.1 mouse_genomes_project 1 174779194 174803015 - MGP_WSBEiJ_P0022690 Sdhc protein_coding protein_coding MGP_WSBEiJ_T0022691.1 MGP_WSBEiJ_G0016149.1 mouse_genomes_project 1 174789973 174803012 - MGP_WSBEiJ_P0022691 Sdhc protein_coding protein_coding MGP_WSBEiJ_T0000713.1 MGP_WSBEiJ_G0000656.1 mouse_genomes_project 1 179324674 179326484 - TEC TEC MGP_WSBEiJ_T0005795.1 MGP_WSBEiJ_G0004858.1 mouse_genomes_project 1 122251926 122257048 + Gm29346 lincRNA lincRNA MGP_WSBEiJ_T0019167.1 MGP_WSBEiJ_G0015433.1 mouse_genomes_project 1 52087544 52114180 + MGP_WSBEiJ_P0019167 Gm28778 protein_coding protein_coding MGP_WSBEiJ_T0021605.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137539163 137560267 - MGP_WSBEiJ_P0021605 Rnpep protein_coding protein_coding MGP_WSBEiJ_T0021606.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137539163 137560267 - MGP_WSBEiJ_P0021606 Rnpep protein_coding protein_coding MGP_WSBEiJ_T0021607.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137541656 137543900 - Rnpep protein_coding retained_intron MGP_WSBEiJ_T0021608.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137543493 137547939 - Rnpep protein_coding processed_transcript MGP_WSBEiJ_T0021609.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137547850 137550966 - Rnpep protein_coding processed_transcript MGP_WSBEiJ_T0021610.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137547852 137549234 - Rnpep protein_coding retained_intron MGP_WSBEiJ_T0021611.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137552090 137553605 - Rnpep protein_coding retained_intron MGP_WSBEiJ_T0021612.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137553535 137555301 - Rnpep protein_coding retained_intron MGP_WSBEiJ_T0021613.1 MGP_WSBEiJ_G0015932.1 mouse_genomes_project 1 137553831 137556104 - Rnpep protein_coding retained_intron MGP_WSBEiJ_T0005604.1 MGP_WSBEiJ_G0004714.1 mouse_genomes_project 1 34822749 34829378 - Gm33533 lincRNA lincRNA MGP_WSBEiJ_T0000340.1 MGP_WSBEiJ_G0000288.1 mouse_genomes_project 1 6289849 6290897 - TEC TEC MGP_WSBEiJ_T0005763.1 MGP_WSBEiJ_G0004834.1 mouse_genomes_project 1 97475205 97537607 - 4930533P14Rik lincRNA lincRNA MGP_WSBEiJ_T0023568.1 MGP_WSBEiJ_G0016357.1 mouse_genomes_project 1 196695285 196696699 - Traf5 protein_coding retained_intron MGP_WSBEiJ_T0023569.1 MGP_WSBEiJ_G0016357.1 mouse_genomes_project 1 196695285 196698047 - MGP_WSBEiJ_P0023569 Traf5 protein_coding protein_coding MGP_WSBEiJ_T0023570.1 MGP_WSBEiJ_G0016357.1 mouse_genomes_project 1 196695510 196723638 - MGP_WSBEiJ_P0023570 Traf5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023571.1 MGP_WSBEiJ_G0016357.1 mouse_genomes_project 1 196695510 196746229 - MGP_WSBEiJ_P0023571 Traf5 protein_coding protein_coding MGP_WSBEiJ_T0023572.1 MGP_WSBEiJ_G0016357.1 mouse_genomes_project 1 196704875 196709782 - MGP_WSBEiJ_P0023572 Traf5 protein_coding protein_coding MGP_WSBEiJ_T0023573.1 MGP_WSBEiJ_G0016357.1 mouse_genomes_project 1 196705902 196709782 - Traf5 protein_coding retained_intron MGP_WSBEiJ_T0022786.1 MGP_WSBEiJ_G0016165.1 mouse_genomes_project 1 175015692 175018041 - MGP_WSBEiJ_P0022786 Klhdc9 protein_coding protein_coding MGP_WSBEiJ_T0002909.1 MGP_WSBEiJ_G0002738.1 mouse_genomes_project 1 191546389 191549104 + 1700007P06Rik antisense antisense MGP_WSBEiJ_T0005614.1 MGP_WSBEiJ_G0004721.1 mouse_genomes_project 1 40667858 40669241 + Gm9915 lincRNA lincRNA MGP_WSBEiJ_T0005615.1 MGP_WSBEiJ_G0004721.1 mouse_genomes_project 1 40667859 40669241 + Gm9915 lincRNA lincRNA MGP_WSBEiJ_T0097600.1 MGP_WSBEiJ_G0036263.1 mouse_genomes_project 1 182736597 182736764 + Gm24405 snRNA snRNA MGP_WSBEiJ_T0009340.1 MGP_WSBEiJ_G0007497.1 mouse_genomes_project 1 47728757 47729240 + Gm22693 miRNA miRNA MGP_WSBEiJ_T0009398.1 MGP_WSBEiJ_G0007555.1 mouse_genomes_project 1 165609207 165609317 + Mir199a-2 miRNA miRNA MGP_WSBEiJ_T0012138.1 MGP_WSBEiJ_G0010268.1 mouse_genomes_project 1 198177566 198179099 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005781.1 MGP_WSBEiJ_G0004847.1 mouse_genomes_project 1 112674490 112747207 - Gm29088 lincRNA lincRNA MGP_WSBEiJ_T0000343.1 MGP_WSBEiJ_G0000291.1 mouse_genomes_project 1 7206859 7207779 - TEC TEC MGP_WSBEiJ_T0011706.1 MGP_WSBEiJ_G0009836.1 mouse_genomes_project 1 18301896 18303100 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000760.1 MGP_WSBEiJ_G0000701.1 mouse_genomes_project 1 193579194 193580733 + TEC TEC MGP_WSBEiJ_T0096752.1 MGP_WSBEiJ_G0035433.1 mouse_genomes_project 1 168059259 168060346 - pseudogene pseudogene MGP_WSBEiJ_T0000537.1 MGP_WSBEiJ_G0000482.1 mouse_genomes_project 1 92679321 92684893 + TEC TEC MGP_WSBEiJ_T0019818.1 MGP_WSBEiJ_G0015559.1 mouse_genomes_project 1 74118632 74119707 + MGP_WSBEiJ_P0019818 Gpbar1 protein_coding protein_coding MGP_WSBEiJ_T0022974.1 MGP_WSBEiJ_G0016220.1 mouse_genomes_project 1 177625937 177635375 - MGP_WSBEiJ_P0022974 protein_coding protein_coding MGP_WSBEiJ_T0022975.1 MGP_WSBEiJ_G0016220.1 mouse_genomes_project 1 177626078 177636175 - protein_coding processed_transcript MGP_WSBEiJ_T0022976.1 MGP_WSBEiJ_G0016220.1 mouse_genomes_project 1 177626104 177635451 - protein_coding processed_transcript MGP_WSBEiJ_T0022978.1 MGP_WSBEiJ_G0016220.1 mouse_genomes_project 1 177628548 177635472 - protein_coding retained_intron MGP_WSBEiJ_T0019599.1 MGP_WSBEiJ_G0015512.1 mouse_genomes_project 1 64027548 64065251 + MGP_WSBEiJ_P0019599 Ccnyl1 protein_coding protein_coding MGP_WSBEiJ_T0019600.1 MGP_WSBEiJ_G0015512.1 mouse_genomes_project 1 64027915 64063553 + MGP_WSBEiJ_P0019600 Ccnyl1 protein_coding protein_coding MGP_WSBEiJ_T0019601.1 MGP_WSBEiJ_G0015512.1 mouse_genomes_project 1 64029735 64050503 + MGP_WSBEiJ_P0019601 Ccnyl1 protein_coding protein_coding MGP_WSBEiJ_T0019602.1 MGP_WSBEiJ_G0015512.1 mouse_genomes_project 1 64029897 64065247 + MGP_WSBEiJ_P0019602 Ccnyl1 protein_coding protein_coding MGP_WSBEiJ_T0011984.1 MGP_WSBEiJ_G0010114.1 mouse_genomes_project 1 123042945 123043410 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018430.1 MGP_WSBEiJ_G0015288.1 mouse_genomes_project 1 18243843 18293979 + MGP_WSBEiJ_P0018430 Paqr8 protein_coding protein_coding MGP_WSBEiJ_T0018431.1 MGP_WSBEiJ_G0015288.1 mouse_genomes_project 1 18272024 18293384 + MGP_WSBEiJ_P0018431 Paqr8 protein_coding protein_coding MGP_WSBEiJ_T0018432.1 MGP_WSBEiJ_G0015288.1 mouse_genomes_project 1 18272058 18290078 + MGP_WSBEiJ_P0018432 Paqr8 protein_coding protein_coding MGP_WSBEiJ_T0018433.1 MGP_WSBEiJ_G0015288.1 mouse_genomes_project 1 18277075 18290085 + MGP_WSBEiJ_P0018433 Paqr8 protein_coding protein_coding MGP_WSBEiJ_T0011658.1 MGP_WSBEiJ_G0009788.1 mouse_genomes_project 1 3949029 3949691 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097529.1 MGP_WSBEiJ_G0036192.1 mouse_genomes_project 1 31120204 31120314 + Gm24901 snRNA snRNA MGP_WSBEiJ_T0011996.1 MGP_WSBEiJ_G0010126.1 mouse_genomes_project 1 127378193 127378822 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022741.1 MGP_WSBEiJ_G0016159.1 mouse_genomes_project 1 174932426 174937596 - Ppox protein_coding retained_intron MGP_WSBEiJ_T0022742.1 MGP_WSBEiJ_G0016159.1 mouse_genomes_project 1 174933397 174937596 - Ppox protein_coding retained_intron MGP_WSBEiJ_T0022743.1 MGP_WSBEiJ_G0016159.1 mouse_genomes_project 1 174933397 174937596 - MGP_WSBEiJ_P0022743 Ppox protein_coding protein_coding MGP_WSBEiJ_T0022744.1 MGP_WSBEiJ_G0016159.1 mouse_genomes_project 1 174933852 174937169 - MGP_WSBEiJ_P0022744 Ppox protein_coding protein_coding MGP_WSBEiJ_T0022745.1 MGP_WSBEiJ_G0016159.1 mouse_genomes_project 1 174934540 174936236 - Ppox protein_coding retained_intron MGP_WSBEiJ_T0022746.1 MGP_WSBEiJ_G0016159.1 mouse_genomes_project 1 174936270 174936931 - Ppox protein_coding processed_transcript MGP_WSBEiJ_T0022747.1 MGP_WSBEiJ_G0016159.1 mouse_genomes_project 1 174936517 174937596 - Ppox protein_coding retained_intron MGP_WSBEiJ_T0022748.1 MGP_WSBEiJ_G0016159.1 mouse_genomes_project 1 174936773 174937529 - Ppox protein_coding retained_intron MGP_WSBEiJ_T0022530.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169370982 169442309 - MGP_WSBEiJ_P0022530 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022531.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169370982 169509784 - MGP_WSBEiJ_P0022531 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022532.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169377999 169438379 - MGP_WSBEiJ_P0022532 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022533.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169381750 169419974 - MGP_WSBEiJ_P0022533 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022534.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169381784 169509728 - MGP_WSBEiJ_P0022534 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022535.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169381784 169509724 - MGP_WSBEiJ_P0022535 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022536.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169381788 169442309 - MGP_WSBEiJ_P0022536 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022537.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169381814 169386486 - MGP_WSBEiJ_P0022537 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022538.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169381910 169397680 - Pou2f1 protein_coding retained_intron MGP_WSBEiJ_T0022539.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169381934 169509735 - MGP_WSBEiJ_P0022539 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022540.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169382008 169442261 - MGP_WSBEiJ_P0022540 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022541.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169386252 169442372 - Pou2f1 protein_coding retained_intron MGP_WSBEiJ_T0022542.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169386407 169442300 - Pou2f1 protein_coding retained_intron MGP_WSBEiJ_T0022543.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169396651 169509721 - Pou2f1 protein_coding retained_intron MGP_WSBEiJ_T0022544.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169418013 169509719 - MGP_WSBEiJ_P0022544 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0022545.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169436277 169509735 - Pou2f1 protein_coding retained_intron MGP_WSBEiJ_T0022546.1 MGP_WSBEiJ_G0016107.1 mouse_genomes_project 1 169438358 169509715 - MGP_WSBEiJ_P0022546 Pou2f1 protein_coding protein_coding MGP_WSBEiJ_T0000606.1 MGP_WSBEiJ_G0000550.1 mouse_genomes_project 1 136265612 136268367 - TEC TEC MGP_WSBEiJ_T0097601.1 MGP_WSBEiJ_G0036264.1 mouse_genomes_project 1 185032558 185032666 + Gm24836 snRNA snRNA MGP_WSBEiJ_T0005585.1 MGP_WSBEiJ_G0004697.1 mouse_genomes_project 1 22527611 22528263 - Gm29414 lincRNA lincRNA MGP_WSBEiJ_T0021438.1 MGP_WSBEiJ_G0015890.1 mouse_genomes_project 1 135122430 135144039 + MGP_WSBEiJ_P0021438 Pik3c2b protein_coding protein_coding MGP_WSBEiJ_T0021439.1 MGP_WSBEiJ_G0015890.1 mouse_genomes_project 1 135122775 135144843 + Pik3c2b protein_coding retained_intron MGP_WSBEiJ_T0021440.1 MGP_WSBEiJ_G0015890.1 mouse_genomes_project 1 135122775 135158079 + Pik3c2b protein_coding retained_intron MGP_WSBEiJ_T0021441.1 MGP_WSBEiJ_G0015890.1 mouse_genomes_project 1 135122775 135188063 + MGP_WSBEiJ_P0021441 Pik3c2b protein_coding protein_coding MGP_WSBEiJ_T0009389.1 MGP_WSBEiJ_G0007546.1 mouse_genomes_project 1 140377790 140377870 + Mir181b-1 miRNA miRNA MGP_WSBEiJ_T0097587.1 MGP_WSBEiJ_G0036250.1 mouse_genomes_project 1 169313845 169313952 - Gm23402 snRNA snRNA MGP_WSBEiJ_T0002919.1 MGP_WSBEiJ_G0002747.1 mouse_genomes_project 1 195650253 195651090 + A230020J21Rik antisense antisense MGP_WSBEiJ_T0002920.1 MGP_WSBEiJ_G0002747.1 mouse_genomes_project 1 195650254 195654682 + A230020J21Rik antisense antisense MGP_WSBEiJ_T0100430.1 MGP_WSBEiJ_G0038889.1 mouse_genomes_project 1 177538268 177541144 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000637.1 MGP_WSBEiJ_G0000580.1 mouse_genomes_project 1 145311529 145311663 + TEC TEC MGP_WSBEiJ_T0005772.1 MGP_WSBEiJ_G0004841.1 mouse_genomes_project 1 107121801 107132738 - Gm7160 lincRNA lincRNA MGP_WSBEiJ_T0005773.1 MGP_WSBEiJ_G0004841.1 mouse_genomes_project 1 107131687 107132708 - Gm7160 lincRNA lincRNA MGP_WSBEiJ_T0005888.1 MGP_WSBEiJ_G0004932.1 mouse_genomes_project 1 168534969 168539058 - 4930568G15Rik lincRNA lincRNA MGP_WSBEiJ_T0005889.1 MGP_WSBEiJ_G0004932.1 mouse_genomes_project 1 168537562 168563660 - 4930568G15Rik lincRNA lincRNA MGP_WSBEiJ_T0012088.1 MGP_WSBEiJ_G0010218.1 mouse_genomes_project 1 170779461 170779828 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018943.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41536817 41589041 - MGP_WSBEiJ_P0018943 Tgfbrap1 protein_coding protein_coding MGP_WSBEiJ_T0018944.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41536837 41583155 - MGP_WSBEiJ_P0018944 Tgfbrap1 protein_coding protein_coding MGP_WSBEiJ_T0018945.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41536879 41582889 - MGP_WSBEiJ_P0018945 Tgfbrap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0018946.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41544325 41550555 - Tgfbrap1 protein_coding retained_intron MGP_WSBEiJ_T0018947.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41549512 41582873 - MGP_WSBEiJ_P0018947 Tgfbrap1 protein_coding protein_coding MGP_WSBEiJ_T0018948.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41560707 41589027 - MGP_WSBEiJ_P0018948 Tgfbrap1 protein_coding protein_coding MGP_WSBEiJ_T0018949.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41564652 41582889 - Tgfbrap1 protein_coding retained_intron MGP_WSBEiJ_T0018950.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41564893 41589056 - Tgfbrap1 protein_coding retained_intron MGP_WSBEiJ_T0018951.1 MGP_WSBEiJ_G0015391.1 mouse_genomes_project 1 41566025 41588783 - MGP_WSBEiJ_P0018951 Tgfbrap1 protein_coding protein_coding MGP_WSBEiJ_T0023292.1 MGP_WSBEiJ_G0016297.1 mouse_genomes_project 1 186477368 186478544 - MGP_WSBEiJ_P0023292 Vmn1r1 protein_coding protein_coding MGP_WSBEiJ_T0100403.1 MGP_WSBEiJ_G0038862.1 mouse_genomes_project 1 88549992 88550206 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0023175.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184400619 184403682 - Psen2 protein_coding processed_transcript MGP_WSBEiJ_T0023176.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184400619 184427811 - MGP_WSBEiJ_P0023176 Psen2 protein_coding protein_coding MGP_WSBEiJ_T0023177.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184400619 184424674 - MGP_WSBEiJ_P0023177 Psen2 protein_coding protein_coding MGP_WSBEiJ_T0023178.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184400621 184403185 - Psen2 protein_coding retained_intron MGP_WSBEiJ_T0023179.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184400621 184417472 - MGP_WSBEiJ_P0023179 Psen2 protein_coding protein_coding MGP_WSBEiJ_T0023180.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184401004 184403679 - Psen2 protein_coding processed_transcript MGP_WSBEiJ_T0023181.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184401058 184419681 - MGP_WSBEiJ_P0023181 Psen2 protein_coding protein_coding MGP_WSBEiJ_T0023182.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184401060 184417279 - MGP_WSBEiJ_P0023182 Psen2 protein_coding protein_coding MGP_WSBEiJ_T0023183.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184401084 184403642 - Psen2 protein_coding processed_transcript MGP_WSBEiJ_T0023184.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184406146 184427755 - Psen2 protein_coding retained_intron MGP_WSBEiJ_T0023185.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184408795 184412747 - Psen2 protein_coding retained_intron MGP_WSBEiJ_T0023186.1 MGP_WSBEiJ_G0016273.1 mouse_genomes_project 1 184417159 184434909 - MGP_WSBEiJ_P0023186 Psen2 protein_coding protein_coding MGP_WSBEiJ_T0018410.1 MGP_WSBEiJ_G0015283.1 mouse_genomes_project 1 16548917 16579412 + MGP_WSBEiJ_P0018410 Tfap2b protein_coding protein_coding MGP_WSBEiJ_T0018411.1 MGP_WSBEiJ_G0015283.1 mouse_genomes_project 1 16548951 16578914 + MGP_WSBEiJ_P0018411 Tfap2b protein_coding protein_coding MGP_WSBEiJ_T0018412.1 MGP_WSBEiJ_G0015283.1 mouse_genomes_project 1 16552031 16575472 + MGP_WSBEiJ_P0018412 Tfap2b protein_coding protein_coding MGP_WSBEiJ_T0018413.1 MGP_WSBEiJ_G0015283.1 mouse_genomes_project 1 16552280 16554380 + Tfap2b protein_coding retained_intron MGP_WSBEiJ_T0018414.1 MGP_WSBEiJ_G0015283.1 mouse_genomes_project 1 16553816 16559190 + Tfap2b protein_coding retained_intron MGP_WSBEiJ_T0009362.1 MGP_WSBEiJ_G0007519.1 mouse_genomes_project 1 84388247 84388360 - Mir6353 miRNA miRNA MGP_WSBEiJ_T0100406.1 MGP_WSBEiJ_G0038865.1 mouse_genomes_project 1 88588980 88589763 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0021218.1 MGP_WSBEiJ_G0015839.1 mouse_genomes_project 1 130043067 130068468 + MGP_WSBEiJ_P0021218 Ubxn4 protein_coding protein_coding MGP_WSBEiJ_T0021219.1 MGP_WSBEiJ_G0015839.1 mouse_genomes_project 1 130043265 130092439 + MGP_WSBEiJ_P0021219 Ubxn4 protein_coding protein_coding MGP_WSBEiJ_T0021220.1 MGP_WSBEiJ_G0015839.1 mouse_genomes_project 1 130068436 130086227 + Ubxn4 protein_coding retained_intron MGP_WSBEiJ_T0021221.1 MGP_WSBEiJ_G0015839.1 mouse_genomes_project 1 130087690 130090083 + Ubxn4 protein_coding retained_intron MGP_WSBEiJ_T0018344.1 MGP_WSBEiJ_G0015267.1 mouse_genomes_project 1 13304007 13317509 - MGP_WSBEiJ_P0018344 4930444P10Rik protein_coding protein_coding MGP_WSBEiJ_T0018345.1 MGP_WSBEiJ_G0015267.1 mouse_genomes_project 1 13304007 13330388 - MGP_WSBEiJ_P0018345 4930444P10Rik protein_coding protein_coding MGP_WSBEiJ_T0018346.1 MGP_WSBEiJ_G0015267.1 mouse_genomes_project 1 13304007 13330388 - MGP_WSBEiJ_P0018346 4930444P10Rik protein_coding protein_coding MGP_WSBEiJ_T0009320.1 MGP_WSBEiJ_G0007477.1 mouse_genomes_project 1 10443111 10443193 + Gm27881 miRNA miRNA MGP_WSBEiJ_T0000503.1 MGP_WSBEiJ_G0000448.1 mouse_genomes_project 1 80738247 80740114 - TEC TEC MGP_WSBEiJ_T0098781.1 MGP_WSBEiJ_G0037444.1 mouse_genomes_project 1 108662834 108662965 - Gm24553 snoRNA snoRNA MGP_WSBEiJ_T0000625.1 MGP_WSBEiJ_G0000568.1 mouse_genomes_project 1 140687661 140688082 + TEC TEC MGP_WSBEiJ_T0005731.1 MGP_WSBEiJ_G0004804.1 mouse_genomes_project 1 87451957 87456083 - Gm29374 lincRNA lincRNA MGP_WSBEiJ_T0012119.1 MGP_WSBEiJ_G0010249.1 mouse_genomes_project 1 187586711 187602794 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021512.1 MGP_WSBEiJ_G0015909.1 mouse_genomes_project 1 136244846 136248796 - MGP_WSBEiJ_P0021512 Btg2 protein_coding protein_coding MGP_WSBEiJ_T0011903.1 MGP_WSBEiJ_G0010033.1 mouse_genomes_project 1 87854371 87854494 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000658.1 MGP_WSBEiJ_G0000601.1 mouse_genomes_project 1 158998638 158999385 - TEC TEC MGP_WSBEiJ_T0023006.1 MGP_WSBEiJ_G0016240.1 mouse_genomes_project 1 179006936 179444121 - MGP_WSBEiJ_P0023006 Rgs7 protein_coding protein_coding MGP_WSBEiJ_T0023007.1 MGP_WSBEiJ_G0016240.1 mouse_genomes_project 1 179006937 179443897 - MGP_WSBEiJ_P0023007 Rgs7 protein_coding protein_coding MGP_WSBEiJ_T0023008.1 MGP_WSBEiJ_G0016240.1 mouse_genomes_project 1 179007066 179444011 - MGP_WSBEiJ_P0023008 Rgs7 protein_coding protein_coding MGP_WSBEiJ_T0023009.1 MGP_WSBEiJ_G0016240.1 mouse_genomes_project 1 179007583 179442749 - MGP_WSBEiJ_P0023009 Rgs7 protein_coding protein_coding MGP_WSBEiJ_T0023010.1 MGP_WSBEiJ_G0016240.1 mouse_genomes_project 1 179007583 179035302 - MGP_WSBEiJ_P0023010 Rgs7 protein_coding protein_coding MGP_WSBEiJ_T0023011.1 MGP_WSBEiJ_G0016240.1 mouse_genomes_project 1 179007583 179035242 - MGP_WSBEiJ_P0023011 Rgs7 protein_coding protein_coding MGP_WSBEiJ_T0023012.1 MGP_WSBEiJ_G0016240.1 mouse_genomes_project 1 179007584 179027975 - MGP_WSBEiJ_P0023012 Rgs7 protein_coding protein_coding MGP_WSBEiJ_T0023013.1 MGP_WSBEiJ_G0016240.1 mouse_genomes_project 1 179023862 179027495 - Rgs7 protein_coding retained_intron MGP_WSBEiJ_T0020566.1 MGP_WSBEiJ_G0015701.1 mouse_genomes_project 1 90509738 90579041 - MGP_WSBEiJ_P0020566 Asb18 protein_coding protein_coding MGP_WSBEiJ_T0020567.1 MGP_WSBEiJ_G0015701.1 mouse_genomes_project 1 90513567 90579130 - MGP_WSBEiJ_P0020567 Asb18 protein_coding protein_coding MGP_WSBEiJ_T0020568.1 MGP_WSBEiJ_G0015701.1 mouse_genomes_project 1 90513654 90579041 - MGP_WSBEiJ_P0020568 Asb18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020569.1 MGP_WSBEiJ_G0015701.1 mouse_genomes_project 1 90513655 90579041 - MGP_WSBEiJ_P0020569 Asb18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100415.1 MGP_WSBEiJ_G0038874.1 mouse_genomes_project 1 108188680 108195583 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005823.1 MGP_WSBEiJ_G0004882.1 mouse_genomes_project 1 137895971 137980355 - Gm38399 lincRNA lincRNA MGP_WSBEiJ_T0022862.1 MGP_WSBEiJ_G0016184.1 mouse_genomes_project 1 175871599 175880592 + MGP_WSBEiJ_P0022862 Pex19 protein_coding protein_coding MGP_WSBEiJ_T0022863.1 MGP_WSBEiJ_G0016184.1 mouse_genomes_project 1 175871600 175875811 + Pex19 protein_coding retained_intron MGP_WSBEiJ_T0022864.1 MGP_WSBEiJ_G0016184.1 mouse_genomes_project 1 175871606 175882924 + MGP_WSBEiJ_P0022864 Pex19 protein_coding protein_coding MGP_WSBEiJ_T0022865.1 MGP_WSBEiJ_G0016184.1 mouse_genomes_project 1 175871617 175875006 + Pex19 protein_coding retained_intron MGP_WSBEiJ_T0022866.1 MGP_WSBEiJ_G0016184.1 mouse_genomes_project 1 175871617 175873733 + Pex19 protein_coding retained_intron MGP_WSBEiJ_T0022867.1 MGP_WSBEiJ_G0016184.1 mouse_genomes_project 1 175879268 175880009 + Pex19 protein_coding retained_intron MGP_WSBEiJ_T0000335.1 MGP_WSBEiJ_G0000283.1 mouse_genomes_project 1 3898550 3902228 - TEC TEC MGP_WSBEiJ_T0019649.1 MGP_WSBEiJ_G0015526.1 mouse_genomes_project 1 65360278 65362538 + MGP_WSBEiJ_P0019649 Crygf protein_coding protein_coding MGP_WSBEiJ_T0019650.1 MGP_WSBEiJ_G0015526.1 mouse_genomes_project 1 65360296 65362537 + MGP_WSBEiJ_P0019650 Crygf protein_coding protein_coding MGP_WSBEiJ_T0012102.1 MGP_WSBEiJ_G0010232.1 mouse_genomes_project 1 176554552 176554983 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022884.1 MGP_WSBEiJ_G0016187.1 mouse_genomes_project 1 175964003 175975234 - MGP_WSBEiJ_P0022884 Casq1 protein_coding protein_coding MGP_WSBEiJ_T0022885.1 MGP_WSBEiJ_G0016187.1 mouse_genomes_project 1 175964004 175968024 - Casq1 protein_coding retained_intron MGP_WSBEiJ_T0022886.1 MGP_WSBEiJ_G0016187.1 mouse_genomes_project 1 175969208 175975081 - MGP_WSBEiJ_P0022886 Casq1 protein_coding protein_coding MGP_WSBEiJ_T0005893.1 MGP_WSBEiJ_G0004936.1 mouse_genomes_project 1 169592223 169592384 + Gm37923 lincRNA lincRNA MGP_WSBEiJ_T0000352.1 MGP_WSBEiJ_G0000300.1 mouse_genomes_project 1 10413531 10415132 - TEC TEC MGP_WSBEiJ_T0002733.1 MGP_WSBEiJ_G0002602.1 mouse_genomes_project 1 43211805 43217080 - 4930521E06Rik antisense antisense MGP_WSBEiJ_T0009413.1 MGP_WSBEiJ_G0007570.1 mouse_genomes_project 1 189655485 189655552 + Mir194-1 miRNA miRNA MGP_WSBEiJ_T0000668.1 MGP_WSBEiJ_G0000611.1 mouse_genomes_project 1 160532162 160533339 - TEC TEC MGP_WSBEiJ_T0023414.1 MGP_WSBEiJ_G0016326.1 mouse_genomes_project 1 191133052 191158347 - MGP_WSBEiJ_P0023414 Rrp15 protein_coding protein_coding MGP_WSBEiJ_T0023415.1 MGP_WSBEiJ_G0016326.1 mouse_genomes_project 1 191133166 191158314 - Rrp15 protein_coding retained_intron MGP_WSBEiJ_T0002747.1 MGP_WSBEiJ_G0002613.1 mouse_genomes_project 1 58657767 58676250 - Gm28411 antisense antisense MGP_WSBEiJ_T0002749.1 MGP_WSBEiJ_G0002613.1 mouse_genomes_project 1 58668411 58676983 - Gm28411 antisense antisense MGP_WSBEiJ_T0020559.1 MGP_WSBEiJ_G0015699.1 mouse_genomes_project 1 89989976 90454185 + MGP_WSBEiJ_P0020559 Agap1 protein_coding protein_coding MGP_WSBEiJ_T0020560.1 MGP_WSBEiJ_G0015699.1 mouse_genomes_project 1 89990044 90446180 + MGP_WSBEiJ_P0020560 Agap1 protein_coding protein_coding MGP_WSBEiJ_T0020561.1 MGP_WSBEiJ_G0015699.1 mouse_genomes_project 1 89990426 89994847 + Agap1 protein_coding retained_intron MGP_WSBEiJ_T0020562.1 MGP_WSBEiJ_G0015699.1 mouse_genomes_project 1 90124351 90451845 + MGP_WSBEiJ_P0020562 Agap1 protein_coding protein_coding MGP_WSBEiJ_T0020563.1 MGP_WSBEiJ_G0015699.1 mouse_genomes_project 1 90124862 90445073 + MGP_WSBEiJ_P0020563 Agap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022357.1 MGP_WSBEiJ_G0016068.1 mouse_genomes_project 1 165971964 166000332 + MGP_WSBEiJ_P0022357 Vamp4 protein_coding protein_coding MGP_WSBEiJ_T0022358.1 MGP_WSBEiJ_G0016068.1 mouse_genomes_project 1 165972076 165983438 + Vamp4 protein_coding retained_intron MGP_WSBEiJ_T0022359.1 MGP_WSBEiJ_G0016068.1 mouse_genomes_project 1 165972081 166000331 + MGP_WSBEiJ_P0022359 Vamp4 protein_coding protein_coding MGP_WSBEiJ_T0022360.1 MGP_WSBEiJ_G0016068.1 mouse_genomes_project 1 165972277 166000326 + MGP_WSBEiJ_P0022360 Vamp4 protein_coding protein_coding MGP_WSBEiJ_T0022361.1 MGP_WSBEiJ_G0016068.1 mouse_genomes_project 1 165976270 165996004 + Vamp4 protein_coding processed_transcript MGP_WSBEiJ_T0000493.1 MGP_WSBEiJ_G0000438.1 mouse_genomes_project 1 77042684 77046453 - TEC TEC MGP_WSBEiJ_T0022970.1 MGP_WSBEiJ_G0016216.1 mouse_genomes_project 1 177266295 177272990 - MGP_WSBEiJ_P0022970 protein_coding protein_coding MGP_WSBEiJ_T0023603.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197773019 197797709 - MGP_WSBEiJ_P0023603 Diexf protein_coding protein_coding MGP_WSBEiJ_T0023604.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197774481 197800591 - MGP_WSBEiJ_P0023604 Diexf protein_coding protein_coding MGP_WSBEiJ_T0023605.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197786306 197813756 - MGP_WSBEiJ_P0023605 Diexf protein_coding protein_coding MGP_WSBEiJ_T0023606.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197786322 197813728 - MGP_WSBEiJ_P0023606 Diexf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023607.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197790726 197798412 - Diexf protein_coding retained_intron MGP_WSBEiJ_T0023608.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197804193 197806187 - Diexf protein_coding retained_intron MGP_WSBEiJ_T0023609.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197804358 197811831 - Diexf protein_coding processed_transcript MGP_WSBEiJ_T0023610.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197805757 197813691 - MGP_WSBEiJ_P0023610 Diexf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023611.1 MGP_WSBEiJ_G0016363.1 mouse_genomes_project 1 197805775 197807522 - Diexf protein_coding processed_transcript MGP_WSBEiJ_T0023086.1 MGP_WSBEiJ_G0016257.1 mouse_genomes_project 1 182249269 182315985 + MGP_WSBEiJ_P0023086 Desi2 protein_coding protein_coding MGP_WSBEiJ_T0023087.1 MGP_WSBEiJ_G0016257.1 mouse_genomes_project 1 182249269 182323055 + MGP_WSBEiJ_P0023087 Desi2 protein_coding protein_coding MGP_WSBEiJ_T0023088.1 MGP_WSBEiJ_G0016257.1 mouse_genomes_project 1 182249571 182314422 + MGP_WSBEiJ_P0023088 Desi2 protein_coding protein_coding MGP_WSBEiJ_T0023089.1 MGP_WSBEiJ_G0016257.1 mouse_genomes_project 1 182321844 182323049 + MGP_WSBEiJ_P0023089 Desi2 protein_coding protein_coding MGP_WSBEiJ_T0018803.1 MGP_WSBEiJ_G0015359.1 mouse_genomes_project 1 36065956 36076373 - MGP_WSBEiJ_P0018803 Lyg2 protein_coding protein_coding MGP_WSBEiJ_T0000683.1 MGP_WSBEiJ_G0000626.1 mouse_genomes_project 1 163981863 163984600 - TEC TEC MGP_WSBEiJ_T0011853.1 MGP_WSBEiJ_G0009983.1 mouse_genomes_project 1 63783357 63783575 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000563.1 MGP_WSBEiJ_G0000508.1 mouse_genomes_project 1 122837010 122840064 + TEC TEC MGP_WSBEiJ_T0000573.1 MGP_WSBEiJ_G0000518.1 mouse_genomes_project 1 125467168 125470046 - TEC TEC MGP_WSBEiJ_T0011937.1 MGP_WSBEiJ_G0010067.1 mouse_genomes_project 1 106701933 106702194 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005715.1 MGP_WSBEiJ_G0004791.1 mouse_genomes_project 1 77874306 77902341 - Gm28387 lincRNA lincRNA MGP_WSBEiJ_T0000322.1 MGP_WSBEiJ_G0000270.1 mouse_genomes_project 1 387885 390703 - TEC TEC MGP_WSBEiJ_T0021832.1 MGP_WSBEiJ_G0015975.1 mouse_genomes_project 1 146574470 146579484 - MGP_WSBEiJ_P0021832 Rgs2 protein_coding protein_coding MGP_WSBEiJ_T0021833.1 MGP_WSBEiJ_G0015975.1 mouse_genomes_project 1 146576816 146579458 - MGP_WSBEiJ_P0021833 Rgs2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021834.1 MGP_WSBEiJ_G0015975.1 mouse_genomes_project 1 146577019 146579355 - MGP_WSBEiJ_P0021834 Rgs2 protein_coding protein_coding MGP_WSBEiJ_T0021835.1 MGP_WSBEiJ_G0015975.1 mouse_genomes_project 1 146577653 146579444 - Rgs2 protein_coding retained_intron MGP_WSBEiJ_T0012042.1 MGP_WSBEiJ_G0010172.1 mouse_genomes_project 1 152855864 152857931 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002740.1 MGP_WSBEiJ_G0002608.1 mouse_genomes_project 1 56894931 56902208 - Gm17234 antisense antisense MGP_WSBEiJ_T0011799.1 MGP_WSBEiJ_G0009929.1 mouse_genomes_project 1 48891698 48892432 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009405.1 MGP_WSBEiJ_G0007562.1 mouse_genomes_project 1 175382252 175382313 - Mir7683 miRNA miRNA MGP_WSBEiJ_T0098795.1 MGP_WSBEiJ_G0037458.1 mouse_genomes_project 1 140131271 140131387 + Gm22727 snoRNA snoRNA MGP_WSBEiJ_T0005959.1 MGP_WSBEiJ_G0004987.1 mouse_genomes_project 1 194991005 195006137 + Gm29678 lincRNA lincRNA MGP_WSBEiJ_T0012083.1 MGP_WSBEiJ_G0010213.1 mouse_genomes_project 1 169448979 169450888 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009403.1 MGP_WSBEiJ_G0007560.1 mouse_genomes_project 1 172060236 172060356 + Mir6348 miRNA miRNA MGP_WSBEiJ_T0005723.1 MGP_WSBEiJ_G0004797.1 mouse_genomes_project 1 80206137 80209857 + 2310015K22Rik lincRNA lincRNA MGP_WSBEiJ_T0021010.1 MGP_WSBEiJ_G0015802.1 mouse_genomes_project 1 119717905 119729848 + MGP_WSBEiJ_P0021010 Nifk protein_coding protein_coding MGP_WSBEiJ_T0021011.1 MGP_WSBEiJ_G0015802.1 mouse_genomes_project 1 119717920 119728967 + MGP_WSBEiJ_P0021011 Nifk protein_coding protein_coding MGP_WSBEiJ_T0021012.1 MGP_WSBEiJ_G0015802.1 mouse_genomes_project 1 119718218 119725406 + MGP_WSBEiJ_P0021012 Nifk protein_coding protein_coding MGP_WSBEiJ_T0098806.1 MGP_WSBEiJ_G0037469.1 mouse_genomes_project 1 164396559 164396621 + Gm22489 snoRNA snoRNA MGP_WSBEiJ_T0021557.1 MGP_WSBEiJ_G0015920.1 mouse_genomes_project 1 136644818 136658867 + Klhl12 protein_coding retained_intron MGP_WSBEiJ_T0021558.1 MGP_WSBEiJ_G0015920.1 mouse_genomes_project 1 136644818 136684131 + MGP_WSBEiJ_P0021558 Klhl12 protein_coding protein_coding MGP_WSBEiJ_T0021559.1 MGP_WSBEiJ_G0015920.1 mouse_genomes_project 1 136644818 136684276 + MGP_WSBEiJ_P0021559 Klhl12 protein_coding protein_coding MGP_WSBEiJ_T0021560.1 MGP_WSBEiJ_G0015920.1 mouse_genomes_project 1 136644842 136684131 + MGP_WSBEiJ_P0021560 Klhl12 protein_coding protein_coding MGP_WSBEiJ_T0021561.1 MGP_WSBEiJ_G0015920.1 mouse_genomes_project 1 136660840 136665872 + Klhl12 protein_coding retained_intron MGP_WSBEiJ_T0021562.1 MGP_WSBEiJ_G0015920.1 mouse_genomes_project 1 136667291 136679177 + Klhl12 protein_coding retained_intron MGP_WSBEiJ_T0012086.1 MGP_WSBEiJ_G0010216.1 mouse_genomes_project 1 170279681 170279993 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097550.1 MGP_WSBEiJ_G0036213.1 mouse_genomes_project 1 71998134 71998325 + Gm24497 snRNA snRNA MGP_WSBEiJ_T0005618.1 MGP_WSBEiJ_G0004724.1 mouse_genomes_project 1 40777960 40805224 - Gm28140 lincRNA lincRNA MGP_WSBEiJ_T0009341.1 MGP_WSBEiJ_G0007498.1 mouse_genomes_project 1 52259051 52259176 - Gm25240 miRNA miRNA MGP_WSBEiJ_T0011923.1 MGP_WSBEiJ_G0010053.1 mouse_genomes_project 1 100977963 100978527 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097531.1 MGP_WSBEiJ_G0036194.1 mouse_genomes_project 1 31352052 31352158 + Gm23453 snRNA snRNA MGP_WSBEiJ_T0000689.1 MGP_WSBEiJ_G0000632.1 mouse_genomes_project 1 164342910 164344078 + TEC TEC MGP_WSBEiJ_T0000357.1 MGP_WSBEiJ_G0000305.1 mouse_genomes_project 1 10826454 10827664 - TEC TEC MGP_WSBEiJ_T0011769.1 MGP_WSBEiJ_G0009899.1 mouse_genomes_project 1 42438034 42438850 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005716.1 MGP_WSBEiJ_G0004792.1 mouse_genomes_project 1 78559989 78576631 - 5730419F03Rik lincRNA lincRNA MGP_WSBEiJ_T0023406.1 MGP_WSBEiJ_G0016324.1 mouse_genomes_project 1 190456213 190484922 - MGP_WSBEiJ_P0023406 Lyplal1 protein_coding protein_coding MGP_WSBEiJ_T0023407.1 MGP_WSBEiJ_G0016324.1 mouse_genomes_project 1 190457015 190484900 - Lyplal1 protein_coding processed_transcript MGP_WSBEiJ_T0005783.1 MGP_WSBEiJ_G0004849.1 mouse_genomes_project 1 115249504 115329381 - 9330185C12Rik lincRNA lincRNA MGP_WSBEiJ_T0020986.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111176726 111191370 + MGP_WSBEiJ_P0020986 Cdh7 protein_coding protein_coding MGP_WSBEiJ_T0020987.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111177005 111345845 + MGP_WSBEiJ_P0020987 Cdh7 protein_coding protein_coding MGP_WSBEiJ_T0020988.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111177276 111190953 + MGP_WSBEiJ_P0020988 Cdh7 protein_coding protein_coding MGP_WSBEiJ_T0020989.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111177301 111190012 + MGP_WSBEiJ_P0020989 Cdh7 protein_coding protein_coding MGP_WSBEiJ_T0020990.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111177524 111344895 + MGP_WSBEiJ_P0020990 Cdh7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020991.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111177576 111194077 + MGP_WSBEiJ_P0020991 Cdh7 protein_coding protein_coding MGP_WSBEiJ_T0020992.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111178032 111344701 + MGP_WSBEiJ_P0020992 Cdh7 protein_coding protein_coding MGP_WSBEiJ_T0020993.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111189611 111344889 + MGP_WSBEiJ_P0020993 Cdh7 protein_coding protein_coding MGP_WSBEiJ_T0020994.1 MGP_WSBEiJ_G0015797.1 mouse_genomes_project 1 111298302 111343758 + MGP_WSBEiJ_P0020994 Cdh7 protein_coding protein_coding MGP_WSBEiJ_T0018530.1 MGP_WSBEiJ_G0015312.1 mouse_genomes_project 1 28960647 28996144 + MGP_WSBEiJ_P0018530 Lgsn protein_coding protein_coding MGP_WSBEiJ_T0018531.1 MGP_WSBEiJ_G0015312.1 mouse_genomes_project 1 28976133 28996144 + MGP_WSBEiJ_P0018531 Lgsn protein_coding protein_coding MGP_WSBEiJ_T0018541.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31646483 31652911 + Rab23 protein_coding processed_transcript MGP_WSBEiJ_T0018542.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31646483 31655965 + Rab23 protein_coding retained_intron MGP_WSBEiJ_T0018543.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31646491 31672140 + MGP_WSBEiJ_P0018543 Rab23 protein_coding protein_coding MGP_WSBEiJ_T0018544.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31646505 31672133 + MGP_WSBEiJ_P0018544 Rab23 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018545.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31646506 31654550 + Rab23 protein_coding retained_intron MGP_WSBEiJ_T0018546.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31646734 31665184 + Rab23 protein_coding retained_intron MGP_WSBEiJ_T0018547.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31647003 31672137 + MGP_WSBEiJ_P0018547 Rab23 protein_coding protein_coding MGP_WSBEiJ_T0018548.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31664357 31670287 + Rab23 protein_coding retained_intron MGP_WSBEiJ_T0018549.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31666413 31668946 + Rab23 protein_coding retained_intron MGP_WSBEiJ_T0018550.1 MGP_WSBEiJ_G0015316.1 mouse_genomes_project 1 31667712 31670348 + Rab23 protein_coding retained_intron MGP_WSBEiJ_T0021493.1 MGP_WSBEiJ_G0015903.1 mouse_genomes_project 1 135791674 135796681 - MGP_WSBEiJ_P0021493 protein_coding protein_coding MGP_WSBEiJ_T0018926.1 MGP_WSBEiJ_G0015386.1 mouse_genomes_project 1 39077493 39097365 - MGP_WSBEiJ_P0018926 Mfsd9 protein_coding protein_coding MGP_WSBEiJ_T0018927.1 MGP_WSBEiJ_G0015386.1 mouse_genomes_project 1 39077496 39097389 - MGP_WSBEiJ_P0018927 Mfsd9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018928.1 MGP_WSBEiJ_G0015386.1 mouse_genomes_project 1 39087453 39097359 - Mfsd9 protein_coding retained_intron MGP_WSBEiJ_T0023521.1 MGP_WSBEiJ_G0016345.1 mouse_genomes_project 1 195728500 195739671 + Batf3 protein_coding processed_transcript MGP_WSBEiJ_T0023522.1 MGP_WSBEiJ_G0016345.1 mouse_genomes_project 1 195728533 195740130 + Batf3 protein_coding processed_transcript MGP_WSBEiJ_T0023523.1 MGP_WSBEiJ_G0016345.1 mouse_genomes_project 1 195728978 195740128 + MGP_WSBEiJ_P0023523 Batf3 protein_coding protein_coding MGP_WSBEiJ_T0023524.1 MGP_WSBEiJ_G0016345.1 mouse_genomes_project 1 195729036 195739671 + Batf3 protein_coding processed_transcript MGP_WSBEiJ_T0023525.1 MGP_WSBEiJ_G0016345.1 mouse_genomes_project 1 195731111 195740094 + Batf3 protein_coding retained_intron MGP_WSBEiJ_T0021233.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 131136730 131290244 + Thsd7b protein_coding retained_intron MGP_WSBEiJ_T0021234.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 131136772 132124568 + MGP_WSBEiJ_P0021234 Thsd7b protein_coding protein_coding MGP_WSBEiJ_T0021235.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 131136891 131925421 + MGP_WSBEiJ_P0021235 Thsd7b protein_coding protein_coding MGP_WSBEiJ_T0021236.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 131136913 131491248 + Thsd7b protein_coding processed_transcript MGP_WSBEiJ_T0021237.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 131393256 131491282 + MGP_WSBEiJ_P0021237 Thsd7b protein_coding protein_coding MGP_WSBEiJ_T0021238.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 131473466 131476234 + Thsd7b protein_coding retained_intron MGP_WSBEiJ_T0021239.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 131797057 132083680 + Thsd7b protein_coding processed_transcript MGP_WSBEiJ_T0021240.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 132044207 132124566 + Thsd7b protein_coding processed_transcript MGP_WSBEiJ_T0021241.1 MGP_WSBEiJ_G0015844.1 mouse_genomes_project 1 132044222 132045784 + Thsd7b protein_coding processed_transcript MGP_WSBEiJ_T0002871.1 MGP_WSBEiJ_G0002706.1 mouse_genomes_project 1 168981048 168982243 - Gm38325 antisense antisense MGP_WSBEiJ_T0000393.1 MGP_WSBEiJ_G0000339.1 mouse_genomes_project 1 23339347 23343057 - TEC TEC MGP_WSBEiJ_T0099970.1 MGP_WSBEiJ_G0038630.1 mouse_genomes_project 1 59714050 59714257 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0022943.1 MGP_WSBEiJ_G0016204.1 mouse_genomes_project 1 176739193 176740629 + MGP_WSBEiJ_P0022943 Olfr16 protein_coding protein_coding MGP_WSBEiJ_T0011670.1 MGP_WSBEiJ_G0009800.1 mouse_genomes_project 1 5559269 5559669 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021054.1 MGP_WSBEiJ_G0015806.1 mouse_genomes_project 1 120856119 120862957 - MGP_WSBEiJ_P0021054 Inhbb protein_coding protein_coding MGP_WSBEiJ_T0005968.1 MGP_WSBEiJ_G0004995.1 mouse_genomes_project 1 196150392 196153492 - Gm37432 lincRNA lincRNA MGP_WSBEiJ_T0096892.1 MGP_WSBEiJ_G0035573.1 mouse_genomes_project 1 169290057 169290172 - Gm24808 rRNA rRNA MGP_WSBEiJ_T0097564.1 MGP_WSBEiJ_G0036227.1 mouse_genomes_project 1 119863997 119864122 - Gm22710 snRNA snRNA MGP_WSBEiJ_T0098820.1 MGP_WSBEiJ_G0037483.1 mouse_genomes_project 1 174966801 174966892 + Gm25151 snoRNA snoRNA MGP_WSBEiJ_T0011659.1 MGP_WSBEiJ_G0009789.1 mouse_genomes_project 1 3963731 3963761 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011740.1 MGP_WSBEiJ_G0009870.1 mouse_genomes_project 1 31578780 31579108 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005685.1 MGP_WSBEiJ_G0004771.1 mouse_genomes_project 1 69031522 69034553 + Gm28497 lincRNA lincRNA MGP_WSBEiJ_T0000544.1 MGP_WSBEiJ_G0000489.1 mouse_genomes_project 1 98453710 98454893 - TEC TEC MGP_WSBEiJ_T0005690.1 MGP_WSBEiJ_G0004774.1 mouse_genomes_project 1 71608488 71633512 - Gm28818 lincRNA lincRNA MGP_WSBEiJ_T0005691.1 MGP_WSBEiJ_G0004774.1 mouse_genomes_project 1 71611166 71613354 - Gm28818 lincRNA lincRNA MGP_WSBEiJ_T0005645.1 MGP_WSBEiJ_G0004739.1 mouse_genomes_project 1 50460436 50462019 - Gm28055 lincRNA lincRNA MGP_WSBEiJ_T0005646.1 MGP_WSBEiJ_G0004739.1 mouse_genomes_project 1 50461243 50512175 - Gm28055 lincRNA lincRNA MGP_WSBEiJ_T0011952.1 MGP_WSBEiJ_G0010082.1 mouse_genomes_project 1 111695878 111696806 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019064.1 MGP_WSBEiJ_G0015417.1 mouse_genomes_project 1 50040721 50054392 + MGP_WSBEiJ_P0019064 Sdpr protein_coding protein_coding MGP_WSBEiJ_T0021622.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137665227 137714240 - MGP_WSBEiJ_P0021622 Ipo9 protein_coding protein_coding MGP_WSBEiJ_T0021623.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137667386 137714199 - MGP_WSBEiJ_P0021623 Ipo9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021624.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137667386 137714232 - MGP_WSBEiJ_P0021624 Ipo9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021625.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137668030 137671514 - MGP_WSBEiJ_P0021625 Ipo9 protein_coding protein_coding MGP_WSBEiJ_T0021626.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137668718 137671469 - Ipo9 protein_coding retained_intron MGP_WSBEiJ_T0021627.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137669200 137671620 - Ipo9 protein_coding retained_intron MGP_WSBEiJ_T0021628.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137669305 137670479 - Ipo9 protein_coding retained_intron MGP_WSBEiJ_T0021629.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137671535 137672713 - Ipo9 protein_coding retained_intron MGP_WSBEiJ_T0021630.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137672356 137686208 - Ipo9 protein_coding processed_transcript MGP_WSBEiJ_T0021631.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137677014 137686299 - Ipo9 protein_coding retained_intron MGP_WSBEiJ_T0021632.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137685186 137714174 - MGP_WSBEiJ_P0021632 Ipo9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021633.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137688859 137689979 - Ipo9 protein_coding retained_intron MGP_WSBEiJ_T0021634.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137689309 137702817 - Ipo9 protein_coding retained_intron MGP_WSBEiJ_T0021635.1 MGP_WSBEiJ_G0015936.1 mouse_genomes_project 1 137690695 137714160 - MGP_WSBEiJ_P0021635 Ipo9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097598.1 MGP_WSBEiJ_G0036261.1 mouse_genomes_project 1 180682505 180682613 + Gm26104 snRNA snRNA MGP_WSBEiJ_T0000488.1 MGP_WSBEiJ_G0000433.1 mouse_genomes_project 1 74127622 74127941 - TEC TEC MGP_WSBEiJ_T0000742.1 MGP_WSBEiJ_G0000684.1 mouse_genomes_project 1 186290462 186294331 - TEC TEC MGP_WSBEiJ_T0002901.1 MGP_WSBEiJ_G0002731.1 mouse_genomes_project 1 186804526 186814341 + Gm37885 antisense antisense MGP_WSBEiJ_T0002902.1 MGP_WSBEiJ_G0002731.1 mouse_genomes_project 1 186811912 186813467 + Gm37885 antisense antisense MGP_WSBEiJ_T0005842.1 MGP_WSBEiJ_G0004896.1 mouse_genomes_project 1 141307316 141307980 - 1700019P21Rik lincRNA lincRNA MGP_WSBEiJ_T0012108.1 MGP_WSBEiJ_G0010238.1 mouse_genomes_project 1 181793593 181794203 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0021990.1 MGP_WSBEiJ_G0016005.1 mouse_genomes_project 1 156421636 156449032 + MGP_WSBEiJ_P0021990 Shcbp1l protein_coding protein_coding MGP_WSBEiJ_T0021991.1 MGP_WSBEiJ_G0016005.1 mouse_genomes_project 1 156421646 156436369 + MGP_WSBEiJ_P0021991 Shcbp1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021992.1 MGP_WSBEiJ_G0016005.1 mouse_genomes_project 1 156441787 156445417 + Shcbp1l protein_coding retained_intron MGP_WSBEiJ_T0011964.1 MGP_WSBEiJ_G0010094.1 mouse_genomes_project 1 114933001 114933539 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098742.1 MGP_WSBEiJ_G0037405.1 mouse_genomes_project 1 29063767 29063894 - Gm26145 snoRNA snoRNA MGP_WSBEiJ_T0012061.1 MGP_WSBEiJ_G0010191.1 mouse_genomes_project 1 160566960 160567362 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022185.1 MGP_WSBEiJ_G0016040.1 mouse_genomes_project 1 160638893 160672666 + MGP_WSBEiJ_P0022185 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022186.1 MGP_WSBEiJ_G0016040.1 mouse_genomes_project 1 160638893 160672783 + MGP_WSBEiJ_P0022186 protein_coding protein_coding MGP_WSBEiJ_T0022187.1 MGP_WSBEiJ_G0016040.1 mouse_genomes_project 1 160643286 160654849 + MGP_WSBEiJ_P0022187 protein_coding protein_coding MGP_WSBEiJ_T0022188.1 MGP_WSBEiJ_G0016040.1 mouse_genomes_project 1 160656430 160677586 + MGP_WSBEiJ_P0022188 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011913.1 MGP_WSBEiJ_G0010043.1 mouse_genomes_project 1 94061352 94061898 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098774.1 MGP_WSBEiJ_G0037437.1 mouse_genomes_project 1 95866614 95866724 - Gm23181 snoRNA snoRNA MGP_WSBEiJ_T0000354.1 MGP_WSBEiJ_G0000302.1 mouse_genomes_project 1 10482112 10485272 - TEC TEC MGP_WSBEiJ_T0018388.1 MGP_WSBEiJ_G0015274.1 mouse_genomes_project 1 13942247 13946183 + Ly96 protein_coding retained_intron MGP_WSBEiJ_T0018389.1 MGP_WSBEiJ_G0015274.1 mouse_genomes_project 1 13942629 13965319 + MGP_WSBEiJ_P0018389 Ly96 protein_coding protein_coding MGP_WSBEiJ_T0018390.1 MGP_WSBEiJ_G0015274.1 mouse_genomes_project 1 13942704 13965243 + MGP_WSBEiJ_P0018390 Ly96 protein_coding protein_coding MGP_WSBEiJ_T0005574.1 MGP_WSBEiJ_G0004687.1 mouse_genomes_project 1 15635088 15641106 + lincRNA lincRNA MGP_WSBEiJ_T0000477.1 MGP_WSBEiJ_G0000422.1 mouse_genomes_project 1 67405162 67407463 + TEC TEC MGP_WSBEiJ_T0021943.1 MGP_WSBEiJ_G0015995.1 mouse_genomes_project 1 155297635 155315128 - MGP_WSBEiJ_P0021943 Tsen15 protein_coding protein_coding MGP_WSBEiJ_T0021944.1 MGP_WSBEiJ_G0015995.1 mouse_genomes_project 1 155297738 155298983 - Tsen15 protein_coding retained_intron MGP_WSBEiJ_T0021945.1 MGP_WSBEiJ_G0015995.1 mouse_genomes_project 1 155298105 155315038 - MGP_WSBEiJ_P0021945 Tsen15 protein_coding protein_coding MGP_WSBEiJ_T0021946.1 MGP_WSBEiJ_G0015995.1 mouse_genomes_project 1 155298112 155312191 - Tsen15 protein_coding retained_intron MGP_WSBEiJ_T0021947.1 MGP_WSBEiJ_G0015995.1 mouse_genomes_project 1 155298675 155312538 - Tsen15 protein_coding retained_intron MGP_WSBEiJ_T0021948.1 MGP_WSBEiJ_G0015995.1 mouse_genomes_project 1 155311790 155315134 - Tsen15 protein_coding processed_transcript MGP_WSBEiJ_T0021949.1 MGP_WSBEiJ_G0015995.1 mouse_genomes_project 1 155312648 155315066 - Tsen15 protein_coding retained_intron MGP_WSBEiJ_T0023378.1 MGP_WSBEiJ_G0016318.1 mouse_genomes_project 1 189224660 189330027 - MGP_WSBEiJ_P0023378 Mark1 protein_coding protein_coding MGP_WSBEiJ_T0023379.1 MGP_WSBEiJ_G0016318.1 mouse_genomes_project 1 189247393 189329932 - MGP_WSBEiJ_P0023379 Mark1 protein_coding protein_coding MGP_WSBEiJ_T0019623.1 MGP_WSBEiJ_G0015519.1 mouse_genomes_project 1 64435813 64437883 - MGP_WSBEiJ_P0019623 Crygb protein_coding protein_coding MGP_WSBEiJ_T0019895.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74458097 74467321 - MGP_WSBEiJ_P0019895 Rnf25 protein_coding protein_coding MGP_WSBEiJ_T0019896.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74458097 74467296 - MGP_WSBEiJ_P0019896 Rnf25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019897.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74458102 74467301 - MGP_WSBEiJ_P0019897 Rnf25 protein_coding protein_coding MGP_WSBEiJ_T0019898.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74458571 74459151 - Rnf25 protein_coding retained_intron MGP_WSBEiJ_T0019899.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74459558 74466488 - MGP_WSBEiJ_P0019899 Rnf25 protein_coding protein_coding MGP_WSBEiJ_T0019900.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74460234 74466523 - MGP_WSBEiJ_P0019900 Rnf25 protein_coding protein_coding MGP_WSBEiJ_T0019901.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74464108 74464517 - Rnf25 protein_coding retained_intron MGP_WSBEiJ_T0019902.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74464282 74467269 - MGP_WSBEiJ_P0019902 Rnf25 protein_coding protein_coding MGP_WSBEiJ_T0019903.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74464469 74467318 - Rnf25 protein_coding retained_intron MGP_WSBEiJ_T0019904.1 MGP_WSBEiJ_G0015572.1 mouse_genomes_project 1 74464652 74467289 - MGP_WSBEiJ_P0019904 Rnf25 protein_coding protein_coding MGP_WSBEiJ_T0011792.1 MGP_WSBEiJ_G0009922.1 mouse_genomes_project 1 47810077 47810292 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005876.1 MGP_WSBEiJ_G0004922.1 mouse_genomes_project 1 166710189 166712024 - Gm26523 lincRNA lincRNA MGP_WSBEiJ_T0023481.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195307683 195536206 - MGP_WSBEiJ_P0023481 Rps6kc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023482.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195392629 195457084 - MGP_WSBEiJ_P0023482 Rps6kc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023483.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195392629 195536229 - MGP_WSBEiJ_P0023483 Rps6kc1 protein_coding protein_coding MGP_WSBEiJ_T0023484.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195392629 195536197 - MGP_WSBEiJ_P0023484 Rps6kc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023485.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195415459 195467633 - Rps6kc1 protein_coding retained_intron MGP_WSBEiJ_T0023486.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195417833 195536193 - Rps6kc1 protein_coding retained_intron MGP_WSBEiJ_T0023487.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195430394 195431970 - Rps6kc1 protein_coding retained_intron MGP_WSBEiJ_T0023488.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195494564 195524487 - Rps6kc1 protein_coding processed_transcript MGP_WSBEiJ_T0023489.1 MGP_WSBEiJ_G0016338.1 mouse_genomes_project 1 195508981 195536228 - MGP_WSBEiJ_P0023489 Rps6kc1 protein_coding protein_coding MGP_WSBEiJ_T0097605.1 MGP_WSBEiJ_G0036268.1 mouse_genomes_project 1 196442888 196442992 - Gm22446 snRNA snRNA MGP_WSBEiJ_T0018713.1 MGP_WSBEiJ_G0015345.1 mouse_genomes_project 1 34778210 34791144 - MGP_WSBEiJ_P0018713 Actr1b protein_coding protein_coding MGP_WSBEiJ_T0018714.1 MGP_WSBEiJ_G0015345.1 mouse_genomes_project 1 34781309 34781748 - Actr1b protein_coding retained_intron MGP_WSBEiJ_T0018715.1 MGP_WSBEiJ_G0015345.1 mouse_genomes_project 1 34782858 34791083 - Actr1b protein_coding retained_intron MGP_WSBEiJ_T0018716.1 MGP_WSBEiJ_G0015345.1 mouse_genomes_project 1 34782949 34790814 - MGP_WSBEiJ_P0018716 Actr1b protein_coding protein_coding MGP_WSBEiJ_T0018717.1 MGP_WSBEiJ_G0015345.1 mouse_genomes_project 1 34782970 34796062 - MGP_WSBEiJ_P0018717 Actr1b protein_coding protein_coding MGP_WSBEiJ_T0018718.1 MGP_WSBEiJ_G0015345.1 mouse_genomes_project 1 34783654 34788306 - Actr1b protein_coding retained_intron MGP_WSBEiJ_T0018719.1 MGP_WSBEiJ_G0015345.1 mouse_genomes_project 1 34787678 34791055 - Actr1b protein_coding processed_transcript MGP_WSBEiJ_T0005824.1 MGP_WSBEiJ_G0004883.1 mouse_genomes_project 1 138570239 138573041 + A430034D21Rik lincRNA lincRNA MGP_WSBEiJ_T0012101.1 MGP_WSBEiJ_G0010231.1 mouse_genomes_project 1 175833445 175833775 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000390.1 MGP_WSBEiJ_G0000336.1 mouse_genomes_project 1 23287112 23291839 - TEC TEC MGP_WSBEiJ_T0097591.1 MGP_WSBEiJ_G0036254.1 mouse_genomes_project 1 174670816 174670980 + Gm26110 snRNA snRNA MGP_WSBEiJ_T0000466.1 MGP_WSBEiJ_G0000411.1 mouse_genomes_project 1 61514046 61516564 + TEC TEC MGP_WSBEiJ_T0022521.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169292908 169376983 + MGP_WSBEiJ_P0022521 Cd247 protein_coding protein_coding MGP_WSBEiJ_T0022522.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169292908 169376983 + MGP_WSBEiJ_P0022522 Cd247 protein_coding protein_coding MGP_WSBEiJ_T0022523.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169292908 169376983 + MGP_WSBEiJ_P0022523 Cd247 protein_coding protein_coding MGP_WSBEiJ_T0022524.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169292916 169368640 + MGP_WSBEiJ_P0022524 Cd247 protein_coding protein_coding MGP_WSBEiJ_T0022525.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169292950 169373266 + MGP_WSBEiJ_P0022525 Cd247 protein_coding protein_coding MGP_WSBEiJ_T0022526.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169292992 169374924 + MGP_WSBEiJ_P0022526 Cd247 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022527.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169292992 169376079 + MGP_WSBEiJ_P0022527 Cd247 protein_coding protein_coding MGP_WSBEiJ_T0022528.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169364775 169368129 + Cd247 protein_coding retained_intron MGP_WSBEiJ_T0022529.1 MGP_WSBEiJ_G0016106.1 mouse_genomes_project 1 169370483 169383604 + Cd247 protein_coding processed_transcript MGP_WSBEiJ_T0000530.1 MGP_WSBEiJ_G0000475.1 mouse_genomes_project 1 90018558 90020948 + TEC TEC MGP_WSBEiJ_T0020834.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94539920 94568116 + MGP_WSBEiJ_P0020834 Atg4b protein_coding protein_coding MGP_WSBEiJ_T0020835.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94543299 94582044 + MGP_WSBEiJ_P0020835 Atg4b protein_coding protein_coding MGP_WSBEiJ_T0020836.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94543382 94570721 + MGP_WSBEiJ_P0020836 Atg4b protein_coding protein_coding MGP_WSBEiJ_T0020837.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94543429 94576341 + MGP_WSBEiJ_P0020837 Atg4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020838.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94543439 94579597 + Atg4b protein_coding retained_intron MGP_WSBEiJ_T0020839.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94543556 94558505 + Atg4b protein_coding processed_transcript MGP_WSBEiJ_T0020840.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94558481 94567881 + Atg4b protein_coding retained_intron MGP_WSBEiJ_T0020841.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94575760 94576500 + Atg4b protein_coding retained_intron MGP_WSBEiJ_T0020842.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94576214 94579295 + MGP_WSBEiJ_P0020842 Atg4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020843.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94577001 94577999 + Atg4b protein_coding retained_intron MGP_WSBEiJ_T0020844.1 MGP_WSBEiJ_G0015757.1 mouse_genomes_project 1 94577636 94579317 + Atg4b protein_coding retained_intron MGP_WSBEiJ_T0011739.1 MGP_WSBEiJ_G0009869.1 mouse_genomes_project 1 31401132 31402057 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019452.1 MGP_WSBEiJ_G0015487.1 mouse_genomes_project 1 59136375 59144826 - Ica1l protein_coding processed_transcript MGP_WSBEiJ_T0019453.1 MGP_WSBEiJ_G0015487.1 mouse_genomes_project 1 59142961 59202767 - MGP_WSBEiJ_P0019453 Ica1l protein_coding protein_coding MGP_WSBEiJ_T0019454.1 MGP_WSBEiJ_G0015487.1 mouse_genomes_project 1 59142968 59202802 - MGP_WSBEiJ_P0019454 Ica1l protein_coding protein_coding MGP_WSBEiJ_T0019455.1 MGP_WSBEiJ_G0015487.1 mouse_genomes_project 1 59145024 59182473 - MGP_WSBEiJ_P0019455 Ica1l protein_coding protein_coding MGP_WSBEiJ_T0019456.1 MGP_WSBEiJ_G0015487.1 mouse_genomes_project 1 59169475 59176816 - Ica1l protein_coding retained_intron MGP_WSBEiJ_T0000737.1 MGP_WSBEiJ_G0000679.1 mouse_genomes_project 1 184657689 184661430 - TEC TEC MGP_WSBEiJ_T0022952.1 MGP_WSBEiJ_G0016210.1 mouse_genomes_project 1 177058497 177060863 + MGP_WSBEiJ_P0022952 Olfr418 protein_coding protein_coding MGP_WSBEiJ_T0000548.1 MGP_WSBEiJ_G0000493.1 mouse_genomes_project 1 105876147 105879193 + TEC TEC MGP_WSBEiJ_T0011067.1 MGP_WSBEiJ_G0009224.1 mouse_genomes_project 1 195073073 195073386 - Gm23153 misc_RNA misc_RNA MGP_WSBEiJ_T0012028.1 MGP_WSBEiJ_G0010158.1 mouse_genomes_project 1 146808000 146809671 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023239.1 MGP_WSBEiJ_G0016287.1 mouse_genomes_project 1 185279744 185289985 + MGP_WSBEiJ_P0023239 9130409I23Rik protein_coding protein_coding MGP_WSBEiJ_T0011878.1 MGP_WSBEiJ_G0010008.1 mouse_genomes_project 1 75474605 75476186 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022597.1 MGP_WSBEiJ_G0016121.1 mouse_genomes_project 1 170862116 170884025 - MGP_WSBEiJ_P0022597 Mgst3 protein_coding protein_coding MGP_WSBEiJ_T0000722.1 MGP_WSBEiJ_G0000665.1 mouse_genomes_project 1 181028796 181031516 - TEC TEC MGP_WSBEiJ_T0021494.1 MGP_WSBEiJ_G0015904.1 mouse_genomes_project 1 135817747 135828772 - MGP_WSBEiJ_P0021494 Lax1 protein_coding protein_coding MGP_WSBEiJ_T0021495.1 MGP_WSBEiJ_G0015904.1 mouse_genomes_project 1 135819117 135828750 - MGP_WSBEiJ_P0021495 Lax1 protein_coding protein_coding MGP_WSBEiJ_T0002750.1 MGP_WSBEiJ_G0002615.1 mouse_genomes_project 1 60998320 61083484 - Pard3bos1 antisense antisense MGP_WSBEiJ_T0002751.1 MGP_WSBEiJ_G0002615.1 mouse_genomes_project 1 61018734 61083562 - Pard3bos1 antisense antisense MGP_WSBEiJ_T0005730.1 MGP_WSBEiJ_G0004803.1 mouse_genomes_project 1 87410354 87411117 + lincRNA lincRNA MGP_WSBEiJ_T0096891.1 MGP_WSBEiJ_G0035572.1 mouse_genomes_project 1 164925078 164925196 - Gm25488 rRNA rRNA MGP_WSBEiJ_T0002869.1 MGP_WSBEiJ_G0002705.1 mouse_genomes_project 1 168256168 168267497 - Gm32569 antisense antisense MGP_WSBEiJ_T0002870.1 MGP_WSBEiJ_G0002705.1 mouse_genomes_project 1 168256294 168358756 - Gm32569 antisense antisense MGP_WSBEiJ_T0021177.1 MGP_WSBEiJ_G0015834.1 mouse_genomes_project 1 129563369 129582808 + Ccnt2 protein_coding retained_intron MGP_WSBEiJ_T0021178.1 MGP_WSBEiJ_G0015834.1 mouse_genomes_project 1 129563369 129585018 + Ccnt2 protein_coding retained_intron MGP_WSBEiJ_T0021179.1 MGP_WSBEiJ_G0015834.1 mouse_genomes_project 1 129563369 129585018 + Ccnt2 protein_coding retained_intron MGP_WSBEiJ_T0021180.1 MGP_WSBEiJ_G0015834.1 mouse_genomes_project 1 129563369 129588422 + Ccnt2 protein_coding retained_intron MGP_WSBEiJ_T0021181.1 MGP_WSBEiJ_G0015834.1 mouse_genomes_project 1 129563369 129598026 + MGP_WSBEiJ_P0021181 Ccnt2 protein_coding protein_coding MGP_WSBEiJ_T0021182.1 MGP_WSBEiJ_G0015834.1 mouse_genomes_project 1 129563369 129605172 + MGP_WSBEiJ_P0021182 Ccnt2 protein_coding protein_coding MGP_WSBEiJ_T0021183.1 MGP_WSBEiJ_G0015834.1 mouse_genomes_project 1 129586589 129598026 + Ccnt2 protein_coding processed_transcript MGP_WSBEiJ_T0016396.1 MGP_WSBEiJ_G0014514.1 mouse_genomes_project 1 42637608 42657017 - Gm29247 processed_transcript processed_transcript MGP_WSBEiJ_T0016397.1 MGP_WSBEiJ_G0014514.1 mouse_genomes_project 1 42637709 42657762 - Gm29247 processed_transcript processed_transcript MGP_WSBEiJ_T0011760.1 MGP_WSBEiJ_G0009890.1 mouse_genomes_project 1 37502450 37502733 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022143.1 MGP_WSBEiJ_G0016034.1 mouse_genomes_project 1 159776824 159802598 - MGP_WSBEiJ_P0022143 Tor3a protein_coding protein_coding MGP_WSBEiJ_T0022144.1 MGP_WSBEiJ_G0016034.1 mouse_genomes_project 1 159776824 159802598 - MGP_WSBEiJ_P0022144 Tor3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022145.1 MGP_WSBEiJ_G0016034.1 mouse_genomes_project 1 159776824 159802567 - MGP_WSBEiJ_P0022145 Tor3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022146.1 MGP_WSBEiJ_G0016034.1 mouse_genomes_project 1 159778230 159802556 - MGP_WSBEiJ_P0022146 Tor3a protein_coding protein_coding MGP_WSBEiJ_T0022147.1 MGP_WSBEiJ_G0016034.1 mouse_genomes_project 1 159778879 159781666 - Tor3a protein_coding processed_transcript MGP_WSBEiJ_T0022148.1 MGP_WSBEiJ_G0016034.1 mouse_genomes_project 1 159787591 159794286 - Tor3a protein_coding processed_transcript MGP_WSBEiJ_T0022149.1 MGP_WSBEiJ_G0016034.1 mouse_genomes_project 1 159794247 159802577 - MGP_WSBEiJ_P0022149 Tor3a protein_coding protein_coding MGP_WSBEiJ_T0005661.1 MGP_WSBEiJ_G0004750.1 mouse_genomes_project 1 58611541 58615684 - Gm26813 lincRNA lincRNA MGP_WSBEiJ_T0011715.1 MGP_WSBEiJ_G0009845.1 mouse_genomes_project 1 21586219 21587096 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011058.1 MGP_WSBEiJ_G0009215.1 mouse_genomes_project 1 85986109 85986360 + Gm22906 misc_RNA misc_RNA MGP_WSBEiJ_T0000496.1 MGP_WSBEiJ_G0000441.1 mouse_genomes_project 1 79606675 79609665 - TEC TEC MGP_WSBEiJ_T0097582.1 MGP_WSBEiJ_G0036245.1 mouse_genomes_project 1 147582074 147582180 - Gm22681 snRNA snRNA MGP_WSBEiJ_T0018229.1 MGP_WSBEiJ_G0015248.1 mouse_genomes_project 1 7173120 7186651 - MGP_WSBEiJ_P0018229 Cops5 protein_coding protein_coding MGP_WSBEiJ_T0018230.1 MGP_WSBEiJ_G0015248.1 mouse_genomes_project 1 7173362 7183652 - MGP_WSBEiJ_P0018230 Cops5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018231.1 MGP_WSBEiJ_G0015248.1 mouse_genomes_project 1 7175717 7186465 - MGP_WSBEiJ_P0018231 Cops5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018232.1 MGP_WSBEiJ_G0015248.1 mouse_genomes_project 1 7179210 7186673 - MGP_WSBEiJ_P0018232 Cops5 protein_coding protein_coding MGP_WSBEiJ_T0018233.1 MGP_WSBEiJ_G0015248.1 mouse_genomes_project 1 7179443 7186462 - Cops5 protein_coding retained_intron MGP_WSBEiJ_T0018234.1 MGP_WSBEiJ_G0015248.1 mouse_genomes_project 1 7181563 7186692 - Cops5 protein_coding retained_intron MGP_WSBEiJ_T0018235.1 MGP_WSBEiJ_G0015248.1 mouse_genomes_project 1 7185803 7186469 - Cops5 protein_coding retained_intron MGP_WSBEiJ_T0023090.1 MGP_WSBEiJ_G0016258.1 mouse_genomes_project 1 182398605 182401786 + Cox20 protein_coding retained_intron MGP_WSBEiJ_T0023091.1 MGP_WSBEiJ_G0016258.1 mouse_genomes_project 1 182398605 182402144 + MGP_WSBEiJ_P0023091 Cox20 protein_coding protein_coding MGP_WSBEiJ_T0023044.1 MGP_WSBEiJ_G0016248.1 mouse_genomes_project 1 179923390 180253796 - MGP_WSBEiJ_P0023044 Pld5 protein_coding protein_coding MGP_WSBEiJ_T0023045.1 MGP_WSBEiJ_G0016248.1 mouse_genomes_project 1 179923491 180253810 - MGP_WSBEiJ_P0023045 Pld5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023046.1 MGP_WSBEiJ_G0016248.1 mouse_genomes_project 1 179924823 180189056 - MGP_WSBEiJ_P0023046 Pld5 protein_coding protein_coding MGP_WSBEiJ_T0023048.1 MGP_WSBEiJ_G0016248.1 mouse_genomes_project 1 179956390 180253773 - Pld5 protein_coding retained_intron MGP_WSBEiJ_T0023049.1 MGP_WSBEiJ_G0016248.1 mouse_genomes_project 1 180009401 180188955 - Pld5 protein_coding retained_intron MGP_WSBEiJ_T0023050.1 MGP_WSBEiJ_G0016248.1 mouse_genomes_project 1 180239241 180253772 - MGP_WSBEiJ_P0023050 Pld5 protein_coding protein_coding MGP_WSBEiJ_T0023655.1 MGP_WSBEiJ_G0016370.1 mouse_genomes_project 1 198042325 198067376 - MGP_WSBEiJ_P0023655 Camk1g protein_coding protein_coding MGP_WSBEiJ_T0023656.1 MGP_WSBEiJ_G0016370.1 mouse_genomes_project 1 198042325 198067303 - MGP_WSBEiJ_P0023656 Camk1g protein_coding protein_coding MGP_WSBEiJ_T0023657.1 MGP_WSBEiJ_G0016370.1 mouse_genomes_project 1 198044735 198055722 - MGP_WSBEiJ_P0023657 Camk1g protein_coding protein_coding MGP_WSBEiJ_T0023658.1 MGP_WSBEiJ_G0016370.1 mouse_genomes_project 1 198050753 198067323 - Camk1g protein_coding retained_intron MGP_WSBEiJ_T0002851.1 MGP_WSBEiJ_G0002691.1 mouse_genomes_project 1 160077589 160077948 + 4930439D14Rik antisense antisense MGP_WSBEiJ_T0100413.1 MGP_WSBEiJ_G0038872.1 mouse_genomes_project 1 104373115 104420205 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0018645.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362422 34373888 + MGP_WSBEiJ_P0018645 Arid5a protein_coding protein_coding MGP_WSBEiJ_T0018646.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362443 34372973 + Arid5a protein_coding retained_intron MGP_WSBEiJ_T0018647.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362443 34374572 + Arid5a protein_coding retained_intron MGP_WSBEiJ_T0018648.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362443 34373899 + Arid5a protein_coding processed_transcript MGP_WSBEiJ_T0018649.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362443 34375211 + MGP_WSBEiJ_P0018649 Arid5a protein_coding protein_coding MGP_WSBEiJ_T0018650.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362443 34372127 + MGP_WSBEiJ_P0018650 Arid5a protein_coding protein_coding MGP_WSBEiJ_T0018651.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362443 34378714 + MGP_WSBEiJ_P0018651 Arid5a protein_coding protein_coding MGP_WSBEiJ_T0018652.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362443 34375213 + MGP_WSBEiJ_P0018652 Arid5a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0018653.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362443 34375756 + MGP_WSBEiJ_P0018653 Arid5a protein_coding protein_coding MGP_WSBEiJ_T0018654.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362447 34367458 + Arid5a protein_coding retained_intron MGP_WSBEiJ_T0018655.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362468 34371264 + Arid5a protein_coding retained_intron MGP_WSBEiJ_T0018656.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34362522 34374888 + MGP_WSBEiJ_P0018656 Arid5a protein_coding protein_coding MGP_WSBEiJ_T0018657.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34370681 34372821 + Arid5a protein_coding retained_intron MGP_WSBEiJ_T0018658.1 MGP_WSBEiJ_G0015334.1 mouse_genomes_project 1 34371711 34372817 + Arid5a protein_coding retained_intron MGP_WSBEiJ_T0019561.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62763978 62902746 + MGP_WSBEiJ_P0019561 Adam23 protein_coding protein_coding MGP_WSBEiJ_T0019562.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62763982 62925811 + MGP_WSBEiJ_P0019562 Adam23 protein_coding protein_coding MGP_WSBEiJ_T0019563.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62763997 62898704 + Adam23 protein_coding retained_intron MGP_WSBEiJ_T0019564.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62764022 62859152 + Adam23 protein_coding retained_intron MGP_WSBEiJ_T0019565.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62764298 62922376 + MGP_WSBEiJ_P0019565 Adam23 protein_coding protein_coding MGP_WSBEiJ_T0019566.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62764298 62925811 + MGP_WSBEiJ_P0019566 Adam23 protein_coding protein_coding MGP_WSBEiJ_T0019567.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62791145 62871589 + Adam23 protein_coding processed_transcript MGP_WSBEiJ_T0019568.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62816583 62925811 + Adam23 protein_coding processed_transcript MGP_WSBEiJ_T0019569.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62863274 62866779 + Adam23 protein_coding retained_intron MGP_WSBEiJ_T0019570.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62881747 62896517 + Adam23 protein_coding retained_intron MGP_WSBEiJ_T0019571.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62908233 62911610 + Adam23 protein_coding retained_intron MGP_WSBEiJ_T0019572.1 MGP_WSBEiJ_G0015504.1 mouse_genomes_project 1 62914449 62922270 + Adam23 protein_coding retained_intron MGP_WSBEiJ_T0020200.1 MGP_WSBEiJ_G0015622.1 mouse_genomes_project 1 79787920 79857821 - MGP_WSBEiJ_P0020200 Serpine2 protein_coding protein_coding MGP_WSBEiJ_T0020201.1 MGP_WSBEiJ_G0015622.1 mouse_genomes_project 1 79790585 79816649 - MGP_WSBEiJ_P0020201 Serpine2 protein_coding protein_coding MGP_WSBEiJ_T0020202.1 MGP_WSBEiJ_G0015622.1 mouse_genomes_project 1 79797154 79860299 - MGP_WSBEiJ_P0020202 Serpine2 protein_coding protein_coding MGP_WSBEiJ_T0020203.1 MGP_WSBEiJ_G0015622.1 mouse_genomes_project 1 79810449 79857821 - Serpine2 protein_coding retained_intron MGP_WSBEiJ_T0020204.1 MGP_WSBEiJ_G0015622.1 mouse_genomes_project 1 79812247 79815631 - Serpine2 protein_coding retained_intron MGP_WSBEiJ_T0020205.1 MGP_WSBEiJ_G0015622.1 mouse_genomes_project 1 79856632 79857761 - Serpine2 protein_coding retained_intron MGP_WSBEiJ_T0002725.1 MGP_WSBEiJ_G0002596.1 mouse_genomes_project 1 38863340 38874462 - Gm35801 antisense antisense MGP_WSBEiJ_T0002726.1 MGP_WSBEiJ_G0002596.1 mouse_genomes_project 1 38863360 38874448 - Gm35801 antisense antisense MGP_WSBEiJ_T0097552.1 MGP_WSBEiJ_G0036215.1 mouse_genomes_project 1 74047501 74047608 + Gm25524 snRNA snRNA MGP_WSBEiJ_T0019841.1 MGP_WSBEiJ_G0015563.1 mouse_genomes_project 1 74205589 74212555 + MGP_WSBEiJ_P0019841 Catip protein_coding protein_coding MGP_WSBEiJ_T0019842.1 MGP_WSBEiJ_G0015563.1 mouse_genomes_project 1 74205847 74211032 + MGP_WSBEiJ_P0019842 Catip protein_coding protein_coding MGP_WSBEiJ_T0019843.1 MGP_WSBEiJ_G0015563.1 mouse_genomes_project 1 74205923 74212384 + MGP_WSBEiJ_P0019843 Catip protein_coding protein_coding MGP_WSBEiJ_T0019844.1 MGP_WSBEiJ_G0015563.1 mouse_genomes_project 1 74208012 74209975 + Catip protein_coding retained_intron MGP_WSBEiJ_T0005660.1 MGP_WSBEiJ_G0004749.1 mouse_genomes_project 1 58493843 58507097 + Gm29016 lincRNA lincRNA MGP_WSBEiJ_T0018873.1 MGP_WSBEiJ_G0015375.1 mouse_genomes_project 1 37923291 37982520 - MGP_WSBEiJ_P0018873 Rfx8 protein_coding protein_coding MGP_WSBEiJ_T0018874.1 MGP_WSBEiJ_G0015375.1 mouse_genomes_project 1 37938936 37949856 - Rfx8 protein_coding processed_transcript MGP_WSBEiJ_T0011902.1 MGP_WSBEiJ_G0010032.1 mouse_genomes_project 1 87431047 87431677 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023129.1 MGP_WSBEiJ_G0016268.1 mouse_genomes_project 1 183844260 183899769 - MGP_WSBEiJ_P0023129 Gm1305 protein_coding protein_coding MGP_WSBEiJ_T0023139.1 MGP_WSBEiJ_G0016270.1 mouse_genomes_project 1 183960785 183962086 + MGP_WSBEiJ_P0023139 Gm10518 protein_coding protein_coding MGP_WSBEiJ_T0023047.1 MGP_WSBEiJ_G0016249.1 mouse_genomes_project 1 179941372 179943504 - MGP_WSBEiJ_P0023047 Rbm8a2 protein_coding protein_coding MGP_WSBEiJ_T0018397.1 MGP_WSBEiJ_G0015277.1 mouse_genomes_project 1 14882732 14913751 + MGP_WSBEiJ_P0018397 Pi15 protein_coding protein_coding MGP_WSBEiJ_T0011657.1 MGP_WSBEiJ_G0009787.1 mouse_genomes_project 1 3426529 3427002 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018491.1 MGP_WSBEiJ_G0015304.1 mouse_genomes_project 1 22173821 22203894 + MGP_WSBEiJ_P0018491 Lmbrd1 protein_coding protein_coding MGP_WSBEiJ_T0018492.1 MGP_WSBEiJ_G0015304.1 mouse_genomes_project 1 22173915 22228405 + MGP_WSBEiJ_P0018492 Lmbrd1 protein_coding protein_coding MGP_WSBEiJ_T0018493.1 MGP_WSBEiJ_G0015304.1 mouse_genomes_project 1 22173933 22265774 + MGP_WSBEiJ_P0018493 Lmbrd1 protein_coding protein_coding MGP_WSBEiJ_T0018494.1 MGP_WSBEiJ_G0015304.1 mouse_genomes_project 1 22225162 22242362 + Lmbrd1 protein_coding retained_intron MGP_WSBEiJ_T0018495.1 MGP_WSBEiJ_G0015304.1 mouse_genomes_project 1 22242286 22261882 + MGP_WSBEiJ_P0018495 Lmbrd1 protein_coding protein_coding MGP_WSBEiJ_T0002890.1 MGP_WSBEiJ_G0002722.1 mouse_genomes_project 1 180911827 180916540 - Gm15423 antisense antisense MGP_WSBEiJ_T0011857.1 MGP_WSBEiJ_G0009987.1 mouse_genomes_project 1 64837993 64838301 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011856.1 MGP_WSBEiJ_G0009986.1 mouse_genomes_project 1 64801776 64802098 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022846.1 MGP_WSBEiJ_G0016182.1 mouse_genomes_project 1 175809695 175827803 - MGP_WSBEiJ_P0022846 Ncstn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022847.1 MGP_WSBEiJ_G0016182.1 mouse_genomes_project 1 175809695 175827803 - MGP_WSBEiJ_P0022847 Ncstn protein_coding protein_coding MGP_WSBEiJ_T0022848.1 MGP_WSBEiJ_G0016182.1 mouse_genomes_project 1 175809695 175827803 - MGP_WSBEiJ_P0022848 Ncstn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022849.1 MGP_WSBEiJ_G0016182.1 mouse_genomes_project 1 175810382 175811747 - Ncstn protein_coding retained_intron MGP_WSBEiJ_T0022850.1 MGP_WSBEiJ_G0016182.1 mouse_genomes_project 1 175811552 175814950 - Ncstn protein_coding retained_intron MGP_WSBEiJ_T0022851.1 MGP_WSBEiJ_G0016182.1 mouse_genomes_project 1 175825742 175827803 - Ncstn protein_coding retained_intron MGP_WSBEiJ_T0002845.1 MGP_WSBEiJ_G0002685.1 mouse_genomes_project 1 154789068 154801540 + Gm28610 antisense antisense MGP_WSBEiJ_T0005640.1 MGP_WSBEiJ_G0004735.1 mouse_genomes_project 1 49643286 49644561 + Gm28322 lincRNA lincRNA MGP_WSBEiJ_T0018129.1 MGP_WSBEiJ_G0015231.1 mouse_genomes_project 1 2140429 2230632 + MGP_WSBEiJ_P0018129 Atp6v1h protein_coding protein_coding MGP_WSBEiJ_T0018130.1 MGP_WSBEiJ_G0015231.1 mouse_genomes_project 1 2152247 2230821 + MGP_WSBEiJ_P0018130 Atp6v1h protein_coding protein_coding MGP_WSBEiJ_T0018131.1 MGP_WSBEiJ_G0015231.1 mouse_genomes_project 1 2152277 2165451 + MGP_WSBEiJ_P0018131 Atp6v1h protein_coding protein_coding MGP_WSBEiJ_T0018132.1 MGP_WSBEiJ_G0015231.1 mouse_genomes_project 1 2152291 2212308 + Atp6v1h protein_coding retained_intron MGP_WSBEiJ_T0018133.1 MGP_WSBEiJ_G0015231.1 mouse_genomes_project 1 2152299 2156435 + Atp6v1h protein_coding retained_intron MGP_WSBEiJ_T0018134.1 MGP_WSBEiJ_G0015231.1 mouse_genomes_project 1 2152299 2165382 + MGP_WSBEiJ_P0018134 Atp6v1h protein_coding protein_coding MGP_WSBEiJ_T0018135.1 MGP_WSBEiJ_G0015231.1 mouse_genomes_project 1 2152321 2230711 + MGP_WSBEiJ_P0018135 Atp6v1h protein_coding protein_coding MGP_WSBEiJ_T0018136.1 MGP_WSBEiJ_G0015231.1 mouse_genomes_project 1 2152331 2169501 + Atp6v1h protein_coding retained_intron MGP_WSBEiJ_T0019825.1 MGP_WSBEiJ_G0015561.1 mouse_genomes_project 1 74125011 74127535 + MGP_WSBEiJ_P0019825 Pnkd protein_coding protein_coding MGP_WSBEiJ_T0019826.1 MGP_WSBEiJ_G0015561.1 mouse_genomes_project 1 74125126 74197199 + MGP_WSBEiJ_P0019826 Pnkd protein_coding protein_coding MGP_WSBEiJ_T0019827.1 MGP_WSBEiJ_G0015561.1 mouse_genomes_project 1 74125131 74126715 + Pnkd protein_coding retained_intron MGP_WSBEiJ_T0019828.1 MGP_WSBEiJ_G0015561.1 mouse_genomes_project 1 74125135 74191093 + Pnkd protein_coding retained_intron MGP_WSBEiJ_T0019829.1 MGP_WSBEiJ_G0015561.1 mouse_genomes_project 1 74125136 74197209 + MGP_WSBEiJ_P0019829 Pnkd protein_coding protein_coding MGP_WSBEiJ_T0019830.1 MGP_WSBEiJ_G0015561.1 mouse_genomes_project 1 74125858 74127354 + Pnkd protein_coding retained_intron MGP_WSBEiJ_T0019839.1 MGP_WSBEiJ_G0015561.1 mouse_genomes_project 1 74174793 74197201 + MGP_WSBEiJ_P0019839 Pnkd protein_coding protein_coding MGP_WSBEiJ_T0019840.1 MGP_WSBEiJ_G0015561.1 mouse_genomes_project 1 74174846 74178445 + Pnkd protein_coding retained_intron MGP_WSBEiJ_T0000577.1 MGP_WSBEiJ_G0000522.1 mouse_genomes_project 1 127802341 127803663 - TEC TEC MGP_WSBEiJ_T0098756.1 MGP_WSBEiJ_G0037419.1 mouse_genomes_project 1 58822744 58822831 + Snord70 snoRNA snoRNA MGP_WSBEiJ_T0011725.1 MGP_WSBEiJ_G0009855.1 mouse_genomes_project 1 26467719 26470204 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019611.1 MGP_WSBEiJ_G0015515.1 mouse_genomes_project 1 64358105 64379914 - MGP_WSBEiJ_P0019611 Akr1cl protein_coding protein_coding MGP_WSBEiJ_T0019612.1 MGP_WSBEiJ_G0015515.1 mouse_genomes_project 1 64358105 64379926 - MGP_WSBEiJ_P0019612 Akr1cl protein_coding protein_coding MGP_WSBEiJ_T0019613.1 MGP_WSBEiJ_G0015515.1 mouse_genomes_project 1 64359886 64361960 - Akr1cl protein_coding retained_intron MGP_WSBEiJ_T0019614.1 MGP_WSBEiJ_G0015515.1 mouse_genomes_project 1 64361484 64379853 - MGP_WSBEiJ_P0019614 Akr1cl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0019615.1 MGP_WSBEiJ_G0015515.1 mouse_genomes_project 1 64374856 64379899 - Akr1cl protein_coding processed_transcript MGP_WSBEiJ_T0019616.1 MGP_WSBEiJ_G0015515.1 mouse_genomes_project 1 64376698 64379915 - Akr1cl protein_coding retained_intron MGP_WSBEiJ_T0019201.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53502480 53505754 - Ankrd44 protein_coding retained_intron MGP_WSBEiJ_T0019202.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53502480 53791199 - MGP_WSBEiJ_P0019202 Ankrd44 protein_coding protein_coding MGP_WSBEiJ_T0019203.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53502482 53791199 - MGP_WSBEiJ_P0019203 Ankrd44 protein_coding protein_coding MGP_WSBEiJ_T0019204.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53506237 53516605 - MGP_WSBEiJ_P0019204 Ankrd44 protein_coding protein_coding MGP_WSBEiJ_T0019205.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53508809 53624302 - MGP_WSBEiJ_P0019205 Ankrd44 protein_coding protein_coding MGP_WSBEiJ_T0019206.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53512039 53547895 - Ankrd44 protein_coding retained_intron MGP_WSBEiJ_T0019207.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53525639 53581746 - Ankrd44 protein_coding retained_intron MGP_WSBEiJ_T0019208.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53581237 53584004 - Ankrd44 protein_coding retained_intron MGP_WSBEiJ_T0019209.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53588732 53595377 - Ankrd44 protein_coding retained_intron MGP_WSBEiJ_T0019210.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53595036 53791166 - Ankrd44 protein_coding retained_intron MGP_WSBEiJ_T0019211.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53603032 53626997 - Ankrd44 protein_coding retained_intron MGP_WSBEiJ_T0019212.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53621155 53629385 - Ankrd44 protein_coding processed_transcript MGP_WSBEiJ_T0019213.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53621473 53791199 - Ankrd44 protein_coding retained_intron MGP_WSBEiJ_T0019214.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53622953 53680975 - Ankrd44 protein_coding processed_transcript MGP_WSBEiJ_T0019215.1 MGP_WSBEiJ_G0015442.1 mouse_genomes_project 1 53627365 53756119 - MGP_WSBEiJ_P0019215 Ankrd44 protein_coding protein_coding MGP_WSBEiJ_T0000462.1 MGP_WSBEiJ_G0000407.1 mouse_genomes_project 1 60884258 60886995 + TEC TEC MGP_WSBEiJ_T0005853.1 MGP_WSBEiJ_G0004906.1 mouse_genomes_project 1 156743402 156762919 - C230024C17Rik lincRNA lincRNA MGP_WSBEiJ_T0023119.1 MGP_WSBEiJ_G0016266.1 mouse_genomes_project 1 183703490 183783850 + MGP_WSBEiJ_P0023119 Cnst protein_coding protein_coding MGP_WSBEiJ_T0023120.1 MGP_WSBEiJ_G0016266.1 mouse_genomes_project 1 183703619 183741213 + Cnst protein_coding retained_intron MGP_WSBEiJ_T0023121.1 MGP_WSBEiJ_G0016266.1 mouse_genomes_project 1 183703629 183760412 + Cnst protein_coding retained_intron MGP_WSBEiJ_T0023122.1 MGP_WSBEiJ_G0016266.1 mouse_genomes_project 1 183751692 183762530 + Cnst protein_coding processed_transcript MGP_WSBEiJ_T0009416.1 MGP_WSBEiJ_G0007573.1 mouse_genomes_project 1 196696634 196696715 - Mir3473c miRNA miRNA MGP_WSBEiJ_T0011837.1 MGP_WSBEiJ_G0009967.1 mouse_genomes_project 1 59998671 59999498 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000598.1 MGP_WSBEiJ_G0000543.1 mouse_genomes_project 1 133928479 133930390 + TEC TEC MGP_WSBEiJ_T0012109.1 MGP_WSBEiJ_G0010239.1 mouse_genomes_project 1 182858190 182858664 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005642.1 MGP_WSBEiJ_G0004737.1 mouse_genomes_project 1 50213101 50214101 - 1700072G22Rik lincRNA lincRNA MGP_WSBEiJ_T0022890.1 MGP_WSBEiJ_G0016190.1 mouse_genomes_project 1 176026164 176052515 - MGP_WSBEiJ_P0022890 Atp1a2 protein_coding protein_coding MGP_WSBEiJ_T0022891.1 MGP_WSBEiJ_G0016190.1 mouse_genomes_project 1 176029018 176052515 - Atp1a2 protein_coding retained_intron MGP_WSBEiJ_T0022892.1 MGP_WSBEiJ_G0016190.1 mouse_genomes_project 1 176030372 176030907 - Atp1a2 protein_coding retained_intron MGP_WSBEiJ_T0022893.1 MGP_WSBEiJ_G0016190.1 mouse_genomes_project 1 176032510 176052515 - MGP_WSBEiJ_P0022893 Atp1a2 protein_coding protein_coding MGP_WSBEiJ_T0022894.1 MGP_WSBEiJ_G0016190.1 mouse_genomes_project 1 176038722 176052515 - Atp1a2 protein_coding retained_intron MGP_WSBEiJ_T0020028.1 MGP_WSBEiJ_G0015594.1 mouse_genomes_project 1 75049045 75054112 - MGP_WSBEiJ_P0020028 Tuba4a protein_coding protein_coding MGP_WSBEiJ_T0020029.1 MGP_WSBEiJ_G0015594.1 mouse_genomes_project 1 75049789 75053442 - MGP_WSBEiJ_P0020029 Tuba4a protein_coding protein_coding MGP_WSBEiJ_T0020030.1 MGP_WSBEiJ_G0015594.1 mouse_genomes_project 1 75050429 75052252 - MGP_WSBEiJ_P0020030 Tuba4a protein_coding protein_coding MGP_WSBEiJ_T0020031.1 MGP_WSBEiJ_G0015594.1 mouse_genomes_project 1 75050773 75052232 - MGP_WSBEiJ_P0020031 Tuba4a protein_coding protein_coding MGP_WSBEiJ_T0020032.1 MGP_WSBEiJ_G0015594.1 mouse_genomes_project 1 75051252 75054061 - Tuba4a protein_coding retained_intron MGP_WSBEiJ_T0020033.1 MGP_WSBEiJ_G0015594.1 mouse_genomes_project 1 75051674 75054683 - MGP_WSBEiJ_P0020033 Tuba4a protein_coding protein_coding MGP_WSBEiJ_T0020034.1 MGP_WSBEiJ_G0015594.1 mouse_genomes_project 1 75051706 75053706 - MGP_WSBEiJ_P0020034 Tuba4a protein_coding protein_coding MGP_WSBEiJ_T0020035.1 MGP_WSBEiJ_G0015594.1 mouse_genomes_project 1 75051730 75053706 - MGP_WSBEiJ_P0020035 Tuba4a protein_coding protein_coding MGP_WSBEiJ_T0005896.1 MGP_WSBEiJ_G0004939.1 mouse_genomes_project 1 170469634 170473915 - lincRNA lincRNA MGP_WSBEiJ_T0000429.1 MGP_WSBEiJ_G0000374.1 mouse_genomes_project 1 38368745 38371815 + TEC TEC MGP_WSBEiJ_T0018408.1 MGP_WSBEiJ_G0015282.1 mouse_genomes_project 1 16443567 16505669 + MGP_WSBEiJ_P0018408 Tfap2d protein_coding protein_coding MGP_WSBEiJ_T0018409.1 MGP_WSBEiJ_G0015282.1 mouse_genomes_project 1 16451306 16486551 + Tfap2d protein_coding processed_transcript MGP_WSBEiJ_T0000590.1 MGP_WSBEiJ_G0000535.1 mouse_genomes_project 1 131702595 131706428 + TEC TEC MGP_WSBEiJ_T0098800.1 MGP_WSBEiJ_G0037463.1 mouse_genomes_project 1 156436510 156436650 + Gm25588 snoRNA snoRNA MGP_WSBEiJ_T0002906.1 MGP_WSBEiJ_G0002735.1 mouse_genomes_project 1 189776160 189789404 - 9630028B13Rik antisense antisense MGP_WSBEiJ_T0011874.1 MGP_WSBEiJ_G0010004.1 mouse_genomes_project 1 73124487 73124821 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011060.1 MGP_WSBEiJ_G0009217.1 mouse_genomes_project 1 105578993 105579323 + Gm23537 misc_RNA misc_RNA MGP_WSBEiJ_T0019729.1 MGP_WSBEiJ_G0015538.1 mouse_genomes_project 1 70384295 70547030 + MGP_WSBEiJ_P0019729 Vwc2l protein_coding protein_coding MGP_WSBEiJ_T0019730.1 MGP_WSBEiJ_G0015538.1 mouse_genomes_project 1 70384332 70390783 + Vwc2l protein_coding retained_intron MGP_WSBEiJ_T0019731.1 MGP_WSBEiJ_G0015538.1 mouse_genomes_project 1 70384482 70547015 + MGP_WSBEiJ_P0019731 Vwc2l protein_coding protein_coding MGP_WSBEiJ_T0019732.1 MGP_WSBEiJ_G0015538.1 mouse_genomes_project 1 70384503 70544123 + MGP_WSBEiJ_P0019732 Vwc2l protein_coding protein_coding MGP_WSBEiJ_T0018095.1 MGP_WSBEiJ_G0015224.1 mouse_genomes_project 1 1320707 1396655 - MGP_WSBEiJ_P0018095 protein_coding protein_coding MGP_WSBEiJ_T0018096.1 MGP_WSBEiJ_G0015224.1 mouse_genomes_project 1 1387975 1404121 - MGP_WSBEiJ_P0018096 protein_coding protein_coding MGP_WSBEiJ_T0100388.1 MGP_WSBEiJ_G0038847.1 mouse_genomes_project 1 22113546 22114037 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0018337.1 MGP_WSBEiJ_G0015264.1 mouse_genomes_project 1 12516383 12958185 + MGP_WSBEiJ_P0018337 Kcnb2 protein_coding protein_coding MGP_WSBEiJ_T0018338.1 MGP_WSBEiJ_G0015264.1 mouse_genomes_project 1 12543538 12969379 + MGP_WSBEiJ_P0018338 Kcnb2 protein_coding protein_coding MGP_WSBEiJ_T0100445.1 MGP_WSBEiJ_G0038904.1 mouse_genomes_project 1 185692023 185692701 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000446.1 MGP_WSBEiJ_G0000391.1 mouse_genomes_project 1 53927248 53929042 - TEC TEC MGP_WSBEiJ_T0005914.1 MGP_WSBEiJ_G0004955.1 mouse_genomes_project 1 184961475 184966475 - Gm38293 lincRNA lincRNA MGP_WSBEiJ_T0023005.1 MGP_WSBEiJ_G0016239.1 mouse_genomes_project 1 178784387 178877460 - MGP_WSBEiJ_P0023005 Grem2 protein_coding protein_coding MGP_WSBEiJ_T0005828.1 MGP_WSBEiJ_G0004887.1 mouse_genomes_project 1 138942661 138945047 - 4933409D19Rik lincRNA lincRNA MGP_WSBEiJ_T0020815.1 MGP_WSBEiJ_G0015753.1 mouse_genomes_project 1 94278087 94395954 + MGP_WSBEiJ_P0020815 Farp2 protein_coding protein_coding MGP_WSBEiJ_T0020816.1 MGP_WSBEiJ_G0015753.1 mouse_genomes_project 1 94278120 94353024 + MGP_WSBEiJ_P0020816 Farp2 protein_coding protein_coding MGP_WSBEiJ_T0021553.1 MGP_WSBEiJ_G0015919.1 mouse_genomes_project 1 136604073 136622025 + MGP_WSBEiJ_P0021553 Adipor1 protein_coding protein_coding MGP_WSBEiJ_T0021554.1 MGP_WSBEiJ_G0015919.1 mouse_genomes_project 1 136604151 136622022 + MGP_WSBEiJ_P0021554 Adipor1 protein_coding protein_coding MGP_WSBEiJ_T0021555.1 MGP_WSBEiJ_G0015919.1 mouse_genomes_project 1 136604166 136604636 + Adipor1 protein_coding processed_transcript MGP_WSBEiJ_T0021556.1 MGP_WSBEiJ_G0015919.1 mouse_genomes_project 1 136604259 136615586 + Adipor1 protein_coding retained_intron MGP_WSBEiJ_T0022954.1 MGP_WSBEiJ_G0016212.1 mouse_genomes_project 1 177067092 177070472 - MGP_WSBEiJ_P0022954 protein_coding protein_coding MGP_WSBEiJ_T0016446.1 MGP_WSBEiJ_G0014531.1 mouse_genomes_project 1 138738409 138742013 - 9230116N13Rik processed_transcript antisense MGP_WSBEiJ_T0016447.1 MGP_WSBEiJ_G0014531.1 mouse_genomes_project 1 138739336 138741988 - 9230116N13Rik processed_transcript retained_intron MGP_WSBEiJ_T0009357.1 MGP_WSBEiJ_G0007514.1 mouse_genomes_project 1 75044429 75044545 - Gm27943 miRNA miRNA MGP_WSBEiJ_T0012036.1 MGP_WSBEiJ_G0010166.1 mouse_genomes_project 1 151431971 151432758 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099975.1 MGP_WSBEiJ_G0038633.1 mouse_genomes_project 1 159971772 159974405 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099976.1 MGP_WSBEiJ_G0038633.1 mouse_genomes_project 1 159972094 159972421 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0019831.1 MGP_WSBEiJ_G0015562.1 mouse_genomes_project 1 74128327 74144503 - MGP_WSBEiJ_P0019831 Tmbim1 protein_coding protein_coding MGP_WSBEiJ_T0019832.1 MGP_WSBEiJ_G0015562.1 mouse_genomes_project 1 74128331 74144449 - Tmbim1 protein_coding retained_intron MGP_WSBEiJ_T0019833.1 MGP_WSBEiJ_G0015562.1 mouse_genomes_project 1 74128331 74135804 - Tmbim1 protein_coding retained_intron MGP_WSBEiJ_T0019834.1 MGP_WSBEiJ_G0015562.1 mouse_genomes_project 1 74128333 74144459 - MGP_WSBEiJ_P0019834 Tmbim1 protein_coding protein_coding MGP_WSBEiJ_T0019835.1 MGP_WSBEiJ_G0015562.1 mouse_genomes_project 1 74129380 74131305 - MGP_WSBEiJ_P0019835 Tmbim1 protein_coding protein_coding MGP_WSBEiJ_T0019836.1 MGP_WSBEiJ_G0015562.1 mouse_genomes_project 1 74133639 74144313 - Tmbim1 protein_coding processed_transcript MGP_WSBEiJ_T0019837.1 MGP_WSBEiJ_G0015562.1 mouse_genomes_project 1 74133987 74145720 - MGP_WSBEiJ_P0019837 Tmbim1 protein_coding protein_coding MGP_WSBEiJ_T0019838.1 MGP_WSBEiJ_G0015562.1 mouse_genomes_project 1 74134004 74144218 - MGP_WSBEiJ_P0019838 Tmbim1 protein_coding protein_coding MGP_WSBEiJ_T0018158.1 MGP_WSBEiJ_G0015235.1 mouse_genomes_project 1 3401051 3439957 + MGP_WSBEiJ_P0018158 Fam150a protein_coding protein_coding MGP_WSBEiJ_T0097527.1 MGP_WSBEiJ_G0036190.1 mouse_genomes_project 1 30087961 30088068 - Gm25814 snRNA snRNA MGP_WSBEiJ_T0000624.1 MGP_WSBEiJ_G0000567.1 mouse_genomes_project 1 140584820 140590631 - TEC TEC MGP_WSBEiJ_T0022879.1 MGP_WSBEiJ_G0016186.1 mouse_genomes_project 1 175949937 175960878 - MGP_WSBEiJ_P0022879 Pea15a protein_coding protein_coding MGP_WSBEiJ_T0022880.1 MGP_WSBEiJ_G0016186.1 mouse_genomes_project 1 175949937 175960878 - MGP_WSBEiJ_P0022880 Pea15a protein_coding protein_coding MGP_WSBEiJ_T0022881.1 MGP_WSBEiJ_G0016186.1 mouse_genomes_project 1 175951625 175953938 - Pea15a protein_coding processed_transcript MGP_WSBEiJ_T0022882.1 MGP_WSBEiJ_G0016186.1 mouse_genomes_project 1 175953283 175960771 - MGP_WSBEiJ_P0022882 Pea15a protein_coding protein_coding MGP_WSBEiJ_T0022883.1 MGP_WSBEiJ_G0016186.1 mouse_genomes_project 1 175953897 175960878 - Pea15a protein_coding retained_intron MGP_WSBEiJ_T0022451.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167745854 167884113 + MGP_WSBEiJ_P0022451 Nme7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022453.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167749406 167883688 + MGP_WSBEiJ_P0022453 Nme7 protein_coding protein_coding MGP_WSBEiJ_T0022454.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167749461 167792878 + Nme7 protein_coding processed_transcript MGP_WSBEiJ_T0022455.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167749482 167754886 + Nme7 protein_coding retained_intron MGP_WSBEiJ_T0022456.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167749808 167883682 + MGP_WSBEiJ_P0022456 Nme7 protein_coding protein_coding MGP_WSBEiJ_T0022457.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167749832 167777979 + Nme7 protein_coding retained_intron MGP_WSBEiJ_T0022458.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167754597 167791507 + MGP_WSBEiJ_P0022458 Nme7 protein_coding protein_coding MGP_WSBEiJ_T0022459.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167788850 167825860 + Nme7 protein_coding retained_intron MGP_WSBEiJ_T0022460.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167817644 167883624 + Nme7 protein_coding processed_transcript MGP_WSBEiJ_T0022461.1 MGP_WSBEiJ_G0016092.1 mouse_genomes_project 1 167817644 167883680 + Nme7 protein_coding processed_transcript MGP_WSBEiJ_T0023443.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193481478 193517915 - MGP_WSBEiJ_P0023443 Kctd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023444.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193481478 193517927 - MGP_WSBEiJ_P0023444 Kctd3 protein_coding protein_coding MGP_WSBEiJ_T0023445.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193482824 193484701 - Kctd3 protein_coding retained_intron MGP_WSBEiJ_T0023446.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193482936 193489077 - MGP_WSBEiJ_P0023446 Kctd3 protein_coding protein_coding MGP_WSBEiJ_T0023447.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193482979 193484200 - Kctd3 protein_coding retained_intron MGP_WSBEiJ_T0023448.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193484261 193487090 - Kctd3 protein_coding processed_transcript MGP_WSBEiJ_T0023449.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193489027 193492287 - Kctd3 protein_coding retained_intron MGP_WSBEiJ_T0023450.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193491277 193517928 - Kctd3 protein_coding retained_intron MGP_WSBEiJ_T0023451.1 MGP_WSBEiJ_G0016332.1 mouse_genomes_project 1 193505372 193507801 - Kctd3 protein_coding retained_intron MGP_WSBEiJ_T0002860.1 MGP_WSBEiJ_G0002699.1 mouse_genomes_project 1 165354808 165420932 + Gm38304 antisense antisense MGP_WSBEiJ_T0000610.1 MGP_WSBEiJ_G0000554.1 mouse_genomes_project 1 137766128 137767142 - TEC TEC MGP_WSBEiJ_T0000376.1 MGP_WSBEiJ_G0000322.1 mouse_genomes_project 1 21560486 21563292 + TEC TEC MGP_WSBEiJ_T0009393.1 MGP_WSBEiJ_G0007550.1 mouse_genomes_project 1 156938891 156939002 + Mir8114 miRNA miRNA MGP_WSBEiJ_T0020575.1 MGP_WSBEiJ_G0015703.1 mouse_genomes_project 1 90774783 90787533 + MGP_WSBEiJ_P0020575 Ackr3 protein_coding protein_coding MGP_WSBEiJ_T0020576.1 MGP_WSBEiJ_G0015703.1 mouse_genomes_project 1 90774809 90784627 + MGP_WSBEiJ_P0020576 Ackr3 protein_coding protein_coding MGP_WSBEiJ_T0000556.1 MGP_WSBEiJ_G0000501.1 mouse_genomes_project 1 112206498 112210198 - TEC TEC MGP_WSBEiJ_T0019845.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74218425 74230918 + MGP_WSBEiJ_P0019845 Slc11a1 protein_coding protein_coding MGP_WSBEiJ_T0019846.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74218433 74231215 + Slc11a1 protein_coding retained_intron MGP_WSBEiJ_T0019847.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74218433 74231225 + MGP_WSBEiJ_P0019847 Slc11a1 protein_coding protein_coding MGP_WSBEiJ_T0019848.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74218455 74231214 + Slc11a1 protein_coding retained_intron MGP_WSBEiJ_T0019849.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74218483 74227027 + Slc11a1 protein_coding processed_transcript MGP_WSBEiJ_T0019850.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74218802 74220121 + Slc11a1 protein_coding processed_transcript MGP_WSBEiJ_T0019851.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74219887 74224015 + Slc11a1 protein_coding processed_transcript MGP_WSBEiJ_T0019852.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74226851 74229336 + Slc11a1 protein_coding retained_intron MGP_WSBEiJ_T0019853.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74228196 74228997 + Slc11a1 protein_coding retained_intron MGP_WSBEiJ_T0019854.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74228503 74229336 + Slc11a1 protein_coding processed_transcript MGP_WSBEiJ_T0019855.1 MGP_WSBEiJ_G0015564.1 mouse_genomes_project 1 74228762 74230360 + Slc11a1 protein_coding processed_transcript MGP_WSBEiJ_T0011826.1 MGP_WSBEiJ_G0009956.1 mouse_genomes_project 1 57650565 57765021 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020823.1 MGP_WSBEiJ_G0015755.1 mouse_genomes_project 1 94464541 94474583 + MGP_WSBEiJ_P0020823 Bok protein_coding protein_coding MGP_WSBEiJ_T0020824.1 MGP_WSBEiJ_G0015755.1 mouse_genomes_project 1 94464583 94474029 + MGP_WSBEiJ_P0020824 Bok protein_coding protein_coding MGP_WSBEiJ_T0020825.1 MGP_WSBEiJ_G0015755.1 mouse_genomes_project 1 94465144 94472939 + MGP_WSBEiJ_P0020825 Bok protein_coding protein_coding MGP_WSBEiJ_T0020826.1 MGP_WSBEiJ_G0015755.1 mouse_genomes_project 1 94468087 94474288 + MGP_WSBEiJ_P0020826 Bok protein_coding protein_coding MGP_WSBEiJ_T0020827.1 MGP_WSBEiJ_G0015755.1 mouse_genomes_project 1 94472684 94474274 + Bok protein_coding processed_transcript MGP_WSBEiJ_T0000484.1 MGP_WSBEiJ_G0000429.1 mouse_genomes_project 1 69925317 69928611 - TEC TEC MGP_WSBEiJ_T0022281.1 MGP_WSBEiJ_G0016055.1 mouse_genomes_project 1 164401852 164432967 - MGP_WSBEiJ_P0022281 Dars2 protein_coding protein_coding MGP_WSBEiJ_T0022282.1 MGP_WSBEiJ_G0016055.1 mouse_genomes_project 1 164402433 164432951 - Dars2 protein_coding retained_intron MGP_WSBEiJ_T0022283.1 MGP_WSBEiJ_G0016055.1 mouse_genomes_project 1 164402744 164409581 - Dars2 protein_coding processed_transcript MGP_WSBEiJ_T0022284.1 MGP_WSBEiJ_G0016055.1 mouse_genomes_project 1 164402750 164432965 - Dars2 protein_coding retained_intron MGP_WSBEiJ_T0022285.1 MGP_WSBEiJ_G0016055.1 mouse_genomes_project 1 164407617 164432916 - Dars2 protein_coding retained_intron MGP_WSBEiJ_T0022286.1 MGP_WSBEiJ_G0016055.1 mouse_genomes_project 1 164424941 164425972 - Dars2 protein_coding retained_intron MGP_WSBEiJ_T0022287.1 MGP_WSBEiJ_G0016055.1 mouse_genomes_project 1 164425300 164432939 - Dars2 protein_coding processed_transcript MGP_WSBEiJ_T0021085.1 MGP_WSBEiJ_G0015813.1 mouse_genomes_project 1 121465788 121527265 + MGP_WSBEiJ_P0021085 Sctr protein_coding protein_coding MGP_WSBEiJ_T0021086.1 MGP_WSBEiJ_G0015813.1 mouse_genomes_project 1 121465928 121527263 + MGP_WSBEiJ_P0021086 Sctr protein_coding protein_coding MGP_WSBEiJ_T0011753.1 MGP_WSBEiJ_G0009883.1 mouse_genomes_project 1 32969128 32969564 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011805.1 MGP_WSBEiJ_G0009935.1 mouse_genomes_project 1 50711257 50712616 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005971.1 MGP_WSBEiJ_G0004997.1 mouse_genomes_project 1 197729643 197731064 - Gm31406 lincRNA lincRNA MGP_WSBEiJ_T0023261.1 MGP_WSBEiJ_G0016293.1 mouse_genomes_project 1 186019343 186035730 + protein_coding retained_intron MGP_WSBEiJ_T0023262.1 MGP_WSBEiJ_G0016293.1 mouse_genomes_project 1 186021391 186052986 + MGP_WSBEiJ_P0023262 protein_coding protein_coding MGP_WSBEiJ_T0023263.1 MGP_WSBEiJ_G0016293.1 mouse_genomes_project 1 186023095 186026773 + protein_coding processed_transcript MGP_WSBEiJ_T0019626.1 MGP_WSBEiJ_G0015521.1 mouse_genomes_project 1 64456143 64476716 - MGP_WSBEiJ_P0019626 Gm28845 protein_coding protein_coding MGP_WSBEiJ_T0000363.1 MGP_WSBEiJ_G0000311.1 mouse_genomes_project 1 13100141 13103272 + TEC TEC MGP_WSBEiJ_T0012077.1 MGP_WSBEiJ_G0010207.1 mouse_genomes_project 1 167463842 167464231 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019945.1 MGP_WSBEiJ_G0015583.1 mouse_genomes_project 1 74836663 74843050 - MGP_WSBEiJ_P0019945 Ihh protein_coding protein_coding MGP_WSBEiJ_T0019946.1 MGP_WSBEiJ_G0015583.1 mouse_genomes_project 1 74839101 74842820 - Ihh protein_coding retained_intron MGP_WSBEiJ_T0097244.1 MGP_WSBEiJ_G0035924.1 mouse_genomes_project 1 90112884 90120722 + Gm28499 sense_intronic sense_intronic MGP_WSBEiJ_T0011810.1 MGP_WSBEiJ_G0009940.1 mouse_genomes_project 1 52160820 52161143 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000642.1 MGP_WSBEiJ_G0000585.1 mouse_genomes_project 1 150265996 150270234 + TEC TEC MGP_WSBEiJ_T0020593.1 MGP_WSBEiJ_G0015706.1 mouse_genomes_project 1 91579525 91617576 + MGP_WSBEiJ_P0020593 Mlph protein_coding protein_coding MGP_WSBEiJ_T0020594.1 MGP_WSBEiJ_G0015706.1 mouse_genomes_project 1 91592123 91592877 + MGP_WSBEiJ_P0020594 Mlph protein_coding protein_coding MGP_WSBEiJ_T0020595.1 MGP_WSBEiJ_G0015706.1 mouse_genomes_project 1 91603626 91604698 + Mlph protein_coding retained_intron MGP_WSBEiJ_T0000432.1 MGP_WSBEiJ_G0000377.1 mouse_genomes_project 1 41116803 41117479 + TEC TEC MGP_WSBEiJ_T0002728.1 MGP_WSBEiJ_G0002598.1 mouse_genomes_project 1 39076840 39092034 + Gm37915 antisense antisense MGP_WSBEiJ_T0099983.1 MGP_WSBEiJ_G0038636.1 mouse_genomes_project 1 186869732 186870666 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099984.1 MGP_WSBEiJ_G0038636.1 mouse_genomes_project 1 186870154 186878911 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0019275.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56758628 56870865 + MGP_WSBEiJ_P0019275 Spats2l protein_coding protein_coding MGP_WSBEiJ_T0019276.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56758715 56864821 + Spats2l protein_coding retained_intron MGP_WSBEiJ_T0019277.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56758767 56887206 + MGP_WSBEiJ_P0019277 Spats2l protein_coding protein_coding MGP_WSBEiJ_T0019278.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56758885 56784915 + Spats2l protein_coding retained_intron MGP_WSBEiJ_T0019279.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56759066 56870933 + MGP_WSBEiJ_P0019279 Spats2l protein_coding protein_coding MGP_WSBEiJ_T0019280.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56759210 56923096 + MGP_WSBEiJ_P0019280 Spats2l protein_coding protein_coding MGP_WSBEiJ_T0019281.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56759356 56841935 + Spats2l protein_coding retained_intron MGP_WSBEiJ_T0019282.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56759378 56816741 + Spats2l protein_coding retained_intron MGP_WSBEiJ_T0019283.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56759383 56784057 + Spats2l protein_coding retained_intron MGP_WSBEiJ_T0019284.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56782148 56931552 + MGP_WSBEiJ_P0019284 Spats2l protein_coding protein_coding MGP_WSBEiJ_T0019285.1 MGP_WSBEiJ_G0015457.1 mouse_genomes_project 1 56887167 56925449 + Spats2l protein_coding retained_intron MGP_WSBEiJ_T0100207.1 MGP_WSBEiJ_G0038765.1 mouse_genomes_project 1 98275089 98383508 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100208.1 MGP_WSBEiJ_G0038765.1 mouse_genomes_project 1 98373235 98482705 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0022329.1 MGP_WSBEiJ_G0016064.1 mouse_genomes_project 1 165327112 165366906 - MGP_WSBEiJ_P0022329 4930558K02Rik protein_coding protein_coding MGP_WSBEiJ_T0022330.1 MGP_WSBEiJ_G0016064.1 mouse_genomes_project 1 165327117 165354757 - 4930558K02Rik protein_coding processed_transcript MGP_WSBEiJ_T0022331.1 MGP_WSBEiJ_G0016064.1 mouse_genomes_project 1 165327414 165354881 - MGP_WSBEiJ_P0022331 4930558K02Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0021764.1 MGP_WSBEiJ_G0015961.1 mouse_genomes_project 1 141283247 141288115 - MGP_WSBEiJ_P0021764 2310009B15Rik protein_coding protein_coding MGP_WSBEiJ_T0021765.1 MGP_WSBEiJ_G0015961.1 mouse_genomes_project 1 141283248 141285615 - 2310009B15Rik protein_coding retained_intron MGP_WSBEiJ_T0021766.1 MGP_WSBEiJ_G0015961.1 mouse_genomes_project 1 141283297 141288110 - MGP_WSBEiJ_P0021766 2310009B15Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012062.1 MGP_WSBEiJ_G0010192.1 mouse_genomes_project 1 160783876 160784398 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0019935.1 MGP_WSBEiJ_G0015578.1 mouse_genomes_project 1 74673314 74686488 + MGP_WSBEiJ_P0019935 Wnt10a protein_coding protein_coding MGP_WSBEiJ_T0018398.1 MGP_WSBEiJ_G0015278.1 mouse_genomes_project 1 15029125 15069616 + MGP_WSBEiJ_P0018398 Crispld1 protein_coding protein_coding MGP_WSBEiJ_T0018399.1 MGP_WSBEiJ_G0015278.1 mouse_genomes_project 1 15029139 15049077 + MGP_WSBEiJ_P0018399 Crispld1 protein_coding protein_coding MGP_WSBEiJ_T0018400.1 MGP_WSBEiJ_G0015278.1 mouse_genomes_project 1 15029168 15071501 + MGP_WSBEiJ_P0018400 Crispld1 protein_coding protein_coding MGP_WSBEiJ_T0021777.1 MGP_WSBEiJ_G0015963.1 mouse_genomes_project 1 141636579 141826923 - MGP_WSBEiJ_P0021777 Crb1 protein_coding protein_coding MGP_WSBEiJ_T0021778.1 MGP_WSBEiJ_G0015963.1 mouse_genomes_project 1 141637756 141641757 - Crb1 protein_coding retained_intron MGP_WSBEiJ_T0021779.1 MGP_WSBEiJ_G0015963.1 mouse_genomes_project 1 141668981 141826946 - MGP_WSBEiJ_P0021779 Crb1 protein_coding protein_coding MGP_WSBEiJ_T0021780.1 MGP_WSBEiJ_G0015963.1 mouse_genomes_project 1 141685478 141695584 - Crb1 protein_coding retained_intron MGP_WSBEiJ_T0021781.1 MGP_WSBEiJ_G0015963.1 mouse_genomes_project 1 141687487 141826894 - MGP_WSBEiJ_P0021781 Crb1 protein_coding protein_coding MGP_WSBEiJ_T0021782.1 MGP_WSBEiJ_G0015963.1 mouse_genomes_project 1 141688549 141775289 - MGP_WSBEiJ_P0021782 Crb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021783.1 MGP_WSBEiJ_G0015963.1 mouse_genomes_project 1 141688564 141775309 - MGP_WSBEiJ_P0021783 Crb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020273.1 MGP_WSBEiJ_G0015636.1 mouse_genomes_project 1 83201561 83203798 + MGP_WSBEiJ_P0020273 Krtap28-13 protein_coding protein_coding MGP_WSBEiJ_T0019361.1 MGP_WSBEiJ_G0015471.1 mouse_genomes_project 1 57719292 57748980 - protein_coding retained_intron MGP_WSBEiJ_T0000542.1 MGP_WSBEiJ_G0000487.1 mouse_genomes_project 1 96581484 96583576 + TEC TEC MGP_WSBEiJ_T0009326.1 MGP_WSBEiJ_G0007483.1 mouse_genomes_project 1 27092488 27092584 - Gm23785 miRNA miRNA MGP_WSBEiJ_T0011696.1 MGP_WSBEiJ_G0009826.1 mouse_genomes_project 1 15259010 15260411 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0020577.1 MGP_WSBEiJ_G0015704.1 mouse_genomes_project 1 91250877 91260528 + Cops8 protein_coding retained_intron MGP_WSBEiJ_T0020578.1 MGP_WSBEiJ_G0015704.1 mouse_genomes_project 1 91250879 91258871 + Cops8 protein_coding retained_intron MGP_WSBEiJ_T0020579.1 MGP_WSBEiJ_G0015704.1 mouse_genomes_project 1 91250900 91258442 + Cops8 protein_coding processed_transcript MGP_WSBEiJ_T0020580.1 MGP_WSBEiJ_G0015704.1 mouse_genomes_project 1 91250900 91253065 + Cops8 protein_coding retained_intron MGP_WSBEiJ_T0020581.1 MGP_WSBEiJ_G0015704.1 mouse_genomes_project 1 91250929 91259585 + MGP_WSBEiJ_P0020581 Cops8 protein_coding protein_coding MGP_WSBEiJ_T0020582.1 MGP_WSBEiJ_G0015704.1 mouse_genomes_project 1 91250951 91260745 + MGP_WSBEiJ_P0020582 Cops8 protein_coding protein_coding MGP_WSBEiJ_T0020583.1 MGP_WSBEiJ_G0015704.1 mouse_genomes_project 1 91257058 91258733 + Cops8 protein_coding retained_intron MGP_WSBEiJ_T0020584.1 MGP_WSBEiJ_G0015704.1 mouse_genomes_project 1 91258750 91259798 + Cops8 protein_coding retained_intron MGP_WSBEiJ_T0011948.1 MGP_WSBEiJ_G0010078.1 mouse_genomes_project 1 110007656 110009524 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005866.1 MGP_WSBEiJ_G0004915.1 mouse_genomes_project 1 160116716 160200349 - Gm28694 lincRNA lincRNA MGP_WSBEiJ_T0005950.1 MGP_WSBEiJ_G0004980.1 mouse_genomes_project 1 190095068 190109247 + Gm38093 lincRNA lincRNA MGP_WSBEiJ_T0011591.1 MGP_WSBEiJ_G0009748.1 mouse_genomes_project 1 108762110 108782417 + MGP_WSBEiJ_P0011591 polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0011592.1 MGP_WSBEiJ_G0009748.1 mouse_genomes_project 1 108762134 108784467 + polymorphic_pseudogene processed_transcript MGP_WSBEiJ_T0011593.1 MGP_WSBEiJ_G0009748.1 mouse_genomes_project 1 108765481 108782267 + MGP_WSBEiJ_P0011593 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0018831.1 MGP_WSBEiJ_G0015364.1 mouse_genomes_project 1 36356851 36826769 - MGP_WSBEiJ_P0018831 Aff3 protein_coding protein_coding MGP_WSBEiJ_T0018832.1 MGP_WSBEiJ_G0015364.1 mouse_genomes_project 1 36356852 36865255 - MGP_WSBEiJ_P0018832 Aff3 protein_coding protein_coding MGP_WSBEiJ_T0018833.1 MGP_WSBEiJ_G0015364.1 mouse_genomes_project 1 36358980 36826725 - MGP_WSBEiJ_P0018833 Aff3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0018834.1 MGP_WSBEiJ_G0015364.1 mouse_genomes_project 1 36360822 36377311 - Aff3 protein_coding processed_transcript MGP_WSBEiJ_T0018835.1 MGP_WSBEiJ_G0015364.1 mouse_genomes_project 1 36524365 36865255 - Aff3 protein_coding processed_transcript MGP_WSBEiJ_T0018836.1 MGP_WSBEiJ_G0015364.1 mouse_genomes_project 1 36727873 36865255 - MGP_WSBEiJ_P0018836 Aff3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100425.1 MGP_WSBEiJ_G0038884.1 mouse_genomes_project 1 173431961 173432165 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0019782.1 MGP_WSBEiJ_G0015550.1 mouse_genomes_project 1 72498830 72501380 + MGP_WSBEiJ_P0019782 Rpl37a protein_coding protein_coding MGP_WSBEiJ_T0000401.1 MGP_WSBEiJ_G0000347.1 mouse_genomes_project 1 30390842 30392387 + TEC TEC MGP_WSBEiJ_T0022810.1 MGP_WSBEiJ_G0016171.1 mouse_genomes_project 1 175159398 175160666 + MGP_WSBEiJ_P0022810 Alyref2 protein_coding protein_coding MGP_WSBEiJ_T0022609.1 MGP_WSBEiJ_G0016126.1 mouse_genomes_project 1 173035595 173080170 - MGP_WSBEiJ_P0022609 Nuf2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0022610.1 MGP_WSBEiJ_G0016126.1 mouse_genomes_project 1 173060931 173077217 - MGP_WSBEiJ_P0022610 Nuf2 protein_coding protein_coding MGP_WSBEiJ_T0022611.1 MGP_WSBEiJ_G0016126.1 mouse_genomes_project 1 173065416 173087191 - MGP_WSBEiJ_P0022611 Nuf2 protein_coding protein_coding MGP_WSBEiJ_T0022612.1 MGP_WSBEiJ_G0016126.1 mouse_genomes_project 1 173079816 173087198 - Nuf2 protein_coding retained_intron MGP_WSBEiJ_T0098824.1 MGP_WSBEiJ_G0037487.1 mouse_genomes_project 1 193125253 193125384 - Gm25095 snoRNA snoRNA MGP_WSBEiJ_T0020141.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75388757 75404686 + MGP_WSBEiJ_P0020141 Slc4a3 protein_coding protein_coding MGP_WSBEiJ_T0020142.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75388797 75390009 + Slc4a3 protein_coding retained_intron MGP_WSBEiJ_T0020143.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75388963 75390540 + MGP_WSBEiJ_P0020143 Slc4a3 protein_coding protein_coding MGP_WSBEiJ_T0020144.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75388997 75401396 + MGP_WSBEiJ_P0020144 Slc4a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020145.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75389028 75390246 + Slc4a3 protein_coding retained_intron MGP_WSBEiJ_T0020146.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75389034 75390513 + MGP_WSBEiJ_P0020146 Slc4a3 protein_coding protein_coding MGP_WSBEiJ_T0020147.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75389145 75403393 + Slc4a3 protein_coding retained_intron MGP_WSBEiJ_T0020148.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75389157 75390036 + Slc4a3 protein_coding retained_intron MGP_WSBEiJ_T0020149.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75392100 75393884 + MGP_WSBEiJ_P0020149 Slc4a3 protein_coding protein_coding MGP_WSBEiJ_T0020150.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75392269 75393631 + Slc4a3 protein_coding retained_intron MGP_WSBEiJ_T0020151.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75393096 75397625 + MGP_WSBEiJ_P0020151 Slc4a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020152.1 MGP_WSBEiJ_G0015609.1 mouse_genomes_project 1 75394210 75396234 + MGP_WSBEiJ_P0020152 Slc4a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012095.1 MGP_WSBEiJ_G0010225.1 mouse_genomes_project 1 174582568 174582863 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000502.1 MGP_WSBEiJ_G0000447.1 mouse_genomes_project 1 80679828 80683376 - TEC TEC MGP_WSBEiJ_T0012053.1 MGP_WSBEiJ_G0010183.1 mouse_genomes_project 1 157375711 157376262 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018484.1 MGP_WSBEiJ_G0015302.1 mouse_genomes_project 1 21650200 21726808 + MGP_WSBEiJ_P0018484 Col9a1 protein_coding protein_coding MGP_WSBEiJ_T0018485.1 MGP_WSBEiJ_G0015302.1 mouse_genomes_project 1 21668832 21726808 + MGP_WSBEiJ_P0018485 Col9a1 protein_coding protein_coding MGP_WSBEiJ_T0018486.1 MGP_WSBEiJ_G0015302.1 mouse_genomes_project 1 21670662 21694360 + Col9a1 protein_coding processed_transcript MGP_WSBEiJ_T0018487.1 MGP_WSBEiJ_G0015302.1 mouse_genomes_project 1 21703089 21704528 + Col9a1 protein_coding processed_transcript MGP_WSBEiJ_T0000735.1 MGP_WSBEiJ_G0000677.1 mouse_genomes_project 1 184549287 184550151 + TEC TEC MGP_WSBEiJ_T0018488.1 MGP_WSBEiJ_G0015303.1 mouse_genomes_project 1 21736626 21939889 - Col19a1 protein_coding processed_transcript MGP_WSBEiJ_T0018489.1 MGP_WSBEiJ_G0015303.1 mouse_genomes_project 1 21738732 22083258 - MGP_WSBEiJ_P0018489 Col19a1 protein_coding protein_coding MGP_WSBEiJ_T0018490.1 MGP_WSBEiJ_G0015303.1 mouse_genomes_project 1 21755253 22083197 - MGP_WSBEiJ_P0018490 Col19a1 protein_coding protein_coding MGP_WSBEiJ_T0005901.1 MGP_WSBEiJ_G0004943.1 mouse_genomes_project 1 173766613 173770103 - Gm37502 lincRNA lincRNA MGP_WSBEiJ_T0002746.1 MGP_WSBEiJ_G0002612.1 mouse_genomes_project 1 58255721 58272948 + Gm29017 antisense antisense MGP_WSBEiJ_T0000777.1 MGP_WSBEiJ_G0000717.1 mouse_genomes_project 1 199736864 199739801 + TEC TEC MGP_WSBEiJ_T0012130.1 MGP_WSBEiJ_G0010260.1 mouse_genomes_project 1 195625921 195626347 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098734.1 MGP_WSBEiJ_G0037397.1 mouse_genomes_project 1 14796866 14796977 + Gm25166 snoRNA snoRNA MGP_WSBEiJ_T0097252.1 MGP_WSBEiJ_G0035932.1 mouse_genomes_project 1 155617863 155623276 - Gm15479 sense_intronic sense_intronic MGP_WSBEiJ_T0011879.1 MGP_WSBEiJ_G0010009.1 mouse_genomes_project 1 75488587 75489394 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002741.1 MGP_WSBEiJ_G0002609.1 mouse_genomes_project 1 57247276 57312869 - Gm15759 antisense antisense MGP_WSBEiJ_T0022036.1 MGP_WSBEiJ_G0016015.1 mouse_genomes_project 1 157258753 157263228 + MGP_WSBEiJ_P0022036 Zfp648 protein_coding protein_coding MGP_WSBEiJ_T0021281.1 MGP_WSBEiJ_G0015857.1 mouse_genomes_project 1 132932535 132941200 - MGP_WSBEiJ_P0021281 Il19 protein_coding protein_coding MGP_WSBEiJ_T0021282.1 MGP_WSBEiJ_G0015857.1 mouse_genomes_project 1 132932537 132940340 - MGP_WSBEiJ_P0021282 Il19 protein_coding protein_coding MGP_WSBEiJ_T0021283.1 MGP_WSBEiJ_G0015857.1 mouse_genomes_project 1 132932695 132941214 - MGP_WSBEiJ_P0021283 Il19 protein_coding protein_coding MGP_WSBEiJ_T0021284.1 MGP_WSBEiJ_G0015857.1 mouse_genomes_project 1 132932737 132941172 - MGP_WSBEiJ_P0021284 Il19 protein_coding protein_coding MGP_WSBEiJ_T0000729.1 MGP_WSBEiJ_G0000672.1 mouse_genomes_project 1 182343308 182343902 - TEC TEC MGP_WSBEiJ_T0000730.1 MGP_WSBEiJ_G0000672.1 mouse_genomes_project 1 182343354 182343900 - TEC pseudogene MGP_WSBEiJ_T0011762.1 MGP_WSBEiJ_G0009892.1 mouse_genomes_project 1 38643533 38644203 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0022248.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163538092 163677114 - MGP_WSBEiJ_P0022248 Rabgap1l protein_coding protein_coding MGP_WSBEiJ_T0022249.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163544972 163550782 - Rabgap1l protein_coding retained_intron MGP_WSBEiJ_T0022250.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163545488 163572554 - MGP_WSBEiJ_P0022250 Rabgap1l protein_coding protein_coding MGP_WSBEiJ_T0022251.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163545540 163631282 - MGP_WSBEiJ_P0022251 Rabgap1l protein_coding protein_coding MGP_WSBEiJ_T0022252.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163545590 163609639 - Rabgap1l protein_coding processed_transcript MGP_WSBEiJ_T0022253.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163557814 163569082 - Rabgap1l protein_coding retained_intron MGP_WSBEiJ_T0022254.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163569065 163571868 - Rabgap1l protein_coding processed_transcript MGP_WSBEiJ_T0022255.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163577675 163633114 - MGP_WSBEiJ_P0022255 Rabgap1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0022256.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163578036 163770018 - MGP_WSBEiJ_P0022256 Rabgap1l protein_coding protein_coding MGP_WSBEiJ_T0022257.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163578308 164138650 - MGP_WSBEiJ_P0022257 Rabgap1l protein_coding protein_coding MGP_WSBEiJ_T0022258.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163606182 163609826 - Rabgap1l protein_coding processed_transcript MGP_WSBEiJ_T0022259.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163610905 163617221 - Rabgap1l protein_coding processed_transcript MGP_WSBEiJ_T0022260.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163613376 163631720 - Rabgap1l protein_coding processed_transcript MGP_WSBEiJ_T0022261.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 163769750 163782864 - Rabgap1l protein_coding retained_intron MGP_WSBEiJ_T0022262.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 164012060 164138642 - MGP_WSBEiJ_P0022262 Rabgap1l protein_coding protein_coding MGP_WSBEiJ_T0022263.1 MGP_WSBEiJ_G0016051.1 mouse_genomes_project 1 164081380 164138914 - MGP_WSBEiJ_P0022263 Rabgap1l protein_coding protein_coding MGP_WSBEiJ_T0005633.1 MGP_WSBEiJ_G0004729.1 mouse_genomes_project 1 42277369 42277868 - Gm29156 lincRNA lincRNA MGP_WSBEiJ_T0000779.1 MGP_WSBEiJ_G0000719.1 mouse_genomes_project 1 199787530 199790994 + TEC TEC MGP_WSBEiJ_T0023257.1 MGP_WSBEiJ_G0016291.1 mouse_genomes_project 1 185604113 185721880 + MGP_WSBEiJ_P0023257 Cnih3 protein_coding protein_coding MGP_WSBEiJ_T0023258.1 MGP_WSBEiJ_G0016291.1 mouse_genomes_project 1 185604115 185722604 + MGP_WSBEiJ_P0023258 Cnih3 protein_coding protein_coding MGP_WSBEiJ_T0023259.1 MGP_WSBEiJ_G0016291.1 mouse_genomes_project 1 185604683 185721258 + MGP_WSBEiJ_P0023259 Cnih3 protein_coding protein_coding MGP_WSBEiJ_T0005694.1 MGP_WSBEiJ_G0004777.1 mouse_genomes_project 1 71852712 71867013 - Gm4319 lincRNA lincRNA MGP_WSBEiJ_T0021526.1 MGP_WSBEiJ_G0015913.1 mouse_genomes_project 1 136378794 136417242 - MGP_WSBEiJ_P0021526 Adora1 protein_coding protein_coding MGP_WSBEiJ_T0021527.1 MGP_WSBEiJ_G0015913.1 mouse_genomes_project 1 136378796 136418095 - MGP_WSBEiJ_P0021527 Adora1 protein_coding protein_coding MGP_WSBEiJ_T0021528.1 MGP_WSBEiJ_G0015913.1 mouse_genomes_project 1 136380920 136418061 - MGP_WSBEiJ_P0021528 Adora1 protein_coding protein_coding MGP_WSBEiJ_T0021529.1 MGP_WSBEiJ_G0015913.1 mouse_genomes_project 1 136382968 136418028 - MGP_WSBEiJ_P0021529 Adora1 protein_coding protein_coding MGP_WSBEiJ_T0000582.1 MGP_WSBEiJ_G0000527.1 mouse_genomes_project 1 129768380 129774360 - TEC TEC MGP_WSBEiJ_T0009327.1 MGP_WSBEiJ_G0007484.1 mouse_genomes_project 1 27151684 27151809 + Mir6342 miRNA miRNA MGP_WSBEiJ_T0023081.1 MGP_WSBEiJ_G0016254.1 mouse_genomes_project 1 181734385 181760945 + MGP_WSBEiJ_P0023081 1700016C15Rik protein_coding protein_coding MGP_WSBEiJ_T0022790.1 MGP_WSBEiJ_G0016167.1 mouse_genomes_project 1 175048038 175070968 + Arhgap30 protein_coding retained_intron MGP_WSBEiJ_T0022791.1 MGP_WSBEiJ_G0016167.1 mouse_genomes_project 1 175048038 175070910 + Arhgap30 protein_coding retained_intron MGP_WSBEiJ_T0022792.1 MGP_WSBEiJ_G0016167.1 mouse_genomes_project 1 175048038 175070910 + MGP_WSBEiJ_P0022792 Arhgap30 protein_coding protein_coding MGP_WSBEiJ_T0022793.1 MGP_WSBEiJ_G0016167.1 mouse_genomes_project 1 175048083 175051894 + Arhgap30 protein_coding retained_intron MGP_WSBEiJ_T0016451.1 MGP_WSBEiJ_G0014534.1 mouse_genomes_project 1 149524122 149526757 - A230059L01Rik processed_transcript antisense MGP_WSBEiJ_T0016452.1 MGP_WSBEiJ_G0014534.1 mouse_genomes_project 1 149525474 149528948 - A230059L01Rik processed_transcript TEC MGP_WSBEiJ_T0009325.1 MGP_WSBEiJ_G0007482.1 mouse_genomes_project 1 27021702 27021790 + Gm22679 miRNA miRNA MGP_WSBEiJ_T0096886.1 MGP_WSBEiJ_G0035567.1 mouse_genomes_project 1 140395929 140396049 - Gm23782 rRNA rRNA MGP_WSBEiJ_T0002762.1 MGP_WSBEiJ_G0002623.1 mouse_genomes_project 1 72788586 72828752 + 1700027A15Rik antisense antisense MGP_WSBEiJ_T0002763.1 MGP_WSBEiJ_G0002623.1 mouse_genomes_project 1 72820483 72829535 + 1700027A15Rik antisense antisense MGP_WSBEiJ_T0002764.1 MGP_WSBEiJ_G0002623.1 mouse_genomes_project 1 72820828 72829526 + 1700027A15Rik antisense antisense MGP_WSBEiJ_T0002765.1 MGP_WSBEiJ_G0002623.1 mouse_genomes_project 1 72826630 72829527 + 1700027A15Rik antisense antisense MGP_WSBEiJ_T0002766.1 MGP_WSBEiJ_G0002623.1 mouse_genomes_project 1 72828596 72829535 + 1700027A15Rik antisense antisense MGP_WSBEiJ_T0021133.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127087589 127093481 - Actr3 protein_coding retained_intron MGP_WSBEiJ_T0021134.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127087995 127132150 - MGP_WSBEiJ_P0021134 Actr3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0021135.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127088101 127131997 - MGP_WSBEiJ_P0021135 Actr3 protein_coding protein_coding MGP_WSBEiJ_T0021136.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127092357 127094185 - Actr3 protein_coding retained_intron MGP_WSBEiJ_T0021137.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127101733 127104814 - Actr3 protein_coding retained_intron MGP_WSBEiJ_T0021138.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127101752 127132396 - MGP_WSBEiJ_P0021138 Actr3 protein_coding protein_coding MGP_WSBEiJ_T0021139.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127101782 127131313 - MGP_WSBEiJ_P0021139 Actr3 protein_coding protein_coding MGP_WSBEiJ_T0021140.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127103164 127132123 - MGP_WSBEiJ_P0021140 Actr3 protein_coding protein_coding MGP_WSBEiJ_T0021141.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127103221 127132376 - MGP_WSBEiJ_P0021141 Actr3 protein_coding protein_coding MGP_WSBEiJ_T0021142.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127103230 127132139 - MGP_WSBEiJ_P0021142 Actr3 protein_coding protein_coding MGP_WSBEiJ_T0021143.1 MGP_WSBEiJ_G0015826.1 mouse_genomes_project 1 127112726 127132097 - Actr3 protein_coding retained_intron MGP_WSBEiJ_T0097537.1 MGP_WSBEiJ_G0036200.1 mouse_genomes_project 1 52750318 52750432 - Gm24251 snRNA snRNA MGP_WSBEiJ_T0000406.1 MGP_WSBEiJ_G0000352.1 mouse_genomes_project 1 31590638 31591527 + TEC TEC MGP_WSBEiJ_T0000407.1 MGP_WSBEiJ_G0000352.1 mouse_genomes_project 1 31590657 31591527 + TEC TEC MGP_WSBEiJ_T0005949.1 MGP_WSBEiJ_G0004979.1 mouse_genomes_project 1 189794483 189802873 - Gm2061 lincRNA lincRNA MGP_WSBEiJ_T0020093.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272685 75279901 + MGP_WSBEiJ_P0020093 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020094.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272698 75279900 + MGP_WSBEiJ_P0020094 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020095.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272712 75279728 + MGP_WSBEiJ_P0020095 Gmppa protein_coding unknown_likely_coding MGP_WSBEiJ_T0020096.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272716 75275609 + MGP_WSBEiJ_P0020096 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020097.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272722 75277238 + MGP_WSBEiJ_P0020097 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020098.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272723 75278251 + MGP_WSBEiJ_P0020098 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020099.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272737 75278345 + MGP_WSBEiJ_P0020099 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020100.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272739 75276125 + MGP_WSBEiJ_P0020100 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020101.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272842 75278260 + MGP_WSBEiJ_P0020101 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020102.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75272868 75275083 + MGP_WSBEiJ_P0020102 Gmppa protein_coding protein_coding MGP_WSBEiJ_T0020103.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75273697 75278765 + MGP_WSBEiJ_P0020103 Gmppa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0020104.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75278355 75279659 + Gmppa protein_coding retained_intron MGP_WSBEiJ_T0020105.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75278902 75279900 + Gmppa protein_coding retained_intron MGP_WSBEiJ_T0020106.1 MGP_WSBEiJ_G0015602.1 mouse_genomes_project 1 75278960 75279906 + Gmppa protein_coding retained_intron MGP_WSBEiJ_T0005758.1 MGP_WSBEiJ_G0004830.1 mouse_genomes_project 1 95605278 95611233 + 4930440C22Rik lincRNA lincRNA MGP_WSBEiJ_T0005759.1 MGP_WSBEiJ_G0004830.1 mouse_genomes_project 1 95605637 95611253 + 4930440C22Rik lincRNA lincRNA MGP_WSBEiJ_T0012056.1 MGP_WSBEiJ_G0010186.1 mouse_genomes_project 1 158260337 158260918 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054787.1 MGP_WSBEiJ_G0025277.1 mouse_genomes_project 2 88230544 88383893 - MGP_WSBEiJ_P0054787 protein_coding protein_coding MGP_WSBEiJ_T0054789.1 MGP_WSBEiJ_G0025277.1 mouse_genomes_project 2 88231116 88383893 - protein_coding processed_transcript MGP_WSBEiJ_T0057469.1 MGP_WSBEiJ_G0025978.1 mouse_genomes_project 2 158811239 158816998 + Itch protein_coding retained_intron MGP_WSBEiJ_T0057470.1 MGP_WSBEiJ_G0025978.1 mouse_genomes_project 2 158811239 158850838 + Itch protein_coding retained_intron MGP_WSBEiJ_T0057471.1 MGP_WSBEiJ_G0025978.1 mouse_genomes_project 2 158811239 158905698 + MGP_WSBEiJ_P0057471 Itch protein_coding protein_coding MGP_WSBEiJ_T0057472.1 MGP_WSBEiJ_G0025978.1 mouse_genomes_project 2 158811254 158856349 + Itch protein_coding retained_intron MGP_WSBEiJ_T0057473.1 MGP_WSBEiJ_G0025978.1 mouse_genomes_project 2 158811261 158881939 + Itch protein_coding processed_transcript MGP_WSBEiJ_T0057474.1 MGP_WSBEiJ_G0025978.1 mouse_genomes_project 2 158811289 158905696 + MGP_WSBEiJ_P0057474 Itch protein_coding protein_coding MGP_WSBEiJ_T0057475.1 MGP_WSBEiJ_G0025978.1 mouse_genomes_project 2 158811291 158892037 + Itch protein_coding retained_intron MGP_WSBEiJ_T0054791.1 MGP_WSBEiJ_G0025280.1 mouse_genomes_project 2 88358010 88358937 - MGP_WSBEiJ_P0054791 Olfr1132 protein_coding protein_coding MGP_WSBEiJ_T0013246.1 MGP_WSBEiJ_G0011376.1 mouse_genomes_project 2 73021937 73022282 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054579.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995412 85046667 - MGP_WSBEiJ_P0054579 protein_coding protein_coding MGP_WSBEiJ_T0054580.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995412 85046667 - MGP_WSBEiJ_P0054580 protein_coding protein_coding MGP_WSBEiJ_T0054581.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995412 85046667 - MGP_WSBEiJ_P0054581 protein_coding protein_coding MGP_WSBEiJ_T0054582.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995412 85046667 - MGP_WSBEiJ_P0054582 protein_coding protein_coding MGP_WSBEiJ_T0054583.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995412 85046667 - MGP_WSBEiJ_P0054583 protein_coding protein_coding MGP_WSBEiJ_T0054584.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995412 85046667 - MGP_WSBEiJ_P0054584 protein_coding protein_coding MGP_WSBEiJ_T0054585.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995414 85046667 - MGP_WSBEiJ_P0054585 protein_coding protein_coding MGP_WSBEiJ_T0054586.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995414 85046667 - MGP_WSBEiJ_P0054586 protein_coding protein_coding MGP_WSBEiJ_T0054587.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995414 85046667 - MGP_WSBEiJ_P0054587 protein_coding protein_coding MGP_WSBEiJ_T0054588.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995414 85046667 - MGP_WSBEiJ_P0054588 protein_coding protein_coding MGP_WSBEiJ_T0054589.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995414 85046667 - MGP_WSBEiJ_P0054589 protein_coding protein_coding MGP_WSBEiJ_T0054590.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995414 85046667 - MGP_WSBEiJ_P0054590 protein_coding protein_coding MGP_WSBEiJ_T0054591.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995414 85046667 - MGP_WSBEiJ_P0054591 protein_coding protein_coding MGP_WSBEiJ_T0054592.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84995441 85046667 - MGP_WSBEiJ_P0054592 protein_coding protein_coding MGP_WSBEiJ_T0054593.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84996122 85046662 - MGP_WSBEiJ_P0054593 protein_coding protein_coding MGP_WSBEiJ_T0054594.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84996124 85046462 - protein_coding processed_transcript MGP_WSBEiJ_T0054595.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84996124 85045508 - MGP_WSBEiJ_P0054595 protein_coding protein_coding MGP_WSBEiJ_T0054596.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84996124 85046432 - MGP_WSBEiJ_P0054596 protein_coding protein_coding MGP_WSBEiJ_T0054598.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84997874 85005776 - protein_coding processed_transcript MGP_WSBEiJ_T0054599.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84997970 85005796 - protein_coding processed_transcript MGP_WSBEiJ_T0054600.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 84998233 85046660 - MGP_WSBEiJ_P0054600 protein_coding protein_coding MGP_WSBEiJ_T0054601.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 85005085 85008679 - protein_coding processed_transcript MGP_WSBEiJ_T0054602.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 85020594 85034293 - protein_coding processed_transcript MGP_WSBEiJ_T0054603.1 MGP_WSBEiJ_G0025161.1 mouse_genomes_project 2 85020633 85044565 - protein_coding processed_transcript MGP_WSBEiJ_T0055482.1 MGP_WSBEiJ_G0025477.1 mouse_genomes_project 2 106391993 106400643 - Eif3m protein_coding retained_intron MGP_WSBEiJ_T0055483.1 MGP_WSBEiJ_G0025477.1 mouse_genomes_project 2 106391993 106410463 - MGP_WSBEiJ_P0055483 Eif3m protein_coding protein_coding MGP_WSBEiJ_T0055484.1 MGP_WSBEiJ_G0025477.1 mouse_genomes_project 2 106391996 106400195 - MGP_WSBEiJ_P0055484 Eif3m protein_coding protein_coding MGP_WSBEiJ_T0055485.1 MGP_WSBEiJ_G0025477.1 mouse_genomes_project 2 106392026 106410426 - MGP_WSBEiJ_P0055485 Eif3m protein_coding protein_coding MGP_WSBEiJ_T0057880.1 MGP_WSBEiJ_G0026047.1 mouse_genomes_project 2 162498239 162512988 + Actr5 protein_coding retained_intron MGP_WSBEiJ_T0057881.1 MGP_WSBEiJ_G0026047.1 mouse_genomes_project 2 162498239 162502537 + Actr5 protein_coding retained_intron MGP_WSBEiJ_T0057882.1 MGP_WSBEiJ_G0026047.1 mouse_genomes_project 2 162498239 162512988 + MGP_WSBEiJ_P0057882 Actr5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057883.1 MGP_WSBEiJ_G0026047.1 mouse_genomes_project 2 162498239 162513001 + MGP_WSBEiJ_P0057883 Actr5 protein_coding protein_coding MGP_WSBEiJ_T0057884.1 MGP_WSBEiJ_G0026047.1 mouse_genomes_project 2 162505034 162510492 + Actr5 protein_coding processed_transcript MGP_WSBEiJ_T0013227.1 MGP_WSBEiJ_G0011357.1 mouse_genomes_project 2 65994651 65996497 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054236.1 MGP_WSBEiJ_G0025089.1 mouse_genomes_project 2 71286029 71289376 - MGP_WSBEiJ_P0054236 Dlx2 protein_coding protein_coding MGP_WSBEiJ_T0054237.1 MGP_WSBEiJ_G0025089.1 mouse_genomes_project 2 71287487 71288572 - Dlx2 protein_coding retained_intron MGP_WSBEiJ_T0057525.1 MGP_WSBEiJ_G0025987.1 mouse_genomes_project 2 159310843 159334020 + MGP_WSBEiJ_P0057525 Myh7b protein_coding protein_coding MGP_WSBEiJ_T0057526.1 MGP_WSBEiJ_G0025987.1 mouse_genomes_project 2 159328752 159330094 + Myh7b protein_coding processed_transcript MGP_WSBEiJ_T0057527.1 MGP_WSBEiJ_G0025987.1 mouse_genomes_project 2 159333163 159333916 + Myh7b protein_coding retained_intron MGP_WSBEiJ_T0055232.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94302195 94348372 - MGP_WSBEiJ_P0055232 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0055233.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94302195 94348463 - MGP_WSBEiJ_P0055233 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0055234.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94302200 94348907 - MGP_WSBEiJ_P0055234 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0055235.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94302238 94303372 - Cd82 protein_coding processed_transcript MGP_WSBEiJ_T0055236.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94302914 94338644 - MGP_WSBEiJ_P0055236 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0055237.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94303741 94348347 - MGP_WSBEiJ_P0055237 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0055238.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94304911 94338648 - MGP_WSBEiJ_P0055238 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0055239.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94304911 94347873 - MGP_WSBEiJ_P0055239 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0055240.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94314655 94349101 - MGP_WSBEiJ_P0055240 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0055241.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94318006 94348404 - Cd82 protein_coding processed_transcript MGP_WSBEiJ_T0055242.1 MGP_WSBEiJ_G0025428.1 mouse_genomes_project 2 94321898 94348873 - MGP_WSBEiJ_P0055242 Cd82 protein_coding protein_coding MGP_WSBEiJ_T0058484.1 MGP_WSBEiJ_G0026200.1 mouse_genomes_project 2 177853524 177871380 + MGP_WSBEiJ_P0058484 Rae1 protein_coding protein_coding MGP_WSBEiJ_T0058485.1 MGP_WSBEiJ_G0026200.1 mouse_genomes_project 2 177853531 177865086 + MGP_WSBEiJ_P0058485 Rae1 protein_coding protein_coding MGP_WSBEiJ_T0058486.1 MGP_WSBEiJ_G0026200.1 mouse_genomes_project 2 177862285 177865085 + Rae1 protein_coding retained_intron MGP_WSBEiJ_T0058487.1 MGP_WSBEiJ_G0026200.1 mouse_genomes_project 2 177867304 177868462 + Rae1 protein_coding retained_intron MGP_WSBEiJ_T0058488.1 MGP_WSBEiJ_G0026200.1 mouse_genomes_project 2 177868101 177871068 + Rae1 protein_coding retained_intron MGP_WSBEiJ_T0013285.1 MGP_WSBEiJ_G0011415.1 mouse_genomes_project 2 86298814 86299010 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097310.1 MGP_WSBEiJ_G0035985.1 mouse_genomes_project 2 1134806 1138450 + Gm37814 sense_intronic sense_intronic MGP_WSBEiJ_T0053807.1 MGP_WSBEiJ_G0025015.1 mouse_genomes_project 2 57711159 57782519 + Upp2 protein_coding processed_transcript MGP_WSBEiJ_T0053808.1 MGP_WSBEiJ_G0025015.1 mouse_genomes_project 2 57711179 57728074 + Upp2 protein_coding processed_transcript MGP_WSBEiJ_T0053809.1 MGP_WSBEiJ_G0025015.1 mouse_genomes_project 2 57711248 57940964 + MGP_WSBEiJ_P0053809 Upp2 protein_coding protein_coding MGP_WSBEiJ_T0053810.1 MGP_WSBEiJ_G0025015.1 mouse_genomes_project 2 57902026 57939240 + MGP_WSBEiJ_P0053810 Upp2 protein_coding protein_coding MGP_WSBEiJ_T0053811.1 MGP_WSBEiJ_G0025015.1 mouse_genomes_project 2 57902264 57938666 + MGP_WSBEiJ_P0053811 Upp2 protein_coding protein_coding MGP_WSBEiJ_T0053812.1 MGP_WSBEiJ_G0025015.1 mouse_genomes_project 2 57913292 57938300 + Upp2 protein_coding processed_transcript MGP_WSBEiJ_T0010268.1 MGP_WSBEiJ_G0008425.1 mouse_genomes_project 2 93429738 93429810 + Mir7221 miRNA miRNA MGP_WSBEiJ_T0054120.1 MGP_WSBEiJ_G0025068.1 mouse_genomes_project 2 69384914 69420578 - MGP_WSBEiJ_P0054120 Ccdc173 protein_coding protein_coding MGP_WSBEiJ_T0054121.1 MGP_WSBEiJ_G0025068.1 mouse_genomes_project 2 69410515 69411573 - Ccdc173 protein_coding processed_transcript MGP_WSBEiJ_T0053884.1 MGP_WSBEiJ_G0025025.1 mouse_genomes_project 2 59472720 59567310 - MGP_WSBEiJ_P0053884 Ly75 protein_coding protein_coding MGP_WSBEiJ_T0053885.1 MGP_WSBEiJ_G0025025.1 mouse_genomes_project 2 59474377 59567238 - MGP_WSBEiJ_P0053885 Ly75 protein_coding protein_coding MGP_WSBEiJ_T0053535.1 MGP_WSBEiJ_G0024967.1 mouse_genomes_project 2 37053832 37115978 - MGP_WSBEiJ_P0053535 Psmb7 protein_coding protein_coding MGP_WSBEiJ_T0053536.1 MGP_WSBEiJ_G0024967.1 mouse_genomes_project 2 37080815 37115811 - Psmb7 protein_coding retained_intron MGP_WSBEiJ_T0007116.1 MGP_WSBEiJ_G0005840.1 mouse_genomes_project 2 71740714 71742031 + Gm13746 lincRNA lincRNA MGP_WSBEiJ_T0010209.1 MGP_WSBEiJ_G0008366.1 mouse_genomes_project 2 7832943 7833068 + Mir669h miRNA miRNA MGP_WSBEiJ_T0010221.1 MGP_WSBEiJ_G0008378.1 mouse_genomes_project 2 24440197 24440270 + Mir126a miRNA miRNA MGP_WSBEiJ_T0055721.1 MGP_WSBEiJ_G0025558.1 mouse_genomes_project 2 118768241 118781682 + MGP_WSBEiJ_P0055721 Tmco5 protein_coding protein_coding MGP_WSBEiJ_T0055722.1 MGP_WSBEiJ_G0025558.1 mouse_genomes_project 2 118768244 118781638 + MGP_WSBEiJ_P0055722 Tmco5 protein_coding protein_coding MGP_WSBEiJ_T0055723.1 MGP_WSBEiJ_G0025558.1 mouse_genomes_project 2 118768258 118781995 + MGP_WSBEiJ_P0055723 Tmco5 protein_coding protein_coding MGP_WSBEiJ_T0055724.1 MGP_WSBEiJ_G0025558.1 mouse_genomes_project 2 118777697 118781995 + Tmco5 protein_coding processed_transcript MGP_WSBEiJ_T0054848.1 MGP_WSBEiJ_G0025332.1 mouse_genomes_project 2 89850457 89851396 - MGP_WSBEiJ_P0054848 Olfr1215 protein_coding protein_coding MGP_WSBEiJ_T0096816.1 MGP_WSBEiJ_G0035497.1 mouse_genomes_project 2 112176635 112176844 - pseudogene pseudogene MGP_WSBEiJ_T0052994.1 MGP_WSBEiJ_G0024861.1 mouse_genomes_project 2 30329789 30345053 + MGP_WSBEiJ_P0052994 Plpp7 protein_coding protein_coding MGP_WSBEiJ_T0052995.1 MGP_WSBEiJ_G0024861.1 mouse_genomes_project 2 30329826 30344359 + MGP_WSBEiJ_P0052995 Plpp7 protein_coding protein_coding MGP_WSBEiJ_T0052996.1 MGP_WSBEiJ_G0024861.1 mouse_genomes_project 2 30330416 30345041 + MGP_WSBEiJ_P0052996 Plpp7 protein_coding protein_coding MGP_WSBEiJ_T0058614.1 MGP_WSBEiJ_G0026234.1 mouse_genomes_project 2 185240202 185285114 + MGP_WSBEiJ_P0058614 Osbpl2 protein_coding protein_coding MGP_WSBEiJ_T0058615.1 MGP_WSBEiJ_G0026234.1 mouse_genomes_project 2 185240231 185258570 + Osbpl2 protein_coding processed_transcript MGP_WSBEiJ_T0058616.1 MGP_WSBEiJ_G0026234.1 mouse_genomes_project 2 185240300 185281725 + Osbpl2 protein_coding retained_intron MGP_WSBEiJ_T0058617.1 MGP_WSBEiJ_G0026234.1 mouse_genomes_project 2 185270863 185272893 + Osbpl2 protein_coding retained_intron MGP_WSBEiJ_T0057802.1 MGP_WSBEiJ_G0026030.1 mouse_genomes_project 2 161172982 161205385 + MGP_WSBEiJ_P0057802 Manbal protein_coding protein_coding MGP_WSBEiJ_T0055883.1 MGP_WSBEiJ_G0025601.1 mouse_genomes_project 2 121786731 121795863 + MGP_WSBEiJ_P0055883 Itpka protein_coding protein_coding MGP_WSBEiJ_T0013396.1 MGP_WSBEiJ_G0011526.1 mouse_genomes_project 2 133982858 133983137 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056075.1 MGP_WSBEiJ_G0025629.1 mouse_genomes_project 2 123108283 123128394 - MGP_WSBEiJ_P0056075 Epb42 protein_coding protein_coding MGP_WSBEiJ_T0056076.1 MGP_WSBEiJ_G0025629.1 mouse_genomes_project 2 123108611 123118585 - Epb42 protein_coding processed_transcript MGP_WSBEiJ_T0056077.1 MGP_WSBEiJ_G0025629.1 mouse_genomes_project 2 123108611 123113195 - Epb42 protein_coding processed_transcript MGP_WSBEiJ_T0056078.1 MGP_WSBEiJ_G0025629.1 mouse_genomes_project 2 123109796 123112405 - Epb42 protein_coding retained_intron MGP_WSBEiJ_T0056079.1 MGP_WSBEiJ_G0025629.1 mouse_genomes_project 2 123114037 123128157 - MGP_WSBEiJ_P0056079 Epb42 protein_coding protein_coding MGP_WSBEiJ_T0056080.1 MGP_WSBEiJ_G0025629.1 mouse_genomes_project 2 123119031 123128003 - Epb42 protein_coding processed_transcript MGP_WSBEiJ_T0056081.1 MGP_WSBEiJ_G0025629.1 mouse_genomes_project 2 123124724 123128067 - Epb42 protein_coding processed_transcript MGP_WSBEiJ_T0007064.1 MGP_WSBEiJ_G0005796.1 mouse_genomes_project 2 28731471 28795241 + 9330198N18Rik lincRNA lincRNA MGP_WSBEiJ_T0096814.1 MGP_WSBEiJ_G0035495.1 mouse_genomes_project 2 94869839 94870588 - pseudogene pseudogene MGP_WSBEiJ_T0054712.1 MGP_WSBEiJ_G0025212.1 mouse_genomes_project 2 86560554 86561487 + MGP_WSBEiJ_P0054712 protein_coding protein_coding MGP_WSBEiJ_T0017290.1 MGP_WSBEiJ_G0014897.1 mouse_genomes_project 2 148868391 148915596 + BC039771 processed_transcript processed_transcript MGP_WSBEiJ_T0017291.1 MGP_WSBEiJ_G0014897.1 mouse_genomes_project 2 148901323 148955396 + BC039771 processed_transcript processed_transcript MGP_WSBEiJ_T0054966.1 MGP_WSBEiJ_G0025389.1 mouse_genomes_project 2 91603892 91610789 + MGP_WSBEiJ_P0054966 Kbtbd4 protein_coding protein_coding MGP_WSBEiJ_T0054967.1 MGP_WSBEiJ_G0025389.1 mouse_genomes_project 2 91603895 91610789 + MGP_WSBEiJ_P0054967 Kbtbd4 protein_coding protein_coding MGP_WSBEiJ_T0054968.1 MGP_WSBEiJ_G0025389.1 mouse_genomes_project 2 91603921 91604772 + Kbtbd4 protein_coding processed_transcript MGP_WSBEiJ_T0054969.1 MGP_WSBEiJ_G0025389.1 mouse_genomes_project 2 91604229 91605208 + Kbtbd4 protein_coding processed_transcript MGP_WSBEiJ_T0054970.1 MGP_WSBEiJ_G0025389.1 mouse_genomes_project 2 91609391 91611854 + Kbtbd4 protein_coding processed_transcript MGP_WSBEiJ_T0013095.1 MGP_WSBEiJ_G0011225.1 mouse_genomes_project 2 14717672 14718478 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058600.1 MGP_WSBEiJ_G0026232.1 mouse_genomes_project 2 185191836 185207156 + MGP_WSBEiJ_P0058600 protein_coding unknown_likely_coding MGP_WSBEiJ_T0058601.1 MGP_WSBEiJ_G0026232.1 mouse_genomes_project 2 185191851 185207127 + protein_coding retained_intron MGP_WSBEiJ_T0058602.1 MGP_WSBEiJ_G0026232.1 mouse_genomes_project 2 185191855 185201871 + protein_coding retained_intron MGP_WSBEiJ_T0058603.1 MGP_WSBEiJ_G0026232.1 mouse_genomes_project 2 185191855 185207134 + MGP_WSBEiJ_P0058603 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058604.1 MGP_WSBEiJ_G0026232.1 mouse_genomes_project 2 185199883 185204154 + protein_coding retained_intron MGP_WSBEiJ_T0058605.1 MGP_WSBEiJ_G0026232.1 mouse_genomes_project 2 185204220 185207132 + protein_coding retained_intron MGP_WSBEiJ_T0058495.1 MGP_WSBEiJ_G0026202.1 mouse_genomes_project 2 177955398 177981151 - MGP_WSBEiJ_P0058495 Ctcfl protein_coding protein_coding MGP_WSBEiJ_T0003918.1 MGP_WSBEiJ_G0003494.1 mouse_genomes_project 2 68830348 68856280 + Gm13613 antisense antisense MGP_WSBEiJ_T0052198.1 MGP_WSBEiJ_G0024725.1 mouse_genomes_project 2 23378993 23389050 - MGP_WSBEiJ_P0052198 Ccdc183 protein_coding protein_coding MGP_WSBEiJ_T0052199.1 MGP_WSBEiJ_G0024725.1 mouse_genomes_project 2 23379051 23389031 - Ccdc183 protein_coding processed_transcript MGP_WSBEiJ_T0004047.1 MGP_WSBEiJ_G0003583.1 mouse_genomes_project 2 156153935 156155359 - 1700030C14Rik antisense antisense MGP_WSBEiJ_T0055612.1 MGP_WSBEiJ_G0025517.1 mouse_genomes_project 2 113227578 113228475 + MGP_WSBEiJ_P0055612 Olfr1289 protein_coding protein_coding MGP_WSBEiJ_T0053947.1 MGP_WSBEiJ_G0025034.1 mouse_genomes_project 2 61768767 61779496 - MGP_WSBEiJ_P0053947 Gcg protein_coding protein_coding MGP_WSBEiJ_T0053948.1 MGP_WSBEiJ_G0025034.1 mouse_genomes_project 2 61771579 61779491 - MGP_WSBEiJ_P0053948 Gcg protein_coding protein_coding MGP_WSBEiJ_T0053949.1 MGP_WSBEiJ_G0025034.1 mouse_genomes_project 2 61772416 61776524 - Gcg protein_coding processed_transcript MGP_WSBEiJ_T0003917.1 MGP_WSBEiJ_G0003493.1 mouse_genomes_project 2 68044065 68045735 + Gm13596 antisense antisense MGP_WSBEiJ_T0058134.1 MGP_WSBEiJ_G0026126.1 mouse_genomes_project 2 169007191 169009331 - Spata25 protein_coding processed_transcript MGP_WSBEiJ_T0058135.1 MGP_WSBEiJ_G0026126.1 mouse_genomes_project 2 169008184 169009340 - MGP_WSBEiJ_P0058135 Spata25 protein_coding protein_coding MGP_WSBEiJ_T0010303.1 MGP_WSBEiJ_G0008460.1 mouse_genomes_project 2 161385558 161385645 - Gm23134 miRNA miRNA MGP_WSBEiJ_T0013124.1 MGP_WSBEiJ_G0011254.1 mouse_genomes_project 2 23322588 23322829 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013222.1 MGP_WSBEiJ_G0011352.1 mouse_genomes_project 2 64231113 64231665 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004048.1 MGP_WSBEiJ_G0003584.1 mouse_genomes_project 2 156511557 156513172 - Gm14199 antisense antisense MGP_WSBEiJ_T0055858.1 MGP_WSBEiJ_G0025593.1 mouse_genomes_project 2 121371187 121374345 + MGP_WSBEiJ_P0055858 Chac1 protein_coding protein_coding MGP_WSBEiJ_T0056243.1 MGP_WSBEiJ_G0025663.1 mouse_genomes_project 2 124495484 124519059 - MGP_WSBEiJ_P0056243 Duox2 protein_coding protein_coding MGP_WSBEiJ_T0056244.1 MGP_WSBEiJ_G0025663.1 mouse_genomes_project 2 124498940 124501822 - Duox2 protein_coding processed_transcript MGP_WSBEiJ_T0003841.1 MGP_WSBEiJ_G0003436.1 mouse_genomes_project 2 23378253 23405430 + Fcnaos antisense antisense MGP_WSBEiJ_T0003842.1 MGP_WSBEiJ_G0003436.1 mouse_genomes_project 2 23387380 23405430 + Fcnaos antisense antisense MGP_WSBEiJ_T0003843.1 MGP_WSBEiJ_G0003436.1 mouse_genomes_project 2 23400581 23405431 + Fcnaos antisense antisense MGP_WSBEiJ_T0003844.1 MGP_WSBEiJ_G0003436.1 mouse_genomes_project 2 23404318 23405433 + Fcnaos antisense antisense MGP_WSBEiJ_T0010210.1 MGP_WSBEiJ_G0008367.1 mouse_genomes_project 2 11717548 11717627 + Mir511 miRNA miRNA MGP_WSBEiJ_T0100739.1 MGP_WSBEiJ_G0039197.1 mouse_genomes_project 2 124257400 124259754 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0052947.1 MGP_WSBEiJ_G0024852.1 mouse_genomes_project 2 29832402 29848162 + MGP_WSBEiJ_P0052947 Prdm12 protein_coding protein_coding MGP_WSBEiJ_T0013510.1 MGP_WSBEiJ_G0011640.1 mouse_genomes_project 2 185113361 185113758 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053430.1 MGP_WSBEiJ_G0024926.1 mouse_genomes_project 2 34576506 34595759 - MGP_WSBEiJ_P0053430 Rbm18 protein_coding protein_coding MGP_WSBEiJ_T0053431.1 MGP_WSBEiJ_G0024926.1 mouse_genomes_project 2 34578027 34597361 - MGP_WSBEiJ_P0053431 Rbm18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053432.1 MGP_WSBEiJ_G0024926.1 mouse_genomes_project 2 34578202 34597400 - MGP_WSBEiJ_P0053432 Rbm18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053433.1 MGP_WSBEiJ_G0024926.1 mouse_genomes_project 2 34587004 34597396 - Rbm18 protein_coding retained_intron MGP_WSBEiJ_T0001039.1 MGP_WSBEiJ_G0000974.1 mouse_genomes_project 2 36477211 36482404 + TEC TEC MGP_WSBEiJ_T0055947.1 MGP_WSBEiJ_G0025611.1 mouse_genomes_project 2 122158722 122224867 - MGP_WSBEiJ_P0055947 Ehd4 protein_coding protein_coding MGP_WSBEiJ_T0055948.1 MGP_WSBEiJ_G0025611.1 mouse_genomes_project 2 122172267 122199805 - Ehd4 protein_coding processed_transcript MGP_WSBEiJ_T0055949.1 MGP_WSBEiJ_G0025611.1 mouse_genomes_project 2 122172452 122207653 - Ehd4 protein_coding processed_transcript MGP_WSBEiJ_T0055950.1 MGP_WSBEiJ_G0025611.1 mouse_genomes_project 2 122192480 122224723 - Ehd4 protein_coding processed_transcript MGP_WSBEiJ_T0057296.1 MGP_WSBEiJ_G0025931.1 mouse_genomes_project 2 156460056 156470460 - MGP_WSBEiJ_P0057296 Dusp15 protein_coding protein_coding MGP_WSBEiJ_T0057297.1 MGP_WSBEiJ_G0025931.1 mouse_genomes_project 2 156460081 156463616 - Dusp15 protein_coding retained_intron MGP_WSBEiJ_T0057298.1 MGP_WSBEiJ_G0025931.1 mouse_genomes_project 2 156463992 156470586 - MGP_WSBEiJ_P0057298 Dusp15 protein_coding protein_coding MGP_WSBEiJ_T0057299.1 MGP_WSBEiJ_G0025931.1 mouse_genomes_project 2 156464036 156470702 - MGP_WSBEiJ_P0057299 Dusp15 protein_coding protein_coding MGP_WSBEiJ_T0010223.1 MGP_WSBEiJ_G0008380.1 mouse_genomes_project 2 25279649 25279749 + Gm24049 miRNA miRNA MGP_WSBEiJ_T0054499.1 MGP_WSBEiJ_G0025143.1 mouse_genomes_project 2 79975181 80083619 + MGP_WSBEiJ_P0054499 Ppp1r1c protein_coding protein_coding MGP_WSBEiJ_T0054500.1 MGP_WSBEiJ_G0025143.1 mouse_genomes_project 2 79975323 80081854 + MGP_WSBEiJ_P0054500 Ppp1r1c protein_coding protein_coding MGP_WSBEiJ_T0054501.1 MGP_WSBEiJ_G0025143.1 mouse_genomes_project 2 79975324 80088922 + MGP_WSBEiJ_P0054501 Ppp1r1c protein_coding protein_coding MGP_WSBEiJ_T0054502.1 MGP_WSBEiJ_G0025143.1 mouse_genomes_project 2 79975463 80091815 + Ppp1r1c protein_coding processed_transcript MGP_WSBEiJ_T0054503.1 MGP_WSBEiJ_G0025143.1 mouse_genomes_project 2 80058297 80082610 + Ppp1r1c protein_coding processed_transcript MGP_WSBEiJ_T0054984.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765153 91770577 + MGP_WSBEiJ_P0054984 Psmc3 protein_coding protein_coding MGP_WSBEiJ_T0054985.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765199 91777511 + MGP_WSBEiJ_P0054985 Psmc3 protein_coding protein_coding MGP_WSBEiJ_T0054986.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765239 91767080 + Psmc3 protein_coding processed_transcript MGP_WSBEiJ_T0054987.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765244 91770577 + MGP_WSBEiJ_P0054987 Psmc3 protein_coding protein_coding MGP_WSBEiJ_T0054988.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765422 91768990 + MGP_WSBEiJ_P0054988 Psmc3 protein_coding protein_coding MGP_WSBEiJ_T0054989.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765445 91768141 + MGP_WSBEiJ_P0054989 Psmc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054990.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765526 91766863 + Psmc3 protein_coding processed_transcript MGP_WSBEiJ_T0054991.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765622 91766698 + Psmc3 protein_coding processed_transcript MGP_WSBEiJ_T0054992.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91765717 91767073 + Psmc3 protein_coding processed_transcript MGP_WSBEiJ_T0054993.1 MGP_WSBEiJ_G0025392.1 mouse_genomes_project 2 91769253 91770579 + Psmc3 protein_coding processed_transcript MGP_WSBEiJ_T0055664.1 MGP_WSBEiJ_G0025546.1 mouse_genomes_project 2 115013525 115029625 + MGP_WSBEiJ_P0055664 Tmco5b protein_coding protein_coding MGP_WSBEiJ_T0051814.1 MGP_WSBEiJ_G0024659.1 mouse_genomes_project 2 20389669 20510096 + MGP_WSBEiJ_P0051814 Apbb1ip protein_coding protein_coding MGP_WSBEiJ_T0051815.1 MGP_WSBEiJ_G0024659.1 mouse_genomes_project 2 20403437 20469744 + Apbb1ip protein_coding processed_transcript MGP_WSBEiJ_T0051816.1 MGP_WSBEiJ_G0024659.1 mouse_genomes_project 2 20403733 20488705 + Apbb1ip protein_coding processed_transcript MGP_WSBEiJ_T0051817.1 MGP_WSBEiJ_G0024659.1 mouse_genomes_project 2 20403788 20462198 + Apbb1ip protein_coding retained_intron MGP_WSBEiJ_T0057177.1 MGP_WSBEiJ_G0025888.1 mouse_genomes_project 2 154464422 154474864 - MGP_WSBEiJ_P0057177 protein_coding protein_coding MGP_WSBEiJ_T0057179.1 MGP_WSBEiJ_G0025888.1 mouse_genomes_project 2 154465494 154474828 - protein_coding processed_transcript MGP_WSBEiJ_T0001022.1 MGP_WSBEiJ_G0000957.1 mouse_genomes_project 2 12521725 12524109 - TEC TEC MGP_WSBEiJ_T0001031.1 MGP_WSBEiJ_G0000966.1 mouse_genomes_project 2 31944886 31945165 + TEC TEC MGP_WSBEiJ_T0058503.1 MGP_WSBEiJ_G0026205.1 mouse_genomes_project 2 178090895 178150136 - MGP_WSBEiJ_P0058503 Pmepa1 protein_coding protein_coding MGP_WSBEiJ_T0058504.1 MGP_WSBEiJ_G0026205.1 mouse_genomes_project 2 178094491 178149792 - MGP_WSBEiJ_P0058504 Pmepa1 protein_coding protein_coding MGP_WSBEiJ_T0058505.1 MGP_WSBEiJ_G0026205.1 mouse_genomes_project 2 178094656 178102847 - Pmepa1 protein_coding retained_intron MGP_WSBEiJ_T0013409.1 MGP_WSBEiJ_G0011539.1 mouse_genomes_project 2 139624909 139625379 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053489.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35878590 35932140 + MGP_WSBEiJ_P0053489 Rabgap1 protein_coding protein_coding MGP_WSBEiJ_T0053490.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35878596 36003971 + MGP_WSBEiJ_P0053490 Rabgap1 protein_coding protein_coding MGP_WSBEiJ_T0053491.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35878607 35924719 + Rabgap1 protein_coding retained_intron MGP_WSBEiJ_T0053492.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35887397 35889550 + Rabgap1 protein_coding processed_transcript MGP_WSBEiJ_T0053493.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35888006 35911421 + MGP_WSBEiJ_P0053493 Rabgap1 protein_coding protein_coding MGP_WSBEiJ_T0053494.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35888006 35982520 + MGP_WSBEiJ_P0053494 Rabgap1 protein_coding protein_coding MGP_WSBEiJ_T0053495.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35888028 36003988 + MGP_WSBEiJ_P0053495 Rabgap1 protein_coding protein_coding MGP_WSBEiJ_T0053497.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35927379 35930497 + Rabgap1 protein_coding retained_intron MGP_WSBEiJ_T0053498.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35928481 35946379 + Rabgap1 protein_coding processed_transcript MGP_WSBEiJ_T0053500.1 MGP_WSBEiJ_G0024960.1 mouse_genomes_project 2 35954278 36002586 + Rabgap1 protein_coding processed_transcript MGP_WSBEiJ_T0054819.1 MGP_WSBEiJ_G0025306.1 mouse_genomes_project 2 89096496 89097468 + MGP_WSBEiJ_P0054819 Olfr1178 protein_coding protein_coding MGP_WSBEiJ_T0100707.1 MGP_WSBEiJ_G0039165.1 mouse_genomes_project 2 86570239 86571164 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0055488.1 MGP_WSBEiJ_G0025479.1 mouse_genomes_project 2 106527393 106579562 + MGP_WSBEiJ_P0055488 Wt1 protein_coding protein_coding MGP_WSBEiJ_T0055489.1 MGP_WSBEiJ_G0025479.1 mouse_genomes_project 2 106527860 106578294 + MGP_WSBEiJ_P0055489 Wt1 protein_coding protein_coding MGP_WSBEiJ_T0055490.1 MGP_WSBEiJ_G0025479.1 mouse_genomes_project 2 106527865 106578296 + MGP_WSBEiJ_P0055490 Wt1 protein_coding protein_coding MGP_WSBEiJ_T0055491.1 MGP_WSBEiJ_G0025479.1 mouse_genomes_project 2 106527865 106578217 + MGP_WSBEiJ_P0055491 Wt1 protein_coding protein_coding MGP_WSBEiJ_T0055492.1 MGP_WSBEiJ_G0025479.1 mouse_genomes_project 2 106531663 106535997 + Wt1 protein_coding retained_intron MGP_WSBEiJ_T0055493.1 MGP_WSBEiJ_G0025479.1 mouse_genomes_project 2 106531746 106579566 + MGP_WSBEiJ_P0055493 Wt1 protein_coding protein_coding MGP_WSBEiJ_T0055494.1 MGP_WSBEiJ_G0025479.1 mouse_genomes_project 2 106531746 106579562 + MGP_WSBEiJ_P0055494 Wt1 protein_coding protein_coding MGP_WSBEiJ_T0055495.1 MGP_WSBEiJ_G0025479.1 mouse_genomes_project 2 106568738 106575999 + Wt1 protein_coding retained_intron MGP_WSBEiJ_T0097035.1 MGP_WSBEiJ_G0035716.1 mouse_genomes_project 2 168270106 168270224 - n-R5s207 rRNA rRNA MGP_WSBEiJ_T0055626.1 MGP_WSBEiJ_G0025531.1 mouse_genomes_project 2 113740130 113741084 - MGP_WSBEiJ_P0055626 Olfr1312 protein_coding protein_coding MGP_WSBEiJ_T0054829.1 MGP_WSBEiJ_G0025315.1 mouse_genomes_project 2 89432814 89433943 + MGP_WSBEiJ_P0054829 Olfr1193 protein_coding protein_coding MGP_WSBEiJ_T0013211.1 MGP_WSBEiJ_G0011341.1 mouse_genomes_project 2 58528412 58529208 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099328.1 MGP_WSBEiJ_G0037991.1 mouse_genomes_project 2 8329090 8329219 - Gm23877 snoRNA snoRNA MGP_WSBEiJ_T0054716.1 MGP_WSBEiJ_G0025216.1 mouse_genomes_project 2 86662383 86663325 - MGP_WSBEiJ_P0054716 Olfr1042 protein_coding protein_coding MGP_WSBEiJ_T0003909.1 MGP_WSBEiJ_G0003485.1 mouse_genomes_project 2 64620299 64621219 + Gm13594 antisense antisense MGP_WSBEiJ_T0013118.1 MGP_WSBEiJ_G0011248.1 mouse_genomes_project 2 21362637 21363541 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052024.1 MGP_WSBEiJ_G0024696.1 mouse_genomes_project 2 22980157 22983385 + MGP_WSBEiJ_P0052024 Rnf208 protein_coding protein_coding MGP_WSBEiJ_T0052025.1 MGP_WSBEiJ_G0024696.1 mouse_genomes_project 2 22981378 22982521 + MGP_WSBEiJ_P0052025 Rnf208 protein_coding protein_coding MGP_WSBEiJ_T0052026.1 MGP_WSBEiJ_G0024696.1 mouse_genomes_project 2 22982061 22983386 + MGP_WSBEiJ_P0052026 Rnf208 protein_coding protein_coding MGP_WSBEiJ_T0058288.1 MGP_WSBEiJ_G0026151.1 mouse_genomes_project 2 171124691 171130414 + MGP_WSBEiJ_P0058288 protein_coding protein_coding MGP_WSBEiJ_T0058290.1 MGP_WSBEiJ_G0026151.1 mouse_genomes_project 2 171129711 171130414 + protein_coding processed_transcript MGP_WSBEiJ_T0013070.1 MGP_WSBEiJ_G0011200.1 mouse_genomes_project 2 3260871 3262414 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098106.1 MGP_WSBEiJ_G0036769.1 mouse_genomes_project 2 74509547 74509654 + Gm22975 snRNA snRNA MGP_WSBEiJ_T0054898.1 MGP_WSBEiJ_G0025369.1 mouse_genomes_project 2 90774671 90778977 + MGP_WSBEiJ_P0054898 Olfr1260 protein_coding protein_coding MGP_WSBEiJ_T0054899.1 MGP_WSBEiJ_G0025369.1 mouse_genomes_project 2 90774678 90778457 + Olfr1260 protein_coding processed_transcript MGP_WSBEiJ_T0054900.1 MGP_WSBEiJ_G0025369.1 mouse_genomes_project 2 90774681 90778407 + MGP_WSBEiJ_P0054900 Olfr1260 protein_coding protein_coding MGP_WSBEiJ_T0054901.1 MGP_WSBEiJ_G0025369.1 mouse_genomes_project 2 90774687 90778464 + Olfr1260 protein_coding processed_transcript MGP_WSBEiJ_T0054902.1 MGP_WSBEiJ_G0025369.1 mouse_genomes_project 2 90778044 90778977 + MGP_WSBEiJ_P0054902 Olfr1260 protein_coding protein_coding MGP_WSBEiJ_T0011304.1 MGP_WSBEiJ_G0009461.1 mouse_genomes_project 2 73706791 73706958 - Gm27421 misc_RNA misc_RNA MGP_WSBEiJ_T0053369.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33583848 33585770 - Rab14 protein_coding processed_transcript MGP_WSBEiJ_T0053370.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33583989 33602863 - MGP_WSBEiJ_P0053370 Rab14 protein_coding protein_coding MGP_WSBEiJ_T0053371.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33584909 33585868 - Rab14 protein_coding processed_transcript MGP_WSBEiJ_T0053372.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33585322 33602722 - Rab14 protein_coding retained_intron MGP_WSBEiJ_T0053373.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33588006 33594370 - Rab14 protein_coding processed_transcript MGP_WSBEiJ_T0053374.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33589427 33593126 - Rab14 protein_coding retained_intron MGP_WSBEiJ_T0053375.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33591621 33602539 - Rab14 protein_coding processed_transcript MGP_WSBEiJ_T0053376.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33593225 33594550 - Rab14 protein_coding processed_transcript MGP_WSBEiJ_T0053377.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33597729 33602732 - Rab14 protein_coding retained_intron MGP_WSBEiJ_T0053378.1 MGP_WSBEiJ_G0024915.1 mouse_genomes_project 2 33601623 33602728 - Rab14 protein_coding processed_transcript MGP_WSBEiJ_T0054063.1 MGP_WSBEiJ_G0025056.1 mouse_genomes_project 2 68224221 68256217 + MGP_WSBEiJ_P0054063 4932414N04Rik protein_coding protein_coding MGP_WSBEiJ_T0054064.1 MGP_WSBEiJ_G0025056.1 mouse_genomes_project 2 68225619 68313575 + MGP_WSBEiJ_P0054064 4932414N04Rik protein_coding protein_coding MGP_WSBEiJ_T0054065.1 MGP_WSBEiJ_G0025056.1 mouse_genomes_project 2 68225648 68244363 + 4932414N04Rik protein_coding processed_transcript MGP_WSBEiJ_T0054066.1 MGP_WSBEiJ_G0025056.1 mouse_genomes_project 2 68228750 68313573 + MGP_WSBEiJ_P0054066 4932414N04Rik protein_coding protein_coding MGP_WSBEiJ_T0054067.1 MGP_WSBEiJ_G0025056.1 mouse_genomes_project 2 68288544 68289544 + 4932414N04Rik protein_coding retained_intron MGP_WSBEiJ_T0056162.1 MGP_WSBEiJ_G0025640.1 mouse_genomes_project 2 123462726 123479978 - MGP_WSBEiJ_P0056162 Strc protein_coding protein_coding MGP_WSBEiJ_T0056163.1 MGP_WSBEiJ_G0025640.1 mouse_genomes_project 2 123467426 123474066 - MGP_WSBEiJ_P0056163 Strc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056164.1 MGP_WSBEiJ_G0025640.1 mouse_genomes_project 2 123471925 123474050 - Strc protein_coding processed_transcript MGP_WSBEiJ_T0056165.1 MGP_WSBEiJ_G0025640.1 mouse_genomes_project 2 123472004 123473829 - Strc protein_coding retained_intron MGP_WSBEiJ_T0056166.1 MGP_WSBEiJ_G0025640.1 mouse_genomes_project 2 123475382 123487177 - Strc protein_coding retained_intron MGP_WSBEiJ_T0013273.1 MGP_WSBEiJ_G0011403.1 mouse_genomes_project 2 82924328 82924919 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099405.1 MGP_WSBEiJ_G0038068.1 mouse_genomes_project 2 168789381 168789512 + Gm24473 snoRNA snoRNA MGP_WSBEiJ_T0054494.1 MGP_WSBEiJ_G0025142.1 mouse_genomes_project 2 79902642 79940561 + MGP_WSBEiJ_P0054494 Ssfa2 protein_coding protein_coding MGP_WSBEiJ_T0054495.1 MGP_WSBEiJ_G0025142.1 mouse_genomes_project 2 79902716 79940561 + MGP_WSBEiJ_P0054495 Ssfa2 protein_coding protein_coding MGP_WSBEiJ_T0054496.1 MGP_WSBEiJ_G0025142.1 mouse_genomes_project 2 79902745 79940561 + MGP_WSBEiJ_P0054496 Ssfa2 protein_coding protein_coding MGP_WSBEiJ_T0054497.1 MGP_WSBEiJ_G0025142.1 mouse_genomes_project 2 79902751 79903736 + Ssfa2 protein_coding processed_transcript MGP_WSBEiJ_T0054498.1 MGP_WSBEiJ_G0025142.1 mouse_genomes_project 2 79906483 79940561 + Ssfa2 protein_coding processed_transcript MGP_WSBEiJ_T0054400.1 MGP_WSBEiJ_G0025130.1 mouse_genomes_project 2 76639513 76642463 + MGP_WSBEiJ_P0054400 Dfnb59 protein_coding protein_coding MGP_WSBEiJ_T0054401.1 MGP_WSBEiJ_G0025130.1 mouse_genomes_project 2 76639536 76649393 + MGP_WSBEiJ_P0054401 Dfnb59 protein_coding protein_coding MGP_WSBEiJ_T0054402.1 MGP_WSBEiJ_G0025130.1 mouse_genomes_project 2 76641310 76652164 + MGP_WSBEiJ_P0054402 Dfnb59 protein_coding protein_coding MGP_WSBEiJ_T0055815.1 MGP_WSBEiJ_G0025582.1 mouse_genomes_project 2 121112069 121120867 + MGP_WSBEiJ_P0055815 Rad51 protein_coding protein_coding MGP_WSBEiJ_T0055816.1 MGP_WSBEiJ_G0025582.1 mouse_genomes_project 2 121112083 121134602 + MGP_WSBEiJ_P0055816 Rad51 protein_coding protein_coding MGP_WSBEiJ_T0055817.1 MGP_WSBEiJ_G0025582.1 mouse_genomes_project 2 121112090 121130915 + Rad51 protein_coding retained_intron MGP_WSBEiJ_T0055818.1 MGP_WSBEiJ_G0025582.1 mouse_genomes_project 2 121112093 121134350 + MGP_WSBEiJ_P0055818 Rad51 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055819.1 MGP_WSBEiJ_G0025582.1 mouse_genomes_project 2 121117761 121119213 + Rad51 protein_coding retained_intron MGP_WSBEiJ_T0055820.1 MGP_WSBEiJ_G0025582.1 mouse_genomes_project 2 121120753 121146046 + MGP_WSBEiJ_P0055820 Rad51 protein_coding protein_coding MGP_WSBEiJ_T0055821.1 MGP_WSBEiJ_G0025582.1 mouse_genomes_project 2 121128825 121131775 + Rad51 protein_coding retained_intron MGP_WSBEiJ_T0055822.1 MGP_WSBEiJ_G0025582.1 mouse_genomes_project 2 121131481 121132528 + Rad51 protein_coding retained_intron MGP_WSBEiJ_T0013382.1 MGP_WSBEiJ_G0011512.1 mouse_genomes_project 2 127479036 127479136 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004062.1 MGP_WSBEiJ_G0003597.1 mouse_genomes_project 2 162481826 162482737 - Gm14205 antisense antisense MGP_WSBEiJ_T0004092.1 MGP_WSBEiJ_G0003619.1 mouse_genomes_project 2 175055564 175058815 + Bcas1os1 antisense antisense MGP_WSBEiJ_T0051426.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3684875 4576559 - MGP_WSBEiJ_P0051426 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051427.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3684886 4032269 - MGP_WSBEiJ_P0051427 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051428.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3684886 4032269 - MGP_WSBEiJ_P0051428 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051429.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3684886 3873124 - MGP_WSBEiJ_P0051429 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051430.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3687043 4032269 - MGP_WSBEiJ_P0051430 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051431.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3688592 4242719 - MGP_WSBEiJ_P0051431 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051432.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3689931 4032220 - MGP_WSBEiJ_P0051432 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051433.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3689945 3873124 - MGP_WSBEiJ_P0051433 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051434.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3689945 4242659 - MGP_WSBEiJ_P0051434 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051435.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3690740 3873437 - MGP_WSBEiJ_P0051435 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051436.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3691345 3873122 - MGP_WSBEiJ_P0051436 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051437.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3691345 3873122 - MGP_WSBEiJ_P0051437 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051438.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3691439 4032219 - MGP_WSBEiJ_P0051438 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051439.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3692733 4019220 - MGP_WSBEiJ_P0051439 Celf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051440.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3692746 3739914 - Celf2 protein_coding processed_transcript MGP_WSBEiJ_T0051441.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3699762 4576452 - MGP_WSBEiJ_P0051441 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051442.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3733532 3873124 - Celf2 protein_coding retained_intron MGP_WSBEiJ_T0051443.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3751703 3764554 - Celf2 protein_coding processed_transcript MGP_WSBEiJ_T0051444.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3755297 4031901 - Celf2 protein_coding processed_transcript MGP_WSBEiJ_T0051445.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3764102 4576758 - MGP_WSBEiJ_P0051445 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051446.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3768610 4032165 - Celf2 protein_coding retained_intron MGP_WSBEiJ_T0051447.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3771912 3873725 - Celf2 protein_coding retained_intron MGP_WSBEiJ_T0051448.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3773088 4018595 - MGP_WSBEiJ_P0051448 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051449.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3811406 4032165 - Celf2 protein_coding retained_intron MGP_WSBEiJ_T0051450.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3815115 4242624 - MGP_WSBEiJ_P0051450 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051451.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 3872964 3873718 - MGP_WSBEiJ_P0051451 Celf2 protein_coding protein_coding MGP_WSBEiJ_T0051452.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 4237874 4242730 - Celf2 protein_coding processed_transcript MGP_WSBEiJ_T0051453.1 MGP_WSBEiJ_G0024598.1 mouse_genomes_project 2 4574634 4677757 - Celf2 protein_coding processed_transcript MGP_WSBEiJ_T0100736.1 MGP_WSBEiJ_G0039194.1 mouse_genomes_project 2 108592103 108592297 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098116.1 MGP_WSBEiJ_G0036779.1 mouse_genomes_project 2 115017588 115017750 + Gm26505 snRNA snRNA MGP_WSBEiJ_T0011299.1 MGP_WSBEiJ_G0009456.1 mouse_genomes_project 2 43991879 43992080 + Vis1 misc_RNA misc_RNA MGP_WSBEiJ_T0052219.1 MGP_WSBEiJ_G0024732.1 mouse_genomes_project 2 23477346 23480612 + MGP_WSBEiJ_P0052219 Obp2a protein_coding protein_coding MGP_WSBEiJ_T0017154.1 MGP_WSBEiJ_G0014822.1 mouse_genomes_project 2 24196441 24215779 + Gm13562 processed_transcript processed_transcript MGP_WSBEiJ_T0017155.1 MGP_WSBEiJ_G0014822.1 mouse_genomes_project 2 24209293 24213560 + Gm13562 processed_transcript processed_transcript MGP_WSBEiJ_T0099399.1 MGP_WSBEiJ_G0038062.1 mouse_genomes_project 2 162219176 162219289 - Gm26003 snoRNA snoRNA MGP_WSBEiJ_T0013292.1 MGP_WSBEiJ_G0011422.1 mouse_genomes_project 2 88050939 88052101 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054221.1 MGP_WSBEiJ_G0025086.1 mouse_genomes_project 2 71111959 71177193 + MGP_WSBEiJ_P0054221 Hat1 protein_coding protein_coding MGP_WSBEiJ_T0054222.1 MGP_WSBEiJ_G0025086.1 mouse_genomes_project 2 71112261 71177193 + MGP_WSBEiJ_P0054222 Hat1 protein_coding protein_coding MGP_WSBEiJ_T0054223.1 MGP_WSBEiJ_G0025086.1 mouse_genomes_project 2 71150532 71174374 + Hat1 protein_coding processed_transcript MGP_WSBEiJ_T0057218.1 MGP_WSBEiJ_G0025899.1 mouse_genomes_project 2 155560751 155576297 + MGP_WSBEiJ_P0057218 Scrt2 protein_coding protein_coding MGP_WSBEiJ_T0053462.1 MGP_WSBEiJ_G0024947.1 mouse_genomes_project 2 35442061 35442988 + MGP_WSBEiJ_P0053462 Olfr357 protein_coding protein_coding MGP_WSBEiJ_T0013205.1 MGP_WSBEiJ_G0011335.1 mouse_genomes_project 2 57482795 57483277 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054681.1 MGP_WSBEiJ_G0025184.1 mouse_genomes_project 2 85580787 85616497 - MGP_WSBEiJ_P0054681 Lrrc55 protein_coding protein_coding MGP_WSBEiJ_T0054682.1 MGP_WSBEiJ_G0025184.1 mouse_genomes_project 2 85607862 85616497 - MGP_WSBEiJ_P0054682 Lrrc55 protein_coding protein_coding MGP_WSBEiJ_T0017218.1 MGP_WSBEiJ_G0014864.1 mouse_genomes_project 2 91924417 91933488 - Gm13783 processed_transcript processed_transcript MGP_WSBEiJ_T0055730.1 MGP_WSBEiJ_G0025561.1 mouse_genomes_project 2 119185907 119253448 - MGP_WSBEiJ_P0055730 Rasgrp1 protein_coding protein_coding MGP_WSBEiJ_T0055731.1 MGP_WSBEiJ_G0025561.1 mouse_genomes_project 2 119185908 119253324 - MGP_WSBEiJ_P0055731 Rasgrp1 protein_coding protein_coding MGP_WSBEiJ_T0055732.1 MGP_WSBEiJ_G0025561.1 mouse_genomes_project 2 119188458 119253156 - MGP_WSBEiJ_P0055732 Rasgrp1 protein_coding protein_coding MGP_WSBEiJ_T0055733.1 MGP_WSBEiJ_G0025561.1 mouse_genomes_project 2 119188458 119253156 - MGP_WSBEiJ_P0055733 Rasgrp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055734.1 MGP_WSBEiJ_G0025561.1 mouse_genomes_project 2 119188458 119253156 - MGP_WSBEiJ_P0055734 Rasgrp1 protein_coding protein_coding MGP_WSBEiJ_T0055735.1 MGP_WSBEiJ_G0025561.1 mouse_genomes_project 2 119188458 119253156 - MGP_WSBEiJ_P0055735 Rasgrp1 protein_coding protein_coding MGP_WSBEiJ_T0055736.1 MGP_WSBEiJ_G0025561.1 mouse_genomes_project 2 119207624 119253372 - Rasgrp1 protein_coding retained_intron MGP_WSBEiJ_T0052495.1 MGP_WSBEiJ_G0024783.1 mouse_genomes_project 2 25805503 25960797 + MGP_WSBEiJ_P0052495 Col5a1 protein_coding protein_coding MGP_WSBEiJ_T0052496.1 MGP_WSBEiJ_G0024783.1 mouse_genomes_project 2 25937807 25957285 + MGP_WSBEiJ_P0052496 Col5a1 protein_coding protein_coding MGP_WSBEiJ_T0057844.1 MGP_WSBEiJ_G0026038.1 mouse_genomes_project 2 161970507 162001907 - MGP_WSBEiJ_P0057844 Tgm2 protein_coding protein_coding MGP_WSBEiJ_T0057845.1 MGP_WSBEiJ_G0026038.1 mouse_genomes_project 2 161982519 162001864 - MGP_WSBEiJ_P0057845 Tgm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057846.1 MGP_WSBEiJ_G0026038.1 mouse_genomes_project 2 161985538 162001837 - Tgm2 protein_coding retained_intron MGP_WSBEiJ_T0057847.1 MGP_WSBEiJ_G0026038.1 mouse_genomes_project 2 161989482 161994903 - Tgm2 protein_coding processed_transcript MGP_WSBEiJ_T0053758.1 MGP_WSBEiJ_G0025002.1 mouse_genomes_project 2 52150301 52204888 - MGP_WSBEiJ_P0053758 Prpf40a protein_coding protein_coding MGP_WSBEiJ_T0053759.1 MGP_WSBEiJ_G0025002.1 mouse_genomes_project 2 52154799 52160941 - Prpf40a protein_coding processed_transcript MGP_WSBEiJ_T0053760.1 MGP_WSBEiJ_G0025002.1 mouse_genomes_project 2 52168724 52204947 - MGP_WSBEiJ_P0053760 Prpf40a protein_coding protein_coding MGP_WSBEiJ_T0053761.1 MGP_WSBEiJ_G0025002.1 mouse_genomes_project 2 52189794 52204888 - Prpf40a protein_coding processed_transcript MGP_WSBEiJ_T0013108.1 MGP_WSBEiJ_G0011238.1 mouse_genomes_project 2 17679734 17680533 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003911.1 MGP_WSBEiJ_G0003487.1 mouse_genomes_project 2 65268983 65277193 - Gm13619 antisense antisense MGP_WSBEiJ_T0003938.1 MGP_WSBEiJ_G0003509.1 mouse_genomes_project 2 74589235 74600785 - Hoxd3os1 antisense antisense MGP_WSBEiJ_T0003939.1 MGP_WSBEiJ_G0003509.1 mouse_genomes_project 2 74597314 74601257 - Hoxd3os1 antisense antisense MGP_WSBEiJ_T0003940.1 MGP_WSBEiJ_G0003509.1 mouse_genomes_project 2 74597464 74604710 - Hoxd3os1 antisense antisense MGP_WSBEiJ_T0003941.1 MGP_WSBEiJ_G0003509.1 mouse_genomes_project 2 74601856 74604844 - Hoxd3os1 antisense antisense MGP_WSBEiJ_T0052988.1 MGP_WSBEiJ_G0024860.1 mouse_genomes_project 2 30281465 30318006 - MGP_WSBEiJ_P0052988 Fam78a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052991.1 MGP_WSBEiJ_G0024860.1 mouse_genomes_project 2 30299476 30317111 - MGP_WSBEiJ_P0052991 Fam78a protein_coding protein_coding MGP_WSBEiJ_T0052992.1 MGP_WSBEiJ_G0024860.1 mouse_genomes_project 2 30302029 30312680 - Fam78a protein_coding processed_transcript MGP_WSBEiJ_T0052993.1 MGP_WSBEiJ_G0024860.1 mouse_genomes_project 2 30316599 30318194 - Fam78a protein_coding processed_transcript MGP_WSBEiJ_T0010282.1 MGP_WSBEiJ_G0008439.1 mouse_genomes_project 2 122088377 122088440 + Mir7665 miRNA miRNA MGP_WSBEiJ_T0013198.1 MGP_WSBEiJ_G0011328.1 mouse_genomes_project 2 55012011 55014300 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056236.1 MGP_WSBEiJ_G0025658.1 mouse_genomes_project 2 124325498 124396122 - MGP_WSBEiJ_P0056236 Patl2 protein_coding protein_coding MGP_WSBEiJ_T0057948.1 MGP_WSBEiJ_G0026060.1 mouse_genomes_project 2 165521907 166686682 - MGP_WSBEiJ_P0057948 Ptprt protein_coding protein_coding MGP_WSBEiJ_T0057949.1 MGP_WSBEiJ_G0026060.1 mouse_genomes_project 2 165521907 166686682 - MGP_WSBEiJ_P0057949 Ptprt protein_coding protein_coding MGP_WSBEiJ_T0057950.1 MGP_WSBEiJ_G0026060.1 mouse_genomes_project 2 165526272 166686629 - MGP_WSBEiJ_P0057950 Ptprt protein_coding protein_coding MGP_WSBEiJ_T0057951.1 MGP_WSBEiJ_G0026060.1 mouse_genomes_project 2 165527466 166686682 - MGP_WSBEiJ_P0057951 Ptprt protein_coding protein_coding MGP_WSBEiJ_T0057952.1 MGP_WSBEiJ_G0026060.1 mouse_genomes_project 2 165701596 165803074 - Ptprt protein_coding processed_transcript MGP_WSBEiJ_T0057953.1 MGP_WSBEiJ_G0026060.1 mouse_genomes_project 2 166026025 166151872 - Ptprt protein_coding processed_transcript MGP_WSBEiJ_T0057547.1 MGP_WSBEiJ_G0025992.1 mouse_genomes_project 2 159484624 159527041 + MGP_WSBEiJ_P0057547 Mmp24 protein_coding protein_coding MGP_WSBEiJ_T0057548.1 MGP_WSBEiJ_G0025992.1 mouse_genomes_project 2 159515708 159519052 + Mmp24 protein_coding retained_intron MGP_WSBEiJ_T0003814.1 MGP_WSBEiJ_G0003412.1 mouse_genomes_project 2 2085854 2089578 + 4930551O13Rik antisense antisense MGP_WSBEiJ_T0001054.1 MGP_WSBEiJ_G0000989.1 mouse_genomes_project 2 68582414 68586188 + TEC TEC MGP_WSBEiJ_T0054831.1 MGP_WSBEiJ_G0025317.1 mouse_genomes_project 2 89508151 89549743 - MGP_WSBEiJ_P0054831 protein_coding protein_coding MGP_WSBEiJ_T0055571.1 MGP_WSBEiJ_G0025494.1 mouse_genomes_project 2 111507186 111609898 + MGP_WSBEiJ_P0055571 Lgr4 protein_coding protein_coding MGP_WSBEiJ_T0055572.1 MGP_WSBEiJ_G0025494.1 mouse_genomes_project 2 111507186 111609898 + MGP_WSBEiJ_P0055572 Lgr4 protein_coding protein_coding MGP_WSBEiJ_T0055573.1 MGP_WSBEiJ_G0025494.1 mouse_genomes_project 2 111568457 111592356 + Lgr4 protein_coding processed_transcript MGP_WSBEiJ_T0055574.1 MGP_WSBEiJ_G0025494.1 mouse_genomes_project 2 111595021 111595954 + Lgr4 protein_coding retained_intron MGP_WSBEiJ_T0007281.1 MGP_WSBEiJ_G0005975.1 mouse_genomes_project 2 170691577 170709995 - Gm14268 lincRNA lincRNA MGP_WSBEiJ_T0007282.1 MGP_WSBEiJ_G0005975.1 mouse_genomes_project 2 170691863 170710025 - Gm14268 lincRNA lincRNA MGP_WSBEiJ_T0003898.1 MGP_WSBEiJ_G0003478.1 mouse_genomes_project 2 57300493 57317551 + Gm13546 antisense antisense MGP_WSBEiJ_T0003899.1 MGP_WSBEiJ_G0003478.1 mouse_genomes_project 2 57310239 57316825 + Gm13546 antisense antisense MGP_WSBEiJ_T0054768.1 MGP_WSBEiJ_G0025266.1 mouse_genomes_project 2 87930502 87965379 + MGP_WSBEiJ_P0054768 protein_coding protein_coding MGP_WSBEiJ_T0052448.1 MGP_WSBEiJ_G0024774.1 mouse_genomes_project 2 24929641 24940901 - MGP_WSBEiJ_P0052448 Tmem8c protein_coding protein_coding MGP_WSBEiJ_T0052449.1 MGP_WSBEiJ_G0024774.1 mouse_genomes_project 2 24929643 24936592 - MGP_WSBEiJ_P0052449 Tmem8c protein_coding protein_coding MGP_WSBEiJ_T0010315.1 MGP_WSBEiJ_G0008472.1 mouse_genomes_project 2 173610231 173610352 + Gm26469 miRNA miRNA MGP_WSBEiJ_T0007028.1 MGP_WSBEiJ_G0005770.1 mouse_genomes_project 2 6422390 6434601 + 1700061F12Rik lincRNA lincRNA MGP_WSBEiJ_T0055082.1 MGP_WSBEiJ_G0025402.1 mouse_genomes_project 2 92011821 92203721 - MGP_WSBEiJ_P0055082 1110051M20Rik protein_coding protein_coding MGP_WSBEiJ_T0055083.1 MGP_WSBEiJ_G0025402.1 mouse_genomes_project 2 92014070 92203838 - MGP_WSBEiJ_P0055083 1110051M20Rik protein_coding protein_coding MGP_WSBEiJ_T0055084.1 MGP_WSBEiJ_G0025402.1 mouse_genomes_project 2 92020272 92021672 - 1110051M20Rik protein_coding processed_transcript MGP_WSBEiJ_T0055085.1 MGP_WSBEiJ_G0025402.1 mouse_genomes_project 2 92049307 92203742 - 1110051M20Rik protein_coding processed_transcript MGP_WSBEiJ_T0055086.1 MGP_WSBEiJ_G0025402.1 mouse_genomes_project 2 92135496 92203768 - 1110051M20Rik protein_coding processed_transcript MGP_WSBEiJ_T0055087.1 MGP_WSBEiJ_G0025402.1 mouse_genomes_project 2 92175677 92203736 - 1110051M20Rik protein_coding processed_transcript MGP_WSBEiJ_T0055088.1 MGP_WSBEiJ_G0025402.1 mouse_genomes_project 2 92175726 92203803 - 1110051M20Rik protein_coding processed_transcript MGP_WSBEiJ_T0054269.1 MGP_WSBEiJ_G0025094.1 mouse_genomes_project 2 72279805 72290157 + MGP_WSBEiJ_P0054269 Cdca7 protein_coding protein_coding MGP_WSBEiJ_T0054270.1 MGP_WSBEiJ_G0025094.1 mouse_genomes_project 2 72279899 72286144 + MGP_WSBEiJ_P0054270 Cdca7 protein_coding protein_coding MGP_WSBEiJ_T0054271.1 MGP_WSBEiJ_G0025094.1 mouse_genomes_project 2 72280036 72285507 + Cdca7 protein_coding processed_transcript MGP_WSBEiJ_T0054272.1 MGP_WSBEiJ_G0025094.1 mouse_genomes_project 2 72287210 72288390 + Cdca7 protein_coding processed_transcript MGP_WSBEiJ_T0054273.1 MGP_WSBEiJ_G0025094.1 mouse_genomes_project 2 72288753 72289817 + Cdca7 protein_coding processed_transcript MGP_WSBEiJ_T0057012.1 MGP_WSBEiJ_G0025842.1 mouse_genomes_project 2 147740632 147752972 + MGP_WSBEiJ_P0057012 Sec23b protein_coding protein_coding MGP_WSBEiJ_T0057013.1 MGP_WSBEiJ_G0025842.1 mouse_genomes_project 2 147740659 147776282 + MGP_WSBEiJ_P0057013 Sec23b protein_coding protein_coding MGP_WSBEiJ_T0057014.1 MGP_WSBEiJ_G0025842.1 mouse_genomes_project 2 147740684 147744644 + MGP_WSBEiJ_P0057014 Sec23b protein_coding protein_coding MGP_WSBEiJ_T0057015.1 MGP_WSBEiJ_G0025842.1 mouse_genomes_project 2 147740715 147744753 + Sec23b protein_coding processed_transcript MGP_WSBEiJ_T0057016.1 MGP_WSBEiJ_G0025842.1 mouse_genomes_project 2 147740722 147751751 + MGP_WSBEiJ_P0057016 Sec23b protein_coding protein_coding MGP_WSBEiJ_T0057017.1 MGP_WSBEiJ_G0025842.1 mouse_genomes_project 2 147740737 147749593 + MGP_WSBEiJ_P0057017 Sec23b protein_coding protein_coding MGP_WSBEiJ_T0057018.1 MGP_WSBEiJ_G0025842.1 mouse_genomes_project 2 147749839 147776282 + Sec23b protein_coding processed_transcript MGP_WSBEiJ_T0057019.1 MGP_WSBEiJ_G0025842.1 mouse_genomes_project 2 147762017 147765899 + Sec23b protein_coding processed_transcript MGP_WSBEiJ_T0013332.1 MGP_WSBEiJ_G0011462.1 mouse_genomes_project 2 105116842 105117575 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054287.1 MGP_WSBEiJ_G0025099.1 mouse_genomes_project 2 73161671 73168361 - protein_coding processed_transcript MGP_WSBEiJ_T0004055.1 MGP_WSBEiJ_G0003590.1 mouse_genomes_project 2 159293179 159294090 - Gm14257 antisense antisense MGP_WSBEiJ_T0053399.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34001072 34183404 + MGP_WSBEiJ_P0053399 Dab2ip protein_coding protein_coding MGP_WSBEiJ_T0053400.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34027267 34183402 + MGP_WSBEiJ_P0053400 Dab2ip protein_coding protein_coding MGP_WSBEiJ_T0053401.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34066314 34183402 + MGP_WSBEiJ_P0053401 Dab2ip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053402.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34066493 34183402 + MGP_WSBEiJ_P0053402 Dab2ip protein_coding protein_coding MGP_WSBEiJ_T0053403.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34066493 34183406 + MGP_WSBEiJ_P0053403 Dab2ip protein_coding protein_coding MGP_WSBEiJ_T0053404.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34111084 34161058 + Dab2ip protein_coding retained_intron MGP_WSBEiJ_T0053405.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34112853 34183404 + MGP_WSBEiJ_P0053405 Dab2ip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053406.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34112931 34162144 + Dab2ip protein_coding processed_transcript MGP_WSBEiJ_T0053407.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34144216 34183402 + MGP_WSBEiJ_P0053407 Dab2ip protein_coding protein_coding MGP_WSBEiJ_T0053408.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34144555 34181358 + MGP_WSBEiJ_P0053408 Dab2ip protein_coding protein_coding MGP_WSBEiJ_T0053409.1 MGP_WSBEiJ_G0024921.1 mouse_genomes_project 2 34162537 34183404 + MGP_WSBEiJ_P0053409 Dab2ip protein_coding protein_coding MGP_WSBEiJ_T0013063.1 MGP_WSBEiJ_G0011193.1 mouse_genomes_project 2 1071057 1071621 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054686.1 MGP_WSBEiJ_G0025188.1 mouse_genomes_project 2 85904707 85905820 - MGP_WSBEiJ_P0054686 Olfr995 protein_coding protein_coding MGP_WSBEiJ_T0097314.1 MGP_WSBEiJ_G0035989.1 mouse_genomes_project 2 4081099 4083640 - Gm10855 sense_intronic sense_intronic MGP_WSBEiJ_T0055547.1 MGP_WSBEiJ_G0025490.1 mouse_genomes_project 2 110643621 110847629 - MGP_WSBEiJ_P0055547 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055548.1 MGP_WSBEiJ_G0025490.1 mouse_genomes_project 2 110643627 110845278 - protein_coding processed_transcript MGP_WSBEiJ_T0055549.1 MGP_WSBEiJ_G0025490.1 mouse_genomes_project 2 110689962 110847738 - MGP_WSBEiJ_P0055549 protein_coding protein_coding MGP_WSBEiJ_T0055550.1 MGP_WSBEiJ_G0025490.1 mouse_genomes_project 2 110803275 110847716 - protein_coding retained_intron MGP_WSBEiJ_T0055551.1 MGP_WSBEiJ_G0025490.1 mouse_genomes_project 2 110803340 110847692 - protein_coding processed_transcript MGP_WSBEiJ_T0057365.1 MGP_WSBEiJ_G0025946.1 mouse_genomes_project 2 157325419 157360502 + MGP_WSBEiJ_P0057365 Mapre1 protein_coding protein_coding MGP_WSBEiJ_T0057366.1 MGP_WSBEiJ_G0025946.1 mouse_genomes_project 2 157325747 157345124 + Mapre1 protein_coding processed_transcript MGP_WSBEiJ_T0057367.1 MGP_WSBEiJ_G0025946.1 mouse_genomes_project 2 157329540 157343118 + Mapre1 protein_coding processed_transcript MGP_WSBEiJ_T0001019.1 MGP_WSBEiJ_G0000954.1 mouse_genomes_project 2 12217855 12220223 - TEC TEC MGP_WSBEiJ_T0055258.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94731203 94747676 - MGP_WSBEiJ_P0055258 Accs protein_coding protein_coding MGP_WSBEiJ_T0055259.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94733178 94747414 - MGP_WSBEiJ_P0055259 Accs protein_coding protein_coding MGP_WSBEiJ_T0055260.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94733178 94747534 - MGP_WSBEiJ_P0055260 Accs protein_coding protein_coding MGP_WSBEiJ_T0055261.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94733728 94737100 - Accs protein_coding retained_intron MGP_WSBEiJ_T0055262.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94734759 94747678 - Accs protein_coding retained_intron MGP_WSBEiJ_T0055263.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94735751 94745670 - MGP_WSBEiJ_P0055263 Accs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055264.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94736933 94740009 - Accs protein_coding retained_intron MGP_WSBEiJ_T0055265.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94739020 94740122 - Accs protein_coding retained_intron MGP_WSBEiJ_T0055266.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94740309 94747551 - MGP_WSBEiJ_P0055266 Accs protein_coding protein_coding MGP_WSBEiJ_T0055267.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94740538 94747674 - Accs protein_coding retained_intron MGP_WSBEiJ_T0055268.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94740549 94747674 - Accs protein_coding retained_intron MGP_WSBEiJ_T0055269.1 MGP_WSBEiJ_G0025432.1 mouse_genomes_project 2 94742761 94743525 - Accs protein_coding processed_transcript MGP_WSBEiJ_T0056501.1 MGP_WSBEiJ_G0025725.1 mouse_genomes_project 2 130646547 130650525 + Bcl2l11 protein_coding processed_transcript MGP_WSBEiJ_T0056502.1 MGP_WSBEiJ_G0025725.1 mouse_genomes_project 2 130646547 130652005 + MGP_WSBEiJ_P0056502 Bcl2l11 protein_coding protein_coding MGP_WSBEiJ_T0056503.1 MGP_WSBEiJ_G0025725.1 mouse_genomes_project 2 130646547 130681414 + MGP_WSBEiJ_P0056503 Bcl2l11 protein_coding protein_coding MGP_WSBEiJ_T0056504.1 MGP_WSBEiJ_G0025725.1 mouse_genomes_project 2 130646548 130683000 + MGP_WSBEiJ_P0056504 Bcl2l11 protein_coding protein_coding MGP_WSBEiJ_T0056505.1 MGP_WSBEiJ_G0025725.1 mouse_genomes_project 2 130646549 130678899 + MGP_WSBEiJ_P0056505 Bcl2l11 protein_coding protein_coding MGP_WSBEiJ_T0056506.1 MGP_WSBEiJ_G0025725.1 mouse_genomes_project 2 130646559 130681681 + MGP_WSBEiJ_P0056506 Bcl2l11 protein_coding protein_coding MGP_WSBEiJ_T0056507.1 MGP_WSBEiJ_G0025725.1 mouse_genomes_project 2 130648084 130650655 + Bcl2l11 protein_coding processed_transcript MGP_WSBEiJ_T0056508.1 MGP_WSBEiJ_G0025725.1 mouse_genomes_project 2 130648640 130649247 + Bcl2l11 protein_coding processed_transcript MGP_WSBEiJ_T0058516.1 MGP_WSBEiJ_G0026211.1 mouse_genomes_project 2 179007647 179024462 + MGP_WSBEiJ_P0058516 Stx16 protein_coding protein_coding MGP_WSBEiJ_T0058517.1 MGP_WSBEiJ_G0026211.1 mouse_genomes_project 2 179007657 179022763 + MGP_WSBEiJ_P0058517 Stx16 protein_coding protein_coding MGP_WSBEiJ_T0058518.1 MGP_WSBEiJ_G0026211.1 mouse_genomes_project 2 179007661 179025555 + MGP_WSBEiJ_P0058518 Stx16 protein_coding protein_coding MGP_WSBEiJ_T0058519.1 MGP_WSBEiJ_G0026211.1 mouse_genomes_project 2 179008261 179031797 + MGP_WSBEiJ_P0058519 Stx16 protein_coding protein_coding MGP_WSBEiJ_T0058520.1 MGP_WSBEiJ_G0026211.1 mouse_genomes_project 2 179008397 179031796 + MGP_WSBEiJ_P0058520 Stx16 protein_coding protein_coding MGP_WSBEiJ_T0058521.1 MGP_WSBEiJ_G0026211.1 mouse_genomes_project 2 179008405 179028995 + MGP_WSBEiJ_P0058521 Stx16 protein_coding protein_coding MGP_WSBEiJ_T0058455.1 MGP_WSBEiJ_G0026186.1 mouse_genomes_project 2 175253098 175277990 - MGP_WSBEiJ_P0058455 4930470P17Rik protein_coding protein_coding MGP_WSBEiJ_T0054352.1 MGP_WSBEiJ_G0025111.1 mouse_genomes_project 2 74565573 74573041 + Hoxd11 protein_coding processed_transcript MGP_WSBEiJ_T0054353.1 MGP_WSBEiJ_G0025111.1 mouse_genomes_project 2 74568331 74570182 + MGP_WSBEiJ_P0054353 Hoxd11 protein_coding protein_coding MGP_WSBEiJ_T0057863.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162273720 162365314 + MGP_WSBEiJ_P0057863 Ralgapb protein_coding protein_coding MGP_WSBEiJ_T0057864.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162273725 162365314 + MGP_WSBEiJ_P0057864 Ralgapb protein_coding protein_coding MGP_WSBEiJ_T0057865.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162273748 162292694 + Ralgapb protein_coding retained_intron MGP_WSBEiJ_T0057866.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162273751 162306036 + Ralgapb protein_coding retained_intron MGP_WSBEiJ_T0057867.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162273754 162309681 + Ralgapb protein_coding processed_transcript MGP_WSBEiJ_T0057868.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162273823 162363707 + MGP_WSBEiJ_P0057868 Ralgapb protein_coding protein_coding MGP_WSBEiJ_T0057869.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162273974 162285548 + MGP_WSBEiJ_P0057869 Ralgapb protein_coding protein_coding MGP_WSBEiJ_T0057870.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162302945 162365314 + MGP_WSBEiJ_P0057870 Ralgapb protein_coding protein_coding MGP_WSBEiJ_T0057871.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162332055 162340296 + Ralgapb protein_coding retained_intron MGP_WSBEiJ_T0057872.1 MGP_WSBEiJ_G0026043.1 mouse_genomes_project 2 162344604 162351598 + Ralgapb protein_coding processed_transcript MGP_WSBEiJ_T0007150.1 MGP_WSBEiJ_G0005867.1 mouse_genomes_project 2 91974907 91976113 + A330069E16Rik lincRNA lincRNA MGP_WSBEiJ_T0055619.1 MGP_WSBEiJ_G0025524.1 mouse_genomes_project 2 113501642 113502590 + MGP_WSBEiJ_P0055619 Olfr1302 protein_coding protein_coding MGP_WSBEiJ_T0054962.1 MGP_WSBEiJ_G0025388.1 mouse_genomes_project 2 91593350 91597497 - Ndufs3 protein_coding processed_transcript MGP_WSBEiJ_T0054963.1 MGP_WSBEiJ_G0025388.1 mouse_genomes_project 2 91593350 91603980 - MGP_WSBEiJ_P0054963 Ndufs3 protein_coding protein_coding MGP_WSBEiJ_T0054964.1 MGP_WSBEiJ_G0025388.1 mouse_genomes_project 2 91596854 91603795 - Ndufs3 protein_coding processed_transcript MGP_WSBEiJ_T0054965.1 MGP_WSBEiJ_G0025388.1 mouse_genomes_project 2 91602976 91603855 - Ndufs3 protein_coding processed_transcript MGP_WSBEiJ_T0058715.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186276967 186336420 - MGP_WSBEiJ_P0058715 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058716.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186276968 186336628 - MGP_WSBEiJ_P0058716 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058717.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186276975 186336455 - MGP_WSBEiJ_P0058717 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058718.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186276977 186336505 - MGP_WSBEiJ_P0058718 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058719.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186276977 186336505 - MGP_WSBEiJ_P0058719 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058720.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186276977 186336505 - MGP_WSBEiJ_P0058720 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058721.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186276977 186336505 - MGP_WSBEiJ_P0058721 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058722.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186280954 186336589 - MGP_WSBEiJ_P0058722 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058723.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186281867 186316048 - MGP_WSBEiJ_P0058723 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058724.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186282267 186336459 - MGP_WSBEiJ_P0058724 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058725.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186283771 186311127 - MGP_WSBEiJ_P0058725 Kcnq2 protein_coding protein_coding MGP_WSBEiJ_T0058726.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186283821 186296785 - Kcnq2 protein_coding processed_transcript MGP_WSBEiJ_T0058727.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186285950 186302162 - Kcnq2 protein_coding retained_intron MGP_WSBEiJ_T0058728.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186287343 186336505 - Kcnq2 protein_coding retained_intron MGP_WSBEiJ_T0058729.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186297604 186336505 - Kcnq2 protein_coding retained_intron MGP_WSBEiJ_T0058730.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186297829 186336505 - Kcnq2 protein_coding retained_intron MGP_WSBEiJ_T0058731.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186309814 186336505 - Kcnq2 protein_coding processed_transcript MGP_WSBEiJ_T0058732.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186309814 186336571 - Kcnq2 protein_coding retained_intron MGP_WSBEiJ_T0058733.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186309814 186336505 - Kcnq2 protein_coding retained_intron MGP_WSBEiJ_T0058734.1 MGP_WSBEiJ_G0026257.1 mouse_genomes_project 2 186309814 186336505 - Kcnq2 protein_coding retained_intron MGP_WSBEiJ_T0100697.1 MGP_WSBEiJ_G0039155.1 mouse_genomes_project 2 84704358 84705331 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0053929.1 MGP_WSBEiJ_G0025031.1 mouse_genomes_project 2 61091186 61092797 + Tbr1 protein_coding processed_transcript MGP_WSBEiJ_T0053930.1 MGP_WSBEiJ_G0025031.1 mouse_genomes_project 2 61092691 61102350 + MGP_WSBEiJ_P0053930 Tbr1 protein_coding protein_coding MGP_WSBEiJ_T0053931.1 MGP_WSBEiJ_G0025031.1 mouse_genomes_project 2 61094500 61100767 + MGP_WSBEiJ_P0053931 Tbr1 protein_coding protein_coding MGP_WSBEiJ_T0053932.1 MGP_WSBEiJ_G0025031.1 mouse_genomes_project 2 61094511 61100037 + Tbr1 protein_coding processed_transcript MGP_WSBEiJ_T0011302.1 MGP_WSBEiJ_G0009459.1 mouse_genomes_project 2 68052414 68052656 + Gm26321 misc_RNA misc_RNA MGP_WSBEiJ_T0058606.1 MGP_WSBEiJ_G0026233.1 mouse_genomes_project 2 185219015 185225358 - MGP_WSBEiJ_P0058606 Hrh3 protein_coding protein_coding MGP_WSBEiJ_T0058607.1 MGP_WSBEiJ_G0026233.1 mouse_genomes_project 2 185219201 185225021 - MGP_WSBEiJ_P0058607 Hrh3 protein_coding protein_coding MGP_WSBEiJ_T0058608.1 MGP_WSBEiJ_G0026233.1 mouse_genomes_project 2 185220747 185225021 - MGP_WSBEiJ_P0058608 Hrh3 protein_coding protein_coding MGP_WSBEiJ_T0058609.1 MGP_WSBEiJ_G0026233.1 mouse_genomes_project 2 185220747 185225021 - MGP_WSBEiJ_P0058609 Hrh3 protein_coding protein_coding MGP_WSBEiJ_T0058610.1 MGP_WSBEiJ_G0026233.1 mouse_genomes_project 2 185221148 185225044 - MGP_WSBEiJ_P0058610 Hrh3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058611.1 MGP_WSBEiJ_G0026233.1 mouse_genomes_project 2 185221365 185225021 - MGP_WSBEiJ_P0058611 Hrh3 protein_coding protein_coding MGP_WSBEiJ_T0058612.1 MGP_WSBEiJ_G0026233.1 mouse_genomes_project 2 185221365 185225021 - MGP_WSBEiJ_P0058612 Hrh3 protein_coding protein_coding MGP_WSBEiJ_T0058613.1 MGP_WSBEiJ_G0026233.1 mouse_genomes_project 2 185221853 185224205 - Hrh3 protein_coding retained_intron MGP_WSBEiJ_T0051614.1 MGP_WSBEiJ_G0024622.1 mouse_genomes_project 2 10914243 10949928 - MGP_WSBEiJ_P0051614 Trdmt1 protein_coding protein_coding MGP_WSBEiJ_T0051615.1 MGP_WSBEiJ_G0024622.1 mouse_genomes_project 2 10921365 10949910 - Trdmt1 protein_coding processed_transcript MGP_WSBEiJ_T0051616.1 MGP_WSBEiJ_G0024622.1 mouse_genomes_project 2 10927351 10949923 - MGP_WSBEiJ_P0051616 Trdmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053600.1 MGP_WSBEiJ_G0024979.1 mouse_genomes_project 2 42163515 42299100 + MGP_WSBEiJ_P0053600 Kynu protein_coding protein_coding MGP_WSBEiJ_T0053601.1 MGP_WSBEiJ_G0024979.1 mouse_genomes_project 2 42163571 42172196 + Kynu protein_coding processed_transcript MGP_WSBEiJ_T0053602.1 MGP_WSBEiJ_G0024979.1 mouse_genomes_project 2 42163584 42296599 + MGP_WSBEiJ_P0053602 Kynu protein_coding protein_coding MGP_WSBEiJ_T0053603.1 MGP_WSBEiJ_G0024979.1 mouse_genomes_project 2 42163596 42249916 + MGP_WSBEiJ_P0053603 Kynu protein_coding protein_coding MGP_WSBEiJ_T0053604.1 MGP_WSBEiJ_G0024979.1 mouse_genomes_project 2 42209845 42216629 + Kynu protein_coding processed_transcript MGP_WSBEiJ_T0053605.1 MGP_WSBEiJ_G0024979.1 mouse_genomes_project 2 42286228 42299052 + Kynu protein_coding processed_transcript MGP_WSBEiJ_T0058682.1 MGP_WSBEiJ_G0026252.1 mouse_genomes_project 2 186126627 186131612 + Birc7 protein_coding retained_intron MGP_WSBEiJ_T0058683.1 MGP_WSBEiJ_G0026252.1 mouse_genomes_project 2 186126627 186131615 + MGP_WSBEiJ_P0058683 Birc7 protein_coding protein_coding MGP_WSBEiJ_T0054710.1 MGP_WSBEiJ_G0025210.1 mouse_genomes_project 2 86482637 86483648 + MGP_WSBEiJ_P0054710 Olfr1031 protein_coding protein_coding MGP_WSBEiJ_T0013088.1 MGP_WSBEiJ_G0011218.1 mouse_genomes_project 2 12618218 12619314 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013114.1 MGP_WSBEiJ_G0011244.1 mouse_genomes_project 2 20652463 20653000 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017331.1 MGP_WSBEiJ_G0014917.1 mouse_genomes_project 2 177878143 177878596 - Gm20490 processed_transcript processed_transcript MGP_WSBEiJ_T0053332.1 MGP_WSBEiJ_G0024910.1 mouse_genomes_project 2 33288078 33308329 - MGP_WSBEiJ_P0053332 Phf19 protein_coding protein_coding MGP_WSBEiJ_T0053333.1 MGP_WSBEiJ_G0024910.1 mouse_genomes_project 2 33288105 33298485 - Phf19 protein_coding processed_transcript MGP_WSBEiJ_T0053334.1 MGP_WSBEiJ_G0024910.1 mouse_genomes_project 2 33292405 33299240 - Phf19 protein_coding processed_transcript MGP_WSBEiJ_T0053335.1 MGP_WSBEiJ_G0024910.1 mouse_genomes_project 2 33293292 33308379 - Phf19 protein_coding retained_intron MGP_WSBEiJ_T0053336.1 MGP_WSBEiJ_G0024910.1 mouse_genomes_project 2 33301433 33308370 - MGP_WSBEiJ_P0053336 Phf19 protein_coding protein_coding MGP_WSBEiJ_T0058551.1 MGP_WSBEiJ_G0026218.1 mouse_genomes_project 2 179408919 179411953 - MGP_WSBEiJ_P0058551 Atp5e protein_coding protein_coding MGP_WSBEiJ_T0058552.1 MGP_WSBEiJ_G0026218.1 mouse_genomes_project 2 179408922 179411897 - Atp5e protein_coding retained_intron MGP_WSBEiJ_T0058553.1 MGP_WSBEiJ_G0026218.1 mouse_genomes_project 2 179410366 179411937 - Atp5e protein_coding retained_intron MGP_WSBEiJ_T0007037.1 MGP_WSBEiJ_G0005777.1 mouse_genomes_project 2 8710847 8713754 + Gm13291 lincRNA lincRNA MGP_WSBEiJ_T0053858.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59060831 59176765 - MGP_WSBEiJ_P0053858 Baz2b protein_coding unknown_likely_coding MGP_WSBEiJ_T0053859.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59060835 59297615 - MGP_WSBEiJ_P0053859 Baz2b protein_coding protein_coding MGP_WSBEiJ_T0053860.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59060917 59173592 - MGP_WSBEiJ_P0053860 Baz2b protein_coding protein_coding MGP_WSBEiJ_T0053861.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59064661 59074009 - MGP_WSBEiJ_P0053861 Baz2b protein_coding protein_coding MGP_WSBEiJ_T0053862.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59075652 59085394 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053863.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59078372 59082013 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053864.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59086184 59112447 - MGP_WSBEiJ_P0053864 Baz2b protein_coding protein_coding MGP_WSBEiJ_T0053865.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59117695 59125820 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053866.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59143455 59297658 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053867.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59150223 59261437 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053868.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59171966 59297510 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053869.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59248199 59385751 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053870.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59382050 59385713 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053871.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59382517 59385076 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0053872.1 MGP_WSBEiJ_G0025022.1 mouse_genomes_project 2 59382518 59385660 - Baz2b protein_coding processed_transcript MGP_WSBEiJ_T0054700.1 MGP_WSBEiJ_G0025201.1 mouse_genomes_project 2 86283572 86284502 - MGP_WSBEiJ_P0054700 Olfr1016 protein_coding protein_coding MGP_WSBEiJ_T0053450.1 MGP_WSBEiJ_G0024936.1 mouse_genomes_project 2 35177370 35178309 + MGP_WSBEiJ_P0053450 Olfr347 protein_coding protein_coding MGP_WSBEiJ_T0052819.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28481538 28519201 + MGP_WSBEiJ_P0052819 Ptpa protein_coding protein_coding MGP_WSBEiJ_T0052820.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28481630 28519202 + MGP_WSBEiJ_P0052820 Ptpa protein_coding protein_coding MGP_WSBEiJ_T0052821.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28481636 28501858 + MGP_WSBEiJ_P0052821 Ptpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052822.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28481641 28519013 + MGP_WSBEiJ_P0052822 Ptpa protein_coding protein_coding MGP_WSBEiJ_T0052823.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28481695 28519200 + Ptpa protein_coding retained_intron MGP_WSBEiJ_T0052824.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28481801 28496888 + Ptpa protein_coding processed_transcript MGP_WSBEiJ_T0052825.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28496839 28509497 + Ptpa protein_coding retained_intron MGP_WSBEiJ_T0052826.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28509624 28518346 + MGP_WSBEiJ_P0052826 Ptpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052827.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28513248 28518527 + MGP_WSBEiJ_P0052827 Ptpa protein_coding protein_coding MGP_WSBEiJ_T0052828.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28514130 28518202 + MGP_WSBEiJ_P0052828 Ptpa protein_coding protein_coding MGP_WSBEiJ_T0052829.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28514614 28518295 + Ptpa protein_coding processed_transcript MGP_WSBEiJ_T0052830.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28517051 28518470 + Ptpa protein_coding processed_transcript MGP_WSBEiJ_T0052831.1 MGP_WSBEiJ_G0024834.1 mouse_genomes_project 2 28517111 28518172 + Ptpa protein_coding processed_transcript MGP_WSBEiJ_T0058861.1 MGP_WSBEiJ_G0026280.1 mouse_genomes_project 2 186911840 186918871 + Tcea2 protein_coding retained_intron MGP_WSBEiJ_T0058862.1 MGP_WSBEiJ_G0026280.1 mouse_genomes_project 2 186911840 186919600 + MGP_WSBEiJ_P0058862 Tcea2 protein_coding protein_coding MGP_WSBEiJ_T0058863.1 MGP_WSBEiJ_G0026280.1 mouse_genomes_project 2 186912720 186919580 + MGP_WSBEiJ_P0058863 Tcea2 protein_coding protein_coding MGP_WSBEiJ_T0058864.1 MGP_WSBEiJ_G0026280.1 mouse_genomes_project 2 186914415 186919574 + MGP_WSBEiJ_P0058864 Tcea2 protein_coding protein_coding MGP_WSBEiJ_T0058865.1 MGP_WSBEiJ_G0026280.1 mouse_genomes_project 2 186914696 186917817 + Tcea2 protein_coding processed_transcript MGP_WSBEiJ_T0058866.1 MGP_WSBEiJ_G0026280.1 mouse_genomes_project 2 186915105 186919440 + Tcea2 protein_coding retained_intron MGP_WSBEiJ_T0058867.1 MGP_WSBEiJ_G0026280.1 mouse_genomes_project 2 186915131 186918458 + Tcea2 protein_coding retained_intron MGP_WSBEiJ_T0058868.1 MGP_WSBEiJ_G0026280.1 mouse_genomes_project 2 186919036 186919591 + Tcea2 protein_coding processed_transcript MGP_WSBEiJ_T0057811.1 MGP_WSBEiJ_G0026032.1 mouse_genomes_project 2 161376845 161389587 - MGP_WSBEiJ_P0057811 Blcap protein_coding protein_coding MGP_WSBEiJ_T0057812.1 MGP_WSBEiJ_G0026032.1 mouse_genomes_project 2 161376845 161389563 - MGP_WSBEiJ_P0057812 Blcap protein_coding protein_coding MGP_WSBEiJ_T0057813.1 MGP_WSBEiJ_G0026032.1 mouse_genomes_project 2 161378583 161394437 - MGP_WSBEiJ_P0057813 Blcap protein_coding protein_coding MGP_WSBEiJ_T0057814.1 MGP_WSBEiJ_G0026032.1 mouse_genomes_project 2 161378669 161380489 - Blcap protein_coding processed_transcript MGP_WSBEiJ_T0057825.1 MGP_WSBEiJ_G0026032.1 mouse_genomes_project 2 161388788 161389557 - Blcap protein_coding processed_transcript MGP_WSBEiJ_T0057826.1 MGP_WSBEiJ_G0026032.1 mouse_genomes_project 2 161390100 161394437 - Blcap protein_coding processed_transcript MGP_WSBEiJ_T0097031.1 MGP_WSBEiJ_G0035712.1 mouse_genomes_project 2 121664371 121664490 + n-R5s204 rRNA rRNA MGP_WSBEiJ_T0056650.1 MGP_WSBEiJ_G0025762.1 mouse_genomes_project 2 133202241 133203181 + MGP_WSBEiJ_P0056650 Oxt protein_coding protein_coding MGP_WSBEiJ_T0058429.1 MGP_WSBEiJ_G0026179.1 mouse_genomes_project 2 173415018 173480720 - MGP_WSBEiJ_P0058429 Zfp64 protein_coding protein_coding MGP_WSBEiJ_T0058430.1 MGP_WSBEiJ_G0026179.1 mouse_genomes_project 2 173429843 173437432 - MGP_WSBEiJ_P0058430 Zfp64 protein_coding protein_coding MGP_WSBEiJ_T0058431.1 MGP_WSBEiJ_G0026179.1 mouse_genomes_project 2 173449701 173480405 - MGP_WSBEiJ_P0058431 Zfp64 protein_coding protein_coding MGP_WSBEiJ_T0058432.1 MGP_WSBEiJ_G0026179.1 mouse_genomes_project 2 173459131 173480422 - MGP_WSBEiJ_P0058432 Zfp64 protein_coding protein_coding MGP_WSBEiJ_T0058433.1 MGP_WSBEiJ_G0026179.1 mouse_genomes_project 2 173475654 173480399 - Zfp64 protein_coding retained_intron MGP_WSBEiJ_T0054904.1 MGP_WSBEiJ_G0025371.1 mouse_genomes_project 2 90801722 90804897 + MGP_WSBEiJ_P0054904 Olfr1262 protein_coding protein_coding MGP_WSBEiJ_T0054905.1 MGP_WSBEiJ_G0025371.1 mouse_genomes_project 2 90801747 90804702 + MGP_WSBEiJ_P0054905 Olfr1262 protein_coding protein_coding MGP_WSBEiJ_T0054906.1 MGP_WSBEiJ_G0025371.1 mouse_genomes_project 2 90803983 90804897 + MGP_WSBEiJ_P0054906 Olfr1262 protein_coding protein_coding MGP_WSBEiJ_T0007156.1 MGP_WSBEiJ_G0005873.1 mouse_genomes_project 2 93587704 93607339 + Gm13816 lincRNA lincRNA MGP_WSBEiJ_T0013074.1 MGP_WSBEiJ_G0011204.1 mouse_genomes_project 2 6824415 6824923 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013374.1 MGP_WSBEiJ_G0011504.1 mouse_genomes_project 2 121936564 121936879 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003823.1 MGP_WSBEiJ_G0003420.1 mouse_genomes_project 2 9669027 9683726 + E030013I19Rik antisense antisense MGP_WSBEiJ_T0003824.1 MGP_WSBEiJ_G0003420.1 mouse_genomes_project 2 9669398 9684741 + E030013I19Rik antisense antisense MGP_WSBEiJ_T0004043.1 MGP_WSBEiJ_G0003579.1 mouse_genomes_project 2 155331621 155333267 - Rspo4os antisense antisense MGP_WSBEiJ_T0001040.1 MGP_WSBEiJ_G0000975.1 mouse_genomes_project 2 36544178 36547103 - TEC TEC MGP_WSBEiJ_T0057248.1 MGP_WSBEiJ_G0025909.1 mouse_genomes_project 2 155906891 155935894 + MGP_WSBEiJ_P0057248 6820408C15Rik protein_coding protein_coding MGP_WSBEiJ_T0057249.1 MGP_WSBEiJ_G0025909.1 mouse_genomes_project 2 155918626 155935893 + MGP_WSBEiJ_P0057249 6820408C15Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057250.1 MGP_WSBEiJ_G0025909.1 mouse_genomes_project 2 155918653 155931202 + MGP_WSBEiJ_P0057250 6820408C15Rik protein_coding protein_coding MGP_WSBEiJ_T0097208.1 MGP_WSBEiJ_G0035889.1 mouse_genomes_project 2 176027901 176028165 - Gm26489 scaRNA scaRNA MGP_WSBEiJ_T0001042.1 MGP_WSBEiJ_G0000977.1 mouse_genomes_project 2 36999850 37002444 - TEC TEC MGP_WSBEiJ_T0098133.1 MGP_WSBEiJ_G0036796.1 mouse_genomes_project 2 155908511 155908574 + Gm27343 snRNA snRNA MGP_WSBEiJ_T0017183.1 MGP_WSBEiJ_G0014839.1 mouse_genomes_project 2 51394500 51401367 + A430018G15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017184.1 MGP_WSBEiJ_G0014839.1 mouse_genomes_project 2 51394500 51404357 + A430018G15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0058843.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186802124 186812830 - MGP_WSBEiJ_P0058843 Zfp512b protein_coding protein_coding MGP_WSBEiJ_T0058844.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186802126 186810946 - MGP_WSBEiJ_P0058844 Zfp512b protein_coding protein_coding MGP_WSBEiJ_T0058845.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186804612 186806426 - Zfp512b protein_coding retained_intron MGP_WSBEiJ_T0058846.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186805200 186806332 - MGP_WSBEiJ_P0058846 Zfp512b protein_coding protein_coding MGP_WSBEiJ_T0058847.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186805206 186806384 - MGP_WSBEiJ_P0058847 Zfp512b protein_coding protein_coding MGP_WSBEiJ_T0058848.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186806743 186807672 - Zfp512b protein_coding retained_intron MGP_WSBEiJ_T0058849.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186807139 186808766 - MGP_WSBEiJ_P0058849 Zfp512b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058850.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186808092 186809313 - Zfp512b protein_coding processed_transcript MGP_WSBEiJ_T0058851.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186810049 186812785 - Zfp512b protein_coding processed_transcript MGP_WSBEiJ_T0058852.1 MGP_WSBEiJ_G0026276.1 mouse_genomes_project 2 186810548 186812830 - MGP_WSBEiJ_P0058852 Zfp512b protein_coding protein_coding MGP_WSBEiJ_T0051739.1 MGP_WSBEiJ_G0024644.1 mouse_genomes_project 2 16280837 16286763 + Spag6 protein_coding processed_transcript MGP_WSBEiJ_T0051740.1 MGP_WSBEiJ_G0024644.1 mouse_genomes_project 2 16280857 16286916 + Spag6 protein_coding processed_transcript MGP_WSBEiJ_T0051741.1 MGP_WSBEiJ_G0024644.1 mouse_genomes_project 2 16286901 16342586 + MGP_WSBEiJ_P0051741 Spag6 protein_coding protein_coding MGP_WSBEiJ_T0051742.1 MGP_WSBEiJ_G0024644.1 mouse_genomes_project 2 16286962 16322271 + MGP_WSBEiJ_P0051742 Spag6 protein_coding protein_coding MGP_WSBEiJ_T0052969.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30175967 30200436 + MGP_WSBEiJ_P0052969 Aif1l protein_coding protein_coding MGP_WSBEiJ_T0052970.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30176102 30196761 + MGP_WSBEiJ_P0052970 Aif1l protein_coding protein_coding MGP_WSBEiJ_T0052971.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30176162 30198226 + MGP_WSBEiJ_P0052971 Aif1l protein_coding protein_coding MGP_WSBEiJ_T0052972.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30176291 30196764 + Aif1l protein_coding retained_intron MGP_WSBEiJ_T0052973.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30176345 30198332 + Aif1l protein_coding retained_intron MGP_WSBEiJ_T0052974.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30186183 30198018 + Aif1l protein_coding processed_transcript MGP_WSBEiJ_T0052975.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30187164 30196760 + Aif1l protein_coding processed_transcript MGP_WSBEiJ_T0052976.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30187754 30197942 + Aif1l protein_coding retained_intron MGP_WSBEiJ_T0052977.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30189086 30197989 + Aif1l protein_coding processed_transcript MGP_WSBEiJ_T0052978.1 MGP_WSBEiJ_G0024858.1 mouse_genomes_project 2 30196333 30198149 + Aif1l protein_coding retained_intron MGP_WSBEiJ_T0098098.1 MGP_WSBEiJ_G0036761.1 mouse_genomes_project 2 37531243 37531350 + Gm26127 snRNA snRNA MGP_WSBEiJ_T0004076.1 MGP_WSBEiJ_G0003607.1 mouse_genomes_project 2 168290115 168313689 + A730032A03Rik antisense antisense MGP_WSBEiJ_T0004077.1 MGP_WSBEiJ_G0003607.1 mouse_genomes_project 2 168308454 168313689 + A730032A03Rik antisense antisense MGP_WSBEiJ_T0013468.1 MGP_WSBEiJ_G0011598.1 mouse_genomes_project 2 160082744 160083440 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057163.1 MGP_WSBEiJ_G0025886.1 mouse_genomes_project 2 154329997 154352356 + Gins1 protein_coding processed_transcript MGP_WSBEiJ_T0057164.1 MGP_WSBEiJ_G0025886.1 mouse_genomes_project 2 154335064 154357684 + MGP_WSBEiJ_P0057164 Gins1 protein_coding protein_coding MGP_WSBEiJ_T0057165.1 MGP_WSBEiJ_G0025886.1 mouse_genomes_project 2 154335087 154352550 + Gins1 protein_coding processed_transcript MGP_WSBEiJ_T0057166.1 MGP_WSBEiJ_G0025886.1 mouse_genomes_project 2 154335189 154357677 + MGP_WSBEiJ_P0057166 Gins1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0057167.1 MGP_WSBEiJ_G0025886.1 mouse_genomes_project 2 154339584 154353992 + Gins1 protein_coding processed_transcript MGP_WSBEiJ_T0004105.1 MGP_WSBEiJ_G0003628.1 mouse_genomes_project 2 179218550 179234729 - Nespas antisense antisense MGP_WSBEiJ_T0004106.1 MGP_WSBEiJ_G0003628.1 mouse_genomes_project 2 179219507 179234682 - Nespas antisense antisense MGP_WSBEiJ_T0004107.1 MGP_WSBEiJ_G0003628.1 mouse_genomes_project 2 179221667 179222750 - Nespas antisense antisense MGP_WSBEiJ_T0055446.1 MGP_WSBEiJ_G0025468.1 mouse_genomes_project 2 105487138 105776285 - MGP_WSBEiJ_P0055446 D430041D05Rik protein_coding protein_coding MGP_WSBEiJ_T0055447.1 MGP_WSBEiJ_G0025468.1 mouse_genomes_project 2 105490058 105606328 - MGP_WSBEiJ_P0055447 D430041D05Rik protein_coding protein_coding MGP_WSBEiJ_T0055448.1 MGP_WSBEiJ_G0025468.1 mouse_genomes_project 2 105491080 105576279 - D430041D05Rik protein_coding retained_intron MGP_WSBEiJ_T0055449.1 MGP_WSBEiJ_G0025468.1 mouse_genomes_project 2 105496210 105503497 - D430041D05Rik protein_coding retained_intron MGP_WSBEiJ_T0055450.1 MGP_WSBEiJ_G0025468.1 mouse_genomes_project 2 105529656 105587912 - D430041D05Rik protein_coding retained_intron MGP_WSBEiJ_T0055451.1 MGP_WSBEiJ_G0025468.1 mouse_genomes_project 2 105553405 105605494 - D430041D05Rik protein_coding retained_intron MGP_WSBEiJ_T0055452.1 MGP_WSBEiJ_G0025468.1 mouse_genomes_project 2 105602632 105775943 - MGP_WSBEiJ_P0055452 D430041D05Rik protein_coding protein_coding MGP_WSBEiJ_T0055453.1 MGP_WSBEiJ_G0025468.1 mouse_genomes_project 2 105602925 105775944 - MGP_WSBEiJ_P0055453 D430041D05Rik protein_coding protein_coding MGP_WSBEiJ_T0054131.1 MGP_WSBEiJ_G0025071.1 mouse_genomes_project 2 69499289 69509508 + MGP_WSBEiJ_P0054131 Ssb protein_coding protein_coding MGP_WSBEiJ_T0054132.1 MGP_WSBEiJ_G0025071.1 mouse_genomes_project 2 69499289 69509567 + MGP_WSBEiJ_P0054132 Ssb protein_coding protein_coding MGP_WSBEiJ_T0054133.1 MGP_WSBEiJ_G0025071.1 mouse_genomes_project 2 69499350 69509232 + MGP_WSBEiJ_P0054133 Ssb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054134.1 MGP_WSBEiJ_G0025071.1 mouse_genomes_project 2 69499413 69505274 + MGP_WSBEiJ_P0054134 Ssb protein_coding protein_coding MGP_WSBEiJ_T0054135.1 MGP_WSBEiJ_G0025071.1 mouse_genomes_project 2 69501014 69506871 + Ssb protein_coding processed_transcript MGP_WSBEiJ_T0054136.1 MGP_WSBEiJ_G0025071.1 mouse_genomes_project 2 69506499 69509232 + MGP_WSBEiJ_P0054136 Ssb protein_coding protein_coding MGP_WSBEiJ_T0054002.1 MGP_WSBEiJ_G0025043.1 mouse_genomes_project 2 64866636 64989015 - MGP_WSBEiJ_P0054002 protein_coding protein_coding MGP_WSBEiJ_T0054003.1 MGP_WSBEiJ_G0025043.1 mouse_genomes_project 2 64867777 64989151 - MGP_WSBEiJ_P0054003 protein_coding protein_coding MGP_WSBEiJ_T0054004.1 MGP_WSBEiJ_G0025043.1 mouse_genomes_project 2 64907220 64914140 - protein_coding processed_transcript MGP_WSBEiJ_T0054005.1 MGP_WSBEiJ_G0025043.1 mouse_genomes_project 2 64944313 64950457 - MGP_WSBEiJ_P0054005 protein_coding protein_coding MGP_WSBEiJ_T0098101.1 MGP_WSBEiJ_G0036764.1 mouse_genomes_project 2 52289014 52289120 - Gm25898 snRNA snRNA MGP_WSBEiJ_T0055810.1 MGP_WSBEiJ_G0025581.1 mouse_genomes_project 2 121043945 121066621 + MGP_WSBEiJ_P0055810 Casc5 protein_coding protein_coding MGP_WSBEiJ_T0055811.1 MGP_WSBEiJ_G0025581.1 mouse_genomes_project 2 121043945 121103391 + MGP_WSBEiJ_P0055811 Casc5 protein_coding protein_coding MGP_WSBEiJ_T0055812.1 MGP_WSBEiJ_G0025581.1 mouse_genomes_project 2 121043973 121063319 + MGP_WSBEiJ_P0055812 Casc5 protein_coding protein_coding MGP_WSBEiJ_T0055813.1 MGP_WSBEiJ_G0025581.1 mouse_genomes_project 2 121043976 121070268 + MGP_WSBEiJ_P0055813 Casc5 protein_coding protein_coding MGP_WSBEiJ_T0055814.1 MGP_WSBEiJ_G0025581.1 mouse_genomes_project 2 121054065 121104767 + MGP_WSBEiJ_P0055814 Casc5 protein_coding protein_coding MGP_WSBEiJ_T0051964.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786268 22794793 + MGP_WSBEiJ_P0051964 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051965.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786286 22792475 + MGP_WSBEiJ_P0051965 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051966.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786292 22794792 + MGP_WSBEiJ_P0051966 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051967.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786297 22794793 + MGP_WSBEiJ_P0051967 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051968.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786316 22788791 + Nsmf protein_coding retained_intron MGP_WSBEiJ_T0051969.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786320 22787010 + Nsmf protein_coding retained_intron MGP_WSBEiJ_T0051970.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786326 22794793 + MGP_WSBEiJ_P0051970 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051971.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786326 22794793 + MGP_WSBEiJ_P0051971 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051972.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786338 22790969 + MGP_WSBEiJ_P0051972 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051973.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786348 22794793 + MGP_WSBEiJ_P0051973 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051974.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786369 22794793 + MGP_WSBEiJ_P0051974 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051975.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786381 22794793 + MGP_WSBEiJ_P0051975 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051976.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22786381 22794540 + MGP_WSBEiJ_P0051976 Nsmf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051977.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22787793 22789259 + Nsmf protein_coding retained_intron MGP_WSBEiJ_T0051978.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22789058 22794793 + MGP_WSBEiJ_P0051978 Nsmf protein_coding protein_coding MGP_WSBEiJ_T0051979.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22789487 22791572 + Nsmf protein_coding retained_intron MGP_WSBEiJ_T0051980.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22792048 22793020 + Nsmf protein_coding retained_intron MGP_WSBEiJ_T0051981.1 MGP_WSBEiJ_G0024684.1 mouse_genomes_project 2 22792741 22793621 + Nsmf protein_coding retained_intron MGP_WSBEiJ_T0052885.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29137134 29181876 + MGP_WSBEiJ_P0052885 Usp20 protein_coding protein_coding MGP_WSBEiJ_T0052886.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29137189 29139090 + Usp20 protein_coding retained_intron MGP_WSBEiJ_T0052887.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29137218 29165888 + MGP_WSBEiJ_P0052887 Usp20 protein_coding protein_coding MGP_WSBEiJ_T0052888.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29137252 29161239 + MGP_WSBEiJ_P0052888 Usp20 protein_coding protein_coding MGP_WSBEiJ_T0052889.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29137284 29158399 + MGP_WSBEiJ_P0052889 Usp20 protein_coding protein_coding MGP_WSBEiJ_T0052890.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29151864 29160908 + MGP_WSBEiJ_P0052890 Usp20 protein_coding protein_coding MGP_WSBEiJ_T0052891.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29151965 29161239 + MGP_WSBEiJ_P0052891 Usp20 protein_coding protein_coding MGP_WSBEiJ_T0052892.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29152251 29181872 + MGP_WSBEiJ_P0052892 Usp20 protein_coding protein_coding MGP_WSBEiJ_T0052893.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29152257 29164689 + Usp20 protein_coding processed_transcript MGP_WSBEiJ_T0052894.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29157165 29164718 + MGP_WSBEiJ_P0052894 Usp20 protein_coding protein_coding MGP_WSBEiJ_T0052895.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29160850 29162016 + Usp20 protein_coding retained_intron MGP_WSBEiJ_T0052896.1 MGP_WSBEiJ_G0024845.1 mouse_genomes_project 2 29178108 29179671 + Usp20 protein_coding retained_intron MGP_WSBEiJ_T0001025.1 MGP_WSBEiJ_G0000960.1 mouse_genomes_project 2 21152142 21153706 + TEC TEC MGP_WSBEiJ_T0057647.1 MGP_WSBEiJ_G0026006.1 mouse_genomes_project 2 159814555 159836880 - MGP_WSBEiJ_P0057647 Rbm12 protein_coding protein_coding MGP_WSBEiJ_T0057648.1 MGP_WSBEiJ_G0026006.1 mouse_genomes_project 2 159814555 159836880 - MGP_WSBEiJ_P0057648 Rbm12 protein_coding protein_coding MGP_WSBEiJ_T0057649.1 MGP_WSBEiJ_G0026006.1 mouse_genomes_project 2 159820112 159836840 - MGP_WSBEiJ_P0057649 Rbm12 protein_coding protein_coding MGP_WSBEiJ_T0057650.1 MGP_WSBEiJ_G0026006.1 mouse_genomes_project 2 159820548 159836902 - MGP_WSBEiJ_P0057650 Rbm12 protein_coding protein_coding MGP_WSBEiJ_T0057651.1 MGP_WSBEiJ_G0026006.1 mouse_genomes_project 2 159820577 159836885 - MGP_WSBEiJ_P0057651 Rbm12 protein_coding protein_coding MGP_WSBEiJ_T0054762.1 MGP_WSBEiJ_G0025260.1 mouse_genomes_project 2 87720999 87721938 - MGP_WSBEiJ_P0054762 Olfr259 protein_coding protein_coding MGP_WSBEiJ_T0058794.1 MGP_WSBEiJ_G0026269.1 mouse_genomes_project 2 186589461 186592537 + MGP_WSBEiJ_P0058794 Lime1 protein_coding protein_coding MGP_WSBEiJ_T0058795.1 MGP_WSBEiJ_G0026269.1 mouse_genomes_project 2 186590618 186593050 + MGP_WSBEiJ_P0058795 Lime1 protein_coding protein_coding MGP_WSBEiJ_T0058796.1 MGP_WSBEiJ_G0026269.1 mouse_genomes_project 2 186590741 186592976 + Lime1 protein_coding retained_intron MGP_WSBEiJ_T0058797.1 MGP_WSBEiJ_G0026269.1 mouse_genomes_project 2 186590741 186592376 + Lime1 protein_coding retained_intron MGP_WSBEiJ_T0058798.1 MGP_WSBEiJ_G0026269.1 mouse_genomes_project 2 186590741 186593045 + MGP_WSBEiJ_P0058798 Lime1 protein_coding protein_coding MGP_WSBEiJ_T0058800.1 MGP_WSBEiJ_G0026269.1 mouse_genomes_project 2 186591293 186593050 + MGP_WSBEiJ_P0058800 Lime1 protein_coding protein_coding MGP_WSBEiJ_T0058801.1 MGP_WSBEiJ_G0026269.1 mouse_genomes_project 2 186591907 186592735 + Lime1 protein_coding retained_intron MGP_WSBEiJ_T0054376.1 MGP_WSBEiJ_G0025122.1 mouse_genomes_project 2 75787585 75893234 + MGP_WSBEiJ_P0054376 Agps protein_coding protein_coding MGP_WSBEiJ_T0054377.1 MGP_WSBEiJ_G0025122.1 mouse_genomes_project 2 75787597 75854087 + MGP_WSBEiJ_P0054377 Agps protein_coding protein_coding MGP_WSBEiJ_T0054378.1 MGP_WSBEiJ_G0025122.1 mouse_genomes_project 2 75787913 75887931 + MGP_WSBEiJ_P0054378 Agps protein_coding protein_coding MGP_WSBEiJ_T0054379.1 MGP_WSBEiJ_G0025122.1 mouse_genomes_project 2 75825877 75835980 + MGP_WSBEiJ_P0054379 Agps protein_coding protein_coding MGP_WSBEiJ_T0054380.1 MGP_WSBEiJ_G0025122.1 mouse_genomes_project 2 75831420 75850217 + Agps protein_coding processed_transcript MGP_WSBEiJ_T0054381.1 MGP_WSBEiJ_G0025122.1 mouse_genomes_project 2 75852552 75888001 + MGP_WSBEiJ_P0054381 Agps protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054382.1 MGP_WSBEiJ_G0025122.1 mouse_genomes_project 2 75869092 75871592 + Agps protein_coding retained_intron MGP_WSBEiJ_T0056648.1 MGP_WSBEiJ_G0025761.1 mouse_genomes_project 2 133190066 133191709 + Mrps26 protein_coding retained_intron MGP_WSBEiJ_T0056649.1 MGP_WSBEiJ_G0025761.1 mouse_genomes_project 2 133190066 133194794 + MGP_WSBEiJ_P0056649 Mrps26 protein_coding protein_coding MGP_WSBEiJ_T0003958.1 MGP_WSBEiJ_G0003522.1 mouse_genomes_project 2 104001730 104010584 - Gm13872 antisense antisense MGP_WSBEiJ_T0003959.1 MGP_WSBEiJ_G0003522.1 mouse_genomes_project 2 104007475 104010571 - Gm13872 antisense antisense MGP_WSBEiJ_T0003960.1 MGP_WSBEiJ_G0003522.1 mouse_genomes_project 2 104008462 104010585 - Gm13872 antisense antisense MGP_WSBEiJ_T0056991.1 MGP_WSBEiJ_G0025838.1 mouse_genomes_project 2 147546570 147551315 + MGP_WSBEiJ_P0056991 Pet117 protein_coding protein_coding MGP_WSBEiJ_T0017150.1 MGP_WSBEiJ_G0014820.1 mouse_genomes_project 2 22117196 22173309 + Gm13415 processed_transcript antisense MGP_WSBEiJ_T0017151.1 MGP_WSBEiJ_G0014820.1 mouse_genomes_project 2 22119613 22142145 + Gm13415 processed_transcript antisense MGP_WSBEiJ_T0017152.1 MGP_WSBEiJ_G0014820.1 mouse_genomes_project 2 22119627 22122043 + Gm13415 processed_transcript retained_intron MGP_WSBEiJ_T0010296.1 MGP_WSBEiJ_G0008453.1 mouse_genomes_project 2 149083020 149083208 + Gm25026 miRNA miRNA MGP_WSBEiJ_T0007049.1 MGP_WSBEiJ_G0005786.1 mouse_genomes_project 2 22857413 22880279 - Gm13387 lincRNA lincRNA MGP_WSBEiJ_T0007050.1 MGP_WSBEiJ_G0005786.1 mouse_genomes_project 2 22876674 22880279 - Gm13387 lincRNA lincRNA MGP_WSBEiJ_T0007051.1 MGP_WSBEiJ_G0005786.1 mouse_genomes_project 2 22878700 22880206 - Gm13387 lincRNA lincRNA MGP_WSBEiJ_T0013296.1 MGP_WSBEiJ_G0011426.1 mouse_genomes_project 2 88252962 88253686 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013228.1 MGP_WSBEiJ_G0011358.1 mouse_genomes_project 2 66338345 66340488 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010233.1 MGP_WSBEiJ_G0008390.1 mouse_genomes_project 2 30282356 30282419 + Mir7674 miRNA miRNA MGP_WSBEiJ_T0004052.1 MGP_WSBEiJ_G0003588.1 mouse_genomes_project 2 159289902 159292466 + Gssos2 antisense antisense MGP_WSBEiJ_T0004053.1 MGP_WSBEiJ_G0003588.1 mouse_genomes_project 2 159291522 159292452 + Gssos2 antisense antisense MGP_WSBEiJ_T0054817.1 MGP_WSBEiJ_G0025304.1 mouse_genomes_project 2 88876739 88877783 + MGP_WSBEiJ_P0054817 Olfr1173 protein_coding protein_coding MGP_WSBEiJ_T0055246.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94560637 94727382 - MGP_WSBEiJ_P0055246 Ext2 protein_coding protein_coding MGP_WSBEiJ_T0055247.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94596374 94727401 - MGP_WSBEiJ_P0055247 Ext2 protein_coding protein_coding MGP_WSBEiJ_T0055248.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94596856 94605846 - Ext2 protein_coding retained_intron MGP_WSBEiJ_T0055249.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94596870 94727378 - MGP_WSBEiJ_P0055249 Ext2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055250.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94603692 94608054 - MGP_WSBEiJ_P0055250 Ext2 protein_coding protein_coding MGP_WSBEiJ_T0055251.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94604275 94605246 - MGP_WSBEiJ_P0055251 Ext2 protein_coding protein_coding MGP_WSBEiJ_T0055252.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94616681 94727382 - Ext2 protein_coding processed_transcript MGP_WSBEiJ_T0055253.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94665944 94701177 - Ext2 protein_coding retained_intron MGP_WSBEiJ_T0055254.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94711301 94727398 - MGP_WSBEiJ_P0055254 Ext2 protein_coding protein_coding MGP_WSBEiJ_T0055255.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94718316 94727378 - Ext2 protein_coding retained_intron MGP_WSBEiJ_T0055256.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94718740 94727381 - MGP_WSBEiJ_P0055256 Ext2 protein_coding protein_coding MGP_WSBEiJ_T0055257.1 MGP_WSBEiJ_G0025431.1 mouse_genomes_project 2 94719125 94727386 - Ext2 protein_coding processed_transcript MGP_WSBEiJ_T0013155.1 MGP_WSBEiJ_G0011285.1 mouse_genomes_project 2 37659732 37660458 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054720.1 MGP_WSBEiJ_G0025220.1 mouse_genomes_project 2 86702784 86703732 - MGP_WSBEiJ_P0054720 Olfr1045 protein_coding protein_coding MGP_WSBEiJ_T0100687.1 MGP_WSBEiJ_G0039145.1 mouse_genomes_project 2 34767683 34768622 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010224.1 MGP_WSBEiJ_G0008381.1 mouse_genomes_project 2 25330802 25330884 - Mir7578 miRNA miRNA MGP_WSBEiJ_T0013320.1 MGP_WSBEiJ_G0011450.1 mouse_genomes_project 2 100609005 100609633 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004034.1 MGP_WSBEiJ_G0003571.1 mouse_genomes_project 2 147510763 147511945 + 1700108N11Rik antisense antisense MGP_WSBEiJ_T0057097.1 MGP_WSBEiJ_G0025861.1 mouse_genomes_project 2 151728720 151732443 - MGP_WSBEiJ_P0057097 Thbd protein_coding protein_coding MGP_WSBEiJ_T0056316.1 MGP_WSBEiJ_G0025678.1 mouse_genomes_project 2 127500251 127525188 - MGP_WSBEiJ_P0056316 Gm9833 protein_coding protein_coding MGP_WSBEiJ_T0007062.1 MGP_WSBEiJ_G0005794.1 mouse_genomes_project 2 26251155 26261429 - Gm13373 lincRNA lincRNA MGP_WSBEiJ_T0051397.1 MGP_WSBEiJ_G0024591.1 mouse_genomes_project 2 2963941 2964796 - Gm13199 protein_coding processed_transcript MGP_WSBEiJ_T0051398.1 MGP_WSBEiJ_G0024591.1 mouse_genomes_project 2 2963942 2964785 - MGP_WSBEiJ_P0051398 Gm13199 protein_coding protein_coding MGP_WSBEiJ_T0003950.1 MGP_WSBEiJ_G0003516.1 mouse_genomes_project 2 85616729 85618435 + Gm13716 antisense antisense MGP_WSBEiJ_T0100727.1 MGP_WSBEiJ_G0039185.1 mouse_genomes_project 2 89057048 89057984 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0054903.1 MGP_WSBEiJ_G0025370.1 mouse_genomes_project 2 90791615 90794805 + MGP_WSBEiJ_P0054903 protein_coding protein_coding MGP_WSBEiJ_T0013137.1 MGP_WSBEiJ_G0011267.1 mouse_genomes_project 2 31637832 31638615 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001041.1 MGP_WSBEiJ_G0000976.1 mouse_genomes_project 2 36964465 36969323 + TEC TEC MGP_WSBEiJ_T0055702.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117707667 117912699 - MGP_WSBEiJ_P0055702 Meis2 protein_coding protein_coding MGP_WSBEiJ_T0055703.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117707667 117913496 - MGP_WSBEiJ_P0055703 Meis2 protein_coding protein_coding MGP_WSBEiJ_T0055704.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117707667 117912699 - MGP_WSBEiJ_P0055704 Meis2 protein_coding protein_coding MGP_WSBEiJ_T0055705.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117707667 117913496 - MGP_WSBEiJ_P0055705 Meis2 protein_coding protein_coding MGP_WSBEiJ_T0055706.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117707747 117912373 - MGP_WSBEiJ_P0055706 Meis2 protein_coding protein_coding MGP_WSBEiJ_T0055707.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117707902 117912166 - MGP_WSBEiJ_P0055707 Meis2 protein_coding protein_coding MGP_WSBEiJ_T0055708.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117708505 117717546 - Meis2 protein_coding processed_transcript MGP_WSBEiJ_T0055709.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117708828 117713461 - Meis2 protein_coding retained_intron MGP_WSBEiJ_T0055710.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117708874 117888965 - Meis2 protein_coding processed_transcript MGP_WSBEiJ_T0055711.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117708919 117717457 - Meis2 protein_coding processed_transcript MGP_WSBEiJ_T0055712.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117709060 117717546 - Meis2 protein_coding processed_transcript MGP_WSBEiJ_T0055713.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117709469 117717565 - Meis2 protein_coding retained_intron MGP_WSBEiJ_T0055714.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117711473 117717549 - Meis2 protein_coding processed_transcript MGP_WSBEiJ_T0055715.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117767251 117896600 - Meis2 protein_coding processed_transcript MGP_WSBEiJ_T0055716.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117841504 117910176 - Meis2 protein_coding retained_intron MGP_WSBEiJ_T0055717.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117884773 117896132 - Meis2 protein_coding retained_intron MGP_WSBEiJ_T0055718.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117896003 117911236 - Meis2 protein_coding processed_transcript MGP_WSBEiJ_T0055719.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117896003 117910346 - Meis2 protein_coding processed_transcript MGP_WSBEiJ_T0055720.1 MGP_WSBEiJ_G0025557.1 mouse_genomes_project 2 117896026 117906659 - Meis2 protein_coding retained_intron MGP_WSBEiJ_T0013280.1 MGP_WSBEiJ_G0011410.1 mouse_genomes_project 2 84404155 84404526 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013431.1 MGP_WSBEiJ_G0011561.1 mouse_genomes_project 2 149097319 149097934 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054714.1 MGP_WSBEiJ_G0025214.1 mouse_genomes_project 2 86632917 86633877 - MGP_WSBEiJ_P0054714 Olfr1039 protein_coding protein_coding MGP_WSBEiJ_T0007256.1 MGP_WSBEiJ_G0005952.1 mouse_genomes_project 2 160186022 160189749 - Gm14224 lincRNA lincRNA MGP_WSBEiJ_T0017301.1 MGP_WSBEiJ_G0014904.1 mouse_genomes_project 2 160598559 160618700 - 5430405H02Rik processed_transcript antisense MGP_WSBEiJ_T0017302.1 MGP_WSBEiJ_G0014904.1 mouse_genomes_project 2 160606637 160618631 - 5430405H02Rik processed_transcript antisense MGP_WSBEiJ_T0017303.1 MGP_WSBEiJ_G0014904.1 mouse_genomes_project 2 160606637 160618682 - 5430405H02Rik processed_transcript antisense MGP_WSBEiJ_T0013461.1 MGP_WSBEiJ_G0011591.1 mouse_genomes_project 2 159151425 159151740 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003996.1 MGP_WSBEiJ_G0003548.1 mouse_genomes_project 2 131731709 131755200 - AI847159 antisense antisense MGP_WSBEiJ_T0003997.1 MGP_WSBEiJ_G0003548.1 mouse_genomes_project 2 131752715 131755200 - AI847159 antisense antisense MGP_WSBEiJ_T0003998.1 MGP_WSBEiJ_G0003548.1 mouse_genomes_project 2 131752719 131753109 - AI847159 antisense antisense MGP_WSBEiJ_T0003999.1 MGP_WSBEiJ_G0003548.1 mouse_genomes_project 2 131752763 131755235 - AI847159 antisense antisense MGP_WSBEiJ_T0052323.1 MGP_WSBEiJ_G0024753.1 mouse_genomes_project 2 24233339 24241123 + MGP_WSBEiJ_P0052323 Pmpca protein_coding protein_coding MGP_WSBEiJ_T0052324.1 MGP_WSBEiJ_G0024753.1 mouse_genomes_project 2 24233348 24237942 + MGP_WSBEiJ_P0052324 Pmpca protein_coding protein_coding MGP_WSBEiJ_T0052325.1 MGP_WSBEiJ_G0024753.1 mouse_genomes_project 2 24233354 24234296 + Pmpca protein_coding processed_transcript MGP_WSBEiJ_T0052326.1 MGP_WSBEiJ_G0024753.1 mouse_genomes_project 2 24233354 24234203 + Pmpca protein_coding processed_transcript MGP_WSBEiJ_T0052327.1 MGP_WSBEiJ_G0024753.1 mouse_genomes_project 2 24233356 24235967 + Pmpca protein_coding processed_transcript MGP_WSBEiJ_T0052328.1 MGP_WSBEiJ_G0024753.1 mouse_genomes_project 2 24234927 24236399 + Pmpca protein_coding processed_transcript MGP_WSBEiJ_T0010240.1 MGP_WSBEiJ_G0008397.1 mouse_genomes_project 2 30989256 30989338 - Mir2861 miRNA miRNA MGP_WSBEiJ_T0007319.1 MGP_WSBEiJ_G0006006.1 mouse_genomes_project 2 179830039 179840269 + Gm14616 lincRNA lincRNA MGP_WSBEiJ_T0013192.1 MGP_WSBEiJ_G0011322.1 mouse_genomes_project 2 52410129 52411101 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051525.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041274 9071675 + MGP_WSBEiJ_P0051525 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051526.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041313 9070983 + Il15ra protein_coding processed_transcript MGP_WSBEiJ_T0051527.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041333 9071320 + MGP_WSBEiJ_P0051527 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051528.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041353 9071326 + MGP_WSBEiJ_P0051528 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051529.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041359 9055720 + Il15ra protein_coding retained_intron MGP_WSBEiJ_T0051530.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041371 9071326 + Il15ra protein_coding processed_transcript MGP_WSBEiJ_T0051531.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041427 9071340 + MGP_WSBEiJ_P0051531 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051532.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041536 9070759 + Il15ra protein_coding processed_transcript MGP_WSBEiJ_T0051533.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041696 9057260 + MGP_WSBEiJ_P0051533 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051534.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041743 9057547 + Il15ra protein_coding retained_intron MGP_WSBEiJ_T0051535.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041761 9071344 + MGP_WSBEiJ_P0051535 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051536.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041794 9071675 + MGP_WSBEiJ_P0051536 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051537.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041794 9070759 + MGP_WSBEiJ_P0051537 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051538.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041795 9070759 + MGP_WSBEiJ_P0051538 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051539.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9041832 9070607 + MGP_WSBEiJ_P0051539 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051540.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9055480 9057441 + Il15ra protein_coding retained_intron MGP_WSBEiJ_T0051541.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9055584 9070775 + MGP_WSBEiJ_P0051541 Il15ra protein_coding protein_coding MGP_WSBEiJ_T0051542.1 MGP_WSBEiJ_G0024613.1 mouse_genomes_project 2 9060372 9071326 + Il15ra protein_coding retained_intron MGP_WSBEiJ_T0010318.1 MGP_WSBEiJ_G0008475.1 mouse_genomes_project 2 179182326 179182394 + Gm27591 miRNA miRNA MGP_WSBEiJ_T0052214.1 MGP_WSBEiJ_G0024730.1 mouse_genomes_project 2 23450367 23455198 + MGP_WSBEiJ_P0052214 Lcn6 protein_coding protein_coding MGP_WSBEiJ_T0052215.1 MGP_WSBEiJ_G0024730.1 mouse_genomes_project 2 23452848 23455195 + MGP_WSBEiJ_P0052215 Lcn6 protein_coding protein_coding MGP_WSBEiJ_T0052216.1 MGP_WSBEiJ_G0024730.1 mouse_genomes_project 2 23453541 23455191 + MGP_WSBEiJ_P0052216 Lcn6 protein_coding protein_coding MGP_WSBEiJ_T0052217.1 MGP_WSBEiJ_G0024730.1 mouse_genomes_project 2 23453693 23455191 + Lcn6 protein_coding processed_transcript MGP_WSBEiJ_T0055540.1 MGP_WSBEiJ_G0025487.1 mouse_genomes_project 2 108435283 108446931 - MGP_WSBEiJ_P0055540 Arl14ep protein_coding protein_coding MGP_WSBEiJ_T0055541.1 MGP_WSBEiJ_G0025487.1 mouse_genomes_project 2 108437203 108443153 - MGP_WSBEiJ_P0055541 Arl14ep protein_coding protein_coding MGP_WSBEiJ_T0055542.1 MGP_WSBEiJ_G0025487.1 mouse_genomes_project 2 108437965 108442038 - Arl14ep protein_coding retained_intron MGP_WSBEiJ_T0055543.1 MGP_WSBEiJ_G0025487.1 mouse_genomes_project 2 108440162 108446904 - Arl14ep protein_coding retained_intron MGP_WSBEiJ_T0054872.1 MGP_WSBEiJ_G0025352.1 mouse_genomes_project 2 90300061 90301006 - MGP_WSBEiJ_P0054872 Olfr1241 protein_coding protein_coding MGP_WSBEiJ_T0055443.1 MGP_WSBEiJ_G0025465.1 mouse_genomes_project 2 105395444 105426313 + MGP_WSBEiJ_P0055443 protein_coding protein_coding MGP_WSBEiJ_T0058618.1 MGP_WSBEiJ_G0026235.1 mouse_genomes_project 2 185294035 185294879 + protein_coding retained_intron MGP_WSBEiJ_T0058619.1 MGP_WSBEiJ_G0026235.1 mouse_genomes_project 2 185294046 185301055 + protein_coding retained_intron MGP_WSBEiJ_T0058620.1 MGP_WSBEiJ_G0026235.1 mouse_genomes_project 2 185294046 185295721 + protein_coding retained_intron MGP_WSBEiJ_T0058621.1 MGP_WSBEiJ_G0026235.1 mouse_genomes_project 2 185294054 185300906 + protein_coding retained_intron MGP_WSBEiJ_T0058622.1 MGP_WSBEiJ_G0026235.1 mouse_genomes_project 2 185294593 185301055 + protein_coding retained_intron MGP_WSBEiJ_T0007056.1 MGP_WSBEiJ_G0005790.1 mouse_genomes_project 2 23972313 23973311 + 1810012K08Rik lincRNA lincRNA MGP_WSBEiJ_T0056836.1 MGP_WSBEiJ_G0025799.1 mouse_genomes_project 2 135510195 135524771 + MGP_WSBEiJ_P0056836 Chgb protein_coding protein_coding MGP_WSBEiJ_T0055608.1 MGP_WSBEiJ_G0025513.1 mouse_genomes_project 2 113019989 113020758 + MGP_WSBEiJ_P0055608 protein_coding protein_coding MGP_WSBEiJ_T0100690.1 MGP_WSBEiJ_G0039148.1 mouse_genomes_project 2 34993344 34993647 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000999.1 MGP_WSBEiJ_G0000934.1 mouse_genomes_project 2 8688772 8690978 - TEC TEC MGP_WSBEiJ_T0004084.1 MGP_WSBEiJ_G0003611.1 mouse_genomes_project 2 169374901 169379459 + Gm14397 antisense antisense MGP_WSBEiJ_T0053391.1 MGP_WSBEiJ_G0024920.1 mouse_genomes_project 2 33809661 33841864 - MGP_WSBEiJ_P0053391 Ggta1 protein_coding protein_coding MGP_WSBEiJ_T0053392.1 MGP_WSBEiJ_G0024920.1 mouse_genomes_project 2 33809661 33887513 - MGP_WSBEiJ_P0053392 Ggta1 protein_coding protein_coding MGP_WSBEiJ_T0053393.1 MGP_WSBEiJ_G0024920.1 mouse_genomes_project 2 33809665 33887696 - MGP_WSBEiJ_P0053393 Ggta1 protein_coding protein_coding MGP_WSBEiJ_T0053394.1 MGP_WSBEiJ_G0024920.1 mouse_genomes_project 2 33809665 33887496 - MGP_WSBEiJ_P0053394 Ggta1 protein_coding protein_coding MGP_WSBEiJ_T0053395.1 MGP_WSBEiJ_G0024920.1 mouse_genomes_project 2 33811591 33832542 - MGP_WSBEiJ_P0053395 Ggta1 protein_coding protein_coding MGP_WSBEiJ_T0053396.1 MGP_WSBEiJ_G0024920.1 mouse_genomes_project 2 33811591 33832542 - MGP_WSBEiJ_P0053396 Ggta1 protein_coding protein_coding MGP_WSBEiJ_T0053397.1 MGP_WSBEiJ_G0024920.1 mouse_genomes_project 2 33817214 33851352 - MGP_WSBEiJ_P0053397 Ggta1 protein_coding protein_coding MGP_WSBEiJ_T0053398.1 MGP_WSBEiJ_G0024920.1 mouse_genomes_project 2 33832543 33856314 - Ggta1 protein_coding processed_transcript MGP_WSBEiJ_T0051847.1 MGP_WSBEiJ_G0024663.1 mouse_genomes_project 2 20756806 20798342 - MGP_WSBEiJ_P0051847 Mastl protein_coding protein_coding MGP_WSBEiJ_T0051848.1 MGP_WSBEiJ_G0024663.1 mouse_genomes_project 2 20779032 20798215 - Mastl protein_coding processed_transcript MGP_WSBEiJ_T0053305.1 MGP_WSBEiJ_G0024906.1 mouse_genomes_project 2 33162240 33182265 - MGP_WSBEiJ_P0053305 Rabepk protein_coding protein_coding MGP_WSBEiJ_T0053306.1 MGP_WSBEiJ_G0024906.1 mouse_genomes_project 2 33162260 33182415 - MGP_WSBEiJ_P0053306 Rabepk protein_coding protein_coding MGP_WSBEiJ_T0053307.1 MGP_WSBEiJ_G0024906.1 mouse_genomes_project 2 33162451 33177958 - MGP_WSBEiJ_P0053307 Rabepk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053308.1 MGP_WSBEiJ_G0024906.1 mouse_genomes_project 2 33167603 33182511 - MGP_WSBEiJ_P0053308 Rabepk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053309.1 MGP_WSBEiJ_G0024906.1 mouse_genomes_project 2 33167995 33182548 - MGP_WSBEiJ_P0053309 Rabepk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053310.1 MGP_WSBEiJ_G0024906.1 mouse_genomes_project 2 33168467 33182401 - Rabepk protein_coding retained_intron MGP_WSBEiJ_T0001058.1 MGP_WSBEiJ_G0000993.1 mouse_genomes_project 2 96757724 96778799 + TEC TEC MGP_WSBEiJ_T0058572.1 MGP_WSBEiJ_G0026224.1 mouse_genomes_project 2 183486477 183489751 - MGP_WSBEiJ_P0058572 Ppp1r3d protein_coding protein_coding MGP_WSBEiJ_T0097027.1 MGP_WSBEiJ_G0035708.1 mouse_genomes_project 2 105643468 105643581 + Gm25554 rRNA rRNA MGP_WSBEiJ_T0052519.1 MGP_WSBEiJ_G0024790.1 mouse_genomes_project 2 26451438 26451843 + MGP_WSBEiJ_P0052519 protein_coding protein_coding MGP_WSBEiJ_T0055600.1 MGP_WSBEiJ_G0025505.1 mouse_genomes_project 2 112890610 112891549 + MGP_WSBEiJ_P0055600 Olfr1276 protein_coding protein_coding MGP_WSBEiJ_T0058826.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789187 186790427 - MGP_WSBEiJ_P0058826 Uckl1 protein_coding protein_coding MGP_WSBEiJ_T0058827.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789190 186789836 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0058828.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789201 186801994 - MGP_WSBEiJ_P0058828 Uckl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058829.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789203 186789920 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0058830.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789269 186792573 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0058831.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789349 186801990 - MGP_WSBEiJ_P0058831 Uckl1 protein_coding protein_coding MGP_WSBEiJ_T0058832.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789652 186793160 - MGP_WSBEiJ_P0058832 Uckl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058833.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789691 186793160 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0058834.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789802 186791407 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0058835.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186789888 186793169 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0058836.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186790044 186794508 - Uckl1 protein_coding processed_transcript MGP_WSBEiJ_T0058837.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186790400 186792191 - Uckl1 protein_coding processed_transcript MGP_WSBEiJ_T0058838.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186792357 186794532 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0058839.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186793285 186804915 - MGP_WSBEiJ_P0058839 Uckl1 protein_coding protein_coding MGP_WSBEiJ_T0058840.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186793330 186794866 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0058841.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186793341 186798978 - MGP_WSBEiJ_P0058841 Uckl1 protein_coding protein_coding MGP_WSBEiJ_T0058842.1 MGP_WSBEiJ_G0026275.1 mouse_genomes_project 2 186794316 186802000 - Uckl1 protein_coding retained_intron MGP_WSBEiJ_T0010242.1 MGP_WSBEiJ_G0008399.1 mouse_genomes_project 2 31678134 31678187 - Gm25998 miRNA miRNA MGP_WSBEiJ_T0053266.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32520000 32733604 - MGP_WSBEiJ_P0053266 Pbx3 protein_coding protein_coding MGP_WSBEiJ_T0053267.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32520265 32733693 - MGP_WSBEiJ_P0053267 Pbx3 protein_coding protein_coding MGP_WSBEiJ_T0053268.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32521413 32645342 - Pbx3 protein_coding processed_transcript MGP_WSBEiJ_T0053269.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32521421 32733670 - MGP_WSBEiJ_P0053269 Pbx3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053270.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32521421 32733670 - MGP_WSBEiJ_P0053270 Pbx3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053271.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32525399 32732602 - MGP_WSBEiJ_P0053271 Pbx3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053272.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32565314 32734734 - MGP_WSBEiJ_P0053272 Pbx3 protein_coding protein_coding MGP_WSBEiJ_T0053273.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32576323 32733009 - MGP_WSBEiJ_P0053273 Pbx3 protein_coding protein_coding MGP_WSBEiJ_T0053274.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32576450 32732906 - MGP_WSBEiJ_P0053274 Pbx3 protein_coding protein_coding MGP_WSBEiJ_T0053275.1 MGP_WSBEiJ_G0024902.1 mouse_genomes_project 2 32729867 32733548 - Pbx3 protein_coding retained_intron MGP_WSBEiJ_T0013240.1 MGP_WSBEiJ_G0011370.1 mouse_genomes_project 2 71536928 71537458 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056916.1 MGP_WSBEiJ_G0025818.1 mouse_genomes_project 2 142463721 142614683 + MGP_WSBEiJ_P0056916 Sptlc3 protein_coding protein_coding MGP_WSBEiJ_T0056917.1 MGP_WSBEiJ_G0025818.1 mouse_genomes_project 2 142463728 142615301 + MGP_WSBEiJ_P0056917 Sptlc3 protein_coding protein_coding MGP_WSBEiJ_T0013317.1 MGP_WSBEiJ_G0011447.1 mouse_genomes_project 2 97984465 97985866 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054374.1 MGP_WSBEiJ_G0025121.1 mouse_genomes_project 2 75621823 75650866 - MGP_WSBEiJ_P0054374 Nfe2l2 protein_coding protein_coding MGP_WSBEiJ_T0054375.1 MGP_WSBEiJ_G0025121.1 mouse_genomes_project 2 75637090 75650714 - Nfe2l2 protein_coding processed_transcript MGP_WSBEiJ_T0055832.1 MGP_WSBEiJ_G0025586.1 mouse_genomes_project 2 121173491 121176561 + MGP_WSBEiJ_P0055832 Gm14137 protein_coding protein_coding MGP_WSBEiJ_T0056965.1 MGP_WSBEiJ_G0025832.1 mouse_genomes_project 2 147112030 147116894 - Rrbp1 protein_coding processed_transcript MGP_WSBEiJ_T0056966.1 MGP_WSBEiJ_G0025832.1 mouse_genomes_project 2 147112030 147176104 - MGP_WSBEiJ_P0056966 Rrbp1 protein_coding protein_coding MGP_WSBEiJ_T0056967.1 MGP_WSBEiJ_G0025832.1 mouse_genomes_project 2 147112763 147114372 - Rrbp1 protein_coding processed_transcript MGP_WSBEiJ_T0056968.1 MGP_WSBEiJ_G0025832.1 mouse_genomes_project 2 147115127 147119795 - Rrbp1 protein_coding processed_transcript MGP_WSBEiJ_T0056969.1 MGP_WSBEiJ_G0025832.1 mouse_genomes_project 2 147120995 147122258 - Rrbp1 protein_coding processed_transcript MGP_WSBEiJ_T0056970.1 MGP_WSBEiJ_G0025832.1 mouse_genomes_project 2 147124933 147131821 - Rrbp1 protein_coding processed_transcript MGP_WSBEiJ_T0056971.1 MGP_WSBEiJ_G0025832.1 mouse_genomes_project 2 147129066 147147365 - Rrbp1 protein_coding processed_transcript MGP_WSBEiJ_T0056972.1 MGP_WSBEiJ_G0025832.1 mouse_genomes_project 2 147150052 147176104 - MGP_WSBEiJ_P0056972 Rrbp1 protein_coding protein_coding MGP_WSBEiJ_T0099395.1 MGP_WSBEiJ_G0038058.1 mouse_genomes_project 2 154488635 154488764 + Gm22187 snoRNA snoRNA MGP_WSBEiJ_T0004090.1 MGP_WSBEiJ_G0003617.1 mouse_genomes_project 2 172448972 172449950 + Gm14236 antisense antisense MGP_WSBEiJ_T0099370.1 MGP_WSBEiJ_G0038033.1 mouse_genomes_project 2 98195700 98195829 + Gm22313 snoRNA snoRNA MGP_WSBEiJ_T0051399.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2972756 3000544 - MGP_WSBEiJ_P0051399 Sec61a2 protein_coding protein_coding MGP_WSBEiJ_T0051400.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2972798 3000446 - MGP_WSBEiJ_P0051400 Sec61a2 protein_coding protein_coding MGP_WSBEiJ_T0051401.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2973364 2978214 - MGP_WSBEiJ_P0051401 Sec61a2 protein_coding protein_coding MGP_WSBEiJ_T0051402.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2973762 2976565 - Sec61a2 protein_coding processed_transcript MGP_WSBEiJ_T0051403.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2975179 2976059 - Sec61a2 protein_coding processed_transcript MGP_WSBEiJ_T0051404.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2975566 2978778 - Sec61a2 protein_coding processed_transcript MGP_WSBEiJ_T0051405.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2978159 2979744 - Sec61a2 protein_coding processed_transcript MGP_WSBEiJ_T0051406.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2978227 2980125 - Sec61a2 protein_coding processed_transcript MGP_WSBEiJ_T0051407.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2979608 3000431 - MGP_WSBEiJ_P0051407 Sec61a2 protein_coding protein_coding MGP_WSBEiJ_T0051408.1 MGP_WSBEiJ_G0024592.1 mouse_genomes_project 2 2984143 3000446 - Sec61a2 protein_coding retained_intron MGP_WSBEiJ_T0056586.1 MGP_WSBEiJ_G0025748.1 mouse_genomes_project 2 132718101 132764800 + Tgm6 protein_coding processed_transcript MGP_WSBEiJ_T0056587.1 MGP_WSBEiJ_G0025748.1 mouse_genomes_project 2 132730798 132764800 + Tgm6 protein_coding processed_transcript MGP_WSBEiJ_T0056588.1 MGP_WSBEiJ_G0025748.1 mouse_genomes_project 2 132730798 132764800 + MGP_WSBEiJ_P0056588 Tgm6 protein_coding protein_coding MGP_WSBEiJ_T0054711.1 MGP_WSBEiJ_G0025211.1 mouse_genomes_project 2 86555872 86556576 + MGP_WSBEiJ_P0054711 Olfr1032 protein_coding protein_coding MGP_WSBEiJ_T0004017.1 MGP_WSBEiJ_G0003559.1 mouse_genomes_project 2 135413545 135417452 - Gm14097 antisense antisense MGP_WSBEiJ_T0057702.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160152345 160281995 + MGP_WSBEiJ_P0057702 Epb41l1 protein_coding protein_coding MGP_WSBEiJ_T0057703.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160152484 160281995 + MGP_WSBEiJ_P0057703 Epb41l1 protein_coding protein_coding MGP_WSBEiJ_T0057704.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160152488 160240081 + Epb41l1 protein_coding processed_transcript MGP_WSBEiJ_T0057705.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160152516 160261584 + MGP_WSBEiJ_P0057705 Epb41l1 protein_coding protein_coding MGP_WSBEiJ_T0057706.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160152533 160281995 + MGP_WSBEiJ_P0057706 Epb41l1 protein_coding protein_coding MGP_WSBEiJ_T0057707.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160152544 160281995 + MGP_WSBEiJ_P0057707 Epb41l1 protein_coding protein_coding MGP_WSBEiJ_T0057708.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160211795 160237323 + Epb41l1 protein_coding processed_transcript MGP_WSBEiJ_T0057709.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160212082 160281995 + MGP_WSBEiJ_P0057709 Epb41l1 protein_coding protein_coding MGP_WSBEiJ_T0057710.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160212128 160281995 + MGP_WSBEiJ_P0057710 Epb41l1 protein_coding protein_coding MGP_WSBEiJ_T0057711.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160231581 160281995 + MGP_WSBEiJ_P0057711 Epb41l1 protein_coding protein_coding MGP_WSBEiJ_T0057712.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160231596 160281990 + MGP_WSBEiJ_P0057712 Epb41l1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0057713.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160244051 160252706 + Epb41l1 protein_coding processed_transcript MGP_WSBEiJ_T0057714.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160272347 160278801 + Epb41l1 protein_coding retained_intron MGP_WSBEiJ_T0057715.1 MGP_WSBEiJ_G0026013.1 mouse_genomes_project 2 160276188 160279141 + Epb41l1 protein_coding processed_transcript MGP_WSBEiJ_T0055890.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121807782 121833506 - MGP_WSBEiJ_P0055890 Rpap1 protein_coding protein_coding MGP_WSBEiJ_T0055891.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121808436 121833530 - MGP_WSBEiJ_P0055891 Rpap1 protein_coding protein_coding MGP_WSBEiJ_T0055892.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121808437 121833539 - MGP_WSBEiJ_P0055892 Rpap1 protein_coding protein_coding MGP_WSBEiJ_T0055893.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121808440 121833502 - MGP_WSBEiJ_P0055893 Rpap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055894.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121808443 121833522 - MGP_WSBEiJ_P0055894 Rpap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055895.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121811115 121833521 - Rpap1 protein_coding retained_intron MGP_WSBEiJ_T0055896.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121823108 121833516 - Rpap1 protein_coding retained_intron MGP_WSBEiJ_T0055897.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121823322 121826472 - Rpap1 protein_coding retained_intron MGP_WSBEiJ_T0055898.1 MGP_WSBEiJ_G0025603.1 mouse_genomes_project 2 121823661 121833531 - Rpap1 protein_coding processed_transcript MGP_WSBEiJ_T0013478.1 MGP_WSBEiJ_G0011608.1 mouse_genomes_project 2 162270379 162270690 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054807.1 MGP_WSBEiJ_G0025295.1 mouse_genomes_project 2 88630217 88631156 - MGP_WSBEiJ_P0054807 Olfr1157 protein_coding protein_coding MGP_WSBEiJ_T0054801.1 MGP_WSBEiJ_G0025289.1 mouse_genomes_project 2 88555830 88556867 + MGP_WSBEiJ_P0054801 Olfr1151 protein_coding protein_coding MGP_WSBEiJ_T0013512.1 MGP_WSBEiJ_G0011642.1 mouse_genomes_project 2 187130634 187130933 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007027.1 MGP_WSBEiJ_G0005769.1 mouse_genomes_project 2 4870385 4932442 - Gm13211 lincRNA lincRNA MGP_WSBEiJ_T0058098.1 MGP_WSBEiJ_G0026110.1 mouse_genomes_project 2 168775395 168785635 + MGP_WSBEiJ_P0058098 Wfdc6a protein_coding protein_coding MGP_WSBEiJ_T0055558.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111244219 111298109 + MGP_WSBEiJ_P0055558 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055559.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111245416 111298109 + MGP_WSBEiJ_P0055559 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055560.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111245416 111298109 + MGP_WSBEiJ_P0055560 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055561.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111245416 111298109 + MGP_WSBEiJ_P0055561 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055562.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111246551 111298109 + MGP_WSBEiJ_P0055562 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055563.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111261955 111298109 + MGP_WSBEiJ_P0055563 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055564.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111263145 111298109 + MGP_WSBEiJ_P0055564 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055565.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111263681 111298109 + MGP_WSBEiJ_P0055565 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055566.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111264527 111298109 + MGP_WSBEiJ_P0055566 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055567.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111264587 111298109 + MGP_WSBEiJ_P0055567 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0055568.1 MGP_WSBEiJ_G0025492.1 mouse_genomes_project 2 111280549 111298109 + MGP_WSBEiJ_P0055568 Bdnf protein_coding protein_coding MGP_WSBEiJ_T0001000.1 MGP_WSBEiJ_G0000935.1 mouse_genomes_project 2 8709630 8710752 - TEC TEC MGP_WSBEiJ_T0053995.1 MGP_WSBEiJ_G0025042.1 mouse_genomes_project 2 64707596 64758064 - MGP_WSBEiJ_P0053995 Slc38a11 protein_coding protein_coding MGP_WSBEiJ_T0053996.1 MGP_WSBEiJ_G0025042.1 mouse_genomes_project 2 64707651 64758520 - MGP_WSBEiJ_P0053996 Slc38a11 protein_coding protein_coding MGP_WSBEiJ_T0053997.1 MGP_WSBEiJ_G0025042.1 mouse_genomes_project 2 64714831 64758635 - MGP_WSBEiJ_P0053997 Slc38a11 protein_coding protein_coding MGP_WSBEiJ_T0053998.1 MGP_WSBEiJ_G0025042.1 mouse_genomes_project 2 64744078 64758635 - Slc38a11 protein_coding processed_transcript MGP_WSBEiJ_T0053999.1 MGP_WSBEiJ_G0025042.1 mouse_genomes_project 2 64744645 64758601 - MGP_WSBEiJ_P0053999 Slc38a11 protein_coding protein_coding MGP_WSBEiJ_T0054000.1 MGP_WSBEiJ_G0025042.1 mouse_genomes_project 2 64747491 64758524 - Slc38a11 protein_coding processed_transcript MGP_WSBEiJ_T0054001.1 MGP_WSBEiJ_G0025042.1 mouse_genomes_project 2 64749400 64758631 - Slc38a11 protein_coding processed_transcript MGP_WSBEiJ_T0051553.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9114589 9115573 + MGP_WSBEiJ_P0051553 Ankrd16 protein_coding protein_coding MGP_WSBEiJ_T0051554.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9115204 9126928 + MGP_WSBEiJ_P0051554 Ankrd16 protein_coding protein_coding MGP_WSBEiJ_T0051555.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9115237 9126932 + Ankrd16 protein_coding retained_intron MGP_WSBEiJ_T0051556.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9115240 9126906 + Ankrd16 protein_coding retained_intron MGP_WSBEiJ_T0051557.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9115277 9126928 + MGP_WSBEiJ_P0051557 Ankrd16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051558.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9115285 9117983 + Ankrd16 protein_coding retained_intron MGP_WSBEiJ_T0051559.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9116599 9126371 + MGP_WSBEiJ_P0051559 Ankrd16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051560.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9120007 9126923 + Ankrd16 protein_coding retained_intron MGP_WSBEiJ_T0051561.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9120027 9126517 + Ankrd16 protein_coding retained_intron MGP_WSBEiJ_T0051562.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9120923 9126904 + Ankrd16 protein_coding retained_intron MGP_WSBEiJ_T0051563.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9121011 9126899 + MGP_WSBEiJ_P0051563 Ankrd16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051564.1 MGP_WSBEiJ_G0024615.1 mouse_genomes_project 2 9122878 9126725 + Ankrd16 protein_coding retained_intron MGP_WSBEiJ_T0058651.1 MGP_WSBEiJ_G0026244.1 mouse_genomes_project 2 185748810 185755376 + MGP_WSBEiJ_P0058651 Ogfr protein_coding protein_coding MGP_WSBEiJ_T0058652.1 MGP_WSBEiJ_G0026244.1 mouse_genomes_project 2 185749027 185753415 + Ogfr protein_coding retained_intron MGP_WSBEiJ_T0057904.1 MGP_WSBEiJ_G0026052.1 mouse_genomes_project 2 164327628 164330967 - MGP_WSBEiJ_P0057904 Mafb protein_coding protein_coding MGP_WSBEiJ_T0056543.1 MGP_WSBEiJ_G0025737.1 mouse_genomes_project 2 131671867 131697693 + MGP_WSBEiJ_P0056543 Polr1b protein_coding protein_coding MGP_WSBEiJ_T0056544.1 MGP_WSBEiJ_G0025737.1 mouse_genomes_project 2 131671899 131691878 + MGP_WSBEiJ_P0056544 Polr1b protein_coding protein_coding MGP_WSBEiJ_T0056545.1 MGP_WSBEiJ_G0025737.1 mouse_genomes_project 2 131686782 131689600 + Polr1b protein_coding processed_transcript MGP_WSBEiJ_T0056546.1 MGP_WSBEiJ_G0025737.1 mouse_genomes_project 2 131689764 131694234 + Polr1b protein_coding processed_transcript MGP_WSBEiJ_T0056547.1 MGP_WSBEiJ_G0025737.1 mouse_genomes_project 2 131692820 131694934 + Polr1b protein_coding processed_transcript MGP_WSBEiJ_T0007017.1 MGP_WSBEiJ_G0005761.1 mouse_genomes_project 2 922206 925528 - Gm13191 lincRNA lincRNA MGP_WSBEiJ_T0058383.1 MGP_WSBEiJ_G0026170.1 mouse_genomes_project 2 172526368 172547731 + MGP_WSBEiJ_P0058383 Pard6b protein_coding protein_coding MGP_WSBEiJ_T0013295.1 MGP_WSBEiJ_G0011425.1 mouse_genomes_project 2 88249889 88250739 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001027.1 MGP_WSBEiJ_G0000962.1 mouse_genomes_project 2 22589075 22590909 - TEC TEC MGP_WSBEiJ_T0052210.1 MGP_WSBEiJ_G0024729.1 mouse_genomes_project 2 23433011 23436556 + MGP_WSBEiJ_P0052210 Lcn5 protein_coding protein_coding MGP_WSBEiJ_T0052211.1 MGP_WSBEiJ_G0024729.1 mouse_genomes_project 2 23433014 23436700 + MGP_WSBEiJ_P0052211 Lcn5 protein_coding protein_coding MGP_WSBEiJ_T0052212.1 MGP_WSBEiJ_G0024729.1 mouse_genomes_project 2 23433014 23437003 + MGP_WSBEiJ_P0052212 Lcn5 protein_coding protein_coding MGP_WSBEiJ_T0052213.1 MGP_WSBEiJ_G0024729.1 mouse_genomes_project 2 23435981 23436696 + Lcn5 protein_coding processed_transcript MGP_WSBEiJ_T0052069.1 MGP_WSBEiJ_G0024705.1 mouse_genomes_project 2 23077717 23089481 + MGP_WSBEiJ_P0052069 Man1b1 protein_coding protein_coding MGP_WSBEiJ_T0052070.1 MGP_WSBEiJ_G0024705.1 mouse_genomes_project 2 23078108 23098300 + MGP_WSBEiJ_P0052070 Man1b1 protein_coding protein_coding MGP_WSBEiJ_T0052071.1 MGP_WSBEiJ_G0024705.1 mouse_genomes_project 2 23078141 23090749 + Man1b1 protein_coding processed_transcript MGP_WSBEiJ_T0052072.1 MGP_WSBEiJ_G0024705.1 mouse_genomes_project 2 23078152 23083548 + Man1b1 protein_coding processed_transcript MGP_WSBEiJ_T0052073.1 MGP_WSBEiJ_G0024705.1 mouse_genomes_project 2 23083491 23091463 + Man1b1 protein_coding processed_transcript MGP_WSBEiJ_T0052074.1 MGP_WSBEiJ_G0024705.1 mouse_genomes_project 2 23091197 23091901 + Man1b1 protein_coding processed_transcript MGP_WSBEiJ_T0052222.1 MGP_WSBEiJ_G0024735.1 mouse_genomes_project 2 23547852 23550383 + MGP_WSBEiJ_P0052222 Lcn3 protein_coding protein_coding MGP_WSBEiJ_T0055410.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105064853 105102608 - MGP_WSBEiJ_P0055410 Caprin1 protein_coding protein_coding MGP_WSBEiJ_T0055411.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105066930 105102063 - MGP_WSBEiJ_P0055411 Caprin1 protein_coding protein_coding MGP_WSBEiJ_T0055412.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105069838 105075513 - MGP_WSBEiJ_P0055412 Caprin1 protein_coding protein_coding MGP_WSBEiJ_T0055413.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105070543 105074525 - MGP_WSBEiJ_P0055413 Caprin1 protein_coding protein_coding MGP_WSBEiJ_T0055414.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105071181 105075416 - Caprin1 protein_coding retained_intron MGP_WSBEiJ_T0055415.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105074442 105077004 - Caprin1 protein_coding retained_intron MGP_WSBEiJ_T0055416.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105075480 105076444 - Caprin1 protein_coding processed_transcript MGP_WSBEiJ_T0055417.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105075729 105082090 - MGP_WSBEiJ_P0055417 Caprin1 protein_coding protein_coding MGP_WSBEiJ_T0055418.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105075732 105078739 - Caprin1 protein_coding retained_intron MGP_WSBEiJ_T0055419.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105076203 105078385 - Caprin1 protein_coding processed_transcript MGP_WSBEiJ_T0055420.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105080693 105101892 - Caprin1 protein_coding processed_transcript MGP_WSBEiJ_T0055421.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105082245 105101503 - Caprin1 protein_coding processed_transcript MGP_WSBEiJ_T0055422.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105085894 105101932 - Caprin1 protein_coding retained_intron MGP_WSBEiJ_T0055423.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105086292 105101827 - Caprin1 protein_coding processed_transcript MGP_WSBEiJ_T0055424.1 MGP_WSBEiJ_G0025460.1 mouse_genomes_project 2 105101410 105102558 - Caprin1 protein_coding retained_intron MGP_WSBEiJ_T0004038.1 MGP_WSBEiJ_G0003575.1 mouse_genomes_project 2 150446038 150447014 + 6430503K07Rik antisense antisense MGP_WSBEiJ_T0010241.1 MGP_WSBEiJ_G0008398.1 mouse_genomes_project 2 30989349 30989422 - Mir3960 miRNA miRNA MGP_WSBEiJ_T0055344.1 MGP_WSBEiJ_G0025449.1 mouse_genomes_project 2 103695985 103699139 - MGP_WSBEiJ_P0055344 protein_coding protein_coding MGP_WSBEiJ_T0013105.1 MGP_WSBEiJ_G0011235.1 mouse_genomes_project 2 17130117 17130345 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007209.1 MGP_WSBEiJ_G0005912.1 mouse_genomes_project 2 122615970 122622564 + Gm26899 lincRNA lincRNA MGP_WSBEiJ_T0052385.1 MGP_WSBEiJ_G0024763.1 mouse_genomes_project 2 24754546 24758484 - Surf6 protein_coding processed_transcript MGP_WSBEiJ_T0052386.1 MGP_WSBEiJ_G0024763.1 mouse_genomes_project 2 24754843 24758046 - Surf6 protein_coding processed_transcript MGP_WSBEiJ_T0052387.1 MGP_WSBEiJ_G0024763.1 mouse_genomes_project 2 24754907 24766244 - Surf6 protein_coding processed_transcript MGP_WSBEiJ_T0052388.1 MGP_WSBEiJ_G0024763.1 mouse_genomes_project 2 24756307 24769698 - MGP_WSBEiJ_P0052388 Surf6 protein_coding protein_coding MGP_WSBEiJ_T0052389.1 MGP_WSBEiJ_G0024763.1 mouse_genomes_project 2 24756644 24769669 - MGP_WSBEiJ_P0052389 Surf6 protein_coding protein_coding MGP_WSBEiJ_T0052390.1 MGP_WSBEiJ_G0024763.1 mouse_genomes_project 2 24758547 24769609 - Surf6 protein_coding processed_transcript MGP_WSBEiJ_T0052391.1 MGP_WSBEiJ_G0024763.1 mouse_genomes_project 2 24765912 24766587 - Surf6 protein_coding processed_transcript MGP_WSBEiJ_T0052189.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23351220 23378883 - MGP_WSBEiJ_P0052189 Rabl6 protein_coding protein_coding MGP_WSBEiJ_T0052190.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23352313 23361153 - Rabl6 protein_coding processed_transcript MGP_WSBEiJ_T0052191.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23352313 23378827 - Rabl6 protein_coding processed_transcript MGP_WSBEiJ_T0052192.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23352337 23353263 - Rabl6 protein_coding processed_transcript MGP_WSBEiJ_T0052193.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23353391 23354026 - Rabl6 protein_coding processed_transcript MGP_WSBEiJ_T0052194.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23353876 23356676 - Rabl6 protein_coding processed_transcript MGP_WSBEiJ_T0052195.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23356813 23358528 - Rabl6 protein_coding processed_transcript MGP_WSBEiJ_T0052196.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23356895 23378847 - Rabl6 protein_coding processed_transcript MGP_WSBEiJ_T0052197.1 MGP_WSBEiJ_G0024724.1 mouse_genomes_project 2 23366851 23378818 - Rabl6 protein_coding processed_transcript MGP_WSBEiJ_T0052055.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032484 23061240 - MGP_WSBEiJ_P0052055 Grin1 protein_coding protein_coding MGP_WSBEiJ_T0052056.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032484 23061240 - MGP_WSBEiJ_P0052056 Grin1 protein_coding protein_coding MGP_WSBEiJ_T0052057.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032484 23061215 - MGP_WSBEiJ_P0052057 Grin1 protein_coding protein_coding MGP_WSBEiJ_T0052058.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032484 23061215 - MGP_WSBEiJ_P0052058 Grin1 protein_coding protein_coding MGP_WSBEiJ_T0052059.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032484 23061240 - MGP_WSBEiJ_P0052059 Grin1 protein_coding protein_coding MGP_WSBEiJ_T0052060.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032484 23061307 - MGP_WSBEiJ_P0052060 Grin1 protein_coding protein_coding MGP_WSBEiJ_T0052061.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032484 23061215 - MGP_WSBEiJ_P0052061 Grin1 protein_coding protein_coding MGP_WSBEiJ_T0052062.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032484 23061215 - MGP_WSBEiJ_P0052062 Grin1 protein_coding protein_coding MGP_WSBEiJ_T0052063.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23032660 23045927 - Grin1 protein_coding processed_transcript MGP_WSBEiJ_T0052064.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23033361 23037983 - Grin1 protein_coding processed_transcript MGP_WSBEiJ_T0052065.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23045622 23047220 - Grin1 protein_coding processed_transcript MGP_WSBEiJ_T0052066.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23045725 23047517 - Grin1 protein_coding processed_transcript MGP_WSBEiJ_T0052067.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23052920 23061246 - Grin1 protein_coding processed_transcript MGP_WSBEiJ_T0052068.1 MGP_WSBEiJ_G0024704.1 mouse_genomes_project 2 23056520 23061283 - Grin1 protein_coding processed_transcript MGP_WSBEiJ_T0097033.1 MGP_WSBEiJ_G0035714.1 mouse_genomes_project 2 124077138 124077252 - Gm23983 rRNA rRNA MGP_WSBEiJ_T0098089.1 MGP_WSBEiJ_G0036752.1 mouse_genomes_project 2 22763336 22763440 - Gm24875 snRNA snRNA MGP_WSBEiJ_T0057799.1 MGP_WSBEiJ_G0026029.1 mouse_genomes_project 2 161131343 161149870 - Ghrh protein_coding processed_transcript MGP_WSBEiJ_T0057800.1 MGP_WSBEiJ_G0026029.1 mouse_genomes_project 2 161131343 161148999 - MGP_WSBEiJ_P0057800 Ghrh protein_coding protein_coding MGP_WSBEiJ_T0057801.1 MGP_WSBEiJ_G0026029.1 mouse_genomes_project 2 161131343 161139224 - MGP_WSBEiJ_P0057801 Ghrh protein_coding protein_coding MGP_WSBEiJ_T0054732.1 MGP_WSBEiJ_G0025232.1 mouse_genomes_project 2 87009425 87010308 - MGP_WSBEiJ_P0054732 protein_coding protein_coding MGP_WSBEiJ_T0057254.1 MGP_WSBEiJ_G0025913.1 mouse_genomes_project 2 156001129 156004906 - MGP_WSBEiJ_P0057254 Defb26 protein_coding protein_coding MGP_WSBEiJ_T0013506.1 MGP_WSBEiJ_G0011636.1 mouse_genomes_project 2 179543072 179543645 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100367.1 MGP_WSBEiJ_G0026270.1 mouse_genomes_project 2 186593671 186597018 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100368.1 MGP_WSBEiJ_G0026270.1 mouse_genomes_project 2 186593830 186596631 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0013386.1 MGP_WSBEiJ_G0011516.1 mouse_genomes_project 2 130189408 130191257 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098085.1 MGP_WSBEiJ_G0036748.1 mouse_genomes_project 2 8404265 8404398 - Gm26478 snRNA snRNA MGP_WSBEiJ_T0051849.1 MGP_WSBEiJ_G0024664.1 mouse_genomes_project 2 20798686 20845111 + MGP_WSBEiJ_P0051849 Yme1l1 protein_coding protein_coding MGP_WSBEiJ_T0051850.1 MGP_WSBEiJ_G0024664.1 mouse_genomes_project 2 20798835 20821188 + Yme1l1 protein_coding processed_transcript MGP_WSBEiJ_T0051851.1 MGP_WSBEiJ_G0024664.1 mouse_genomes_project 2 20798845 20802935 + Yme1l1 protein_coding processed_transcript MGP_WSBEiJ_T0051852.1 MGP_WSBEiJ_G0024664.1 mouse_genomes_project 2 20799150 20807523 + Yme1l1 protein_coding processed_transcript MGP_WSBEiJ_T0051853.1 MGP_WSBEiJ_G0024664.1 mouse_genomes_project 2 20811318 20817716 + Yme1l1 protein_coding processed_transcript MGP_WSBEiJ_T0051854.1 MGP_WSBEiJ_G0024664.1 mouse_genomes_project 2 20838444 20840681 + Yme1l1 protein_coding processed_transcript MGP_WSBEiJ_T0051482.1 MGP_WSBEiJ_G0024607.1 mouse_genomes_project 2 7672920 7746591 + MGP_WSBEiJ_P0051482 Sfmbt2 protein_coding protein_coding MGP_WSBEiJ_T0051483.1 MGP_WSBEiJ_G0024607.1 mouse_genomes_project 2 7672921 7746591 + MGP_WSBEiJ_P0051483 Sfmbt2 protein_coding protein_coding MGP_WSBEiJ_T0051484.1 MGP_WSBEiJ_G0024607.1 mouse_genomes_project 2 7672928 7710057 + Sfmbt2 protein_coding processed_transcript MGP_WSBEiJ_T0051485.1 MGP_WSBEiJ_G0024607.1 mouse_genomes_project 2 7675444 7746591 + MGP_WSBEiJ_P0051485 Sfmbt2 protein_coding protein_coding MGP_WSBEiJ_T0051486.1 MGP_WSBEiJ_G0024607.1 mouse_genomes_project 2 7675444 7908806 + MGP_WSBEiJ_P0051486 Sfmbt2 protein_coding protein_coding MGP_WSBEiJ_T0051487.1 MGP_WSBEiJ_G0024607.1 mouse_genomes_project 2 7675456 7697584 + Sfmbt2 protein_coding processed_transcript MGP_WSBEiJ_T0051488.1 MGP_WSBEiJ_G0024607.1 mouse_genomes_project 2 7675458 7908818 + MGP_WSBEiJ_P0051488 Sfmbt2 protein_coding protein_coding MGP_WSBEiJ_T0053686.1 MGP_WSBEiJ_G0024988.1 mouse_genomes_project 2 48633271 48802917 + MGP_WSBEiJ_P0053686 Lypd6b protein_coding protein_coding MGP_WSBEiJ_T0053687.1 MGP_WSBEiJ_G0024988.1 mouse_genomes_project 2 48633314 48784167 + Lypd6b protein_coding processed_transcript MGP_WSBEiJ_T0053688.1 MGP_WSBEiJ_G0024988.1 mouse_genomes_project 2 48689946 48795736 + Lypd6b protein_coding processed_transcript MGP_WSBEiJ_T0053689.1 MGP_WSBEiJ_G0024988.1 mouse_genomes_project 2 48784073 48802917 + MGP_WSBEiJ_P0053689 Lypd6b protein_coding unknown_likely_coding MGP_WSBEiJ_T0100692.1 MGP_WSBEiJ_G0039150.1 mouse_genomes_project 2 35464746 35465690 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0058246.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170038772 170151244 - MGP_WSBEiJ_P0058246 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058247.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170038772 170122678 - MGP_WSBEiJ_P0058247 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058248.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170038775 170148781 - MGP_WSBEiJ_P0058248 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058249.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170038775 170148781 - MGP_WSBEiJ_P0058249 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058250.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170039984 170151265 - MGP_WSBEiJ_P0058250 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058251.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170040011 170151141 - Zmynd8 protein_coding processed_transcript MGP_WSBEiJ_T0058252.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170040011 170143831 - MGP_WSBEiJ_P0058252 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058253.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170040221 170151367 - MGP_WSBEiJ_P0058253 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058254.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170088708 170141180 - MGP_WSBEiJ_P0058254 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058255.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170088760 170163127 - MGP_WSBEiJ_P0058255 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058256.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170094727 170122678 - Zmynd8 protein_coding processed_transcript MGP_WSBEiJ_T0058257.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170103364 170165825 - MGP_WSBEiJ_P0058257 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058258.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170106100 170126514 - Zmynd8 protein_coding processed_transcript MGP_WSBEiJ_T0058259.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170109062 170116630 - Zmynd8 protein_coding processed_transcript MGP_WSBEiJ_T0058260.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170116540 170142002 - Zmynd8 protein_coding processed_transcript MGP_WSBEiJ_T0058261.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170116540 170141810 - MGP_WSBEiJ_P0058261 Zmynd8 protein_coding protein_coding MGP_WSBEiJ_T0058262.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170116541 170146422 - Zmynd8 protein_coding processed_transcript MGP_WSBEiJ_T0058263.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170138399 170150703 - Zmynd8 protein_coding processed_transcript MGP_WSBEiJ_T0058264.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170140273 170150732 - Zmynd8 protein_coding retained_intron MGP_WSBEiJ_T0058265.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170140551 170141593 - Zmynd8 protein_coding retained_intron MGP_WSBEiJ_T0058266.1 MGP_WSBEiJ_G0026146.1 mouse_genomes_project 2 170140659 170151244 - Zmynd8 protein_coding retained_intron MGP_WSBEiJ_T0017219.1 MGP_WSBEiJ_G0014865.1 mouse_genomes_project 2 93238118 93261513 + D930015M05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0099363.1 MGP_WSBEiJ_G0038026.1 mouse_genomes_project 2 81032272 81032399 + Gm25420 snoRNA snoRNA MGP_WSBEiJ_T0053805.1 MGP_WSBEiJ_G0025014.1 mouse_genomes_project 2 57613611 57614574 + MGP_WSBEiJ_P0053805 Gm17409 protein_coding protein_coding MGP_WSBEiJ_T0004089.1 MGP_WSBEiJ_G0003616.1 mouse_genomes_project 2 172073738 172079287 + Gm14320 antisense antisense MGP_WSBEiJ_T0055651.1 MGP_WSBEiJ_G0025543.1 mouse_genomes_project 2 114188786 114190385 - MGP_WSBEiJ_P0055651 Chrm5 protein_coding protein_coding MGP_WSBEiJ_T0054734.1 MGP_WSBEiJ_G0025234.1 mouse_genomes_project 2 87032544 87033485 - MGP_WSBEiJ_P0054734 protein_coding protein_coding MGP_WSBEiJ_T0013495.1 MGP_WSBEiJ_G0011625.1 mouse_genomes_project 2 171437410 171437966 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098143.1 MGP_WSBEiJ_G0036806.1 mouse_genomes_project 2 186727923 186728086 + Gm25184 snRNA snRNA MGP_WSBEiJ_T0013366.1 MGP_WSBEiJ_G0011496.1 mouse_genomes_project 2 115120658 115121183 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004075.1 MGP_WSBEiJ_G0003606.1 mouse_genomes_project 2 168248133 168253024 + Gm11455 antisense antisense MGP_WSBEiJ_T0054362.1 MGP_WSBEiJ_G0025117.1 mouse_genomes_project 2 74615412 74638564 + MGP_WSBEiJ_P0054362 Gm28230 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100055.1 MGP_WSBEiJ_G0038674.1 mouse_genomes_project 2 22169994 22170580 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013275.1 MGP_WSBEiJ_G0011405.1 mouse_genomes_project 2 83798149 83798633 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100685.1 MGP_WSBEiJ_G0039143.1 mouse_genomes_project 2 33225833 33226601 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004031.1 MGP_WSBEiJ_G0003569.1 mouse_genomes_project 2 147226958 147240675 - Banf2os antisense antisense MGP_WSBEiJ_T0004032.1 MGP_WSBEiJ_G0003569.1 mouse_genomes_project 2 147227385 147240652 - Banf2os antisense antisense MGP_WSBEiJ_T0010264.1 MGP_WSBEiJ_G0008421.1 mouse_genomes_project 2 92161018 92161865 - miRNA miRNA MGP_WSBEiJ_T0057721.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160352700 160516254 + MGP_WSBEiJ_P0057721 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057722.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160352700 160516252 + MGP_WSBEiJ_P0057722 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057723.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160441820 160515065 + MGP_WSBEiJ_P0057723 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057724.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160441820 160515070 + MGP_WSBEiJ_P0057724 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057725.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160464258 160499404 + MGP_WSBEiJ_P0057725 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057726.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160464732 160514846 + Dlgap4 protein_coding retained_intron MGP_WSBEiJ_T0057727.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160464743 160499645 + MGP_WSBEiJ_P0057727 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057728.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160464746 160499482 + MGP_WSBEiJ_P0057728 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057729.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160464748 160514735 + MGP_WSBEiJ_P0057729 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057730.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160464756 160514794 + MGP_WSBEiJ_P0057730 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057731.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160465178 160516254 + MGP_WSBEiJ_P0057731 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057732.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160498560 160516261 + MGP_WSBEiJ_P0057732 Dlgap4 protein_coding protein_coding MGP_WSBEiJ_T0057733.1 MGP_WSBEiJ_G0026015.1 mouse_genomes_project 2 160511830 160514670 + Dlgap4 protein_coding processed_transcript MGP_WSBEiJ_T0057259.1 MGP_WSBEiJ_G0025918.1 mouse_genomes_project 2 156071830 156076054 - MGP_WSBEiJ_P0057259 Defb19 protein_coding protein_coding MGP_WSBEiJ_T0011328.1 MGP_WSBEiJ_G0009485.1 mouse_genomes_project 2 186020834 186020952 + Gm22842 misc_RNA misc_RNA MGP_WSBEiJ_T0057191.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154981794 155001229 + MGP_WSBEiJ_P0057191 protein_coding protein_coding MGP_WSBEiJ_T0057192.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154981796 155000033 + protein_coding processed_transcript MGP_WSBEiJ_T0057193.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154981805 154998840 + protein_coding processed_transcript MGP_WSBEiJ_T0057194.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154981805 154983898 + protein_coding retained_intron MGP_WSBEiJ_T0057195.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154981826 154999048 + protein_coding retained_intron MGP_WSBEiJ_T0057196.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154981907 154996696 + protein_coding processed_transcript MGP_WSBEiJ_T0057197.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154981928 155002023 + MGP_WSBEiJ_P0057197 protein_coding unknown_likely_coding MGP_WSBEiJ_T0057198.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154981957 154999873 + protein_coding processed_transcript MGP_WSBEiJ_T0057199.1 MGP_WSBEiJ_G0025891.1 mouse_genomes_project 2 154984630 155000033 + protein_coding processed_transcript MGP_WSBEiJ_T0007304.1 MGP_WSBEiJ_G0005993.1 mouse_genomes_project 2 174048636 174072747 + Gm14249 lincRNA lincRNA MGP_WSBEiJ_T0013265.1 MGP_WSBEiJ_G0011395.1 mouse_genomes_project 2 80799899 80800181 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058137.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169013672 169022157 + MGP_WSBEiJ_P0058137 Ctsa protein_coding protein_coding MGP_WSBEiJ_T0058138.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169013672 169021142 + MGP_WSBEiJ_P0058138 Ctsa protein_coding protein_coding MGP_WSBEiJ_T0058139.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169013686 169014559 + Ctsa protein_coding processed_transcript MGP_WSBEiJ_T0058140.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169013700 169022157 + MGP_WSBEiJ_P0058140 Ctsa protein_coding protein_coding MGP_WSBEiJ_T0058141.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169013708 169014862 + MGP_WSBEiJ_P0058141 Ctsa protein_coding protein_coding MGP_WSBEiJ_T0058142.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169013725 169014579 + Ctsa protein_coding processed_transcript MGP_WSBEiJ_T0058143.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169013725 169016491 + MGP_WSBEiJ_P0058143 Ctsa protein_coding protein_coding MGP_WSBEiJ_T0058144.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169014606 169015221 + Ctsa protein_coding retained_intron MGP_WSBEiJ_T0058145.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169014614 169017588 + MGP_WSBEiJ_P0058145 Ctsa protein_coding protein_coding MGP_WSBEiJ_T0058146.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169014646 169015674 + Ctsa protein_coding retained_intron MGP_WSBEiJ_T0058147.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169014657 169017063 + MGP_WSBEiJ_P0058147 Ctsa protein_coding protein_coding MGP_WSBEiJ_T0058148.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169014829 169015993 + Ctsa protein_coding retained_intron MGP_WSBEiJ_T0058149.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169014829 169017621 + Ctsa protein_coding retained_intron MGP_WSBEiJ_T0058150.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169014829 169020712 + MGP_WSBEiJ_P0058150 Ctsa protein_coding unknown_likely_coding MGP_WSBEiJ_T0058151.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169014872 169017058 + Ctsa protein_coding retained_intron MGP_WSBEiJ_T0058152.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169015109 169016521 + Ctsa protein_coding processed_transcript MGP_WSBEiJ_T0058153.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169015272 169016269 + Ctsa protein_coding retained_intron MGP_WSBEiJ_T0058154.1 MGP_WSBEiJ_G0026128.1 mouse_genomes_project 2 169017767 169018783 + Ctsa protein_coding retained_intron MGP_WSBEiJ_T0013503.1 MGP_WSBEiJ_G0011633.1 mouse_genomes_project 2 178913279 178913489 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051840.1 MGP_WSBEiJ_G0024662.1 mouse_genomes_project 2 20711117 20755711 + MGP_WSBEiJ_P0051840 Acbd5 protein_coding protein_coding MGP_WSBEiJ_T0051841.1 MGP_WSBEiJ_G0024662.1 mouse_genomes_project 2 20711150 20755711 + MGP_WSBEiJ_P0051841 Acbd5 protein_coding protein_coding MGP_WSBEiJ_T0051842.1 MGP_WSBEiJ_G0024662.1 mouse_genomes_project 2 20711184 20718521 + MGP_WSBEiJ_P0051842 Acbd5 protein_coding protein_coding MGP_WSBEiJ_T0051843.1 MGP_WSBEiJ_G0024662.1 mouse_genomes_project 2 20712017 20755709 + MGP_WSBEiJ_P0051843 Acbd5 protein_coding protein_coding MGP_WSBEiJ_T0051844.1 MGP_WSBEiJ_G0024662.1 mouse_genomes_project 2 20712021 20755711 + MGP_WSBEiJ_P0051844 Acbd5 protein_coding protein_coding MGP_WSBEiJ_T0051845.1 MGP_WSBEiJ_G0024662.1 mouse_genomes_project 2 20712025 20756517 + MGP_WSBEiJ_P0051845 Acbd5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051846.1 MGP_WSBEiJ_G0024662.1 mouse_genomes_project 2 20712276 20730566 + MGP_WSBEiJ_P0051846 Acbd5 protein_coding protein_coding MGP_WSBEiJ_T0013278.1 MGP_WSBEiJ_G0011408.1 mouse_genomes_project 2 83932647 83932788 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058039.1 MGP_WSBEiJ_G0026086.1 mouse_genomes_project 2 168288858 168295273 - MGP_WSBEiJ_P0058039 Wfdc5 protein_coding protein_coding MGP_WSBEiJ_T0058040.1 MGP_WSBEiJ_G0026086.1 mouse_genomes_project 2 168289998 168295129 - MGP_WSBEiJ_P0058040 Wfdc5 protein_coding protein_coding MGP_WSBEiJ_T0052021.1 MGP_WSBEiJ_G0024695.1 mouse_genomes_project 2 22977942 22979113 - MGP_WSBEiJ_P0052021 Cysrt1 protein_coding protein_coding MGP_WSBEiJ_T0052022.1 MGP_WSBEiJ_G0024695.1 mouse_genomes_project 2 22978113 22979022 - MGP_WSBEiJ_P0052022 Cysrt1 protein_coding protein_coding MGP_WSBEiJ_T0052023.1 MGP_WSBEiJ_G0024695.1 mouse_genomes_project 2 22978281 22981576 - MGP_WSBEiJ_P0052023 Cysrt1 protein_coding protein_coding MGP_WSBEiJ_T0058743.1 MGP_WSBEiJ_G0026261.1 mouse_genomes_project 2 186407967 186415623 - MGP_WSBEiJ_P0058743 Srms protein_coding protein_coding MGP_WSBEiJ_T0013479.1 MGP_WSBEiJ_G0011609.1 mouse_genomes_project 2 162334022 162334214 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055372.1 MGP_WSBEiJ_G0025454.1 mouse_genomes_project 2 104351276 104370259 + MGP_WSBEiJ_P0055372 Apip protein_coding protein_coding MGP_WSBEiJ_T0055373.1 MGP_WSBEiJ_G0025454.1 mouse_genomes_project 2 104351296 104370246 + Apip protein_coding processed_transcript MGP_WSBEiJ_T0055374.1 MGP_WSBEiJ_G0025454.1 mouse_genomes_project 2 104360536 104369405 + Apip protein_coding processed_transcript MGP_WSBEiJ_T0055375.1 MGP_WSBEiJ_G0025454.1 mouse_genomes_project 2 104369450 104370253 + Apip protein_coding processed_transcript MGP_WSBEiJ_T0054733.1 MGP_WSBEiJ_G0025233.1 mouse_genomes_project 2 87009425 87010308 - MGP_WSBEiJ_P0054733 protein_coding protein_coding MGP_WSBEiJ_T0004018.1 MGP_WSBEiJ_G0003560.1 mouse_genomes_project 2 135577414 135578672 - Gm14104 antisense antisense MGP_WSBEiJ_T0058458.1 MGP_WSBEiJ_G0026189.1 mouse_genomes_project 2 177033646 177036269 + MGP_WSBEiJ_P0058458 Mc3r protein_coding protein_coding MGP_WSBEiJ_T0004096.1 MGP_WSBEiJ_G0003623.1 mouse_genomes_project 2 177115749 177130905 + Gm14273 antisense antisense MGP_WSBEiJ_T0010322.1 MGP_WSBEiJ_G0008479.1 mouse_genomes_project 2 185387254 185387330 + Mir3091 miRNA miRNA MGP_WSBEiJ_T0098107.1 MGP_WSBEiJ_G0036770.1 mouse_genomes_project 2 75633042 75633141 - Gm24996 snRNA snRNA MGP_WSBEiJ_T0057213.1 MGP_WSBEiJ_G0025897.1 mouse_genomes_project 2 155440041 155450878 - MGP_WSBEiJ_P0057213 Fam110a protein_coding protein_coding MGP_WSBEiJ_T0057214.1 MGP_WSBEiJ_G0025897.1 mouse_genomes_project 2 155440041 155444594 - MGP_WSBEiJ_P0057214 Fam110a protein_coding protein_coding MGP_WSBEiJ_T0057215.1 MGP_WSBEiJ_G0025897.1 mouse_genomes_project 2 155440041 155444625 - MGP_WSBEiJ_P0057215 Fam110a protein_coding protein_coding MGP_WSBEiJ_T0057216.1 MGP_WSBEiJ_G0025897.1 mouse_genomes_project 2 155440380 155444053 - MGP_WSBEiJ_P0057216 Fam110a protein_coding protein_coding MGP_WSBEiJ_T0004045.1 MGP_WSBEiJ_G0003581.1 mouse_genomes_project 2 155551688 155553642 - AA387200 antisense antisense MGP_WSBEiJ_T0058854.1 MGP_WSBEiJ_G0026278.1 mouse_genomes_project 2 186815242 186819239 - MGP_WSBEiJ_P0058854 Samd10 protein_coding protein_coding MGP_WSBEiJ_T0058855.1 MGP_WSBEiJ_G0026278.1 mouse_genomes_project 2 186815245 186819225 - MGP_WSBEiJ_P0058855 Samd10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058856.1 MGP_WSBEiJ_G0026278.1 mouse_genomes_project 2 186816816 186817631 - Samd10 protein_coding retained_intron MGP_WSBEiJ_T0013175.1 MGP_WSBEiJ_G0011305.1 mouse_genomes_project 2 47093922 47094174 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057228.1 MGP_WSBEiJ_G0025903.1 mouse_genomes_project 2 155776500 155797260 + MGP_WSBEiJ_P0057228 Tbc1d20 protein_coding protein_coding MGP_WSBEiJ_T0057229.1 MGP_WSBEiJ_G0025903.1 mouse_genomes_project 2 155776523 155791377 + MGP_WSBEiJ_P0057229 Tbc1d20 protein_coding protein_coding MGP_WSBEiJ_T0057230.1 MGP_WSBEiJ_G0025903.1 mouse_genomes_project 2 155776544 155797260 + Tbc1d20 protein_coding retained_intron MGP_WSBEiJ_T0057231.1 MGP_WSBEiJ_G0025903.1 mouse_genomes_project 2 155776852 155791723 + MGP_WSBEiJ_P0057231 Tbc1d20 protein_coding protein_coding MGP_WSBEiJ_T0057232.1 MGP_WSBEiJ_G0025903.1 mouse_genomes_project 2 155791493 155794082 + Tbc1d20 protein_coding retained_intron MGP_WSBEiJ_T0054742.1 MGP_WSBEiJ_G0025241.1 mouse_genomes_project 2 87267551 87268484 - MGP_WSBEiJ_P0054742 Olfr1086 protein_coding protein_coding MGP_WSBEiJ_T0010298.1 MGP_WSBEiJ_G0008455.1 mouse_genomes_project 2 155438172 155438261 - Mir1953 miRNA miRNA MGP_WSBEiJ_T0017261.1 MGP_WSBEiJ_G0014884.1 mouse_genomes_project 2 124892247 124894374 + processed_transcript processed_transcript MGP_WSBEiJ_T0017262.1 MGP_WSBEiJ_G0014884.1 mouse_genomes_project 2 124892268 124905980 + processed_transcript processed_transcript MGP_WSBEiJ_T0007118.1 MGP_WSBEiJ_G0005842.1 mouse_genomes_project 2 72559862 72631103 - 6430710C18Rik lincRNA lincRNA MGP_WSBEiJ_T0007119.1 MGP_WSBEiJ_G0005842.1 mouse_genomes_project 2 72560521 72564852 - 6430710C18Rik lincRNA lincRNA MGP_WSBEiJ_T0007120.1 MGP_WSBEiJ_G0005842.1 mouse_genomes_project 2 72602813 72631148 - 6430710C18Rik lincRNA lincRNA MGP_WSBEiJ_T0007121.1 MGP_WSBEiJ_G0005842.1 mouse_genomes_project 2 72603130 72618278 - 6430710C18Rik lincRNA lincRNA MGP_WSBEiJ_T0056003.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122589618 122645841 - MGP_WSBEiJ_P0056003 Zfp106 protein_coding protein_coding MGP_WSBEiJ_T0056004.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122592407 122622578 - MGP_WSBEiJ_P0056004 Zfp106 protein_coding protein_coding MGP_WSBEiJ_T0056005.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122593124 122596051 - Zfp106 protein_coding retained_intron MGP_WSBEiJ_T0056006.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122602067 122603751 - Zfp106 protein_coding retained_intron MGP_WSBEiJ_T0056007.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122605924 122607846 - MGP_WSBEiJ_P0056007 Zfp106 protein_coding protein_coding MGP_WSBEiJ_T0056008.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122609496 122645848 - Zfp106 protein_coding retained_intron MGP_WSBEiJ_T0056009.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122609956 122611757 - Zfp106 protein_coding retained_intron MGP_WSBEiJ_T0056010.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122611581 122615297 - MGP_WSBEiJ_P0056010 Zfp106 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056011.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122615124 122645877 - MGP_WSBEiJ_P0056011 Zfp106 protein_coding protein_coding MGP_WSBEiJ_T0056012.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122618353 122636788 - MGP_WSBEiJ_P0056012 Zfp106 protein_coding protein_coding MGP_WSBEiJ_T0056013.1 MGP_WSBEiJ_G0025619.1 mouse_genomes_project 2 122618486 122645868 - Zfp106 protein_coding processed_transcript MGP_WSBEiJ_T0058890.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 186990308 187058561 + MGP_WSBEiJ_P0058890 Myt1 protein_coding protein_coding MGP_WSBEiJ_T0058891.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 186990372 187060952 + MGP_WSBEiJ_P0058891 Myt1 protein_coding protein_coding MGP_WSBEiJ_T0058892.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 186994014 187023830 + Myt1 protein_coding processed_transcript MGP_WSBEiJ_T0058893.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 186994288 187033770 + MGP_WSBEiJ_P0058893 Myt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058894.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 187010618 187044363 + MGP_WSBEiJ_P0058894 Myt1 protein_coding protein_coding MGP_WSBEiJ_T0058895.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 187024244 187058496 + Myt1 protein_coding retained_intron MGP_WSBEiJ_T0058896.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 187025535 187035300 + Myt1 protein_coding processed_transcript MGP_WSBEiJ_T0058897.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 187039957 187048857 + MGP_WSBEiJ_P0058897 Myt1 protein_coding protein_coding MGP_WSBEiJ_T0058898.1 MGP_WSBEiJ_G0026284.1 mouse_genomes_project 2 187048316 187050751 + Myt1 protein_coding retained_intron MGP_WSBEiJ_T0052728.1 MGP_WSBEiJ_G0024822.1 mouse_genomes_project 2 28232595 28237574 - D2Wsu81e protein_coding retained_intron MGP_WSBEiJ_T0052729.1 MGP_WSBEiJ_G0024822.1 mouse_genomes_project 2 28232595 28237587 - D2Wsu81e protein_coding retained_intron MGP_WSBEiJ_T0052730.1 MGP_WSBEiJ_G0024822.1 mouse_genomes_project 2 28232610 28236650 - D2Wsu81e protein_coding retained_intron MGP_WSBEiJ_T0052731.1 MGP_WSBEiJ_G0024822.1 mouse_genomes_project 2 28232613 28237129 - D2Wsu81e protein_coding retained_intron MGP_WSBEiJ_T0052732.1 MGP_WSBEiJ_G0024822.1 mouse_genomes_project 2 28232613 28237595 - MGP_WSBEiJ_P0052732 D2Wsu81e protein_coding protein_coding MGP_WSBEiJ_T0052733.1 MGP_WSBEiJ_G0024822.1 mouse_genomes_project 2 28232615 28237604 - D2Wsu81e protein_coding retained_intron MGP_WSBEiJ_T0052734.1 MGP_WSBEiJ_G0024822.1 mouse_genomes_project 2 28234075 28237110 - D2Wsu81e protein_coding processed_transcript MGP_WSBEiJ_T0052735.1 MGP_WSBEiJ_G0024822.1 mouse_genomes_project 2 28235507 28237600 - D2Wsu81e protein_coding retained_intron MGP_WSBEiJ_T0056440.1 MGP_WSBEiJ_G0025708.1 mouse_genomes_project 2 129731378 129744634 + MGP_WSBEiJ_P0056440 Tmem127 protein_coding protein_coding MGP_WSBEiJ_T0056441.1 MGP_WSBEiJ_G0025708.1 mouse_genomes_project 2 129731439 129740680 + MGP_WSBEiJ_P0056441 Tmem127 protein_coding protein_coding MGP_WSBEiJ_T0056442.1 MGP_WSBEiJ_G0025708.1 mouse_genomes_project 2 129731443 129741052 + MGP_WSBEiJ_P0056442 Tmem127 protein_coding protein_coding MGP_WSBEiJ_T0007128.1 MGP_WSBEiJ_G0005849.1 mouse_genomes_project 2 74581515 74583357 + Gm14396 lincRNA lincRNA MGP_WSBEiJ_T0007129.1 MGP_WSBEiJ_G0005849.1 mouse_genomes_project 2 74581596 74583357 + Gm14396 lincRNA lincRNA MGP_WSBEiJ_T0003973.1 MGP_WSBEiJ_G0003529.1 mouse_genomes_project 2 115183042 115184666 - Gm13966 antisense antisense MGP_WSBEiJ_T0013256.1 MGP_WSBEiJ_G0011386.1 mouse_genomes_project 2 77346960 77347566 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056659.1 MGP_WSBEiJ_G0025767.1 mouse_genomes_project 2 133288295 133300622 - MGP_WSBEiJ_P0056659 Ddrgk1 protein_coding protein_coding MGP_WSBEiJ_T0056660.1 MGP_WSBEiJ_G0025767.1 mouse_genomes_project 2 133290114 133290857 - Ddrgk1 protein_coding retained_intron MGP_WSBEiJ_T0056661.1 MGP_WSBEiJ_G0025767.1 mouse_genomes_project 2 133290274 133293413 - Ddrgk1 protein_coding processed_transcript MGP_WSBEiJ_T0056662.1 MGP_WSBEiJ_G0025767.1 mouse_genomes_project 2 133290370 133297798 - MGP_WSBEiJ_P0056662 Ddrgk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056663.1 MGP_WSBEiJ_G0025767.1 mouse_genomes_project 2 133291278 133299876 - Ddrgk1 protein_coding processed_transcript MGP_WSBEiJ_T0053910.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60844928 60924742 + MGP_WSBEiJ_P0053910 Tank protein_coding protein_coding MGP_WSBEiJ_T0053911.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60844929 60924742 + MGP_WSBEiJ_P0053911 Tank protein_coding protein_coding MGP_WSBEiJ_T0053912.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60844954 60924661 + Tank protein_coding processed_transcript MGP_WSBEiJ_T0053913.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60844954 60913252 + Tank protein_coding processed_transcript MGP_WSBEiJ_T0053914.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60860574 60924742 + MGP_WSBEiJ_P0053914 Tank protein_coding protein_coding MGP_WSBEiJ_T0053915.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60860594 60924742 + MGP_WSBEiJ_P0053915 Tank protein_coding protein_coding MGP_WSBEiJ_T0053916.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60860633 60922380 + MGP_WSBEiJ_P0053916 Tank protein_coding protein_coding MGP_WSBEiJ_T0053917.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60860661 60883117 + Tank protein_coding processed_transcript MGP_WSBEiJ_T0053918.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60860662 60924661 + Tank protein_coding processed_transcript MGP_WSBEiJ_T0053919.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60895396 60916763 + Tank protein_coding processed_transcript MGP_WSBEiJ_T0053920.1 MGP_WSBEiJ_G0025029.1 mouse_genomes_project 2 60913175 60920558 + Tank protein_coding processed_transcript MGP_WSBEiJ_T0004098.1 MGP_WSBEiJ_G0003625.1 mouse_genomes_project 2 177972502 177976395 + Ctcflos antisense antisense MGP_WSBEiJ_T0004099.1 MGP_WSBEiJ_G0003625.1 mouse_genomes_project 2 177972519 177993749 + Ctcflos antisense antisense MGP_WSBEiJ_T0004100.1 MGP_WSBEiJ_G0003625.1 mouse_genomes_project 2 177981363 177990785 + Ctcflos antisense antisense MGP_WSBEiJ_T0004101.1 MGP_WSBEiJ_G0003625.1 mouse_genomes_project 2 177986291 177994683 + Ctcflos antisense antisense MGP_WSBEiJ_T0054866.1 MGP_WSBEiJ_G0025348.1 mouse_genomes_project 2 90183270 90184215 - MGP_WSBEiJ_P0054866 Olfr1234 protein_coding protein_coding MGP_WSBEiJ_T0054867.1 MGP_WSBEiJ_G0025348.1 mouse_genomes_project 2 90183270 90185649 - MGP_WSBEiJ_P0054867 Olfr1234 protein_coding protein_coding MGP_WSBEiJ_T0054868.1 MGP_WSBEiJ_G0025348.1 mouse_genomes_project 2 90184351 90185653 - Olfr1234 protein_coding processed_transcript MGP_WSBEiJ_T0055928.1 MGP_WSBEiJ_G0025607.1 mouse_genomes_project 2 122098494 122103458 + MGP_WSBEiJ_P0055928 Jmjd7 protein_coding protein_coding MGP_WSBEiJ_T0055930.1 MGP_WSBEiJ_G0025607.1 mouse_genomes_project 2 122098515 122101402 + MGP_WSBEiJ_P0055930 Jmjd7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055933.1 MGP_WSBEiJ_G0025607.1 mouse_genomes_project 2 122098527 122102740 + Jmjd7 protein_coding processed_transcript MGP_WSBEiJ_T0055934.1 MGP_WSBEiJ_G0025607.1 mouse_genomes_project 2 122098568 122102257 + Jmjd7 protein_coding processed_transcript MGP_WSBEiJ_T0055935.1 MGP_WSBEiJ_G0025607.1 mouse_genomes_project 2 122098605 122101249 + MGP_WSBEiJ_P0055935 Jmjd7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051610.1 MGP_WSBEiJ_G0024621.1 mouse_genomes_project 2 10670444 10896489 - MGP_WSBEiJ_P0051610 Cubn protein_coding unknown_likely_coding MGP_WSBEiJ_T0051611.1 MGP_WSBEiJ_G0024621.1 mouse_genomes_project 2 10670451 10896489 - MGP_WSBEiJ_P0051611 Cubn protein_coding protein_coding MGP_WSBEiJ_T0051612.1 MGP_WSBEiJ_G0024621.1 mouse_genomes_project 2 10823504 10858329 - Cubn protein_coding retained_intron MGP_WSBEiJ_T0051613.1 MGP_WSBEiJ_G0024621.1 mouse_genomes_project 2 10859341 10862182 - Cubn protein_coding retained_intron MGP_WSBEiJ_T0054751.1 MGP_WSBEiJ_G0025250.1 mouse_genomes_project 2 87482934 87485043 - MGP_WSBEiJ_P0054751 protein_coding protein_coding MGP_WSBEiJ_T0054752.1 MGP_WSBEiJ_G0025250.1 mouse_genomes_project 2 87482934 87484168 - MGP_WSBEiJ_P0054752 protein_coding protein_coding MGP_WSBEiJ_T0058638.1 MGP_WSBEiJ_G0026241.1 mouse_genomes_project 2 185608258 185626952 + MGP_WSBEiJ_P0058638 Slco4a1 protein_coding protein_coding MGP_WSBEiJ_T0058639.1 MGP_WSBEiJ_G0026241.1 mouse_genomes_project 2 185608347 185626930 + Slco4a1 protein_coding processed_transcript MGP_WSBEiJ_T0058640.1 MGP_WSBEiJ_G0026241.1 mouse_genomes_project 2 185613007 185626952 + MGP_WSBEiJ_P0058640 Slco4a1 protein_coding protein_coding MGP_WSBEiJ_T0058641.1 MGP_WSBEiJ_G0026241.1 mouse_genomes_project 2 185619113 185620436 + Slco4a1 protein_coding retained_intron MGP_WSBEiJ_T0058642.1 MGP_WSBEiJ_G0026241.1 mouse_genomes_project 2 185624492 185626937 + Slco4a1 protein_coding retained_intron MGP_WSBEiJ_T0052783.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28426643 28449631 + MGP_WSBEiJ_P0052783 Fam73b protein_coding protein_coding MGP_WSBEiJ_T0052784.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28426655 28431108 + Fam73b protein_coding processed_transcript MGP_WSBEiJ_T0052785.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28426664 28441494 + MGP_WSBEiJ_P0052785 Fam73b protein_coding protein_coding MGP_WSBEiJ_T0052786.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28426676 28431715 + Fam73b protein_coding retained_intron MGP_WSBEiJ_T0052787.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28426703 28432816 + MGP_WSBEiJ_P0052787 Fam73b protein_coding protein_coding MGP_WSBEiJ_T0052788.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28426706 28449629 + MGP_WSBEiJ_P0052788 Fam73b protein_coding protein_coding MGP_WSBEiJ_T0052789.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28430105 28431716 + Fam73b protein_coding retained_intron MGP_WSBEiJ_T0052790.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28430825 28433613 + MGP_WSBEiJ_P0052790 Fam73b protein_coding protein_coding MGP_WSBEiJ_T0052791.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28433692 28439059 + Fam73b protein_coding retained_intron MGP_WSBEiJ_T0052792.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28440634 28446117 + Fam73b protein_coding retained_intron MGP_WSBEiJ_T0052793.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28445822 28448210 + MGP_WSBEiJ_P0052793 Fam73b protein_coding protein_coding MGP_WSBEiJ_T0052794.1 MGP_WSBEiJ_G0024831.1 mouse_genomes_project 2 28446053 28448316 + MGP_WSBEiJ_P0052794 Fam73b protein_coding protein_coding MGP_WSBEiJ_T0054703.1 MGP_WSBEiJ_G0025204.1 mouse_genomes_project 2 86353915 86354863 + MGP_WSBEiJ_P0054703 Olfr1022 protein_coding protein_coding MGP_WSBEiJ_T0054827.1 MGP_WSBEiJ_G0025313.1 mouse_genomes_project 2 89286596 89287536 + MGP_WSBEiJ_P0054827 protein_coding protein_coding MGP_WSBEiJ_T0099330.1 MGP_WSBEiJ_G0037993.1 mouse_genomes_project 2 17580102 17580193 + Gm25859 snoRNA snoRNA MGP_WSBEiJ_T0007151.1 MGP_WSBEiJ_G0005868.1 mouse_genomes_project 2 91987492 91992746 - Gm17281 lincRNA lincRNA MGP_WSBEiJ_T0054637.1 MGP_WSBEiJ_G0025174.1 mouse_genomes_project 2 85240416 85243645 + MGP_WSBEiJ_P0054637 Timm10 protein_coding protein_coding MGP_WSBEiJ_T0054638.1 MGP_WSBEiJ_G0025174.1 mouse_genomes_project 2 85240803 85243545 + MGP_WSBEiJ_P0054638 Timm10 protein_coding protein_coding MGP_WSBEiJ_T0013305.1 MGP_WSBEiJ_G0011435.1 mouse_genomes_project 2 92403246 92403484 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051756.1 MGP_WSBEiJ_G0024651.1 mouse_genomes_project 2 17280996 17283833 + MGP_WSBEiJ_P0051756 Otud1 protein_coding protein_coding MGP_WSBEiJ_T0056656.1 MGP_WSBEiJ_G0025766.1 mouse_genomes_project 2 133266776 133271996 - MGP_WSBEiJ_P0056656 Lzts3 protein_coding protein_coding MGP_WSBEiJ_T0056657.1 MGP_WSBEiJ_G0025766.1 mouse_genomes_project 2 133266776 133271996 - MGP_WSBEiJ_P0056657 Lzts3 protein_coding protein_coding MGP_WSBEiJ_T0056658.1 MGP_WSBEiJ_G0025766.1 mouse_genomes_project 2 133266779 133277539 - MGP_WSBEiJ_P0056658 Lzts3 protein_coding protein_coding MGP_WSBEiJ_T0007163.1 MGP_WSBEiJ_G0005876.1 mouse_genomes_project 2 95655296 95657022 - Gm13793 lincRNA lincRNA MGP_WSBEiJ_T0054849.1 MGP_WSBEiJ_G0025333.1 mouse_genomes_project 2 89862201 89863137 - MGP_WSBEiJ_P0054849 Olfr1216 protein_coding protein_coding MGP_WSBEiJ_T0001070.1 MGP_WSBEiJ_G0001004.1 mouse_genomes_project 2 174200994 174205258 - TEC TEC MGP_WSBEiJ_T0053537.1 MGP_WSBEiJ_G0024968.1 mouse_genomes_project 2 37168150 37187257 - MGP_WSBEiJ_P0053537 Nr5a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0053538.1 MGP_WSBEiJ_G0024968.1 mouse_genomes_project 2 37176819 37186696 - Nr5a1 protein_coding retained_intron MGP_WSBEiJ_T0056393.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129242611 129332555 - MGP_WSBEiJ_P0056393 Trpm7 protein_coding protein_coding MGP_WSBEiJ_T0056394.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129242617 129332442 - MGP_WSBEiJ_P0056394 Trpm7 protein_coding protein_coding MGP_WSBEiJ_T0056395.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129242630 129246704 - Trpm7 protein_coding retained_intron MGP_WSBEiJ_T0056396.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129243874 129253764 - Trpm7 protein_coding retained_intron MGP_WSBEiJ_T0056397.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129243945 129249001 - MGP_WSBEiJ_P0056397 Trpm7 protein_coding protein_coding MGP_WSBEiJ_T0056398.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129248148 129248984 - Trpm7 protein_coding retained_intron MGP_WSBEiJ_T0056399.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129248437 129256204 - Trpm7 protein_coding processed_transcript MGP_WSBEiJ_T0056400.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129264070 129268682 - Trpm7 protein_coding retained_intron MGP_WSBEiJ_T0056401.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129280316 129286463 - Trpm7 protein_coding retained_intron MGP_WSBEiJ_T0056402.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129283432 129332511 - Trpm7 protein_coding retained_intron MGP_WSBEiJ_T0056403.1 MGP_WSBEiJ_G0025699.1 mouse_genomes_project 2 129283435 129286802 - Trpm7 protein_coding retained_intron MGP_WSBEiJ_T0051599.1 MGP_WSBEiJ_G0024619.1 mouse_genomes_project 2 10386939 10395239 - MGP_WSBEiJ_P0051599 C1ql3 protein_coding protein_coding MGP_WSBEiJ_T0055937.1 MGP_WSBEiJ_G0025609.1 mouse_genomes_project 2 122104280 122112815 + protein_coding retained_intron MGP_WSBEiJ_T0055938.1 MGP_WSBEiJ_G0025609.1 mouse_genomes_project 2 122104296 122113876 + protein_coding retained_intron MGP_WSBEiJ_T0055939.1 MGP_WSBEiJ_G0025609.1 mouse_genomes_project 2 122104296 122112814 + MGP_WSBEiJ_P0055939 protein_coding protein_coding MGP_WSBEiJ_T0055940.1 MGP_WSBEiJ_G0025609.1 mouse_genomes_project 2 122105406 122106981 + protein_coding retained_intron MGP_WSBEiJ_T0055941.1 MGP_WSBEiJ_G0025609.1 mouse_genomes_project 2 122109718 122111298 + protein_coding retained_intron MGP_WSBEiJ_T0055942.1 MGP_WSBEiJ_G0025609.1 mouse_genomes_project 2 122111819 122112540 + protein_coding retained_intron MGP_WSBEiJ_T0013328.1 MGP_WSBEiJ_G0011458.1 mouse_genomes_project 2 103446901 103447916 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052220.1 MGP_WSBEiJ_G0024733.1 mouse_genomes_project 2 23484024 23485007 + MGP_WSBEiJ_P0052220 Bmyc protein_coding protein_coding MGP_WSBEiJ_T0057141.1 MGP_WSBEiJ_G0025881.1 mouse_genomes_project 2 154046512 154099002 - MGP_WSBEiJ_P0057141 Acss1 protein_coding protein_coding MGP_WSBEiJ_T0057142.1 MGP_WSBEiJ_G0025881.1 mouse_genomes_project 2 154056669 154066635 - Acss1 protein_coding processed_transcript MGP_WSBEiJ_T0057143.1 MGP_WSBEiJ_G0025881.1 mouse_genomes_project 2 154056749 154066633 - Acss1 protein_coding processed_transcript MGP_WSBEiJ_T0057144.1 MGP_WSBEiJ_G0025881.1 mouse_genomes_project 2 154066499 154099244 - Acss1 protein_coding processed_transcript MGP_WSBEiJ_T0057145.1 MGP_WSBEiJ_G0025881.1 mouse_genomes_project 2 154090342 154098958 - Acss1 protein_coding retained_intron MGP_WSBEiJ_T0054994.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91772933 91783895 - MGP_WSBEiJ_P0054994 Slc39a13 protein_coding protein_coding MGP_WSBEiJ_T0054995.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91772933 91783707 - MGP_WSBEiJ_P0054995 Slc39a13 protein_coding protein_coding MGP_WSBEiJ_T0054996.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91774015 91783761 - MGP_WSBEiJ_P0054996 Slc39a13 protein_coding protein_coding MGP_WSBEiJ_T0054997.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91774263 91776588 - Slc39a13 protein_coding processed_transcript MGP_WSBEiJ_T0054998.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91774266 91775528 - Slc39a13 protein_coding processed_transcript MGP_WSBEiJ_T0054999.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91774546 91783776 - Slc39a13 protein_coding processed_transcript MGP_WSBEiJ_T0055000.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91775782 91777318 - Slc39a13 protein_coding processed_transcript MGP_WSBEiJ_T0055001.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91776722 91783717 - Slc39a13 protein_coding processed_transcript MGP_WSBEiJ_T0055002.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91777187 91783665 - MGP_WSBEiJ_P0055002 Slc39a13 protein_coding protein_coding MGP_WSBEiJ_T0055003.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91781908 91782349 - Slc39a13 protein_coding processed_transcript MGP_WSBEiJ_T0055004.1 MGP_WSBEiJ_G0025393.1 mouse_genomes_project 2 91782595 91783717 - Slc39a13 protein_coding processed_transcript MGP_WSBEiJ_T0052761.1 MGP_WSBEiJ_G0024828.1 mouse_genomes_project 2 28340263 28342367 - MGP_WSBEiJ_P0052761 Dolk protein_coding protein_coding MGP_WSBEiJ_T0013193.1 MGP_WSBEiJ_G0011323.1 mouse_genomes_project 2 53266038 53266855 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017156.1 MGP_WSBEiJ_G0014823.1 mouse_genomes_project 2 24291591 24305577 + 0610009E02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017157.1 MGP_WSBEiJ_G0014823.1 mouse_genomes_project 2 24291819 24304193 + 0610009E02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017158.1 MGP_WSBEiJ_G0014823.1 mouse_genomes_project 2 24291837 24305588 + 0610009E02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0056478.1 MGP_WSBEiJ_G0025718.1 mouse_genomes_project 2 130087961 130107575 + MGP_WSBEiJ_P0056478 Mrps5 protein_coding protein_coding MGP_WSBEiJ_T0056479.1 MGP_WSBEiJ_G0025718.1 mouse_genomes_project 2 130088158 130105269 + Mrps5 protein_coding retained_intron MGP_WSBEiJ_T0056480.1 MGP_WSBEiJ_G0025718.1 mouse_genomes_project 2 130088158 130096815 + Mrps5 protein_coding retained_intron MGP_WSBEiJ_T0056481.1 MGP_WSBEiJ_G0025718.1 mouse_genomes_project 2 130091180 130096453 + MGP_WSBEiJ_P0056481 Mrps5 protein_coding protein_coding MGP_WSBEiJ_T0056482.1 MGP_WSBEiJ_G0025718.1 mouse_genomes_project 2 130096430 130099134 + Mrps5 protein_coding retained_intron MGP_WSBEiJ_T0056483.1 MGP_WSBEiJ_G0025718.1 mouse_genomes_project 2 130100583 130104602 + Mrps5 protein_coding retained_intron MGP_WSBEiJ_T0056484.1 MGP_WSBEiJ_G0025718.1 mouse_genomes_project 2 130100790 130102003 + Mrps5 protein_coding retained_intron MGP_WSBEiJ_T0007117.1 MGP_WSBEiJ_G0005841.1 mouse_genomes_project 2 72516160 72543143 + 8430437L04Rik lincRNA lincRNA MGP_WSBEiJ_T0052425.1 MGP_WSBEiJ_G0024770.1 mouse_genomes_project 2 24825622 24837192 - MGP_WSBEiJ_P0052425 Rexo4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0052426.1 MGP_WSBEiJ_G0024770.1 mouse_genomes_project 2 24826664 24837222 - MGP_WSBEiJ_P0052426 Rexo4 protein_coding protein_coding MGP_WSBEiJ_T0052427.1 MGP_WSBEiJ_G0024770.1 mouse_genomes_project 2 24827069 24828388 - Rexo4 protein_coding processed_transcript MGP_WSBEiJ_T0052428.1 MGP_WSBEiJ_G0024770.1 mouse_genomes_project 2 24828401 24837221 - Rexo4 protein_coding processed_transcript MGP_WSBEiJ_T0052429.1 MGP_WSBEiJ_G0024770.1 mouse_genomes_project 2 24830104 24833209 - Rexo4 protein_coding processed_transcript MGP_WSBEiJ_T0052430.1 MGP_WSBEiJ_G0024770.1 mouse_genomes_project 2 24835821 24837267 - Rexo4 protein_coding processed_transcript MGP_WSBEiJ_T0056929.1 MGP_WSBEiJ_G0025822.1 mouse_genomes_project 2 143179542 143215038 + MGP_WSBEiJ_P0056929 Ndufaf5 protein_coding protein_coding MGP_WSBEiJ_T0056930.1 MGP_WSBEiJ_G0025822.1 mouse_genomes_project 2 143179606 143181199 + Ndufaf5 protein_coding retained_intron MGP_WSBEiJ_T0056931.1 MGP_WSBEiJ_G0025822.1 mouse_genomes_project 2 143179915 143214981 + Ndufaf5 protein_coding processed_transcript MGP_WSBEiJ_T0096815.1 MGP_WSBEiJ_G0035496.1 mouse_genomes_project 2 104377120 104377523 + pseudogene pseudogene MGP_WSBEiJ_T0007223.1 MGP_WSBEiJ_G0005924.1 mouse_genomes_project 2 135306758 135363510 + AU019990 lincRNA lincRNA MGP_WSBEiJ_T0007224.1 MGP_WSBEiJ_G0005924.1 mouse_genomes_project 2 135306758 135367414 + AU019990 lincRNA lincRNA MGP_WSBEiJ_T0007107.1 MGP_WSBEiJ_G0005831.1 mouse_genomes_project 2 61744937 61748650 - Gm13564 lincRNA lincRNA MGP_WSBEiJ_T0058673.1 MGP_WSBEiJ_G0026249.1 mouse_genomes_project 2 185893221 185914671 + MGP_WSBEiJ_P0058673 Slc17a9 protein_coding protein_coding MGP_WSBEiJ_T0058674.1 MGP_WSBEiJ_G0026249.1 mouse_genomes_project 2 185893337 185905572 + Slc17a9 protein_coding retained_intron MGP_WSBEiJ_T0058675.1 MGP_WSBEiJ_G0026249.1 mouse_genomes_project 2 185893358 185908287 + Slc17a9 protein_coding processed_transcript MGP_WSBEiJ_T0058676.1 MGP_WSBEiJ_G0026249.1 mouse_genomes_project 2 185907592 185913730 + Slc17a9 protein_coding processed_transcript MGP_WSBEiJ_T0058677.1 MGP_WSBEiJ_G0026249.1 mouse_genomes_project 2 185909448 185913808 + Slc17a9 protein_coding retained_intron MGP_WSBEiJ_T0055601.1 MGP_WSBEiJ_G0025506.1 mouse_genomes_project 2 112890612 112925859 + MGP_WSBEiJ_P0055601 Olfr1278 protein_coding protein_coding MGP_WSBEiJ_T0004065.1 MGP_WSBEiJ_G0003600.1 mouse_genomes_project 2 166405738 166408869 + Ptprtos antisense antisense MGP_WSBEiJ_T0055650.1 MGP_WSBEiJ_G0025542.1 mouse_genomes_project 2 114164440 114182597 + MGP_WSBEiJ_P0055650 Emc7 protein_coding protein_coding MGP_WSBEiJ_T0010287.1 MGP_WSBEiJ_G0008444.1 mouse_genomes_project 2 130395763 130395889 + Gm22411 miRNA miRNA MGP_WSBEiJ_T0051412.1 MGP_WSBEiJ_G0024594.1 mouse_genomes_project 2 3067291 3181735 + MGP_WSBEiJ_P0051412 Upf2 protein_coding protein_coding MGP_WSBEiJ_T0051413.1 MGP_WSBEiJ_G0024594.1 mouse_genomes_project 2 3078016 3181737 + MGP_WSBEiJ_P0051413 Upf2 protein_coding protein_coding MGP_WSBEiJ_T0051414.1 MGP_WSBEiJ_G0024594.1 mouse_genomes_project 2 3173761 3180534 + Upf2 protein_coding processed_transcript MGP_WSBEiJ_T0054527.1 MGP_WSBEiJ_G0025149.1 mouse_genomes_project 2 80938935 80953032 + MGP_WSBEiJ_P0054527 Dusp19 protein_coding protein_coding MGP_WSBEiJ_T0054528.1 MGP_WSBEiJ_G0025149.1 mouse_genomes_project 2 80938990 80953101 + Dusp19 protein_coding processed_transcript MGP_WSBEiJ_T0054529.1 MGP_WSBEiJ_G0025149.1 mouse_genomes_project 2 80939116 80952195 + Dusp19 protein_coding processed_transcript MGP_WSBEiJ_T0054530.1 MGP_WSBEiJ_G0025149.1 mouse_genomes_project 2 80939121 80946188 + Dusp19 protein_coding processed_transcript MGP_WSBEiJ_T0054532.1 MGP_WSBEiJ_G0025149.1 mouse_genomes_project 2 80939156 80953732 + Dusp19 protein_coding processed_transcript MGP_WSBEiJ_T0058132.1 MGP_WSBEiJ_G0026125.1 mouse_genomes_project 2 169003488 169007674 + MGP_WSBEiJ_P0058132 Zswim1 protein_coding protein_coding MGP_WSBEiJ_T0058133.1 MGP_WSBEiJ_G0026125.1 mouse_genomes_project 2 169003815 169006071 + MGP_WSBEiJ_P0058133 Zswim1 protein_coding protein_coding MGP_WSBEiJ_T0004063.1 MGP_WSBEiJ_G0003598.1 mouse_genomes_project 2 164718435 164726418 - Gm27206 antisense antisense MGP_WSBEiJ_T0051600.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10460563 10665605 - MGP_WSBEiJ_P0051600 Rsu1 protein_coding protein_coding MGP_WSBEiJ_T0051601.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10460754 10665687 - MGP_WSBEiJ_P0051601 Rsu1 protein_coding protein_coding MGP_WSBEiJ_T0051602.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10460937 10665666 - MGP_WSBEiJ_P0051602 Rsu1 protein_coding protein_coding MGP_WSBEiJ_T0051603.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10552985 10665580 - Rsu1 protein_coding retained_intron MGP_WSBEiJ_T0051604.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10607311 10665605 - Rsu1 protein_coding retained_intron MGP_WSBEiJ_T0051605.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10608077 10665542 - MGP_WSBEiJ_P0051605 Rsu1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051606.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10609865 10665493 - Rsu1 protein_coding retained_intron MGP_WSBEiJ_T0051607.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10610378 10665563 - MGP_WSBEiJ_P0051607 Rsu1 protein_coding protein_coding MGP_WSBEiJ_T0051608.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10661722 10665583 - Rsu1 protein_coding retained_intron MGP_WSBEiJ_T0051609.1 MGP_WSBEiJ_G0024620.1 mouse_genomes_project 2 10665031 10665568 - Rsu1 protein_coding retained_intron MGP_WSBEiJ_T0013135.1 MGP_WSBEiJ_G0011265.1 mouse_genomes_project 2 30212023 30213429 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057138.1 MGP_WSBEiJ_G0025880.1 mouse_genomes_project 2 154008047 154036975 - MGP_WSBEiJ_P0057138 Apmap protein_coding protein_coding MGP_WSBEiJ_T0057139.1 MGP_WSBEiJ_G0025880.1 mouse_genomes_project 2 154012094 154028664 - Apmap protein_coding processed_transcript MGP_WSBEiJ_T0057140.1 MGP_WSBEiJ_G0025880.1 mouse_genomes_project 2 154022785 154036952 - Apmap protein_coding processed_transcript MGP_WSBEiJ_T0099407.1 MGP_WSBEiJ_G0038070.1 mouse_genomes_project 2 171409154 171409247 + Gm25878 snoRNA snoRNA MGP_WSBEiJ_T0004109.1 MGP_WSBEiJ_G0003630.1 mouse_genomes_project 2 185482986 185490892 + Gata5os antisense antisense MGP_WSBEiJ_T0013140.1 MGP_WSBEiJ_G0011270.1 mouse_genomes_project 2 33355929 33356096 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057440.1 MGP_WSBEiJ_G0025971.1 mouse_genomes_project 2 158267893 158314673 + MGP_WSBEiJ_P0057440 Zfp341 protein_coding protein_coding MGP_WSBEiJ_T0057441.1 MGP_WSBEiJ_G0025971.1 mouse_genomes_project 2 158267952 158314630 + MGP_WSBEiJ_P0057441 Zfp341 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057442.1 MGP_WSBEiJ_G0025971.1 mouse_genomes_project 2 158267966 158314630 + MGP_WSBEiJ_P0057442 Zfp341 protein_coding protein_coding MGP_WSBEiJ_T0004011.1 MGP_WSBEiJ_G0003558.1 mouse_genomes_project 2 135191112 135213833 + 1700026D11Rik antisense antisense MGP_WSBEiJ_T0004012.1 MGP_WSBEiJ_G0003558.1 mouse_genomes_project 2 135191194 135213874 + 1700026D11Rik antisense antisense MGP_WSBEiJ_T0004013.1 MGP_WSBEiJ_G0003558.1 mouse_genomes_project 2 135191194 135216768 + 1700026D11Rik antisense antisense MGP_WSBEiJ_T0004014.1 MGP_WSBEiJ_G0003558.1 mouse_genomes_project 2 135191206 135226923 + 1700026D11Rik antisense antisense MGP_WSBEiJ_T0004015.1 MGP_WSBEiJ_G0003558.1 mouse_genomes_project 2 135191222 135226724 + 1700026D11Rik antisense antisense MGP_WSBEiJ_T0004016.1 MGP_WSBEiJ_G0003558.1 mouse_genomes_project 2 135191222 135213834 + 1700026D11Rik antisense antisense MGP_WSBEiJ_T0004078.1 MGP_WSBEiJ_G0003608.1 mouse_genomes_project 2 168590832 168591891 - Gm14302 antisense antisense MGP_WSBEiJ_T0055529.1 MGP_WSBEiJ_G0025484.1 mouse_genomes_project 2 107336530 107391450 + MGP_WSBEiJ_P0055529 Immp1l protein_coding protein_coding MGP_WSBEiJ_T0056857.1 MGP_WSBEiJ_G0025806.1 mouse_genomes_project 2 137325660 137377064 - MGP_WSBEiJ_P0056857 Hao1 protein_coding protein_coding MGP_WSBEiJ_T0056858.1 MGP_WSBEiJ_G0025806.1 mouse_genomes_project 2 137353147 137377003 - Hao1 protein_coding processed_transcript MGP_WSBEiJ_T0058514.1 MGP_WSBEiJ_G0026210.1 mouse_genomes_project 2 178640024 178693556 + MGP_WSBEiJ_P0058514 Vapb protein_coding protein_coding MGP_WSBEiJ_T0058515.1 MGP_WSBEiJ_G0026210.1 mouse_genomes_project 2 178672847 178684490 + Vapb protein_coding processed_transcript MGP_WSBEiJ_T0003827.1 MGP_WSBEiJ_G0003423.1 mouse_genomes_project 2 12226406 12251183 - Gm13269 antisense antisense MGP_WSBEiJ_T0003828.1 MGP_WSBEiJ_G0003423.1 mouse_genomes_project 2 12226406 12254835 - Gm13269 antisense antisense MGP_WSBEiJ_T0000995.1 MGP_WSBEiJ_G0000930.1 mouse_genomes_project 2 8499457 8500383 + TEC TEC MGP_WSBEiJ_T0053846.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59010884 59043138 - MGP_WSBEiJ_P0053846 Wdsub1 protein_coding protein_coding MGP_WSBEiJ_T0053847.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59014990 59043101 - MGP_WSBEiJ_P0053847 Wdsub1 protein_coding protein_coding MGP_WSBEiJ_T0053848.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59021117 59022520 - Wdsub1 protein_coding processed_transcript MGP_WSBEiJ_T0053849.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59021126 59021474 - Wdsub1 protein_coding processed_transcript MGP_WSBEiJ_T0053850.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59021354 59037396 - MGP_WSBEiJ_P0053850 Wdsub1 protein_coding protein_coding MGP_WSBEiJ_T0053851.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59021481 59023355 - Wdsub1 protein_coding processed_transcript MGP_WSBEiJ_T0053852.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59022466 59043111 - Wdsub1 protein_coding processed_transcript MGP_WSBEiJ_T0053853.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59030965 59038718 - MGP_WSBEiJ_P0053853 Wdsub1 protein_coding protein_coding MGP_WSBEiJ_T0053854.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59033588 59038900 - Wdsub1 protein_coding processed_transcript MGP_WSBEiJ_T0053855.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59037220 59043140 - MGP_WSBEiJ_P0053855 Wdsub1 protein_coding protein_coding MGP_WSBEiJ_T0053856.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59037221 59043128 - MGP_WSBEiJ_P0053856 Wdsub1 protein_coding protein_coding MGP_WSBEiJ_T0053857.1 MGP_WSBEiJ_G0025021.1 mouse_genomes_project 2 59038885 59043145 - Wdsub1 protein_coding processed_transcript MGP_WSBEiJ_T0013282.1 MGP_WSBEiJ_G0011412.1 mouse_genomes_project 2 85076927 85082507 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052532.1 MGP_WSBEiJ_G0024793.1 mouse_genomes_project 2 26514524 26532895 - MGP_WSBEiJ_P0052532 Gtf3c5 protein_coding protein_coding MGP_WSBEiJ_T0052533.1 MGP_WSBEiJ_G0024793.1 mouse_genomes_project 2 26514525 26532805 - MGP_WSBEiJ_P0052533 Gtf3c5 protein_coding protein_coding MGP_WSBEiJ_T0052534.1 MGP_WSBEiJ_G0024793.1 mouse_genomes_project 2 26521915 26523591 - Gtf3c5 protein_coding retained_intron MGP_WSBEiJ_T0052535.1 MGP_WSBEiJ_G0024793.1 mouse_genomes_project 2 26528722 26532883 - Gtf3c5 protein_coding retained_intron MGP_WSBEiJ_T0052536.1 MGP_WSBEiJ_G0024793.1 mouse_genomes_project 2 26529255 26532604 - MGP_WSBEiJ_P0052536 Gtf3c5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052537.1 MGP_WSBEiJ_G0024793.1 mouse_genomes_project 2 26532620 26533367 - Gtf3c5 protein_coding processed_transcript MGP_WSBEiJ_T0057080.1 MGP_WSBEiJ_G0025855.1 mouse_genomes_project 2 150268609 150339066 + MGP_WSBEiJ_P0057080 Xrn2 protein_coding protein_coding MGP_WSBEiJ_T0057081.1 MGP_WSBEiJ_G0025855.1 mouse_genomes_project 2 150288867 150297189 + Xrn2 protein_coding retained_intron MGP_WSBEiJ_T0057082.1 MGP_WSBEiJ_G0025855.1 mouse_genomes_project 2 150301469 150307011 + Xrn2 protein_coding retained_intron MGP_WSBEiJ_T0057083.1 MGP_WSBEiJ_G0025855.1 mouse_genomes_project 2 150320614 150329059 + Xrn2 protein_coding retained_intron MGP_WSBEiJ_T0058500.1 MGP_WSBEiJ_G0026204.1 mouse_genomes_project 2 178071701 178085332 - MGP_WSBEiJ_P0058500 Zbp1 protein_coding protein_coding MGP_WSBEiJ_T0058501.1 MGP_WSBEiJ_G0026204.1 mouse_genomes_project 2 178071704 178085306 - Zbp1 protein_coding retained_intron MGP_WSBEiJ_T0058502.1 MGP_WSBEiJ_G0026204.1 mouse_genomes_project 2 178080167 178085319 - MGP_WSBEiJ_P0058502 Zbp1 protein_coding protein_coding MGP_WSBEiJ_T0058653.1 MGP_WSBEiJ_G0026245.1 mouse_genomes_project 2 185758660 185785942 + MGP_WSBEiJ_P0058653 Col9a3 protein_coding protein_coding MGP_WSBEiJ_T0058654.1 MGP_WSBEiJ_G0026245.1 mouse_genomes_project 2 185759028 185785938 + MGP_WSBEiJ_P0058654 Col9a3 protein_coding protein_coding MGP_WSBEiJ_T0058655.1 MGP_WSBEiJ_G0026245.1 mouse_genomes_project 2 185759612 185767676 + Col9a3 protein_coding retained_intron MGP_WSBEiJ_T0058656.1 MGP_WSBEiJ_G0026245.1 mouse_genomes_project 2 185765083 185775316 + Col9a3 protein_coding retained_intron MGP_WSBEiJ_T0058657.1 MGP_WSBEiJ_G0026245.1 mouse_genomes_project 2 185776001 185785051 + Col9a3 protein_coding retained_intron MGP_WSBEiJ_T0058658.1 MGP_WSBEiJ_G0026245.1 mouse_genomes_project 2 185778154 185785355 + Col9a3 protein_coding retained_intron MGP_WSBEiJ_T0100732.1 MGP_WSBEiJ_G0039190.1 mouse_genomes_project 2 91067045 91067975 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0017289.1 MGP_WSBEiJ_G0014896.1 mouse_genomes_project 2 142216344 142654810 - processed_transcript processed_transcript MGP_WSBEiJ_T0013189.1 MGP_WSBEiJ_G0011319.1 mouse_genomes_project 2 50880684 50881221 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007169.1 MGP_WSBEiJ_G0005882.1 mouse_genomes_project 2 104456975 104462071 + Gm13874 lincRNA lincRNA MGP_WSBEiJ_T0007170.1 MGP_WSBEiJ_G0005882.1 mouse_genomes_project 2 104457359 104462071 + Gm13874 lincRNA lincRNA MGP_WSBEiJ_T0007171.1 MGP_WSBEiJ_G0005882.1 mouse_genomes_project 2 104461404 104467049 + Gm13874 lincRNA lincRNA MGP_WSBEiJ_T0054805.1 MGP_WSBEiJ_G0025293.1 mouse_genomes_project 2 88609581 88610526 - MGP_WSBEiJ_P0054805 Olfr1155 protein_coding protein_coding MGP_WSBEiJ_T0055049.1 MGP_WSBEiJ_G0025398.1 mouse_genomes_project 2 91933594 91940600 + MGP_WSBEiJ_P0055049 Acp2 protein_coding protein_coding MGP_WSBEiJ_T0055050.1 MGP_WSBEiJ_G0025398.1 mouse_genomes_project 2 91933618 91947529 + MGP_WSBEiJ_P0055050 Acp2 protein_coding protein_coding MGP_WSBEiJ_T0055051.1 MGP_WSBEiJ_G0025398.1 mouse_genomes_project 2 91933633 91945571 + Acp2 protein_coding retained_intron MGP_WSBEiJ_T0055052.1 MGP_WSBEiJ_G0025398.1 mouse_genomes_project 2 91933633 91936754 + MGP_WSBEiJ_P0055052 Acp2 protein_coding protein_coding MGP_WSBEiJ_T0055053.1 MGP_WSBEiJ_G0025398.1 mouse_genomes_project 2 91933637 91934363 + Acp2 protein_coding processed_transcript MGP_WSBEiJ_T0055054.1 MGP_WSBEiJ_G0025398.1 mouse_genomes_project 2 91933701 91947531 + MGP_WSBEiJ_P0055054 Acp2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051876.1 MGP_WSBEiJ_G0024674.1 mouse_genomes_project 2 22008316 22023929 + MGP_WSBEiJ_P0051876 Il1rn protein_coding protein_coding MGP_WSBEiJ_T0051877.1 MGP_WSBEiJ_G0024674.1 mouse_genomes_project 2 22008319 22010873 + Il1rn protein_coding retained_intron MGP_WSBEiJ_T0051878.1 MGP_WSBEiJ_G0024674.1 mouse_genomes_project 2 22008319 22021896 + MGP_WSBEiJ_P0051878 Il1rn protein_coding protein_coding MGP_WSBEiJ_T0051879.1 MGP_WSBEiJ_G0024674.1 mouse_genomes_project 2 22017789 22022246 + MGP_WSBEiJ_P0051879 Il1rn protein_coding protein_coding MGP_WSBEiJ_T0051880.1 MGP_WSBEiJ_G0024674.1 mouse_genomes_project 2 22017811 22023371 + MGP_WSBEiJ_P0051880 Il1rn protein_coding protein_coding MGP_WSBEiJ_T0051881.1 MGP_WSBEiJ_G0024674.1 mouse_genomes_project 2 22017849 22018793 + Il1rn protein_coding processed_transcript MGP_WSBEiJ_T0007052.1 MGP_WSBEiJ_G0005787.1 mouse_genomes_project 2 23071949 23077951 - AA543186 lincRNA lincRNA MGP_WSBEiJ_T0054799.1 MGP_WSBEiJ_G0025287.1 mouse_genomes_project 2 88497039 88498017 + MGP_WSBEiJ_P0054799 Olfr1145 protein_coding protein_coding MGP_WSBEiJ_T0058496.1 MGP_WSBEiJ_G0026203.1 mouse_genomes_project 2 178015623 178021830 + MGP_WSBEiJ_P0058496 Pck1 protein_coding protein_coding MGP_WSBEiJ_T0058497.1 MGP_WSBEiJ_G0026203.1 mouse_genomes_project 2 178015648 178017385 + Pck1 protein_coding processed_transcript MGP_WSBEiJ_T0058498.1 MGP_WSBEiJ_G0026203.1 mouse_genomes_project 2 178015648 178017035 + Pck1 protein_coding retained_intron MGP_WSBEiJ_T0058499.1 MGP_WSBEiJ_G0026203.1 mouse_genomes_project 2 178015657 178021828 + Pck1 protein_coding retained_intron MGP_WSBEiJ_T0056485.1 MGP_WSBEiJ_G0025719.1 mouse_genomes_project 2 130136970 130161315 - MGP_WSBEiJ_P0056485 Mal protein_coding protein_coding MGP_WSBEiJ_T0056486.1 MGP_WSBEiJ_G0025719.1 mouse_genomes_project 2 130138616 130160839 - MGP_WSBEiJ_P0056486 Mal protein_coding protein_coding MGP_WSBEiJ_T0055611.1 MGP_WSBEiJ_G0025516.1 mouse_genomes_project 2 113179274 113180213 + MGP_WSBEiJ_P0055611 Olfr1288 protein_coding protein_coding MGP_WSBEiJ_T0003961.1 MGP_WSBEiJ_G0003523.1 mouse_genomes_project 2 105604181 105608238 + Gm13883 antisense antisense MGP_WSBEiJ_T0003962.1 MGP_WSBEiJ_G0003523.1 mouse_genomes_project 2 105604181 105625459 + Gm13883 antisense antisense MGP_WSBEiJ_T0011308.1 MGP_WSBEiJ_G0009465.1 mouse_genomes_project 2 106523931 106524053 - Gm27636 misc_RNA misc_RNA MGP_WSBEiJ_T0057905.1 MGP_WSBEiJ_G0026053.1 mouse_genomes_project 2 164541455 164595764 - MGP_WSBEiJ_P0057905 protein_coding protein_coding MGP_WSBEiJ_T0058337.1 MGP_WSBEiJ_G0026160.1 mouse_genomes_project 2 171687238 171738053 - MGP_WSBEiJ_P0058337 B4galt5 protein_coding protein_coding MGP_WSBEiJ_T0058338.1 MGP_WSBEiJ_G0026160.1 mouse_genomes_project 2 171690050 171694554 - MGP_WSBEiJ_P0058338 B4galt5 protein_coding protein_coding MGP_WSBEiJ_T0058339.1 MGP_WSBEiJ_G0026160.1 mouse_genomes_project 2 171696465 171702704 - B4galt5 protein_coding processed_transcript MGP_WSBEiJ_T0058340.1 MGP_WSBEiJ_G0026160.1 mouse_genomes_project 2 171696465 171702749 - B4galt5 protein_coding processed_transcript MGP_WSBEiJ_T0054201.1 MGP_WSBEiJ_G0025083.1 mouse_genomes_project 2 70818666 70847469 + MGP_WSBEiJ_P0054201 Cybrd1 protein_coding protein_coding MGP_WSBEiJ_T0001018.1 MGP_WSBEiJ_G0000953.1 mouse_genomes_project 2 12195343 12198025 + TEC TEC MGP_WSBEiJ_T0055753.1 MGP_WSBEiJ_G0025567.1 mouse_genomes_project 2 120501400 120523225 - MGP_WSBEiJ_P0055753 Bmf protein_coding protein_coding MGP_WSBEiJ_T0055754.1 MGP_WSBEiJ_G0025567.1 mouse_genomes_project 2 120502875 120521093 - MGP_WSBEiJ_P0055754 Bmf protein_coding protein_coding MGP_WSBEiJ_T0055755.1 MGP_WSBEiJ_G0025567.1 mouse_genomes_project 2 120504613 120518111 - Bmf protein_coding processed_transcript MGP_WSBEiJ_T0055756.1 MGP_WSBEiJ_G0025567.1 mouse_genomes_project 2 120504694 120518839 - Bmf protein_coding processed_transcript MGP_WSBEiJ_T0055757.1 MGP_WSBEiJ_G0025567.1 mouse_genomes_project 2 120505061 120523200 - Bmf protein_coding processed_transcript MGP_WSBEiJ_T0055758.1 MGP_WSBEiJ_G0025567.1 mouse_genomes_project 2 120518706 120520550 - Bmf protein_coding processed_transcript MGP_WSBEiJ_T0055759.1 MGP_WSBEiJ_G0025567.1 mouse_genomes_project 2 120518758 120521133 - Bmf protein_coding processed_transcript MGP_WSBEiJ_T0055760.1 MGP_WSBEiJ_G0025567.1 mouse_genomes_project 2 120520431 120523213 - Bmf protein_coding processed_transcript MGP_WSBEiJ_T0099408.1 MGP_WSBEiJ_G0038071.1 mouse_genomes_project 2 171410473 171410562 + Gm23201 snoRNA snoRNA MGP_WSBEiJ_T0056307.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127482437 127486843 - Myef2 protein_coding processed_transcript MGP_WSBEiJ_T0056308.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127484080 127525202 - MGP_WSBEiJ_P0056308 Myef2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056309.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127484377 127525233 - MGP_WSBEiJ_P0056309 Myef2 protein_coding protein_coding MGP_WSBEiJ_T0056310.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127485550 127525230 - MGP_WSBEiJ_P0056310 Myef2 protein_coding protein_coding MGP_WSBEiJ_T0056311.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127485551 127525267 - MGP_WSBEiJ_P0056311 Myef2 protein_coding protein_coding MGP_WSBEiJ_T0056312.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127485551 127525268 - MGP_WSBEiJ_P0056312 Myef2 protein_coding protein_coding MGP_WSBEiJ_T0056313.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127486665 127518480 - MGP_WSBEiJ_P0056313 Myef2 protein_coding protein_coding MGP_WSBEiJ_T0056314.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127495030 127525021 - MGP_WSBEiJ_P0056314 Myef2 protein_coding protein_coding MGP_WSBEiJ_T0056315.1 MGP_WSBEiJ_G0025677.1 mouse_genomes_project 2 127498965 127525182 - Myef2 protein_coding retained_intron MGP_WSBEiJ_T0007093.1 MGP_WSBEiJ_G0005819.1 mouse_genomes_project 2 50107868 50108349 + Gm28639 lincRNA lincRNA MGP_WSBEiJ_T0056885.1 MGP_WSBEiJ_G0025810.1 mouse_genomes_project 2 138917477 138924727 + MGP_WSBEiJ_P0056885 Lamp5 protein_coding protein_coding MGP_WSBEiJ_T0056886.1 MGP_WSBEiJ_G0025810.1 mouse_genomes_project 2 138923114 138935724 + MGP_WSBEiJ_P0056886 Lamp5 protein_coding protein_coding MGP_WSBEiJ_T0056887.1 MGP_WSBEiJ_G0025810.1 mouse_genomes_project 2 138923439 138926691 + Lamp5 protein_coding retained_intron MGP_WSBEiJ_T0056888.1 MGP_WSBEiJ_G0025810.1 mouse_genomes_project 2 138923439 138924410 + Lamp5 protein_coding processed_transcript MGP_WSBEiJ_T0056889.1 MGP_WSBEiJ_G0025810.1 mouse_genomes_project 2 138924626 138935712 + Lamp5 protein_coding processed_transcript MGP_WSBEiJ_T0010270.1 MGP_WSBEiJ_G0008427.1 mouse_genomes_project 2 94305013 94305092 - Mir7001 miRNA miRNA MGP_WSBEiJ_T0013462.1 MGP_WSBEiJ_G0011592.1 mouse_genomes_project 2 159178753 159179079 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017286.1 MGP_WSBEiJ_G0014895.1 mouse_genomes_project 2 134502104 134535237 - 5330413P13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017287.1 MGP_WSBEiJ_G0014895.1 mouse_genomes_project 2 134531200 134535242 - 5330413P13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017288.1 MGP_WSBEiJ_G0014895.1 mouse_genomes_project 2 134531417 134535205 - 5330413P13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0013318.1 MGP_WSBEiJ_G0011448.1 mouse_genomes_project 2 99308972 99309144 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098129.1 MGP_WSBEiJ_G0036792.1 mouse_genomes_project 2 138892673 138892774 - Gm26227 snRNA snRNA MGP_WSBEiJ_T0056032.1 MGP_WSBEiJ_G0025623.1 mouse_genomes_project 2 122717474 122768528 + MGP_WSBEiJ_P0056032 protein_coding protein_coding MGP_WSBEiJ_T0056033.1 MGP_WSBEiJ_G0025623.1 mouse_genomes_project 2 122717572 122803579 + MGP_WSBEiJ_P0056033 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056034.1 MGP_WSBEiJ_G0025623.1 mouse_genomes_project 2 122717572 122805001 + MGP_WSBEiJ_P0056034 protein_coding protein_coding MGP_WSBEiJ_T0056035.1 MGP_WSBEiJ_G0025623.1 mouse_genomes_project 2 122770518 122805001 + MGP_WSBEiJ_P0056035 protein_coding protein_coding MGP_WSBEiJ_T0056036.1 MGP_WSBEiJ_G0025623.1 mouse_genomes_project 2 122787090 122804751 + MGP_WSBEiJ_P0056036 protein_coding protein_coding MGP_WSBEiJ_T0056037.1 MGP_WSBEiJ_G0025623.1 mouse_genomes_project 2 122790341 122822129 + MGP_WSBEiJ_P0056037 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056038.1 MGP_WSBEiJ_G0025623.1 mouse_genomes_project 2 122802632 122804799 + protein_coding retained_intron MGP_WSBEiJ_T0056039.1 MGP_WSBEiJ_G0025623.1 mouse_genomes_project 2 122804186 122819599 + protein_coding processed_transcript MGP_WSBEiJ_T0007274.1 MGP_WSBEiJ_G0005968.1 mouse_genomes_project 2 168695850 168706445 + Gm14317 lincRNA lincRNA MGP_WSBEiJ_T0054857.1 MGP_WSBEiJ_G0025340.1 mouse_genomes_project 2 90025977 90026913 - MGP_WSBEiJ_P0054857 Olfr1225 protein_coding protein_coding MGP_WSBEiJ_T0013322.1 MGP_WSBEiJ_G0011452.1 mouse_genomes_project 2 101450815 101451071 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001050.1 MGP_WSBEiJ_G0000985.1 mouse_genomes_project 2 68471526 68475641 + TEC TEC MGP_WSBEiJ_T0056719.1 MGP_WSBEiJ_G0025775.1 mouse_genomes_project 2 133784489 133804159 + MGP_WSBEiJ_P0056719 Hspa12b protein_coding protein_coding MGP_WSBEiJ_T0056720.1 MGP_WSBEiJ_G0025775.1 mouse_genomes_project 2 133784651 133795416 + MGP_WSBEiJ_P0056720 Hspa12b protein_coding protein_coding MGP_WSBEiJ_T0056721.1 MGP_WSBEiJ_G0025775.1 mouse_genomes_project 2 133784703 133803068 + MGP_WSBEiJ_P0056721 Hspa12b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0007124.1 MGP_WSBEiJ_G0005845.1 mouse_genomes_project 2 73992379 73995023 - lincRNA lincRNA MGP_WSBEiJ_T0056920.1 MGP_WSBEiJ_G0025820.1 mouse_genomes_project 2 142820286 143065035 - MGP_WSBEiJ_P0056920 Tasp1 protein_coding protein_coding MGP_WSBEiJ_T0056921.1 MGP_WSBEiJ_G0025820.1 mouse_genomes_project 2 142820286 143065010 - MGP_WSBEiJ_P0056921 Tasp1 protein_coding protein_coding MGP_WSBEiJ_T0056922.1 MGP_WSBEiJ_G0025820.1 mouse_genomes_project 2 142820286 143065055 - MGP_WSBEiJ_P0056922 Tasp1 protein_coding protein_coding MGP_WSBEiJ_T0056923.1 MGP_WSBEiJ_G0025820.1 mouse_genomes_project 2 142967663 143038687 - Tasp1 protein_coding retained_intron MGP_WSBEiJ_T0007122.1 MGP_WSBEiJ_G0005843.1 mouse_genomes_project 2 73322345 73340427 + Gm13708 lincRNA lincRNA MGP_WSBEiJ_T0013101.1 MGP_WSBEiJ_G0011231.1 mouse_genomes_project 2 16143085 16143158 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057759.1 MGP_WSBEiJ_G0026022.1 mouse_genomes_project 2 160764327 160778876 - MGP_WSBEiJ_P0057759 Dsn1 protein_coding protein_coding MGP_WSBEiJ_T0057760.1 MGP_WSBEiJ_G0026022.1 mouse_genomes_project 2 160764339 160778955 - MGP_WSBEiJ_P0057760 Dsn1 protein_coding protein_coding MGP_WSBEiJ_T0057761.1 MGP_WSBEiJ_G0026022.1 mouse_genomes_project 2 160767519 160778831 - MGP_WSBEiJ_P0057761 Dsn1 protein_coding protein_coding MGP_WSBEiJ_T0057762.1 MGP_WSBEiJ_G0026022.1 mouse_genomes_project 2 160771480 160775057 - Dsn1 protein_coding retained_intron MGP_WSBEiJ_T0057763.1 MGP_WSBEiJ_G0026022.1 mouse_genomes_project 2 160772532 160778102 - MGP_WSBEiJ_P0057763 Dsn1 protein_coding protein_coding MGP_WSBEiJ_T0057764.1 MGP_WSBEiJ_G0026022.1 mouse_genomes_project 2 160777120 160778375 - MGP_WSBEiJ_P0057764 Dsn1 protein_coding protein_coding MGP_WSBEiJ_T0057848.1 MGP_WSBEiJ_G0026039.1 mouse_genomes_project 2 162038704 162085568 - MGP_WSBEiJ_P0057848 D630003M21Rik protein_coding protein_coding MGP_WSBEiJ_T0057849.1 MGP_WSBEiJ_G0026039.1 mouse_genomes_project 2 162042352 162085568 - MGP_WSBEiJ_P0057849 D630003M21Rik protein_coding protein_coding MGP_WSBEiJ_T0057850.1 MGP_WSBEiJ_G0026039.1 mouse_genomes_project 2 162051943 162085568 - MGP_WSBEiJ_P0057850 D630003M21Rik protein_coding protein_coding MGP_WSBEiJ_T0056095.1 MGP_WSBEiJ_G0025634.1 mouse_genomes_project 2 123258610 123268946 - MGP_WSBEiJ_P0056095 Zscan29 protein_coding protein_coding MGP_WSBEiJ_T0056096.1 MGP_WSBEiJ_G0025634.1 mouse_genomes_project 2 123258610 123268924 - MGP_WSBEiJ_P0056096 Zscan29 protein_coding protein_coding MGP_WSBEiJ_T0056097.1 MGP_WSBEiJ_G0025634.1 mouse_genomes_project 2 123259396 123262335 - Zscan29 protein_coding retained_intron MGP_WSBEiJ_T0013325.1 MGP_WSBEiJ_G0011455.1 mouse_genomes_project 2 102786171 102786382 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007020.1 MGP_WSBEiJ_G0005764.1 mouse_genomes_project 2 3261326 3268628 + Gm10857 lincRNA lincRNA MGP_WSBEiJ_T0007021.1 MGP_WSBEiJ_G0005764.1 mouse_genomes_project 2 3261340 3268573 + Gm10857 lincRNA lincRNA MGP_WSBEiJ_T0013187.1 MGP_WSBEiJ_G0011317.1 mouse_genomes_project 2 50526713 50526948 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052485.1 MGP_WSBEiJ_G0024781.1 mouse_genomes_project 2 25403001 25408421 + Wdr5 protein_coding processed_transcript MGP_WSBEiJ_T0052486.1 MGP_WSBEiJ_G0024781.1 mouse_genomes_project 2 25403001 25426558 + MGP_WSBEiJ_P0052486 Wdr5 protein_coding protein_coding MGP_WSBEiJ_T0052487.1 MGP_WSBEiJ_G0024781.1 mouse_genomes_project 2 25407528 25423426 + MGP_WSBEiJ_P0052487 Wdr5 protein_coding protein_coding MGP_WSBEiJ_T0052488.1 MGP_WSBEiJ_G0024781.1 mouse_genomes_project 2 25416737 25421739 + Wdr5 protein_coding processed_transcript MGP_WSBEiJ_T0054645.1 MGP_WSBEiJ_G0025176.1 mouse_genomes_project 2 85285998 85300809 - MGP_WSBEiJ_P0054645 Rtn4rl2 protein_coding protein_coding MGP_WSBEiJ_T0054646.1 MGP_WSBEiJ_G0025176.1 mouse_genomes_project 2 85286020 85300791 - MGP_WSBEiJ_P0054646 Rtn4rl2 protein_coding protein_coding MGP_WSBEiJ_T0054647.1 MGP_WSBEiJ_G0025176.1 mouse_genomes_project 2 85294595 85300575 - Rtn4rl2 protein_coding processed_transcript MGP_WSBEiJ_T0055616.1 MGP_WSBEiJ_G0025521.1 mouse_genomes_project 2 113360297 113361236 - MGP_WSBEiJ_P0055616 protein_coding protein_coding MGP_WSBEiJ_T0055500.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107099065 107128901 + MGP_WSBEiJ_P0055500 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055501.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107099065 107128901 + MGP_WSBEiJ_P0055501 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055502.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107099085 107127999 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055503.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107099100 107114677 + MGP_WSBEiJ_P0055503 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055504.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107102025 107128779 + MGP_WSBEiJ_P0055504 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055505.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107104057 107105974 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055506.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107105206 107106060 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055507.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107105288 107105920 + Pax6 protein_coding retained_intron MGP_WSBEiJ_T0055508.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107105288 107128779 + MGP_WSBEiJ_P0055508 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055509.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107105530 107128881 + MGP_WSBEiJ_P0055509 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055510.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107105610 107128898 + MGP_WSBEiJ_P0055510 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055511.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107105624 107128608 + MGP_WSBEiJ_P0055511 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055512.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107106215 107128608 + MGP_WSBEiJ_P0055512 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055513.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107106216 107128898 + MGP_WSBEiJ_P0055513 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055514.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107108448 107116602 + MGP_WSBEiJ_P0055514 Pax6 protein_coding protein_coding MGP_WSBEiJ_T0055515.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107109924 107123763 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055516.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107112546 107115789 + Pax6 protein_coding retained_intron MGP_WSBEiJ_T0055517.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107113297 107123774 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055518.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107113342 107123806 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055519.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107113369 107127890 + Pax6 protein_coding retained_intron MGP_WSBEiJ_T0055520.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107113371 107123265 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055521.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107113381 107123784 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055522.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107113471 107123236 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055523.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107114560 107115750 + Pax6 protein_coding retained_intron MGP_WSBEiJ_T0055524.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107116128 107128901 + Pax6 protein_coding processed_transcript MGP_WSBEiJ_T0055525.1 MGP_WSBEiJ_G0025482.1 mouse_genomes_project 2 107124023 107124666 + Pax6 protein_coding retained_intron MGP_WSBEiJ_T0017258.1 MGP_WSBEiJ_G0014883.1 mouse_genomes_project 2 122933334 122949302 + AV039307 processed_transcript processed_transcript MGP_WSBEiJ_T0017259.1 MGP_WSBEiJ_G0014883.1 mouse_genomes_project 2 122933346 122949436 + AV039307 processed_transcript processed_transcript MGP_WSBEiJ_T0017260.1 MGP_WSBEiJ_G0014883.1 mouse_genomes_project 2 122948979 122949303 + AV039307 processed_transcript processed_transcript MGP_WSBEiJ_T0055879.1 MGP_WSBEiJ_G0025600.1 mouse_genomes_project 2 121715311 121779855 + MGP_WSBEiJ_P0055879 Rtf1 protein_coding protein_coding MGP_WSBEiJ_T0055880.1 MGP_WSBEiJ_G0025600.1 mouse_genomes_project 2 121715340 121734754 + Rtf1 protein_coding processed_transcript MGP_WSBEiJ_T0055881.1 MGP_WSBEiJ_G0025600.1 mouse_genomes_project 2 121753377 121754718 + Rtf1 protein_coding retained_intron MGP_WSBEiJ_T0055882.1 MGP_WSBEiJ_G0025600.1 mouse_genomes_project 2 121771136 121772099 + Rtf1 protein_coding retained_intron MGP_WSBEiJ_T0057295.1 MGP_WSBEiJ_G0025930.1 mouse_genomes_project 2 156450983 156452294 - MGP_WSBEiJ_P0057295 Foxs1 protein_coding protein_coding MGP_WSBEiJ_T0013090.1 MGP_WSBEiJ_G0011220.1 mouse_genomes_project 2 12884535 12885505 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013087.1 MGP_WSBEiJ_G0011217.1 mouse_genomes_project 2 12208748 12209738 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017198.1 MGP_WSBEiJ_G0014850.1 mouse_genomes_project 2 74569458 74580190 + Gm28309 processed_transcript processed_transcript MGP_WSBEiJ_T0007230.1 MGP_WSBEiJ_G0005930.1 mouse_genomes_project 2 138667623 138668622 - Gm14210 lincRNA lincRNA MGP_WSBEiJ_T0003815.1 MGP_WSBEiJ_G0003413.1 mouse_genomes_project 2 3000621 3006252 + Gm13267 antisense antisense MGP_WSBEiJ_T0003816.1 MGP_WSBEiJ_G0003413.1 mouse_genomes_project 2 3000711 3005017 + Gm13267 antisense antisense MGP_WSBEiJ_T0055473.1 MGP_WSBEiJ_G0025473.1 mouse_genomes_project 2 106101984 106124785 - MGP_WSBEiJ_P0055473 Depdc7 protein_coding protein_coding MGP_WSBEiJ_T0055474.1 MGP_WSBEiJ_G0025473.1 mouse_genomes_project 2 106102775 106103350 - Depdc7 protein_coding retained_intron MGP_WSBEiJ_T0007275.1 MGP_WSBEiJ_G0005969.1 mouse_genomes_project 2 169835911 169836236 - Gm28163 lincRNA lincRNA MGP_WSBEiJ_T0055552.1 MGP_WSBEiJ_G0025491.1 mouse_genomes_project 2 110847727 110913253 + MGP_WSBEiJ_P0055552 Kif18a protein_coding protein_coding MGP_WSBEiJ_T0055553.1 MGP_WSBEiJ_G0025491.1 mouse_genomes_project 2 110847815 110863097 + Kif18a protein_coding retained_intron MGP_WSBEiJ_T0055554.1 MGP_WSBEiJ_G0025491.1 mouse_genomes_project 2 110847829 110876386 + Kif18a protein_coding retained_intron MGP_WSBEiJ_T0055555.1 MGP_WSBEiJ_G0025491.1 mouse_genomes_project 2 110847841 110879719 + Kif18a protein_coding retained_intron MGP_WSBEiJ_T0055556.1 MGP_WSBEiJ_G0025491.1 mouse_genomes_project 2 110847858 110862782 + Kif18a protein_coding retained_intron MGP_WSBEiJ_T0055557.1 MGP_WSBEiJ_G0025491.1 mouse_genomes_project 2 110859012 110863097 + Kif18a protein_coding retained_intron MGP_WSBEiJ_T0001057.1 MGP_WSBEiJ_G0000992.1 mouse_genomes_project 2 79197099 79333219 + TEC TEC MGP_WSBEiJ_T0098136.1 MGP_WSBEiJ_G0036799.1 mouse_genomes_project 2 166854504 166854662 - Gm24478 snRNA snRNA MGP_WSBEiJ_T0017299.1 MGP_WSBEiJ_G0014903.1 mouse_genomes_project 2 160455758 160464596 - 4930405A21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017300.1 MGP_WSBEiJ_G0014903.1 mouse_genomes_project 2 160457170 160464513 - 4930405A21Rik processed_transcript retained_intron MGP_WSBEiJ_T0007252.1 MGP_WSBEiJ_G0005949.1 mouse_genomes_project 2 158396328 158397628 - Gm14216 lincRNA lincRNA MGP_WSBEiJ_T0007253.1 MGP_WSBEiJ_G0005949.1 mouse_genomes_project 2 158396346 158413057 - Gm14216 lincRNA lincRNA MGP_WSBEiJ_T0055610.1 MGP_WSBEiJ_G0025515.1 mouse_genomes_project 2 113149653 113150266 + MGP_WSBEiJ_P0055610 protein_coding protein_coding MGP_WSBEiJ_T0013081.1 MGP_WSBEiJ_G0011211.1 mouse_genomes_project 2 8748404 8749403 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010182.1 MGP_WSBEiJ_G0008339.1 mouse_genomes_project 2 7815003 7817926 + miRNA miRNA MGP_WSBEiJ_T0003931.1 MGP_WSBEiJ_G0003503.1 mouse_genomes_project 2 73229963 73238366 + Gm13709 antisense antisense MGP_WSBEiJ_T0051982.1 MGP_WSBEiJ_G0024685.1 mouse_genomes_project 2 22814947 22816759 + Entpd8 protein_coding retained_intron MGP_WSBEiJ_T0051983.1 MGP_WSBEiJ_G0024685.1 mouse_genomes_project 2 22814965 22820360 + MGP_WSBEiJ_P0051983 Entpd8 protein_coding protein_coding MGP_WSBEiJ_T0051984.1 MGP_WSBEiJ_G0024685.1 mouse_genomes_project 2 22814968 22820360 + MGP_WSBEiJ_P0051984 Entpd8 protein_coding protein_coding MGP_WSBEiJ_T0051985.1 MGP_WSBEiJ_G0024685.1 mouse_genomes_project 2 22815152 22820359 + Entpd8 protein_coding retained_intron MGP_WSBEiJ_T0051986.1 MGP_WSBEiJ_G0024685.1 mouse_genomes_project 2 22816454 22819796 + Entpd8 protein_coding retained_intron MGP_WSBEiJ_T0051987.1 MGP_WSBEiJ_G0024685.1 mouse_genomes_project 2 22816461 22820360 + MGP_WSBEiJ_P0051987 Entpd8 protein_coding protein_coding MGP_WSBEiJ_T0051988.1 MGP_WSBEiJ_G0024685.1 mouse_genomes_project 2 22816676 22818378 + MGP_WSBEiJ_P0051988 Entpd8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051989.1 MGP_WSBEiJ_G0024685.1 mouse_genomes_project 2 22819320 22820218 + Entpd8 protein_coding retained_intron MGP_WSBEiJ_T0054773.1 MGP_WSBEiJ_G0025271.1 mouse_genomes_project 2 88110348 88111305 + MGP_WSBEiJ_P0054773 Olfr1124 protein_coding protein_coding MGP_WSBEiJ_T0051996.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22936814 22949613 - MGP_WSBEiJ_P0051996 Nelfb protein_coding protein_coding MGP_WSBEiJ_T0051997.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22936815 22949613 - MGP_WSBEiJ_P0051997 Nelfb protein_coding protein_coding MGP_WSBEiJ_T0051998.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22936818 22949505 - Nelfb protein_coding retained_intron MGP_WSBEiJ_T0051999.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22937140 22941916 - Nelfb protein_coding retained_intron MGP_WSBEiJ_T0052000.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22937787 22942044 - MGP_WSBEiJ_P0052000 Nelfb protein_coding protein_coding MGP_WSBEiJ_T0052001.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22938256 22941724 - Nelfb protein_coding retained_intron MGP_WSBEiJ_T0052002.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22942013 22948850 - MGP_WSBEiJ_P0052002 Nelfb protein_coding protein_coding MGP_WSBEiJ_T0052003.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22942073 22948198 - Nelfb protein_coding processed_transcript MGP_WSBEiJ_T0052004.1 MGP_WSBEiJ_G0024689.1 mouse_genomes_project 2 22943289 22948824 - Nelfb protein_coding retained_intron MGP_WSBEiJ_T0017180.1 MGP_WSBEiJ_G0014837.1 mouse_genomes_project 2 37145147 37149161 + Gm13587 processed_transcript processed_transcript MGP_WSBEiJ_T0054885.1 MGP_WSBEiJ_G0025360.1 mouse_genomes_project 2 90550661 90551736 - MGP_WSBEiJ_P0054885 protein_coding protein_coding MGP_WSBEiJ_T0053138.1 MGP_WSBEiJ_G0024881.1 mouse_genomes_project 2 30916683 30952227 + MGP_WSBEiJ_P0053138 Eng protein_coding protein_coding MGP_WSBEiJ_T0053139.1 MGP_WSBEiJ_G0024881.1 mouse_genomes_project 2 30916683 30952767 + MGP_WSBEiJ_P0053139 Eng protein_coding protein_coding MGP_WSBEiJ_T0053140.1 MGP_WSBEiJ_G0024881.1 mouse_genomes_project 2 30916710 30952778 + MGP_WSBEiJ_P0053140 Eng protein_coding protein_coding MGP_WSBEiJ_T0053141.1 MGP_WSBEiJ_G0024881.1 mouse_genomes_project 2 30917081 30920487 + Eng protein_coding processed_transcript MGP_WSBEiJ_T0053142.1 MGP_WSBEiJ_G0024881.1 mouse_genomes_project 2 30942921 30943824 + Eng protein_coding retained_intron MGP_WSBEiJ_T0053143.1 MGP_WSBEiJ_G0024881.1 mouse_genomes_project 2 30943444 30951364 + MGP_WSBEiJ_P0053143 Eng protein_coding protein_coding MGP_WSBEiJ_T0001002.1 MGP_WSBEiJ_G0000937.1 mouse_genomes_project 2 9018311 9018733 + TEC TEC MGP_WSBEiJ_T0004023.1 MGP_WSBEiJ_G0003564.1 mouse_genomes_project 2 144294738 144300453 - Macrod2os2 antisense antisense MGP_WSBEiJ_T0004025.1 MGP_WSBEiJ_G0003564.1 mouse_genomes_project 2 144297053 144297440 - Macrod2os2 antisense antisense MGP_WSBEiJ_T0100694.1 MGP_WSBEiJ_G0039152.1 mouse_genomes_project 2 37469910 37473189 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0054049.1 MGP_WSBEiJ_G0025053.1 mouse_genomes_project 2 67076768 67336232 + B3galt1 protein_coding processed_transcript MGP_WSBEiJ_T0054050.1 MGP_WSBEiJ_G0025053.1 mouse_genomes_project 2 67273281 67662546 + MGP_WSBEiJ_P0054050 B3galt1 protein_coding protein_coding MGP_WSBEiJ_T0054051.1 MGP_WSBEiJ_G0025053.1 mouse_genomes_project 2 67650972 67664909 + MGP_WSBEiJ_P0054051 B3galt1 protein_coding protein_coding MGP_WSBEiJ_T0054052.1 MGP_WSBEiJ_G0025053.1 mouse_genomes_project 2 67662108 67667075 + MGP_WSBEiJ_P0054052 B3galt1 protein_coding protein_coding MGP_WSBEiJ_T0052422.1 MGP_WSBEiJ_G0024769.1 mouse_genomes_project 2 24804777 24813860 + MGP_WSBEiJ_P0052422 Stkld1 protein_coding protein_coding MGP_WSBEiJ_T0052423.1 MGP_WSBEiJ_G0024769.1 mouse_genomes_project 2 24804799 24825565 + MGP_WSBEiJ_P0052423 Stkld1 protein_coding protein_coding MGP_WSBEiJ_T0052424.1 MGP_WSBEiJ_G0024769.1 mouse_genomes_project 2 24806053 24825460 + MGP_WSBEiJ_P0052424 Stkld1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0003847.1 MGP_WSBEiJ_G0003438.1 mouse_genomes_project 2 23566895 23569930 + antisense antisense MGP_WSBEiJ_T0056167.1 MGP_WSBEiJ_G0025641.1 mouse_genomes_project 2 123491342 123514563 - MGP_WSBEiJ_P0056167 Catsper2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056168.1 MGP_WSBEiJ_G0025641.1 mouse_genomes_project 2 123492354 123514394 - MGP_WSBEiJ_P0056168 Catsper2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056169.1 MGP_WSBEiJ_G0025641.1 mouse_genomes_project 2 123492357 123514554 - MGP_WSBEiJ_P0056169 Catsper2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056170.1 MGP_WSBEiJ_G0025641.1 mouse_genomes_project 2 123494079 123514577 - MGP_WSBEiJ_P0056170 Catsper2 protein_coding protein_coding MGP_WSBEiJ_T0056171.1 MGP_WSBEiJ_G0025641.1 mouse_genomes_project 2 123494081 123498264 - Catsper2 protein_coding retained_intron MGP_WSBEiJ_T0056172.1 MGP_WSBEiJ_G0025641.1 mouse_genomes_project 2 123511057 123513083 - Catsper2 protein_coding retained_intron MGP_WSBEiJ_T0056420.1 MGP_WSBEiJ_G0025703.1 mouse_genomes_project 2 129571539 129600902 - MGP_WSBEiJ_P0056420 Ncaph protein_coding protein_coding MGP_WSBEiJ_T0056421.1 MGP_WSBEiJ_G0025703.1 mouse_genomes_project 2 129571557 129582383 - Ncaph protein_coding retained_intron MGP_WSBEiJ_T0056422.1 MGP_WSBEiJ_G0025703.1 mouse_genomes_project 2 129571680 129600850 - MGP_WSBEiJ_P0056422 Ncaph protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056423.1 MGP_WSBEiJ_G0025703.1 mouse_genomes_project 2 129576308 129584603 - Ncaph protein_coding retained_intron MGP_WSBEiJ_T0056424.1 MGP_WSBEiJ_G0025703.1 mouse_genomes_project 2 129587877 129589015 - Ncaph protein_coding retained_intron MGP_WSBEiJ_T0056425.1 MGP_WSBEiJ_G0025703.1 mouse_genomes_project 2 129594616 129600845 - Ncaph protein_coding processed_transcript MGP_WSBEiJ_T0055476.1 MGP_WSBEiJ_G0025475.1 mouse_genomes_project 2 106218548 106235677 - MGP_WSBEiJ_P0055476 Prrg4 protein_coding protein_coding MGP_WSBEiJ_T0055477.1 MGP_WSBEiJ_G0025475.1 mouse_genomes_project 2 106224579 106235289 - MGP_WSBEiJ_P0055477 Prrg4 protein_coding protein_coding MGP_WSBEiJ_T0055655.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114353126 114374538 - Ryr3 protein_coding processed_transcript MGP_WSBEiJ_T0055656.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114353135 114938154 - MGP_WSBEiJ_P0055656 Ryr3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055657.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114353151 114757215 - MGP_WSBEiJ_P0055657 Ryr3 protein_coding protein_coding MGP_WSBEiJ_T0055658.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114353151 114938215 - MGP_WSBEiJ_P0055658 Ryr3 protein_coding protein_coding MGP_WSBEiJ_T0055659.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114353817 114938232 - Ryr3 protein_coding processed_transcript MGP_WSBEiJ_T0055660.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114358385 114362308 - Ryr3 protein_coding processed_transcript MGP_WSBEiJ_T0055661.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114587137 114636052 - Ryr3 protein_coding retained_intron MGP_WSBEiJ_T0055662.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114691077 114938226 - Ryr3 protein_coding retained_intron MGP_WSBEiJ_T0055663.1 MGP_WSBEiJ_G0025545.1 mouse_genomes_project 2 114721911 114938260 - Ryr3 protein_coding retained_intron MGP_WSBEiJ_T0010269.1 MGP_WSBEiJ_G0008426.1 mouse_genomes_project 2 93432134 93432209 + Mir7222 miRNA miRNA MGP_WSBEiJ_T0055923.1 MGP_WSBEiJ_G0025606.1 mouse_genomes_project 2 122042077 122098420 + MGP_WSBEiJ_P0055923 Mapkbp1 protein_coding protein_coding MGP_WSBEiJ_T0055924.1 MGP_WSBEiJ_G0025606.1 mouse_genomes_project 2 122042432 122098414 + MGP_WSBEiJ_P0055924 Mapkbp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055925.1 MGP_WSBEiJ_G0025606.1 mouse_genomes_project 2 122082503 122083912 + Mapkbp1 protein_coding retained_intron MGP_WSBEiJ_T0055926.1 MGP_WSBEiJ_G0025606.1 mouse_genomes_project 2 122083860 122086459 + Mapkbp1 protein_coding retained_intron MGP_WSBEiJ_T0055927.1 MGP_WSBEiJ_G0025606.1 mouse_genomes_project 2 122093089 122094063 + Mapkbp1 protein_coding retained_intron MGP_WSBEiJ_T0051592.1 MGP_WSBEiJ_G0024618.1 mouse_genomes_project 2 10308533 10384463 + MGP_WSBEiJ_P0051592 Pter protein_coding protein_coding MGP_WSBEiJ_T0051593.1 MGP_WSBEiJ_G0024618.1 mouse_genomes_project 2 10308554 10361736 + Pter protein_coding processed_transcript MGP_WSBEiJ_T0051594.1 MGP_WSBEiJ_G0024618.1 mouse_genomes_project 2 10308561 10384464 + MGP_WSBEiJ_P0051594 Pter protein_coding protein_coding MGP_WSBEiJ_T0051595.1 MGP_WSBEiJ_G0024618.1 mouse_genomes_project 2 10308584 10386938 + MGP_WSBEiJ_P0051595 Pter protein_coding protein_coding MGP_WSBEiJ_T0051596.1 MGP_WSBEiJ_G0024618.1 mouse_genomes_project 2 10308592 10385097 + MGP_WSBEiJ_P0051596 Pter protein_coding protein_coding MGP_WSBEiJ_T0051597.1 MGP_WSBEiJ_G0024618.1 mouse_genomes_project 2 10308593 10363121 + Pter protein_coding processed_transcript MGP_WSBEiJ_T0051598.1 MGP_WSBEiJ_G0024618.1 mouse_genomes_project 2 10359141 10385342 + Pter protein_coding retained_intron MGP_WSBEiJ_T0011290.1 MGP_WSBEiJ_G0009447.1 mouse_genomes_project 2 18866761 18866938 - Gm23007 misc_RNA misc_RNA MGP_WSBEiJ_T0052431.1 MGP_WSBEiJ_G0024771.1 mouse_genomes_project 2 24846361 24871349 + MGP_WSBEiJ_P0052431 Adamts13 protein_coding protein_coding MGP_WSBEiJ_T0052432.1 MGP_WSBEiJ_G0024771.1 mouse_genomes_project 2 24846438 24877440 + MGP_WSBEiJ_P0052432 Adamts13 protein_coding protein_coding MGP_WSBEiJ_T0052433.1 MGP_WSBEiJ_G0024771.1 mouse_genomes_project 2 24873518 24877257 + Adamts13 protein_coding processed_transcript MGP_WSBEiJ_T0017314.1 MGP_WSBEiJ_G0014907.1 mouse_genomes_project 2 162466482 162481576 - Gm14204 processed_transcript processed_transcript MGP_WSBEiJ_T0017315.1 MGP_WSBEiJ_G0014907.1 mouse_genomes_project 2 162469185 162481640 - Gm14204 processed_transcript processed_transcript MGP_WSBEiJ_T0017316.1 MGP_WSBEiJ_G0014907.1 mouse_genomes_project 2 162474047 162481523 - Gm14204 processed_transcript processed_transcript MGP_WSBEiJ_T0017317.1 MGP_WSBEiJ_G0014907.1 mouse_genomes_project 2 162474186 162481507 - Gm14204 processed_transcript processed_transcript MGP_WSBEiJ_T0007265.1 MGP_WSBEiJ_G0005959.1 mouse_genomes_project 2 163960108 163985332 + 9130015L21Rik lincRNA lincRNA MGP_WSBEiJ_T0007310.1 MGP_WSBEiJ_G0005998.1 mouse_genomes_project 2 175913396 175992405 + Gm14266 lincRNA lincRNA MGP_WSBEiJ_T0007313.1 MGP_WSBEiJ_G0005998.1 mouse_genomes_project 2 175976490 175994557 + Gm14266 lincRNA lincRNA MGP_WSBEiJ_T0013354.1 MGP_WSBEiJ_G0011484.1 mouse_genomes_project 2 111806941 111807926 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057020.1 MGP_WSBEiJ_G0025843.1 mouse_genomes_project 2 147779533 147780847 + MGP_WSBEiJ_P0057020 Gm561 protein_coding protein_coding MGP_WSBEiJ_T0098091.1 MGP_WSBEiJ_G0036754.1 mouse_genomes_project 2 23085024 23085119 + Gm25220 snRNA snRNA MGP_WSBEiJ_T0010201.1 MGP_WSBEiJ_G0008358.1 mouse_genomes_project 2 7829118 7829214 + Mir669o miRNA miRNA MGP_WSBEiJ_T0003957.1 MGP_WSBEiJ_G0003521.1 mouse_genomes_project 2 103293179 103296756 + Gm13920 antisense antisense MGP_WSBEiJ_T0013166.1 MGP_WSBEiJ_G0011296.1 mouse_genomes_project 2 39457997 39458958 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013314.1 MGP_WSBEiJ_G0011444.1 mouse_genomes_project 2 96570818 96570957 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057337.1 MGP_WSBEiJ_G0025940.1 mouse_genomes_project 2 156769198 156798802 + MGP_WSBEiJ_P0057337 Pofut1 protein_coding protein_coding MGP_WSBEiJ_T0057338.1 MGP_WSBEiJ_G0025940.1 mouse_genomes_project 2 156769206 156794471 + MGP_WSBEiJ_P0057338 Pofut1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057339.1 MGP_WSBEiJ_G0025940.1 mouse_genomes_project 2 156769206 156794471 + MGP_WSBEiJ_P0057339 Pofut1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057340.1 MGP_WSBEiJ_G0025940.1 mouse_genomes_project 2 156769216 156790499 + MGP_WSBEiJ_P0057340 Pofut1 protein_coding protein_coding MGP_WSBEiJ_T0057341.1 MGP_WSBEiJ_G0025940.1 mouse_genomes_project 2 156769234 156779187 + Pofut1 protein_coding retained_intron MGP_WSBEiJ_T0057342.1 MGP_WSBEiJ_G0025940.1 mouse_genomes_project 2 156769243 156795058 + MGP_WSBEiJ_P0057342 Pofut1 protein_coding protein_coding MGP_WSBEiJ_T0057343.1 MGP_WSBEiJ_G0025940.1 mouse_genomes_project 2 156786096 156795841 + MGP_WSBEiJ_P0057343 Pofut1 protein_coding protein_coding MGP_WSBEiJ_T0057344.1 MGP_WSBEiJ_G0025940.1 mouse_genomes_project 2 156786186 156796618 + MGP_WSBEiJ_P0057344 Pofut1 protein_coding protein_coding MGP_WSBEiJ_T0003819.1 MGP_WSBEiJ_G0003416.1 mouse_genomes_project 2 4031542 4034171 + Gm13389 antisense antisense MGP_WSBEiJ_T0010288.1 MGP_WSBEiJ_G0008445.1 mouse_genomes_project 2 131482603 131482717 - Gm22859 miRNA miRNA MGP_WSBEiJ_T0010310.1 MGP_WSBEiJ_G0008467.1 mouse_genomes_project 2 170174833 170174938 - Gm22692 miRNA miRNA MGP_WSBEiJ_T0056322.1 MGP_WSBEiJ_G0025681.1 mouse_genomes_project 2 127653769 127667239 + MGP_WSBEiJ_P0056322 Dut protein_coding protein_coding MGP_WSBEiJ_T0056323.1 MGP_WSBEiJ_G0025681.1 mouse_genomes_project 2 127655330 127668099 + MGP_WSBEiJ_P0056323 Dut protein_coding protein_coding MGP_WSBEiJ_T0056324.1 MGP_WSBEiJ_G0025681.1 mouse_genomes_project 2 127655748 127656877 + Dut protein_coding processed_transcript MGP_WSBEiJ_T0055617.1 MGP_WSBEiJ_G0025522.1 mouse_genomes_project 2 113381034 113381973 + MGP_WSBEiJ_P0055617 protein_coding protein_coding MGP_WSBEiJ_T0100688.1 MGP_WSBEiJ_G0039146.1 mouse_genomes_project 2 34789199 34790138 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001052.1 MGP_WSBEiJ_G0000987.1 mouse_genomes_project 2 68552797 68556807 + TEC TEC MGP_WSBEiJ_T0004061.1 MGP_WSBEiJ_G0003596.1 mouse_genomes_project 2 162048207 162051943 + 1700060C20Rik antisense antisense MGP_WSBEiJ_T0054795.1 MGP_WSBEiJ_G0025284.1 mouse_genomes_project 2 88440741 88441677 - MGP_WSBEiJ_P0054795 Olfr1141 protein_coding protein_coding MGP_WSBEiJ_T0057004.1 MGP_WSBEiJ_G0025840.1 mouse_genomes_project 2 147712194 147715132 + Polr3f protein_coding processed_transcript MGP_WSBEiJ_T0057005.1 MGP_WSBEiJ_G0025840.1 mouse_genomes_project 2 147712232 147719117 + Polr3f protein_coding processed_transcript MGP_WSBEiJ_T0057006.1 MGP_WSBEiJ_G0025840.1 mouse_genomes_project 2 147712316 147723117 + MGP_WSBEiJ_P0057006 Polr3f protein_coding protein_coding MGP_WSBEiJ_T0057007.1 MGP_WSBEiJ_G0025840.1 mouse_genomes_project 2 147716768 147723222 + Polr3f protein_coding processed_transcript MGP_WSBEiJ_T0057008.1 MGP_WSBEiJ_G0025840.1 mouse_genomes_project 2 147720367 147721052 + Polr3f protein_coding processed_transcript MGP_WSBEiJ_T0057009.1 MGP_WSBEiJ_G0025840.1 mouse_genomes_project 2 147720602 147723322 + Polr3f protein_coding processed_transcript MGP_WSBEiJ_T0001068.1 MGP_WSBEiJ_G0001002.1 mouse_genomes_project 2 159807211 159808887 - TEC TEC MGP_WSBEiJ_T0010166.1 MGP_WSBEiJ_G0008323.1 mouse_genomes_project 2 7774441 7774562 + Gm22072 miRNA miRNA MGP_WSBEiJ_T0013202.1 MGP_WSBEiJ_G0011332.1 mouse_genomes_project 2 56385001 56387836 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013084.1 MGP_WSBEiJ_G0011214.1 mouse_genomes_project 2 12158718 12160260 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097022.1 MGP_WSBEiJ_G0035703.1 mouse_genomes_project 2 61085388 61085505 + Gm25966 rRNA rRNA MGP_WSBEiJ_T0054432.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77006628 77174015 - MGP_WSBEiJ_P0054432 Ccdc141 protein_coding protein_coding MGP_WSBEiJ_T0054433.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77008222 77174781 - MGP_WSBEiJ_P0054433 Ccdc141 protein_coding unknown_likely_coding MGP_WSBEiJ_T0054434.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77008279 77016725 - MGP_WSBEiJ_P0054434 Ccdc141 protein_coding protein_coding MGP_WSBEiJ_T0054435.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77011865 77019508 - Ccdc141 protein_coding processed_transcript MGP_WSBEiJ_T0054436.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77020201 77027455 - Ccdc141 protein_coding retained_intron MGP_WSBEiJ_T0054437.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77027452 77041936 - Ccdc141 protein_coding retained_intron MGP_WSBEiJ_T0054438.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77027452 77042584 - MGP_WSBEiJ_P0054438 Ccdc141 protein_coding protein_coding MGP_WSBEiJ_T0054439.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77042824 77174016 - Ccdc141 protein_coding retained_intron MGP_WSBEiJ_T0054440.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77075196 77173990 - Ccdc141 protein_coding retained_intron MGP_WSBEiJ_T0054441.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77135573 77173980 - MGP_WSBEiJ_P0054441 Ccdc141 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054442.1 MGP_WSBEiJ_G0025134.1 mouse_genomes_project 2 77165372 77173956 - MGP_WSBEiJ_P0054442 Ccdc141 protein_coding protein_coding MGP_WSBEiJ_T0056237.1 MGP_WSBEiJ_G0025659.1 mouse_genomes_project 2 124353585 124358976 + MGP_WSBEiJ_P0056237 B2m protein_coding protein_coding MGP_WSBEiJ_T0010251.1 MGP_WSBEiJ_G0008408.1 mouse_genomes_project 2 55863981 55864078 + Mir195b miRNA miRNA MGP_WSBEiJ_T0100256.1 MGP_WSBEiJ_G0038788.1 mouse_genomes_project 2 87460646 87461594 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0097025.1 MGP_WSBEiJ_G0035706.1 mouse_genomes_project 2 85106508 85106621 - n-R5s200 rRNA rRNA MGP_WSBEiJ_T0013356.1 MGP_WSBEiJ_G0011486.1 mouse_genomes_project 2 113227536 113228475 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051278.1 MGP_WSBEiJ_G0024571.1 mouse_genomes_project 2 303931 308754 + MGP_WSBEiJ_P0051278 Acbd7 protein_coding protein_coding MGP_WSBEiJ_T0051279.1 MGP_WSBEiJ_G0024571.1 mouse_genomes_project 2 303973 308761 + MGP_WSBEiJ_P0051279 Acbd7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0010305.1 MGP_WSBEiJ_G0008462.1 mouse_genomes_project 2 162512377 162512435 + Mir3474 miRNA miRNA MGP_WSBEiJ_T0055157.1 MGP_WSBEiJ_G0025415.1 mouse_genomes_project 2 92777038 92823946 - MGP_WSBEiJ_P0055157 Creb3l1 protein_coding protein_coding MGP_WSBEiJ_T0013061.1 MGP_WSBEiJ_G0011191.1 mouse_genomes_project 2 677102 678171 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052360.1 MGP_WSBEiJ_G0024758.1 mouse_genomes_project 2 24435483 24488296 + MGP_WSBEiJ_P0052360 Gm20532 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0017257.1 MGP_WSBEiJ_G0014882.1 mouse_genomes_project 2 122314282 122314958 - Gm13997 processed_transcript processed_transcript MGP_WSBEiJ_T0098087.1 MGP_WSBEiJ_G0036750.1 mouse_genomes_project 2 17915649 17915756 + Gm23970 snRNA snRNA MGP_WSBEiJ_T0058227.1 MGP_WSBEiJ_G0026140.1 mouse_genomes_project 2 169576984 169598057 - MGP_WSBEiJ_P0058227 Zfp663 protein_coding protein_coding MGP_WSBEiJ_T0058228.1 MGP_WSBEiJ_G0026140.1 mouse_genomes_project 2 169576985 169587808 - MGP_WSBEiJ_P0058228 Zfp663 protein_coding protein_coding MGP_WSBEiJ_T0058229.1 MGP_WSBEiJ_G0026140.1 mouse_genomes_project 2 169579496 169587073 - Zfp663 protein_coding processed_transcript MGP_WSBEiJ_T0058230.1 MGP_WSBEiJ_G0026140.1 mouse_genomes_project 2 169579729 169598051 - MGP_WSBEiJ_P0058230 Zfp663 protein_coding protein_coding MGP_WSBEiJ_T0013066.1 MGP_WSBEiJ_G0011196.1 mouse_genomes_project 2 1994347 1994572 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057585.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159691043 159727111 - MGP_WSBEiJ_P0057585 6430550D23Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057590.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159719631 159723647 - MGP_WSBEiJ_P0057590 6430550D23Rik protein_coding protein_coding MGP_WSBEiJ_T0057591.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159719798 159727127 - 6430550D23Rik protein_coding retained_intron MGP_WSBEiJ_T0057592.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159721678 159727120 - MGP_WSBEiJ_P0057592 6430550D23Rik protein_coding protein_coding MGP_WSBEiJ_T0057593.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159722362 159727123 - MGP_WSBEiJ_P0057593 6430550D23Rik protein_coding protein_coding MGP_WSBEiJ_T0057594.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159722455 159727181 - MGP_WSBEiJ_P0057594 6430550D23Rik protein_coding protein_coding MGP_WSBEiJ_T0057595.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159722542 159723647 - MGP_WSBEiJ_P0057595 6430550D23Rik protein_coding protein_coding MGP_WSBEiJ_T0057596.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159722585 159723356 - MGP_WSBEiJ_P0057596 6430550D23Rik protein_coding protein_coding MGP_WSBEiJ_T0057597.1 MGP_WSBEiJ_G0026000.1 mouse_genomes_project 2 159722617 159723356 - MGP_WSBEiJ_P0057597 6430550D23Rik protein_coding protein_coding MGP_WSBEiJ_T0057827.1 MGP_WSBEiJ_G0026034.1 mouse_genomes_project 2 161567245 161729938 + MGP_WSBEiJ_P0057827 Ctnnbl1 protein_coding protein_coding MGP_WSBEiJ_T0057828.1 MGP_WSBEiJ_G0026034.1 mouse_genomes_project 2 161622535 161644623 + Ctnnbl1 protein_coding processed_transcript MGP_WSBEiJ_T0057829.1 MGP_WSBEiJ_G0026034.1 mouse_genomes_project 2 161623951 161658077 + Ctnnbl1 protein_coding processed_transcript MGP_WSBEiJ_T0057830.1 MGP_WSBEiJ_G0026034.1 mouse_genomes_project 2 161623984 161674858 + Ctnnbl1 protein_coding processed_transcript MGP_WSBEiJ_T0057401.1 MGP_WSBEiJ_G0025960.1 mouse_genomes_project 2 157867243 157877101 + protein_coding retained_intron MGP_WSBEiJ_T0057402.1 MGP_WSBEiJ_G0025960.1 mouse_genomes_project 2 157867243 157879355 + MGP_WSBEiJ_P0057402 protein_coding protein_coding MGP_WSBEiJ_T0057404.1 MGP_WSBEiJ_G0025960.1 mouse_genomes_project 2 157876652 157879355 + protein_coding processed_transcript MGP_WSBEiJ_T0057147.1 MGP_WSBEiJ_G0025883.1 mouse_genomes_project 2 154172206 154194828 + MGP_WSBEiJ_P0057147 Entpd6 protein_coding protein_coding MGP_WSBEiJ_T0057148.1 MGP_WSBEiJ_G0025883.1 mouse_genomes_project 2 154172245 154186514 + Entpd6 protein_coding retained_intron MGP_WSBEiJ_T0057149.1 MGP_WSBEiJ_G0025883.1 mouse_genomes_project 2 154172256 154186967 + Entpd6 protein_coding processed_transcript MGP_WSBEiJ_T0057150.1 MGP_WSBEiJ_G0025883.1 mouse_genomes_project 2 154172335 154176389 + Entpd6 protein_coding processed_transcript MGP_WSBEiJ_T0058051.1 MGP_WSBEiJ_G0026094.1 mouse_genomes_project 2 168435623 168436846 + MGP_WSBEiJ_P0058051 Svs6 protein_coding protein_coding MGP_WSBEiJ_T0099386.1 MGP_WSBEiJ_G0038049.1 mouse_genomes_project 2 132894467 132894537 + Gm23650 snoRNA snoRNA MGP_WSBEiJ_T0003876.1 MGP_WSBEiJ_G0003461.1 mouse_genomes_project 2 31169635 31171882 - Gm13523 antisense antisense MGP_WSBEiJ_T0054913.1 MGP_WSBEiJ_G0025377.1 mouse_genomes_project 2 90946766 90947681 - MGP_WSBEiJ_P0054913 Olfr1270 protein_coding protein_coding MGP_WSBEiJ_T0056456.1 MGP_WSBEiJ_G0025712.1 mouse_genomes_project 2 129849815 129853819 + MGP_WSBEiJ_P0056456 Adra2b protein_coding protein_coding MGP_WSBEiJ_T0056457.1 MGP_WSBEiJ_G0025712.1 mouse_genomes_project 2 129849893 129853821 + MGP_WSBEiJ_P0056457 Adra2b protein_coding protein_coding MGP_WSBEiJ_T0013411.1 MGP_WSBEiJ_G0011541.1 mouse_genomes_project 2 142352012 142352521 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013309.1 MGP_WSBEiJ_G0011439.1 mouse_genomes_project 2 93731380 93731804 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056458.1 MGP_WSBEiJ_G0025713.1 mouse_genomes_project 2 129914058 129924952 + MGP_WSBEiJ_P0056458 Gpat2 protein_coding protein_coding MGP_WSBEiJ_T0051345.1 MGP_WSBEiJ_G0024581.1 mouse_genomes_project 2 1743365 1828444 + MGP_WSBEiJ_P0051345 Bend7 protein_coding protein_coding MGP_WSBEiJ_T0051346.1 MGP_WSBEiJ_G0024581.1 mouse_genomes_project 2 1743368 1816814 + MGP_WSBEiJ_P0051346 Bend7 protein_coding protein_coding MGP_WSBEiJ_T0051347.1 MGP_WSBEiJ_G0024581.1 mouse_genomes_project 2 1743679 1828806 + MGP_WSBEiJ_P0051347 Bend7 protein_coding protein_coding MGP_WSBEiJ_T0051348.1 MGP_WSBEiJ_G0024581.1 mouse_genomes_project 2 1777961 1830023 + Bend7 protein_coding processed_transcript MGP_WSBEiJ_T0052635.1 MGP_WSBEiJ_G0024811.1 mouse_genomes_project 2 27838929 27862006 + Urm1 protein_coding processed_transcript MGP_WSBEiJ_T0052636.1 MGP_WSBEiJ_G0024811.1 mouse_genomes_project 2 27846452 27862235 + Urm1 protein_coding processed_transcript MGP_WSBEiJ_T0052637.1 MGP_WSBEiJ_G0024811.1 mouse_genomes_project 2 27846452 27863884 + MGP_WSBEiJ_P0052637 Urm1 protein_coding protein_coding MGP_WSBEiJ_T0052638.1 MGP_WSBEiJ_G0024811.1 mouse_genomes_project 2 27846471 27862282 + Urm1 protein_coding processed_transcript MGP_WSBEiJ_T0052639.1 MGP_WSBEiJ_G0024811.1 mouse_genomes_project 2 27846505 27852725 + Urm1 protein_coding retained_intron MGP_WSBEiJ_T0052640.1 MGP_WSBEiJ_G0024811.1 mouse_genomes_project 2 27860507 27862946 + Urm1 protein_coding retained_intron MGP_WSBEiJ_T0057917.1 MGP_WSBEiJ_G0026056.1 mouse_genomes_project 2 164723216 164844419 - Zhx3 protein_coding processed_transcript MGP_WSBEiJ_T0057925.1 MGP_WSBEiJ_G0026056.1 mouse_genomes_project 2 164739693 164843993 - MGP_WSBEiJ_P0057925 Zhx3 protein_coding protein_coding MGP_WSBEiJ_T0057926.1 MGP_WSBEiJ_G0026056.1 mouse_genomes_project 2 164740290 164831078 - MGP_WSBEiJ_P0057926 Zhx3 protein_coding protein_coding MGP_WSBEiJ_T0057927.1 MGP_WSBEiJ_G0026056.1 mouse_genomes_project 2 164744956 164844411 - MGP_WSBEiJ_P0057927 Zhx3 protein_coding protein_coding MGP_WSBEiJ_T0057928.1 MGP_WSBEiJ_G0026056.1 mouse_genomes_project 2 164756392 164844250 - MGP_WSBEiJ_P0057928 Zhx3 protein_coding protein_coding MGP_WSBEiJ_T0057929.1 MGP_WSBEiJ_G0026056.1 mouse_genomes_project 2 164756429 164844411 - MGP_WSBEiJ_P0057929 Zhx3 protein_coding protein_coding MGP_WSBEiJ_T0057358.1 MGP_WSBEiJ_G0025945.1 mouse_genomes_project 2 157214709 157258841 + MGP_WSBEiJ_P0057358 Dnmt3b protein_coding protein_coding MGP_WSBEiJ_T0057359.1 MGP_WSBEiJ_G0025945.1 mouse_genomes_project 2 157214712 157258841 + MGP_WSBEiJ_P0057359 Dnmt3b protein_coding protein_coding MGP_WSBEiJ_T0057360.1 MGP_WSBEiJ_G0025945.1 mouse_genomes_project 2 157214713 157258837 + MGP_WSBEiJ_P0057360 Dnmt3b protein_coding protein_coding MGP_WSBEiJ_T0057361.1 MGP_WSBEiJ_G0025945.1 mouse_genomes_project 2 157214876 157258427 + MGP_WSBEiJ_P0057361 Dnmt3b protein_coding protein_coding MGP_WSBEiJ_T0057362.1 MGP_WSBEiJ_G0025945.1 mouse_genomes_project 2 157214940 157258846 + MGP_WSBEiJ_P0057362 Dnmt3b protein_coding protein_coding MGP_WSBEiJ_T0057363.1 MGP_WSBEiJ_G0025945.1 mouse_genomes_project 2 157232552 157234710 + Dnmt3b protein_coding retained_intron MGP_WSBEiJ_T0057364.1 MGP_WSBEiJ_G0025945.1 mouse_genomes_project 2 157236120 157237168 + Dnmt3b protein_coding retained_intron MGP_WSBEiJ_T0054648.1 MGP_WSBEiJ_G0025177.1 mouse_genomes_project 2 85351003 85352488 + MGP_WSBEiJ_P0054648 Slc43a3 protein_coding protein_coding MGP_WSBEiJ_T0054649.1 MGP_WSBEiJ_G0025177.1 mouse_genomes_project 2 85351041 85352985 + MGP_WSBEiJ_P0054649 Slc43a3 protein_coding protein_coding MGP_WSBEiJ_T0054650.1 MGP_WSBEiJ_G0025177.1 mouse_genomes_project 2 85351070 85360782 + MGP_WSBEiJ_P0054650 Slc43a3 protein_coding protein_coding MGP_WSBEiJ_T0054651.1 MGP_WSBEiJ_G0025177.1 mouse_genomes_project 2 85351088 85375923 + MGP_WSBEiJ_P0054651 Slc43a3 protein_coding protein_coding MGP_WSBEiJ_T0054652.1 MGP_WSBEiJ_G0025177.1 mouse_genomes_project 2 85351113 85352335 + Slc43a3 protein_coding processed_transcript MGP_WSBEiJ_T0054653.1 MGP_WSBEiJ_G0025177.1 mouse_genomes_project 2 85351545 85364303 + Slc43a3 protein_coding retained_intron MGP_WSBEiJ_T0055013.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91905225 - MGP_WSBEiJ_P0055013 Madd protein_coding protein_coding MGP_WSBEiJ_T0055014.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91908785 - MGP_WSBEiJ_P0055014 Madd protein_coding protein_coding MGP_WSBEiJ_T0055015.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91908745 - MGP_WSBEiJ_P0055015 Madd protein_coding protein_coding MGP_WSBEiJ_T0055016.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91905214 - MGP_WSBEiJ_P0055016 Madd protein_coding protein_coding MGP_WSBEiJ_T0055017.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91909741 - MGP_WSBEiJ_P0055017 Madd protein_coding protein_coding MGP_WSBEiJ_T0055018.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91909741 - MGP_WSBEiJ_P0055018 Madd protein_coding protein_coding MGP_WSBEiJ_T0055019.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91905220 - MGP_WSBEiJ_P0055019 Madd protein_coding protein_coding MGP_WSBEiJ_T0055020.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91909741 - MGP_WSBEiJ_P0055020 Madd protein_coding protein_coding MGP_WSBEiJ_T0055021.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91909741 - MGP_WSBEiJ_P0055021 Madd protein_coding protein_coding MGP_WSBEiJ_T0055022.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91908786 - MGP_WSBEiJ_P0055022 Madd protein_coding protein_coding MGP_WSBEiJ_T0055023.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91909741 - MGP_WSBEiJ_P0055023 Madd protein_coding protein_coding MGP_WSBEiJ_T0055024.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860698 91905216 - MGP_WSBEiJ_P0055024 Madd protein_coding protein_coding MGP_WSBEiJ_T0055025.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860699 91909741 - Madd protein_coding processed_transcript MGP_WSBEiJ_T0055026.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860699 91909741 - Madd protein_coding processed_transcript MGP_WSBEiJ_T0055027.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860699 91909741 - Madd protein_coding processed_transcript MGP_WSBEiJ_T0055028.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860699 91909741 - Madd protein_coding processed_transcript MGP_WSBEiJ_T0055029.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860699 91909741 - Madd protein_coding processed_transcript MGP_WSBEiJ_T0055030.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91860699 91909741 - MGP_WSBEiJ_P0055030 Madd protein_coding protein_coding MGP_WSBEiJ_T0055031.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91861676 91862583 - Madd protein_coding retained_intron MGP_WSBEiJ_T0055032.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91868218 91880186 - Madd protein_coding retained_intron MGP_WSBEiJ_T0055033.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91868447 91877719 - Madd protein_coding retained_intron MGP_WSBEiJ_T0055034.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91877374 91880030 - Madd protein_coding retained_intron MGP_WSBEiJ_T0055035.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91880792 91885572 - Madd protein_coding retained_intron MGP_WSBEiJ_T0055036.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91886260 91908923 - Madd protein_coding retained_intron MGP_WSBEiJ_T0055037.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91886607 91908944 - MGP_WSBEiJ_P0055037 Madd protein_coding protein_coding MGP_WSBEiJ_T0055038.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91893017 91900717 - MGP_WSBEiJ_P0055038 Madd protein_coding protein_coding MGP_WSBEiJ_T0055039.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91903536 91909760 - Madd protein_coding retained_intron MGP_WSBEiJ_T0055040.1 MGP_WSBEiJ_G0025396.1 mouse_genomes_project 2 91904347 91908936 - Madd protein_coding processed_transcript MGP_WSBEiJ_T0098088.1 MGP_WSBEiJ_G0036751.1 mouse_genomes_project 2 22736783 22736890 - Gm25518 snRNA snRNA MGP_WSBEiJ_T0057543.1 MGP_WSBEiJ_G0025991.1 mouse_genomes_project 2 159456774 159461085 + MGP_WSBEiJ_P0057543 Procr protein_coding protein_coding MGP_WSBEiJ_T0057544.1 MGP_WSBEiJ_G0025991.1 mouse_genomes_project 2 159456780 159459943 + MGP_WSBEiJ_P0057544 Procr protein_coding protein_coding MGP_WSBEiJ_T0057545.1 MGP_WSBEiJ_G0025991.1 mouse_genomes_project 2 159456807 159459410 + Procr protein_coding retained_intron MGP_WSBEiJ_T0057546.1 MGP_WSBEiJ_G0025991.1 mouse_genomes_project 2 159457000 159461082 + Procr protein_coding processed_transcript MGP_WSBEiJ_T0052627.1 MGP_WSBEiJ_G0024809.1 mouse_genomes_project 2 27804099 27814469 + MGP_WSBEiJ_P0052627 Coq4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052628.1 MGP_WSBEiJ_G0024809.1 mouse_genomes_project 2 27804826 27813112 + MGP_WSBEiJ_P0052628 Coq4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052629.1 MGP_WSBEiJ_G0024809.1 mouse_genomes_project 2 27804865 27814253 + MGP_WSBEiJ_P0052629 Coq4 protein_coding protein_coding MGP_WSBEiJ_T0052630.1 MGP_WSBEiJ_G0024809.1 mouse_genomes_project 2 27804877 27812512 + MGP_WSBEiJ_P0052630 Coq4 protein_coding protein_coding MGP_WSBEiJ_T0052631.1 MGP_WSBEiJ_G0024809.1 mouse_genomes_project 2 27806583 27807255 + Coq4 protein_coding retained_intron MGP_WSBEiJ_T0052632.1 MGP_WSBEiJ_G0024809.1 mouse_genomes_project 2 27812074 27813496 + Coq4 protein_coding retained_intron MGP_WSBEiJ_T0013123.1 MGP_WSBEiJ_G0011253.1 mouse_genomes_project 2 23310706 23310946 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007291.1 MGP_WSBEiJ_G0005981.1 mouse_genomes_project 2 172251670 172261444 - 1200007C13Rik lincRNA lincRNA MGP_WSBEiJ_T0057696.1 MGP_WSBEiJ_G0026011.1 mouse_genomes_project 2 160042585 160043443 - MGP_WSBEiJ_P0057696 Scand1 protein_coding protein_coding MGP_WSBEiJ_T0013470.1 MGP_WSBEiJ_G0011600.1 mouse_genomes_project 2 160371922 160372563 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056622.1 MGP_WSBEiJ_G0025754.1 mouse_genomes_project 2 133012142 133018940 - MGP_WSBEiJ_P0056622 Cpxm1 protein_coding protein_coding MGP_WSBEiJ_T0056623.1 MGP_WSBEiJ_G0025754.1 mouse_genomes_project 2 133012143 133014643 - Cpxm1 protein_coding retained_intron MGP_WSBEiJ_T0004027.1 MGP_WSBEiJ_G0003567.1 mouse_genomes_project 2 146681780 146695096 - Pcsk2os1 antisense antisense MGP_WSBEiJ_T0004028.1 MGP_WSBEiJ_G0003567.1 mouse_genomes_project 2 146684256 146693240 - Pcsk2os1 antisense antisense MGP_WSBEiJ_T0099340.1 MGP_WSBEiJ_G0038003.1 mouse_genomes_project 2 30461410 30461495 + Gm22192 snoRNA snoRNA MGP_WSBEiJ_T0003836.1 MGP_WSBEiJ_G0003431.1 mouse_genomes_project 2 18358104 18361956 - Gm13362 antisense antisense MGP_WSBEiJ_T0054476.1 MGP_WSBEiJ_G0025139.1 mouse_genomes_project 2 79504752 79507179 + Itga4 protein_coding processed_transcript MGP_WSBEiJ_T0054477.1 MGP_WSBEiJ_G0025139.1 mouse_genomes_project 2 79504826 79593381 + MGP_WSBEiJ_P0054477 Itga4 protein_coding protein_coding MGP_WSBEiJ_T0054478.1 MGP_WSBEiJ_G0025139.1 mouse_genomes_project 2 79504898 79524235 + Itga4 protein_coding processed_transcript MGP_WSBEiJ_T0054479.1 MGP_WSBEiJ_G0025139.1 mouse_genomes_project 2 79505047 79546595 + Itga4 protein_coding processed_transcript MGP_WSBEiJ_T0054480.1 MGP_WSBEiJ_G0025139.1 mouse_genomes_project 2 79505273 79546299 + Itga4 protein_coding processed_transcript MGP_WSBEiJ_T0001029.1 MGP_WSBEiJ_G0000964.1 mouse_genomes_project 2 30752466 30756625 + TEC TEC MGP_WSBEiJ_T0007271.1 MGP_WSBEiJ_G0005965.1 mouse_genomes_project 2 166905083 166908178 - lincRNA lincRNA MGP_WSBEiJ_T0003833.1 MGP_WSBEiJ_G0003428.1 mouse_genomes_project 2 17256053 17258996 - Gm13348 antisense antisense MGP_WSBEiJ_T0013251.1 MGP_WSBEiJ_G0011381.1 mouse_genomes_project 2 75574978 75575723 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055534.1 MGP_WSBEiJ_G0025486.1 mouse_genomes_project 2 108152639 108340532 + MGP_WSBEiJ_P0055534 Mpped2 protein_coding protein_coding MGP_WSBEiJ_T0055535.1 MGP_WSBEiJ_G0025486.1 mouse_genomes_project 2 108154577 108209629 + MGP_WSBEiJ_P0055535 Mpped2 protein_coding protein_coding MGP_WSBEiJ_T0055536.1 MGP_WSBEiJ_G0025486.1 mouse_genomes_project 2 108154938 108339386 + MGP_WSBEiJ_P0055536 Mpped2 protein_coding protein_coding MGP_WSBEiJ_T0055537.1 MGP_WSBEiJ_G0025486.1 mouse_genomes_project 2 108154960 108249207 + Mpped2 protein_coding processed_transcript MGP_WSBEiJ_T0055538.1 MGP_WSBEiJ_G0025486.1 mouse_genomes_project 2 108155191 108339215 + MGP_WSBEiJ_P0055538 Mpped2 protein_coding protein_coding MGP_WSBEiJ_T0055539.1 MGP_WSBEiJ_G0025486.1 mouse_genomes_project 2 108195358 108249325 + Mpped2 protein_coding processed_transcript MGP_WSBEiJ_T0051523.1 MGP_WSBEiJ_G0024612.1 mouse_genomes_project 2 8978185 9028617 + MGP_WSBEiJ_P0051523 Il2ra protein_coding protein_coding MGP_WSBEiJ_T0051524.1 MGP_WSBEiJ_G0024612.1 mouse_genomes_project 2 9014903 9015405 + Il2ra protein_coding retained_intron MGP_WSBEiJ_T0053764.1 MGP_WSBEiJ_G0025004.1 mouse_genomes_project 2 53098998 53100458 - MGP_WSBEiJ_P0053764 Rprm protein_coding protein_coding MGP_WSBEiJ_T0058453.1 MGP_WSBEiJ_G0026185.1 mouse_genomes_project 2 175178220 175185646 + MGP_WSBEiJ_P0058453 Pfdn4 protein_coding protein_coding MGP_WSBEiJ_T0058454.1 MGP_WSBEiJ_G0026185.1 mouse_genomes_project 2 175178221 175185859 + MGP_WSBEiJ_P0058454 Pfdn4 protein_coding protein_coding MGP_WSBEiJ_T0013079.1 MGP_WSBEiJ_G0011209.1 mouse_genomes_project 2 8407871 8408805 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054723.1 MGP_WSBEiJ_G0025223.1 mouse_genomes_project 2 86766445 86767654 - MGP_WSBEiJ_P0054723 Olfr1049 protein_coding protein_coding MGP_WSBEiJ_T0003913.1 MGP_WSBEiJ_G0003489.1 mouse_genomes_project 2 65624010 65628997 + Gm13618 antisense antisense MGP_WSBEiJ_T0056551.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131775667 131782168 + MGP_WSBEiJ_P0056551 Slc20a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056552.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131775719 131789466 + MGP_WSBEiJ_P0056552 Slc20a1 protein_coding protein_coding MGP_WSBEiJ_T0056553.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131775756 131779030 + Slc20a1 protein_coding retained_intron MGP_WSBEiJ_T0056554.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131775758 131782959 + Slc20a1 protein_coding processed_transcript MGP_WSBEiJ_T0056555.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131775758 131779028 + Slc20a1 protein_coding retained_intron MGP_WSBEiJ_T0056556.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131776099 131777667 + MGP_WSBEiJ_P0056556 Slc20a1 protein_coding protein_coding MGP_WSBEiJ_T0056557.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131777218 131789459 + MGP_WSBEiJ_P0056557 Slc20a1 protein_coding protein_coding MGP_WSBEiJ_T0056558.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131784169 131786108 + Slc20a1 protein_coding retained_intron MGP_WSBEiJ_T0056559.1 MGP_WSBEiJ_G0025739.1 mouse_genomes_project 2 131785209 131785876 + Slc20a1 protein_coding retained_intron MGP_WSBEiJ_T0004046.1 MGP_WSBEiJ_G0003582.1 mouse_genomes_project 2 156044319 156048577 - Gm14161 antisense antisense MGP_WSBEiJ_T0007297.1 MGP_WSBEiJ_G0005987.1 mouse_genomes_project 2 173516849 173517654 - Gm14260 lincRNA lincRNA MGP_WSBEiJ_T0054679.1 MGP_WSBEiJ_G0025183.1 mouse_genomes_project 2 85549143 85552842 + MGP_WSBEiJ_P0054679 Aplnr protein_coding protein_coding MGP_WSBEiJ_T0054680.1 MGP_WSBEiJ_G0025183.1 mouse_genomes_project 2 85550311 85552840 + MGP_WSBEiJ_P0054680 Aplnr protein_coding protein_coding MGP_WSBEiJ_T0013206.1 MGP_WSBEiJ_G0011336.1 mouse_genomes_project 2 57887759 57888622 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052268.1 MGP_WSBEiJ_G0024744.1 mouse_genomes_project 2 24040930 24049010 - MGP_WSBEiJ_P0052268 Lhx3 protein_coding protein_coding MGP_WSBEiJ_T0052269.1 MGP_WSBEiJ_G0024744.1 mouse_genomes_project 2 24040934 24043591 - Lhx3 protein_coding retained_intron MGP_WSBEiJ_T0052270.1 MGP_WSBEiJ_G0024744.1 mouse_genomes_project 2 24040934 24047296 - MGP_WSBEiJ_P0052270 Lhx3 protein_coding protein_coding MGP_WSBEiJ_T0052271.1 MGP_WSBEiJ_G0024744.1 mouse_genomes_project 2 24043200 24044166 - Lhx3 protein_coding retained_intron MGP_WSBEiJ_T0054823.1 MGP_WSBEiJ_G0025310.1 mouse_genomes_project 2 89213396 89214332 + MGP_WSBEiJ_P0054823 Olfr1184 protein_coding protein_coding MGP_WSBEiJ_T0052209.1 MGP_WSBEiJ_G0024728.1 mouse_genomes_project 2 23428191 23431285 + MGP_WSBEiJ_P0052209 Lcn8 protein_coding protein_coding MGP_WSBEiJ_T0001049.1 MGP_WSBEiJ_G0000984.1 mouse_genomes_project 2 68456430 68459932 + TEC TEC MGP_WSBEiJ_T0004033.1 MGP_WSBEiJ_G0003570.1 mouse_genomes_project 2 147417858 147419455 + 4930444E06Rik antisense antisense MGP_WSBEiJ_T0013420.1 MGP_WSBEiJ_G0011550.1 mouse_genomes_project 2 146485176 146485326 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058006.1 MGP_WSBEiJ_G0026075.1 mouse_genomes_project 2 167705336 167728400 - MGP_WSBEiJ_P0058006 Serinc3 protein_coding protein_coding MGP_WSBEiJ_T0058007.1 MGP_WSBEiJ_G0026075.1 mouse_genomes_project 2 167720101 167728394 - Serinc3 protein_coding processed_transcript MGP_WSBEiJ_T0013271.1 MGP_WSBEiJ_G0011401.1 mouse_genomes_project 2 82495348 82495943 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057514.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159261108 159292425 - MGP_WSBEiJ_P0057514 Gss protein_coding protein_coding MGP_WSBEiJ_T0057515.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159261116 159292329 - MGP_WSBEiJ_P0057515 Gss protein_coding protein_coding MGP_WSBEiJ_T0057516.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159261416 159271024 - MGP_WSBEiJ_P0057516 Gss protein_coding protein_coding MGP_WSBEiJ_T0057517.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159262138 159272409 - Gss protein_coding retained_intron MGP_WSBEiJ_T0057520.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159270984 159280637 - MGP_WSBEiJ_P0057520 Gss protein_coding protein_coding MGP_WSBEiJ_T0057521.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159274814 159292342 - Gss protein_coding processed_transcript MGP_WSBEiJ_T0057522.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159275550 159285556 - Gss protein_coding retained_intron MGP_WSBEiJ_T0057523.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159275621 159292182 - MGP_WSBEiJ_P0057523 Gss protein_coding protein_coding MGP_WSBEiJ_T0057524.1 MGP_WSBEiJ_G0025986.1 mouse_genomes_project 2 159276333 159280629 - Gss protein_coding processed_transcript MGP_WSBEiJ_T0057400.1 MGP_WSBEiJ_G0025959.1 mouse_genomes_project 2 157832110 157849848 + MGP_WSBEiJ_P0057400 Bpifb5 protein_coding protein_coding MGP_WSBEiJ_T0003868.1 MGP_WSBEiJ_G0003453.1 mouse_genomes_project 2 29378462 29380345 - Gm13405 antisense antisense MGP_WSBEiJ_T0100060.1 MGP_WSBEiJ_G0038678.1 mouse_genomes_project 2 106965929 106966319 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013492.1 MGP_WSBEiJ_G0011622.1 mouse_genomes_project 2 170227232 170227794 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011293.1 MGP_WSBEiJ_G0009450.1 mouse_genomes_project 2 32149949 32150319 + Nron misc_RNA misc_RNA MGP_WSBEiJ_T0052678.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 27994605 28062979 + MGP_WSBEiJ_P0052678 Sptan1 protein_coding protein_coding MGP_WSBEiJ_T0052679.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 27994605 28062982 + MGP_WSBEiJ_P0052679 Sptan1 protein_coding protein_coding MGP_WSBEiJ_T0052680.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 27994722 28025813 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0052681.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 27994724 27996197 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0052682.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 27994725 28062982 + MGP_WSBEiJ_P0052682 Sptan1 protein_coding protein_coding MGP_WSBEiJ_T0052683.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 27994725 28062976 + MGP_WSBEiJ_P0052683 Sptan1 protein_coding protein_coding MGP_WSBEiJ_T0052684.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 27994725 28013758 + MGP_WSBEiJ_P0052684 Sptan1 protein_coding protein_coding MGP_WSBEiJ_T0052685.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 27994728 28062982 + MGP_WSBEiJ_P0052685 Sptan1 protein_coding protein_coding MGP_WSBEiJ_T0052686.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 28007421 28062715 + MGP_WSBEiJ_P0052686 Sptan1 protein_coding protein_coding MGP_WSBEiJ_T0052687.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 28023731 28025806 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0052688.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 28033593 28039822 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0052689.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 28035800 28038368 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0052690.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 28053359 28056521 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0052691.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 28059101 28062048 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0052692.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 28059134 28062032 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0052693.1 MGP_WSBEiJ_G0024815.1 mouse_genomes_project 2 28061839 28062706 + Sptan1 protein_coding retained_intron MGP_WSBEiJ_T0055458.1 MGP_WSBEiJ_G0025470.1 mouse_genomes_project 2 105972082 106048874 + MGP_WSBEiJ_P0055458 Cstf3 protein_coding protein_coding MGP_WSBEiJ_T0055459.1 MGP_WSBEiJ_G0025470.1 mouse_genomes_project 2 105972091 105993700 + Cstf3 protein_coding retained_intron MGP_WSBEiJ_T0055460.1 MGP_WSBEiJ_G0025470.1 mouse_genomes_project 2 105972177 105991715 + Cstf3 protein_coding retained_intron MGP_WSBEiJ_T0055461.1 MGP_WSBEiJ_G0025470.1 mouse_genomes_project 2 106005850 106048364 + MGP_WSBEiJ_P0055461 Cstf3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055462.1 MGP_WSBEiJ_G0025470.1 mouse_genomes_project 2 106038956 106046883 + Cstf3 protein_coding processed_transcript MGP_WSBEiJ_T0055464.1 MGP_WSBEiJ_G0025470.1 mouse_genomes_project 2 106046580 106047624 + Cstf3 protein_coding processed_transcript MGP_WSBEiJ_T0055465.1 MGP_WSBEiJ_G0025470.1 mouse_genomes_project 2 106047110 106048184 + Cstf3 protein_coding processed_transcript MGP_WSBEiJ_T0098121.1 MGP_WSBEiJ_G0036784.1 mouse_genomes_project 2 124607881 124608035 - Gm24409 snRNA snRNA MGP_WSBEiJ_T0100063.1 MGP_WSBEiJ_G0038681.1 mouse_genomes_project 2 134532921 134533161 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013401.1 MGP_WSBEiJ_G0011531.1 mouse_genomes_project 2 135376581 135377036 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054886.1 MGP_WSBEiJ_G0025361.1 mouse_genomes_project 2 90550702 90551736 - MGP_WSBEiJ_P0054886 protein_coding protein_coding MGP_WSBEiJ_T0056431.1 MGP_WSBEiJ_G0025706.1 mouse_genomes_project 2 129690672 129706247 + Snrnp200 protein_coding retained_intron MGP_WSBEiJ_T0056432.1 MGP_WSBEiJ_G0025706.1 mouse_genomes_project 2 129690685 129723909 + MGP_WSBEiJ_P0056432 Snrnp200 protein_coding protein_coding MGP_WSBEiJ_T0056433.1 MGP_WSBEiJ_G0025706.1 mouse_genomes_project 2 129703752 129708685 + Snrnp200 protein_coding processed_transcript MGP_WSBEiJ_T0056434.1 MGP_WSBEiJ_G0025706.1 mouse_genomes_project 2 129720440 129721781 + Snrnp200 protein_coding retained_intron MGP_WSBEiJ_T0056435.1 MGP_WSBEiJ_G0025706.1 mouse_genomes_project 2 129721546 129723418 + Snrnp200 protein_coding retained_intron MGP_WSBEiJ_T0013426.1 MGP_WSBEiJ_G0011556.1 mouse_genomes_project 2 147533207 147533610 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013504.1 MGP_WSBEiJ_G0011634.1 mouse_genomes_project 2 178977507 178978162 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058030.1 MGP_WSBEiJ_G0026083.1 mouse_genomes_project 2 168155930 168167953 - Tomm34 protein_coding retained_intron MGP_WSBEiJ_T0058031.1 MGP_WSBEiJ_G0026083.1 mouse_genomes_project 2 168155930 168177559 - MGP_WSBEiJ_P0058031 Tomm34 protein_coding protein_coding MGP_WSBEiJ_T0058032.1 MGP_WSBEiJ_G0026083.1 mouse_genomes_project 2 168155930 168177492 - MGP_WSBEiJ_P0058032 Tomm34 protein_coding protein_coding MGP_WSBEiJ_T0017278.1 MGP_WSBEiJ_G0014889.1 mouse_genomes_project 2 131630398 131635121 - Gm14022 processed_transcript processed_transcript MGP_WSBEiJ_T0058327.1 MGP_WSBEiJ_G0026157.1 mouse_genomes_project 2 171408615 171411338 + protein_coding antisense MGP_WSBEiJ_T0058328.1 MGP_WSBEiJ_G0026157.1 mouse_genomes_project 2 171408615 171411337 + MGP_WSBEiJ_P0058328 protein_coding protein_coding MGP_WSBEiJ_T0058329.1 MGP_WSBEiJ_G0026157.1 mouse_genomes_project 2 171408616 171411050 + protein_coding retained_intron MGP_WSBEiJ_T0058330.1 MGP_WSBEiJ_G0026157.1 mouse_genomes_project 2 171408902 171410858 + protein_coding retained_intron MGP_WSBEiJ_T0058331.1 MGP_WSBEiJ_G0026157.1 mouse_genomes_project 2 171408904 171411198 + protein_coding retained_intron MGP_WSBEiJ_T0058332.1 MGP_WSBEiJ_G0026157.1 mouse_genomes_project 2 171409330 171411338 + protein_coding retained_intron MGP_WSBEiJ_T0056325.1 MGP_WSBEiJ_G0025682.1 mouse_genomes_project 2 127710092 127915634 - MGP_WSBEiJ_P0056325 Fbn1 protein_coding protein_coding MGP_WSBEiJ_T0056326.1 MGP_WSBEiJ_G0025682.1 mouse_genomes_project 2 127710125 127919497 - MGP_WSBEiJ_P0056326 Fbn1 protein_coding protein_coding MGP_WSBEiJ_T0056327.1 MGP_WSBEiJ_G0025682.1 mouse_genomes_project 2 127798467 127915321 - Fbn1 protein_coding retained_intron MGP_WSBEiJ_T0055907.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121960085 122035463 + MGP_WSBEiJ_P0055907 Mga protein_coding protein_coding MGP_WSBEiJ_T0055908.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121960085 122035463 + MGP_WSBEiJ_P0055908 Mga protein_coding protein_coding MGP_WSBEiJ_T0055909.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121960085 122035463 + MGP_WSBEiJ_P0055909 Mga protein_coding protein_coding MGP_WSBEiJ_T0055910.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121960085 122033602 + MGP_WSBEiJ_P0055910 Mga protein_coding protein_coding MGP_WSBEiJ_T0055911.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121960089 121979875 + Mga protein_coding retained_intron MGP_WSBEiJ_T0055912.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121960102 122036019 + MGP_WSBEiJ_P0055912 Mga protein_coding unknown_likely_coding MGP_WSBEiJ_T0055913.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121960105 121988579 + Mga protein_coding processed_transcript MGP_WSBEiJ_T0055914.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121960162 122026646 + MGP_WSBEiJ_P0055914 Mga protein_coding protein_coding MGP_WSBEiJ_T0055915.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121983564 121985976 + Mga protein_coding retained_intron MGP_WSBEiJ_T0055916.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121997044 122001498 + Mga protein_coding processed_transcript MGP_WSBEiJ_T0055917.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121997213 122011353 + Mga protein_coding processed_transcript MGP_WSBEiJ_T0055918.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 121997308 122006440 + Mga protein_coding processed_transcript MGP_WSBEiJ_T0055919.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 122006149 122012077 + Mga protein_coding processed_transcript MGP_WSBEiJ_T0055920.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 122006653 122011870 + Mga protein_coding processed_transcript MGP_WSBEiJ_T0055921.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 122024160 122031210 + Mga protein_coding processed_transcript MGP_WSBEiJ_T0055922.1 MGP_WSBEiJ_G0025605.1 mouse_genomes_project 2 122026256 122028074 + Mga protein_coding retained_intron MGP_WSBEiJ_T0056851.1 MGP_WSBEiJ_G0025803.1 mouse_genomes_project 2 135604767 135616441 - MGP_WSBEiJ_P0056851 Lrrn4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0013182.1 MGP_WSBEiJ_G0011312.1 mouse_genomes_project 2 49417674 49417853 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013195.1 MGP_WSBEiJ_G0011325.1 mouse_genomes_project 2 53385144 53385695 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013267.1 MGP_WSBEiJ_G0011397.1 mouse_genomes_project 2 80922254 80922862 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057656.1 MGP_WSBEiJ_G0026008.1 mouse_genomes_project 2 159865194 159866953 + MGP_WSBEiJ_P0057656 Romo1 protein_coding protein_coding MGP_WSBEiJ_T0057657.1 MGP_WSBEiJ_G0026008.1 mouse_genomes_project 2 159865388 159866950 + MGP_WSBEiJ_P0057657 Romo1 protein_coding protein_coding MGP_WSBEiJ_T0057658.1 MGP_WSBEiJ_G0026008.1 mouse_genomes_project 2 159865392 159866939 + MGP_WSBEiJ_P0057658 Romo1 protein_coding protein_coding MGP_WSBEiJ_T0057659.1 MGP_WSBEiJ_G0026008.1 mouse_genomes_project 2 159865395 159866950 + MGP_WSBEiJ_P0057659 Romo1 protein_coding protein_coding MGP_WSBEiJ_T0004054.1 MGP_WSBEiJ_G0003589.1 mouse_genomes_project 2 159291933 159294568 + Gssos1 antisense antisense MGP_WSBEiJ_T0057287.1 MGP_WSBEiJ_G0025928.1 mouse_genomes_project 2 156361254 156412429 + MGP_WSBEiJ_P0057287 Tpx2 protein_coding protein_coding MGP_WSBEiJ_T0057288.1 MGP_WSBEiJ_G0025928.1 mouse_genomes_project 2 156361254 156412429 + MGP_WSBEiJ_P0057288 Tpx2 protein_coding protein_coding MGP_WSBEiJ_T0057289.1 MGP_WSBEiJ_G0025928.1 mouse_genomes_project 2 156361268 156411762 + MGP_WSBEiJ_P0057289 Tpx2 protein_coding protein_coding MGP_WSBEiJ_T0057290.1 MGP_WSBEiJ_G0025928.1 mouse_genomes_project 2 156361285 156411762 + MGP_WSBEiJ_P0057290 Tpx2 protein_coding protein_coding MGP_WSBEiJ_T0057291.1 MGP_WSBEiJ_G0025928.1 mouse_genomes_project 2 156361372 156369281 + Tpx2 protein_coding processed_transcript MGP_WSBEiJ_T0057292.1 MGP_WSBEiJ_G0025928.1 mouse_genomes_project 2 156384713 156397473 + Tpx2 protein_coding retained_intron MGP_WSBEiJ_T0057293.1 MGP_WSBEiJ_G0025928.1 mouse_genomes_project 2 156398675 156400805 + Tpx2 protein_coding retained_intron MGP_WSBEiJ_T0099336.1 MGP_WSBEiJ_G0037999.1 mouse_genomes_project 2 24778079 24778153 + Gm23969 snoRNA snoRNA MGP_WSBEiJ_T0058422.1 MGP_WSBEiJ_G0026178.1 mouse_genomes_project 2 173244363 173266136 - MGP_WSBEiJ_P0058422 Sall4 protein_coding protein_coding MGP_WSBEiJ_T0058423.1 MGP_WSBEiJ_G0026178.1 mouse_genomes_project 2 173244363 173266136 - MGP_WSBEiJ_P0058423 Sall4 protein_coding protein_coding MGP_WSBEiJ_T0058424.1 MGP_WSBEiJ_G0026178.1 mouse_genomes_project 2 173244363 173265964 - MGP_WSBEiJ_P0058424 Sall4 protein_coding protein_coding MGP_WSBEiJ_T0058425.1 MGP_WSBEiJ_G0026178.1 mouse_genomes_project 2 173250947 173251976 - MGP_WSBEiJ_P0058425 Sall4 protein_coding protein_coding MGP_WSBEiJ_T0058426.1 MGP_WSBEiJ_G0026178.1 mouse_genomes_project 2 173252213 173264180 - MGP_WSBEiJ_P0058426 Sall4 protein_coding protein_coding MGP_WSBEiJ_T0058427.1 MGP_WSBEiJ_G0026178.1 mouse_genomes_project 2 173252646 173266878 - Sall4 protein_coding processed_transcript MGP_WSBEiJ_T0058428.1 MGP_WSBEiJ_G0026178.1 mouse_genomes_project 2 173252785 173266052 - Sall4 protein_coding processed_transcript MGP_WSBEiJ_T0010216.1 MGP_WSBEiJ_G0008373.1 mouse_genomes_project 2 22657057 22657375 + miRNA miRNA MGP_WSBEiJ_T0013500.1 MGP_WSBEiJ_G0011630.1 mouse_genomes_project 2 172699003 172699440 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007221.1 MGP_WSBEiJ_G0005922.1 mouse_genomes_project 2 135125601 135152607 + 4921508D12Rik lincRNA lincRNA MGP_WSBEiJ_T0003889.1 MGP_WSBEiJ_G0003471.1 mouse_genomes_project 2 36814610 36819011 - Gm13584 antisense antisense MGP_WSBEiJ_T0007207.1 MGP_WSBEiJ_G0005911.1 mouse_genomes_project 2 121626107 121633460 + 1700020I14Rik lincRNA lincRNA MGP_WSBEiJ_T0007208.1 MGP_WSBEiJ_G0005911.1 mouse_genomes_project 2 121626113 121640965 + 1700020I14Rik lincRNA lincRNA MGP_WSBEiJ_T0007279.1 MGP_WSBEiJ_G0005973.1 mouse_genomes_project 2 170504266 170505664 - Gm11467 lincRNA lincRNA MGP_WSBEiJ_T0007325.1 MGP_WSBEiJ_G0006012.1 mouse_genomes_project 2 186032318 186035379 + lincRNA lincRNA MGP_WSBEiJ_T0055609.1 MGP_WSBEiJ_G0025514.1 mouse_genomes_project 2 113039354 113040529 + MGP_WSBEiJ_P0055609 protein_coding protein_coding MGP_WSBEiJ_T0054780.1 MGP_WSBEiJ_G0025275.1 mouse_genomes_project 2 88189189 88191857 + Pramel6 protein_coding processed_transcript MGP_WSBEiJ_T0054781.1 MGP_WSBEiJ_G0025275.1 mouse_genomes_project 2 88189189 88191848 + Pramel6 protein_coding processed_transcript MGP_WSBEiJ_T0054782.1 MGP_WSBEiJ_G0025275.1 mouse_genomes_project 2 88189207 88192028 + Pramel6 protein_coding processed_transcript MGP_WSBEiJ_T0054783.1 MGP_WSBEiJ_G0025275.1 mouse_genomes_project 2 88190050 88191941 + Pramel6 protein_coding processed_transcript MGP_WSBEiJ_T0054784.1 MGP_WSBEiJ_G0025275.1 mouse_genomes_project 2 88190050 88193501 + MGP_WSBEiJ_P0054784 Pramel6 protein_coding protein_coding MGP_WSBEiJ_T0054785.1 MGP_WSBEiJ_G0025275.1 mouse_genomes_project 2 88191083 88193494 + MGP_WSBEiJ_P0054785 Pramel6 protein_coding protein_coding MGP_WSBEiJ_T0013399.1 MGP_WSBEiJ_G0011529.1 mouse_genomes_project 2 134533976 134535270 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052251.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23822068 23831454 - Ubac1 protein_coding processed_transcript MGP_WSBEiJ_T0052252.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23822068 23845484 - MGP_WSBEiJ_P0052252 Ubac1 protein_coding protein_coding MGP_WSBEiJ_T0052253.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23822331 23832761 - Ubac1 protein_coding processed_transcript MGP_WSBEiJ_T0052254.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23828937 23839862 - MGP_WSBEiJ_P0052254 Ubac1 protein_coding protein_coding MGP_WSBEiJ_T0052255.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23830060 23845269 - MGP_WSBEiJ_P0052255 Ubac1 protein_coding protein_coding MGP_WSBEiJ_T0052256.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23832432 23834491 - Ubac1 protein_coding processed_transcript MGP_WSBEiJ_T0052257.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23834072 23841028 - Ubac1 protein_coding processed_transcript MGP_WSBEiJ_T0052258.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23838449 23845303 - Ubac1 protein_coding processed_transcript MGP_WSBEiJ_T0052259.1 MGP_WSBEiJ_G0024742.1 mouse_genomes_project 2 23839514 23845339 - Ubac1 protein_coding processed_transcript MGP_WSBEiJ_T0007178.1 MGP_WSBEiJ_G0005888.1 mouse_genomes_project 2 107088101 107090933 - Paupar lincRNA lincRNA MGP_WSBEiJ_T0003840.1 MGP_WSBEiJ_G0003435.1 mouse_genomes_project 2 23032523 23040829 + Grin1os antisense antisense MGP_WSBEiJ_T0054351.1 MGP_WSBEiJ_G0025110.1 mouse_genomes_project 2 74561032 74563722 + MGP_WSBEiJ_P0054351 Hoxd12 protein_coding protein_coding MGP_WSBEiJ_T0057378.1 MGP_WSBEiJ_G0025951.1 mouse_genomes_project 2 157517682 157532653 + MGP_WSBEiJ_P0057378 Bpifb3 protein_coding protein_coding MGP_WSBEiJ_T0057379.1 MGP_WSBEiJ_G0025951.1 mouse_genomes_project 2 157517846 157532650 + MGP_WSBEiJ_P0057379 Bpifb3 protein_coding protein_coding MGP_WSBEiJ_T0057550.1 MGP_WSBEiJ_G0025994.1 mouse_genomes_project 2 159528499 159537182 - MGP_WSBEiJ_P0057550 Eif6 protein_coding protein_coding MGP_WSBEiJ_T0057551.1 MGP_WSBEiJ_G0025994.1 mouse_genomes_project 2 159528504 159531146 - Eif6 protein_coding processed_transcript MGP_WSBEiJ_T0057552.1 MGP_WSBEiJ_G0025994.1 mouse_genomes_project 2 159528700 159536693 - MGP_WSBEiJ_P0057552 Eif6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057553.1 MGP_WSBEiJ_G0025994.1 mouse_genomes_project 2 159531502 159536693 - Eif6 protein_coding retained_intron MGP_WSBEiJ_T0057554.1 MGP_WSBEiJ_G0025994.1 mouse_genomes_project 2 159531502 159536693 - MGP_WSBEiJ_P0057554 Eif6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057555.1 MGP_WSBEiJ_G0025994.1 mouse_genomes_project 2 159532444 159537023 - MGP_WSBEiJ_P0057555 Eif6 protein_coding protein_coding MGP_WSBEiJ_T0057556.1 MGP_WSBEiJ_G0025994.1 mouse_genomes_project 2 159535416 159536920 - MGP_WSBEiJ_P0057556 Eif6 protein_coding protein_coding MGP_WSBEiJ_T0058684.1 MGP_WSBEiJ_G0026253.1 mouse_genomes_project 2 186132376 186153044 - MGP_WSBEiJ_P0058684 Nkain4 protein_coding protein_coding MGP_WSBEiJ_T0058685.1 MGP_WSBEiJ_G0026253.1 mouse_genomes_project 2 186132376 186153044 - MGP_WSBEiJ_P0058685 Nkain4 protein_coding protein_coding MGP_WSBEiJ_T0058686.1 MGP_WSBEiJ_G0026253.1 mouse_genomes_project 2 186132376 186140770 - MGP_WSBEiJ_P0058686 Nkain4 protein_coding protein_coding MGP_WSBEiJ_T0058687.1 MGP_WSBEiJ_G0026253.1 mouse_genomes_project 2 186133589 186152965 - MGP_WSBEiJ_P0058687 Nkain4 protein_coding protein_coding MGP_WSBEiJ_T0058688.1 MGP_WSBEiJ_G0026253.1 mouse_genomes_project 2 186134785 186153039 - MGP_WSBEiJ_P0058688 Nkain4 protein_coding protein_coding MGP_WSBEiJ_T0058689.1 MGP_WSBEiJ_G0026253.1 mouse_genomes_project 2 186140856 186152663 - Nkain4 protein_coding processed_transcript MGP_WSBEiJ_T0058690.1 MGP_WSBEiJ_G0026253.1 mouse_genomes_project 2 186141432 186147935 - MGP_WSBEiJ_P0058690 Nkain4 protein_coding protein_coding MGP_WSBEiJ_T0051641.1 MGP_WSBEiJ_G0024629.1 mouse_genomes_project 2 11846201 11956400 + MGP_WSBEiJ_P0051641 Slc39a12 protein_coding protein_coding MGP_WSBEiJ_T0051642.1 MGP_WSBEiJ_G0024629.1 mouse_genomes_project 2 11846389 11847427 + MGP_WSBEiJ_P0051642 Slc39a12 protein_coding protein_coding MGP_WSBEiJ_T0004095.1 MGP_WSBEiJ_G0003622.1 mouse_genomes_project 2 176803065 176806642 + Gm14271 antisense antisense MGP_WSBEiJ_T0057137.1 MGP_WSBEiJ_G0025879.1 mouse_genomes_project 2 153995377 154003889 + MGP_WSBEiJ_P0057137 Cst7 protein_coding protein_coding MGP_WSBEiJ_T0058411.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173110715 173237411 - MGP_WSBEiJ_P0058411 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0058412.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173110715 173237744 - MGP_WSBEiJ_P0058412 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0058413.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173110715 173227732 - MGP_WSBEiJ_P0058413 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0058414.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173110715 173237573 - MGP_WSBEiJ_P0058414 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0058415.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173110740 173237575 - MGP_WSBEiJ_P0058415 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0058416.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173141272 173150262 - Atp9a protein_coding processed_transcript MGP_WSBEiJ_T0058417.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173146963 173237411 - Atp9a protein_coding retained_intron MGP_WSBEiJ_T0058418.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173176141 173237986 - MGP_WSBEiJ_P0058418 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0058419.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173176149 173238020 - MGP_WSBEiJ_P0058419 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0058420.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173193497 173203310 - MGP_WSBEiJ_P0058420 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0058421.1 MGP_WSBEiJ_G0026177.1 mouse_genomes_project 2 173193564 173203359 - MGP_WSBEiJ_P0058421 Atp9a protein_coding protein_coding MGP_WSBEiJ_T0100735.1 MGP_WSBEiJ_G0039193.1 mouse_genomes_project 2 91111582 91113568 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0052185.1 MGP_WSBEiJ_G0024723.1 mouse_genomes_project 2 23343616 23349927 - MGP_WSBEiJ_P0052185 Gm996 protein_coding protein_coding MGP_WSBEiJ_T0052186.1 MGP_WSBEiJ_G0024723.1 mouse_genomes_project 2 23343630 23349956 - MGP_WSBEiJ_P0052186 Gm996 protein_coding protein_coding MGP_WSBEiJ_T0052187.1 MGP_WSBEiJ_G0024723.1 mouse_genomes_project 2 23345173 23348098 - MGP_WSBEiJ_P0052187 Gm996 protein_coding protein_coding MGP_WSBEiJ_T0052188.1 MGP_WSBEiJ_G0024723.1 mouse_genomes_project 2 23348011 23348464 - MGP_WSBEiJ_P0052188 Gm996 protein_coding protein_coding MGP_WSBEiJ_T0051572.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9722767 9800080 - Fam188a protein_coding processed_transcript MGP_WSBEiJ_T0051573.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9722767 9800102 - MGP_WSBEiJ_P0051573 Fam188a protein_coding protein_coding MGP_WSBEiJ_T0051574.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9722767 9800080 - MGP_WSBEiJ_P0051574 Fam188a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051575.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9722767 9800076 - MGP_WSBEiJ_P0051575 Fam188a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051576.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9722767 9800067 - MGP_WSBEiJ_P0051576 Fam188a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051577.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9722770 9800084 - MGP_WSBEiJ_P0051577 Fam188a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051578.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9723136 9732434 - MGP_WSBEiJ_P0051578 Fam188a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051579.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9723422 9776218 - Fam188a protein_coding retained_intron MGP_WSBEiJ_T0051580.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9723470 9799920 - Fam188a protein_coding processed_transcript MGP_WSBEiJ_T0051581.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9726434 9800042 - MGP_WSBEiJ_P0051581 Fam188a protein_coding protein_coding MGP_WSBEiJ_T0051582.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9732307 9800063 - Fam188a protein_coding retained_intron MGP_WSBEiJ_T0051583.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9741976 9743821 - Fam188a protein_coding retained_intron MGP_WSBEiJ_T0051584.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9742145 9800081 - MGP_WSBEiJ_P0051584 Fam188a protein_coding protein_coding MGP_WSBEiJ_T0051585.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9764638 9765474 - Fam188a protein_coding retained_intron MGP_WSBEiJ_T0051586.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9765339 9789688 - MGP_WSBEiJ_P0051586 Fam188a protein_coding protein_coding MGP_WSBEiJ_T0051587.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9778677 9800073 - Fam188a protein_coding retained_intron MGP_WSBEiJ_T0051588.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9779062 9789827 - Fam188a protein_coding retained_intron MGP_WSBEiJ_T0051589.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9780077 9800023 - MGP_WSBEiJ_P0051589 Fam188a protein_coding protein_coding MGP_WSBEiJ_T0051590.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9780088 9799881 - MGP_WSBEiJ_P0051590 Fam188a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051591.1 MGP_WSBEiJ_G0024617.1 mouse_genomes_project 2 9783016 9783748 - Fam188a protein_coding processed_transcript MGP_WSBEiJ_T0053420.1 MGP_WSBEiJ_G0024924.1 mouse_genomes_project 2 34508012 34540115 + MGP_WSBEiJ_P0053420 Morn5 protein_coding protein_coding MGP_WSBEiJ_T0051468.1 MGP_WSBEiJ_G0024603.1 mouse_genomes_project 2 7346162 7372560 - MGP_WSBEiJ_P0051468 Atp5c1 protein_coding protein_coding MGP_WSBEiJ_T0051469.1 MGP_WSBEiJ_G0024603.1 mouse_genomes_project 2 7346399 7372584 - MGP_WSBEiJ_P0051469 Atp5c1 protein_coding protein_coding MGP_WSBEiJ_T0051470.1 MGP_WSBEiJ_G0024603.1 mouse_genomes_project 2 7346413 7372601 - MGP_WSBEiJ_P0051470 Atp5c1 protein_coding protein_coding MGP_WSBEiJ_T0051471.1 MGP_WSBEiJ_G0024603.1 mouse_genomes_project 2 7346413 7372667 - MGP_WSBEiJ_P0051471 Atp5c1 protein_coding protein_coding MGP_WSBEiJ_T0051472.1 MGP_WSBEiJ_G0024603.1 mouse_genomes_project 2 7353528 7372016 - MGP_WSBEiJ_P0051472 Atp5c1 protein_coding protein_coding MGP_WSBEiJ_T0051473.1 MGP_WSBEiJ_G0024603.1 mouse_genomes_project 2 7353672 7372333 - MGP_WSBEiJ_P0051473 Atp5c1 protein_coding protein_coding MGP_WSBEiJ_T0051474.1 MGP_WSBEiJ_G0024603.1 mouse_genomes_project 2 7354334 7372212 - MGP_WSBEiJ_P0051474 Atp5c1 protein_coding protein_coding MGP_WSBEiJ_T0007033.1 MGP_WSBEiJ_G0005773.1 mouse_genomes_project 2 8352974 8376466 + Gm13264 lincRNA lincRNA MGP_WSBEiJ_T0053447.1 MGP_WSBEiJ_G0024933.1 mouse_genomes_project 2 35017729 35018659 + MGP_WSBEiJ_P0053447 Olfr344 protein_coding protein_coding MGP_WSBEiJ_T0013333.1 MGP_WSBEiJ_G0011463.1 mouse_genomes_project 2 105144651 105145068 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007114.1 MGP_WSBEiJ_G0005838.1 mouse_genomes_project 2 71512525 71520127 + Gm13647 lincRNA lincRNA MGP_WSBEiJ_T0007084.1 MGP_WSBEiJ_G0005811.1 mouse_genomes_project 2 44070814 44119130 + Gm13479 lincRNA lincRNA MGP_WSBEiJ_T0054879.1 MGP_WSBEiJ_G0025356.1 mouse_genomes_project 2 90402546 90403491 - MGP_WSBEiJ_P0054879 Olfr1246 protein_coding protein_coding MGP_WSBEiJ_T0055319.1 MGP_WSBEiJ_G0025442.1 mouse_genomes_project 2 102841349 102850692 + MGP_WSBEiJ_P0055319 Rag2 protein_coding protein_coding MGP_WSBEiJ_T0055320.1 MGP_WSBEiJ_G0025442.1 mouse_genomes_project 2 102841377 102849216 + MGP_WSBEiJ_P0055320 Rag2 protein_coding protein_coding MGP_WSBEiJ_T0052932.1 MGP_WSBEiJ_G0024850.1 mouse_genomes_project 2 29647631 29703112 + MGP_WSBEiJ_P0052932 Ass1 protein_coding protein_coding MGP_WSBEiJ_T0052933.1 MGP_WSBEiJ_G0024850.1 mouse_genomes_project 2 29678172 29692553 + Ass1 protein_coding retained_intron MGP_WSBEiJ_T0052934.1 MGP_WSBEiJ_G0024850.1 mouse_genomes_project 2 29681124 29697199 + Ass1 protein_coding retained_intron MGP_WSBEiJ_T0052935.1 MGP_WSBEiJ_G0024850.1 mouse_genomes_project 2 29700914 29702972 + Ass1 protein_coding retained_intron MGP_WSBEiJ_T0057598.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159727248 159737358 + MGP_WSBEiJ_P0057598 Ergic3 protein_coding protein_coding MGP_WSBEiJ_T0057599.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159727309 159737358 + MGP_WSBEiJ_P0057599 Ergic3 protein_coding protein_coding MGP_WSBEiJ_T0057600.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159727426 159730427 + Ergic3 protein_coding retained_intron MGP_WSBEiJ_T0057601.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159727822 159736717 + MGP_WSBEiJ_P0057601 Ergic3 protein_coding protein_coding MGP_WSBEiJ_T0057602.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159729641 159737166 + MGP_WSBEiJ_P0057602 Ergic3 protein_coding protein_coding MGP_WSBEiJ_T0057603.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159735587 159737229 + Ergic3 protein_coding processed_transcript MGP_WSBEiJ_T0057604.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159736293 159737175 + Ergic3 protein_coding processed_transcript MGP_WSBEiJ_T0057605.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159736572 159737358 + Ergic3 protein_coding retained_intron MGP_WSBEiJ_T0057606.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159736624 159737358 + Ergic3 protein_coding retained_intron MGP_WSBEiJ_T0057607.1 MGP_WSBEiJ_G0026001.1 mouse_genomes_project 2 159736726 159737356 + Ergic3 protein_coding retained_intron MGP_WSBEiJ_T0007185.1 MGP_WSBEiJ_G0005895.1 mouse_genomes_project 2 116022964 116024226 - Gm29234 lincRNA lincRNA MGP_WSBEiJ_T0013086.1 MGP_WSBEiJ_G0011216.1 mouse_genomes_project 2 12208747 12209215 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013464.1 MGP_WSBEiJ_G0011594.1 mouse_genomes_project 2 159244306 159244768 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007098.1 MGP_WSBEiJ_G0005823.1 mouse_genomes_project 2 50575653 50655665 - Gm13490 lincRNA lincRNA MGP_WSBEiJ_T0054822.1 MGP_WSBEiJ_G0025309.1 mouse_genomes_project 2 89186628 89187540 + MGP_WSBEiJ_P0054822 Olfr1183 protein_coding protein_coding MGP_WSBEiJ_T0058019.1 MGP_WSBEiJ_G0026078.1 mouse_genomes_project 2 167909720 167917870 + Wisp2 protein_coding processed_transcript MGP_WSBEiJ_T0058020.1 MGP_WSBEiJ_G0026078.1 mouse_genomes_project 2 167909748 167922002 + MGP_WSBEiJ_P0058020 Wisp2 protein_coding protein_coding MGP_WSBEiJ_T0052926.1 MGP_WSBEiJ_G0024849.1 mouse_genomes_project 2 29487775 29638371 + MGP_WSBEiJ_P0052926 protein_coding protein_coding MGP_WSBEiJ_T0052927.1 MGP_WSBEiJ_G0024849.1 mouse_genomes_project 2 29487775 29638374 + MGP_WSBEiJ_P0052927 protein_coding unknown_likely_coding MGP_WSBEiJ_T0052928.1 MGP_WSBEiJ_G0024849.1 mouse_genomes_project 2 29576209 29581679 + MGP_WSBEiJ_P0052928 protein_coding protein_coding MGP_WSBEiJ_T0052929.1 MGP_WSBEiJ_G0024849.1 mouse_genomes_project 2 29614923 29638357 + protein_coding retained_intron MGP_WSBEiJ_T0052930.1 MGP_WSBEiJ_G0024849.1 mouse_genomes_project 2 29623595 29638370 + protein_coding processed_transcript MGP_WSBEiJ_T0052931.1 MGP_WSBEiJ_G0024849.1 mouse_genomes_project 2 29632380 29635659 + protein_coding retained_intron MGP_WSBEiJ_T0001051.1 MGP_WSBEiJ_G0000986.1 mouse_genomes_project 2 68523781 68525289 + TEC TEC MGP_WSBEiJ_T0013077.1 MGP_WSBEiJ_G0011207.1 mouse_genomes_project 2 8214366 8214787 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056730.1 MGP_WSBEiJ_G0025778.1 mouse_genomes_project 2 133828817 133832439 - MGP_WSBEiJ_P0056730 Spef1 protein_coding protein_coding MGP_WSBEiJ_T0058166.1 MGP_WSBEiJ_G0026131.1 mouse_genomes_project 2 169076729 169099245 - MGP_WSBEiJ_P0058166 Zfp335 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058167.1 MGP_WSBEiJ_G0026131.1 mouse_genomes_project 2 169076729 169099245 - MGP_WSBEiJ_P0058167 Zfp335 protein_coding protein_coding MGP_WSBEiJ_T0058168.1 MGP_WSBEiJ_G0026131.1 mouse_genomes_project 2 169077011 169098310 - MGP_WSBEiJ_P0058168 Zfp335 protein_coding unknown_likely_coding MGP_WSBEiJ_T0058169.1 MGP_WSBEiJ_G0026131.1 mouse_genomes_project 2 169088659 169095153 - MGP_WSBEiJ_P0058169 Zfp335 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054796.1 MGP_WSBEiJ_G0025285.1 mouse_genomes_project 2 88471173 88472124 + MGP_WSBEiJ_P0054796 Olfr152 protein_coding protein_coding MGP_WSBEiJ_T0054797.1 MGP_WSBEiJ_G0025285.1 mouse_genomes_project 2 88471179 88472124 + MGP_WSBEiJ_P0054797 Olfr152 protein_coding protein_coding MGP_WSBEiJ_T0010312.1 MGP_WSBEiJ_G0008469.1 mouse_genomes_project 2 172510364 172510442 - Gm24327 miRNA miRNA MGP_WSBEiJ_T0017229.1 MGP_WSBEiJ_G0014871.1 mouse_genomes_project 2 105933863 105944855 + Platr14 processed_transcript processed_transcript MGP_WSBEiJ_T0017230.1 MGP_WSBEiJ_G0014871.1 mouse_genomes_project 2 105933879 105944852 + Platr14 processed_transcript processed_transcript MGP_WSBEiJ_T0017231.1 MGP_WSBEiJ_G0014871.1 mouse_genomes_project 2 105933884 105948228 + Platr14 processed_transcript processed_transcript MGP_WSBEiJ_T0017232.1 MGP_WSBEiJ_G0014871.1 mouse_genomes_project 2 105933892 105944928 + Platr14 processed_transcript processed_transcript MGP_WSBEiJ_T0017233.1 MGP_WSBEiJ_G0014871.1 mouse_genomes_project 2 105934159 105944849 + Platr14 processed_transcript processed_transcript MGP_WSBEiJ_T0017234.1 MGP_WSBEiJ_G0014871.1 mouse_genomes_project 2 105943995 105945631 + Platr14 processed_transcript processed_transcript MGP_WSBEiJ_T0055075.1 MGP_WSBEiJ_G0025401.1 mouse_genomes_project 2 92001684 92014553 + MGP_WSBEiJ_P0055075 Arfgap2 protein_coding protein_coding MGP_WSBEiJ_T0055076.1 MGP_WSBEiJ_G0025401.1 mouse_genomes_project 2 92002003 92014553 + MGP_WSBEiJ_P0055076 Arfgap2 protein_coding protein_coding MGP_WSBEiJ_T0055077.1 MGP_WSBEiJ_G0025401.1 mouse_genomes_project 2 92002034 92003257 + Arfgap2 protein_coding retained_intron MGP_WSBEiJ_T0055078.1 MGP_WSBEiJ_G0025401.1 mouse_genomes_project 2 92002044 92005455 + Arfgap2 protein_coding retained_intron MGP_WSBEiJ_T0055079.1 MGP_WSBEiJ_G0025401.1 mouse_genomes_project 2 92002412 92004099 + Arfgap2 protein_coding processed_transcript MGP_WSBEiJ_T0055080.1 MGP_WSBEiJ_G0025401.1 mouse_genomes_project 2 92006044 92010361 + Arfgap2 protein_coding retained_intron MGP_WSBEiJ_T0055081.1 MGP_WSBEiJ_G0025401.1 mouse_genomes_project 2 92006794 92010879 + Arfgap2 protein_coding retained_intron MGP_WSBEiJ_T0001043.1 MGP_WSBEiJ_G0000978.1 mouse_genomes_project 2 37236068 37236841 - TEC TEC MGP_WSBEiJ_T0013075.1 MGP_WSBEiJ_G0011205.1 mouse_genomes_project 2 7385215 7387698 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052848.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28931786 28951136 + MGP_WSBEiJ_P0052848 Ntmt1 protein_coding protein_coding MGP_WSBEiJ_T0052849.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28931901 28951120 + MGP_WSBEiJ_P0052849 Ntmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052850.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28931902 28950488 + MGP_WSBEiJ_P0052850 Ntmt1 protein_coding protein_coding MGP_WSBEiJ_T0052851.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28931917 28941785 + Ntmt1 protein_coding processed_transcript MGP_WSBEiJ_T0052852.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28931954 28942249 + Ntmt1 protein_coding processed_transcript MGP_WSBEiJ_T0052853.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28932073 28950655 + MGP_WSBEiJ_P0052853 Ntmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052854.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28932150 28947221 + MGP_WSBEiJ_P0052854 Ntmt1 protein_coding protein_coding MGP_WSBEiJ_T0052855.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28944668 28947341 + MGP_WSBEiJ_P0052855 Ntmt1 protein_coding protein_coding MGP_WSBEiJ_T0052856.1 MGP_WSBEiJ_G0024838.1 mouse_genomes_project 2 28946374 28950662 + MGP_WSBEiJ_P0052856 Ntmt1 protein_coding protein_coding MGP_WSBEiJ_T0097026.1 MGP_WSBEiJ_G0035707.1 mouse_genomes_project 2 94265145 94265248 - Gm23380 rRNA rRNA MGP_WSBEiJ_T0051882.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22043057 22069741 + MGP_WSBEiJ_P0051882 Psd4 protein_coding protein_coding MGP_WSBEiJ_T0051883.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22043087 22091504 + MGP_WSBEiJ_P0051883 Psd4 protein_coding protein_coding MGP_WSBEiJ_T0051884.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22060806 22085281 + MGP_WSBEiJ_P0051884 Psd4 protein_coding protein_coding MGP_WSBEiJ_T0051885.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22060809 22069894 + MGP_WSBEiJ_P0051885 Psd4 protein_coding protein_coding MGP_WSBEiJ_T0051886.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22060810 22072803 + Psd4 protein_coding processed_transcript MGP_WSBEiJ_T0051887.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22060827 22069788 + MGP_WSBEiJ_P0051887 Psd4 protein_coding protein_coding MGP_WSBEiJ_T0051888.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22062043 22070074 + MGP_WSBEiJ_P0051888 Psd4 protein_coding protein_coding MGP_WSBEiJ_T0051889.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22062091 22084752 + MGP_WSBEiJ_P0051889 Psd4 protein_coding protein_coding MGP_WSBEiJ_T0051890.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22077586 22079803 + MGP_WSBEiJ_P0051890 Psd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051891.1 MGP_WSBEiJ_G0024675.1 mouse_genomes_project 2 22082180 22083559 + Psd4 protein_coding retained_intron MGP_WSBEiJ_T0013308.1 MGP_WSBEiJ_G0011438.1 mouse_genomes_project 2 93134787 93135477 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051338.1 MGP_WSBEiJ_G0024580.1 mouse_genomes_project 2 1639959 1676425 - MGP_WSBEiJ_P0051338 Prpf18 protein_coding protein_coding MGP_WSBEiJ_T0051339.1 MGP_WSBEiJ_G0024580.1 mouse_genomes_project 2 1641835 1676445 - Prpf18 protein_coding processed_transcript MGP_WSBEiJ_T0051340.1 MGP_WSBEiJ_G0024580.1 mouse_genomes_project 2 1641926 1676452 - MGP_WSBEiJ_P0051340 Prpf18 protein_coding protein_coding MGP_WSBEiJ_T0051341.1 MGP_WSBEiJ_G0024580.1 mouse_genomes_project 2 1642344 1676320 - MGP_WSBEiJ_P0051341 Prpf18 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051342.1 MGP_WSBEiJ_G0024580.1 mouse_genomes_project 2 1658126 1676420 - MGP_WSBEiJ_P0051342 Prpf18 protein_coding protein_coding MGP_WSBEiJ_T0051343.1 MGP_WSBEiJ_G0024580.1 mouse_genomes_project 2 1658150 1676426 - Prpf18 protein_coding processed_transcript MGP_WSBEiJ_T0051344.1 MGP_WSBEiJ_G0024580.1 mouse_genomes_project 2 1668055 1676442 - Prpf18 protein_coding processed_transcript MGP_WSBEiJ_T0098100.1 MGP_WSBEiJ_G0036763.1 mouse_genomes_project 2 47175245 47175365 - Gm25338 snRNA snRNA MGP_WSBEiJ_T0058082.1 MGP_WSBEiJ_G0026104.1 mouse_genomes_project 2 168637745 168648279 + MGP_WSBEiJ_P0058082 Pigt protein_coding protein_coding MGP_WSBEiJ_T0058083.1 MGP_WSBEiJ_G0026104.1 mouse_genomes_project 2 168637760 168643296 + MGP_WSBEiJ_P0058083 Pigt protein_coding protein_coding MGP_WSBEiJ_T0058084.1 MGP_WSBEiJ_G0026104.1 mouse_genomes_project 2 168637771 168643573 + Pigt protein_coding retained_intron MGP_WSBEiJ_T0058085.1 MGP_WSBEiJ_G0026104.1 mouse_genomes_project 2 168637786 168648279 + MGP_WSBEiJ_P0058085 Pigt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058086.1 MGP_WSBEiJ_G0026104.1 mouse_genomes_project 2 168640140 168641830 + Pigt protein_coding retained_intron MGP_WSBEiJ_T0013069.1 MGP_WSBEiJ_G0011199.1 mouse_genomes_project 2 2348127 2348352 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003944.1 MGP_WSBEiJ_G0003512.1 mouse_genomes_project 2 77485247 77503675 + Gm13944 antisense antisense MGP_WSBEiJ_T0003945.1 MGP_WSBEiJ_G0003512.1 mouse_genomes_project 2 77485255 77504020 + Gm13944 antisense antisense MGP_WSBEiJ_T0057788.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161074320 161085744 + Rpn2 protein_coding processed_transcript MGP_WSBEiJ_T0057789.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161074362 161126881 + MGP_WSBEiJ_P0057789 Rpn2 protein_coding protein_coding MGP_WSBEiJ_T0057790.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161074449 161126881 + MGP_WSBEiJ_P0057790 Rpn2 protein_coding protein_coding MGP_WSBEiJ_T0057791.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161074729 161126618 + Rpn2 protein_coding processed_transcript MGP_WSBEiJ_T0057792.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161074872 161086894 + Rpn2 protein_coding processed_transcript MGP_WSBEiJ_T0057793.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161078195 161086775 + Rpn2 protein_coding processed_transcript MGP_WSBEiJ_T0057794.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161079750 161126297 + Rpn2 protein_coding processed_transcript MGP_WSBEiJ_T0057795.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161091036 161091548 + Rpn2 protein_coding processed_transcript MGP_WSBEiJ_T0057796.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161111879 161113538 + Rpn2 protein_coding processed_transcript MGP_WSBEiJ_T0057797.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161113506 161123055 + Rpn2 protein_coding retained_intron MGP_WSBEiJ_T0057798.1 MGP_WSBEiJ_G0026028.1 mouse_genomes_project 2 161120347 161122744 + Rpn2 protein_coding retained_intron MGP_WSBEiJ_T0055607.1 MGP_WSBEiJ_G0025512.1 mouse_genomes_project 2 112975593 112976647 + MGP_WSBEiJ_P0055607 protein_coding protein_coding MGP_WSBEiJ_T0053444.1 MGP_WSBEiJ_G0024930.1 mouse_genomes_project 2 34916216 34917155 + MGP_WSBEiJ_P0053444 Olfr340 protein_coding protein_coding MGP_WSBEiJ_T0054786.1 MGP_WSBEiJ_G0025276.1 mouse_genomes_project 2 88230502 88233134 - MGP_WSBEiJ_P0054786 Olfr1128 protein_coding protein_coding MGP_WSBEiJ_T0097203.1 MGP_WSBEiJ_G0035884.1 mouse_genomes_project 2 50406777 50406905 - Gm23505 scaRNA scaRNA MGP_WSBEiJ_T0052177.1 MGP_WSBEiJ_G0024721.1 mouse_genomes_project 2 23331324 23339526 - MGP_WSBEiJ_P0052177 Mamdc4 protein_coding protein_coding MGP_WSBEiJ_T0052178.1 MGP_WSBEiJ_G0024721.1 mouse_genomes_project 2 23331346 23339568 - MGP_WSBEiJ_P0052178 Mamdc4 protein_coding protein_coding MGP_WSBEiJ_T0052179.1 MGP_WSBEiJ_G0024721.1 mouse_genomes_project 2 23331519 23338464 - MGP_WSBEiJ_P0052179 Mamdc4 protein_coding protein_coding MGP_WSBEiJ_T0052180.1 MGP_WSBEiJ_G0024721.1 mouse_genomes_project 2 23336666 23337695 - Mamdc4 protein_coding processed_transcript MGP_WSBEiJ_T0052181.1 MGP_WSBEiJ_G0024721.1 mouse_genomes_project 2 23336710 23337325 - Mamdc4 protein_coding processed_transcript MGP_WSBEiJ_T0052182.1 MGP_WSBEiJ_G0024721.1 mouse_genomes_project 2 23338383 23343052 - Mamdc4 protein_coding processed_transcript MGP_WSBEiJ_T0007215.1 MGP_WSBEiJ_G0005918.1 mouse_genomes_project 2 130711452 130726767 + Gm14009 lincRNA lincRNA MGP_WSBEiJ_T0003839.1 MGP_WSBEiJ_G0003434.1 mouse_genomes_project 2 22916672 22919231 - Gm38287 antisense antisense MGP_WSBEiJ_T0058021.1 MGP_WSBEiJ_G0026079.1 mouse_genomes_project 2 167935946 167943148 + MGP_WSBEiJ_P0058021 Kcnk15 protein_coding protein_coding MGP_WSBEiJ_T0058022.1 MGP_WSBEiJ_G0026079.1 mouse_genomes_project 2 167936028 167943952 + MGP_WSBEiJ_P0058022 Kcnk15 protein_coding protein_coding MGP_WSBEiJ_T0098105.1 MGP_WSBEiJ_G0036768.1 mouse_genomes_project 2 71235980 71236084 + Gm23253 snRNA snRNA MGP_WSBEiJ_T0058367.1 MGP_WSBEiJ_G0026166.1 mouse_genomes_project 2 172054217 172073186 - MGP_WSBEiJ_P0058367 Gm20431 protein_coding protein_coding MGP_WSBEiJ_T0058368.1 MGP_WSBEiJ_G0026166.1 mouse_genomes_project 2 172054847 172103873 - Gm20431 protein_coding processed_transcript MGP_WSBEiJ_T0058369.1 MGP_WSBEiJ_G0026166.1 mouse_genomes_project 2 172055355 172056797 - Gm20431 protein_coding retained_intron MGP_WSBEiJ_T0058370.1 MGP_WSBEiJ_G0026166.1 mouse_genomes_project 2 172065803 172073184 - Gm20431 protein_coding retained_intron MGP_WSBEiJ_T0100721.1 MGP_WSBEiJ_G0039179.1 mouse_genomes_project 2 88504833 88505771 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0058322.1 MGP_WSBEiJ_G0026156.1 mouse_genomes_project 2 171381702 171408697 - MGP_WSBEiJ_P0058322 Znfx1 protein_coding protein_coding MGP_WSBEiJ_T0058323.1 MGP_WSBEiJ_G0026156.1 mouse_genomes_project 2 171381708 171389408 - MGP_WSBEiJ_P0058323 Znfx1 protein_coding protein_coding MGP_WSBEiJ_T0058324.1 MGP_WSBEiJ_G0026156.1 mouse_genomes_project 2 171389943 171406107 - MGP_WSBEiJ_P0058324 Znfx1 protein_coding protein_coding MGP_WSBEiJ_T0058325.1 MGP_WSBEiJ_G0026156.1 mouse_genomes_project 2 171390028 171408399 - MGP_WSBEiJ_P0058325 Znfx1 protein_coding protein_coding MGP_WSBEiJ_T0058326.1 MGP_WSBEiJ_G0026156.1 mouse_genomes_project 2 171395109 171408322 - Znfx1 protein_coding retained_intron MGP_WSBEiJ_T0010323.1 MGP_WSBEiJ_G0008480.1 mouse_genomes_project 2 185538922 185538999 + Mir1a-1 miRNA miRNA MGP_WSBEiJ_T0056690.1 MGP_WSBEiJ_G0025771.1 mouse_genomes_project 2 133558163 133686320 + MGP_WSBEiJ_P0056690 Atrn protein_coding protein_coding MGP_WSBEiJ_T0056691.1 MGP_WSBEiJ_G0025771.1 mouse_genomes_project 2 133558169 133660455 + Atrn protein_coding retained_intron MGP_WSBEiJ_T0056692.1 MGP_WSBEiJ_G0025771.1 mouse_genomes_project 2 133558599 133587968 + Atrn protein_coding retained_intron MGP_WSBEiJ_T0056693.1 MGP_WSBEiJ_G0025771.1 mouse_genomes_project 2 133635340 133648728 + Atrn protein_coding retained_intron MGP_WSBEiJ_T0056694.1 MGP_WSBEiJ_G0025771.1 mouse_genomes_project 2 133650321 133660483 + Atrn protein_coding retained_intron MGP_WSBEiJ_T0013315.1 MGP_WSBEiJ_G0011445.1 mouse_genomes_project 2 97028880 97029040 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052027.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22983944 22994506 - MGP_WSBEiJ_P0052027 Ndor1 protein_coding protein_coding MGP_WSBEiJ_T0052028.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22983985 22994509 - MGP_WSBEiJ_P0052028 Ndor1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052029.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22984692 22987109 - Ndor1 protein_coding processed_transcript MGP_WSBEiJ_T0052030.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22986351 22994532 - MGP_WSBEiJ_P0052030 Ndor1 protein_coding protein_coding MGP_WSBEiJ_T0052031.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22986550 22994509 - MGP_WSBEiJ_P0052031 Ndor1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052032.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22986709 22987594 - Ndor1 protein_coding retained_intron MGP_WSBEiJ_T0052033.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22988594 22994469 - MGP_WSBEiJ_P0052033 Ndor1 protein_coding protein_coding MGP_WSBEiJ_T0052034.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22988622 22989465 - Ndor1 protein_coding retained_intron MGP_WSBEiJ_T0052035.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22989246 22994539 - MGP_WSBEiJ_P0052035 Ndor1 protein_coding protein_coding MGP_WSBEiJ_T0052036.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22989297 22994491 - Ndor1 protein_coding processed_transcript MGP_WSBEiJ_T0052037.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22990610 22994384 - Ndor1 protein_coding retained_intron MGP_WSBEiJ_T0052038.1 MGP_WSBEiJ_G0024697.1 mouse_genomes_project 2 22990870 22995145 - MGP_WSBEiJ_P0052038 Ndor1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099347.1 MGP_WSBEiJ_G0038010.1 mouse_genomes_project 2 38759986 38760112 + Gm24467 snoRNA snoRNA MGP_WSBEiJ_T0057892.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162688263 162753895 + MGP_WSBEiJ_P0057892 Dhx35 protein_coding protein_coding MGP_WSBEiJ_T0057893.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162688263 162753895 + MGP_WSBEiJ_P0057893 Dhx35 protein_coding protein_coding MGP_WSBEiJ_T0057894.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162688318 162753895 + Dhx35 protein_coding processed_transcript MGP_WSBEiJ_T0057895.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162688321 162742666 + Dhx35 protein_coding retained_intron MGP_WSBEiJ_T0057896.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162688341 162725311 + MGP_WSBEiJ_P0057896 Dhx35 protein_coding protein_coding MGP_WSBEiJ_T0057897.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162688347 162714102 + Dhx35 protein_coding processed_transcript MGP_WSBEiJ_T0057898.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162689380 162695018 + Dhx35 protein_coding processed_transcript MGP_WSBEiJ_T0057899.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162723134 162730689 + Dhx35 protein_coding processed_transcript MGP_WSBEiJ_T0057900.1 MGP_WSBEiJ_G0026050.1 mouse_genomes_project 2 162746343 162753045 + Dhx35 protein_coding processed_transcript MGP_WSBEiJ_T0013194.1 MGP_WSBEiJ_G0011324.1 mouse_genomes_project 2 53310475 53311950 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051349.1 MGP_WSBEiJ_G0024582.1 mouse_genomes_project 2 1919542 1951979 + MGP_WSBEiJ_P0051349 Sephs1 protein_coding protein_coding MGP_WSBEiJ_T0051350.1 MGP_WSBEiJ_G0024582.1 mouse_genomes_project 2 1920222 1949559 + MGP_WSBEiJ_P0051350 Sephs1 protein_coding protein_coding MGP_WSBEiJ_T0051351.1 MGP_WSBEiJ_G0024582.1 mouse_genomes_project 2 1922034 1928567 + Sephs1 protein_coding processed_transcript MGP_WSBEiJ_T0051352.1 MGP_WSBEiJ_G0024582.1 mouse_genomes_project 2 1922361 1946955 + Sephs1 protein_coding processed_transcript MGP_WSBEiJ_T0057276.1 MGP_WSBEiJ_G0025926.1 mouse_genomes_project 2 156259564 156270384 + MGP_WSBEiJ_P0057276 Cox4i2 protein_coding protein_coding MGP_WSBEiJ_T0057277.1 MGP_WSBEiJ_G0025926.1 mouse_genomes_project 2 156260485 156270381 + MGP_WSBEiJ_P0057277 Cox4i2 protein_coding protein_coding MGP_WSBEiJ_T0010188.1 MGP_WSBEiJ_G0008345.1 mouse_genomes_project 2 7820342 7820470 + miRNA miRNA MGP_WSBEiJ_T0055207.1 MGP_WSBEiJ_G0025421.1 mouse_genomes_project 2 93232884 93264299 - MGP_WSBEiJ_P0055207 Cry2 protein_coding protein_coding MGP_WSBEiJ_T0055208.1 MGP_WSBEiJ_G0025421.1 mouse_genomes_project 2 93240486 93264292 - MGP_WSBEiJ_P0055208 Cry2 protein_coding protein_coding MGP_WSBEiJ_T0055209.1 MGP_WSBEiJ_G0025421.1 mouse_genomes_project 2 93254380 93264292 - Cry2 protein_coding processed_transcript MGP_WSBEiJ_T0055210.1 MGP_WSBEiJ_G0025421.1 mouse_genomes_project 2 93256130 93261597 - Cry2 protein_coding processed_transcript MGP_WSBEiJ_T0056616.1 MGP_WSBEiJ_G0025753.1 mouse_genomes_project 2 132916141 132989754 + MGP_WSBEiJ_P0056616 Ebf4 protein_coding protein_coding MGP_WSBEiJ_T0056617.1 MGP_WSBEiJ_G0025753.1 mouse_genomes_project 2 132916906 132989754 + Ebf4 protein_coding retained_intron MGP_WSBEiJ_T0056618.1 MGP_WSBEiJ_G0025753.1 mouse_genomes_project 2 132916906 132989754 + MGP_WSBEiJ_P0056618 Ebf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056619.1 MGP_WSBEiJ_G0025753.1 mouse_genomes_project 2 132916906 132989754 + MGP_WSBEiJ_P0056619 Ebf4 protein_coding protein_coding MGP_WSBEiJ_T0056620.1 MGP_WSBEiJ_G0025753.1 mouse_genomes_project 2 132916906 132989754 + MGP_WSBEiJ_P0056620 Ebf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056621.1 MGP_WSBEiJ_G0025753.1 mouse_genomes_project 2 132916906 132989754 + MGP_WSBEiJ_P0056621 Ebf4 protein_coding protein_coding MGP_WSBEiJ_T0013132.1 MGP_WSBEiJ_G0011262.1 mouse_genomes_project 2 29067940 29068320 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013291.1 MGP_WSBEiJ_G0011421.1 mouse_genomes_project 2 87979945 87980177 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056328.1 MGP_WSBEiJ_G0025683.1 mouse_genomes_project 2 127914337 127917130 + MGP_WSBEiJ_P0056328 Gm9913 protein_coding protein_coding MGP_WSBEiJ_T0003975.1 MGP_WSBEiJ_G0003531.1 mouse_genomes_project 2 115440239 115460034 - 4930533B01Rik antisense antisense MGP_WSBEiJ_T0013307.1 MGP_WSBEiJ_G0011437.1 mouse_genomes_project 2 93050290 93050623 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013243.1 MGP_WSBEiJ_G0011373.1 mouse_genomes_project 2 72375825 72376167 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056703.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133707996 133711442 - Adam33 protein_coding retained_intron MGP_WSBEiJ_T0056704.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133708222 133721360 - MGP_WSBEiJ_P0056704 Adam33 protein_coding protein_coding MGP_WSBEiJ_T0056705.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133708230 133721115 - Adam33 protein_coding retained_intron MGP_WSBEiJ_T0056706.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133708268 133713771 - MGP_WSBEiJ_P0056706 Adam33 protein_coding protein_coding MGP_WSBEiJ_T0056707.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133708280 133721091 - MGP_WSBEiJ_P0056707 Adam33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056708.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133708514 133721360 - MGP_WSBEiJ_P0056708 Adam33 protein_coding protein_coding MGP_WSBEiJ_T0056709.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133708515 133713885 - Adam33 protein_coding retained_intron MGP_WSBEiJ_T0056710.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133710447 133711932 - MGP_WSBEiJ_P0056710 Adam33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056711.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133710495 133711922 - Adam33 protein_coding processed_transcript MGP_WSBEiJ_T0056712.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133710626 133711465 - Adam33 protein_coding processed_transcript MGP_WSBEiJ_T0056713.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133710927 133711935 - Adam33 protein_coding retained_intron MGP_WSBEiJ_T0056714.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133715056 133721059 - MGP_WSBEiJ_P0056714 Adam33 protein_coding protein_coding MGP_WSBEiJ_T0056715.1 MGP_WSBEiJ_G0025773.1 mouse_genomes_project 2 133719575 133721089 - Adam33 protein_coding retained_intron MGP_WSBEiJ_T0013394.1 MGP_WSBEiJ_G0011524.1 mouse_genomes_project 2 133532353 133533621 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053982.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64461987 64620170 - MGP_WSBEiJ_P0053982 Cobll1 protein_coding protein_coding MGP_WSBEiJ_T0053983.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64461998 64620170 - MGP_WSBEiJ_P0053983 Cobll1 protein_coding protein_coding MGP_WSBEiJ_T0053984.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64461998 64620170 - MGP_WSBEiJ_P0053984 Cobll1 protein_coding protein_coding MGP_WSBEiJ_T0053985.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64461998 64620265 - MGP_WSBEiJ_P0053985 Cobll1 protein_coding protein_coding MGP_WSBEiJ_T0053986.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64461998 64620117 - MGP_WSBEiJ_P0053986 Cobll1 protein_coding protein_coding MGP_WSBEiJ_T0053987.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64472775 64480563 - Cobll1 protein_coding processed_transcript MGP_WSBEiJ_T0053988.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64501901 64620588 - MGP_WSBEiJ_P0053988 Cobll1 protein_coding protein_coding MGP_WSBEiJ_T0053989.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64509669 64620640 - MGP_WSBEiJ_P0053989 Cobll1 protein_coding protein_coding MGP_WSBEiJ_T0053990.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64512265 64616041 - Cobll1 protein_coding processed_transcript MGP_WSBEiJ_T0053991.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64512298 64620117 - MGP_WSBEiJ_P0053991 Cobll1 protein_coding protein_coding MGP_WSBEiJ_T0053992.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64525094 64620591 - Cobll1 protein_coding processed_transcript MGP_WSBEiJ_T0053993.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64527651 64620947 - Cobll1 protein_coding processed_transcript MGP_WSBEiJ_T0053994.1 MGP_WSBEiJ_G0025041.1 mouse_genomes_project 2 64527815 64620018 - Cobll1 protein_coding processed_transcript MGP_WSBEiJ_T0054302.1 MGP_WSBEiJ_G0025102.1 mouse_genomes_project 2 73289841 73396237 - MGP_WSBEiJ_P0054302 Wipf1 protein_coding protein_coding MGP_WSBEiJ_T0054303.1 MGP_WSBEiJ_G0025102.1 mouse_genomes_project 2 73290272 73348584 - MGP_WSBEiJ_P0054303 Wipf1 protein_coding protein_coding MGP_WSBEiJ_T0054304.1 MGP_WSBEiJ_G0025102.1 mouse_genomes_project 2 73292371 73315807 - MGP_WSBEiJ_P0054304 Wipf1 protein_coding protein_coding MGP_WSBEiJ_T0054305.1 MGP_WSBEiJ_G0025102.1 mouse_genomes_project 2 73298720 73349289 - MGP_WSBEiJ_P0054305 Wipf1 protein_coding protein_coding MGP_WSBEiJ_T0054306.1 MGP_WSBEiJ_G0025102.1 mouse_genomes_project 2 73305733 73314538 - MGP_WSBEiJ_P0054306 Wipf1 protein_coding protein_coding MGP_WSBEiJ_T0054307.1 MGP_WSBEiJ_G0025102.1 mouse_genomes_project 2 73305793 73395982 - Wipf1 protein_coding processed_transcript MGP_WSBEiJ_T0054308.1 MGP_WSBEiJ_G0025102.1 mouse_genomes_project 2 73308894 73395885 - Wipf1 protein_coding processed_transcript MGP_WSBEiJ_T0057685.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 159924032 159981927 + MGP_WSBEiJ_P0057685 Phf20 protein_coding protein_coding MGP_WSBEiJ_T0057686.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 159924208 160039626 + MGP_WSBEiJ_P0057686 Phf20 protein_coding protein_coding MGP_WSBEiJ_T0057687.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 159924300 160039624 + Phf20 protein_coding processed_transcript MGP_WSBEiJ_T0057688.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 159924320 159952711 + Phf20 protein_coding retained_intron MGP_WSBEiJ_T0057689.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 159924322 159982129 + Phf20 protein_coding retained_intron MGP_WSBEiJ_T0057690.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 159951676 159979444 + Phf20 protein_coding processed_transcript MGP_WSBEiJ_T0057691.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 159991429 160001491 + Phf20 protein_coding processed_transcript MGP_WSBEiJ_T0057692.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 160010770 160020632 + Phf20 protein_coding processed_transcript MGP_WSBEiJ_T0057693.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 160021852 160026809 + Phf20 protein_coding retained_intron MGP_WSBEiJ_T0057694.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 160024137 160026901 + Phf20 protein_coding processed_transcript MGP_WSBEiJ_T0057695.1 MGP_WSBEiJ_G0026010.1 mouse_genomes_project 2 160024513 160033336 + Phf20 protein_coding processed_transcript MGP_WSBEiJ_T0055526.1 MGP_WSBEiJ_G0025483.1 mouse_genomes_project 2 107132563 107336457 - MGP_WSBEiJ_P0055526 Elp4 protein_coding protein_coding MGP_WSBEiJ_T0055527.1 MGP_WSBEiJ_G0025483.1 mouse_genomes_project 2 107166534 107297857 - MGP_WSBEiJ_P0055527 Elp4 protein_coding protein_coding MGP_WSBEiJ_T0055528.1 MGP_WSBEiJ_G0025483.1 mouse_genomes_project 2 107231938 107255617 - Elp4 protein_coding retained_intron MGP_WSBEiJ_T0100706.1 MGP_WSBEiJ_G0039164.1 mouse_genomes_project 2 86426037 86427379 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097308.1 MGP_WSBEiJ_G0035983.1 mouse_genomes_project 2 1081767 1085115 + Gm10862 sense_intronic sense_intronic MGP_WSBEiJ_T0013490.1 MGP_WSBEiJ_G0011620.1 mouse_genomes_project 2 169907296 169907657 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054274.1 MGP_WSBEiJ_G0025095.1 mouse_genomes_project 2 72765957 72811135 - MGP_WSBEiJ_P0054274 protein_coding protein_coding MGP_WSBEiJ_T0054275.1 MGP_WSBEiJ_G0025095.1 mouse_genomes_project 2 72766178 72811115 - MGP_WSBEiJ_P0054275 protein_coding protein_coding MGP_WSBEiJ_T0054276.1 MGP_WSBEiJ_G0025095.1 mouse_genomes_project 2 72766182 72810317 - protein_coding processed_transcript MGP_WSBEiJ_T0054277.1 MGP_WSBEiJ_G0025095.1 mouse_genomes_project 2 72769382 72772184 - protein_coding processed_transcript MGP_WSBEiJ_T0054278.1 MGP_WSBEiJ_G0025095.1 mouse_genomes_project 2 72778753 72801480 - protein_coding processed_transcript MGP_WSBEiJ_T0013338.1 MGP_WSBEiJ_G0011468.1 mouse_genomes_project 2 105930659 105931488 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013263.1 MGP_WSBEiJ_G0011393.1 mouse_genomes_project 2 79622940 79623471 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007077.1 MGP_WSBEiJ_G0005806.1 mouse_genomes_project 2 33940853 33943329 + Gm35202 lincRNA lincRNA MGP_WSBEiJ_T0010245.1 MGP_WSBEiJ_G0008402.1 mouse_genomes_project 2 37108633 37108759 - Gm27634 miRNA miRNA MGP_WSBEiJ_T0013173.1 MGP_WSBEiJ_G0011303.1 mouse_genomes_project 2 45172936 45173286 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001032.1 MGP_WSBEiJ_G0000967.1 mouse_genomes_project 2 33686391 33687991 + TEC TEC MGP_WSBEiJ_T0013360.1 MGP_WSBEiJ_G0011490.1 mouse_genomes_project 2 113457111 113462813 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003948.1 MGP_WSBEiJ_G0003515.1 mouse_genomes_project 2 85579321 85613112 + Gm13713 antisense antisense MGP_WSBEiJ_T0003949.1 MGP_WSBEiJ_G0003515.1 mouse_genomes_project 2 85579321 85592506 + Gm13713 antisense antisense MGP_WSBEiJ_T0054457.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 77932208 78101256 - MGP_WSBEiJ_P0054457 protein_coding protein_coding MGP_WSBEiJ_T0054458.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 77994718 78054778 - protein_coding processed_transcript MGP_WSBEiJ_T0054459.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 77994718 78101259 - MGP_WSBEiJ_P0054459 protein_coding protein_coding MGP_WSBEiJ_T0054460.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 77994718 78101451 - MGP_WSBEiJ_P0054460 protein_coding protein_coding MGP_WSBEiJ_T0054461.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 77994718 78101429 - MGP_WSBEiJ_P0054461 protein_coding protein_coding MGP_WSBEiJ_T0054462.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 77994718 78101429 - MGP_WSBEiJ_P0054462 protein_coding protein_coding MGP_WSBEiJ_T0054463.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 78012071 78016062 - protein_coding processed_transcript MGP_WSBEiJ_T0054464.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 78057772 78101259 - protein_coding processed_transcript MGP_WSBEiJ_T0054465.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 78063471 78100224 - MGP_WSBEiJ_P0054465 protein_coding protein_coding MGP_WSBEiJ_T0054466.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 78063557 78101265 - MGP_WSBEiJ_P0054466 protein_coding protein_coding MGP_WSBEiJ_T0054467.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 78063613 78083068 - protein_coding processed_transcript MGP_WSBEiJ_T0054468.1 MGP_WSBEiJ_G0025137.1 mouse_genomes_project 2 78064959 78083126 - protein_coding processed_transcript MGP_WSBEiJ_T0054687.1 MGP_WSBEiJ_G0025189.1 mouse_genomes_project 2 85946425 85987935 - MGP_WSBEiJ_P0054687 4833423E24Rik protein_coding protein_coding MGP_WSBEiJ_T0013161.1 MGP_WSBEiJ_G0011291.1 mouse_genomes_project 2 38077121 38078218 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013310.1 MGP_WSBEiJ_G0011440.1 mouse_genomes_project 2 94699756 94700267 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055637.1 MGP_WSBEiJ_G0025539.1 mouse_genomes_project 2 113977130 114116406 + MGP_WSBEiJ_P0055637 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054403.1 MGP_WSBEiJ_G0025131.1 mouse_genomes_project 2 76656637 76666662 - MGP_WSBEiJ_P0054403 Fkbp7 protein_coding protein_coding MGP_WSBEiJ_T0054404.1 MGP_WSBEiJ_G0025131.1 mouse_genomes_project 2 76656656 76658837 - Fkbp7 protein_coding processed_transcript MGP_WSBEiJ_T0054405.1 MGP_WSBEiJ_G0025131.1 mouse_genomes_project 2 76659300 76666708 - MGP_WSBEiJ_P0054405 Fkbp7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054406.1 MGP_WSBEiJ_G0025131.1 mouse_genomes_project 2 76664953 76666677 - Fkbp7 protein_coding retained_intron MGP_WSBEiJ_T0058744.1 MGP_WSBEiJ_G0026262.1 mouse_genomes_project 2 186422450 186425291 + MGP_WSBEiJ_P0058744 BC051628 protein_coding protein_coding MGP_WSBEiJ_T0058745.1 MGP_WSBEiJ_G0026262.1 mouse_genomes_project 2 186422474 186424886 + MGP_WSBEiJ_P0058745 BC051628 protein_coding protein_coding MGP_WSBEiJ_T0053711.1 MGP_WSBEiJ_G0024994.1 mouse_genomes_project 2 50891013 50919152 - MGP_WSBEiJ_P0053711 Nmi protein_coding protein_coding MGP_WSBEiJ_T0053712.1 MGP_WSBEiJ_G0024994.1 mouse_genomes_project 2 50891027 50918934 - MGP_WSBEiJ_P0053712 Nmi protein_coding protein_coding MGP_WSBEiJ_T0053713.1 MGP_WSBEiJ_G0024994.1 mouse_genomes_project 2 50891031 50918946 - MGP_WSBEiJ_P0053713 Nmi protein_coding protein_coding MGP_WSBEiJ_T0053714.1 MGP_WSBEiJ_G0024994.1 mouse_genomes_project 2 50891051 50895090 - MGP_WSBEiJ_P0053714 Nmi protein_coding protein_coding MGP_WSBEiJ_T0053715.1 MGP_WSBEiJ_G0024994.1 mouse_genomes_project 2 50900401 50919409 - MGP_WSBEiJ_P0053715 Nmi protein_coding protein_coding MGP_WSBEiJ_T0053716.1 MGP_WSBEiJ_G0024994.1 mouse_genomes_project 2 50904681 50918902 - Nmi protein_coding retained_intron MGP_WSBEiJ_T0017216.1 MGP_WSBEiJ_G0014863.1 mouse_genomes_project 2 91755339 91765063 - Gm13778 processed_transcript processed_transcript MGP_WSBEiJ_T0017217.1 MGP_WSBEiJ_G0014863.1 mouse_genomes_project 2 91755642 91765078 - Gm13778 processed_transcript processed_transcript MGP_WSBEiJ_T0010283.1 MGP_WSBEiJ_G0008440.1 mouse_genomes_project 2 123065286 123065363 - Gm44325 miRNA miRNA MGP_WSBEiJ_T0013379.1 MGP_WSBEiJ_G0011509.1 mouse_genomes_project 2 123888097 123888776 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013435.1 MGP_WSBEiJ_G0011565.1 mouse_genomes_project 2 150401790 150402591 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056181.1 MGP_WSBEiJ_G0025645.1 mouse_genomes_project 2 123561254 123566383 + MGP_WSBEiJ_P0056181 protein_coding protein_coding MGP_WSBEiJ_T0056182.1 MGP_WSBEiJ_G0025645.1 mouse_genomes_project 2 123561427 123565968 + protein_coding retained_intron MGP_WSBEiJ_T0056183.1 MGP_WSBEiJ_G0025645.1 mouse_genomes_project 2 123561471 123571658 + MGP_WSBEiJ_P0056183 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056184.1 MGP_WSBEiJ_G0025645.1 mouse_genomes_project 2 123561471 123571660 + MGP_WSBEiJ_P0056184 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013342.1 MGP_WSBEiJ_G0011472.1 mouse_genomes_project 2 106264215 106264559 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003829.1 MGP_WSBEiJ_G0003424.1 mouse_genomes_project 2 15118006 15118949 + Gm13324 antisense antisense MGP_WSBEiJ_T0013201.1 MGP_WSBEiJ_G0011331.1 mouse_genomes_project 2 56335087 56335276 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052278.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24164581 24192044 + MGP_WSBEiJ_P0052278 Gpsm1 protein_coding protein_coding MGP_WSBEiJ_T0052279.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24164658 24192044 + MGP_WSBEiJ_P0052279 Gpsm1 protein_coding protein_coding MGP_WSBEiJ_T0052280.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24168837 24192044 + MGP_WSBEiJ_P0052280 Gpsm1 protein_coding protein_coding MGP_WSBEiJ_T0052281.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24172656 24192044 + MGP_WSBEiJ_P0052281 Gpsm1 protein_coding protein_coding MGP_WSBEiJ_T0052282.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24174398 24176752 + Gpsm1 protein_coding processed_transcript MGP_WSBEiJ_T0052283.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24174909 24184257 + Gpsm1 protein_coding processed_transcript MGP_WSBEiJ_T0052284.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24175099 24183727 + Gpsm1 protein_coding processed_transcript MGP_WSBEiJ_T0052285.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24179456 24192044 + MGP_WSBEiJ_P0052285 Gpsm1 protein_coding protein_coding MGP_WSBEiJ_T0052286.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24179499 24184338 + MGP_WSBEiJ_P0052286 Gpsm1 protein_coding protein_coding MGP_WSBEiJ_T0052287.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24183237 24189138 + Gpsm1 protein_coding processed_transcript MGP_WSBEiJ_T0052288.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24183254 24188531 + Gpsm1 protein_coding processed_transcript MGP_WSBEiJ_T0052289.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24186095 24191082 + Gpsm1 protein_coding processed_transcript MGP_WSBEiJ_T0052290.1 MGP_WSBEiJ_G0024748.1 mouse_genomes_project 2 24188044 24190717 + Gpsm1 protein_coding processed_transcript MGP_WSBEiJ_T0055852.1 MGP_WSBEiJ_G0025590.1 mouse_genomes_project 2 121284785 121286857 - MGP_WSBEiJ_P0055852 Rhov protein_coding protein_coding MGP_WSBEiJ_T0001038.1 MGP_WSBEiJ_G0000973.1 mouse_genomes_project 2 36465624 36469576 - TEC TEC MGP_WSBEiJ_T0057538.1 MGP_WSBEiJ_G0025989.1 mouse_genomes_project 2 159406533 159435555 - MGP_WSBEiJ_P0057538 Edem2 protein_coding protein_coding MGP_WSBEiJ_T0057539.1 MGP_WSBEiJ_G0025989.1 mouse_genomes_project 2 159410904 159419622 - Edem2 protein_coding processed_transcript MGP_WSBEiJ_T0057540.1 MGP_WSBEiJ_G0025989.1 mouse_genomes_project 2 159414890 159417296 - Edem2 protein_coding retained_intron MGP_WSBEiJ_T0057541.1 MGP_WSBEiJ_G0025989.1 mouse_genomes_project 2 159415309 159422688 - Edem2 protein_coding retained_intron MGP_WSBEiJ_T0013408.1 MGP_WSBEiJ_G0011538.1 mouse_genomes_project 2 139280945 139281649 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055322.1 MGP_WSBEiJ_G0025444.1 mouse_genomes_project 2 102896568 102904378 + Traf6 protein_coding processed_transcript MGP_WSBEiJ_T0055323.1 MGP_WSBEiJ_G0025444.1 mouse_genomes_project 2 102896579 102919823 + MGP_WSBEiJ_P0055323 Traf6 protein_coding protein_coding MGP_WSBEiJ_T0055324.1 MGP_WSBEiJ_G0025444.1 mouse_genomes_project 2 102902357 102908235 + Traf6 protein_coding processed_transcript MGP_WSBEiJ_T0003838.1 MGP_WSBEiJ_G0003433.1 mouse_genomes_project 2 19008422 19039250 - Gm13327 antisense antisense MGP_WSBEiJ_T0054169.1 MGP_WSBEiJ_G0025078.1 mouse_genomes_project 2 70348320 70349181 - MGP_WSBEiJ_P0054169 Gm26558 protein_coding protein_coding MGP_WSBEiJ_T0055396.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105020833 105063202 - MGP_WSBEiJ_P0055396 Nat10 protein_coding protein_coding MGP_WSBEiJ_T0055397.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105020837 105063173 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055398.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105020837 105063173 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055399.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105020837 105063129 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055400.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105021238 105024007 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055401.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105021504 105063136 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055402.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105031400 105034072 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055403.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105031595 105032838 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055404.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105033917 105043510 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055405.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105039710 105063202 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055406.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105050252 105062858 - MGP_WSBEiJ_P0055406 Nat10 protein_coding protein_coding MGP_WSBEiJ_T0055407.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105053023 105063193 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055408.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105057010 105063127 - Nat10 protein_coding retained_intron MGP_WSBEiJ_T0055409.1 MGP_WSBEiJ_G0025459.1 mouse_genomes_project 2 105057147 105059630 - MGP_WSBEiJ_P0055409 Nat10 protein_coding protein_coding MGP_WSBEiJ_T0098081.1 MGP_WSBEiJ_G0036744.1 mouse_genomes_project 2 256138 256279 - Gm22005 snRNA snRNA MGP_WSBEiJ_T0001071.1 MGP_WSBEiJ_G0001005.1 mouse_genomes_project 2 174555865 174557038 - TEC TEC MGP_WSBEiJ_T0001072.1 MGP_WSBEiJ_G0001005.1 mouse_genomes_project 2 174555978 174556838 - TEC TEC MGP_WSBEiJ_T0054753.1 MGP_WSBEiJ_G0025251.1 mouse_genomes_project 2 87551099 87552038 - MGP_WSBEiJ_P0054753 Olfr1099 protein_coding protein_coding MGP_WSBEiJ_T0004060.1 MGP_WSBEiJ_G0003595.1 mouse_genomes_project 2 161922852 161945210 - 2010009K17Rik antisense antisense MGP_WSBEiJ_T0058043.1 MGP_WSBEiJ_G0026089.1 mouse_genomes_project 2 168328669 168336305 - MGP_WSBEiJ_P0058043 Wfdc15b protein_coding protein_coding MGP_WSBEiJ_T0058044.1 MGP_WSBEiJ_G0026089.1 mouse_genomes_project 2 168328669 168336276 - MGP_WSBEiJ_P0058044 Wfdc15b protein_coding protein_coding MGP_WSBEiJ_T0058045.1 MGP_WSBEiJ_G0026089.1 mouse_genomes_project 2 168328670 168329799 - MGP_WSBEiJ_P0058045 Wfdc15b protein_coding protein_coding MGP_WSBEiJ_T0054739.1 MGP_WSBEiJ_G0025238.1 mouse_genomes_project 2 87181167 87182349 - MGP_WSBEiJ_P0054739 protein_coding protein_coding MGP_WSBEiJ_T0097205.1 MGP_WSBEiJ_G0035886.1 mouse_genomes_project 2 108275802 108275926 + Gm22813 scaRNA scaRNA MGP_WSBEiJ_T0056082.1 MGP_WSBEiJ_G0025630.1 mouse_genomes_project 2 123137216 123180273 - MGP_WSBEiJ_P0056082 Tgm5 protein_coding protein_coding MGP_WSBEiJ_T0056083.1 MGP_WSBEiJ_G0025630.1 mouse_genomes_project 2 123165755 123180254 - Tgm5 protein_coding retained_intron MGP_WSBEiJ_T0007294.1 MGP_WSBEiJ_G0005984.1 mouse_genomes_project 2 172605734 172607645 - E130018N17Rik lincRNA lincRNA MGP_WSBEiJ_T0055581.1 MGP_WSBEiJ_G0025496.1 mouse_genomes_project 2 111849071 111902560 - MGP_WSBEiJ_P0055581 Bbox1 protein_coding protein_coding MGP_WSBEiJ_T0055582.1 MGP_WSBEiJ_G0025496.1 mouse_genomes_project 2 111883319 111910801 - MGP_WSBEiJ_P0055582 Bbox1 protein_coding protein_coding MGP_WSBEiJ_T0003848.1 MGP_WSBEiJ_G0003439.1 mouse_genomes_project 2 23883765 23885016 + Gm13554 antisense antisense MGP_WSBEiJ_T0010190.1 MGP_WSBEiJ_G0008347.1 mouse_genomes_project 2 7820931 7821975 + miRNA miRNA MGP_WSBEiJ_T0099404.1 MGP_WSBEiJ_G0038067.1 mouse_genomes_project 2 166788768 166788894 + Gm22936 snoRNA snoRNA MGP_WSBEiJ_T0013398.1 MGP_WSBEiJ_G0011528.1 mouse_genomes_project 2 134119784 134120301 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054839.1 MGP_WSBEiJ_G0025325.1 mouse_genomes_project 2 89738747 89739674 - MGP_WSBEiJ_P0054839 Olfr1208 protein_coding protein_coding MGP_WSBEiJ_T0013463.1 MGP_WSBEiJ_G0011593.1 mouse_genomes_project 2 159239900 159240191 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013438.1 MGP_WSBEiJ_G0011568.1 mouse_genomes_project 2 150668975 150669284 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007137.1 MGP_WSBEiJ_G0005856.1 mouse_genomes_project 2 75392671 75398491 - Gm13660 lincRNA lincRNA MGP_WSBEiJ_T0054504.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80108807 80405766 - MGP_WSBEiJ_P0054504 Pde1a protein_coding protein_coding MGP_WSBEiJ_T0054505.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80108808 80405661 - MGP_WSBEiJ_P0054505 Pde1a protein_coding protein_coding MGP_WSBEiJ_T0054506.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80108816 80405766 - MGP_WSBEiJ_P0054506 Pde1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054507.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80110916 80406285 - MGP_WSBEiJ_P0054507 Pde1a protein_coding protein_coding MGP_WSBEiJ_T0054508.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80130724 80179932 - MGP_WSBEiJ_P0054508 Pde1a protein_coding protein_coding MGP_WSBEiJ_T0054509.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80130724 80179898 - MGP_WSBEiJ_P0054509 Pde1a protein_coding protein_coding MGP_WSBEiJ_T0054510.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80130724 80179932 - MGP_WSBEiJ_P0054510 Pde1a protein_coding protein_coding MGP_WSBEiJ_T0054511.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80135275 80202296 - MGP_WSBEiJ_P0054511 Pde1a protein_coding protein_coding MGP_WSBEiJ_T0054512.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80177490 80315446 - Pde1a protein_coding processed_transcript MGP_WSBEiJ_T0054513.1 MGP_WSBEiJ_G0025144.1 mouse_genomes_project 2 80185869 80406285 - Pde1a protein_coding processed_transcript MGP_WSBEiJ_T0054793.1 MGP_WSBEiJ_G0025282.1 mouse_genomes_project 2 88419676 88420612 - MGP_WSBEiJ_P0054793 Olfr1138 protein_coding protein_coding MGP_WSBEiJ_T0052172.1 MGP_WSBEiJ_G0024720.1 mouse_genomes_project 2 23326056 23330292 + MGP_WSBEiJ_P0052172 Edf1 protein_coding protein_coding MGP_WSBEiJ_T0052173.1 MGP_WSBEiJ_G0024720.1 mouse_genomes_project 2 23326080 23329571 + Edf1 protein_coding processed_transcript MGP_WSBEiJ_T0052174.1 MGP_WSBEiJ_G0024720.1 mouse_genomes_project 2 23326106 23329474 + Edf1 protein_coding processed_transcript MGP_WSBEiJ_T0052175.1 MGP_WSBEiJ_G0024720.1 mouse_genomes_project 2 23326348 23330071 + Edf1 protein_coding processed_transcript MGP_WSBEiJ_T0052176.1 MGP_WSBEiJ_G0024720.1 mouse_genomes_project 2 23328794 23330292 + Edf1 protein_coding processed_transcript MGP_WSBEiJ_T0054360.1 MGP_WSBEiJ_G0025116.1 mouse_genomes_project 2 74600659 74617553 + Hoxd4 protein_coding processed_transcript MGP_WSBEiJ_T0054361.1 MGP_WSBEiJ_G0025116.1 mouse_genomes_project 2 74610663 74617844 + MGP_WSBEiJ_P0054361 Hoxd4 protein_coding protein_coding MGP_WSBEiJ_T0054363.1 MGP_WSBEiJ_G0025116.1 mouse_genomes_project 2 74615758 74617807 + MGP_WSBEiJ_P0054363 Hoxd4 protein_coding protein_coding MGP_WSBEiJ_T0013276.1 MGP_WSBEiJ_G0011406.1 mouse_genomes_project 2 83802200 83802902 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053650.1 MGP_WSBEiJ_G0024983.1 mouse_genomes_project 2 47612928 47700917 + MGP_WSBEiJ_P0053650 Acvr2a protein_coding protein_coding MGP_WSBEiJ_T0053651.1 MGP_WSBEiJ_G0024983.1 mouse_genomes_project 2 47688031 47697892 + Acvr2a protein_coding processed_transcript MGP_WSBEiJ_T0010220.1 MGP_WSBEiJ_G0008377.1 mouse_genomes_project 2 24316252 24316313 - Mir6996 miRNA miRNA MGP_WSBEiJ_T0057935.1 MGP_WSBEiJ_G0026058.1 mouse_genomes_project 2 164879309 164885190 - MGP_WSBEiJ_P0057935 Emilin3 protein_coding protein_coding MGP_WSBEiJ_T0057936.1 MGP_WSBEiJ_G0026058.1 mouse_genomes_project 2 164879310 164885201 - MGP_WSBEiJ_P0057936 Emilin3 protein_coding protein_coding MGP_WSBEiJ_T0003817.1 MGP_WSBEiJ_G0003414.1 mouse_genomes_project 2 3324664 3457698 + A230108P19Rik antisense antisense MGP_WSBEiJ_T0013196.1 MGP_WSBEiJ_G0011326.1 mouse_genomes_project 2 54330203 54331229 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013301.1 MGP_WSBEiJ_G0011431.1 mouse_genomes_project 2 90039313 90040120 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100683.1 MGP_WSBEiJ_G0039141.1 mouse_genomes_project 2 9269766 9281185 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0054851.1 MGP_WSBEiJ_G0025335.1 mouse_genomes_project 2 89945208 89946144 - MGP_WSBEiJ_P0054851 Olfr1220 protein_coding protein_coding MGP_WSBEiJ_T0058341.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814291 171873900 + MGP_WSBEiJ_P0058341 Slc9a8 protein_coding protein_coding MGP_WSBEiJ_T0058342.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814300 171871530 + MGP_WSBEiJ_P0058342 Slc9a8 protein_coding protein_coding MGP_WSBEiJ_T0058343.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814300 171873898 + MGP_WSBEiJ_P0058343 Slc9a8 protein_coding protein_coding MGP_WSBEiJ_T0058344.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814302 171818714 + Slc9a8 protein_coding retained_intron MGP_WSBEiJ_T0058345.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814309 171842523 + Slc9a8 protein_coding retained_intron MGP_WSBEiJ_T0058346.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814311 171873899 + Slc9a8 protein_coding processed_transcript MGP_WSBEiJ_T0058347.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814316 171829596 + Slc9a8 protein_coding retained_intron MGP_WSBEiJ_T0058348.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814317 171864643 + Slc9a8 protein_coding processed_transcript MGP_WSBEiJ_T0058349.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171814321 171873899 + Slc9a8 protein_coding processed_transcript MGP_WSBEiJ_T0058350.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171816698 171864670 + Slc9a8 protein_coding processed_transcript MGP_WSBEiJ_T0058351.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171847887 171864668 + Slc9a8 protein_coding processed_transcript MGP_WSBEiJ_T0058352.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171847976 171866011 + Slc9a8 protein_coding processed_transcript MGP_WSBEiJ_T0058353.1 MGP_WSBEiJ_G0026161.1 mouse_genomes_project 2 171848076 171873899 + Slc9a8 protein_coding processed_transcript MGP_WSBEiJ_T0056098.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123268474 123282977 + Tubgcp4 protein_coding processed_transcript MGP_WSBEiJ_T0056099.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123268988 123297261 + MGP_WSBEiJ_P0056099 Tubgcp4 protein_coding protein_coding MGP_WSBEiJ_T0056100.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123269029 123297260 + MGP_WSBEiJ_P0056100 Tubgcp4 protein_coding protein_coding MGP_WSBEiJ_T0056101.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123269035 123297261 + MGP_WSBEiJ_P0056101 Tubgcp4 protein_coding protein_coding MGP_WSBEiJ_T0056102.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123269060 123297260 + Tubgcp4 protein_coding retained_intron MGP_WSBEiJ_T0056103.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123269066 123274438 + Tubgcp4 protein_coding processed_transcript MGP_WSBEiJ_T0056104.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123269088 123292707 + MGP_WSBEiJ_P0056104 Tubgcp4 protein_coding protein_coding MGP_WSBEiJ_T0056105.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123269113 123283020 + Tubgcp4 protein_coding processed_transcript MGP_WSBEiJ_T0056106.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123269402 123285261 + Tubgcp4 protein_coding retained_intron MGP_WSBEiJ_T0056107.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123272184 123283023 + Tubgcp4 protein_coding processed_transcript MGP_WSBEiJ_T0056108.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123282159 123283350 + Tubgcp4 protein_coding retained_intron MGP_WSBEiJ_T0056109.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123285896 123295540 + Tubgcp4 protein_coding retained_intron MGP_WSBEiJ_T0056110.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123286641 123290951 + Tubgcp4 protein_coding retained_intron MGP_WSBEiJ_T0056111.1 MGP_WSBEiJ_G0025635.1 mouse_genomes_project 2 123290484 123294722 + Tubgcp4 protein_coding retained_intron MGP_WSBEiJ_T0054763.1 MGP_WSBEiJ_G0025261.1 mouse_genomes_project 2 87748436 87749375 - MGP_WSBEiJ_P0054763 Olfr1110 protein_coding protein_coding MGP_WSBEiJ_T0010278.1 MGP_WSBEiJ_G0008435.1 mouse_genomes_project 2 107419309 107419434 + Gm22002 miRNA miRNA MGP_WSBEiJ_T0057999.1 MGP_WSBEiJ_G0026074.1 mouse_genomes_project 2 167684010 167701081 + MGP_WSBEiJ_P0057999 Ttpal protein_coding protein_coding MGP_WSBEiJ_T0058000.1 MGP_WSBEiJ_G0026074.1 mouse_genomes_project 2 167684018 167698569 + MGP_WSBEiJ_P0058000 Ttpal protein_coding protein_coding MGP_WSBEiJ_T0058001.1 MGP_WSBEiJ_G0026074.1 mouse_genomes_project 2 167684045 167694922 + Ttpal protein_coding retained_intron MGP_WSBEiJ_T0058002.1 MGP_WSBEiJ_G0026074.1 mouse_genomes_project 2 167684045 167688966 + MGP_WSBEiJ_P0058002 Ttpal protein_coding protein_coding MGP_WSBEiJ_T0058003.1 MGP_WSBEiJ_G0026074.1 mouse_genomes_project 2 167684047 167701082 + MGP_WSBEiJ_P0058003 Ttpal protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058004.1 MGP_WSBEiJ_G0026074.1 mouse_genomes_project 2 167684259 167693966 + MGP_WSBEiJ_P0058004 Ttpal protein_coding protein_coding MGP_WSBEiJ_T0058005.1 MGP_WSBEiJ_G0026074.1 mouse_genomes_project 2 167693588 167697495 + Ttpal protein_coding retained_intron MGP_WSBEiJ_T0058573.1 MGP_WSBEiJ_G0026225.1 mouse_genomes_project 2 183489802 183500831 + MGP_WSBEiJ_P0058573 Fam217b protein_coding protein_coding MGP_WSBEiJ_T0058574.1 MGP_WSBEiJ_G0026225.1 mouse_genomes_project 2 183489860 183495595 + Fam217b protein_coding processed_transcript MGP_WSBEiJ_T0100751.1 MGP_WSBEiJ_G0039209.1 mouse_genomes_project 2 180045196 180048121 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0057021.1 MGP_WSBEiJ_G0025844.1 mouse_genomes_project 2 147787500 147960536 + MGP_WSBEiJ_P0057021 Dtd1 protein_coding protein_coding MGP_WSBEiJ_T0057022.1 MGP_WSBEiJ_G0025844.1 mouse_genomes_project 2 147804014 147960218 + Dtd1 protein_coding processed_transcript MGP_WSBEiJ_T0057023.1 MGP_WSBEiJ_G0025844.1 mouse_genomes_project 2 147868960 147941000 + Dtd1 protein_coding processed_transcript MGP_WSBEiJ_T0057024.1 MGP_WSBEiJ_G0025844.1 mouse_genomes_project 2 147926081 147960272 + Dtd1 protein_coding processed_transcript MGP_WSBEiJ_T0057025.1 MGP_WSBEiJ_G0025844.1 mouse_genomes_project 2 147932404 147960053 + Dtd1 protein_coding processed_transcript MGP_WSBEiJ_T0010302.1 MGP_WSBEiJ_G0008459.1 mouse_genomes_project 2 159322555 159322634 + Mir499 miRNA miRNA MGP_WSBEiJ_T0057092.1 MGP_WSBEiJ_G0025859.1 mouse_genomes_project 2 151335437 151338508 - MGP_WSBEiJ_P0057092 Foxa2 protein_coding protein_coding MGP_WSBEiJ_T0057093.1 MGP_WSBEiJ_G0025859.1 mouse_genomes_project 2 151335437 151339525 - MGP_WSBEiJ_P0057093 Foxa2 protein_coding protein_coding MGP_WSBEiJ_T0057094.1 MGP_WSBEiJ_G0025859.1 mouse_genomes_project 2 151336102 151339452 - MGP_WSBEiJ_P0057094 Foxa2 protein_coding protein_coding MGP_WSBEiJ_T0057095.1 MGP_WSBEiJ_G0025859.1 mouse_genomes_project 2 151336800 151338024 - Foxa2 protein_coding processed_transcript MGP_WSBEiJ_T0013441.1 MGP_WSBEiJ_G0011571.1 mouse_genomes_project 2 151368762 151369256 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010184.1 MGP_WSBEiJ_G0008341.1 mouse_genomes_project 2 7817040 7817167 + Gm26398 miRNA miRNA MGP_WSBEiJ_T0053461.1 MGP_WSBEiJ_G0024946.1 mouse_genomes_project 2 35381009 35381957 + MGP_WSBEiJ_P0053461 Olfr356 protein_coding protein_coding MGP_WSBEiJ_T0051875.1 MGP_WSBEiJ_G0024673.1 mouse_genomes_project 2 21961780 21964429 + MGP_WSBEiJ_P0051875 Il1f10 protein_coding protein_coding MGP_WSBEiJ_T0054286.1 MGP_WSBEiJ_G0025098.1 mouse_genomes_project 2 73125655 73131206 + MGP_WSBEiJ_P0054286 Sp9 protein_coding protein_coding MGP_WSBEiJ_T0017254.1 MGP_WSBEiJ_G0014881.1 mouse_genomes_project 2 121340167 121345128 - Gm14207 processed_transcript processed_transcript MGP_WSBEiJ_T0017255.1 MGP_WSBEiJ_G0014881.1 mouse_genomes_project 2 121340167 121344477 - Gm14207 processed_transcript processed_transcript MGP_WSBEiJ_T0017256.1 MGP_WSBEiJ_G0014881.1 mouse_genomes_project 2 121340319 121344498 - Gm14207 processed_transcript processed_transcript MGP_WSBEiJ_T0054766.1 MGP_WSBEiJ_G0025264.1 mouse_genomes_project 2 87828628 87829361 + MGP_WSBEiJ_P0054766 Olfr1115 protein_coding protein_coding MGP_WSBEiJ_T0100066.1 MGP_WSBEiJ_G0038683.1 mouse_genomes_project 2 163921817 163922265 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0055124.1 MGP_WSBEiJ_G0025409.1 mouse_genomes_project 2 92476122 92478910 + MGP_WSBEiJ_P0055124 Harbi1 protein_coding protein_coding MGP_WSBEiJ_T0055125.1 MGP_WSBEiJ_G0025409.1 mouse_genomes_project 2 92476123 92479308 + MGP_WSBEiJ_P0055125 Harbi1 protein_coding protein_coding MGP_WSBEiJ_T0055126.1 MGP_WSBEiJ_G0025409.1 mouse_genomes_project 2 92476187 92481925 + MGP_WSBEiJ_P0055126 Harbi1 protein_coding protein_coding MGP_WSBEiJ_T0055127.1 MGP_WSBEiJ_G0025409.1 mouse_genomes_project 2 92476192 92488041 + MGP_WSBEiJ_P0055127 Harbi1 protein_coding protein_coding MGP_WSBEiJ_T0055128.1 MGP_WSBEiJ_G0025409.1 mouse_genomes_project 2 92478777 92485783 + MGP_WSBEiJ_P0055128 Harbi1 protein_coding protein_coding MGP_WSBEiJ_T0100725.1 MGP_WSBEiJ_G0039183.1 mouse_genomes_project 2 88786647 88787598 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0056795.1 MGP_WSBEiJ_G0025792.1 mouse_genomes_project 2 134739859 134835531 - MGP_WSBEiJ_P0056795 Slc23a2 protein_coding protein_coding MGP_WSBEiJ_T0056796.1 MGP_WSBEiJ_G0025792.1 mouse_genomes_project 2 134742777 134744049 - Slc23a2 protein_coding processed_transcript MGP_WSBEiJ_T0056797.1 MGP_WSBEiJ_G0025792.1 mouse_genomes_project 2 134748071 134754448 - Slc23a2 protein_coding processed_transcript MGP_WSBEiJ_T0056798.1 MGP_WSBEiJ_G0025792.1 mouse_genomes_project 2 134762206 134835531 - Slc23a2 protein_coding processed_transcript MGP_WSBEiJ_T0056799.1 MGP_WSBEiJ_G0025792.1 mouse_genomes_project 2 134762978 134765217 - Slc23a2 protein_coding processed_transcript MGP_WSBEiJ_T0056800.1 MGP_WSBEiJ_G0025792.1 mouse_genomes_project 2 134776358 134781880 - Slc23a2 protein_coding processed_transcript MGP_WSBEiJ_T0056801.1 MGP_WSBEiJ_G0025792.1 mouse_genomes_project 2 134781474 134799700 - MGP_WSBEiJ_P0056801 Slc23a2 protein_coding protein_coding MGP_WSBEiJ_T0058386.1 MGP_WSBEiJ_G0026172.1 mouse_genomes_project 2 172634765 172684177 - MGP_WSBEiJ_P0058386 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057579.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159671872 159705798 + Cep250 protein_coding retained_intron MGP_WSBEiJ_T0057580.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159671977 159718068 + MGP_WSBEiJ_P0057580 Cep250 protein_coding protein_coding MGP_WSBEiJ_T0057581.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159671977 159718068 + MGP_WSBEiJ_P0057581 Cep250 protein_coding protein_coding MGP_WSBEiJ_T0057582.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159671977 159718068 + MGP_WSBEiJ_P0057582 Cep250 protein_coding protein_coding MGP_WSBEiJ_T0057583.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159671991 159692210 + MGP_WSBEiJ_P0057583 Cep250 protein_coding protein_coding MGP_WSBEiJ_T0057584.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159672013 159685730 + MGP_WSBEiJ_P0057584 Cep250 protein_coding protein_coding MGP_WSBEiJ_T0057586.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159694142 159718068 + Cep250 protein_coding retained_intron MGP_WSBEiJ_T0057587.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159697282 159699172 + Cep250 protein_coding retained_intron MGP_WSBEiJ_T0057588.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159705067 159708778 + MGP_WSBEiJ_P0057588 Cep250 protein_coding protein_coding MGP_WSBEiJ_T0057589.1 MGP_WSBEiJ_G0025999.1 mouse_genomes_project 2 159705099 159709771 + MGP_WSBEiJ_P0057589 Cep250 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013162.1 MGP_WSBEiJ_G0011292.1 mouse_genomes_project 2 38142879 38142999 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007179.1 MGP_WSBEiJ_G0005889.1 mouse_genomes_project 2 107466933 107468967 - Gm29053 lincRNA lincRNA MGP_WSBEiJ_T0017304.1 MGP_WSBEiJ_G0014905.1 mouse_genomes_project 2 161971268 161972012 + Gm20412 processed_transcript processed_transcript MGP_WSBEiJ_T0013427.1 MGP_WSBEiJ_G0011557.1 mouse_genomes_project 2 147950136 147952390 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013321.1 MGP_WSBEiJ_G0011451.1 mouse_genomes_project 2 101148261 101148445 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054862.1 MGP_WSBEiJ_G0025344.1 mouse_genomes_project 2 90116663 90117581 - MGP_WSBEiJ_P0054862 Olfr1230 protein_coding protein_coding MGP_WSBEiJ_T0017332.1 MGP_WSBEiJ_G0014918.1 mouse_genomes_project 2 179805429 179808022 - Gm14617 processed_transcript retained_intron MGP_WSBEiJ_T0017333.1 MGP_WSBEiJ_G0014918.1 mouse_genomes_project 2 179805556 179813318 - Gm14617 processed_transcript lincRNA MGP_WSBEiJ_T0017334.1 MGP_WSBEiJ_G0014918.1 mouse_genomes_project 2 179807444 179813195 - Gm14617 processed_transcript lincRNA MGP_WSBEiJ_T0053132.1 MGP_WSBEiJ_G0024880.1 mouse_genomes_project 2 30892134 30905425 + MGP_WSBEiJ_P0053132 Ak1 protein_coding protein_coding MGP_WSBEiJ_T0053133.1 MGP_WSBEiJ_G0024880.1 mouse_genomes_project 2 30895814 30905421 + MGP_WSBEiJ_P0053133 Ak1 protein_coding protein_coding MGP_WSBEiJ_T0053134.1 MGP_WSBEiJ_G0024880.1 mouse_genomes_project 2 30895815 30901541 + MGP_WSBEiJ_P0053134 Ak1 protein_coding protein_coding MGP_WSBEiJ_T0053135.1 MGP_WSBEiJ_G0024880.1 mouse_genomes_project 2 30898765 30901504 + MGP_WSBEiJ_P0053135 Ak1 protein_coding protein_coding MGP_WSBEiJ_T0053136.1 MGP_WSBEiJ_G0024880.1 mouse_genomes_project 2 30899879 30905419 + MGP_WSBEiJ_P0053136 Ak1 protein_coding protein_coding MGP_WSBEiJ_T0053137.1 MGP_WSBEiJ_G0024880.1 mouse_genomes_project 2 30899896 30903767 + Ak1 protein_coding retained_intron MGP_WSBEiJ_T0003955.1 MGP_WSBEiJ_G0003520.1 mouse_genomes_project 2 103274630 103302013 + Gm13919 antisense antisense MGP_WSBEiJ_T0003956.1 MGP_WSBEiJ_G0003520.1 mouse_genomes_project 2 103274638 103277249 + Gm13919 antisense antisense MGP_WSBEiJ_T0058038.1 MGP_WSBEiJ_G0026085.1 mouse_genomes_project 2 168276161 168283652 - MGP_WSBEiJ_P0058038 Kcns1 protein_coding protein_coding MGP_WSBEiJ_T0051690.1 MGP_WSBEiJ_G0024637.1 mouse_genomes_project 2 15567996 15568458 - MGP_WSBEiJ_P0051690 Gm14501 protein_coding protein_coding MGP_WSBEiJ_T0013133.1 MGP_WSBEiJ_G0011263.1 mouse_genomes_project 2 29739772 29740567 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099361.1 MGP_WSBEiJ_G0038024.1 mouse_genomes_project 2 66926324 66926456 + Gm23328 snoRNA snoRNA MGP_WSBEiJ_T0054702.1 MGP_WSBEiJ_G0025203.1 mouse_genomes_project 2 86324939 86325872 - MGP_WSBEiJ_P0054702 Olfr1019 protein_coding protein_coding MGP_WSBEiJ_T0055583.1 MGP_WSBEiJ_G0025497.1 mouse_genomes_project 2 111963412 111965679 - MGP_WSBEiJ_P0055583 Fibin protein_coding protein_coding MGP_WSBEiJ_T0007211.1 MGP_WSBEiJ_G0005914.1 mouse_genomes_project 2 126598492 126602869 - 4930583P06Rik lincRNA lincRNA MGP_WSBEiJ_T0051671.1 MGP_WSBEiJ_G0024634.1 mouse_genomes_project 2 13900338 14304057 + MGP_WSBEiJ_P0051671 Plxdc2 protein_coding protein_coding MGP_WSBEiJ_T0051672.1 MGP_WSBEiJ_G0024634.1 mouse_genomes_project 2 13900921 14299907 + MGP_WSBEiJ_P0051672 Plxdc2 protein_coding protein_coding MGP_WSBEiJ_T0051673.1 MGP_WSBEiJ_G0024634.1 mouse_genomes_project 2 13901151 14300075 + MGP_WSBEiJ_P0051673 Plxdc2 protein_coding protein_coding MGP_WSBEiJ_T0051674.1 MGP_WSBEiJ_G0024634.1 mouse_genomes_project 2 14180903 14299908 + Plxdc2 protein_coding processed_transcript MGP_WSBEiJ_T0007205.1 MGP_WSBEiJ_G0005910.1 mouse_genomes_project 2 120232604 120238558 - A930104D05Rik lincRNA lincRNA MGP_WSBEiJ_T0007206.1 MGP_WSBEiJ_G0005910.1 mouse_genomes_project 2 120235394 120238390 - A930104D05Rik lincRNA lincRNA MGP_WSBEiJ_T0056429.1 MGP_WSBEiJ_G0025705.1 mouse_genomes_project 2 129667526 129690567 - MGP_WSBEiJ_P0056429 1810024B03Rik protein_coding protein_coding MGP_WSBEiJ_T0056430.1 MGP_WSBEiJ_G0025705.1 mouse_genomes_project 2 129683779 129690541 - 1810024B03Rik protein_coding processed_transcript MGP_WSBEiJ_T0003970.1 MGP_WSBEiJ_G0003527.1 mouse_genomes_project 2 111621557 111640578 - Ccdc34os antisense antisense MGP_WSBEiJ_T0003971.1 MGP_WSBEiJ_G0003527.1 mouse_genomes_project 2 111621558 111640581 - Ccdc34os antisense antisense MGP_WSBEiJ_T0003942.1 MGP_WSBEiJ_G0003510.1 mouse_genomes_project 2 75070791 75255045 + 2600014E21Rik antisense antisense MGP_WSBEiJ_T0052948.1 MGP_WSBEiJ_G0024853.1 mouse_genomes_project 2 29863748 29875175 + MGP_WSBEiJ_P0052948 Exosc2 protein_coding protein_coding MGP_WSBEiJ_T0052949.1 MGP_WSBEiJ_G0024853.1 mouse_genomes_project 2 29863752 29874847 + Exosc2 protein_coding retained_intron MGP_WSBEiJ_T0052950.1 MGP_WSBEiJ_G0024853.1 mouse_genomes_project 2 29863767 29874386 + MGP_WSBEiJ_P0052950 Exosc2 protein_coding protein_coding MGP_WSBEiJ_T0052951.1 MGP_WSBEiJ_G0024853.1 mouse_genomes_project 2 29863776 29872337 + MGP_WSBEiJ_P0052951 Exosc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052952.1 MGP_WSBEiJ_G0024853.1 mouse_genomes_project 2 29867114 29872410 + Exosc2 protein_coding processed_transcript MGP_WSBEiJ_T0052953.1 MGP_WSBEiJ_G0024853.1 mouse_genomes_project 2 29872160 29874379 + Exosc2 protein_coding retained_intron MGP_WSBEiJ_T0007311.1 MGP_WSBEiJ_G0005999.1 mouse_genomes_project 2 175935219 175937667 + Gm14640 lincRNA lincRNA MGP_WSBEiJ_T0054628.1 MGP_WSBEiJ_G0025170.1 mouse_genomes_project 2 85150071 85151558 - MGP_WSBEiJ_P0054628 Gm19426 protein_coding protein_coding MGP_WSBEiJ_T0057134.1 MGP_WSBEiJ_G0025878.1 mouse_genomes_project 2 153461178 153496488 - MGP_WSBEiJ_P0057134 Zfp120 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057135.1 MGP_WSBEiJ_G0025878.1 mouse_genomes_project 2 153463914 153496452 - MGP_WSBEiJ_P0057135 Zfp120 protein_coding protein_coding MGP_WSBEiJ_T0057136.1 MGP_WSBEiJ_G0025878.1 mouse_genomes_project 2 153470359 153496462 - Zfp120 protein_coding processed_transcript MGP_WSBEiJ_T0017172.1 MGP_WSBEiJ_G0014833.1 mouse_genomes_project 2 30281496 30296778 - Gm16534 processed_transcript processed_transcript MGP_WSBEiJ_T0017173.1 MGP_WSBEiJ_G0014833.1 mouse_genomes_project 2 30282291 30297523 - Gm16534 processed_transcript processed_transcript MGP_WSBEiJ_T0053815.1 MGP_WSBEiJ_G0025017.1 mouse_genomes_project 2 58009982 58051493 + MGP_WSBEiJ_P0053815 Gm11099 protein_coding protein_coding MGP_WSBEiJ_T0013469.1 MGP_WSBEiJ_G0011599.1 mouse_genomes_project 2 160116161 160116643 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013421.1 MGP_WSBEiJ_G0011551.1 mouse_genomes_project 2 146652476 146653096 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052866.1 MGP_WSBEiJ_G0024841.1 mouse_genomes_project 2 29025609 29040880 - MGP_WSBEiJ_P0052866 Ptges protein_coding protein_coding MGP_WSBEiJ_T0052867.1 MGP_WSBEiJ_G0024841.1 mouse_genomes_project 2 29028420 29039377 - Ptges protein_coding processed_transcript MGP_WSBEiJ_T0052868.1 MGP_WSBEiJ_G0024841.1 mouse_genomes_project 2 29028434 29073843 - Ptges protein_coding processed_transcript MGP_WSBEiJ_T0052869.1 MGP_WSBEiJ_G0024841.1 mouse_genomes_project 2 29028626 29033655 - Ptges protein_coding processed_transcript MGP_WSBEiJ_T0054407.1 MGP_WSBEiJ_G0025132.1 mouse_genomes_project 2 76668870 76689331 + MGP_WSBEiJ_P0054407 Plekha3 protein_coding protein_coding MGP_WSBEiJ_T0054408.1 MGP_WSBEiJ_G0025132.1 mouse_genomes_project 2 76682350 76685266 + Plekha3 protein_coding processed_transcript MGP_WSBEiJ_T0004010.1 MGP_WSBEiJ_G0003557.1 mouse_genomes_project 2 134947585 134956334 + AV099323 antisense antisense MGP_WSBEiJ_T0057803.1 MGP_WSBEiJ_G0026031.1 mouse_genomes_project 2 161226808 161284397 + MGP_WSBEiJ_P0057803 Src protein_coding protein_coding MGP_WSBEiJ_T0057804.1 MGP_WSBEiJ_G0026031.1 mouse_genomes_project 2 161233240 161268418 + Src protein_coding processed_transcript MGP_WSBEiJ_T0057805.1 MGP_WSBEiJ_G0026031.1 mouse_genomes_project 2 161233404 161284424 + MGP_WSBEiJ_P0057805 Src protein_coding protein_coding MGP_WSBEiJ_T0057806.1 MGP_WSBEiJ_G0026031.1 mouse_genomes_project 2 161233417 161284400 + MGP_WSBEiJ_P0057806 Src protein_coding protein_coding MGP_WSBEiJ_T0057807.1 MGP_WSBEiJ_G0026031.1 mouse_genomes_project 2 161233516 161268317 + Src protein_coding processed_transcript MGP_WSBEiJ_T0057808.1 MGP_WSBEiJ_G0026031.1 mouse_genomes_project 2 161233516 161271156 + Src protein_coding processed_transcript MGP_WSBEiJ_T0057809.1 MGP_WSBEiJ_G0026031.1 mouse_genomes_project 2 161268381 161284400 + MGP_WSBEiJ_P0057809 Src protein_coding protein_coding MGP_WSBEiJ_T0057810.1 MGP_WSBEiJ_G0026031.1 mouse_genomes_project 2 161269649 161282923 + MGP_WSBEiJ_P0057810 Src protein_coding protein_coding MGP_WSBEiJ_T0010177.1 MGP_WSBEiJ_G0008334.1 mouse_genomes_project 2 7781520 7781606 + Mir669d-2 miRNA miRNA MGP_WSBEiJ_T0013181.1 MGP_WSBEiJ_G0011311.1 mouse_genomes_project 2 49293151 49293433 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052274.1 MGP_WSBEiJ_G0024746.1 mouse_genomes_project 2 24084999 24139444 - MGP_WSBEiJ_P0052274 Ccdc187 protein_coding unknown_likely_coding MGP_WSBEiJ_T0052276.1 MGP_WSBEiJ_G0024746.1 mouse_genomes_project 2 24114301 24139618 - MGP_WSBEiJ_P0052276 Ccdc187 protein_coding protein_coding MGP_WSBEiJ_T0052277.1 MGP_WSBEiJ_G0024746.1 mouse_genomes_project 2 24125299 24132011 - MGP_WSBEiJ_P0052277 Ccdc187 protein_coding protein_coding MGP_WSBEiJ_T0057622.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159794452 159836859 - MGP_WSBEiJ_P0057622 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057623.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159794455 159836812 - Cpne1 protein_coding retained_intron MGP_WSBEiJ_T0057624.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159794455 159836863 - MGP_WSBEiJ_P0057624 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057627.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159794457 159836867 - MGP_WSBEiJ_P0057627 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057628.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159795947 159796910 - Cpne1 protein_coding processed_transcript MGP_WSBEiJ_T0057629.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159795969 159836825 - MGP_WSBEiJ_P0057629 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057630.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159796003 159798865 - MGP_WSBEiJ_P0057630 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057631.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159796008 159798890 - Cpne1 protein_coding retained_intron MGP_WSBEiJ_T0057632.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159796122 159836828 - MGP_WSBEiJ_P0057632 Cpne1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057633.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159796127 159800772 - MGP_WSBEiJ_P0057633 Cpne1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057634.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159796712 159799164 - Cpne1 protein_coding retained_intron MGP_WSBEiJ_T0057635.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159796815 159836889 - MGP_WSBEiJ_P0057635 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057636.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159800010 159836833 - MGP_WSBEiJ_P0057636 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057637.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159800031 159801203 - Cpne1 protein_coding retained_intron MGP_WSBEiJ_T0057638.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159800778 159836883 - MGP_WSBEiJ_P0057638 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057639.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159801185 159836833 - MGP_WSBEiJ_P0057639 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0057640.1 MGP_WSBEiJ_G0026004.1 mouse_genomes_project 2 159801511 159836787 - MGP_WSBEiJ_P0057640 Cpne1 protein_coding protein_coding MGP_WSBEiJ_T0004110.1 MGP_WSBEiJ_G0003631.1 mouse_genomes_project 2 186152808 186167214 + Gm14341 antisense antisense MGP_WSBEiJ_T0003993.1 MGP_WSBEiJ_G0003545.1 mouse_genomes_project 2 129116128 129123802 + Gm27003 antisense antisense MGP_WSBEiJ_T0054721.1 MGP_WSBEiJ_G0025221.1 mouse_genomes_project 2 86738415 86739375 - MGP_WSBEiJ_P0054721 Olfr1047 protein_coding protein_coding MGP_WSBEiJ_T0099403.1 MGP_WSBEiJ_G0038066.1 mouse_genomes_project 2 164972810 164972935 + Gm25561 snoRNA snoRNA MGP_WSBEiJ_T0051617.1 MGP_WSBEiJ_G0024623.1 mouse_genomes_project 2 10976944 10977851 + MGP_WSBEiJ_P0051617 Vim protein_coding protein_coding MGP_WSBEiJ_T0051618.1 MGP_WSBEiJ_G0024623.1 mouse_genomes_project 2 10976969 10985711 + MGP_WSBEiJ_P0051618 Vim protein_coding protein_coding MGP_WSBEiJ_T0051619.1 MGP_WSBEiJ_G0024623.1 mouse_genomes_project 2 10977298 10985710 + MGP_WSBEiJ_P0051619 Vim protein_coding protein_coding MGP_WSBEiJ_T0051620.1 MGP_WSBEiJ_G0024623.1 mouse_genomes_project 2 10977339 10981619 + Vim protein_coding retained_intron MGP_WSBEiJ_T0051621.1 MGP_WSBEiJ_G0024623.1 mouse_genomes_project 2 10977540 10980464 + Vim protein_coding retained_intron MGP_WSBEiJ_T0051622.1 MGP_WSBEiJ_G0024623.1 mouse_genomes_project 2 10982240 10985363 + Vim protein_coding retained_intron MGP_WSBEiJ_T0056068.1 MGP_WSBEiJ_G0025628.1 mouse_genomes_project 2 123097386 123104082 + MGP_WSBEiJ_P0056068 Ccndbp1 protein_coding protein_coding MGP_WSBEiJ_T0056069.1 MGP_WSBEiJ_G0025628.1 mouse_genomes_project 2 123097421 123101898 + Ccndbp1 protein_coding processed_transcript MGP_WSBEiJ_T0056070.1 MGP_WSBEiJ_G0025628.1 mouse_genomes_project 2 123097426 123103754 + MGP_WSBEiJ_P0056070 Ccndbp1 protein_coding protein_coding MGP_WSBEiJ_T0056071.1 MGP_WSBEiJ_G0025628.1 mouse_genomes_project 2 123097464 123105843 + MGP_WSBEiJ_P0056071 Ccndbp1 protein_coding protein_coding MGP_WSBEiJ_T0056072.1 MGP_WSBEiJ_G0025628.1 mouse_genomes_project 2 123097658 123099529 + Ccndbp1 protein_coding retained_intron MGP_WSBEiJ_T0056073.1 MGP_WSBEiJ_G0025628.1 mouse_genomes_project 2 123100004 123100706 + Ccndbp1 protein_coding retained_intron MGP_WSBEiJ_T0056074.1 MGP_WSBEiJ_G0025628.1 mouse_genomes_project 2 123101440 123101910 + Ccndbp1 protein_coding processed_transcript MGP_WSBEiJ_T0056589.1 MGP_WSBEiJ_G0025749.1 mouse_genomes_project 2 132782622 132790522 - Snrpb protein_coding retained_intron MGP_WSBEiJ_T0056590.1 MGP_WSBEiJ_G0025749.1 mouse_genomes_project 2 132782843 132790622 - MGP_WSBEiJ_P0056590 Snrpb protein_coding protein_coding MGP_WSBEiJ_T0056591.1 MGP_WSBEiJ_G0025749.1 mouse_genomes_project 2 132782995 132790622 - MGP_WSBEiJ_P0056591 Snrpb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056592.1 MGP_WSBEiJ_G0025749.1 mouse_genomes_project 2 132788070 132790553 - Snrpb protein_coding retained_intron MGP_WSBEiJ_T0013229.1 MGP_WSBEiJ_G0011359.1 mouse_genomes_project 2 66420612 66421105 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003863.1 MGP_WSBEiJ_G0003449.1 mouse_genomes_project 2 27889002 27890589 - 2600006K01Rik antisense antisense MGP_WSBEiJ_T0056253.1 MGP_WSBEiJ_G0025666.1 mouse_genomes_project 2 124536346 124569297 + MGP_WSBEiJ_P0056253 Duox1 protein_coding protein_coding MGP_WSBEiJ_T0007268.1 MGP_WSBEiJ_G0005962.1 mouse_genomes_project 2 165193857 165194449 - Gm14242 lincRNA lincRNA MGP_WSBEiJ_T0054655.1 MGP_WSBEiJ_G0025179.1 mouse_genomes_project 2 85409905 85417263 + Prg3 protein_coding processed_transcript MGP_WSBEiJ_T0054656.1 MGP_WSBEiJ_G0025179.1 mouse_genomes_project 2 85409905 85417362 + MGP_WSBEiJ_P0054656 Prg3 protein_coding protein_coding MGP_WSBEiJ_T0017187.1 MGP_WSBEiJ_G0014842.1 mouse_genomes_project 2 56348250 56350532 - A930012O16Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017188.1 MGP_WSBEiJ_G0014842.1 mouse_genomes_project 2 56348250 56350532 - A930012O16Rik processed_transcript processed_transcript MGP_WSBEiJ_T0056354.1 MGP_WSBEiJ_G0025690.1 mouse_genomes_project 2 128412589 128585907 - MGP_WSBEiJ_P0056354 Fam227b protein_coding protein_coding MGP_WSBEiJ_T0056355.1 MGP_WSBEiJ_G0025690.1 mouse_genomes_project 2 128412734 128585887 - MGP_WSBEiJ_P0056355 Fam227b protein_coding protein_coding MGP_WSBEiJ_T0056356.1 MGP_WSBEiJ_G0025690.1 mouse_genomes_project 2 128412734 128573028 - MGP_WSBEiJ_P0056356 Fam227b protein_coding protein_coding MGP_WSBEiJ_T0056357.1 MGP_WSBEiJ_G0025690.1 mouse_genomes_project 2 128426604 128585907 - Fam227b protein_coding retained_intron MGP_WSBEiJ_T0007110.1 MGP_WSBEiJ_G0005834.1 mouse_genomes_project 2 66637073 66685186 - Gm13598 lincRNA lincRNA MGP_WSBEiJ_T0003869.1 MGP_WSBEiJ_G0003454.1 mouse_genomes_project 2 29825818 29832955 - Gm13425 antisense antisense MGP_WSBEiJ_T0007113.1 MGP_WSBEiJ_G0005837.1 mouse_genomes_project 2 71494433 71505847 + Platr26 lincRNA lincRNA MGP_WSBEiJ_T0099398.1 MGP_WSBEiJ_G0038061.1 mouse_genomes_project 2 162217188 162217319 - Gm24411 snoRNA snoRNA MGP_WSBEiJ_T0001028.1 MGP_WSBEiJ_G0000963.1 mouse_genomes_project 2 22608877 22613302 - TEC TEC MGP_WSBEiJ_T0097309.1 MGP_WSBEiJ_G0035984.1 mouse_genomes_project 2 1093557 1101181 + sense_intronic sense_intronic MGP_WSBEiJ_T0003951.1 MGP_WSBEiJ_G0003517.1 mouse_genomes_project 2 89777437 89788192 - Gm13763 antisense antisense MGP_WSBEiJ_T0010277.1 MGP_WSBEiJ_G0008434.1 mouse_genomes_project 2 105796593 105796673 - Mir1902 miRNA miRNA MGP_WSBEiJ_T0058549.1 MGP_WSBEiJ_G0026216.1 mouse_genomes_project 2 179374048 179385590 - MGP_WSBEiJ_P0058549 Ctsz protein_coding protein_coding MGP_WSBEiJ_T0013410.1 MGP_WSBEiJ_G0011540.1 mouse_genomes_project 2 141871441 141871755 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053163.1 MGP_WSBEiJ_G0024884.1 mouse_genomes_project 2 31002048 31041303 + MGP_WSBEiJ_P0053163 Sh2d3c protein_coding protein_coding MGP_WSBEiJ_T0053164.1 MGP_WSBEiJ_G0024884.1 mouse_genomes_project 2 31010929 31030348 + Sh2d3c protein_coding processed_transcript MGP_WSBEiJ_T0053165.1 MGP_WSBEiJ_G0024884.1 mouse_genomes_project 2 31010929 31041819 + MGP_WSBEiJ_P0053165 Sh2d3c protein_coding protein_coding MGP_WSBEiJ_T0053168.1 MGP_WSBEiJ_G0024884.1 mouse_genomes_project 2 31018844 31026826 + Sh2d3c protein_coding processed_transcript MGP_WSBEiJ_T0053169.1 MGP_WSBEiJ_G0024884.1 mouse_genomes_project 2 31026994 31032568 + Sh2d3c protein_coding processed_transcript MGP_WSBEiJ_T0053170.1 MGP_WSBEiJ_G0024884.1 mouse_genomes_project 2 31026996 31029180 + Sh2d3c protein_coding processed_transcript MGP_WSBEiJ_T0053171.1 MGP_WSBEiJ_G0024884.1 mouse_genomes_project 2 31027091 31041832 + MGP_WSBEiJ_P0053171 Sh2d3c protein_coding unknown_likely_coding MGP_WSBEiJ_T0013179.1 MGP_WSBEiJ_G0011309.1 mouse_genomes_project 2 48159476 48160251 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013507.1 MGP_WSBEiJ_G0011637.1 mouse_genomes_project 2 184108947 184109962 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007143.1 MGP_WSBEiJ_G0005861.1 mouse_genomes_project 2 78453998 78522260 + Gm14461 lincRNA lincRNA MGP_WSBEiJ_T0007144.1 MGP_WSBEiJ_G0005861.1 mouse_genomes_project 2 78521721 78522030 + Gm14461 lincRNA lincRNA MGP_WSBEiJ_T0013375.1 MGP_WSBEiJ_G0011505.1 mouse_genomes_project 2 123140683 123141450 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003990.1 MGP_WSBEiJ_G0003542.1 mouse_genomes_project 2 125023392 125029124 - Bloc1s6os antisense antisense MGP_WSBEiJ_T0013335.1 MGP_WSBEiJ_G0011465.1 mouse_genomes_project 2 105152371 105152613 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013422.1 MGP_WSBEiJ_G0011552.1 mouse_genomes_project 2 147010682 147011110 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057577.1 MGP_WSBEiJ_G0025997.1 mouse_genomes_project 2 159656546 159658568 + MGP_WSBEiJ_P0057577 Gm15557 protein_coding protein_coding MGP_WSBEiJ_T0056870.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138507451 138593931 + Plcb4 protein_coding processed_transcript MGP_WSBEiJ_T0056871.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138509171 138594018 + Plcb4 protein_coding processed_transcript MGP_WSBEiJ_T0056872.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138509203 138734305 + Plcb4 protein_coding retained_intron MGP_WSBEiJ_T0056873.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138509299 138846742 + MGP_WSBEiJ_P0056873 Plcb4 protein_coding protein_coding MGP_WSBEiJ_T0056874.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138593009 138767586 + Plcb4 protein_coding retained_intron MGP_WSBEiJ_T0056875.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138593009 138880981 + MGP_WSBEiJ_P0056875 Plcb4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056876.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138619705 138765506 + Plcb4 protein_coding processed_transcript MGP_WSBEiJ_T0056877.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138661214 138880780 + MGP_WSBEiJ_P0056877 Plcb4 protein_coding protein_coding MGP_WSBEiJ_T0056878.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138728530 138882328 + MGP_WSBEiJ_P0056878 Plcb4 protein_coding protein_coding MGP_WSBEiJ_T0056879.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138744174 138798059 + Plcb4 protein_coding processed_transcript MGP_WSBEiJ_T0056880.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138800827 138809115 + Plcb4 protein_coding processed_transcript MGP_WSBEiJ_T0056881.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138805230 138809068 + Plcb4 protein_coding processed_transcript MGP_WSBEiJ_T0056882.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138846757 138852882 + Plcb4 protein_coding processed_transcript MGP_WSBEiJ_T0056883.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138852561 138882319 + MGP_WSBEiJ_P0056883 Plcb4 protein_coding protein_coding MGP_WSBEiJ_T0056884.1 MGP_WSBEiJ_G0025809.1 mouse_genomes_project 2 138874953 138875767 + Plcb4 protein_coding processed_transcript MGP_WSBEiJ_T0017162.1 MGP_WSBEiJ_G0014826.1 mouse_genomes_project 2 25802004 25806131 - 2810430I11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0011294.1 MGP_WSBEiJ_G0009451.1 mouse_genomes_project 2 34547755 34547898 - Gm27953 misc_RNA misc_RNA MGP_WSBEiJ_T0051464.1 MGP_WSBEiJ_G0024602.1 mouse_genomes_project 2 7197229 7337187 - MGP_WSBEiJ_P0051464 Taf3 protein_coding protein_coding MGP_WSBEiJ_T0051465.1 MGP_WSBEiJ_G0024602.1 mouse_genomes_project 2 7197971 7224287 - Taf3 protein_coding processed_transcript MGP_WSBEiJ_T0051466.1 MGP_WSBEiJ_G0024602.1 mouse_genomes_project 2 7198756 7201515 - MGP_WSBEiJ_P0051466 Taf3 protein_coding protein_coding MGP_WSBEiJ_T0051467.1 MGP_WSBEiJ_G0024602.1 mouse_genomes_project 2 7198758 7201089 - MGP_WSBEiJ_P0051467 Taf3 protein_coding protein_coding MGP_WSBEiJ_T0011325.1 MGP_WSBEiJ_G0009482.1 mouse_genomes_project 2 179223922 179223986 + Gm27899 misc_RNA misc_RNA MGP_WSBEiJ_T0058199.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169500317 169501603 - Slc35c2 protein_coding retained_intron MGP_WSBEiJ_T0058200.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169500317 169511580 - MGP_WSBEiJ_P0058200 Slc35c2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058201.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169500317 169511511 - MGP_WSBEiJ_P0058201 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058202.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169500317 169511583 - MGP_WSBEiJ_P0058202 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058203.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169500317 169511511 - MGP_WSBEiJ_P0058203 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058204.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169500317 169511625 - MGP_WSBEiJ_P0058204 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058205.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169501215 169505979 - Slc35c2 protein_coding retained_intron MGP_WSBEiJ_T0058206.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169502115 169507124 - MGP_WSBEiJ_P0058206 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058207.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169502151 169507356 - MGP_WSBEiJ_P0058207 Slc35c2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058208.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169504382 169507356 - MGP_WSBEiJ_P0058208 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058209.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169504551 169511591 - MGP_WSBEiJ_P0058209 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058210.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169504551 169511592 - MGP_WSBEiJ_P0058210 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058211.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169504639 169510308 - MGP_WSBEiJ_P0058211 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058212.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169504644 169511583 - MGP_WSBEiJ_P0058212 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0058213.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169505314 169511594 - Slc35c2 protein_coding retained_intron MGP_WSBEiJ_T0058214.1 MGP_WSBEiJ_G0026138.1 mouse_genomes_project 2 169506634 169511528 - MGP_WSBEiJ_P0058214 Slc35c2 protein_coding protein_coding MGP_WSBEiJ_T0010234.1 MGP_WSBEiJ_G0008391.1 mouse_genomes_project 2 30412444 30412523 + Gm27805 miRNA miRNA MGP_WSBEiJ_T0100749.1 MGP_WSBEiJ_G0039207.1 mouse_genomes_project 2 178703661 178759741 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013437.1 MGP_WSBEiJ_G0011567.1 mouse_genomes_project 2 150552060 150553036 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013319.1 MGP_WSBEiJ_G0011449.1 mouse_genomes_project 2 99612899 99613224 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057047.1 MGP_WSBEiJ_G0025849.1 mouse_genomes_project 2 149122287 149139580 - MGP_WSBEiJ_P0057047 Crnkl1 protein_coding protein_coding MGP_WSBEiJ_T0057048.1 MGP_WSBEiJ_G0025849.1 mouse_genomes_project 2 149134959 149135958 - Crnkl1 protein_coding retained_intron MGP_WSBEiJ_T0057049.1 MGP_WSBEiJ_G0025849.1 mouse_genomes_project 2 149136538 149139280 - Crnkl1 protein_coding retained_intron MGP_WSBEiJ_T0052882.1 MGP_WSBEiJ_G0024844.1 mouse_genomes_project 2 29124855 29136797 - MGP_WSBEiJ_P0052882 BC005624 protein_coding protein_coding MGP_WSBEiJ_T0052883.1 MGP_WSBEiJ_G0024844.1 mouse_genomes_project 2 29129887 29135362 - BC005624 protein_coding retained_intron MGP_WSBEiJ_T0052884.1 MGP_WSBEiJ_G0024844.1 mouse_genomes_project 2 29135758 29137057 - BC005624 protein_coding retained_intron MGP_WSBEiJ_T0056651.1 MGP_WSBEiJ_G0025763.1 mouse_genomes_project 2 133206753 133208688 - MGP_WSBEiJ_P0056651 Avp protein_coding protein_coding MGP_WSBEiJ_T0003825.1 MGP_WSBEiJ_G0003421.1 mouse_genomes_project 2 11081012 11084516 + antisense antisense MGP_WSBEiJ_T0056862.1 MGP_WSBEiJ_G0025808.1 mouse_genomes_project 2 137599968 138328348 + MGP_WSBEiJ_P0056862 Plcb1 protein_coding protein_coding MGP_WSBEiJ_T0056863.1 MGP_WSBEiJ_G0025808.1 mouse_genomes_project 2 137600060 138328359 + MGP_WSBEiJ_P0056863 Plcb1 protein_coding protein_coding MGP_WSBEiJ_T0056864.1 MGP_WSBEiJ_G0025808.1 mouse_genomes_project 2 137600076 137822104 + Plcb1 protein_coding retained_intron MGP_WSBEiJ_T0056865.1 MGP_WSBEiJ_G0025808.1 mouse_genomes_project 2 137600130 138096652 + Plcb1 protein_coding retained_intron MGP_WSBEiJ_T0056866.1 MGP_WSBEiJ_G0025808.1 mouse_genomes_project 2 137600431 138248875 + MGP_WSBEiJ_P0056866 Plcb1 protein_coding protein_coding MGP_WSBEiJ_T0056867.1 MGP_WSBEiJ_G0025808.1 mouse_genomes_project 2 138063773 138104180 + Plcb1 protein_coding processed_transcript MGP_WSBEiJ_T0056868.1 MGP_WSBEiJ_G0025808.1 mouse_genomes_project 2 138063820 138104185 + MGP_WSBEiJ_P0056868 Plcb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056869.1 MGP_WSBEiJ_G0025808.1 mouse_genomes_project 2 138091289 138097540 + Plcb1 protein_coding processed_transcript MGP_WSBEiJ_T0057084.1 MGP_WSBEiJ_G0025856.1 mouse_genomes_project 2 150344380 150346507 - MGP_WSBEiJ_P0057084 Nkx2-4 protein_coding protein_coding MGP_WSBEiJ_T0013191.1 MGP_WSBEiJ_G0011321.1 mouse_genomes_project 2 51533014 51533297 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058756.1 MGP_WSBEiJ_G0026265.1 mouse_genomes_project 2 186514950 186522988 - MGP_WSBEiJ_P0058756 Stmn3 protein_coding protein_coding MGP_WSBEiJ_T0100716.1 MGP_WSBEiJ_G0039174.1 mouse_genomes_project 2 87118618 87119563 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004108.1 MGP_WSBEiJ_G0003629.1 mouse_genomes_project 2 185220782 185222372 + Gm17180 antisense antisense MGP_WSBEiJ_T0003903.1 MGP_WSBEiJ_G0003481.1 mouse_genomes_project 2 59594658 59595713 + Gm13580 antisense antisense MGP_WSBEiJ_T0055872.1 MGP_WSBEiJ_G0025598.1 mouse_genomes_project 2 121651708 121686692 + MGP_WSBEiJ_P0055872 Nusap1 protein_coding protein_coding MGP_WSBEiJ_T0055873.1 MGP_WSBEiJ_G0025598.1 mouse_genomes_project 2 121652104 121669071 + Nusap1 protein_coding processed_transcript MGP_WSBEiJ_T0055874.1 MGP_WSBEiJ_G0025598.1 mouse_genomes_project 2 121652127 121689663 + MGP_WSBEiJ_P0055874 Nusap1 protein_coding protein_coding MGP_WSBEiJ_T0055875.1 MGP_WSBEiJ_G0025598.1 mouse_genomes_project 2 121652139 121663758 + Nusap1 protein_coding processed_transcript MGP_WSBEiJ_T0013262.1 MGP_WSBEiJ_G0011392.1 mouse_genomes_project 2 79269292 79269494 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017325.1 MGP_WSBEiJ_G0014913.1 mouse_genomes_project 2 171953443 172016839 + Gm11476 processed_transcript processed_transcript MGP_WSBEiJ_T0053555.1 MGP_WSBEiJ_G0024972.1 mouse_genomes_project 2 37503535 37507578 - MGP_WSBEiJ_P0053555 Rpl35 protein_coding protein_coding MGP_WSBEiJ_T0053556.1 MGP_WSBEiJ_G0024972.1 mouse_genomes_project 2 37503574 37506997 - Rpl35 protein_coding processed_transcript MGP_WSBEiJ_T0053557.1 MGP_WSBEiJ_G0024972.1 mouse_genomes_project 2 37506565 37507076 - Rpl35 protein_coding processed_transcript MGP_WSBEiJ_T0007096.1 MGP_WSBEiJ_G0005822.1 mouse_genomes_project 2 50335400 50354695 - 1700057H21Rik lincRNA lincRNA MGP_WSBEiJ_T0007097.1 MGP_WSBEiJ_G0005822.1 mouse_genomes_project 2 50335466 50353799 - 1700057H21Rik lincRNA lincRNA MGP_WSBEiJ_T0056436.1 MGP_WSBEiJ_G0025707.1 mouse_genomes_project 2 129723916 129731091 - MGP_WSBEiJ_P0056436 Ciao1 protein_coding protein_coding MGP_WSBEiJ_T0056437.1 MGP_WSBEiJ_G0025707.1 mouse_genomes_project 2 129726330 129729517 - Ciao1 protein_coding retained_intron MGP_WSBEiJ_T0056438.1 MGP_WSBEiJ_G0025707.1 mouse_genomes_project 2 129726457 129731091 - MGP_WSBEiJ_P0056438 Ciao1 protein_coding protein_coding MGP_WSBEiJ_T0056439.1 MGP_WSBEiJ_G0025707.1 mouse_genomes_project 2 129729326 129731091 - MGP_WSBEiJ_P0056439 Ciao1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057278.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156288044 156342148 - MGP_WSBEiJ_P0057278 Bcl2l1 protein_coding protein_coding MGP_WSBEiJ_T0057279.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156288048 156341086 - MGP_WSBEiJ_P0057279 Bcl2l1 protein_coding protein_coding MGP_WSBEiJ_T0057280.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156288787 156338955 - Bcl2l1 protein_coding processed_transcript MGP_WSBEiJ_T0057281.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156338546 156341061 - MGP_WSBEiJ_P0057281 Bcl2l1 protein_coding protein_coding MGP_WSBEiJ_T0057282.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156338781 156340730 - MGP_WSBEiJ_P0057282 Bcl2l1 protein_coding protein_coding MGP_WSBEiJ_T0057283.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156339846 156341532 - MGP_WSBEiJ_P0057283 Bcl2l1 protein_coding protein_coding MGP_WSBEiJ_T0057284.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156339948 156341072 - MGP_WSBEiJ_P0057284 Bcl2l1 protein_coding protein_coding MGP_WSBEiJ_T0057285.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156340120 156341038 - MGP_WSBEiJ_P0057285 Bcl2l1 protein_coding protein_coding MGP_WSBEiJ_T0057286.1 MGP_WSBEiJ_G0025927.1 mouse_genomes_project 2 156340176 156342130 - MGP_WSBEiJ_P0057286 Bcl2l1 protein_coding protein_coding MGP_WSBEiJ_T0001006.1 MGP_WSBEiJ_G0000941.1 mouse_genomes_project 2 10387850 10391097 + TEC TEC MGP_WSBEiJ_T0056890.1 MGP_WSBEiJ_G0025811.1 mouse_genomes_project 2 138947264 139266471 - MGP_WSBEiJ_P0056890 Pak7 protein_coding protein_coding MGP_WSBEiJ_T0056891.1 MGP_WSBEiJ_G0025811.1 mouse_genomes_project 2 138948057 139266493 - MGP_WSBEiJ_P0056891 Pak7 protein_coding protein_coding MGP_WSBEiJ_T0056892.1 MGP_WSBEiJ_G0025811.1 mouse_genomes_project 2 139141318 139266500 - Pak7 protein_coding retained_intron MGP_WSBEiJ_T0007140.1 MGP_WSBEiJ_G0005859.1 mouse_genomes_project 2 77880281 77882602 + Gm13661 lincRNA lincRNA MGP_WSBEiJ_T0058808.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712400 186730489 + MGP_WSBEiJ_P0058808 Tpd52l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058809.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712422 186723664 + Tpd52l2 protein_coding processed_transcript MGP_WSBEiJ_T0058810.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712423 186733340 + MGP_WSBEiJ_P0058810 Tpd52l2 protein_coding protein_coding MGP_WSBEiJ_T0058811.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712439 186732745 + MGP_WSBEiJ_P0058811 Tpd52l2 protein_coding protein_coding MGP_WSBEiJ_T0058812.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712441 186730500 + MGP_WSBEiJ_P0058812 Tpd52l2 protein_coding protein_coding MGP_WSBEiJ_T0058813.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712445 186733336 + MGP_WSBEiJ_P0058813 Tpd52l2 protein_coding protein_coding MGP_WSBEiJ_T0058814.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712457 186731630 + MGP_WSBEiJ_P0058814 Tpd52l2 protein_coding protein_coding MGP_WSBEiJ_T0058815.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712487 186717811 + Tpd52l2 protein_coding retained_intron MGP_WSBEiJ_T0058816.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186712489 186730761 + MGP_WSBEiJ_P0058816 Tpd52l2 protein_coding protein_coding MGP_WSBEiJ_T0058817.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186715103 186728430 + MGP_WSBEiJ_P0058817 Tpd52l2 protein_coding protein_coding MGP_WSBEiJ_T0058818.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186715124 186718407 + Tpd52l2 protein_coding retained_intron MGP_WSBEiJ_T0058819.1 MGP_WSBEiJ_G0026273.1 mouse_genomes_project 2 186727951 186730707 + Tpd52l2 protein_coding retained_intron MGP_WSBEiJ_T0099364.1 MGP_WSBEiJ_G0038027.1 mouse_genomes_project 2 81170245 81170376 + Gm22652 snoRNA snoRNA MGP_WSBEiJ_T0099368.1 MGP_WSBEiJ_G0038031.1 mouse_genomes_project 2 95720306 95720438 - Gm26396 snoRNA snoRNA MGP_WSBEiJ_T0017210.1 MGP_WSBEiJ_G0014861.1 mouse_genomes_project 2 89957224 89965786 - processed_transcript processed_transcript MGP_WSBEiJ_T0055699.1 MGP_WSBEiJ_G0025556.1 mouse_genomes_project 2 117420573 117621151 + MGP_WSBEiJ_P0055699 BC052040 protein_coding protein_coding MGP_WSBEiJ_T0055700.1 MGP_WSBEiJ_G0025556.1 mouse_genomes_project 2 117420590 117621151 + MGP_WSBEiJ_P0055700 BC052040 protein_coding protein_coding MGP_WSBEiJ_T0055701.1 MGP_WSBEiJ_G0025556.1 mouse_genomes_project 2 117420658 117480253 + BC052040 protein_coding processed_transcript MGP_WSBEiJ_T0058550.1 MGP_WSBEiJ_G0026217.1 mouse_genomes_project 2 179398647 179405737 + MGP_WSBEiJ_P0058550 Tubb1 protein_coding protein_coding MGP_WSBEiJ_T0013406.1 MGP_WSBEiJ_G0011536.1 mouse_genomes_project 2 137547711 137548024 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099409.1 MGP_WSBEiJ_G0038072.1 mouse_genomes_project 2 171410751 171410841 + Snord12 snoRNA snoRNA MGP_WSBEiJ_T0007134.1 MGP_WSBEiJ_G0005853.1 mouse_genomes_project 2 75054177 75069748 - Gm13652 lincRNA lincRNA MGP_WSBEiJ_T0055835.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121214690 121216612 + Zfyve19 protein_coding processed_transcript MGP_WSBEiJ_T0055836.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121215085 121216675 + Zfyve19 protein_coding processed_transcript MGP_WSBEiJ_T0055837.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121215105 121217838 + Zfyve19 protein_coding processed_transcript MGP_WSBEiJ_T0055838.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121215114 121217216 + Zfyve19 protein_coding retained_intron MGP_WSBEiJ_T0055839.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121215203 121225053 + MGP_WSBEiJ_P0055839 Zfyve19 protein_coding protein_coding MGP_WSBEiJ_T0055840.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121216910 121222888 + Zfyve19 protein_coding retained_intron MGP_WSBEiJ_T0055841.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121217534 121217792 + Zfyve19 protein_coding processed_transcript MGP_WSBEiJ_T0055842.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121217713 121222910 + Zfyve19 protein_coding retained_intron MGP_WSBEiJ_T0055843.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121222454 121224396 + Zfyve19 protein_coding retained_intron MGP_WSBEiJ_T0055844.1 MGP_WSBEiJ_G0025587.1 mouse_genomes_project 2 121224263 121225048 + Zfyve19 protein_coding retained_intron MGP_WSBEiJ_T0004026.1 MGP_WSBEiJ_G0003566.1 mouse_genomes_project 2 146024793 146025401 + Kif16bos antisense antisense MGP_WSBEiJ_T0053166.1 MGP_WSBEiJ_G0024885.1 mouse_genomes_project 2 31016189 31018442 - 6330409D20Rik protein_coding processed_transcript MGP_WSBEiJ_T0053167.1 MGP_WSBEiJ_G0024885.1 mouse_genomes_project 2 31016189 31026521 - MGP_WSBEiJ_P0053167 6330409D20Rik protein_coding protein_coding MGP_WSBEiJ_T0007301.1 MGP_WSBEiJ_G0005990.1 mouse_genomes_project 2 173796983 173799761 + 9430093N23Rik lincRNA lincRNA MGP_WSBEiJ_T0013255.1 MGP_WSBEiJ_G0011385.1 mouse_genomes_project 2 77256414 77256847 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099337.1 MGP_WSBEiJ_G0038000.1 mouse_genomes_project 2 24779036 24779110 + Gm22879 snoRNA snoRNA MGP_WSBEiJ_T0007148.1 MGP_WSBEiJ_G0005865.1 mouse_genomes_project 2 84905805 84931699 - Gm13710 lincRNA lincRNA MGP_WSBEiJ_T0056030.1 MGP_WSBEiJ_G0025622.1 mouse_genomes_project 2 122691455 122706355 + MGP_WSBEiJ_P0056030 Haus2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056031.1 MGP_WSBEiJ_G0025622.1 mouse_genomes_project 2 122691498 122707486 + MGP_WSBEiJ_P0056031 Haus2 protein_coding protein_coding MGP_WSBEiJ_T0054863.1 MGP_WSBEiJ_G0025345.1 mouse_genomes_project 2 90122951 90123893 - MGP_WSBEiJ_P0054863 Olfr1231 protein_coding protein_coding MGP_WSBEiJ_T0052641.1 MGP_WSBEiJ_G0024812.1 mouse_genomes_project 2 27889435 27891627 + MGP_WSBEiJ_P0052641 Cercam protein_coding protein_coding MGP_WSBEiJ_T0052642.1 MGP_WSBEiJ_G0024812.1 mouse_genomes_project 2 27889765 27905481 + MGP_WSBEiJ_P0052642 Cercam protein_coding protein_coding MGP_WSBEiJ_T0052643.1 MGP_WSBEiJ_G0024812.1 mouse_genomes_project 2 27889815 27891581 + MGP_WSBEiJ_P0052643 Cercam protein_coding protein_coding MGP_WSBEiJ_T0052644.1 MGP_WSBEiJ_G0024812.1 mouse_genomes_project 2 27896427 27898928 + Cercam protein_coding retained_intron MGP_WSBEiJ_T0052645.1 MGP_WSBEiJ_G0024812.1 mouse_genomes_project 2 27896974 27902541 + Cercam protein_coding retained_intron MGP_WSBEiJ_T0007191.1 MGP_WSBEiJ_G0005901.1 mouse_genomes_project 2 117328865 117348287 - 3110099E03Rik lincRNA lincRNA MGP_WSBEiJ_T0007192.1 MGP_WSBEiJ_G0005901.1 mouse_genomes_project 2 117330383 117364469 - 3110099E03Rik lincRNA lincRNA MGP_WSBEiJ_T0007193.1 MGP_WSBEiJ_G0005901.1 mouse_genomes_project 2 117331091 117348293 - 3110099E03Rik lincRNA lincRNA MGP_WSBEiJ_T0052228.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23650866 23705810 + MGP_WSBEiJ_P0052228 Kcnt1 protein_coding protein_coding MGP_WSBEiJ_T0052229.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23650927 23676038 + Kcnt1 protein_coding retained_intron MGP_WSBEiJ_T0052230.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23650986 23704882 + MGP_WSBEiJ_P0052230 Kcnt1 protein_coding protein_coding MGP_WSBEiJ_T0052231.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23651100 23704882 + MGP_WSBEiJ_P0052231 Kcnt1 protein_coding protein_coding MGP_WSBEiJ_T0052232.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23664876 23706325 + MGP_WSBEiJ_P0052232 Kcnt1 protein_coding protein_coding MGP_WSBEiJ_T0052233.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23664950 23682229 + Kcnt1 protein_coding retained_intron MGP_WSBEiJ_T0052234.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23664956 23705376 + MGP_WSBEiJ_P0052234 Kcnt1 protein_coding protein_coding MGP_WSBEiJ_T0052235.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23664963 23705845 + Kcnt1 protein_coding retained_intron MGP_WSBEiJ_T0052236.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23664966 23707037 + MGP_WSBEiJ_P0052236 Kcnt1 protein_coding protein_coding MGP_WSBEiJ_T0052237.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23664974 23704882 + MGP_WSBEiJ_P0052237 Kcnt1 protein_coding protein_coding MGP_WSBEiJ_T0052238.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23681397 23705357 + Kcnt1 protein_coding retained_intron MGP_WSBEiJ_T0052239.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23687942 23690447 + MGP_WSBEiJ_P0052239 Kcnt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052240.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23690553 23698673 + MGP_WSBEiJ_P0052240 Kcnt1 protein_coding protein_coding MGP_WSBEiJ_T0052241.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23695113 23705688 + Kcnt1 protein_coding retained_intron MGP_WSBEiJ_T0052242.1 MGP_WSBEiJ_G0024740.1 mouse_genomes_project 2 23699657 23705005 + Kcnt1 protein_coding retained_intron MGP_WSBEiJ_T0007235.1 MGP_WSBEiJ_G0005935.1 mouse_genomes_project 2 141504943 141567468 + Gm14061 lincRNA lincRNA MGP_WSBEiJ_T0004041.1 MGP_WSBEiJ_G0003578.1 mouse_genomes_project 2 155121765 155128750 - Tmem74bos antisense antisense MGP_WSBEiJ_T0004042.1 MGP_WSBEiJ_G0003578.1 mouse_genomes_project 2 155123324 155128474 - Tmem74bos antisense antisense MGP_WSBEiJ_T0098093.1 MGP_WSBEiJ_G0036756.1 mouse_genomes_project 2 26546102 26546206 + Gm22675 snRNA snRNA MGP_WSBEiJ_T0097319.1 MGP_WSBEiJ_G0035994.1 mouse_genomes_project 2 132093611 132109571 - Gm14040 sense_intronic sense_intronic MGP_WSBEiJ_T0053484.1 MGP_WSBEiJ_G0024958.1 mouse_genomes_project 2 35859887 35865307 - MGP_WSBEiJ_P0053484 Zbtb6 protein_coding protein_coding MGP_WSBEiJ_T0053485.1 MGP_WSBEiJ_G0024958.1 mouse_genomes_project 2 35859890 35878483 - MGP_WSBEiJ_P0053485 Zbtb6 protein_coding protein_coding MGP_WSBEiJ_T0052456.1 MGP_WSBEiJ_G0024777.1 mouse_genomes_project 2 25034469 25053680 + MGP_WSBEiJ_P0052456 Dbh protein_coding protein_coding MGP_WSBEiJ_T0052457.1 MGP_WSBEiJ_G0024777.1 mouse_genomes_project 2 25047572 25047852 + Dbh protein_coding processed_transcript MGP_WSBEiJ_T0013416.1 MGP_WSBEiJ_G0011546.1 mouse_genomes_project 2 144938419 144938964 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058471.1 MGP_WSBEiJ_G0026195.1 mouse_genomes_project 2 177255154 177263484 - MGP_WSBEiJ_P0058471 Gcnt7 protein_coding protein_coding MGP_WSBEiJ_T0058472.1 MGP_WSBEiJ_G0026195.1 mouse_genomes_project 2 177255155 177259602 - MGP_WSBEiJ_P0058472 Gcnt7 protein_coding protein_coding MGP_WSBEiJ_T0011315.1 MGP_WSBEiJ_G0009472.1 mouse_genomes_project 2 145493769 145494073 + Gm23179 misc_RNA misc_RNA MGP_WSBEiJ_T0057446.1 MGP_WSBEiJ_G0025973.1 mouse_genomes_project 2 158447694 158448470 - Gm14214 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0057447.1 MGP_WSBEiJ_G0025973.1 mouse_genomes_project 2 158447694 158448372 - MGP_WSBEiJ_P0057447 Gm14214 protein_coding protein_coding MGP_WSBEiJ_T0058372.1 MGP_WSBEiJ_G0026168.1 mouse_genomes_project 2 172367547 172411401 + Ptpn1 protein_coding processed_transcript MGP_WSBEiJ_T0058373.1 MGP_WSBEiJ_G0026168.1 mouse_genomes_project 2 172367817 172416050 + MGP_WSBEiJ_P0058373 Ptpn1 protein_coding protein_coding MGP_WSBEiJ_T0058374.1 MGP_WSBEiJ_G0026168.1 mouse_genomes_project 2 172367862 172404441 + Ptpn1 protein_coding processed_transcript MGP_WSBEiJ_T0058375.1 MGP_WSBEiJ_G0026168.1 mouse_genomes_project 2 172367862 172416050 + Ptpn1 protein_coding processed_transcript MGP_WSBEiJ_T0058376.1 MGP_WSBEiJ_G0026168.1 mouse_genomes_project 2 172367885 172400344 + Ptpn1 protein_coding processed_transcript MGP_WSBEiJ_T0058377.1 MGP_WSBEiJ_G0026168.1 mouse_genomes_project 2 172367885 172404389 + Ptpn1 protein_coding processed_transcript MGP_WSBEiJ_T0058378.1 MGP_WSBEiJ_G0026168.1 mouse_genomes_project 2 172386309 172401724 + Ptpn1 protein_coding processed_transcript MGP_WSBEiJ_T0054844.1 MGP_WSBEiJ_G0025330.1 mouse_genomes_project 2 89817380 89825604 - MGP_WSBEiJ_P0054844 protein_coding protein_coding MGP_WSBEiJ_T0054845.1 MGP_WSBEiJ_G0025330.1 mouse_genomes_project 2 89817879 89825579 - protein_coding processed_transcript MGP_WSBEiJ_T0054846.1 MGP_WSBEiJ_G0025330.1 mouse_genomes_project 2 89818096 89825598 - protein_coding processed_transcript MGP_WSBEiJ_T0013403.1 MGP_WSBEiJ_G0011533.1 mouse_genomes_project 2 135394154 135394956 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056536.1 MGP_WSBEiJ_G0025734.1 mouse_genomes_project 2 131530958 131585422 + MGP_WSBEiJ_P0056536 Zc3h6 protein_coding protein_coding MGP_WSBEiJ_T0056537.1 MGP_WSBEiJ_G0025734.1 mouse_genomes_project 2 131530965 131561055 + MGP_WSBEiJ_P0056537 Zc3h6 protein_coding protein_coding MGP_WSBEiJ_T0004020.1 MGP_WSBEiJ_G0003562.1 mouse_genomes_project 2 138167043 138431345 - 9630028H03Rik antisense antisense MGP_WSBEiJ_T0004021.1 MGP_WSBEiJ_G0003562.1 mouse_genomes_project 2 138428295 138431057 - 9630028H03Rik antisense antisense MGP_WSBEiJ_T0055334.1 MGP_WSBEiJ_G0025446.1 mouse_genomes_project 2 103114652 103126275 + Commd9 protein_coding processed_transcript MGP_WSBEiJ_T0055335.1 MGP_WSBEiJ_G0025446.1 mouse_genomes_project 2 103114658 103130961 + MGP_WSBEiJ_P0055335 Commd9 protein_coding protein_coding MGP_WSBEiJ_T0055336.1 MGP_WSBEiJ_G0025446.1 mouse_genomes_project 2 103114665 103126541 + Commd9 protein_coding retained_intron MGP_WSBEiJ_T0055337.1 MGP_WSBEiJ_G0025446.1 mouse_genomes_project 2 103114668 103124734 + Commd9 protein_coding retained_intron MGP_WSBEiJ_T0007076.1 MGP_WSBEiJ_G0005805.1 mouse_genomes_project 2 33626507 33629238 + Gm13605 lincRNA lincRNA MGP_WSBEiJ_T0013430.1 MGP_WSBEiJ_G0011560.1 mouse_genomes_project 2 148901542 148901854 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013474.1 MGP_WSBEiJ_G0011604.1 mouse_genomes_project 2 160645982 160646526 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099379.1 MGP_WSBEiJ_G0038042.1 mouse_genomes_project 2 130177588 130177646 + Gm22889 snoRNA snoRNA MGP_WSBEiJ_T0054865.1 MGP_WSBEiJ_G0025347.1 mouse_genomes_project 2 90166496 90167414 - MGP_WSBEiJ_P0054865 Olfr1233 protein_coding protein_coding MGP_WSBEiJ_T0007203.1 MGP_WSBEiJ_G0005908.1 mouse_genomes_project 2 119761791 119859013 + 4930412B13Rik lincRNA lincRNA MGP_WSBEiJ_T0100710.1 MGP_WSBEiJ_G0039168.1 mouse_genomes_project 2 86970907 86983219 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0058067.1 MGP_WSBEiJ_G0026100.1 mouse_genomes_project 2 168588018 168591872 + Sys1 protein_coding processed_transcript MGP_WSBEiJ_T0058068.1 MGP_WSBEiJ_G0026100.1 mouse_genomes_project 2 168588030 168598487 + MGP_WSBEiJ_P0058068 Sys1 protein_coding protein_coding MGP_WSBEiJ_T0058069.1 MGP_WSBEiJ_G0026100.1 mouse_genomes_project 2 168588142 168592244 + Sys1 protein_coding processed_transcript MGP_WSBEiJ_T0058071.1 MGP_WSBEiJ_G0026100.1 mouse_genomes_project 2 168591906 168598483 + MGP_WSBEiJ_P0058071 Sys1 protein_coding protein_coding MGP_WSBEiJ_T0058072.1 MGP_WSBEiJ_G0026100.1 mouse_genomes_project 2 168591935 168607419 + MGP_WSBEiJ_P0058072 Sys1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058073.1 MGP_WSBEiJ_G0026100.1 mouse_genomes_project 2 168591988 168613189 + MGP_WSBEiJ_P0058073 Sys1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058074.1 MGP_WSBEiJ_G0026100.1 mouse_genomes_project 2 168592244 168607419 + MGP_WSBEiJ_P0058074 Sys1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0007034.1 MGP_WSBEiJ_G0005774.1 mouse_genomes_project 2 8639964 8644401 - Gm38171 lincRNA lincRNA MGP_WSBEiJ_T0055200.1 MGP_WSBEiJ_G0025419.1 mouse_genomes_project 2 93207047 93208113 + 1700029I15Rik protein_coding retained_intron MGP_WSBEiJ_T0055201.1 MGP_WSBEiJ_G0025419.1 mouse_genomes_project 2 93207427 93208113 + MGP_WSBEiJ_P0055201 1700029I15Rik protein_coding protein_coding MGP_WSBEiJ_T0055202.1 MGP_WSBEiJ_G0025419.1 mouse_genomes_project 2 93207427 93210202 + MGP_WSBEiJ_P0055202 1700029I15Rik protein_coding protein_coding MGP_WSBEiJ_T0055203.1 MGP_WSBEiJ_G0025419.1 mouse_genomes_project 2 93207427 93208099 + MGP_WSBEiJ_P0055203 1700029I15Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013501.1 MGP_WSBEiJ_G0011631.1 mouse_genomes_project 2 172887696 172888541 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052127.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23219057 23224872 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052128.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23219057 23224120 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052135.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223369 23224237 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052136.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223401 23225014 - MGP_WSBEiJ_P0052136 BC029214 protein_coding protein_coding MGP_WSBEiJ_T0052137.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223403 23224992 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052138.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223404 23224199 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052139.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223404 23224584 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052140.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223450 23224928 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052141.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223480 23224885 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052142.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223734 23224951 - MGP_WSBEiJ_P0052142 BC029214 protein_coding protein_coding MGP_WSBEiJ_T0052143.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223931 23224943 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052144.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23223947 23224847 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0052145.1 MGP_WSBEiJ_G0024713.1 mouse_genomes_project 2 23224178 23224868 - BC029214 protein_coding processed_transcript MGP_WSBEiJ_T0001016.1 MGP_WSBEiJ_G0000951.1 mouse_genomes_project 2 12085112 12087751 + TEC TEC MGP_WSBEiJ_T0052151.1 MGP_WSBEiJ_G0024716.1 mouse_genomes_project 2 23254837 23257899 - MGP_WSBEiJ_P0052151 Lcn12 protein_coding protein_coding MGP_WSBEiJ_T0052152.1 MGP_WSBEiJ_G0024716.1 mouse_genomes_project 2 23254839 23257420 - MGP_WSBEiJ_P0052152 Lcn12 protein_coding protein_coding MGP_WSBEiJ_T0007226.1 MGP_WSBEiJ_G0005926.1 mouse_genomes_project 2 136181947 136205955 + A430048G15Rik lincRNA lincRNA MGP_WSBEiJ_T0007147.1 MGP_WSBEiJ_G0005864.1 mouse_genomes_project 2 83485255 83521655 - Gm28675 lincRNA lincRNA MGP_WSBEiJ_T0058489.1 MGP_WSBEiJ_G0026201.1 mouse_genomes_project 2 177877539 177889554 + MGP_WSBEiJ_P0058489 Rbm38 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058490.1 MGP_WSBEiJ_G0026201.1 mouse_genomes_project 2 177877553 177890369 + Rbm38 protein_coding retained_intron MGP_WSBEiJ_T0058491.1 MGP_WSBEiJ_G0026201.1 mouse_genomes_project 2 177877680 177890375 + MGP_WSBEiJ_P0058491 Rbm38 protein_coding protein_coding MGP_WSBEiJ_T0058492.1 MGP_WSBEiJ_G0026201.1 mouse_genomes_project 2 177877751 177889291 + MGP_WSBEiJ_P0058492 Rbm38 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058493.1 MGP_WSBEiJ_G0026201.1 mouse_genomes_project 2 177878078 177889350 + MGP_WSBEiJ_P0058493 Rbm38 protein_coding protein_coding MGP_WSBEiJ_T0058494.1 MGP_WSBEiJ_G0026201.1 mouse_genomes_project 2 177878689 177890341 + Rbm38 protein_coding retained_intron MGP_WSBEiJ_T0013407.1 MGP_WSBEiJ_G0011537.1 mouse_genomes_project 2 139277576 139278218 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017204.1 MGP_WSBEiJ_G0014856.1 mouse_genomes_project 2 87461356 87466449 - processed_transcript processed_transcript MGP_WSBEiJ_T0058663.1 MGP_WSBEiJ_G0026247.1 mouse_genomes_project 2 185823324 185870604 - MGP_WSBEiJ_P0058663 Dido1 protein_coding protein_coding MGP_WSBEiJ_T0058664.1 MGP_WSBEiJ_G0026247.1 mouse_genomes_project 2 185835261 185878253 - MGP_WSBEiJ_P0058664 Dido1 protein_coding protein_coding MGP_WSBEiJ_T0058665.1 MGP_WSBEiJ_G0026247.1 mouse_genomes_project 2 185835263 185842728 - MGP_WSBEiJ_P0058665 Dido1 protein_coding protein_coding MGP_WSBEiJ_T0058666.1 MGP_WSBEiJ_G0026247.1 mouse_genomes_project 2 185836186 185870604 - MGP_WSBEiJ_P0058666 Dido1 protein_coding protein_coding MGP_WSBEiJ_T0058667.1 MGP_WSBEiJ_G0026247.1 mouse_genomes_project 2 185847827 185878253 - MGP_WSBEiJ_P0058667 Dido1 protein_coding protein_coding MGP_WSBEiJ_T0058668.1 MGP_WSBEiJ_G0026247.1 mouse_genomes_project 2 185847842 185870604 - MGP_WSBEiJ_P0058668 Dido1 protein_coding protein_coding MGP_WSBEiJ_T0058669.1 MGP_WSBEiJ_G0026247.1 mouse_genomes_project 2 185851793 185870246 - Dido1 protein_coding processed_transcript MGP_WSBEiJ_T0100750.1 MGP_WSBEiJ_G0039208.1 mouse_genomes_project 2 180045196 180048121 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098092.1 MGP_WSBEiJ_G0036755.1 mouse_genomes_project 2 25430578 25430704 - Gm25541 snRNA snRNA MGP_WSBEiJ_T0055060.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91992704 91998310 + MGP_WSBEiJ_P0055060 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055061.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91992865 91993879 + Pacsin3 protein_coding retained_intron MGP_WSBEiJ_T0055062.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91992894 91997282 + MGP_WSBEiJ_P0055062 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055063.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91992912 92001390 + MGP_WSBEiJ_P0055063 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055064.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91993563 92001389 + MGP_WSBEiJ_P0055064 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055065.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91993563 92001390 + MGP_WSBEiJ_P0055065 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055066.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91993563 91997987 + MGP_WSBEiJ_P0055066 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055067.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91993588 91998076 + MGP_WSBEiJ_P0055067 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055068.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91994079 92001390 + MGP_WSBEiJ_P0055068 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055069.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91994085 91998042 + MGP_WSBEiJ_P0055069 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055070.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91995946 91996970 + Pacsin3 protein_coding processed_transcript MGP_WSBEiJ_T0055071.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91996569 91998339 + MGP_WSBEiJ_P0055071 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0055072.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91997545 91998410 + Pacsin3 protein_coding retained_intron MGP_WSBEiJ_T0055073.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91999623 92000244 + Pacsin3 protein_coding retained_intron MGP_WSBEiJ_T0055074.1 MGP_WSBEiJ_G0025400.1 mouse_genomes_project 2 91999816 92001070 + MGP_WSBEiJ_P0055074 Pacsin3 protein_coding protein_coding MGP_WSBEiJ_T0052795.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457761 28466039 + MGP_WSBEiJ_P0052795 Dolpp1 protein_coding protein_coding MGP_WSBEiJ_T0052796.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457923 28466037 + MGP_WSBEiJ_P0052796 Dolpp1 protein_coding protein_coding MGP_WSBEiJ_T0052797.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457923 28466037 + MGP_WSBEiJ_P0052797 Dolpp1 protein_coding protein_coding MGP_WSBEiJ_T0052798.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457935 28462825 + Dolpp1 protein_coding retained_intron MGP_WSBEiJ_T0052799.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457937 28461421 + Dolpp1 protein_coding retained_intron MGP_WSBEiJ_T0052800.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457946 28466038 + MGP_WSBEiJ_P0052800 Dolpp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052801.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457947 28461666 + Dolpp1 protein_coding retained_intron MGP_WSBEiJ_T0052802.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457952 28465194 + MGP_WSBEiJ_P0052802 Dolpp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052803.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28457961 28463323 + Dolpp1 protein_coding retained_intron MGP_WSBEiJ_T0052804.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28461107 28466037 + Dolpp1 protein_coding processed_transcript MGP_WSBEiJ_T0052805.1 MGP_WSBEiJ_G0024832.1 mouse_genomes_project 2 28462930 28465498 + Dolpp1 protein_coding processed_transcript MGP_WSBEiJ_T0013154.1 MGP_WSBEiJ_G0011284.1 mouse_genomes_project 2 37432513 37433581 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054230.1 MGP_WSBEiJ_G0025088.1 mouse_genomes_project 2 71268833 71274701 + MGP_WSBEiJ_P0054230 Dlx1 protein_coding protein_coding MGP_WSBEiJ_T0054231.1 MGP_WSBEiJ_G0025088.1 mouse_genomes_project 2 71269403 71270786 + MGP_WSBEiJ_P0054231 Dlx1 protein_coding protein_coding MGP_WSBEiJ_T0054232.1 MGP_WSBEiJ_G0025088.1 mouse_genomes_project 2 71269821 71270952 + MGP_WSBEiJ_P0054232 Dlx1 protein_coding protein_coding MGP_WSBEiJ_T0054233.1 MGP_WSBEiJ_G0025088.1 mouse_genomes_project 2 71270573 71273240 + MGP_WSBEiJ_P0054233 Dlx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054234.1 MGP_WSBEiJ_G0025088.1 mouse_genomes_project 2 71270667 71274702 + Dlx1 protein_coding retained_intron MGP_WSBEiJ_T0054235.1 MGP_WSBEiJ_G0025088.1 mouse_genomes_project 2 71271500 71273410 + Dlx1 protein_coding retained_intron MGP_WSBEiJ_T0013284.1 MGP_WSBEiJ_G0011414.1 mouse_genomes_project 2 86228278 86229210 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057245.1 MGP_WSBEiJ_G0025907.1 mouse_genomes_project 2 155883131 155887584 - MGP_WSBEiJ_P0057245 Sox12 protein_coding protein_coding MGP_WSBEiJ_T0057246.1 MGP_WSBEiJ_G0025907.1 mouse_genomes_project 2 155883134 155887567 - MGP_WSBEiJ_P0057246 Sox12 protein_coding protein_coding MGP_WSBEiJ_T0054713.1 MGP_WSBEiJ_G0025213.1 mouse_genomes_project 2 86570156 86572115 - MGP_WSBEiJ_P0054713 Olfr1037 protein_coding protein_coding MGP_WSBEiJ_T0052243.1 MGP_WSBEiJ_G0024741.1 mouse_genomes_project 2 23719359 23806548 - MGP_WSBEiJ_P0052243 protein_coding unknown_likely_coding MGP_WSBEiJ_T0052244.1 MGP_WSBEiJ_G0024741.1 mouse_genomes_project 2 23719565 23725192 - protein_coding processed_transcript MGP_WSBEiJ_T0052245.1 MGP_WSBEiJ_G0024741.1 mouse_genomes_project 2 23719576 23724245 - protein_coding processed_transcript MGP_WSBEiJ_T0052246.1 MGP_WSBEiJ_G0024741.1 mouse_genomes_project 2 23734382 23786478 - MGP_WSBEiJ_P0052246 protein_coding protein_coding MGP_WSBEiJ_T0052247.1 MGP_WSBEiJ_G0024741.1 mouse_genomes_project 2 23734401 23757443 - MGP_WSBEiJ_P0052247 protein_coding protein_coding MGP_WSBEiJ_T0052248.1 MGP_WSBEiJ_G0024741.1 mouse_genomes_project 2 23734575 23786386 - MGP_WSBEiJ_P0052248 protein_coding protein_coding MGP_WSBEiJ_T0052249.1 MGP_WSBEiJ_G0024741.1 mouse_genomes_project 2 23746812 23806818 - MGP_WSBEiJ_P0052249 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052250.1 MGP_WSBEiJ_G0024741.1 mouse_genomes_project 2 23757436 23806666 - MGP_WSBEiJ_P0052250 protein_coding protein_coding MGP_WSBEiJ_T0052403.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24780545 24781924 - Surf1 protein_coding retained_intron MGP_WSBEiJ_T0052404.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24780547 24783465 - MGP_WSBEiJ_P0052404 Surf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052405.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24780547 24783633 - MGP_WSBEiJ_P0052405 Surf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052406.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24780547 24783695 - MGP_WSBEiJ_P0052406 Surf1 protein_coding protein_coding MGP_WSBEiJ_T0052407.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24780741 24783485 - MGP_WSBEiJ_P0052407 Surf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052408.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24780741 24783510 - MGP_WSBEiJ_P0052408 Surf1 protein_coding protein_coding MGP_WSBEiJ_T0052409.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24781395 24783476 - Surf1 protein_coding retained_intron MGP_WSBEiJ_T0052410.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24781639 24782657 - Surf1 protein_coding retained_intron MGP_WSBEiJ_T0052411.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24782022 24783497 - MGP_WSBEiJ_P0052411 Surf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052412.1 MGP_WSBEiJ_G0024766.1 mouse_genomes_project 2 24782621 24783510 - MGP_WSBEiJ_P0052412 Surf1 protein_coding protein_coding MGP_WSBEiJ_T0054727.1 MGP_WSBEiJ_G0025227.1 mouse_genomes_project 2 86868200 86869136 - MGP_WSBEiJ_P0054727 Olfr1055 protein_coding protein_coding MGP_WSBEiJ_T0056959.1 MGP_WSBEiJ_G0025828.1 mouse_genomes_project 2 146207605 146210838 + MGP_WSBEiJ_P0056959 Otor protein_coding protein_coding MGP_WSBEiJ_T0007103.1 MGP_WSBEiJ_G0005827.1 mouse_genomes_project 2 59205852 59207549 + Gm13572 lincRNA lincRNA MGP_WSBEiJ_T0099350.1 MGP_WSBEiJ_G0038013.1 mouse_genomes_project 2 45071172 45071295 + Gm23072 snoRNA snoRNA MGP_WSBEiJ_T0058691.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186167626 186184443 + MGP_WSBEiJ_P0058691 Arfgap1 protein_coding protein_coding MGP_WSBEiJ_T0058692.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186167635 186184511 + MGP_WSBEiJ_P0058692 Arfgap1 protein_coding protein_coding MGP_WSBEiJ_T0058693.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186167646 186183685 + MGP_WSBEiJ_P0058693 Arfgap1 protein_coding protein_coding MGP_WSBEiJ_T0058694.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186167666 186184445 + Arfgap1 protein_coding retained_intron MGP_WSBEiJ_T0058695.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186167668 186184431 + Arfgap1 protein_coding processed_transcript MGP_WSBEiJ_T0058696.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186167678 186184445 + MGP_WSBEiJ_P0058696 Arfgap1 protein_coding protein_coding MGP_WSBEiJ_T0058697.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186167680 186174917 + Arfgap1 protein_coding retained_intron MGP_WSBEiJ_T0058698.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186167701 186184296 + MGP_WSBEiJ_P0058698 Arfgap1 protein_coding protein_coding MGP_WSBEiJ_T0058699.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186173027 186183458 + MGP_WSBEiJ_P0058699 Arfgap1 protein_coding protein_coding MGP_WSBEiJ_T0058700.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186173042 186183355 + MGP_WSBEiJ_P0058700 Arfgap1 protein_coding protein_coding MGP_WSBEiJ_T0058701.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186175473 186178738 + Arfgap1 protein_coding retained_intron MGP_WSBEiJ_T0058702.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186175490 186180027 + Arfgap1 protein_coding retained_intron MGP_WSBEiJ_T0058703.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186175818 186179510 + Arfgap1 protein_coding retained_intron MGP_WSBEiJ_T0058704.1 MGP_WSBEiJ_G0026254.1 mouse_genomes_project 2 186182333 186183382 + Arfgap1 protein_coding processed_transcript MGP_WSBEiJ_T0007242.1 MGP_WSBEiJ_G0005941.1 mouse_genomes_project 2 151225931 151260846 - 9030622O22Rik lincRNA lincRNA MGP_WSBEiJ_T0007243.1 MGP_WSBEiJ_G0005941.1 mouse_genomes_project 2 151257366 151332775 - 9030622O22Rik lincRNA lincRNA MGP_WSBEiJ_T0007244.1 MGP_WSBEiJ_G0005941.1 mouse_genomes_project 2 151257520 151330844 - 9030622O22Rik lincRNA lincRNA MGP_WSBEiJ_T0054909.1 MGP_WSBEiJ_G0025374.1 mouse_genomes_project 2 90854646 90855555 - MGP_WSBEiJ_P0054909 Olfr140 protein_coding protein_coding MGP_WSBEiJ_T0054910.1 MGP_WSBEiJ_G0025374.1 mouse_genomes_project 2 90854646 90867152 - MGP_WSBEiJ_P0054910 Olfr140 protein_coding protein_coding MGP_WSBEiJ_T0003822.1 MGP_WSBEiJ_G0003419.1 mouse_genomes_project 2 8850968 8860305 + Gm10851 antisense antisense MGP_WSBEiJ_T0007081.1 MGP_WSBEiJ_G0005808.1 mouse_genomes_project 2 35529437 35530314 - Gm13434 lincRNA lincRNA MGP_WSBEiJ_T0013076.1 MGP_WSBEiJ_G0011206.1 mouse_genomes_project 2 8209407 8210218 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001045.1 MGP_WSBEiJ_G0000980.1 mouse_genomes_project 2 37351320 37354687 + TEC TEC MGP_WSBEiJ_T0052129.1 MGP_WSBEiJ_G0024714.1 mouse_genomes_project 2 23220754 23222593 + Clic3 protein_coding processed_transcript MGP_WSBEiJ_T0052130.1 MGP_WSBEiJ_G0024714.1 mouse_genomes_project 2 23220754 23222693 + MGP_WSBEiJ_P0052130 Clic3 protein_coding protein_coding MGP_WSBEiJ_T0052131.1 MGP_WSBEiJ_G0024714.1 mouse_genomes_project 2 23220765 23222693 + MGP_WSBEiJ_P0052131 Clic3 protein_coding protein_coding MGP_WSBEiJ_T0052132.1 MGP_WSBEiJ_G0024714.1 mouse_genomes_project 2 23220807 23222693 + Clic3 protein_coding processed_transcript MGP_WSBEiJ_T0052133.1 MGP_WSBEiJ_G0024714.1 mouse_genomes_project 2 23220813 23222600 + Clic3 protein_coding processed_transcript MGP_WSBEiJ_T0052134.1 MGP_WSBEiJ_G0024714.1 mouse_genomes_project 2 23221552 23222132 + Clic3 protein_coding processed_transcript MGP_WSBEiJ_T0001037.1 MGP_WSBEiJ_G0000972.1 mouse_genomes_project 2 34717339 34719349 - TEC TEC MGP_WSBEiJ_T0098111.1 MGP_WSBEiJ_G0036774.1 mouse_genomes_project 2 85109958 85110059 + Gm27942 snRNA snRNA MGP_WSBEiJ_T0053080.1 MGP_WSBEiJ_G0024870.1 mouse_genomes_project 2 30639061 30642151 - Lcn2 protein_coding processed_transcript MGP_WSBEiJ_T0053081.1 MGP_WSBEiJ_G0024870.1 mouse_genomes_project 2 30639061 30642226 - MGP_WSBEiJ_P0053081 Lcn2 protein_coding protein_coding MGP_WSBEiJ_T0053082.1 MGP_WSBEiJ_G0024870.1 mouse_genomes_project 2 30639067 30640428 - Lcn2 protein_coding retained_intron MGP_WSBEiJ_T0053083.1 MGP_WSBEiJ_G0024870.1 mouse_genomes_project 2 30639611 30640536 - Lcn2 protein_coding retained_intron MGP_WSBEiJ_T0053084.1 MGP_WSBEiJ_G0024870.1 mouse_genomes_project 2 30639873 30642681 - MGP_WSBEiJ_P0053084 Lcn2 protein_coding protein_coding MGP_WSBEiJ_T0053085.1 MGP_WSBEiJ_G0024870.1 mouse_genomes_project 2 30640984 30642188 - Lcn2 protein_coding retained_intron MGP_WSBEiJ_T0056893.1 MGP_WSBEiJ_G0025812.1 mouse_genomes_project 2 139378946 139392564 + protein_coding processed_transcript MGP_WSBEiJ_T0056894.1 MGP_WSBEiJ_G0025812.1 mouse_genomes_project 2 139378991 139383794 + protein_coding processed_transcript MGP_WSBEiJ_T0056895.1 MGP_WSBEiJ_G0025812.1 mouse_genomes_project 2 139379027 139428768 + MGP_WSBEiJ_P0056895 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056896.1 MGP_WSBEiJ_G0025812.1 mouse_genomes_project 2 139379217 139391263 + protein_coding processed_transcript MGP_WSBEiJ_T0056897.1 MGP_WSBEiJ_G0025812.1 mouse_genomes_project 2 139392567 139427466 + MGP_WSBEiJ_P0056897 protein_coding protein_coding MGP_WSBEiJ_T0056898.1 MGP_WSBEiJ_G0025812.1 mouse_genomes_project 2 139412121 139439429 + MGP_WSBEiJ_P0056898 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056899.1 MGP_WSBEiJ_G0025812.1 mouse_genomes_project 2 139430235 139431030 + protein_coding processed_transcript MGP_WSBEiJ_T0056900.1 MGP_WSBEiJ_G0025812.1 mouse_genomes_project 2 139430250 139433211 + protein_coding processed_transcript MGP_WSBEiJ_T0001046.1 MGP_WSBEiJ_G0000981.1 mouse_genomes_project 2 37685702 37689182 - TEC TEC MGP_WSBEiJ_T0017175.1 MGP_WSBEiJ_G0014835.1 mouse_genomes_project 2 33992388 34001509 - Gm13446 processed_transcript processed_transcript MGP_WSBEiJ_T0017176.1 MGP_WSBEiJ_G0014835.1 mouse_genomes_project 2 33997693 34001292 - Gm13446 processed_transcript processed_transcript MGP_WSBEiJ_T0007072.1 MGP_WSBEiJ_G0005802.1 mouse_genomes_project 2 32319910 32322038 + Gm13404 lincRNA lincRNA MGP_WSBEiJ_T0053459.1 MGP_WSBEiJ_G0024944.1 mouse_genomes_project 2 35350649 35351603 + MGP_WSBEiJ_P0053459 Olfr354 protein_coding protein_coding MGP_WSBEiJ_T0055179.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93189556 93195565 - MGP_WSBEiJ_P0055179 Gyltl1b protein_coding protein_coding MGP_WSBEiJ_T0055180.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93189556 93195494 - MGP_WSBEiJ_P0055180 Gyltl1b protein_coding protein_coding MGP_WSBEiJ_T0055181.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93189557 93195544 - Gyltl1b protein_coding retained_intron MGP_WSBEiJ_T0055182.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93189561 93195526 - MGP_WSBEiJ_P0055182 Gyltl1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055183.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93189562 93195519 - MGP_WSBEiJ_P0055183 Gyltl1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055184.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93189570 93195536 - MGP_WSBEiJ_P0055184 Gyltl1b protein_coding protein_coding MGP_WSBEiJ_T0055185.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93189570 93196475 - MGP_WSBEiJ_P0055185 Gyltl1b protein_coding protein_coding MGP_WSBEiJ_T0055186.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93189581 93195541 - MGP_WSBEiJ_P0055186 Gyltl1b protein_coding protein_coding MGP_WSBEiJ_T0055187.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93190302 93191032 - Gyltl1b protein_coding retained_intron MGP_WSBEiJ_T0055188.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93190485 93191287 - Gyltl1b protein_coding retained_intron MGP_WSBEiJ_T0055189.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93191528 93193985 - Gyltl1b protein_coding retained_intron MGP_WSBEiJ_T0055190.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93191824 93194172 - Gyltl1b protein_coding processed_transcript MGP_WSBEiJ_T0055191.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93191897 93194581 - Gyltl1b protein_coding retained_intron MGP_WSBEiJ_T0055192.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93192579 93195541 - Gyltl1b protein_coding retained_intron MGP_WSBEiJ_T0055193.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93194216 93195526 - Gyltl1b protein_coding retained_intron MGP_WSBEiJ_T0055194.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93194442 93199378 - MGP_WSBEiJ_P0055194 Gyltl1b protein_coding protein_coding MGP_WSBEiJ_T0055195.1 MGP_WSBEiJ_G0025417.1 mouse_genomes_project 2 93194492 93196453 - Gyltl1b protein_coding retained_intron MGP_WSBEiJ_T0004072.1 MGP_WSBEiJ_G0003604.1 mouse_genomes_project 2 167728118 167729070 + 0610039K10Rik antisense antisense MGP_WSBEiJ_T0004073.1 MGP_WSBEiJ_G0003604.1 mouse_genomes_project 2 167728118 167729069 + 0610039K10Rik antisense antisense MGP_WSBEiJ_T0055847.1 MGP_WSBEiJ_G0025589.1 mouse_genomes_project 2 121247702 121260802 + MGP_WSBEiJ_P0055847 Spint1 protein_coding protein_coding MGP_WSBEiJ_T0055848.1 MGP_WSBEiJ_G0025589.1 mouse_genomes_project 2 121247817 121260483 + MGP_WSBEiJ_P0055848 Spint1 protein_coding protein_coding MGP_WSBEiJ_T0055849.1 MGP_WSBEiJ_G0025589.1 mouse_genomes_project 2 121247893 121260815 + MGP_WSBEiJ_P0055849 Spint1 protein_coding protein_coding MGP_WSBEiJ_T0055850.1 MGP_WSBEiJ_G0025589.1 mouse_genomes_project 2 121257655 121260190 + Spint1 protein_coding retained_intron MGP_WSBEiJ_T0055851.1 MGP_WSBEiJ_G0025589.1 mouse_genomes_project 2 121259492 121260337 + Spint1 protein_coding retained_intron MGP_WSBEiJ_T0010178.1 MGP_WSBEiJ_G0008335.1 mouse_genomes_project 2 7781829 7781923 + Mir466f-3 miRNA miRNA MGP_WSBEiJ_T0013104.1 MGP_WSBEiJ_G0011234.1 mouse_genomes_project 2 16708998 16710396 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011314.1 MGP_WSBEiJ_G0009471.1 mouse_genomes_project 2 133345582 133345953 - Gm24893 misc_RNA misc_RNA MGP_WSBEiJ_T0098126.1 MGP_WSBEiJ_G0036789.1 mouse_genomes_project 2 135754263 135754431 + Gm25704 snRNA snRNA MGP_WSBEiJ_T0013096.1 MGP_WSBEiJ_G0011226.1 mouse_genomes_project 2 15349432 15350583 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055629.1 MGP_WSBEiJ_G0025534.1 mouse_genomes_project 2 113827373 113830440 - MGP_WSBEiJ_P0055629 protein_coding protein_coding MGP_WSBEiJ_T0013389.1 MGP_WSBEiJ_G0011519.1 mouse_genomes_project 2 131149356 131149566 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053455.1 MGP_WSBEiJ_G0024940.1 mouse_genomes_project 2 35290218 35291157 + MGP_WSBEiJ_P0053455 Olfr350 protein_coding protein_coding MGP_WSBEiJ_T0051390.1 MGP_WSBEiJ_G0024590.1 mouse_genomes_project 2 2946534 2973665 + MGP_WSBEiJ_P0051390 Nudt5 protein_coding protein_coding MGP_WSBEiJ_T0051391.1 MGP_WSBEiJ_G0024590.1 mouse_genomes_project 2 2946549 2970563 + MGP_WSBEiJ_P0051391 Nudt5 protein_coding protein_coding MGP_WSBEiJ_T0051392.1 MGP_WSBEiJ_G0024590.1 mouse_genomes_project 2 2946576 2972742 + MGP_WSBEiJ_P0051392 Nudt5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051393.1 MGP_WSBEiJ_G0024590.1 mouse_genomes_project 2 2946768 2959282 + Nudt5 protein_coding retained_intron MGP_WSBEiJ_T0051394.1 MGP_WSBEiJ_G0024590.1 mouse_genomes_project 2 2946768 2966310 + MGP_WSBEiJ_P0051394 Nudt5 protein_coding protein_coding MGP_WSBEiJ_T0051395.1 MGP_WSBEiJ_G0024590.1 mouse_genomes_project 2 2946805 2964250 + MGP_WSBEiJ_P0051395 Nudt5 protein_coding protein_coding MGP_WSBEiJ_T0051396.1 MGP_WSBEiJ_G0024590.1 mouse_genomes_project 2 2949648 2963097 + Nudt5 protein_coding processed_transcript MGP_WSBEiJ_T0053089.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30672601 30689227 - MGP_WSBEiJ_P0053089 Slc25a25 protein_coding protein_coding MGP_WSBEiJ_T0053090.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30672601 30709543 - MGP_WSBEiJ_P0053090 Slc25a25 protein_coding protein_coding MGP_WSBEiJ_T0053091.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30672604 30709566 - MGP_WSBEiJ_P0053091 Slc25a25 protein_coding protein_coding MGP_WSBEiJ_T0053092.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30673084 30688860 - MGP_WSBEiJ_P0053092 Slc25a25 protein_coding protein_coding MGP_WSBEiJ_T0053093.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30673174 30682120 - MGP_WSBEiJ_P0053093 Slc25a25 protein_coding protein_coding MGP_WSBEiJ_T0053094.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30674323 30674686 - Slc25a25 protein_coding retained_intron MGP_WSBEiJ_T0053095.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30675206 30678565 - Slc25a25 protein_coding retained_intron MGP_WSBEiJ_T0053096.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30675286 30675945 - Slc25a25 protein_coding retained_intron MGP_WSBEiJ_T0053097.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30675532 30689213 - MGP_WSBEiJ_P0053097 Slc25a25 protein_coding protein_coding MGP_WSBEiJ_T0053098.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30677162 30680095 - MGP_WSBEiJ_P0053098 Slc25a25 protein_coding protein_coding MGP_WSBEiJ_T0053099.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30677244 30689212 - MGP_WSBEiJ_P0053099 Slc25a25 protein_coding protein_coding MGP_WSBEiJ_T0053100.1 MGP_WSBEiJ_G0024872.1 mouse_genomes_project 2 30685456 30689277 - Slc25a25 protein_coding retained_intron MGP_WSBEiJ_T0054871.1 MGP_WSBEiJ_G0025351.1 mouse_genomes_project 2 90265065 90266010 - MGP_WSBEiJ_P0054871 Olfr1240 protein_coding protein_coding MGP_WSBEiJ_T0007089.1 MGP_WSBEiJ_G0005815.1 mouse_genomes_project 2 45186251 45210603 - Gm13470 lincRNA lincRNA MGP_WSBEiJ_T0003963.1 MGP_WSBEiJ_G0003524.1 mouse_genomes_project 2 106474233 106487523 - Wt1os antisense antisense MGP_WSBEiJ_T0003964.1 MGP_WSBEiJ_G0003524.1 mouse_genomes_project 2 106474544 106527375 - Wt1os antisense antisense MGP_WSBEiJ_T0003965.1 MGP_WSBEiJ_G0003524.1 mouse_genomes_project 2 106475594 106475795 - Wt1os antisense antisense MGP_WSBEiJ_T0003966.1 MGP_WSBEiJ_G0003524.1 mouse_genomes_project 2 106492791 106527268 - Wt1os antisense antisense MGP_WSBEiJ_T0003907.1 MGP_WSBEiJ_G0003483.1 mouse_genomes_project 2 61644819 61763939 + Gm13561 antisense antisense MGP_WSBEiJ_T0097204.1 MGP_WSBEiJ_G0035885.1 mouse_genomes_project 2 105361891 105362030 + Gm24644 scaRNA scaRNA MGP_WSBEiJ_T0053116.1 MGP_WSBEiJ_G0024878.1 mouse_genomes_project 2 30855522 30868126 + MGP_WSBEiJ_P0053116 St6galnac4 protein_coding protein_coding MGP_WSBEiJ_T0053117.1 MGP_WSBEiJ_G0024878.1 mouse_genomes_project 2 30855566 30862703 + St6galnac4 protein_coding retained_intron MGP_WSBEiJ_T0053118.1 MGP_WSBEiJ_G0024878.1 mouse_genomes_project 2 30856008 30866129 + St6galnac4 protein_coding retained_intron MGP_WSBEiJ_T0053119.1 MGP_WSBEiJ_G0024878.1 mouse_genomes_project 2 30856052 30867503 + MGP_WSBEiJ_P0053119 St6galnac4 protein_coding protein_coding MGP_WSBEiJ_T0053120.1 MGP_WSBEiJ_G0024878.1 mouse_genomes_project 2 30862703 30865617 + MGP_WSBEiJ_P0053120 St6galnac4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003893.1 MGP_WSBEiJ_G0003474.1 mouse_genomes_project 2 37496740 37498286 - Gm13496 antisense antisense MGP_WSBEiJ_T0000994.1 MGP_WSBEiJ_G0000929.1 mouse_genomes_project 2 8328140 8328251 - TEC TEC MGP_WSBEiJ_T0099346.1 MGP_WSBEiJ_G0038009.1 mouse_genomes_project 2 35834551 35834662 - Snord90 snoRNA snoRNA MGP_WSBEiJ_T0001007.1 MGP_WSBEiJ_G0000942.1 mouse_genomes_project 2 10393314 10395919 + TEC TEC MGP_WSBEiJ_T0013419.1 MGP_WSBEiJ_G0011549.1 mouse_genomes_project 2 146284669 146285470 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007106.1 MGP_WSBEiJ_G0005830.1 mouse_genomes_project 2 61727477 61731731 - Gm13565 lincRNA lincRNA MGP_WSBEiJ_T0097307.1 MGP_WSBEiJ_G0035982.1 mouse_genomes_project 2 318897 322236 - Gm37525 sense_intronic sense_intronic MGP_WSBEiJ_T0055280.1 MGP_WSBEiJ_G0025435.1 mouse_genomes_project 2 94870277 94906190 - MGP_WSBEiJ_P0055280 Gm27027 protein_coding protein_coding MGP_WSBEiJ_T0013393.1 MGP_WSBEiJ_G0011523.1 mouse_genomes_project 2 133021788 133022620 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013157.1 MGP_WSBEiJ_G0011287.1 mouse_genomes_project 2 37744069 37744385 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053770.1 MGP_WSBEiJ_G0025006.1 mouse_genomes_project 2 54473532 54647269 + MGP_WSBEiJ_P0053770 Kcnj3 protein_coding protein_coding MGP_WSBEiJ_T0053771.1 MGP_WSBEiJ_G0025006.1 mouse_genomes_project 2 54474718 54644654 + MGP_WSBEiJ_P0053771 Kcnj3 protein_coding protein_coding MGP_WSBEiJ_T0053772.1 MGP_WSBEiJ_G0025006.1 mouse_genomes_project 2 54474727 54647264 + MGP_WSBEiJ_P0053772 Kcnj3 protein_coding protein_coding MGP_WSBEiJ_T0058052.1 MGP_WSBEiJ_G0026095.1 mouse_genomes_project 2 168452059 168453720 + MGP_WSBEiJ_P0058052 Svs5 protein_coding protein_coding MGP_WSBEiJ_T0058053.1 MGP_WSBEiJ_G0026095.1 mouse_genomes_project 2 168452773 168453720 + MGP_WSBEiJ_P0058053 Svs5 protein_coding protein_coding MGP_WSBEiJ_T0013454.1 MGP_WSBEiJ_G0011584.1 mouse_genomes_project 2 156105879 156106096 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054214.1 MGP_WSBEiJ_G0025085.1 mouse_genomes_project 2 70980676 71084356 - MGP_WSBEiJ_P0054214 Slc25a12 protein_coding protein_coding MGP_WSBEiJ_T0054215.1 MGP_WSBEiJ_G0025085.1 mouse_genomes_project 2 70984358 71084140 - MGP_WSBEiJ_P0054215 Slc25a12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054216.1 MGP_WSBEiJ_G0025085.1 mouse_genomes_project 2 70984745 71005264 - Slc25a12 protein_coding processed_transcript MGP_WSBEiJ_T0054217.1 MGP_WSBEiJ_G0025085.1 mouse_genomes_project 2 70989239 70992468 - Slc25a12 protein_coding retained_intron MGP_WSBEiJ_T0054218.1 MGP_WSBEiJ_G0025085.1 mouse_genomes_project 2 71024981 71041372 - Slc25a12 protein_coding processed_transcript MGP_WSBEiJ_T0054219.1 MGP_WSBEiJ_G0025085.1 mouse_genomes_project 2 71042271 71059507 - Slc25a12 protein_coding processed_transcript MGP_WSBEiJ_T0054220.1 MGP_WSBEiJ_G0025085.1 mouse_genomes_project 2 71059364 71063283 - Slc25a12 protein_coding processed_transcript MGP_WSBEiJ_T0054565.1 MGP_WSBEiJ_G0025158.1 mouse_genomes_project 2 84319046 84321619 + MGP_WSBEiJ_P0054565 protein_coding protein_coding MGP_WSBEiJ_T0017220.1 MGP_WSBEiJ_G0014866.1 mouse_genomes_project 2 93713288 93773350 - Gm13791 processed_transcript processed_transcript MGP_WSBEiJ_T0055105.1 MGP_WSBEiJ_G0025406.1 mouse_genomes_project 2 92405227 92411352 - MGP_WSBEiJ_P0055105 Zfp408 protein_coding protein_coding MGP_WSBEiJ_T0055106.1 MGP_WSBEiJ_G0025406.1 mouse_genomes_project 2 92405247 92411364 - MGP_WSBEiJ_P0055106 Zfp408 protein_coding protein_coding MGP_WSBEiJ_T0055107.1 MGP_WSBEiJ_G0025406.1 mouse_genomes_project 2 92407847 92409805 - Zfp408 protein_coding retained_intron MGP_WSBEiJ_T0055108.1 MGP_WSBEiJ_G0025406.1 mouse_genomes_project 2 92409237 92411332 - MGP_WSBEiJ_P0055108 Zfp408 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055109.1 MGP_WSBEiJ_G0025406.1 mouse_genomes_project 2 92409585 92411316 - Zfp408 protein_coding processed_transcript MGP_WSBEiJ_T0055110.1 MGP_WSBEiJ_G0025406.1 mouse_genomes_project 2 92410508 92411333 - Zfp408 protein_coding processed_transcript MGP_WSBEiJ_T0013233.1 MGP_WSBEiJ_G0011363.1 mouse_genomes_project 2 68920844 68921348 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054837.1 MGP_WSBEiJ_G0025323.1 mouse_genomes_project 2 89658467 89694662 + MGP_WSBEiJ_P0054837 protein_coding protein_coding MGP_WSBEiJ_T0054719.1 MGP_WSBEiJ_G0025219.1 mouse_genomes_project 2 86687712 86688672 - MGP_WSBEiJ_P0054719 Olfr52 protein_coding protein_coding MGP_WSBEiJ_T0053028.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30531464 30541859 + MGP_WSBEiJ_P0053028 Golga2 protein_coding protein_coding MGP_WSBEiJ_T0053029.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30532332 30551997 + MGP_WSBEiJ_P0053029 Golga2 protein_coding protein_coding MGP_WSBEiJ_T0053030.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30532392 30551988 + MGP_WSBEiJ_P0053030 Golga2 protein_coding protein_coding MGP_WSBEiJ_T0053031.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30532405 30541336 + Golga2 protein_coding retained_intron MGP_WSBEiJ_T0053032.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30532412 30547035 + MGP_WSBEiJ_P0053032 Golga2 protein_coding protein_coding MGP_WSBEiJ_T0053033.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30532425 30551989 + MGP_WSBEiJ_P0053033 Golga2 protein_coding protein_coding MGP_WSBEiJ_T0053034.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30532430 30543393 + MGP_WSBEiJ_P0053034 Golga2 protein_coding protein_coding MGP_WSBEiJ_T0053035.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30532434 30546276 + MGP_WSBEiJ_P0053035 Golga2 protein_coding protein_coding MGP_WSBEiJ_T0053036.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30541162 30551986 + Golga2 protein_coding retained_intron MGP_WSBEiJ_T0053037.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30542871 30543354 + Golga2 protein_coding retained_intron MGP_WSBEiJ_T0053038.1 MGP_WSBEiJ_G0024866.1 mouse_genomes_project 2 30545288 30547025 + Golga2 protein_coding retained_intron MGP_WSBEiJ_T0100689.1 MGP_WSBEiJ_G0039147.1 mouse_genomes_project 2 34803548 34804001 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007248.1 MGP_WSBEiJ_G0005945.1 mouse_genomes_project 2 154171445 154173927 - Gm26681 lincRNA lincRNA MGP_WSBEiJ_T0051938.1 MGP_WSBEiJ_G0024681.1 mouse_genomes_project 2 22684904 22697503 + MGP_WSBEiJ_P0051938 Dph7 protein_coding protein_coding MGP_WSBEiJ_T0051939.1 MGP_WSBEiJ_G0024681.1 mouse_genomes_project 2 22684926 22697501 + MGP_WSBEiJ_P0051939 Dph7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051940.1 MGP_WSBEiJ_G0024681.1 mouse_genomes_project 2 22684927 22692486 + MGP_WSBEiJ_P0051940 Dph7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051941.1 MGP_WSBEiJ_G0024681.1 mouse_genomes_project 2 22684930 22695575 + MGP_WSBEiJ_P0051941 Dph7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051942.1 MGP_WSBEiJ_G0024681.1 mouse_genomes_project 2 22684945 22689042 + MGP_WSBEiJ_P0051942 Dph7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051943.1 MGP_WSBEiJ_G0024681.1 mouse_genomes_project 2 22684956 22688997 + MGP_WSBEiJ_P0051943 Dph7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051944.1 MGP_WSBEiJ_G0024681.1 mouse_genomes_project 2 22684970 22697503 + Dph7 protein_coding retained_intron MGP_WSBEiJ_T0051945.1 MGP_WSBEiJ_G0024681.1 mouse_genomes_project 2 22684977 22693234 + MGP_WSBEiJ_P0051945 Dph7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013402.1 MGP_WSBEiJ_G0011532.1 mouse_genomes_project 2 135389449 135390054 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013467.1 MGP_WSBEiJ_G0011597.1 mouse_genomes_project 2 160053403 160055628 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054330.1 MGP_WSBEiJ_G0025106.1 mouse_genomes_project 2 73793644 73796519 - MGP_WSBEiJ_P0054330 Atp5g3 protein_coding protein_coding MGP_WSBEiJ_T0054331.1 MGP_WSBEiJ_G0025106.1 mouse_genomes_project 2 73793644 73796518 - MGP_WSBEiJ_P0054331 Atp5g3 protein_coding protein_coding MGP_WSBEiJ_T0054332.1 MGP_WSBEiJ_G0025106.1 mouse_genomes_project 2 73793928 73796475 - Atp5g3 protein_coding processed_transcript MGP_WSBEiJ_T0054333.1 MGP_WSBEiJ_G0025106.1 mouse_genomes_project 2 73794380 73795652 - Atp5g3 protein_coding processed_transcript MGP_WSBEiJ_T0054334.1 MGP_WSBEiJ_G0025106.1 mouse_genomes_project 2 73794515 73796484 - Atp5g3 protein_coding processed_transcript MGP_WSBEiJ_T0057396.1 MGP_WSBEiJ_G0025957.1 mouse_genomes_project 2 157775495 157781415 + MGP_WSBEiJ_P0057396 Bpifa5 protein_coding protein_coding MGP_WSBEiJ_T0007135.1 MGP_WSBEiJ_G0005854.1 mouse_genomes_project 2 75079935 75110453 - A330043C09Rik lincRNA lincRNA MGP_WSBEiJ_T0058087.1 MGP_WSBEiJ_G0026105.1 mouse_genomes_project 2 168709121 168710259 + Wfdc2 protein_coding processed_transcript MGP_WSBEiJ_T0058088.1 MGP_WSBEiJ_G0026105.1 mouse_genomes_project 2 168709287 168715282 + MGP_WSBEiJ_P0058088 Wfdc2 protein_coding protein_coding MGP_WSBEiJ_T0058089.1 MGP_WSBEiJ_G0026105.1 mouse_genomes_project 2 168709407 168715282 + MGP_WSBEiJ_P0058089 Wfdc2 protein_coding protein_coding MGP_WSBEiJ_T0058090.1 MGP_WSBEiJ_G0026105.1 mouse_genomes_project 2 168709422 168715282 + MGP_WSBEiJ_P0058090 Wfdc2 protein_coding protein_coding MGP_WSBEiJ_T0058091.1 MGP_WSBEiJ_G0026105.1 mouse_genomes_project 2 168709727 168710888 + MGP_WSBEiJ_P0058091 Wfdc2 protein_coding protein_coding MGP_WSBEiJ_T0052497.1 MGP_WSBEiJ_G0024784.1 mouse_genomes_project 2 25999052 26007560 - MGP_WSBEiJ_P0052497 Fcnb protein_coding protein_coding MGP_WSBEiJ_T0052498.1 MGP_WSBEiJ_G0024784.1 mouse_genomes_project 2 26000773 26007560 - MGP_WSBEiJ_P0052498 Fcnb protein_coding protein_coding MGP_WSBEiJ_T0052499.1 MGP_WSBEiJ_G0024784.1 mouse_genomes_project 2 26002413 26007560 - MGP_WSBEiJ_P0052499 Fcnb protein_coding protein_coding MGP_WSBEiJ_T0003859.1 MGP_WSBEiJ_G0003446.1 mouse_genomes_project 2 25199454 25204051 + AA645442 antisense antisense MGP_WSBEiJ_T0056340.1 MGP_WSBEiJ_G0025688.1 mouse_genomes_project 2 128262369 128293536 - MGP_WSBEiJ_P0056340 Cops2 protein_coding protein_coding MGP_WSBEiJ_T0056341.1 MGP_WSBEiJ_G0025688.1 mouse_genomes_project 2 128263664 128293436 - MGP_WSBEiJ_P0056341 Cops2 protein_coding protein_coding MGP_WSBEiJ_T0056342.1 MGP_WSBEiJ_G0025688.1 mouse_genomes_project 2 128263667 128293536 - MGP_WSBEiJ_P0056342 Cops2 protein_coding protein_coding MGP_WSBEiJ_T0056343.1 MGP_WSBEiJ_G0025688.1 mouse_genomes_project 2 128275693 128293393 - Cops2 protein_coding processed_transcript MGP_WSBEiJ_T0056344.1 MGP_WSBEiJ_G0025688.1 mouse_genomes_project 2 128284155 128293460 - Cops2 protein_coding processed_transcript MGP_WSBEiJ_T0058879.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186948482 186954459 + MGP_WSBEiJ_P0058879 Oprl1 protein_coding protein_coding MGP_WSBEiJ_T0058880.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186948508 186954449 + MGP_WSBEiJ_P0058880 Oprl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058881.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186948512 186952061 + MGP_WSBEiJ_P0058881 Oprl1 protein_coding protein_coding MGP_WSBEiJ_T0058882.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186948533 186954448 + MGP_WSBEiJ_P0058882 Oprl1 protein_coding protein_coding MGP_WSBEiJ_T0058883.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186948549 186954446 + MGP_WSBEiJ_P0058883 Oprl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058884.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186948560 186954448 + Oprl1 protein_coding processed_transcript MGP_WSBEiJ_T0058885.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186948567 186949845 + Oprl1 protein_coding processed_transcript MGP_WSBEiJ_T0058886.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186948814 186954446 + MGP_WSBEiJ_P0058886 Oprl1 protein_coding protein_coding MGP_WSBEiJ_T0058887.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186949059 186952822 + MGP_WSBEiJ_P0058887 Oprl1 protein_coding protein_coding MGP_WSBEiJ_T0058888.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186949168 186952843 + MGP_WSBEiJ_P0058888 Oprl1 protein_coding protein_coding MGP_WSBEiJ_T0058889.1 MGP_WSBEiJ_G0026283.1 mouse_genomes_project 2 186949169 186952843 + MGP_WSBEiJ_P0058889 Oprl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0007280.1 MGP_WSBEiJ_G0005974.1 mouse_genomes_project 2 170573800 170597348 + Gm11468 lincRNA lincRNA MGP_WSBEiJ_T0054161.1 MGP_WSBEiJ_G0025077.1 mouse_genomes_project 2 70232773 70248495 + MGP_WSBEiJ_P0054161 Gad1 protein_coding protein_coding MGP_WSBEiJ_T0054162.1 MGP_WSBEiJ_G0025077.1 mouse_genomes_project 2 70243271 70284679 + MGP_WSBEiJ_P0054162 Gad1 protein_coding protein_coding MGP_WSBEiJ_T0054163.1 MGP_WSBEiJ_G0025077.1 mouse_genomes_project 2 70243271 70269862 + MGP_WSBEiJ_P0054163 Gad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054164.1 MGP_WSBEiJ_G0025077.1 mouse_genomes_project 2 70243423 70259901 + Gad1 protein_coding retained_intron MGP_WSBEiJ_T0054165.1 MGP_WSBEiJ_G0025077.1 mouse_genomes_project 2 70243456 70267371 + MGP_WSBEiJ_P0054165 Gad1 protein_coding protein_coding MGP_WSBEiJ_T0054166.1 MGP_WSBEiJ_G0025077.1 mouse_genomes_project 2 70244160 70267891 + MGP_WSBEiJ_P0054166 Gad1 protein_coding protein_coding MGP_WSBEiJ_T0054167.1 MGP_WSBEiJ_G0025077.1 mouse_genomes_project 2 70244703 70268717 + MGP_WSBEiJ_P0054167 Gad1 protein_coding protein_coding MGP_WSBEiJ_T0054168.1 MGP_WSBEiJ_G0025077.1 mouse_genomes_project 2 70247638 70284677 + Gad1 protein_coding processed_transcript MGP_WSBEiJ_T0052226.1 MGP_WSBEiJ_G0024738.1 mouse_genomes_project 2 23604585 23606970 + MGP_WSBEiJ_P0052226 Lcn9 protein_coding protein_coding MGP_WSBEiJ_T0055138.1 MGP_WSBEiJ_G0025411.1 mouse_genomes_project 2 92715208 92716648 + MGP_WSBEiJ_P0055138 Chrm4 protein_coding protein_coding MGP_WSBEiJ_T0054657.1 MGP_WSBEiJ_G0025180.1 mouse_genomes_project 2 85422075 85461676 - MGP_WSBEiJ_P0054657 P2rx3 protein_coding protein_coding MGP_WSBEiJ_T0054658.1 MGP_WSBEiJ_G0025180.1 mouse_genomes_project 2 85422127 85463651 - MGP_WSBEiJ_P0054658 P2rx3 protein_coding protein_coding MGP_WSBEiJ_T0054659.1 MGP_WSBEiJ_G0025180.1 mouse_genomes_project 2 85422325 85461511 - MGP_WSBEiJ_P0054659 P2rx3 protein_coding protein_coding MGP_WSBEiJ_T0054660.1 MGP_WSBEiJ_G0025180.1 mouse_genomes_project 2 85449171 85459500 - P2rx3 protein_coding processed_transcript MGP_WSBEiJ_T0054661.1 MGP_WSBEiJ_G0025180.1 mouse_genomes_project 2 85457145 85459384 - P2rx3 protein_coding processed_transcript MGP_WSBEiJ_T0056407.1 MGP_WSBEiJ_G0025701.1 mouse_genomes_project 2 129472096 129499746 + Ap4e1 protein_coding retained_intron MGP_WSBEiJ_T0056408.1 MGP_WSBEiJ_G0025701.1 mouse_genomes_project 2 129472100 129476922 + Ap4e1 protein_coding retained_intron MGP_WSBEiJ_T0056409.1 MGP_WSBEiJ_G0025701.1 mouse_genomes_project 2 129472103 129507851 + MGP_WSBEiJ_P0056409 Ap4e1 protein_coding protein_coding MGP_WSBEiJ_T0056410.1 MGP_WSBEiJ_G0025701.1 mouse_genomes_project 2 129472109 129532975 + MGP_WSBEiJ_P0056410 Ap4e1 protein_coding protein_coding MGP_WSBEiJ_T0056411.1 MGP_WSBEiJ_G0025701.1 mouse_genomes_project 2 129472131 129491289 + MGP_WSBEiJ_P0056411 Ap4e1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056412.1 MGP_WSBEiJ_G0025701.1 mouse_genomes_project 2 129472133 129523433 + MGP_WSBEiJ_P0056412 Ap4e1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056413.1 MGP_WSBEiJ_G0025701.1 mouse_genomes_project 2 129472133 129510186 + MGP_WSBEiJ_P0056413 Ap4e1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056414.1 MGP_WSBEiJ_G0025701.1 mouse_genomes_project 2 129512366 129523262 + MGP_WSBEiJ_P0056414 Ap4e1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056534.1 MGP_WSBEiJ_G0025732.1 mouse_genomes_project 2 131483292 131503598 - MGP_WSBEiJ_P0056534 Zc3h8 protein_coding protein_coding MGP_WSBEiJ_T0013433.1 MGP_WSBEiJ_G0011563.1 mouse_genomes_project 2 150137381 150137984 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057111.1 MGP_WSBEiJ_G0025868.1 mouse_genomes_project 2 152095380 152099312 + MGP_WSBEiJ_P0057111 8030411F24Rik protein_coding protein_coding MGP_WSBEiJ_T0013432.1 MGP_WSBEiJ_G0011562.1 mouse_genomes_project 2 150137317 150138154 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051377.1 MGP_WSBEiJ_G0024588.1 mouse_genomes_project 2 2358012 2801676 - MGP_WSBEiJ_P0051377 Camk1d protein_coding protein_coding MGP_WSBEiJ_T0051378.1 MGP_WSBEiJ_G0024588.1 mouse_genomes_project 2 2363396 2766020 - MGP_WSBEiJ_P0051378 Camk1d protein_coding protein_coding MGP_WSBEiJ_T0051379.1 MGP_WSBEiJ_G0024588.1 mouse_genomes_project 2 2519982 2766374 - Camk1d protein_coding processed_transcript MGP_WSBEiJ_T0051380.1 MGP_WSBEiJ_G0024588.1 mouse_genomes_project 2 2638569 2801664 - Camk1d protein_coding processed_transcript MGP_WSBEiJ_T0051543.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9079960 9081039 - Fbxo18 protein_coding processed_transcript MGP_WSBEiJ_T0051544.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9079962 9114296 - MGP_WSBEiJ_P0051544 Fbxo18 protein_coding protein_coding MGP_WSBEiJ_T0051545.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9081054 9086389 - Fbxo18 protein_coding retained_intron MGP_WSBEiJ_T0051546.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9085009 9114221 - Fbxo18 protein_coding retained_intron MGP_WSBEiJ_T0051547.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9085596 9094296 - MGP_WSBEiJ_P0051547 Fbxo18 protein_coding protein_coding MGP_WSBEiJ_T0051548.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9086614 9088927 - Fbxo18 protein_coding retained_intron MGP_WSBEiJ_T0051549.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9088836 9095213 - Fbxo18 protein_coding retained_intron MGP_WSBEiJ_T0051550.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9099684 9114264 - Fbxo18 protein_coding processed_transcript MGP_WSBEiJ_T0051551.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9100977 9114262 - Fbxo18 protein_coding processed_transcript MGP_WSBEiJ_T0051552.1 MGP_WSBEiJ_G0024614.1 mouse_genomes_project 2 9104247 9114221 - Fbxo18 protein_coding processed_transcript MGP_WSBEiJ_T0013327.1 MGP_WSBEiJ_G0011457.1 mouse_genomes_project 2 103410980 103411458 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057901.1 MGP_WSBEiJ_G0026051.1 mouse_genomes_project 2 164273346 164275563 - MGP_WSBEiJ_P0057901 Gm826 protein_coding protein_coding MGP_WSBEiJ_T0057902.1 MGP_WSBEiJ_G0026051.1 mouse_genomes_project 2 164273697 164295972 - Gm826 protein_coding processed_transcript MGP_WSBEiJ_T0057903.1 MGP_WSBEiJ_G0026051.1 mouse_genomes_project 2 164273814 164289304 - MGP_WSBEiJ_P0057903 Gm826 protein_coding protein_coding MGP_WSBEiJ_T0013257.1 MGP_WSBEiJ_G0011387.1 mouse_genomes_project 2 78735915 78736554 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058742.1 MGP_WSBEiJ_G0026260.1 mouse_genomes_project 2 186396126 186405210 - MGP_WSBEiJ_P0058742 Ptk6 protein_coding protein_coding MGP_WSBEiJ_T0010232.1 MGP_WSBEiJ_G0008389.1 mouse_genomes_project 2 29800576 29800640 + Mir6998 miRNA miRNA MGP_WSBEiJ_T0056935.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426430 145504732 + MGP_WSBEiJ_P0056935 Macrod2 protein_coding protein_coding MGP_WSBEiJ_T0056936.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426477 143750421 + MGP_WSBEiJ_P0056936 Macrod2 protein_coding protein_coding MGP_WSBEiJ_T0056937.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426477 145504732 + MGP_WSBEiJ_P0056937 Macrod2 protein_coding protein_coding MGP_WSBEiJ_T0056938.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426551 143457865 + MGP_WSBEiJ_P0056938 Macrod2 protein_coding protein_coding MGP_WSBEiJ_T0056939.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426554 143868620 + Macrod2 protein_coding retained_intron MGP_WSBEiJ_T0056940.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426556 143457868 + MGP_WSBEiJ_P0056940 Macrod2 protein_coding protein_coding MGP_WSBEiJ_T0056941.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426556 145496170 + MGP_WSBEiJ_P0056941 Macrod2 protein_coding protein_coding MGP_WSBEiJ_T0056942.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426577 143687786 + Macrod2 protein_coding processed_transcript MGP_WSBEiJ_T0056943.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143426581 143455409 + Macrod2 protein_coding processed_transcript MGP_WSBEiJ_T0056944.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 143431653 143455409 + MGP_WSBEiJ_P0056944 Macrod2 protein_coding protein_coding MGP_WSBEiJ_T0056948.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 144086083 144211108 + Macrod2 protein_coding processed_transcript MGP_WSBEiJ_T0056949.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 144636048 145504732 + Macrod2 protein_coding processed_transcript MGP_WSBEiJ_T0056950.1 MGP_WSBEiJ_G0025824.1 mouse_genomes_project 2 145294029 145343655 + MGP_WSBEiJ_P0056950 Macrod2 protein_coding protein_coding MGP_WSBEiJ_T0013362.1 MGP_WSBEiJ_G0011492.1 mouse_genomes_project 2 113620613 113622345 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003853.1 MGP_WSBEiJ_G0003442.1 mouse_genomes_project 2 24492961 24504402 + antisense antisense MGP_WSBEiJ_T0003854.1 MGP_WSBEiJ_G0003442.1 mouse_genomes_project 2 24497757 24504402 + antisense antisense MGP_WSBEiJ_T0003855.1 MGP_WSBEiJ_G0003442.1 mouse_genomes_project 2 24499936 24504402 + antisense antisense MGP_WSBEiJ_T0001033.1 MGP_WSBEiJ_G0000968.1 mouse_genomes_project 2 33845554 33846554 - TEC TEC MGP_WSBEiJ_T0051721.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16255865 16259644 + MGP_WSBEiJ_P0051721 Commd3 protein_coding protein_coding MGP_WSBEiJ_T0051722.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16255904 16259645 + MGP_WSBEiJ_P0051722 Commd3 protein_coding protein_coding MGP_WSBEiJ_T0051723.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16255914 16258106 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051724.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16255916 16258049 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051725.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16255917 16257926 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051726.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16256004 16257814 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051727.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16257071 16257811 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051728.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16257374 16259342 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051729.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16257498 16259395 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051730.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16257760 16259337 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051731.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16257837 16258420 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0051732.1 MGP_WSBEiJ_G0024642.1 mouse_genomes_project 2 16258062 16258915 + Commd3 protein_coding processed_transcript MGP_WSBEiJ_T0003967.1 MGP_WSBEiJ_G0003525.1 mouse_genomes_project 2 106963689 107100496 - Pax6os1 antisense antisense MGP_WSBEiJ_T0003968.1 MGP_WSBEiJ_G0003525.1 mouse_genomes_project 2 106965775 107100446 - Pax6os1 antisense antisense MGP_WSBEiJ_T0007222.1 MGP_WSBEiJ_G0005923.1 mouse_genomes_project 2 135183639 135201639 - Gm14095 lincRNA lincRNA MGP_WSBEiJ_T0057101.1 MGP_WSBEiJ_G0025864.1 mouse_genomes_project 2 151994395 152006984 + MGP_WSBEiJ_P0057101 Gzf1 protein_coding protein_coding MGP_WSBEiJ_T0057102.1 MGP_WSBEiJ_G0025864.1 mouse_genomes_project 2 151994583 151997423 + MGP_WSBEiJ_P0057102 Gzf1 protein_coding protein_coding MGP_WSBEiJ_T0057103.1 MGP_WSBEiJ_G0025864.1 mouse_genomes_project 2 151997985 152004250 + Gzf1 protein_coding processed_transcript MGP_WSBEiJ_T0001066.1 MGP_WSBEiJ_G0001000.1 mouse_genomes_project 2 139560419 139560685 + TEC TEC MGP_WSBEiJ_T0013397.1 MGP_WSBEiJ_G0011527.1 mouse_genomes_project 2 134075730 134076055 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010204.1 MGP_WSBEiJ_G0008361.1 mouse_genomes_project 2 7830621 7830723 + Mir297a-3 miRNA miRNA MGP_WSBEiJ_T0007177.1 MGP_WSBEiJ_G0005887.1 mouse_genomes_project 2 106901091 106901948 + 4930527A07Rik lincRNA lincRNA MGP_WSBEiJ_T0013377.1 MGP_WSBEiJ_G0011507.1 mouse_genomes_project 2 123506092 123506325 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055809.1 MGP_WSBEiJ_G0025580.1 mouse_genomes_project 2 121031359 121036336 + MGP_WSBEiJ_P0055809 Rpusd2 protein_coding protein_coding MGP_WSBEiJ_T0010187.1 MGP_WSBEiJ_G0008344.1 mouse_genomes_project 2 7819778 7819876 + Mir297c miRNA miRNA MGP_WSBEiJ_T0007039.1 MGP_WSBEiJ_G0005779.1 mouse_genomes_project 2 14730492 14734237 - Gm13322 lincRNA lincRNA MGP_WSBEiJ_T0055384.1 MGP_WSBEiJ_G0025456.1 mouse_genomes_project 2 104705147 104746547 + MGP_WSBEiJ_P0055384 Elf5 protein_coding protein_coding MGP_WSBEiJ_T0055385.1 MGP_WSBEiJ_G0025456.1 mouse_genomes_project 2 104705172 104740865 + Elf5 protein_coding retained_intron MGP_WSBEiJ_T0055386.1 MGP_WSBEiJ_G0025456.1 mouse_genomes_project 2 104717524 104746550 + MGP_WSBEiJ_P0055386 Elf5 protein_coding protein_coding MGP_WSBEiJ_T0055387.1 MGP_WSBEiJ_G0025456.1 mouse_genomes_project 2 104717588 104745402 + MGP_WSBEiJ_P0055387 Elf5 protein_coding protein_coding MGP_WSBEiJ_T0055388.1 MGP_WSBEiJ_G0025456.1 mouse_genomes_project 2 104718290 104744610 + MGP_WSBEiJ_P0055388 Elf5 protein_coding protein_coding MGP_WSBEiJ_T0055389.1 MGP_WSBEiJ_G0025456.1 mouse_genomes_project 2 104742457 104744594 + Elf5 protein_coding processed_transcript MGP_WSBEiJ_T0055390.1 MGP_WSBEiJ_G0025456.1 mouse_genomes_project 2 104744316 104745384 + Elf5 protein_coding processed_transcript MGP_WSBEiJ_T0058126.1 MGP_WSBEiJ_G0026123.1 mouse_genomes_project 2 168973666 168977358 - Acot8 protein_coding retained_intron MGP_WSBEiJ_T0058127.1 MGP_WSBEiJ_G0026123.1 mouse_genomes_project 2 168973666 168985739 - MGP_WSBEiJ_P0058127 Acot8 protein_coding protein_coding MGP_WSBEiJ_T0058128.1 MGP_WSBEiJ_G0026123.1 mouse_genomes_project 2 168973666 168985739 - MGP_WSBEiJ_P0058128 Acot8 protein_coding protein_coding MGP_WSBEiJ_T0058129.1 MGP_WSBEiJ_G0026123.1 mouse_genomes_project 2 168976676 168985738 - MGP_WSBEiJ_P0058129 Acot8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058130.1 MGP_WSBEiJ_G0026123.1 mouse_genomes_project 2 168980417 168985679 - Acot8 protein_coding retained_intron MGP_WSBEiJ_T0013336.1 MGP_WSBEiJ_G0011466.1 mouse_genomes_project 2 105201219 105201480 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003900.1 MGP_WSBEiJ_G0003479.1 mouse_genomes_project 2 57412181 57424039 + Gm13544 antisense antisense MGP_WSBEiJ_T0003818.1 MGP_WSBEiJ_G0003415.1 mouse_genomes_project 2 3572887 3577134 - Gm13388 antisense antisense MGP_WSBEiJ_T0013505.1 MGP_WSBEiJ_G0011635.1 mouse_genomes_project 2 179388890 179389251 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003983.1 MGP_WSBEiJ_G0003535.1 mouse_genomes_project 2 120267639 120270884 + 1700054M17Rik antisense antisense MGP_WSBEiJ_T0100058.1 MGP_WSBEiJ_G0038676.1 mouse_genomes_project 2 51723636 51724021 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0057345.1 MGP_WSBEiJ_G0025941.1 mouse_genomes_project 2 156823272 156869116 + MGP_WSBEiJ_P0057345 Kif3b protein_coding protein_coding MGP_WSBEiJ_T0100684.1 MGP_WSBEiJ_G0039142.1 mouse_genomes_project 2 18709019 18809640 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0055303.1 MGP_WSBEiJ_G0025439.1 mouse_genomes_project 2 95335527 95361515 - MGP_WSBEiJ_P0055303 Api5 protein_coding protein_coding MGP_WSBEiJ_T0055304.1 MGP_WSBEiJ_G0025439.1 mouse_genomes_project 2 95341495 95361491 - Api5 protein_coding processed_transcript MGP_WSBEiJ_T0055305.1 MGP_WSBEiJ_G0025439.1 mouse_genomes_project 2 95345384 95361659 - Api5 protein_coding retained_intron MGP_WSBEiJ_T0055306.1 MGP_WSBEiJ_G0025439.1 mouse_genomes_project 2 95350115 95355534 - Api5 protein_coding processed_transcript MGP_WSBEiJ_T0053472.1 MGP_WSBEiJ_G0024956.1 mouse_genomes_project 2 35776124 35785461 - MGP_WSBEiJ_P0053472 Pdcl protein_coding protein_coding MGP_WSBEiJ_T0053473.1 MGP_WSBEiJ_G0024956.1 mouse_genomes_project 2 35776638 35785382 - MGP_WSBEiJ_P0053473 Pdcl protein_coding protein_coding MGP_WSBEiJ_T0053474.1 MGP_WSBEiJ_G0024956.1 mouse_genomes_project 2 35778169 35785318 - MGP_WSBEiJ_P0053474 Pdcl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053475.1 MGP_WSBEiJ_G0024956.1 mouse_genomes_project 2 35778208 35785325 - MGP_WSBEiJ_P0053475 Pdcl protein_coding protein_coding MGP_WSBEiJ_T0055243.1 MGP_WSBEiJ_G0025429.1 mouse_genomes_project 2 94455678 94459471 + MGP_WSBEiJ_P0055243 Gm10803 protein_coding protein_coding MGP_WSBEiJ_T0054809.1 MGP_WSBEiJ_G0025297.1 mouse_genomes_project 2 88685140 88686472 - MGP_WSBEiJ_P0054809 protein_coding protein_coding MGP_WSBEiJ_T0052120.1 MGP_WSBEiJ_G0024712.1 mouse_genomes_project 2 23191661 23211537 + MGP_WSBEiJ_P0052120 Abca2 protein_coding protein_coding MGP_WSBEiJ_T0052121.1 MGP_WSBEiJ_G0024712.1 mouse_genomes_project 2 23204300 23205908 + Abca2 protein_coding processed_transcript MGP_WSBEiJ_T0052122.1 MGP_WSBEiJ_G0024712.1 mouse_genomes_project 2 23205938 23206804 + Abca2 protein_coding processed_transcript MGP_WSBEiJ_T0052123.1 MGP_WSBEiJ_G0024712.1 mouse_genomes_project 2 23208152 23209862 + Abca2 protein_coding processed_transcript MGP_WSBEiJ_T0052124.1 MGP_WSBEiJ_G0024712.1 mouse_genomes_project 2 23208661 23210064 + Abca2 protein_coding processed_transcript MGP_WSBEiJ_T0052125.1 MGP_WSBEiJ_G0024712.1 mouse_genomes_project 2 23208818 23209539 + Abca2 protein_coding processed_transcript MGP_WSBEiJ_T0052126.1 MGP_WSBEiJ_G0024712.1 mouse_genomes_project 2 23208839 23209473 + Abca2 protein_coding processed_transcript MGP_WSBEiJ_T0054551.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84102160 84137084 + Itgav protein_coding retained_intron MGP_WSBEiJ_T0054552.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84102160 84191261 + MGP_WSBEiJ_P0054552 Itgav protein_coding protein_coding MGP_WSBEiJ_T0054553.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84102215 84127663 + MGP_WSBEiJ_P0054553 Itgav protein_coding protein_coding MGP_WSBEiJ_T0054554.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84102220 84119502 + Itgav protein_coding processed_transcript MGP_WSBEiJ_T0054555.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84102229 84128093 + Itgav protein_coding retained_intron MGP_WSBEiJ_T0054556.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84102290 84103569 + Itgav protein_coding processed_transcript MGP_WSBEiJ_T0054557.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84102318 84191261 + MGP_WSBEiJ_P0054557 Itgav protein_coding protein_coding MGP_WSBEiJ_T0054558.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84186184 84188327 + MGP_WSBEiJ_P0054558 Itgav protein_coding protein_coding MGP_WSBEiJ_T0054559.1 MGP_WSBEiJ_G0025155.1 mouse_genomes_project 2 84187258 84191261 + MGP_WSBEiJ_P0054559 Itgav protein_coding protein_coding MGP_WSBEiJ_T0099411.1 MGP_WSBEiJ_G0038074.1 mouse_genomes_project 2 173403785 173403914 - Gm25214 snoRNA snoRNA MGP_WSBEiJ_T0013083.1 MGP_WSBEiJ_G0011213.1 mouse_genomes_project 2 9803372 9803772 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058094.1 MGP_WSBEiJ_G0026108.1 mouse_genomes_project 2 168746763 168752013 - MGP_WSBEiJ_P0058094 Eppin protein_coding protein_coding MGP_WSBEiJ_T0054856.1 MGP_WSBEiJ_G0025339.1 mouse_genomes_project 2 90008805 90009741 - MGP_WSBEiJ_P0054856 Olfr1224-ps1 protein_coding protein_coding MGP_WSBEiJ_T0056152.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123456685 123459022 + MGP_WSBEiJ_P0056152 Ckmt1 protein_coding protein_coding MGP_WSBEiJ_T0056153.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123456747 123462736 + MGP_WSBEiJ_P0056153 Ckmt1 protein_coding protein_coding MGP_WSBEiJ_T0056154.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123456811 123458759 + MGP_WSBEiJ_P0056154 Ckmt1 protein_coding protein_coding MGP_WSBEiJ_T0056155.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123456878 123459990 + MGP_WSBEiJ_P0056155 Ckmt1 protein_coding protein_coding MGP_WSBEiJ_T0056156.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123457583 123462736 + MGP_WSBEiJ_P0056156 Ckmt1 protein_coding protein_coding MGP_WSBEiJ_T0056157.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123457629 123459987 + MGP_WSBEiJ_P0056157 Ckmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056158.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123457632 123459343 + Ckmt1 protein_coding retained_intron MGP_WSBEiJ_T0056159.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123457639 123459629 + MGP_WSBEiJ_P0056159 Ckmt1 protein_coding protein_coding MGP_WSBEiJ_T0056160.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123457817 123459001 + MGP_WSBEiJ_P0056160 Ckmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056161.1 MGP_WSBEiJ_G0025639.1 mouse_genomes_project 2 123461920 123462735 + Ckmt1 protein_coding retained_intron MGP_WSBEiJ_T0051948.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22701373 22785971 + MGP_WSBEiJ_P0051948 Pnpla7 protein_coding protein_coding MGP_WSBEiJ_T0051949.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22701413 22785971 + MGP_WSBEiJ_P0051949 Pnpla7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051950.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22701428 22707142 + MGP_WSBEiJ_P0051950 Pnpla7 protein_coding protein_coding MGP_WSBEiJ_T0051951.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22701429 22723377 + MGP_WSBEiJ_P0051951 Pnpla7 protein_coding protein_coding MGP_WSBEiJ_T0051952.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22701441 22705209 + Pnpla7 protein_coding processed_transcript MGP_WSBEiJ_T0051953.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22701488 22771340 + Pnpla7 protein_coding retained_intron MGP_WSBEiJ_T0051954.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22705212 22785981 + MGP_WSBEiJ_P0051954 Pnpla7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051955.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22707222 22714096 + Pnpla7 protein_coding processed_transcript MGP_WSBEiJ_T0051956.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22723731 22726712 + Pnpla7 protein_coding retained_intron MGP_WSBEiJ_T0051957.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22724185 22742234 + MGP_WSBEiJ_P0051957 Pnpla7 protein_coding protein_coding MGP_WSBEiJ_T0051958.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22771498 22785971 + Pnpla7 protein_coding retained_intron MGP_WSBEiJ_T0051959.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22783265 22784004 + Pnpla7 protein_coding retained_intron MGP_WSBEiJ_T0051960.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22783579 22785682 + MGP_WSBEiJ_P0051960 Pnpla7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051961.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22783634 22784250 + Pnpla7 protein_coding retained_intron MGP_WSBEiJ_T0051962.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22783821 22784765 + Pnpla7 protein_coding retained_intron MGP_WSBEiJ_T0051963.1 MGP_WSBEiJ_G0024683.1 mouse_genomes_project 2 22785067 22785769 + Pnpla7 protein_coding retained_intron MGP_WSBEiJ_T0017327.1 MGP_WSBEiJ_G0014915.1 mouse_genomes_project 2 176718076 176724000 - 1700028P15Rik processed_transcript lincRNA MGP_WSBEiJ_T0017328.1 MGP_WSBEiJ_G0014915.1 mouse_genomes_project 2 176719385 176723333 - 1700028P15Rik processed_transcript lincRNA MGP_WSBEiJ_T0017329.1 MGP_WSBEiJ_G0014915.1 mouse_genomes_project 2 176719386 176724025 - 1700028P15Rik processed_transcript retained_intron MGP_WSBEiJ_T0013185.1 MGP_WSBEiJ_G0011315.1 mouse_genomes_project 2 50120518 50121342 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058231.1 MGP_WSBEiJ_G0026141.1 mouse_genomes_project 2 169604592 169618557 - MGP_WSBEiJ_P0058231 Zfp334 protein_coding protein_coding MGP_WSBEiJ_T0054813.1 MGP_WSBEiJ_G0025301.1 mouse_genomes_project 2 88730583 88731528 - MGP_WSBEiJ_P0054813 Olfr1162 protein_coding protein_coding MGP_WSBEiJ_T0054814.1 MGP_WSBEiJ_G0025301.1 mouse_genomes_project 2 88730583 88732018 - MGP_WSBEiJ_P0054814 Olfr1162 protein_coding protein_coding MGP_WSBEiJ_T0054735.1 MGP_WSBEiJ_G0025235.1 mouse_genomes_project 2 87032544 87033512 - MGP_WSBEiJ_P0054735 protein_coding protein_coding MGP_WSBEiJ_T0052146.1 MGP_WSBEiJ_G0024715.1 mouse_genomes_project 2 23230640 23233969 - MGP_WSBEiJ_P0052146 Ptgds protein_coding protein_coding MGP_WSBEiJ_T0052147.1 MGP_WSBEiJ_G0024715.1 mouse_genomes_project 2 23230640 23233765 - MGP_WSBEiJ_P0052147 Ptgds protein_coding protein_coding MGP_WSBEiJ_T0052148.1 MGP_WSBEiJ_G0024715.1 mouse_genomes_project 2 23230640 23233672 - MGP_WSBEiJ_P0052148 Ptgds protein_coding protein_coding MGP_WSBEiJ_T0052149.1 MGP_WSBEiJ_G0024715.1 mouse_genomes_project 2 23230642 23233306 - Ptgds protein_coding retained_intron MGP_WSBEiJ_T0052150.1 MGP_WSBEiJ_G0024715.1 mouse_genomes_project 2 23230643 23233080 - Ptgds protein_coding processed_transcript MGP_WSBEiJ_T0007245.1 MGP_WSBEiJ_G0005942.1 mouse_genomes_project 2 151785510 151796815 + Gm14120 lincRNA lincRNA MGP_WSBEiJ_T0056345.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128293505 128294684 + Galk2 protein_coding processed_transcript MGP_WSBEiJ_T0056346.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128293530 128413406 + MGP_WSBEiJ_P0056346 Galk2 protein_coding protein_coding MGP_WSBEiJ_T0056347.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128293544 128325364 + MGP_WSBEiJ_P0056347 Galk2 protein_coding protein_coding MGP_WSBEiJ_T0056348.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128300483 128361791 + MGP_WSBEiJ_P0056348 Galk2 protein_coding protein_coding MGP_WSBEiJ_T0056349.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128300483 128412694 + MGP_WSBEiJ_P0056349 Galk2 protein_coding protein_coding MGP_WSBEiJ_T0056350.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128300619 128343719 + Galk2 protein_coding processed_transcript MGP_WSBEiJ_T0056351.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128300626 128328588 + MGP_WSBEiJ_P0056351 Galk2 protein_coding protein_coding MGP_WSBEiJ_T0056352.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128300630 128361847 + MGP_WSBEiJ_P0056352 Galk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056353.1 MGP_WSBEiJ_G0025689.1 mouse_genomes_project 2 128300644 128382070 + Galk2 protein_coding retained_intron MGP_WSBEiJ_T0056221.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124145171 124208252 + MGP_WSBEiJ_P0056221 Ctdspl2 protein_coding protein_coding MGP_WSBEiJ_T0056222.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124145585 124206999 + MGP_WSBEiJ_P0056222 Ctdspl2 protein_coding protein_coding MGP_WSBEiJ_T0056223.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124145634 124187639 + Ctdspl2 protein_coding retained_intron MGP_WSBEiJ_T0056224.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124145654 124207223 + Ctdspl2 protein_coding processed_transcript MGP_WSBEiJ_T0056225.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124145660 124187236 + Ctdspl2 protein_coding processed_transcript MGP_WSBEiJ_T0056226.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124145660 124183882 + Ctdspl2 protein_coding retained_intron MGP_WSBEiJ_T0056227.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124145833 124205338 + MGP_WSBEiJ_P0056227 Ctdspl2 protein_coding protein_coding MGP_WSBEiJ_T0056228.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124158914 124208199 + MGP_WSBEiJ_P0056228 Ctdspl2 protein_coding protein_coding MGP_WSBEiJ_T0056229.1 MGP_WSBEiJ_G0025654.1 mouse_genomes_project 2 124170216 124198719 + Ctdspl2 protein_coding retained_intron MGP_WSBEiJ_T0001020.1 MGP_WSBEiJ_G0000955.1 mouse_genomes_project 2 12436877 12438810 + TEC TEC MGP_WSBEiJ_T0013330.1 MGP_WSBEiJ_G0011460.1 mouse_genomes_project 2 104518079 104518499 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097320.1 MGP_WSBEiJ_G0035995.1 mouse_genomes_project 2 138519009 138519982 + Gm14209 sense_intronic sense_intronic MGP_WSBEiJ_T0055360.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104076024 104169617 - MGP_WSBEiJ_P0055360 Cd44 protein_coding protein_coding MGP_WSBEiJ_T0055361.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104076024 104169657 - MGP_WSBEiJ_P0055361 Cd44 protein_coding protein_coding MGP_WSBEiJ_T0055362.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104077413 104169487 - MGP_WSBEiJ_P0055362 Cd44 protein_coding protein_coding MGP_WSBEiJ_T0055363.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104077430 104169502 - MGP_WSBEiJ_P0055363 Cd44 protein_coding protein_coding MGP_WSBEiJ_T0055364.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104079003 104169361 - MGP_WSBEiJ_P0055364 Cd44 protein_coding protein_coding MGP_WSBEiJ_T0055365.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104079003 104169342 - MGP_WSBEiJ_P0055365 Cd44 protein_coding protein_coding MGP_WSBEiJ_T0055366.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104079013 104169342 - MGP_WSBEiJ_P0055366 Cd44 protein_coding protein_coding MGP_WSBEiJ_T0055367.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104079016 104169338 - MGP_WSBEiJ_P0055367 Cd44 protein_coding protein_coding MGP_WSBEiJ_T0055368.1 MGP_WSBEiJ_G0025452.1 mouse_genomes_project 2 104118176 104169450 - Cd44 protein_coding retained_intron MGP_WSBEiJ_T0013415.1 MGP_WSBEiJ_G0011545.1 mouse_genomes_project 2 144190108 144190893 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055544.1 MGP_WSBEiJ_G0025488.1 mouse_genomes_project 2 108532999 108536490 - MGP_WSBEiJ_P0055544 Fshb protein_coding protein_coding MGP_WSBEiJ_T0054046.1 MGP_WSBEiJ_G0025051.1 mouse_genomes_project 2 66939612 66939968 - MGP_WSBEiJ_P0054046 Gm26727 protein_coding protein_coding MGP_WSBEiJ_T0051825.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573096 20673584 - MGP_WSBEiJ_P0051825 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051826.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573096 20673538 - MGP_WSBEiJ_P0051826 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051827.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573109 20673584 - MGP_WSBEiJ_P0051827 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051828.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573331 20673465 - MGP_WSBEiJ_P0051828 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051829.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573387 20673530 - MGP_WSBEiJ_P0051829 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051830.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573387 20673447 - MGP_WSBEiJ_P0051830 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051831.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573387 20673480 - MGP_WSBEiJ_P0051831 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051832.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573392 20673528 - MGP_WSBEiJ_P0051832 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051833.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573392 20673573 - MGP_WSBEiJ_P0051833 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051834.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20573915 20673483 - MGP_WSBEiJ_P0051834 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051835.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20574256 20673562 - MGP_WSBEiJ_P0051835 Abi1 protein_coding protein_coding MGP_WSBEiJ_T0051836.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20574831 20579955 - Abi1 protein_coding retained_intron MGP_WSBEiJ_T0051837.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20574835 20583000 - Abi1 protein_coding retained_intron MGP_WSBEiJ_T0051838.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20579427 20594397 - Abi1 protein_coding retained_intron MGP_WSBEiJ_T0051839.1 MGP_WSBEiJ_G0024661.1 mouse_genomes_project 2 20582923 20596136 - Abi1 protein_coding retained_intron MGP_WSBEiJ_T0057386.1 MGP_WSBEiJ_G0025954.1 mouse_genomes_project 2 157609143 157616948 + MGP_WSBEiJ_P0057386 Bpifa2 protein_coding protein_coding MGP_WSBEiJ_T0057387.1 MGP_WSBEiJ_G0025954.1 mouse_genomes_project 2 157609154 157615313 + MGP_WSBEiJ_P0057387 Bpifa2 protein_coding protein_coding MGP_WSBEiJ_T0057388.1 MGP_WSBEiJ_G0025954.1 mouse_genomes_project 2 157614582 157616479 + Bpifa2 protein_coding retained_intron MGP_WSBEiJ_T0057389.1 MGP_WSBEiJ_G0025954.1 mouse_genomes_project 2 157615464 157616945 + Bpifa2 protein_coding retained_intron MGP_WSBEiJ_T0013458.1 MGP_WSBEiJ_G0011588.1 mouse_genomes_project 2 158554653 158574818 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055487.1 MGP_WSBEiJ_G0025478.1 mouse_genomes_project 2 106489723 106492922 + MGP_WSBEiJ_P0055487 Gm11060 protein_coding protein_coding MGP_WSBEiJ_T0054754.1 MGP_WSBEiJ_G0025252.1 mouse_genomes_project 2 87571456 87572422 - MGP_WSBEiJ_P0054754 Olfr1100 protein_coding protein_coding MGP_WSBEiJ_T0056784.1 MGP_WSBEiJ_G0025789.1 mouse_genomes_project 2 134601472 134639589 + MGP_WSBEiJ_P0056784 protein_coding protein_coding MGP_WSBEiJ_T0056785.1 MGP_WSBEiJ_G0025789.1 mouse_genomes_project 2 134601472 134639589 + MGP_WSBEiJ_P0056785 protein_coding protein_coding MGP_WSBEiJ_T0013197.1 MGP_WSBEiJ_G0011327.1 mouse_genomes_project 2 54825225 54826487 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053550.1 MGP_WSBEiJ_G0024970.1 mouse_genomes_project 2 37424645 37458635 + MGP_WSBEiJ_P0053550 Olfml2a protein_coding protein_coding MGP_WSBEiJ_T0055865.1 MGP_WSBEiJ_G0025596.1 mouse_genomes_project 2 121575982 121618593 + MGP_WSBEiJ_P0055865 Chp1 protein_coding protein_coding MGP_WSBEiJ_T0055866.1 MGP_WSBEiJ_G0025596.1 mouse_genomes_project 2 121575985 121618595 + MGP_WSBEiJ_P0055866 Chp1 protein_coding protein_coding MGP_WSBEiJ_T0055867.1 MGP_WSBEiJ_G0025596.1 mouse_genomes_project 2 121576009 121618583 + MGP_WSBEiJ_P0055867 Chp1 protein_coding protein_coding MGP_WSBEiJ_T0055868.1 MGP_WSBEiJ_G0025596.1 mouse_genomes_project 2 121576100 121600805 + Chp1 protein_coding retained_intron MGP_WSBEiJ_T0055869.1 MGP_WSBEiJ_G0025596.1 mouse_genomes_project 2 121595614 121617082 + Chp1 protein_coding retained_intron MGP_WSBEiJ_T0057986.1 MGP_WSBEiJ_G0026069.1 mouse_genomes_project 2 167481894 167501385 - MGP_WSBEiJ_P0057986 protein_coding protein_coding MGP_WSBEiJ_T0057987.1 MGP_WSBEiJ_G0026069.1 mouse_genomes_project 2 167499562 167501238 - protein_coding processed_transcript MGP_WSBEiJ_T0053018.1 MGP_WSBEiJ_G0024864.1 mouse_genomes_project 2 30498359 30501733 - MGP_WSBEiJ_P0053018 Uck1 protein_coding protein_coding MGP_WSBEiJ_T0053019.1 MGP_WSBEiJ_G0024864.1 mouse_genomes_project 2 30499937 30501722 - Uck1 protein_coding retained_intron MGP_WSBEiJ_T0053020.1 MGP_WSBEiJ_G0024864.1 mouse_genomes_project 2 30500187 30502150 - Uck1 protein_coding retained_intron MGP_WSBEiJ_T0098132.1 MGP_WSBEiJ_G0036795.1 mouse_genomes_project 2 151156475 151156582 - Gm25516 snRNA snRNA MGP_WSBEiJ_T0007270.1 MGP_WSBEiJ_G0005964.1 mouse_genomes_project 2 166706791 166707866 + Gm14246 lincRNA lincRNA MGP_WSBEiJ_T0052633.1 MGP_WSBEiJ_G0024810.1 mouse_genomes_project 2 27819082 27833725 + MGP_WSBEiJ_P0052633 Slc27a4 protein_coding protein_coding MGP_WSBEiJ_T0052634.1 MGP_WSBEiJ_G0024810.1 mouse_genomes_project 2 27823446 27827103 + Slc27a4 protein_coding processed_transcript MGP_WSBEiJ_T0053704.1 MGP_WSBEiJ_G0024992.1 mouse_genomes_project 2 50543519 50544417 + MGP_WSBEiJ_P0053704 Tas2r134 protein_coding protein_coding MGP_WSBEiJ_T0007210.1 MGP_WSBEiJ_G0005913.1 mouse_genomes_project 2 126505294 126511314 - 4930517E11Rik lincRNA lincRNA MGP_WSBEiJ_T0010215.1 MGP_WSBEiJ_G0008372.1 mouse_genomes_project 2 20288498 20288601 + Gm23636 miRNA miRNA MGP_WSBEiJ_T0004086.1 MGP_WSBEiJ_G0003613.1 mouse_genomes_project 2 170146544 170148559 + Gm11465 antisense antisense MGP_WSBEiJ_T0003835.1 MGP_WSBEiJ_G0003430.1 mouse_genomes_project 2 18068731 18069856 - antisense antisense MGP_WSBEiJ_T0003920.1 MGP_WSBEiJ_G0003496.1 mouse_genomes_project 2 70166702 70244619 - Gad1os antisense antisense MGP_WSBEiJ_T0003921.1 MGP_WSBEiJ_G0003496.1 mouse_genomes_project 2 70167006 70168231 - Gad1os antisense antisense MGP_WSBEiJ_T0013093.1 MGP_WSBEiJ_G0011223.1 mouse_genomes_project 2 13486717 13487330 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003986.1 MGP_WSBEiJ_G0003538.1 mouse_genomes_project 2 120992308 120995906 + Gm14089 antisense antisense MGP_WSBEiJ_T0057979.1 MGP_WSBEiJ_G0026067.1 mouse_genomes_project 2 167272362 167398873 + MGP_WSBEiJ_P0057979 Tox2 protein_coding protein_coding MGP_WSBEiJ_T0057980.1 MGP_WSBEiJ_G0026067.1 mouse_genomes_project 2 167273790 167347079 + MGP_WSBEiJ_P0057980 Tox2 protein_coding protein_coding MGP_WSBEiJ_T0057981.1 MGP_WSBEiJ_G0026067.1 mouse_genomes_project 2 167296335 167398005 + MGP_WSBEiJ_P0057981 Tox2 protein_coding protein_coding MGP_WSBEiJ_T0057982.1 MGP_WSBEiJ_G0026067.1 mouse_genomes_project 2 167296426 167397805 + MGP_WSBEiJ_P0057982 Tox2 protein_coding protein_coding MGP_WSBEiJ_T0057983.1 MGP_WSBEiJ_G0026067.1 mouse_genomes_project 2 167395080 167397805 + MGP_WSBEiJ_P0057983 Tox2 protein_coding protein_coding MGP_WSBEiJ_T0053787.1 MGP_WSBEiJ_G0025011.1 mouse_genomes_project 2 57265307 57297085 - MGP_WSBEiJ_P0053787 Cytip protein_coding protein_coding MGP_WSBEiJ_T0053788.1 MGP_WSBEiJ_G0025011.1 mouse_genomes_project 2 57269961 57336591 - Cytip protein_coding processed_transcript MGP_WSBEiJ_T0053789.1 MGP_WSBEiJ_G0025011.1 mouse_genomes_project 2 57270046 57336601 - Cytip protein_coding processed_transcript MGP_WSBEiJ_T0053790.1 MGP_WSBEiJ_G0025011.1 mouse_genomes_project 2 57270178 57293373 - Cytip protein_coding processed_transcript MGP_WSBEiJ_T0053791.1 MGP_WSBEiJ_G0025011.1 mouse_genomes_project 2 57283646 57296711 - Cytip protein_coding processed_transcript MGP_WSBEiJ_T0053792.1 MGP_WSBEiJ_G0025011.1 mouse_genomes_project 2 57283821 57336602 - Cytip protein_coding processed_transcript MGP_WSBEiJ_T0053793.1 MGP_WSBEiJ_G0025011.1 mouse_genomes_project 2 57296567 57336606 - Cytip protein_coding processed_transcript MGP_WSBEiJ_T0053794.1 MGP_WSBEiJ_G0025011.1 mouse_genomes_project 2 57296628 57297247 - Cytip protein_coding processed_transcript MGP_WSBEiJ_T0052160.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23264698 23269425 + MGP_WSBEiJ_P0052160 Fbxw5 protein_coding protein_coding MGP_WSBEiJ_T0052161.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23264767 23267502 + Fbxw5 protein_coding processed_transcript MGP_WSBEiJ_T0052162.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23264769 23267765 + Fbxw5 protein_coding processed_transcript MGP_WSBEiJ_T0052163.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23264810 23267138 + Fbxw5 protein_coding processed_transcript MGP_WSBEiJ_T0052164.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23264830 23267556 + Fbxw5 protein_coding processed_transcript MGP_WSBEiJ_T0052165.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23266509 23267536 + Fbxw5 protein_coding processed_transcript MGP_WSBEiJ_T0052166.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23266989 23267752 + Fbxw5 protein_coding processed_transcript MGP_WSBEiJ_T0052167.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23267177 23268786 + MGP_WSBEiJ_P0052167 Fbxw5 protein_coding protein_coding MGP_WSBEiJ_T0052168.1 MGP_WSBEiJ_G0024718.1 mouse_genomes_project 2 23267858 23268897 + Fbxw5 protein_coding processed_transcript MGP_WSBEiJ_T0056960.1 MGP_WSBEiJ_G0025829.1 mouse_genomes_project 2 146693418 146966483 + MGP_WSBEiJ_P0056960 Pcsk2 protein_coding protein_coding MGP_WSBEiJ_T0056961.1 MGP_WSBEiJ_G0025829.1 mouse_genomes_project 2 146693533 146726321 + Pcsk2 protein_coding processed_transcript MGP_WSBEiJ_T0053351.1 MGP_WSBEiJ_G0024913.1 mouse_genomes_project 2 33481135 33500279 - MGP_WSBEiJ_P0053351 AI182371 protein_coding unknown_likely_coding MGP_WSBEiJ_T0053352.1 MGP_WSBEiJ_G0024913.1 mouse_genomes_project 2 33482694 33500311 - MGP_WSBEiJ_P0053352 AI182371 protein_coding protein_coding MGP_WSBEiJ_T0053353.1 MGP_WSBEiJ_G0024913.1 mouse_genomes_project 2 33485693 33500310 - MGP_WSBEiJ_P0053353 AI182371 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053354.1 MGP_WSBEiJ_G0024913.1 mouse_genomes_project 2 33486034 33494436 - AI182371 protein_coding processed_transcript MGP_WSBEiJ_T0053355.1 MGP_WSBEiJ_G0024913.1 mouse_genomes_project 2 33488799 33501169 - AI182371 protein_coding processed_transcript MGP_WSBEiJ_T0010183.1 MGP_WSBEiJ_G0008340.1 mouse_genomes_project 2 7816495 7816575 + miRNA miRNA MGP_WSBEiJ_T0017206.1 MGP_WSBEiJ_G0014858.1 mouse_genomes_project 2 88714961 88718625 - processed_transcript processed_transcript MGP_WSBEiJ_T0054103.1 MGP_WSBEiJ_G0025065.1 mouse_genomes_project 2 69286883 69301027 + MGP_WSBEiJ_P0054103 Klhl41 protein_coding protein_coding MGP_WSBEiJ_T0013146.1 MGP_WSBEiJ_G0011276.1 mouse_genomes_project 2 35479019 35479428 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054075.1 MGP_WSBEiJ_G0025058.1 mouse_genomes_project 2 68702804 68762451 + MGP_WSBEiJ_P0054075 Nostrin protein_coding protein_coding MGP_WSBEiJ_T0054076.1 MGP_WSBEiJ_G0025058.1 mouse_genomes_project 2 68750337 68758677 + Nostrin protein_coding processed_transcript MGP_WSBEiJ_T0051381.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2888158 2946680 - MGP_WSBEiJ_P0051381 Cdc123 protein_coding protein_coding MGP_WSBEiJ_T0051382.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2888529 2892463 - Cdc123 protein_coding processed_transcript MGP_WSBEiJ_T0051383.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2892225 2898237 - Cdc123 protein_coding retained_intron MGP_WSBEiJ_T0051384.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2898694 2910319 - Cdc123 protein_coding processed_transcript MGP_WSBEiJ_T0051385.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2898813 2934658 - Cdc123 protein_coding retained_intron MGP_WSBEiJ_T0051386.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2909051 2935153 - MGP_WSBEiJ_P0051386 Cdc123 protein_coding protein_coding MGP_WSBEiJ_T0051387.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2910214 2946457 - Cdc123 protein_coding retained_intron MGP_WSBEiJ_T0051388.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2918079 2920074 - Cdc123 protein_coding retained_intron MGP_WSBEiJ_T0051389.1 MGP_WSBEiJ_G0024589.1 mouse_genomes_project 2 2919770 2946367 - Cdc123 protein_coding processed_transcript MGP_WSBEiJ_T0007022.1 MGP_WSBEiJ_G0005765.1 mouse_genomes_project 2 3392197 3393518 - Gm13383 lincRNA lincRNA MGP_WSBEiJ_T0051419.1 MGP_WSBEiJ_G0024596.1 mouse_genomes_project 2 3319882 3343712 - MGP_WSBEiJ_P0051419 Echdc3 protein_coding protein_coding MGP_WSBEiJ_T0051420.1 MGP_WSBEiJ_G0024596.1 mouse_genomes_project 2 3320926 3327619 - Echdc3 protein_coding processed_transcript MGP_WSBEiJ_T0051421.1 MGP_WSBEiJ_G0024596.1 mouse_genomes_project 2 3336645 3343658 - Echdc3 protein_coding retained_intron MGP_WSBEiJ_T0010192.1 MGP_WSBEiJ_G0008349.1 mouse_genomes_project 2 7823770 7823873 + Gm22239 miRNA miRNA MGP_WSBEiJ_T0053583.1 MGP_WSBEiJ_G0024976.1 mouse_genomes_project 2 37703522 37737526 - MGP_WSBEiJ_P0053583 Ppp6c protein_coding protein_coding MGP_WSBEiJ_T0053584.1 MGP_WSBEiJ_G0024976.1 mouse_genomes_project 2 37705896 37737567 - MGP_WSBEiJ_P0053584 Ppp6c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053585.1 MGP_WSBEiJ_G0024976.1 mouse_genomes_project 2 37705939 37737605 - MGP_WSBEiJ_P0053585 Ppp6c protein_coding protein_coding MGP_WSBEiJ_T0053586.1 MGP_WSBEiJ_G0024976.1 mouse_genomes_project 2 37706659 37710153 - Ppp6c protein_coding processed_transcript MGP_WSBEiJ_T0001026.1 MGP_WSBEiJ_G0000961.1 mouse_genomes_project 2 21904235 21906013 + TEC TEC MGP_WSBEiJ_T0017296.1 MGP_WSBEiJ_G0014901.1 mouse_genomes_project 2 156876870 156881450 - 2500004C02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017297.1 MGP_WSBEiJ_G0014901.1 mouse_genomes_project 2 156878162 156878868 - 2500004C02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0054088.1 MGP_WSBEiJ_G0025061.1 mouse_genomes_project 2 68820340 68936690 - MGP_WSBEiJ_P0054088 Abcb11 protein_coding protein_coding MGP_WSBEiJ_T0054089.1 MGP_WSBEiJ_G0025061.1 mouse_genomes_project 2 68820347 68936692 - MGP_WSBEiJ_P0054089 Abcb11 protein_coding protein_coding MGP_WSBEiJ_T0054090.1 MGP_WSBEiJ_G0025061.1 mouse_genomes_project 2 68820347 68936676 - MGP_WSBEiJ_P0054090 Abcb11 protein_coding protein_coding MGP_WSBEiJ_T0054091.1 MGP_WSBEiJ_G0025061.1 mouse_genomes_project 2 68820368 68821137 - Abcb11 protein_coding processed_transcript MGP_WSBEiJ_T0057405.1 MGP_WSBEiJ_G0025962.1 mouse_genomes_project 2 157964716 158001231 - MGP_WSBEiJ_P0057405 Cdk5rap1 protein_coding protein_coding MGP_WSBEiJ_T0057406.1 MGP_WSBEiJ_G0025962.1 mouse_genomes_project 2 157964722 158000908 - MGP_WSBEiJ_P0057406 Cdk5rap1 protein_coding protein_coding MGP_WSBEiJ_T0057407.1 MGP_WSBEiJ_G0025962.1 mouse_genomes_project 2 157972597 158000950 - Cdk5rap1 protein_coding processed_transcript MGP_WSBEiJ_T0057408.1 MGP_WSBEiJ_G0025962.1 mouse_genomes_project 2 157983570 157987306 - Cdk5rap1 protein_coding retained_intron MGP_WSBEiJ_T0057409.1 MGP_WSBEiJ_G0025962.1 mouse_genomes_project 2 157988960 158000920 - MGP_WSBEiJ_P0057409 Cdk5rap1 protein_coding protein_coding MGP_WSBEiJ_T0057410.1 MGP_WSBEiJ_G0025962.1 mouse_genomes_project 2 157994026 157998975 - Cdk5rap1 protein_coding processed_transcript MGP_WSBEiJ_T0057411.1 MGP_WSBEiJ_G0025962.1 mouse_genomes_project 2 157998867 158000880 - Cdk5rap1 protein_coding processed_transcript MGP_WSBEiJ_T0054695.1 MGP_WSBEiJ_G0025196.1 mouse_genomes_project 2 86198349 86199294 + MGP_WSBEiJ_P0054695 Olfr1009 protein_coding protein_coding MGP_WSBEiJ_T0011313.1 MGP_WSBEiJ_G0009470.1 mouse_genomes_project 2 129963442 129963734 - Gm22613 misc_RNA misc_RNA MGP_WSBEiJ_T0053111.1 MGP_WSBEiJ_G0024876.1 mouse_genomes_project 2 30841568 30843069 - MGP_WSBEiJ_P0053111 9430097D07Rik protein_coding protein_coding MGP_WSBEiJ_T0055325.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 102933091 103066628 - MGP_WSBEiJ_P0055325 Prr5l protein_coding protein_coding MGP_WSBEiJ_T0055326.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 102933091 103021031 - MGP_WSBEiJ_P0055326 Prr5l protein_coding protein_coding MGP_WSBEiJ_T0055327.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 102935046 103021032 - MGP_WSBEiJ_P0055327 Prr5l protein_coding protein_coding MGP_WSBEiJ_T0055328.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 102963044 103066628 - MGP_WSBEiJ_P0055328 Prr5l protein_coding protein_coding MGP_WSBEiJ_T0055329.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 102981223 103111427 - MGP_WSBEiJ_P0055329 Prr5l protein_coding protein_coding MGP_WSBEiJ_T0055330.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 102994848 103021378 - MGP_WSBEiJ_P0055330 Prr5l protein_coding protein_coding MGP_WSBEiJ_T0055331.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 102994892 103040530 - MGP_WSBEiJ_P0055331 Prr5l protein_coding protein_coding MGP_WSBEiJ_T0055332.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 102995003 103021057 - Prr5l protein_coding processed_transcript MGP_WSBEiJ_T0055333.1 MGP_WSBEiJ_G0025445.1 mouse_genomes_project 2 103058729 103111440 - Prr5l protein_coding processed_transcript MGP_WSBEiJ_T0100720.1 MGP_WSBEiJ_G0039178.1 mouse_genomes_project 2 88495852 88496165 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0055009.1 MGP_WSBEiJ_G0025395.1 mouse_genomes_project 2 91840384 91859856 + MGP_WSBEiJ_P0055009 Mybpc3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055010.1 MGP_WSBEiJ_G0025395.1 mouse_genomes_project 2 91840578 91859855 + MGP_WSBEiJ_P0055010 Mybpc3 protein_coding protein_coding MGP_WSBEiJ_T0055011.1 MGP_WSBEiJ_G0025395.1 mouse_genomes_project 2 91840578 91859849 + MGP_WSBEiJ_P0055011 Mybpc3 protein_coding protein_coding MGP_WSBEiJ_T0055012.1 MGP_WSBEiJ_G0025395.1 mouse_genomes_project 2 91840578 91859849 + MGP_WSBEiJ_P0055012 Mybpc3 protein_coding protein_coding MGP_WSBEiJ_T0000998.1 MGP_WSBEiJ_G0000933.1 mouse_genomes_project 2 8659697 8660586 + TEC TEC MGP_WSBEiJ_T0055975.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122478814 122500135 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055976.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479119 122496033 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055977.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479120 122533857 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055978.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479128 122500897 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055979.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479142 122538492 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055980.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479232 122496031 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055981.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479256 122492199 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055982.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479686 122539351 + MGP_WSBEiJ_P0055982 Ganc protein_coding protein_coding MGP_WSBEiJ_T0055983.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479692 122490902 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055984.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122479898 122538516 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055985.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122481044 122537865 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055986.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122488161 122513586 + Ganc protein_coding retained_intron MGP_WSBEiJ_T0055987.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122499976 122507837 + Ganc protein_coding processed_transcript MGP_WSBEiJ_T0055988.1 MGP_WSBEiJ_G0025617.1 mouse_genomes_project 2 122529169 122537987 + Ganc protein_coding retained_intron MGP_WSBEiJ_T0054522.1 MGP_WSBEiJ_G0025148.1 mouse_genomes_project 2 80801174 80897961 - MGP_WSBEiJ_P0054522 Nckap1 protein_coding protein_coding MGP_WSBEiJ_T0054523.1 MGP_WSBEiJ_G0025148.1 mouse_genomes_project 2 80801180 80898077 - MGP_WSBEiJ_P0054523 Nckap1 protein_coding protein_coding MGP_WSBEiJ_T0054524.1 MGP_WSBEiJ_G0025148.1 mouse_genomes_project 2 80821014 80839604 - Nckap1 protein_coding processed_transcript MGP_WSBEiJ_T0054525.1 MGP_WSBEiJ_G0025148.1 mouse_genomes_project 2 80861134 80871083 - Nckap1 protein_coding processed_transcript MGP_WSBEiJ_T0054526.1 MGP_WSBEiJ_G0025148.1 mouse_genomes_project 2 80864950 80870803 - Nckap1 protein_coding processed_transcript MGP_WSBEiJ_T0010320.1 MGP_WSBEiJ_G0008477.1 mouse_genomes_project 2 179204819 179204901 - Mir298 miRNA miRNA MGP_WSBEiJ_T0017138.1 MGP_WSBEiJ_G0014813.1 mouse_genomes_project 2 7638398 7678282 - Gm13261 processed_transcript processed_transcript MGP_WSBEiJ_T0097034.1 MGP_WSBEiJ_G0035715.1 mouse_genomes_project 2 148534929 148535023 + Gm22731 rRNA rRNA MGP_WSBEiJ_T0055244.1 MGP_WSBEiJ_G0025430.1 mouse_genomes_project 2 94540673 94580646 + MGP_WSBEiJ_P0055244 Alx4 protein_coding protein_coding MGP_WSBEiJ_T0055245.1 MGP_WSBEiJ_G0025430.1 mouse_genomes_project 2 94540677 94580646 + MGP_WSBEiJ_P0055245 Alx4 protein_coding protein_coding MGP_WSBEiJ_T0013345.1 MGP_WSBEiJ_G0011475.1 mouse_genomes_project 2 107714925 107715195 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007258.1 MGP_WSBEiJ_G0005954.1 mouse_genomes_project 2 160353442 160354445 - Gm14174 lincRNA lincRNA MGP_WSBEiJ_T0055627.1 MGP_WSBEiJ_G0025532.1 mouse_genomes_project 2 113762830 113763766 - MGP_WSBEiJ_P0055627 Olfr1313 protein_coding protein_coding MGP_WSBEiJ_T0056535.1 MGP_WSBEiJ_G0025733.1 mouse_genomes_project 2 131529912 131531282 - MGP_WSBEiJ_P0056535 Gm10762 protein_coding protein_coding MGP_WSBEiJ_T0052010.1 MGP_WSBEiJ_G0024691.1 mouse_genomes_project 2 22956866 22960335 + MGP_WSBEiJ_P0052010 Fam166a protein_coding protein_coding MGP_WSBEiJ_T0054917.1 MGP_WSBEiJ_G0025381.1 mouse_genomes_project 2 91065072 91068043 + MGP_WSBEiJ_P0054917 protein_coding protein_coding MGP_WSBEiJ_T0007035.1 MGP_WSBEiJ_G0005775.1 mouse_genomes_project 2 8665224 8726254 - 8030442B05Rik lincRNA lincRNA MGP_WSBEiJ_T0054818.1 MGP_WSBEiJ_G0025305.1 mouse_genomes_project 2 89052930 89053878 + MGP_WSBEiJ_P0054818 Olfr1176 protein_coding protein_coding MGP_WSBEiJ_T0099380.1 MGP_WSBEiJ_G0038043.1 mouse_genomes_project 2 131324395 131324519 + Gm23172 snoRNA snoRNA MGP_WSBEiJ_T0010214.1 MGP_WSBEiJ_G0008371.1 mouse_genomes_project 2 20276248 20276316 + Mir3967 miRNA miRNA MGP_WSBEiJ_T0054611.1 MGP_WSBEiJ_G0025165.1 mouse_genomes_project 2 85076735 85083296 - MGP_WSBEiJ_P0054611 Tmx2 protein_coding protein_coding MGP_WSBEiJ_T0054612.1 MGP_WSBEiJ_G0025165.1 mouse_genomes_project 2 85076735 85082586 - MGP_WSBEiJ_P0054612 Tmx2 protein_coding protein_coding MGP_WSBEiJ_T0054613.1 MGP_WSBEiJ_G0025165.1 mouse_genomes_project 2 85076736 85082524 - MGP_WSBEiJ_P0054613 Tmx2 protein_coding protein_coding MGP_WSBEiJ_T0054614.1 MGP_WSBEiJ_G0025165.1 mouse_genomes_project 2 85076927 85082511 - Tmx2 protein_coding processed_transcript MGP_WSBEiJ_T0054615.1 MGP_WSBEiJ_G0025165.1 mouse_genomes_project 2 85080583 85083608 - MGP_WSBEiJ_P0054615 Tmx2 protein_coding protein_coding MGP_WSBEiJ_T0058643.1 MGP_WSBEiJ_G0026242.1 mouse_genomes_project 2 185652925 185700720 + MGP_WSBEiJ_P0058643 Ntsr1 protein_coding protein_coding MGP_WSBEiJ_T0058644.1 MGP_WSBEiJ_G0026242.1 mouse_genomes_project 2 185653176 185699959 + MGP_WSBEiJ_P0058644 Ntsr1 protein_coding protein_coding MGP_WSBEiJ_T0057770.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160875682 160916597 - MGP_WSBEiJ_P0057770 Samhd1 protein_coding protein_coding MGP_WSBEiJ_T0057771.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160878008 160916452 - MGP_WSBEiJ_P0057771 Samhd1 protein_coding protein_coding MGP_WSBEiJ_T0057772.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160878008 160916425 - MGP_WSBEiJ_P0057772 Samhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057773.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160879967 160916554 - MGP_WSBEiJ_P0057773 Samhd1 protein_coding protein_coding MGP_WSBEiJ_T0057774.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160880301 160889679 - Samhd1 protein_coding retained_intron MGP_WSBEiJ_T0057775.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160882583 160916538 - MGP_WSBEiJ_P0057775 Samhd1 protein_coding protein_coding MGP_WSBEiJ_T0057776.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160888346 160889678 - Samhd1 protein_coding retained_intron MGP_WSBEiJ_T0057777.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160898656 160916269 - Samhd1 protein_coding retained_intron MGP_WSBEiJ_T0057778.1 MGP_WSBEiJ_G0026025.1 mouse_genomes_project 2 160900939 160909150 - Samhd1 protein_coding retained_intron MGP_WSBEiJ_T0055614.1 MGP_WSBEiJ_G0025519.1 mouse_genomes_project 2 113284042 113284981 - MGP_WSBEiJ_P0055614 protein_coding protein_coding MGP_WSBEiJ_T0055129.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92496966 92706809 + MGP_WSBEiJ_P0055129 Ambra1 protein_coding protein_coding MGP_WSBEiJ_T0055130.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92496970 92706808 + MGP_WSBEiJ_P0055130 Ambra1 protein_coding protein_coding MGP_WSBEiJ_T0055131.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92497014 92590775 + Ambra1 protein_coding processed_transcript MGP_WSBEiJ_T0055132.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92497014 92590775 + Ambra1 protein_coding processed_transcript MGP_WSBEiJ_T0055133.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92497016 92706808 + MGP_WSBEiJ_P0055133 Ambra1 protein_coding protein_coding MGP_WSBEiJ_T0055134.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92497057 92706809 + MGP_WSBEiJ_P0055134 Ambra1 protein_coding protein_coding MGP_WSBEiJ_T0055135.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92541586 92706809 + MGP_WSBEiJ_P0055135 Ambra1 protein_coding protein_coding MGP_WSBEiJ_T0055136.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92549219 92604802 + Ambra1 protein_coding processed_transcript MGP_WSBEiJ_T0055137.1 MGP_WSBEiJ_G0025410.1 mouse_genomes_project 2 92591469 92605635 + Ambra1 protein_coding processed_transcript MGP_WSBEiJ_T0097207.1 MGP_WSBEiJ_G0035888.1 mouse_genomes_project 2 160728080 160728216 - Gm27653 scaRNA scaRNA MGP_WSBEiJ_T0013236.1 MGP_WSBEiJ_G0011366.1 mouse_genomes_project 2 69433176 69433641 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007318.1 MGP_WSBEiJ_G0006005.1 mouse_genomes_project 2 179814448 179827093 - Gm14618 lincRNA lincRNA MGP_WSBEiJ_T0052275.1 MGP_WSBEiJ_G0024747.1 mouse_genomes_project 2 24093319 24099117 - MGP_WSBEiJ_P0052275 C030048H21Rik protein_coding protein_coding MGP_WSBEiJ_T0056452.1 MGP_WSBEiJ_G0025711.1 mouse_genomes_project 2 129825270 129844261 + MGP_WSBEiJ_P0056452 Astl protein_coding protein_coding MGP_WSBEiJ_T0056453.1 MGP_WSBEiJ_G0025711.1 mouse_genomes_project 2 129828260 129844260 + MGP_WSBEiJ_P0056453 Astl protein_coding protein_coding MGP_WSBEiJ_T0056454.1 MGP_WSBEiJ_G0025711.1 mouse_genomes_project 2 129828274 129844259 + MGP_WSBEiJ_P0056454 Astl protein_coding protein_coding MGP_WSBEiJ_T0056455.1 MGP_WSBEiJ_G0025711.1 mouse_genomes_project 2 129828548 129836791 + MGP_WSBEiJ_P0056455 Astl protein_coding protein_coding MGP_WSBEiJ_T0051900.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22304939 22469062 - MGP_WSBEiJ_P0051900 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0051901.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22304946 22469039 - MGP_WSBEiJ_P0051901 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0051902.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22307425 22468957 - MGP_WSBEiJ_P0051902 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0051903.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22307429 22308585 - MGP_WSBEiJ_P0051903 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0051904.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22307620 22468957 - MGP_WSBEiJ_P0051904 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0051905.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22307620 22468957 - MGP_WSBEiJ_P0051905 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0051906.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22309041 22319371 - MGP_WSBEiJ_P0051906 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0051907.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22310981 22340436 - MGP_WSBEiJ_P0051907 Cacna1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051908.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22325318 22334777 - MGP_WSBEiJ_P0051908 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0051909.1 MGP_WSBEiJ_G0024677.1 mouse_genomes_project 2 22383933 22390302 - MGP_WSBEiJ_P0051909 Cacna1b protein_coding protein_coding MGP_WSBEiJ_T0013414.1 MGP_WSBEiJ_G0011544.1 mouse_genomes_project 2 144005784 144006271 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052052.1 MGP_WSBEiJ_G0024702.1 mouse_genomes_project 2 23029448 23030491 + MGP_WSBEiJ_P0052052 Tmem210 protein_coding protein_coding MGP_WSBEiJ_T0052053.1 MGP_WSBEiJ_G0024702.1 mouse_genomes_project 2 23029504 23030493 + Tmem210 protein_coding processed_transcript MGP_WSBEiJ_T0057168.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154360925 154442994 - MGP_WSBEiJ_P0057168 Ninl protein_coding protein_coding MGP_WSBEiJ_T0057169.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154363423 154368434 - Ninl protein_coding processed_transcript MGP_WSBEiJ_T0057170.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154363937 154383324 - MGP_WSBEiJ_P0057170 Ninl protein_coding protein_coding MGP_WSBEiJ_T0057171.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154383022 154384457 - Ninl protein_coding retained_intron MGP_WSBEiJ_T0057172.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154389072 154404054 - MGP_WSBEiJ_P0057172 Ninl protein_coding protein_coding MGP_WSBEiJ_T0057173.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154396308 154404188 - Ninl protein_coding processed_transcript MGP_WSBEiJ_T0057174.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154396400 154442928 - Ninl protein_coding processed_transcript MGP_WSBEiJ_T0057175.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154399131 154442972 - Ninl protein_coding processed_transcript MGP_WSBEiJ_T0057176.1 MGP_WSBEiJ_G0025887.1 mouse_genomes_project 2 154407092 154474848 - MGP_WSBEiJ_P0057176 Ninl protein_coding protein_coding MGP_WSBEiJ_T0054914.1 MGP_WSBEiJ_G0025378.1 mouse_genomes_project 2 90965787 90966378 - MGP_WSBEiJ_P0054914 protein_coding protein_coding MGP_WSBEiJ_T0055376.1 MGP_WSBEiJ_G0025455.1 mouse_genomes_project 2 104550848 104590817 - MGP_WSBEiJ_P0055376 Ehf protein_coding protein_coding MGP_WSBEiJ_T0055377.1 MGP_WSBEiJ_G0025455.1 mouse_genomes_project 2 104551440 104590705 - MGP_WSBEiJ_P0055377 Ehf protein_coding protein_coding MGP_WSBEiJ_T0055378.1 MGP_WSBEiJ_G0025455.1 mouse_genomes_project 2 104553958 104571332 - MGP_WSBEiJ_P0055378 Ehf protein_coding protein_coding MGP_WSBEiJ_T0055379.1 MGP_WSBEiJ_G0025455.1 mouse_genomes_project 2 104554155 104561742 - Ehf protein_coding retained_intron MGP_WSBEiJ_T0055380.1 MGP_WSBEiJ_G0025455.1 mouse_genomes_project 2 104554523 104587102 - MGP_WSBEiJ_P0055380 Ehf protein_coding protein_coding MGP_WSBEiJ_T0055381.1 MGP_WSBEiJ_G0025455.1 mouse_genomes_project 2 104561593 104578509 - MGP_WSBEiJ_P0055381 Ehf protein_coding protein_coding MGP_WSBEiJ_T0055382.1 MGP_WSBEiJ_G0025455.1 mouse_genomes_project 2 104564294 104590459 - MGP_WSBEiJ_P0055382 Ehf protein_coding protein_coding MGP_WSBEiJ_T0055383.1 MGP_WSBEiJ_G0025455.1 mouse_genomes_project 2 104566617 104590706 - Ehf protein_coding retained_intron MGP_WSBEiJ_T0100702.1 MGP_WSBEiJ_G0039160.1 mouse_genomes_project 2 86106375 86107320 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0054731.1 MGP_WSBEiJ_G0025231.1 mouse_genomes_project 2 86992937 86993990 - MGP_WSBEiJ_P0054731 Olfr1065 protein_coding protein_coding MGP_WSBEiJ_T0013346.1 MGP_WSBEiJ_G0011476.1 mouse_genomes_project 2 108387534 108388002 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054632.1 MGP_WSBEiJ_G0025172.1 mouse_genomes_project 2 85210029 85217877 + MGP_WSBEiJ_P0054632 protein_coding protein_coding MGP_WSBEiJ_T0054633.1 MGP_WSBEiJ_G0025172.1 mouse_genomes_project 2 85210104 85221644 + MGP_WSBEiJ_P0054633 protein_coding unknown_likely_coding MGP_WSBEiJ_T0054634.1 MGP_WSBEiJ_G0025172.1 mouse_genomes_project 2 85214185 85223054 + protein_coding processed_transcript MGP_WSBEiJ_T0054635.1 MGP_WSBEiJ_G0025172.1 mouse_genomes_project 2 85217714 85221233 + protein_coding retained_intron MGP_WSBEiJ_T0053705.1 MGP_WSBEiJ_G0024993.1 mouse_genomes_project 2 50866141 50877567 - MGP_WSBEiJ_P0053705 Rbm43 protein_coding protein_coding MGP_WSBEiJ_T0053706.1 MGP_WSBEiJ_G0024993.1 mouse_genomes_project 2 50866141 50877723 - MGP_WSBEiJ_P0053706 Rbm43 protein_coding protein_coding MGP_WSBEiJ_T0053707.1 MGP_WSBEiJ_G0024993.1 mouse_genomes_project 2 50866144 50877204 - MGP_WSBEiJ_P0053707 Rbm43 protein_coding protein_coding MGP_WSBEiJ_T0053708.1 MGP_WSBEiJ_G0024993.1 mouse_genomes_project 2 50867075 50868705 - Rbm43 protein_coding processed_transcript MGP_WSBEiJ_T0053709.1 MGP_WSBEiJ_G0024993.1 mouse_genomes_project 2 50867340 50874977 - Rbm43 protein_coding processed_transcript MGP_WSBEiJ_T0053710.1 MGP_WSBEiJ_G0024993.1 mouse_genomes_project 2 50867559 50877234 - Rbm43 protein_coding processed_transcript MGP_WSBEiJ_T0057064.1 MGP_WSBEiJ_G0025851.1 mouse_genomes_project 2 149424261 149427343 + MGP_WSBEiJ_P0057064 Insm1 protein_coding protein_coding MGP_WSBEiJ_T0013163.1 MGP_WSBEiJ_G0011293.1 mouse_genomes_project 2 38644597 38645031 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054694.1 MGP_WSBEiJ_G0025195.1 mouse_genomes_project 2 86170565 86171507 + MGP_WSBEiJ_P0054694 Olfr1008 protein_coding protein_coding MGP_WSBEiJ_T0001005.1 MGP_WSBEiJ_G0000940.1 mouse_genomes_project 2 9768218 9770825 - TEC TEC MGP_WSBEiJ_T0004050.1 MGP_WSBEiJ_G0003586.1 mouse_genomes_project 2 158282714 158285343 - antisense antisense MGP_WSBEiJ_T0100696.1 MGP_WSBEiJ_G0039154.1 mouse_genomes_project 2 69892003 69894177 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010295.1 MGP_WSBEiJ_G0008452.1 mouse_genomes_project 2 147805596 147805691 - Gm24823 miRNA miRNA MGP_WSBEiJ_T0013125.1 MGP_WSBEiJ_G0011255.1 mouse_genomes_project 2 23818077 23818710 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058371.1 MGP_WSBEiJ_G0026167.1 mouse_genomes_project 2 172102965 172104471 + MGP_WSBEiJ_P0058371 Cebpb protein_coding protein_coding MGP_WSBEiJ_T0055293.1 MGP_WSBEiJ_G0025437.1 mouse_genomes_project 2 94944998 94980460 - Hsd17b12 protein_coding processed_transcript MGP_WSBEiJ_T0055294.1 MGP_WSBEiJ_G0025437.1 mouse_genomes_project 2 94944998 95072256 - MGP_WSBEiJ_P0055294 Hsd17b12 protein_coding protein_coding MGP_WSBEiJ_T0055295.1 MGP_WSBEiJ_G0025437.1 mouse_genomes_project 2 94945011 95072201 - Hsd17b12 protein_coding processed_transcript MGP_WSBEiJ_T0055296.1 MGP_WSBEiJ_G0025437.1 mouse_genomes_project 2 94945831 94980755 - Hsd17b12 protein_coding processed_transcript MGP_WSBEiJ_T0055297.1 MGP_WSBEiJ_G0025437.1 mouse_genomes_project 2 95028524 95072185 - Hsd17b12 protein_coding processed_transcript MGP_WSBEiJ_T0052044.1 MGP_WSBEiJ_G0024700.1 mouse_genomes_project 2 23009445 23010817 - Ssna1 protein_coding processed_transcript MGP_WSBEiJ_T0052045.1 MGP_WSBEiJ_G0024700.1 mouse_genomes_project 2 23009445 23010823 - MGP_WSBEiJ_P0052045 Ssna1 protein_coding protein_coding MGP_WSBEiJ_T0052046.1 MGP_WSBEiJ_G0024700.1 mouse_genomes_project 2 23009492 23010845 - Ssna1 protein_coding processed_transcript MGP_WSBEiJ_T0052047.1 MGP_WSBEiJ_G0024700.1 mouse_genomes_project 2 23010112 23010811 - Ssna1 protein_coding processed_transcript MGP_WSBEiJ_T0013340.1 MGP_WSBEiJ_G0011470.1 mouse_genomes_project 2 106207969 106209152 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098110.1 MGP_WSBEiJ_G0036773.1 mouse_genomes_project 2 81311266 81311373 - Gm23452 snRNA snRNA MGP_WSBEiJ_T0057223.1 MGP_WSBEiJ_G0025902.1 mouse_genomes_project 2 155713532 155764579 + MGP_WSBEiJ_P0057223 Csnk2a1 protein_coding protein_coding MGP_WSBEiJ_T0057224.1 MGP_WSBEiJ_G0025902.1 mouse_genomes_project 2 155713569 155755496 + Csnk2a1 protein_coding retained_intron MGP_WSBEiJ_T0057225.1 MGP_WSBEiJ_G0025902.1 mouse_genomes_project 2 155713589 155749393 + MGP_WSBEiJ_P0057225 Csnk2a1 protein_coding protein_coding MGP_WSBEiJ_T0057226.1 MGP_WSBEiJ_G0025902.1 mouse_genomes_project 2 155713601 155745960 + MGP_WSBEiJ_P0057226 Csnk2a1 protein_coding protein_coding MGP_WSBEiJ_T0057227.1 MGP_WSBEiJ_G0025902.1 mouse_genomes_project 2 155713606 155741410 + Csnk2a1 protein_coding retained_intron MGP_WSBEiJ_T0017160.1 MGP_WSBEiJ_G0014825.1 mouse_genomes_project 2 25431199 25434142 + Gm13421 processed_transcript processed_transcript MGP_WSBEiJ_T0017161.1 MGP_WSBEiJ_G0014825.1 mouse_genomes_project 2 25431202 25433964 + Gm13421 processed_transcript processed_transcript MGP_WSBEiJ_T0003904.1 MGP_WSBEiJ_G0003482.1 mouse_genomes_project 2 59743501 59746665 + Gm13583 antisense antisense MGP_WSBEiJ_T0003905.1 MGP_WSBEiJ_G0003482.1 mouse_genomes_project 2 59743503 59743626 + Gm13583 antisense antisense MGP_WSBEiJ_T0003906.1 MGP_WSBEiJ_G0003482.1 mouse_genomes_project 2 59745096 59746016 + Gm13583 antisense antisense MGP_WSBEiJ_T0013395.1 MGP_WSBEiJ_G0011525.1 mouse_genomes_project 2 133640538 133641104 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057412.1 MGP_WSBEiJ_G0025963.1 mouse_genomes_project 2 158004531 158039656 - MGP_WSBEiJ_P0057412 Snta1 protein_coding protein_coding MGP_WSBEiJ_T0057413.1 MGP_WSBEiJ_G0025963.1 mouse_genomes_project 2 158004531 158039638 - MGP_WSBEiJ_P0057413 Snta1 protein_coding protein_coding MGP_WSBEiJ_T0057414.1 MGP_WSBEiJ_G0025963.1 mouse_genomes_project 2 158030800 158039537 - Snta1 protein_coding processed_transcript MGP_WSBEiJ_T0057742.1 MGP_WSBEiJ_G0026018.1 mouse_genomes_project 2 160612388 160613719 - MGP_WSBEiJ_P0057742 4930518I15Rik protein_coding protein_coding MGP_WSBEiJ_T0053457.1 MGP_WSBEiJ_G0024942.1 mouse_genomes_project 2 35313330 35314278 + MGP_WSBEiJ_P0053457 Olfr352 protein_coding protein_coding MGP_WSBEiJ_T0053311.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33188787 33210857 - Fbxw2 protein_coding processed_transcript MGP_WSBEiJ_T0053312.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33189452 33214020 - MGP_WSBEiJ_P0053312 Fbxw2 protein_coding protein_coding MGP_WSBEiJ_T0053313.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33189612 33211118 - MGP_WSBEiJ_P0053313 Fbxw2 protein_coding protein_coding MGP_WSBEiJ_T0053314.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33189613 33214182 - MGP_WSBEiJ_P0053314 Fbxw2 protein_coding protein_coding MGP_WSBEiJ_T0053315.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33189615 33214177 - MGP_WSBEiJ_P0053315 Fbxw2 protein_coding protein_coding MGP_WSBEiJ_T0053316.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33189615 33214018 - MGP_WSBEiJ_P0053316 Fbxw2 protein_coding protein_coding MGP_WSBEiJ_T0053317.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33190527 33214148 - MGP_WSBEiJ_P0053317 Fbxw2 protein_coding protein_coding MGP_WSBEiJ_T0053318.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33191552 33192936 - Fbxw2 protein_coding processed_transcript MGP_WSBEiJ_T0053319.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33196114 33214258 - Fbxw2 protein_coding processed_transcript MGP_WSBEiJ_T0053320.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33197016 33214114 - Fbxw2 protein_coding processed_transcript MGP_WSBEiJ_T0053321.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33199547 33214164 - Fbxw2 protein_coding processed_transcript MGP_WSBEiJ_T0053322.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33209807 33214154 - Fbxw2 protein_coding retained_intron MGP_WSBEiJ_T0053323.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33210540 33213969 - Fbxw2 protein_coding processed_transcript MGP_WSBEiJ_T0053324.1 MGP_WSBEiJ_G0024907.1 mouse_genomes_project 2 33213205 33214162 - Fbxw2 protein_coding processed_transcript MGP_WSBEiJ_T0013219.1 MGP_WSBEiJ_G0011349.1 mouse_genomes_project 2 61261073 61261386 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007236.1 MGP_WSBEiJ_G0005936.1 mouse_genomes_project 2 147345216 147362203 - lincRNA lincRNA MGP_WSBEiJ_T0007237.1 MGP_WSBEiJ_G0005936.1 mouse_genomes_project 2 147346381 147352006 - lincRNA lincRNA MGP_WSBEiJ_T0053835.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58763968 59004898 + MGP_WSBEiJ_P0053835 Tanc1 protein_coding protein_coding MGP_WSBEiJ_T0053836.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58763999 58801113 + Tanc1 protein_coding retained_intron MGP_WSBEiJ_T0053837.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58781971 58798657 + Tanc1 protein_coding retained_intron MGP_WSBEiJ_T0053838.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58798462 59004470 + MGP_WSBEiJ_P0053838 Tanc1 protein_coding protein_coding MGP_WSBEiJ_T0053839.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58848304 59004579 + MGP_WSBEiJ_P0053839 Tanc1 protein_coding protein_coding MGP_WSBEiJ_T0053840.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58861068 58878670 + Tanc1 protein_coding processed_transcript MGP_WSBEiJ_T0053841.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58900410 58979522 + Tanc1 protein_coding retained_intron MGP_WSBEiJ_T0053842.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58927424 58930513 + Tanc1 protein_coding processed_transcript MGP_WSBEiJ_T0053843.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58937545 58943331 + Tanc1 protein_coding processed_transcript MGP_WSBEiJ_T0053844.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 58963739 58967177 + Tanc1 protein_coding retained_intron MGP_WSBEiJ_T0053845.1 MGP_WSBEiJ_G0025020.1 mouse_genomes_project 2 59000599 59004468 + Tanc1 protein_coding retained_intron MGP_WSBEiJ_T0010252.1 MGP_WSBEiJ_G0008409.1 mouse_genomes_project 2 61047433 61047517 - Gm22403 miRNA miRNA MGP_WSBEiJ_T0054335.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74399660 74468316 - MGP_WSBEiJ_P0054335 Lnpk1 protein_coding protein_coding MGP_WSBEiJ_T0054336.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74399703 74468316 - MGP_WSBEiJ_P0054336 Lnpk1 protein_coding protein_coding MGP_WSBEiJ_T0054337.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74399710 74412538 - Lnpk1 protein_coding processed_transcript MGP_WSBEiJ_T0054338.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74400702 74468299 - Lnpk1 protein_coding processed_transcript MGP_WSBEiJ_T0054339.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74401407 74467592 - MGP_WSBEiJ_P0054339 Lnpk1 protein_coding protein_coding MGP_WSBEiJ_T0054340.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74411340 74468747 - MGP_WSBEiJ_P0054340 Lnpk1 protein_coding protein_coding MGP_WSBEiJ_T0054341.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74417244 74467885 - MGP_WSBEiJ_P0054341 Lnpk1 protein_coding protein_coding MGP_WSBEiJ_T0054342.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74428830 74437222 - Lnpk1 protein_coding processed_transcript MGP_WSBEiJ_T0054343.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74429664 74468803 - Lnpk1 protein_coding processed_transcript MGP_WSBEiJ_T0054344.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74432715 74433710 - Lnpk1 protein_coding processed_transcript MGP_WSBEiJ_T0054345.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74433220 74468284 - Lnpk1 protein_coding processed_transcript MGP_WSBEiJ_T0054346.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74454823 74468248 - Lnpk1 protein_coding processed_transcript MGP_WSBEiJ_T0054347.1 MGP_WSBEiJ_G0025107.1 mouse_genomes_project 2 74455088 74468262 - MGP_WSBEiJ_P0054347 Lnpk1 protein_coding protein_coding MGP_WSBEiJ_T0013164.1 MGP_WSBEiJ_G0011294.1 mouse_genomes_project 2 38645841 38646208 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099382.1 MGP_WSBEiJ_G0038045.1 mouse_genomes_project 2 132692161 132692290 + Gm24665 snoRNA snoRNA MGP_WSBEiJ_T0054294.1 MGP_WSBEiJ_G0025101.1 mouse_genomes_project 2 73197564 73245640 - MGP_WSBEiJ_P0054294 Gpr155 protein_coding protein_coding MGP_WSBEiJ_T0054295.1 MGP_WSBEiJ_G0025101.1 mouse_genomes_project 2 73198016 73245480 - MGP_WSBEiJ_P0054295 Gpr155 protein_coding protein_coding MGP_WSBEiJ_T0054296.1 MGP_WSBEiJ_G0025101.1 mouse_genomes_project 2 73199048 73245511 - MGP_WSBEiJ_P0054296 Gpr155 protein_coding protein_coding MGP_WSBEiJ_T0054297.1 MGP_WSBEiJ_G0025101.1 mouse_genomes_project 2 73203703 73221564 - MGP_WSBEiJ_P0054297 Gpr155 protein_coding protein_coding MGP_WSBEiJ_T0054298.1 MGP_WSBEiJ_G0025101.1 mouse_genomes_project 2 73208183 73245466 - Gpr155 protein_coding processed_transcript MGP_WSBEiJ_T0054299.1 MGP_WSBEiJ_G0025101.1 mouse_genomes_project 2 73208183 73245466 - Gpr155 protein_coding retained_intron MGP_WSBEiJ_T0054300.1 MGP_WSBEiJ_G0025101.1 mouse_genomes_project 2 73221472 73229184 - Gpr155 protein_coding processed_transcript MGP_WSBEiJ_T0054301.1 MGP_WSBEiJ_G0025101.1 mouse_genomes_project 2 73240474 73245479 - Gpr155 protein_coding retained_intron MGP_WSBEiJ_T0053388.1 MGP_WSBEiJ_G0024918.1 mouse_genomes_project 2 33759034 33776302 - MGP_WSBEiJ_P0053388 4930568D16Rik protein_coding protein_coding MGP_WSBEiJ_T0010263.1 MGP_WSBEiJ_G0008420.1 mouse_genomes_project 2 85149018 85149082 - Mir130a miRNA miRNA MGP_WSBEiJ_T0056389.1 MGP_WSBEiJ_G0025698.1 mouse_genomes_project 2 129208054 129220947 - Usp50 protein_coding processed_transcript MGP_WSBEiJ_T0056390.1 MGP_WSBEiJ_G0025698.1 mouse_genomes_project 2 129208425 129234499 - MGP_WSBEiJ_P0056390 Usp50 protein_coding protein_coding MGP_WSBEiJ_T0056391.1 MGP_WSBEiJ_G0025698.1 mouse_genomes_project 2 129226909 129234492 - MGP_WSBEiJ_P0056391 Usp50 protein_coding protein_coding MGP_WSBEiJ_T0056392.1 MGP_WSBEiJ_G0025698.1 mouse_genomes_project 2 129228794 129234513 - Usp50 protein_coding retained_intron MGP_WSBEiJ_T0003872.1 MGP_WSBEiJ_G0003457.1 mouse_genomes_project 2 30187525 30188365 - Gm13442 antisense antisense MGP_WSBEiJ_T0010229.1 MGP_WSBEiJ_G0008386.1 mouse_genomes_project 2 28027679 28027750 + Mir6997 miRNA miRNA MGP_WSBEiJ_T0003870.1 MGP_WSBEiJ_G0003455.1 mouse_genomes_project 2 29870222 29882274 - Gm13427 antisense antisense MGP_WSBEiJ_T0058333.1 MGP_WSBEiJ_G0026158.1 mouse_genomes_project 2 171455002 171549020 - MGP_WSBEiJ_P0058333 Kcnb1 protein_coding protein_coding MGP_WSBEiJ_T0013297.1 MGP_WSBEiJ_G0011427.1 mouse_genomes_project 2 88364072 88364529 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013440.1 MGP_WSBEiJ_G0011570.1 mouse_genomes_project 2 150946283 150946722 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007173.1 MGP_WSBEiJ_G0005884.1 mouse_genomes_project 2 104630180 104664227 - A930006I01Rik lincRNA lincRNA MGP_WSBEiJ_T0057424.1 MGP_WSBEiJ_G0025965.1 mouse_genomes_project 2 158192504 158208452 - MGP_WSBEiJ_P0057424 Necab3 protein_coding protein_coding MGP_WSBEiJ_T0057425.1 MGP_WSBEiJ_G0025965.1 mouse_genomes_project 2 158192504 158208467 - MGP_WSBEiJ_P0057425 Necab3 protein_coding protein_coding MGP_WSBEiJ_T0057426.1 MGP_WSBEiJ_G0025965.1 mouse_genomes_project 2 158193150 158194900 - Necab3 protein_coding retained_intron MGP_WSBEiJ_T0057427.1 MGP_WSBEiJ_G0025965.1 mouse_genomes_project 2 158195151 158208491 - MGP_WSBEiJ_P0057427 Necab3 protein_coding protein_coding MGP_WSBEiJ_T0057429.1 MGP_WSBEiJ_G0025965.1 mouse_genomes_project 2 158195246 158208445 - Necab3 protein_coding processed_transcript MGP_WSBEiJ_T0057433.1 MGP_WSBEiJ_G0025965.1 mouse_genomes_project 2 158203912 158208453 - Necab3 protein_coding retained_intron MGP_WSBEiJ_T0057434.1 MGP_WSBEiJ_G0025965.1 mouse_genomes_project 2 158204290 158206880 - Necab3 protein_coding retained_intron MGP_WSBEiJ_T0004002.1 MGP_WSBEiJ_G0003551.1 mouse_genomes_project 2 131960840 131968003 + Il1bos antisense antisense MGP_WSBEiJ_T0004003.1 MGP_WSBEiJ_G0003551.1 mouse_genomes_project 2 131960845 131967988 + Il1bos antisense antisense MGP_WSBEiJ_T0004004.1 MGP_WSBEiJ_G0003551.1 mouse_genomes_project 2 131965383 131967332 + Il1bos antisense antisense MGP_WSBEiJ_T0013455.1 MGP_WSBEiJ_G0011585.1 mouse_genomes_project 2 156250243 156250844 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004103.1 MGP_WSBEiJ_G0003627.1 mouse_genomes_project 2 179058756 179117920 - Gm10714 antisense antisense MGP_WSBEiJ_T0004104.1 MGP_WSBEiJ_G0003627.1 mouse_genomes_project 2 179059278 179059607 - Gm10714 antisense antisense MGP_WSBEiJ_T0058645.1 MGP_WSBEiJ_G0026243.1 mouse_genomes_project 2 185740952 185745323 + MGP_WSBEiJ_P0058645 Mrgbp protein_coding protein_coding MGP_WSBEiJ_T0058646.1 MGP_WSBEiJ_G0026243.1 mouse_genomes_project 2 185742360 185745976 + MGP_WSBEiJ_P0058646 Mrgbp protein_coding protein_coding MGP_WSBEiJ_T0058647.1 MGP_WSBEiJ_G0026243.1 mouse_genomes_project 2 185742371 185745993 + Mrgbp protein_coding retained_intron MGP_WSBEiJ_T0058648.1 MGP_WSBEiJ_G0026243.1 mouse_genomes_project 2 185742374 185745993 + Mrgbp protein_coding retained_intron MGP_WSBEiJ_T0058649.1 MGP_WSBEiJ_G0026243.1 mouse_genomes_project 2 185742380 185745993 + Mrgbp protein_coding retained_intron MGP_WSBEiJ_T0058650.1 MGP_WSBEiJ_G0026243.1 mouse_genomes_project 2 185742406 185745993 + Mrgbp protein_coding retained_intron MGP_WSBEiJ_T0100714.1 MGP_WSBEiJ_G0039172.1 mouse_genomes_project 2 87075839 87076781 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007068.1 MGP_WSBEiJ_G0005799.1 mouse_genomes_project 2 31813178 31830741 + Gm13530 lincRNA lincRNA MGP_WSBEiJ_T0017163.1 MGP_WSBEiJ_G0014827.1 mouse_genomes_project 2 25945714 25950707 - Gm13372 processed_transcript processed_transcript MGP_WSBEiJ_T0001015.1 MGP_WSBEiJ_G0000950.1 mouse_genomes_project 2 11580918 11584390 + TEC TEC MGP_WSBEiJ_T0013306.1 MGP_WSBEiJ_G0011436.1 mouse_genomes_project 2 92482654 92483915 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052516.1 MGP_WSBEiJ_G0024789.1 mouse_genomes_project 2 26442235 26448606 + Gbgt1 protein_coding processed_transcript MGP_WSBEiJ_T0052517.1 MGP_WSBEiJ_G0024789.1 mouse_genomes_project 2 26442235 26450759 + MGP_WSBEiJ_P0052517 Gbgt1 protein_coding protein_coding MGP_WSBEiJ_T0052518.1 MGP_WSBEiJ_G0024789.1 mouse_genomes_project 2 26443080 26450759 + MGP_WSBEiJ_P0052518 Gbgt1 protein_coding protein_coding MGP_WSBEiJ_T0013204.1 MGP_WSBEiJ_G0011334.1 mouse_genomes_project 2 56765794 56765971 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013368.1 MGP_WSBEiJ_G0011498.1 mouse_genomes_project 2 116847799 116848693 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051319.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1006306 1163201 + Frmd4a protein_coding processed_transcript MGP_WSBEiJ_T0051320.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1006323 1010494 + Frmd4a protein_coding retained_intron MGP_WSBEiJ_T0051321.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1006333 1632873 + MGP_WSBEiJ_P0051321 Frmd4a protein_coding protein_coding MGP_WSBEiJ_T0051322.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1148575 1167620 + Frmd4a protein_coding processed_transcript MGP_WSBEiJ_T0051323.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1148584 1632774 + MGP_WSBEiJ_P0051323 Frmd4a protein_coding protein_coding MGP_WSBEiJ_T0051324.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1296961 1585015 + MGP_WSBEiJ_P0051324 Frmd4a protein_coding protein_coding MGP_WSBEiJ_T0051325.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1297316 1550019 + Frmd4a protein_coding retained_intron MGP_WSBEiJ_T0051326.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1297434 1571398 + MGP_WSBEiJ_P0051326 Frmd4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051327.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1331878 1612902 + MGP_WSBEiJ_P0051327 Frmd4a protein_coding protein_coding MGP_WSBEiJ_T0051328.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1393303 1539670 + MGP_WSBEiJ_P0051328 Frmd4a protein_coding protein_coding MGP_WSBEiJ_T0051329.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1393305 1440515 + Frmd4a protein_coding retained_intron MGP_WSBEiJ_T0051330.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1406924 1632875 + MGP_WSBEiJ_P0051330 Frmd4a protein_coding protein_coding MGP_WSBEiJ_T0051331.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1407386 1438367 + Frmd4a protein_coding retained_intron MGP_WSBEiJ_T0051332.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1407420 1548860 + Frmd4a protein_coding retained_intron MGP_WSBEiJ_T0051333.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1427471 1632877 + MGP_WSBEiJ_P0051333 Frmd4a protein_coding protein_coding MGP_WSBEiJ_T0051334.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1480115 1507252 + Frmd4a protein_coding retained_intron MGP_WSBEiJ_T0051335.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1570891 1616162 + Frmd4a protein_coding retained_intron MGP_WSBEiJ_T0051336.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1570912 1606441 + Frmd4a protein_coding retained_intron MGP_WSBEiJ_T0051337.1 MGP_WSBEiJ_G0024579.1 mouse_genomes_project 2 1577211 1612938 + MGP_WSBEiJ_P0051337 Frmd4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052762.1 MGP_WSBEiJ_G0024829.1 mouse_genomes_project 2 28342429 28405289 + MGP_WSBEiJ_P0052762 Nup188 protein_coding protein_coding MGP_WSBEiJ_T0052763.1 MGP_WSBEiJ_G0024829.1 mouse_genomes_project 2 28342429 28366343 + MGP_WSBEiJ_P0052763 Nup188 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052764.1 MGP_WSBEiJ_G0024829.1 mouse_genomes_project 2 28342449 28361230 + Nup188 protein_coding processed_transcript MGP_WSBEiJ_T0052765.1 MGP_WSBEiJ_G0024829.1 mouse_genomes_project 2 28342456 28360948 + MGP_WSBEiJ_P0052765 Nup188 protein_coding protein_coding MGP_WSBEiJ_T0052766.1 MGP_WSBEiJ_G0024829.1 mouse_genomes_project 2 28342459 28360947 + MGP_WSBEiJ_P0052766 Nup188 protein_coding protein_coding MGP_WSBEiJ_T0052767.1 MGP_WSBEiJ_G0024829.1 mouse_genomes_project 2 28342461 28387534 + Nup188 protein_coding retained_intron MGP_WSBEiJ_T0052768.1 MGP_WSBEiJ_G0024829.1 mouse_genomes_project 2 28403962 28405168 + Nup188 protein_coding retained_intron MGP_WSBEiJ_T0013141.1 MGP_WSBEiJ_G0011271.1 mouse_genomes_project 2 33918412 33918934 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013270.1 MGP_WSBEiJ_G0011400.1 mouse_genomes_project 2 81240160 81240775 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053154.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30980436 30987500 - Cdk9 protein_coding retained_intron MGP_WSBEiJ_T0053155.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30982058 30988720 - MGP_WSBEiJ_P0053155 Cdk9 protein_coding protein_coding MGP_WSBEiJ_T0053156.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30982461 30989526 - MGP_WSBEiJ_P0053156 Cdk9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053157.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30982729 30989460 - MGP_WSBEiJ_P0053157 Cdk9 protein_coding protein_coding MGP_WSBEiJ_T0053158.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30984553 30986174 - Cdk9 protein_coding retained_intron MGP_WSBEiJ_T0053159.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30985984 30986802 - Cdk9 protein_coding retained_intron MGP_WSBEiJ_T0053160.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30986108 30986955 - Cdk9 protein_coding retained_intron MGP_WSBEiJ_T0053161.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30986308 30989207 - MGP_WSBEiJ_P0053161 Cdk9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053162.1 MGP_WSBEiJ_G0024883.1 mouse_genomes_project 2 30986610 30988706 - MGP_WSBEiJ_P0053162 Cdk9 protein_coding protein_coding MGP_WSBEiJ_T0055725.1 MGP_WSBEiJ_G0025559.1 mouse_genomes_project 2 119023477 119087417 + MGP_WSBEiJ_P0055725 Spred1 protein_coding protein_coding MGP_WSBEiJ_T0055726.1 MGP_WSBEiJ_G0025559.1 mouse_genomes_project 2 119023741 119077983 + MGP_WSBEiJ_P0055726 Spred1 protein_coding protein_coding MGP_WSBEiJ_T0017294.1 MGP_WSBEiJ_G0014900.1 mouse_genomes_project 2 155828858 155861245 + Gm14164 processed_transcript processed_transcript MGP_WSBEiJ_T0017295.1 MGP_WSBEiJ_G0014900.1 mouse_genomes_project 2 155860668 155861070 + Gm14164 processed_transcript processed_transcript MGP_WSBEiJ_T0055741.1 MGP_WSBEiJ_G0025564.1 mouse_genomes_project 2 120239498 120340390 - MGP_WSBEiJ_P0055741 Gpr176 protein_coding protein_coding MGP_WSBEiJ_T0055445.1 MGP_WSBEiJ_G0025467.1 mouse_genomes_project 2 105463789 105465770 + MGP_WSBEiJ_P0055445 A930018P22Rik protein_coding protein_coding MGP_WSBEiJ_T0054980.1 MGP_WSBEiJ_G0025391.1 mouse_genomes_project 2 91746192 91756977 + MGP_WSBEiJ_P0054980 Rapsn protein_coding protein_coding MGP_WSBEiJ_T0054981.1 MGP_WSBEiJ_G0025391.1 mouse_genomes_project 2 91746199 91756974 + MGP_WSBEiJ_P0054981 Rapsn protein_coding protein_coding MGP_WSBEiJ_T0054982.1 MGP_WSBEiJ_G0025391.1 mouse_genomes_project 2 91746213 91756977 + MGP_WSBEiJ_P0054982 Rapsn protein_coding protein_coding MGP_WSBEiJ_T0054983.1 MGP_WSBEiJ_G0025391.1 mouse_genomes_project 2 91754036 91756728 + Rapsn protein_coding retained_intron MGP_WSBEiJ_T0056595.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132887828 132897447 + MGP_WSBEiJ_P0056595 protein_coding protein_coding MGP_WSBEiJ_T0056596.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132887842 132897446 + protein_coding retained_intron MGP_WSBEiJ_T0056597.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132887844 132897159 + protein_coding retained_intron MGP_WSBEiJ_T0056598.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132887853 132890936 + MGP_WSBEiJ_P0056598 protein_coding protein_coding MGP_WSBEiJ_T0056599.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132887890 132889497 + MGP_WSBEiJ_P0056599 protein_coding protein_coding MGP_WSBEiJ_T0056600.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132888229 132889095 + protein_coding retained_intron MGP_WSBEiJ_T0056601.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132889194 132889665 + protein_coding retained_intron MGP_WSBEiJ_T0056602.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132889557 132897139 + MGP_WSBEiJ_P0056602 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056603.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132889698 132894341 + protein_coding retained_intron MGP_WSBEiJ_T0056604.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132889873 132896131 + protein_coding retained_intron MGP_WSBEiJ_T0056605.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132889995 132896135 + MGP_WSBEiJ_P0056605 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056606.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132890063 132890681 + protein_coding retained_intron MGP_WSBEiJ_T0056607.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132890115 132897391 + MGP_WSBEiJ_P0056607 protein_coding protein_coding MGP_WSBEiJ_T0056608.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132890487 132897441 + protein_coding retained_intron MGP_WSBEiJ_T0056609.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132890555 132897412 + MGP_WSBEiJ_P0056609 protein_coding protein_coding MGP_WSBEiJ_T0056610.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132890713 132896406 + MGP_WSBEiJ_P0056610 protein_coding protein_coding MGP_WSBEiJ_T0056611.1 MGP_WSBEiJ_G0025751.1 mouse_genomes_project 2 132894481 132897414 + protein_coding retained_intron MGP_WSBEiJ_T0055298.1 MGP_WSBEiJ_G0025438.1 mouse_genomes_project 2 95220371 95328053 - MGP_WSBEiJ_P0055298 Ttc17 protein_coding protein_coding MGP_WSBEiJ_T0055299.1 MGP_WSBEiJ_G0025438.1 mouse_genomes_project 2 95220373 95328067 - MGP_WSBEiJ_P0055299 Ttc17 protein_coding protein_coding MGP_WSBEiJ_T0055300.1 MGP_WSBEiJ_G0025438.1 mouse_genomes_project 2 95247316 95328076 - MGP_WSBEiJ_P0055300 Ttc17 protein_coding protein_coding MGP_WSBEiJ_T0055301.1 MGP_WSBEiJ_G0025438.1 mouse_genomes_project 2 95273915 95281672 - Ttc17 protein_coding processed_transcript MGP_WSBEiJ_T0055302.1 MGP_WSBEiJ_G0025438.1 mouse_genomes_project 2 95298137 95326413 - Ttc17 protein_coding processed_transcript MGP_WSBEiJ_T0055478.1 MGP_WSBEiJ_G0025476.1 mouse_genomes_project 2 106254508 106340711 + MGP_WSBEiJ_P0055478 Ccdc73 protein_coding protein_coding MGP_WSBEiJ_T0055479.1 MGP_WSBEiJ_G0025476.1 mouse_genomes_project 2 106275280 106392075 + MGP_WSBEiJ_P0055479 Ccdc73 protein_coding protein_coding MGP_WSBEiJ_T0055480.1 MGP_WSBEiJ_G0025476.1 mouse_genomes_project 2 106296202 106381210 + MGP_WSBEiJ_P0055480 Ccdc73 protein_coding protein_coding MGP_WSBEiJ_T0055481.1 MGP_WSBEiJ_G0025476.1 mouse_genomes_project 2 106383376 106411235 + MGP_WSBEiJ_P0055481 Ccdc73 protein_coding protein_coding MGP_WSBEiJ_T0055486.1 MGP_WSBEiJ_G0025476.1 mouse_genomes_project 2 106410503 106411288 + Ccdc73 protein_coding processed_transcript MGP_WSBEiJ_T0052979.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30201429 30283782 + MGP_WSBEiJ_P0052979 Nup214 protein_coding protein_coding MGP_WSBEiJ_T0052980.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30201479 30206921 + Nup214 protein_coding retained_intron MGP_WSBEiJ_T0052981.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30206736 30218326 + Nup214 protein_coding processed_transcript MGP_WSBEiJ_T0052982.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30221757 30225634 + Nup214 protein_coding processed_transcript MGP_WSBEiJ_T0052983.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30224897 30231304 + MGP_WSBEiJ_P0052983 Nup214 protein_coding protein_coding MGP_WSBEiJ_T0052984.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30239696 30241070 + Nup214 protein_coding processed_transcript MGP_WSBEiJ_T0052985.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30256191 30263167 + Nup214 protein_coding processed_transcript MGP_WSBEiJ_T0052986.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30265420 30286065 + MGP_WSBEiJ_P0052986 Nup214 protein_coding protein_coding MGP_WSBEiJ_T0052987.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30273962 30283778 + MGP_WSBEiJ_P0052987 Nup214 protein_coding protein_coding MGP_WSBEiJ_T0052989.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30282405 30284265 + Nup214 protein_coding retained_intron MGP_WSBEiJ_T0052990.1 MGP_WSBEiJ_G0024859.1 mouse_genomes_project 2 30283102 30283776 + Nup214 protein_coding retained_intron MGP_WSBEiJ_T0007102.1 MGP_WSBEiJ_G0005826.1 mouse_genomes_project 2 54471076 54475423 - Gm26794 lincRNA lincRNA MGP_WSBEiJ_T0013370.1 MGP_WSBEiJ_G0011500.1 mouse_genomes_project 2 120454166 120455025 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007063.1 MGP_WSBEiJ_G0005795.1 mouse_genomes_project 2 28620700 28624964 + Gm14487 lincRNA lincRNA MGP_WSBEiJ_T0051746.1 MGP_WSBEiJ_G0024646.1 mouse_genomes_project 2 16598875 16600328 + MGP_WSBEiJ_P0051746 4930426L09Rik protein_coding protein_coding MGP_WSBEiJ_T0055530.1 MGP_WSBEiJ_G0025485.1 mouse_genomes_project 2 107392628 107431631 - Dnajc24 protein_coding processed_transcript MGP_WSBEiJ_T0055531.1 MGP_WSBEiJ_G0025485.1 mouse_genomes_project 2 107392808 107431712 - MGP_WSBEiJ_P0055531 Dnajc24 protein_coding protein_coding MGP_WSBEiJ_T0055532.1 MGP_WSBEiJ_G0025485.1 mouse_genomes_project 2 107392856 107431570 - Dnajc24 protein_coding processed_transcript MGP_WSBEiJ_T0055533.1 MGP_WSBEiJ_G0025485.1 mouse_genomes_project 2 107396277 107430446 - Dnajc24 protein_coding processed_transcript MGP_WSBEiJ_T0017200.1 MGP_WSBEiJ_G0014852.1 mouse_genomes_project 2 75729579 75734677 + Gm13657 processed_transcript processed_transcript MGP_WSBEiJ_T0003879.1 MGP_WSBEiJ_G0003464.1 mouse_genomes_project 2 31972839 31974242 + C130021I20Rik antisense antisense MGP_WSBEiJ_T0003880.1 MGP_WSBEiJ_G0003464.1 mouse_genomes_project 2 31972977 31978004 + C130021I20Rik antisense antisense MGP_WSBEiJ_T0017250.1 MGP_WSBEiJ_G0014878.1 mouse_genomes_project 2 116417027 116461568 + Gm13972 processed_transcript processed_transcript MGP_WSBEiJ_T0054390.1 MGP_WSBEiJ_G0025128.1 mouse_genomes_project 2 76382729 76384156 + Osbpl6 protein_coding processed_transcript MGP_WSBEiJ_T0054391.1 MGP_WSBEiJ_G0025128.1 mouse_genomes_project 2 76382759 76583797 + MGP_WSBEiJ_P0054391 Osbpl6 protein_coding protein_coding MGP_WSBEiJ_T0054392.1 MGP_WSBEiJ_G0025128.1 mouse_genomes_project 2 76382759 76583801 + MGP_WSBEiJ_P0054392 Osbpl6 protein_coding protein_coding MGP_WSBEiJ_T0054393.1 MGP_WSBEiJ_G0025128.1 mouse_genomes_project 2 76382779 76579746 + MGP_WSBEiJ_P0054393 Osbpl6 protein_coding protein_coding MGP_WSBEiJ_T0054394.1 MGP_WSBEiJ_G0025128.1 mouse_genomes_project 2 76382782 76383689 + Osbpl6 protein_coding processed_transcript MGP_WSBEiJ_T0054395.1 MGP_WSBEiJ_G0025128.1 mouse_genomes_project 2 76476989 76523130 + Osbpl6 protein_coding processed_transcript MGP_WSBEiJ_T0054396.1 MGP_WSBEiJ_G0025128.1 mouse_genomes_project 2 76529962 76579179 + MGP_WSBEiJ_P0054396 Osbpl6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054397.1 MGP_WSBEiJ_G0025128.1 mouse_genomes_project 2 76549539 76563458 + Osbpl6 protein_coding processed_transcript MGP_WSBEiJ_T0011319.1 MGP_WSBEiJ_G0009476.1 mouse_genomes_project 2 160115624 160115840 + Gm22316 misc_RNA misc_RNA MGP_WSBEiJ_T0057114.1 MGP_WSBEiJ_G0025870.1 mouse_genomes_project 2 152113331 152120170 + MGP_WSBEiJ_P0057114 Cst8 protein_coding protein_coding MGP_WSBEiJ_T0057115.1 MGP_WSBEiJ_G0025870.1 mouse_genomes_project 2 152113380 152120170 + MGP_WSBEiJ_P0057115 Cst8 protein_coding protein_coding MGP_WSBEiJ_T0057116.1 MGP_WSBEiJ_G0025870.1 mouse_genomes_project 2 152113449 152120170 + Cst8 protein_coding processed_transcript MGP_WSBEiJ_T0053172.1 MGP_WSBEiJ_G0024886.1 mouse_genomes_project 2 31043322 31062800 - MGP_WSBEiJ_P0053172 Ttc16 protein_coding protein_coding MGP_WSBEiJ_T0053181.1 MGP_WSBEiJ_G0024886.1 mouse_genomes_project 2 31049423 31063001 - MGP_WSBEiJ_P0053181 Ttc16 protein_coding protein_coding MGP_WSBEiJ_T0053182.1 MGP_WSBEiJ_G0024886.1 mouse_genomes_project 2 31049586 31062854 - MGP_WSBEiJ_P0053182 Ttc16 protein_coding protein_coding MGP_WSBEiJ_T0053183.1 MGP_WSBEiJ_G0024886.1 mouse_genomes_project 2 31051376 31063050 - MGP_WSBEiJ_P0053183 Ttc16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053184.1 MGP_WSBEiJ_G0024886.1 mouse_genomes_project 2 31060014 31063004 - Ttc16 protein_coding retained_intron MGP_WSBEiJ_T0053185.1 MGP_WSBEiJ_G0024886.1 mouse_genomes_project 2 31061926 31063048 - MGP_WSBEiJ_P0053185 Ttc16 protein_coding protein_coding MGP_WSBEiJ_T0057128.1 MGP_WSBEiJ_G0025877.1 mouse_genomes_project 2 153178067 153178757 - MGP_WSBEiJ_P0057128 C530025M09Rik protein_coding protein_coding MGP_WSBEiJ_T0058475.1 MGP_WSBEiJ_G0026197.1 mouse_genomes_project 2 177369104 177379783 + MGP_WSBEiJ_P0058475 Tfap2c protein_coding unknown_likely_coding MGP_WSBEiJ_T0058476.1 MGP_WSBEiJ_G0026197.1 mouse_genomes_project 2 177370052 177382809 + MGP_WSBEiJ_P0058476 Tfap2c protein_coding protein_coding MGP_WSBEiJ_T0058062.1 MGP_WSBEiJ_G0026098.1 mouse_genomes_project 2 168530034 168542413 + Rbpjl protein_coding retained_intron MGP_WSBEiJ_T0058063.1 MGP_WSBEiJ_G0026098.1 mouse_genomes_project 2 168530087 168543070 + MGP_WSBEiJ_P0058063 Rbpjl protein_coding protein_coding MGP_WSBEiJ_T0058064.1 MGP_WSBEiJ_G0026098.1 mouse_genomes_project 2 168530102 168539096 + Rbpjl protein_coding processed_transcript MGP_WSBEiJ_T0007197.1 MGP_WSBEiJ_G0005904.1 mouse_genomes_project 2 118793733 118807450 + D330050G23Rik lincRNA lincRNA MGP_WSBEiJ_T0007198.1 MGP_WSBEiJ_G0005904.1 mouse_genomes_project 2 118793756 118807285 + D330050G23Rik lincRNA lincRNA MGP_WSBEiJ_T0007199.1 MGP_WSBEiJ_G0005904.1 mouse_genomes_project 2 118793775 118799283 + D330050G23Rik lincRNA lincRNA MGP_WSBEiJ_T0056195.1 MGP_WSBEiJ_G0025647.1 mouse_genomes_project 2 123639221 123653867 - MGP_WSBEiJ_P0056195 protein_coding protein_coding MGP_WSBEiJ_T0054224.1 MGP_WSBEiJ_G0025087.1 mouse_genomes_project 2 71189665 71265926 + MGP_WSBEiJ_P0054224 Metap1d protein_coding protein_coding MGP_WSBEiJ_T0054225.1 MGP_WSBEiJ_G0025087.1 mouse_genomes_project 2 71189722 71256690 + Metap1d protein_coding processed_transcript MGP_WSBEiJ_T0054226.1 MGP_WSBEiJ_G0025087.1 mouse_genomes_project 2 71189740 71265929 + Metap1d protein_coding processed_transcript MGP_WSBEiJ_T0054227.1 MGP_WSBEiJ_G0025087.1 mouse_genomes_project 2 71189752 71265516 + Metap1d protein_coding processed_transcript MGP_WSBEiJ_T0054228.1 MGP_WSBEiJ_G0025087.1 mouse_genomes_project 2 71251014 71257888 + Metap1d protein_coding processed_transcript MGP_WSBEiJ_T0054229.1 MGP_WSBEiJ_G0025087.1 mouse_genomes_project 2 71256146 71257019 + Metap1d protein_coding processed_transcript MGP_WSBEiJ_T0058751.1 MGP_WSBEiJ_G0026264.1 mouse_genomes_project 2 186456408 186497212 - MGP_WSBEiJ_P0058751 Gmeb2 protein_coding protein_coding MGP_WSBEiJ_T0058752.1 MGP_WSBEiJ_G0026264.1 mouse_genomes_project 2 186458744 186485641 - MGP_WSBEiJ_P0058752 Gmeb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058753.1 MGP_WSBEiJ_G0026264.1 mouse_genomes_project 2 186459734 186461091 - Gmeb2 protein_coding retained_intron MGP_WSBEiJ_T0058754.1 MGP_WSBEiJ_G0026264.1 mouse_genomes_project 2 186460877 186496554 - MGP_WSBEiJ_P0058754 Gmeb2 protein_coding protein_coding MGP_WSBEiJ_T0058755.1 MGP_WSBEiJ_G0026264.1 mouse_genomes_project 2 186460897 186497193 - MGP_WSBEiJ_P0058755 Gmeb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013160.1 MGP_WSBEiJ_G0011290.1 mouse_genomes_project 2 38056144 38056737 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013472.1 MGP_WSBEiJ_G0011602.1 mouse_genomes_project 2 160598398 160607853 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007166.1 MGP_WSBEiJ_G0005879.1 mouse_genomes_project 2 97929233 98027279 - 4930445B16Rik lincRNA lincRNA MGP_WSBEiJ_T0052335.1 MGP_WSBEiJ_G0024755.1 mouse_genomes_project 2 24254468 24291110 - MGP_WSBEiJ_P0052335 Sec16a protein_coding protein_coding MGP_WSBEiJ_T0052336.1 MGP_WSBEiJ_G0024755.1 mouse_genomes_project 2 24254468 24274465 - MGP_WSBEiJ_P0052336 Sec16a protein_coding protein_coding MGP_WSBEiJ_T0052337.1 MGP_WSBEiJ_G0024755.1 mouse_genomes_project 2 24254470 24291112 - MGP_WSBEiJ_P0052337 Sec16a protein_coding protein_coding MGP_WSBEiJ_T0052338.1 MGP_WSBEiJ_G0024755.1 mouse_genomes_project 2 24255325 24258087 - Sec16a protein_coding processed_transcript MGP_WSBEiJ_T0052339.1 MGP_WSBEiJ_G0024755.1 mouse_genomes_project 2 24255755 24261264 - Sec16a protein_coding processed_transcript MGP_WSBEiJ_T0052340.1 MGP_WSBEiJ_G0024755.1 mouse_genomes_project 2 24259412 24264756 - Sec16a protein_coding processed_transcript MGP_WSBEiJ_T0052341.1 MGP_WSBEiJ_G0024755.1 mouse_genomes_project 2 24280932 24285650 - MGP_WSBEiJ_P0052341 Sec16a protein_coding protein_coding MGP_WSBEiJ_T0052342.1 MGP_WSBEiJ_G0024755.1 mouse_genomes_project 2 24287858 24291096 - Sec16a protein_coding processed_transcript MGP_WSBEiJ_T0051310.1 MGP_WSBEiJ_G0024577.1 mouse_genomes_project 2 488116 499387 + Cdnf protein_coding processed_transcript MGP_WSBEiJ_T0051311.1 MGP_WSBEiJ_G0024577.1 mouse_genomes_project 2 488151 501941 + MGP_WSBEiJ_P0051311 Cdnf protein_coding protein_coding MGP_WSBEiJ_T0051312.1 MGP_WSBEiJ_G0024577.1 mouse_genomes_project 2 488970 499465 + Cdnf protein_coding processed_transcript MGP_WSBEiJ_T0051857.1 MGP_WSBEiJ_G0024667.1 mouse_genomes_project 2 21165264 21228575 - MGP_WSBEiJ_P0051857 Spopl protein_coding protein_coding MGP_WSBEiJ_T0051858.1 MGP_WSBEiJ_G0024667.1 mouse_genomes_project 2 21171973 21228549 - MGP_WSBEiJ_P0051858 Spopl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051859.1 MGP_WSBEiJ_G0024667.1 mouse_genomes_project 2 21172569 21228449 - MGP_WSBEiJ_P0051859 Spopl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051860.1 MGP_WSBEiJ_G0024667.1 mouse_genomes_project 2 21172831 21176949 - Spopl protein_coding retained_intron MGP_WSBEiJ_T0051861.1 MGP_WSBEiJ_G0024667.1 mouse_genomes_project 2 21179521 21195145 - Spopl protein_coding retained_intron MGP_WSBEiJ_T0051862.1 MGP_WSBEiJ_G0024667.1 mouse_genomes_project 2 21200898 21228577 - MGP_WSBEiJ_P0051862 Spopl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054788.1 MGP_WSBEiJ_G0025278.1 mouse_genomes_project 2 88230589 88382452 - MGP_WSBEiJ_P0054788 protein_coding protein_coding MGP_WSBEiJ_T0056624.1 MGP_WSBEiJ_G0025755.1 mouse_genomes_project 2 133026638 133029661 + MGP_WSBEiJ_P0056624 Gm28372 protein_coding protein_coding MGP_WSBEiJ_T0053606.1 MGP_WSBEiJ_G0024980.1 mouse_genomes_project 2 42376328 43048107 + MGP_WSBEiJ_P0053606 Arhgap15 protein_coding protein_coding MGP_WSBEiJ_T0053607.1 MGP_WSBEiJ_G0024980.1 mouse_genomes_project 2 42376338 43039583 + MGP_WSBEiJ_P0053607 Arhgap15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053608.1 MGP_WSBEiJ_G0024980.1 mouse_genomes_project 2 42376373 42533410 + Arhgap15 protein_coding processed_transcript MGP_WSBEiJ_T0053609.1 MGP_WSBEiJ_G0024980.1 mouse_genomes_project 2 42376374 43039587 + MGP_WSBEiJ_P0053609 Arhgap15 protein_coding protein_coding MGP_WSBEiJ_T0053610.1 MGP_WSBEiJ_G0024980.1 mouse_genomes_project 2 42715108 42800156 + Arhgap15 protein_coding processed_transcript MGP_WSBEiJ_T0058592.1 MGP_WSBEiJ_G0026230.1 mouse_genomes_project 2 185157796 185158808 - Psma7 protein_coding retained_intron MGP_WSBEiJ_T0058593.1 MGP_WSBEiJ_G0026230.1 mouse_genomes_project 2 185157797 185163853 - Psma7 protein_coding retained_intron MGP_WSBEiJ_T0058594.1 MGP_WSBEiJ_G0026230.1 mouse_genomes_project 2 185157797 185163891 - MGP_WSBEiJ_P0058594 Psma7 protein_coding protein_coding MGP_WSBEiJ_T0058595.1 MGP_WSBEiJ_G0026230.1 mouse_genomes_project 2 185158242 185158912 - Psma7 protein_coding retained_intron MGP_WSBEiJ_T0058596.1 MGP_WSBEiJ_G0026230.1 mouse_genomes_project 2 185159057 185160245 - Psma7 protein_coding retained_intron MGP_WSBEiJ_T0058597.1 MGP_WSBEiJ_G0026230.1 mouse_genomes_project 2 185159492 185161569 - Psma7 protein_coding retained_intron MGP_WSBEiJ_T0058598.1 MGP_WSBEiJ_G0026230.1 mouse_genomes_project 2 185160719 185163843 - Psma7 protein_coding processed_transcript MGP_WSBEiJ_T0013122.1 MGP_WSBEiJ_G0011252.1 mouse_genomes_project 2 22379135 22379781 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058678.1 MGP_WSBEiJ_G0026250.1 mouse_genomes_project 2 185951515 185954035 - MGP_WSBEiJ_P0058678 Bhlhe23 protein_coding protein_coding MGP_WSBEiJ_T0100701.1 MGP_WSBEiJ_G0039159.1 mouse_genomes_project 2 86076099 86077039 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0054833.1 MGP_WSBEiJ_G0025319.1 mouse_genomes_project 2 89536161 89537094 - MGP_WSBEiJ_P0054833 Olfr1199 protein_coding protein_coding MGP_WSBEiJ_T0052048.1 MGP_WSBEiJ_G0024701.1 mouse_genomes_project 2 23010884 23027219 + MGP_WSBEiJ_P0052048 Anapc2 protein_coding protein_coding MGP_WSBEiJ_T0052049.1 MGP_WSBEiJ_G0024701.1 mouse_genomes_project 2 23010989 23014766 + Anapc2 protein_coding processed_transcript MGP_WSBEiJ_T0052050.1 MGP_WSBEiJ_G0024701.1 mouse_genomes_project 2 23011872 23016800 + MGP_WSBEiJ_P0052050 Anapc2 protein_coding protein_coding MGP_WSBEiJ_T0052051.1 MGP_WSBEiJ_G0024701.1 mouse_genomes_project 2 23017387 23018848 + Anapc2 protein_coding processed_transcript MGP_WSBEiJ_T0057104.1 MGP_WSBEiJ_G0025865.1 mouse_genomes_project 2 152008021 152048215 - MGP_WSBEiJ_P0057104 Napb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057105.1 MGP_WSBEiJ_G0025865.1 mouse_genomes_project 2 152008021 152048269 - MGP_WSBEiJ_P0057105 Napb protein_coding protein_coding MGP_WSBEiJ_T0057106.1 MGP_WSBEiJ_G0025865.1 mouse_genomes_project 2 152020417 152048193 - Napb protein_coding retained_intron MGP_WSBEiJ_T0013117.1 MGP_WSBEiJ_G0011247.1 mouse_genomes_project 2 21167931 21168355 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051733.1 MGP_WSBEiJ_G0024643.1 mouse_genomes_project 2 16261720 16269468 + MGP_WSBEiJ_P0051733 Bmi1 protein_coding protein_coding MGP_WSBEiJ_T0051734.1 MGP_WSBEiJ_G0024643.1 mouse_genomes_project 2 16261898 16266925 + Bmi1 protein_coding processed_transcript MGP_WSBEiJ_T0051735.1 MGP_WSBEiJ_G0024643.1 mouse_genomes_project 2 16262385 16268235 + MGP_WSBEiJ_P0051735 Bmi1 protein_coding protein_coding MGP_WSBEiJ_T0051736.1 MGP_WSBEiJ_G0024643.1 mouse_genomes_project 2 16264948 16268571 + MGP_WSBEiJ_P0051736 Bmi1 protein_coding protein_coding MGP_WSBEiJ_T0051737.1 MGP_WSBEiJ_G0024643.1 mouse_genomes_project 2 16265553 16267589 + MGP_WSBEiJ_P0051737 Bmi1 protein_coding protein_coding MGP_WSBEiJ_T0051738.1 MGP_WSBEiJ_G0024643.1 mouse_genomes_project 2 16265666 16267415 + MGP_WSBEiJ_P0051738 Bmi1 protein_coding protein_coding MGP_WSBEiJ_T0058631.1 MGP_WSBEiJ_G0026238.1 mouse_genomes_project 2 185388261 185404506 - MGP_WSBEiJ_P0058631 Cables2 protein_coding protein_coding MGP_WSBEiJ_T0058632.1 MGP_WSBEiJ_G0026238.1 mouse_genomes_project 2 185388264 185404062 - Cables2 protein_coding retained_intron MGP_WSBEiJ_T0058633.1 MGP_WSBEiJ_G0026238.1 mouse_genomes_project 2 185391000 185392365 - Cables2 protein_coding retained_intron MGP_WSBEiJ_T0058634.1 MGP_WSBEiJ_G0026238.1 mouse_genomes_project 2 185392731 185418204 - Cables2 protein_coding retained_intron MGP_WSBEiJ_T0058635.1 MGP_WSBEiJ_G0026238.1 mouse_genomes_project 2 185393454 185404045 - Cables2 protein_coding retained_intron MGP_WSBEiJ_T0011310.1 MGP_WSBEiJ_G0009467.1 mouse_genomes_project 2 116020887 116021205 + Gm25103 misc_RNA misc_RNA MGP_WSBEiJ_T0058513.1 MGP_WSBEiJ_G0026209.1 mouse_genomes_project 2 178614231 178619546 + MGP_WSBEiJ_P0058513 1700010B08Rik protein_coding protein_coding MGP_WSBEiJ_T0013365.1 MGP_WSBEiJ_G0011495.1 mouse_genomes_project 2 114119238 114122504 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013304.1 MGP_WSBEiJ_G0011434.1 mouse_genomes_project 2 92284955 92285260 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051670.1 MGP_WSBEiJ_G0024633.1 mouse_genomes_project 2 13031587 13802519 + MGP_WSBEiJ_P0051670 protein_coding protein_coding MGP_WSBEiJ_T0054385.1 MGP_WSBEiJ_G0025125.1 mouse_genomes_project 2 75959773 75976626 - MGP_WSBEiJ_P0054385 Pde11a protein_coding protein_coding MGP_WSBEiJ_T0054386.1 MGP_WSBEiJ_G0025125.1 mouse_genomes_project 2 75960527 76315643 - MGP_WSBEiJ_P0054386 Pde11a protein_coding protein_coding MGP_WSBEiJ_T0054387.1 MGP_WSBEiJ_G0025125.1 mouse_genomes_project 2 75999758 76188978 - MGP_WSBEiJ_P0054387 Pde11a protein_coding protein_coding MGP_WSBEiJ_T0017166.1 MGP_WSBEiJ_G0014829.1 mouse_genomes_project 2 27759151 27761485 - processed_transcript processed_transcript MGP_WSBEiJ_T0057765.1 MGP_WSBEiJ_G0026023.1 mouse_genomes_project 2 160787432 160856853 - MGP_WSBEiJ_P0057765 Soga1 protein_coding protein_coding MGP_WSBEiJ_T0057766.1 MGP_WSBEiJ_G0026023.1 mouse_genomes_project 2 160792495 160799099 - Soga1 protein_coding processed_transcript MGP_WSBEiJ_T0057767.1 MGP_WSBEiJ_G0026023.1 mouse_genomes_project 2 160813949 160817119 - Soga1 protein_coding processed_transcript MGP_WSBEiJ_T0013392.1 MGP_WSBEiJ_G0011522.1 mouse_genomes_project 2 132706599 132707919 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052760.1 MGP_WSBEiJ_G0024827.1 mouse_genomes_project 2 28336733 28357734 + MGP_WSBEiJ_P0052760 Gm28038 protein_coding protein_coding MGP_WSBEiJ_T0010261.1 MGP_WSBEiJ_G0008418.1 mouse_genomes_project 2 77074706 77074788 - Gm44360 miRNA miRNA MGP_WSBEiJ_T0054756.1 MGP_WSBEiJ_G0025254.1 mouse_genomes_project 2 87597967 87598942 + MGP_WSBEiJ_P0054756 Olfr1102 protein_coding protein_coding MGP_WSBEiJ_T0057854.1 MGP_WSBEiJ_G0026041.1 mouse_genomes_project 2 162161113 162175576 + Lbp protein_coding processed_transcript MGP_WSBEiJ_T0057855.1 MGP_WSBEiJ_G0026041.1 mouse_genomes_project 2 162161113 162165125 + MGP_WSBEiJ_P0057855 Lbp protein_coding protein_coding MGP_WSBEiJ_T0057856.1 MGP_WSBEiJ_G0026041.1 mouse_genomes_project 2 162161113 162187432 + MGP_WSBEiJ_P0057856 Lbp protein_coding protein_coding MGP_WSBEiJ_T0057857.1 MGP_WSBEiJ_G0026041.1 mouse_genomes_project 2 162161232 162173231 + Lbp protein_coding retained_intron MGP_WSBEiJ_T0057858.1 MGP_WSBEiJ_G0026041.1 mouse_genomes_project 2 162168824 162179291 + MGP_WSBEiJ_P0057858 Lbp protein_coding protein_coding MGP_WSBEiJ_T0054853.1 MGP_WSBEiJ_G0025337.1 mouse_genomes_project 2 89973306 89974242 - MGP_WSBEiJ_P0054853 Olfr1222 protein_coding protein_coding MGP_WSBEiJ_T0054854.1 MGP_WSBEiJ_G0025337.1 mouse_genomes_project 2 89973591 89974244 - MGP_WSBEiJ_P0054854 Olfr1222 protein_coding protein_coding MGP_WSBEiJ_T0051925.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22645200 22655468 - MGP_WSBEiJ_P0051925 Arrdc1 protein_coding protein_coding MGP_WSBEiJ_T0051926.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22645200 22655379 - MGP_WSBEiJ_P0051926 Arrdc1 protein_coding protein_coding MGP_WSBEiJ_T0051927.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22645203 22655361 - Arrdc1 protein_coding retained_intron MGP_WSBEiJ_T0051928.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22645837 22655383 - MGP_WSBEiJ_P0051928 Arrdc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051929.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22645903 22655361 - Arrdc1 protein_coding retained_intron MGP_WSBEiJ_T0051930.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22646006 22655358 - MGP_WSBEiJ_P0051930 Arrdc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051931.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22646031 22647049 - Arrdc1 protein_coding retained_intron MGP_WSBEiJ_T0051932.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22646171 22655390 - MGP_WSBEiJ_P0051932 Arrdc1 protein_coding protein_coding MGP_WSBEiJ_T0051933.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22646520 22647752 - Arrdc1 protein_coding retained_intron MGP_WSBEiJ_T0051934.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22646760 22655270 - MGP_WSBEiJ_P0051934 Arrdc1 protein_coding protein_coding MGP_WSBEiJ_T0051935.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22646843 22647980 - Arrdc1 protein_coding processed_transcript MGP_WSBEiJ_T0051936.1 MGP_WSBEiJ_G0024679.1 mouse_genomes_project 2 22647132 22655404 - Arrdc1 protein_coding retained_intron MGP_WSBEiJ_T0054889.1 MGP_WSBEiJ_G0025364.1 mouse_genomes_project 2 90600847 90606638 - MGP_WSBEiJ_P0054889 Olfr1254 protein_coding protein_coding MGP_WSBEiJ_T0054890.1 MGP_WSBEiJ_G0025364.1 mouse_genomes_project 2 90600847 90601792 - MGP_WSBEiJ_P0054890 Olfr1254 protein_coding protein_coding MGP_WSBEiJ_T0013383.1 MGP_WSBEiJ_G0011513.1 mouse_genomes_project 2 129318815 129319641 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003887.1 MGP_WSBEiJ_G0003469.1 mouse_genomes_project 2 36736333 36738318 + Gm13556 antisense antisense MGP_WSBEiJ_T0013486.1 MGP_WSBEiJ_G0011616.1 mouse_genomes_project 2 166947320 166948010 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004040.1 MGP_WSBEiJ_G0003577.1 mouse_genomes_project 2 154979942 154981560 - Gm14167 antisense antisense MGP_WSBEiJ_T0054725.1 MGP_WSBEiJ_G0025225.1 mouse_genomes_project 2 86822517 86823456 + MGP_WSBEiJ_P0054725 Olfr1052 protein_coding protein_coding MGP_WSBEiJ_T0058232.1 MGP_WSBEiJ_G0026142.1 mouse_genomes_project 2 169624066 169630729 - MGP_WSBEiJ_P0058232 Ocstamp protein_coding protein_coding MGP_WSBEiJ_T0053470.1 MGP_WSBEiJ_G0024954.1 mouse_genomes_project 2 35659520 35660450 + MGP_WSBEiJ_P0053470 Olfr366 protein_coding protein_coding MGP_WSBEiJ_T0054383.1 MGP_WSBEiJ_G0025123.1 mouse_genomes_project 2 75897732 75900976 - MGP_WSBEiJ_P0054383 protein_coding protein_coding MGP_WSBEiJ_T0057558.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159557830 159645890 - Uqcc1 protein_coding processed_transcript MGP_WSBEiJ_T0057559.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159557830 159645890 - MGP_WSBEiJ_P0057559 Uqcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057560.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159557832 159645873 - MGP_WSBEiJ_P0057560 Uqcc1 protein_coding protein_coding MGP_WSBEiJ_T0057561.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159557832 159645866 - MGP_WSBEiJ_P0057561 Uqcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057562.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159557857 159646140 - MGP_WSBEiJ_P0057562 Uqcc1 protein_coding protein_coding MGP_WSBEiJ_T0057563.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159558873 159645848 - MGP_WSBEiJ_P0057563 Uqcc1 protein_coding protein_coding MGP_WSBEiJ_T0057564.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159559110 159562626 - Uqcc1 protein_coding processed_transcript MGP_WSBEiJ_T0057565.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159559167 159645874 - MGP_WSBEiJ_P0057565 Uqcc1 protein_coding protein_coding MGP_WSBEiJ_T0057566.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159559186 159646140 - MGP_WSBEiJ_P0057566 Uqcc1 protein_coding protein_coding MGP_WSBEiJ_T0057567.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159559377 159645862 - MGP_WSBEiJ_P0057567 Uqcc1 protein_coding protein_coding MGP_WSBEiJ_T0057568.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159561836 159646093 - Uqcc1 protein_coding retained_intron MGP_WSBEiJ_T0057569.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159562300 159645873 - MGP_WSBEiJ_P0057569 Uqcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057570.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159569632 159645880 - Uqcc1 protein_coding retained_intron MGP_WSBEiJ_T0057571.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159582810 159645886 - Uqcc1 protein_coding processed_transcript MGP_WSBEiJ_T0057572.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159600855 159645890 - MGP_WSBEiJ_P0057572 Uqcc1 protein_coding protein_coding MGP_WSBEiJ_T0057573.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159600867 159626479 - Uqcc1 protein_coding retained_intron MGP_WSBEiJ_T0057574.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159600874 159646106 - Uqcc1 protein_coding processed_transcript MGP_WSBEiJ_T0057575.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159623847 159645876 - Uqcc1 protein_coding retained_intron MGP_WSBEiJ_T0057576.1 MGP_WSBEiJ_G0025996.1 mouse_genomes_project 2 159625238 159645880 - MGP_WSBEiJ_P0057576 Uqcc1 protein_coding protein_coding MGP_WSBEiJ_T0058107.1 MGP_WSBEiJ_G0026117.1 mouse_genomes_project 2 168893532 168896254 + MGP_WSBEiJ_P0058107 Spint5 protein_coding protein_coding MGP_WSBEiJ_T0058108.1 MGP_WSBEiJ_G0026117.1 mouse_genomes_project 2 168893532 168896254 + MGP_WSBEiJ_P0058108 Spint5 protein_coding protein_coding MGP_WSBEiJ_T0053693.1 MGP_WSBEiJ_G0024990.1 mouse_genomes_project 2 49152245 49169935 - Mmadhc protein_coding processed_transcript MGP_WSBEiJ_T0053694.1 MGP_WSBEiJ_G0024990.1 mouse_genomes_project 2 49152245 49169957 - MGP_WSBEiJ_P0053694 Mmadhc protein_coding protein_coding MGP_WSBEiJ_T0053695.1 MGP_WSBEiJ_G0024990.1 mouse_genomes_project 2 49152713 49169927 - Mmadhc protein_coding processed_transcript MGP_WSBEiJ_T0053696.1 MGP_WSBEiJ_G0024990.1 mouse_genomes_project 2 49153470 49169921 - MGP_WSBEiJ_P0053696 Mmadhc protein_coding protein_coding MGP_WSBEiJ_T0053697.1 MGP_WSBEiJ_G0024990.1 mouse_genomes_project 2 49153483 49169664 - Mmadhc protein_coding processed_transcript MGP_WSBEiJ_T0053698.1 MGP_WSBEiJ_G0024990.1 mouse_genomes_project 2 49153495 49162450 - Mmadhc protein_coding processed_transcript MGP_WSBEiJ_T0053699.1 MGP_WSBEiJ_G0024990.1 mouse_genomes_project 2 49161103 49169916 - Mmadhc protein_coding processed_transcript MGP_WSBEiJ_T0053700.1 MGP_WSBEiJ_G0024990.1 mouse_genomes_project 2 49161116 49170041 - MGP_WSBEiJ_P0053700 Mmadhc protein_coding protein_coding MGP_WSBEiJ_T0010293.1 MGP_WSBEiJ_G0008450.1 mouse_genomes_project 2 136321527 136321614 + Mir3090 miRNA miRNA MGP_WSBEiJ_T0056645.1 MGP_WSBEiJ_G0025760.1 mouse_genomes_project 2 133073619 133179770 + MGP_WSBEiJ_P0056645 Ptpra protein_coding protein_coding MGP_WSBEiJ_T0056646.1 MGP_WSBEiJ_G0025760.1 mouse_genomes_project 2 133073885 133179767 + MGP_WSBEiJ_P0056646 Ptpra protein_coding protein_coding MGP_WSBEiJ_T0056647.1 MGP_WSBEiJ_G0025760.1 mouse_genomes_project 2 133128877 133184499 + MGP_WSBEiJ_P0056647 Ptpra protein_coding unknown_likely_coding MGP_WSBEiJ_T0054759.1 MGP_WSBEiJ_G0025257.1 mouse_genomes_project 2 87651709 87652648 - MGP_WSBEiJ_P0054759 Olfr1106 protein_coding protein_coding MGP_WSBEiJ_T0013232.1 MGP_WSBEiJ_G0011362.1 mouse_genomes_project 2 68394712 68395102 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004085.1 MGP_WSBEiJ_G0003612.1 mouse_genomes_project 2 169675640 169683762 + Gm14437 antisense antisense MGP_WSBEiJ_T0001023.1 MGP_WSBEiJ_G0000958.1 mouse_genomes_project 2 12546638 12549396 + TEC TEC MGP_WSBEiJ_T0054812.1 MGP_WSBEiJ_G0025300.1 mouse_genomes_project 2 88714385 88715327 - MGP_WSBEiJ_P0054812 Olfr73 protein_coding protein_coding MGP_WSBEiJ_T0003935.1 MGP_WSBEiJ_G0003506.1 mouse_genomes_project 2 73535343 73537339 + Chn1os1 antisense antisense MGP_WSBEiJ_T0056843.1 MGP_WSBEiJ_G0025801.1 mouse_genomes_project 2 135546732 135573969 + MGP_WSBEiJ_P0056843 Mcm8 protein_coding protein_coding MGP_WSBEiJ_T0056844.1 MGP_WSBEiJ_G0025801.1 mouse_genomes_project 2 135546732 135573667 + MGP_WSBEiJ_P0056844 Mcm8 protein_coding protein_coding MGP_WSBEiJ_T0056845.1 MGP_WSBEiJ_G0025801.1 mouse_genomes_project 2 135546815 135548617 + Mcm8 protein_coding processed_transcript MGP_WSBEiJ_T0056856.1 MGP_WSBEiJ_G0025805.1 mouse_genomes_project 2 136306373 136319704 + MGP_WSBEiJ_P0056856 Bmp2 protein_coding protein_coding MGP_WSBEiJ_T0013283.1 MGP_WSBEiJ_G0011413.1 mouse_genomes_project 2 85693466 85693687 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056014.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122649464 122683306 + MGP_WSBEiJ_P0056014 Snap23 protein_coding protein_coding MGP_WSBEiJ_T0056015.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122649484 122683306 + MGP_WSBEiJ_P0056015 Snap23 protein_coding protein_coding MGP_WSBEiJ_T0056016.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122649490 122683306 + MGP_WSBEiJ_P0056016 Snap23 protein_coding protein_coding MGP_WSBEiJ_T0056017.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122649514 122678813 + MGP_WSBEiJ_P0056017 Snap23 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056018.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122649516 122667182 + Snap23 protein_coding retained_intron MGP_WSBEiJ_T0056019.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122649516 122668505 + MGP_WSBEiJ_P0056019 Snap23 protein_coding protein_coding MGP_WSBEiJ_T0056020.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122649531 122678726 + MGP_WSBEiJ_P0056020 Snap23 protein_coding protein_coding MGP_WSBEiJ_T0056021.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122668478 122677445 + Snap23 protein_coding retained_intron MGP_WSBEiJ_T0056022.1 MGP_WSBEiJ_G0025620.1 mouse_genomes_project 2 122672522 122678808 + Snap23 protein_coding processed_transcript MGP_WSBEiJ_T0054858.1 MGP_WSBEiJ_G0025341.1 mouse_genomes_project 2 90051588 90052521 - MGP_WSBEiJ_P0054858 Olfr1226 protein_coding protein_coding MGP_WSBEiJ_T0013127.1 MGP_WSBEiJ_G0011257.1 mouse_genomes_project 2 24582915 24583609 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058099.1 MGP_WSBEiJ_G0026111.1 mouse_genomes_project 2 168804063 168808146 - MGP_WSBEiJ_P0058099 Wfdc16 protein_coding protein_coding MGP_WSBEiJ_T0053468.1 MGP_WSBEiJ_G0024952.1 mouse_genomes_project 2 35578072 35585766 + MGP_WSBEiJ_P0053468 protein_coding protein_coding MGP_WSBEiJ_T0007228.1 MGP_WSBEiJ_G0005928.1 mouse_genomes_project 2 138495243 138500506 + lincRNA lincRNA MGP_WSBEiJ_T0013290.1 MGP_WSBEiJ_G0011420.1 mouse_genomes_project 2 87882879 87883549 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013502.1 MGP_WSBEiJ_G0011632.1 mouse_genomes_project 2 176867525 176868140 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099342.1 MGP_WSBEiJ_G0038005.1 mouse_genomes_project 2 30945187 30945324 + Gm26236 snoRNA snoRNA MGP_WSBEiJ_T0100255.1 MGP_WSBEiJ_G0038787.1 mouse_genomes_project 2 37143768 37163167 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0099400.1 MGP_WSBEiJ_G0038063.1 mouse_genomes_project 2 162220614 162220746 - Gm23925 snoRNA snoRNA MGP_WSBEiJ_T0052296.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24206561 24224433 - MGP_WSBEiJ_P0052296 Snapc4 protein_coding protein_coding MGP_WSBEiJ_T0052297.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24206563 24208821 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052298.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24206570 24224437 - MGP_WSBEiJ_P0052298 Snapc4 protein_coding protein_coding MGP_WSBEiJ_T0052299.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24206572 24224416 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052300.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24210410 24211567 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052301.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24213253 24217465 - MGP_WSBEiJ_P0052301 Snapc4 protein_coding protein_coding MGP_WSBEiJ_T0052302.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24213282 24217445 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052303.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24213303 24214941 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052304.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24213780 24217962 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052305.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24214629 24217189 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052306.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24214629 24224419 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052307.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24217395 24218572 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052308.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24221472 24224437 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0052309.1 MGP_WSBEiJ_G0024751.1 mouse_genomes_project 2 24222177 24224410 - Snapc4 protein_coding processed_transcript MGP_WSBEiJ_T0098134.1 MGP_WSBEiJ_G0036797.1 mouse_genomes_project 2 156679580 156679683 + Gm25643 snRNA snRNA MGP_WSBEiJ_T0010195.1 MGP_WSBEiJ_G0008352.1 mouse_genomes_project 2 7824952 7825061 + Mir297b miRNA miRNA MGP_WSBEiJ_T0055636.1 MGP_WSBEiJ_G0025538.1 mouse_genomes_project 2 113976641 114066228 + MGP_WSBEiJ_P0055636 protein_coding protein_coding MGP_WSBEiJ_T0055638.1 MGP_WSBEiJ_G0025538.1 mouse_genomes_project 2 113977558 114063107 + MGP_WSBEiJ_P0055638 protein_coding protein_coding MGP_WSBEiJ_T0055639.1 MGP_WSBEiJ_G0025538.1 mouse_genomes_project 2 113977635 114070262 + MGP_WSBEiJ_P0055639 protein_coding protein_coding MGP_WSBEiJ_T0055640.1 MGP_WSBEiJ_G0025538.1 mouse_genomes_project 2 113996931 114070262 + MGP_WSBEiJ_P0055640 protein_coding protein_coding MGP_WSBEiJ_T0055641.1 MGP_WSBEiJ_G0025538.1 mouse_genomes_project 2 114054250 114058714 + protein_coding processed_transcript MGP_WSBEiJ_T0055642.1 MGP_WSBEiJ_G0025538.1 mouse_genomes_project 2 114059603 114061316 + protein_coding processed_transcript MGP_WSBEiJ_T0055643.1 MGP_WSBEiJ_G0025538.1 mouse_genomes_project 2 114061279 114063964 + protein_coding processed_transcript MGP_WSBEiJ_T0055644.1 MGP_WSBEiJ_G0025538.1 mouse_genomes_project 2 114063271 114070269 + protein_coding retained_intron MGP_WSBEiJ_T0054896.1 MGP_WSBEiJ_G0025368.1 mouse_genomes_project 2 90722534 90725948 + MGP_WSBEiJ_P0054896 Olfr1258 protein_coding protein_coding MGP_WSBEiJ_T0054897.1 MGP_WSBEiJ_G0025368.1 mouse_genomes_project 2 90725012 90725948 + MGP_WSBEiJ_P0054897 Olfr1258 protein_coding protein_coding MGP_WSBEiJ_T0017285.1 MGP_WSBEiJ_G0014894.1 mouse_genomes_project 2 133958413 133960164 + Gm14233 processed_transcript processed_transcript MGP_WSBEiJ_T0004111.1 MGP_WSBEiJ_G0003632.1 mouse_genomes_project 2 186798505 186805142 + Uckl1os antisense antisense MGP_WSBEiJ_T0004112.1 MGP_WSBEiJ_G0003632.1 mouse_genomes_project 2 186798510 186800714 + Uckl1os antisense antisense MGP_WSBEiJ_T0004113.1 MGP_WSBEiJ_G0003632.1 mouse_genomes_project 2 186798543 186800714 + Uckl1os antisense antisense MGP_WSBEiJ_T0004114.1 MGP_WSBEiJ_G0003632.1 mouse_genomes_project 2 186799514 186800998 + Uckl1os antisense antisense MGP_WSBEiJ_T0004115.1 MGP_WSBEiJ_G0003632.1 mouse_genomes_project 2 186799557 186802172 + Uckl1os antisense antisense MGP_WSBEiJ_T0004116.1 MGP_WSBEiJ_G0003632.1 mouse_genomes_project 2 186799623 186801231 + Uckl1os antisense antisense MGP_WSBEiJ_T0004117.1 MGP_WSBEiJ_G0003632.1 mouse_genomes_project 2 186802262 186805193 + Uckl1os antisense antisense MGP_WSBEiJ_T0053443.1 MGP_WSBEiJ_G0024929.1 mouse_genomes_project 2 34844072 34844993 + MGP_WSBEiJ_P0053443 Olfr338 protein_coding protein_coding MGP_WSBEiJ_T0056470.1 MGP_WSBEiJ_G0025716.1 mouse_genomes_project 2 130020925 130040667 - MGP_WSBEiJ_P0056470 Prom2 protein_coding protein_coding MGP_WSBEiJ_T0056471.1 MGP_WSBEiJ_G0025716.1 mouse_genomes_project 2 130021405 130040585 - MGP_WSBEiJ_P0056471 Prom2 protein_coding protein_coding MGP_WSBEiJ_T0056472.1 MGP_WSBEiJ_G0025716.1 mouse_genomes_project 2 130033963 130034395 - Prom2 protein_coding processed_transcript MGP_WSBEiJ_T0056473.1 MGP_WSBEiJ_G0025716.1 mouse_genomes_project 2 130039438 130040614 - Prom2 protein_coding retained_intron MGP_WSBEiJ_T0055391.1 MGP_WSBEiJ_G0025457.1 mouse_genomes_project 2 104749409 104781314 - MGP_WSBEiJ_P0055391 Cat protein_coding protein_coding MGP_WSBEiJ_T0055392.1 MGP_WSBEiJ_G0025457.1 mouse_genomes_project 2 104750155 104781279 - MGP_WSBEiJ_P0055392 Cat protein_coding protein_coding MGP_WSBEiJ_T0052706.1 MGP_WSBEiJ_G0024818.1 mouse_genomes_project 2 28131474 28133549 - Zdhhc12 protein_coding processed_transcript MGP_WSBEiJ_T0052707.1 MGP_WSBEiJ_G0024818.1 mouse_genomes_project 2 28131474 28134167 - MGP_WSBEiJ_P0052707 Zdhhc12 protein_coding protein_coding MGP_WSBEiJ_T0052708.1 MGP_WSBEiJ_G0024818.1 mouse_genomes_project 2 28131481 28134154 - MGP_WSBEiJ_P0052708 Zdhhc12 protein_coding protein_coding MGP_WSBEiJ_T0052709.1 MGP_WSBEiJ_G0024818.1 mouse_genomes_project 2 28131861 28134135 - Zdhhc12 protein_coding retained_intron MGP_WSBEiJ_T0099353.1 MGP_WSBEiJ_G0038016.1 mouse_genomes_project 2 52715727 52715836 - Gm23315 snoRNA snoRNA MGP_WSBEiJ_T0055618.1 MGP_WSBEiJ_G0025523.1 mouse_genomes_project 2 113479039 113479978 + MGP_WSBEiJ_P0055618 Olfr1301 protein_coding protein_coding MGP_WSBEiJ_T0013373.1 MGP_WSBEiJ_G0011503.1 mouse_genomes_project 2 121709453 121709839 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097321.1 MGP_WSBEiJ_G0035996.1 mouse_genomes_project 2 148518790 148562743 + Gm14093 sense_intronic sense_intronic MGP_WSBEiJ_T0013446.1 MGP_WSBEiJ_G0011576.1 mouse_genomes_project 2 153796611 153797006 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017197.1 MGP_WSBEiJ_G0014849.1 mouse_genomes_project 2 73246037 73280778 + D230022J07Rik processed_transcript processed_transcript MGP_WSBEiJ_T0053438.1 MGP_WSBEiJ_G0024928.1 mouse_genomes_project 2 34697330 34720891 + MGP_WSBEiJ_P0053438 Ptgs1 protein_coding protein_coding MGP_WSBEiJ_T0053439.1 MGP_WSBEiJ_G0024928.1 mouse_genomes_project 2 34697460 34706702 + Ptgs1 protein_coding processed_transcript MGP_WSBEiJ_T0053440.1 MGP_WSBEiJ_G0024928.1 mouse_genomes_project 2 34704887 34720888 + Ptgs1 protein_coding processed_transcript MGP_WSBEiJ_T0053441.1 MGP_WSBEiJ_G0024928.1 mouse_genomes_project 2 34709351 34710107 + Ptgs1 protein_coding retained_intron MGP_WSBEiJ_T0053442.1 MGP_WSBEiJ_G0024928.1 mouse_genomes_project 2 34711113 34713844 + Ptgs1 protein_coding retained_intron MGP_WSBEiJ_T0010254.1 MGP_WSBEiJ_G0008411.1 mouse_genomes_project 2 67195871 67195931 + Mir7224 miRNA miRNA MGP_WSBEiJ_T0056242.1 MGP_WSBEiJ_G0025662.1 mouse_genomes_project 2 124444286 124476751 + MGP_WSBEiJ_P0056242 Sord protein_coding protein_coding MGP_WSBEiJ_T0055041.1 MGP_WSBEiJ_G0025397.1 mouse_genomes_project 2 91909983 91923535 - Nr1h3 protein_coding retained_intron MGP_WSBEiJ_T0055042.1 MGP_WSBEiJ_G0025397.1 mouse_genomes_project 2 91909983 91923626 - MGP_WSBEiJ_P0055042 Nr1h3 protein_coding protein_coding MGP_WSBEiJ_T0055043.1 MGP_WSBEiJ_G0025397.1 mouse_genomes_project 2 91909983 91923545 - MGP_WSBEiJ_P0055043 Nr1h3 protein_coding protein_coding MGP_WSBEiJ_T0055044.1 MGP_WSBEiJ_G0025397.1 mouse_genomes_project 2 91910014 91923661 - MGP_WSBEiJ_P0055044 Nr1h3 protein_coding protein_coding MGP_WSBEiJ_T0055045.1 MGP_WSBEiJ_G0025397.1 mouse_genomes_project 2 91910014 91923395 - MGP_WSBEiJ_P0055045 Nr1h3 protein_coding protein_coding MGP_WSBEiJ_T0055046.1 MGP_WSBEiJ_G0025397.1 mouse_genomes_project 2 91910128 91921268 - Nr1h3 protein_coding retained_intron MGP_WSBEiJ_T0055047.1 MGP_WSBEiJ_G0025397.1 mouse_genomes_project 2 91918752 91919503 - Nr1h3 protein_coding retained_intron MGP_WSBEiJ_T0055048.1 MGP_WSBEiJ_G0025397.1 mouse_genomes_project 2 91920554 91933544 - Nr1h3 protein_coding processed_transcript MGP_WSBEiJ_T0013471.1 MGP_WSBEiJ_G0011601.1 mouse_genomes_project 2 160543326 160543918 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055830.1 MGP_WSBEiJ_G0025584.1 mouse_genomes_project 2 121166248 121171362 + MGP_WSBEiJ_P0055830 Gchfr protein_coding protein_coding MGP_WSBEiJ_T0052450.1 MGP_WSBEiJ_G0024775.1 mouse_genomes_project 2 24948098 24977625 + MGP_WSBEiJ_P0052450 Adamtsl2 protein_coding protein_coding MGP_WSBEiJ_T0052451.1 MGP_WSBEiJ_G0024775.1 mouse_genomes_project 2 24965927 24977619 + Adamtsl2 protein_coding retained_intron MGP_WSBEiJ_T0052452.1 MGP_WSBEiJ_G0024775.1 mouse_genomes_project 2 24966675 24967286 + Adamtsl2 protein_coding processed_transcript MGP_WSBEiJ_T0052453.1 MGP_WSBEiJ_G0024775.1 mouse_genomes_project 2 24972422 24976050 + Adamtsl2 protein_coding retained_intron MGP_WSBEiJ_T0052454.1 MGP_WSBEiJ_G0024775.1 mouse_genomes_project 2 24973298 24977625 + Adamtsl2 protein_coding retained_intron MGP_WSBEiJ_T0057779.1 MGP_WSBEiJ_G0026026.1 mouse_genomes_project 2 160928792 160992967 - MGP_WSBEiJ_P0057779 Rbl1 protein_coding protein_coding MGP_WSBEiJ_T0057780.1 MGP_WSBEiJ_G0026026.1 mouse_genomes_project 2 160950171 160992989 - Rbl1 protein_coding retained_intron MGP_WSBEiJ_T0057781.1 MGP_WSBEiJ_G0026026.1 mouse_genomes_project 2 160957968 160992981 - Rbl1 protein_coding retained_intron MGP_WSBEiJ_T0057782.1 MGP_WSBEiJ_G0026026.1 mouse_genomes_project 2 160975017 160979138 - Rbl1 protein_coding retained_intron MGP_WSBEiJ_T0013429.1 MGP_WSBEiJ_G0011559.1 mouse_genomes_project 2 148697338 148697802 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054840.1 MGP_WSBEiJ_G0025326.1 mouse_genomes_project 2 89752472 89753405 - MGP_WSBEiJ_P0054840 Olfr1209 protein_coding protein_coding MGP_WSBEiJ_T0003860.1 MGP_WSBEiJ_G0003447.1 mouse_genomes_project 2 26509000 26526057 + Gm13381 antisense antisense MGP_WSBEiJ_T0003861.1 MGP_WSBEiJ_G0003447.1 mouse_genomes_project 2 26509327 26526339 + Gm13381 antisense antisense MGP_WSBEiJ_T0100742.1 MGP_WSBEiJ_G0039200.1 mouse_genomes_project 2 142134148 142134377 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0056654.1 MGP_WSBEiJ_G0025765.1 mouse_genomes_project 2 133242533 133262316 - MGP_WSBEiJ_P0056654 Fastkd5 protein_coding protein_coding MGP_WSBEiJ_T0056655.1 MGP_WSBEiJ_G0025765.1 mouse_genomes_project 2 133242535 133262303 - MGP_WSBEiJ_P0056655 Fastkd5 protein_coding protein_coding MGP_WSBEiJ_T0058474.1 MGP_WSBEiJ_G0026196.1 mouse_genomes_project 2 177279269 177281081 + MGP_WSBEiJ_P0058474 Fam209 protein_coding protein_coding MGP_WSBEiJ_T0001012.1 MGP_WSBEiJ_G0000947.1 mouse_genomes_project 2 10630173 10631871 - TEC TEC MGP_WSBEiJ_T0054709.1 MGP_WSBEiJ_G0025209.1 mouse_genomes_project 2 86474661 86475618 + MGP_WSBEiJ_P0054709 Olfr1030 protein_coding protein_coding MGP_WSBEiJ_T0013466.1 MGP_WSBEiJ_G0011596.1 mouse_genomes_project 2 160053403 160055629 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055831.1 MGP_WSBEiJ_G0025585.1 mouse_genomes_project 2 121171471 121214869 - MGP_WSBEiJ_P0055831 Dnajc17 protein_coding protein_coding MGP_WSBEiJ_T0055833.1 MGP_WSBEiJ_G0025585.1 mouse_genomes_project 2 121178367 121182600 - Dnajc17 protein_coding processed_transcript MGP_WSBEiJ_T0055834.1 MGP_WSBEiJ_G0025585.1 mouse_genomes_project 2 121182637 121214856 - Dnajc17 protein_coding retained_intron MGP_WSBEiJ_T0053950.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61802926 61882196 - MGP_WSBEiJ_P0053950 Fap protein_coding protein_coding MGP_WSBEiJ_T0053951.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61803096 61882101 - Fap protein_coding processed_transcript MGP_WSBEiJ_T0053952.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61803106 61805398 - MGP_WSBEiJ_P0053952 Fap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053953.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61803167 61881972 - MGP_WSBEiJ_P0053953 Fap protein_coding protein_coding MGP_WSBEiJ_T0053954.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61803167 61881972 - MGP_WSBEiJ_P0053954 Fap protein_coding protein_coding MGP_WSBEiJ_T0053955.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61803167 61881972 - MGP_WSBEiJ_P0053955 Fap protein_coding protein_coding MGP_WSBEiJ_T0053956.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61830505 61868981 - Fap protein_coding retained_intron MGP_WSBEiJ_T0053957.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61838940 61882044 - Fap protein_coding retained_intron MGP_WSBEiJ_T0053958.1 MGP_WSBEiJ_G0025035.1 mouse_genomes_project 2 61852532 61881681 - MGP_WSBEiJ_P0053958 Fap protein_coding protein_coding MGP_WSBEiJ_T0052218.1 MGP_WSBEiJ_G0024731.1 mouse_genomes_project 2 23456315 23459680 + MGP_WSBEiJ_P0052218 Lcn10 protein_coding protein_coding MGP_WSBEiJ_T0055621.1 MGP_WSBEiJ_G0025526.1 mouse_genomes_project 2 113587113 113588052 - MGP_WSBEiJ_P0055621 Olfr1305 protein_coding protein_coding MGP_WSBEiJ_T0058459.1 MGP_WSBEiJ_G0026190.1 mouse_genomes_project 2 177137805 177149405 + MGP_WSBEiJ_P0058459 Fam210b protein_coding protein_coding MGP_WSBEiJ_T0056498.1 MGP_WSBEiJ_G0025724.1 mouse_genomes_project 2 130341276 130381590 + Acoxl protein_coding processed_transcript MGP_WSBEiJ_T0056499.1 MGP_WSBEiJ_G0025724.1 mouse_genomes_project 2 130357236 130644383 + MGP_WSBEiJ_P0056499 Acoxl protein_coding protein_coding MGP_WSBEiJ_T0056500.1 MGP_WSBEiJ_G0025724.1 mouse_genomes_project 2 130413494 130644018 + MGP_WSBEiJ_P0056500 Acoxl protein_coding protein_coding MGP_WSBEiJ_T0056135.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123409329 123454167 - MGP_WSBEiJ_P0056135 Ppip5k1 protein_coding protein_coding MGP_WSBEiJ_T0056136.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123409329 123454164 - MGP_WSBEiJ_P0056136 Ppip5k1 protein_coding protein_coding MGP_WSBEiJ_T0056137.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123409663 123454230 - MGP_WSBEiJ_P0056137 Ppip5k1 protein_coding protein_coding MGP_WSBEiJ_T0056138.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123410419 123456813 - MGP_WSBEiJ_P0056138 Ppip5k1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056139.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123421159 123436015 - MGP_WSBEiJ_P0056139 Ppip5k1 protein_coding protein_coding MGP_WSBEiJ_T0056140.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123421194 123433598 - MGP_WSBEiJ_P0056140 Ppip5k1 protein_coding protein_coding MGP_WSBEiJ_T0056141.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123421272 123435585 - MGP_WSBEiJ_P0056141 Ppip5k1 protein_coding protein_coding MGP_WSBEiJ_T0056142.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123427139 123436011 - MGP_WSBEiJ_P0056142 Ppip5k1 protein_coding protein_coding MGP_WSBEiJ_T0056143.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123427920 123435875 - Ppip5k1 protein_coding retained_intron MGP_WSBEiJ_T0056144.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123431218 123453911 - Ppip5k1 protein_coding retained_intron MGP_WSBEiJ_T0056145.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123433338 123440829 - Ppip5k1 protein_coding retained_intron MGP_WSBEiJ_T0056146.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123439217 123454145 - Ppip5k1 protein_coding retained_intron MGP_WSBEiJ_T0056147.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123442379 123447615 - MGP_WSBEiJ_P0056147 Ppip5k1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056148.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123445428 123454164 - Ppip5k1 protein_coding retained_intron MGP_WSBEiJ_T0056149.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123445851 123453909 - Ppip5k1 protein_coding retained_intron MGP_WSBEiJ_T0056150.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123447015 123453906 - Ppip5k1 protein_coding retained_intron MGP_WSBEiJ_T0056151.1 MGP_WSBEiJ_G0025638.1 mouse_genomes_project 2 123449300 123454118 - MGP_WSBEiJ_P0056151 Ppip5k1 protein_coding protein_coding MGP_WSBEiJ_T0057873.1 MGP_WSBEiJ_G0026044.1 mouse_genomes_project 2 162368659 162374245 + MGP_WSBEiJ_P0057873 Adig protein_coding protein_coding MGP_WSBEiJ_T0057874.1 MGP_WSBEiJ_G0026044.1 mouse_genomes_project 2 162368700 162374245 + MGP_WSBEiJ_P0057874 Adig protein_coding protein_coding MGP_WSBEiJ_T0057875.1 MGP_WSBEiJ_G0026044.1 mouse_genomes_project 2 162368786 162371956 + Adig protein_coding processed_transcript MGP_WSBEiJ_T0054280.1 MGP_WSBEiJ_G0025097.1 mouse_genomes_project 2 72933151 73064508 - MGP_WSBEiJ_P0054280 Ola1 protein_coding protein_coding MGP_WSBEiJ_T0054281.1 MGP_WSBEiJ_G0025097.1 mouse_genomes_project 2 72933550 73064487 - Ola1 protein_coding processed_transcript MGP_WSBEiJ_T0054282.1 MGP_WSBEiJ_G0025097.1 mouse_genomes_project 2 72933552 73063021 - MGP_WSBEiJ_P0054282 Ola1 protein_coding protein_coding MGP_WSBEiJ_T0054283.1 MGP_WSBEiJ_G0025097.1 mouse_genomes_project 2 72979927 73064394 - MGP_WSBEiJ_P0054283 Ola1 protein_coding protein_coding MGP_WSBEiJ_T0054284.1 MGP_WSBEiJ_G0025097.1 mouse_genomes_project 2 73048752 73064473 - Ola1 protein_coding processed_transcript MGP_WSBEiJ_T0054285.1 MGP_WSBEiJ_G0025097.1 mouse_genomes_project 2 73062931 73068986 - Ola1 protein_coding processed_transcript MGP_WSBEiJ_T0004008.1 MGP_WSBEiJ_G0003555.1 mouse_genomes_project 2 134334494 134404337 - Gm14280 antisense antisense MGP_WSBEiJ_T0056049.1 MGP_WSBEiJ_G0025625.1 mouse_genomes_project 2 122823057 122933234 - MGP_WSBEiJ_P0056049 Ttbk2 protein_coding protein_coding MGP_WSBEiJ_T0056050.1 MGP_WSBEiJ_G0025625.1 mouse_genomes_project 2 122823057 122933048 - MGP_WSBEiJ_P0056050 Ttbk2 protein_coding protein_coding MGP_WSBEiJ_T0056051.1 MGP_WSBEiJ_G0025625.1 mouse_genomes_project 2 122823057 122933036 - MGP_WSBEiJ_P0056051 Ttbk2 protein_coding protein_coding MGP_WSBEiJ_T0056052.1 MGP_WSBEiJ_G0025625.1 mouse_genomes_project 2 122835902 122933020 - MGP_WSBEiJ_P0056052 Ttbk2 protein_coding protein_coding MGP_WSBEiJ_T0056053.1 MGP_WSBEiJ_G0025625.1 mouse_genomes_project 2 122841121 122932994 - MGP_WSBEiJ_P0056053 Ttbk2 protein_coding protein_coding MGP_WSBEiJ_T0056054.1 MGP_WSBEiJ_G0025625.1 mouse_genomes_project 2 122885481 122933065 - Ttbk2 protein_coding processed_transcript MGP_WSBEiJ_T0057972.1 MGP_WSBEiJ_G0026065.1 mouse_genomes_project 2 167106867 167140550 + MGP_WSBEiJ_P0057972 Mybl2 protein_coding protein_coding MGP_WSBEiJ_T0057973.1 MGP_WSBEiJ_G0026065.1 mouse_genomes_project 2 167106978 167139156 + MGP_WSBEiJ_P0057973 Mybl2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0057974.1 MGP_WSBEiJ_G0026065.1 mouse_genomes_project 2 167111529 167119034 + Mybl2 protein_coding processed_transcript MGP_WSBEiJ_T0057975.1 MGP_WSBEiJ_G0026065.1 mouse_genomes_project 2 167123113 167127998 + Mybl2 protein_coding retained_intron MGP_WSBEiJ_T0057976.1 MGP_WSBEiJ_G0026065.1 mouse_genomes_project 2 167129599 167138561 + MGP_WSBEiJ_P0057976 Mybl2 protein_coding protein_coding MGP_WSBEiJ_T0057977.1 MGP_WSBEiJ_G0026065.1 mouse_genomes_project 2 167130007 167136638 + Mybl2 protein_coding retained_intron MGP_WSBEiJ_T0057233.1 MGP_WSBEiJ_G0025904.1 mouse_genomes_project 2 155799597 155806260 - Rbck1 protein_coding retained_intron MGP_WSBEiJ_T0057234.1 MGP_WSBEiJ_G0025904.1 mouse_genomes_project 2 155799597 155815698 - MGP_WSBEiJ_P0057234 Rbck1 protein_coding protein_coding MGP_WSBEiJ_T0057235.1 MGP_WSBEiJ_G0025904.1 mouse_genomes_project 2 155799597 155815939 - MGP_WSBEiJ_P0057235 Rbck1 protein_coding protein_coding MGP_WSBEiJ_T0057236.1 MGP_WSBEiJ_G0025904.1 mouse_genomes_project 2 155801574 155806761 - Rbck1 protein_coding retained_intron MGP_WSBEiJ_T0057237.1 MGP_WSBEiJ_G0025904.1 mouse_genomes_project 2 155802042 155807627 - MGP_WSBEiJ_P0057237 Rbck1 protein_coding protein_coding MGP_WSBEiJ_T0057238.1 MGP_WSBEiJ_G0025904.1 mouse_genomes_project 2 155806200 155807879 - Rbck1 protein_coding retained_intron MGP_WSBEiJ_T0057239.1 MGP_WSBEiJ_G0025904.1 mouse_genomes_project 2 155807802 155811020 - Rbck1 protein_coding processed_transcript MGP_WSBEiJ_T0057240.1 MGP_WSBEiJ_G0025904.1 mouse_genomes_project 2 155809666 155815670 - Rbck1 protein_coding processed_transcript MGP_WSBEiJ_T0053727.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51097243 51304130 - MGP_WSBEiJ_P0053727 Neb protein_coding protein_coding MGP_WSBEiJ_T0053728.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51097258 51300466 - MGP_WSBEiJ_P0053728 Neb protein_coding protein_coding MGP_WSBEiJ_T0053729.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51097258 51186244 - MGP_WSBEiJ_P0053729 Neb protein_coding protein_coding MGP_WSBEiJ_T0053730.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51097712 51118520 - Neb protein_coding processed_transcript MGP_WSBEiJ_T0053731.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51097853 51299813 - MGP_WSBEiJ_P0053731 Neb protein_coding unknown_likely_coding MGP_WSBEiJ_T0053732.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51097856 51136986 - MGP_WSBEiJ_P0053732 Neb protein_coding protein_coding MGP_WSBEiJ_T0053733.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51116945 51123550 - Neb protein_coding processed_transcript MGP_WSBEiJ_T0053734.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51134148 51136560 - Neb protein_coding processed_transcript MGP_WSBEiJ_T0053735.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51138417 51154978 - MGP_WSBEiJ_P0053735 Neb protein_coding protein_coding MGP_WSBEiJ_T0053736.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51184289 51220187 - MGP_WSBEiJ_P0053736 Neb protein_coding protein_coding MGP_WSBEiJ_T0053737.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51284994 51301094 - Neb protein_coding processed_transcript MGP_WSBEiJ_T0053738.1 MGP_WSBEiJ_G0024997.1 mouse_genomes_project 2 51294173 51304130 - Neb protein_coding processed_transcript MGP_WSBEiJ_T0053253.1 MGP_WSBEiJ_G0024899.1 mouse_genomes_project 2 31771812 31784633 - MGP_WSBEiJ_P0053253 Zbtb43 protein_coding protein_coding MGP_WSBEiJ_T0053254.1 MGP_WSBEiJ_G0024899.1 mouse_genomes_project 2 31771812 31790804 - MGP_WSBEiJ_P0053254 Zbtb43 protein_coding protein_coding MGP_WSBEiJ_T0053255.1 MGP_WSBEiJ_G0024899.1 mouse_genomes_project 2 31775047 31790777 - MGP_WSBEiJ_P0053255 Zbtb43 protein_coding protein_coding MGP_WSBEiJ_T0053256.1 MGP_WSBEiJ_G0024899.1 mouse_genomes_project 2 31776148 31787362 - MGP_WSBEiJ_P0053256 Zbtb43 protein_coding protein_coding MGP_WSBEiJ_T0053257.1 MGP_WSBEiJ_G0024899.1 mouse_genomes_project 2 31776417 31790831 - MGP_WSBEiJ_P0053257 Zbtb43 protein_coding protein_coding MGP_WSBEiJ_T0096812.1 MGP_WSBEiJ_G0035493.1 mouse_genomes_project 2 91617879 91618152 + pseudogene pseudogene MGP_WSBEiJ_T0054894.1 MGP_WSBEiJ_G0025367.1 mouse_genomes_project 2 90688539 90691858 + MGP_WSBEiJ_P0054894 Olfr1257 protein_coding protein_coding MGP_WSBEiJ_T0054895.1 MGP_WSBEiJ_G0025367.1 mouse_genomes_project 2 90690894 90691910 + MGP_WSBEiJ_P0054895 Olfr1257 protein_coding protein_coding MGP_WSBEiJ_T0013149.1 MGP_WSBEiJ_G0011279.1 mouse_genomes_project 2 35925189 35925959 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007309.1 MGP_WSBEiJ_G0005997.1 mouse_genomes_project 2 175331819 175341843 - Gm14264 lincRNA lincRNA MGP_WSBEiJ_T0053463.1 MGP_WSBEiJ_G0024948.1 mouse_genomes_project 2 35450709 35451702 - MGP_WSBEiJ_P0053463 Olfr358 protein_coding protein_coding MGP_WSBEiJ_T0004079.1 MGP_WSBEiJ_G0003609.1 mouse_genomes_project 2 168932254 168948450 - Gm11457 antisense antisense MGP_WSBEiJ_T0004080.1 MGP_WSBEiJ_G0003609.1 mouse_genomes_project 2 168932264 168948455 - Gm11457 antisense antisense MGP_WSBEiJ_T0004081.1 MGP_WSBEiJ_G0003609.1 mouse_genomes_project 2 168932276 168948497 - Gm11457 antisense antisense MGP_WSBEiJ_T0010280.1 MGP_WSBEiJ_G0008437.1 mouse_genomes_project 2 117478337 117478426 + Mir1951 miRNA miRNA MGP_WSBEiJ_T0017170.1 MGP_WSBEiJ_G0014832.1 mouse_genomes_project 2 29316482 29322303 - D330023K18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017171.1 MGP_WSBEiJ_G0014832.1 mouse_genomes_project 2 29320648 29322303 - D330023K18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0003884.1 MGP_WSBEiJ_G0003466.1 mouse_genomes_project 2 32643086 32664260 + C79798 antisense antisense MGP_WSBEiJ_T0054729.1 MGP_WSBEiJ_G0025229.1 mouse_genomes_project 2 86957957 86972404 - MGP_WSBEiJ_P0054729 protein_coding protein_coding MGP_WSBEiJ_T0013214.1 MGP_WSBEiJ_G0011344.1 mouse_genomes_project 2 59767702 59768844 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054907.1 MGP_WSBEiJ_G0025372.1 mouse_genomes_project 2 90804089 90806770 + MGP_WSBEiJ_P0054907 Olfr1263 protein_coding protein_coding MGP_WSBEiJ_T0052719.1 MGP_WSBEiJ_G0024820.1 mouse_genomes_project 2 28183340 28206555 + MGP_WSBEiJ_P0052719 Tbc1d13 protein_coding protein_coding MGP_WSBEiJ_T0052720.1 MGP_WSBEiJ_G0024820.1 mouse_genomes_project 2 28183340 28186888 + MGP_WSBEiJ_P0052720 Tbc1d13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052721.1 MGP_WSBEiJ_G0024820.1 mouse_genomes_project 2 28183366 28184747 + Tbc1d13 protein_coding retained_intron MGP_WSBEiJ_T0052722.1 MGP_WSBEiJ_G0024820.1 mouse_genomes_project 2 28183385 28186771 + Tbc1d13 protein_coding processed_transcript MGP_WSBEiJ_T0052723.1 MGP_WSBEiJ_G0024820.1 mouse_genomes_project 2 28183400 28186271 + MGP_WSBEiJ_P0052723 Tbc1d13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052724.1 MGP_WSBEiJ_G0024820.1 mouse_genomes_project 2 28183415 28187105 + Tbc1d13 protein_coding processed_transcript MGP_WSBEiJ_T0052725.1 MGP_WSBEiJ_G0024820.1 mouse_genomes_project 2 28186621 28195287 + Tbc1d13 protein_coding processed_transcript MGP_WSBEiJ_T0052726.1 MGP_WSBEiJ_G0024820.1 mouse_genomes_project 2 28195037 28201608 + Tbc1d13 protein_coding retained_intron MGP_WSBEiJ_T0054685.1 MGP_WSBEiJ_G0025187.1 mouse_genomes_project 2 85895691 85896636 - MGP_WSBEiJ_P0054685 Olfr994 protein_coding protein_coding MGP_WSBEiJ_T0017207.1 MGP_WSBEiJ_G0014859.1 mouse_genomes_project 2 88841052 88918033 - processed_transcript processed_transcript MGP_WSBEiJ_T0052530.1 MGP_WSBEiJ_G0024792.1 mouse_genomes_project 2 26502606 26510162 - MGP_WSBEiJ_P0052530 Cel protein_coding protein_coding MGP_WSBEiJ_T0052531.1 MGP_WSBEiJ_G0024792.1 mouse_genomes_project 2 26507328 26510203 - Cel protein_coding processed_transcript MGP_WSBEiJ_T0013473.1 MGP_WSBEiJ_G0011603.1 mouse_genomes_project 2 160598398 160607850 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003856.1 MGP_WSBEiJ_G0003443.1 mouse_genomes_project 2 24905289 24908824 + Gm13398 antisense antisense MGP_WSBEiJ_T0013215.1 MGP_WSBEiJ_G0011345.1 mouse_genomes_project 2 59787140 59787387 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017322.1 MGP_WSBEiJ_G0014912.1 mouse_genomes_project 2 171548922 171552280 + 1110018N20Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017323.1 MGP_WSBEiJ_G0014912.1 mouse_genomes_project 2 171549126 171552546 + 1110018N20Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017324.1 MGP_WSBEiJ_G0014912.1 mouse_genomes_project 2 171549667 171552829 + 1110018N20Rik processed_transcript processed_transcript MGP_WSBEiJ_T0013359.1 MGP_WSBEiJ_G0011489.1 mouse_genomes_project 2 113420366 113420522 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100705.1 MGP_WSBEiJ_G0039163.1 mouse_genomes_project 2 86292891 86293579 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0054137.1 MGP_WSBEiJ_G0025072.1 mouse_genomes_project 2 69508919 69524353 - MGP_WSBEiJ_P0054137 Mettl5 protein_coding protein_coding MGP_WSBEiJ_T0054138.1 MGP_WSBEiJ_G0025072.1 mouse_genomes_project 2 69508935 69524335 - MGP_WSBEiJ_P0054138 Mettl5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054139.1 MGP_WSBEiJ_G0025072.1 mouse_genomes_project 2 69508939 69511722 - Mettl5 protein_coding retained_intron MGP_WSBEiJ_T0054140.1 MGP_WSBEiJ_G0025072.1 mouse_genomes_project 2 69515495 69524342 - Mettl5 protein_coding retained_intron MGP_WSBEiJ_T0054835.1 MGP_WSBEiJ_G0025321.1 mouse_genomes_project 2 89547874 89549743 - MGP_WSBEiJ_P0054835 protein_coding protein_coding MGP_WSBEiJ_T0013350.1 MGP_WSBEiJ_G0011480.1 mouse_genomes_project 2 110096663 110097594 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054775.1 MGP_WSBEiJ_G0025273.1 mouse_genomes_project 2 88136452 88137014 + MGP_WSBEiJ_P0054775 protein_coding protein_coding MGP_WSBEiJ_T0098139.1 MGP_WSBEiJ_G0036802.1 mouse_genomes_project 2 171096781 171096884 + Gm24477 snRNA snRNA MGP_WSBEiJ_T0058267.1 MGP_WSBEiJ_G0026147.1 mouse_genomes_project 2 170265983 170350432 + MGP_WSBEiJ_P0058267 Ncoa3 protein_coding protein_coding MGP_WSBEiJ_T0058268.1 MGP_WSBEiJ_G0026147.1 mouse_genomes_project 2 170265984 170353610 + MGP_WSBEiJ_P0058268 Ncoa3 protein_coding protein_coding MGP_WSBEiJ_T0058269.1 MGP_WSBEiJ_G0026147.1 mouse_genomes_project 2 170324149 170328594 + Ncoa3 protein_coding processed_transcript MGP_WSBEiJ_T0058270.1 MGP_WSBEiJ_G0026147.1 mouse_genomes_project 2 170338157 170345198 + Ncoa3 protein_coding retained_intron MGP_WSBEiJ_T0058271.1 MGP_WSBEiJ_G0026147.1 mouse_genomes_project 2 170346423 170349165 + Ncoa3 protein_coding retained_intron MGP_WSBEiJ_T0000990.1 MGP_WSBEiJ_G0000925.1 mouse_genomes_project 2 3624243 3628124 + TEC TEC MGP_WSBEiJ_T0053663.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 47747775 48086885 + MGP_WSBEiJ_P0053663 Mbd5 protein_coding protein_coding MGP_WSBEiJ_T0053664.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 47747785 47929659 + Mbd5 protein_coding processed_transcript MGP_WSBEiJ_T0053665.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 47747790 48148287 + MGP_WSBEiJ_P0053665 Mbd5 protein_coding protein_coding MGP_WSBEiJ_T0053666.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 47748229 47823051 + Mbd5 protein_coding processed_transcript MGP_WSBEiJ_T0053667.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 47748230 47753938 + Mbd5 protein_coding processed_transcript MGP_WSBEiJ_T0053668.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 47748353 47929523 + Mbd5 protein_coding processed_transcript MGP_WSBEiJ_T0053669.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 47748431 48071042 + Mbd5 protein_coding processed_transcript MGP_WSBEiJ_T0053670.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 47748437 47866882 + Mbd5 protein_coding processed_transcript MGP_WSBEiJ_T0053671.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 48071453 48151807 + MGP_WSBEiJ_P0053671 Mbd5 protein_coding protein_coding MGP_WSBEiJ_T0053672.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 48071654 48097779 + MGP_WSBEiJ_P0053672 Mbd5 protein_coding protein_coding MGP_WSBEiJ_T0053673.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 48082887 48148313 + MGP_WSBEiJ_P0053673 Mbd5 protein_coding protein_coding MGP_WSBEiJ_T0053674.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 48097883 48157524 + MGP_WSBEiJ_P0053674 Mbd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053675.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 48106513 48147967 + MGP_WSBEiJ_P0053675 Mbd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053676.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 48106514 48147978 + MGP_WSBEiJ_P0053676 Mbd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053677.1 MGP_WSBEiJ_G0024985.1 mouse_genomes_project 2 48106662 48148201 + MGP_WSBEiJ_P0053677 Mbd5 protein_coding protein_coding MGP_WSBEiJ_T0053112.1 MGP_WSBEiJ_G0024877.1 mouse_genomes_project 2 30842181 30843192 + Pip5kl1 protein_coding processed_transcript MGP_WSBEiJ_T0053113.1 MGP_WSBEiJ_G0024877.1 mouse_genomes_project 2 30843102 30852210 + MGP_WSBEiJ_P0053113 Pip5kl1 protein_coding protein_coding MGP_WSBEiJ_T0053114.1 MGP_WSBEiJ_G0024877.1 mouse_genomes_project 2 30843227 30852199 + MGP_WSBEiJ_P0053114 Pip5kl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053115.1 MGP_WSBEiJ_G0024877.1 mouse_genomes_project 2 30848354 30852200 + Pip5kl1 protein_coding retained_intron MGP_WSBEiJ_T0004006.1 MGP_WSBEiJ_G0003553.1 mouse_genomes_project 2 133817334 133829128 + Gm14232 antisense antisense MGP_WSBEiJ_T0056196.1 MGP_WSBEiJ_G0025648.1 mouse_genomes_project 2 123639222 123658059 - MGP_WSBEiJ_P0056196 protein_coding protein_coding MGP_WSBEiJ_T0053220.1 MGP_WSBEiJ_G0024894.1 mouse_genomes_project 2 31273423 31284228 - Slc2a8 protein_coding retained_intron MGP_WSBEiJ_T0053221.1 MGP_WSBEiJ_G0024894.1 mouse_genomes_project 2 31273423 31284242 - MGP_WSBEiJ_P0053221 Slc2a8 protein_coding protein_coding MGP_WSBEiJ_T0053222.1 MGP_WSBEiJ_G0024894.1 mouse_genomes_project 2 31274018 31284177 - MGP_WSBEiJ_P0053222 Slc2a8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053223.1 MGP_WSBEiJ_G0024894.1 mouse_genomes_project 2 31274018 31284177 - MGP_WSBEiJ_P0053223 Slc2a8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053224.1 MGP_WSBEiJ_G0024894.1 mouse_genomes_project 2 31274018 31284177 - MGP_WSBEiJ_P0053224 Slc2a8 protein_coding protein_coding MGP_WSBEiJ_T0053225.1 MGP_WSBEiJ_G0024894.1 mouse_genomes_project 2 31276359 31284231 - MGP_WSBEiJ_P0053225 Slc2a8 protein_coding protein_coding MGP_WSBEiJ_T0053226.1 MGP_WSBEiJ_G0024894.1 mouse_genomes_project 2 31277343 31284179 - Slc2a8 protein_coding retained_intron MGP_WSBEiJ_T0053227.1 MGP_WSBEiJ_G0024894.1 mouse_genomes_project 2 31283645 31284243 - Slc2a8 protein_coding processed_transcript MGP_WSBEiJ_T0054758.1 MGP_WSBEiJ_G0025256.1 mouse_genomes_project 2 87635891 87636830 - MGP_WSBEiJ_P0054758 Olfr1105 protein_coding protein_coding MGP_WSBEiJ_T0053356.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33509106 33578524 + MGP_WSBEiJ_P0053356 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053357.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33509106 33579236 + MGP_WSBEiJ_P0053357 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053358.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33509106 33530642 + MGP_WSBEiJ_P0053358 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053359.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33509233 33578836 + MGP_WSBEiJ_P0053359 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053360.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33527349 33547558 + MGP_WSBEiJ_P0053360 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053361.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33532157 33560522 + MGP_WSBEiJ_P0053361 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053362.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33532157 33579236 + MGP_WSBEiJ_P0053362 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053363.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33532181 33537607 + MGP_WSBEiJ_P0053363 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053364.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33532181 33547558 + MGP_WSBEiJ_P0053364 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053365.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33544980 33547558 + MGP_WSBEiJ_P0053365 Cntrl protein_coding protein_coding MGP_WSBEiJ_T0053366.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33560193 33566217 + MGP_WSBEiJ_P0053366 Cntrl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053367.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33562173 33566645 + Cntrl protein_coding retained_intron MGP_WSBEiJ_T0053368.1 MGP_WSBEiJ_G0024914.1 mouse_genomes_project 2 33575668 33579225 + Cntrl protein_coding retained_intron MGP_WSBEiJ_T0058115.1 MGP_WSBEiJ_G0026120.1 mouse_genomes_project 2 168948728 168951738 + MGP_WSBEiJ_P0058115 Ube2c protein_coding protein_coding MGP_WSBEiJ_T0058116.1 MGP_WSBEiJ_G0026120.1 mouse_genomes_project 2 168948733 168958511 + MGP_WSBEiJ_P0058116 Ube2c protein_coding protein_coding MGP_WSBEiJ_T0058119.1 MGP_WSBEiJ_G0026122.1 mouse_genomes_project 2 168966724 168973386 + MGP_WSBEiJ_P0058119 Snx21 protein_coding protein_coding MGP_WSBEiJ_T0058120.1 MGP_WSBEiJ_G0026122.1 mouse_genomes_project 2 168966892 168974709 + MGP_WSBEiJ_P0058120 Snx21 protein_coding protein_coding MGP_WSBEiJ_T0058121.1 MGP_WSBEiJ_G0026122.1 mouse_genomes_project 2 168966892 168973951 + MGP_WSBEiJ_P0058121 Snx21 protein_coding protein_coding MGP_WSBEiJ_T0058122.1 MGP_WSBEiJ_G0026122.1 mouse_genomes_project 2 168966918 168968534 + MGP_WSBEiJ_P0058122 Snx21 protein_coding protein_coding MGP_WSBEiJ_T0058123.1 MGP_WSBEiJ_G0026122.1 mouse_genomes_project 2 168967695 168973523 + MGP_WSBEiJ_P0058123 Snx21 protein_coding protein_coding MGP_WSBEiJ_T0058124.1 MGP_WSBEiJ_G0026122.1 mouse_genomes_project 2 168971309 168974715 + Snx21 protein_coding retained_intron MGP_WSBEiJ_T0058125.1 MGP_WSBEiJ_G0026122.1 mouse_genomes_project 2 168972550 168974707 + Snx21 protein_coding processed_transcript MGP_WSBEiJ_T0053330.1 MGP_WSBEiJ_G0024909.1 mouse_genomes_project 2 33265270 33275205 + Cutal protein_coding retained_intron MGP_WSBEiJ_T0053331.1 MGP_WSBEiJ_G0024909.1 mouse_genomes_project 2 33265337 33284840 + MGP_WSBEiJ_P0053331 Cutal protein_coding protein_coding MGP_WSBEiJ_T0055859.1 MGP_WSBEiJ_G0025594.1 mouse_genomes_project 2 121393087 121483042 - MGP_WSBEiJ_P0055859 Ino80 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055860.1 MGP_WSBEiJ_G0025594.1 mouse_genomes_project 2 121423852 121501584 - MGP_WSBEiJ_P0055860 Ino80 protein_coding protein_coding MGP_WSBEiJ_T0055861.1 MGP_WSBEiJ_G0025594.1 mouse_genomes_project 2 121455885 121462282 - Ino80 protein_coding retained_intron MGP_WSBEiJ_T0007286.1 MGP_WSBEiJ_G0005978.1 mouse_genomes_project 2 172105229 172144350 + A530013C23Rik lincRNA lincRNA MGP_WSBEiJ_T0007287.1 MGP_WSBEiJ_G0005978.1 mouse_genomes_project 2 172105233 172111849 + A530013C23Rik lincRNA lincRNA MGP_WSBEiJ_T0058670.1 MGP_WSBEiJ_G0026248.1 mouse_genomes_project 2 185878370 185886692 + MGP_WSBEiJ_P0058670 Gid8 protein_coding protein_coding MGP_WSBEiJ_T0058671.1 MGP_WSBEiJ_G0026248.1 mouse_genomes_project 2 185879936 185882989 + Gid8 protein_coding processed_transcript MGP_WSBEiJ_T0058672.1 MGP_WSBEiJ_G0026248.1 mouse_genomes_project 2 185880795 185886689 + MGP_WSBEiJ_P0058672 Gid8 protein_coding protein_coding MGP_WSBEiJ_T0098099.1 MGP_WSBEiJ_G0036762.1 mouse_genomes_project 2 43085279 43085388 + Gm22867 snRNA snRNA MGP_WSBEiJ_T0055876.1 MGP_WSBEiJ_G0025599.1 mouse_genomes_project 2 121689133 121702512 - MGP_WSBEiJ_P0055876 Ndufaf1 protein_coding protein_coding MGP_WSBEiJ_T0055877.1 MGP_WSBEiJ_G0025599.1 mouse_genomes_project 2 121700198 121702485 - Ndufaf1 protein_coding processed_transcript MGP_WSBEiJ_T0055878.1 MGP_WSBEiJ_G0025599.1 mouse_genomes_project 2 121700378 121702500 - Ndufaf1 protein_coding processed_transcript MGP_WSBEiJ_T0055781.1 MGP_WSBEiJ_G0025574.1 mouse_genomes_project 2 120763406 120798445 + MGP_WSBEiJ_P0055781 Disp2 protein_coding protein_coding MGP_WSBEiJ_T0055782.1 MGP_WSBEiJ_G0025574.1 mouse_genomes_project 2 120763409 120778887 + MGP_WSBEiJ_P0055782 Disp2 protein_coding protein_coding MGP_WSBEiJ_T0055783.1 MGP_WSBEiJ_G0025574.1 mouse_genomes_project 2 120763426 120798564 + MGP_WSBEiJ_P0055783 Disp2 protein_coding protein_coding MGP_WSBEiJ_T0055784.1 MGP_WSBEiJ_G0025574.1 mouse_genomes_project 2 120763429 120773758 + MGP_WSBEiJ_P0055784 Disp2 protein_coding protein_coding MGP_WSBEiJ_T0055785.1 MGP_WSBEiJ_G0025574.1 mouse_genomes_project 2 120763446 120773757 + Disp2 protein_coding retained_intron MGP_WSBEiJ_T0058293.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171243279 171281267 + Cse1l protein_coding processed_transcript MGP_WSBEiJ_T0058294.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171243298 171283110 + MGP_WSBEiJ_P0058294 Cse1l protein_coding protein_coding MGP_WSBEiJ_T0058295.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171243350 171282822 + MGP_WSBEiJ_P0058295 Cse1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058296.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171251953 171282514 + MGP_WSBEiJ_P0058296 Cse1l protein_coding protein_coding MGP_WSBEiJ_T0058297.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171264177 171282529 + MGP_WSBEiJ_P0058297 Cse1l protein_coding protein_coding MGP_WSBEiJ_T0058298.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171264212 171269037 + Cse1l protein_coding retained_intron MGP_WSBEiJ_T0058299.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171264371 171271720 + Cse1l protein_coding retained_intron MGP_WSBEiJ_T0058300.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171264415 171274059 + Cse1l protein_coding processed_transcript MGP_WSBEiJ_T0058301.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171271387 171281570 + Cse1l protein_coding retained_intron MGP_WSBEiJ_T0058302.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171271414 171278092 + MGP_WSBEiJ_P0058302 Cse1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058303.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171273730 171277888 + Cse1l protein_coding retained_intron MGP_WSBEiJ_T0058304.1 MGP_WSBEiJ_G0026153.1 mouse_genomes_project 2 171277470 171278456 + Cse1l protein_coding retained_intron MGP_WSBEiJ_T0010222.1 MGP_WSBEiJ_G0008379.1 mouse_genomes_project 2 24440203 24440261 - Mir126b miRNA miRNA MGP_WSBEiJ_T0013352.1 MGP_WSBEiJ_G0011482.1 mouse_genomes_project 2 110263983 110264974 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051806.1 MGP_WSBEiJ_G0024657.1 mouse_genomes_project 2 19851274 20238498 + MGP_WSBEiJ_P0051806 Myo3a protein_coding protein_coding MGP_WSBEiJ_T0051807.1 MGP_WSBEiJ_G0024657.1 mouse_genomes_project 2 19851276 19927016 + Myo3a protein_coding processed_transcript MGP_WSBEiJ_T0051808.1 MGP_WSBEiJ_G0024657.1 mouse_genomes_project 2 19851276 19914992 + Myo3a protein_coding processed_transcript MGP_WSBEiJ_T0051809.1 MGP_WSBEiJ_G0024657.1 mouse_genomes_project 2 19870369 20026108 + MGP_WSBEiJ_P0051809 Myo3a protein_coding protein_coding MGP_WSBEiJ_T0051810.1 MGP_WSBEiJ_G0024657.1 mouse_genomes_project 2 20178784 20238493 + MGP_WSBEiJ_P0051810 Myo3a protein_coding protein_coding MGP_WSBEiJ_T0051811.1 MGP_WSBEiJ_G0024657.1 mouse_genomes_project 2 20193589 20222072 + Myo3a protein_coding processed_transcript MGP_WSBEiJ_T0057257.1 MGP_WSBEiJ_G0025916.1 mouse_genomes_project 2 156063976 156064177 + MGP_WSBEiJ_P0057257 Gm17416 protein_coding protein_coding MGP_WSBEiJ_T0054151.1 MGP_WSBEiJ_G0025074.1 mouse_genomes_project 2 69687738 70099987 + MGP_WSBEiJ_P0054151 Myo3b protein_coding protein_coding MGP_WSBEiJ_T0054152.1 MGP_WSBEiJ_G0025074.1 mouse_genomes_project 2 69733946 70099990 + MGP_WSBEiJ_P0054152 Myo3b protein_coding protein_coding MGP_WSBEiJ_T0054153.1 MGP_WSBEiJ_G0025074.1 mouse_genomes_project 2 69747760 70099969 + MGP_WSBEiJ_P0054153 Myo3b protein_coding unknown_likely_coding MGP_WSBEiJ_T0054154.1 MGP_WSBEiJ_G0025074.1 mouse_genomes_project 2 69748867 69839670 + MGP_WSBEiJ_P0054154 Myo3b protein_coding protein_coding MGP_WSBEiJ_T0003891.1 MGP_WSBEiJ_G0003473.1 mouse_genomes_project 2 37306344 37323371 + Nr6a1os antisense antisense MGP_WSBEiJ_T0003892.1 MGP_WSBEiJ_G0003473.1 mouse_genomes_project 2 37306428 37341536 + Nr6a1os antisense antisense MGP_WSBEiJ_T0056585.1 MGP_WSBEiJ_G0025747.1 mouse_genomes_project 2 132617076 132660224 + MGP_WSBEiJ_P0056585 Tgm3 protein_coding protein_coding MGP_WSBEiJ_T0001034.1 MGP_WSBEiJ_G0000969.1 mouse_genomes_project 2 34221207 34224234 - TEC TEC MGP_WSBEiJ_T0055211.1 MGP_WSBEiJ_G0025422.1 mouse_genomes_project 2 93284982 93292006 - MGP_WSBEiJ_P0055211 Slc35c1 protein_coding protein_coding MGP_WSBEiJ_T0055212.1 MGP_WSBEiJ_G0025422.1 mouse_genomes_project 2 93284985 93292750 - MGP_WSBEiJ_P0055212 Slc35c1 protein_coding protein_coding MGP_WSBEiJ_T0055213.1 MGP_WSBEiJ_G0025422.1 mouse_genomes_project 2 93290897 93291921 - MGP_WSBEiJ_P0055213 Slc35c1 protein_coding protein_coding MGP_WSBEiJ_T0053434.1 MGP_WSBEiJ_G0024927.1 mouse_genomes_project 2 34597182 34599602 + protein_coding retained_intron MGP_WSBEiJ_T0053435.1 MGP_WSBEiJ_G0024927.1 mouse_genomes_project 2 34597259 34658768 + MGP_WSBEiJ_P0053435 protein_coding unknown_likely_coding MGP_WSBEiJ_T0053436.1 MGP_WSBEiJ_G0024927.1 mouse_genomes_project 2 34597418 34608545 + MGP_WSBEiJ_P0053436 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053437.1 MGP_WSBEiJ_G0024927.1 mouse_genomes_project 2 34607728 34619924 + protein_coding processed_transcript MGP_WSBEiJ_T0003923.1 MGP_WSBEiJ_G0003498.1 mouse_genomes_project 2 71257189 71268654 - Dlx1as antisense antisense MGP_WSBEiJ_T0003924.1 MGP_WSBEiJ_G0003498.1 mouse_genomes_project 2 71264767 71268662 - Dlx1as antisense antisense MGP_WSBEiJ_T0003925.1 MGP_WSBEiJ_G0003498.1 mouse_genomes_project 2 71268573 71280431 - Dlx1as antisense antisense MGP_WSBEiJ_T0003926.1 MGP_WSBEiJ_G0003498.1 mouse_genomes_project 2 71273504 71280512 - Dlx1as antisense antisense MGP_WSBEiJ_T0098113.1 MGP_WSBEiJ_G0036776.1 mouse_genomes_project 2 91930868 91930974 + Gm23390 snRNA snRNA MGP_WSBEiJ_T0058155.1 MGP_WSBEiJ_G0026129.1 mouse_genomes_project 2 169020640 169039967 - MGP_WSBEiJ_P0058155 Pltp protein_coding protein_coding MGP_WSBEiJ_T0058156.1 MGP_WSBEiJ_G0026129.1 mouse_genomes_project 2 169020640 169040045 - MGP_WSBEiJ_P0058156 Pltp protein_coding protein_coding MGP_WSBEiJ_T0058157.1 MGP_WSBEiJ_G0026129.1 mouse_genomes_project 2 169020640 169039876 - MGP_WSBEiJ_P0058157 Pltp protein_coding protein_coding MGP_WSBEiJ_T0058158.1 MGP_WSBEiJ_G0026129.1 mouse_genomes_project 2 169027942 169039130 - Pltp protein_coding retained_intron MGP_WSBEiJ_T0058159.1 MGP_WSBEiJ_G0026129.1 mouse_genomes_project 2 169034807 169039960 - Pltp protein_coding processed_transcript MGP_WSBEiJ_T0058160.1 MGP_WSBEiJ_G0026129.1 mouse_genomes_project 2 169034944 169039954 - MGP_WSBEiJ_P0058160 Pltp protein_coding protein_coding MGP_WSBEiJ_T0058161.1 MGP_WSBEiJ_G0026129.1 mouse_genomes_project 2 169036655 169039964 - MGP_WSBEiJ_P0058161 Pltp protein_coding protein_coding MGP_WSBEiJ_T0056823.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135227376 135279139 - MGP_WSBEiJ_P0056823 Gpcpd1 protein_coding protein_coding MGP_WSBEiJ_T0056824.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135231948 135244902 - Gpcpd1 protein_coding retained_intron MGP_WSBEiJ_T0056825.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135231948 135285983 - MGP_WSBEiJ_P0056825 Gpcpd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056826.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135231948 135286040 - MGP_WSBEiJ_P0056826 Gpcpd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056827.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135231948 135286053 - MGP_WSBEiJ_P0056827 Gpcpd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056828.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135237016 135240997 - MGP_WSBEiJ_P0056828 Gpcpd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056829.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135254570 135285992 - MGP_WSBEiJ_P0056829 Gpcpd1 protein_coding protein_coding MGP_WSBEiJ_T0056830.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135259181 135295531 - MGP_WSBEiJ_P0056830 Gpcpd1 protein_coding protein_coding MGP_WSBEiJ_T0056831.1 MGP_WSBEiJ_G0025797.1 mouse_genomes_project 2 135259293 135286022 - Gpcpd1 protein_coding processed_transcript MGP_WSBEiJ_T0052115.1 MGP_WSBEiJ_G0024711.1 mouse_genomes_project 2 23186204 23188121 + MGP_WSBEiJ_P0052115 Fut7 protein_coding protein_coding MGP_WSBEiJ_T0052116.1 MGP_WSBEiJ_G0024711.1 mouse_genomes_project 2 23186316 23189309 + MGP_WSBEiJ_P0052116 Fut7 protein_coding protein_coding MGP_WSBEiJ_T0052117.1 MGP_WSBEiJ_G0024711.1 mouse_genomes_project 2 23186490 23189312 + MGP_WSBEiJ_P0052117 Fut7 protein_coding protein_coding MGP_WSBEiJ_T0052118.1 MGP_WSBEiJ_G0024711.1 mouse_genomes_project 2 23186631 23189312 + MGP_WSBEiJ_P0052118 Fut7 protein_coding protein_coding MGP_WSBEiJ_T0052119.1 MGP_WSBEiJ_G0024711.1 mouse_genomes_project 2 23187585 23188029 + Fut7 protein_coding processed_transcript MGP_WSBEiJ_T0017243.1 MGP_WSBEiJ_G0014877.1 mouse_genomes_project 2 115756211 115770648 + A530058N18Rik processed_transcript antisense MGP_WSBEiJ_T0017244.1 MGP_WSBEiJ_G0014877.1 mouse_genomes_project 2 115756319 115774943 + A530058N18Rik processed_transcript antisense MGP_WSBEiJ_T0017245.1 MGP_WSBEiJ_G0014877.1 mouse_genomes_project 2 115756320 115774234 + A530058N18Rik processed_transcript antisense MGP_WSBEiJ_T0017246.1 MGP_WSBEiJ_G0014877.1 mouse_genomes_project 2 115756322 115774756 + A530058N18Rik processed_transcript antisense MGP_WSBEiJ_T0017247.1 MGP_WSBEiJ_G0014877.1 mouse_genomes_project 2 115756335 115763273 + A530058N18Rik processed_transcript retained_intron MGP_WSBEiJ_T0017248.1 MGP_WSBEiJ_G0014877.1 mouse_genomes_project 2 115756353 115760116 + A530058N18Rik processed_transcript antisense MGP_WSBEiJ_T0017249.1 MGP_WSBEiJ_G0014877.1 mouse_genomes_project 2 115756354 115774102 + A530058N18Rik processed_transcript antisense MGP_WSBEiJ_T0003864.1 MGP_WSBEiJ_G0003450.1 mouse_genomes_project 2 28290311 28291741 - 1700084E18Rik antisense antisense MGP_WSBEiJ_T0003865.1 MGP_WSBEiJ_G0003450.1 mouse_genomes_project 2 28291009 28291741 - 1700084E18Rik antisense pseudogene MGP_WSBEiJ_T0054359.1 MGP_WSBEiJ_G0025115.1 mouse_genomes_project 2 74600657 74638917 + MGP_WSBEiJ_P0054359 Hoxd3 protein_coding protein_coding MGP_WSBEiJ_T0054364.1 MGP_WSBEiJ_G0025115.1 mouse_genomes_project 2 74621596 74634861 + MGP_WSBEiJ_P0054364 Hoxd3 protein_coding protein_coding MGP_WSBEiJ_T0054365.1 MGP_WSBEiJ_G0025115.1 mouse_genomes_project 2 74625206 74638561 + MGP_WSBEiJ_P0054365 Hoxd3 protein_coding protein_coding MGP_WSBEiJ_T0054366.1 MGP_WSBEiJ_G0025115.1 mouse_genomes_project 2 74628309 74638546 + MGP_WSBEiJ_P0054366 Hoxd3 protein_coding protein_coding MGP_WSBEiJ_T0054367.1 MGP_WSBEiJ_G0025115.1 mouse_genomes_project 2 74636319 74637242 + MGP_WSBEiJ_P0054367 Hoxd3 protein_coding protein_coding MGP_WSBEiJ_T0054368.1 MGP_WSBEiJ_G0025115.1 mouse_genomes_project 2 74636367 74639088 + Hoxd3 protein_coding retained_intron MGP_WSBEiJ_T0052475.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25325874 25358929 - MGP_WSBEiJ_P0052475 Brd3 protein_coding protein_coding MGP_WSBEiJ_T0052476.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25325874 25359223 - MGP_WSBEiJ_P0052476 Brd3 protein_coding protein_coding MGP_WSBEiJ_T0052477.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25325895 25359210 - MGP_WSBEiJ_P0052477 Brd3 protein_coding protein_coding MGP_WSBEiJ_T0052478.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25328134 25344368 - MGP_WSBEiJ_P0052478 Brd3 protein_coding protein_coding MGP_WSBEiJ_T0052479.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25329522 25395575 - MGP_WSBEiJ_P0052479 Brd3 protein_coding protein_coding MGP_WSBEiJ_T0052480.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25329522 25359191 - MGP_WSBEiJ_P0052480 Brd3 protein_coding protein_coding MGP_WSBEiJ_T0052481.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25333250 25359190 - Brd3 protein_coding processed_transcript MGP_WSBEiJ_T0052482.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25343782 25359144 - MGP_WSBEiJ_P0052482 Brd3 protein_coding protein_coding MGP_WSBEiJ_T0052483.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25344143 25344834 - Brd3 protein_coding processed_transcript MGP_WSBEiJ_T0052484.1 MGP_WSBEiJ_G0024780.1 mouse_genomes_project 2 25344250 25358712 - Brd3 protein_coding processed_transcript MGP_WSBEiJ_T0017298.1 MGP_WSBEiJ_G0014902.1 mouse_genomes_project 2 160346329 160350544 - Gm14169 processed_transcript processed_transcript MGP_WSBEiJ_T0010191.1 MGP_WSBEiJ_G0008348.1 mouse_genomes_project 2 7822154 7822251 + Mir669a-2 miRNA miRNA MGP_WSBEiJ_T0056337.1 MGP_WSBEiJ_G0025687.1 mouse_genomes_project 2 128164531 128212474 - MGP_WSBEiJ_P0056337 Secisbp2l protein_coding protein_coding MGP_WSBEiJ_T0056338.1 MGP_WSBEiJ_G0025687.1 mouse_genomes_project 2 128172973 128189069 - MGP_WSBEiJ_P0056338 Secisbp2l protein_coding protein_coding MGP_WSBEiJ_T0056339.1 MGP_WSBEiJ_G0025687.1 mouse_genomes_project 2 128178581 128180468 - Secisbp2l protein_coding retained_intron MGP_WSBEiJ_T0057118.1 MGP_WSBEiJ_G0025872.1 mouse_genomes_project 2 152154205 152157794 + MGP_WSBEiJ_P0057118 Cst9 protein_coding protein_coding MGP_WSBEiJ_T0052597.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27344907 27527284 + MGP_WSBEiJ_P0052597 Med27 protein_coding protein_coding MGP_WSBEiJ_T0052598.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27344921 27479160 + MGP_WSBEiJ_P0052598 Med27 protein_coding protein_coding MGP_WSBEiJ_T0052599.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27378104 27511943 + MGP_WSBEiJ_P0052599 Med27 protein_coding protein_coding MGP_WSBEiJ_T0052600.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27378104 27501885 + MGP_WSBEiJ_P0052600 Med27 protein_coding protein_coding MGP_WSBEiJ_T0052601.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27378778 27501782 + MGP_WSBEiJ_P0052601 Med27 protein_coding protein_coding MGP_WSBEiJ_T0052602.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27378797 27527046 + MGP_WSBEiJ_P0052602 Med27 protein_coding protein_coding MGP_WSBEiJ_T0052603.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27378869 27478348 + MGP_WSBEiJ_P0052603 Med27 protein_coding protein_coding MGP_WSBEiJ_T0052604.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27391583 27525342 + Med27 protein_coding processed_transcript MGP_WSBEiJ_T0052605.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27498073 27502107 + Med27 protein_coding retained_intron MGP_WSBEiJ_T0052606.1 MGP_WSBEiJ_G0024805.1 mouse_genomes_project 2 27507397 27527172 + Med27 protein_coding processed_transcript MGP_WSBEiJ_T0054183.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70660623 70755008 - MGP_WSBEiJ_P0054183 Mettl8 protein_coding protein_coding MGP_WSBEiJ_T0054184.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70660630 70755034 - MGP_WSBEiJ_P0054184 Mettl8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054185.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70660630 70755034 - MGP_WSBEiJ_P0054185 Mettl8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054186.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70660630 70755034 - MGP_WSBEiJ_P0054186 Mettl8 protein_coding protein_coding MGP_WSBEiJ_T0054187.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70662234 70670424 - MGP_WSBEiJ_P0054187 Mettl8 protein_coding protein_coding MGP_WSBEiJ_T0054188.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70662552 70678512 - MGP_WSBEiJ_P0054188 Mettl8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054189.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70664085 70673037 - Mettl8 protein_coding retained_intron MGP_WSBEiJ_T0054190.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70675301 70755023 - MGP_WSBEiJ_P0054190 Mettl8 protein_coding protein_coding MGP_WSBEiJ_T0054191.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70677386 70755034 - Mettl8 protein_coding retained_intron MGP_WSBEiJ_T0054192.1 MGP_WSBEiJ_G0025081.1 mouse_genomes_project 2 70689665 70715556 - Mettl8 protein_coding retained_intron MGP_WSBEiJ_T0056652.1 MGP_WSBEiJ_G0025764.1 mouse_genomes_project 2 133216027 133262327 - MGP_WSBEiJ_P0056652 Ubox5 protein_coding protein_coding MGP_WSBEiJ_T0056653.1 MGP_WSBEiJ_G0025764.1 mouse_genomes_project 2 133227312 133262316 - MGP_WSBEiJ_P0056653 Ubox5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055845.1 MGP_WSBEiJ_G0025588.1 mouse_genomes_project 2 121226117 121240274 - MGP_WSBEiJ_P0055845 Ppp1r14d protein_coding protein_coding MGP_WSBEiJ_T0055846.1 MGP_WSBEiJ_G0025588.1 mouse_genomes_project 2 121226138 121240233 - MGP_WSBEiJ_P0055846 Ppp1r14d protein_coding protein_coding MGP_WSBEiJ_T0013115.1 MGP_WSBEiJ_G0011245.1 mouse_genomes_project 2 20847883 20849531 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058334.1 MGP_WSBEiJ_G0026159.1 mouse_genomes_project 2 171551825 171612557 - MGP_WSBEiJ_P0058334 Ptgis protein_coding protein_coding MGP_WSBEiJ_T0058335.1 MGP_WSBEiJ_G0026159.1 mouse_genomes_project 2 171569778 171612572 - MGP_WSBEiJ_P0058335 Ptgis protein_coding protein_coding MGP_WSBEiJ_T0058336.1 MGP_WSBEiJ_G0026159.1 mouse_genomes_project 2 171573393 171575288 - Ptgis protein_coding retained_intron MGP_WSBEiJ_T0010225.1 MGP_WSBEiJ_G0008382.1 mouse_genomes_project 2 26694658 26694732 + Mir3088 miRNA miRNA MGP_WSBEiJ_T0056267.1 MGP_WSBEiJ_G0025670.1 mouse_genomes_project 2 124851967 124870643 - MGP_WSBEiJ_P0056267 Gatm protein_coding protein_coding MGP_WSBEiJ_T0056268.1 MGP_WSBEiJ_G0025670.1 mouse_genomes_project 2 124852940 124855962 - Gatm protein_coding processed_transcript MGP_WSBEiJ_T0056269.1 MGP_WSBEiJ_G0025670.1 mouse_genomes_project 2 124853057 124856240 - Gatm protein_coding retained_intron MGP_WSBEiJ_T0001053.1 MGP_WSBEiJ_G0000988.1 mouse_genomes_project 2 68577947 68578812 + TEC TEC MGP_WSBEiJ_T0003987.1 MGP_WSBEiJ_G0003539.1 mouse_genomes_project 2 122095859 122098465 - Gm13999 antisense antisense MGP_WSBEiJ_T0055804.1 MGP_WSBEiJ_G0025578.1 mouse_genomes_project 2 120916256 120918346 + MGP_WSBEiJ_P0055804 Chst14 protein_coding protein_coding MGP_WSBEiJ_T0055805.1 MGP_WSBEiJ_G0025578.1 mouse_genomes_project 2 120916274 120918340 + MGP_WSBEiJ_P0055805 Chst14 protein_coding protein_coding MGP_WSBEiJ_T0055884.1 MGP_WSBEiJ_G0025602.1 mouse_genomes_project 2 121795919 121804764 - MGP_WSBEiJ_P0055884 Ltk protein_coding protein_coding MGP_WSBEiJ_T0055885.1 MGP_WSBEiJ_G0025602.1 mouse_genomes_project 2 121795921 121803072 - Ltk protein_coding retained_intron MGP_WSBEiJ_T0055886.1 MGP_WSBEiJ_G0025602.1 mouse_genomes_project 2 121795921 121804763 - MGP_WSBEiJ_P0055886 Ltk protein_coding protein_coding MGP_WSBEiJ_T0055887.1 MGP_WSBEiJ_G0025602.1 mouse_genomes_project 2 121795925 121804900 - MGP_WSBEiJ_P0055887 Ltk protein_coding protein_coding MGP_WSBEiJ_T0055888.1 MGP_WSBEiJ_G0025602.1 mouse_genomes_project 2 121795927 121803076 - MGP_WSBEiJ_P0055888 Ltk protein_coding protein_coding MGP_WSBEiJ_T0055889.1 MGP_WSBEiJ_G0025602.1 mouse_genomes_project 2 121795929 121803070 - Ltk protein_coding retained_intron MGP_WSBEiJ_T0098119.1 MGP_WSBEiJ_G0036782.1 mouse_genomes_project 2 120027144 120027302 - Gm25308 snRNA snRNA MGP_WSBEiJ_T0055349.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103923198 104054584 + MGP_WSBEiJ_P0055349 Slc1a2 protein_coding protein_coding MGP_WSBEiJ_T0055350.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103923762 103999786 + Slc1a2 protein_coding processed_transcript MGP_WSBEiJ_T0055351.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103923797 103999783 + Slc1a2 protein_coding processed_transcript MGP_WSBEiJ_T0055352.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103923820 104041813 + MGP_WSBEiJ_P0055352 Slc1a2 protein_coding protein_coding MGP_WSBEiJ_T0055353.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103940549 103999783 + Slc1a2 protein_coding processed_transcript MGP_WSBEiJ_T0055354.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103970229 104003700 + MGP_WSBEiJ_P0055354 Slc1a2 protein_coding protein_coding MGP_WSBEiJ_T0055355.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103970311 104045454 + MGP_WSBEiJ_P0055355 Slc1a2 protein_coding protein_coding MGP_WSBEiJ_T0055356.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103970311 104041822 + MGP_WSBEiJ_P0055356 Slc1a2 protein_coding protein_coding MGP_WSBEiJ_T0055357.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 103982824 103999779 + Slc1a2 protein_coding processed_transcript MGP_WSBEiJ_T0055358.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 104019613 104041300 + MGP_WSBEiJ_P0055358 Slc1a2 protein_coding protein_coding MGP_WSBEiJ_T0055359.1 MGP_WSBEiJ_G0025451.1 mouse_genomes_project 2 104024878 104045268 + MGP_WSBEiJ_P0055359 Slc1a2 protein_coding protein_coding MGP_WSBEiJ_T0098096.1 MGP_WSBEiJ_G0036759.1 mouse_genomes_project 2 33310556 33310660 + Gm24905 snRNA snRNA MGP_WSBEiJ_T0054740.1 MGP_WSBEiJ_G0025239.1 mouse_genomes_project 2 87195384 87199450 - MGP_WSBEiJ_P0054740 Olfr1085 protein_coding protein_coding MGP_WSBEiJ_T0058364.1 MGP_WSBEiJ_G0026165.1 mouse_genomes_project 2 172016859 172042792 - MGP_WSBEiJ_P0058364 Ube2v1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0058365.1 MGP_WSBEiJ_G0026165.1 mouse_genomes_project 2 172019533 172042810 - MGP_WSBEiJ_P0058365 Ube2v1 protein_coding protein_coding MGP_WSBEiJ_T0058366.1 MGP_WSBEiJ_G0026165.1 mouse_genomes_project 2 172026826 172042813 - Ube2v1 protein_coding retained_intron MGP_WSBEiJ_T0054800.1 MGP_WSBEiJ_G0025288.1 mouse_genomes_project 2 88520639 88521584 + MGP_WSBEiJ_P0054800 Olfr1148 protein_coding protein_coding MGP_WSBEiJ_T0056283.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125056720 125101067 + MGP_WSBEiJ_P0056283 Sqrdl protein_coding protein_coding MGP_WSBEiJ_T0056284.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125056872 125078716 + MGP_WSBEiJ_P0056284 Sqrdl protein_coding protein_coding MGP_WSBEiJ_T0056285.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125056874 125078723 + MGP_WSBEiJ_P0056285 Sqrdl protein_coding protein_coding MGP_WSBEiJ_T0056286.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125056892 125060026 + Sqrdl protein_coding processed_transcript MGP_WSBEiJ_T0056287.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125064038 125092743 + Sqrdl protein_coding retained_intron MGP_WSBEiJ_T0056288.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125075615 125101051 + MGP_WSBEiJ_P0056288 Sqrdl protein_coding protein_coding MGP_WSBEiJ_T0056289.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125078571 125081591 + Sqrdl protein_coding processed_transcript MGP_WSBEiJ_T0056290.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125078588 125100836 + MGP_WSBEiJ_P0056290 Sqrdl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056291.1 MGP_WSBEiJ_G0025674.1 mouse_genomes_project 2 125091736 125101057 + MGP_WSBEiJ_P0056291 Sqrdl protein_coding protein_coding MGP_WSBEiJ_T0010258.1 MGP_WSBEiJ_G0008415.1 mouse_genomes_project 2 75599388 75599462 + Gm24574 miRNA miRNA MGP_WSBEiJ_T0054792.1 MGP_WSBEiJ_G0025281.1 mouse_genomes_project 2 88400388 88401321 - MGP_WSBEiJ_P0054792 Olfr1135 protein_coding protein_coding MGP_WSBEiJ_T0007115.1 MGP_WSBEiJ_G0005839.1 mouse_genomes_project 2 71522798 71524877 - Gm17250 lincRNA lincRNA MGP_WSBEiJ_T0098135.1 MGP_WSBEiJ_G0036798.1 mouse_genomes_project 2 161556087 161556184 + Gm23463 snRNA snRNA MGP_WSBEiJ_T0007174.1 MGP_WSBEiJ_G0005885.1 mouse_genomes_project 2 104669105 104681370 - BC016548 lincRNA lincRNA MGP_WSBEiJ_T0007175.1 MGP_WSBEiJ_G0005885.1 mouse_genomes_project 2 104676314 104681368 - BC016548 lincRNA lincRNA MGP_WSBEiJ_T0017253.1 MGP_WSBEiJ_G0014880.1 mouse_genomes_project 2 120213297 120241818 - Gm29232 processed_transcript processed_transcript MGP_WSBEiJ_T0056846.1 MGP_WSBEiJ_G0025802.1 mouse_genomes_project 2 135578081 135601854 + MGP_WSBEiJ_P0056846 Crls1 protein_coding protein_coding MGP_WSBEiJ_T0056847.1 MGP_WSBEiJ_G0025802.1 mouse_genomes_project 2 135578091 135599206 + MGP_WSBEiJ_P0056847 Crls1 protein_coding protein_coding MGP_WSBEiJ_T0056848.1 MGP_WSBEiJ_G0025802.1 mouse_genomes_project 2 135578103 135601854 + MGP_WSBEiJ_P0056848 Crls1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056849.1 MGP_WSBEiJ_G0025802.1 mouse_genomes_project 2 135578232 135601849 + MGP_WSBEiJ_P0056849 Crls1 protein_coding protein_coding MGP_WSBEiJ_T0056850.1 MGP_WSBEiJ_G0025802.1 mouse_genomes_project 2 135579153 135600958 + MGP_WSBEiJ_P0056850 Crls1 protein_coding protein_coding MGP_WSBEiJ_T0011296.1 MGP_WSBEiJ_G0009453.1 mouse_genomes_project 2 43810069 43810200 + Gm27761 misc_RNA misc_RNA MGP_WSBEiJ_T0013444.1 MGP_WSBEiJ_G0011574.1 mouse_genomes_project 2 152700727 152701446 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057146.1 MGP_WSBEiJ_G0025882.1 mouse_genomes_project 2 154112251 154120914 - MGP_WSBEiJ_P0057146 Vsx1 protein_coding protein_coding MGP_WSBEiJ_T0056983.1 MGP_WSBEiJ_G0025835.1 mouse_genomes_project 2 147445237 147455747 + MGP_WSBEiJ_P0056983 Mgme1 protein_coding protein_coding MGP_WSBEiJ_T0056984.1 MGP_WSBEiJ_G0025835.1 mouse_genomes_project 2 147445474 147456454 + MGP_WSBEiJ_P0056984 Mgme1 protein_coding protein_coding MGP_WSBEiJ_T0056985.1 MGP_WSBEiJ_G0025835.1 mouse_genomes_project 2 147445515 147455747 + MGP_WSBEiJ_P0056985 Mgme1 protein_coding protein_coding MGP_WSBEiJ_T0054717.1 MGP_WSBEiJ_G0025217.1 mouse_genomes_project 2 86664948 86665893 - MGP_WSBEiJ_P0054717 Olfr1043 protein_coding protein_coding MGP_WSBEiJ_T0007167.1 MGP_WSBEiJ_G0005880.1 mouse_genomes_project 2 100402400 100402885 - Gm29235 lincRNA lincRNA MGP_WSBEiJ_T0052870.1 MGP_WSBEiJ_G0024842.1 mouse_genomes_project 2 29103004 29109061 + MGP_WSBEiJ_P0052870 Tor1b protein_coding protein_coding MGP_WSBEiJ_T0052871.1 MGP_WSBEiJ_G0024842.1 mouse_genomes_project 2 29103024 29109057 + Tor1b protein_coding retained_intron MGP_WSBEiJ_T0052872.1 MGP_WSBEiJ_G0024842.1 mouse_genomes_project 2 29103036 29106540 + MGP_WSBEiJ_P0052872 Tor1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052873.1 MGP_WSBEiJ_G0024842.1 mouse_genomes_project 2 29103217 29107031 + Tor1b protein_coding retained_intron MGP_WSBEiJ_T0052874.1 MGP_WSBEiJ_G0024842.1 mouse_genomes_project 2 29103232 29109058 + MGP_WSBEiJ_P0052874 Tor1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052875.1 MGP_WSBEiJ_G0024842.1 mouse_genomes_project 2 29103797 29106919 + MGP_WSBEiJ_P0052875 Tor1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052876.1 MGP_WSBEiJ_G0024842.1 mouse_genomes_project 2 29105298 29107158 + Tor1b protein_coding processed_transcript MGP_WSBEiJ_T0055613.1 MGP_WSBEiJ_G0025518.1 mouse_genomes_project 2 113259858 113260797 - MGP_WSBEiJ_P0055613 protein_coding protein_coding MGP_WSBEiJ_T0057832.1 MGP_WSBEiJ_G0026036.1 mouse_genomes_project 2 161829631 161878021 - MGP_WSBEiJ_P0057832 Tti1 protein_coding protein_coding MGP_WSBEiJ_T0057833.1 MGP_WSBEiJ_G0026036.1 mouse_genomes_project 2 161829640 161857167 - MGP_WSBEiJ_P0057833 Tti1 protein_coding protein_coding MGP_WSBEiJ_T0057834.1 MGP_WSBEiJ_G0026036.1 mouse_genomes_project 2 161843108 161855017 - Tti1 protein_coding processed_transcript MGP_WSBEiJ_T0057835.1 MGP_WSBEiJ_G0026036.1 mouse_genomes_project 2 161856574 161859890 - MGP_WSBEiJ_P0057835 Tti1 protein_coding protein_coding MGP_WSBEiJ_T0058054.1 MGP_WSBEiJ_G0026096.1 mouse_genomes_project 2 168476708 168479143 - MGP_WSBEiJ_P0058054 Slpi protein_coding protein_coding MGP_WSBEiJ_T0058055.1 MGP_WSBEiJ_G0026096.1 mouse_genomes_project 2 168476800 168478703 - MGP_WSBEiJ_P0058055 Slpi protein_coding protein_coding MGP_WSBEiJ_T0058056.1 MGP_WSBEiJ_G0026096.1 mouse_genomes_project 2 168478230 168516632 - MGP_WSBEiJ_P0058056 Slpi protein_coding protein_coding MGP_WSBEiJ_T0056723.1 MGP_WSBEiJ_G0025777.1 mouse_genomes_project 2 133804161 133817832 - MGP_WSBEiJ_P0056723 1700037H04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056724.1 MGP_WSBEiJ_G0025777.1 mouse_genomes_project 2 133804162 133806866 - 1700037H04Rik protein_coding retained_intron MGP_WSBEiJ_T0056725.1 MGP_WSBEiJ_G0025777.1 mouse_genomes_project 2 133804162 133817818 - MGP_WSBEiJ_P0056725 1700037H04Rik protein_coding protein_coding MGP_WSBEiJ_T0056726.1 MGP_WSBEiJ_G0025777.1 mouse_genomes_project 2 133804631 133817822 - MGP_WSBEiJ_P0056726 1700037H04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056727.1 MGP_WSBEiJ_G0025777.1 mouse_genomes_project 2 133804641 133817879 - MGP_WSBEiJ_P0056727 1700037H04Rik protein_coding protein_coding MGP_WSBEiJ_T0056728.1 MGP_WSBEiJ_G0025777.1 mouse_genomes_project 2 133804998 133817840 - MGP_WSBEiJ_P0056728 1700037H04Rik protein_coding protein_coding MGP_WSBEiJ_T0056729.1 MGP_WSBEiJ_G0025777.1 mouse_genomes_project 2 133806118 133817840 - 1700037H04Rik protein_coding processed_transcript MGP_WSBEiJ_T0013212.1 MGP_WSBEiJ_G0011342.1 mouse_genomes_project 2 59158373 59158767 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013153.1 MGP_WSBEiJ_G0011283.1 mouse_genomes_project 2 37257431 37258037 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007155.1 MGP_WSBEiJ_G0005872.1 mouse_genomes_project 2 93364989 93376300 - Gm13817 lincRNA lincRNA MGP_WSBEiJ_T0007041.1 MGP_WSBEiJ_G0005781.1 mouse_genomes_project 2 16961138 16966538 + 4930447M23Rik lincRNA lincRNA MGP_WSBEiJ_T0007042.1 MGP_WSBEiJ_G0005781.1 mouse_genomes_project 2 16961659 16968952 + 4930447M23Rik lincRNA lincRNA MGP_WSBEiJ_T0007043.1 MGP_WSBEiJ_G0005781.1 mouse_genomes_project 2 16961758 16966272 + 4930447M23Rik lincRNA lincRNA MGP_WSBEiJ_T0007314.1 MGP_WSBEiJ_G0006001.1 mouse_genomes_project 2 176751395 176752396 - Gm14272 lincRNA lincRNA MGP_WSBEiJ_T0010294.1 MGP_WSBEiJ_G0008451.1 mouse_genomes_project 2 141762585 141762664 + Mir1952 miRNA miRNA MGP_WSBEiJ_T0054870.1 MGP_WSBEiJ_G0025350.1 mouse_genomes_project 2 90242442 90243360 - MGP_WSBEiJ_P0054870 Olfr1239 protein_coding protein_coding MGP_WSBEiJ_T0010265.1 MGP_WSBEiJ_G0008422.1 mouse_genomes_project 2 92732912 92732973 - Mir6999 miRNA miRNA MGP_WSBEiJ_T0017337.1 MGP_WSBEiJ_G0014920.1 mouse_genomes_project 2 185939428 185952538 - Gm14343 processed_transcript processed_transcript MGP_WSBEiJ_T0013451.1 MGP_WSBEiJ_G0011581.1 mouse_genomes_project 2 155257134 155258272 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057393.1 MGP_WSBEiJ_G0025956.1 mouse_genomes_project 2 157751578 157757922 + MGP_WSBEiJ_P0057393 Bpifa1 protein_coding protein_coding MGP_WSBEiJ_T0057394.1 MGP_WSBEiJ_G0025956.1 mouse_genomes_project 2 157751597 157753881 + Bpifa1 protein_coding processed_transcript MGP_WSBEiJ_T0057395.1 MGP_WSBEiJ_G0025956.1 mouse_genomes_project 2 157753052 157756444 + Bpifa1 protein_coding processed_transcript MGP_WSBEiJ_T0100733.1 MGP_WSBEiJ_G0039191.1 mouse_genomes_project 2 91095199 91109903 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011326.1 MGP_WSBEiJ_G0009483.1 mouse_genomes_project 2 179234363 179234485 + Gm27869 misc_RNA misc_RNA MGP_WSBEiJ_T0058162.1 MGP_WSBEiJ_G0026130.1 mouse_genomes_project 2 169062917 169068035 + Pcif1 protein_coding retained_intron MGP_WSBEiJ_T0058163.1 MGP_WSBEiJ_G0026130.1 mouse_genomes_project 2 169062978 169079302 + MGP_WSBEiJ_P0058163 Pcif1 protein_coding protein_coding MGP_WSBEiJ_T0058164.1 MGP_WSBEiJ_G0026130.1 mouse_genomes_project 2 169063665 169067946 + Pcif1 protein_coding retained_intron MGP_WSBEiJ_T0058165.1 MGP_WSBEiJ_G0026130.1 mouse_genomes_project 2 169068768 169069530 + Pcif1 protein_coding retained_intron MGP_WSBEiJ_T0056254.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570195 124589475 - MGP_WSBEiJ_P0056254 protein_coding protein_coding MGP_WSBEiJ_T0056255.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570196 124591559 - MGP_WSBEiJ_P0056255 protein_coding protein_coding MGP_WSBEiJ_T0056256.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570431 124591473 - MGP_WSBEiJ_P0056256 protein_coding protein_coding MGP_WSBEiJ_T0056257.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570431 124591803 - MGP_WSBEiJ_P0056257 protein_coding protein_coding MGP_WSBEiJ_T0056258.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570431 124582195 - MGP_WSBEiJ_P0056258 protein_coding protein_coding MGP_WSBEiJ_T0056259.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570502 124580851 - MGP_WSBEiJ_P0056259 protein_coding protein_coding MGP_WSBEiJ_T0056260.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570502 124580877 - MGP_WSBEiJ_P0056260 protein_coding protein_coding MGP_WSBEiJ_T0056261.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570656 124591773 - MGP_WSBEiJ_P0056261 protein_coding protein_coding MGP_WSBEiJ_T0056262.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570691 124579831 - MGP_WSBEiJ_P0056262 protein_coding protein_coding MGP_WSBEiJ_T0056263.1 MGP_WSBEiJ_G0025667.1 mouse_genomes_project 2 124570807 124576724 - protein_coding retained_intron MGP_WSBEiJ_T0017196.1 MGP_WSBEiJ_G0014848.1 mouse_genomes_project 2 71524639 71534493 + Gm13662 processed_transcript processed_transcript MGP_WSBEiJ_T0058197.1 MGP_WSBEiJ_G0026137.1 mouse_genomes_project 2 169327241 169454410 - MGP_WSBEiJ_P0058197 Cdh22 protein_coding protein_coding MGP_WSBEiJ_T0058198.1 MGP_WSBEiJ_G0026137.1 mouse_genomes_project 2 169328061 169400186 - MGP_WSBEiJ_P0058198 Cdh22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013082.1 MGP_WSBEiJ_G0011212.1 mouse_genomes_project 2 8940412 8941675 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013281.1 MGP_WSBEiJ_G0011411.1 mouse_genomes_project 2 84513586 84514411 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053250.1 MGP_WSBEiJ_G0024898.1 mouse_genomes_project 2 31725799 31751651 - MGP_WSBEiJ_P0053250 Zbtb34 protein_coding protein_coding MGP_WSBEiJ_T0053251.1 MGP_WSBEiJ_G0024898.1 mouse_genomes_project 2 31725799 31748549 - MGP_WSBEiJ_P0053251 Zbtb34 protein_coding protein_coding MGP_WSBEiJ_T0053252.1 MGP_WSBEiJ_G0024898.1 mouse_genomes_project 2 31731610 31751644 - Zbtb34 protein_coding processed_transcript MGP_WSBEiJ_T0057200.1 MGP_WSBEiJ_G0025892.1 mouse_genomes_project 2 155086385 155110611 - MGP_WSBEiJ_P0057200 Rad21l protein_coding protein_coding MGP_WSBEiJ_T0057201.1 MGP_WSBEiJ_G0025892.1 mouse_genomes_project 2 155086385 155112395 - MGP_WSBEiJ_P0057201 Rad21l protein_coding unknown_likely_coding MGP_WSBEiJ_T0057202.1 MGP_WSBEiJ_G0025892.1 mouse_genomes_project 2 155086385 155110611 - MGP_WSBEiJ_P0057202 Rad21l protein_coding protein_coding MGP_WSBEiJ_T0058457.1 MGP_WSBEiJ_G0026188.1 mouse_genomes_project 2 176792779 176800006 - MGP_WSBEiJ_P0058457 Cbln4 protein_coding protein_coding MGP_WSBEiJ_T0013174.1 MGP_WSBEiJ_G0011304.1 mouse_genomes_project 2 46925167 46925600 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099402.1 MGP_WSBEiJ_G0038065.1 mouse_genomes_project 2 163055247 163055379 + Gm25090 snoRNA snoRNA MGP_WSBEiJ_T0054798.1 MGP_WSBEiJ_G0025286.1 mouse_genomes_project 2 88490083 88491028 + MGP_WSBEiJ_P0054798 Olfr1143 protein_coding protein_coding MGP_WSBEiJ_T0010324.1 MGP_WSBEiJ_G0008481.1 mouse_genomes_project 2 185548202 185548306 + Mir133a-2 miRNA miRNA MGP_WSBEiJ_T0057746.1 MGP_WSBEiJ_G0026020.1 mouse_genomes_project 2 160628193 160642715 - MGP_WSBEiJ_P0057746 Sla2 protein_coding protein_coding MGP_WSBEiJ_T0057748.1 MGP_WSBEiJ_G0026020.1 mouse_genomes_project 2 160628658 160642829 - MGP_WSBEiJ_P0057748 Sla2 protein_coding protein_coding MGP_WSBEiJ_T0056055.1 MGP_WSBEiJ_G0025626.1 mouse_genomes_project 2 122942946 123057405 - MGP_WSBEiJ_P0056055 Ubr1 protein_coding protein_coding MGP_WSBEiJ_T0056056.1 MGP_WSBEiJ_G0025626.1 mouse_genomes_project 2 122945251 122954237 - Ubr1 protein_coding processed_transcript MGP_WSBEiJ_T0056057.1 MGP_WSBEiJ_G0025626.1 mouse_genomes_project 2 122955760 122975345 - Ubr1 protein_coding processed_transcript MGP_WSBEiJ_T0056058.1 MGP_WSBEiJ_G0025626.1 mouse_genomes_project 2 122987096 122999810 - Ubr1 protein_coding processed_transcript MGP_WSBEiJ_T0056059.1 MGP_WSBEiJ_G0025626.1 mouse_genomes_project 2 123006421 123015830 - Ubr1 protein_coding processed_transcript MGP_WSBEiJ_T0056060.1 MGP_WSBEiJ_G0025626.1 mouse_genomes_project 2 123030893 123057303 - Ubr1 protein_coding retained_intron MGP_WSBEiJ_T0056061.1 MGP_WSBEiJ_G0025626.1 mouse_genomes_project 2 123048843 123057382 - Ubr1 protein_coding retained_intron MGP_WSBEiJ_T0055989.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122532605 122586900 + Capn3 protein_coding processed_transcript MGP_WSBEiJ_T0055990.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122532605 122586760 + Capn3 protein_coding processed_transcript MGP_WSBEiJ_T0055991.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122542517 122586900 + MGP_WSBEiJ_P0055991 Capn3 protein_coding protein_coding MGP_WSBEiJ_T0055992.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122542517 122586900 + MGP_WSBEiJ_P0055992 Capn3 protein_coding protein_coding MGP_WSBEiJ_T0055993.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122542811 122586486 + MGP_WSBEiJ_P0055993 Capn3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055994.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122557029 122586900 + MGP_WSBEiJ_P0055994 Capn3 protein_coding protein_coding MGP_WSBEiJ_T0055995.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122557031 122586900 + MGP_WSBEiJ_P0055995 Capn3 protein_coding protein_coding MGP_WSBEiJ_T0055996.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122557081 122586900 + MGP_WSBEiJ_P0055996 Capn3 protein_coding protein_coding MGP_WSBEiJ_T0055997.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122557087 122586501 + Capn3 protein_coding processed_transcript MGP_WSBEiJ_T0055998.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122557087 122586900 + MGP_WSBEiJ_P0055998 Capn3 protein_coding protein_coding MGP_WSBEiJ_T0055999.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122565297 122565572 + Capn3 protein_coding processed_transcript MGP_WSBEiJ_T0056000.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122582235 122585204 + Capn3 protein_coding processed_transcript MGP_WSBEiJ_T0056001.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122583219 122585029 + Capn3 protein_coding processed_transcript MGP_WSBEiJ_T0056002.1 MGP_WSBEiJ_G0025618.1 mouse_genomes_project 2 122583293 122585382 + Capn3 protein_coding processed_transcript MGP_WSBEiJ_T0010317.1 MGP_WSBEiJ_G0008474.1 mouse_genomes_project 2 178592875 178592994 - Mir6340 miRNA miRNA MGP_WSBEiJ_T0013250.1 MGP_WSBEiJ_G0011380.1 mouse_genomes_project 2 74794578 74795213 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100737.1 MGP_WSBEiJ_G0039195.1 mouse_genomes_project 2 111044556 111069497 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013231.1 MGP_WSBEiJ_G0011361.1 mouse_genomes_project 2 67628072 67628611 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054569.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84828545 84875350 - MGP_WSBEiJ_P0054569 Tfpi protein_coding protein_coding MGP_WSBEiJ_T0054570.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84828545 84876851 - MGP_WSBEiJ_P0054570 Tfpi protein_coding protein_coding MGP_WSBEiJ_T0054571.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84828550 84830387 - Tfpi protein_coding processed_transcript MGP_WSBEiJ_T0054572.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84828550 84875740 - MGP_WSBEiJ_P0054572 Tfpi protein_coding protein_coding MGP_WSBEiJ_T0054573.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84835882 84881391 - MGP_WSBEiJ_P0054573 Tfpi protein_coding protein_coding MGP_WSBEiJ_T0054574.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84835882 84881403 - MGP_WSBEiJ_P0054574 Tfpi protein_coding protein_coding MGP_WSBEiJ_T0054575.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84835882 84881376 - MGP_WSBEiJ_P0054575 Tfpi protein_coding protein_coding MGP_WSBEiJ_T0054576.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84835882 84859172 - MGP_WSBEiJ_P0054576 Tfpi protein_coding protein_coding MGP_WSBEiJ_T0054577.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84836465 84875369 - MGP_WSBEiJ_P0054577 Tfpi protein_coding protein_coding MGP_WSBEiJ_T0054578.1 MGP_WSBEiJ_G0025160.1 mouse_genomes_project 2 84839811 84875365 - Tfpi protein_coding processed_transcript MGP_WSBEiJ_T0007212.1 MGP_WSBEiJ_G0005915.1 mouse_genomes_project 2 127107814 127110261 + Gm13994 lincRNA lincRNA MGP_WSBEiJ_T0055338.1 MGP_WSBEiJ_G0025447.1 mouse_genomes_project 2 103181702 103423049 - MGP_WSBEiJ_P0055338 Ldlrad3 protein_coding protein_coding MGP_WSBEiJ_T0055339.1 MGP_WSBEiJ_G0025447.1 mouse_genomes_project 2 103181702 103423022 - MGP_WSBEiJ_P0055339 Ldlrad3 protein_coding protein_coding MGP_WSBEiJ_T0055340.1 MGP_WSBEiJ_G0025447.1 mouse_genomes_project 2 103347237 103374339 - Ldlrad3 protein_coding processed_transcript MGP_WSBEiJ_T0057476.1 MGP_WSBEiJ_G0025979.1 mouse_genomes_project 2 158915090 158929021 + Dynlrb1 protein_coding processed_transcript MGP_WSBEiJ_T0057477.1 MGP_WSBEiJ_G0025979.1 mouse_genomes_project 2 158915092 158929026 + MGP_WSBEiJ_P0057477 Dynlrb1 protein_coding protein_coding MGP_WSBEiJ_T0057478.1 MGP_WSBEiJ_G0025979.1 mouse_genomes_project 2 158915165 158928884 + MGP_WSBEiJ_P0057478 Dynlrb1 protein_coding protein_coding MGP_WSBEiJ_T0057479.1 MGP_WSBEiJ_G0025979.1 mouse_genomes_project 2 158915368 158928829 + Dynlrb1 protein_coding processed_transcript MGP_WSBEiJ_T0011323.1 MGP_WSBEiJ_G0009480.1 mouse_genomes_project 2 171007033 171007380 + Gm25265 misc_RNA misc_RNA MGP_WSBEiJ_T0007239.1 MGP_WSBEiJ_G0005938.1 mouse_genomes_project 2 150076646 150090415 - Gm14114 lincRNA lincRNA MGP_WSBEiJ_T0011311.1 MGP_WSBEiJ_G0009468.1 mouse_genomes_project 2 118869802 118870115 + Gm24914 misc_RNA misc_RNA MGP_WSBEiJ_T0007316.1 MGP_WSBEiJ_G0006003.1 mouse_genomes_project 2 177074164 177075690 + lincRNA lincRNA MGP_WSBEiJ_T0057258.1 MGP_WSBEiJ_G0025917.1 mouse_genomes_project 2 156067350 156069551 + MGP_WSBEiJ_P0057258 Defb21 protein_coding protein_coding MGP_WSBEiJ_T0010271.1 MGP_WSBEiJ_G0008428.1 mouse_genomes_project 2 95098803 95098907 - Gm23630 miRNA miRNA MGP_WSBEiJ_T0100746.1 MGP_WSBEiJ_G0039204.1 mouse_genomes_project 2 157651307 157655665 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0056913.1 MGP_WSBEiJ_G0025817.1 mouse_genomes_project 2 141185545 141458822 + Btbd3 protein_coding processed_transcript MGP_WSBEiJ_T0056914.1 MGP_WSBEiJ_G0025817.1 mouse_genomes_project 2 141185553 141504844 + Btbd3 protein_coding processed_transcript MGP_WSBEiJ_T0056915.1 MGP_WSBEiJ_G0025817.1 mouse_genomes_project 2 141207760 141216281 + MGP_WSBEiJ_P0056915 Btbd3 protein_coding protein_coding MGP_WSBEiJ_T0013391.1 MGP_WSBEiJ_G0011521.1 mouse_genomes_project 2 131952630 131952731 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058679.1 MGP_WSBEiJ_G0026251.1 mouse_genomes_project 2 186101146 186117626 - MGP_WSBEiJ_P0058679 Ythdf1 protein_coding protein_coding MGP_WSBEiJ_T0058680.1 MGP_WSBEiJ_G0026251.1 mouse_genomes_project 2 186102139 186117626 - MGP_WSBEiJ_P0058680 Ythdf1 protein_coding protein_coding MGP_WSBEiJ_T0058681.1 MGP_WSBEiJ_G0026251.1 mouse_genomes_project 2 186108440 186117064 - MGP_WSBEiJ_P0058681 Ythdf1 protein_coding protein_coding MGP_WSBEiJ_T0057322.1 MGP_WSBEiJ_G0025936.1 mouse_genomes_project 2 156631984 156674992 + MGP_WSBEiJ_P0057322 Hck protein_coding protein_coding MGP_WSBEiJ_T0057323.1 MGP_WSBEiJ_G0025936.1 mouse_genomes_project 2 156631984 156674994 + MGP_WSBEiJ_P0057323 Hck protein_coding protein_coding MGP_WSBEiJ_T0013443.1 MGP_WSBEiJ_G0011573.1 mouse_genomes_project 2 152677234 152678951 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013484.1 MGP_WSBEiJ_G0011614.1 mouse_genomes_project 2 165286996 165287446 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051565.1 MGP_WSBEiJ_G0024616.1 mouse_genomes_project 2 9467489 9670002 - MGP_WSBEiJ_P0051565 Itga8 protein_coding protein_coding MGP_WSBEiJ_T0051566.1 MGP_WSBEiJ_G0024616.1 mouse_genomes_project 2 9468336 9669972 - MGP_WSBEiJ_P0051566 Itga8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051567.1 MGP_WSBEiJ_G0024616.1 mouse_genomes_project 2 9469927 9494138 - MGP_WSBEiJ_P0051567 Itga8 protein_coding protein_coding MGP_WSBEiJ_T0051568.1 MGP_WSBEiJ_G0024616.1 mouse_genomes_project 2 9546326 9556983 - Itga8 protein_coding retained_intron MGP_WSBEiJ_T0051569.1 MGP_WSBEiJ_G0024616.1 mouse_genomes_project 2 9587626 9610810 - Itga8 protein_coding processed_transcript MGP_WSBEiJ_T0051570.1 MGP_WSBEiJ_G0024616.1 mouse_genomes_project 2 9618172 9670002 - Itga8 protein_coding retained_intron MGP_WSBEiJ_T0051571.1 MGP_WSBEiJ_G0024616.1 mouse_genomes_project 2 9655097 9669668 - Itga8 protein_coding processed_transcript MGP_WSBEiJ_T0058106.1 MGP_WSBEiJ_G0026116.1 mouse_genomes_project 2 168874621 168878578 + MGP_WSBEiJ_P0058106 Spint4 protein_coding protein_coding MGP_WSBEiJ_T0056474.1 MGP_WSBEiJ_G0025717.1 mouse_genomes_project 2 130075407 130087834 - MGP_WSBEiJ_P0056474 Zfp661 protein_coding protein_coding MGP_WSBEiJ_T0056475.1 MGP_WSBEiJ_G0025717.1 mouse_genomes_project 2 130076280 130085409 - MGP_WSBEiJ_P0056475 Zfp661 protein_coding protein_coding MGP_WSBEiJ_T0056476.1 MGP_WSBEiJ_G0025717.1 mouse_genomes_project 2 130076287 130085417 - MGP_WSBEiJ_P0056476 Zfp661 protein_coding protein_coding MGP_WSBEiJ_T0056477.1 MGP_WSBEiJ_G0025717.1 mouse_genomes_project 2 130077681 130082256 - MGP_WSBEiJ_P0056477 Zfp661 protein_coding protein_coding MGP_WSBEiJ_T0053449.1 MGP_WSBEiJ_G0024935.1 mouse_genomes_project 2 35129143 35130073 + MGP_WSBEiJ_P0053449 Olfr339 protein_coding protein_coding MGP_WSBEiJ_T0013480.1 MGP_WSBEiJ_G0011610.1 mouse_genomes_project 2 163709071 163709603 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058820.1 MGP_WSBEiJ_G0026274.1 mouse_genomes_project 2 186735858 186773829 + MGP_WSBEiJ_P0058820 Dnajc5 protein_coding protein_coding MGP_WSBEiJ_T0058821.1 MGP_WSBEiJ_G0026274.1 mouse_genomes_project 2 186735899 186770931 + MGP_WSBEiJ_P0058821 Dnajc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058822.1 MGP_WSBEiJ_G0026274.1 mouse_genomes_project 2 186735924 186770929 + MGP_WSBEiJ_P0058822 Dnajc5 protein_coding protein_coding MGP_WSBEiJ_T0058823.1 MGP_WSBEiJ_G0026274.1 mouse_genomes_project 2 186736185 186767469 + MGP_WSBEiJ_P0058823 Dnajc5 protein_coding protein_coding MGP_WSBEiJ_T0058824.1 MGP_WSBEiJ_G0026274.1 mouse_genomes_project 2 186736320 186768287 + MGP_WSBEiJ_P0058824 Dnajc5 protein_coding protein_coding MGP_WSBEiJ_T0058825.1 MGP_WSBEiJ_G0026274.1 mouse_genomes_project 2 186768022 186768955 + Dnajc5 protein_coding processed_transcript MGP_WSBEiJ_T0056404.1 MGP_WSBEiJ_G0025700.1 mouse_genomes_project 2 129347568 129394281 - MGP_WSBEiJ_P0056404 Sppl2a protein_coding protein_coding MGP_WSBEiJ_T0056405.1 MGP_WSBEiJ_G0025700.1 mouse_genomes_project 2 129351445 129381430 - MGP_WSBEiJ_P0056405 Sppl2a protein_coding protein_coding MGP_WSBEiJ_T0056406.1 MGP_WSBEiJ_G0025700.1 mouse_genomes_project 2 129375964 129384755 - Sppl2a protein_coding retained_intron MGP_WSBEiJ_T0098120.1 MGP_WSBEiJ_G0036783.1 mouse_genomes_project 2 123229573 123229679 - Gm23858 snRNA snRNA MGP_WSBEiJ_T0058445.1 MGP_WSBEiJ_G0026183.1 mouse_genomes_project 2 174989915 175081639 - MGP_WSBEiJ_P0058445 Bcas1 protein_coding protein_coding MGP_WSBEiJ_T0058446.1 MGP_WSBEiJ_G0026183.1 mouse_genomes_project 2 174990067 175081639 - MGP_WSBEiJ_P0058446 Bcas1 protein_coding protein_coding MGP_WSBEiJ_T0058447.1 MGP_WSBEiJ_G0026183.1 mouse_genomes_project 2 174990854 175006043 - Bcas1 protein_coding processed_transcript MGP_WSBEiJ_T0058448.1 MGP_WSBEiJ_G0026183.1 mouse_genomes_project 2 174990997 175074462 - MGP_WSBEiJ_P0058448 Bcas1 protein_coding protein_coding MGP_WSBEiJ_T0058449.1 MGP_WSBEiJ_G0026183.1 mouse_genomes_project 2 174991012 175006098 - Bcas1 protein_coding processed_transcript MGP_WSBEiJ_T0058450.1 MGP_WSBEiJ_G0026183.1 mouse_genomes_project 2 175034102 175035135 - Bcas1 protein_coding processed_transcript MGP_WSBEiJ_T0058451.1 MGP_WSBEiJ_G0026183.1 mouse_genomes_project 2 175046500 175081639 - Bcas1 protein_coding processed_transcript MGP_WSBEiJ_T0007201.1 MGP_WSBEiJ_G0005906.1 mouse_genomes_project 2 119741539 119743085 - Gm28183 lincRNA lincRNA MGP_WSBEiJ_T0058017.1 MGP_WSBEiJ_G0026077.1 mouse_genomes_project 2 167815165 167840592 - MGP_WSBEiJ_P0058017 Ada protein_coding protein_coding MGP_WSBEiJ_T0058018.1 MGP_WSBEiJ_G0026077.1 mouse_genomes_project 2 167818605 167819457 - Ada protein_coding processed_transcript MGP_WSBEiJ_T0058023.1 MGP_WSBEiJ_G0026080.1 mouse_genomes_project 2 167943956 168006524 - MGP_WSBEiJ_P0058023 Rims4 protein_coding protein_coding MGP_WSBEiJ_T0010292.1 MGP_WSBEiJ_G0008449.1 mouse_genomes_project 2 133947894 133947980 + Mir103-2 miRNA miRNA MGP_WSBEiJ_T0052564.1 MGP_WSBEiJ_G0024799.1 mouse_genomes_project 2 26806750 26813856 + Ddx31 protein_coding processed_transcript MGP_WSBEiJ_T0052565.1 MGP_WSBEiJ_G0024799.1 mouse_genomes_project 2 26806803 26872951 + MGP_WSBEiJ_P0052565 Ddx31 protein_coding protein_coding MGP_WSBEiJ_T0052566.1 MGP_WSBEiJ_G0024799.1 mouse_genomes_project 2 26811246 26822568 + Ddx31 protein_coding processed_transcript MGP_WSBEiJ_T0052567.1 MGP_WSBEiJ_G0024799.1 mouse_genomes_project 2 26823477 26826414 + Ddx31 protein_coding processed_transcript MGP_WSBEiJ_T0003943.1 MGP_WSBEiJ_G0003511.1 mouse_genomes_project 2 76715249 76779275 + Gm13938 antisense antisense MGP_WSBEiJ_T0053121.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30868136 30889906 + MGP_WSBEiJ_P0053121 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0053122.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30868153 30888959 + MGP_WSBEiJ_P0053122 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0053123.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30876543 30891190 + MGP_WSBEiJ_P0053123 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0053124.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30876578 30891183 + MGP_WSBEiJ_P0053124 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0053125.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30876592 30891183 + MGP_WSBEiJ_P0053125 St6galnac6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053126.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30877623 30891181 + MGP_WSBEiJ_P0053126 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0053127.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30877637 30887198 + St6galnac6 protein_coding retained_intron MGP_WSBEiJ_T0053128.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30878016 30891181 + MGP_WSBEiJ_P0053128 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0053129.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30878269 30881880 + MGP_WSBEiJ_P0053129 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0053130.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30878565 30885358 + MGP_WSBEiJ_P0053130 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0053131.1 MGP_WSBEiJ_G0024879.1 mouse_genomes_project 2 30878595 30885378 + MGP_WSBEiJ_P0053131 St6galnac6 protein_coding protein_coding MGP_WSBEiJ_T0057127.1 MGP_WSBEiJ_G0025876.1 mouse_genomes_project 2 153176754 153250630 + MGP_WSBEiJ_P0057127 Syndig1 protein_coding protein_coding MGP_WSBEiJ_T0057129.1 MGP_WSBEiJ_G0025876.1 mouse_genomes_project 2 153178331 153351713 + MGP_WSBEiJ_P0057129 Syndig1 protein_coding protein_coding MGP_WSBEiJ_T0057130.1 MGP_WSBEiJ_G0025876.1 mouse_genomes_project 2 153178412 153250671 + MGP_WSBEiJ_P0057130 Syndig1 protein_coding protein_coding MGP_WSBEiJ_T0057131.1 MGP_WSBEiJ_G0025876.1 mouse_genomes_project 2 153178444 153250667 + MGP_WSBEiJ_P0057131 Syndig1 protein_coding protein_coding MGP_WSBEiJ_T0057132.1 MGP_WSBEiJ_G0025876.1 mouse_genomes_project 2 153178465 153250797 + MGP_WSBEiJ_P0057132 Syndig1 protein_coding protein_coding MGP_WSBEiJ_T0057133.1 MGP_WSBEiJ_G0025876.1 mouse_genomes_project 2 153247261 153351713 + MGP_WSBEiJ_P0057133 Syndig1 protein_coding protein_coding MGP_WSBEiJ_T0054252.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71766063 72058167 + MGP_WSBEiJ_P0054252 Rapgef4 protein_coding protein_coding MGP_WSBEiJ_T0054253.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71766070 71826261 + Rapgef4 protein_coding processed_transcript MGP_WSBEiJ_T0054254.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71766082 71934650 + Rapgef4 protein_coding processed_transcript MGP_WSBEiJ_T0054255.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71766110 72057069 + MGP_WSBEiJ_P0054255 Rapgef4 protein_coding protein_coding MGP_WSBEiJ_T0054256.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71847450 72058165 + MGP_WSBEiJ_P0054256 Rapgef4 protein_coding protein_coding MGP_WSBEiJ_T0054257.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71847843 71934826 + Rapgef4 protein_coding processed_transcript MGP_WSBEiJ_T0054258.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71934061 71993475 + Rapgef4 protein_coding processed_transcript MGP_WSBEiJ_T0054259.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71934078 71957672 + Rapgef4 protein_coding processed_transcript MGP_WSBEiJ_T0054260.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71974910 72058165 + Rapgef4 protein_coding processed_transcript MGP_WSBEiJ_T0054261.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 71996013 72005634 + Rapgef4 protein_coding processed_transcript MGP_WSBEiJ_T0054262.1 MGP_WSBEiJ_G0025092.1 mouse_genomes_project 2 72042105 72057348 + Rapgef4 protein_coding processed_transcript MGP_WSBEiJ_T0056085.1 MGP_WSBEiJ_G0025632.1 mouse_genomes_project 2 123222797 123235708 - MGP_WSBEiJ_P0056085 Lcmt2 protein_coding protein_coding MGP_WSBEiJ_T0056086.1 MGP_WSBEiJ_G0025632.1 mouse_genomes_project 2 123232927 123235983 - MGP_WSBEiJ_P0056086 Lcmt2 protein_coding protein_coding MGP_WSBEiJ_T0013465.1 MGP_WSBEiJ_G0011595.1 mouse_genomes_project 2 159777309 159777852 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052646.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914375 27926206 + MGP_WSBEiJ_P0052646 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052647.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914388 27917731 + Odf2 protein_coding retained_intron MGP_WSBEiJ_T0052648.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914874 27949717 + MGP_WSBEiJ_P0052648 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052649.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914939 27949717 + MGP_WSBEiJ_P0052649 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052650.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914949 27958998 + MGP_WSBEiJ_P0052650 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052651.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914949 27958348 + MGP_WSBEiJ_P0052651 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052652.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914952 27958348 + MGP_WSBEiJ_P0052652 Odf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052653.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914965 27927375 + Odf2 protein_coding processed_transcript MGP_WSBEiJ_T0052654.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914969 27927345 + MGP_WSBEiJ_P0052654 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052655.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914971 27958998 + MGP_WSBEiJ_P0052655 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052656.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914972 27949717 + MGP_WSBEiJ_P0052656 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052657.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914979 27926592 + Odf2 protein_coding retained_intron MGP_WSBEiJ_T0052658.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27914988 27929176 + MGP_WSBEiJ_P0052658 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052659.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27915049 27958999 + MGP_WSBEiJ_P0052659 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052660.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27915217 27949717 + MGP_WSBEiJ_P0052660 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052661.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27915237 27916145 + Odf2 protein_coding processed_transcript MGP_WSBEiJ_T0052662.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27915297 27949717 + MGP_WSBEiJ_P0052662 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052663.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27915310 27958348 + MGP_WSBEiJ_P0052663 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052664.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27915694 27949714 + MGP_WSBEiJ_P0052664 Odf2 protein_coding protein_coding MGP_WSBEiJ_T0052665.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27917150 27926220 + Odf2 protein_coding processed_transcript MGP_WSBEiJ_T0052666.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27928640 27940516 + Odf2 protein_coding processed_transcript MGP_WSBEiJ_T0052667.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27928671 27940957 + Odf2 protein_coding processed_transcript MGP_WSBEiJ_T0052668.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27938270 27940920 + Odf2 protein_coding retained_intron MGP_WSBEiJ_T0052669.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27940036 27944838 + Odf2 protein_coding retained_intron MGP_WSBEiJ_T0052670.1 MGP_WSBEiJ_G0024813.1 mouse_genomes_project 2 27952649 27953923 + Odf2 protein_coding retained_intron MGP_WSBEiJ_T0097172.1 MGP_WSBEiJ_G0035853.1 mouse_genomes_project 2 134074484 134074786 - Gm22902 ribozyme ribozyme MGP_WSBEiJ_T0003845.1 MGP_WSBEiJ_G0003437.1 mouse_genomes_project 2 23483135 23490939 - antisense antisense MGP_WSBEiJ_T0003846.1 MGP_WSBEiJ_G0003437.1 mouse_genomes_project 2 23483792 23485551 - antisense antisense MGP_WSBEiJ_T0054891.1 MGP_WSBEiJ_G0025365.1 mouse_genomes_project 2 90653770 90659426 - MGP_WSBEiJ_P0054891 Olfr1256 protein_coding protein_coding MGP_WSBEiJ_T0054892.1 MGP_WSBEiJ_G0025365.1 mouse_genomes_project 2 90653770 90654691 - MGP_WSBEiJ_P0054892 Olfr1256 protein_coding protein_coding MGP_WSBEiJ_T0100059.1 MGP_WSBEiJ_G0038677.1 mouse_genomes_project 2 74757484 74758090 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0097028.1 MGP_WSBEiJ_G0035709.1 mouse_genomes_project 2 107423586 107423702 + n-R5s201 rRNA rRNA MGP_WSBEiJ_T0057984.1 MGP_WSBEiJ_G0026068.1 mouse_genomes_project 2 167410881 167472956 - MGP_WSBEiJ_P0057984 Jph2 protein_coding protein_coding MGP_WSBEiJ_T0057985.1 MGP_WSBEiJ_G0026068.1 mouse_genomes_project 2 167410881 167473000 - MGP_WSBEiJ_P0057985 Jph2 protein_coding protein_coding MGP_WSBEiJ_T0013072.1 MGP_WSBEiJ_G0011202.1 mouse_genomes_project 2 5830360 5830905 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013344.1 MGP_WSBEiJ_G0011474.1 mouse_genomes_project 2 107443598 107443754 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054803.1 MGP_WSBEiJ_G0025291.1 mouse_genomes_project 2 88578124 88579081 + MGP_WSBEiJ_P0054803 Olfr1153 protein_coding protein_coding MGP_WSBEiJ_T0010256.1 MGP_WSBEiJ_G0008413.1 mouse_genomes_project 2 74586993 74587130 - Gm44463 miRNA miRNA MGP_WSBEiJ_T0057376.1 MGP_WSBEiJ_G0025950.1 mouse_genomes_project 2 157499839 157512248 + MGP_WSBEiJ_P0057376 Bpifb6 protein_coding protein_coding MGP_WSBEiJ_T0057377.1 MGP_WSBEiJ_G0025950.1 mouse_genomes_project 2 157499846 157506374 + MGP_WSBEiJ_P0057377 Bpifb6 protein_coding protein_coding MGP_WSBEiJ_T0013238.1 MGP_WSBEiJ_G0011368.1 mouse_genomes_project 2 70302291 70302540 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055216.1 MGP_WSBEiJ_G0025425.1 mouse_genomes_project 2 93826014 93910682 - MGP_WSBEiJ_P0055216 Prdm11 protein_coding protein_coding MGP_WSBEiJ_T0055217.1 MGP_WSBEiJ_G0025425.1 mouse_genomes_project 2 93837154 93911255 - MGP_WSBEiJ_P0055217 Prdm11 protein_coding protein_coding MGP_WSBEiJ_T0055218.1 MGP_WSBEiJ_G0025425.1 mouse_genomes_project 2 93846945 93911164 - MGP_WSBEiJ_P0055218 Prdm11 protein_coding protein_coding MGP_WSBEiJ_T0055219.1 MGP_WSBEiJ_G0025425.1 mouse_genomes_project 2 93873450 93878360 - Prdm11 protein_coding processed_transcript MGP_WSBEiJ_T0055220.1 MGP_WSBEiJ_G0025425.1 mouse_genomes_project 2 93877067 93911278 - MGP_WSBEiJ_P0055220 Prdm11 protein_coding protein_coding MGP_WSBEiJ_T0051710.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15779233 15803840 - MGP_WSBEiJ_P0051710 Dnajc1 protein_coding protein_coding MGP_WSBEiJ_T0051711.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15789911 15981341 - MGP_WSBEiJ_P0051711 Dnajc1 protein_coding protein_coding MGP_WSBEiJ_T0051712.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15792803 15801185 - Dnajc1 protein_coding processed_transcript MGP_WSBEiJ_T0051713.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15798031 15981360 - MGP_WSBEiJ_P0051713 Dnajc1 protein_coding protein_coding MGP_WSBEiJ_T0051714.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15801417 15980950 - MGP_WSBEiJ_P0051714 Dnajc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051715.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15801417 15981172 - MGP_WSBEiJ_P0051715 Dnajc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051716.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15801437 15980951 - MGP_WSBEiJ_P0051716 Dnajc1 protein_coding protein_coding MGP_WSBEiJ_T0051717.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15803813 15890267 - MGP_WSBEiJ_P0051717 Dnajc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051718.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15889888 15893508 - Dnajc1 protein_coding retained_intron MGP_WSBEiJ_T0051719.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15891835 15981354 - Dnajc1 protein_coding processed_transcript MGP_WSBEiJ_T0051720.1 MGP_WSBEiJ_G0024641.1 mouse_genomes_project 2 15900560 15981360 - Dnajc1 protein_coding retained_intron MGP_WSBEiJ_T0053276.1 MGP_WSBEiJ_G0024903.1 mouse_genomes_project 2 32769505 32864468 + MGP_WSBEiJ_P0053276 Mapkap1 protein_coding protein_coding MGP_WSBEiJ_T0053277.1 MGP_WSBEiJ_G0024903.1 mouse_genomes_project 2 32769603 32796505 + MGP_WSBEiJ_P0053277 Mapkap1 protein_coding protein_coding MGP_WSBEiJ_T0053278.1 MGP_WSBEiJ_G0024903.1 mouse_genomes_project 2 32769606 32844275 + Mapkap1 protein_coding processed_transcript MGP_WSBEiJ_T0053279.1 MGP_WSBEiJ_G0024903.1 mouse_genomes_project 2 32769610 32996193 + MGP_WSBEiJ_P0053279 Mapkap1 protein_coding protein_coding MGP_WSBEiJ_T0053280.1 MGP_WSBEiJ_G0024903.1 mouse_genomes_project 2 32769612 32994840 + MGP_WSBEiJ_P0053280 Mapkap1 protein_coding protein_coding MGP_WSBEiJ_T0053281.1 MGP_WSBEiJ_G0024903.1 mouse_genomes_project 2 32802835 32901344 + Mapkap1 protein_coding processed_transcript MGP_WSBEiJ_T0053282.1 MGP_WSBEiJ_G0024903.1 mouse_genomes_project 2 32808665 32864625 + MGP_WSBEiJ_P0053282 Mapkap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053283.1 MGP_WSBEiJ_G0024903.1 mouse_genomes_project 2 32990875 32995195 + Mapkap1 protein_coding processed_transcript MGP_WSBEiJ_T0055727.1 MGP_WSBEiJ_G0025560.1 mouse_genomes_project 2 119157083 119167543 + Fam98b protein_coding retained_intron MGP_WSBEiJ_T0055728.1 MGP_WSBEiJ_G0025560.1 mouse_genomes_project 2 119157083 119180196 + MGP_WSBEiJ_P0055728 Fam98b protein_coding protein_coding MGP_WSBEiJ_T0055729.1 MGP_WSBEiJ_G0025560.1 mouse_genomes_project 2 119166081 119167541 + Fam98b protein_coding processed_transcript MGP_WSBEiJ_T0013165.1 MGP_WSBEiJ_G0011295.1 mouse_genomes_project 2 38748672 38749189 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057244.1 MGP_WSBEiJ_G0025906.1 mouse_genomes_project 2 155853252 155862559 - MGP_WSBEiJ_P0057244 Nrsn2 protein_coding protein_coding MGP_WSBEiJ_T0058033.1 MGP_WSBEiJ_G0026084.1 mouse_genomes_project 2 168176711 168194557 + MGP_WSBEiJ_P0058033 Stk4 protein_coding protein_coding MGP_WSBEiJ_T0058034.1 MGP_WSBEiJ_G0026084.1 mouse_genomes_project 2 168181391 168268214 + MGP_WSBEiJ_P0058034 Stk4 protein_coding protein_coding MGP_WSBEiJ_T0058035.1 MGP_WSBEiJ_G0026084.1 mouse_genomes_project 2 168189572 168205723 + Stk4 protein_coding processed_transcript MGP_WSBEiJ_T0058036.1 MGP_WSBEiJ_G0026084.1 mouse_genomes_project 2 168210376 168228901 + MGP_WSBEiJ_P0058036 Stk4 protein_coding protein_coding MGP_WSBEiJ_T0058037.1 MGP_WSBEiJ_G0026084.1 mouse_genomes_project 2 168220791 168268214 + MGP_WSBEiJ_P0058037 Stk4 protein_coding protein_coding MGP_WSBEiJ_T0056859.1 MGP_WSBEiJ_G0025807.1 mouse_genomes_project 2 137421078 137469444 - MGP_WSBEiJ_P0056859 Tmx4 protein_coding protein_coding MGP_WSBEiJ_T0056860.1 MGP_WSBEiJ_G0025807.1 mouse_genomes_project 2 137425898 137469431 - Tmx4 protein_coding processed_transcript MGP_WSBEiJ_T0056861.1 MGP_WSBEiJ_G0025807.1 mouse_genomes_project 2 137464803 137469389 - MGP_WSBEiJ_P0056861 Tmx4 protein_coding protein_coding MGP_WSBEiJ_T0056173.1 MGP_WSBEiJ_G0025642.1 mouse_genomes_project 2 123514559 123540985 + MGP_WSBEiJ_P0056173 Pdia3 protein_coding protein_coding MGP_WSBEiJ_T0056174.1 MGP_WSBEiJ_G0025642.1 mouse_genomes_project 2 123514667 123526570 + Pdia3 protein_coding processed_transcript MGP_WSBEiJ_T0056175.1 MGP_WSBEiJ_G0025642.1 mouse_genomes_project 2 123514892 123536289 + MGP_WSBEiJ_P0056175 Pdia3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056176.1 MGP_WSBEiJ_G0025642.1 mouse_genomes_project 2 123526598 123534736 + Pdia3 protein_coding retained_intron MGP_WSBEiJ_T0007016.1 MGP_WSBEiJ_G0005760.1 mouse_genomes_project 2 860293 875181 + Gm13180 lincRNA lincRNA MGP_WSBEiJ_T0010266.1 MGP_WSBEiJ_G0008423.1 mouse_genomes_project 2 93007573 93007671 + Mir1955 miRNA miRNA MGP_WSBEiJ_T0013138.1 MGP_WSBEiJ_G0011268.1 mouse_genomes_project 2 32775750 32776110 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056548.1 MGP_WSBEiJ_G0025738.1 mouse_genomes_project 2 131700790 131705193 + MGP_WSBEiJ_P0056548 Chchd5 protein_coding protein_coding MGP_WSBEiJ_T0056549.1 MGP_WSBEiJ_G0025738.1 mouse_genomes_project 2 131700894 131705072 + Chchd5 protein_coding processed_transcript MGP_WSBEiJ_T0056550.1 MGP_WSBEiJ_G0025738.1 mouse_genomes_project 2 131700940 131704539 + Chchd5 protein_coding retained_intron MGP_WSBEiJ_T0056415.1 MGP_WSBEiJ_G0025702.1 mouse_genomes_project 2 129535738 129553423 + Blvra protein_coding retained_intron MGP_WSBEiJ_T0056416.1 MGP_WSBEiJ_G0025702.1 mouse_genomes_project 2 129535740 129563470 + MGP_WSBEiJ_P0056416 Blvra protein_coding protein_coding MGP_WSBEiJ_T0056417.1 MGP_WSBEiJ_G0025702.1 mouse_genomes_project 2 129535752 129555867 + MGP_WSBEiJ_P0056417 Blvra protein_coding protein_coding MGP_WSBEiJ_T0056418.1 MGP_WSBEiJ_G0025702.1 mouse_genomes_project 2 129535766 129552972 + MGP_WSBEiJ_P0056418 Blvra protein_coding protein_coding MGP_WSBEiJ_T0056419.1 MGP_WSBEiJ_G0025702.1 mouse_genomes_project 2 129544517 129557682 + MGP_WSBEiJ_P0056419 Blvra protein_coding protein_coding MGP_WSBEiJ_T0100699.1 MGP_WSBEiJ_G0039157.1 mouse_genomes_project 2 85849763 85850659 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013102.1 MGP_WSBEiJ_G0011232.1 mouse_genomes_project 2 16221944 16222261 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099391.1 MGP_WSBEiJ_G0038054.1 mouse_genomes_project 2 151454575 151454888 + Gm24221 snoRNA snoRNA MGP_WSBEiJ_T0054531.1 MGP_WSBEiJ_G0025150.1 mouse_genomes_project 2 80939126 80982976 + Gm4353 protein_coding retained_intron MGP_WSBEiJ_T0054533.1 MGP_WSBEiJ_G0025150.1 mouse_genomes_project 2 80961335 80982972 + MGP_WSBEiJ_P0054533 Gm4353 protein_coding protein_coding MGP_WSBEiJ_T0054535.1 MGP_WSBEiJ_G0025150.1 mouse_genomes_project 2 80961351 80979088 + MGP_WSBEiJ_P0054535 Gm4353 protein_coding protein_coding MGP_WSBEiJ_T0054536.1 MGP_WSBEiJ_G0025150.1 mouse_genomes_project 2 80961783 80968988 + Gm4353 protein_coding processed_transcript MGP_WSBEiJ_T0054537.1 MGP_WSBEiJ_G0025150.1 mouse_genomes_project 2 80966721 80976496 + Gm4353 protein_coding processed_transcript MGP_WSBEiJ_T0053563.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37519621 37570304 - MGP_WSBEiJ_P0053563 Golga1 protein_coding protein_coding MGP_WSBEiJ_T0053564.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37519727 37570251 - MGP_WSBEiJ_P0053564 Golga1 protein_coding protein_coding MGP_WSBEiJ_T0053565.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37519969 37557771 - MGP_WSBEiJ_P0053565 Golga1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053566.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37520245 37521873 - Golga1 protein_coding processed_transcript MGP_WSBEiJ_T0053567.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37521119 37522033 - Golga1 protein_coding retained_intron MGP_WSBEiJ_T0053568.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37521119 37570251 - MGP_WSBEiJ_P0053568 Golga1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053569.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37521279 37523028 - MGP_WSBEiJ_P0053569 Golga1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053570.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37521620 37522708 - Golga1 protein_coding retained_intron MGP_WSBEiJ_T0053571.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37526178 37570251 - Golga1 protein_coding retained_intron MGP_WSBEiJ_T0053572.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37544165 37560879 - MGP_WSBEiJ_P0053572 Golga1 protein_coding protein_coding MGP_WSBEiJ_T0053573.1 MGP_WSBEiJ_G0024974.1 mouse_genomes_project 2 37551158 37570248 - Golga1 protein_coding retained_intron MGP_WSBEiJ_T0058360.1 MGP_WSBEiJ_G0026163.1 mouse_genomes_project 2 171892650 171916215 + MGP_WSBEiJ_P0058360 Rnf114 protein_coding protein_coding MGP_WSBEiJ_T0058361.1 MGP_WSBEiJ_G0026163.1 mouse_genomes_project 2 171903133 171916222 + MGP_WSBEiJ_P0058361 Rnf114 protein_coding protein_coding MGP_WSBEiJ_T0058362.1 MGP_WSBEiJ_G0026163.1 mouse_genomes_project 2 171903490 171916213 + MGP_WSBEiJ_P0058362 Rnf114 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098138.1 MGP_WSBEiJ_G0036801.1 mouse_genomes_project 2 168760383 168760490 + Gm25512 snRNA snRNA MGP_WSBEiJ_T0056695.1 MGP_WSBEiJ_G0025772.1 mouse_genomes_project 2 133696261 133699718 - MGP_WSBEiJ_P0056695 Gfra4 protein_coding protein_coding MGP_WSBEiJ_T0056696.1 MGP_WSBEiJ_G0025772.1 mouse_genomes_project 2 133696268 133698087 - Gfra4 protein_coding retained_intron MGP_WSBEiJ_T0056697.1 MGP_WSBEiJ_G0025772.1 mouse_genomes_project 2 133696269 133698141 - Gfra4 protein_coding retained_intron MGP_WSBEiJ_T0056698.1 MGP_WSBEiJ_G0025772.1 mouse_genomes_project 2 133696805 133699312 - MGP_WSBEiJ_P0056698 Gfra4 protein_coding protein_coding MGP_WSBEiJ_T0056699.1 MGP_WSBEiJ_G0025772.1 mouse_genomes_project 2 133696837 133699718 - MGP_WSBEiJ_P0056699 Gfra4 protein_coding protein_coding MGP_WSBEiJ_T0056700.1 MGP_WSBEiJ_G0025772.1 mouse_genomes_project 2 133696837 133699312 - MGP_WSBEiJ_P0056700 Gfra4 protein_coding protein_coding MGP_WSBEiJ_T0056701.1 MGP_WSBEiJ_G0025772.1 mouse_genomes_project 2 133697861 133699718 - MGP_WSBEiJ_P0056701 Gfra4 protein_coding protein_coding MGP_WSBEiJ_T0056702.1 MGP_WSBEiJ_G0025772.1 mouse_genomes_project 2 133697861 133699312 - MGP_WSBEiJ_P0056702 Gfra4 protein_coding protein_coding MGP_WSBEiJ_T0100734.1 MGP_WSBEiJ_G0039192.1 mouse_genomes_project 2 91101801 91113568 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010290.1 MGP_WSBEiJ_G0008447.1 mouse_genomes_project 2 133157370 133157425 - Gm23876 miRNA miRNA MGP_WSBEiJ_T0013264.1 MGP_WSBEiJ_G0011394.1 mouse_genomes_project 2 80408762 80409585 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054843.1 MGP_WSBEiJ_G0025329.1 mouse_genomes_project 2 89817380 89818316 - MGP_WSBEiJ_P0054843 protein_coding protein_coding MGP_WSBEiJ_T0099358.1 MGP_WSBEiJ_G0038021.1 mouse_genomes_project 2 60754785 60754914 + Gm22338 snoRNA snoRNA MGP_WSBEiJ_T0058379.1 MGP_WSBEiJ_G0026169.1 mouse_genomes_project 2 172416828 172449062 - Fam65c protein_coding processed_transcript MGP_WSBEiJ_T0058380.1 MGP_WSBEiJ_G0026169.1 mouse_genomes_project 2 172416830 172449062 - MGP_WSBEiJ_P0058380 Fam65c protein_coding protein_coding MGP_WSBEiJ_T0058381.1 MGP_WSBEiJ_G0026169.1 mouse_genomes_project 2 172423048 172424746 - Fam65c protein_coding retained_intron MGP_WSBEiJ_T0058382.1 MGP_WSBEiJ_G0026169.1 mouse_genomes_project 2 172426761 172429307 - Fam65c protein_coding retained_intron MGP_WSBEiJ_T0013254.1 MGP_WSBEiJ_G0011384.1 mouse_genomes_project 2 77256414 77256828 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058278.1 MGP_WSBEiJ_G0026149.1 mouse_genomes_project 2 170887486 171039517 - MGP_WSBEiJ_P0058278 Prex1 protein_coding protein_coding MGP_WSBEiJ_T0058279.1 MGP_WSBEiJ_G0026149.1 mouse_genomes_project 2 170888104 170959773 - MGP_WSBEiJ_P0058279 Prex1 protein_coding protein_coding MGP_WSBEiJ_T0058280.1 MGP_WSBEiJ_G0026149.1 mouse_genomes_project 2 170888110 170903236 - MGP_WSBEiJ_P0058280 Prex1 protein_coding protein_coding MGP_WSBEiJ_T0058281.1 MGP_WSBEiJ_G0026149.1 mouse_genomes_project 2 170889461 170894124 - Prex1 protein_coding processed_transcript MGP_WSBEiJ_T0058282.1 MGP_WSBEiJ_G0026149.1 mouse_genomes_project 2 170920877 170924209 - Prex1 protein_coding retained_intron MGP_WSBEiJ_T0058283.1 MGP_WSBEiJ_G0026149.1 mouse_genomes_project 2 170954262 171029277 - Prex1 protein_coding processed_transcript MGP_WSBEiJ_T0058284.1 MGP_WSBEiJ_G0026149.1 mouse_genomes_project 2 170965179 171039476 - Prex1 protein_coding retained_intron MGP_WSBEiJ_T0058285.1 MGP_WSBEiJ_G0026149.1 mouse_genomes_project 2 170965392 171039287 - Prex1 protein_coding retained_intron MGP_WSBEiJ_T0017319.1 MGP_WSBEiJ_G0014909.1 mouse_genomes_project 2 165512953 165513276 - Gm29229 processed_transcript processed_transcript MGP_WSBEiJ_T0057027.1 MGP_WSBEiJ_G0025846.1 mouse_genomes_project 2 148349114 148830931 + MGP_WSBEiJ_P0057027 Slc24a3 protein_coding protein_coding MGP_WSBEiJ_T0057028.1 MGP_WSBEiJ_G0025846.1 mouse_genomes_project 2 148349279 148706080 + Slc24a3 protein_coding processed_transcript MGP_WSBEiJ_T0057029.1 MGP_WSBEiJ_G0025846.1 mouse_genomes_project 2 148421223 148830931 + Slc24a3 protein_coding processed_transcript MGP_WSBEiJ_T0057030.1 MGP_WSBEiJ_G0025846.1 mouse_genomes_project 2 148423584 148829125 + MGP_WSBEiJ_P0057030 Slc24a3 protein_coding protein_coding MGP_WSBEiJ_T0057031.1 MGP_WSBEiJ_G0025846.1 mouse_genomes_project 2 148797915 148805256 + Slc24a3 protein_coding processed_transcript MGP_WSBEiJ_T0051662.1 MGP_WSBEiJ_G0024632.1 mouse_genomes_project 2 12539323 12572357 + MGP_WSBEiJ_P0051662 Arl5b protein_coding protein_coding MGP_WSBEiJ_T0051664.1 MGP_WSBEiJ_G0024632.1 mouse_genomes_project 2 12545168 12572361 + MGP_WSBEiJ_P0051664 Arl5b protein_coding protein_coding MGP_WSBEiJ_T0051665.1 MGP_WSBEiJ_G0024632.1 mouse_genomes_project 2 12545215 12566512 + MGP_WSBEiJ_P0051665 Arl5b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051666.1 MGP_WSBEiJ_G0024632.1 mouse_genomes_project 2 12545275 12567476 + MGP_WSBEiJ_P0051666 Arl5b protein_coding protein_coding MGP_WSBEiJ_T0051667.1 MGP_WSBEiJ_G0024632.1 mouse_genomes_project 2 12558055 12566522 + MGP_WSBEiJ_P0051667 Arl5b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051668.1 MGP_WSBEiJ_G0024632.1 mouse_genomes_project 2 12559879 12563088 + Arl5b protein_coding retained_intron MGP_WSBEiJ_T0051669.1 MGP_WSBEiJ_G0024632.1 mouse_genomes_project 2 12564915 12572357 + MGP_WSBEiJ_P0051669 Arl5b protein_coding protein_coding MGP_WSBEiJ_T0057885.1 MGP_WSBEiJ_G0026048.1 mouse_genomes_project 2 162542628 162647066 + Ppp1r16b protein_coding retained_intron MGP_WSBEiJ_T0057886.1 MGP_WSBEiJ_G0026048.1 mouse_genomes_project 2 162542628 162658054 + MGP_WSBEiJ_P0057886 Ppp1r16b protein_coding protein_coding MGP_WSBEiJ_T0057887.1 MGP_WSBEiJ_G0026048.1 mouse_genomes_project 2 162543963 162658054 + MGP_WSBEiJ_P0057887 Ppp1r16b protein_coding protein_coding MGP_WSBEiJ_T0057888.1 MGP_WSBEiJ_G0026048.1 mouse_genomes_project 2 162547355 162658054 + MGP_WSBEiJ_P0057888 Ppp1r16b protein_coding protein_coding MGP_WSBEiJ_T0057889.1 MGP_WSBEiJ_G0026048.1 mouse_genomes_project 2 162577080 162658054 + MGP_WSBEiJ_P0057889 Ppp1r16b protein_coding protein_coding MGP_WSBEiJ_T0007190.1 MGP_WSBEiJ_G0005900.1 mouse_genomes_project 2 117166728 117169312 + Gm13976 lincRNA lincRNA MGP_WSBEiJ_T0052224.1 MGP_WSBEiJ_G0024737.1 mouse_genomes_project 2 23576708 23596107 - MGP_WSBEiJ_P0052224 Glt6d1 protein_coding protein_coding MGP_WSBEiJ_T0052225.1 MGP_WSBEiJ_G0024737.1 mouse_genomes_project 2 23578063 23596090 - Glt6d1 protein_coding processed_transcript MGP_WSBEiJ_T0057890.1 MGP_WSBEiJ_G0026049.1 mouse_genomes_project 2 162660010 162678559 + MGP_WSBEiJ_P0057890 Fam83d protein_coding protein_coding MGP_WSBEiJ_T0057891.1 MGP_WSBEiJ_G0026049.1 mouse_genomes_project 2 162673328 162678559 + Fam83d protein_coding retained_intron MGP_WSBEiJ_T0004058.1 MGP_WSBEiJ_G0003593.1 mouse_genomes_project 2 160107159 160108229 - Gm14170 antisense antisense MGP_WSBEiJ_T0007213.1 MGP_WSBEiJ_G0005916.1 mouse_genomes_project 2 127692182 127693473 - Gm14003 lincRNA lincRNA MGP_WSBEiJ_T0053201.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31222931 31261622 - MGP_WSBEiJ_P0053201 Lrsam1 protein_coding protein_coding MGP_WSBEiJ_T0053202.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31222935 31261983 - MGP_WSBEiJ_P0053202 Lrsam1 protein_coding protein_coding MGP_WSBEiJ_T0053203.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31227301 31239841 - MGP_WSBEiJ_P0053203 Lrsam1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053204.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31233537 31236820 - Lrsam1 protein_coding retained_intron MGP_WSBEiJ_T0053205.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31254344 31261968 - MGP_WSBEiJ_P0053205 Lrsam1 protein_coding protein_coding MGP_WSBEiJ_T0053206.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31254346 31261959 - MGP_WSBEiJ_P0053206 Lrsam1 protein_coding protein_coding MGP_WSBEiJ_T0053207.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31254359 31260268 - MGP_WSBEiJ_P0053207 Lrsam1 protein_coding protein_coding MGP_WSBEiJ_T0053208.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31254363 31261618 - MGP_WSBEiJ_P0053208 Lrsam1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053209.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31257545 31261960 - MGP_WSBEiJ_P0053209 Lrsam1 protein_coding protein_coding MGP_WSBEiJ_T0053210.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31257552 31261960 - MGP_WSBEiJ_P0053210 Lrsam1 protein_coding protein_coding MGP_WSBEiJ_T0053211.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31260608 31261969 - Lrsam1 protein_coding processed_transcript MGP_WSBEiJ_T0053212.1 MGP_WSBEiJ_G0024892.1 mouse_genomes_project 2 31261440 31261975 - Lrsam1 protein_coding processed_transcript MGP_WSBEiJ_T0013107.1 MGP_WSBEiJ_G0011237.1 mouse_genomes_project 2 17604869 17606309 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003850.1 MGP_WSBEiJ_G0003441.1 mouse_genomes_project 2 24225526 24231259 + Gm13563 antisense antisense MGP_WSBEiJ_T0003851.1 MGP_WSBEiJ_G0003441.1 mouse_genomes_project 2 24229552 24231795 + Gm13563 antisense antisense MGP_WSBEiJ_T0003852.1 MGP_WSBEiJ_G0003441.1 mouse_genomes_project 2 24231457 24233019 + Gm13563 antisense antisense MGP_WSBEiJ_T0057459.1 MGP_WSBEiJ_G0025976.1 mouse_genomes_project 2 158554649 158574818 - MGP_WSBEiJ_P0057459 Eif2s2 protein_coding protein_coding MGP_WSBEiJ_T0057460.1 MGP_WSBEiJ_G0025976.1 mouse_genomes_project 2 158566504 158574945 - Eif2s2 protein_coding retained_intron MGP_WSBEiJ_T0057461.1 MGP_WSBEiJ_G0025976.1 mouse_genomes_project 2 158566539 158574922 - Eif2s2 protein_coding retained_intron MGP_WSBEiJ_T0056901.1 MGP_WSBEiJ_G0025813.1 mouse_genomes_project 2 139593622 139663249 + MGP_WSBEiJ_P0056901 Snap25 protein_coding protein_coding MGP_WSBEiJ_T0056902.1 MGP_WSBEiJ_G0025813.1 mouse_genomes_project 2 139593623 139643661 + Snap25 protein_coding retained_intron MGP_WSBEiJ_T0056903.1 MGP_WSBEiJ_G0025813.1 mouse_genomes_project 2 139593647 139662170 + MGP_WSBEiJ_P0056903 Snap25 protein_coding protein_coding MGP_WSBEiJ_T0003812.1 MGP_WSBEiJ_G0003411.1 mouse_genomes_project 2 1604262 1605550 - Gm13179 antisense antisense MGP_WSBEiJ_T0003813.1 MGP_WSBEiJ_G0003411.1 mouse_genomes_project 2 1604566 1605550 - Gm13179 antisense antisense MGP_WSBEiJ_T0097036.1 MGP_WSBEiJ_G0035717.1 mouse_genomes_project 2 170483039 170483144 + Gm22687 rRNA rRNA MGP_WSBEiJ_T0013417.1 MGP_WSBEiJ_G0011547.1 mouse_genomes_project 2 145685552 145687699 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058131.1 MGP_WSBEiJ_G0026124.1 mouse_genomes_project 2 168985954 169002933 + MGP_WSBEiJ_P0058131 Zswim3 protein_coding protein_coding MGP_WSBEiJ_T0098131.1 MGP_WSBEiJ_G0036794.1 mouse_genomes_project 2 143473817 143473924 - Gm23846 snRNA snRNA MGP_WSBEiJ_T0056023.1 MGP_WSBEiJ_G0025621.1 mouse_genomes_project 2 122686300 122691593 - MGP_WSBEiJ_P0056023 Lrrc57 protein_coding protein_coding MGP_WSBEiJ_T0056024.1 MGP_WSBEiJ_G0025621.1 mouse_genomes_project 2 122686300 122691428 - MGP_WSBEiJ_P0056024 Lrrc57 protein_coding protein_coding MGP_WSBEiJ_T0056025.1 MGP_WSBEiJ_G0025621.1 mouse_genomes_project 2 122686300 122691583 - MGP_WSBEiJ_P0056025 Lrrc57 protein_coding protein_coding MGP_WSBEiJ_T0056026.1 MGP_WSBEiJ_G0025621.1 mouse_genomes_project 2 122686300 122691388 - MGP_WSBEiJ_P0056026 Lrrc57 protein_coding protein_coding MGP_WSBEiJ_T0056027.1 MGP_WSBEiJ_G0025621.1 mouse_genomes_project 2 122686882 122690045 - MGP_WSBEiJ_P0056027 Lrrc57 protein_coding protein_coding MGP_WSBEiJ_T0056028.1 MGP_WSBEiJ_G0025621.1 mouse_genomes_project 2 122688056 122691581 - MGP_WSBEiJ_P0056028 Lrrc57 protein_coding protein_coding MGP_WSBEiJ_T0056029.1 MGP_WSBEiJ_G0025621.1 mouse_genomes_project 2 122690890 122691375 - Lrrc57 protein_coding retained_intron MGP_WSBEiJ_T0055771.1 MGP_WSBEiJ_G0025571.1 mouse_genomes_project 2 120686186 120708061 - MGP_WSBEiJ_P0055771 Plcb2 protein_coding protein_coding MGP_WSBEiJ_T0055772.1 MGP_WSBEiJ_G0025571.1 mouse_genomes_project 2 120686665 120707982 - MGP_WSBEiJ_P0055772 Plcb2 protein_coding protein_coding MGP_WSBEiJ_T0055773.1 MGP_WSBEiJ_G0025571.1 mouse_genomes_project 2 120686849 120690040 - Plcb2 protein_coding retained_intron MGP_WSBEiJ_T0055774.1 MGP_WSBEiJ_G0025571.1 mouse_genomes_project 2 120687368 120688411 - Plcb2 protein_coding retained_intron MGP_WSBEiJ_T0055775.1 MGP_WSBEiJ_G0025571.1 mouse_genomes_project 2 120689486 120692779 - Plcb2 protein_coding retained_intron MGP_WSBEiJ_T0055776.1 MGP_WSBEiJ_G0025571.1 mouse_genomes_project 2 120692907 120708014 - Plcb2 protein_coding retained_intron MGP_WSBEiJ_T0053959.1 MGP_WSBEiJ_G0025036.1 mouse_genomes_project 2 61903341 61955332 - MGP_WSBEiJ_P0053959 Ifih1 protein_coding protein_coding MGP_WSBEiJ_T0053960.1 MGP_WSBEiJ_G0025036.1 mouse_genomes_project 2 61904990 61955274 - MGP_WSBEiJ_P0053960 Ifih1 protein_coding protein_coding MGP_WSBEiJ_T0053961.1 MGP_WSBEiJ_G0025036.1 mouse_genomes_project 2 61915708 61955376 - Ifih1 protein_coding retained_intron MGP_WSBEiJ_T0053962.1 MGP_WSBEiJ_G0025036.1 mouse_genomes_project 2 61937737 61948588 - Ifih1 protein_coding processed_transcript MGP_WSBEiJ_T0053963.1 MGP_WSBEiJ_G0025036.1 mouse_genomes_project 2 61941772 61955279 - Ifih1 protein_coding retained_intron MGP_WSBEiJ_T0053777.1 MGP_WSBEiJ_G0025008.1 mouse_genomes_project 2 56349658 56484863 + Gpd2 protein_coding processed_transcript MGP_WSBEiJ_T0053778.1 MGP_WSBEiJ_G0025008.1 mouse_genomes_project 2 56349701 56487729 + MGP_WSBEiJ_P0053778 Gpd2 protein_coding protein_coding MGP_WSBEiJ_T0053779.1 MGP_WSBEiJ_G0025008.1 mouse_genomes_project 2 56350320 56487729 + MGP_WSBEiJ_P0053779 Gpd2 protein_coding protein_coding MGP_WSBEiJ_T0053780.1 MGP_WSBEiJ_G0025008.1 mouse_genomes_project 2 56350405 56487729 + MGP_WSBEiJ_P0053780 Gpd2 protein_coding protein_coding MGP_WSBEiJ_T0053781.1 MGP_WSBEiJ_G0025008.1 mouse_genomes_project 2 56356154 56420141 + Gpd2 protein_coding processed_transcript MGP_WSBEiJ_T0053782.1 MGP_WSBEiJ_G0025008.1 mouse_genomes_project 2 56377586 56380560 + Gpd2 protein_coding processed_transcript MGP_WSBEiJ_T0053783.1 MGP_WSBEiJ_G0025008.1 mouse_genomes_project 2 56379828 56380560 + Gpd2 protein_coding processed_transcript MGP_WSBEiJ_T0058100.1 MGP_WSBEiJ_G0026112.1 mouse_genomes_project 2 168820037 168826999 - MGP_WSBEiJ_P0058100 Wfdc9 protein_coding protein_coding MGP_WSBEiJ_T0058101.1 MGP_WSBEiJ_G0026112.1 mouse_genomes_project 2 168820193 168822170 - MGP_WSBEiJ_P0058101 Wfdc9 protein_coding protein_coding MGP_WSBEiJ_T0010185.1 MGP_WSBEiJ_G0008342.1 mouse_genomes_project 2 7818680 7818753 + Mir466 miRNA miRNA MGP_WSBEiJ_T0056732.1 MGP_WSBEiJ_G0025780.1 mouse_genomes_project 2 133846115 133857692 + MGP_WSBEiJ_P0056732 Cdc25b protein_coding protein_coding MGP_WSBEiJ_T0056733.1 MGP_WSBEiJ_G0025780.1 mouse_genomes_project 2 133846124 133857694 + MGP_WSBEiJ_P0056733 Cdc25b protein_coding protein_coding MGP_WSBEiJ_T0056734.1 MGP_WSBEiJ_G0025780.1 mouse_genomes_project 2 133847325 133851086 + Cdc25b protein_coding retained_intron MGP_WSBEiJ_T0056735.1 MGP_WSBEiJ_G0025780.1 mouse_genomes_project 2 133850517 133851270 + Cdc25b protein_coding retained_intron MGP_WSBEiJ_T0056736.1 MGP_WSBEiJ_G0025780.1 mouse_genomes_project 2 133850910 133852566 + Cdc25b protein_coding retained_intron MGP_WSBEiJ_T0056737.1 MGP_WSBEiJ_G0025780.1 mouse_genomes_project 2 133850980 133852453 + Cdc25b protein_coding retained_intron MGP_WSBEiJ_T0056738.1 MGP_WSBEiJ_G0025780.1 mouse_genomes_project 2 133852044 133853580 + Cdc25b protein_coding retained_intron MGP_WSBEiJ_T0013363.1 MGP_WSBEiJ_G0011493.1 mouse_genomes_project 2 113827405 113830425 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013428.1 MGP_WSBEiJ_G0011558.1 mouse_genomes_project 2 148124394 148125215 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017235.1 MGP_WSBEiJ_G0014872.1 mouse_genomes_project 2 108101675 108102151 - BB218582 processed_transcript processed_transcript MGP_WSBEiJ_T0017236.1 MGP_WSBEiJ_G0014872.1 mouse_genomes_project 2 108101678 108109027 - BB218582 processed_transcript processed_transcript MGP_WSBEiJ_T0017237.1 MGP_WSBEiJ_G0014872.1 mouse_genomes_project 2 108105934 108108997 - BB218582 processed_transcript processed_transcript MGP_WSBEiJ_T0054771.1 MGP_WSBEiJ_G0025269.1 mouse_genomes_project 2 88044680 88045661 + MGP_WSBEiJ_P0054771 Olfr1122 protein_coding protein_coding MGP_WSBEiJ_T0053752.1 MGP_WSBEiJ_G0025001.1 mouse_genomes_project 2 51850534 52149401 + MGP_WSBEiJ_P0053752 Fmnl2 protein_coding protein_coding MGP_WSBEiJ_T0053753.1 MGP_WSBEiJ_G0025001.1 mouse_genomes_project 2 51850542 52149801 + MGP_WSBEiJ_P0053753 Fmnl2 protein_coding protein_coding MGP_WSBEiJ_T0053754.1 MGP_WSBEiJ_G0025001.1 mouse_genomes_project 2 51850542 52147475 + MGP_WSBEiJ_P0053754 Fmnl2 protein_coding protein_coding MGP_WSBEiJ_T0053755.1 MGP_WSBEiJ_G0025001.1 mouse_genomes_project 2 52127632 52149401 + MGP_WSBEiJ_P0053755 Fmnl2 protein_coding protein_coding MGP_WSBEiJ_T0053756.1 MGP_WSBEiJ_G0025001.1 mouse_genomes_project 2 52134566 52149401 + MGP_WSBEiJ_P0053756 Fmnl2 protein_coding protein_coding MGP_WSBEiJ_T0053757.1 MGP_WSBEiJ_G0025001.1 mouse_genomes_project 2 52141604 52147800 + MGP_WSBEiJ_P0053757 Fmnl2 protein_coding protein_coding MGP_WSBEiJ_T0054715.1 MGP_WSBEiJ_G0025215.1 mouse_genomes_project 2 86632935 86633877 - MGP_WSBEiJ_P0054715 protein_coding protein_coding MGP_WSBEiJ_T0013078.1 MGP_WSBEiJ_G0011208.1 mouse_genomes_project 2 8266285 8267123 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099406.1 MGP_WSBEiJ_G0038069.1 mouse_genomes_project 2 169493668 169493799 - Gm25569 snoRNA snoRNA MGP_WSBEiJ_T0056636.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133047169 133061999 + Vps16 protein_coding retained_intron MGP_WSBEiJ_T0056637.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133047195 133067815 + MGP_WSBEiJ_P0056637 Vps16 protein_coding protein_coding MGP_WSBEiJ_T0056638.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133047195 133063463 + MGP_WSBEiJ_P0056638 Vps16 protein_coding protein_coding MGP_WSBEiJ_T0056639.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133047234 133063842 + Vps16 protein_coding processed_transcript MGP_WSBEiJ_T0056640.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133061181 133062613 + Vps16 protein_coding retained_intron MGP_WSBEiJ_T0056641.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133063175 133065251 + Vps16 protein_coding retained_intron MGP_WSBEiJ_T0056642.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133063867 133064853 + Vps16 protein_coding retained_intron MGP_WSBEiJ_T0056643.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133065153 133066945 + Vps16 protein_coding retained_intron MGP_WSBEiJ_T0056644.1 MGP_WSBEiJ_G0025759.1 mouse_genomes_project 2 133066712 133067280 + Vps16 protein_coding retained_intron MGP_WSBEiJ_T0054696.1 MGP_WSBEiJ_G0025197.1 mouse_genomes_project 2 86234691 86235627 - MGP_WSBEiJ_P0054696 Olfr1012 protein_coding protein_coding MGP_WSBEiJ_T0007026.1 MGP_WSBEiJ_G0005768.1 mouse_genomes_project 2 4701125 4702509 + Gm28641 lincRNA lincRNA MGP_WSBEiJ_T0100741.1 MGP_WSBEiJ_G0039199.1 mouse_genomes_project 2 141824992 141825577 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0017251.1 MGP_WSBEiJ_G0014879.1 mouse_genomes_project 2 119784607 120060454 - Gm13986 processed_transcript processed_transcript MGP_WSBEiJ_T0017252.1 MGP_WSBEiJ_G0014879.1 mouse_genomes_project 2 120019241 120060343 - Gm13986 processed_transcript processed_transcript MGP_WSBEiJ_T0054744.1 MGP_WSBEiJ_G0025243.1 mouse_genomes_project 2 87316624 87317560 - MGP_WSBEiJ_P0054744 Olfr1089 protein_coding protein_coding MGP_WSBEiJ_T0013381.1 MGP_WSBEiJ_G0011511.1 mouse_genomes_project 2 124699646 124700239 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057652.1 MGP_WSBEiJ_G0026007.1 mouse_genomes_project 2 159843368 159865342 - MGP_WSBEiJ_P0057652 Nfs1 protein_coding protein_coding MGP_WSBEiJ_T0057653.1 MGP_WSBEiJ_G0026007.1 mouse_genomes_project 2 159843379 159861140 - MGP_WSBEiJ_P0057653 Nfs1 protein_coding protein_coding MGP_WSBEiJ_T0057654.1 MGP_WSBEiJ_G0026007.1 mouse_genomes_project 2 159859833 159865309 - Nfs1 protein_coding retained_intron MGP_WSBEiJ_T0057655.1 MGP_WSBEiJ_G0026007.1 mouse_genomes_project 2 159862982 159865336 - MGP_WSBEiJ_P0057655 Nfs1 protein_coding protein_coding MGP_WSBEiJ_T0055955.1 MGP_WSBEiJ_G0025613.1 mouse_genomes_project 2 122335498 122358258 - MGP_WSBEiJ_P0055955 Pla2g4d protein_coding protein_coding MGP_WSBEiJ_T0013120.1 MGP_WSBEiJ_G0011250.1 mouse_genomes_project 2 22180495 22182605 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052101.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23157342 23166224 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0052102.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23158468 23168085 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0052103.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23161122 23169840 + MGP_WSBEiJ_P0052103 Npdc1 protein_coding protein_coding MGP_WSBEiJ_T0052104.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23161158 23166755 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0052105.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23161220 23167754 + MGP_WSBEiJ_P0052105 Npdc1 protein_coding protein_coding MGP_WSBEiJ_T0052106.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23161222 23169840 + MGP_WSBEiJ_P0052106 Npdc1 protein_coding protein_coding MGP_WSBEiJ_T0052107.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23161245 23168222 + MGP_WSBEiJ_P0052107 Npdc1 protein_coding protein_coding MGP_WSBEiJ_T0052108.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23161290 23167018 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0052109.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23161499 23167910 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0052110.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23162138 23169837 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0052111.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23166190 23169840 + MGP_WSBEiJ_P0052111 Npdc1 protein_coding protein_coding MGP_WSBEiJ_T0052112.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23167188 23169602 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0052113.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23167598 23169834 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0052114.1 MGP_WSBEiJ_G0024710.1 mouse_genomes_project 2 23169217 23169837 + Npdc1 protein_coding processed_transcript MGP_WSBEiJ_T0053800.1 MGP_WSBEiJ_G0025013.1 mouse_genomes_project 2 57529157 57659205 - Acvr1 protein_coding processed_transcript MGP_WSBEiJ_T0053801.1 MGP_WSBEiJ_G0025013.1 mouse_genomes_project 2 57589209 57659205 - MGP_WSBEiJ_P0053801 Acvr1 protein_coding protein_coding MGP_WSBEiJ_T0053802.1 MGP_WSBEiJ_G0025013.1 mouse_genomes_project 2 57589216 57710702 - MGP_WSBEiJ_P0053802 Acvr1 protein_coding protein_coding MGP_WSBEiJ_T0053803.1 MGP_WSBEiJ_G0025013.1 mouse_genomes_project 2 57589216 57710700 - MGP_WSBEiJ_P0053803 Acvr1 protein_coding protein_coding MGP_WSBEiJ_T0053804.1 MGP_WSBEiJ_G0025013.1 mouse_genomes_project 2 57589923 57711019 - MGP_WSBEiJ_P0053804 Acvr1 protein_coding protein_coding MGP_WSBEiJ_T0053806.1 MGP_WSBEiJ_G0025013.1 mouse_genomes_project 2 57621028 57682281 - MGP_WSBEiJ_P0053806 Acvr1 protein_coding protein_coding MGP_WSBEiJ_T0055393.1 MGP_WSBEiJ_G0025458.1 mouse_genomes_project 2 104864024 105018039 + MGP_WSBEiJ_P0055393 Abtb2 protein_coding protein_coding MGP_WSBEiJ_T0055394.1 MGP_WSBEiJ_G0025458.1 mouse_genomes_project 2 105014650 105016833 + Abtb2 protein_coding processed_transcript MGP_WSBEiJ_T0055395.1 MGP_WSBEiJ_G0025458.1 mouse_genomes_project 2 105014696 105018039 + Abtb2 protein_coding processed_transcript MGP_WSBEiJ_T0057428.1 MGP_WSBEiJ_G0025966.1 mouse_genomes_project 2 158195190 158199439 + 1700003F12Rik protein_coding retained_intron MGP_WSBEiJ_T0057430.1 MGP_WSBEiJ_G0025966.1 mouse_genomes_project 2 158198508 158199624 + MGP_WSBEiJ_P0057430 1700003F12Rik protein_coding protein_coding MGP_WSBEiJ_T0057431.1 MGP_WSBEiJ_G0025966.1 mouse_genomes_project 2 158198547 158199624 + MGP_WSBEiJ_P0057431 1700003F12Rik protein_coding protein_coding MGP_WSBEiJ_T0053213.1 MGP_WSBEiJ_G0024893.1 mouse_genomes_project 2 31261925 31264897 + MGP_WSBEiJ_P0053213 Rpl12 protein_coding protein_coding MGP_WSBEiJ_T0053214.1 MGP_WSBEiJ_G0024893.1 mouse_genomes_project 2 31262088 31265748 + Rpl12 protein_coding retained_intron MGP_WSBEiJ_T0053215.1 MGP_WSBEiJ_G0024893.1 mouse_genomes_project 2 31262097 31264446 + Rpl12 protein_coding retained_intron MGP_WSBEiJ_T0053216.1 MGP_WSBEiJ_G0024893.1 mouse_genomes_project 2 31262100 31263244 + Rpl12 protein_coding retained_intron MGP_WSBEiJ_T0053217.1 MGP_WSBEiJ_G0024893.1 mouse_genomes_project 2 31262108 31263617 + Rpl12 protein_coding retained_intron MGP_WSBEiJ_T0053218.1 MGP_WSBEiJ_G0024893.1 mouse_genomes_project 2 31262108 31264444 + MGP_WSBEiJ_P0053218 Rpl12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053219.1 MGP_WSBEiJ_G0024893.1 mouse_genomes_project 2 31262627 31263372 + Rpl12 protein_coding retained_intron MGP_WSBEiJ_T0013343.1 MGP_WSBEiJ_G0011473.1 mouse_genomes_project 2 106425827 106426249 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057397.1 MGP_WSBEiJ_G0025958.1 mouse_genomes_project 2 157797648 157828738 + MGP_WSBEiJ_P0057397 Bpifb1 protein_coding protein_coding MGP_WSBEiJ_T0057398.1 MGP_WSBEiJ_G0025958.1 mouse_genomes_project 2 157797653 157828711 + Bpifb1 protein_coding retained_intron MGP_WSBEiJ_T0057399.1 MGP_WSBEiJ_G0025958.1 mouse_genomes_project 2 157808798 157828712 + MGP_WSBEiJ_P0057399 Bpifb1 protein_coding protein_coding MGP_WSBEiJ_T0053410.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34204631 34407821 - MGP_WSBEiJ_P0053410 Ttll11 protein_coding protein_coding MGP_WSBEiJ_T0053411.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34208247 34442049 - MGP_WSBEiJ_P0053411 Ttll11 protein_coding protein_coding MGP_WSBEiJ_T0053412.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34208247 34442049 - MGP_WSBEiJ_P0053412 Ttll11 protein_coding protein_coding MGP_WSBEiJ_T0053413.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34208668 34442191 - MGP_WSBEiJ_P0053413 Ttll11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053414.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34242401 34338218 - Ttll11 protein_coding processed_transcript MGP_WSBEiJ_T0053415.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34345476 34404809 - Ttll11 protein_coding processed_transcript MGP_WSBEiJ_T0053416.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34358545 34442338 - Ttll11 protein_coding processed_transcript MGP_WSBEiJ_T0053417.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34358840 34410440 - MGP_WSBEiJ_P0053417 Ttll11 protein_coding protein_coding MGP_WSBEiJ_T0053418.1 MGP_WSBEiJ_G0024922.1 mouse_genomes_project 2 34358860 34412061 - MGP_WSBEiJ_P0053418 Ttll11 protein_coding protein_coding MGP_WSBEiJ_T0051353.1 MGP_WSBEiJ_G0024583.1 mouse_genomes_project 2 1960447 1980877 + MGP_WSBEiJ_P0051353 Phyh protein_coding protein_coding MGP_WSBEiJ_T0051354.1 MGP_WSBEiJ_G0024583.1 mouse_genomes_project 2 1960508 1970741 + Phyh protein_coding processed_transcript MGP_WSBEiJ_T0051355.1 MGP_WSBEiJ_G0024583.1 mouse_genomes_project 2 1979629 1980490 + Phyh protein_coding processed_transcript MGP_WSBEiJ_T0056808.1 MGP_WSBEiJ_G0025794.1 mouse_genomes_project 2 134943390 134947543 - MGP_WSBEiJ_P0056808 Pcna protein_coding protein_coding MGP_WSBEiJ_T0056809.1 MGP_WSBEiJ_G0025794.1 mouse_genomes_project 2 134944105 134946825 - Pcna protein_coding processed_transcript MGP_WSBEiJ_T0056810.1 MGP_WSBEiJ_G0025794.1 mouse_genomes_project 2 134945557 134947196 - Pcna protein_coding retained_intron MGP_WSBEiJ_T0056811.1 MGP_WSBEiJ_G0025794.1 mouse_genomes_project 2 134945657 134946831 - Pcna protein_coding retained_intron MGP_WSBEiJ_T0017177.1 MGP_WSBEiJ_G0014836.1 mouse_genomes_project 2 34668162 34670108 + Gm13429 processed_transcript processed_transcript MGP_WSBEiJ_T0017178.1 MGP_WSBEiJ_G0014836.1 mouse_genomes_project 2 34668670 34678772 + Gm13429 processed_transcript processed_transcript MGP_WSBEiJ_T0017179.1 MGP_WSBEiJ_G0014836.1 mouse_genomes_project 2 34676640 34678771 + Gm13429 processed_transcript processed_transcript MGP_WSBEiJ_T0056466.1 MGP_WSBEiJ_G0025715.1 mouse_genomes_project 2 129946081 130015904 - MGP_WSBEiJ_P0056466 Kcnip3 protein_coding protein_coding MGP_WSBEiJ_T0056467.1 MGP_WSBEiJ_G0025715.1 mouse_genomes_project 2 129946081 130015904 - MGP_WSBEiJ_P0056467 Kcnip3 protein_coding protein_coding MGP_WSBEiJ_T0056468.1 MGP_WSBEiJ_G0025715.1 mouse_genomes_project 2 129947712 129972705 - MGP_WSBEiJ_P0056468 Kcnip3 protein_coding protein_coding MGP_WSBEiJ_T0056469.1 MGP_WSBEiJ_G0025715.1 mouse_genomes_project 2 129947818 130016628 - Kcnip3 protein_coding processed_transcript MGP_WSBEiJ_T0055111.1 MGP_WSBEiJ_G0025407.1 mouse_genomes_project 2 92411432 92434322 + MGP_WSBEiJ_P0055111 Arhgap1 protein_coding protein_coding MGP_WSBEiJ_T0055112.1 MGP_WSBEiJ_G0025407.1 mouse_genomes_project 2 92413069 92416103 + Arhgap1 protein_coding processed_transcript MGP_WSBEiJ_T0055113.1 MGP_WSBEiJ_G0025407.1 mouse_genomes_project 2 92413069 92416105 + Arhgap1 protein_coding processed_transcript MGP_WSBEiJ_T0055114.1 MGP_WSBEiJ_G0025407.1 mouse_genomes_project 2 92413318 92430917 + Arhgap1 protein_coding processed_transcript MGP_WSBEiJ_T0055115.1 MGP_WSBEiJ_G0025407.1 mouse_genomes_project 2 92431104 92433950 + Arhgap1 protein_coding processed_transcript MGP_WSBEiJ_T0055116.1 MGP_WSBEiJ_G0025407.1 mouse_genomes_project 2 92432519 92433636 + Arhgap1 protein_coding processed_transcript MGP_WSBEiJ_T0003867.1 MGP_WSBEiJ_G0003452.1 mouse_genomes_project 2 28927788 28931390 + 4930527E20Rik antisense antisense MGP_WSBEiJ_T0053496.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 35919773 36087381 - MGP_WSBEiJ_P0053496 Strbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053502.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 36007401 36087447 - MGP_WSBEiJ_P0053502 Strbp protein_coding protein_coding MGP_WSBEiJ_T0053503.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 36007554 36032125 - Strbp protein_coding processed_transcript MGP_WSBEiJ_T0053504.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 36017607 36024578 - MGP_WSBEiJ_P0053504 Strbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053505.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 36021225 36149755 - MGP_WSBEiJ_P0053505 Strbp protein_coding protein_coding MGP_WSBEiJ_T0053506.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 36073843 36149828 - Strbp protein_coding processed_transcript MGP_WSBEiJ_T0053507.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 36074243 36100110 - MGP_WSBEiJ_P0053507 Strbp protein_coding protein_coding MGP_WSBEiJ_T0053508.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 36080710 36150339 - MGP_WSBEiJ_P0053508 Strbp protein_coding protein_coding MGP_WSBEiJ_T0053509.1 MGP_WSBEiJ_G0024961.1 mouse_genomes_project 2 36087281 36149629 - Strbp protein_coding processed_transcript MGP_WSBEiJ_T0007057.1 MGP_WSBEiJ_G0005791.1 mouse_genomes_project 2 24027435 24032400 - Gm13553 lincRNA lincRNA MGP_WSBEiJ_T0010291.1 MGP_WSBEiJ_G0008448.1 mouse_genomes_project 2 133696948 133697028 - Mir6973b miRNA miRNA MGP_WSBEiJ_T0013249.1 MGP_WSBEiJ_G0011379.1 mouse_genomes_project 2 74516749 74517208 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017270.1 MGP_WSBEiJ_G0014887.1 mouse_genomes_project 2 130718223 130961041 - Gm14005 processed_transcript processed_transcript MGP_WSBEiJ_T0017271.1 MGP_WSBEiJ_G0014887.1 mouse_genomes_project 2 130824816 130961223 - Gm14005 processed_transcript processed_transcript MGP_WSBEiJ_T0017272.1 MGP_WSBEiJ_G0014887.1 mouse_genomes_project 2 130843740 130961249 - Gm14005 processed_transcript processed_transcript MGP_WSBEiJ_T0017273.1 MGP_WSBEiJ_G0014887.1 mouse_genomes_project 2 130843916 130961071 - Gm14005 processed_transcript processed_transcript MGP_WSBEiJ_T0017274.1 MGP_WSBEiJ_G0014887.1 mouse_genomes_project 2 130872456 130961141 - Gm14005 processed_transcript processed_transcript MGP_WSBEiJ_T0017275.1 MGP_WSBEiJ_G0014887.1 mouse_genomes_project 2 130899584 130961087 - Gm14005 processed_transcript processed_transcript MGP_WSBEiJ_T0017276.1 MGP_WSBEiJ_G0014887.1 mouse_genomes_project 2 130899585 130960792 - Gm14005 processed_transcript processed_transcript MGP_WSBEiJ_T0013339.1 MGP_WSBEiJ_G0011469.1 mouse_genomes_project 2 105964287 105964474 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007164.1 MGP_WSBEiJ_G0005877.1 mouse_genomes_project 2 96279626 96283556 + Gm13794 lincRNA lincRNA MGP_WSBEiJ_T0100708.1 MGP_WSBEiJ_G0039166.1 mouse_genomes_project 2 86605771 86606728 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007073.1 MGP_WSBEiJ_G0005803.1 mouse_genomes_project 2 32360762 32452054 - C230014O12Rik lincRNA lincRNA MGP_WSBEiJ_T0007075.1 MGP_WSBEiJ_G0005803.1 mouse_genomes_project 2 32444365 32452060 - C230014O12Rik lincRNA lincRNA MGP_WSBEiJ_T0054915.1 MGP_WSBEiJ_G0025379.1 mouse_genomes_project 2 90984988 90986204 - MGP_WSBEiJ_P0054915 Olfr1271 protein_coding protein_coding MGP_WSBEiJ_T0056197.1 MGP_WSBEiJ_G0025649.1 mouse_genomes_project 2 123657024 123697397 + MGP_WSBEiJ_P0056197 Wdr76 protein_coding protein_coding MGP_WSBEiJ_T0056198.1 MGP_WSBEiJ_G0025649.1 mouse_genomes_project 2 123657033 123697844 + MGP_WSBEiJ_P0056198 Wdr76 protein_coding protein_coding MGP_WSBEiJ_T0017174.1 MGP_WSBEiJ_G0014834.1 mouse_genomes_project 2 33307219 33310321 + Gm13448 processed_transcript processed_transcript MGP_WSBEiJ_T0100698.1 MGP_WSBEiJ_G0039156.1 mouse_genomes_project 2 85574642 85577184 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0057930.1 MGP_WSBEiJ_G0026057.1 mouse_genomes_project 2 164853725 164878870 + MGP_WSBEiJ_P0057930 Lpin3 protein_coding protein_coding MGP_WSBEiJ_T0057931.1 MGP_WSBEiJ_G0026057.1 mouse_genomes_project 2 164861147 164878875 + MGP_WSBEiJ_P0057931 Lpin3 protein_coding protein_coding MGP_WSBEiJ_T0057932.1 MGP_WSBEiJ_G0026057.1 mouse_genomes_project 2 164861147 164878875 + MGP_WSBEiJ_P0057932 Lpin3 protein_coding protein_coding MGP_WSBEiJ_T0057933.1 MGP_WSBEiJ_G0026057.1 mouse_genomes_project 2 164861210 164878665 + MGP_WSBEiJ_P0057933 Lpin3 protein_coding protein_coding MGP_WSBEiJ_T0057934.1 MGP_WSBEiJ_G0026057.1 mouse_genomes_project 2 164874413 164876610 + Lpin3 protein_coding processed_transcript MGP_WSBEiJ_T0007303.1 MGP_WSBEiJ_G0005992.1 mouse_genomes_project 2 173968816 173976093 - 4930529I22Rik lincRNA lincRNA MGP_WSBEiJ_T0054616.1 MGP_WSBEiJ_G0025166.1 mouse_genomes_project 2 85082869 85092426 + MGP_WSBEiJ_P0054616 Med19 protein_coding protein_coding MGP_WSBEiJ_T0054617.1 MGP_WSBEiJ_G0025166.1 mouse_genomes_project 2 85089843 85091710 + Med19 protein_coding processed_transcript MGP_WSBEiJ_T0054961.1 MGP_WSBEiJ_G0025387.1 mouse_genomes_project 2 91583307 91587974 + MGP_WSBEiJ_P0054961 C1qtnf4 protein_coding protein_coding MGP_WSBEiJ_T0052291.1 MGP_WSBEiJ_G0024749.1 mouse_genomes_project 2 24191927 24195905 - Dnlz protein_coding processed_transcript MGP_WSBEiJ_T0052292.1 MGP_WSBEiJ_G0024749.1 mouse_genomes_project 2 24191927 24195915 - MGP_WSBEiJ_P0052292 Dnlz protein_coding protein_coding MGP_WSBEiJ_T0055856.1 MGP_WSBEiJ_G0025592.1 mouse_genomes_project 2 121344717 121356015 + MGP_WSBEiJ_P0055856 Dll4 protein_coding protein_coding MGP_WSBEiJ_T0055857.1 MGP_WSBEiJ_G0025592.1 mouse_genomes_project 2 121348535 121352278 + Dll4 protein_coding processed_transcript MGP_WSBEiJ_T0052153.1 MGP_WSBEiJ_G0024717.1 mouse_genomes_project 2 23262599 23265671 - MGP_WSBEiJ_P0052153 C8g protein_coding protein_coding MGP_WSBEiJ_T0052154.1 MGP_WSBEiJ_G0024717.1 mouse_genomes_project 2 23262599 23264562 - MGP_WSBEiJ_P0052154 C8g protein_coding protein_coding MGP_WSBEiJ_T0052155.1 MGP_WSBEiJ_G0024717.1 mouse_genomes_project 2 23262604 23264204 - C8g protein_coding processed_transcript MGP_WSBEiJ_T0052156.1 MGP_WSBEiJ_G0024717.1 mouse_genomes_project 2 23262604 23263451 - C8g protein_coding processed_transcript MGP_WSBEiJ_T0052157.1 MGP_WSBEiJ_G0024717.1 mouse_genomes_project 2 23262604 23264184 - C8g protein_coding processed_transcript MGP_WSBEiJ_T0052158.1 MGP_WSBEiJ_G0024717.1 mouse_genomes_project 2 23262606 23264192 - C8g protein_coding processed_transcript MGP_WSBEiJ_T0052159.1 MGP_WSBEiJ_G0024717.1 mouse_genomes_project 2 23262845 23264063 - C8g protein_coding processed_transcript MGP_WSBEiJ_T0054317.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73692360 73744180 - MGP_WSBEiJ_P0054317 Atf2 protein_coding protein_coding MGP_WSBEiJ_T0054318.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73693475 73775905 - MGP_WSBEiJ_P0054318 Atf2 protein_coding protein_coding MGP_WSBEiJ_T0054319.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73693486 73775894 - Atf2 protein_coding processed_transcript MGP_WSBEiJ_T0054320.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73695768 73744202 - MGP_WSBEiJ_P0054320 Atf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054321.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73705439 73775879 - Atf2 protein_coding processed_transcript MGP_WSBEiJ_T0054322.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73708916 73775796 - MGP_WSBEiJ_P0054322 Atf2 protein_coding protein_coding MGP_WSBEiJ_T0054323.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73725322 73775894 - Atf2 protein_coding processed_transcript MGP_WSBEiJ_T0054324.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73725886 73775859 - MGP_WSBEiJ_P0054324 Atf2 protein_coding protein_coding MGP_WSBEiJ_T0054325.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73725887 73775819 - MGP_WSBEiJ_P0054325 Atf2 protein_coding protein_coding MGP_WSBEiJ_T0054326.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73726181 73731048 - Atf2 protein_coding processed_transcript MGP_WSBEiJ_T0054327.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73743839 73775860 - Atf2 protein_coding processed_transcript MGP_WSBEiJ_T0054328.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73743932 73775894 - Atf2 protein_coding processed_transcript MGP_WSBEiJ_T0054329.1 MGP_WSBEiJ_G0025105.1 mouse_genomes_project 2 73756503 73775816 - Atf2 protein_coding processed_transcript MGP_WSBEiJ_T0055158.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92900247 93189177 + MGP_WSBEiJ_P0055158 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055159.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92900247 93189177 + MGP_WSBEiJ_P0055159 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055160.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92998978 93186340 + MGP_WSBEiJ_P0055160 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055161.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92999047 93186346 + MGP_WSBEiJ_P0055161 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055162.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92999140 93031372 + Phf21a protein_coding processed_transcript MGP_WSBEiJ_T0055163.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92999148 93142891 + MGP_WSBEiJ_P0055163 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055164.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92999148 93185377 + MGP_WSBEiJ_P0055164 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055165.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92999174 93031881 + Phf21a protein_coding retained_intron MGP_WSBEiJ_T0055166.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 92999174 93038888 + MGP_WSBEiJ_P0055166 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055167.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93000553 93045676 + MGP_WSBEiJ_P0055167 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055168.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93001054 93038891 + MGP_WSBEiJ_P0055168 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055169.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93001078 93185385 + MGP_WSBEiJ_P0055169 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055170.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93002060 93038903 + MGP_WSBEiJ_P0055170 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055171.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93032692 93189177 + MGP_WSBEiJ_P0055171 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055172.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93032692 93189177 + MGP_WSBEiJ_P0055172 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055173.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93032695 93189177 + MGP_WSBEiJ_P0055173 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055174.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93038868 93149709 + MGP_WSBEiJ_P0055174 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055175.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93045679 93184914 + MGP_WSBEiJ_P0055175 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055176.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93143053 93154257 + MGP_WSBEiJ_P0055176 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055177.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93154285 93183661 + MGP_WSBEiJ_P0055177 Phf21a protein_coding protein_coding MGP_WSBEiJ_T0055178.1 MGP_WSBEiJ_G0025416.1 mouse_genomes_project 2 93173348 93181474 + Phf21a protein_coding retained_intron MGP_WSBEiJ_T0017203.1 MGP_WSBEiJ_G0014855.1 mouse_genomes_project 2 85499734 85505846 - processed_transcript processed_transcript MGP_WSBEiJ_T0055427.1 MGP_WSBEiJ_G0025462.1 mouse_genomes_project 2 105286195 105345470 - 4931422A03Rik protein_coding processed_transcript MGP_WSBEiJ_T0055434.1 MGP_WSBEiJ_G0025462.1 mouse_genomes_project 2 105313974 105345979 - MGP_WSBEiJ_P0055434 4931422A03Rik protein_coding protein_coding MGP_WSBEiJ_T0055435.1 MGP_WSBEiJ_G0025462.1 mouse_genomes_project 2 105343561 105346032 - 4931422A03Rik protein_coding retained_intron MGP_WSBEiJ_T0001024.1 MGP_WSBEiJ_G0000959.1 mouse_genomes_project 2 13037091 13038833 + TEC TEC MGP_WSBEiJ_T0051274.1 MGP_WSBEiJ_G0024569.1 mouse_genomes_project 2 247878 293026 + MGP_WSBEiJ_P0051274 Nmt2 protein_coding protein_coding MGP_WSBEiJ_T0051275.1 MGP_WSBEiJ_G0024569.1 mouse_genomes_project 2 247902 272589 + Nmt2 protein_coding processed_transcript MGP_WSBEiJ_T0051276.1 MGP_WSBEiJ_G0024569.1 mouse_genomes_project 2 247918 295180 + MGP_WSBEiJ_P0051276 Nmt2 protein_coding protein_coding MGP_WSBEiJ_T0054736.1 MGP_WSBEiJ_G0025236.1 mouse_genomes_project 2 87089712 87090660 - MGP_WSBEiJ_P0054736 Olfr1079 protein_coding protein_coding MGP_WSBEiJ_T0054737.1 MGP_WSBEiJ_G0025236.1 mouse_genomes_project 2 87089712 87094225 - MGP_WSBEiJ_P0054737 Olfr1079 protein_coding protein_coding MGP_WSBEiJ_T0007276.1 MGP_WSBEiJ_G0005970.1 mouse_genomes_project 2 170248081 170259346 - Platr29 lincRNA lincRNA MGP_WSBEiJ_T0003952.1 MGP_WSBEiJ_G0003518.1 mouse_genomes_project 2 91147250 91153100 + 4933423P22Rik antisense antisense MGP_WSBEiJ_T0003953.1 MGP_WSBEiJ_G0003518.1 mouse_genomes_project 2 91147264 91156412 + 4933423P22Rik antisense antisense MGP_WSBEiJ_T0055143.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92720836 92758303 - MGP_WSBEiJ_P0055143 Dgkz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055144.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92720836 92769778 - MGP_WSBEiJ_P0055144 Dgkz protein_coding protein_coding MGP_WSBEiJ_T0055145.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92720838 92755396 - MGP_WSBEiJ_P0055145 Dgkz protein_coding protein_coding MGP_WSBEiJ_T0055146.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92720839 92758316 - MGP_WSBEiJ_P0055146 Dgkz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055147.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92720839 92739681 - MGP_WSBEiJ_P0055147 Dgkz protein_coding protein_coding MGP_WSBEiJ_T0055148.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92721248 92721945 - Dgkz protein_coding retained_intron MGP_WSBEiJ_T0055149.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92721396 92722594 - Dgkz protein_coding retained_intron MGP_WSBEiJ_T0055150.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92721454 92723512 - Dgkz protein_coding retained_intron MGP_WSBEiJ_T0055151.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92721467 92722524 - Dgkz protein_coding retained_intron MGP_WSBEiJ_T0055152.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92721793 92723613 - Dgkz protein_coding retained_intron MGP_WSBEiJ_T0055153.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92723919 92726037 - Dgkz protein_coding processed_transcript MGP_WSBEiJ_T0055154.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92728766 92739565 - MGP_WSBEiJ_P0055154 Dgkz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055155.1 MGP_WSBEiJ_G0025413.1 mouse_genomes_project 2 92729017 92733300 - Dgkz protein_coding processed_transcript MGP_WSBEiJ_T0055597.1 MGP_WSBEiJ_G0025503.1 mouse_genomes_project 2 112800150 112835437 - MGP_WSBEiJ_P0055597 4930430A15Rik protein_coding protein_coding MGP_WSBEiJ_T0055598.1 MGP_WSBEiJ_G0025503.1 mouse_genomes_project 2 112822372 112864009 - MGP_WSBEiJ_P0055598 4930430A15Rik protein_coding protein_coding MGP_WSBEiJ_T0099362.1 MGP_WSBEiJ_G0038025.1 mouse_genomes_project 2 71791055 71791182 - Gm26408 snoRNA snoRNA MGP_WSBEiJ_T0098137.1 MGP_WSBEiJ_G0036800.1 mouse_genomes_project 2 167596325 167596428 + Gm25881 snRNA snRNA MGP_WSBEiJ_T0055628.1 MGP_WSBEiJ_G0025533.1 mouse_genomes_project 2 113777281 113778220 - MGP_WSBEiJ_P0055628 Olfr1314 protein_coding protein_coding MGP_WSBEiJ_T0007264.1 MGP_WSBEiJ_G0005958.1 mouse_genomes_project 2 163854500 163890278 - Gm14223 lincRNA lincRNA MGP_WSBEiJ_T0013097.1 MGP_WSBEiJ_G0011227.1 mouse_genomes_project 2 15569749 15570014 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003916.1 MGP_WSBEiJ_G0003492.1 mouse_genomes_project 2 66998566 67024046 - Gm13601 antisense antisense MGP_WSBEiJ_T0003874.1 MGP_WSBEiJ_G0003459.1 mouse_genomes_project 2 30473535 30477152 - Gm13610 antisense antisense MGP_WSBEiJ_T0052671.1 MGP_WSBEiJ_G0024814.1 mouse_genomes_project 2 27962685 27989467 + MGP_WSBEiJ_P0052671 Gle1 protein_coding protein_coding MGP_WSBEiJ_T0052672.1 MGP_WSBEiJ_G0024814.1 mouse_genomes_project 2 27962687 27966196 + Gle1 protein_coding retained_intron MGP_WSBEiJ_T0052673.1 MGP_WSBEiJ_G0024814.1 mouse_genomes_project 2 27962782 27966736 + Gle1 protein_coding retained_intron MGP_WSBEiJ_T0052674.1 MGP_WSBEiJ_G0024814.1 mouse_genomes_project 2 27969571 27970997 + Gle1 protein_coding retained_intron MGP_WSBEiJ_T0052675.1 MGP_WSBEiJ_G0024814.1 mouse_genomes_project 2 27969934 27971976 + Gle1 protein_coding retained_intron MGP_WSBEiJ_T0052676.1 MGP_WSBEiJ_G0024814.1 mouse_genomes_project 2 27976233 27977867 + Gle1 protein_coding retained_intron MGP_WSBEiJ_T0052677.1 MGP_WSBEiJ_G0024814.1 mouse_genomes_project 2 27984607 27987313 + Gle1 protein_coding retained_intron MGP_WSBEiJ_T0055228.1 MGP_WSBEiJ_G0025427.1 mouse_genomes_project 2 94077044 94209460 - MGP_WSBEiJ_P0055228 Tspan18 protein_coding protein_coding MGP_WSBEiJ_T0055229.1 MGP_WSBEiJ_G0025427.1 mouse_genomes_project 2 94079437 94102996 - MGP_WSBEiJ_P0055229 Tspan18 protein_coding protein_coding MGP_WSBEiJ_T0055230.1 MGP_WSBEiJ_G0025427.1 mouse_genomes_project 2 94185374 94209478 - Tspan18 protein_coding processed_transcript MGP_WSBEiJ_T0055231.1 MGP_WSBEiJ_G0025427.1 mouse_genomes_project 2 94185374 94187732 - Tspan18 protein_coding processed_transcript MGP_WSBEiJ_T0054369.1 MGP_WSBEiJ_G0025118.1 mouse_genomes_project 2 74655831 74657987 + MGP_WSBEiJ_P0054369 Hoxd1 protein_coding protein_coding MGP_WSBEiJ_T0054543.1 MGP_WSBEiJ_G0025154.1 mouse_genomes_project 2 84014958 84034844 + MGP_WSBEiJ_P0054543 Zc3h15 protein_coding protein_coding MGP_WSBEiJ_T0054544.1 MGP_WSBEiJ_G0025154.1 mouse_genomes_project 2 84015004 84028825 + Zc3h15 protein_coding processed_transcript MGP_WSBEiJ_T0054545.1 MGP_WSBEiJ_G0025154.1 mouse_genomes_project 2 84015060 84024083 + Zc3h15 protein_coding processed_transcript MGP_WSBEiJ_T0054546.1 MGP_WSBEiJ_G0025154.1 mouse_genomes_project 2 84015146 84030690 + Zc3h15 protein_coding processed_transcript MGP_WSBEiJ_T0054547.1 MGP_WSBEiJ_G0025154.1 mouse_genomes_project 2 84015176 84034288 + MGP_WSBEiJ_P0054547 Zc3h15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0054548.1 MGP_WSBEiJ_G0025154.1 mouse_genomes_project 2 84027145 84028587 + Zc3h15 protein_coding processed_transcript MGP_WSBEiJ_T0054549.1 MGP_WSBEiJ_G0025154.1 mouse_genomes_project 2 84027638 84032041 + Zc3h15 protein_coding processed_transcript MGP_WSBEiJ_T0054550.1 MGP_WSBEiJ_G0025154.1 mouse_genomes_project 2 84030516 84034844 + Zc3h15 protein_coding processed_transcript MGP_WSBEiJ_T0010304.1 MGP_WSBEiJ_G0008461.1 mouse_genomes_project 2 162100765 162100827 - Mir7685 miRNA miRNA MGP_WSBEiJ_T0058477.1 MGP_WSBEiJ_G0026198.1 mouse_genomes_project 2 177717298 177792154 - MGP_WSBEiJ_P0058477 Bmp7 protein_coding protein_coding MGP_WSBEiJ_T0058478.1 MGP_WSBEiJ_G0026198.1 mouse_genomes_project 2 177768050 177791925 - Bmp7 protein_coding retained_intron MGP_WSBEiJ_T0057294.1 MGP_WSBEiJ_G0025929.1 mouse_genomes_project 2 156416622 156441290 + MGP_WSBEiJ_P0057294 Mylk2 protein_coding protein_coding MGP_WSBEiJ_T0100728.1 MGP_WSBEiJ_G0039186.1 mouse_genomes_project 2 89252746 89253652 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013130.1 MGP_WSBEiJ_G0011260.1 mouse_genomes_project 2 26771727 26771851 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017194.1 MGP_WSBEiJ_G0014847.1 mouse_genomes_project 2 71522233 71524915 + Gm13663 processed_transcript processed_transcript MGP_WSBEiJ_T0017195.1 MGP_WSBEiJ_G0014847.1 mouse_genomes_project 2 71523190 71524875 + Gm13663 processed_transcript processed_transcript MGP_WSBEiJ_T0007111.1 MGP_WSBEiJ_G0005835.1 mouse_genomes_project 2 66658938 66670893 + Gm1322 lincRNA lincRNA MGP_WSBEiJ_T0054373.1 MGP_WSBEiJ_G0025120.1 mouse_genomes_project 2 75599424 75611135 + MGP_WSBEiJ_P0054373 Hnrnpa3 protein_coding protein_coding MGP_WSBEiJ_T0003808.1 MGP_WSBEiJ_G0003409.1 mouse_genomes_project 2 1126204 1136958 - 1700080N15Rik antisense antisense MGP_WSBEiJ_T0003809.1 MGP_WSBEiJ_G0003409.1 mouse_genomes_project 2 1126206 1136958 - 1700080N15Rik antisense antisense MGP_WSBEiJ_T0003810.1 MGP_WSBEiJ_G0003409.1 mouse_genomes_project 2 1131377 1136956 - 1700080N15Rik antisense antisense MGP_WSBEiJ_T0057151.1 MGP_WSBEiJ_G0025884.1 mouse_genomes_project 2 154210715 154255108 + MGP_WSBEiJ_P0057151 Pygb protein_coding protein_coding MGP_WSBEiJ_T0057152.1 MGP_WSBEiJ_G0025884.1 mouse_genomes_project 2 154212974 154238136 + Pygb protein_coding processed_transcript MGP_WSBEiJ_T0057153.1 MGP_WSBEiJ_G0025884.1 mouse_genomes_project 2 154239455 154241894 + Pygb protein_coding retained_intron MGP_WSBEiJ_T0057154.1 MGP_WSBEiJ_G0025884.1 mouse_genomes_project 2 154246958 154251823 + Pygb protein_coding retained_intron MGP_WSBEiJ_T0057155.1 MGP_WSBEiJ_G0025884.1 mouse_genomes_project 2 154251737 154253984 + Pygb protein_coding retained_intron MGP_WSBEiJ_T0051812.1 MGP_WSBEiJ_G0024658.1 mouse_genomes_project 2 20242434 20317557 + MGP_WSBEiJ_P0051812 Gad2 protein_coding protein_coding MGP_WSBEiJ_T0051813.1 MGP_WSBEiJ_G0024658.1 mouse_genomes_project 2 20243552 20250267 + Gad2 protein_coding processed_transcript MGP_WSBEiJ_T0051629.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11510059 11580733 + MGP_WSBEiJ_P0051629 Stam protein_coding protein_coding MGP_WSBEiJ_T0051630.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11510069 11559721 + Stam protein_coding processed_transcript MGP_WSBEiJ_T0051631.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11510150 11575461 + MGP_WSBEiJ_P0051631 Stam protein_coding protein_coding MGP_WSBEiJ_T0051632.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11510183 11578639 + MGP_WSBEiJ_P0051632 Stam protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051633.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11510388 11560181 + MGP_WSBEiJ_P0051633 Stam protein_coding protein_coding MGP_WSBEiJ_T0051634.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11559444 11560276 + Stam protein_coding retained_intron MGP_WSBEiJ_T0051635.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11560154 11562498 + Stam protein_coding processed_transcript MGP_WSBEiJ_T0051636.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11561951 11570272 + Stam protein_coding retained_intron MGP_WSBEiJ_T0051637.1 MGP_WSBEiJ_G0024626.1 mouse_genomes_project 2 11565229 11570214 + Stam protein_coding retained_intron MGP_WSBEiJ_T0051868.1 MGP_WSBEiJ_G0024670.1 mouse_genomes_project 2 21861546 21869665 + MGP_WSBEiJ_P0051868 Il1f9 protein_coding protein_coding MGP_WSBEiJ_T0003908.1 MGP_WSBEiJ_G0003484.1 mouse_genomes_project 2 62126465 62128010 + Gm13569 antisense antisense MGP_WSBEiJ_T0054815.1 MGP_WSBEiJ_G0025302.1 mouse_genomes_project 2 88754330 88755281 - MGP_WSBEiJ_P0054815 Olfr1163 protein_coding protein_coding MGP_WSBEiJ_T0054847.1 MGP_WSBEiJ_G0025331.1 mouse_genomes_project 2 89831531 89832467 - MGP_WSBEiJ_P0054847 Olfr1214 protein_coding protein_coding MGP_WSBEiJ_T0007305.1 MGP_WSBEiJ_G0005994.1 mouse_genomes_project 2 174211762 174479701 - lincRNA lincRNA MGP_WSBEiJ_T0007306.1 MGP_WSBEiJ_G0005994.1 mouse_genomes_project 2 174211792 174479701 - lincRNA lincRNA MGP_WSBEiJ_T0054077.1 MGP_WSBEiJ_G0025059.1 mouse_genomes_project 2 68766904 68780104 - MGP_WSBEiJ_P0054077 Spc25 protein_coding protein_coding MGP_WSBEiJ_T0054078.1 MGP_WSBEiJ_G0025059.1 mouse_genomes_project 2 68766908 68780406 - MGP_WSBEiJ_P0054078 Spc25 protein_coding protein_coding MGP_WSBEiJ_T0054079.1 MGP_WSBEiJ_G0025059.1 mouse_genomes_project 2 68770156 68779389 - MGP_WSBEiJ_P0054079 Spc25 protein_coding protein_coding MGP_WSBEiJ_T0054080.1 MGP_WSBEiJ_G0025059.1 mouse_genomes_project 2 68770199 68780429 - MGP_WSBEiJ_P0054080 Spc25 protein_coding protein_coding MGP_WSBEiJ_T0054081.1 MGP_WSBEiJ_G0025059.1 mouse_genomes_project 2 68771551 68780372 - Spc25 protein_coding processed_transcript MGP_WSBEiJ_T0054082.1 MGP_WSBEiJ_G0025059.1 mouse_genomes_project 2 68772825 68779474 - Spc25 protein_coding processed_transcript MGP_WSBEiJ_T0054083.1 MGP_WSBEiJ_G0025059.1 mouse_genomes_project 2 68779886 68780428 - Spc25 protein_coding processed_transcript MGP_WSBEiJ_T0051475.1 MGP_WSBEiJ_G0024604.1 mouse_genomes_project 2 7372749 7387000 + Kin protein_coding processed_transcript MGP_WSBEiJ_T0051476.1 MGP_WSBEiJ_G0024604.1 mouse_genomes_project 2 7372780 7387980 + MGP_WSBEiJ_P0051476 Kin protein_coding protein_coding MGP_WSBEiJ_T0051477.1 MGP_WSBEiJ_G0024604.1 mouse_genomes_project 2 7385299 7387360 + Kin protein_coding processed_transcript MGP_WSBEiJ_T0056759.1 MGP_WSBEiJ_G0025784.1 mouse_genomes_project 2 133957932 134010100 - MGP_WSBEiJ_P0056759 Rnf24 protein_coding protein_coding MGP_WSBEiJ_T0056760.1 MGP_WSBEiJ_G0025784.1 mouse_genomes_project 2 133957935 133989768 - MGP_WSBEiJ_P0056760 Rnf24 protein_coding protein_coding MGP_WSBEiJ_T0056761.1 MGP_WSBEiJ_G0025784.1 mouse_genomes_project 2 133959411 133973144 - MGP_WSBEiJ_P0056761 Rnf24 protein_coding protein_coding MGP_WSBEiJ_T0056762.1 MGP_WSBEiJ_G0025784.1 mouse_genomes_project 2 133962980 134010081 - MGP_WSBEiJ_P0056762 Rnf24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056763.1 MGP_WSBEiJ_G0025784.1 mouse_genomes_project 2 133972386 134010111 - Rnf24 protein_coding retained_intron MGP_WSBEiJ_T0010300.1 MGP_WSBEiJ_G0008457.1 mouse_genomes_project 2 156379162 156379222 + Mir5622 miRNA miRNA MGP_WSBEiJ_T0054883.1 MGP_WSBEiJ_G0025358.1 mouse_genomes_project 2 90499682 90500503 - MGP_WSBEiJ_P0054883 protein_coding protein_coding MGP_WSBEiJ_T0052085.1 MGP_WSBEiJ_G0024707.1 mouse_genomes_project 2 23111529 23117337 - MGP_WSBEiJ_P0052085 Uap1l1 protein_coding protein_coding MGP_WSBEiJ_T0052086.1 MGP_WSBEiJ_G0024707.1 mouse_genomes_project 2 23113129 23114373 - Uap1l1 protein_coding processed_transcript MGP_WSBEiJ_T0052087.1 MGP_WSBEiJ_G0024707.1 mouse_genomes_project 2 23113130 23115353 - Uap1l1 protein_coding processed_transcript MGP_WSBEiJ_T0052088.1 MGP_WSBEiJ_G0024707.1 mouse_genomes_project 2 23113134 23115783 - Uap1l1 protein_coding processed_transcript MGP_WSBEiJ_T0052089.1 MGP_WSBEiJ_G0024707.1 mouse_genomes_project 2 23114986 23116312 - Uap1l1 protein_coding processed_transcript MGP_WSBEiJ_T0052090.1 MGP_WSBEiJ_G0024707.1 mouse_genomes_project 2 23115772 23117270 - Uap1l1 protein_coding processed_transcript MGP_WSBEiJ_T0058170.1 MGP_WSBEiJ_G0026132.1 mouse_genomes_project 2 169129634 169137758 + MGP_WSBEiJ_P0058170 Mmp9 protein_coding protein_coding MGP_WSBEiJ_T0058171.1 MGP_WSBEiJ_G0026132.1 mouse_genomes_project 2 169137082 169148710 + MGP_WSBEiJ_P0058171 Mmp9 protein_coding protein_coding MGP_WSBEiJ_T0058172.1 MGP_WSBEiJ_G0026132.1 mouse_genomes_project 2 169139559 169140126 + Mmp9 protein_coding retained_intron MGP_WSBEiJ_T0058173.1 MGP_WSBEiJ_G0026132.1 mouse_genomes_project 2 169143249 169148710 + Mmp9 protein_coding processed_transcript MGP_WSBEiJ_T0056335.1 MGP_WSBEiJ_G0025686.1 mouse_genomes_project 2 128094472 128096164 + MGP_WSBEiJ_P0056335 Eid1 protein_coding protein_coding MGP_WSBEiJ_T0055214.1 MGP_WSBEiJ_G0025423.1 mouse_genomes_project 2 93438247 93454681 + MGP_WSBEiJ_P0055214 Chst1 protein_coding protein_coding MGP_WSBEiJ_T0010175.1 MGP_WSBEiJ_G0008332.1 mouse_genomes_project 2 7777829 7777925 + Mir466f-2 miRNA miRNA MGP_WSBEiJ_T0001067.1 MGP_WSBEiJ_G0001001.1 mouse_genomes_project 2 152214250 152214615 - TEC TEC MGP_WSBEiJ_T0057958.1 MGP_WSBEiJ_G0026062.1 mouse_genomes_project 2 166987478 167019999 + L3mbtl1 protein_coding retained_intron MGP_WSBEiJ_T0057959.1 MGP_WSBEiJ_G0026062.1 mouse_genomes_project 2 166987480 167022496 + MGP_WSBEiJ_P0057959 L3mbtl1 protein_coding protein_coding MGP_WSBEiJ_T0057960.1 MGP_WSBEiJ_G0026062.1 mouse_genomes_project 2 166987481 166993949 + L3mbtl1 protein_coding processed_transcript MGP_WSBEiJ_T0057961.1 MGP_WSBEiJ_G0026062.1 mouse_genomes_project 2 166987481 166994029 + MGP_WSBEiJ_P0057961 L3mbtl1 protein_coding protein_coding MGP_WSBEiJ_T0057962.1 MGP_WSBEiJ_G0026062.1 mouse_genomes_project 2 166987506 166992307 + L3mbtl1 protein_coding processed_transcript MGP_WSBEiJ_T0057963.1 MGP_WSBEiJ_G0026062.1 mouse_genomes_project 2 166993066 166994599 + L3mbtl1 protein_coding processed_transcript MGP_WSBEiJ_T0057964.1 MGP_WSBEiJ_G0026062.1 mouse_genomes_project 2 166993066 166994599 + MGP_WSBEiJ_P0057964 L3mbtl1 protein_coding protein_coding MGP_WSBEiJ_T0098102.1 MGP_WSBEiJ_G0036765.1 mouse_genomes_project 2 54024493 54024634 + Gm25489 snRNA snRNA MGP_WSBEiJ_T0056716.1 MGP_WSBEiJ_G0025774.1 mouse_genomes_project 2 133728141 133745561 - MGP_WSBEiJ_P0056716 Siglec1 protein_coding protein_coding MGP_WSBEiJ_T0056717.1 MGP_WSBEiJ_G0025774.1 mouse_genomes_project 2 133730975 133745561 - MGP_WSBEiJ_P0056717 Siglec1 protein_coding protein_coding MGP_WSBEiJ_T0056718.1 MGP_WSBEiJ_G0025774.1 mouse_genomes_project 2 133742368 133745561 - MGP_WSBEiJ_P0056718 Siglec1 protein_coding protein_coding MGP_WSBEiJ_T0054747.1 MGP_WSBEiJ_G0025246.1 mouse_genomes_project 2 87418680 87419673 + MGP_WSBEiJ_P0054747 Olfr1094 protein_coding protein_coding MGP_WSBEiJ_T0052557.1 MGP_WSBEiJ_G0024797.1 mouse_genomes_project 2 26659946 26777840 + MGP_WSBEiJ_P0052557 Ak8 protein_coding protein_coding MGP_WSBEiJ_T0052558.1 MGP_WSBEiJ_G0024797.1 mouse_genomes_project 2 26659989 26695825 + Ak8 protein_coding processed_transcript MGP_WSBEiJ_T0052559.1 MGP_WSBEiJ_G0024797.1 mouse_genomes_project 2 26703632 26721517 + Ak8 protein_coding processed_transcript MGP_WSBEiJ_T0057625.1 MGP_WSBEiJ_G0026005.1 mouse_genomes_project 2 159794455 159836825 - MGP_WSBEiJ_P0057625 Gm28036 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057626.1 MGP_WSBEiJ_G0026005.1 mouse_genomes_project 2 159794455 159820713 - MGP_WSBEiJ_P0057626 Gm28036 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057641.1 MGP_WSBEiJ_G0026005.1 mouse_genomes_project 2 159801540 159846778 - MGP_WSBEiJ_P0057641 Gm28036 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057642.1 MGP_WSBEiJ_G0026005.1 mouse_genomes_project 2 159801540 159846778 - MGP_WSBEiJ_P0057642 Gm28036 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057643.1 MGP_WSBEiJ_G0026005.1 mouse_genomes_project 2 159801540 159846778 - MGP_WSBEiJ_P0057643 Gm28036 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057644.1 MGP_WSBEiJ_G0026005.1 mouse_genomes_project 2 159801702 159836850 - MGP_WSBEiJ_P0057644 Gm28036 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057645.1 MGP_WSBEiJ_G0026005.1 mouse_genomes_project 2 159801708 159819556 - MGP_WSBEiJ_P0057645 Gm28036 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057646.1 MGP_WSBEiJ_G0026005.1 mouse_genomes_project 2 159802035 159836855 - MGP_WSBEiJ_P0057646 Gm28036 protein_coding protein_coding MGP_WSBEiJ_T0057716.1 MGP_WSBEiJ_G0026014.1 mouse_genomes_project 2 160286155 160304961 + MGP_WSBEiJ_P0057716 Aar2 protein_coding protein_coding MGP_WSBEiJ_T0057717.1 MGP_WSBEiJ_G0026014.1 mouse_genomes_project 2 160286167 160305777 + MGP_WSBEiJ_P0057717 Aar2 protein_coding protein_coding MGP_WSBEiJ_T0057718.1 MGP_WSBEiJ_G0026014.1 mouse_genomes_project 2 160286179 160289280 + Aar2 protein_coding processed_transcript MGP_WSBEiJ_T0057719.1 MGP_WSBEiJ_G0026014.1 mouse_genomes_project 2 160286181 160289661 + MGP_WSBEiJ_P0057719 Aar2 protein_coding protein_coding MGP_WSBEiJ_T0057720.1 MGP_WSBEiJ_G0026014.1 mouse_genomes_project 2 160286195 160289414 + MGP_WSBEiJ_P0057720 Aar2 protein_coding protein_coding MGP_WSBEiJ_T0057222.1 MGP_WSBEiJ_G0025901.1 mouse_genomes_project 2 155630520 155636056 + MGP_WSBEiJ_P0057222 Tcf15 protein_coding protein_coding MGP_WSBEiJ_T0054636.1 MGP_WSBEiJ_G0025173.1 mouse_genomes_project 2 85223894 85236064 - MGP_WSBEiJ_P0054636 Smtnl1 protein_coding protein_coding MGP_WSBEiJ_T0054520.1 MGP_WSBEiJ_G0025147.1 mouse_genomes_project 2 80707586 80748139 - MGP_WSBEiJ_P0054520 Frzb protein_coding protein_coding MGP_WSBEiJ_T0054521.1 MGP_WSBEiJ_G0025147.1 mouse_genomes_project 2 80708730 80737908 - Frzb protein_coding processed_transcript MGP_WSBEiJ_T0003927.1 MGP_WSBEiJ_G0003499.1 mouse_genomes_project 2 72022772 72030380 - Rapgef4os2 antisense antisense MGP_WSBEiJ_T0055862.1 MGP_WSBEiJ_G0025595.1 mouse_genomes_project 2 121544260 121575916 - MGP_WSBEiJ_P0055862 Exd1 protein_coding protein_coding MGP_WSBEiJ_T0055863.1 MGP_WSBEiJ_G0025595.1 mouse_genomes_project 2 121544266 121569951 - MGP_WSBEiJ_P0055863 Exd1 protein_coding protein_coding MGP_WSBEiJ_T0055864.1 MGP_WSBEiJ_G0025595.1 mouse_genomes_project 2 121567288 121575483 - MGP_WSBEiJ_P0055864 Exd1 protein_coding protein_coding MGP_WSBEiJ_T0058008.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167741491 167812341 + Pkig protein_coding retained_intron MGP_WSBEiJ_T0058009.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167741491 167814741 + MGP_WSBEiJ_P0058009 Pkig protein_coding protein_coding MGP_WSBEiJ_T0058010.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167741504 167814737 + MGP_WSBEiJ_P0058010 Pkig protein_coding protein_coding MGP_WSBEiJ_T0058011.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167741520 167814271 + MGP_WSBEiJ_P0058011 Pkig protein_coding protein_coding MGP_WSBEiJ_T0058012.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167741563 167809605 + MGP_WSBEiJ_P0058012 Pkig protein_coding protein_coding MGP_WSBEiJ_T0058013.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167741582 167814374 + MGP_WSBEiJ_P0058013 Pkig protein_coding protein_coding MGP_WSBEiJ_T0058014.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167741585 167814101 + MGP_WSBEiJ_P0058014 Pkig protein_coding protein_coding MGP_WSBEiJ_T0058015.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167744606 167814056 + MGP_WSBEiJ_P0058015 Pkig protein_coding protein_coding MGP_WSBEiJ_T0058016.1 MGP_WSBEiJ_G0026076.1 mouse_genomes_project 2 167779691 167814735 + MGP_WSBEiJ_P0058016 Pkig protein_coding protein_coding MGP_WSBEiJ_T0003826.1 MGP_WSBEiJ_G0003422.1 mouse_genomes_project 2 12194512 12222023 - Gm10848 antisense antisense MGP_WSBEiJ_T0054047.1 MGP_WSBEiJ_G0025052.1 mouse_genomes_project 2 66952799 67034125 + MGP_WSBEiJ_P0054047 Xirp2 protein_coding protein_coding MGP_WSBEiJ_T0054048.1 MGP_WSBEiJ_G0025052.1 mouse_genomes_project 2 66952799 67034133 + MGP_WSBEiJ_P0054048 Xirp2 protein_coding protein_coding MGP_WSBEiJ_T0013245.1 MGP_WSBEiJ_G0011375.1 mouse_genomes_project 2 72973769 72974549 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053717.1 MGP_WSBEiJ_G0024995.1 mouse_genomes_project 2 50992476 51013054 + MGP_WSBEiJ_P0053717 Tnfaip6 protein_coding protein_coding MGP_WSBEiJ_T0058095.1 MGP_WSBEiJ_G0026109.1 mouse_genomes_project 2 168754876 168775326 - MGP_WSBEiJ_P0058095 Wfdc8 protein_coding protein_coding MGP_WSBEiJ_T0058096.1 MGP_WSBEiJ_G0026109.1 mouse_genomes_project 2 168754884 168780953 - MGP_WSBEiJ_P0058096 Wfdc8 protein_coding protein_coding MGP_WSBEiJ_T0058097.1 MGP_WSBEiJ_G0026109.1 mouse_genomes_project 2 168755631 168775326 - MGP_WSBEiJ_P0058097 Wfdc8 protein_coding protein_coding MGP_WSBEiJ_T0058102.1 MGP_WSBEiJ_G0026113.1 mouse_genomes_project 2 168826461 168827784 + MGP_WSBEiJ_P0058102 Wfdc10 protein_coding protein_coding MGP_WSBEiJ_T0013324.1 MGP_WSBEiJ_G0011454.1 mouse_genomes_project 2 101576649 101577993 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054878.1 MGP_WSBEiJ_G0025355.1 mouse_genomes_project 2 90387189 90388113 - MGP_WSBEiJ_P0054878 Olfr1245 protein_coding protein_coding MGP_WSBEiJ_T0056510.1 MGP_WSBEiJ_G0025727.1 mouse_genomes_project 2 131131311 131135191 + MGP_WSBEiJ_P0056510 protein_coding protein_coding MGP_WSBEiJ_T0056511.1 MGP_WSBEiJ_G0025727.1 mouse_genomes_project 2 131131374 131140183 + MGP_WSBEiJ_P0056511 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056512.1 MGP_WSBEiJ_G0025727.1 mouse_genomes_project 2 131135511 131138168 + MGP_WSBEiJ_P0056512 protein_coding protein_coding MGP_WSBEiJ_T0054279.1 MGP_WSBEiJ_G0025096.1 mouse_genomes_project 2 72802561 72820412 - MGP_WSBEiJ_P0054279 Gm11084 protein_coding protein_coding MGP_WSBEiJ_T0004069.1 MGP_WSBEiJ_G0003603.1 mouse_genomes_project 2 167575669 167618893 - Hnf4aos antisense antisense MGP_WSBEiJ_T0004070.1 MGP_WSBEiJ_G0003603.1 mouse_genomes_project 2 167575669 167618893 - Hnf4aos antisense antisense MGP_WSBEiJ_T0004071.1 MGP_WSBEiJ_G0003603.1 mouse_genomes_project 2 167576085 167618865 - Hnf4aos antisense antisense MGP_WSBEiJ_T0054860.1 MGP_WSBEiJ_G0025343.1 mouse_genomes_project 2 90102101 90103120 - MGP_WSBEiJ_P0054860 Olfr1229 protein_coding protein_coding MGP_WSBEiJ_T0054861.1 MGP_WSBEiJ_G0025343.1 mouse_genomes_project 2 90102158 90107872 - MGP_WSBEiJ_P0054861 Olfr1229 protein_coding protein_coding MGP_WSBEiJ_T0055806.1 MGP_WSBEiJ_G0025579.1 mouse_genomes_project 2 121013895 121025945 - MGP_WSBEiJ_P0055806 Ccdc32 protein_coding protein_coding MGP_WSBEiJ_T0055807.1 MGP_WSBEiJ_G0025579.1 mouse_genomes_project 2 121017833 121025945 - MGP_WSBEiJ_P0055807 Ccdc32 protein_coding protein_coding MGP_WSBEiJ_T0055808.1 MGP_WSBEiJ_G0025579.1 mouse_genomes_project 2 121017904 121025929 - MGP_WSBEiJ_P0055808 Ccdc32 protein_coding protein_coding MGP_WSBEiJ_T0054006.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65040310 65108963 + MGP_WSBEiJ_P0054006 protein_coding protein_coding MGP_WSBEiJ_T0054007.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65040310 65176971 + MGP_WSBEiJ_P0054007 protein_coding protein_coding MGP_WSBEiJ_T0054008.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65040350 65042787 + protein_coding retained_intron MGP_WSBEiJ_T0054009.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65086428 65089527 + protein_coding retained_intron MGP_WSBEiJ_T0054010.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65086504 65174599 + MGP_WSBEiJ_P0054010 protein_coding protein_coding MGP_WSBEiJ_T0054011.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65088174 65176971 + MGP_WSBEiJ_P0054011 protein_coding protein_coding MGP_WSBEiJ_T0054012.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65100013 65101597 + protein_coding retained_intron MGP_WSBEiJ_T0054013.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65139061 65149950 + MGP_WSBEiJ_P0054013 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054014.1 MGP_WSBEiJ_G0025044.1 mouse_genomes_project 2 65139084 65149901 + MGP_WSBEiJ_P0054014 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100715.1 MGP_WSBEiJ_G0039173.1 mouse_genomes_project 2 87079072 87080606 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0052997.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30390365 30475290 + MGP_WSBEiJ_P0052997 Prrc2b protein_coding protein_coding MGP_WSBEiJ_T0052998.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30390431 30475275 + MGP_WSBEiJ_P0052998 Prrc2b protein_coding protein_coding MGP_WSBEiJ_T0052999.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30422329 30471914 + MGP_WSBEiJ_P0052999 Prrc2b protein_coding protein_coding MGP_WSBEiJ_T0053000.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30445786 30459095 + Prrc2b protein_coding processed_transcript MGP_WSBEiJ_T0053001.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30451634 30458754 + MGP_WSBEiJ_P0053001 Prrc2b protein_coding protein_coding MGP_WSBEiJ_T0053002.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30455514 30459049 + MGP_WSBEiJ_P0053002 Prrc2b protein_coding protein_coding MGP_WSBEiJ_T0053003.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30456648 30458593 + Prrc2b protein_coding processed_transcript MGP_WSBEiJ_T0053004.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30456716 30460808 + Prrc2b protein_coding processed_transcript MGP_WSBEiJ_T0053005.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30458966 30461760 + Prrc2b protein_coding processed_transcript MGP_WSBEiJ_T0053006.1 MGP_WSBEiJ_G0024862.1 mouse_genomes_project 2 30459204 30460876 + Prrc2b protein_coding processed_transcript MGP_WSBEiJ_T0057247.1 MGP_WSBEiJ_G0025908.1 mouse_genomes_project 2 155903266 155906332 - MGP_WSBEiJ_P0057247 Zcchc3 protein_coding protein_coding MGP_WSBEiJ_T0097318.1 MGP_WSBEiJ_G0035993.1 mouse_genomes_project 2 116738003 116739020 + Gm28492 sense_intronic sense_intronic MGP_WSBEiJ_T0055139.1 MGP_WSBEiJ_G0025412.1 mouse_genomes_project 2 92717760 92719643 - MGP_WSBEiJ_P0055139 Mdk protein_coding protein_coding MGP_WSBEiJ_T0055140.1 MGP_WSBEiJ_G0025412.1 mouse_genomes_project 2 92717783 92720304 - MGP_WSBEiJ_P0055140 Mdk protein_coding protein_coding MGP_WSBEiJ_T0055141.1 MGP_WSBEiJ_G0025412.1 mouse_genomes_project 2 92717783 92719735 - MGP_WSBEiJ_P0055141 Mdk protein_coding protein_coding MGP_WSBEiJ_T0055142.1 MGP_WSBEiJ_G0025412.1 mouse_genomes_project 2 92717921 92719654 - MGP_WSBEiJ_P0055142 Mdk protein_coding protein_coding MGP_WSBEiJ_T0056303.1 MGP_WSBEiJ_G0025676.1 mouse_genomes_project 2 127464172 127486487 + MGP_WSBEiJ_P0056303 Slc24a5 protein_coding protein_coding MGP_WSBEiJ_T0056304.1 MGP_WSBEiJ_G0025676.1 mouse_genomes_project 2 127464229 127477004 + MGP_WSBEiJ_P0056304 Slc24a5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056305.1 MGP_WSBEiJ_G0025676.1 mouse_genomes_project 2 127465291 127481036 + Slc24a5 protein_coding processed_transcript MGP_WSBEiJ_T0056306.1 MGP_WSBEiJ_G0025676.1 mouse_genomes_project 2 127476416 127480889 + Slc24a5 protein_coding retained_intron MGP_WSBEiJ_T0003888.1 MGP_WSBEiJ_G0003470.1 mouse_genomes_project 2 36802400 36803360 - Gm27197 antisense antisense MGP_WSBEiJ_T0057480.1 MGP_WSBEiJ_G0025980.1 mouse_genomes_project 2 158955713 158958583 + MGP_WSBEiJ_P0057480 Map1lc3a protein_coding protein_coding MGP_WSBEiJ_T0057481.1 MGP_WSBEiJ_G0025980.1 mouse_genomes_project 2 158955959 158958580 + Map1lc3a protein_coding processed_transcript MGP_WSBEiJ_T0057482.1 MGP_WSBEiJ_G0025980.1 mouse_genomes_project 2 158956305 158958578 + Map1lc3a protein_coding processed_transcript MGP_WSBEiJ_T0010219.1 MGP_WSBEiJ_G0008376.1 mouse_genomes_project 2 23205769 23205825 + Mir3087 miRNA miRNA MGP_WSBEiJ_T0004074.1 MGP_WSBEiJ_G0003605.1 mouse_genomes_project 2 167769417 167778075 - Gm16316 antisense antisense MGP_WSBEiJ_T0053464.1 MGP_WSBEiJ_G0024949.1 mouse_genomes_project 2 35508703 35512214 + MGP_WSBEiJ_P0053464 Olfr360 protein_coding protein_coding MGP_WSBEiJ_T0053465.1 MGP_WSBEiJ_G0024949.1 mouse_genomes_project 2 35511260 35512214 + MGP_WSBEiJ_P0053465 Olfr360 protein_coding protein_coding MGP_WSBEiJ_T0013268.1 MGP_WSBEiJ_G0011398.1 mouse_genomes_project 2 81184749 81185877 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099378.1 MGP_WSBEiJ_G0038041.1 mouse_genomes_project 2 123093044 123093258 + Gm22865 snoRNA snoRNA MGP_WSBEiJ_T0003897.1 MGP_WSBEiJ_G0003477.1 mouse_genomes_project 2 51352759 51355092 + antisense antisense MGP_WSBEiJ_T0057180.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154926365 154948572 + MGP_WSBEiJ_P0057180 Nsfl1c protein_coding protein_coding MGP_WSBEiJ_T0057181.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154926372 154943842 + Nsfl1c protein_coding retained_intron MGP_WSBEiJ_T0057182.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154926425 154950405 + MGP_WSBEiJ_P0057182 Nsfl1c protein_coding unknown_likely_coding MGP_WSBEiJ_T0057183.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154926473 154937974 + Nsfl1c protein_coding retained_intron MGP_WSBEiJ_T0057184.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154926476 154948567 + MGP_WSBEiJ_P0057184 Nsfl1c protein_coding protein_coding MGP_WSBEiJ_T0057185.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154926487 154948676 + MGP_WSBEiJ_P0057185 Nsfl1c protein_coding protein_coding MGP_WSBEiJ_T0057186.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154926494 154940160 + Nsfl1c protein_coding retained_intron MGP_WSBEiJ_T0057187.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154939063 154946692 + Nsfl1c protein_coding processed_transcript MGP_WSBEiJ_T0057188.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154939716 154948250 + Nsfl1c protein_coding retained_intron MGP_WSBEiJ_T0057189.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154940473 154946722 + Nsfl1c protein_coding retained_intron MGP_WSBEiJ_T0057190.1 MGP_WSBEiJ_G0025890.1 mouse_genomes_project 2 154946129 154948523 + Nsfl1c protein_coding retained_intron MGP_WSBEiJ_T0010276.1 MGP_WSBEiJ_G0008433.1 mouse_genomes_project 2 105152374 105152470 - Gm22761 miRNA miRNA MGP_WSBEiJ_T0055454.1 MGP_WSBEiJ_G0025469.1 mouse_genomes_project 2 105794213 105865687 - MGP_WSBEiJ_P0055454 Hipk3 protein_coding protein_coding MGP_WSBEiJ_T0055455.1 MGP_WSBEiJ_G0025469.1 mouse_genomes_project 2 105797512 105864924 - MGP_WSBEiJ_P0055455 Hipk3 protein_coding protein_coding MGP_WSBEiJ_T0055456.1 MGP_WSBEiJ_G0025469.1 mouse_genomes_project 2 105797586 105865195 - MGP_WSBEiJ_P0055456 Hipk3 protein_coding protein_coding MGP_WSBEiJ_T0055457.1 MGP_WSBEiJ_G0025469.1 mouse_genomes_project 2 105801449 105806920 - Hipk3 protein_coding processed_transcript MGP_WSBEiJ_T0057089.1 MGP_WSBEiJ_G0025858.1 mouse_genomes_project 2 150625475 150631462 + MGP_WSBEiJ_P0057089 Pax1 protein_coding protein_coding MGP_WSBEiJ_T0057090.1 MGP_WSBEiJ_G0025858.1 mouse_genomes_project 2 150628577 150637940 + MGP_WSBEiJ_P0057090 Pax1 protein_coding protein_coding MGP_WSBEiJ_T0057091.1 MGP_WSBEiJ_G0025858.1 mouse_genomes_project 2 150631864 150659255 + Pax1 protein_coding retained_intron MGP_WSBEiJ_T0054746.1 MGP_WSBEiJ_G0025245.1 mouse_genomes_project 2 87372433 87373402 + MGP_WSBEiJ_P0054746 Olfr1093 protein_coding protein_coding MGP_WSBEiJ_T0007157.1 MGP_WSBEiJ_G0005874.1 mouse_genomes_project 2 94338783 94355832 + Gm10804 lincRNA lincRNA MGP_WSBEiJ_T0007158.1 MGP_WSBEiJ_G0005874.1 mouse_genomes_project 2 94338784 94342692 + Gm10804 lincRNA lincRNA MGP_WSBEiJ_T0007159.1 MGP_WSBEiJ_G0005874.1 mouse_genomes_project 2 94338785 94352361 + Gm10804 lincRNA lincRNA MGP_WSBEiJ_T0007160.1 MGP_WSBEiJ_G0005874.1 mouse_genomes_project 2 94354399 94354636 + Gm10804 lincRNA lincRNA MGP_WSBEiJ_T0010314.1 MGP_WSBEiJ_G0008471.1 mouse_genomes_project 2 173116990 173117054 - Mir7004 miRNA miRNA MGP_WSBEiJ_T0003976.1 MGP_WSBEiJ_G0003532.1 mouse_genomes_project 2 115799089 115807193 + C130080G10Rik antisense antisense MGP_WSBEiJ_T0003977.1 MGP_WSBEiJ_G0003532.1 mouse_genomes_project 2 115799150 115807193 + C130080G10Rik antisense antisense MGP_WSBEiJ_T0003978.1 MGP_WSBEiJ_G0003532.1 mouse_genomes_project 2 115800000 115806733 + C130080G10Rik antisense antisense MGP_WSBEiJ_T0003979.1 MGP_WSBEiJ_G0003532.1 mouse_genomes_project 2 115801055 115807039 + C130080G10Rik antisense antisense MGP_WSBEiJ_T0003980.1 MGP_WSBEiJ_G0003532.1 mouse_genomes_project 2 115801080 115810491 + C130080G10Rik antisense antisense MGP_WSBEiJ_T0013261.1 MGP_WSBEiJ_G0011391.1 mouse_genomes_project 2 79249479 79249930 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007053.1 MGP_WSBEiJ_G0005788.1 mouse_genomes_project 2 23343631 23348300 + Gm26702 lincRNA lincRNA MGP_WSBEiJ_T0017148.1 MGP_WSBEiJ_G0014819.1 mouse_genomes_project 2 17073222 17074546 + 1810010K12Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017149.1 MGP_WSBEiJ_G0014819.1 mouse_genomes_project 2 17073864 17076390 + 1810010K12Rik processed_transcript processed_transcript MGP_WSBEiJ_T0053680.1 MGP_WSBEiJ_G0024987.1 mouse_genomes_project 2 48457152 48619494 + MGP_WSBEiJ_P0053680 Kif5c protein_coding protein_coding MGP_WSBEiJ_T0053681.1 MGP_WSBEiJ_G0024987.1 mouse_genomes_project 2 48540876 48574052 + MGP_WSBEiJ_P0053681 Kif5c protein_coding protein_coding MGP_WSBEiJ_T0053682.1 MGP_WSBEiJ_G0024987.1 mouse_genomes_project 2 48565499 48579387 + Kif5c protein_coding processed_transcript MGP_WSBEiJ_T0053683.1 MGP_WSBEiJ_G0024987.1 mouse_genomes_project 2 48576411 48579378 + Kif5c protein_coding processed_transcript MGP_WSBEiJ_T0053684.1 MGP_WSBEiJ_G0024987.1 mouse_genomes_project 2 48588372 48601205 + Kif5c protein_coding processed_transcript MGP_WSBEiJ_T0053685.1 MGP_WSBEiJ_G0024987.1 mouse_genomes_project 2 48596044 48602718 + Kif5c protein_coding processed_transcript MGP_WSBEiJ_T0056087.1 MGP_WSBEiJ_G0025633.1 mouse_genomes_project 2 123235757 123240471 + Adal protein_coding retained_intron MGP_WSBEiJ_T0056088.1 MGP_WSBEiJ_G0025633.1 mouse_genomes_project 2 123235768 123254159 + MGP_WSBEiJ_P0056088 Adal protein_coding protein_coding MGP_WSBEiJ_T0056089.1 MGP_WSBEiJ_G0025633.1 mouse_genomes_project 2 123235773 123240469 + Adal protein_coding retained_intron MGP_WSBEiJ_T0056090.1 MGP_WSBEiJ_G0025633.1 mouse_genomes_project 2 123235782 123245785 + Adal protein_coding processed_transcript MGP_WSBEiJ_T0056091.1 MGP_WSBEiJ_G0025633.1 mouse_genomes_project 2 123235828 123253070 + MGP_WSBEiJ_P0056091 Adal protein_coding protein_coding MGP_WSBEiJ_T0056092.1 MGP_WSBEiJ_G0025633.1 mouse_genomes_project 2 123235850 123245973 + Adal protein_coding retained_intron MGP_WSBEiJ_T0056093.1 MGP_WSBEiJ_G0025633.1 mouse_genomes_project 2 123236124 123253028 + MGP_WSBEiJ_P0056093 Adal protein_coding protein_coding MGP_WSBEiJ_T0056094.1 MGP_WSBEiJ_G0025633.1 mouse_genomes_project 2 123245548 123253820 + Adal protein_coding retained_intron MGP_WSBEiJ_T0051376.1 MGP_WSBEiJ_G0024587.1 mouse_genomes_project 2 2188340 2293438 + MGP_WSBEiJ_P0051376 Ccdc3 protein_coding protein_coding MGP_WSBEiJ_T0007145.1 MGP_WSBEiJ_G0005862.1 mouse_genomes_project 2 79721039 79729458 + Gm26755 lincRNA lincRNA MGP_WSBEiJ_T0057351.1 MGP_WSBEiJ_G0025943.1 mouse_genomes_project 2 156944588 157081594 - MGP_WSBEiJ_P0057351 Nol4l protein_coding protein_coding MGP_WSBEiJ_T0057352.1 MGP_WSBEiJ_G0025943.1 mouse_genomes_project 2 156954956 156990123 - Nol4l protein_coding processed_transcript MGP_WSBEiJ_T0057353.1 MGP_WSBEiJ_G0025943.1 mouse_genomes_project 2 157006637 157041994 - Nol4l protein_coding processed_transcript MGP_WSBEiJ_T0057354.1 MGP_WSBEiJ_G0025943.1 mouse_genomes_project 2 157010461 157029440 - Nol4l protein_coding processed_transcript MGP_WSBEiJ_T0055742.1 MGP_WSBEiJ_G0025565.1 mouse_genomes_project 2 120355722 120397176 + MGP_WSBEiJ_P0055742 Eif2ak4 protein_coding protein_coding MGP_WSBEiJ_T0055743.1 MGP_WSBEiJ_G0025565.1 mouse_genomes_project 2 120355741 120446647 + MGP_WSBEiJ_P0055743 Eif2ak4 protein_coding protein_coding MGP_WSBEiJ_T0055744.1 MGP_WSBEiJ_G0025565.1 mouse_genomes_project 2 120355951 120446821 + MGP_WSBEiJ_P0055744 Eif2ak4 protein_coding protein_coding MGP_WSBEiJ_T0055745.1 MGP_WSBEiJ_G0025565.1 mouse_genomes_project 2 120356216 120446818 + MGP_WSBEiJ_P0055745 Eif2ak4 protein_coding protein_coding MGP_WSBEiJ_T0055746.1 MGP_WSBEiJ_G0025565.1 mouse_genomes_project 2 120356216 120446819 + MGP_WSBEiJ_P0055746 Eif2ak4 protein_coding protein_coding MGP_WSBEiJ_T0055747.1 MGP_WSBEiJ_G0025565.1 mouse_genomes_project 2 120408858 120422933 + MGP_WSBEiJ_P0055747 Eif2ak4 protein_coding protein_coding MGP_WSBEiJ_T0055748.1 MGP_WSBEiJ_G0025565.1 mouse_genomes_project 2 120427761 120433674 + Eif2ak4 protein_coding processed_transcript MGP_WSBEiJ_T0053007.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30477359 30496466 + MGP_WSBEiJ_P0053007 Pomt1 protein_coding protein_coding MGP_WSBEiJ_T0053008.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30477412 30478470 + Pomt1 protein_coding retained_intron MGP_WSBEiJ_T0053009.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30477441 30485467 + Pomt1 protein_coding retained_intron MGP_WSBEiJ_T0053010.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30477454 30496466 + Pomt1 protein_coding retained_intron MGP_WSBEiJ_T0053011.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30477806 30485092 + MGP_WSBEiJ_P0053011 Pomt1 protein_coding protein_coding MGP_WSBEiJ_T0053012.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30478108 30485182 + MGP_WSBEiJ_P0053012 Pomt1 protein_coding protein_coding MGP_WSBEiJ_T0053013.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30485828 30492379 + MGP_WSBEiJ_P0053013 Pomt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053014.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30486759 30490161 + Pomt1 protein_coding retained_intron MGP_WSBEiJ_T0053015.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30489042 30493228 + Pomt1 protein_coding retained_intron MGP_WSBEiJ_T0053016.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30490132 30495259 + MGP_WSBEiJ_P0053016 Pomt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053017.1 MGP_WSBEiJ_G0024863.1 mouse_genomes_project 2 30492729 30494149 + Pomt1 protein_coding retained_intron MGP_WSBEiJ_T0057390.1 MGP_WSBEiJ_G0025955.1 mouse_genomes_project 2 157738958 157747035 + MGP_WSBEiJ_P0057390 Bpifa3 protein_coding protein_coding MGP_WSBEiJ_T0057391.1 MGP_WSBEiJ_G0025955.1 mouse_genomes_project 2 157738958 157747035 + MGP_WSBEiJ_P0057391 Bpifa3 protein_coding protein_coding MGP_WSBEiJ_T0057392.1 MGP_WSBEiJ_G0025955.1 mouse_genomes_project 2 157744149 157746299 + MGP_WSBEiJ_P0057392 Bpifa3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011305.1 MGP_WSBEiJ_G0009462.1 mouse_genomes_project 2 78774306 78774536 - Gm23149 misc_RNA misc_RNA MGP_WSBEiJ_T0057262.1 MGP_WSBEiJ_G0025920.1 mouse_genomes_project 2 156101036 156110284 + MGP_WSBEiJ_P0057262 Defb36 protein_coding protein_coding MGP_WSBEiJ_T0004049.1 MGP_WSBEiJ_G0003585.1 mouse_genomes_project 2 157213949 157215546 - Dnmt3bos antisense antisense MGP_WSBEiJ_T0100713.1 MGP_WSBEiJ_G0039171.1 mouse_genomes_project 2 87039910 87040799 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0057124.1 MGP_WSBEiJ_G0025875.1 mouse_genomes_project 2 152752906 152756397 + MGP_WSBEiJ_P0057124 Cst10 protein_coding protein_coding MGP_WSBEiJ_T0057125.1 MGP_WSBEiJ_G0025875.1 mouse_genomes_project 2 152753098 152756397 + MGP_WSBEiJ_P0057125 Cst10 protein_coding protein_coding MGP_WSBEiJ_T0057126.1 MGP_WSBEiJ_G0025875.1 mouse_genomes_project 2 152753182 152756397 + MGP_WSBEiJ_P0057126 Cst10 protein_coding protein_coding MGP_WSBEiJ_T0099369.1 MGP_WSBEiJ_G0038032.1 mouse_genomes_project 2 98067426 98067549 + Gm22957 snoRNA snoRNA MGP_WSBEiJ_T0058507.1 MGP_WSBEiJ_G0026207.1 mouse_genomes_project 2 178458415 178468104 - MGP_WSBEiJ_P0058507 Ankrd60 protein_coding protein_coding MGP_WSBEiJ_T0058508.1 MGP_WSBEiJ_G0026207.1 mouse_genomes_project 2 178458453 178467937 - MGP_WSBEiJ_P0058508 Ankrd60 protein_coding protein_coding MGP_WSBEiJ_T0058509.1 MGP_WSBEiJ_G0026207.1 mouse_genomes_project 2 178462126 178468012 - Ankrd60 protein_coding processed_transcript MGP_WSBEiJ_T0052965.1 MGP_WSBEiJ_G0024856.1 mouse_genomes_project 2 30027544 30063331 - MGP_WSBEiJ_P0052965 Fibcd1 protein_coding protein_coding MGP_WSBEiJ_T0057749.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160688472 160760209 - MGP_WSBEiJ_P0057749 Ndrg3 protein_coding protein_coding MGP_WSBEiJ_T0057750.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160688472 160760222 - MGP_WSBEiJ_P0057750 Ndrg3 protein_coding protein_coding MGP_WSBEiJ_T0057751.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160689530 160706484 - Ndrg3 protein_coding processed_transcript MGP_WSBEiJ_T0057752.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160692279 160696068 - Ndrg3 protein_coding processed_transcript MGP_WSBEiJ_T0057753.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160695367 160760201 - MGP_WSBEiJ_P0057753 Ndrg3 protein_coding protein_coding MGP_WSBEiJ_T0057754.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160699591 160715799 - Ndrg3 protein_coding processed_transcript MGP_WSBEiJ_T0057755.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160708425 160760166 - Ndrg3 protein_coding processed_transcript MGP_WSBEiJ_T0057756.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160710668 160760093 - Ndrg3 protein_coding processed_transcript MGP_WSBEiJ_T0057757.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160718752 160760213 - Ndrg3 protein_coding retained_intron MGP_WSBEiJ_T0057758.1 MGP_WSBEiJ_G0026021.1 mouse_genomes_project 2 160733895 160760162 - Ndrg3 protein_coding processed_transcript MGP_WSBEiJ_T0007168.1 MGP_WSBEiJ_G0005881.1 mouse_genomes_project 2 103100833 103111669 + Gm13905 lincRNA lincRNA MGP_WSBEiJ_T0100257.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178469048 178549216 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100258.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178470166 178549216 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100259.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178470927 178521374 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100260.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178474633 178549216 - transcribed_unprocessed_pseudogene retained_intron MGP_WSBEiJ_T0100261.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178475578 178480481 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100262.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178476312 178481032 - transcribed_unprocessed_pseudogene retained_intron MGP_WSBEiJ_T0100263.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178485839 178549045 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100264.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178485839 178549216 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100265.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178486866 178498552 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100266.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178486880 178549317 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100267.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178498213 178549181 - transcribed_unprocessed_pseudogene retained_intron MGP_WSBEiJ_T0100268.1 MGP_WSBEiJ_G0038789.1 mouse_genomes_project 2 178505790 178549212 - transcribed_unprocessed_pseudogene retained_intron MGP_WSBEiJ_T0056277.1 MGP_WSBEiJ_G0025673.1 mouse_genomes_project 2 125029246 125041119 + MGP_WSBEiJ_P0056277 Bloc1s6 protein_coding protein_coding MGP_WSBEiJ_T0056278.1 MGP_WSBEiJ_G0025673.1 mouse_genomes_project 2 125029248 125037621 + Bloc1s6 protein_coding processed_transcript MGP_WSBEiJ_T0056279.1 MGP_WSBEiJ_G0025673.1 mouse_genomes_project 2 125029254 125039742 + Bloc1s6 protein_coding processed_transcript MGP_WSBEiJ_T0056280.1 MGP_WSBEiJ_G0025673.1 mouse_genomes_project 2 125029262 125029892 + Bloc1s6 protein_coding processed_transcript MGP_WSBEiJ_T0056281.1 MGP_WSBEiJ_G0025673.1 mouse_genomes_project 2 125029265 125037687 + Bloc1s6 protein_coding processed_transcript MGP_WSBEiJ_T0056282.1 MGP_WSBEiJ_G0025673.1 mouse_genomes_project 2 125029294 125038647 + Bloc1s6 protein_coding processed_transcript MGP_WSBEiJ_T0003857.1 MGP_WSBEiJ_G0003444.1 mouse_genomes_project 2 25012707 25031942 - Dbhos antisense antisense MGP_WSBEiJ_T0053284.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33051660 33139443 - MGP_WSBEiJ_P0053284 Gapvd1 protein_coding protein_coding MGP_WSBEiJ_T0053285.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33053246 33138733 - MGP_WSBEiJ_P0053285 Gapvd1 protein_coding protein_coding MGP_WSBEiJ_T0053286.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33054051 33138827 - MGP_WSBEiJ_P0053286 Gapvd1 protein_coding protein_coding MGP_WSBEiJ_T0053287.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33054051 33138827 - MGP_WSBEiJ_P0053287 Gapvd1 protein_coding protein_coding MGP_WSBEiJ_T0053288.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33054549 33079839 - MGP_WSBEiJ_P0053288 Gapvd1 protein_coding protein_coding MGP_WSBEiJ_T0053289.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33054960 33059827 - MGP_WSBEiJ_P0053289 Gapvd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053290.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33068968 33080099 - Gapvd1 protein_coding processed_transcript MGP_WSBEiJ_T0053291.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33072596 33076569 - Gapvd1 protein_coding retained_intron MGP_WSBEiJ_T0053292.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33075339 33105204 - MGP_WSBEiJ_P0053292 Gapvd1 protein_coding protein_coding MGP_WSBEiJ_T0053293.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33075360 33105107 - MGP_WSBEiJ_P0053293 Gapvd1 protein_coding protein_coding MGP_WSBEiJ_T0053294.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33079755 33088398 - MGP_WSBEiJ_P0053294 Gapvd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053295.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33079799 33088513 - Gapvd1 protein_coding processed_transcript MGP_WSBEiJ_T0053296.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33085407 33088909 - Gapvd1 protein_coding retained_intron MGP_WSBEiJ_T0053297.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33102522 33138691 - Gapvd1 protein_coding retained_intron MGP_WSBEiJ_T0053298.1 MGP_WSBEiJ_G0024904.1 mouse_genomes_project 2 33105177 33138677 - MGP_WSBEiJ_P0053298 Gapvd1 protein_coding protein_coding MGP_WSBEiJ_T0057836.1 MGP_WSBEiJ_G0026037.1 mouse_genomes_project 2 161878084 161930689 + MGP_WSBEiJ_P0057836 Rprd1b protein_coding protein_coding MGP_WSBEiJ_T0057837.1 MGP_WSBEiJ_G0026037.1 mouse_genomes_project 2 161878095 161898335 + Rprd1b protein_coding retained_intron MGP_WSBEiJ_T0057838.1 MGP_WSBEiJ_G0026037.1 mouse_genomes_project 2 161878279 161930689 + Rprd1b protein_coding processed_transcript MGP_WSBEiJ_T0057839.1 MGP_WSBEiJ_G0026037.1 mouse_genomes_project 2 161878288 161930689 + MGP_WSBEiJ_P0057839 Rprd1b protein_coding protein_coding MGP_WSBEiJ_T0057840.1 MGP_WSBEiJ_G0026037.1 mouse_genomes_project 2 161878308 161930689 + MGP_WSBEiJ_P0057840 Rprd1b protein_coding protein_coding MGP_WSBEiJ_T0057841.1 MGP_WSBEiJ_G0026037.1 mouse_genomes_project 2 161878386 161987457 + MGP_WSBEiJ_P0057841 Rprd1b protein_coding protein_coding MGP_WSBEiJ_T0057842.1 MGP_WSBEiJ_G0026037.1 mouse_genomes_project 2 161893047 161927554 + MGP_WSBEiJ_P0057842 Rprd1b protein_coding protein_coding MGP_WSBEiJ_T0057843.1 MGP_WSBEiJ_G0026037.1 mouse_genomes_project 2 161897583 161922996 + MGP_WSBEiJ_P0057843 Rprd1b protein_coding protein_coding MGP_WSBEiJ_T0007246.1 MGP_WSBEiJ_G0005943.1 mouse_genomes_project 2 153099807 153146343 - Gm14133 lincRNA lincRNA MGP_WSBEiJ_T0010309.1 MGP_WSBEiJ_G0008466.1 mouse_genomes_project 2 168476951 168477022 - Mir7678 miRNA miRNA MGP_WSBEiJ_T0003871.1 MGP_WSBEiJ_G0003456.1 mouse_genomes_project 2 30106494 30111974 - Gm13441 antisense antisense MGP_WSBEiJ_T0052207.1 MGP_WSBEiJ_G0024727.1 mouse_genomes_project 2 23397579 23400942 - MGP_WSBEiJ_P0052207 Fcna protein_coding protein_coding MGP_WSBEiJ_T0052208.1 MGP_WSBEiJ_G0024727.1 mouse_genomes_project 2 23397878 23400198 - Fcna protein_coding processed_transcript MGP_WSBEiJ_T0098084.1 MGP_WSBEiJ_G0036747.1 mouse_genomes_project 2 4528007 4528104 + Gm24340 snRNA snRNA MGP_WSBEiJ_T0013300.1 MGP_WSBEiJ_G0011430.1 mouse_genomes_project 2 89299810 89306124 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055102.1 MGP_WSBEiJ_G0025405.1 mouse_genomes_project 2 92386977 92398118 - MGP_WSBEiJ_P0055102 F2 protein_coding protein_coding MGP_WSBEiJ_T0055103.1 MGP_WSBEiJ_G0025405.1 mouse_genomes_project 2 92386986 92398111 - MGP_WSBEiJ_P0055103 F2 protein_coding protein_coding MGP_WSBEiJ_T0055104.1 MGP_WSBEiJ_G0025405.1 mouse_genomes_project 2 92392866 92398099 - F2 protein_coding processed_transcript MGP_WSBEiJ_T0054104.1 MGP_WSBEiJ_G0025066.1 mouse_genomes_project 2 69304587 69334389 - MGP_WSBEiJ_P0054104 Fastkd1 protein_coding protein_coding MGP_WSBEiJ_T0054105.1 MGP_WSBEiJ_G0025066.1 mouse_genomes_project 2 69304705 69334244 - MGP_WSBEiJ_P0054105 Fastkd1 protein_coding protein_coding MGP_WSBEiJ_T0054106.1 MGP_WSBEiJ_G0025066.1 mouse_genomes_project 2 69324721 69335287 - Fastkd1 protein_coding retained_intron MGP_WSBEiJ_T0054107.1 MGP_WSBEiJ_G0025066.1 mouse_genomes_project 2 69329390 69335305 - Fastkd1 protein_coding retained_intron MGP_WSBEiJ_T0098140.1 MGP_WSBEiJ_G0036803.1 mouse_genomes_project 2 185866319 185866426 + Gm22502 snRNA snRNA MGP_WSBEiJ_T0007161.1 MGP_WSBEiJ_G0005875.1 mouse_genomes_project 2 95169523 95183449 - lincRNA lincRNA MGP_WSBEiJ_T0007162.1 MGP_WSBEiJ_G0005875.1 mouse_genomes_project 2 95178609 95183468 - lincRNA lincRNA MGP_WSBEiJ_T0098104.1 MGP_WSBEiJ_G0036767.1 mouse_genomes_project 2 71186978 71187079 - Gm23166 snRNA snRNA MGP_WSBEiJ_T0017239.1 MGP_WSBEiJ_G0014874.1 mouse_genomes_project 2 111491897 111502880 - Platr8 processed_transcript processed_transcript MGP_WSBEiJ_T0007100.1 MGP_WSBEiJ_G0005825.1 mouse_genomes_project 2 54448575 54458845 + Gm14033 lincRNA lincRNA MGP_WSBEiJ_T0007101.1 MGP_WSBEiJ_G0005825.1 mouse_genomes_project 2 54448600 54470998 + Gm14033 lincRNA lincRNA MGP_WSBEiJ_T0058041.1 MGP_WSBEiJ_G0026087.1 mouse_genomes_project 2 168301760 168306296 - MGP_WSBEiJ_P0058041 Wfdc12 protein_coding protein_coding MGP_WSBEiJ_T0010301.1 MGP_WSBEiJ_G0008458.1 mouse_genomes_project 2 159037402 159037511 + Mir695 miRNA miRNA MGP_WSBEiJ_T0013260.1 MGP_WSBEiJ_G0011390.1 mouse_genomes_project 2 79070325 79070493 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013481.1 MGP_WSBEiJ_G0011611.1 mouse_genomes_project 2 163794941 163795807 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054514.1 MGP_WSBEiJ_G0025145.1 mouse_genomes_project 2 80569911 80572795 + MGP_WSBEiJ_P0054514 Prdx6b protein_coding protein_coding MGP_WSBEiJ_T0013483.1 MGP_WSBEiJ_G0011613.1 mouse_genomes_project 2 165248827 165251112 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052513.1 MGP_WSBEiJ_G0024788.1 mouse_genomes_project 2 26416408 26419522 + MGP_WSBEiJ_P0052513 Mrps2 protein_coding protein_coding MGP_WSBEiJ_T0052514.1 MGP_WSBEiJ_G0024788.1 mouse_genomes_project 2 26416424 26419509 + Mrps2 protein_coding processed_transcript MGP_WSBEiJ_T0052515.1 MGP_WSBEiJ_G0024788.1 mouse_genomes_project 2 26416432 26419509 + Mrps2 protein_coding processed_transcript MGP_WSBEiJ_T0013355.1 MGP_WSBEiJ_G0011485.1 mouse_genomes_project 2 112811761 112816532 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057112.1 MGP_WSBEiJ_G0025869.1 mouse_genomes_project 2 152103896 152107960 + MGP_WSBEiJ_P0057112 Cst12 protein_coding protein_coding MGP_WSBEiJ_T0057113.1 MGP_WSBEiJ_G0025869.1 mouse_genomes_project 2 152103907 152108069 + MGP_WSBEiJ_P0057113 Cst12 protein_coding protein_coding MGP_WSBEiJ_T0054310.1 MGP_WSBEiJ_G0025104.1 mouse_genomes_project 2 73487424 73537007 - MGP_WSBEiJ_P0054310 Chn1 protein_coding protein_coding MGP_WSBEiJ_T0054311.1 MGP_WSBEiJ_G0025104.1 mouse_genomes_project 2 73487432 73652184 - MGP_WSBEiJ_P0054311 Chn1 protein_coding protein_coding MGP_WSBEiJ_T0054312.1 MGP_WSBEiJ_G0025104.1 mouse_genomes_project 2 73487432 73652184 - MGP_WSBEiJ_P0054312 Chn1 protein_coding protein_coding MGP_WSBEiJ_T0054313.1 MGP_WSBEiJ_G0025104.1 mouse_genomes_project 2 73489849 73593841 - MGP_WSBEiJ_P0054313 Chn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054314.1 MGP_WSBEiJ_G0025104.1 mouse_genomes_project 2 73504172 73532131 - MGP_WSBEiJ_P0054314 Chn1 protein_coding protein_coding MGP_WSBEiJ_T0054315.1 MGP_WSBEiJ_G0025104.1 mouse_genomes_project 2 73504887 73652164 - MGP_WSBEiJ_P0054315 Chn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054316.1 MGP_WSBEiJ_G0025104.1 mouse_genomes_project 2 73554392 73651879 - MGP_WSBEiJ_P0054316 Chn1 protein_coding protein_coding MGP_WSBEiJ_T0053741.1 MGP_WSBEiJ_G0024999.1 mouse_genomes_project 2 51397794 51663752 - MGP_WSBEiJ_P0053741 Cacnb4 protein_coding protein_coding MGP_WSBEiJ_T0053742.1 MGP_WSBEiJ_G0024999.1 mouse_genomes_project 2 51397799 51539608 - MGP_WSBEiJ_P0053742 Cacnb4 protein_coding protein_coding MGP_WSBEiJ_T0053743.1 MGP_WSBEiJ_G0024999.1 mouse_genomes_project 2 51397799 51663991 - MGP_WSBEiJ_P0053743 Cacnb4 protein_coding protein_coding MGP_WSBEiJ_T0053744.1 MGP_WSBEiJ_G0024999.1 mouse_genomes_project 2 51397799 51539615 - MGP_WSBEiJ_P0053744 Cacnb4 protein_coding protein_coding MGP_WSBEiJ_T0053745.1 MGP_WSBEiJ_G0024999.1 mouse_genomes_project 2 51537231 51537754 - Cacnb4 protein_coding processed_transcript MGP_WSBEiJ_T0053746.1 MGP_WSBEiJ_G0024999.1 mouse_genomes_project 2 51662901 51663316 - Cacnb4 protein_coding processed_transcript MGP_WSBEiJ_T0003811.1 MGP_WSBEiJ_G0003410.1 mouse_genomes_project 2 1465534 1473775 - Gm13175 antisense antisense MGP_WSBEiJ_T0056509.1 MGP_WSBEiJ_G0025726.1 mouse_genomes_project 2 130997310 130998564 + MGP_WSBEiJ_P0056509 protein_coding protein_coding MGP_WSBEiJ_T0051478.1 MGP_WSBEiJ_G0024605.1 mouse_genomes_project 2 7389829 7428040 - MGP_WSBEiJ_P0051478 Itih2 protein_coding protein_coding MGP_WSBEiJ_T0051479.1 MGP_WSBEiJ_G0024605.1 mouse_genomes_project 2 7405783 7428450 - MGP_WSBEiJ_P0051479 Itih2 protein_coding protein_coding MGP_WSBEiJ_T0051480.1 MGP_WSBEiJ_G0024605.1 mouse_genomes_project 2 7423657 7428761 - MGP_WSBEiJ_P0051480 Itih2 protein_coding protein_coding MGP_WSBEiJ_T0051699.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15629759 15796670 + MGP_WSBEiJ_P0051699 Mllt10 protein_coding protein_coding MGP_WSBEiJ_T0051700.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15638936 15703599 + Mllt10 protein_coding processed_transcript MGP_WSBEiJ_T0051701.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15639178 15796671 + MGP_WSBEiJ_P0051701 Mllt10 protein_coding protein_coding MGP_WSBEiJ_T0051702.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15639226 15707429 + Mllt10 protein_coding processed_transcript MGP_WSBEiJ_T0051703.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15639229 15794545 + MGP_WSBEiJ_P0051703 Mllt10 protein_coding protein_coding MGP_WSBEiJ_T0051704.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15639347 15705063 + Mllt10 protein_coding processed_transcript MGP_WSBEiJ_T0051705.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15639376 15689720 + Mllt10 protein_coding processed_transcript MGP_WSBEiJ_T0051706.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15639383 15639798 + Mllt10 protein_coding processed_transcript MGP_WSBEiJ_T0051707.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15668684 15790727 + MGP_WSBEiJ_P0051707 Mllt10 protein_coding protein_coding MGP_WSBEiJ_T0051708.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15704959 15743170 + Mllt10 protein_coding processed_transcript MGP_WSBEiJ_T0051709.1 MGP_WSBEiJ_G0024640.1 mouse_genomes_project 2 15753823 15770428 + Mllt10 protein_coding processed_transcript MGP_WSBEiJ_T0057954.1 MGP_WSBEiJ_G0026061.1 mouse_genomes_project 2 166975375 166979052 + Srsf6 protein_coding retained_intron MGP_WSBEiJ_T0057955.1 MGP_WSBEiJ_G0026061.1 mouse_genomes_project 2 166975375 166980968 + MGP_WSBEiJ_P0057955 Srsf6 protein_coding protein_coding MGP_WSBEiJ_T0057956.1 MGP_WSBEiJ_G0026061.1 mouse_genomes_project 2 166975409 166978870 + MGP_WSBEiJ_P0057956 Srsf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057957.1 MGP_WSBEiJ_G0026061.1 mouse_genomes_project 2 166975508 166977353 + MGP_WSBEiJ_P0057957 Srsf6 protein_coding protein_coding MGP_WSBEiJ_T0013213.1 MGP_WSBEiJ_G0011343.1 mouse_genomes_project 2 59269453 59269762 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100064.1 MGP_WSBEiJ_G0038682.1 mouse_genomes_project 2 153684051 153684731 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100065.1 MGP_WSBEiJ_G0038682.1 mouse_genomes_project 2 153684284 153685036 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0007065.1 MGP_WSBEiJ_G0005797.1 mouse_genomes_project 2 28762548 28774744 - Gm14486 lincRNA lincRNA MGP_WSBEiJ_T0007066.1 MGP_WSBEiJ_G0005797.1 mouse_genomes_project 2 28762693 28782835 - Gm14486 lincRNA lincRNA MGP_WSBEiJ_T0100693.1 MGP_WSBEiJ_G0039151.1 mouse_genomes_project 2 35547443 35547697 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098109.1 MGP_WSBEiJ_G0036772.1 mouse_genomes_project 2 80874633 80874736 + Gm24461 snRNA snRNA MGP_WSBEiJ_T0099341.1 MGP_WSBEiJ_G0038004.1 mouse_genomes_project 2 30465055 30465140 + Gm25632 snoRNA snoRNA MGP_WSBEiJ_T0057994.1 MGP_WSBEiJ_G0026073.1 mouse_genomes_project 2 167588656 167630911 + MGP_WSBEiJ_P0057994 Hnf4a protein_coding protein_coding MGP_WSBEiJ_T0057995.1 MGP_WSBEiJ_G0026073.1 mouse_genomes_project 2 167623970 167637335 + Hnf4a protein_coding processed_transcript MGP_WSBEiJ_T0057996.1 MGP_WSBEiJ_G0026073.1 mouse_genomes_project 2 167624340 167652635 + MGP_WSBEiJ_P0057996 Hnf4a protein_coding protein_coding MGP_WSBEiJ_T0057997.1 MGP_WSBEiJ_G0026073.1 mouse_genomes_project 2 167624341 167652630 + MGP_WSBEiJ_P0057997 Hnf4a protein_coding protein_coding MGP_WSBEiJ_T0057998.1 MGP_WSBEiJ_G0026073.1 mouse_genomes_project 2 167627248 167637334 + MGP_WSBEiJ_P0057998 Hnf4a protein_coding protein_coding MGP_WSBEiJ_T0013288.1 MGP_WSBEiJ_G0011418.1 mouse_genomes_project 2 87779556 87780779 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056331.1 MGP_WSBEiJ_G0025685.1 mouse_genomes_project 2 128050076 128094403 - MGP_WSBEiJ_P0056331 Shc4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056332.1 MGP_WSBEiJ_G0025685.1 mouse_genomes_project 2 128050084 128095011 - MGP_WSBEiJ_P0056332 Shc4 protein_coding protein_coding MGP_WSBEiJ_T0056333.1 MGP_WSBEiJ_G0025685.1 mouse_genomes_project 2 128050084 128150017 - MGP_WSBEiJ_P0056333 Shc4 protein_coding protein_coding MGP_WSBEiJ_T0056334.1 MGP_WSBEiJ_G0025685.1 mouse_genomes_project 2 128051632 128094881 - MGP_WSBEiJ_P0056334 Shc4 protein_coding protein_coding MGP_WSBEiJ_T0056336.1 MGP_WSBEiJ_G0025685.1 mouse_genomes_project 2 128117477 128150778 - Shc4 protein_coding retained_intron MGP_WSBEiJ_T0055675.1 MGP_WSBEiJ_G0025549.1 mouse_genomes_project 2 115523192 115572284 - MGP_WSBEiJ_P0055675 Scg5 protein_coding protein_coding MGP_WSBEiJ_T0055676.1 MGP_WSBEiJ_G0025549.1 mouse_genomes_project 2 115570499 115571922 - Scg5 protein_coding processed_transcript MGP_WSBEiJ_T0003910.1 MGP_WSBEiJ_G0003486.1 mouse_genomes_project 2 64929013 64932341 + Gm13595 antisense antisense MGP_WSBEiJ_T0056488.1 MGP_WSBEiJ_G0025721.1 mouse_genomes_project 2 130242591 130294756 - MGP_WSBEiJ_P0056488 Nphp1 protein_coding protein_coding MGP_WSBEiJ_T0056489.1 MGP_WSBEiJ_G0025721.1 mouse_genomes_project 2 130242593 130246399 - Nphp1 protein_coding processed_transcript MGP_WSBEiJ_T0056490.1 MGP_WSBEiJ_G0025721.1 mouse_genomes_project 2 130242595 130294799 - MGP_WSBEiJ_P0056490 Nphp1 protein_coding protein_coding MGP_WSBEiJ_T0056491.1 MGP_WSBEiJ_G0025721.1 mouse_genomes_project 2 130247473 130256475 - Nphp1 protein_coding retained_intron MGP_WSBEiJ_T0056524.1 MGP_WSBEiJ_G0025729.1 mouse_genomes_project 2 131241921 131352764 + MGP_WSBEiJ_P0056524 Mertk protein_coding protein_coding MGP_WSBEiJ_T0056525.1 MGP_WSBEiJ_G0025729.1 mouse_genomes_project 2 131317249 131347149 + Mertk protein_coding processed_transcript MGP_WSBEiJ_T0013188.1 MGP_WSBEiJ_G0011318.1 mouse_genomes_project 2 50754903 50755568 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052615.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27777278 27804255 - MGP_WSBEiJ_P0052615 Trub2 protein_coding protein_coding MGP_WSBEiJ_T0052618.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27791405 27804267 - MGP_WSBEiJ_P0052618 Trub2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052619.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27792799 27805109 - MGP_WSBEiJ_P0052619 Trub2 protein_coding protein_coding MGP_WSBEiJ_T0052620.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27794221 27804241 - MGP_WSBEiJ_P0052620 Trub2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052621.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27794290 27804229 - MGP_WSBEiJ_P0052621 Trub2 protein_coding protein_coding MGP_WSBEiJ_T0052622.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27795127 27804278 - MGP_WSBEiJ_P0052622 Trub2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052623.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27795286 27798947 - Trub2 protein_coding retained_intron MGP_WSBEiJ_T0052624.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27795742 27798801 - Trub2 protein_coding retained_intron MGP_WSBEiJ_T0052625.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27799823 27804237 - Trub2 protein_coding retained_intron MGP_WSBEiJ_T0052626.1 MGP_WSBEiJ_G0024808.1 mouse_genomes_project 2 27801522 27804240 - Trub2 protein_coding retained_intron MGP_WSBEiJ_T0054761.1 MGP_WSBEiJ_G0025259.1 mouse_genomes_project 2 87704568 87705507 - MGP_WSBEiJ_P0054761 Olfr1109 protein_coding protein_coding MGP_WSBEiJ_T0053966.1 MGP_WSBEiJ_G0025038.1 mouse_genomes_project 2 62004750 62515460 - MGP_WSBEiJ_P0053966 protein_coding protein_coding MGP_WSBEiJ_T0053967.1 MGP_WSBEiJ_G0025038.1 mouse_genomes_project 2 62102409 62515469 - MGP_WSBEiJ_P0053967 protein_coding protein_coding MGP_WSBEiJ_T0053968.1 MGP_WSBEiJ_G0025038.1 mouse_genomes_project 2 62102495 62515352 - MGP_WSBEiJ_P0053968 protein_coding protein_coding MGP_WSBEiJ_T0053969.1 MGP_WSBEiJ_G0025038.1 mouse_genomes_project 2 62512636 62515444 - protein_coding processed_transcript MGP_WSBEiJ_T0056246.1 MGP_WSBEiJ_G0025665.1 mouse_genomes_project 2 124522972 124527630 - MGP_WSBEiJ_P0056246 Duoxa1 protein_coding protein_coding MGP_WSBEiJ_T0056247.1 MGP_WSBEiJ_G0025665.1 mouse_genomes_project 2 124524331 124534369 - MGP_WSBEiJ_P0056247 Duoxa1 protein_coding protein_coding MGP_WSBEiJ_T0056248.1 MGP_WSBEiJ_G0025665.1 mouse_genomes_project 2 124524334 124526493 - Duoxa1 protein_coding processed_transcript MGP_WSBEiJ_T0056249.1 MGP_WSBEiJ_G0025665.1 mouse_genomes_project 2 124524526 124527608 - MGP_WSBEiJ_P0056249 Duoxa1 protein_coding protein_coding MGP_WSBEiJ_T0056250.1 MGP_WSBEiJ_G0025665.1 mouse_genomes_project 2 124525550 124534406 - MGP_WSBEiJ_P0056250 Duoxa1 protein_coding protein_coding MGP_WSBEiJ_T0056251.1 MGP_WSBEiJ_G0025665.1 mouse_genomes_project 2 124525996 124534320 - MGP_WSBEiJ_P0056251 Duoxa1 protein_coding protein_coding MGP_WSBEiJ_T0056252.1 MGP_WSBEiJ_G0025665.1 mouse_genomes_project 2 124526375 124534327 - MGP_WSBEiJ_P0056252 Duoxa1 protein_coding protein_coding MGP_WSBEiJ_T0010228.1 MGP_WSBEiJ_G0008385.1 mouse_genomes_project 2 27864525 27864590 + Mir219b miRNA miRNA MGP_WSBEiJ_T0013170.1 MGP_WSBEiJ_G0011300.1 mouse_genomes_project 2 44042930 44043164 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058569.1 MGP_WSBEiJ_G0026223.1 mouse_genomes_project 2 183418489 183482967 - MGP_WSBEiJ_P0058569 protein_coding protein_coding MGP_WSBEiJ_T0058570.1 MGP_WSBEiJ_G0026223.1 mouse_genomes_project 2 183419320 183447982 - protein_coding processed_transcript MGP_WSBEiJ_T0058571.1 MGP_WSBEiJ_G0026223.1 mouse_genomes_project 2 183442445 183448322 - protein_coding retained_intron MGP_WSBEiJ_T0099329.1 MGP_WSBEiJ_G0037992.1 mouse_genomes_project 2 17316397 17316529 + Gm24670 snoRNA snoRNA MGP_WSBEiJ_T0004035.1 MGP_WSBEiJ_G0003572.1 mouse_genomes_project 2 148738474 148742805 - Gm14092 antisense antisense MGP_WSBEiJ_T0057050.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149139349 149244980 + MGP_WSBEiJ_P0057050 protein_coding protein_coding MGP_WSBEiJ_T0057051.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149139349 149170264 + MGP_WSBEiJ_P0057051 protein_coding protein_coding MGP_WSBEiJ_T0057052.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149139370 149172262 + MGP_WSBEiJ_P0057052 protein_coding protein_coding MGP_WSBEiJ_T0057053.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149139370 149169492 + MGP_WSBEiJ_P0057053 protein_coding protein_coding MGP_WSBEiJ_T0057054.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149139373 149169347 + MGP_WSBEiJ_P0057054 protein_coding protein_coding MGP_WSBEiJ_T0057055.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149139379 149416671 + MGP_WSBEiJ_P0057055 protein_coding protein_coding MGP_WSBEiJ_T0057056.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149139381 149159631 + MGP_WSBEiJ_P0057056 protein_coding protein_coding MGP_WSBEiJ_T0057057.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149243405 149298557 + protein_coding processed_transcript MGP_WSBEiJ_T0057058.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149247223 149336057 + protein_coding retained_intron MGP_WSBEiJ_T0057059.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149247355 149336188 + MGP_WSBEiJ_P0057059 protein_coding protein_coding MGP_WSBEiJ_T0057060.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149249158 149416667 + protein_coding processed_transcript MGP_WSBEiJ_T0057061.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149358608 149416590 + protein_coding processed_transcript MGP_WSBEiJ_T0057062.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149415894 149416667 + protein_coding processed_transcript MGP_WSBEiJ_T0057063.1 MGP_WSBEiJ_G0025850.1 mouse_genomes_project 2 149416242 149416425 + MGP_WSBEiJ_P0057063 protein_coding protein_coding MGP_WSBEiJ_T0056951.1 MGP_WSBEiJ_G0025826.1 mouse_genomes_project 2 145730291 146022259 - MGP_WSBEiJ_P0056951 Kif16b protein_coding protein_coding MGP_WSBEiJ_T0056952.1 MGP_WSBEiJ_G0025826.1 mouse_genomes_project 2 145731527 145760440 - Kif16b protein_coding retained_intron MGP_WSBEiJ_T0056953.1 MGP_WSBEiJ_G0025826.1 mouse_genomes_project 2 145732591 146022099 - MGP_WSBEiJ_P0056953 Kif16b protein_coding unknown_likely_coding MGP_WSBEiJ_T0010286.1 MGP_WSBEiJ_G0008443.1 mouse_genomes_project 2 129359328 129359464 - Mir3473g miRNA miRNA MGP_WSBEiJ_T0052040.1 MGP_WSBEiJ_G0024699.1 mouse_genomes_project 2 23001039 23008292 + MGP_WSBEiJ_P0052040 Tprn protein_coding protein_coding MGP_WSBEiJ_T0052041.1 MGP_WSBEiJ_G0024699.1 mouse_genomes_project 2 23002662 23007963 + Tprn protein_coding processed_transcript MGP_WSBEiJ_T0052042.1 MGP_WSBEiJ_G0024699.1 mouse_genomes_project 2 23005969 23007578 + Tprn protein_coding processed_transcript MGP_WSBEiJ_T0052043.1 MGP_WSBEiJ_G0024699.1 mouse_genomes_project 2 23007342 23007922 + Tprn protein_coding processed_transcript MGP_WSBEiJ_T0058526.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179221634 179279770 + MGP_WSBEiJ_P0058526 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058527.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179221634 179236188 + MGP_WSBEiJ_P0058527 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058528.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179237153 179288148 + Gnas protein_coding processed_transcript MGP_WSBEiJ_T0058529.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179237153 179288358 + MGP_WSBEiJ_P0058529 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058530.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179237153 179288148 + MGP_WSBEiJ_P0058530 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058531.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179237153 179241313 + MGP_WSBEiJ_P0058531 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058532.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179237153 179288390 + MGP_WSBEiJ_P0058532 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058533.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179268253 179286887 + Gnas protein_coding processed_transcript MGP_WSBEiJ_T0058534.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179268382 179288148 + Gnas protein_coding processed_transcript MGP_WSBEiJ_T0058535.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179268413 179269629 + Gnas protein_coding processed_transcript MGP_WSBEiJ_T0058536.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179268706 179286925 + Gnas protein_coding processed_transcript MGP_WSBEiJ_T0058537.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179270689 179288390 + MGP_WSBEiJ_P0058537 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058538.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179270780 179288390 + MGP_WSBEiJ_P0058538 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058539.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179270979 179288034 + MGP_WSBEiJ_P0058539 Gnas protein_coding protein_coding MGP_WSBEiJ_T0058541.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179283352 179287055 + Gnas protein_coding retained_intron MGP_WSBEiJ_T0058542.1 MGP_WSBEiJ_G0026213.1 mouse_genomes_project 2 179286295 179287374 + Gnas protein_coding retained_intron MGP_WSBEiJ_T0052698.1 MGP_WSBEiJ_G0024817.1 mouse_genomes_project 2 28115416 28118858 + MGP_WSBEiJ_P0052698 Pkn3 protein_coding protein_coding MGP_WSBEiJ_T0052699.1 MGP_WSBEiJ_G0024817.1 mouse_genomes_project 2 28115475 28131544 + Pkn3 protein_coding retained_intron MGP_WSBEiJ_T0052700.1 MGP_WSBEiJ_G0024817.1 mouse_genomes_project 2 28115945 28117715 + MGP_WSBEiJ_P0052700 Pkn3 protein_coding protein_coding MGP_WSBEiJ_T0052701.1 MGP_WSBEiJ_G0024817.1 mouse_genomes_project 2 28116316 28131550 + MGP_WSBEiJ_P0052701 Pkn3 protein_coding protein_coding MGP_WSBEiJ_T0052702.1 MGP_WSBEiJ_G0024817.1 mouse_genomes_project 2 28116430 28123309 + Pkn3 protein_coding retained_intron MGP_WSBEiJ_T0052703.1 MGP_WSBEiJ_G0024817.1 mouse_genomes_project 2 28116486 28131553 + Pkn3 protein_coding retained_intron MGP_WSBEiJ_T0052704.1 MGP_WSBEiJ_G0024817.1 mouse_genomes_project 2 28118583 28120954 + Pkn3 protein_coding retained_intron MGP_WSBEiJ_T0052705.1 MGP_WSBEiJ_G0024817.1 mouse_genomes_project 2 28122424 28124807 + Pkn3 protein_coding retained_intron MGP_WSBEiJ_T0001036.1 MGP_WSBEiJ_G0000971.1 mouse_genomes_project 2 34526526 34529698 - TEC TEC MGP_WSBEiJ_T0004064.1 MGP_WSBEiJ_G0003599.1 mouse_genomes_project 2 164812230 164861068 - Gm16751 antisense antisense MGP_WSBEiJ_T0096811.1 MGP_WSBEiJ_G0035492.1 mouse_genomes_project 2 27752580 27752911 - pseudogene pseudogene MGP_WSBEiJ_T0051946.1 MGP_WSBEiJ_G0024682.1 mouse_genomes_project 2 22699457 22700439 - MGP_WSBEiJ_P0051946 Mrpl41 protein_coding protein_coding MGP_WSBEiJ_T0051947.1 MGP_WSBEiJ_G0024682.1 mouse_genomes_project 2 22699835 22700330 - MGP_WSBEiJ_P0051947 Mrpl41 protein_coding protein_coding MGP_WSBEiJ_T0003974.1 MGP_WSBEiJ_G0003530.1 mouse_genomes_project 2 115241524 115244865 - Gm13964 antisense antisense MGP_WSBEiJ_T0099390.1 MGP_WSBEiJ_G0038053.1 mouse_genomes_project 2 147440528 147440766 - Snord17 snoRNA snoRNA MGP_WSBEiJ_T0099367.1 MGP_WSBEiJ_G0038030.1 mouse_genomes_project 2 95551661 95551792 + Gm24318 snoRNA snoRNA MGP_WSBEiJ_T0056612.1 MGP_WSBEiJ_G0025752.1 mouse_genomes_project 2 132897442 132904099 - MGP_WSBEiJ_P0056612 Idh3b protein_coding protein_coding MGP_WSBEiJ_T0056613.1 MGP_WSBEiJ_G0025752.1 mouse_genomes_project 2 132897446 132898685 - MGP_WSBEiJ_P0056613 Idh3b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056614.1 MGP_WSBEiJ_G0025752.1 mouse_genomes_project 2 132900278 132903986 - Idh3b protein_coding retained_intron MGP_WSBEiJ_T0056615.1 MGP_WSBEiJ_G0025752.1 mouse_genomes_project 2 132903214 132903967 - Idh3b protein_coding retained_intron MGP_WSBEiJ_T0010259.1 MGP_WSBEiJ_G0008416.1 mouse_genomes_project 2 76288059 76288173 + Gm44337 miRNA miRNA MGP_WSBEiJ_T0004091.1 MGP_WSBEiJ_G0003618.1 mouse_genomes_project 2 175017348 175026773 + antisense antisense MGP_WSBEiJ_T0057076.1 MGP_WSBEiJ_G0025853.1 mouse_genomes_project 2 150108963 150228598 + MGP_WSBEiJ_P0057076 Kiz protein_coding protein_coding MGP_WSBEiJ_T0057077.1 MGP_WSBEiJ_G0025853.1 mouse_genomes_project 2 150109008 150144636 + MGP_WSBEiJ_P0057077 Kiz protein_coding protein_coding MGP_WSBEiJ_T0057079.1 MGP_WSBEiJ_G0025853.1 mouse_genomes_project 2 150210392 150228593 + Kiz protein_coding retained_intron MGP_WSBEiJ_T0053486.1 MGP_WSBEiJ_G0024959.1 mouse_genomes_project 2 35867494 35878433 - MGP_WSBEiJ_P0053486 Zbtb26 protein_coding protein_coding MGP_WSBEiJ_T0053487.1 MGP_WSBEiJ_G0024959.1 mouse_genomes_project 2 35870344 35878432 - MGP_WSBEiJ_P0053487 Zbtb26 protein_coding protein_coding MGP_WSBEiJ_T0053488.1 MGP_WSBEiJ_G0024959.1 mouse_genomes_project 2 35873802 35878447 - Zbtb26 protein_coding processed_transcript MGP_WSBEiJ_T0055777.1 MGP_WSBEiJ_G0025572.1 mouse_genomes_project 2 120737222 120745720 - MGP_WSBEiJ_P0055777 protein_coding protein_coding MGP_WSBEiJ_T0055778.1 MGP_WSBEiJ_G0025572.1 mouse_genomes_project 2 120740556 120745684 - protein_coding retained_intron MGP_WSBEiJ_T0097316.1 MGP_WSBEiJ_G0035991.1 mouse_genomes_project 2 18576251 18585786 - Gm13380 sense_intronic sense_intronic MGP_WSBEiJ_T0010211.1 MGP_WSBEiJ_G0008368.1 mouse_genomes_project 2 15123987 15124100 + Mir6419 miRNA miRNA MGP_WSBEiJ_T0056812.1 MGP_WSBEiJ_G0025795.1 mouse_genomes_project 2 134958149 134994223 + MGP_WSBEiJ_P0056812 Cds2 protein_coding protein_coding MGP_WSBEiJ_T0056813.1 MGP_WSBEiJ_G0025795.1 mouse_genomes_project 2 134958149 135009987 + MGP_WSBEiJ_P0056813 Cds2 protein_coding protein_coding MGP_WSBEiJ_T0056814.1 MGP_WSBEiJ_G0025795.1 mouse_genomes_project 2 134958242 134995301 + MGP_WSBEiJ_P0056814 Cds2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056815.1 MGP_WSBEiJ_G0025795.1 mouse_genomes_project 2 134982075 134993603 + MGP_WSBEiJ_P0056815 Cds2 protein_coding protein_coding MGP_WSBEiJ_T0056816.1 MGP_WSBEiJ_G0025795.1 mouse_genomes_project 2 134982838 135009987 + MGP_WSBEiJ_P0056816 Cds2 protein_coding protein_coding MGP_WSBEiJ_T0056817.1 MGP_WSBEiJ_G0025795.1 mouse_genomes_project 2 134999325 135003358 + MGP_WSBEiJ_P0056817 Cds2 protein_coding protein_coding MGP_WSBEiJ_T0013457.1 MGP_WSBEiJ_G0011587.1 mouse_genomes_project 2 158385634 158385855 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056199.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123700380 123938454 - MGP_WSBEiJ_P0056199 Frmd5 protein_coding protein_coding MGP_WSBEiJ_T0056200.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123700380 123746635 - MGP_WSBEiJ_P0056200 Frmd5 protein_coding protein_coding MGP_WSBEiJ_T0056201.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123700380 123987366 - MGP_WSBEiJ_P0056201 Frmd5 protein_coding protein_coding MGP_WSBEiJ_T0056202.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123702589 123711750 - MGP_WSBEiJ_P0056202 Frmd5 protein_coding protein_coding MGP_WSBEiJ_T0056203.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123703147 123938454 - MGP_WSBEiJ_P0056203 Frmd5 protein_coding protein_coding MGP_WSBEiJ_T0056204.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123703149 123987302 - MGP_WSBEiJ_P0056204 Frmd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056205.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123703150 123987271 - MGP_WSBEiJ_P0056205 Frmd5 protein_coding protein_coding MGP_WSBEiJ_T0056206.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123703498 123987110 - MGP_WSBEiJ_P0056206 Frmd5 protein_coding protein_coding MGP_WSBEiJ_T0056207.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123703891 123714721 - Frmd5 protein_coding processed_transcript MGP_WSBEiJ_T0056208.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123717343 123987336 - Frmd5 protein_coding retained_intron MGP_WSBEiJ_T0056209.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123724937 123987151 - MGP_WSBEiJ_P0056209 Frmd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056210.1 MGP_WSBEiJ_G0025650.1 mouse_genomes_project 2 123724989 123744207 - Frmd5 protein_coding processed_transcript MGP_WSBEiJ_T0017139.1 MGP_WSBEiJ_G0014814.1 mouse_genomes_project 2 10665872 10721750 + Gm13270 processed_transcript antisense MGP_WSBEiJ_T0017140.1 MGP_WSBEiJ_G0014814.1 mouse_genomes_project 2 10665873 10668497 + Gm13270 processed_transcript retained_intron MGP_WSBEiJ_T0055496.1 MGP_WSBEiJ_G0025480.1 mouse_genomes_project 2 106633020 106798258 + MGP_WSBEiJ_P0055496 Them7 protein_coding protein_coding MGP_WSBEiJ_T0055497.1 MGP_WSBEiJ_G0025480.1 mouse_genomes_project 2 106633042 106797497 + Them7 protein_coding processed_transcript MGP_WSBEiJ_T0013180.1 MGP_WSBEiJ_G0011310.1 mouse_genomes_project 2 48520047 48520525 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057743.1 MGP_WSBEiJ_G0026019.1 mouse_genomes_project 2 160618864 160629300 + MGP_WSBEiJ_P0057743 1110008F13Rik protein_coding protein_coding MGP_WSBEiJ_T0057744.1 MGP_WSBEiJ_G0026019.1 mouse_genomes_project 2 160618875 160629135 + 1110008F13Rik protein_coding processed_transcript MGP_WSBEiJ_T0057745.1 MGP_WSBEiJ_G0026019.1 mouse_genomes_project 2 160618881 160622724 + 1110008F13Rik protein_coding retained_intron MGP_WSBEiJ_T0057747.1 MGP_WSBEiJ_G0026019.1 mouse_genomes_project 2 160628278 160629133 + 1110008F13Rik protein_coding processed_transcript MGP_WSBEiJ_T0100719.1 MGP_WSBEiJ_G0039177.1 mouse_genomes_project 2 88207623 88358931 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010239.1 MGP_WSBEiJ_G0008396.1 mouse_genomes_project 2 30957712 30957849 - Mir8093 miRNA miRNA MGP_WSBEiJ_T0098083.1 MGP_WSBEiJ_G0036746.1 mouse_genomes_project 2 2327053 2327240 - Gm23118 snRNA snRNA MGP_WSBEiJ_T0052011.1 MGP_WSBEiJ_G0024692.1 mouse_genomes_project 2 22962447 22963579 - protein_coding processed_transcript MGP_WSBEiJ_T0013326.1 MGP_WSBEiJ_G0011456.1 mouse_genomes_project 2 103410977 103411471 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054141.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69536208 69670601 + MGP_WSBEiJ_P0054141 Ubr3 protein_coding protein_coding MGP_WSBEiJ_T0054142.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69536208 69670601 + MGP_WSBEiJ_P0054142 Ubr3 protein_coding protein_coding MGP_WSBEiJ_T0054143.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69536265 69581682 + MGP_WSBEiJ_P0054143 Ubr3 protein_coding protein_coding MGP_WSBEiJ_T0054144.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69579013 69588323 + Ubr3 protein_coding processed_transcript MGP_WSBEiJ_T0054145.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69633620 69654818 + MGP_WSBEiJ_P0054145 Ubr3 protein_coding protein_coding MGP_WSBEiJ_T0054146.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69638512 69669133 + Ubr3 protein_coding processed_transcript MGP_WSBEiJ_T0054147.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69645347 69654956 + Ubr3 protein_coding processed_transcript MGP_WSBEiJ_T0054148.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69654636 69663053 + Ubr3 protein_coding processed_transcript MGP_WSBEiJ_T0054149.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69666715 69667774 + Ubr3 protein_coding processed_transcript MGP_WSBEiJ_T0054150.1 MGP_WSBEiJ_G0025073.1 mouse_genomes_project 2 69667099 69668808 + Ubr3 protein_coding processed_transcript MGP_WSBEiJ_T0007180.1 MGP_WSBEiJ_G0005890.1 mouse_genomes_project 2 107915650 107979213 - Gm14015 lincRNA lincRNA MGP_WSBEiJ_T0017335.1 MGP_WSBEiJ_G0014919.1 mouse_genomes_project 2 185095036 185097189 + 4921531C22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017336.1 MGP_WSBEiJ_G0014919.1 mouse_genomes_project 2 185095624 185096163 + 4921531C22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0010181.1 MGP_WSBEiJ_G0008338.1 mouse_genomes_project 2 7783229 7783356 + Gm26073 miRNA miRNA MGP_WSBEiJ_T0100253.1 MGP_WSBEiJ_G0038786.1 mouse_genomes_project 2 35702422 35706345 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100254.1 MGP_WSBEiJ_G0038786.1 mouse_genomes_project 2 35705913 35706858 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0010212.1 MGP_WSBEiJ_G0008369.1 mouse_genomes_project 2 15632364 15632422 + Mir7655 miRNA miRNA MGP_WSBEiJ_T0053833.1 MGP_WSBEiJ_G0025019.1 mouse_genomes_project 2 58627740 58650723 + MGP_WSBEiJ_P0053833 Dapl1 protein_coding protein_coding MGP_WSBEiJ_T0053834.1 MGP_WSBEiJ_G0025019.1 mouse_genomes_project 2 58627756 58650723 + Dapl1 protein_coding processed_transcript MGP_WSBEiJ_T0013294.1 MGP_WSBEiJ_G0011424.1 mouse_genomes_project 2 88232893 88233186 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004039.1 MGP_WSBEiJ_G0003576.1 mouse_genomes_project 2 150625078 150625960 - AI646519 antisense antisense MGP_WSBEiJ_T0017279.1 MGP_WSBEiJ_G0014890.1 mouse_genomes_project 2 131783807 131804247 - 9830144P21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017280.1 MGP_WSBEiJ_G0014890.1 mouse_genomes_project 2 131801988 131808369 - 9830144P21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0052936.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29760883 29805676 + MGP_WSBEiJ_P0052936 Fubp3 protein_coding protein_coding MGP_WSBEiJ_T0052937.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29761021 29783484 + MGP_WSBEiJ_P0052937 Fubp3 protein_coding protein_coding MGP_WSBEiJ_T0052938.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29761022 29773132 + Fubp3 protein_coding retained_intron MGP_WSBEiJ_T0052939.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29761044 29786775 + MGP_WSBEiJ_P0052939 Fubp3 protein_coding protein_coding MGP_WSBEiJ_T0052940.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29761047 29805669 + MGP_WSBEiJ_P0052940 Fubp3 protein_coding protein_coding MGP_WSBEiJ_T0052941.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29761057 29786761 + MGP_WSBEiJ_P0052941 Fubp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052942.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29791483 29801263 + MGP_WSBEiJ_P0052942 Fubp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052943.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29792918 29804088 + MGP_WSBEiJ_P0052943 Fubp3 protein_coding protein_coding MGP_WSBEiJ_T0052944.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29800686 29804866 + MGP_WSBEiJ_P0052944 Fubp3 protein_coding protein_coding MGP_WSBEiJ_T0052945.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29802916 29805668 + MGP_WSBEiJ_P0052945 Fubp3 protein_coding protein_coding MGP_WSBEiJ_T0052946.1 MGP_WSBEiJ_G0024851.1 mouse_genomes_project 2 29803334 29805670 + Fubp3 protein_coding retained_intron MGP_WSBEiJ_T0051863.1 MGP_WSBEiJ_G0024668.1 mouse_genomes_project 2 21669004 21708524 - MGP_WSBEiJ_P0051863 Hnmt protein_coding protein_coding MGP_WSBEiJ_T0051864.1 MGP_WSBEiJ_G0024668.1 mouse_genomes_project 2 21669034 21708210 - MGP_WSBEiJ_P0051864 Hnmt protein_coding protein_coding MGP_WSBEiJ_T0051865.1 MGP_WSBEiJ_G0024668.1 mouse_genomes_project 2 21669623 21707997 - MGP_WSBEiJ_P0051865 Hnmt protein_coding protein_coding MGP_WSBEiJ_T0007229.1 MGP_WSBEiJ_G0005929.1 mouse_genomes_project 2 138535241 138541823 - Gm14211 lincRNA lincRNA MGP_WSBEiJ_T0052260.1 MGP_WSBEiJ_G0024743.1 mouse_genomes_project 2 23880291 23920287 - MGP_WSBEiJ_P0052260 Nacc2 protein_coding protein_coding MGP_WSBEiJ_T0052261.1 MGP_WSBEiJ_G0024743.1 mouse_genomes_project 2 23880291 23953592 - MGP_WSBEiJ_P0052261 Nacc2 protein_coding protein_coding MGP_WSBEiJ_T0052262.1 MGP_WSBEiJ_G0024743.1 mouse_genomes_project 2 23885804 23887231 - Nacc2 protein_coding processed_transcript MGP_WSBEiJ_T0052263.1 MGP_WSBEiJ_G0024743.1 mouse_genomes_project 2 23889110 23919929 - Nacc2 protein_coding processed_transcript MGP_WSBEiJ_T0052264.1 MGP_WSBEiJ_G0024743.1 mouse_genomes_project 2 23889232 23918482 - Nacc2 protein_coding processed_transcript MGP_WSBEiJ_T0052265.1 MGP_WSBEiJ_G0024743.1 mouse_genomes_project 2 23917913 23953994 - Nacc2 protein_coding processed_transcript MGP_WSBEiJ_T0052266.1 MGP_WSBEiJ_G0024743.1 mouse_genomes_project 2 23918192 23953557 - MGP_WSBEiJ_P0052266 Nacc2 protein_coding protein_coding MGP_WSBEiJ_T0052267.1 MGP_WSBEiJ_G0024743.1 mouse_genomes_project 2 23918434 23953562 - Nacc2 protein_coding processed_transcript MGP_WSBEiJ_T0013424.1 MGP_WSBEiJ_G0011554.1 mouse_genomes_project 2 147039400 147039733 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001069.1 MGP_WSBEiJ_G0001003.1 mouse_genomes_project 2 160600577 160603923 - TEC TEC MGP_WSBEiJ_T0017318.1 MGP_WSBEiJ_G0014908.1 mouse_genomes_project 2 163890242 163924795 + 4933416E03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0055311.1 MGP_WSBEiJ_G0025441.1 mouse_genomes_project 2 102772052 102847153 - MGP_WSBEiJ_P0055311 B230118H07Rik protein_coding protein_coding MGP_WSBEiJ_T0055312.1 MGP_WSBEiJ_G0025441.1 mouse_genomes_project 2 102777435 102791677 - MGP_WSBEiJ_P0055312 B230118H07Rik protein_coding protein_coding MGP_WSBEiJ_T0055313.1 MGP_WSBEiJ_G0025441.1 mouse_genomes_project 2 102777536 102847105 - MGP_WSBEiJ_P0055313 B230118H07Rik protein_coding protein_coding MGP_WSBEiJ_T0055314.1 MGP_WSBEiJ_G0025441.1 mouse_genomes_project 2 102777540 102801110 - B230118H07Rik protein_coding processed_transcript MGP_WSBEiJ_T0055315.1 MGP_WSBEiJ_G0025441.1 mouse_genomes_project 2 102791586 102846034 - MGP_WSBEiJ_P0055315 B230118H07Rik protein_coding protein_coding MGP_WSBEiJ_T0055316.1 MGP_WSBEiJ_G0025441.1 mouse_genomes_project 2 102825977 102847172 - B230118H07Rik protein_coding retained_intron MGP_WSBEiJ_T0055317.1 MGP_WSBEiJ_G0025441.1 mouse_genomes_project 2 102826503 102837679 - B230118H07Rik protein_coding retained_intron MGP_WSBEiJ_T0055318.1 MGP_WSBEiJ_G0025441.1 mouse_genomes_project 2 102827013 102867685 - B230118H07Rik protein_coding retained_intron MGP_WSBEiJ_T0013329.1 MGP_WSBEiJ_G0011459.1 mouse_genomes_project 2 103555199 103555493 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013247.1 MGP_WSBEiJ_G0011377.1 mouse_genomes_project 2 73685498 73685762 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052379.1 MGP_WSBEiJ_G0024760.1 mouse_genomes_project 2 24481118 24489159 + MGP_WSBEiJ_P0052379 Fam69b protein_coding protein_coding MGP_WSBEiJ_T0052380.1 MGP_WSBEiJ_G0024760.1 mouse_genomes_project 2 24481155 24485669 + Fam69b protein_coding processed_transcript MGP_WSBEiJ_T0052381.1 MGP_WSBEiJ_G0024760.1 mouse_genomes_project 2 24486864 24487687 + Fam69b protein_coding processed_transcript MGP_WSBEiJ_T0001001.1 MGP_WSBEiJ_G0000936.1 mouse_genomes_project 2 8862013 8864120 - TEC TEC MGP_WSBEiJ_T0013452.1 MGP_WSBEiJ_G0011582.1 mouse_genomes_project 2 155949087 155949395 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056964.1 MGP_WSBEiJ_G0025831.1 mouse_genomes_project 2 147078050 147107962 + MGP_WSBEiJ_P0056964 Dstn protein_coding protein_coding MGP_WSBEiJ_T0055624.1 MGP_WSBEiJ_G0025529.1 mouse_genomes_project 2 113702442 113703381 - MGP_WSBEiJ_P0055624 protein_coding protein_coding MGP_WSBEiJ_T0055635.1 MGP_WSBEiJ_G0025537.1 mouse_genomes_project 2 113972742 113974086 + MGP_WSBEiJ_P0055635 Nop10 protein_coding protein_coding MGP_WSBEiJ_T0007074.1 MGP_WSBEiJ_G0005804.1 mouse_genomes_project 2 32441710 32455783 - Gm38389 lincRNA lincRNA MGP_WSBEiJ_T0011327.1 MGP_WSBEiJ_G0009484.1 mouse_genomes_project 2 179234629 179234754 + Gm27849 misc_RNA misc_RNA MGP_WSBEiJ_T0010319.1 MGP_WSBEiJ_G0008476.1 mouse_genomes_project 2 179204362 179204441 - Mir296 miRNA miRNA MGP_WSBEiJ_T0058599.1 MGP_WSBEiJ_G0026231.1 mouse_genomes_project 2 185163966 185191465 + MGP_WSBEiJ_P0058599 Ss18l1 protein_coding protein_coding MGP_WSBEiJ_T0056372.1 MGP_WSBEiJ_G0025695.1 mouse_genomes_project 2 129032069 129053274 - MGP_WSBEiJ_P0056372 Hdc protein_coding protein_coding MGP_WSBEiJ_T0056373.1 MGP_WSBEiJ_G0025695.1 mouse_genomes_project 2 129032986 129037365 - Hdc protein_coding processed_transcript MGP_WSBEiJ_T0056374.1 MGP_WSBEiJ_G0025695.1 mouse_genomes_project 2 129039341 129053257 - Hdc protein_coding retained_intron MGP_WSBEiJ_T0056375.1 MGP_WSBEiJ_G0025695.1 mouse_genomes_project 2 129043228 129046553 - Hdc protein_coding processed_transcript MGP_WSBEiJ_T0056376.1 MGP_WSBEiJ_G0025695.1 mouse_genomes_project 2 129050765 129053895 - Hdc protein_coding processed_transcript MGP_WSBEiJ_T0007112.1 MGP_WSBEiJ_G0005836.1 mouse_genomes_project 2 67197445 67207697 - Gm26743 lincRNA lincRNA MGP_WSBEiJ_T0053892.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59789384 59866326 - MGP_WSBEiJ_P0053892 Itgb6 protein_coding protein_coding MGP_WSBEiJ_T0053893.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59791327 59918164 - MGP_WSBEiJ_P0053893 Itgb6 protein_coding protein_coding MGP_WSBEiJ_T0053894.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59795340 59918164 - MGP_WSBEiJ_P0053894 Itgb6 protein_coding protein_coding MGP_WSBEiJ_T0053895.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59796234 59866341 - MGP_WSBEiJ_P0053895 Itgb6 protein_coding protein_coding MGP_WSBEiJ_T0053896.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59827277 59866308 - Itgb6 protein_coding processed_transcript MGP_WSBEiJ_T0053897.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59845890 59866369 - Itgb6 protein_coding processed_transcript MGP_WSBEiJ_T0053898.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59861868 59866318 - Itgb6 protein_coding processed_transcript MGP_WSBEiJ_T0053899.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59867256 59899204 - Itgb6 protein_coding processed_transcript MGP_WSBEiJ_T0053900.1 MGP_WSBEiJ_G0025027.1 mouse_genomes_project 2 59887067 59899181 - Itgb6 protein_coding processed_transcript MGP_WSBEiJ_T0011298.1 MGP_WSBEiJ_G0009455.1 mouse_genomes_project 2 43813685 43813762 + Gm27645 misc_RNA misc_RNA MGP_WSBEiJ_T0053245.1 MGP_WSBEiJ_G0024897.1 mouse_genomes_project 2 31528071 31559720 + MGP_WSBEiJ_P0053245 Angptl2 protein_coding protein_coding MGP_WSBEiJ_T0053246.1 MGP_WSBEiJ_G0024897.1 mouse_genomes_project 2 31528075 31556522 + Angptl2 protein_coding retained_intron MGP_WSBEiJ_T0053247.1 MGP_WSBEiJ_G0024897.1 mouse_genomes_project 2 31528100 31542127 + Angptl2 protein_coding retained_intron MGP_WSBEiJ_T0053248.1 MGP_WSBEiJ_G0024897.1 mouse_genomes_project 2 31528119 31554396 + MGP_WSBEiJ_P0053248 Angptl2 protein_coding protein_coding MGP_WSBEiJ_T0056783.1 MGP_WSBEiJ_G0025788.1 mouse_genomes_project 2 134601443 134617851 + MGP_WSBEiJ_P0056783 Prnp protein_coding protein_coding MGP_WSBEiJ_T0053882.1 MGP_WSBEiJ_G0025024.1 mouse_genomes_project 2 59428731 59463808 - MGP_WSBEiJ_P0053882 Cd302 protein_coding protein_coding MGP_WSBEiJ_T0053883.1 MGP_WSBEiJ_G0025024.1 mouse_genomes_project 2 59428731 59463738 - MGP_WSBEiJ_P0053883 Cd302 protein_coding protein_coding MGP_WSBEiJ_T0052542.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26596646 26631091 + MGP_WSBEiJ_P0052542 Tsc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052543.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26596655 26649634 + MGP_WSBEiJ_P0052543 Tsc1 protein_coding protein_coding MGP_WSBEiJ_T0052544.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26596659 26647015 + MGP_WSBEiJ_P0052544 Tsc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052545.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26596659 26649634 + MGP_WSBEiJ_P0052545 Tsc1 protein_coding protein_coding MGP_WSBEiJ_T0052546.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26596661 26649634 + MGP_WSBEiJ_P0052546 Tsc1 protein_coding protein_coding MGP_WSBEiJ_T0052547.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26596668 26632337 + Tsc1 protein_coding retained_intron MGP_WSBEiJ_T0052548.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26596672 26626544 + Tsc1 protein_coding retained_intron MGP_WSBEiJ_T0052549.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26617118 26649634 + MGP_WSBEiJ_P0052549 Tsc1 protein_coding protein_coding MGP_WSBEiJ_T0052550.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26621953 26624550 + Tsc1 protein_coding retained_intron MGP_WSBEiJ_T0052551.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26629599 26631771 + Tsc1 protein_coding retained_intron MGP_WSBEiJ_T0052552.1 MGP_WSBEiJ_G0024795.1 mouse_genomes_project 2 26630862 26631913 + Tsc1 protein_coding retained_intron MGP_WSBEiJ_T0010244.1 MGP_WSBEiJ_G0008401.1 mouse_genomes_project 2 36670290 36670372 - Gm44455 miRNA miRNA MGP_WSBEiJ_T0017277.1 MGP_WSBEiJ_G0014888.1 mouse_genomes_project 2 131583810 131589436 + Gm14027 processed_transcript processed_transcript MGP_WSBEiJ_T0055645.1 MGP_WSBEiJ_G0025540.1 mouse_genomes_project 2 114070116 114076602 - MGP_WSBEiJ_P0055645 Emc4 protein_coding protein_coding MGP_WSBEiJ_T0055646.1 MGP_WSBEiJ_G0025540.1 mouse_genomes_project 2 114071585 114089486 - MGP_WSBEiJ_P0055646 Emc4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055647.1 MGP_WSBEiJ_G0025540.1 mouse_genomes_project 2 114072367 114076595 - Emc4 protein_coding processed_transcript MGP_WSBEiJ_T0007326.1 MGP_WSBEiJ_G0006013.1 mouse_genomes_project 2 186090849 186091965 + Gm27032 lincRNA lincRNA MGP_WSBEiJ_T0057267.1 MGP_WSBEiJ_G0025923.1 mouse_genomes_project 2 156171008 156210129 + MGP_WSBEiJ_P0057267 H13 protein_coding protein_coding MGP_WSBEiJ_T0057268.1 MGP_WSBEiJ_G0025923.1 mouse_genomes_project 2 156171033 156184894 + H13 protein_coding retained_intron MGP_WSBEiJ_T0057269.1 MGP_WSBEiJ_G0025923.1 mouse_genomes_project 2 156171035 156206526 + MGP_WSBEiJ_P0057269 H13 protein_coding protein_coding MGP_WSBEiJ_T0057270.1 MGP_WSBEiJ_G0025923.1 mouse_genomes_project 2 156171035 156188159 + MGP_WSBEiJ_P0057270 H13 protein_coding protein_coding MGP_WSBEiJ_T0057271.1 MGP_WSBEiJ_G0025923.1 mouse_genomes_project 2 156171081 156205618 + MGP_WSBEiJ_P0057271 H13 protein_coding protein_coding MGP_WSBEiJ_T0057273.1 MGP_WSBEiJ_G0025923.1 mouse_genomes_project 2 156193326 156197757 + H13 protein_coding retained_intron MGP_WSBEiJ_T0055442.1 MGP_WSBEiJ_G0025464.1 mouse_genomes_project 2 105395444 105427159 + MGP_WSBEiJ_P0055442 Cd59b protein_coding protein_coding MGP_WSBEiJ_T0052227.1 MGP_WSBEiJ_G0024739.1 mouse_genomes_project 2 23626418 23630672 - MGP_WSBEiJ_P0052227 Sohlh1 protein_coding protein_coding MGP_WSBEiJ_T0013073.1 MGP_WSBEiJ_G0011203.1 mouse_genomes_project 2 6504796 6505226 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054684.1 MGP_WSBEiJ_G0025186.1 mouse_genomes_project 2 85877696 85878641 - MGP_WSBEiJ_P0054684 Olfr993 protein_coding protein_coding MGP_WSBEiJ_T0058579.1 MGP_WSBEiJ_G0026227.1 mouse_genomes_project 2 184537833 185009938 + MGP_WSBEiJ_P0058579 Cdh4 protein_coding protein_coding MGP_WSBEiJ_T0058580.1 MGP_WSBEiJ_G0026227.1 mouse_genomes_project 2 184538024 184958346 + MGP_WSBEiJ_P0058580 Cdh4 protein_coding protein_coding MGP_WSBEiJ_T0058581.1 MGP_WSBEiJ_G0026227.1 mouse_genomes_project 2 184539609 184891521 + Cdh4 protein_coding processed_transcript MGP_WSBEiJ_T0058582.1 MGP_WSBEiJ_G0026227.1 mouse_genomes_project 2 184888775 184910143 + Cdh4 protein_coding processed_transcript MGP_WSBEiJ_T0058583.1 MGP_WSBEiJ_G0026227.1 mouse_genomes_project 2 185004443 185006707 + Cdh4 protein_coding retained_intron MGP_WSBEiJ_T0058584.1 MGP_WSBEiJ_G0026227.1 mouse_genomes_project 2 185004468 185005251 + MGP_WSBEiJ_P0058584 Cdh4 protein_coding protein_coding MGP_WSBEiJ_T0013371.1 MGP_WSBEiJ_G0011501.1 mouse_genomes_project 2 121003592 121003861 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057096.1 MGP_WSBEiJ_G0025860.1 mouse_genomes_project 2 151716273 151717697 + MGP_WSBEiJ_P0057096 Sstr4 protein_coding protein_coding MGP_WSBEiJ_T0001064.1 MGP_WSBEiJ_G0000998.1 mouse_genomes_project 2 131773035 131774082 - TEC TEC MGP_WSBEiJ_T0013116.1 MGP_WSBEiJ_G0011246.1 mouse_genomes_project 2 21167908 21168355 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099393.1 MGP_WSBEiJ_G0038056.1 mouse_genomes_project 2 152911545 152911637 - Gm24551 snoRNA snoRNA MGP_WSBEiJ_T0055093.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92288142 92381749 + MGP_WSBEiJ_P0055093 Ckap5 protein_coding protein_coding MGP_WSBEiJ_T0055094.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92288358 92315652 + Ckap5 protein_coding processed_transcript MGP_WSBEiJ_T0055095.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92306597 92325455 + Ckap5 protein_coding retained_intron MGP_WSBEiJ_T0055096.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92306599 92381747 + MGP_WSBEiJ_P0055096 Ckap5 protein_coding protein_coding MGP_WSBEiJ_T0055097.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92306599 92381747 + MGP_WSBEiJ_P0055097 Ckap5 protein_coding protein_coding MGP_WSBEiJ_T0055098.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92306610 92381748 + MGP_WSBEiJ_P0055098 Ckap5 protein_coding protein_coding MGP_WSBEiJ_T0055099.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92315527 92325458 + Ckap5 protein_coding retained_intron MGP_WSBEiJ_T0055100.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92355182 92367920 + Ckap5 protein_coding processed_transcript MGP_WSBEiJ_T0055101.1 MGP_WSBEiJ_G0025404.1 mouse_genomes_project 2 92356505 92361094 + Ckap5 protein_coding retained_intron MGP_WSBEiJ_T0052183.1 MGP_WSBEiJ_G0024722.1 mouse_genomes_project 2 23341636 23343431 - MGP_WSBEiJ_P0052183 Phpt1 protein_coding protein_coding MGP_WSBEiJ_T0052184.1 MGP_WSBEiJ_G0024722.1 mouse_genomes_project 2 23341708 23343085 - Phpt1 protein_coding processed_transcript MGP_WSBEiJ_T0051818.1 MGP_WSBEiJ_G0024660.1 mouse_genomes_project 2 20531290 20548449 + Pdss1 protein_coding processed_transcript MGP_WSBEiJ_T0051819.1 MGP_WSBEiJ_G0024660.1 mouse_genomes_project 2 20531290 20573290 + MGP_WSBEiJ_P0051819 Pdss1 protein_coding protein_coding MGP_WSBEiJ_T0051820.1 MGP_WSBEiJ_G0024660.1 mouse_genomes_project 2 20531363 20551959 + MGP_WSBEiJ_P0051820 Pdss1 protein_coding protein_coding MGP_WSBEiJ_T0051821.1 MGP_WSBEiJ_G0024660.1 mouse_genomes_project 2 20531387 20537606 + MGP_WSBEiJ_P0051821 Pdss1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051822.1 MGP_WSBEiJ_G0024660.1 mouse_genomes_project 2 20531816 20542574 + MGP_WSBEiJ_P0051822 Pdss1 protein_coding protein_coding MGP_WSBEiJ_T0051823.1 MGP_WSBEiJ_G0024660.1 mouse_genomes_project 2 20567133 20573279 + Pdss1 protein_coding retained_intron MGP_WSBEiJ_T0051824.1 MGP_WSBEiJ_G0024660.1 mouse_genomes_project 2 20568570 20573266 + MGP_WSBEiJ_P0051824 Pdss1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0007273.1 MGP_WSBEiJ_G0005967.1 mouse_genomes_project 2 167214129 167217344 - Gm14254 lincRNA lincRNA MGP_WSBEiJ_T0013277.1 MGP_WSBEiJ_G0011407.1 mouse_genomes_project 2 83831527 83831737 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051516.1 MGP_WSBEiJ_G0024610.1 mouse_genomes_project 2 8917203 8936406 - MGP_WSBEiJ_P0051516 Rbm17 protein_coding protein_coding MGP_WSBEiJ_T0051517.1 MGP_WSBEiJ_G0024610.1 mouse_genomes_project 2 8917205 8917757 - Rbm17 protein_coding retained_intron MGP_WSBEiJ_T0051518.1 MGP_WSBEiJ_G0024610.1 mouse_genomes_project 2 8917207 8918935 - Rbm17 protein_coding retained_intron MGP_WSBEiJ_T0051519.1 MGP_WSBEiJ_G0024610.1 mouse_genomes_project 2 8919157 8921924 - Rbm17 protein_coding retained_intron MGP_WSBEiJ_T0051520.1 MGP_WSBEiJ_G0024610.1 mouse_genomes_project 2 8921857 8923801 - Rbm17 protein_coding retained_intron MGP_WSBEiJ_T0051521.1 MGP_WSBEiJ_G0024610.1 mouse_genomes_project 2 8929831 8937294 - MGP_WSBEiJ_P0051521 Rbm17 protein_coding protein_coding MGP_WSBEiJ_T0013136.1 MGP_WSBEiJ_G0011266.1 mouse_genomes_project 2 30663621 30664303 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097030.1 MGP_WSBEiJ_G0035711.1 mouse_genomes_project 2 120316196 120316290 + Gm22651 rRNA rRNA MGP_WSBEiJ_T0056318.1 MGP_WSBEiJ_G0025680.1 mouse_genomes_project 2 127555546 127636279 + MGP_WSBEiJ_P0056318 Slc12a1 protein_coding protein_coding MGP_WSBEiJ_T0056319.1 MGP_WSBEiJ_G0025680.1 mouse_genomes_project 2 127555621 127570127 + Slc12a1 protein_coding retained_intron MGP_WSBEiJ_T0056320.1 MGP_WSBEiJ_G0025680.1 mouse_genomes_project 2 127555641 127636276 + MGP_WSBEiJ_P0056320 Slc12a1 protein_coding protein_coding MGP_WSBEiJ_T0056321.1 MGP_WSBEiJ_G0025680.1 mouse_genomes_project 2 127555641 127636279 + MGP_WSBEiJ_P0056321 Slc12a1 protein_coding protein_coding MGP_WSBEiJ_T0007263.1 MGP_WSBEiJ_G0005957.1 mouse_genomes_project 2 162220613 162220745 - Gm23925 lincRNA lincRNA MGP_WSBEiJ_T0055215.1 MGP_WSBEiJ_G0025424.1 mouse_genomes_project 2 93774784 93816975 + MGP_WSBEiJ_P0055215 Syt13 protein_coding protein_coding MGP_WSBEiJ_T0052343.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24304100 24350977 - MGP_WSBEiJ_P0052343 Notch1 protein_coding protein_coding MGP_WSBEiJ_T0052344.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24308414 24308944 - Notch1 protein_coding processed_transcript MGP_WSBEiJ_T0052345.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24311664 24313807 - Notch1 protein_coding processed_transcript MGP_WSBEiJ_T0052346.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24311664 24312357 - Notch1 protein_coding processed_transcript MGP_WSBEiJ_T0052347.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24311664 24312848 - Notch1 protein_coding processed_transcript MGP_WSBEiJ_T0052348.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24311664 24312561 - Notch1 protein_coding processed_transcript MGP_WSBEiJ_T0052349.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24311664 24312988 - Notch1 protein_coding processed_transcript MGP_WSBEiJ_T0052350.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24314736 24315943 - Notch1 protein_coding processed_transcript MGP_WSBEiJ_T0052351.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24316018 24316692 - Notch1 protein_coding processed_transcript MGP_WSBEiJ_T0052352.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24317470 24363776 - MGP_WSBEiJ_P0052352 Notch1 protein_coding protein_coding MGP_WSBEiJ_T0052353.1 MGP_WSBEiJ_G0024756.1 mouse_genomes_project 2 24345308 24350979 - Notch1 protein_coding retained_intron MGP_WSBEiJ_T0054469.1 MGP_WSBEiJ_G0025138.1 mouse_genomes_project 2 79093040 79096171 + MGP_WSBEiJ_P0054469 Ube2e3 protein_coding protein_coding MGP_WSBEiJ_T0054470.1 MGP_WSBEiJ_G0025138.1 mouse_genomes_project 2 79093128 79140709 + MGP_WSBEiJ_P0054470 Ube2e3 protein_coding protein_coding MGP_WSBEiJ_T0054471.1 MGP_WSBEiJ_G0025138.1 mouse_genomes_project 2 79094689 79148258 + MGP_WSBEiJ_P0054471 Ube2e3 protein_coding protein_coding MGP_WSBEiJ_T0054472.1 MGP_WSBEiJ_G0025138.1 mouse_genomes_project 2 79094805 79141521 + Ube2e3 protein_coding retained_intron MGP_WSBEiJ_T0054473.1 MGP_WSBEiJ_G0025138.1 mouse_genomes_project 2 79094899 79098323 + Ube2e3 protein_coding retained_intron MGP_WSBEiJ_T0054474.1 MGP_WSBEiJ_G0025138.1 mouse_genomes_project 2 79095243 79147262 + MGP_WSBEiJ_P0054474 Ube2e3 protein_coding protein_coding MGP_WSBEiJ_T0054475.1 MGP_WSBEiJ_G0025138.1 mouse_genomes_project 2 79145357 79147017 + Ube2e3 protein_coding retained_intron MGP_WSBEiJ_T0013110.1 MGP_WSBEiJ_G0011240.1 mouse_genomes_project 2 19111897 19112518 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099385.1 MGP_WSBEiJ_G0038048.1 mouse_genomes_project 2 132890593 132890679 + Gm23187 snoRNA snoRNA MGP_WSBEiJ_T0054738.1 MGP_WSBEiJ_G0025237.1 mouse_genomes_project 2 87140356 87141538 - MGP_WSBEiJ_P0054738 protein_coding protein_coding MGP_WSBEiJ_T0099348.1 MGP_WSBEiJ_G0038011.1 mouse_genomes_project 2 41401884 41402016 + Gm24350 snoRNA snoRNA MGP_WSBEiJ_T0058778.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186567412 186574709 - MGP_WSBEiJ_P0058778 Arfrp1 protein_coding protein_coding MGP_WSBEiJ_T0058779.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186567417 186574732 - MGP_WSBEiJ_P0058779 Arfrp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058780.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186567473 186569730 - Arfrp1 protein_coding retained_intron MGP_WSBEiJ_T0058781.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186568904 186574724 - Arfrp1 protein_coding retained_intron MGP_WSBEiJ_T0058782.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186569017 186574710 - Arfrp1 protein_coding retained_intron MGP_WSBEiJ_T0058783.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186569091 186574192 - Arfrp1 protein_coding retained_intron MGP_WSBEiJ_T0058784.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186569298 186574751 - Arfrp1 protein_coding retained_intron MGP_WSBEiJ_T0058785.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186569304 186574728 - MGP_WSBEiJ_P0058785 Arfrp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058786.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186571037 186574657 - Arfrp1 protein_coding processed_transcript MGP_WSBEiJ_T0058787.1 MGP_WSBEiJ_G0026267.1 mouse_genomes_project 2 186573670 186574741 - Arfrp1 protein_coding retained_intron MGP_WSBEiJ_T0013218.1 MGP_WSBEiJ_G0011348.1 mouse_genomes_project 2 60984336 60985035 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010207.1 MGP_WSBEiJ_G0008364.1 mouse_genomes_project 2 7832125 7832215 + Gm24806 miRNA miRNA MGP_WSBEiJ_T0013152.1 MGP_WSBEiJ_G0011282.1 mouse_genomes_project 2 36953594 36953729 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013168.1 MGP_WSBEiJ_G0011298.1 mouse_genomes_project 2 40674380 40674613 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056112.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123291775 123310379 - Trp53bp1 protein_coding processed_transcript MGP_WSBEiJ_T0056113.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123293333 123370474 - MGP_WSBEiJ_P0056113 Trp53bp1 protein_coding protein_coding MGP_WSBEiJ_T0056114.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123293333 123370408 - MGP_WSBEiJ_P0056114 Trp53bp1 protein_coding protein_coding MGP_WSBEiJ_T0056115.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123296741 123334075 - MGP_WSBEiJ_P0056115 Trp53bp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056116.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123298129 123303398 - Trp53bp1 protein_coding processed_transcript MGP_WSBEiJ_T0056117.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123301117 123306164 - MGP_WSBEiJ_P0056117 Trp53bp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056118.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123303497 123306980 - Trp53bp1 protein_coding processed_transcript MGP_WSBEiJ_T0056119.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123306825 123319603 - MGP_WSBEiJ_P0056119 Trp53bp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056120.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123307250 123319594 - Trp53bp1 protein_coding retained_intron MGP_WSBEiJ_T0056121.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123309705 123316813 - Trp53bp1 protein_coding processed_transcript MGP_WSBEiJ_T0056122.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123314300 123319741 - Trp53bp1 protein_coding retained_intron MGP_WSBEiJ_T0056123.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123314536 123370388 - MGP_WSBEiJ_P0056123 Trp53bp1 protein_coding protein_coding MGP_WSBEiJ_T0056124.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123326493 123333758 - MGP_WSBEiJ_P0056124 Trp53bp1 protein_coding protein_coding MGP_WSBEiJ_T0056125.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123330160 123333890 - Trp53bp1 protein_coding processed_transcript MGP_WSBEiJ_T0056126.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123334892 123349968 - MGP_WSBEiJ_P0056126 Trp53bp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056127.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123354456 123370436 - Trp53bp1 protein_coding processed_transcript MGP_WSBEiJ_T0056128.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123356887 123369353 - Trp53bp1 protein_coding retained_intron MGP_WSBEiJ_T0056129.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123366379 123370428 - Trp53bp1 protein_coding retained_intron MGP_WSBEiJ_T0056130.1 MGP_WSBEiJ_G0025636.1 mouse_genomes_project 2 123368696 123370437 - Trp53bp1 protein_coding retained_intron MGP_WSBEiJ_T0051302.1 MGP_WSBEiJ_G0024576.1 mouse_genomes_project 2 452634 487901 - MGP_WSBEiJ_P0051302 protein_coding protein_coding MGP_WSBEiJ_T0051303.1 MGP_WSBEiJ_G0024576.1 mouse_genomes_project 2 452760 453947 - protein_coding retained_intron MGP_WSBEiJ_T0051304.1 MGP_WSBEiJ_G0024576.1 mouse_genomes_project 2 454742 455824 - protein_coding retained_intron MGP_WSBEiJ_T0051305.1 MGP_WSBEiJ_G0024576.1 mouse_genomes_project 2 460174 463229 - protein_coding retained_intron MGP_WSBEiJ_T0051306.1 MGP_WSBEiJ_G0024576.1 mouse_genomes_project 2 465625 473903 - protein_coding retained_intron MGP_WSBEiJ_T0051307.1 MGP_WSBEiJ_G0024576.1 mouse_genomes_project 2 479407 487844 - MGP_WSBEiJ_P0051307 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051308.1 MGP_WSBEiJ_G0024576.1 mouse_genomes_project 2 481289 487877 - MGP_WSBEiJ_P0051308 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051309.1 MGP_WSBEiJ_G0024576.1 mouse_genomes_project 2 485974 487830 - protein_coding retained_intron MGP_WSBEiJ_T0052857.1 MGP_WSBEiJ_G0024839.1 mouse_genomes_project 2 28951199 28956359 - Asb6 protein_coding retained_intron MGP_WSBEiJ_T0052858.1 MGP_WSBEiJ_G0024839.1 mouse_genomes_project 2 28951199 28958438 - MGP_WSBEiJ_P0052858 Asb6 protein_coding protein_coding MGP_WSBEiJ_T0052859.1 MGP_WSBEiJ_G0024839.1 mouse_genomes_project 2 28952572 28956370 - MGP_WSBEiJ_P0052859 Asb6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052860.1 MGP_WSBEiJ_G0024839.1 mouse_genomes_project 2 28953260 28956396 - Asb6 protein_coding retained_intron MGP_WSBEiJ_T0052861.1 MGP_WSBEiJ_G0024839.1 mouse_genomes_project 2 28953564 28955599 - Asb6 protein_coding retained_intron MGP_WSBEiJ_T0058050.1 MGP_WSBEiJ_G0026093.1 mouse_genomes_project 2 168405734 168407624 + MGP_WSBEiJ_P0058050 protein_coding protein_coding MGP_WSBEiJ_T0013131.1 MGP_WSBEiJ_G0011261.1 mouse_genomes_project 2 27499774 27500065 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051689.1 MGP_WSBEiJ_G0024636.1 mouse_genomes_project 2 15567995 15568458 - MGP_WSBEiJ_P0051689 H2afb1 protein_coding protein_coding MGP_WSBEiJ_T0053258.1 MGP_WSBEiJ_G0024900.1 mouse_genomes_project 2 31890005 31971039 - MGP_WSBEiJ_P0053258 Lmx1b protein_coding protein_coding MGP_WSBEiJ_T0053259.1 MGP_WSBEiJ_G0024900.1 mouse_genomes_project 2 31893380 31970939 - MGP_WSBEiJ_P0053259 Lmx1b protein_coding protein_coding MGP_WSBEiJ_T0053260.1 MGP_WSBEiJ_G0024900.1 mouse_genomes_project 2 31896210 31962769 - Lmx1b protein_coding processed_transcript MGP_WSBEiJ_T0054745.1 MGP_WSBEiJ_G0025244.1 mouse_genomes_project 2 87338705 87339647 - MGP_WSBEiJ_P0054745 Olfr1090 protein_coding protein_coding MGP_WSBEiJ_T0054730.1 MGP_WSBEiJ_G0025230.1 mouse_genomes_project 2 86970896 86983219 - MGP_WSBEiJ_P0054730 Olfr1058 protein_coding protein_coding MGP_WSBEiJ_T0056426.1 MGP_WSBEiJ_G0025704.1 mouse_genomes_project 2 129606024 129610703 - MGP_WSBEiJ_P0056426 Itpripl1 protein_coding protein_coding MGP_WSBEiJ_T0056427.1 MGP_WSBEiJ_G0025704.1 mouse_genomes_project 2 129607669 129610566 - MGP_WSBEiJ_P0056427 Itpripl1 protein_coding protein_coding MGP_WSBEiJ_T0056428.1 MGP_WSBEiJ_G0025704.1 mouse_genomes_project 2 129607789 129609851 - MGP_WSBEiJ_P0056428 Itpripl1 protein_coding protein_coding MGP_WSBEiJ_T0011309.1 MGP_WSBEiJ_G0009466.1 mouse_genomes_project 2 106526086 106526319 - Gm27308 misc_RNA misc_RNA MGP_WSBEiJ_T0056560.1 MGP_WSBEiJ_G0025740.1 mouse_genomes_project 2 131846125 131879785 - MGP_WSBEiJ_P0056560 Ckap2l protein_coding protein_coding MGP_WSBEiJ_T0098094.1 MGP_WSBEiJ_G0036757.1 mouse_genomes_project 2 27958679 27958776 - Gm23865 snRNA snRNA MGP_WSBEiJ_T0010249.1 MGP_WSBEiJ_G0008406.1 mouse_genomes_project 2 43720099 43720177 - Mir5129 miRNA miRNA MGP_WSBEiJ_T0051643.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12077015 12078518 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051644.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12078210 12481775 + MGP_WSBEiJ_P0051644 Cacnb2 protein_coding protein_coding MGP_WSBEiJ_T0051645.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12079026 12456109 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051646.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12221513 12481774 + Cacnb2 protein_coding processed_transcript MGP_WSBEiJ_T0051647.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12250832 12456943 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051648.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12315408 12467358 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051649.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12315474 12480171 + MGP_WSBEiJ_P0051649 Cacnb2 protein_coding protein_coding MGP_WSBEiJ_T0051650.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12367541 12467273 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051651.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12367542 12467358 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051652.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12367555 12480109 + MGP_WSBEiJ_P0051652 Cacnb2 protein_coding protein_coding MGP_WSBEiJ_T0051653.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12367877 12458824 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051654.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12368307 12394552 + MGP_WSBEiJ_P0051654 Cacnb2 protein_coding protein_coding MGP_WSBEiJ_T0051655.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12368634 12460577 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051656.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12368638 12480963 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0051657.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12456027 12474140 + MGP_WSBEiJ_P0051657 Cacnb2 protein_coding protein_coding MGP_WSBEiJ_T0051658.1 MGP_WSBEiJ_G0024630.1 mouse_genomes_project 2 12476101 12478402 + Cacnb2 protein_coding retained_intron MGP_WSBEiJ_T0054038.1 MGP_WSBEiJ_G0025049.1 mouse_genomes_project 2 65927790 66108955 - MGP_WSBEiJ_P0054038 Scn9a protein_coding protein_coding MGP_WSBEiJ_T0054039.1 MGP_WSBEiJ_G0025049.1 mouse_genomes_project 2 65927790 66108955 - MGP_WSBEiJ_P0054039 Scn9a protein_coding protein_coding MGP_WSBEiJ_T0054040.1 MGP_WSBEiJ_G0025049.1 mouse_genomes_project 2 65929836 66108656 - MGP_WSBEiJ_P0054040 Scn9a protein_coding protein_coding MGP_WSBEiJ_T0054041.1 MGP_WSBEiJ_G0025049.1 mouse_genomes_project 2 65929836 66108656 - MGP_WSBEiJ_P0054041 Scn9a protein_coding protein_coding MGP_WSBEiJ_T0054042.1 MGP_WSBEiJ_G0025049.1 mouse_genomes_project 2 65930858 66108656 - MGP_WSBEiJ_P0054042 Scn9a protein_coding protein_coding MGP_WSBEiJ_T0054043.1 MGP_WSBEiJ_G0025049.1 mouse_genomes_project 2 66005602 66008764 - Scn9a protein_coding retained_intron MGP_WSBEiJ_T0054044.1 MGP_WSBEiJ_G0025049.1 mouse_genomes_project 2 66030337 66108965 - Scn9a protein_coding retained_intron MGP_WSBEiJ_T0007125.1 MGP_WSBEiJ_G0005846.1 mouse_genomes_project 2 74021664 74022214 + Gm28640 lincRNA lincRNA MGP_WSBEiJ_T0007141.1 MGP_WSBEiJ_G0005860.1 mouse_genomes_project 2 78266863 78287677 + lincRNA lincRNA MGP_WSBEiJ_T0007142.1 MGP_WSBEiJ_G0005860.1 mouse_genomes_project 2 78266909 78407940 + lincRNA lincRNA MGP_WSBEiJ_T0054128.1 MGP_WSBEiJ_G0025070.1 mouse_genomes_project 2 69455586 69457967 + Klhl23 protein_coding processed_transcript MGP_WSBEiJ_T0054129.1 MGP_WSBEiJ_G0025070.1 mouse_genomes_project 2 69456012 69472362 + MGP_WSBEiJ_P0054129 Klhl23 protein_coding protein_coding MGP_WSBEiJ_T0054130.1 MGP_WSBEiJ_G0025070.1 mouse_genomes_project 2 69457997 69459888 + Klhl23 protein_coding processed_transcript MGP_WSBEiJ_T0057324.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156685784 156732537 + Tm9sf4 protein_coding processed_transcript MGP_WSBEiJ_T0057325.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156685784 156738137 + MGP_WSBEiJ_P0057325 Tm9sf4 protein_coding protein_coding MGP_WSBEiJ_T0057326.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156686022 156714104 + Tm9sf4 protein_coding processed_transcript MGP_WSBEiJ_T0057327.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156686029 156718576 + Tm9sf4 protein_coding retained_intron MGP_WSBEiJ_T0057328.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156715438 156717227 + Tm9sf4 protein_coding retained_intron MGP_WSBEiJ_T0057329.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156715965 156727210 + Tm9sf4 protein_coding processed_transcript MGP_WSBEiJ_T0057330.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156719381 156731577 + Tm9sf4 protein_coding processed_transcript MGP_WSBEiJ_T0057331.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156720570 156725364 + Tm9sf4 protein_coding processed_transcript MGP_WSBEiJ_T0057332.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156726696 156738137 + Tm9sf4 protein_coding retained_intron MGP_WSBEiJ_T0057333.1 MGP_WSBEiJ_G0025937.1 mouse_genomes_project 2 156729805 156738137 + Tm9sf4 protein_coding retained_intron MGP_WSBEiJ_T0010170.1 MGP_WSBEiJ_G0008327.1 mouse_genomes_project 2 7776383 7776504 + Mir669f miRNA miRNA MGP_WSBEiJ_T0013459.1 MGP_WSBEiJ_G0011589.1 mouse_genomes_project 2 158877880 158878509 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013217.1 MGP_WSBEiJ_G0011347.1 mouse_genomes_project 2 60471641 60471932 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010165.1 MGP_WSBEiJ_G0008322.1 mouse_genomes_project 2 6471365 6471442 - Gm23963 miRNA miRNA MGP_WSBEiJ_T0057110.1 MGP_WSBEiJ_G0025867.1 mouse_genomes_project 2 152081275 152084172 - MGP_WSBEiJ_P0057110 Cst11 protein_coding protein_coding MGP_WSBEiJ_T0053530.1 MGP_WSBEiJ_G0024966.1 mouse_genomes_project 2 36976781 37061628 + MGP_WSBEiJ_P0053530 Nek6 protein_coding protein_coding MGP_WSBEiJ_T0053531.1 MGP_WSBEiJ_G0024966.1 mouse_genomes_project 2 36976806 37053277 + MGP_WSBEiJ_P0053531 Nek6 protein_coding protein_coding MGP_WSBEiJ_T0053532.1 MGP_WSBEiJ_G0024966.1 mouse_genomes_project 2 36976952 37051563 + MGP_WSBEiJ_P0053532 Nek6 protein_coding protein_coding MGP_WSBEiJ_T0053533.1 MGP_WSBEiJ_G0024966.1 mouse_genomes_project 2 36979719 37025645 + MGP_WSBEiJ_P0053533 Nek6 protein_coding protein_coding MGP_WSBEiJ_T0053534.1 MGP_WSBEiJ_G0024966.1 mouse_genomes_project 2 36979764 37028725 + MGP_WSBEiJ_P0053534 Nek6 protein_coding protein_coding MGP_WSBEiJ_T0007038.1 MGP_WSBEiJ_G0005778.1 mouse_genomes_project 2 10076480 10087220 + Gm37565 lincRNA lincRNA MGP_WSBEiJ_T0004059.1 MGP_WSBEiJ_G0003594.1 mouse_genomes_project 2 161363771 161364976 - Gm14286 antisense antisense MGP_WSBEiJ_T0007152.1 MGP_WSBEiJ_G0005869.1 mouse_genomes_project 2 92846627 92903131 - lincRNA lincRNA MGP_WSBEiJ_T0010169.1 MGP_WSBEiJ_G0008326.1 mouse_genomes_project 2 7776098 7776192 + Mir466f-1 miRNA miRNA MGP_WSBEiJ_T0057098.1 MGP_WSBEiJ_G0025862.1 mouse_genomes_project 2 151755799 151763221 - MGP_WSBEiJ_P0057098 Cd93 protein_coding protein_coding MGP_WSBEiJ_T0007139.1 MGP_WSBEiJ_G0005858.1 mouse_genomes_project 2 77323967 77325925 + Gm13943 lincRNA lincRNA MGP_WSBEiJ_T0010230.1 MGP_WSBEiJ_G0008387.1 mouse_genomes_project 2 28430086 28430182 + miRNA miRNA MGP_WSBEiJ_T0057217.1 MGP_WSBEiJ_G0025898.1 mouse_genomes_project 2 155467155 155478911 + MGP_WSBEiJ_P0057217 Slc52a3 protein_coding protein_coding MGP_WSBEiJ_T0007302.1 MGP_WSBEiJ_G0005991.1 mouse_genomes_project 2 173957100 173963535 + Gm14250 lincRNA lincRNA MGP_WSBEiJ_T0054030.1 MGP_WSBEiJ_G0025048.1 mouse_genomes_project 2 65714651 65760095 - MGP_WSBEiJ_P0054030 Scn1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054031.1 MGP_WSBEiJ_G0025048.1 mouse_genomes_project 2 65716765 65760288 - MGP_WSBEiJ_P0054031 Scn1a protein_coding protein_coding MGP_WSBEiJ_T0054032.1 MGP_WSBEiJ_G0025048.1 mouse_genomes_project 2 65718393 65886830 - MGP_WSBEiJ_P0054032 Scn1a protein_coding protein_coding MGP_WSBEiJ_T0054033.1 MGP_WSBEiJ_G0025048.1 mouse_genomes_project 2 65718396 65796973 - MGP_WSBEiJ_P0054033 Scn1a protein_coding protein_coding MGP_WSBEiJ_T0054034.1 MGP_WSBEiJ_G0025048.1 mouse_genomes_project 2 65718402 65860053 - MGP_WSBEiJ_P0054034 Scn1a protein_coding protein_coding MGP_WSBEiJ_T0054035.1 MGP_WSBEiJ_G0025048.1 mouse_genomes_project 2 65718405 65796947 - MGP_WSBEiJ_P0054035 Scn1a protein_coding protein_coding MGP_WSBEiJ_T0054036.1 MGP_WSBEiJ_G0025048.1 mouse_genomes_project 2 65769275 65886833 - MGP_WSBEiJ_P0054036 Scn1a protein_coding protein_coding MGP_WSBEiJ_T0054037.1 MGP_WSBEiJ_G0025048.1 mouse_genomes_project 2 65794115 65886807 - Scn1a protein_coding retained_intron MGP_WSBEiJ_T0058636.1 MGP_WSBEiJ_G0026239.1 mouse_genomes_project 2 185422357 185434594 - MGP_WSBEiJ_P0058636 Rbbp8nl protein_coding protein_coding MGP_WSBEiJ_T0058103.1 MGP_WSBEiJ_G0026114.1 mouse_genomes_project 2 168833305 168844233 - MGP_WSBEiJ_P0058103 Wfdc11 protein_coding protein_coding MGP_WSBEiJ_T0058104.1 MGP_WSBEiJ_G0026114.1 mouse_genomes_project 2 168833448 168835954 - MGP_WSBEiJ_P0058104 Wfdc11 protein_coding protein_coding MGP_WSBEiJ_T0052374.1 MGP_WSBEiJ_G0024759.1 mouse_genomes_project 2 24441893 24454249 - Agpat2 protein_coding processed_transcript MGP_WSBEiJ_T0052375.1 MGP_WSBEiJ_G0024759.1 mouse_genomes_project 2 24441893 24454370 - MGP_WSBEiJ_P0052375 Agpat2 protein_coding protein_coding MGP_WSBEiJ_T0052376.1 MGP_WSBEiJ_G0024759.1 mouse_genomes_project 2 24443338 24454455 - Agpat2 protein_coding processed_transcript MGP_WSBEiJ_T0052377.1 MGP_WSBEiJ_G0024759.1 mouse_genomes_project 2 24444956 24453754 - Agpat2 protein_coding processed_transcript MGP_WSBEiJ_T0052378.1 MGP_WSBEiJ_G0024759.1 mouse_genomes_project 2 24445279 24453964 - MGP_WSBEiJ_P0052378 Agpat2 protein_coding protein_coding MGP_WSBEiJ_T0058238.1 MGP_WSBEiJ_G0026144.1 mouse_genomes_project 2 169735963 169749776 + MGP_WSBEiJ_P0058238 Slc2a10 protein_coding protein_coding MGP_WSBEiJ_T0058239.1 MGP_WSBEiJ_G0026144.1 mouse_genomes_project 2 169739045 169744611 + Slc2a10 protein_coding processed_transcript MGP_WSBEiJ_T0051993.1 MGP_WSBEiJ_G0024688.1 mouse_genomes_project 2 22930077 22933998 - MGP_WSBEiJ_P0051993 Tor4a protein_coding protein_coding MGP_WSBEiJ_T0051994.1 MGP_WSBEiJ_G0024688.1 mouse_genomes_project 2 22932168 22933871 - MGP_WSBEiJ_P0051994 Tor4a protein_coding protein_coding MGP_WSBEiJ_T0051995.1 MGP_WSBEiJ_G0024688.1 mouse_genomes_project 2 22932903 22933883 - MGP_WSBEiJ_P0051995 Tor4a protein_coding protein_coding MGP_WSBEiJ_T0055615.1 MGP_WSBEiJ_G0025520.1 mouse_genomes_project 2 113338979 113339918 - MGP_WSBEiJ_P0055615 Olfr1297 protein_coding protein_coding MGP_WSBEiJ_T0057117.1 MGP_WSBEiJ_G0025871.1 mouse_genomes_project 2 152135075 152148388 + MGP_WSBEiJ_P0057117 Cst13 protein_coding protein_coding MGP_WSBEiJ_T0099366.1 MGP_WSBEiJ_G0038029.1 mouse_genomes_project 2 92356487 92356598 + Snord67 snoRNA snoRNA MGP_WSBEiJ_T0054873.1 MGP_WSBEiJ_G0025353.1 mouse_genomes_project 2 90313746 90314799 - MGP_WSBEiJ_P0054873 Olfr1242 protein_coding protein_coding MGP_WSBEiJ_T0054874.1 MGP_WSBEiJ_G0025353.1 mouse_genomes_project 2 90313842 90318777 - MGP_WSBEiJ_P0054874 Olfr1242 protein_coding protein_coding MGP_WSBEiJ_T0054876.1 MGP_WSBEiJ_G0025353.1 mouse_genomes_project 2 90314472 90318267 - Olfr1242 protein_coding processed_transcript MGP_WSBEiJ_T0100738.1 MGP_WSBEiJ_G0039196.1 mouse_genomes_project 2 121299904 121300145 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0058479.1 MGP_WSBEiJ_G0026199.1 mouse_genomes_project 2 177830067 177845733 + Spo11 protein_coding retained_intron MGP_WSBEiJ_T0058480.1 MGP_WSBEiJ_G0026199.1 mouse_genomes_project 2 177832014 177845727 + MGP_WSBEiJ_P0058480 Spo11 protein_coding protein_coding MGP_WSBEiJ_T0058481.1 MGP_WSBEiJ_G0026199.1 mouse_genomes_project 2 177832021 177845729 + MGP_WSBEiJ_P0058481 Spo11 protein_coding protein_coding MGP_WSBEiJ_T0058482.1 MGP_WSBEiJ_G0026199.1 mouse_genomes_project 2 177832021 177845738 + MGP_WSBEiJ_P0058482 Spo11 protein_coding protein_coding MGP_WSBEiJ_T0058483.1 MGP_WSBEiJ_G0026199.1 mouse_genomes_project 2 177838038 177844215 + Spo11 protein_coding processed_transcript MGP_WSBEiJ_T0013092.1 MGP_WSBEiJ_G0011222.1 mouse_genomes_project 2 12985986 12986416 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013316.1 MGP_WSBEiJ_G0011446.1 mouse_genomes_project 2 97943081 97943751 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017181.1 MGP_WSBEiJ_G0014838.1 mouse_genomes_project 2 49170049 49245706 + Gm13483 processed_transcript processed_transcript MGP_WSBEiJ_T0017182.1 MGP_WSBEiJ_G0014838.1 mouse_genomes_project 2 49170103 49321222 + Gm13483 processed_transcript processed_transcript MGP_WSBEiJ_T0052455.1 MGP_WSBEiJ_G0024776.1 mouse_genomes_project 2 24979023 25010301 - MGP_WSBEiJ_P0052455 Fam163b protein_coding protein_coding MGP_WSBEiJ_T0051409.1 MGP_WSBEiJ_G0024593.1 mouse_genomes_project 2 3001226 3057925 - MGP_WSBEiJ_P0051409 Dhtkd1 protein_coding protein_coding MGP_WSBEiJ_T0051410.1 MGP_WSBEiJ_G0024593.1 mouse_genomes_project 2 3003308 3057876 - MGP_WSBEiJ_P0051410 Dhtkd1 protein_coding protein_coding MGP_WSBEiJ_T0051411.1 MGP_WSBEiJ_G0024593.1 mouse_genomes_project 2 3009436 3021293 - Dhtkd1 protein_coding processed_transcript MGP_WSBEiJ_T0056565.1 MGP_WSBEiJ_G0025743.1 mouse_genomes_project 2 132056414 132128322 - MGP_WSBEiJ_P0056565 F830045P16Rik protein_coding protein_coding MGP_WSBEiJ_T0053784.1 MGP_WSBEiJ_G0025009.1 mouse_genomes_project 2 57131592 57178355 + MGP_WSBEiJ_P0053784 Galnt5 protein_coding protein_coding MGP_WSBEiJ_T0053785.1 MGP_WSBEiJ_G0025009.1 mouse_genomes_project 2 57131592 57172402 + MGP_WSBEiJ_P0053785 Galnt5 protein_coding protein_coding MGP_WSBEiJ_T0058434.1 MGP_WSBEiJ_G0026180.1 mouse_genomes_project 2 174154584 174161654 - MGP_WSBEiJ_P0058434 Gm11011 protein_coding protein_coding MGP_WSBEiJ_T0057488.1 MGP_WSBEiJ_G0025982.1 mouse_genomes_project 2 159066857 159074954 + MGP_WSBEiJ_P0057488 Trp53inp2 protein_coding protein_coding MGP_WSBEiJ_T0057489.1 MGP_WSBEiJ_G0025982.1 mouse_genomes_project 2 159067612 159078673 + MGP_WSBEiJ_P0057489 Trp53inp2 protein_coding protein_coding MGP_WSBEiJ_T0057490.1 MGP_WSBEiJ_G0025982.1 mouse_genomes_project 2 159067638 159075578 + MGP_WSBEiJ_P0057490 Trp53inp2 protein_coding protein_coding MGP_WSBEiJ_T0057491.1 MGP_WSBEiJ_G0025982.1 mouse_genomes_project 2 159067658 159074853 + Trp53inp2 protein_coding retained_intron MGP_WSBEiJ_T0057492.1 MGP_WSBEiJ_G0025982.1 mouse_genomes_project 2 159068000 159074865 + MGP_WSBEiJ_P0057492 Trp53inp2 protein_coding protein_coding MGP_WSBEiJ_T0013341.1 MGP_WSBEiJ_G0011471.1 mouse_genomes_project 2 106261799 106262182 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056954.1 MGP_WSBEiJ_G0025827.1 mouse_genomes_project 2 146192172 146201984 + MGP_WSBEiJ_P0056954 Snrpb2 protein_coding protein_coding MGP_WSBEiJ_T0056955.1 MGP_WSBEiJ_G0025827.1 mouse_genomes_project 2 146192194 146194868 + Snrpb2 protein_coding retained_intron MGP_WSBEiJ_T0056956.1 MGP_WSBEiJ_G0025827.1 mouse_genomes_project 2 146192264 146198555 + MGP_WSBEiJ_P0056956 Snrpb2 protein_coding protein_coding MGP_WSBEiJ_T0056957.1 MGP_WSBEiJ_G0025827.1 mouse_genomes_project 2 146193535 146198555 + Snrpb2 protein_coding retained_intron MGP_WSBEiJ_T0056958.1 MGP_WSBEiJ_G0025827.1 mouse_genomes_project 2 146197306 146201984 + Snrpb2 protein_coding retained_intron MGP_WSBEiJ_T0011307.1 MGP_WSBEiJ_G0009464.1 mouse_genomes_project 2 106523061 106523355 - Gm27538 misc_RNA misc_RNA MGP_WSBEiJ_T0013169.1 MGP_WSBEiJ_G0011299.1 mouse_genomes_project 2 43476688 43479375 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053510.1 MGP_WSBEiJ_G0024963.1 mouse_genomes_project 2 36224365 36247187 + MGP_WSBEiJ_P0053510 Crb2 protein_coding protein_coding MGP_WSBEiJ_T0053511.1 MGP_WSBEiJ_G0024963.1 mouse_genomes_project 2 36239280 36241627 + MGP_WSBEiJ_P0053511 Crb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053512.1 MGP_WSBEiJ_G0024963.1 mouse_genomes_project 2 36243258 36244700 + Crb2 protein_coding processed_transcript MGP_WSBEiJ_T0053056.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30603227 30631404 + MGP_WSBEiJ_P0053056 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053057.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615100 30619498 + Ciz1 protein_coding processed_transcript MGP_WSBEiJ_T0053058.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615100 30619619 + MGP_WSBEiJ_P0053058 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053059.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615151 30622213 + MGP_WSBEiJ_P0053059 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053060.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615288 30631404 + MGP_WSBEiJ_P0053060 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053061.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615288 30631410 + MGP_WSBEiJ_P0053061 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053062.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615443 30635399 + Ciz1 protein_coding retained_intron MGP_WSBEiJ_T0053063.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615523 30617942 + Ciz1 protein_coding processed_transcript MGP_WSBEiJ_T0053064.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615644 30622414 + MGP_WSBEiJ_P0053064 Ciz1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053065.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615846 30617078 + Ciz1 protein_coding retained_intron MGP_WSBEiJ_T0053066.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615895 30631410 + MGP_WSBEiJ_P0053066 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053067.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30615900 30631405 + MGP_WSBEiJ_P0053067 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053068.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30617435 30619605 + Ciz1 protein_coding retained_intron MGP_WSBEiJ_T0053069.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30619502 30623384 + MGP_WSBEiJ_P0053069 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053070.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30619562 30624396 + MGP_WSBEiJ_P0053070 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053071.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30622152 30623841 + Ciz1 protein_coding processed_transcript MGP_WSBEiJ_T0053072.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30622999 30628643 + MGP_WSBEiJ_P0053072 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0053073.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30623925 30627661 + Ciz1 protein_coding retained_intron MGP_WSBEiJ_T0053074.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30624407 30628105 + Ciz1 protein_coding retained_intron MGP_WSBEiJ_T0053075.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30627313 30631406 + Ciz1 protein_coding retained_intron MGP_WSBEiJ_T0053076.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30628212 30629495 + Ciz1 protein_coding retained_intron MGP_WSBEiJ_T0053077.1 MGP_WSBEiJ_G0024868.1 mouse_genomes_project 2 30628593 30634655 + MGP_WSBEiJ_P0053077 Ciz1 protein_coding protein_coding MGP_WSBEiJ_T0052573.1 MGP_WSBEiJ_G0024801.1 mouse_genomes_project 2 26894686 27026122 - MGP_WSBEiJ_P0052573 Cfap77 protein_coding unknown_likely_coding MGP_WSBEiJ_T0052574.1 MGP_WSBEiJ_G0024801.1 mouse_genomes_project 2 26894691 27010513 - Cfap77 protein_coding processed_transcript MGP_WSBEiJ_T0052575.1 MGP_WSBEiJ_G0024801.1 mouse_genomes_project 2 26923360 27026180 - MGP_WSBEiJ_P0052575 Cfap77 protein_coding protein_coding MGP_WSBEiJ_T0052576.1 MGP_WSBEiJ_G0024801.1 mouse_genomes_project 2 27023010 27026173 - Cfap77 protein_coding processed_transcript MGP_WSBEiJ_T0000996.1 MGP_WSBEiJ_G0000931.1 mouse_genomes_project 2 8509767 8512438 - TEC TEC MGP_WSBEiJ_T0053299.1 MGP_WSBEiJ_G0024905.1 mouse_genomes_project 2 33154991 33160572 + MGP_WSBEiJ_P0053299 Hspa5 protein_coding protein_coding MGP_WSBEiJ_T0053300.1 MGP_WSBEiJ_G0024905.1 mouse_genomes_project 2 33155116 33159556 + MGP_WSBEiJ_P0053300 Hspa5 protein_coding protein_coding MGP_WSBEiJ_T0053301.1 MGP_WSBEiJ_G0024905.1 mouse_genomes_project 2 33155120 33156330 + MGP_WSBEiJ_P0053301 Hspa5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053302.1 MGP_WSBEiJ_G0024905.1 mouse_genomes_project 2 33155602 33157215 + Hspa5 protein_coding retained_intron MGP_WSBEiJ_T0053303.1 MGP_WSBEiJ_G0024905.1 mouse_genomes_project 2 33156688 33157356 + Hspa5 protein_coding retained_intron MGP_WSBEiJ_T0053304.1 MGP_WSBEiJ_G0024905.1 mouse_genomes_project 2 33157869 33158640 + Hspa5 protein_coding retained_intron MGP_WSBEiJ_T0054309.1 MGP_WSBEiJ_G0025103.1 mouse_genomes_project 2 73435126 73454383 - MGP_WSBEiJ_P0054309 Chrna1 protein_coding protein_coding MGP_WSBEiJ_T0054698.1 MGP_WSBEiJ_G0025199.1 mouse_genomes_project 2 86253070 86253988 + MGP_WSBEiJ_P0054698 Olfr1014 protein_coding protein_coding MGP_WSBEiJ_T0056538.1 MGP_WSBEiJ_G0025735.1 mouse_genomes_project 2 131592751 131635297 - MGP_WSBEiJ_P0056538 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056539.1 MGP_WSBEiJ_G0025735.1 mouse_genomes_project 2 131605720 131615782 - MGP_WSBEiJ_P0056539 protein_coding protein_coding MGP_WSBEiJ_T0057010.1 MGP_WSBEiJ_G0025841.1 mouse_genomes_project 2 147726695 147735277 - MGP_WSBEiJ_P0057010 Rbbp9 protein_coding protein_coding MGP_WSBEiJ_T0057011.1 MGP_WSBEiJ_G0025841.1 mouse_genomes_project 2 147728248 147735198 - Rbbp9 protein_coding processed_transcript MGP_WSBEiJ_T0054706.1 MGP_WSBEiJ_G0025207.1 mouse_genomes_project 2 86410362 86411301 + MGP_WSBEiJ_P0054706 Olfr1025-ps1 protein_coding protein_coding MGP_WSBEiJ_T0054707.1 MGP_WSBEiJ_G0025207.1 mouse_genomes_project 2 86410362 86411283 + MGP_WSBEiJ_P0054707 Olfr1025-ps1 protein_coding protein_coding MGP_WSBEiJ_T0051754.1 MGP_WSBEiJ_G0024650.1 mouse_genomes_project 2 17084306 17177355 - MGP_WSBEiJ_P0051754 4921504E06Rik protein_coding protein_coding MGP_WSBEiJ_T0051755.1 MGP_WSBEiJ_G0024650.1 mouse_genomes_project 2 17117723 17177355 - 4921504E06Rik protein_coding retained_intron MGP_WSBEiJ_T0010202.1 MGP_WSBEiJ_G0008359.1 mouse_genomes_project 2 7829413 7829493 + Mir466g miRNA miRNA MGP_WSBEiJ_T0007091.1 MGP_WSBEiJ_G0005817.1 mouse_genomes_project 2 48653847 48661147 - Gm13480 lincRNA lincRNA MGP_WSBEiJ_T0057374.1 MGP_WSBEiJ_G0025949.1 mouse_genomes_project 2 157475531 157494718 + MGP_WSBEiJ_P0057374 Bpifb2 protein_coding protein_coding MGP_WSBEiJ_T0057375.1 MGP_WSBEiJ_G0025949.1 mouse_genomes_project 2 157475561 157476872 + Bpifb2 protein_coding retained_intron MGP_WSBEiJ_T0003831.1 MGP_WSBEiJ_G0003426.1 mouse_genomes_project 2 17050560 17053442 - Gm13344 antisense antisense MGP_WSBEiJ_T0054820.1 MGP_WSBEiJ_G0025307.1 mouse_genomes_project 2 89109115 89110039 - MGP_WSBEiJ_P0054820 Olfr1179 protein_coding protein_coding MGP_WSBEiJ_T0098130.1 MGP_WSBEiJ_G0036793.1 mouse_genomes_project 2 142559667 142559771 + Gm27385 snRNA snRNA MGP_WSBEiJ_T0054350.1 MGP_WSBEiJ_G0025109.1 mouse_genomes_project 2 74554333 74557621 + MGP_WSBEiJ_P0054350 Hoxd13 protein_coding protein_coding MGP_WSBEiJ_T0097032.1 MGP_WSBEiJ_G0035713.1 mouse_genomes_project 2 122725590 122725715 - n-R5s205 rRNA rRNA MGP_WSBEiJ_T0013499.1 MGP_WSBEiJ_G0011629.1 mouse_genomes_project 2 171997933 171998409 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058746.1 MGP_WSBEiJ_G0026263.1 mouse_genomes_project 2 186430051 186445810 - MGP_WSBEiJ_P0058746 Helz2 protein_coding protein_coding MGP_WSBEiJ_T0058747.1 MGP_WSBEiJ_G0026263.1 mouse_genomes_project 2 186430052 186445808 - MGP_WSBEiJ_P0058747 Helz2 protein_coding protein_coding MGP_WSBEiJ_T0058748.1 MGP_WSBEiJ_G0026263.1 mouse_genomes_project 2 186430055 186445746 - MGP_WSBEiJ_P0058748 Helz2 protein_coding protein_coding MGP_WSBEiJ_T0058749.1 MGP_WSBEiJ_G0026263.1 mouse_genomes_project 2 186430058 186439552 - Helz2 protein_coding retained_intron MGP_WSBEiJ_T0058750.1 MGP_WSBEiJ_G0026263.1 mouse_genomes_project 2 186440954 186445808 - Helz2 protein_coding retained_intron MGP_WSBEiJ_T0052577.1 MGP_WSBEiJ_G0024802.1 mouse_genomes_project 2 27032649 27065019 + Ttf1 protein_coding retained_intron MGP_WSBEiJ_T0052578.1 MGP_WSBEiJ_G0024802.1 mouse_genomes_project 2 27037010 27065059 + MGP_WSBEiJ_P0052578 Ttf1 protein_coding protein_coding MGP_WSBEiJ_T0052579.1 MGP_WSBEiJ_G0024802.1 mouse_genomes_project 2 27048336 27055772 + Ttf1 protein_coding retained_intron MGP_WSBEiJ_T0052580.1 MGP_WSBEiJ_G0024802.1 mouse_genomes_project 2 27057584 27062143 + Ttf1 protein_coding retained_intron MGP_WSBEiJ_T0017143.1 MGP_WSBEiJ_G0014816.1 mouse_genomes_project 2 11978063 12013424 + Gm13266 processed_transcript lincRNA MGP_WSBEiJ_T0017144.1 MGP_WSBEiJ_G0014816.1 mouse_genomes_project 2 11978063 12006403 + Gm13266 processed_transcript retained_intron MGP_WSBEiJ_T0017145.1 MGP_WSBEiJ_G0014816.1 mouse_genomes_project 2 11978071 12006223 + Gm13266 processed_transcript lincRNA MGP_WSBEiJ_T0054772.1 MGP_WSBEiJ_G0025270.1 mouse_genomes_project 2 88090005 88090977 + MGP_WSBEiJ_P0054772 Olfr1123 protein_coding protein_coding MGP_WSBEiJ_T0099387.1 MGP_WSBEiJ_G0038050.1 mouse_genomes_project 2 132896191 132896263 + Snord57 snoRNA snoRNA MGP_WSBEiJ_T0099376.1 MGP_WSBEiJ_G0038039.1 mouse_genomes_project 2 114214022 114214151 + Gm22676 snoRNA snoRNA MGP_WSBEiJ_T0100724.1 MGP_WSBEiJ_G0039182.1 mouse_genomes_project 2 88677887 88678779 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0058181.1 MGP_WSBEiJ_G0026134.1 mouse_genomes_project 2 169202183 169237326 - MGP_WSBEiJ_P0058181 Ncoa5 protein_coding protein_coding MGP_WSBEiJ_T0058182.1 MGP_WSBEiJ_G0026134.1 mouse_genomes_project 2 169202186 169237276 - MGP_WSBEiJ_P0058182 Ncoa5 protein_coding protein_coding MGP_WSBEiJ_T0058183.1 MGP_WSBEiJ_G0026134.1 mouse_genomes_project 2 169202189 169237247 - MGP_WSBEiJ_P0058183 Ncoa5 protein_coding protein_coding MGP_WSBEiJ_T0058184.1 MGP_WSBEiJ_G0026134.1 mouse_genomes_project 2 169204500 169206483 - Ncoa5 protein_coding retained_intron MGP_WSBEiJ_T0058185.1 MGP_WSBEiJ_G0026134.1 mouse_genomes_project 2 169211937 169237262 - Ncoa5 protein_coding retained_intron MGP_WSBEiJ_T0058186.1 MGP_WSBEiJ_G0026134.1 mouse_genomes_project 2 169215688 169237288 - MGP_WSBEiJ_P0058186 Ncoa5 protein_coding protein_coding MGP_WSBEiJ_T0058187.1 MGP_WSBEiJ_G0026134.1 mouse_genomes_project 2 169225356 169225898 - Ncoa5 protein_coding processed_transcript MGP_WSBEiJ_T0058188.1 MGP_WSBEiJ_G0026134.1 mouse_genomes_project 2 169225626 169237246 - Ncoa5 protein_coding retained_intron MGP_WSBEiJ_T0052458.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25058872 25103948 - Sardh protein_coding processed_transcript MGP_WSBEiJ_T0052459.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25058872 25118482 - MGP_WSBEiJ_P0052459 Sardh protein_coding protein_coding MGP_WSBEiJ_T0052460.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25059676 25062740 - Sardh protein_coding retained_intron MGP_WSBEiJ_T0052461.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25059861 25080461 - Sardh protein_coding processed_transcript MGP_WSBEiJ_T0052462.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25067184 25090214 - Sardh protein_coding retained_intron MGP_WSBEiJ_T0052463.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25081567 25086166 - Sardh protein_coding processed_transcript MGP_WSBEiJ_T0052464.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25081603 25096453 - Sardh protein_coding retained_intron MGP_WSBEiJ_T0052465.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25112698 25118064 - MGP_WSBEiJ_P0052465 Sardh protein_coding protein_coding MGP_WSBEiJ_T0052466.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25112716 25119553 - MGP_WSBEiJ_P0052466 Sardh protein_coding protein_coding MGP_WSBEiJ_T0052467.1 MGP_WSBEiJ_G0024778.1 mouse_genomes_project 2 25115515 25118630 - MGP_WSBEiJ_P0052467 Sardh protein_coding protein_coding MGP_WSBEiJ_T0013266.1 MGP_WSBEiJ_G0011396.1 mouse_genomes_project 2 80865727 80866412 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007200.1 MGP_WSBEiJ_G0005905.1 mouse_genomes_project 2 118879140 118884145 - Gm29340 lincRNA lincRNA MGP_WSBEiJ_T0055951.1 MGP_WSBEiJ_G0025612.1 mouse_genomes_project 2 122236883 122263132 - Pla2g4e protein_coding retained_intron MGP_WSBEiJ_T0055952.1 MGP_WSBEiJ_G0025612.1 mouse_genomes_project 2 122236883 122314694 - MGP_WSBEiJ_P0055952 Pla2g4e protein_coding protein_coding MGP_WSBEiJ_T0055953.1 MGP_WSBEiJ_G0025612.1 mouse_genomes_project 2 122242673 122314445 - Pla2g4e protein_coding retained_intron MGP_WSBEiJ_T0055954.1 MGP_WSBEiJ_G0025612.1 mouse_genomes_project 2 122261308 122314471 - Pla2g4e protein_coding processed_transcript MGP_WSBEiJ_T0013448.1 MGP_WSBEiJ_G0011578.1 mouse_genomes_project 2 154373870 154374353 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052272.1 MGP_WSBEiJ_G0024745.1 mouse_genomes_project 2 24049843 24078060 - MGP_WSBEiJ_P0052272 Qsox2 protein_coding protein_coding MGP_WSBEiJ_T0052273.1 MGP_WSBEiJ_G0024745.1 mouse_genomes_project 2 24049845 24078233 - MGP_WSBEiJ_P0052273 Qsox2 protein_coding protein_coding MGP_WSBEiJ_T0057859.1 MGP_WSBEiJ_G0026042.1 mouse_genomes_project 2 162238872 162249282 + MGP_WSBEiJ_P0057859 Snhg11 protein_coding protein_coding MGP_WSBEiJ_T0057860.1 MGP_WSBEiJ_G0026042.1 mouse_genomes_project 2 162238895 162240463 + Snhg11 protein_coding retained_intron MGP_WSBEiJ_T0057861.1 MGP_WSBEiJ_G0026042.1 mouse_genomes_project 2 162238932 162243953 + MGP_WSBEiJ_P0057861 Snhg11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057862.1 MGP_WSBEiJ_G0026042.1 mouse_genomes_project 2 162238959 162243421 + MGP_WSBEiJ_P0057862 Snhg11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003886.1 MGP_WSBEiJ_G0003468.1 mouse_genomes_project 2 34277339 34281533 + 9030204H09Rik antisense antisense MGP_WSBEiJ_T0011291.1 MGP_WSBEiJ_G0009448.1 mouse_genomes_project 2 21506767 21506942 + Gm26323 misc_RNA misc_RNA MGP_WSBEiJ_T0007231.1 MGP_WSBEiJ_G0005931.1 mouse_genomes_project 2 140087964 140088714 + Gm28214 lincRNA lincRNA MGP_WSBEiJ_T0051625.1 MGP_WSBEiJ_G0024625.1 mouse_genomes_project 2 11279656 11491481 - MGP_WSBEiJ_P0051625 Hacd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051626.1 MGP_WSBEiJ_G0024625.1 mouse_genomes_project 2 11459183 11491465 - MGP_WSBEiJ_P0051626 Hacd1 protein_coding protein_coding MGP_WSBEiJ_T0051627.1 MGP_WSBEiJ_G0024625.1 mouse_genomes_project 2 11459183 11491465 - MGP_WSBEiJ_P0051627 Hacd1 protein_coding protein_coding MGP_WSBEiJ_T0051628.1 MGP_WSBEiJ_G0024625.1 mouse_genomes_project 2 11459254 11491580 - MGP_WSBEiJ_P0051628 Hacd1 protein_coding protein_coding MGP_WSBEiJ_T0054774.1 MGP_WSBEiJ_G0025272.1 mouse_genomes_project 2 88133548 88136911 + MGP_WSBEiJ_P0054774 Olfr1126 protein_coding protein_coding MGP_WSBEiJ_T0057993.1 MGP_WSBEiJ_G0026072.1 mouse_genomes_project 2 167572898 167584457 + MGP_WSBEiJ_P0057993 R3hdml protein_coding protein_coding MGP_WSBEiJ_T0054202.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70918754 70972910 + MGP_WSBEiJ_P0054202 Dync1i2 protein_coding protein_coding MGP_WSBEiJ_T0054203.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70918789 70972906 + MGP_WSBEiJ_P0054203 Dync1i2 protein_coding protein_coding MGP_WSBEiJ_T0054204.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70918789 70972915 + MGP_WSBEiJ_P0054204 Dync1i2 protein_coding protein_coding MGP_WSBEiJ_T0054205.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70918806 70972903 + MGP_WSBEiJ_P0054205 Dync1i2 protein_coding protein_coding MGP_WSBEiJ_T0054206.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70918854 70955833 + Dync1i2 protein_coding processed_transcript MGP_WSBEiJ_T0054207.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70918882 70972915 + MGP_WSBEiJ_P0054207 Dync1i2 protein_coding protein_coding MGP_WSBEiJ_T0054208.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70919020 70972909 + MGP_WSBEiJ_P0054208 Dync1i2 protein_coding protein_coding MGP_WSBEiJ_T0054209.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70919032 70972471 + MGP_WSBEiJ_P0054209 Dync1i2 protein_coding protein_coding MGP_WSBEiJ_T0054210.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70919040 70972915 + MGP_WSBEiJ_P0054210 Dync1i2 protein_coding protein_coding MGP_WSBEiJ_T0054211.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70919052 70938961 + Dync1i2 protein_coding retained_intron MGP_WSBEiJ_T0054212.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70943082 70969080 + Dync1i2 protein_coding retained_intron MGP_WSBEiJ_T0054213.1 MGP_WSBEiJ_G0025084.1 mouse_genomes_project 2 70970158 70972670 + Dync1i2 protein_coding retained_intron MGP_WSBEiJ_T0053970.1 MGP_WSBEiJ_G0025039.1 mouse_genomes_project 2 63315463 63447608 - MGP_WSBEiJ_P0053970 Fign protein_coding protein_coding MGP_WSBEiJ_T0053971.1 MGP_WSBEiJ_G0025039.1 mouse_genomes_project 2 63321207 63447634 - MGP_WSBEiJ_P0053971 Fign protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053972.1 MGP_WSBEiJ_G0025039.1 mouse_genomes_project 2 63324791 63447584 - Fign protein_coding processed_transcript MGP_WSBEiJ_T0053973.1 MGP_WSBEiJ_G0025039.1 mouse_genomes_project 2 63324960 63447606 - Fign protein_coding processed_transcript MGP_WSBEiJ_T0099365.1 MGP_WSBEiJ_G0038028.1 mouse_genomes_project 2 85886184 85886328 + Gm23716 snoRNA snoRNA MGP_WSBEiJ_T0056317.1 MGP_WSBEiJ_G0025679.1 mouse_genomes_project 2 127539304 127550941 + MGP_WSBEiJ_P0056317 Ctxn2 protein_coding protein_coding MGP_WSBEiJ_T0057000.1 MGP_WSBEiJ_G0025839.1 mouse_genomes_project 2 147652359 147711851 - MGP_WSBEiJ_P0057000 Dzank1 protein_coding protein_coding MGP_WSBEiJ_T0057001.1 MGP_WSBEiJ_G0025839.1 mouse_genomes_project 2 147652359 147711867 - MGP_WSBEiJ_P0057001 Dzank1 protein_coding protein_coding MGP_WSBEiJ_T0057002.1 MGP_WSBEiJ_G0025839.1 mouse_genomes_project 2 147692340 147711817 - Dzank1 protein_coding retained_intron MGP_WSBEiJ_T0057003.1 MGP_WSBEiJ_G0025839.1 mouse_genomes_project 2 147706913 147711101 - Dzank1 protein_coding processed_transcript MGP_WSBEiJ_T0054828.1 MGP_WSBEiJ_G0025314.1 mouse_genomes_project 2 89321939 89322860 + MGP_WSBEiJ_P0054828 Olfr1189 protein_coding protein_coding MGP_WSBEiJ_T0057443.1 MGP_WSBEiJ_G0025972.1 mouse_genomes_project 2 158319593 158364509 + Chmp4b protein_coding processed_transcript MGP_WSBEiJ_T0057444.1 MGP_WSBEiJ_G0025972.1 mouse_genomes_project 2 158324541 158364514 + MGP_WSBEiJ_P0057444 Chmp4b protein_coding protein_coding MGP_WSBEiJ_T0057445.1 MGP_WSBEiJ_G0025972.1 mouse_genomes_project 2 158359641 158364010 + Chmp4b protein_coding retained_intron MGP_WSBEiJ_T0017159.1 MGP_WSBEiJ_G0014824.1 mouse_genomes_project 2 24303309 24304514 + Gm13568 processed_transcript processed_transcript MGP_WSBEiJ_T0051422.1 MGP_WSBEiJ_G0024597.1 mouse_genomes_project 2 3458762 3587471 + MGP_WSBEiJ_P0051422 Usp6nl protein_coding protein_coding MGP_WSBEiJ_T0051423.1 MGP_WSBEiJ_G0024597.1 mouse_genomes_project 2 3458867 3562188 + Usp6nl protein_coding processed_transcript MGP_WSBEiJ_T0051424.1 MGP_WSBEiJ_G0024597.1 mouse_genomes_project 2 3488524 3584608 + MGP_WSBEiJ_P0051424 Usp6nl protein_coding protein_coding MGP_WSBEiJ_T0051425.1 MGP_WSBEiJ_G0024597.1 mouse_genomes_project 2 3562097 3565935 + Usp6nl protein_coding processed_transcript MGP_WSBEiJ_T0057879.1 MGP_WSBEiJ_G0026046.1 mouse_genomes_project 2 162481683 162487854 + MGP_WSBEiJ_P0057879 Slc32a1 protein_coding protein_coding MGP_WSBEiJ_T0056580.1 MGP_WSBEiJ_G0025745.1 mouse_genomes_project 2 132278397 132291743 - MGP_WSBEiJ_P0056580 Pdyn protein_coding protein_coding MGP_WSBEiJ_T0056581.1 MGP_WSBEiJ_G0025745.1 mouse_genomes_project 2 132280358 132290568 - MGP_WSBEiJ_P0056581 Pdyn protein_coding protein_coding MGP_WSBEiJ_T0056582.1 MGP_WSBEiJ_G0025745.1 mouse_genomes_project 2 132289895 132291754 - Pdyn protein_coding retained_intron MGP_WSBEiJ_T0055870.1 MGP_WSBEiJ_G0025597.1 mouse_genomes_project 2 121642983 121651880 - Oip5 protein_coding retained_intron MGP_WSBEiJ_T0055871.1 MGP_WSBEiJ_G0025597.1 mouse_genomes_project 2 121643422 121651880 - MGP_WSBEiJ_P0055871 Oip5 protein_coding protein_coding MGP_WSBEiJ_T0013511.1 MGP_WSBEiJ_G0011641.1 mouse_genomes_project 2 186957507 186958409 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056220.1 MGP_WSBEiJ_G0025653.1 mouse_genomes_project 2 124141654 124143141 - MGP_WSBEiJ_P0056220 protein_coding protein_coding MGP_WSBEiJ_T0013498.1 MGP_WSBEiJ_G0011628.1 mouse_genomes_project 2 171935247 171935524 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052419.1 MGP_WSBEiJ_G0024768.1 mouse_genomes_project 2 24787204 24804659 - MGP_WSBEiJ_P0052419 Surf4 protein_coding protein_coding MGP_WSBEiJ_T0052420.1 MGP_WSBEiJ_G0024768.1 mouse_genomes_project 2 24789126 24802396 - MGP_WSBEiJ_P0052420 Surf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052421.1 MGP_WSBEiJ_G0024768.1 mouse_genomes_project 2 24792134 24804512 - MGP_WSBEiJ_P0052421 Surf4 protein_coding protein_coding MGP_WSBEiJ_T0098108.1 MGP_WSBEiJ_G0036771.1 mouse_genomes_project 2 79611402 79611505 + Gm22606 snRNA snRNA MGP_WSBEiJ_T0051910.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22500099 22611140 - MGP_WSBEiJ_P0051910 Ehmt1 protein_coding protein_coding MGP_WSBEiJ_T0051911.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22500443 22639414 - MGP_WSBEiJ_P0051911 Ehmt1 protein_coding protein_coding MGP_WSBEiJ_T0051912.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22500443 22515627 - MGP_WSBEiJ_P0051912 Ehmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051913.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22500443 22639414 - MGP_WSBEiJ_P0051913 Ehmt1 protein_coding protein_coding MGP_WSBEiJ_T0051914.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22501250 22639456 - MGP_WSBEiJ_P0051914 Ehmt1 protein_coding protein_coding MGP_WSBEiJ_T0051915.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22514504 22537739 - Ehmt1 protein_coding retained_intron MGP_WSBEiJ_T0051916.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22515541 22551798 - MGP_WSBEiJ_P0051916 Ehmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051917.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22515599 22516553 - Ehmt1 protein_coding processed_transcript MGP_WSBEiJ_T0051918.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22535210 22639430 - MGP_WSBEiJ_P0051918 Ehmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051919.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22537319 22565746 - MGP_WSBEiJ_P0051919 Ehmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051920.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22547310 22639419 - Ehmt1 protein_coding retained_intron MGP_WSBEiJ_T0051921.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22560243 22592094 - MGP_WSBEiJ_P0051921 Ehmt1 protein_coding protein_coding MGP_WSBEiJ_T0051922.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22578289 22601966 - MGP_WSBEiJ_P0051922 Ehmt1 protein_coding protein_coding MGP_WSBEiJ_T0051923.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22578358 22639447 - MGP_WSBEiJ_P0051923 Ehmt1 protein_coding protein_coding MGP_WSBEiJ_T0051924.1 MGP_WSBEiJ_G0024678.1 mouse_genomes_project 2 22578955 22639438 - MGP_WSBEiJ_P0051924 Ehmt1 protein_coding protein_coding MGP_WSBEiJ_T0097313.1 MGP_WSBEiJ_G0035988.1 mouse_genomes_project 2 1314953 1317361 + Gm36988 sense_intronic sense_intronic MGP_WSBEiJ_T0058354.1 MGP_WSBEiJ_G0026162.1 mouse_genomes_project 2 171878035 171892893 - MGP_WSBEiJ_P0058354 Spata2 protein_coding protein_coding MGP_WSBEiJ_T0058355.1 MGP_WSBEiJ_G0026162.1 mouse_genomes_project 2 171882892 171892851 - MGP_WSBEiJ_P0058355 Spata2 protein_coding protein_coding MGP_WSBEiJ_T0058356.1 MGP_WSBEiJ_G0026162.1 mouse_genomes_project 2 171884555 171885866 - Spata2 protein_coding retained_intron MGP_WSBEiJ_T0058357.1 MGP_WSBEiJ_G0026162.1 mouse_genomes_project 2 171885390 171892878 - Spata2 protein_coding processed_transcript MGP_WSBEiJ_T0058358.1 MGP_WSBEiJ_G0026162.1 mouse_genomes_project 2 171885441 171892851 - Spata2 protein_coding processed_transcript MGP_WSBEiJ_T0058359.1 MGP_WSBEiJ_G0026162.1 mouse_genomes_project 2 171885548 171892884 - Spata2 protein_coding processed_transcript MGP_WSBEiJ_T0058025.1 MGP_WSBEiJ_G0026082.1 mouse_genomes_project 2 168123457 168151539 + MGP_WSBEiJ_P0058025 Pabpc1l protein_coding protein_coding MGP_WSBEiJ_T0058026.1 MGP_WSBEiJ_G0026082.1 mouse_genomes_project 2 168129038 168140919 + Pabpc1l protein_coding processed_transcript MGP_WSBEiJ_T0058027.1 MGP_WSBEiJ_G0026082.1 mouse_genomes_project 2 168135617 168141146 + Pabpc1l protein_coding processed_transcript MGP_WSBEiJ_T0058028.1 MGP_WSBEiJ_G0026082.1 mouse_genomes_project 2 168147634 168151539 + Pabpc1l protein_coding processed_transcript MGP_WSBEiJ_T0058029.1 MGP_WSBEiJ_G0026082.1 mouse_genomes_project 2 168148094 168151152 + Pabpc1l protein_coding processed_transcript MGP_WSBEiJ_T0057026.1 MGP_WSBEiJ_G0025845.1 mouse_genomes_project 2 148017522 148018282 + MGP_WSBEiJ_P0057026 Scp2d1 protein_coding protein_coding MGP_WSBEiJ_T0007070.1 MGP_WSBEiJ_G0005801.1 mouse_genomes_project 2 32277606 32283932 - Gm13403 lincRNA lincRNA MGP_WSBEiJ_T0007071.1 MGP_WSBEiJ_G0005801.1 mouse_genomes_project 2 32279713 32283964 - Gm13403 lincRNA lincRNA MGP_WSBEiJ_T0007321.1 MGP_WSBEiJ_G0006008.1 mouse_genomes_project 2 185520592 185535811 - B230312C02Rik lincRNA lincRNA MGP_WSBEiJ_T0013144.1 MGP_WSBEiJ_G0011274.1 mouse_genomes_project 2 35205855 35206428 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054701.1 MGP_WSBEiJ_G0025202.1 mouse_genomes_project 2 86306801 86307737 + MGP_WSBEiJ_P0054701 Olfr1018 protein_coding protein_coding MGP_WSBEiJ_T0054811.1 MGP_WSBEiJ_G0025299.1 mouse_genomes_project 2 88704714 88705680 + MGP_WSBEiJ_P0054811 Olfr1161 protein_coding protein_coding MGP_WSBEiJ_T0010279.1 MGP_WSBEiJ_G0008436.1 mouse_genomes_project 2 115897455 115897510 - Mir7002 miRNA miRNA MGP_WSBEiJ_T0051694.1 MGP_WSBEiJ_G0024639.1 mouse_genomes_project 2 15615214 15619107 - Skida1 protein_coding processed_transcript MGP_WSBEiJ_T0051695.1 MGP_WSBEiJ_G0024639.1 mouse_genomes_project 2 15618617 15623574 - MGP_WSBEiJ_P0051695 Skida1 protein_coding protein_coding MGP_WSBEiJ_T0051696.1 MGP_WSBEiJ_G0024639.1 mouse_genomes_project 2 15619787 15622969 - MGP_WSBEiJ_P0051696 Skida1 protein_coding protein_coding MGP_WSBEiJ_T0051697.1 MGP_WSBEiJ_G0024639.1 mouse_genomes_project 2 15622235 15623307 - MGP_WSBEiJ_P0051697 Skida1 protein_coding protein_coding MGP_WSBEiJ_T0051698.1 MGP_WSBEiJ_G0024639.1 mouse_genomes_project 2 15622663 15623554 - MGP_WSBEiJ_P0051698 Skida1 protein_coding protein_coding MGP_WSBEiJ_T0100729.1 MGP_WSBEiJ_G0039187.1 mouse_genomes_project 2 89407721 89408657 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0056238.1 MGP_WSBEiJ_G0025660.1 mouse_genomes_project 2 124367525 124388995 + MGP_WSBEiJ_P0056238 Trim69 protein_coding protein_coding MGP_WSBEiJ_T0056239.1 MGP_WSBEiJ_G0025660.1 mouse_genomes_project 2 124367627 124388992 + Trim69 protein_coding processed_transcript MGP_WSBEiJ_T0058435.1 MGP_WSBEiJ_G0026181.1 mouse_genomes_project 2 174211135 174506900 + MGP_WSBEiJ_P0058435 Tshz2 protein_coding protein_coding MGP_WSBEiJ_T0058436.1 MGP_WSBEiJ_G0026181.1 mouse_genomes_project 2 174211792 174479702 + MGP_WSBEiJ_P0058436 Tshz2 protein_coding protein_coding MGP_WSBEiJ_T0058437.1 MGP_WSBEiJ_G0026181.1 mouse_genomes_project 2 174476090 174674633 + MGP_WSBEiJ_P0058437 Tshz2 protein_coding protein_coding MGP_WSBEiJ_T0058438.1 MGP_WSBEiJ_G0026181.1 mouse_genomes_project 2 174476090 174674633 + MGP_WSBEiJ_P0058438 Tshz2 protein_coding protein_coding MGP_WSBEiJ_T0058439.1 MGP_WSBEiJ_G0026181.1 mouse_genomes_project 2 174477032 174506900 + MGP_WSBEiJ_P0058439 Tshz2 protein_coding protein_coding MGP_WSBEiJ_T0056526.1 MGP_WSBEiJ_G0025730.1 mouse_genomes_project 2 131371266 131408781 + MGP_WSBEiJ_P0056526 Tmem87b protein_coding protein_coding MGP_WSBEiJ_T0056527.1 MGP_WSBEiJ_G0025730.1 mouse_genomes_project 2 131371487 131405863 + MGP_WSBEiJ_P0056527 Tmem87b protein_coding unknown_likely_coding MGP_WSBEiJ_T0056528.1 MGP_WSBEiJ_G0025730.1 mouse_genomes_project 2 131371532 131406312 + MGP_WSBEiJ_P0056528 Tmem87b protein_coding protein_coding MGP_WSBEiJ_T0056529.1 MGP_WSBEiJ_G0025730.1 mouse_genomes_project 2 131384710 131404836 + Tmem87b protein_coding processed_transcript MGP_WSBEiJ_T0056530.1 MGP_WSBEiJ_G0025730.1 mouse_genomes_project 2 131394241 131404245 + Tmem87b protein_coding retained_intron MGP_WSBEiJ_T0056531.1 MGP_WSBEiJ_G0025730.1 mouse_genomes_project 2 131404479 131405931 + Tmem87b protein_coding processed_transcript MGP_WSBEiJ_T0057317.1 MGP_WSBEiJ_G0025934.1 mouse_genomes_project 2 156556618 156580568 + MGP_WSBEiJ_P0057317 Xkr7 protein_coding protein_coding MGP_WSBEiJ_T0058196.1 MGP_WSBEiJ_G0026136.1 mouse_genomes_project 2 169291944 169304164 - MGP_WSBEiJ_P0058196 1700025C18Rik protein_coding protein_coding MGP_WSBEiJ_T0057557.1 MGP_WSBEiJ_G0025995.1 mouse_genomes_project 2 159537802 159545112 - MGP_WSBEiJ_P0057557 Fam83c protein_coding protein_coding MGP_WSBEiJ_T0054949.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91541659 91563340 + MGP_WSBEiJ_P0054949 Mtch2 protein_coding protein_coding MGP_WSBEiJ_T0054950.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91541682 91561918 + MGP_WSBEiJ_P0054950 Mtch2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054951.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91541694 91542819 + Mtch2 protein_coding processed_transcript MGP_WSBEiJ_T0054952.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91541735 91563170 + MGP_WSBEiJ_P0054952 Mtch2 protein_coding protein_coding MGP_WSBEiJ_T0054953.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91541757 91546333 + Mtch2 protein_coding retained_intron MGP_WSBEiJ_T0054954.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91541777 91563170 + MGP_WSBEiJ_P0054954 Mtch2 protein_coding protein_coding MGP_WSBEiJ_T0054955.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91541791 91561921 + Mtch2 protein_coding processed_transcript MGP_WSBEiJ_T0054956.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91541803 91560889 + MGP_WSBEiJ_P0054956 Mtch2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0054957.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91546903 91550460 + Mtch2 protein_coding retained_intron MGP_WSBEiJ_T0054958.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91547538 91551577 + Mtch2 protein_coding retained_intron MGP_WSBEiJ_T0054959.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91556858 91562001 + Mtch2 protein_coding retained_intron MGP_WSBEiJ_T0054960.1 MGP_WSBEiJ_G0025386.1 mouse_genomes_project 2 91559077 91561918 + Mtch2 protein_coding retained_intron MGP_WSBEiJ_T0055765.1 MGP_WSBEiJ_G0025569.1 mouse_genomes_project 2 120639959 120674572 + MGP_WSBEiJ_P0055765 Pak6 protein_coding protein_coding MGP_WSBEiJ_T0055766.1 MGP_WSBEiJ_G0025569.1 mouse_genomes_project 2 120640418 120641610 + Pak6 protein_coding retained_intron MGP_WSBEiJ_T0055767.1 MGP_WSBEiJ_G0025569.1 mouse_genomes_project 2 120640720 120654296 + Pak6 protein_coding processed_transcript MGP_WSBEiJ_T0055768.1 MGP_WSBEiJ_G0025569.1 mouse_genomes_project 2 120653754 120674570 + MGP_WSBEiJ_P0055768 Pak6 protein_coding protein_coding MGP_WSBEiJ_T0055769.1 MGP_WSBEiJ_G0025569.1 mouse_genomes_project 2 120653788 120673770 + Pak6 protein_coding retained_intron MGP_WSBEiJ_T0010164.1 MGP_WSBEiJ_G0008321.1 mouse_genomes_project 2 2676639 2676719 + Gm27506 miRNA miRNA MGP_WSBEiJ_T0017227.1 MGP_WSBEiJ_G0014869.1 mouse_genomes_project 2 95327538 95333071 + 2810002D19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0007172.1 MGP_WSBEiJ_G0005883.1 mouse_genomes_project 2 104489738 104493887 - Gm13869 lincRNA lincRNA MGP_WSBEiJ_T0003989.1 MGP_WSBEiJ_G0003541.1 mouse_genomes_project 2 124049170 124050108 - Gm14019 antisense antisense MGP_WSBEiJ_T0017202.1 MGP_WSBEiJ_G0014854.1 mouse_genomes_project 2 84116542 84141385 - Gm13684 processed_transcript processed_transcript MGP_WSBEiJ_T0100695.1 MGP_WSBEiJ_G0039153.1 mouse_genomes_project 2 37896822 37902309 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099333.1 MGP_WSBEiJ_G0037996.1 mouse_genomes_project 2 24490504 24490643 - Snhg7 snoRNA snoRNA MGP_WSBEiJ_T0007202.1 MGP_WSBEiJ_G0005907.1 mouse_genomes_project 2 119746099 119752860 - Gm13985 lincRNA lincRNA MGP_WSBEiJ_T0058460.1 MGP_WSBEiJ_G0026191.1 mouse_genomes_project 2 177150050 177166053 - MGP_WSBEiJ_P0058460 Aurka protein_coding unknown_likely_coding MGP_WSBEiJ_T0058461.1 MGP_WSBEiJ_G0026191.1 mouse_genomes_project 2 177150821 177158315 - Aurka protein_coding retained_intron MGP_WSBEiJ_T0058462.1 MGP_WSBEiJ_G0026191.1 mouse_genomes_project 2 177161733 177165706 - Aurka protein_coding retained_intron MGP_WSBEiJ_T0007189.1 MGP_WSBEiJ_G0005899.1 mouse_genomes_project 2 117151519 117166624 - 4930528P14Rik lincRNA lincRNA MGP_WSBEiJ_T0051495.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8801304 8885259 - MGP_WSBEiJ_P0051495 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051496.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8801662 8831917 - MGP_WSBEiJ_P0051496 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051497.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8801695 8831917 - MGP_WSBEiJ_P0051497 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051498.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8801697 8885104 - MGP_WSBEiJ_P0051498 Pfkfb3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051499.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8801697 8831917 - MGP_WSBEiJ_P0051499 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051500.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8801699 8828214 - Pfkfb3 protein_coding processed_transcript MGP_WSBEiJ_T0051501.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8804282 8831917 - MGP_WSBEiJ_P0051501 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051502.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8804282 8831516 - MGP_WSBEiJ_P0051502 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051503.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8804282 8831917 - MGP_WSBEiJ_P0051503 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051504.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8804282 8831917 - MGP_WSBEiJ_P0051504 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051505.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8805639 8831906 - MGP_WSBEiJ_P0051505 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051506.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8805639 8831906 - MGP_WSBEiJ_P0051506 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051507.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8807828 8831917 - MGP_WSBEiJ_P0051507 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051508.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8807840 8831917 - MGP_WSBEiJ_P0051508 Pfkfb3 protein_coding protein_coding MGP_WSBEiJ_T0051509.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8809733 8831891 - Pfkfb3 protein_coding retained_intron MGP_WSBEiJ_T0051510.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8810847 8811953 - Pfkfb3 protein_coding retained_intron MGP_WSBEiJ_T0051511.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8820149 8831833 - Pfkfb3 protein_coding processed_transcript MGP_WSBEiJ_T0051512.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8822151 8831613 - Pfkfb3 protein_coding retained_intron MGP_WSBEiJ_T0051513.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8822465 8828180 - Pfkfb3 protein_coding processed_transcript MGP_WSBEiJ_T0051514.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8822492 8831117 - Pfkfb3 protein_coding retained_intron MGP_WSBEiJ_T0051515.1 MGP_WSBEiJ_G0024609.1 mouse_genomes_project 2 8823762 8830692 - Pfkfb3 protein_coding processed_transcript MGP_WSBEiJ_T0010205.1 MGP_WSBEiJ_G0008362.1 mouse_genomes_project 2 7830898 7831019 + Mir466l miRNA miRNA MGP_WSBEiJ_T0010306.1 MGP_WSBEiJ_G0008463.1 mouse_genomes_project 2 162625181 162625307 + Gm26141 miRNA miRNA MGP_WSBEiJ_T0053086.1 MGP_WSBEiJ_G0024871.1 mouse_genomes_project 2 30651973 30663339 + MGP_WSBEiJ_P0053086 Ptges2 protein_coding protein_coding MGP_WSBEiJ_T0053087.1 MGP_WSBEiJ_G0024871.1 mouse_genomes_project 2 30652517 30658594 + MGP_WSBEiJ_P0053087 Ptges2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053088.1 MGP_WSBEiJ_G0024871.1 mouse_genomes_project 2 30653547 30659147 + Ptges2 protein_coding retained_intron MGP_WSBEiJ_T0013176.1 MGP_WSBEiJ_G0011306.1 mouse_genomes_project 2 47179074 47179388 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053454.1 MGP_WSBEiJ_G0024939.1 mouse_genomes_project 2 35250076 35251018 - MGP_WSBEiJ_P0053454 Olfr3 protein_coding protein_coding MGP_WSBEiJ_T0053467.1 MGP_WSBEiJ_G0024951.1 mouse_genomes_project 2 35545881 35546835 - MGP_WSBEiJ_P0053467 Olfr362 protein_coding protein_coding MGP_WSBEiJ_T0052897.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29184495 29310236 - MGP_WSBEiJ_P0052897 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052898.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29184496 29258097 - MGP_WSBEiJ_P0052898 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052899.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29184496 29310442 - MGP_WSBEiJ_P0052899 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052900.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29184497 29310430 - MGP_WSBEiJ_P0052900 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052901.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29185084 29310391 - MGP_WSBEiJ_P0052901 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052902.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29186484 29258097 - Fnbp1 protein_coding processed_transcript MGP_WSBEiJ_T0052903.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29192285 29269547 - MGP_WSBEiJ_P0052903 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052904.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29192590 29310236 - MGP_WSBEiJ_P0052904 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052905.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29192601 29310236 - MGP_WSBEiJ_P0052905 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052906.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29192601 29310236 - MGP_WSBEiJ_P0052906 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052907.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29192601 29310236 - MGP_WSBEiJ_P0052907 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052908.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29192682 29215637 - MGP_WSBEiJ_P0052908 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052909.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29213473 29310373 - MGP_WSBEiJ_P0052909 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052910.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29215759 29310389 - MGP_WSBEiJ_P0052910 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052911.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29219136 29280535 - MGP_WSBEiJ_P0052911 Fnbp1 protein_coding protein_coding MGP_WSBEiJ_T0052912.1 MGP_WSBEiJ_G0024846.1 mouse_genomes_project 2 29257687 29269645 - Fnbp1 protein_coding processed_transcript MGP_WSBEiJ_T0057211.1 MGP_WSBEiJ_G0025895.1 mouse_genomes_project 2 155309237 155341765 + MGP_WSBEiJ_P0057211 Rspo4 protein_coding protein_coding MGP_WSBEiJ_T0010255.1 MGP_WSBEiJ_G0008412.1 mouse_genomes_project 2 67305931 67306029 + Mir6335 miRNA miRNA MGP_WSBEiJ_T0013207.1 MGP_WSBEiJ_G0011337.1 mouse_genomes_project 2 58037838 58038167 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054384.1 MGP_WSBEiJ_G0025124.1 mouse_genomes_project 2 75947243 75950988 - MGP_WSBEiJ_P0054384 protein_coding protein_coding MGP_WSBEiJ_T0011301.1 MGP_WSBEiJ_G0009458.1 mouse_genomes_project 2 66074441 66074725 + Gm23046 misc_RNA misc_RNA MGP_WSBEiJ_T0056731.1 MGP_WSBEiJ_G0025779.1 mouse_genomes_project 2 133832947 133839242 - MGP_WSBEiJ_P0056731 Cenpb protein_coding protein_coding MGP_WSBEiJ_T0056233.1 MGP_WSBEiJ_G0025657.1 mouse_genomes_project 2 124257040 124324032 - MGP_WSBEiJ_P0056233 Spg11 protein_coding protein_coding MGP_WSBEiJ_T0056234.1 MGP_WSBEiJ_G0025657.1 mouse_genomes_project 2 124297661 124323942 - Spg11 protein_coding processed_transcript MGP_WSBEiJ_T0056235.1 MGP_WSBEiJ_G0025657.1 mouse_genomes_project 2 124313378 124324021 - Spg11 protein_coding processed_transcript MGP_WSBEiJ_T0099354.1 MGP_WSBEiJ_G0038017.1 mouse_genomes_project 2 53115355 53115488 + Gm22298 snoRNA snoRNA MGP_WSBEiJ_T0013497.1 MGP_WSBEiJ_G0011627.1 mouse_genomes_project 2 171677351 171677710 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007290.1 MGP_WSBEiJ_G0005980.1 mouse_genomes_project 2 172202010 172203224 + 9230111E07Rik lincRNA lincRNA MGP_WSBEiJ_T0058291.1 MGP_WSBEiJ_G0026152.1 mouse_genomes_project 2 171141622 171234470 + MGP_WSBEiJ_P0058291 Arfgef2 protein_coding protein_coding MGP_WSBEiJ_T0058292.1 MGP_WSBEiJ_G0026152.1 mouse_genomes_project 2 171159073 171185275 + MGP_WSBEiJ_P0058292 Arfgef2 protein_coding protein_coding MGP_WSBEiJ_T0010226.1 MGP_WSBEiJ_G0008383.1 mouse_genomes_project 2 27475943 27476023 - Mir133c miRNA miRNA MGP_WSBEiJ_T0058400.1 MGP_WSBEiJ_G0026175.1 mouse_genomes_project 2 172720495 172744307 - MGP_WSBEiJ_P0058400 Kcng1 protein_coding protein_coding MGP_WSBEiJ_T0058401.1 MGP_WSBEiJ_G0026175.1 mouse_genomes_project 2 172722076 172731616 - MGP_WSBEiJ_P0058401 Kcng1 protein_coding protein_coding MGP_WSBEiJ_T0058402.1 MGP_WSBEiJ_G0026175.1 mouse_genomes_project 2 172731383 172744958 - MGP_WSBEiJ_P0058402 Kcng1 protein_coding protein_coding MGP_WSBEiJ_T0055620.1 MGP_WSBEiJ_G0025525.1 mouse_genomes_project 2 113538249 113565482 - MGP_WSBEiJ_P0055620 Olfr1303 protein_coding protein_coding MGP_WSBEiJ_T0100745.1 MGP_WSBEiJ_G0039203.1 mouse_genomes_project 2 157269433 157313329 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0057660.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159868393 159905638 - MGP_WSBEiJ_P0057660 Rbm39 protein_coding protein_coding MGP_WSBEiJ_T0057661.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159868400 159904980 - MGP_WSBEiJ_P0057661 Rbm39 protein_coding protein_coding MGP_WSBEiJ_T0057662.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159868403 159905567 - MGP_WSBEiJ_P0057662 Rbm39 protein_coding protein_coding MGP_WSBEiJ_T0057663.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159868403 159905549 - MGP_WSBEiJ_P0057663 Rbm39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057664.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159869094 159905576 - MGP_WSBEiJ_P0057664 Rbm39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057665.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159869094 159905584 - MGP_WSBEiJ_P0057665 Rbm39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057666.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159870395 159888232 - MGP_WSBEiJ_P0057666 Rbm39 protein_coding protein_coding MGP_WSBEiJ_T0057667.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159885007 159905542 - MGP_WSBEiJ_P0057667 Rbm39 protein_coding protein_coding MGP_WSBEiJ_T0057668.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159885009 159888521 - Rbm39 protein_coding retained_intron MGP_WSBEiJ_T0057669.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159885991 159892860 - Rbm39 protein_coding processed_transcript MGP_WSBEiJ_T0057670.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159887303 159891771 - Rbm39 protein_coding retained_intron MGP_WSBEiJ_T0057671.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159888114 159905559 - MGP_WSBEiJ_P0057671 Rbm39 protein_coding protein_coding MGP_WSBEiJ_T0057672.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159888228 159898354 - Rbm39 protein_coding processed_transcript MGP_WSBEiJ_T0057673.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159891160 159903130 - Rbm39 protein_coding retained_intron MGP_WSBEiJ_T0057674.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159893455 159902781 - Rbm39 protein_coding processed_transcript MGP_WSBEiJ_T0057675.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159898225 159905561 - MGP_WSBEiJ_P0057675 Rbm39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057676.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159898324 159905547 - MGP_WSBEiJ_P0057676 Rbm39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057677.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159898346 159903300 - Rbm39 protein_coding retained_intron MGP_WSBEiJ_T0057678.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159900082 159905312 - MGP_WSBEiJ_P0057678 Rbm39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057679.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159900086 159905556 - MGP_WSBEiJ_P0057679 Rbm39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057680.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159900171 159905638 - MGP_WSBEiJ_P0057680 Rbm39 protein_coding protein_coding MGP_WSBEiJ_T0057681.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159902558 159905596 - Rbm39 protein_coding retained_intron MGP_WSBEiJ_T0057682.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159902758 159905549 - MGP_WSBEiJ_P0057682 Rbm39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057683.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159903958 159905612 - Rbm39 protein_coding retained_intron MGP_WSBEiJ_T0057684.1 MGP_WSBEiJ_G0026009.1 mouse_genomes_project 2 159903960 159905545 - Rbm39 protein_coding retained_intron MGP_WSBEiJ_T0011316.1 MGP_WSBEiJ_G0009473.1 mouse_genomes_project 2 148670792 148671117 - Gm22390 misc_RNA misc_RNA MGP_WSBEiJ_T0007324.1 MGP_WSBEiJ_G0006011.1 mouse_genomes_project 2 186019477 186035247 + Gm14344 lincRNA lincRNA MGP_WSBEiJ_T0013184.1 MGP_WSBEiJ_G0011314.1 mouse_genomes_project 2 49808034 49809906 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010186.1 MGP_WSBEiJ_G0008343.1 mouse_genomes_project 2 7819215 7819342 + Gm22091 miRNA miRNA MGP_WSBEiJ_T0057439.1 MGP_WSBEiJ_G0025970.1 mouse_genomes_project 2 158267533 158268034 - MGP_WSBEiJ_P0057439 4930519P11Rik protein_coding protein_coding MGP_WSBEiJ_T0013147.1 MGP_WSBEiJ_G0011277.1 mouse_genomes_project 2 35517951 35523618 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001065.1 MGP_WSBEiJ_G0000999.1 mouse_genomes_project 2 131774207 131776150 - TEC TEC MGP_WSBEiJ_T0052833.1 MGP_WSBEiJ_G0024836.1 mouse_genomes_project 2 28690932 28708080 + MGP_WSBEiJ_P0052833 Cstad protein_coding protein_coding MGP_WSBEiJ_T0052834.1 MGP_WSBEiJ_G0024836.1 mouse_genomes_project 2 28702468 28707354 + Cstad protein_coding processed_transcript MGP_WSBEiJ_T0058117.1 MGP_WSBEiJ_G0026121.1 mouse_genomes_project 2 168956849 168959430 - MGP_WSBEiJ_P0058117 Tnnc2 protein_coding protein_coding MGP_WSBEiJ_T0058118.1 MGP_WSBEiJ_G0026121.1 mouse_genomes_project 2 168957632 168959656 - Tnnc2 protein_coding processed_transcript MGP_WSBEiJ_T0007025.1 MGP_WSBEiJ_G0005767.1 mouse_genomes_project 2 4237874 4242730 + Gm26565 lincRNA lincRNA MGP_WSBEiJ_T0054971.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91644983 91695265 + Celf1 protein_coding processed_transcript MGP_WSBEiJ_T0054972.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91644998 91730014 + MGP_WSBEiJ_P0054972 Celf1 protein_coding protein_coding MGP_WSBEiJ_T0054973.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91645059 91706142 + Celf1 protein_coding processed_transcript MGP_WSBEiJ_T0054974.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91645138 91709014 + Celf1 protein_coding processed_transcript MGP_WSBEiJ_T0054975.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91646476 91729211 + MGP_WSBEiJ_P0054975 Celf1 protein_coding protein_coding MGP_WSBEiJ_T0054976.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91670499 91695327 + Celf1 protein_coding processed_transcript MGP_WSBEiJ_T0054977.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91695256 91730007 + MGP_WSBEiJ_P0054977 Celf1 protein_coding protein_coding MGP_WSBEiJ_T0054978.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91706104 91730014 + MGP_WSBEiJ_P0054978 Celf1 protein_coding protein_coding MGP_WSBEiJ_T0054979.1 MGP_WSBEiJ_G0025390.1 mouse_genomes_project 2 91723010 91723891 + Celf1 protein_coding processed_transcript MGP_WSBEiJ_T0057156.1 MGP_WSBEiJ_G0025885.1 mouse_genomes_project 2 154255842 154265945 - Abhd12 protein_coding processed_transcript MGP_WSBEiJ_T0057157.1 MGP_WSBEiJ_G0025885.1 mouse_genomes_project 2 154255842 154329344 - MGP_WSBEiJ_P0057157 Abhd12 protein_coding protein_coding MGP_WSBEiJ_T0057158.1 MGP_WSBEiJ_G0025885.1 mouse_genomes_project 2 154255866 154329334 - MGP_WSBEiJ_P0057158 Abhd12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057159.1 MGP_WSBEiJ_G0025885.1 mouse_genomes_project 2 154256465 154263090 - MGP_WSBEiJ_P0057159 Abhd12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057160.1 MGP_WSBEiJ_G0025885.1 mouse_genomes_project 2 154260708 154329265 - Abhd12 protein_coding processed_transcript MGP_WSBEiJ_T0057161.1 MGP_WSBEiJ_G0025885.1 mouse_genomes_project 2 154266412 154274871 - Abhd12 protein_coding retained_intron MGP_WSBEiJ_T0057162.1 MGP_WSBEiJ_G0025885.1 mouse_genomes_project 2 154269700 154329250 - MGP_WSBEiJ_P0057162 Abhd12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099381.1 MGP_WSBEiJ_G0038044.1 mouse_genomes_project 2 132675975 132676062 + Gm22424 snoRNA snoRNA MGP_WSBEiJ_T0056561.1 MGP_WSBEiJ_G0025741.1 mouse_genomes_project 2 131883168 131895335 - MGP_WSBEiJ_P0056561 Il1a protein_coding protein_coding MGP_WSBEiJ_T0004051.1 MGP_WSBEiJ_G0003587.1 mouse_genomes_project 2 159244961 159254794 - Acss2os antisense antisense MGP_WSBEiJ_T0058860.1 MGP_WSBEiJ_G0026279.1 mouse_genomes_project 2 186901369 186903174 - MGP_WSBEiJ_P0058860 Sox18 protein_coding protein_coding MGP_WSBEiJ_T0057065.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149446206 149728224 - MGP_WSBEiJ_P0057065 Ralgapa2 protein_coding protein_coding MGP_WSBEiJ_T0057066.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149450290 149658953 - MGP_WSBEiJ_P0057066 Ralgapa2 protein_coding protein_coding MGP_WSBEiJ_T0057067.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149451106 149467492 - Ralgapa2 protein_coding processed_transcript MGP_WSBEiJ_T0057068.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149454512 149728119 - MGP_WSBEiJ_P0057068 Ralgapa2 protein_coding protein_coding MGP_WSBEiJ_T0057069.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149464779 149600400 - MGP_WSBEiJ_P0057069 Ralgapa2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057070.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149521067 149728119 - MGP_WSBEiJ_P0057070 Ralgapa2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0057071.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149571080 149618984 - Ralgapa2 protein_coding retained_intron MGP_WSBEiJ_T0057072.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149617537 149625661 - Ralgapa2 protein_coding retained_intron MGP_WSBEiJ_T0057073.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149632835 149728131 - Ralgapa2 protein_coding retained_intron MGP_WSBEiJ_T0057074.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149642914 149728224 - Ralgapa2 protein_coding retained_intron MGP_WSBEiJ_T0057075.1 MGP_WSBEiJ_G0025852.1 mouse_genomes_project 2 149697449 149728246 - Ralgapa2 protein_coding retained_intron MGP_WSBEiJ_T0100726.1 MGP_WSBEiJ_G0039184.1 mouse_genomes_project 2 89033330 89035011 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097317.1 MGP_WSBEiJ_G0035992.1 mouse_genomes_project 2 57856827 57881293 + Gm13558 sense_intronic sense_intronic MGP_WSBEiJ_T0058540.1 MGP_WSBEiJ_G0026214.1 mouse_genomes_project 2 179271002 179288358 - MGP_WSBEiJ_P0058540 Gm20721 protein_coding protein_coding MGP_WSBEiJ_T0054718.1 MGP_WSBEiJ_G0025218.1 mouse_genomes_project 2 86676183 86677128 - MGP_WSBEiJ_P0054718 Olfr1044 protein_coding protein_coding MGP_WSBEiJ_T0007187.1 MGP_WSBEiJ_G0005897.1 mouse_genomes_project 2 116697291 117032538 - lincRNA lincRNA MGP_WSBEiJ_T0013253.1 MGP_WSBEiJ_G0011383.1 mouse_genomes_project 2 77256414 77256779 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003933.1 MGP_WSBEiJ_G0003505.1 mouse_genomes_project 2 73473639 73492761 + Chn1os3 antisense antisense MGP_WSBEiJ_T0003934.1 MGP_WSBEiJ_G0003505.1 mouse_genomes_project 2 73473937 73476316 + Chn1os3 antisense antisense MGP_WSBEiJ_T0010172.1 MGP_WSBEiJ_G0008329.1 mouse_genomes_project 2 7776944 7777041 + Mir669b miRNA miRNA MGP_WSBEiJ_T0003981.1 MGP_WSBEiJ_G0003533.1 mouse_genomes_project 2 117394717 117420413 - Gm13977 antisense antisense MGP_WSBEiJ_T0017146.1 MGP_WSBEiJ_G0014817.1 mouse_genomes_project 2 15628715 15631136 - 1810059C17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0055196.1 MGP_WSBEiJ_G0025418.1 mouse_genomes_project 2 93199184 93205726 + Pex16 protein_coding processed_transcript MGP_WSBEiJ_T0055197.1 MGP_WSBEiJ_G0025418.1 mouse_genomes_project 2 93199814 93205727 + MGP_WSBEiJ_P0055197 Pex16 protein_coding protein_coding MGP_WSBEiJ_T0055198.1 MGP_WSBEiJ_G0025418.1 mouse_genomes_project 2 93200001 93203831 + Pex16 protein_coding processed_transcript MGP_WSBEiJ_T0055199.1 MGP_WSBEiJ_G0025418.1 mouse_genomes_project 2 93200067 93201212 + Pex16 protein_coding processed_transcript MGP_WSBEiJ_T0057937.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 164920195 165088386 - MGP_WSBEiJ_P0057937 Chd6 protein_coding protein_coding MGP_WSBEiJ_T0057938.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 164932817 164934394 - Chd6 protein_coding processed_transcript MGP_WSBEiJ_T0057939.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 164932936 164937669 - Chd6 protein_coding processed_transcript MGP_WSBEiJ_T0057940.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 164953358 164957923 - Chd6 protein_coding retained_intron MGP_WSBEiJ_T0057941.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 164956060 165088386 - MGP_WSBEiJ_P0057941 Chd6 protein_coding protein_coding MGP_WSBEiJ_T0057942.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 164967851 164985406 - Chd6 protein_coding retained_intron MGP_WSBEiJ_T0057943.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 164984946 165088439 - Chd6 protein_coding retained_intron MGP_WSBEiJ_T0057944.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 164991004 164995162 - Chd6 protein_coding processed_transcript MGP_WSBEiJ_T0057945.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 165002775 165006438 - Chd6 protein_coding processed_transcript MGP_WSBEiJ_T0057946.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 165006728 165029317 - MGP_WSBEiJ_P0057946 Chd6 protein_coding protein_coding MGP_WSBEiJ_T0057947.1 MGP_WSBEiJ_G0026059.1 mouse_genomes_project 2 165011923 165088368 - Chd6 protein_coding retained_intron MGP_WSBEiJ_T0017205.1 MGP_WSBEiJ_G0014857.1 mouse_genomes_project 2 87748996 87753267 - Gm13734 processed_transcript processed_transcript MGP_WSBEiJ_T0052736.1 MGP_WSBEiJ_G0024823.1 mouse_genomes_project 2 28244971 28265334 - MGP_WSBEiJ_P0052736 Kyat1 protein_coding protein_coding MGP_WSBEiJ_T0052737.1 MGP_WSBEiJ_G0024823.1 mouse_genomes_project 2 28244973 28265303 - Kyat1 protein_coding processed_transcript MGP_WSBEiJ_T0052738.1 MGP_WSBEiJ_G0024823.1 mouse_genomes_project 2 28244973 28265262 - MGP_WSBEiJ_P0052738 Kyat1 protein_coding protein_coding MGP_WSBEiJ_T0052739.1 MGP_WSBEiJ_G0024823.1 mouse_genomes_project 2 28244978 28258081 - MGP_WSBEiJ_P0052739 Kyat1 protein_coding protein_coding MGP_WSBEiJ_T0052740.1 MGP_WSBEiJ_G0024823.1 mouse_genomes_project 2 28244978 28265288 - MGP_WSBEiJ_P0052740 Kyat1 protein_coding protein_coding MGP_WSBEiJ_T0052741.1 MGP_WSBEiJ_G0024823.1 mouse_genomes_project 2 28245115 28253955 - MGP_WSBEiJ_P0052741 Kyat1 protein_coding protein_coding MGP_WSBEiJ_T0052742.1 MGP_WSBEiJ_G0024823.1 mouse_genomes_project 2 28245115 28253955 - MGP_WSBEiJ_P0052742 Kyat1 protein_coding protein_coding MGP_WSBEiJ_T0052743.1 MGP_WSBEiJ_G0024823.1 mouse_genomes_project 2 28250969 28265276 - Kyat1 protein_coding processed_transcript MGP_WSBEiJ_T0013106.1 MGP_WSBEiJ_G0011236.1 mouse_genomes_project 2 17274953 17275058 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053421.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34542348 34564461 - MGP_WSBEiJ_P0053421 Lhx6 protein_coding protein_coding MGP_WSBEiJ_T0053422.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34542348 34564461 - MGP_WSBEiJ_P0053422 Lhx6 protein_coding protein_coding MGP_WSBEiJ_T0053423.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34542348 34565809 - MGP_WSBEiJ_P0053423 Lhx6 protein_coding protein_coding MGP_WSBEiJ_T0053424.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34542348 34565672 - MGP_WSBEiJ_P0053424 Lhx6 protein_coding protein_coding MGP_WSBEiJ_T0053425.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34542349 34565809 - MGP_WSBEiJ_P0053425 Lhx6 protein_coding protein_coding MGP_WSBEiJ_T0053426.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34544083 34554669 - MGP_WSBEiJ_P0053426 Lhx6 protein_coding protein_coding MGP_WSBEiJ_T0053427.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34544086 34565292 - MGP_WSBEiJ_P0053427 Lhx6 protein_coding protein_coding MGP_WSBEiJ_T0053428.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34554620 34563993 - Lhx6 protein_coding retained_intron MGP_WSBEiJ_T0053429.1 MGP_WSBEiJ_G0024925.1 mouse_genomes_project 2 34561710 34565656 - Lhx6 protein_coding processed_transcript MGP_WSBEiJ_T0017199.1 MGP_WSBEiJ_G0014851.1 mouse_genomes_project 2 75650994 75656218 + E030042O20Rik processed_transcript processed_transcript MGP_WSBEiJ_T0058757.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186528194 186566206 + MGP_WSBEiJ_P0058757 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058758.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186528208 186557046 + Rtel1 protein_coding retained_intron MGP_WSBEiJ_T0058759.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186528217 186566168 + Rtel1 protein_coding retained_intron MGP_WSBEiJ_T0058760.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186528217 186566206 + MGP_WSBEiJ_P0058760 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058761.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186528240 186566206 + MGP_WSBEiJ_P0058761 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058762.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186528240 186566168 + MGP_WSBEiJ_P0058762 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058763.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186528240 186566206 + MGP_WSBEiJ_P0058763 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058764.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186528418 186532150 + MGP_WSBEiJ_P0058764 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058765.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186537059 186566206 + MGP_WSBEiJ_P0058765 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058766.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186544631 186556636 + MGP_WSBEiJ_P0058766 Rtel1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058767.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186547808 186556619 + Rtel1 protein_coding retained_intron MGP_WSBEiJ_T0058768.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186559044 186559545 + Rtel1 protein_coding retained_intron MGP_WSBEiJ_T0058769.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186559607 186561653 + Rtel1 protein_coding retained_intron MGP_WSBEiJ_T0058770.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186559717 186560745 + Rtel1 protein_coding retained_intron MGP_WSBEiJ_T0058771.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186561671 186565142 + Rtel1 protein_coding retained_intron MGP_WSBEiJ_T0058772.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186563989 186565403 + Rtel1 protein_coding processed_transcript MGP_WSBEiJ_T0058773.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186564792 186565607 + Rtel1 protein_coding retained_intron MGP_WSBEiJ_T0058774.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186565283 186566205 + Rtel1 protein_coding processed_transcript MGP_WSBEiJ_T0058775.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186565354 186566204 + MGP_WSBEiJ_P0058775 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058776.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186565559 186566206 + MGP_WSBEiJ_P0058776 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058777.1 MGP_WSBEiJ_G0026266.1 mouse_genomes_project 2 186565559 186566206 + MGP_WSBEiJ_P0058777 Rtel1 protein_coding protein_coding MGP_WSBEiJ_T0058585.1 MGP_WSBEiJ_G0026228.1 mouse_genomes_project 2 185025322 185094830 - MGP_WSBEiJ_P0058585 Taf4 protein_coding protein_coding MGP_WSBEiJ_T0058586.1 MGP_WSBEiJ_G0026228.1 mouse_genomes_project 2 185027897 185094442 - MGP_WSBEiJ_P0058586 Taf4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0058587.1 MGP_WSBEiJ_G0026228.1 mouse_genomes_project 2 185037041 185038022 - Taf4 protein_coding processed_transcript MGP_WSBEiJ_T0058588.1 MGP_WSBEiJ_G0026228.1 mouse_genomes_project 2 185037817 185045140 - Taf4 protein_coding processed_transcript MGP_WSBEiJ_T0010243.1 MGP_WSBEiJ_G0008400.1 mouse_genomes_project 2 36134311 36134395 - Mir5128 miRNA miRNA MGP_WSBEiJ_T0053186.1 MGP_WSBEiJ_G0024888.1 mouse_genomes_project 2 31063202 31065019 + MGP_WSBEiJ_P0053186 Ptrh1 protein_coding protein_coding MGP_WSBEiJ_T0053187.1 MGP_WSBEiJ_G0024888.1 mouse_genomes_project 2 31063232 31064172 + Ptrh1 protein_coding processed_transcript MGP_WSBEiJ_T0053188.1 MGP_WSBEiJ_G0024888.1 mouse_genomes_project 2 31063281 31064871 + Ptrh1 protein_coding retained_intron MGP_WSBEiJ_T0054724.1 MGP_WSBEiJ_G0025224.1 mouse_genomes_project 2 86791379 86792572 - MGP_WSBEiJ_P0054724 Olfr1046 protein_coding protein_coding MGP_WSBEiJ_T0004102.1 MGP_WSBEiJ_G0003626.1 mouse_genomes_project 2 178150300 178152031 + Pmepa1os antisense antisense MGP_WSBEiJ_T0010311.1 MGP_WSBEiJ_G0008468.1 mouse_genomes_project 2 172055982 172056078 - Gm22355 miRNA miRNA MGP_WSBEiJ_T0013129.1 MGP_WSBEiJ_G0011259.1 mouse_genomes_project 2 26755929 26756149 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010262.1 MGP_WSBEiJ_G0008419.1 mouse_genomes_project 2 80950744 80950830 - Mir684-1 miRNA miRNA MGP_WSBEiJ_T0004024.1 MGP_WSBEiJ_G0003565.1 mouse_genomes_project 2 144295499 144355838 - Macrod2os1 antisense antisense MGP_WSBEiJ_T0056368.1 MGP_WSBEiJ_G0025694.1 mouse_genomes_project 2 128987172 129026620 + MGP_WSBEiJ_P0056368 Slc27a2 protein_coding protein_coding MGP_WSBEiJ_T0056369.1 MGP_WSBEiJ_G0025694.1 mouse_genomes_project 2 128988355 128999575 + Slc27a2 protein_coding processed_transcript MGP_WSBEiJ_T0056370.1 MGP_WSBEiJ_G0025694.1 mouse_genomes_project 2 128990894 129026315 + MGP_WSBEiJ_P0056370 Slc27a2 protein_coding protein_coding MGP_WSBEiJ_T0056371.1 MGP_WSBEiJ_G0025694.1 mouse_genomes_project 2 128999649 129013842 + Slc27a2 protein_coding processed_transcript MGP_WSBEiJ_T0057506.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159214246 159260674 + MGP_WSBEiJ_P0057506 Acss2 protein_coding protein_coding MGP_WSBEiJ_T0057507.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159214331 159221547 + Acss2 protein_coding retained_intron MGP_WSBEiJ_T0057508.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159214355 159283695 + MGP_WSBEiJ_P0057508 Acss2 protein_coding protein_coding MGP_WSBEiJ_T0057509.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159214367 159250261 + Acss2 protein_coding retained_intron MGP_WSBEiJ_T0057510.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159214405 159260008 + MGP_WSBEiJ_P0057510 Acss2 protein_coding protein_coding MGP_WSBEiJ_T0057511.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159214405 159260008 + MGP_WSBEiJ_P0057511 Acss2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057512.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159247092 159247731 + Acss2 protein_coding retained_intron MGP_WSBEiJ_T0057513.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159247103 159255228 + MGP_WSBEiJ_P0057513 Acss2 protein_coding protein_coding MGP_WSBEiJ_T0057518.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159266576 159283237 + Acss2 protein_coding processed_transcript MGP_WSBEiJ_T0057519.1 MGP_WSBEiJ_G0025985.1 mouse_genomes_project 2 159270881 159275009 + Acss2 protein_coding retained_intron MGP_WSBEiJ_T0053101.1 MGP_WSBEiJ_G0024873.1 mouse_genomes_project 2 30708577 30715074 + MGP_WSBEiJ_P0053101 Naif1 protein_coding protein_coding MGP_WSBEiJ_T0057251.1 MGP_WSBEiJ_G0025910.1 mouse_genomes_project 2 155950359 155957095 - MGP_WSBEiJ_P0057251 Defb23 protein_coding protein_coding MGP_WSBEiJ_T0098141.1 MGP_WSBEiJ_G0036804.1 mouse_genomes_project 2 186382888 186382992 + Gm24892 snRNA snRNA MGP_WSBEiJ_T0054834.1 MGP_WSBEiJ_G0025320.1 mouse_genomes_project 2 89547720 89559193 - MGP_WSBEiJ_P0054834 Olfr1200 protein_coding protein_coding MGP_WSBEiJ_T0055472.1 MGP_WSBEiJ_G0025472.1 mouse_genomes_project 2 106094373 106096601 - MGP_WSBEiJ_P0055472 Pin1rt1 protein_coding protein_coding MGP_WSBEiJ_T0054940.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91471084 91511070 + MGP_WSBEiJ_P0054940 Agbl2 protein_coding protein_coding MGP_WSBEiJ_T0054941.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91471084 91529153 + MGP_WSBEiJ_P0054941 Agbl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054942.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91471085 91504495 + MGP_WSBEiJ_P0054942 Agbl2 protein_coding protein_coding MGP_WSBEiJ_T0054943.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91471101 91510057 + MGP_WSBEiJ_P0054943 Agbl2 protein_coding protein_coding MGP_WSBEiJ_T0054944.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91472192 91508095 + MGP_WSBEiJ_P0054944 Agbl2 protein_coding protein_coding MGP_WSBEiJ_T0054945.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91472219 91523984 + Agbl2 protein_coding processed_transcript MGP_WSBEiJ_T0054946.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91472222 91509339 + MGP_WSBEiJ_P0054946 Agbl2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0054947.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91472527 91510057 + MGP_WSBEiJ_P0054947 Agbl2 protein_coding protein_coding MGP_WSBEiJ_T0054948.1 MGP_WSBEiJ_G0025385.1 mouse_genomes_project 2 91473014 91489220 + Agbl2 protein_coding processed_transcript MGP_WSBEiJ_T0054836.1 MGP_WSBEiJ_G0025322.1 mouse_genomes_project 2 89602322 89604535 + MGP_WSBEiJ_P0054836 Olfr1201 protein_coding protein_coding MGP_WSBEiJ_T0013509.1 MGP_WSBEiJ_G0011639.1 mouse_genomes_project 2 184457487 184458238 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011324.1 MGP_WSBEiJ_G0009481.1 mouse_genomes_project 2 171408697 171408886 + Gm27494 misc_RNA misc_RNA MGP_WSBEiJ_T0013239.1 MGP_WSBEiJ_G0011369.1 mouse_genomes_project 2 70548097 70548995 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058575.1 MGP_WSBEiJ_G0026226.1 mouse_genomes_project 2 183506878 183559863 + MGP_WSBEiJ_P0058575 Cdh26 protein_coding protein_coding MGP_WSBEiJ_T0058576.1 MGP_WSBEiJ_G0026226.1 mouse_genomes_project 2 183506954 183559865 + MGP_WSBEiJ_P0058576 Cdh26 protein_coding protein_coding MGP_WSBEiJ_T0058577.1 MGP_WSBEiJ_G0026226.1 mouse_genomes_project 2 183507135 183559872 + MGP_WSBEiJ_P0058577 Cdh26 protein_coding unknown_likely_coding MGP_WSBEiJ_T0058578.1 MGP_WSBEiJ_G0026226.1 mouse_genomes_project 2 183531041 183538136 + Cdh26 protein_coding retained_intron MGP_WSBEiJ_T0003837.1 MGP_WSBEiJ_G0003432.1 mouse_genomes_project 2 18623706 18624650 + Gm13375 antisense antisense MGP_WSBEiJ_T0055794.1 MGP_WSBEiJ_G0025576.1 mouse_genomes_project 2 120848421 120870895 + MGP_WSBEiJ_P0055794 Ivd protein_coding protein_coding MGP_WSBEiJ_T0055795.1 MGP_WSBEiJ_G0025576.1 mouse_genomes_project 2 120848495 120856128 + Ivd protein_coding retained_intron MGP_WSBEiJ_T0055796.1 MGP_WSBEiJ_G0025576.1 mouse_genomes_project 2 120857108 120858042 + Ivd protein_coding processed_transcript MGP_WSBEiJ_T0055797.1 MGP_WSBEiJ_G0025576.1 mouse_genomes_project 2 120858067 120862729 + Ivd protein_coding processed_transcript MGP_WSBEiJ_T0055798.1 MGP_WSBEiJ_G0025576.1 mouse_genomes_project 2 120858543 120860539 + Ivd protein_coding retained_intron MGP_WSBEiJ_T0055799.1 MGP_WSBEiJ_G0025576.1 mouse_genomes_project 2 120860084 120867753 + Ivd protein_coding processed_transcript MGP_WSBEiJ_T0055800.1 MGP_WSBEiJ_G0025576.1 mouse_genomes_project 2 120861476 120868188 + Ivd protein_coding processed_transcript MGP_WSBEiJ_T0055801.1 MGP_WSBEiJ_G0025576.1 mouse_genomes_project 2 120862202 120863715 + Ivd protein_coding processed_transcript MGP_WSBEiJ_T0054015.1 MGP_WSBEiJ_G0025045.1 mouse_genomes_project 2 65262301 65463043 + MGP_WSBEiJ_P0054015 Csrnp3 protein_coding protein_coding MGP_WSBEiJ_T0054016.1 MGP_WSBEiJ_G0025045.1 mouse_genomes_project 2 65262376 65457106 + MGP_WSBEiJ_P0054016 Csrnp3 protein_coding protein_coding MGP_WSBEiJ_T0054017.1 MGP_WSBEiJ_G0025045.1 mouse_genomes_project 2 65262379 65296149 + Csrnp3 protein_coding retained_intron MGP_WSBEiJ_T0054018.1 MGP_WSBEiJ_G0025045.1 mouse_genomes_project 2 65262389 65454779 + MGP_WSBEiJ_P0054018 Csrnp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054019.1 MGP_WSBEiJ_G0025045.1 mouse_genomes_project 2 65277170 65378000 + Csrnp3 protein_coding retained_intron MGP_WSBEiJ_T0054020.1 MGP_WSBEiJ_G0025045.1 mouse_genomes_project 2 65352709 65455446 + MGP_WSBEiJ_P0054020 Csrnp3 protein_coding protein_coding MGP_WSBEiJ_T0054021.1 MGP_WSBEiJ_G0025045.1 mouse_genomes_project 2 65355498 65454984 + MGP_WSBEiJ_P0054021 Csrnp3 protein_coding protein_coding MGP_WSBEiJ_T0054022.1 MGP_WSBEiJ_G0025045.1 mouse_genomes_project 2 65377509 65454553 + MGP_WSBEiJ_P0054022 Csrnp3 protein_coding protein_coding MGP_WSBEiJ_T0013237.1 MGP_WSBEiJ_G0011367.1 mouse_genomes_project 2 69433176 69433555 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010180.1 MGP_WSBEiJ_G0008337.1 mouse_genomes_project 2 7782418 7782502 + Mir466o miRNA miRNA MGP_WSBEiJ_T0003806.1 MGP_WSBEiJ_G0003407.1 mouse_genomes_project 2 437166 443100 + Gm13184 antisense antisense MGP_WSBEiJ_T0017282.1 MGP_WSBEiJ_G0014892.1 mouse_genomes_project 2 133169506 133190074 - 4930473A02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0057432.1 MGP_WSBEiJ_G0025967.1 mouse_genomes_project 2 158201400 158202899 + MGP_WSBEiJ_P0057432 Actl10 protein_coding protein_coding MGP_WSBEiJ_T0053765.1 MGP_WSBEiJ_G0025005.1 mouse_genomes_project 2 53458746 54143698 + MGP_WSBEiJ_P0053765 Galnt13 protein_coding protein_coding MGP_WSBEiJ_T0053766.1 MGP_WSBEiJ_G0025005.1 mouse_genomes_project 2 53458816 54143698 + MGP_WSBEiJ_P0053766 Galnt13 protein_coding protein_coding MGP_WSBEiJ_T0053767.1 MGP_WSBEiJ_G0025005.1 mouse_genomes_project 2 53458816 54143698 + MGP_WSBEiJ_P0053767 Galnt13 protein_coding protein_coding MGP_WSBEiJ_T0053768.1 MGP_WSBEiJ_G0025005.1 mouse_genomes_project 2 53458920 53747396 + MGP_WSBEiJ_P0053768 Galnt13 protein_coding protein_coding MGP_WSBEiJ_T0053769.1 MGP_WSBEiJ_G0025005.1 mouse_genomes_project 2 53545179 54137316 + MGP_WSBEiJ_P0053769 Galnt13 protein_coding protein_coding MGP_WSBEiJ_T0004036.1 MGP_WSBEiJ_G0003573.1 mouse_genomes_project 2 149465394 149473276 + A930019D19Rik antisense antisense MGP_WSBEiJ_T0056628.1 MGP_WSBEiJ_G0025757.1 mouse_genomes_project 2 133027877 133029307 + MGP_WSBEiJ_P0056628 Tmem239 protein_coding protein_coding MGP_WSBEiJ_T0052727.1 MGP_WSBEiJ_G0024821.1 mouse_genomes_project 2 28230588 28233212 + MGP_WSBEiJ_P0052727 Endog protein_coding protein_coding MGP_WSBEiJ_T0052806.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28465980 28481271 - MGP_WSBEiJ_P0052806 Crat protein_coding protein_coding MGP_WSBEiJ_T0052807.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28465985 28472190 - Crat protein_coding processed_transcript MGP_WSBEiJ_T0052808.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28466610 28481313 - MGP_WSBEiJ_P0052808 Crat protein_coding protein_coding MGP_WSBEiJ_T0052809.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28468007 28470798 - MGP_WSBEiJ_P0052809 Crat protein_coding protein_coding MGP_WSBEiJ_T0052810.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28468087 28481024 - MGP_WSBEiJ_P0052810 Crat protein_coding protein_coding MGP_WSBEiJ_T0052811.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28468146 28470471 - MGP_WSBEiJ_P0052811 Crat protein_coding protein_coding MGP_WSBEiJ_T0052812.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28473580 28480808 - MGP_WSBEiJ_P0052812 Crat protein_coding protein_coding MGP_WSBEiJ_T0052813.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28473625 28481048 - MGP_WSBEiJ_P0052813 Crat protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052814.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28478545 28479839 - Crat protein_coding processed_transcript MGP_WSBEiJ_T0052815.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28478641 28481018 - MGP_WSBEiJ_P0052815 Crat protein_coding protein_coding MGP_WSBEiJ_T0052816.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28478662 28480833 - MGP_WSBEiJ_P0052816 Crat protein_coding protein_coding MGP_WSBEiJ_T0052817.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28479559 28481100 - Crat protein_coding processed_transcript MGP_WSBEiJ_T0052818.1 MGP_WSBEiJ_G0024833.1 mouse_genomes_project 2 28480094 28480907 - MGP_WSBEiJ_P0052818 Crat protein_coding protein_coding MGP_WSBEiJ_T0058057.1 MGP_WSBEiJ_G0026097.1 mouse_genomes_project 2 168516929 168532357 - MGP_WSBEiJ_P0058057 Matn4 protein_coding protein_coding MGP_WSBEiJ_T0058058.1 MGP_WSBEiJ_G0026097.1 mouse_genomes_project 2 168516929 168532355 - MGP_WSBEiJ_P0058058 Matn4 protein_coding protein_coding MGP_WSBEiJ_T0058059.1 MGP_WSBEiJ_G0026097.1 mouse_genomes_project 2 168516929 168532903 - MGP_WSBEiJ_P0058059 Matn4 protein_coding protein_coding MGP_WSBEiJ_T0058060.1 MGP_WSBEiJ_G0026097.1 mouse_genomes_project 2 168516929 168532355 - MGP_WSBEiJ_P0058060 Matn4 protein_coding protein_coding MGP_WSBEiJ_T0058061.1 MGP_WSBEiJ_G0026097.1 mouse_genomes_project 2 168521321 168532356 - Matn4 protein_coding retained_intron MGP_WSBEiJ_T0051639.1 MGP_WSBEiJ_G0024628.1 mouse_genomes_project 2 11683679 11786732 + MGP_WSBEiJ_P0051639 Mrc1 protein_coding protein_coding MGP_WSBEiJ_T0051640.1 MGP_WSBEiJ_G0024628.1 mouse_genomes_project 2 11783227 11786602 + Mrc1 protein_coding retained_intron MGP_WSBEiJ_T0051992.1 MGP_WSBEiJ_G0024687.1 mouse_genomes_project 2 22916649 22919231 + MGP_WSBEiJ_P0051992 Nrarp protein_coding protein_coding MGP_WSBEiJ_T0053173.1 MGP_WSBEiJ_G0024887.1 mouse_genomes_project 2 31043530 31049490 + MGP_WSBEiJ_P0053173 Tor2a protein_coding protein_coding MGP_WSBEiJ_T0053174.1 MGP_WSBEiJ_G0024887.1 mouse_genomes_project 2 31043541 31049185 + MGP_WSBEiJ_P0053174 Tor2a protein_coding protein_coding MGP_WSBEiJ_T0053175.1 MGP_WSBEiJ_G0024887.1 mouse_genomes_project 2 31043551 31048976 + MGP_WSBEiJ_P0053175 Tor2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053176.1 MGP_WSBEiJ_G0024887.1 mouse_genomes_project 2 31043556 31049490 + MGP_WSBEiJ_P0053176 Tor2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053177.1 MGP_WSBEiJ_G0024887.1 mouse_genomes_project 2 31043572 31049488 + Tor2a protein_coding retained_intron MGP_WSBEiJ_T0053178.1 MGP_WSBEiJ_G0024887.1 mouse_genomes_project 2 31043587 31044280 + Tor2a protein_coding processed_transcript MGP_WSBEiJ_T0053179.1 MGP_WSBEiJ_G0024887.1 mouse_genomes_project 2 31043615 31048840 + MGP_WSBEiJ_P0053179 Tor2a protein_coding protein_coding MGP_WSBEiJ_T0053180.1 MGP_WSBEiJ_G0024887.1 mouse_genomes_project 2 31046564 31049035 + Tor2a protein_coding retained_intron MGP_WSBEiJ_T0054053.1 MGP_WSBEiJ_G0025054.1 mouse_genomes_project 2 67762249 68040250 - MGP_WSBEiJ_P0054053 Stk39 protein_coding protein_coding MGP_WSBEiJ_T0054054.1 MGP_WSBEiJ_G0025054.1 mouse_genomes_project 2 67762252 67924633 - Stk39 protein_coding retained_intron MGP_WSBEiJ_T0054055.1 MGP_WSBEiJ_G0025054.1 mouse_genomes_project 2 67763544 67776354 - Stk39 protein_coding processed_transcript MGP_WSBEiJ_T0054056.1 MGP_WSBEiJ_G0025054.1 mouse_genomes_project 2 67763544 67804999 - Stk39 protein_coding processed_transcript MGP_WSBEiJ_T0054057.1 MGP_WSBEiJ_G0025054.1 mouse_genomes_project 2 67763544 67805004 - Stk39 protein_coding processed_transcript MGP_WSBEiJ_T0054058.1 MGP_WSBEiJ_G0025054.1 mouse_genomes_project 2 67763551 67804977 - Stk39 protein_coding processed_transcript MGP_WSBEiJ_T0054059.1 MGP_WSBEiJ_G0025054.1 mouse_genomes_project 2 67817402 68039922 - Stk39 protein_coding retained_intron MGP_WSBEiJ_T0054060.1 MGP_WSBEiJ_G0025054.1 mouse_genomes_project 2 67917091 67948025 - Stk39 protein_coding processed_transcript MGP_WSBEiJ_T0051271.1 MGP_WSBEiJ_G0024568.1 mouse_genomes_project 2 67880 184754 + MGP_WSBEiJ_P0051271 Fam171a1 protein_coding protein_coding MGP_WSBEiJ_T0051272.1 MGP_WSBEiJ_G0024568.1 mouse_genomes_project 2 68023 185311 + MGP_WSBEiJ_P0051272 Fam171a1 protein_coding protein_coding MGP_WSBEiJ_T0051273.1 MGP_WSBEiJ_G0024568.1 mouse_genomes_project 2 68152 185308 + MGP_WSBEiJ_P0051273 Fam171a1 protein_coding protein_coding MGP_WSBEiJ_T0017283.1 MGP_WSBEiJ_G0014893.1 mouse_genomes_project 2 133531186 133558025 - A730017L22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017284.1 MGP_WSBEiJ_G0014893.1 mouse_genomes_project 2 133535089 133558048 - A730017L22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0057697.1 MGP_WSBEiJ_G0026012.1 mouse_genomes_project 2 160043037 160104874 + MGP_WSBEiJ_P0057697 Cnbd2 protein_coding protein_coding MGP_WSBEiJ_T0057698.1 MGP_WSBEiJ_G0026012.1 mouse_genomes_project 2 160043316 160073930 + Cnbd2 protein_coding processed_transcript MGP_WSBEiJ_T0057699.1 MGP_WSBEiJ_G0026012.1 mouse_genomes_project 2 160043355 160051719 + Cnbd2 protein_coding retained_intron MGP_WSBEiJ_T0057700.1 MGP_WSBEiJ_G0026012.1 mouse_genomes_project 2 160043371 160104877 + MGP_WSBEiJ_P0057700 Cnbd2 protein_coding protein_coding MGP_WSBEiJ_T0057701.1 MGP_WSBEiJ_G0026012.1 mouse_genomes_project 2 160067634 160074532 + Cnbd2 protein_coding processed_transcript MGP_WSBEiJ_T0058659.1 MGP_WSBEiJ_G0026246.1 mouse_genomes_project 2 185785708 185807293 - MGP_WSBEiJ_P0058659 Tcfl5 protein_coding protein_coding MGP_WSBEiJ_T0058660.1 MGP_WSBEiJ_G0026246.1 mouse_genomes_project 2 185786344 185806869 - MGP_WSBEiJ_P0058660 Tcfl5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0058661.1 MGP_WSBEiJ_G0026246.1 mouse_genomes_project 2 185799906 185807208 - MGP_WSBEiJ_P0058661 Tcfl5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058662.1 MGP_WSBEiJ_G0026246.1 mouse_genomes_project 2 185802118 185806999 - Tcfl5 protein_coding retained_intron MGP_WSBEiJ_T0013361.1 MGP_WSBEiJ_G0011491.1 mouse_genomes_project 2 113538249 113565482 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055156.1 MGP_WSBEiJ_G0025414.1 mouse_genomes_project 2 92733745 92736909 + MGP_WSBEiJ_P0055156 Gm9821 protein_coding protein_coding MGP_WSBEiJ_T0053933.1 MGP_WSBEiJ_G0025032.1 mouse_genomes_project 2 61336318 61614208 + MGP_WSBEiJ_P0053933 Slc4a10 protein_coding protein_coding MGP_WSBEiJ_T0053934.1 MGP_WSBEiJ_G0025032.1 mouse_genomes_project 2 61336441 61612302 + Slc4a10 protein_coding processed_transcript MGP_WSBEiJ_T0053935.1 MGP_WSBEiJ_G0025032.1 mouse_genomes_project 2 61336441 61614208 + MGP_WSBEiJ_P0053935 Slc4a10 protein_coding protein_coding MGP_WSBEiJ_T0053936.1 MGP_WSBEiJ_G0025032.1 mouse_genomes_project 2 61336501 61614208 + MGP_WSBEiJ_P0053936 Slc4a10 protein_coding protein_coding MGP_WSBEiJ_T0053937.1 MGP_WSBEiJ_G0025032.1 mouse_genomes_project 2 61444188 61454787 + Slc4a10 protein_coding processed_transcript MGP_WSBEiJ_T0053938.1 MGP_WSBEiJ_G0025032.1 mouse_genomes_project 2 61552977 61554714 + Slc4a10 protein_coding processed_transcript MGP_WSBEiJ_T0053939.1 MGP_WSBEiJ_G0025032.1 mouse_genomes_project 2 61605029 61612856 + Slc4a10 protein_coding processed_transcript MGP_WSBEiJ_T0051638.1 MGP_WSBEiJ_G0024627.1 mouse_genomes_project 2 11606742 11673166 + MGP_WSBEiJ_P0051638 Tmem236 protein_coding protein_coding MGP_WSBEiJ_T0054562.1 MGP_WSBEiJ_G0025157.1 mouse_genomes_project 2 84287482 84308680 - MGP_WSBEiJ_P0054562 Zswim2 protein_coding protein_coding MGP_WSBEiJ_T0054563.1 MGP_WSBEiJ_G0025157.1 mouse_genomes_project 2 84289172 84308682 - MGP_WSBEiJ_P0054563 Zswim2 protein_coding protein_coding MGP_WSBEiJ_T0054564.1 MGP_WSBEiJ_G0025157.1 mouse_genomes_project 2 84296246 84296687 - Zswim2 protein_coding processed_transcript MGP_WSBEiJ_T0013380.1 MGP_WSBEiJ_G0011510.1 mouse_genomes_project 2 124418163 124418509 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053873.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59385798 59425958 + MGP_WSBEiJ_P0053873 March7 protein_coding protein_coding MGP_WSBEiJ_T0053874.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59385824 59427418 + March7 protein_coding processed_transcript MGP_WSBEiJ_T0053875.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59385984 59424720 + MGP_WSBEiJ_P0053875 March7 protein_coding protein_coding MGP_WSBEiJ_T0053876.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59400569 59424704 + MGP_WSBEiJ_P0053876 March7 protein_coding protein_coding MGP_WSBEiJ_T0053877.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59408069 59411110 + March7 protein_coding processed_transcript MGP_WSBEiJ_T0053878.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59413479 59424704 + MGP_WSBEiJ_P0053878 March7 protein_coding protein_coding MGP_WSBEiJ_T0053879.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59413613 59419874 + March7 protein_coding processed_transcript MGP_WSBEiJ_T0053880.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59419808 59424702 + March7 protein_coding processed_transcript MGP_WSBEiJ_T0053881.1 MGP_WSBEiJ_G0025023.1 mouse_genomes_project 2 59424089 59424704 + March7 protein_coding processed_transcript MGP_WSBEiJ_T0013241.1 MGP_WSBEiJ_G0011371.1 mouse_genomes_project 2 72160577 72160873 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054238.1 MGP_WSBEiJ_G0025090.1 mouse_genomes_project 2 71520345 71600248 + Itga6 protein_coding processed_transcript MGP_WSBEiJ_T0054239.1 MGP_WSBEiJ_G0025090.1 mouse_genomes_project 2 71562830 71600937 + Itga6 protein_coding processed_transcript MGP_WSBEiJ_T0054240.1 MGP_WSBEiJ_G0025090.1 mouse_genomes_project 2 71562841 71637507 + MGP_WSBEiJ_P0054240 Itga6 protein_coding protein_coding MGP_WSBEiJ_T0054241.1 MGP_WSBEiJ_G0025090.1 mouse_genomes_project 2 71563040 71639161 + MGP_WSBEiJ_P0054241 Itga6 protein_coding protein_coding MGP_WSBEiJ_T0054242.1 MGP_WSBEiJ_G0025090.1 mouse_genomes_project 2 71618051 71618885 + Itga6 protein_coding processed_transcript MGP_WSBEiJ_T0054243.1 MGP_WSBEiJ_G0025090.1 mouse_genomes_project 2 71629011 71639152 + Itga6 protein_coding processed_transcript MGP_WSBEiJ_T0058105.1 MGP_WSBEiJ_G0026115.1 mouse_genomes_project 2 168856882 168859493 + MGP_WSBEiJ_P0058105 Wfdc13 protein_coding protein_coding MGP_WSBEiJ_T0013230.1 MGP_WSBEiJ_G0011360.1 mouse_genomes_project 2 67290750 67290833 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013358.1 MGP_WSBEiJ_G0011488.1 mouse_genomes_project 2 113412518 113413452 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056669.1 MGP_WSBEiJ_G0025769.1 mouse_genomes_project 2 133323292 133327743 - Slc4a11 protein_coding retained_intron MGP_WSBEiJ_T0056670.1 MGP_WSBEiJ_G0025769.1 mouse_genomes_project 2 133323292 133336981 - MGP_WSBEiJ_P0056670 Slc4a11 protein_coding protein_coding MGP_WSBEiJ_T0056671.1 MGP_WSBEiJ_G0025769.1 mouse_genomes_project 2 133325754 133336931 - Slc4a11 protein_coding retained_intron MGP_WSBEiJ_T0056672.1 MGP_WSBEiJ_G0025769.1 mouse_genomes_project 2 133329784 133330934 - Slc4a11 protein_coding retained_intron MGP_WSBEiJ_T0056673.1 MGP_WSBEiJ_G0025769.1 mouse_genomes_project 2 133330500 133336931 - MGP_WSBEiJ_P0056673 Slc4a11 protein_coding protein_coding MGP_WSBEiJ_T0013456.1 MGP_WSBEiJ_G0011586.1 mouse_genomes_project 2 156951004 156951286 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056924.1 MGP_WSBEiJ_G0025821.1 mouse_genomes_project 2 143127042 143179458 - MGP_WSBEiJ_P0056924 Esf1 protein_coding protein_coding MGP_WSBEiJ_T0056925.1 MGP_WSBEiJ_G0025821.1 mouse_genomes_project 2 143154479 143160982 - Esf1 protein_coding retained_intron MGP_WSBEiJ_T0056926.1 MGP_WSBEiJ_G0025821.1 mouse_genomes_project 2 143162572 143167098 - Esf1 protein_coding retained_intron MGP_WSBEiJ_T0056927.1 MGP_WSBEiJ_G0025821.1 mouse_genomes_project 2 143162607 143164555 - Esf1 protein_coding retained_intron MGP_WSBEiJ_T0056928.1 MGP_WSBEiJ_G0025821.1 mouse_genomes_project 2 143165978 143167098 - Esf1 protein_coding retained_intron MGP_WSBEiJ_T0013269.1 MGP_WSBEiJ_G0011399.1 mouse_genomes_project 2 81220959 81225167 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056945.1 MGP_WSBEiJ_G0025825.1 mouse_genomes_project 2 143693586 143714151 - Flrt3 protein_coding processed_transcript MGP_WSBEiJ_T0056946.1 MGP_WSBEiJ_G0025825.1 mouse_genomes_project 2 143700900 143714170 - MGP_WSBEiJ_P0056946 Flrt3 protein_coding protein_coding MGP_WSBEiJ_T0056947.1 MGP_WSBEiJ_G0025825.1 mouse_genomes_project 2 143702026 143714101 - MGP_WSBEiJ_P0056947 Flrt3 protein_coding protein_coding MGP_WSBEiJ_T0054560.1 MGP_WSBEiJ_G0025156.1 mouse_genomes_project 2 84197026 84264023 + MGP_WSBEiJ_P0054560 Fam171b protein_coding protein_coding MGP_WSBEiJ_T0054561.1 MGP_WSBEiJ_G0025156.1 mouse_genomes_project 2 84246885 84249263 + Fam171b protein_coding processed_transcript MGP_WSBEiJ_T0003922.1 MGP_WSBEiJ_G0003497.1 mouse_genomes_project 2 70181301 70187028 - Erich2os antisense antisense MGP_WSBEiJ_T0017191.1 MGP_WSBEiJ_G0014844.1 mouse_genomes_project 2 65858609 65871492 + Gm13630 processed_transcript processed_transcript MGP_WSBEiJ_T0058286.1 MGP_WSBEiJ_G0026150.1 mouse_genomes_project 2 171123438 171125298 + MGP_WSBEiJ_P0058286 protein_coding protein_coding MGP_WSBEiJ_T0058287.1 MGP_WSBEiJ_G0026150.1 mouse_genomes_project 2 171124676 171135592 + MGP_WSBEiJ_P0058287 protein_coding protein_coding MGP_WSBEiJ_T0058289.1 MGP_WSBEiJ_G0026150.1 mouse_genomes_project 2 171124908 171132002 + protein_coding processed_transcript MGP_WSBEiJ_T0100747.1 MGP_WSBEiJ_G0039205.1 mouse_genomes_project 2 160053404 160055671 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013159.1 MGP_WSBEiJ_G0011289.1 mouse_genomes_project 2 38026439 38026922 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057435.1 MGP_WSBEiJ_G0025968.1 mouse_genomes_project 2 158209007 158220313 - MGP_WSBEiJ_P0057435 E2f1 protein_coding protein_coding MGP_WSBEiJ_T0057436.1 MGP_WSBEiJ_G0025968.1 mouse_genomes_project 2 158209234 158220141 - MGP_WSBEiJ_P0057436 E2f1 protein_coding protein_coding MGP_WSBEiJ_T0056739.1 MGP_WSBEiJ_G0025781.1 mouse_genomes_project 2 133866246 133870394 + Ap5s1 protein_coding processed_transcript MGP_WSBEiJ_T0056740.1 MGP_WSBEiJ_G0025781.1 mouse_genomes_project 2 133866254 133871678 + MGP_WSBEiJ_P0056740 Ap5s1 protein_coding protein_coding MGP_WSBEiJ_T0056741.1 MGP_WSBEiJ_G0025781.1 mouse_genomes_project 2 133869315 133871944 + Ap5s1 protein_coding processed_transcript MGP_WSBEiJ_T0056742.1 MGP_WSBEiJ_G0025781.1 mouse_genomes_project 2 133869342 133871536 + Ap5s1 protein_coding processed_transcript MGP_WSBEiJ_T0056743.1 MGP_WSBEiJ_G0025781.1 mouse_genomes_project 2 133869369 133872453 + MGP_WSBEiJ_P0056743 Ap5s1 protein_coding protein_coding MGP_WSBEiJ_T0056744.1 MGP_WSBEiJ_G0025781.1 mouse_genomes_project 2 133869385 133872456 + MGP_WSBEiJ_P0056744 Ap5s1 protein_coding protein_coding MGP_WSBEiJ_T0056745.1 MGP_WSBEiJ_G0025781.1 mouse_genomes_project 2 133869385 133872456 + MGP_WSBEiJ_P0056745 Ap5s1 protein_coding protein_coding MGP_WSBEiJ_T0056746.1 MGP_WSBEiJ_G0025781.1 mouse_genomes_project 2 133869549 133871806 + MGP_WSBEiJ_P0056746 Ap5s1 protein_coding protein_coding MGP_WSBEiJ_T0007267.1 MGP_WSBEiJ_G0005961.1 mouse_genomes_project 2 165165170 165208067 + Gm14243 lincRNA lincRNA MGP_WSBEiJ_T0055055.1 MGP_WSBEiJ_G0025399.1 mouse_genomes_project 2 91945000 91973228 - Ddb2 protein_coding processed_transcript MGP_WSBEiJ_T0055056.1 MGP_WSBEiJ_G0025399.1 mouse_genomes_project 2 91945016 91974669 - Ddb2 protein_coding processed_transcript MGP_WSBEiJ_T0055057.1 MGP_WSBEiJ_G0025399.1 mouse_genomes_project 2 91945031 91974647 - MGP_WSBEiJ_P0055057 Ddb2 protein_coding protein_coding MGP_WSBEiJ_T0055058.1 MGP_WSBEiJ_G0025399.1 mouse_genomes_project 2 91945049 91974722 - Ddb2 protein_coding processed_transcript MGP_WSBEiJ_T0055059.1 MGP_WSBEiJ_G0025399.1 mouse_genomes_project 2 91945284 91974744 - MGP_WSBEiJ_P0055059 Ddb2 protein_coding protein_coding MGP_WSBEiJ_T0010281.1 MGP_WSBEiJ_G0008438.1 mouse_genomes_project 2 119090274 119090374 + Mir674 miRNA miRNA MGP_WSBEiJ_T0001048.1 MGP_WSBEiJ_G0000983.1 mouse_genomes_project 2 67446946 67451846 + TEC TEC MGP_WSBEiJ_T0007109.1 MGP_WSBEiJ_G0005833.1 mouse_genomes_project 2 65557219 65611267 + Gm28638 lincRNA lincRNA MGP_WSBEiJ_T0100686.1 MGP_WSBEiJ_G0039144.1 mouse_genomes_project 2 34756856 34757762 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007232.1 MGP_WSBEiJ_G0005932.1 mouse_genomes_project 2 140181192 140221947 + Gm14055 lincRNA lincRNA MGP_WSBEiJ_T0056211.1 MGP_WSBEiJ_G0025651.1 mouse_genomes_project 2 124050360 124123034 + MGP_WSBEiJ_P0056211 Casc4 protein_coding protein_coding MGP_WSBEiJ_T0056212.1 MGP_WSBEiJ_G0025651.1 mouse_genomes_project 2 124050360 124123034 + MGP_WSBEiJ_P0056212 Casc4 protein_coding protein_coding MGP_WSBEiJ_T0056213.1 MGP_WSBEiJ_G0025651.1 mouse_genomes_project 2 124050519 124085777 + Casc4 protein_coding retained_intron MGP_WSBEiJ_T0056214.1 MGP_WSBEiJ_G0025651.1 mouse_genomes_project 2 124050520 124091746 + Casc4 protein_coding retained_intron MGP_WSBEiJ_T0056215.1 MGP_WSBEiJ_G0025651.1 mouse_genomes_project 2 124050520 124122919 + MGP_WSBEiJ_P0056215 Casc4 protein_coding protein_coding MGP_WSBEiJ_T0056216.1 MGP_WSBEiJ_G0025651.1 mouse_genomes_project 2 124050520 124122881 + MGP_WSBEiJ_P0056216 Casc4 protein_coding protein_coding MGP_WSBEiJ_T0056217.1 MGP_WSBEiJ_G0025651.1 mouse_genomes_project 2 124051095 124120672 + Casc4 protein_coding processed_transcript MGP_WSBEiJ_T0056218.1 MGP_WSBEiJ_G0025651.1 mouse_genomes_project 2 124084373 124120637 + MGP_WSBEiJ_P0056218 Casc4 protein_coding protein_coding MGP_WSBEiJ_T0058076.1 MGP_WSBEiJ_G0026103.1 mouse_genomes_project 2 168622834 168627496 + MGP_WSBEiJ_P0058076 Dbndd2 protein_coding protein_coding MGP_WSBEiJ_T0058077.1 MGP_WSBEiJ_G0026103.1 mouse_genomes_project 2 168623183 168628004 + MGP_WSBEiJ_P0058077 Dbndd2 protein_coding protein_coding MGP_WSBEiJ_T0058078.1 MGP_WSBEiJ_G0026103.1 mouse_genomes_project 2 168623183 168627496 + MGP_WSBEiJ_P0058078 Dbndd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058079.1 MGP_WSBEiJ_G0026103.1 mouse_genomes_project 2 168623209 168626945 + MGP_WSBEiJ_P0058079 Dbndd2 protein_coding protein_coding MGP_WSBEiJ_T0058080.1 MGP_WSBEiJ_G0026103.1 mouse_genomes_project 2 168623605 168630074 + MGP_WSBEiJ_P0058080 Dbndd2 protein_coding protein_coding MGP_WSBEiJ_T0058081.1 MGP_WSBEiJ_G0026103.1 mouse_genomes_project 2 168624549 168627496 + MGP_WSBEiJ_P0058081 Dbndd2 protein_coding protein_coding MGP_WSBEiJ_T0004007.1 MGP_WSBEiJ_G0003554.1 mouse_genomes_project 2 134234901 134236467 + Gm14285 antisense antisense MGP_WSBEiJ_T0051691.1 MGP_WSBEiJ_G0024638.1 mouse_genomes_project 2 15599744 15612276 - MGP_WSBEiJ_P0051691 A930004D18Rik protein_coding protein_coding MGP_WSBEiJ_T0051692.1 MGP_WSBEiJ_G0024638.1 mouse_genomes_project 2 15602477 15603312 - A930004D18Rik protein_coding processed_transcript MGP_WSBEiJ_T0051693.1 MGP_WSBEiJ_G0024638.1 mouse_genomes_project 2 15602525 15603423 - A930004D18Rik protein_coding processed_transcript MGP_WSBEiJ_T0054348.1 MGP_WSBEiJ_G0025108.1 mouse_genomes_project 2 74537835 74544392 - MGP_WSBEiJ_P0054348 Evx2 protein_coding protein_coding MGP_WSBEiJ_T0054349.1 MGP_WSBEiJ_G0025108.1 mouse_genomes_project 2 74540452 74544254 - MGP_WSBEiJ_P0054349 Evx2 protein_coding protein_coding MGP_WSBEiJ_T0013111.1 MGP_WSBEiJ_G0011241.1 mouse_genomes_project 2 20338287 20338648 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099349.1 MGP_WSBEiJ_G0038012.1 mouse_genomes_project 2 41401884 41402017 + Gm24350 snoRNA snoRNA MGP_WSBEiJ_T0003928.1 MGP_WSBEiJ_G0003500.1 mouse_genomes_project 2 72044781 72049669 - Rapgef4os3 antisense antisense MGP_WSBEiJ_T0013434.1 MGP_WSBEiJ_G0011564.1 mouse_genomes_project 2 150137381 150137983 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100363.1 MGP_WSBEiJ_G0038836.1 mouse_genomes_project 2 147641052 147649545 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100364.1 MGP_WSBEiJ_G0038836.1 mouse_genomes_project 2 147646166 147682594 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100365.1 MGP_WSBEiJ_G0038836.1 mouse_genomes_project 2 147646231 147648497 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0100366.1 MGP_WSBEiJ_G0038836.1 mouse_genomes_project 2 147646947 147648504 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0058908.1 MGP_WSBEiJ_G0026286.1 mouse_genomes_project 2 187093619 187100122 + MGP_WSBEiJ_P0058908 Polr3k protein_coding protein_coding MGP_WSBEiJ_T0058909.1 MGP_WSBEiJ_G0026286.1 mouse_genomes_project 2 187093642 187095492 + Polr3k protein_coding retained_intron MGP_WSBEiJ_T0054155.1 MGP_WSBEiJ_G0025075.1 mouse_genomes_project 2 70151637 70154417 + MGP_WSBEiJ_P0054155 Sp5 protein_coding protein_coding MGP_WSBEiJ_T0013311.1 MGP_WSBEiJ_G0011441.1 mouse_genomes_project 2 94851250 94851830 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007105.1 MGP_WSBEiJ_G0005829.1 mouse_genomes_project 2 60180870 60194810 - Gm13582 lincRNA lincRNA MGP_WSBEiJ_T0097312.1 MGP_WSBEiJ_G0035987.1 mouse_genomes_project 2 1208254 1210532 + Gm38348 sense_intronic sense_intronic MGP_WSBEiJ_T0053762.1 MGP_WSBEiJ_G0025003.1 mouse_genomes_project 2 52205387 52233139 + Arl6ip6 protein_coding processed_transcript MGP_WSBEiJ_T0053763.1 MGP_WSBEiJ_G0025003.1 mouse_genomes_project 2 52205749 52234839 + MGP_WSBEiJ_P0053763 Arl6ip6 protein_coding protein_coding MGP_WSBEiJ_T0052862.1 MGP_WSBEiJ_G0024840.1 mouse_genomes_project 2 28964290 29015900 + MGP_WSBEiJ_P0052862 Prrx2 protein_coding protein_coding MGP_WSBEiJ_T0052863.1 MGP_WSBEiJ_G0024840.1 mouse_genomes_project 2 28976293 29015929 + MGP_WSBEiJ_P0052863 Prrx2 protein_coding protein_coding MGP_WSBEiJ_T0052864.1 MGP_WSBEiJ_G0024840.1 mouse_genomes_project 2 28976678 29013335 + Prrx2 protein_coding retained_intron MGP_WSBEiJ_T0052865.1 MGP_WSBEiJ_G0024840.1 mouse_genomes_project 2 29013996 29015798 + Prrx2 protein_coding retained_intron MGP_WSBEiJ_T0007312.1 MGP_WSBEiJ_G0006000.1 mouse_genomes_project 2 175954158 175959071 + 1700007M16Rik lincRNA lincRNA MGP_WSBEiJ_T0003994.1 MGP_WSBEiJ_G0003546.1 mouse_genomes_project 2 130192882 130201400 + Gm14244 antisense antisense MGP_WSBEiJ_T0001009.1 MGP_WSBEiJ_G0000944.1 mouse_genomes_project 2 10420882 10424834 + TEC TEC MGP_WSBEiJ_T0013242.1 MGP_WSBEiJ_G0011372.1 mouse_genomes_project 2 72350079 72350480 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099373.1 MGP_WSBEiJ_G0038036.1 mouse_genomes_project 2 105959631 105959763 + Gm22439 snoRNA snoRNA MGP_WSBEiJ_T0010285.1 MGP_WSBEiJ_G0008442.1 mouse_genomes_project 2 124913826 124913905 + Mir147 miRNA miRNA MGP_WSBEiJ_T0058788.1 MGP_WSBEiJ_G0026268.1 mouse_genomes_project 2 186574308 186590178 + MGP_WSBEiJ_P0058788 Zgpat protein_coding protein_coding MGP_WSBEiJ_T0058789.1 MGP_WSBEiJ_G0026268.1 mouse_genomes_project 2 186574794 186590166 + MGP_WSBEiJ_P0058789 Zgpat protein_coding protein_coding MGP_WSBEiJ_T0058790.1 MGP_WSBEiJ_G0026268.1 mouse_genomes_project 2 186574812 186593050 + MGP_WSBEiJ_P0058790 Zgpat protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058791.1 MGP_WSBEiJ_G0026268.1 mouse_genomes_project 2 186574841 186593048 + Zgpat protein_coding retained_intron MGP_WSBEiJ_T0058792.1 MGP_WSBEiJ_G0026268.1 mouse_genomes_project 2 186587777 186589203 + Zgpat protein_coding retained_intron MGP_WSBEiJ_T0058793.1 MGP_WSBEiJ_G0026268.1 mouse_genomes_project 2 186589022 186590122 + MGP_WSBEiJ_P0058793 Zgpat protein_coding protein_coding MGP_WSBEiJ_T0057965.1 MGP_WSBEiJ_G0026063.1 mouse_genomes_project 2 167037708 167063186 + MGP_WSBEiJ_P0057965 Sgk2 protein_coding protein_coding MGP_WSBEiJ_T0057966.1 MGP_WSBEiJ_G0026063.1 mouse_genomes_project 2 167037880 167063185 + MGP_WSBEiJ_P0057966 Sgk2 protein_coding protein_coding MGP_WSBEiJ_T0057967.1 MGP_WSBEiJ_G0026063.1 mouse_genomes_project 2 167048408 167057138 + Sgk2 protein_coding retained_intron MGP_WSBEiJ_T0053191.1 MGP_WSBEiJ_G0024890.1 mouse_genomes_project 2 31076520 31139596 - MGP_WSBEiJ_P0053191 Stxbp1 protein_coding protein_coding MGP_WSBEiJ_T0053192.1 MGP_WSBEiJ_G0024890.1 mouse_genomes_project 2 31076525 31109865 - Stxbp1 protein_coding processed_transcript MGP_WSBEiJ_T0053193.1 MGP_WSBEiJ_G0024890.1 mouse_genomes_project 2 31076879 31139553 - MGP_WSBEiJ_P0053193 Stxbp1 protein_coding protein_coding MGP_WSBEiJ_T0053194.1 MGP_WSBEiJ_G0024890.1 mouse_genomes_project 2 31109189 31110271 - Stxbp1 protein_coding retained_intron MGP_WSBEiJ_T0007296.1 MGP_WSBEiJ_G0005986.1 mouse_genomes_project 2 173508444 173509083 + 1700017J07Rik lincRNA lincRNA MGP_WSBEiJ_T0013489.1 MGP_WSBEiJ_G0011619.1 mouse_genomes_project 2 168812292 168812548 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098142.1 MGP_WSBEiJ_G0036805.1 mouse_genomes_project 2 186638436 186638539 - Gm22708 snRNA snRNA MGP_WSBEiJ_T0054769.1 MGP_WSBEiJ_G0025267.1 mouse_genomes_project 2 88012586 88013531 + MGP_WSBEiJ_P0054769 Olfr1120 protein_coding protein_coding MGP_WSBEiJ_T0098128.1 MGP_WSBEiJ_G0036791.1 mouse_genomes_project 2 136342331 136342438 - Gm25258 snRNA snRNA MGP_WSBEiJ_T0007123.1 MGP_WSBEiJ_G0005844.1 mouse_genomes_project 2 73776261 73785135 + Gm10822 lincRNA lincRNA MGP_WSBEiJ_T0004022.1 MGP_WSBEiJ_G0003563.1 mouse_genomes_project 2 139003912 139007046 + Gm14218 antisense antisense MGP_WSBEiJ_T0052098.1 MGP_WSBEiJ_G0024709.1 mouse_genomes_project 2 23153865 23159321 + MGP_WSBEiJ_P0052098 Entpd2 protein_coding protein_coding MGP_WSBEiJ_T0052099.1 MGP_WSBEiJ_G0024709.1 mouse_genomes_project 2 23153907 23159292 + Entpd2 protein_coding processed_transcript MGP_WSBEiJ_T0052100.1 MGP_WSBEiJ_G0024709.1 mouse_genomes_project 2 23156744 23157843 + Entpd2 protein_coding processed_transcript MGP_WSBEiJ_T0099389.1 MGP_WSBEiJ_G0038052.1 mouse_genomes_project 2 147436139 147436277 - Gm26165 snoRNA snoRNA MGP_WSBEiJ_T0001035.1 MGP_WSBEiJ_G0000970.1 mouse_genomes_project 2 34302358 34305351 + TEC TEC MGP_WSBEiJ_T0013385.1 MGP_WSBEiJ_G0011515.1 mouse_genomes_project 2 130095200 130104600 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011320.1 MGP_WSBEiJ_G0009477.1 mouse_genomes_project 2 160616077 160616323 + Gm27651 misc_RNA misc_RNA MGP_WSBEiJ_T0003858.1 MGP_WSBEiJ_G0003445.1 mouse_genomes_project 2 25059861 25105963 + Sardhos antisense antisense MGP_WSBEiJ_T0051462.1 MGP_WSBEiJ_G0024601.1 mouse_genomes_project 2 7163194 7169715 - 9230102O04Rik protein_coding processed_transcript MGP_WSBEiJ_T0051463.1 MGP_WSBEiJ_G0024601.1 mouse_genomes_project 2 7163195 7164148 - MGP_WSBEiJ_P0051463 9230102O04Rik protein_coding protein_coding MGP_WSBEiJ_T0007300.1 MGP_WSBEiJ_G0005989.1 mouse_genomes_project 2 173659051 173662984 + Gm14258 lincRNA lincRNA MGP_WSBEiJ_T0057457.1 MGP_WSBEiJ_G0025975.1 mouse_genomes_project 2 158472807 158732393 + MGP_WSBEiJ_P0057457 a protein_coding protein_coding MGP_WSBEiJ_T0057462.1 MGP_WSBEiJ_G0025975.1 mouse_genomes_project 2 158634988 158735677 + MGP_WSBEiJ_P0057462 a protein_coding protein_coding MGP_WSBEiJ_T0057463.1 MGP_WSBEiJ_G0025975.1 mouse_genomes_project 2 158709765 158735298 + MGP_WSBEiJ_P0057463 a protein_coding protein_coding MGP_WSBEiJ_T0057464.1 MGP_WSBEiJ_G0025975.1 mouse_genomes_project 2 158709824 158735678 + MGP_WSBEiJ_P0057464 a protein_coding protein_coding MGP_WSBEiJ_T0057465.1 MGP_WSBEiJ_G0025975.1 mouse_genomes_project 2 158732280 158735677 + a protein_coding retained_intron MGP_WSBEiJ_T0056629.1 MGP_WSBEiJ_G0025758.1 mouse_genomes_project 2 133040028 133047079 - Pced1a protein_coding processed_transcript MGP_WSBEiJ_T0056630.1 MGP_WSBEiJ_G0025758.1 mouse_genomes_project 2 133040464 133047109 - MGP_WSBEiJ_P0056630 Pced1a protein_coding protein_coding MGP_WSBEiJ_T0056631.1 MGP_WSBEiJ_G0025758.1 mouse_genomes_project 2 133041114 133047112 - Pced1a protein_coding processed_transcript MGP_WSBEiJ_T0056632.1 MGP_WSBEiJ_G0025758.1 mouse_genomes_project 2 133041138 133047097 - Pced1a protein_coding retained_intron MGP_WSBEiJ_T0056633.1 MGP_WSBEiJ_G0025758.1 mouse_genomes_project 2 133041867 133047518 - MGP_WSBEiJ_P0056633 Pced1a protein_coding protein_coding MGP_WSBEiJ_T0056634.1 MGP_WSBEiJ_G0025758.1 mouse_genomes_project 2 133041878 133047532 - Pced1a protein_coding retained_intron MGP_WSBEiJ_T0056635.1 MGP_WSBEiJ_G0025758.1 mouse_genomes_project 2 133044724 133047141 - Pced1a protein_coding retained_intron MGP_WSBEiJ_T0054816.1 MGP_WSBEiJ_G0025303.1 mouse_genomes_project 2 88778338 88779319 - MGP_WSBEiJ_P0054816 Olfr1164 protein_coding protein_coding MGP_WSBEiJ_T0054288.1 MGP_WSBEiJ_G0025100.1 mouse_genomes_project 2 73168395 73195379 + MGP_WSBEiJ_P0054288 Scrn3 protein_coding protein_coding MGP_WSBEiJ_T0054289.1 MGP_WSBEiJ_G0025100.1 mouse_genomes_project 2 73168448 73178072 + MGP_WSBEiJ_P0054289 Scrn3 protein_coding protein_coding MGP_WSBEiJ_T0054290.1 MGP_WSBEiJ_G0025100.1 mouse_genomes_project 2 73168453 73173076 + Scrn3 protein_coding processed_transcript MGP_WSBEiJ_T0054291.1 MGP_WSBEiJ_G0025100.1 mouse_genomes_project 2 73168453 73186806 + Scrn3 protein_coding processed_transcript MGP_WSBEiJ_T0054292.1 MGP_WSBEiJ_G0025100.1 mouse_genomes_project 2 73168470 73179298 + Scrn3 protein_coding processed_transcript MGP_WSBEiJ_T0054293.1 MGP_WSBEiJ_G0025100.1 mouse_genomes_project 2 73176670 73193309 + Scrn3 protein_coding processed_transcript MGP_WSBEiJ_T0054764.1 MGP_WSBEiJ_G0025262.1 mouse_genomes_project 2 87763136 87764075 - MGP_WSBEiJ_P0054764 Olfr1111 protein_coding protein_coding MGP_WSBEiJ_T0007298.1 MGP_WSBEiJ_G0005988.1 mouse_genomes_project 2 173562678 173564039 + Gm9873 lincRNA lincRNA MGP_WSBEiJ_T0007299.1 MGP_WSBEiJ_G0005988.1 mouse_genomes_project 2 173562923 173564020 + Gm9873 lincRNA lincRNA MGP_WSBEiJ_T0054690.1 MGP_WSBEiJ_G0025192.1 mouse_genomes_project 2 86083023 86085091 - MGP_WSBEiJ_P0054690 Olfr1000 protein_coding protein_coding MGP_WSBEiJ_T0011321.1 MGP_WSBEiJ_G0009478.1 mouse_genomes_project 2 162354483 162354569 + Gm24379 misc_RNA misc_RNA MGP_WSBEiJ_T0097037.1 MGP_WSBEiJ_G0035718.1 mouse_genomes_project 2 170977235 170977351 - Gm23152 rRNA rRNA MGP_WSBEiJ_T0053786.1 MGP_WSBEiJ_G0025010.1 mouse_genomes_project 2 57177599 57188274 - MGP_WSBEiJ_P0053786 Ermn protein_coding protein_coding MGP_WSBEiJ_T0055278.1 MGP_WSBEiJ_G0025434.1 mouse_genomes_project 2 94869273 94870510 - MGP_WSBEiJ_P0055278 protein_coding protein_coding MGP_WSBEiJ_T0055279.1 MGP_WSBEiJ_G0025434.1 mouse_genomes_project 2 94869279 94870662 - MGP_WSBEiJ_P0055279 protein_coding protein_coding MGP_WSBEiJ_T0054639.1 MGP_WSBEiJ_G0025175.1 mouse_genomes_project 2 85252940 85277692 + MGP_WSBEiJ_P0054639 Slc43a1 protein_coding protein_coding MGP_WSBEiJ_T0054640.1 MGP_WSBEiJ_G0025175.1 mouse_genomes_project 2 85253485 85264220 + MGP_WSBEiJ_P0054640 Slc43a1 protein_coding protein_coding MGP_WSBEiJ_T0054641.1 MGP_WSBEiJ_G0025175.1 mouse_genomes_project 2 85253498 85277700 + MGP_WSBEiJ_P0054641 Slc43a1 protein_coding protein_coding MGP_WSBEiJ_T0054642.1 MGP_WSBEiJ_G0025175.1 mouse_genomes_project 2 85253507 85276502 + Slc43a1 protein_coding retained_intron MGP_WSBEiJ_T0054643.1 MGP_WSBEiJ_G0025175.1 mouse_genomes_project 2 85254288 85277695 + MGP_WSBEiJ_P0054643 Slc43a1 protein_coding protein_coding MGP_WSBEiJ_T0054644.1 MGP_WSBEiJ_G0025175.1 mouse_genomes_project 2 85254714 85277708 + MGP_WSBEiJ_P0054644 Slc43a1 protein_coding protein_coding MGP_WSBEiJ_T0100711.1 MGP_WSBEiJ_G0039169.1 mouse_genomes_project 2 86993005 86993946 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007307.1 MGP_WSBEiJ_G0005995.1 mouse_genomes_project 2 174664107 174673495 - A630075F10Rik lincRNA lincRNA MGP_WSBEiJ_T0004005.1 MGP_WSBEiJ_G0003552.1 mouse_genomes_project 2 132157913 132158937 - Gm14041 antisense antisense MGP_WSBEiJ_T0007127.1 MGP_WSBEiJ_G0005848.1 mouse_genomes_project 2 74193321 74203043 - 4930441J16Rik lincRNA lincRNA MGP_WSBEiJ_T0010267.1 MGP_WSBEiJ_G0008424.1 mouse_genomes_project 2 93211877 93211940 - Mir7000 miRNA miRNA MGP_WSBEiJ_T0057483.1 MGP_WSBEiJ_G0025981.1 mouse_genomes_project 2 158958752 158981589 - Pigu protein_coding processed_transcript MGP_WSBEiJ_T0057484.1 MGP_WSBEiJ_G0025981.1 mouse_genomes_project 2 158958752 159038016 - MGP_WSBEiJ_P0057484 Pigu protein_coding protein_coding MGP_WSBEiJ_T0057485.1 MGP_WSBEiJ_G0025981.1 mouse_genomes_project 2 158958753 159038010 - MGP_WSBEiJ_P0057485 Pigu protein_coding protein_coding MGP_WSBEiJ_T0057486.1 MGP_WSBEiJ_G0025981.1 mouse_genomes_project 2 158981552 158984926 - Pigu protein_coding processed_transcript MGP_WSBEiJ_T0057487.1 MGP_WSBEiJ_G0025981.1 mouse_genomes_project 2 159012894 159038005 - Pigu protein_coding retained_intron MGP_WSBEiJ_T0056361.1 MGP_WSBEiJ_G0025692.1 mouse_genomes_project 2 128586043 128599035 + MGP_WSBEiJ_P0056361 Dtwd1 protein_coding protein_coding MGP_WSBEiJ_T0056362.1 MGP_WSBEiJ_G0025692.1 mouse_genomes_project 2 128588440 128599038 + MGP_WSBEiJ_P0056362 Dtwd1 protein_coding protein_coding MGP_WSBEiJ_T0054621.1 MGP_WSBEiJ_G0025168.1 mouse_genomes_project 2 85128670 85134889 - MGP_WSBEiJ_P0054621 Clp1 protein_coding protein_coding MGP_WSBEiJ_T0054622.1 MGP_WSBEiJ_G0025168.1 mouse_genomes_project 2 85130739 85134997 - MGP_WSBEiJ_P0054622 Clp1 protein_coding protein_coding MGP_WSBEiJ_T0054623.1 MGP_WSBEiJ_G0025168.1 mouse_genomes_project 2 85130741 85134923 - Clp1 protein_coding processed_transcript MGP_WSBEiJ_T0100731.1 MGP_WSBEiJ_G0039189.1 mouse_genomes_project 2 90907214 90908139 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0053652.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47700472 47747544 - MGP_WSBEiJ_P0053652 protein_coding protein_coding MGP_WSBEiJ_T0053653.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47702524 47707005 - protein_coding processed_transcript MGP_WSBEiJ_T0053654.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47702960 47747499 - protein_coding processed_transcript MGP_WSBEiJ_T0053655.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47703023 47707660 - protein_coding processed_transcript MGP_WSBEiJ_T0053656.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47703058 47709562 - protein_coding processed_transcript MGP_WSBEiJ_T0053657.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47708393 47747502 - protein_coding processed_transcript MGP_WSBEiJ_T0053658.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47714192 47748328 - MGP_WSBEiJ_P0053658 protein_coding protein_coding MGP_WSBEiJ_T0053659.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47729664 47747502 - MGP_WSBEiJ_P0053659 protein_coding protein_coding MGP_WSBEiJ_T0053660.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47734360 47747500 - protein_coding processed_transcript MGP_WSBEiJ_T0053661.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47734656 47747509 - MGP_WSBEiJ_P0053661 protein_coding protein_coding MGP_WSBEiJ_T0053662.1 MGP_WSBEiJ_G0024984.1 mouse_genomes_project 2 47734727 47748566 - MGP_WSBEiJ_P0053662 protein_coding protein_coding MGP_WSBEiJ_T0003901.1 MGP_WSBEiJ_G0003480.1 mouse_genomes_project 2 59521542 59555172 + Gm13571 antisense antisense MGP_WSBEiJ_T0003902.1 MGP_WSBEiJ_G0003480.1 mouse_genomes_project 2 59538683 59547787 + Gm13571 antisense antisense MGP_WSBEiJ_T0007045.1 MGP_WSBEiJ_G0005783.1 mouse_genomes_project 2 20382990 20391925 + 1700092C17Rik lincRNA lincRNA MGP_WSBEiJ_T0007046.1 MGP_WSBEiJ_G0005783.1 mouse_genomes_project 2 20391624 20391893 + 1700092C17Rik lincRNA lincRNA MGP_WSBEiJ_T0007293.1 MGP_WSBEiJ_G0005983.1 mouse_genomes_project 2 172599133 172606665 - Gm14235 lincRNA lincRNA MGP_WSBEiJ_T0057501.1 MGP_WSBEiJ_G0025984.1 mouse_genomes_project 2 159183044 159211211 - MGP_WSBEiJ_P0057501 Ggt7 protein_coding protein_coding MGP_WSBEiJ_T0057502.1 MGP_WSBEiJ_G0025984.1 mouse_genomes_project 2 159187626 159192058 - Ggt7 protein_coding retained_intron MGP_WSBEiJ_T0057503.1 MGP_WSBEiJ_G0025984.1 mouse_genomes_project 2 159188695 159196721 - Ggt7 protein_coding retained_intron MGP_WSBEiJ_T0057504.1 MGP_WSBEiJ_G0025984.1 mouse_genomes_project 2 159193658 159201586 - MGP_WSBEiJ_P0057504 Ggt7 protein_coding protein_coding MGP_WSBEiJ_T0057505.1 MGP_WSBEiJ_G0025984.1 mouse_genomes_project 2 159198349 159214536 - MGP_WSBEiJ_P0057505 Ggt7 protein_coding protein_coding MGP_WSBEiJ_T0054912.1 MGP_WSBEiJ_G0025376.1 mouse_genomes_project 2 90936499 90937426 - MGP_WSBEiJ_P0054912 Olfr32 protein_coding protein_coding MGP_WSBEiJ_T0013099.1 MGP_WSBEiJ_G0011229.1 mouse_genomes_project 2 15837567 15838046 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003947.1 MGP_WSBEiJ_G0003514.1 mouse_genomes_project 2 84075976 84076436 - Gm13686 antisense antisense MGP_WSBEiJ_T0055968.1 MGP_WSBEiJ_G0025616.1 mouse_genomes_project 2 122430233 122478988 - MGP_WSBEiJ_P0055968 Tmem87a protein_coding protein_coding MGP_WSBEiJ_T0055969.1 MGP_WSBEiJ_G0025616.1 mouse_genomes_project 2 122430233 122479008 - MGP_WSBEiJ_P0055969 Tmem87a protein_coding protein_coding MGP_WSBEiJ_T0055970.1 MGP_WSBEiJ_G0025616.1 mouse_genomes_project 2 122430237 122479014 - Tmem87a protein_coding processed_transcript MGP_WSBEiJ_T0055971.1 MGP_WSBEiJ_G0025616.1 mouse_genomes_project 2 122430872 122478996 - Tmem87a protein_coding processed_transcript MGP_WSBEiJ_T0055972.1 MGP_WSBEiJ_G0025616.1 mouse_genomes_project 2 122438159 122478997 - MGP_WSBEiJ_P0055972 Tmem87a protein_coding protein_coding MGP_WSBEiJ_T0055973.1 MGP_WSBEiJ_G0025616.1 mouse_genomes_project 2 122455662 122479032 - Tmem87a protein_coding processed_transcript MGP_WSBEiJ_T0055974.1 MGP_WSBEiJ_G0025616.1 mouse_genomes_project 2 122456176 122479000 - Tmem87a protein_coding retained_intron MGP_WSBEiJ_T0056177.1 MGP_WSBEiJ_G0025643.1 mouse_genomes_project 2 123541325 123547954 - MGP_WSBEiJ_P0056177 Ell3 protein_coding protein_coding MGP_WSBEiJ_T0056178.1 MGP_WSBEiJ_G0025643.1 mouse_genomes_project 2 123541342 123544918 - MGP_WSBEiJ_P0056178 Ell3 protein_coding protein_coding MGP_WSBEiJ_T0056180.1 MGP_WSBEiJ_G0025643.1 mouse_genomes_project 2 123542295 123543468 - Ell3 protein_coding retained_intron MGP_WSBEiJ_T0013225.1 MGP_WSBEiJ_G0011355.1 mouse_genomes_project 2 65579538 65579760 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017292.1 MGP_WSBEiJ_G0014898.1 mouse_genomes_project 2 154034630 154038658 + Gm14123 processed_transcript processed_transcript MGP_WSBEiJ_T0017281.1 MGP_WSBEiJ_G0014891.1 mouse_genomes_project 2 131879942 131891883 + Gm14023 processed_transcript processed_transcript MGP_WSBEiJ_T0010193.1 MGP_WSBEiJ_G0008350.1 mouse_genomes_project 2 7824076 7824178 + Gm22925 miRNA miRNA MGP_WSBEiJ_T0017153.1 MGP_WSBEiJ_G0014821.1 mouse_genomes_project 2 23566218 23577500 - Gm13538 processed_transcript processed_transcript MGP_WSBEiJ_T0057549.1 MGP_WSBEiJ_G0025993.1 mouse_genomes_project 2 159526404 159528092 - MGP_WSBEiJ_P0057549 BC029722 protein_coding protein_coding MGP_WSBEiJ_T0057403.1 MGP_WSBEiJ_G0025961.1 mouse_genomes_project 2 157867243 157879357 + MGP_WSBEiJ_P0057403 protein_coding protein_coding MGP_WSBEiJ_T0004093.1 MGP_WSBEiJ_G0003620.1 mouse_genomes_project 2 175160283 175178699 - Gm16796 antisense antisense MGP_WSBEiJ_T0058024.1 MGP_WSBEiJ_G0026081.1 mouse_genomes_project 2 168086968 168115353 + MGP_WSBEiJ_P0058024 Ywhab protein_coding unknown_likely_coding MGP_WSBEiJ_T0056532.1 MGP_WSBEiJ_G0025731.1 mouse_genomes_project 2 131418390 131453061 + MGP_WSBEiJ_P0056532 Fbln7 protein_coding protein_coding MGP_WSBEiJ_T0056533.1 MGP_WSBEiJ_G0025731.1 mouse_genomes_project 2 131419341 131453057 + MGP_WSBEiJ_P0056533 Fbln7 protein_coding protein_coding MGP_WSBEiJ_T0054697.1 MGP_WSBEiJ_G0025198.1 mouse_genomes_project 2 86242274 86245960 + MGP_WSBEiJ_P0054697 Olfr1013 protein_coding protein_coding MGP_WSBEiJ_T0013221.1 MGP_WSBEiJ_G0011351.1 mouse_genomes_project 2 63930015 63930793 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003914.1 MGP_WSBEiJ_G0003490.1 mouse_genomes_project 2 65886872 66011616 + Gm13629 antisense antisense MGP_WSBEiJ_T0054027.1 MGP_WSBEiJ_G0025047.1 mouse_genomes_project 2 65620958 65697774 - MGP_WSBEiJ_P0054027 Ttc21b protein_coding protein_coding MGP_WSBEiJ_T0054028.1 MGP_WSBEiJ_G0025047.1 mouse_genomes_project 2 65655631 65674978 - Ttc21b protein_coding retained_intron MGP_WSBEiJ_T0054029.1 MGP_WSBEiJ_G0025047.1 mouse_genomes_project 2 65669806 65690658 - Ttc21b protein_coding retained_intron MGP_WSBEiJ_T0054604.1 MGP_WSBEiJ_G0025163.1 mouse_genomes_project 2 85054749 85065345 + protein_coding processed_transcript MGP_WSBEiJ_T0054705.1 MGP_WSBEiJ_G0025206.1 mouse_genomes_project 2 86394532 86395516 - MGP_WSBEiJ_P0054705 Olfr1024 protein_coding protein_coding MGP_WSBEiJ_T0052442.1 MGP_WSBEiJ_G0024773.1 mouse_genomes_project 2 24889407 24895967 - Slc2a6 protein_coding processed_transcript MGP_WSBEiJ_T0052443.1 MGP_WSBEiJ_G0024773.1 mouse_genomes_project 2 24889407 24895991 - Slc2a6 protein_coding processed_transcript MGP_WSBEiJ_T0052444.1 MGP_WSBEiJ_G0024773.1 mouse_genomes_project 2 24889407 24895954 - MGP_WSBEiJ_P0052444 Slc2a6 protein_coding protein_coding MGP_WSBEiJ_T0052445.1 MGP_WSBEiJ_G0024773.1 mouse_genomes_project 2 24889407 24896043 - MGP_WSBEiJ_P0052445 Slc2a6 protein_coding protein_coding MGP_WSBEiJ_T0052446.1 MGP_WSBEiJ_G0024773.1 mouse_genomes_project 2 24892112 24894036 - Slc2a6 protein_coding processed_transcript MGP_WSBEiJ_T0052447.1 MGP_WSBEiJ_G0024773.1 mouse_genomes_project 2 24894132 24896036 - MGP_WSBEiJ_P0052447 Slc2a6 protein_coding protein_coding MGP_WSBEiJ_T0099397.1 MGP_WSBEiJ_G0038060.1 mouse_genomes_project 2 161540745 161540879 - Gm25407 snoRNA snoRNA MGP_WSBEiJ_T0055575.1 MGP_WSBEiJ_G0025495.1 mouse_genomes_project 2 111613474 111635425 + MGP_WSBEiJ_P0055575 Ccdc34 protein_coding protein_coding MGP_WSBEiJ_T0055576.1 MGP_WSBEiJ_G0025495.1 mouse_genomes_project 2 111613619 111750893 + MGP_WSBEiJ_P0055576 Ccdc34 protein_coding protein_coding MGP_WSBEiJ_T0055577.1 MGP_WSBEiJ_G0025495.1 mouse_genomes_project 2 111613637 111635431 + MGP_WSBEiJ_P0055577 Ccdc34 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055578.1 MGP_WSBEiJ_G0025495.1 mouse_genomes_project 2 111617635 111631372 + Ccdc34 protein_coding retained_intron MGP_WSBEiJ_T0055579.1 MGP_WSBEiJ_G0025495.1 mouse_genomes_project 2 111628132 111634958 + Ccdc34 protein_coding retained_intron MGP_WSBEiJ_T0055580.1 MGP_WSBEiJ_G0025495.1 mouse_genomes_project 2 111631003 111634773 + Ccdc34 protein_coding retained_intron MGP_WSBEiJ_T0017321.1 MGP_WSBEiJ_G0014911.1 mouse_genomes_project 2 170122188 170123539 + BC046401 processed_transcript processed_transcript MGP_WSBEiJ_T0013298.1 MGP_WSBEiJ_G0011428.1 mouse_genomes_project 2 88555831 88556043 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052382.1 MGP_WSBEiJ_G0024761.1 mouse_genomes_project 2 24533838 24537447 - MGP_WSBEiJ_P0052382 Lcn4 protein_coding protein_coding MGP_WSBEiJ_T0017208.1 MGP_WSBEiJ_G0014860.1 mouse_genomes_project 2 89536761 89540411 - Gm13760 processed_transcript processed_transcript MGP_WSBEiJ_T0017209.1 MGP_WSBEiJ_G0014860.1 mouse_genomes_project 2 89537071 89540883 - Gm13760 processed_transcript processed_transcript MGP_WSBEiJ_T0003988.1 MGP_WSBEiJ_G0003540.1 mouse_genomes_project 2 123392396 123394747 - Gm14978 antisense antisense MGP_WSBEiJ_T0000993.1 MGP_WSBEiJ_G0000928.1 mouse_genomes_project 2 7336624 7338298 + TEC TEC MGP_WSBEiJ_T0054794.1 MGP_WSBEiJ_G0025283.1 mouse_genomes_project 2 88429004 88429940 + MGP_WSBEiJ_P0054794 Olfr1140 protein_coding protein_coding MGP_WSBEiJ_T0013274.1 MGP_WSBEiJ_G0011404.1 mouse_genomes_project 2 83001893 83002233 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057437.1 MGP_WSBEiJ_G0025969.1 mouse_genomes_project 2 158236075 158257384 - MGP_WSBEiJ_P0057437 Pxmp4 protein_coding protein_coding MGP_WSBEiJ_T0057438.1 MGP_WSBEiJ_G0025969.1 mouse_genomes_project 2 158247012 158257364 - MGP_WSBEiJ_P0057438 Pxmp4 protein_coding protein_coding MGP_WSBEiJ_T0054193.1 MGP_WSBEiJ_G0025082.1 mouse_genomes_project 2 70754778 70782480 + MGP_WSBEiJ_P0054193 Dcaf17 protein_coding protein_coding MGP_WSBEiJ_T0054194.1 MGP_WSBEiJ_G0025082.1 mouse_genomes_project 2 70755194 70791736 + MGP_WSBEiJ_P0054194 Dcaf17 protein_coding protein_coding MGP_WSBEiJ_T0054195.1 MGP_WSBEiJ_G0025082.1 mouse_genomes_project 2 70755208 70774143 + MGP_WSBEiJ_P0054195 Dcaf17 protein_coding protein_coding MGP_WSBEiJ_T0054196.1 MGP_WSBEiJ_G0025082.1 mouse_genomes_project 2 70755231 70795019 + MGP_WSBEiJ_P0054196 Dcaf17 protein_coding protein_coding MGP_WSBEiJ_T0054197.1 MGP_WSBEiJ_G0025082.1 mouse_genomes_project 2 70755234 70779312 + MGP_WSBEiJ_P0054197 Dcaf17 protein_coding protein_coding MGP_WSBEiJ_T0054198.1 MGP_WSBEiJ_G0025082.1 mouse_genomes_project 2 70755296 70786152 + MGP_WSBEiJ_P0054198 Dcaf17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054199.1 MGP_WSBEiJ_G0025082.1 mouse_genomes_project 2 70755302 70784518 + MGP_WSBEiJ_P0054199 Dcaf17 protein_coding protein_coding MGP_WSBEiJ_T0054200.1 MGP_WSBEiJ_G0025082.1 mouse_genomes_project 2 70771316 70777913 + Dcaf17 protein_coding processed_transcript MGP_WSBEiJ_T0098082.1 MGP_WSBEiJ_G0036745.1 mouse_genomes_project 2 1383043 1383150 - Gm23691 snRNA snRNA MGP_WSBEiJ_T0056190.1 MGP_WSBEiJ_G0025646.1 mouse_genomes_project 2 123566252 123571854 + MGP_WSBEiJ_P0056190 Hypk protein_coding protein_coding MGP_WSBEiJ_T0056191.1 MGP_WSBEiJ_G0025646.1 mouse_genomes_project 2 123570039 123571780 + Hypk protein_coding retained_intron MGP_WSBEiJ_T0056192.1 MGP_WSBEiJ_G0025646.1 mouse_genomes_project 2 123570309 123572016 + MGP_WSBEiJ_P0056192 Hypk protein_coding protein_coding MGP_WSBEiJ_T0056193.1 MGP_WSBEiJ_G0025646.1 mouse_genomes_project 2 123570470 123571653 + Hypk protein_coding retained_intron MGP_WSBEiJ_T0056194.1 MGP_WSBEiJ_G0025646.1 mouse_genomes_project 2 123570480 123571707 + Hypk protein_coding processed_transcript MGP_WSBEiJ_T0055595.1 MGP_WSBEiJ_G0025501.1 mouse_genomes_project 2 112711300 112731993 - MGP_WSBEiJ_P0055595 Gm13941 protein_coding protein_coding MGP_WSBEiJ_T0055005.1 MGP_WSBEiJ_G0025394.1 mouse_genomes_project 2 91798207 91835450 + MGP_WSBEiJ_P0055005 Spi1 protein_coding protein_coding MGP_WSBEiJ_T0055006.1 MGP_WSBEiJ_G0025394.1 mouse_genomes_project 2 91798225 91806121 + Spi1 protein_coding processed_transcript MGP_WSBEiJ_T0055007.1 MGP_WSBEiJ_G0025394.1 mouse_genomes_project 2 91811902 91836834 + MGP_WSBEiJ_P0055007 Spi1 protein_coding protein_coding MGP_WSBEiJ_T0055008.1 MGP_WSBEiJ_G0025394.1 mouse_genomes_project 2 91812586 91834399 + MGP_WSBEiJ_P0055008 Spi1 protein_coding protein_coding MGP_WSBEiJ_T0010198.1 MGP_WSBEiJ_G0008355.1 mouse_genomes_project 2 7826075 7826173 + Mir669m-1 miRNA miRNA MGP_WSBEiJ_T0052505.1 MGP_WSBEiJ_G0024786.1 mouse_genomes_project 2 26395020 26398714 + Ppp1r26 protein_coding processed_transcript MGP_WSBEiJ_T0052506.1 MGP_WSBEiJ_G0024786.1 mouse_genomes_project 2 26395086 26399038 + Ppp1r26 protein_coding processed_transcript MGP_WSBEiJ_T0052507.1 MGP_WSBEiJ_G0024786.1 mouse_genomes_project 2 26396161 26398874 + Ppp1r26 protein_coding processed_transcript MGP_WSBEiJ_T0052508.1 MGP_WSBEiJ_G0024786.1 mouse_genomes_project 2 26396161 26403718 + MGP_WSBEiJ_P0052508 Ppp1r26 protein_coding protein_coding MGP_WSBEiJ_T0052509.1 MGP_WSBEiJ_G0024786.1 mouse_genomes_project 2 26396161 26403715 + MGP_WSBEiJ_P0052509 Ppp1r26 protein_coding protein_coding MGP_WSBEiJ_T0011297.1 MGP_WSBEiJ_G0009454.1 mouse_genomes_project 2 43811352 43811413 + Gm27676 misc_RNA misc_RNA MGP_WSBEiJ_T0013390.1 MGP_WSBEiJ_G0011520.1 mouse_genomes_project 2 131510963 131511442 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007067.1 MGP_WSBEiJ_G0005798.1 mouse_genomes_project 2 30792295 30795229 + Gm13412 lincRNA lincRNA MGP_WSBEiJ_T0013364.1 MGP_WSBEiJ_G0011494.1 mouse_genomes_project 2 114099467 114099768 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055634.1 MGP_WSBEiJ_G0025536.1 mouse_genomes_project 2 113957527 113970110 - MGP_WSBEiJ_P0055634 Nutm1 protein_coding protein_coding MGP_WSBEiJ_T0013223.1 MGP_WSBEiJ_G0011353.1 mouse_genomes_project 2 64665302 64666311 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058869.1 MGP_WSBEiJ_G0026281.1 mouse_genomes_project 2 186919941 186925509 - MGP_WSBEiJ_P0058869 Rgs19 protein_coding protein_coding MGP_WSBEiJ_T0058870.1 MGP_WSBEiJ_G0026281.1 mouse_genomes_project 2 186919947 186921010 - MGP_WSBEiJ_P0058870 Rgs19 protein_coding protein_coding MGP_WSBEiJ_T0058871.1 MGP_WSBEiJ_G0026281.1 mouse_genomes_project 2 186919950 186925389 - MGP_WSBEiJ_P0058871 Rgs19 protein_coding protein_coding MGP_WSBEiJ_T0058872.1 MGP_WSBEiJ_G0026281.1 mouse_genomes_project 2 186920032 186923286 - MGP_WSBEiJ_P0058872 Rgs19 protein_coding protein_coding MGP_WSBEiJ_T0058873.1 MGP_WSBEiJ_G0026281.1 mouse_genomes_project 2 186920035 186925399 - MGP_WSBEiJ_P0058873 Rgs19 protein_coding protein_coding MGP_WSBEiJ_T0058874.1 MGP_WSBEiJ_G0026281.1 mouse_genomes_project 2 186920844 186925100 - Rgs19 protein_coding processed_transcript MGP_WSBEiJ_T0058875.1 MGP_WSBEiJ_G0026281.1 mouse_genomes_project 2 186920929 186925418 - Rgs19 protein_coding processed_transcript MGP_WSBEiJ_T0058876.1 MGP_WSBEiJ_G0026281.1 mouse_genomes_project 2 186921171 186925376 - Rgs19 protein_coding processed_transcript MGP_WSBEiJ_T0055436.1 MGP_WSBEiJ_G0025463.1 mouse_genomes_project 2 105345397 105383946 + MGP_WSBEiJ_P0055436 Fbxo3 protein_coding protein_coding MGP_WSBEiJ_T0055437.1 MGP_WSBEiJ_G0025463.1 mouse_genomes_project 2 105345499 105376721 + MGP_WSBEiJ_P0055437 Fbxo3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055438.1 MGP_WSBEiJ_G0025463.1 mouse_genomes_project 2 105345514 105378229 + MGP_WSBEiJ_P0055438 Fbxo3 protein_coding protein_coding MGP_WSBEiJ_T0055439.1 MGP_WSBEiJ_G0025463.1 mouse_genomes_project 2 105345516 105383709 + MGP_WSBEiJ_P0055439 Fbxo3 protein_coding protein_coding MGP_WSBEiJ_T0055440.1 MGP_WSBEiJ_G0025463.1 mouse_genomes_project 2 105345518 105378196 + Fbxo3 protein_coding processed_transcript MGP_WSBEiJ_T0055441.1 MGP_WSBEiJ_G0025463.1 mouse_genomes_project 2 105345530 105378210 + MGP_WSBEiJ_P0055441 Fbxo3 protein_coding protein_coding MGP_WSBEiJ_T0003881.1 MGP_WSBEiJ_G0003465.1 mouse_genomes_project 2 32142785 32150584 + Nron antisense antisense MGP_WSBEiJ_T0003882.1 MGP_WSBEiJ_G0003465.1 mouse_genomes_project 2 32142797 32149448 + Nron antisense antisense MGP_WSBEiJ_T0003883.1 MGP_WSBEiJ_G0003465.1 mouse_genomes_project 2 32142828 32148431 + Nron antisense antisense MGP_WSBEiJ_T0007088.1 MGP_WSBEiJ_G0005814.1 mouse_genomes_project 2 44487399 44492311 - Gm13467 lincRNA lincRNA MGP_WSBEiJ_T0051280.1 MGP_WSBEiJ_G0024572.1 mouse_genomes_project 2 309742 336592 - MGP_WSBEiJ_P0051280 Olah protein_coding protein_coding MGP_WSBEiJ_T0051281.1 MGP_WSBEiJ_G0024572.1 mouse_genomes_project 2 309747 336601 - MGP_WSBEiJ_P0051281 Olah protein_coding protein_coding MGP_WSBEiJ_T0051282.1 MGP_WSBEiJ_G0024572.1 mouse_genomes_project 2 309777 336570 - MGP_WSBEiJ_P0051282 Olah protein_coding protein_coding MGP_WSBEiJ_T0053458.1 MGP_WSBEiJ_G0024943.1 mouse_genomes_project 2 35333605 35334541 - MGP_WSBEiJ_P0053458 Olfr353 protein_coding protein_coding MGP_WSBEiJ_T0057815.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380559 161385702 + MGP_WSBEiJ_P0057815 Nnat protein_coding protein_coding MGP_WSBEiJ_T0057816.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380588 161385436 + MGP_WSBEiJ_P0057816 Nnat protein_coding protein_coding MGP_WSBEiJ_T0057817.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380591 161385720 + MGP_WSBEiJ_P0057817 Nnat protein_coding protein_coding MGP_WSBEiJ_T0057818.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380597 161385702 + MGP_WSBEiJ_P0057818 Nnat protein_coding protein_coding MGP_WSBEiJ_T0057819.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380602 161385190 + MGP_WSBEiJ_P0057819 Nnat protein_coding protein_coding MGP_WSBEiJ_T0057820.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380604 161384570 + MGP_WSBEiJ_P0057820 Nnat protein_coding protein_coding MGP_WSBEiJ_T0057821.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380605 161384980 + MGP_WSBEiJ_P0057821 Nnat protein_coding protein_coding MGP_WSBEiJ_T0057822.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380611 161384978 + MGP_WSBEiJ_P0057822 Nnat protein_coding protein_coding MGP_WSBEiJ_T0057823.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161380621 161385715 + Nnat protein_coding retained_intron MGP_WSBEiJ_T0057824.1 MGP_WSBEiJ_G0026033.1 mouse_genomes_project 2 161384206 161385053 + Nnat protein_coding retained_intron MGP_WSBEiJ_T0051753.1 MGP_WSBEiJ_G0024649.1 mouse_genomes_project 2 17067067 17068906 + MGP_WSBEiJ_P0051753 Ptf1a protein_coding protein_coding MGP_WSBEiJ_T0007181.1 MGP_WSBEiJ_G0005891.1 mouse_genomes_project 2 108033351 108039401 - Gm14014 lincRNA lincRNA MGP_WSBEiJ_T0052586.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27182205 27245154 - MGP_WSBEiJ_P0052586 Ntng2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052587.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27182458 27245128 - MGP_WSBEiJ_P0052587 Ntng2 protein_coding protein_coding MGP_WSBEiJ_T0052588.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27182485 27245069 - MGP_WSBEiJ_P0052588 Ntng2 protein_coding protein_coding MGP_WSBEiJ_T0052589.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27182485 27245069 - MGP_WSBEiJ_P0052589 Ntng2 protein_coding protein_coding MGP_WSBEiJ_T0052590.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27182485 27245069 - MGP_WSBEiJ_P0052590 Ntng2 protein_coding protein_coding MGP_WSBEiJ_T0052591.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27186128 27194893 - Ntng2 protein_coding processed_transcript MGP_WSBEiJ_T0052592.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27186301 27195791 - Ntng2 protein_coding processed_transcript MGP_WSBEiJ_T0052593.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27191430 27194893 - Ntng2 protein_coding processed_transcript MGP_WSBEiJ_T0052594.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27191544 27195791 - Ntng2 protein_coding processed_transcript MGP_WSBEiJ_T0052595.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27194690 27250033 - MGP_WSBEiJ_P0052595 Ntng2 protein_coding protein_coding MGP_WSBEiJ_T0052596.1 MGP_WSBEiJ_G0024804.1 mouse_genomes_project 2 27224792 27245161 - Ntng2 protein_coding processed_transcript MGP_WSBEiJ_T0011317.1 MGP_WSBEiJ_G0009474.1 mouse_genomes_project 2 150508944 150509268 - Gm22261 misc_RNA misc_RNA MGP_WSBEiJ_T0057099.1 MGP_WSBEiJ_G0025863.1 mouse_genomes_project 2 151984128 151988146 + MGP_WSBEiJ_P0057099 Nxt1 protein_coding protein_coding MGP_WSBEiJ_T0057100.1 MGP_WSBEiJ_G0025863.1 mouse_genomes_project 2 151984153 151988146 + MGP_WSBEiJ_P0057100 Nxt1 protein_coding protein_coding MGP_WSBEiJ_T0051804.1 MGP_WSBEiJ_G0024656.1 mouse_genomes_project 2 19037680 19492148 + MGP_WSBEiJ_P0051804 Gpr158 protein_coding protein_coding MGP_WSBEiJ_T0051805.1 MGP_WSBEiJ_G0024656.1 mouse_genomes_project 2 19037705 19474194 + Gpr158 protein_coding retained_intron MGP_WSBEiJ_T0017201.1 MGP_WSBEiJ_G0014853.1 mouse_genomes_project 2 77927837 77948010 - processed_transcript processed_transcript MGP_WSBEiJ_T0057219.1 MGP_WSBEiJ_G0025900.1 mouse_genomes_project 2 155585889 155590984 + Srxn1 protein_coding processed_transcript MGP_WSBEiJ_T0057220.1 MGP_WSBEiJ_G0025900.1 mouse_genomes_project 2 155585889 155590873 + Srxn1 protein_coding processed_transcript MGP_WSBEiJ_T0057221.1 MGP_WSBEiJ_G0025900.1 mouse_genomes_project 2 155585897 155593038 + MGP_WSBEiJ_P0057221 Srxn1 protein_coding protein_coding MGP_WSBEiJ_T0099410.1 MGP_WSBEiJ_G0038073.1 mouse_genomes_project 2 172804527 172804664 + Gm22704 snoRNA snoRNA MGP_WSBEiJ_T0057968.1 MGP_WSBEiJ_G0026064.1 mouse_genomes_project 2 167067517 167098055 + MGP_WSBEiJ_P0057968 Ift52 protein_coding protein_coding MGP_WSBEiJ_T0057969.1 MGP_WSBEiJ_G0026064.1 mouse_genomes_project 2 167067654 167083743 + MGP_WSBEiJ_P0057969 Ift52 protein_coding protein_coding MGP_WSBEiJ_T0057970.1 MGP_WSBEiJ_G0026064.1 mouse_genomes_project 2 167067682 167074547 + Ift52 protein_coding processed_transcript MGP_WSBEiJ_T0057971.1 MGP_WSBEiJ_G0026064.1 mouse_genomes_project 2 167073448 167080900 + Ift52 protein_coding processed_transcript MGP_WSBEiJ_T0010218.1 MGP_WSBEiJ_G0008375.1 mouse_genomes_project 2 22791723 22791786 + Mir7664 miRNA miRNA MGP_WSBEiJ_T0057256.1 MGP_WSBEiJ_G0025915.1 mouse_genomes_project 2 156033317 156034702 - MGP_WSBEiJ_P0057256 Defb29 protein_coding protein_coding MGP_WSBEiJ_T0053964.1 MGP_WSBEiJ_G0025037.1 mouse_genomes_project 2 61973391 62005446 + MGP_WSBEiJ_P0053964 Gca protein_coding protein_coding MGP_WSBEiJ_T0053965.1 MGP_WSBEiJ_G0025037.1 mouse_genomes_project 2 61997422 62002036 + Gca protein_coding processed_transcript MGP_WSBEiJ_T0007058.1 MGP_WSBEiJ_G0005792.1 mouse_genomes_project 2 26014743 26016226 - Gm13371 lincRNA lincRNA MGP_WSBEiJ_T0007255.1 MGP_WSBEiJ_G0005951.1 mouse_genomes_project 2 160179131 160181728 - Gm14225 lincRNA lincRNA MGP_WSBEiJ_T0010273.1 MGP_WSBEiJ_G0008430.1 mouse_genomes_project 2 95159475 95159540 + Mir129b miRNA miRNA MGP_WSBEiJ_T0056292.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 126470502 126525117 + Sema6d protein_coding retained_intron MGP_WSBEiJ_T0056293.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 126470502 127064032 + MGP_WSBEiJ_P0056293 Sema6d protein_coding protein_coding MGP_WSBEiJ_T0056294.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 126524743 126899100 + Sema6d protein_coding processed_transcript MGP_WSBEiJ_T0056295.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 127006166 127058635 + Sema6d protein_coding retained_intron MGP_WSBEiJ_T0056296.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 127006356 127064032 + MGP_WSBEiJ_P0056296 Sema6d protein_coding protein_coding MGP_WSBEiJ_T0056297.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 127006356 127064032 + MGP_WSBEiJ_P0056297 Sema6d protein_coding protein_coding MGP_WSBEiJ_T0056298.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 127006356 127064032 + MGP_WSBEiJ_P0056298 Sema6d protein_coding protein_coding MGP_WSBEiJ_T0056299.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 127006356 127061707 + MGP_WSBEiJ_P0056299 Sema6d protein_coding protein_coding MGP_WSBEiJ_T0056300.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 127006661 127061707 + MGP_WSBEiJ_P0056300 Sema6d protein_coding protein_coding MGP_WSBEiJ_T0056301.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 127049165 127061063 + MGP_WSBEiJ_P0056301 Sema6d protein_coding unknown_likely_coding MGP_WSBEiJ_T0056302.1 MGP_WSBEiJ_G0025675.1 mouse_genomes_project 2 127049389 127061063 + MGP_WSBEiJ_P0056302 Sema6d protein_coding protein_coding MGP_WSBEiJ_T0054790.1 MGP_WSBEiJ_G0025279.1 mouse_genomes_project 2 88350699 88351718 + MGP_WSBEiJ_P0054790 Olfr1131 protein_coding protein_coding MGP_WSBEiJ_T0058174.1 MGP_WSBEiJ_G0026133.1 mouse_genomes_project 2 169153673 169199400 + MGP_WSBEiJ_P0058174 Slc12a5 protein_coding protein_coding MGP_WSBEiJ_T0058175.1 MGP_WSBEiJ_G0026133.1 mouse_genomes_project 2 169153695 169201549 + MGP_WSBEiJ_P0058175 Slc12a5 protein_coding protein_coding MGP_WSBEiJ_T0058176.1 MGP_WSBEiJ_G0026133.1 mouse_genomes_project 2 169161967 169201558 + MGP_WSBEiJ_P0058176 Slc12a5 protein_coding protein_coding MGP_WSBEiJ_T0058177.1 MGP_WSBEiJ_G0026133.1 mouse_genomes_project 2 169162223 169201554 + MGP_WSBEiJ_P0058177 Slc12a5 protein_coding protein_coding MGP_WSBEiJ_T0058178.1 MGP_WSBEiJ_G0026133.1 mouse_genomes_project 2 169162265 169187449 + MGP_WSBEiJ_P0058178 Slc12a5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058179.1 MGP_WSBEiJ_G0026133.1 mouse_genomes_project 2 169179284 169183788 + Slc12a5 protein_coding retained_intron MGP_WSBEiJ_T0058180.1 MGP_WSBEiJ_G0026133.1 mouse_genomes_project 2 169198421 169201549 + Slc12a5 protein_coding retained_intron MGP_WSBEiJ_T0056245.1 MGP_WSBEiJ_G0025664.1 mouse_genomes_project 2 124519697 124523668 + MGP_WSBEiJ_P0056245 Duoxa2 protein_coding protein_coding MGP_WSBEiJ_T0099383.1 MGP_WSBEiJ_G0038046.1 mouse_genomes_project 2 132888904 132888972 + Snord110 snoRNA snoRNA MGP_WSBEiJ_T0054825.1 MGP_WSBEiJ_G0025312.1 mouse_genomes_project 2 89265377 89265764 - MGP_WSBEiJ_P0054825 Olfr1187-ps1 protein_coding protein_coding MGP_WSBEiJ_T0054826.1 MGP_WSBEiJ_G0025312.1 mouse_genomes_project 2 89265380 89265683 - MGP_WSBEiJ_P0054826 Olfr1187-ps1 protein_coding protein_coding MGP_WSBEiJ_T0007069.1 MGP_WSBEiJ_G0005800.1 mouse_genomes_project 2 32049727 32052256 - 9430024E24Rik lincRNA lincRNA MGP_WSBEiJ_T0004067.1 MGP_WSBEiJ_G0003602.1 mouse_genomes_project 2 167552104 167553152 + 2310001K24Rik antisense antisense MGP_WSBEiJ_T0004068.1 MGP_WSBEiJ_G0003602.1 mouse_genomes_project 2 167552692 167553150 + 2310001K24Rik antisense antisense MGP_WSBEiJ_T0056932.1 MGP_WSBEiJ_G0025823.1 mouse_genomes_project 2 143242619 143420829 - MGP_WSBEiJ_P0056932 Sel1l2 protein_coding protein_coding MGP_WSBEiJ_T0056933.1 MGP_WSBEiJ_G0025823.1 mouse_genomes_project 2 143310392 143313205 - Sel1l2 protein_coding processed_transcript MGP_WSBEiJ_T0056934.1 MGP_WSBEiJ_G0025823.1 mouse_genomes_project 2 143310397 143420831 - MGP_WSBEiJ_P0056934 Sel1l2 protein_coding protein_coding MGP_WSBEiJ_T0056219.1 MGP_WSBEiJ_G0025652.1 mouse_genomes_project 2 124141081 124145263 - MGP_WSBEiJ_P0056219 protein_coding protein_coding MGP_WSBEiJ_T0054916.1 MGP_WSBEiJ_G0025380.1 mouse_genomes_project 2 91065072 91068057 + MGP_WSBEiJ_P0054916 protein_coding protein_coding MGP_WSBEiJ_T0054918.1 MGP_WSBEiJ_G0025380.1 mouse_genomes_project 2 91065140 91068043 + MGP_WSBEiJ_P0054918 protein_coding protein_coding MGP_WSBEiJ_T0013203.1 MGP_WSBEiJ_G0011333.1 mouse_genomes_project 2 56546209 56546752 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054493.1 MGP_WSBEiJ_G0025141.1 mouse_genomes_project 2 79719575 79723806 - MGP_WSBEiJ_P0054493 Neurod1 protein_coding protein_coding MGP_WSBEiJ_T0007284.1 MGP_WSBEiJ_G0005977.1 mouse_genomes_project 2 171450419 171453450 - lincRNA lincRNA MGP_WSBEiJ_T0007285.1 MGP_WSBEiJ_G0005977.1 mouse_genomes_project 2 171451310 171452796 - lincRNA lincRNA MGP_WSBEiJ_T0055823.1 MGP_WSBEiJ_G0025583.1 mouse_genomes_project 2 121134313 121155628 - MGP_WSBEiJ_P0055823 Rmdn3 protein_coding protein_coding MGP_WSBEiJ_T0055824.1 MGP_WSBEiJ_G0025583.1 mouse_genomes_project 2 121136367 121138188 - Rmdn3 protein_coding retained_intron MGP_WSBEiJ_T0055825.1 MGP_WSBEiJ_G0025583.1 mouse_genomes_project 2 121139730 121146037 - Rmdn3 protein_coding retained_intron MGP_WSBEiJ_T0055826.1 MGP_WSBEiJ_G0025583.1 mouse_genomes_project 2 121144755 121146046 - Rmdn3 protein_coding retained_intron MGP_WSBEiJ_T0055827.1 MGP_WSBEiJ_G0025583.1 mouse_genomes_project 2 121152625 121155418 - MGP_WSBEiJ_P0055827 Rmdn3 protein_coding protein_coding MGP_WSBEiJ_T0055828.1 MGP_WSBEiJ_G0025583.1 mouse_genomes_project 2 121152655 121155542 - MGP_WSBEiJ_P0055828 Rmdn3 protein_coding protein_coding MGP_WSBEiJ_T0055829.1 MGP_WSBEiJ_G0025583.1 mouse_genomes_project 2 121152665 121155558 - MGP_WSBEiJ_P0055829 Rmdn3 protein_coding protein_coding MGP_WSBEiJ_T0003885.1 MGP_WSBEiJ_G0003467.1 mouse_genomes_project 2 33386354 33406970 + Gm13449 antisense antisense MGP_WSBEiJ_T0013126.1 MGP_WSBEiJ_G0011256.1 mouse_genomes_project 2 24405740 24406310 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054708.1 MGP_WSBEiJ_G0025208.1 mouse_genomes_project 2 86415704 86416628 + MGP_WSBEiJ_P0054708 Olfr1026 protein_coding protein_coding MGP_WSBEiJ_T0051623.1 MGP_WSBEiJ_G0024624.1 mouse_genomes_project 2 11059463 11214621 - MGP_WSBEiJ_P0051623 St8sia6 protein_coding protein_coding MGP_WSBEiJ_T0051624.1 MGP_WSBEiJ_G0024624.1 mouse_genomes_project 2 11065596 11213850 - St8sia6 protein_coding processed_transcript MGP_WSBEiJ_T0007234.1 MGP_WSBEiJ_G0005934.1 mouse_genomes_project 2 140784420 140791208 - Gm14062 lincRNA lincRNA MGP_WSBEiJ_T0011306.1 MGP_WSBEiJ_G0009463.1 mouse_genomes_project 2 106522664 106522924 - Gm27715 misc_RNA misc_RNA MGP_WSBEiJ_T0001003.1 MGP_WSBEiJ_G0000938.1 mouse_genomes_project 2 9734727 9736130 - TEC TEC MGP_WSBEiJ_T0097499.1 MGP_WSBEiJ_G0036164.1 mouse_genomes_project 2 186185908 186189260 + 9230112E08Rik sense_overlapping sense_overlapping MGP_WSBEiJ_T0097500.1 MGP_WSBEiJ_G0036164.1 mouse_genomes_project 2 186186216 186187576 + 9230112E08Rik sense_overlapping sense_overlapping MGP_WSBEiJ_T0055604.1 MGP_WSBEiJ_G0025509.1 mouse_genomes_project 2 112975454 113130703 + MGP_WSBEiJ_P0055604 protein_coding protein_coding MGP_WSBEiJ_T0053701.1 MGP_WSBEiJ_G0024991.1 mouse_genomes_project 2 50018184 50036875 - MGP_WSBEiJ_P0053701 Rnd3 protein_coding protein_coding MGP_WSBEiJ_T0053702.1 MGP_WSBEiJ_G0024991.1 mouse_genomes_project 2 50019569 50036874 - MGP_WSBEiJ_P0053702 Rnd3 protein_coding protein_coding MGP_WSBEiJ_T0053703.1 MGP_WSBEiJ_G0024991.1 mouse_genomes_project 2 50024826 50036858 - Rnd3 protein_coding retained_intron MGP_WSBEiJ_T0003890.1 MGP_WSBEiJ_G0003472.1 mouse_genomes_project 2 37188183 37196106 + Nr5a1os antisense antisense MGP_WSBEiJ_T0013439.1 MGP_WSBEiJ_G0011569.1 mouse_genomes_project 2 150917339 150917669 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054864.1 MGP_WSBEiJ_G0025346.1 mouse_genomes_project 2 90150212 90151148 - MGP_WSBEiJ_P0054864 Olfr1232 protein_coding protein_coding MGP_WSBEiJ_T0055221.1 MGP_WSBEiJ_G0025426.1 mouse_genomes_project 2 94059213 94075208 + MGP_WSBEiJ_P0055221 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055222.1 MGP_WSBEiJ_G0025426.1 mouse_genomes_project 2 94059316 94074213 + MGP_WSBEiJ_P0055222 protein_coding protein_coding MGP_WSBEiJ_T0055223.1 MGP_WSBEiJ_G0025426.1 mouse_genomes_project 2 94059329 94074743 + protein_coding processed_transcript MGP_WSBEiJ_T0055224.1 MGP_WSBEiJ_G0025426.1 mouse_genomes_project 2 94059329 94075597 + protein_coding processed_transcript MGP_WSBEiJ_T0055225.1 MGP_WSBEiJ_G0025426.1 mouse_genomes_project 2 94059438 94061331 + protein_coding processed_transcript MGP_WSBEiJ_T0055226.1 MGP_WSBEiJ_G0025426.1 mouse_genomes_project 2 94060959 94077042 + protein_coding processed_transcript MGP_WSBEiJ_T0055227.1 MGP_WSBEiJ_G0025426.1 mouse_genomes_project 2 94074212 94075883 + protein_coding processed_transcript MGP_WSBEiJ_T0055117.1 MGP_WSBEiJ_G0025408.1 mouse_genomes_project 2 92436623 92475847 - MGP_WSBEiJ_P0055117 Atg13 protein_coding protein_coding MGP_WSBEiJ_T0055118.1 MGP_WSBEiJ_G0025408.1 mouse_genomes_project 2 92436624 92475790 - MGP_WSBEiJ_P0055118 Atg13 protein_coding protein_coding MGP_WSBEiJ_T0055119.1 MGP_WSBEiJ_G0025408.1 mouse_genomes_project 2 92438288 92441725 - Atg13 protein_coding processed_transcript MGP_WSBEiJ_T0055120.1 MGP_WSBEiJ_G0025408.1 mouse_genomes_project 2 92438323 92445770 - Atg13 protein_coding processed_transcript MGP_WSBEiJ_T0055121.1 MGP_WSBEiJ_G0025408.1 mouse_genomes_project 2 92438391 92459940 - MGP_WSBEiJ_P0055121 Atg13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055122.1 MGP_WSBEiJ_G0025408.1 mouse_genomes_project 2 92441410 92448793 - Atg13 protein_coding processed_transcript MGP_WSBEiJ_T0055123.1 MGP_WSBEiJ_G0025408.1 mouse_genomes_project 2 92452751 92471077 - Atg13 protein_coding processed_transcript MGP_WSBEiJ_T0099377.1 MGP_WSBEiJ_G0038040.1 mouse_genomes_project 2 121785223 121785352 - Gm25857 snoRNA snoRNA MGP_WSBEiJ_T0052468.1 MGP_WSBEiJ_G0024779.1 mouse_genomes_project 2 25133974 25304836 - MGP_WSBEiJ_P0052468 Vav2 protein_coding protein_coding MGP_WSBEiJ_T0052469.1 MGP_WSBEiJ_G0024779.1 mouse_genomes_project 2 25133974 25304715 - MGP_WSBEiJ_P0052469 Vav2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052470.1 MGP_WSBEiJ_G0024779.1 mouse_genomes_project 2 25140325 25148896 - Vav2 protein_coding processed_transcript MGP_WSBEiJ_T0052471.1 MGP_WSBEiJ_G0024779.1 mouse_genomes_project 2 25140789 25150434 - Vav2 protein_coding processed_transcript MGP_WSBEiJ_T0052472.1 MGP_WSBEiJ_G0024779.1 mouse_genomes_project 2 25141451 25143669 - Vav2 protein_coding processed_transcript MGP_WSBEiJ_T0052473.1 MGP_WSBEiJ_G0024779.1 mouse_genomes_project 2 25141451 25143746 - Vav2 protein_coding processed_transcript MGP_WSBEiJ_T0052474.1 MGP_WSBEiJ_G0024779.1 mouse_genomes_project 2 25173551 25218003 - Vav2 protein_coding processed_transcript MGP_WSBEiJ_T0058736.1 MGP_WSBEiJ_G0026259.1 mouse_genomes_project 2 186386623 186388148 + MGP_WSBEiJ_P0058736 Ppdpf protein_coding protein_coding MGP_WSBEiJ_T0058737.1 MGP_WSBEiJ_G0026259.1 mouse_genomes_project 2 186386672 186388118 + Ppdpf protein_coding retained_intron MGP_WSBEiJ_T0058738.1 MGP_WSBEiJ_G0026259.1 mouse_genomes_project 2 186386712 186387881 + MGP_WSBEiJ_P0058738 Ppdpf protein_coding protein_coding MGP_WSBEiJ_T0058739.1 MGP_WSBEiJ_G0026259.1 mouse_genomes_project 2 186386723 186387881 + Ppdpf protein_coding retained_intron MGP_WSBEiJ_T0058740.1 MGP_WSBEiJ_G0026259.1 mouse_genomes_project 2 186386911 186387881 + Ppdpf protein_coding retained_intron MGP_WSBEiJ_T0058741.1 MGP_WSBEiJ_G0026259.1 mouse_genomes_project 2 186387289 186387881 + Ppdpf protein_coding retained_intron MGP_WSBEiJ_T0013128.1 MGP_WSBEiJ_G0011258.1 mouse_genomes_project 2 24902683 24903561 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052054.1 MGP_WSBEiJ_G0024703.1 mouse_genomes_project 2 23031218 23032484 + MGP_WSBEiJ_P0052054 Lrrc26 protein_coding protein_coding MGP_WSBEiJ_T0058463.1 MGP_WSBEiJ_G0026192.1 mouse_genomes_project 2 177165865 177171259 + MGP_WSBEiJ_P0058463 Cstf1 protein_coding protein_coding MGP_WSBEiJ_T0058464.1 MGP_WSBEiJ_G0026192.1 mouse_genomes_project 2 177165918 177177597 + MGP_WSBEiJ_P0058464 Cstf1 protein_coding protein_coding MGP_WSBEiJ_T0100061.1 MGP_WSBEiJ_G0038679.1 mouse_genomes_project 2 113691874 113693964 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0007227.1 MGP_WSBEiJ_G0005927.1 mouse_genomes_project 2 136215704 136218369 + Gm14100 lincRNA lincRNA MGP_WSBEiJ_T0099396.1 MGP_WSBEiJ_G0038059.1 mouse_genomes_project 2 159353247 159353380 - Gm22334 snoRNA snoRNA MGP_WSBEiJ_T0010167.1 MGP_WSBEiJ_G0008324.1 mouse_genomes_project 2 7774914 7775022 + Gm22677 miRNA miRNA MGP_WSBEiJ_T0007126.1 MGP_WSBEiJ_G0005847.1 mouse_genomes_project 2 74027252 74042038 + Gm13667 lincRNA lincRNA MGP_WSBEiJ_T0053386.1 MGP_WSBEiJ_G0024917.1 mouse_genomes_project 2 33720000 33742973 - MGP_WSBEiJ_P0053386 Stom protein_coding protein_coding MGP_WSBEiJ_T0053387.1 MGP_WSBEiJ_G0024917.1 mouse_genomes_project 2 33721354 33726526 - Stom protein_coding retained_intron MGP_WSBEiJ_T0056566.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187156 132204942 + Sirpa protein_coding processed_transcript MGP_WSBEiJ_T0056567.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187160 132204945 + Sirpa protein_coding processed_transcript MGP_WSBEiJ_T0056568.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187160 132210345 + MGP_WSBEiJ_P0056568 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056569.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187160 132226318 + MGP_WSBEiJ_P0056569 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056570.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187160 132226318 + MGP_WSBEiJ_P0056570 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056571.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187186 132205134 + Sirpa protein_coding processed_transcript MGP_WSBEiJ_T0056572.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187235 132226326 + MGP_WSBEiJ_P0056572 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056573.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187516 132226318 + MGP_WSBEiJ_P0056573 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056574.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187526 132226326 + MGP_WSBEiJ_P0056574 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056575.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187867 132226326 + MGP_WSBEiJ_P0056575 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056576.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187874 132224687 + Sirpa protein_coding processed_transcript MGP_WSBEiJ_T0056577.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187880 132224395 + MGP_WSBEiJ_P0056577 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056578.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132187926 132224282 + MGP_WSBEiJ_P0056578 Sirpa protein_coding protein_coding MGP_WSBEiJ_T0056579.1 MGP_WSBEiJ_G0025744.1 mouse_genomes_project 2 132214773 132222142 + Sirpa protein_coding retained_intron MGP_WSBEiJ_T0058049.1 MGP_WSBEiJ_G0026092.1 mouse_genomes_project 2 168390474 168393406 - MGP_WSBEiJ_P0058049 Svs4 protein_coding protein_coding MGP_WSBEiJ_T0099388.1 MGP_WSBEiJ_G0038051.1 mouse_genomes_project 2 145906839 145906955 + Gm22310 snoRNA snoRNA MGP_WSBEiJ_T0007146.1 MGP_WSBEiJ_G0005863.1 mouse_genomes_project 2 82761138 82779543 - A130030D18Rik lincRNA lincRNA MGP_WSBEiJ_T0013091.1 MGP_WSBEiJ_G0011221.1 mouse_genomes_project 2 12895642 12896615 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052019.1 MGP_WSBEiJ_G0024694.1 mouse_genomes_project 2 22973594 22975912 - MGP_WSBEiJ_P0052019 Rnf224 protein_coding protein_coding MGP_WSBEiJ_T0052020.1 MGP_WSBEiJ_G0024694.1 mouse_genomes_project 2 22974101 22975808 - MGP_WSBEiJ_P0052020 Rnf224 protein_coding protein_coding MGP_WSBEiJ_T0054398.1 MGP_WSBEiJ_G0025129.1 mouse_genomes_project 2 76618605 76639053 - MGP_WSBEiJ_P0054398 Prkra protein_coding protein_coding MGP_WSBEiJ_T0054399.1 MGP_WSBEiJ_G0025129.1 mouse_genomes_project 2 76626328 76630267 - Prkra protein_coding processed_transcript MGP_WSBEiJ_T0100700.1 MGP_WSBEiJ_G0039158.1 mouse_genomes_project 2 86076097 86077038 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0053078.1 MGP_WSBEiJ_G0024869.1 mouse_genomes_project 2 30630201 30636291 - MGP_WSBEiJ_P0053078 1110008P14Rik protein_coding protein_coding MGP_WSBEiJ_T0053079.1 MGP_WSBEiJ_G0024869.1 mouse_genomes_project 2 30633529 30636367 - MGP_WSBEiJ_P0053079 1110008P14Rik protein_coding protein_coding MGP_WSBEiJ_T0001047.1 MGP_WSBEiJ_G0000982.1 mouse_genomes_project 2 38199226 38203135 + TEC TEC MGP_WSBEiJ_T0053773.1 MGP_WSBEiJ_G0025007.1 mouse_genomes_project 2 56223411 56231568 - MGP_WSBEiJ_P0053773 Nr4a2 protein_coding protein_coding MGP_WSBEiJ_T0053774.1 MGP_WSBEiJ_G0025007.1 mouse_genomes_project 2 56223415 56243803 - MGP_WSBEiJ_P0053774 Nr4a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053775.1 MGP_WSBEiJ_G0025007.1 mouse_genomes_project 2 56228580 56231616 - Nr4a2 protein_coding processed_transcript MGP_WSBEiJ_T0053776.1 MGP_WSBEiJ_G0025007.1 mouse_genomes_project 2 56229567 56230951 - Nr4a2 protein_coding processed_transcript MGP_WSBEiJ_T0003969.1 MGP_WSBEiJ_G0003526.1 mouse_genomes_project 2 107142677 107143777 + Gm13954 antisense antisense MGP_WSBEiJ_T0058563.1 MGP_WSBEiJ_G0026222.1 mouse_genomes_project 2 183181607 183411697 + MGP_WSBEiJ_P0058563 Phactr3 protein_coding protein_coding MGP_WSBEiJ_T0058564.1 MGP_WSBEiJ_G0026222.1 mouse_genomes_project 2 183181811 183409706 + MGP_WSBEiJ_P0058564 Phactr3 protein_coding protein_coding MGP_WSBEiJ_T0058565.1 MGP_WSBEiJ_G0026222.1 mouse_genomes_project 2 183206437 183409711 + MGP_WSBEiJ_P0058565 Phactr3 protein_coding protein_coding MGP_WSBEiJ_T0058566.1 MGP_WSBEiJ_G0026222.1 mouse_genomes_project 2 183240363 183409706 + MGP_WSBEiJ_P0058566 Phactr3 protein_coding protein_coding MGP_WSBEiJ_T0058567.1 MGP_WSBEiJ_G0026222.1 mouse_genomes_project 2 183400769 183404981 + Phactr3 protein_coding retained_intron MGP_WSBEiJ_T0058568.1 MGP_WSBEiJ_G0026222.1 mouse_genomes_project 2 183401005 183406045 + Phactr3 protein_coding retained_intron MGP_WSBEiJ_T0052607.1 MGP_WSBEiJ_G0024806.1 mouse_genomes_project 2 27630016 27754599 + MGP_WSBEiJ_P0052607 Rapgef1 protein_coding protein_coding MGP_WSBEiJ_T0052608.1 MGP_WSBEiJ_G0024806.1 mouse_genomes_project 2 27630037 27754608 + MGP_WSBEiJ_P0052608 Rapgef1 protein_coding protein_coding MGP_WSBEiJ_T0052609.1 MGP_WSBEiJ_G0024806.1 mouse_genomes_project 2 27692659 27755230 + MGP_WSBEiJ_P0052609 Rapgef1 protein_coding protein_coding MGP_WSBEiJ_T0052610.1 MGP_WSBEiJ_G0024806.1 mouse_genomes_project 2 27692679 27752573 + MGP_WSBEiJ_P0052610 Rapgef1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052611.1 MGP_WSBEiJ_G0024806.1 mouse_genomes_project 2 27715875 27754609 + MGP_WSBEiJ_P0052611 Rapgef1 protein_coding protein_coding MGP_WSBEiJ_T0052612.1 MGP_WSBEiJ_G0024806.1 mouse_genomes_project 2 27744857 27750094 + Rapgef1 protein_coding processed_transcript MGP_WSBEiJ_T0052613.1 MGP_WSBEiJ_G0024806.1 mouse_genomes_project 2 27746637 27748300 + Rapgef1 protein_coding retained_intron MGP_WSBEiJ_T0052568.1 MGP_WSBEiJ_G0024800.1 mouse_genomes_project 2 26875072 26883782 - MGP_WSBEiJ_P0052568 Barhl1 protein_coding protein_coding MGP_WSBEiJ_T0052569.1 MGP_WSBEiJ_G0024800.1 mouse_genomes_project 2 26875077 26879889 - Barhl1 protein_coding processed_transcript MGP_WSBEiJ_T0052570.1 MGP_WSBEiJ_G0024800.1 mouse_genomes_project 2 26876362 26883797 - MGP_WSBEiJ_P0052570 Barhl1 protein_coding protein_coding MGP_WSBEiJ_T0052571.1 MGP_WSBEiJ_G0024800.1 mouse_genomes_project 2 26876362 26884014 - MGP_WSBEiJ_P0052571 Barhl1 protein_coding protein_coding MGP_WSBEiJ_T0052572.1 MGP_WSBEiJ_G0024800.1 mouse_genomes_project 2 26877033 26882875 - Barhl1 protein_coding processed_transcript MGP_WSBEiJ_T0056264.1 MGP_WSBEiJ_G0025668.1 mouse_genomes_project 2 124719538 124791038 + MGP_WSBEiJ_P0056264 Slc28a2 protein_coding protein_coding MGP_WSBEiJ_T0056266.1 MGP_WSBEiJ_G0025668.1 mouse_genomes_project 2 124772849 124790462 + Slc28a2 protein_coding processed_transcript MGP_WSBEiJ_T0004097.1 MGP_WSBEiJ_G0003624.1 mouse_genomes_project 2 177881324 177890221 - Gm14453 antisense antisense MGP_WSBEiJ_T0057415.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158071948 158186789 + MGP_WSBEiJ_P0057415 Cbfa2t2 protein_coding protein_coding MGP_WSBEiJ_T0057416.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158071951 158174089 + MGP_WSBEiJ_P0057416 Cbfa2t2 protein_coding protein_coding MGP_WSBEiJ_T0057417.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158071962 158186789 + MGP_WSBEiJ_P0057417 Cbfa2t2 protein_coding protein_coding MGP_WSBEiJ_T0057418.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158072002 158162542 + MGP_WSBEiJ_P0057418 Cbfa2t2 protein_coding protein_coding MGP_WSBEiJ_T0057419.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158072309 158147771 + MGP_WSBEiJ_P0057419 Cbfa2t2 protein_coding protein_coding MGP_WSBEiJ_T0057420.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158143391 158186785 + MGP_WSBEiJ_P0057420 Cbfa2t2 protein_coding protein_coding MGP_WSBEiJ_T0057421.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158160679 158162770 + Cbfa2t2 protein_coding retained_intron MGP_WSBEiJ_T0057422.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158171659 158179284 + Cbfa2t2 protein_coding retained_intron MGP_WSBEiJ_T0057423.1 MGP_WSBEiJ_G0025964.1 mouse_genomes_project 2 158178723 158182401 + Cbfa2t2 protein_coding retained_intron MGP_WSBEiJ_T0004057.1 MGP_WSBEiJ_G0003592.1 mouse_genomes_project 2 160066113 160074647 - Gm14252 antisense antisense MGP_WSBEiJ_T0053445.1 MGP_WSBEiJ_G0024931.1 mouse_genomes_project 2 34937527 34938469 - MGP_WSBEiJ_P0053445 Olfr341 protein_coding protein_coding MGP_WSBEiJ_T0001044.1 MGP_WSBEiJ_G0000979.1 mouse_genomes_project 2 37342143 37344102 - TEC TEC MGP_WSBEiJ_T0099356.1 MGP_WSBEiJ_G0038019.1 mouse_genomes_project 2 56776180 56776331 - Gm25388 snoRNA snoRNA MGP_WSBEiJ_T0055606.1 MGP_WSBEiJ_G0025511.1 mouse_genomes_project 2 112975592 112976647 + MGP_WSBEiJ_P0055606 protein_coding protein_coding MGP_WSBEiJ_T0053974.1 MGP_WSBEiJ_G0025040.1 mouse_genomes_project 2 64277785 64281031 - Grb14 protein_coding processed_transcript MGP_WSBEiJ_T0053975.1 MGP_WSBEiJ_G0025040.1 mouse_genomes_project 2 64277785 64283327 - MGP_WSBEiJ_P0053975 Grb14 protein_coding protein_coding MGP_WSBEiJ_T0053976.1 MGP_WSBEiJ_G0025040.1 mouse_genomes_project 2 64277785 64393331 - MGP_WSBEiJ_P0053976 Grb14 protein_coding protein_coding MGP_WSBEiJ_T0053977.1 MGP_WSBEiJ_G0025040.1 mouse_genomes_project 2 64277785 64283252 - MGP_WSBEiJ_P0053977 Grb14 protein_coding protein_coding MGP_WSBEiJ_T0053978.1 MGP_WSBEiJ_G0025040.1 mouse_genomes_project 2 64295651 64301395 - Grb14 protein_coding processed_transcript MGP_WSBEiJ_T0053979.1 MGP_WSBEiJ_G0025040.1 mouse_genomes_project 2 64297119 64345478 - MGP_WSBEiJ_P0053979 Grb14 protein_coding protein_coding MGP_WSBEiJ_T0053980.1 MGP_WSBEiJ_G0025040.1 mouse_genomes_project 2 64303241 64345455 - Grb14 protein_coding processed_transcript MGP_WSBEiJ_T0053981.1 MGP_WSBEiJ_G0025040.1 mouse_genomes_project 2 64393216 64395347 - Grb14 protein_coding processed_transcript MGP_WSBEiJ_T0017211.1 MGP_WSBEiJ_G0014862.1 mouse_genomes_project 2 91608943 91618095 - Ptpmt1 processed_transcript processed_transcript MGP_WSBEiJ_T0017212.1 MGP_WSBEiJ_G0014862.1 mouse_genomes_project 2 91610940 91618288 - Ptpmt1 processed_transcript processed_transcript MGP_WSBEiJ_T0017213.1 MGP_WSBEiJ_G0014862.1 mouse_genomes_project 2 91610940 91618496 - Ptpmt1 processed_transcript processed_transcript MGP_WSBEiJ_T0017214.1 MGP_WSBEiJ_G0014862.1 mouse_genomes_project 2 91611221 91617833 - Ptpmt1 processed_transcript processed_transcript MGP_WSBEiJ_T0017215.1 MGP_WSBEiJ_G0014862.1 mouse_genomes_project 2 91614264 91617906 - Ptpmt1 processed_transcript processed_transcript MGP_WSBEiJ_T0055596.1 MGP_WSBEiJ_G0025502.1 mouse_genomes_project 2 112756128 112782111 - MGP_WSBEiJ_P0055596 Gm15130 protein_coding protein_coding MGP_WSBEiJ_T0056747.1 MGP_WSBEiJ_G0025782.1 mouse_genomes_project 2 133893952 133907885 + MGP_WSBEiJ_P0056747 Mavs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056748.1 MGP_WSBEiJ_G0025782.1 mouse_genomes_project 2 133893956 133907888 + MGP_WSBEiJ_P0056748 Mavs protein_coding protein_coding MGP_WSBEiJ_T0056749.1 MGP_WSBEiJ_G0025782.1 mouse_genomes_project 2 133893994 133907888 + MGP_WSBEiJ_P0056749 Mavs protein_coding protein_coding MGP_WSBEiJ_T0056750.1 MGP_WSBEiJ_G0025782.1 mouse_genomes_project 2 133901817 133905529 + Mavs protein_coding processed_transcript MGP_WSBEiJ_T0054618.1 MGP_WSBEiJ_G0025167.1 mouse_genomes_project 2 85092180 85121859 - MGP_WSBEiJ_P0054618 Zdhhc5 protein_coding protein_coding MGP_WSBEiJ_T0054619.1 MGP_WSBEiJ_G0025167.1 mouse_genomes_project 2 85117786 85121365 - Zdhhc5 protein_coding processed_transcript MGP_WSBEiJ_T0054620.1 MGP_WSBEiJ_G0025167.1 mouse_genomes_project 2 85117935 85121715 - Zdhhc5 protein_coding processed_transcript MGP_WSBEiJ_T0053240.1 MGP_WSBEiJ_G0024896.1 mouse_genomes_project 2 31445697 31687220 - MGP_WSBEiJ_P0053240 Ralgps1 protein_coding protein_coding MGP_WSBEiJ_T0053241.1 MGP_WSBEiJ_G0024896.1 mouse_genomes_project 2 31445701 31687272 - MGP_WSBEiJ_P0053241 Ralgps1 protein_coding protein_coding MGP_WSBEiJ_T0053242.1 MGP_WSBEiJ_G0024896.1 mouse_genomes_project 2 31445701 31687277 - MGP_WSBEiJ_P0053242 Ralgps1 protein_coding protein_coding MGP_WSBEiJ_T0053243.1 MGP_WSBEiJ_G0024896.1 mouse_genomes_project 2 31449253 31687269 - MGP_WSBEiJ_P0053243 Ralgps1 protein_coding protein_coding MGP_WSBEiJ_T0053244.1 MGP_WSBEiJ_G0024896.1 mouse_genomes_project 2 31455587 31470206 - Ralgps1 protein_coding processed_transcript MGP_WSBEiJ_T0053249.1 MGP_WSBEiJ_G0024896.1 mouse_genomes_project 2 31571854 31687261 - Ralgps1 protein_coding retained_intron MGP_WSBEiJ_T0053337.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33333009 33349344 - MGP_WSBEiJ_P0053337 Traf1 protein_coding protein_coding MGP_WSBEiJ_T0053338.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33334507 33352776 - MGP_WSBEiJ_P0053338 Traf1 protein_coding protein_coding MGP_WSBEiJ_T0053339.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33334509 33352963 - MGP_WSBEiJ_P0053339 Traf1 protein_coding protein_coding MGP_WSBEiJ_T0053340.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33338722 33352773 - Traf1 protein_coding processed_transcript MGP_WSBEiJ_T0053341.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33347253 33349317 - MGP_WSBEiJ_P0053341 Traf1 protein_coding protein_coding MGP_WSBEiJ_T0053342.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33347362 33349342 - Traf1 protein_coding retained_intron MGP_WSBEiJ_T0053343.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33347374 33350087 - Traf1 protein_coding processed_transcript MGP_WSBEiJ_T0053344.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33348727 33352788 - Traf1 protein_coding retained_intron MGP_WSBEiJ_T0053345.1 MGP_WSBEiJ_G0024911.1 mouse_genomes_project 2 33349332 33352753 - Traf1 protein_coding processed_transcript MGP_WSBEiJ_T0007320.1 MGP_WSBEiJ_G0006007.1 mouse_genomes_project 2 184511734 184513680 + 4930591A17Rik lincRNA lincRNA MGP_WSBEiJ_T0017326.1 MGP_WSBEiJ_G0014914.1 mouse_genomes_project 2 173265077 173267043 + Gm14261 processed_transcript processed_transcript MGP_WSBEiJ_T0052954.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 29882180 29892166 + Abl1 protein_coding retained_intron MGP_WSBEiJ_T0052955.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 29882341 29902674 + Abl1 protein_coding processed_transcript MGP_WSBEiJ_T0052956.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 29882355 30016408 + MGP_WSBEiJ_P0052956 Abl1 protein_coding protein_coding MGP_WSBEiJ_T0052957.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 29882356 30013203 + MGP_WSBEiJ_P0052957 Abl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052958.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 29883269 29991419 + MGP_WSBEiJ_P0052958 Abl1 protein_coding protein_coding MGP_WSBEiJ_T0052959.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 29883415 29992051 + MGP_WSBEiJ_P0052959 Abl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052960.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 29972987 30017094 + MGP_WSBEiJ_P0052960 Abl1 protein_coding protein_coding MGP_WSBEiJ_T0052961.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 29973217 29992051 + MGP_WSBEiJ_P0052961 Abl1 protein_coding protein_coding MGP_WSBEiJ_T0052962.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 30003198 30007438 + Abl1 protein_coding retained_intron MGP_WSBEiJ_T0052963.1 MGP_WSBEiJ_G0024854.1 mouse_genomes_project 2 30009509 30010856 + Abl1 protein_coding retained_intron MGP_WSBEiJ_T0007184.1 MGP_WSBEiJ_G0005894.1 mouse_genomes_project 2 112669991 112676242 - Gm13942 lincRNA lincRNA MGP_WSBEiJ_T0055281.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94890508 94894659 - Alkbh3 protein_coding processed_transcript MGP_WSBEiJ_T0055282.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94890508 94894690 - Alkbh3 protein_coding processed_transcript MGP_WSBEiJ_T0055283.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94890508 94921284 - MGP_WSBEiJ_P0055283 Alkbh3 protein_coding protein_coding MGP_WSBEiJ_T0055284.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94890587 94891585 - Alkbh3 protein_coding processed_transcript MGP_WSBEiJ_T0055285.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94890595 94921207 - MGP_WSBEiJ_P0055285 Alkbh3 protein_coding protein_coding MGP_WSBEiJ_T0055286.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94890843 94921310 - MGP_WSBEiJ_P0055286 Alkbh3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0055287.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94906013 94920908 - Alkbh3 protein_coding processed_transcript MGP_WSBEiJ_T0055288.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94906082 94914843 - Alkbh3 protein_coding processed_transcript MGP_WSBEiJ_T0055289.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94906082 94921231 - MGP_WSBEiJ_P0055289 Alkbh3 protein_coding protein_coding MGP_WSBEiJ_T0055290.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94915429 94921231 - Alkbh3 protein_coding processed_transcript MGP_WSBEiJ_T0055291.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94915899 94921229 - Alkbh3 protein_coding processed_transcript MGP_WSBEiJ_T0055292.1 MGP_WSBEiJ_G0025436.1 mouse_genomes_project 2 94917692 94921229 - Alkbh3 protein_coding processed_transcript MGP_WSBEiJ_T0007251.1 MGP_WSBEiJ_G0005948.1 mouse_genomes_project 2 156196249 156198208 - Gm26841 lincRNA lincRNA MGP_WSBEiJ_T0054624.1 MGP_WSBEiJ_G0025169.1 mouse_genomes_project 2 85141943 85146553 + MGP_WSBEiJ_P0054624 Ypel4 protein_coding protein_coding MGP_WSBEiJ_T0054625.1 MGP_WSBEiJ_G0025169.1 mouse_genomes_project 2 85141983 85146553 + MGP_WSBEiJ_P0054625 Ypel4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054626.1 MGP_WSBEiJ_G0025169.1 mouse_genomes_project 2 85142008 85143512 + Ypel4 protein_coding processed_transcript MGP_WSBEiJ_T0054627.1 MGP_WSBEiJ_G0025169.1 mouse_genomes_project 2 85142112 85146547 + Ypel4 protein_coding retained_intron MGP_WSBEiJ_T0056674.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133350961 133489160 - MGP_WSBEiJ_P0056674 4930402H24Rik protein_coding protein_coding MGP_WSBEiJ_T0056675.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133352620 133362730 - MGP_WSBEiJ_P0056675 4930402H24Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056676.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133354088 133374480 - MGP_WSBEiJ_P0056676 4930402H24Rik protein_coding protein_coding MGP_WSBEiJ_T0056677.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133362639 133374747 - 4930402H24Rik protein_coding processed_transcript MGP_WSBEiJ_T0056678.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133379658 133382638 - 4930402H24Rik protein_coding retained_intron MGP_WSBEiJ_T0056679.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133382137 133401432 - 4930402H24Rik protein_coding processed_transcript MGP_WSBEiJ_T0056680.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133382148 133416911 - MGP_WSBEiJ_P0056680 4930402H24Rik protein_coding protein_coding MGP_WSBEiJ_T0056681.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133392324 133489176 - 4930402H24Rik protein_coding retained_intron MGP_WSBEiJ_T0056682.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133423436 133424514 - 4930402H24Rik protein_coding processed_transcript MGP_WSBEiJ_T0056683.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133423633 133458596 - 4930402H24Rik protein_coding processed_transcript MGP_WSBEiJ_T0056684.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133429311 133489155 - 4930402H24Rik protein_coding retained_intron MGP_WSBEiJ_T0056685.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133451755 133461983 - 4930402H24Rik protein_coding processed_transcript MGP_WSBEiJ_T0056686.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133453712 133489189 - MGP_WSBEiJ_P0056686 4930402H24Rik protein_coding protein_coding MGP_WSBEiJ_T0056687.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133458563 133489181 - MGP_WSBEiJ_P0056687 4930402H24Rik protein_coding protein_coding MGP_WSBEiJ_T0056688.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133458598 133489178 - MGP_WSBEiJ_P0056688 4930402H24Rik protein_coding protein_coding MGP_WSBEiJ_T0056689.1 MGP_WSBEiJ_G0025770.1 mouse_genomes_project 2 133460552 133558075 - MGP_WSBEiJ_P0056689 4930402H24Rik protein_coding protein_coding MGP_WSBEiJ_T0051796.1 MGP_WSBEiJ_G0024654.1 mouse_genomes_project 2 18849342 18874440 - MGP_WSBEiJ_P0051796 Enkur protein_coding protein_coding MGP_WSBEiJ_T0051797.1 MGP_WSBEiJ_G0024654.1 mouse_genomes_project 2 18863144 18874314 - Enkur protein_coding processed_transcript MGP_WSBEiJ_T0051798.1 MGP_WSBEiJ_G0024654.1 mouse_genomes_project 2 18865529 18874427 - Enkur protein_coding processed_transcript MGP_WSBEiJ_T0013289.1 MGP_WSBEiJ_G0011419.1 mouse_genomes_project 2 87815601 87817063 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099360.1 MGP_WSBEiJ_G0038023.1 mouse_genomes_project 2 64770776 64770890 - Gm24138 snoRNA snoRNA MGP_WSBEiJ_T0003995.1 MGP_WSBEiJ_G0003547.1 mouse_genomes_project 2 131295702 131298137 - Gm14011 antisense antisense MGP_WSBEiJ_T0013508.1 MGP_WSBEiJ_G0011638.1 mouse_genomes_project 2 184332530 184333121 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013423.1 MGP_WSBEiJ_G0011553.1 mouse_genomes_project 2 147036202 147036533 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052091.1 MGP_WSBEiJ_G0024708.1 mouse_genomes_project 2 23124671 23130574 + MGP_WSBEiJ_P0052091 Sapcd2 protein_coding protein_coding MGP_WSBEiJ_T0052092.1 MGP_WSBEiJ_G0024708.1 mouse_genomes_project 2 23124680 23129164 + MGP_WSBEiJ_P0052092 Sapcd2 protein_coding protein_coding MGP_WSBEiJ_T0052093.1 MGP_WSBEiJ_G0024708.1 mouse_genomes_project 2 23124684 23129164 + MGP_WSBEiJ_P0052093 Sapcd2 protein_coding protein_coding MGP_WSBEiJ_T0052094.1 MGP_WSBEiJ_G0024708.1 mouse_genomes_project 2 23124710 23127489 + Sapcd2 protein_coding processed_transcript MGP_WSBEiJ_T0052095.1 MGP_WSBEiJ_G0024708.1 mouse_genomes_project 2 23127366 23128633 + Sapcd2 protein_coding processed_transcript MGP_WSBEiJ_T0052096.1 MGP_WSBEiJ_G0024708.1 mouse_genomes_project 2 23128134 23129138 + Sapcd2 protein_coding processed_transcript MGP_WSBEiJ_T0052097.1 MGP_WSBEiJ_G0024708.1 mouse_genomes_project 2 23128320 23129161 + Sapcd2 protein_coding processed_transcript MGP_WSBEiJ_T0013058.1 MGP_WSBEiJ_G0011188.1 mouse_genomes_project 2 14797 15313 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055625.1 MGP_WSBEiJ_G0025530.1 mouse_genomes_project 2 113715077 113717953 - MGP_WSBEiJ_P0055625 protein_coding protein_coding MGP_WSBEiJ_T0055369.1 MGP_WSBEiJ_G0025453.1 mouse_genomes_project 2 104298143 104351115 - MGP_WSBEiJ_P0055369 Pdhx protein_coding protein_coding MGP_WSBEiJ_T0055370.1 MGP_WSBEiJ_G0025453.1 mouse_genomes_project 2 104310362 104350937 - MGP_WSBEiJ_P0055370 Pdhx protein_coding protein_coding MGP_WSBEiJ_T0055371.1 MGP_WSBEiJ_G0025453.1 mouse_genomes_project 2 104317401 104351064 - MGP_WSBEiJ_P0055371 Pdhx protein_coding protein_coding MGP_WSBEiJ_T0013387.1 MGP_WSBEiJ_G0011517.1 mouse_genomes_project 2 131093762 131094743 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013067.1 MGP_WSBEiJ_G0011197.1 mouse_genomes_project 2 1997827 1998035 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053379.1 MGP_WSBEiJ_G0024916.1 mouse_genomes_project 2 33662528 33713895 + MGP_WSBEiJ_P0053379 Gsn protein_coding protein_coding MGP_WSBEiJ_T0053380.1 MGP_WSBEiJ_G0024916.1 mouse_genomes_project 2 33662532 33709272 + MGP_WSBEiJ_P0053380 Gsn protein_coding protein_coding MGP_WSBEiJ_T0053381.1 MGP_WSBEiJ_G0024916.1 mouse_genomes_project 2 33662544 33699570 + MGP_WSBEiJ_P0053381 Gsn protein_coding protein_coding MGP_WSBEiJ_T0053382.1 MGP_WSBEiJ_G0024916.1 mouse_genomes_project 2 33662557 33699568 + MGP_WSBEiJ_P0053382 Gsn protein_coding protein_coding MGP_WSBEiJ_T0053383.1 MGP_WSBEiJ_G0024916.1 mouse_genomes_project 2 33662597 33696444 + MGP_WSBEiJ_P0053383 Gsn protein_coding protein_coding MGP_WSBEiJ_T0053384.1 MGP_WSBEiJ_G0024916.1 mouse_genomes_project 2 33688361 33713897 + MGP_WSBEiJ_P0053384 Gsn protein_coding protein_coding MGP_WSBEiJ_T0053385.1 MGP_WSBEiJ_G0024916.1 mouse_genomes_project 2 33688494 33691002 + Gsn protein_coding retained_intron MGP_WSBEiJ_T0007225.1 MGP_WSBEiJ_G0005925.1 mouse_genomes_project 2 135696106 135697470 + Gm14102 lincRNA lincRNA MGP_WSBEiJ_T0013151.1 MGP_WSBEiJ_G0011281.1 mouse_genomes_project 2 36118481 36119277 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003830.1 MGP_WSBEiJ_G0003425.1 mouse_genomes_project 2 15607075 15614172 + Gm13330 antisense antisense MGP_WSBEiJ_T0052169.1 MGP_WSBEiJ_G0024719.1 mouse_genomes_project 2 23282312 23314188 - MGP_WSBEiJ_P0052169 Traf2 protein_coding protein_coding MGP_WSBEiJ_T0052170.1 MGP_WSBEiJ_G0024719.1 mouse_genomes_project 2 23283196 23305155 - Traf2 protein_coding retained_intron MGP_WSBEiJ_T0052171.1 MGP_WSBEiJ_G0024719.1 mouse_genomes_project 2 23283196 23314158 - MGP_WSBEiJ_P0052171 Traf2 protein_coding protein_coding MGP_WSBEiJ_T0056386.1 MGP_WSBEiJ_G0025697.1 mouse_genomes_project 2 129150039 129204738 + Usp8 protein_coding processed_transcript MGP_WSBEiJ_T0056387.1 MGP_WSBEiJ_G0025697.1 mouse_genomes_project 2 129150054 129204787 + MGP_WSBEiJ_P0056387 Usp8 protein_coding protein_coding MGP_WSBEiJ_T0056388.1 MGP_WSBEiJ_G0025697.1 mouse_genomes_project 2 129150071 129204780 + MGP_WSBEiJ_P0056388 Usp8 protein_coding protein_coding MGP_WSBEiJ_T0013259.1 MGP_WSBEiJ_G0011389.1 mouse_genomes_project 2 78881424 78881922 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057493.1 MGP_WSBEiJ_G0025983.1 mouse_genomes_project 2 159079494 159130723 - MGP_WSBEiJ_P0057493 Ncoa6 protein_coding protein_coding MGP_WSBEiJ_T0057494.1 MGP_WSBEiJ_G0025983.1 mouse_genomes_project 2 159079503 159165610 - MGP_WSBEiJ_P0057494 Ncoa6 protein_coding protein_coding MGP_WSBEiJ_T0057495.1 MGP_WSBEiJ_G0025983.1 mouse_genomes_project 2 159079507 159086126 - Ncoa6 protein_coding retained_intron MGP_WSBEiJ_T0057496.1 MGP_WSBEiJ_G0025983.1 mouse_genomes_project 2 159079507 159092650 - Ncoa6 protein_coding retained_intron MGP_WSBEiJ_T0057497.1 MGP_WSBEiJ_G0025983.1 mouse_genomes_project 2 159095923 159165698 - MGP_WSBEiJ_P0057497 Ncoa6 protein_coding protein_coding MGP_WSBEiJ_T0057498.1 MGP_WSBEiJ_G0025983.1 mouse_genomes_project 2 159105495 159109012 - Ncoa6 protein_coding processed_transcript MGP_WSBEiJ_T0057499.1 MGP_WSBEiJ_G0025983.1 mouse_genomes_project 2 159110384 159130725 - MGP_WSBEiJ_P0057499 Ncoa6 protein_coding protein_coding MGP_WSBEiJ_T0057500.1 MGP_WSBEiJ_G0025983.1 mouse_genomes_project 2 159127953 159165628 - Ncoa6 protein_coding processed_transcript MGP_WSBEiJ_T0003932.1 MGP_WSBEiJ_G0003504.1 mouse_genomes_project 2 73282186 73289376 + Gm13707 antisense antisense MGP_WSBEiJ_T0007238.1 MGP_WSBEiJ_G0005937.1 mouse_genomes_project 2 149763811 149768035 + 4933406D12Rik lincRNA lincRNA MGP_WSBEiJ_T0013143.1 MGP_WSBEiJ_G0011273.1 mouse_genomes_project 2 34598123 34598488 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010208.1 MGP_WSBEiJ_G0008365.1 mouse_genomes_project 2 7832392 7832519 + Mir669i miRNA miRNA MGP_WSBEiJ_T0013491.1 MGP_WSBEiJ_G0011621.1 mouse_genomes_project 2 170194749 170195325 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010238.1 MGP_WSBEiJ_G0008395.1 mouse_genomes_project 2 30945186 30945251 + miRNA miRNA MGP_WSBEiJ_T0007095.1 MGP_WSBEiJ_G0005821.1 mouse_genomes_project 2 50268209 50275613 - lincRNA lincRNA MGP_WSBEiJ_T0051855.1 MGP_WSBEiJ_G0024665.1 mouse_genomes_project 2 20853345 20919837 + MGP_WSBEiJ_P0051855 4931423N10Rik protein_coding protein_coding MGP_WSBEiJ_T0007182.1 MGP_WSBEiJ_G0005892.1 mouse_genomes_project 2 109682154 109801061 - Gm13912 lincRNA lincRNA MGP_WSBEiJ_T0007262.1 MGP_WSBEiJ_G0005956.1 mouse_genomes_project 2 161419240 161420978 - Platr27 lincRNA lincRNA MGP_WSBEiJ_T0054045.1 MGP_WSBEiJ_G0025050.1 mouse_genomes_project 2 66147761 66261821 - MGP_WSBEiJ_P0054045 Scn7a protein_coding protein_coding MGP_WSBEiJ_T0053587.1 MGP_WSBEiJ_G0024977.1 mouse_genomes_project 2 38645769 38646194 - MGP_WSBEiJ_P0053587 protein_coding protein_coding MGP_WSBEiJ_T0052383.1 MGP_WSBEiJ_G0024762.1 mouse_genomes_project 2 24705997 24720262 - MGP_WSBEiJ_P0052383 Abo protein_coding protein_coding MGP_WSBEiJ_T0052384.1 MGP_WSBEiJ_G0024762.1 mouse_genomes_project 2 24705997 24729300 - MGP_WSBEiJ_P0052384 Abo protein_coding protein_coding MGP_WSBEiJ_T0007083.1 MGP_WSBEiJ_G0005810.1 mouse_genomes_project 2 43862837 43874262 + Gm28643 lincRNA lincRNA MGP_WSBEiJ_T0055929.1 MGP_WSBEiJ_G0025608.1 mouse_genomes_project 2 122098504 122113879 + MGP_WSBEiJ_P0055929 Gm28042 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055931.1 MGP_WSBEiJ_G0025608.1 mouse_genomes_project 2 122098515 122113881 + MGP_WSBEiJ_P0055931 Gm28042 protein_coding protein_coding MGP_WSBEiJ_T0055932.1 MGP_WSBEiJ_G0025608.1 mouse_genomes_project 2 122098518 122112445 + MGP_WSBEiJ_P0055932 Gm28042 protein_coding protein_coding MGP_WSBEiJ_T0055936.1 MGP_WSBEiJ_G0025608.1 mouse_genomes_project 2 122102719 122105857 + MGP_WSBEiJ_P0055936 Gm28042 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100740.1 MGP_WSBEiJ_G0039198.1 mouse_genomes_project 2 124721722 124721998 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0055681.1 MGP_WSBEiJ_G0025551.1 mouse_genomes_project 2 115752203 115756229 - MGP_WSBEiJ_P0055681 Gjd2 protein_coding protein_coding MGP_WSBEiJ_T0017167.1 MGP_WSBEiJ_G0014830.1 mouse_genomes_project 2 28363204 28384834 - Gm14471 processed_transcript processed_transcript MGP_WSBEiJ_T0007217.1 MGP_WSBEiJ_G0005920.1 mouse_genomes_project 2 130955350 130956449 + Gm14010 lincRNA lincRNA MGP_WSBEiJ_T0001061.1 MGP_WSBEiJ_G0000996.1 mouse_genomes_project 2 119988261 119989883 + TEC TEC MGP_WSBEiJ_T0010179.1 MGP_WSBEiJ_G0008336.1 mouse_genomes_project 2 7782132 7782222 + Mir297a-2 miRNA miRNA MGP_WSBEiJ_T0055623.1 MGP_WSBEiJ_G0025528.1 mouse_genomes_project 2 113676070 113677033 - MGP_WSBEiJ_P0055623 Olfr1309 protein_coding protein_coding MGP_WSBEiJ_T0055674.1 MGP_WSBEiJ_G0025548.1 mouse_genomes_project 2 115491762 115505465 - MGP_WSBEiJ_P0055674 Grem1 protein_coding protein_coding MGP_WSBEiJ_T0058469.1 MGP_WSBEiJ_G0026194.1 mouse_genomes_project 2 177245406 177274759 + MGP_WSBEiJ_P0058469 Rtfdc1 protein_coding protein_coding MGP_WSBEiJ_T0058470.1 MGP_WSBEiJ_G0026194.1 mouse_genomes_project 2 177245452 177271526 + Rtfdc1 protein_coding retained_intron MGP_WSBEiJ_T0058473.1 MGP_WSBEiJ_G0026194.1 mouse_genomes_project 2 177257812 177274759 + Rtfdc1 protein_coding processed_transcript MGP_WSBEiJ_T0053513.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36247074 36738402 - MGP_WSBEiJ_P0053513 Dennd1a protein_coding protein_coding MGP_WSBEiJ_T0053514.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36249155 36301150 - MGP_WSBEiJ_P0053514 Dennd1a protein_coding protein_coding MGP_WSBEiJ_T0053515.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36265643 36738417 - MGP_WSBEiJ_P0053515 Dennd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053516.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36385890 36738404 - MGP_WSBEiJ_P0053516 Dennd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053517.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36385935 36738215 - MGP_WSBEiJ_P0053517 Dennd1a protein_coding protein_coding MGP_WSBEiJ_T0053518.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36472662 36611421 - Dennd1a protein_coding retained_intron MGP_WSBEiJ_T0053519.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36489805 36738385 - MGP_WSBEiJ_P0053519 Dennd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053520.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36570837 36738245 - MGP_WSBEiJ_P0053520 Dennd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053521.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36604555 36691261 - Dennd1a protein_coding retained_intron MGP_WSBEiJ_T0053522.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36609038 36613159 - Dennd1a protein_coding retained_intron MGP_WSBEiJ_T0053523.1 MGP_WSBEiJ_G0024964.1 mouse_genomes_project 2 36683854 36738241 - Dennd1a protein_coding retained_intron MGP_WSBEiJ_T0051415.1 MGP_WSBEiJ_G0024595.1 mouse_genomes_project 2 3224309 3258866 - MGP_WSBEiJ_P0051415 Proser2 protein_coding protein_coding MGP_WSBEiJ_T0051416.1 MGP_WSBEiJ_G0024595.1 mouse_genomes_project 2 3226728 3258801 - MGP_WSBEiJ_P0051416 Proser2 protein_coding protein_coding MGP_WSBEiJ_T0051417.1 MGP_WSBEiJ_G0024595.1 mouse_genomes_project 2 3229254 3258794 - MGP_WSBEiJ_P0051417 Proser2 protein_coding protein_coding MGP_WSBEiJ_T0051418.1 MGP_WSBEiJ_G0024595.1 mouse_genomes_project 2 3253461 3258836 - Proser2 protein_coding processed_transcript MGP_WSBEiJ_T0051777.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18501686 18622004 - MGP_WSBEiJ_P0051777 Arhgap21 protein_coding protein_coding MGP_WSBEiJ_T0051778.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18501686 18623534 - MGP_WSBEiJ_P0051778 Arhgap21 protein_coding protein_coding MGP_WSBEiJ_T0051779.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18501707 18622003 - MGP_WSBEiJ_P0051779 Arhgap21 protein_coding protein_coding MGP_WSBEiJ_T0051780.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18502361 18623179 - MGP_WSBEiJ_P0051780 Arhgap21 protein_coding protein_coding MGP_WSBEiJ_T0051781.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18503719 18507018 - Arhgap21 protein_coding retained_intron MGP_WSBEiJ_T0051782.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18503810 18538511 - MGP_WSBEiJ_P0051782 Arhgap21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051783.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18504011 18513661 - Arhgap21 protein_coding retained_intron MGP_WSBEiJ_T0051784.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18504147 18508402 - Arhgap21 protein_coding retained_intron MGP_WSBEiJ_T0051785.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18506811 18509476 - Arhgap21 protein_coding processed_transcript MGP_WSBEiJ_T0051786.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18506812 18513654 - Arhgap21 protein_coding processed_transcript MGP_WSBEiJ_T0051787.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18507860 18621693 - MGP_WSBEiJ_P0051787 Arhgap21 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051788.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18512687 18525789 - MGP_WSBEiJ_P0051788 Arhgap21 protein_coding protein_coding MGP_WSBEiJ_T0051789.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18513201 18514875 - Arhgap21 protein_coding retained_intron MGP_WSBEiJ_T0051790.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18541959 18569067 - Arhgap21 protein_coding processed_transcript MGP_WSBEiJ_T0051791.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18545495 18597589 - MGP_WSBEiJ_P0051791 Arhgap21 protein_coding protein_coding MGP_WSBEiJ_T0051792.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18569172 18623278 - MGP_WSBEiJ_P0051792 Arhgap21 protein_coding protein_coding MGP_WSBEiJ_T0051793.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18621880 18623137 - Arhgap21 protein_coding processed_transcript MGP_WSBEiJ_T0051794.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18621905 18623485 - Arhgap21 protein_coding processed_transcript MGP_WSBEiJ_T0051795.1 MGP_WSBEiJ_G0024653.1 mouse_genomes_project 2 18621972 18623533 - Arhgap21 protein_coding processed_transcript MGP_WSBEiJ_T0007154.1 MGP_WSBEiJ_G0005871.1 mouse_genomes_project 2 93319380 93365105 + Gm13814 lincRNA lincRNA MGP_WSBEiJ_T0056363.1 MGP_WSBEiJ_G0025693.1 mouse_genomes_project 2 128747995 128934961 - MGP_WSBEiJ_P0056363 Atp8b4 protein_coding protein_coding MGP_WSBEiJ_T0056364.1 MGP_WSBEiJ_G0025693.1 mouse_genomes_project 2 128749558 128924367 - MGP_WSBEiJ_P0056364 Atp8b4 protein_coding protein_coding MGP_WSBEiJ_T0056365.1 MGP_WSBEiJ_G0025693.1 mouse_genomes_project 2 128799378 128924347 - Atp8b4 protein_coding retained_intron MGP_WSBEiJ_T0056366.1 MGP_WSBEiJ_G0025693.1 mouse_genomes_project 2 128799424 128935103 - MGP_WSBEiJ_P0056366 Atp8b4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056367.1 MGP_WSBEiJ_G0025693.1 mouse_genomes_project 2 128821128 128935788 - MGP_WSBEiJ_P0056367 Atp8b4 protein_coding protein_coding MGP_WSBEiJ_T0017320.1 MGP_WSBEiJ_G0014910.1 mouse_genomes_project 2 166686697 166694479 + 9430021M05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0013302.1 MGP_WSBEiJ_G0011432.1 mouse_genomes_project 2 91741325 91741670 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057906.1 MGP_WSBEiJ_G0026054.1 mouse_genomes_project 2 164617341 164697778 + MGP_WSBEiJ_P0057906 Top1 protein_coding protein_coding MGP_WSBEiJ_T0057907.1 MGP_WSBEiJ_G0026054.1 mouse_genomes_project 2 164617433 164621562 + Top1 protein_coding processed_transcript MGP_WSBEiJ_T0057908.1 MGP_WSBEiJ_G0026054.1 mouse_genomes_project 2 164644905 164660428 + Top1 protein_coding retained_intron MGP_WSBEiJ_T0057909.1 MGP_WSBEiJ_G0026054.1 mouse_genomes_project 2 164661145 164668921 + Top1 protein_coding retained_intron MGP_WSBEiJ_T0057910.1 MGP_WSBEiJ_G0026054.1 mouse_genomes_project 2 164677137 164678674 + Top1 protein_coding processed_transcript MGP_WSBEiJ_T0057911.1 MGP_WSBEiJ_G0026054.1 mouse_genomes_project 2 164692436 164696398 + Top1 protein_coding retained_intron MGP_WSBEiJ_T0097020.1 MGP_WSBEiJ_G0035701.1 mouse_genomes_project 2 18839783 18839914 + Gm25368 rRNA rRNA MGP_WSBEiJ_T0097021.1 MGP_WSBEiJ_G0035702.1 mouse_genomes_project 2 27459981 27460116 + Gm24976 rRNA rRNA MGP_WSBEiJ_T0010307.1 MGP_WSBEiJ_G0008464.1 mouse_genomes_project 2 162974189 162974282 + Gm44319 miRNA miRNA MGP_WSBEiJ_T0010235.1 MGP_WSBEiJ_G0008392.1 mouse_genomes_project 2 30563858 30563937 + Gm23363 miRNA miRNA MGP_WSBEiJ_T0003821.1 MGP_WSBEiJ_G0003418.1 mouse_genomes_project 2 7187936 7197359 + Gm13262 antisense antisense MGP_WSBEiJ_T0053747.1 MGP_WSBEiJ_G0025000.1 mouse_genomes_project 2 51679576 51726755 - MGP_WSBEiJ_P0053747 Stam2 protein_coding protein_coding MGP_WSBEiJ_T0053748.1 MGP_WSBEiJ_G0025000.1 mouse_genomes_project 2 51684930 51726836 - MGP_WSBEiJ_P0053748 Stam2 protein_coding protein_coding MGP_WSBEiJ_T0053749.1 MGP_WSBEiJ_G0025000.1 mouse_genomes_project 2 51694863 51726735 - Stam2 protein_coding retained_intron MGP_WSBEiJ_T0053750.1 MGP_WSBEiJ_G0025000.1 mouse_genomes_project 2 51695145 51726745 - MGP_WSBEiJ_P0053750 Stam2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053751.1 MGP_WSBEiJ_G0025000.1 mouse_genomes_project 2 51703211 51726711 - MGP_WSBEiJ_P0053751 Stam2 protein_coding protein_coding MGP_WSBEiJ_T0099351.1 MGP_WSBEiJ_G0038014.1 mouse_genomes_project 2 45380070 45380187 - Gm25264 snoRNA snoRNA MGP_WSBEiJ_T0003875.1 MGP_WSBEiJ_G0003460.1 mouse_genomes_project 2 31138536 31140519 + Gm13524 antisense antisense MGP_WSBEiJ_T0051371.1 MGP_WSBEiJ_G0024586.1 mouse_genomes_project 2 2068327 2084472 - Optn protein_coding processed_transcript MGP_WSBEiJ_T0051372.1 MGP_WSBEiJ_G0024586.1 mouse_genomes_project 2 2068327 2114550 - MGP_WSBEiJ_P0051372 Optn protein_coding protein_coding MGP_WSBEiJ_T0051373.1 MGP_WSBEiJ_G0024586.1 mouse_genomes_project 2 2068329 2114444 - MGP_WSBEiJ_P0051373 Optn protein_coding protein_coding MGP_WSBEiJ_T0051374.1 MGP_WSBEiJ_G0024586.1 mouse_genomes_project 2 2068986 2085772 - Optn protein_coding processed_transcript MGP_WSBEiJ_T0051375.1 MGP_WSBEiJ_G0024586.1 mouse_genomes_project 2 2095129 2114556 - Optn protein_coding processed_transcript MGP_WSBEiJ_T0054699.1 MGP_WSBEiJ_G0025200.1 mouse_genomes_project 2 86266544 86267483 + MGP_WSBEiJ_P0054699 Olfr1015 protein_coding protein_coding MGP_WSBEiJ_T0013477.1 MGP_WSBEiJ_G0011607.1 mouse_genomes_project 2 162266618 162266907 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099345.1 MGP_WSBEiJ_G0038008.1 mouse_genomes_project 2 31523807 31523944 - Gm23546 snoRNA snoRNA MGP_WSBEiJ_T0055665.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115061574 115468249 + MGP_WSBEiJ_P0055665 Fmn1 protein_coding protein_coding MGP_WSBEiJ_T0055666.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115061609 115238909 + Fmn1 protein_coding processed_transcript MGP_WSBEiJ_T0055667.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115061620 115461339 + MGP_WSBEiJ_P0055667 Fmn1 protein_coding protein_coding MGP_WSBEiJ_T0055668.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115099854 115461090 + MGP_WSBEiJ_P0055668 Fmn1 protein_coding protein_coding MGP_WSBEiJ_T0055669.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115183425 115461339 + MGP_WSBEiJ_P0055669 Fmn1 protein_coding protein_coding MGP_WSBEiJ_T0055670.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115432064 115442334 + Fmn1 protein_coding processed_transcript MGP_WSBEiJ_T0055671.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115432079 115461336 + Fmn1 protein_coding processed_transcript MGP_WSBEiJ_T0055672.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115432079 115461218 + Fmn1 protein_coding processed_transcript MGP_WSBEiJ_T0055673.1 MGP_WSBEiJ_G0025547.1 mouse_genomes_project 2 115460154 115461214 + Fmn1 protein_coding processed_transcript MGP_WSBEiJ_T0010197.1 MGP_WSBEiJ_G0008354.1 mouse_genomes_project 2 7825488 7825585 + Gm26092 miRNA miRNA MGP_WSBEiJ_T0051298.1 MGP_WSBEiJ_G0024575.1 mouse_genomes_project 2 424368 443585 - MGP_WSBEiJ_P0051298 Suv39h2 protein_coding protein_coding MGP_WSBEiJ_T0051299.1 MGP_WSBEiJ_G0024575.1 mouse_genomes_project 2 426133 443514 - MGP_WSBEiJ_P0051299 Suv39h2 protein_coding protein_coding MGP_WSBEiJ_T0051300.1 MGP_WSBEiJ_G0024575.1 mouse_genomes_project 2 426134 442973 - MGP_WSBEiJ_P0051300 Suv39h2 protein_coding protein_coding MGP_WSBEiJ_T0051301.1 MGP_WSBEiJ_G0024575.1 mouse_genomes_project 2 426156 443523 - MGP_WSBEiJ_P0051301 Suv39h2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055592.1 MGP_WSBEiJ_G0025500.1 mouse_genomes_project 2 112318393 112338144 + MGP_WSBEiJ_P0055592 Muc15 protein_coding protein_coding MGP_WSBEiJ_T0055593.1 MGP_WSBEiJ_G0025500.1 mouse_genomes_project 2 112318664 112338144 + MGP_WSBEiJ_P0055593 Muc15 protein_coding protein_coding MGP_WSBEiJ_T0055594.1 MGP_WSBEiJ_G0025500.1 mouse_genomes_project 2 112318701 112336201 + MGP_WSBEiJ_P0055594 Muc15 protein_coding protein_coding MGP_WSBEiJ_T0056918.1 MGP_WSBEiJ_G0025819.1 mouse_genomes_project 2 142655273 142738472 + MGP_WSBEiJ_P0056918 Ism1 protein_coding protein_coding MGP_WSBEiJ_T0056919.1 MGP_WSBEiJ_G0025819.1 mouse_genomes_project 2 142655273 142738473 + MGP_WSBEiJ_P0056919 Ism1 protein_coding protein_coding MGP_WSBEiJ_T0057264.1 MGP_WSBEiJ_G0025922.1 mouse_genomes_project 2 156125360 156133670 + MGP_WSBEiJ_P0057264 Rem1 protein_coding protein_coding MGP_WSBEiJ_T0057265.1 MGP_WSBEiJ_G0025922.1 mouse_genomes_project 2 156125362 156126768 + MGP_WSBEiJ_P0057265 Rem1 protein_coding protein_coding MGP_WSBEiJ_T0057266.1 MGP_WSBEiJ_G0025922.1 mouse_genomes_project 2 156131431 156133674 + Rem1 protein_coding retained_intron MGP_WSBEiJ_T0055603.1 MGP_WSBEiJ_G0025508.1 mouse_genomes_project 2 112938501 112939443 + MGP_WSBEiJ_P0055603 protein_coding protein_coding MGP_WSBEiJ_T0098117.1 MGP_WSBEiJ_G0036780.1 mouse_genomes_project 2 118874602 118874737 - Gm25514 snRNA snRNA MGP_WSBEiJ_T0098090.1 MGP_WSBEiJ_G0036753.1 mouse_genomes_project 2 22946745 22946850 + Gm22572 snRNA snRNA MGP_WSBEiJ_T0052747.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28319698 28337838 + MGP_WSBEiJ_P0052747 Phyhd1 protein_coding protein_coding MGP_WSBEiJ_T0052748.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320024 28337839 + MGP_WSBEiJ_P0052748 Phyhd1 protein_coding protein_coding MGP_WSBEiJ_T0052749.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320216 28337838 + MGP_WSBEiJ_P0052749 Phyhd1 protein_coding protein_coding MGP_WSBEiJ_T0052750.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320230 28336757 + MGP_WSBEiJ_P0052750 Phyhd1 protein_coding protein_coding MGP_WSBEiJ_T0052751.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320314 28335936 + MGP_WSBEiJ_P0052751 Phyhd1 protein_coding protein_coding MGP_WSBEiJ_T0052752.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320344 28337827 + MGP_WSBEiJ_P0052752 Phyhd1 protein_coding protein_coding MGP_WSBEiJ_T0052753.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320346 28335217 + Phyhd1 protein_coding processed_transcript MGP_WSBEiJ_T0052754.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320351 28336805 + MGP_WSBEiJ_P0052754 Phyhd1 protein_coding protein_coding MGP_WSBEiJ_T0052755.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320358 28337788 + MGP_WSBEiJ_P0052755 Phyhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052756.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28320358 28337788 + MGP_WSBEiJ_P0052756 Phyhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052757.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28332701 28337830 + MGP_WSBEiJ_P0052757 Phyhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052758.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28335321 28337544 + Phyhd1 protein_coding retained_intron MGP_WSBEiJ_T0052759.1 MGP_WSBEiJ_G0024826.1 mouse_genomes_project 2 28335368 28336201 + Phyhd1 protein_coding retained_intron MGP_WSBEiJ_T0003930.1 MGP_WSBEiJ_G0003502.1 mouse_genomes_project 2 73214559 73223386 + Gm13703 antisense antisense MGP_WSBEiJ_T0099327.1 MGP_WSBEiJ_G0037990.1 mouse_genomes_project 2 7367892 7368020 - Gm23608 snoRNA snoRNA MGP_WSBEiJ_T0054859.1 MGP_WSBEiJ_G0025342.1 mouse_genomes_project 2 90078447 90079419 - MGP_WSBEiJ_P0054859 Olfr1228 protein_coding protein_coding MGP_WSBEiJ_T0053419.1 MGP_WSBEiJ_G0024923.1 mouse_genomes_project 2 34494914 34507961 - MGP_WSBEiJ_P0053419 Ndufa8 protein_coding protein_coding MGP_WSBEiJ_T0055956.1 MGP_WSBEiJ_G0025614.1 mouse_genomes_project 2 122372846 122385456 - Pla2g4f protein_coding retained_intron MGP_WSBEiJ_T0055957.1 MGP_WSBEiJ_G0025614.1 mouse_genomes_project 2 122372855 122387271 - MGP_WSBEiJ_P0055957 Pla2g4f protein_coding protein_coding MGP_WSBEiJ_T0056562.1 MGP_WSBEiJ_G0025742.1 mouse_genomes_project 2 131955501 131963394 - MGP_WSBEiJ_P0056562 Il1b protein_coding protein_coding MGP_WSBEiJ_T0056563.1 MGP_WSBEiJ_G0025742.1 mouse_genomes_project 2 131956054 131958295 - Il1b protein_coding processed_transcript MGP_WSBEiJ_T0056564.1 MGP_WSBEiJ_G0025742.1 mouse_genomes_project 2 131960672 131963394 - Il1b protein_coding retained_intron MGP_WSBEiJ_T0052329.1 MGP_WSBEiJ_G0024754.1 mouse_genomes_project 2 24240516 24243502 - MGP_WSBEiJ_P0052329 Inpp5e protein_coding protein_coding MGP_WSBEiJ_T0052330.1 MGP_WSBEiJ_G0024754.1 mouse_genomes_project 2 24241054 24254222 - Inpp5e protein_coding processed_transcript MGP_WSBEiJ_T0052331.1 MGP_WSBEiJ_G0024754.1 mouse_genomes_project 2 24241297 24254241 - Inpp5e protein_coding processed_transcript MGP_WSBEiJ_T0052332.1 MGP_WSBEiJ_G0024754.1 mouse_genomes_project 2 24241839 24253625 - MGP_WSBEiJ_P0052332 Inpp5e protein_coding protein_coding MGP_WSBEiJ_T0052333.1 MGP_WSBEiJ_G0024754.1 mouse_genomes_project 2 24243290 24244507 - Inpp5e protein_coding processed_transcript MGP_WSBEiJ_T0052334.1 MGP_WSBEiJ_G0024754.1 mouse_genomes_project 2 24243443 24246237 - MGP_WSBEiJ_P0052334 Inpp5e protein_coding protein_coding MGP_WSBEiJ_T0056240.1 MGP_WSBEiJ_G0025661.1 mouse_genomes_project 2 124396204 124416633 + MGP_WSBEiJ_P0056240 Terb2 protein_coding protein_coding MGP_WSBEiJ_T0056241.1 MGP_WSBEiJ_G0025661.1 mouse_genomes_project 2 124396406 124415199 + Terb2 protein_coding processed_transcript MGP_WSBEiJ_T0007254.1 MGP_WSBEiJ_G0005950.1 mouse_genomes_project 2 158784702 158786992 - 2310005A03Rik lincRNA lincRNA MGP_WSBEiJ_T0057255.1 MGP_WSBEiJ_G0025914.1 mouse_genomes_project 2 156011456 156014645 + MGP_WSBEiJ_P0057255 Defb28 protein_coding protein_coding MGP_WSBEiJ_T0013085.1 MGP_WSBEiJ_G0011215.1 mouse_genomes_project 2 12178366 12178701 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056852.1 MGP_WSBEiJ_G0025804.1 mouse_genomes_project 2 135635327 135685428 - Fermt1 protein_coding retained_intron MGP_WSBEiJ_T0056853.1 MGP_WSBEiJ_G0025804.1 mouse_genomes_project 2 135635327 135685705 - MGP_WSBEiJ_P0056853 Fermt1 protein_coding protein_coding MGP_WSBEiJ_T0056854.1 MGP_WSBEiJ_G0025804.1 mouse_genomes_project 2 135674129 135680181 - Fermt1 protein_coding processed_transcript MGP_WSBEiJ_T0056855.1 MGP_WSBEiJ_G0025804.1 mouse_genomes_project 2 135677112 135680047 - Fermt1 protein_coding processed_transcript MGP_WSBEiJ_T0007295.1 MGP_WSBEiJ_G0005985.1 mouse_genomes_project 2 172753852 172759954 - Gm14262 lincRNA lincRNA MGP_WSBEiJ_T0003992.1 MGP_WSBEiJ_G0003544.1 mouse_genomes_project 2 127684058 127686664 + A530010F05Rik antisense antisense MGP_WSBEiJ_T0010237.1 MGP_WSBEiJ_G0008394.1 mouse_genomes_project 2 30922446 30922532 + Mir1954 miRNA miRNA MGP_WSBEiJ_T0057205.1 MGP_WSBEiJ_G0025894.1 mouse_genomes_project 2 155161558 155191152 - MGP_WSBEiJ_P0057205 Psmf1 protein_coding protein_coding MGP_WSBEiJ_T0057206.1 MGP_WSBEiJ_G0025894.1 mouse_genomes_project 2 155161808 155168410 - Psmf1 protein_coding retained_intron MGP_WSBEiJ_T0057207.1 MGP_WSBEiJ_G0025894.1 mouse_genomes_project 2 155161808 155191135 - MGP_WSBEiJ_P0057207 Psmf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057208.1 MGP_WSBEiJ_G0025894.1 mouse_genomes_project 2 155164011 155194028 - MGP_WSBEiJ_P0057208 Psmf1 protein_coding protein_coding MGP_WSBEiJ_T0057209.1 MGP_WSBEiJ_G0025894.1 mouse_genomes_project 2 155165231 155178317 - Psmf1 protein_coding retained_intron MGP_WSBEiJ_T0057210.1 MGP_WSBEiJ_G0025894.1 mouse_genomes_project 2 155175839 155191135 - Psmf1 protein_coding retained_intron MGP_WSBEiJ_T0099355.1 MGP_WSBEiJ_G0038018.1 mouse_genomes_project 2 53598823 53598962 - Gm24549 snoRNA snoRNA MGP_WSBEiJ_T0054443.1 MGP_WSBEiJ_G0025135.1 mouse_genomes_project 2 77190730 77288229 - MGP_WSBEiJ_P0054443 Sestd1 protein_coding protein_coding MGP_WSBEiJ_T0054444.1 MGP_WSBEiJ_G0025135.1 mouse_genomes_project 2 77201064 77203607 - Sestd1 protein_coding processed_transcript MGP_WSBEiJ_T0054445.1 MGP_WSBEiJ_G0025135.1 mouse_genomes_project 2 77201066 77288226 - Sestd1 protein_coding processed_transcript MGP_WSBEiJ_T0013323.1 MGP_WSBEiJ_G0011453.1 mouse_genomes_project 2 101524712 101525499 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056040.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122805126 122821751 - MGP_WSBEiJ_P0056040 Cdan1 protein_coding protein_coding MGP_WSBEiJ_T0056041.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122805482 122821752 - MGP_WSBEiJ_P0056041 Cdan1 protein_coding protein_coding MGP_WSBEiJ_T0056042.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122807141 122932758 - Cdan1 protein_coding processed_transcript MGP_WSBEiJ_T0056043.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122807576 122809468 - Cdan1 protein_coding processed_transcript MGP_WSBEiJ_T0056044.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122812616 122814689 - Cdan1 protein_coding retained_intron MGP_WSBEiJ_T0056045.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122815844 122818211 - Cdan1 protein_coding retained_intron MGP_WSBEiJ_T0056046.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122818151 122818872 - Cdan1 protein_coding retained_intron MGP_WSBEiJ_T0056047.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122818861 122821740 - Cdan1 protein_coding processed_transcript MGP_WSBEiJ_T0056048.1 MGP_WSBEiJ_G0025624.1 mouse_genomes_project 2 122820175 122821724 - Cdan1 protein_coding processed_transcript MGP_WSBEiJ_T0007278.1 MGP_WSBEiJ_G0005972.1 mouse_genomes_project 2 170483135 170484205 - Gm11466 lincRNA lincRNA MGP_WSBEiJ_T0054566.1 MGP_WSBEiJ_G0025159.1 mouse_genomes_project 2 84717351 84820660 - MGP_WSBEiJ_P0054566 Calcrl protein_coding protein_coding MGP_WSBEiJ_T0054567.1 MGP_WSBEiJ_G0025159.1 mouse_genomes_project 2 84717384 84766520 - MGP_WSBEiJ_P0054567 Calcrl protein_coding protein_coding MGP_WSBEiJ_T0054568.1 MGP_WSBEiJ_G0025159.1 mouse_genomes_project 2 84766456 84820515 - Calcrl protein_coding processed_transcript MGP_WSBEiJ_T0057203.1 MGP_WSBEiJ_G0025893.1 mouse_genomes_project 2 155144356 155150461 + MGP_WSBEiJ_P0057203 Tmem74b protein_coding protein_coding MGP_WSBEiJ_T0057204.1 MGP_WSBEiJ_G0025893.1 mouse_genomes_project 2 155144659 155155415 + MGP_WSBEiJ_P0057204 Tmem74b protein_coding protein_coding MGP_WSBEiJ_T0004094.1 MGP_WSBEiJ_G0003621.1 mouse_genomes_project 2 175249731 175252105 + Gm14637 antisense antisense MGP_WSBEiJ_T0057992.1 MGP_WSBEiJ_G0026071.1 mouse_genomes_project 2 167546344 167552777 - MGP_WSBEiJ_P0057992 Fitm2 protein_coding protein_coding MGP_WSBEiJ_T0052310.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24226802 24233317 - MGP_WSBEiJ_P0052310 Sdccag3 protein_coding protein_coding MGP_WSBEiJ_T0052311.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24226802 24233292 - MGP_WSBEiJ_P0052311 Sdccag3 protein_coding protein_coding MGP_WSBEiJ_T0052312.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24226802 24233298 - MGP_WSBEiJ_P0052312 Sdccag3 protein_coding protein_coding MGP_WSBEiJ_T0052313.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24226802 24233305 - MGP_WSBEiJ_P0052313 Sdccag3 protein_coding protein_coding MGP_WSBEiJ_T0052314.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24226803 24231582 - Sdccag3 protein_coding processed_transcript MGP_WSBEiJ_T0052315.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24227555 24229214 - Sdccag3 protein_coding processed_transcript MGP_WSBEiJ_T0052316.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24227564 24229610 - Sdccag3 protein_coding processed_transcript MGP_WSBEiJ_T0052317.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24230655 24233284 - Sdccag3 protein_coding processed_transcript MGP_WSBEiJ_T0052318.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24230655 24233307 - Sdccag3 protein_coding processed_transcript MGP_WSBEiJ_T0052319.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24231013 24233296 - Sdccag3 protein_coding processed_transcript MGP_WSBEiJ_T0052320.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24231105 24232695 - MGP_WSBEiJ_P0052320 Sdccag3 protein_coding protein_coding MGP_WSBEiJ_T0052321.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24231126 24233268 - Sdccag3 protein_coding processed_transcript MGP_WSBEiJ_T0052322.1 MGP_WSBEiJ_G0024752.1 mouse_genomes_project 2 24231556 24233166 - Sdccag3 protein_coding processed_transcript MGP_WSBEiJ_T0013347.1 MGP_WSBEiJ_G0011477.1 mouse_genomes_project 2 108474018 108474516 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056832.1 MGP_WSBEiJ_G0025798.1 mouse_genomes_project 2 135402536 135477683 + MGP_WSBEiJ_P0056832 1110034G24Rik protein_coding protein_coding MGP_WSBEiJ_T0056833.1 MGP_WSBEiJ_G0025798.1 mouse_genomes_project 2 135405761 135477131 + MGP_WSBEiJ_P0056833 1110034G24Rik protein_coding protein_coding MGP_WSBEiJ_T0056834.1 MGP_WSBEiJ_G0025798.1 mouse_genomes_project 2 135405887 135477683 + MGP_WSBEiJ_P0056834 1110034G24Rik protein_coding protein_coding MGP_WSBEiJ_T0056835.1 MGP_WSBEiJ_G0025798.1 mouse_genomes_project 2 135417045 135477210 + 1110034G24Rik protein_coding processed_transcript MGP_WSBEiJ_T0054068.1 MGP_WSBEiJ_G0025057.1 mouse_genomes_project 2 68423182 68680168 + MGP_WSBEiJ_P0054068 Cers6 protein_coding protein_coding MGP_WSBEiJ_T0054069.1 MGP_WSBEiJ_G0025057.1 mouse_genomes_project 2 68423183 68424466 + Cers6 protein_coding retained_intron MGP_WSBEiJ_T0054070.1 MGP_WSBEiJ_G0025057.1 mouse_genomes_project 2 68423191 68637581 + Cers6 protein_coding retained_intron MGP_WSBEiJ_T0054071.1 MGP_WSBEiJ_G0025057.1 mouse_genomes_project 2 68423211 68494690 + Cers6 protein_coding retained_intron MGP_WSBEiJ_T0054072.1 MGP_WSBEiJ_G0025057.1 mouse_genomes_project 2 68423327 68674582 + MGP_WSBEiJ_P0054072 Cers6 protein_coding protein_coding MGP_WSBEiJ_T0054073.1 MGP_WSBEiJ_G0025057.1 mouse_genomes_project 2 68507891 68617106 + Cers6 protein_coding retained_intron MGP_WSBEiJ_T0054074.1 MGP_WSBEiJ_G0025057.1 mouse_genomes_project 2 68521476 68617462 + Cers6 protein_coding retained_intron MGP_WSBEiJ_T0052835.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28918765 28927631 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052836.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919297 28925703 - MGP_WSBEiJ_P0052836 1700001O22Rik protein_coding protein_coding MGP_WSBEiJ_T0052837.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919464 28920661 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052838.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919559 28927657 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052839.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919562 28927640 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052840.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919569 28924997 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052841.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919576 28927653 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052842.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919600 28927639 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052843.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919653 28927640 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052844.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28919670 28920872 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052845.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28920104 28927640 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052846.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28920178 28927640 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0052847.1 MGP_WSBEiJ_G0024837.1 mouse_genomes_project 2 28921249 28927619 - 1700001O22Rik protein_coding processed_transcript MGP_WSBEiJ_T0053739.1 MGP_WSBEiJ_G0024998.1 mouse_genomes_project 2 51365363 51394390 - MGP_WSBEiJ_P0053739 Arl5a protein_coding protein_coding MGP_WSBEiJ_T0053740.1 MGP_WSBEiJ_G0024998.1 mouse_genomes_project 2 51369805 51381194 - Arl5a protein_coding retained_intron MGP_WSBEiJ_T0007249.1 MGP_WSBEiJ_G0005946.1 mouse_genomes_project 2 155198558 155200959 - 4930556L07Rik lincRNA lincRNA MGP_WSBEiJ_T0013258.1 MGP_WSBEiJ_G0011388.1 mouse_genomes_project 2 78821644 78822925 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058240.1 MGP_WSBEiJ_G0026145.1 mouse_genomes_project 2 169829561 170025664 + MGP_WSBEiJ_P0058240 Eya2 protein_coding protein_coding MGP_WSBEiJ_T0058241.1 MGP_WSBEiJ_G0026145.1 mouse_genomes_project 2 169896283 170025672 + MGP_WSBEiJ_P0058241 Eya2 protein_coding protein_coding MGP_WSBEiJ_T0058242.1 MGP_WSBEiJ_G0026145.1 mouse_genomes_project 2 169896303 169961187 + Eya2 protein_coding processed_transcript MGP_WSBEiJ_T0058243.1 MGP_WSBEiJ_G0026145.1 mouse_genomes_project 2 169957181 170017029 + Eya2 protein_coding processed_transcript MGP_WSBEiJ_T0058244.1 MGP_WSBEiJ_G0026145.1 mouse_genomes_project 2 170012618 170017886 + Eya2 protein_coding processed_transcript MGP_WSBEiJ_T0058245.1 MGP_WSBEiJ_G0026145.1 mouse_genomes_project 2 170019995 170025207 + Eya2 protein_coding processed_transcript MGP_WSBEiJ_T0055605.1 MGP_WSBEiJ_G0025510.1 mouse_genomes_project 2 112975592 112976647 + MGP_WSBEiJ_P0055605 protein_coding protein_coding MGP_WSBEiJ_T0007176.1 MGP_WSBEiJ_G0005886.1 mouse_genomes_project 2 105227956 105236250 + Gm13881 lincRNA lincRNA MGP_WSBEiJ_T0007133.1 MGP_WSBEiJ_G0005852.1 mouse_genomes_project 2 74645074 74645717 + Gm14426 lincRNA lincRNA MGP_WSBEiJ_T0054629.1 MGP_WSBEiJ_G0025171.1 mouse_genomes_project 2 85173215 85183909 - MGP_WSBEiJ_P0054629 Serping1 protein_coding protein_coding MGP_WSBEiJ_T0054630.1 MGP_WSBEiJ_G0025171.1 mouse_genomes_project 2 85173334 85183949 - MGP_WSBEiJ_P0054630 Serping1 protein_coding protein_coding MGP_WSBEiJ_T0054631.1 MGP_WSBEiJ_G0025171.1 mouse_genomes_project 2 85180739 85182737 - Serping1 protein_coding processed_transcript MGP_WSBEiJ_T0007099.1 MGP_WSBEiJ_G0005824.1 mouse_genomes_project 2 51852398 51856173 - Gm26603 lincRNA lincRNA MGP_WSBEiJ_T0054765.1 MGP_WSBEiJ_G0025263.1 mouse_genomes_project 2 87806886 87807843 + MGP_WSBEiJ_P0054765 Olfr1112 protein_coding protein_coding MGP_WSBEiJ_T0003982.1 MGP_WSBEiJ_G0003534.1 mouse_genomes_project 2 118736817 118766729 - Gm13990 antisense antisense MGP_WSBEiJ_T0057274.1 MGP_WSBEiJ_G0025925.1 mouse_genomes_project 2 156240842 156242001 + MGP_WSBEiJ_P0057274 Id1 protein_coding protein_coding MGP_WSBEiJ_T0057275.1 MGP_WSBEiJ_G0025925.1 mouse_genomes_project 2 156240842 156242001 + MGP_WSBEiJ_P0057275 Id1 protein_coding protein_coding MGP_WSBEiJ_T0007149.1 MGP_WSBEiJ_G0005866.1 mouse_genomes_project 2 85656840 85666567 + Gm13715 lincRNA lincRNA MGP_WSBEiJ_T0058802.1 MGP_WSBEiJ_G0026271.1 mouse_genomes_project 2 186597193 186676589 - MGP_WSBEiJ_P0058802 Zbtb46 protein_coding protein_coding MGP_WSBEiJ_T0058803.1 MGP_WSBEiJ_G0026271.1 mouse_genomes_project 2 186600321 186636898 - MGP_WSBEiJ_P0058803 Zbtb46 protein_coding protein_coding MGP_WSBEiJ_T0058804.1 MGP_WSBEiJ_G0026271.1 mouse_genomes_project 2 186622011 186676589 - MGP_WSBEiJ_P0058804 Zbtb46 protein_coding protein_coding MGP_WSBEiJ_T0058805.1 MGP_WSBEiJ_G0026271.1 mouse_genomes_project 2 186634047 186676589 - Zbtb46 protein_coding retained_intron MGP_WSBEiJ_T0058806.1 MGP_WSBEiJ_G0026271.1 mouse_genomes_project 2 186636737 186676568 - MGP_WSBEiJ_P0058806 Zbtb46 protein_coding protein_coding MGP_WSBEiJ_T0013348.1 MGP_WSBEiJ_G0011478.1 mouse_genomes_project 2 108486213 108487247 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053107.1 MGP_WSBEiJ_G0024875.1 mouse_genomes_project 2 30838254 30840964 + MGP_WSBEiJ_P0053107 Dpm2 protein_coding protein_coding MGP_WSBEiJ_T0053108.1 MGP_WSBEiJ_G0024875.1 mouse_genomes_project 2 30838254 30840948 + MGP_WSBEiJ_P0053108 Dpm2 protein_coding protein_coding MGP_WSBEiJ_T0053109.1 MGP_WSBEiJ_G0024875.1 mouse_genomes_project 2 30838263 30840466 + Dpm2 protein_coding retained_intron MGP_WSBEiJ_T0053110.1 MGP_WSBEiJ_G0024875.1 mouse_genomes_project 2 30839431 30840841 + Dpm2 protein_coding retained_intron MGP_WSBEiJ_T0058710.1 MGP_WSBEiJ_G0026256.1 mouse_genomes_project 2 186220371 186240730 - MGP_WSBEiJ_P0058710 Chrna4 protein_coding protein_coding MGP_WSBEiJ_T0058711.1 MGP_WSBEiJ_G0026256.1 mouse_genomes_project 2 186220372 186230342 - MGP_WSBEiJ_P0058711 Chrna4 protein_coding protein_coding MGP_WSBEiJ_T0058712.1 MGP_WSBEiJ_G0026256.1 mouse_genomes_project 2 186224313 186240960 - MGP_WSBEiJ_P0058712 Chrna4 protein_coding protein_coding MGP_WSBEiJ_T0058713.1 MGP_WSBEiJ_G0026256.1 mouse_genomes_project 2 186231438 186240880 - Chrna4 protein_coding processed_transcript MGP_WSBEiJ_T0058714.1 MGP_WSBEiJ_G0026256.1 mouse_genomes_project 2 186236037 186245172 - MGP_WSBEiJ_P0058714 Chrna4 protein_coding protein_coding MGP_WSBEiJ_T0058363.1 MGP_WSBEiJ_G0026164.1 mouse_genomes_project 2 171938275 171942923 + MGP_WSBEiJ_P0058363 Snai1 protein_coding protein_coding MGP_WSBEiJ_T0003895.1 MGP_WSBEiJ_G0003476.1 mouse_genomes_project 2 43810036 43813865 + Zeb2os antisense antisense MGP_WSBEiJ_T0003896.1 MGP_WSBEiJ_G0003476.1 mouse_genomes_project 2 43811124 43813865 + Zeb2os antisense antisense MGP_WSBEiJ_T0098122.1 MGP_WSBEiJ_G0036785.1 mouse_genomes_project 2 129071414 129071563 - Gm23753 snRNA snRNA MGP_WSBEiJ_T0054176.1 MGP_WSBEiJ_G0025080.1 mouse_genomes_project 2 70401911 70516797 - Tlk1 protein_coding processed_transcript MGP_WSBEiJ_T0054177.1 MGP_WSBEiJ_G0025080.1 mouse_genomes_project 2 70401911 70517128 - MGP_WSBEiJ_P0054177 Tlk1 protein_coding protein_coding MGP_WSBEiJ_T0054178.1 MGP_WSBEiJ_G0025080.1 mouse_genomes_project 2 70403645 70407725 - Tlk1 protein_coding processed_transcript MGP_WSBEiJ_T0054179.1 MGP_WSBEiJ_G0025080.1 mouse_genomes_project 2 70405813 70407405 - Tlk1 protein_coding processed_transcript MGP_WSBEiJ_T0054180.1 MGP_WSBEiJ_G0025080.1 mouse_genomes_project 2 70436755 70516723 - Tlk1 protein_coding processed_transcript MGP_WSBEiJ_T0054181.1 MGP_WSBEiJ_G0025080.1 mouse_genomes_project 2 70439984 70516711 - Tlk1 protein_coding processed_transcript MGP_WSBEiJ_T0054182.1 MGP_WSBEiJ_G0025080.1 mouse_genomes_project 2 70441729 70516628 - Tlk1 protein_coding processed_transcript MGP_WSBEiJ_T0054726.1 MGP_WSBEiJ_G0025226.1 mouse_genomes_project 2 86858988 86859927 - MGP_WSBEiJ_P0054726 Olfr1054 protein_coding protein_coding MGP_WSBEiJ_T0053189.1 MGP_WSBEiJ_G0024889.1 mouse_genomes_project 2 31064802 31071852 - MGP_WSBEiJ_P0053189 Cfap157 protein_coding protein_coding MGP_WSBEiJ_T0053190.1 MGP_WSBEiJ_G0024889.1 mouse_genomes_project 2 31065636 31066566 - Cfap157 protein_coding retained_intron MGP_WSBEiJ_T0054850.1 MGP_WSBEiJ_G0025334.1 mouse_genomes_project 2 89906919 89907855 - MGP_WSBEiJ_P0054850 Olfr1218 protein_coding protein_coding MGP_WSBEiJ_T0098123.1 MGP_WSBEiJ_G0036786.1 mouse_genomes_project 2 130608230 130608367 + Gm23101 snRNA snRNA MGP_WSBEiJ_T0099384.1 MGP_WSBEiJ_G0038047.1 mouse_genomes_project 2 132889635 132889768 + Gm24451 snoRNA snoRNA MGP_WSBEiJ_T0001060.1 MGP_WSBEiJ_G0000995.1 mouse_genomes_project 2 117923365 117924298 - TEC TEC MGP_WSBEiJ_T0054755.1 MGP_WSBEiJ_G0025253.1 mouse_genomes_project 2 87581842 87582775 - MGP_WSBEiJ_P0054755 Olfr1101 protein_coding protein_coding MGP_WSBEiJ_T0052500.1 MGP_WSBEiJ_G0024785.1 mouse_genomes_project 2 26119491 26140795 + Olfm1 protein_coding processed_transcript MGP_WSBEiJ_T0052501.1 MGP_WSBEiJ_G0024785.1 mouse_genomes_project 2 26119491 26156552 + MGP_WSBEiJ_P0052501 Olfm1 protein_coding protein_coding MGP_WSBEiJ_T0052502.1 MGP_WSBEiJ_G0024785.1 mouse_genomes_project 2 26119592 26156826 + MGP_WSBEiJ_P0052502 Olfm1 protein_coding protein_coding MGP_WSBEiJ_T0052503.1 MGP_WSBEiJ_G0024785.1 mouse_genomes_project 2 26132037 26140795 + MGP_WSBEiJ_P0052503 Olfm1 protein_coding protein_coding MGP_WSBEiJ_T0052504.1 MGP_WSBEiJ_G0024785.1 mouse_genomes_project 2 26132037 26156826 + MGP_WSBEiJ_P0052504 Olfm1 protein_coding protein_coding MGP_WSBEiJ_T0007216.1 MGP_WSBEiJ_G0005919.1 mouse_genomes_project 2 130759742 130761693 - Gm14012 lincRNA lincRNA MGP_WSBEiJ_T0058215.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169511786 169545895 - MGP_WSBEiJ_P0058215 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0058216.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169512910 169522004 - MGP_WSBEiJ_P0058216 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0058217.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169512910 169551548 - MGP_WSBEiJ_P0058217 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0058218.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169512910 169551548 - MGP_WSBEiJ_P0058218 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0058219.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169514867 169551548 - MGP_WSBEiJ_P0058219 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0058220.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169514872 169541972 - MGP_WSBEiJ_P0058220 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0058221.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169523305 169539375 - Elmo2 protein_coding processed_transcript MGP_WSBEiJ_T0058222.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169523694 169536781 - MGP_WSBEiJ_P0058222 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0058223.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169529718 169536671 - Elmo2 protein_coding retained_intron MGP_WSBEiJ_T0058224.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169533941 169541420 - MGP_WSBEiJ_P0058224 Elmo2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058225.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169536708 169541644 - MGP_WSBEiJ_P0058225 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0058226.1 MGP_WSBEiJ_G0026139.1 mouse_genomes_project 2 169540740 169551548 - MGP_WSBEiJ_P0058226 Elmo2 protein_coding protein_coding MGP_WSBEiJ_T0057039.1 MGP_WSBEiJ_G0025848.1 mouse_genomes_project 2 149108164 149121225 + MGP_WSBEiJ_P0057039 Naa20 protein_coding protein_coding MGP_WSBEiJ_T0057040.1 MGP_WSBEiJ_G0025848.1 mouse_genomes_project 2 149108176 149120351 + MGP_WSBEiJ_P0057040 Naa20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057041.1 MGP_WSBEiJ_G0025848.1 mouse_genomes_project 2 149108180 149120357 + MGP_WSBEiJ_P0057041 Naa20 protein_coding protein_coding MGP_WSBEiJ_T0057042.1 MGP_WSBEiJ_G0025848.1 mouse_genomes_project 2 149108185 149120431 + MGP_WSBEiJ_P0057042 Naa20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057043.1 MGP_WSBEiJ_G0025848.1 mouse_genomes_project 2 149108217 149115189 + MGP_WSBEiJ_P0057043 Naa20 protein_coding protein_coding MGP_WSBEiJ_T0057044.1 MGP_WSBEiJ_G0025848.1 mouse_genomes_project 2 149108220 149116794 + Naa20 protein_coding retained_intron MGP_WSBEiJ_T0057045.1 MGP_WSBEiJ_G0025848.1 mouse_genomes_project 2 149108233 149120689 + MGP_WSBEiJ_P0057045 Naa20 protein_coding protein_coding MGP_WSBEiJ_T0057046.1 MGP_WSBEiJ_G0025848.1 mouse_genomes_project 2 149116684 149120534 + Naa20 protein_coding retained_intron MGP_WSBEiJ_T0100703.1 MGP_WSBEiJ_G0039161.1 mouse_genomes_project 2 86123706 86124429 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0017192.1 MGP_WSBEiJ_G0014845.1 mouse_genomes_project 2 69509133 69509898 - Gm13625 processed_transcript processed_transcript MGP_WSBEiJ_T0054023.1 MGP_WSBEiJ_G0025046.1 mouse_genomes_project 2 65511619 65556897 - MGP_WSBEiJ_P0054023 Galnt3 protein_coding protein_coding MGP_WSBEiJ_T0054024.1 MGP_WSBEiJ_G0025046.1 mouse_genomes_project 2 65512939 65524711 - Galnt3 protein_coding processed_transcript MGP_WSBEiJ_T0054025.1 MGP_WSBEiJ_G0025046.1 mouse_genomes_project 2 65520635 65523554 - Galnt3 protein_coding processed_transcript MGP_WSBEiJ_T0054026.1 MGP_WSBEiJ_G0025046.1 mouse_genomes_project 2 65525126 65531906 - Galnt3 protein_coding processed_transcript MGP_WSBEiJ_T0013248.1 MGP_WSBEiJ_G0011378.1 mouse_genomes_project 2 73849745 73850746 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053678.1 MGP_WSBEiJ_G0024986.1 mouse_genomes_project 2 48289832 48386315 + MGP_WSBEiJ_P0053678 Epc2 protein_coding protein_coding MGP_WSBEiJ_T0053679.1 MGP_WSBEiJ_G0024986.1 mouse_genomes_project 2 48362429 48371438 + MGP_WSBEiJ_P0053679 Epc2 protein_coding protein_coding MGP_WSBEiJ_T0007315.1 MGP_WSBEiJ_G0006002.1 mouse_genomes_project 2 176759290 176766920 - Gm14641 lincRNA lincRNA MGP_WSBEiJ_T0017293.1 MGP_WSBEiJ_G0014899.1 mouse_genomes_project 2 154098237 154099679 + E130215H24Rik processed_transcript processed_transcript MGP_WSBEiJ_T0053325.1 MGP_WSBEiJ_G0024908.1 mouse_genomes_project 2 33238557 33260200 - MGP_WSBEiJ_P0053325 Psmd5 protein_coding protein_coding MGP_WSBEiJ_T0053326.1 MGP_WSBEiJ_G0024908.1 mouse_genomes_project 2 33240920 33260171 - Psmd5 protein_coding retained_intron MGP_WSBEiJ_T0053327.1 MGP_WSBEiJ_G0024908.1 mouse_genomes_project 2 33241261 33246512 - MGP_WSBEiJ_P0053327 Psmd5 protein_coding protein_coding MGP_WSBEiJ_T0053328.1 MGP_WSBEiJ_G0024908.1 mouse_genomes_project 2 33256178 33265780 - Psmd5 protein_coding processed_transcript MGP_WSBEiJ_T0053329.1 MGP_WSBEiJ_G0024908.1 mouse_genomes_project 2 33260345 33261449 - Psmd5 protein_coding processed_transcript MGP_WSBEiJ_T0000997.1 MGP_WSBEiJ_G0000932.1 mouse_genomes_project 2 8547919 8550491 + TEC TEC MGP_WSBEiJ_T0054748.1 MGP_WSBEiJ_G0025247.1 mouse_genomes_project 2 87438842 87440080 - MGP_WSBEiJ_P0054748 protein_coding protein_coding MGP_WSBEiJ_T0054804.1 MGP_WSBEiJ_G0025292.1 mouse_genomes_project 2 88587105 88588131 - MGP_WSBEiJ_P0054804 Olfr1154 protein_coding protein_coding MGP_WSBEiJ_T0013367.1 MGP_WSBEiJ_G0011497.1 mouse_genomes_project 2 116471760 116472542 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058543.1 MGP_WSBEiJ_G0026215.1 mouse_genomes_project 2 179362318 179374058 + MGP_WSBEiJ_P0058543 Nelfcd protein_coding protein_coding MGP_WSBEiJ_T0058544.1 MGP_WSBEiJ_G0026215.1 mouse_genomes_project 2 179362365 179374058 + MGP_WSBEiJ_P0058544 Nelfcd protein_coding protein_coding MGP_WSBEiJ_T0058545.1 MGP_WSBEiJ_G0026215.1 mouse_genomes_project 2 179362394 179369217 + Nelfcd protein_coding processed_transcript MGP_WSBEiJ_T0058546.1 MGP_WSBEiJ_G0026215.1 mouse_genomes_project 2 179369936 179371468 + Nelfcd protein_coding retained_intron MGP_WSBEiJ_T0058547.1 MGP_WSBEiJ_G0026215.1 mouse_genomes_project 2 179371234 179372504 + Nelfcd protein_coding retained_intron MGP_WSBEiJ_T0058548.1 MGP_WSBEiJ_G0026215.1 mouse_genomes_project 2 179372917 179373953 + Nelfcd protein_coding retained_intron MGP_WSBEiJ_T0056492.1 MGP_WSBEiJ_G0025722.1 mouse_genomes_project 2 130297275 130298379 - MGP_WSBEiJ_P0056492 1500011K16Rik protein_coding protein_coding MGP_WSBEiJ_T0054911.1 MGP_WSBEiJ_G0025375.1 mouse_genomes_project 2 90915146 90917549 - MGP_WSBEiJ_P0054911 protein_coding protein_coding MGP_WSBEiJ_T0007288.1 MGP_WSBEiJ_G0005979.1 mouse_genomes_project 2 172197424 172202527 + Gm14321 lincRNA lincRNA MGP_WSBEiJ_T0007289.1 MGP_WSBEiJ_G0005979.1 mouse_genomes_project 2 172197493 172202084 + Gm14321 lincRNA lincRNA MGP_WSBEiJ_T0010253.1 MGP_WSBEiJ_G0008410.1 mouse_genomes_project 2 64758896 64759001 - Mir6337 miRNA miRNA MGP_WSBEiJ_T0054671.1 MGP_WSBEiJ_G0025182.1 mouse_genomes_project 2 85474206 85478268 + Tnks1bp1 protein_coding processed_transcript MGP_WSBEiJ_T0054672.1 MGP_WSBEiJ_G0025182.1 mouse_genomes_project 2 85474239 85499153 + Tnks1bp1 protein_coding processed_transcript MGP_WSBEiJ_T0054673.1 MGP_WSBEiJ_G0025182.1 mouse_genomes_project 2 85474250 85490190 + MGP_WSBEiJ_P0054673 Tnks1bp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0054674.1 MGP_WSBEiJ_G0025182.1 mouse_genomes_project 2 85476594 85478186 + Tnks1bp1 protein_coding processed_transcript MGP_WSBEiJ_T0054675.1 MGP_WSBEiJ_G0025182.1 mouse_genomes_project 2 85476594 85499157 + MGP_WSBEiJ_P0054675 Tnks1bp1 protein_coding protein_coding MGP_WSBEiJ_T0054676.1 MGP_WSBEiJ_G0025182.1 mouse_genomes_project 2 85476742 85499147 + Tnks1bp1 protein_coding processed_transcript MGP_WSBEiJ_T0054677.1 MGP_WSBEiJ_G0025182.1 mouse_genomes_project 2 85477027 85484673 + Tnks1bp1 protein_coding processed_transcript MGP_WSBEiJ_T0054678.1 MGP_WSBEiJ_G0025182.1 mouse_genomes_project 2 85484274 85499157 + MGP_WSBEiJ_P0054678 Tnks1bp1 protein_coding protein_coding MGP_WSBEiJ_T0056265.1 MGP_WSBEiJ_G0025669.1 mouse_genomes_project 2 124721706 124723251 + protein_coding retained_intron MGP_WSBEiJ_T0058042.1 MGP_WSBEiJ_G0026088.1 mouse_genomes_project 2 168315987 168317255 - MGP_WSBEiJ_P0058042 Wfdc15a protein_coding protein_coding MGP_WSBEiJ_T0058735.1 MGP_WSBEiJ_G0026258.1 mouse_genomes_project 2 186349040 186359579 - MGP_WSBEiJ_P0058735 Eef1a2 protein_coding protein_coding MGP_WSBEiJ_T0058403.1 MGP_WSBEiJ_G0026176.1 mouse_genomes_project 2 172948070 173065103 - MGP_WSBEiJ_P0058403 Nfatc2 protein_coding protein_coding MGP_WSBEiJ_T0058404.1 MGP_WSBEiJ_G0026176.1 mouse_genomes_project 2 172948070 173064998 - MGP_WSBEiJ_P0058404 Nfatc2 protein_coding protein_coding MGP_WSBEiJ_T0058405.1 MGP_WSBEiJ_G0026176.1 mouse_genomes_project 2 172948073 173025444 - Nfatc2 protein_coding processed_transcript MGP_WSBEiJ_T0058406.1 MGP_WSBEiJ_G0026176.1 mouse_genomes_project 2 172990168 173076195 - Nfatc2 protein_coding processed_transcript MGP_WSBEiJ_T0058407.1 MGP_WSBEiJ_G0026176.1 mouse_genomes_project 2 172991071 173076220 - MGP_WSBEiJ_P0058407 Nfatc2 protein_coding protein_coding MGP_WSBEiJ_T0058408.1 MGP_WSBEiJ_G0026176.1 mouse_genomes_project 2 172991357 173064929 - MGP_WSBEiJ_P0058408 Nfatc2 protein_coding protein_coding MGP_WSBEiJ_T0058409.1 MGP_WSBEiJ_G0026176.1 mouse_genomes_project 2 173006437 173065069 - Nfatc2 protein_coding retained_intron MGP_WSBEiJ_T0058410.1 MGP_WSBEiJ_G0026176.1 mouse_genomes_project 2 173039626 173065103 - Nfatc2 protein_coding retained_intron MGP_WSBEiJ_T0052614.1 MGP_WSBEiJ_G0024807.1 mouse_genomes_project 2 27775589 27779496 + Gm13547 protein_coding processed_transcript MGP_WSBEiJ_T0052616.1 MGP_WSBEiJ_G0024807.1 mouse_genomes_project 2 27777582 27780146 + MGP_WSBEiJ_P0052616 Gm13547 protein_coding protein_coding MGP_WSBEiJ_T0052617.1 MGP_WSBEiJ_G0024807.1 mouse_genomes_project 2 27777617 27780024 + MGP_WSBEiJ_P0052617 Gm13547 protein_coding protein_coding MGP_WSBEiJ_T0055569.1 MGP_WSBEiJ_G0025493.1 mouse_genomes_project 2 111480362 111490507 + MGP_WSBEiJ_P0055569 Lin7c protein_coding protein_coding MGP_WSBEiJ_T0055570.1 MGP_WSBEiJ_G0025493.1 mouse_genomes_project 2 111480379 111486242 + Lin7c protein_coding retained_intron MGP_WSBEiJ_T0013167.1 MGP_WSBEiJ_G0011297.1 mouse_genomes_project 2 39498144 39498497 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052710.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28137799 28167594 - MGP_WSBEiJ_P0052710 Zer1 protein_coding protein_coding MGP_WSBEiJ_T0052711.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28137799 28167447 - MGP_WSBEiJ_P0052711 Zer1 protein_coding protein_coding MGP_WSBEiJ_T0052712.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28141561 28143532 - Zer1 protein_coding retained_intron MGP_WSBEiJ_T0052713.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28142217 28144501 - Zer1 protein_coding retained_intron MGP_WSBEiJ_T0052714.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28147067 28167597 - Zer1 protein_coding retained_intron MGP_WSBEiJ_T0052715.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28147328 28167591 - Zer1 protein_coding retained_intron MGP_WSBEiJ_T0052716.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28148573 28152545 - Zer1 protein_coding retained_intron MGP_WSBEiJ_T0052717.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28148950 28149416 - Zer1 protein_coding processed_transcript MGP_WSBEiJ_T0052718.1 MGP_WSBEiJ_G0024819.1 mouse_genomes_project 2 28149288 28150316 - Zer1 protein_coding retained_intron MGP_WSBEiJ_T0013313.1 MGP_WSBEiJ_G0011443.1 mouse_genomes_project 2 95519981 95520582 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058440.1 MGP_WSBEiJ_G0026182.1 mouse_genomes_project 2 174713127 174735673 - MGP_WSBEiJ_P0058440 Zfp217 protein_coding protein_coding MGP_WSBEiJ_T0058441.1 MGP_WSBEiJ_G0026182.1 mouse_genomes_project 2 174713130 174747121 - MGP_WSBEiJ_P0058441 Zfp217 protein_coding protein_coding MGP_WSBEiJ_T0058442.1 MGP_WSBEiJ_G0026182.1 mouse_genomes_project 2 174724807 174735673 - Zfp217 protein_coding processed_transcript MGP_WSBEiJ_T0058443.1 MGP_WSBEiJ_G0026182.1 mouse_genomes_project 2 174725093 174738402 - Zfp217 protein_coding processed_transcript MGP_WSBEiJ_T0058444.1 MGP_WSBEiJ_G0026182.1 mouse_genomes_project 2 174725193 174752532 - Zfp217 protein_coding processed_transcript MGP_WSBEiJ_T0054061.1 MGP_WSBEiJ_G0025055.1 mouse_genomes_project 2 68153310 68186393 + MGP_WSBEiJ_P0054061 4933409G03Rik protein_coding protein_coding MGP_WSBEiJ_T0054062.1 MGP_WSBEiJ_G0025055.1 mouse_genomes_project 2 68162816 68184711 + MGP_WSBEiJ_P0054062 4933409G03Rik protein_coding protein_coding MGP_WSBEiJ_T0013142.1 MGP_WSBEiJ_G0011272.1 mouse_genomes_project 2 33927314 33927621 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056377.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129064335 129115781 - MGP_WSBEiJ_P0056377 Gabpb1 protein_coding protein_coding MGP_WSBEiJ_T0056378.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129065806 129115715 - MGP_WSBEiJ_P0056378 Gabpb1 protein_coding protein_coding MGP_WSBEiJ_T0056379.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129065808 129115757 - MGP_WSBEiJ_P0056379 Gabpb1 protein_coding protein_coding MGP_WSBEiJ_T0056380.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129077050 129116549 - MGP_WSBEiJ_P0056380 Gabpb1 protein_coding protein_coding MGP_WSBEiJ_T0056381.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129077435 129115699 - MGP_WSBEiJ_P0056381 Gabpb1 protein_coding protein_coding MGP_WSBEiJ_T0056382.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129086161 129115805 - MGP_WSBEiJ_P0056382 Gabpb1 protein_coding protein_coding MGP_WSBEiJ_T0056383.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129090747 129115552 - Gabpb1 protein_coding processed_transcript MGP_WSBEiJ_T0056384.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129092038 129115565 - MGP_WSBEiJ_P0056384 Gabpb1 protein_coding protein_coding MGP_WSBEiJ_T0056385.1 MGP_WSBEiJ_G0025696.1 mouse_genomes_project 2 129092115 129102626 - MGP_WSBEiJ_P0056385 Gabpb1 protein_coding protein_coding MGP_WSBEiJ_T0004066.1 MGP_WSBEiJ_G0003601.1 mouse_genomes_project 2 167497366 167497933 + 2900093K20Rik antisense antisense MGP_WSBEiJ_T0010189.1 MGP_WSBEiJ_G0008346.1 mouse_genomes_project 2 7820657 7820759 + Gm24342 miRNA miRNA MGP_WSBEiJ_T0007247.1 MGP_WSBEiJ_G0005944.1 mouse_genomes_project 2 154152369 154153007 - Gm28450 lincRNA lincRNA MGP_WSBEiJ_T0054767.1 MGP_WSBEiJ_G0025265.1 mouse_genomes_project 2 87914897 87965334 + MGP_WSBEiJ_P0054767 protein_coding protein_coding MGP_WSBEiJ_T0013244.1 MGP_WSBEiJ_G0011374.1 mouse_genomes_project 2 72444254 72445420 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053539.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37198837 37419152 - MGP_WSBEiJ_P0053539 Nr6a1 protein_coding protein_coding MGP_WSBEiJ_T0053540.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37198841 37417703 - MGP_WSBEiJ_P0053540 Nr6a1 protein_coding protein_coding MGP_WSBEiJ_T0053541.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37198841 37264250 - MGP_WSBEiJ_P0053541 Nr6a1 protein_coding protein_coding MGP_WSBEiJ_T0053542.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37214737 37217605 - Nr6a1 protein_coding processed_transcript MGP_WSBEiJ_T0053543.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37215867 37220098 - Nr6a1 protein_coding processed_transcript MGP_WSBEiJ_T0053544.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37216275 37264255 - MGP_WSBEiJ_P0053544 Nr6a1 protein_coding protein_coding MGP_WSBEiJ_T0053545.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37217564 37264846 - Nr6a1 protein_coding processed_transcript MGP_WSBEiJ_T0053546.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37217683 37417761 - MGP_WSBEiJ_P0053546 Nr6a1 protein_coding protein_coding MGP_WSBEiJ_T0053547.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37219581 37264204 - Nr6a1 protein_coding processed_transcript MGP_WSBEiJ_T0053548.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37220097 37241930 - Nr6a1 protein_coding retained_intron MGP_WSBEiJ_T0053549.1 MGP_WSBEiJ_G0024969.1 mouse_genomes_project 2 37261664 37264204 - Nr6a1 protein_coding processed_transcript MGP_WSBEiJ_T0053453.1 MGP_WSBEiJ_G0024938.1 mouse_genomes_project 2 35228745 35229684 + MGP_WSBEiJ_P0053453 Olfr50 protein_coding protein_coding MGP_WSBEiJ_T0003946.1 MGP_WSBEiJ_G0003513.1 mouse_genomes_project 2 80690417 80696053 + Gm13752 antisense antisense MGP_WSBEiJ_T0013071.1 MGP_WSBEiJ_G0011201.1 mouse_genomes_project 2 5318765 5319419 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057253.1 MGP_WSBEiJ_G0025912.1 mouse_genomes_project 2 155978105 155982532 - MGP_WSBEiJ_P0057253 Defb22 protein_coding protein_coding MGP_WSBEiJ_T0100730.1 MGP_WSBEiJ_G0039188.1 mouse_genomes_project 2 90889057 90889987 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007308.1 MGP_WSBEiJ_G0005996.1 mouse_genomes_project 2 174807587 174809194 - Gm17619 lincRNA lincRNA MGP_WSBEiJ_T0099359.1 MGP_WSBEiJ_G0038022.1 mouse_genomes_project 2 62119792 62119928 - Gm22020 snoRNA snoRNA MGP_WSBEiJ_T0054481.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79590800 79599597 - MGP_WSBEiJ_P0054481 Cerkl protein_coding protein_coding MGP_WSBEiJ_T0054482.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79592009 79695202 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054483.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79592759 79594730 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054484.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79592787 79695139 - MGP_WSBEiJ_P0054484 Cerkl protein_coding protein_coding MGP_WSBEiJ_T0054485.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79592850 79695155 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054486.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79592850 79695139 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054487.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79592852 79695245 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054488.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79599562 79723840 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054489.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79606270 79633930 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054490.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79617825 79633955 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054491.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79653518 79657141 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0054492.1 MGP_WSBEiJ_G0025140.1 mouse_genomes_project 2 79654849 79659037 - Cerkl protein_coding processed_transcript MGP_WSBEiJ_T0057309.1 MGP_WSBEiJ_G0025933.1 mouse_genomes_project 2 156531482 156539289 - MGP_WSBEiJ_P0057309 Pdrg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057310.1 MGP_WSBEiJ_G0025933.1 mouse_genomes_project 2 156531482 156539289 - MGP_WSBEiJ_P0057310 Pdrg1 protein_coding protein_coding MGP_WSBEiJ_T0057311.1 MGP_WSBEiJ_G0025933.1 mouse_genomes_project 2 156532062 156536352 - Pdrg1 protein_coding retained_intron MGP_WSBEiJ_T0057312.1 MGP_WSBEiJ_G0025933.1 mouse_genomes_project 2 156532885 156539228 - MGP_WSBEiJ_P0057312 Pdrg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057313.1 MGP_WSBEiJ_G0025933.1 mouse_genomes_project 2 156536074 156539208 - Pdrg1 protein_coding retained_intron MGP_WSBEiJ_T0057314.1 MGP_WSBEiJ_G0025933.1 mouse_genomes_project 2 156536244 156539224 - MGP_WSBEiJ_P0057314 Pdrg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057315.1 MGP_WSBEiJ_G0025933.1 mouse_genomes_project 2 156537212 156539239 - Pdrg1 protein_coding retained_intron MGP_WSBEiJ_T0057316.1 MGP_WSBEiJ_G0025933.1 mouse_genomes_project 2 156537876 156539204 - Pdrg1 protein_coding processed_transcript MGP_WSBEiJ_T0056443.1 MGP_WSBEiJ_G0025709.1 mouse_genomes_project 2 129753431 129769094 + Stard7 protein_coding processed_transcript MGP_WSBEiJ_T0056444.1 MGP_WSBEiJ_G0025709.1 mouse_genomes_project 2 129753795 129784203 + MGP_WSBEiJ_P0056444 Stard7 protein_coding protein_coding MGP_WSBEiJ_T0056445.1 MGP_WSBEiJ_G0025709.1 mouse_genomes_project 2 129753917 129784196 + MGP_WSBEiJ_P0056445 Stard7 protein_coding protein_coding MGP_WSBEiJ_T0056446.1 MGP_WSBEiJ_G0025709.1 mouse_genomes_project 2 129768743 129781081 + Stard7 protein_coding retained_intron MGP_WSBEiJ_T0056447.1 MGP_WSBEiJ_G0025709.1 mouse_genomes_project 2 129775521 129782576 + Stard7 protein_coding retained_intron MGP_WSBEiJ_T0056448.1 MGP_WSBEiJ_G0025709.1 mouse_genomes_project 2 129777346 129782601 + Stard7 protein_coding processed_transcript MGP_WSBEiJ_T0056449.1 MGP_WSBEiJ_G0025709.1 mouse_genomes_project 2 129777348 129782630 + Stard7 protein_coding processed_transcript MGP_WSBEiJ_T0007040.1 MGP_WSBEiJ_G0005780.1 mouse_genomes_project 2 16397463 16400037 - Carlr lincRNA lincRNA MGP_WSBEiJ_T0051799.1 MGP_WSBEiJ_G0024655.1 mouse_genomes_project 2 18874798 18884145 + MGP_WSBEiJ_P0051799 Thnsl1 protein_coding protein_coding MGP_WSBEiJ_T0051800.1 MGP_WSBEiJ_G0024655.1 mouse_genomes_project 2 18874813 18883524 + MGP_WSBEiJ_P0051800 Thnsl1 protein_coding protein_coding MGP_WSBEiJ_T0051801.1 MGP_WSBEiJ_G0024655.1 mouse_genomes_project 2 18874833 18882391 + MGP_WSBEiJ_P0051801 Thnsl1 protein_coding protein_coding MGP_WSBEiJ_T0051802.1 MGP_WSBEiJ_G0024655.1 mouse_genomes_project 2 18874847 18880654 + MGP_WSBEiJ_P0051802 Thnsl1 protein_coding protein_coding MGP_WSBEiJ_T0051803.1 MGP_WSBEiJ_G0024655.1 mouse_genomes_project 2 18874861 18883455 + MGP_WSBEiJ_P0051803 Thnsl1 protein_coding protein_coding MGP_WSBEiJ_T0057608.1 MGP_WSBEiJ_G0026002.1 mouse_genomes_project 2 159739056 159772492 - MGP_WSBEiJ_P0057608 Fer1l4 protein_coding protein_coding MGP_WSBEiJ_T0057609.1 MGP_WSBEiJ_G0026002.1 mouse_genomes_project 2 159739057 159744794 - Fer1l4 protein_coding retained_intron MGP_WSBEiJ_T0057610.1 MGP_WSBEiJ_G0026002.1 mouse_genomes_project 2 159739058 159756296 - Fer1l4 protein_coding retained_intron MGP_WSBEiJ_T0057611.1 MGP_WSBEiJ_G0026002.1 mouse_genomes_project 2 159749215 159751274 - MGP_WSBEiJ_P0057611 Fer1l4 protein_coding protein_coding MGP_WSBEiJ_T0057612.1 MGP_WSBEiJ_G0026002.1 mouse_genomes_project 2 159749364 159751276 - Fer1l4 protein_coding retained_intron MGP_WSBEiJ_T0057613.1 MGP_WSBEiJ_G0026002.1 mouse_genomes_project 2 159754670 159757031 - MGP_WSBEiJ_P0057613 Fer1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053588.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 39066970 39087561 - protein_coding processed_transcript MGP_WSBEiJ_T0053589.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 39066972 41215360 - MGP_WSBEiJ_P0053589 protein_coding protein_coding MGP_WSBEiJ_T0053590.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 39067258 39100795 - MGP_WSBEiJ_P0053590 protein_coding protein_coding MGP_WSBEiJ_T0053591.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 39067258 39184060 - MGP_WSBEiJ_P0053591 protein_coding protein_coding MGP_WSBEiJ_T0053592.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 39072142 39132060 - MGP_WSBEiJ_P0053592 protein_coding protein_coding MGP_WSBEiJ_T0053593.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 39156224 39181036 - protein_coding retained_intron MGP_WSBEiJ_T0053594.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 39294561 40327663 - MGP_WSBEiJ_P0053594 protein_coding protein_coding MGP_WSBEiJ_T0053595.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 39787828 41214792 - MGP_WSBEiJ_P0053595 protein_coding protein_coding MGP_WSBEiJ_T0053596.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 40025628 41214808 - protein_coding retained_intron MGP_WSBEiJ_T0053597.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 40612835 41214661 - MGP_WSBEiJ_P0053597 protein_coding protein_coding MGP_WSBEiJ_T0053598.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 40875550 41214991 - protein_coding retained_intron MGP_WSBEiJ_T0053599.1 MGP_WSBEiJ_G0024978.1 mouse_genomes_project 2 41211603 41214750 - MGP_WSBEiJ_P0053599 protein_coding protein_coding MGP_WSBEiJ_T0058627.1 MGP_WSBEiJ_G0026237.1 mouse_genomes_project 2 185387095 185388167 + MGP_WSBEiJ_P0058627 Rps21 protein_coding protein_coding MGP_WSBEiJ_T0058628.1 MGP_WSBEiJ_G0026237.1 mouse_genomes_project 2 185387097 185388164 + Rps21 protein_coding retained_intron MGP_WSBEiJ_T0058629.1 MGP_WSBEiJ_G0026237.1 mouse_genomes_project 2 185387136 185387716 + Rps21 protein_coding retained_intron MGP_WSBEiJ_T0058630.1 MGP_WSBEiJ_G0026237.1 mouse_genomes_project 2 185387136 185387865 + Rps21 protein_coding retained_intron MGP_WSBEiJ_T0058272.1 MGP_WSBEiJ_G0026148.1 mouse_genomes_project 2 170354516 170445449 - Sulf2 protein_coding processed_transcript MGP_WSBEiJ_T0058273.1 MGP_WSBEiJ_G0026148.1 mouse_genomes_project 2 170355036 170356385 - Sulf2 protein_coding retained_intron MGP_WSBEiJ_T0058274.1 MGP_WSBEiJ_G0026148.1 mouse_genomes_project 2 170355154 170444680 - MGP_WSBEiJ_P0058274 Sulf2 protein_coding protein_coding MGP_WSBEiJ_T0058275.1 MGP_WSBEiJ_G0026148.1 mouse_genomes_project 2 170355181 170358484 - Sulf2 protein_coding processed_transcript MGP_WSBEiJ_T0058276.1 MGP_WSBEiJ_G0026148.1 mouse_genomes_project 2 170378218 170444650 - Sulf2 protein_coding processed_transcript MGP_WSBEiJ_T0058277.1 MGP_WSBEiJ_G0026148.1 mouse_genomes_project 2 170421191 170444267 - Sulf2 protein_coding processed_transcript MGP_WSBEiJ_T0051856.1 MGP_WSBEiJ_G0024666.1 mouse_genomes_project 2 20986190 21071776 + MGP_WSBEiJ_P0051856 Nxph2 protein_coding protein_coding MGP_WSBEiJ_T0053940.1 MGP_WSBEiJ_G0025033.1 mouse_genomes_project 2 61617539 61700448 - MGP_WSBEiJ_P0053940 Dpp4 protein_coding protein_coding MGP_WSBEiJ_T0053941.1 MGP_WSBEiJ_G0025033.1 mouse_genomes_project 2 61620084 61700008 - MGP_WSBEiJ_P0053941 Dpp4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0053942.1 MGP_WSBEiJ_G0025033.1 mouse_genomes_project 2 61621939 61632811 - Dpp4 protein_coding retained_intron MGP_WSBEiJ_T0053943.1 MGP_WSBEiJ_G0025033.1 mouse_genomes_project 2 61640003 61645455 - Dpp4 protein_coding processed_transcript MGP_WSBEiJ_T0053944.1 MGP_WSBEiJ_G0025033.1 mouse_genomes_project 2 61653108 61666643 - Dpp4 protein_coding retained_intron MGP_WSBEiJ_T0053945.1 MGP_WSBEiJ_G0025033.1 mouse_genomes_project 2 61662648 61700238 - Dpp4 protein_coding retained_intron MGP_WSBEiJ_T0053946.1 MGP_WSBEiJ_G0025033.1 mouse_genomes_project 2 61695918 61700076 - Dpp4 protein_coding processed_transcript MGP_WSBEiJ_T0001013.1 MGP_WSBEiJ_G0000948.1 mouse_genomes_project 2 11445789 11449753 - TEC TEC MGP_WSBEiJ_T0013496.1 MGP_WSBEiJ_G0011626.1 mouse_genomes_project 2 171444212 171444410 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007019.1 MGP_WSBEiJ_G0005763.1 mouse_genomes_project 2 2188313 2293424 - Gm26776 lincRNA lincRNA MGP_WSBEiJ_T0056459.1 MGP_WSBEiJ_G0025714.1 mouse_genomes_project 2 129925074 129933410 - MGP_WSBEiJ_P0056459 Fahd2a protein_coding protein_coding MGP_WSBEiJ_T0056460.1 MGP_WSBEiJ_G0025714.1 mouse_genomes_project 2 129925075 129933425 - Fahd2a protein_coding retained_intron MGP_WSBEiJ_T0056461.1 MGP_WSBEiJ_G0025714.1 mouse_genomes_project 2 129925130 129927179 - Fahd2a protein_coding processed_transcript MGP_WSBEiJ_T0056462.1 MGP_WSBEiJ_G0025714.1 mouse_genomes_project 2 129925696 129933417 - Fahd2a protein_coding processed_transcript MGP_WSBEiJ_T0056463.1 MGP_WSBEiJ_G0025714.1 mouse_genomes_project 2 129926981 129933340 - Fahd2a protein_coding processed_transcript MGP_WSBEiJ_T0056464.1 MGP_WSBEiJ_G0025714.1 mouse_genomes_project 2 129927270 129933376 - Fahd2a protein_coding retained_intron MGP_WSBEiJ_T0056465.1 MGP_WSBEiJ_G0025714.1 mouse_genomes_project 2 129929290 129933368 - Fahd2a protein_coding processed_transcript MGP_WSBEiJ_T0057466.1 MGP_WSBEiJ_G0025977.1 mouse_genomes_project 2 158744885 158760820 - MGP_WSBEiJ_P0057466 Gm4737 protein_coding protein_coding MGP_WSBEiJ_T0057467.1 MGP_WSBEiJ_G0025977.1 mouse_genomes_project 2 158752120 158760770 - MGP_WSBEiJ_P0057467 Gm4737 protein_coding protein_coding MGP_WSBEiJ_T0057468.1 MGP_WSBEiJ_G0025977.1 mouse_genomes_project 2 158754914 158760770 - Gm4737 protein_coding retained_intron MGP_WSBEiJ_T0100691.1 MGP_WSBEiJ_G0039149.1 mouse_genomes_project 2 35264328 35264910 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0054355.1 MGP_WSBEiJ_G0025113.1 mouse_genomes_project 2 74583714 74586196 + MGP_WSBEiJ_P0054355 Hoxd9 protein_coding protein_coding MGP_WSBEiJ_T0010326.1 MGP_WSBEiJ_G0008483.1 mouse_genomes_project 2 186807925 186807994 - Mir7006 miRNA miRNA MGP_WSBEiJ_T0058093.1 MGP_WSBEiJ_G0026107.1 mouse_genomes_project 2 168729070 168734138 - MGP_WSBEiJ_P0058093 Wfdc6b protein_coding protein_coding MGP_WSBEiJ_T0054683.1 MGP_WSBEiJ_G0025185.1 mouse_genomes_project 2 85863260 85864190 - MGP_WSBEiJ_P0054683 Olfr992 protein_coding protein_coding MGP_WSBEiJ_T0055779.1 MGP_WSBEiJ_G0025573.1 mouse_genomes_project 2 120755789 120761869 + MGP_WSBEiJ_P0055779 Phgr1 protein_coding protein_coding MGP_WSBEiJ_T0055780.1 MGP_WSBEiJ_G0025573.1 mouse_genomes_project 2 120755789 120761870 + MGP_WSBEiJ_P0055780 Phgr1 protein_coding protein_coding MGP_WSBEiJ_T0054692.1 MGP_WSBEiJ_G0025194.1 mouse_genomes_project 2 86157870 86162758 - MGP_WSBEiJ_P0054692 protein_coding protein_coding MGP_WSBEiJ_T0054693.1 MGP_WSBEiJ_G0025194.1 mouse_genomes_project 2 86157870 86159176 - MGP_WSBEiJ_P0054693 protein_coding protein_coding MGP_WSBEiJ_T0017241.1 MGP_WSBEiJ_G0014876.1 mouse_genomes_project 2 115756172 115813130 + A530058N18Rik processed_transcript antisense MGP_WSBEiJ_T0017242.1 MGP_WSBEiJ_G0014876.1 mouse_genomes_project 2 115756176 115807193 + A530058N18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0013059.1 MGP_WSBEiJ_G0011189.1 mouse_genomes_project 2 507289 507605 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055694.1 MGP_WSBEiJ_G0025555.1 mouse_genomes_project 2 116271750 116417456 - MGP_WSBEiJ_P0055694 Dph6 protein_coding protein_coding MGP_WSBEiJ_T0055695.1 MGP_WSBEiJ_G0025555.1 mouse_genomes_project 2 116271976 116417490 - MGP_WSBEiJ_P0055695 Dph6 protein_coding protein_coding MGP_WSBEiJ_T0055696.1 MGP_WSBEiJ_G0025555.1 mouse_genomes_project 2 116273428 116302424 - Dph6 protein_coding processed_transcript MGP_WSBEiJ_T0055697.1 MGP_WSBEiJ_G0025555.1 mouse_genomes_project 2 116276511 116417567 - Dph6 protein_coding retained_intron MGP_WSBEiJ_T0055698.1 MGP_WSBEiJ_G0025555.1 mouse_genomes_project 2 116403876 116417508 - Dph6 protein_coding retained_intron MGP_WSBEiJ_T0057335.1 MGP_WSBEiJ_G0025939.1 mouse_genomes_project 2 156755418 156769092 - MGP_WSBEiJ_P0057335 Plagl2 protein_coding protein_coding MGP_WSBEiJ_T0057336.1 MGP_WSBEiJ_G0025939.1 mouse_genomes_project 2 156755431 156765581 - MGP_WSBEiJ_P0057336 Plagl2 protein_coding protein_coding MGP_WSBEiJ_T0100062.1 MGP_WSBEiJ_G0038680.1 mouse_genomes_project 2 133451512 133452001 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013488.1 MGP_WSBEiJ_G0011618.1 mouse_genomes_project 2 168640019 168640744 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055545.1 MGP_WSBEiJ_G0025489.1 mouse_genomes_project 2 108764593 108772461 + MGP_WSBEiJ_P0055545 Kcna4 protein_coding protein_coding MGP_WSBEiJ_T0055546.1 MGP_WSBEiJ_G0025489.1 mouse_genomes_project 2 108765349 108768431 + Kcna4 protein_coding processed_transcript MGP_WSBEiJ_T0052769.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28405831 28420221 - MGP_WSBEiJ_P0052769 Sh3glb2 protein_coding protein_coding MGP_WSBEiJ_T0052770.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28405831 28420297 - MGP_WSBEiJ_P0052770 Sh3glb2 protein_coding protein_coding MGP_WSBEiJ_T0052771.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28405833 28420270 - MGP_WSBEiJ_P0052771 Sh3glb2 protein_coding protein_coding MGP_WSBEiJ_T0052772.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28405833 28420246 - MGP_WSBEiJ_P0052772 Sh3glb2 protein_coding protein_coding MGP_WSBEiJ_T0052773.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28405833 28420313 - MGP_WSBEiJ_P0052773 Sh3glb2 protein_coding protein_coding MGP_WSBEiJ_T0052774.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28406154 28420286 - Sh3glb2 protein_coding retained_intron MGP_WSBEiJ_T0052775.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28406160 28407121 - Sh3glb2 protein_coding processed_transcript MGP_WSBEiJ_T0052776.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28406839 28420318 - Sh3glb2 protein_coding processed_transcript MGP_WSBEiJ_T0052777.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28406905 28408676 - Sh3glb2 protein_coding retained_intron MGP_WSBEiJ_T0052778.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28407127 28408607 - Sh3glb2 protein_coding retained_intron MGP_WSBEiJ_T0052779.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28409087 28416346 - Sh3glb2 protein_coding retained_intron MGP_WSBEiJ_T0052780.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28409109 28415861 - Sh3glb2 protein_coding retained_intron MGP_WSBEiJ_T0052781.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28410502 28420226 - Sh3glb2 protein_coding processed_transcript MGP_WSBEiJ_T0052782.1 MGP_WSBEiJ_G0024830.1 mouse_genomes_project 2 28410759 28420241 - Sh3glb2 protein_coding retained_intron MGP_WSBEiJ_T0057578.1 MGP_WSBEiJ_G0025998.1 mouse_genomes_project 2 159656841 159661165 - MGP_WSBEiJ_P0057578 Gdf5 protein_coding protein_coding MGP_WSBEiJ_T0099371.1 MGP_WSBEiJ_G0038034.1 mouse_genomes_project 2 98220706 98220835 - Gm23317 snoRNA snoRNA MGP_WSBEiJ_T0010275.1 MGP_WSBEiJ_G0008432.1 mouse_genomes_project 2 105146621 105146717 + Gm22757 miRNA miRNA MGP_WSBEiJ_T0057318.1 MGP_WSBEiJ_G0025935.1 mouse_genomes_project 2 156590736 156608281 + Ccm2l protein_coding processed_transcript MGP_WSBEiJ_T0057319.1 MGP_WSBEiJ_G0025935.1 mouse_genomes_project 2 156590765 156595923 + Ccm2l protein_coding processed_transcript MGP_WSBEiJ_T0057320.1 MGP_WSBEiJ_G0025935.1 mouse_genomes_project 2 156590779 156595730 + MGP_WSBEiJ_P0057320 Ccm2l protein_coding protein_coding MGP_WSBEiJ_T0057321.1 MGP_WSBEiJ_G0025935.1 mouse_genomes_project 2 156590788 156608281 + MGP_WSBEiJ_P0057321 Ccm2l protein_coding protein_coding MGP_WSBEiJ_T0099332.1 MGP_WSBEiJ_G0037995.1 mouse_genomes_project 2 20538135 20538255 + Gm25544 snoRNA snoRNA MGP_WSBEiJ_T0055761.1 MGP_WSBEiJ_G0025568.1 mouse_genomes_project 2 120568933 120618214 + MGP_WSBEiJ_P0055761 Bub1b protein_coding protein_coding MGP_WSBEiJ_T0055762.1 MGP_WSBEiJ_G0025568.1 mouse_genomes_project 2 120572097 120581750 + Bub1b protein_coding retained_intron MGP_WSBEiJ_T0055763.1 MGP_WSBEiJ_G0025568.1 mouse_genomes_project 2 120602255 120603494 + Bub1b protein_coding retained_intron MGP_WSBEiJ_T0055764.1 MGP_WSBEiJ_G0025568.1 mouse_genomes_project 2 120603201 120613371 + Bub1b protein_coding retained_intron MGP_WSBEiJ_T0058136.1 MGP_WSBEiJ_G0026127.1 mouse_genomes_project 2 169011531 169014256 - MGP_WSBEiJ_P0058136 Neurl2 protein_coding protein_coding MGP_WSBEiJ_T0007195.1 MGP_WSBEiJ_G0005903.1 mouse_genomes_project 2 117915373 117934176 + G630016G05Rik lincRNA lincRNA MGP_WSBEiJ_T0007196.1 MGP_WSBEiJ_G0005903.1 mouse_genomes_project 2 117916118 117934175 + G630016G05Rik lincRNA lincRNA MGP_WSBEiJ_T0013445.1 MGP_WSBEiJ_G0011575.1 mouse_genomes_project 2 153457354 153458349 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004019.1 MGP_WSBEiJ_G0003561.1 mouse_genomes_project 2 138008278 138056835 - 4930545L23Rik antisense antisense MGP_WSBEiJ_T0053389.1 MGP_WSBEiJ_G0024919.1 mouse_genomes_project 2 33784795 33806654 - MGP_WSBEiJ_P0053389 4930402F06Rik protein_coding protein_coding MGP_WSBEiJ_T0053390.1 MGP_WSBEiJ_G0024919.1 mouse_genomes_project 2 33784815 33806536 - MGP_WSBEiJ_P0053390 4930402F06Rik protein_coding protein_coding MGP_WSBEiJ_T0051749.1 MGP_WSBEiJ_G0024648.1 mouse_genomes_project 2 16985706 16998044 + Msrb2 protein_coding processed_transcript MGP_WSBEiJ_T0051750.1 MGP_WSBEiJ_G0024648.1 mouse_genomes_project 2 16985902 17011329 + MGP_WSBEiJ_P0051750 Msrb2 protein_coding protein_coding MGP_WSBEiJ_T0051751.1 MGP_WSBEiJ_G0024648.1 mouse_genomes_project 2 16985934 17009673 + Msrb2 protein_coding processed_transcript MGP_WSBEiJ_T0051752.1 MGP_WSBEiJ_G0024648.1 mouse_genomes_project 2 16986107 17010617 + Msrb2 protein_coding processed_transcript MGP_WSBEiJ_T0053558.1 MGP_WSBEiJ_G0024973.1 mouse_genomes_project 2 37507301 37518793 + Arpc5l protein_coding processed_transcript MGP_WSBEiJ_T0053559.1 MGP_WSBEiJ_G0024973.1 mouse_genomes_project 2 37509993 37519344 + MGP_WSBEiJ_P0053559 Arpc5l protein_coding protein_coding MGP_WSBEiJ_T0053560.1 MGP_WSBEiJ_G0024973.1 mouse_genomes_project 2 37510058 37517366 + Arpc5l protein_coding processed_transcript MGP_WSBEiJ_T0053561.1 MGP_WSBEiJ_G0024973.1 mouse_genomes_project 2 37510074 37518860 + MGP_WSBEiJ_P0053561 Arpc5l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053562.1 MGP_WSBEiJ_G0024973.1 mouse_genomes_project 2 37511935 37519344 + Arpc5l protein_coding processed_transcript MGP_WSBEiJ_T0051277.1 MGP_WSBEiJ_G0024570.1 mouse_genomes_project 2 295249 298942 - MGP_WSBEiJ_P0051277 Rpp38 protein_coding protein_coding MGP_WSBEiJ_T0055630.1 MGP_WSBEiJ_G0025535.1 mouse_genomes_project 2 113949098 113956691 + MGP_WSBEiJ_P0055630 Lpcat4 protein_coding protein_coding MGP_WSBEiJ_T0055631.1 MGP_WSBEiJ_G0025535.1 mouse_genomes_project 2 113951115 113953637 + Lpcat4 protein_coding processed_transcript MGP_WSBEiJ_T0055632.1 MGP_WSBEiJ_G0025535.1 mouse_genomes_project 2 113951584 113952374 + Lpcat4 protein_coding processed_transcript MGP_WSBEiJ_T0055633.1 MGP_WSBEiJ_G0025535.1 mouse_genomes_project 2 113954161 113956553 + Lpcat4 protein_coding processed_transcript MGP_WSBEiJ_T0051289.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 392643 429665 + MGP_WSBEiJ_P0051289 Dclre1c protein_coding protein_coding MGP_WSBEiJ_T0051290.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 392643 432684 + MGP_WSBEiJ_P0051290 Dclre1c protein_coding protein_coding MGP_WSBEiJ_T0051291.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 392662 406835 + Dclre1c protein_coding processed_transcript MGP_WSBEiJ_T0051292.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 392662 422646 + MGP_WSBEiJ_P0051292 Dclre1c protein_coding protein_coding MGP_WSBEiJ_T0051293.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 392677 406873 + Dclre1c protein_coding processed_transcript MGP_WSBEiJ_T0051294.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 392677 429657 + MGP_WSBEiJ_P0051294 Dclre1c protein_coding protein_coding MGP_WSBEiJ_T0051295.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 392714 410757 + Dclre1c protein_coding retained_intron MGP_WSBEiJ_T0051296.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 409379 427475 + MGP_WSBEiJ_P0051296 Dclre1c protein_coding protein_coding MGP_WSBEiJ_T0051297.1 MGP_WSBEiJ_G0024574.1 mouse_genomes_project 2 421502 422421 + Dclre1c protein_coding processed_transcript MGP_WSBEiJ_T0054409.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76696455 76978672 - MGP_WSBEiJ_P0054409 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054410.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76697507 76976399 - MGP_WSBEiJ_P0054410 Ttn protein_coding unknown_likely_coding MGP_WSBEiJ_T0054411.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76809141 76934798 - MGP_WSBEiJ_P0054411 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054412.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76809811 76891897 - MGP_WSBEiJ_P0054412 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054413.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76809845 76868590 - MGP_WSBEiJ_P0054413 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054414.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76809846 76868590 - MGP_WSBEiJ_P0054414 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054415.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76809846 76868590 - MGP_WSBEiJ_P0054415 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054416.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76809846 76868590 - MGP_WSBEiJ_P0054416 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054417.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76809864 76868590 - MGP_WSBEiJ_P0054417 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054418.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76815618 76821028 - MGP_WSBEiJ_P0054418 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054419.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76817016 76838449 - MGP_WSBEiJ_P0054419 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054420.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76825753 76826677 - MGP_WSBEiJ_P0054420 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054421.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76828279 76829238 - MGP_WSBEiJ_P0054421 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054422.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76833252 76834102 - MGP_WSBEiJ_P0054422 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054423.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76833252 76836193 - MGP_WSBEiJ_P0054423 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054424.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76842125 76845062 - MGP_WSBEiJ_P0054424 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054425.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76847164 76872548 - MGP_WSBEiJ_P0054425 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054426.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76890722 76891479 - Ttn protein_coding processed_transcript MGP_WSBEiJ_T0054427.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76915756 76978672 - MGP_WSBEiJ_P0054427 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054428.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76938415 76941016 - Ttn protein_coding retained_intron MGP_WSBEiJ_T0054429.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76960570 76978764 - Ttn protein_coding retained_intron MGP_WSBEiJ_T0054430.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76961376 76978764 - MGP_WSBEiJ_P0054430 Ttn protein_coding protein_coding MGP_WSBEiJ_T0054431.1 MGP_WSBEiJ_G0025133.1 mouse_genomes_project 2 76969383 76978764 - Ttn protein_coding retained_intron MGP_WSBEiJ_T0053901.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 59946007 60179681 - MGP_WSBEiJ_P0053901 Rbms1 protein_coding protein_coding MGP_WSBEiJ_T0053902.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 59950035 60085173 - MGP_WSBEiJ_P0053902 Rbms1 protein_coding protein_coding MGP_WSBEiJ_T0053903.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 59950805 60085205 - MGP_WSBEiJ_P0053903 Rbms1 protein_coding protein_coding MGP_WSBEiJ_T0053904.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 59951639 59961397 - Rbms1 protein_coding processed_transcript MGP_WSBEiJ_T0053905.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 59953494 59980028 - Rbms1 protein_coding processed_transcript MGP_WSBEiJ_T0053906.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 60045690 60091788 - Rbms1 protein_coding processed_transcript MGP_WSBEiJ_T0053907.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 60045690 60092763 - Rbms1 protein_coding processed_transcript MGP_WSBEiJ_T0053908.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 60091944 60092241 - Rbms1 protein_coding processed_transcript MGP_WSBEiJ_T0053909.1 MGP_WSBEiJ_G0025028.1 mouse_genomes_project 2 60092156 60092729 - Rbms1 protein_coding processed_transcript MGP_WSBEiJ_T0058316.1 MGP_WSBEiJ_G0026155.1 mouse_genomes_project 2 171360138 171380830 + MGP_WSBEiJ_P0058316 Ddx27 protein_coding protein_coding MGP_WSBEiJ_T0058317.1 MGP_WSBEiJ_G0026155.1 mouse_genomes_project 2 171360255 171371746 + MGP_WSBEiJ_P0058317 Ddx27 protein_coding protein_coding MGP_WSBEiJ_T0058318.1 MGP_WSBEiJ_G0026155.1 mouse_genomes_project 2 171360255 171370464 + MGP_WSBEiJ_P0058318 Ddx27 protein_coding protein_coding MGP_WSBEiJ_T0058319.1 MGP_WSBEiJ_G0026155.1 mouse_genomes_project 2 171372133 171373795 + Ddx27 protein_coding retained_intron MGP_WSBEiJ_T0058320.1 MGP_WSBEiJ_G0026155.1 mouse_genomes_project 2 171373474 171374223 + Ddx27 protein_coding retained_intron MGP_WSBEiJ_T0058321.1 MGP_WSBEiJ_G0026155.1 mouse_genomes_project 2 171379729 171380786 + Ddx27 protein_coding retained_intron MGP_WSBEiJ_T0096810.1 MGP_WSBEiJ_G0035491.1 mouse_genomes_project 2 20531089 20531505 - pseudogene pseudogene MGP_WSBEiJ_T0058623.1 MGP_WSBEiJ_G0026236.1 mouse_genomes_project 2 185301143 185304414 - Lama5 protein_coding processed_transcript MGP_WSBEiJ_T0058624.1 MGP_WSBEiJ_G0026236.1 mouse_genomes_project 2 185301143 185352790 - MGP_WSBEiJ_P0058624 Lama5 protein_coding protein_coding MGP_WSBEiJ_T0058625.1 MGP_WSBEiJ_G0026236.1 mouse_genomes_project 2 185301224 185302358 - Lama5 protein_coding processed_transcript MGP_WSBEiJ_T0058626.1 MGP_WSBEiJ_G0026236.1 mouse_genomes_project 2 185301938 185303174 - Lama5 protein_coding processed_transcript MGP_WSBEiJ_T0007023.1 MGP_WSBEiJ_G0005766.1 mouse_genomes_project 2 3615461 3623187 + Gm13391 lincRNA lincRNA MGP_WSBEiJ_T0007024.1 MGP_WSBEiJ_G0005766.1 mouse_genomes_project 2 3615731 3616571 + Gm13391 lincRNA lincRNA MGP_WSBEiJ_T0017164.1 MGP_WSBEiJ_G0014828.1 mouse_genomes_project 2 27242138 27250021 - 6530402F18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017165.1 MGP_WSBEiJ_G0014828.1 mouse_genomes_project 2 27247938 27250034 - 6530402F18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0058853.1 MGP_WSBEiJ_G0026277.1 mouse_genomes_project 2 186811893 186838691 + MGP_WSBEiJ_P0058853 Prpf6 protein_coding protein_coding MGP_WSBEiJ_T0058857.1 MGP_WSBEiJ_G0026277.1 mouse_genomes_project 2 186822508 186885896 + MGP_WSBEiJ_P0058857 Prpf6 protein_coding protein_coding MGP_WSBEiJ_T0058858.1 MGP_WSBEiJ_G0026277.1 mouse_genomes_project 2 186822511 186885905 + MGP_WSBEiJ_P0058858 Prpf6 protein_coding protein_coding MGP_WSBEiJ_T0058859.1 MGP_WSBEiJ_G0026277.1 mouse_genomes_project 2 186822565 186868969 + Prpf6 protein_coding retained_intron MGP_WSBEiJ_T0013372.1 MGP_WSBEiJ_G0011502.1 mouse_genomes_project 2 121535783 121537364 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056271.1 MGP_WSBEiJ_G0025671.1 mouse_genomes_project 2 124910001 124913753 + MGP_WSBEiJ_P0056271 AA467197 protein_coding protein_coding MGP_WSBEiJ_T0056272.1 MGP_WSBEiJ_G0025671.1 mouse_genomes_project 2 124910866 124914216 + MGP_WSBEiJ_P0056272 AA467197 protein_coding protein_coding MGP_WSBEiJ_T0056273.1 MGP_WSBEiJ_G0025671.1 mouse_genomes_project 2 124910931 124913967 + AA467197 protein_coding processed_transcript MGP_WSBEiJ_T0056274.1 MGP_WSBEiJ_G0025671.1 mouse_genomes_project 2 124910931 124914109 + MGP_WSBEiJ_P0056274 AA467197 protein_coding protein_coding MGP_WSBEiJ_T0054930.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91424505 91469379 + MGP_WSBEiJ_P0054930 Fnbp4 protein_coding protein_coding MGP_WSBEiJ_T0054931.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91424733 91453317 + MGP_WSBEiJ_P0054931 Fnbp4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0054932.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91424739 91463731 + Fnbp4 protein_coding processed_transcript MGP_WSBEiJ_T0054933.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91432062 91438983 + Fnbp4 protein_coding processed_transcript MGP_WSBEiJ_T0054934.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91439132 91446383 + Fnbp4 protein_coding processed_transcript MGP_WSBEiJ_T0054935.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91439935 91453579 + Fnbp4 protein_coding processed_transcript MGP_WSBEiJ_T0054936.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91446070 91453800 + Fnbp4 protein_coding processed_transcript MGP_WSBEiJ_T0054937.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91453828 91463625 + Fnbp4 protein_coding processed_transcript MGP_WSBEiJ_T0054938.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91454385 91463714 + Fnbp4 protein_coding processed_transcript MGP_WSBEiJ_T0054939.1 MGP_WSBEiJ_G0025384.1 mouse_genomes_project 2 91462798 91463622 + Fnbp4 protein_coding processed_transcript MGP_WSBEiJ_T0013209.1 MGP_WSBEiJ_G0011339.1 mouse_genomes_project 2 58253170 58253682 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052012.1 MGP_WSBEiJ_G0024693.1 mouse_genomes_project 2 22967956 22973483 - MGP_WSBEiJ_P0052012 Slc34a3 protein_coding protein_coding MGP_WSBEiJ_T0052013.1 MGP_WSBEiJ_G0024693.1 mouse_genomes_project 2 22969840 22972126 - Slc34a3 protein_coding processed_transcript MGP_WSBEiJ_T0052014.1 MGP_WSBEiJ_G0024693.1 mouse_genomes_project 2 22971022 22973337 - Slc34a3 protein_coding processed_transcript MGP_WSBEiJ_T0052015.1 MGP_WSBEiJ_G0024693.1 mouse_genomes_project 2 22971063 22973330 - Slc34a3 protein_coding processed_transcript MGP_WSBEiJ_T0052016.1 MGP_WSBEiJ_G0024693.1 mouse_genomes_project 2 22971068 22972788 - Slc34a3 protein_coding processed_transcript MGP_WSBEiJ_T0052017.1 MGP_WSBEiJ_G0024693.1 mouse_genomes_project 2 22971339 22973353 - Slc34a3 protein_coding processed_transcript MGP_WSBEiJ_T0052018.1 MGP_WSBEiJ_G0024693.1 mouse_genomes_project 2 22971506 22973307 - Slc34a3 protein_coding processed_transcript MGP_WSBEiJ_T0052005.1 MGP_WSBEiJ_G0024690.1 mouse_genomes_project 2 22950331 22951776 - Stpg3 protein_coding processed_transcript MGP_WSBEiJ_T0052006.1 MGP_WSBEiJ_G0024690.1 mouse_genomes_project 2 22950332 22952756 - Stpg3 protein_coding processed_transcript MGP_WSBEiJ_T0052007.1 MGP_WSBEiJ_G0024690.1 mouse_genomes_project 2 22950683 22952755 - MGP_WSBEiJ_P0052007 Stpg3 protein_coding protein_coding MGP_WSBEiJ_T0052008.1 MGP_WSBEiJ_G0024690.1 mouse_genomes_project 2 22950886 22952762 - MGP_WSBEiJ_P0052008 Stpg3 protein_coding protein_coding MGP_WSBEiJ_T0052009.1 MGP_WSBEiJ_G0024690.1 mouse_genomes_project 2 22951042 22952716 - Stpg3 protein_coding processed_transcript MGP_WSBEiJ_T0013476.1 MGP_WSBEiJ_G0011606.1 mouse_genomes_project 2 160951802 160952162 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053460.1 MGP_WSBEiJ_G0024945.1 mouse_genomes_project 2 35370848 35371781 - MGP_WSBEiJ_P0053460 Olfr355 protein_coding protein_coding MGP_WSBEiJ_T0054887.1 MGP_WSBEiJ_G0025362.1 mouse_genomes_project 2 90550761 90551706 - MGP_WSBEiJ_P0054887 protein_coding protein_coding MGP_WSBEiJ_T0010173.1 MGP_WSBEiJ_G0008330.1 mouse_genomes_project 2 7777223 7777327 + Gm23578 miRNA miRNA MGP_WSBEiJ_T0013094.1 MGP_WSBEiJ_G0011224.1 mouse_genomes_project 2 14525758 14526769 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001059.1 MGP_WSBEiJ_G0000994.1 mouse_genomes_project 2 104652843 104656248 - TEC TEC MGP_WSBEiJ_T0013493.1 MGP_WSBEiJ_G0011623.1 mouse_genomes_project 2 170817591 170818087 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004037.1 MGP_WSBEiJ_G0003574.1 mouse_genomes_project 2 150442881 150597390 + antisense antisense MGP_WSBEiJ_T0013357.1 MGP_WSBEiJ_G0011487.1 mouse_genomes_project 2 113305322 113306261 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054446.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77431975 77751511 - MGP_WSBEiJ_P0054446 Zfp385b protein_coding protein_coding MGP_WSBEiJ_T0054447.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77431975 77544322 - MGP_WSBEiJ_P0054447 Zfp385b protein_coding protein_coding MGP_WSBEiJ_T0054448.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77431975 77732980 - MGP_WSBEiJ_P0054448 Zfp385b protein_coding protein_coding MGP_WSBEiJ_T0054449.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77432440 77854608 - MGP_WSBEiJ_P0054449 Zfp385b protein_coding protein_coding MGP_WSBEiJ_T0054450.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77437252 77544318 - Zfp385b protein_coding processed_transcript MGP_WSBEiJ_T0054451.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77472459 77732980 - Zfp385b protein_coding processed_transcript MGP_WSBEiJ_T0054452.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77493935 77544239 - Zfp385b protein_coding processed_transcript MGP_WSBEiJ_T0054453.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77526404 77733087 - Zfp385b protein_coding processed_transcript MGP_WSBEiJ_T0054454.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77551860 77855051 - MGP_WSBEiJ_P0054454 Zfp385b protein_coding protein_coding MGP_WSBEiJ_T0054455.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77552610 77587174 - Zfp385b protein_coding processed_transcript MGP_WSBEiJ_T0054456.1 MGP_WSBEiJ_G0025136.1 mouse_genomes_project 2 77855028 77857425 - Zfp385b protein_coding processed_transcript MGP_WSBEiJ_T0004044.1 MGP_WSBEiJ_G0003580.1 mouse_genomes_project 2 155414844 155418203 - Gm14154 antisense antisense MGP_WSBEiJ_T0054689.1 MGP_WSBEiJ_G0025191.1 mouse_genomes_project 2 86064872 86065817 + MGP_WSBEiJ_P0054689 Olfr998 protein_coding protein_coding MGP_WSBEiJ_T0013349.1 MGP_WSBEiJ_G0011479.1 mouse_genomes_project 2 109958467 109959095 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013226.1 MGP_WSBEiJ_G0011356.1 mouse_genomes_project 2 65892743 65893115 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013235.1 MGP_WSBEiJ_G0011365.1 mouse_genomes_project 2 69395507 69396132 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054750.1 MGP_WSBEiJ_G0025249.1 mouse_genomes_project 2 87482934 87485061 - MGP_WSBEiJ_P0054750 protein_coding protein_coding MGP_WSBEiJ_T0057119.1 MGP_WSBEiJ_G0025873.1 mouse_genomes_project 2 152167923 152173742 - MGP_WSBEiJ_P0057119 9230104L09Rik protein_coding protein_coding MGP_WSBEiJ_T0057120.1 MGP_WSBEiJ_G0025873.1 mouse_genomes_project 2 152168116 152187396 - 9230104L09Rik protein_coding processed_transcript MGP_WSBEiJ_T0013145.1 MGP_WSBEiJ_G0011275.1 mouse_genomes_project 2 35352796 35353292 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011300.1 MGP_WSBEiJ_G0009457.1 mouse_genomes_project 2 48759230 48759340 - Gm25223 misc_RNA misc_RNA MGP_WSBEiJ_T0057783.1 MGP_WSBEiJ_G0026027.1 mouse_genomes_project 2 160997004 161074853 - MGP_WSBEiJ_P0057783 Mroh8 protein_coding protein_coding MGP_WSBEiJ_T0057784.1 MGP_WSBEiJ_G0026027.1 mouse_genomes_project 2 161012620 161014030 - Mroh8 protein_coding processed_transcript MGP_WSBEiJ_T0057785.1 MGP_WSBEiJ_G0026027.1 mouse_genomes_project 2 161030612 161074593 - Mroh8 protein_coding processed_transcript MGP_WSBEiJ_T0057786.1 MGP_WSBEiJ_G0026027.1 mouse_genomes_project 2 161044692 161049486 - Mroh8 protein_coding processed_transcript MGP_WSBEiJ_T0057787.1 MGP_WSBEiJ_G0026027.1 mouse_genomes_project 2 161055545 161074853 - Mroh8 protein_coding processed_transcript MGP_WSBEiJ_T0057032.1 MGP_WSBEiJ_G0025847.1 mouse_genomes_project 2 148986298 149024626 + MGP_WSBEiJ_P0057032 Rin2 protein_coding protein_coding MGP_WSBEiJ_T0057033.1 MGP_WSBEiJ_G0025847.1 mouse_genomes_project 2 148987546 149092367 + MGP_WSBEiJ_P0057033 Rin2 protein_coding protein_coding MGP_WSBEiJ_T0057034.1 MGP_WSBEiJ_G0025847.1 mouse_genomes_project 2 148987682 149092367 + MGP_WSBEiJ_P0057034 Rin2 protein_coding protein_coding MGP_WSBEiJ_T0057035.1 MGP_WSBEiJ_G0025847.1 mouse_genomes_project 2 148987728 149025028 + MGP_WSBEiJ_P0057035 Rin2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057036.1 MGP_WSBEiJ_G0025847.1 mouse_genomes_project 2 149024473 149048112 + Rin2 protein_coding processed_transcript MGP_WSBEiJ_T0057037.1 MGP_WSBEiJ_G0025847.1 mouse_genomes_project 2 149024612 149048381 + Rin2 protein_coding processed_transcript MGP_WSBEiJ_T0057038.1 MGP_WSBEiJ_G0025847.1 mouse_genomes_project 2 149066884 149083709 + Rin2 protein_coding processed_transcript MGP_WSBEiJ_T0054244.1 MGP_WSBEiJ_G0025091.1 mouse_genomes_project 2 71653946 71687539 + MGP_WSBEiJ_P0054244 Pdk1 protein_coding protein_coding MGP_WSBEiJ_T0054245.1 MGP_WSBEiJ_G0025091.1 mouse_genomes_project 2 71654042 71665666 + Pdk1 protein_coding processed_transcript MGP_WSBEiJ_T0054246.1 MGP_WSBEiJ_G0025091.1 mouse_genomes_project 2 71654048 71668046 + Pdk1 protein_coding processed_transcript MGP_WSBEiJ_T0054247.1 MGP_WSBEiJ_G0025091.1 mouse_genomes_project 2 71654068 71685667 + Pdk1 protein_coding processed_transcript MGP_WSBEiJ_T0054248.1 MGP_WSBEiJ_G0025091.1 mouse_genomes_project 2 71654273 71665918 + Pdk1 protein_coding processed_transcript MGP_WSBEiJ_T0054249.1 MGP_WSBEiJ_G0025091.1 mouse_genomes_project 2 71654465 71670686 + Pdk1 protein_coding processed_transcript MGP_WSBEiJ_T0054250.1 MGP_WSBEiJ_G0025091.1 mouse_genomes_project 2 71655802 71665341 + Pdk1 protein_coding processed_transcript MGP_WSBEiJ_T0054251.1 MGP_WSBEiJ_G0025091.1 mouse_genomes_project 2 71669151 71680174 + Pdk1 protein_coding processed_transcript MGP_WSBEiJ_T0051757.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 17553107 18396116 + MGP_WSBEiJ_P0051757 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051758.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 17925058 18462268 + MGP_WSBEiJ_P0051758 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051759.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 17925058 18309202 + MGP_WSBEiJ_P0051759 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051760.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 17990598 18309068 + MGP_WSBEiJ_P0051760 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051761.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18151311 18462257 + MGP_WSBEiJ_P0051761 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051762.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18151311 18462257 + MGP_WSBEiJ_P0051762 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051763.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18161253 18461619 + MGP_WSBEiJ_P0051763 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051764.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18161273 18360595 + Etl4 protein_coding retained_intron MGP_WSBEiJ_T0051765.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18161290 18462269 + MGP_WSBEiJ_P0051765 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051766.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18189216 18358275 + Etl4 protein_coding processed_transcript MGP_WSBEiJ_T0051767.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18189258 18309466 + Etl4 protein_coding processed_transcript MGP_WSBEiJ_T0051768.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18201203 18358365 + Etl4 protein_coding processed_transcript MGP_WSBEiJ_T0051769.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18362032 18395286 + Etl4 protein_coding processed_transcript MGP_WSBEiJ_T0051770.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18371849 18455160 + Etl4 protein_coding retained_intron MGP_WSBEiJ_T0051771.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18371849 18440930 + Etl4 protein_coding retained_intron MGP_WSBEiJ_T0051772.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18372096 18459924 + MGP_WSBEiJ_P0051772 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051773.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18387743 18462087 + MGP_WSBEiJ_P0051773 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051774.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18387743 18462446 + MGP_WSBEiJ_P0051774 Etl4 protein_coding protein_coding MGP_WSBEiJ_T0051775.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18450575 18460615 + Etl4 protein_coding processed_transcript MGP_WSBEiJ_T0051776.1 MGP_WSBEiJ_G0024652.1 mouse_genomes_project 2 18459182 18462257 + Etl4 protein_coding retained_intron MGP_WSBEiJ_T0055652.1 MGP_WSBEiJ_G0025544.1 mouse_genomes_project 2 114204327 114356332 + MGP_WSBEiJ_P0055652 Aven protein_coding protein_coding MGP_WSBEiJ_T0055653.1 MGP_WSBEiJ_G0025544.1 mouse_genomes_project 2 114277397 114351848 + Aven protein_coding processed_transcript MGP_WSBEiJ_T0055654.1 MGP_WSBEiJ_G0025544.1 mouse_genomes_project 2 114277749 114352683 + MGP_WSBEiJ_P0055654 Aven protein_coding protein_coding MGP_WSBEiJ_T0003984.1 MGP_WSBEiJ_G0003536.1 mouse_genomes_project 2 120729319 120732362 + Inafm2 antisense antisense MGP_WSBEiJ_T0054370.1 MGP_WSBEiJ_G0025119.1 mouse_genomes_project 2 74725459 74782670 + MGP_WSBEiJ_P0054370 Mtx2 protein_coding protein_coding MGP_WSBEiJ_T0054371.1 MGP_WSBEiJ_G0025119.1 mouse_genomes_project 2 74725486 74771353 + Mtx2 protein_coding retained_intron MGP_WSBEiJ_T0054372.1 MGP_WSBEiJ_G0025119.1 mouse_genomes_project 2 74771519 74780743 + Mtx2 protein_coding retained_intron MGP_WSBEiJ_T0010260.1 MGP_WSBEiJ_G0008417.1 mouse_genomes_project 2 76456878 76456989 + Gm23164 miRNA miRNA MGP_WSBEiJ_T0010257.1 MGP_WSBEiJ_G0008414.1 mouse_genomes_project 2 74614754 74614822 + Mir10b miRNA miRNA MGP_WSBEiJ_T0054722.1 MGP_WSBEiJ_G0025222.1 mouse_genomes_project 2 86745983 86746946 - MGP_WSBEiJ_P0054722 Olfr1048 protein_coding protein_coding MGP_WSBEiJ_T0013272.1 MGP_WSBEiJ_G0011402.1 mouse_genomes_project 2 82883579 82884108 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054760.1 MGP_WSBEiJ_G0025258.1 mouse_genomes_project 2 87682168 87683108 - MGP_WSBEiJ_P0054760 protein_coding protein_coding MGP_WSBEiJ_T0055444.1 MGP_WSBEiJ_G0025466.1 mouse_genomes_project 2 105430444 105430716 - MGP_WSBEiJ_P0055444 protein_coding protein_coding MGP_WSBEiJ_T0010289.1 MGP_WSBEiJ_G0008446.1 mouse_genomes_project 2 132621015 132621132 - Mir6339 miRNA miRNA MGP_WSBEiJ_T0054534.1 MGP_WSBEiJ_G0025151.1 mouse_genomes_project 2 80961336 80982972 + MGP_WSBEiJ_P0054534 protein_coding protein_coding MGP_WSBEiJ_T0056593.1 MGP_WSBEiJ_G0025750.1 mouse_genomes_project 2 132805297 132876196 + MGP_WSBEiJ_P0056593 Tmc2 protein_coding protein_coding MGP_WSBEiJ_T0056594.1 MGP_WSBEiJ_G0025750.1 mouse_genomes_project 2 132806631 132875968 + MGP_WSBEiJ_P0056594 Tmc2 protein_coding protein_coding MGP_WSBEiJ_T0052510.1 MGP_WSBEiJ_G0024787.1 mouse_genomes_project 2 26410373 26414213 - 1700007K13Rik protein_coding processed_transcript MGP_WSBEiJ_T0052511.1 MGP_WSBEiJ_G0024787.1 mouse_genomes_project 2 26410373 26414693 - MGP_WSBEiJ_P0052511 1700007K13Rik protein_coding protein_coding MGP_WSBEiJ_T0052512.1 MGP_WSBEiJ_G0024787.1 mouse_genomes_project 2 26410720 26414677 - MGP_WSBEiJ_P0052512 1700007K13Rik protein_coding protein_coding MGP_WSBEiJ_T0099344.1 MGP_WSBEiJ_G0038007.1 mouse_genomes_project 2 31263596 31263726 + snoRNA snoRNA MGP_WSBEiJ_T0013494.1 MGP_WSBEiJ_G0011624.1 mouse_genomes_project 2 171351511 171353204 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013224.1 MGP_WSBEiJ_G0011354.1 mouse_genomes_project 2 64684431 64685623 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097315.1 MGP_WSBEiJ_G0035990.1 mouse_genomes_project 2 4101466 4102695 - Gm10115 sense_intronic sense_intronic MGP_WSBEiJ_T0054852.1 MGP_WSBEiJ_G0025336.1 mouse_genomes_project 2 89956290 89957226 - MGP_WSBEiJ_P0054852 Olfr1221 protein_coding protein_coding MGP_WSBEiJ_T0098097.1 MGP_WSBEiJ_G0036760.1 mouse_genomes_project 2 36943889 36943997 + Gm25081 snRNA snRNA MGP_WSBEiJ_T0058384.1 MGP_WSBEiJ_G0026171.1 mouse_genomes_project 2 172634765 172660696 - MGP_WSBEiJ_P0058384 Adnp protein_coding protein_coding MGP_WSBEiJ_T0058385.1 MGP_WSBEiJ_G0026171.1 mouse_genomes_project 2 172634765 172660861 - MGP_WSBEiJ_P0058385 Adnp protein_coding protein_coding MGP_WSBEiJ_T0058387.1 MGP_WSBEiJ_G0026171.1 mouse_genomes_project 2 172638741 172660483 - Adnp protein_coding processed_transcript MGP_WSBEiJ_T0058388.1 MGP_WSBEiJ_G0026171.1 mouse_genomes_project 2 172658130 172660483 - Adnp protein_coding retained_intron MGP_WSBEiJ_T0013060.1 MGP_WSBEiJ_G0011190.1 mouse_genomes_project 2 670105 670894 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011322.1 MGP_WSBEiJ_G0009479.1 mouse_genomes_project 2 168939662 168939978 + Gm22596 misc_RNA misc_RNA MGP_WSBEiJ_T0054888.1 MGP_WSBEiJ_G0025363.1 mouse_genomes_project 2 90579179 90580136 - MGP_WSBEiJ_P0054888 Olfr1253 protein_coding protein_coding MGP_WSBEiJ_T0001011.1 MGP_WSBEiJ_G0000946.1 mouse_genomes_project 2 10546464 10548339 - TEC TEC MGP_WSBEiJ_T0013121.1 MGP_WSBEiJ_G0011251.1 mouse_genomes_project 2 22293441 22295053 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054691.1 MGP_WSBEiJ_G0025193.1 mouse_genomes_project 2 86134600 86135804 - MGP_WSBEiJ_P0054691 Olfr154 protein_coding protein_coding MGP_WSBEiJ_T0003894.1 MGP_WSBEiJ_G0003475.1 mouse_genomes_project 2 42709559 42715392 - Arhgap15os antisense antisense MGP_WSBEiJ_T0057542.1 MGP_WSBEiJ_G0025990.1 mouse_genomes_project 2 159441677 159441734 - MGP_WSBEiJ_P0057542 Gm17581 protein_coding protein_coding MGP_WSBEiJ_T0057876.1 MGP_WSBEiJ_G0026045.1 mouse_genomes_project 2 162379337 162421273 + MGP_WSBEiJ_P0057876 Arhgap40 protein_coding protein_coding MGP_WSBEiJ_T0057877.1 MGP_WSBEiJ_G0026045.1 mouse_genomes_project 2 162379337 162421407 + MGP_WSBEiJ_P0057877 Arhgap40 protein_coding protein_coding MGP_WSBEiJ_T0057878.1 MGP_WSBEiJ_G0026045.1 mouse_genomes_project 2 162412418 162421407 + Arhgap40 protein_coding retained_intron MGP_WSBEiJ_T0007272.1 MGP_WSBEiJ_G0005966.1 mouse_genomes_project 2 167182861 167204009 + Gm11454 lincRNA lincRNA MGP_WSBEiJ_T0054743.1 MGP_WSBEiJ_G0025242.1 mouse_genomes_project 2 87282170 87283112 - MGP_WSBEiJ_P0054743 Olfr1087 protein_coding protein_coding MGP_WSBEiJ_T0013216.1 MGP_WSBEiJ_G0011346.1 mouse_genomes_project 2 60261431 60262052 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010213.1 MGP_WSBEiJ_G0008370.1 mouse_genomes_project 2 17530134 17530210 + Gm44457 miRNA miRNA MGP_WSBEiJ_T0056790.1 MGP_WSBEiJ_G0025791.1 mouse_genomes_project 2 134674262 134716718 - MGP_WSBEiJ_P0056790 Rassf2 protein_coding protein_coding MGP_WSBEiJ_T0056791.1 MGP_WSBEiJ_G0025791.1 mouse_genomes_project 2 134677675 134716931 - MGP_WSBEiJ_P0056791 Rassf2 protein_coding protein_coding MGP_WSBEiJ_T0056792.1 MGP_WSBEiJ_G0025791.1 mouse_genomes_project 2 134686399 134707686 - Rassf2 protein_coding retained_intron MGP_WSBEiJ_T0056793.1 MGP_WSBEiJ_G0025791.1 mouse_genomes_project 2 134688380 134716987 - MGP_WSBEiJ_P0056793 Rassf2 protein_coding protein_coding MGP_WSBEiJ_T0056794.1 MGP_WSBEiJ_G0025791.1 mouse_genomes_project 2 134695162 134715883 - MGP_WSBEiJ_P0056794 Rassf2 protein_coding protein_coding MGP_WSBEiJ_T0007323.1 MGP_WSBEiJ_G0006010.1 mouse_genomes_project 2 186012679 186086406 - Gm14342 lincRNA lincRNA MGP_WSBEiJ_T0100748.1 MGP_WSBEiJ_G0039206.1 mouse_genomes_project 2 160644488 160675675 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007233.1 MGP_WSBEiJ_G0005933.1 mouse_genomes_project 2 140562609 140738299 + Gm14064 lincRNA lincRNA MGP_WSBEiJ_T0004000.1 MGP_WSBEiJ_G0003549.1 mouse_genomes_project 2 131757014 131758467 - Gm14029 antisense antisense MGP_WSBEiJ_T0057300.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156483069 156529933 + MGP_WSBEiJ_P0057300 Ttll9 protein_coding protein_coding MGP_WSBEiJ_T0057301.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156483090 156525836 + MGP_WSBEiJ_P0057301 Ttll9 protein_coding protein_coding MGP_WSBEiJ_T0057302.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156483090 156525785 + MGP_WSBEiJ_P0057302 Ttll9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057303.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156483090 156525792 + MGP_WSBEiJ_P0057303 Ttll9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057304.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156483095 156529564 + MGP_WSBEiJ_P0057304 Ttll9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057305.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156493837 156529933 + MGP_WSBEiJ_P0057305 Ttll9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057306.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156495115 156505844 + MGP_WSBEiJ_P0057306 Ttll9 protein_coding protein_coding MGP_WSBEiJ_T0057307.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156510999 156520802 + Ttll9 protein_coding retained_intron MGP_WSBEiJ_T0057308.1 MGP_WSBEiJ_G0025932.1 mouse_genomes_project 2 156525386 156531075 + Ttll9 protein_coding retained_intron MGP_WSBEiJ_T0057385.1 MGP_WSBEiJ_G0025953.1 mouse_genomes_project 2 157575712 157601372 + MGP_WSBEiJ_P0057385 Bpifa6 protein_coding protein_coding MGP_WSBEiJ_T0054688.1 MGP_WSBEiJ_G0025190.1 mouse_genomes_project 2 86050963 86052061 + MGP_WSBEiJ_P0054688 Olfr996 protein_coding protein_coding MGP_WSBEiJ_T0052075.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23098363 23102433 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0052076.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23098374 23102419 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0052077.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23098377 23098962 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0052078.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23098377 23102447 - MGP_WSBEiJ_P0052078 Dpp7 protein_coding protein_coding MGP_WSBEiJ_T0052079.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23099241 23102146 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0052080.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23099447 23102385 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0052081.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23100555 23102385 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0052082.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23101084 23102441 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0052083.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23101529 23102434 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0052084.1 MGP_WSBEiJ_G0024706.1 mouse_genomes_project 2 23101790 23102420 - Dpp7 protein_coding processed_transcript MGP_WSBEiJ_T0010308.1 MGP_WSBEiJ_G0008465.1 mouse_genomes_project 2 167122991 167123057 + Mir7003 miRNA miRNA MGP_WSBEiJ_T0100723.1 MGP_WSBEiJ_G0039181.1 mouse_genomes_project 2 88542848 88543715 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0054830.1 MGP_WSBEiJ_G0025316.1 mouse_genomes_project 2 89440420 89441347 - MGP_WSBEiJ_P0054830 Olfr1195 protein_coding protein_coding MGP_WSBEiJ_T0057734.1 MGP_WSBEiJ_G0026016.1 mouse_genomes_project 2 160527804 160535169 + MGP_WSBEiJ_P0057734 Myl9 protein_coding protein_coding MGP_WSBEiJ_T0057735.1 MGP_WSBEiJ_G0026016.1 mouse_genomes_project 2 160527838 160534872 + Myl9 protein_coding processed_transcript MGP_WSBEiJ_T0057736.1 MGP_WSBEiJ_G0026016.1 mouse_genomes_project 2 160527841 160534045 + Myl9 protein_coding processed_transcript MGP_WSBEiJ_T0057737.1 MGP_WSBEiJ_G0026016.1 mouse_genomes_project 2 160532027 160534675 + Myl9 protein_coding processed_transcript MGP_WSBEiJ_T0056989.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147546562 147550987 + Csrp2bp protein_coding processed_transcript MGP_WSBEiJ_T0056990.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147546570 147590512 + MGP_WSBEiJ_P0056990 Csrp2bp protein_coding protein_coding MGP_WSBEiJ_T0056992.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147551396 147573015 + MGP_WSBEiJ_P0056992 Csrp2bp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056993.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147552980 147568931 + Csrp2bp protein_coding processed_transcript MGP_WSBEiJ_T0056994.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147553445 147580372 + Csrp2bp protein_coding processed_transcript MGP_WSBEiJ_T0056995.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147568648 147573080 + Csrp2bp protein_coding retained_intron MGP_WSBEiJ_T0056996.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147568662 147573061 + Csrp2bp protein_coding processed_transcript MGP_WSBEiJ_T0056997.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147581942 147588692 + Csrp2bp protein_coding retained_intron MGP_WSBEiJ_T0056998.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147582142 147583950 + MGP_WSBEiJ_P0056998 Csrp2bp protein_coding protein_coding MGP_WSBEiJ_T0056999.1 MGP_WSBEiJ_G0025837.1 mouse_genomes_project 2 147583674 147588693 + MGP_WSBEiJ_P0056999 Csrp2bp protein_coding protein_coding MGP_WSBEiJ_T0011318.1 MGP_WSBEiJ_G0009475.1 mouse_genomes_project 2 150569671 150570129 + Nkx2-2os misc_RNA misc_RNA MGP_WSBEiJ_T0051892.1 MGP_WSBEiJ_G0024676.1 mouse_genomes_project 2 22097384 22152234 - MGP_WSBEiJ_P0051892 Pax8 protein_coding protein_coding MGP_WSBEiJ_T0051893.1 MGP_WSBEiJ_G0024676.1 mouse_genomes_project 2 22098217 22099906 - Pax8 protein_coding retained_intron MGP_WSBEiJ_T0051894.1 MGP_WSBEiJ_G0024676.1 mouse_genomes_project 2 22098343 22151732 - MGP_WSBEiJ_P0051894 Pax8 protein_coding protein_coding MGP_WSBEiJ_T0051895.1 MGP_WSBEiJ_G0024676.1 mouse_genomes_project 2 22098354 22152199 - MGP_WSBEiJ_P0051895 Pax8 protein_coding protein_coding MGP_WSBEiJ_T0051896.1 MGP_WSBEiJ_G0024676.1 mouse_genomes_project 2 22106324 22152209 - MGP_WSBEiJ_P0051896 Pax8 protein_coding protein_coding MGP_WSBEiJ_T0051897.1 MGP_WSBEiJ_G0024676.1 mouse_genomes_project 2 22117955 22151850 - MGP_WSBEiJ_P0051897 Pax8 protein_coding protein_coding MGP_WSBEiJ_T0051898.1 MGP_WSBEiJ_G0024676.1 mouse_genomes_project 2 22119776 22122679 - Pax8 protein_coding processed_transcript MGP_WSBEiJ_T0051899.1 MGP_WSBEiJ_G0024676.1 mouse_genomes_project 2 22148528 22152209 - Pax8 protein_coding retained_intron MGP_WSBEiJ_T0013156.1 MGP_WSBEiJ_G0011286.1 mouse_genomes_project 2 37726513 37726876 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010299.1 MGP_WSBEiJ_G0008456.1 mouse_genomes_project 2 156278872 156278955 - Gm23802 miRNA miRNA MGP_WSBEiJ_T0007090.1 MGP_WSBEiJ_G0005816.1 mouse_genomes_project 2 46851029 47253166 - lincRNA lincRNA MGP_WSBEiJ_T0010171.1 MGP_WSBEiJ_G0008328.1 mouse_genomes_project 2 7776649 7776768 + Mir669e miRNA miRNA MGP_WSBEiJ_T0056722.1 MGP_WSBEiJ_G0025776.1 mouse_genomes_project 2 133791578 133792297 + MGP_WSBEiJ_P0056722 Gm11037 protein_coding protein_coding MGP_WSBEiJ_T0097322.1 MGP_WSBEiJ_G0035997.1 mouse_genomes_project 2 164556414 164558252 + Gm14222 sense_intronic sense_intronic MGP_WSBEiJ_T0007241.1 MGP_WSBEiJ_G0005940.1 mouse_genomes_project 2 150984593 150992993 + A530006G24Rik lincRNA lincRNA MGP_WSBEiJ_T0057241.1 MGP_WSBEiJ_G0025905.1 mouse_genomes_project 2 155820678 155827240 - MGP_WSBEiJ_P0057241 Trib3 protein_coding protein_coding MGP_WSBEiJ_T0057242.1 MGP_WSBEiJ_G0025905.1 mouse_genomes_project 2 155823004 155827196 - Trib3 protein_coding processed_transcript MGP_WSBEiJ_T0057243.1 MGP_WSBEiJ_G0025905.1 mouse_genomes_project 2 155826161 155827178 - Trib3 protein_coding retained_intron MGP_WSBEiJ_T0007094.1 MGP_WSBEiJ_G0005820.1 mouse_genomes_project 2 50135178 50192386 + Gm13497 lincRNA lincRNA MGP_WSBEiJ_T0098103.1 MGP_WSBEiJ_G0036766.1 mouse_genomes_project 2 62759116 62759223 - Gm23503 snRNA snRNA MGP_WSBEiJ_T0053261.1 MGP_WSBEiJ_G0024901.1 mouse_genomes_project 2 32063193 32226523 - MGP_WSBEiJ_P0053261 Mvb12b protein_coding protein_coding MGP_WSBEiJ_T0053262.1 MGP_WSBEiJ_G0024901.1 mouse_genomes_project 2 32121215 32124663 - Mvb12b protein_coding retained_intron MGP_WSBEiJ_T0053263.1 MGP_WSBEiJ_G0024901.1 mouse_genomes_project 2 32123072 32225422 - Mvb12b protein_coding processed_transcript MGP_WSBEiJ_T0053264.1 MGP_WSBEiJ_G0024901.1 mouse_genomes_project 2 32162078 32225422 - MGP_WSBEiJ_P0053264 Mvb12b protein_coding protein_coding MGP_WSBEiJ_T0053265.1 MGP_WSBEiJ_G0024901.1 mouse_genomes_project 2 32212195 32226059 - Mvb12b protein_coding processed_transcript MGP_WSBEiJ_T0013200.1 MGP_WSBEiJ_G0011330.1 mouse_genomes_project 2 56192755 56193445 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013139.1 MGP_WSBEiJ_G0011269.1 mouse_genomes_project 2 32800665 32800921 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052395.1 MGP_WSBEiJ_G0024765.1 mouse_genomes_project 2 24777582 24780483 + MGP_WSBEiJ_P0052395 Rpl7a protein_coding protein_coding MGP_WSBEiJ_T0052396.1 MGP_WSBEiJ_G0024765.1 mouse_genomes_project 2 24777635 24779876 + Rpl7a protein_coding processed_transcript MGP_WSBEiJ_T0052397.1 MGP_WSBEiJ_G0024765.1 mouse_genomes_project 2 24777639 24780483 + Rpl7a protein_coding processed_transcript MGP_WSBEiJ_T0052398.1 MGP_WSBEiJ_G0024765.1 mouse_genomes_project 2 24777646 24780487 + MGP_WSBEiJ_P0052398 Rpl7a protein_coding unknown_likely_coding MGP_WSBEiJ_T0052399.1 MGP_WSBEiJ_G0024765.1 mouse_genomes_project 2 24777824 24780483 + Rpl7a protein_coding processed_transcript MGP_WSBEiJ_T0052400.1 MGP_WSBEiJ_G0024765.1 mouse_genomes_project 2 24779010 24780483 + Rpl7a protein_coding processed_transcript MGP_WSBEiJ_T0052401.1 MGP_WSBEiJ_G0024765.1 mouse_genomes_project 2 24779437 24780483 + Rpl7a protein_coding processed_transcript MGP_WSBEiJ_T0052402.1 MGP_WSBEiJ_G0024765.1 mouse_genomes_project 2 24779489 24780031 + Rpl7a protein_coding processed_transcript MGP_WSBEiJ_T0013404.1 MGP_WSBEiJ_G0011534.1 mouse_genomes_project 2 135718464 135719464 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010316.1 MGP_WSBEiJ_G0008473.1 mouse_genomes_project 2 177713545 177713623 - Gm22773 miRNA miRNA MGP_WSBEiJ_T0003820.1 MGP_WSBEiJ_G0003417.1 mouse_genomes_project 2 7157410 7159027 + Gm13256 antisense antisense MGP_WSBEiJ_T0099338.1 MGP_WSBEiJ_G0038001.1 mouse_genomes_project 2 24779348 24779419 + Gm24134 snoRNA snoRNA MGP_WSBEiJ_T0052039.1 MGP_WSBEiJ_G0024698.1 mouse_genomes_project 2 22994561 22995415 + MGP_WSBEiJ_P0052039 Tmem203 protein_coding protein_coding MGP_WSBEiJ_T0058465.1 MGP_WSBEiJ_G0026193.1 mouse_genomes_project 2 177190648 177231727 + MGP_WSBEiJ_P0058465 Cass4 protein_coding protein_coding MGP_WSBEiJ_T0058466.1 MGP_WSBEiJ_G0026193.1 mouse_genomes_project 2 177190675 177236597 + MGP_WSBEiJ_P0058466 Cass4 protein_coding protein_coding MGP_WSBEiJ_T0058467.1 MGP_WSBEiJ_G0026193.1 mouse_genomes_project 2 177190754 177235700 + MGP_WSBEiJ_P0058467 Cass4 protein_coding protein_coding MGP_WSBEiJ_T0058468.1 MGP_WSBEiJ_G0026193.1 mouse_genomes_project 2 177190824 177236486 + MGP_WSBEiJ_P0058468 Cass4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0013172.1 MGP_WSBEiJ_G0011302.1 mouse_genomes_project 2 44558343 44559342 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013178.1 MGP_WSBEiJ_G0011308.1 mouse_genomes_project 2 48003471 48003900 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056275.1 MGP_WSBEiJ_G0025672.1 mouse_genomes_project 2 124964458 124987330 - MGP_WSBEiJ_P0056275 Slc30a4 protein_coding protein_coding MGP_WSBEiJ_T0056276.1 MGP_WSBEiJ_G0025672.1 mouse_genomes_project 2 124968584 124987354 - MGP_WSBEiJ_P0056276 Slc30a4 protein_coding protein_coding MGP_WSBEiJ_T0052520.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26459989 26489765 + MGP_WSBEiJ_P0052520 Ralgds protein_coding protein_coding MGP_WSBEiJ_T0052521.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26460190 26499892 + MGP_WSBEiJ_P0052521 Ralgds protein_coding protein_coding MGP_WSBEiJ_T0052522.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26480203 26499877 + MGP_WSBEiJ_P0052522 Ralgds protein_coding protein_coding MGP_WSBEiJ_T0052523.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26480390 26499447 + MGP_WSBEiJ_P0052523 Ralgds protein_coding protein_coding MGP_WSBEiJ_T0052524.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26480397 26499881 + Ralgds protein_coding retained_intron MGP_WSBEiJ_T0052525.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26487540 26489717 + Ralgds protein_coding retained_intron MGP_WSBEiJ_T0052526.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26489147 26491887 + MGP_WSBEiJ_P0052526 Ralgds protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052527.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26492103 26494031 + Ralgds protein_coding retained_intron MGP_WSBEiJ_T0052528.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26494360 26495787 + Ralgds protein_coding retained_intron MGP_WSBEiJ_T0052529.1 MGP_WSBEiJ_G0024791.1 mouse_genomes_project 2 26495868 26499136 + MGP_WSBEiJ_P0052529 Ralgds protein_coding protein_coding MGP_WSBEiJ_T0055599.1 MGP_WSBEiJ_G0025504.1 mouse_genomes_project 2 112865259 112866198 - MGP_WSBEiJ_P0055599 Olfr1275 protein_coding protein_coding MGP_WSBEiJ_T0003919.1 MGP_WSBEiJ_G0003495.1 mouse_genomes_project 2 69524465 69528218 + Mettl5os antisense antisense MGP_WSBEiJ_T0053622.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43680760 43817207 - MGP_WSBEiJ_P0053622 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053623.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43684254 43811852 - MGP_WSBEiJ_P0053623 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053624.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43684256 43812146 - MGP_WSBEiJ_P0053624 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053625.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43684256 43809415 - MGP_WSBEiJ_P0053625 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053626.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43685467 43811869 - MGP_WSBEiJ_P0053626 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053627.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43685534 43809188 - MGP_WSBEiJ_P0053627 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053628.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43685575 43811757 - MGP_WSBEiJ_P0053628 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053629.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43693962 43809352 - MGP_WSBEiJ_P0053629 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053630.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43698853 43810073 - MGP_WSBEiJ_P0053630 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053631.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43698878 43719915 - MGP_WSBEiJ_P0053631 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053632.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43698944 43809144 - MGP_WSBEiJ_P0053632 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053633.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43699842 43751299 - Zeb2 protein_coding processed_transcript MGP_WSBEiJ_T0053634.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43699844 43810055 - MGP_WSBEiJ_P0053634 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053635.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43705684 43809975 - Zeb2 protein_coding processed_transcript MGP_WSBEiJ_T0053636.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43714546 43812135 - MGP_WSBEiJ_P0053636 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053637.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43717884 43811956 - Zeb2 protein_coding retained_intron MGP_WSBEiJ_T0053638.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43717917 43812112 - Zeb2 protein_coding retained_intron MGP_WSBEiJ_T0053639.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43719903 43809527 - MGP_WSBEiJ_P0053639 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053640.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43719988 43812151 - MGP_WSBEiJ_P0053640 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053641.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43720059 43809654 - MGP_WSBEiJ_P0053641 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053642.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43794545 43809633 - MGP_WSBEiJ_P0053642 Zeb2 protein_coding protein_coding MGP_WSBEiJ_T0053643.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43803015 43812115 - Zeb2 protein_coding processed_transcript MGP_WSBEiJ_T0053644.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43803015 43809387 - Zeb2 protein_coding processed_transcript MGP_WSBEiJ_T0053645.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43803015 43812083 - Zeb2 protein_coding processed_transcript MGP_WSBEiJ_T0053646.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43804234 43808976 - Zeb2 protein_coding processed_transcript MGP_WSBEiJ_T0053647.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43805095 43809384 - Zeb2 protein_coding processed_transcript MGP_WSBEiJ_T0053648.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43805454 43811868 - Zeb2 protein_coding retained_intron MGP_WSBEiJ_T0053649.1 MGP_WSBEiJ_G0024982.1 mouse_genomes_project 2 43808988 43813285 - Zeb2 protein_coding processed_transcript MGP_WSBEiJ_T0001004.1 MGP_WSBEiJ_G0000939.1 mouse_genomes_project 2 9749926 9752974 - TEC TEC MGP_WSBEiJ_T0058070.1 MGP_WSBEiJ_G0026101.1 mouse_genomes_project 2 168591902 168627489 + MGP_WSBEiJ_P0058070 Gm20458 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056781.1 MGP_WSBEiJ_G0025786.1 mouse_genomes_project 2 134218943 134235571 - MGP_WSBEiJ_P0056781 Adra1d protein_coding protein_coding MGP_WSBEiJ_T0013413.1 MGP_WSBEiJ_G0011543.1 mouse_genomes_project 2 143117211 143117592 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099339.1 MGP_WSBEiJ_G0038002.1 mouse_genomes_project 2 29360442 29360566 + Gm22516 snoRNA snoRNA MGP_WSBEiJ_T0053574.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37570976 37699897 - MGP_WSBEiJ_P0053574 protein_coding protein_coding MGP_WSBEiJ_T0053575.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37579527 37699868 - MGP_WSBEiJ_P0053575 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053576.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37579769 37699855 - MGP_WSBEiJ_P0053576 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053577.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37579834 37605350 - MGP_WSBEiJ_P0053577 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053578.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37585905 37699893 - MGP_WSBEiJ_P0053578 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053579.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37607346 37699897 - protein_coding retained_intron MGP_WSBEiJ_T0053580.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37609404 37699893 - protein_coding retained_intron MGP_WSBEiJ_T0053581.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37612631 37614686 - protein_coding retained_intron MGP_WSBEiJ_T0053582.1 MGP_WSBEiJ_G0024975.1 mouse_genomes_project 2 37612780 37627085 - protein_coding retained_intron MGP_WSBEiJ_T0055622.1 MGP_WSBEiJ_G0025527.1 mouse_genomes_project 2 113651439 113652402 - MGP_WSBEiJ_P0055622 Olfr1308 protein_coding protein_coding MGP_WSBEiJ_T0099343.1 MGP_WSBEiJ_G0038006.1 mouse_genomes_project 2 31124595 31124723 + Gm24165 snoRNA snoRNA MGP_WSBEiJ_T0052293.1 MGP_WSBEiJ_G0024750.1 mouse_genomes_project 2 24195980 24203541 - MGP_WSBEiJ_P0052293 Card9 protein_coding protein_coding MGP_WSBEiJ_T0052294.1 MGP_WSBEiJ_G0024750.1 mouse_genomes_project 2 24195991 24196572 - Card9 protein_coding processed_transcript MGP_WSBEiJ_T0052295.1 MGP_WSBEiJ_G0024750.1 mouse_genomes_project 2 24195991 24204712 - MGP_WSBEiJ_P0052295 Card9 protein_coding protein_coding MGP_WSBEiJ_T0013186.1 MGP_WSBEiJ_G0011316.1 mouse_genomes_project 2 50459678 50460774 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054084.1 MGP_WSBEiJ_G0025060.1 mouse_genomes_project 2 68786601 68805096 + G6pc2 protein_coding processed_transcript MGP_WSBEiJ_T0054085.1 MGP_WSBEiJ_G0025060.1 mouse_genomes_project 2 68798391 68806254 + MGP_WSBEiJ_P0054085 G6pc2 protein_coding protein_coding MGP_WSBEiJ_T0054086.1 MGP_WSBEiJ_G0025060.1 mouse_genomes_project 2 68798418 68806254 + MGP_WSBEiJ_P0054086 G6pc2 protein_coding protein_coding MGP_WSBEiJ_T0054087.1 MGP_WSBEiJ_G0025060.1 mouse_genomes_project 2 68798448 68805248 + G6pc2 protein_coding processed_transcript MGP_WSBEiJ_T0011287.1 MGP_WSBEiJ_G0009444.1 mouse_genomes_project 2 5663311 5663602 - Gm24534 misc_RNA misc_RNA MGP_WSBEiJ_T0100744.1 MGP_WSBEiJ_G0039202.1 mouse_genomes_project 2 156751971 156752639 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010313.1 MGP_WSBEiJ_G0008470.1 mouse_genomes_project 2 172631929 172632026 - Gm24561 miRNA miRNA MGP_WSBEiJ_T0099374.1 MGP_WSBEiJ_G0038037.1 mouse_genomes_project 2 109376280 109376412 - Gm23439 snoRNA snoRNA MGP_WSBEiJ_T0013150.1 MGP_WSBEiJ_G0011280.1 mouse_genomes_project 2 36101344 36101720 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010284.1 MGP_WSBEiJ_G0008441.1 mouse_genomes_project 2 124227353 124227427 + miRNA miRNA MGP_WSBEiJ_T0017186.1 MGP_WSBEiJ_G0014841.1 mouse_genomes_project 2 56299314 56307667 + 4930555B11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0007059.1 MGP_WSBEiJ_G0005793.1 mouse_genomes_project 2 26018188 26050397 + F730016J06Rik lincRNA lincRNA MGP_WSBEiJ_T0007060.1 MGP_WSBEiJ_G0005793.1 mouse_genomes_project 2 26018194 26036526 + F730016J06Rik lincRNA lincRNA MGP_WSBEiJ_T0007061.1 MGP_WSBEiJ_G0005793.1 mouse_genomes_project 2 26040881 26047869 + F730016J06Rik lincRNA lincRNA MGP_WSBEiJ_T0053886.1 MGP_WSBEiJ_G0025026.1 mouse_genomes_project 2 59600668 59746050 - MGP_WSBEiJ_P0053886 Pla2r1 protein_coding protein_coding MGP_WSBEiJ_T0053887.1 MGP_WSBEiJ_G0025026.1 mouse_genomes_project 2 59603150 59608793 - Pla2r1 protein_coding processed_transcript MGP_WSBEiJ_T0053888.1 MGP_WSBEiJ_G0025026.1 mouse_genomes_project 2 59627160 59629695 - Pla2r1 protein_coding retained_intron MGP_WSBEiJ_T0053889.1 MGP_WSBEiJ_G0025026.1 mouse_genomes_project 2 59637356 59746050 - Pla2r1 protein_coding retained_intron MGP_WSBEiJ_T0053890.1 MGP_WSBEiJ_G0025026.1 mouse_genomes_project 2 59638221 59641484 - Pla2r1 protein_coding retained_intron MGP_WSBEiJ_T0053891.1 MGP_WSBEiJ_G0025026.1 mouse_genomes_project 2 59725003 59746050 - Pla2r1 protein_coding retained_intron MGP_WSBEiJ_T0017221.1 MGP_WSBEiJ_G0014867.1 mouse_genomes_project 2 93892382 93898518 + 4631405J19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017222.1 MGP_WSBEiJ_G0014867.1 mouse_genomes_project 2 93892382 93898518 + 4631405J19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017223.1 MGP_WSBEiJ_G0014867.1 mouse_genomes_project 2 93893774 93898545 + 4631405J19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017224.1 MGP_WSBEiJ_G0014867.1 mouse_genomes_project 2 93893775 93896818 + 4631405J19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017225.1 MGP_WSBEiJ_G0014867.1 mouse_genomes_project 2 93894869 93909842 + 4631405J19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0054841.1 MGP_WSBEiJ_G0025327.1 mouse_genomes_project 2 89775865 89776801 - MGP_WSBEiJ_P0054841 Olfr1211 protein_coding protein_coding MGP_WSBEiJ_T0017141.1 MGP_WSBEiJ_G0014815.1 mouse_genomes_project 2 11506296 11509896 - Stamos processed_transcript antisense MGP_WSBEiJ_T0017142.1 MGP_WSBEiJ_G0014815.1 mouse_genomes_project 2 11508449 11509810 - Stamos processed_transcript retained_intron MGP_WSBEiJ_T0054540.1 MGP_WSBEiJ_G0025153.1 mouse_genomes_project 2 83320028 83385656 + MGP_WSBEiJ_P0054540 Fsip2 protein_coding protein_coding MGP_WSBEiJ_T0054541.1 MGP_WSBEiJ_G0025153.1 mouse_genomes_project 2 83327065 83341563 + MGP_WSBEiJ_P0054541 Fsip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054542.1 MGP_WSBEiJ_G0025153.1 mouse_genomes_project 2 83356560 83385656 + MGP_WSBEiJ_P0054542 Fsip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056904.1 MGP_WSBEiJ_G0025814.1 mouse_genomes_project 2 139746967 139764480 - MGP_WSBEiJ_P0056904 Mkks protein_coding protein_coding MGP_WSBEiJ_T0056905.1 MGP_WSBEiJ_G0025814.1 mouse_genomes_project 2 139746967 139764487 - MGP_WSBEiJ_P0056905 Mkks protein_coding protein_coding MGP_WSBEiJ_T0056906.1 MGP_WSBEiJ_G0025814.1 mouse_genomes_project 2 139754406 139764252 - MGP_WSBEiJ_P0056906 Mkks protein_coding protein_coding MGP_WSBEiJ_T0055475.1 MGP_WSBEiJ_G0025474.1 mouse_genomes_project 2 106138059 106204552 - MGP_WSBEiJ_P0055475 Qser1 protein_coding protein_coding MGP_WSBEiJ_T0010227.1 MGP_WSBEiJ_G0008384.1 mouse_genomes_project 2 27864509 27864606 - Mir219a-2 miRNA miRNA MGP_WSBEiJ_T0013412.1 MGP_WSBEiJ_G0011542.1 mouse_genomes_project 2 142851507 142851935 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055321.1 MGP_WSBEiJ_G0025443.1 mouse_genomes_project 2 102856429 102867654 - MGP_WSBEiJ_P0055321 Rag1 protein_coding protein_coding MGP_WSBEiJ_T0058559.1 MGP_WSBEiJ_G0026221.1 mouse_genomes_project 2 179721780 179745173 + MGP_WSBEiJ_P0058559 Edn3 protein_coding protein_coding MGP_WSBEiJ_T0058560.1 MGP_WSBEiJ_G0026221.1 mouse_genomes_project 2 179721960 179743111 + MGP_WSBEiJ_P0058560 Edn3 protein_coding protein_coding MGP_WSBEiJ_T0058561.1 MGP_WSBEiJ_G0026221.1 mouse_genomes_project 2 179722211 179743716 + Edn3 protein_coding retained_intron MGP_WSBEiJ_T0058562.1 MGP_WSBEiJ_G0026221.1 mouse_genomes_project 2 179731080 179743671 + Edn3 protein_coding processed_transcript MGP_WSBEiJ_T0097029.1 MGP_WSBEiJ_G0035710.1 mouse_genomes_project 2 114179687 114179801 - n-R5s202 rRNA rRNA MGP_WSBEiJ_T0007032.1 MGP_WSBEiJ_G0005772.1 mouse_genomes_project 2 6839792 6847713 - Gm13218 lincRNA lincRNA MGP_WSBEiJ_T0013134.1 MGP_WSBEiJ_G0011264.1 mouse_genomes_project 2 29852795 29853753 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053228.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31288377 31398037 - MGP_WSBEiJ_P0053228 Garnl3 protein_coding protein_coding MGP_WSBEiJ_T0053229.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31288527 31397150 - MGP_WSBEiJ_P0053229 Garnl3 protein_coding protein_coding MGP_WSBEiJ_T0053230.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31288527 31443717 - MGP_WSBEiJ_P0053230 Garnl3 protein_coding protein_coding MGP_WSBEiJ_T0053231.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31309573 31313270 - Garnl3 protein_coding retained_intron MGP_WSBEiJ_T0053232.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31313941 31417507 - Garnl3 protein_coding processed_transcript MGP_WSBEiJ_T0053233.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31319912 31340788 - MGP_WSBEiJ_P0053233 Garnl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053234.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31323987 31333192 - Garnl3 protein_coding retained_intron MGP_WSBEiJ_T0053235.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31356882 31397584 - Garnl3 protein_coding processed_transcript MGP_WSBEiJ_T0053236.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31364466 31397339 - Garnl3 protein_coding processed_transcript MGP_WSBEiJ_T0053237.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31364471 31443931 - MGP_WSBEiJ_P0053237 Garnl3 protein_coding protein_coding MGP_WSBEiJ_T0053238.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31364473 31443935 - MGP_WSBEiJ_P0053238 Garnl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053239.1 MGP_WSBEiJ_G0024895.1 mouse_genomes_project 2 31364518 31442889 - MGP_WSBEiJ_P0053239 Garnl3 protein_coding protein_coding MGP_WSBEiJ_T0054654.1 MGP_WSBEiJ_G0025178.1 mouse_genomes_project 2 85399354 85403981 + MGP_WSBEiJ_P0054654 Prg2 protein_coding protein_coding MGP_WSBEiJ_T0003807.1 MGP_WSBEiJ_G0003408.1 mouse_genomes_project 2 750865 753056 - Gm13185 antisense antisense MGP_WSBEiJ_T0057252.1 MGP_WSBEiJ_G0025911.1 mouse_genomes_project 2 155969527 155972395 + MGP_WSBEiJ_P0057252 Defb20 protein_coding protein_coding MGP_WSBEiJ_T0054869.1 MGP_WSBEiJ_G0025349.1 mouse_genomes_project 2 90225192 90226140 - MGP_WSBEiJ_P0054869 Olfr1238 protein_coding protein_coding MGP_WSBEiJ_T0058558.1 MGP_WSBEiJ_G0026220.1 mouse_genomes_project 2 179552601 179669594 + MGP_WSBEiJ_P0058558 Zfp831 protein_coding unknown_likely_coding MGP_WSBEiJ_T0056131.1 MGP_WSBEiJ_G0025637.1 mouse_genomes_project 2 123388313 123409597 + MGP_WSBEiJ_P0056131 Map1a protein_coding protein_coding MGP_WSBEiJ_T0056132.1 MGP_WSBEiJ_G0025637.1 mouse_genomes_project 2 123388483 123389757 + Map1a protein_coding processed_transcript MGP_WSBEiJ_T0056133.1 MGP_WSBEiJ_G0025637.1 mouse_genomes_project 2 123394192 123408198 + MGP_WSBEiJ_P0056133 Map1a protein_coding protein_coding MGP_WSBEiJ_T0056134.1 MGP_WSBEiJ_G0025637.1 mouse_genomes_project 2 123394201 123406381 + Map1a protein_coding processed_transcript MGP_WSBEiJ_T0057334.1 MGP_WSBEiJ_G0025938.1 mouse_genomes_project 2 156750029 156753101 - MGP_WSBEiJ_P0057334 Tspyl3 protein_coding protein_coding MGP_WSBEiJ_T0007047.1 MGP_WSBEiJ_G0005784.1 mouse_genomes_project 2 21993943 21994476 + Gm13411 lincRNA lincRNA MGP_WSBEiJ_T0057212.1 MGP_WSBEiJ_G0025896.1 mouse_genomes_project 2 155376319 155411669 + MGP_WSBEiJ_P0057212 Angpt4 protein_coding protein_coding MGP_WSBEiJ_T0003866.1 MGP_WSBEiJ_G0003451.1 mouse_genomes_project 2 28479215 28480838 + Gm16323 antisense antisense MGP_WSBEiJ_T0013064.1 MGP_WSBEiJ_G0011194.1 mouse_genomes_project 2 1722484 1722853 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007322.1 MGP_WSBEiJ_G0006009.1 mouse_genomes_project 2 185999665 186007912 - Gm14340 lincRNA lincRNA MGP_WSBEiJ_T0056493.1 MGP_WSBEiJ_G0025723.1 mouse_genomes_project 2 130300094 130332533 - MGP_WSBEiJ_P0056493 Bub1 protein_coding protein_coding MGP_WSBEiJ_T0056494.1 MGP_WSBEiJ_G0025723.1 mouse_genomes_project 2 130303474 130304237 - Bub1 protein_coding retained_intron MGP_WSBEiJ_T0056495.1 MGP_WSBEiJ_G0025723.1 mouse_genomes_project 2 130308337 130313705 - Bub1 protein_coding processed_transcript MGP_WSBEiJ_T0056496.1 MGP_WSBEiJ_G0025723.1 mouse_genomes_project 2 130310375 130314756 - Bub1 protein_coding processed_transcript MGP_WSBEiJ_T0056497.1 MGP_WSBEiJ_G0025723.1 mouse_genomes_project 2 130323293 130332472 - Bub1 protein_coding retained_intron MGP_WSBEiJ_T0010200.1 MGP_WSBEiJ_G0008357.1 mouse_genomes_project 2 7828559 7828653 + Mir466n miRNA miRNA MGP_WSBEiJ_T0017189.1 MGP_WSBEiJ_G0014843.1 mouse_genomes_project 2 58509719 58513896 - 5330411J11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017190.1 MGP_WSBEiJ_G0014843.1 mouse_genomes_project 2 58511011 58514699 - 5330411J11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0054842.1 MGP_WSBEiJ_G0025328.1 mouse_genomes_project 2 89809089 89810025 + MGP_WSBEiJ_P0054842 Olfr1212 protein_coding protein_coding MGP_WSBEiJ_T0010246.1 MGP_WSBEiJ_G0008403.1 mouse_genomes_project 2 37341900 37341976 + Mir181a-2 miRNA miRNA MGP_WSBEiJ_T0058092.1 MGP_WSBEiJ_G0026106.1 mouse_genomes_project 2 168716466 168721157 - MGP_WSBEiJ_P0058092 Spint3 protein_coding protein_coding MGP_WSBEiJ_T0058233.1 MGP_WSBEiJ_G0026143.1 mouse_genomes_project 2 169635384 169707475 - MGP_WSBEiJ_P0058233 Slc13a3 protein_coding protein_coding MGP_WSBEiJ_T0058234.1 MGP_WSBEiJ_G0026143.1 mouse_genomes_project 2 169635649 169707475 - MGP_WSBEiJ_P0058234 Slc13a3 protein_coding protein_coding MGP_WSBEiJ_T0058235.1 MGP_WSBEiJ_G0026143.1 mouse_genomes_project 2 169637061 169639417 - Slc13a3 protein_coding retained_intron MGP_WSBEiJ_T0058236.1 MGP_WSBEiJ_G0026143.1 mouse_genomes_project 2 169642234 169650651 - Slc13a3 protein_coding retained_intron MGP_WSBEiJ_T0058237.1 MGP_WSBEiJ_G0026143.1 mouse_genomes_project 2 169677478 169707444 - Slc13a3 protein_coding retained_intron MGP_WSBEiJ_T0098125.1 MGP_WSBEiJ_G0036788.1 mouse_genomes_project 2 135442341 135442444 + Gm22245 snRNA snRNA MGP_WSBEiJ_T0053611.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43247862 43443307 - MGP_WSBEiJ_P0053611 Gtdc1 protein_coding protein_coding MGP_WSBEiJ_T0053612.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43247864 43559805 - MGP_WSBEiJ_P0053612 Gtdc1 protein_coding protein_coding MGP_WSBEiJ_T0053613.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43248580 43255433 - Gtdc1 protein_coding processed_transcript MGP_WSBEiJ_T0053614.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43254455 43255800 - Gtdc1 protein_coding processed_transcript MGP_WSBEiJ_T0053615.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43259565 43621682 - MGP_WSBEiJ_P0053615 Gtdc1 protein_coding protein_coding MGP_WSBEiJ_T0053616.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43317202 43621785 - Gtdc1 protein_coding processed_transcript MGP_WSBEiJ_T0053617.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43319327 43622178 - MGP_WSBEiJ_P0053617 Gtdc1 protein_coding protein_coding MGP_WSBEiJ_T0053618.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43438763 43513178 - Gtdc1 protein_coding processed_transcript MGP_WSBEiJ_T0053619.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43473894 43621757 - MGP_WSBEiJ_P0053619 Gtdc1 protein_coding protein_coding MGP_WSBEiJ_T0053620.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43477151 43621755 - Gtdc1 protein_coding processed_transcript MGP_WSBEiJ_T0053621.1 MGP_WSBEiJ_G0024981.1 mouse_genomes_project 2 43479616 43621670 - Gtdc1 protein_coding processed_transcript MGP_WSBEiJ_T0056664.1 MGP_WSBEiJ_G0025768.1 mouse_genomes_project 2 133303394 133320798 + MGP_WSBEiJ_P0056664 Itpa protein_coding protein_coding MGP_WSBEiJ_T0056665.1 MGP_WSBEiJ_G0025768.1 mouse_genomes_project 2 133303589 133315199 + Itpa protein_coding retained_intron MGP_WSBEiJ_T0056666.1 MGP_WSBEiJ_G0025768.1 mouse_genomes_project 2 133303592 133314906 + Itpa protein_coding processed_transcript MGP_WSBEiJ_T0056667.1 MGP_WSBEiJ_G0025768.1 mouse_genomes_project 2 133303610 133308993 + Itpa protein_coding retained_intron MGP_WSBEiJ_T0056668.1 MGP_WSBEiJ_G0025768.1 mouse_genomes_project 2 133303649 133320216 + Itpa protein_coding processed_transcript MGP_WSBEiJ_T0007092.1 MGP_WSBEiJ_G0005818.1 mouse_genomes_project 2 49443491 49447837 + Gm13485 lincRNA lincRNA MGP_WSBEiJ_T0003929.1 MGP_WSBEiJ_G0003501.1 mouse_genomes_project 2 72820936 72822307 + antisense antisense MGP_WSBEiJ_T0013303.1 MGP_WSBEiJ_G0011433.1 mouse_genomes_project 2 92093968 92094136 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007132.1 MGP_WSBEiJ_G0005851.1 mouse_genomes_project 2 74643303 74644364 + Gm14424 lincRNA lincRNA MGP_WSBEiJ_T0007082.1 MGP_WSBEiJ_G0005809.1 mouse_genomes_project 2 36881913 36919376 + Gm13589 lincRNA lincRNA MGP_WSBEiJ_T0007240.1 MGP_WSBEiJ_G0005939.1 mouse_genomes_project 2 150588507 150590030 - Gm14110 lincRNA lincRNA MGP_WSBEiJ_T0056230.1 MGP_WSBEiJ_G0025655.1 mouse_genomes_project 2 124227257 124260120 + MGP_WSBEiJ_P0056230 Eif3j1 protein_coding protein_coding MGP_WSBEiJ_T0056232.1 MGP_WSBEiJ_G0025655.1 mouse_genomes_project 2 124227363 124228046 + Eif3j1 protein_coding processed_transcript MGP_WSBEiJ_T0007317.1 MGP_WSBEiJ_G0006004.1 mouse_genomes_project 2 178276925 178278080 + Gm14642 lincRNA lincRNA MGP_WSBEiJ_T0054388.1 MGP_WSBEiJ_G0025126.1 mouse_genomes_project 2 76330757 76338046 - MGP_WSBEiJ_P0054388 Cyct protein_coding protein_coding MGP_WSBEiJ_T0007214.1 MGP_WSBEiJ_G0005917.1 mouse_genomes_project 2 128956766 128988428 - Gm26697 lincRNA lincRNA MGP_WSBEiJ_T0010199.1 MGP_WSBEiJ_G0008356.1 mouse_genomes_project 2 7828252 7828350 + Mir669m-2 miRNA miRNA MGP_WSBEiJ_T0053817.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58268026 58481834 + MGP_WSBEiJ_P0053817 Pkp4 protein_coding protein_coding MGP_WSBEiJ_T0053818.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58268026 58481835 + MGP_WSBEiJ_P0053818 Pkp4 protein_coding protein_coding MGP_WSBEiJ_T0053819.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58268156 58464023 + MGP_WSBEiJ_P0053819 Pkp4 protein_coding protein_coding MGP_WSBEiJ_T0053820.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58268156 58481454 + MGP_WSBEiJ_P0053820 Pkp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053821.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58268184 58481838 + MGP_WSBEiJ_P0053821 Pkp4 protein_coding protein_coding MGP_WSBEiJ_T0053822.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58268196 58430521 + Pkp4 protein_coding processed_transcript MGP_WSBEiJ_T0053823.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58268219 58464026 + MGP_WSBEiJ_P0053823 Pkp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053824.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58269103 58333761 + Pkp4 protein_coding processed_transcript MGP_WSBEiJ_T0053825.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58269103 58430753 + MGP_WSBEiJ_P0053825 Pkp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053826.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58319513 58333776 + Pkp4 protein_coding processed_transcript MGP_WSBEiJ_T0053827.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58348494 58481835 + MGP_WSBEiJ_P0053827 Pkp4 protein_coding protein_coding MGP_WSBEiJ_T0053828.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58382411 58481837 + MGP_WSBEiJ_P0053828 Pkp4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0053829.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58383960 58481837 + MGP_WSBEiJ_P0053829 Pkp4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0053830.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58389991 58433623 + Pkp4 protein_coding processed_transcript MGP_WSBEiJ_T0053831.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58447969 58481835 + Pkp4 protein_coding processed_transcript MGP_WSBEiJ_T0053832.1 MGP_WSBEiJ_G0025018.1 mouse_genomes_project 2 58467349 58473359 + Pkp4 protein_coding processed_transcript MGP_WSBEiJ_T0010174.1 MGP_WSBEiJ_G0008331.1 mouse_genomes_project 2 7777497 7777618 + Mir669d miRNA miRNA MGP_WSBEiJ_T0056540.1 MGP_WSBEiJ_G0025736.1 mouse_genomes_project 2 131635376 131666096 + MGP_WSBEiJ_P0056540 Ttl protein_coding protein_coding MGP_WSBEiJ_T0056541.1 MGP_WSBEiJ_G0025736.1 mouse_genomes_project 2 131635419 131637540 + Ttl protein_coding processed_transcript MGP_WSBEiJ_T0056542.1 MGP_WSBEiJ_G0025736.1 mouse_genomes_project 2 131645492 131659523 + MGP_WSBEiJ_P0056542 Ttl protein_coding protein_coding MGP_WSBEiJ_T0052221.1 MGP_WSBEiJ_G0024734.1 mouse_genomes_project 2 23516129 23519217 + MGP_WSBEiJ_P0052221 Obp2b protein_coding protein_coding MGP_WSBEiJ_T0013062.1 MGP_WSBEiJ_G0011192.1 mouse_genomes_project 2 1039756 1041053 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053476.1 MGP_WSBEiJ_G0024957.1 mouse_genomes_project 2 35802482 35857265 - MGP_WSBEiJ_P0053476 Rc3h2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053477.1 MGP_WSBEiJ_G0024957.1 mouse_genomes_project 2 35806179 35857425 - MGP_WSBEiJ_P0053477 Rc3h2 protein_coding protein_coding MGP_WSBEiJ_T0053478.1 MGP_WSBEiJ_G0024957.1 mouse_genomes_project 2 35807804 35808516 - Rc3h2 protein_coding retained_intron MGP_WSBEiJ_T0053479.1 MGP_WSBEiJ_G0024957.1 mouse_genomes_project 2 35808738 35812193 - Rc3h2 protein_coding retained_intron MGP_WSBEiJ_T0053480.1 MGP_WSBEiJ_G0024957.1 mouse_genomes_project 2 35823251 35825491 - Rc3h2 protein_coding retained_intron MGP_WSBEiJ_T0053481.1 MGP_WSBEiJ_G0024957.1 mouse_genomes_project 2 35831444 35834093 - Rc3h2 protein_coding retained_intron MGP_WSBEiJ_T0053482.1 MGP_WSBEiJ_G0024957.1 mouse_genomes_project 2 35844195 35849363 - Rc3h2 protein_coding processed_transcript MGP_WSBEiJ_T0053483.1 MGP_WSBEiJ_G0024957.1 mouse_genomes_project 2 35848159 35851638 - Rc3h2 protein_coding retained_intron MGP_WSBEiJ_T0054810.1 MGP_WSBEiJ_G0025298.1 mouse_genomes_project 2 88685333 88686480 - MGP_WSBEiJ_P0054810 protein_coding protein_coding MGP_WSBEiJ_T0007054.1 MGP_WSBEiJ_G0005789.1 mouse_genomes_project 2 23970590 23974290 - C330006A16Rik lincRNA lincRNA MGP_WSBEiJ_T0007055.1 MGP_WSBEiJ_G0005789.1 mouse_genomes_project 2 23972150 23972570 - C330006A16Rik lincRNA lincRNA MGP_WSBEiJ_T0058065.1 MGP_WSBEiJ_G0026099.1 mouse_genomes_project 2 168553353 168574255 - MGP_WSBEiJ_P0058065 Sdc4 protein_coding protein_coding MGP_WSBEiJ_T0058066.1 MGP_WSBEiJ_G0026099.1 mouse_genomes_project 2 168555504 168574956 - Sdc4 protein_coding processed_transcript MGP_WSBEiJ_T0096809.1 MGP_WSBEiJ_G0035490.1 mouse_genomes_project 2 12077894 12078516 - pseudogene pseudogene MGP_WSBEiJ_T0017269.1 MGP_WSBEiJ_G0014886.1 mouse_genomes_project 2 127525962 127536939 - Gm14004 processed_transcript processed_transcript MGP_WSBEiJ_T0004087.1 MGP_WSBEiJ_G0003614.1 mouse_genomes_project 2 171280181 171281025 + Gm17096 antisense antisense MGP_WSBEiJ_T0013442.1 MGP_WSBEiJ_G0011572.1 mouse_genomes_project 2 151738192 151738427 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055463.1 MGP_WSBEiJ_G0025471.1 mouse_genomes_project 2 106040712 106065800 - Tcp11l1 protein_coding processed_transcript MGP_WSBEiJ_T0055466.1 MGP_WSBEiJ_G0025471.1 mouse_genomes_project 2 106059532 106092592 - MGP_WSBEiJ_P0055466 Tcp11l1 protein_coding protein_coding MGP_WSBEiJ_T0055467.1 MGP_WSBEiJ_G0025471.1 mouse_genomes_project 2 106061494 106092598 - MGP_WSBEiJ_P0055467 Tcp11l1 protein_coding protein_coding MGP_WSBEiJ_T0055468.1 MGP_WSBEiJ_G0025471.1 mouse_genomes_project 2 106066315 106092605 - Tcp11l1 protein_coding retained_intron MGP_WSBEiJ_T0055469.1 MGP_WSBEiJ_G0025471.1 mouse_genomes_project 2 106077147 106086748 - Tcp11l1 protein_coding processed_transcript MGP_WSBEiJ_T0055470.1 MGP_WSBEiJ_G0025471.1 mouse_genomes_project 2 106078691 106092529 - Tcp11l1 protein_coding processed_transcript MGP_WSBEiJ_T0055471.1 MGP_WSBEiJ_G0025471.1 mouse_genomes_project 2 106085231 106092602 - Tcp11l1 protein_coding processed_transcript MGP_WSBEiJ_T0054741.1 MGP_WSBEiJ_G0025240.1 mouse_genomes_project 2 87228957 87230139 - MGP_WSBEiJ_P0054741 protein_coding protein_coding MGP_WSBEiJ_T0054808.1 MGP_WSBEiJ_G0025296.1 mouse_genomes_project 2 88645347 88646304 - MGP_WSBEiJ_P0054808 Olfr74 protein_coding protein_coding MGP_WSBEiJ_T0058452.1 MGP_WSBEiJ_G0026184.1 mouse_genomes_project 2 175142521 175158037 - MGP_WSBEiJ_P0058452 Cyp24a1 protein_coding protein_coding MGP_WSBEiJ_T0011289.1 MGP_WSBEiJ_G0009446.1 mouse_genomes_project 2 18201072 18201161 + Gm27446 misc_RNA misc_RNA MGP_WSBEiJ_T0013418.1 MGP_WSBEiJ_G0011548.1 mouse_genomes_project 2 146268445 146269065 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057078.1 MGP_WSBEiJ_G0025854.1 mouse_genomes_project 2 150137317 150138361 + MGP_WSBEiJ_P0057078 protein_coding protein_coding MGP_WSBEiJ_T0001014.1 MGP_WSBEiJ_G0000949.1 mouse_genomes_project 2 11469139 11471742 - TEC TEC MGP_WSBEiJ_T0054855.1 MGP_WSBEiJ_G0025338.1 mouse_genomes_project 2 89997944 89998880 - MGP_WSBEiJ_P0054855 Olfr1223 protein_coding protein_coding MGP_WSBEiJ_T0003915.1 MGP_WSBEiJ_G0003491.1 mouse_genomes_project 2 66811605 66900467 - Gm13599 antisense antisense MGP_WSBEiJ_T0054108.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69346269 69347514 + protein_coding processed_transcript MGP_WSBEiJ_T0054109.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69346529 69380892 + MGP_WSBEiJ_P0054109 protein_coding protein_coding MGP_WSBEiJ_T0054110.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69346578 69357068 + protein_coding processed_transcript MGP_WSBEiJ_T0054111.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69346627 69356103 + protein_coding processed_transcript MGP_WSBEiJ_T0054112.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69346817 69380892 + MGP_WSBEiJ_P0054112 protein_coding protein_coding MGP_WSBEiJ_T0054113.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69347050 69359884 + protein_coding processed_transcript MGP_WSBEiJ_T0054114.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69353037 69359587 + MGP_WSBEiJ_P0054114 protein_coding protein_coding MGP_WSBEiJ_T0054115.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69355522 69365346 + protein_coding processed_transcript MGP_WSBEiJ_T0054116.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69355770 69356821 + protein_coding processed_transcript MGP_WSBEiJ_T0054117.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69355939 69356838 + protein_coding processed_transcript MGP_WSBEiJ_T0054118.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69359452 69365432 + protein_coding processed_transcript MGP_WSBEiJ_T0054119.1 MGP_WSBEiJ_G0025067.1 mouse_genomes_project 2 69365487 69376425 + protein_coding processed_transcript MGP_WSBEiJ_T0013199.1 MGP_WSBEiJ_G0011329.1 mouse_genomes_project 2 55077185 55077418 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007029.1 MGP_WSBEiJ_G0005771.1 mouse_genomes_project 2 6591821 6649256 + Gm13219 lincRNA lincRNA MGP_WSBEiJ_T0007030.1 MGP_WSBEiJ_G0005771.1 mouse_genomes_project 2 6591880 6688618 + Gm13219 lincRNA lincRNA MGP_WSBEiJ_T0007031.1 MGP_WSBEiJ_G0005771.1 mouse_genomes_project 2 6591910 6650617 + Gm13219 lincRNA lincRNA MGP_WSBEiJ_T0054757.1 MGP_WSBEiJ_G0025255.1 mouse_genomes_project 2 87621631 87622564 - MGP_WSBEiJ_P0054757 Olfr1104 protein_coding protein_coding MGP_WSBEiJ_T0010203.1 MGP_WSBEiJ_G0008360.1 mouse_genomes_project 2 7829709 7829790 + Mir466h miRNA miRNA MGP_WSBEiJ_T0007194.1 MGP_WSBEiJ_G0005902.1 mouse_genomes_project 2 117914364 117915593 - 2700033N17Rik lincRNA lincRNA MGP_WSBEiJ_T0057121.1 MGP_WSBEiJ_G0025874.1 mouse_genomes_project 2 152195133 152198969 - MGP_WSBEiJ_P0057121 Cst3 protein_coding protein_coding MGP_WSBEiJ_T0057122.1 MGP_WSBEiJ_G0025874.1 mouse_genomes_project 2 152195879 152198844 - Cst3 protein_coding processed_transcript MGP_WSBEiJ_T0057123.1 MGP_WSBEiJ_G0025874.1 mouse_genomes_project 2 152196238 152199085 - MGP_WSBEiJ_P0057123 Cst3 protein_coding protein_coding MGP_WSBEiJ_T0017193.1 MGP_WSBEiJ_G0014846.1 mouse_genomes_project 2 69687523 69692257 + Gm13631 processed_transcript processed_transcript MGP_WSBEiJ_T0010194.1 MGP_WSBEiJ_G0008351.1 mouse_genomes_project 2 7824655 7824751 + Gm23542 miRNA miRNA MGP_WSBEiJ_T0017226.1 MGP_WSBEiJ_G0014868.1 mouse_genomes_project 2 94889992 94893532 + Alkbh3os1 processed_transcript processed_transcript MGP_WSBEiJ_T0052553.1 MGP_WSBEiJ_G0024796.1 mouse_genomes_project 2 26650546 26659434 - MGP_WSBEiJ_P0052553 Spaca9 protein_coding protein_coding MGP_WSBEiJ_T0052554.1 MGP_WSBEiJ_G0024796.1 mouse_genomes_project 2 26650550 26659466 - MGP_WSBEiJ_P0052554 Spaca9 protein_coding protein_coding MGP_WSBEiJ_T0052555.1 MGP_WSBEiJ_G0024796.1 mouse_genomes_project 2 26651478 26659510 - Spaca9 protein_coding processed_transcript MGP_WSBEiJ_T0052556.1 MGP_WSBEiJ_G0024796.1 mouse_genomes_project 2 26652171 26659457 - Spaca9 protein_coding processed_transcript MGP_WSBEiJ_T0001010.1 MGP_WSBEiJ_G0000945.1 mouse_genomes_project 2 10505108 10507368 - TEC TEC MGP_WSBEiJ_T0053456.1 MGP_WSBEiJ_G0024941.1 mouse_genomes_project 2 35302243 35305048 - MGP_WSBEiJ_P0053456 Olfr351 protein_coding protein_coding MGP_WSBEiJ_T0055899.1 MGP_WSBEiJ_G0025604.1 mouse_genomes_project 2 121842977 121864917 + MGP_WSBEiJ_P0055899 Tyro3 protein_coding protein_coding MGP_WSBEiJ_T0055900.1 MGP_WSBEiJ_G0025604.1 mouse_genomes_project 2 121844472 121852433 + Tyro3 protein_coding processed_transcript MGP_WSBEiJ_T0055901.1 MGP_WSBEiJ_G0025604.1 mouse_genomes_project 2 121844560 121850131 + Tyro3 protein_coding processed_transcript MGP_WSBEiJ_T0055902.1 MGP_WSBEiJ_G0025604.1 mouse_genomes_project 2 121844747 121864917 + MGP_WSBEiJ_P0055902 Tyro3 protein_coding protein_coding MGP_WSBEiJ_T0055903.1 MGP_WSBEiJ_G0025604.1 mouse_genomes_project 2 121847903 121850089 + Tyro3 protein_coding processed_transcript MGP_WSBEiJ_T0055904.1 MGP_WSBEiJ_G0025604.1 mouse_genomes_project 2 121849882 121854776 + Tyro3 protein_coding retained_intron MGP_WSBEiJ_T0055905.1 MGP_WSBEiJ_G0025604.1 mouse_genomes_project 2 121855992 121864904 + Tyro3 protein_coding retained_intron MGP_WSBEiJ_T0055906.1 MGP_WSBEiJ_G0025604.1 mouse_genomes_project 2 121857638 121859184 + Tyro3 protein_coding retained_intron MGP_WSBEiJ_T0057448.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472501 158549245 + MGP_WSBEiJ_P0057448 Raly protein_coding protein_coding MGP_WSBEiJ_T0057449.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472511 158545385 + MGP_WSBEiJ_P0057449 Raly protein_coding protein_coding MGP_WSBEiJ_T0057450.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472515 158549261 + MGP_WSBEiJ_P0057450 Raly protein_coding protein_coding MGP_WSBEiJ_T0057451.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472523 158543485 + MGP_WSBEiJ_P0057451 Raly protein_coding protein_coding MGP_WSBEiJ_T0057452.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472538 158549244 + MGP_WSBEiJ_P0057452 Raly protein_coding protein_coding MGP_WSBEiJ_T0057453.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472562 158549261 + MGP_WSBEiJ_P0057453 Raly protein_coding protein_coding MGP_WSBEiJ_T0057454.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472757 158545598 + MGP_WSBEiJ_P0057454 Raly protein_coding protein_coding MGP_WSBEiJ_T0057455.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472759 158530021 + Raly protein_coding processed_transcript MGP_WSBEiJ_T0057456.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158472774 158538887 + Raly protein_coding processed_transcript MGP_WSBEiJ_T0057458.1 MGP_WSBEiJ_G0025974.1 mouse_genomes_project 2 158473118 158539000 + Raly protein_coding processed_transcript MGP_WSBEiJ_T0051522.1 MGP_WSBEiJ_G0024611.1 mouse_genomes_project 2 8959986 8960645 - MGP_WSBEiJ_P0051522 Gm17490 protein_coding protein_coding MGP_WSBEiJ_T0058111.1 MGP_WSBEiJ_G0026119.1 mouse_genomes_project 2 168923996 168947470 + MGP_WSBEiJ_P0058111 Dnttip1 protein_coding protein_coding MGP_WSBEiJ_T0058112.1 MGP_WSBEiJ_G0026119.1 mouse_genomes_project 2 168924027 168929401 + MGP_WSBEiJ_P0058112 Dnttip1 protein_coding protein_coding MGP_WSBEiJ_T0058113.1 MGP_WSBEiJ_G0026119.1 mouse_genomes_project 2 168924044 168939564 + MGP_WSBEiJ_P0058113 Dnttip1 protein_coding protein_coding MGP_WSBEiJ_T0058114.1 MGP_WSBEiJ_G0026119.1 mouse_genomes_project 2 168932151 168937563 + Dnttip1 protein_coding retained_intron MGP_WSBEiJ_T0054170.1 MGP_WSBEiJ_G0025079.1 mouse_genomes_project 2 70348648 70402141 + MGP_WSBEiJ_P0054170 Gorasp2 protein_coding protein_coding MGP_WSBEiJ_T0054171.1 MGP_WSBEiJ_G0025079.1 mouse_genomes_project 2 70348648 70380726 + MGP_WSBEiJ_P0054171 Gorasp2 protein_coding protein_coding MGP_WSBEiJ_T0054172.1 MGP_WSBEiJ_G0025079.1 mouse_genomes_project 2 70348648 70380708 + MGP_WSBEiJ_P0054172 Gorasp2 protein_coding protein_coding MGP_WSBEiJ_T0054173.1 MGP_WSBEiJ_G0025079.1 mouse_genomes_project 2 70348662 70378343 + MGP_WSBEiJ_P0054173 Gorasp2 protein_coding protein_coding MGP_WSBEiJ_T0054174.1 MGP_WSBEiJ_G0025079.1 mouse_genomes_project 2 70349272 70366939 + Gorasp2 protein_coding processed_transcript MGP_WSBEiJ_T0054175.1 MGP_WSBEiJ_G0025079.1 mouse_genomes_project 2 70376796 70380704 + Gorasp2 protein_coding processed_transcript MGP_WSBEiJ_T0055425.1 MGP_WSBEiJ_G0025461.1 mouse_genomes_project 2 105276275 105300368 + MGP_WSBEiJ_P0055425 Lmo2 protein_coding protein_coding MGP_WSBEiJ_T0055426.1 MGP_WSBEiJ_G0025461.1 mouse_genomes_project 2 105276284 105301196 + MGP_WSBEiJ_P0055426 Lmo2 protein_coding protein_coding MGP_WSBEiJ_T0055428.1 MGP_WSBEiJ_G0025461.1 mouse_genomes_project 2 105288654 105300410 + MGP_WSBEiJ_P0055428 Lmo2 protein_coding protein_coding MGP_WSBEiJ_T0055429.1 MGP_WSBEiJ_G0025461.1 mouse_genomes_project 2 105289254 105301173 + MGP_WSBEiJ_P0055429 Lmo2 protein_coding protein_coding MGP_WSBEiJ_T0055430.1 MGP_WSBEiJ_G0025461.1 mouse_genomes_project 2 105289266 105295271 + MGP_WSBEiJ_P0055430 Lmo2 protein_coding protein_coding MGP_WSBEiJ_T0055431.1 MGP_WSBEiJ_G0025461.1 mouse_genomes_project 2 105289348 105301192 + MGP_WSBEiJ_P0055431 Lmo2 protein_coding protein_coding MGP_WSBEiJ_T0055432.1 MGP_WSBEiJ_G0025461.1 mouse_genomes_project 2 105289369 105301157 + MGP_WSBEiJ_P0055432 Lmo2 protein_coding protein_coding MGP_WSBEiJ_T0055433.1 MGP_WSBEiJ_G0025461.1 mouse_genomes_project 2 105290304 105300234 + Lmo2 protein_coding processed_transcript MGP_WSBEiJ_T0013158.1 MGP_WSBEiJ_G0011288.1 mouse_genomes_project 2 37775129 37775894 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056358.1 MGP_WSBEiJ_G0025691.1 mouse_genomes_project 2 128458887 128460330 + Fgf7 protein_coding processed_transcript MGP_WSBEiJ_T0056359.1 MGP_WSBEiJ_G0025691.1 mouse_genomes_project 2 128458887 128521866 + MGP_WSBEiJ_P0056359 Fgf7 protein_coding protein_coding MGP_WSBEiJ_T0056360.1 MGP_WSBEiJ_G0025691.1 mouse_genomes_project 2 128459202 128521202 + MGP_WSBEiJ_P0056360 Fgf7 protein_coding protein_coding MGP_WSBEiJ_T0098112.1 MGP_WSBEiJ_G0036775.1 mouse_genomes_project 2 86368588 86368768 - Gm24037 snRNA snRNA MGP_WSBEiJ_T0013068.1 MGP_WSBEiJ_G0011198.1 mouse_genomes_project 2 2208939 2209764 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013220.1 MGP_WSBEiJ_G0011350.1 mouse_genomes_project 2 61978995 61980583 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003991.1 MGP_WSBEiJ_G0003543.1 mouse_genomes_project 2 127612320 127622559 - Gm14002 antisense antisense MGP_WSBEiJ_T0051747.1 MGP_WSBEiJ_G0024647.1 mouse_genomes_project 2 16808897 16923435 + MGP_WSBEiJ_P0051747 Armc3 protein_coding protein_coding MGP_WSBEiJ_T0051748.1 MGP_WSBEiJ_G0024647.1 mouse_genomes_project 2 16808897 16923435 + MGP_WSBEiJ_P0051748 Armc3 protein_coding protein_coding MGP_WSBEiJ_T0055692.1 MGP_WSBEiJ_G0025554.1 mouse_genomes_project 2 115935080 115943034 - MGP_WSBEiJ_P0055692 Zfp770 protein_coding protein_coding MGP_WSBEiJ_T0055693.1 MGP_WSBEiJ_G0025554.1 mouse_genomes_project 2 115940124 115943005 - Zfp770 protein_coding processed_transcript MGP_WSBEiJ_T0007036.1 MGP_WSBEiJ_G0005776.1 mouse_genomes_project 2 8666346 8670976 + Gm13293 lincRNA lincRNA MGP_WSBEiJ_T0056962.1 MGP_WSBEiJ_G0025830.1 mouse_genomes_project 2 146976746 147018154 - MGP_WSBEiJ_P0056962 Bfsp1 protein_coding protein_coding MGP_WSBEiJ_T0056963.1 MGP_WSBEiJ_G0025830.1 mouse_genomes_project 2 146976746 147017924 - MGP_WSBEiJ_P0056963 Bfsp1 protein_coding protein_coding MGP_WSBEiJ_T0013113.1 MGP_WSBEiJ_G0011243.1 mouse_genomes_project 2 20549042 20549582 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051481.1 MGP_WSBEiJ_G0024606.1 mouse_genomes_project 2 7450837 7548267 + MGP_WSBEiJ_P0051481 Itih5 protein_coding protein_coding MGP_WSBEiJ_T0013436.1 MGP_WSBEiJ_G0011566.1 mouse_genomes_project 2 150542989 150543471 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001017.1 MGP_WSBEiJ_G0000952.1 mouse_genomes_project 2 12160691 12162100 + TEC TEC MGP_WSBEiJ_T0013485.1 MGP_WSBEiJ_G0011615.1 mouse_genomes_project 2 166843750 166844083 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054893.1 MGP_WSBEiJ_G0025366.1 mouse_genomes_project 2 90662419 90663325 - MGP_WSBEiJ_P0054893 Olfr48 protein_coding protein_coding MGP_WSBEiJ_T0056084.1 MGP_WSBEiJ_G0025631.1 mouse_genomes_project 2 123188283 123204241 - MGP_WSBEiJ_P0056084 Tgm7 protein_coding protein_coding MGP_WSBEiJ_T0054156.1 MGP_WSBEiJ_G0025076.1 mouse_genomes_project 2 70186647 70218897 + MGP_WSBEiJ_P0054156 Erich2 protein_coding protein_coding MGP_WSBEiJ_T0054157.1 MGP_WSBEiJ_G0025076.1 mouse_genomes_project 2 70186659 70218897 + MGP_WSBEiJ_P0054157 Erich2 protein_coding protein_coding MGP_WSBEiJ_T0054158.1 MGP_WSBEiJ_G0025076.1 mouse_genomes_project 2 70187288 70215260 + Erich2 protein_coding retained_intron MGP_WSBEiJ_T0054159.1 MGP_WSBEiJ_G0025076.1 mouse_genomes_project 2 70187288 70201224 + Erich2 protein_coding retained_intron MGP_WSBEiJ_T0054160.1 MGP_WSBEiJ_G0025076.1 mouse_genomes_project 2 70187325 70205480 + MGP_WSBEiJ_P0054160 Erich2 protein_coding protein_coding MGP_WSBEiJ_T0013100.1 MGP_WSBEiJ_G0011230.1 mouse_genomes_project 2 15925063 15925474 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003832.1 MGP_WSBEiJ_G0003427.1 mouse_genomes_project 2 17062942 17068079 - Ptf1aos antisense antisense MGP_WSBEiJ_T0013171.1 MGP_WSBEiJ_G0011301.1 mouse_genomes_project 2 44387076 44387489 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054919.1 MGP_WSBEiJ_G0025382.1 mouse_genomes_project 2 91095177 91095869 - Ptprj protein_coding processed_transcript MGP_WSBEiJ_T0054920.1 MGP_WSBEiJ_G0025382.1 mouse_genomes_project 2 91095179 91147185 - MGP_WSBEiJ_P0054920 Ptprj protein_coding protein_coding MGP_WSBEiJ_T0054921.1 MGP_WSBEiJ_G0025382.1 mouse_genomes_project 2 91098274 91147134 - MGP_WSBEiJ_P0054921 Ptprj protein_coding protein_coding MGP_WSBEiJ_T0054922.1 MGP_WSBEiJ_G0025382.1 mouse_genomes_project 2 91098282 91253643 - MGP_WSBEiJ_P0054922 Ptprj protein_coding protein_coding MGP_WSBEiJ_T0053471.1 MGP_WSBEiJ_G0024955.1 mouse_genomes_project 2 35764375 35765359 + MGP_WSBEiJ_P0053471 Olfr368 protein_coding protein_coding MGP_WSBEiJ_T0001056.1 MGP_WSBEiJ_G0000991.1 mouse_genomes_project 2 75280685 75281279 - TEC TEC MGP_WSBEiJ_T0052744.1 MGP_WSBEiJ_G0024824.1 mouse_genomes_project 2 28291231 28317283 + MGP_WSBEiJ_P0052744 Gm28035 protein_coding protein_coding MGP_WSBEiJ_T0052745.1 MGP_WSBEiJ_G0024824.1 mouse_genomes_project 2 28291238 28317288 + MGP_WSBEiJ_P0052745 Gm28035 protein_coding protein_coding MGP_WSBEiJ_T0057912.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164705820 164737011 + MGP_WSBEiJ_P0057912 Plcg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057913.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164705830 164750249 + MGP_WSBEiJ_P0057913 Plcg1 protein_coding protein_coding MGP_WSBEiJ_T0057914.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164706219 164722397 + MGP_WSBEiJ_P0057914 Plcg1 protein_coding protein_coding MGP_WSBEiJ_T0057915.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164706253 164737795 + MGP_WSBEiJ_P0057915 Plcg1 protein_coding protein_coding MGP_WSBEiJ_T0057916.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164715495 164737015 + Plcg1 protein_coding processed_transcript MGP_WSBEiJ_T0057918.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164726995 164736664 + Plcg1 protein_coding retained_intron MGP_WSBEiJ_T0057919.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164727060 164733416 + Plcg1 protein_coding retained_intron MGP_WSBEiJ_T0057920.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164728575 164729373 + Plcg1 protein_coding retained_intron MGP_WSBEiJ_T0057921.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164729055 164729678 + Plcg1 protein_coding retained_intron MGP_WSBEiJ_T0057922.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164729080 164733956 + Plcg1 protein_coding processed_transcript MGP_WSBEiJ_T0057923.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164729414 164731656 + Plcg1 protein_coding retained_intron MGP_WSBEiJ_T0057924.1 MGP_WSBEiJ_G0026055.1 mouse_genomes_project 2 164734626 164736726 + MGP_WSBEiJ_P0057924 Plcg1 protein_coding protein_coding MGP_WSBEiJ_T0003954.1 MGP_WSBEiJ_G0003519.1 mouse_genomes_project 2 94284135 94299573 + Gm13807 antisense antisense MGP_WSBEiJ_T0007204.1 MGP_WSBEiJ_G0005909.1 mouse_genomes_project 2 120073550 120074147 - Gm29233 lincRNA lincRNA MGP_WSBEiJ_T0013109.1 MGP_WSBEiJ_G0011239.1 mouse_genomes_project 2 18916769 18917105 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013112.1 MGP_WSBEiJ_G0011242.1 mouse_genomes_project 2 20392395 20392730 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051283.1 MGP_WSBEiJ_G0024573.1 mouse_genomes_project 2 377555 391161 - MGP_WSBEiJ_P0051283 Meig1 protein_coding protein_coding MGP_WSBEiJ_T0051284.1 MGP_WSBEiJ_G0024573.1 mouse_genomes_project 2 377555 387530 - MGP_WSBEiJ_P0051284 Meig1 protein_coding protein_coding MGP_WSBEiJ_T0051285.1 MGP_WSBEiJ_G0024573.1 mouse_genomes_project 2 377558 387552 - MGP_WSBEiJ_P0051285 Meig1 protein_coding protein_coding MGP_WSBEiJ_T0051286.1 MGP_WSBEiJ_G0024573.1 mouse_genomes_project 2 377559 387640 - MGP_WSBEiJ_P0051286 Meig1 protein_coding protein_coding MGP_WSBEiJ_T0051287.1 MGP_WSBEiJ_G0024573.1 mouse_genomes_project 2 377622 387092 - MGP_WSBEiJ_P0051287 Meig1 protein_coding protein_coding MGP_WSBEiJ_T0051288.1 MGP_WSBEiJ_G0024573.1 mouse_genomes_project 2 377779 391107 - MGP_WSBEiJ_P0051288 Meig1 protein_coding protein_coding MGP_WSBEiJ_T0099331.1 MGP_WSBEiJ_G0037994.1 mouse_genomes_project 2 19450298 19450421 - Gm24886 snoRNA snoRNA MGP_WSBEiJ_T0054092.1 MGP_WSBEiJ_G0025062.1 mouse_genomes_project 2 68978242 69006468 + MGP_WSBEiJ_P0054092 Dhrs9 protein_coding protein_coding MGP_WSBEiJ_T0052746.1 MGP_WSBEiJ_G0024825.1 mouse_genomes_project 2 28294084 28337838 + MGP_WSBEiJ_P0052746 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055498.1 MGP_WSBEiJ_G0025481.1 mouse_genomes_project 2 106806067 106819096 - MGP_WSBEiJ_P0055498 Rcn1 protein_coding protein_coding MGP_WSBEiJ_T0055499.1 MGP_WSBEiJ_G0025481.1 mouse_genomes_project 2 106806705 106815125 - Rcn1 protein_coding retained_intron MGP_WSBEiJ_T0052392.1 MGP_WSBEiJ_G0024764.1 mouse_genomes_project 2 24772080 24777496 - MGP_WSBEiJ_P0052392 Med22 protein_coding protein_coding MGP_WSBEiJ_T0052393.1 MGP_WSBEiJ_G0024764.1 mouse_genomes_project 2 24772406 24777388 - MGP_WSBEiJ_P0052393 Med22 protein_coding protein_coding MGP_WSBEiJ_T0052394.1 MGP_WSBEiJ_G0024764.1 mouse_genomes_project 2 24774927 24777397 - MGP_WSBEiJ_P0052394 Med22 protein_coding protein_coding MGP_WSBEiJ_T0054538.1 MGP_WSBEiJ_G0025152.1 mouse_genomes_project 2 82421568 82650684 + MGP_WSBEiJ_P0054538 Zfp804a protein_coding protein_coding MGP_WSBEiJ_T0054539.1 MGP_WSBEiJ_G0025152.1 mouse_genomes_project 2 82622699 82648133 + Zfp804a protein_coding processed_transcript MGP_WSBEiJ_T0013376.1 MGP_WSBEiJ_G0011506.1 mouse_genomes_project 2 123502033 123502280 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058637.1 MGP_WSBEiJ_G0026240.1 mouse_genomes_project 2 185475264 185484828 - MGP_WSBEiJ_P0058637 Gata5 protein_coding protein_coding MGP_WSBEiJ_T0017185.1 MGP_WSBEiJ_G0014840.1 mouse_genomes_project 2 56247287 56299238 - BB557941 processed_transcript processed_transcript MGP_WSBEiJ_T0054838.1 MGP_WSBEiJ_G0025324.1 mouse_genomes_project 2 89669281 89671924 + MGP_WSBEiJ_P0054838 Olfr1206 protein_coding protein_coding MGP_WSBEiJ_T0056179.1 MGP_WSBEiJ_G0025644.1 mouse_genomes_project 2 123541374 123569177 - MGP_WSBEiJ_P0056179 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056185.1 MGP_WSBEiJ_G0025644.1 mouse_genomes_project 2 123563255 123570128 - MGP_WSBEiJ_P0056185 protein_coding protein_coding MGP_WSBEiJ_T0056186.1 MGP_WSBEiJ_G0025644.1 mouse_genomes_project 2 123563255 123570040 - MGP_WSBEiJ_P0056186 protein_coding protein_coding MGP_WSBEiJ_T0056187.1 MGP_WSBEiJ_G0025644.1 mouse_genomes_project 2 123563267 123569177 - MGP_WSBEiJ_P0056187 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056188.1 MGP_WSBEiJ_G0025644.1 mouse_genomes_project 2 123563325 123569171 - MGP_WSBEiJ_P0056188 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056189.1 MGP_WSBEiJ_G0025644.1 mouse_genomes_project 2 123565165 123566716 - protein_coding retained_intron MGP_WSBEiJ_T0051866.1 MGP_WSBEiJ_G0024669.1 mouse_genomes_project 2 21731012 21759000 - MGP_WSBEiJ_P0051866 Tbpl2 protein_coding protein_coding MGP_WSBEiJ_T0051867.1 MGP_WSBEiJ_G0024669.1 mouse_genomes_project 2 21731206 21758937 - MGP_WSBEiJ_P0051867 Tbpl2 protein_coding protein_coding MGP_WSBEiJ_T0055584.1 MGP_WSBEiJ_G0025498.1 mouse_genomes_project 2 112177513 112238190 + MGP_WSBEiJ_P0055584 Slc5a12 protein_coding protein_coding MGP_WSBEiJ_T0055585.1 MGP_WSBEiJ_G0025498.1 mouse_genomes_project 2 112177625 112214820 + Slc5a12 protein_coding retained_intron MGP_WSBEiJ_T0055586.1 MGP_WSBEiJ_G0025498.1 mouse_genomes_project 2 112177808 112236827 + MGP_WSBEiJ_P0055586 Slc5a12 protein_coding protein_coding MGP_WSBEiJ_T0055587.1 MGP_WSBEiJ_G0025498.1 mouse_genomes_project 2 112177930 112188821 + Slc5a12 protein_coding processed_transcript MGP_WSBEiJ_T0055588.1 MGP_WSBEiJ_G0025498.1 mouse_genomes_project 2 112188755 112236995 + Slc5a12 protein_coding processed_transcript MGP_WSBEiJ_T0053690.1 MGP_WSBEiJ_G0024989.1 mouse_genomes_project 2 48927527 49061648 + MGP_WSBEiJ_P0053690 Lypd6 protein_coding protein_coding MGP_WSBEiJ_T0053691.1 MGP_WSBEiJ_G0024989.1 mouse_genomes_project 2 49035773 49064551 + MGP_WSBEiJ_P0053691 Lypd6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0053692.1 MGP_WSBEiJ_G0024989.1 mouse_genomes_project 2 49036647 49044372 + MGP_WSBEiJ_P0053692 Lypd6 protein_coding protein_coding MGP_WSBEiJ_T0011312.1 MGP_WSBEiJ_G0009469.1 mouse_genomes_project 2 128691944 128692236 - Gm24739 misc_RNA misc_RNA MGP_WSBEiJ_T0013312.1 MGP_WSBEiJ_G0011442.1 mouse_genomes_project 2 95303939 95304536 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053524.1 MGP_WSBEiJ_G0024965.1 mouse_genomes_project 2 36791954 36808737 + Lhx2 protein_coding retained_intron MGP_WSBEiJ_T0053525.1 MGP_WSBEiJ_G0024965.1 mouse_genomes_project 2 36793562 36809869 + MGP_WSBEiJ_P0053525 Lhx2 protein_coding protein_coding MGP_WSBEiJ_T0053526.1 MGP_WSBEiJ_G0024965.1 mouse_genomes_project 2 36806811 36809675 + MGP_WSBEiJ_P0053526 Lhx2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053527.1 MGP_WSBEiJ_G0024965.1 mouse_genomes_project 2 36806817 36826432 + MGP_WSBEiJ_P0053527 Lhx2 protein_coding protein_coding MGP_WSBEiJ_T0053528.1 MGP_WSBEiJ_G0024965.1 mouse_genomes_project 2 36807575 36809617 + MGP_WSBEiJ_P0053528 Lhx2 protein_coding protein_coding MGP_WSBEiJ_T0053529.1 MGP_WSBEiJ_G0024965.1 mouse_genomes_project 2 36808845 36815120 + Lhx2 protein_coding retained_intron MGP_WSBEiJ_T0013450.1 MGP_WSBEiJ_G0011580.1 mouse_genomes_project 2 155141817 155142269 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056973.1 MGP_WSBEiJ_G0025833.1 mouse_genomes_project 2 147198835 147247083 + MGP_WSBEiJ_P0056973 Banf2 protein_coding protein_coding MGP_WSBEiJ_T0056974.1 MGP_WSBEiJ_G0025833.1 mouse_genomes_project 2 147198878 147247083 + MGP_WSBEiJ_P0056974 Banf2 protein_coding protein_coding MGP_WSBEiJ_T0003972.1 MGP_WSBEiJ_G0003528.1 mouse_genomes_project 2 115123097 115183456 - Gm13963 antisense antisense MGP_WSBEiJ_T0055958.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122389551 122427010 - MGP_WSBEiJ_P0055958 Vps39 protein_coding protein_coding MGP_WSBEiJ_T0055959.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122389551 122426998 - MGP_WSBEiJ_P0055959 Vps39 protein_coding protein_coding MGP_WSBEiJ_T0055960.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122389926 122426994 - Vps39 protein_coding processed_transcript MGP_WSBEiJ_T0055961.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122391143 122392693 - Vps39 protein_coding retained_intron MGP_WSBEiJ_T0055962.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122392956 122396636 - Vps39 protein_coding retained_intron MGP_WSBEiJ_T0055963.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122394989 122426982 - Vps39 protein_coding retained_intron MGP_WSBEiJ_T0055964.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122399002 122406512 - Vps39 protein_coding retained_intron MGP_WSBEiJ_T0055965.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122412317 122418039 - Vps39 protein_coding processed_transcript MGP_WSBEiJ_T0055966.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122417084 122426994 - Vps39 protein_coding processed_transcript MGP_WSBEiJ_T0055967.1 MGP_WSBEiJ_G0025615.1 mouse_genomes_project 2 122422297 122426998 - Vps39 protein_coding processed_transcript MGP_WSBEiJ_T0007277.1 MGP_WSBEiJ_G0005971.1 mouse_genomes_project 2 170252740 170265865 - Gm11464 lincRNA lincRNA MGP_WSBEiJ_T0013482.1 MGP_WSBEiJ_G0011612.1 mouse_genomes_project 2 164817007 164817865 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058046.1 MGP_WSBEiJ_G0026090.1 mouse_genomes_project 2 168347975 168350513 - MGP_WSBEiJ_P0058046 Svs2 protein_coding protein_coding MGP_WSBEiJ_T0058047.1 MGP_WSBEiJ_G0026090.1 mouse_genomes_project 2 168348574 168350311 - MGP_WSBEiJ_P0058047 Svs2 protein_coding protein_coding MGP_WSBEiJ_T0053499.1 MGP_WSBEiJ_G0024962.1 mouse_genomes_project 2 35954091 35954931 + Gpr21 protein_coding processed_transcript MGP_WSBEiJ_T0053501.1 MGP_WSBEiJ_G0024962.1 mouse_genomes_project 2 35954385 35958363 + MGP_WSBEiJ_P0053501 Gpr21 protein_coding protein_coding MGP_WSBEiJ_T0098114.1 MGP_WSBEiJ_G0036777.1 mouse_genomes_project 2 104165219 104165326 + Gm23731 snRNA snRNA MGP_WSBEiJ_T0013453.1 MGP_WSBEiJ_G0011583.1 mouse_genomes_project 2 155959826 155960309 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051743.1 MGP_WSBEiJ_G0024645.1 mouse_genomes_project 2 16443736 16598659 - MGP_WSBEiJ_P0051743 Pip4k2a protein_coding protein_coding MGP_WSBEiJ_T0051744.1 MGP_WSBEiJ_G0024645.1 mouse_genomes_project 2 16445853 16467580 - MGP_WSBEiJ_P0051744 Pip4k2a protein_coding protein_coding MGP_WSBEiJ_T0051745.1 MGP_WSBEiJ_G0024645.1 mouse_genomes_project 2 16448979 16505613 - MGP_WSBEiJ_P0051745 Pip4k2a protein_coding protein_coding MGP_WSBEiJ_T0057355.1 MGP_WSBEiJ_G0025944.1 mouse_genomes_project 2 157178639 157197426 - MGP_WSBEiJ_P0057355 Commd7 protein_coding protein_coding MGP_WSBEiJ_T0057356.1 MGP_WSBEiJ_G0025944.1 mouse_genomes_project 2 157180436 157197376 - Commd7 protein_coding retained_intron MGP_WSBEiJ_T0057357.1 MGP_WSBEiJ_G0025944.1 mouse_genomes_project 2 157180436 157197385 - MGP_WSBEiJ_P0057357 Commd7 protein_coding protein_coding MGP_WSBEiJ_T0004029.1 MGP_WSBEiJ_G0003568.1 mouse_genomes_project 2 146901896 146937750 - Pcsk2os2 antisense antisense MGP_WSBEiJ_T0004030.1 MGP_WSBEiJ_G0003568.1 mouse_genomes_project 2 146903477 146946192 - Pcsk2os2 antisense antisense MGP_WSBEiJ_T0007283.1 MGP_WSBEiJ_G0005976.1 mouse_genomes_project 2 170819415 170822945 - Gm14267 lincRNA lincRNA MGP_WSBEiJ_T0055204.1 MGP_WSBEiJ_G0025420.1 mouse_genomes_project 2 93208185 93217226 - MGP_WSBEiJ_P0055204 Mapk8ip1 protein_coding protein_coding MGP_WSBEiJ_T0055205.1 MGP_WSBEiJ_G0025420.1 mouse_genomes_project 2 93208189 93228644 - MGP_WSBEiJ_P0055205 Mapk8ip1 protein_coding protein_coding MGP_WSBEiJ_T0055206.1 MGP_WSBEiJ_G0025420.1 mouse_genomes_project 2 93214396 93217227 - Mapk8ip1 protein_coding processed_transcript MGP_WSBEiJ_T0098115.1 MGP_WSBEiJ_G0036778.1 mouse_genomes_project 2 111816418 111816525 + Gm22997 snRNA snRNA MGP_WSBEiJ_T0097024.1 MGP_WSBEiJ_G0035705.1 mouse_genomes_project 2 81871363 81871471 - Gm23900 rRNA rRNA MGP_WSBEiJ_T0007269.1 MGP_WSBEiJ_G0005963.1 mouse_genomes_project 2 165334554 165335494 + Gm14241 lincRNA lincRNA MGP_WSBEiJ_T0054908.1 MGP_WSBEiJ_G0025373.1 mouse_genomes_project 2 90823355 90824282 - MGP_WSBEiJ_P0054908 Olfr1264 protein_coding protein_coding MGP_WSBEiJ_T0097311.1 MGP_WSBEiJ_G0035986.1 mouse_genomes_project 2 1174375 1176965 + Gm37107 sense_intronic sense_intronic MGP_WSBEiJ_T0056513.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131152475 131230805 - MGP_WSBEiJ_P0056513 Anapc1 protein_coding protein_coding MGP_WSBEiJ_T0056514.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131157774 131160529 - Anapc1 protein_coding processed_transcript MGP_WSBEiJ_T0056515.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131159959 131165234 - Anapc1 protein_coding processed_transcript MGP_WSBEiJ_T0056516.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131164763 131169850 - Anapc1 protein_coding processed_transcript MGP_WSBEiJ_T0056517.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131166128 131171028 - Anapc1 protein_coding processed_transcript MGP_WSBEiJ_T0056518.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131170931 131172424 - Anapc1 protein_coding processed_transcript MGP_WSBEiJ_T0056519.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131184408 131230790 - MGP_WSBEiJ_P0056519 Anapc1 protein_coding protein_coding MGP_WSBEiJ_T0056520.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131199840 131205291 - Anapc1 protein_coding processed_transcript MGP_WSBEiJ_T0056521.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131201716 131206135 - Anapc1 protein_coding processed_transcript MGP_WSBEiJ_T0056522.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131219139 131230789 - Anapc1 protein_coding processed_transcript MGP_WSBEiJ_T0056523.1 MGP_WSBEiJ_G0025728.1 mouse_genomes_project 2 131228461 131230768 - MGP_WSBEiJ_P0056523 Anapc1 protein_coding protein_coding MGP_WSBEiJ_T0057272.1 MGP_WSBEiJ_G0025924.1 mouse_genomes_project 2 156188501 156189437 + MGP_WSBEiJ_P0057272 Mcts2 protein_coding protein_coding MGP_WSBEiJ_T0013447.1 MGP_WSBEiJ_G0011577.1 mouse_genomes_project 2 154359938 154360295 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055677.1 MGP_WSBEiJ_G0025550.1 mouse_genomes_project 2 115574657 115592551 - MGP_WSBEiJ_P0055677 Arhgap11a protein_coding protein_coding MGP_WSBEiJ_T0055678.1 MGP_WSBEiJ_G0025550.1 mouse_genomes_project 2 115574708 115592592 - MGP_WSBEiJ_P0055678 Arhgap11a protein_coding protein_coding MGP_WSBEiJ_T0055679.1 MGP_WSBEiJ_G0025550.1 mouse_genomes_project 2 115575625 115592023 - MGP_WSBEiJ_P0055679 Arhgap11a protein_coding protein_coding MGP_WSBEiJ_T0055680.1 MGP_WSBEiJ_G0025550.1 mouse_genomes_project 2 115575913 115592231 - MGP_WSBEiJ_P0055680 Arhgap11a protein_coding protein_coding MGP_WSBEiJ_T0010196.1 MGP_WSBEiJ_G0008353.1 mouse_genomes_project 2 7825252 7825348 + Mir466d miRNA miRNA MGP_WSBEiJ_T0013089.1 MGP_WSBEiJ_G0011219.1 mouse_genomes_project 2 12841689 12842485 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054354.1 MGP_WSBEiJ_G0025112.1 mouse_genomes_project 2 74577947 74581101 + MGP_WSBEiJ_P0054354 Hoxd10 protein_coding protein_coding MGP_WSBEiJ_T0007130.1 MGP_WSBEiJ_G0005850.1 mouse_genomes_project 2 74639067 74641152 - Haglr lincRNA lincRNA MGP_WSBEiJ_T0007131.1 MGP_WSBEiJ_G0005850.1 mouse_genomes_project 2 74641078 74655748 - Haglr lincRNA lincRNA MGP_WSBEiJ_T0054097.1 MGP_WSBEiJ_G0025064.1 mouse_genomes_project 2 69263325 69284279 + MGP_WSBEiJ_P0054097 Bbs5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0054098.1 MGP_WSBEiJ_G0025064.1 mouse_genomes_project 2 69263362 69284335 + MGP_WSBEiJ_P0054098 Bbs5 protein_coding protein_coding MGP_WSBEiJ_T0054099.1 MGP_WSBEiJ_G0025064.1 mouse_genomes_project 2 69263370 69284335 + MGP_WSBEiJ_P0054099 Bbs5 protein_coding protein_coding MGP_WSBEiJ_T0054100.1 MGP_WSBEiJ_G0025064.1 mouse_genomes_project 2 69263407 69269978 + Bbs5 protein_coding retained_intron MGP_WSBEiJ_T0054101.1 MGP_WSBEiJ_G0025064.1 mouse_genomes_project 2 69263417 69268821 + Bbs5 protein_coding retained_intron MGP_WSBEiJ_T0054102.1 MGP_WSBEiJ_G0025064.1 mouse_genomes_project 2 69271153 69281989 + Bbs5 protein_coding retained_intron MGP_WSBEiJ_T0054389.1 MGP_WSBEiJ_G0025127.1 mouse_genomes_project 2 76345778 76359581 + MGP_WSBEiJ_P0054389 Rbm45 protein_coding protein_coding MGP_WSBEiJ_T0007218.1 MGP_WSBEiJ_G0005921.1 mouse_genomes_project 2 131796759 131813342 + A730036I17Rik lincRNA lincRNA MGP_WSBEiJ_T0007219.1 MGP_WSBEiJ_G0005921.1 mouse_genomes_project 2 131796818 131811018 + A730036I17Rik lincRNA lincRNA MGP_WSBEiJ_T0007220.1 MGP_WSBEiJ_G0005921.1 mouse_genomes_project 2 131805808 131809735 + A730036I17Rik lincRNA lincRNA MGP_WSBEiJ_T0007087.1 MGP_WSBEiJ_G0005813.1 mouse_genomes_project 2 44472765 44493931 + Gm13465 lincRNA lincRNA MGP_WSBEiJ_T0051313.1 MGP_WSBEiJ_G0024578.1 mouse_genomes_project 2 591387 778205 + MGP_WSBEiJ_P0051313 Fam107b protein_coding protein_coding MGP_WSBEiJ_T0051314.1 MGP_WSBEiJ_G0024578.1 mouse_genomes_project 2 705714 780537 + MGP_WSBEiJ_P0051314 Fam107b protein_coding protein_coding MGP_WSBEiJ_T0051315.1 MGP_WSBEiJ_G0024578.1 mouse_genomes_project 2 705734 778339 + MGP_WSBEiJ_P0051315 Fam107b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051316.1 MGP_WSBEiJ_G0024578.1 mouse_genomes_project 2 768563 770829 + MGP_WSBEiJ_P0051316 Fam107b protein_coding protein_coding MGP_WSBEiJ_T0051317.1 MGP_WSBEiJ_G0024578.1 mouse_genomes_project 2 768589 780535 + MGP_WSBEiJ_P0051317 Fam107b protein_coding protein_coding MGP_WSBEiJ_T0051318.1 MGP_WSBEiJ_G0024578.1 mouse_genomes_project 2 771803 778043 + MGP_WSBEiJ_P0051318 Fam107b protein_coding protein_coding MGP_WSBEiJ_T0056583.1 MGP_WSBEiJ_G0025746.1 mouse_genomes_project 2 132401590 132431172 + MGP_WSBEiJ_P0056583 Stk35 protein_coding protein_coding MGP_WSBEiJ_T0056584.1 MGP_WSBEiJ_G0025746.1 mouse_genomes_project 2 132401590 132434497 + MGP_WSBEiJ_P0056584 Stk35 protein_coding protein_coding MGP_WSBEiJ_T0013286.1 MGP_WSBEiJ_G0011416.1 mouse_genomes_project 2 86852222 86855148 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052413.1 MGP_WSBEiJ_G0024767.1 mouse_genomes_project 2 24783531 24787348 + MGP_WSBEiJ_P0052413 Surf2 protein_coding protein_coding MGP_WSBEiJ_T0052414.1 MGP_WSBEiJ_G0024767.1 mouse_genomes_project 2 24783545 24787337 + Surf2 protein_coding processed_transcript MGP_WSBEiJ_T0052415.1 MGP_WSBEiJ_G0024767.1 mouse_genomes_project 2 24783833 24786986 + Surf2 protein_coding processed_transcript MGP_WSBEiJ_T0052416.1 MGP_WSBEiJ_G0024767.1 mouse_genomes_project 2 24783833 24787331 + Surf2 protein_coding retained_intron MGP_WSBEiJ_T0052417.1 MGP_WSBEiJ_G0024767.1 mouse_genomes_project 2 24783977 24787118 + Surf2 protein_coding processed_transcript MGP_WSBEiJ_T0052418.1 MGP_WSBEiJ_G0024767.1 mouse_genomes_project 2 24784592 24787000 + Surf2 protein_coding processed_transcript MGP_WSBEiJ_T0051869.1 MGP_WSBEiJ_G0024671.1 mouse_genomes_project 2 21886604 21898076 + MGP_WSBEiJ_P0051869 Il1f6 protein_coding protein_coding MGP_WSBEiJ_T0051870.1 MGP_WSBEiJ_G0024671.1 mouse_genomes_project 2 21886691 21897899 + Il1f6 protein_coding processed_transcript MGP_WSBEiJ_T0000991.1 MGP_WSBEiJ_G0000926.1 mouse_genomes_project 2 4089179 4102077 + TEC TEC MGP_WSBEiJ_T0003873.1 MGP_WSBEiJ_G0003458.1 mouse_genomes_project 2 30247542 30248243 - Gm13609 antisense antisense MGP_WSBEiJ_T0098086.1 MGP_WSBEiJ_G0036749.1 mouse_genomes_project 2 15742266 15742371 + Gm25147 snRNA snRNA MGP_WSBEiJ_T0097206.1 MGP_WSBEiJ_G0035887.1 mouse_genomes_project 2 108275803 108275926 + Gm22813 scaRNA scaRNA MGP_WSBEiJ_T0056911.1 MGP_WSBEiJ_G0025816.1 mouse_genomes_project 2 139964166 140001176 - MGP_WSBEiJ_P0056911 Jag1 protein_coding protein_coding MGP_WSBEiJ_T0056912.1 MGP_WSBEiJ_G0025816.1 mouse_genomes_project 2 139966624 139969680 - Jag1 protein_coding retained_intron MGP_WSBEiJ_T0055682.1 MGP_WSBEiJ_G0025552.1 mouse_genomes_project 2 115792039 115797655 - MGP_WSBEiJ_P0055682 Actc1 protein_coding protein_coding MGP_WSBEiJ_T0055683.1 MGP_WSBEiJ_G0025552.1 mouse_genomes_project 2 115796667 115798302 - MGP_WSBEiJ_P0055683 Actc1 protein_coding protein_coding MGP_WSBEiJ_T0052924.1 MGP_WSBEiJ_G0024848.1 mouse_genomes_project 2 29417048 29469532 + MGP_WSBEiJ_P0052924 Ncs1 protein_coding protein_coding MGP_WSBEiJ_T0052925.1 MGP_WSBEiJ_G0024848.1 mouse_genomes_project 2 29417391 29465876 + MGP_WSBEiJ_P0052925 Ncs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010325.1 MGP_WSBEiJ_G0008482.1 mouse_genomes_project 2 186090784 186090852 + Mir124a-3 miRNA miRNA MGP_WSBEiJ_T0052913.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29322327 29387771 + MGP_WSBEiJ_P0052913 Gpr107 protein_coding protein_coding MGP_WSBEiJ_T0052914.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29322344 29338897 + Gpr107 protein_coding retained_intron MGP_WSBEiJ_T0052915.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29322362 29362867 + Gpr107 protein_coding retained_intron MGP_WSBEiJ_T0052916.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29322362 29325569 + Gpr107 protein_coding retained_intron MGP_WSBEiJ_T0052917.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29341984 29354463 + Gpr107 protein_coding processed_transcript MGP_WSBEiJ_T0052918.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29354914 29378151 + Gpr107 protein_coding retained_intron MGP_WSBEiJ_T0052919.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29355244 29359501 + Gpr107 protein_coding processed_transcript MGP_WSBEiJ_T0052920.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29359519 29378333 + Gpr107 protein_coding retained_intron MGP_WSBEiJ_T0052921.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29367660 29376700 + Gpr107 protein_coding processed_transcript MGP_WSBEiJ_T0052922.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29375624 29379054 + Gpr107 protein_coding retained_intron MGP_WSBEiJ_T0052923.1 MGP_WSBEiJ_G0024847.1 mouse_genomes_project 2 29379091 29383564 + Gpr107 protein_coding retained_intron MGP_WSBEiJ_T0010321.1 MGP_WSBEiJ_G0008478.1 mouse_genomes_project 2 185304525 185304594 - Mir7005 miRNA miRNA MGP_WSBEiJ_T0003849.1 MGP_WSBEiJ_G0003440.1 mouse_genomes_project 2 24047422 24050004 + Gm27196 antisense antisense MGP_WSBEiJ_T0054093.1 MGP_WSBEiJ_G0025063.1 mouse_genomes_project 2 69026129 69194270 - MGP_WSBEiJ_P0054093 Lrp2 protein_coding protein_coding MGP_WSBEiJ_T0054094.1 MGP_WSBEiJ_G0025063.1 mouse_genomes_project 2 69110046 69194234 - MGP_WSBEiJ_P0054094 Lrp2 protein_coding protein_coding MGP_WSBEiJ_T0054095.1 MGP_WSBEiJ_G0025063.1 mouse_genomes_project 2 69111465 69112988 - Lrp2 protein_coding processed_transcript MGP_WSBEiJ_T0054096.1 MGP_WSBEiJ_G0025063.1 mouse_genomes_project 2 69133247 69194234 - MGP_WSBEiJ_P0054096 Lrp2 protein_coding protein_coding MGP_WSBEiJ_T0098124.1 MGP_WSBEiJ_G0036787.1 mouse_genomes_project 2 131900626 131900777 - Gm25703 snRNA snRNA MGP_WSBEiJ_T0054875.1 MGP_WSBEiJ_G0025354.1 mouse_genomes_project 2 90313851 90344949 - MGP_WSBEiJ_P0054875 Olfr1243 protein_coding protein_coding MGP_WSBEiJ_T0054877.1 MGP_WSBEiJ_G0025354.1 mouse_genomes_project 2 90344634 90347626 - Olfr1243 protein_coding processed_transcript MGP_WSBEiJ_T0056625.1 MGP_WSBEiJ_G0025756.1 mouse_genomes_project 2 133026658 133027470 + MGP_WSBEiJ_P0056625 1700020A23Rik protein_coding protein_coding MGP_WSBEiJ_T0056626.1 MGP_WSBEiJ_G0025756.1 mouse_genomes_project 2 133026664 133027418 + MGP_WSBEiJ_P0056626 1700020A23Rik protein_coding protein_coding MGP_WSBEiJ_T0056627.1 MGP_WSBEiJ_G0025756.1 mouse_genomes_project 2 133026685 133027474 + MGP_WSBEiJ_P0056627 1700020A23Rik protein_coding protein_coding MGP_WSBEiJ_T0058589.1 MGP_WSBEiJ_G0026229.1 mouse_genomes_project 2 185146415 185156885 + MGP_WSBEiJ_P0058589 Lsm14b protein_coding protein_coding MGP_WSBEiJ_T0058590.1 MGP_WSBEiJ_G0026229.1 mouse_genomes_project 2 185146614 185156892 + MGP_WSBEiJ_P0058590 Lsm14b protein_coding protein_coding MGP_WSBEiJ_T0058591.1 MGP_WSBEiJ_G0026229.1 mouse_genomes_project 2 185149337 185155234 + Lsm14b protein_coding processed_transcript MGP_WSBEiJ_T0053795.1 MGP_WSBEiJ_G0025012.1 mouse_genomes_project 2 57402191 57497802 - MGP_WSBEiJ_P0053795 Acvr1c protein_coding protein_coding MGP_WSBEiJ_T0053796.1 MGP_WSBEiJ_G0025012.1 mouse_genomes_project 2 57409496 57497659 - MGP_WSBEiJ_P0053796 Acvr1c protein_coding protein_coding MGP_WSBEiJ_T0053797.1 MGP_WSBEiJ_G0025012.1 mouse_genomes_project 2 57409496 57497659 - MGP_WSBEiJ_P0053797 Acvr1c protein_coding protein_coding MGP_WSBEiJ_T0053798.1 MGP_WSBEiJ_G0025012.1 mouse_genomes_project 2 57409679 57497587 - MGP_WSBEiJ_P0053798 Acvr1c protein_coding protein_coding MGP_WSBEiJ_T0053799.1 MGP_WSBEiJ_G0025012.1 mouse_genomes_project 2 57434898 57468064 - MGP_WSBEiJ_P0053799 Acvr1c protein_coding protein_coding MGP_WSBEiJ_T0053039.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552546 30604189 - MGP_WSBEiJ_P0053039 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053040.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552546 30604150 - MGP_WSBEiJ_P0053040 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053041.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552546 30604171 - MGP_WSBEiJ_P0053041 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053042.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552546 30604170 - MGP_WSBEiJ_P0053042 Dnm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053043.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552546 30604177 - MGP_WSBEiJ_P0053043 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053044.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552546 30604225 - MGP_WSBEiJ_P0053044 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053045.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552553 30604121 - MGP_WSBEiJ_P0053045 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053046.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552572 30566172 - MGP_WSBEiJ_P0053046 Dnm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053047.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552916 30604157 - MGP_WSBEiJ_P0053047 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053048.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30552999 30554711 - Dnm1 protein_coding retained_intron MGP_WSBEiJ_T0053049.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30553550 30556999 - MGP_WSBEiJ_P0053049 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053050.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30553554 30604189 - MGP_WSBEiJ_P0053050 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053051.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30553925 30556969 - MGP_WSBEiJ_P0053051 Dnm1 protein_coding protein_coding MGP_WSBEiJ_T0053052.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30554338 30556965 - MGP_WSBEiJ_P0053052 Dnm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053053.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30556302 30562925 - Dnm1 protein_coding processed_transcript MGP_WSBEiJ_T0053054.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30556317 30557153 - Dnm1 protein_coding retained_intron MGP_WSBEiJ_T0053055.1 MGP_WSBEiJ_G0024867.1 mouse_genomes_project 2 30586783 30604138 - MGP_WSBEiJ_P0053055 Dnm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056907.1 MGP_WSBEiJ_G0025815.1 mouse_genomes_project 2 139764315 139952651 + MGP_WSBEiJ_P0056907 Slx4ip protein_coding protein_coding MGP_WSBEiJ_T0056908.1 MGP_WSBEiJ_G0025815.1 mouse_genomes_project 2 139764598 139880574 + MGP_WSBEiJ_P0056908 Slx4ip protein_coding protein_coding MGP_WSBEiJ_T0056909.1 MGP_WSBEiJ_G0025815.1 mouse_genomes_project 2 139765263 139949474 + Slx4ip protein_coding processed_transcript MGP_WSBEiJ_T0056910.1 MGP_WSBEiJ_G0025815.1 mouse_genomes_project 2 139782040 139952651 + MGP_WSBEiJ_P0056910 Slx4ip protein_coding protein_coding MGP_WSBEiJ_T0010217.1 MGP_WSBEiJ_G0008374.1 mouse_genomes_project 2 22787022 22787089 - Gm24328 miRNA miRNA MGP_WSBEiJ_T0053551.1 MGP_WSBEiJ_G0024971.1 mouse_genomes_project 2 37497503 37508086 + MGP_WSBEiJ_P0053551 Wdr38 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053552.1 MGP_WSBEiJ_G0024971.1 mouse_genomes_project 2 37498346 37503538 + MGP_WSBEiJ_P0053552 Wdr38 protein_coding protein_coding MGP_WSBEiJ_T0053553.1 MGP_WSBEiJ_G0024971.1 mouse_genomes_project 2 37498359 37500302 + Wdr38 protein_coding processed_transcript MGP_WSBEiJ_T0053554.1 MGP_WSBEiJ_G0024971.1 mouse_genomes_project 2 37498435 37501402 + MGP_WSBEiJ_P0053554 Wdr38 protein_coding unknown_likely_coding MGP_WSBEiJ_T0013190.1 MGP_WSBEiJ_G0011320.1 mouse_genomes_project 2 51326923 51328837 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054597.1 MGP_WSBEiJ_G0025162.1 mouse_genomes_project 2 84996780 85082509 - MGP_WSBEiJ_P0054597 protein_coding protein_coding MGP_WSBEiJ_T0058705.1 MGP_WSBEiJ_G0026255.1 mouse_genomes_project 2 186188519 186218335 + MGP_WSBEiJ_P0058705 Col20a1 protein_coding protein_coding MGP_WSBEiJ_T0058706.1 MGP_WSBEiJ_G0026255.1 mouse_genomes_project 2 186188519 186219547 + MGP_WSBEiJ_P0058706 Col20a1 protein_coding protein_coding MGP_WSBEiJ_T0058707.1 MGP_WSBEiJ_G0026255.1 mouse_genomes_project 2 186191041 186223260 + MGP_WSBEiJ_P0058707 Col20a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0058708.1 MGP_WSBEiJ_G0026255.1 mouse_genomes_project 2 186202502 186205489 + MGP_WSBEiJ_P0058708 Col20a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058709.1 MGP_WSBEiJ_G0026255.1 mouse_genomes_project 2 186215268 186219547 + MGP_WSBEiJ_P0058709 Col20a1 protein_coding protein_coding MGP_WSBEiJ_T0057263.1 MGP_WSBEiJ_G0025921.1 mouse_genomes_project 2 156120715 156121431 - MGP_WSBEiJ_P0057263 Defb25 protein_coding protein_coding MGP_WSBEiJ_T0099352.1 MGP_WSBEiJ_G0038015.1 mouse_genomes_project 2 48232964 48233085 - Gm25215 snoRNA snoRNA MGP_WSBEiJ_T0057346.1 MGP_WSBEiJ_G0025942.1 mouse_genomes_project 2 156881463 156941205 + MGP_WSBEiJ_P0057346 Asxl1 protein_coding protein_coding MGP_WSBEiJ_T0057347.1 MGP_WSBEiJ_G0025942.1 mouse_genomes_project 2 156881887 156941212 + MGP_WSBEiJ_P0057347 Asxl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0057348.1 MGP_WSBEiJ_G0025942.1 mouse_genomes_project 2 156883227 156892756 + Asxl1 protein_coding processed_transcript MGP_WSBEiJ_T0057349.1 MGP_WSBEiJ_G0025942.1 mouse_genomes_project 2 156883355 156928764 + Asxl1 protein_coding processed_transcript MGP_WSBEiJ_T0057350.1 MGP_WSBEiJ_G0025942.1 mouse_genomes_project 2 156930029 156934016 + Asxl1 protein_coding retained_intron MGP_WSBEiJ_T0001008.1 MGP_WSBEiJ_G0000943.1 mouse_genomes_project 2 10396056 10397669 + TEC TEC MGP_WSBEiJ_T0056764.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134161818 134192165 + MGP_WSBEiJ_P0056764 Smox protein_coding protein_coding MGP_WSBEiJ_T0056765.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162086 134197124 + MGP_WSBEiJ_P0056765 Smox protein_coding protein_coding MGP_WSBEiJ_T0056766.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162245 134192204 + MGP_WSBEiJ_P0056766 Smox protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056767.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162265 134197113 + Smox protein_coding retained_intron MGP_WSBEiJ_T0056768.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162265 134197113 + MGP_WSBEiJ_P0056768 Smox protein_coding protein_coding MGP_WSBEiJ_T0056769.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162265 134197113 + MGP_WSBEiJ_P0056769 Smox protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056770.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162265 134197113 + MGP_WSBEiJ_P0056770 Smox protein_coding protein_coding MGP_WSBEiJ_T0056771.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162265 134197113 + MGP_WSBEiJ_P0056771 Smox protein_coding protein_coding MGP_WSBEiJ_T0056772.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162265 134197113 + MGP_WSBEiJ_P0056772 Smox protein_coding protein_coding MGP_WSBEiJ_T0056773.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162265 134197113 + MGP_WSBEiJ_P0056773 Smox protein_coding protein_coding MGP_WSBEiJ_T0056774.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162265 134197113 + MGP_WSBEiJ_P0056774 Smox protein_coding protein_coding MGP_WSBEiJ_T0056775.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162286 134197863 + MGP_WSBEiJ_P0056775 Smox protein_coding protein_coding MGP_WSBEiJ_T0056776.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162315 134197108 + MGP_WSBEiJ_P0056776 Smox protein_coding protein_coding MGP_WSBEiJ_T0056777.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134162586 134184037 + MGP_WSBEiJ_P0056777 Smox protein_coding protein_coding MGP_WSBEiJ_T0056778.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134180814 134184074 + Smox protein_coding processed_transcript MGP_WSBEiJ_T0056779.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134192107 134196820 + MGP_WSBEiJ_P0056779 Smox protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056780.1 MGP_WSBEiJ_G0025785.1 mouse_genomes_project 2 134193856 134197082 + Smox protein_coding retained_intron MGP_WSBEiJ_T0054821.1 MGP_WSBEiJ_G0025308.1 mouse_genomes_project 2 89119795 89120725 - MGP_WSBEiJ_P0054821 Olfr1180 protein_coding protein_coding MGP_WSBEiJ_T0051454.1 MGP_WSBEiJ_G0024599.1 mouse_genomes_project 2 7136898 7158757 - MGP_WSBEiJ_P0051454 Gata3 protein_coding protein_coding MGP_WSBEiJ_T0051455.1 MGP_WSBEiJ_G0024599.1 mouse_genomes_project 2 7143708 7153821 - Gata3 protein_coding processed_transcript MGP_WSBEiJ_T0051456.1 MGP_WSBEiJ_G0024599.1 mouse_genomes_project 2 7154635 7155548 - Gata3 protein_coding processed_transcript MGP_WSBEiJ_T0051457.1 MGP_WSBEiJ_G0024599.1 mouse_genomes_project 2 7154850 7170210 - MGP_WSBEiJ_P0051457 Gata3 protein_coding protein_coding MGP_WSBEiJ_T0051458.1 MGP_WSBEiJ_G0024599.1 mouse_genomes_project 2 7157989 7167938 - Gata3 protein_coding processed_transcript MGP_WSBEiJ_T0051459.1 MGP_WSBEiJ_G0024599.1 mouse_genomes_project 2 7158043 7170178 - Gata3 protein_coding processed_transcript MGP_WSBEiJ_T0099357.1 MGP_WSBEiJ_G0038020.1 mouse_genomes_project 2 60534539 60534671 + Gm26422 snoRNA snoRNA MGP_WSBEiJ_T0058899.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187068607 187087919 + MGP_WSBEiJ_P0058899 Pcmtd2 protein_coding protein_coding MGP_WSBEiJ_T0058900.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187068666 187087904 + MGP_WSBEiJ_P0058900 Pcmtd2 protein_coding protein_coding MGP_WSBEiJ_T0058901.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187071596 187077387 + MGP_WSBEiJ_P0058901 Pcmtd2 protein_coding protein_coding MGP_WSBEiJ_T0058902.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187073221 187077441 + Pcmtd2 protein_coding retained_intron MGP_WSBEiJ_T0058903.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187075229 187085796 + MGP_WSBEiJ_P0058903 Pcmtd2 protein_coding protein_coding MGP_WSBEiJ_T0058904.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187081415 187086060 + Pcmtd2 protein_coding processed_transcript MGP_WSBEiJ_T0058905.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187081423 187085935 + Pcmtd2 protein_coding processed_transcript MGP_WSBEiJ_T0058906.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187081457 187085713 + Pcmtd2 protein_coding processed_transcript MGP_WSBEiJ_T0058907.1 MGP_WSBEiJ_G0026285.1 mouse_genomes_project 2 187082020 187085963 + Pcmtd2 protein_coding retained_intron MGP_WSBEiJ_T0054806.1 MGP_WSBEiJ_G0025294.1 mouse_genomes_project 2 88615878 88616851 - MGP_WSBEiJ_P0054806 Olfr1156 protein_coding protein_coding MGP_WSBEiJ_T0007104.1 MGP_WSBEiJ_G0005828.1 mouse_genomes_project 2 59297009 59297737 + Gm13620 lincRNA lincRNA MGP_WSBEiJ_T0013353.1 MGP_WSBEiJ_G0011483.1 mouse_genomes_project 2 111032048 111032534 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013234.1 MGP_WSBEiJ_G0011364.1 mouse_genomes_project 2 69360967 69361400 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003877.1 MGP_WSBEiJ_G0003462.1 mouse_genomes_project 2 31489935 31493928 + Gm13528 antisense antisense MGP_WSBEiJ_T0056837.1 MGP_WSBEiJ_G0025800.1 mouse_genomes_project 2 135534821 135541239 - Trmt6 protein_coding retained_intron MGP_WSBEiJ_T0056838.1 MGP_WSBEiJ_G0025800.1 mouse_genomes_project 2 135534821 135546647 - Trmt6 protein_coding processed_transcript MGP_WSBEiJ_T0056839.1 MGP_WSBEiJ_G0025800.1 mouse_genomes_project 2 135534821 135546646 - MGP_WSBEiJ_P0056839 Trmt6 protein_coding protein_coding MGP_WSBEiJ_T0056840.1 MGP_WSBEiJ_G0025800.1 mouse_genomes_project 2 135541020 135546350 - Trmt6 protein_coding processed_transcript MGP_WSBEiJ_T0056841.1 MGP_WSBEiJ_G0025800.1 mouse_genomes_project 2 135541045 135543097 - Trmt6 protein_coding processed_transcript MGP_WSBEiJ_T0056842.1 MGP_WSBEiJ_G0025800.1 mouse_genomes_project 2 135542356 135546605 - Trmt6 protein_coding processed_transcript MGP_WSBEiJ_T0003834.1 MGP_WSBEiJ_G0003429.1 mouse_genomes_project 2 17937910 17973836 - Gm17171 antisense antisense MGP_WSBEiJ_T0058305.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171284261 171338894 - MGP_WSBEiJ_P0058305 Stau1 protein_coding protein_coding MGP_WSBEiJ_T0058306.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171284858 171292095 - Stau1 protein_coding retained_intron MGP_WSBEiJ_T0058307.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171284858 171338881 - MGP_WSBEiJ_P0058307 Stau1 protein_coding protein_coding MGP_WSBEiJ_T0058308.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171284858 171338719 - MGP_WSBEiJ_P0058308 Stau1 protein_coding protein_coding MGP_WSBEiJ_T0058309.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171284984 171338915 - MGP_WSBEiJ_P0058309 Stau1 protein_coding protein_coding MGP_WSBEiJ_T0058310.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171285957 171287943 - Stau1 protein_coding retained_intron MGP_WSBEiJ_T0058311.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171286003 171301359 - MGP_WSBEiJ_P0058311 Stau1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058312.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171286405 171287668 - Stau1 protein_coding retained_intron MGP_WSBEiJ_T0058313.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171289015 171297028 - Stau1 protein_coding retained_intron MGP_WSBEiJ_T0058314.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171289619 171300084 - Stau1 protein_coding retained_intron MGP_WSBEiJ_T0058315.1 MGP_WSBEiJ_G0026154.1 mouse_genomes_project 2 171300149 171315101 - Stau1 protein_coding processed_transcript MGP_WSBEiJ_T0052966.1 MGP_WSBEiJ_G0024857.1 mouse_genomes_project 2 30106851 30171134 + MGP_WSBEiJ_P0052966 Lamc3 protein_coding protein_coding MGP_WSBEiJ_T0052967.1 MGP_WSBEiJ_G0024857.1 mouse_genomes_project 2 30106904 30172427 + MGP_WSBEiJ_P0052967 Lamc3 protein_coding protein_coding MGP_WSBEiJ_T0052968.1 MGP_WSBEiJ_G0024857.1 mouse_genomes_project 2 30148457 30149096 + Lamc3 protein_coding processed_transcript MGP_WSBEiJ_T0003878.1 MGP_WSBEiJ_G0003463.1 mouse_genomes_project 2 31768325 31770733 + Gm13536 antisense antisense MGP_WSBEiJ_T0052434.1 MGP_WSBEiJ_G0024772.1 mouse_genomes_project 2 24877737 24884663 + MGP_WSBEiJ_P0052434 Cacfd1 protein_coding protein_coding MGP_WSBEiJ_T0052435.1 MGP_WSBEiJ_G0024772.1 mouse_genomes_project 2 24877737 24885238 + MGP_WSBEiJ_P0052435 Cacfd1 protein_coding protein_coding MGP_WSBEiJ_T0052436.1 MGP_WSBEiJ_G0024772.1 mouse_genomes_project 2 24877737 24889134 + MGP_WSBEiJ_P0052436 Cacfd1 protein_coding protein_coding MGP_WSBEiJ_T0052437.1 MGP_WSBEiJ_G0024772.1 mouse_genomes_project 2 24877737 24889134 + MGP_WSBEiJ_P0052437 Cacfd1 protein_coding protein_coding MGP_WSBEiJ_T0052438.1 MGP_WSBEiJ_G0024772.1 mouse_genomes_project 2 24877824 24886235 + Cacfd1 protein_coding processed_transcript MGP_WSBEiJ_T0052439.1 MGP_WSBEiJ_G0024772.1 mouse_genomes_project 2 24877893 24883717 + MGP_WSBEiJ_P0052439 Cacfd1 protein_coding protein_coding MGP_WSBEiJ_T0052440.1 MGP_WSBEiJ_G0024772.1 mouse_genomes_project 2 24878404 24888343 + MGP_WSBEiJ_P0052440 Cacfd1 protein_coding protein_coding MGP_WSBEiJ_T0052441.1 MGP_WSBEiJ_G0024772.1 mouse_genomes_project 2 24883396 24885249 + Cacfd1 protein_coding retained_intron MGP_WSBEiJ_T0054923.1 MGP_WSBEiJ_G0025383.1 mouse_genomes_project 2 91350316 91414512 + MGP_WSBEiJ_P0054923 Nup160 protein_coding protein_coding MGP_WSBEiJ_T0054924.1 MGP_WSBEiJ_G0025383.1 mouse_genomes_project 2 91358279 91366881 + Nup160 protein_coding processed_transcript MGP_WSBEiJ_T0054925.1 MGP_WSBEiJ_G0025383.1 mouse_genomes_project 2 91363478 91368601 + Nup160 protein_coding processed_transcript MGP_WSBEiJ_T0054926.1 MGP_WSBEiJ_G0025383.1 mouse_genomes_project 2 91364465 91380148 + Nup160 protein_coding processed_transcript MGP_WSBEiJ_T0054927.1 MGP_WSBEiJ_G0025383.1 mouse_genomes_project 2 91377407 91379761 + Nup160 protein_coding processed_transcript MGP_WSBEiJ_T0054928.1 MGP_WSBEiJ_G0025383.1 mouse_genomes_project 2 91395728 91396081 + Nup160 protein_coding processed_transcript MGP_WSBEiJ_T0054929.1 MGP_WSBEiJ_G0025383.1 mouse_genomes_project 2 91410907 91413968 + Nup160 protein_coding processed_transcript MGP_WSBEiJ_T0055602.1 MGP_WSBEiJ_G0025507.1 mouse_genomes_project 2 112903774 112904686 - MGP_WSBEiJ_P0055602 Olfr1277 protein_coding protein_coding MGP_WSBEiJ_T0058456.1 MGP_WSBEiJ_G0026187.1 mouse_genomes_project 2 175424183 175582362 + MGP_WSBEiJ_P0058456 Dok5 protein_coding protein_coding MGP_WSBEiJ_T0013405.1 MGP_WSBEiJ_G0011535.1 mouse_genomes_project 2 135795203 135795569 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003985.1 MGP_WSBEiJ_G0003537.1 mouse_genomes_project 2 120817443 120821610 - Gm14091 antisense antisense MGP_WSBEiJ_T0053144.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30952717 30965321 - MGP_WSBEiJ_P0053144 Fpgs protein_coding protein_coding MGP_WSBEiJ_T0053145.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30952718 30965271 - Fpgs protein_coding retained_intron MGP_WSBEiJ_T0053146.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30952925 30956039 - Fpgs protein_coding retained_intron MGP_WSBEiJ_T0053147.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30953410 30955087 - Fpgs protein_coding processed_transcript MGP_WSBEiJ_T0053148.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30956584 30957585 - Fpgs protein_coding retained_intron MGP_WSBEiJ_T0053149.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30956931 30978807 - MGP_WSBEiJ_P0053149 Fpgs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053150.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30957096 30957920 - Fpgs protein_coding retained_intron MGP_WSBEiJ_T0053151.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30957498 30978815 - MGP_WSBEiJ_P0053151 Fpgs protein_coding protein_coding MGP_WSBEiJ_T0053152.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30963586 30964380 - Fpgs protein_coding retained_intron MGP_WSBEiJ_T0053153.1 MGP_WSBEiJ_G0024882.1 mouse_genomes_project 2 30963848 30978701 - MGP_WSBEiJ_P0053153 Fpgs protein_coding protein_coding MGP_WSBEiJ_T0001062.1 MGP_WSBEiJ_G0000997.1 mouse_genomes_project 2 129752646 129753268 - TEC TEC MGP_WSBEiJ_T0001063.1 MGP_WSBEiJ_G0000997.1 mouse_genomes_project 2 129752922 129753246 - TEC TEC MGP_WSBEiJ_T0017240.1 MGP_WSBEiJ_G0014875.1 mouse_genomes_project 2 115137347 115148700 + Gm13965 processed_transcript processed_transcript MGP_WSBEiJ_T0057851.1 MGP_WSBEiJ_G0026040.1 mouse_genomes_project 2 162116271 162144259 + MGP_WSBEiJ_P0057851 Bpi protein_coding protein_coding MGP_WSBEiJ_T0057852.1 MGP_WSBEiJ_G0026040.1 mouse_genomes_project 2 162116271 162144123 + MGP_WSBEiJ_P0057852 Bpi protein_coding protein_coding MGP_WSBEiJ_T0057853.1 MGP_WSBEiJ_G0026040.1 mouse_genomes_project 2 162116271 162144262 + MGP_WSBEiJ_P0057853 Bpi protein_coding protein_coding MGP_WSBEiJ_T0007250.1 MGP_WSBEiJ_G0005947.1 mouse_genomes_project 2 155295381 155298420 + Gm14155 lincRNA lincRNA MGP_WSBEiJ_T0052200.1 MGP_WSBEiJ_G0024726.1 mouse_genomes_project 2 23391430 23393369 - MGP_WSBEiJ_P0052200 Tmem141 protein_coding protein_coding MGP_WSBEiJ_T0052201.1 MGP_WSBEiJ_G0024726.1 mouse_genomes_project 2 23391430 23393349 - MGP_WSBEiJ_P0052201 Tmem141 protein_coding protein_coding MGP_WSBEiJ_T0052202.1 MGP_WSBEiJ_G0024726.1 mouse_genomes_project 2 23391467 23393327 - Tmem141 protein_coding processed_transcript MGP_WSBEiJ_T0052203.1 MGP_WSBEiJ_G0024726.1 mouse_genomes_project 2 23391690 23393144 - Tmem141 protein_coding processed_transcript MGP_WSBEiJ_T0052204.1 MGP_WSBEiJ_G0024726.1 mouse_genomes_project 2 23392410 23393335 - Tmem141 protein_coding processed_transcript MGP_WSBEiJ_T0052205.1 MGP_WSBEiJ_G0024726.1 mouse_genomes_project 2 23392410 23393332 - Tmem141 protein_coding processed_transcript MGP_WSBEiJ_T0052206.1 MGP_WSBEiJ_G0024726.1 mouse_genomes_project 2 23392857 23393271 - Tmem141 protein_coding processed_transcript MGP_WSBEiJ_T0013299.1 MGP_WSBEiJ_G0011429.1 mouse_genomes_project 2 88570108 88570635 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001030.1 MGP_WSBEiJ_G0000965.1 mouse_genomes_project 2 31302054 31307264 - TEC TEC MGP_WSBEiJ_T0013119.1 MGP_WSBEiJ_G0011249.1 mouse_genomes_project 2 21849644 21851128 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057831.1 MGP_WSBEiJ_G0026035.1 mouse_genomes_project 2 161754555 161785534 + MGP_WSBEiJ_P0057831 Vstm2l protein_coding protein_coding MGP_WSBEiJ_T0013098.1 MGP_WSBEiJ_G0011228.1 mouse_genomes_project 2 15762566 15762980 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055307.1 MGP_WSBEiJ_G0025440.1 mouse_genomes_project 2 97240392 98600577 + MGP_WSBEiJ_P0055307 Lrrc4c protein_coding protein_coding MGP_WSBEiJ_T0055308.1 MGP_WSBEiJ_G0025440.1 mouse_genomes_project 2 97240439 98599897 + MGP_WSBEiJ_P0055308 Lrrc4c protein_coding protein_coding MGP_WSBEiJ_T0055309.1 MGP_WSBEiJ_G0025440.1 mouse_genomes_project 2 98422322 98600575 + MGP_WSBEiJ_P0055309 Lrrc4c protein_coding protein_coding MGP_WSBEiJ_T0055310.1 MGP_WSBEiJ_G0025440.1 mouse_genomes_project 2 98422754 98597977 + MGP_WSBEiJ_P0055310 Lrrc4c protein_coding protein_coding MGP_WSBEiJ_T0003862.1 MGP_WSBEiJ_G0003448.1 mouse_genomes_project 2 27348798 27396699 - Gm13402 antisense antisense MGP_WSBEiJ_T0007136.1 MGP_WSBEiJ_G0005855.1 mouse_genomes_project 2 75369794 75377887 + Gm13658 lincRNA lincRNA MGP_WSBEiJ_T0057085.1 MGP_WSBEiJ_G0025857.1 mouse_genomes_project 2 150435487 150444717 - MGP_WSBEiJ_P0057085 Nkx2-2 protein_coding protein_coding MGP_WSBEiJ_T0057086.1 MGP_WSBEiJ_G0025857.1 mouse_genomes_project 2 150441877 150445021 - MGP_WSBEiJ_P0057086 Nkx2-2 protein_coding protein_coding MGP_WSBEiJ_T0057087.1 MGP_WSBEiJ_G0025857.1 mouse_genomes_project 2 150444921 150452448 - Nkx2-2 protein_coding processed_transcript MGP_WSBEiJ_T0057088.1 MGP_WSBEiJ_G0025857.1 mouse_genomes_project 2 150444998 150452447 - Nkx2-2 protein_coding processed_transcript MGP_WSBEiJ_T0013331.1 MGP_WSBEiJ_G0011461.1 mouse_genomes_project 2 104843466 104843896 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013148.1 MGP_WSBEiJ_G0011278.1 mouse_genomes_project 2 35646005 35647028 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052581.1 MGP_WSBEiJ_G0024803.1 mouse_genomes_project 2 27096830 27112715 + MGP_WSBEiJ_P0052581 Setx protein_coding protein_coding MGP_WSBEiJ_T0052582.1 MGP_WSBEiJ_G0024803.1 mouse_genomes_project 2 27097655 27170556 + MGP_WSBEiJ_P0052582 Setx protein_coding protein_coding MGP_WSBEiJ_T0052583.1 MGP_WSBEiJ_G0024803.1 mouse_genomes_project 2 27098549 27112919 + Setx protein_coding retained_intron MGP_WSBEiJ_T0052584.1 MGP_WSBEiJ_G0024803.1 mouse_genomes_project 2 27143624 27149730 + Setx protein_coding processed_transcript MGP_WSBEiJ_T0052585.1 MGP_WSBEiJ_G0024803.1 mouse_genomes_project 2 27151425 27167625 + MGP_WSBEiJ_P0052585 Setx protein_coding protein_coding MGP_WSBEiJ_T0057768.1 MGP_WSBEiJ_G0026024.1 mouse_genomes_project 2 160865041 160875104 + MGP_WSBEiJ_P0057768 Tldc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0057769.1 MGP_WSBEiJ_G0026024.1 mouse_genomes_project 2 160866602 160874632 + MGP_WSBEiJ_P0057769 Tldc2 protein_coding protein_coding MGP_WSBEiJ_T0053021.1 MGP_WSBEiJ_G0024865.1 mouse_genomes_project 2 30522888 30532148 - MGP_WSBEiJ_P0053021 Swi5 protein_coding protein_coding MGP_WSBEiJ_T0053022.1 MGP_WSBEiJ_G0024865.1 mouse_genomes_project 2 30522888 30526938 - MGP_WSBEiJ_P0053022 Swi5 protein_coding protein_coding MGP_WSBEiJ_T0053023.1 MGP_WSBEiJ_G0024865.1 mouse_genomes_project 2 30522888 30532085 - MGP_WSBEiJ_P0053023 Swi5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053024.1 MGP_WSBEiJ_G0024865.1 mouse_genomes_project 2 30522888 30532015 - MGP_WSBEiJ_P0053024 Swi5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0053025.1 MGP_WSBEiJ_G0024865.1 mouse_genomes_project 2 30522888 30532155 - MGP_WSBEiJ_P0053025 Swi5 protein_coding protein_coding MGP_WSBEiJ_T0053026.1 MGP_WSBEiJ_G0024865.1 mouse_genomes_project 2 30522990 30532149 - MGP_WSBEiJ_P0053026 Swi5 protein_coding protein_coding MGP_WSBEiJ_T0053027.1 MGP_WSBEiJ_G0024865.1 mouse_genomes_project 2 30527354 30532111 - Swi5 protein_coding retained_intron MGP_WSBEiJ_T0054776.1 MGP_WSBEiJ_G0025274.1 mouse_genomes_project 2 88170283 88173615 - MGP_WSBEiJ_P0054776 Pramel7 protein_coding protein_coding MGP_WSBEiJ_T0054777.1 MGP_WSBEiJ_G0025274.1 mouse_genomes_project 2 88172080 88178088 - Pramel7 protein_coding processed_transcript MGP_WSBEiJ_T0054778.1 MGP_WSBEiJ_G0025274.1 mouse_genomes_project 2 88172174 88178255 - Pramel7 protein_coding processed_transcript MGP_WSBEiJ_T0054779.1 MGP_WSBEiJ_G0025274.1 mouse_genomes_project 2 88172316 88178097 - Pramel7 protein_coding processed_transcript MGP_WSBEiJ_T0017263.1 MGP_WSBEiJ_G0014885.1 mouse_genomes_project 2 124986736 125002564 + 4930417H01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017264.1 MGP_WSBEiJ_G0014885.1 mouse_genomes_project 2 124987596 125005040 + 4930417H01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017265.1 MGP_WSBEiJ_G0014885.1 mouse_genomes_project 2 124987598 125002564 + 4930417H01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017266.1 MGP_WSBEiJ_G0014885.1 mouse_genomes_project 2 124988932 125005041 + 4930417H01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017267.1 MGP_WSBEiJ_G0014885.1 mouse_genomes_project 2 124988934 125002675 + 4930417H01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017268.1 MGP_WSBEiJ_G0014885.1 mouse_genomes_project 2 124992739 125005900 + 4930417H01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0051356.1 MGP_WSBEiJ_G0024584.1 mouse_genomes_project 2 2019783 2030939 + MGP_WSBEiJ_P0051356 Ucma protein_coding protein_coding MGP_WSBEiJ_T0051357.1 MGP_WSBEiJ_G0024584.1 mouse_genomes_project 2 2019786 2026534 + Ucma protein_coding processed_transcript MGP_WSBEiJ_T0051358.1 MGP_WSBEiJ_G0024584.1 mouse_genomes_project 2 2019812 2030931 + MGP_WSBEiJ_P0051358 Ucma protein_coding protein_coding MGP_WSBEiJ_T0051359.1 MGP_WSBEiJ_G0024584.1 mouse_genomes_project 2 2019842 2030936 + MGP_WSBEiJ_P0051359 Ucma protein_coding protein_coding MGP_WSBEiJ_T0051360.1 MGP_WSBEiJ_G0024584.1 mouse_genomes_project 2 2019845 2030836 + MGP_WSBEiJ_P0051360 Ucma protein_coding protein_coding MGP_WSBEiJ_T0053921.1 MGP_WSBEiJ_G0025030.1 mouse_genomes_project 2 60992497 61088639 + MGP_WSBEiJ_P0053921 Psmd14 protein_coding protein_coding MGP_WSBEiJ_T0053922.1 MGP_WSBEiJ_G0025030.1 mouse_genomes_project 2 60992545 61004091 + Psmd14 protein_coding processed_transcript MGP_WSBEiJ_T0053923.1 MGP_WSBEiJ_G0025030.1 mouse_genomes_project 2 60992563 61049959 + Psmd14 protein_coding processed_transcript MGP_WSBEiJ_T0053924.1 MGP_WSBEiJ_G0025030.1 mouse_genomes_project 2 60992583 61010805 + Psmd14 protein_coding processed_transcript MGP_WSBEiJ_T0053925.1 MGP_WSBEiJ_G0025030.1 mouse_genomes_project 2 60992594 61046428 + Psmd14 protein_coding processed_transcript MGP_WSBEiJ_T0053926.1 MGP_WSBEiJ_G0025030.1 mouse_genomes_project 2 60996626 61036153 + Psmd14 protein_coding processed_transcript MGP_WSBEiJ_T0053927.1 MGP_WSBEiJ_G0025030.1 mouse_genomes_project 2 61050438 61088316 + Psmd14 protein_coding processed_transcript MGP_WSBEiJ_T0053928.1 MGP_WSBEiJ_G0025030.1 mouse_genomes_project 2 61063787 61088337 + Psmd14 protein_coding processed_transcript MGP_WSBEiJ_T0057371.1 MGP_WSBEiJ_G0025948.1 mouse_genomes_project 2 157455959 157472297 - MGP_WSBEiJ_P0057371 Sun5 protein_coding protein_coding MGP_WSBEiJ_T0057372.1 MGP_WSBEiJ_G0025948.1 mouse_genomes_project 2 157461585 157472297 - Sun5 protein_coding processed_transcript MGP_WSBEiJ_T0057373.1 MGP_WSBEiJ_G0025948.1 mouse_genomes_project 2 157466617 157472297 - Sun5 protein_coding processed_transcript MGP_WSBEiJ_T0100718.1 MGP_WSBEiJ_G0039176.1 mouse_genomes_project 2 87914897 87965331 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013293.1 MGP_WSBEiJ_G0011423.1 mouse_genomes_project 2 88201079 88201489 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055089.1 MGP_WSBEiJ_G0025403.1 mouse_genomes_project 2 92216583 92239562 + Lrp4 protein_coding processed_transcript MGP_WSBEiJ_T0055090.1 MGP_WSBEiJ_G0025403.1 mouse_genomes_project 2 92216583 92274712 + MGP_WSBEiJ_P0055090 Lrp4 protein_coding protein_coding MGP_WSBEiJ_T0055091.1 MGP_WSBEiJ_G0025403.1 mouse_genomes_project 2 92236530 92241141 + Lrp4 protein_coding processed_transcript MGP_WSBEiJ_T0055092.1 MGP_WSBEiJ_G0025403.1 mouse_genomes_project 2 92236593 92239117 + Lrp4 protein_coding processed_transcript MGP_WSBEiJ_T0099334.1 MGP_WSBEiJ_G0037997.1 mouse_genomes_project 2 24490505 24490632 - Snora43 snoRNA snoRNA MGP_WSBEiJ_T0055770.1 MGP_WSBEiJ_G0025570.1 mouse_genomes_project 2 120677779 120682640 - MGP_WSBEiJ_P0055770 Ankrd63 protein_coding protein_coding MGP_WSBEiJ_T0010168.1 MGP_WSBEiJ_G0008325.1 mouse_genomes_project 2 7775817 7775901 + Mir466m miRNA miRNA MGP_WSBEiJ_T0096813.1 MGP_WSBEiJ_G0035494.1 mouse_genomes_project 2 92708487 92708888 - pseudogene pseudogene MGP_WSBEiJ_T0007183.1 MGP_WSBEiJ_G0005893.1 mouse_genomes_project 2 110573222 110575966 + Gm13923 lincRNA lincRNA MGP_WSBEiJ_T0017330.1 MGP_WSBEiJ_G0014916.1 mouse_genomes_project 2 177227976 177245411 - Gm14455 processed_transcript processed_transcript MGP_WSBEiJ_T0055589.1 MGP_WSBEiJ_G0025499.1 mouse_genomes_project 2 112245620 112565032 - MGP_WSBEiJ_P0055589 Ano3 protein_coding protein_coding MGP_WSBEiJ_T0055590.1 MGP_WSBEiJ_G0025499.1 mouse_genomes_project 2 112282885 112564481 - Ano3 protein_coding retained_intron MGP_WSBEiJ_T0055591.1 MGP_WSBEiJ_G0025499.1 mouse_genomes_project 2 112310237 112360822 - MGP_WSBEiJ_P0055591 Ano3 protein_coding protein_coding MGP_WSBEiJ_T0013183.1 MGP_WSBEiJ_G0011313.1 mouse_genomes_project 2 49554877 49555289 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058506.1 MGP_WSBEiJ_G0026206.1 mouse_genomes_project 2 178411266 178418252 + MGP_WSBEiJ_P0058506 1700021F07Rik protein_coding protein_coding MGP_WSBEiJ_T0057260.1 MGP_WSBEiJ_G0025919.1 mouse_genomes_project 2 156088937 156095143 - Defb45 protein_coding processed_transcript MGP_WSBEiJ_T0057261.1 MGP_WSBEiJ_G0025919.1 mouse_genomes_project 2 156088937 156092226 - MGP_WSBEiJ_P0057261 Defb45 protein_coding protein_coding MGP_WSBEiJ_T0001021.1 MGP_WSBEiJ_G0000956.1 mouse_genomes_project 2 12461355 12462686 + TEC TEC MGP_WSBEiJ_T0058048.1 MGP_WSBEiJ_G0026091.1 mouse_genomes_project 2 168367068 168370974 - MGP_WSBEiJ_P0058048 Svs3a protein_coding protein_coding MGP_WSBEiJ_T0057978.1 MGP_WSBEiJ_G0026066.1 mouse_genomes_project 2 167142895 167143717 - MGP_WSBEiJ_P0057978 Gtsf1l protein_coding protein_coding MGP_WSBEiJ_T0004056.1 MGP_WSBEiJ_G0003591.1 mouse_genomes_project 2 159537044 159538208 + Gm16098 antisense antisense MGP_WSBEiJ_T0058389.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172662790 172684192 - MGP_WSBEiJ_P0058389 protein_coding protein_coding MGP_WSBEiJ_T0058390.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172664023 172672046 - protein_coding retained_intron MGP_WSBEiJ_T0058391.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172664023 172684404 - MGP_WSBEiJ_P0058391 protein_coding protein_coding MGP_WSBEiJ_T0058392.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172664024 172670319 - protein_coding retained_intron MGP_WSBEiJ_T0058393.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172664258 172666993 - protein_coding retained_intron MGP_WSBEiJ_T0058394.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172664284 172684141 - MGP_WSBEiJ_P0058394 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058395.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172664330 172677137 - protein_coding retained_intron MGP_WSBEiJ_T0058396.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172665126 172683889 - protein_coding processed_transcript MGP_WSBEiJ_T0058397.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172671958 172684043 - protein_coding retained_intron MGP_WSBEiJ_T0058398.1 MGP_WSBEiJ_G0026173.1 mouse_genomes_project 2 172673780 172684175 - protein_coding retained_intron MGP_WSBEiJ_T0010231.1 MGP_WSBEiJ_G0008388.1 mouse_genomes_project 2 28837599 28837683 + Mir3089 miRNA miRNA MGP_WSBEiJ_T0010297.1 MGP_WSBEiJ_G0008454.1 mouse_genomes_project 2 151345705 151345784 + Gm27420 miRNA miRNA MGP_WSBEiJ_T0054802.1 MGP_WSBEiJ_G0025290.1 mouse_genomes_project 2 88566427 88567360 + MGP_WSBEiJ_P0054802 Olfr1152 protein_coding protein_coding MGP_WSBEiJ_T0054662.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85463422 85473294 + MGP_WSBEiJ_P0054662 Ssrp1 protein_coding protein_coding MGP_WSBEiJ_T0054663.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85463639 85473291 + MGP_WSBEiJ_P0054663 Ssrp1 protein_coding protein_coding MGP_WSBEiJ_T0054664.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85463641 85465460 + Ssrp1 protein_coding processed_transcript MGP_WSBEiJ_T0054665.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85463643 85471957 + MGP_WSBEiJ_P0054665 Ssrp1 protein_coding protein_coding MGP_WSBEiJ_T0054666.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85463721 85466644 + Ssrp1 protein_coding processed_transcript MGP_WSBEiJ_T0054667.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85466300 85467211 + Ssrp1 protein_coding processed_transcript MGP_WSBEiJ_T0054668.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85467362 85468498 + Ssrp1 protein_coding processed_transcript MGP_WSBEiJ_T0054669.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85471435 85472903 + Ssrp1 protein_coding processed_transcript MGP_WSBEiJ_T0054670.1 MGP_WSBEiJ_G0025181.1 mouse_genomes_project 2 85471539 85472470 + Ssrp1 protein_coding processed_transcript MGP_WSBEiJ_T0098127.1 MGP_WSBEiJ_G0036790.1 mouse_genomes_project 2 136073970 136074029 + Gm27449 snRNA snRNA MGP_WSBEiJ_T0007186.1 MGP_WSBEiJ_G0005896.1 mouse_genomes_project 2 116635312 116855826 + lincRNA lincRNA MGP_WSBEiJ_T0051990.1 MGP_WSBEiJ_G0024686.1 mouse_genomes_project 2 22820310 22829789 - MGP_WSBEiJ_P0051990 Noxa1 protein_coding protein_coding MGP_WSBEiJ_T0051991.1 MGP_WSBEiJ_G0024686.1 mouse_genomes_project 2 22820310 22829771 - MGP_WSBEiJ_P0051991 Noxa1 protein_coding protein_coding MGP_WSBEiJ_T0054704.1 MGP_WSBEiJ_G0025205.1 mouse_genomes_project 2 86370235 86371171 + MGP_WSBEiJ_P0054704 Olfr1023 protein_coding protein_coding MGP_WSBEiJ_T0098144.1 MGP_WSBEiJ_G0036807.1 mouse_genomes_project 2 186892540 186892647 + Gm25879 snRNA snRNA MGP_WSBEiJ_T0053466.1 MGP_WSBEiJ_G0024950.1 mouse_genomes_project 2 35525940 35526909 - MGP_WSBEiJ_P0053466 Olfr361 protein_coding protein_coding MGP_WSBEiJ_T0010247.1 MGP_WSBEiJ_G0008404.1 mouse_genomes_project 2 37342995 37343084 + Mir181b-2 miRNA miRNA MGP_WSBEiJ_T0013351.1 MGP_WSBEiJ_G0011481.1 mouse_genomes_project 2 110102198 110102458 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0055684.1 MGP_WSBEiJ_G0025553.1 mouse_genomes_project 2 115846659 115923236 - MGP_WSBEiJ_P0055684 Aqr protein_coding protein_coding MGP_WSBEiJ_T0055685.1 MGP_WSBEiJ_G0025553.1 mouse_genomes_project 2 115850649 115923174 - MGP_WSBEiJ_P0055685 Aqr protein_coding protein_coding MGP_WSBEiJ_T0055686.1 MGP_WSBEiJ_G0025553.1 mouse_genomes_project 2 115857611 115864672 - Aqr protein_coding processed_transcript MGP_WSBEiJ_T0055687.1 MGP_WSBEiJ_G0025553.1 mouse_genomes_project 2 115879264 115888328 - Aqr protein_coding processed_transcript MGP_WSBEiJ_T0055688.1 MGP_WSBEiJ_G0025553.1 mouse_genomes_project 2 115879645 115923143 - Aqr protein_coding processed_transcript MGP_WSBEiJ_T0055689.1 MGP_WSBEiJ_G0025553.1 mouse_genomes_project 2 115899681 115923235 - Aqr protein_coding processed_transcript MGP_WSBEiJ_T0055690.1 MGP_WSBEiJ_G0025553.1 mouse_genomes_project 2 115905441 115923235 - Aqr protein_coding processed_transcript MGP_WSBEiJ_T0055691.1 MGP_WSBEiJ_G0025553.1 mouse_genomes_project 2 115916872 115923313 - Aqr protein_coding processed_transcript MGP_WSBEiJ_T0056802.1 MGP_WSBEiJ_G0025793.1 mouse_genomes_project 2 134931990 134942036 - MGP_WSBEiJ_P0056802 Tmem230 protein_coding protein_coding MGP_WSBEiJ_T0056803.1 MGP_WSBEiJ_G0025793.1 mouse_genomes_project 2 134931990 134941998 - MGP_WSBEiJ_P0056803 Tmem230 protein_coding protein_coding MGP_WSBEiJ_T0056804.1 MGP_WSBEiJ_G0025793.1 mouse_genomes_project 2 134931990 134941883 - MGP_WSBEiJ_P0056804 Tmem230 protein_coding protein_coding MGP_WSBEiJ_T0056805.1 MGP_WSBEiJ_G0025793.1 mouse_genomes_project 2 134931992 134942017 - MGP_WSBEiJ_P0056805 Tmem230 protein_coding protein_coding MGP_WSBEiJ_T0056806.1 MGP_WSBEiJ_G0025793.1 mouse_genomes_project 2 134939548 134941988 - Tmem230 protein_coding processed_transcript MGP_WSBEiJ_T0056807.1 MGP_WSBEiJ_G0025793.1 mouse_genomes_project 2 134940080 134941985 - Tmem230 protein_coding retained_intron MGP_WSBEiJ_T0058189.1 MGP_WSBEiJ_G0026135.1 mouse_genomes_project 2 169260238 169271635 + MGP_WSBEiJ_P0058189 Cd40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058190.1 MGP_WSBEiJ_G0026135.1 mouse_genomes_project 2 169260238 169283775 + MGP_WSBEiJ_P0058190 Cd40 protein_coding protein_coding MGP_WSBEiJ_T0058191.1 MGP_WSBEiJ_G0026135.1 mouse_genomes_project 2 169260247 169282480 + MGP_WSBEiJ_P0058191 Cd40 protein_coding protein_coding MGP_WSBEiJ_T0058192.1 MGP_WSBEiJ_G0026135.1 mouse_genomes_project 2 169260291 169281571 + MGP_WSBEiJ_P0058192 Cd40 protein_coding protein_coding MGP_WSBEiJ_T0058193.1 MGP_WSBEiJ_G0026135.1 mouse_genomes_project 2 169260292 169271692 + MGP_WSBEiJ_P0058193 Cd40 protein_coding protein_coding MGP_WSBEiJ_T0058194.1 MGP_WSBEiJ_G0026135.1 mouse_genomes_project 2 169260315 169281826 + MGP_WSBEiJ_P0058194 Cd40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058195.1 MGP_WSBEiJ_G0026135.1 mouse_genomes_project 2 169271587 169275611 + Cd40 protein_coding retained_intron MGP_WSBEiJ_T0055341.1 MGP_WSBEiJ_G0025448.1 mouse_genomes_project 2 103543391 103645752 - MGP_WSBEiJ_P0055341 Trim44 protein_coding protein_coding MGP_WSBEiJ_T0055342.1 MGP_WSBEiJ_G0025448.1 mouse_genomes_project 2 103547768 103645109 - MGP_WSBEiJ_P0055342 Trim44 protein_coding protein_coding MGP_WSBEiJ_T0055343.1 MGP_WSBEiJ_G0025448.1 mouse_genomes_project 2 103602958 103652680 - MGP_WSBEiJ_P0055343 Trim44 protein_coding protein_coding MGP_WSBEiJ_T0007292.1 MGP_WSBEiJ_G0005982.1 mouse_genomes_project 2 172288419 172292360 + Gm14319 lincRNA lincRNA MGP_WSBEiJ_T0056450.1 MGP_WSBEiJ_G0025710.1 mouse_genomes_project 2 129822800 129825018 + MGP_WSBEiJ_P0056450 Dusp2 protein_coding protein_coding MGP_WSBEiJ_T0056451.1 MGP_WSBEiJ_G0025710.1 mouse_genomes_project 2 129823251 129824146 + Dusp2 protein_coding retained_intron MGP_WSBEiJ_T0097023.1 MGP_WSBEiJ_G0035704.1 mouse_genomes_project 2 74845794 74845894 - n-R5s198 rRNA rRNA MGP_WSBEiJ_T0052223.1 MGP_WSBEiJ_G0024736.1 mouse_genomes_project 2 23559281 23562557 + MGP_WSBEiJ_P0052223 Lcn11 protein_coding protein_coding MGP_WSBEiJ_T0056818.1 MGP_WSBEiJ_G0025796.1 mouse_genomes_project 2 135037942 135085712 - MGP_WSBEiJ_P0056818 Prokr2 protein_coding protein_coding MGP_WSBEiJ_T0056819.1 MGP_WSBEiJ_G0025796.1 mouse_genomes_project 2 135070622 135085710 - MGP_WSBEiJ_P0056819 Prokr2 protein_coding protein_coding MGP_WSBEiJ_T0056820.1 MGP_WSBEiJ_G0025796.1 mouse_genomes_project 2 135070622 135085685 - MGP_WSBEiJ_P0056820 Prokr2 protein_coding protein_coding MGP_WSBEiJ_T0056821.1 MGP_WSBEiJ_G0025796.1 mouse_genomes_project 2 135071454 135085732 - MGP_WSBEiJ_P0056821 Prokr2 protein_coding protein_coding MGP_WSBEiJ_T0056822.1 MGP_WSBEiJ_G0025796.1 mouse_genomes_project 2 135081862 135085706 - MGP_WSBEiJ_P0056822 Prokr2 protein_coding protein_coding MGP_WSBEiJ_T0054884.1 MGP_WSBEiJ_G0025359.1 mouse_genomes_project 2 90499682 90500503 - MGP_WSBEiJ_P0054884 protein_coding protein_coding MGP_WSBEiJ_T0055270.1 MGP_WSBEiJ_G0025433.1 mouse_genomes_project 2 94753644 94767424 - MGP_WSBEiJ_P0055270 Accsl protein_coding protein_coding MGP_WSBEiJ_T0055271.1 MGP_WSBEiJ_G0025433.1 mouse_genomes_project 2 94753645 94755303 - MGP_WSBEiJ_P0055271 Accsl protein_coding protein_coding MGP_WSBEiJ_T0055272.1 MGP_WSBEiJ_G0025433.1 mouse_genomes_project 2 94753650 94755016 - Accsl protein_coding processed_transcript MGP_WSBEiJ_T0055273.1 MGP_WSBEiJ_G0025433.1 mouse_genomes_project 2 94759346 94763099 - Accsl protein_coding processed_transcript MGP_WSBEiJ_T0055274.1 MGP_WSBEiJ_G0025433.1 mouse_genomes_project 2 94760060 94767424 - Accsl protein_coding processed_transcript MGP_WSBEiJ_T0055275.1 MGP_WSBEiJ_G0025433.1 mouse_genomes_project 2 94764157 94767339 - MGP_WSBEiJ_P0055275 Accsl protein_coding protein_coding MGP_WSBEiJ_T0055276.1 MGP_WSBEiJ_G0025433.1 mouse_genomes_project 2 94764157 94767349 - MGP_WSBEiJ_P0055276 Accsl protein_coding protein_coding MGP_WSBEiJ_T0055277.1 MGP_WSBEiJ_G0025433.1 mouse_genomes_project 2 94764309 94766960 - Accsl protein_coding processed_transcript MGP_WSBEiJ_T0017228.1 MGP_WSBEiJ_G0014870.1 mouse_genomes_project 2 105110674 105116579 - 4930547E08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0054832.1 MGP_WSBEiJ_G0025318.1 mouse_genomes_project 2 89525417 89526344 - MGP_WSBEiJ_P0054832 Olfr1198 protein_coding protein_coding MGP_WSBEiJ_T0056786.1 MGP_WSBEiJ_G0025790.1 mouse_genomes_project 2 134634604 134639589 + MGP_WSBEiJ_P0056786 protein_coding protein_coding MGP_WSBEiJ_T0056787.1 MGP_WSBEiJ_G0025790.1 mouse_genomes_project 2 134634605 134639589 + MGP_WSBEiJ_P0056787 protein_coding protein_coding MGP_WSBEiJ_T0056788.1 MGP_WSBEiJ_G0025790.1 mouse_genomes_project 2 134634605 134639589 + MGP_WSBEiJ_P0056788 protein_coding protein_coding MGP_WSBEiJ_T0056789.1 MGP_WSBEiJ_G0025790.1 mouse_genomes_project 2 134634780 134639589 + MGP_WSBEiJ_P0056789 protein_coding protein_coding MGP_WSBEiJ_T0013487.1 MGP_WSBEiJ_G0011617.1 mouse_genomes_project 2 167030065 167033639 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051871.1 MGP_WSBEiJ_G0024672.1 mouse_genomes_project 2 21947093 21950988 + MGP_WSBEiJ_P0051871 Il1f5 protein_coding protein_coding MGP_WSBEiJ_T0051872.1 MGP_WSBEiJ_G0024672.1 mouse_genomes_project 2 21947350 21949158 + Il1f5 protein_coding retained_intron MGP_WSBEiJ_T0051873.1 MGP_WSBEiJ_G0024672.1 mouse_genomes_project 2 21947361 21951709 + Il1f5 protein_coding processed_transcript MGP_WSBEiJ_T0051874.1 MGP_WSBEiJ_G0024672.1 mouse_genomes_project 2 21947578 21951452 + MGP_WSBEiJ_P0051874 Il1f5 protein_coding protein_coding MGP_WSBEiJ_T0058399.1 MGP_WSBEiJ_G0026174.1 mouse_genomes_project 2 172684434 172687819 + MGP_WSBEiJ_P0058399 Mocs3 protein_coding protein_coding MGP_WSBEiJ_T0007165.1 MGP_WSBEiJ_G0005878.1 mouse_genomes_project 2 96727280 96729791 + Gm13799 lincRNA lincRNA MGP_WSBEiJ_T0058075.1 MGP_WSBEiJ_G0026102.1 mouse_genomes_project 2 168603275 168606676 - MGP_WSBEiJ_P0058075 Trp53tg5 protein_coding protein_coding MGP_WSBEiJ_T0056975.1 MGP_WSBEiJ_G0025834.1 mouse_genomes_project 2 147424737 147445481 - MGP_WSBEiJ_P0056975 Snx5 protein_coding protein_coding MGP_WSBEiJ_T0056976.1 MGP_WSBEiJ_G0025834.1 mouse_genomes_project 2 147424737 147445147 - MGP_WSBEiJ_P0056976 Snx5 protein_coding protein_coding MGP_WSBEiJ_T0056977.1 MGP_WSBEiJ_G0025834.1 mouse_genomes_project 2 147425678 147428240 - Snx5 protein_coding processed_transcript MGP_WSBEiJ_T0056978.1 MGP_WSBEiJ_G0025834.1 mouse_genomes_project 2 147425730 147427212 - Snx5 protein_coding processed_transcript MGP_WSBEiJ_T0056979.1 MGP_WSBEiJ_G0025834.1 mouse_genomes_project 2 147428259 147429938 - Snx5 protein_coding processed_transcript MGP_WSBEiJ_T0056980.1 MGP_WSBEiJ_G0025834.1 mouse_genomes_project 2 147429225 147429917 - Snx5 protein_coding processed_transcript MGP_WSBEiJ_T0056981.1 MGP_WSBEiJ_G0025834.1 mouse_genomes_project 2 147429328 147435313 - Snx5 protein_coding processed_transcript MGP_WSBEiJ_T0056982.1 MGP_WSBEiJ_G0025834.1 mouse_genomes_project 2 147444018 147445359 - Snx5 protein_coding processed_transcript MGP_WSBEiJ_T0057738.1 MGP_WSBEiJ_G0026017.1 mouse_genomes_project 2 160594218 160609728 + MGP_WSBEiJ_P0057738 Tgif2 protein_coding protein_coding MGP_WSBEiJ_T0057739.1 MGP_WSBEiJ_G0026017.1 mouse_genomes_project 2 160595231 160601882 + MGP_WSBEiJ_P0057739 Tgif2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057740.1 MGP_WSBEiJ_G0026017.1 mouse_genomes_project 2 160604163 160607396 + Tgif2 protein_coding processed_transcript MGP_WSBEiJ_T0057741.1 MGP_WSBEiJ_G0026017.1 mouse_genomes_project 2 160605043 160607750 + Tgif2 protein_coding processed_transcript MGP_WSBEiJ_T0058807.1 MGP_WSBEiJ_G0026272.1 mouse_genomes_project 2 186708555 186710330 + MGP_WSBEiJ_P0058807 Abhd16b protein_coding protein_coding MGP_WSBEiJ_T0011303.1 MGP_WSBEiJ_G0009460.1 mouse_genomes_project 2 72127217 72127525 + Zakit misc_RNA misc_RNA MGP_WSBEiJ_T0055749.1 MGP_WSBEiJ_G0025566.1 mouse_genomes_project 2 120447437 120450562 - MGP_WSBEiJ_P0055749 Srp14 protein_coding protein_coding MGP_WSBEiJ_T0055750.1 MGP_WSBEiJ_G0025566.1 mouse_genomes_project 2 120447438 120449695 - Srp14 protein_coding processed_transcript MGP_WSBEiJ_T0055751.1 MGP_WSBEiJ_G0025566.1 mouse_genomes_project 2 120447448 120450499 - Srp14 protein_coding processed_transcript MGP_WSBEiJ_T0055752.1 MGP_WSBEiJ_G0025566.1 mouse_genomes_project 2 120449376 120450486 - MGP_WSBEiJ_P0055752 Srp14 protein_coding protein_coding MGP_WSBEiJ_T0057528.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159333983 159397649 - MGP_WSBEiJ_P0057528 Trpc4ap protein_coding protein_coding MGP_WSBEiJ_T0057529.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159334020 159397597 - MGP_WSBEiJ_P0057529 Trpc4ap protein_coding protein_coding MGP_WSBEiJ_T0057530.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159334457 159337455 - Trpc4ap protein_coding processed_transcript MGP_WSBEiJ_T0057531.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159335308 159337501 - Trpc4ap protein_coding retained_intron MGP_WSBEiJ_T0057532.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159338694 159374639 - Trpc4ap protein_coding retained_intron MGP_WSBEiJ_T0057533.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159338701 159340259 - Trpc4ap protein_coding retained_intron MGP_WSBEiJ_T0057534.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159343327 159364962 - Trpc4ap protein_coding retained_intron MGP_WSBEiJ_T0057535.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159353459 159397647 - Trpc4ap protein_coding retained_intron MGP_WSBEiJ_T0057536.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159367041 159369670 - Trpc4ap protein_coding retained_intron MGP_WSBEiJ_T0057537.1 MGP_WSBEiJ_G0025988.1 mouse_genomes_project 2 159374644 159397388 - Trpc4ap protein_coding processed_transcript MGP_WSBEiJ_T0013425.1 MGP_WSBEiJ_G0011555.1 mouse_genomes_project 2 147435784 147436092 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053195.1 MGP_WSBEiJ_G0024891.1 mouse_genomes_project 2 31171994 31222970 + MGP_WSBEiJ_P0053195 Fam129b protein_coding protein_coding MGP_WSBEiJ_T0053196.1 MGP_WSBEiJ_G0024891.1 mouse_genomes_project 2 31193440 31207611 + MGP_WSBEiJ_P0053196 Fam129b protein_coding protein_coding MGP_WSBEiJ_T0053197.1 MGP_WSBEiJ_G0024891.1 mouse_genomes_project 2 31208560 31210240 + Fam129b protein_coding retained_intron MGP_WSBEiJ_T0053198.1 MGP_WSBEiJ_G0024891.1 mouse_genomes_project 2 31212426 31218740 + Fam129b protein_coding processed_transcript MGP_WSBEiJ_T0053199.1 MGP_WSBEiJ_G0024891.1 mouse_genomes_project 2 31216356 31219823 + Fam129b protein_coding processed_transcript MGP_WSBEiJ_T0053200.1 MGP_WSBEiJ_G0024891.1 mouse_genomes_project 2 31219357 31221355 + Fam129b protein_coding processed_transcript MGP_WSBEiJ_T0007078.1 MGP_WSBEiJ_G0005807.1 mouse_genomes_project 2 34682645 34683371 + Gm13431 lincRNA lincRNA MGP_WSBEiJ_T0007079.1 MGP_WSBEiJ_G0005807.1 mouse_genomes_project 2 34682693 34689836 + Gm13431 lincRNA lincRNA MGP_WSBEiJ_T0007080.1 MGP_WSBEiJ_G0005807.1 mouse_genomes_project 2 34686349 34689768 + Gm13431 lincRNA lincRNA MGP_WSBEiJ_T0007259.1 MGP_WSBEiJ_G0005955.1 mouse_genomes_project 2 160587260 160594032 - Gm14230 lincRNA lincRNA MGP_WSBEiJ_T0007260.1 MGP_WSBEiJ_G0005955.1 mouse_genomes_project 2 160592033 160594104 - Gm14230 lincRNA lincRNA MGP_WSBEiJ_T0007261.1 MGP_WSBEiJ_G0005955.1 mouse_genomes_project 2 160592683 160594012 - Gm14230 lincRNA lincRNA MGP_WSBEiJ_T0017135.1 MGP_WSBEiJ_G0014812.1 mouse_genomes_project 2 1281791 1297544 - Gm13187 processed_transcript processed_transcript MGP_WSBEiJ_T0017136.1 MGP_WSBEiJ_G0014812.1 mouse_genomes_project 2 1285817 1297599 - Gm13187 processed_transcript processed_transcript MGP_WSBEiJ_T0017137.1 MGP_WSBEiJ_G0014812.1 mouse_genomes_project 2 1296954 1297599 - Gm13187 processed_transcript processed_transcript MGP_WSBEiJ_T0007138.1 MGP_WSBEiJ_G0005857.1 mouse_genomes_project 2 75675582 75676162 - Gm13656 lincRNA lincRNA MGP_WSBEiJ_T0007018.1 MGP_WSBEiJ_G0005762.1 mouse_genomes_project 2 1133562 1139919 + Gm13189 lincRNA lincRNA MGP_WSBEiJ_T0011292.1 MGP_WSBEiJ_G0009449.1 mouse_genomes_project 2 22302417 22302742 + Gm25455 misc_RNA misc_RNA MGP_WSBEiJ_T0013460.1 MGP_WSBEiJ_G0011590.1 mouse_genomes_project 2 159150587 159151978 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013334.1 MGP_WSBEiJ_G0011464.1 mouse_genomes_project 2 105146466 105146748 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013210.1 MGP_WSBEiJ_G0011340.1 mouse_genomes_project 2 58525166 58525596 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051937.1 MGP_WSBEiJ_G0024680.1 mouse_genomes_project 2 22672422 22684584 + MGP_WSBEiJ_P0051937 Zmynd19 protein_coding protein_coding MGP_WSBEiJ_T0054605.1 MGP_WSBEiJ_G0025164.1 mouse_genomes_project 2 85074642 85076198 - MGP_WSBEiJ_P0054605 2700094K13Rik protein_coding protein_coding MGP_WSBEiJ_T0054606.1 MGP_WSBEiJ_G0025164.1 mouse_genomes_project 2 85074648 85076136 - MGP_WSBEiJ_P0054606 2700094K13Rik protein_coding protein_coding MGP_WSBEiJ_T0054607.1 MGP_WSBEiJ_G0025164.1 mouse_genomes_project 2 85074734 85076104 - MGP_WSBEiJ_P0054607 2700094K13Rik protein_coding protein_coding MGP_WSBEiJ_T0054608.1 MGP_WSBEiJ_G0025164.1 mouse_genomes_project 2 85075122 85076125 - MGP_WSBEiJ_P0054608 2700094K13Rik protein_coding protein_coding MGP_WSBEiJ_T0054609.1 MGP_WSBEiJ_G0025164.1 mouse_genomes_project 2 85075377 85076104 - 2700094K13Rik protein_coding retained_intron MGP_WSBEiJ_T0054610.1 MGP_WSBEiJ_G0025164.1 mouse_genomes_project 2 85075444 85076082 - MGP_WSBEiJ_P0054610 2700094K13Rik protein_coding protein_coding MGP_WSBEiJ_T0017305.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162214464 162217606 - Snhg17 processed_transcript lincRNA MGP_WSBEiJ_T0017306.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162216072 162222327 - Snhg17 processed_transcript lincRNA MGP_WSBEiJ_T0017307.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162216530 162222336 - Snhg17 processed_transcript lincRNA MGP_WSBEiJ_T0017308.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162216530 162222397 - Snhg17 processed_transcript lincRNA MGP_WSBEiJ_T0017309.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162216530 162222339 - Snhg17 processed_transcript retained_intron MGP_WSBEiJ_T0017310.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162216550 162222330 - Snhg17 processed_transcript retained_intron MGP_WSBEiJ_T0017311.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162216786 162219281 - Snhg17 processed_transcript lincRNA MGP_WSBEiJ_T0017312.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162220055 162222292 - Snhg17 processed_transcript lincRNA MGP_WSBEiJ_T0017313.1 MGP_WSBEiJ_G0014906.1 mouse_genomes_project 2 162221685 162222359 - Snhg17 processed_transcript lincRNA MGP_WSBEiJ_T0100717.1 MGP_WSBEiJ_G0039175.1 mouse_genomes_project 2 87606144 87607083 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099372.1 MGP_WSBEiJ_G0038035.1 mouse_genomes_project 2 105573828 105573958 - Gm22501 snoRNA snoRNA MGP_WSBEiJ_T0054749.1 MGP_WSBEiJ_G0025248.1 mouse_genomes_project 2 87438842 87440088 - MGP_WSBEiJ_P0054749 protein_coding protein_coding MGP_WSBEiJ_T0057614.1 MGP_WSBEiJ_G0026003.1 mouse_genomes_project 2 159786561 159790838 + Spag4 protein_coding retained_intron MGP_WSBEiJ_T0057615.1 MGP_WSBEiJ_G0026003.1 mouse_genomes_project 2 159786584 159791968 + Spag4 protein_coding retained_intron MGP_WSBEiJ_T0057616.1 MGP_WSBEiJ_G0026003.1 mouse_genomes_project 2 159786613 159790561 + Spag4 protein_coding retained_intron MGP_WSBEiJ_T0057617.1 MGP_WSBEiJ_G0026003.1 mouse_genomes_project 2 159786630 159790838 + MGP_WSBEiJ_P0057617 Spag4 protein_coding protein_coding MGP_WSBEiJ_T0057618.1 MGP_WSBEiJ_G0026003.1 mouse_genomes_project 2 159786823 159788662 + MGP_WSBEiJ_P0057618 Spag4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057619.1 MGP_WSBEiJ_G0026003.1 mouse_genomes_project 2 159786939 159788869 + MGP_WSBEiJ_P0057619 Spag4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0057620.1 MGP_WSBEiJ_G0026003.1 mouse_genomes_project 2 159787128 159789377 + MGP_WSBEiJ_P0057620 Spag4 protein_coding protein_coding MGP_WSBEiJ_T0057621.1 MGP_WSBEiJ_G0026003.1 mouse_genomes_project 2 159788121 159790715 + Spag4 protein_coding processed_transcript MGP_WSBEiJ_T0013279.1 MGP_WSBEiJ_G0011409.1 mouse_genomes_project 2 84124203 84125455 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053448.1 MGP_WSBEiJ_G0024934.1 mouse_genomes_project 2 35087163 35088099 + MGP_WSBEiJ_P0053448 Olfr345 protein_coding protein_coding MGP_WSBEiJ_T0053451.1 MGP_WSBEiJ_G0024937.1 mouse_genomes_project 2 35218654 35221671 + MGP_WSBEiJ_P0053451 Olfr348 protein_coding protein_coding MGP_WSBEiJ_T0053452.1 MGP_WSBEiJ_G0024937.1 mouse_genomes_project 2 35220729 35221671 + MGP_WSBEiJ_P0053452 Olfr348 protein_coding protein_coding MGP_WSBEiJ_T0051489.1 MGP_WSBEiJ_G0024608.1 mouse_genomes_project 2 8490545 8625040 + MGP_WSBEiJ_P0051489 Prkcq protein_coding protein_coding MGP_WSBEiJ_T0051490.1 MGP_WSBEiJ_G0024608.1 mouse_genomes_project 2 8490549 8586671 + Prkcq protein_coding retained_intron MGP_WSBEiJ_T0051491.1 MGP_WSBEiJ_G0024608.1 mouse_genomes_project 2 8490747 8608189 + Prkcq protein_coding retained_intron MGP_WSBEiJ_T0051492.1 MGP_WSBEiJ_G0024608.1 mouse_genomes_project 2 8547492 8623938 + MGP_WSBEiJ_P0051492 Prkcq protein_coding protein_coding MGP_WSBEiJ_T0051493.1 MGP_WSBEiJ_G0024608.1 mouse_genomes_project 2 8568190 8574647 + Prkcq protein_coding retained_intron MGP_WSBEiJ_T0051494.1 MGP_WSBEiJ_G0024608.1 mouse_genomes_project 2 8570855 8624517 + Prkcq protein_coding processed_transcript MGP_WSBEiJ_T0052832.1 MGP_WSBEiJ_G0024835.1 mouse_genomes_project 2 28545697 28548372 - MGP_WSBEiJ_P0052832 Ier5l protein_coding protein_coding MGP_WSBEiJ_T0054122.1 MGP_WSBEiJ_G0025069.1 mouse_genomes_project 2 69420625 69428770 + MGP_WSBEiJ_P0054122 Phospho2 protein_coding protein_coding MGP_WSBEiJ_T0054123.1 MGP_WSBEiJ_G0025069.1 mouse_genomes_project 2 69420638 69430340 + MGP_WSBEiJ_P0054123 Phospho2 protein_coding protein_coding MGP_WSBEiJ_T0054124.1 MGP_WSBEiJ_G0025069.1 mouse_genomes_project 2 69420652 69430340 + MGP_WSBEiJ_P0054124 Phospho2 protein_coding protein_coding MGP_WSBEiJ_T0054125.1 MGP_WSBEiJ_G0025069.1 mouse_genomes_project 2 69420662 69424678 + Phospho2 protein_coding processed_transcript MGP_WSBEiJ_T0054126.1 MGP_WSBEiJ_G0025069.1 mouse_genomes_project 2 69420714 69434034 + Phospho2 protein_coding processed_transcript MGP_WSBEiJ_T0054127.1 MGP_WSBEiJ_G0025069.1 mouse_genomes_project 2 69423177 69430339 + MGP_WSBEiJ_P0054127 Phospho2 protein_coding protein_coding MGP_WSBEiJ_T0099335.1 MGP_WSBEiJ_G0037998.1 mouse_genomes_project 2 24491847 24491979 - Snora17 snoRNA snoRNA MGP_WSBEiJ_T0054880.1 MGP_WSBEiJ_G0025357.1 mouse_genomes_project 2 90418834 90419779 - MGP_WSBEiJ_P0054880 Olfr1247 protein_coding protein_coding MGP_WSBEiJ_T0054881.1 MGP_WSBEiJ_G0025357.1 mouse_genomes_project 2 90418834 90424303 - MGP_WSBEiJ_P0054881 Olfr1247 protein_coding protein_coding MGP_WSBEiJ_T0054882.1 MGP_WSBEiJ_G0025357.1 mouse_genomes_project 2 90419535 90421378 - MGP_WSBEiJ_P0054882 Olfr1247 protein_coding protein_coding MGP_WSBEiJ_T0010250.1 MGP_WSBEiJ_G0008407.1 mouse_genomes_project 2 51246013 51246163 + Gm22095 miRNA miRNA MGP_WSBEiJ_T0099392.1 MGP_WSBEiJ_G0038055.1 mouse_genomes_project 2 151936741 151936853 + Gm25866 snoRNA snoRNA MGP_WSBEiJ_T0057107.1 MGP_WSBEiJ_G0025866.1 mouse_genomes_project 2 152066476 152071587 + MGP_WSBEiJ_P0057107 Cstl1 protein_coding protein_coding MGP_WSBEiJ_T0057108.1 MGP_WSBEiJ_G0025866.1 mouse_genomes_project 2 152066479 152071532 + MGP_WSBEiJ_P0057108 Cstl1 protein_coding protein_coding MGP_WSBEiJ_T0057109.1 MGP_WSBEiJ_G0025866.1 mouse_genomes_project 2 152066514 152071532 + MGP_WSBEiJ_P0057109 Cstl1 protein_coding protein_coding MGP_WSBEiJ_T0053446.1 MGP_WSBEiJ_G0024932.1 mouse_genomes_project 2 34981313 34982252 + MGP_WSBEiJ_P0053446 Olfr342 protein_coding protein_coding MGP_WSBEiJ_T0007048.1 MGP_WSBEiJ_G0005785.1 mouse_genomes_project 2 22241746 22265773 - Gm13417 lincRNA lincRNA MGP_WSBEiJ_T0055739.1 MGP_WSBEiJ_G0025563.1 mouse_genomes_project 2 120157822 120217016 - MGP_WSBEiJ_P0055739 Fsip1 protein_coding protein_coding MGP_WSBEiJ_T0055740.1 MGP_WSBEiJ_G0025563.1 mouse_genomes_project 2 120204666 120217006 - MGP_WSBEiJ_P0055740 Fsip1 protein_coding protein_coding MGP_WSBEiJ_T0052964.1 MGP_WSBEiJ_G0024855.1 mouse_genomes_project 2 30018967 30024838 - MGP_WSBEiJ_P0052964 Qrfp protein_coding protein_coding MGP_WSBEiJ_T0056487.1 MGP_WSBEiJ_G0025720.1 mouse_genomes_project 2 130204597 130234552 - MGP_WSBEiJ_P0056487 Mall protein_coding unknown_likely_coding MGP_WSBEiJ_T0010176.1 MGP_WSBEiJ_G0008333.1 mouse_genomes_project 2 7778127 7778225 + Mir669l miRNA miRNA MGP_WSBEiJ_T0013369.1 MGP_WSBEiJ_G0011499.1 mouse_genomes_project 2 119148230 119148789 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0056329.1 MGP_WSBEiJ_G0025684.1 mouse_genomes_project 2 127982058 128047751 - MGP_WSBEiJ_P0056329 Cep152 protein_coding protein_coding MGP_WSBEiJ_T0056330.1 MGP_WSBEiJ_G0025684.1 mouse_genomes_project 2 127982370 128047725 - MGP_WSBEiJ_P0056330 Cep152 protein_coding unknown_likely_coding MGP_WSBEiJ_T0013388.1 MGP_WSBEiJ_G0011518.1 mouse_genomes_project 2 131128002 131128276 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0052354.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24427750 24438223 + MGP_WSBEiJ_P0052354 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052355.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24428783 24441521 + MGP_WSBEiJ_P0052355 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052356.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24431588 24441518 + MGP_WSBEiJ_P0052356 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052357.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24431604 24441519 + MGP_WSBEiJ_P0052357 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052358.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24431629 24441957 + MGP_WSBEiJ_P0052358 Egfl7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052359.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24435474 24441518 + MGP_WSBEiJ_P0052359 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052361.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24435505 24439749 + Egfl7 protein_coding processed_transcript MGP_WSBEiJ_T0052362.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24435516 24439780 + MGP_WSBEiJ_P0052362 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052363.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24435533 24439328 + MGP_WSBEiJ_P0052363 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052364.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24437381 24441280 + MGP_WSBEiJ_P0052364 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052365.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24438173 24440404 + Egfl7 protein_coding retained_intron MGP_WSBEiJ_T0052366.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24439358 24439813 + Egfl7 protein_coding retained_intron MGP_WSBEiJ_T0052367.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24439805 24441513 + MGP_WSBEiJ_P0052367 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052368.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24439869 24441519 + MGP_WSBEiJ_P0052368 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052369.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24440274 24441519 + MGP_WSBEiJ_P0052369 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052370.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24440275 24441519 + MGP_WSBEiJ_P0052370 Egfl7 protein_coding protein_coding MGP_WSBEiJ_T0052371.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24440286 24441127 + Egfl7 protein_coding retained_intron MGP_WSBEiJ_T0052372.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24440859 24441518 + Egfl7 protein_coding processed_transcript MGP_WSBEiJ_T0052373.1 MGP_WSBEiJ_G0024757.1 mouse_genomes_project 2 24440983 24441519 + Egfl7 protein_coding retained_intron MGP_WSBEiJ_T0051675.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14892720 15286596 - MGP_WSBEiJ_P0051675 protein_coding protein_coding MGP_WSBEiJ_T0051676.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14892865 15018018 - MGP_WSBEiJ_P0051676 protein_coding protein_coding MGP_WSBEiJ_T0051677.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14897511 14911946 - protein_coding processed_transcript MGP_WSBEiJ_T0051678.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14897511 15017624 - MGP_WSBEiJ_P0051678 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051679.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14899572 15088057 - MGP_WSBEiJ_P0051679 protein_coding protein_coding MGP_WSBEiJ_T0051680.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14926882 14944094 - protein_coding processed_transcript MGP_WSBEiJ_T0051681.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14929889 14944137 - protein_coding processed_transcript MGP_WSBEiJ_T0051682.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14930146 14944163 - MGP_WSBEiJ_P0051682 protein_coding protein_coding MGP_WSBEiJ_T0051683.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14932866 14944124 - protein_coding processed_transcript MGP_WSBEiJ_T0051684.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14946057 15019862 - MGP_WSBEiJ_P0051684 protein_coding protein_coding MGP_WSBEiJ_T0051685.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14946060 15019864 - MGP_WSBEiJ_P0051685 protein_coding protein_coding MGP_WSBEiJ_T0051686.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14951075 15017707 - MGP_WSBEiJ_P0051686 protein_coding protein_coding MGP_WSBEiJ_T0051687.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 14988566 15086412 - protein_coding processed_transcript MGP_WSBEiJ_T0051688.1 MGP_WSBEiJ_G0024635.1 mouse_genomes_project 2 15282939 15287011 - protein_coding processed_transcript MGP_WSBEiJ_T0055648.1 MGP_WSBEiJ_G0025541.1 mouse_genomes_project 2 114089621 114117605 + Katnbl1 protein_coding retained_intron MGP_WSBEiJ_T0055649.1 MGP_WSBEiJ_G0025541.1 mouse_genomes_project 2 114089626 114124332 + MGP_WSBEiJ_P0055649 Katnbl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0013177.1 MGP_WSBEiJ_G0011307.1 mouse_genomes_project 2 47608402 47609373 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003912.1 MGP_WSBEiJ_G0003488.1 mouse_genomes_project 2 65371757 65382819 - Gm13617 antisense antisense MGP_WSBEiJ_T0013337.1 MGP_WSBEiJ_G0011467.1 mouse_genomes_project 2 105910772 105911795 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0057988.1 MGP_WSBEiJ_G0026070.1 mouse_genomes_project 2 167518461 167535303 + MGP_WSBEiJ_P0057988 Gdap1l1 protein_coding protein_coding MGP_WSBEiJ_T0057989.1 MGP_WSBEiJ_G0026070.1 mouse_genomes_project 2 167518463 167534954 + MGP_WSBEiJ_P0057989 Gdap1l1 protein_coding protein_coding MGP_WSBEiJ_T0057990.1 MGP_WSBEiJ_G0026070.1 mouse_genomes_project 2 167518463 167533932 + MGP_WSBEiJ_P0057990 Gdap1l1 protein_coding protein_coding MGP_WSBEiJ_T0057991.1 MGP_WSBEiJ_G0026070.1 mouse_genomes_project 2 167518514 167533777 + MGP_WSBEiJ_P0057991 Gdap1l1 protein_coding protein_coding MGP_WSBEiJ_T0055853.1 MGP_WSBEiJ_G0025591.1 mouse_genomes_project 2 121303716 121310469 + Vps18 protein_coding retained_intron MGP_WSBEiJ_T0055854.1 MGP_WSBEiJ_G0025591.1 mouse_genomes_project 2 121303718 121315004 + MGP_WSBEiJ_P0055854 Vps18 protein_coding protein_coding MGP_WSBEiJ_T0055855.1 MGP_WSBEiJ_G0025591.1 mouse_genomes_project 2 121303763 121314877 + Vps18 protein_coding processed_transcript MGP_WSBEiJ_T0098118.1 MGP_WSBEiJ_G0036781.1 mouse_genomes_project 2 119155303 119155467 + Gm25189 snRNA snRNA MGP_WSBEiJ_T0054515.1 MGP_WSBEiJ_G0025146.1 mouse_genomes_project 2 80596249 80605565 + Dnajc10 protein_coding processed_transcript MGP_WSBEiJ_T0054516.1 MGP_WSBEiJ_G0025146.1 mouse_genomes_project 2 80596249 80634783 + MGP_WSBEiJ_P0054516 Dnajc10 protein_coding protein_coding MGP_WSBEiJ_T0054517.1 MGP_WSBEiJ_G0025146.1 mouse_genomes_project 2 80612046 80614407 + Dnajc10 protein_coding processed_transcript MGP_WSBEiJ_T0054518.1 MGP_WSBEiJ_G0025146.1 mouse_genomes_project 2 80614306 80621581 + Dnajc10 protein_coding processed_transcript MGP_WSBEiJ_T0054519.1 MGP_WSBEiJ_G0025146.1 mouse_genomes_project 2 80628391 80631681 + Dnajc10 protein_coding processed_transcript MGP_WSBEiJ_T0004088.1 MGP_WSBEiJ_G0003615.1 mouse_genomes_project 2 171568447 171569671 + Gm14291 antisense antisense MGP_WSBEiJ_T0013103.1 MGP_WSBEiJ_G0011233.1 mouse_genomes_project 2 16231625 16231887 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004082.1 MGP_WSBEiJ_G0003610.1 mouse_genomes_project 2 169098841 169107447 + Zfp335os antisense antisense MGP_WSBEiJ_T0004083.1 MGP_WSBEiJ_G0003610.1 mouse_genomes_project 2 169101522 169107057 + Zfp335os antisense antisense MGP_WSBEiJ_T0052560.1 MGP_WSBEiJ_G0024798.1 mouse_genomes_project 2 26787734 26806705 - MGP_WSBEiJ_P0052560 Gtf3c4 protein_coding protein_coding MGP_WSBEiJ_T0052561.1 MGP_WSBEiJ_G0024798.1 mouse_genomes_project 2 26787740 26806631 - MGP_WSBEiJ_P0052561 Gtf3c4 protein_coding protein_coding MGP_WSBEiJ_T0052562.1 MGP_WSBEiJ_G0024798.1 mouse_genomes_project 2 26801548 26806631 - Gtf3c4 protein_coding processed_transcript MGP_WSBEiJ_T0052563.1 MGP_WSBEiJ_G0024798.1 mouse_genomes_project 2 26801648 26806697 - Gtf3c4 protein_coding processed_transcript MGP_WSBEiJ_T0007085.1 MGP_WSBEiJ_G0005812.1 mouse_genomes_project 2 44435580 44437386 + 1700019E08Rik lincRNA lincRNA MGP_WSBEiJ_T0007086.1 MGP_WSBEiJ_G0005812.1 mouse_genomes_project 2 44435775 44437005 + 1700019E08Rik lincRNA lincRNA MGP_WSBEiJ_T0052877.1 MGP_WSBEiJ_G0024843.1 mouse_genomes_project 2 29110671 29117978 - MGP_WSBEiJ_P0052877 Tor1a protein_coding protein_coding MGP_WSBEiJ_T0052878.1 MGP_WSBEiJ_G0024843.1 mouse_genomes_project 2 29110724 29117917 - Tor1a protein_coding retained_intron MGP_WSBEiJ_T0052879.1 MGP_WSBEiJ_G0024843.1 mouse_genomes_project 2 29111056 29113893 - Tor1a protein_coding retained_intron MGP_WSBEiJ_T0052880.1 MGP_WSBEiJ_G0024843.1 mouse_genomes_project 2 29111097 29113920 - Tor1a protein_coding retained_intron MGP_WSBEiJ_T0052881.1 MGP_WSBEiJ_G0024843.1 mouse_genomes_project 2 29116955 29117933 - Tor1a protein_coding retained_intron MGP_WSBEiJ_T0054356.1 MGP_WSBEiJ_G0025114.1 mouse_genomes_project 2 74590602 74594120 + MGP_WSBEiJ_P0054356 Hoxd8 protein_coding protein_coding MGP_WSBEiJ_T0054357.1 MGP_WSBEiJ_G0025114.1 mouse_genomes_project 2 74590892 74595241 + MGP_WSBEiJ_P0054357 Hoxd8 protein_coding protein_coding MGP_WSBEiJ_T0054358.1 MGP_WSBEiJ_G0025114.1 mouse_genomes_project 2 74591138 74594615 + MGP_WSBEiJ_P0054358 Hoxd8 protein_coding protein_coding MGP_WSBEiJ_T0013065.1 MGP_WSBEiJ_G0011195.1 mouse_genomes_project 2 1865702 1866179 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098095.1 MGP_WSBEiJ_G0036758.1 mouse_genomes_project 2 30861896 30862001 - Gm23369 snRNA snRNA MGP_WSBEiJ_T0007044.1 MGP_WSBEiJ_G0005782.1 mouse_genomes_project 2 18758606 18783745 + Gm13376 lincRNA lincRNA MGP_WSBEiJ_T0004009.1 MGP_WSBEiJ_G0003556.1 mouse_genomes_project 2 134834940 134911965 + Gm14051 antisense antisense MGP_WSBEiJ_T0055802.1 MGP_WSBEiJ_G0025577.1 mouse_genomes_project 2 120888660 120904716 + MGP_WSBEiJ_P0055802 Bahd1 protein_coding protein_coding MGP_WSBEiJ_T0055803.1 MGP_WSBEiJ_G0025577.1 mouse_genomes_project 2 120889736 120914283 + MGP_WSBEiJ_P0055803 Bahd1 protein_coding protein_coding MGP_WSBEiJ_T0100358.1 MGP_WSBEiJ_G0038835.1 mouse_genomes_project 2 107431703 107469097 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100359.1 MGP_WSBEiJ_G0038835.1 mouse_genomes_project 2 107466688 107838108 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0100360.1 MGP_WSBEiJ_G0038835.1 mouse_genomes_project 2 107670816 107838108 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100361.1 MGP_WSBEiJ_G0038835.1 mouse_genomes_project 2 107675140 107785822 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100362.1 MGP_WSBEiJ_G0038835.1 mouse_genomes_project 2 107836171 107856658 + unitary_pseudogene retained_intron MGP_WSBEiJ_T0100722.1 MGP_WSBEiJ_G0039180.1 mouse_genomes_project 2 88531240 88531687 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0058877.1 MGP_WSBEiJ_G0026282.1 mouse_genomes_project 2 186928267 186929917 - MGP_WSBEiJ_P0058877 Lkaaear1 protein_coding protein_coding MGP_WSBEiJ_T0058878.1 MGP_WSBEiJ_G0026282.1 mouse_genomes_project 2 186928270 186928891 - MGP_WSBEiJ_P0058878 Lkaaear1 protein_coding protein_coding MGP_WSBEiJ_T0054263.1 MGP_WSBEiJ_G0025093.1 mouse_genomes_project 2 72081893 72245590 + MGP_WSBEiJ_P0054263 Zak protein_coding protein_coding MGP_WSBEiJ_T0054264.1 MGP_WSBEiJ_G0025093.1 mouse_genomes_project 2 72081984 72210438 + MGP_WSBEiJ_P0054264 Zak protein_coding protein_coding MGP_WSBEiJ_T0054265.1 MGP_WSBEiJ_G0025093.1 mouse_genomes_project 2 72082020 72202172 + Zak protein_coding retained_intron MGP_WSBEiJ_T0054266.1 MGP_WSBEiJ_G0025093.1 mouse_genomes_project 2 72082033 72191518 + Zak protein_coding retained_intron MGP_WSBEiJ_T0054267.1 MGP_WSBEiJ_G0025093.1 mouse_genomes_project 2 72082050 72165174 + Zak protein_coding retained_intron MGP_WSBEiJ_T0054268.1 MGP_WSBEiJ_G0025093.1 mouse_genomes_project 2 72097477 72155953 + MGP_WSBEiJ_P0054268 Zak protein_coding protein_coding MGP_WSBEiJ_T0057178.1 MGP_WSBEiJ_G0025889.1 mouse_genomes_project 2 154464438 154474813 - MGP_WSBEiJ_P0057178 protein_coding protein_coding MGP_WSBEiJ_T0054728.1 MGP_WSBEiJ_G0025228.1 mouse_genomes_project 2 86878880 86879822 - MGP_WSBEiJ_P0054728 Olfr1056 protein_coding protein_coding MGP_WSBEiJ_T0053102.1 MGP_WSBEiJ_G0024874.1 mouse_genomes_project 2 30802765 30837147 + Fam102a protein_coding retained_intron MGP_WSBEiJ_T0053103.1 MGP_WSBEiJ_G0024874.1 mouse_genomes_project 2 30802766 30803624 + MGP_WSBEiJ_P0053103 Fam102a protein_coding protein_coding MGP_WSBEiJ_T0053104.1 MGP_WSBEiJ_G0024874.1 mouse_genomes_project 2 30802792 30837153 + MGP_WSBEiJ_P0053104 Fam102a protein_coding protein_coding MGP_WSBEiJ_T0053105.1 MGP_WSBEiJ_G0024874.1 mouse_genomes_project 2 30803166 30825534 + MGP_WSBEiJ_P0053105 Fam102a protein_coding protein_coding MGP_WSBEiJ_T0053106.1 MGP_WSBEiJ_G0024874.1 mouse_genomes_project 2 30807623 30827572 + Fam102a protein_coding processed_transcript MGP_WSBEiJ_T0017238.1 MGP_WSBEiJ_G0014873.1 mouse_genomes_project 2 111242688 111243616 + Gm20638 processed_transcript processed_transcript MGP_WSBEiJ_T0051361.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2034888 2059601 - MGP_WSBEiJ_P0051361 Mcm10 protein_coding protein_coding MGP_WSBEiJ_T0051362.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2035898 2042362 - Mcm10 protein_coding retained_intron MGP_WSBEiJ_T0051363.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2035898 2048043 - Mcm10 protein_coding retained_intron MGP_WSBEiJ_T0051364.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2035898 2060053 - MGP_WSBEiJ_P0051364 Mcm10 protein_coding protein_coding MGP_WSBEiJ_T0051365.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2036205 2039717 - Mcm10 protein_coding retained_intron MGP_WSBEiJ_T0051366.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2036434 2041306 - Mcm10 protein_coding retained_intron MGP_WSBEiJ_T0051367.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2045505 2051578 - Mcm10 protein_coding retained_intron MGP_WSBEiJ_T0051368.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2050520 2051798 - Mcm10 protein_coding retained_intron MGP_WSBEiJ_T0051369.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2052988 2060015 - Mcm10 protein_coding processed_transcript MGP_WSBEiJ_T0051370.1 MGP_WSBEiJ_G0024585.1 mouse_genomes_project 2 2053499 2059977 - Mcm10 protein_coding retained_intron MGP_WSBEiJ_T0013384.1 MGP_WSBEiJ_G0011514.1 mouse_genomes_project 2 130069317 130070167 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000992.1 MGP_WSBEiJ_G0000927.1 mouse_genomes_project 2 6884811 6885506 - TEC TEC MGP_WSBEiJ_T0099394.1 MGP_WSBEiJ_G0038057.1 mouse_genomes_project 2 154308831 154308975 + Gm23598 snoRNA snoRNA MGP_WSBEiJ_T0013400.1 MGP_WSBEiJ_G0011530.1 mouse_genomes_project 2 134595622 134596496 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0053718.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51034086 51088828 + MGP_WSBEiJ_P0053718 Rif1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0053719.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51034144 51084540 + MGP_WSBEiJ_P0053719 Rif1 protein_coding protein_coding MGP_WSBEiJ_T0053720.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51034149 51084542 + MGP_WSBEiJ_P0053720 Rif1 protein_coding protein_coding MGP_WSBEiJ_T0053721.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51034379 51037502 + Rif1 protein_coding processed_transcript MGP_WSBEiJ_T0053722.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51050843 51068322 + Rif1 protein_coding processed_transcript MGP_WSBEiJ_T0053723.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51054420 51059666 + Rif1 protein_coding processed_transcript MGP_WSBEiJ_T0053724.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51073211 51084214 + Rif1 protein_coding processed_transcript MGP_WSBEiJ_T0053725.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51073688 51084267 + Rif1 protein_coding processed_transcript MGP_WSBEiJ_T0053726.1 MGP_WSBEiJ_G0024996.1 mouse_genomes_project 2 51074360 51084540 + Rif1 protein_coding processed_transcript MGP_WSBEiJ_T0051460.1 MGP_WSBEiJ_G0024600.1 mouse_genomes_project 2 7161409 7164076 + MGP_WSBEiJ_P0051460 4930412O13Rik protein_coding protein_coding MGP_WSBEiJ_T0051461.1 MGP_WSBEiJ_G0024600.1 mouse_genomes_project 2 7162789 7163489 + MGP_WSBEiJ_P0051461 4930412O13Rik protein_coding protein_coding MGP_WSBEiJ_T0100056.1 MGP_WSBEiJ_G0038675.1 mouse_genomes_project 2 37663254 37668004 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100057.1 MGP_WSBEiJ_G0038675.1 mouse_genomes_project 2 37666985 37667758 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013208.1 MGP_WSBEiJ_G0011338.1 mouse_genomes_project 2 58104359 58105913 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017147.1 MGP_WSBEiJ_G0014818.1 mouse_genomes_project 2 16334887 16355698 - Gm20539 processed_transcript processed_transcript MGP_WSBEiJ_T0013080.1 MGP_WSBEiJ_G0011210.1 mouse_genomes_project 2 8415960 8420642 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013378.1 MGP_WSBEiJ_G0011508.1 mouse_genomes_project 2 123869499 123870459 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099375.1 MGP_WSBEiJ_G0038038.1 mouse_genomes_project 2 109565118 109565249 - Gm23749 snoRNA snoRNA MGP_WSBEiJ_T0056751.1 MGP_WSBEiJ_G0025783.1 mouse_genomes_project 2 133922392 133943287 + Pank2 protein_coding processed_transcript MGP_WSBEiJ_T0056752.1 MGP_WSBEiJ_G0025783.1 mouse_genomes_project 2 133922397 133959509 + MGP_WSBEiJ_P0056752 Pank2 protein_coding protein_coding MGP_WSBEiJ_T0056753.1 MGP_WSBEiJ_G0025783.1 mouse_genomes_project 2 133922422 133956351 + MGP_WSBEiJ_P0056753 Pank2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056754.1 MGP_WSBEiJ_G0025783.1 mouse_genomes_project 2 133922465 133959507 + MGP_WSBEiJ_P0056754 Pank2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056755.1 MGP_WSBEiJ_G0025783.1 mouse_genomes_project 2 133922693 133956194 + MGP_WSBEiJ_P0056755 Pank2 protein_coding protein_coding MGP_WSBEiJ_T0056756.1 MGP_WSBEiJ_G0025783.1 mouse_genomes_project 2 133922736 133956554 + Pank2 protein_coding processed_transcript MGP_WSBEiJ_T0056757.1 MGP_WSBEiJ_G0025783.1 mouse_genomes_project 2 133933936 133953249 + MGP_WSBEiJ_P0056757 Pank2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056758.1 MGP_WSBEiJ_G0025783.1 mouse_genomes_project 2 133934044 133956171 + MGP_WSBEiJ_P0056758 Pank2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055786.1 MGP_WSBEiJ_G0025575.1 mouse_genomes_project 2 120801143 120825189 + MGP_WSBEiJ_P0055786 Knstrn protein_coding protein_coding MGP_WSBEiJ_T0055787.1 MGP_WSBEiJ_G0025575.1 mouse_genomes_project 2 120801372 120821669 + MGP_WSBEiJ_P0055787 Knstrn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055788.1 MGP_WSBEiJ_G0025575.1 mouse_genomes_project 2 120801372 120821737 + MGP_WSBEiJ_P0055788 Knstrn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055789.1 MGP_WSBEiJ_G0025575.1 mouse_genomes_project 2 120801417 120818526 + MGP_WSBEiJ_P0055789 Knstrn protein_coding protein_coding MGP_WSBEiJ_T0055790.1 MGP_WSBEiJ_G0025575.1 mouse_genomes_project 2 120801436 120821556 + MGP_WSBEiJ_P0055790 Knstrn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055791.1 MGP_WSBEiJ_G0025575.1 mouse_genomes_project 2 120801566 120824708 + MGP_WSBEiJ_P0055791 Knstrn protein_coding protein_coding MGP_WSBEiJ_T0055792.1 MGP_WSBEiJ_G0025575.1 mouse_genomes_project 2 120819123 120824636 + MGP_WSBEiJ_P0055792 Knstrn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0055793.1 MGP_WSBEiJ_G0025575.1 mouse_genomes_project 2 120821562 120843190 + MGP_WSBEiJ_P0055793 Knstrn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0052538.1 MGP_WSBEiJ_G0024794.1 mouse_genomes_project 2 26563439 26577427 - MGP_WSBEiJ_P0052538 Gfi1b protein_coding protein_coding MGP_WSBEiJ_T0052539.1 MGP_WSBEiJ_G0024794.1 mouse_genomes_project 2 26563444 26577390 - MGP_WSBEiJ_P0052539 Gfi1b protein_coding protein_coding MGP_WSBEiJ_T0052540.1 MGP_WSBEiJ_G0024794.1 mouse_genomes_project 2 26568775 26569397 - Gfi1b protein_coding processed_transcript MGP_WSBEiJ_T0052541.1 MGP_WSBEiJ_G0024794.1 mouse_genomes_project 2 26568782 26577427 - Gfi1b protein_coding processed_transcript MGP_WSBEiJ_T0004001.1 MGP_WSBEiJ_G0003550.1 mouse_genomes_project 2 131824936 131846444 + Gm14024 antisense antisense MGP_WSBEiJ_T0052489.1 MGP_WSBEiJ_G0024782.1 mouse_genomes_project 2 25581729 25651693 + MGP_WSBEiJ_P0052489 Rxra protein_coding protein_coding MGP_WSBEiJ_T0052490.1 MGP_WSBEiJ_G0024782.1 mouse_genomes_project 2 25619143 25670231 + MGP_WSBEiJ_P0052490 Rxra protein_coding protein_coding MGP_WSBEiJ_T0052491.1 MGP_WSBEiJ_G0024782.1 mouse_genomes_project 2 25620434 25670231 + MGP_WSBEiJ_P0052491 Rxra protein_coding protein_coding MGP_WSBEiJ_T0052492.1 MGP_WSBEiJ_G0024782.1 mouse_genomes_project 2 25647093 25673007 + MGP_WSBEiJ_P0052492 Rxra protein_coding protein_coding MGP_WSBEiJ_T0052493.1 MGP_WSBEiJ_G0024782.1 mouse_genomes_project 2 25647093 25671465 + MGP_WSBEiJ_P0052493 Rxra protein_coding protein_coding MGP_WSBEiJ_T0052494.1 MGP_WSBEiJ_G0024782.1 mouse_genomes_project 2 25649995 25658728 + Rxra protein_coding processed_transcript MGP_WSBEiJ_T0100709.1 MGP_WSBEiJ_G0039167.1 mouse_genomes_project 2 86791547 86792498 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0057380.1 MGP_WSBEiJ_G0025952.1 mouse_genomes_project 2 157537860 157543368 + Bpifb4 protein_coding retained_intron MGP_WSBEiJ_T0057381.1 MGP_WSBEiJ_G0025952.1 mouse_genomes_project 2 157537869 157564879 + MGP_WSBEiJ_P0057381 Bpifb4 protein_coding protein_coding MGP_WSBEiJ_T0057382.1 MGP_WSBEiJ_G0025952.1 mouse_genomes_project 2 157541628 157564642 + MGP_WSBEiJ_P0057382 Bpifb4 protein_coding protein_coding MGP_WSBEiJ_T0057383.1 MGP_WSBEiJ_G0025952.1 mouse_genomes_project 2 157543034 157545604 + Bpifb4 protein_coding retained_intron MGP_WSBEiJ_T0057384.1 MGP_WSBEiJ_G0025952.1 mouse_genomes_project 2 157544689 157564642 + MGP_WSBEiJ_P0057384 Bpifb4 protein_coding protein_coding MGP_WSBEiJ_T0007153.1 MGP_WSBEiJ_G0005870.1 mouse_genomes_project 2 92860473 92864854 - 2900072N19Rik lincRNA lincRNA MGP_WSBEiJ_T0013449.1 MGP_WSBEiJ_G0011579.1 mouse_genomes_project 2 154425125 154425907 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007266.1 MGP_WSBEiJ_G0005960.1 mouse_genomes_project 2 164899202 164900310 - Gm14228 lincRNA lincRNA MGP_WSBEiJ_T0058554.1 MGP_WSBEiJ_G0026219.1 mouse_genomes_project 2 179412950 179420719 - MGP_WSBEiJ_P0058554 Slmo2 protein_coding protein_coding MGP_WSBEiJ_T0058555.1 MGP_WSBEiJ_G0026219.1 mouse_genomes_project 2 179413558 179420790 - MGP_WSBEiJ_P0058555 Slmo2 protein_coding protein_coding MGP_WSBEiJ_T0058556.1 MGP_WSBEiJ_G0026219.1 mouse_genomes_project 2 179416961 179420747 - Slmo2 protein_coding retained_intron MGP_WSBEiJ_T0058557.1 MGP_WSBEiJ_G0026219.1 mouse_genomes_project 2 179417170 179420787 - MGP_WSBEiJ_P0058557 Slmo2 protein_coding protein_coding MGP_WSBEiJ_T0058510.1 MGP_WSBEiJ_G0026208.1 mouse_genomes_project 2 178549436 178599193 + MGP_WSBEiJ_P0058510 Rab22a protein_coding protein_coding MGP_WSBEiJ_T0058511.1 MGP_WSBEiJ_G0026208.1 mouse_genomes_project 2 178549436 178599165 + MGP_WSBEiJ_P0058511 Rab22a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058512.1 MGP_WSBEiJ_G0026208.1 mouse_genomes_project 2 178549532 178593000 + MGP_WSBEiJ_P0058512 Rab22a protein_coding protein_coding MGP_WSBEiJ_T0056986.1 MGP_WSBEiJ_G0025836.1 mouse_genomes_project 2 147483981 147511001 - MGP_WSBEiJ_P0056986 Ovol2 protein_coding protein_coding MGP_WSBEiJ_T0056987.1 MGP_WSBEiJ_G0025836.1 mouse_genomes_project 2 147483981 147511452 - MGP_WSBEiJ_P0056987 Ovol2 protein_coding protein_coding MGP_WSBEiJ_T0056988.1 MGP_WSBEiJ_G0025836.1 mouse_genomes_project 2 147497052 147510631 - Ovol2 protein_coding processed_transcript MGP_WSBEiJ_T0055345.1 MGP_WSBEiJ_G0025450.1 mouse_genomes_project 2 103810333 103906707 + MGP_WSBEiJ_P0055345 Pamr1 protein_coding protein_coding MGP_WSBEiJ_T0055346.1 MGP_WSBEiJ_G0025450.1 mouse_genomes_project 2 103810391 103818420 + Pamr1 protein_coding processed_transcript MGP_WSBEiJ_T0055347.1 MGP_WSBEiJ_G0025450.1 mouse_genomes_project 2 103810470 103899330 + Pamr1 protein_coding retained_intron MGP_WSBEiJ_T0055348.1 MGP_WSBEiJ_G0025450.1 mouse_genomes_project 2 103899707 103904377 + Pamr1 protein_coding retained_intron MGP_WSBEiJ_T0007108.1 MGP_WSBEiJ_G0005832.1 mouse_genomes_project 2 63733173 63744134 - Gm13575 lincRNA lincRNA MGP_WSBEiJ_T0013475.1 MGP_WSBEiJ_G0011605.1 mouse_genomes_project 2 160649868 160650105 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010248.1 MGP_WSBEiJ_G0008405.1 mouse_genomes_project 2 41006590 41006720 - Mir6336 miRNA miRNA MGP_WSBEiJ_T0001055.1 MGP_WSBEiJ_G0000990.1 mouse_genomes_project 2 70200744 70201470 - TEC TEC MGP_WSBEiJ_T0017168.1 MGP_WSBEiJ_G0014831.1 mouse_genomes_project 2 28829558 28836447 - Gm14488 processed_transcript processed_transcript MGP_WSBEiJ_T0017169.1 MGP_WSBEiJ_G0014831.1 mouse_genomes_project 2 28829561 28833465 - Gm14488 processed_transcript retained_intron MGP_WSBEiJ_T0100743.1 MGP_WSBEiJ_G0039201.1 mouse_genomes_project 2 152257755 152261721 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010206.1 MGP_WSBEiJ_G0008363.1 mouse_genomes_project 2 7831855 7831953 + Mir297a-4 miRNA miRNA MGP_WSBEiJ_T0099401.1 MGP_WSBEiJ_G0038064.1 mouse_genomes_project 2 162241896 162242029 + Gm25129 snoRNA snoRNA MGP_WSBEiJ_T0011288.1 MGP_WSBEiJ_G0009445.1 mouse_genomes_project 2 10618101 10618288 + Gm27540 misc_RNA misc_RNA MGP_WSBEiJ_T0007257.1 MGP_WSBEiJ_G0005953.1 mouse_genomes_project 2 160308604 160315137 + Gm14168 lincRNA lincRNA MGP_WSBEiJ_T0056062.1 MGP_WSBEiJ_G0025627.1 mouse_genomes_project 2 123064652 123096809 + MGP_WSBEiJ_P0056062 Tmem62 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0056063.1 MGP_WSBEiJ_G0025627.1 mouse_genomes_project 2 123064934 123096801 + MGP_WSBEiJ_P0056063 Tmem62 protein_coding protein_coding MGP_WSBEiJ_T0056064.1 MGP_WSBEiJ_G0025627.1 mouse_genomes_project 2 123065305 123068168 + Tmem62 protein_coding retained_intron MGP_WSBEiJ_T0056065.1 MGP_WSBEiJ_G0025627.1 mouse_genomes_project 2 123068630 123078684 + Tmem62 protein_coding processed_transcript MGP_WSBEiJ_T0056066.1 MGP_WSBEiJ_G0025627.1 mouse_genomes_project 2 123071916 123074506 + Tmem62 protein_coding processed_transcript MGP_WSBEiJ_T0056067.1 MGP_WSBEiJ_G0025627.1 mouse_genomes_project 2 123084589 123096000 + Tmem62 protein_coding retained_intron MGP_WSBEiJ_T0055737.1 MGP_WSBEiJ_G0025562.1 mouse_genomes_project 2 120061980 120077230 + MGP_WSBEiJ_P0055737 Thbs1 protein_coding protein_coding MGP_WSBEiJ_T0055738.1 MGP_WSBEiJ_G0025562.1 mouse_genomes_project 2 120073039 120073864 + Thbs1 protein_coding processed_transcript MGP_WSBEiJ_T0056782.1 MGP_WSBEiJ_G0025787.1 mouse_genomes_project 2 134541184 134547206 - MGP_WSBEiJ_P0056782 Erv3 protein_coding protein_coding MGP_WSBEiJ_T0053469.1 MGP_WSBEiJ_G0024953.1 mouse_genomes_project 2 35582916 35585766 + MGP_WSBEiJ_P0053469 protein_coding protein_coding MGP_WSBEiJ_T0003937.1 MGP_WSBEiJ_G0003508.1 mouse_genomes_project 2 74582759 74583574 - Gm28793 antisense antisense MGP_WSBEiJ_T0052694.1 MGP_WSBEiJ_G0024816.1 mouse_genomes_project 2 28063067 28080516 - MGP_WSBEiJ_P0052694 Wdr34 protein_coding protein_coding MGP_WSBEiJ_T0052695.1 MGP_WSBEiJ_G0024816.1 mouse_genomes_project 2 28063433 28064034 - Wdr34 protein_coding retained_intron MGP_WSBEiJ_T0052696.1 MGP_WSBEiJ_G0024816.1 mouse_genomes_project 2 28065329 28066579 - Wdr34 protein_coding retained_intron MGP_WSBEiJ_T0052697.1 MGP_WSBEiJ_G0024816.1 mouse_genomes_project 2 28078799 28080496 - Wdr34 protein_coding processed_transcript MGP_WSBEiJ_T0013252.1 MGP_WSBEiJ_G0011382.1 mouse_genomes_project 2 75777435 75778201 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0054770.1 MGP_WSBEiJ_G0025268.1 mouse_genomes_project 2 88028440 88029385 + MGP_WSBEiJ_P0054770 Olfr1121 protein_coding protein_coding MGP_WSBEiJ_T0010236.1 MGP_WSBEiJ_G0008393.1 mouse_genomes_project 2 30564053 30564163 + Mir199b miRNA miRNA MGP_WSBEiJ_T0100712.1 MGP_WSBEiJ_G0039170.1 mouse_genomes_project 2 87018515 87019458 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007188.1 MGP_WSBEiJ_G0005898.1 mouse_genomes_project 2 116950552 116952789 + Gm28493 lincRNA lincRNA MGP_WSBEiJ_T0003936.1 MGP_WSBEiJ_G0003507.1 mouse_genomes_project 2 74468443 74473899 + 4930445N08Rik antisense antisense MGP_WSBEiJ_T0010274.1 MGP_WSBEiJ_G0008431.1 mouse_genomes_project 2 95178943 95179043 - Mir670 miRNA miRNA MGP_WSBEiJ_T0054824.1 MGP_WSBEiJ_G0025311.1 mouse_genomes_project 2 89252746 89253658 + MGP_WSBEiJ_P0054824 Olfr1186 protein_coding protein_coding MGP_WSBEiJ_T0058522.1 MGP_WSBEiJ_G0026212.1 mouse_genomes_project 2 179044048 179056789 + MGP_WSBEiJ_P0058522 Npepl1 protein_coding protein_coding MGP_WSBEiJ_T0058523.1 MGP_WSBEiJ_G0026212.1 mouse_genomes_project 2 179044853 179054099 + MGP_WSBEiJ_P0058523 Npepl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058524.1 MGP_WSBEiJ_G0026212.1 mouse_genomes_project 2 179044879 179056419 + Npepl1 protein_coding retained_intron MGP_WSBEiJ_T0058525.1 MGP_WSBEiJ_G0026212.1 mouse_genomes_project 2 179045272 179049806 + Npepl1 protein_coding retained_intron MGP_WSBEiJ_T0011295.1 MGP_WSBEiJ_G0009452.1 mouse_genomes_project 2 39070091 39070261 - Gm27348 misc_RNA misc_RNA MGP_WSBEiJ_T0097171.1 MGP_WSBEiJ_G0035852.1 mouse_genomes_project 2 108572651 108572921 - Gm24885 ribozyme ribozyme MGP_WSBEiJ_T0013287.1 MGP_WSBEiJ_G0011417.1 mouse_genomes_project 2 87739270 87739805 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010272.1 MGP_WSBEiJ_G0008429.1 mouse_genomes_project 2 95159461 95159551 - Mir129-2 miRNA miRNA MGP_WSBEiJ_T0056231.1 MGP_WSBEiJ_G0025656.1 mouse_genomes_project 2 124227334 124257152 + MGP_WSBEiJ_P0056231 protein_coding protein_coding MGP_WSBEiJ_T0100704.1 MGP_WSBEiJ_G0039162.1 mouse_genomes_project 2 86126630 86127084 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0053346.1 MGP_WSBEiJ_G0024912.1 mouse_genomes_project 2 33374684 33458337 - MGP_WSBEiJ_P0053346 Hc protein_coding protein_coding MGP_WSBEiJ_T0053347.1 MGP_WSBEiJ_G0024912.1 mouse_genomes_project 2 33375056 33413127 - MGP_WSBEiJ_P0053347 Hc protein_coding protein_coding MGP_WSBEiJ_T0053348.1 MGP_WSBEiJ_G0024912.1 mouse_genomes_project 2 33383603 33385718 - Hc protein_coding processed_transcript MGP_WSBEiJ_T0053349.1 MGP_WSBEiJ_G0024912.1 mouse_genomes_project 2 33383697 33394343 - Hc protein_coding retained_intron MGP_WSBEiJ_T0053350.1 MGP_WSBEiJ_G0024912.1 mouse_genomes_project 2 33387329 33399818 - Hc protein_coding processed_transcript MGP_WSBEiJ_T0016208.1 MGP_WSBEiJ_G0014338.1 mouse_genomes_project X 134484543 134485230 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015910.1 MGP_WSBEiJ_G0014040.1 mouse_genomes_project X 73277098 73282160 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096377.1 MGP_WSBEiJ_G0035299.1 mouse_genomes_project X 149218291 149219577 + MGP_WSBEiJ_P0096377 Spin2c protein_coding protein_coding MGP_WSBEiJ_T0096378.1 MGP_WSBEiJ_G0035299.1 mouse_genomes_project X 149218307 149219590 + MGP_WSBEiJ_P0096378 Spin2c protein_coding protein_coding MGP_WSBEiJ_T0096379.1 MGP_WSBEiJ_G0035299.1 mouse_genomes_project X 149218359 149220310 + MGP_WSBEiJ_P0096379 Spin2c protein_coding protein_coding MGP_WSBEiJ_T0009301.1 MGP_WSBEiJ_G0007464.1 mouse_genomes_project X 164934757 164964960 + Gm15245 lincRNA lincRNA MGP_WSBEiJ_T0094207.1 MGP_WSBEiJ_G0034675.1 mouse_genomes_project X 4635938 4738893 + MGP_WSBEiJ_P0094207 Sytl5 protein_coding protein_coding MGP_WSBEiJ_T0094208.1 MGP_WSBEiJ_G0034675.1 mouse_genomes_project X 4635938 4738893 + MGP_WSBEiJ_P0094208 Sytl5 protein_coding protein_coding MGP_WSBEiJ_T0096131.1 MGP_WSBEiJ_G0035246.1 mouse_genomes_project X 136929339 136943604 - MGP_WSBEiJ_P0096131 Irs4 protein_coding protein_coding MGP_WSBEiJ_T0098715.1 MGP_WSBEiJ_G0037378.1 mouse_genomes_project X 152474828 152474992 + Gm22666 snRNA snRNA MGP_WSBEiJ_T0015650.1 MGP_WSBEiJ_G0013780.1 mouse_genomes_project X 484759 486574 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094150.1 MGP_WSBEiJ_G0034648.1 mouse_genomes_project X 2787154 2809341 - MGP_WSBEiJ_P0094150 Tbc1d25 protein_coding protein_coding MGP_WSBEiJ_T0094151.1 MGP_WSBEiJ_G0034648.1 mouse_genomes_project X 2787154 2809341 - MGP_WSBEiJ_P0094151 Tbc1d25 protein_coding protein_coding MGP_WSBEiJ_T0094152.1 MGP_WSBEiJ_G0034648.1 mouse_genomes_project X 2787165 2809118 - Tbc1d25 protein_coding retained_intron MGP_WSBEiJ_T0094153.1 MGP_WSBEiJ_G0034648.1 mouse_genomes_project X 2787387 2808993 - MGP_WSBEiJ_P0094153 Tbc1d25 protein_coding protein_coding MGP_WSBEiJ_T0015911.1 MGP_WSBEiJ_G0014041.1 mouse_genomes_project X 73287450 73288514 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016175.1 MGP_WSBEiJ_G0014305.1 mouse_genomes_project X 129014201 129015828 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015697.1 MGP_WSBEiJ_G0013827.1 mouse_genomes_project X 11123678 11123930 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015714.1 MGP_WSBEiJ_G0013844.1 mouse_genomes_project X 15202704 15204031 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098652.1 MGP_WSBEiJ_G0037315.1 mouse_genomes_project X 12084792 12084896 + Gm22294 snRNA snRNA MGP_WSBEiJ_T0016324.1 MGP_WSBEiJ_G0014454.1 mouse_genomes_project X 158168058 158168513 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095299.1 MGP_WSBEiJ_G0034988.1 mouse_genomes_project X 76104586 76141906 - MGP_WSBEiJ_P0095299 4930595M18Rik protein_coding protein_coding MGP_WSBEiJ_T0015954.1 MGP_WSBEiJ_G0014084.1 mouse_genomes_project X 83876469 83877428 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095848.1 MGP_WSBEiJ_G0035154.1 mouse_genomes_project X 123380939 123382801 + MGP_WSBEiJ_P0095848 Rbm31y protein_coding protein_coding MGP_WSBEiJ_T0005506.1 MGP_WSBEiJ_G0004637.1 mouse_genomes_project X 55444292 55695548 + antisense antisense MGP_WSBEiJ_T0101138.1 MGP_WSBEiJ_G0039595.1 mouse_genomes_project X 60934069 60934333 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016080.1 MGP_WSBEiJ_G0014210.1 mouse_genomes_project X 102559878 102560193 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094048.1 MGP_WSBEiJ_G0034627.1 mouse_genomes_project X 2336998 2340689 + MGP_WSBEiJ_P0094048 Praf2 protein_coding protein_coding MGP_WSBEiJ_T0094544.1 MGP_WSBEiJ_G0034786.1 mouse_genomes_project X 37205206 37851710 - MGP_WSBEiJ_P0094544 Tenm1 protein_coding protein_coding MGP_WSBEiJ_T0094545.1 MGP_WSBEiJ_G0034786.1 mouse_genomes_project X 37205206 37851731 - MGP_WSBEiJ_P0094545 Tenm1 protein_coding protein_coding MGP_WSBEiJ_T0094546.1 MGP_WSBEiJ_G0034786.1 mouse_genomes_project X 37209735 37954028 - MGP_WSBEiJ_P0094546 Tenm1 protein_coding protein_coding MGP_WSBEiJ_T0094547.1 MGP_WSBEiJ_G0034786.1 mouse_genomes_project X 37504482 38106700 - Tenm1 protein_coding retained_intron MGP_WSBEiJ_T0094548.1 MGP_WSBEiJ_G0034786.1 mouse_genomes_project X 37581279 38106822 - Tenm1 protein_coding retained_intron MGP_WSBEiJ_T0094549.1 MGP_WSBEiJ_G0034786.1 mouse_genomes_project X 38003179 38106700 - Tenm1 protein_coding processed_transcript MGP_WSBEiJ_T0098665.1 MGP_WSBEiJ_G0037328.1 mouse_genomes_project X 42913695 42913854 + Gm24038 snRNA snRNA MGP_WSBEiJ_T0016136.1 MGP_WSBEiJ_G0014266.1 mouse_genomes_project X 115131841 115132697 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095590.1 MGP_WSBEiJ_G0035065.1 mouse_genomes_project X 96362832 96367515 + MGP_WSBEiJ_P0095590 Itgb1bp2 protein_coding protein_coding MGP_WSBEiJ_T0095591.1 MGP_WSBEiJ_G0035065.1 mouse_genomes_project X 96366084 96367118 + Itgb1bp2 protein_coding retained_intron MGP_WSBEiJ_T0015760.1 MGP_WSBEiJ_G0013890.1 mouse_genomes_project X 38089336 38089994 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099923.1 MGP_WSBEiJ_G0038586.1 mouse_genomes_project X 88036391 88036474 + Gm24123 snoRNA snoRNA MGP_WSBEiJ_T0011027.1 MGP_WSBEiJ_G0009184.1 mouse_genomes_project X 142198879 142198966 + Mir1912 miRNA miRNA MGP_WSBEiJ_T0094310.1 MGP_WSBEiJ_G0034705.1 mouse_genomes_project X 15223883 15235855 + MGP_WSBEiJ_P0094310 Rgn protein_coding protein_coding MGP_WSBEiJ_T0015929.1 MGP_WSBEiJ_G0014059.1 mouse_genomes_project X 78764190 78764622 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094376.1 MGP_WSBEiJ_G0034723.1 mouse_genomes_project X 16422379 16451954 + MGP_WSBEiJ_P0094376 Slc6a14 protein_coding protein_coding MGP_WSBEiJ_T0099909.1 MGP_WSBEiJ_G0038572.1 mouse_genomes_project X 62399384 62399493 - Gm26276 snoRNA snoRNA MGP_WSBEiJ_T0010935.1 MGP_WSBEiJ_G0009092.1 mouse_genomes_project X 13858379 13858458 - Mir222 miRNA miRNA MGP_WSBEiJ_T0094576.1 MGP_WSBEiJ_G0034796.1 mouse_genomes_project X 42816496 42831677 + MGP_WSBEiJ_P0094576 Sash3 protein_coding protein_coding MGP_WSBEiJ_T0010947.1 MGP_WSBEiJ_G0009104.1 mouse_genomes_project X 47027184 47027245 - Mir6384 miRNA miRNA MGP_WSBEiJ_T0015867.1 MGP_WSBEiJ_G0013997.1 mouse_genomes_project X 63122658 63123271 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094833.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66204468 66229671 + MGP_WSBEiJ_P0094833 Mtmr1 protein_coding protein_coding MGP_WSBEiJ_T0094834.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66204468 66260320 + MGP_WSBEiJ_P0094834 Mtmr1 protein_coding protein_coding MGP_WSBEiJ_T0094835.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66204645 66235213 + MGP_WSBEiJ_P0094835 Mtmr1 protein_coding protein_coding MGP_WSBEiJ_T0094836.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66209537 66229649 + MGP_WSBEiJ_P0094836 Mtmr1 protein_coding protein_coding MGP_WSBEiJ_T0094837.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66209537 66229649 + MGP_WSBEiJ_P0094837 Mtmr1 protein_coding protein_coding MGP_WSBEiJ_T0094838.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66209537 66229649 + MGP_WSBEiJ_P0094838 Mtmr1 protein_coding protein_coding MGP_WSBEiJ_T0094839.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66232104 66233507 + Mtmr1 protein_coding retained_intron MGP_WSBEiJ_T0094840.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66232605 66233844 + Mtmr1 protein_coding retained_intron MGP_WSBEiJ_T0094841.1 MGP_WSBEiJ_G0034889.1 mouse_genomes_project X 66234907 66259788 + Mtmr1 protein_coding retained_intron MGP_WSBEiJ_T0016044.1 MGP_WSBEiJ_G0014174.1 mouse_genomes_project X 98373284 98373739 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095261.1 MGP_WSBEiJ_G0034972.1 mouse_genomes_project X 71587803 71597549 - MGP_WSBEiJ_P0095261 Cldn34d protein_coding protein_coding MGP_WSBEiJ_T0015758.1 MGP_WSBEiJ_G0013888.1 mouse_genomes_project X 37018671 37018839 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099927.1 MGP_WSBEiJ_G0038590.1 mouse_genomes_project X 99170144 99170282 - Gm22266 snoRNA snoRNA MGP_WSBEiJ_T0095831.1 MGP_WSBEiJ_G0035146.1 mouse_genomes_project X 114941770 114945836 + MGP_WSBEiJ_P0095831 Pabpc5 protein_coding protein_coding MGP_WSBEiJ_T0095832.1 MGP_WSBEiJ_G0035146.1 mouse_genomes_project X 114941799 114945680 + MGP_WSBEiJ_P0095832 Pabpc5 protein_coding protein_coding MGP_WSBEiJ_T0095777.1 MGP_WSBEiJ_G0035126.1 mouse_genomes_project X 106210703 106223632 + MGP_WSBEiJ_P0095777 Cylc1 protein_coding protein_coding MGP_WSBEiJ_T0016313.1 MGP_WSBEiJ_G0014443.1 mouse_genomes_project X 155006786 155007349 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015970.1 MGP_WSBEiJ_G0014100.1 mouse_genomes_project X 86365866 86367013 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016332.1 MGP_WSBEiJ_G0014462.1 mouse_genomes_project X 158835204 158835674 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016294.1 MGP_WSBEiJ_G0014424.1 mouse_genomes_project X 152096013 152096482 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096273.1 MGP_WSBEiJ_G0035276.1 mouse_genomes_project X 146426094 146436603 - MGP_WSBEiJ_P0096273 Tsr2 protein_coding protein_coding MGP_WSBEiJ_T0096274.1 MGP_WSBEiJ_G0035276.1 mouse_genomes_project X 146426095 146436603 - MGP_WSBEiJ_P0096274 Tsr2 protein_coding protein_coding MGP_WSBEiJ_T0096275.1 MGP_WSBEiJ_G0035276.1 mouse_genomes_project X 146428481 146436603 - MGP_WSBEiJ_P0096275 Tsr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096276.1 MGP_WSBEiJ_G0035276.1 mouse_genomes_project X 146428692 146436583 - Tsr2 protein_coding processed_transcript MGP_WSBEiJ_T0095615.1 MGP_WSBEiJ_G0035071.1 mouse_genomes_project X 96995417 97000070 - MGP_WSBEiJ_P0095615 Rgag4 protein_coding protein_coding MGP_WSBEiJ_T0095616.1 MGP_WSBEiJ_G0035071.1 mouse_genomes_project X 96995417 97000178 - MGP_WSBEiJ_P0095616 Rgag4 protein_coding protein_coding MGP_WSBEiJ_T0095617.1 MGP_WSBEiJ_G0035071.1 mouse_genomes_project X 96995607 96996474 - Rgag4 protein_coding processed_transcript MGP_WSBEiJ_T0015680.1 MGP_WSBEiJ_G0013810.1 mouse_genomes_project X 6756350 6756580 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095829.1 MGP_WSBEiJ_G0035144.1 mouse_genomes_project X 111706811 111707159 + MGP_WSBEiJ_P0095829 H2afb2 protein_coding protein_coding MGP_WSBEiJ_T0016331.1 MGP_WSBEiJ_G0014461.1 mouse_genomes_project X 158780714 158781180 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015696.1 MGP_WSBEiJ_G0013826.1 mouse_genomes_project X 11030427 11030814 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094444.1 MGP_WSBEiJ_G0034749.1 mouse_genomes_project X 31906553 31907776 + MGP_WSBEiJ_P0094444 Rnf113a1 protein_coding protein_coding MGP_WSBEiJ_T0016244.1 MGP_WSBEiJ_G0014374.1 mouse_genomes_project X 139524384 139524717 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018002.1 MGP_WSBEiJ_G0015190.1 mouse_genomes_project X 7872626 7875818 + 5730405O15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018003.1 MGP_WSBEiJ_G0015190.1 mouse_genomes_project X 7872662 7875905 + 5730405O15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016211.1 MGP_WSBEiJ_G0014341.1 mouse_genomes_project X 135047273 135048752 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005496.1 MGP_WSBEiJ_G0004628.1 mouse_genomes_project X 5468915 5470153 - Gm14493 antisense antisense MGP_WSBEiJ_T0016194.1 MGP_WSBEiJ_G0014324.1 mouse_genomes_project X 132033280 132034402 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094237.1 MGP_WSBEiJ_G0034682.1 mouse_genomes_project X 7393903 7402714 + Atp6ap2 protein_coding retained_intron MGP_WSBEiJ_T0094238.1 MGP_WSBEiJ_G0034682.1 mouse_genomes_project X 7393903 7426981 + MGP_WSBEiJ_P0094238 Atp6ap2 protein_coding protein_coding MGP_WSBEiJ_T0094971.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68766227 68787247 - MGP_WSBEiJ_P0094971 Arhgap4 protein_coding protein_coding MGP_WSBEiJ_T0094976.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769137 68787241 - MGP_WSBEiJ_P0094976 Arhgap4 protein_coding protein_coding MGP_WSBEiJ_T0094977.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769143 68787207 - MGP_WSBEiJ_P0094977 Arhgap4 protein_coding protein_coding MGP_WSBEiJ_T0094978.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769317 68787182 - Arhgap4 protein_coding retained_intron MGP_WSBEiJ_T0094979.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769317 68787182 - Arhgap4 protein_coding retained_intron MGP_WSBEiJ_T0094980.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769317 68787182 - Arhgap4 protein_coding retained_intron MGP_WSBEiJ_T0094981.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769317 68787182 - Arhgap4 protein_coding retained_intron MGP_WSBEiJ_T0094982.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769317 68787182 - Arhgap4 protein_coding retained_intron MGP_WSBEiJ_T0094983.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769317 68787182 - MGP_WSBEiJ_P0094983 Arhgap4 protein_coding protein_coding MGP_WSBEiJ_T0094984.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769317 68787182 - MGP_WSBEiJ_P0094984 Arhgap4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094985.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769323 68787182 - MGP_WSBEiJ_P0094985 Arhgap4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094986.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68769461 68787140 - MGP_WSBEiJ_P0094986 Arhgap4 protein_coding protein_coding MGP_WSBEiJ_T0094987.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68771196 68772212 - Arhgap4 protein_coding processed_transcript MGP_WSBEiJ_T0094988.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68771599 68772852 - MGP_WSBEiJ_P0094988 Arhgap4 protein_coding protein_coding MGP_WSBEiJ_T0094989.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68771656 68774411 - MGP_WSBEiJ_P0094989 Arhgap4 protein_coding protein_coding MGP_WSBEiJ_T0094990.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68774097 68797732 - Arhgap4 protein_coding retained_intron MGP_WSBEiJ_T0094991.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68774101 68775523 - Arhgap4 protein_coding processed_transcript MGP_WSBEiJ_T0094992.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68774893 68780154 - MGP_WSBEiJ_P0094992 Arhgap4 protein_coding protein_coding MGP_WSBEiJ_T0094993.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68780882 68787209 - Arhgap4 protein_coding processed_transcript MGP_WSBEiJ_T0094994.1 MGP_WSBEiJ_G0034927.1 mouse_genomes_project X 68781277 68787204 - MGP_WSBEiJ_P0094994 Arhgap4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010998.1 MGP_WSBEiJ_G0009155.1 mouse_genomes_project X 89188650 89188714 + Mir7673 miRNA miRNA MGP_WSBEiJ_T0094706.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51598588 51660704 + MGP_WSBEiJ_P0094706 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094707.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51598768 51659601 + MGP_WSBEiJ_P0094707 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094708.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51621319 51660712 + MGP_WSBEiJ_P0094708 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094709.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51646816 51660706 + MGP_WSBEiJ_P0094709 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094710.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51647102 51660706 + MGP_WSBEiJ_P0094710 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094711.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51647109 51659954 + MGP_WSBEiJ_P0094711 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094712.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51647198 51656571 + MGP_WSBEiJ_P0094712 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094713.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51653891 51658032 + MGP_WSBEiJ_P0094713 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094714.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51655090 51656621 + MGP_WSBEiJ_P0094714 Fhl1 protein_coding protein_coding MGP_WSBEiJ_T0094715.1 MGP_WSBEiJ_G0034848.1 mouse_genomes_project X 51655363 51657109 + Fhl1 protein_coding processed_transcript MGP_WSBEiJ_T0096137.1 MGP_WSBEiJ_G0035250.1 mouse_genomes_project X 137431690 137441647 + MGP_WSBEiJ_P0096137 Nxt2 protein_coding protein_coding MGP_WSBEiJ_T0096138.1 MGP_WSBEiJ_G0035250.1 mouse_genomes_project X 137432921 137434497 + Nxt2 protein_coding retained_intron MGP_WSBEiJ_T0096139.1 MGP_WSBEiJ_G0035250.1 mouse_genomes_project X 137433061 137441653 + MGP_WSBEiJ_P0096139 Nxt2 protein_coding protein_coding MGP_WSBEiJ_T0093979.1 MGP_WSBEiJ_G0034612.1 mouse_genomes_project X 1557402 1614993 - MGP_WSBEiJ_P0093979 Ccnb3 protein_coding protein_coding MGP_WSBEiJ_T0093980.1 MGP_WSBEiJ_G0034612.1 mouse_genomes_project X 1557402 1625669 - MGP_WSBEiJ_P0093980 Ccnb3 protein_coding protein_coding MGP_WSBEiJ_T0096619.1 MGP_WSBEiJ_G0035361.1 mouse_genomes_project X 161951269 161962120 - MGP_WSBEiJ_P0096619 Tceanc protein_coding protein_coding MGP_WSBEiJ_T0096620.1 MGP_WSBEiJ_G0035361.1 mouse_genomes_project X 161953776 161954856 - MGP_WSBEiJ_P0096620 Tceanc protein_coding protein_coding MGP_WSBEiJ_T0096621.1 MGP_WSBEiJ_G0035361.1 mouse_genomes_project X 161954750 161970207 - MGP_WSBEiJ_P0096621 Tceanc protein_coding protein_coding MGP_WSBEiJ_T0016235.1 MGP_WSBEiJ_G0014365.1 mouse_genomes_project X 137829811 137830222 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009282.1 MGP_WSBEiJ_G0007453.1 mouse_genomes_project X 146512824 146514894 + Gm15138 lincRNA lincRNA MGP_WSBEiJ_T0015937.1 MGP_WSBEiJ_G0014067.1 mouse_genomes_project X 80499799 80500228 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094374.1 MGP_WSBEiJ_G0034722.1 mouse_genomes_project X 16185707 16190327 + MGP_WSBEiJ_P0094374 Agtr2 protein_coding protein_coding MGP_WSBEiJ_T0094375.1 MGP_WSBEiJ_G0034722.1 mouse_genomes_project X 16185885 16187466 + Agtr2 protein_coding processed_transcript MGP_WSBEiJ_T0098691.1 MGP_WSBEiJ_G0037354.1 mouse_genomes_project X 101822137 101822244 - Gm24491 snRNA snRNA MGP_WSBEiJ_T0016213.1 MGP_WSBEiJ_G0014343.1 mouse_genomes_project X 135625229 135626058 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015924.1 MGP_WSBEiJ_G0014054.1 mouse_genomes_project X 76508764 76512425 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016351.1 MGP_WSBEiJ_G0014481.1 mouse_genomes_project X 163858624 163859019 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094849.1 MGP_WSBEiJ_G0034892.1 mouse_genomes_project X 66515039 66522150 + MGP_WSBEiJ_P0094849 Gpr50 protein_coding protein_coding MGP_WSBEiJ_T0094850.1 MGP_WSBEiJ_G0034892.1 mouse_genomes_project X 66515338 66520285 + Gpr50 protein_coding processed_transcript MGP_WSBEiJ_T0094851.1 MGP_WSBEiJ_G0034892.1 mouse_genomes_project X 66515338 66520285 + Gpr50 protein_coding processed_transcript MGP_WSBEiJ_T0095246.1 MGP_WSBEiJ_G0034965.1 mouse_genomes_project X 70436405 70446179 + MGP_WSBEiJ_P0095246 Vbp1 protein_coding protein_coding MGP_WSBEiJ_T0095247.1 MGP_WSBEiJ_G0034965.1 mouse_genomes_project X 70436405 70457093 + MGP_WSBEiJ_P0095247 Vbp1 protein_coding protein_coding MGP_WSBEiJ_T0095248.1 MGP_WSBEiJ_G0034965.1 mouse_genomes_project X 70436423 70443889 + Vbp1 protein_coding retained_intron MGP_WSBEiJ_T0099908.1 MGP_WSBEiJ_G0038571.1 mouse_genomes_project X 52291333 52291404 - Snord61 snoRNA snoRNA MGP_WSBEiJ_T0094230.1 MGP_WSBEiJ_G0034681.1 mouse_genomes_project X 6811636 6855386 - MGP_WSBEiJ_P0094230 Bcor protein_coding protein_coding MGP_WSBEiJ_T0094231.1 MGP_WSBEiJ_G0034681.1 mouse_genomes_project X 6811636 6855386 - MGP_WSBEiJ_P0094231 Bcor protein_coding protein_coding MGP_WSBEiJ_T0094232.1 MGP_WSBEiJ_G0034681.1 mouse_genomes_project X 6811636 6855386 - MGP_WSBEiJ_P0094232 Bcor protein_coding protein_coding MGP_WSBEiJ_T0094233.1 MGP_WSBEiJ_G0034681.1 mouse_genomes_project X 6811636 6855386 - MGP_WSBEiJ_P0094233 Bcor protein_coding protein_coding MGP_WSBEiJ_T0094234.1 MGP_WSBEiJ_G0034681.1 mouse_genomes_project X 6811639 6942682 - MGP_WSBEiJ_P0094234 Bcor protein_coding protein_coding MGP_WSBEiJ_T0094235.1 MGP_WSBEiJ_G0034681.1 mouse_genomes_project X 6833880 6907630 - MGP_WSBEiJ_P0094235 Bcor protein_coding protein_coding MGP_WSBEiJ_T0094236.1 MGP_WSBEiJ_G0034681.1 mouse_genomes_project X 6833970 6907580 - MGP_WSBEiJ_P0094236 Bcor protein_coding protein_coding MGP_WSBEiJ_T0016259.1 MGP_WSBEiJ_G0014389.1 mouse_genomes_project X 141706919 141707393 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093974.1 MGP_WSBEiJ_G0034609.1 mouse_genomes_project X 937776 944398 - MGP_WSBEiJ_P0093974 Bmp15 protein_coding protein_coding MGP_WSBEiJ_T0094881.1 MGP_WSBEiJ_G0034905.1 mouse_genomes_project X 67826238 67870674 + MGP_WSBEiJ_P0094881 Zfp185 protein_coding protein_coding MGP_WSBEiJ_T0094882.1 MGP_WSBEiJ_G0034905.1 mouse_genomes_project X 67826259 67870674 + MGP_WSBEiJ_P0094882 Zfp185 protein_coding protein_coding MGP_WSBEiJ_T0094883.1 MGP_WSBEiJ_G0034905.1 mouse_genomes_project X 67827152 67836456 + MGP_WSBEiJ_P0094883 Zfp185 protein_coding protein_coding MGP_WSBEiJ_T0094474.1 MGP_WSBEiJ_G0034773.1 mouse_genomes_project X 32884523 32940189 - MGP_WSBEiJ_P0094474 Tmem255a protein_coding protein_coding MGP_WSBEiJ_T0094475.1 MGP_WSBEiJ_G0034773.1 mouse_genomes_project X 32885256 32940199 - Tmem255a protein_coding retained_intron MGP_WSBEiJ_T0094476.1 MGP_WSBEiJ_G0034773.1 mouse_genomes_project X 32885256 32940199 - MGP_WSBEiJ_P0094476 Tmem255a protein_coding protein_coding MGP_WSBEiJ_T0094477.1 MGP_WSBEiJ_G0034773.1 mouse_genomes_project X 32885256 32940199 - MGP_WSBEiJ_P0094477 Tmem255a protein_coding protein_coding MGP_WSBEiJ_T0094478.1 MGP_WSBEiJ_G0034773.1 mouse_genomes_project X 32903072 32940161 - Tmem255a protein_coding processed_transcript MGP_WSBEiJ_T0009247.1 MGP_WSBEiJ_G0007434.1 mouse_genomes_project X 94296066 94340315 - Gm14812 lincRNA lincRNA MGP_WSBEiJ_T0002437.1 MGP_WSBEiJ_G0002353.1 mouse_genomes_project X 123381458 123382523 + TEC TEC MGP_WSBEiJ_T0100179.1 MGP_WSBEiJ_G0038749.1 mouse_genomes_project X 67724405 67725304 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100180.1 MGP_WSBEiJ_G0038749.1 mouse_genomes_project X 67724405 67725137 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0094639.1 MGP_WSBEiJ_G0034816.1 mouse_genomes_project X 45438285 45492484 + MGP_WSBEiJ_P0094639 Stk26 protein_coding protein_coding MGP_WSBEiJ_T0094640.1 MGP_WSBEiJ_G0034816.1 mouse_genomes_project X 45438679 45478249 + Stk26 protein_coding retained_intron MGP_WSBEiJ_T0094641.1 MGP_WSBEiJ_G0034816.1 mouse_genomes_project X 45438679 45492484 + MGP_WSBEiJ_P0094641 Stk26 protein_coding protein_coding MGP_WSBEiJ_T0094642.1 MGP_WSBEiJ_G0034816.1 mouse_genomes_project X 45476562 45490023 + Stk26 protein_coding retained_intron MGP_WSBEiJ_T0015720.1 MGP_WSBEiJ_G0013850.1 mouse_genomes_project X 16893258 16893612 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015810.1 MGP_WSBEiJ_G0013940.1 mouse_genomes_project X 51117199 51117490 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015908.1 MGP_WSBEiJ_G0014038.1 mouse_genomes_project X 72592740 72594152 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096408.1 MGP_WSBEiJ_G0035310.1 mouse_genomes_project X 152973544 153008665 - Mbtps2 protein_coding processed_transcript MGP_WSBEiJ_T0096409.1 MGP_WSBEiJ_G0035310.1 mouse_genomes_project X 152986641 153040774 - MGP_WSBEiJ_P0096409 Mbtps2 protein_coding protein_coding MGP_WSBEiJ_T0096410.1 MGP_WSBEiJ_G0035310.1 mouse_genomes_project X 153005605 153040709 - MGP_WSBEiJ_P0096410 Mbtps2 protein_coding protein_coding MGP_WSBEiJ_T0096411.1 MGP_WSBEiJ_G0035310.1 mouse_genomes_project X 153005606 153040709 - MGP_WSBEiJ_P0096411 Mbtps2 protein_coding protein_coding MGP_WSBEiJ_T0096413.1 MGP_WSBEiJ_G0035310.1 mouse_genomes_project X 153008725 153019196 - Mbtps2 protein_coding processed_transcript MGP_WSBEiJ_T0096414.1 MGP_WSBEiJ_G0035310.1 mouse_genomes_project X 153010633 153040710 - Mbtps2 protein_coding retained_intron MGP_WSBEiJ_T0096415.1 MGP_WSBEiJ_G0035310.1 mouse_genomes_project X 153012360 153040738 - MGP_WSBEiJ_P0096415 Mbtps2 protein_coding protein_coding MGP_WSBEiJ_T0096416.1 MGP_WSBEiJ_G0035310.1 mouse_genomes_project X 153032202 153040702 - Mbtps2 protein_coding retained_intron MGP_WSBEiJ_T0016166.1 MGP_WSBEiJ_G0014296.1 mouse_genomes_project X 126548673 126550502 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100191.1 MGP_WSBEiJ_G0038758.1 mouse_genomes_project X 164854573 164856244 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0016064.1 MGP_WSBEiJ_G0014194.1 mouse_genomes_project X 100810705 100810897 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016204.1 MGP_WSBEiJ_G0014334.1 mouse_genomes_project X 133640545 133641788 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011567.1 MGP_WSBEiJ_G0009724.1 mouse_genomes_project X 98659370 98659441 + Gm27798 misc_RNA misc_RNA MGP_WSBEiJ_T0016296.1 MGP_WSBEiJ_G0014426.1 mouse_genomes_project X 152810376 152811386 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096141.1 MGP_WSBEiJ_G0035252.1 mouse_genomes_project X 137517304 137591897 - MGP_WSBEiJ_P0096141 Acsl4 protein_coding protein_coding MGP_WSBEiJ_T0096142.1 MGP_WSBEiJ_G0035252.1 mouse_genomes_project X 137519981 137527298 - Acsl4 protein_coding processed_transcript MGP_WSBEiJ_T0096143.1 MGP_WSBEiJ_G0035252.1 mouse_genomes_project X 137519987 137591953 - MGP_WSBEiJ_P0096143 Acsl4 protein_coding protein_coding MGP_WSBEiJ_T0011019.1 MGP_WSBEiJ_G0009176.1 mouse_genomes_project X 131235559 131235675 + Mir6383 miRNA miRNA MGP_WSBEiJ_T0096390.1 MGP_WSBEiJ_G0035304.1 mouse_genomes_project X 150723515 150724654 + Acot9 protein_coding processed_transcript MGP_WSBEiJ_T0096391.1 MGP_WSBEiJ_G0035304.1 mouse_genomes_project X 150723515 150761298 + MGP_WSBEiJ_P0096391 Acot9 protein_coding protein_coding MGP_WSBEiJ_T0096392.1 MGP_WSBEiJ_G0035304.1 mouse_genomes_project X 150723577 150761290 + MGP_WSBEiJ_P0096392 Acot9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096393.1 MGP_WSBEiJ_G0035304.1 mouse_genomes_project X 150757486 150760557 + Acot9 protein_coding retained_intron MGP_WSBEiJ_T0016008.1 MGP_WSBEiJ_G0014138.1 mouse_genomes_project X 91957106 91957912 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015965.1 MGP_WSBEiJ_G0014095.1 mouse_genomes_project X 86073439 86074463 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094463.1 MGP_WSBEiJ_G0034767.1 mouse_genomes_project X 32671436 32712159 - MGP_WSBEiJ_P0094463 Btg1-ps2 protein_coding protein_coding MGP_WSBEiJ_T0015762.1 MGP_WSBEiJ_G0013892.1 mouse_genomes_project X 38270482 38270765 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096069.1 MGP_WSBEiJ_G0035227.1 mouse_genomes_project X 134705939 134820616 + MGP_WSBEiJ_P0096069 Rnf128 protein_coding protein_coding MGP_WSBEiJ_T0096070.1 MGP_WSBEiJ_G0035227.1 mouse_genomes_project X 134754909 134820623 + MGP_WSBEiJ_P0096070 Rnf128 protein_coding protein_coding MGP_WSBEiJ_T0096071.1 MGP_WSBEiJ_G0035227.1 mouse_genomes_project X 134755656 134819217 + Rnf128 protein_coding processed_transcript MGP_WSBEiJ_T0096439.1 MGP_WSBEiJ_G0035317.1 mouse_genomes_project X 154779248 154783629 + Eif1ax protein_coding retained_intron MGP_WSBEiJ_T0096440.1 MGP_WSBEiJ_G0035317.1 mouse_genomes_project X 154779248 154796906 + MGP_WSBEiJ_P0096440 Eif1ax protein_coding protein_coding MGP_WSBEiJ_T0015751.1 MGP_WSBEiJ_G0013881.1 mouse_genomes_project X 35590441 35591552 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094689.1 MGP_WSBEiJ_G0034840.1 mouse_genomes_project X 50651033 50651570 - MGP_WSBEiJ_P0094689 protein_coding protein_coding MGP_WSBEiJ_T0094751.1 MGP_WSBEiJ_G0034860.1 mouse_genomes_project X 53763367 53769688 + MGP_WSBEiJ_P0094751 4930550L24Rik protein_coding protein_coding MGP_WSBEiJ_T0094752.1 MGP_WSBEiJ_G0034860.1 mouse_genomes_project X 53765456 53769688 + MGP_WSBEiJ_P0094752 4930550L24Rik protein_coding protein_coding MGP_WSBEiJ_T0094789.1 MGP_WSBEiJ_G0034878.1 mouse_genomes_project X 63418744 63420137 + MGP_WSBEiJ_P0094789 protein_coding protein_coding MGP_WSBEiJ_T0015887.1 MGP_WSBEiJ_G0014017.1 mouse_genomes_project X 69177232 69177448 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096466.1 MGP_WSBEiJ_G0035322.1 mouse_genomes_project X 155553659 155569836 - MGP_WSBEiJ_P0096466 Pdha1 protein_coding protein_coding MGP_WSBEiJ_T0096467.1 MGP_WSBEiJ_G0035322.1 mouse_genomes_project X 155558766 155560441 - Pdha1 protein_coding retained_intron MGP_WSBEiJ_T0096468.1 MGP_WSBEiJ_G0035322.1 mouse_genomes_project X 155560763 155569732 - Pdha1 protein_coding retained_intron MGP_WSBEiJ_T0096469.1 MGP_WSBEiJ_G0035322.1 mouse_genomes_project X 155568316 155569779 - Pdha1 protein_coding processed_transcript MGP_WSBEiJ_T0100188.1 MGP_WSBEiJ_G0038756.1 mouse_genomes_project X 147785013 147787045 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100189.1 MGP_WSBEiJ_G0038756.1 mouse_genomes_project X 147785130 147786272 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0095909.1 MGP_WSBEiJ_G0035172.1 mouse_genomes_project X 129520945 129563982 - MGP_WSBEiJ_P0095909 Btk protein_coding protein_coding MGP_WSBEiJ_T0095910.1 MGP_WSBEiJ_G0035172.1 mouse_genomes_project X 129520979 129563970 - MGP_WSBEiJ_P0095910 Btk protein_coding protein_coding MGP_WSBEiJ_T0095911.1 MGP_WSBEiJ_G0035172.1 mouse_genomes_project X 129528364 129563982 - Btk protein_coding retained_intron MGP_WSBEiJ_T0095912.1 MGP_WSBEiJ_G0035172.1 mouse_genomes_project X 129549277 129563315 - Btk protein_coding processed_transcript MGP_WSBEiJ_T0095913.1 MGP_WSBEiJ_G0035172.1 mouse_genomes_project X 129553487 129564412 - Btk protein_coding processed_transcript MGP_WSBEiJ_T0015703.1 MGP_WSBEiJ_G0013833.1 mouse_genomes_project X 13639409 13639815 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095232.1 MGP_WSBEiJ_G0034962.1 mouse_genomes_project X 70322081 70333772 - MGP_WSBEiJ_P0095232 Cmc4 protein_coding protein_coding MGP_WSBEiJ_T0095233.1 MGP_WSBEiJ_G0034962.1 mouse_genomes_project X 70322261 70333791 - MGP_WSBEiJ_P0095233 Cmc4 protein_coding protein_coding MGP_WSBEiJ_T0095234.1 MGP_WSBEiJ_G0034962.1 mouse_genomes_project X 70322305 70327116 - MGP_WSBEiJ_P0095234 Cmc4 protein_coding protein_coding MGP_WSBEiJ_T0011576.1 MGP_WSBEiJ_G0009733.1 mouse_genomes_project X 131801943 131802236 + Gm23068 misc_RNA misc_RNA MGP_WSBEiJ_T0094802.1 MGP_WSBEiJ_G0034880.1 mouse_genomes_project X 63553918 63595949 + MGP_WSBEiJ_P0094802 Fmr1nb protein_coding protein_coding MGP_WSBEiJ_T0094803.1 MGP_WSBEiJ_G0034880.1 mouse_genomes_project X 63553960 63595949 + MGP_WSBEiJ_P0094803 Fmr1nb protein_coding protein_coding MGP_WSBEiJ_T0094804.1 MGP_WSBEiJ_G0034880.1 mouse_genomes_project X 63554013 63595949 + MGP_WSBEiJ_P0094804 Fmr1nb protein_coding protein_coding MGP_WSBEiJ_T0094195.1 MGP_WSBEiJ_G0034670.1 mouse_genomes_project X 4006814 4012763 - MGP_WSBEiJ_P0094195 Gm14862 protein_coding protein_coding MGP_WSBEiJ_T0010975.1 MGP_WSBEiJ_G0009132.1 mouse_genomes_project X 61670515 61670593 - Mir880 miRNA miRNA MGP_WSBEiJ_T0096496.1 MGP_WSBEiJ_G0035328.1 mouse_genomes_project X 156359036 156363976 - MGP_WSBEiJ_P0096496 Gja6 protein_coding protein_coding MGP_WSBEiJ_T0016173.1 MGP_WSBEiJ_G0014303.1 mouse_genomes_project X 128190586 128191621 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095477.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875295 95194736 + Eda protein_coding retained_intron MGP_WSBEiJ_T0095478.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875295 95285640 + MGP_WSBEiJ_P0095478 Eda protein_coding protein_coding MGP_WSBEiJ_T0095479.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875295 95285637 + MGP_WSBEiJ_P0095479 Eda protein_coding protein_coding MGP_WSBEiJ_T0095480.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875295 95285640 + MGP_WSBEiJ_P0095480 Eda protein_coding protein_coding MGP_WSBEiJ_T0095481.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875295 95285637 + MGP_WSBEiJ_P0095481 Eda protein_coding protein_coding MGP_WSBEiJ_T0095482.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875295 95285638 + MGP_WSBEiJ_P0095482 Eda protein_coding protein_coding MGP_WSBEiJ_T0095483.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875470 95285645 + MGP_WSBEiJ_P0095483 Eda protein_coding protein_coding MGP_WSBEiJ_T0095484.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875470 95282034 + MGP_WSBEiJ_P0095484 Eda protein_coding protein_coding MGP_WSBEiJ_T0095485.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 94875470 95280688 + MGP_WSBEiJ_P0095485 Eda protein_coding protein_coding MGP_WSBEiJ_T0095486.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 95269654 95279314 + Eda protein_coding processed_transcript MGP_WSBEiJ_T0095487.1 MGP_WSBEiJ_G0035041.1 mouse_genomes_project X 95272122 95279912 + Eda protein_coding processed_transcript MGP_WSBEiJ_T0005533.1 MGP_WSBEiJ_G0004657.1 mouse_genomes_project X 151081427 151082000 + Gm15156 antisense antisense MGP_WSBEiJ_T0094935.1 MGP_WSBEiJ_G0034922.1 mouse_genomes_project X 68644908 68649424 + Srpk3 protein_coding retained_intron MGP_WSBEiJ_T0094936.1 MGP_WSBEiJ_G0034922.1 mouse_genomes_project X 68644908 68649424 + MGP_WSBEiJ_P0094936 Srpk3 protein_coding protein_coding MGP_WSBEiJ_T0094937.1 MGP_WSBEiJ_G0034922.1 mouse_genomes_project X 68648443 68649101 + Srpk3 protein_coding retained_intron MGP_WSBEiJ_T0094938.1 MGP_WSBEiJ_G0034922.1 mouse_genomes_project X 68648476 68649227 + Srpk3 protein_coding retained_intron MGP_WSBEiJ_T0094656.1 MGP_WSBEiJ_G0034821.1 mouse_genomes_project X 46375751 46426689 - MGP_WSBEiJ_P0094656 Usp26 protein_coding protein_coding MGP_WSBEiJ_T0094657.1 MGP_WSBEiJ_G0034821.1 mouse_genomes_project X 46375751 46426600 - MGP_WSBEiJ_P0094657 Usp26 protein_coding protein_coding MGP_WSBEiJ_T0015897.1 MGP_WSBEiJ_G0014027.1 mouse_genomes_project X 70395878 70396170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015889.1 MGP_WSBEiJ_G0014019.1 mouse_genomes_project X 69407041 69407429 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009263.1 MGP_WSBEiJ_G0007440.1 mouse_genomes_project X 99919347 99943759 + 1700121L16Rik lincRNA lincRNA MGP_WSBEiJ_T0095635.1 MGP_WSBEiJ_G0035077.1 mouse_genomes_project X 97456250 97590835 - MGP_WSBEiJ_P0095635 Phka1 protein_coding protein_coding MGP_WSBEiJ_T0095636.1 MGP_WSBEiJ_G0035077.1 mouse_genomes_project X 97456250 97590835 - MGP_WSBEiJ_P0095636 Phka1 protein_coding protein_coding MGP_WSBEiJ_T0095637.1 MGP_WSBEiJ_G0035077.1 mouse_genomes_project X 97456250 97590835 - MGP_WSBEiJ_P0095637 Phka1 protein_coding protein_coding MGP_WSBEiJ_T0095638.1 MGP_WSBEiJ_G0035077.1 mouse_genomes_project X 97456250 97590835 - MGP_WSBEiJ_P0095638 Phka1 protein_coding protein_coding MGP_WSBEiJ_T0095639.1 MGP_WSBEiJ_G0035077.1 mouse_genomes_project X 97456250 97590835 - MGP_WSBEiJ_P0095639 Phka1 protein_coding protein_coding MGP_WSBEiJ_T0095640.1 MGP_WSBEiJ_G0035077.1 mouse_genomes_project X 97456250 97590835 - MGP_WSBEiJ_P0095640 Phka1 protein_coding protein_coding MGP_WSBEiJ_T0095641.1 MGP_WSBEiJ_G0035077.1 mouse_genomes_project X 97498911 97590835 - Phka1 protein_coding retained_intron MGP_WSBEiJ_T0016006.1 MGP_WSBEiJ_G0014136.1 mouse_genomes_project X 91847165 91847700 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101170.1 MGP_WSBEiJ_G0039627.1 mouse_genomes_project X 149636645 149638914 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0096056.1 MGP_WSBEiJ_G0035223.1 mouse_genomes_project X 134289647 134291430 + MGP_WSBEiJ_P0096056 4933428M09Rik protein_coding protein_coding MGP_WSBEiJ_T0009221.1 MGP_WSBEiJ_G0007413.1 mouse_genomes_project X 16002613 16038318 - lincRNA lincRNA MGP_WSBEiJ_T0005515.1 MGP_WSBEiJ_G0004645.1 mouse_genomes_project X 71210346 71210924 - Gm14707 antisense antisense MGP_WSBEiJ_T0094668.1 MGP_WSBEiJ_G0034827.1 mouse_genomes_project X 47667477 47702057 + MGP_WSBEiJ_P0094668 Hprt protein_coding protein_coding MGP_WSBEiJ_T0016082.1 MGP_WSBEiJ_G0014212.1 mouse_genomes_project X 104039307 104039463 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016000.1 MGP_WSBEiJ_G0014130.1 mouse_genomes_project X 90319153 90321257 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005489.1 MGP_WSBEiJ_G0004626.1 mouse_genomes_project X 2670780 2701351 + Gm14820 antisense antisense MGP_WSBEiJ_T0005490.1 MGP_WSBEiJ_G0004626.1 mouse_genomes_project X 2678329 2688939 + Gm14820 antisense antisense MGP_WSBEiJ_T0005491.1 MGP_WSBEiJ_G0004626.1 mouse_genomes_project X 2678405 2702069 + Gm14820 antisense antisense MGP_WSBEiJ_T0005492.1 MGP_WSBEiJ_G0004626.1 mouse_genomes_project X 2678485 2703729 + Gm14820 antisense antisense MGP_WSBEiJ_T0005493.1 MGP_WSBEiJ_G0004626.1 mouse_genomes_project X 2680719 2702066 + Gm14820 antisense antisense MGP_WSBEiJ_T0015984.1 MGP_WSBEiJ_G0014114.1 mouse_genomes_project X 89229091 89230039 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101149.1 MGP_WSBEiJ_G0039606.1 mouse_genomes_project X 81089778 81092483 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094948.1 MGP_WSBEiJ_G0034924.1 mouse_genomes_project X 68657542 68661338 + MGP_WSBEiJ_P0094948 Ssr4 protein_coding protein_coding MGP_WSBEiJ_T0094949.1 MGP_WSBEiJ_G0034924.1 mouse_genomes_project X 68657576 68661340 + MGP_WSBEiJ_P0094949 Ssr4 protein_coding protein_coding MGP_WSBEiJ_T0094950.1 MGP_WSBEiJ_G0034924.1 mouse_genomes_project X 68657696 68659607 + Ssr4 protein_coding retained_intron MGP_WSBEiJ_T0094951.1 MGP_WSBEiJ_G0034924.1 mouse_genomes_project X 68657698 68660846 + Ssr4 protein_coding retained_intron MGP_WSBEiJ_T0094952.1 MGP_WSBEiJ_G0034924.1 mouse_genomes_project X 68657698 68661340 + Ssr4 protein_coding retained_intron MGP_WSBEiJ_T0094953.1 MGP_WSBEiJ_G0034924.1 mouse_genomes_project X 68657738 68661325 + Ssr4 protein_coding retained_intron MGP_WSBEiJ_T0094954.1 MGP_WSBEiJ_G0034924.1 mouse_genomes_project X 68657779 68660677 + Ssr4 protein_coding retained_intron MGP_WSBEiJ_T0094955.1 MGP_WSBEiJ_G0034924.1 mouse_genomes_project X 68659358 68661344 + Ssr4 protein_coding retained_intron MGP_WSBEiJ_T0016282.1 MGP_WSBEiJ_G0014412.1 mouse_genomes_project X 149042102 149042868 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002433.1 MGP_WSBEiJ_G0002349.1 mouse_genomes_project X 68258570 68259826 + TEC TEC MGP_WSBEiJ_T0011029.1 MGP_WSBEiJ_G0009186.1 mouse_genomes_project X 142256657 142256755 + Mir1298 miRNA miRNA MGP_WSBEiJ_T0016321.1 MGP_WSBEiJ_G0014451.1 mouse_genomes_project X 156743971 156744575 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015828.1 MGP_WSBEiJ_G0013958.1 mouse_genomes_project X 55704992 55705567 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015950.1 MGP_WSBEiJ_G0014080.1 mouse_genomes_project X 83533792 83533984 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096089.1 MGP_WSBEiJ_G0035233.1 mouse_genomes_project X 135043849 135163956 - MGP_WSBEiJ_P0096089 Rbm41 protein_coding protein_coding MGP_WSBEiJ_T0096090.1 MGP_WSBEiJ_G0035233.1 mouse_genomes_project X 135097437 135163918 - MGP_WSBEiJ_P0096090 Rbm41 protein_coding protein_coding MGP_WSBEiJ_T0096091.1 MGP_WSBEiJ_G0035233.1 mouse_genomes_project X 135097469 135163903 - MGP_WSBEiJ_P0096091 Rbm41 protein_coding protein_coding MGP_WSBEiJ_T0096092.1 MGP_WSBEiJ_G0035233.1 mouse_genomes_project X 135098300 135163912 - MGP_WSBEiJ_P0096092 Rbm41 protein_coding protein_coding MGP_WSBEiJ_T0096093.1 MGP_WSBEiJ_G0035233.1 mouse_genomes_project X 135115919 135159443 - Rbm41 protein_coding retained_intron MGP_WSBEiJ_T0096094.1 MGP_WSBEiJ_G0035233.1 mouse_genomes_project X 135116585 135163897 - Rbm41 protein_coding processed_transcript MGP_WSBEiJ_T0096095.1 MGP_WSBEiJ_G0035233.1 mouse_genomes_project X 135157717 135163927 - Rbm41 protein_coding retained_intron MGP_WSBEiJ_T0095174.1 MGP_WSBEiJ_G0034951.1 mouse_genomes_project X 69315760 69335628 - MGP_WSBEiJ_P0095174 G6pdx protein_coding protein_coding MGP_WSBEiJ_T0095175.1 MGP_WSBEiJ_G0034951.1 mouse_genomes_project X 69317136 69335310 - MGP_WSBEiJ_P0095175 G6pdx protein_coding protein_coding MGP_WSBEiJ_T0095176.1 MGP_WSBEiJ_G0034951.1 mouse_genomes_project X 69320081 69335283 - G6pdx protein_coding processed_transcript MGP_WSBEiJ_T0095183.1 MGP_WSBEiJ_G0034951.1 mouse_genomes_project X 69334118 69335314 - G6pdx protein_coding retained_intron MGP_WSBEiJ_T0015701.1 MGP_WSBEiJ_G0013831.1 mouse_genomes_project X 12419762 12421617 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094373.1 MGP_WSBEiJ_G0034721.1 mouse_genomes_project X 15859634 15860892 - MGP_WSBEiJ_P0094373 Gm21876 protein_coding protein_coding MGP_WSBEiJ_T0095438.1 MGP_WSBEiJ_G0035030.1 mouse_genomes_project X 91635430 91638499 + Gpr165 protein_coding retained_intron MGP_WSBEiJ_T0095439.1 MGP_WSBEiJ_G0035030.1 mouse_genomes_project X 91635481 91641359 + MGP_WSBEiJ_P0095439 Gpr165 protein_coding protein_coding MGP_WSBEiJ_T0095440.1 MGP_WSBEiJ_G0035030.1 mouse_genomes_project X 91635502 91637764 + Gpr165 protein_coding retained_intron MGP_WSBEiJ_T0095441.1 MGP_WSBEiJ_G0035030.1 mouse_genomes_project X 91636175 91641253 + Gpr165 protein_coding retained_intron MGP_WSBEiJ_T0095428.1 MGP_WSBEiJ_G0035028.1 mouse_genomes_project X 91249669 91375593 - MGP_WSBEiJ_P0095428 Hsf3 protein_coding protein_coding MGP_WSBEiJ_T0095429.1 MGP_WSBEiJ_G0035028.1 mouse_genomes_project X 91250358 91298553 - MGP_WSBEiJ_P0095429 Hsf3 protein_coding protein_coding MGP_WSBEiJ_T0095430.1 MGP_WSBEiJ_G0035028.1 mouse_genomes_project X 91250798 91375582 - MGP_WSBEiJ_P0095430 Hsf3 protein_coding protein_coding MGP_WSBEiJ_T0095431.1 MGP_WSBEiJ_G0035028.1 mouse_genomes_project X 91250956 91310203 - MGP_WSBEiJ_P0095431 Hsf3 protein_coding protein_coding MGP_WSBEiJ_T0095432.1 MGP_WSBEiJ_G0035028.1 mouse_genomes_project X 91265825 91285009 - Hsf3 protein_coding retained_intron MGP_WSBEiJ_T0009268.1 MGP_WSBEiJ_G0007442.1 mouse_genomes_project X 108072538 108099095 - Gm14936 lincRNA lincRNA MGP_WSBEiJ_T0016207.1 MGP_WSBEiJ_G0014337.1 mouse_genomes_project X 134374676 134375286 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015804.1 MGP_WSBEiJ_G0013934.1 mouse_genomes_project X 50650790 50651670 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096351.1 MGP_WSBEiJ_G0035288.1 mouse_genomes_project X 147921875 147922511 + MGP_WSBEiJ_P0096351 Cldn34a protein_coding protein_coding MGP_WSBEiJ_T0094209.1 MGP_WSBEiJ_G0034676.1 mouse_genomes_project X 4777807 4860412 - MGP_WSBEiJ_P0094209 Srpx protein_coding protein_coding MGP_WSBEiJ_T0094210.1 MGP_WSBEiJ_G0034676.1 mouse_genomes_project X 4778385 4860439 - MGP_WSBEiJ_P0094210 Srpx protein_coding protein_coding MGP_WSBEiJ_T0094211.1 MGP_WSBEiJ_G0034676.1 mouse_genomes_project X 4778736 4860335 - MGP_WSBEiJ_P0094211 Srpx protein_coding protein_coding MGP_WSBEiJ_T0094212.1 MGP_WSBEiJ_G0034676.1 mouse_genomes_project X 4814052 4860406 - Srpx protein_coding processed_transcript MGP_WSBEiJ_T0094351.1 MGP_WSBEiJ_G0034714.1 mouse_genomes_project X 15613184 15619282 - MGP_WSBEiJ_P0094351 Cfp protein_coding protein_coding MGP_WSBEiJ_T0094352.1 MGP_WSBEiJ_G0034714.1 mouse_genomes_project X 15613381 15615345 - Cfp protein_coding processed_transcript MGP_WSBEiJ_T0015788.1 MGP_WSBEiJ_G0013918.1 mouse_genomes_project X 45829565 45830002 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100339.1 MGP_WSBEiJ_G0038824.1 mouse_genomes_project X 146151350 146183025 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100340.1 MGP_WSBEiJ_G0038824.1 mouse_genomes_project X 146175544 146177768 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100341.1 MGP_WSBEiJ_G0038824.1 mouse_genomes_project X 146179157 146183138 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0015958.1 MGP_WSBEiJ_G0014088.1 mouse_genomes_project X 84231465 84232186 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016251.1 MGP_WSBEiJ_G0014381.1 mouse_genomes_project X 140803187 140803652 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016153.1 MGP_WSBEiJ_G0014283.1 mouse_genomes_project X 121956567 121956822 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015865.1 MGP_WSBEiJ_G0013995.1 mouse_genomes_project X 62815428 62815731 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094879.1 MGP_WSBEiJ_G0034904.1 mouse_genomes_project X 67770532 67797954 + MGP_WSBEiJ_P0094879 Nsdhl protein_coding protein_coding MGP_WSBEiJ_T0094880.1 MGP_WSBEiJ_G0034904.1 mouse_genomes_project X 67782666 67793095 + Nsdhl protein_coding retained_intron MGP_WSBEiJ_T0095354.1 MGP_WSBEiJ_G0035010.1 mouse_genomes_project X 88652160 88722259 - MGP_WSBEiJ_P0095354 Pdk3 protein_coding protein_coding MGP_WSBEiJ_T0095355.1 MGP_WSBEiJ_G0035010.1 mouse_genomes_project X 88652649 88660268 - Pdk3 protein_coding processed_transcript MGP_WSBEiJ_T0095356.1 MGP_WSBEiJ_G0035010.1 mouse_genomes_project X 88672569 88679685 - Pdk3 protein_coding processed_transcript MGP_WSBEiJ_T0096262.1 MGP_WSBEiJ_G0035274.1 mouse_genomes_project X 146313884 146351089 - MGP_WSBEiJ_P0096262 Gnl3l protein_coding protein_coding MGP_WSBEiJ_T0096263.1 MGP_WSBEiJ_G0035274.1 mouse_genomes_project X 146313884 146351089 - MGP_WSBEiJ_P0096263 Gnl3l protein_coding protein_coding MGP_WSBEiJ_T0096264.1 MGP_WSBEiJ_G0035274.1 mouse_genomes_project X 146318559 146324687 - Gnl3l protein_coding retained_intron MGP_WSBEiJ_T0096265.1 MGP_WSBEiJ_G0035274.1 mouse_genomes_project X 146328563 146331449 - Gnl3l protein_coding retained_intron MGP_WSBEiJ_T0096266.1 MGP_WSBEiJ_G0035274.1 mouse_genomes_project X 146328933 146351089 - MGP_WSBEiJ_P0096266 Gnl3l protein_coding protein_coding MGP_WSBEiJ_T0096267.1 MGP_WSBEiJ_G0035274.1 mouse_genomes_project X 146333879 146351089 - MGP_WSBEiJ_P0096267 Gnl3l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096268.1 MGP_WSBEiJ_G0035274.1 mouse_genomes_project X 146333923 146351089 - MGP_WSBEiJ_P0096268 Gnl3l protein_coding protein_coding MGP_WSBEiJ_T0098706.1 MGP_WSBEiJ_G0037369.1 mouse_genomes_project X 135861433 135861540 + Gm23199 snRNA snRNA MGP_WSBEiJ_T0096578.1 MGP_WSBEiJ_G0035350.1 mouse_genomes_project X 159976988 159999071 + MGP_WSBEiJ_P0096578 Asb11 protein_coding protein_coding MGP_WSBEiJ_T0096579.1 MGP_WSBEiJ_G0035350.1 mouse_genomes_project X 159977004 159986992 + Asb11 protein_coding retained_intron MGP_WSBEiJ_T0096580.1 MGP_WSBEiJ_G0035350.1 mouse_genomes_project X 159977048 159999075 + MGP_WSBEiJ_P0096580 Asb11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009235.1 MGP_WSBEiJ_G0007423.1 mouse_genomes_project X 62273406 62274173 + 1700036O09Rik lincRNA lincRNA MGP_WSBEiJ_T0015727.1 MGP_WSBEiJ_G0013857.1 mouse_genomes_project X 30465994 30467227 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099907.1 MGP_WSBEiJ_G0038570.1 mouse_genomes_project X 46479241 46479358 + Gm22539 snoRNA snoRNA MGP_WSBEiJ_T0095660.1 MGP_WSBEiJ_G0035090.1 mouse_genomes_project X 98775454 98909172 - MGP_WSBEiJ_P0095660 Slc16a2 protein_coding protein_coding MGP_WSBEiJ_T0095661.1 MGP_WSBEiJ_G0035090.1 mouse_genomes_project X 98777908 98784512 - Slc16a2 protein_coding retained_intron MGP_WSBEiJ_T0095662.1 MGP_WSBEiJ_G0035090.1 mouse_genomes_project X 98784441 98812753 - Slc16a2 protein_coding processed_transcript MGP_WSBEiJ_T0095845.1 MGP_WSBEiJ_G0035151.1 mouse_genomes_project X 122043447 122068122 + MGP_WSBEiJ_P0095845 Gm382 protein_coding protein_coding MGP_WSBEiJ_T0015823.1 MGP_WSBEiJ_G0013953.1 mouse_genomes_project X 55432120 55432951 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099920.1 MGP_WSBEiJ_G0038583.1 mouse_genomes_project X 73417091 73417225 - Gm22843 snoRNA snoRNA MGP_WSBEiJ_T0016152.1 MGP_WSBEiJ_G0014282.1 mouse_genomes_project X 121909088 121911125 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098668.1 MGP_WSBEiJ_G0037331.1 mouse_genomes_project X 51590440 51590605 + Gm26312 snRNA snRNA MGP_WSBEiJ_T0015807.1 MGP_WSBEiJ_G0013937.1 mouse_genomes_project X 50650843 50651670 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095994.1 MGP_WSBEiJ_G0035198.1 mouse_genomes_project X 131281232 131283291 + MGP_WSBEiJ_P0095994 Tceal7 protein_coding protein_coding MGP_WSBEiJ_T0096371.1 MGP_WSBEiJ_G0035297.1 mouse_genomes_project X 149070259 149081486 - MGP_WSBEiJ_P0096371 Kctd12b protein_coding protein_coding MGP_WSBEiJ_T0096372.1 MGP_WSBEiJ_G0035297.1 mouse_genomes_project X 149070259 149081375 - MGP_WSBEiJ_P0096372 Kctd12b protein_coding protein_coding MGP_WSBEiJ_T0095795.1 MGP_WSBEiJ_G0035131.1 mouse_genomes_project X 107353753 107358545 + MGP_WSBEiJ_P0095795 4933403O08Rik protein_coding protein_coding MGP_WSBEiJ_T0095796.1 MGP_WSBEiJ_G0035131.1 mouse_genomes_project X 107355166 107358545 + MGP_WSBEiJ_P0095796 4933403O08Rik protein_coding protein_coding MGP_WSBEiJ_T0095797.1 MGP_WSBEiJ_G0035131.1 mouse_genomes_project X 107355275 107358472 + MGP_WSBEiJ_P0095797 4933403O08Rik protein_coding protein_coding MGP_WSBEiJ_T0016289.1 MGP_WSBEiJ_G0014419.1 mouse_genomes_project X 150651377 150652079 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016105.1 MGP_WSBEiJ_G0014235.1 mouse_genomes_project X 108318399 108320179 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096545.1 MGP_WSBEiJ_G0035341.1 mouse_genomes_project X 159463040 159486650 - MGP_WSBEiJ_P0096545 Zrsr2 protein_coding protein_coding MGP_WSBEiJ_T0096546.1 MGP_WSBEiJ_G0035341.1 mouse_genomes_project X 159467145 159478282 - Zrsr2 protein_coding retained_intron MGP_WSBEiJ_T0096547.1 MGP_WSBEiJ_G0035341.1 mouse_genomes_project X 159468048 159471578 - Zrsr2 protein_coding retained_intron MGP_WSBEiJ_T0096548.1 MGP_WSBEiJ_G0035341.1 mouse_genomes_project X 159477004 159478524 - Zrsr2 protein_coding retained_intron MGP_WSBEiJ_T0096549.1 MGP_WSBEiJ_G0035341.1 mouse_genomes_project X 159478451 159486659 - MGP_WSBEiJ_P0096549 Zrsr2 protein_coding protein_coding MGP_WSBEiJ_T0096550.1 MGP_WSBEiJ_G0035341.1 mouse_genomes_project X 159481658 159486223 - Zrsr2 protein_coding processed_transcript MGP_WSBEiJ_T0096551.1 MGP_WSBEiJ_G0035341.1 mouse_genomes_project X 159481707 159486613 - MGP_WSBEiJ_P0096551 Zrsr2 protein_coding protein_coding MGP_WSBEiJ_T0096552.1 MGP_WSBEiJ_G0035341.1 mouse_genomes_project X 159484539 159486722 - MGP_WSBEiJ_P0096552 Zrsr2 protein_coding protein_coding MGP_WSBEiJ_T0096252.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146128249 146136231 - MGP_WSBEiJ_P0096252 Maged2 protein_coding protein_coding MGP_WSBEiJ_T0096253.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146128300 146134853 - Maged2 protein_coding retained_intron MGP_WSBEiJ_T0096254.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146128300 146135593 - MGP_WSBEiJ_P0096254 Maged2 protein_coding protein_coding MGP_WSBEiJ_T0096255.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146128303 146136155 - MGP_WSBEiJ_P0096255 Maged2 protein_coding protein_coding MGP_WSBEiJ_T0096256.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146128596 146134600 - MGP_WSBEiJ_P0096256 Maged2 protein_coding protein_coding MGP_WSBEiJ_T0096257.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146132760 146134964 - MGP_WSBEiJ_P0096257 Maged2 protein_coding protein_coding MGP_WSBEiJ_T0096258.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146132777 146135040 - MGP_WSBEiJ_P0096258 Maged2 protein_coding protein_coding MGP_WSBEiJ_T0096259.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146132986 146134348 - Maged2 protein_coding processed_transcript MGP_WSBEiJ_T0096260.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146133024 146136167 - MGP_WSBEiJ_P0096260 Maged2 protein_coding protein_coding MGP_WSBEiJ_T0096261.1 MGP_WSBEiJ_G0035273.1 mouse_genomes_project X 146133761 146134843 - MGP_WSBEiJ_P0096261 Maged2 protein_coding protein_coding MGP_WSBEiJ_T0096133.1 MGP_WSBEiJ_G0035248.1 mouse_genomes_project X 137089051 137090674 - Gm15294 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0096134.1 MGP_WSBEiJ_G0035248.1 mouse_genomes_project X 137089974 137090309 - MGP_WSBEiJ_P0096134 Gm15294 protein_coding protein_coding MGP_WSBEiJ_T0094455.1 MGP_WSBEiJ_G0034760.1 mouse_genomes_project X 32250421 32251769 + MGP_WSBEiJ_P0094455 protein_coding protein_coding MGP_WSBEiJ_T0016149.1 MGP_WSBEiJ_G0014279.1 mouse_genomes_project X 117741512 117742241 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016046.1 MGP_WSBEiJ_G0014176.1 mouse_genomes_project X 98545591 98546046 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011009.1 MGP_WSBEiJ_G0009166.1 mouse_genomes_project X 99220018 99220118 - Mir672 miRNA miRNA MGP_WSBEiJ_T0095984.1 MGP_WSBEiJ_G0035192.1 mouse_genomes_project X 131082270 131083856 + MGP_WSBEiJ_P0095984 protein_coding protein_coding MGP_WSBEiJ_T0016120.1 MGP_WSBEiJ_G0014250.1 mouse_genomes_project X 111913645 111913948 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101142.1 MGP_WSBEiJ_G0039599.1 mouse_genomes_project X 69778134 69778272 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016117.1 MGP_WSBEiJ_G0014247.1 mouse_genomes_project X 110713668 110714058 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095609.1 MGP_WSBEiJ_G0035070.1 mouse_genomes_project X 96770080 96873002 + Nhsl2 protein_coding processed_transcript MGP_WSBEiJ_T0095610.1 MGP_WSBEiJ_G0035070.1 mouse_genomes_project X 96770080 97005151 + MGP_WSBEiJ_P0095610 Nhsl2 protein_coding protein_coding MGP_WSBEiJ_T0095611.1 MGP_WSBEiJ_G0035070.1 mouse_genomes_project X 96770080 97021502 + MGP_WSBEiJ_P0095611 Nhsl2 protein_coding protein_coding MGP_WSBEiJ_T0095612.1 MGP_WSBEiJ_G0035070.1 mouse_genomes_project X 96885163 97006756 + Nhsl2 protein_coding processed_transcript MGP_WSBEiJ_T0095613.1 MGP_WSBEiJ_G0035070.1 mouse_genomes_project X 96930800 97006731 + MGP_WSBEiJ_P0095613 Nhsl2 protein_coding protein_coding MGP_WSBEiJ_T0095614.1 MGP_WSBEiJ_G0035070.1 mouse_genomes_project X 96979362 97000840 + Nhsl2 protein_coding processed_transcript MGP_WSBEiJ_T0095618.1 MGP_WSBEiJ_G0035070.1 mouse_genomes_project X 97001816 97009175 + Nhsl2 protein_coding processed_transcript MGP_WSBEiJ_T0098647.1 MGP_WSBEiJ_G0037310.1 mouse_genomes_project X 2713926 2714028 + Gm22083 snRNA snRNA MGP_WSBEiJ_T0095892.1 MGP_WSBEiJ_G0035166.1 mouse_genomes_project X 129268286 129278910 + MGP_WSBEiJ_P0095892 Tmem35a protein_coding protein_coding MGP_WSBEiJ_T0094458.1 MGP_WSBEiJ_G0034763.1 mouse_genomes_project X 32453792 32457815 + MGP_WSBEiJ_P0094458 Rhox5 protein_coding protein_coding MGP_WSBEiJ_T0094459.1 MGP_WSBEiJ_G0034763.1 mouse_genomes_project X 32453801 32457703 + MGP_WSBEiJ_P0094459 Rhox5 protein_coding protein_coding MGP_WSBEiJ_T0015878.1 MGP_WSBEiJ_G0014008.1 mouse_genomes_project X 65441531 65442076 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015848.1 MGP_WSBEiJ_G0013978.1 mouse_genomes_project X 58266611 58266913 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016074.1 MGP_WSBEiJ_G0014204.1 mouse_genomes_project X 101974855 101975147 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094081.1 MGP_WSBEiJ_G0034631.1 mouse_genomes_project X 2437196 2453128 + MGP_WSBEiJ_P0094081 Kcnd1 protein_coding protein_coding MGP_WSBEiJ_T0094082.1 MGP_WSBEiJ_G0034631.1 mouse_genomes_project X 2437214 2438175 + Kcnd1 protein_coding processed_transcript MGP_WSBEiJ_T0016196.1 MGP_WSBEiJ_G0014326.1 mouse_genomes_project X 132231592 132232179 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094858.1 MGP_WSBEiJ_G0034895.1 mouse_genomes_project X 66819974 66823993 + MGP_WSBEiJ_P0094858 Prrg3 protein_coding protein_coding MGP_WSBEiJ_T0094859.1 MGP_WSBEiJ_G0034895.1 mouse_genomes_project X 66819975 66827440 + MGP_WSBEiJ_P0094859 Prrg3 protein_coding protein_coding MGP_WSBEiJ_T0094860.1 MGP_WSBEiJ_G0034895.1 mouse_genomes_project X 66820332 66830088 + MGP_WSBEiJ_P0094860 Prrg3 protein_coding protein_coding MGP_WSBEiJ_T0094538.1 MGP_WSBEiJ_G0034784.1 mouse_genomes_project X 37165680 37167514 + MGP_WSBEiJ_P0094538 Gm43337 protein_coding protein_coding MGP_WSBEiJ_T0097153.1 MGP_WSBEiJ_G0035834.1 mouse_genomes_project X 151002882 151003001 + n-R5s16 rRNA rRNA MGP_WSBEiJ_T0016150.1 MGP_WSBEiJ_G0014280.1 mouse_genomes_project X 121315113 121315776 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094958.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68727344 68743434 - MGP_WSBEiJ_P0094958 L1cam protein_coding protein_coding MGP_WSBEiJ_T0094959.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68727521 68754146 - MGP_WSBEiJ_P0094959 L1cam protein_coding protein_coding MGP_WSBEiJ_T0094960.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68728224 68743333 - MGP_WSBEiJ_P0094960 L1cam protein_coding protein_coding MGP_WSBEiJ_T0094961.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68728451 68729947 - L1cam protein_coding retained_intron MGP_WSBEiJ_T0094962.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68728557 68730315 - MGP_WSBEiJ_P0094962 L1cam protein_coding protein_coding MGP_WSBEiJ_T0094963.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68729977 68731217 - L1cam protein_coding retained_intron MGP_WSBEiJ_T0094964.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68730231 68730967 - L1cam protein_coding retained_intron MGP_WSBEiJ_T0094965.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68731034 68732186 - L1cam protein_coding retained_intron MGP_WSBEiJ_T0094966.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68732625 68733708 - L1cam protein_coding retained_intron MGP_WSBEiJ_T0094967.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68732978 68734676 - MGP_WSBEiJ_P0094967 L1cam protein_coding protein_coding MGP_WSBEiJ_T0094968.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68737265 68754107 - L1cam protein_coding retained_intron MGP_WSBEiJ_T0094969.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68739211 68770891 - L1cam protein_coding processed_transcript MGP_WSBEiJ_T0094970.1 MGP_WSBEiJ_G0034926.1 mouse_genomes_project X 68739288 68743815 - MGP_WSBEiJ_P0094970 L1cam protein_coding protein_coding MGP_WSBEiJ_T0095489.1 MGP_WSBEiJ_G0035043.1 mouse_genomes_project X 95313837 95314710 + MGP_WSBEiJ_P0095489 Otud6a protein_coding protein_coding MGP_WSBEiJ_T0015932.1 MGP_WSBEiJ_G0014062.1 mouse_genomes_project X 79941383 79942498 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016242.1 MGP_WSBEiJ_G0014372.1 mouse_genomes_project X 139475081 139475237 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015977.1 MGP_WSBEiJ_G0014107.1 mouse_genomes_project X 88406962 88409699 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016135.1 MGP_WSBEiJ_G0014265.1 mouse_genomes_project X 114979735 114981025 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011584.1 MGP_WSBEiJ_G0009741.1 mouse_genomes_project X 158177432 158177733 + Gm22257 misc_RNA misc_RNA MGP_WSBEiJ_T0011024.1 MGP_WSBEiJ_G0009181.1 mouse_genomes_project X 140244508 140244579 + Mir3472 miRNA miRNA MGP_WSBEiJ_T0094293.1 MGP_WSBEiJ_G0034700.1 mouse_genomes_project X 13161155 13209517 - 4930578C19Rik protein_coding processed_transcript MGP_WSBEiJ_T0094294.1 MGP_WSBEiJ_G0034700.1 mouse_genomes_project X 13164706 13209491 - MGP_WSBEiJ_P0094294 4930578C19Rik protein_coding protein_coding MGP_WSBEiJ_T0096563.1 MGP_WSBEiJ_G0035346.1 mouse_genomes_project X 159729769 159798208 - MGP_WSBEiJ_P0096563 Bmx protein_coding protein_coding MGP_WSBEiJ_T0096564.1 MGP_WSBEiJ_G0035346.1 mouse_genomes_project X 159730282 159790390 - MGP_WSBEiJ_P0096564 Bmx protein_coding protein_coding MGP_WSBEiJ_T0015885.1 MGP_WSBEiJ_G0014015.1 mouse_genomes_project X 68166486 68166918 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095137.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69230668 69233846 + Plxna3 protein_coding processed_transcript MGP_WSBEiJ_T0095138.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69230668 69246288 + MGP_WSBEiJ_P0095138 Plxna3 protein_coding protein_coding MGP_WSBEiJ_T0095139.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69234059 69246282 + Plxna3 protein_coding retained_intron MGP_WSBEiJ_T0095140.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69235348 69236306 + Plxna3 protein_coding retained_intron MGP_WSBEiJ_T0095141.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69235928 69237438 + Plxna3 protein_coding retained_intron MGP_WSBEiJ_T0095142.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69236834 69237935 + Plxna3 protein_coding retained_intron MGP_WSBEiJ_T0095143.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69239864 69240915 + Plxna3 protein_coding retained_intron MGP_WSBEiJ_T0095144.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69239947 69240758 + Plxna3 protein_coding retained_intron MGP_WSBEiJ_T0095145.1 MGP_WSBEiJ_G0034945.1 mouse_genomes_project X 69243185 69245544 + Plxna3 protein_coding retained_intron MGP_WSBEiJ_T0094158.1 MGP_WSBEiJ_G0034650.1 mouse_genomes_project X 2827998 2843018 - MGP_WSBEiJ_P0094158 Porcn protein_coding protein_coding MGP_WSBEiJ_T0094159.1 MGP_WSBEiJ_G0034650.1 mouse_genomes_project X 2827999 2842984 - MGP_WSBEiJ_P0094159 Porcn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094160.1 MGP_WSBEiJ_G0034650.1 mouse_genomes_project X 2828000 2842994 - MGP_WSBEiJ_P0094160 Porcn protein_coding protein_coding MGP_WSBEiJ_T0094161.1 MGP_WSBEiJ_G0034650.1 mouse_genomes_project X 2828000 2842994 - MGP_WSBEiJ_P0094161 Porcn protein_coding protein_coding MGP_WSBEiJ_T0094162.1 MGP_WSBEiJ_G0034650.1 mouse_genomes_project X 2828000 2842994 - MGP_WSBEiJ_P0094162 Porcn protein_coding protein_coding MGP_WSBEiJ_T0094163.1 MGP_WSBEiJ_G0034650.1 mouse_genomes_project X 2828003 2842990 - MGP_WSBEiJ_P0094163 Porcn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094164.1 MGP_WSBEiJ_G0034650.1 mouse_genomes_project X 2839930 2843006 - Porcn protein_coding retained_intron MGP_WSBEiJ_T0015798.1 MGP_WSBEiJ_G0013928.1 mouse_genomes_project X 48007345 48007979 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015973.1 MGP_WSBEiJ_G0014103.1 mouse_genomes_project X 86775395 86776430 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095333.1 MGP_WSBEiJ_G0034998.1 mouse_genomes_project X 84199774 84205042 - MGP_WSBEiJ_P0095333 Pet2 protein_coding protein_coding MGP_WSBEiJ_T0095334.1 MGP_WSBEiJ_G0034998.1 mouse_genomes_project X 84199774 84205042 - MGP_WSBEiJ_P0095334 Pet2 protein_coding protein_coding MGP_WSBEiJ_T0096135.1 MGP_WSBEiJ_G0035249.1 mouse_genomes_project X 137296389 137402085 - MGP_WSBEiJ_P0096135 Gucy2f protein_coding protein_coding MGP_WSBEiJ_T0096136.1 MGP_WSBEiJ_G0035249.1 mouse_genomes_project X 137299795 137402276 - MGP_WSBEiJ_P0096136 Gucy2f protein_coding unknown_likely_coding MGP_WSBEiJ_T0011008.1 MGP_WSBEiJ_G0009165.1 mouse_genomes_project X 99178347 99178438 + Gm24993 miRNA miRNA MGP_WSBEiJ_T0098682.1 MGP_WSBEiJ_G0037345.1 mouse_genomes_project X 87753920 87754025 + Gm25332 snRNA snRNA MGP_WSBEiJ_T0098700.1 MGP_WSBEiJ_G0037363.1 mouse_genomes_project X 122328933 122329038 + Gm22139 snRNA snRNA MGP_WSBEiJ_T0099922.1 MGP_WSBEiJ_G0038585.1 mouse_genomes_project X 77333707 77333839 - Gm24470 snoRNA snoRNA MGP_WSBEiJ_T0098718.1 MGP_WSBEiJ_G0037381.1 mouse_genomes_project X 158355446 158355553 - Gm23901 snRNA snRNA MGP_WSBEiJ_T0095679.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100911814 101039778 - MGP_WSBEiJ_P0095679 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095680.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100914616 100916250 - Atrx protein_coding retained_intron MGP_WSBEiJ_T0095681.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100915949 100917999 - Atrx protein_coding retained_intron MGP_WSBEiJ_T0095682.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100933065 100940864 - MGP_WSBEiJ_P0095682 Atrx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095683.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100933091 100944395 - Atrx protein_coding processed_transcript MGP_WSBEiJ_T0095684.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100940882 100953018 - MGP_WSBEiJ_P0095684 Atrx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095685.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100952770 100961247 - Atrx protein_coding retained_intron MGP_WSBEiJ_T0095686.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100953125 100961431 - Atrx protein_coding retained_intron MGP_WSBEiJ_T0095687.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100960857 100966089 - Atrx protein_coding retained_intron MGP_WSBEiJ_T0095688.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100961210 100965806 - Atrx protein_coding retained_intron MGP_WSBEiJ_T0095689.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100965716 100989401 - Atrx protein_coding retained_intron MGP_WSBEiJ_T0095690.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100966269 100989732 - MGP_WSBEiJ_P0095690 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095691.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100970869 101001978 - MGP_WSBEiJ_P0095691 Atrx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095692.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100979735 100989442 - MGP_WSBEiJ_P0095692 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095693.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100989266 101039741 - MGP_WSBEiJ_P0095693 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095694.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100990644 101039717 - MGP_WSBEiJ_P0095694 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095695.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100991096 101039725 - MGP_WSBEiJ_P0095695 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095696.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100991096 101039745 - MGP_WSBEiJ_P0095696 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095697.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100991376 101039742 - MGP_WSBEiJ_P0095697 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095698.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100991577 101039734 - MGP_WSBEiJ_P0095698 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095699.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100991616 101039722 - MGP_WSBEiJ_P0095699 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095700.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100992569 100994588 - Atrx protein_coding retained_intron MGP_WSBEiJ_T0095701.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100992589 101039610 - MGP_WSBEiJ_P0095701 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095702.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100996155 101039009 - MGP_WSBEiJ_P0095702 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095703.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 100998510 101039678 - MGP_WSBEiJ_P0095703 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095704.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 101001935 101039772 - MGP_WSBEiJ_P0095704 Atrx protein_coding protein_coding MGP_WSBEiJ_T0095705.1 MGP_WSBEiJ_G0035100.1 mouse_genomes_project X 101014061 101039721 - Atrx protein_coding processed_transcript MGP_WSBEiJ_T0095342.1 MGP_WSBEiJ_G0035006.1 mouse_genomes_project X 87012307 87477688 - MGP_WSBEiJ_P0095342 Mageb18 protein_coding protein_coding MGP_WSBEiJ_T0095343.1 MGP_WSBEiJ_G0035006.1 mouse_genomes_project X 87012629 87014200 - MGP_WSBEiJ_P0095343 Mageb18 protein_coding protein_coding MGP_WSBEiJ_T0094724.1 MGP_WSBEiJ_G0034851.1 mouse_genomes_project X 51921531 51927217 + MGP_WSBEiJ_P0094724 Brs3 protein_coding protein_coding MGP_WSBEiJ_T0096022.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132105848 132164452 - MGP_WSBEiJ_P0096022 Slc25a53 protein_coding protein_coding MGP_WSBEiJ_T0096023.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132105854 132164430 - MGP_WSBEiJ_P0096023 Slc25a53 protein_coding protein_coding MGP_WSBEiJ_T0096024.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132105854 132118948 - MGP_WSBEiJ_P0096024 Slc25a53 protein_coding protein_coding MGP_WSBEiJ_T0096025.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132107619 132118973 - MGP_WSBEiJ_P0096025 Slc25a53 protein_coding protein_coding MGP_WSBEiJ_T0096026.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132107761 132119005 - MGP_WSBEiJ_P0096026 Slc25a53 protein_coding protein_coding MGP_WSBEiJ_T0096031.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132126918 132156264 - Slc25a53 protein_coding retained_intron MGP_WSBEiJ_T0096032.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132126956 132164454 - Slc25a53 protein_coding processed_transcript MGP_WSBEiJ_T0096033.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132128629 132164184 - Slc25a53 protein_coding processed_transcript MGP_WSBEiJ_T0096034.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132128630 132164424 - Slc25a53 protein_coding processed_transcript MGP_WSBEiJ_T0096035.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132129398 132143233 - Slc25a53 protein_coding processed_transcript MGP_WSBEiJ_T0096036.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132140734 132164451 - Slc25a53 protein_coding processed_transcript MGP_WSBEiJ_T0096037.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132156186 132164176 - Slc25a53 protein_coding processed_transcript MGP_WSBEiJ_T0096038.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132157977 132164454 - Slc25a53 protein_coding retained_intron MGP_WSBEiJ_T0096039.1 MGP_WSBEiJ_G0035213.1 mouse_genomes_project X 132158587 132164160 - Slc25a53 protein_coding processed_transcript MGP_WSBEiJ_T0005536.1 MGP_WSBEiJ_G0004659.1 mouse_genomes_project X 155921568 155933749 - Gm15241 antisense antisense MGP_WSBEiJ_T0096153.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138729327 139018513 + MGP_WSBEiJ_P0096153 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096154.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138729434 138982506 + MGP_WSBEiJ_P0096154 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096155.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138876060 139018513 + MGP_WSBEiJ_P0096155 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096156.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138876143 138906093 + MGP_WSBEiJ_P0096156 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096157.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138876161 138929494 + MGP_WSBEiJ_P0096157 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096158.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138876296 138948346 + MGP_WSBEiJ_P0096158 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096159.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138876349 139018513 + MGP_WSBEiJ_P0096159 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096160.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138877510 139018513 + MGP_WSBEiJ_P0096160 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096161.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138877510 139018513 + MGP_WSBEiJ_P0096161 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0096162.1 MGP_WSBEiJ_G0035257.1 mouse_genomes_project X 138905994 139018517 + MGP_WSBEiJ_P0096162 Pak3 protein_coding protein_coding MGP_WSBEiJ_T0098654.1 MGP_WSBEiJ_G0037317.1 mouse_genomes_project X 14450115 14450222 - Gm23678 snRNA snRNA MGP_WSBEiJ_T0099956.1 MGP_WSBEiJ_G0038619.1 mouse_genomes_project X 165183810 165183929 - Gm25651 snoRNA snoRNA MGP_WSBEiJ_T0094643.1 MGP_WSBEiJ_G0034817.1 mouse_genomes_project X 45491919 45544524 - MGP_WSBEiJ_P0094643 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094644.1 MGP_WSBEiJ_G0034817.1 mouse_genomes_project X 45494566 45543897 - MGP_WSBEiJ_P0094644 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096516.1 MGP_WSBEiJ_G0035334.1 mouse_genomes_project X 158271554 158312729 - Txlng protein_coding retained_intron MGP_WSBEiJ_T0096517.1 MGP_WSBEiJ_G0035334.1 mouse_genomes_project X 158271554 158332907 - MGP_WSBEiJ_P0096517 Txlng protein_coding protein_coding MGP_WSBEiJ_T0096518.1 MGP_WSBEiJ_G0035334.1 mouse_genomes_project X 158271554 158332907 - MGP_WSBEiJ_P0096518 Txlng protein_coding protein_coding MGP_WSBEiJ_T0096519.1 MGP_WSBEiJ_G0035334.1 mouse_genomes_project X 158284417 158312782 - MGP_WSBEiJ_P0096519 Txlng protein_coding protein_coding MGP_WSBEiJ_T0096520.1 MGP_WSBEiJ_G0035334.1 mouse_genomes_project X 158284418 158332907 - MGP_WSBEiJ_P0096520 Txlng protein_coding protein_coding MGP_WSBEiJ_T0096521.1 MGP_WSBEiJ_G0035334.1 mouse_genomes_project X 158331512 158332907 - Txlng protein_coding processed_transcript MGP_WSBEiJ_T0094618.1 MGP_WSBEiJ_G0034807.1 mouse_genomes_project X 43527168 43562322 - MGP_WSBEiJ_P0094618 Gm595 protein_coding protein_coding MGP_WSBEiJ_T0094864.1 MGP_WSBEiJ_G0034897.1 mouse_genomes_project X 66849150 66872441 + MGP_WSBEiJ_P0094864 Cnga2 protein_coding protein_coding MGP_WSBEiJ_T0094865.1 MGP_WSBEiJ_G0034897.1 mouse_genomes_project X 66849156 66863750 + Cnga2 protein_coding processed_transcript MGP_WSBEiJ_T0015930.1 MGP_WSBEiJ_G0014060.1 mouse_genomes_project X 79561515 79561827 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011557.1 MGP_WSBEiJ_G0009714.1 mouse_genomes_project X 61338988 61339253 + Gm23028 misc_RNA misc_RNA MGP_WSBEiJ_T0098670.1 MGP_WSBEiJ_G0037333.1 mouse_genomes_project X 52874837 52874944 + Gm25023 snRNA snRNA MGP_WSBEiJ_T0018008.1 MGP_WSBEiJ_G0015193.1 mouse_genomes_project X 34748624 35158973 + processed_transcript processed_transcript MGP_WSBEiJ_T0016086.1 MGP_WSBEiJ_G0014216.1 mouse_genomes_project X 105495166 105497572 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096018.1 MGP_WSBEiJ_G0035210.1 mouse_genomes_project X 132074502 132101729 - MGP_WSBEiJ_P0096018 protein_coding protein_coding MGP_WSBEiJ_T0096021.1 MGP_WSBEiJ_G0035210.1 mouse_genomes_project X 132074959 132099626 - MGP_WSBEiJ_P0096021 protein_coding protein_coding MGP_WSBEiJ_T0015921.1 MGP_WSBEiJ_G0014051.1 mouse_genomes_project X 75397205 75397430 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010967.1 MGP_WSBEiJ_G0009124.1 mouse_genomes_project X 61647656 61647718 - Mir743 miRNA miRNA MGP_WSBEiJ_T0010977.1 MGP_WSBEiJ_G0009134.1 mouse_genomes_project X 61671929 61672007 - Mir881 miRNA miRNA MGP_WSBEiJ_T0096121.1 MGP_WSBEiJ_G0035242.1 mouse_genomes_project X 136146927 136155211 - MGP_WSBEiJ_P0096121 Psmd10 protein_coding protein_coding MGP_WSBEiJ_T0016335.1 MGP_WSBEiJ_G0014465.1 mouse_genomes_project X 160004059 160006029 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095394.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89987686 90138870 - MGP_WSBEiJ_P0095394 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095395.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89987689 90108364 - MGP_WSBEiJ_P0095395 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095396.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89987695 90108466 - MGP_WSBEiJ_P0095396 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095397.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89988928 90138873 - MGP_WSBEiJ_P0095397 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095398.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89989017 90139203 - MGP_WSBEiJ_P0095398 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095399.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89990275 90139191 - MGP_WSBEiJ_P0095399 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095400.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89990306 90139226 - MGP_WSBEiJ_P0095400 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095401.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89990355 90022749 - MGP_WSBEiJ_P0095401 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095402.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89990670 89993681 - MGP_WSBEiJ_P0095402 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095403.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89990671 89998722 - MGP_WSBEiJ_P0095403 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095404.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 89990724 90107577 - MGP_WSBEiJ_P0095404 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095405.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 90018055 90107805 - MGP_WSBEiJ_P0095405 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095406.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 90022669 90138820 - MGP_WSBEiJ_P0095406 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095407.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 90042695 90108519 - MGP_WSBEiJ_P0095407 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0095408.1 MGP_WSBEiJ_G0035020.1 mouse_genomes_project X 90053713 90108418 - MGP_WSBEiJ_P0095408 Arhgef9 protein_coding protein_coding MGP_WSBEiJ_T0094106.1 MGP_WSBEiJ_G0034636.1 mouse_genomes_project X 2518295 2527102 + MGP_WSBEiJ_P0094106 Timm17b protein_coding protein_coding MGP_WSBEiJ_T0094107.1 MGP_WSBEiJ_G0034636.1 mouse_genomes_project X 2518609 2525081 + MGP_WSBEiJ_P0094107 Timm17b protein_coding protein_coding MGP_WSBEiJ_T0094108.1 MGP_WSBEiJ_G0034636.1 mouse_genomes_project X 2524864 2525721 + Timm17b protein_coding retained_intron MGP_WSBEiJ_T0095250.1 MGP_WSBEiJ_G0034967.1 mouse_genomes_project X 70703514 70796619 - MGP_WSBEiJ_P0095250 Pls3 protein_coding protein_coding MGP_WSBEiJ_T0095251.1 MGP_WSBEiJ_G0034967.1 mouse_genomes_project X 70703523 70796015 - MGP_WSBEiJ_P0095251 Pls3 protein_coding protein_coding MGP_WSBEiJ_T0095252.1 MGP_WSBEiJ_G0034967.1 mouse_genomes_project X 70703523 70745025 - MGP_WSBEiJ_P0095252 Pls3 protein_coding protein_coding MGP_WSBEiJ_T0095253.1 MGP_WSBEiJ_G0034967.1 mouse_genomes_project X 70703528 70761524 - MGP_WSBEiJ_P0095253 Pls3 protein_coding protein_coding MGP_WSBEiJ_T0095254.1 MGP_WSBEiJ_G0034967.1 mouse_genomes_project X 70704631 70761646 - MGP_WSBEiJ_P0095254 Pls3 protein_coding protein_coding MGP_WSBEiJ_T0095255.1 MGP_WSBEiJ_G0034967.1 mouse_genomes_project X 70794820 70796536 - Pls3 protein_coding processed_transcript MGP_WSBEiJ_T0016201.1 MGP_WSBEiJ_G0014331.1 mouse_genomes_project X 132340881 132343686 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015688.1 MGP_WSBEiJ_G0013818.1 mouse_genomes_project X 8121170 8123266 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016019.1 MGP_WSBEiJ_G0014149.1 mouse_genomes_project X 95042201 95042523 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093978.1 MGP_WSBEiJ_G0034611.1 mouse_genomes_project X 1402982 1529284 + MGP_WSBEiJ_P0093978 Dgkk protein_coding protein_coding MGP_WSBEiJ_T0096501.1 MGP_WSBEiJ_G0035330.1 mouse_genomes_project X 157193938 157257681 + MGP_WSBEiJ_P0096501 Rai2 protein_coding protein_coding MGP_WSBEiJ_T0096502.1 MGP_WSBEiJ_G0035330.1 mouse_genomes_project X 157194496 157257683 + MGP_WSBEiJ_P0096502 Rai2 protein_coding protein_coding MGP_WSBEiJ_T0094812.1 MGP_WSBEiJ_G0034884.1 mouse_genomes_project X 65153830 65157368 + MGP_WSBEiJ_P0094812 1110012L19Rik protein_coding protein_coding MGP_WSBEiJ_T0095270.1 MGP_WSBEiJ_G0034978.1 mouse_genomes_project X 72960149 72966728 - MGP_WSBEiJ_P0095270 Obp1a protein_coding protein_coding MGP_WSBEiJ_T0016225.1 MGP_WSBEiJ_G0014355.1 mouse_genomes_project X 137085770 137086037 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017992.1 MGP_WSBEiJ_G0015184.1 mouse_genomes_project X 1969684 1971804 + Gm14379 processed_transcript processed_transcript MGP_WSBEiJ_T0015975.1 MGP_WSBEiJ_G0014105.1 mouse_genomes_project X 87310409 87310585 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015685.1 MGP_WSBEiJ_G0013815.1 mouse_genomes_project X 7763017 7764277 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094916.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68537004 68547976 + MGP_WSBEiJ_P0094916 Slc6a8 protein_coding protein_coding MGP_WSBEiJ_T0094917.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68539141 68547979 + MGP_WSBEiJ_P0094917 Slc6a8 protein_coding protein_coding MGP_WSBEiJ_T0094918.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68539178 68546763 + MGP_WSBEiJ_P0094918 Slc6a8 protein_coding protein_coding MGP_WSBEiJ_T0094919.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68539390 68542797 + Slc6a8 protein_coding retained_intron MGP_WSBEiJ_T0094920.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68540978 68542816 + MGP_WSBEiJ_P0094920 Slc6a8 protein_coding protein_coding MGP_WSBEiJ_T0094921.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68542317 68547976 + MGP_WSBEiJ_P0094921 Slc6a8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094922.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68542530 68545240 + Slc6a8 protein_coding retained_intron MGP_WSBEiJ_T0094923.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68543625 68546572 + Slc6a8 protein_coding retained_intron MGP_WSBEiJ_T0094924.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68544349 68545471 + Slc6a8 protein_coding processed_transcript MGP_WSBEiJ_T0094925.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68544364 68545387 + Slc6a8 protein_coding retained_intron MGP_WSBEiJ_T0094926.1 MGP_WSBEiJ_G0034918.1 mouse_genomes_project X 68544364 68545474 + Slc6a8 protein_coding retained_intron MGP_WSBEiJ_T0015886.1 MGP_WSBEiJ_G0014016.1 mouse_genomes_project X 68885613 68886414 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101146.1 MGP_WSBEiJ_G0039603.1 mouse_genomes_project X 72606341 72610417 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094651.1 MGP_WSBEiJ_G0034820.1 mouse_genomes_project X 46005686 46301661 - MGP_WSBEiJ_P0094651 Hs6st2 protein_coding protein_coding MGP_WSBEiJ_T0094652.1 MGP_WSBEiJ_G0034820.1 mouse_genomes_project X 46005686 46301814 - MGP_WSBEiJ_P0094652 Hs6st2 protein_coding protein_coding MGP_WSBEiJ_T0094653.1 MGP_WSBEiJ_G0034820.1 mouse_genomes_project X 46296740 46301306 - Hs6st2 protein_coding retained_intron MGP_WSBEiJ_T0094654.1 MGP_WSBEiJ_G0034820.1 mouse_genomes_project X 46299949 46300523 - Hs6st2 protein_coding processed_transcript MGP_WSBEiJ_T0094655.1 MGP_WSBEiJ_G0034820.1 mouse_genomes_project X 46300135 46301044 - Hs6st2 protein_coding processed_transcript MGP_WSBEiJ_T0094278.1 MGP_WSBEiJ_G0034694.1 mouse_genomes_project X 11460786 11570371 - MGP_WSBEiJ_P0094278 Maob protein_coding protein_coding MGP_WSBEiJ_T0094279.1 MGP_WSBEiJ_G0034694.1 mouse_genomes_project X 11461543 11570280 - MGP_WSBEiJ_P0094279 Maob protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094280.1 MGP_WSBEiJ_G0034694.1 mouse_genomes_project X 11470508 11570280 - MGP_WSBEiJ_P0094280 Maob protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094281.1 MGP_WSBEiJ_G0034694.1 mouse_genomes_project X 11492362 11570325 - MGP_WSBEiJ_P0094281 Maob protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0015719.1 MGP_WSBEiJ_G0013849.1 mouse_genomes_project X 16324131 16324512 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094810.1 MGP_WSBEiJ_G0034883.1 mouse_genomes_project X 65114263 65139502 - MGP_WSBEiJ_P0094810 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094811.1 MGP_WSBEiJ_G0034883.1 mouse_genomes_project X 65123026 65133414 - MGP_WSBEiJ_P0094811 protein_coding protein_coding MGP_WSBEiJ_T0094630.1 MGP_WSBEiJ_G0034811.1 mouse_genomes_project X 44374943 44375903 - MGP_WSBEiJ_P0094630 Olfr1321 protein_coding protein_coding MGP_WSBEiJ_T0015659.1 MGP_WSBEiJ_G0013789.1 mouse_genomes_project X 2500324 2501594 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094132.1 MGP_WSBEiJ_G0034645.1 mouse_genomes_project X 2710596 2721335 - MGP_WSBEiJ_P0094132 Was protein_coding protein_coding MGP_WSBEiJ_T0094133.1 MGP_WSBEiJ_G0034645.1 mouse_genomes_project X 2717108 2719602 - Was protein_coding retained_intron MGP_WSBEiJ_T0005529.1 MGP_WSBEiJ_G0004656.1 mouse_genomes_project X 146633383 146686996 - A230072E10Rik antisense antisense MGP_WSBEiJ_T0005530.1 MGP_WSBEiJ_G0004656.1 mouse_genomes_project X 146634633 146640711 - A230072E10Rik antisense antisense MGP_WSBEiJ_T0005531.1 MGP_WSBEiJ_G0004656.1 mouse_genomes_project X 146634633 146653096 - A230072E10Rik antisense antisense MGP_WSBEiJ_T0005532.1 MGP_WSBEiJ_G0004656.1 mouse_genomes_project X 146655022 146684030 - A230072E10Rik antisense antisense MGP_WSBEiJ_T0096016.1 MGP_WSBEiJ_G0035208.1 mouse_genomes_project X 131962818 131974399 - MGP_WSBEiJ_P0096016 Rab9b protein_coding protein_coding MGP_WSBEiJ_T0094183.1 MGP_WSBEiJ_G0034660.1 mouse_genomes_project X 3312127 3542442 + MGP_WSBEiJ_P0094183 protein_coding protein_coding MGP_WSBEiJ_T0016334.1 MGP_WSBEiJ_G0014464.1 mouse_genomes_project X 159507203 159507379 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096000.1 MGP_WSBEiJ_G0035202.1 mouse_genomes_project X 131537612 131558419 - MGP_WSBEiJ_P0096000 Kir3dl2 protein_coding protein_coding MGP_WSBEiJ_T0009250.1 MGP_WSBEiJ_G0007437.1 mouse_genomes_project X 98516009 98524183 - Xist lincRNA lincRNA MGP_WSBEiJ_T0009251.1 MGP_WSBEiJ_G0007437.1 mouse_genomes_project X 98518024 98541875 - Xist lincRNA lincRNA MGP_WSBEiJ_T0009252.1 MGP_WSBEiJ_G0007437.1 mouse_genomes_project X 98526331 98527283 - Xist lincRNA lincRNA MGP_WSBEiJ_T0095006.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68797982 68807966 - MGP_WSBEiJ_P0095006 Renbp protein_coding protein_coding MGP_WSBEiJ_T0095007.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68797982 68807908 - MGP_WSBEiJ_P0095007 Renbp protein_coding protein_coding MGP_WSBEiJ_T0095008.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68797983 68802223 - Renbp protein_coding retained_intron MGP_WSBEiJ_T0095009.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68797984 68807933 - Renbp protein_coding retained_intron MGP_WSBEiJ_T0095010.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68798000 68807872 - MGP_WSBEiJ_P0095010 Renbp protein_coding protein_coding MGP_WSBEiJ_T0095011.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68801084 68806245 - Renbp protein_coding processed_transcript MGP_WSBEiJ_T0095012.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68802088 68805149 - Renbp protein_coding retained_intron MGP_WSBEiJ_T0095013.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68805307 68807857 - Renbp protein_coding retained_intron MGP_WSBEiJ_T0095014.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68806257 68807861 - MGP_WSBEiJ_P0095014 Renbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095015.1 MGP_WSBEiJ_G0034930.1 mouse_genomes_project X 68806704 68807868 - Renbp protein_coding retained_intron MGP_WSBEiJ_T0018068.1 MGP_WSBEiJ_G0015209.1 mouse_genomes_project X 131152671 131165130 + 5730412P04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0010955.1 MGP_WSBEiJ_G0009112.1 mouse_genomes_project X 47728912 47728994 - Mir450b miRNA miRNA MGP_WSBEiJ_T0099900.1 MGP_WSBEiJ_G0038563.1 mouse_genomes_project X 2144030 2144163 - Gm23082 snoRNA snoRNA MGP_WSBEiJ_T0015672.1 MGP_WSBEiJ_G0013802.1 mouse_genomes_project X 4084034 4084403 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094412.1 MGP_WSBEiJ_G0034737.1 mouse_genomes_project X 31428636 31464653 + MGP_WSBEiJ_P0094412 Slc25a43 protein_coding protein_coding MGP_WSBEiJ_T0094413.1 MGP_WSBEiJ_G0034737.1 mouse_genomes_project X 31428688 31463749 + Slc25a43 protein_coding processed_transcript MGP_WSBEiJ_T0016217.1 MGP_WSBEiJ_G0014347.1 mouse_genomes_project X 136512500 136512859 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098669.1 MGP_WSBEiJ_G0037332.1 mouse_genomes_project X 51616986 51617092 + Gm23258 snRNA snRNA MGP_WSBEiJ_T0098676.1 MGP_WSBEiJ_G0037339.1 mouse_genomes_project X 67466596 67466703 + Gm23461 snRNA snRNA MGP_WSBEiJ_T0096487.1 MGP_WSBEiJ_G0035326.1 mouse_genomes_project X 156218558 156253211 + MGP_WSBEiJ_P0096487 Rs1 protein_coding protein_coding MGP_WSBEiJ_T0096488.1 MGP_WSBEiJ_G0035326.1 mouse_genomes_project X 156218725 156248405 + MGP_WSBEiJ_P0096488 Rs1 protein_coding protein_coding MGP_WSBEiJ_T0096492.1 MGP_WSBEiJ_G0035326.1 mouse_genomes_project X 156245048 156248898 + Rs1 protein_coding processed_transcript MGP_WSBEiJ_T0099931.1 MGP_WSBEiJ_G0038594.1 mouse_genomes_project X 114539505 114539621 - Gm26182 snoRNA snoRNA MGP_WSBEiJ_T0015825.1 MGP_WSBEiJ_G0013955.1 mouse_genomes_project X 55502840 55503282 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015756.1 MGP_WSBEiJ_G0013886.1 mouse_genomes_project X 36577981 36578554 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095717.1 MGP_WSBEiJ_G0035104.1 mouse_genomes_project X 101268883 101269302 + Tlr13 protein_coding retained_intron MGP_WSBEiJ_T0095718.1 MGP_WSBEiJ_G0035104.1 mouse_genomes_project X 101268908 101286366 + MGP_WSBEiJ_P0095718 Tlr13 protein_coding protein_coding MGP_WSBEiJ_T0011582.1 MGP_WSBEiJ_G0009739.1 mouse_genomes_project X 148280683 148280982 - Gm26035 misc_RNA misc_RNA MGP_WSBEiJ_T0011011.1 MGP_WSBEiJ_G0009168.1 mouse_genomes_project X 100505725 100505823 - Mir325 miRNA miRNA MGP_WSBEiJ_T0098649.1 MGP_WSBEiJ_G0037312.1 mouse_genomes_project X 8807033 8807124 - Gm25552 snRNA snRNA MGP_WSBEiJ_T0010961.1 MGP_WSBEiJ_G0009118.1 mouse_genomes_project X 47736345 47736440 - Mir322 miRNA miRNA MGP_WSBEiJ_T0101155.1 MGP_WSBEiJ_G0039612.1 mouse_genomes_project X 86987464 86988508 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015894.1 MGP_WSBEiJ_G0014024.1 mouse_genomes_project X 69932388 69933404 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015957.1 MGP_WSBEiJ_G0014087.1 mouse_genomes_project X 84214043 84214551 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011018.1 MGP_WSBEiJ_G0009175.1 mouse_genomes_project X 130816490 130816594 - Mir1970 miRNA miRNA MGP_WSBEiJ_T0099918.1 MGP_WSBEiJ_G0038581.1 mouse_genomes_project X 70807640 70807767 + Gm23320 snoRNA snoRNA MGP_WSBEiJ_T0096323.1 MGP_WSBEiJ_G0035282.1 mouse_genomes_project X 147338213 147349869 - MGP_WSBEiJ_P0096323 Ribc1 protein_coding protein_coding MGP_WSBEiJ_T0096324.1 MGP_WSBEiJ_G0035282.1 mouse_genomes_project X 147343169 147349844 - Ribc1 protein_coding processed_transcript MGP_WSBEiJ_T0018064.1 MGP_WSBEiJ_G0015207.1 mouse_genomes_project X 129684769 129686667 - B230119M05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0094894.1 MGP_WSBEiJ_G0034912.1 mouse_genomes_project X 68288063 68289703 - MGP_WSBEiJ_P0094894 Trex2 protein_coding protein_coding MGP_WSBEiJ_T0094181.1 MGP_WSBEiJ_G0034658.1 mouse_genomes_project X 3211990 3258260 - MGP_WSBEiJ_P0094181 protein_coding protein_coding MGP_WSBEiJ_T0094911.1 MGP_WSBEiJ_G0034917.1 mouse_genomes_project X 68517300 68521031 - MGP_WSBEiJ_P0094911 Pnck protein_coding protein_coding MGP_WSBEiJ_T0094912.1 MGP_WSBEiJ_G0034917.1 mouse_genomes_project X 68517300 68521135 - MGP_WSBEiJ_P0094912 Pnck protein_coding protein_coding MGP_WSBEiJ_T0094913.1 MGP_WSBEiJ_G0034917.1 mouse_genomes_project X 68517301 68521424 - MGP_WSBEiJ_P0094913 Pnck protein_coding protein_coding MGP_WSBEiJ_T0094914.1 MGP_WSBEiJ_G0034917.1 mouse_genomes_project X 68517557 68519138 - Pnck protein_coding retained_intron MGP_WSBEiJ_T0094915.1 MGP_WSBEiJ_G0034917.1 mouse_genomes_project X 68518582 68520740 - MGP_WSBEiJ_P0094915 Pnck protein_coding protein_coding MGP_WSBEiJ_T0094928.1 MGP_WSBEiJ_G0034920.1 mouse_genomes_project X 68581979 68605589 + MGP_WSBEiJ_P0094928 Abcd1 protein_coding protein_coding MGP_WSBEiJ_T0094929.1 MGP_WSBEiJ_G0034920.1 mouse_genomes_project X 68582122 68598510 + MGP_WSBEiJ_P0094929 Abcd1 protein_coding protein_coding MGP_WSBEiJ_T0005537.1 MGP_WSBEiJ_G0004660.1 mouse_genomes_project X 155963860 155968895 - Gm15243 antisense antisense MGP_WSBEiJ_T0094191.1 MGP_WSBEiJ_G0034666.1 mouse_genomes_project X 3742682 3743080 + MGP_WSBEiJ_P0094191 protein_coding protein_coding MGP_WSBEiJ_T0094462.1 MGP_WSBEiJ_G0034766.1 mouse_genomes_project X 32670821 32712158 - Btg1-ps1 protein_coding unprocessed_pseudogene MGP_WSBEiJ_T0094464.1 MGP_WSBEiJ_G0034766.1 mouse_genomes_project X 32671556 32712158 - MGP_WSBEiJ_P0094464 Btg1-ps1 protein_coding protein_coding MGP_WSBEiJ_T0016344.1 MGP_WSBEiJ_G0014474.1 mouse_genomes_project X 161933974 161934189 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093984.1 MGP_WSBEiJ_G0034614.1 mouse_genomes_project X 1740951 1775487 - MGP_WSBEiJ_P0093984 Clcn5 protein_coding protein_coding MGP_WSBEiJ_T0093985.1 MGP_WSBEiJ_G0034614.1 mouse_genomes_project X 1746610 1911145 - MGP_WSBEiJ_P0093985 Clcn5 protein_coding protein_coding MGP_WSBEiJ_T0093986.1 MGP_WSBEiJ_G0034614.1 mouse_genomes_project X 1747318 1775446 - Clcn5 protein_coding retained_intron MGP_WSBEiJ_T0093987.1 MGP_WSBEiJ_G0034614.1 mouse_genomes_project X 1758342 1911270 - MGP_WSBEiJ_P0093987 Clcn5 protein_coding protein_coding MGP_WSBEiJ_T0093988.1 MGP_WSBEiJ_G0034614.1 mouse_genomes_project X 1800162 1911082 - Clcn5 protein_coding processed_transcript MGP_WSBEiJ_T0011554.1 MGP_WSBEiJ_G0009711.1 mouse_genomes_project X 31775918 31776189 - Gm24809 misc_RNA misc_RNA MGP_WSBEiJ_T0011558.1 MGP_WSBEiJ_G0009715.1 mouse_genomes_project X 63469536 63469592 + Gm27979 misc_RNA misc_RNA MGP_WSBEiJ_T0015874.1 MGP_WSBEiJ_G0014004.1 mouse_genomes_project X 65352713 65353661 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015824.1 MGP_WSBEiJ_G0013954.1 mouse_genomes_project X 55466387 55468319 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016071.1 MGP_WSBEiJ_G0014201.1 mouse_genomes_project X 101814808 101816170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099955.1 MGP_WSBEiJ_G0038618.1 mouse_genomes_project X 162834826 162834944 - Gm26368 snoRNA snoRNA MGP_WSBEiJ_T0016042.1 MGP_WSBEiJ_G0014172.1 mouse_genomes_project X 98334578 98336382 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016283.1 MGP_WSBEiJ_G0014413.1 mouse_genomes_project X 149171145 149171425 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094861.1 MGP_WSBEiJ_G0034896.1 mouse_genomes_project X 66830351 66846346 + MGP_WSBEiJ_P0094861 Fate1 protein_coding protein_coding MGP_WSBEiJ_T0094862.1 MGP_WSBEiJ_G0034896.1 mouse_genomes_project X 66838841 66846346 + MGP_WSBEiJ_P0094862 Fate1 protein_coding protein_coding MGP_WSBEiJ_T0094863.1 MGP_WSBEiJ_G0034896.1 mouse_genomes_project X 66840503 66846068 + Fate1 protein_coding processed_transcript MGP_WSBEiJ_T0018033.1 MGP_WSBEiJ_G0015199.1 mouse_genomes_project X 67940408 67948228 + processed_transcript processed_transcript MGP_WSBEiJ_T0096626.1 MGP_WSBEiJ_G0035364.1 mouse_genomes_project X 162713682 162732403 - MGP_WSBEiJ_P0096626 Tlr8 protein_coding protein_coding MGP_WSBEiJ_T0096627.1 MGP_WSBEiJ_G0035364.1 mouse_genomes_project X 162713718 162731905 - MGP_WSBEiJ_P0096627 Tlr8 protein_coding protein_coding MGP_WSBEiJ_T0096628.1 MGP_WSBEiJ_G0035364.1 mouse_genomes_project X 162715805 162732416 - Tlr8 protein_coding processed_transcript MGP_WSBEiJ_T0096629.1 MGP_WSBEiJ_G0035364.1 mouse_genomes_project X 162716529 162732446 - MGP_WSBEiJ_P0096629 Tlr8 protein_coding protein_coding MGP_WSBEiJ_T0096630.1 MGP_WSBEiJ_G0035364.1 mouse_genomes_project X 162727471 162732401 - Tlr8 protein_coding processed_transcript MGP_WSBEiJ_T0016291.1 MGP_WSBEiJ_G0014421.1 mouse_genomes_project X 150936369 150936939 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098679.1 MGP_WSBEiJ_G0037342.1 mouse_genomes_project X 72454420 72454593 + Gm23121 snRNA snRNA MGP_WSBEiJ_T0016174.1 MGP_WSBEiJ_G0014304.1 mouse_genomes_project X 128369142 128369878 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015914.1 MGP_WSBEiJ_G0014044.1 mouse_genomes_project X 73548707 73549691 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015881.1 MGP_WSBEiJ_G0014011.1 mouse_genomes_project X 65808480 65809111 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002438.1 MGP_WSBEiJ_G0002354.1 mouse_genomes_project X 129746095 129747513 - TEC TEC MGP_WSBEiJ_T0095492.1 MGP_WSBEiJ_G0035045.1 mouse_genomes_project X 95411182 95434248 + Dgat2l6 protein_coding retained_intron MGP_WSBEiJ_T0095493.1 MGP_WSBEiJ_G0035045.1 mouse_genomes_project X 95411185 95434501 + MGP_WSBEiJ_P0095493 Dgat2l6 protein_coding protein_coding MGP_WSBEiJ_T0096144.1 MGP_WSBEiJ_G0035253.1 mouse_genomes_project X 137890378 138043867 + MGP_WSBEiJ_P0096144 Tmem164 protein_coding protein_coding MGP_WSBEiJ_T0096145.1 MGP_WSBEiJ_G0035253.1 mouse_genomes_project X 137891879 137980089 + Tmem164 protein_coding retained_intron MGP_WSBEiJ_T0096146.1 MGP_WSBEiJ_G0035253.1 mouse_genomes_project X 137979791 138052991 + MGP_WSBEiJ_P0096146 Tmem164 protein_coding protein_coding MGP_WSBEiJ_T0010973.1 MGP_WSBEiJ_G0009130.1 mouse_genomes_project X 61665907 61665978 - Mir741 miRNA miRNA MGP_WSBEiJ_T0094820.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66045628 66155557 + MGP_WSBEiJ_P0094820 Mtm1 protein_coding protein_coding MGP_WSBEiJ_T0094821.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049832 66155557 + MGP_WSBEiJ_P0094821 Mtm1 protein_coding protein_coding MGP_WSBEiJ_T0094822.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049832 66155557 + MGP_WSBEiJ_P0094822 Mtm1 protein_coding protein_coding MGP_WSBEiJ_T0094823.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049832 66095434 + MGP_WSBEiJ_P0094823 Mtm1 protein_coding protein_coding MGP_WSBEiJ_T0094824.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049854 66155550 + MGP_WSBEiJ_P0094824 Mtm1 protein_coding protein_coding MGP_WSBEiJ_T0094825.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049857 66138318 + Mtm1 protein_coding retained_intron MGP_WSBEiJ_T0094826.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049862 66137039 + Mtm1 protein_coding retained_intron MGP_WSBEiJ_T0094827.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049865 66155527 + MGP_WSBEiJ_P0094827 Mtm1 protein_coding protein_coding MGP_WSBEiJ_T0094828.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049885 66150575 + Mtm1 protein_coding retained_intron MGP_WSBEiJ_T0094829.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049908 66155527 + MGP_WSBEiJ_P0094829 Mtm1 protein_coding protein_coding MGP_WSBEiJ_T0094830.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049911 66071851 + Mtm1 protein_coding retained_intron MGP_WSBEiJ_T0094831.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66049911 66090565 + Mtm1 protein_coding retained_intron MGP_WSBEiJ_T0094832.1 MGP_WSBEiJ_G0034888.1 mouse_genomes_project X 66140839 66155953 + Mtm1 protein_coding retained_intron MGP_WSBEiJ_T0016218.1 MGP_WSBEiJ_G0014348.1 mouse_genomes_project X 136569606 136570388 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095508.1 MGP_WSBEiJ_G0035050.1 mouse_genomes_project X 95518826 95621441 + MGP_WSBEiJ_P0095508 Kif4 protein_coding protein_coding MGP_WSBEiJ_T0095509.1 MGP_WSBEiJ_G0035050.1 mouse_genomes_project X 95527840 95530186 + Kif4 protein_coding retained_intron MGP_WSBEiJ_T0095510.1 MGP_WSBEiJ_G0035050.1 mouse_genomes_project X 95604132 95618877 + Kif4 protein_coding processed_transcript MGP_WSBEiJ_T0015974.1 MGP_WSBEiJ_G0014104.1 mouse_genomes_project X 86882506 86883169 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015765.1 MGP_WSBEiJ_G0013895.1 mouse_genomes_project X 38974586 38974946 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018039.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100149623 100182821 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018040.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100151234 100182771 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018041.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100151243 100182767 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018042.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100153278 100182849 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018043.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100153825 100182849 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018044.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100155083 100182812 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018045.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100155695 100182768 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018046.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100156227 100182780 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018047.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100156425 100182760 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018048.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100156500 100182833 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018049.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100175570 100182829 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018050.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100180589 100182819 - 5530601H04Rik processed_transcript retained_intron MGP_WSBEiJ_T0018051.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100181836 100192076 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018052.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100187699 100188465 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018053.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100187919 100192272 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018054.1 MGP_WSBEiJ_G0015204.1 mouse_genomes_project X 100189932 100192100 - 5530601H04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0100168.1 MGP_WSBEiJ_G0038742.1 mouse_genomes_project X 2736583 2737403 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0095657.1 MGP_WSBEiJ_G0035087.1 mouse_genomes_project X 98471726 98482200 + MGP_WSBEiJ_P0095657 Tsx protein_coding protein_coding MGP_WSBEiJ_T0015968.1 MGP_WSBEiJ_G0014098.1 mouse_genomes_project X 86359920 86360308 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100186.1 MGP_WSBEiJ_G0038754.1 mouse_genomes_project X 132123942 132124238 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0005540.1 MGP_WSBEiJ_G0004663.1 mouse_genomes_project X 164527454 164599728 - Gm15261 antisense antisense MGP_WSBEiJ_T0016124.1 MGP_WSBEiJ_G0014254.1 mouse_genomes_project X 112537709 112539403 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094434.1 MGP_WSBEiJ_G0034744.1 mouse_genomes_project X 31788859 31791742 - MGP_WSBEiJ_P0094434 Rpl39 protein_coding protein_coding MGP_WSBEiJ_T0094435.1 MGP_WSBEiJ_G0034744.1 mouse_genomes_project X 31789982 31791506 - Rpl39 protein_coding retained_intron MGP_WSBEiJ_T0094436.1 MGP_WSBEiJ_G0034744.1 mouse_genomes_project X 31790876 31791496 - Rpl39 protein_coding retained_intron MGP_WSBEiJ_T0010972.1 MGP_WSBEiJ_G0009129.1 mouse_genomes_project X 61661709 61661776 - Mir471 miRNA miRNA MGP_WSBEiJ_T0097142.1 MGP_WSBEiJ_G0035823.1 mouse_genomes_project X 63750436 63750557 - n-R5s7 rRNA rRNA MGP_WSBEiJ_T0094690.1 MGP_WSBEiJ_G0034841.1 mouse_genomes_project X 50656259 50685910 + MGP_WSBEiJ_P0094690 Gm773 protein_coding protein_coding MGP_WSBEiJ_T0015803.1 MGP_WSBEiJ_G0013933.1 mouse_genomes_project X 48895408 48895585 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015843.1 MGP_WSBEiJ_G0013973.1 mouse_genomes_project X 57511604 57513702 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098683.1 MGP_WSBEiJ_G0037346.1 mouse_genomes_project X 93675467 93675574 + Gm26000 snRNA snRNA MGP_WSBEiJ_T0094660.1 MGP_WSBEiJ_G0034823.1 mouse_genomes_project X 46691676 46809116 - MGP_WSBEiJ_P0094660 Gpc4 protein_coding protein_coding MGP_WSBEiJ_T0016178.1 MGP_WSBEiJ_G0014308.1 mouse_genomes_project X 129681731 129682089 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016061.1 MGP_WSBEiJ_G0014191.1 mouse_genomes_project X 100408805 100409149 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100184.1 MGP_WSBEiJ_G0038752.1 mouse_genomes_project X 125506081 125506790 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0010978.1 MGP_WSBEiJ_G0009135.1 mouse_genomes_project X 61681375 61681452 - Mir871 miRNA miRNA MGP_WSBEiJ_T0015888.1 MGP_WSBEiJ_G0014018.1 mouse_genomes_project X 69396529 69397362 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015822.1 MGP_WSBEiJ_G0013952.1 mouse_genomes_project X 54939099 54939695 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094779.1 MGP_WSBEiJ_G0034872.1 mouse_genomes_project X 59076184 59081415 + MGP_WSBEiJ_P0094779 3830417A13Rik protein_coding protein_coding MGP_WSBEiJ_T0094780.1 MGP_WSBEiJ_G0034872.1 mouse_genomes_project X 59076984 59080144 + MGP_WSBEiJ_P0094780 3830417A13Rik protein_coding protein_coding MGP_WSBEiJ_T0015653.1 MGP_WSBEiJ_G0013783.1 mouse_genomes_project X 690099 691026 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099943.1 MGP_WSBEiJ_G0038606.1 mouse_genomes_project X 142182298 142182426 + Snora35 snoRNA snoRNA MGP_WSBEiJ_T0015801.1 MGP_WSBEiJ_G0013931.1 mouse_genomes_project X 48497897 48498098 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095673.1 MGP_WSBEiJ_G0035096.1 mouse_genomes_project X 99957143 99959463 - MGP_WSBEiJ_P0095673 Magee2 protein_coding protein_coding MGP_WSBEiJ_T0005517.1 MGP_WSBEiJ_G0004647.1 mouse_genomes_project X 88930908 89005339 + Gm14798 antisense antisense MGP_WSBEiJ_T0100185.1 MGP_WSBEiJ_G0038753.1 mouse_genomes_project X 131901981 131902303 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0094180.1 MGP_WSBEiJ_G0034657.1 mouse_genomes_project X 3117748 3122620 - MGP_WSBEiJ_P0094180 protein_coding protein_coding MGP_WSBEiJ_T0016308.1 MGP_WSBEiJ_G0014438.1 mouse_genomes_project X 154242855 154243740 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016062.1 MGP_WSBEiJ_G0014192.1 mouse_genomes_project X 100451688 100452425 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096382.1 MGP_WSBEiJ_G0035302.1 mouse_genomes_project X 150358542 150444810 - MGP_WSBEiJ_P0096382 Magea5 protein_coding protein_coding MGP_WSBEiJ_T0015873.1 MGP_WSBEiJ_G0014003.1 mouse_genomes_project X 65352713 65353637 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101173.1 MGP_WSBEiJ_G0039630.1 mouse_genomes_project X 155727535 155727828 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0096475.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155936045 155964136 + MGP_WSBEiJ_P0096475 Phka2 protein_coding protein_coding MGP_WSBEiJ_T0096476.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155936307 155966175 + Phka2 protein_coding retained_intron MGP_WSBEiJ_T0096477.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155936307 156031485 + MGP_WSBEiJ_P0096477 Phka2 protein_coding protein_coding MGP_WSBEiJ_T0096478.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155936338 155993172 + MGP_WSBEiJ_P0096478 Phka2 protein_coding protein_coding MGP_WSBEiJ_T0096479.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155936685 156031486 + MGP_WSBEiJ_P0096479 Phka2 protein_coding protein_coding MGP_WSBEiJ_T0096480.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155959702 155975099 + Phka2 protein_coding processed_transcript MGP_WSBEiJ_T0096481.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155959712 155975094 + Phka2 protein_coding processed_transcript MGP_WSBEiJ_T0096482.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155967249 156026047 + Phka2 protein_coding processed_transcript MGP_WSBEiJ_T0096483.1 MGP_WSBEiJ_G0035324.1 mouse_genomes_project X 155992003 155996966 + Phka2 protein_coding processed_transcript MGP_WSBEiJ_T0016257.1 MGP_WSBEiJ_G0014387.1 mouse_genomes_project X 141276516 141277600 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098680.1 MGP_WSBEiJ_G0037343.1 mouse_genomes_project X 76868377 76868477 + Gm22686 snRNA snRNA MGP_WSBEiJ_T0096470.1 MGP_WSBEiJ_G0035323.1 mouse_genomes_project X 155820202 155892374 + Adgrg2 protein_coding retained_intron MGP_WSBEiJ_T0096471.1 MGP_WSBEiJ_G0035323.1 mouse_genomes_project X 155820202 155901699 + MGP_WSBEiJ_P0096471 Adgrg2 protein_coding protein_coding MGP_WSBEiJ_T0096472.1 MGP_WSBEiJ_G0035323.1 mouse_genomes_project X 155848785 155931954 + MGP_WSBEiJ_P0096472 Adgrg2 protein_coding protein_coding MGP_WSBEiJ_T0096473.1 MGP_WSBEiJ_G0035323.1 mouse_genomes_project X 155857269 155930617 + MGP_WSBEiJ_P0096473 Adgrg2 protein_coding protein_coding MGP_WSBEiJ_T0096474.1 MGP_WSBEiJ_G0035323.1 mouse_genomes_project X 155860350 155931954 + MGP_WSBEiJ_P0096474 Adgrg2 protein_coding protein_coding MGP_WSBEiJ_T0095259.1 MGP_WSBEiJ_G0034971.1 mouse_genomes_project X 71395313 71399940 + MGP_WSBEiJ_P0095259 Cldn34b4 protein_coding protein_coding MGP_WSBEiJ_T0095260.1 MGP_WSBEiJ_G0034971.1 mouse_genomes_project X 71395415 71399849 + MGP_WSBEiJ_P0095260 Cldn34b4 protein_coding protein_coding MGP_WSBEiJ_T0005524.1 MGP_WSBEiJ_G0004652.1 mouse_genomes_project X 98437254 98438475 - Gm26952 antisense antisense MGP_WSBEiJ_T0017998.1 MGP_WSBEiJ_G0015187.1 mouse_genomes_project X 2320437 2330613 + processed_transcript processed_transcript MGP_WSBEiJ_T0016131.1 MGP_WSBEiJ_G0014261.1 mouse_genomes_project X 113170196 113170547 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095314.1 MGP_WSBEiJ_G0034991.1 mouse_genomes_project X 79953002 79971300 + MGP_WSBEiJ_P0095314 Fthl17a protein_coding protein_coding MGP_WSBEiJ_T0016256.1 MGP_WSBEiJ_G0014386.1 mouse_genomes_project X 141249931 141250298 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016248.1 MGP_WSBEiJ_G0014378.1 mouse_genomes_project X 140054008 140054609 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015661.1 MGP_WSBEiJ_G0013791.1 mouse_genomes_project X 2572910 2573623 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098717.1 MGP_WSBEiJ_G0037380.1 mouse_genomes_project X 157605427 157605531 + Gm23794 snRNA snRNA MGP_WSBEiJ_T0011028.1 MGP_WSBEiJ_G0009185.1 mouse_genomes_project X 142200039 142200125 + Mir1264 miRNA miRNA MGP_WSBEiJ_T0016341.1 MGP_WSBEiJ_G0014471.1 mouse_genomes_project X 161929981 161931379 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101144.1 MGP_WSBEiJ_G0039601.1 mouse_genomes_project X 70380428 70406387 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015785.1 MGP_WSBEiJ_G0013915.1 mouse_genomes_project X 44592595 44593276 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094288.1 MGP_WSBEiJ_G0034699.1 mouse_genomes_project X 12908556 13033779 + MGP_WSBEiJ_P0094288 Kdm6a protein_coding protein_coding MGP_WSBEiJ_T0094289.1 MGP_WSBEiJ_G0034699.1 mouse_genomes_project X 12908556 13033779 + MGP_WSBEiJ_P0094289 Kdm6a protein_coding protein_coding MGP_WSBEiJ_T0094290.1 MGP_WSBEiJ_G0034699.1 mouse_genomes_project X 12908630 13009127 + Kdm6a protein_coding retained_intron MGP_WSBEiJ_T0094291.1 MGP_WSBEiJ_G0034699.1 mouse_genomes_project X 12908988 13032296 + MGP_WSBEiJ_P0094291 Kdm6a protein_coding unknown_likely_coding MGP_WSBEiJ_T0094292.1 MGP_WSBEiJ_G0034699.1 mouse_genomes_project X 13027287 13031034 + Kdm6a protein_coding retained_intron MGP_WSBEiJ_T0094187.1 MGP_WSBEiJ_G0034663.1 mouse_genomes_project X 3371792 3376816 - MGP_WSBEiJ_P0094187 protein_coding protein_coding MGP_WSBEiJ_T0094188.1 MGP_WSBEiJ_G0034663.1 mouse_genomes_project X 3371793 3378653 - MGP_WSBEiJ_P0094188 protein_coding protein_coding MGP_WSBEiJ_T0017999.1 MGP_WSBEiJ_G0015188.1 mouse_genomes_project X 2728157 2737991 + Gm6787 processed_transcript processed_transcript MGP_WSBEiJ_T0015781.1 MGP_WSBEiJ_G0013911.1 mouse_genomes_project X 43574647 43574944 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094745.1 MGP_WSBEiJ_G0034857.1 mouse_genomes_project X 52311935 52391719 + MGP_WSBEiJ_P0094745 Gm364 protein_coding protein_coding MGP_WSBEiJ_T0095341.1 MGP_WSBEiJ_G0035005.1 mouse_genomes_project X 86775395 86776430 - MGP_WSBEiJ_P0095341 Gm8914 protein_coding protein_coding MGP_WSBEiJ_T0015864.1 MGP_WSBEiJ_G0013994.1 mouse_genomes_project X 62523171 62523734 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016031.1 MGP_WSBEiJ_G0014161.1 mouse_genomes_project X 97117899 97118363 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015660.1 MGP_WSBEiJ_G0013790.1 mouse_genomes_project X 2500393 2501592 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096124.1 MGP_WSBEiJ_G0035244.1 mouse_genomes_project X 136370891 136694602 - MGP_WSBEiJ_P0096124 Col4a6 protein_coding protein_coding MGP_WSBEiJ_T0096125.1 MGP_WSBEiJ_G0035244.1 mouse_genomes_project X 136391687 136413097 - Col4a6 protein_coding processed_transcript MGP_WSBEiJ_T0096126.1 MGP_WSBEiJ_G0035244.1 mouse_genomes_project X 136395247 136398128 - Col4a6 protein_coding retained_intron MGP_WSBEiJ_T0095294.1 MGP_WSBEiJ_G0034986.1 mouse_genomes_project X 74405159 74457396 - MGP_WSBEiJ_P0095294 Mageb16 protein_coding protein_coding MGP_WSBEiJ_T0095295.1 MGP_WSBEiJ_G0034986.1 mouse_genomes_project X 74405159 74420092 - MGP_WSBEiJ_P0095295 Mageb16 protein_coding protein_coding MGP_WSBEiJ_T0095655.1 MGP_WSBEiJ_G0035085.1 mouse_genomes_project X 98375850 98385043 + MGP_WSBEiJ_P0095655 Cdx4 protein_coding protein_coding MGP_WSBEiJ_T0094817.1 MGP_WSBEiJ_G0034886.1 mouse_genomes_project X 65384219 65385059 + MGP_WSBEiJ_P0094817 4930567H17Rik protein_coding protein_coding MGP_WSBEiJ_T0094220.1 MGP_WSBEiJ_G0034678.1 mouse_genomes_project X 5000981 5072735 + MGP_WSBEiJ_P0094220 Otc protein_coding protein_coding MGP_WSBEiJ_T0094221.1 MGP_WSBEiJ_G0034678.1 mouse_genomes_project X 5001043 5068750 + MGP_WSBEiJ_P0094221 Otc protein_coding protein_coding MGP_WSBEiJ_T0015948.1 MGP_WSBEiJ_G0014078.1 mouse_genomes_project X 83469018 83469276 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095449.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93405785 93753547 - MGP_WSBEiJ_P0095449 Ophn1 protein_coding protein_coding MGP_WSBEiJ_T0095450.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93409798 93753343 - MGP_WSBEiJ_P0095450 Ophn1 protein_coding protein_coding MGP_WSBEiJ_T0095451.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93409804 93430523 - MGP_WSBEiJ_P0095451 Ophn1 protein_coding protein_coding MGP_WSBEiJ_T0095452.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93415115 93430469 - Ophn1 protein_coding processed_transcript MGP_WSBEiJ_T0095453.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93572119 93753587 - Ophn1 protein_coding retained_intron MGP_WSBEiJ_T0095454.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93572347 93753547 - Ophn1 protein_coding retained_intron MGP_WSBEiJ_T0095455.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93593883 93753547 - MGP_WSBEiJ_P0095455 Ophn1 protein_coding protein_coding MGP_WSBEiJ_T0095456.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93662706 93753171 - Ophn1 protein_coding retained_intron MGP_WSBEiJ_T0095457.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93736401 93752946 - Ophn1 protein_coding processed_transcript MGP_WSBEiJ_T0095458.1 MGP_WSBEiJ_G0035035.1 mouse_genomes_project X 93750342 93753187 - Ophn1 protein_coding retained_intron MGP_WSBEiJ_T0015745.1 MGP_WSBEiJ_G0013875.1 mouse_genomes_project X 34672350 34672779 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016222.1 MGP_WSBEiJ_G0014352.1 mouse_genomes_project X 136994226 136994709 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015852.1 MGP_WSBEiJ_G0013982.1 mouse_genomes_project X 59860814 59861717 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096165.1 MGP_WSBEiJ_G0035259.1 mouse_genomes_project X 139074065 139152117 - MGP_WSBEiJ_P0096165 Dcx protein_coding protein_coding MGP_WSBEiJ_T0096166.1 MGP_WSBEiJ_G0035259.1 mouse_genomes_project X 139078927 139152010 - MGP_WSBEiJ_P0096166 Dcx protein_coding protein_coding MGP_WSBEiJ_T0096167.1 MGP_WSBEiJ_G0035259.1 mouse_genomes_project X 139080010 139151930 - MGP_WSBEiJ_P0096167 Dcx protein_coding protein_coding MGP_WSBEiJ_T0096168.1 MGP_WSBEiJ_G0035259.1 mouse_genomes_project X 139081697 139152025 - MGP_WSBEiJ_P0096168 Dcx protein_coding protein_coding MGP_WSBEiJ_T0096169.1 MGP_WSBEiJ_G0035259.1 mouse_genomes_project X 139087593 139151856 - Dcx protein_coding retained_intron MGP_WSBEiJ_T0096170.1 MGP_WSBEiJ_G0035259.1 mouse_genomes_project X 139092096 139151925 - Dcx protein_coding retained_intron MGP_WSBEiJ_T0011569.1 MGP_WSBEiJ_G0009726.1 mouse_genomes_project X 98669752 98669879 + Gm27285 misc_RNA misc_RNA MGP_WSBEiJ_T0094732.1 MGP_WSBEiJ_G0034854.1 mouse_genomes_project X 52106432 52119070 + MGP_WSBEiJ_P0094732 Cd40lg protein_coding protein_coding MGP_WSBEiJ_T0099940.1 MGP_WSBEiJ_G0038603.1 mouse_genomes_project X 132287412 132287531 + Gm23679 snoRNA snoRNA MGP_WSBEiJ_T0016165.1 MGP_WSBEiJ_G0014295.1 mouse_genomes_project X 126167391 126168701 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094325.1 MGP_WSBEiJ_G0034709.1 mouse_genomes_project X 15359467 15371398 + MGP_WSBEiJ_P0094325 Cdk16 protein_coding protein_coding MGP_WSBEiJ_T0094326.1 MGP_WSBEiJ_G0034709.1 mouse_genomes_project X 15359512 15365880 + Cdk16 protein_coding processed_transcript MGP_WSBEiJ_T0094327.1 MGP_WSBEiJ_G0034709.1 mouse_genomes_project X 15359931 15371398 + MGP_WSBEiJ_P0094327 Cdk16 protein_coding protein_coding MGP_WSBEiJ_T0094328.1 MGP_WSBEiJ_G0034709.1 mouse_genomes_project X 15365800 15367803 + Cdk16 protein_coding retained_intron MGP_WSBEiJ_T0094329.1 MGP_WSBEiJ_G0034709.1 mouse_genomes_project X 15367378 15368003 + Cdk16 protein_coding retained_intron MGP_WSBEiJ_T0094330.1 MGP_WSBEiJ_G0034709.1 mouse_genomes_project X 15367535 15368726 + Cdk16 protein_coding retained_intron MGP_WSBEiJ_T0094331.1 MGP_WSBEiJ_G0034709.1 mouse_genomes_project X 15367922 15368685 + Cdk16 protein_coding retained_intron MGP_WSBEiJ_T0094332.1 MGP_WSBEiJ_G0034709.1 mouse_genomes_project X 15367962 15371317 + Cdk16 protein_coding processed_transcript MGP_WSBEiJ_T0094410.1 MGP_WSBEiJ_G0034736.1 mouse_genomes_project X 31297874 31336748 - MGP_WSBEiJ_P0094410 Akap17b protein_coding protein_coding MGP_WSBEiJ_T0094411.1 MGP_WSBEiJ_G0034736.1 mouse_genomes_project X 31301442 31336449 - MGP_WSBEiJ_P0094411 Akap17b protein_coding protein_coding MGP_WSBEiJ_T0095411.1 MGP_WSBEiJ_G0035023.1 mouse_genomes_project X 90583093 90603378 - MGP_WSBEiJ_P0095411 Zc4h2 protein_coding protein_coding MGP_WSBEiJ_T0095412.1 MGP_WSBEiJ_G0035023.1 mouse_genomes_project X 90583096 90603353 - MGP_WSBEiJ_P0095412 Zc4h2 protein_coding protein_coding MGP_WSBEiJ_T0095413.1 MGP_WSBEiJ_G0035023.1 mouse_genomes_project X 90583099 90603479 - MGP_WSBEiJ_P0095413 Zc4h2 protein_coding protein_coding MGP_WSBEiJ_T0005486.1 MGP_WSBEiJ_G0004624.1 mouse_genomes_project X 2171012 2178427 + Ppp1r3fos antisense antisense MGP_WSBEiJ_T0005487.1 MGP_WSBEiJ_G0004624.1 mouse_genomes_project X 2171904 2175828 + Ppp1r3fos antisense antisense MGP_WSBEiJ_T0094071.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2403860 2435475 + MGP_WSBEiJ_P0094071 Gripap1 protein_coding protein_coding MGP_WSBEiJ_T0094072.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2404089 2427387 + MGP_WSBEiJ_P0094072 Gripap1 protein_coding protein_coding MGP_WSBEiJ_T0094073.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2404090 2435471 + MGP_WSBEiJ_P0094073 Gripap1 protein_coding protein_coding MGP_WSBEiJ_T0094074.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2404101 2408652 + Gripap1 protein_coding retained_intron MGP_WSBEiJ_T0094075.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2404103 2435471 + MGP_WSBEiJ_P0094075 Gripap1 protein_coding protein_coding MGP_WSBEiJ_T0094076.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2404107 2427387 + MGP_WSBEiJ_P0094076 Gripap1 protein_coding protein_coding MGP_WSBEiJ_T0094077.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2404113 2434864 + Gripap1 protein_coding processed_transcript MGP_WSBEiJ_T0094078.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2413112 2425763 + Gripap1 protein_coding retained_intron MGP_WSBEiJ_T0094079.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2425134 2425683 + Gripap1 protein_coding processed_transcript MGP_WSBEiJ_T0094080.1 MGP_WSBEiJ_G0034630.1 mouse_genomes_project X 2433826 2435471 + Gripap1 protein_coding retained_intron MGP_WSBEiJ_T0101140.1 MGP_WSBEiJ_G0039597.1 mouse_genomes_project X 65384219 65385059 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015674.1 MGP_WSBEiJ_G0013804.1 mouse_genomes_project X 5773672 5774165 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010982.1 MGP_WSBEiJ_G0009139.1 mouse_genomes_project X 61693208 61693266 - Mir465d miRNA miRNA MGP_WSBEiJ_T0015657.1 MGP_WSBEiJ_G0013787.1 mouse_genomes_project X 2143702 2143997 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095643.1 MGP_WSBEiJ_G0035079.1 mouse_genomes_project X 97709233 97764386 + MGP_WSBEiJ_P0095643 1700031F05Rik protein_coding protein_coding MGP_WSBEiJ_T0095833.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115308153 115950271 + MGP_WSBEiJ_P0095833 Pcdh11x protein_coding protein_coding MGP_WSBEiJ_T0095834.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115308153 115950271 + MGP_WSBEiJ_P0095834 Pcdh11x protein_coding protein_coding MGP_WSBEiJ_T0095835.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115308221 115310410 + Pcdh11x protein_coding retained_intron MGP_WSBEiJ_T0095836.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115308221 115954546 + MGP_WSBEiJ_P0095836 Pcdh11x protein_coding protein_coding MGP_WSBEiJ_T0095837.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115308297 115950271 + MGP_WSBEiJ_P0095837 Pcdh11x protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095839.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115383622 115954534 + MGP_WSBEiJ_P0095839 Pcdh11x protein_coding protein_coding MGP_WSBEiJ_T0095840.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115417074 115427969 + MGP_WSBEiJ_P0095840 Pcdh11x protein_coding protein_coding MGP_WSBEiJ_T0095841.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115418977 115950269 + MGP_WSBEiJ_P0095841 Pcdh11x protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095842.1 MGP_WSBEiJ_G0035147.1 mouse_genomes_project X 115418977 115950271 + MGP_WSBEiJ_P0095842 Pcdh11x protein_coding protein_coding MGP_WSBEiJ_T0009210.1 MGP_WSBEiJ_G0007406.1 mouse_genomes_project X 5457555 5468685 - Gm10489 lincRNA lincRNA MGP_WSBEiJ_T0016032.1 MGP_WSBEiJ_G0014162.1 mouse_genomes_project X 97148461 97148818 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096653.1 MGP_WSBEiJ_G0035370.1 mouse_genomes_project X 164664930 164676003 - MGP_WSBEiJ_P0096653 Amelx protein_coding protein_coding MGP_WSBEiJ_T0096654.1 MGP_WSBEiJ_G0035370.1 mouse_genomes_project X 164668838 164676003 - Amelx protein_coding processed_transcript MGP_WSBEiJ_T0096655.1 MGP_WSBEiJ_G0035370.1 mouse_genomes_project X 164668838 164676003 - MGP_WSBEiJ_P0096655 Amelx protein_coding protein_coding MGP_WSBEiJ_T0096656.1 MGP_WSBEiJ_G0035370.1 mouse_genomes_project X 164668838 164676003 - MGP_WSBEiJ_P0096656 Amelx protein_coding protein_coding MGP_WSBEiJ_T0096657.1 MGP_WSBEiJ_G0035370.1 mouse_genomes_project X 164668838 164676003 - MGP_WSBEiJ_P0096657 Amelx protein_coding protein_coding MGP_WSBEiJ_T0015808.1 MGP_WSBEiJ_G0013938.1 mouse_genomes_project X 50775212 50780966 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094113.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2550673 2569511 - MGP_WSBEiJ_P0094113 Hdac6 protein_coding protein_coding MGP_WSBEiJ_T0094114.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2550675 2569511 - MGP_WSBEiJ_P0094114 Hdac6 protein_coding protein_coding MGP_WSBEiJ_T0094115.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2550677 2569460 - Hdac6 protein_coding retained_intron MGP_WSBEiJ_T0094116.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2551912 2569511 - MGP_WSBEiJ_P0094116 Hdac6 protein_coding protein_coding MGP_WSBEiJ_T0094117.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2552108 2555039 - Hdac6 protein_coding retained_intron MGP_WSBEiJ_T0094118.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2559084 2560435 - Hdac6 protein_coding retained_intron MGP_WSBEiJ_T0094119.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2559191 2561726 - Hdac6 protein_coding retained_intron MGP_WSBEiJ_T0094120.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2564992 2568780 - Hdac6 protein_coding retained_intron MGP_WSBEiJ_T0094121.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2565016 2569175 - MGP_WSBEiJ_P0094121 Hdac6 protein_coding protein_coding MGP_WSBEiJ_T0094122.1 MGP_WSBEiJ_G0034641.1 mouse_genomes_project X 2568587 2569389 - MGP_WSBEiJ_P0094122 Hdac6 protein_coding protein_coding MGP_WSBEiJ_T0094190.1 MGP_WSBEiJ_G0034665.1 mouse_genomes_project X 3742667 3743135 + MGP_WSBEiJ_P0094190 protein_coding protein_coding MGP_WSBEiJ_T0099915.1 MGP_WSBEiJ_G0038578.1 mouse_genomes_project X 69164986 69165123 + Snora70 snoRNA snoRNA MGP_WSBEiJ_T0095893.1 MGP_WSBEiJ_G0035167.1 mouse_genomes_project X 129280975 129335137 + MGP_WSBEiJ_P0095893 Cenpi protein_coding protein_coding MGP_WSBEiJ_T0095894.1 MGP_WSBEiJ_G0035167.1 mouse_genomes_project X 129281046 129335134 + MGP_WSBEiJ_P0095894 Cenpi protein_coding protein_coding MGP_WSBEiJ_T0095895.1 MGP_WSBEiJ_G0035167.1 mouse_genomes_project X 129281090 129283130 + MGP_WSBEiJ_P0095895 Cenpi protein_coding protein_coding MGP_WSBEiJ_T0095896.1 MGP_WSBEiJ_G0035167.1 mouse_genomes_project X 129284843 129317707 + Cenpi protein_coding processed_transcript MGP_WSBEiJ_T0095897.1 MGP_WSBEiJ_G0035167.1 mouse_genomes_project X 129319376 129335135 + Cenpi protein_coding processed_transcript MGP_WSBEiJ_T0016147.1 MGP_WSBEiJ_G0014277.1 mouse_genomes_project X 117200507 117200803 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010930.1 MGP_WSBEiJ_G0009087.1 mouse_genomes_project X 2421965 2422086 + Mir1198 miRNA miRNA MGP_WSBEiJ_T0018065.1 MGP_WSBEiJ_G0015208.1 mouse_genomes_project X 130040273 130053652 - processed_transcript processed_transcript MGP_WSBEiJ_T0018066.1 MGP_WSBEiJ_G0015208.1 mouse_genomes_project X 130041072 130062555 - processed_transcript processed_transcript MGP_WSBEiJ_T0018067.1 MGP_WSBEiJ_G0015208.1 mouse_genomes_project X 130045448 130054106 - processed_transcript processed_transcript MGP_WSBEiJ_T0016007.1 MGP_WSBEiJ_G0014137.1 mouse_genomes_project X 91877747 91878139 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101136.1 MGP_WSBEiJ_G0039593.1 mouse_genomes_project X 50666655 50685670 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015814.1 MGP_WSBEiJ_G0013944.1 mouse_genomes_project X 52626372 52627364 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094486.1 MGP_WSBEiJ_G0034776.1 mouse_genomes_project X 33229714 33261584 - MGP_WSBEiJ_P0094486 Cul4b protein_coding protein_coding MGP_WSBEiJ_T0094487.1 MGP_WSBEiJ_G0034776.1 mouse_genomes_project X 33229714 33273115 - MGP_WSBEiJ_P0094487 Cul4b protein_coding protein_coding MGP_WSBEiJ_T0094488.1 MGP_WSBEiJ_G0034776.1 mouse_genomes_project X 33230010 33261721 - MGP_WSBEiJ_P0094488 Cul4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094489.1 MGP_WSBEiJ_G0034776.1 mouse_genomes_project X 33230014 33273102 - MGP_WSBEiJ_P0094489 Cul4b protein_coding protein_coding MGP_WSBEiJ_T0094805.1 MGP_WSBEiJ_G0034881.1 mouse_genomes_project X 63691269 63691948 - MGP_WSBEiJ_P0094805 Gm6812 protein_coding protein_coding MGP_WSBEiJ_T0015882.1 MGP_WSBEiJ_G0014012.1 mouse_genomes_project X 66343407 66343712 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009292.1 MGP_WSBEiJ_G0007457.1 mouse_genomes_project X 157300889 157313142 - Gm15205 lincRNA lincRNA MGP_WSBEiJ_T0095336.1 MGP_WSBEiJ_G0035000.1 mouse_genomes_project X 84669226 84670321 - MGP_WSBEiJ_P0095336 protein_coding protein_coding MGP_WSBEiJ_T0005521.1 MGP_WSBEiJ_G0004650.1 mouse_genomes_project X 94356714 94358443 + Gm14808 antisense antisense MGP_WSBEiJ_T0016306.1 MGP_WSBEiJ_G0014436.1 mouse_genomes_project X 153749077 153749654 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096202.1 MGP_WSBEiJ_G0035267.1 mouse_genomes_project X 142647589 142693724 - MGP_WSBEiJ_P0096202 Lrch2 protein_coding protein_coding MGP_WSBEiJ_T0096203.1 MGP_WSBEiJ_G0035267.1 mouse_genomes_project X 142647594 142740243 - MGP_WSBEiJ_P0096203 Lrch2 protein_coding protein_coding MGP_WSBEiJ_T0096204.1 MGP_WSBEiJ_G0035267.1 mouse_genomes_project X 142647601 142677211 - Lrch2 protein_coding retained_intron MGP_WSBEiJ_T0096205.1 MGP_WSBEiJ_G0035267.1 mouse_genomes_project X 142647601 142740212 - MGP_WSBEiJ_P0096205 Lrch2 protein_coding protein_coding MGP_WSBEiJ_T0096206.1 MGP_WSBEiJ_G0035267.1 mouse_genomes_project X 142649756 142741960 - MGP_WSBEiJ_P0096206 Lrch2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096207.1 MGP_WSBEiJ_G0035267.1 mouse_genomes_project X 142651166 142700601 - MGP_WSBEiJ_P0096207 Lrch2 protein_coding protein_coding MGP_WSBEiJ_T0096208.1 MGP_WSBEiJ_G0035267.1 mouse_genomes_project X 142663702 142685167 - Lrch2 protein_coding processed_transcript MGP_WSBEiJ_T0094457.1 MGP_WSBEiJ_G0034762.1 mouse_genomes_project X 32317988 32318222 + MGP_WSBEiJ_P0094457 protein_coding protein_coding MGP_WSBEiJ_T0094638.1 MGP_WSBEiJ_G0034815.1 mouse_genomes_project X 45020940 45021939 - MGP_WSBEiJ_P0094638 Olfr1324 protein_coding protein_coding MGP_WSBEiJ_T0095803.1 MGP_WSBEiJ_G0035134.1 mouse_genomes_project X 107600113 107668791 + MGP_WSBEiJ_P0095803 2010106E10Rik protein_coding protein_coding MGP_WSBEiJ_T0095804.1 MGP_WSBEiJ_G0035134.1 mouse_genomes_project X 107600114 107668781 + MGP_WSBEiJ_P0095804 2010106E10Rik protein_coding protein_coding MGP_WSBEiJ_T0100178.1 MGP_WSBEiJ_G0038748.1 mouse_genomes_project X 48745941 48746177 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0101162.1 MGP_WSBEiJ_G0039619.1 mouse_genomes_project X 101477570 101481288 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094664.1 MGP_WSBEiJ_G0034826.1 mouse_genomes_project X 47589069 47634092 + MGP_WSBEiJ_P0094664 Phf6 protein_coding protein_coding MGP_WSBEiJ_T0094665.1 MGP_WSBEiJ_G0034826.1 mouse_genomes_project X 47589100 47625124 + MGP_WSBEiJ_P0094665 Phf6 protein_coding protein_coding MGP_WSBEiJ_T0094666.1 MGP_WSBEiJ_G0034826.1 mouse_genomes_project X 47601277 47617263 + Phf6 protein_coding processed_transcript MGP_WSBEiJ_T0094667.1 MGP_WSBEiJ_G0034826.1 mouse_genomes_project X 47601277 47617244 + Phf6 protein_coding processed_transcript MGP_WSBEiJ_T0015951.1 MGP_WSBEiJ_G0014081.1 mouse_genomes_project X 83539925 83541047 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015767.1 MGP_WSBEiJ_G0013897.1 mouse_genomes_project X 39182784 39183124 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010999.1 MGP_WSBEiJ_G0009156.1 mouse_genomes_project X 89314237 89314347 - Gm44477 miRNA miRNA MGP_WSBEiJ_T0095908.1 MGP_WSBEiJ_G0035171.1 mouse_genomes_project X 129515880 129520235 - MGP_WSBEiJ_P0095908 protein_coding protein_coding MGP_WSBEiJ_T0016293.1 MGP_WSBEiJ_G0014423.1 mouse_genomes_project X 151961893 151962862 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095504.1 MGP_WSBEiJ_G0035049.1 mouse_genomes_project X 95515972 95519028 - Pdzd11 protein_coding retained_intron MGP_WSBEiJ_T0095505.1 MGP_WSBEiJ_G0035049.1 mouse_genomes_project X 95515975 95519658 - MGP_WSBEiJ_P0095505 Pdzd11 protein_coding protein_coding MGP_WSBEiJ_T0095506.1 MGP_WSBEiJ_G0035049.1 mouse_genomes_project X 95515997 95519025 - MGP_WSBEiJ_P0095506 Pdzd11 protein_coding protein_coding MGP_WSBEiJ_T0095507.1 MGP_WSBEiJ_G0035049.1 mouse_genomes_project X 95516466 95519361 - Pdzd11 protein_coding processed_transcript MGP_WSBEiJ_T0096560.1 MGP_WSBEiJ_G0035345.1 mouse_genomes_project X 159672702 159725353 + MGP_WSBEiJ_P0096560 Ace2 protein_coding protein_coding MGP_WSBEiJ_T0096561.1 MGP_WSBEiJ_G0035345.1 mouse_genomes_project X 159673848 159725353 + MGP_WSBEiJ_P0096561 Ace2 protein_coding protein_coding MGP_WSBEiJ_T0096562.1 MGP_WSBEiJ_G0035345.1 mouse_genomes_project X 159695841 159722757 + MGP_WSBEiJ_P0096562 Ace2 protein_coding protein_coding MGP_WSBEiJ_T0011581.1 MGP_WSBEiJ_G0009738.1 mouse_genomes_project X 140032409 140032731 + Gm26024 misc_RNA misc_RNA MGP_WSBEiJ_T0016273.1 MGP_WSBEiJ_G0014403.1 mouse_genomes_project X 146838229 146838385 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095826.1 MGP_WSBEiJ_G0035141.1 mouse_genomes_project X 109997717 109998646 + MGP_WSBEiJ_P0095826 Ube2dnl2 protein_coding protein_coding MGP_WSBEiJ_T0010951.1 MGP_WSBEiJ_G0009108.1 mouse_genomes_project X 47395050 47395134 - Mir19b-2 miRNA miRNA MGP_WSBEiJ_T0097148.1 MGP_WSBEiJ_G0035829.1 mouse_genomes_project X 97832846 97832947 - Gm24509 rRNA rRNA MGP_WSBEiJ_T0010937.1 MGP_WSBEiJ_G0009094.1 mouse_genomes_project X 15547659 15547716 - Mir5617 miRNA miRNA MGP_WSBEiJ_T0094258.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8329419 8617737 - MGP_WSBEiJ_P0094258 Cask protein_coding unknown_likely_coding MGP_WSBEiJ_T0094259.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8329423 8671070 - MGP_WSBEiJ_P0094259 Cask protein_coding protein_coding MGP_WSBEiJ_T0094260.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8329423 8671033 - MGP_WSBEiJ_P0094260 Cask protein_coding protein_coding MGP_WSBEiJ_T0094261.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8329423 8606638 - MGP_WSBEiJ_P0094261 Cask protein_coding protein_coding MGP_WSBEiJ_T0094262.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8333672 8671048 - MGP_WSBEiJ_P0094262 Cask protein_coding protein_coding MGP_WSBEiJ_T0094263.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8334123 8339112 - MGP_WSBEiJ_P0094263 Cask protein_coding protein_coding MGP_WSBEiJ_T0094264.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8334421 8350016 - MGP_WSBEiJ_P0094264 Cask protein_coding protein_coding MGP_WSBEiJ_T0094265.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8345683 8377054 - MGP_WSBEiJ_P0094265 Cask protein_coding protein_coding MGP_WSBEiJ_T0094266.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8372008 8671070 - Cask protein_coding retained_intron MGP_WSBEiJ_T0094267.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8389777 8493236 - MGP_WSBEiJ_P0094267 Cask protein_coding protein_coding MGP_WSBEiJ_T0094268.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8445562 8670580 - MGP_WSBEiJ_P0094268 Cask protein_coding protein_coding MGP_WSBEiJ_T0094272.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8531412 8675848 - Cask protein_coding processed_transcript MGP_WSBEiJ_T0094273.1 MGP_WSBEiJ_G0034688.1 mouse_genomes_project X 8670581 8671227 - Cask protein_coding processed_transcript MGP_WSBEiJ_T0016143.1 MGP_WSBEiJ_G0014273.1 mouse_genomes_project X 116431092 116431739 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015857.1 MGP_WSBEiJ_G0013987.1 mouse_genomes_project X 61632274 61633467 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015935.1 MGP_WSBEiJ_G0014065.1 mouse_genomes_project X 80496985 80497353 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101150.1 MGP_WSBEiJ_G0039607.1 mouse_genomes_project X 81118708 81119740 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016113.1 MGP_WSBEiJ_G0014243.1 mouse_genomes_project X 110039892 110040351 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096400.1 MGP_WSBEiJ_G0035307.1 mouse_genomes_project X 151083379 151289489 + Gm15155 protein_coding processed_transcript MGP_WSBEiJ_T0096401.1 MGP_WSBEiJ_G0035307.1 mouse_genomes_project X 151083413 151777548 + MGP_WSBEiJ_P0096401 Gm15155 protein_coding protein_coding MGP_WSBEiJ_T0095941.1 MGP_WSBEiJ_G0035180.1 mouse_genomes_project X 129811128 129814509 - MGP_WSBEiJ_P0095941 Armcx2 protein_coding protein_coding MGP_WSBEiJ_T0095942.1 MGP_WSBEiJ_G0035180.1 mouse_genomes_project X 129811130 129816205 - MGP_WSBEiJ_P0095942 Armcx2 protein_coding protein_coding MGP_WSBEiJ_T0095943.1 MGP_WSBEiJ_G0035180.1 mouse_genomes_project X 129811130 129815980 - MGP_WSBEiJ_P0095943 Armcx2 protein_coding protein_coding MGP_WSBEiJ_T0095944.1 MGP_WSBEiJ_G0035180.1 mouse_genomes_project X 129811130 129816205 - MGP_WSBEiJ_P0095944 Armcx2 protein_coding protein_coding MGP_WSBEiJ_T0095945.1 MGP_WSBEiJ_G0035180.1 mouse_genomes_project X 129813468 129814495 - Armcx2 protein_coding processed_transcript MGP_WSBEiJ_T0095946.1 MGP_WSBEiJ_G0035180.1 mouse_genomes_project X 129814243 129814926 - Armcx2 protein_coding processed_transcript MGP_WSBEiJ_T0095947.1 MGP_WSBEiJ_G0035180.1 mouse_genomes_project X 129814870 129815945 - Armcx2 protein_coding processed_transcript MGP_WSBEiJ_T0015991.1 MGP_WSBEiJ_G0014121.1 mouse_genomes_project X 89536779 89537257 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094716.1 MGP_WSBEiJ_G0034849.1 mouse_genomes_project X 51665220 51689862 - MGP_WSBEiJ_P0094716 Mtap7d3 protein_coding protein_coding MGP_WSBEiJ_T0094717.1 MGP_WSBEiJ_G0034849.1 mouse_genomes_project X 51676823 51689850 - MGP_WSBEiJ_P0094717 Mtap7d3 protein_coding protein_coding MGP_WSBEiJ_T0095986.1 MGP_WSBEiJ_G0035194.1 mouse_genomes_project X 131120184 131133356 - MGP_WSBEiJ_P0095986 Nxf3 protein_coding protein_coding MGP_WSBEiJ_T0095987.1 MGP_WSBEiJ_G0035194.1 mouse_genomes_project X 131127695 131133343 - MGP_WSBEiJ_P0095987 Nxf3 protein_coding protein_coding MGP_WSBEiJ_T0009299.1 MGP_WSBEiJ_G0007462.1 mouse_genomes_project X 162559530 162574352 - Gm15232 lincRNA lincRNA MGP_WSBEiJ_T0015956.1 MGP_WSBEiJ_G0014086.1 mouse_genomes_project X 84192032 84192371 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015689.1 MGP_WSBEiJ_G0013819.1 mouse_genomes_project X 8187205 8188018 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005510.1 MGP_WSBEiJ_G0004640.1 mouse_genomes_project X 64720256 64935886 - antisense antisense MGP_WSBEiJ_T0011026.1 MGP_WSBEiJ_G0009183.1 mouse_genomes_project X 142190074 142190182 + Mir764 miRNA miRNA MGP_WSBEiJ_T0095801.1 MGP_WSBEiJ_G0035133.1 mouse_genomes_project X 107495476 107513936 - MGP_WSBEiJ_P0095801 Satl1 protein_coding protein_coding MGP_WSBEiJ_T0095802.1 MGP_WSBEiJ_G0035133.1 mouse_genomes_project X 107495478 107514893 - MGP_WSBEiJ_P0095802 Satl1 protein_coding protein_coding MGP_WSBEiJ_T0096659.1 MGP_WSBEiJ_G0035371.1 mouse_genomes_project X 164743167 164804332 - MGP_WSBEiJ_P0096659 Hccs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096660.1 MGP_WSBEiJ_G0035371.1 mouse_genomes_project X 164794810 164804240 - MGP_WSBEiJ_P0096660 Hccs protein_coding protein_coding MGP_WSBEiJ_T0096661.1 MGP_WSBEiJ_G0035371.1 mouse_genomes_project X 164794810 164804254 - MGP_WSBEiJ_P0096661 Hccs protein_coding protein_coding MGP_WSBEiJ_T0095678.1 MGP_WSBEiJ_G0035099.1 mouse_genomes_project X 100878435 100889077 + MGP_WSBEiJ_P0095678 Fgf16 protein_coding protein_coding MGP_WSBEiJ_T0099950.1 MGP_WSBEiJ_G0038613.1 mouse_genomes_project X 152866168 152866304 + Gm24281 snoRNA snoRNA MGP_WSBEiJ_T0098655.1 MGP_WSBEiJ_G0037318.1 mouse_genomes_project X 15281410 15281583 - Gm23628 snRNA snRNA MGP_WSBEiJ_T0016286.1 MGP_WSBEiJ_G0014416.1 mouse_genomes_project X 150427941 150431620 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094284.1 MGP_WSBEiJ_G0034697.1 mouse_genomes_project X 12309294 12327406 - MGP_WSBEiJ_P0094284 Fundc1 protein_coding protein_coding MGP_WSBEiJ_T0094285.1 MGP_WSBEiJ_G0034697.1 mouse_genomes_project X 12311556 12326850 - Fundc1 protein_coding processed_transcript MGP_WSBEiJ_T0094286.1 MGP_WSBEiJ_G0034697.1 mouse_genomes_project X 12311556 12327479 - MGP_WSBEiJ_P0094286 Fundc1 protein_coding protein_coding MGP_WSBEiJ_T0098719.1 MGP_WSBEiJ_G0037382.1 mouse_genomes_project X 158658422 158658529 - Gm22746 snRNA snRNA MGP_WSBEiJ_T0098677.1 MGP_WSBEiJ_G0037340.1 mouse_genomes_project X 69919519 69919626 - Gm25629 snRNA snRNA MGP_WSBEiJ_T0015736.1 MGP_WSBEiJ_G0013866.1 mouse_genomes_project X 33096994 33098130 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015845.1 MGP_WSBEiJ_G0013975.1 mouse_genomes_project X 57513194 57513764 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095770.1 MGP_WSBEiJ_G0035122.1 mouse_genomes_project X 104145605 104154351 - MGP_WSBEiJ_P0095770 Hmgn5 protein_coding protein_coding MGP_WSBEiJ_T0101139.1 MGP_WSBEiJ_G0039596.1 mouse_genomes_project X 60934069 60934334 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098684.1 MGP_WSBEiJ_G0037347.1 mouse_genomes_project X 96138642 96138776 + Gm22472 snRNA snRNA MGP_WSBEiJ_T0016079.1 MGP_WSBEiJ_G0014209.1 mouse_genomes_project X 102508044 102508748 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015698.1 MGP_WSBEiJ_G0013828.1 mouse_genomes_project X 11351899 11361949 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097158.1 MGP_WSBEiJ_G0035839.1 mouse_genomes_project X 163385357 163385467 + Gm24772 rRNA rRNA MGP_WSBEiJ_T0016279.1 MGP_WSBEiJ_G0014409.1 mouse_genomes_project X 148589396 148589670 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015791.1 MGP_WSBEiJ_G0013921.1 mouse_genomes_project X 45836077 45836475 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094025.1 MGP_WSBEiJ_G0034622.1 mouse_genomes_project X 2269814 2274334 - protein_coding retained_intron MGP_WSBEiJ_T0094027.1 MGP_WSBEiJ_G0034622.1 mouse_genomes_project X 2269814 2274352 - MGP_WSBEiJ_P0094027 protein_coding protein_coding MGP_WSBEiJ_T0094028.1 MGP_WSBEiJ_G0034622.1 mouse_genomes_project X 2271171 2274275 - protein_coding retained_intron MGP_WSBEiJ_T0015964.1 MGP_WSBEiJ_G0014094.1 mouse_genomes_project X 86050319 86053170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015686.1 MGP_WSBEiJ_G0013816.1 mouse_genomes_project X 7770724 7771081 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015946.1 MGP_WSBEiJ_G0014076.1 mouse_genomes_project X 83182129 83182440 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094257.1 MGP_WSBEiJ_G0034687.1 mouse_genomes_project X 8278550 8301728 + MGP_WSBEiJ_P0094257 Nyx protein_coding protein_coding MGP_WSBEiJ_T0002432.1 MGP_WSBEiJ_G0002348.1 mouse_genomes_project X 36816745 36818999 - TEC TEC MGP_WSBEiJ_T0101131.1 MGP_WSBEiJ_G0039588.1 mouse_genomes_project X 30472152 30487771 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005539.1 MGP_WSBEiJ_G0004662.1 mouse_genomes_project X 162832119 162835068 + Gm15239 antisense antisense MGP_WSBEiJ_T0016102.1 MGP_WSBEiJ_G0014232.1 mouse_genomes_project X 108051504 108051712 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095663.1 MGP_WSBEiJ_G0035091.1 mouse_genomes_project X 99049343 99082093 - MGP_WSBEiJ_P0095663 Rlim protein_coding protein_coding MGP_WSBEiJ_T0095664.1 MGP_WSBEiJ_G0035091.1 mouse_genomes_project X 99049343 99082093 - MGP_WSBEiJ_P0095664 Rlim protein_coding protein_coding MGP_WSBEiJ_T0095665.1 MGP_WSBEiJ_G0035091.1 mouse_genomes_project X 99078608 99082093 - Rlim protein_coding retained_intron MGP_WSBEiJ_T0094467.1 MGP_WSBEiJ_G0034770.1 mouse_genomes_project X 32782589 32789590 - MGP_WSBEiJ_P0094467 Rhox12 protein_coding protein_coding MGP_WSBEiJ_T0094468.1 MGP_WSBEiJ_G0034770.1 mouse_genomes_project X 32782690 32787111 - MGP_WSBEiJ_P0094468 Rhox12 protein_coding protein_coding MGP_WSBEiJ_T0094469.1 MGP_WSBEiJ_G0034770.1 mouse_genomes_project X 32784092 32789470 - MGP_WSBEiJ_P0094469 Rhox12 protein_coding protein_coding MGP_WSBEiJ_T0097145.1 MGP_WSBEiJ_G0035826.1 mouse_genomes_project X 78005282 78005399 + n-R5s9 rRNA rRNA MGP_WSBEiJ_T0015666.1 MGP_WSBEiJ_G0013796.1 mouse_genomes_project X 3337336 3337696 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094437.1 MGP_WSBEiJ_G0034745.1 mouse_genomes_project X 31800411 31820518 - MGP_WSBEiJ_P0094437 Upf3b protein_coding protein_coding MGP_WSBEiJ_T0094438.1 MGP_WSBEiJ_G0034745.1 mouse_genomes_project X 31804409 31814834 - MGP_WSBEiJ_P0094438 Upf3b protein_coding protein_coding MGP_WSBEiJ_T0094439.1 MGP_WSBEiJ_G0034745.1 mouse_genomes_project X 31807905 31820518 - Upf3b protein_coding processed_transcript MGP_WSBEiJ_T0015812.1 MGP_WSBEiJ_G0013942.1 mouse_genomes_project X 52537208 52538374 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095194.1 MGP_WSBEiJ_G0034954.1 mouse_genomes_project X 69678993 69680608 - MGP_WSBEiJ_P0095194 protein_coding protein_coding MGP_WSBEiJ_T0016275.1 MGP_WSBEiJ_G0014405.1 mouse_genomes_project X 147109074 147109461 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094295.1 MGP_WSBEiJ_G0034701.1 mouse_genomes_project X 14731512 14774713 + MGP_WSBEiJ_P0094295 Chst7 protein_coding protein_coding MGP_WSBEiJ_T0095044.1 MGP_WSBEiJ_G0034933.1 mouse_genomes_project X 68906260 68968251 - MGP_WSBEiJ_P0095044 Mecp2 protein_coding protein_coding MGP_WSBEiJ_T0095045.1 MGP_WSBEiJ_G0034933.1 mouse_genomes_project X 68906496 68962609 - MGP_WSBEiJ_P0095045 Mecp2 protein_coding protein_coding MGP_WSBEiJ_T0095046.1 MGP_WSBEiJ_G0034933.1 mouse_genomes_project X 68914959 68968272 - MGP_WSBEiJ_P0095046 Mecp2 protein_coding protein_coding MGP_WSBEiJ_T0095047.1 MGP_WSBEiJ_G0034933.1 mouse_genomes_project X 68914960 68968194 - MGP_WSBEiJ_P0095047 Mecp2 protein_coding protein_coding MGP_WSBEiJ_T0095048.1 MGP_WSBEiJ_G0034933.1 mouse_genomes_project X 68915341 68968192 - MGP_WSBEiJ_P0095048 Mecp2 protein_coding protein_coding MGP_WSBEiJ_T0095049.1 MGP_WSBEiJ_G0034933.1 mouse_genomes_project X 68963608 68968179 - Mecp2 protein_coding retained_intron MGP_WSBEiJ_T0095846.1 MGP_WSBEiJ_G0035152.1 mouse_genomes_project X 122395913 122397519 + MGP_WSBEiJ_P0095846 4921511C20Rik protein_coding protein_coding MGP_WSBEiJ_T0095923.1 MGP_WSBEiJ_G0035175.1 mouse_genomes_project X 129583185 129588107 + MGP_WSBEiJ_P0095923 Hnrnph2 protein_coding protein_coding MGP_WSBEiJ_T0015934.1 MGP_WSBEiJ_G0014064.1 mouse_genomes_project X 80415765 80416351 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010969.1 MGP_WSBEiJ_G0009126.1 mouse_genomes_project X 61651275 61651340 - Mir742 miRNA miRNA MGP_WSBEiJ_T0015840.1 MGP_WSBEiJ_G0013970.1 mouse_genomes_project X 57074682 57075184 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015952.1 MGP_WSBEiJ_G0014082.1 mouse_genomes_project X 83796363 83797128 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097149.1 MGP_WSBEiJ_G0035830.1 mouse_genomes_project X 131341602 131341721 + n-R5s12 rRNA rRNA MGP_WSBEiJ_T0015945.1 MGP_WSBEiJ_G0014075.1 mouse_genomes_project X 83176694 83177036 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095022.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68892809 68903587 - MGP_WSBEiJ_P0095022 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095023.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68892813 68903584 - MGP_WSBEiJ_P0095023 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095024.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68892821 68903584 - MGP_WSBEiJ_P0095024 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095025.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68892821 68903584 - MGP_WSBEiJ_P0095025 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095026.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68893699 68903495 - Irak1 protein_coding retained_intron MGP_WSBEiJ_T0095027.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68893699 68903495 - Irak1 protein_coding retained_intron MGP_WSBEiJ_T0095028.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68893864 68903582 - MGP_WSBEiJ_P0095028 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095029.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68894251 68897228 - MGP_WSBEiJ_P0095029 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095030.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68894265 68898835 - MGP_WSBEiJ_P0095030 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095031.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68894333 68903414 - MGP_WSBEiJ_P0095031 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095032.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68894333 68903414 - MGP_WSBEiJ_P0095032 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095033.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68895441 68899882 - MGP_WSBEiJ_P0095033 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095034.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68896023 68901390 - MGP_WSBEiJ_P0095034 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095035.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68899893 68901545 - Irak1 protein_coding retained_intron MGP_WSBEiJ_T0095036.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68899893 68901985 - MGP_WSBEiJ_P0095036 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095037.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68901080 68902067 - MGP_WSBEiJ_P0095037 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095038.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68901122 68901838 - MGP_WSBEiJ_P0095038 Irak1 protein_coding protein_coding MGP_WSBEiJ_T0095039.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68901131 68903396 - Irak1 protein_coding processed_transcript MGP_WSBEiJ_T0095040.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68901511 68903477 - Irak1 protein_coding retained_intron MGP_WSBEiJ_T0095041.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68901526 68903045 - Irak1 protein_coding retained_intron MGP_WSBEiJ_T0095042.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68901639 68903177 - Irak1 protein_coding processed_transcript MGP_WSBEiJ_T0095043.1 MGP_WSBEiJ_G0034932.1 mouse_genomes_project X 68901988 68903500 - Irak1 protein_coding retained_intron MGP_WSBEiJ_T0096397.1 MGP_WSBEiJ_G0035306.1 mouse_genomes_project X 151032331 151081964 - MGP_WSBEiJ_P0096397 Ptchd1 protein_coding protein_coding MGP_WSBEiJ_T0096398.1 MGP_WSBEiJ_G0035306.1 mouse_genomes_project X 151032417 151081757 - MGP_WSBEiJ_P0096398 Ptchd1 protein_coding protein_coding MGP_WSBEiJ_T0096399.1 MGP_WSBEiJ_G0035306.1 mouse_genomes_project X 151045780 151082453 - Ptchd1 protein_coding processed_transcript MGP_WSBEiJ_T0095962.1 MGP_WSBEiJ_G0035185.1 mouse_genomes_project X 130680967 130722042 - MGP_WSBEiJ_P0095962 Tcp11x2 protein_coding protein_coding MGP_WSBEiJ_T0016352.1 MGP_WSBEiJ_G0014482.1 mouse_genomes_project X 164016493 164016826 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094421.1 MGP_WSBEiJ_G0034740.1 mouse_genomes_project X 31570154 31570727 + Ube2a protein_coding processed_transcript MGP_WSBEiJ_T0094422.1 MGP_WSBEiJ_G0034740.1 mouse_genomes_project X 31570586 31571624 + Ube2a protein_coding retained_intron MGP_WSBEiJ_T0094423.1 MGP_WSBEiJ_G0034740.1 mouse_genomes_project X 31570586 31583857 + MGP_WSBEiJ_P0094423 Ube2a protein_coding protein_coding MGP_WSBEiJ_T0094424.1 MGP_WSBEiJ_G0034740.1 mouse_genomes_project X 31570596 31584531 + MGP_WSBEiJ_P0094424 Ube2a protein_coding protein_coding MGP_WSBEiJ_T0094425.1 MGP_WSBEiJ_G0034740.1 mouse_genomes_project X 31570741 31584836 + MGP_WSBEiJ_P0094425 Ube2a protein_coding protein_coding MGP_WSBEiJ_T0094426.1 MGP_WSBEiJ_G0034740.1 mouse_genomes_project X 31582083 31583862 + Ube2a protein_coding retained_intron MGP_WSBEiJ_T0015744.1 MGP_WSBEiJ_G0013874.1 mouse_genomes_project X 34487997 34488567 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097230.1 MGP_WSBEiJ_G0035911.1 mouse_genomes_project X 116339053 116339177 - Gm25825 scaRNA scaRNA MGP_WSBEiJ_T0095239.1 MGP_WSBEiJ_G0034964.1 mouse_genomes_project X 70333834 70374414 + MGP_WSBEiJ_P0095239 Brcc3 protein_coding protein_coding MGP_WSBEiJ_T0095240.1 MGP_WSBEiJ_G0034964.1 mouse_genomes_project X 70333903 70372392 + MGP_WSBEiJ_P0095240 Brcc3 protein_coding protein_coding MGP_WSBEiJ_T0095241.1 MGP_WSBEiJ_G0034964.1 mouse_genomes_project X 70333906 70371139 + Brcc3 protein_coding retained_intron MGP_WSBEiJ_T0095242.1 MGP_WSBEiJ_G0034964.1 mouse_genomes_project X 70333916 70372115 + MGP_WSBEiJ_P0095242 Brcc3 protein_coding protein_coding MGP_WSBEiJ_T0095243.1 MGP_WSBEiJ_G0034964.1 mouse_genomes_project X 70333922 70358396 + MGP_WSBEiJ_P0095243 Brcc3 protein_coding protein_coding MGP_WSBEiJ_T0095244.1 MGP_WSBEiJ_G0034964.1 mouse_genomes_project X 70334513 70355885 + MGP_WSBEiJ_P0095244 Brcc3 protein_coding protein_coding MGP_WSBEiJ_T0095245.1 MGP_WSBEiJ_G0034964.1 mouse_genomes_project X 70354386 70371631 + Brcc3 protein_coding retained_intron MGP_WSBEiJ_T0100373.1 MGP_WSBEiJ_G0038838.1 mouse_genomes_project X 98227108 98300752 - unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100374.1 MGP_WSBEiJ_G0038838.1 mouse_genomes_project X 98275584 98300752 - unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0100375.1 MGP_WSBEiJ_G0038838.1 mouse_genomes_project X 98275584 98365297 - unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100376.1 MGP_WSBEiJ_G0038838.1 mouse_genomes_project X 98275650 98297185 - unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100377.1 MGP_WSBEiJ_G0038838.1 mouse_genomes_project X 98276938 98300744 - unitary_pseudogene retained_intron MGP_WSBEiJ_T0100378.1 MGP_WSBEiJ_G0038838.1 mouse_genomes_project X 98278478 98346958 - unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100379.1 MGP_WSBEiJ_G0038838.1 mouse_genomes_project X 98278489 98335490 - unitary_pseudogene processed_transcript MGP_WSBEiJ_T0016180.1 MGP_WSBEiJ_G0014310.1 mouse_genomes_project X 129761649 129762883 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095495.1 MGP_WSBEiJ_G0035047.1 mouse_genomes_project X 95482934 95487642 - MGP_WSBEiJ_P0095495 P2ry4 protein_coding protein_coding MGP_WSBEiJ_T0096119.1 MGP_WSBEiJ_G0035241.1 mouse_genomes_project X 136103229 136137411 + MGP_WSBEiJ_P0096119 Vsig1 protein_coding protein_coding MGP_WSBEiJ_T0096120.1 MGP_WSBEiJ_G0035241.1 mouse_genomes_project X 136119753 136136164 + Vsig1 protein_coding processed_transcript MGP_WSBEiJ_T0094591.1 MGP_WSBEiJ_G0034800.1 mouse_genomes_project X 43109634 43155405 - MGP_WSBEiJ_P0094591 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094592.1 MGP_WSBEiJ_G0034800.1 mouse_genomes_project X 43115242 43164996 - MGP_WSBEiJ_P0094592 protein_coding protein_coding MGP_WSBEiJ_T0094939.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68649461 68657412 - Idh3g protein_coding retained_intron MGP_WSBEiJ_T0094940.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68649461 68657412 - MGP_WSBEiJ_P0094940 Idh3g protein_coding protein_coding MGP_WSBEiJ_T0094941.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68649541 68651396 - Idh3g protein_coding retained_intron MGP_WSBEiJ_T0094942.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68650168 68651195 - Idh3g protein_coding retained_intron MGP_WSBEiJ_T0094943.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68650534 68651311 - Idh3g protein_coding retained_intron MGP_WSBEiJ_T0094944.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68650572 68657137 - Idh3g protein_coding processed_transcript MGP_WSBEiJ_T0094945.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68650919 68652206 - Idh3g protein_coding retained_intron MGP_WSBEiJ_T0094946.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68651086 68652718 - Idh3g protein_coding retained_intron MGP_WSBEiJ_T0094947.1 MGP_WSBEiJ_G0034923.1 mouse_genomes_project X 68651477 68652883 - Idh3g protein_coding processed_transcript MGP_WSBEiJ_T0095866.1 MGP_WSBEiJ_G0035159.1 mouse_genomes_project X 128865652 128892555 + MGP_WSBEiJ_P0095866 Srpx2 protein_coding protein_coding MGP_WSBEiJ_T0016035.1 MGP_WSBEiJ_G0014165.1 mouse_genomes_project X 98006016 98006774 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094688.1 MGP_WSBEiJ_G0034839.1 mouse_genomes_project X 48509135 48511482 - MGP_WSBEiJ_P0094688 Zfp36l3 protein_coding protein_coding MGP_WSBEiJ_T0016140.1 MGP_WSBEiJ_G0014270.1 mouse_genomes_project X 116002822 116003995 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015955.1 MGP_WSBEiJ_G0014085.1 mouse_genomes_project X 83907079 83908559 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005501.1 MGP_WSBEiJ_G0004633.1 mouse_genomes_project X 46949013 46987823 + Gm14582 antisense antisense MGP_WSBEiJ_T0096055.1 MGP_WSBEiJ_G0035222.1 mouse_genomes_project X 134206344 134213494 + MGP_WSBEiJ_P0096055 4930513O06Rik protein_coding protein_coding MGP_WSBEiJ_T0018009.1 MGP_WSBEiJ_G0015194.1 mouse_genomes_project X 45151965 45161321 - processed_transcript processed_transcript MGP_WSBEiJ_T0018010.1 MGP_WSBEiJ_G0015194.1 mouse_genomes_project X 45151965 45234679 - processed_transcript processed_transcript MGP_WSBEiJ_T0018011.1 MGP_WSBEiJ_G0015194.1 mouse_genomes_project X 45151972 45159309 - processed_transcript processed_transcript MGP_WSBEiJ_T0018012.1 MGP_WSBEiJ_G0015194.1 mouse_genomes_project X 45154792 45157465 - processed_transcript processed_transcript MGP_WSBEiJ_T0018013.1 MGP_WSBEiJ_G0015194.1 mouse_genomes_project X 45220364 45234721 - processed_transcript processed_transcript MGP_WSBEiJ_T0018014.1 MGP_WSBEiJ_G0015194.1 mouse_genomes_project X 45225893 45234739 - processed_transcript processed_transcript MGP_WSBEiJ_T0018015.1 MGP_WSBEiJ_G0015194.1 mouse_genomes_project X 45225893 45234729 - processed_transcript processed_transcript MGP_WSBEiJ_T0094390.1 MGP_WSBEiJ_G0034728.1 mouse_genomes_project X 18621809 18623042 - MGP_WSBEiJ_P0094390 Gm4985 protein_coding protein_coding MGP_WSBEiJ_T0016307.1 MGP_WSBEiJ_G0014437.1 mouse_genomes_project X 153939793 153940370 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011583.1 MGP_WSBEiJ_G0009740.1 mouse_genomes_project X 157785694 157785968 - Gm23867 misc_RNA misc_RNA MGP_WSBEiJ_T0096524.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158403677 158484066 + MGP_WSBEiJ_P0096524 Ctps2 protein_coding protein_coding MGP_WSBEiJ_T0096525.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158403684 158424445 + Ctps2 protein_coding processed_transcript MGP_WSBEiJ_T0096526.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158403684 158424120 + Ctps2 protein_coding processed_transcript MGP_WSBEiJ_T0096527.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158404044 158441332 + MGP_WSBEiJ_P0096527 Ctps2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096528.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158404044 158533229 + MGP_WSBEiJ_P0096528 Ctps2 protein_coding protein_coding MGP_WSBEiJ_T0096529.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158404071 158533412 + MGP_WSBEiJ_P0096529 Ctps2 protein_coding protein_coding MGP_WSBEiJ_T0096530.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158404208 158533405 + MGP_WSBEiJ_P0096530 Ctps2 protein_coding protein_coding MGP_WSBEiJ_T0096531.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158404224 158406014 + Ctps2 protein_coding processed_transcript MGP_WSBEiJ_T0096532.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158404309 158533229 + MGP_WSBEiJ_P0096532 Ctps2 protein_coding protein_coding MGP_WSBEiJ_T0096533.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158404610 158425316 + Ctps2 protein_coding processed_transcript MGP_WSBEiJ_T0096534.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158432565 158441240 + Ctps2 protein_coding processed_transcript MGP_WSBEiJ_T0096535.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158445687 158480728 + Ctps2 protein_coding processed_transcript MGP_WSBEiJ_T0096536.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158446068 158446358 + Ctps2 protein_coding processed_transcript MGP_WSBEiJ_T0096537.1 MGP_WSBEiJ_G0035336.1 mouse_genomes_project X 158446174 158535416 + MGP_WSBEiJ_P0096537 Ctps2 protein_coding protein_coding MGP_WSBEiJ_T0097227.1 MGP_WSBEiJ_G0035908.1 mouse_genomes_project X 88450659 88450798 - Gm23557 scaRNA scaRNA MGP_WSBEiJ_T0010960.1 MGP_WSBEiJ_G0009117.1 mouse_genomes_project X 47736074 47736145 - Mir503 miRNA miRNA MGP_WSBEiJ_T0015684.1 MGP_WSBEiJ_G0013814.1 mouse_genomes_project X 7740235 7740918 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096075.1 MGP_WSBEiJ_G0035230.1 mouse_genomes_project X 134931087 134934193 - MGP_WSBEiJ_P0096075 Ripply1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0095410.1 MGP_WSBEiJ_G0035022.1 mouse_genomes_project X 90408638 90416439 - MGP_WSBEiJ_P0095410 Asb12 protein_coding protein_coding MGP_WSBEiJ_T0016188.1 MGP_WSBEiJ_G0014318.1 mouse_genomes_project X 131032014 131032734 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015797.1 MGP_WSBEiJ_G0013927.1 mouse_genomes_project X 47543849 47545247 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015783.1 MGP_WSBEiJ_G0013913.1 mouse_genomes_project X 43856398 43856798 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011585.1 MGP_WSBEiJ_G0009742.1 mouse_genomes_project X 158182820 158183135 + Gm25557 misc_RNA misc_RNA MGP_WSBEiJ_T0015690.1 MGP_WSBEiJ_G0013820.1 mouse_genomes_project X 8302912 8303448 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095625.1 MGP_WSBEiJ_G0035075.1 mouse_genomes_project X 97189248 97194069 - MGP_WSBEiJ_P0095625 Cited1 protein_coding protein_coding MGP_WSBEiJ_T0095626.1 MGP_WSBEiJ_G0035075.1 mouse_genomes_project X 97189271 97193740 - MGP_WSBEiJ_P0095626 Cited1 protein_coding protein_coding MGP_WSBEiJ_T0095627.1 MGP_WSBEiJ_G0035075.1 mouse_genomes_project X 97189581 97192834 - MGP_WSBEiJ_P0095627 Cited1 protein_coding protein_coding MGP_WSBEiJ_T0095628.1 MGP_WSBEiJ_G0035075.1 mouse_genomes_project X 97189688 97192663 - MGP_WSBEiJ_P0095628 Cited1 protein_coding protein_coding MGP_WSBEiJ_T0095629.1 MGP_WSBEiJ_G0035075.1 mouse_genomes_project X 97189753 97193806 - MGP_WSBEiJ_P0095629 Cited1 protein_coding protein_coding MGP_WSBEiJ_T0015712.1 MGP_WSBEiJ_G0013842.1 mouse_genomes_project X 15066578 15067371 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094371.1 MGP_WSBEiJ_G0034720.1 mouse_genomes_project X 15798416 15803789 + MGP_WSBEiJ_P0094371 Ssxa1 protein_coding protein_coding MGP_WSBEiJ_T0094372.1 MGP_WSBEiJ_G0034720.1 mouse_genomes_project X 15800968 15803789 + MGP_WSBEiJ_P0094372 Ssxa1 protein_coding protein_coding MGP_WSBEiJ_T0016038.1 MGP_WSBEiJ_G0014168.1 mouse_genomes_project X 98059247 98060554 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016288.1 MGP_WSBEiJ_G0014418.1 mouse_genomes_project X 150643878 150644508 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095935.1 MGP_WSBEiJ_G0035178.1 mouse_genomes_project X 129750484 129753059 - MGP_WSBEiJ_P0095935 protein_coding protein_coding MGP_WSBEiJ_T0095936.1 MGP_WSBEiJ_G0035178.1 mouse_genomes_project X 129751697 129753075 - protein_coding processed_transcript MGP_WSBEiJ_T0095937.1 MGP_WSBEiJ_G0035178.1 mouse_genomes_project X 129751877 129753089 - protein_coding processed_transcript MGP_WSBEiJ_T0015832.1 MGP_WSBEiJ_G0013962.1 mouse_genomes_project X 56267624 56268181 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094031.1 MGP_WSBEiJ_G0034625.1 mouse_genomes_project X 2301636 2316362 + MGP_WSBEiJ_P0094031 Gpkow protein_coding protein_coding MGP_WSBEiJ_T0094032.1 MGP_WSBEiJ_G0034625.1 mouse_genomes_project X 2308006 2312776 + MGP_WSBEiJ_P0094032 Gpkow protein_coding protein_coding MGP_WSBEiJ_T0094867.1 MGP_WSBEiJ_G0034899.1 mouse_genomes_project X 67109280 67128055 - MGP_WSBEiJ_P0094867 Gabre protein_coding protein_coding MGP_WSBEiJ_T0094868.1 MGP_WSBEiJ_G0034899.1 mouse_genomes_project X 67114653 67123047 - Gabre protein_coding processed_transcript MGP_WSBEiJ_T0094869.1 MGP_WSBEiJ_G0034899.1 mouse_genomes_project X 67122251 67128055 - Gabre protein_coding retained_intron MGP_WSBEiJ_T0095275.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73315525 73451010 - MGP_WSBEiJ_P0095275 Prrg1 protein_coding protein_coding MGP_WSBEiJ_T0095276.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73315525 73451119 - MGP_WSBEiJ_P0095276 Prrg1 protein_coding protein_coding MGP_WSBEiJ_T0095277.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73315525 73451124 - MGP_WSBEiJ_P0095277 Prrg1 protein_coding protein_coding MGP_WSBEiJ_T0095278.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73335831 73451083 - Prrg1 protein_coding processed_transcript MGP_WSBEiJ_T0095279.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73347414 73451010 - Prrg1 protein_coding retained_intron MGP_WSBEiJ_T0095280.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73347426 73451124 - Prrg1 protein_coding retained_intron MGP_WSBEiJ_T0095281.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73350507 73451122 - MGP_WSBEiJ_P0095281 Prrg1 protein_coding protein_coding MGP_WSBEiJ_T0095282.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73384062 73451119 - Prrg1 protein_coding retained_intron MGP_WSBEiJ_T0095283.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73386627 73451118 - Prrg1 protein_coding retained_intron MGP_WSBEiJ_T0095284.1 MGP_WSBEiJ_G0034983.1 mouse_genomes_project X 73387093 73451080 - Prrg1 protein_coding processed_transcript MGP_WSBEiJ_T0016077.1 MGP_WSBEiJ_G0014207.1 mouse_genomes_project X 102435690 102436638 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094301.1 MGP_WSBEiJ_G0034703.1 mouse_genomes_project X 15038678 15076248 + MGP_WSBEiJ_P0094301 Rp2 protein_coding protein_coding MGP_WSBEiJ_T0094302.1 MGP_WSBEiJ_G0034703.1 mouse_genomes_project X 15038678 15076244 + MGP_WSBEiJ_P0094302 Rp2 protein_coding protein_coding MGP_WSBEiJ_T0094303.1 MGP_WSBEiJ_G0034703.1 mouse_genomes_project X 15038756 15076244 + MGP_WSBEiJ_P0094303 Rp2 protein_coding protein_coding MGP_WSBEiJ_T0094304.1 MGP_WSBEiJ_G0034703.1 mouse_genomes_project X 15038772 15081556 + MGP_WSBEiJ_P0094304 Rp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094305.1 MGP_WSBEiJ_G0034703.1 mouse_genomes_project X 15038816 15081533 + MGP_WSBEiJ_P0094305 Rp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0017997.1 MGP_WSBEiJ_G0015186.1 mouse_genomes_project X 2155246 2203494 - Gm36995 processed_transcript retained_intron MGP_WSBEiJ_T0099941.1 MGP_WSBEiJ_G0038604.1 mouse_genomes_project X 137686216 137686342 - Gm25915 snoRNA snoRNA MGP_WSBEiJ_T0016162.1 MGP_WSBEiJ_G0014292.1 mouse_genomes_project X 125506002 125506790 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094450.1 MGP_WSBEiJ_G0034755.1 mouse_genomes_project X 32118328 32119676 + MGP_WSBEiJ_P0094450 protein_coding protein_coding MGP_WSBEiJ_T0095469.1 MGP_WSBEiJ_G0035038.1 mouse_genomes_project X 94016912 94030173 + MGP_WSBEiJ_P0095469 Efnb1 protein_coding protein_coding MGP_WSBEiJ_T0095470.1 MGP_WSBEiJ_G0035038.1 mouse_genomes_project X 94018918 94028412 + Efnb1 protein_coding processed_transcript MGP_WSBEiJ_T0099942.1 MGP_WSBEiJ_G0038605.1 mouse_genomes_project X 138621756 138621885 + Gm23325 snoRNA snoRNA MGP_WSBEiJ_T0101157.1 MGP_WSBEiJ_G0039614.1 mouse_genomes_project X 97657230 97734151 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009240.1 MGP_WSBEiJ_G0007428.1 mouse_genomes_project X 80530821 80532592 + Gm14762 lincRNA lincRNA MGP_WSBEiJ_T0009241.1 MGP_WSBEiJ_G0007428.1 mouse_genomes_project X 80531590 80539713 + Gm14762 lincRNA lincRNA MGP_WSBEiJ_T0094388.1 MGP_WSBEiJ_G0034727.1 mouse_genomes_project X 18547012 18571625 + MGP_WSBEiJ_P0094388 Gm4907 protein_coding protein_coding MGP_WSBEiJ_T0094389.1 MGP_WSBEiJ_G0034727.1 mouse_genomes_project X 18558426 18571515 + MGP_WSBEiJ_P0094389 Gm4907 protein_coding protein_coding MGP_WSBEiJ_T0011000.1 MGP_WSBEiJ_G0009157.1 mouse_genomes_project X 91190647 91190757 + Mir223 miRNA miRNA MGP_WSBEiJ_T0016268.1 MGP_WSBEiJ_G0014398.1 mouse_genomes_project X 146029138 146029733 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094623.1 MGP_WSBEiJ_G0034809.1 mouse_genomes_project X 44134027 44167566 + MGP_WSBEiJ_P0094623 Arhgap36 protein_coding protein_coding MGP_WSBEiJ_T0094624.1 MGP_WSBEiJ_G0034809.1 mouse_genomes_project X 44140540 44171301 + MGP_WSBEiJ_P0094624 Arhgap36 protein_coding protein_coding MGP_WSBEiJ_T0094625.1 MGP_WSBEiJ_G0034809.1 mouse_genomes_project X 44140667 44171299 + MGP_WSBEiJ_P0094625 Arhgap36 protein_coding protein_coding MGP_WSBEiJ_T0094626.1 MGP_WSBEiJ_G0034809.1 mouse_genomes_project X 44156134 44171299 + MGP_WSBEiJ_P0094626 Arhgap36 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094627.1 MGP_WSBEiJ_G0034809.1 mouse_genomes_project X 44156698 44166309 + Arhgap36 protein_coding processed_transcript MGP_WSBEiJ_T0094628.1 MGP_WSBEiJ_G0034809.1 mouse_genomes_project X 44164938 44166514 + Arhgap36 protein_coding processed_transcript MGP_WSBEiJ_T0016070.1 MGP_WSBEiJ_G0014200.1 mouse_genomes_project X 101806244 101806751 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099911.1 MGP_WSBEiJ_G0038574.1 mouse_genomes_project X 63476887 63477015 - Gm22435 snoRNA snoRNA MGP_WSBEiJ_T0096072.1 MGP_WSBEiJ_G0035228.1 mouse_genomes_project X 134832269 134904132 + MGP_WSBEiJ_P0096072 Tbc1d8b protein_coding protein_coding MGP_WSBEiJ_T0096074.1 MGP_WSBEiJ_G0035228.1 mouse_genomes_project X 134886848 134895968 + Tbc1d8b protein_coding processed_transcript MGP_WSBEiJ_T0094283.1 MGP_WSBEiJ_G0034696.1 mouse_genomes_project X 11889994 12078908 - MGP_WSBEiJ_P0094283 Efhc2 protein_coding protein_coding MGP_WSBEiJ_T0009246.1 MGP_WSBEiJ_G0007433.1 mouse_genomes_project X 91877420 91878231 - 1700003E24Rik lincRNA lincRNA MGP_WSBEiJ_T0015742.1 MGP_WSBEiJ_G0013872.1 mouse_genomes_project X 34163329 34163736 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095671.1 MGP_WSBEiJ_G0035094.1 mouse_genomes_project X 99591380 99618049 + MGP_WSBEiJ_P0095671 Uprt protein_coding protein_coding MGP_WSBEiJ_T0095414.1 MGP_WSBEiJ_G0035024.1 mouse_genomes_project X 90656066 90855979 + Zc3h12b protein_coding processed_transcript MGP_WSBEiJ_T0095415.1 MGP_WSBEiJ_G0035024.1 mouse_genomes_project X 90827742 90864230 + MGP_WSBEiJ_P0095415 Zc3h12b protein_coding protein_coding MGP_WSBEiJ_T0095416.1 MGP_WSBEiJ_G0035024.1 mouse_genomes_project X 90831455 90863862 + MGP_WSBEiJ_P0095416 Zc3h12b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0016205.1 MGP_WSBEiJ_G0014335.1 mouse_genomes_project X 133847715 133850425 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097150.1 MGP_WSBEiJ_G0035831.1 mouse_genomes_project X 147103273 147103392 + n-R5s13 rRNA rRNA MGP_WSBEiJ_T0015982.1 MGP_WSBEiJ_G0014112.1 mouse_genomes_project X 88886209 88886711 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016127.1 MGP_WSBEiJ_G0014257.1 mouse_genomes_project X 112915377 112917383 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016316.1 MGP_WSBEiJ_G0014446.1 mouse_genomes_project X 155706598 155706861 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095965.1 MGP_WSBEiJ_G0035187.1 mouse_genomes_project X 130772084 130792032 + Gprasp1 protein_coding processed_transcript MGP_WSBEiJ_T0095967.1 MGP_WSBEiJ_G0035187.1 mouse_genomes_project X 130772084 130834284 + MGP_WSBEiJ_P0095967 Gprasp1 protein_coding protein_coding MGP_WSBEiJ_T0095968.1 MGP_WSBEiJ_G0035187.1 mouse_genomes_project X 130772084 130834284 + MGP_WSBEiJ_P0095968 Gprasp1 protein_coding protein_coding MGP_WSBEiJ_T0095969.1 MGP_WSBEiJ_G0035187.1 mouse_genomes_project X 130772084 130834284 + MGP_WSBEiJ_P0095969 Gprasp1 protein_coding protein_coding MGP_WSBEiJ_T0095970.1 MGP_WSBEiJ_G0035187.1 mouse_genomes_project X 130772086 130810398 + Gprasp1 protein_coding processed_transcript MGP_WSBEiJ_T0095972.1 MGP_WSBEiJ_G0035187.1 mouse_genomes_project X 130827964 130834276 + MGP_WSBEiJ_P0095972 Gprasp1 protein_coding protein_coding MGP_WSBEiJ_T0095050.1 MGP_WSBEiJ_G0034934.1 mouse_genomes_project X 69012274 69038966 + MGP_WSBEiJ_P0095050 Opn1mw protein_coding protein_coding MGP_WSBEiJ_T0095051.1 MGP_WSBEiJ_G0034934.1 mouse_genomes_project X 69012276 69038957 + MGP_WSBEiJ_P0095051 Opn1mw protein_coding protein_coding MGP_WSBEiJ_T0095052.1 MGP_WSBEiJ_G0034934.1 mouse_genomes_project X 69012291 69030918 + Opn1mw protein_coding processed_transcript MGP_WSBEiJ_T0095053.1 MGP_WSBEiJ_G0034934.1 mouse_genomes_project X 69023531 69038962 + Opn1mw protein_coding processed_transcript MGP_WSBEiJ_T0095054.1 MGP_WSBEiJ_G0034934.1 mouse_genomes_project X 69023552 69025495 + Opn1mw protein_coding processed_transcript MGP_WSBEiJ_T0095055.1 MGP_WSBEiJ_G0034934.1 mouse_genomes_project X 69024049 69038962 + MGP_WSBEiJ_P0095055 Opn1mw protein_coding protein_coding MGP_WSBEiJ_T0094570.1 MGP_WSBEiJ_G0034794.1 mouse_genomes_project X 42695165 42704666 - MGP_WSBEiJ_P0094570 Apln protein_coding protein_coding MGP_WSBEiJ_T0005500.1 MGP_WSBEiJ_G0004632.1 mouse_genomes_project X 44019882 44118062 - Gm14697 antisense antisense MGP_WSBEiJ_T0015648.1 MGP_WSBEiJ_G0013778.1 mouse_genomes_project X 310141 312299 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011564.1 MGP_WSBEiJ_G0009721.1 mouse_genomes_project X 98527188 98527314 - Gm27927 misc_RNA misc_RNA MGP_WSBEiJ_T0009233.1 MGP_WSBEiJ_G0007422.1 mouse_genomes_project X 57378473 57384748 - 1700019B21Rik lincRNA lincRNA MGP_WSBEiJ_T0009234.1 MGP_WSBEiJ_G0007422.1 mouse_genomes_project X 57378473 57395731 - 1700019B21Rik lincRNA lincRNA MGP_WSBEiJ_T0098689.1 MGP_WSBEiJ_G0037352.1 mouse_genomes_project X 100987959 100988071 + Gm23656 snRNA snRNA MGP_WSBEiJ_T0096643.1 MGP_WSBEiJ_G0035368.1 mouse_genomes_project X 164124776 164148024 - MGP_WSBEiJ_P0096643 Msl3 protein_coding protein_coding MGP_WSBEiJ_T0096644.1 MGP_WSBEiJ_G0035368.1 mouse_genomes_project X 164127636 164132549 - Msl3 protein_coding retained_intron MGP_WSBEiJ_T0096645.1 MGP_WSBEiJ_G0035368.1 mouse_genomes_project X 164132220 164146713 - Msl3 protein_coding retained_intron MGP_WSBEiJ_T0101164.1 MGP_WSBEiJ_G0039621.1 mouse_genomes_project X 131573151 131575066 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0095075.1 MGP_WSBEiJ_G0034938.1 mouse_genomes_project X 69145809 69149008 + MGP_WSBEiJ_P0095075 Emd protein_coding protein_coding MGP_WSBEiJ_T0095076.1 MGP_WSBEiJ_G0034938.1 mouse_genomes_project X 69145874 69148482 + MGP_WSBEiJ_P0095076 Emd protein_coding protein_coding MGP_WSBEiJ_T0095077.1 MGP_WSBEiJ_G0034938.1 mouse_genomes_project X 69145883 69146808 + Emd protein_coding processed_transcript MGP_WSBEiJ_T0095078.1 MGP_WSBEiJ_G0034938.1 mouse_genomes_project X 69145932 69152119 + MGP_WSBEiJ_P0095078 Emd protein_coding protein_coding MGP_WSBEiJ_T0095079.1 MGP_WSBEiJ_G0034938.1 mouse_genomes_project X 69145938 69148444 + MGP_WSBEiJ_P0095079 Emd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097137.1 MGP_WSBEiJ_G0035818.1 mouse_genomes_project X 5255322 5255431 + Gm25885 rRNA rRNA MGP_WSBEiJ_T0016034.1 MGP_WSBEiJ_G0014164.1 mouse_genomes_project X 97603624 97604218 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094554.1 MGP_WSBEiJ_G0034790.1 mouse_genomes_project X 39734416 39736304 + MGP_WSBEiJ_P0094554 Prr32 protein_coding protein_coding MGP_WSBEiJ_T0011035.1 MGP_WSBEiJ_G0009192.1 mouse_genomes_project X 147245013 147245121 + Mir98 miRNA miRNA MGP_WSBEiJ_T0098671.1 MGP_WSBEiJ_G0037334.1 mouse_genomes_project X 53241932 53242039 - Gm25851 snRNA snRNA MGP_WSBEiJ_T0093973.1 MGP_WSBEiJ_G0034608.1 mouse_genomes_project X 790539 794850 - MGP_WSBEiJ_P0093973 Nudt10 protein_coding protein_coding MGP_WSBEiJ_T0015735.1 MGP_WSBEiJ_G0013865.1 mouse_genomes_project X 31740519 31742520 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016063.1 MGP_WSBEiJ_G0014193.1 mouse_genomes_project X 100698272 100698510 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095843.1 MGP_WSBEiJ_G0035149.1 mouse_genomes_project X 117368056 117370891 - MGP_WSBEiJ_P0095843 Nap1l3 protein_coding protein_coding MGP_WSBEiJ_T0015699.1 MGP_WSBEiJ_G0013829.1 mouse_genomes_project X 11352037 11360667 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096594.1 MGP_WSBEiJ_G0035354.1 mouse_genomes_project X 160542524 160543591 - MGP_WSBEiJ_P0096594 Gm17604 protein_coding protein_coding MGP_WSBEiJ_T0011563.1 MGP_WSBEiJ_G0009720.1 mouse_genomes_project X 98518736 98518804 - Gm27733 misc_RNA misc_RNA MGP_WSBEiJ_T0016041.1 MGP_WSBEiJ_G0014171.1 mouse_genomes_project X 98281647 98282166 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095979.1 MGP_WSBEiJ_G0035190.1 mouse_genomes_project X 130923581 130928803 + MGP_WSBEiJ_P0095979 Bhlhb9 protein_coding protein_coding MGP_WSBEiJ_T0095980.1 MGP_WSBEiJ_G0035190.1 mouse_genomes_project X 130923583 130928806 + MGP_WSBEiJ_P0095980 Bhlhb9 protein_coding protein_coding MGP_WSBEiJ_T0095981.1 MGP_WSBEiJ_G0035190.1 mouse_genomes_project X 130923583 130927051 + MGP_WSBEiJ_P0095981 Bhlhb9 protein_coding protein_coding MGP_WSBEiJ_T0095982.1 MGP_WSBEiJ_G0035190.1 mouse_genomes_project X 130923713 130925195 + Bhlhb9 protein_coding retained_intron MGP_WSBEiJ_T0096352.1 MGP_WSBEiJ_G0035289.1 mouse_genomes_project X 147965368 148129576 - MGP_WSBEiJ_P0096352 Shroom2 protein_coding protein_coding MGP_WSBEiJ_T0096353.1 MGP_WSBEiJ_G0035289.1 mouse_genomes_project X 147965851 147999642 - Shroom2 protein_coding processed_transcript MGP_WSBEiJ_T0096354.1 MGP_WSBEiJ_G0035289.1 mouse_genomes_project X 147965851 148129580 - MGP_WSBEiJ_P0096354 Shroom2 protein_coding protein_coding MGP_WSBEiJ_T0096355.1 MGP_WSBEiJ_G0035289.1 mouse_genomes_project X 147968384 148028281 - Shroom2 protein_coding processed_transcript MGP_WSBEiJ_T0096356.1 MGP_WSBEiJ_G0035289.1 mouse_genomes_project X 147975742 147999023 - Shroom2 protein_coding processed_transcript MGP_WSBEiJ_T0096357.1 MGP_WSBEiJ_G0035289.1 mouse_genomes_project X 147975951 147999209 - Shroom2 protein_coding processed_transcript MGP_WSBEiJ_T0016345.1 MGP_WSBEiJ_G0014475.1 mouse_genomes_project X 162407762 162408209 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011561.1 MGP_WSBEiJ_G0009718.1 mouse_genomes_project X 82678778 82679062 - Gm24812 misc_RNA misc_RNA MGP_WSBEiJ_T0015959.1 MGP_WSBEiJ_G0014089.1 mouse_genomes_project X 84588165 84591877 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016221.1 MGP_WSBEiJ_G0014351.1 mouse_genomes_project X 136895965 136896265 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009245.1 MGP_WSBEiJ_G0007432.1 mouse_genomes_project X 89726831 89732040 + Gm26617 lincRNA lincRNA MGP_WSBEiJ_T0095058.1 MGP_WSBEiJ_G0034936.1 mouse_genomes_project X 69064468 69095426 + MGP_WSBEiJ_P0095058 Tktl1 protein_coding protein_coding MGP_WSBEiJ_T0095059.1 MGP_WSBEiJ_G0034936.1 mouse_genomes_project X 69064499 69083247 + MGP_WSBEiJ_P0095059 Tktl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096503.1 MGP_WSBEiJ_G0035331.1 mouse_genomes_project X 157314319 157391462 - MGP_WSBEiJ_P0096503 Nhs protein_coding unknown_likely_coding MGP_WSBEiJ_T0096504.1 MGP_WSBEiJ_G0035331.1 mouse_genomes_project X 157314325 157650778 - MGP_WSBEiJ_P0096504 Nhs protein_coding protein_coding MGP_WSBEiJ_T0096505.1 MGP_WSBEiJ_G0035331.1 mouse_genomes_project X 157317850 157650436 - MGP_WSBEiJ_P0096505 Nhs protein_coding protein_coding MGP_WSBEiJ_T0095393.1 MGP_WSBEiJ_G0035019.1 mouse_genomes_project X 89960491 89964514 - MGP_WSBEiJ_P0095393 Spin4 protein_coding protein_coding MGP_WSBEiJ_T0015748.1 MGP_WSBEiJ_G0013878.1 mouse_genomes_project X 34816582 34817033 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095619.1 MGP_WSBEiJ_G0035072.1 mouse_genomes_project X 97055496 97063718 + MGP_WSBEiJ_P0095619 Pin4 protein_coding protein_coding MGP_WSBEiJ_T0095620.1 MGP_WSBEiJ_G0035072.1 mouse_genomes_project X 97055618 97063715 + Pin4 protein_coding processed_transcript MGP_WSBEiJ_T0016270.1 MGP_WSBEiJ_G0014400.1 mouse_genomes_project X 146339167 146339826 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094172.1 MGP_WSBEiJ_G0034652.1 mouse_genomes_project X 2912998 2914637 + MGP_WSBEiJ_P0094172 Slc38a5 protein_coding protein_coding MGP_WSBEiJ_T0094173.1 MGP_WSBEiJ_G0034652.1 mouse_genomes_project X 2913016 2921882 + MGP_WSBEiJ_P0094173 Slc38a5 protein_coding protein_coding MGP_WSBEiJ_T0094174.1 MGP_WSBEiJ_G0034652.1 mouse_genomes_project X 2913244 2921882 + MGP_WSBEiJ_P0094174 Slc38a5 protein_coding protein_coding MGP_WSBEiJ_T0094175.1 MGP_WSBEiJ_G0034652.1 mouse_genomes_project X 2913448 2921877 + MGP_WSBEiJ_P0094175 Slc38a5 protein_coding protein_coding MGP_WSBEiJ_T0095750.1 MGP_WSBEiJ_G0035115.1 mouse_genomes_project X 102550798 102557361 - MGP_WSBEiJ_P0095750 Itm2a protein_coding protein_coding MGP_WSBEiJ_T0094415.1 MGP_WSBEiJ_G0034739.1 mouse_genomes_project X 31517567 31560088 - MGP_WSBEiJ_P0094415 C330007P06Rik protein_coding protein_coding MGP_WSBEiJ_T0094416.1 MGP_WSBEiJ_G0034739.1 mouse_genomes_project X 31534160 31552602 - C330007P06Rik protein_coding retained_intron MGP_WSBEiJ_T0094417.1 MGP_WSBEiJ_G0034739.1 mouse_genomes_project X 31543222 31560096 - MGP_WSBEiJ_P0094417 C330007P06Rik protein_coding protein_coding MGP_WSBEiJ_T0094418.1 MGP_WSBEiJ_G0034739.1 mouse_genomes_project X 31543229 31570366 - MGP_WSBEiJ_P0094418 C330007P06Rik protein_coding protein_coding MGP_WSBEiJ_T0094419.1 MGP_WSBEiJ_G0034739.1 mouse_genomes_project X 31545867 31560023 - C330007P06Rik protein_coding processed_transcript MGP_WSBEiJ_T0094420.1 MGP_WSBEiJ_G0034739.1 mouse_genomes_project X 31552070 31560005 - C330007P06Rik protein_coding retained_intron MGP_WSBEiJ_T0094790.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471231 63513372 + MGP_WSBEiJ_P0094790 Fmr1 protein_coding protein_coding MGP_WSBEiJ_T0094791.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471272 63504233 + Fmr1 protein_coding retained_intron MGP_WSBEiJ_T0094792.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471272 63501946 + Fmr1 protein_coding retained_intron MGP_WSBEiJ_T0094793.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471272 63472796 + Fmr1 protein_coding processed_transcript MGP_WSBEiJ_T0094794.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471314 63513372 + MGP_WSBEiJ_P0094794 Fmr1 protein_coding protein_coding MGP_WSBEiJ_T0094795.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471492 63513372 + MGP_WSBEiJ_P0094795 Fmr1 protein_coding protein_coding MGP_WSBEiJ_T0094796.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471492 63513372 + MGP_WSBEiJ_P0094796 Fmr1 protein_coding protein_coding MGP_WSBEiJ_T0094797.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471501 63513372 + MGP_WSBEiJ_P0094797 Fmr1 protein_coding protein_coding MGP_WSBEiJ_T0094798.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63471507 63513372 + MGP_WSBEiJ_P0094798 Fmr1 protein_coding protein_coding MGP_WSBEiJ_T0094799.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63488646 63501243 + Fmr1 protein_coding retained_intron MGP_WSBEiJ_T0094800.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63492714 63493388 + Fmr1 protein_coding retained_intron MGP_WSBEiJ_T0094801.1 MGP_WSBEiJ_G0034879.1 mouse_genomes_project X 63507260 63508733 + Fmr1 protein_coding retained_intron MGP_WSBEiJ_T0097511.1 MGP_WSBEiJ_G0036174.1 mouse_genomes_project X 644419 711222 - Gm26618 sense_overlapping sense_overlapping MGP_WSBEiJ_T0016301.1 MGP_WSBEiJ_G0014431.1 mouse_genomes_project X 153091130 153091726 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096076.1 MGP_WSBEiJ_G0035231.1 mouse_genomes_project X 134952468 134963028 + MGP_WSBEiJ_P0096076 Cldn2 protein_coding protein_coding MGP_WSBEiJ_T0096077.1 MGP_WSBEiJ_G0035231.1 mouse_genomes_project X 134954425 134960354 + MGP_WSBEiJ_P0096077 Cldn2 protein_coding protein_coding MGP_WSBEiJ_T0096078.1 MGP_WSBEiJ_G0035231.1 mouse_genomes_project X 134957719 134960742 + MGP_WSBEiJ_P0096078 Cldn2 protein_coding protein_coding MGP_WSBEiJ_T0010974.1 MGP_WSBEiJ_G0009131.1 mouse_genomes_project X 61669208 61669283 - Mir463 miRNA miRNA MGP_WSBEiJ_T0016326.1 MGP_WSBEiJ_G0014456.1 mouse_genomes_project X 158273685 158332753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016200.1 MGP_WSBEiJ_G0014330.1 mouse_genomes_project X 132267596 132268356 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016067.1 MGP_WSBEiJ_G0014197.1 mouse_genomes_project X 101415067 101418252 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015891.1 MGP_WSBEiJ_G0014021.1 mouse_genomes_project X 69412082 69412553 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094775.1 MGP_WSBEiJ_G0034869.1 mouse_genomes_project X 57154072 57162652 + MGP_WSBEiJ_P0094775 4933402E13Rik protein_coding protein_coding MGP_WSBEiJ_T0094776.1 MGP_WSBEiJ_G0034869.1 mouse_genomes_project X 57157715 57162652 + MGP_WSBEiJ_P0094776 4933402E13Rik protein_coding protein_coding MGP_WSBEiJ_T0096539.1 MGP_WSBEiJ_G0035338.1 mouse_genomes_project X 159024865 159063502 - MGP_WSBEiJ_P0096539 Grpr protein_coding protein_coding MGP_WSBEiJ_T0095914.1 MGP_WSBEiJ_G0035173.1 mouse_genomes_project X 129566495 129569971 + MGP_WSBEiJ_P0095914 Rpl36a protein_coding protein_coding MGP_WSBEiJ_T0095915.1 MGP_WSBEiJ_G0035173.1 mouse_genomes_project X 129566530 129569977 + Rpl36a protein_coding retained_intron MGP_WSBEiJ_T0095916.1 MGP_WSBEiJ_G0035173.1 mouse_genomes_project X 129566531 129569977 + MGP_WSBEiJ_P0095916 Rpl36a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095917.1 MGP_WSBEiJ_G0035173.1 mouse_genomes_project X 129566542 129569948 + Rpl36a protein_coding retained_intron MGP_WSBEiJ_T0095918.1 MGP_WSBEiJ_G0035173.1 mouse_genomes_project X 129566558 129568797 + MGP_WSBEiJ_P0095918 Rpl36a protein_coding unknown_likely_coding MGP_WSBEiJ_T0095919.1 MGP_WSBEiJ_G0035173.1 mouse_genomes_project X 129566931 129567858 + Rpl36a protein_coding retained_intron MGP_WSBEiJ_T0095920.1 MGP_WSBEiJ_G0035173.1 mouse_genomes_project X 129567922 129569911 + Rpl36a protein_coding retained_intron MGP_WSBEiJ_T0101169.1 MGP_WSBEiJ_G0039626.1 mouse_genomes_project X 149596433 149596916 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0095659.1 MGP_WSBEiJ_G0035089.1 mouse_genomes_project X 98697811 98698896 + MGP_WSBEiJ_P0095659 Zcchc13 protein_coding protein_coding MGP_WSBEiJ_T0095357.1 MGP_WSBEiJ_G0035011.1 mouse_genomes_project X 88865051 88871844 + MGP_WSBEiJ_P0095357 AU015836 protein_coding protein_coding MGP_WSBEiJ_T0095358.1 MGP_WSBEiJ_G0035011.1 mouse_genomes_project X 88865066 88871844 + MGP_WSBEiJ_P0095358 AU015836 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095359.1 MGP_WSBEiJ_G0035011.1 mouse_genomes_project X 88865074 88866045 + MGP_WSBEiJ_P0095359 AU015836 protein_coding protein_coding MGP_WSBEiJ_T0095360.1 MGP_WSBEiJ_G0035011.1 mouse_genomes_project X 88866028 88868046 + AU015836 protein_coding processed_transcript MGP_WSBEiJ_T0095361.1 MGP_WSBEiJ_G0035011.1 mouse_genomes_project X 88866182 88871445 + MGP_WSBEiJ_P0095361 AU015836 protein_coding protein_coding MGP_WSBEiJ_T0016269.1 MGP_WSBEiJ_G0014399.1 mouse_genomes_project X 146254903 146256443 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096148.1 MGP_WSBEiJ_G0035255.1 mouse_genomes_project X 138308599 138313347 + MGP_WSBEiJ_P0096148 Rgag1 protein_coding protein_coding MGP_WSBEiJ_T0095838.1 MGP_WSBEiJ_G0035148.1 mouse_genomes_project X 115331483 115331831 - MGP_WSBEiJ_P0095838 Gm14920 protein_coding protein_coding MGP_WSBEiJ_T0015861.1 MGP_WSBEiJ_G0013991.1 mouse_genomes_project X 61823341 61823862 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095884.1 MGP_WSBEiJ_G0035163.1 mouse_genomes_project X 129114322 129127210 - MGP_WSBEiJ_P0095884 Xkrx protein_coding protein_coding MGP_WSBEiJ_T0095885.1 MGP_WSBEiJ_G0035163.1 mouse_genomes_project X 129116383 129127358 - Xkrx protein_coding processed_transcript MGP_WSBEiJ_T0095527.1 MGP_WSBEiJ_G0035054.1 mouse_genomes_project X 95972442 95978631 - Slc7a3 protein_coding retained_intron MGP_WSBEiJ_T0095528.1 MGP_WSBEiJ_G0035054.1 mouse_genomes_project X 95972451 95978578 - MGP_WSBEiJ_P0095528 Slc7a3 protein_coding protein_coding MGP_WSBEiJ_T0095529.1 MGP_WSBEiJ_G0035054.1 mouse_genomes_project X 95972452 95980936 - MGP_WSBEiJ_P0095529 Slc7a3 protein_coding protein_coding MGP_WSBEiJ_T0095530.1 MGP_WSBEiJ_G0035054.1 mouse_genomes_project X 95972452 95978598 - MGP_WSBEiJ_P0095530 Slc7a3 protein_coding protein_coding MGP_WSBEiJ_T0095531.1 MGP_WSBEiJ_G0035054.1 mouse_genomes_project X 95973036 95977405 - Slc7a3 protein_coding processed_transcript MGP_WSBEiJ_T0095532.1 MGP_WSBEiJ_G0035054.1 mouse_genomes_project X 95974801 95975467 - Slc7a3 protein_coding retained_intron MGP_WSBEiJ_T0095533.1 MGP_WSBEiJ_G0035054.1 mouse_genomes_project X 95974991 95975693 - Slc7a3 protein_coding retained_intron MGP_WSBEiJ_T0015738.1 MGP_WSBEiJ_G0013868.1 mouse_genomes_project X 33615211 33616769 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010925.1 MGP_WSBEiJ_G0009082.1 mouse_genomes_project X 1828601 1828693 - Mir500 miRNA miRNA MGP_WSBEiJ_T0016250.1 MGP_WSBEiJ_G0014380.1 mouse_genomes_project X 140461697 140462393 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095196.1 MGP_WSBEiJ_G0034956.1 mouse_genomes_project X 69911810 70008706 - MGP_WSBEiJ_P0095196 Gab3 protein_coding protein_coding MGP_WSBEiJ_T0095197.1 MGP_WSBEiJ_G0034956.1 mouse_genomes_project X 69911812 70010372 - Gab3 protein_coding processed_transcript MGP_WSBEiJ_T0095198.1 MGP_WSBEiJ_G0034956.1 mouse_genomes_project X 69911826 70008688 - MGP_WSBEiJ_P0095198 Gab3 protein_coding protein_coding MGP_WSBEiJ_T0096665.1 MGP_WSBEiJ_G0035373.1 mouse_genomes_project X 165422234 165482996 + protein_coding processed_transcript MGP_WSBEiJ_T0096666.1 MGP_WSBEiJ_G0035373.1 mouse_genomes_project X 165476016 165503361 + protein_coding processed_transcript MGP_WSBEiJ_T0096667.1 MGP_WSBEiJ_G0035373.1 mouse_genomes_project X 165476016 165503361 + protein_coding processed_transcript MGP_WSBEiJ_T0096668.1 MGP_WSBEiJ_G0035373.1 mouse_genomes_project X 165482995 165503361 + protein_coding processed_transcript MGP_WSBEiJ_T0096669.1 MGP_WSBEiJ_G0035373.1 mouse_genomes_project X 165482995 165503361 + protein_coding processed_transcript MGP_WSBEiJ_T0096670.1 MGP_WSBEiJ_G0035373.1 mouse_genomes_project X 165482995 165503361 + protein_coding processed_transcript MGP_WSBEiJ_T0094876.1 MGP_WSBEiJ_G0034903.1 mouse_genomes_project X 67765679 67768833 - MGP_WSBEiJ_P0094876 Cetn2 protein_coding protein_coding MGP_WSBEiJ_T0094877.1 MGP_WSBEiJ_G0034903.1 mouse_genomes_project X 67766179 67770292 - MGP_WSBEiJ_P0094877 Cetn2 protein_coding protein_coding MGP_WSBEiJ_T0094878.1 MGP_WSBEiJ_G0034903.1 mouse_genomes_project X 67766883 67770260 - MGP_WSBEiJ_P0094878 Cetn2 protein_coding protein_coding MGP_WSBEiJ_T0011556.1 MGP_WSBEiJ_G0009713.1 mouse_genomes_project X 47999020 47999327 + Gm23718 misc_RNA misc_RNA MGP_WSBEiJ_T0002440.1 MGP_WSBEiJ_G0002356.1 mouse_genomes_project X 161309290 161310150 - TEC TEC MGP_WSBEiJ_T0005534.1 MGP_WSBEiJ_G0004658.1 mouse_genomes_project X 153199747 153233210 - Gm15169 antisense antisense MGP_WSBEiJ_T0005535.1 MGP_WSBEiJ_G0004658.1 mouse_genomes_project X 153221231 153233204 - Gm15169 antisense antisense MGP_WSBEiJ_T0095315.1 MGP_WSBEiJ_G0034992.1 mouse_genomes_project X 80269032 80309014 + MGP_WSBEiJ_P0095315 protein_coding protein_coding MGP_WSBEiJ_T0095316.1 MGP_WSBEiJ_G0034992.1 mouse_genomes_project X 80269037 80270624 + protein_coding processed_transcript MGP_WSBEiJ_T0095317.1 MGP_WSBEiJ_G0034992.1 mouse_genomes_project X 80269050 80329225 + MGP_WSBEiJ_P0095317 protein_coding unknown_likely_coding MGP_WSBEiJ_T0095318.1 MGP_WSBEiJ_G0034992.1 mouse_genomes_project X 80269148 80308804 + MGP_WSBEiJ_P0095318 protein_coding protein_coding MGP_WSBEiJ_T0095814.1 MGP_WSBEiJ_G0035138.1 mouse_genomes_project X 108391791 108968946 + MGP_WSBEiJ_P0095814 Dach2 protein_coding protein_coding MGP_WSBEiJ_T0095815.1 MGP_WSBEiJ_G0035138.1 mouse_genomes_project X 108391803 108963596 + MGP_WSBEiJ_P0095815 Dach2 protein_coding protein_coding MGP_WSBEiJ_T0095816.1 MGP_WSBEiJ_G0035138.1 mouse_genomes_project X 108391857 108968138 + MGP_WSBEiJ_P0095816 Dach2 protein_coding protein_coding MGP_WSBEiJ_T0095817.1 MGP_WSBEiJ_G0035138.1 mouse_genomes_project X 108392533 108881002 + Dach2 protein_coding retained_intron MGP_WSBEiJ_T0095818.1 MGP_WSBEiJ_G0035138.1 mouse_genomes_project X 108392538 108965945 + MGP_WSBEiJ_P0095818 Dach2 protein_coding protein_coding MGP_WSBEiJ_T0095819.1 MGP_WSBEiJ_G0035138.1 mouse_genomes_project X 108392538 108968453 + MGP_WSBEiJ_P0095819 Dach2 protein_coding protein_coding MGP_WSBEiJ_T0095820.1 MGP_WSBEiJ_G0035138.1 mouse_genomes_project X 108392915 108654950 + Dach2 protein_coding processed_transcript MGP_WSBEiJ_T0095821.1 MGP_WSBEiJ_G0035138.1 mouse_genomes_project X 108850534 108965945 + Dach2 protein_coding processed_transcript MGP_WSBEiJ_T0016011.1 MGP_WSBEiJ_G0014141.1 mouse_genomes_project X 92890574 92892459 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096003.1 MGP_WSBEiJ_G0035204.1 mouse_genomes_project X 131805747 131809244 + MGP_WSBEiJ_P0096003 Tceal1 protein_coding protein_coding MGP_WSBEiJ_T0009270.1 MGP_WSBEiJ_G0007444.1 mouse_genomes_project X 112546986 112547355 + Gm28579 lincRNA lincRNA MGP_WSBEiJ_T0094871.1 MGP_WSBEiJ_G0034901.1 mouse_genomes_project X 67295520 67504206 - MGP_WSBEiJ_P0094871 Gabra3 protein_coding protein_coding MGP_WSBEiJ_T0094872.1 MGP_WSBEiJ_G0034901.1 mouse_genomes_project X 67297414 67505099 - MGP_WSBEiJ_P0094872 Gabra3 protein_coding protein_coding MGP_WSBEiJ_T0094873.1 MGP_WSBEiJ_G0034901.1 mouse_genomes_project X 67368800 67504263 - Gabra3 protein_coding processed_transcript MGP_WSBEiJ_T0094683.1 MGP_WSBEiJ_G0034834.1 mouse_genomes_project X 48350139 48389197 - MGP_WSBEiJ_P0094683 protein_coding protein_coding MGP_WSBEiJ_T0094606.1 MGP_WSBEiJ_G0034804.1 mouse_genomes_project X 43327110 43334733 + Slc25a14 protein_coding processed_transcript MGP_WSBEiJ_T0094607.1 MGP_WSBEiJ_G0034804.1 mouse_genomes_project X 43327275 43367047 + MGP_WSBEiJ_P0094607 Slc25a14 protein_coding protein_coding MGP_WSBEiJ_T0094608.1 MGP_WSBEiJ_G0034804.1 mouse_genomes_project X 43327275 43367047 + MGP_WSBEiJ_P0094608 Slc25a14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094609.1 MGP_WSBEiJ_G0034804.1 mouse_genomes_project X 43327275 43367047 + MGP_WSBEiJ_P0094609 Slc25a14 protein_coding protein_coding MGP_WSBEiJ_T0094610.1 MGP_WSBEiJ_G0034804.1 mouse_genomes_project X 43327446 43356116 + Slc25a14 protein_coding processed_transcript MGP_WSBEiJ_T0094611.1 MGP_WSBEiJ_G0034804.1 mouse_genomes_project X 43327462 43367047 + MGP_WSBEiJ_P0094611 Slc25a14 protein_coding protein_coding MGP_WSBEiJ_T0094612.1 MGP_WSBEiJ_G0034804.1 mouse_genomes_project X 43327517 43338915 + Slc25a14 protein_coding retained_intron MGP_WSBEiJ_T0094613.1 MGP_WSBEiJ_G0034804.1 mouse_genomes_project X 43327659 43367045 + MGP_WSBEiJ_P0094613 Slc25a14 protein_coding protein_coding MGP_WSBEiJ_T0016297.1 MGP_WSBEiJ_G0014427.1 mouse_genomes_project X 152978932 152979629 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005504.1 MGP_WSBEiJ_G0004635.1 mouse_genomes_project X 51214906 51221487 - antisense antisense MGP_WSBEiJ_T0096189.1 MGP_WSBEiJ_G0035263.1 mouse_genomes_project X 140486682 140547446 - MGP_WSBEiJ_P0096189 Lhfpl1 protein_coding protein_coding MGP_WSBEiJ_T0096190.1 MGP_WSBEiJ_G0035263.1 mouse_genomes_project X 140539492 140547585 - MGP_WSBEiJ_P0096190 Lhfpl1 protein_coding protein_coding MGP_WSBEiJ_T0096102.1 MGP_WSBEiJ_G0035236.1 mouse_genomes_project X 135542172 135569228 + MGP_WSBEiJ_P0096102 Frmpd3 protein_coding protein_coding MGP_WSBEiJ_T0096103.1 MGP_WSBEiJ_G0035236.1 mouse_genomes_project X 135557301 135569873 + MGP_WSBEiJ_P0096103 Frmpd3 protein_coding protein_coding MGP_WSBEiJ_T0010946.1 MGP_WSBEiJ_G0009103.1 mouse_genomes_project X 45836164 45836243 - Gm25241 miRNA miRNA MGP_WSBEiJ_T0101165.1 MGP_WSBEiJ_G0039622.1 mouse_genomes_project X 140538305 140539518 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016168.1 MGP_WSBEiJ_G0014298.1 mouse_genomes_project X 127152065 127152967 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016169.1 MGP_WSBEiJ_G0014299.1 mouse_genomes_project X 127169636 127170579 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095960.1 MGP_WSBEiJ_G0035184.1 mouse_genomes_project X 130641303 130655975 - MGP_WSBEiJ_P0095960 Prame protein_coding protein_coding MGP_WSBEiJ_T0095961.1 MGP_WSBEiJ_G0035184.1 mouse_genomes_project X 130641445 130644107 - MGP_WSBEiJ_P0095961 Prame protein_coding protein_coding MGP_WSBEiJ_T0094684.1 MGP_WSBEiJ_G0034835.1 mouse_genomes_project X 48350156 48389130 - MGP_WSBEiJ_P0094684 protein_coding protein_coding MGP_WSBEiJ_T0015850.1 MGP_WSBEiJ_G0013980.1 mouse_genomes_project X 59661590 59662448 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096618.1 MGP_WSBEiJ_G0035360.1 mouse_genomes_project X 161903842 161927640 - MGP_WSBEiJ_P0096618 Rab9 protein_coding protein_coding MGP_WSBEiJ_T0016281.1 MGP_WSBEiJ_G0014411.1 mouse_genomes_project X 148883105 148883490 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095779.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106475675 106552412 - MGP_WSBEiJ_P0095779 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095780.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106475675 106552564 - MGP_WSBEiJ_P0095780 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095781.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106475676 106572680 - MGP_WSBEiJ_P0095781 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095782.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106475676 106552564 - MGP_WSBEiJ_P0095782 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095783.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106477263 106552474 - MGP_WSBEiJ_P0095783 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095784.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106524247 106572659 - MGP_WSBEiJ_P0095784 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095785.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106524279 106553024 - MGP_WSBEiJ_P0095785 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095786.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106525185 106621449 - MGP_WSBEiJ_P0095786 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095787.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106529100 106552008 - MGP_WSBEiJ_P0095787 Rps6ka6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095788.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106529177 106628282 - MGP_WSBEiJ_P0095788 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095789.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106535709 106628294 - MGP_WSBEiJ_P0095789 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0095790.1 MGP_WSBEiJ_G0035128.1 mouse_genomes_project X 106539802 106626677 - MGP_WSBEiJ_P0095790 Rps6ka6 protein_coding protein_coding MGP_WSBEiJ_T0009222.1 MGP_WSBEiJ_G0007414.1 mouse_genomes_project X 16065951 16070333 - Gm26593 lincRNA lincRNA MGP_WSBEiJ_T0095948.1 MGP_WSBEiJ_G0035181.1 mouse_genomes_project X 129954149 129975279 - MGP_WSBEiJ_P0095948 Nxf2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0095949.1 MGP_WSBEiJ_G0035181.1 mouse_genomes_project X 129954152 129967503 - Nxf2 protein_coding retained_intron MGP_WSBEiJ_T0095950.1 MGP_WSBEiJ_G0035181.1 mouse_genomes_project X 129954154 129976173 - MGP_WSBEiJ_P0095950 Nxf2 protein_coding protein_coding MGP_WSBEiJ_T0095951.1 MGP_WSBEiJ_G0035181.1 mouse_genomes_project X 129954154 129976173 - MGP_WSBEiJ_P0095951 Nxf2 protein_coding protein_coding MGP_WSBEiJ_T0095654.1 MGP_WSBEiJ_G0035084.1 mouse_genomes_project X 98228313 98230778 - MGP_WSBEiJ_P0095654 Nap1l2 protein_coding protein_coding MGP_WSBEiJ_T0096565.1 MGP_WSBEiJ_G0035347.1 mouse_genomes_project X 159809043 159905116 + MGP_WSBEiJ_P0096565 Pir protein_coding protein_coding MGP_WSBEiJ_T0096566.1 MGP_WSBEiJ_G0035347.1 mouse_genomes_project X 159809103 159909011 + MGP_WSBEiJ_P0096566 Pir protein_coding protein_coding MGP_WSBEiJ_T0096567.1 MGP_WSBEiJ_G0035347.1 mouse_genomes_project X 159809183 159812344 + Pir protein_coding retained_intron MGP_WSBEiJ_T0096568.1 MGP_WSBEiJ_G0035347.1 mouse_genomes_project X 159809219 159886516 + Pir protein_coding retained_intron MGP_WSBEiJ_T0096569.1 MGP_WSBEiJ_G0035347.1 mouse_genomes_project X 159809245 159851643 + Pir protein_coding processed_transcript MGP_WSBEiJ_T0094700.1 MGP_WSBEiJ_G0034845.1 mouse_genomes_project X 51403526 51411515 - MGP_WSBEiJ_P0094700 Gm648 protein_coding protein_coding MGP_WSBEiJ_T0095091.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69180502 69181506 + Taz protein_coding processed_transcript MGP_WSBEiJ_T0095092.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69180502 69181456 + Taz protein_coding processed_transcript MGP_WSBEiJ_T0095093.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69180510 69188945 + MGP_WSBEiJ_P0095093 Taz protein_coding unknown_likely_coding MGP_WSBEiJ_T0095094.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181287 69188742 + MGP_WSBEiJ_P0095094 Taz protein_coding protein_coding MGP_WSBEiJ_T0095095.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181340 69184478 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095096.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181340 69186626 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095097.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181340 69188739 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095098.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181340 69188739 + MGP_WSBEiJ_P0095098 Taz protein_coding protein_coding MGP_WSBEiJ_T0095099.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181350 69186870 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095100.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181350 69187295 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095101.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181352 69188739 + MGP_WSBEiJ_P0095101 Taz protein_coding protein_coding MGP_WSBEiJ_T0095102.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181356 69182560 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095103.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181362 69187749 + MGP_WSBEiJ_P0095103 Taz protein_coding protein_coding MGP_WSBEiJ_T0095104.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181379 69182905 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095105.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181511 69187435 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095106.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181598 69187991 + MGP_WSBEiJ_P0095106 Taz protein_coding protein_coding MGP_WSBEiJ_T0095107.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69181672 69188076 + MGP_WSBEiJ_P0095107 Taz protein_coding protein_coding MGP_WSBEiJ_T0095108.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69182527 69187939 + MGP_WSBEiJ_P0095108 Taz protein_coding protein_coding MGP_WSBEiJ_T0095109.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69186255 69187200 + Taz protein_coding retained_intron MGP_WSBEiJ_T0095110.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69186610 69188325 + MGP_WSBEiJ_P0095110 Taz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095111.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69186662 69188479 + MGP_WSBEiJ_P0095111 Taz protein_coding protein_coding MGP_WSBEiJ_T0095112.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69187252 69188322 + MGP_WSBEiJ_P0095112 Taz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095113.1 MGP_WSBEiJ_G0034941.1 mouse_genomes_project X 69187263 69188272 + Taz protein_coding retained_intron MGP_WSBEiJ_T0094788.1 MGP_WSBEiJ_G0034877.1 mouse_genomes_project X 62723592 62725179 - MGP_WSBEiJ_P0094788 4933436I01Rik protein_coding protein_coding MGP_WSBEiJ_T0096002.1 MGP_WSBEiJ_G0035203.1 mouse_genomes_project X 131680334 131740583 + protein_coding processed_transcript MGP_WSBEiJ_T0094874.1 MGP_WSBEiJ_G0034902.1 mouse_genomes_project X 67682050 67699459 + MGP_WSBEiJ_P0094874 Gabrq protein_coding protein_coding MGP_WSBEiJ_T0094875.1 MGP_WSBEiJ_G0034902.1 mouse_genomes_project X 67682308 67695417 + MGP_WSBEiJ_P0094875 Gabrq protein_coding protein_coding MGP_WSBEiJ_T0015940.1 MGP_WSBEiJ_G0014070.1 mouse_genomes_project X 81060678 81063602 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010989.1 MGP_WSBEiJ_G0009146.1 mouse_genomes_project X 67446033 67446140 - Mir767 miRNA miRNA MGP_WSBEiJ_T0096601.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161685641 161838733 + MGP_WSBEiJ_P0096601 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096602.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161685702 161838733 + MGP_WSBEiJ_P0096602 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096603.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161685702 161838733 + MGP_WSBEiJ_P0096603 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096604.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161793958 161838733 + MGP_WSBEiJ_P0096604 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096605.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161793958 161838733 + MGP_WSBEiJ_P0096605 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096606.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161793958 161838733 + MGP_WSBEiJ_P0096606 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096607.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161793958 161833746 + MGP_WSBEiJ_P0096607 Gpm6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096608.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161793958 161838733 + MGP_WSBEiJ_P0096608 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096609.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161793958 161838733 + MGP_WSBEiJ_P0096609 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096610.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161793958 161838733 + MGP_WSBEiJ_P0096610 Gpm6b protein_coding protein_coding MGP_WSBEiJ_T0096611.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161793958 161833746 + MGP_WSBEiJ_P0096611 Gpm6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096612.1 MGP_WSBEiJ_G0035357.1 mouse_genomes_project X 161794108 161823037 + Gpm6b protein_coding retained_intron MGP_WSBEiJ_T0015766.1 MGP_WSBEiJ_G0013896.1 mouse_genomes_project X 39127059 39127454 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094144.1 MGP_WSBEiJ_G0034647.1 mouse_genomes_project X 2770555 2772789 - Rbm3 protein_coding processed_transcript MGP_WSBEiJ_T0094145.1 MGP_WSBEiJ_G0034647.1 mouse_genomes_project X 2770558 2778373 - MGP_WSBEiJ_P0094145 Rbm3 protein_coding protein_coding MGP_WSBEiJ_T0094146.1 MGP_WSBEiJ_G0034647.1 mouse_genomes_project X 2772364 2778355 - MGP_WSBEiJ_P0094146 Rbm3 protein_coding protein_coding MGP_WSBEiJ_T0094147.1 MGP_WSBEiJ_G0034647.1 mouse_genomes_project X 2775799 2778373 - MGP_WSBEiJ_P0094147 Rbm3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094148.1 MGP_WSBEiJ_G0034647.1 mouse_genomes_project X 2776022 2778398 - Rbm3 protein_coding retained_intron MGP_WSBEiJ_T0094149.1 MGP_WSBEiJ_G0034647.1 mouse_genomes_project X 2777149 2778435 - Rbm3 protein_coding retained_intron MGP_WSBEiJ_T0016078.1 MGP_WSBEiJ_G0014208.1 mouse_genomes_project X 102498943 102499970 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015963.1 MGP_WSBEiJ_G0014093.1 mouse_genomes_project X 85512238 85512755 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016047.1 MGP_WSBEiJ_G0014177.1 mouse_genomes_project X 98548177 98548578 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011010.1 MGP_WSBEiJ_G0009167.1 mouse_genomes_project X 100468214 100468302 - Mir384 miRNA miRNA MGP_WSBEiJ_T0098653.1 MGP_WSBEiJ_G0037316.1 mouse_genomes_project X 14061164 14061271 + Gm22783 snRNA snRNA MGP_WSBEiJ_T0016298.1 MGP_WSBEiJ_G0014428.1 mouse_genomes_project X 153046693 153046828 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094614.1 MGP_WSBEiJ_G0034805.1 mouse_genomes_project X 43372705 43379157 - MGP_WSBEiJ_P0094614 Gpr119 protein_coding protein_coding MGP_WSBEiJ_T0016185.1 MGP_WSBEiJ_G0014315.1 mouse_genomes_project X 130250798 130251544 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094686.1 MGP_WSBEiJ_G0034837.1 mouse_genomes_project X 48458366 48472012 + MGP_WSBEiJ_P0094686 4930502E18Rik protein_coding protein_coding MGP_WSBEiJ_T0015739.1 MGP_WSBEiJ_G0013869.1 mouse_genomes_project X 33811433 33812380 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010976.1 MGP_WSBEiJ_G0009133.1 mouse_genomes_project X 61671493 61671571 - Mir878 miRNA miRNA MGP_WSBEiJ_T0094728.1 MGP_WSBEiJ_G0034853.1 mouse_genomes_project X 51968244 51991297 + MGP_WSBEiJ_P0094728 Vgll1 protein_coding protein_coding MGP_WSBEiJ_T0094729.1 MGP_WSBEiJ_G0034853.1 mouse_genomes_project X 51969450 51990286 + MGP_WSBEiJ_P0094729 Vgll1 protein_coding protein_coding MGP_WSBEiJ_T0094730.1 MGP_WSBEiJ_G0034853.1 mouse_genomes_project X 51969512 51991297 + MGP_WSBEiJ_P0094730 Vgll1 protein_coding protein_coding MGP_WSBEiJ_T0094731.1 MGP_WSBEiJ_G0034853.1 mouse_genomes_project X 51981058 51985692 + MGP_WSBEiJ_P0094731 Vgll1 protein_coding protein_coding MGP_WSBEiJ_T0094619.1 MGP_WSBEiJ_G0034808.1 mouse_genomes_project X 43695887 43880653 - MGP_WSBEiJ_P0094619 Enox2 protein_coding protein_coding MGP_WSBEiJ_T0094620.1 MGP_WSBEiJ_G0034808.1 mouse_genomes_project X 43749115 43980575 - Enox2 protein_coding processed_transcript MGP_WSBEiJ_T0094621.1 MGP_WSBEiJ_G0034808.1 mouse_genomes_project X 43752330 43980528 - Enox2 protein_coding processed_transcript MGP_WSBEiJ_T0094622.1 MGP_WSBEiJ_G0034808.1 mouse_genomes_project X 43756632 43980558 - Enox2 protein_coding processed_transcript MGP_WSBEiJ_T0094774.1 MGP_WSBEiJ_G0034868.1 mouse_genomes_project X 56586580 56588039 + MGP_WSBEiJ_P0094774 Ldoc1 protein_coding protein_coding MGP_WSBEiJ_T0094452.1 MGP_WSBEiJ_G0034757.1 mouse_genomes_project X 32162845 32164173 + MGP_WSBEiJ_P0094452 protein_coding protein_coding MGP_WSBEiJ_T0094772.1 MGP_WSBEiJ_G0034866.1 mouse_genomes_project X 55781477 55783541 - MGP_WSBEiJ_P0094772 Sox3 protein_coding protein_coding MGP_WSBEiJ_T0016264.1 MGP_WSBEiJ_G0014394.1 mouse_genomes_project X 145687358 145687562 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018036.1 MGP_WSBEiJ_G0015202.1 mouse_genomes_project X 96195297 96220780 + Gm21986 processed_transcript processed_transcript MGP_WSBEiJ_T0095268.1 MGP_WSBEiJ_G0034976.1 mouse_genomes_project X 72740994 72748407 + MGP_WSBEiJ_P0095268 protein_coding protein_coding MGP_WSBEiJ_T0096582.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160472917 160518771 - MGP_WSBEiJ_P0096582 Mospd2 protein_coding protein_coding MGP_WSBEiJ_T0096583.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160473116 160518693 - MGP_WSBEiJ_P0096583 Mospd2 protein_coding protein_coding MGP_WSBEiJ_T0096584.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160475018 160518731 - MGP_WSBEiJ_P0096584 Mospd2 protein_coding protein_coding MGP_WSBEiJ_T0096585.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160492977 160518724 - Mospd2 protein_coding retained_intron MGP_WSBEiJ_T0096586.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160492995 160518724 - Mospd2 protein_coding retained_intron MGP_WSBEiJ_T0096587.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160498062 160518721 - Mospd2 protein_coding retained_intron MGP_WSBEiJ_T0096588.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160501831 160518723 - Mospd2 protein_coding retained_intron MGP_WSBEiJ_T0096589.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160502157 160518739 - Mospd2 protein_coding processed_transcript MGP_WSBEiJ_T0096590.1 MGP_WSBEiJ_G0035352.1 mouse_genomes_project X 160518056 160518718 - Mospd2 protein_coding retained_intron MGP_WSBEiJ_T0016076.1 MGP_WSBEiJ_G0014206.1 mouse_genomes_project X 102389261 102389732 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016052.1 MGP_WSBEiJ_G0014182.1 mouse_genomes_project X 98756861 98757180 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010970.1 MGP_WSBEiJ_G0009127.1 mouse_genomes_project X 61651660 61651736 - Mir883a miRNA miRNA MGP_WSBEiJ_T0095963.1 MGP_WSBEiJ_G0035186.1 mouse_genomes_project X 130745552 130753099 - MGP_WSBEiJ_P0095963 protein_coding protein_coding MGP_WSBEiJ_T0095964.1 MGP_WSBEiJ_G0035186.1 mouse_genomes_project X 130745552 130747555 - MGP_WSBEiJ_P0095964 protein_coding protein_coding MGP_WSBEiJ_T0101154.1 MGP_WSBEiJ_G0039611.1 mouse_genomes_project X 86444287 86445206 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0095351.1 MGP_WSBEiJ_G0035009.1 mouse_genomes_project X 88538577 88637408 + MGP_WSBEiJ_P0095351 Pcyt1b protein_coding protein_coding MGP_WSBEiJ_T0095352.1 MGP_WSBEiJ_G0035009.1 mouse_genomes_project X 88564972 88637408 + MGP_WSBEiJ_P0095352 Pcyt1b protein_coding protein_coding MGP_WSBEiJ_T0095353.1 MGP_WSBEiJ_G0035009.1 mouse_genomes_project X 88619011 88622305 + Pcyt1b protein_coding processed_transcript MGP_WSBEiJ_T0095443.1 MGP_WSBEiJ_G0035032.1 mouse_genomes_project X 91982406 91991894 + MGP_WSBEiJ_P0095443 Pgr15l protein_coding protein_coding MGP_WSBEiJ_T0098667.1 MGP_WSBEiJ_G0037330.1 mouse_genomes_project X 43001563 43001664 + Gm22612 snRNA snRNA MGP_WSBEiJ_T0010959.1 MGP_WSBEiJ_G0009116.1 mouse_genomes_project X 47735350 47735448 - Mir351 miRNA miRNA MGP_WSBEiJ_T0015664.1 MGP_WSBEiJ_G0013794.1 mouse_genomes_project X 2670302 2670731 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094507.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36442880 36462624 - MGP_WSBEiJ_P0094507 protein_coding protein_coding MGP_WSBEiJ_T0094508.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36442880 36565656 - MGP_WSBEiJ_P0094508 protein_coding protein_coding MGP_WSBEiJ_T0094509.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36444997 36462998 - MGP_WSBEiJ_P0094509 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094510.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36445371 36454443 - MGP_WSBEiJ_P0094510 protein_coding protein_coding MGP_WSBEiJ_T0094511.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36450219 36454931 - MGP_WSBEiJ_P0094511 protein_coding protein_coding MGP_WSBEiJ_T0094512.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36450231 36454595 - MGP_WSBEiJ_P0094512 protein_coding protein_coding MGP_WSBEiJ_T0094513.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36451404 36462093 - protein_coding processed_transcript MGP_WSBEiJ_T0094514.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36459987 36462700 - protein_coding retained_intron MGP_WSBEiJ_T0094515.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36462575 36509970 - protein_coding processed_transcript MGP_WSBEiJ_T0094516.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36462971 36479314 - protein_coding retained_intron MGP_WSBEiJ_T0094517.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36471712 36479422 - protein_coding retained_intron MGP_WSBEiJ_T0094518.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36506360 36565656 - protein_coding retained_intron MGP_WSBEiJ_T0094519.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36511140 36565641 - MGP_WSBEiJ_P0094519 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094520.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36525993 36575401 - MGP_WSBEiJ_P0094520 protein_coding protein_coding MGP_WSBEiJ_T0094521.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36525997 36546658 - MGP_WSBEiJ_P0094521 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094522.1 MGP_WSBEiJ_G0034781.1 mouse_genomes_project X 36531964 36548112 - protein_coding retained_intron MGP_WSBEiJ_T0016229.1 MGP_WSBEiJ_G0014359.1 mouse_genomes_project X 137275746 137276106 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099899.1 MGP_WSBEiJ_G0038562.1 mouse_genomes_project X 1818530 1818606 + Gm26401 snoRNA snoRNA MGP_WSBEiJ_T0095557.1 MGP_WSBEiJ_G0035061.1 mouse_genomes_project X 96198607 96225030 + MGP_WSBEiJ_P0095557 Nlgn3 protein_coding protein_coding MGP_WSBEiJ_T0095558.1 MGP_WSBEiJ_G0035061.1 mouse_genomes_project X 96198624 96218115 + MGP_WSBEiJ_P0095558 Nlgn3 protein_coding protein_coding MGP_WSBEiJ_T0095559.1 MGP_WSBEiJ_G0035061.1 mouse_genomes_project X 96198643 96225381 + MGP_WSBEiJ_P0095559 Nlgn3 protein_coding protein_coding MGP_WSBEiJ_T0095560.1 MGP_WSBEiJ_G0035061.1 mouse_genomes_project X 96199924 96201515 + Nlgn3 protein_coding processed_transcript MGP_WSBEiJ_T0095561.1 MGP_WSBEiJ_G0035061.1 mouse_genomes_project X 96213840 96217591 + Nlgn3 protein_coding processed_transcript MGP_WSBEiJ_T0016022.1 MGP_WSBEiJ_G0014152.1 mouse_genomes_project X 95476881 95477281 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016309.1 MGP_WSBEiJ_G0014439.1 mouse_genomes_project X 154502598 154503401 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095674.1 MGP_WSBEiJ_G0035097.1 mouse_genomes_project X 100192418 100197849 + MGP_WSBEiJ_P0095674 Pbdc1 protein_coding protein_coding MGP_WSBEiJ_T0095675.1 MGP_WSBEiJ_G0035097.1 mouse_genomes_project X 100192423 100231007 + MGP_WSBEiJ_P0095675 Pbdc1 protein_coding protein_coding MGP_WSBEiJ_T0095676.1 MGP_WSBEiJ_G0035097.1 mouse_genomes_project X 100192437 100195823 + Pbdc1 protein_coding retained_intron MGP_WSBEiJ_T0010994.1 MGP_WSBEiJ_G0009151.1 mouse_genomes_project X 69172641 69172720 - Mir7091 miRNA miRNA MGP_WSBEiJ_T0011003.1 MGP_WSBEiJ_G0009160.1 mouse_genomes_project X 96938738 96938842 - Gm27843 miRNA miRNA MGP_WSBEiJ_T0100171.1 MGP_WSBEiJ_G0038744.1 mouse_genomes_project X 9892898 9893780 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100172.1 MGP_WSBEiJ_G0038744.1 mouse_genomes_project X 9893145 9893694 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0015962.1 MGP_WSBEiJ_G0014092.1 mouse_genomes_project X 85201876 85204282 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009213.1 MGP_WSBEiJ_G0007408.1 mouse_genomes_project X 8053006 8054647 - 2010308F09Rik lincRNA lincRNA MGP_WSBEiJ_T0009214.1 MGP_WSBEiJ_G0007408.1 mouse_genomes_project X 8053049 8067321 - 2010308F09Rik lincRNA lincRNA MGP_WSBEiJ_T0098714.1 MGP_WSBEiJ_G0037377.1 mouse_genomes_project X 150119218 150119326 + Gm22359 snRNA snRNA MGP_WSBEiJ_T0009269.1 MGP_WSBEiJ_G0007443.1 mouse_genomes_project X 110018145 110019758 + 4930555B12Rik lincRNA lincRNA MGP_WSBEiJ_T0098678.1 MGP_WSBEiJ_G0037341.1 mouse_genomes_project X 70504022 70504186 - Gm25421 snRNA snRNA MGP_WSBEiJ_T0094095.1 MGP_WSBEiJ_G0034634.1 mouse_genomes_project X 2503115 2513434 + MGP_WSBEiJ_P0094095 Slc35a2 protein_coding protein_coding MGP_WSBEiJ_T0094096.1 MGP_WSBEiJ_G0034634.1 mouse_genomes_project X 2503318 2513406 + MGP_WSBEiJ_P0094096 Slc35a2 protein_coding protein_coding MGP_WSBEiJ_T0094097.1 MGP_WSBEiJ_G0034634.1 mouse_genomes_project X 2503396 2512969 + MGP_WSBEiJ_P0094097 Slc35a2 protein_coding protein_coding MGP_WSBEiJ_T0094098.1 MGP_WSBEiJ_G0034634.1 mouse_genomes_project X 2503451 2513404 + MGP_WSBEiJ_P0094098 Slc35a2 protein_coding protein_coding MGP_WSBEiJ_T0094099.1 MGP_WSBEiJ_G0034634.1 mouse_genomes_project X 2504909 2513402 + MGP_WSBEiJ_P0094099 Slc35a2 protein_coding protein_coding MGP_WSBEiJ_T0094100.1 MGP_WSBEiJ_G0034634.1 mouse_genomes_project X 2511956 2513406 + Slc35a2 protein_coding processed_transcript MGP_WSBEiJ_T0095426.1 MGP_WSBEiJ_G0035027.1 mouse_genomes_project X 91196720 91236924 - MGP_WSBEiJ_P0095426 Vsig4 protein_coding protein_coding MGP_WSBEiJ_T0095427.1 MGP_WSBEiJ_G0035027.1 mouse_genomes_project X 91199467 91236898 - Vsig4 protein_coding processed_transcript MGP_WSBEiJ_T0010958.1 MGP_WSBEiJ_G0009115.1 mouse_genomes_project X 47731054 47731139 - Mir542 miRNA miRNA MGP_WSBEiJ_T0016209.1 MGP_WSBEiJ_G0014339.1 mouse_genomes_project X 134862040 134862829 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015901.1 MGP_WSBEiJ_G0014031.1 mouse_genomes_project X 71619527 71620242 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016243.1 MGP_WSBEiJ_G0014373.1 mouse_genomes_project X 139488633 139491163 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016276.1 MGP_WSBEiJ_G0014406.1 mouse_genomes_project X 147908070 147908978 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096671.1 MGP_WSBEiJ_G0035374.1 mouse_genomes_project X 165485458 165485767 - MGP_WSBEiJ_P0096671 protein_coding protein_coding MGP_WSBEiJ_T0009248.1 MGP_WSBEiJ_G0007435.1 mouse_genomes_project X 94300305 94312520 - Gm14809 lincRNA lincRNA MGP_WSBEiJ_T0015724.1 MGP_WSBEiJ_G0013854.1 mouse_genomes_project X 17140930 17141414 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096096.1 MGP_WSBEiJ_G0035234.1 mouse_genomes_project X 135174041 135218295 - MGP_WSBEiJ_P0096096 Nup62cl protein_coding protein_coding MGP_WSBEiJ_T0096097.1 MGP_WSBEiJ_G0035234.1 mouse_genomes_project X 135188307 135228883 - MGP_WSBEiJ_P0096097 Nup62cl protein_coding protein_coding MGP_WSBEiJ_T0096098.1 MGP_WSBEiJ_G0035234.1 mouse_genomes_project X 135193845 135229302 - MGP_WSBEiJ_P0096098 Nup62cl protein_coding protein_coding MGP_WSBEiJ_T0096099.1 MGP_WSBEiJ_G0035234.1 mouse_genomes_project X 135194445 135229170 - MGP_WSBEiJ_P0096099 Nup62cl protein_coding protein_coding MGP_WSBEiJ_T0096100.1 MGP_WSBEiJ_G0035234.1 mouse_genomes_project X 135201365 135229141 - MGP_WSBEiJ_P0096100 Nup62cl protein_coding protein_coding MGP_WSBEiJ_T0096221.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145846058 145914252 - MGP_WSBEiJ_P0096221 Apex2 protein_coding protein_coding MGP_WSBEiJ_T0096222.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145846891 145912489 - MGP_WSBEiJ_P0096222 Apex2 protein_coding protein_coding MGP_WSBEiJ_T0096227.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145893164 145914252 - MGP_WSBEiJ_P0096227 Apex2 protein_coding protein_coding MGP_WSBEiJ_T0096228.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145895809 145912492 - Apex2 protein_coding retained_intron MGP_WSBEiJ_T0096229.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145895810 145914276 - Apex2 protein_coding processed_transcript MGP_WSBEiJ_T0096230.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145895810 145912503 - MGP_WSBEiJ_P0096230 Apex2 protein_coding protein_coding MGP_WSBEiJ_T0096231.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145895810 145912556 - MGP_WSBEiJ_P0096231 Apex2 protein_coding protein_coding MGP_WSBEiJ_T0096232.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145896761 145910593 - Apex2 protein_coding processed_transcript MGP_WSBEiJ_T0096233.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145896851 145912478 - MGP_WSBEiJ_P0096233 Apex2 protein_coding protein_coding MGP_WSBEiJ_T0096234.1 MGP_WSBEiJ_G0035269.1 mouse_genomes_project X 145908522 145912488 - MGP_WSBEiJ_P0096234 Apex2 protein_coding protein_coding MGP_WSBEiJ_T0096555.1 MGP_WSBEiJ_G0035343.1 mouse_genomes_project X 159600899 159605698 - MGP_WSBEiJ_P0096555 protein_coding protein_coding MGP_WSBEiJ_T0096556.1 MGP_WSBEiJ_G0035343.1 mouse_genomes_project X 159601513 159606070 - MGP_WSBEiJ_P0096556 protein_coding protein_coding MGP_WSBEiJ_T0096367.1 MGP_WSBEiJ_G0035295.1 mouse_genomes_project X 148608241 148751021 + MGP_WSBEiJ_P0096367 Klf8 protein_coding protein_coding MGP_WSBEiJ_T0096368.1 MGP_WSBEiJ_G0035295.1 mouse_genomes_project X 148608522 148776162 + MGP_WSBEiJ_P0096368 Klf8 protein_coding protein_coding MGP_WSBEiJ_T0096369.1 MGP_WSBEiJ_G0035295.1 mouse_genomes_project X 148737849 148775827 + MGP_WSBEiJ_P0096369 Klf8 protein_coding protein_coding MGP_WSBEiJ_T0095598.1 MGP_WSBEiJ_G0035067.1 mouse_genomes_project X 96558983 96601309 + MGP_WSBEiJ_P0095598 Ogt protein_coding protein_coding MGP_WSBEiJ_T0095599.1 MGP_WSBEiJ_G0035067.1 mouse_genomes_project X 96558985 96571661 + Ogt protein_coding retained_intron MGP_WSBEiJ_T0095600.1 MGP_WSBEiJ_G0035067.1 mouse_genomes_project X 96558987 96602720 + MGP_WSBEiJ_P0095600 Ogt protein_coding protein_coding MGP_WSBEiJ_T0095601.1 MGP_WSBEiJ_G0035067.1 mouse_genomes_project X 96559017 96573099 + Ogt protein_coding processed_transcript MGP_WSBEiJ_T0095602.1 MGP_WSBEiJ_G0035067.1 mouse_genomes_project X 96559031 96573367 + Ogt protein_coding retained_intron MGP_WSBEiJ_T0095603.1 MGP_WSBEiJ_G0035067.1 mouse_genomes_project X 96559063 96571675 + Ogt protein_coding retained_intron MGP_WSBEiJ_T0095604.1 MGP_WSBEiJ_G0035067.1 mouse_genomes_project X 96574125 96601527 + Ogt protein_coding processed_transcript MGP_WSBEiJ_T0094465.1 MGP_WSBEiJ_G0034768.1 mouse_genomes_project X 32739192 32745244 + MGP_WSBEiJ_P0094465 Rhox10 protein_coding protein_coding MGP_WSBEiJ_T0096572.1 MGP_WSBEiJ_G0035349.1 mouse_genomes_project X 159959140 159973260 + MGP_WSBEiJ_P0096572 Piga protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096573.1 MGP_WSBEiJ_G0035349.1 mouse_genomes_project X 159959140 159973255 + MGP_WSBEiJ_P0096573 Piga protein_coding protein_coding MGP_WSBEiJ_T0096574.1 MGP_WSBEiJ_G0035349.1 mouse_genomes_project X 159959165 159973253 + MGP_WSBEiJ_P0096574 Piga protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096575.1 MGP_WSBEiJ_G0035349.1 mouse_genomes_project X 159959256 159973257 + MGP_WSBEiJ_P0096575 Piga protein_coding protein_coding MGP_WSBEiJ_T0096576.1 MGP_WSBEiJ_G0035349.1 mouse_genomes_project X 159961933 159971322 + MGP_WSBEiJ_P0096576 Piga protein_coding protein_coding MGP_WSBEiJ_T0096577.1 MGP_WSBEiJ_G0035349.1 mouse_genomes_project X 159964863 159971409 + Piga protein_coding retained_intron MGP_WSBEiJ_T0094091.1 MGP_WSBEiJ_G0034633.1 mouse_genomes_project X 2497344 2499399 + Pim2 protein_coding retained_intron MGP_WSBEiJ_T0094092.1 MGP_WSBEiJ_G0034633.1 mouse_genomes_project X 2497384 2502509 + MGP_WSBEiJ_P0094092 Pim2 protein_coding protein_coding MGP_WSBEiJ_T0094093.1 MGP_WSBEiJ_G0034633.1 mouse_genomes_project X 2497388 2502505 + MGP_WSBEiJ_P0094093 Pim2 protein_coding protein_coding MGP_WSBEiJ_T0094094.1 MGP_WSBEiJ_G0034633.1 mouse_genomes_project X 2497700 2500479 + Pim2 protein_coding processed_transcript MGP_WSBEiJ_T0094427.1 MGP_WSBEiJ_G0034741.1 mouse_genomes_project X 31588146 31603496 - MGP_WSBEiJ_P0094427 Nkrf protein_coding protein_coding MGP_WSBEiJ_T0016148.1 MGP_WSBEiJ_G0014278.1 mouse_genomes_project X 117429206 117429509 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016255.1 MGP_WSBEiJ_G0014385.1 mouse_genomes_project X 141172327 141173162 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094786.1 MGP_WSBEiJ_G0034876.1 mouse_genomes_project X 61520658 61532730 + MGP_WSBEiJ_P0094786 Slitrk2 protein_coding protein_coding MGP_WSBEiJ_T0094787.1 MGP_WSBEiJ_G0034876.1 mouse_genomes_project X 61524353 61527836 + MGP_WSBEiJ_P0094787 Slitrk2 protein_coding protein_coding MGP_WSBEiJ_T0015780.1 MGP_WSBEiJ_G0013910.1 mouse_genomes_project X 42997448 42997796 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009243.1 MGP_WSBEiJ_G0007430.1 mouse_genomes_project X 85942144 85942768 + Gm14773 lincRNA lincRNA MGP_WSBEiJ_T0095710.1 MGP_WSBEiJ_G0035102.1 mouse_genomes_project X 101136730 101143432 + MGP_WSBEiJ_P0095710 Cox7b protein_coding protein_coding MGP_WSBEiJ_T0095711.1 MGP_WSBEiJ_G0035102.1 mouse_genomes_project X 101136746 101137160 + Cox7b protein_coding processed_transcript MGP_WSBEiJ_T0095712.1 MGP_WSBEiJ_G0035102.1 mouse_genomes_project X 101140372 101142940 + Cox7b protein_coding retained_intron MGP_WSBEiJ_T0015898.1 MGP_WSBEiJ_G0014028.1 mouse_genomes_project X 70838262 70839574 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015904.1 MGP_WSBEiJ_G0014034.1 mouse_genomes_project X 71927137 71927576 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101152.1 MGP_WSBEiJ_G0039609.1 mouse_genomes_project X 84080791 84081845 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016101.1 MGP_WSBEiJ_G0014231.1 mouse_genomes_project X 107914960 107915435 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094555.1 MGP_WSBEiJ_G0034791.1 mouse_genomes_project X 41002967 41004306 + MGP_WSBEiJ_P0094555 Actrt1 protein_coding protein_coding MGP_WSBEiJ_T0094213.1 MGP_WSBEiJ_G0034677.1 mouse_genomes_project X 4814052 4964054 - MGP_WSBEiJ_P0094213 Rpgr protein_coding protein_coding MGP_WSBEiJ_T0094214.1 MGP_WSBEiJ_G0034677.1 mouse_genomes_project X 4901154 4964054 - MGP_WSBEiJ_P0094214 Rpgr protein_coding protein_coding MGP_WSBEiJ_T0094215.1 MGP_WSBEiJ_G0034677.1 mouse_genomes_project X 4901612 4963827 - MGP_WSBEiJ_P0094215 Rpgr protein_coding protein_coding MGP_WSBEiJ_T0094216.1 MGP_WSBEiJ_G0034677.1 mouse_genomes_project X 4904442 4964054 - MGP_WSBEiJ_P0094216 Rpgr protein_coding protein_coding MGP_WSBEiJ_T0094217.1 MGP_WSBEiJ_G0034677.1 mouse_genomes_project X 4925163 4963892 - Rpgr protein_coding retained_intron MGP_WSBEiJ_T0094218.1 MGP_WSBEiJ_G0034677.1 mouse_genomes_project X 4954198 4963867 - Rpgr protein_coding retained_intron MGP_WSBEiJ_T0094219.1 MGP_WSBEiJ_G0034677.1 mouse_genomes_project X 4960696 4963616 - Rpgr protein_coding processed_transcript MGP_WSBEiJ_T0098681.1 MGP_WSBEiJ_G0037344.1 mouse_genomes_project X 82976707 82976814 + Gm25006 snRNA snRNA MGP_WSBEiJ_T0096402.1 MGP_WSBEiJ_G0035308.1 mouse_genomes_project X 152586661 152848227 - MGP_WSBEiJ_P0096402 Phex protein_coding protein_coding MGP_WSBEiJ_T0096403.1 MGP_WSBEiJ_G0035308.1 mouse_genomes_project X 152657293 152848783 - MGP_WSBEiJ_P0096403 Phex protein_coding protein_coding MGP_WSBEiJ_T0009211.1 MGP_WSBEiJ_G0007407.1 mouse_genomes_project X 7133290 7149677 - Gm14635 lincRNA lincRNA MGP_WSBEiJ_T0009212.1 MGP_WSBEiJ_G0007407.1 mouse_genomes_project X 7134145 7138729 - Gm14635 lincRNA lincRNA MGP_WSBEiJ_T0096363.1 MGP_WSBEiJ_G0035293.1 mouse_genomes_project X 148486994 148501053 + MGP_WSBEiJ_P0096363 Foxr2 protein_coding protein_coding MGP_WSBEiJ_T0096364.1 MGP_WSBEiJ_G0035293.1 mouse_genomes_project X 148495090 148501053 + MGP_WSBEiJ_P0096364 Foxr2 protein_coding protein_coding MGP_WSBEiJ_T0095734.1 MGP_WSBEiJ_G0035112.1 mouse_genomes_project X 102241802 102258204 + MGP_WSBEiJ_P0095734 P2ry10 protein_coding protein_coding MGP_WSBEiJ_T0095735.1 MGP_WSBEiJ_G0035112.1 mouse_genomes_project X 102242544 102258208 + MGP_WSBEiJ_P0095735 P2ry10 protein_coding protein_coding MGP_WSBEiJ_T0095736.1 MGP_WSBEiJ_G0035112.1 mouse_genomes_project X 102242588 102258208 + MGP_WSBEiJ_P0095736 P2ry10 protein_coding protein_coding MGP_WSBEiJ_T0016234.1 MGP_WSBEiJ_G0014364.1 mouse_genomes_project X 137733062 137733494 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096149.1 MGP_WSBEiJ_G0035256.1 mouse_genomes_project X 138484284 138596671 - MGP_WSBEiJ_P0096149 Chrdl1 protein_coding protein_coding MGP_WSBEiJ_T0096150.1 MGP_WSBEiJ_G0035256.1 mouse_genomes_project X 138484294 138600830 - MGP_WSBEiJ_P0096150 Chrdl1 protein_coding protein_coding MGP_WSBEiJ_T0096151.1 MGP_WSBEiJ_G0035256.1 mouse_genomes_project X 138495775 138600752 - MGP_WSBEiJ_P0096151 Chrdl1 protein_coding protein_coding MGP_WSBEiJ_T0096152.1 MGP_WSBEiJ_G0035256.1 mouse_genomes_project X 138495777 138600464 - MGP_WSBEiJ_P0096152 Chrdl1 protein_coding protein_coding MGP_WSBEiJ_T0094676.1 MGP_WSBEiJ_G0034830.1 mouse_genomes_project X 47962380 47994326 + MGP_WSBEiJ_P0094676 Fam122c protein_coding protein_coding MGP_WSBEiJ_T0094677.1 MGP_WSBEiJ_G0034830.1 mouse_genomes_project X 47962380 48023998 + MGP_WSBEiJ_P0094677 Fam122c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094678.1 MGP_WSBEiJ_G0034830.1 mouse_genomes_project X 47962389 48023998 + MGP_WSBEiJ_P0094678 Fam122c protein_coding protein_coding MGP_WSBEiJ_T0016139.1 MGP_WSBEiJ_G0014269.1 mouse_genomes_project X 115458949 115459601 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015870.1 MGP_WSBEiJ_G0014000.1 mouse_genomes_project X 63575691 63575919 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016311.1 MGP_WSBEiJ_G0014441.1 mouse_genomes_project X 154819633 154819897 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094026.1 MGP_WSBEiJ_G0034623.1 mouse_genomes_project X 2269814 2274389 - MGP_WSBEiJ_P0094026 Plp2 protein_coding protein_coding MGP_WSBEiJ_T0095339.1 MGP_WSBEiJ_G0035003.1 mouse_genomes_project X 85942086 85942768 + MGP_WSBEiJ_P0095339 protein_coding protein_coding MGP_WSBEiJ_T0095114.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69195615 69204648 + MGP_WSBEiJ_P0095114 Atp6ap1 protein_coding protein_coding MGP_WSBEiJ_T0095115.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69195661 69202301 + MGP_WSBEiJ_P0095115 Atp6ap1 protein_coding protein_coding MGP_WSBEiJ_T0095116.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69195680 69203357 + MGP_WSBEiJ_P0095116 Atp6ap1 protein_coding protein_coding MGP_WSBEiJ_T0095117.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69195681 69204616 + MGP_WSBEiJ_P0095117 Atp6ap1 protein_coding protein_coding MGP_WSBEiJ_T0095118.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69195695 69201285 + Atp6ap1 protein_coding retained_intron MGP_WSBEiJ_T0095119.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69195751 69203390 + MGP_WSBEiJ_P0095119 Atp6ap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095120.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69195780 69202441 + MGP_WSBEiJ_P0095120 Atp6ap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095121.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69201850 69203160 + Atp6ap1 protein_coding processed_transcript MGP_WSBEiJ_T0095122.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69202479 69203940 + Atp6ap1 protein_coding retained_intron MGP_WSBEiJ_T0095123.1 MGP_WSBEiJ_G0034942.1 mouse_genomes_project X 69203415 69203942 + MGP_WSBEiJ_P0095123 Atp6ap1 protein_coding protein_coding MGP_WSBEiJ_T0015805.1 MGP_WSBEiJ_G0013935.1 mouse_genomes_project X 50650842 50651612 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094778.1 MGP_WSBEiJ_G0034871.1 mouse_genomes_project X 59051781 59052564 - MGP_WSBEiJ_P0094778 Gm6760 protein_coding protein_coding MGP_WSBEiJ_T0094598.1 MGP_WSBEiJ_G0034802.1 mouse_genomes_project X 43222536 43233517 + MGP_WSBEiJ_P0094598 Rab33a protein_coding protein_coding MGP_WSBEiJ_T0095258.1 MGP_WSBEiJ_G0034970.1 mouse_genomes_project X 71227090 71230363 + MGP_WSBEiJ_P0095258 protein_coding protein_coding MGP_WSBEiJ_T0015675.1 MGP_WSBEiJ_G0013805.1 mouse_genomes_project X 5966866 5967505 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095862.1 MGP_WSBEiJ_G0035158.1 mouse_genomes_project X 128849208 128856591 - MGP_WSBEiJ_P0095862 Tspan6 protein_coding protein_coding MGP_WSBEiJ_T0095863.1 MGP_WSBEiJ_G0035158.1 mouse_genomes_project X 128850879 128856456 - MGP_WSBEiJ_P0095863 Tspan6 protein_coding protein_coding MGP_WSBEiJ_T0095864.1 MGP_WSBEiJ_G0035158.1 mouse_genomes_project X 128852700 128856456 - MGP_WSBEiJ_P0095864 Tspan6 protein_coding protein_coding MGP_WSBEiJ_T0095865.1 MGP_WSBEiJ_G0035158.1 mouse_genomes_project X 128854900 128856275 - Tspan6 protein_coding processed_transcript MGP_WSBEiJ_T0094892.1 MGP_WSBEiJ_G0034911.1 mouse_genomes_project X 68263892 68281368 + MGP_WSBEiJ_P0094892 Zfp92 protein_coding protein_coding MGP_WSBEiJ_T0094893.1 MGP_WSBEiJ_G0034911.1 mouse_genomes_project X 68264356 68282756 + MGP_WSBEiJ_P0094893 Zfp92 protein_coding protein_coding MGP_WSBEiJ_T0011002.1 MGP_WSBEiJ_G0009159.1 mouse_genomes_project X 95265457 95265546 + Mir676 miRNA miRNA MGP_WSBEiJ_T0098659.1 MGP_WSBEiJ_G0037322.1 mouse_genomes_project X 31045105 31045209 + Gm25047 snRNA snRNA MGP_WSBEiJ_T0015916.1 MGP_WSBEiJ_G0014046.1 mouse_genomes_project X 73681448 73684322 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010950.1 MGP_WSBEiJ_G0009107.1 mouse_genomes_project X 47394905 47394996 - Mir92-2 miRNA miRNA MGP_WSBEiJ_T0095997.1 MGP_WSBEiJ_G0035200.1 mouse_genomes_project X 131335360 131336018 + MGP_WSBEiJ_P0095997 Ngfrap1 protein_coding protein_coding MGP_WSBEiJ_T0101141.1 MGP_WSBEiJ_G0039598.1 mouse_genomes_project X 69667860 69670403 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097141.1 MGP_WSBEiJ_G0035822.1 mouse_genomes_project X 44527559 44527647 + n-R5s6 rRNA rRNA MGP_WSBEiJ_T0095825.1 MGP_WSBEiJ_G0035140.1 mouse_genomes_project X 109994441 109996077 + MGP_WSBEiJ_P0095825 Ube2dnl1 protein_coding protein_coding MGP_WSBEiJ_T0016219.1 MGP_WSBEiJ_G0014349.1 mouse_genomes_project X 136649844 136651099 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011037.1 MGP_WSBEiJ_G0009194.1 mouse_genomes_project X 162430581 162430709 + Gm44376 miRNA miRNA MGP_WSBEiJ_T0094930.1 MGP_WSBEiJ_G0034921.1 mouse_genomes_project X 68627331 68642755 + MGP_WSBEiJ_P0094930 Plxnb3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094931.1 MGP_WSBEiJ_G0034921.1 mouse_genomes_project X 68627749 68643018 + Plxnb3 protein_coding retained_intron MGP_WSBEiJ_T0094932.1 MGP_WSBEiJ_G0034921.1 mouse_genomes_project X 68627749 68643018 + Plxnb3 protein_coding retained_intron MGP_WSBEiJ_T0094933.1 MGP_WSBEiJ_G0034921.1 mouse_genomes_project X 68627749 68643018 + Plxnb3 protein_coding retained_intron MGP_WSBEiJ_T0094934.1 MGP_WSBEiJ_G0034921.1 mouse_genomes_project X 68636035 68640169 + Plxnb3 protein_coding retained_intron MGP_WSBEiJ_T0015774.1 MGP_WSBEiJ_G0013904.1 mouse_genomes_project X 42057798 42058700 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005516.1 MGP_WSBEiJ_G0004646.1 mouse_genomes_project X 80447241 80452534 + Gm14764 antisense antisense MGP_WSBEiJ_T0095669.1 MGP_WSBEiJ_G0035093.1 mouse_genomes_project X 99377232 99522346 - MGP_WSBEiJ_P0095669 Abcb7 protein_coding protein_coding MGP_WSBEiJ_T0095670.1 MGP_WSBEiJ_G0035093.1 mouse_genomes_project X 99445613 99522356 - Abcb7 protein_coding retained_intron MGP_WSBEiJ_T0095653.1 MGP_WSBEiJ_G0035083.1 mouse_genomes_project X 97897074 97897822 + MGP_WSBEiJ_P0095653 1700011M02Rik protein_coding protein_coding MGP_WSBEiJ_T0095056.1 MGP_WSBEiJ_G0034935.1 mouse_genomes_project X 69039150 69053860 - MGP_WSBEiJ_P0095056 Tex28 protein_coding protein_coding MGP_WSBEiJ_T0095057.1 MGP_WSBEiJ_G0034935.1 mouse_genomes_project X 69039150 69053860 - MGP_WSBEiJ_P0095057 Tex28 protein_coding protein_coding MGP_WSBEiJ_T0015987.1 MGP_WSBEiJ_G0014117.1 mouse_genomes_project X 89246863 89247564 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015821.1 MGP_WSBEiJ_G0013951.1 mouse_genomes_project X 54748371 54749428 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094367.1 MGP_WSBEiJ_G0034719.1 mouse_genomes_project X 15764449 15774839 - MGP_WSBEiJ_P0094367 Zfp300 protein_coding protein_coding MGP_WSBEiJ_T0094368.1 MGP_WSBEiJ_G0034719.1 mouse_genomes_project X 15766881 15774861 - MGP_WSBEiJ_P0094368 Zfp300 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094369.1 MGP_WSBEiJ_G0034719.1 mouse_genomes_project X 15769237 15774596 - Zfp300 protein_coding retained_intron MGP_WSBEiJ_T0094370.1 MGP_WSBEiJ_G0034719.1 mouse_genomes_project X 15769545 15775137 - Zfp300 protein_coding processed_transcript MGP_WSBEiJ_T0015966.1 MGP_WSBEiJ_G0014096.1 mouse_genomes_project X 86078197 86078572 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015866.1 MGP_WSBEiJ_G0013996.1 mouse_genomes_project X 63117833 63118199 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095476.1 MGP_WSBEiJ_G0035040.1 mouse_genomes_project X 94727322 94755025 + MGP_WSBEiJ_P0095476 Tmem28 protein_coding protein_coding MGP_WSBEiJ_T0101163.1 MGP_WSBEiJ_G0039620.1 mouse_genomes_project X 130281376 130284738 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0095444.1 MGP_WSBEiJ_G0035033.1 mouse_genomes_project X 92232659 92278994 - MGP_WSBEiJ_P0095444 Eda2r protein_coding protein_coding MGP_WSBEiJ_T0095445.1 MGP_WSBEiJ_G0035033.1 mouse_genomes_project X 92235957 92278928 - MGP_WSBEiJ_P0095445 Eda2r protein_coding protein_coding MGP_WSBEiJ_T0095446.1 MGP_WSBEiJ_G0035033.1 mouse_genomes_project X 92236610 92278994 - Eda2r protein_coding retained_intron MGP_WSBEiJ_T0095447.1 MGP_WSBEiJ_G0035033.1 mouse_genomes_project X 92239943 92278950 - Eda2r protein_coding retained_intron MGP_WSBEiJ_T0009272.1 MGP_WSBEiJ_G0007446.1 mouse_genomes_project X 124057290 124060140 + 4930558G05Rik lincRNA lincRNA MGP_WSBEiJ_T0015841.1 MGP_WSBEiJ_G0013971.1 mouse_genomes_project X 57122697 57123797 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016238.1 MGP_WSBEiJ_G0014368.1 mouse_genomes_project X 138394659 138395689 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096235.1 MGP_WSBEiJ_G0035271.1 mouse_genomes_project X 145912635 145948039 + MGP_WSBEiJ_P0096235 Pfkfb1 protein_coding protein_coding MGP_WSBEiJ_T0096236.1 MGP_WSBEiJ_G0035271.1 mouse_genomes_project X 145912662 145939618 + Pfkfb1 protein_coding processed_transcript MGP_WSBEiJ_T0096237.1 MGP_WSBEiJ_G0035271.1 mouse_genomes_project X 145914328 145964988 + MGP_WSBEiJ_P0096237 Pfkfb1 protein_coding protein_coding MGP_WSBEiJ_T0096238.1 MGP_WSBEiJ_G0035271.1 mouse_genomes_project X 145918885 145964988 + MGP_WSBEiJ_P0096238 Pfkfb1 protein_coding protein_coding MGP_WSBEiJ_T0096239.1 MGP_WSBEiJ_G0035271.1 mouse_genomes_project X 145919017 145964967 + Pfkfb1 protein_coding retained_intron MGP_WSBEiJ_T0096240.1 MGP_WSBEiJ_G0035271.1 mouse_genomes_project X 145940619 145947562 + Pfkfb1 protein_coding processed_transcript MGP_WSBEiJ_T0096241.1 MGP_WSBEiJ_G0035271.1 mouse_genomes_project X 145948196 145963087 + Pfkfb1 protein_coding processed_transcript MGP_WSBEiJ_T0015802.1 MGP_WSBEiJ_G0013932.1 mouse_genomes_project X 48507923 48508217 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095778.1 MGP_WSBEiJ_G0035127.1 mouse_genomes_project X 106255646 106256000 + MGP_WSBEiJ_P0095778 Gm10112 protein_coding protein_coding MGP_WSBEiJ_T0096394.1 MGP_WSBEiJ_G0035305.1 mouse_genomes_project X 150789057 150803642 - MGP_WSBEiJ_P0096394 Prdx4 protein_coding protein_coding MGP_WSBEiJ_T0096395.1 MGP_WSBEiJ_G0035305.1 mouse_genomes_project X 150793613 150805929 - MGP_WSBEiJ_P0096395 Prdx4 protein_coding protein_coding MGP_WSBEiJ_T0096396.1 MGP_WSBEiJ_G0035305.1 mouse_genomes_project X 150801965 150803649 - Prdx4 protein_coding processed_transcript MGP_WSBEiJ_T0096370.1 MGP_WSBEiJ_G0035296.1 mouse_genomes_project X 148872344 148875689 + MGP_WSBEiJ_P0096370 Ubqln2 protein_coding protein_coding MGP_WSBEiJ_T0095592.1 MGP_WSBEiJ_G0035066.1 mouse_genomes_project X 96446804 96519246 + MGP_WSBEiJ_P0095592 Taf1 protein_coding protein_coding MGP_WSBEiJ_T0095593.1 MGP_WSBEiJ_G0035066.1 mouse_genomes_project X 96446811 96519995 + MGP_WSBEiJ_P0095593 Taf1 protein_coding protein_coding MGP_WSBEiJ_T0095594.1 MGP_WSBEiJ_G0035066.1 mouse_genomes_project X 96446829 96519246 + MGP_WSBEiJ_P0095594 Taf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095595.1 MGP_WSBEiJ_G0035066.1 mouse_genomes_project X 96446829 96465924 + MGP_WSBEiJ_P0095595 Taf1 protein_coding protein_coding MGP_WSBEiJ_T0095596.1 MGP_WSBEiJ_G0035066.1 mouse_genomes_project X 96473018 96519246 + Taf1 protein_coding retained_intron MGP_WSBEiJ_T0095597.1 MGP_WSBEiJ_G0035066.1 mouse_genomes_project X 96508752 96518783 + Taf1 protein_coding processed_transcript MGP_WSBEiJ_T0094646.1 MGP_WSBEiJ_G0034819.1 mouse_genomes_project X 45730846 45740518 - Mbnl3 protein_coding retained_intron MGP_WSBEiJ_T0094647.1 MGP_WSBEiJ_G0034819.1 mouse_genomes_project X 45730883 45779529 - MGP_WSBEiJ_P0094647 Mbnl3 protein_coding protein_coding MGP_WSBEiJ_T0094648.1 MGP_WSBEiJ_G0034819.1 mouse_genomes_project X 45731279 45753433 - Mbnl3 protein_coding processed_transcript MGP_WSBEiJ_T0094649.1 MGP_WSBEiJ_G0034819.1 mouse_genomes_project X 45731401 45780044 - MGP_WSBEiJ_P0094649 Mbnl3 protein_coding protein_coding MGP_WSBEiJ_T0094650.1 MGP_WSBEiJ_G0034819.1 mouse_genomes_project X 45779271 45823576 - Mbnl3 protein_coding processed_transcript MGP_WSBEiJ_T0016184.1 MGP_WSBEiJ_G0014314.1 mouse_genomes_project X 129912829 129913462 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094014.1 MGP_WSBEiJ_G0034620.1 mouse_genomes_project X 2237068 2254581 + MGP_WSBEiJ_P0094014 Syp protein_coding protein_coding MGP_WSBEiJ_T0094015.1 MGP_WSBEiJ_G0034620.1 mouse_genomes_project X 2237235 2247184 + Syp protein_coding retained_intron MGP_WSBEiJ_T0094016.1 MGP_WSBEiJ_G0034620.1 mouse_genomes_project X 2237319 2244119 + MGP_WSBEiJ_P0094016 Syp protein_coding protein_coding MGP_WSBEiJ_T0094017.1 MGP_WSBEiJ_G0034620.1 mouse_genomes_project X 2237902 2244108 + Syp protein_coding processed_transcript MGP_WSBEiJ_T0094018.1 MGP_WSBEiJ_G0034620.1 mouse_genomes_project X 2238358 2244067 + Syp protein_coding retained_intron MGP_WSBEiJ_T0094019.1 MGP_WSBEiJ_G0034620.1 mouse_genomes_project X 2243733 2244852 + Syp protein_coding retained_intron MGP_WSBEiJ_T0016167.1 MGP_WSBEiJ_G0014297.1 mouse_genomes_project X 126834213 126839479 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016277.1 MGP_WSBEiJ_G0014407.1 mouse_genomes_project X 147923753 147924279 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015827.1 MGP_WSBEiJ_G0013957.1 mouse_genomes_project X 55607197 55608257 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094177.1 MGP_WSBEiJ_G0034654.1 mouse_genomes_project X 3026248 3324566 + MGP_WSBEiJ_P0094177 protein_coding protein_coding MGP_WSBEiJ_T0095249.1 MGP_WSBEiJ_G0034966.1 mouse_genomes_project X 70497263 70503450 - MGP_WSBEiJ_P0095249 Rab39b protein_coding protein_coding MGP_WSBEiJ_T0010929.1 MGP_WSBEiJ_G0009086.1 mouse_genomes_project X 1839320 1839416 - Mir532 miRNA miRNA MGP_WSBEiJ_T0094663.1 MGP_WSBEiJ_G0034825.1 mouse_genomes_project X 47453199 47461473 + MGP_WSBEiJ_P0094663 Ccdc160 protein_coding protein_coding MGP_WSBEiJ_T0005505.1 MGP_WSBEiJ_G0004636.1 mouse_genomes_project X 52094691 52098400 + Gm14718 antisense antisense MGP_WSBEiJ_T0094672.1 MGP_WSBEiJ_G0034829.1 mouse_genomes_project X 47932422 47958758 - MGP_WSBEiJ_P0094672 Fam122b protein_coding protein_coding MGP_WSBEiJ_T0094673.1 MGP_WSBEiJ_G0034829.1 mouse_genomes_project X 47932432 47957973 - MGP_WSBEiJ_P0094673 Fam122b protein_coding protein_coding MGP_WSBEiJ_T0094674.1 MGP_WSBEiJ_G0034829.1 mouse_genomes_project X 47932753 47958751 - MGP_WSBEiJ_P0094674 Fam122b protein_coding protein_coding MGP_WSBEiJ_T0094675.1 MGP_WSBEiJ_G0034829.1 mouse_genomes_project X 47933869 47958758 - Fam122b protein_coding processed_transcript MGP_WSBEiJ_T0016133.1 MGP_WSBEiJ_G0014263.1 mouse_genomes_project X 113726385 113727494 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094523.1 MGP_WSBEiJ_G0034782.1 mouse_genomes_project X 36718259 36732252 + Xiap protein_coding processed_transcript MGP_WSBEiJ_T0094524.1 MGP_WSBEiJ_G0034782.1 mouse_genomes_project X 36726427 36770371 + MGP_WSBEiJ_P0094524 Xiap protein_coding protein_coding MGP_WSBEiJ_T0094525.1 MGP_WSBEiJ_G0034782.1 mouse_genomes_project X 36726509 36765527 + Xiap protein_coding processed_transcript MGP_WSBEiJ_T0094526.1 MGP_WSBEiJ_G0034782.1 mouse_genomes_project X 36728052 36770371 + MGP_WSBEiJ_P0094526 Xiap protein_coding protein_coding MGP_WSBEiJ_T0094527.1 MGP_WSBEiJ_G0034782.1 mouse_genomes_project X 36728409 36770371 + Xiap protein_coding processed_transcript MGP_WSBEiJ_T0094528.1 MGP_WSBEiJ_G0034782.1 mouse_genomes_project X 36731004 36770371 + MGP_WSBEiJ_P0094528 Xiap protein_coding protein_coding MGP_WSBEiJ_T0094529.1 MGP_WSBEiJ_G0034782.1 mouse_genomes_project X 36753153 36770371 + MGP_WSBEiJ_P0094529 Xiap protein_coding protein_coding MGP_WSBEiJ_T0095335.1 MGP_WSBEiJ_G0034999.1 mouse_genomes_project X 84532102 84535329 + MGP_WSBEiJ_P0095335 4932429P05Rik protein_coding protein_coding MGP_WSBEiJ_T0016187.1 MGP_WSBEiJ_G0014317.1 mouse_genomes_project X 130774528 130776349 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095195.1 MGP_WSBEiJ_G0034955.1 mouse_genomes_project X 69679024 69680629 - MGP_WSBEiJ_P0095195 protein_coding protein_coding MGP_WSBEiJ_T0100177.1 MGP_WSBEiJ_G0038747.1 mouse_genomes_project X 18049540 18050098 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0015971.1 MGP_WSBEiJ_G0014101.1 mouse_genomes_project X 86366825 86367016 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011579.1 MGP_WSBEiJ_G0009736.1 mouse_genomes_project X 134801733 134802057 - Gm24380 misc_RNA misc_RNA MGP_WSBEiJ_T0096511.1 MGP_WSBEiJ_G0035333.1 mouse_genomes_project X 158253274 158271728 + MGP_WSBEiJ_P0096511 Rbbp7 protein_coding protein_coding MGP_WSBEiJ_T0096512.1 MGP_WSBEiJ_G0035333.1 mouse_genomes_project X 158253293 158271392 + MGP_WSBEiJ_P0096512 Rbbp7 protein_coding protein_coding MGP_WSBEiJ_T0096513.1 MGP_WSBEiJ_G0035333.1 mouse_genomes_project X 158253334 158268768 + MGP_WSBEiJ_P0096513 Rbbp7 protein_coding protein_coding MGP_WSBEiJ_T0096514.1 MGP_WSBEiJ_G0035333.1 mouse_genomes_project X 158253939 158265106 + MGP_WSBEiJ_P0096514 Rbbp7 protein_coding protein_coding MGP_WSBEiJ_T0096515.1 MGP_WSBEiJ_G0035333.1 mouse_genomes_project X 158267450 158271209 + MGP_WSBEiJ_P0096515 Rbbp7 protein_coding protein_coding MGP_WSBEiJ_T0096557.1 MGP_WSBEiJ_G0035344.1 mouse_genomes_project X 159618919 159649868 + MGP_WSBEiJ_P0096557 Tmem27 protein_coding protein_coding MGP_WSBEiJ_T0096558.1 MGP_WSBEiJ_G0035344.1 mouse_genomes_project X 159620276 159649867 + MGP_WSBEiJ_P0096558 Tmem27 protein_coding protein_coding MGP_WSBEiJ_T0096559.1 MGP_WSBEiJ_G0035344.1 mouse_genomes_project X 159622280 159649222 + MGP_WSBEiJ_P0096559 Tmem27 protein_coding protein_coding MGP_WSBEiJ_T0101134.1 MGP_WSBEiJ_G0039591.1 mouse_genomes_project X 32596060 32600833 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098696.1 MGP_WSBEiJ_G0037359.1 mouse_genomes_project X 110427364 110427488 - Gm25366 snRNA snRNA MGP_WSBEiJ_T0097152.1 MGP_WSBEiJ_G0035833.1 mouse_genomes_project X 147648225 147648336 + n-R5s15 rRNA rRNA MGP_WSBEiJ_T0015721.1 MGP_WSBEiJ_G0013851.1 mouse_genomes_project X 16918107 16921810 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010932.1 MGP_WSBEiJ_G0009089.1 mouse_genomes_project X 8467824 8467893 + Gm25246 miRNA miRNA MGP_WSBEiJ_T0094669.1 MGP_WSBEiJ_G0034828.1 mouse_genomes_project X 47753661 47928808 - MGP_WSBEiJ_P0094669 Plac1 protein_coding protein_coding MGP_WSBEiJ_T0094670.1 MGP_WSBEiJ_G0034828.1 mouse_genomes_project X 47753662 47799703 - MGP_WSBEiJ_P0094670 Plac1 protein_coding protein_coding MGP_WSBEiJ_T0094671.1 MGP_WSBEiJ_G0034828.1 mouse_genomes_project X 47753838 47896969 - MGP_WSBEiJ_P0094671 Plac1 protein_coding protein_coding MGP_WSBEiJ_T0016037.1 MGP_WSBEiJ_G0014167.1 mouse_genomes_project X 98053354 98053560 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015981.1 MGP_WSBEiJ_G0014111.1 mouse_genomes_project X 88877373 88880068 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015710.1 MGP_WSBEiJ_G0013840.1 mouse_genomes_project X 15013509 15013915 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101159.1 MGP_WSBEiJ_G0039616.1 mouse_genomes_project X 97657491 97734129 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0095329.1 MGP_WSBEiJ_G0034996.1 mouse_genomes_project X 80913224 80918345 + MGP_WSBEiJ_P0095329 Nr0b1 protein_coding protein_coding MGP_WSBEiJ_T0094451.1 MGP_WSBEiJ_G0034756.1 mouse_genomes_project X 32162842 32164170 + MGP_WSBEiJ_P0094451 protein_coding protein_coding MGP_WSBEiJ_T0016024.1 MGP_WSBEiJ_G0014154.1 mouse_genomes_project X 96133925 96134194 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015784.1 MGP_WSBEiJ_G0013914.1 mouse_genomes_project X 44234751 44235010 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093989.1 MGP_WSBEiJ_G0034615.1 mouse_genomes_project X 1964978 1969586 - MGP_WSBEiJ_P0093989 Usp27x protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093990.1 MGP_WSBEiJ_G0034615.1 mouse_genomes_project X 1964978 1969586 - MGP_WSBEiJ_P0093990 Usp27x protein_coding protein_coding MGP_WSBEiJ_T0093991.1 MGP_WSBEiJ_G0034615.1 mouse_genomes_project X 1966368 1969590 - MGP_WSBEiJ_P0093991 Usp27x protein_coding protein_coding MGP_WSBEiJ_T0009232.1 MGP_WSBEiJ_G0007421.1 mouse_genomes_project X 55932194 55967964 + Gm14664 lincRNA lincRNA MGP_WSBEiJ_T0095924.1 MGP_WSBEiJ_G0035176.1 mouse_genomes_project X 129686723 129696959 + MGP_WSBEiJ_P0095924 Armcx4 protein_coding protein_coding MGP_WSBEiJ_T0015778.1 MGP_WSBEiJ_G0013908.1 mouse_genomes_project X 42411786 42414401 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009216.1 MGP_WSBEiJ_G0007410.1 mouse_genomes_project X 10681826 10691037 - lincRNA lincRNA MGP_WSBEiJ_T0009217.1 MGP_WSBEiJ_G0007410.1 mouse_genomes_project X 10681826 10684500 - lincRNA lincRNA MGP_WSBEiJ_T0098697.1 MGP_WSBEiJ_G0037360.1 mouse_genomes_project X 111382242 111382406 + Gm24624 snRNA snRNA MGP_WSBEiJ_T0016342.1 MGP_WSBEiJ_G0014472.1 mouse_genomes_project X 161933361 161934187 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015992.1 MGP_WSBEiJ_G0014122.1 mouse_genomes_project X 89544376 89544702 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016142.1 MGP_WSBEiJ_G0014272.1 mouse_genomes_project X 116365692 116367279 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015667.1 MGP_WSBEiJ_G0013797.1 mouse_genomes_project X 3627711 3629208 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011015.1 MGP_WSBEiJ_G0009172.1 mouse_genomes_project X 129036716 129036798 + Mir3112 miRNA miRNA MGP_WSBEiJ_T0098674.1 MGP_WSBEiJ_G0037337.1 mouse_genomes_project X 59710335 59710441 + Gm26111 snRNA snRNA MGP_WSBEiJ_T0094404.1 MGP_WSBEiJ_G0034733.1 mouse_genomes_project X 31086474 31087669 + MGP_WSBEiJ_P0094404 protein_coding protein_coding MGP_WSBEiJ_T0010948.1 MGP_WSBEiJ_G0009105.1 mouse_genomes_project X 47072512 47072621 - Mir717 miRNA miRNA MGP_WSBEiJ_T0095867.1 MGP_WSBEiJ_G0035160.1 mouse_genomes_project X 128893590 128940232 - MGP_WSBEiJ_P0095867 Sytl4 protein_coding protein_coding MGP_WSBEiJ_T0095868.1 MGP_WSBEiJ_G0035160.1 mouse_genomes_project X 128903419 128940232 - MGP_WSBEiJ_P0095868 Sytl4 protein_coding protein_coding MGP_WSBEiJ_T0095869.1 MGP_WSBEiJ_G0035160.1 mouse_genomes_project X 128907286 128918466 - Sytl4 protein_coding processed_transcript MGP_WSBEiJ_T0095870.1 MGP_WSBEiJ_G0035160.1 mouse_genomes_project X 128909807 128940229 - MGP_WSBEiJ_P0095870 Sytl4 protein_coding protein_coding MGP_WSBEiJ_T0096429.1 MGP_WSBEiJ_G0035315.1 mouse_genomes_project X 153595235 153597254 + MGP_WSBEiJ_P0096429 protein_coding protein_coding MGP_WSBEiJ_T0096430.1 MGP_WSBEiJ_G0035315.1 mouse_genomes_project X 153595237 153597254 + MGP_WSBEiJ_P0096430 protein_coding protein_coding MGP_WSBEiJ_T0015806.1 MGP_WSBEiJ_G0013936.1 mouse_genomes_project X 50650842 50651665 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016343.1 MGP_WSBEiJ_G0014473.1 mouse_genomes_project X 161933363 161934189 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015919.1 MGP_WSBEiJ_G0014049.1 mouse_genomes_project X 74945917 74946076 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095337.1 MGP_WSBEiJ_G0035001.1 mouse_genomes_project X 84716045 84718800 - MGP_WSBEiJ_P0095337 4930415L06Rik protein_coding protein_coding MGP_WSBEiJ_T0095733.1 MGP_WSBEiJ_G0035111.1 mouse_genomes_project X 102075940 102089349 + MGP_WSBEiJ_P0095733 Lpar4 protein_coding protein_coding MGP_WSBEiJ_T0098713.1 MGP_WSBEiJ_G0037376.1 mouse_genomes_project X 149303998 149304098 - Gm25895 snRNA snRNA MGP_WSBEiJ_T0010986.1 MGP_WSBEiJ_G0009143.1 mouse_genomes_project X 66379568 66379660 - Gm23945 miRNA miRNA MGP_WSBEiJ_T0015795.1 MGP_WSBEiJ_G0013925.1 mouse_genomes_project X 47443081 47443404 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095856.1 MGP_WSBEiJ_G0035156.1 mouse_genomes_project X 128540684 128649223 - MGP_WSBEiJ_P0095856 Pcdh19 protein_coding protein_coding MGP_WSBEiJ_T0095857.1 MGP_WSBEiJ_G0035156.1 mouse_genomes_project X 128540699 128647505 - MGP_WSBEiJ_P0095857 Pcdh19 protein_coding protein_coding MGP_WSBEiJ_T0095858.1 MGP_WSBEiJ_G0035156.1 mouse_genomes_project X 128540703 128646134 - MGP_WSBEiJ_P0095858 Pcdh19 protein_coding protein_coding MGP_WSBEiJ_T0095859.1 MGP_WSBEiJ_G0035156.1 mouse_genomes_project X 128540704 128545836 - MGP_WSBEiJ_P0095859 Pcdh19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095860.1 MGP_WSBEiJ_G0035156.1 mouse_genomes_project X 128641593 128645232 - Pcdh19 protein_coding processed_transcript MGP_WSBEiJ_T0015734.1 MGP_WSBEiJ_G0013864.1 mouse_genomes_project X 31533639 31533796 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096191.1 MGP_WSBEiJ_G0035264.1 mouse_genomes_project X 140646990 140705682 - MGP_WSBEiJ_P0096191 Amot protein_coding protein_coding MGP_WSBEiJ_T0096192.1 MGP_WSBEiJ_G0035264.1 mouse_genomes_project X 140652428 140687621 - MGP_WSBEiJ_P0096192 Amot protein_coding protein_coding MGP_WSBEiJ_T0096193.1 MGP_WSBEiJ_G0035264.1 mouse_genomes_project X 140660335 140662500 - Amot protein_coding retained_intron MGP_WSBEiJ_T0096194.1 MGP_WSBEiJ_G0035264.1 mouse_genomes_project X 140676294 140705690 - MGP_WSBEiJ_P0096194 Amot protein_coding protein_coding MGP_WSBEiJ_T0016260.1 MGP_WSBEiJ_G0014390.1 mouse_genomes_project X 141785508 141786716 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016027.1 MGP_WSBEiJ_G0014157.1 mouse_genomes_project X 96706582 96707462 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016050.1 MGP_WSBEiJ_G0014180.1 mouse_genomes_project X 98661199 98661765 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096147.1 MGP_WSBEiJ_G0035254.1 mouse_genomes_project X 138060948 138168850 - MGP_WSBEiJ_P0096147 Ammecr1 protein_coding protein_coding MGP_WSBEiJ_T0015876.1 MGP_WSBEiJ_G0014006.1 mouse_genomes_project X 65357356 65360913 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015877.1 MGP_WSBEiJ_G0014007.1 mouse_genomes_project X 65403247 65403740 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094453.1 MGP_WSBEiJ_G0034758.1 mouse_genomes_project X 32233809 32234037 + MGP_WSBEiJ_P0094453 protein_coding protein_coding MGP_WSBEiJ_T0015988.1 MGP_WSBEiJ_G0014118.1 mouse_genomes_project X 89339528 89340146 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016161.1 MGP_WSBEiJ_G0014291.1 mouse_genomes_project X 125493551 125494227 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094702.1 MGP_WSBEiJ_G0034847.1 mouse_genomes_project X 51472465 51498262 + MGP_WSBEiJ_P0094702 Slc9a6 protein_coding protein_coding MGP_WSBEiJ_T0094703.1 MGP_WSBEiJ_G0034847.1 mouse_genomes_project X 51472483 51527566 + MGP_WSBEiJ_P0094703 Slc9a6 protein_coding protein_coding MGP_WSBEiJ_T0094704.1 MGP_WSBEiJ_G0034847.1 mouse_genomes_project X 51472525 51527177 + MGP_WSBEiJ_P0094704 Slc9a6 protein_coding protein_coding MGP_WSBEiJ_T0094705.1 MGP_WSBEiJ_G0034847.1 mouse_genomes_project X 51521589 51527165 + Slc9a6 protein_coding retained_intron MGP_WSBEiJ_T0015834.1 MGP_WSBEiJ_G0013964.1 mouse_genomes_project X 56492490 56492925 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011580.1 MGP_WSBEiJ_G0009737.1 mouse_genomes_project X 135823721 135824023 - Gm22025 misc_RNA misc_RNA MGP_WSBEiJ_T0016181.1 MGP_WSBEiJ_G0014311.1 mouse_genomes_project X 129835694 129836600 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095720.1 MGP_WSBEiJ_G0035106.1 mouse_genomes_project X 101337811 101353727 - MGP_WSBEiJ_P0095720 Taf9b protein_coding protein_coding MGP_WSBEiJ_T0095721.1 MGP_WSBEiJ_G0035106.1 mouse_genomes_project X 101337811 101352470 - MGP_WSBEiJ_P0095721 Taf9b protein_coding protein_coding MGP_WSBEiJ_T0095722.1 MGP_WSBEiJ_G0035106.1 mouse_genomes_project X 101350908 101353319 - MGP_WSBEiJ_P0095722 Taf9b protein_coding protein_coding MGP_WSBEiJ_T0010928.1 MGP_WSBEiJ_G0009085.1 mouse_genomes_project X 1838905 1838973 - Mir188 miRNA miRNA MGP_WSBEiJ_T0016107.1 MGP_WSBEiJ_G0014237.1 mouse_genomes_project X 109167500 109168851 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094571.1 MGP_WSBEiJ_G0034795.1 mouse_genomes_project X 42778806 42807046 + MGP_WSBEiJ_P0094571 Xpnpep2 protein_coding protein_coding MGP_WSBEiJ_T0094572.1 MGP_WSBEiJ_G0034795.1 mouse_genomes_project X 42779000 42804086 + MGP_WSBEiJ_P0094572 Xpnpep2 protein_coding protein_coding MGP_WSBEiJ_T0094573.1 MGP_WSBEiJ_G0034795.1 mouse_genomes_project X 42779002 42782239 + Xpnpep2 protein_coding processed_transcript MGP_WSBEiJ_T0094574.1 MGP_WSBEiJ_G0034795.1 mouse_genomes_project X 42779010 42806735 + MGP_WSBEiJ_P0094574 Xpnpep2 protein_coding protein_coding MGP_WSBEiJ_T0094575.1 MGP_WSBEiJ_G0034795.1 mouse_genomes_project X 42797808 42801222 + Xpnpep2 protein_coding processed_transcript MGP_WSBEiJ_T0096344.1 MGP_WSBEiJ_G0035286.1 mouse_genomes_project X 147680934 147686509 - Tspyl2 protein_coding retained_intron MGP_WSBEiJ_T0096345.1 MGP_WSBEiJ_G0035286.1 mouse_genomes_project X 147680934 147686509 - Tspyl2 protein_coding retained_intron MGP_WSBEiJ_T0096346.1 MGP_WSBEiJ_G0035286.1 mouse_genomes_project X 147680937 147686509 - MGP_WSBEiJ_P0096346 Tspyl2 protein_coding protein_coding MGP_WSBEiJ_T0096347.1 MGP_WSBEiJ_G0035286.1 mouse_genomes_project X 147683383 147685928 - MGP_WSBEiJ_P0096347 Tspyl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096348.1 MGP_WSBEiJ_G0035286.1 mouse_genomes_project X 147684347 147685885 - Tspyl2 protein_coding retained_intron MGP_WSBEiJ_T0094898.1 MGP_WSBEiJ_G0034914.1 mouse_genomes_project X 68338576 68350415 + Bgn protein_coding processed_transcript MGP_WSBEiJ_T0094899.1 MGP_WSBEiJ_G0034914.1 mouse_genomes_project X 68338576 68353337 + MGP_WSBEiJ_P0094899 Bgn protein_coding protein_coding MGP_WSBEiJ_T0094900.1 MGP_WSBEiJ_G0034914.1 mouse_genomes_project X 68338597 68350067 + Bgn protein_coding retained_intron MGP_WSBEiJ_T0094901.1 MGP_WSBEiJ_G0034914.1 mouse_genomes_project X 68338607 68341272 + Bgn protein_coding retained_intron MGP_WSBEiJ_T0094902.1 MGP_WSBEiJ_G0034914.1 mouse_genomes_project X 68338609 68353333 + MGP_WSBEiJ_P0094902 Bgn protein_coding protein_coding MGP_WSBEiJ_T0094903.1 MGP_WSBEiJ_G0034914.1 mouse_genomes_project X 68338613 68350051 + Bgn protein_coding retained_intron MGP_WSBEiJ_T0094904.1 MGP_WSBEiJ_G0034914.1 mouse_genomes_project X 68349725 68350979 + Bgn protein_coding processed_transcript MGP_WSBEiJ_T0094905.1 MGP_WSBEiJ_G0034914.1 mouse_genomes_project X 68352307 68353330 + Bgn protein_coding processed_transcript MGP_WSBEiJ_T0015943.1 MGP_WSBEiJ_G0014073.1 mouse_genomes_project X 82552764 82553769 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093997.1 MGP_WSBEiJ_G0034617.1 mouse_genomes_project X 2177087 2193366 + MGP_WSBEiJ_P0093997 Foxp3 protein_coding protein_coding MGP_WSBEiJ_T0093998.1 MGP_WSBEiJ_G0034617.1 mouse_genomes_project X 2177104 2193357 + MGP_WSBEiJ_P0093998 Foxp3 protein_coding protein_coding MGP_WSBEiJ_T0093999.1 MGP_WSBEiJ_G0034617.1 mouse_genomes_project X 2177894 2193357 + MGP_WSBEiJ_P0093999 Foxp3 protein_coding protein_coding MGP_WSBEiJ_T0094000.1 MGP_WSBEiJ_G0034617.1 mouse_genomes_project X 2183647 2193366 + MGP_WSBEiJ_P0094000 Foxp3 protein_coding protein_coding MGP_WSBEiJ_T0011016.1 MGP_WSBEiJ_G0009173.1 mouse_genomes_project X 129760687 129760788 + Mir7093 miRNA miRNA MGP_WSBEiJ_T0015651.1 MGP_WSBEiJ_G0013781.1 mouse_genomes_project X 601265 601505 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098712.1 MGP_WSBEiJ_G0037375.1 mouse_genomes_project X 148959091 148959198 - Gm25793 snRNA snRNA MGP_WSBEiJ_T0016095.1 MGP_WSBEiJ_G0014225.1 mouse_genomes_project X 107557254 107561452 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098658.1 MGP_WSBEiJ_G0037321.1 mouse_genomes_project X 17558743 17558853 + Gm26131 snRNA snRNA MGP_WSBEiJ_T0009238.1 MGP_WSBEiJ_G0007426.1 mouse_genomes_project X 70839178 70848915 - lincRNA lincRNA MGP_WSBEiJ_T0094556.1 MGP_WSBEiJ_G0034792.1 mouse_genomes_project X 42482441 42560463 - MGP_WSBEiJ_P0094556 Smarca1 protein_coding protein_coding MGP_WSBEiJ_T0094557.1 MGP_WSBEiJ_G0034792.1 mouse_genomes_project X 42482443 42560463 - MGP_WSBEiJ_P0094557 Smarca1 protein_coding protein_coding MGP_WSBEiJ_T0094558.1 MGP_WSBEiJ_G0034792.1 mouse_genomes_project X 42482706 42560496 - MGP_WSBEiJ_P0094558 Smarca1 protein_coding protein_coding MGP_WSBEiJ_T0094559.1 MGP_WSBEiJ_G0034792.1 mouse_genomes_project X 42515470 42560340 - MGP_WSBEiJ_P0094559 Smarca1 protein_coding protein_coding MGP_WSBEiJ_T0094560.1 MGP_WSBEiJ_G0034792.1 mouse_genomes_project X 42540075 42560376 - MGP_WSBEiJ_P0094560 Smarca1 protein_coding protein_coding MGP_WSBEiJ_T0094561.1 MGP_WSBEiJ_G0034792.1 mouse_genomes_project X 42555113 42560885 - MGP_WSBEiJ_P0094561 Smarca1 protein_coding protein_coding MGP_WSBEiJ_T0094562.1 MGP_WSBEiJ_G0034792.1 mouse_genomes_project X 42557762 42560918 - Smarca1 protein_coding processed_transcript MGP_WSBEiJ_T0101156.1 MGP_WSBEiJ_G0039613.1 mouse_genomes_project X 89729359 89731986 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099910.1 MGP_WSBEiJ_G0038573.1 mouse_genomes_project X 63354825 63354951 + Gm22332 snoRNA snoRNA MGP_WSBEiJ_T0015998.1 MGP_WSBEiJ_G0014128.1 mouse_genomes_project X 90154591 90156560 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016303.1 MGP_WSBEiJ_G0014433.1 mouse_genomes_project X 153110398 153110619 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011033.1 MGP_WSBEiJ_G0009190.1 mouse_genomes_project X 147186025 147186101 + Mir3113 miRNA miRNA MGP_WSBEiJ_T0005498.1 MGP_WSBEiJ_G0004630.1 mouse_genomes_project X 31612551 31613703 + Gm15008 antisense antisense MGP_WSBEiJ_T0015835.1 MGP_WSBEiJ_G0013965.1 mouse_genomes_project X 56493874 56494452 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096465.1 MGP_WSBEiJ_G0035321.1 mouse_genomes_project X 155414207 155554802 + MGP_WSBEiJ_P0096465 Map3k15 protein_coding protein_coding MGP_WSBEiJ_T0094972.1 MGP_WSBEiJ_G0034928.1 mouse_genomes_project X 68766887 68769214 + MGP_WSBEiJ_P0094972 Avpr2 protein_coding protein_coding MGP_WSBEiJ_T0094973.1 MGP_WSBEiJ_G0034928.1 mouse_genomes_project X 68766888 68768207 + Avpr2 protein_coding processed_transcript MGP_WSBEiJ_T0094974.1 MGP_WSBEiJ_G0034928.1 mouse_genomes_project X 68766895 68770288 + MGP_WSBEiJ_P0094974 Avpr2 protein_coding protein_coding MGP_WSBEiJ_T0094975.1 MGP_WSBEiJ_G0034928.1 mouse_genomes_project X 68766899 68768983 + MGP_WSBEiJ_P0094975 Avpr2 protein_coding protein_coding MGP_WSBEiJ_T0016104.1 MGP_WSBEiJ_G0014234.1 mouse_genomes_project X 108125061 108126523 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015753.1 MGP_WSBEiJ_G0013883.1 mouse_genomes_project X 36336985 36337369 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094428.1 MGP_WSBEiJ_G0034742.1 mouse_genomes_project X 31613043 31693121 - MGP_WSBEiJ_P0094428 Sept6 protein_coding protein_coding MGP_WSBEiJ_T0094429.1 MGP_WSBEiJ_G0034742.1 mouse_genomes_project X 31615163 31693121 - MGP_WSBEiJ_P0094429 Sept6 protein_coding protein_coding MGP_WSBEiJ_T0094430.1 MGP_WSBEiJ_G0034742.1 mouse_genomes_project X 31616748 31693121 - MGP_WSBEiJ_P0094430 Sept6 protein_coding protein_coding MGP_WSBEiJ_T0094431.1 MGP_WSBEiJ_G0034742.1 mouse_genomes_project X 31670055 31696314 - MGP_WSBEiJ_P0094431 Sept6 protein_coding protein_coding MGP_WSBEiJ_T0094432.1 MGP_WSBEiJ_G0034742.1 mouse_genomes_project X 31675360 31692956 - Sept6 protein_coding retained_intron MGP_WSBEiJ_T0015854.1 MGP_WSBEiJ_G0013984.1 mouse_genomes_project X 60852744 60854872 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094479.1 MGP_WSBEiJ_G0034774.1 mouse_genomes_project X 33007792 33033403 + MGP_WSBEiJ_P0094479 Atp1b4 protein_coding protein_coding MGP_WSBEiJ_T0094480.1 MGP_WSBEiJ_G0034774.1 mouse_genomes_project X 33007792 33033403 + MGP_WSBEiJ_P0094480 Atp1b4 protein_coding protein_coding MGP_WSBEiJ_T0010971.1 MGP_WSBEiJ_G0009128.1 mouse_genomes_project X 61658950 61659028 - Mir883b miRNA miRNA MGP_WSBEiJ_T0015694.1 MGP_WSBEiJ_G0013824.1 mouse_genomes_project X 10271431 10271973 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005527.1 MGP_WSBEiJ_G0004655.1 mouse_genomes_project X 139663396 139684259 + antisense antisense MGP_WSBEiJ_T0005528.1 MGP_WSBEiJ_G0004655.1 mouse_genomes_project X 139677819 139684256 + antisense antisense MGP_WSBEiJ_T0015790.1 MGP_WSBEiJ_G0013920.1 mouse_genomes_project X 45835931 45837031 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015755.1 MGP_WSBEiJ_G0013885.1 mouse_genomes_project X 36571107 36571773 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099905.1 MGP_WSBEiJ_G0038568.1 mouse_genomes_project X 32400820 32400964 - snoRNA snoRNA MGP_WSBEiJ_T0095327.1 MGP_WSBEiJ_G0034994.1 mouse_genomes_project X 80578228 80599098 + MGP_WSBEiJ_P0095327 5430427O19Rik protein_coding protein_coding MGP_WSBEiJ_T0099924.1 MGP_WSBEiJ_G0038587.1 mouse_genomes_project X 88118813 88118946 + Gm23454 snoRNA snoRNA MGP_WSBEiJ_T0015663.1 MGP_WSBEiJ_G0013793.1 mouse_genomes_project X 2666448 2666834 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094134.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2754880 2764386 - MGP_WSBEiJ_P0094134 Wdr13 protein_coding protein_coding MGP_WSBEiJ_T0094135.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2754882 2764436 - MGP_WSBEiJ_P0094135 Wdr13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094136.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2754903 2764348 - MGP_WSBEiJ_P0094136 Wdr13 protein_coding protein_coding MGP_WSBEiJ_T0094137.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2756883 2764401 - MGP_WSBEiJ_P0094137 Wdr13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094138.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2756987 2764398 - MGP_WSBEiJ_P0094138 Wdr13 protein_coding protein_coding MGP_WSBEiJ_T0094139.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2757280 2760095 - Wdr13 protein_coding retained_intron MGP_WSBEiJ_T0094140.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2759611 2764397 - Wdr13 protein_coding processed_transcript MGP_WSBEiJ_T0094141.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2760718 2764423 - MGP_WSBEiJ_P0094141 Wdr13 protein_coding protein_coding MGP_WSBEiJ_T0094142.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2761295 2764089 - Wdr13 protein_coding retained_intron MGP_WSBEiJ_T0094143.1 MGP_WSBEiJ_G0034646.1 mouse_genomes_project X 2763694 2764470 - Wdr13 protein_coding processed_transcript MGP_WSBEiJ_T0015925.1 MGP_WSBEiJ_G0014055.1 mouse_genomes_project X 77063173 77063459 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016206.1 MGP_WSBEiJ_G0014336.1 mouse_genomes_project X 134317393 134318103 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018006.1 MGP_WSBEiJ_G0015192.1 mouse_genomes_project X 15649465 15670392 + A230072C01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018007.1 MGP_WSBEiJ_G0015192.1 mouse_genomes_project X 15649894 15670406 + A230072C01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0095235.1 MGP_WSBEiJ_G0034963.1 mouse_genomes_project X 70327647 70333750 - MGP_WSBEiJ_P0095235 Mtcp1 protein_coding protein_coding MGP_WSBEiJ_T0095236.1 MGP_WSBEiJ_G0034963.1 mouse_genomes_project X 70327853 70333625 - Mtcp1 protein_coding processed_transcript MGP_WSBEiJ_T0095237.1 MGP_WSBEiJ_G0034963.1 mouse_genomes_project X 70327980 70333795 - MGP_WSBEiJ_P0095237 Mtcp1 protein_coding protein_coding MGP_WSBEiJ_T0095238.1 MGP_WSBEiJ_G0034963.1 mouse_genomes_project X 70330375 70333775 - Mtcp1 protein_coding retained_intron MGP_WSBEiJ_T0002441.1 MGP_WSBEiJ_G0002357.1 mouse_genomes_project X 161309805 161310149 - TEC TEC MGP_WSBEiJ_T0016020.1 MGP_WSBEiJ_G0014150.1 mouse_genomes_project X 95211949 95213087 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094184.1 MGP_WSBEiJ_G0034661.1 mouse_genomes_project X 3312127 3447168 + MGP_WSBEiJ_P0094184 protein_coding protein_coding MGP_WSBEiJ_T0011559.1 MGP_WSBEiJ_G0009716.1 mouse_genomes_project X 63471175 63471303 + Gm27838 misc_RNA misc_RNA MGP_WSBEiJ_T0098672.1 MGP_WSBEiJ_G0037335.1 mouse_genomes_project X 54056784 54056878 + Gm26487 snRNA snRNA MGP_WSBEiJ_T0016191.1 MGP_WSBEiJ_G0014321.1 mouse_genomes_project X 131799012 131799419 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095423.1 MGP_WSBEiJ_G0035026.1 mouse_genomes_project X 91036790 91114085 + MGP_WSBEiJ_P0095423 Msn protein_coding protein_coding MGP_WSBEiJ_T0095424.1 MGP_WSBEiJ_G0035026.1 mouse_genomes_project X 91036805 91098482 + Msn protein_coding processed_transcript MGP_WSBEiJ_T0095425.1 MGP_WSBEiJ_G0035026.1 mouse_genomes_project X 91036845 91096406 + Msn protein_coding processed_transcript MGP_WSBEiJ_T0015792.1 MGP_WSBEiJ_G0013922.1 mouse_genomes_project X 45856409 45857098 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094456.1 MGP_WSBEiJ_G0034761.1 mouse_genomes_project X 32250436 32251764 + MGP_WSBEiJ_P0094456 protein_coding protein_coding MGP_WSBEiJ_T0011560.1 MGP_WSBEiJ_G0009717.1 mouse_genomes_project X 77538028 77538131 - Gm23671 misc_RNA misc_RNA MGP_WSBEiJ_T0010939.1 MGP_WSBEiJ_G0009096.1 mouse_genomes_project X 31063448 31063585 - Gm44485 miRNA miRNA MGP_WSBEiJ_T0015996.1 MGP_WSBEiJ_G0014126.1 mouse_genomes_project X 89723430 89724060 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093971.1 MGP_WSBEiJ_G0034607.1 mouse_genomes_project X 700186 702387 - MGP_WSBEiJ_P0093971 AU022751 protein_coding protein_coding MGP_WSBEiJ_T0093972.1 MGP_WSBEiJ_G0034607.1 mouse_genomes_project X 700186 702387 - MGP_WSBEiJ_P0093972 AU022751 protein_coding protein_coding MGP_WSBEiJ_T0010938.1 MGP_WSBEiJ_G0009095.1 mouse_genomes_project X 18646249 18646351 + Gm25299 miRNA miRNA MGP_WSBEiJ_T0096338.1 MGP_WSBEiJ_G0035285.1 mouse_genomes_project X 147574970 147617257 + MGP_WSBEiJ_P0096338 Kdm5c protein_coding protein_coding MGP_WSBEiJ_T0096339.1 MGP_WSBEiJ_G0035285.1 mouse_genomes_project X 147575179 147618023 + MGP_WSBEiJ_P0096339 Kdm5c protein_coding protein_coding MGP_WSBEiJ_T0096340.1 MGP_WSBEiJ_G0035285.1 mouse_genomes_project X 147575204 147589502 + Kdm5c protein_coding retained_intron MGP_WSBEiJ_T0096341.1 MGP_WSBEiJ_G0035285.1 mouse_genomes_project X 147575222 147617261 + MGP_WSBEiJ_P0096341 Kdm5c protein_coding protein_coding MGP_WSBEiJ_T0096342.1 MGP_WSBEiJ_G0035285.1 mouse_genomes_project X 147613294 147615045 + MGP_WSBEiJ_P0096342 Kdm5c protein_coding protein_coding MGP_WSBEiJ_T0096343.1 MGP_WSBEiJ_G0035285.1 mouse_genomes_project X 147615401 147616885 + MGP_WSBEiJ_P0096343 Kdm5c protein_coding protein_coding MGP_WSBEiJ_T0096662.1 MGP_WSBEiJ_G0035372.1 mouse_genomes_project X 165263436 165267725 - MGP_WSBEiJ_P0096662 4933400A11Rik protein_coding protein_coding MGP_WSBEiJ_T0096663.1 MGP_WSBEiJ_G0035372.1 mouse_genomes_project X 165263557 165267768 - MGP_WSBEiJ_P0096663 4933400A11Rik protein_coding protein_coding MGP_WSBEiJ_T0096664.1 MGP_WSBEiJ_G0035372.1 mouse_genomes_project X 165263604 165267690 - MGP_WSBEiJ_P0096664 4933400A11Rik protein_coding protein_coding MGP_WSBEiJ_T0094445.1 MGP_WSBEiJ_G0034750.1 mouse_genomes_project X 31926541 31928235 - MGP_WSBEiJ_P0094445 Gm9 protein_coding protein_coding MGP_WSBEiJ_T0098666.1 MGP_WSBEiJ_G0037329.1 mouse_genomes_project X 42995155 42995259 + Gm22528 snRNA snRNA MGP_WSBEiJ_T0015847.1 MGP_WSBEiJ_G0013977.1 mouse_genomes_project X 58096816 58098647 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015972.1 MGP_WSBEiJ_G0014102.1 mouse_genomes_project X 86725159 86727398 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094691.1 MGP_WSBEiJ_G0034842.1 mouse_genomes_project X 51189693 51208965 + MGP_WSBEiJ_P0094691 Zfp449 protein_coding protein_coding MGP_WSBEiJ_T0005507.1 MGP_WSBEiJ_G0004638.1 mouse_genomes_project X 55783763 55788185 + Gm14662 antisense antisense MGP_WSBEiJ_T0094127.1 MGP_WSBEiJ_G0034644.1 mouse_genomes_project X 2690281 2703870 - MGP_WSBEiJ_P0094127 Suv39h1 protein_coding protein_coding MGP_WSBEiJ_T0094128.1 MGP_WSBEiJ_G0034644.1 mouse_genomes_project X 2690536 2703731 - Suv39h1 protein_coding retained_intron MGP_WSBEiJ_T0094129.1 MGP_WSBEiJ_G0034644.1 mouse_genomes_project X 2690545 2703368 - MGP_WSBEiJ_P0094129 Suv39h1 protein_coding protein_coding MGP_WSBEiJ_T0094130.1 MGP_WSBEiJ_G0034644.1 mouse_genomes_project X 2696519 2703839 - MGP_WSBEiJ_P0094130 Suv39h1 protein_coding protein_coding MGP_WSBEiJ_T0094131.1 MGP_WSBEiJ_G0034644.1 mouse_genomes_project X 2699539 2703423 - Suv39h1 protein_coding retained_intron MGP_WSBEiJ_T0101161.1 MGP_WSBEiJ_G0039618.1 mouse_genomes_project X 101477382 101528732 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015647.1 MGP_WSBEiJ_G0013777.1 mouse_genomes_project X 209068 211209 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016045.1 MGP_WSBEiJ_G0014175.1 mouse_genomes_project X 98392096 98392520 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015983.1 MGP_WSBEiJ_G0014113.1 mouse_genomes_project X 88925663 88926694 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099929.1 MGP_WSBEiJ_G0038592.1 mouse_genomes_project X 109012142 109012266 - Gm23985 snoRNA snoRNA MGP_WSBEiJ_T0016228.1 MGP_WSBEiJ_G0014358.1 mouse_genomes_project X 137244283 137244541 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011038.1 MGP_WSBEiJ_G0009195.1 mouse_genomes_project X 162500117 162500226 - Gm22368 miRNA miRNA MGP_WSBEiJ_T0015702.1 MGP_WSBEiJ_G0013832.1 mouse_genomes_project X 13092946 13093103 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015896.1 MGP_WSBEiJ_G0014026.1 mouse_genomes_project X 70379225 70379873 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009242.1 MGP_WSBEiJ_G0007429.1 mouse_genomes_project X 85942139 85942768 + 1700010D01Rik lincRNA lincRNA MGP_WSBEiJ_T0016054.1 MGP_WSBEiJ_G0014184.1 mouse_genomes_project X 98862002 98862310 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094687.1 MGP_WSBEiJ_G0034838.1 mouse_genomes_project X 48476467 48492925 - MGP_WSBEiJ_P0094687 1700013H16Rik protein_coding protein_coding MGP_WSBEiJ_T0016098.1 MGP_WSBEiJ_G0014228.1 mouse_genomes_project X 107867665 107867828 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096522.1 MGP_WSBEiJ_G0035335.1 mouse_genomes_project X 158363261 158394438 - MGP_WSBEiJ_P0096522 Syap1 protein_coding protein_coding MGP_WSBEiJ_T0096523.1 MGP_WSBEiJ_G0035335.1 mouse_genomes_project X 158364113 158369470 - Syap1 protein_coding retained_intron MGP_WSBEiJ_T0095538.1 MGP_WSBEiJ_G0035056.1 mouse_genomes_project X 96150780 96158249 + MGP_WSBEiJ_P0095538 Foxo4 protein_coding protein_coding MGP_WSBEiJ_T0095539.1 MGP_WSBEiJ_G0035056.1 mouse_genomes_project X 96150819 96152688 + Foxo4 protein_coding processed_transcript MGP_WSBEiJ_T0095540.1 MGP_WSBEiJ_G0035056.1 mouse_genomes_project X 96151073 96155488 + MGP_WSBEiJ_P0095540 Foxo4 protein_coding protein_coding MGP_WSBEiJ_T0095367.1 MGP_WSBEiJ_G0035013.1 mouse_genomes_project X 89096982 89122422 - MGP_WSBEiJ_P0095367 Eif2s3x protein_coding protein_coding MGP_WSBEiJ_T0095368.1 MGP_WSBEiJ_G0035013.1 mouse_genomes_project X 89107961 89122364 - MGP_WSBEiJ_P0095368 Eif2s3x protein_coding protein_coding MGP_WSBEiJ_T0095369.1 MGP_WSBEiJ_G0035013.1 mouse_genomes_project X 89111248 89122575 - Eif2s3x protein_coding processed_transcript MGP_WSBEiJ_T0094637.1 MGP_WSBEiJ_G0034814.1 mouse_genomes_project X 44642133 44643063 - MGP_WSBEiJ_P0094637 Olfr1323 protein_coding protein_coding MGP_WSBEiJ_T0016157.1 MGP_WSBEiJ_G0014287.1 mouse_genomes_project X 124487667 124488669 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018037.1 MGP_WSBEiJ_G0015203.1 mouse_genomes_project X 97194409 97308409 + Gm14858 processed_transcript processed_transcript MGP_WSBEiJ_T0018038.1 MGP_WSBEiJ_G0015203.1 mouse_genomes_project X 97194538 97200410 + Gm14858 processed_transcript processed_transcript MGP_WSBEiJ_T0094454.1 MGP_WSBEiJ_G0034759.1 mouse_genomes_project X 32233809 32234036 + MGP_WSBEiJ_P0094454 protein_coding protein_coding MGP_WSBEiJ_T0095925.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717841 129721783 + MGP_WSBEiJ_P0095925 Armcx1 protein_coding protein_coding MGP_WSBEiJ_T0095926.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717848 129721792 + MGP_WSBEiJ_P0095926 Armcx1 protein_coding protein_coding MGP_WSBEiJ_T0095927.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717866 129719192 + Armcx1 protein_coding processed_transcript MGP_WSBEiJ_T0095928.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717866 129721785 + MGP_WSBEiJ_P0095928 Armcx1 protein_coding protein_coding MGP_WSBEiJ_T0095929.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717867 129721792 + MGP_WSBEiJ_P0095929 Armcx1 protein_coding protein_coding MGP_WSBEiJ_T0095930.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717881 129719382 + Armcx1 protein_coding processed_transcript MGP_WSBEiJ_T0095931.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717881 129718907 + Armcx1 protein_coding processed_transcript MGP_WSBEiJ_T0095932.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717891 129721783 + MGP_WSBEiJ_P0095932 Armcx1 protein_coding protein_coding MGP_WSBEiJ_T0095933.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129717898 129721792 + MGP_WSBEiJ_P0095933 Armcx1 protein_coding protein_coding MGP_WSBEiJ_T0095934.1 MGP_WSBEiJ_G0035177.1 mouse_genomes_project X 129719135 129720390 + Armcx1 protein_coding processed_transcript MGP_WSBEiJ_T0098721.1 MGP_WSBEiJ_G0037384.1 mouse_genomes_project X 159807695 159807801 - Gm25367 snRNA snRNA MGP_WSBEiJ_T0094784.1 MGP_WSBEiJ_G0034874.1 mouse_genomes_project X 59959441 59960812 + MGP_WSBEiJ_P0094784 Ctag2 protein_coding protein_coding MGP_WSBEiJ_T0095983.1 MGP_WSBEiJ_G0035191.1 mouse_genomes_project X 131037347 131039118 + MGP_WSBEiJ_P0095983 Arxes1 protein_coding protein_coding MGP_WSBEiJ_T0016177.1 MGP_WSBEiJ_G0014307.1 mouse_genomes_project X 129586929 129588107 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095756.1 MGP_WSBEiJ_G0035117.1 mouse_genomes_project X 102948638 102982778 - MGP_WSBEiJ_P0095756 2610002M06Rik protein_coding protein_coding MGP_WSBEiJ_T0095757.1 MGP_WSBEiJ_G0035117.1 mouse_genomes_project X 102953724 102960583 - 2610002M06Rik protein_coding retained_intron MGP_WSBEiJ_T0015875.1 MGP_WSBEiJ_G0014005.1 mouse_genomes_project X 65357256 65360913 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015728.1 MGP_WSBEiJ_G0013858.1 mouse_genomes_project X 30889760 30890135 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099936.1 MGP_WSBEiJ_G0038599.1 mouse_genomes_project X 125897609 125897738 - Gm25170 snoRNA snoRNA MGP_WSBEiJ_T0015819.1 MGP_WSBEiJ_G0013949.1 mouse_genomes_project X 53567135 53567597 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016053.1 MGP_WSBEiJ_G0014183.1 mouse_genomes_project X 98760901 98761619 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015895.1 MGP_WSBEiJ_G0014025.1 mouse_genomes_project X 70201751 70203680 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016075.1 MGP_WSBEiJ_G0014205.1 mouse_genomes_project X 102328690 102329575 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015837.1 MGP_WSBEiJ_G0013967.1 mouse_genomes_project X 56704883 56705949 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016023.1 MGP_WSBEiJ_G0014153.1 mouse_genomes_project X 95951231 95951514 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099917.1 MGP_WSBEiJ_G0038580.1 mouse_genomes_project X 70026311 70026429 + Gm25520 snoRNA snoRNA MGP_WSBEiJ_T0015668.1 MGP_WSBEiJ_G0013798.1 mouse_genomes_project X 3661745 3662625 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094319.1 MGP_WSBEiJ_G0034708.1 mouse_genomes_project X 15328736 15354717 + MGP_WSBEiJ_P0094319 Uba1 protein_coding protein_coding MGP_WSBEiJ_T0094320.1 MGP_WSBEiJ_G0034708.1 mouse_genomes_project X 15328831 15341121 + Uba1 protein_coding processed_transcript MGP_WSBEiJ_T0094321.1 MGP_WSBEiJ_G0034708.1 mouse_genomes_project X 15329837 15340035 + Uba1 protein_coding processed_transcript MGP_WSBEiJ_T0094322.1 MGP_WSBEiJ_G0034708.1 mouse_genomes_project X 15333715 15354717 + MGP_WSBEiJ_P0094322 Uba1 protein_coding protein_coding MGP_WSBEiJ_T0094323.1 MGP_WSBEiJ_G0034708.1 mouse_genomes_project X 15348894 15352738 + Uba1 protein_coding processed_transcript MGP_WSBEiJ_T0094324.1 MGP_WSBEiJ_G0034708.1 mouse_genomes_project X 15352132 15353743 + Uba1 protein_coding processed_transcript MGP_WSBEiJ_T0016066.1 MGP_WSBEiJ_G0014196.1 mouse_genomes_project X 101303866 101304479 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096581.1 MGP_WSBEiJ_G0035351.1 mouse_genomes_project X 160045404 160078152 + MGP_WSBEiJ_P0096581 Asb9 protein_coding protein_coding MGP_WSBEiJ_T0016258.1 MGP_WSBEiJ_G0014388.1 mouse_genomes_project X 141451608 141452654 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015750.1 MGP_WSBEiJ_G0013880.1 mouse_genomes_project X 35362431 35362710 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094685.1 MGP_WSBEiJ_G0034836.1 mouse_genomes_project X 48374441 48374845 - MGP_WSBEiJ_P0094685 Cxx1c protein_coding protein_coding MGP_WSBEiJ_T0097226.1 MGP_WSBEiJ_G0035907.1 mouse_genomes_project X 30498093 30498368 + Gm25624 scaRNA scaRNA MGP_WSBEiJ_T0016094.1 MGP_WSBEiJ_G0014224.1 mouse_genomes_project X 107407516 107407788 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016328.1 MGP_WSBEiJ_G0014458.1 mouse_genomes_project X 158350101 158350787 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016137.1 MGP_WSBEiJ_G0014267.1 mouse_genomes_project X 115364921 115365174 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015933.1 MGP_WSBEiJ_G0014063.1 mouse_genomes_project X 80121739 80122065 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097229.1 MGP_WSBEiJ_G0035910.1 mouse_genomes_project X 110447980 110448361 + Gm27414 scaRNA scaRNA MGP_WSBEiJ_T0095409.1 MGP_WSBEiJ_G0035021.1 mouse_genomes_project X 90357051 90382005 - MGP_WSBEiJ_P0095409 Amer1 protein_coding protein_coding MGP_WSBEiJ_T0100190.1 MGP_WSBEiJ_G0038757.1 mouse_genomes_project X 147856379 147858411 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0095544.1 MGP_WSBEiJ_G0035059.1 mouse_genomes_project X 96161754 96165603 - MGP_WSBEiJ_P0095544 Il2rg protein_coding protein_coding MGP_WSBEiJ_T0095545.1 MGP_WSBEiJ_G0035059.1 mouse_genomes_project X 96162314 96164782 - MGP_WSBEiJ_P0095545 Il2rg protein_coding protein_coding MGP_WSBEiJ_T0095546.1 MGP_WSBEiJ_G0035059.1 mouse_genomes_project X 96164013 96165538 - Il2rg protein_coding retained_intron MGP_WSBEiJ_T0095547.1 MGP_WSBEiJ_G0035059.1 mouse_genomes_project X 96164543 96165506 - Il2rg protein_coding processed_transcript MGP_WSBEiJ_T0016198.1 MGP_WSBEiJ_G0014328.1 mouse_genomes_project X 132247552 132248150 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016323.1 MGP_WSBEiJ_G0014453.1 mouse_genomes_project X 158060398 158060852 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016231.1 MGP_WSBEiJ_G0014361.1 mouse_genomes_project X 137418504 137418762 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016318.1 MGP_WSBEiJ_G0014448.1 mouse_genomes_project X 155774785 155776733 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015771.1 MGP_WSBEiJ_G0013901.1 mouse_genomes_project X 40426048 40426283 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011012.1 MGP_WSBEiJ_G0009169.1 mouse_genomes_project X 101528832 101528942 + Gm27428 miRNA miRNA MGP_WSBEiJ_T0095764.1 MGP_WSBEiJ_G0035120.1 mouse_genomes_project X 103811898 103812786 - MGP_WSBEiJ_P0095764 Gm379 protein_coding protein_coding MGP_WSBEiJ_T0011006.1 MGP_WSBEiJ_G0009163.1 mouse_genomes_project X 98633851 98633946 - Mir374b miRNA miRNA MGP_WSBEiJ_T0098720.1 MGP_WSBEiJ_G0037383.1 mouse_genomes_project X 158898151 158898271 - Gm26007 snRNA snRNA MGP_WSBEiJ_T0094645.1 MGP_WSBEiJ_G0034818.1 mouse_genomes_project X 45608856 45622951 - MGP_WSBEiJ_P0094645 Rap2c protein_coding protein_coding MGP_WSBEiJ_T0009290.1 MGP_WSBEiJ_G0007455.1 mouse_genomes_project X 156760994 156783212 + lincRNA lincRNA MGP_WSBEiJ_T0005514.1 MGP_WSBEiJ_G0004644.1 mouse_genomes_project X 70498669 70500487 + Gm15063 antisense antisense MGP_WSBEiJ_T0095221.1 MGP_WSBEiJ_G0034959.1 mouse_genomes_project X 70077326 70094826 - MGP_WSBEiJ_P0095221 Smim9 protein_coding protein_coding MGP_WSBEiJ_T0095222.1 MGP_WSBEiJ_G0034959.1 mouse_genomes_project X 70077503 70092687 - MGP_WSBEiJ_P0095222 Smim9 protein_coding protein_coding MGP_WSBEiJ_T0095223.1 MGP_WSBEiJ_G0034959.1 mouse_genomes_project X 70081778 70094843 - Smim9 protein_coding processed_transcript MGP_WSBEiJ_T0100183.1 MGP_WSBEiJ_G0038751.1 mouse_genomes_project X 123380945 123381587 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0016214.1 MGP_WSBEiJ_G0014344.1 mouse_genomes_project X 135802431 135802885 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015768.1 MGP_WSBEiJ_G0013898.1 mouse_genomes_project X 39507010 39507980 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096030.1 MGP_WSBEiJ_G0035215.1 mouse_genomes_project X 132123942 132124238 + MGP_WSBEiJ_P0096030 Vma21-ps protein_coding protein_coding MGP_WSBEiJ_T0009294.1 MGP_WSBEiJ_G0007459.1 mouse_genomes_project X 162128295 162158012 + Gm1720 lincRNA lincRNA MGP_WSBEiJ_T0002439.1 MGP_WSBEiJ_G0002355.1 mouse_genomes_project X 147638667 147640144 - TEC TEC MGP_WSBEiJ_T0018020.1 MGP_WSBEiJ_G0015196.1 mouse_genomes_project X 47737136 47739245 - C430049B03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018021.1 MGP_WSBEiJ_G0015196.1 mouse_genomes_project X 47737297 47739215 - C430049B03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018022.1 MGP_WSBEiJ_G0015196.1 mouse_genomes_project X 47737860 47739243 - C430049B03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018023.1 MGP_WSBEiJ_G0015196.1 mouse_genomes_project X 47738247 47739245 - C430049B03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0015818.1 MGP_WSBEiJ_G0013948.1 mouse_genomes_project X 53293517 53293934 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016039.1 MGP_WSBEiJ_G0014169.1 mouse_genomes_project X 98070175 98070865 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015730.1 MGP_WSBEiJ_G0013860.1 mouse_genomes_project X 30982097 30982593 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094185.1 MGP_WSBEiJ_G0034662.1 mouse_genomes_project X 3312180 3541867 + MGP_WSBEiJ_P0094185 protein_coding protein_coding MGP_WSBEiJ_T0094186.1 MGP_WSBEiJ_G0034662.1 mouse_genomes_project X 3312180 3542305 + MGP_WSBEiJ_P0094186 protein_coding protein_coding MGP_WSBEiJ_T0018016.1 MGP_WSBEiJ_G0015195.1 mouse_genomes_project X 47395630 47397653 - Kis2 processed_transcript processed_transcript MGP_WSBEiJ_T0018017.1 MGP_WSBEiJ_G0015195.1 mouse_genomes_project X 47395630 47397653 - Kis2 processed_transcript processed_transcript MGP_WSBEiJ_T0018018.1 MGP_WSBEiJ_G0015195.1 mouse_genomes_project X 47395630 47397653 - Kis2 processed_transcript processed_transcript MGP_WSBEiJ_T0018019.1 MGP_WSBEiJ_G0015195.1 mouse_genomes_project X 47395632 47398020 - Kis2 processed_transcript processed_transcript MGP_WSBEiJ_T0095229.1 MGP_WSBEiJ_G0034961.1 mouse_genomes_project X 70299629 70313691 + MGP_WSBEiJ_P0095229 Fundc2 protein_coding protein_coding MGP_WSBEiJ_T0095230.1 MGP_WSBEiJ_G0034961.1 mouse_genomes_project X 70299654 70304705 + Fundc2 protein_coding retained_intron MGP_WSBEiJ_T0095231.1 MGP_WSBEiJ_G0034961.1 mouse_genomes_project X 70304330 70311559 + Fundc2 protein_coding processed_transcript MGP_WSBEiJ_T0016002.1 MGP_WSBEiJ_G0014132.1 mouse_genomes_project X 91171045 91172465 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096489.1 MGP_WSBEiJ_G0035327.1 mouse_genomes_project X 156222356 156386299 - MGP_WSBEiJ_P0096489 Cdkl5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096490.1 MGP_WSBEiJ_G0035327.1 mouse_genomes_project X 156222356 156386266 - MGP_WSBEiJ_P0096490 Cdkl5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096491.1 MGP_WSBEiJ_G0035327.1 mouse_genomes_project X 156237869 156450753 - MGP_WSBEiJ_P0096491 Cdkl5 protein_coding protein_coding MGP_WSBEiJ_T0096493.1 MGP_WSBEiJ_G0035327.1 mouse_genomes_project X 156252698 156271292 - Cdkl5 protein_coding processed_transcript MGP_WSBEiJ_T0096494.1 MGP_WSBEiJ_G0035327.1 mouse_genomes_project X 156254939 156386266 - MGP_WSBEiJ_P0096494 Cdkl5 protein_coding protein_coding MGP_WSBEiJ_T0096495.1 MGP_WSBEiJ_G0035327.1 mouse_genomes_project X 156302881 156306433 - Cdkl5 protein_coding retained_intron MGP_WSBEiJ_T0011014.1 MGP_WSBEiJ_G0009171.1 mouse_genomes_project X 125866168 125866278 - Gm26209 miRNA miRNA MGP_WSBEiJ_T0093992.1 MGP_WSBEiJ_G0034616.1 mouse_genomes_project X 2153936 2171696 - MGP_WSBEiJ_P0093992 Ppp1r3f protein_coding protein_coding MGP_WSBEiJ_T0093993.1 MGP_WSBEiJ_G0034616.1 mouse_genomes_project X 2155596 2171661 - MGP_WSBEiJ_P0093993 Ppp1r3f protein_coding protein_coding MGP_WSBEiJ_T0093994.1 MGP_WSBEiJ_G0034616.1 mouse_genomes_project X 2155866 2161703 - Ppp1r3f protein_coding processed_transcript MGP_WSBEiJ_T0093995.1 MGP_WSBEiJ_G0034616.1 mouse_genomes_project X 2156887 2170256 - MGP_WSBEiJ_P0093995 Ppp1r3f protein_coding protein_coding MGP_WSBEiJ_T0093996.1 MGP_WSBEiJ_G0034616.1 mouse_genomes_project X 2158895 2161734 - Ppp1r3f protein_coding processed_transcript MGP_WSBEiJ_T0010934.1 MGP_WSBEiJ_G0009091.1 mouse_genomes_project X 13857780 13857875 - Mir221 miRNA miRNA MGP_WSBEiJ_T0101160.1 MGP_WSBEiJ_G0039617.1 mouse_genomes_project X 97933809 97934547 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016029.1 MGP_WSBEiJ_G0014159.1 mouse_genomes_project X 97117889 97118363 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094397.1 MGP_WSBEiJ_G0034731.1 mouse_genomes_project X 30870524 30875094 + MGP_WSBEiJ_P0094397 Zcchc12 protein_coding protein_coding MGP_WSBEiJ_T0094398.1 MGP_WSBEiJ_G0034731.1 mouse_genomes_project X 30870566 30875102 + MGP_WSBEiJ_P0094398 Zcchc12 protein_coding protein_coding MGP_WSBEiJ_T0094399.1 MGP_WSBEiJ_G0034731.1 mouse_genomes_project X 30870579 30875101 + MGP_WSBEiJ_P0094399 Zcchc12 protein_coding protein_coding MGP_WSBEiJ_T0094400.1 MGP_WSBEiJ_G0034731.1 mouse_genomes_project X 30870606 30875101 + MGP_WSBEiJ_P0094400 Zcchc12 protein_coding protein_coding MGP_WSBEiJ_T0018080.1 MGP_WSBEiJ_G0015213.1 mouse_genomes_project X 148397821 148435139 + 9530051G07Rik processed_transcript processed_transcript MGP_WSBEiJ_T0094196.1 MGP_WSBEiJ_G0034671.1 mouse_genomes_project X 4186527 4220368 - MGP_WSBEiJ_P0094196 Cybb protein_coding protein_coding MGP_WSBEiJ_T0094197.1 MGP_WSBEiJ_G0034671.1 mouse_genomes_project X 4198066 4220313 - MGP_WSBEiJ_P0094197 Cybb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094198.1 MGP_WSBEiJ_G0034671.1 mouse_genomes_project X 4200524 4202677 - Cybb protein_coding retained_intron MGP_WSBEiJ_T0094199.1 MGP_WSBEiJ_G0034671.1 mouse_genomes_project X 4208161 4239771 - MGP_WSBEiJ_P0094199 Cybb protein_coding protein_coding MGP_WSBEiJ_T0094200.1 MGP_WSBEiJ_G0034671.1 mouse_genomes_project X 4216032 4220314 - Cybb protein_coding retained_intron MGP_WSBEiJ_T0018024.1 MGP_WSBEiJ_G0015197.1 mouse_genomes_project X 48425687 48427056 - processed_transcript TEC MGP_WSBEiJ_T0018025.1 MGP_WSBEiJ_G0015197.1 mouse_genomes_project X 48426700 48440980 - processed_transcript lincRNA MGP_WSBEiJ_T0018026.1 MGP_WSBEiJ_G0015197.1 mouse_genomes_project X 48426771 48448260 - processed_transcript lincRNA MGP_WSBEiJ_T0018027.1 MGP_WSBEiJ_G0015197.1 mouse_genomes_project X 48443284 48448454 - processed_transcript lincRNA MGP_WSBEiJ_T0016195.1 MGP_WSBEiJ_G0014325.1 mouse_genomes_project X 132123942 132124238 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015793.1 MGP_WSBEiJ_G0013923.1 mouse_genomes_project X 46248121 46248319 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096073.1 MGP_WSBEiJ_G0035229.1 mouse_genomes_project X 134862026 134862829 - protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0094956.1 MGP_WSBEiJ_G0034925.1 mouse_genomes_project X 68663871 68697337 - MGP_WSBEiJ_P0094956 Pdzd4 protein_coding protein_coding MGP_WSBEiJ_T0094957.1 MGP_WSBEiJ_G0034925.1 mouse_genomes_project X 68663871 68697337 - MGP_WSBEiJ_P0094957 Pdzd4 protein_coding protein_coding MGP_WSBEiJ_T0094225.1 MGP_WSBEiJ_G0034680.1 mouse_genomes_project X 5466444 5467890 + Mid1ip1 protein_coding processed_transcript MGP_WSBEiJ_T0094226.1 MGP_WSBEiJ_G0034680.1 mouse_genomes_project X 5466450 5469827 + MGP_WSBEiJ_P0094226 Mid1ip1 protein_coding protein_coding MGP_WSBEiJ_T0094227.1 MGP_WSBEiJ_G0034680.1 mouse_genomes_project X 5468832 5471133 + MGP_WSBEiJ_P0094227 Mid1ip1 protein_coding protein_coding MGP_WSBEiJ_T0094228.1 MGP_WSBEiJ_G0034680.1 mouse_genomes_project X 5468832 5471133 + MGP_WSBEiJ_P0094228 Mid1ip1 protein_coding protein_coding MGP_WSBEiJ_T0094229.1 MGP_WSBEiJ_G0034680.1 mouse_genomes_project X 5468910 5469827 + MGP_WSBEiJ_P0094229 Mid1ip1 protein_coding protein_coding MGP_WSBEiJ_T0016116.1 MGP_WSBEiJ_G0014246.1 mouse_genomes_project X 110604318 110611096 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015729.1 MGP_WSBEiJ_G0013859.1 mouse_genomes_project X 30890620 30891226 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016164.1 MGP_WSBEiJ_G0014294.1 mouse_genomes_project X 125997870 125999264 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096383.1 MGP_WSBEiJ_G0035303.1 mouse_genomes_project X 150680809 150684120 - MGP_WSBEiJ_P0096383 Sat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096384.1 MGP_WSBEiJ_G0035303.1 mouse_genomes_project X 150680809 150684120 - MGP_WSBEiJ_P0096384 Sat1 protein_coding protein_coding MGP_WSBEiJ_T0096385.1 MGP_WSBEiJ_G0035303.1 mouse_genomes_project X 150680983 150684003 - Sat1 protein_coding retained_intron MGP_WSBEiJ_T0096386.1 MGP_WSBEiJ_G0035303.1 mouse_genomes_project X 150680983 150682576 - Sat1 protein_coding retained_intron MGP_WSBEiJ_T0096387.1 MGP_WSBEiJ_G0035303.1 mouse_genomes_project X 150680983 150681737 - Sat1 protein_coding retained_intron MGP_WSBEiJ_T0096388.1 MGP_WSBEiJ_G0035303.1 mouse_genomes_project X 150680992 150684016 - MGP_WSBEiJ_P0096388 Sat1 protein_coding protein_coding MGP_WSBEiJ_T0096389.1 MGP_WSBEiJ_G0035303.1 mouse_genomes_project X 150683125 150683998 - Sat1 protein_coding retained_intron MGP_WSBEiJ_T0015926.1 MGP_WSBEiJ_G0014056.1 mouse_genomes_project X 77106632 77107781 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016215.1 MGP_WSBEiJ_G0014345.1 mouse_genomes_project X 135988433 135990972 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016241.1 MGP_WSBEiJ_G0014371.1 mouse_genomes_project X 139441965 139443052 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016048.1 MGP_WSBEiJ_G0014178.1 mouse_genomes_project X 98573138 98573567 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016232.1 MGP_WSBEiJ_G0014362.1 mouse_genomes_project X 137607711 137608202 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015917.1 MGP_WSBEiJ_G0014047.1 mouse_genomes_project X 74657280 74658123 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094312.1 MGP_WSBEiJ_G0034707.1 mouse_genomes_project X 15284390 15320044 + MGP_WSBEiJ_P0094312 Rbm10 protein_coding protein_coding MGP_WSBEiJ_T0094313.1 MGP_WSBEiJ_G0034707.1 mouse_genomes_project X 15284509 15320057 + MGP_WSBEiJ_P0094313 Rbm10 protein_coding protein_coding MGP_WSBEiJ_T0094314.1 MGP_WSBEiJ_G0034707.1 mouse_genomes_project X 15284670 15320057 + MGP_WSBEiJ_P0094314 Rbm10 protein_coding protein_coding MGP_WSBEiJ_T0094315.1 MGP_WSBEiJ_G0034707.1 mouse_genomes_project X 15284672 15316127 + Rbm10 protein_coding processed_transcript MGP_WSBEiJ_T0094316.1 MGP_WSBEiJ_G0034707.1 mouse_genomes_project X 15286985 15319840 + MGP_WSBEiJ_P0094316 Rbm10 protein_coding protein_coding MGP_WSBEiJ_T0094317.1 MGP_WSBEiJ_G0034707.1 mouse_genomes_project X 15286985 15319840 + MGP_WSBEiJ_P0094317 Rbm10 protein_coding protein_coding MGP_WSBEiJ_T0094318.1 MGP_WSBEiJ_G0034707.1 mouse_genomes_project X 15286985 15319840 + MGP_WSBEiJ_P0094318 Rbm10 protein_coding protein_coding MGP_WSBEiJ_T0096066.1 MGP_WSBEiJ_G0035226.1 mouse_genomes_project X 134602853 134698661 + MGP_WSBEiJ_P0096066 D330045A20Rik protein_coding protein_coding MGP_WSBEiJ_T0096067.1 MGP_WSBEiJ_G0035226.1 mouse_genomes_project X 134602857 134634580 + D330045A20Rik protein_coding processed_transcript MGP_WSBEiJ_T0096068.1 MGP_WSBEiJ_G0035226.1 mouse_genomes_project X 134602857 134698661 + MGP_WSBEiJ_P0096068 D330045A20Rik protein_coding protein_coding MGP_WSBEiJ_T0096538.1 MGP_WSBEiJ_G0035337.1 mouse_genomes_project X 158467536 158470142 - MGP_WSBEiJ_P0096538 S100g protein_coding protein_coding MGP_WSBEiJ_T0094201.1 MGP_WSBEiJ_G0034672.1 mouse_genomes_project X 4398562 4407358 - MGP_WSBEiJ_P0094201 Dynlt3 protein_coding protein_coding MGP_WSBEiJ_T0094202.1 MGP_WSBEiJ_G0034672.1 mouse_genomes_project X 4400302 4403984 - Dynlt3 protein_coding processed_transcript MGP_WSBEiJ_T0094203.1 MGP_WSBEiJ_G0034672.1 mouse_genomes_project X 4400563 4407358 - Dynlt3 protein_coding processed_transcript MGP_WSBEiJ_T0094204.1 MGP_WSBEiJ_G0034672.1 mouse_genomes_project X 4400625 4401645 - Dynlt3 protein_coding processed_transcript MGP_WSBEiJ_T0015676.1 MGP_WSBEiJ_G0013806.1 mouse_genomes_project X 6356978 6357194 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010941.1 MGP_WSBEiJ_G0009098.1 mouse_genomes_project X 33457358 33457424 - Gm25642 miRNA miRNA MGP_WSBEiJ_T0095952.1 MGP_WSBEiJ_G0035182.1 mouse_genomes_project X 129982605 130026909 - MGP_WSBEiJ_P0095952 Zmat1 protein_coding protein_coding MGP_WSBEiJ_T0095953.1 MGP_WSBEiJ_G0035182.1 mouse_genomes_project X 129982608 130026933 - MGP_WSBEiJ_P0095953 Zmat1 protein_coding protein_coding MGP_WSBEiJ_T0095954.1 MGP_WSBEiJ_G0035182.1 mouse_genomes_project X 129984006 129990150 - Zmat1 protein_coding retained_intron MGP_WSBEiJ_T0016085.1 MGP_WSBEiJ_G0014215.1 mouse_genomes_project X 104526300 104528865 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015851.1 MGP_WSBEiJ_G0013981.1 mouse_genomes_project X 59757905 59759232 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095303.1 MGP_WSBEiJ_G0034990.1 mouse_genomes_project X 78155024 78156235 - MGP_WSBEiJ_P0095303 Tsga8 protein_coding protein_coding MGP_WSBEiJ_T0005512.1 MGP_WSBEiJ_G0004642.1 mouse_genomes_project X 68253119 68264233 - Gm26726 antisense antisense MGP_WSBEiJ_T0010985.1 MGP_WSBEiJ_G0009142.1 mouse_genomes_project X 62818592 62818667 - Mir509 miRNA miRNA MGP_WSBEiJ_T0100169.1 MGP_WSBEiJ_G0038743.1 mouse_genomes_project X 5161305 5163245 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100170.1 MGP_WSBEiJ_G0038743.1 mouse_genomes_project X 5162642 5163140 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0095156.1 MGP_WSBEiJ_G0034948.1 mouse_genomes_project X 69271985 69276007 - MGP_WSBEiJ_P0095156 Slc10a3 protein_coding protein_coding MGP_WSBEiJ_T0095157.1 MGP_WSBEiJ_G0034948.1 mouse_genomes_project X 69271987 69273777 - MGP_WSBEiJ_P0095157 Slc10a3 protein_coding protein_coding MGP_WSBEiJ_T0095158.1 MGP_WSBEiJ_G0034948.1 mouse_genomes_project X 69271987 69276066 - MGP_WSBEiJ_P0095158 Slc10a3 protein_coding protein_coding MGP_WSBEiJ_T0095159.1 MGP_WSBEiJ_G0034948.1 mouse_genomes_project X 69271987 69276110 - MGP_WSBEiJ_P0095159 Slc10a3 protein_coding protein_coding MGP_WSBEiJ_T0009274.1 MGP_WSBEiJ_G0007448.1 mouse_genomes_project X 135349323 135447594 - Gm15046 lincRNA lincRNA MGP_WSBEiJ_T0016317.1 MGP_WSBEiJ_G0014447.1 mouse_genomes_project X 155735896 155736378 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096591.1 MGP_WSBEiJ_G0035353.1 mouse_genomes_project X 160518987 160536029 + MGP_WSBEiJ_P0096591 Fancb protein_coding protein_coding MGP_WSBEiJ_T0096592.1 MGP_WSBEiJ_G0035353.1 mouse_genomes_project X 160518987 160536029 + MGP_WSBEiJ_P0096592 Fancb protein_coding protein_coding MGP_WSBEiJ_T0096593.1 MGP_WSBEiJ_G0035353.1 mouse_genomes_project X 160519107 160536032 + MGP_WSBEiJ_P0096593 Fancb protein_coding protein_coding MGP_WSBEiJ_T0015842.1 MGP_WSBEiJ_G0013972.1 mouse_genomes_project X 57239183 57239905 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096012.1 MGP_WSBEiJ_G0035207.1 mouse_genomes_project X 131921665 131939633 + MGP_WSBEiJ_P0096012 Plp1 protein_coding protein_coding MGP_WSBEiJ_T0096013.1 MGP_WSBEiJ_G0035207.1 mouse_genomes_project X 131921784 131937710 + MGP_WSBEiJ_P0096013 Plp1 protein_coding protein_coding MGP_WSBEiJ_T0096014.1 MGP_WSBEiJ_G0035207.1 mouse_genomes_project X 131931368 131932799 + Plp1 protein_coding retained_intron MGP_WSBEiJ_T0096015.1 MGP_WSBEiJ_G0035207.1 mouse_genomes_project X 131933457 131934679 + Plp1 protein_coding retained_intron MGP_WSBEiJ_T0016083.1 MGP_WSBEiJ_G0014213.1 mouse_genomes_project X 104142556 104143368 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099903.1 MGP_WSBEiJ_G0038566.1 mouse_genomes_project X 31789251 31789382 - Snora69 snoRNA snoRNA MGP_WSBEiJ_T0016236.1 MGP_WSBEiJ_G0014366.1 mouse_genomes_project X 137829811 137829980 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095827.1 MGP_WSBEiJ_G0035142.1 mouse_genomes_project X 111237333 111237680 + MGP_WSBEiJ_P0095827 protein_coding protein_coding MGP_WSBEiJ_T0016005.1 MGP_WSBEiJ_G0014135.1 mouse_genomes_project X 91804317 91806682 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094679.1 MGP_WSBEiJ_G0034831.1 mouse_genomes_project X 48038382 48063204 - MGP_WSBEiJ_P0094679 Mospd1 protein_coding protein_coding MGP_WSBEiJ_T0094680.1 MGP_WSBEiJ_G0034831.1 mouse_genomes_project X 48038382 48063222 - MGP_WSBEiJ_P0094680 Mospd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009253.1 MGP_WSBEiJ_G0007438.1 mouse_genomes_project X 98552055 98564923 + Jpx lincRNA lincRNA MGP_WSBEiJ_T0009254.1 MGP_WSBEiJ_G0007438.1 mouse_genomes_project X 98552058 98553102 + Jpx lincRNA lincRNA MGP_WSBEiJ_T0009255.1 MGP_WSBEiJ_G0007438.1 mouse_genomes_project X 98552251 98561715 + Jpx lincRNA lincRNA MGP_WSBEiJ_T0009256.1 MGP_WSBEiJ_G0007438.1 mouse_genomes_project X 98552276 98561436 + Jpx lincRNA lincRNA MGP_WSBEiJ_T0016304.1 MGP_WSBEiJ_G0014434.1 mouse_genomes_project X 153595461 153596545 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015764.1 MGP_WSBEiJ_G0013894.1 mouse_genomes_project X 38496664 38497299 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016247.1 MGP_WSBEiJ_G0014377.1 mouse_genomes_project X 139769364 139770491 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016347.1 MGP_WSBEiJ_G0014477.1 mouse_genomes_project X 162913713 162914256 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094895.1 MGP_WSBEiJ_G0034913.1 mouse_genomes_project X 68291673 68316345 - MGP_WSBEiJ_P0094895 Haus7 protein_coding protein_coding MGP_WSBEiJ_T0094896.1 MGP_WSBEiJ_G0034913.1 mouse_genomes_project X 68291673 68316345 - MGP_WSBEiJ_P0094896 Haus7 protein_coding protein_coding MGP_WSBEiJ_T0094897.1 MGP_WSBEiJ_G0034913.1 mouse_genomes_project X 68291675 68304233 - Haus7 protein_coding processed_transcript MGP_WSBEiJ_T0015700.1 MGP_WSBEiJ_G0013830.1 mouse_genomes_project X 12011395 12013728 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005518.1 MGP_WSBEiJ_G0004648.1 mouse_genomes_project X 90409885 90500614 + antisense antisense MGP_WSBEiJ_T0011586.1 MGP_WSBEiJ_G0009743.1 mouse_genomes_project X 158573503 158573759 - Gm23501 misc_RNA misc_RNA MGP_WSBEiJ_T0099946.1 MGP_WSBEiJ_G0038609.1 mouse_genomes_project X 146877086 146877192 - Gm24460 snoRNA snoRNA MGP_WSBEiJ_T0016030.1 MGP_WSBEiJ_G0014160.1 mouse_genomes_project X 97117899 97118363 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016271.1 MGP_WSBEiJ_G0014401.1 mouse_genomes_project X 146499673 146500033 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016003.1 MGP_WSBEiJ_G0014133.1 mouse_genomes_project X 91300908 91301984 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015899.1 MGP_WSBEiJ_G0014029.1 mouse_genomes_project X 71282063 71282835 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095273.1 MGP_WSBEiJ_G0034981.1 mouse_genomes_project X 73076902 73082417 + MGP_WSBEiJ_P0095273 Gm14743 protein_coding protein_coding MGP_WSBEiJ_T0015912.1 MGP_WSBEiJ_G0014042.1 mouse_genomes_project X 73490144 73490618 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096623.1 MGP_WSBEiJ_G0035363.1 mouse_genomes_project X 162683491 162685711 - MGP_WSBEiJ_P0096623 Tmsb4x protein_coding protein_coding MGP_WSBEiJ_T0096624.1 MGP_WSBEiJ_G0035363.1 mouse_genomes_project X 162683493 162685545 - MGP_WSBEiJ_P0096624 Tmsb4x protein_coding protein_coding MGP_WSBEiJ_T0096625.1 MGP_WSBEiJ_G0035363.1 mouse_genomes_project X 162683690 162685223 - MGP_WSBEiJ_P0096625 Tmsb4x protein_coding protein_coding MGP_WSBEiJ_T0094681.1 MGP_WSBEiJ_G0034832.1 mouse_genomes_project X 48129902 48139374 + MGP_WSBEiJ_P0094681 Etd protein_coding protein_coding MGP_WSBEiJ_T0016262.1 MGP_WSBEiJ_G0014392.1 mouse_genomes_project X 141843024 141843965 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098650.1 MGP_WSBEiJ_G0037313.1 mouse_genomes_project X 9123502 9123693 - Gm25202 snRNA snRNA MGP_WSBEiJ_T0099944.1 MGP_WSBEiJ_G0038607.1 mouse_genomes_project X 142663315 142663444 - Gm25107 snoRNA snoRNA MGP_WSBEiJ_T0095728.1 MGP_WSBEiJ_G0035108.1 mouse_genomes_project X 101747296 101777936 - MGP_WSBEiJ_P0095728 Cysltr1 protein_coding protein_coding MGP_WSBEiJ_T0095729.1 MGP_WSBEiJ_G0035108.1 mouse_genomes_project X 101750728 101753770 - MGP_WSBEiJ_P0095729 Cysltr1 protein_coding protein_coding MGP_WSBEiJ_T0018000.1 MGP_WSBEiJ_G0015189.1 mouse_genomes_project X 7580411 7638955 + Gm14634 processed_transcript processed_transcript MGP_WSBEiJ_T0018001.1 MGP_WSBEiJ_G0015189.1 mouse_genomes_project X 7580676 7635488 + Gm14634 processed_transcript processed_transcript MGP_WSBEiJ_T0011005.1 MGP_WSBEiJ_G0009162.1 mouse_genomes_project X 98633712 98633788 - Mir421 miRNA miRNA MGP_WSBEiJ_T0097157.1 MGP_WSBEiJ_G0035838.1 mouse_genomes_project X 159667025 159667146 + n-R5s18 rRNA rRNA MGP_WSBEiJ_T0009273.1 MGP_WSBEiJ_G0007447.1 mouse_genomes_project X 128648020 128668043 + Gm26851 lincRNA lincRNA MGP_WSBEiJ_T0015741.1 MGP_WSBEiJ_G0013871.1 mouse_genomes_project X 33916251 33916572 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096140.1 MGP_WSBEiJ_G0035251.1 mouse_genomes_project X 137504093 137505636 - MGP_WSBEiJ_P0096140 Kcne1l protein_coding protein_coding MGP_WSBEiJ_T0016253.1 MGP_WSBEiJ_G0014383.1 mouse_genomes_project X 140949433 140949891 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015838.1 MGP_WSBEiJ_G0013968.1 mouse_genomes_project X 56882788 56883778 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015831.1 MGP_WSBEiJ_G0013961.1 mouse_genomes_project X 55982359 55983512 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096331.1 MGP_WSBEiJ_G0035284.1 mouse_genomes_project X 147480875 147565409 + MGP_WSBEiJ_P0096331 Iqsec2 protein_coding protein_coding MGP_WSBEiJ_T0096332.1 MGP_WSBEiJ_G0035284.1 mouse_genomes_project X 147480879 147565410 + MGP_WSBEiJ_P0096332 Iqsec2 protein_coding protein_coding MGP_WSBEiJ_T0096333.1 MGP_WSBEiJ_G0035284.1 mouse_genomes_project X 147480922 147533881 + MGP_WSBEiJ_P0096333 Iqsec2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096334.1 MGP_WSBEiJ_G0035284.1 mouse_genomes_project X 147515955 147543292 + Iqsec2 protein_coding processed_transcript MGP_WSBEiJ_T0096335.1 MGP_WSBEiJ_G0035284.1 mouse_genomes_project X 147515955 147533870 + Iqsec2 protein_coding processed_transcript MGP_WSBEiJ_T0096336.1 MGP_WSBEiJ_G0035284.1 mouse_genomes_project X 147515955 147533870 + Iqsec2 protein_coding processed_transcript MGP_WSBEiJ_T0096337.1 MGP_WSBEiJ_G0035284.1 mouse_genomes_project X 147542298 147564061 + MGP_WSBEiJ_P0096337 Iqsec2 protein_coding protein_coding MGP_WSBEiJ_T0005502.1 MGP_WSBEiJ_G0004634.1 mouse_genomes_project X 47227445 47271310 + A630012P03Rik antisense antisense MGP_WSBEiJ_T0005503.1 MGP_WSBEiJ_G0004634.1 mouse_genomes_project X 47227445 47271310 + A630012P03Rik antisense antisense MGP_WSBEiJ_T0015855.1 MGP_WSBEiJ_G0013985.1 mouse_genomes_project X 60934059 60934364 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009223.1 MGP_WSBEiJ_G0007415.1 mouse_genomes_project X 31508745 31511144 - Mdrl lincRNA lincRNA MGP_WSBEiJ_T0016090.1 MGP_WSBEiJ_G0014220.1 mouse_genomes_project X 106667850 106670598 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099935.1 MGP_WSBEiJ_G0038598.1 mouse_genomes_project X 124153900 124154032 - Gm26029 snoRNA snoRNA MGP_WSBEiJ_T0018055.1 MGP_WSBEiJ_G0015205.1 mouse_genomes_project X 103979827 104032506 + processed_transcript processed_transcript MGP_WSBEiJ_T0018056.1 MGP_WSBEiJ_G0015205.1 mouse_genomes_project X 103979851 104032300 + processed_transcript processed_transcript MGP_WSBEiJ_T0018057.1 MGP_WSBEiJ_G0015205.1 mouse_genomes_project X 103979927 104111910 + processed_transcript processed_transcript MGP_WSBEiJ_T0018058.1 MGP_WSBEiJ_G0015205.1 mouse_genomes_project X 103980006 104032293 + processed_transcript processed_transcript MGP_WSBEiJ_T0018059.1 MGP_WSBEiJ_G0015205.1 mouse_genomes_project X 103980013 103984842 + processed_transcript retained_intron MGP_WSBEiJ_T0018060.1 MGP_WSBEiJ_G0015205.1 mouse_genomes_project X 103980028 104020640 + processed_transcript processed_transcript MGP_WSBEiJ_T0018061.1 MGP_WSBEiJ_G0015205.1 mouse_genomes_project X 103980044 104020844 + processed_transcript processed_transcript MGP_WSBEiJ_T0018062.1 MGP_WSBEiJ_G0015205.1 mouse_genomes_project X 104049174 104112434 + processed_transcript processed_transcript MGP_WSBEiJ_T0094361.1 MGP_WSBEiJ_G0034717.1 mouse_genomes_project X 15712888 15751518 - MGP_WSBEiJ_P0094361 Zfp182 protein_coding protein_coding MGP_WSBEiJ_T0094362.1 MGP_WSBEiJ_G0034717.1 mouse_genomes_project X 15712892 15751567 - MGP_WSBEiJ_P0094362 Zfp182 protein_coding protein_coding MGP_WSBEiJ_T0094363.1 MGP_WSBEiJ_G0034717.1 mouse_genomes_project X 15713538 15751501 - MGP_WSBEiJ_P0094363 Zfp182 protein_coding protein_coding MGP_WSBEiJ_T0094364.1 MGP_WSBEiJ_G0034717.1 mouse_genomes_project X 15715538 15751834 - Zfp182 protein_coding processed_transcript MGP_WSBEiJ_T0094365.1 MGP_WSBEiJ_G0034717.1 mouse_genomes_project X 15747157 15751558 - Zfp182 protein_coding processed_transcript MGP_WSBEiJ_T0094176.1 MGP_WSBEiJ_G0034653.1 mouse_genomes_project X 2975575 3446587 + MGP_WSBEiJ_P0094176 protein_coding protein_coding MGP_WSBEiJ_T0096431.1 MGP_WSBEiJ_G0035316.1 mouse_genomes_project X 154613920 154770313 + MGP_WSBEiJ_P0096431 Rps6ka3 protein_coding protein_coding MGP_WSBEiJ_T0096432.1 MGP_WSBEiJ_G0035316.1 mouse_genomes_project X 154662187 154733916 + MGP_WSBEiJ_P0096432 Rps6ka3 protein_coding protein_coding MGP_WSBEiJ_T0096433.1 MGP_WSBEiJ_G0035316.1 mouse_genomes_project X 154662187 154774055 + MGP_WSBEiJ_P0096433 Rps6ka3 protein_coding protein_coding MGP_WSBEiJ_T0096434.1 MGP_WSBEiJ_G0035316.1 mouse_genomes_project X 154662313 154734006 + MGP_WSBEiJ_P0096434 Rps6ka3 protein_coding protein_coding MGP_WSBEiJ_T0096435.1 MGP_WSBEiJ_G0035316.1 mouse_genomes_project X 154682490 154732414 + MGP_WSBEiJ_P0096435 Rps6ka3 protein_coding protein_coding MGP_WSBEiJ_T0096436.1 MGP_WSBEiJ_G0035316.1 mouse_genomes_project X 154708284 154736419 + MGP_WSBEiJ_P0096436 Rps6ka3 protein_coding protein_coding MGP_WSBEiJ_T0096437.1 MGP_WSBEiJ_G0035316.1 mouse_genomes_project X 154768131 154769316 + Rps6ka3 protein_coding processed_transcript MGP_WSBEiJ_T0096438.1 MGP_WSBEiJ_G0035316.1 mouse_genomes_project X 154768216 154769551 + Rps6ka3 protein_coding retained_intron MGP_WSBEiJ_T0015722.1 MGP_WSBEiJ_G0013852.1 mouse_genomes_project X 17004629 17005104 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095822.1 MGP_WSBEiJ_G0035139.1 mouse_genomes_project X 109571348 109652281 + MGP_WSBEiJ_P0095822 Klhl4 protein_coding protein_coding MGP_WSBEiJ_T0095823.1 MGP_WSBEiJ_G0035139.1 mouse_genomes_project X 109571348 109652281 + MGP_WSBEiJ_P0095823 Klhl4 protein_coding protein_coding MGP_WSBEiJ_T0095824.1 MGP_WSBEiJ_G0035139.1 mouse_genomes_project X 109571619 109651960 + MGP_WSBEiJ_P0095824 Klhl4 protein_coding protein_coding MGP_WSBEiJ_T0095776.1 MGP_WSBEiJ_G0035125.1 mouse_genomes_project X 105927216 105930140 + MGP_WSBEiJ_P0095776 Pou3f4 protein_coding protein_coding MGP_WSBEiJ_T0094771.1 MGP_WSBEiJ_G0034865.1 mouse_genomes_project X 55321696 55422931 - MGP_WSBEiJ_P0094771 Gm7073 protein_coding protein_coding MGP_WSBEiJ_T0096631.1 MGP_WSBEiJ_G0035365.1 mouse_genomes_project X 162772177 162799887 - MGP_WSBEiJ_P0096631 Tlr7 protein_coding protein_coding MGP_WSBEiJ_T0096632.1 MGP_WSBEiJ_G0035365.1 mouse_genomes_project X 162772179 162799917 - MGP_WSBEiJ_P0096632 Tlr7 protein_coding protein_coding MGP_WSBEiJ_T0096633.1 MGP_WSBEiJ_G0035365.1 mouse_genomes_project X 162772462 162799856 - MGP_WSBEiJ_P0096633 Tlr7 protein_coding protein_coding MGP_WSBEiJ_T0096634.1 MGP_WSBEiJ_G0035365.1 mouse_genomes_project X 162775590 162799850 - MGP_WSBEiJ_P0096634 Tlr7 protein_coding protein_coding MGP_WSBEiJ_T0096635.1 MGP_WSBEiJ_G0035365.1 mouse_genomes_project X 162775604 162799869 - MGP_WSBEiJ_P0096635 Tlr7 protein_coding protein_coding MGP_WSBEiJ_T0096636.1 MGP_WSBEiJ_G0035365.1 mouse_genomes_project X 162786115 162799802 - Tlr7 protein_coding processed_transcript MGP_WSBEiJ_T0017993.1 MGP_WSBEiJ_G0015185.1 mouse_genomes_project X 2006321 2015762 - 2010204K13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017994.1 MGP_WSBEiJ_G0015185.1 mouse_genomes_project X 2006591 2007330 - 2010204K13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017995.1 MGP_WSBEiJ_G0015185.1 mouse_genomes_project X 2006607 2017640 - 2010204K13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017996.1 MGP_WSBEiJ_G0015185.1 mouse_genomes_project X 2006610 2039417 - 2010204K13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0015853.1 MGP_WSBEiJ_G0013983.1 mouse_genomes_project X 59982474 59982724 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094189.1 MGP_WSBEiJ_G0034664.1 mouse_genomes_project X 3597704 3600289 + MGP_WSBEiJ_P0094189 B630019K06Rik protein_coding protein_coding MGP_WSBEiJ_T0095791.1 MGP_WSBEiJ_G0035129.1 mouse_genomes_project X 106668680 106776383 - MGP_WSBEiJ_P0095791 Hdx protein_coding protein_coding MGP_WSBEiJ_T0094884.1 MGP_WSBEiJ_G0034906.1 mouse_genomes_project X 67873906 67877040 - MGP_WSBEiJ_P0094884 Pnma5 protein_coding protein_coding MGP_WSBEiJ_T0094885.1 MGP_WSBEiJ_G0034906.1 mouse_genomes_project X 67873913 67876040 - MGP_WSBEiJ_P0094885 Pnma5 protein_coding protein_coding MGP_WSBEiJ_T0094886.1 MGP_WSBEiJ_G0034906.1 mouse_genomes_project X 67874244 67877040 - MGP_WSBEiJ_P0094886 Pnma5 protein_coding protein_coding MGP_WSBEiJ_T0016087.1 MGP_WSBEiJ_G0014217.1 mouse_genomes_project X 105643217 105644361 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015985.1 MGP_WSBEiJ_G0014115.1 mouse_genomes_project X 89229181 89230034 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094391.1 MGP_WSBEiJ_G0034729.1 mouse_genomes_project X 30556251 30745623 + MGP_WSBEiJ_P0094391 Dock11 protein_coding protein_coding MGP_WSBEiJ_T0094392.1 MGP_WSBEiJ_G0034729.1 mouse_genomes_project X 30613699 30745617 + MGP_WSBEiJ_P0094392 Dock11 protein_coding protein_coding MGP_WSBEiJ_T0094393.1 MGP_WSBEiJ_G0034729.1 mouse_genomes_project X 30641689 30650655 + Dock11 protein_coding retained_intron MGP_WSBEiJ_T0094394.1 MGP_WSBEiJ_G0034729.1 mouse_genomes_project X 30679651 30685855 + Dock11 protein_coding retained_intron MGP_WSBEiJ_T0094395.1 MGP_WSBEiJ_G0034729.1 mouse_genomes_project X 30710332 30745288 + MGP_WSBEiJ_P0094395 Dock11 protein_coding protein_coding MGP_WSBEiJ_T0010966.1 MGP_WSBEiJ_G0009123.1 mouse_genomes_project X 56039457 56039548 + Gm24396 miRNA miRNA MGP_WSBEiJ_T0096506.1 MGP_WSBEiJ_G0035332.1 mouse_genomes_project X 157896532 158049122 - MGP_WSBEiJ_P0096506 Reps2 protein_coding protein_coding MGP_WSBEiJ_T0096507.1 MGP_WSBEiJ_G0035332.1 mouse_genomes_project X 157896532 158129755 - MGP_WSBEiJ_P0096507 Reps2 protein_coding protein_coding MGP_WSBEiJ_T0096508.1 MGP_WSBEiJ_G0035332.1 mouse_genomes_project X 157896532 158129803 - MGP_WSBEiJ_P0096508 Reps2 protein_coding protein_coding MGP_WSBEiJ_T0096509.1 MGP_WSBEiJ_G0035332.1 mouse_genomes_project X 158010791 158049220 - Reps2 protein_coding processed_transcript MGP_WSBEiJ_T0096510.1 MGP_WSBEiJ_G0035332.1 mouse_genomes_project X 158029200 158035780 - Reps2 protein_coding retained_intron MGP_WSBEiJ_T0094890.1 MGP_WSBEiJ_G0034910.1 mouse_genomes_project X 68195640 68212107 + MGP_WSBEiJ_P0094890 Zfp275 protein_coding protein_coding MGP_WSBEiJ_T0094891.1 MGP_WSBEiJ_G0034910.1 mouse_genomes_project X 68197477 68204856 + Zfp275 protein_coding retained_intron MGP_WSBEiJ_T0095524.1 MGP_WSBEiJ_G0035053.1 mouse_genomes_project X 95734890 95951861 - MGP_WSBEiJ_P0095524 Tex11 protein_coding protein_coding MGP_WSBEiJ_T0095525.1 MGP_WSBEiJ_G0035053.1 mouse_genomes_project X 95734890 95951889 - MGP_WSBEiJ_P0095525 Tex11 protein_coding protein_coding MGP_WSBEiJ_T0095526.1 MGP_WSBEiJ_G0035053.1 mouse_genomes_project X 95767964 95951889 - MGP_WSBEiJ_P0095526 Tex11 protein_coding protein_coding MGP_WSBEiJ_T0095494.1 MGP_WSBEiJ_G0035046.1 mouse_genomes_project X 95461194 95467167 + MGP_WSBEiJ_P0095494 Awat1 protein_coding protein_coding MGP_WSBEiJ_T0095732.1 MGP_WSBEiJ_G0035110.1 mouse_genomes_project X 101989611 101993175 - MGP_WSBEiJ_P0095732 Zcchc5 protein_coding protein_coding MGP_WSBEiJ_T0015826.1 MGP_WSBEiJ_G0013956.1 mouse_genomes_project X 55586537 55587331 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098723.1 MGP_WSBEiJ_G0037386.1 mouse_genomes_project X 164055542 164055654 - Gm23197 snRNA snRNA MGP_WSBEiJ_T0016192.1 MGP_WSBEiJ_G0014322.1 mouse_genomes_project X 131997687 131998145 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098708.1 MGP_WSBEiJ_G0037371.1 mouse_genomes_project X 140870839 140870937 - Gm27659 snRNA snRNA MGP_WSBEiJ_T0097140.1 MGP_WSBEiJ_G0035821.1 mouse_genomes_project X 16423386 16423465 + Gm25553 rRNA rRNA MGP_WSBEiJ_T0094378.1 MGP_WSBEiJ_G0034725.1 mouse_genomes_project X 17898418 17965520 - MGP_WSBEiJ_P0094378 Klhl13 protein_coding protein_coding MGP_WSBEiJ_T0094379.1 MGP_WSBEiJ_G0034725.1 mouse_genomes_project X 17898426 17966430 - MGP_WSBEiJ_P0094379 Klhl13 protein_coding protein_coding MGP_WSBEiJ_T0094380.1 MGP_WSBEiJ_G0034725.1 mouse_genomes_project X 17898427 17999592 - MGP_WSBEiJ_P0094380 Klhl13 protein_coding protein_coding MGP_WSBEiJ_T0094381.1 MGP_WSBEiJ_G0034725.1 mouse_genomes_project X 17898427 17946841 - MGP_WSBEiJ_P0094381 Klhl13 protein_coding protein_coding MGP_WSBEiJ_T0094382.1 MGP_WSBEiJ_G0034725.1 mouse_genomes_project X 17913835 17977153 - Klhl13 protein_coding processed_transcript MGP_WSBEiJ_T0016224.1 MGP_WSBEiJ_G0014354.1 mouse_genomes_project X 137085769 137086040 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016233.1 MGP_WSBEiJ_G0014363.1 mouse_genomes_project X 137626346 137626556 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094785.1 MGP_WSBEiJ_G0034875.1 mouse_genomes_project X 61219981 61220845 - MGP_WSBEiJ_P0094785 4930447F04Rik protein_coding protein_coding MGP_WSBEiJ_T0094615.1 MGP_WSBEiJ_G0034806.1 mouse_genomes_project X 43400767 43412991 + MGP_WSBEiJ_P0094615 Rbmx2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094616.1 MGP_WSBEiJ_G0034806.1 mouse_genomes_project X 43400767 43412182 + MGP_WSBEiJ_P0094616 Rbmx2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094617.1 MGP_WSBEiJ_G0034806.1 mouse_genomes_project X 43408803 43411435 + Rbmx2 protein_coding processed_transcript MGP_WSBEiJ_T0015868.1 MGP_WSBEiJ_G0013998.1 mouse_genomes_project X 63297405 63298411 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101172.1 MGP_WSBEiJ_G0039629.1 mouse_genomes_project X 154508678 154512109 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094442.1 MGP_WSBEiJ_G0034747.1 mouse_genomes_project X 31862523 31880576 - MGP_WSBEiJ_P0094442 Akap14 protein_coding protein_coding MGP_WSBEiJ_T0015794.1 MGP_WSBEiJ_G0013924.1 mouse_genomes_project X 46475230 46475763 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015691.1 MGP_WSBEiJ_G0013821.1 mouse_genomes_project X 8755944 8758171 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096122.1 MGP_WSBEiJ_G0035243.1 mouse_genomes_project X 136155460 136191415 + protein_coding processed_transcript MGP_WSBEiJ_T0096123.1 MGP_WSBEiJ_G0035243.1 mouse_genomes_project X 136155472 136194818 + MGP_WSBEiJ_P0096123 protein_coding unknown_likely_coding MGP_WSBEiJ_T0098702.1 MGP_WSBEiJ_G0037365.1 mouse_genomes_project X 123703852 123703960 + Gm24522 snRNA snRNA MGP_WSBEiJ_T0011020.1 MGP_WSBEiJ_G0009177.1 mouse_genomes_project X 135482836 135482901 + Mir3475 miRNA miRNA MGP_WSBEiJ_T0094552.1 MGP_WSBEiJ_G0034789.1 mouse_genomes_project X 39428701 39432329 - MGP_WSBEiJ_P0094552 Dcaf12l1 protein_coding protein_coding MGP_WSBEiJ_T0094553.1 MGP_WSBEiJ_G0034789.1 mouse_genomes_project X 39428701 39432293 - MGP_WSBEiJ_P0094553 Dcaf12l1 protein_coding protein_coding MGP_WSBEiJ_T0016280.1 MGP_WSBEiJ_G0014410.1 mouse_genomes_project X 148783101 148784082 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015918.1 MGP_WSBEiJ_G0014048.1 mouse_genomes_project X 74807991 74808693 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098699.1 MGP_WSBEiJ_G0037362.1 mouse_genomes_project X 116892107 116892207 + Gm24783 snRNA snRNA MGP_WSBEiJ_T0094366.1 MGP_WSBEiJ_G0034718.1 mouse_genomes_project X 15757926 15763312 + MGP_WSBEiJ_P0094366 Spaca5 protein_coding protein_coding MGP_WSBEiJ_T0094587.1 MGP_WSBEiJ_G0034799.1 mouse_genomes_project X 43036689 43058133 + Bcorl1 protein_coding processed_transcript MGP_WSBEiJ_T0094588.1 MGP_WSBEiJ_G0034799.1 mouse_genomes_project X 43038417 43107161 + MGP_WSBEiJ_P0094588 Bcorl1 protein_coding protein_coding MGP_WSBEiJ_T0094589.1 MGP_WSBEiJ_G0034799.1 mouse_genomes_project X 43057246 43075899 + MGP_WSBEiJ_P0094589 Bcorl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094590.1 MGP_WSBEiJ_G0034799.1 mouse_genomes_project X 43064970 43080723 + MGP_WSBEiJ_P0094590 Bcorl1 protein_coding protein_coding MGP_WSBEiJ_T0100173.1 MGP_WSBEiJ_G0038745.1 mouse_genomes_project X 16065951 16070333 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100174.1 MGP_WSBEiJ_G0038745.1 mouse_genomes_project X 16066026 16068109 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0015746.1 MGP_WSBEiJ_G0013876.1 mouse_genomes_project X 34672785 34673456 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015907.1 MGP_WSBEiJ_G0014037.1 mouse_genomes_project X 72551247 72551847 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101153.1 MGP_WSBEiJ_G0039610.1 mouse_genomes_project X 85942075 85942616 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016315.1 MGP_WSBEiJ_G0014445.1 mouse_genomes_project X 155464073 155464571 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016015.1 MGP_WSBEiJ_G0014145.1 mouse_genomes_project X 93830483 93830878 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097179.1 MGP_WSBEiJ_G0035860.1 mouse_genomes_project X 76859132 76859351 + Gm26174 ribozyme ribozyme MGP_WSBEiJ_T0099902.1 MGP_WSBEiJ_G0038565.1 mouse_genomes_project X 31464069 31464156 + Gm23613 snoRNA snoRNA MGP_WSBEiJ_T0095706.1 MGP_WSBEiJ_G0035101.1 mouse_genomes_project X 101087541 101133000 - MGP_WSBEiJ_P0095706 Magt1 protein_coding protein_coding MGP_WSBEiJ_T0095707.1 MGP_WSBEiJ_G0035101.1 mouse_genomes_project X 101087541 101133007 - MGP_WSBEiJ_P0095707 Magt1 protein_coding protein_coding MGP_WSBEiJ_T0095708.1 MGP_WSBEiJ_G0035101.1 mouse_genomes_project X 101089744 101132887 - MGP_WSBEiJ_P0095708 Magt1 protein_coding protein_coding MGP_WSBEiJ_T0095709.1 MGP_WSBEiJ_G0035101.1 mouse_genomes_project X 101096619 101132881 - MGP_WSBEiJ_P0095709 Magt1 protein_coding protein_coding MGP_WSBEiJ_T0094349.1 MGP_WSBEiJ_G0034713.1 mouse_genomes_project X 15554596 15559164 + MGP_WSBEiJ_P0094349 Timp1 protein_coding protein_coding MGP_WSBEiJ_T0094350.1 MGP_WSBEiJ_G0034713.1 mouse_genomes_project X 15554651 15559166 + MGP_WSBEiJ_P0094350 Timp1 protein_coding protein_coding MGP_WSBEiJ_T0095417.1 MGP_WSBEiJ_G0035025.1 mouse_genomes_project X 90866556 90890733 - MGP_WSBEiJ_P0095417 Las1l protein_coding protein_coding MGP_WSBEiJ_T0095418.1 MGP_WSBEiJ_G0035025.1 mouse_genomes_project X 90871907 90890706 - Las1l protein_coding retained_intron MGP_WSBEiJ_T0095419.1 MGP_WSBEiJ_G0035025.1 mouse_genomes_project X 90872040 90880740 - Las1l protein_coding processed_transcript MGP_WSBEiJ_T0095420.1 MGP_WSBEiJ_G0035025.1 mouse_genomes_project X 90879706 90881492 - Las1l protein_coding processed_transcript MGP_WSBEiJ_T0095421.1 MGP_WSBEiJ_G0035025.1 mouse_genomes_project X 90880221 90884343 - Las1l protein_coding processed_transcript MGP_WSBEiJ_T0095422.1 MGP_WSBEiJ_G0035025.1 mouse_genomes_project X 90882719 90890782 - Las1l protein_coding retained_intron MGP_WSBEiJ_T0016088.1 MGP_WSBEiJ_G0014218.1 mouse_genomes_project X 105710366 105713000 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094551.1 MGP_WSBEiJ_G0034788.1 mouse_genomes_project X 39026345 39029229 - MGP_WSBEiJ_P0094551 Dcaf12l2 protein_coding protein_coding MGP_WSBEiJ_T0094813.1 MGP_WSBEiJ_G0034885.1 mouse_genomes_project X 65228980 65246407 - MGP_WSBEiJ_P0094813 Tmem185a protein_coding protein_coding MGP_WSBEiJ_T0094814.1 MGP_WSBEiJ_G0034885.1 mouse_genomes_project X 65230186 65246407 - MGP_WSBEiJ_P0094814 Tmem185a protein_coding protein_coding MGP_WSBEiJ_T0094815.1 MGP_WSBEiJ_G0034885.1 mouse_genomes_project X 65230281 65239397 - Tmem185a protein_coding processed_transcript MGP_WSBEiJ_T0094816.1 MGP_WSBEiJ_G0034885.1 mouse_genomes_project X 65232150 65246369 - Tmem185a protein_coding processed_transcript MGP_WSBEiJ_T0011555.1 MGP_WSBEiJ_G0009712.1 mouse_genomes_project X 44655445 44655740 + Gm23385 misc_RNA misc_RNA MGP_WSBEiJ_T0095272.1 MGP_WSBEiJ_G0034980.1 mouse_genomes_project X 73076862 73082415 + MGP_WSBEiJ_P0095272 protein_coding protein_coding MGP_WSBEiJ_T0016329.1 MGP_WSBEiJ_G0014459.1 mouse_genomes_project X 158351081 158351523 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094269.1 MGP_WSBEiJ_G0034689.1 mouse_genomes_project X 8451380 8460061 + MGP_WSBEiJ_P0094269 Gpr34 protein_coding protein_coding MGP_WSBEiJ_T0094270.1 MGP_WSBEiJ_G0034689.1 mouse_genomes_project X 8452060 8460063 + MGP_WSBEiJ_P0094270 Gpr34 protein_coding protein_coding MGP_WSBEiJ_T0016266.1 MGP_WSBEiJ_G0014396.1 mouse_genomes_project X 145788284 145790712 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015656.1 MGP_WSBEiJ_G0013786.1 mouse_genomes_project X 2132544 2133107 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094282.1 MGP_WSBEiJ_G0034695.1 mouse_genomes_project X 11642703 11670848 - MGP_WSBEiJ_P0094282 Ndp protein_coding protein_coding MGP_WSBEiJ_T0016203.1 MGP_WSBEiJ_G0014333.1 mouse_genomes_project X 133218212 133218419 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095844.1 MGP_WSBEiJ_G0035150.1 mouse_genomes_project X 121819299 121822696 - MGP_WSBEiJ_P0095844 4932411N23Rik protein_coding protein_coding MGP_WSBEiJ_T0101171.1 MGP_WSBEiJ_G0039628.1 mouse_genomes_project X 149738269 149741902 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094245.1 MGP_WSBEiJ_G0034685.1 mouse_genomes_project X 7903352 7956696 + MGP_WSBEiJ_P0094245 Usp9x protein_coding protein_coding MGP_WSBEiJ_T0094246.1 MGP_WSBEiJ_G0034685.1 mouse_genomes_project X 7903368 7955408 + Usp9x protein_coding retained_intron MGP_WSBEiJ_T0094247.1 MGP_WSBEiJ_G0034685.1 mouse_genomes_project X 7903368 8008120 + MGP_WSBEiJ_P0094247 Usp9x protein_coding protein_coding MGP_WSBEiJ_T0094248.1 MGP_WSBEiJ_G0034685.1 mouse_genomes_project X 7946901 7956480 + MGP_WSBEiJ_P0094248 Usp9x protein_coding protein_coding MGP_WSBEiJ_T0094249.1 MGP_WSBEiJ_G0034685.1 mouse_genomes_project X 7963189 7966591 + Usp9x protein_coding retained_intron MGP_WSBEiJ_T0094250.1 MGP_WSBEiJ_G0034685.1 mouse_genomes_project X 7963456 7967803 + Usp9x protein_coding retained_intron MGP_WSBEiJ_T0094251.1 MGP_WSBEiJ_G0034685.1 mouse_genomes_project X 7995637 8004694 + MGP_WSBEiJ_P0094251 Usp9x protein_coding protein_coding MGP_WSBEiJ_T0094481.1 MGP_WSBEiJ_G0034775.1 mouse_genomes_project X 33102159 33157062 - MGP_WSBEiJ_P0094481 Lamp2 protein_coding protein_coding MGP_WSBEiJ_T0094482.1 MGP_WSBEiJ_G0034775.1 mouse_genomes_project X 33105859 33157062 - MGP_WSBEiJ_P0094482 Lamp2 protein_coding protein_coding MGP_WSBEiJ_T0094483.1 MGP_WSBEiJ_G0034775.1 mouse_genomes_project X 33118865 33157062 - MGP_WSBEiJ_P0094483 Lamp2 protein_coding protein_coding MGP_WSBEiJ_T0094484.1 MGP_WSBEiJ_G0034775.1 mouse_genomes_project X 33129232 33143861 - Lamp2 protein_coding retained_intron MGP_WSBEiJ_T0094485.1 MGP_WSBEiJ_G0034775.1 mouse_genomes_project X 33153506 33157022 - Lamp2 protein_coding processed_transcript MGP_WSBEiJ_T0095146.1 MGP_WSBEiJ_G0034946.1 mouse_genomes_project X 69253698 69256015 - MGP_WSBEiJ_P0095146 Lage3 protein_coding protein_coding MGP_WSBEiJ_T0095147.1 MGP_WSBEiJ_G0034946.1 mouse_genomes_project X 69254583 69256039 - MGP_WSBEiJ_P0095147 Lage3 protein_coding protein_coding MGP_WSBEiJ_T0095148.1 MGP_WSBEiJ_G0034946.1 mouse_genomes_project X 69254584 69255996 - MGP_WSBEiJ_P0095148 Lage3 protein_coding protein_coding MGP_WSBEiJ_T0095442.1 MGP_WSBEiJ_G0035031.1 mouse_genomes_project X 91877420 91878205 - MGP_WSBEiJ_P0095442 1700084M14Rik protein_coding protein_coding MGP_WSBEiJ_T0016290.1 MGP_WSBEiJ_G0014420.1 mouse_genomes_project X 150767835 150769386 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010936.1 MGP_WSBEiJ_G0009093.1 mouse_genomes_project X 15505842 15505920 - Gm24824 miRNA miRNA MGP_WSBEiJ_T0016338.1 MGP_WSBEiJ_G0014468.1 mouse_genomes_project X 161482521 161482909 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094446.1 MGP_WSBEiJ_G0034751.1 mouse_genomes_project X 31930997 31939924 - MGP_WSBEiJ_P0094446 Rhox1 protein_coding protein_coding MGP_WSBEiJ_T0015681.1 MGP_WSBEiJ_G0013811.1 mouse_genomes_project X 6959662 6960012 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015978.1 MGP_WSBEiJ_G0014108.1 mouse_genomes_project X 88521912 88522183 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015687.1 MGP_WSBEiJ_G0013817.1 mouse_genomes_project X 8056696 8057923 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015692.1 MGP_WSBEiJ_G0013822.1 mouse_genomes_project X 9098109 9098975 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096101.1 MGP_WSBEiJ_G0035235.1 mouse_genomes_project X 135229468 135273264 + MGP_WSBEiJ_P0096101 Pih1h3b protein_coding protein_coding MGP_WSBEiJ_T0095849.1 MGP_WSBEiJ_G0035155.1 mouse_genomes_project X 124723965 125160470 + Diaph2 protein_coding retained_intron MGP_WSBEiJ_T0095850.1 MGP_WSBEiJ_G0035155.1 mouse_genomes_project X 124723965 125445793 + MGP_WSBEiJ_P0095850 Diaph2 protein_coding protein_coding MGP_WSBEiJ_T0095851.1 MGP_WSBEiJ_G0035155.1 mouse_genomes_project X 124724019 125307598 + Diaph2 protein_coding retained_intron MGP_WSBEiJ_T0095852.1 MGP_WSBEiJ_G0035155.1 mouse_genomes_project X 124724028 125441191 + MGP_WSBEiJ_P0095852 Diaph2 protein_coding protein_coding MGP_WSBEiJ_T0095853.1 MGP_WSBEiJ_G0035155.1 mouse_genomes_project X 124724047 125307271 + Diaph2 protein_coding retained_intron MGP_WSBEiJ_T0095854.1 MGP_WSBEiJ_G0035155.1 mouse_genomes_project X 124724199 125445796 + MGP_WSBEiJ_P0095854 Diaph2 protein_coding protein_coding MGP_WSBEiJ_T0095855.1 MGP_WSBEiJ_G0035155.1 mouse_genomes_project X 124951338 125021887 + Diaph2 protein_coding processed_transcript MGP_WSBEiJ_T0094461.1 MGP_WSBEiJ_G0034765.1 mouse_genomes_project X 32531480 32535389 - MGP_WSBEiJ_P0094461 Rhox8 protein_coding protein_coding MGP_WSBEiJ_T0016239.1 MGP_WSBEiJ_G0014369.1 mouse_genomes_project X 139350651 139352367 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095879.1 MGP_WSBEiJ_G0035162.1 mouse_genomes_project X 129048388 129076697 - MGP_WSBEiJ_P0095879 Nox1 protein_coding protein_coding MGP_WSBEiJ_T0095880.1 MGP_WSBEiJ_G0035162.1 mouse_genomes_project X 129049018 129076608 - MGP_WSBEiJ_P0095880 Nox1 protein_coding protein_coding MGP_WSBEiJ_T0095881.1 MGP_WSBEiJ_G0035162.1 mouse_genomes_project X 129049110 129076551 - MGP_WSBEiJ_P0095881 Nox1 protein_coding protein_coding MGP_WSBEiJ_T0095882.1 MGP_WSBEiJ_G0035162.1 mouse_genomes_project X 129071847 129192333 - MGP_WSBEiJ_P0095882 Nox1 protein_coding protein_coding MGP_WSBEiJ_T0095883.1 MGP_WSBEiJ_G0035162.1 mouse_genomes_project X 129071847 129102351 - MGP_WSBEiJ_P0095883 Nox1 protein_coding protein_coding MGP_WSBEiJ_T0094498.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36048852 36264760 + Gria3 protein_coding retained_intron MGP_WSBEiJ_T0094499.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36049098 36327540 + MGP_WSBEiJ_P0094499 Gria3 protein_coding protein_coding MGP_WSBEiJ_T0094500.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36049256 36329567 + MGP_WSBEiJ_P0094500 Gria3 protein_coding protein_coding MGP_WSBEiJ_T0094501.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36049352 36327547 + Gria3 protein_coding retained_intron MGP_WSBEiJ_T0094502.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36049390 36329564 + MGP_WSBEiJ_P0094502 Gria3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094503.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36049436 36265215 + Gria3 protein_coding retained_intron MGP_WSBEiJ_T0094504.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36049519 36323467 + MGP_WSBEiJ_P0094504 Gria3 protein_coding protein_coding MGP_WSBEiJ_T0094505.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36050695 36127579 + MGP_WSBEiJ_P0094505 Gria3 protein_coding protein_coding MGP_WSBEiJ_T0094506.1 MGP_WSBEiJ_G0034780.1 mouse_genomes_project X 36261857 36272927 + Gria3 protein_coding retained_intron MGP_WSBEiJ_T0011013.1 MGP_WSBEiJ_G0009170.1 mouse_genomes_project X 108169156 108169226 - Mir361 miRNA miRNA MGP_WSBEiJ_T0015820.1 MGP_WSBEiJ_G0013950.1 mouse_genomes_project X 54062858 54063534 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098709.1 MGP_WSBEiJ_G0037372.1 mouse_genomes_project X 141482301 141482361 - Gm26151 snRNA snRNA MGP_WSBEiJ_T0094718.1 MGP_WSBEiJ_G0034850.1 mouse_genomes_project X 51740519 51852620 + MGP_WSBEiJ_P0094718 protein_coding protein_coding MGP_WSBEiJ_T0094719.1 MGP_WSBEiJ_G0034850.1 mouse_genomes_project X 51742872 51852652 + MGP_WSBEiJ_P0094719 protein_coding protein_coding MGP_WSBEiJ_T0094720.1 MGP_WSBEiJ_G0034850.1 mouse_genomes_project X 51762686 51875976 + MGP_WSBEiJ_P0094720 protein_coding protein_coding MGP_WSBEiJ_T0094721.1 MGP_WSBEiJ_G0034850.1 mouse_genomes_project X 51783480 51784011 + MGP_WSBEiJ_P0094721 protein_coding protein_coding MGP_WSBEiJ_T0094722.1 MGP_WSBEiJ_G0034850.1 mouse_genomes_project X 51835054 51852635 + MGP_WSBEiJ_P0094722 protein_coding protein_coding MGP_WSBEiJ_T0094723.1 MGP_WSBEiJ_G0034850.1 mouse_genomes_project X 51839618 51852642 + MGP_WSBEiJ_P0094723 protein_coding protein_coding MGP_WSBEiJ_T0095774.1 MGP_WSBEiJ_G0035124.1 mouse_genomes_project X 104340527 104342350 + MGP_WSBEiJ_P0095774 Gm6377 protein_coding protein_coding MGP_WSBEiJ_T0095775.1 MGP_WSBEiJ_G0035124.1 mouse_genomes_project X 104340529 104344211 + MGP_WSBEiJ_P0095775 Gm6377 protein_coding protein_coding MGP_WSBEiJ_T0015860.1 MGP_WSBEiJ_G0013990.1 mouse_genomes_project X 61823338 61823863 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094239.1 MGP_WSBEiJ_G0034683.1 mouse_genomes_project X 7468083 7491008 - MGP_WSBEiJ_P0094239 1810030O07Rik protein_coding protein_coding MGP_WSBEiJ_T0016060.1 MGP_WSBEiJ_G0014190.1 mouse_genomes_project X 100408802 100409149 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096285.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146859366 146958304 + MGP_WSBEiJ_P0096285 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096286.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146859366 146967687 + MGP_WSBEiJ_P0096286 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096287.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146859366 146910581 + MGP_WSBEiJ_P0096287 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096288.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146859863 146931826 + MGP_WSBEiJ_P0096288 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096289.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146859875 146958304 + MGP_WSBEiJ_P0096289 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096290.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146859881 146967689 + MGP_WSBEiJ_P0096290 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096291.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146859881 146921428 + MGP_WSBEiJ_P0096291 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096292.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146861053 146889187 + MGP_WSBEiJ_P0096292 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096293.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146892454 146894679 + Phf8 protein_coding retained_intron MGP_WSBEiJ_T0096294.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146905810 146915612 + MGP_WSBEiJ_P0096294 Phf8 protein_coding protein_coding MGP_WSBEiJ_T0096295.1 MGP_WSBEiJ_G0035279.1 mouse_genomes_project X 146963646 146967689 + Phf8 protein_coding retained_intron MGP_WSBEiJ_T0095060.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69112067 69136008 - MGP_WSBEiJ_P0095060 Flna protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095061.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69112067 69140835 - MGP_WSBEiJ_P0095061 Flna protein_coding protein_coding MGP_WSBEiJ_T0095062.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69112069 69136144 - MGP_WSBEiJ_P0095062 Flna protein_coding protein_coding MGP_WSBEiJ_T0095063.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69112147 69136165 - MGP_WSBEiJ_P0095063 Flna protein_coding protein_coding MGP_WSBEiJ_T0095064.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69112395 69135974 - MGP_WSBEiJ_P0095064 Flna protein_coding protein_coding MGP_WSBEiJ_T0095065.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69113416 69115086 - Flna protein_coding processed_transcript MGP_WSBEiJ_T0095066.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69113440 69115396 - Flna protein_coding retained_intron MGP_WSBEiJ_T0095067.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69115054 69116227 - Flna protein_coding retained_intron MGP_WSBEiJ_T0095068.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69115478 69117096 - MGP_WSBEiJ_P0095068 Flna protein_coding protein_coding MGP_WSBEiJ_T0095069.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69115843 69116575 - Flna protein_coding retained_intron MGP_WSBEiJ_T0095070.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69116458 69117670 - MGP_WSBEiJ_P0095070 Flna protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095071.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69116692 69117406 - Flna protein_coding retained_intron MGP_WSBEiJ_T0095072.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69116986 69119177 - MGP_WSBEiJ_P0095072 Flna protein_coding protein_coding MGP_WSBEiJ_T0095073.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69119302 69124571 - Flna protein_coding processed_transcript MGP_WSBEiJ_T0095074.1 MGP_WSBEiJ_G0034937.1 mouse_genomes_project X 69124689 69127530 - Flna protein_coding processed_transcript MGP_WSBEiJ_T0094577.1 MGP_WSBEiJ_G0034797.1 mouse_genomes_project X 42843361 42891417 - MGP_WSBEiJ_P0094577 Zdhhc9 protein_coding protein_coding MGP_WSBEiJ_T0094578.1 MGP_WSBEiJ_G0034797.1 mouse_genomes_project X 42843361 42891226 - MGP_WSBEiJ_P0094578 Zdhhc9 protein_coding protein_coding MGP_WSBEiJ_T0094579.1 MGP_WSBEiJ_G0034797.1 mouse_genomes_project X 42852600 42891204 - Zdhhc9 protein_coding retained_intron MGP_WSBEiJ_T0094580.1 MGP_WSBEiJ_G0034797.1 mouse_genomes_project X 42865151 42891141 - Zdhhc9 protein_coding retained_intron MGP_WSBEiJ_T0094581.1 MGP_WSBEiJ_G0034797.1 mouse_genomes_project X 42884254 42890867 - Zdhhc9 protein_coding processed_transcript MGP_WSBEiJ_T0094582.1 MGP_WSBEiJ_G0034797.1 mouse_genomes_project X 42889206 42891197 - Zdhhc9 protein_coding processed_transcript MGP_WSBEiJ_T0094287.1 MGP_WSBEiJ_G0034698.1 mouse_genomes_project X 12889869 12890714 + MGP_WSBEiJ_P0094287 Dusp21 protein_coding protein_coding MGP_WSBEiJ_T0009276.1 MGP_WSBEiJ_G0007450.1 mouse_genomes_project X 139357671 139370251 + lincRNA lincRNA MGP_WSBEiJ_T0099945.1 MGP_WSBEiJ_G0038608.1 mouse_genomes_project X 146129738 146129866 - Gm24907 snoRNA snoRNA MGP_WSBEiJ_T0015775.1 MGP_WSBEiJ_G0013905.1 mouse_genomes_project X 42064882 42065848 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016036.1 MGP_WSBEiJ_G0014166.1 mouse_genomes_project X 98053312 98053560 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097144.1 MGP_WSBEiJ_G0035825.1 mouse_genomes_project X 71753134 71753242 - Gm26041 rRNA rRNA MGP_WSBEiJ_T0015658.1 MGP_WSBEiJ_G0013788.1 mouse_genomes_project X 2291283 2291687 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015942.1 MGP_WSBEiJ_G0014072.1 mouse_genomes_project X 82449429 82450307 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095257.1 MGP_WSBEiJ_G0034969.1 mouse_genomes_project X 71227089 71230363 + MGP_WSBEiJ_P0095257 protein_coding protein_coding MGP_WSBEiJ_T0096127.1 MGP_WSBEiJ_G0035245.1 mouse_genomes_project X 136695910 136905970 + MGP_WSBEiJ_P0096127 Col4a5 protein_coding protein_coding MGP_WSBEiJ_T0096128.1 MGP_WSBEiJ_G0035245.1 mouse_genomes_project X 136695935 136905916 + MGP_WSBEiJ_P0096128 Col4a5 protein_coding protein_coding MGP_WSBEiJ_T0096129.1 MGP_WSBEiJ_G0035245.1 mouse_genomes_project X 136845363 136905970 + MGP_WSBEiJ_P0096129 Col4a5 protein_coding protein_coding MGP_WSBEiJ_T0096130.1 MGP_WSBEiJ_G0035245.1 mouse_genomes_project X 136873829 136891281 + Col4a5 protein_coding processed_transcript MGP_WSBEiJ_T0096373.1 MGP_WSBEiJ_G0035298.1 mouse_genomes_project X 149109454 149128434 + MGP_WSBEiJ_P0096373 2210013O21Rik protein_coding protein_coding MGP_WSBEiJ_T0096374.1 MGP_WSBEiJ_G0035298.1 mouse_genomes_project X 149109474 149129090 + MGP_WSBEiJ_P0096374 2210013O21Rik protein_coding protein_coding MGP_WSBEiJ_T0096375.1 MGP_WSBEiJ_G0035298.1 mouse_genomes_project X 149109491 149115053 + MGP_WSBEiJ_P0096375 2210013O21Rik protein_coding protein_coding MGP_WSBEiJ_T0096376.1 MGP_WSBEiJ_G0035298.1 mouse_genomes_project X 149109803 149128292 + 2210013O21Rik protein_coding processed_transcript MGP_WSBEiJ_T0015761.1 MGP_WSBEiJ_G0013891.1 mouse_genomes_project X 38157754 38157926 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096595.1 MGP_WSBEiJ_G0035355.1 mouse_genomes_project X 160669804 160873584 - MGP_WSBEiJ_P0096595 Glra2 protein_coding protein_coding MGP_WSBEiJ_T0097136.1 MGP_WSBEiJ_G0035817.1 mouse_genomes_project X 726022 726141 + n-R5s2 rRNA rRNA MGP_WSBEiJ_T0002436.1 MGP_WSBEiJ_G0002352.1 mouse_genomes_project X 123380939 123382801 + TEC TEC MGP_WSBEiJ_T0015830.1 MGP_WSBEiJ_G0013960.1 mouse_genomes_project X 55861671 55862396 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015708.1 MGP_WSBEiJ_G0013838.1 mouse_genomes_project X 14546811 14547029 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097154.1 MGP_WSBEiJ_G0035835.1 mouse_genomes_project X 153075951 153076045 - Gm23381 rRNA rRNA MGP_WSBEiJ_T0016084.1 MGP_WSBEiJ_G0014214.1 mouse_genomes_project X 104260164 104261048 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009249.1 MGP_WSBEiJ_G0007436.1 mouse_genomes_project X 95635528 95643840 + Gm14902 lincRNA lincRNA MGP_WSBEiJ_T0016097.1 MGP_WSBEiJ_G0014227.1 mouse_genomes_project X 107768589 107769497 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095677.1 MGP_WSBEiJ_G0035098.1 mouse_genomes_project X 100234294 100237844 + MGP_WSBEiJ_P0095677 Magee1 protein_coding protein_coding MGP_WSBEiJ_T0016114.1 MGP_WSBEiJ_G0014244.1 mouse_genomes_project X 110329927 110332927 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015844.1 MGP_WSBEiJ_G0013974.1 mouse_genomes_project X 57512742 57513702 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099926.1 MGP_WSBEiJ_G0038589.1 mouse_genomes_project X 96035947 96036067 - Gm24061 snoRNA snoRNA MGP_WSBEiJ_T0095642.1 MGP_WSBEiJ_G0035078.1 mouse_genomes_project X 97656473 97662907 + MGP_WSBEiJ_P0095642 protein_coding protein_coding MGP_WSBEiJ_T0009293.1 MGP_WSBEiJ_G0007458.1 mouse_genomes_project X 162079447 162082888 - Gm15226 lincRNA lincRNA MGP_WSBEiJ_T0018078.1 MGP_WSBEiJ_G0015212.1 mouse_genomes_project X 147713060 147755416 + 3010001F23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018079.1 MGP_WSBEiJ_G0015212.1 mouse_genomes_project X 147713874 147730352 + 3010001F23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0094049.1 MGP_WSBEiJ_G0034628.1 mouse_genomes_project X 2341338 2350972 - MGP_WSBEiJ_P0094049 Ccdc120 protein_coding protein_coding MGP_WSBEiJ_T0094050.1 MGP_WSBEiJ_G0034628.1 mouse_genomes_project X 2347587 2349841 - MGP_WSBEiJ_P0094050 Ccdc120 protein_coding protein_coding MGP_WSBEiJ_T0094051.1 MGP_WSBEiJ_G0034628.1 mouse_genomes_project X 2347844 2350939 - Ccdc120 protein_coding processed_transcript MGP_WSBEiJ_T0094052.1 MGP_WSBEiJ_G0034628.1 mouse_genomes_project X 2347858 2349862 - Ccdc120 protein_coding processed_transcript MGP_WSBEiJ_T0094053.1 MGP_WSBEiJ_G0034628.1 mouse_genomes_project X 2347869 2350955 - Ccdc120 protein_coding processed_transcript MGP_WSBEiJ_T0094054.1 MGP_WSBEiJ_G0034628.1 mouse_genomes_project X 2347996 2349838 - Ccdc120 protein_coding processed_transcript MGP_WSBEiJ_T0094055.1 MGP_WSBEiJ_G0034628.1 mouse_genomes_project X 2348086 2360872 - Ccdc120 protein_coding processed_transcript MGP_WSBEiJ_T0094056.1 MGP_WSBEiJ_G0034628.1 mouse_genomes_project X 2348139 2360864 - Ccdc120 protein_coding processed_transcript MGP_WSBEiJ_T0016170.1 MGP_WSBEiJ_G0014300.1 mouse_genomes_project X 127867375 127868427 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016069.1 MGP_WSBEiJ_G0014199.1 mouse_genomes_project X 101786345 101786638 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010954.1 MGP_WSBEiJ_G0009111.1 mouse_genomes_project X 47395570 47395635 - Mir106a miRNA miRNA MGP_WSBEiJ_T0094470.1 MGP_WSBEiJ_G0034771.1 mouse_genomes_project X 32800412 32810383 + MGP_WSBEiJ_P0094470 Rhox13 protein_coding protein_coding MGP_WSBEiJ_T0015769.1 MGP_WSBEiJ_G0013899.1 mouse_genomes_project X 40033311 40034466 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095541.1 MGP_WSBEiJ_G0035057.1 mouse_genomes_project X 96158750 96161352 - Gm614 protein_coding processed_transcript MGP_WSBEiJ_T0095542.1 MGP_WSBEiJ_G0035057.1 mouse_genomes_project X 96158750 96161369 - MGP_WSBEiJ_P0095542 Gm614 protein_coding protein_coding MGP_WSBEiJ_T0099939.1 MGP_WSBEiJ_G0038602.1 mouse_genomes_project X 132221757 132221872 - Gm25770 snoRNA snoRNA MGP_WSBEiJ_T0016227.1 MGP_WSBEiJ_G0014357.1 mouse_genomes_project X 137194477 137196624 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096637.1 MGP_WSBEiJ_G0035366.1 mouse_genomes_project X 162816951 162853362 - MGP_WSBEiJ_P0096637 Prps2 protein_coding protein_coding MGP_WSBEiJ_T0096638.1 MGP_WSBEiJ_G0035366.1 mouse_genomes_project X 162843020 162853323 - Prps2 protein_coding processed_transcript MGP_WSBEiJ_T0095016.1 MGP_WSBEiJ_G0034931.1 mouse_genomes_project X 68820758 68844859 - MGP_WSBEiJ_P0095016 Hcfc1 protein_coding protein_coding MGP_WSBEiJ_T0095017.1 MGP_WSBEiJ_G0034931.1 mouse_genomes_project X 68820761 68827787 - MGP_WSBEiJ_P0095017 Hcfc1 protein_coding protein_coding MGP_WSBEiJ_T0095018.1 MGP_WSBEiJ_G0034931.1 mouse_genomes_project X 68820763 68844853 - MGP_WSBEiJ_P0095018 Hcfc1 protein_coding protein_coding MGP_WSBEiJ_T0095019.1 MGP_WSBEiJ_G0034931.1 mouse_genomes_project X 68823287 68825398 - Hcfc1 protein_coding retained_intron MGP_WSBEiJ_T0095020.1 MGP_WSBEiJ_G0034931.1 mouse_genomes_project X 68825160 68826312 - Hcfc1 protein_coding processed_transcript MGP_WSBEiJ_T0095021.1 MGP_WSBEiJ_G0034931.1 mouse_genomes_project X 68833646 68835955 - Hcfc1 protein_coding processed_transcript MGP_WSBEiJ_T0016287.1 MGP_WSBEiJ_G0014417.1 mouse_genomes_project X 150610453 150610813 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015671.1 MGP_WSBEiJ_G0013801.1 mouse_genomes_project X 3739290 3739952 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016325.1 MGP_WSBEiJ_G0014455.1 mouse_genomes_project X 158187391 158188033 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095993.1 MGP_WSBEiJ_G0035197.1 mouse_genomes_project X 131271057 131272635 - MGP_WSBEiJ_P0095993 Bex1 protein_coding protein_coding MGP_WSBEiJ_T0095762.1 MGP_WSBEiJ_G0035119.1 mouse_genomes_project X 103127747 103130449 - MGP_WSBEiJ_P0095762 Gm732 protein_coding protein_coding MGP_WSBEiJ_T0095763.1 MGP_WSBEiJ_G0035119.1 mouse_genomes_project X 103128888 103130478 - MGP_WSBEiJ_P0095763 Gm732 protein_coding protein_coding MGP_WSBEiJ_T0095988.1 MGP_WSBEiJ_G0035195.1 mouse_genomes_project X 131189785 131191240 + MGP_WSBEiJ_P0095988 Bex4 protein_coding protein_coding MGP_WSBEiJ_T0015679.1 MGP_WSBEiJ_G0013809.1 mouse_genomes_project X 6680479 6680678 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015815.1 MGP_WSBEiJ_G0013945.1 mouse_genomes_project X 52634131 52634729 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016337.1 MGP_WSBEiJ_G0014467.1 mouse_genomes_project X 161206594 161206973 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016349.1 MGP_WSBEiJ_G0014479.1 mouse_genomes_project X 163471886 163472606 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015787.1 MGP_WSBEiJ_G0013917.1 mouse_genomes_project X 45651904 45652761 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094306.1 MGP_WSBEiJ_G0034704.1 mouse_genomes_project X 15101577 15194221 + MGP_WSBEiJ_P0094306 Jade3 protein_coding protein_coding MGP_WSBEiJ_T0094307.1 MGP_WSBEiJ_G0034704.1 mouse_genomes_project X 15101659 15194227 + MGP_WSBEiJ_P0094307 Jade3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094308.1 MGP_WSBEiJ_G0034704.1 mouse_genomes_project X 15101677 15169024 + Jade3 protein_coding retained_intron MGP_WSBEiJ_T0094309.1 MGP_WSBEiJ_G0034704.1 mouse_genomes_project X 15135644 15192178 + MGP_WSBEiJ_P0094309 Jade3 protein_coding protein_coding MGP_WSBEiJ_T0015915.1 MGP_WSBEiJ_G0014045.1 mouse_genomes_project X 73649843 73650951 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095548.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96172188 96196924 + MGP_WSBEiJ_P0095548 Med12 protein_coding protein_coding MGP_WSBEiJ_T0095549.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96172387 96196924 + MGP_WSBEiJ_P0095549 Med12 protein_coding protein_coding MGP_WSBEiJ_T0095550.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96172418 96196924 + MGP_WSBEiJ_P0095550 Med12 protein_coding protein_coding MGP_WSBEiJ_T0095551.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96172418 96196924 + MGP_WSBEiJ_P0095551 Med12 protein_coding protein_coding MGP_WSBEiJ_T0095552.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96181023 96182485 + Med12 protein_coding retained_intron MGP_WSBEiJ_T0095553.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96181513 96182256 + Med12 protein_coding processed_transcript MGP_WSBEiJ_T0095554.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96184349 96196924 + Med12 protein_coding retained_intron MGP_WSBEiJ_T0095555.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96192592 96195526 + Med12 protein_coding processed_transcript MGP_WSBEiJ_T0095556.1 MGP_WSBEiJ_G0035060.1 mouse_genomes_project X 96196027 96196846 + Med12 protein_coding processed_transcript MGP_WSBEiJ_T0099952.1 MGP_WSBEiJ_G0038615.1 mouse_genomes_project X 158241307 158241428 + Gm23786 snoRNA snoRNA MGP_WSBEiJ_T0015777.1 MGP_WSBEiJ_G0013907.1 mouse_genomes_project X 42268366 42270236 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097147.1 MGP_WSBEiJ_G0035828.1 mouse_genomes_project X 97766934 97767035 + Gm26152 rRNA rRNA MGP_WSBEiJ_T0099938.1 MGP_WSBEiJ_G0038601.1 mouse_genomes_project X 127532085 127532216 - Gm23768 snoRNA snoRNA MGP_WSBEiJ_T0095362.1 MGP_WSBEiJ_G0035012.1 mouse_genomes_project X 88981055 89029511 - MGP_WSBEiJ_P0095362 Zfx protein_coding protein_coding MGP_WSBEiJ_T0095363.1 MGP_WSBEiJ_G0035012.1 mouse_genomes_project X 88987543 89029479 - MGP_WSBEiJ_P0095363 Zfx protein_coding protein_coding MGP_WSBEiJ_T0095364.1 MGP_WSBEiJ_G0035012.1 mouse_genomes_project X 89004208 89029213 - MGP_WSBEiJ_P0095364 Zfx protein_coding protein_coding MGP_WSBEiJ_T0095365.1 MGP_WSBEiJ_G0035012.1 mouse_genomes_project X 89004706 89029786 - Zfx protein_coding processed_transcript MGP_WSBEiJ_T0095366.1 MGP_WSBEiJ_G0035012.1 mouse_genomes_project X 89019948 89029236 - Zfx protein_coding retained_intron MGP_WSBEiJ_T0101158.1 MGP_WSBEiJ_G0039615.1 mouse_genomes_project X 97657230 97734138 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099930.1 MGP_WSBEiJ_G0038593.1 mouse_genomes_project X 111773414 111773529 + Gm24438 snoRNA snoRNA MGP_WSBEiJ_T0094165.1 MGP_WSBEiJ_G0034651.1 mouse_genomes_project X 2879891 2893630 - MGP_WSBEiJ_P0094165 Ftsj1 protein_coding protein_coding MGP_WSBEiJ_T0094166.1 MGP_WSBEiJ_G0034651.1 mouse_genomes_project X 2881619 2893534 - MGP_WSBEiJ_P0094166 Ftsj1 protein_coding protein_coding MGP_WSBEiJ_T0094167.1 MGP_WSBEiJ_G0034651.1 mouse_genomes_project X 2881619 2893619 - MGP_WSBEiJ_P0094167 Ftsj1 protein_coding protein_coding MGP_WSBEiJ_T0094168.1 MGP_WSBEiJ_G0034651.1 mouse_genomes_project X 2885863 2893432 - Ftsj1 protein_coding retained_intron MGP_WSBEiJ_T0094169.1 MGP_WSBEiJ_G0034651.1 mouse_genomes_project X 2886160 2887581 - MGP_WSBEiJ_P0094169 Ftsj1 protein_coding protein_coding MGP_WSBEiJ_T0094170.1 MGP_WSBEiJ_G0034651.1 mouse_genomes_project X 2886191 2887051 - Ftsj1 protein_coding processed_transcript MGP_WSBEiJ_T0094171.1 MGP_WSBEiJ_G0034651.1 mouse_genomes_project X 2889746 2893587 - Ftsj1 protein_coding retained_intron MGP_WSBEiJ_T0010952.1 MGP_WSBEiJ_G0009109.1 mouse_genomes_project X 47395180 47395260 - Mir20b miRNA miRNA MGP_WSBEiJ_T0011566.1 MGP_WSBEiJ_G0009723.1 mouse_genomes_project X 98552055 98552178 + Gm27875 misc_RNA misc_RNA MGP_WSBEiJ_T0016111.1 MGP_WSBEiJ_G0014241.1 mouse_genomes_project X 109864507 109864946 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010940.1 MGP_WSBEiJ_G0009097.1 mouse_genomes_project X 32898237 32898317 + Mir3110 miRNA miRNA MGP_WSBEiJ_T0009271.1 MGP_WSBEiJ_G0007445.1 mouse_genomes_project X 114759097 114761090 - Gm14929 lincRNA lincRNA MGP_WSBEiJ_T0097155.1 MGP_WSBEiJ_G0035836.1 mouse_genomes_project X 154860420 154860529 + Gm23806 rRNA rRNA MGP_WSBEiJ_T0016340.1 MGP_WSBEiJ_G0014470.1 mouse_genomes_project X 161652926 161653322 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016176.1 MGP_WSBEiJ_G0014306.1 mouse_genomes_project X 129531026 129531392 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010927.1 MGP_WSBEiJ_G0009084.1 mouse_genomes_project X 1832900 1832965 - Mir362 miRNA miRNA MGP_WSBEiJ_T0095319.1 MGP_WSBEiJ_G0034993.1 mouse_genomes_project X 80399331 80482668 - MGP_WSBEiJ_P0095319 Gk protein_coding protein_coding MGP_WSBEiJ_T0095320.1 MGP_WSBEiJ_G0034993.1 mouse_genomes_project X 80399331 80482655 - MGP_WSBEiJ_P0095320 Gk protein_coding protein_coding MGP_WSBEiJ_T0095321.1 MGP_WSBEiJ_G0034993.1 mouse_genomes_project X 80399331 80482850 - MGP_WSBEiJ_P0095321 Gk protein_coding protein_coding MGP_WSBEiJ_T0095322.1 MGP_WSBEiJ_G0034993.1 mouse_genomes_project X 80399331 80482684 - MGP_WSBEiJ_P0095322 Gk protein_coding protein_coding MGP_WSBEiJ_T0095323.1 MGP_WSBEiJ_G0034993.1 mouse_genomes_project X 80404356 80411802 - Gk protein_coding processed_transcript MGP_WSBEiJ_T0095324.1 MGP_WSBEiJ_G0034993.1 mouse_genomes_project X 80411721 80413786 - Gk protein_coding retained_intron MGP_WSBEiJ_T0095325.1 MGP_WSBEiJ_G0034993.1 mouse_genomes_project X 80412018 80438889 - Gk protein_coding retained_intron MGP_WSBEiJ_T0095326.1 MGP_WSBEiJ_G0034993.1 mouse_genomes_project X 80464134 80467582 - Gk protein_coding retained_intron MGP_WSBEiJ_T0098704.1 MGP_WSBEiJ_G0037367.1 mouse_genomes_project X 133432083 133432190 - Gm22057 snRNA snRNA MGP_WSBEiJ_T0009291.1 MGP_WSBEiJ_G0007456.1 mouse_genomes_project X 157297258 157299256 - Scml1 lincRNA lincRNA MGP_WSBEiJ_T0018063.1 MGP_WSBEiJ_G0015206.1 mouse_genomes_project X 128856878 128859378 - 4930570D08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0094847.1 MGP_WSBEiJ_G0034891.1 mouse_genomes_project X 66408146 66410473 + MGP_WSBEiJ_P0094847 Hmgb3 protein_coding protein_coding MGP_WSBEiJ_T0094848.1 MGP_WSBEiJ_G0034891.1 mouse_genomes_project X 66408982 66410472 + Hmgb3 protein_coding retained_intron MGP_WSBEiJ_T0094471.1 MGP_WSBEiJ_G0034772.1 mouse_genomes_project X 32877462 32884997 + MGP_WSBEiJ_P0094471 Zbtb33 protein_coding protein_coding MGP_WSBEiJ_T0094472.1 MGP_WSBEiJ_G0034772.1 mouse_genomes_project X 32877481 32882346 + MGP_WSBEiJ_P0094472 Zbtb33 protein_coding protein_coding MGP_WSBEiJ_T0094473.1 MGP_WSBEiJ_G0034772.1 mouse_genomes_project X 32877503 32881730 + MGP_WSBEiJ_P0094473 Zbtb33 protein_coding protein_coding MGP_WSBEiJ_T0095134.1 MGP_WSBEiJ_G0034944.1 mouse_genomes_project X 69214732 69221776 + MGP_WSBEiJ_P0095134 Fam50a protein_coding protein_coding MGP_WSBEiJ_T0095135.1 MGP_WSBEiJ_G0034944.1 mouse_genomes_project X 69214825 69221761 + Fam50a protein_coding retained_intron MGP_WSBEiJ_T0095136.1 MGP_WSBEiJ_G0034944.1 mouse_genomes_project X 69219106 69219604 + Fam50a protein_coding retained_intron MGP_WSBEiJ_T0094271.1 MGP_WSBEiJ_G0034690.1 mouse_genomes_project X 8475785 8483049 + MGP_WSBEiJ_P0094271 Gpr82 protein_coding protein_coding MGP_WSBEiJ_T0101167.1 MGP_WSBEiJ_G0039624.1 mouse_genomes_project X 148481472 148482118 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094906.1 MGP_WSBEiJ_G0034915.1 mouse_genomes_project X 68361271 68415700 + MGP_WSBEiJ_P0094906 Atp2b3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094907.1 MGP_WSBEiJ_G0034915.1 mouse_genomes_project X 68361411 68430162 + MGP_WSBEiJ_P0094907 Atp2b3 protein_coding protein_coding MGP_WSBEiJ_T0094908.1 MGP_WSBEiJ_G0034915.1 mouse_genomes_project X 68361411 68417369 + MGP_WSBEiJ_P0094908 Atp2b3 protein_coding protein_coding MGP_WSBEiJ_T0094909.1 MGP_WSBEiJ_G0034915.1 mouse_genomes_project X 68361411 68430162 + MGP_WSBEiJ_P0094909 Atp2b3 protein_coding protein_coding MGP_WSBEiJ_T0094401.1 MGP_WSBEiJ_G0034732.1 mouse_genomes_project X 31008482 31022733 + Lonrf3 protein_coding retained_intron MGP_WSBEiJ_T0094402.1 MGP_WSBEiJ_G0034732.1 mouse_genomes_project X 31008482 31043548 + MGP_WSBEiJ_P0094402 Lonrf3 protein_coding protein_coding MGP_WSBEiJ_T0094403.1 MGP_WSBEiJ_G0034732.1 mouse_genomes_project X 31009345 31021876 + MGP_WSBEiJ_P0094403 Lonrf3 protein_coding protein_coding MGP_WSBEiJ_T0095644.1 MGP_WSBEiJ_G0035080.1 mouse_genomes_project X 97768709 97775689 + MGP_WSBEiJ_P0095644 protein_coding protein_coding MGP_WSBEiJ_T0095646.1 MGP_WSBEiJ_G0035080.1 mouse_genomes_project X 97769969 97771663 + MGP_WSBEiJ_P0095646 protein_coding protein_coding MGP_WSBEiJ_T0095989.1 MGP_WSBEiJ_G0035196.1 mouse_genomes_project X 131221263 131224560 - MGP_WSBEiJ_P0095989 Tceal8 protein_coding protein_coding MGP_WSBEiJ_T0095990.1 MGP_WSBEiJ_G0035196.1 mouse_genomes_project X 131222360 131224651 - MGP_WSBEiJ_P0095990 Tceal8 protein_coding protein_coding MGP_WSBEiJ_T0095991.1 MGP_WSBEiJ_G0035196.1 mouse_genomes_project X 131223164 131224525 - MGP_WSBEiJ_P0095991 Tceal8 protein_coding protein_coding MGP_WSBEiJ_T0095992.1 MGP_WSBEiJ_G0035196.1 mouse_genomes_project X 131223268 131224510 - MGP_WSBEiJ_P0095992 Tceal8 protein_coding protein_coding MGP_WSBEiJ_T0016057.1 MGP_WSBEiJ_G0014187.1 mouse_genomes_project X 99102693 99102965 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094766.1 MGP_WSBEiJ_G0034864.1 mouse_genomes_project X 55094606 55482112 - MGP_WSBEiJ_P0094766 Atp11c protein_coding protein_coding MGP_WSBEiJ_T0094767.1 MGP_WSBEiJ_G0034864.1 mouse_genomes_project X 55094609 55287599 - MGP_WSBEiJ_P0094767 Atp11c protein_coding protein_coding MGP_WSBEiJ_T0094768.1 MGP_WSBEiJ_G0034864.1 mouse_genomes_project X 55094609 55287599 - MGP_WSBEiJ_P0094768 Atp11c protein_coding protein_coding MGP_WSBEiJ_T0094769.1 MGP_WSBEiJ_G0034864.1 mouse_genomes_project X 55096939 55147254 - Atp11c protein_coding processed_transcript MGP_WSBEiJ_T0094770.1 MGP_WSBEiJ_G0034864.1 mouse_genomes_project X 55114555 55482112 - Atp11c protein_coding processed_transcript MGP_WSBEiJ_T0096349.1 MGP_WSBEiJ_G0035287.1 mouse_genomes_project X 147687682 147712737 - MGP_WSBEiJ_P0096349 Gpr173 protein_coding protein_coding MGP_WSBEiJ_T0096350.1 MGP_WSBEiJ_G0035287.1 mouse_genomes_project X 147711048 147712737 - Gpr173 protein_coding processed_transcript MGP_WSBEiJ_T0016099.1 MGP_WSBEiJ_G0014229.1 mouse_genomes_project X 107867816 107869440 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016312.1 MGP_WSBEiJ_G0014442.1 mouse_genomes_project X 155002588 155002864 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016134.1 MGP_WSBEiJ_G0014264.1 mouse_genomes_project X 114427575 114428313 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095266.1 MGP_WSBEiJ_G0034975.1 mouse_genomes_project X 72715699 72730072 - MGP_WSBEiJ_P0095266 Pbsn protein_coding protein_coding MGP_WSBEiJ_T0095267.1 MGP_WSBEiJ_G0034975.1 mouse_genomes_project X 72715700 72729979 - MGP_WSBEiJ_P0095267 Pbsn protein_coding protein_coding MGP_WSBEiJ_T0094550.1 MGP_WSBEiJ_G0034787.1 mouse_genomes_project X 38271875 38274248 + MGP_WSBEiJ_P0094550 Gm362 protein_coding protein_coding MGP_WSBEiJ_T0015816.1 MGP_WSBEiJ_G0013946.1 mouse_genomes_project X 53086420 53086744 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101145.1 MGP_WSBEiJ_G0039602.1 mouse_genomes_project X 71340745 71341705 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094777.1 MGP_WSBEiJ_G0034870.1 mouse_genomes_project X 57335914 57336736 + MGP_WSBEiJ_P0094777 4931400O07Rik protein_coding protein_coding MGP_WSBEiJ_T0094433.1 MGP_WSBEiJ_G0034743.1 mouse_genomes_project X 31754036 31755610 + MGP_WSBEiJ_P0094433 Sowahd protein_coding protein_coding MGP_WSBEiJ_T0095271.1 MGP_WSBEiJ_G0034979.1 mouse_genomes_project X 73012925 73017767 + MGP_WSBEiJ_P0095271 Gm5938 protein_coding protein_coding MGP_WSBEiJ_T0094377.1 MGP_WSBEiJ_G0034724.1 mouse_genomes_project X 16453035 16454723 - MGP_WSBEiJ_P0094377 Gm28269 protein_coding protein_coding MGP_WSBEiJ_T0015655.1 MGP_WSBEiJ_G0013785.1 mouse_genomes_project X 2110458 2110872 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011025.1 MGP_WSBEiJ_G0009182.1 mouse_genomes_project X 142187322 142187427 + Gm22650 miRNA miRNA MGP_WSBEiJ_T0016058.1 MGP_WSBEiJ_G0014188.1 mouse_genomes_project X 99488444 99488908 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011575.1 MGP_WSBEiJ_G0009732.1 mouse_genomes_project X 128338226 128338563 - Gm22552 misc_RNA misc_RNA MGP_WSBEiJ_T0015763.1 MGP_WSBEiJ_G0013893.1 mouse_genomes_project X 38389366 38390084 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005519.1 MGP_WSBEiJ_G0004649.1 mouse_genomes_project X 91187756 91191467 + F630028O10Rik antisense antisense MGP_WSBEiJ_T0005520.1 MGP_WSBEiJ_G0004649.1 mouse_genomes_project X 91187796 91191467 + F630028O10Rik antisense antisense MGP_WSBEiJ_T0095847.1 MGP_WSBEiJ_G0035153.1 mouse_genomes_project X 122739758 122747409 - MGP_WSBEiJ_P0095847 Cldn34c4 protein_coding protein_coding MGP_WSBEiJ_T0015928.1 MGP_WSBEiJ_G0014058.1 mouse_genomes_project X 77399996 77401005 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094806.1 MGP_WSBEiJ_G0034882.1 mouse_genomes_project X 64152115 64654496 + MGP_WSBEiJ_P0094806 Aff2 protein_coding protein_coding MGP_WSBEiJ_T0094807.1 MGP_WSBEiJ_G0034882.1 mouse_genomes_project X 64152326 64332017 + Aff2 protein_coding processed_transcript MGP_WSBEiJ_T0094808.1 MGP_WSBEiJ_G0034882.1 mouse_genomes_project X 64152521 64567899 + Aff2 protein_coding processed_transcript MGP_WSBEiJ_T0094809.1 MGP_WSBEiJ_G0034882.1 mouse_genomes_project X 64643159 64653237 + Aff2 protein_coding retained_intron MGP_WSBEiJ_T0095966.1 MGP_WSBEiJ_G0035188.1 mouse_genomes_project X 130772084 130776674 + MGP_WSBEiJ_P0095966 Armcx5 protein_coding protein_coding MGP_WSBEiJ_T0095971.1 MGP_WSBEiJ_G0035188.1 mouse_genomes_project X 130772086 130774758 + Armcx5 protein_coding retained_intron MGP_WSBEiJ_T0094440.1 MGP_WSBEiJ_G0034746.1 mouse_genomes_project X 31836704 31862572 + MGP_WSBEiJ_P0094440 Nkap protein_coding protein_coding MGP_WSBEiJ_T0094441.1 MGP_WSBEiJ_G0034746.1 mouse_genomes_project X 31847492 31852945 + Nkap protein_coding retained_intron MGP_WSBEiJ_T0095562.1 MGP_WSBEiJ_G0035062.1 mouse_genomes_project X 96278259 96287526 + MGP_WSBEiJ_P0095562 Gjb1 protein_coding protein_coding MGP_WSBEiJ_T0095563.1 MGP_WSBEiJ_G0035062.1 mouse_genomes_project X 96279154 96287526 + MGP_WSBEiJ_P0095563 Gjb1 protein_coding protein_coding MGP_WSBEiJ_T0095564.1 MGP_WSBEiJ_G0035062.1 mouse_genomes_project X 96285632 96287526 + MGP_WSBEiJ_P0095564 Gjb1 protein_coding protein_coding MGP_WSBEiJ_T0099947.1 MGP_WSBEiJ_G0038610.1 mouse_genomes_project X 150599325 150599457 + Gm25429 snoRNA snoRNA MGP_WSBEiJ_T0015846.1 MGP_WSBEiJ_G0013976.1 mouse_genomes_project X 57951448 57952365 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002434.1 MGP_WSBEiJ_G0002350.1 mouse_genomes_project X 98637217 98641935 - TEC TEC MGP_WSBEiJ_T0016182.1 MGP_WSBEiJ_G0014312.1 mouse_genomes_project X 129835739 129836602 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101151.1 MGP_WSBEiJ_G0039608.1 mouse_genomes_project X 81147989 81149030 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094274.1 MGP_WSBEiJ_G0034691.1 mouse_genomes_project X 11261150 11261971 + MGP_WSBEiJ_P0094274 Cypt1 protein_coding protein_coding MGP_WSBEiJ_T0094275.1 MGP_WSBEiJ_G0034691.1 mouse_genomes_project X 11261153 11261970 + MGP_WSBEiJ_P0094275 Cypt1 protein_coding protein_coding MGP_WSBEiJ_T0016197.1 MGP_WSBEiJ_G0014327.1 mouse_genomes_project X 132239422 132240256 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010953.1 MGP_WSBEiJ_G0009110.1 mouse_genomes_project X 47395398 47395481 - Mir18b miRNA miRNA MGP_WSBEiJ_T0097180.1 MGP_WSBEiJ_G0035861.1 mouse_genomes_project X 148234543 148234784 + Gm24687 ribozyme ribozyme MGP_WSBEiJ_T0016261.1 MGP_WSBEiJ_G0014391.1 mouse_genomes_project X 141840348 141840825 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016202.1 MGP_WSBEiJ_G0014332.1 mouse_genomes_project X 132759875 132763301 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015829.1 MGP_WSBEiJ_G0013959.1 mouse_genomes_project X 55797596 55798052 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015711.1 MGP_WSBEiJ_G0013841.1 mouse_genomes_project X 15057640 15058712 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015733.1 MGP_WSBEiJ_G0013863.1 mouse_genomes_project X 31356386 31357111 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096171.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139521453 139580853 + MGP_WSBEiJ_P0096171 Alg13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096172.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139521456 139544412 + MGP_WSBEiJ_P0096172 Alg13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096173.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139521456 139527612 + MGP_WSBEiJ_P0096173 Alg13 protein_coding protein_coding MGP_WSBEiJ_T0096174.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139521471 139580853 + MGP_WSBEiJ_P0096174 Alg13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096175.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139521476 139527483 + Alg13 protein_coding processed_transcript MGP_WSBEiJ_T0096176.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139521476 139580858 + MGP_WSBEiJ_P0096176 Alg13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096177.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139521494 139527592 + MGP_WSBEiJ_P0096177 Alg13 protein_coding protein_coding MGP_WSBEiJ_T0096178.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139540554 139543675 + Alg13 protein_coding processed_transcript MGP_WSBEiJ_T0096179.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139540812 139580856 + MGP_WSBEiJ_P0096179 Alg13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096180.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139541179 139547055 + Alg13 protein_coding retained_intron MGP_WSBEiJ_T0096181.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139543678 139580858 + Alg13 protein_coding processed_transcript MGP_WSBEiJ_T0096182.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139545113 139550274 + Alg13 protein_coding retained_intron MGP_WSBEiJ_T0096183.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139551499 139580858 + Alg13 protein_coding processed_transcript MGP_WSBEiJ_T0096184.1 MGP_WSBEiJ_G0035260.1 mouse_genomes_project X 139561957 139575248 + Alg13 protein_coding processed_transcript MGP_WSBEiJ_T0094699.1 MGP_WSBEiJ_G0034844.1 mouse_genomes_project X 51380186 51382113 + MGP_WSBEiJ_P0094699 Gm10477 protein_coding protein_coding MGP_WSBEiJ_T0010993.1 MGP_WSBEiJ_G0009150.1 mouse_genomes_project X 68903517 68903605 - Mir718 miRNA miRNA MGP_WSBEiJ_T0095921.1 MGP_WSBEiJ_G0035174.1 mouse_genomes_project X 129570063 129583053 - MGP_WSBEiJ_P0095921 Gla protein_coding protein_coding MGP_WSBEiJ_T0095922.1 MGP_WSBEiJ_G0035174.1 mouse_genomes_project X 129577210 129582220 - MGP_WSBEiJ_P0095922 Gla protein_coding protein_coding MGP_WSBEiJ_T0016327.1 MGP_WSBEiJ_G0014457.1 mouse_genomes_project X 158293896 158294296 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095871.1 MGP_WSBEiJ_G0035161.1 mouse_genomes_project X 129020583 129048014 + MGP_WSBEiJ_P0095871 Cstf2 protein_coding protein_coding MGP_WSBEiJ_T0095872.1 MGP_WSBEiJ_G0035161.1 mouse_genomes_project X 129020593 129048787 + MGP_WSBEiJ_P0095872 Cstf2 protein_coding protein_coding MGP_WSBEiJ_T0095873.1 MGP_WSBEiJ_G0035161.1 mouse_genomes_project X 129020611 129037264 + MGP_WSBEiJ_P0095873 Cstf2 protein_coding protein_coding MGP_WSBEiJ_T0095874.1 MGP_WSBEiJ_G0035161.1 mouse_genomes_project X 129020707 129022894 + Cstf2 protein_coding processed_transcript MGP_WSBEiJ_T0095875.1 MGP_WSBEiJ_G0035161.1 mouse_genomes_project X 129020730 129048787 + Cstf2 protein_coding retained_intron MGP_WSBEiJ_T0095876.1 MGP_WSBEiJ_G0035161.1 mouse_genomes_project X 129020730 129024031 + MGP_WSBEiJ_P0095876 Cstf2 protein_coding protein_coding MGP_WSBEiJ_T0095877.1 MGP_WSBEiJ_G0035161.1 mouse_genomes_project X 129023794 129035674 + MGP_WSBEiJ_P0095877 Cstf2 protein_coding protein_coding MGP_WSBEiJ_T0095878.1 MGP_WSBEiJ_G0035161.1 mouse_genomes_project X 129027658 129035711 + MGP_WSBEiJ_P0095878 Cstf2 protein_coding protein_coding MGP_WSBEiJ_T0018028.1 MGP_WSBEiJ_G0015198.1 mouse_genomes_project X 56009034 56027894 + C230004F18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018029.1 MGP_WSBEiJ_G0015198.1 mouse_genomes_project X 56009034 56072142 + C230004F18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018030.1 MGP_WSBEiJ_G0015198.1 mouse_genomes_project X 56009034 56013117 + C230004F18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018031.1 MGP_WSBEiJ_G0015198.1 mouse_genomes_project X 56009034 56033556 + C230004F18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0018032.1 MGP_WSBEiJ_G0015198.1 mouse_genomes_project X 56009046 56072142 + C230004F18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016212.1 MGP_WSBEiJ_G0014342.1 mouse_genomes_project X 135250132 135251113 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096497.1 MGP_WSBEiJ_G0035329.1 mouse_genomes_project X 156567893 156730853 + MGP_WSBEiJ_P0096497 Scml2 protein_coding protein_coding MGP_WSBEiJ_T0096498.1 MGP_WSBEiJ_G0035329.1 mouse_genomes_project X 156635725 156731731 + MGP_WSBEiJ_P0096498 Scml2 protein_coding protein_coding MGP_WSBEiJ_T0096499.1 MGP_WSBEiJ_G0035329.1 mouse_genomes_project X 156635784 156729591 + MGP_WSBEiJ_P0096499 Scml2 protein_coding protein_coding MGP_WSBEiJ_T0096500.1 MGP_WSBEiJ_G0035329.1 mouse_genomes_project X 156703729 156709181 + Scml2 protein_coding processed_transcript MGP_WSBEiJ_T0016138.1 MGP_WSBEiJ_G0014268.1 mouse_genomes_project X 115393309 115393765 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095605.1 MGP_WSBEiJ_G0035068.1 mouse_genomes_project X 96649800 96652534 - MGP_WSBEiJ_P0095605 Cxcr3 protein_coding protein_coding MGP_WSBEiJ_T0016051.1 MGP_WSBEiJ_G0014181.1 mouse_genomes_project X 98711715 98712888 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095887.1 MGP_WSBEiJ_G0035165.1 mouse_genomes_project X 129192673 129250365 - MGP_WSBEiJ_P0095887 Trmt2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095888.1 MGP_WSBEiJ_G0035165.1 mouse_genomes_project X 129193429 129250365 - MGP_WSBEiJ_P0095888 Trmt2b protein_coding protein_coding MGP_WSBEiJ_T0095889.1 MGP_WSBEiJ_G0035165.1 mouse_genomes_project X 129193430 129250310 - Trmt2b protein_coding retained_intron MGP_WSBEiJ_T0095890.1 MGP_WSBEiJ_G0035165.1 mouse_genomes_project X 129193434 129250303 - MGP_WSBEiJ_P0095890 Trmt2b protein_coding protein_coding MGP_WSBEiJ_T0095891.1 MGP_WSBEiJ_G0035165.1 mouse_genomes_project X 129233851 129250367 - MGP_WSBEiJ_P0095891 Trmt2b protein_coding protein_coding MGP_WSBEiJ_T0095998.1 MGP_WSBEiJ_G0035201.1 mouse_genomes_project X 131537174 131558392 - MGP_WSBEiJ_P0095998 protein_coding protein_coding MGP_WSBEiJ_T0095999.1 MGP_WSBEiJ_G0035201.1 mouse_genomes_project X 131537174 131633415 - MGP_WSBEiJ_P0095999 protein_coding protein_coding MGP_WSBEiJ_T0101147.1 MGP_WSBEiJ_G0039604.1 mouse_genomes_project X 72932773 72940713 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0093981.1 MGP_WSBEiJ_G0034613.1 mouse_genomes_project X 1651745 1664068 + MGP_WSBEiJ_P0093981 Akap4 protein_coding protein_coding MGP_WSBEiJ_T0093982.1 MGP_WSBEiJ_G0034613.1 mouse_genomes_project X 1651746 1664063 + MGP_WSBEiJ_P0093982 Akap4 protein_coding protein_coding MGP_WSBEiJ_T0093983.1 MGP_WSBEiJ_G0034613.1 mouse_genomes_project X 1652439 1664050 + MGP_WSBEiJ_P0093983 Akap4 protein_coding protein_coding MGP_WSBEiJ_T0015969.1 MGP_WSBEiJ_G0014099.1 mouse_genomes_project X 86361622 86362571 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005513.1 MGP_WSBEiJ_G0004643.1 mouse_genomes_project X 70473127 70473835 + Gm15384 antisense antisense MGP_WSBEiJ_T0095666.1 MGP_WSBEiJ_G0035092.1 mouse_genomes_project X 99178810 99295763 - MGP_WSBEiJ_P0095666 C77370 protein_coding protein_coding MGP_WSBEiJ_T0095667.1 MGP_WSBEiJ_G0035092.1 mouse_genomes_project X 99178811 99295695 - MGP_WSBEiJ_P0095667 C77370 protein_coding protein_coding MGP_WSBEiJ_T0095668.1 MGP_WSBEiJ_G0035092.1 mouse_genomes_project X 99184936 99295722 - MGP_WSBEiJ_P0095668 C77370 protein_coding protein_coding MGP_WSBEiJ_T0015883.1 MGP_WSBEiJ_G0014013.1 mouse_genomes_project X 66571911 66572126 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010931.1 MGP_WSBEiJ_G0009088.1 mouse_genomes_project X 7692013 7692113 - Gm25063 miRNA miRNA MGP_WSBEiJ_T0015654.1 MGP_WSBEiJ_G0013784.1 mouse_genomes_project X 1729301 1729732 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016125.1 MGP_WSBEiJ_G0014255.1 mouse_genomes_project X 112680204 112681193 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098698.1 MGP_WSBEiJ_G0037361.1 mouse_genomes_project X 116892099 116892207 + Gm24846 snRNA snRNA MGP_WSBEiJ_T0099916.1 MGP_WSBEiJ_G0038579.1 mouse_genomes_project X 69522553 69522688 + Gm26417 snoRNA snoRNA MGP_WSBEiJ_T0094179.1 MGP_WSBEiJ_G0034656.1 mouse_genomes_project X 3077988 3324566 + MGP_WSBEiJ_P0094179 protein_coding protein_coding MGP_WSBEiJ_T0096361.1 MGP_WSBEiJ_G0035291.1 mouse_genomes_project X 148366468 148369416 + MGP_WSBEiJ_P0096361 Usp51 protein_coding protein_coding MGP_WSBEiJ_T0015976.1 MGP_WSBEiJ_G0014106.1 mouse_genomes_project X 87471920 87473484 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095124.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69204924 69213562 + MGP_WSBEiJ_P0095124 Gdi1 protein_coding protein_coding MGP_WSBEiJ_T0095125.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69204938 69213560 + Gdi1 protein_coding retained_intron MGP_WSBEiJ_T0095126.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69205182 69208280 + Gdi1 protein_coding processed_transcript MGP_WSBEiJ_T0095127.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69205193 69213558 + Gdi1 protein_coding retained_intron MGP_WSBEiJ_T0095128.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69205239 69208417 + MGP_WSBEiJ_P0095128 Gdi1 protein_coding protein_coding MGP_WSBEiJ_T0095129.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69205754 69208458 + Gdi1 protein_coding processed_transcript MGP_WSBEiJ_T0095130.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69208421 69211267 + Gdi1 protein_coding retained_intron MGP_WSBEiJ_T0095131.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69210428 69212856 + MGP_WSBEiJ_P0095131 Gdi1 protein_coding protein_coding MGP_WSBEiJ_T0095132.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69211551 69212636 + Gdi1 protein_coding processed_transcript MGP_WSBEiJ_T0095133.1 MGP_WSBEiJ_G0034943.1 mouse_genomes_project X 69212080 69212733 + Gdi1 protein_coding processed_transcript MGP_WSBEiJ_T0010944.1 MGP_WSBEiJ_G0009101.1 mouse_genomes_project X 36603814 36603941 + Gm44490 miRNA miRNA MGP_WSBEiJ_T0096283.1 MGP_WSBEiJ_G0035278.1 mouse_genomes_project X 146686324 146812940 + Fam120c protein_coding retained_intron MGP_WSBEiJ_T0096284.1 MGP_WSBEiJ_G0035278.1 mouse_genomes_project X 146686324 146812940 + MGP_WSBEiJ_P0096284 Fam120c protein_coding protein_coding MGP_WSBEiJ_T0016265.1 MGP_WSBEiJ_G0014395.1 mouse_genomes_project X 145754226 145754505 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096117.1 MGP_WSBEiJ_G0035240.1 mouse_genomes_project X 136000109 136006727 - MGP_WSBEiJ_P0096117 Tex13 protein_coding protein_coding MGP_WSBEiJ_T0096118.1 MGP_WSBEiJ_G0035240.1 mouse_genomes_project X 136002562 136004146 - Tex13 protein_coding retained_intron MGP_WSBEiJ_T0094763.1 MGP_WSBEiJ_G0034863.1 mouse_genomes_project X 54944030 55062467 - MGP_WSBEiJ_P0094763 Mcf2 protein_coding protein_coding MGP_WSBEiJ_T0094764.1 MGP_WSBEiJ_G0034863.1 mouse_genomes_project X 54944030 55029678 - MGP_WSBEiJ_P0094764 Mcf2 protein_coding protein_coding MGP_WSBEiJ_T0094765.1 MGP_WSBEiJ_G0034863.1 mouse_genomes_project X 54944033 55029620 - MGP_WSBEiJ_P0094765 Mcf2 protein_coding protein_coding MGP_WSBEiJ_T0015869.1 MGP_WSBEiJ_G0013999.1 mouse_genomes_project X 63398840 63399188 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016320.1 MGP_WSBEiJ_G0014450.1 mouse_genomes_project X 156150942 156151072 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016065.1 MGP_WSBEiJ_G0014195.1 mouse_genomes_project X 100829119 100829960 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095328.1 MGP_WSBEiJ_G0034995.1 mouse_genomes_project X 80754253 80757370 + MGP_WSBEiJ_P0095328 Samt3 protein_coding protein_coding MGP_WSBEiJ_T0016106.1 MGP_WSBEiJ_G0014236.1 mouse_genomes_project X 109152346 109153915 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099948.1 MGP_WSBEiJ_G0038611.1 mouse_genomes_project X 151880119 151880216 - Gm23404 snoRNA snoRNA MGP_WSBEiJ_T0010997.1 MGP_WSBEiJ_G0009154.1 mouse_genomes_project X 80283832 80283909 + Gm44378 miRNA miRNA MGP_WSBEiJ_T0094490.1 MGP_WSBEiJ_G0034777.1 mouse_genomes_project X 33297935 33310014 + Mcts1 protein_coding processed_transcript MGP_WSBEiJ_T0094491.1 MGP_WSBEiJ_G0034777.1 mouse_genomes_project X 33298012 33313837 + MGP_WSBEiJ_P0094491 Mcts1 protein_coding protein_coding MGP_WSBEiJ_T0094492.1 MGP_WSBEiJ_G0034777.1 mouse_genomes_project X 33298656 33304626 + Mcts1 protein_coding processed_transcript MGP_WSBEiJ_T0094493.1 MGP_WSBEiJ_G0034777.1 mouse_genomes_project X 33306903 33313837 + Mcts1 protein_coding processed_transcript MGP_WSBEiJ_T0094494.1 MGP_WSBEiJ_G0034777.1 mouse_genomes_project X 33307983 33313811 + Mcts1 protein_coding processed_transcript MGP_WSBEiJ_T0094405.1 MGP_WSBEiJ_G0034734.1 mouse_genomes_project X 31108117 31114205 - Gm14569 protein_coding processed_transcript MGP_WSBEiJ_T0094406.1 MGP_WSBEiJ_G0034734.1 mouse_genomes_project X 31108117 31111196 - Gm14569 protein_coding processed_transcript MGP_WSBEiJ_T0094407.1 MGP_WSBEiJ_G0034734.1 mouse_genomes_project X 31108117 31177449 - MGP_WSBEiJ_P0094407 Gm14569 protein_coding protein_coding MGP_WSBEiJ_T0094408.1 MGP_WSBEiJ_G0034734.1 mouse_genomes_project X 31123322 31169068 - Gm14569 protein_coding processed_transcript MGP_WSBEiJ_T0010963.1 MGP_WSBEiJ_G0009120.1 mouse_genomes_project X 53962582 53962661 - Mir504 miRNA miRNA MGP_WSBEiJ_T0016336.1 MGP_WSBEiJ_G0014466.1 mouse_genomes_project X 160399982 160400259 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015836.1 MGP_WSBEiJ_G0013966.1 mouse_genomes_project X 56657729 56658399 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015967.1 MGP_WSBEiJ_G0014097.1 mouse_genomes_project X 86137943 86138607 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010987.1 MGP_WSBEiJ_G0009144.1 mouse_genomes_project X 67114316 67114398 - Mir224 miRNA miRNA MGP_WSBEiJ_T0015716.1 MGP_WSBEiJ_G0013846.1 mouse_genomes_project X 15599327 15599526 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095737.1 MGP_WSBEiJ_G0035113.1 mouse_genomes_project X 102301988 102325484 + MGP_WSBEiJ_P0095737 A630033H20Rik protein_coding protein_coding MGP_WSBEiJ_T0095738.1 MGP_WSBEiJ_G0035113.1 mouse_genomes_project X 102301988 102327744 + MGP_WSBEiJ_P0095738 A630033H20Rik protein_coding protein_coding MGP_WSBEiJ_T0095739.1 MGP_WSBEiJ_G0035113.1 mouse_genomes_project X 102302515 102325510 + MGP_WSBEiJ_P0095739 A630033H20Rik protein_coding protein_coding MGP_WSBEiJ_T0095740.1 MGP_WSBEiJ_G0035113.1 mouse_genomes_project X 102302515 102327744 + MGP_WSBEiJ_P0095740 A630033H20Rik protein_coding protein_coding MGP_WSBEiJ_T0095741.1 MGP_WSBEiJ_G0035113.1 mouse_genomes_project X 102302659 102325230 + MGP_WSBEiJ_P0095741 A630033H20Rik protein_coding protein_coding MGP_WSBEiJ_T0095742.1 MGP_WSBEiJ_G0035113.1 mouse_genomes_project X 102302676 102327740 + MGP_WSBEiJ_P0095742 A630033H20Rik protein_coding protein_coding MGP_WSBEiJ_T0015707.1 MGP_WSBEiJ_G0013837.1 mouse_genomes_project X 14450380 14450925 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015856.1 MGP_WSBEiJ_G0013986.1 mouse_genomes_project X 60934065 60934327 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094460.1 MGP_WSBEiJ_G0034764.1 mouse_genomes_project X 32476914 32483519 + MGP_WSBEiJ_P0094460 protein_coding protein_coding MGP_WSBEiJ_T0094154.1 MGP_WSBEiJ_G0034649.1 mouse_genomes_project X 2819542 2827664 - MGP_WSBEiJ_P0094154 Ebp protein_coding protein_coding MGP_WSBEiJ_T0094155.1 MGP_WSBEiJ_G0034649.1 mouse_genomes_project X 2819544 2821388 - Ebp protein_coding retained_intron MGP_WSBEiJ_T0094156.1 MGP_WSBEiJ_G0034649.1 mouse_genomes_project X 2820961 2827552 - MGP_WSBEiJ_P0094156 Ebp protein_coding protein_coding MGP_WSBEiJ_T0094157.1 MGP_WSBEiJ_G0034649.1 mouse_genomes_project X 2824022 2827050 - Ebp protein_coding retained_intron MGP_WSBEiJ_T0097228.1 MGP_WSBEiJ_G0035909.1 mouse_genomes_project X 91095283 91095419 - Gm24718 scaRNA scaRNA MGP_WSBEiJ_T0101130.1 MGP_WSBEiJ_G0039587.1 mouse_genomes_project X 3830627 3831140 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016043.1 MGP_WSBEiJ_G0014173.1 mouse_genomes_project X 98353422 98354287 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095805.1 MGP_WSBEiJ_G0035135.1 mouse_genomes_project X 107705368 107733091 + Zfp711 protein_coding retained_intron MGP_WSBEiJ_T0095806.1 MGP_WSBEiJ_G0035135.1 mouse_genomes_project X 107705368 107741173 + MGP_WSBEiJ_P0095806 Zfp711 protein_coding protein_coding MGP_WSBEiJ_T0095807.1 MGP_WSBEiJ_G0035135.1 mouse_genomes_project X 107705577 107743899 + MGP_WSBEiJ_P0095807 Zfp711 protein_coding unknown_likely_coding MGP_WSBEiJ_T0095808.1 MGP_WSBEiJ_G0035135.1 mouse_genomes_project X 107722739 107738021 + MGP_WSBEiJ_P0095808 Zfp711 protein_coding protein_coding MGP_WSBEiJ_T0094496.1 MGP_WSBEiJ_G0034779.1 mouse_genomes_project X 33484975 33662569 + MGP_WSBEiJ_P0094496 6030498E09Rik protein_coding protein_coding MGP_WSBEiJ_T0094497.1 MGP_WSBEiJ_G0034779.1 mouse_genomes_project X 33658040 33659510 + MGP_WSBEiJ_P0094497 6030498E09Rik protein_coding protein_coding MGP_WSBEiJ_T0015782.1 MGP_WSBEiJ_G0013912.1 mouse_genomes_project X 43846460 43846809 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096451.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155049294 155403858 + MGP_WSBEiJ_P0096451 Sh3kbp1 protein_coding protein_coding MGP_WSBEiJ_T0096452.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155049561 155342971 + Sh3kbp1 protein_coding retained_intron MGP_WSBEiJ_T0096453.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155049561 155398949 + MGP_WSBEiJ_P0096453 Sh3kbp1 protein_coding protein_coding MGP_WSBEiJ_T0096454.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155115184 155288556 + MGP_WSBEiJ_P0096454 Sh3kbp1 protein_coding protein_coding MGP_WSBEiJ_T0096455.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155126457 155399645 + MGP_WSBEiJ_P0096455 Sh3kbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096456.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155126457 155399947 + MGP_WSBEiJ_P0096456 Sh3kbp1 protein_coding protein_coding MGP_WSBEiJ_T0096457.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155261835 155401442 + MGP_WSBEiJ_P0096457 Sh3kbp1 protein_coding protein_coding MGP_WSBEiJ_T0096458.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155261848 155399947 + MGP_WSBEiJ_P0096458 Sh3kbp1 protein_coding protein_coding MGP_WSBEiJ_T0096459.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155262330 155401694 + Sh3kbp1 protein_coding processed_transcript MGP_WSBEiJ_T0096460.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155341744 155399099 + MGP_WSBEiJ_P0096460 Sh3kbp1 protein_coding protein_coding MGP_WSBEiJ_T0096461.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155367700 155397732 + Sh3kbp1 protein_coding processed_transcript MGP_WSBEiJ_T0096462.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155368696 155401695 + Sh3kbp1 protein_coding processed_transcript MGP_WSBEiJ_T0096463.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155368915 155399947 + Sh3kbp1 protein_coding processed_transcript MGP_WSBEiJ_T0096464.1 MGP_WSBEiJ_G0035320.1 mouse_genomes_project X 155369021 155398970 + Sh3kbp1 protein_coding processed_transcript MGP_WSBEiJ_T0015999.1 MGP_WSBEiJ_G0014129.1 mouse_genomes_project X 90201740 90202723 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096041.1 MGP_WSBEiJ_G0035217.1 mouse_genomes_project X 132249440 132253691 - MGP_WSBEiJ_P0096041 Esx1 protein_coding protein_coding MGP_WSBEiJ_T0096042.1 MGP_WSBEiJ_G0035217.1 mouse_genomes_project X 132249440 132253846 - MGP_WSBEiJ_P0096042 Esx1 protein_coding protein_coding MGP_WSBEiJ_T0094753.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 53924988 54000010 - MGP_WSBEiJ_P0094753 Fgf13 protein_coding protein_coding MGP_WSBEiJ_T0094754.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 53924988 54031672 - MGP_WSBEiJ_P0094754 Fgf13 protein_coding protein_coding MGP_WSBEiJ_T0094755.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 53924988 54451225 - MGP_WSBEiJ_P0094755 Fgf13 protein_coding protein_coding MGP_WSBEiJ_T0094756.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 53926301 53998785 - Fgf13 protein_coding processed_transcript MGP_WSBEiJ_T0094757.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 53997463 53998733 - Fgf13 protein_coding processed_transcript MGP_WSBEiJ_T0094758.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 53997466 54450626 - MGP_WSBEiJ_P0094758 Fgf13 protein_coding protein_coding MGP_WSBEiJ_T0094759.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 54125233 54451225 - MGP_WSBEiJ_P0094759 Fgf13 protein_coding protein_coding MGP_WSBEiJ_T0094760.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 54125310 54450975 - MGP_WSBEiJ_P0094760 Fgf13 protein_coding protein_coding MGP_WSBEiJ_T0094761.1 MGP_WSBEiJ_G0034861.1 mouse_genomes_project X 54449967 54451202 - Fgf13 protein_coding retained_intron MGP_WSBEiJ_T0018081.1 MGP_WSBEiJ_G0015214.1 mouse_genomes_project X 158224866 158226401 - Gm15201 processed_transcript processed_transcript MGP_WSBEiJ_T0015682.1 MGP_WSBEiJ_G0013812.1 mouse_genomes_project X 7465507 7465867 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016068.1 MGP_WSBEiJ_G0014198.1 mouse_genomes_project X 101786147 101787020 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095384.1 MGP_WSBEiJ_G0035017.1 mouse_genomes_project X 89463841 89470515 - MGP_WSBEiJ_P0095384 Maged1 protein_coding protein_coding MGP_WSBEiJ_T0095385.1 MGP_WSBEiJ_G0035017.1 mouse_genomes_project X 89463843 89466203 - Maged1 protein_coding retained_intron MGP_WSBEiJ_T0095386.1 MGP_WSBEiJ_G0035017.1 mouse_genomes_project X 89463843 89470362 - Maged1 protein_coding retained_intron MGP_WSBEiJ_T0095387.1 MGP_WSBEiJ_G0035017.1 mouse_genomes_project X 89463843 89465932 - Maged1 protein_coding retained_intron MGP_WSBEiJ_T0095388.1 MGP_WSBEiJ_G0035017.1 mouse_genomes_project X 89464449 89466252 - Maged1 protein_coding retained_intron MGP_WSBEiJ_T0095389.1 MGP_WSBEiJ_G0035017.1 mouse_genomes_project X 89466042 89467194 - Maged1 protein_coding retained_intron MGP_WSBEiJ_T0095390.1 MGP_WSBEiJ_G0035017.1 mouse_genomes_project X 89468861 89470375 - Maged1 protein_coding retained_intron MGP_WSBEiJ_T0011570.1 MGP_WSBEiJ_G0009727.1 mouse_genomes_project X 98687717 98687922 + Gm27321 misc_RNA misc_RNA MGP_WSBEiJ_T0016026.1 MGP_WSBEiJ_G0014156.1 mouse_genomes_project X 96426985 96428099 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016009.1 MGP_WSBEiJ_G0014139.1 mouse_genomes_project X 92074115 92075383 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095300.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 77589549 78161077 + Dmd protein_coding retained_intron MGP_WSBEiJ_T0095301.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 77589582 79905976 + MGP_WSBEiJ_P0095301 Dmd protein_coding protein_coding MGP_WSBEiJ_T0095302.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 77684031 78415934 + Dmd protein_coding retained_intron MGP_WSBEiJ_T0095304.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 78547948 78579380 + Dmd protein_coding processed_transcript MGP_WSBEiJ_T0095305.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 78775439 79009950 + Dmd protein_coding processed_transcript MGP_WSBEiJ_T0095306.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 79280215 79843328 + Dmd protein_coding retained_intron MGP_WSBEiJ_T0095307.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 79454182 79660794 + Dmd protein_coding retained_intron MGP_WSBEiJ_T0095308.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 79734668 79741971 + Dmd protein_coding retained_intron MGP_WSBEiJ_T0095309.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 79734692 79838817 + Dmd protein_coding retained_intron MGP_WSBEiJ_T0095310.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 79734695 79843326 + Dmd protein_coding retained_intron MGP_WSBEiJ_T0095311.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 79734786 79904874 + MGP_WSBEiJ_P0095311 Dmd protein_coding protein_coding MGP_WSBEiJ_T0095312.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 79734786 79902333 + MGP_WSBEiJ_P0095312 Dmd protein_coding protein_coding MGP_WSBEiJ_T0095313.1 MGP_WSBEiJ_G0034989.1 mouse_genomes_project X 79877071 79902672 + Dmd protein_coding processed_transcript MGP_WSBEiJ_T0016171.1 MGP_WSBEiJ_G0014301.1 mouse_genomes_project X 128010562 128011350 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096106.1 MGP_WSBEiJ_G0035238.1 mouse_genomes_project X 135719487 135722625 - Tsc22d3 protein_coding processed_transcript MGP_WSBEiJ_T0096107.1 MGP_WSBEiJ_G0035238.1 mouse_genomes_project X 135719487 135723145 - MGP_WSBEiJ_P0096107 Tsc22d3 protein_coding protein_coding MGP_WSBEiJ_T0096108.1 MGP_WSBEiJ_G0035238.1 mouse_genomes_project X 135719496 135723058 - Tsc22d3 protein_coding retained_intron MGP_WSBEiJ_T0096109.1 MGP_WSBEiJ_G0035238.1 mouse_genomes_project X 135720218 135781049 - MGP_WSBEiJ_P0096109 Tsc22d3 protein_coding protein_coding MGP_WSBEiJ_T0096110.1 MGP_WSBEiJ_G0035238.1 mouse_genomes_project X 135720307 135728313 - MGP_WSBEiJ_P0096110 Tsc22d3 protein_coding protein_coding MGP_WSBEiJ_T0096111.1 MGP_WSBEiJ_G0035238.1 mouse_genomes_project X 135723059 135728504 - Tsc22d3 protein_coding processed_transcript MGP_WSBEiJ_T0016330.1 MGP_WSBEiJ_G0014460.1 mouse_genomes_project X 158715691 158716168 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096445.1 MGP_WSBEiJ_G0035319.1 mouse_genomes_project X 154940538 154969680 + MGP_WSBEiJ_P0096445 A830080D01Rik protein_coding protein_coding MGP_WSBEiJ_T0096446.1 MGP_WSBEiJ_G0035319.1 mouse_genomes_project X 154949246 155011403 + MGP_WSBEiJ_P0096446 A830080D01Rik protein_coding protein_coding MGP_WSBEiJ_T0096447.1 MGP_WSBEiJ_G0035319.1 mouse_genomes_project X 154949351 155011390 + MGP_WSBEiJ_P0096447 A830080D01Rik protein_coding protein_coding MGP_WSBEiJ_T0096448.1 MGP_WSBEiJ_G0035319.1 mouse_genomes_project X 154959556 154969730 + MGP_WSBEiJ_P0096448 A830080D01Rik protein_coding protein_coding MGP_WSBEiJ_T0096449.1 MGP_WSBEiJ_G0035319.1 mouse_genomes_project X 154984747 155010524 + A830080D01Rik protein_coding processed_transcript MGP_WSBEiJ_T0096450.1 MGP_WSBEiJ_G0035319.1 mouse_genomes_project X 154985436 154992999 + A830080D01Rik protein_coding retained_intron MGP_WSBEiJ_T0096441.1 MGP_WSBEiJ_G0035318.1 mouse_genomes_project X 154824037 154911738 + MGP_WSBEiJ_P0096441 Map7d2 protein_coding protein_coding MGP_WSBEiJ_T0096442.1 MGP_WSBEiJ_G0035318.1 mouse_genomes_project X 154857155 154903743 + MGP_WSBEiJ_P0096442 Map7d2 protein_coding protein_coding MGP_WSBEiJ_T0096443.1 MGP_WSBEiJ_G0035318.1 mouse_genomes_project X 154872277 154899645 + MGP_WSBEiJ_P0096443 Map7d2 protein_coding protein_coding MGP_WSBEiJ_T0096444.1 MGP_WSBEiJ_G0035318.1 mouse_genomes_project X 154872289 154883182 + MGP_WSBEiJ_P0096444 Map7d2 protein_coding protein_coding MGP_WSBEiJ_T0015871.1 MGP_WSBEiJ_G0014001.1 mouse_genomes_project X 63726547 63727403 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094682.1 MGP_WSBEiJ_G0034833.1 mouse_genomes_project X 48194897 48196746 - MGP_WSBEiJ_P0094682 Gm14597 protein_coding protein_coding MGP_WSBEiJ_T0094852.1 MGP_WSBEiJ_G0034893.1 mouse_genomes_project X 66667184 66676429 + MGP_WSBEiJ_P0094852 Vma21 protein_coding protein_coding MGP_WSBEiJ_T0094853.1 MGP_WSBEiJ_G0034893.1 mouse_genomes_project X 66668018 66676429 + MGP_WSBEiJ_P0094853 Vma21 protein_coding protein_coding MGP_WSBEiJ_T0094854.1 MGP_WSBEiJ_G0034893.1 mouse_genomes_project X 66668050 66697468 + Vma21 protein_coding processed_transcript MGP_WSBEiJ_T0094855.1 MGP_WSBEiJ_G0034893.1 mouse_genomes_project X 66668050 66676429 + MGP_WSBEiJ_P0094855 Vma21 protein_coding protein_coding MGP_WSBEiJ_T0015960.1 MGP_WSBEiJ_G0014090.1 mouse_genomes_project X 84669912 84670162 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010924.1 MGP_WSBEiJ_G0009081.1 mouse_genomes_project X 690691 690771 + Gm27907 miRNA miRNA MGP_WSBEiJ_T0095391.1 MGP_WSBEiJ_G0035018.1 mouse_genomes_project X 89568773 89571264 + MGP_WSBEiJ_P0095391 Gspt2 protein_coding protein_coding MGP_WSBEiJ_T0095392.1 MGP_WSBEiJ_G0035018.1 mouse_genomes_project X 89568780 89575955 + MGP_WSBEiJ_P0095392 Gspt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0016056.1 MGP_WSBEiJ_G0014186.1 mouse_genomes_project X 99016487 99017935 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015652.1 MGP_WSBEiJ_G0013782.1 mouse_genomes_project X 690099 690945 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095861.1 MGP_WSBEiJ_G0035157.1 mouse_genomes_project X 128815993 128830562 + MGP_WSBEiJ_P0095861 Tnmd protein_coding protein_coding MGP_WSBEiJ_T0016172.1 MGP_WSBEiJ_G0014302.1 mouse_genomes_project X 128077922 128079545 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096057.1 MGP_WSBEiJ_G0035224.1 mouse_genomes_project X 134325055 134350922 + MGP_WSBEiJ_P0096057 Mum1l1 protein_coding protein_coding MGP_WSBEiJ_T0096058.1 MGP_WSBEiJ_G0035224.1 mouse_genomes_project X 134325055 134354280 + MGP_WSBEiJ_P0096058 Mum1l1 protein_coding protein_coding MGP_WSBEiJ_T0096059.1 MGP_WSBEiJ_G0035224.1 mouse_genomes_project X 134325057 134354282 + MGP_WSBEiJ_P0096059 Mum1l1 protein_coding protein_coding MGP_WSBEiJ_T0096060.1 MGP_WSBEiJ_G0035224.1 mouse_genomes_project X 134325121 134328299 + Mum1l1 protein_coding retained_intron MGP_WSBEiJ_T0096061.1 MGP_WSBEiJ_G0035224.1 mouse_genomes_project X 134332180 134354282 + MGP_WSBEiJ_P0096061 Mum1l1 protein_coding protein_coding MGP_WSBEiJ_T0096062.1 MGP_WSBEiJ_G0035224.1 mouse_genomes_project X 134332180 134354282 + MGP_WSBEiJ_P0096062 Mum1l1 protein_coding protein_coding MGP_WSBEiJ_T0096063.1 MGP_WSBEiJ_G0035224.1 mouse_genomes_project X 134332180 134350749 + MGP_WSBEiJ_P0096063 Mum1l1 protein_coding protein_coding MGP_WSBEiJ_T0096064.1 MGP_WSBEiJ_G0035224.1 mouse_genomes_project X 134332180 134350988 + MGP_WSBEiJ_P0096064 Mum1l1 protein_coding protein_coding MGP_WSBEiJ_T0096043.1 MGP_WSBEiJ_G0035218.1 mouse_genomes_project X 132687321 133958549 + MGP_WSBEiJ_P0096043 Il1rapl2 protein_coding protein_coding MGP_WSBEiJ_T0096044.1 MGP_WSBEiJ_G0035218.1 mouse_genomes_project X 132687733 133630211 + Il1rapl2 protein_coding retained_intron MGP_WSBEiJ_T0096045.1 MGP_WSBEiJ_G0035218.1 mouse_genomes_project X 132773110 133958227 + MGP_WSBEiJ_P0096045 Il1rapl2 protein_coding protein_coding MGP_WSBEiJ_T0016001.1 MGP_WSBEiJ_G0014131.1 mouse_genomes_project X 91139177 91139616 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098695.1 MGP_WSBEiJ_G0037358.1 mouse_genomes_project X 108430269 108430395 - Gm24831 snRNA snRNA MGP_WSBEiJ_T0011587.1 MGP_WSBEiJ_G0009744.1 mouse_genomes_project X 164778422 164778591 + Gm27980 misc_RNA misc_RNA MGP_WSBEiJ_T0016016.1 MGP_WSBEiJ_G0014146.1 mouse_genomes_project X 93956165 93957170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015892.1 MGP_WSBEiJ_G0014022.1 mouse_genomes_project X 69469012 69469761 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096380.1 MGP_WSBEiJ_G0035300.1 mouse_genomes_project X 149738275 149742443 - MGP_WSBEiJ_P0096380 4930524N10Rik protein_coding protein_coding MGP_WSBEiJ_T0011574.1 MGP_WSBEiJ_G0009731.1 mouse_genomes_project X 127658661 127658864 + Gm22143 misc_RNA misc_RNA MGP_WSBEiJ_T0094447.1 MGP_WSBEiJ_G0034752.1 mouse_genomes_project X 31976812 31977040 + MGP_WSBEiJ_P0094447 protein_coding protein_coding MGP_WSBEiJ_T0095621.1 MGP_WSBEiJ_G0035073.1 mouse_genomes_project X 97080251 97095589 - MGP_WSBEiJ_P0095621 Ercc6l protein_coding protein_coding MGP_WSBEiJ_T0016163.1 MGP_WSBEiJ_G0014293.1 mouse_genomes_project X 125544277 125544719 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010956.1 MGP_WSBEiJ_G0009113.1 mouse_genomes_project X 47729069 47729160 - Mir450-1 miRNA miRNA MGP_WSBEiJ_T0098664.1 MGP_WSBEiJ_G0037327.1 mouse_genomes_project X 40434607 40434714 - Gm25078 snRNA snRNA MGP_WSBEiJ_T0096047.1 MGP_WSBEiJ_G0035220.1 mouse_genomes_project X 134023937 134122432 + MGP_WSBEiJ_P0096047 Nrk protein_coding protein_coding MGP_WSBEiJ_T0096048.1 MGP_WSBEiJ_G0035220.1 mouse_genomes_project X 134023938 134077372 + Nrk protein_coding processed_transcript MGP_WSBEiJ_T0096049.1 MGP_WSBEiJ_G0035220.1 mouse_genomes_project X 134023938 134123922 + MGP_WSBEiJ_P0096049 Nrk protein_coding protein_coding MGP_WSBEiJ_T0096050.1 MGP_WSBEiJ_G0035220.1 mouse_genomes_project X 134023938 134123144 + MGP_WSBEiJ_P0096050 Nrk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096051.1 MGP_WSBEiJ_G0035220.1 mouse_genomes_project X 134095401 134102512 + Nrk protein_coding retained_intron MGP_WSBEiJ_T0015669.1 MGP_WSBEiJ_G0013799.1 mouse_genomes_project X 3661785 3662625 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094449.1 MGP_WSBEiJ_G0034754.1 mouse_genomes_project X 32118326 32119674 + MGP_WSBEiJ_P0094449 protein_coding protein_coding MGP_WSBEiJ_T0095330.1 MGP_WSBEiJ_G0034997.1 mouse_genomes_project X 81484711 82904687 - MGP_WSBEiJ_P0095330 Il1rapl1 protein_coding protein_coding MGP_WSBEiJ_T0095331.1 MGP_WSBEiJ_G0034997.1 mouse_genomes_project X 81491079 82669843 - MGP_WSBEiJ_P0095331 Il1rapl1 protein_coding protein_coding MGP_WSBEiJ_T0095332.1 MGP_WSBEiJ_G0034997.1 mouse_genomes_project X 81513710 82904687 - MGP_WSBEiJ_P0095332 Il1rapl1 protein_coding protein_coding MGP_WSBEiJ_T0015705.1 MGP_WSBEiJ_G0013835.1 mouse_genomes_project X 14093048 14093539 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098705.1 MGP_WSBEiJ_G0037368.1 mouse_genomes_project X 133543079 133543184 - Gm23958 snRNA snRNA MGP_WSBEiJ_T0016305.1 MGP_WSBEiJ_G0014435.1 mouse_genomes_project X 153619496 153622162 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015800.1 MGP_WSBEiJ_G0013930.1 mouse_genomes_project X 48338441 48338945 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016055.1 MGP_WSBEiJ_G0014185.1 mouse_genomes_project X 98977745 98978750 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016128.1 MGP_WSBEiJ_G0014258.1 mouse_genomes_project X 112924039 112924420 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016122.1 MGP_WSBEiJ_G0014252.1 mouse_genomes_project X 112317623 112317891 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010980.1 MGP_WSBEiJ_G0009137.1 mouse_genomes_project X 61693201 61693270 - Mir465 miRNA miRNA MGP_WSBEiJ_T0015938.1 MGP_WSBEiJ_G0014068.1 mouse_genomes_project X 80527850 80528110 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098688.1 MGP_WSBEiJ_G0037351.1 mouse_genomes_project X 100934878 100935061 + Gm26020 snRNA snRNA MGP_WSBEiJ_T0009296.1 MGP_WSBEiJ_G0007461.1 mouse_genomes_project X 162534597 162541794 - Gm8817 lincRNA lincRNA MGP_WSBEiJ_T0009297.1 MGP_WSBEiJ_G0007461.1 mouse_genomes_project X 162534740 162541794 - Gm8817 lincRNA lincRNA MGP_WSBEiJ_T0009298.1 MGP_WSBEiJ_G0007461.1 mouse_genomes_project X 162534956 162539803 - Gm8817 lincRNA lincRNA MGP_WSBEiJ_T0094409.1 MGP_WSBEiJ_G0034735.1 mouse_genomes_project X 31286659 31295640 + MGP_WSBEiJ_P0094409 Pgrmc1 protein_coding protein_coding MGP_WSBEiJ_T0096040.1 MGP_WSBEiJ_G0035216.1 mouse_genomes_project X 132176730 132209812 + MGP_WSBEiJ_P0096040 Fam199x protein_coding protein_coding MGP_WSBEiJ_T0099949.1 MGP_WSBEiJ_G0038612.1 mouse_genomes_project X 152732251 152732383 - Gm25795 snoRNA snoRNA MGP_WSBEiJ_T0011571.1 MGP_WSBEiJ_G0009728.1 mouse_genomes_project X 104254588 104254880 - Gm26415 misc_RNA misc_RNA MGP_WSBEiJ_T0009277.1 MGP_WSBEiJ_G0007451.1 mouse_genomes_project X 145424898 145425668 - lincRNA lincRNA MGP_WSBEiJ_T0009279.1 MGP_WSBEiJ_G0007451.1 mouse_genomes_project X 145425249 145425663 - lincRNA lincRNA MGP_WSBEiJ_T0095798.1 MGP_WSBEiJ_G0035132.1 mouse_genomes_project X 107416579 107483973 + MGP_WSBEiJ_P0095798 Apool protein_coding protein_coding MGP_WSBEiJ_T0095799.1 MGP_WSBEiJ_G0035132.1 mouse_genomes_project X 107416593 107458412 + Apool protein_coding retained_intron MGP_WSBEiJ_T0095800.1 MGP_WSBEiJ_G0035132.1 mouse_genomes_project X 107416611 107483648 + MGP_WSBEiJ_P0095800 Apool protein_coding protein_coding MGP_WSBEiJ_T0094733.1 MGP_WSBEiJ_G0034855.1 mouse_genomes_project X 52127262 52137178 - Arhgef6 protein_coding retained_intron MGP_WSBEiJ_T0094734.1 MGP_WSBEiJ_G0034855.1 mouse_genomes_project X 52127262 52238098 - MGP_WSBEiJ_P0094734 Arhgef6 protein_coding protein_coding MGP_WSBEiJ_T0094735.1 MGP_WSBEiJ_G0034855.1 mouse_genomes_project X 52129217 52178076 - MGP_WSBEiJ_P0094735 Arhgef6 protein_coding protein_coding MGP_WSBEiJ_T0094736.1 MGP_WSBEiJ_G0034855.1 mouse_genomes_project X 52134994 52148257 - MGP_WSBEiJ_P0094736 Arhgef6 protein_coding protein_coding MGP_WSBEiJ_T0094737.1 MGP_WSBEiJ_G0034855.1 mouse_genomes_project X 52145895 52223699 - MGP_WSBEiJ_P0094737 Arhgef6 protein_coding protein_coding MGP_WSBEiJ_T0094738.1 MGP_WSBEiJ_G0034855.1 mouse_genomes_project X 52168665 52223701 - Arhgef6 protein_coding retained_intron MGP_WSBEiJ_T0094739.1 MGP_WSBEiJ_G0034855.1 mouse_genomes_project X 52195575 52197890 - Arhgef6 protein_coding processed_transcript MGP_WSBEiJ_T0094740.1 MGP_WSBEiJ_G0034855.1 mouse_genomes_project X 52235111 52237875 - Arhgef6 protein_coding retained_intron MGP_WSBEiJ_T0096209.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145718270 145763763 - MGP_WSBEiJ_P0096209 Tmem29 protein_coding protein_coding MGP_WSBEiJ_T0096210.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145718270 145782381 - MGP_WSBEiJ_P0096210 Tmem29 protein_coding protein_coding MGP_WSBEiJ_T0096211.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145719292 145782381 - Tmem29 protein_coding processed_transcript MGP_WSBEiJ_T0096212.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145731067 145782385 - Tmem29 protein_coding processed_transcript MGP_WSBEiJ_T0096213.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145731067 145763732 - Tmem29 protein_coding processed_transcript MGP_WSBEiJ_T0096214.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145731073 145763531 - MGP_WSBEiJ_P0096214 Tmem29 protein_coding protein_coding MGP_WSBEiJ_T0096215.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145731409 145782385 - Tmem29 protein_coding processed_transcript MGP_WSBEiJ_T0096216.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145731595 145758148 - Tmem29 protein_coding processed_transcript MGP_WSBEiJ_T0096217.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145731660 145763531 - Tmem29 protein_coding processed_transcript MGP_WSBEiJ_T0096218.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145739439 145782385 - Tmem29 protein_coding retained_intron MGP_WSBEiJ_T0096219.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145759774 145763789 - Tmem29 protein_coding processed_transcript MGP_WSBEiJ_T0096220.1 MGP_WSBEiJ_G0035268.1 mouse_genomes_project X 145760579 145763415 - Tmem29 protein_coding processed_transcript MGP_WSBEiJ_T0009239.1 MGP_WSBEiJ_G0007427.1 mouse_genomes_project X 75784179 75786596 - Gm26775 lincRNA lincRNA MGP_WSBEiJ_T0095338.1 MGP_WSBEiJ_G0035002.1 mouse_genomes_project X 85679487 85680480 + MGP_WSBEiJ_P0095338 Gm44 protein_coding protein_coding MGP_WSBEiJ_T0005499.1 MGP_WSBEiJ_G0004631.1 mouse_genomes_project X 40950847 41002872 - 4930515L19Rik antisense antisense MGP_WSBEiJ_T0101166.1 MGP_WSBEiJ_G0039623.1 mouse_genomes_project X 142922438 142922766 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094495.1 MGP_WSBEiJ_G0034778.1 mouse_genomes_project X 33332270 33336589 - MGP_WSBEiJ_P0094495 C1galt1c1 protein_coding protein_coding MGP_WSBEiJ_T0097138.1 MGP_WSBEiJ_G0035819.1 mouse_genomes_project X 8029753 8029865 - n-R5s3 rRNA rRNA MGP_WSBEiJ_T0095658.1 MGP_WSBEiJ_G0035088.1 mouse_genomes_project X 98479624 98540362 + MGP_WSBEiJ_P0095658 Gm26992 protein_coding protein_coding MGP_WSBEiJ_T0095730.1 MGP_WSBEiJ_G0035109.1 mouse_genomes_project X 101756093 101877288 + MGP_WSBEiJ_P0095730 Gm5127 protein_coding protein_coding MGP_WSBEiJ_T0095731.1 MGP_WSBEiJ_G0035109.1 mouse_genomes_project X 101756093 101876593 + MGP_WSBEiJ_P0095731 Gm5127 protein_coding protein_coding MGP_WSBEiJ_T0015770.1 MGP_WSBEiJ_G0013900.1 mouse_genomes_project X 40176465 40178915 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096639.1 MGP_WSBEiJ_G0035367.1 mouse_genomes_project X 162940909 163617939 - MGP_WSBEiJ_P0096639 Frmpd4 protein_coding protein_coding MGP_WSBEiJ_T0096640.1 MGP_WSBEiJ_G0035367.1 mouse_genomes_project X 162940909 164049586 - MGP_WSBEiJ_P0096640 Frmpd4 protein_coding protein_coding MGP_WSBEiJ_T0096641.1 MGP_WSBEiJ_G0035367.1 mouse_genomes_project X 162940913 163380601 - MGP_WSBEiJ_P0096641 Frmpd4 protein_coding protein_coding MGP_WSBEiJ_T0096642.1 MGP_WSBEiJ_G0035367.1 mouse_genomes_project X 162944898 163206132 - MGP_WSBEiJ_P0096642 Frmpd4 protein_coding protein_coding MGP_WSBEiJ_T0096277.1 MGP_WSBEiJ_G0035277.1 mouse_genomes_project X 146511890 146656818 + MGP_WSBEiJ_P0096277 Wnk3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096278.1 MGP_WSBEiJ_G0035277.1 mouse_genomes_project X 146544289 146656876 + MGP_WSBEiJ_P0096278 Wnk3 protein_coding protein_coding MGP_WSBEiJ_T0096279.1 MGP_WSBEiJ_G0035277.1 mouse_genomes_project X 146544351 146656818 + MGP_WSBEiJ_P0096279 Wnk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096280.1 MGP_WSBEiJ_G0035277.1 mouse_genomes_project X 146544351 146659996 + MGP_WSBEiJ_P0096280 Wnk3 protein_coding protein_coding MGP_WSBEiJ_T0096281.1 MGP_WSBEiJ_G0035277.1 mouse_genomes_project X 146553961 146573558 + Wnk3 protein_coding processed_transcript MGP_WSBEiJ_T0096282.1 MGP_WSBEiJ_G0035277.1 mouse_genomes_project X 146635931 146661838 + Wnk3 protein_coding processed_transcript MGP_WSBEiJ_T0010949.1 MGP_WSBEiJ_G0009106.1 mouse_genomes_project X 47394760 47394835 - Mir363 miRNA miRNA MGP_WSBEiJ_T0099937.1 MGP_WSBEiJ_G0038600.1 mouse_genomes_project X 127484532 127484656 + Gm26406 snoRNA snoRNA MGP_WSBEiJ_T0096362.1 MGP_WSBEiJ_G0035292.1 mouse_genomes_project X 148396358 148397768 - MGP_WSBEiJ_P0096362 Mageh1 protein_coding protein_coding MGP_WSBEiJ_T0094746.1 MGP_WSBEiJ_G0034858.1 mouse_genomes_project X 52400903 52408007 - MGP_WSBEiJ_P0094746 Gpr101 protein_coding protein_coding MGP_WSBEiJ_T0094123.1 MGP_WSBEiJ_G0034642.1 mouse_genomes_project X 2582241 2592621 - MGP_WSBEiJ_P0094123 Gata1 protein_coding protein_coding MGP_WSBEiJ_T0094124.1 MGP_WSBEiJ_G0034642.1 mouse_genomes_project X 2586025 2602748 - MGP_WSBEiJ_P0094124 Gata1 protein_coding protein_coding MGP_WSBEiJ_T0094125.1 MGP_WSBEiJ_G0034642.1 mouse_genomes_project X 2586614 2587772 - MGP_WSBEiJ_P0094125 Gata1 protein_coding protein_coding MGP_WSBEiJ_T0015931.1 MGP_WSBEiJ_G0014061.1 mouse_genomes_project X 79935077 79935280 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095809.1 MGP_WSBEiJ_G0035136.1 mouse_genomes_project X 107745383 107811317 - MGP_WSBEiJ_P0095809 Pof1b protein_coding protein_coding MGP_WSBEiJ_T0009230.1 MGP_WSBEiJ_G0007420.1 mouse_genomes_project X 51157945 51162269 + 1600025M17Rik lincRNA lincRNA MGP_WSBEiJ_T0009231.1 MGP_WSBEiJ_G0007420.1 mouse_genomes_project X 51158003 51161129 + 1600025M17Rik lincRNA lincRNA MGP_WSBEiJ_T0097156.1 MGP_WSBEiJ_G0035837.1 mouse_genomes_project X 157716504 157716632 + Gm27490 rRNA rRNA MGP_WSBEiJ_T0016130.1 MGP_WSBEiJ_G0014260.1 mouse_genomes_project X 112925641 112927403 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016121.1 MGP_WSBEiJ_G0014251.1 mouse_genomes_project X 111923734 111924124 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015979.1 MGP_WSBEiJ_G0014109.1 mouse_genomes_project X 88814686 88816578 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009244.1 MGP_WSBEiJ_G0007431.1 mouse_genomes_project X 89362110 89367532 + Gm14827 lincRNA lincRNA MGP_WSBEiJ_T0009215.1 MGP_WSBEiJ_G0007409.1 mouse_genomes_project X 9581844 9614330 + Gm14505 lincRNA lincRNA MGP_WSBEiJ_T0095973.1 MGP_WSBEiJ_G0035189.1 mouse_genomes_project X 130873025 130878430 + MGP_WSBEiJ_P0095973 Gprasp2 protein_coding protein_coding MGP_WSBEiJ_T0095974.1 MGP_WSBEiJ_G0035189.1 mouse_genomes_project X 130873048 130875496 + Gprasp2 protein_coding processed_transcript MGP_WSBEiJ_T0095975.1 MGP_WSBEiJ_G0035189.1 mouse_genomes_project X 130873057 130878426 + MGP_WSBEiJ_P0095975 Gprasp2 protein_coding protein_coding MGP_WSBEiJ_T0095976.1 MGP_WSBEiJ_G0035189.1 mouse_genomes_project X 130873252 130875334 + Gprasp2 protein_coding retained_intron MGP_WSBEiJ_T0095977.1 MGP_WSBEiJ_G0035189.1 mouse_genomes_project X 130873523 130875496 + Gprasp2 protein_coding retained_intron MGP_WSBEiJ_T0095978.1 MGP_WSBEiJ_G0035189.1 mouse_genomes_project X 130873664 130875433 + Gprasp2 protein_coding processed_transcript MGP_WSBEiJ_T0095274.1 MGP_WSBEiJ_G0034982.1 mouse_genomes_project X 73245355 73246841 + MGP_WSBEiJ_P0095274 4930480E11Rik protein_coding protein_coding MGP_WSBEiJ_T0095606.1 MGP_WSBEiJ_G0035069.1 mouse_genomes_project X 96713608 96717691 + MGP_WSBEiJ_P0095606 8030474K03Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095607.1 MGP_WSBEiJ_G0035069.1 mouse_genomes_project X 96713608 96717691 + MGP_WSBEiJ_P0095607 8030474K03Rik protein_coding protein_coding MGP_WSBEiJ_T0095608.1 MGP_WSBEiJ_G0035069.1 mouse_genomes_project X 96715633 96717695 + MGP_WSBEiJ_P0095608 8030474K03Rik protein_coding protein_coding MGP_WSBEiJ_T0010957.1 MGP_WSBEiJ_G0009114.1 mouse_genomes_project X 47729214 47729283 - Mir450-2 miRNA miRNA MGP_WSBEiJ_T0016284.1 MGP_WSBEiJ_G0014414.1 mouse_genomes_project X 149624203 149624802 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015718.1 MGP_WSBEiJ_G0013848.1 mouse_genomes_project X 16207313 16208887 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016146.1 MGP_WSBEiJ_G0014276.1 mouse_genomes_project X 116890774 116891542 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016129.1 MGP_WSBEiJ_G0014259.1 mouse_genomes_project X 112924547 112924751 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015683.1 MGP_WSBEiJ_G0013813.1 mouse_genomes_project X 7487977 7488085 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098693.1 MGP_WSBEiJ_G0037356.1 mouse_genomes_project X 104165030 104165137 - Gm25797 snRNA snRNA MGP_WSBEiJ_T0016339.1 MGP_WSBEiJ_G0014469.1 mouse_genomes_project X 161524400 161526413 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016112.1 MGP_WSBEiJ_G0014242.1 mouse_genomes_project X 109950662 109950869 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016155.1 MGP_WSBEiJ_G0014285.1 mouse_genomes_project X 123063228 123066024 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016285.1 MGP_WSBEiJ_G0014415.1 mouse_genomes_project X 149835771 149836418 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096296.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147127776 147131399 + Huwe1 protein_coding processed_transcript MGP_WSBEiJ_T0096297.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147127782 147267007 + MGP_WSBEiJ_P0096297 Huwe1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096298.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147128207 147133748 + Huwe1 protein_coding processed_transcript MGP_WSBEiJ_T0096299.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130133 147203734 + MGP_WSBEiJ_P0096299 Huwe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096300.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130151 147133748 + Huwe1 protein_coding processed_transcript MGP_WSBEiJ_T0096301.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130217 147179663 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096302.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130217 147267005 + MGP_WSBEiJ_P0096302 Huwe1 protein_coding protein_coding MGP_WSBEiJ_T0096303.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130237 147187010 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096304.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130237 147204251 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096305.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130548 147161743 + MGP_WSBEiJ_P0096305 Huwe1 protein_coding protein_coding MGP_WSBEiJ_T0096306.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130552 147174050 + Huwe1 protein_coding processed_transcript MGP_WSBEiJ_T0096307.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130552 147202338 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096308.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147130552 147166576 + MGP_WSBEiJ_P0096308 Huwe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096309.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147161714 147267005 + MGP_WSBEiJ_P0096309 Huwe1 protein_coding protein_coding MGP_WSBEiJ_T0096310.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147186630 147222885 + MGP_WSBEiJ_P0096310 Huwe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096311.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147194736 147204605 + MGP_WSBEiJ_P0096311 Huwe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096312.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147214299 147215014 + Huwe1 protein_coding processed_transcript MGP_WSBEiJ_T0096313.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147236800 147241724 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096314.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147240651 147242196 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096315.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147240651 147241999 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096316.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147253080 147254411 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096317.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147253141 147255532 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0096318.1 MGP_WSBEiJ_G0035280.1 mouse_genomes_project X 147256056 147259472 + Huwe1 protein_coding retained_intron MGP_WSBEiJ_T0015872.1 MGP_WSBEiJ_G0014002.1 mouse_genomes_project X 65341036 65341559 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094842.1 MGP_WSBEiJ_G0034890.1 mouse_genomes_project X 66261183 66336876 - MGP_WSBEiJ_P0094842 Cd99l2 protein_coding protein_coding MGP_WSBEiJ_T0094843.1 MGP_WSBEiJ_G0034890.1 mouse_genomes_project X 66261183 66336672 - MGP_WSBEiJ_P0094843 Cd99l2 protein_coding protein_coding MGP_WSBEiJ_T0094844.1 MGP_WSBEiJ_G0034890.1 mouse_genomes_project X 66263748 66336876 - MGP_WSBEiJ_P0094844 Cd99l2 protein_coding protein_coding MGP_WSBEiJ_T0094845.1 MGP_WSBEiJ_G0034890.1 mouse_genomes_project X 66281613 66336676 - Cd99l2 protein_coding retained_intron MGP_WSBEiJ_T0094846.1 MGP_WSBEiJ_G0034890.1 mouse_genomes_project X 66335925 66336632 - Cd99l2 protein_coding processed_transcript MGP_WSBEiJ_T0016109.1 MGP_WSBEiJ_G0014239.1 mouse_genomes_project X 109318116 109318855 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016013.1 MGP_WSBEiJ_G0014143.1 mouse_genomes_project X 93366577 93367065 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015920.1 MGP_WSBEiJ_G0014050.1 mouse_genomes_project X 75102423 75103108 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015670.1 MGP_WSBEiJ_G0013800.1 mouse_genomes_project X 3661787 3662625 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016160.1 MGP_WSBEiJ_G0014290.1 mouse_genomes_project X 125379785 125381045 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010968.1 MGP_WSBEiJ_G0009125.1 mouse_genomes_project X 61648155 61648232 - Mir743b miRNA miRNA MGP_WSBEiJ_T0099913.1 MGP_WSBEiJ_G0038576.1 mouse_genomes_project X 68623145 68623268 + Gm25226 snoRNA snoRNA MGP_WSBEiJ_T0094182.1 MGP_WSBEiJ_G0034659.1 mouse_genomes_project X 3212062 3257733 - MGP_WSBEiJ_P0094182 protein_coding protein_coding MGP_WSBEiJ_T0098701.1 MGP_WSBEiJ_G0037364.1 mouse_genomes_project X 122910674 122910781 - Gm25061 snRNA snRNA MGP_WSBEiJ_T0095938.1 MGP_WSBEiJ_G0035179.1 mouse_genomes_project X 129758326 129764516 + MGP_WSBEiJ_P0095938 protein_coding protein_coding MGP_WSBEiJ_T0095939.1 MGP_WSBEiJ_G0035179.1 mouse_genomes_project X 129758338 129764525 + MGP_WSBEiJ_P0095939 protein_coding protein_coding MGP_WSBEiJ_T0095940.1 MGP_WSBEiJ_G0035179.1 mouse_genomes_project X 129758378 129764546 + MGP_WSBEiJ_P0095940 protein_coding protein_coding MGP_WSBEiJ_T0016014.1 MGP_WSBEiJ_G0014144.1 mouse_genomes_project X 93395933 93396419 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098651.1 MGP_WSBEiJ_G0037314.1 mouse_genomes_project X 10444605 10444712 - Gm25207 snRNA snRNA MGP_WSBEiJ_T0016319.1 MGP_WSBEiJ_G0014449.1 mouse_genomes_project X 156150642 156150925 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095199.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70020795 70034673 + MGP_WSBEiJ_P0095199 Dkc1 protein_coding protein_coding MGP_WSBEiJ_T0095200.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70020991 70027484 + MGP_WSBEiJ_P0095200 Dkc1 protein_coding protein_coding MGP_WSBEiJ_T0095201.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70021024 70023827 + MGP_WSBEiJ_P0095201 Dkc1 protein_coding protein_coding MGP_WSBEiJ_T0095202.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70021037 70023737 + Dkc1 protein_coding retained_intron MGP_WSBEiJ_T0095203.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70021039 70023887 + Dkc1 protein_coding processed_transcript MGP_WSBEiJ_T0095204.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70021053 70027406 + MGP_WSBEiJ_P0095204 Dkc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095205.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70021484 70023759 + Dkc1 protein_coding retained_intron MGP_WSBEiJ_T0095206.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70024857 70032107 + Dkc1 protein_coding retained_intron MGP_WSBEiJ_T0095207.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70024992 70033139 + MGP_WSBEiJ_P0095207 Dkc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095208.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70025198 70030614 + Dkc1 protein_coding processed_transcript MGP_WSBEiJ_T0095209.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70025857 70030662 + Dkc1 protein_coding processed_transcript MGP_WSBEiJ_T0095210.1 MGP_WSBEiJ_G0034957.1 mouse_genomes_project X 70030844 70033172 + Dkc1 protein_coding retained_intron MGP_WSBEiJ_T0010942.1 MGP_WSBEiJ_G0009099.1 mouse_genomes_project X 34648046 34648117 - Gm26194 miRNA miRNA MGP_WSBEiJ_T0096195.1 MGP_WSBEiJ_G0035265.1 mouse_genomes_project X 142149001 142269998 + Htr2c protein_coding retained_intron MGP_WSBEiJ_T0096196.1 MGP_WSBEiJ_G0035265.1 mouse_genomes_project X 142149001 142177280 + Htr2c protein_coding retained_intron MGP_WSBEiJ_T0096197.1 MGP_WSBEiJ_G0035265.1 mouse_genomes_project X 142149118 142264462 + Htr2c protein_coding processed_transcript MGP_WSBEiJ_T0096198.1 MGP_WSBEiJ_G0035265.1 mouse_genomes_project X 142149511 142375900 + MGP_WSBEiJ_P0096198 Htr2c protein_coding protein_coding MGP_WSBEiJ_T0096199.1 MGP_WSBEiJ_G0035265.1 mouse_genomes_project X 142262318 142390735 + MGP_WSBEiJ_P0096199 Htr2c protein_coding protein_coding MGP_WSBEiJ_T0094629.1 MGP_WSBEiJ_G0034810.1 mouse_genomes_project X 44340834 44341794 + MGP_WSBEiJ_P0094629 Olfr1320 protein_coding protein_coding MGP_WSBEiJ_T0015884.1 MGP_WSBEiJ_G0014014.1 mouse_genomes_project X 67546173 67546509 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095170.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69299568 69340427 + MGP_WSBEiJ_P0095170 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095171.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69299569 69359620 + MGP_WSBEiJ_P0095171 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095172.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69299569 69359620 + MGP_WSBEiJ_P0095172 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095173.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69299605 69346322 + MGP_WSBEiJ_P0095173 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095177.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69330965 69346384 + MGP_WSBEiJ_P0095177 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095178.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69331035 69354583 + MGP_WSBEiJ_P0095178 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095179.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69331043 69359696 + MGP_WSBEiJ_P0095179 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095180.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69331043 69359620 + MGP_WSBEiJ_P0095180 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095181.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69331064 69354942 + MGP_WSBEiJ_P0095181 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095182.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69331069 69339302 + MGP_WSBEiJ_P0095182 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095184.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69334333 69343604 + MGP_WSBEiJ_P0095184 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095185.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69335714 69349748 + MGP_WSBEiJ_P0095185 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095186.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69335748 69359620 + MGP_WSBEiJ_P0095186 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095187.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69336104 69356128 + MGP_WSBEiJ_P0095187 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095188.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69336137 69357362 + MGP_WSBEiJ_P0095188 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095189.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69336155 69339789 + Ikbkg protein_coding retained_intron MGP_WSBEiJ_T0095190.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69336196 69350245 + MGP_WSBEiJ_P0095190 Ikbkg protein_coding protein_coding MGP_WSBEiJ_T0095191.1 MGP_WSBEiJ_G0034950.1 mouse_genomes_project X 69345320 69354065 + Ikbkg protein_coding processed_transcript MGP_WSBEiJ_T0015779.1 MGP_WSBEiJ_G0013909.1 mouse_genomes_project X 42679238 42679683 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096185.1 MGP_WSBEiJ_G0035261.1 mouse_genomes_project X 139588117 139898779 - MGP_WSBEiJ_P0096185 Trpc5 protein_coding protein_coding MGP_WSBEiJ_T0096186.1 MGP_WSBEiJ_G0035261.1 mouse_genomes_project X 139626215 139898602 - Trpc5 protein_coding retained_intron MGP_WSBEiJ_T0015893.1 MGP_WSBEiJ_G0014023.1 mouse_genomes_project X 69664353 69664737 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009224.1 MGP_WSBEiJ_G0007416.1 mouse_genomes_project X 33177966 33184463 + Gm7598 lincRNA lincRNA MGP_WSBEiJ_T0094057.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2374882 2378392 + Tfe3 protein_coding retained_intron MGP_WSBEiJ_T0094058.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2374908 2379088 + Tfe3 protein_coding processed_transcript MGP_WSBEiJ_T0094059.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2374980 2387523 + MGP_WSBEiJ_P0094059 Tfe3 protein_coding protein_coding MGP_WSBEiJ_T0094060.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2374986 2387520 + MGP_WSBEiJ_P0094060 Tfe3 protein_coding protein_coding MGP_WSBEiJ_T0094061.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2374998 2387522 + MGP_WSBEiJ_P0094061 Tfe3 protein_coding protein_coding MGP_WSBEiJ_T0094062.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2375017 2387520 + MGP_WSBEiJ_P0094062 Tfe3 protein_coding protein_coding MGP_WSBEiJ_T0094063.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2375019 2387522 + Tfe3 protein_coding retained_intron MGP_WSBEiJ_T0094064.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2375089 2387523 + MGP_WSBEiJ_P0094064 Tfe3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094065.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2376265 2379113 + MGP_WSBEiJ_P0094065 Tfe3 protein_coding protein_coding MGP_WSBEiJ_T0094066.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2376281 2387522 + MGP_WSBEiJ_P0094066 Tfe3 protein_coding protein_coding MGP_WSBEiJ_T0094067.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2376363 2387518 + MGP_WSBEiJ_P0094067 Tfe3 protein_coding protein_coding MGP_WSBEiJ_T0094068.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2376409 2387520 + MGP_WSBEiJ_P0094068 Tfe3 protein_coding protein_coding MGP_WSBEiJ_T0094069.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2376974 2387518 + Tfe3 protein_coding retained_intron MGP_WSBEiJ_T0094070.1 MGP_WSBEiJ_G0034629.1 mouse_genomes_project X 2381750 2383639 + Tfe3 protein_coding retained_intron MGP_WSBEiJ_T0095565.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96310248 96326724 - MGP_WSBEiJ_P0095565 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095566.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96310248 96325790 - MGP_WSBEiJ_P0095566 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095567.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96310248 96325674 - MGP_WSBEiJ_P0095567 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095568.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96310248 96326591 - MGP_WSBEiJ_P0095568 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095569.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96311843 96315596 - Zmym3 protein_coding processed_transcript MGP_WSBEiJ_T0095570.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96319105 96320795 - Zmym3 protein_coding retained_intron MGP_WSBEiJ_T0095571.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320076 96323353 - Zmym3 protein_coding processed_transcript MGP_WSBEiJ_T0095572.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320384 96321042 - Zmym3 protein_coding retained_intron MGP_WSBEiJ_T0095573.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320804 96323252 - Zmym3 protein_coding retained_intron MGP_WSBEiJ_T0095574.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320805 96325685 - MGP_WSBEiJ_P0095574 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095575.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320808 96326560 - MGP_WSBEiJ_P0095575 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095576.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320808 96325717 - MGP_WSBEiJ_P0095576 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095577.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320813 96326092 - MGP_WSBEiJ_P0095577 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095578.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320833 96326240 - MGP_WSBEiJ_P0095578 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0095579.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96320890 96323249 - Zmym3 protein_coding retained_intron MGP_WSBEiJ_T0095580.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96322062 96325705 - Zmym3 protein_coding processed_transcript MGP_WSBEiJ_T0095581.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96322149 96323566 - Zmym3 protein_coding retained_intron MGP_WSBEiJ_T0095582.1 MGP_WSBEiJ_G0035063.1 mouse_genomes_project X 96322258 96325736 - MGP_WSBEiJ_P0095582 Zmym3 protein_coding protein_coding MGP_WSBEiJ_T0011001.1 MGP_WSBEiJ_G0009158.1 mouse_genomes_project X 93589112 93589210 - Gm27554 miRNA miRNA MGP_WSBEiJ_T0094995.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68792745 68795735 - Naa10 protein_coding processed_transcript MGP_WSBEiJ_T0094996.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68792745 68797806 - MGP_WSBEiJ_P0094996 Naa10 protein_coding protein_coding MGP_WSBEiJ_T0094997.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68792768 68797746 - MGP_WSBEiJ_P0094997 Naa10 protein_coding protein_coding MGP_WSBEiJ_T0094998.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68792792 68797694 - MGP_WSBEiJ_P0094998 Naa10 protein_coding protein_coding MGP_WSBEiJ_T0094999.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68792952 68797754 - MGP_WSBEiJ_P0094999 Naa10 protein_coding protein_coding MGP_WSBEiJ_T0095000.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68792964 68795780 - Naa10 protein_coding processed_transcript MGP_WSBEiJ_T0095001.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68793346 68797690 - MGP_WSBEiJ_P0095001 Naa10 protein_coding protein_coding MGP_WSBEiJ_T0095002.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68793733 68796338 - Naa10 protein_coding retained_intron MGP_WSBEiJ_T0095003.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68793941 68797768 - Naa10 protein_coding retained_intron MGP_WSBEiJ_T0095004.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68796838 68797717 - Naa10 protein_coding retained_intron MGP_WSBEiJ_T0095005.1 MGP_WSBEiJ_G0034929.1 mouse_genomes_project X 68796974 68797714 - Naa10 protein_coding retained_intron MGP_WSBEiJ_T0096404.1 MGP_WSBEiJ_G0035309.1 mouse_genomes_project X 152879121 152930157 - MGP_WSBEiJ_P0096404 Sms protein_coding protein_coding MGP_WSBEiJ_T0096405.1 MGP_WSBEiJ_G0035309.1 mouse_genomes_project X 152891345 152897076 - Sms protein_coding retained_intron MGP_WSBEiJ_T0096406.1 MGP_WSBEiJ_G0035309.1 mouse_genomes_project X 152895088 152929914 - Sms protein_coding retained_intron MGP_WSBEiJ_T0096407.1 MGP_WSBEiJ_G0035309.1 mouse_genomes_project X 152902403 152929239 - MGP_WSBEiJ_P0096407 Sms protein_coding protein_coding MGP_WSBEiJ_T0016021.1 MGP_WSBEiJ_G0014151.1 mouse_genomes_project X 95219807 95220962 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016144.1 MGP_WSBEiJ_G0014274.1 mouse_genomes_project X 116802756 116805668 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015725.1 MGP_WSBEiJ_G0013855.1 mouse_genomes_project X 18085400 18085850 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016179.1 MGP_WSBEiJ_G0014309.1 mouse_genomes_project X 129748347 129748778 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095340.1 MGP_WSBEiJ_G0035004.1 mouse_genomes_project X 86450082 86453555 + MGP_WSBEiJ_P0095340 Mageb5 protein_coding protein_coding MGP_WSBEiJ_T0015737.1 MGP_WSBEiJ_G0013867.1 mouse_genomes_project X 33470975 33471269 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016353.1 MGP_WSBEiJ_G0014483.1 mouse_genomes_project X 164253011 164253411 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098692.1 MGP_WSBEiJ_G0037355.1 mouse_genomes_project X 104150684 104150851 - Gm23322 snRNA snRNA MGP_WSBEiJ_T0016295.1 MGP_WSBEiJ_G0014425.1 mouse_genomes_project X 152207931 152208214 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094083.1 MGP_WSBEiJ_G0034632.1 mouse_genomes_project X 2456221 2456866 + Otud5 protein_coding processed_transcript MGP_WSBEiJ_T0094084.1 MGP_WSBEiJ_G0034632.1 mouse_genomes_project X 2456688 2495709 + MGP_WSBEiJ_P0094084 Otud5 protein_coding protein_coding MGP_WSBEiJ_T0094085.1 MGP_WSBEiJ_G0034632.1 mouse_genomes_project X 2456713 2493943 + MGP_WSBEiJ_P0094085 Otud5 protein_coding protein_coding MGP_WSBEiJ_T0094086.1 MGP_WSBEiJ_G0034632.1 mouse_genomes_project X 2456913 2494368 + MGP_WSBEiJ_P0094086 Otud5 protein_coding protein_coding MGP_WSBEiJ_T0094087.1 MGP_WSBEiJ_G0034632.1 mouse_genomes_project X 2456939 2494373 + MGP_WSBEiJ_P0094087 Otud5 protein_coding protein_coding MGP_WSBEiJ_T0094088.1 MGP_WSBEiJ_G0034632.1 mouse_genomes_project X 2456973 2495703 + MGP_WSBEiJ_P0094088 Otud5 protein_coding protein_coding MGP_WSBEiJ_T0094089.1 MGP_WSBEiJ_G0034632.1 mouse_genomes_project X 2457462 2494367 + Otud5 protein_coding retained_intron MGP_WSBEiJ_T0094090.1 MGP_WSBEiJ_G0034632.1 mouse_genomes_project X 2457463 2487047 + Otud5 protein_coding retained_intron MGP_WSBEiJ_T0094109.1 MGP_WSBEiJ_G0034637.1 mouse_genomes_project X 2526443 2526586 - MGP_WSBEiJ_P0094109 protein_coding protein_coding MGP_WSBEiJ_T0100181.1 MGP_WSBEiJ_G0038750.1 mouse_genomes_project X 102722670 102723889 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100182.1 MGP_WSBEiJ_G0038750.1 mouse_genomes_project X 102722679 102723834 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0015726.1 MGP_WSBEiJ_G0013856.1 mouse_genomes_project X 18521321 18522537 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095193.1 MGP_WSBEiJ_G0034953.1 mouse_genomes_project X 69498051 69498999 + MGP_WSBEiJ_P0095193 Olfr1325 protein_coding protein_coding MGP_WSBEiJ_T0010933.1 MGP_WSBEiJ_G0009090.1 mouse_genomes_project X 10467037 10467101 + Gm22464 miRNA miRNA MGP_WSBEiJ_T0095649.1 MGP_WSBEiJ_G0035082.1 mouse_genomes_project X 97891375 97896842 - MGP_WSBEiJ_P0095649 Dmrtc1a protein_coding protein_coding MGP_WSBEiJ_T0095650.1 MGP_WSBEiJ_G0035082.1 mouse_genomes_project X 97891381 97894728 - MGP_WSBEiJ_P0095650 Dmrtc1a protein_coding protein_coding MGP_WSBEiJ_T0095651.1 MGP_WSBEiJ_G0035082.1 mouse_genomes_project X 97891381 97894639 - MGP_WSBEiJ_P0095651 Dmrtc1a protein_coding protein_coding MGP_WSBEiJ_T0095652.1 MGP_WSBEiJ_G0035082.1 mouse_genomes_project X 97891381 97896857 - MGP_WSBEiJ_P0095652 Dmrtc1a protein_coding protein_coding MGP_WSBEiJ_T0015994.1 MGP_WSBEiJ_G0014124.1 mouse_genomes_project X 89706315 89707731 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016246.1 MGP_WSBEiJ_G0014376.1 mouse_genomes_project X 139706909 139708389 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016274.1 MGP_WSBEiJ_G0014404.1 mouse_genomes_project X 147087500 147088216 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096570.1 MGP_WSBEiJ_G0035348.1 mouse_genomes_project X 159909378 159942025 + MGP_WSBEiJ_P0096570 Vegfd protein_coding protein_coding MGP_WSBEiJ_T0096571.1 MGP_WSBEiJ_G0035348.1 mouse_genomes_project X 159930173 159939742 + Vegfd protein_coding retained_intron MGP_WSBEiJ_T0016028.1 MGP_WSBEiJ_G0014158.1 mouse_genomes_project X 96719476 96720357 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015903.1 MGP_WSBEiJ_G0014033.1 mouse_genomes_project X 71867223 71867478 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094353.1 MGP_WSBEiJ_G0034715.1 mouse_genomes_project X 15621091 15638386 - MGP_WSBEiJ_P0094353 Elk1 protein_coding protein_coding MGP_WSBEiJ_T0094354.1 MGP_WSBEiJ_G0034715.1 mouse_genomes_project X 15627418 15638386 - Elk1 protein_coding retained_intron MGP_WSBEiJ_T0095490.1 MGP_WSBEiJ_G0035044.1 mouse_genomes_project X 95380178 95402470 + MGP_WSBEiJ_P0095490 Igbp1 protein_coding protein_coding MGP_WSBEiJ_T0095491.1 MGP_WSBEiJ_G0035044.1 mouse_genomes_project X 95380242 95385275 + Igbp1 protein_coding retained_intron MGP_WSBEiJ_T0094101.1 MGP_WSBEiJ_G0034635.1 mouse_genomes_project X 2513460 2518208 - MGP_WSBEiJ_P0094101 Pqbp1 protein_coding protein_coding MGP_WSBEiJ_T0094102.1 MGP_WSBEiJ_G0034635.1 mouse_genomes_project X 2513524 2517919 - MGP_WSBEiJ_P0094102 Pqbp1 protein_coding protein_coding MGP_WSBEiJ_T0094103.1 MGP_WSBEiJ_G0034635.1 mouse_genomes_project X 2513652 2518138 - MGP_WSBEiJ_P0094103 Pqbp1 protein_coding protein_coding MGP_WSBEiJ_T0094104.1 MGP_WSBEiJ_G0034635.1 mouse_genomes_project X 2513735 2517940 - MGP_WSBEiJ_P0094104 Pqbp1 protein_coding protein_coding MGP_WSBEiJ_T0094105.1 MGP_WSBEiJ_G0034635.1 mouse_genomes_project X 2514824 2517836 - MGP_WSBEiJ_P0094105 Pqbp1 protein_coding protein_coding MGP_WSBEiJ_T0011572.1 MGP_WSBEiJ_G0009729.1 mouse_genomes_project X 122409549 122409824 + Gm22636 misc_RNA misc_RNA MGP_WSBEiJ_T0010962.1 MGP_WSBEiJ_G0009119.1 mouse_genomes_project X 51450543 51450606 - Mir5116 miRNA miRNA MGP_WSBEiJ_T0095459.1 MGP_WSBEiJ_G0035036.1 mouse_genomes_project X 93803110 93812920 + MGP_WSBEiJ_P0095459 Yipf6 protein_coding protein_coding MGP_WSBEiJ_T0095460.1 MGP_WSBEiJ_G0035036.1 mouse_genomes_project X 93804066 93811424 + MGP_WSBEiJ_P0095460 Yipf6 protein_coding protein_coding MGP_WSBEiJ_T0095461.1 MGP_WSBEiJ_G0035036.1 mouse_genomes_project X 93804094 93806675 + MGP_WSBEiJ_P0095461 Yipf6 protein_coding protein_coding MGP_WSBEiJ_T0095462.1 MGP_WSBEiJ_G0035036.1 mouse_genomes_project X 93804554 93812695 + Yipf6 protein_coding retained_intron MGP_WSBEiJ_T0095463.1 MGP_WSBEiJ_G0035036.1 mouse_genomes_project X 93804554 93816808 + MGP_WSBEiJ_P0095463 Yipf6 protein_coding protein_coding MGP_WSBEiJ_T0095464.1 MGP_WSBEiJ_G0035036.1 mouse_genomes_project X 93805000 93811824 + Yipf6 protein_coding retained_intron MGP_WSBEiJ_T0009264.1 MGP_WSBEiJ_G0007441.1 mouse_genomes_project X 100472214 100519785 - 5330434G04Rik lincRNA lincRNA MGP_WSBEiJ_T0009265.1 MGP_WSBEiJ_G0007441.1 mouse_genomes_project X 100474294 100519785 - 5330434G04Rik lincRNA lincRNA MGP_WSBEiJ_T0009266.1 MGP_WSBEiJ_G0007441.1 mouse_genomes_project X 100499636 100519763 - 5330434G04Rik lincRNA lincRNA MGP_WSBEiJ_T0009267.1 MGP_WSBEiJ_G0007441.1 mouse_genomes_project X 100502304 100515921 - 5330434G04Rik lincRNA lincRNA MGP_WSBEiJ_T0094414.1 MGP_WSBEiJ_G0034738.1 mouse_genomes_project X 31485798 31486978 + protein_coding retained_intron MGP_WSBEiJ_T0094252.1 MGP_WSBEiJ_G0034686.1 mouse_genomes_project X 8097844 8109612 + MGP_WSBEiJ_P0094252 Ddx3x protein_coding protein_coding MGP_WSBEiJ_T0094253.1 MGP_WSBEiJ_G0034686.1 mouse_genomes_project X 8097896 8108886 + Ddx3x protein_coding processed_transcript MGP_WSBEiJ_T0094254.1 MGP_WSBEiJ_G0034686.1 mouse_genomes_project X 8097906 8104735 + Ddx3x protein_coding retained_intron MGP_WSBEiJ_T0094255.1 MGP_WSBEiJ_G0034686.1 mouse_genomes_project X 8104146 8105715 + Ddx3x protein_coding retained_intron MGP_WSBEiJ_T0094256.1 MGP_WSBEiJ_G0034686.1 mouse_genomes_project X 8104647 8106778 + Ddx3x protein_coding retained_intron MGP_WSBEiJ_T0094296.1 MGP_WSBEiJ_G0034702.1 mouse_genomes_project X 14778322 14964311 - MGP_WSBEiJ_P0094296 Slc9a7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094297.1 MGP_WSBEiJ_G0034702.1 mouse_genomes_project X 14782955 14964434 - MGP_WSBEiJ_P0094297 Slc9a7 protein_coding protein_coding MGP_WSBEiJ_T0094298.1 MGP_WSBEiJ_G0034702.1 mouse_genomes_project X 14792047 14964413 - Slc9a7 protein_coding retained_intron MGP_WSBEiJ_T0094299.1 MGP_WSBEiJ_G0034702.1 mouse_genomes_project X 14825373 14964397 - MGP_WSBEiJ_P0094299 Slc9a7 protein_coding protein_coding MGP_WSBEiJ_T0094300.1 MGP_WSBEiJ_G0034702.1 mouse_genomes_project X 14837656 14964434 - Slc9a7 protein_coding retained_intron MGP_WSBEiJ_T0011034.1 MGP_WSBEiJ_G0009191.1 mouse_genomes_project X 147244141 147244224 + Mirlet7f-2 miRNA miRNA MGP_WSBEiJ_T0096484.1 MGP_WSBEiJ_G0035325.1 mouse_genomes_project X 156055328 156157776 - MGP_WSBEiJ_P0096484 Ppef1 protein_coding protein_coding MGP_WSBEiJ_T0096485.1 MGP_WSBEiJ_G0035325.1 mouse_genomes_project X 156077807 156180882 - MGP_WSBEiJ_P0096485 Ppef1 protein_coding protein_coding MGP_WSBEiJ_T0096486.1 MGP_WSBEiJ_G0035325.1 mouse_genomes_project X 156131014 156157740 - MGP_WSBEiJ_P0096486 Ppef1 protein_coding protein_coding MGP_WSBEiJ_T0096200.1 MGP_WSBEiJ_G0035266.1 mouse_genomes_project X 142560810 142606942 - MGP_WSBEiJ_P0096200 Il13ra2 protein_coding protein_coding MGP_WSBEiJ_T0096201.1 MGP_WSBEiJ_G0035266.1 mouse_genomes_project X 142560812 142581425 - MGP_WSBEiJ_P0096201 Il13ra2 protein_coding protein_coding MGP_WSBEiJ_T0094194.1 MGP_WSBEiJ_G0034669.1 mouse_genomes_project X 3912944 4024168 + MGP_WSBEiJ_P0094194 Lancl3 protein_coding protein_coding MGP_WSBEiJ_T0016141.1 MGP_WSBEiJ_G0014271.1 mouse_genomes_project X 116002822 116003995 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010990.1 MGP_WSBEiJ_G0009147.1 mouse_genomes_project X 67447149 67447229 - Mir105 miRNA miRNA MGP_WSBEiJ_T0095160.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69290606 69299551 - MGP_WSBEiJ_P0095160 Fam3a protein_coding protein_coding MGP_WSBEiJ_T0095161.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69290648 69299382 - MGP_WSBEiJ_P0095161 Fam3a protein_coding protein_coding MGP_WSBEiJ_T0095162.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69290648 69299282 - MGP_WSBEiJ_P0095162 Fam3a protein_coding protein_coding MGP_WSBEiJ_T0095163.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69291091 69299461 - MGP_WSBEiJ_P0095163 Fam3a protein_coding protein_coding MGP_WSBEiJ_T0095164.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69291189 69299382 - MGP_WSBEiJ_P0095164 Fam3a protein_coding protein_coding MGP_WSBEiJ_T0095165.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69292309 69299534 - MGP_WSBEiJ_P0095165 Fam3a protein_coding protein_coding MGP_WSBEiJ_T0095166.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69292519 69299382 - MGP_WSBEiJ_P0095166 Fam3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095167.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69292743 69293643 - Fam3a protein_coding retained_intron MGP_WSBEiJ_T0095168.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69292799 69299029 - MGP_WSBEiJ_P0095168 Fam3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095169.1 MGP_WSBEiJ_G0034949.1 mouse_genomes_project X 69292799 69298966 - MGP_WSBEiJ_P0095169 Fam3a protein_coding protein_coding MGP_WSBEiJ_T0094658.1 MGP_WSBEiJ_G0034822.1 mouse_genomes_project X 46612591 46616669 - MGP_WSBEiJ_P0094658 1700080O16Rik protein_coding protein_coding MGP_WSBEiJ_T0094659.1 MGP_WSBEiJ_G0034822.1 mouse_genomes_project X 46612788 46614944 - MGP_WSBEiJ_P0094659 1700080O16Rik protein_coding protein_coding MGP_WSBEiJ_T0099934.1 MGP_WSBEiJ_G0038597.1 mouse_genomes_project X 121903512 121903635 + Gm23586 snoRNA snoRNA MGP_WSBEiJ_T0011022.1 MGP_WSBEiJ_G0009179.1 mouse_genomes_project X 138164778 138164873 - Gm44351 miRNA miRNA MGP_WSBEiJ_T0015989.1 MGP_WSBEiJ_G0014119.1 mouse_genomes_project X 89477146 89477753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094631.1 MGP_WSBEiJ_G0034812.1 mouse_genomes_project X 44429484 44435196 - MGP_WSBEiJ_P0094631 Igsf1 protein_coding protein_coding MGP_WSBEiJ_T0094632.1 MGP_WSBEiJ_G0034812.1 mouse_genomes_project X 44429484 44445966 - MGP_WSBEiJ_P0094632 Igsf1 protein_coding protein_coding MGP_WSBEiJ_T0094633.1 MGP_WSBEiJ_G0034812.1 mouse_genomes_project X 44433294 44443582 - MGP_WSBEiJ_P0094633 Igsf1 protein_coding protein_coding MGP_WSBEiJ_T0094634.1 MGP_WSBEiJ_G0034812.1 mouse_genomes_project X 44441183 44445966 - MGP_WSBEiJ_P0094634 Igsf1 protein_coding protein_coding MGP_WSBEiJ_T0094635.1 MGP_WSBEiJ_G0034812.1 mouse_genomes_project X 44443162 44445952 - Igsf1 protein_coding processed_transcript MGP_WSBEiJ_T0095344.1 MGP_WSBEiJ_G0035007.1 mouse_genomes_project X 88161744 88163682 + Arx protein_coding retained_intron MGP_WSBEiJ_T0095345.1 MGP_WSBEiJ_G0035007.1 mouse_genomes_project X 88161795 88173606 + MGP_WSBEiJ_P0095345 Arx protein_coding protein_coding MGP_WSBEiJ_T0095346.1 MGP_WSBEiJ_G0035007.1 mouse_genomes_project X 88161809 88173311 + MGP_WSBEiJ_P0095346 Arx protein_coding protein_coding MGP_WSBEiJ_T0094347.1 MGP_WSBEiJ_G0034712.1 mouse_genomes_project X 15545045 15608745 - MGP_WSBEiJ_P0094347 Syn1 protein_coding protein_coding MGP_WSBEiJ_T0094348.1 MGP_WSBEiJ_G0034712.1 mouse_genomes_project X 15545049 15608659 - MGP_WSBEiJ_P0094348 Syn1 protein_coding protein_coding MGP_WSBEiJ_T0015773.1 MGP_WSBEiJ_G0013903.1 mouse_genomes_project X 41128138 41128546 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096187.1 MGP_WSBEiJ_G0035262.1 mouse_genomes_project X 139900078 140323736 + MGP_WSBEiJ_P0096187 Zcchc16 protein_coding protein_coding MGP_WSBEiJ_T0096188.1 MGP_WSBEiJ_G0035262.1 mouse_genomes_project X 140320825 140322583 + MGP_WSBEiJ_P0096188 Zcchc16 protein_coding protein_coding MGP_WSBEiJ_T0101129.1 MGP_WSBEiJ_G0039586.1 mouse_genomes_project X 3312184 3541857 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0096132.1 MGP_WSBEiJ_G0035247.1 mouse_genomes_project X 137085695 137086082 - MGP_WSBEiJ_P0096132 protein_coding protein_coding MGP_WSBEiJ_T0016123.1 MGP_WSBEiJ_G0014253.1 mouse_genomes_project X 112430771 112431864 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015986.1 MGP_WSBEiJ_G0014116.1 mouse_genomes_project X 89234731 89235632 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095898.1 MGP_WSBEiJ_G0035168.1 mouse_genomes_project X 129379450 129430649 + MGP_WSBEiJ_P0095898 Drp2 protein_coding protein_coding MGP_WSBEiJ_T0095899.1 MGP_WSBEiJ_G0035168.1 mouse_genomes_project X 129379527 129434510 + MGP_WSBEiJ_P0095899 Drp2 protein_coding protein_coding MGP_WSBEiJ_T0095900.1 MGP_WSBEiJ_G0035168.1 mouse_genomes_project X 129380418 129431555 + MGP_WSBEiJ_P0095900 Drp2 protein_coding protein_coding MGP_WSBEiJ_T0095901.1 MGP_WSBEiJ_G0035168.1 mouse_genomes_project X 129380436 129430956 + MGP_WSBEiJ_P0095901 Drp2 protein_coding protein_coding MGP_WSBEiJ_T0095902.1 MGP_WSBEiJ_G0035168.1 mouse_genomes_project X 129399642 129413380 + Drp2 protein_coding processed_transcript MGP_WSBEiJ_T0095903.1 MGP_WSBEiJ_G0035168.1 mouse_genomes_project X 129399696 129431349 + Drp2 protein_coding retained_intron MGP_WSBEiJ_T0094762.1 MGP_WSBEiJ_G0034862.1 mouse_genomes_project X 54886883 54919077 + MGP_WSBEiJ_P0094762 F9 protein_coding protein_coding MGP_WSBEiJ_T0018034.1 MGP_WSBEiJ_G0015200.1 mouse_genomes_project X 68665727 68668137 + Gm14817 processed_transcript processed_transcript MGP_WSBEiJ_T0016322.1 MGP_WSBEiJ_G0014452.1 mouse_genomes_project X 156964752 156965671 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016237.1 MGP_WSBEiJ_G0014367.1 mouse_genomes_project X 137984689 137985152 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016012.1 MGP_WSBEiJ_G0014142.1 mouse_genomes_project X 93337335 93337540 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015740.1 MGP_WSBEiJ_G0013870.1 mouse_genomes_project X 33818427 33818683 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098694.1 MGP_WSBEiJ_G0037357.1 mouse_genomes_project X 105730472 105730663 - Gm26108 snRNA snRNA MGP_WSBEiJ_T0095751.1 MGP_WSBEiJ_G0035116.1 mouse_genomes_project X 102836772 102859701 + MGP_WSBEiJ_P0095751 Tbx22 protein_coding protein_coding MGP_WSBEiJ_T0095752.1 MGP_WSBEiJ_G0035116.1 mouse_genomes_project X 102836772 102850503 + MGP_WSBEiJ_P0095752 Tbx22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095753.1 MGP_WSBEiJ_G0035116.1 mouse_genomes_project X 102845837 102857058 + MGP_WSBEiJ_P0095753 Tbx22 protein_coding protein_coding MGP_WSBEiJ_T0095754.1 MGP_WSBEiJ_G0035116.1 mouse_genomes_project X 102848292 102859704 + MGP_WSBEiJ_P0095754 Tbx22 protein_coding protein_coding MGP_WSBEiJ_T0095755.1 MGP_WSBEiJ_G0035116.1 mouse_genomes_project X 102848344 102857783 + MGP_WSBEiJ_P0095755 Tbx22 protein_coding protein_coding MGP_WSBEiJ_T0096269.1 MGP_WSBEiJ_G0035275.1 mouse_genomes_project X 146382633 146428522 + MGP_WSBEiJ_P0096269 Fgd1 protein_coding protein_coding MGP_WSBEiJ_T0096270.1 MGP_WSBEiJ_G0035275.1 mouse_genomes_project X 146383654 146428522 + MGP_WSBEiJ_P0096270 Fgd1 protein_coding protein_coding MGP_WSBEiJ_T0096271.1 MGP_WSBEiJ_G0035275.1 mouse_genomes_project X 146406053 146408339 + Fgd1 protein_coding retained_intron MGP_WSBEiJ_T0096272.1 MGP_WSBEiJ_G0035275.1 mouse_genomes_project X 146425110 146426182 + Fgd1 protein_coding retained_intron MGP_WSBEiJ_T0016302.1 MGP_WSBEiJ_G0014432.1 mouse_genomes_project X 153106429 153106763 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015922.1 MGP_WSBEiJ_G0014052.1 mouse_genomes_project X 75648507 75648640 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016190.1 MGP_WSBEiJ_G0014320.1 mouse_genomes_project X 131674787 131675416 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098710.1 MGP_WSBEiJ_G0037373.1 mouse_genomes_project X 146603879 146603983 - Gm26441 snRNA snRNA MGP_WSBEiJ_T0094333.1 MGP_WSBEiJ_G0034710.1 mouse_genomes_project X 15376065 15392913 + MGP_WSBEiJ_P0094333 Usp11 protein_coding protein_coding MGP_WSBEiJ_T0094334.1 MGP_WSBEiJ_G0034710.1 mouse_genomes_project X 15376093 15385313 + Usp11 protein_coding processed_transcript MGP_WSBEiJ_T0094335.1 MGP_WSBEiJ_G0034710.1 mouse_genomes_project X 15376119 15390059 + Usp11 protein_coding retained_intron MGP_WSBEiJ_T0094336.1 MGP_WSBEiJ_G0034710.1 mouse_genomes_project X 15383984 15392911 + Usp11 protein_coding retained_intron MGP_WSBEiJ_T0015677.1 MGP_WSBEiJ_G0013807.1 mouse_genomes_project X 6441781 6441904 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009295.1 MGP_WSBEiJ_G0007460.1 mouse_genomes_project X 162324240 162332491 - Gm15230 lincRNA lincRNA MGP_WSBEiJ_T0011562.1 MGP_WSBEiJ_G0009719.1 mouse_genomes_project X 95643839 95644167 + Gm22160 misc_RNA misc_RNA MGP_WSBEiJ_T0016267.1 MGP_WSBEiJ_G0014397.1 mouse_genomes_project X 146012306 146013206 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095269.1 MGP_WSBEiJ_G0034977.1 mouse_genomes_project X 72740994 72748410 + MGP_WSBEiJ_P0095269 protein_coding protein_coding MGP_WSBEiJ_T0099933.1 MGP_WSBEiJ_G0038596.1 mouse_genomes_project X 116701835 116701971 + Gm23277 snoRNA snoRNA MGP_WSBEiJ_T0011565.1 MGP_WSBEiJ_G0009722.1 mouse_genomes_project X 98539602 98539683 + Gm27520 misc_RNA misc_RNA MGP_WSBEiJ_T0095995.1 MGP_WSBEiJ_G0035199.1 mouse_genomes_project X 131303261 131306041 + MGP_WSBEiJ_P0095995 Wbp5 protein_coding protein_coding MGP_WSBEiJ_T0095996.1 MGP_WSBEiJ_G0035199.1 mouse_genomes_project X 131303865 131306041 + MGP_WSBEiJ_P0095996 Wbp5 protein_coding protein_coding MGP_WSBEiJ_T0095433.1 MGP_WSBEiJ_G0035029.1 mouse_genomes_project X 91374657 91492475 + MGP_WSBEiJ_P0095433 Heph protein_coding protein_coding MGP_WSBEiJ_T0095434.1 MGP_WSBEiJ_G0035029.1 mouse_genomes_project X 91375671 91450142 + MGP_WSBEiJ_P0095434 Heph protein_coding protein_coding MGP_WSBEiJ_T0095435.1 MGP_WSBEiJ_G0035029.1 mouse_genomes_project X 91375688 91492472 + MGP_WSBEiJ_P0095435 Heph protein_coding protein_coding MGP_WSBEiJ_T0095436.1 MGP_WSBEiJ_G0035029.1 mouse_genomes_project X 91375726 91394865 + Heph protein_coding retained_intron MGP_WSBEiJ_T0095437.1 MGP_WSBEiJ_G0035029.1 mouse_genomes_project X 91375726 91408102 + Heph protein_coding retained_intron MGP_WSBEiJ_T0095085.1 MGP_WSBEiJ_G0034940.1 mouse_genomes_project X 69171831 69180327 - MGP_WSBEiJ_P0095085 Dnase1l1 protein_coding protein_coding MGP_WSBEiJ_T0095086.1 MGP_WSBEiJ_G0034940.1 mouse_genomes_project X 69171832 69180928 - MGP_WSBEiJ_P0095086 Dnase1l1 protein_coding protein_coding MGP_WSBEiJ_T0095087.1 MGP_WSBEiJ_G0034940.1 mouse_genomes_project X 69171933 69180189 - MGP_WSBEiJ_P0095087 Dnase1l1 protein_coding protein_coding MGP_WSBEiJ_T0095088.1 MGP_WSBEiJ_G0034940.1 mouse_genomes_project X 69172587 69180266 - MGP_WSBEiJ_P0095088 Dnase1l1 protein_coding protein_coding MGP_WSBEiJ_T0095089.1 MGP_WSBEiJ_G0034940.1 mouse_genomes_project X 69172982 69175484 - Dnase1l1 protein_coding retained_intron MGP_WSBEiJ_T0095090.1 MGP_WSBEiJ_G0034940.1 mouse_genomes_project X 69175422 69180217 - Dnase1l1 protein_coding retained_intron MGP_WSBEiJ_T0015905.1 MGP_WSBEiJ_G0014035.1 mouse_genomes_project X 72174892 72175871 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095224.1 MGP_WSBEiJ_G0034960.1 mouse_genomes_project X 70101414 70296863 - MGP_WSBEiJ_P0095224 protein_coding unknown_likely_coding MGP_WSBEiJ_T0095225.1 MGP_WSBEiJ_G0034960.1 mouse_genomes_project X 70103785 70299547 - MGP_WSBEiJ_P0095225 protein_coding protein_coding MGP_WSBEiJ_T0095226.1 MGP_WSBEiJ_G0034960.1 mouse_genomes_project X 70103789 70297272 - MGP_WSBEiJ_P0095226 protein_coding protein_coding MGP_WSBEiJ_T0095227.1 MGP_WSBEiJ_G0034960.1 mouse_genomes_project X 70261580 70299848 - MGP_WSBEiJ_P0095227 protein_coding protein_coding MGP_WSBEiJ_T0095228.1 MGP_WSBEiJ_G0034960.1 mouse_genomes_project X 70271294 70299522 - MGP_WSBEiJ_P0095228 protein_coding protein_coding MGP_WSBEiJ_T0095285.1 MGP_WSBEiJ_G0034984.1 mouse_genomes_project X 73607124 73608763 + MGP_WSBEiJ_P0095285 Fam47c protein_coding protein_coding MGP_WSBEiJ_T0002435.1 MGP_WSBEiJ_G0002351.1 mouse_genomes_project X 98854700 98856711 - TEC TEC MGP_WSBEiJ_T0096325.1 MGP_WSBEiJ_G0035283.1 mouse_genomes_project X 147350001 147369940 + MGP_WSBEiJ_P0096325 Smc1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096326.1 MGP_WSBEiJ_G0035283.1 mouse_genomes_project X 147350001 147397039 + MGP_WSBEiJ_P0096326 Smc1a protein_coding protein_coding MGP_WSBEiJ_T0096327.1 MGP_WSBEiJ_G0035283.1 mouse_genomes_project X 147370174 147371785 + Smc1a protein_coding retained_intron MGP_WSBEiJ_T0096328.1 MGP_WSBEiJ_G0035283.1 mouse_genomes_project X 147380984 147382292 + Smc1a protein_coding retained_intron MGP_WSBEiJ_T0096329.1 MGP_WSBEiJ_G0035283.1 mouse_genomes_project X 147392810 147393852 + Smc1a protein_coding retained_intron MGP_WSBEiJ_T0096330.1 MGP_WSBEiJ_G0035283.1 mouse_genomes_project X 147393418 147394124 + Smc1a protein_coding retained_intron MGP_WSBEiJ_T0094927.1 MGP_WSBEiJ_G0034919.1 mouse_genomes_project X 68551641 68581558 - MGP_WSBEiJ_P0094927 Bcap31 protein_coding protein_coding MGP_WSBEiJ_T0015772.1 MGP_WSBEiJ_G0013902.1 mouse_genomes_project X 40770982 40772515 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018004.1 MGP_WSBEiJ_G0015191.1 mouse_genomes_project X 13868469 13879132 - Gm14636 processed_transcript processed_transcript MGP_WSBEiJ_T0018005.1 MGP_WSBEiJ_G0015191.1 mouse_genomes_project X 13873956 13879141 - Gm14636 processed_transcript processed_transcript MGP_WSBEiJ_T0098661.1 MGP_WSBEiJ_G0037324.1 mouse_genomes_project X 31765318 31765427 - Gm26099 snRNA snRNA MGP_WSBEiJ_T0094020.1 MGP_WSBEiJ_G0034621.1 mouse_genomes_project X 2258256 2269775 + MGP_WSBEiJ_P0094020 Prickle3 protein_coding protein_coding MGP_WSBEiJ_T0094021.1 MGP_WSBEiJ_G0034621.1 mouse_genomes_project X 2258468 2262125 + Prickle3 protein_coding retained_intron MGP_WSBEiJ_T0094022.1 MGP_WSBEiJ_G0034621.1 mouse_genomes_project X 2259529 2270028 + MGP_WSBEiJ_P0094022 Prickle3 protein_coding protein_coding MGP_WSBEiJ_T0094023.1 MGP_WSBEiJ_G0034621.1 mouse_genomes_project X 2263747 2269775 + Prickle3 protein_coding retained_intron MGP_WSBEiJ_T0094024.1 MGP_WSBEiJ_G0034621.1 mouse_genomes_project X 2267939 2268979 + Prickle3 protein_coding retained_intron MGP_WSBEiJ_T0016059.1 MGP_WSBEiJ_G0014189.1 mouse_genomes_project X 100140792 100141573 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096596.1 MGP_WSBEiJ_G0035356.1 mouse_genomes_project X 161617233 161637308 + MGP_WSBEiJ_P0096596 Gemin8 protein_coding protein_coding MGP_WSBEiJ_T0096597.1 MGP_WSBEiJ_G0035356.1 mouse_genomes_project X 161617233 161636684 + MGP_WSBEiJ_P0096597 Gemin8 protein_coding protein_coding MGP_WSBEiJ_T0096598.1 MGP_WSBEiJ_G0035356.1 mouse_genomes_project X 161617274 161637306 + MGP_WSBEiJ_P0096598 Gemin8 protein_coding protein_coding MGP_WSBEiJ_T0096599.1 MGP_WSBEiJ_G0035356.1 mouse_genomes_project X 161624941 161627302 + MGP_WSBEiJ_P0096599 Gemin8 protein_coding protein_coding MGP_WSBEiJ_T0096600.1 MGP_WSBEiJ_G0035356.1 mouse_genomes_project X 161624962 161635852 + MGP_WSBEiJ_P0096600 Gemin8 protein_coding protein_coding MGP_WSBEiJ_T0005525.1 MGP_WSBEiJ_G0004653.1 mouse_genomes_project X 98488120 98543615 + Tsix antisense antisense MGP_WSBEiJ_T0098686.1 MGP_WSBEiJ_G0037349.1 mouse_genomes_project X 99103000 99103107 - Gm23378 snRNA snRNA MGP_WSBEiJ_T0096027.1 MGP_WSBEiJ_G0035214.1 mouse_genomes_project X 132119070 132122276 + MGP_WSBEiJ_P0096027 Zcchc18 protein_coding protein_coding MGP_WSBEiJ_T0096028.1 MGP_WSBEiJ_G0035214.1 mouse_genomes_project X 132119074 132122014 + MGP_WSBEiJ_P0096028 Zcchc18 protein_coding protein_coding MGP_WSBEiJ_T0096029.1 MGP_WSBEiJ_G0035214.1 mouse_genomes_project X 132119213 132124373 + MGP_WSBEiJ_P0096029 Zcchc18 protein_coding protein_coding MGP_WSBEiJ_T0095296.1 MGP_WSBEiJ_G0034987.1 mouse_genomes_project X 75784183 75809466 + Tmem47 protein_coding processed_transcript MGP_WSBEiJ_T0095297.1 MGP_WSBEiJ_G0034987.1 mouse_genomes_project X 75784190 75810421 + MGP_WSBEiJ_P0095297 Tmem47 protein_coding protein_coding MGP_WSBEiJ_T0095298.1 MGP_WSBEiJ_G0034987.1 mouse_genomes_project X 75784201 75812651 + MGP_WSBEiJ_P0095298 Tmem47 protein_coding protein_coding MGP_WSBEiJ_T0094530.1 MGP_WSBEiJ_G0034783.1 mouse_genomes_project X 36818083 36948806 + MGP_WSBEiJ_P0094530 Stag2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0094531.1 MGP_WSBEiJ_G0034783.1 mouse_genomes_project X 36818228 36950706 + MGP_WSBEiJ_P0094531 Stag2 protein_coding protein_coding MGP_WSBEiJ_T0094532.1 MGP_WSBEiJ_G0034783.1 mouse_genomes_project X 36818357 36884751 + Stag2 protein_coding retained_intron MGP_WSBEiJ_T0094533.1 MGP_WSBEiJ_G0034783.1 mouse_genomes_project X 36818499 36878248 + MGP_WSBEiJ_P0094533 Stag2 protein_coding protein_coding MGP_WSBEiJ_T0094534.1 MGP_WSBEiJ_G0034783.1 mouse_genomes_project X 36818971 36883490 + Stag2 protein_coding processed_transcript MGP_WSBEiJ_T0094535.1 MGP_WSBEiJ_G0034783.1 mouse_genomes_project X 36821555 36950716 + MGP_WSBEiJ_P0094535 Stag2 protein_coding protein_coding MGP_WSBEiJ_T0094536.1 MGP_WSBEiJ_G0034783.1 mouse_genomes_project X 36821868 36878251 + MGP_WSBEiJ_P0094536 Stag2 protein_coding protein_coding MGP_WSBEiJ_T0094537.1 MGP_WSBEiJ_G0034783.1 mouse_genomes_project X 36823034 36893122 + MGP_WSBEiJ_P0094537 Stag2 protein_coding protein_coding MGP_WSBEiJ_T0096540.1 MGP_WSBEiJ_G0035339.1 mouse_genomes_project X 159284335 159285526 - MGP_WSBEiJ_P0096540 Rnf138rt1 protein_coding protein_coding MGP_WSBEiJ_T0016300.1 MGP_WSBEiJ_G0014430.1 mouse_genomes_project X 153055914 153056347 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099904.1 MGP_WSBEiJ_G0038567.1 mouse_genomes_project X 32235606 32235750 + snoRNA snoRNA MGP_WSBEiJ_T0095511.1 MGP_WSBEiJ_G0035051.1 mouse_genomes_project X 95623983 95626596 + Gdpd2 protein_coding processed_transcript MGP_WSBEiJ_T0095512.1 MGP_WSBEiJ_G0035051.1 mouse_genomes_project X 95624048 95629360 + Gdpd2 protein_coding retained_intron MGP_WSBEiJ_T0095513.1 MGP_WSBEiJ_G0035051.1 mouse_genomes_project X 95624052 95633038 + MGP_WSBEiJ_P0095513 Gdpd2 protein_coding protein_coding MGP_WSBEiJ_T0095514.1 MGP_WSBEiJ_G0035051.1 mouse_genomes_project X 95624296 95633038 + MGP_WSBEiJ_P0095514 Gdpd2 protein_coding protein_coding MGP_WSBEiJ_T0095515.1 MGP_WSBEiJ_G0035051.1 mouse_genomes_project X 95630486 95633039 + Gdpd2 protein_coding retained_intron MGP_WSBEiJ_T0100175.1 MGP_WSBEiJ_G0038746.1 mouse_genomes_project X 17156861 17157624 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100176.1 MGP_WSBEiJ_G0038746.1 mouse_genomes_project X 17156958 17157567 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0015732.1 MGP_WSBEiJ_G0013862.1 mouse_genomes_project X 31356314 31357111 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010995.1 MGP_WSBEiJ_G0009152.1 mouse_genomes_project X 69219000 69219068 + Mir7092 miRNA miRNA MGP_WSBEiJ_T0015953.1 MGP_WSBEiJ_G0014083.1 mouse_genomes_project X 83849835 83851001 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094205.1 MGP_WSBEiJ_G0034673.1 mouse_genomes_project X 4596043 4596624 + MGP_WSBEiJ_P0094205 Hypm protein_coding protein_coding MGP_WSBEiJ_T0010981.1 MGP_WSBEiJ_G0009138.1 mouse_genomes_project X 61693202 61693276 - Mir465c-1 miRNA miRNA MGP_WSBEiJ_T0015743.1 MGP_WSBEiJ_G0013873.1 mouse_genomes_project X 34443632 34444023 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005497.1 MGP_WSBEiJ_G0004629.1 mouse_genomes_project X 31508745 31511159 + Gm14549 antisense antisense MGP_WSBEiJ_T0010983.1 MGP_WSBEiJ_G0009140.1 mouse_genomes_project X 62796372 62796438 - Mir201 miRNA miRNA MGP_WSBEiJ_T0015786.1 MGP_WSBEiJ_G0013916.1 mouse_genomes_project X 44961547 44962427 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016333.1 MGP_WSBEiJ_G0014463.1 mouse_genomes_project X 159302640 159302856 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016156.1 MGP_WSBEiJ_G0014286.1 mouse_genomes_project X 123292978 123293642 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015813.1 MGP_WSBEiJ_G0013943.1 mouse_genomes_project X 52617411 52619532 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016132.1 MGP_WSBEiJ_G0014262.1 mouse_genomes_project X 113272996 113274801 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099921.1 MGP_WSBEiJ_G0038584.1 mouse_genomes_project X 77063540 77063677 - Gm24706 snoRNA snoRNA MGP_WSBEiJ_T0016081.1 MGP_WSBEiJ_G0014211.1 mouse_genomes_project X 103238444 103243267 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005488.1 MGP_WSBEiJ_G0004625.1 mouse_genomes_project X 2252428 2258255 - Gm14703 antisense antisense MGP_WSBEiJ_T0095622.1 MGP_WSBEiJ_G0035074.1 mouse_genomes_project X 97124646 97129723 - MGP_WSBEiJ_P0095622 Rps4x protein_coding protein_coding MGP_WSBEiJ_T0095623.1 MGP_WSBEiJ_G0035074.1 mouse_genomes_project X 97124781 97127065 - Rps4x protein_coding retained_intron MGP_WSBEiJ_T0095624.1 MGP_WSBEiJ_G0035074.1 mouse_genomes_project X 97127954 97129665 - Rps4x protein_coding retained_intron MGP_WSBEiJ_T0016154.1 MGP_WSBEiJ_G0014284.1 mouse_genomes_project X 121971680 121972044 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095985.1 MGP_WSBEiJ_G0035193.1 mouse_genomes_project X 131114649 131116322 - MGP_WSBEiJ_P0095985 Bex2 protein_coding protein_coding MGP_WSBEiJ_T0016252.1 MGP_WSBEiJ_G0014382.1 mouse_genomes_project X 140848014 140848977 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094001.1 MGP_WSBEiJ_G0034618.1 mouse_genomes_project X 2191931 2203629 - MGP_WSBEiJ_P0094001 Ccdc22 protein_coding protein_coding MGP_WSBEiJ_T0094002.1 MGP_WSBEiJ_G0034618.1 mouse_genomes_project X 2191932 2195402 - Ccdc22 protein_coding retained_intron MGP_WSBEiJ_T0095656.1 MGP_WSBEiJ_G0035086.1 mouse_genomes_project X 98411378 98451218 + MGP_WSBEiJ_P0095656 Chic1 protein_coding protein_coding MGP_WSBEiJ_T0096614.1 MGP_WSBEiJ_G0035359.1 mouse_genomes_project X 161887162 161899730 + MGP_WSBEiJ_P0096614 Trappc2 protein_coding protein_coding MGP_WSBEiJ_T0096615.1 MGP_WSBEiJ_G0035359.1 mouse_genomes_project X 161887364 161898568 + Trappc2 protein_coding retained_intron MGP_WSBEiJ_T0096616.1 MGP_WSBEiJ_G0035359.1 mouse_genomes_project X 161887364 161899728 + MGP_WSBEiJ_P0096616 Trappc2 protein_coding protein_coding MGP_WSBEiJ_T0096617.1 MGP_WSBEiJ_G0035359.1 mouse_genomes_project X 161891895 161899730 + MGP_WSBEiJ_P0096617 Trappc2 protein_coding protein_coding MGP_WSBEiJ_T0096426.1 MGP_WSBEiJ_G0035314.1 mouse_genomes_project X 153256104 153486693 - MGP_WSBEiJ_P0096426 Cnksr2 protein_coding protein_coding MGP_WSBEiJ_T0096427.1 MGP_WSBEiJ_G0035314.1 mouse_genomes_project X 153267404 153486693 - MGP_WSBEiJ_P0096427 Cnksr2 protein_coding protein_coding MGP_WSBEiJ_T0096428.1 MGP_WSBEiJ_G0035314.1 mouse_genomes_project X 153293474 153301890 - Cnksr2 protein_coding retained_intron MGP_WSBEiJ_T0094193.1 MGP_WSBEiJ_G0034668.1 mouse_genomes_project X 3810311 3812092 + MGP_WSBEiJ_P0094193 4930402K13Rik protein_coding protein_coding MGP_WSBEiJ_T0098690.1 MGP_WSBEiJ_G0037353.1 mouse_genomes_project X 101760387 101760549 - Gm24622 snRNA snRNA MGP_WSBEiJ_T0015900.1 MGP_WSBEiJ_G0014030.1 mouse_genomes_project X 71356730 71357034 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016189.1 MGP_WSBEiJ_G0014319.1 mouse_genomes_project X 131190649 131191002 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016151.1 MGP_WSBEiJ_G0014281.1 mouse_genomes_project X 121621238 121621741 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098673.1 MGP_WSBEiJ_G0037336.1 mouse_genomes_project X 55136605 55136712 + Gm22287 snRNA snRNA MGP_WSBEiJ_T0016348.1 MGP_WSBEiJ_G0014478.1 mouse_genomes_project X 163250879 163252175 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097151.1 MGP_WSBEiJ_G0035832.1 mouse_genomes_project X 147317959 147318066 + n-R5s14 rRNA rRNA MGP_WSBEiJ_T0016118.1 MGP_WSBEiJ_G0014248.1 mouse_genomes_project X 110833991 110834845 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096872.1 MGP_WSBEiJ_G0035553.1 mouse_genomes_project X 45835931 45837038 - pseudogene pseudogene MGP_WSBEiJ_T0016092.1 MGP_WSBEiJ_G0014222.1 mouse_genomes_project X 106966556 106967103 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096019.1 MGP_WSBEiJ_G0035211.1 mouse_genomes_project X 132074795 132081112 - MGP_WSBEiJ_P0096019 protein_coding protein_coding MGP_WSBEiJ_T0095810.1 MGP_WSBEiJ_G0035137.1 mouse_genomes_project X 108131466 108319987 - MGP_WSBEiJ_P0095810 Chm protein_coding protein_coding MGP_WSBEiJ_T0095811.1 MGP_WSBEiJ_G0035137.1 mouse_genomes_project X 108134056 108138451 - Chm protein_coding processed_transcript MGP_WSBEiJ_T0095812.1 MGP_WSBEiJ_G0035137.1 mouse_genomes_project X 108155076 108285127 - Chm protein_coding processed_transcript MGP_WSBEiJ_T0095813.1 MGP_WSBEiJ_G0035137.1 mouse_genomes_project X 108216945 108285127 - Chm protein_coding processed_transcript MGP_WSBEiJ_T0095471.1 MGP_WSBEiJ_G0035039.1 mouse_genomes_project X 94363423 94368944 - MGP_WSBEiJ_P0095471 Pja1 protein_coding protein_coding MGP_WSBEiJ_T0095472.1 MGP_WSBEiJ_G0035039.1 mouse_genomes_project X 94363427 94368379 - MGP_WSBEiJ_P0095472 Pja1 protein_coding protein_coding MGP_WSBEiJ_T0095473.1 MGP_WSBEiJ_G0035039.1 mouse_genomes_project X 94363457 94368427 - MGP_WSBEiJ_P0095473 Pja1 protein_coding protein_coding MGP_WSBEiJ_T0095474.1 MGP_WSBEiJ_G0035039.1 mouse_genomes_project X 94363804 94368384 - MGP_WSBEiJ_P0095474 Pja1 protein_coding protein_coding MGP_WSBEiJ_T0095475.1 MGP_WSBEiJ_G0035039.1 mouse_genomes_project X 94363836 94368364 - MGP_WSBEiJ_P0095475 Pja1 protein_coding protein_coding MGP_WSBEiJ_T0015880.1 MGP_WSBEiJ_G0014010.1 mouse_genomes_project X 65601718 65602323 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097146.1 MGP_WSBEiJ_G0035827.1 mouse_genomes_project X 81155922 81156041 - n-R5s10 rRNA rRNA MGP_WSBEiJ_T0011017.1 MGP_WSBEiJ_G0009174.1 mouse_genomes_project X 130776067 130776121 + Mir7646 miRNA miRNA MGP_WSBEiJ_T0016263.1 MGP_WSBEiJ_G0014393.1 mouse_genomes_project X 142118654 142120139 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099953.1 MGP_WSBEiJ_G0038616.1 mouse_genomes_project X 158241309 158241428 + Gm23786 snoRNA snoRNA MGP_WSBEiJ_T0016216.1 MGP_WSBEiJ_G0014346.1 mouse_genomes_project X 136016304 136016890 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094396.1 MGP_WSBEiJ_G0034730.1 mouse_genomes_project X 30785527 30844625 + MGP_WSBEiJ_P0094396 Il13ra1 protein_coding protein_coding MGP_WSBEiJ_T0099912.1 MGP_WSBEiJ_G0038575.1 mouse_genomes_project X 65527497 65527629 + Gm22785 snoRNA snoRNA MGP_WSBEiJ_T0095286.1 MGP_WSBEiJ_G0034985.1 mouse_genomes_project X 74013173 74299365 - MGP_WSBEiJ_P0095286 Gm7173 protein_coding unknown_likely_coding MGP_WSBEiJ_T0095287.1 MGP_WSBEiJ_G0034985.1 mouse_genomes_project X 74053061 74301036 - MGP_WSBEiJ_P0095287 Gm7173 protein_coding protein_coding MGP_WSBEiJ_T0095288.1 MGP_WSBEiJ_G0034985.1 mouse_genomes_project X 74053074 74301170 - MGP_WSBEiJ_P0095288 Gm7173 protein_coding unknown_likely_coding MGP_WSBEiJ_T0095289.1 MGP_WSBEiJ_G0034985.1 mouse_genomes_project X 74109555 74128388 - Gm7173 protein_coding retained_intron MGP_WSBEiJ_T0095290.1 MGP_WSBEiJ_G0034985.1 mouse_genomes_project X 74109753 74137385 - MGP_WSBEiJ_P0095290 Gm7173 protein_coding protein_coding MGP_WSBEiJ_T0095291.1 MGP_WSBEiJ_G0034985.1 mouse_genomes_project X 74123824 74137494 - Gm7173 protein_coding processed_transcript MGP_WSBEiJ_T0095292.1 MGP_WSBEiJ_G0034985.1 mouse_genomes_project X 74181013 74212238 - MGP_WSBEiJ_P0095292 Gm7173 protein_coding protein_coding MGP_WSBEiJ_T0095293.1 MGP_WSBEiJ_G0034985.1 mouse_genomes_project X 74265573 74301036 - MGP_WSBEiJ_P0095293 Gm7173 protein_coding protein_coding MGP_WSBEiJ_T0095256.1 MGP_WSBEiJ_G0034968.1 mouse_genomes_project X 71227082 71230361 + MGP_WSBEiJ_P0095256 protein_coding protein_coding MGP_WSBEiJ_T0016017.1 MGP_WSBEiJ_G0014147.1 mouse_genomes_project X 94601417 94601711 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009281.1 MGP_WSBEiJ_G0007452.1 mouse_genomes_project X 146174416 146174957 - Gm27191 lincRNA lincRNA MGP_WSBEiJ_T0095543.1 MGP_WSBEiJ_G0035058.1 mouse_genomes_project X 96158779 96166371 - MGP_WSBEiJ_P0095543 Gm20489 protein_coding protein_coding MGP_WSBEiJ_T0010945.1 MGP_WSBEiJ_G0009102.1 mouse_genomes_project X 43347972 43348091 + Gm27828 miRNA miRNA MGP_WSBEiJ_T0016346.1 MGP_WSBEiJ_G0014476.1 mouse_genomes_project X 162500130 162500665 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096079.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 134973873 135024419 - MGP_WSBEiJ_P0096079 Morc4 protein_coding protein_coding MGP_WSBEiJ_T0096080.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 134974145 135024442 - MGP_WSBEiJ_P0096080 Morc4 protein_coding protein_coding MGP_WSBEiJ_T0096081.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 134974915 135010684 - MGP_WSBEiJ_P0096081 Morc4 protein_coding protein_coding MGP_WSBEiJ_T0096082.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 134976471 134988340 - Morc4 protein_coding retained_intron MGP_WSBEiJ_T0096083.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 134988725 135007332 - MGP_WSBEiJ_P0096083 Morc4 protein_coding protein_coding MGP_WSBEiJ_T0096084.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 135008741 135024390 - Morc4 protein_coding retained_intron MGP_WSBEiJ_T0096085.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 135008748 135024387 - Morc4 protein_coding processed_transcript MGP_WSBEiJ_T0096086.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 135011555 135024175 - Morc4 protein_coding retained_intron MGP_WSBEiJ_T0096087.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 135011589 135024138 - MGP_WSBEiJ_P0096087 Morc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096088.1 MGP_WSBEiJ_G0035232.1 mouse_genomes_project X 135011703 135023964 - MGP_WSBEiJ_P0096088 Morc4 protein_coding protein_coding MGP_WSBEiJ_T0095370.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89147986 89151541 + Klhl15 protein_coding processed_transcript MGP_WSBEiJ_T0095371.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89147991 89167274 + MGP_WSBEiJ_P0095371 Klhl15 protein_coding protein_coding MGP_WSBEiJ_T0095372.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89148314 89168597 + MGP_WSBEiJ_P0095372 Klhl15 protein_coding protein_coding MGP_WSBEiJ_T0095373.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89148317 89187592 + MGP_WSBEiJ_P0095373 Klhl15 protein_coding protein_coding MGP_WSBEiJ_T0095374.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89148374 89170494 + MGP_WSBEiJ_P0095374 Klhl15 protein_coding protein_coding MGP_WSBEiJ_T0095375.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89148377 89186819 + Klhl15 protein_coding retained_intron MGP_WSBEiJ_T0095376.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89148377 89168601 + MGP_WSBEiJ_P0095376 Klhl15 protein_coding protein_coding MGP_WSBEiJ_T0095377.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89148698 89187586 + MGP_WSBEiJ_P0095377 Klhl15 protein_coding protein_coding MGP_WSBEiJ_T0095378.1 MGP_WSBEiJ_G0035014.1 mouse_genomes_project X 89149193 89191792 + MGP_WSBEiJ_P0095378 Klhl15 protein_coding protein_coding MGP_WSBEiJ_T0015990.1 MGP_WSBEiJ_G0014120.1 mouse_genomes_project X 89488211 89488620 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098675.1 MGP_WSBEiJ_G0037338.1 mouse_genomes_project X 61601863 61601978 + Gm23000 snRNA snRNA MGP_WSBEiJ_T0016115.1 MGP_WSBEiJ_G0014245.1 mouse_genomes_project X 110486289 110486922 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015906.1 MGP_WSBEiJ_G0014036.1 mouse_genomes_project X 72177834 72178362 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015939.1 MGP_WSBEiJ_G0014069.1 mouse_genomes_project X 80744756 80745270 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094383.1 MGP_WSBEiJ_G0034726.1 mouse_genomes_project X 18364462 18475524 + MGP_WSBEiJ_P0094383 protein_coding protein_coding MGP_WSBEiJ_T0094384.1 MGP_WSBEiJ_G0034726.1 mouse_genomes_project X 18364488 18422115 + protein_coding retained_intron MGP_WSBEiJ_T0094385.1 MGP_WSBEiJ_G0034726.1 mouse_genomes_project X 18364507 18475559 + MGP_WSBEiJ_P0094385 protein_coding protein_coding MGP_WSBEiJ_T0094386.1 MGP_WSBEiJ_G0034726.1 mouse_genomes_project X 18364570 18427445 + MGP_WSBEiJ_P0094386 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094387.1 MGP_WSBEiJ_G0034726.1 mouse_genomes_project X 18446167 18450871 + protein_coding retained_intron MGP_WSBEiJ_T0096381.1 MGP_WSBEiJ_G0035301.1 mouse_genomes_project X 149882483 149885164 + MGP_WSBEiJ_P0096381 Samt4 protein_coding protein_coding MGP_WSBEiJ_T0094888.1 MGP_WSBEiJ_G0034908.1 mouse_genomes_project X 68145391 68152512 + MGP_WSBEiJ_P0094888 protein_coding protein_coding MGP_WSBEiJ_T0016230.1 MGP_WSBEiJ_G0014360.1 mouse_genomes_project X 137412484 137413426 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096163.1 MGP_WSBEiJ_G0035258.1 mouse_genomes_project X 139022920 139048116 - MGP_WSBEiJ_P0096163 Capn6 protein_coding protein_coding MGP_WSBEiJ_T0096164.1 MGP_WSBEiJ_G0035258.1 mouse_genomes_project X 139036765 139048034 - Capn6 protein_coding retained_intron MGP_WSBEiJ_T0094856.1 MGP_WSBEiJ_G0034894.1 mouse_genomes_project X 66777789 66795033 + MGP_WSBEiJ_P0094856 Gm1141 protein_coding protein_coding MGP_WSBEiJ_T0094857.1 MGP_WSBEiJ_G0034894.1 mouse_genomes_project X 66783453 66791089 + MGP_WSBEiJ_P0094857 Gm1141 protein_coding protein_coding MGP_WSBEiJ_T0010988.1 MGP_WSBEiJ_G0009145.1 mouse_genomes_project X 67115506 67115591 - Mir452 miRNA miRNA MGP_WSBEiJ_T0099928.1 MGP_WSBEiJ_G0038591.1 mouse_genomes_project X 99730346 99730453 + Gm22430 snoRNA snoRNA MGP_WSBEiJ_T0015863.1 MGP_WSBEiJ_G0013993.1 mouse_genomes_project X 62467550 62468332 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095080.1 MGP_WSBEiJ_G0034939.1 mouse_genomes_project X 69163306 69165297 + protein_coding processed_transcript MGP_WSBEiJ_T0095081.1 MGP_WSBEiJ_G0034939.1 mouse_genomes_project X 69163404 69164726 + protein_coding retained_intron MGP_WSBEiJ_T0095082.1 MGP_WSBEiJ_G0034939.1 mouse_genomes_project X 69163434 69165459 + protein_coding retained_intron MGP_WSBEiJ_T0095083.1 MGP_WSBEiJ_G0034939.1 mouse_genomes_project X 69163857 69171659 + protein_coding retained_intron MGP_WSBEiJ_T0095084.1 MGP_WSBEiJ_G0034939.1 mouse_genomes_project X 69164722 69165340 + protein_coding retained_intron MGP_WSBEiJ_T0096425.1 MGP_WSBEiJ_G0035313.1 mouse_genomes_project X 153253103 153255038 + MGP_WSBEiJ_P0096425 Klhl34 protein_coding protein_coding MGP_WSBEiJ_T0015909.1 MGP_WSBEiJ_G0014039.1 mouse_genomes_project X 72629682 72630451 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016089.1 MGP_WSBEiJ_G0014219.1 mouse_genomes_project X 106663524 106670598 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015993.1 MGP_WSBEiJ_G0014123.1 mouse_genomes_project X 89606650 89608244 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094337.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15474856 15545032 + MGP_WSBEiJ_P0094337 Araf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094338.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15532127 15545054 + MGP_WSBEiJ_P0094338 Araf protein_coding protein_coding MGP_WSBEiJ_T0094339.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15532148 15540100 + Araf protein_coding retained_intron MGP_WSBEiJ_T0094340.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15532150 15536488 + MGP_WSBEiJ_P0094340 Araf protein_coding protein_coding MGP_WSBEiJ_T0094341.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15532159 15538144 + Araf protein_coding processed_transcript MGP_WSBEiJ_T0094342.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15532162 15536473 + MGP_WSBEiJ_P0094342 Araf protein_coding protein_coding MGP_WSBEiJ_T0094343.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15532166 15535301 + Araf protein_coding retained_intron MGP_WSBEiJ_T0094344.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15532173 15537034 + MGP_WSBEiJ_P0094344 Araf protein_coding protein_coding MGP_WSBEiJ_T0094345.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15534713 15535798 + Araf protein_coding retained_intron MGP_WSBEiJ_T0094346.1 MGP_WSBEiJ_G0034711.1 mouse_genomes_project X 15542264 15544743 + MGP_WSBEiJ_P0094346 Araf protein_coding protein_coding MGP_WSBEiJ_T0093970.1 MGP_WSBEiJ_G0034606.1 mouse_genomes_project X 60775 63143 - MGP_WSBEiJ_P0093970 Mycs protein_coding protein_coding MGP_WSBEiJ_T0098663.1 MGP_WSBEiJ_G0037326.1 mouse_genomes_project X 37933187 37933377 + Gm24763 snRNA snRNA MGP_WSBEiJ_T0094818.1 MGP_WSBEiJ_G0034887.1 mouse_genomes_project X 65882641 65990300 + MGP_WSBEiJ_P0094818 Mamld1 protein_coding protein_coding MGP_WSBEiJ_T0094819.1 MGP_WSBEiJ_G0034887.1 mouse_genomes_project X 65882641 65991639 + MGP_WSBEiJ_P0094819 Mamld1 protein_coding protein_coding MGP_WSBEiJ_T0016193.1 MGP_WSBEiJ_G0014323.1 mouse_genomes_project X 132024683 132025101 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016278.1 MGP_WSBEiJ_G0014408.1 mouse_genomes_project X 148480342 148480874 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015947.1 MGP_WSBEiJ_G0014077.1 mouse_genomes_project X 83395572 83396043 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005494.1 MGP_WSBEiJ_G0004627.1 mouse_genomes_project X 2778104 2780640 + Rbm3os antisense antisense MGP_WSBEiJ_T0005495.1 MGP_WSBEiJ_G0004627.1 mouse_genomes_project X 2778592 2780352 + Rbm3os antisense antisense MGP_WSBEiJ_T0101137.1 MGP_WSBEiJ_G0039594.1 mouse_genomes_project X 52549230 52549374 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016025.1 MGP_WSBEiJ_G0014155.1 mouse_genomes_project X 96395287 96395499 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096242.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145966409 145979776 - MGP_WSBEiJ_P0096242 protein_coding protein_coding MGP_WSBEiJ_T0096243.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145966409 145979813 - MGP_WSBEiJ_P0096243 protein_coding protein_coding MGP_WSBEiJ_T0096244.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145966409 145979776 - MGP_WSBEiJ_P0096244 protein_coding protein_coding MGP_WSBEiJ_T0096245.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145966527 145977804 - MGP_WSBEiJ_P0096245 protein_coding protein_coding MGP_WSBEiJ_T0096246.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145966806 145979508 - MGP_WSBEiJ_P0096246 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096247.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145971187 145973547 - protein_coding retained_intron MGP_WSBEiJ_T0096248.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145971340 145979776 - MGP_WSBEiJ_P0096248 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096249.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145971464 145973596 - protein_coding retained_intron MGP_WSBEiJ_T0096250.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145973180 145974723 - protein_coding retained_intron MGP_WSBEiJ_T0096251.1 MGP_WSBEiJ_G0035272.1 mouse_genomes_project X 145975261 145979749 - MGP_WSBEiJ_P0096251 protein_coding protein_coding MGP_WSBEiJ_T0096112.1 MGP_WSBEiJ_G0035239.1 mouse_genomes_project X 135846361 135860446 + MGP_WSBEiJ_P0096112 Mid2 protein_coding protein_coding MGP_WSBEiJ_T0096113.1 MGP_WSBEiJ_G0035239.1 mouse_genomes_project X 135846718 135953636 + MGP_WSBEiJ_P0096113 Mid2 protein_coding protein_coding MGP_WSBEiJ_T0096114.1 MGP_WSBEiJ_G0035239.1 mouse_genomes_project X 135846834 135949916 + MGP_WSBEiJ_P0096114 Mid2 protein_coding protein_coding MGP_WSBEiJ_T0096115.1 MGP_WSBEiJ_G0035239.1 mouse_genomes_project X 135859765 135953636 + MGP_WSBEiJ_P0096115 Mid2 protein_coding protein_coding MGP_WSBEiJ_T0096116.1 MGP_WSBEiJ_G0035239.1 mouse_genomes_project X 135934114 135937267 + Mid2 protein_coding retained_intron MGP_WSBEiJ_T0015890.1 MGP_WSBEiJ_G0014020.1 mouse_genomes_project X 69412019 69412604 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099919.1 MGP_WSBEiJ_G0038582.1 mouse_genomes_project X 71794657 71794796 + Gm23280 snoRNA snoRNA MGP_WSBEiJ_T0098685.1 MGP_WSBEiJ_G0037348.1 mouse_genomes_project X 96835336 96835431 - Gm25828 snRNA snRNA MGP_WSBEiJ_T0101168.1 MGP_WSBEiJ_G0039625.1 mouse_genomes_project X 149580567 149586960 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0095264.1 MGP_WSBEiJ_G0034974.1 mouse_genomes_project X 72633725 72672101 - MGP_WSBEiJ_P0095264 Prkx protein_coding protein_coding MGP_WSBEiJ_T0095265.1 MGP_WSBEiJ_G0034974.1 mouse_genomes_project X 72643991 72671801 - MGP_WSBEiJ_P0095265 Prkx protein_coding protein_coding MGP_WSBEiJ_T0016096.1 MGP_WSBEiJ_G0014226.1 mouse_genomes_project X 107563409 107578133 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010996.1 MGP_WSBEiJ_G0009153.1 mouse_genomes_project X 73731374 73731466 - Gm23556 miRNA miRNA MGP_WSBEiJ_T0094725.1 MGP_WSBEiJ_G0034852.1 mouse_genomes_project X 51932136 51935760 + MGP_WSBEiJ_P0094725 Htatsf1 protein_coding protein_coding MGP_WSBEiJ_T0094726.1 MGP_WSBEiJ_G0034852.1 mouse_genomes_project X 51932168 51945746 + MGP_WSBEiJ_P0094726 Htatsf1 protein_coding protein_coding MGP_WSBEiJ_T0094727.1 MGP_WSBEiJ_G0034852.1 mouse_genomes_project X 51932451 51935758 + Htatsf1 protein_coding retained_intron MGP_WSBEiJ_T0094889.1 MGP_WSBEiJ_G0034909.1 mouse_genomes_project X 68145581 68152512 + MGP_WSBEiJ_P0094889 protein_coding protein_coding MGP_WSBEiJ_T0096613.1 MGP_WSBEiJ_G0035358.1 mouse_genomes_project X 161839779 161887293 - MGP_WSBEiJ_P0096613 Ofd1 protein_coding protein_coding MGP_WSBEiJ_T0094866.1 MGP_WSBEiJ_G0034898.1 mouse_genomes_project X 67072661 67073609 + MGP_WSBEiJ_P0094866 Magea4 protein_coding protein_coding MGP_WSBEiJ_T0016223.1 MGP_WSBEiJ_G0014353.1 mouse_genomes_project X 137085767 137086040 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098660.1 MGP_WSBEiJ_G0037323.1 mouse_genomes_project X 31093031 31093129 - Gm22364 snRNA snRNA MGP_WSBEiJ_T0016314.1 MGP_WSBEiJ_G0014444.1 mouse_genomes_project X 155447226 155447660 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095516.1 MGP_WSBEiJ_G0035052.1 mouse_genomes_project X 95656238 95712529 + MGP_WSBEiJ_P0095516 Dlg3 protein_coding protein_coding MGP_WSBEiJ_T0095517.1 MGP_WSBEiJ_G0035052.1 mouse_genomes_project X 95656239 95712531 + MGP_WSBEiJ_P0095517 Dlg3 protein_coding protein_coding MGP_WSBEiJ_T0095518.1 MGP_WSBEiJ_G0035052.1 mouse_genomes_project X 95656265 95712531 + MGP_WSBEiJ_P0095518 Dlg3 protein_coding protein_coding MGP_WSBEiJ_T0095519.1 MGP_WSBEiJ_G0035052.1 mouse_genomes_project X 95656511 95712533 + Dlg3 protein_coding retained_intron MGP_WSBEiJ_T0095520.1 MGP_WSBEiJ_G0035052.1 mouse_genomes_project X 95663301 95712531 + MGP_WSBEiJ_P0095520 Dlg3 protein_coding protein_coding MGP_WSBEiJ_T0095521.1 MGP_WSBEiJ_G0035052.1 mouse_genomes_project X 95666590 95712531 + Dlg3 protein_coding processed_transcript MGP_WSBEiJ_T0095522.1 MGP_WSBEiJ_G0035052.1 mouse_genomes_project X 95689201 95700127 + Dlg3 protein_coding processed_transcript MGP_WSBEiJ_T0095523.1 MGP_WSBEiJ_G0035052.1 mouse_genomes_project X 95701513 95708344 + Dlg3 protein_coding processed_transcript MGP_WSBEiJ_T0100187.1 MGP_WSBEiJ_G0038755.1 mouse_genomes_project X 145509631 145510601 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0098662.1 MGP_WSBEiJ_G0037325.1 mouse_genomes_project X 33990936 33991041 - Gm26437 snRNA snRNA MGP_WSBEiJ_T0096223.1 MGP_WSBEiJ_G0035270.1 mouse_genomes_project X 145871677 145894941 + MGP_WSBEiJ_P0096223 Alas2 protein_coding protein_coding MGP_WSBEiJ_T0096224.1 MGP_WSBEiJ_G0035270.1 mouse_genomes_project X 145871761 145894925 + MGP_WSBEiJ_P0096224 Alas2 protein_coding protein_coding MGP_WSBEiJ_T0096225.1 MGP_WSBEiJ_G0035270.1 mouse_genomes_project X 145878359 145881986 + Alas2 protein_coding retained_intron MGP_WSBEiJ_T0096226.1 MGP_WSBEiJ_G0035270.1 mouse_genomes_project X 145890695 145894925 + Alas2 protein_coding processed_transcript MGP_WSBEiJ_T0094222.1 MGP_WSBEiJ_G0034679.1 mouse_genomes_project X 5229947 5340898 + Tspan7 protein_coding retained_intron MGP_WSBEiJ_T0094223.1 MGP_WSBEiJ_G0034679.1 mouse_genomes_project X 5229947 5340898 + MGP_WSBEiJ_P0094223 Tspan7 protein_coding protein_coding MGP_WSBEiJ_T0094224.1 MGP_WSBEiJ_G0034679.1 mouse_genomes_project X 5229947 5340898 + MGP_WSBEiJ_P0094224 Tspan7 protein_coding protein_coding MGP_WSBEiJ_T0016072.1 MGP_WSBEiJ_G0014202.1 mouse_genomes_project X 101909524 101909742 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095496.1 MGP_WSBEiJ_G0035048.1 mouse_genomes_project X 95498589 95511585 + MGP_WSBEiJ_P0095496 Arr3 protein_coding protein_coding MGP_WSBEiJ_T0095497.1 MGP_WSBEiJ_G0035048.1 mouse_genomes_project X 95498615 95506716 + Arr3 protein_coding retained_intron MGP_WSBEiJ_T0095498.1 MGP_WSBEiJ_G0035048.1 mouse_genomes_project X 95498636 95506155 + Arr3 protein_coding retained_intron MGP_WSBEiJ_T0095499.1 MGP_WSBEiJ_G0035048.1 mouse_genomes_project X 95498647 95506924 + Arr3 protein_coding retained_intron MGP_WSBEiJ_T0095500.1 MGP_WSBEiJ_G0035048.1 mouse_genomes_project X 95498654 95511585 + Arr3 protein_coding retained_intron MGP_WSBEiJ_T0095501.1 MGP_WSBEiJ_G0035048.1 mouse_genomes_project X 95498739 95505025 + MGP_WSBEiJ_P0095501 Arr3 protein_coding protein_coding MGP_WSBEiJ_T0095502.1 MGP_WSBEiJ_G0035048.1 mouse_genomes_project X 95499714 95511479 + MGP_WSBEiJ_P0095502 Arr3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0095503.1 MGP_WSBEiJ_G0035048.1 mouse_genomes_project X 95504919 95507523 + Arr3 protein_coding retained_intron MGP_WSBEiJ_T0005538.1 MGP_WSBEiJ_G0004661.1 mouse_genomes_project X 157391217 157391772 + Gm15202 antisense antisense MGP_WSBEiJ_T0094110.1 MGP_WSBEiJ_G0034638.1 mouse_genomes_project X 2528292 2528678 + MGP_WSBEiJ_P0094110 protein_coding protein_coding MGP_WSBEiJ_T0011021.1 MGP_WSBEiJ_G0009178.1 mouse_genomes_project X 137945822 137945920 + Mir652 miRNA miRNA MGP_WSBEiJ_T0015752.1 MGP_WSBEiJ_G0013882.1 mouse_genomes_project X 36018988 36019244 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015709.1 MGP_WSBEiJ_G0013839.1 mouse_genomes_project X 14571496 14571959 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015731.1 MGP_WSBEiJ_G0013861.1 mouse_genomes_project X 31058000 31058294 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099951.1 MGP_WSBEiJ_G0038614.1 mouse_genomes_project X 153812861 153813012 + Gm22522 snoRNA snoRNA MGP_WSBEiJ_T0015759.1 MGP_WSBEiJ_G0013889.1 mouse_genomes_project X 37572873 37573264 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015796.1 MGP_WSBEiJ_G0013926.1 mouse_genomes_project X 47543300 47543791 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099954.1 MGP_WSBEiJ_G0038617.1 mouse_genomes_project X 159823562 159823692 + Gm22023 snoRNA snoRNA MGP_WSBEiJ_T0016126.1 MGP_WSBEiJ_G0014256.1 mouse_genomes_project X 112915258 112917363 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098657.1 MGP_WSBEiJ_G0037320.1 mouse_genomes_project X 17129687 17129790 + Gm25812 snRNA snRNA MGP_WSBEiJ_T0016245.1 MGP_WSBEiJ_G0014375.1 mouse_genomes_project X 139524387 139524717 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098703.1 MGP_WSBEiJ_G0037366.1 mouse_genomes_project X 129474869 129474976 + Gm23124 snRNA snRNA MGP_WSBEiJ_T0015799.1 MGP_WSBEiJ_G0013929.1 mouse_genomes_project X 48327431 48327991 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016159.1 MGP_WSBEiJ_G0014289.1 mouse_genomes_project X 124578100 124578423 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015704.1 MGP_WSBEiJ_G0013834.1 mouse_genomes_project X 13656735 13657352 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094661.1 MGP_WSBEiJ_G0034824.1 mouse_genomes_project X 46923436 47266189 - MGP_WSBEiJ_P0094661 Gpc3 protein_coding protein_coding MGP_WSBEiJ_T0094662.1 MGP_WSBEiJ_G0034824.1 mouse_genomes_project X 47036697 47266218 - MGP_WSBEiJ_P0094662 Gpc3 protein_coding protein_coding MGP_WSBEiJ_T0095672.1 MGP_WSBEiJ_G0035095.1 mouse_genomes_project X 99645644 99777778 - MGP_WSBEiJ_P0095672 Zdhhc15 protein_coding protein_coding MGP_WSBEiJ_T0094466.1 MGP_WSBEiJ_G0034769.1 mouse_genomes_project X 32753003 32761574 - MGP_WSBEiJ_P0094466 Rhox11 protein_coding protein_coding MGP_WSBEiJ_T0095904.1 MGP_WSBEiJ_G0035169.1 mouse_genomes_project X 129438112 129454487 - MGP_WSBEiJ_P0095904 Taf7l protein_coding protein_coding MGP_WSBEiJ_T0095905.1 MGP_WSBEiJ_G0035169.1 mouse_genomes_project X 129438556 129453002 - MGP_WSBEiJ_P0095905 Taf7l protein_coding protein_coding MGP_WSBEiJ_T0095906.1 MGP_WSBEiJ_G0035169.1 mouse_genomes_project X 129447883 129452997 - Taf7l protein_coding processed_transcript MGP_WSBEiJ_T0095347.1 MGP_WSBEiJ_G0035008.1 mouse_genomes_project X 88180002 88515554 - MGP_WSBEiJ_P0095347 Pola1 protein_coding protein_coding MGP_WSBEiJ_T0095348.1 MGP_WSBEiJ_G0035008.1 mouse_genomes_project X 88357709 88368203 - Pola1 protein_coding processed_transcript MGP_WSBEiJ_T0095349.1 MGP_WSBEiJ_G0035008.1 mouse_genomes_project X 88502720 88515542 - Pola1 protein_coding retained_intron MGP_WSBEiJ_T0095350.1 MGP_WSBEiJ_G0035008.1 mouse_genomes_project X 88502720 88515514 - Pola1 protein_coding processed_transcript MGP_WSBEiJ_T0018035.1 MGP_WSBEiJ_G0015201.1 mouse_genomes_project X 95631125 95635365 - Gm14866 processed_transcript processed_transcript MGP_WSBEiJ_T0094701.1 MGP_WSBEiJ_G0034846.1 mouse_genomes_project X 51448203 51460766 - MGP_WSBEiJ_P0094701 Mmgt1 protein_coding protein_coding MGP_WSBEiJ_T0015858.1 MGP_WSBEiJ_G0013988.1 mouse_genomes_project X 61649341 61649755 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095830.1 MGP_WSBEiJ_G0035145.1 mouse_genomes_project X 113480237 113481267 + MGP_WSBEiJ_P0095830 Tgif2lx2 protein_coding protein_coding MGP_WSBEiJ_T0015944.1 MGP_WSBEiJ_G0014074.1 mouse_genomes_project X 82822322 82822858 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094781.1 MGP_WSBEiJ_G0034873.1 mouse_genomes_project X 59169104 59181396 - MGP_WSBEiJ_P0094781 Slitrk4 protein_coding protein_coding MGP_WSBEiJ_T0094782.1 MGP_WSBEiJ_G0034873.1 mouse_genomes_project X 59174176 59181379 - MGP_WSBEiJ_P0094782 Slitrk4 protein_coding protein_coding MGP_WSBEiJ_T0094783.1 MGP_WSBEiJ_G0034873.1 mouse_genomes_project X 59177126 59180222 - MGP_WSBEiJ_P0094783 Slitrk4 protein_coding protein_coding MGP_WSBEiJ_T0016004.1 MGP_WSBEiJ_G0014134.1 mouse_genomes_project X 91467484 91469192 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094443.1 MGP_WSBEiJ_G0034748.1 mouse_genomes_project X 31900746 31906472 - MGP_WSBEiJ_P0094443 Ndufa1 protein_coding protein_coding MGP_WSBEiJ_T0098722.1 MGP_WSBEiJ_G0037385.1 mouse_genomes_project X 161237749 161237856 - Gm22062 snRNA snRNA MGP_WSBEiJ_T0011568.1 MGP_WSBEiJ_G0009725.1 mouse_genomes_project X 98668654 98668747 + Gm27987 misc_RNA misc_RNA MGP_WSBEiJ_T0095743.1 MGP_WSBEiJ_G0035114.1 mouse_genomes_project X 102409197 102452919 + MGP_WSBEiJ_P0095743 Gpr174 protein_coding protein_coding MGP_WSBEiJ_T0095744.1 MGP_WSBEiJ_G0035114.1 mouse_genomes_project X 102409228 102453514 + MGP_WSBEiJ_P0095744 Gpr174 protein_coding protein_coding MGP_WSBEiJ_T0095745.1 MGP_WSBEiJ_G0035114.1 mouse_genomes_project X 102409285 102452054 + MGP_WSBEiJ_P0095745 Gpr174 protein_coding protein_coding MGP_WSBEiJ_T0095746.1 MGP_WSBEiJ_G0035114.1 mouse_genomes_project X 102409617 102452066 + MGP_WSBEiJ_P0095746 Gpr174 protein_coding protein_coding MGP_WSBEiJ_T0095747.1 MGP_WSBEiJ_G0035114.1 mouse_genomes_project X 102423259 102449069 + Gpr174 protein_coding processed_transcript MGP_WSBEiJ_T0095748.1 MGP_WSBEiJ_G0035114.1 mouse_genomes_project X 102441021 102449200 + Gpr174 protein_coding processed_transcript MGP_WSBEiJ_T0095749.1 MGP_WSBEiJ_G0035114.1 mouse_genomes_project X 102441021 102453516 + MGP_WSBEiJ_P0095749 Gpr174 protein_coding protein_coding MGP_WSBEiJ_T0015693.1 MGP_WSBEiJ_G0013823.1 mouse_genomes_project X 9738760 9739637 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015649.1 MGP_WSBEiJ_G0013779.1 mouse_genomes_project X 484756 486574 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015678.1 MGP_WSBEiJ_G0013808.1 mouse_genomes_project X 6632558 6632999 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005511.1 MGP_WSBEiJ_G0004641.1 mouse_genomes_project X 66281988 66311625 + Gm16189 antisense antisense MGP_WSBEiJ_T0011577.1 MGP_WSBEiJ_G0009734.1 mouse_genomes_project X 132932778 132933063 - Gm25393 misc_RNA misc_RNA MGP_WSBEiJ_T0015859.1 MGP_WSBEiJ_G0013989.1 mouse_genomes_project X 61820214 61821651 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094583.1 MGP_WSBEiJ_G0034798.1 mouse_genomes_project X 42945007 42975070 + MGP_WSBEiJ_P0094583 Utp14a protein_coding protein_coding MGP_WSBEiJ_T0094584.1 MGP_WSBEiJ_G0034798.1 mouse_genomes_project X 42945042 42956257 + Utp14a protein_coding processed_transcript MGP_WSBEiJ_T0094585.1 MGP_WSBEiJ_G0034798.1 mouse_genomes_project X 42945063 42961348 + Utp14a protein_coding processed_transcript MGP_WSBEiJ_T0094586.1 MGP_WSBEiJ_G0034798.1 mouse_genomes_project X 42945088 42975057 + MGP_WSBEiJ_P0094586 Utp14a protein_coding unknown_likely_coding MGP_WSBEiJ_T0016033.1 MGP_WSBEiJ_G0014163.1 mouse_genomes_project X 97601537 97602942 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015713.1 MGP_WSBEiJ_G0013843.1 mouse_genomes_project X 15134607 15134803 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016040.1 MGP_WSBEiJ_G0014170.1 mouse_genomes_project X 98070232 98070745 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098648.1 MGP_WSBEiJ_G0037311.1 mouse_genomes_project X 6615786 6615893 + Gm26314 snRNA snRNA MGP_WSBEiJ_T0005526.1 MGP_WSBEiJ_G0004654.1 mouse_genomes_project X 136943178 136944504 + Gm15295 antisense antisense MGP_WSBEiJ_T0094111.1 MGP_WSBEiJ_G0034639.1 mouse_genomes_project X 2540368 2544955 + MGP_WSBEiJ_P0094111 Pcsk1n protein_coding protein_coding MGP_WSBEiJ_T0016249.1 MGP_WSBEiJ_G0014379.1 mouse_genomes_project X 140428786 140429420 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016103.1 MGP_WSBEiJ_G0014233.1 mouse_genomes_project X 108057105 108058050 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095758.1 MGP_WSBEiJ_G0035118.1 mouse_genomes_project X 102959065 103047739 + MGP_WSBEiJ_P0095758 Fam46d protein_coding protein_coding MGP_WSBEiJ_T0095759.1 MGP_WSBEiJ_G0035118.1 mouse_genomes_project X 102982920 103045389 + MGP_WSBEiJ_P0095759 Fam46d protein_coding protein_coding MGP_WSBEiJ_T0095760.1 MGP_WSBEiJ_G0035118.1 mouse_genomes_project X 102983015 103047739 + MGP_WSBEiJ_P0095760 Fam46d protein_coding protein_coding MGP_WSBEiJ_T0095761.1 MGP_WSBEiJ_G0035118.1 mouse_genomes_project X 102983015 103045230 + MGP_WSBEiJ_P0095761 Fam46d protein_coding protein_coding MGP_WSBEiJ_T0094593.1 MGP_WSBEiJ_G0034801.1 mouse_genomes_project X 43177756 43216680 - Aifm1 protein_coding retained_intron MGP_WSBEiJ_T0094594.1 MGP_WSBEiJ_G0034801.1 mouse_genomes_project X 43177756 43216813 - MGP_WSBEiJ_P0094594 Aifm1 protein_coding protein_coding MGP_WSBEiJ_T0094595.1 MGP_WSBEiJ_G0034801.1 mouse_genomes_project X 43177756 43216817 - MGP_WSBEiJ_P0094595 Aifm1 protein_coding protein_coding MGP_WSBEiJ_T0094596.1 MGP_WSBEiJ_G0034801.1 mouse_genomes_project X 43177757 43185709 - Aifm1 protein_coding processed_transcript MGP_WSBEiJ_T0094597.1 MGP_WSBEiJ_G0034801.1 mouse_genomes_project X 43188270 43189331 - Aifm1 protein_coding processed_transcript MGP_WSBEiJ_T0093975.1 MGP_WSBEiJ_G0034610.1 mouse_genomes_project X 1024762 1259133 + MGP_WSBEiJ_P0093975 Shroom4 protein_coding protein_coding MGP_WSBEiJ_T0093976.1 MGP_WSBEiJ_G0034610.1 mouse_genomes_project X 1042036 1208863 + MGP_WSBEiJ_P0093976 Shroom4 protein_coding protein_coding MGP_WSBEiJ_T0093977.1 MGP_WSBEiJ_G0034610.1 mouse_genomes_project X 1202608 1262740 + MGP_WSBEiJ_P0093977 Shroom4 protein_coding protein_coding MGP_WSBEiJ_T0015811.1 MGP_WSBEiJ_G0013941.1 mouse_genomes_project X 52514102 52514348 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0018082.1 MGP_WSBEiJ_G0015215.1 mouse_genomes_project X 164804581 164847565 + Gm15246 processed_transcript processed_transcript MGP_WSBEiJ_T0018083.1 MGP_WSBEiJ_G0015215.1 mouse_genomes_project X 164804581 164854575 + Gm15246 processed_transcript processed_transcript MGP_WSBEiJ_T0096004.1 MGP_WSBEiJ_G0035205.1 mouse_genomes_project X 131831478 131840938 - MGP_WSBEiJ_P0096004 Morf4l2 protein_coding protein_coding MGP_WSBEiJ_T0096005.1 MGP_WSBEiJ_G0035205.1 mouse_genomes_project X 131832962 131842170 - MGP_WSBEiJ_P0096005 Morf4l2 protein_coding protein_coding MGP_WSBEiJ_T0096006.1 MGP_WSBEiJ_G0035205.1 mouse_genomes_project X 131832988 131839764 - MGP_WSBEiJ_P0096006 Morf4l2 protein_coding protein_coding MGP_WSBEiJ_T0096007.1 MGP_WSBEiJ_G0035205.1 mouse_genomes_project X 131832990 131842199 - MGP_WSBEiJ_P0096007 Morf4l2 protein_coding protein_coding MGP_WSBEiJ_T0096008.1 MGP_WSBEiJ_G0035205.1 mouse_genomes_project X 131833118 131839760 - MGP_WSBEiJ_P0096008 Morf4l2 protein_coding protein_coding MGP_WSBEiJ_T0096009.1 MGP_WSBEiJ_G0035205.1 mouse_genomes_project X 131834286 131840553 - Morf4l2 protein_coding processed_transcript MGP_WSBEiJ_T0015949.1 MGP_WSBEiJ_G0014079.1 mouse_genomes_project X 83515315 83517760 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094029.1 MGP_WSBEiJ_G0034624.1 mouse_genomes_project X 2276129 2284177 - Magix protein_coding processed_transcript MGP_WSBEiJ_T0094030.1 MGP_WSBEiJ_G0034624.1 mouse_genomes_project X 2277591 2284015 - MGP_WSBEiJ_P0094030 Magix protein_coding protein_coding MGP_WSBEiJ_T0015980.1 MGP_WSBEiJ_G0014110.1 mouse_genomes_project X 88826576 88826847 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094773.1 MGP_WSBEiJ_G0034867.1 mouse_genomes_project X 56080898 56083483 - MGP_WSBEiJ_P0094773 Cdr1 protein_coding protein_coding MGP_WSBEiJ_T0018069.1 MGP_WSBEiJ_G0015210.1 mouse_genomes_project X 131841100 131857361 + BC065397 processed_transcript processed_transcript MGP_WSBEiJ_T0018070.1 MGP_WSBEiJ_G0015210.1 mouse_genomes_project X 131841122 131859060 + BC065397 processed_transcript processed_transcript MGP_WSBEiJ_T0018071.1 MGP_WSBEiJ_G0015210.1 mouse_genomes_project X 131841134 131843870 + BC065397 processed_transcript processed_transcript MGP_WSBEiJ_T0018072.1 MGP_WSBEiJ_G0015210.1 mouse_genomes_project X 131841164 131857339 + BC065397 processed_transcript processed_transcript MGP_WSBEiJ_T0018073.1 MGP_WSBEiJ_G0015210.1 mouse_genomes_project X 131842256 131902425 + BC065397 processed_transcript processed_transcript MGP_WSBEiJ_T0018074.1 MGP_WSBEiJ_G0015210.1 mouse_genomes_project X 131842682 131857376 + BC065397 processed_transcript processed_transcript MGP_WSBEiJ_T0018075.1 MGP_WSBEiJ_G0015210.1 mouse_genomes_project X 131864786 131902434 + BC065397 processed_transcript processed_transcript MGP_WSBEiJ_T0095765.1 MGP_WSBEiJ_G0035121.1 mouse_genomes_project X 103880915 103979533 - MGP_WSBEiJ_P0095765 Brwd3 protein_coding protein_coding MGP_WSBEiJ_T0095766.1 MGP_WSBEiJ_G0035121.1 mouse_genomes_project X 103886465 103979533 - MGP_WSBEiJ_P0095766 Brwd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095767.1 MGP_WSBEiJ_G0035121.1 mouse_genomes_project X 103886465 103979533 - MGP_WSBEiJ_P0095767 Brwd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095768.1 MGP_WSBEiJ_G0035121.1 mouse_genomes_project X 103947333 103979533 - Brwd3 protein_coding retained_intron MGP_WSBEiJ_T0095769.1 MGP_WSBEiJ_G0035121.1 mouse_genomes_project X 103965789 103979533 - MGP_WSBEiJ_P0095769 Brwd3 protein_coding protein_coding MGP_WSBEiJ_T0095211.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70034630 70057673 - MGP_WSBEiJ_P0095211 Mpp1 protein_coding protein_coding MGP_WSBEiJ_T0095212.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70035543 70057501 - MGP_WSBEiJ_P0095212 Mpp1 protein_coding protein_coding MGP_WSBEiJ_T0095213.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70036611 70057606 - MGP_WSBEiJ_P0095213 Mpp1 protein_coding protein_coding MGP_WSBEiJ_T0095214.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70037248 70057511 - MGP_WSBEiJ_P0095214 Mpp1 protein_coding protein_coding MGP_WSBEiJ_T0095215.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70038384 70057511 - Mpp1 protein_coding processed_transcript MGP_WSBEiJ_T0095216.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70040653 70042665 - Mpp1 protein_coding retained_intron MGP_WSBEiJ_T0095217.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70040879 70057511 - MGP_WSBEiJ_P0095217 Mpp1 protein_coding protein_coding MGP_WSBEiJ_T0095218.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70046435 70057511 - MGP_WSBEiJ_P0095218 Mpp1 protein_coding protein_coding MGP_WSBEiJ_T0095219.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70049648 70057643 - Mpp1 protein_coding retained_intron MGP_WSBEiJ_T0095220.1 MGP_WSBEiJ_G0034958.1 mouse_genomes_project X 70052476 70057610 - MGP_WSBEiJ_P0095220 Mpp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099906.1 MGP_WSBEiJ_G0038569.1 mouse_genomes_project X 37363131 37363261 - Gm23705 snoRNA snoRNA MGP_WSBEiJ_T0094003.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2205176 2233791 + MGP_WSBEiJ_P0094003 Cacna1f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094004.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2205191 2216730 + Cacna1f protein_coding retained_intron MGP_WSBEiJ_T0094005.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2205192 2233794 + MGP_WSBEiJ_P0094005 Cacna1f protein_coding protein_coding MGP_WSBEiJ_T0094006.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2205213 2217754 + MGP_WSBEiJ_P0094006 Cacna1f protein_coding protein_coding MGP_WSBEiJ_T0094007.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2205222 2233794 + MGP_WSBEiJ_P0094007 Cacna1f protein_coding protein_coding MGP_WSBEiJ_T0094008.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2205237 2233792 + Cacna1f protein_coding retained_intron MGP_WSBEiJ_T0094009.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2224835 2226546 + Cacna1f protein_coding retained_intron MGP_WSBEiJ_T0094010.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2225797 2228849 + MGP_WSBEiJ_P0094010 Cacna1f protein_coding protein_coding MGP_WSBEiJ_T0094011.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2225797 2229102 + MGP_WSBEiJ_P0094011 Cacna1f protein_coding protein_coding MGP_WSBEiJ_T0094012.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2226793 2228365 + Cacna1f protein_coding retained_intron MGP_WSBEiJ_T0094013.1 MGP_WSBEiJ_G0034619.1 mouse_genomes_project X 2229878 2231587 + Cacna1f protein_coding retained_intron MGP_WSBEiJ_T0095713.1 MGP_WSBEiJ_G0035103.1 mouse_genomes_project X 101148242 101250087 + MGP_WSBEiJ_P0095713 Atp7a protein_coding protein_coding MGP_WSBEiJ_T0095714.1 MGP_WSBEiJ_G0035103.1 mouse_genomes_project X 101148288 101250096 + MGP_WSBEiJ_P0095714 Atp7a protein_coding protein_coding MGP_WSBEiJ_T0095715.1 MGP_WSBEiJ_G0035103.1 mouse_genomes_project X 101231499 101242936 + Atp7a protein_coding processed_transcript MGP_WSBEiJ_T0095716.1 MGP_WSBEiJ_G0035103.1 mouse_genomes_project X 101239863 101247615 + Atp7a protein_coding retained_intron MGP_WSBEiJ_T0094033.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330485 2334852 + MGP_WSBEiJ_P0094033 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094034.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330732 2336760 + MGP_WSBEiJ_P0094034 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094035.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330752 2336550 + MGP_WSBEiJ_P0094035 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094036.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330761 2336761 + MGP_WSBEiJ_P0094036 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094037.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330762 2334852 + MGP_WSBEiJ_P0094037 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094038.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330762 2336742 + MGP_WSBEiJ_P0094038 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094039.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330772 2336510 + MGP_WSBEiJ_P0094039 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094040.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330867 2332814 + MGP_WSBEiJ_P0094040 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094041.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330869 2334836 + MGP_WSBEiJ_P0094041 Wdr45 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094042.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2330874 2334851 + MGP_WSBEiJ_P0094042 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094043.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2331245 2334892 + Wdr45 protein_coding processed_transcript MGP_WSBEiJ_T0094044.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2331439 2336563 + MGP_WSBEiJ_P0094044 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094045.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2331853 2334587 + MGP_WSBEiJ_P0094045 Wdr45 protein_coding protein_coding MGP_WSBEiJ_T0094046.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2332067 2334440 + Wdr45 protein_coding processed_transcript MGP_WSBEiJ_T0094047.1 MGP_WSBEiJ_G0034626.1 mouse_genomes_project X 2335132 2336050 + Wdr45 protein_coding processed_transcript MGP_WSBEiJ_T0011573.1 MGP_WSBEiJ_G0009730.1 mouse_genomes_project X 124302002 124302280 - Gm22225 misc_RNA misc_RNA MGP_WSBEiJ_T0095448.1 MGP_WSBEiJ_G0035034.1 mouse_genomes_project X 92998625 93174570 + MGP_WSBEiJ_P0095448 Ar protein_coding protein_coding MGP_WSBEiJ_T0016010.1 MGP_WSBEiJ_G0014140.1 mouse_genomes_project X 92708911 92709637 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094178.1 MGP_WSBEiJ_G0034655.1 mouse_genomes_project X 3026289 3446586 + MGP_WSBEiJ_P0094178 protein_coding protein_coding MGP_WSBEiJ_T0016310.1 MGP_WSBEiJ_G0014440.1 mouse_genomes_project X 154513038 154515619 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094276.1 MGP_WSBEiJ_G0034692.1 mouse_genomes_project X 11351822 11361954 + MGP_WSBEiJ_P0094276 protein_coding protein_coding MGP_WSBEiJ_T0018076.1 MGP_WSBEiJ_G0015211.1 mouse_genomes_project X 134356172 134482844 - Platr21 processed_transcript processed_transcript MGP_WSBEiJ_T0018077.1 MGP_WSBEiJ_G0015211.1 mouse_genomes_project X 134473573 134483815 - Platr21 processed_transcript processed_transcript MGP_WSBEiJ_T0094192.1 MGP_WSBEiJ_G0034667.1 mouse_genomes_project X 3742682 3743140 + MGP_WSBEiJ_P0094192 protein_coding protein_coding MGP_WSBEiJ_T0096417.1 MGP_WSBEiJ_G0035312.1 mouse_genomes_project X 153141813 153194907 + MGP_WSBEiJ_P0096417 Smpx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096418.1 MGP_WSBEiJ_G0035312.1 mouse_genomes_project X 153141813 153145916 + MGP_WSBEiJ_P0096418 Smpx protein_coding protein_coding MGP_WSBEiJ_T0096419.1 MGP_WSBEiJ_G0035312.1 mouse_genomes_project X 153141876 153194905 + MGP_WSBEiJ_P0096419 Smpx protein_coding protein_coding MGP_WSBEiJ_T0096420.1 MGP_WSBEiJ_G0035312.1 mouse_genomes_project X 153142030 153194905 + MGP_WSBEiJ_P0096420 Smpx protein_coding protein_coding MGP_WSBEiJ_T0096421.1 MGP_WSBEiJ_G0035312.1 mouse_genomes_project X 153142163 153194530 + MGP_WSBEiJ_P0096421 Smpx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096422.1 MGP_WSBEiJ_G0035312.1 mouse_genomes_project X 153145501 153194557 + MGP_WSBEiJ_P0096422 Smpx protein_coding protein_coding MGP_WSBEiJ_T0096423.1 MGP_WSBEiJ_G0035312.1 mouse_genomes_project X 153157191 153194527 + Smpx protein_coding retained_intron MGP_WSBEiJ_T0096424.1 MGP_WSBEiJ_G0035312.1 mouse_genomes_project X 153164179 153194599 + Smpx protein_coding retained_intron MGP_WSBEiJ_T0015757.1 MGP_WSBEiJ_G0013887.1 mouse_genomes_project X 36792684 36798805 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096020.1 MGP_WSBEiJ_G0035212.1 mouse_genomes_project X 132074795 132081101 - MGP_WSBEiJ_P0096020 protein_coding protein_coding MGP_WSBEiJ_T0095488.1 MGP_WSBEiJ_G0035042.1 mouse_genomes_project X 95287366 95297379 - MGP_WSBEiJ_P0095488 Awat2 protein_coding protein_coding MGP_WSBEiJ_T0016210.1 MGP_WSBEiJ_G0014340.1 mouse_genomes_project X 134946630 134946736 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009237.1 MGP_WSBEiJ_G0007425.1 mouse_genomes_project X 67820735 67821257 + Gm14684 lincRNA lincRNA MGP_WSBEiJ_T0009226.1 MGP_WSBEiJ_G0007418.1 mouse_genomes_project X 43999514 44032694 - Gm14696 lincRNA lincRNA MGP_WSBEiJ_T0016199.1 MGP_WSBEiJ_G0014329.1 mouse_genomes_project X 132264811 132266492 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099932.1 MGP_WSBEiJ_G0038595.1 mouse_genomes_project X 116044460 116044588 + Gm22590 snoRNA snoRNA MGP_WSBEiJ_T0015927.1 MGP_WSBEiJ_G0014057.1 mouse_genomes_project X 77328498 77329300 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015706.1 MGP_WSBEiJ_G0013836.1 mouse_genomes_project X 14413778 14414175 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015913.1 MGP_WSBEiJ_G0014043.1 mouse_genomes_project X 73522274 73523229 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011031.1 MGP_WSBEiJ_G0009188.1 mouse_genomes_project X 142350062 142350174 + Mir448 miRNA miRNA MGP_WSBEiJ_T0015776.1 MGP_WSBEiJ_G0013906.1 mouse_genomes_project X 42155148 42156153 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015673.1 MGP_WSBEiJ_G0013803.1 mouse_genomes_project X 5447025 5447458 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010984.1 MGP_WSBEiJ_G0009141.1 mouse_genomes_project X 62796650 62796728 - Mir547 miRNA miRNA MGP_WSBEiJ_T0015809.1 MGP_WSBEiJ_G0013939.1 mouse_genomes_project X 51017114 51017681 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096104.1 MGP_WSBEiJ_G0035237.1 mouse_genomes_project X 135636321 135645075 + Prps1 protein_coding processed_transcript MGP_WSBEiJ_T0096105.1 MGP_WSBEiJ_G0035237.1 mouse_genomes_project X 135636321 135655753 + MGP_WSBEiJ_P0096105 Prps1 protein_coding protein_coding MGP_WSBEiJ_T0097139.1 MGP_WSBEiJ_G0035820.1 mouse_genomes_project X 13077311 13077430 - n-R5s5 rRNA rRNA MGP_WSBEiJ_T0094448.1 MGP_WSBEiJ_G0034753.1 mouse_genomes_project X 31992457 31993785 + MGP_WSBEiJ_P0094448 protein_coding protein_coding MGP_WSBEiJ_T0094126.1 MGP_WSBEiJ_G0034643.1 mouse_genomes_project X 2629915 2645024 - MGP_WSBEiJ_P0094126 Glod5 protein_coding protein_coding MGP_WSBEiJ_T0098707.1 MGP_WSBEiJ_G0037370.1 mouse_genomes_project X 140363987 140364132 + Gm25097 snRNA snRNA MGP_WSBEiJ_T0011007.1 MGP_WSBEiJ_G0009164.1 mouse_genomes_project X 98633876 98633925 + Mir374c miRNA miRNA MGP_WSBEiJ_T0015923.1 MGP_WSBEiJ_G0014053.1 mouse_genomes_project X 75962906 75963635 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015941.1 MGP_WSBEiJ_G0014071.1 mouse_genomes_project X 81538590 81538900 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015902.1 MGP_WSBEiJ_G0014032.1 mouse_genomes_project X 71711886 71712900 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094870.1 MGP_WSBEiJ_G0034900.1 mouse_genomes_project X 67244247 67249236 - MGP_WSBEiJ_P0094870 Magea10 protein_coding protein_coding MGP_WSBEiJ_T0099914.1 MGP_WSBEiJ_G0038577.1 mouse_genomes_project X 68680115 68680180 + Gm23615 snoRNA snoRNA MGP_WSBEiJ_T0016186.1 MGP_WSBEiJ_G0014316.1 mouse_genomes_project X 130644295 130645035 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094563.1 MGP_WSBEiJ_G0034793.1 mouse_genomes_project X 42580814 42635220 + MGP_WSBEiJ_P0094563 Ocrl protein_coding protein_coding MGP_WSBEiJ_T0094564.1 MGP_WSBEiJ_G0034793.1 mouse_genomes_project X 42580865 42626430 + MGP_WSBEiJ_P0094564 Ocrl protein_coding protein_coding MGP_WSBEiJ_T0094565.1 MGP_WSBEiJ_G0034793.1 mouse_genomes_project X 42580880 42626413 + Ocrl protein_coding processed_transcript MGP_WSBEiJ_T0094566.1 MGP_WSBEiJ_G0034793.1 mouse_genomes_project X 42580892 42583995 + Ocrl protein_coding retained_intron MGP_WSBEiJ_T0094567.1 MGP_WSBEiJ_G0034793.1 mouse_genomes_project X 42581381 42635784 + MGP_WSBEiJ_P0094567 Ocrl protein_coding protein_coding MGP_WSBEiJ_T0094568.1 MGP_WSBEiJ_G0034793.1 mouse_genomes_project X 42599187 42600326 + Ocrl protein_coding retained_intron MGP_WSBEiJ_T0094569.1 MGP_WSBEiJ_G0034793.1 mouse_genomes_project X 42607389 42617728 + MGP_WSBEiJ_P0094569 Ocrl protein_coding protein_coding MGP_WSBEiJ_T0010979.1 MGP_WSBEiJ_G0009136.1 mouse_genomes_project X 61684896 61684971 - Mir470 miRNA miRNA MGP_WSBEiJ_T0095955.1 MGP_WSBEiJ_G0035183.1 mouse_genomes_project X 130604309 130622624 - MGP_WSBEiJ_P0095955 Nxf7 protein_coding protein_coding MGP_WSBEiJ_T0095956.1 MGP_WSBEiJ_G0035183.1 mouse_genomes_project X 130604314 130615069 - MGP_WSBEiJ_P0095956 Nxf7 protein_coding protein_coding MGP_WSBEiJ_T0095957.1 MGP_WSBEiJ_G0035183.1 mouse_genomes_project X 130609207 130610963 - Nxf7 protein_coding retained_intron MGP_WSBEiJ_T0095958.1 MGP_WSBEiJ_G0035183.1 mouse_genomes_project X 130614439 130624764 - MGP_WSBEiJ_P0095958 Nxf7 protein_coding protein_coding MGP_WSBEiJ_T0095959.1 MGP_WSBEiJ_G0035183.1 mouse_genomes_project X 130614622 130622712 - MGP_WSBEiJ_P0095959 Nxf7 protein_coding protein_coding MGP_WSBEiJ_T0009225.1 MGP_WSBEiJ_G0007417.1 mouse_genomes_project X 41144317 41456589 - lincRNA lincRNA MGP_WSBEiJ_T0096622.1 MGP_WSBEiJ_G0035362.1 mouse_genomes_project X 161974879 162043723 - MGP_WSBEiJ_P0096622 Egfl6 protein_coding protein_coding MGP_WSBEiJ_T0016292.1 MGP_WSBEiJ_G0014422.1 mouse_genomes_project X 151359883 151360790 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101143.1 MGP_WSBEiJ_G0039600.1 mouse_genomes_project X 69888851 69888989 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0095262.1 MGP_WSBEiJ_G0034973.1 mouse_genomes_project X 72383554 72539588 + MGP_WSBEiJ_P0095262 Tbl1x protein_coding protein_coding MGP_WSBEiJ_T0095263.1 MGP_WSBEiJ_G0034973.1 mouse_genomes_project X 72383755 72536347 + Tbl1x protein_coding retained_intron MGP_WSBEiJ_T0011036.1 MGP_WSBEiJ_G0009193.1 mouse_genomes_project X 152614070 152614172 + Gm23798 miRNA miRNA MGP_WSBEiJ_T0009300.1 MGP_WSBEiJ_G0007463.1 mouse_genomes_project X 162640529 162647745 + Gm15228 lincRNA lincRNA MGP_WSBEiJ_T0096052.1 MGP_WSBEiJ_G0035221.1 mouse_genomes_project X 134199359 134205320 - MGP_WSBEiJ_P0096052 Serpina7 protein_coding protein_coding MGP_WSBEiJ_T0096053.1 MGP_WSBEiJ_G0035221.1 mouse_genomes_project X 134199359 134205318 - MGP_WSBEiJ_P0096053 Serpina7 protein_coding protein_coding MGP_WSBEiJ_T0096054.1 MGP_WSBEiJ_G0035221.1 mouse_genomes_project X 134203588 134205339 - MGP_WSBEiJ_P0096054 Serpina7 protein_coding protein_coding MGP_WSBEiJ_T0016100.1 MGP_WSBEiJ_G0014230.1 mouse_genomes_project X 107883825 107884804 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095886.1 MGP_WSBEiJ_G0035164.1 mouse_genomes_project X 129153018 129176605 + MGP_WSBEiJ_P0095886 Arl13a protein_coding protein_coding MGP_WSBEiJ_T0094206.1 MGP_WSBEiJ_G0034674.1 mouse_genomes_project X 4598820 4599373 + MGP_WSBEiJ_P0094206 4930557A04Rik protein_coding protein_coding MGP_WSBEiJ_T0016091.1 MGP_WSBEiJ_G0014221.1 mouse_genomes_project X 106935407 106936052 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095382.1 MGP_WSBEiJ_G0035016.1 mouse_genomes_project X 89284508 89336842 + MGP_WSBEiJ_P0095382 Apoo protein_coding protein_coding MGP_WSBEiJ_T0095383.1 MGP_WSBEiJ_G0035016.1 mouse_genomes_project X 89284508 89333943 + MGP_WSBEiJ_P0095383 Apoo protein_coding protein_coding MGP_WSBEiJ_T0011578.1 MGP_WSBEiJ_G0009735.1 mouse_genomes_project X 133276320 133276579 - Gm24675 misc_RNA misc_RNA MGP_WSBEiJ_T0010991.1 MGP_WSBEiJ_G0009148.1 mouse_genomes_project X 67831123 67831189 + Mir2137 miRNA miRNA MGP_WSBEiJ_T0096010.1 MGP_WSBEiJ_G0035206.1 mouse_genomes_project X 131856853 131877870 - MGP_WSBEiJ_P0096010 Glra4 protein_coding protein_coding MGP_WSBEiJ_T0096011.1 MGP_WSBEiJ_G0035206.1 mouse_genomes_project X 131866184 131877870 - Glra4 protein_coding retained_intron MGP_WSBEiJ_T0015717.1 MGP_WSBEiJ_G0013847.1 mouse_genomes_project X 15831212 15832009 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016145.1 MGP_WSBEiJ_G0014275.1 mouse_genomes_project X 116867439 116868557 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095719.1 MGP_WSBEiJ_G0035105.1 mouse_genomes_project X 101314600 101333823 + MGP_WSBEiJ_P0095719 protein_coding protein_coding MGP_WSBEiJ_T0097143.1 MGP_WSBEiJ_G0035824.1 mouse_genomes_project X 65966863 65966981 + n-R5s8 rRNA rRNA MGP_WSBEiJ_T0015997.1 MGP_WSBEiJ_G0014127.1 mouse_genomes_project X 89932630 89933875 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016240.1 MGP_WSBEiJ_G0014370.1 mouse_genomes_project X 139437792 139438615 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094311.1 MGP_WSBEiJ_G0034706.1 mouse_genomes_project X 15282213 15284507 - MGP_WSBEiJ_P0094311 Ndufb11 protein_coding protein_coding MGP_WSBEiJ_T0016226.1 MGP_WSBEiJ_G0014356.1 mouse_genomes_project X 137085771 137086027 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099925.1 MGP_WSBEiJ_G0038588.1 mouse_genomes_project X 89379502 89379612 - Gm24595 snoRNA snoRNA MGP_WSBEiJ_T0098656.1 MGP_WSBEiJ_G0037319.1 mouse_genomes_project X 15477373 15477478 - Gm26065 snRNA snRNA MGP_WSBEiJ_T0096065.1 MGP_WSBEiJ_G0035225.1 mouse_genomes_project X 134458341 134462739 + MGP_WSBEiJ_P0096065 Trap1a protein_coding protein_coding MGP_WSBEiJ_T0095149.1 MGP_WSBEiJ_G0034947.1 mouse_genomes_project X 69268488 69271444 - MGP_WSBEiJ_P0095149 Ubl4a protein_coding protein_coding MGP_WSBEiJ_T0095150.1 MGP_WSBEiJ_G0034947.1 mouse_genomes_project X 69268489 69271329 - Ubl4a protein_coding processed_transcript MGP_WSBEiJ_T0095151.1 MGP_WSBEiJ_G0034947.1 mouse_genomes_project X 69270042 69271237 - MGP_WSBEiJ_P0095151 Ubl4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095152.1 MGP_WSBEiJ_G0034947.1 mouse_genomes_project X 69270080 69271267 - Ubl4a protein_coding retained_intron MGP_WSBEiJ_T0095153.1 MGP_WSBEiJ_G0034947.1 mouse_genomes_project X 69270235 69275979 - MGP_WSBEiJ_P0095153 Ubl4a protein_coding protein_coding MGP_WSBEiJ_T0095154.1 MGP_WSBEiJ_G0034947.1 mouse_genomes_project X 69270513 69271284 - Ubl4a protein_coding retained_intron MGP_WSBEiJ_T0095155.1 MGP_WSBEiJ_G0034947.1 mouse_genomes_project X 69270567 69271274 - Ubl4a protein_coding processed_transcript MGP_WSBEiJ_T0011032.1 MGP_WSBEiJ_G0009189.1 mouse_genomes_project X 145871687 145871748 - Mir3620 miRNA miRNA MGP_WSBEiJ_T0010926.1 MGP_WSBEiJ_G0009083.1 mouse_genomes_project X 1832161 1832270 - Mir501 miRNA miRNA MGP_WSBEiJ_T0096646.1 MGP_WSBEiJ_G0035369.1 mouse_genomes_project X 164275013 164787849 + MGP_WSBEiJ_P0096646 Arhgap6 protein_coding protein_coding MGP_WSBEiJ_T0096647.1 MGP_WSBEiJ_G0035369.1 mouse_genomes_project X 164526410 164744272 + Arhgap6 protein_coding retained_intron MGP_WSBEiJ_T0096648.1 MGP_WSBEiJ_G0035369.1 mouse_genomes_project X 164526410 164746806 + MGP_WSBEiJ_P0096648 Arhgap6 protein_coding protein_coding MGP_WSBEiJ_T0096649.1 MGP_WSBEiJ_G0035369.1 mouse_genomes_project X 164526410 164751684 + MGP_WSBEiJ_P0096649 Arhgap6 protein_coding protein_coding MGP_WSBEiJ_T0096650.1 MGP_WSBEiJ_G0035369.1 mouse_genomes_project X 164526410 164787849 + MGP_WSBEiJ_P0096650 Arhgap6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096651.1 MGP_WSBEiJ_G0035369.1 mouse_genomes_project X 164526410 164787849 + MGP_WSBEiJ_P0096651 Arhgap6 protein_coding protein_coding MGP_WSBEiJ_T0096652.1 MGP_WSBEiJ_G0035369.1 mouse_genomes_project X 164606708 164787849 + MGP_WSBEiJ_P0096652 Arhgap6 protein_coding protein_coding MGP_WSBEiJ_T0096658.1 MGP_WSBEiJ_G0035369.1 mouse_genomes_project X 164711974 164778525 + MGP_WSBEiJ_P0096658 Arhgap6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096412.1 MGP_WSBEiJ_G0035311.1 mouse_genomes_project X 153005778 153008645 - MGP_WSBEiJ_P0096412 Yy2 protein_coding protein_coding MGP_WSBEiJ_T0098687.1 MGP_WSBEiJ_G0037350.1 mouse_genomes_project X 100135737 100135848 - Gm22090 snRNA snRNA MGP_WSBEiJ_T0011004.1 MGP_WSBEiJ_G0009161.1 mouse_genomes_project X 97197336 97197432 - Gm26318 miRNA miRNA MGP_WSBEiJ_T0094599.1 MGP_WSBEiJ_G0034803.1 mouse_genomes_project X 43244861 43298118 - MGP_WSBEiJ_P0094599 Zfp280c protein_coding protein_coding MGP_WSBEiJ_T0094600.1 MGP_WSBEiJ_G0034803.1 mouse_genomes_project X 43244861 43295888 - MGP_WSBEiJ_P0094600 Zfp280c protein_coding protein_coding MGP_WSBEiJ_T0094601.1 MGP_WSBEiJ_G0034803.1 mouse_genomes_project X 43244861 43298197 - MGP_WSBEiJ_P0094601 Zfp280c protein_coding protein_coding MGP_WSBEiJ_T0094602.1 MGP_WSBEiJ_G0034803.1 mouse_genomes_project X 43244862 43295516 - MGP_WSBEiJ_P0094602 Zfp280c protein_coding protein_coding MGP_WSBEiJ_T0094603.1 MGP_WSBEiJ_G0034803.1 mouse_genomes_project X 43245994 43246941 - Zfp280c protein_coding retained_intron MGP_WSBEiJ_T0094604.1 MGP_WSBEiJ_G0034803.1 mouse_genomes_project X 43282182 43298136 - Zfp280c protein_coding processed_transcript MGP_WSBEiJ_T0094605.1 MGP_WSBEiJ_G0034803.1 mouse_genomes_project X 43289855 43298249 - Zfp280c protein_coding processed_transcript MGP_WSBEiJ_T0096017.1 MGP_WSBEiJ_G0035209.1 mouse_genomes_project X 132031187 132032239 + MGP_WSBEiJ_P0096017 H2bfm protein_coding protein_coding MGP_WSBEiJ_T0101135.1 MGP_WSBEiJ_G0039592.1 mouse_genomes_project X 41207254 41208027 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016018.1 MGP_WSBEiJ_G0014148.1 mouse_genomes_project X 94703236 94704430 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009236.1 MGP_WSBEiJ_G0007424.1 mouse_genomes_project X 63458498 63471090 - Fmr1os lincRNA lincRNA MGP_WSBEiJ_T0097178.1 MGP_WSBEiJ_G0035859.1 mouse_genomes_project X 53943870 53944102 - Gm26351 ribozyme ribozyme MGP_WSBEiJ_T0095534.1 MGP_WSBEiJ_G0035055.1 mouse_genomes_project X 95991917 96117958 - MGP_WSBEiJ_P0095534 Snx12 protein_coding protein_coding MGP_WSBEiJ_T0095535.1 MGP_WSBEiJ_G0035055.1 mouse_genomes_project X 96107473 96117968 - MGP_WSBEiJ_P0095535 Snx12 protein_coding protein_coding MGP_WSBEiJ_T0095536.1 MGP_WSBEiJ_G0035055.1 mouse_genomes_project X 96107473 96117954 - MGP_WSBEiJ_P0095536 Snx12 protein_coding protein_coding MGP_WSBEiJ_T0095537.1 MGP_WSBEiJ_G0035055.1 mouse_genomes_project X 96108963 96110016 - Snx12 protein_coding processed_transcript MGP_WSBEiJ_T0009227.1 MGP_WSBEiJ_G0007419.1 mouse_genomes_project X 47733289 47734711 - Gm28730 lincRNA lincRNA MGP_WSBEiJ_T0009228.1 MGP_WSBEiJ_G0007419.1 mouse_genomes_project X 47733297 47734695 - Gm28730 lincRNA lincRNA MGP_WSBEiJ_T0009229.1 MGP_WSBEiJ_G0007419.1 mouse_genomes_project X 47733402 47735255 - Gm28730 lincRNA lincRNA MGP_WSBEiJ_T0095907.1 MGP_WSBEiJ_G0035170.1 mouse_genomes_project X 129515877 129520475 - MGP_WSBEiJ_P0095907 protein_coding protein_coding MGP_WSBEiJ_T0094887.1 MGP_WSBEiJ_G0034907.1 mouse_genomes_project X 68078703 68081209 + MGP_WSBEiJ_P0094887 F8a protein_coding protein_coding MGP_WSBEiJ_T0099901.1 MGP_WSBEiJ_G0038564.1 mouse_genomes_project X 16204462 16204603 - Gm22592 snoRNA snoRNA MGP_WSBEiJ_T0094112.1 MGP_WSBEiJ_G0034640.1 mouse_genomes_project X 2544820 2549160 - MGP_WSBEiJ_P0094112 Eras protein_coding protein_coding MGP_WSBEiJ_T0096046.1 MGP_WSBEiJ_G0035219.1 mouse_genomes_project X 133335476 133336892 - MGP_WSBEiJ_P0096046 Tex13a protein_coding protein_coding MGP_WSBEiJ_T0015961.1 MGP_WSBEiJ_G0014091.1 mouse_genomes_project X 84846853 84850342 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016108.1 MGP_WSBEiJ_G0014238.1 mouse_genomes_project X 109183976 109186233 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0095771.1 MGP_WSBEiJ_G0035123.1 mouse_genomes_project X 104234292 104306859 + MGP_WSBEiJ_P0095771 Sh3bgrl protein_coding protein_coding MGP_WSBEiJ_T0095772.1 MGP_WSBEiJ_G0035123.1 mouse_genomes_project X 104234436 104341645 + Sh3bgrl protein_coding processed_transcript MGP_WSBEiJ_T0095773.1 MGP_WSBEiJ_G0035123.1 mouse_genomes_project X 104253335 104298756 + Sh3bgrl protein_coding processed_transcript MGP_WSBEiJ_T0015662.1 MGP_WSBEiJ_G0013792.1 mouse_genomes_project X 2662085 2662953 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096541.1 MGP_WSBEiJ_G0035340.1 mouse_genomes_project X 159434332 159461264 + MGP_WSBEiJ_P0096541 Ap1s2 protein_coding protein_coding MGP_WSBEiJ_T0096542.1 MGP_WSBEiJ_G0035340.1 mouse_genomes_project X 159434457 159460957 + MGP_WSBEiJ_P0096542 Ap1s2 protein_coding protein_coding MGP_WSBEiJ_T0096543.1 MGP_WSBEiJ_G0035340.1 mouse_genomes_project X 159434460 159457131 + MGP_WSBEiJ_P0096543 Ap1s2 protein_coding protein_coding MGP_WSBEiJ_T0096544.1 MGP_WSBEiJ_G0035340.1 mouse_genomes_project X 159436716 159460954 + MGP_WSBEiJ_P0096544 Ap1s2 protein_coding protein_coding MGP_WSBEiJ_T0015879.1 MGP_WSBEiJ_G0014009.1 mouse_genomes_project X 65466238 65466614 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015849.1 MGP_WSBEiJ_G0013979.1 mouse_genomes_project X 58956105 58956458 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094741.1 MGP_WSBEiJ_G0034856.1 mouse_genomes_project X 52283416 52292870 - MGP_WSBEiJ_P0094741 Rbmx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094742.1 MGP_WSBEiJ_G0034856.1 mouse_genomes_project X 52285913 52292925 - MGP_WSBEiJ_P0094742 Rbmx protein_coding protein_coding MGP_WSBEiJ_T0094743.1 MGP_WSBEiJ_G0034856.1 mouse_genomes_project X 52286966 52292864 - MGP_WSBEiJ_P0094743 Rbmx protein_coding protein_coding MGP_WSBEiJ_T0094744.1 MGP_WSBEiJ_G0034856.1 mouse_genomes_project X 52290028 52292686 - MGP_WSBEiJ_P0094744 Rbmx protein_coding protein_coding MGP_WSBEiJ_T0015723.1 MGP_WSBEiJ_G0013853.1 mouse_genomes_project X 17133750 17134293 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009283.1 MGP_WSBEiJ_G0007454.1 mouse_genomes_project X 147642338 147672003 - Kantr lincRNA lincRNA MGP_WSBEiJ_T0009284.1 MGP_WSBEiJ_G0007454.1 mouse_genomes_project X 147642490 147672003 - Kantr lincRNA lincRNA MGP_WSBEiJ_T0009285.1 MGP_WSBEiJ_G0007454.1 mouse_genomes_project X 147642490 147672003 - Kantr lincRNA lincRNA MGP_WSBEiJ_T0009286.1 MGP_WSBEiJ_G0007454.1 mouse_genomes_project X 147642567 147671971 - Kantr lincRNA lincRNA MGP_WSBEiJ_T0009287.1 MGP_WSBEiJ_G0007454.1 mouse_genomes_project X 147659011 147662519 - Kantr lincRNA lincRNA MGP_WSBEiJ_T0009288.1 MGP_WSBEiJ_G0007454.1 mouse_genomes_project X 147659107 147671978 - Kantr lincRNA lincRNA MGP_WSBEiJ_T0009289.1 MGP_WSBEiJ_G0007454.1 mouse_genomes_project X 147664304 147671978 - Kantr lincRNA lincRNA MGP_WSBEiJ_T0094747.1 MGP_WSBEiJ_G0034859.1 mouse_genomes_project X 52910150 52918884 + MGP_WSBEiJ_P0094747 Zic3 protein_coding protein_coding MGP_WSBEiJ_T0094748.1 MGP_WSBEiJ_G0034859.1 mouse_genomes_project X 52918078 52923997 + MGP_WSBEiJ_P0094748 Zic3 protein_coding protein_coding MGP_WSBEiJ_T0094749.1 MGP_WSBEiJ_G0034859.1 mouse_genomes_project X 52918434 52923997 + MGP_WSBEiJ_P0094749 Zic3 protein_coding protein_coding MGP_WSBEiJ_T0094750.1 MGP_WSBEiJ_G0034859.1 mouse_genomes_project X 52918445 52929160 + MGP_WSBEiJ_P0094750 Zic3 protein_coding protein_coding MGP_WSBEiJ_T0094692.1 MGP_WSBEiJ_G0034843.1 mouse_genomes_project X 51304323 51360495 + Ddx26b protein_coding processed_transcript MGP_WSBEiJ_T0094693.1 MGP_WSBEiJ_G0034843.1 mouse_genomes_project X 51304343 51360494 + MGP_WSBEiJ_P0094693 Ddx26b protein_coding protein_coding MGP_WSBEiJ_T0094694.1 MGP_WSBEiJ_G0034843.1 mouse_genomes_project X 51304346 51348394 + MGP_WSBEiJ_P0094694 Ddx26b protein_coding protein_coding MGP_WSBEiJ_T0094695.1 MGP_WSBEiJ_G0034843.1 mouse_genomes_project X 51304351 51360498 + MGP_WSBEiJ_P0094695 Ddx26b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0094696.1 MGP_WSBEiJ_G0034843.1 mouse_genomes_project X 51304351 51360495 + MGP_WSBEiJ_P0094696 Ddx26b protein_coding protein_coding MGP_WSBEiJ_T0094697.1 MGP_WSBEiJ_G0034843.1 mouse_genomes_project X 51334344 51360493 + MGP_WSBEiJ_P0094697 Ddx26b protein_coding protein_coding MGP_WSBEiJ_T0094698.1 MGP_WSBEiJ_G0034843.1 mouse_genomes_project X 51357738 51360339 + MGP_WSBEiJ_P0094698 Ddx26b protein_coding protein_coding MGP_WSBEiJ_T0015995.1 MGP_WSBEiJ_G0014125.1 mouse_genomes_project X 89708674 89709374 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096358.1 MGP_WSBEiJ_G0035290.1 mouse_genomes_project X 148144339 148158893 + Gpr143 protein_coding processed_transcript MGP_WSBEiJ_T0096359.1 MGP_WSBEiJ_G0035290.1 mouse_genomes_project X 148144404 148172166 + MGP_WSBEiJ_P0096359 Gpr143 protein_coding protein_coding MGP_WSBEiJ_T0096360.1 MGP_WSBEiJ_G0035290.1 mouse_genomes_project X 148144436 148154234 + Gpr143 protein_coding retained_intron MGP_WSBEiJ_T0016110.1 MGP_WSBEiJ_G0014240.1 mouse_genomes_project X 109587459 109588820 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015747.1 MGP_WSBEiJ_G0013877.1 mouse_genomes_project X 34678626 34680078 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094910.1 MGP_WSBEiJ_G0034916.1 mouse_genomes_project X 68500602 68504700 + MGP_WSBEiJ_P0094910 Dusp9 protein_coding protein_coding MGP_WSBEiJ_T0015862.1 MGP_WSBEiJ_G0013992.1 mouse_genomes_project X 62000985 62001603 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015665.1 MGP_WSBEiJ_G0013795.1 mouse_genomes_project X 2676362 2676533 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011023.1 MGP_WSBEiJ_G0009180.1 mouse_genomes_project X 139047924 139048046 - miRNA miRNA MGP_WSBEiJ_T0095465.1 MGP_WSBEiJ_G0035037.1 mouse_genomes_project X 93874968 93942966 + MGP_WSBEiJ_P0095465 Stard8 protein_coding protein_coding MGP_WSBEiJ_T0095466.1 MGP_WSBEiJ_G0035037.1 mouse_genomes_project X 93918117 93952016 + MGP_WSBEiJ_P0095466 Stard8 protein_coding protein_coding MGP_WSBEiJ_T0095467.1 MGP_WSBEiJ_G0035037.1 mouse_genomes_project X 93919459 93943117 + Stard8 protein_coding processed_transcript MGP_WSBEiJ_T0095468.1 MGP_WSBEiJ_G0035037.1 mouse_genomes_project X 93945899 93947736 + Stard8 protein_coding processed_transcript MGP_WSBEiJ_T0009257.1 MGP_WSBEiJ_G0007439.1 mouse_genomes_project X 98621699 98687921 - Ftx lincRNA lincRNA MGP_WSBEiJ_T0009258.1 MGP_WSBEiJ_G0007439.1 mouse_genomes_project X 98623688 98680151 - Ftx lincRNA lincRNA MGP_WSBEiJ_T0009259.1 MGP_WSBEiJ_G0007439.1 mouse_genomes_project X 98630359 98687830 - Ftx lincRNA lincRNA MGP_WSBEiJ_T0009260.1 MGP_WSBEiJ_G0007439.1 mouse_genomes_project X 98630359 98680060 - Ftx lincRNA lincRNA MGP_WSBEiJ_T0009261.1 MGP_WSBEiJ_G0007439.1 mouse_genomes_project X 98670982 98687921 - Ftx lincRNA lincRNA MGP_WSBEiJ_T0009262.1 MGP_WSBEiJ_G0007439.1 mouse_genomes_project X 98671035 98686667 - Ftx lincRNA lincRNA MGP_WSBEiJ_T0095828.1 MGP_WSBEiJ_G0035143.1 mouse_genomes_project X 111481493 111504668 + MGP_WSBEiJ_P0095828 Cpxcr1 protein_coding protein_coding MGP_WSBEiJ_T0010992.1 MGP_WSBEiJ_G0009149.1 mouse_genomes_project X 68903196 68903267 - Mir5132 miRNA miRNA MGP_WSBEiJ_T0015754.1 MGP_WSBEiJ_G0013884.1 mouse_genomes_project X 36380800 36382110 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015833.1 MGP_WSBEiJ_G0013963.1 mouse_genomes_project X 56357251 56358094 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011030.1 MGP_WSBEiJ_G0009187.1 mouse_genomes_project X 142298834 142298972 + Gm24627 miRNA miRNA MGP_WSBEiJ_T0095630.1 MGP_WSBEiJ_G0035076.1 mouse_genomes_project X 97229000 97446900 - MGP_WSBEiJ_P0095630 Hdac8 protein_coding protein_coding MGP_WSBEiJ_T0095631.1 MGP_WSBEiJ_G0035076.1 mouse_genomes_project X 97350670 97446622 - MGP_WSBEiJ_P0095631 Hdac8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0095632.1 MGP_WSBEiJ_G0035076.1 mouse_genomes_project X 97352625 97446687 - Hdac8 protein_coding processed_transcript MGP_WSBEiJ_T0095633.1 MGP_WSBEiJ_G0035076.1 mouse_genomes_project X 97359365 97446886 - Hdac8 protein_coding processed_transcript MGP_WSBEiJ_T0095634.1 MGP_WSBEiJ_G0035076.1 mouse_genomes_project X 97439639 97446284 - Hdac8 protein_coding retained_intron MGP_WSBEiJ_T0101148.1 MGP_WSBEiJ_G0039605.1 mouse_genomes_project X 81072806 81073839 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015715.1 MGP_WSBEiJ_G0013845.1 mouse_genomes_project X 15525659 15526029 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016299.1 MGP_WSBEiJ_G0014429.1 mouse_genomes_project X 153047011 153047143 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094355.1 MGP_WSBEiJ_G0034716.1 mouse_genomes_project X 15629417 15649772 - Uxt protein_coding processed_transcript MGP_WSBEiJ_T0094356.1 MGP_WSBEiJ_G0034716.1 mouse_genomes_project X 15639439 15649798 - MGP_WSBEiJ_P0094356 Uxt protein_coding protein_coding MGP_WSBEiJ_T0094357.1 MGP_WSBEiJ_G0034716.1 mouse_genomes_project X 15639700 15649696 - Uxt protein_coding retained_intron MGP_WSBEiJ_T0094358.1 MGP_WSBEiJ_G0034716.1 mouse_genomes_project X 15639706 15649781 - Uxt protein_coding processed_transcript MGP_WSBEiJ_T0094359.1 MGP_WSBEiJ_G0034716.1 mouse_genomes_project X 15646844 15649767 - Uxt protein_coding retained_intron MGP_WSBEiJ_T0094360.1 MGP_WSBEiJ_G0034716.1 mouse_genomes_project X 15649199 15649755 - Uxt protein_coding processed_transcript MGP_WSBEiJ_T0095379.1 MGP_WSBEiJ_G0035015.1 mouse_genomes_project X 89270984 89284132 - MGP_WSBEiJ_P0095379 Fam90a1b protein_coding protein_coding MGP_WSBEiJ_T0095380.1 MGP_WSBEiJ_G0035015.1 mouse_genomes_project X 89271803 89282966 - MGP_WSBEiJ_P0095380 Fam90a1b protein_coding protein_coding MGP_WSBEiJ_T0095381.1 MGP_WSBEiJ_G0035015.1 mouse_genomes_project X 89273087 89283405 - MGP_WSBEiJ_P0095381 Fam90a1b protein_coding protein_coding MGP_WSBEiJ_T0101132.1 MGP_WSBEiJ_G0039589.1 mouse_genomes_project X 32423652 32424163 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0094636.1 MGP_WSBEiJ_G0034813.1 mouse_genomes_project X 44534403 44535336 - MGP_WSBEiJ_P0094636 Olfr1322 protein_coding protein_coding MGP_WSBEiJ_T0095192.1 MGP_WSBEiJ_G0034952.1 mouse_genomes_project X 69474038 69474974 - MGP_WSBEiJ_P0095192 Olfr1326-ps1 protein_coding protein_coding MGP_WSBEiJ_T0005508.1 MGP_WSBEiJ_G0004639.1 mouse_genomes_project X 64148417 64153091 - Gm14705 antisense antisense MGP_WSBEiJ_T0005509.1 MGP_WSBEiJ_G0004639.1 mouse_genomes_project X 64149779 64152163 - Gm14705 antisense antisense MGP_WSBEiJ_T0015749.1 MGP_WSBEiJ_G0013879.1 mouse_genomes_project X 35335003 35335563 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094240.1 MGP_WSBEiJ_G0034684.1 mouse_genomes_project X 7492703 7580207 - MGP_WSBEiJ_P0094240 Med14 protein_coding protein_coding MGP_WSBEiJ_T0094241.1 MGP_WSBEiJ_G0034684.1 mouse_genomes_project X 7496368 7533358 - MGP_WSBEiJ_P0094241 Med14 protein_coding protein_coding MGP_WSBEiJ_T0094242.1 MGP_WSBEiJ_G0034684.1 mouse_genomes_project X 7497082 7580207 - Med14 protein_coding retained_intron MGP_WSBEiJ_T0094243.1 MGP_WSBEiJ_G0034684.1 mouse_genomes_project X 7523593 7531172 - Med14 protein_coding retained_intron MGP_WSBEiJ_T0094244.1 MGP_WSBEiJ_G0034684.1 mouse_genomes_project X 7526348 7580207 - MGP_WSBEiJ_P0094244 Med14 protein_coding protein_coding MGP_WSBEiJ_T0010965.1 MGP_WSBEiJ_G0009122.1 mouse_genomes_project X 55278075 55278165 - Mir505 miRNA miRNA MGP_WSBEiJ_T0015936.1 MGP_WSBEiJ_G0014066.1 mouse_genomes_project X 80499797 80500234 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101133.1 MGP_WSBEiJ_G0039590.1 mouse_genomes_project X 32587876 32588886 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098716.1 MGP_WSBEiJ_G0037379.1 mouse_genomes_project X 157560653 157560740 + Gm26317 snRNA snRNA MGP_WSBEiJ_T0015695.1 MGP_WSBEiJ_G0013825.1 mouse_genomes_project X 10273400 10273737 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016254.1 MGP_WSBEiJ_G0014384.1 mouse_genomes_project X 141024579 141025397 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015817.1 MGP_WSBEiJ_G0013947.1 mouse_genomes_project X 53115469 53116149 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010943.1 MGP_WSBEiJ_G0009100.1 mouse_genomes_project X 36304533 36304618 + Gm22413 miRNA miRNA MGP_WSBEiJ_T0096365.1 MGP_WSBEiJ_G0035294.1 mouse_genomes_project X 148508758 148542213 + MGP_WSBEiJ_P0096365 Rragb protein_coding protein_coding MGP_WSBEiJ_T0096366.1 MGP_WSBEiJ_G0035294.1 mouse_genomes_project X 148508764 148521964 + MGP_WSBEiJ_P0096366 Rragb protein_coding protein_coding MGP_WSBEiJ_T0016272.1 MGP_WSBEiJ_G0014402.1 mouse_genomes_project X 146508825 146509210 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016119.1 MGP_WSBEiJ_G0014249.1 mouse_genomes_project X 111237333 111237668 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016073.1 MGP_WSBEiJ_G0014203.1 mouse_genomes_project X 101909927 101910333 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016220.1 MGP_WSBEiJ_G0014350.1 mouse_genomes_project X 136842904 136843414 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096319.1 MGP_WSBEiJ_G0035281.1 mouse_genomes_project X 147334504 147338074 + MGP_WSBEiJ_P0096319 Hsd17b10 protein_coding protein_coding MGP_WSBEiJ_T0096320.1 MGP_WSBEiJ_G0035281.1 mouse_genomes_project X 147334504 147338074 + MGP_WSBEiJ_P0096320 Hsd17b10 protein_coding protein_coding MGP_WSBEiJ_T0096321.1 MGP_WSBEiJ_G0035281.1 mouse_genomes_project X 147334808 147338074 + Hsd17b10 protein_coding processed_transcript MGP_WSBEiJ_T0096322.1 MGP_WSBEiJ_G0035281.1 mouse_genomes_project X 147337028 147338074 + Hsd17b10 protein_coding retained_intron MGP_WSBEiJ_T0096553.1 MGP_WSBEiJ_G0035342.1 mouse_genomes_project X 159505096 159557959 - MGP_WSBEiJ_P0096553 Car5b protein_coding protein_coding MGP_WSBEiJ_T0096554.1 MGP_WSBEiJ_G0035342.1 mouse_genomes_project X 159541564 159557943 - Car5b protein_coding retained_intron MGP_WSBEiJ_T0009275.1 MGP_WSBEiJ_G0007449.1 mouse_genomes_project X 135962131 135987918 + Eif2c5 lincRNA lincRNA MGP_WSBEiJ_T0016093.1 MGP_WSBEiJ_G0014223.1 mouse_genomes_project X 107129235 107129968 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016158.1 MGP_WSBEiJ_G0014288.1 mouse_genomes_project X 124508802 124509588 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016350.1 MGP_WSBEiJ_G0014480.1 mouse_genomes_project X 163562712 163563181 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016183.1 MGP_WSBEiJ_G0014313.1 mouse_genomes_project X 129835740 129836602 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015839.1 MGP_WSBEiJ_G0013969.1 mouse_genomes_project X 57001299 57002529 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015789.1 MGP_WSBEiJ_G0013919.1 mouse_genomes_project X 45835931 45837048 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010964.1 MGP_WSBEiJ_G0009121.1 mouse_genomes_project X 54584004 54584095 - Gm44500 miRNA miRNA MGP_WSBEiJ_T0016049.1 MGP_WSBEiJ_G0014179.1 mouse_genomes_project X 98588574 98588799 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0094277.1 MGP_WSBEiJ_G0034693.1 mouse_genomes_project X 11366269 11443628 + MGP_WSBEiJ_P0094277 Maoa protein_coding protein_coding MGP_WSBEiJ_T0098711.1 MGP_WSBEiJ_G0037374.1 mouse_genomes_project X 146726026 146726176 + Gm22248 snRNA snRNA MGP_WSBEiJ_T0060047.1 MGP_WSBEiJ_G0026524.1 mouse_genomes_project 3 66058513 66102644 - MGP_WSBEiJ_P0060047 Rarres1 protein_coding protein_coding MGP_WSBEiJ_T0013688.1 MGP_WSBEiJ_G0011818.1 mouse_genomes_project 3 56019411 56019907 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061567.1 MGP_WSBEiJ_G0026878.1 mouse_genomes_project 3 97698676 97750992 - MGP_WSBEiJ_P0061567 Chd1l protein_coding protein_coding MGP_WSBEiJ_T0061568.1 MGP_WSBEiJ_G0026878.1 mouse_genomes_project 3 97698949 97750960 - MGP_WSBEiJ_P0061568 Chd1l protein_coding unknown_likely_coding MGP_WSBEiJ_T0061569.1 MGP_WSBEiJ_G0026878.1 mouse_genomes_project 3 97701329 97706300 - Chd1l protein_coding retained_intron MGP_WSBEiJ_T0061570.1 MGP_WSBEiJ_G0026878.1 mouse_genomes_project 3 97710222 97750981 - Chd1l protein_coding retained_intron MGP_WSBEiJ_T0013952.1 MGP_WSBEiJ_G0012082.1 mouse_genomes_project 3 142297938 142299577 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062105.1 MGP_WSBEiJ_G0027011.1 mouse_genomes_project 3 109062098 109146743 + MGP_WSBEiJ_P0062105 Sort1 protein_coding protein_coding MGP_WSBEiJ_T0062106.1 MGP_WSBEiJ_G0027011.1 mouse_genomes_project 3 109062107 109146811 + MGP_WSBEiJ_P0062106 Sort1 protein_coding protein_coding MGP_WSBEiJ_T0062107.1 MGP_WSBEiJ_G0027011.1 mouse_genomes_project 3 109140766 109146738 + Sort1 protein_coding retained_intron MGP_WSBEiJ_T0007520.1 MGP_WSBEiJ_G0006156.1 mouse_genomes_project 3 100858258 100892455 + Gm12474 lincRNA lincRNA MGP_WSBEiJ_T0060802.1 MGP_WSBEiJ_G0026679.1 mouse_genomes_project 3 88888493 88890299 - MGP_WSBEiJ_P0060802 Lenep protein_coding protein_coding MGP_WSBEiJ_T0017390.1 MGP_WSBEiJ_G0014939.1 mouse_genomes_project 3 107201380 107205311 - 2010016I18Rik processed_transcript antisense MGP_WSBEiJ_T0017391.1 MGP_WSBEiJ_G0014939.1 mouse_genomes_project 3 107201398 107203224 - 2010016I18Rik processed_transcript antisense MGP_WSBEiJ_T0017392.1 MGP_WSBEiJ_G0014939.1 mouse_genomes_project 3 107201411 107202836 - 2010016I18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017393.1 MGP_WSBEiJ_G0014939.1 mouse_genomes_project 3 107201411 107202851 - 2010016I18Rik processed_transcript retained_intron MGP_WSBEiJ_T0017394.1 MGP_WSBEiJ_G0014939.1 mouse_genomes_project 3 107203459 107205246 - 2010016I18Rik processed_transcript retained_intron MGP_WSBEiJ_T0013867.1 MGP_WSBEiJ_G0011997.1 mouse_genomes_project 3 113186165 113186466 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060328.1 MGP_WSBEiJ_G0026593.1 mouse_genomes_project 3 85241000 85354850 + Sh3d19 protein_coding processed_transcript MGP_WSBEiJ_T0060330.1 MGP_WSBEiJ_G0026593.1 mouse_genomes_project 3 85309480 85354606 + Sh3d19 protein_coding processed_transcript MGP_WSBEiJ_T0060331.1 MGP_WSBEiJ_G0026593.1 mouse_genomes_project 3 85311218 85354894 + Sh3d19 protein_coding processed_transcript MGP_WSBEiJ_T0060332.1 MGP_WSBEiJ_G0026593.1 mouse_genomes_project 3 85311326 85354883 + Sh3d19 protein_coding processed_transcript MGP_WSBEiJ_T0060333.1 MGP_WSBEiJ_G0026593.1 mouse_genomes_project 3 85341877 85401098 + MGP_WSBEiJ_P0060333 Sh3d19 protein_coding protein_coding MGP_WSBEiJ_T0060334.1 MGP_WSBEiJ_G0026593.1 mouse_genomes_project 3 85355745 85401094 + MGP_WSBEiJ_P0060334 Sh3d19 protein_coding protein_coding MGP_WSBEiJ_T0060335.1 MGP_WSBEiJ_G0026593.1 mouse_genomes_project 3 85395901 85399682 + Sh3d19 protein_coding retained_intron MGP_WSBEiJ_T0098221.1 MGP_WSBEiJ_G0036884.1 mouse_genomes_project 3 140398511 140398670 + Gm23467 snRNA snRNA MGP_WSBEiJ_T0062039.1 MGP_WSBEiJ_G0026994.1 mouse_genomes_project 3 108624579 108640218 + MGP_WSBEiJ_P0062039 Eps8l3 protein_coding protein_coding MGP_WSBEiJ_T0062040.1 MGP_WSBEiJ_G0026994.1 mouse_genomes_project 3 108624594 108628604 + Eps8l3 protein_coding processed_transcript MGP_WSBEiJ_T0062041.1 MGP_WSBEiJ_G0026994.1 mouse_genomes_project 3 108624612 108628980 + MGP_WSBEiJ_P0062041 Eps8l3 protein_coding protein_coding MGP_WSBEiJ_T0059292.1 MGP_WSBEiJ_G0026379.1 mouse_genomes_project 3 29915584 29937659 - MGP_WSBEiJ_P0059292 Kcnmb3 protein_coding protein_coding MGP_WSBEiJ_T0013720.1 MGP_WSBEiJ_G0011850.1 mouse_genomes_project 3 64694239 64694498 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059774.1 MGP_WSBEiJ_G0026460.1 mouse_genomes_project 3 53068374 53087006 - MGP_WSBEiJ_P0059774 Sertm1 protein_coding protein_coding MGP_WSBEiJ_T0059775.1 MGP_WSBEiJ_G0026460.1 mouse_genomes_project 3 53068377 53087862 - MGP_WSBEiJ_P0059775 Sertm1 protein_coding protein_coding MGP_WSBEiJ_T0007625.1 MGP_WSBEiJ_G0006243.1 mouse_genomes_project 3 146003806 146046525 - Gm6260 lincRNA lincRNA MGP_WSBEiJ_T0007626.1 MGP_WSBEiJ_G0006243.1 mouse_genomes_project 3 146027557 146046592 - Gm6260 lincRNA lincRNA MGP_WSBEiJ_T0099431.1 MGP_WSBEiJ_G0038094.1 mouse_genomes_project 3 48806922 48807057 - Gm24503 snoRNA snoRNA MGP_WSBEiJ_T0059980.1 MGP_WSBEiJ_G0026507.1 mouse_genomes_project 3 62426218 62482408 + MGP_WSBEiJ_P0059980 Gmps protein_coding protein_coding MGP_WSBEiJ_T0007609.1 MGP_WSBEiJ_G0006229.1 mouse_genomes_project 3 141903183 141906820 - Gm32693 lincRNA lincRNA MGP_WSBEiJ_T0013566.1 MGP_WSBEiJ_G0011696.1 mouse_genomes_project 3 13112965 13113140 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060671.1 MGP_WSBEiJ_G0026659.1 mouse_genomes_project 3 88603375 88613817 + MGP_WSBEiJ_P0060671 Pklr protein_coding protein_coding MGP_WSBEiJ_T0060672.1 MGP_WSBEiJ_G0026659.1 mouse_genomes_project 3 88603407 88604693 + Pklr protein_coding processed_transcript MGP_WSBEiJ_T0060673.1 MGP_WSBEiJ_G0026659.1 mouse_genomes_project 3 88603805 88614002 + MGP_WSBEiJ_P0060673 Pklr protein_coding protein_coding MGP_WSBEiJ_T0060674.1 MGP_WSBEiJ_G0026659.1 mouse_genomes_project 3 88603812 88608764 + MGP_WSBEiJ_P0060674 Pklr protein_coding protein_coding MGP_WSBEiJ_T0060675.1 MGP_WSBEiJ_G0026659.1 mouse_genomes_project 3 88603856 88608137 + Pklr protein_coding processed_transcript MGP_WSBEiJ_T0097350.1 MGP_WSBEiJ_G0036024.1 mouse_genomes_project 3 103591245 103592861 + Gm43063 sense_intronic sense_intronic MGP_WSBEiJ_T0061069.1 MGP_WSBEiJ_G0026765.1 mouse_genomes_project 3 92677919 92679355 - MGP_WSBEiJ_P0061069 protein_coding protein_coding MGP_WSBEiJ_T0013839.1 MGP_WSBEiJ_G0011969.1 mouse_genomes_project 3 103363753 103364042 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007505.1 MGP_WSBEiJ_G0006142.1 mouse_genomes_project 3 95324948 95335826 - lincRNA lincRNA MGP_WSBEiJ_T0001167.1 MGP_WSBEiJ_G0001098.1 mouse_genomes_project 3 49932593 49935669 - TEC TEC MGP_WSBEiJ_T0001168.1 MGP_WSBEiJ_G0001098.1 mouse_genomes_project 3 49932594 49935669 - TEC pseudogene MGP_WSBEiJ_T0100806.1 MGP_WSBEiJ_G0039264.1 mouse_genomes_project 3 144948508 144959375 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007615.1 MGP_WSBEiJ_G0006234.1 mouse_genomes_project 3 145313135 145333503 + 4930519L02Rik lincRNA lincRNA MGP_WSBEiJ_T0007641.1 MGP_WSBEiJ_G0006256.1 mouse_genomes_project 3 150012910 150017218 + Gm37041 lincRNA lincRNA MGP_WSBEiJ_T0059908.1 MGP_WSBEiJ_G0026492.1 mouse_genomes_project 3 58237609 58251009 + MGP_WSBEiJ_P0059908 protein_coding protein_coding MGP_WSBEiJ_T0098227.1 MGP_WSBEiJ_G0036890.1 mouse_genomes_project 3 158777332 158777436 - Gm23038 snRNA snRNA MGP_WSBEiJ_T0060126.1 MGP_WSBEiJ_G0026545.1 mouse_genomes_project 3 73912541 74021868 - MGP_WSBEiJ_P0060126 Zbbx protein_coding protein_coding MGP_WSBEiJ_T0060127.1 MGP_WSBEiJ_G0026545.1 mouse_genomes_project 3 73912597 74044424 - MGP_WSBEiJ_P0060127 Zbbx protein_coding protein_coding MGP_WSBEiJ_T0060128.1 MGP_WSBEiJ_G0026545.1 mouse_genomes_project 3 73932101 74021799 - MGP_WSBEiJ_P0060128 Zbbx protein_coding protein_coding MGP_WSBEiJ_T0060129.1 MGP_WSBEiJ_G0026545.1 mouse_genomes_project 3 73952078 74021868 - MGP_WSBEiJ_P0060129 Zbbx protein_coding protein_coding MGP_WSBEiJ_T0060130.1 MGP_WSBEiJ_G0026545.1 mouse_genomes_project 3 73989513 74044418 - MGP_WSBEiJ_P0060130 Zbbx protein_coding protein_coding MGP_WSBEiJ_T0010332.1 MGP_WSBEiJ_G0008489.1 mouse_genomes_project 3 25702422 25702502 + Mir466q miRNA miRNA MGP_WSBEiJ_T0061355.1 MGP_WSBEiJ_G0026827.1 mouse_genomes_project 3 95635546 95647260 - MGP_WSBEiJ_P0061355 Adamtsl4 protein_coding protein_coding MGP_WSBEiJ_T0061356.1 MGP_WSBEiJ_G0026827.1 mouse_genomes_project 3 95635549 95647201 - MGP_WSBEiJ_P0061356 Adamtsl4 protein_coding protein_coding MGP_WSBEiJ_T0061357.1 MGP_WSBEiJ_G0026827.1 mouse_genomes_project 3 95636095 95636497 - Adamtsl4 protein_coding processed_transcript MGP_WSBEiJ_T0061358.1 MGP_WSBEiJ_G0026827.1 mouse_genomes_project 3 95638366 95639439 - Adamtsl4 protein_coding processed_transcript MGP_WSBEiJ_T0061359.1 MGP_WSBEiJ_G0026827.1 mouse_genomes_project 3 95643977 95647208 - MGP_WSBEiJ_P0061359 Adamtsl4 protein_coding protein_coding MGP_WSBEiJ_T0059647.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49242048 49338231 - MGP_WSBEiJ_P0059647 Elf2 protein_coding protein_coding MGP_WSBEiJ_T0059648.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49244565 49319972 - MGP_WSBEiJ_P0059648 Elf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059649.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49244566 49338212 - MGP_WSBEiJ_P0059649 Elf2 protein_coding protein_coding MGP_WSBEiJ_T0059650.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49244998 49268322 - MGP_WSBEiJ_P0059650 Elf2 protein_coding protein_coding MGP_WSBEiJ_T0059651.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49245000 49268421 - MGP_WSBEiJ_P0059651 Elf2 protein_coding protein_coding MGP_WSBEiJ_T0059652.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49245000 49268482 - MGP_WSBEiJ_P0059652 Elf2 protein_coding protein_coding MGP_WSBEiJ_T0059653.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49245020 49319930 - MGP_WSBEiJ_P0059653 Elf2 protein_coding protein_coding MGP_WSBEiJ_T0059654.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49248018 49249574 - Elf2 protein_coding retained_intron MGP_WSBEiJ_T0059655.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49254173 49338226 - MGP_WSBEiJ_P0059655 Elf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059656.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49254173 49268275 - MGP_WSBEiJ_P0059656 Elf2 protein_coding protein_coding MGP_WSBEiJ_T0059657.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49254189 49338129 - Elf2 protein_coding processed_transcript MGP_WSBEiJ_T0059658.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49254189 49268331 - MGP_WSBEiJ_P0059658 Elf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059659.1 MGP_WSBEiJ_G0026436.1 mouse_genomes_project 3 49254353 49268351 - MGP_WSBEiJ_P0059659 Elf2 protein_coding protein_coding MGP_WSBEiJ_T0013533.1 MGP_WSBEiJ_G0011663.1 mouse_genomes_project 3 5416363 5417593 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059790.1 MGP_WSBEiJ_G0026463.1 mouse_genomes_project 3 53313854 53350300 + MGP_WSBEiJ_P0059790 Ccdc169 protein_coding protein_coding MGP_WSBEiJ_T0059791.1 MGP_WSBEiJ_G0026463.1 mouse_genomes_project 3 53316554 53347713 + MGP_WSBEiJ_P0059791 Ccdc169 protein_coding protein_coding MGP_WSBEiJ_T0059792.1 MGP_WSBEiJ_G0026463.1 mouse_genomes_project 3 53316554 53346661 + MGP_WSBEiJ_P0059792 Ccdc169 protein_coding protein_coding MGP_WSBEiJ_T0059793.1 MGP_WSBEiJ_G0026463.1 mouse_genomes_project 3 53316571 53333531 + MGP_WSBEiJ_P0059793 Ccdc169 protein_coding protein_coding MGP_WSBEiJ_T0059794.1 MGP_WSBEiJ_G0026463.1 mouse_genomes_project 3 53318731 53347767 + MGP_WSBEiJ_P0059794 Ccdc169 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059795.1 MGP_WSBEiJ_G0026463.1 mouse_genomes_project 3 53318731 53347767 + MGP_WSBEiJ_P0059795 Ccdc169 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011351.1 MGP_WSBEiJ_G0009508.1 mouse_genomes_project 3 126367521 126367819 + Gm23673 misc_RNA misc_RNA MGP_WSBEiJ_T0004335.1 MGP_WSBEiJ_G0003781.1 mouse_genomes_project 3 160963993 160965874 + 1810013D15Rik antisense antisense MGP_WSBEiJ_T0004336.1 MGP_WSBEiJ_G0003781.1 mouse_genomes_project 3 160963995 160965606 + 1810013D15Rik antisense antisense MGP_WSBEiJ_T0004337.1 MGP_WSBEiJ_G0003781.1 mouse_genomes_project 3 160964484 160976899 + 1810013D15Rik antisense antisense MGP_WSBEiJ_T0060808.1 MGP_WSBEiJ_G0026681.1 mouse_genomes_project 3 88909203 88912101 - MGP_WSBEiJ_P0060808 Cks1b protein_coding protein_coding MGP_WSBEiJ_T0060809.1 MGP_WSBEiJ_G0026681.1 mouse_genomes_project 3 88909288 88911735 - MGP_WSBEiJ_P0060809 Cks1b protein_coding protein_coding MGP_WSBEiJ_T0060810.1 MGP_WSBEiJ_G0026681.1 mouse_genomes_project 3 88909575 88911937 - MGP_WSBEiJ_P0060810 Cks1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013670.1 MGP_WSBEiJ_G0011800.1 mouse_genomes_project 3 48606982 48607358 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063365.1 MGP_WSBEiJ_G0027242.1 mouse_genomes_project 3 158043526 158052715 + Lrriq3 protein_coding retained_intron MGP_WSBEiJ_T0063366.1 MGP_WSBEiJ_G0027242.1 mouse_genomes_project 3 158043526 158153124 + MGP_WSBEiJ_P0063366 Lrriq3 protein_coding protein_coding MGP_WSBEiJ_T0063367.1 MGP_WSBEiJ_G0027242.1 mouse_genomes_project 3 158043630 158141087 + MGP_WSBEiJ_P0063367 Lrriq3 protein_coding protein_coding MGP_WSBEiJ_T0063368.1 MGP_WSBEiJ_G0027242.1 mouse_genomes_project 3 158043680 158095041 + MGP_WSBEiJ_P0063368 Lrriq3 protein_coding protein_coding MGP_WSBEiJ_T0007567.1 MGP_WSBEiJ_G0006192.1 mouse_genomes_project 3 123113744 123114561 - Gm43607 lincRNA lincRNA MGP_WSBEiJ_T0013834.1 MGP_WSBEiJ_G0011964.1 mouse_genomes_project 3 102537661 102538346 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062204.1 MGP_WSBEiJ_G0027031.1 mouse_genomes_project 3 109954208 109991228 + MGP_WSBEiJ_P0062204 Slc25a24 protein_coding protein_coding MGP_WSBEiJ_T0062205.1 MGP_WSBEiJ_G0027031.1 mouse_genomes_project 3 109954221 109981268 + MGP_WSBEiJ_P0062205 Slc25a24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062499.1 MGP_WSBEiJ_G0027089.1 mouse_genomes_project 3 125911484 125936501 - MGP_WSBEiJ_P0062499 1700006A11Rik protein_coding protein_coding MGP_WSBEiJ_T0062500.1 MGP_WSBEiJ_G0027089.1 mouse_genomes_project 3 125911719 125936452 - MGP_WSBEiJ_P0062500 1700006A11Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004227.1 MGP_WSBEiJ_G0003710.1 mouse_genomes_project 3 96607379 96609379 - Gm15441 antisense antisense MGP_WSBEiJ_T0004228.1 MGP_WSBEiJ_G0003710.1 mouse_genomes_project 3 96607402 96618376 - Gm15441 antisense antisense MGP_WSBEiJ_T0007413.1 MGP_WSBEiJ_G0006076.1 mouse_genomes_project 3 39180024 39187175 - Gm43733 lincRNA lincRNA MGP_WSBEiJ_T0007414.1 MGP_WSBEiJ_G0006076.1 mouse_genomes_project 3 39180989 39187203 - Gm43733 lincRNA lincRNA MGP_WSBEiJ_T0007415.1 MGP_WSBEiJ_G0006076.1 mouse_genomes_project 3 39181072 39182002 - Gm43733 lincRNA lincRNA MGP_WSBEiJ_T0004234.1 MGP_WSBEiJ_G0003715.1 mouse_genomes_project 3 100463448 100470449 - Spag17os antisense antisense MGP_WSBEiJ_T0004235.1 MGP_WSBEiJ_G0003715.1 mouse_genomes_project 3 100465423 100470449 - Spag17os antisense antisense MGP_WSBEiJ_T0059566.1 MGP_WSBEiJ_G0026424.1 mouse_genomes_project 3 38476063 38579249 + MGP_WSBEiJ_P0059566 Abhd18 protein_coding protein_coding MGP_WSBEiJ_T0059568.1 MGP_WSBEiJ_G0026424.1 mouse_genomes_project 3 38513986 38581084 + MGP_WSBEiJ_P0059568 Abhd18 protein_coding protein_coding MGP_WSBEiJ_T0059569.1 MGP_WSBEiJ_G0026424.1 mouse_genomes_project 3 38514118 38581082 + MGP_WSBEiJ_P0059569 Abhd18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059570.1 MGP_WSBEiJ_G0026424.1 mouse_genomes_project 3 38514147 38566366 + MGP_WSBEiJ_P0059570 Abhd18 protein_coding protein_coding MGP_WSBEiJ_T0059571.1 MGP_WSBEiJ_G0026424.1 mouse_genomes_project 3 38514163 38580079 + MGP_WSBEiJ_P0059571 Abhd18 protein_coding protein_coding MGP_WSBEiJ_T0059572.1 MGP_WSBEiJ_G0026424.1 mouse_genomes_project 3 38514165 38580096 + MGP_WSBEiJ_P0059572 Abhd18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059574.1 MGP_WSBEiJ_G0026424.1 mouse_genomes_project 3 38573482 38579637 + Abhd18 protein_coding processed_transcript MGP_WSBEiJ_T0013881.1 MGP_WSBEiJ_G0012011.1 mouse_genomes_project 3 117681540 117681982 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001172.1 MGP_WSBEiJ_G0001102.1 mouse_genomes_project 3 50082550 50089514 - TEC TEC MGP_WSBEiJ_T0001092.1 MGP_WSBEiJ_G0001024.1 mouse_genomes_project 3 26535480 26536821 + TEC TEC MGP_WSBEiJ_T0010392.1 MGP_WSBEiJ_G0008549.1 mouse_genomes_project 3 148942110 148942196 - Gm22901 miRNA miRNA MGP_WSBEiJ_T0061492.1 MGP_WSBEiJ_G0026862.1 mouse_genomes_project 3 96693002 96702992 + Pex11b protein_coding processed_transcript MGP_WSBEiJ_T0061493.1 MGP_WSBEiJ_G0026862.1 mouse_genomes_project 3 96693056 96702992 + MGP_WSBEiJ_P0061493 Pex11b protein_coding protein_coding MGP_WSBEiJ_T0061495.1 MGP_WSBEiJ_G0026862.1 mouse_genomes_project 3 96693126 96701659 + MGP_WSBEiJ_P0061495 Pex11b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061496.1 MGP_WSBEiJ_G0026862.1 mouse_genomes_project 3 96693279 96694580 + Pex11b protein_coding retained_intron MGP_WSBEiJ_T0061497.1 MGP_WSBEiJ_G0026862.1 mouse_genomes_project 3 96693298 96702352 + MGP_WSBEiJ_P0061497 Pex11b protein_coding protein_coding MGP_WSBEiJ_T0061498.1 MGP_WSBEiJ_G0026862.1 mouse_genomes_project 3 96693459 96702352 + MGP_WSBEiJ_P0061498 Pex11b protein_coding protein_coding MGP_WSBEiJ_T0061499.1 MGP_WSBEiJ_G0026862.1 mouse_genomes_project 3 96694679 96701426 + Pex11b protein_coding retained_intron MGP_WSBEiJ_T0001229.1 MGP_WSBEiJ_G0001159.1 mouse_genomes_project 3 93085876 93088410 + TEC TEC MGP_WSBEiJ_T0098150.1 MGP_WSBEiJ_G0036813.1 mouse_genomes_project 3 30500319 30500476 + Gm23214 snRNA snRNA MGP_WSBEiJ_T0098174.1 MGP_WSBEiJ_G0036837.1 mouse_genomes_project 3 78888001 78888104 + Gm26420 snRNA snRNA MGP_WSBEiJ_T0013638.1 MGP_WSBEiJ_G0011768.1 mouse_genomes_project 3 40938987 40939445 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059483.1 MGP_WSBEiJ_G0026407.1 mouse_genomes_project 3 34722656 34774666 + MGP_WSBEiJ_P0059483 Adad1 protein_coding protein_coding MGP_WSBEiJ_T0059484.1 MGP_WSBEiJ_G0026407.1 mouse_genomes_project 3 34722760 34773664 + MGP_WSBEiJ_P0059484 Adad1 protein_coding protein_coding MGP_WSBEiJ_T0059485.1 MGP_WSBEiJ_G0026407.1 mouse_genomes_project 3 34722807 34726531 + Adad1 protein_coding retained_intron MGP_WSBEiJ_T0059486.1 MGP_WSBEiJ_G0026407.1 mouse_genomes_project 3 34748085 34758186 + Adad1 protein_coding retained_intron MGP_WSBEiJ_T0059487.1 MGP_WSBEiJ_G0026407.1 mouse_genomes_project 3 34748222 34786870 + MGP_WSBEiJ_P0059487 Adad1 protein_coding protein_coding MGP_WSBEiJ_T0061172.1 MGP_WSBEiJ_G0026796.1 mouse_genomes_project 3 94821455 94847586 + protein_coding retained_intron MGP_WSBEiJ_T0061173.1 MGP_WSBEiJ_G0026796.1 mouse_genomes_project 3 94821457 94846192 + MGP_WSBEiJ_P0061173 protein_coding protein_coding MGP_WSBEiJ_T0061174.1 MGP_WSBEiJ_G0026796.1 mouse_genomes_project 3 94821536 94847985 + MGP_WSBEiJ_P0061174 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061175.1 MGP_WSBEiJ_G0026796.1 mouse_genomes_project 3 94821548 94846199 + MGP_WSBEiJ_P0061175 protein_coding protein_coding MGP_WSBEiJ_T0061176.1 MGP_WSBEiJ_G0026796.1 mouse_genomes_project 3 94821548 94845578 + MGP_WSBEiJ_P0061176 protein_coding unknown_likely_coding MGP_WSBEiJ_T0001147.1 MGP_WSBEiJ_G0001079.1 mouse_genomes_project 3 48691916 48697752 - TEC TEC MGP_WSBEiJ_T0007551.1 MGP_WSBEiJ_G0006181.1 mouse_genomes_project 3 117283386 117300109 + Gm26544 lincRNA lincRNA MGP_WSBEiJ_T0058917.1 MGP_WSBEiJ_G0026289.1 mouse_genomes_project 3 2326741 2343363 - MGP_WSBEiJ_P0058917 Pex2 protein_coding protein_coding MGP_WSBEiJ_T0058918.1 MGP_WSBEiJ_G0026289.1 mouse_genomes_project 3 2326741 2343363 - MGP_WSBEiJ_P0058918 Pex2 protein_coding protein_coding MGP_WSBEiJ_T0058919.1 MGP_WSBEiJ_G0026289.1 mouse_genomes_project 3 2327050 2330283 - MGP_WSBEiJ_P0058919 Pex2 protein_coding protein_coding MGP_WSBEiJ_T0058920.1 MGP_WSBEiJ_G0026289.1 mouse_genomes_project 3 2327053 2343358 - MGP_WSBEiJ_P0058920 Pex2 protein_coding protein_coding MGP_WSBEiJ_T0058921.1 MGP_WSBEiJ_G0026289.1 mouse_genomes_project 3 2327053 2343452 - MGP_WSBEiJ_P0058921 Pex2 protein_coding protein_coding MGP_WSBEiJ_T0058922.1 MGP_WSBEiJ_G0026289.1 mouse_genomes_project 3 2327057 2343341 - MGP_WSBEiJ_P0058922 Pex2 protein_coding protein_coding MGP_WSBEiJ_T0061924.1 MGP_WSBEiJ_G0026962.1 mouse_genomes_project 3 106585037 106602576 - MGP_WSBEiJ_P0061924 Atp5f1 protein_coding protein_coding MGP_WSBEiJ_T0061925.1 MGP_WSBEiJ_G0026962.1 mouse_genomes_project 3 106585041 106601753 - MGP_WSBEiJ_P0061925 Atp5f1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061926.1 MGP_WSBEiJ_G0026962.1 mouse_genomes_project 3 106585237 106596638 - MGP_WSBEiJ_P0061926 Atp5f1 protein_coding protein_coding MGP_WSBEiJ_T0061927.1 MGP_WSBEiJ_G0026962.1 mouse_genomes_project 3 106596126 106601741 - Atp5f1 protein_coding retained_intron MGP_WSBEiJ_T0061928.1 MGP_WSBEiJ_G0026962.1 mouse_genomes_project 3 106596283 106598494 - Atp5f1 protein_coding retained_intron MGP_WSBEiJ_T0061929.1 MGP_WSBEiJ_G0026962.1 mouse_genomes_project 3 106601067 106601723 - Atp5f1 protein_coding retained_intron MGP_WSBEiJ_T0013640.1 MGP_WSBEiJ_G0011770.1 mouse_genomes_project 3 41064444 41065608 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013916.1 MGP_WSBEiJ_G0012046.1 mouse_genomes_project 3 131931536 131932129 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099428.1 MGP_WSBEiJ_G0038091.1 mouse_genomes_project 3 44105707 44105839 + Gm26081 snoRNA snoRNA MGP_WSBEiJ_T0061753.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552161 103561788 + MGP_WSBEiJ_P0061753 Nras protein_coding protein_coding MGP_WSBEiJ_T0061754.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552224 103556410 + MGP_WSBEiJ_P0061754 Nras protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061755.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552243 103558263 + MGP_WSBEiJ_P0061755 Nras protein_coding protein_coding MGP_WSBEiJ_T0061756.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552470 103554189 + MGP_WSBEiJ_P0061756 Nras protein_coding protein_coding MGP_WSBEiJ_T0061757.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552472 103557293 + MGP_WSBEiJ_P0061757 Nras protein_coding protein_coding MGP_WSBEiJ_T0061758.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552619 103556409 + MGP_WSBEiJ_P0061758 Nras protein_coding protein_coding MGP_WSBEiJ_T0061759.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552779 103560357 + MGP_WSBEiJ_P0061759 Nras protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061760.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552779 103561780 + MGP_WSBEiJ_P0061760 Nras protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061761.1 MGP_WSBEiJ_G0026926.1 mouse_genomes_project 3 103552864 103556845 + Nras protein_coding retained_intron MGP_WSBEiJ_T0060656.1 MGP_WSBEiJ_G0026656.1 mouse_genomes_project 3 88548013 88566959 - MGP_WSBEiJ_P0060656 Gm43738 protein_coding protein_coding MGP_WSBEiJ_T0062024.1 MGP_WSBEiJ_G0026992.1 mouse_genomes_project 3 108404460 108419107 - MGP_WSBEiJ_P0062024 Ahcyl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062025.1 MGP_WSBEiJ_G0026992.1 mouse_genomes_project 3 108404462 108437897 - MGP_WSBEiJ_P0062025 Ahcyl1 protein_coding protein_coding MGP_WSBEiJ_T0062026.1 MGP_WSBEiJ_G0026992.1 mouse_genomes_project 3 108405295 108406937 - Ahcyl1 protein_coding processed_transcript MGP_WSBEiJ_T0062027.1 MGP_WSBEiJ_G0026992.1 mouse_genomes_project 3 108405825 108411913 - Ahcyl1 protein_coding retained_intron MGP_WSBEiJ_T0062028.1 MGP_WSBEiJ_G0026992.1 mouse_genomes_project 3 108406732 108408824 - Ahcyl1 protein_coding retained_intron MGP_WSBEiJ_T0062029.1 MGP_WSBEiJ_G0026992.1 mouse_genomes_project 3 108409590 108410850 - Ahcyl1 protein_coding retained_intron MGP_WSBEiJ_T0062030.1 MGP_WSBEiJ_G0026992.1 mouse_genomes_project 3 108412486 108437300 - MGP_WSBEiJ_P0062030 Ahcyl1 protein_coding protein_coding MGP_WSBEiJ_T0062031.1 MGP_WSBEiJ_G0026992.1 mouse_genomes_project 3 108413074 108437842 - Ahcyl1 protein_coding retained_intron MGP_WSBEiJ_T0061583.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97834058 97874186 - MGP_WSBEiJ_P0061583 Pde4dip protein_coding unknown_likely_coding MGP_WSBEiJ_T0061584.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97834060 98047923 - MGP_WSBEiJ_P0061584 Pde4dip protein_coding protein_coding MGP_WSBEiJ_T0061585.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97834066 97839272 - Pde4dip protein_coding processed_transcript MGP_WSBEiJ_T0061586.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97834101 98047923 - MGP_WSBEiJ_P0061586 Pde4dip protein_coding protein_coding MGP_WSBEiJ_T0061587.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97839229 97841514 - Pde4dip protein_coding processed_transcript MGP_WSBEiJ_T0061588.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97888738 97917776 - MGP_WSBEiJ_P0061588 Pde4dip protein_coding protein_coding MGP_WSBEiJ_T0061589.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97890701 97917698 - MGP_WSBEiJ_P0061589 Pde4dip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061590.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97896465 98024676 - MGP_WSBEiJ_P0061590 Pde4dip protein_coding protein_coding MGP_WSBEiJ_T0061591.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97948034 97977655 - MGP_WSBEiJ_P0061591 Pde4dip protein_coding protein_coding MGP_WSBEiJ_T0061592.1 MGP_WSBEiJ_G0026882.1 mouse_genomes_project 3 97973999 98024625 - Pde4dip protein_coding retained_intron MGP_WSBEiJ_T0060505.1 MGP_WSBEiJ_G0026632.1 mouse_genomes_project 3 87698163 87703863 - MGP_WSBEiJ_P0060505 Tmem79 protein_coding protein_coding MGP_WSBEiJ_T0060506.1 MGP_WSBEiJ_G0026632.1 mouse_genomes_project 3 87698554 87703627 - MGP_WSBEiJ_P0060506 Tmem79 protein_coding protein_coding MGP_WSBEiJ_T0060507.1 MGP_WSBEiJ_G0026632.1 mouse_genomes_project 3 87698555 87703813 - MGP_WSBEiJ_P0060507 Tmem79 protein_coding protein_coding MGP_WSBEiJ_T0060508.1 MGP_WSBEiJ_G0026632.1 mouse_genomes_project 3 87702496 87705490 - MGP_WSBEiJ_P0060508 Tmem79 protein_coding protein_coding MGP_WSBEiJ_T0013973.1 MGP_WSBEiJ_G0012103.1 mouse_genomes_project 3 151296916 151297431 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059242.1 MGP_WSBEiJ_G0026369.1 mouse_genomes_project 3 28196008 28225415 + MGP_WSBEiJ_P0059242 Sec62 protein_coding protein_coding MGP_WSBEiJ_T0059243.1 MGP_WSBEiJ_G0026369.1 mouse_genomes_project 3 28196469 28204652 + Sec62 protein_coding retained_intron MGP_WSBEiJ_T0059244.1 MGP_WSBEiJ_G0026369.1 mouse_genomes_project 3 28223002 28224184 + Sec62 protein_coding processed_transcript MGP_WSBEiJ_T0001227.1 MGP_WSBEiJ_G0001157.1 mouse_genomes_project 3 89896282 89901782 + TEC TEC MGP_WSBEiJ_T0100789.1 MGP_WSBEiJ_G0039247.1 mouse_genomes_project 3 98947537 98973398 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099423.1 MGP_WSBEiJ_G0038086.1 mouse_genomes_project 3 31447870 31448002 - Gm23175 snoRNA snoRNA MGP_WSBEiJ_T0059151.1 MGP_WSBEiJ_G0026353.1 mouse_genomes_project 3 24626417 24947028 - MGP_WSBEiJ_P0059151 Fndc3b protein_coding protein_coding MGP_WSBEiJ_T0059152.1 MGP_WSBEiJ_G0026353.1 mouse_genomes_project 3 24626417 24947069 - MGP_WSBEiJ_P0059152 Fndc3b protein_coding protein_coding MGP_WSBEiJ_T0059153.1 MGP_WSBEiJ_G0026353.1 mouse_genomes_project 3 24713013 24947937 - Fndc3b protein_coding retained_intron MGP_WSBEiJ_T0059154.1 MGP_WSBEiJ_G0026353.1 mouse_genomes_project 3 24720016 24947869 - MGP_WSBEiJ_P0059154 Fndc3b protein_coding protein_coding MGP_WSBEiJ_T0001196.1 MGP_WSBEiJ_G0001126.1 mouse_genomes_project 3 57930860 57933283 + TEC TEC MGP_WSBEiJ_T0061647.1 MGP_WSBEiJ_G0026903.1 mouse_genomes_project 3 100523081 100567252 + MGP_WSBEiJ_P0061647 Gdap2 protein_coding protein_coding MGP_WSBEiJ_T0061648.1 MGP_WSBEiJ_G0026903.1 mouse_genomes_project 3 100523218 100562738 + MGP_WSBEiJ_P0061648 Gdap2 protein_coding protein_coding MGP_WSBEiJ_T0061649.1 MGP_WSBEiJ_G0026903.1 mouse_genomes_project 3 100523244 100530649 + Gdap2 protein_coding processed_transcript MGP_WSBEiJ_T0061650.1 MGP_WSBEiJ_G0026903.1 mouse_genomes_project 3 100554854 100566926 + MGP_WSBEiJ_P0061650 Gdap2 protein_coding protein_coding MGP_WSBEiJ_T0061651.1 MGP_WSBEiJ_G0026903.1 mouse_genomes_project 3 100560955 100562738 + Gdap2 protein_coding retained_intron MGP_WSBEiJ_T0010336.1 MGP_WSBEiJ_G0008493.1 mouse_genomes_project 3 30744888 30744993 - Gm27974 miRNA miRNA MGP_WSBEiJ_T0060953.1 MGP_WSBEiJ_G0026705.1 mouse_genomes_project 3 89975474 89980174 - Slc27a3 protein_coding retained_intron MGP_WSBEiJ_T0060954.1 MGP_WSBEiJ_G0026705.1 mouse_genomes_project 3 89975474 89980163 - MGP_WSBEiJ_P0060954 Slc27a3 protein_coding protein_coding MGP_WSBEiJ_T0060955.1 MGP_WSBEiJ_G0026705.1 mouse_genomes_project 3 89975476 89979900 - MGP_WSBEiJ_P0060955 Slc27a3 protein_coding protein_coding MGP_WSBEiJ_T0060956.1 MGP_WSBEiJ_G0026705.1 mouse_genomes_project 3 89977670 89979217 - Slc27a3 protein_coding retained_intron MGP_WSBEiJ_T0060957.1 MGP_WSBEiJ_G0026705.1 mouse_genomes_project 3 89978598 89979866 - Slc27a3 protein_coding processed_transcript MGP_WSBEiJ_T0013784.1 MGP_WSBEiJ_G0011914.1 mouse_genomes_project 3 89343917 89344443 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099459.1 MGP_WSBEiJ_G0038122.1 mouse_genomes_project 3 99430187 99430316 - Gm22341 snoRNA snoRNA MGP_WSBEiJ_T0097342.1 MGP_WSBEiJ_G0036016.1 mouse_genomes_project 3 101484870 101488243 - Gm43465 sense_intronic sense_intronic MGP_WSBEiJ_T0007546.1 MGP_WSBEiJ_G0006177.1 mouse_genomes_project 3 109146850 109147552 + Gm12525 lincRNA lincRNA MGP_WSBEiJ_T0061566.1 MGP_WSBEiJ_G0026877.1 mouse_genomes_project 3 97522123 97542251 - MGP_WSBEiJ_P0061566 Olfr1402 protein_coding protein_coding MGP_WSBEiJ_T0061988.1 MGP_WSBEiJ_G0026977.1 mouse_genomes_project 3 107748176 107750078 + MGP_WSBEiJ_P0061988 Kcna3 protein_coding protein_coding MGP_WSBEiJ_T0001087.1 MGP_WSBEiJ_G0001019.1 mouse_genomes_project 3 19897333 19897584 + TEC TEC MGP_WSBEiJ_T0004195.1 MGP_WSBEiJ_G0003688.1 mouse_genomes_project 3 88080208 88083046 - antisense antisense MGP_WSBEiJ_T0013619.1 MGP_WSBEiJ_G0011749.1 mouse_genomes_project 3 34462811 34463418 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007337.1 MGP_WSBEiJ_G0006020.1 mouse_genomes_project 3 6243286 6272803 + C030034L19Rik lincRNA lincRNA MGP_WSBEiJ_T0007338.1 MGP_WSBEiJ_G0006020.1 mouse_genomes_project 3 6243290 6273718 + C030034L19Rik lincRNA lincRNA MGP_WSBEiJ_T0007339.1 MGP_WSBEiJ_G0006020.1 mouse_genomes_project 3 6243302 6254116 + C030034L19Rik lincRNA lincRNA MGP_WSBEiJ_T0013863.1 MGP_WSBEiJ_G0011993.1 mouse_genomes_project 3 111431297 111431632 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062320.1 MGP_WSBEiJ_G0027055.1 mouse_genomes_project 3 117895885 117975223 - MGP_WSBEiJ_P0062320 Agl protein_coding protein_coding MGP_WSBEiJ_T0062321.1 MGP_WSBEiJ_G0027055.1 mouse_genomes_project 3 117902513 117974477 - MGP_WSBEiJ_P0062321 Agl protein_coding protein_coding MGP_WSBEiJ_T0062322.1 MGP_WSBEiJ_G0027055.1 mouse_genomes_project 3 117903057 117943855 - MGP_WSBEiJ_P0062322 Agl protein_coding protein_coding MGP_WSBEiJ_T0062323.1 MGP_WSBEiJ_G0027055.1 mouse_genomes_project 3 117908069 117975099 - MGP_WSBEiJ_P0062323 Agl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062324.1 MGP_WSBEiJ_G0027055.1 mouse_genomes_project 3 117915720 117975186 - MGP_WSBEiJ_P0062324 Agl protein_coding protein_coding MGP_WSBEiJ_T0062325.1 MGP_WSBEiJ_G0027055.1 mouse_genomes_project 3 117942617 117944355 - MGP_WSBEiJ_P0062325 Agl protein_coding protein_coding MGP_WSBEiJ_T0062326.1 MGP_WSBEiJ_G0027055.1 mouse_genomes_project 3 117954365 117975088 - Agl protein_coding retained_intron MGP_WSBEiJ_T0062327.1 MGP_WSBEiJ_G0027055.1 mouse_genomes_project 3 117955701 117974908 - MGP_WSBEiJ_P0062327 Agl protein_coding protein_coding MGP_WSBEiJ_T0013521.1 MGP_WSBEiJ_G0011651.1 mouse_genomes_project 3 1622529 1623495 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007529.1 MGP_WSBEiJ_G0006163.1 mouse_genomes_project 3 103075406 103077627 + Gm42678 lincRNA lincRNA MGP_WSBEiJ_T0061083.1 MGP_WSBEiJ_G0026774.1 mouse_genomes_project 3 93056261 93064657 + Flg protein_coding TEC MGP_WSBEiJ_T0061084.1 MGP_WSBEiJ_G0026774.1 mouse_genomes_project 3 93056279 93066924 + MGP_WSBEiJ_P0061084 Flg protein_coding protein_coding MGP_WSBEiJ_T0061085.1 MGP_WSBEiJ_G0026774.1 mouse_genomes_project 3 93064179 93066924 + MGP_WSBEiJ_P0061085 Flg protein_coding protein_coding MGP_WSBEiJ_T0098203.1 MGP_WSBEiJ_G0036866.1 mouse_genomes_project 3 104654064 104654166 + Gm23830 snRNA snRNA MGP_WSBEiJ_T0013956.1 MGP_WSBEiJ_G0012086.1 mouse_genomes_project 3 143025274 143025638 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001158.1 MGP_WSBEiJ_G0001090.1 mouse_genomes_project 3 49599735 49600277 + TEC TEC MGP_WSBEiJ_T0017357.1 MGP_WSBEiJ_G0014923.1 mouse_genomes_project 3 38510790 38514035 - processed_transcript retained_intron MGP_WSBEiJ_T0100766.1 MGP_WSBEiJ_G0039224.1 mouse_genomes_project 3 78081719 78082249 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0063086.1 MGP_WSBEiJ_G0027198.1 mouse_genomes_project 3 148451773 148458597 + MGP_WSBEiJ_P0063086 2410004B18Rik protein_coding protein_coding MGP_WSBEiJ_T0063087.1 MGP_WSBEiJ_G0027198.1 mouse_genomes_project 3 148451801 148458595 + MGP_WSBEiJ_P0063087 2410004B18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063088.1 MGP_WSBEiJ_G0027198.1 mouse_genomes_project 3 148451949 148457578 + MGP_WSBEiJ_P0063088 2410004B18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063089.1 MGP_WSBEiJ_G0027198.1 mouse_genomes_project 3 148451995 148452555 + 2410004B18Rik protein_coding retained_intron MGP_WSBEiJ_T0063090.1 MGP_WSBEiJ_G0027198.1 mouse_genomes_project 3 148452044 148458010 + MGP_WSBEiJ_P0063090 2410004B18Rik protein_coding protein_coding MGP_WSBEiJ_T0063091.1 MGP_WSBEiJ_G0027198.1 mouse_genomes_project 3 148452410 148457621 + 2410004B18Rik protein_coding retained_intron MGP_WSBEiJ_T0063092.1 MGP_WSBEiJ_G0027198.1 mouse_genomes_project 3 148452853 148457966 + MGP_WSBEiJ_P0063092 2410004B18Rik protein_coding protein_coding MGP_WSBEiJ_T0013796.1 MGP_WSBEiJ_G0011926.1 mouse_genomes_project 3 92942778 92943469 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061274.1 MGP_WSBEiJ_G0026811.1 mouse_genomes_project 3 95147396 95157854 - MGP_WSBEiJ_P0061274 Mllt11 protein_coding protein_coding MGP_WSBEiJ_T0061275.1 MGP_WSBEiJ_G0026811.1 mouse_genomes_project 3 95148306 95161370 - MGP_WSBEiJ_P0061275 Mllt11 protein_coding protein_coding MGP_WSBEiJ_T0061276.1 MGP_WSBEiJ_G0026811.1 mouse_genomes_project 3 95148316 95161373 - MGP_WSBEiJ_P0061276 Mllt11 protein_coding protein_coding MGP_WSBEiJ_T0061277.1 MGP_WSBEiJ_G0026811.1 mouse_genomes_project 3 95157262 95159642 - Mllt11 protein_coding processed_transcript MGP_WSBEiJ_T0061281.1 MGP_WSBEiJ_G0026811.1 mouse_genomes_project 3 95158222 95159568 - Mllt11 protein_coding processed_transcript MGP_WSBEiJ_T0001278.1 MGP_WSBEiJ_G0001208.1 mouse_genomes_project 3 124693320 124695918 - TEC TEC MGP_WSBEiJ_T0062715.1 MGP_WSBEiJ_G0027124.1 mouse_genomes_project 3 133352973 133432800 + MGP_WSBEiJ_P0062715 Papss1 protein_coding protein_coding MGP_WSBEiJ_T0062716.1 MGP_WSBEiJ_G0027124.1 mouse_genomes_project 3 133353009 133432800 + MGP_WSBEiJ_P0062716 Papss1 protein_coding protein_coding MGP_WSBEiJ_T0062717.1 MGP_WSBEiJ_G0027124.1 mouse_genomes_project 3 133353036 133432799 + MGP_WSBEiJ_P0062717 Papss1 protein_coding protein_coding MGP_WSBEiJ_T0062718.1 MGP_WSBEiJ_G0027124.1 mouse_genomes_project 3 133353070 133432799 + MGP_WSBEiJ_P0062718 Papss1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062719.1 MGP_WSBEiJ_G0027124.1 mouse_genomes_project 3 133353140 133371185 + MGP_WSBEiJ_P0062719 Papss1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001289.1 MGP_WSBEiJ_G0001219.1 mouse_genomes_project 3 128339135 128342722 + TEC TEC MGP_WSBEiJ_T0001112.1 MGP_WSBEiJ_G0001044.1 mouse_genomes_project 3 32193964 32194595 - TEC TEC MGP_WSBEiJ_T0013937.1 MGP_WSBEiJ_G0012067.1 mouse_genomes_project 3 137896436 137896736 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013811.1 MGP_WSBEiJ_G0011941.1 mouse_genomes_project 3 95870713 95874963 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062754.1 MGP_WSBEiJ_G0027133.1 mouse_genomes_project 3 135148541 135217809 + MGP_WSBEiJ_P0062754 Ppa2 protein_coding protein_coding MGP_WSBEiJ_T0062755.1 MGP_WSBEiJ_G0027133.1 mouse_genomes_project 3 135148553 135217966 + MGP_WSBEiJ_P0062755 Ppa2 protein_coding protein_coding MGP_WSBEiJ_T0062756.1 MGP_WSBEiJ_G0027133.1 mouse_genomes_project 3 135148913 135210193 + Ppa2 protein_coding processed_transcript MGP_WSBEiJ_T0062757.1 MGP_WSBEiJ_G0027133.1 mouse_genomes_project 3 135159898 135164998 + Ppa2 protein_coding retained_intron MGP_WSBEiJ_T0062758.1 MGP_WSBEiJ_G0027133.1 mouse_genomes_project 3 135178322 135207707 + Ppa2 protein_coding processed_transcript MGP_WSBEiJ_T0062759.1 MGP_WSBEiJ_G0027133.1 mouse_genomes_project 3 135178495 135217813 + Ppa2 protein_coding retained_intron MGP_WSBEiJ_T0062760.1 MGP_WSBEiJ_G0027133.1 mouse_genomes_project 3 135187447 135217798 + MGP_WSBEiJ_P0062760 Ppa2 protein_coding protein_coding MGP_WSBEiJ_T0062761.1 MGP_WSBEiJ_G0027133.1 mouse_genomes_project 3 135212159 135214193 + Ppa2 protein_coding retained_intron MGP_WSBEiJ_T0013703.1 MGP_WSBEiJ_G0011833.1 mouse_genomes_project 3 59129834 59130403 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062708.1 MGP_WSBEiJ_G0027122.1 mouse_genomes_project 3 133149692 133164109 - MGP_WSBEiJ_P0062708 Cyp2u1 protein_coding protein_coding MGP_WSBEiJ_T0062709.1 MGP_WSBEiJ_G0027122.1 mouse_genomes_project 3 133154146 133164085 - MGP_WSBEiJ_P0062709 Cyp2u1 protein_coding protein_coding MGP_WSBEiJ_T0062710.1 MGP_WSBEiJ_G0027122.1 mouse_genomes_project 3 133155287 133164112 - Cyp2u1 protein_coding processed_transcript MGP_WSBEiJ_T0062428.1 MGP_WSBEiJ_G0027075.1 mouse_genomes_project 3 123712464 123723350 + MGP_WSBEiJ_P0062428 Dnttip2 protein_coding protein_coding MGP_WSBEiJ_T0062429.1 MGP_WSBEiJ_G0027075.1 mouse_genomes_project 3 123712494 123714287 + Dnttip2 protein_coding processed_transcript MGP_WSBEiJ_T0062430.1 MGP_WSBEiJ_G0027075.1 mouse_genomes_project 3 123714093 123723328 + Dnttip2 protein_coding processed_transcript MGP_WSBEiJ_T0062431.1 MGP_WSBEiJ_G0027075.1 mouse_genomes_project 3 123714849 123717690 + Dnttip2 protein_coding retained_intron MGP_WSBEiJ_T0062432.1 MGP_WSBEiJ_G0027075.1 mouse_genomes_project 3 123718653 123723177 + Dnttip2 protein_coding retained_intron MGP_WSBEiJ_T0058979.1 MGP_WSBEiJ_G0026309.1 mouse_genomes_project 3 7258923 7262874 - MGP_WSBEiJ_P0058979 Slc10a5 protein_coding protein_coding MGP_WSBEiJ_T0013846.1 MGP_WSBEiJ_G0011976.1 mouse_genomes_project 3 105218931 105219273 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004333.1 MGP_WSBEiJ_G0003779.1 mouse_genomes_project 3 159933909 159951417 - Gm15577 antisense antisense MGP_WSBEiJ_T0010351.1 MGP_WSBEiJ_G0008508.1 mouse_genomes_project 3 86939204 86939649 + miRNA miRNA MGP_WSBEiJ_T0099488.1 MGP_WSBEiJ_G0038151.1 mouse_genomes_project 3 156828969 156829050 - Gm24494 snoRNA snoRNA MGP_WSBEiJ_T0061441.1 MGP_WSBEiJ_G0026840.1 mouse_genomes_project 3 96098363 96135488 + MGP_WSBEiJ_P0061441 protein_coding protein_coding MGP_WSBEiJ_T0061442.1 MGP_WSBEiJ_G0026840.1 mouse_genomes_project 3 96098363 96138296 + MGP_WSBEiJ_P0061442 protein_coding protein_coding MGP_WSBEiJ_T0061443.1 MGP_WSBEiJ_G0026840.1 mouse_genomes_project 3 96098382 96125074 + protein_coding processed_transcript MGP_WSBEiJ_T0061444.1 MGP_WSBEiJ_G0026840.1 mouse_genomes_project 3 96098384 96135523 + protein_coding processed_transcript MGP_WSBEiJ_T0061445.1 MGP_WSBEiJ_G0026840.1 mouse_genomes_project 3 96125459 96155122 + MGP_WSBEiJ_P0061445 protein_coding unknown_likely_coding MGP_WSBEiJ_T0061446.1 MGP_WSBEiJ_G0026840.1 mouse_genomes_project 3 96144678 96146538 + protein_coding processed_transcript MGP_WSBEiJ_T0060442.1 MGP_WSBEiJ_G0026617.1 mouse_genomes_project 3 87278162 87289435 + MGP_WSBEiJ_P0060442 Isg20l2 protein_coding protein_coding MGP_WSBEiJ_T0098156.1 MGP_WSBEiJ_G0036819.1 mouse_genomes_project 3 46955790 46955955 + Gm23511 snRNA snRNA MGP_WSBEiJ_T0099478.1 MGP_WSBEiJ_G0038141.1 mouse_genomes_project 3 134631908 134632019 - Gm22322 snoRNA snoRNA MGP_WSBEiJ_T0063233.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155092561 155121737 - MGP_WSBEiJ_P0063233 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063234.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155092561 155122288 - MGP_WSBEiJ_P0063234 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063235.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155093762 155111469 - MGP_WSBEiJ_P0063235 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063236.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155093810 155104452 - MGP_WSBEiJ_P0063236 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063237.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155093847 155111469 - MGP_WSBEiJ_P0063237 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063238.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155094448 155101012 - Nexn protein_coding processed_transcript MGP_WSBEiJ_T0063239.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155098924 155100321 - Nexn protein_coding retained_intron MGP_WSBEiJ_T0063240.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155100140 155121738 - MGP_WSBEiJ_P0063240 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063241.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155100196 155111515 - MGP_WSBEiJ_P0063241 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063242.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155104208 155104652 - Nexn protein_coding retained_intron MGP_WSBEiJ_T0063243.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155104219 155121765 - MGP_WSBEiJ_P0063243 Nexn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063244.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155104250 155119476 - MGP_WSBEiJ_P0063244 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063245.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155104268 155117513 - MGP_WSBEiJ_P0063245 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063246.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155104370 155118501 - MGP_WSBEiJ_P0063246 Nexn protein_coding protein_coding MGP_WSBEiJ_T0063247.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155108715 155122320 - Nexn protein_coding retained_intron MGP_WSBEiJ_T0063248.1 MGP_WSBEiJ_G0027223.1 mouse_genomes_project 3 155108928 155109297 - Nexn protein_coding retained_intron MGP_WSBEiJ_T0010334.1 MGP_WSBEiJ_G0008491.1 mouse_genomes_project 3 26980423 26980531 + Mir21b miRNA miRNA MGP_WSBEiJ_T0001177.1 MGP_WSBEiJ_G0001107.1 mouse_genomes_project 3 51168775 51172962 + TEC TEC MGP_WSBEiJ_T0061671.1 MGP_WSBEiJ_G0026909.1 mouse_genomes_project 3 101393065 101429107 - MGP_WSBEiJ_P0061671 Cd101 protein_coding protein_coding MGP_WSBEiJ_T0061672.1 MGP_WSBEiJ_G0026909.1 mouse_genomes_project 3 101393068 101421958 - MGP_WSBEiJ_P0061672 Cd101 protein_coding protein_coding MGP_WSBEiJ_T0062023.1 MGP_WSBEiJ_G0026991.1 mouse_genomes_project 3 108372911 108374650 + MGP_WSBEiJ_P0062023 Gm10961 protein_coding protein_coding MGP_WSBEiJ_T0058930.1 MGP_WSBEiJ_G0026293.1 mouse_genomes_project 3 4344800 4383723 - MGP_WSBEiJ_P0058930 Il7 protein_coding protein_coding MGP_WSBEiJ_T0058931.1 MGP_WSBEiJ_G0026293.1 mouse_genomes_project 3 4344894 4384284 - Il7 protein_coding processed_transcript MGP_WSBEiJ_T0013875.1 MGP_WSBEiJ_G0012005.1 mouse_genomes_project 3 114881616 114883259 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010394.1 MGP_WSBEiJ_G0008551.1 mouse_genomes_project 3 156190241 156190353 + Gm27405 miRNA miRNA MGP_WSBEiJ_T0001146.1 MGP_WSBEiJ_G0001078.1 mouse_genomes_project 3 48636248 48640336 - TEC TEC MGP_WSBEiJ_T0062807.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321156 137348429 + MGP_WSBEiJ_P0062807 Ube2d3 protein_coding protein_coding MGP_WSBEiJ_T0062808.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321322 137348478 + MGP_WSBEiJ_P0062808 Ube2d3 protein_coding protein_coding MGP_WSBEiJ_T0062809.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321535 137324603 + Ube2d3 protein_coding processed_transcript MGP_WSBEiJ_T0062810.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321539 137343008 + MGP_WSBEiJ_P0062810 Ube2d3 protein_coding protein_coding MGP_WSBEiJ_T0062811.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321549 137346224 + MGP_WSBEiJ_P0062811 Ube2d3 protein_coding protein_coding MGP_WSBEiJ_T0062812.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321571 137352034 + MGP_WSBEiJ_P0062812 Ube2d3 protein_coding protein_coding MGP_WSBEiJ_T0062813.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321753 137338251 + MGP_WSBEiJ_P0062813 Ube2d3 protein_coding protein_coding MGP_WSBEiJ_T0062814.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321760 137348489 + MGP_WSBEiJ_P0062814 Ube2d3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062815.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137321870 137341165 + Ube2d3 protein_coding retained_intron MGP_WSBEiJ_T0062816.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137337627 137343052 + Ube2d3 protein_coding retained_intron MGP_WSBEiJ_T0062817.1 MGP_WSBEiJ_G0027142.1 mouse_genomes_project 3 137341649 137343871 + Ube2d3 protein_coding retained_intron MGP_WSBEiJ_T0058992.1 MGP_WSBEiJ_G0026313.1 mouse_genomes_project 3 10897489 11144371 + MGP_WSBEiJ_P0058992 Ralyl protein_coding protein_coding MGP_WSBEiJ_T0058993.1 MGP_WSBEiJ_G0026313.1 mouse_genomes_project 3 10897500 11145227 + MGP_WSBEiJ_P0058993 Ralyl protein_coding protein_coding MGP_WSBEiJ_T0058994.1 MGP_WSBEiJ_G0026313.1 mouse_genomes_project 3 10897507 11145534 + MGP_WSBEiJ_P0058994 Ralyl protein_coding protein_coding MGP_WSBEiJ_T0098166.1 MGP_WSBEiJ_G0036829.1 mouse_genomes_project 3 61916048 61916154 + Gm24946 snRNA snRNA MGP_WSBEiJ_T0061785.1 MGP_WSBEiJ_G0026931.1 mouse_genomes_project 3 104100675 104157551 + MGP_WSBEiJ_P0061785 Syt6 protein_coding protein_coding MGP_WSBEiJ_T0061786.1 MGP_WSBEiJ_G0026931.1 mouse_genomes_project 3 104100725 104161799 + MGP_WSBEiJ_P0061786 Syt6 protein_coding protein_coding MGP_WSBEiJ_T0061787.1 MGP_WSBEiJ_G0026931.1 mouse_genomes_project 3 104100726 104161799 + MGP_WSBEiJ_P0061787 Syt6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061788.1 MGP_WSBEiJ_G0026931.1 mouse_genomes_project 3 104100744 104159389 + MGP_WSBEiJ_P0061788 Syt6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061789.1 MGP_WSBEiJ_G0026931.1 mouse_genomes_project 3 104100822 104157532 + MGP_WSBEiJ_P0061789 Syt6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061790.1 MGP_WSBEiJ_G0026931.1 mouse_genomes_project 3 104103125 104114170 + MGP_WSBEiJ_P0061790 Syt6 protein_coding protein_coding MGP_WSBEiJ_T0061791.1 MGP_WSBEiJ_G0026931.1 mouse_genomes_project 3 104103186 104154172 + MGP_WSBEiJ_P0061791 Syt6 protein_coding protein_coding MGP_WSBEiJ_T0061792.1 MGP_WSBEiJ_G0026931.1 mouse_genomes_project 3 104112359 104161803 + MGP_WSBEiJ_P0061792 Syt6 protein_coding protein_coding MGP_WSBEiJ_T0061011.1 MGP_WSBEiJ_G0026720.1 mouse_genomes_project 3 90228882 90230415 + MGP_WSBEiJ_P0061011 S100a6 protein_coding protein_coding MGP_WSBEiJ_T0061012.1 MGP_WSBEiJ_G0026720.1 mouse_genomes_project 3 90229154 90230008 + S100a6 protein_coding retained_intron MGP_WSBEiJ_T0061013.1 MGP_WSBEiJ_G0026720.1 mouse_genomes_project 3 90229305 90230415 + MGP_WSBEiJ_P0061013 S100a6 protein_coding protein_coding MGP_WSBEiJ_T0061014.1 MGP_WSBEiJ_G0026720.1 mouse_genomes_project 3 90229760 90241624 + MGP_WSBEiJ_P0061014 S100a6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001101.1 MGP_WSBEiJ_G0001033.1 mouse_genomes_project 3 29393823 29397454 + TEC TEC MGP_WSBEiJ_T0007540.1 MGP_WSBEiJ_G0006172.1 mouse_genomes_project 3 107806812 107816123 + A930002I21Rik lincRNA lincRNA MGP_WSBEiJ_T0007541.1 MGP_WSBEiJ_G0006172.1 mouse_genomes_project 3 107806814 107814942 + A930002I21Rik lincRNA lincRNA MGP_WSBEiJ_T0001086.1 MGP_WSBEiJ_G0001018.1 mouse_genomes_project 3 17940324 17944396 + TEC TEC MGP_WSBEiJ_T0061814.1 MGP_WSBEiJ_G0026938.1 mouse_genomes_project 3 104341162 104374096 + MGP_WSBEiJ_P0061814 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059106.1 MGP_WSBEiJ_G0026344.1 mouse_genomes_project 3 17418952 17479203 - MGP_WSBEiJ_P0059106 Agtr1b protein_coding protein_coding MGP_WSBEiJ_T0059107.1 MGP_WSBEiJ_G0026344.1 mouse_genomes_project 3 17419376 17479150 - MGP_WSBEiJ_P0059107 Agtr1b protein_coding protein_coding MGP_WSBEiJ_T0099413.1 MGP_WSBEiJ_G0038076.1 mouse_genomes_project 3 3735941 3736054 + Gm22074 snoRNA snoRNA MGP_WSBEiJ_T0063299.1 MGP_WSBEiJ_G0027232.1 mouse_genomes_project 3 156766323 156823498 - MGP_WSBEiJ_P0063299 Msh4 protein_coding protein_coding MGP_WSBEiJ_T0063300.1 MGP_WSBEiJ_G0027232.1 mouse_genomes_project 3 156766443 156788190 - Msh4 protein_coding retained_intron MGP_WSBEiJ_T0063301.1 MGP_WSBEiJ_G0027232.1 mouse_genomes_project 3 156766443 156794755 - Msh4 protein_coding retained_intron MGP_WSBEiJ_T0063302.1 MGP_WSBEiJ_G0027232.1 mouse_genomes_project 3 156766443 156776614 - Msh4 protein_coding processed_transcript MGP_WSBEiJ_T0063303.1 MGP_WSBEiJ_G0027232.1 mouse_genomes_project 3 156766443 156794755 - Msh4 protein_coding retained_intron MGP_WSBEiJ_T0063304.1 MGP_WSBEiJ_G0027232.1 mouse_genomes_project 3 156766443 156776640 - Msh4 protein_coding retained_intron MGP_WSBEiJ_T0063305.1 MGP_WSBEiJ_G0027232.1 mouse_genomes_project 3 156766443 156822091 - MGP_WSBEiJ_P0063305 Msh4 protein_coding protein_coding MGP_WSBEiJ_T0063306.1 MGP_WSBEiJ_G0027232.1 mouse_genomes_project 3 156766447 156822251 - MGP_WSBEiJ_P0063306 Msh4 protein_coding protein_coding MGP_WSBEiJ_T0013650.1 MGP_WSBEiJ_G0011780.1 mouse_genomes_project 3 44917127 44918527 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013789.1 MGP_WSBEiJ_G0011919.1 mouse_genomes_project 3 91733605 91733943 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013947.1 MGP_WSBEiJ_G0012077.1 mouse_genomes_project 3 140687829 140688496 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063093.1 MGP_WSBEiJ_G0027199.1 mouse_genomes_project 3 148505612 148540557 + MGP_WSBEiJ_P0063093 Syde2 protein_coding protein_coding MGP_WSBEiJ_T0063094.1 MGP_WSBEiJ_G0027199.1 mouse_genomes_project 3 148512554 148517300 + Syde2 protein_coding processed_transcript MGP_WSBEiJ_T0004231.1 MGP_WSBEiJ_G0003713.1 mouse_genomes_project 3 97880239 97886044 + Gm43076 antisense antisense MGP_WSBEiJ_T0004232.1 MGP_WSBEiJ_G0003713.1 mouse_genomes_project 3 97880429 97882954 + Gm43076 antisense antisense MGP_WSBEiJ_T0063048.1 MGP_WSBEiJ_G0027191.1 mouse_genomes_project 3 147526588 147556671 - MGP_WSBEiJ_P0063048 Clca2 protein_coding protein_coding MGP_WSBEiJ_T0063049.1 MGP_WSBEiJ_G0027191.1 mouse_genomes_project 3 147528077 147556673 - MGP_WSBEiJ_P0063049 Clca2 protein_coding protein_coding MGP_WSBEiJ_T0063050.1 MGP_WSBEiJ_G0027191.1 mouse_genomes_project 3 147556410 147557010 - Clca2 protein_coding processed_transcript MGP_WSBEiJ_T0061009.1 MGP_WSBEiJ_G0026719.1 mouse_genomes_project 3 90224557 90227783 + MGP_WSBEiJ_P0061009 S100a5 protein_coding protein_coding MGP_WSBEiJ_T0061010.1 MGP_WSBEiJ_G0026719.1 mouse_genomes_project 3 90225812 90227783 + MGP_WSBEiJ_P0061010 S100a5 protein_coding protein_coding MGP_WSBEiJ_T0013627.1 MGP_WSBEiJ_G0011757.1 mouse_genomes_project 3 35648573 35649048 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097346.1 MGP_WSBEiJ_G0036020.1 mouse_genomes_project 3 102034292 102035613 - Gm42941 sense_intronic sense_intronic MGP_WSBEiJ_T0059497.1 MGP_WSBEiJ_G0026411.1 mouse_genomes_project 3 34980474 34990813 + MGP_WSBEiJ_P0059497 Bbs12 protein_coding protein_coding MGP_WSBEiJ_T0059498.1 MGP_WSBEiJ_G0026411.1 mouse_genomes_project 3 34980476 34990816 + MGP_WSBEiJ_P0059498 Bbs12 protein_coding protein_coding MGP_WSBEiJ_T0001310.1 MGP_WSBEiJ_G0001239.1 mouse_genomes_project 3 131289371 131291042 + TEC TEC MGP_WSBEiJ_T0007482.1 MGP_WSBEiJ_G0006131.1 mouse_genomes_project 3 87559711 87565264 - AI849053 lincRNA lincRNA MGP_WSBEiJ_T0061864.1 MGP_WSBEiJ_G0026947.1 mouse_genomes_project 3 105387724 105392687 + MGP_WSBEiJ_P0061864 Ppm1j protein_coding protein_coding MGP_WSBEiJ_T0061865.1 MGP_WSBEiJ_G0026947.1 mouse_genomes_project 3 105392277 105392687 + Ppm1j protein_coding retained_intron MGP_WSBEiJ_T0013609.1 MGP_WSBEiJ_G0011739.1 mouse_genomes_project 3 31693715 31694610 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062249.1 MGP_WSBEiJ_G0027041.1 mouse_genomes_project 3 117014510 117043046 + MGP_WSBEiJ_P0062249 Dph5 protein_coding protein_coding MGP_WSBEiJ_T0062250.1 MGP_WSBEiJ_G0027041.1 mouse_genomes_project 3 117014525 117015152 + MGP_WSBEiJ_P0062250 Dph5 protein_coding protein_coding MGP_WSBEiJ_T0062251.1 MGP_WSBEiJ_G0027041.1 mouse_genomes_project 3 117014819 117026705 + MGP_WSBEiJ_P0062251 Dph5 protein_coding protein_coding MGP_WSBEiJ_T0062252.1 MGP_WSBEiJ_G0027041.1 mouse_genomes_project 3 117014837 117048328 + MGP_WSBEiJ_P0062252 Dph5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062253.1 MGP_WSBEiJ_G0027041.1 mouse_genomes_project 3 117014845 117028069 + MGP_WSBEiJ_P0062253 Dph5 protein_coding protein_coding MGP_WSBEiJ_T0062254.1 MGP_WSBEiJ_G0027041.1 mouse_genomes_project 3 117014855 117043208 + MGP_WSBEiJ_P0062254 Dph5 protein_coding protein_coding MGP_WSBEiJ_T0062255.1 MGP_WSBEiJ_G0027041.1 mouse_genomes_project 3 117014866 117018944 + Dph5 protein_coding retained_intron MGP_WSBEiJ_T0062256.1 MGP_WSBEiJ_G0027041.1 mouse_genomes_project 3 117014867 117019655 + Dph5 protein_coding retained_intron MGP_WSBEiJ_T0059910.1 MGP_WSBEiJ_G0026494.1 mouse_genomes_project 3 58341245 58353973 + Aadac protein_coding processed_transcript MGP_WSBEiJ_T0059911.1 MGP_WSBEiJ_G0026494.1 mouse_genomes_project 3 58347223 58355629 + MGP_WSBEiJ_P0059911 Aadac protein_coding protein_coding MGP_WSBEiJ_T0059912.1 MGP_WSBEiJ_G0026494.1 mouse_genomes_project 3 58347338 58351544 + Aadac protein_coding retained_intron MGP_WSBEiJ_T0004319.1 MGP_WSBEiJ_G0003768.1 mouse_genomes_project 3 147181249 147208969 + antisense antisense MGP_WSBEiJ_T0062063.1 MGP_WSBEiJ_G0027000.1 mouse_genomes_project 3 108771276 108779693 - MGP_WSBEiJ_P0062063 Gstm1 protein_coding protein_coding MGP_WSBEiJ_T0062064.1 MGP_WSBEiJ_G0027000.1 mouse_genomes_project 3 108771282 108772338 - Gstm1 protein_coding processed_transcript MGP_WSBEiJ_T0062065.1 MGP_WSBEiJ_G0027000.1 mouse_genomes_project 3 108771412 108778320 - MGP_WSBEiJ_P0062065 Gstm1 protein_coding protein_coding MGP_WSBEiJ_T0062066.1 MGP_WSBEiJ_G0027000.1 mouse_genomes_project 3 108771648 108779526 - MGP_WSBEiJ_P0062066 Gstm1 protein_coding protein_coding MGP_WSBEiJ_T0004246.1 MGP_WSBEiJ_G0003722.1 mouse_genomes_project 3 104985874 104995473 + Gm43257 antisense antisense MGP_WSBEiJ_T0001275.1 MGP_WSBEiJ_G0001205.1 mouse_genomes_project 3 124030707 124033265 - TEC TEC MGP_WSBEiJ_T0061738.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103507524 103552061 + MGP_WSBEiJ_P0061738 Csde1 protein_coding protein_coding MGP_WSBEiJ_T0061739.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103507599 103551868 + MGP_WSBEiJ_P0061739 Csde1 protein_coding protein_coding MGP_WSBEiJ_T0061740.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103507605 103552063 + MGP_WSBEiJ_P0061740 Csde1 protein_coding protein_coding MGP_WSBEiJ_T0061741.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103507612 103551579 + MGP_WSBEiJ_P0061741 Csde1 protein_coding protein_coding MGP_WSBEiJ_T0061742.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103507656 103551681 + MGP_WSBEiJ_P0061742 Csde1 protein_coding protein_coding MGP_WSBEiJ_T0061743.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103517563 103534036 + Csde1 protein_coding retained_intron MGP_WSBEiJ_T0061744.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103517656 103519459 + Csde1 protein_coding retained_intron MGP_WSBEiJ_T0061745.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103518726 103535164 + Csde1 protein_coding processed_transcript MGP_WSBEiJ_T0061746.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103531018 103535917 + Csde1 protein_coding processed_transcript MGP_WSBEiJ_T0061747.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103531277 103535343 + Csde1 protein_coding retained_intron MGP_WSBEiJ_T0061748.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103531306 103539662 + MGP_WSBEiJ_P0061748 Csde1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061749.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103534471 103551663 + MGP_WSBEiJ_P0061749 Csde1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061750.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103534820 103535519 + Csde1 protein_coding retained_intron MGP_WSBEiJ_T0061751.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103542858 103543930 + Csde1 protein_coding retained_intron MGP_WSBEiJ_T0061752.1 MGP_WSBEiJ_G0026925.1 mouse_genomes_project 3 103548902 103549981 + Csde1 protein_coding retained_intron MGP_WSBEiJ_T0010340.1 MGP_WSBEiJ_G0008497.1 mouse_genomes_project 3 34104297 34104361 - Mir7009 miRNA miRNA MGP_WSBEiJ_T0061054.1 MGP_WSBEiJ_G0026751.1 mouse_genomes_project 3 92398102 92403794 - MGP_WSBEiJ_P0061054 Lce1a1 protein_coding protein_coding MGP_WSBEiJ_T0062000.1 MGP_WSBEiJ_G0026984.1 mouse_genomes_project 3 108015474 108037202 + MGP_WSBEiJ_P0062000 Slc16a4 protein_coding protein_coding MGP_WSBEiJ_T0062001.1 MGP_WSBEiJ_G0026984.1 mouse_genomes_project 3 108015538 108027673 + Slc16a4 protein_coding retained_intron MGP_WSBEiJ_T0062002.1 MGP_WSBEiJ_G0026984.1 mouse_genomes_project 3 108015559 108032807 + MGP_WSBEiJ_P0062002 Slc16a4 protein_coding protein_coding MGP_WSBEiJ_T0058977.1 MGP_WSBEiJ_G0026308.1 mouse_genomes_project 3 7248882 7262899 - MGP_WSBEiJ_P0058977 Gm38303 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097385.1 MGP_WSBEiJ_G0036059.1 mouse_genomes_project 3 146895892 146896665 - Gm43560 sense_intronic sense_intronic MGP_WSBEiJ_T0001144.1 MGP_WSBEiJ_G0001076.1 mouse_genomes_project 3 48420948 48424957 - TEC TEC MGP_WSBEiJ_T0001084.1 MGP_WSBEiJ_G0001016.1 mouse_genomes_project 3 16208390 16209102 - TEC TEC MGP_WSBEiJ_T0001228.1 MGP_WSBEiJ_G0001158.1 mouse_genomes_project 3 89920217 89922776 + TEC TEC MGP_WSBEiJ_T0001356.1 MGP_WSBEiJ_G0001285.1 mouse_genomes_project 3 159673964 159676532 + TEC TEC MGP_WSBEiJ_T0062343.1 MGP_WSBEiJ_G0027061.1 mouse_genomes_project 3 119019457 119087250 - MGP_WSBEiJ_P0062343 Snx7 protein_coding protein_coding MGP_WSBEiJ_T0062344.1 MGP_WSBEiJ_G0027061.1 mouse_genomes_project 3 119019583 119112186 - MGP_WSBEiJ_P0062344 Snx7 protein_coding protein_coding MGP_WSBEiJ_T0062345.1 MGP_WSBEiJ_G0027061.1 mouse_genomes_project 3 119019583 119112307 - MGP_WSBEiJ_P0062345 Snx7 protein_coding protein_coding MGP_WSBEiJ_T0062346.1 MGP_WSBEiJ_G0027061.1 mouse_genomes_project 3 119065367 119070552 - Snx7 protein_coding retained_intron MGP_WSBEiJ_T0059293.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29958562 29969137 + MGP_WSBEiJ_P0059293 Zfp639 protein_coding protein_coding MGP_WSBEiJ_T0059294.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29958838 29969047 + MGP_WSBEiJ_P0059294 Zfp639 protein_coding protein_coding MGP_WSBEiJ_T0059295.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29958967 29967870 + MGP_WSBEiJ_P0059295 Zfp639 protein_coding protein_coding MGP_WSBEiJ_T0059296.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29959199 29961479 + Zfp639 protein_coding processed_transcript MGP_WSBEiJ_T0059297.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29960481 29967933 + Zfp639 protein_coding retained_intron MGP_WSBEiJ_T0059298.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29961303 29967872 + MGP_WSBEiJ_P0059298 Zfp639 protein_coding protein_coding MGP_WSBEiJ_T0059299.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29963598 29968989 + MGP_WSBEiJ_P0059299 Zfp639 protein_coding protein_coding MGP_WSBEiJ_T0059300.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29965383 29968821 + MGP_WSBEiJ_P0059300 Zfp639 protein_coding protein_coding MGP_WSBEiJ_T0059301.1 MGP_WSBEiJ_G0026380.1 mouse_genomes_project 3 29967102 29967864 + Zfp639 protein_coding retained_intron MGP_WSBEiJ_T0060795.1 MGP_WSBEiJ_G0026678.1 mouse_genomes_project 3 88864777 88874322 - MGP_WSBEiJ_P0060795 Zbtb7b protein_coding protein_coding MGP_WSBEiJ_T0060796.1 MGP_WSBEiJ_G0026678.1 mouse_genomes_project 3 88864777 88880695 - MGP_WSBEiJ_P0060796 Zbtb7b protein_coding protein_coding MGP_WSBEiJ_T0060797.1 MGP_WSBEiJ_G0026678.1 mouse_genomes_project 3 88864777 88879461 - MGP_WSBEiJ_P0060797 Zbtb7b protein_coding protein_coding MGP_WSBEiJ_T0060798.1 MGP_WSBEiJ_G0026678.1 mouse_genomes_project 3 88864777 88874801 - MGP_WSBEiJ_P0060798 Zbtb7b protein_coding protein_coding MGP_WSBEiJ_T0060799.1 MGP_WSBEiJ_G0026678.1 mouse_genomes_project 3 88868271 88881341 - MGP_WSBEiJ_P0060799 Zbtb7b protein_coding protein_coding MGP_WSBEiJ_T0060800.1 MGP_WSBEiJ_G0026678.1 mouse_genomes_project 3 88868555 88881298 - MGP_WSBEiJ_P0060800 Zbtb7b protein_coding protein_coding MGP_WSBEiJ_T0060801.1 MGP_WSBEiJ_G0026678.1 mouse_genomes_project 3 88879904 88882439 - Zbtb7b protein_coding processed_transcript MGP_WSBEiJ_T0001366.1 MGP_WSBEiJ_G0001295.1 mouse_genomes_project 3 161331579 161335918 + TEC TEC MGP_WSBEiJ_T0001098.1 MGP_WSBEiJ_G0001030.1 mouse_genomes_project 3 27895363 27897451 - TEC TEC MGP_WSBEiJ_T0001162.1 MGP_WSBEiJ_G0001093.1 mouse_genomes_project 3 49774145 49779113 - TEC TEC MGP_WSBEiJ_T0061506.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96761219 96770939 + MGP_WSBEiJ_P0061506 Pias3 protein_coding protein_coding MGP_WSBEiJ_T0061507.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96761277 96770451 + MGP_WSBEiJ_P0061507 Pias3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061508.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96761910 96764471 + MGP_WSBEiJ_P0061508 Pias3 protein_coding protein_coding MGP_WSBEiJ_T0061509.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96761917 96771047 + MGP_WSBEiJ_P0061509 Pias3 protein_coding protein_coding MGP_WSBEiJ_T0061510.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96761951 96770950 + MGP_WSBEiJ_P0061510 Pias3 protein_coding protein_coding MGP_WSBEiJ_T0061511.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96761967 96764762 + Pias3 protein_coding retained_intron MGP_WSBEiJ_T0061512.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96762028 96766470 + MGP_WSBEiJ_P0061512 Pias3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061513.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96765256 96768797 + Pias3 protein_coding retained_intron MGP_WSBEiJ_T0061514.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96766131 96768862 + Pias3 protein_coding retained_intron MGP_WSBEiJ_T0061515.1 MGP_WSBEiJ_G0026866.1 mouse_genomes_project 3 96769141 96770110 + MGP_WSBEiJ_P0061515 Pias3 protein_coding protein_coding MGP_WSBEiJ_T0013975.1 MGP_WSBEiJ_G0012105.1 mouse_genomes_project 3 154803670 154804148 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099454.1 MGP_WSBEiJ_G0038117.1 mouse_genomes_project 3 89559228 89559364 - Gm24608 snoRNA snoRNA MGP_WSBEiJ_T0004309.1 MGP_WSBEiJ_G0003761.1 mouse_genomes_project 3 139899077 139901280 - Gm43087 antisense antisense MGP_WSBEiJ_T0013661.1 MGP_WSBEiJ_G0011791.1 mouse_genomes_project 3 47620429 47620667 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062231.1 MGP_WSBEiJ_G0027037.1 mouse_genomes_project 3 114638616 114665130 - MGP_WSBEiJ_P0062231 Rnpc3 protein_coding protein_coding MGP_WSBEiJ_T0062232.1 MGP_WSBEiJ_G0027037.1 mouse_genomes_project 3 114638856 114665014 - MGP_WSBEiJ_P0062232 Rnpc3 protein_coding protein_coding MGP_WSBEiJ_T0062233.1 MGP_WSBEiJ_G0027037.1 mouse_genomes_project 3 114638863 114665130 - MGP_WSBEiJ_P0062233 Rnpc3 protein_coding protein_coding MGP_WSBEiJ_T0062234.1 MGP_WSBEiJ_G0027037.1 mouse_genomes_project 3 114639735 114665130 - MGP_WSBEiJ_P0062234 Rnpc3 protein_coding protein_coding MGP_WSBEiJ_T0062235.1 MGP_WSBEiJ_G0027037.1 mouse_genomes_project 3 114644532 114648761 - Rnpc3 protein_coding processed_transcript MGP_WSBEiJ_T0062236.1 MGP_WSBEiJ_G0027037.1 mouse_genomes_project 3 114649873 114655286 - Rnpc3 protein_coding processed_transcript MGP_WSBEiJ_T0062237.1 MGP_WSBEiJ_G0027037.1 mouse_genomes_project 3 114650122 114654637 - Rnpc3 protein_coding processed_transcript MGP_WSBEiJ_T0062238.1 MGP_WSBEiJ_G0027037.1 mouse_genomes_project 3 114660398 114665060 - Rnpc3 protein_coding retained_intron MGP_WSBEiJ_T0060424.1 MGP_WSBEiJ_G0026615.1 mouse_genomes_project 3 87267641 87271739 + MGP_WSBEiJ_P0060424 Mrpl24 protein_coding protein_coding MGP_WSBEiJ_T0060425.1 MGP_WSBEiJ_G0026615.1 mouse_genomes_project 3 87267641 87271729 + MGP_WSBEiJ_P0060425 Mrpl24 protein_coding protein_coding MGP_WSBEiJ_T0060426.1 MGP_WSBEiJ_G0026615.1 mouse_genomes_project 3 87267671 87270107 + MGP_WSBEiJ_P0060426 Mrpl24 protein_coding protein_coding MGP_WSBEiJ_T0060427.1 MGP_WSBEiJ_G0026615.1 mouse_genomes_project 3 87267692 87268655 + Mrpl24 protein_coding retained_intron MGP_WSBEiJ_T0060428.1 MGP_WSBEiJ_G0026615.1 mouse_genomes_project 3 87267698 87271739 + MGP_WSBEiJ_P0060428 Mrpl24 protein_coding protein_coding MGP_WSBEiJ_T0060429.1 MGP_WSBEiJ_G0026615.1 mouse_genomes_project 3 87269690 87271739 + MGP_WSBEiJ_P0060429 Mrpl24 protein_coding protein_coding MGP_WSBEiJ_T0001135.1 MGP_WSBEiJ_G0001067.1 mouse_genomes_project 3 40262053 40262598 + TEC TEC MGP_WSBEiJ_T0100080.1 MGP_WSBEiJ_G0038690.1 mouse_genomes_project 3 96659755 96683819 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100081.1 MGP_WSBEiJ_G0038690.1 mouse_genomes_project 3 96659758 96683818 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0013800.1 MGP_WSBEiJ_G0011930.1 mouse_genomes_project 3 93205802 93206585 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017358.1 MGP_WSBEiJ_G0014924.1 mouse_genomes_project 3 43049869 43149080 - processed_transcript lincRNA MGP_WSBEiJ_T0017359.1 MGP_WSBEiJ_G0014924.1 mouse_genomes_project 3 43050782 43133183 - processed_transcript lincRNA MGP_WSBEiJ_T0017360.1 MGP_WSBEiJ_G0014924.1 mouse_genomes_project 3 43099888 43149025 - processed_transcript retained_intron MGP_WSBEiJ_T0059128.1 MGP_WSBEiJ_G0026348.1 mouse_genomes_project 3 23824710 24166898 + MGP_WSBEiJ_P0059128 Spata16 protein_coding protein_coding MGP_WSBEiJ_T0059129.1 MGP_WSBEiJ_G0026348.1 mouse_genomes_project 3 23824740 24112581 + MGP_WSBEiJ_P0059129 Spata16 protein_coding protein_coding MGP_WSBEiJ_T0013529.1 MGP_WSBEiJ_G0011659.1 mouse_genomes_project 3 4229102 4230135 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099465.1 MGP_WSBEiJ_G0038128.1 mouse_genomes_project 3 109231925 109232049 + Gm22942 snoRNA snoRNA MGP_WSBEiJ_T0013634.1 MGP_WSBEiJ_G0011764.1 mouse_genomes_project 3 38525281 38525729 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062720.1 MGP_WSBEiJ_G0027125.1 mouse_genomes_project 3 133892288 133994631 + MGP_WSBEiJ_P0062720 Dkk2 protein_coding protein_coding MGP_WSBEiJ_T0013523.1 MGP_WSBEiJ_G0011653.1 mouse_genomes_project 3 2941169 2944099 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097349.1 MGP_WSBEiJ_G0036023.1 mouse_genomes_project 3 102958640 102961791 + Gm42679 sense_intronic sense_intronic MGP_WSBEiJ_T0004154.1 MGP_WSBEiJ_G0003657.1 mouse_genomes_project 3 39222807 39224227 - Gm31266 antisense antisense MGP_WSBEiJ_T0001153.1 MGP_WSBEiJ_G0001085.1 mouse_genomes_project 3 49294714 49295130 - TEC TEC MGP_WSBEiJ_T0001202.1 MGP_WSBEiJ_G0001132.1 mouse_genomes_project 3 64445708 64447269 - TEC TEC MGP_WSBEiJ_T0099490.1 MGP_WSBEiJ_G0038153.1 mouse_genomes_project 3 160241481 160241613 + Gm24373 snoRNA snoRNA MGP_WSBEiJ_T0007558.1 MGP_WSBEiJ_G0006188.1 mouse_genomes_project 3 119700761 119701989 + Gm9916 lincRNA lincRNA MGP_WSBEiJ_T0058955.1 MGP_WSBEiJ_G0026300.1 mouse_genomes_project 3 6540228 6686381 - MGP_WSBEiJ_P0058955 Pag1 protein_coding protein_coding MGP_WSBEiJ_T0058956.1 MGP_WSBEiJ_G0026300.1 mouse_genomes_project 3 6544565 6686332 - MGP_WSBEiJ_P0058956 Pag1 protein_coding protein_coding MGP_WSBEiJ_T0058957.1 MGP_WSBEiJ_G0026300.1 mouse_genomes_project 3 6545429 6557724 - Pag1 protein_coding retained_intron MGP_WSBEiJ_T0058958.1 MGP_WSBEiJ_G0026300.1 mouse_genomes_project 3 6597910 6686065 - Pag1 protein_coding retained_intron MGP_WSBEiJ_T0058959.1 MGP_WSBEiJ_G0026300.1 mouse_genomes_project 3 6680120 6686332 - Pag1 protein_coding processed_transcript MGP_WSBEiJ_T0100790.1 MGP_WSBEiJ_G0039248.1 mouse_genomes_project 3 98961327 98969304 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007658.1 MGP_WSBEiJ_G0006265.1 mouse_genomes_project 3 154140059 154144355 + Gm42949 lincRNA lincRNA MGP_WSBEiJ_T0001267.1 MGP_WSBEiJ_G0001197.1 mouse_genomes_project 3 122519819 122522441 + TEC TEC MGP_WSBEiJ_T0060173.1 MGP_WSBEiJ_G0026555.1 mouse_genomes_project 3 78636829 78648758 + Ppid protein_coding retained_intron MGP_WSBEiJ_T0060174.1 MGP_WSBEiJ_G0026555.1 mouse_genomes_project 3 78636852 78649132 + MGP_WSBEiJ_P0060174 Ppid protein_coding protein_coding MGP_WSBEiJ_T0060175.1 MGP_WSBEiJ_G0026555.1 mouse_genomes_project 3 78636975 78640795 + Ppid protein_coding processed_transcript MGP_WSBEiJ_T0060176.1 MGP_WSBEiJ_G0026555.1 mouse_genomes_project 3 78639176 78643248 + MGP_WSBEiJ_P0060176 Ppid protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060177.1 MGP_WSBEiJ_G0026555.1 mouse_genomes_project 3 78641643 78643675 + Ppid protein_coding retained_intron MGP_WSBEiJ_T0060178.1 MGP_WSBEiJ_G0026555.1 mouse_genomes_project 3 78644195 78647810 + Ppid protein_coding retained_intron MGP_WSBEiJ_T0100798.1 MGP_WSBEiJ_G0039256.1 mouse_genomes_project 3 107098994 107100096 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0061458.1 MGP_WSBEiJ_G0026844.1 mouse_genomes_project 3 96194931 96196833 - MGP_WSBEiJ_P0061458 Bola1 protein_coding protein_coding MGP_WSBEiJ_T0061459.1 MGP_WSBEiJ_G0026844.1 mouse_genomes_project 3 96194931 96195930 - MGP_WSBEiJ_P0061459 Bola1 protein_coding protein_coding MGP_WSBEiJ_T0061460.1 MGP_WSBEiJ_G0026844.1 mouse_genomes_project 3 96195206 96212710 - MGP_WSBEiJ_P0061460 Bola1 protein_coding protein_coding MGP_WSBEiJ_T0063438.1 MGP_WSBEiJ_G0027253.1 mouse_genomes_project 3 162841821 162942865 + MGP_WSBEiJ_P0063438 Wls protein_coding protein_coding MGP_WSBEiJ_T0063439.1 MGP_WSBEiJ_G0027253.1 mouse_genomes_project 3 162841886 162945506 + MGP_WSBEiJ_P0063439 Wls protein_coding protein_coding MGP_WSBEiJ_T0063440.1 MGP_WSBEiJ_G0027253.1 mouse_genomes_project 3 162841888 162918278 + Wls protein_coding retained_intron MGP_WSBEiJ_T0063441.1 MGP_WSBEiJ_G0027253.1 mouse_genomes_project 3 162841888 162919253 + Wls protein_coding retained_intron MGP_WSBEiJ_T0063442.1 MGP_WSBEiJ_G0027253.1 mouse_genomes_project 3 162841888 162941745 + MGP_WSBEiJ_P0063442 Wls protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063443.1 MGP_WSBEiJ_G0027253.1 mouse_genomes_project 3 162842059 162878519 + Wls protein_coding retained_intron MGP_WSBEiJ_T0063444.1 MGP_WSBEiJ_G0027253.1 mouse_genomes_project 3 162850615 162854152 + Wls protein_coding retained_intron MGP_WSBEiJ_T0098226.1 MGP_WSBEiJ_G0036889.1 mouse_genomes_project 3 154766050 154766112 - Gm25056 snRNA snRNA MGP_WSBEiJ_T0061293.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95217059 95221678 + Fam63a protein_coding processed_transcript MGP_WSBEiJ_T0061294.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95217131 95223551 + Fam63a protein_coding processed_transcript MGP_WSBEiJ_T0061295.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95217201 95219231 + Fam63a protein_coding processed_transcript MGP_WSBEiJ_T0061296.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95217559 95220572 + Fam63a protein_coding processed_transcript MGP_WSBEiJ_T0061297.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95218658 95231786 + MGP_WSBEiJ_P0061297 Fam63a protein_coding protein_coding MGP_WSBEiJ_T0061298.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95218658 95231786 + MGP_WSBEiJ_P0061298 Fam63a protein_coding protein_coding MGP_WSBEiJ_T0061299.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95218929 95227428 + Fam63a protein_coding retained_intron MGP_WSBEiJ_T0061300.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95219316 95223551 + Fam63a protein_coding processed_transcript MGP_WSBEiJ_T0061301.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95221553 95223729 + MGP_WSBEiJ_P0061301 Fam63a protein_coding protein_coding MGP_WSBEiJ_T0061302.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95221913 95223675 + Fam63a protein_coding processed_transcript MGP_WSBEiJ_T0061303.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95223662 95231783 + MGP_WSBEiJ_P0061303 Fam63a protein_coding protein_coding MGP_WSBEiJ_T0061304.1 MGP_WSBEiJ_G0026816.1 mouse_genomes_project 3 95227606 95231781 + Fam63a protein_coding processed_transcript MGP_WSBEiJ_T0099422.1 MGP_WSBEiJ_G0038085.1 mouse_genomes_project 3 30885503 30885646 - Gm24780 snoRNA snoRNA MGP_WSBEiJ_T0013779.1 MGP_WSBEiJ_G0011909.1 mouse_genomes_project 3 86369075 86369384 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004150.1 MGP_WSBEiJ_G0003653.1 mouse_genomes_project 3 34897030 34898172 + Gm12534 antisense antisense MGP_WSBEiJ_T0013628.1 MGP_WSBEiJ_G0011758.1 mouse_genomes_project 3 35897638 35897981 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061861.1 MGP_WSBEiJ_G0026945.1 mouse_genomes_project 3 105223278 105245595 + MGP_WSBEiJ_P0061861 Slc16a1 protein_coding protein_coding MGP_WSBEiJ_T0062272.1 MGP_WSBEiJ_G0027046.1 mouse_genomes_project 3 117410810 117574738 - MGP_WSBEiJ_P0062272 Cdc14a protein_coding protein_coding MGP_WSBEiJ_T0062273.1 MGP_WSBEiJ_G0027046.1 mouse_genomes_project 3 117410810 117574692 - MGP_WSBEiJ_P0062273 Cdc14a protein_coding protein_coding MGP_WSBEiJ_T0062274.1 MGP_WSBEiJ_G0027046.1 mouse_genomes_project 3 117466699 117573353 - MGP_WSBEiJ_P0062274 Cdc14a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062275.1 MGP_WSBEiJ_G0027046.1 mouse_genomes_project 3 117471588 117574738 - Cdc14a protein_coding retained_intron MGP_WSBEiJ_T0062276.1 MGP_WSBEiJ_G0027046.1 mouse_genomes_project 3 117548340 117573729 - Cdc14a protein_coding retained_intron MGP_WSBEiJ_T0062277.1 MGP_WSBEiJ_G0027046.1 mouse_genomes_project 3 117551540 117553642 - Cdc14a protein_coding retained_intron MGP_WSBEiJ_T0062278.1 MGP_WSBEiJ_G0027046.1 mouse_genomes_project 3 117552261 117574601 - Cdc14a protein_coding processed_transcript MGP_WSBEiJ_T0063281.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155574402 155652088 + MGP_WSBEiJ_P0063281 Pigk protein_coding protein_coding MGP_WSBEiJ_T0063282.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155574408 155604777 + Pigk protein_coding retained_intron MGP_WSBEiJ_T0063283.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155574415 155702332 + MGP_WSBEiJ_P0063283 Pigk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063284.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155574415 155649644 + MGP_WSBEiJ_P0063284 Pigk protein_coding protein_coding MGP_WSBEiJ_T0063285.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155574422 155845259 + MGP_WSBEiJ_P0063285 Pigk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063286.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155574425 155649375 + MGP_WSBEiJ_P0063286 Pigk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063287.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155601628 155603803 + Pigk protein_coding processed_transcript MGP_WSBEiJ_T0063288.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155601847 155649570 + MGP_WSBEiJ_P0063288 Pigk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063289.1 MGP_WSBEiJ_G0027228.1 mouse_genomes_project 3 155626800 155629988 + Pigk protein_coding processed_transcript MGP_WSBEiJ_T0060770.1 MGP_WSBEiJ_G0026673.1 mouse_genomes_project 3 88800720 88810041 - MGP_WSBEiJ_P0060770 Efna3 protein_coding protein_coding MGP_WSBEiJ_T0060771.1 MGP_WSBEiJ_G0026673.1 mouse_genomes_project 3 88802185 88809963 - MGP_WSBEiJ_P0060771 Efna3 protein_coding protein_coding MGP_WSBEiJ_T0060772.1 MGP_WSBEiJ_G0026673.1 mouse_genomes_project 3 88802680 88808707 - Efna3 protein_coding processed_transcript MGP_WSBEiJ_T0061947.1 MGP_WSBEiJ_G0026969.1 mouse_genomes_project 3 106984635 107007356 + MGP_WSBEiJ_P0061947 protein_coding protein_coding MGP_WSBEiJ_T0061948.1 MGP_WSBEiJ_G0026969.1 mouse_genomes_project 3 106990161 106991473 + protein_coding retained_intron MGP_WSBEiJ_T0010331.1 MGP_WSBEiJ_G0008488.1 mouse_genomes_project 3 24805514 24805610 - Mir3092 miRNA miRNA MGP_WSBEiJ_T0060562.1 MGP_WSBEiJ_G0026643.1 mouse_genomes_project 3 87933462 87939722 - MGP_WSBEiJ_P0060562 Rab25 protein_coding protein_coding MGP_WSBEiJ_T0060563.1 MGP_WSBEiJ_G0026643.1 mouse_genomes_project 3 87933742 87939671 - MGP_WSBEiJ_P0060563 Rab25 protein_coding protein_coding MGP_WSBEiJ_T0060564.1 MGP_WSBEiJ_G0026643.1 mouse_genomes_project 3 87934109 87934948 - Rab25 protein_coding retained_intron MGP_WSBEiJ_T0060565.1 MGP_WSBEiJ_G0026643.1 mouse_genomes_project 3 87936075 87939704 - Rab25 protein_coding retained_intron MGP_WSBEiJ_T0007555.1 MGP_WSBEiJ_G0006185.1 mouse_genomes_project 3 118260891 118279631 - 1700061I17Rik lincRNA lincRNA MGP_WSBEiJ_T0013844.1 MGP_WSBEiJ_G0011974.1 mouse_genomes_project 3 104692980 104693818 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059836.1 MGP_WSBEiJ_G0026473.1 mouse_genomes_project 3 55864480 55902935 - MGP_WSBEiJ_P0059836 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059837.1 MGP_WSBEiJ_G0026473.1 mouse_genomes_project 3 55864524 55902482 - MGP_WSBEiJ_P0059837 protein_coding unknown_likely_coding MGP_WSBEiJ_T0059838.1 MGP_WSBEiJ_G0026473.1 mouse_genomes_project 3 55875338 55902671 - MGP_WSBEiJ_P0059838 protein_coding protein_coding MGP_WSBEiJ_T0059839.1 MGP_WSBEiJ_G0026473.1 mouse_genomes_project 3 55877166 55902673 - MGP_WSBEiJ_P0059839 protein_coding protein_coding MGP_WSBEiJ_T0060746.1 MGP_WSBEiJ_G0026668.1 mouse_genomes_project 3 88714054 88725998 - MGP_WSBEiJ_P0060746 Trim46 protein_coding protein_coding MGP_WSBEiJ_T0060747.1 MGP_WSBEiJ_G0026668.1 mouse_genomes_project 3 88714054 88726184 - MGP_WSBEiJ_P0060747 Trim46 protein_coding protein_coding MGP_WSBEiJ_T0060748.1 MGP_WSBEiJ_G0026668.1 mouse_genomes_project 3 88714054 88727521 - MGP_WSBEiJ_P0060748 Trim46 protein_coding protein_coding MGP_WSBEiJ_T0060749.1 MGP_WSBEiJ_G0026668.1 mouse_genomes_project 3 88714712 88719225 - Trim46 protein_coding processed_transcript MGP_WSBEiJ_T0060750.1 MGP_WSBEiJ_G0026668.1 mouse_genomes_project 3 88714745 88727496 - MGP_WSBEiJ_P0060750 Trim46 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060751.1 MGP_WSBEiJ_G0026668.1 mouse_genomes_project 3 88725278 88727933 - MGP_WSBEiJ_P0060751 Trim46 protein_coding protein_coding MGP_WSBEiJ_T0059892.1 MGP_WSBEiJ_G0026486.1 mouse_genomes_project 3 57456916 57458108 - Gpr87 protein_coding retained_intron MGP_WSBEiJ_T0059893.1 MGP_WSBEiJ_G0026486.1 mouse_genomes_project 3 57456916 57473169 - MGP_WSBEiJ_P0059893 Gpr87 protein_coding protein_coding MGP_WSBEiJ_T0059894.1 MGP_WSBEiJ_G0026486.1 mouse_genomes_project 3 57456999 57458079 - MGP_WSBEiJ_P0059894 Gpr87 protein_coding protein_coding MGP_WSBEiJ_T0007624.1 MGP_WSBEiJ_G0006242.1 mouse_genomes_project 3 145981983 145983761 + Gm42704 lincRNA lincRNA MGP_WSBEiJ_T0060137.1 MGP_WSBEiJ_G0026548.1 mouse_genomes_project 3 74397652 74442038 - MGP_WSBEiJ_P0060137 Pdcd10 protein_coding protein_coding MGP_WSBEiJ_T0060138.1 MGP_WSBEiJ_G0026548.1 mouse_genomes_project 3 74398446 74403000 - Pdcd10 protein_coding retained_intron MGP_WSBEiJ_T0060139.1 MGP_WSBEiJ_G0026548.1 mouse_genomes_project 3 74399484 74442009 - MGP_WSBEiJ_P0060139 Pdcd10 protein_coding protein_coding MGP_WSBEiJ_T0060140.1 MGP_WSBEiJ_G0026548.1 mouse_genomes_project 3 74410862 74441941 - MGP_WSBEiJ_P0060140 Pdcd10 protein_coding protein_coding MGP_WSBEiJ_T0060141.1 MGP_WSBEiJ_G0026548.1 mouse_genomes_project 3 74415361 74442019 - Pdcd10 protein_coding retained_intron MGP_WSBEiJ_T0001320.1 MGP_WSBEiJ_G0001249.1 mouse_genomes_project 3 134612130 134614099 + TEC TEC MGP_WSBEiJ_T0004153.1 MGP_WSBEiJ_G0003656.1 mouse_genomes_project 3 36702425 36703505 - Gm43539 antisense antisense MGP_WSBEiJ_T0001077.1 MGP_WSBEiJ_G0001009.1 mouse_genomes_project 3 7162514 7163011 + TEC TEC MGP_WSBEiJ_T0013837.1 MGP_WSBEiJ_G0011967.1 mouse_genomes_project 3 103163856 103163983 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059635.1 MGP_WSBEiJ_G0026433.1 mouse_genomes_project 3 47759558 47773533 - MGP_WSBEiJ_P0059635 Pcdh18 protein_coding protein_coding MGP_WSBEiJ_T0059636.1 MGP_WSBEiJ_G0026433.1 mouse_genomes_project 3 47759560 47773502 - MGP_WSBEiJ_P0059636 Pcdh18 protein_coding protein_coding MGP_WSBEiJ_T0059637.1 MGP_WSBEiJ_G0026433.1 mouse_genomes_project 3 47761542 47773542 - Pcdh18 protein_coding processed_transcript MGP_WSBEiJ_T0059638.1 MGP_WSBEiJ_G0026433.1 mouse_genomes_project 3 47768633 47771682 - MGP_WSBEiJ_P0059638 Pcdh18 protein_coding protein_coding MGP_WSBEiJ_T0059639.1 MGP_WSBEiJ_G0026433.1 mouse_genomes_project 3 47771043 47773500 - Pcdh18 protein_coding processed_transcript MGP_WSBEiJ_T0013642.1 MGP_WSBEiJ_G0011772.1 mouse_genomes_project 3 41640252 41640595 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001119.1 MGP_WSBEiJ_G0001051.1 mouse_genomes_project 3 35008104 35010580 + TEC TEC MGP_WSBEiJ_T0007445.1 MGP_WSBEiJ_G0006099.1 mouse_genomes_project 3 61908177 61910945 - lincRNA lincRNA MGP_WSBEiJ_T0062517.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186090 128283294 + Camk2d protein_coding processed_transcript MGP_WSBEiJ_T0062518.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186739 128454785 + MGP_WSBEiJ_P0062518 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062519.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186748 128454783 + MGP_WSBEiJ_P0062519 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062520.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186786 128454787 + MGP_WSBEiJ_P0062520 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062521.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186793 128428737 + MGP_WSBEiJ_P0062521 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062522.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186795 128456198 + MGP_WSBEiJ_P0062522 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062523.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186797 128370359 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062524.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186798 128450330 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062525.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186798 128420894 + MGP_WSBEiJ_P0062525 Camk2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062526.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186808 128452582 + MGP_WSBEiJ_P0062526 Camk2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062527.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186823 128453702 + Camk2d protein_coding processed_transcript MGP_WSBEiJ_T0062528.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186885 128453575 + MGP_WSBEiJ_P0062528 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062529.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128186994 128456167 + MGP_WSBEiJ_P0062529 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062530.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128187096 128453090 + MGP_WSBEiJ_P0062530 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062531.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128187129 128283998 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062532.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128187187 128453556 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062533.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128187202 128454199 + MGP_WSBEiJ_P0062533 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062534.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128380432 128392533 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062535.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128381004 128419665 + Camk2d protein_coding processed_transcript MGP_WSBEiJ_T0062536.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128391774 128417502 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062537.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128404121 128450129 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062538.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128407248 128453885 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062539.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128410742 128451420 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062540.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128410742 128451420 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062541.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128411965 128453046 + MGP_WSBEiJ_P0062541 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062542.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128413552 128415912 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0062543.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128414879 128452765 + MGP_WSBEiJ_P0062543 Camk2d protein_coding protein_coding MGP_WSBEiJ_T0062544.1 MGP_WSBEiJ_G0027094.1 mouse_genomes_project 3 128416179 128419265 + Camk2d protein_coding retained_intron MGP_WSBEiJ_T0017416.1 MGP_WSBEiJ_G0014946.1 mouse_genomes_project 3 125030036 125030888 - Snhg8 processed_transcript lincRNA MGP_WSBEiJ_T0017417.1 MGP_WSBEiJ_G0014946.1 mouse_genomes_project 3 125030039 125030814 - Snhg8 processed_transcript retained_intron MGP_WSBEiJ_T0017418.1 MGP_WSBEiJ_G0014946.1 mouse_genomes_project 3 125030041 125030817 - Snhg8 processed_transcript lincRNA MGP_WSBEiJ_T0060830.1 MGP_WSBEiJ_G0026685.1 mouse_genomes_project 3 88958392 88969108 + MGP_WSBEiJ_P0060830 Pmvk protein_coding protein_coding MGP_WSBEiJ_T0060831.1 MGP_WSBEiJ_G0026685.1 mouse_genomes_project 3 88958431 88969120 + MGP_WSBEiJ_P0060831 Pmvk protein_coding protein_coding MGP_WSBEiJ_T0060832.1 MGP_WSBEiJ_G0026685.1 mouse_genomes_project 3 88958632 88969110 + MGP_WSBEiJ_P0060832 Pmvk protein_coding protein_coding MGP_WSBEiJ_T0013769.1 MGP_WSBEiJ_G0011899.1 mouse_genomes_project 3 82839814 82840324 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007377.1 MGP_WSBEiJ_G0006048.1 mouse_genomes_project 3 31814675 31865879 - Gm38505 lincRNA lincRNA MGP_WSBEiJ_T0013848.1 MGP_WSBEiJ_G0011978.1 mouse_genomes_project 3 106602060 106609632 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098177.1 MGP_WSBEiJ_G0036840.1 mouse_genomes_project 3 85232197 85232261 - Gm27811 snRNA snRNA MGP_WSBEiJ_T0013545.1 MGP_WSBEiJ_G0011675.1 mouse_genomes_project 3 7944441 7945195 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097329.1 MGP_WSBEiJ_G0036003.1 mouse_genomes_project 3 89606315 89607745 + Gm16540 sense_intronic sense_intronic MGP_WSBEiJ_T0061156.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94719398 94767866 + MGP_WSBEiJ_P0061156 Pogz protein_coding protein_coding MGP_WSBEiJ_T0061157.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94719528 94744999 + Pogz protein_coding processed_transcript MGP_WSBEiJ_T0061158.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94719544 94749868 + Pogz protein_coding retained_intron MGP_WSBEiJ_T0061159.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94719544 94765873 + MGP_WSBEiJ_P0061159 Pogz protein_coding protein_coding MGP_WSBEiJ_T0061160.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94719544 94767864 + MGP_WSBEiJ_P0061160 Pogz protein_coding protein_coding MGP_WSBEiJ_T0061161.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94719544 94766416 + MGP_WSBEiJ_P0061161 Pogz protein_coding protein_coding MGP_WSBEiJ_T0061162.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94735907 94766428 + MGP_WSBEiJ_P0061162 Pogz protein_coding unknown_likely_coding MGP_WSBEiJ_T0061163.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94747147 94747970 + Pogz protein_coding retained_intron MGP_WSBEiJ_T0061164.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94747938 94757729 + MGP_WSBEiJ_P0061164 Pogz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061165.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94756735 94759160 + Pogz protein_coding processed_transcript MGP_WSBEiJ_T0061166.1 MGP_WSBEiJ_G0026794.1 mouse_genomes_project 3 94763191 94764507 + Pogz protein_coding retained_intron MGP_WSBEiJ_T0013541.1 MGP_WSBEiJ_G0011671.1 mouse_genomes_project 3 7152272 7152404 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004328.1 MGP_WSBEiJ_G0003775.1 mouse_genomes_project 3 155807143 155807779 + Gm16231 antisense antisense MGP_WSBEiJ_T0001174.1 MGP_WSBEiJ_G0001104.1 mouse_genomes_project 3 50322415 50325390 + TEC TEC MGP_WSBEiJ_T0060344.1 MGP_WSBEiJ_G0026597.1 mouse_genomes_project 3 85826260 85828730 - MGP_WSBEiJ_P0060344 Mab21l2 protein_coding protein_coding MGP_WSBEiJ_T0060345.1 MGP_WSBEiJ_G0026597.1 mouse_genomes_project 3 85826496 85829076 - Mab21l2 protein_coding processed_pseudogene MGP_WSBEiJ_T0060050.1 MGP_WSBEiJ_G0026526.1 mouse_genomes_project 3 66479424 66657057 + MGP_WSBEiJ_P0060050 Iqcj protein_coding protein_coding MGP_WSBEiJ_T0060052.1 MGP_WSBEiJ_G0026526.1 mouse_genomes_project 3 66479517 66664546 + MGP_WSBEiJ_P0060052 Iqcj protein_coding unknown_likely_coding MGP_WSBEiJ_T0062638.1 MGP_WSBEiJ_G0027109.1 mouse_genomes_project 3 131572328 131591917 - MGP_WSBEiJ_P0062638 Rrh protein_coding protein_coding MGP_WSBEiJ_T0062639.1 MGP_WSBEiJ_G0027109.1 mouse_genomes_project 3 131572329 131591917 - Rrh protein_coding processed_transcript MGP_WSBEiJ_T0062640.1 MGP_WSBEiJ_G0027109.1 mouse_genomes_project 3 131577834 131591929 - MGP_WSBEiJ_P0062640 Rrh protein_coding protein_coding MGP_WSBEiJ_T0062641.1 MGP_WSBEiJ_G0027109.1 mouse_genomes_project 3 131577837 131591915 - MGP_WSBEiJ_P0062641 Rrh protein_coding protein_coding MGP_WSBEiJ_T0062642.1 MGP_WSBEiJ_G0027109.1 mouse_genomes_project 3 131578063 131592011 - MGP_WSBEiJ_P0062642 Rrh protein_coding protein_coding MGP_WSBEiJ_T0062643.1 MGP_WSBEiJ_G0027109.1 mouse_genomes_project 3 131578171 131591886 - MGP_WSBEiJ_P0062643 Rrh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062644.1 MGP_WSBEiJ_G0027109.1 mouse_genomes_project 3 131583863 131591918 - Rrh protein_coding processed_transcript MGP_WSBEiJ_T0062645.1 MGP_WSBEiJ_G0027109.1 mouse_genomes_project 3 131588876 131591882 - Rrh protein_coding retained_intron MGP_WSBEiJ_T0063382.1 MGP_WSBEiJ_G0027245.1 mouse_genomes_project 3 160604829 160687246 + MGP_WSBEiJ_P0063382 Ptger3 protein_coding protein_coding MGP_WSBEiJ_T0063383.1 MGP_WSBEiJ_G0027245.1 mouse_genomes_project 3 160604837 160646350 + Ptger3 protein_coding retained_intron MGP_WSBEiJ_T0063384.1 MGP_WSBEiJ_G0027245.1 mouse_genomes_project 3 160604837 160686114 + MGP_WSBEiJ_P0063384 Ptger3 protein_coding protein_coding MGP_WSBEiJ_T0001187.1 MGP_WSBEiJ_G0001117.1 mouse_genomes_project 3 54324147 54327161 - TEC TEC MGP_WSBEiJ_T0001082.1 MGP_WSBEiJ_G0001014.1 mouse_genomes_project 3 15351641 15356471 + TEC TEC MGP_WSBEiJ_T0060387.1 MGP_WSBEiJ_G0026608.1 mouse_genomes_project 3 87067134 87079295 - MGP_WSBEiJ_P0060387 Lrrc71 protein_coding protein_coding MGP_WSBEiJ_T0060388.1 MGP_WSBEiJ_G0026608.1 mouse_genomes_project 3 87068106 87079297 - Lrrc71 protein_coding retained_intron MGP_WSBEiJ_T0060389.1 MGP_WSBEiJ_G0026608.1 mouse_genomes_project 3 87068157 87068784 - Lrrc71 protein_coding processed_transcript MGP_WSBEiJ_T0060390.1 MGP_WSBEiJ_G0026608.1 mouse_genomes_project 3 87069197 87071259 - MGP_WSBEiJ_P0060390 Lrrc71 protein_coding protein_coding MGP_WSBEiJ_T0060391.1 MGP_WSBEiJ_G0026608.1 mouse_genomes_project 3 87069292 87079136 - MGP_WSBEiJ_P0060391 Lrrc71 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060392.1 MGP_WSBEiJ_G0026608.1 mouse_genomes_project 3 87075956 87079266 - Lrrc71 protein_coding retained_intron MGP_WSBEiJ_T0007380.1 MGP_WSBEiJ_G0006051.1 mouse_genomes_project 3 32004214 32004991 - Gm29135 lincRNA lincRNA MGP_WSBEiJ_T0061634.1 MGP_WSBEiJ_G0026900.1 mouse_genomes_project 3 99566101 99645768 + MGP_WSBEiJ_P0061634 Tbx15 protein_coding protein_coding MGP_WSBEiJ_T0061635.1 MGP_WSBEiJ_G0026900.1 mouse_genomes_project 3 99581496 99687813 + MGP_WSBEiJ_P0061635 Tbx15 protein_coding protein_coding MGP_WSBEiJ_T0061636.1 MGP_WSBEiJ_G0026900.1 mouse_genomes_project 3 99629180 99648943 + MGP_WSBEiJ_P0061636 Tbx15 protein_coding protein_coding MGP_WSBEiJ_T0100754.1 MGP_WSBEiJ_G0039212.1 mouse_genomes_project 3 18691367 18693097 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0061464.1 MGP_WSBEiJ_G0026848.1 mouse_genomes_project 3 96216304 96218925 + MGP_WSBEiJ_P0061464 Hist2h2be protein_coding protein_coding MGP_WSBEiJ_T0098175.1 MGP_WSBEiJ_G0036838.1 mouse_genomes_project 3 85172642 85172749 - Gm26204 snRNA snRNA MGP_WSBEiJ_T0013556.1 MGP_WSBEiJ_G0011686.1 mouse_genomes_project 3 11294232 11294367 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098210.1 MGP_WSBEiJ_G0036873.1 mouse_genomes_project 3 121664207 121664313 - Gm23733 snRNA snRNA MGP_WSBEiJ_T0013685.1 MGP_WSBEiJ_G0011815.1 mouse_genomes_project 3 55556648 55557667 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059855.1 MGP_WSBEiJ_G0026476.1 mouse_genomes_project 3 56643713 56696531 + MGP_WSBEiJ_P0059855 Tsc22d2 protein_coding protein_coding MGP_WSBEiJ_T0059856.1 MGP_WSBEiJ_G0026476.1 mouse_genomes_project 3 56643718 56691468 + MGP_WSBEiJ_P0059856 Tsc22d2 protein_coding protein_coding MGP_WSBEiJ_T0059857.1 MGP_WSBEiJ_G0026476.1 mouse_genomes_project 3 56644876 56647898 + Tsc22d2 protein_coding retained_intron MGP_WSBEiJ_T0059858.1 MGP_WSBEiJ_G0026476.1 mouse_genomes_project 3 56646482 56690056 + MGP_WSBEiJ_P0059858 Tsc22d2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010350.1 MGP_WSBEiJ_G0008507.1 mouse_genomes_project 3 84717767 84717887 + Mir466k miRNA miRNA MGP_WSBEiJ_T0013803.1 MGP_WSBEiJ_G0011933.1 mouse_genomes_project 3 94258274 94260728 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007344.1 MGP_WSBEiJ_G0006025.1 mouse_genomes_project 3 10402730 10403868 + lincRNA lincRNA MGP_WSBEiJ_T0007345.1 MGP_WSBEiJ_G0006025.1 mouse_genomes_project 3 10402757 10403869 + lincRNA lincRNA MGP_WSBEiJ_T0007346.1 MGP_WSBEiJ_G0006025.1 mouse_genomes_project 3 10402803 10403656 + lincRNA lincRNA MGP_WSBEiJ_T0007348.1 MGP_WSBEiJ_G0006025.1 mouse_genomes_project 3 10402981 10405672 + lincRNA lincRNA MGP_WSBEiJ_T0013919.1 MGP_WSBEiJ_G0012049.1 mouse_genomes_project 3 133143671 133145014 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011337.1 MGP_WSBEiJ_G0009494.1 mouse_genomes_project 3 32183449 32183557 + Gm27611 misc_RNA misc_RNA MGP_WSBEiJ_T0007417.1 MGP_WSBEiJ_G0006078.1 mouse_genomes_project 3 46744513 46756932 - Gm37190 lincRNA lincRNA MGP_WSBEiJ_T0062891.1 MGP_WSBEiJ_G0027157.1 mouse_genomes_project 3 140104872 140121330 + MGP_WSBEiJ_P0062891 1110002E22Rik protein_coding protein_coding MGP_WSBEiJ_T0062892.1 MGP_WSBEiJ_G0027157.1 mouse_genomes_project 3 140111443 140117195 + 1110002E22Rik protein_coding processed_transcript MGP_WSBEiJ_T0013738.1 MGP_WSBEiJ_G0011868.1 mouse_genomes_project 3 70397582 70402912 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004189.1 MGP_WSBEiJ_G0003684.1 mouse_genomes_project 3 84558987 84573765 + 1700036G14Rik antisense antisense MGP_WSBEiJ_T0001308.1 MGP_WSBEiJ_G0001237.1 mouse_genomes_project 3 130952224 130954806 - TEC TEC MGP_WSBEiJ_T0062178.1 MGP_WSBEiJ_G0027025.1 mouse_genomes_project 3 109667180 109708083 - MGP_WSBEiJ_P0062178 Fndc7 protein_coding protein_coding MGP_WSBEiJ_T0062179.1 MGP_WSBEiJ_G0027025.1 mouse_genomes_project 3 109667185 109672111 - Fndc7 protein_coding processed_transcript MGP_WSBEiJ_T0062180.1 MGP_WSBEiJ_G0027025.1 mouse_genomes_project 3 109668824 109708385 - MGP_WSBEiJ_P0062180 Fndc7 protein_coding protein_coding MGP_WSBEiJ_T0062181.1 MGP_WSBEiJ_G0027025.1 mouse_genomes_project 3 109668841 109708192 - MGP_WSBEiJ_P0062181 Fndc7 protein_coding protein_coding MGP_WSBEiJ_T0062182.1 MGP_WSBEiJ_G0027025.1 mouse_genomes_project 3 109669589 109672107 - Fndc7 protein_coding processed_transcript MGP_WSBEiJ_T0062183.1 MGP_WSBEiJ_G0027025.1 mouse_genomes_project 3 109677387 109686547 - Fndc7 protein_coding processed_transcript MGP_WSBEiJ_T0062184.1 MGP_WSBEiJ_G0027025.1 mouse_genomes_project 3 109685288 109697752 - Fndc7 protein_coding retained_intron MGP_WSBEiJ_T0001191.1 MGP_WSBEiJ_G0001121.1 mouse_genomes_project 3 55860362 55861538 - TEC TEC MGP_WSBEiJ_T0099468.1 MGP_WSBEiJ_G0038131.1 mouse_genomes_project 3 116493505 116493637 + Gm22337 snoRNA snoRNA MGP_WSBEiJ_T0004327.1 MGP_WSBEiJ_G0003774.1 mouse_genomes_project 3 155784235 155785397 + Gm16213 antisense antisense MGP_WSBEiJ_T0001117.1 MGP_WSBEiJ_G0001049.1 mouse_genomes_project 3 34159168 34162268 - TEC TEC MGP_WSBEiJ_T0001324.1 MGP_WSBEiJ_G0001253.1 mouse_genomes_project 3 135473152 135482877 - TEC TEC MGP_WSBEiJ_T0007394.1 MGP_WSBEiJ_G0006063.1 mouse_genomes_project 3 35439719 35446005 + Gm42921 lincRNA lincRNA MGP_WSBEiJ_T0013583.1 MGP_WSBEiJ_G0011713.1 mouse_genomes_project 3 17925735 17927328 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010335.1 MGP_WSBEiJ_G0008492.1 mouse_genomes_project 3 28451619 28451682 + Mir7008 miRNA miRNA MGP_WSBEiJ_T0007575.1 MGP_WSBEiJ_G0006198.1 mouse_genomes_project 3 129531687 129535340 + Gm42586 lincRNA lincRNA MGP_WSBEiJ_T0096819.1 MGP_WSBEiJ_G0035500.1 mouse_genomes_project 3 156691183 156691265 + pseudogene pseudogene MGP_WSBEiJ_T0098145.1 MGP_WSBEiJ_G0036808.1 mouse_genomes_project 3 13857517 13857581 - Gm26485 snRNA snRNA MGP_WSBEiJ_T0099485.1 MGP_WSBEiJ_G0038148.1 mouse_genomes_project 3 156740428 156740551 + Gm25757 snoRNA snoRNA MGP_WSBEiJ_T0060418.1 MGP_WSBEiJ_G0026613.1 mouse_genomes_project 3 87196723 87230651 - MGP_WSBEiJ_P0060418 Prcc protein_coding protein_coding MGP_WSBEiJ_T0013923.1 MGP_WSBEiJ_G0012053.1 mouse_genomes_project 3 134872939 134873366 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098211.1 MGP_WSBEiJ_G0036874.1 mouse_genomes_project 3 123918165 123918321 + Gm25153 snRNA snRNA MGP_WSBEiJ_T0013736.1 MGP_WSBEiJ_G0011866.1 mouse_genomes_project 3 69102334 69102893 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061848.1 MGP_WSBEiJ_G0026943.1 mouse_genomes_project 3 104565104 104785580 - MGP_WSBEiJ_P0061848 Magi3 protein_coding protein_coding MGP_WSBEiJ_T0061849.1 MGP_WSBEiJ_G0026943.1 mouse_genomes_project 3 104565468 104785309 - MGP_WSBEiJ_P0061849 Magi3 protein_coding protein_coding MGP_WSBEiJ_T0061850.1 MGP_WSBEiJ_G0026943.1 mouse_genomes_project 3 104568310 104785444 - MGP_WSBEiJ_P0061850 Magi3 protein_coding protein_coding MGP_WSBEiJ_T0061851.1 MGP_WSBEiJ_G0026943.1 mouse_genomes_project 3 104615393 104617198 - Magi3 protein_coding retained_intron MGP_WSBEiJ_T0013842.1 MGP_WSBEiJ_G0011972.1 mouse_genomes_project 3 104229585 104229985 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098179.1 MGP_WSBEiJ_G0036842.1 mouse_genomes_project 3 85640531 85640700 + Gm23850 snRNA snRNA MGP_WSBEiJ_T0062463.1 MGP_WSBEiJ_G0027082.1 mouse_genomes_project 3 124499160 124530552 - MGP_WSBEiJ_P0062463 Myoz2 protein_coding protein_coding MGP_WSBEiJ_T0062464.1 MGP_WSBEiJ_G0027082.1 mouse_genomes_project 3 124499471 124530381 - MGP_WSBEiJ_P0062464 Myoz2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062465.1 MGP_WSBEiJ_G0027082.1 mouse_genomes_project 3 124499556 124530541 - Myoz2 protein_coding processed_transcript MGP_WSBEiJ_T0062466.1 MGP_WSBEiJ_G0027082.1 mouse_genomes_project 3 124508128 124530500 - Myoz2 protein_coding processed_transcript MGP_WSBEiJ_T0062467.1 MGP_WSBEiJ_G0027082.1 mouse_genomes_project 3 124517913 124530489 - Myoz2 protein_coding retained_intron MGP_WSBEiJ_T0097336.1 MGP_WSBEiJ_G0036010.1 mouse_genomes_project 3 99528154 99531615 + Gm42717 sense_intronic sense_intronic MGP_WSBEiJ_T0013723.1 MGP_WSBEiJ_G0011853.1 mouse_genomes_project 3 65153909 65154638 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011345.1 MGP_WSBEiJ_G0009502.1 mouse_genomes_project 3 88789188 88789440 + Gm22642 misc_RNA misc_RNA MGP_WSBEiJ_T0013910.1 MGP_WSBEiJ_G0012040.1 mouse_genomes_project 3 129352945 129353531 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060848.1 MGP_WSBEiJ_G0026690.1 mouse_genomes_project 3 89354284 89382063 + MGP_WSBEiJ_P0060848 She protein_coding protein_coding MGP_WSBEiJ_T0060849.1 MGP_WSBEiJ_G0026690.1 mouse_genomes_project 3 89360591 89362060 + She protein_coding retained_intron MGP_WSBEiJ_T0004208.1 MGP_WSBEiJ_G0003698.1 mouse_genomes_project 3 94171826 94181269 - Gm43306 antisense antisense MGP_WSBEiJ_T0062994.1 MGP_WSBEiJ_G0027179.1 mouse_genomes_project 3 144916114 144932092 + MGP_WSBEiJ_P0062994 Gbp2 protein_coding protein_coding MGP_WSBEiJ_T0004282.1 MGP_WSBEiJ_G0003742.1 mouse_genomes_project 3 124344264 124413992 - 4933405D12Rik antisense antisense MGP_WSBEiJ_T0004283.1 MGP_WSBEiJ_G0003742.1 mouse_genomes_project 3 124363656 124413992 - 4933405D12Rik antisense antisense MGP_WSBEiJ_T0060561.1 MGP_WSBEiJ_G0026642.1 mouse_genomes_project 3 87923840 87932832 + MGP_WSBEiJ_P0060561 Mex3a protein_coding protein_coding MGP_WSBEiJ_T0007499.1 MGP_WSBEiJ_G0006136.1 mouse_genomes_project 3 91809541 91811822 + Gm43736 lincRNA lincRNA MGP_WSBEiJ_T0004287.1 MGP_WSBEiJ_G0003746.1 mouse_genomes_project 3 128267166 128268888 - Gm15551 antisense antisense MGP_WSBEiJ_T0001294.1 MGP_WSBEiJ_G0001224.1 mouse_genomes_project 3 128620921 128623450 - TEC TEC MGP_WSBEiJ_T0001252.1 MGP_WSBEiJ_G0001182.1 mouse_genomes_project 3 109065881 109071090 + TEC TEC MGP_WSBEiJ_T0061545.1 MGP_WSBEiJ_G0026873.1 mouse_genomes_project 3 96987203 97172449 + MGP_WSBEiJ_P0061545 Gja5 protein_coding protein_coding MGP_WSBEiJ_T0061547.1 MGP_WSBEiJ_G0026873.1 mouse_genomes_project 3 97121692 97140085 + MGP_WSBEiJ_P0061547 Gja5 protein_coding protein_coding MGP_WSBEiJ_T0061548.1 MGP_WSBEiJ_G0026873.1 mouse_genomes_project 3 97121692 97142831 + MGP_WSBEiJ_P0061548 Gja5 protein_coding protein_coding MGP_WSBEiJ_T0001313.1 MGP_WSBEiJ_G0001242.1 mouse_genomes_project 3 132402181 132405018 + TEC TEC MGP_WSBEiJ_T0061063.1 MGP_WSBEiJ_G0026760.1 mouse_genomes_project 3 92540734 92542439 - MGP_WSBEiJ_P0061063 Lce1j protein_coding protein_coding MGP_WSBEiJ_T0061064.1 MGP_WSBEiJ_G0026760.1 mouse_genomes_project 3 92540944 92541394 - MGP_WSBEiJ_P0061064 Lce1j protein_coding protein_coding MGP_WSBEiJ_T0061571.1 MGP_WSBEiJ_G0026879.1 mouse_genomes_project 3 97770298 97796836 + MGP_WSBEiJ_P0061571 Fmo5 protein_coding protein_coding MGP_WSBEiJ_T0061572.1 MGP_WSBEiJ_G0026879.1 mouse_genomes_project 3 97770332 97794108 + MGP_WSBEiJ_P0061572 Fmo5 protein_coding protein_coding MGP_WSBEiJ_T0061573.1 MGP_WSBEiJ_G0026879.1 mouse_genomes_project 3 97770342 97771428 + Fmo5 protein_coding retained_intron MGP_WSBEiJ_T0061574.1 MGP_WSBEiJ_G0026879.1 mouse_genomes_project 3 97770351 97794158 + MGP_WSBEiJ_P0061574 Fmo5 protein_coding protein_coding MGP_WSBEiJ_T0061575.1 MGP_WSBEiJ_G0026879.1 mouse_genomes_project 3 97770377 97780545 + Fmo5 protein_coding processed_transcript MGP_WSBEiJ_T0061000.1 MGP_WSBEiJ_G0026715.1 mouse_genomes_project 3 90176730 90199248 + S100a3 protein_coding processed_transcript MGP_WSBEiJ_T0061001.1 MGP_WSBEiJ_G0026715.1 mouse_genomes_project 3 90198581 90218493 + MGP_WSBEiJ_P0061001 S100a3 protein_coding protein_coding MGP_WSBEiJ_T0061002.1 MGP_WSBEiJ_G0026715.1 mouse_genomes_project 3 90200874 90218539 + MGP_WSBEiJ_P0061002 S100a3 protein_coding protein_coding MGP_WSBEiJ_T0061004.1 MGP_WSBEiJ_G0026715.1 mouse_genomes_project 3 90216229 90218717 + MGP_WSBEiJ_P0061004 S100a3 protein_coding protein_coding MGP_WSBEiJ_T0061005.1 MGP_WSBEiJ_G0026715.1 mouse_genomes_project 3 90216259 90218717 + S100a3 protein_coding retained_intron MGP_WSBEiJ_T0100758.1 MGP_WSBEiJ_G0039216.1 mouse_genomes_project 3 57789941 57902735 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097368.1 MGP_WSBEiJ_G0036042.1 mouse_genomes_project 3 105083737 105086027 - A530041M06Rik sense_intronic sense_intronic MGP_WSBEiJ_T0007590.1 MGP_WSBEiJ_G0006211.1 mouse_genomes_project 3 134681639 134718917 - Gm29811 lincRNA lincRNA MGP_WSBEiJ_T0007530.1 MGP_WSBEiJ_G0006164.1 mouse_genomes_project 3 103192236 103193501 + Gm42682 lincRNA lincRNA MGP_WSBEiJ_T0063214.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065871 155092406 + MGP_WSBEiJ_P0063214 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063215.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065922 155076008 + MGP_WSBEiJ_P0063215 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063216.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065931 155088311 + MGP_WSBEiJ_P0063216 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063217.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065941 155080375 + MGP_WSBEiJ_P0063217 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063218.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065947 155088310 + MGP_WSBEiJ_P0063218 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063219.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065963 155075224 + MGP_WSBEiJ_P0063219 Fubp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063220.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065968 155088310 + MGP_WSBEiJ_P0063220 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063221.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065968 155091348 + MGP_WSBEiJ_P0063221 Fubp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063222.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155065970 155092406 + MGP_WSBEiJ_P0063222 Fubp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063223.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155072936 155074012 + Fubp1 protein_coding retained_intron MGP_WSBEiJ_T0063224.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155076871 155079644 + MGP_WSBEiJ_P0063224 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063225.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155077393 155078490 + Fubp1 protein_coding retained_intron MGP_WSBEiJ_T0063226.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155078807 155088311 + MGP_WSBEiJ_P0063226 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063227.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155078820 155088328 + MGP_WSBEiJ_P0063227 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063228.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155078830 155091414 + MGP_WSBEiJ_P0063228 Fubp1 protein_coding protein_coding MGP_WSBEiJ_T0063229.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155080236 155090962 + Fubp1 protein_coding retained_intron MGP_WSBEiJ_T0063230.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155081379 155083746 + Fubp1 protein_coding retained_intron MGP_WSBEiJ_T0063231.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155082813 155086838 + Fubp1 protein_coding retained_intron MGP_WSBEiJ_T0063232.1 MGP_WSBEiJ_G0027222.1 mouse_genomes_project 3 155083339 155088048 + Fubp1 protein_coding retained_intron MGP_WSBEiJ_T0100771.1 MGP_WSBEiJ_G0039229.1 mouse_genomes_project 3 80091243 80091711 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004230.1 MGP_WSBEiJ_G0003712.1 mouse_genomes_project 3 97085601 97087844 - 9230114J08Rik antisense antisense MGP_WSBEiJ_T0100787.1 MGP_WSBEiJ_G0039245.1 mouse_genomes_project 3 94080967 94081153 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097359.1 MGP_WSBEiJ_G0036033.1 mouse_genomes_project 3 104656617 104659050 - Gm42700 sense_intronic sense_intronic MGP_WSBEiJ_T0001273.1 MGP_WSBEiJ_G0001203.1 mouse_genomes_project 3 123190172 123191246 - TEC TEC MGP_WSBEiJ_T0100803.1 MGP_WSBEiJ_G0039261.1 mouse_genomes_project 3 114161175 114171105 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001351.1 MGP_WSBEiJ_G0001280.1 mouse_genomes_project 3 156361465 156362376 - TEC TEC MGP_WSBEiJ_T0010390.1 MGP_WSBEiJ_G0008547.1 mouse_genomes_project 3 142157844 142157966 + Mir7j miRNA miRNA MGP_WSBEiJ_T0001197.1 MGP_WSBEiJ_G0001127.1 mouse_genomes_project 3 58879983 58883977 + TEC TEC MGP_WSBEiJ_T0013864.1 MGP_WSBEiJ_G0011994.1 mouse_genomes_project 3 112020144 112020461 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062488.1 MGP_WSBEiJ_G0027086.1 mouse_genomes_project 3 124968665 125029082 + MGP_WSBEiJ_P0062488 Prss12 protein_coding protein_coding MGP_WSBEiJ_T0060004.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64534746 64546796 - Ccnl1 protein_coding retained_intron MGP_WSBEiJ_T0060005.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64534746 64546846 - MGP_WSBEiJ_P0060005 Ccnl1 protein_coding protein_coding MGP_WSBEiJ_T0060006.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64534790 64546629 - MGP_WSBEiJ_P0060006 Ccnl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060007.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64535104 64546760 - Ccnl1 protein_coding retained_intron MGP_WSBEiJ_T0060008.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64535377 64536592 - Ccnl1 protein_coding retained_intron MGP_WSBEiJ_T0060009.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64536547 64545453 - MGP_WSBEiJ_P0060009 Ccnl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060010.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64537101 64539571 - Ccnl1 protein_coding retained_intron MGP_WSBEiJ_T0060011.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64537485 64546778 - Ccnl1 protein_coding retained_intron MGP_WSBEiJ_T0060012.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64538494 64545486 - MGP_WSBEiJ_P0060012 Ccnl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060013.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64538999 64540462 - Ccnl1 protein_coding retained_intron MGP_WSBEiJ_T0060014.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64539841 64541586 - Ccnl1 protein_coding retained_intron MGP_WSBEiJ_T0060015.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64540026 64546250 - Ccnl1 protein_coding retained_intron MGP_WSBEiJ_T0060016.1 MGP_WSBEiJ_G0026516.1 mouse_genomes_project 3 64543839 64546725 - MGP_WSBEiJ_P0060016 Ccnl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0059693.1 MGP_WSBEiJ_G0026443.1 mouse_genomes_project 3 49703360 49815796 - MGP_WSBEiJ_P0059693 Maml3 protein_coding protein_coding MGP_WSBEiJ_T0059694.1 MGP_WSBEiJ_G0026443.1 mouse_genomes_project 3 49703360 50131797 - MGP_WSBEiJ_P0059694 Maml3 protein_coding protein_coding MGP_WSBEiJ_T0059695.1 MGP_WSBEiJ_G0026443.1 mouse_genomes_project 3 49813638 49815834 - Maml3 protein_coding retained_intron MGP_WSBEiJ_T0061034.1 MGP_WSBEiJ_G0026734.1 mouse_genomes_project 3 92086771 92088530 + MGP_WSBEiJ_P0061034 Sprr2d protein_coding protein_coding MGP_WSBEiJ_T0060276.1 MGP_WSBEiJ_G0026581.1 mouse_genomes_project 3 83269894 83336175 - MGP_WSBEiJ_P0060276 Mnd1 protein_coding protein_coding MGP_WSBEiJ_T0004128.1 MGP_WSBEiJ_G0003640.1 mouse_genomes_project 3 27388920 27426250 + Mecomos antisense antisense MGP_WSBEiJ_T0004129.1 MGP_WSBEiJ_G0003640.1 mouse_genomes_project 3 27394918 27400568 + Mecomos antisense antisense MGP_WSBEiJ_T0061934.1 MGP_WSBEiJ_G0026964.1 mouse_genomes_project 3 106616188 106630011 + MGP_WSBEiJ_P0061934 Ovgp1 protein_coding protein_coding MGP_WSBEiJ_T0061935.1 MGP_WSBEiJ_G0026964.1 mouse_genomes_project 3 106616560 106628682 + MGP_WSBEiJ_P0061935 Ovgp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061936.1 MGP_WSBEiJ_G0026964.1 mouse_genomes_project 3 106619742 106622650 + Ovgp1 protein_coding retained_intron MGP_WSBEiJ_T0061937.1 MGP_WSBEiJ_G0026964.1 mouse_genomes_project 3 106622625 106627378 + Ovgp1 protein_coding processed_transcript MGP_WSBEiJ_T0062451.1 MGP_WSBEiJ_G0027079.1 mouse_genomes_project 3 124380370 124384804 + MGP_WSBEiJ_P0062451 Fabp2 protein_coding protein_coding MGP_WSBEiJ_T0013830.1 MGP_WSBEiJ_G0011960.1 mouse_genomes_project 3 101648442 101648878 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013632.1 MGP_WSBEiJ_G0011762.1 mouse_genomes_project 3 38274307 38274607 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060122.1 MGP_WSBEiJ_G0026544.1 mouse_genomes_project 3 72452806 72535879 - MGP_WSBEiJ_P0060122 Bche protein_coding protein_coding MGP_WSBEiJ_T0060123.1 MGP_WSBEiJ_G0026544.1 mouse_genomes_project 3 72466614 72535706 - Bche protein_coding retained_intron MGP_WSBEiJ_T0060124.1 MGP_WSBEiJ_G0026544.1 mouse_genomes_project 3 72527591 72535731 - MGP_WSBEiJ_P0060124 Bche protein_coding protein_coding MGP_WSBEiJ_T0060125.1 MGP_WSBEiJ_G0026544.1 mouse_genomes_project 3 72531489 72535731 - Bche protein_coding processed_transcript MGP_WSBEiJ_T0060358.1 MGP_WSBEiJ_G0026600.1 mouse_genomes_project 3 86303614 86304893 - MGP_WSBEiJ_P0060358 protein_coding protein_coding MGP_WSBEiJ_T0013847.1 MGP_WSBEiJ_G0011977.1 mouse_genomes_project 3 105532364 105532619 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007579.1 MGP_WSBEiJ_G0006202.1 mouse_genomes_project 3 130786569 130789309 - Gm28543 lincRNA lincRNA MGP_WSBEiJ_T0013735.1 MGP_WSBEiJ_G0011865.1 mouse_genomes_project 3 68790451 68790731 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013903.1 MGP_WSBEiJ_G0012033.1 mouse_genomes_project 3 125287931 125288535 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013747.1 MGP_WSBEiJ_G0011877.1 mouse_genomes_project 3 73702468 73703093 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004321.1 MGP_WSBEiJ_G0003770.1 mouse_genomes_project 3 149206032 149215810 + Gm16325 antisense antisense MGP_WSBEiJ_T0004322.1 MGP_WSBEiJ_G0003770.1 mouse_genomes_project 3 149212703 149213607 + Gm16325 antisense antisense MGP_WSBEiJ_T0013816.1 MGP_WSBEiJ_G0011946.1 mouse_genomes_project 3 97226710 97227313 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062005.1 MGP_WSBEiJ_G0026986.1 mouse_genomes_project 3 108178560 108199805 - MGP_WSBEiJ_P0062005 Kcnc4 protein_coding protein_coding MGP_WSBEiJ_T0059429.1 MGP_WSBEiJ_G0026399.1 mouse_genomes_project 3 33796025 33849537 - MGP_WSBEiJ_P0059429 Qrfpr protein_coding protein_coding MGP_WSBEiJ_T0059430.1 MGP_WSBEiJ_G0026399.1 mouse_genomes_project 3 33804405 33849478 - Qrfpr protein_coding retained_intron MGP_WSBEiJ_T0099456.1 MGP_WSBEiJ_G0038119.1 mouse_genomes_project 3 95009649 95009734 - Gm24920 snoRNA snoRNA MGP_WSBEiJ_T0099429.1 MGP_WSBEiJ_G0038092.1 mouse_genomes_project 3 45119009 45119147 + Gm23891 snoRNA snoRNA MGP_WSBEiJ_T0062597.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129473806 129504904 - MGP_WSBEiJ_P0062597 Ap1ar protein_coding protein_coding MGP_WSBEiJ_T0062598.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129473811 129504892 - MGP_WSBEiJ_P0062598 Ap1ar protein_coding protein_coding MGP_WSBEiJ_T0062599.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129474066 129475696 - Ap1ar protein_coding retained_intron MGP_WSBEiJ_T0062600.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129478901 129479536 - Ap1ar protein_coding retained_intron MGP_WSBEiJ_T0062601.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129480074 129485589 - Ap1ar protein_coding retained_intron MGP_WSBEiJ_T0062602.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129483624 129485292 - Ap1ar protein_coding retained_intron MGP_WSBEiJ_T0062603.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129487600 129493435 - Ap1ar protein_coding retained_intron MGP_WSBEiJ_T0062604.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129488667 129504612 - Ap1ar protein_coding retained_intron MGP_WSBEiJ_T0062605.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129488668 129490556 - Ap1ar protein_coding retained_intron MGP_WSBEiJ_T0062606.1 MGP_WSBEiJ_G0027102.1 mouse_genomes_project 3 129488703 129504637 - MGP_WSBEiJ_P0062606 Ap1ar protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061687.1 MGP_WSBEiJ_G0026915.1 mouse_genomes_project 3 102314107 102378649 - MGP_WSBEiJ_P0061687 Slc22a15 protein_coding protein_coding MGP_WSBEiJ_T0061688.1 MGP_WSBEiJ_G0026915.1 mouse_genomes_project 3 102318291 102378705 - MGP_WSBEiJ_P0061688 Slc22a15 protein_coding protein_coding MGP_WSBEiJ_T0061689.1 MGP_WSBEiJ_G0026915.1 mouse_genomes_project 3 102318315 102349832 - Slc22a15 protein_coding processed_transcript MGP_WSBEiJ_T0061690.1 MGP_WSBEiJ_G0026915.1 mouse_genomes_project 3 102321859 102337251 - Slc22a15 protein_coding retained_intron MGP_WSBEiJ_T0061691.1 MGP_WSBEiJ_G0026915.1 mouse_genomes_project 3 102323097 102378635 - MGP_WSBEiJ_P0061691 Slc22a15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061692.1 MGP_WSBEiJ_G0026915.1 mouse_genomes_project 3 102331004 102335978 - Slc22a15 protein_coding retained_intron MGP_WSBEiJ_T0061693.1 MGP_WSBEiJ_G0026915.1 mouse_genomes_project 3 102375261 102378709 - Slc22a15 protein_coding processed_transcript MGP_WSBEiJ_T0099412.1 MGP_WSBEiJ_G0038075.1 mouse_genomes_project 3 1300522 1300655 - Gm22944 snoRNA snoRNA MGP_WSBEiJ_T0060381.1 MGP_WSBEiJ_G0026607.1 mouse_genomes_project 3 86939706 87026671 + Arhgef11 protein_coding retained_intron MGP_WSBEiJ_T0060382.1 MGP_WSBEiJ_G0026607.1 mouse_genomes_project 3 86939722 87068245 + MGP_WSBEiJ_P0060382 Arhgef11 protein_coding protein_coding MGP_WSBEiJ_T0060383.1 MGP_WSBEiJ_G0026607.1 mouse_genomes_project 3 86939732 87066121 + MGP_WSBEiJ_P0060383 Arhgef11 protein_coding protein_coding MGP_WSBEiJ_T0060384.1 MGP_WSBEiJ_G0026607.1 mouse_genomes_project 3 86939739 87047985 + Arhgef11 protein_coding retained_intron MGP_WSBEiJ_T0060385.1 MGP_WSBEiJ_G0026607.1 mouse_genomes_project 3 86939740 87067314 + MGP_WSBEiJ_P0060385 Arhgef11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060386.1 MGP_WSBEiJ_G0026607.1 mouse_genomes_project 3 86940248 87068246 + MGP_WSBEiJ_P0060386 Arhgef11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001096.1 MGP_WSBEiJ_G0001028.1 mouse_genomes_project 3 27655637 27657701 - TEC TEC MGP_WSBEiJ_T0007447.1 MGP_WSBEiJ_G0006101.1 mouse_genomes_project 3 66154403 66156661 - 4930402C01Rik lincRNA lincRNA MGP_WSBEiJ_T0060788.1 MGP_WSBEiJ_G0026676.1 mouse_genomes_project 3 88837399 88852432 - MGP_WSBEiJ_P0060788 Dcst1 protein_coding protein_coding MGP_WSBEiJ_T0060789.1 MGP_WSBEiJ_G0026676.1 mouse_genomes_project 3 88838203 88842727 - Dcst1 protein_coding retained_intron MGP_WSBEiJ_T0060790.1 MGP_WSBEiJ_G0026676.1 mouse_genomes_project 3 88839901 88842697 - Dcst1 protein_coding processed_transcript MGP_WSBEiJ_T0060791.1 MGP_WSBEiJ_G0026676.1 mouse_genomes_project 3 88840809 88842079 - Dcst1 protein_coding retained_intron MGP_WSBEiJ_T0060792.1 MGP_WSBEiJ_G0026676.1 mouse_genomes_project 3 88844688 88851441 - Dcst1 protein_coding retained_intron MGP_WSBEiJ_T0060793.1 MGP_WSBEiJ_G0026676.1 mouse_genomes_project 3 88844773 88851442 - Dcst1 protein_coding retained_intron MGP_WSBEiJ_T0061481.1 MGP_WSBEiJ_G0026858.1 mouse_genomes_project 3 96629905 96633186 - Polr3gl protein_coding retained_intron MGP_WSBEiJ_T0061482.1 MGP_WSBEiJ_G0026858.1 mouse_genomes_project 3 96629913 96631667 - Polr3gl protein_coding retained_intron MGP_WSBEiJ_T0061483.1 MGP_WSBEiJ_G0026858.1 mouse_genomes_project 3 96630013 96645728 - MGP_WSBEiJ_P0061483 Polr3gl protein_coding protein_coding MGP_WSBEiJ_T0013823.1 MGP_WSBEiJ_G0011953.1 mouse_genomes_project 3 99796123 99796357 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010378.1 MGP_WSBEiJ_G0008535.1 mouse_genomes_project 3 129187132 129187206 + Mir302b miRNA miRNA MGP_WSBEiJ_T0097332.1 MGP_WSBEiJ_G0036006.1 mouse_genomes_project 3 94349130 94350008 - Gm43774 sense_intronic sense_intronic MGP_WSBEiJ_T0007591.1 MGP_WSBEiJ_G0006212.1 mouse_genomes_project 3 135145947 135148440 - Gm43254 lincRNA lincRNA MGP_WSBEiJ_T0059974.1 MGP_WSBEiJ_G0026505.1 mouse_genomes_project 3 62360206 62378671 - MGP_WSBEiJ_P0059974 E130311K13Rik protein_coding protein_coding MGP_WSBEiJ_T0059975.1 MGP_WSBEiJ_G0026505.1 mouse_genomes_project 3 62371646 62378590 - E130311K13Rik protein_coding processed_transcript MGP_WSBEiJ_T0059976.1 MGP_WSBEiJ_G0026505.1 mouse_genomes_project 3 62376028 62378590 - E130311K13Rik protein_coding retained_intron MGP_WSBEiJ_T0004199.1 MGP_WSBEiJ_G0003692.1 mouse_genomes_project 3 88825004 88835012 + 4731419I09Rik antisense antisense MGP_WSBEiJ_T0063297.1 MGP_WSBEiJ_G0027231.1 mouse_genomes_project 3 156753210 156764284 + MGP_WSBEiJ_P0063297 Asb17 protein_coding protein_coding MGP_WSBEiJ_T0063298.1 MGP_WSBEiJ_G0027231.1 mouse_genomes_project 3 156753267 156762789 + MGP_WSBEiJ_P0063298 Asb17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001103.1 MGP_WSBEiJ_G0001035.1 mouse_genomes_project 3 29898740 29899783 + TEC TEC MGP_WSBEiJ_T0007556.1 MGP_WSBEiJ_G0006186.1 mouse_genomes_project 3 118469098 118469787 + Gm42891 lincRNA lincRNA MGP_WSBEiJ_T0001222.1 MGP_WSBEiJ_G0001152.1 mouse_genomes_project 3 84431329 84434132 - TEC TEC MGP_WSBEiJ_T0007509.1 MGP_WSBEiJ_G0006146.1 mouse_genomes_project 3 96356329 96365060 - lincRNA lincRNA MGP_WSBEiJ_T0097339.1 MGP_WSBEiJ_G0036013.1 mouse_genomes_project 3 100994738 100996859 - Gm42869 sense_intronic sense_intronic MGP_WSBEiJ_T0059035.1 MGP_WSBEiJ_G0026329.1 mouse_genomes_project 3 15095221 15098565 + MGP_WSBEiJ_P0059035 Bhlhe22 protein_coding protein_coding MGP_WSBEiJ_T0098192.1 MGP_WSBEiJ_G0036855.1 mouse_genomes_project 3 94808030 94808132 - Gm26279 snRNA snRNA MGP_WSBEiJ_T0013946.1 MGP_WSBEiJ_G0012076.1 mouse_genomes_project 3 140660618 140661393 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061612.1 MGP_WSBEiJ_G0026890.1 mouse_genomes_project 3 98615339 98659031 - MGP_WSBEiJ_P0061612 protein_coding protein_coding MGP_WSBEiJ_T0097173.1 MGP_WSBEiJ_G0035854.1 mouse_genomes_project 3 13151804 13152133 - Gm25863 ribozyme ribozyme MGP_WSBEiJ_T0098159.1 MGP_WSBEiJ_G0036822.1 mouse_genomes_project 3 53483834 53483941 + Gm25132 snRNA snRNA MGP_WSBEiJ_T0060167.1 MGP_WSBEiJ_G0026554.1 mouse_genomes_project 3 78491247 78611203 - MGP_WSBEiJ_P0060167 Fnip2 protein_coding protein_coding MGP_WSBEiJ_T0060168.1 MGP_WSBEiJ_G0026554.1 mouse_genomes_project 3 78493345 78502663 - Fnip2 protein_coding retained_intron MGP_WSBEiJ_T0060169.1 MGP_WSBEiJ_G0026554.1 mouse_genomes_project 3 78495752 78611089 - MGP_WSBEiJ_P0060169 Fnip2 protein_coding protein_coding MGP_WSBEiJ_T0060170.1 MGP_WSBEiJ_G0026554.1 mouse_genomes_project 3 78496051 78537698 - Fnip2 protein_coding retained_intron MGP_WSBEiJ_T0060171.1 MGP_WSBEiJ_G0026554.1 mouse_genomes_project 3 78541401 78554423 - Fnip2 protein_coding processed_transcript MGP_WSBEiJ_T0060172.1 MGP_WSBEiJ_G0026554.1 mouse_genomes_project 3 78544713 78611086 - Fnip2 protein_coding retained_intron MGP_WSBEiJ_T0001283.1 MGP_WSBEiJ_G0001213.1 mouse_genomes_project 3 126739934 126743984 - TEC TEC MGP_WSBEiJ_T0060200.1 MGP_WSBEiJ_G0026561.1 mouse_genomes_project 3 79752098 79876199 - MGP_WSBEiJ_P0060200 Gria2 protein_coding protein_coding MGP_WSBEiJ_T0060201.1 MGP_WSBEiJ_G0026561.1 mouse_genomes_project 3 79759527 79876199 - MGP_WSBEiJ_P0060201 Gria2 protein_coding protein_coding MGP_WSBEiJ_T0060202.1 MGP_WSBEiJ_G0026561.1 mouse_genomes_project 3 79759772 79875943 - MGP_WSBEiJ_P0060202 Gria2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060203.1 MGP_WSBEiJ_G0026561.1 mouse_genomes_project 3 79763938 79876155 - Gria2 protein_coding retained_intron MGP_WSBEiJ_T0060204.1 MGP_WSBEiJ_G0026561.1 mouse_genomes_project 3 79777145 79876014 - Gria2 protein_coding retained_intron MGP_WSBEiJ_T0060205.1 MGP_WSBEiJ_G0026561.1 mouse_genomes_project 3 79779076 79876088 - Gria2 protein_coding retained_intron MGP_WSBEiJ_T0060206.1 MGP_WSBEiJ_G0026561.1 mouse_genomes_project 3 79780316 79876144 - Gria2 protein_coding retained_intron MGP_WSBEiJ_T0060207.1 MGP_WSBEiJ_G0026561.1 mouse_genomes_project 3 79873415 79876057 - Gria2 protein_coding retained_intron MGP_WSBEiJ_T0011331.1 MGP_WSBEiJ_G0009488.1 mouse_genomes_project 3 10977452 10977733 - Gm22026 misc_RNA misc_RNA MGP_WSBEiJ_T0004162.1 MGP_WSBEiJ_G0003664.1 mouse_genomes_project 3 51520486 51526467 + Gm16206 antisense antisense MGP_WSBEiJ_T0060464.1 MGP_WSBEiJ_G0026624.1 mouse_genomes_project 3 87422322 87432687 - MGP_WSBEiJ_P0060464 Ttc24 protein_coding protein_coding MGP_WSBEiJ_T0060465.1 MGP_WSBEiJ_G0026624.1 mouse_genomes_project 3 87422725 87424983 - MGP_WSBEiJ_P0060465 Ttc24 protein_coding protein_coding MGP_WSBEiJ_T0098170.1 MGP_WSBEiJ_G0036833.1 mouse_genomes_project 3 64681526 64681679 - Gm26442 snRNA snRNA MGP_WSBEiJ_T0100778.1 MGP_WSBEiJ_G0039236.1 mouse_genomes_project 3 90071045 90072983 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007397.1 MGP_WSBEiJ_G0006066.1 mouse_genomes_project 3 35880464 35885415 - 5430434I15Rik lincRNA lincRNA MGP_WSBEiJ_T0013925.1 MGP_WSBEiJ_G0012055.1 mouse_genomes_project 3 136035755 136036196 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007379.1 MGP_WSBEiJ_G0006050.1 mouse_genomes_project 3 31947756 31955491 - Gm20515 lincRNA lincRNA MGP_WSBEiJ_T0061600.1 MGP_WSBEiJ_G0026885.1 mouse_genomes_project 3 98326202 98327644 + MGP_WSBEiJ_P0061600 Adam30 protein_coding protein_coding MGP_WSBEiJ_T0061601.1 MGP_WSBEiJ_G0026885.1 mouse_genomes_project 3 98326232 98329742 + MGP_WSBEiJ_P0061601 Adam30 protein_coding protein_coding MGP_WSBEiJ_T0013539.1 MGP_WSBEiJ_G0011669.1 mouse_genomes_project 3 6758095 6761103 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061826.1 MGP_WSBEiJ_G0026940.1 mouse_genomes_project 3 104396399 104457818 + MGP_WSBEiJ_P0061826 Ptpn22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061827.1 MGP_WSBEiJ_G0026940.1 mouse_genomes_project 3 104396536 104457831 + MGP_WSBEiJ_P0061827 Ptpn22 protein_coding unknown_likely_coding MGP_WSBEiJ_T0061828.1 MGP_WSBEiJ_G0026940.1 mouse_genomes_project 3 104397159 104414615 + Ptpn22 protein_coding processed_transcript MGP_WSBEiJ_T0061829.1 MGP_WSBEiJ_G0026940.1 mouse_genomes_project 3 104415916 104418267 + Ptpn22 protein_coding retained_intron MGP_WSBEiJ_T0061830.1 MGP_WSBEiJ_G0026940.1 mouse_genomes_project 3 104424361 104426546 + Ptpn22 protein_coding retained_intron MGP_WSBEiJ_T0061831.1 MGP_WSBEiJ_G0026940.1 mouse_genomes_project 3 104424451 104447759 + Ptpn22 protein_coding processed_transcript MGP_WSBEiJ_T0061832.1 MGP_WSBEiJ_G0026940.1 mouse_genomes_project 3 104428100 104455032 + Ptpn22 protein_coding retained_intron MGP_WSBEiJ_T0061833.1 MGP_WSBEiJ_G0026940.1 mouse_genomes_project 3 104446415 104457820 + Ptpn22 protein_coding retained_intron MGP_WSBEiJ_T0013877.1 MGP_WSBEiJ_G0012007.1 mouse_genomes_project 3 115912079 115912749 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004178.1 MGP_WSBEiJ_G0003676.1 mouse_genomes_project 3 64409504 64454423 - Gm37359 antisense antisense MGP_WSBEiJ_T0059909.1 MGP_WSBEiJ_G0026493.1 mouse_genomes_project 3 58318965 58340949 + MGP_WSBEiJ_P0059909 Aadacl2 protein_coding protein_coding MGP_WSBEiJ_T0004172.1 MGP_WSBEiJ_G0003672.1 mouse_genomes_project 3 60741071 60744080 - 9330121J05Rik antisense antisense MGP_WSBEiJ_T0004250.1 MGP_WSBEiJ_G0003725.1 mouse_genomes_project 3 106645353 106665204 + Gm42722 antisense antisense MGP_WSBEiJ_T0060115.1 MGP_WSBEiJ_G0026541.1 mouse_genomes_project 3 68685084 68707143 + MGP_WSBEiJ_P0060115 Otol1 protein_coding protein_coding MGP_WSBEiJ_T0001323.1 MGP_WSBEiJ_G0001252.1 mouse_genomes_project 3 134898196 134899893 - TEC TEC MGP_WSBEiJ_T0097340.1 MGP_WSBEiJ_G0036014.1 mouse_genomes_project 3 100997133 101000778 - Gm43462 sense_intronic sense_intronic MGP_WSBEiJ_T0062395.1 MGP_WSBEiJ_G0027070.1 mouse_genomes_project 3 123125643 123144257 + MGP_WSBEiJ_P0062395 F3 protein_coding protein_coding MGP_WSBEiJ_T0062396.1 MGP_WSBEiJ_G0027070.1 mouse_genomes_project 3 123125676 123131654 + F3 protein_coding processed_transcript MGP_WSBEiJ_T0062397.1 MGP_WSBEiJ_G0027070.1 mouse_genomes_project 3 123131441 123134384 + F3 protein_coding retained_intron MGP_WSBEiJ_T0062398.1 MGP_WSBEiJ_G0027070.1 mouse_genomes_project 3 123131665 123144257 + MGP_WSBEiJ_P0062398 F3 protein_coding protein_coding MGP_WSBEiJ_T0010389.1 MGP_WSBEiJ_G0008546.1 mouse_genomes_project 3 140602953 140603018 + Mir1956 miRNA miRNA MGP_WSBEiJ_T0060306.1 MGP_WSBEiJ_G0026587.1 mouse_genomes_project 3 83794670 83798130 + MGP_WSBEiJ_P0060306 Tigd4 protein_coding protein_coding MGP_WSBEiJ_T0004164.1 MGP_WSBEiJ_G0003666.1 mouse_genomes_project 3 53563021 53590231 - Gm42609 antisense antisense MGP_WSBEiJ_T0004165.1 MGP_WSBEiJ_G0003666.1 mouse_genomes_project 3 53565820 53588133 - Gm42609 antisense antisense MGP_WSBEiJ_T0097351.1 MGP_WSBEiJ_G0036025.1 mouse_genomes_project 3 103841495 103843645 + Gm43061 sense_intronic sense_intronic MGP_WSBEiJ_T0010353.1 MGP_WSBEiJ_G0008510.1 mouse_genomes_project 3 87577653 87577761 - Gm25641 miRNA miRNA MGP_WSBEiJ_T0060691.1 MGP_WSBEiJ_G0026662.1 mouse_genomes_project 3 88653631 88658924 + MGP_WSBEiJ_P0060691 Scamp3 protein_coding protein_coding MGP_WSBEiJ_T0060692.1 MGP_WSBEiJ_G0026662.1 mouse_genomes_project 3 88653648 88658924 + MGP_WSBEiJ_P0060692 Scamp3 protein_coding protein_coding MGP_WSBEiJ_T0060693.1 MGP_WSBEiJ_G0026662.1 mouse_genomes_project 3 88653654 88655824 + Scamp3 protein_coding retained_intron MGP_WSBEiJ_T0060694.1 MGP_WSBEiJ_G0026662.1 mouse_genomes_project 3 88653678 88658922 + MGP_WSBEiJ_P0060694 Scamp3 protein_coding protein_coding MGP_WSBEiJ_T0060695.1 MGP_WSBEiJ_G0026662.1 mouse_genomes_project 3 88653689 88655611 + Scamp3 protein_coding retained_intron MGP_WSBEiJ_T0060696.1 MGP_WSBEiJ_G0026662.1 mouse_genomes_project 3 88653695 88655823 + Scamp3 protein_coding retained_intron MGP_WSBEiJ_T0060697.1 MGP_WSBEiJ_G0026662.1 mouse_genomes_project 3 88653779 88657435 + Scamp3 protein_coding retained_intron MGP_WSBEiJ_T0060698.1 MGP_WSBEiJ_G0026662.1 mouse_genomes_project 3 88653916 88656544 + Scamp3 protein_coding retained_intron MGP_WSBEiJ_T0060393.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87078563 87102767 - MGP_WSBEiJ_P0060393 Pear1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060394.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87079767 87102772 - MGP_WSBEiJ_P0060394 Pear1 protein_coding protein_coding MGP_WSBEiJ_T0060395.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87079767 87161472 - MGP_WSBEiJ_P0060395 Pear1 protein_coding protein_coding MGP_WSBEiJ_T0060396.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87079767 87161421 - MGP_WSBEiJ_P0060396 Pear1 protein_coding protein_coding MGP_WSBEiJ_T0060397.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87079768 87095230 - Pear1 protein_coding retained_intron MGP_WSBEiJ_T0060398.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87079768 87102768 - MGP_WSBEiJ_P0060398 Pear1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060399.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87079768 87102762 - MGP_WSBEiJ_P0060399 Pear1 protein_coding protein_coding MGP_WSBEiJ_T0060400.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87079776 87085010 - Pear1 protein_coding retained_intron MGP_WSBEiJ_T0060401.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87080570 87102762 - MGP_WSBEiJ_P0060401 Pear1 protein_coding protein_coding MGP_WSBEiJ_T0060402.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87082133 87084639 - MGP_WSBEiJ_P0060402 Pear1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060403.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87083114 87088194 - MGP_WSBEiJ_P0060403 Pear1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060404.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87087892 87102762 - MGP_WSBEiJ_P0060404 Pear1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060405.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87089235 87102774 - Pear1 protein_coding retained_intron MGP_WSBEiJ_T0060406.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87089675 87102762 - MGP_WSBEiJ_P0060406 Pear1 protein_coding protein_coding MGP_WSBEiJ_T0060407.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87089688 87102762 - MGP_WSBEiJ_P0060407 Pear1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060408.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87089702 87102785 - MGP_WSBEiJ_P0060408 Pear1 protein_coding protein_coding MGP_WSBEiJ_T0060409.1 MGP_WSBEiJ_G0026609.1 mouse_genomes_project 3 87090418 87102754 - MGP_WSBEiJ_P0060409 Pear1 protein_coding protein_coding MGP_WSBEiJ_T0061613.1 MGP_WSBEiJ_G0026891.1 mouse_genomes_project 3 98861179 98874595 - MGP_WSBEiJ_P0061613 Hsd3b5 protein_coding protein_coding MGP_WSBEiJ_T0058951.1 MGP_WSBEiJ_G0026298.1 mouse_genomes_project 3 6082763 6119586 + MGP_WSBEiJ_P0058951 Zbtb10 protein_coding protein_coding MGP_WSBEiJ_T0010359.1 MGP_WSBEiJ_G0008516.1 mouse_genomes_project 3 89620804 89620884 + Mir190b miRNA miRNA MGP_WSBEiJ_T0001297.1 MGP_WSBEiJ_G0001227.1 mouse_genomes_project 3 128799119 128802833 - TEC TEC MGP_WSBEiJ_T0060069.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67524375 67654327 - Ift80 protein_coding retained_intron MGP_WSBEiJ_T0060070.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67524375 67654311 - MGP_WSBEiJ_P0060070 Ift80 protein_coding protein_coding MGP_WSBEiJ_T0060071.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67524401 67654338 - MGP_WSBEiJ_P0060071 Ift80 protein_coding protein_coding MGP_WSBEiJ_T0060072.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67524401 67643019 - MGP_WSBEiJ_P0060072 Ift80 protein_coding protein_coding MGP_WSBEiJ_T0060073.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67525522 67547553 - Ift80 protein_coding retained_intron MGP_WSBEiJ_T0060074.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67542706 67543056 - Ift80 protein_coding retained_intron MGP_WSBEiJ_T0060075.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67545385 67654266 - Ift80 protein_coding retained_intron MGP_WSBEiJ_T0060076.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67565328 67616539 - Ift80 protein_coding processed_transcript MGP_WSBEiJ_T0060077.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67605224 67654245 - MGP_WSBEiJ_P0060077 Ift80 protein_coding protein_coding MGP_WSBEiJ_T0060078.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67610727 67654252 - MGP_WSBEiJ_P0060078 Ift80 protein_coding protein_coding MGP_WSBEiJ_T0060079.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67616097 67654156 - Ift80 protein_coding processed_transcript MGP_WSBEiJ_T0060080.1 MGP_WSBEiJ_G0026532.1 mouse_genomes_project 3 67652062 67654293 - Ift80 protein_coding retained_intron MGP_WSBEiJ_T0013809.1 MGP_WSBEiJ_G0011939.1 mouse_genomes_project 3 95745311 95745458 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060756.1 MGP_WSBEiJ_G0026670.1 mouse_genomes_project 3 88741004 88751661 + MGP_WSBEiJ_P0060756 Dpm3 protein_coding protein_coding MGP_WSBEiJ_T0060757.1 MGP_WSBEiJ_G0026670.1 mouse_genomes_project 3 88751135 88751661 + MGP_WSBEiJ_P0060757 Dpm3 protein_coding protein_coding MGP_WSBEiJ_T0060758.1 MGP_WSBEiJ_G0026670.1 mouse_genomes_project 3 88751222 88751663 + Dpm3 protein_coding retained_intron MGP_WSBEiJ_T0007448.1 MGP_WSBEiJ_G0006102.1 mouse_genomes_project 3 67367786 67369266 - 4930535E02Rik lincRNA lincRNA MGP_WSBEiJ_T0063329.1 MGP_WSBEiJ_G0027235.1 mouse_genomes_project 3 156897482 157199682 + MGP_WSBEiJ_P0063329 Slc44a5 protein_coding protein_coding MGP_WSBEiJ_T0063330.1 MGP_WSBEiJ_G0027235.1 mouse_genomes_project 3 157052720 157196991 + MGP_WSBEiJ_P0063330 Slc44a5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0063331.1 MGP_WSBEiJ_G0027235.1 mouse_genomes_project 3 157149878 157152922 + Slc44a5 protein_coding processed_transcript MGP_WSBEiJ_T0063332.1 MGP_WSBEiJ_G0027235.1 mouse_genomes_project 3 157185501 157199682 + Slc44a5 protein_coding retained_intron MGP_WSBEiJ_T0013683.1 MGP_WSBEiJ_G0011813.1 mouse_genomes_project 3 55450420 55450673 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061425.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95912054 95929077 + MGP_WSBEiJ_P0061425 Anp32e protein_coding protein_coding MGP_WSBEiJ_T0061426.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95912059 95929147 + MGP_WSBEiJ_P0061426 Anp32e protein_coding protein_coding MGP_WSBEiJ_T0061427.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95912101 95928954 + MGP_WSBEiJ_P0061427 Anp32e protein_coding protein_coding MGP_WSBEiJ_T0061428.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95912162 95930781 + MGP_WSBEiJ_P0061428 Anp32e protein_coding protein_coding MGP_WSBEiJ_T0061429.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95912317 95929059 + MGP_WSBEiJ_P0061429 Anp32e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061430.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95912358 95928830 + MGP_WSBEiJ_P0061430 Anp32e protein_coding protein_coding MGP_WSBEiJ_T0061431.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95912373 95930903 + MGP_WSBEiJ_P0061431 Anp32e protein_coding protein_coding MGP_WSBEiJ_T0061432.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95913312 95920720 + MGP_WSBEiJ_P0061432 Anp32e protein_coding protein_coding MGP_WSBEiJ_T0061433.1 MGP_WSBEiJ_G0026837.1 mouse_genomes_project 3 95927733 95929035 + Anp32e protein_coding retained_intron MGP_WSBEiJ_T0097379.1 MGP_WSBEiJ_G0036053.1 mouse_genomes_project 3 106424557 106426246 - Gm43331 sense_intronic sense_intronic MGP_WSBEiJ_T0013700.1 MGP_WSBEiJ_G0011830.1 mouse_genomes_project 3 58335865 58336380 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061799.1 MGP_WSBEiJ_G0026935.1 mouse_genomes_project 3 104269260 104321616 - MGP_WSBEiJ_P0061799 Hipk1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0061800.1 MGP_WSBEiJ_G0026935.1 mouse_genomes_project 3 104269265 104322078 - MGP_WSBEiJ_P0061800 Hipk1 protein_coding protein_coding MGP_WSBEiJ_T0061801.1 MGP_WSBEiJ_G0026935.1 mouse_genomes_project 3 104272956 104321572 - MGP_WSBEiJ_P0061801 Hipk1 protein_coding protein_coding MGP_WSBEiJ_T0061802.1 MGP_WSBEiJ_G0026935.1 mouse_genomes_project 3 104273054 104321771 - MGP_WSBEiJ_P0061802 Hipk1 protein_coding protein_coding MGP_WSBEiJ_T0061803.1 MGP_WSBEiJ_G0026935.1 mouse_genomes_project 3 104274550 104322076 - MGP_WSBEiJ_P0061803 Hipk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061804.1 MGP_WSBEiJ_G0026935.1 mouse_genomes_project 3 104277509 104280455 - Hipk1 protein_coding retained_intron MGP_WSBEiJ_T0061805.1 MGP_WSBEiJ_G0026935.1 mouse_genomes_project 3 104278758 104280404 - Hipk1 protein_coding retained_intron MGP_WSBEiJ_T0061806.1 MGP_WSBEiJ_G0026935.1 mouse_genomes_project 3 104283547 104321790 - Hipk1 protein_coding retained_intron MGP_WSBEiJ_T0010387.1 MGP_WSBEiJ_G0008544.1 mouse_genomes_project 3 138771098 138771215 - Gm44327 miRNA miRNA MGP_WSBEiJ_T0013977.1 MGP_WSBEiJ_G0012107.1 mouse_genomes_project 3 154917442 154917998 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059591.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39214586 39280912 + MGP_WSBEiJ_P0059591 Jade1 protein_coding protein_coding MGP_WSBEiJ_T0059592.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39214596 39256033 + MGP_WSBEiJ_P0059592 Jade1 protein_coding protein_coding MGP_WSBEiJ_T0059593.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39214615 39258872 + MGP_WSBEiJ_P0059593 Jade1 protein_coding protein_coding MGP_WSBEiJ_T0059594.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39223897 39280906 + MGP_WSBEiJ_P0059594 Jade1 protein_coding protein_coding MGP_WSBEiJ_T0059595.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39223939 39253986 + Jade1 protein_coding processed_transcript MGP_WSBEiJ_T0059596.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39224135 39278103 + MGP_WSBEiJ_P0059596 Jade1 protein_coding protein_coding MGP_WSBEiJ_T0059597.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39227131 39280156 + MGP_WSBEiJ_P0059597 Jade1 protein_coding protein_coding MGP_WSBEiJ_T0059598.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39227175 39253984 + Jade1 protein_coding processed_transcript MGP_WSBEiJ_T0059599.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39227197 39270737 + MGP_WSBEiJ_P0059599 Jade1 protein_coding protein_coding MGP_WSBEiJ_T0059600.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39243139 39251255 + Jade1 protein_coding retained_intron MGP_WSBEiJ_T0059601.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39253924 39262423 + Jade1 protein_coding retained_intron MGP_WSBEiJ_T0059602.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39256024 39268606 + Jade1 protein_coding retained_intron MGP_WSBEiJ_T0059603.1 MGP_WSBEiJ_G0026428.1 mouse_genomes_project 3 39258918 39268842 + MGP_WSBEiJ_P0059603 Jade1 protein_coding protein_coding MGP_WSBEiJ_T0061071.1 MGP_WSBEiJ_G0026767.1 mouse_genomes_project 3 92713997 92724679 + MGP_WSBEiJ_P0061071 protein_coding protein_coding MGP_WSBEiJ_T0007388.1 MGP_WSBEiJ_G0006058.1 mouse_genomes_project 3 33891992 33894327 - Gm43204 lincRNA lincRNA MGP_WSBEiJ_T0060922.1 MGP_WSBEiJ_G0026698.1 mouse_genomes_project 3 89784367 89785582 - MGP_WSBEiJ_P0060922 protein_coding protein_coding MGP_WSBEiJ_T0061503.1 MGP_WSBEiJ_G0026865.1 mouse_genomes_project 3 96731468 96755959 + MGP_WSBEiJ_P0061503 protein_coding unknown_likely_coding MGP_WSBEiJ_T0061504.1 MGP_WSBEiJ_G0026865.1 mouse_genomes_project 3 96731716 96755929 + MGP_WSBEiJ_P0061504 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061505.1 MGP_WSBEiJ_G0026865.1 mouse_genomes_project 3 96743770 96746902 + protein_coding processed_transcript MGP_WSBEiJ_T0061473.1 MGP_WSBEiJ_G0026855.1 mouse_genomes_project 3 96565897 96569914 + MGP_WSBEiJ_P0061473 Hfe2 protein_coding protein_coding MGP_WSBEiJ_T0099451.1 MGP_WSBEiJ_G0038114.1 mouse_genomes_project 3 86907576 86907696 - Gm25167 snoRNA snoRNA MGP_WSBEiJ_T0061234.1 MGP_WSBEiJ_G0026804.1 mouse_genomes_project 3 95045709 95048821 + MGP_WSBEiJ_P0061234 Tmod4 protein_coding protein_coding MGP_WSBEiJ_T0061235.1 MGP_WSBEiJ_G0026804.1 mouse_genomes_project 3 95045747 95050397 + MGP_WSBEiJ_P0061235 Tmod4 protein_coding protein_coding MGP_WSBEiJ_T0061236.1 MGP_WSBEiJ_G0026804.1 mouse_genomes_project 3 95045748 95050393 + MGP_WSBEiJ_P0061236 Tmod4 protein_coding protein_coding MGP_WSBEiJ_T0061237.1 MGP_WSBEiJ_G0026804.1 mouse_genomes_project 3 95047437 95049932 + Tmod4 protein_coding retained_intron MGP_WSBEiJ_T0061238.1 MGP_WSBEiJ_G0026804.1 mouse_genomes_project 3 95048337 95049034 + Tmod4 protein_coding processed_transcript MGP_WSBEiJ_T0061239.1 MGP_WSBEiJ_G0026804.1 mouse_genomes_project 3 95048820 95050396 + Tmod4 protein_coding retained_intron MGP_WSBEiJ_T0013931.1 MGP_WSBEiJ_G0012061.1 mouse_genomes_project 3 136996465 136997054 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013948.1 MGP_WSBEiJ_G0012078.1 mouse_genomes_project 3 140731745 140731934 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060480.1 MGP_WSBEiJ_G0026627.1 mouse_genomes_project 3 87604865 87616699 - MGP_WSBEiJ_P0060480 Rhbg protein_coding protein_coding MGP_WSBEiJ_T0007604.1 MGP_WSBEiJ_G0006224.1 mouse_genomes_project 3 139692053 139702015 + Gm42610 lincRNA lincRNA MGP_WSBEiJ_T0001264.1 MGP_WSBEiJ_G0001194.1 mouse_genomes_project 3 120158662 120160896 + TEC TEC MGP_WSBEiJ_T0013865.1 MGP_WSBEiJ_G0011995.1 mouse_genomes_project 3 112244542 112246070 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059535.1 MGP_WSBEiJ_G0026418.1 mouse_genomes_project 3 36575597 36705806 + MGP_WSBEiJ_P0059535 Fat4 protein_coding protein_coding MGP_WSBEiJ_T0059536.1 MGP_WSBEiJ_G0026418.1 mouse_genomes_project 3 36579599 36642062 + Fat4 protein_coding retained_intron MGP_WSBEiJ_T0013986.1 MGP_WSBEiJ_G0012116.1 mouse_genomes_project 3 160922929 160923339 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013555.1 MGP_WSBEiJ_G0011685.1 mouse_genomes_project 3 10791701 10793058 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007401.1 MGP_WSBEiJ_G0006069.1 mouse_genomes_project 3 36309522 36310830 + Gm43538 lincRNA lincRNA MGP_WSBEiJ_T0097326.1 MGP_WSBEiJ_G0036001.1 mouse_genomes_project 3 78721557 78725069 - Gm26984 sense_intronic sense_intronic MGP_WSBEiJ_T0007514.1 MGP_WSBEiJ_G0006150.1 mouse_genomes_project 3 96421122 96421690 + Gm26654 lincRNA lincRNA MGP_WSBEiJ_T0060104.1 MGP_WSBEiJ_G0026538.1 mouse_genomes_project 3 68241115 68266319 - MGP_WSBEiJ_P0060104 B3galnt1 protein_coding protein_coding MGP_WSBEiJ_T0061097.1 MGP_WSBEiJ_G0026782.1 mouse_genomes_project 3 94144587 94149838 + MGP_WSBEiJ_P0061097 Them5 protein_coding protein_coding MGP_WSBEiJ_T0061098.1 MGP_WSBEiJ_G0026782.1 mouse_genomes_project 3 94144747 94149836 + MGP_WSBEiJ_P0061098 Them5 protein_coding protein_coding MGP_WSBEiJ_T0010346.1 MGP_WSBEiJ_G0008503.1 mouse_genomes_project 3 67659344 67659408 + Mir15b miRNA miRNA MGP_WSBEiJ_T0099479.1 MGP_WSBEiJ_G0038142.1 mouse_genomes_project 3 135438069 135438201 - Gm23011 snoRNA snoRNA MGP_WSBEiJ_T0001231.1 MGP_WSBEiJ_G0001161.1 mouse_genomes_project 3 95293678 95295418 + TEC TEC MGP_WSBEiJ_T0098185.1 MGP_WSBEiJ_G0036848.1 mouse_genomes_project 3 88677772 88677879 - Gm23269 snRNA snRNA MGP_WSBEiJ_T0061468.1 MGP_WSBEiJ_G0026852.1 mouse_genomes_project 3 96268295 96268676 + MGP_WSBEiJ_P0061468 Hist2h2bb protein_coding protein_coding MGP_WSBEiJ_T0007634.1 MGP_WSBEiJ_G0006250.1 mouse_genomes_project 3 146683128 146684663 + Gm43447 lincRNA lincRNA MGP_WSBEiJ_T0097371.1 MGP_WSBEiJ_G0036045.1 mouse_genomes_project 3 105232290 105233697 + Gm43585 sense_intronic sense_intronic MGP_WSBEiJ_T0010382.1 MGP_WSBEiJ_G0008539.1 mouse_genomes_project 3 129187637 129187712 + Mir367 miRNA miRNA MGP_WSBEiJ_T0004168.1 MGP_WSBEiJ_G0003668.1 mouse_genomes_project 3 57265315 57269031 - Gm43570 antisense antisense MGP_WSBEiJ_T0059902.1 MGP_WSBEiJ_G0026489.1 mouse_genomes_project 3 57594350 57623179 - MGP_WSBEiJ_P0059902 Igsf10 protein_coding protein_coding MGP_WSBEiJ_T0059903.1 MGP_WSBEiJ_G0026489.1 mouse_genomes_project 3 57595540 57623082 - MGP_WSBEiJ_P0059903 Igsf10 protein_coding protein_coding MGP_WSBEiJ_T0059904.1 MGP_WSBEiJ_G0026489.1 mouse_genomes_project 3 57595540 57623317 - MGP_WSBEiJ_P0059904 Igsf10 protein_coding protein_coding MGP_WSBEiJ_T0059905.1 MGP_WSBEiJ_G0026489.1 mouse_genomes_project 3 57618666 57623179 - MGP_WSBEiJ_P0059905 Igsf10 protein_coding protein_coding MGP_WSBEiJ_T0001316.1 MGP_WSBEiJ_G0001245.1 mouse_genomes_project 3 132723321 132724700 + TEC TEC MGP_WSBEiJ_T0061389.1 MGP_WSBEiJ_G0026830.1 mouse_genomes_project 3 95724679 95786175 - MGP_WSBEiJ_P0061389 Rprd2 protein_coding protein_coding MGP_WSBEiJ_T0061390.1 MGP_WSBEiJ_G0026830.1 mouse_genomes_project 3 95725141 95786182 - MGP_WSBEiJ_P0061390 Rprd2 protein_coding protein_coding MGP_WSBEiJ_T0061391.1 MGP_WSBEiJ_G0026830.1 mouse_genomes_project 3 95735317 95741518 - Rprd2 protein_coding retained_intron MGP_WSBEiJ_T0061392.1 MGP_WSBEiJ_G0026830.1 mouse_genomes_project 3 95737015 95786202 - MGP_WSBEiJ_P0061392 Rprd2 protein_coding protein_coding MGP_WSBEiJ_T0061393.1 MGP_WSBEiJ_G0026830.1 mouse_genomes_project 3 95737830 95741496 - Rprd2 protein_coding processed_transcript MGP_WSBEiJ_T0061394.1 MGP_WSBEiJ_G0026830.1 mouse_genomes_project 3 95748603 95786281 - Rprd2 protein_coding retained_intron MGP_WSBEiJ_T0061250.1 MGP_WSBEiJ_G0026808.1 mouse_genomes_project 3 95060971 95063813 - MGP_WSBEiJ_P0061250 Tnfaip8l2 protein_coding protein_coding MGP_WSBEiJ_T0062516.1 MGP_WSBEiJ_G0027093.1 mouse_genomes_project 3 127939854 128020660 + MGP_WSBEiJ_P0062516 Arsj protein_coding protein_coding MGP_WSBEiJ_T0001118.1 MGP_WSBEiJ_G0001050.1 mouse_genomes_project 3 34898569 34899039 + TEC TEC MGP_WSBEiJ_T0004290.1 MGP_WSBEiJ_G0003748.1 mouse_genomes_project 3 129200880 129202214 - Gm43729 antisense antisense MGP_WSBEiJ_T0013664.1 MGP_WSBEiJ_G0011794.1 mouse_genomes_project 3 47620433 47620664 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001367.1 MGP_WSBEiJ_G0001296.1 mouse_genomes_project 3 161528455 161529480 + TEC TEC MGP_WSBEiJ_T0062762.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135306380 135392055 - MGP_WSBEiJ_P0062762 Tet2 protein_coding protein_coding MGP_WSBEiJ_T0062763.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135306384 135320323 - Tet2 protein_coding retained_intron MGP_WSBEiJ_T0062764.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135309608 135392033 - MGP_WSBEiJ_P0062764 Tet2 protein_coding protein_coding MGP_WSBEiJ_T0062765.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135310259 135316230 - Tet2 protein_coding retained_intron MGP_WSBEiJ_T0062766.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135311939 135322044 - MGP_WSBEiJ_P0062766 Tet2 protein_coding protein_coding MGP_WSBEiJ_T0062767.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135320548 135324400 - Tet2 protein_coding retained_intron MGP_WSBEiJ_T0062768.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135324529 135326152 - Tet2 protein_coding retained_intron MGP_WSBEiJ_T0062769.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135334950 135392804 - MGP_WSBEiJ_P0062769 Tet2 protein_coding protein_coding MGP_WSBEiJ_T0062770.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135360414 135391967 - Tet2 protein_coding retained_intron MGP_WSBEiJ_T0062771.1 MGP_WSBEiJ_G0027134.1 mouse_genomes_project 3 135386438 135391951 - Tet2 protein_coding processed_transcript MGP_WSBEiJ_T0062120.1 MGP_WSBEiJ_G0027014.1 mouse_genomes_project 3 109181518 109206223 - MGP_WSBEiJ_P0062120 Celsr2 protein_coding protein_coding MGP_WSBEiJ_T0062121.1 MGP_WSBEiJ_G0027014.1 mouse_genomes_project 3 109182889 109189618 - MGP_WSBEiJ_P0062121 Celsr2 protein_coding protein_coding MGP_WSBEiJ_T0062122.1 MGP_WSBEiJ_G0027014.1 mouse_genomes_project 3 109183046 109184100 - Celsr2 protein_coding processed_transcript MGP_WSBEiJ_T0062123.1 MGP_WSBEiJ_G0027014.1 mouse_genomes_project 3 109183266 109184191 - Celsr2 protein_coding retained_intron MGP_WSBEiJ_T0062124.1 MGP_WSBEiJ_G0027014.1 mouse_genomes_project 3 109184201 109184969 - Celsr2 protein_coding retained_intron MGP_WSBEiJ_T0062125.1 MGP_WSBEiJ_G0027014.1 mouse_genomes_project 3 109186226 109187160 - Celsr2 protein_coding retained_intron MGP_WSBEiJ_T0062126.1 MGP_WSBEiJ_G0027014.1 mouse_genomes_project 3 109191926 109193256 - Celsr2 protein_coding retained_intron MGP_WSBEiJ_T0061454.1 MGP_WSBEiJ_G0026842.1 mouse_genomes_project 3 96166317 96167117 + protein_coding retained_intron MGP_WSBEiJ_T0011347.1 MGP_WSBEiJ_G0009504.1 mouse_genomes_project 3 101119389 101119651 - Gm23465 misc_RNA misc_RNA MGP_WSBEiJ_T0007476.1 MGP_WSBEiJ_G0006125.1 mouse_genomes_project 3 82696590 82718529 - 1700028M03Rik lincRNA lincRNA MGP_WSBEiJ_T0059840.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940774 56045968 + MGP_WSBEiJ_P0059840 Rnf13 protein_coding protein_coding MGP_WSBEiJ_T0059841.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940775 55987425 + MGP_WSBEiJ_P0059841 Rnf13 protein_coding protein_coding MGP_WSBEiJ_T0059842.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940787 56021679 + Rnf13 protein_coding processed_transcript MGP_WSBEiJ_T0059843.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940794 56044625 + Rnf13 protein_coding processed_transcript MGP_WSBEiJ_T0059844.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940794 56045970 + MGP_WSBEiJ_P0059844 Rnf13 protein_coding protein_coding MGP_WSBEiJ_T0059845.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940797 56037037 + MGP_WSBEiJ_P0059845 Rnf13 protein_coding protein_coding MGP_WSBEiJ_T0059846.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940825 56045856 + MGP_WSBEiJ_P0059846 Rnf13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059847.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940832 55977475 + MGP_WSBEiJ_P0059847 Rnf13 protein_coding protein_coding MGP_WSBEiJ_T0059848.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940832 56043969 + MGP_WSBEiJ_P0059848 Rnf13 protein_coding protein_coding MGP_WSBEiJ_T0059849.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 55940832 56012162 + MGP_WSBEiJ_P0059849 Rnf13 protein_coding protein_coding MGP_WSBEiJ_T0059850.1 MGP_WSBEiJ_G0026474.1 mouse_genomes_project 3 56010478 56014327 + Rnf13 protein_coding retained_intron MGP_WSBEiJ_T0001109.1 MGP_WSBEiJ_G0001041.1 mouse_genomes_project 3 31553195 31554269 - TEC TEC MGP_WSBEiJ_T0098217.1 MGP_WSBEiJ_G0036880.1 mouse_genomes_project 3 134780945 134781052 + Gm23196 snRNA snRNA MGP_WSBEiJ_T0013890.1 MGP_WSBEiJ_G0012020.1 mouse_genomes_project 3 121313158 121313966 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001292.1 MGP_WSBEiJ_G0001222.1 mouse_genomes_project 3 128585975 128587591 - TEC TEC MGP_WSBEiJ_T0013782.1 MGP_WSBEiJ_G0011912.1 mouse_genomes_project 3 87652275 87652422 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100276.1 MGP_WSBEiJ_G0038794.1 mouse_genomes_project 3 94630037 94633241 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100277.1 MGP_WSBEiJ_G0038794.1 mouse_genomes_project 3 94630088 94640315 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0007429.1 MGP_WSBEiJ_G0006088.1 mouse_genomes_project 3 50973976 50990154 - Gm20750 lincRNA lincRNA MGP_WSBEiJ_T0061943.1 MGP_WSBEiJ_G0026967.1 mouse_genomes_project 3 106765661 106786902 + MGP_WSBEiJ_P0061943 Chia1 protein_coding protein_coding MGP_WSBEiJ_T0061944.1 MGP_WSBEiJ_G0026967.1 mouse_genomes_project 3 106765822 106783721 + MGP_WSBEiJ_P0061944 Chia1 protein_coding protein_coding MGP_WSBEiJ_T0061945.1 MGP_WSBEiJ_G0026967.1 mouse_genomes_project 3 106777244 106783337 + Chia1 protein_coding retained_intron MGP_WSBEiJ_T0013878.1 MGP_WSBEiJ_G0012008.1 mouse_genomes_project 3 116263334 116263755 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001124.1 MGP_WSBEiJ_G0001056.1 mouse_genomes_project 3 35522910 35525019 + TEC TEC MGP_WSBEiJ_T0099473.1 MGP_WSBEiJ_G0038136.1 mouse_genomes_project 3 125030420 125030550 - Snora24 snoRNA snoRNA MGP_WSBEiJ_T0062578.1 MGP_WSBEiJ_G0027098.1 mouse_genomes_project 3 129198141 129269267 + MGP_WSBEiJ_P0062578 Zgrf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062579.1 MGP_WSBEiJ_G0027098.1 mouse_genomes_project 3 129198141 129269272 + MGP_WSBEiJ_P0062579 Zgrf1 protein_coding protein_coding MGP_WSBEiJ_T0062580.1 MGP_WSBEiJ_G0027098.1 mouse_genomes_project 3 129198154 129268384 + MGP_WSBEiJ_P0062580 Zgrf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062581.1 MGP_WSBEiJ_G0027098.1 mouse_genomes_project 3 129198154 129269274 + MGP_WSBEiJ_P0062581 Zgrf1 protein_coding protein_coding MGP_WSBEiJ_T0062582.1 MGP_WSBEiJ_G0027098.1 mouse_genomes_project 3 129198285 129210777 + MGP_WSBEiJ_P0062582 Zgrf1 protein_coding protein_coding MGP_WSBEiJ_T0062583.1 MGP_WSBEiJ_G0027098.1 mouse_genomes_project 3 129232854 129268236 + MGP_WSBEiJ_P0062583 Zgrf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062584.1 MGP_WSBEiJ_G0027098.1 mouse_genomes_project 3 129245014 129251793 + Zgrf1 protein_coding retained_intron MGP_WSBEiJ_T0001287.1 MGP_WSBEiJ_G0001217.1 mouse_genomes_project 3 128256000 128259182 + TEC TEC MGP_WSBEiJ_T0007623.1 MGP_WSBEiJ_G0006241.1 mouse_genomes_project 3 145932512 145954057 + Gm42703 lincRNA lincRNA MGP_WSBEiJ_T0007661.1 MGP_WSBEiJ_G0006268.1 mouse_genomes_project 3 156031420 156052662 - Gm43832 lincRNA lincRNA MGP_WSBEiJ_T0007662.1 MGP_WSBEiJ_G0006268.1 mouse_genomes_project 3 156034921 156045228 - Gm43832 lincRNA lincRNA MGP_WSBEiJ_T0001314.1 MGP_WSBEiJ_G0001243.1 mouse_genomes_project 3 132512348 132514705 - TEC TEC MGP_WSBEiJ_T0013954.1 MGP_WSBEiJ_G0012084.1 mouse_genomes_project 3 142784889 142785142 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061598.1 MGP_WSBEiJ_G0026884.1 mouse_genomes_project 3 98176642 98266080 + Notch2 protein_coding retained_intron MGP_WSBEiJ_T0061599.1 MGP_WSBEiJ_G0026884.1 mouse_genomes_project 3 98176653 98318321 + MGP_WSBEiJ_P0061599 Notch2 protein_coding protein_coding MGP_WSBEiJ_T0013706.1 MGP_WSBEiJ_G0011836.1 mouse_genomes_project 3 59703452 59703947 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004204.1 MGP_WSBEiJ_G0003694.1 mouse_genomes_project 3 89445121 89446259 + Gm42809 antisense antisense MGP_WSBEiJ_T0099419.1 MGP_WSBEiJ_G0038082.1 mouse_genomes_project 3 19512076 19512205 - Gm26354 snoRNA snoRNA MGP_WSBEiJ_T0007516.1 MGP_WSBEiJ_G0006152.1 mouse_genomes_project 3 98090431 98128446 + Gm5544 lincRNA lincRNA MGP_WSBEiJ_T0059434.1 MGP_WSBEiJ_G0026401.1 mouse_genomes_project 3 34104773 34111147 + MGP_WSBEiJ_P0059434 protein_coding protein_coding MGP_WSBEiJ_T0013942.1 MGP_WSBEiJ_G0012072.1 mouse_genomes_project 3 139641878 139642602 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013709.1 MGP_WSBEiJ_G0011839.1 mouse_genomes_project 3 61328176 61329224 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013733.1 MGP_WSBEiJ_G0011863.1 mouse_genomes_project 3 68621329 68622209 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062103.1 MGP_WSBEiJ_G0027010.1 mouse_genomes_project 3 109034202 109057992 + MGP_WSBEiJ_P0062103 Psma5 protein_coding protein_coding MGP_WSBEiJ_T0062104.1 MGP_WSBEiJ_G0027010.1 mouse_genomes_project 3 109046898 109057914 + MGP_WSBEiJ_P0062104 Psma5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100797.1 MGP_WSBEiJ_G0039255.1 mouse_genomes_project 3 106984604 107007058 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0063051.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575577 147579370 + Odf2l protein_coding retained_intron MGP_WSBEiJ_T0063052.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575578 147613862 + MGP_WSBEiJ_P0063052 Odf2l protein_coding protein_coding MGP_WSBEiJ_T0063053.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575578 147613882 + MGP_WSBEiJ_P0063053 Odf2l protein_coding protein_coding MGP_WSBEiJ_T0063054.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575589 147594363 + Odf2l protein_coding retained_intron MGP_WSBEiJ_T0063055.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575589 147613852 + MGP_WSBEiJ_P0063055 Odf2l protein_coding protein_coding MGP_WSBEiJ_T0063056.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575597 147594274 + Odf2l protein_coding retained_intron MGP_WSBEiJ_T0063057.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575609 147613856 + MGP_WSBEiJ_P0063057 Odf2l protein_coding protein_coding MGP_WSBEiJ_T0063058.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575610 147585992 + MGP_WSBEiJ_P0063058 Odf2l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063059.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575963 147576619 + Odf2l protein_coding processed_transcript MGP_WSBEiJ_T0063060.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147575963 147583130 + MGP_WSBEiJ_P0063060 Odf2l protein_coding protein_coding MGP_WSBEiJ_T0063061.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147577635 147585984 + MGP_WSBEiJ_P0063061 Odf2l protein_coding protein_coding MGP_WSBEiJ_T0063062.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147584845 147601478 + MGP_WSBEiJ_P0063062 Odf2l protein_coding protein_coding MGP_WSBEiJ_T0063063.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147589604 147607587 + Odf2l protein_coding retained_intron MGP_WSBEiJ_T0063064.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147596537 147607587 + Odf2l protein_coding retained_intron MGP_WSBEiJ_T0063065.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147596746 147603407 + Odf2l protein_coding processed_transcript MGP_WSBEiJ_T0063066.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147596755 147613860 + Odf2l protein_coding retained_intron MGP_WSBEiJ_T0063067.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147596777 147607539 + MGP_WSBEiJ_P0063067 Odf2l protein_coding protein_coding MGP_WSBEiJ_T0063068.1 MGP_WSBEiJ_G0027192.1 mouse_genomes_project 3 147607527 147612137 + MGP_WSBEiJ_P0063068 Odf2l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097354.1 MGP_WSBEiJ_G0036028.1 mouse_genomes_project 3 104312654 104313720 - Gm43387 sense_intronic sense_intronic MGP_WSBEiJ_T0060680.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88638667 88650554 + MGP_WSBEiJ_P0060680 Clk2 protein_coding protein_coding MGP_WSBEiJ_T0060681.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88638689 88641077 + MGP_WSBEiJ_P0060681 Clk2 protein_coding protein_coding MGP_WSBEiJ_T0060682.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88638690 88650554 + MGP_WSBEiJ_P0060682 Clk2 protein_coding protein_coding MGP_WSBEiJ_T0060683.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88638691 88650552 + Clk2 protein_coding retained_intron MGP_WSBEiJ_T0060684.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88638691 88647090 + MGP_WSBEiJ_P0060684 Clk2 protein_coding protein_coding MGP_WSBEiJ_T0060685.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88638712 88650554 + MGP_WSBEiJ_P0060685 Clk2 protein_coding protein_coding MGP_WSBEiJ_T0060686.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88638851 88650554 + MGP_WSBEiJ_P0060686 Clk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060687.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88641036 88644253 + Clk2 protein_coding retained_intron MGP_WSBEiJ_T0060688.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88645797 88649713 + Clk2 protein_coding retained_intron MGP_WSBEiJ_T0060689.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88647587 88649380 + Clk2 protein_coding retained_intron MGP_WSBEiJ_T0060690.1 MGP_WSBEiJ_G0026661.1 mouse_genomes_project 3 88648667 88649604 + Clk2 protein_coding processed_transcript MGP_WSBEiJ_T0062141.1 MGP_WSBEiJ_G0027018.1 mouse_genomes_project 3 109353232 109359267 - MGP_WSBEiJ_P0062141 protein_coding protein_coding MGP_WSBEiJ_T0062142.1 MGP_WSBEiJ_G0027018.1 mouse_genomes_project 3 109353232 109358971 - MGP_WSBEiJ_P0062142 protein_coding protein_coding MGP_WSBEiJ_T0007478.1 MGP_WSBEiJ_G0006127.1 mouse_genomes_project 3 84643526 84675433 - Gm42813 lincRNA lincRNA MGP_WSBEiJ_T0010342.1 MGP_WSBEiJ_G0008499.1 mouse_genomes_project 3 44765360 44765476 - Mir6379 miRNA miRNA MGP_WSBEiJ_T0001300.1 MGP_WSBEiJ_G0001230.1 mouse_genomes_project 3 128903472 128905550 - TEC TEC MGP_WSBEiJ_T0013558.1 MGP_WSBEiJ_G0011688.1 mouse_genomes_project 3 11400714 11408011 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059157.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25215077 25223641 + Pld1 protein_coding processed_transcript MGP_WSBEiJ_T0059158.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25215078 25300700 + MGP_WSBEiJ_P0059158 Pld1 protein_coding protein_coding MGP_WSBEiJ_T0059159.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25253540 25405110 + MGP_WSBEiJ_P0059159 Pld1 protein_coding protein_coding MGP_WSBEiJ_T0059160.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25295902 25406298 + MGP_WSBEiJ_P0059160 Pld1 protein_coding protein_coding MGP_WSBEiJ_T0059161.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25303276 25406422 + MGP_WSBEiJ_P0059161 Pld1 protein_coding protein_coding MGP_WSBEiJ_T0059162.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25313205 25320075 + Pld1 protein_coding processed_transcript MGP_WSBEiJ_T0059163.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25339490 25356162 + Pld1 protein_coding retained_intron MGP_WSBEiJ_T0059164.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25348663 25351984 + Pld1 protein_coding retained_intron MGP_WSBEiJ_T0059165.1 MGP_WSBEiJ_G0026356.1 mouse_genomes_project 3 25382410 25403855 + MGP_WSBEiJ_P0059165 Pld1 protein_coding protein_coding MGP_WSBEiJ_T0058932.1 MGP_WSBEiJ_G0026294.1 mouse_genomes_project 3 5309262 5363337 + MGP_WSBEiJ_P0058932 Stmn2 protein_coding protein_coding MGP_WSBEiJ_T0058933.1 MGP_WSBEiJ_G0026294.1 mouse_genomes_project 3 5309417 5350529 + Stmn2 protein_coding retained_intron MGP_WSBEiJ_T0058934.1 MGP_WSBEiJ_G0026294.1 mouse_genomes_project 3 5309488 5343258 + Stmn2 protein_coding retained_intron MGP_WSBEiJ_T0058935.1 MGP_WSBEiJ_G0026294.1 mouse_genomes_project 3 5361995 5363306 + Stmn2 protein_coding processed_transcript MGP_WSBEiJ_T0060053.1 MGP_WSBEiJ_G0026528.1 mouse_genomes_project 3 66665265 67254091 + MGP_WSBEiJ_P0060053 Schip1 protein_coding protein_coding MGP_WSBEiJ_T0060054.1 MGP_WSBEiJ_G0026528.1 mouse_genomes_project 3 66665265 67254091 + MGP_WSBEiJ_P0060054 Schip1 protein_coding protein_coding MGP_WSBEiJ_T0060055.1 MGP_WSBEiJ_G0026528.1 mouse_genomes_project 3 67087108 67254108 + MGP_WSBEiJ_P0060055 Schip1 protein_coding protein_coding MGP_WSBEiJ_T0060056.1 MGP_WSBEiJ_G0026528.1 mouse_genomes_project 3 67113561 67246288 + MGP_WSBEiJ_P0060056 Schip1 protein_coding protein_coding MGP_WSBEiJ_T0060057.1 MGP_WSBEiJ_G0026528.1 mouse_genomes_project 3 67114278 67254090 + MGP_WSBEiJ_P0060057 Schip1 protein_coding protein_coding MGP_WSBEiJ_T0060058.1 MGP_WSBEiJ_G0026528.1 mouse_genomes_project 3 67191683 67254091 + MGP_WSBEiJ_P0060058 Schip1 protein_coding protein_coding MGP_WSBEiJ_T0060059.1 MGP_WSBEiJ_G0026528.1 mouse_genomes_project 3 67208181 67254091 + MGP_WSBEiJ_P0060059 Schip1 protein_coding protein_coding MGP_WSBEiJ_T0060060.1 MGP_WSBEiJ_G0026528.1 mouse_genomes_project 3 67220195 67222184 + Schip1 protein_coding retained_intron MGP_WSBEiJ_T0011348.1 MGP_WSBEiJ_G0009505.1 mouse_genomes_project 3 103576694 103576994 + Gm23820 misc_RNA misc_RNA MGP_WSBEiJ_T0001269.1 MGP_WSBEiJ_G0001199.1 mouse_genomes_project 3 122809370 122810656 + TEC TEC MGP_WSBEiJ_T0059883.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57387464 57404269 - MGP_WSBEiJ_P0059883 P2ry14 protein_coding protein_coding MGP_WSBEiJ_T0059884.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57388234 57427541 - MGP_WSBEiJ_P0059884 P2ry14 protein_coding protein_coding MGP_WSBEiJ_T0059885.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57388234 57404131 - MGP_WSBEiJ_P0059885 P2ry14 protein_coding protein_coding MGP_WSBEiJ_T0059886.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57388235 57404129 - MGP_WSBEiJ_P0059886 P2ry14 protein_coding protein_coding MGP_WSBEiJ_T0059887.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57388541 57404834 - MGP_WSBEiJ_P0059887 P2ry14 protein_coding protein_coding MGP_WSBEiJ_T0059888.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57389316 57404720 - MGP_WSBEiJ_P0059888 P2ry14 protein_coding protein_coding MGP_WSBEiJ_T0059889.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57389620 57404625 - MGP_WSBEiJ_P0059889 P2ry14 protein_coding protein_coding MGP_WSBEiJ_T0059890.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57389635 57405966 - MGP_WSBEiJ_P0059890 P2ry14 protein_coding protein_coding MGP_WSBEiJ_T0059891.1 MGP_WSBEiJ_G0026485.1 mouse_genomes_project 3 57419885 57427667 - P2ry14 protein_coding retained_intron MGP_WSBEiJ_T0062284.1 MGP_WSBEiJ_G0027048.1 mouse_genomes_project 3 117666782 117692621 + MGP_WSBEiJ_P0062284 Dbt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062285.1 MGP_WSBEiJ_G0027048.1 mouse_genomes_project 3 117666795 117703408 + MGP_WSBEiJ_P0062285 Dbt protein_coding protein_coding MGP_WSBEiJ_T0062286.1 MGP_WSBEiJ_G0027048.1 mouse_genomes_project 3 117673802 117688351 + Dbt protein_coding retained_intron MGP_WSBEiJ_T0060132.1 MGP_WSBEiJ_G0026547.1 mouse_genomes_project 3 74166566 74364206 - MGP_WSBEiJ_P0060132 Wdr49 protein_coding protein_coding MGP_WSBEiJ_T0060133.1 MGP_WSBEiJ_G0026547.1 mouse_genomes_project 3 74166566 74364539 - MGP_WSBEiJ_P0060133 Wdr49 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060134.1 MGP_WSBEiJ_G0026547.1 mouse_genomes_project 3 74287874 74334041 - MGP_WSBEiJ_P0060134 Wdr49 protein_coding protein_coding MGP_WSBEiJ_T0060135.1 MGP_WSBEiJ_G0026547.1 mouse_genomes_project 3 74287874 74364207 - MGP_WSBEiJ_P0060135 Wdr49 protein_coding protein_coding MGP_WSBEiJ_T0060136.1 MGP_WSBEiJ_G0026547.1 mouse_genomes_project 3 74361869 74364622 - Wdr49 protein_coding retained_intron MGP_WSBEiJ_T0001131.1 MGP_WSBEiJ_G0001063.1 mouse_genomes_project 3 38648988 38649913 - TEC TEC MGP_WSBEiJ_T0061065.1 MGP_WSBEiJ_G0026761.1 mouse_genomes_project 3 92554321 92555924 - MGP_WSBEiJ_P0061065 Lce1k protein_coding protein_coding MGP_WSBEiJ_T0004206.1 MGP_WSBEiJ_G0003696.1 mouse_genomes_project 3 90047905 90057445 + antisense antisense MGP_WSBEiJ_T0059540.1 MGP_WSBEiJ_G0026420.1 mouse_genomes_project 3 38328430 38343966 + MGP_WSBEiJ_P0059540 Slc25a31 protein_coding protein_coding MGP_WSBEiJ_T0062585.1 MGP_WSBEiJ_G0027099.1 mouse_genomes_project 3 129288960 129292089 + MGP_WSBEiJ_P0062585 Neurog2 protein_coding protein_coding MGP_WSBEiJ_T0017429.1 MGP_WSBEiJ_G0014952.1 mouse_genomes_project 3 157258482 157261907 + AI606473 processed_transcript lincRNA MGP_WSBEiJ_T0017430.1 MGP_WSBEiJ_G0014952.1 mouse_genomes_project 3 157259652 157260454 + AI606473 processed_transcript retained_intron MGP_WSBEiJ_T0007351.1 MGP_WSBEiJ_G0006029.1 mouse_genomes_project 3 14371142 14377326 - Gm30340 lincRNA lincRNA MGP_WSBEiJ_T0059819.1 MGP_WSBEiJ_G0026468.1 mouse_genomes_project 3 53974937 53977429 + MGP_WSBEiJ_P0059819 Mab21l1 protein_coding protein_coding MGP_WSBEiJ_T0059460.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34498165 34532193 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059461.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34498167 34710752 + MGP_WSBEiJ_P0059461 4932438A13Rik protein_coding protein_coding MGP_WSBEiJ_T0059462.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34498182 34530896 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059463.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34498182 34593357 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059464.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34498188 34710739 + MGP_WSBEiJ_P0059464 4932438A13Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0059465.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34498217 34598115 + MGP_WSBEiJ_P0059465 4932438A13Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059466.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34499528 34580417 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059467.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34509789 34710752 + MGP_WSBEiJ_P0059467 4932438A13Rik protein_coding protein_coding MGP_WSBEiJ_T0059468.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34509802 34530903 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059469.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34532670 34537336 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059470.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34537245 34598117 + MGP_WSBEiJ_P0059470 4932438A13Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059471.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34546189 34566414 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059472.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34596183 34598112 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059473.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34662282 34710734 + MGP_WSBEiJ_P0059473 4932438A13Rik protein_coding protein_coding MGP_WSBEiJ_T0059474.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34666659 34710735 + MGP_WSBEiJ_P0059474 4932438A13Rik protein_coding protein_coding MGP_WSBEiJ_T0059475.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34666790 34710733 + MGP_WSBEiJ_P0059475 4932438A13Rik protein_coding protein_coding MGP_WSBEiJ_T0059476.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34669590 34685040 + MGP_WSBEiJ_P0059476 4932438A13Rik protein_coding protein_coding MGP_WSBEiJ_T0059477.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34673919 34678919 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059478.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34675243 34679149 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059479.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34679491 34693572 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059480.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34693554 34696649 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059481.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34694251 34696651 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0059482.1 MGP_WSBEiJ_G0026406.1 mouse_genomes_project 3 34700460 34703201 + 4932438A13Rik protein_coding retained_intron MGP_WSBEiJ_T0061101.1 MGP_WSBEiJ_G0026784.1 mouse_genomes_project 3 94176827 94202032 + MGP_WSBEiJ_P0061101 Rorc protein_coding protein_coding MGP_WSBEiJ_T0061102.1 MGP_WSBEiJ_G0026784.1 mouse_genomes_project 3 94181455 94202468 + MGP_WSBEiJ_P0061102 Rorc protein_coding protein_coding MGP_WSBEiJ_T0061103.1 MGP_WSBEiJ_G0026784.1 mouse_genomes_project 3 94181483 94201838 + Rorc protein_coding retained_intron MGP_WSBEiJ_T0061104.1 MGP_WSBEiJ_G0026784.1 mouse_genomes_project 3 94181539 94201840 + MGP_WSBEiJ_P0061104 Rorc protein_coding protein_coding MGP_WSBEiJ_T0004200.1 MGP_WSBEiJ_G0003693.1 mouse_genomes_project 3 88879241 88885863 + Gm15417 antisense antisense MGP_WSBEiJ_T0004201.1 MGP_WSBEiJ_G0003693.1 mouse_genomes_project 3 88879361 88885863 + Gm15417 antisense antisense MGP_WSBEiJ_T0004202.1 MGP_WSBEiJ_G0003693.1 mouse_genomes_project 3 88881952 88886298 + Gm15417 antisense antisense MGP_WSBEiJ_T0004203.1 MGP_WSBEiJ_G0003693.1 mouse_genomes_project 3 88883651 88885785 + Gm15417 antisense antisense MGP_WSBEiJ_T0060657.1 MGP_WSBEiJ_G0026657.1 mouse_genomes_project 3 88549846 88555911 - MGP_WSBEiJ_P0060657 Rusc1 protein_coding protein_coding MGP_WSBEiJ_T0060658.1 MGP_WSBEiJ_G0026657.1 mouse_genomes_project 3 88549846 88559156 - MGP_WSBEiJ_P0060658 Rusc1 protein_coding protein_coding MGP_WSBEiJ_T0060659.1 MGP_WSBEiJ_G0026657.1 mouse_genomes_project 3 88549846 88559177 - MGP_WSBEiJ_P0060659 Rusc1 protein_coding protein_coding MGP_WSBEiJ_T0060660.1 MGP_WSBEiJ_G0026657.1 mouse_genomes_project 3 88552986 88555607 - Rusc1 protein_coding retained_intron MGP_WSBEiJ_T0060661.1 MGP_WSBEiJ_G0026657.1 mouse_genomes_project 3 88554086 88555841 - MGP_WSBEiJ_P0060661 Rusc1 protein_coding protein_coding MGP_WSBEiJ_T0060662.1 MGP_WSBEiJ_G0026657.1 mouse_genomes_project 3 88554920 88555621 - Rusc1 protein_coding retained_intron MGP_WSBEiJ_T0060663.1 MGP_WSBEiJ_G0026657.1 mouse_genomes_project 3 88555104 88555841 - MGP_WSBEiJ_P0060663 Rusc1 protein_coding protein_coding MGP_WSBEiJ_T0001201.1 MGP_WSBEiJ_G0001131.1 mouse_genomes_project 3 64254990 64257478 + TEC TEC MGP_WSBEiJ_T0004276.1 MGP_WSBEiJ_G0003738.1 mouse_genomes_project 3 122926387 122930934 + A530020G20Rik antisense antisense MGP_WSBEiJ_T0004277.1 MGP_WSBEiJ_G0003738.1 mouse_genomes_project 3 122926397 122927251 + A530020G20Rik antisense antisense MGP_WSBEiJ_T0004278.1 MGP_WSBEiJ_G0003738.1 mouse_genomes_project 3 122926447 122928340 + A530020G20Rik antisense antisense MGP_WSBEiJ_T0099417.1 MGP_WSBEiJ_G0038080.1 mouse_genomes_project 3 11229061 11229186 - Gm23112 snoRNA snoRNA MGP_WSBEiJ_T0058987.1 MGP_WSBEiJ_G0026311.1 mouse_genomes_project 3 7299579 7366677 + MGP_WSBEiJ_P0058987 Chmp4c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058988.1 MGP_WSBEiJ_G0026311.1 mouse_genomes_project 3 7299653 7326317 + MGP_WSBEiJ_P0058988 Chmp4c protein_coding protein_coding MGP_WSBEiJ_T0097504.1 MGP_WSBEiJ_G0036168.1 mouse_genomes_project 3 157601048 157626201 + Gm38139 sense_overlapping sense_overlapping MGP_WSBEiJ_T0099458.1 MGP_WSBEiJ_G0038121.1 mouse_genomes_project 3 96789702 96789838 - Gm22581 snoRNA snoRNA MGP_WSBEiJ_T0062424.1 MGP_WSBEiJ_G0027074.1 mouse_genomes_project 3 123683220 123703782 + MGP_WSBEiJ_P0062424 Gclm protein_coding protein_coding MGP_WSBEiJ_T0062425.1 MGP_WSBEiJ_G0027074.1 mouse_genomes_project 3 123683222 123699992 + MGP_WSBEiJ_P0062425 Gclm protein_coding protein_coding MGP_WSBEiJ_T0062426.1 MGP_WSBEiJ_G0027074.1 mouse_genomes_project 3 123683315 123702610 + MGP_WSBEiJ_P0062426 Gclm protein_coding protein_coding MGP_WSBEiJ_T0062427.1 MGP_WSBEiJ_G0027074.1 mouse_genomes_project 3 123699154 123703640 + Gclm protein_coding retained_intron MGP_WSBEiJ_T0099445.1 MGP_WSBEiJ_G0038108.1 mouse_genomes_project 3 85218896 85219015 + Gm25876 snoRNA snoRNA MGP_WSBEiJ_T0061798.1 MGP_WSBEiJ_G0026934.1 mouse_genomes_project 3 104268816 104275771 + MGP_WSBEiJ_P0061798 Gm10964 protein_coding protein_coding MGP_WSBEiJ_T0013832.1 MGP_WSBEiJ_G0011962.1 mouse_genomes_project 3 101731942 101732372 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099463.1 MGP_WSBEiJ_G0038126.1 mouse_genomes_project 3 104761547 104761663 + Gm23077 snoRNA snoRNA MGP_WSBEiJ_T0013582.1 MGP_WSBEiJ_G0011712.1 mouse_genomes_project 3 17925717 17927328 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098214.1 MGP_WSBEiJ_G0036877.1 mouse_genomes_project 3 133724836 133724931 + Gm26103 snRNA snRNA MGP_WSBEiJ_T0007423.1 MGP_WSBEiJ_G0006083.1 mouse_genomes_project 3 50205690 50213376 - Gm30074 lincRNA lincRNA MGP_WSBEiJ_T0061029.1 MGP_WSBEiJ_G0026731.1 mouse_genomes_project 3 91924553 91929389 + MGP_WSBEiJ_P0061029 protein_coding protein_coding MGP_WSBEiJ_T0061031.1 MGP_WSBEiJ_G0026731.1 mouse_genomes_project 3 91925727 91926409 + MGP_WSBEiJ_P0061031 protein_coding protein_coding MGP_WSBEiJ_T0063042.1 MGP_WSBEiJ_G0027188.1 mouse_genomes_project 3 147175761 147215416 - MGP_WSBEiJ_P0063042 Clca3a1 protein_coding protein_coding MGP_WSBEiJ_T0001180.1 MGP_WSBEiJ_G0001110.1 mouse_genomes_project 3 51580743 51581924 + TEC TEC MGP_WSBEiJ_T0059057.1 MGP_WSBEiJ_G0026335.1 mouse_genomes_project 3 16592657 16696779 + MGP_WSBEiJ_P0059057 Dnajc5b protein_coding protein_coding MGP_WSBEiJ_T0059058.1 MGP_WSBEiJ_G0026335.1 mouse_genomes_project 3 16592677 16696909 + MGP_WSBEiJ_P0059058 Dnajc5b protein_coding protein_coding MGP_WSBEiJ_T0059059.1 MGP_WSBEiJ_G0026335.1 mouse_genomes_project 3 16615901 16696797 + MGP_WSBEiJ_P0059059 Dnajc5b protein_coding protein_coding MGP_WSBEiJ_T0059060.1 MGP_WSBEiJ_G0026335.1 mouse_genomes_project 3 16616477 16696908 + MGP_WSBEiJ_P0059060 Dnajc5b protein_coding protein_coding MGP_WSBEiJ_T0001081.1 MGP_WSBEiJ_G0001013.1 mouse_genomes_project 3 10223467 10227161 + TEC TEC MGP_WSBEiJ_T0059684.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49675022 49699267 + Mgst2 protein_coding processed_transcript MGP_WSBEiJ_T0059685.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49675888 49693781 + Mgst2 protein_coding processed_transcript MGP_WSBEiJ_T0059686.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49675889 49700136 + MGP_WSBEiJ_P0059686 Mgst2 protein_coding protein_coding MGP_WSBEiJ_T0059687.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49675924 49700136 + MGP_WSBEiJ_P0059687 Mgst2 protein_coding protein_coding MGP_WSBEiJ_T0059688.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49675935 49700130 + MGP_WSBEiJ_P0059688 Mgst2 protein_coding protein_coding MGP_WSBEiJ_T0059689.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49687208 49700132 + Mgst2 protein_coding processed_transcript MGP_WSBEiJ_T0059690.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49687660 49699979 + Mgst2 protein_coding processed_transcript MGP_WSBEiJ_T0059691.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49691847 49700135 + Mgst2 protein_coding retained_intron MGP_WSBEiJ_T0059692.1 MGP_WSBEiJ_G0026442.1 mouse_genomes_project 3 49699076 49700138 + Mgst2 protein_coding retained_intron MGP_WSBEiJ_T0060976.1 MGP_WSBEiJ_G0026709.1 mouse_genomes_project 3 90093086 90095487 - Snapin protein_coding retained_intron MGP_WSBEiJ_T0060977.1 MGP_WSBEiJ_G0026709.1 mouse_genomes_project 3 90093094 90096092 - MGP_WSBEiJ_P0060977 Snapin protein_coding protein_coding MGP_WSBEiJ_T0060978.1 MGP_WSBEiJ_G0026709.1 mouse_genomes_project 3 90093430 90096052 - MGP_WSBEiJ_P0060978 Snapin protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060979.1 MGP_WSBEiJ_G0026709.1 mouse_genomes_project 3 90093433 90096083 - MGP_WSBEiJ_P0060979 Snapin protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060980.1 MGP_WSBEiJ_G0026709.1 mouse_genomes_project 3 90094061 90095851 - Snapin protein_coding retained_intron MGP_WSBEiJ_T0097335.1 MGP_WSBEiJ_G0036009.1 mouse_genomes_project 3 99461569 99465931 + Gm43024 sense_intronic sense_intronic MGP_WSBEiJ_T0098195.1 MGP_WSBEiJ_G0036858.1 mouse_genomes_project 3 96325953 96326119 + Gm24830 snRNA snRNA MGP_WSBEiJ_T0061062.1 MGP_WSBEiJ_G0026759.1 mouse_genomes_project 3 92529495 92531185 - MGP_WSBEiJ_P0061062 Lce1i protein_coding protein_coding MGP_WSBEiJ_T0013829.1 MGP_WSBEiJ_G0011959.1 mouse_genomes_project 3 101353590 101354089 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013571.1 MGP_WSBEiJ_G0011701.1 mouse_genomes_project 3 14975755 14976671 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059223.1 MGP_WSBEiJ_G0026363.1 mouse_genomes_project 3 27991972 27994843 - MGP_WSBEiJ_P0059223 Actrt3 protein_coding protein_coding MGP_WSBEiJ_T0013537.1 MGP_WSBEiJ_G0011667.1 mouse_genomes_project 3 5896928 5897373 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007446.1 MGP_WSBEiJ_G0006100.1 mouse_genomes_project 3 66134028 66136100 - Gm35299 lincRNA lincRNA MGP_WSBEiJ_T0013817.1 MGP_WSBEiJ_G0011947.1 mouse_genomes_project 3 98355547 98356684 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062846.1 MGP_WSBEiJ_G0027147.1 mouse_genomes_project 3 137988685 138279603 - MGP_WSBEiJ_P0062846 Bank1 protein_coding protein_coding MGP_WSBEiJ_T0062847.1 MGP_WSBEiJ_G0027147.1 mouse_genomes_project 3 137988685 138279583 - MGP_WSBEiJ_P0062847 Bank1 protein_coding protein_coding MGP_WSBEiJ_T0062848.1 MGP_WSBEiJ_G0027147.1 mouse_genomes_project 3 137988771 138279562 - MGP_WSBEiJ_P0062848 Bank1 protein_coding protein_coding MGP_WSBEiJ_T0062849.1 MGP_WSBEiJ_G0027147.1 mouse_genomes_project 3 137989244 137990039 - Bank1 protein_coding retained_intron MGP_WSBEiJ_T0062850.1 MGP_WSBEiJ_G0027147.1 mouse_genomes_project 3 137989259 137991426 - Bank1 protein_coding retained_intron MGP_WSBEiJ_T0062851.1 MGP_WSBEiJ_G0027147.1 mouse_genomes_project 3 138150419 138191346 - Bank1 protein_coding retained_intron MGP_WSBEiJ_T0062132.1 MGP_WSBEiJ_G0027016.1 mouse_genomes_project 3 109246141 109331693 - MGP_WSBEiJ_P0062132 5330417C22Rik protein_coding protein_coding MGP_WSBEiJ_T0062133.1 MGP_WSBEiJ_G0027016.1 mouse_genomes_project 3 109248563 109331769 - MGP_WSBEiJ_P0062133 5330417C22Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062134.1 MGP_WSBEiJ_G0027016.1 mouse_genomes_project 3 109248669 109331769 - MGP_WSBEiJ_P0062134 5330417C22Rik protein_coding protein_coding MGP_WSBEiJ_T0062135.1 MGP_WSBEiJ_G0027016.1 mouse_genomes_project 3 109254001 109255428 - 5330417C22Rik protein_coding retained_intron MGP_WSBEiJ_T0062136.1 MGP_WSBEiJ_G0027016.1 mouse_genomes_project 3 109258208 109261505 - 5330417C22Rik protein_coding retained_intron MGP_WSBEiJ_T0062137.1 MGP_WSBEiJ_G0027016.1 mouse_genomes_project 3 109283290 109331704 - 5330417C22Rik protein_coding retained_intron MGP_WSBEiJ_T0013675.1 MGP_WSBEiJ_G0011805.1 mouse_genomes_project 3 50273084 50273836 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010366.1 MGP_WSBEiJ_G0008523.1 mouse_genomes_project 3 96215686 96215827 + Gm44492 miRNA miRNA MGP_WSBEiJ_T0013743.1 MGP_WSBEiJ_G0011873.1 mouse_genomes_project 3 71364943 71365457 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013635.1 MGP_WSBEiJ_G0011765.1 mouse_genomes_project 3 39140153 39140616 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099470.1 MGP_WSBEiJ_G0038133.1 mouse_genomes_project 3 117620085 117620182 + Gm26358 snoRNA snoRNA MGP_WSBEiJ_T0013950.1 MGP_WSBEiJ_G0012080.1 mouse_genomes_project 3 141528936 141529380 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013810.1 MGP_WSBEiJ_G0011940.1 mouse_genomes_project 3 95769458 95770353 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059733.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52498749 52528689 + MGP_WSBEiJ_P0059733 Postn protein_coding protein_coding MGP_WSBEiJ_T0059734.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52498749 52528692 + MGP_WSBEiJ_P0059734 Postn protein_coding protein_coding MGP_WSBEiJ_T0059735.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52498765 52528689 + MGP_WSBEiJ_P0059735 Postn protein_coding protein_coding MGP_WSBEiJ_T0059736.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52498783 52528107 + MGP_WSBEiJ_P0059736 Postn protein_coding protein_coding MGP_WSBEiJ_T0059737.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52515211 52528302 + MGP_WSBEiJ_P0059737 Postn protein_coding protein_coding MGP_WSBEiJ_T0059738.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52516139 52522367 + Postn protein_coding retained_intron MGP_WSBEiJ_T0059739.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52520759 52528142 + Postn protein_coding retained_intron MGP_WSBEiJ_T0059740.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52520761 52528237 + Postn protein_coding retained_intron MGP_WSBEiJ_T0059741.1 MGP_WSBEiJ_G0026453.1 mouse_genomes_project 3 52526543 52528048 + Postn protein_coding retained_intron MGP_WSBEiJ_T0013963.1 MGP_WSBEiJ_G0012093.1 mouse_genomes_project 3 146797724 146798217 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001207.1 MGP_WSBEiJ_G0001137.1 mouse_genomes_project 3 67771743 67774726 - TEC TEC MGP_WSBEiJ_T0062906.1 MGP_WSBEiJ_G0027161.1 mouse_genomes_project 3 140268263 140284515 + MGP_WSBEiJ_P0062906 Adh7 protein_coding protein_coding MGP_WSBEiJ_T0062907.1 MGP_WSBEiJ_G0027161.1 mouse_genomes_project 3 140272598 140274215 + Adh7 protein_coding retained_intron MGP_WSBEiJ_T0062908.1 MGP_WSBEiJ_G0027161.1 mouse_genomes_project 3 140279173 140282564 + Adh7 protein_coding processed_transcript MGP_WSBEiJ_T0098200.1 MGP_WSBEiJ_G0036863.1 mouse_genomes_project 3 97240828 97240938 - Gm24435 snRNA snRNA MGP_WSBEiJ_T0059697.1 MGP_WSBEiJ_G0026445.1 mouse_genomes_project 3 51045878 51083423 - MGP_WSBEiJ_P0059697 Cog6 protein_coding protein_coding MGP_WSBEiJ_T0059698.1 MGP_WSBEiJ_G0026445.1 mouse_genomes_project 3 51046125 51060893 - Cog6 protein_coding retained_intron MGP_WSBEiJ_T0059699.1 MGP_WSBEiJ_G0026445.1 mouse_genomes_project 3 51048734 51083402 - MGP_WSBEiJ_P0059699 Cog6 protein_coding protein_coding MGP_WSBEiJ_T0059700.1 MGP_WSBEiJ_G0026445.1 mouse_genomes_project 3 51057552 51083404 - MGP_WSBEiJ_P0059700 Cog6 protein_coding protein_coding MGP_WSBEiJ_T0059701.1 MGP_WSBEiJ_G0026445.1 mouse_genomes_project 3 51062014 51083396 - Cog6 protein_coding retained_intron MGP_WSBEiJ_T0059702.1 MGP_WSBEiJ_G0026445.1 mouse_genomes_project 3 51076553 51083398 - Cog6 protein_coding retained_intron MGP_WSBEiJ_T0062018.1 MGP_WSBEiJ_G0026990.1 mouse_genomes_project 3 108354125 108355675 - Strip1 protein_coding retained_intron MGP_WSBEiJ_T0062019.1 MGP_WSBEiJ_G0026990.1 mouse_genomes_project 3 108354125 108373284 - MGP_WSBEiJ_P0062019 Strip1 protein_coding protein_coding MGP_WSBEiJ_T0062020.1 MGP_WSBEiJ_G0026990.1 mouse_genomes_project 3 108354128 108368444 - Strip1 protein_coding processed_transcript MGP_WSBEiJ_T0062021.1 MGP_WSBEiJ_G0026990.1 mouse_genomes_project 3 108358487 108361669 - Strip1 protein_coding processed_transcript MGP_WSBEiJ_T0062022.1 MGP_WSBEiJ_G0026990.1 mouse_genomes_project 3 108362045 108373284 - Strip1 protein_coding retained_intron MGP_WSBEiJ_T0063073.1 MGP_WSBEiJ_G0027194.1 mouse_genomes_project 3 148062767 148091176 + MGP_WSBEiJ_P0063073 Znhit6 protein_coding protein_coding MGP_WSBEiJ_T0063074.1 MGP_WSBEiJ_G0027194.1 mouse_genomes_project 3 148062794 148091858 + MGP_WSBEiJ_P0063074 Znhit6 protein_coding protein_coding MGP_WSBEiJ_T0063075.1 MGP_WSBEiJ_G0027194.1 mouse_genomes_project 3 148062809 148065092 + MGP_WSBEiJ_P0063075 Znhit6 protein_coding protein_coding MGP_WSBEiJ_T0063076.1 MGP_WSBEiJ_G0027194.1 mouse_genomes_project 3 148062820 148081573 + MGP_WSBEiJ_P0063076 Znhit6 protein_coding protein_coding MGP_WSBEiJ_T0063077.1 MGP_WSBEiJ_G0027194.1 mouse_genomes_project 3 148062836 148069211 + MGP_WSBEiJ_P0063077 Znhit6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063078.1 MGP_WSBEiJ_G0027194.1 mouse_genomes_project 3 148062898 148079585 + MGP_WSBEiJ_P0063078 Znhit6 protein_coding protein_coding MGP_WSBEiJ_T0063079.1 MGP_WSBEiJ_G0027194.1 mouse_genomes_project 3 148082775 148091075 + Znhit6 protein_coding retained_intron MGP_WSBEiJ_T0098151.1 MGP_WSBEiJ_G0036814.1 mouse_genomes_project 3 33325344 33325449 + Gm25696 snRNA snRNA MGP_WSBEiJ_T0013732.1 MGP_WSBEiJ_G0011862.1 mouse_genomes_project 3 68381372 68381878 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062903.1 MGP_WSBEiJ_G0027160.1 mouse_genomes_project 3 140209480 140230378 - MGP_WSBEiJ_P0062903 4930579F01Rik protein_coding protein_coding MGP_WSBEiJ_T0062904.1 MGP_WSBEiJ_G0027160.1 mouse_genomes_project 3 140209537 140230418 - MGP_WSBEiJ_P0062904 4930579F01Rik protein_coding protein_coding MGP_WSBEiJ_T0062905.1 MGP_WSBEiJ_G0027160.1 mouse_genomes_project 3 140227366 140237531 - 4930579F01Rik protein_coding processed_transcript MGP_WSBEiJ_T0061878.1 MGP_WSBEiJ_G0026950.1 mouse_genomes_project 3 105428327 105475252 - MGP_WSBEiJ_P0061878 Capza1 protein_coding protein_coding MGP_WSBEiJ_T0061879.1 MGP_WSBEiJ_G0026950.1 mouse_genomes_project 3 105442993 105475147 - MGP_WSBEiJ_P0061879 Capza1 protein_coding protein_coding MGP_WSBEiJ_T0061880.1 MGP_WSBEiJ_G0026950.1 mouse_genomes_project 3 105448650 105452520 - Capza1 protein_coding retained_intron MGP_WSBEiJ_T0061881.1 MGP_WSBEiJ_G0026950.1 mouse_genomes_project 3 105451845 105475120 - Capza1 protein_coding retained_intron MGP_WSBEiJ_T0001250.1 MGP_WSBEiJ_G0001180.1 mouse_genomes_project 3 108622145 108622831 + TEC TEC MGP_WSBEiJ_T0097357.1 MGP_WSBEiJ_G0036031.1 mouse_genomes_project 3 104611935 104613076 - Gm42696 sense_intronic sense_intronic MGP_WSBEiJ_T0060448.1 MGP_WSBEiJ_G0026620.1 mouse_genomes_project 3 87340169 87352851 - MGP_WSBEiJ_P0060448 Bcan protein_coding protein_coding MGP_WSBEiJ_T0060449.1 MGP_WSBEiJ_G0026620.1 mouse_genomes_project 3 87345148 87347085 - Bcan protein_coding retained_intron MGP_WSBEiJ_T0060450.1 MGP_WSBEiJ_G0026620.1 mouse_genomes_project 3 87345148 87350480 - Bcan protein_coding retained_intron MGP_WSBEiJ_T0060451.1 MGP_WSBEiJ_G0026620.1 mouse_genomes_project 3 87346228 87348990 - Bcan protein_coding retained_intron MGP_WSBEiJ_T0060452.1 MGP_WSBEiJ_G0026620.1 mouse_genomes_project 3 87349069 87349890 - Bcan protein_coding retained_intron MGP_WSBEiJ_T0060453.1 MGP_WSBEiJ_G0026620.1 mouse_genomes_project 3 87349757 87352255 - MGP_WSBEiJ_P0060453 Bcan protein_coding protein_coding MGP_WSBEiJ_T0063198.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154940480 154955336 - Gipc2 protein_coding processed_transcript MGP_WSBEiJ_T0063199.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154940785 155020340 - MGP_WSBEiJ_P0063199 Gipc2 protein_coding protein_coding MGP_WSBEiJ_T0063200.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154940787 154953987 - Gipc2 protein_coding processed_transcript MGP_WSBEiJ_T0063201.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154940828 154953535 - Gipc2 protein_coding processed_transcript MGP_WSBEiJ_T0063202.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154940964 154949789 - Gipc2 protein_coding retained_intron MGP_WSBEiJ_T0063203.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154941139 154996957 - Gipc2 protein_coding processed_transcript MGP_WSBEiJ_T0063204.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154948771 154955220 - Gipc2 protein_coding retained_intron MGP_WSBEiJ_T0063205.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154977061 154987370 - Gipc2 protein_coding retained_intron MGP_WSBEiJ_T0063206.1 MGP_WSBEiJ_G0027220.1 mouse_genomes_project 3 154979460 155019860 - Gipc2 protein_coding processed_transcript MGP_WSBEiJ_T0001350.1 MGP_WSBEiJ_G0001279.1 mouse_genomes_project 3 156185862 156189274 - TEC TEC MGP_WSBEiJ_T0007437.1 MGP_WSBEiJ_G0006093.1 mouse_genomes_project 3 56172281 56176847 - Gm42512 lincRNA lincRNA MGP_WSBEiJ_T0059013.1 MGP_WSBEiJ_G0026318.1 mouse_genomes_project 3 11623862 11645194 + MGP_WSBEiJ_P0059013 Car13 protein_coding protein_coding MGP_WSBEiJ_T0004286.1 MGP_WSBEiJ_G0003745.1 mouse_genomes_project 3 128010519 128016899 - Gm17225 antisense antisense MGP_WSBEiJ_T0011349.1 MGP_WSBEiJ_G0009506.1 mouse_genomes_project 3 108154486 108154819 - Gm24383 misc_RNA misc_RNA MGP_WSBEiJ_T0004215.1 MGP_WSBEiJ_G0003703.1 mouse_genomes_project 3 95145718 95155835 + Gm16740 antisense antisense MGP_WSBEiJ_T0096817.1 MGP_WSBEiJ_G0035498.1 mouse_genomes_project 3 84196985 84197510 - pseudogene pseudogene MGP_WSBEiJ_T0001184.1 MGP_WSBEiJ_G0001114.1 mouse_genomes_project 3 53708491 53710510 + TEC TEC MGP_WSBEiJ_T0060099.1 MGP_WSBEiJ_G0026536.1 mouse_genomes_project 3 67876306 67877506 + MGP_WSBEiJ_P0060099 Arl14 protein_coding protein_coding MGP_WSBEiJ_T0060048.1 MGP_WSBEiJ_G0026525.1 mouse_genomes_project 3 66166496 66187508 + MGP_WSBEiJ_P0060048 Mfsd1 protein_coding protein_coding MGP_WSBEiJ_T0060049.1 MGP_WSBEiJ_G0026525.1 mouse_genomes_project 3 66168495 66179474 + Mfsd1 protein_coding processed_transcript MGP_WSBEiJ_T0004135.1 MGP_WSBEiJ_G0003644.1 mouse_genomes_project 3 29960106 29960648 - Gm37592 antisense antisense MGP_WSBEiJ_T0013636.1 MGP_WSBEiJ_G0011766.1 mouse_genomes_project 3 40036561 40036709 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061086.1 MGP_WSBEiJ_G0026775.1 mouse_genomes_project 3 93064713 93065811 + MGP_WSBEiJ_P0061086 protein_coding protein_coding MGP_WSBEiJ_T0007383.1 MGP_WSBEiJ_G0006054.1 mouse_genomes_project 3 32232838 32250522 - Gm3143 lincRNA lincRNA MGP_WSBEiJ_T0007384.1 MGP_WSBEiJ_G0006054.1 mouse_genomes_project 3 32243432 32250524 - Gm3143 lincRNA lincRNA MGP_WSBEiJ_T0001110.1 MGP_WSBEiJ_G0001042.1 mouse_genomes_project 3 31569483 31574819 + TEC TEC MGP_WSBEiJ_T0013987.1 MGP_WSBEiJ_G0012117.1 mouse_genomes_project 3 161991481 161992478 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001171.1 MGP_WSBEiJ_G0001101.1 mouse_genomes_project 3 50025687 50028974 - TEC TEC MGP_WSBEiJ_T0098196.1 MGP_WSBEiJ_G0036859.1 mouse_genomes_project 3 96368030 96368195 - Rnu1b2 snRNA snRNA MGP_WSBEiJ_T0063190.1 MGP_WSBEiJ_G0027217.1 mouse_genomes_project 3 154554079 154572941 - MGP_WSBEiJ_P0063190 Ifi44 protein_coding protein_coding MGP_WSBEiJ_T0063191.1 MGP_WSBEiJ_G0027217.1 mouse_genomes_project 3 154555587 154572863 - Ifi44 protein_coding processed_transcript MGP_WSBEiJ_T0063192.1 MGP_WSBEiJ_G0027217.1 mouse_genomes_project 3 154568673 154572928 - Ifi44 protein_coding retained_intron MGP_WSBEiJ_T0063193.1 MGP_WSBEiJ_G0027217.1 mouse_genomes_project 3 154568774 154572884 - Ifi44 protein_coding processed_transcript MGP_WSBEiJ_T0061278.1 MGP_WSBEiJ_G0026812.1 mouse_genomes_project 3 95157908 95165611 + MGP_WSBEiJ_P0061278 Cdc42se1 protein_coding protein_coding MGP_WSBEiJ_T0061279.1 MGP_WSBEiJ_G0026812.1 mouse_genomes_project 3 95157986 95161583 + Cdc42se1 protein_coding retained_intron MGP_WSBEiJ_T0061280.1 MGP_WSBEiJ_G0026812.1 mouse_genomes_project 3 95158128 95163784 + MGP_WSBEiJ_P0061280 Cdc42se1 protein_coding protein_coding MGP_WSBEiJ_T0061282.1 MGP_WSBEiJ_G0026812.1 mouse_genomes_project 3 95161488 95163742 + MGP_WSBEiJ_P0061282 Cdc42se1 protein_coding protein_coding MGP_WSBEiJ_T0061283.1 MGP_WSBEiJ_G0026812.1 mouse_genomes_project 3 95161494 95163864 + MGP_WSBEiJ_P0061283 Cdc42se1 protein_coding protein_coding MGP_WSBEiJ_T0059872.1 MGP_WSBEiJ_G0026481.1 mouse_genomes_project 3 56935967 56953322 - MGP_WSBEiJ_P0059872 Siah2 protein_coding protein_coding MGP_WSBEiJ_T0059873.1 MGP_WSBEiJ_G0026481.1 mouse_genomes_project 3 56937205 56947059 - Siah2 protein_coding processed_transcript MGP_WSBEiJ_T0001258.1 MGP_WSBEiJ_G0001188.1 mouse_genomes_project 3 117280444 117281471 + TEC TEC MGP_WSBEiJ_T0013532.1 MGP_WSBEiJ_G0011662.1 mouse_genomes_project 3 5257962 5258770 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013911.1 MGP_WSBEiJ_G0012041.1 mouse_genomes_project 3 129985464 129985898 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004279.1 MGP_WSBEiJ_G0003739.1 mouse_genomes_project 3 123826076 123842584 - Gm42835 antisense antisense MGP_WSBEiJ_T0097323.1 MGP_WSBEiJ_G0035998.1 mouse_genomes_project 3 16777662 16778256 + BC002189 sense_intronic sense_intronic MGP_WSBEiJ_T0013554.1 MGP_WSBEiJ_G0011684.1 mouse_genomes_project 3 10734120 10734375 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007518.1 MGP_WSBEiJ_G0006154.1 mouse_genomes_project 3 99369264 99375710 + lincRNA lincRNA MGP_WSBEiJ_T0061467.1 MGP_WSBEiJ_G0026851.1 mouse_genomes_project 3 96260384 96262024 - MGP_WSBEiJ_P0061467 Hist2h4 protein_coding protein_coding MGP_WSBEiJ_T0060539.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87814021 87839415 - MGP_WSBEiJ_P0060539 Sema4a protein_coding protein_coding MGP_WSBEiJ_T0060540.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87818802 87823980 - Sema4a protein_coding retained_intron MGP_WSBEiJ_T0060541.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87818802 87833223 - Sema4a protein_coding retained_intron MGP_WSBEiJ_T0060542.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87818802 87834629 - Sema4a protein_coding retained_intron MGP_WSBEiJ_T0060543.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87834278 87836041 - MGP_WSBEiJ_P0060543 Sema4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060544.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87834416 87836376 - Sema4a protein_coding retained_intron MGP_WSBEiJ_T0060545.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87834625 87839912 - MGP_WSBEiJ_P0060545 Sema4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060546.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87834687 87843708 - MGP_WSBEiJ_P0060546 Sema4a protein_coding protein_coding MGP_WSBEiJ_T0060547.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87835158 87843637 - MGP_WSBEiJ_P0060547 Sema4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060548.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87835175 87843483 - MGP_WSBEiJ_P0060548 Sema4a protein_coding protein_coding MGP_WSBEiJ_T0060549.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87836633 87839903 - MGP_WSBEiJ_P0060549 Sema4a protein_coding protein_coding MGP_WSBEiJ_T0060550.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87837424 87839440 - Sema4a protein_coding retained_intron MGP_WSBEiJ_T0060551.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87837682 87841013 - MGP_WSBEiJ_P0060551 Sema4a protein_coding protein_coding MGP_WSBEiJ_T0060552.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87839362 87841034 - MGP_WSBEiJ_P0060552 Sema4a protein_coding protein_coding MGP_WSBEiJ_T0060553.1 MGP_WSBEiJ_G0026640.1 mouse_genomes_project 3 87840322 87841034 - Sema4a protein_coding processed_transcript MGP_WSBEiJ_T0001173.1 MGP_WSBEiJ_G0001103.1 mouse_genomes_project 3 50096880 50098679 - TEC TEC MGP_WSBEiJ_T0013580.1 MGP_WSBEiJ_G0011710.1 mouse_genomes_project 3 17499190 17500163 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007592.1 MGP_WSBEiJ_G0006213.1 mouse_genomes_project 3 135490247 135510889 - Gm42563 lincRNA lincRNA MGP_WSBEiJ_T0059063.1 MGP_WSBEiJ_G0026337.1 mouse_genomes_project 3 16785610 16787606 - MGP_WSBEiJ_P0059063 Crh protein_coding protein_coding MGP_WSBEiJ_T0059645.1 MGP_WSBEiJ_G0026435.1 mouse_genomes_project 3 49215443 49240972 + MGP_WSBEiJ_P0059645 Noct protein_coding protein_coding MGP_WSBEiJ_T0059646.1 MGP_WSBEiJ_G0026435.1 mouse_genomes_project 3 49215466 49240959 + MGP_WSBEiJ_P0059646 Noct protein_coding protein_coding MGP_WSBEiJ_T0007405.1 MGP_WSBEiJ_G0006072.1 mouse_genomes_project 3 38934190 38938727 - Gm16508 lincRNA lincRNA MGP_WSBEiJ_T0062890.1 MGP_WSBEiJ_G0027156.1 mouse_genomes_project 3 140088428 140107206 - MGP_WSBEiJ_P0062890 Gm5105 protein_coding protein_coding MGP_WSBEiJ_T0100804.1 MGP_WSBEiJ_G0039262.1 mouse_genomes_project 3 114197606 114231357 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001309.1 MGP_WSBEiJ_G0001238.1 mouse_genomes_project 3 131111030 131114471 + TEC TEC MGP_WSBEiJ_T0060430.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87270668 87277976 - Rrnad1 protein_coding retained_intron MGP_WSBEiJ_T0060431.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87270668 87277976 - MGP_WSBEiJ_P0060431 Rrnad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060432.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87270972 87277993 - MGP_WSBEiJ_P0060432 Rrnad1 protein_coding protein_coding MGP_WSBEiJ_T0060433.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87271382 87277210 - Rrnad1 protein_coding retained_intron MGP_WSBEiJ_T0060434.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87271724 87276107 - MGP_WSBEiJ_P0060434 Rrnad1 protein_coding protein_coding MGP_WSBEiJ_T0060435.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87271725 87273342 - Rrnad1 protein_coding processed_transcript MGP_WSBEiJ_T0060436.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87271729 87277993 - Rrnad1 protein_coding retained_intron MGP_WSBEiJ_T0060437.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87271729 87278566 - Rrnad1 protein_coding retained_intron MGP_WSBEiJ_T0060438.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87271849 87278432 - MGP_WSBEiJ_P0060438 Rrnad1 protein_coding protein_coding MGP_WSBEiJ_T0060439.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87273119 87274941 - Rrnad1 protein_coding retained_intron MGP_WSBEiJ_T0060440.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87273292 87275557 - Rrnad1 protein_coding processed_transcript MGP_WSBEiJ_T0060441.1 MGP_WSBEiJ_G0026616.1 mouse_genomes_project 3 87273322 87277987 - MGP_WSBEiJ_P0060441 Rrnad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013897.1 MGP_WSBEiJ_G0012027.1 mouse_genomes_project 3 123582250 123582662 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013957.1 MGP_WSBEiJ_G0012087.1 mouse_genomes_project 3 144392073 144392413 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013939.1 MGP_WSBEiJ_G0012069.1 mouse_genomes_project 3 138285000 138286505 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058967.1 MGP_WSBEiJ_G0026305.1 mouse_genomes_project 3 7123168 7128987 - MGP_WSBEiJ_P0058967 Fabp4 protein_coding protein_coding MGP_WSBEiJ_T0058968.1 MGP_WSBEiJ_G0026305.1 mouse_genomes_project 3 7123408 7128969 - Fabp4 protein_coding retained_intron MGP_WSBEiJ_T0013918.1 MGP_WSBEiJ_G0012048.1 mouse_genomes_project 3 132663323 132663835 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004144.1 MGP_WSBEiJ_G0003650.1 mouse_genomes_project 3 33605283 33613147 + Mccc1os antisense antisense MGP_WSBEiJ_T0004145.1 MGP_WSBEiJ_G0003650.1 mouse_genomes_project 3 33605363 33615064 + Mccc1os antisense antisense MGP_WSBEiJ_T0004146.1 MGP_WSBEiJ_G0003650.1 mouse_genomes_project 3 33605882 33633606 + Mccc1os antisense antisense MGP_WSBEiJ_T0099449.1 MGP_WSBEiJ_G0038112.1 mouse_genomes_project 3 85555359 85555490 - Gm26343 snoRNA snoRNA MGP_WSBEiJ_T0004224.1 MGP_WSBEiJ_G0003707.1 mouse_genomes_project 3 96202749 96215354 - Gm15444 antisense antisense MGP_WSBEiJ_T0007350.1 MGP_WSBEiJ_G0006028.1 mouse_genomes_project 3 12120236 12140111 - Gm33819 lincRNA lincRNA MGP_WSBEiJ_T0013901.1 MGP_WSBEiJ_G0012031.1 mouse_genomes_project 3 124643935 124644623 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061909.1 MGP_WSBEiJ_G0026958.1 mouse_genomes_project 3 106359372 106438283 - MGP_WSBEiJ_P0061909 Rap1a protein_coding protein_coding MGP_WSBEiJ_T0061910.1 MGP_WSBEiJ_G0026958.1 mouse_genomes_project 3 106369628 106438257 - MGP_WSBEiJ_P0061910 Rap1a protein_coding protein_coding MGP_WSBEiJ_T0060988.1 MGP_WSBEiJ_G0026713.1 mouse_genomes_project 3 90137118 90138493 + MGP_WSBEiJ_P0060988 S100a14 protein_coding protein_coding MGP_WSBEiJ_T0060989.1 MGP_WSBEiJ_G0026713.1 mouse_genomes_project 3 90137129 90139100 + MGP_WSBEiJ_P0060989 S100a14 protein_coding protein_coding MGP_WSBEiJ_T0060990.1 MGP_WSBEiJ_G0026713.1 mouse_genomes_project 3 90137132 90139100 + MGP_WSBEiJ_P0060990 S100a14 protein_coding protein_coding MGP_WSBEiJ_T0060991.1 MGP_WSBEiJ_G0026713.1 mouse_genomes_project 3 90137134 90139089 + S100a14 protein_coding retained_intron MGP_WSBEiJ_T0059833.1 MGP_WSBEiJ_G0026472.1 mouse_genomes_project 3 55847362 55857733 - MGP_WSBEiJ_P0059833 Commd2 protein_coding protein_coding MGP_WSBEiJ_T0059834.1 MGP_WSBEiJ_G0026472.1 mouse_genomes_project 3 55849367 55857726 - MGP_WSBEiJ_P0059834 Commd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059835.1 MGP_WSBEiJ_G0026472.1 mouse_genomes_project 3 55857119 55857733 - Commd2 protein_coding retained_intron MGP_WSBEiJ_T0013985.1 MGP_WSBEiJ_G0012115.1 mouse_genomes_project 3 160445204 160445974 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007534.1 MGP_WSBEiJ_G0006168.1 mouse_genomes_project 3 106358007 106359253 - Gm43848 lincRNA lincRNA MGP_WSBEiJ_T0007608.1 MGP_WSBEiJ_G0006228.1 mouse_genomes_project 3 140801245 140816956 - 4930425O10Rik lincRNA lincRNA MGP_WSBEiJ_T0007470.1 MGP_WSBEiJ_G0006120.1 mouse_genomes_project 3 81878120 81884400 + Gm30043 lincRNA lincRNA MGP_WSBEiJ_T0013665.1 MGP_WSBEiJ_G0011795.1 mouse_genomes_project 3 47652659 47653194 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001126.1 MGP_WSBEiJ_G0001058.1 mouse_genomes_project 3 35672097 35672653 + TEC TEC MGP_WSBEiJ_T0060908.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89623437 89642623 + MGP_WSBEiJ_P0060908 Tpm3 protein_coding protein_coding MGP_WSBEiJ_T0060909.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89630284 89651447 + MGP_WSBEiJ_P0060909 Tpm3 protein_coding protein_coding MGP_WSBEiJ_T0060910.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89630317 89640093 + Tpm3 protein_coding retained_intron MGP_WSBEiJ_T0060911.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89630317 89638390 + Tpm3 protein_coding retained_intron MGP_WSBEiJ_T0060912.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89630367 89649257 + MGP_WSBEiJ_P0060912 Tpm3 protein_coding protein_coding MGP_WSBEiJ_T0060913.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89636883 89638060 + Tpm3 protein_coding retained_intron MGP_WSBEiJ_T0060914.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89637821 89640304 + Tpm3 protein_coding retained_intron MGP_WSBEiJ_T0060915.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89637951 89638428 + Tpm3 protein_coding retained_intron MGP_WSBEiJ_T0060916.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89637968 89639069 + Tpm3 protein_coding retained_intron MGP_WSBEiJ_T0060917.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89638573 89640539 + Tpm3 protein_coding retained_intron MGP_WSBEiJ_T0060918.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89640127 89640965 + Tpm3 protein_coding retained_intron MGP_WSBEiJ_T0060919.1 MGP_WSBEiJ_G0026696.1 mouse_genomes_project 3 89640555 89649257 + Tpm3 protein_coding processed_transcript MGP_WSBEiJ_T0007545.1 MGP_WSBEiJ_G0006176.1 mouse_genomes_project 3 109001724 109015792 + Gm42754 lincRNA lincRNA MGP_WSBEiJ_T0007438.1 MGP_WSBEiJ_G0006094.1 mouse_genomes_project 3 56341547 56389980 + 4921539H07Rik lincRNA lincRNA MGP_WSBEiJ_T0007440.1 MGP_WSBEiJ_G0006094.1 mouse_genomes_project 3 56388838 56392523 + 4921539H07Rik lincRNA lincRNA MGP_WSBEiJ_T0063418.1 MGP_WSBEiJ_G0027249.1 mouse_genomes_project 3 161077519 161110935 + MGP_WSBEiJ_P0063418 Lrrc40 protein_coding protein_coding MGP_WSBEiJ_T0063419.1 MGP_WSBEiJ_G0027249.1 mouse_genomes_project 3 161077557 161109537 + MGP_WSBEiJ_P0063419 Lrrc40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063420.1 MGP_WSBEiJ_G0027249.1 mouse_genomes_project 3 161077559 161109537 + MGP_WSBEiJ_P0063420 Lrrc40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063421.1 MGP_WSBEiJ_G0027249.1 mouse_genomes_project 3 161077579 161092617 + MGP_WSBEiJ_P0063421 Lrrc40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063422.1 MGP_WSBEiJ_G0027249.1 mouse_genomes_project 3 161077607 161092606 + MGP_WSBEiJ_P0063422 Lrrc40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063423.1 MGP_WSBEiJ_G0027249.1 mouse_genomes_project 3 161077717 161092552 + MGP_WSBEiJ_P0063423 Lrrc40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063424.1 MGP_WSBEiJ_G0027249.1 mouse_genomes_project 3 161103077 161108995 + Lrrc40 protein_coding retained_intron MGP_WSBEiJ_T0063425.1 MGP_WSBEiJ_G0027249.1 mouse_genomes_project 3 161103478 161104856 + Lrrc40 protein_coding retained_intron MGP_WSBEiJ_T0061614.1 MGP_WSBEiJ_G0026892.1 mouse_genomes_project 3 98903607 98904475 - MGP_WSBEiJ_P0061614 protein_coding protein_coding MGP_WSBEiJ_T0061251.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086751 95090833 + Sema6c protein_coding processed_transcript MGP_WSBEiJ_T0061252.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086788 95090718 + Sema6c protein_coding processed_transcript MGP_WSBEiJ_T0061253.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086788 95099939 + MGP_WSBEiJ_P0061253 Sema6c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061254.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086788 95094633 + MGP_WSBEiJ_P0061254 Sema6c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061255.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086795 95090772 + MGP_WSBEiJ_P0061255 Sema6c protein_coding protein_coding MGP_WSBEiJ_T0061256.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086799 95100310 + Sema6c protein_coding retained_intron MGP_WSBEiJ_T0061257.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086799 95100310 + MGP_WSBEiJ_P0061257 Sema6c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061258.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086799 95100310 + MGP_WSBEiJ_P0061258 Sema6c protein_coding protein_coding MGP_WSBEiJ_T0061259.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95086827 95099574 + MGP_WSBEiJ_P0061259 Sema6c protein_coding unknown_likely_coding MGP_WSBEiJ_T0061260.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95090596 95100148 + MGP_WSBEiJ_P0061260 Sema6c protein_coding protein_coding MGP_WSBEiJ_T0061261.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95090596 95100310 + MGP_WSBEiJ_P0061261 Sema6c protein_coding protein_coding MGP_WSBEiJ_T0061262.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95094498 95096426 + Sema6c protein_coding processed_transcript MGP_WSBEiJ_T0061263.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95096608 95098181 + Sema6c protein_coding retained_intron MGP_WSBEiJ_T0061264.1 MGP_WSBEiJ_G0026809.1 mouse_genomes_project 3 95097090 95098262 + Sema6c protein_coding retained_intron MGP_WSBEiJ_T0013821.1 MGP_WSBEiJ_G0011951.1 mouse_genomes_project 3 99417720 99418304 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013639.1 MGP_WSBEiJ_G0011769.1 mouse_genomes_project 3 40939373 40939444 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013795.1 MGP_WSBEiJ_G0011925.1 mouse_genomes_project 3 92889157 92889289 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060485.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87666545 87691264 + MGP_WSBEiJ_P0060485 Cct3 protein_coding protein_coding MGP_WSBEiJ_T0060486.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87666546 87668377 + Cct3 protein_coding retained_intron MGP_WSBEiJ_T0060487.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87666552 87691004 + Cct3 protein_coding retained_intron MGP_WSBEiJ_T0060488.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87666555 87683903 + Cct3 protein_coding retained_intron MGP_WSBEiJ_T0060489.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87666582 87691004 + Cct3 protein_coding retained_intron MGP_WSBEiJ_T0060490.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87666603 87691263 + MGP_WSBEiJ_P0060490 Cct3 protein_coding protein_coding MGP_WSBEiJ_T0060491.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87666617 87691004 + MGP_WSBEiJ_P0060491 Cct3 protein_coding protein_coding MGP_WSBEiJ_T0060492.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87672267 87690147 + MGP_WSBEiJ_P0060492 Cct3 protein_coding protein_coding MGP_WSBEiJ_T0060493.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87690491 87691261 + Cct3 protein_coding retained_intron MGP_WSBEiJ_T0060494.1 MGP_WSBEiJ_G0026630.1 mouse_genomes_project 3 87690544 87691262 + MGP_WSBEiJ_P0060494 Cct3 protein_coding protein_coding MGP_WSBEiJ_T0099414.1 MGP_WSBEiJ_G0038077.1 mouse_genomes_project 3 4279683 4279800 - Gm23592 snoRNA snoRNA MGP_WSBEiJ_T0060846.1 MGP_WSBEiJ_G0026689.1 mouse_genomes_project 3 89292616 89302913 + MGP_WSBEiJ_P0060846 Ube2q1 protein_coding protein_coding MGP_WSBEiJ_T0060847.1 MGP_WSBEiJ_G0026689.1 mouse_genomes_project 3 89292764 89296324 + Ube2q1 protein_coding retained_intron MGP_WSBEiJ_T0004121.1 MGP_WSBEiJ_G0003635.1 mouse_genomes_project 3 12532568 12533415 + Gm37468 antisense antisense MGP_WSBEiJ_T0007595.1 MGP_WSBEiJ_G0006216.1 mouse_genomes_project 3 136015109 136046866 + Gm43192 lincRNA lincRNA MGP_WSBEiJ_T0001164.1 MGP_WSBEiJ_G0001095.1 mouse_genomes_project 3 49887365 49890069 - TEC TEC MGP_WSBEiJ_T0013611.1 MGP_WSBEiJ_G0011741.1 mouse_genomes_project 3 33111068 33111504 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061694.1 MGP_WSBEiJ_G0026916.1 mouse_genomes_project 3 102465318 102469962 + MGP_WSBEiJ_P0061694 Nhlh2 protein_coding protein_coding MGP_WSBEiJ_T0061695.1 MGP_WSBEiJ_G0026916.1 mouse_genomes_project 3 102465388 102470737 + MGP_WSBEiJ_P0061695 Nhlh2 protein_coding protein_coding MGP_WSBEiJ_T0061696.1 MGP_WSBEiJ_G0026916.1 mouse_genomes_project 3 102465397 102469748 + MGP_WSBEiJ_P0061696 Nhlh2 protein_coding protein_coding MGP_WSBEiJ_T0013728.1 MGP_WSBEiJ_G0011858.1 mouse_genomes_project 3 66943899 66944484 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097210.1 MGP_WSBEiJ_G0035891.1 mouse_genomes_project 3 67736309 67736652 - Gm22009 scaRNA scaRNA MGP_WSBEiJ_T0004326.1 MGP_WSBEiJ_G0003773.1 mouse_genomes_project 3 155522986 155541185 + AI115009 antisense antisense MGP_WSBEiJ_T0007483.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87567481 87573356 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007484.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87567494 87587450 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007485.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87567978 87588007 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007486.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87571532 87586300 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007487.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87576549 87583879 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007488.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87576559 87588058 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007489.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87584683 87586314 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007490.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87586291 87591963 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007491.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87587944 87590022 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007492.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87590573 87591774 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0007493.1 MGP_WSBEiJ_G0006132.1 mouse_genomes_project 3 87590788 87591963 + Gm3764 lincRNA lincRNA MGP_WSBEiJ_T0001183.1 MGP_WSBEiJ_G0001113.1 mouse_genomes_project 3 53675391 53678784 + TEC TEC MGP_WSBEiJ_T0010369.1 MGP_WSBEiJ_G0008526.1 mouse_genomes_project 3 104194348 104194434 - Gm25325 miRNA miRNA MGP_WSBEiJ_T0013982.1 MGP_WSBEiJ_G0012112.1 mouse_genomes_project 3 158483288 158484078 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013620.1 MGP_WSBEiJ_G0011750.1 mouse_genomes_project 3 34736834 34737532 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013593.1 MGP_WSBEiJ_G0011723.1 mouse_genomes_project 3 23559143 23561110 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004248.1 MGP_WSBEiJ_G0003724.1 mouse_genomes_project 3 106060975 106072676 - Kcnd3os antisense antisense MGP_WSBEiJ_T0004249.1 MGP_WSBEiJ_G0003724.1 mouse_genomes_project 3 106069094 106075090 - Kcnd3os antisense antisense MGP_WSBEiJ_T0063207.1 MGP_WSBEiJ_G0027221.1 mouse_genomes_project 3 155033474 155065731 - Dnajb4 protein_coding processed_transcript MGP_WSBEiJ_T0063208.1 MGP_WSBEiJ_G0027221.1 mouse_genomes_project 3 155038916 155049347 - MGP_WSBEiJ_P0063208 Dnajb4 protein_coding protein_coding MGP_WSBEiJ_T0063209.1 MGP_WSBEiJ_G0027221.1 mouse_genomes_project 3 155038943 155065535 - MGP_WSBEiJ_P0063209 Dnajb4 protein_coding protein_coding MGP_WSBEiJ_T0063210.1 MGP_WSBEiJ_G0027221.1 mouse_genomes_project 3 155040036 155065471 - MGP_WSBEiJ_P0063210 Dnajb4 protein_coding protein_coding MGP_WSBEiJ_T0063211.1 MGP_WSBEiJ_G0027221.1 mouse_genomes_project 3 155048878 155065509 - Dnajb4 protein_coding processed_transcript MGP_WSBEiJ_T0063212.1 MGP_WSBEiJ_G0027221.1 mouse_genomes_project 3 155049064 155065509 - MGP_WSBEiJ_P0063212 Dnajb4 protein_coding protein_coding MGP_WSBEiJ_T0063213.1 MGP_WSBEiJ_G0027221.1 mouse_genomes_project 3 155060843 155065754 - Dnajb4 protein_coding retained_intron MGP_WSBEiJ_T0063157.1 MGP_WSBEiJ_G0027214.1 mouse_genomes_project 3 149431606 149521935 + Ttll7 protein_coding retained_intron MGP_WSBEiJ_T0063158.1 MGP_WSBEiJ_G0027214.1 mouse_genomes_project 3 149431606 149566274 + MGP_WSBEiJ_P0063158 Ttll7 protein_coding protein_coding MGP_WSBEiJ_T0063159.1 MGP_WSBEiJ_G0027214.1 mouse_genomes_project 3 149431606 149567529 + MGP_WSBEiJ_P0063159 Ttll7 protein_coding protein_coding MGP_WSBEiJ_T0063160.1 MGP_WSBEiJ_G0027214.1 mouse_genomes_project 3 149477520 149563269 + MGP_WSBEiJ_P0063160 Ttll7 protein_coding protein_coding MGP_WSBEiJ_T0063161.1 MGP_WSBEiJ_G0027214.1 mouse_genomes_project 3 149480001 149481851 + MGP_WSBEiJ_P0063161 Ttll7 protein_coding protein_coding MGP_WSBEiJ_T0063162.1 MGP_WSBEiJ_G0027214.1 mouse_genomes_project 3 149526927 149565448 + Ttll7 protein_coding retained_intron MGP_WSBEiJ_T0013553.1 MGP_WSBEiJ_G0011683.1 mouse_genomes_project 3 10707777 10708335 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059341.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30432574 30574171 - MGP_WSBEiJ_P0059341 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059342.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30432574 30573179 - MGP_WSBEiJ_P0059342 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059343.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30432574 30574171 - MGP_WSBEiJ_P0059343 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059344.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30432574 30574171 - MGP_WSBEiJ_P0059344 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059345.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30432574 30574171 - MGP_WSBEiJ_P0059345 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059346.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30432800 30574140 - MGP_WSBEiJ_P0059346 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059347.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30433120 30638746 - MGP_WSBEiJ_P0059347 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059348.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30433120 30574146 - MGP_WSBEiJ_P0059348 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059349.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30433796 30473489 - MGP_WSBEiJ_P0059349 Pex5l protein_coding protein_coding MGP_WSBEiJ_T0059350.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30437503 30638911 - Pex5l protein_coding retained_intron MGP_WSBEiJ_T0059351.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30626341 30638740 - Pex5l protein_coding processed_transcript MGP_WSBEiJ_T0059352.1 MGP_WSBEiJ_G0026387.1 mouse_genomes_project 3 30635653 30638847 - Pex5l protein_coding retained_intron MGP_WSBEiJ_T0059206.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27310136 27389696 - MGP_WSBEiJ_P0059206 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059207.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27310139 27903796 - MGP_WSBEiJ_P0059207 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059208.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27310146 27390045 - MGP_WSBEiJ_P0059208 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059209.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27310147 27517307 - MGP_WSBEiJ_P0059209 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059210.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27311407 27618160 - MGP_WSBEiJ_P0059210 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059211.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27311556 27373178 - MGP_WSBEiJ_P0059211 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059212.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27311622 27373217 - MGP_WSBEiJ_P0059212 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059213.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27321908 27903593 - MGP_WSBEiJ_P0059213 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059214.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27324268 27903885 - MGP_WSBEiJ_P0059214 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059215.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27337155 27942337 - MGP_WSBEiJ_P0059215 Mecom protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059216.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27343744 27389601 - Mecom protein_coding processed_transcript MGP_WSBEiJ_T0059217.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27343744 27389744 - Mecom protein_coding retained_intron MGP_WSBEiJ_T0059218.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27373243 27387977 - MGP_WSBEiJ_P0059218 Mecom protein_coding protein_coding MGP_WSBEiJ_T0059219.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27392298 27903796 - Mecom protein_coding processed_transcript MGP_WSBEiJ_T0059220.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27615434 27617958 - Mecom protein_coding retained_intron MGP_WSBEiJ_T0059221.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27616560 27903566 - Mecom protein_coding processed_transcript MGP_WSBEiJ_T0059222.1 MGP_WSBEiJ_G0026362.1 mouse_genomes_project 3 27617969 27618317 - MGP_WSBEiJ_P0059222 Mecom protein_coding protein_coding MGP_WSBEiJ_T0062792.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137229387 137255045 + MGP_WSBEiJ_P0062792 Slc9b1 protein_coding protein_coding MGP_WSBEiJ_T0062793.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137229392 137281565 + MGP_WSBEiJ_P0062793 Slc9b1 protein_coding protein_coding MGP_WSBEiJ_T0062794.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137229404 137239400 + Slc9b1 protein_coding retained_intron MGP_WSBEiJ_T0062795.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137229404 137239639 + Slc9b1 protein_coding retained_intron MGP_WSBEiJ_T0062796.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137229416 137276826 + Slc9b1 protein_coding processed_transcript MGP_WSBEiJ_T0062797.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137229452 137281642 + MGP_WSBEiJ_P0062797 Slc9b1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062798.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137229456 137281491 + MGP_WSBEiJ_P0062798 Slc9b1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062799.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137229688 137258077 + Slc9b1 protein_coding retained_intron MGP_WSBEiJ_T0062800.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137256215 137257796 + Slc9b1 protein_coding retained_intron MGP_WSBEiJ_T0062801.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137265852 137281562 + MGP_WSBEiJ_P0062801 Slc9b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062802.1 MGP_WSBEiJ_G0027140.1 mouse_genomes_project 3 137277745 137281562 + Slc9b1 protein_coding processed_transcript MGP_WSBEiJ_T0063114.1 MGP_WSBEiJ_G0027205.1 mouse_genomes_project 3 148997980 149001121 + Ctbs protein_coding retained_intron MGP_WSBEiJ_T0063115.1 MGP_WSBEiJ_G0027205.1 mouse_genomes_project 3 148998655 149014596 + MGP_WSBEiJ_P0063115 Ctbs protein_coding protein_coding MGP_WSBEiJ_T0063116.1 MGP_WSBEiJ_G0027205.1 mouse_genomes_project 3 148998663 149005523 + MGP_WSBEiJ_P0063116 Ctbs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063117.1 MGP_WSBEiJ_G0027205.1 mouse_genomes_project 3 148998678 149014552 + MGP_WSBEiJ_P0063117 Ctbs protein_coding protein_coding MGP_WSBEiJ_T0097348.1 MGP_WSBEiJ_G0036022.1 mouse_genomes_project 3 102600435 102603316 + 4632404M16Rik sense_intronic sense_intronic MGP_WSBEiJ_T0097338.1 MGP_WSBEiJ_G0036012.1 mouse_genomes_project 3 100950088 100955303 - Gm43466 sense_intronic sense_intronic MGP_WSBEiJ_T0013967.1 MGP_WSBEiJ_G0012097.1 mouse_genomes_project 3 147249424 147250061 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061119.1 MGP_WSBEiJ_G0026788.1 mouse_genomes_project 3 94248495 94252009 + Mrpl9 protein_coding retained_intron MGP_WSBEiJ_T0061120.1 MGP_WSBEiJ_G0026788.1 mouse_genomes_project 3 94248502 94253876 + MGP_WSBEiJ_P0061120 Mrpl9 protein_coding protein_coding MGP_WSBEiJ_T0061121.1 MGP_WSBEiJ_G0026788.1 mouse_genomes_project 3 94248514 94256238 + MGP_WSBEiJ_P0061121 Mrpl9 protein_coding protein_coding MGP_WSBEiJ_T0060116.1 MGP_WSBEiJ_G0026542.1 mouse_genomes_project 3 71663676 71746502 - MGP_WSBEiJ_P0060116 Sis protein_coding protein_coding MGP_WSBEiJ_T0060117.1 MGP_WSBEiJ_G0026542.1 mouse_genomes_project 3 71663679 71745584 - MGP_WSBEiJ_P0060117 Sis protein_coding protein_coding MGP_WSBEiJ_T0060118.1 MGP_WSBEiJ_G0026542.1 mouse_genomes_project 3 71728520 71729676 - Sis protein_coding retained_intron MGP_WSBEiJ_T0060119.1 MGP_WSBEiJ_G0026542.1 mouse_genomes_project 3 71743730 71746499 - Sis protein_coding retained_intron MGP_WSBEiJ_T0007598.1 MGP_WSBEiJ_G0006218.1 mouse_genomes_project 3 136282967 136304262 - 4930539C22Rik lincRNA lincRNA MGP_WSBEiJ_T0010371.1 MGP_WSBEiJ_G0008528.1 mouse_genomes_project 3 109882801 109882918 + Gm44384 miRNA miRNA MGP_WSBEiJ_T0059278.1 MGP_WSBEiJ_G0026376.1 mouse_genomes_project 3 29342849 29632828 + MGP_WSBEiJ_P0059278 Kcnmb2 protein_coding protein_coding MGP_WSBEiJ_T0059279.1 MGP_WSBEiJ_G0026376.1 mouse_genomes_project 3 29343016 29632828 + MGP_WSBEiJ_P0059279 Kcnmb2 protein_coding protein_coding MGP_WSBEiJ_T0059280.1 MGP_WSBEiJ_G0026376.1 mouse_genomes_project 3 29343038 29632830 + MGP_WSBEiJ_P0059280 Kcnmb2 protein_coding protein_coding MGP_WSBEiJ_T0059281.1 MGP_WSBEiJ_G0026376.1 mouse_genomes_project 3 29343045 29633241 + MGP_WSBEiJ_P0059281 Kcnmb2 protein_coding protein_coding MGP_WSBEiJ_T0059282.1 MGP_WSBEiJ_G0026376.1 mouse_genomes_project 3 29343045 29633243 + MGP_WSBEiJ_P0059282 Kcnmb2 protein_coding protein_coding MGP_WSBEiJ_T0059283.1 MGP_WSBEiJ_G0026376.1 mouse_genomes_project 3 29595838 29631420 + MGP_WSBEiJ_P0059283 Kcnmb2 protein_coding protein_coding MGP_WSBEiJ_T0007563.1 MGP_WSBEiJ_G0006190.1 mouse_genomes_project 3 123034421 123042980 - A730020M07Rik lincRNA lincRNA MGP_WSBEiJ_T0007564.1 MGP_WSBEiJ_G0006190.1 mouse_genomes_project 3 123036622 123042983 - A730020M07Rik lincRNA lincRNA MGP_WSBEiJ_T0007565.1 MGP_WSBEiJ_G0006190.1 mouse_genomes_project 3 123036624 123042865 - A730020M07Rik lincRNA lincRNA MGP_WSBEiJ_T0062016.1 MGP_WSBEiJ_G0026988.1 mouse_genomes_project 3 108294800 108296199 - MGP_WSBEiJ_P0062016 Ubl4b protein_coding protein_coding MGP_WSBEiJ_T0013891.1 MGP_WSBEiJ_G0012021.1 mouse_genomes_project 3 122531193 122532188 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001151.1 MGP_WSBEiJ_G0001083.1 mouse_genomes_project 3 49222894 49226953 + TEC TEC MGP_WSBEiJ_T0062852.1 MGP_WSBEiJ_G0027148.1 mouse_genomes_project 3 138634736 138770675 + Ppp3ca protein_coding processed_transcript MGP_WSBEiJ_T0062853.1 MGP_WSBEiJ_G0027148.1 mouse_genomes_project 3 138634736 138918206 + MGP_WSBEiJ_P0062853 Ppp3ca protein_coding protein_coding MGP_WSBEiJ_T0062854.1 MGP_WSBEiJ_G0027148.1 mouse_genomes_project 3 138635382 138916259 + MGP_WSBEiJ_P0062854 Ppp3ca protein_coding protein_coding MGP_WSBEiJ_T0062855.1 MGP_WSBEiJ_G0027148.1 mouse_genomes_project 3 138811578 138861030 + Ppp3ca protein_coding processed_transcript MGP_WSBEiJ_T0062856.1 MGP_WSBEiJ_G0027148.1 mouse_genomes_project 3 138859963 138862610 + Ppp3ca protein_coding retained_intron MGP_WSBEiJ_T0062857.1 MGP_WSBEiJ_G0027148.1 mouse_genomes_project 3 138867516 138869554 + Ppp3ca protein_coding retained_intron MGP_WSBEiJ_T0062858.1 MGP_WSBEiJ_G0027148.1 mouse_genomes_project 3 138881924 138909103 + Ppp3ca protein_coding processed_transcript MGP_WSBEiJ_T0062859.1 MGP_WSBEiJ_G0027148.1 mouse_genomes_project 3 138882740 138885249 + Ppp3ca protein_coding retained_intron MGP_WSBEiJ_T0099467.1 MGP_WSBEiJ_G0038130.1 mouse_genomes_project 3 115907462 115907594 - Gm23750 snoRNA snoRNA MGP_WSBEiJ_T0059097.1 MGP_WSBEiJ_G0026341.1 mouse_genomes_project 3 17219619 17254645 - MGP_WSBEiJ_P0059097 Gyg protein_coding protein_coding MGP_WSBEiJ_T0059098.1 MGP_WSBEiJ_G0026341.1 mouse_genomes_project 3 17219622 17254424 - MGP_WSBEiJ_P0059098 Gyg protein_coding protein_coding MGP_WSBEiJ_T0059099.1 MGP_WSBEiJ_G0026341.1 mouse_genomes_project 3 17219682 17254397 - MGP_WSBEiJ_P0059099 Gyg protein_coding protein_coding MGP_WSBEiJ_T0059100.1 MGP_WSBEiJ_G0026341.1 mouse_genomes_project 3 17220091 17221079 - Gyg protein_coding retained_intron MGP_WSBEiJ_T0013980.1 MGP_WSBEiJ_G0012110.1 mouse_genomes_project 3 155742658 155742825 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059197.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26390606 26459122 + MGP_WSBEiJ_P0059197 Egfem1 protein_coding protein_coding MGP_WSBEiJ_T0059198.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26390883 26925574 + MGP_WSBEiJ_P0059198 Egfem1 protein_coding protein_coding MGP_WSBEiJ_T0059199.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26391146 27016229 + Egfem1 protein_coding retained_intron MGP_WSBEiJ_T0059200.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26391302 27031024 + MGP_WSBEiJ_P0059200 Egfem1 protein_coding protein_coding MGP_WSBEiJ_T0059201.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26391340 27030325 + MGP_WSBEiJ_P0059201 Egfem1 protein_coding protein_coding MGP_WSBEiJ_T0059202.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26391419 26482217 + MGP_WSBEiJ_P0059202 Egfem1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0059203.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26803029 26991838 + Egfem1 protein_coding processed_transcript MGP_WSBEiJ_T0059204.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26859777 27030863 + MGP_WSBEiJ_P0059204 Egfem1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0059205.1 MGP_WSBEiJ_G0026361.1 mouse_genomes_project 3 26859802 27015336 + MGP_WSBEiJ_P0059205 Egfem1 protein_coding protein_coding MGP_WSBEiJ_T0059660.1 MGP_WSBEiJ_G0026437.1 mouse_genomes_project 3 49386365 49394342 - MGP_WSBEiJ_P0059660 Mgarp protein_coding protein_coding MGP_WSBEiJ_T0059661.1 MGP_WSBEiJ_G0026437.1 mouse_genomes_project 3 49386365 49394532 - MGP_WSBEiJ_P0059661 Mgarp protein_coding protein_coding MGP_WSBEiJ_T0059662.1 MGP_WSBEiJ_G0026437.1 mouse_genomes_project 3 49386365 49394320 - MGP_WSBEiJ_P0059662 Mgarp protein_coding protein_coding MGP_WSBEiJ_T0059663.1 MGP_WSBEiJ_G0026437.1 mouse_genomes_project 3 49388754 49394297 - Mgarp protein_coding retained_intron MGP_WSBEiJ_T0059664.1 MGP_WSBEiJ_G0026437.1 mouse_genomes_project 3 49389195 49394282 - Mgarp protein_coding processed_transcript MGP_WSBEiJ_T0001355.1 MGP_WSBEiJ_G0001284.1 mouse_genomes_project 3 158044958 158047746 + TEC TEC MGP_WSBEiJ_T0097353.1 MGP_WSBEiJ_G0036027.1 mouse_genomes_project 3 104296430 104297852 - Gm43149 sense_intronic sense_intronic MGP_WSBEiJ_T0013892.1 MGP_WSBEiJ_G0012022.1 mouse_genomes_project 3 122602520 122603124 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010373.1 MGP_WSBEiJ_G0008530.1 mouse_genomes_project 3 118537153 118537218 + Gm22408 miRNA miRNA MGP_WSBEiJ_T0059021.1 MGP_WSBEiJ_G0026322.1 mouse_genomes_project 3 12262184 12300077 - MGP_WSBEiJ_P0059021 Gm9733 protein_coding protein_coding MGP_WSBEiJ_T0001239.1 MGP_WSBEiJ_G0001169.1 mouse_genomes_project 3 97358197 97362350 + TEC TEC MGP_WSBEiJ_T0001303.1 MGP_WSBEiJ_G0001233.1 mouse_genomes_project 3 129383104 129385081 - TEC TEC MGP_WSBEiJ_T0004298.1 MGP_WSBEiJ_G0003755.1 mouse_genomes_project 3 133163527 133179270 + 4930534D22Rik antisense antisense MGP_WSBEiJ_T0017388.1 MGP_WSBEiJ_G0014938.1 mouse_genomes_project 3 106601979 106627122 + Gm42890 processed_transcript retained_intron MGP_WSBEiJ_T0017389.1 MGP_WSBEiJ_G0014938.1 mouse_genomes_project 3 106608584 106618879 + Gm42890 processed_transcript retained_intron MGP_WSBEiJ_T0059527.1 MGP_WSBEiJ_G0026415.1 mouse_genomes_project 3 35311832 35316524 + MGP_WSBEiJ_P0059527 Spry1 protein_coding protein_coding MGP_WSBEiJ_T0059528.1 MGP_WSBEiJ_G0026415.1 mouse_genomes_project 3 35311843 35316524 + MGP_WSBEiJ_P0059528 Spry1 protein_coding protein_coding MGP_WSBEiJ_T0059529.1 MGP_WSBEiJ_G0026415.1 mouse_genomes_project 3 35311965 35316524 + MGP_WSBEiJ_P0059529 Spry1 protein_coding protein_coding MGP_WSBEiJ_T0013671.1 MGP_WSBEiJ_G0011801.1 mouse_genomes_project 3 49368179 49368564 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013889.1 MGP_WSBEiJ_G0012019.1 mouse_genomes_project 3 121095473 121095651 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058963.1 MGP_WSBEiJ_G0026303.1 mouse_genomes_project 3 7096951 7114378 - MGP_WSBEiJ_P0058963 Gm37389 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001293.1 MGP_WSBEiJ_G0001223.1 mouse_genomes_project 3 128598501 128599394 - TEC TEC MGP_WSBEiJ_T0061146.1 MGP_WSBEiJ_G0026792.1 mouse_genomes_project 3 94425184 94615531 - MGP_WSBEiJ_P0061146 Tuft1 protein_coding protein_coding MGP_WSBEiJ_T0061147.1 MGP_WSBEiJ_G0026792.1 mouse_genomes_project 3 94425186 94615532 - MGP_WSBEiJ_P0061147 Tuft1 protein_coding protein_coding MGP_WSBEiJ_T0061148.1 MGP_WSBEiJ_G0026792.1 mouse_genomes_project 3 94425423 94615460 - MGP_WSBEiJ_P0061148 Tuft1 protein_coding protein_coding MGP_WSBEiJ_T0061149.1 MGP_WSBEiJ_G0026792.1 mouse_genomes_project 3 94426595 94427733 - Tuft1 protein_coding retained_intron MGP_WSBEiJ_T0061150.1 MGP_WSBEiJ_G0026792.1 mouse_genomes_project 3 94435521 94615460 - MGP_WSBEiJ_P0061150 Tuft1 protein_coding protein_coding MGP_WSBEiJ_T0061151.1 MGP_WSBEiJ_G0026792.1 mouse_genomes_project 3 94562907 94615463 - MGP_WSBEiJ_P0061151 Tuft1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061615.1 MGP_WSBEiJ_G0026893.1 mouse_genomes_project 3 98903616 98904475 - MGP_WSBEiJ_P0061615 protein_coding protein_coding MGP_WSBEiJ_T0059882.1 MGP_WSBEiJ_G0026484.1 mouse_genomes_project 3 57369012 57374391 - MGP_WSBEiJ_P0059882 Gpr171 protein_coding protein_coding MGP_WSBEiJ_T0061044.1 MGP_WSBEiJ_G0026743.1 mouse_genomes_project 3 92209265 92212140 - MGP_WSBEiJ_P0061044 Sprr3 protein_coding protein_coding MGP_WSBEiJ_T0001330.1 MGP_WSBEiJ_G0001259.1 mouse_genomes_project 3 138667809 138669332 + TEC TEC MGP_WSBEiJ_T0061016.1 MGP_WSBEiJ_G0026722.1 mouse_genomes_project 3 90288818 90289886 + MGP_WSBEiJ_P0061016 S100a8 protein_coding protein_coding MGP_WSBEiJ_T0061017.1 MGP_WSBEiJ_G0026722.1 mouse_genomes_project 3 90289153 90289815 + S100a8 protein_coding retained_intron MGP_WSBEiJ_T0061500.1 MGP_WSBEiJ_G0026864.1 mouse_genomes_project 3 96703209 96724221 + MGP_WSBEiJ_P0061500 Itga10 protein_coding protein_coding MGP_WSBEiJ_T0061501.1 MGP_WSBEiJ_G0026864.1 mouse_genomes_project 3 96703209 96724215 + MGP_WSBEiJ_P0061501 Itga10 protein_coding protein_coding MGP_WSBEiJ_T0061502.1 MGP_WSBEiJ_G0026864.1 mouse_genomes_project 3 96716259 96722889 + Itga10 protein_coding retained_intron MGP_WSBEiJ_T0007573.1 MGP_WSBEiJ_G0006196.1 mouse_genomes_project 3 126358621 126466764 + Gm42825 lincRNA lincRNA MGP_WSBEiJ_T0007495.1 MGP_WSBEiJ_G0006134.1 mouse_genomes_project 3 89286415 89292145 - 4632404H12Rik lincRNA lincRNA MGP_WSBEiJ_T0007496.1 MGP_WSBEiJ_G0006134.1 mouse_genomes_project 3 89287025 89291696 - 4632404H12Rik lincRNA lincRNA MGP_WSBEiJ_T0007507.1 MGP_WSBEiJ_G0006144.1 mouse_genomes_project 3 96268264 96274342 + Gm42743 lincRNA lincRNA MGP_WSBEiJ_T0013666.1 MGP_WSBEiJ_G0011796.1 mouse_genomes_project 3 47661954 47662374 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100800.1 MGP_WSBEiJ_G0039258.1 mouse_genomes_project 3 108654098 108658566 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0059253.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28306543 28379580 - MGP_WSBEiJ_P0059253 Phc3 protein_coding protein_coding MGP_WSBEiJ_T0059254.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28306696 28379584 - MGP_WSBEiJ_P0059254 Phc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059255.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28313957 28379584 - MGP_WSBEiJ_P0059255 Phc3 protein_coding protein_coding MGP_WSBEiJ_T0059256.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28314158 28379584 - MGP_WSBEiJ_P0059256 Phc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059257.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28314484 28379578 - MGP_WSBEiJ_P0059257 Phc3 protein_coding protein_coding MGP_WSBEiJ_T0059258.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28314484 28379578 - MGP_WSBEiJ_P0059258 Phc3 protein_coding protein_coding MGP_WSBEiJ_T0059259.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28314484 28379578 - MGP_WSBEiJ_P0059259 Phc3 protein_coding protein_coding MGP_WSBEiJ_T0059260.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28328568 28342197 - Phc3 protein_coding retained_intron MGP_WSBEiJ_T0059261.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28338213 28379594 - MGP_WSBEiJ_P0059261 Phc3 protein_coding protein_coding MGP_WSBEiJ_T0059262.1 MGP_WSBEiJ_G0026371.1 mouse_genomes_project 3 28368566 28376124 - Phc3 protein_coding retained_intron MGP_WSBEiJ_T0061602.1 MGP_WSBEiJ_G0026886.1 mouse_genomes_project 3 98396404 98411080 + MGP_WSBEiJ_P0061602 Reg4 protein_coding protein_coding MGP_WSBEiJ_T0062498.1 MGP_WSBEiJ_G0027088.1 mouse_genomes_project 3 125830121 125834010 + MGP_WSBEiJ_P0062498 Tram1l1 protein_coding protein_coding MGP_WSBEiJ_T0062386.1 MGP_WSBEiJ_G0027067.1 mouse_genomes_project 3 122807869 122847698 + Cnn3 protein_coding retained_intron MGP_WSBEiJ_T0062387.1 MGP_WSBEiJ_G0027067.1 mouse_genomes_project 3 122808096 122846914 + MGP_WSBEiJ_P0062387 Cnn3 protein_coding protein_coding MGP_WSBEiJ_T0062388.1 MGP_WSBEiJ_G0027067.1 mouse_genomes_project 3 122808606 122835353 + Cnn3 protein_coding processed_transcript MGP_WSBEiJ_T0062389.1 MGP_WSBEiJ_G0027067.1 mouse_genomes_project 3 122838450 122846911 + Cnn3 protein_coding retained_intron MGP_WSBEiJ_T0013770.1 MGP_WSBEiJ_G0011900.1 mouse_genomes_project 3 83756994 83757892 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013633.1 MGP_WSBEiJ_G0011763.1 mouse_genomes_project 3 38504955 38505226 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007469.1 MGP_WSBEiJ_G0006119.1 mouse_genomes_project 3 80890752 80893861 + A830029E22Rik lincRNA lincRNA MGP_WSBEiJ_T0013637.1 MGP_WSBEiJ_G0011767.1 mouse_genomes_project 3 40274635 40275122 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007408.1 MGP_WSBEiJ_G0006074.1 mouse_genomes_project 3 39129286 39133607 - Gm42434 lincRNA lincRNA MGP_WSBEiJ_T0007409.1 MGP_WSBEiJ_G0006074.1 mouse_genomes_project 3 39133482 39134113 - Gm42434 lincRNA lincRNA MGP_WSBEiJ_T0013570.1 MGP_WSBEiJ_G0011700.1 mouse_genomes_project 3 14715857 14716197 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013759.1 MGP_WSBEiJ_G0011889.1 mouse_genomes_project 3 77779526 77780371 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061655.1 MGP_WSBEiJ_G0026905.1 mouse_genomes_project 3 100930397 101058183 - MGP_WSBEiJ_P0061655 Man1a2 protein_coding protein_coding MGP_WSBEiJ_T0061656.1 MGP_WSBEiJ_G0026905.1 mouse_genomes_project 3 100955685 101024327 - Man1a2 protein_coding processed_transcript MGP_WSBEiJ_T0061657.1 MGP_WSBEiJ_G0026905.1 mouse_genomes_project 3 100989368 101057291 - MGP_WSBEiJ_P0061657 Man1a2 protein_coding protein_coding MGP_WSBEiJ_T0061658.1 MGP_WSBEiJ_G0026905.1 mouse_genomes_project 3 101014991 101057805 - MGP_WSBEiJ_P0061658 Man1a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061659.1 MGP_WSBEiJ_G0026905.1 mouse_genomes_project 3 101027795 101057988 - Man1a2 protein_coding processed_transcript MGP_WSBEiJ_T0061660.1 MGP_WSBEiJ_G0026905.1 mouse_genomes_project 3 101057271 101058139 - Man1a2 protein_coding processed_transcript MGP_WSBEiJ_T0004233.1 MGP_WSBEiJ_G0003714.1 mouse_genomes_project 3 99582434 99591222 - Gm43120 antisense antisense MGP_WSBEiJ_T0062883.1 MGP_WSBEiJ_G0027155.1 mouse_genomes_project 3 139953409 140008096 - MGP_WSBEiJ_P0062883 Dapp1 protein_coding protein_coding MGP_WSBEiJ_T0062884.1 MGP_WSBEiJ_G0027155.1 mouse_genomes_project 3 139953410 140008087 - MGP_WSBEiJ_P0062884 Dapp1 protein_coding protein_coding MGP_WSBEiJ_T0062885.1 MGP_WSBEiJ_G0027155.1 mouse_genomes_project 3 139955128 139979043 - Dapp1 protein_coding processed_transcript MGP_WSBEiJ_T0062886.1 MGP_WSBEiJ_G0027155.1 mouse_genomes_project 3 139955431 139977887 - Dapp1 protein_coding processed_transcript MGP_WSBEiJ_T0062887.1 MGP_WSBEiJ_G0027155.1 mouse_genomes_project 3 139955549 140008081 - Dapp1 protein_coding processed_transcript MGP_WSBEiJ_T0062888.1 MGP_WSBEiJ_G0027155.1 mouse_genomes_project 3 139972859 139977887 - Dapp1 protein_coding processed_transcript MGP_WSBEiJ_T0062889.1 MGP_WSBEiJ_G0027155.1 mouse_genomes_project 3 140007255 140008087 - Dapp1 protein_coding retained_intron MGP_WSBEiJ_T0059830.1 MGP_WSBEiJ_G0026470.1 mouse_genomes_project 3 55622453 55638701 + MGP_WSBEiJ_P0059830 Tm4sf4 protein_coding protein_coding MGP_WSBEiJ_T0013905.1 MGP_WSBEiJ_G0012035.1 mouse_genomes_project 3 125807187 125807434 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001195.1 MGP_WSBEiJ_G0001125.1 mouse_genomes_project 3 57550554 57552097 + TEC TEC MGP_WSBEiJ_T0062333.1 MGP_WSBEiJ_G0027057.1 mouse_genomes_project 3 118109812 118165508 - MGP_WSBEiJ_P0062333 Palmd protein_coding protein_coding MGP_WSBEiJ_T0062334.1 MGP_WSBEiJ_G0027057.1 mouse_genomes_project 3 118113176 118165379 - MGP_WSBEiJ_P0062334 Palmd protein_coding protein_coding MGP_WSBEiJ_T0062335.1 MGP_WSBEiJ_G0027057.1 mouse_genomes_project 3 118118850 118165507 - MGP_WSBEiJ_P0062335 Palmd protein_coding protein_coding MGP_WSBEiJ_T0062336.1 MGP_WSBEiJ_G0027057.1 mouse_genomes_project 3 118161565 118165264 - Palmd protein_coding retained_intron MGP_WSBEiJ_T0013544.1 MGP_WSBEiJ_G0011674.1 mouse_genomes_project 3 7696944 7697455 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007475.1 MGP_WSBEiJ_G0006124.1 mouse_genomes_project 3 82539731 82542110 + Gm38096 lincRNA lincRNA MGP_WSBEiJ_T0004238.1 MGP_WSBEiJ_G0003717.1 mouse_genomes_project 3 102672450 102674634 + Gm16160 antisense antisense MGP_WSBEiJ_T0099450.1 MGP_WSBEiJ_G0038113.1 mouse_genomes_project 3 86375841 86375973 + Gm24472 snoRNA snoRNA MGP_WSBEiJ_T0007613.1 MGP_WSBEiJ_G0006232.1 mouse_genomes_project 3 143121048 143122420 + 4930590L14Rik lincRNA lincRNA MGP_WSBEiJ_T0062874.1 MGP_WSBEiJ_G0027153.1 mouse_genomes_project 3 139888620 139938625 + MGP_WSBEiJ_P0062874 Dnajb14 protein_coding protein_coding MGP_WSBEiJ_T0062875.1 MGP_WSBEiJ_G0027153.1 mouse_genomes_project 3 139888832 139918599 + Dnajb14 protein_coding retained_intron MGP_WSBEiJ_T0062876.1 MGP_WSBEiJ_G0027153.1 mouse_genomes_project 3 139889126 139924814 + MGP_WSBEiJ_P0062876 Dnajb14 protein_coding protein_coding MGP_WSBEiJ_T0062877.1 MGP_WSBEiJ_G0027153.1 mouse_genomes_project 3 139927784 139931451 + Dnajb14 protein_coding retained_intron MGP_WSBEiJ_T0061702.1 MGP_WSBEiJ_G0026918.1 mouse_genomes_project 3 102619184 102673188 - MGP_WSBEiJ_P0061702 Vangl1 protein_coding protein_coding MGP_WSBEiJ_T0061703.1 MGP_WSBEiJ_G0026918.1 mouse_genomes_project 3 102619232 102673023 - MGP_WSBEiJ_P0061703 Vangl1 protein_coding protein_coding MGP_WSBEiJ_T0061704.1 MGP_WSBEiJ_G0026918.1 mouse_genomes_project 3 102623789 102634400 - MGP_WSBEiJ_P0061704 Vangl1 protein_coding protein_coding MGP_WSBEiJ_T0061705.1 MGP_WSBEiJ_G0026918.1 mouse_genomes_project 3 102623792 102672458 - MGP_WSBEiJ_P0061705 Vangl1 protein_coding protein_coding MGP_WSBEiJ_T0061706.1 MGP_WSBEiJ_G0026918.1 mouse_genomes_project 3 102629314 102634443 - Vangl1 protein_coding retained_intron MGP_WSBEiJ_T0061707.1 MGP_WSBEiJ_G0026918.1 mouse_genomes_project 3 102629491 102633408 - Vangl1 protein_coding processed_transcript MGP_WSBEiJ_T0061708.1 MGP_WSBEiJ_G0026918.1 mouse_genomes_project 3 102652917 102666428 - MGP_WSBEiJ_P0061708 Vangl1 protein_coding protein_coding MGP_WSBEiJ_T0061709.1 MGP_WSBEiJ_G0026918.1 mouse_genomes_project 3 102665345 102672376 - MGP_WSBEiJ_P0061709 Vangl1 protein_coding protein_coding MGP_WSBEiJ_T0010365.1 MGP_WSBEiJ_G0008522.1 mouse_genomes_project 3 95698571 95698634 - Mir7014 miRNA miRNA MGP_WSBEiJ_T0010393.1 MGP_WSBEiJ_G0008550.1 mouse_genomes_project 3 153820330 153820401 - Mir3963 miRNA miRNA MGP_WSBEiJ_T0061520.1 MGP_WSBEiJ_G0026868.1 mouse_genomes_project 3 96776462 96793098 - MGP_WSBEiJ_P0061520 Polr3c protein_coding protein_coding MGP_WSBEiJ_T0061521.1 MGP_WSBEiJ_G0026868.1 mouse_genomes_project 3 96776495 96792911 - MGP_WSBEiJ_P0061521 Polr3c protein_coding protein_coding MGP_WSBEiJ_T0061522.1 MGP_WSBEiJ_G0026868.1 mouse_genomes_project 3 96781423 96789257 - MGP_WSBEiJ_P0061522 Polr3c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061523.1 MGP_WSBEiJ_G0026868.1 mouse_genomes_project 3 96784160 96792946 - Polr3c protein_coding retained_intron MGP_WSBEiJ_T0061524.1 MGP_WSBEiJ_G0026868.1 mouse_genomes_project 3 96788857 96792924 - MGP_WSBEiJ_P0061524 Polr3c protein_coding protein_coding MGP_WSBEiJ_T0061525.1 MGP_WSBEiJ_G0026868.1 mouse_genomes_project 3 96788860 96792945 - MGP_WSBEiJ_P0061525 Polr3c protein_coding protein_coding MGP_WSBEiJ_T0013515.1 MGP_WSBEiJ_G0011645.1 mouse_genomes_project 3 528730 529046 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063005.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145086969 145176517 - MGP_WSBEiJ_P0063005 Pkn2 protein_coding protein_coding MGP_WSBEiJ_T0063006.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145089774 145176428 - MGP_WSBEiJ_P0063006 Pkn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063007.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145089876 145176171 - MGP_WSBEiJ_P0063007 Pkn2 protein_coding protein_coding MGP_WSBEiJ_T0063008.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145089876 145176171 - MGP_WSBEiJ_P0063008 Pkn2 protein_coding protein_coding MGP_WSBEiJ_T0063009.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145096019 145176433 - Pkn2 protein_coding processed_transcript MGP_WSBEiJ_T0063010.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145096101 145099123 - Pkn2 protein_coding retained_intron MGP_WSBEiJ_T0063011.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145101911 145176503 - Pkn2 protein_coding processed_transcript MGP_WSBEiJ_T0063012.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145107247 145119199 - MGP_WSBEiJ_P0063012 Pkn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063013.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145108364 145110188 - Pkn2 protein_coding retained_intron MGP_WSBEiJ_T0063014.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145109158 145126913 - MGP_WSBEiJ_P0063014 Pkn2 protein_coding protein_coding MGP_WSBEiJ_T0063015.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145118909 145126876 - Pkn2 protein_coding retained_intron MGP_WSBEiJ_T0063016.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145127859 145176496 - Pkn2 protein_coding retained_intron MGP_WSBEiJ_T0063017.1 MGP_WSBEiJ_G0027182.1 mouse_genomes_project 3 145146288 145149081 - Pkn2 protein_coding retained_intron MGP_WSBEiJ_T0061950.1 MGP_WSBEiJ_G0026970.1 mouse_genomes_project 3 107112868 107130928 - MGP_WSBEiJ_P0061950 Chil6 protein_coding protein_coding MGP_WSBEiJ_T0062731.1 MGP_WSBEiJ_G0027128.1 mouse_genomes_project 3 134523029 134681134 + MGP_WSBEiJ_P0062731 Tbck protein_coding protein_coding MGP_WSBEiJ_T0062732.1 MGP_WSBEiJ_G0027128.1 mouse_genomes_project 3 134523053 134538597 + Tbck protein_coding retained_intron MGP_WSBEiJ_T0062733.1 MGP_WSBEiJ_G0027128.1 mouse_genomes_project 3 134523085 134641523 + Tbck protein_coding processed_transcript MGP_WSBEiJ_T0062734.1 MGP_WSBEiJ_G0027128.1 mouse_genomes_project 3 134631593 134678002 + Tbck protein_coding processed_transcript MGP_WSBEiJ_T0013750.1 MGP_WSBEiJ_G0011880.1 mouse_genomes_project 3 75801593 75801934 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061609.1 MGP_WSBEiJ_G0026889.1 mouse_genomes_project 3 98569709 99056405 + Zfp697 protein_coding processed_transcript MGP_WSBEiJ_T0061610.1 MGP_WSBEiJ_G0026889.1 mouse_genomes_project 3 98569729 98854456 + MGP_WSBEiJ_P0061610 Zfp697 protein_coding protein_coding MGP_WSBEiJ_T0061611.1 MGP_WSBEiJ_G0026889.1 mouse_genomes_project 3 98569796 98612152 + MGP_WSBEiJ_P0061611 Zfp697 protein_coding protein_coding MGP_WSBEiJ_T0062084.1 MGP_WSBEiJ_G0027004.1 mouse_genomes_project 3 108874905 108915852 - MGP_WSBEiJ_P0062084 Gnai3 protein_coding protein_coding MGP_WSBEiJ_T0004120.1 MGP_WSBEiJ_G0003634.1 mouse_genomes_project 3 4383247 4466909 + Gm16685 antisense antisense MGP_WSBEiJ_T0013936.1 MGP_WSBEiJ_G0012066.1 mouse_genomes_project 3 137824673 137825221 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060227.1 MGP_WSBEiJ_G0026567.1 mouse_genomes_project 3 81140514 81181724 - MGP_WSBEiJ_P0060227 Gucy1b3 protein_coding protein_coding MGP_WSBEiJ_T0060228.1 MGP_WSBEiJ_G0026567.1 mouse_genomes_project 3 81141570 81142582 - Gucy1b3 protein_coding retained_intron MGP_WSBEiJ_T0060229.1 MGP_WSBEiJ_G0026567.1 mouse_genomes_project 3 81158272 81181823 - Gucy1b3 protein_coding processed_transcript MGP_WSBEiJ_T0004331.1 MGP_WSBEiJ_G0003777.1 mouse_genomes_project 3 156830454 156834218 + Gm43400 antisense antisense MGP_WSBEiJ_T0013749.1 MGP_WSBEiJ_G0011879.1 mouse_genomes_project 3 74951865 74952656 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013605.1 MGP_WSBEiJ_G0011735.1 mouse_genomes_project 3 30684334 30684566 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099462.1 MGP_WSBEiJ_G0038125.1 mouse_genomes_project 3 103908977 103909079 + Gm25009 snoRNA snoRNA MGP_WSBEiJ_T0062721.1 MGP_WSBEiJ_G0027126.1 mouse_genomes_project 3 134466324 134482434 + MGP_WSBEiJ_P0062721 Gimd1 protein_coding protein_coding MGP_WSBEiJ_T0062722.1 MGP_WSBEiJ_G0027126.1 mouse_genomes_project 3 134470858 134481715 + MGP_WSBEiJ_P0062722 Gimd1 protein_coding protein_coding MGP_WSBEiJ_T0001364.1 MGP_WSBEiJ_G0001293.1 mouse_genomes_project 3 161213100 161214456 + TEC TEC MGP_WSBEiJ_T0062390.1 MGP_WSBEiJ_G0027068.1 mouse_genomes_project 3 122849079 122850463 - Slc44a3 protein_coding processed_transcript MGP_WSBEiJ_T0062391.1 MGP_WSBEiJ_G0027068.1 mouse_genomes_project 3 122849079 122927172 - MGP_WSBEiJ_P0062391 Slc44a3 protein_coding protein_coding MGP_WSBEiJ_T0062392.1 MGP_WSBEiJ_G0027068.1 mouse_genomes_project 3 122914089 122921964 - Slc44a3 protein_coding processed_transcript MGP_WSBEiJ_T0061999.1 MGP_WSBEiJ_G0026983.1 mouse_genomes_project 3 108000190 108005103 + MGP_WSBEiJ_P0061999 Lamtor5 protein_coding protein_coding MGP_WSBEiJ_T0098205.1 MGP_WSBEiJ_G0036868.1 mouse_genomes_project 3 105291895 105291985 + Gm24223 snRNA snRNA MGP_WSBEiJ_T0007501.1 MGP_WSBEiJ_G0006138.1 mouse_genomes_project 3 92592065 92592452 - Gm38201 lincRNA lincRNA MGP_WSBEiJ_T0001221.1 MGP_WSBEiJ_G0001151.1 mouse_genomes_project 3 84102578 84106478 + TEC TEC MGP_WSBEiJ_T0007553.1 MGP_WSBEiJ_G0006183.1 mouse_genomes_project 3 117643132 117647599 + Gm26530 lincRNA lincRNA MGP_WSBEiJ_T0001333.1 MGP_WSBEiJ_G0001262.1 mouse_genomes_project 3 141073295 141075070 - TEC TEC MGP_WSBEiJ_T0061125.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94290118 94297013 + MGP_WSBEiJ_P0061125 Celf3 protein_coding protein_coding MGP_WSBEiJ_T0061126.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94290501 94303847 + MGP_WSBEiJ_P0061126 Celf3 protein_coding protein_coding MGP_WSBEiJ_T0061127.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94290748 94303848 + MGP_WSBEiJ_P0061127 Celf3 protein_coding protein_coding MGP_WSBEiJ_T0061128.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94290777 94301241 + MGP_WSBEiJ_P0061128 Celf3 protein_coding protein_coding MGP_WSBEiJ_T0061129.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94290787 94299262 + Celf3 protein_coding retained_intron MGP_WSBEiJ_T0061130.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94294245 94298905 + Celf3 protein_coding processed_transcript MGP_WSBEiJ_T0061131.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94294412 94303847 + Celf3 protein_coding processed_transcript MGP_WSBEiJ_T0061132.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94296021 94303847 + Celf3 protein_coding retained_intron MGP_WSBEiJ_T0061133.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94296058 94298633 + MGP_WSBEiJ_P0061133 Celf3 protein_coding protein_coding MGP_WSBEiJ_T0061134.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94296065 94298978 + MGP_WSBEiJ_P0061134 Celf3 protein_coding protein_coding MGP_WSBEiJ_T0061135.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94296971 94303836 + Celf3 protein_coding retained_intron MGP_WSBEiJ_T0061136.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94298339 94300305 + Celf3 protein_coding retained_intron MGP_WSBEiJ_T0061137.1 MGP_WSBEiJ_G0026790.1 mouse_genomes_project 3 94298895 94301250 + Celf3 protein_coding retained_intron MGP_WSBEiJ_T0001193.1 MGP_WSBEiJ_G0001123.1 mouse_genomes_project 3 56758437 56759629 + TEC TEC MGP_WSBEiJ_T0013715.1 MGP_WSBEiJ_G0011845.1 mouse_genomes_project 3 64183996 64184803 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061996.1 MGP_WSBEiJ_G0026982.1 mouse_genomes_project 3 107953285 107959133 - MGP_WSBEiJ_P0061996 Prok1 protein_coding protein_coding MGP_WSBEiJ_T0061997.1 MGP_WSBEiJ_G0026982.1 mouse_genomes_project 3 107953294 107957742 - Prok1 protein_coding retained_intron MGP_WSBEiJ_T0061998.1 MGP_WSBEiJ_G0026982.1 mouse_genomes_project 3 107955612 107960188 - MGP_WSBEiJ_P0061998 Prok1 protein_coding protein_coding MGP_WSBEiJ_T0007572.1 MGP_WSBEiJ_G0006195.1 mouse_genomes_project 3 125753242 125828259 + Gm43731 lincRNA lincRNA MGP_WSBEiJ_T0060458.1 MGP_WSBEiJ_G0026622.1 mouse_genomes_project 3 87396595 87410285 + MGP_WSBEiJ_P0060458 Gpatch4 protein_coding protein_coding MGP_WSBEiJ_T0060459.1 MGP_WSBEiJ_G0026622.1 mouse_genomes_project 3 87396595 87410282 + MGP_WSBEiJ_P0060459 Gpatch4 protein_coding protein_coding MGP_WSBEiJ_T0060460.1 MGP_WSBEiJ_G0026622.1 mouse_genomes_project 3 87396596 87408955 + Gpatch4 protein_coding retained_intron MGP_WSBEiJ_T0060461.1 MGP_WSBEiJ_G0026622.1 mouse_genomes_project 3 87396611 87409495 + MGP_WSBEiJ_P0060461 Gpatch4 protein_coding protein_coding MGP_WSBEiJ_T0060462.1 MGP_WSBEiJ_G0026622.1 mouse_genomes_project 3 87396615 87410268 + MGP_WSBEiJ_P0060462 Gpatch4 protein_coding protein_coding MGP_WSBEiJ_T0099442.1 MGP_WSBEiJ_G0038105.1 mouse_genomes_project 3 76091238 76091315 - Gm23644 snoRNA snoRNA MGP_WSBEiJ_T0099460.1 MGP_WSBEiJ_G0038123.1 mouse_genomes_project 3 99441217 99441334 - Gm24216 snoRNA snoRNA MGP_WSBEiJ_T0001208.1 MGP_WSBEiJ_G0001138.1 mouse_genomes_project 3 71818533 71820398 - TEC TEC MGP_WSBEiJ_T0062783.1 MGP_WSBEiJ_G0027138.1 mouse_genomes_project 3 137159285 137184671 + MGP_WSBEiJ_P0062783 Bdh2 protein_coding protein_coding MGP_WSBEiJ_T0062784.1 MGP_WSBEiJ_G0027138.1 mouse_genomes_project 3 137159325 137184671 + MGP_WSBEiJ_P0062784 Bdh2 protein_coding protein_coding MGP_WSBEiJ_T0062785.1 MGP_WSBEiJ_G0027138.1 mouse_genomes_project 3 137159347 137162479 + Bdh2 protein_coding retained_intron MGP_WSBEiJ_T0062786.1 MGP_WSBEiJ_G0027138.1 mouse_genomes_project 3 137167411 137184668 + Bdh2 protein_coding processed_transcript MGP_WSBEiJ_T0100783.1 MGP_WSBEiJ_G0039241.1 mouse_genomes_project 3 94080958 94081150 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010360.1 MGP_WSBEiJ_G0008517.1 mouse_genomes_project 3 89847617 89847681 + Mir7012 miRNA miRNA MGP_WSBEiJ_T0017363.1 MGP_WSBEiJ_G0014926.1 mouse_genomes_project 3 49577596 49584674 + 5031434O11Rik processed_transcript antisense MGP_WSBEiJ_T0017364.1 MGP_WSBEiJ_G0014926.1 mouse_genomes_project 3 49580032 49584662 + 5031434O11Rik processed_transcript antisense MGP_WSBEiJ_T0017365.1 MGP_WSBEiJ_G0014926.1 mouse_genomes_project 3 49581200 49584668 + 5031434O11Rik processed_transcript retained_intron MGP_WSBEiJ_T0059991.1 MGP_WSBEiJ_G0026513.1 mouse_genomes_project 3 63939358 63952421 - MGP_WSBEiJ_P0059991 Ssr3 protein_coding protein_coding MGP_WSBEiJ_T0059992.1 MGP_WSBEiJ_G0026513.1 mouse_genomes_project 3 63941385 63943089 - Ssr3 protein_coding retained_intron MGP_WSBEiJ_T0059993.1 MGP_WSBEiJ_G0026513.1 mouse_genomes_project 3 63941735 63952351 - MGP_WSBEiJ_P0059993 Ssr3 protein_coding protein_coding MGP_WSBEiJ_T0097039.1 MGP_WSBEiJ_G0035720.1 mouse_genomes_project 3 6682312 6682421 - Gm24786 rRNA rRNA MGP_WSBEiJ_T0061070.1 MGP_WSBEiJ_G0026766.1 mouse_genomes_project 3 92687302 92688421 + MGP_WSBEiJ_P0061070 Lce3b protein_coding protein_coding MGP_WSBEiJ_T0061834.1 MGP_WSBEiJ_G0026941.1 mouse_genomes_project 3 104459693 104516478 + MGP_WSBEiJ_P0061834 Rsbn1 protein_coding protein_coding MGP_WSBEiJ_T0061835.1 MGP_WSBEiJ_G0026941.1 mouse_genomes_project 3 104459724 104516501 + MGP_WSBEiJ_P0061835 Rsbn1 protein_coding protein_coding MGP_WSBEiJ_T0061836.1 MGP_WSBEiJ_G0026941.1 mouse_genomes_project 3 104460140 104513736 + MGP_WSBEiJ_P0061836 Rsbn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061837.1 MGP_WSBEiJ_G0026941.1 mouse_genomes_project 3 104474955 104510001 + MGP_WSBEiJ_P0061837 Rsbn1 protein_coding protein_coding MGP_WSBEiJ_T0059984.1 MGP_WSBEiJ_G0026511.1 mouse_genomes_project 3 62582263 62609285 - MGP_WSBEiJ_P0059984 protein_coding protein_coding MGP_WSBEiJ_T0060051.1 MGP_WSBEiJ_G0026527.1 mouse_genomes_project 3 66479436 67254093 + MGP_WSBEiJ_P0060051 Gm21949 protein_coding protein_coding MGP_WSBEiJ_T0061027.1 MGP_WSBEiJ_G0026729.1 mouse_genomes_project 3 91852397 91860254 - MGP_WSBEiJ_P0061027 Lelp1 protein_coding protein_coding MGP_WSBEiJ_T0013726.1 MGP_WSBEiJ_G0011856.1 mouse_genomes_project 3 66204246 66205194 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017372.1 MGP_WSBEiJ_G0014930.1 mouse_genomes_project 3 87561280 87564150 + AW047730 processed_transcript processed_transcript MGP_WSBEiJ_T0017373.1 MGP_WSBEiJ_G0014930.1 mouse_genomes_project 3 87561292 87564150 + AW047730 processed_transcript processed_transcript MGP_WSBEiJ_T0060249.1 MGP_WSBEiJ_G0026572.1 mouse_genomes_project 3 82021676 82034009 - MGP_WSBEiJ_P0060249 Lrat protein_coding protein_coding MGP_WSBEiJ_T0013861.1 MGP_WSBEiJ_G0011991.1 mouse_genomes_project 3 111140872 111141209 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013699.1 MGP_WSBEiJ_G0011829.1 mouse_genomes_project 3 58066589 58066993 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013801.1 MGP_WSBEiJ_G0011931.1 mouse_genomes_project 3 93218389 93218941 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013761.1 MGP_WSBEiJ_G0011891.1 mouse_genomes_project 3 77904938 77905498 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007506.1 MGP_WSBEiJ_G0006143.1 mouse_genomes_project 3 95828261 95833796 + Gm26594 lincRNA lincRNA MGP_WSBEiJ_T0001145.1 MGP_WSBEiJ_G0001077.1 mouse_genomes_project 3 48583192 48584524 - TEC TEC MGP_WSBEiJ_T0063290.1 MGP_WSBEiJ_G0027229.1 mouse_genomes_project 3 155673652 155847089 - MGP_WSBEiJ_P0063290 St6galnac5 protein_coding protein_coding MGP_WSBEiJ_T0063291.1 MGP_WSBEiJ_G0027229.1 mouse_genomes_project 3 155840239 155846895 - St6galnac5 protein_coding processed_transcript MGP_WSBEiJ_T0060571.1 MGP_WSBEiJ_G0026645.1 mouse_genomes_project 3 87945194 87962102 + MGP_WSBEiJ_P0060571 Ubqln4 protein_coding protein_coding MGP_WSBEiJ_T0060572.1 MGP_WSBEiJ_G0026645.1 mouse_genomes_project 3 87945203 87955922 + Ubqln4 protein_coding retained_intron MGP_WSBEiJ_T0060573.1 MGP_WSBEiJ_G0026645.1 mouse_genomes_project 3 87945235 87948273 + MGP_WSBEiJ_P0060573 Ubqln4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060574.1 MGP_WSBEiJ_G0026645.1 mouse_genomes_project 3 87948137 87956877 + Ubqln4 protein_coding processed_transcript MGP_WSBEiJ_T0060575.1 MGP_WSBEiJ_G0026645.1 mouse_genomes_project 3 87956269 87957637 + Ubqln4 protein_coding retained_intron MGP_WSBEiJ_T0062723.1 MGP_WSBEiJ_G0027127.1 mouse_genomes_project 3 134499369 134522770 - MGP_WSBEiJ_P0062723 Aimp1 protein_coding protein_coding MGP_WSBEiJ_T0062724.1 MGP_WSBEiJ_G0027127.1 mouse_genomes_project 3 134510686 134513807 - Aimp1 protein_coding retained_intron MGP_WSBEiJ_T0062725.1 MGP_WSBEiJ_G0027127.1 mouse_genomes_project 3 134510949 134516120 - Aimp1 protein_coding retained_intron MGP_WSBEiJ_T0062726.1 MGP_WSBEiJ_G0027127.1 mouse_genomes_project 3 134513036 134523256 - MGP_WSBEiJ_P0062726 Aimp1 protein_coding protein_coding MGP_WSBEiJ_T0062727.1 MGP_WSBEiJ_G0027127.1 mouse_genomes_project 3 134513126 134523008 - MGP_WSBEiJ_P0062727 Aimp1 protein_coding protein_coding MGP_WSBEiJ_T0062728.1 MGP_WSBEiJ_G0027127.1 mouse_genomes_project 3 134513142 134522723 - MGP_WSBEiJ_P0062728 Aimp1 protein_coding protein_coding MGP_WSBEiJ_T0062729.1 MGP_WSBEiJ_G0027127.1 mouse_genomes_project 3 134513837 134523010 - MGP_WSBEiJ_P0062729 Aimp1 protein_coding protein_coding MGP_WSBEiJ_T0062730.1 MGP_WSBEiJ_G0027127.1 mouse_genomes_project 3 134518759 134522722 - Aimp1 protein_coding retained_intron MGP_WSBEiJ_T0059782.1 MGP_WSBEiJ_G0026462.1 mouse_genomes_project 3 53288630 53313838 + MGP_WSBEiJ_P0059782 Spg20 protein_coding protein_coding MGP_WSBEiJ_T0059783.1 MGP_WSBEiJ_G0026462.1 mouse_genomes_project 3 53288635 53305842 + Spg20 protein_coding retained_intron MGP_WSBEiJ_T0059784.1 MGP_WSBEiJ_G0026462.1 mouse_genomes_project 3 53288651 53313827 + MGP_WSBEiJ_P0059784 Spg20 protein_coding protein_coding MGP_WSBEiJ_T0059785.1 MGP_WSBEiJ_G0026462.1 mouse_genomes_project 3 53288660 53290775 + Spg20 protein_coding retained_intron MGP_WSBEiJ_T0059786.1 MGP_WSBEiJ_G0026462.1 mouse_genomes_project 3 53288688 53313833 + MGP_WSBEiJ_P0059786 Spg20 protein_coding protein_coding MGP_WSBEiJ_T0059787.1 MGP_WSBEiJ_G0026462.1 mouse_genomes_project 3 53288909 53306210 + MGP_WSBEiJ_P0059787 Spg20 protein_coding protein_coding MGP_WSBEiJ_T0059788.1 MGP_WSBEiJ_G0026462.1 mouse_genomes_project 3 53289118 53293781 + MGP_WSBEiJ_P0059788 Spg20 protein_coding protein_coding MGP_WSBEiJ_T0059789.1 MGP_WSBEiJ_G0026462.1 mouse_genomes_project 3 53292697 53293853 + MGP_WSBEiJ_P0059789 Spg20 protein_coding protein_coding MGP_WSBEiJ_T0017426.1 MGP_WSBEiJ_G0014949.1 mouse_genomes_project 3 145176100 145194059 + Gm43646 processed_transcript processed_transcript MGP_WSBEiJ_T0062675.1 MGP_WSBEiJ_G0027116.1 mouse_genomes_project 3 131922649 131974197 + Col25a1 protein_coding processed_transcript MGP_WSBEiJ_T0062676.1 MGP_WSBEiJ_G0027116.1 mouse_genomes_project 3 131972214 132355945 + Col25a1 protein_coding retained_intron MGP_WSBEiJ_T0062677.1 MGP_WSBEiJ_G0027116.1 mouse_genomes_project 3 131972214 132409946 + MGP_WSBEiJ_P0062677 Col25a1 protein_coding protein_coding MGP_WSBEiJ_T0062678.1 MGP_WSBEiJ_G0027116.1 mouse_genomes_project 3 131972214 132405201 + MGP_WSBEiJ_P0062678 Col25a1 protein_coding protein_coding MGP_WSBEiJ_T0062679.1 MGP_WSBEiJ_G0027116.1 mouse_genomes_project 3 131972214 132406390 + MGP_WSBEiJ_P0062679 Col25a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062680.1 MGP_WSBEiJ_G0027116.1 mouse_genomes_project 3 132282278 132285005 + Col25a1 protein_coding retained_intron MGP_WSBEiJ_T0061480.1 MGP_WSBEiJ_G0026857.1 mouse_genomes_project 3 96628488 96632175 + MGP_WSBEiJ_P0061480 Gm16253 protein_coding protein_coding MGP_WSBEiJ_T0061732.1 MGP_WSBEiJ_G0026924.1 mouse_genomes_project 3 103482039 103495741 + MGP_WSBEiJ_P0061732 Sike1 protein_coding protein_coding MGP_WSBEiJ_T0061733.1 MGP_WSBEiJ_G0026924.1 mouse_genomes_project 3 103482061 103485599 + Sike1 protein_coding retained_intron MGP_WSBEiJ_T0061734.1 MGP_WSBEiJ_G0026924.1 mouse_genomes_project 3 103482126 103489481 + MGP_WSBEiJ_P0061734 Sike1 protein_coding protein_coding MGP_WSBEiJ_T0061735.1 MGP_WSBEiJ_G0026924.1 mouse_genomes_project 3 103482403 103483699 + Sike1 protein_coding retained_intron MGP_WSBEiJ_T0061736.1 MGP_WSBEiJ_G0026924.1 mouse_genomes_project 3 103482530 103489123 + MGP_WSBEiJ_P0061736 Sike1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061737.1 MGP_WSBEiJ_G0026924.1 mouse_genomes_project 3 103483076 103485586 + Sike1 protein_coding retained_intron MGP_WSBEiJ_T0098198.1 MGP_WSBEiJ_G0036861.1 mouse_genomes_project 3 96441292 96441457 + Gm24136 snRNA snRNA MGP_WSBEiJ_T0062711.1 MGP_WSBEiJ_G0027123.1 mouse_genomes_project 3 133181566 133208289 - MGP_WSBEiJ_P0062711 Sgms2 protein_coding protein_coding MGP_WSBEiJ_T0062712.1 MGP_WSBEiJ_G0027123.1 mouse_genomes_project 3 133205463 133208296 - MGP_WSBEiJ_P0062712 Sgms2 protein_coding protein_coding MGP_WSBEiJ_T0062713.1 MGP_WSBEiJ_G0027123.1 mouse_genomes_project 3 133205522 133275361 - MGP_WSBEiJ_P0062713 Sgms2 protein_coding protein_coding MGP_WSBEiJ_T0062714.1 MGP_WSBEiJ_G0027123.1 mouse_genomes_project 3 133205587 133276293 - Sgms2 protein_coding processed_transcript MGP_WSBEiJ_T0098168.1 MGP_WSBEiJ_G0036831.1 mouse_genomes_project 3 64082759 64082852 + Gm22279 snRNA snRNA MGP_WSBEiJ_T0004288.1 MGP_WSBEiJ_G0003747.1 mouse_genomes_project 3 128778911 128785765 + Gm16958 antisense antisense MGP_WSBEiJ_T0004289.1 MGP_WSBEiJ_G0003747.1 mouse_genomes_project 3 128778945 128784794 + Gm16958 antisense antisense MGP_WSBEiJ_T0058995.1 MGP_WSBEiJ_G0026314.1 mouse_genomes_project 3 11453780 11480013 + MGP_WSBEiJ_P0058995 Slc7a12 protein_coding protein_coding MGP_WSBEiJ_T0058996.1 MGP_WSBEiJ_G0026314.1 mouse_genomes_project 3 11453783 11479863 + MGP_WSBEiJ_P0058996 Slc7a12 protein_coding protein_coding MGP_WSBEiJ_T0058997.1 MGP_WSBEiJ_G0026314.1 mouse_genomes_project 3 11453856 11479863 + MGP_WSBEiJ_P0058997 Slc7a12 protein_coding protein_coding MGP_WSBEiJ_T0013655.1 MGP_WSBEiJ_G0011785.1 mouse_genomes_project 3 45999090 45999752 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061921.1 MGP_WSBEiJ_G0026961.1 mouse_genomes_project 3 106565273 106573616 - MGP_WSBEiJ_P0061921 I830077J02Rik protein_coding protein_coding MGP_WSBEiJ_T0061922.1 MGP_WSBEiJ_G0026961.1 mouse_genomes_project 3 106567338 106568938 - MGP_WSBEiJ_P0061922 I830077J02Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061923.1 MGP_WSBEiJ_G0026961.1 mouse_genomes_project 3 106568624 106573568 - I830077J02Rik protein_coding retained_intron MGP_WSBEiJ_T0011343.1 MGP_WSBEiJ_G0009500.1 mouse_genomes_project 3 81919076 81919318 - Gm22038 misc_RNA misc_RNA MGP_WSBEiJ_T0007452.1 MGP_WSBEiJ_G0006106.1 mouse_genomes_project 3 71845251 71988726 + lincRNA lincRNA MGP_WSBEiJ_T0007453.1 MGP_WSBEiJ_G0006106.1 mouse_genomes_project 3 71845286 72409931 + lincRNA lincRNA MGP_WSBEiJ_T0010379.1 MGP_WSBEiJ_G0008536.1 mouse_genomes_project 3 129187267 129187335 + Mir302c miRNA miRNA MGP_WSBEiJ_T0060336.1 MGP_WSBEiJ_G0026595.1 mouse_genomes_project 3 85408447 85414981 - MGP_WSBEiJ_P0060336 Rps3a1 protein_coding protein_coding MGP_WSBEiJ_T0060337.1 MGP_WSBEiJ_G0026595.1 mouse_genomes_project 3 85410366 85414891 - MGP_WSBEiJ_P0060337 Rps3a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0010367.1 MGP_WSBEiJ_G0008524.1 mouse_genomes_project 3 97834745 97834799 - Mir7225 miRNA miRNA MGP_WSBEiJ_T0004155.1 MGP_WSBEiJ_G0003658.1 mouse_genomes_project 3 43189697 43214554 - 1700027H10Rik antisense antisense MGP_WSBEiJ_T0013631.1 MGP_WSBEiJ_G0011761.1 mouse_genomes_project 3 37524737 37525017 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001156.1 MGP_WSBEiJ_G0001088.1 mouse_genomes_project 3 49502953 49506156 + TEC TEC MGP_WSBEiJ_T0099415.1 MGP_WSBEiJ_G0038078.1 mouse_genomes_project 3 5484856 5484975 - Gm23670 snoRNA snoRNA MGP_WSBEiJ_T0013852.1 MGP_WSBEiJ_G0011982.1 mouse_genomes_project 3 108670251 108670399 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010348.1 MGP_WSBEiJ_G0008505.1 mouse_genomes_project 3 79764625 79764736 - Gm25749 miRNA miRNA MGP_WSBEiJ_T0004297.1 MGP_WSBEiJ_G0003754.1 mouse_genomes_project 3 132948232 132951303 - Gm43352 antisense antisense MGP_WSBEiJ_T0004275.1 MGP_WSBEiJ_G0003737.1 mouse_genomes_project 3 117785105 117785644 + Gm42457 antisense antisense MGP_WSBEiJ_T0007511.1 MGP_WSBEiJ_G0006147.1 mouse_genomes_project 3 96383972 96397371 - lincRNA lincRNA MGP_WSBEiJ_T0007548.1 MGP_WSBEiJ_G0006179.1 mouse_genomes_project 3 112848421 113057444 + lincRNA lincRNA MGP_WSBEiJ_T0060965.1 MGP_WSBEiJ_G0026707.1 mouse_genomes_project 3 90046922 90066263 - MGP_WSBEiJ_P0060965 Npr1 protein_coding protein_coding MGP_WSBEiJ_T0060966.1 MGP_WSBEiJ_G0026707.1 mouse_genomes_project 3 90047041 90048104 - Npr1 protein_coding retained_intron MGP_WSBEiJ_T0060967.1 MGP_WSBEiJ_G0026707.1 mouse_genomes_project 3 90052604 90057826 - Npr1 protein_coding processed_transcript MGP_WSBEiJ_T0060968.1 MGP_WSBEiJ_G0026707.1 mouse_genomes_project 3 90057748 90059288 - Npr1 protein_coding retained_intron MGP_WSBEiJ_T0060969.1 MGP_WSBEiJ_G0026707.1 mouse_genomes_project 3 90057767 90061770 - MGP_WSBEiJ_P0060969 Npr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059859.1 MGP_WSBEiJ_G0026477.1 mouse_genomes_project 3 56751316 56757400 - MGP_WSBEiJ_P0059859 Serp1 protein_coding protein_coding MGP_WSBEiJ_T0059951.1 MGP_WSBEiJ_G0026502.1 mouse_genomes_project 3 60929089 61002030 - MGP_WSBEiJ_P0059951 Gpr149 protein_coding protein_coding MGP_WSBEiJ_T0059952.1 MGP_WSBEiJ_G0026502.1 mouse_genomes_project 3 60988398 60999679 - Gpr149 protein_coding retained_intron MGP_WSBEiJ_T0063029.1 MGP_WSBEiJ_G0027185.1 mouse_genomes_project 3 146946010 146973665 + protein_coding processed_transcript MGP_WSBEiJ_T0063030.1 MGP_WSBEiJ_G0027185.1 mouse_genomes_project 3 146946132 146974088 + MGP_WSBEiJ_P0063030 protein_coding protein_coding MGP_WSBEiJ_T0063031.1 MGP_WSBEiJ_G0027185.1 mouse_genomes_project 3 146946399 146974069 + MGP_WSBEiJ_P0063031 protein_coding protein_coding MGP_WSBEiJ_T0063032.1 MGP_WSBEiJ_G0027185.1 mouse_genomes_project 3 146946420 146949120 + protein_coding retained_intron MGP_WSBEiJ_T0063033.1 MGP_WSBEiJ_G0027185.1 mouse_genomes_project 3 146953353 146971838 + MGP_WSBEiJ_P0063033 protein_coding protein_coding MGP_WSBEiJ_T0063034.1 MGP_WSBEiJ_G0027185.1 mouse_genomes_project 3 146966853 146968019 + protein_coding retained_intron MGP_WSBEiJ_T0010345.1 MGP_WSBEiJ_G0008502.1 mouse_genomes_project 3 64231531 64231670 + Mir8120 miRNA miRNA MGP_WSBEiJ_T0013771.1 MGP_WSBEiJ_G0011901.1 mouse_genomes_project 3 84388892 84389553 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099483.1 MGP_WSBEiJ_G0038146.1 mouse_genomes_project 3 150976584 150976716 - Gm23131 snoRNA snoRNA MGP_WSBEiJ_T0061206.1 MGP_WSBEiJ_G0026800.1 mouse_genomes_project 3 94920613 94925831 - protein_coding retained_intron MGP_WSBEiJ_T0061207.1 MGP_WSBEiJ_G0026800.1 mouse_genomes_project 3 94920855 94929248 - protein_coding retained_intron MGP_WSBEiJ_T0061208.1 MGP_WSBEiJ_G0026800.1 mouse_genomes_project 3 94920855 94929429 - protein_coding retained_intron MGP_WSBEiJ_T0061209.1 MGP_WSBEiJ_G0026800.1 mouse_genomes_project 3 94920860 94929462 - MGP_WSBEiJ_P0061209 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061210.1 MGP_WSBEiJ_G0026800.1 mouse_genomes_project 3 94921498 94929399 - MGP_WSBEiJ_P0061210 protein_coding unknown_likely_coding MGP_WSBEiJ_T0061211.1 MGP_WSBEiJ_G0026800.1 mouse_genomes_project 3 94925863 94929473 - MGP_WSBEiJ_P0061211 protein_coding protein_coding MGP_WSBEiJ_T0061212.1 MGP_WSBEiJ_G0026800.1 mouse_genomes_project 3 94925992 94929249 - MGP_WSBEiJ_P0061212 protein_coding protein_coding MGP_WSBEiJ_T0061213.1 MGP_WSBEiJ_G0026800.1 mouse_genomes_project 3 94926197 94929243 - MGP_WSBEiJ_P0061213 protein_coding protein_coding MGP_WSBEiJ_T0004148.1 MGP_WSBEiJ_G0003652.1 mouse_genomes_project 3 34709934 34719134 - Gm12531 antisense antisense MGP_WSBEiJ_T0004149.1 MGP_WSBEiJ_G0003652.1 mouse_genomes_project 3 34709936 34719129 - Gm12531 antisense antisense MGP_WSBEiJ_T0061349.1 MGP_WSBEiJ_G0026825.1 mouse_genomes_project 3 95581887 95582885 + Ensa protein_coding TEC MGP_WSBEiJ_T0061350.1 MGP_WSBEiJ_G0026825.1 mouse_genomes_project 3 95581905 95589010 + MGP_WSBEiJ_P0061350 Ensa protein_coding protein_coding MGP_WSBEiJ_T0061351.1 MGP_WSBEiJ_G0026825.1 mouse_genomes_project 3 95581914 95589010 + MGP_WSBEiJ_P0061351 Ensa protein_coding protein_coding MGP_WSBEiJ_T0061352.1 MGP_WSBEiJ_G0026825.1 mouse_genomes_project 3 95581920 95584429 + Ensa protein_coding retained_intron MGP_WSBEiJ_T0010337.1 MGP_WSBEiJ_G0008494.1 mouse_genomes_project 3 32168679 32168758 + Mir1897 miRNA miRNA MGP_WSBEiJ_T0061353.1 MGP_WSBEiJ_G0026826.1 mouse_genomes_project 3 95616692 95621081 + MGP_WSBEiJ_P0061353 Mcl1 protein_coding protein_coding MGP_WSBEiJ_T0061354.1 MGP_WSBEiJ_G0026826.1 mouse_genomes_project 3 95616761 95618728 + MGP_WSBEiJ_P0061354 Mcl1 protein_coding protein_coding MGP_WSBEiJ_T0061240.1 MGP_WSBEiJ_G0026805.1 mouse_genomes_project 3 95050906 95051847 - Scnm1 protein_coding retained_intron MGP_WSBEiJ_T0061241.1 MGP_WSBEiJ_G0026805.1 mouse_genomes_project 3 95050907 95054753 - Scnm1 protein_coding retained_intron MGP_WSBEiJ_T0061242.1 MGP_WSBEiJ_G0026805.1 mouse_genomes_project 3 95050909 95051476 - Scnm1 protein_coding retained_intron MGP_WSBEiJ_T0061243.1 MGP_WSBEiJ_G0026805.1 mouse_genomes_project 3 95050911 95051649 - Scnm1 protein_coding retained_intron MGP_WSBEiJ_T0061244.1 MGP_WSBEiJ_G0026805.1 mouse_genomes_project 3 95050911 95054875 - MGP_WSBEiJ_P0061244 Scnm1 protein_coding protein_coding MGP_WSBEiJ_T0061245.1 MGP_WSBEiJ_G0026805.1 mouse_genomes_project 3 95050913 95052245 - Scnm1 protein_coding processed_transcript MGP_WSBEiJ_T0061246.1 MGP_WSBEiJ_G0026805.1 mouse_genomes_project 3 95050916 95054991 - MGP_WSBEiJ_P0061246 Scnm1 protein_coding protein_coding MGP_WSBEiJ_T0061247.1 MGP_WSBEiJ_G0026805.1 mouse_genomes_project 3 95051480 95054919 - Scnm1 protein_coding retained_intron MGP_WSBEiJ_T0013753.1 MGP_WSBEiJ_G0011883.1 mouse_genomes_project 3 76899144 76899516 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097382.1 MGP_WSBEiJ_G0036056.1 mouse_genomes_project 3 130938325 130939817 + Gm27195 sense_intronic sense_intronic MGP_WSBEiJ_T0059238.1 MGP_WSBEiJ_G0026368.1 mouse_genomes_project 3 28147538 28168284 + MGP_WSBEiJ_P0059238 Samd7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059239.1 MGP_WSBEiJ_G0026368.1 mouse_genomes_project 3 28147585 28168292 + MGP_WSBEiJ_P0059239 Samd7 protein_coding protein_coding MGP_WSBEiJ_T0059240.1 MGP_WSBEiJ_G0026368.1 mouse_genomes_project 3 28152288 28166626 + MGP_WSBEiJ_P0059240 Samd7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059241.1 MGP_WSBEiJ_G0026368.1 mouse_genomes_project 3 28157440 28158679 + Samd7 protein_coding retained_intron MGP_WSBEiJ_T0061182.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862676 94869919 + MGP_WSBEiJ_P0061182 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061183.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862709 94866952 + MGP_WSBEiJ_P0061183 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061184.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862709 94871984 + MGP_WSBEiJ_P0061184 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061185.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862710 94866736 + MGP_WSBEiJ_P0061185 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061186.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862736 94871772 + MGP_WSBEiJ_P0061186 Rfx5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061187.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862761 94866126 + Rfx5 protein_coding processed_transcript MGP_WSBEiJ_T0061188.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862761 94867571 + MGP_WSBEiJ_P0061188 Rfx5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061189.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862771 94871772 + MGP_WSBEiJ_P0061189 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061190.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862796 94866814 + MGP_WSBEiJ_P0061190 Rfx5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061191.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862802 94871769 + Rfx5 protein_coding retained_intron MGP_WSBEiJ_T0061192.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862827 94871772 + MGP_WSBEiJ_P0061192 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061193.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94862985 94867218 + MGP_WSBEiJ_P0061193 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061194.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94863079 94866750 + MGP_WSBEiJ_P0061194 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061195.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94863128 94866781 + MGP_WSBEiJ_P0061195 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061196.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94865185 94870029 + MGP_WSBEiJ_P0061196 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061197.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94865437 94871984 + MGP_WSBEiJ_P0061197 Rfx5 protein_coding protein_coding MGP_WSBEiJ_T0061198.1 MGP_WSBEiJ_G0026798.1 mouse_genomes_project 3 94865893 94867225 + Rfx5 protein_coding retained_intron MGP_WSBEiJ_T0007642.1 MGP_WSBEiJ_G0006257.1 mouse_genomes_project 3 150210595 150227385 - Gm36888 lincRNA lincRNA MGP_WSBEiJ_T0062687.1 MGP_WSBEiJ_G0027118.1 mouse_genomes_project 3 132504666 132518211 - MGP_WSBEiJ_P0062687 Ostc protein_coding protein_coding MGP_WSBEiJ_T0062688.1 MGP_WSBEiJ_G0027118.1 mouse_genomes_project 3 132504673 132505374 - Ostc protein_coding retained_intron MGP_WSBEiJ_T0062689.1 MGP_WSBEiJ_G0027118.1 mouse_genomes_project 3 132516483 132518183 - Ostc protein_coding retained_intron MGP_WSBEiJ_T0001286.1 MGP_WSBEiJ_G0001216.1 mouse_genomes_project 3 128218409 128221318 + TEC TEC MGP_WSBEiJ_T0013606.1 MGP_WSBEiJ_G0011736.1 mouse_genomes_project 3 31165734 31166092 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013719.1 MGP_WSBEiJ_G0011849.1 mouse_genomes_project 3 64622132 64622994 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013644.1 MGP_WSBEiJ_G0011774.1 mouse_genomes_project 3 42432405 42432793 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017377.1 MGP_WSBEiJ_G0014932.1 mouse_genomes_project 3 94159724 94164063 - Gm36070 processed_transcript lincRNA MGP_WSBEiJ_T0017378.1 MGP_WSBEiJ_G0014932.1 mouse_genomes_project 3 94160543 94162433 - Gm36070 processed_transcript retained_intron MGP_WSBEiJ_T0061652.1 MGP_WSBEiJ_G0026904.1 mouse_genomes_project 3 100816814 100857793 - Fam46c protein_coding processed_transcript MGP_WSBEiJ_T0061653.1 MGP_WSBEiJ_G0026904.1 mouse_genomes_project 3 100816817 100857789 - Fam46c protein_coding processed_transcript MGP_WSBEiJ_T0061654.1 MGP_WSBEiJ_G0026904.1 mouse_genomes_project 3 100836738 100857919 - MGP_WSBEiJ_P0061654 Fam46c protein_coding protein_coding MGP_WSBEiJ_T0060768.1 MGP_WSBEiJ_G0026672.1 mouse_genomes_project 3 88757339 88765158 - MGP_WSBEiJ_P0060768 Efna1 protein_coding protein_coding MGP_WSBEiJ_T0060769.1 MGP_WSBEiJ_G0026672.1 mouse_genomes_project 3 88757348 88765257 - MGP_WSBEiJ_P0060769 Efna1 protein_coding protein_coding MGP_WSBEiJ_T0001181.1 MGP_WSBEiJ_G0001111.1 mouse_genomes_project 3 51820389 51821994 + TEC TEC MGP_WSBEiJ_T0013835.1 MGP_WSBEiJ_G0011965.1 mouse_genomes_project 3 102869732 102870200 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059415.1 MGP_WSBEiJ_G0026396.1 mouse_genomes_project 3 33613483 33667752 - MGP_WSBEiJ_P0059415 Ccdc144b protein_coding protein_coding MGP_WSBEiJ_T0059416.1 MGP_WSBEiJ_G0026396.1 mouse_genomes_project 3 33617045 33667737 - MGP_WSBEiJ_P0059416 Ccdc144b protein_coding protein_coding MGP_WSBEiJ_T0059417.1 MGP_WSBEiJ_G0026396.1 mouse_genomes_project 3 33623729 33667737 - MGP_WSBEiJ_P0059417 Ccdc144b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059488.1 MGP_WSBEiJ_G0026408.1 mouse_genomes_project 3 34783832 34790884 - MGP_WSBEiJ_P0059488 Il2 protein_coding protein_coding MGP_WSBEiJ_T0060277.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83340817 83496022 - MGP_WSBEiJ_P0060277 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060278.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83340818 83446644 - MGP_WSBEiJ_P0060278 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060279.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83340819 83407402 - MGP_WSBEiJ_P0060279 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060280.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83342252 83407390 - MGP_WSBEiJ_P0060280 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060281.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83343718 83396920 - MGP_WSBEiJ_P0060281 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060282.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83344080 83407358 - Trim2 protein_coding retained_intron MGP_WSBEiJ_T0060283.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83344095 83460751 - MGP_WSBEiJ_P0060283 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060285.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83357623 83372042 - Trim2 protein_coding retained_intron MGP_WSBEiJ_T0060286.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83369907 83407387 - Trim2 protein_coding retained_intron MGP_WSBEiJ_T0060287.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83372180 83373067 - Trim2 protein_coding processed_transcript MGP_WSBEiJ_T0060288.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83373722 83496610 - MGP_WSBEiJ_P0060288 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060289.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83373733 83496659 - MGP_WSBEiJ_P0060289 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060290.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83374882 83446201 - MGP_WSBEiJ_P0060290 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060291.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83390555 83407374 - Trim2 protein_coding retained_intron MGP_WSBEiJ_T0060292.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83391860 83407387 - Trim2 protein_coding retained_intron MGP_WSBEiJ_T0060293.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83392462 83407387 - MGP_WSBEiJ_P0060293 Trim2 protein_coding protein_coding MGP_WSBEiJ_T0060294.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83444515 83446201 - Trim2 protein_coding processed_transcript MGP_WSBEiJ_T0060295.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83491176 83495954 - Trim2 protein_coding processed_transcript MGP_WSBEiJ_T0060296.1 MGP_WSBEiJ_G0026582.1 mouse_genomes_project 3 83496058 83498090 - Trim2 protein_coding processed_transcript MGP_WSBEiJ_T0010356.1 MGP_WSBEiJ_G0008513.1 mouse_genomes_project 3 87927745 87927827 - Mir1905 miRNA miRNA MGP_WSBEiJ_T0061898.1 MGP_WSBEiJ_G0026954.1 mouse_genomes_project 3 105684453 105696228 + MGP_WSBEiJ_P0061898 4930564D02Rik protein_coding protein_coding MGP_WSBEiJ_T0061020.1 MGP_WSBEiJ_G0026724.1 mouse_genomes_project 3 90349807 90365630 + MGP_WSBEiJ_P0061020 Pglyrp4 protein_coding protein_coding MGP_WSBEiJ_T0061021.1 MGP_WSBEiJ_G0026724.1 mouse_genomes_project 3 90349812 90364627 + MGP_WSBEiJ_P0061021 Pglyrp4 protein_coding protein_coding MGP_WSBEiJ_T0061022.1 MGP_WSBEiJ_G0026724.1 mouse_genomes_project 3 90361362 90365628 + Pglyrp4 protein_coding processed_transcript MGP_WSBEiJ_T0007474.1 MGP_WSBEiJ_G0006123.1 mouse_genomes_project 3 82254402 82258376 - Gm10710 lincRNA lincRNA MGP_WSBEiJ_T0007523.1 MGP_WSBEiJ_G0006159.1 mouse_genomes_project 3 102199834 102201691 + Gm43134 lincRNA lincRNA MGP_WSBEiJ_T0097502.1 MGP_WSBEiJ_G0036166.1 mouse_genomes_project 3 91815002 91860246 - 4930511M18Rik sense_overlapping sense_overlapping MGP_WSBEiJ_T0013961.1 MGP_WSBEiJ_G0012091.1 mouse_genomes_project 3 144954782 144955844 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061177.1 MGP_WSBEiJ_G0026797.1 mouse_genomes_project 3 94841918 94852758 + MGP_WSBEiJ_P0061177 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061178.1 MGP_WSBEiJ_G0026797.1 mouse_genomes_project 3 94841928 94847586 + protein_coding retained_intron MGP_WSBEiJ_T0061179.1 MGP_WSBEiJ_G0026797.1 mouse_genomes_project 3 94841982 94852758 + MGP_WSBEiJ_P0061179 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061180.1 MGP_WSBEiJ_G0026797.1 mouse_genomes_project 3 94842021 94846230 + protein_coding processed_transcript MGP_WSBEiJ_T0061181.1 MGP_WSBEiJ_G0026797.1 mouse_genomes_project 3 94846190 94852780 + MGP_WSBEiJ_P0061181 protein_coding unknown_likely_coding MGP_WSBEiJ_T0100773.1 MGP_WSBEiJ_G0039231.1 mouse_genomes_project 3 86873674 86874199 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001182.1 MGP_WSBEiJ_G0001112.1 mouse_genomes_project 3 53514736 53516869 + TEC TEC MGP_WSBEiJ_T0001199.1 MGP_WSBEiJ_G0001129.1 mouse_genomes_project 3 61910949 61911435 + TEC TEC MGP_WSBEiJ_T0001137.1 MGP_WSBEiJ_G0001069.1 mouse_genomes_project 3 43038164 43040751 - TEC TEC MGP_WSBEiJ_T0060709.1 MGP_WSBEiJ_G0026664.1 mouse_genomes_project 3 88680426 88686180 + MGP_WSBEiJ_P0060709 Gba protein_coding protein_coding MGP_WSBEiJ_T0060710.1 MGP_WSBEiJ_G0026664.1 mouse_genomes_project 3 88680434 88686182 + MGP_WSBEiJ_P0060710 Gba protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060711.1 MGP_WSBEiJ_G0026664.1 mouse_genomes_project 3 88680438 88686182 + MGP_WSBEiJ_P0060711 Gba protein_coding protein_coding MGP_WSBEiJ_T0060712.1 MGP_WSBEiJ_G0026664.1 mouse_genomes_project 3 88682985 88683889 + Gba protein_coding retained_intron MGP_WSBEiJ_T0060713.1 MGP_WSBEiJ_G0026664.1 mouse_genomes_project 3 88685717 88686467 + Gba protein_coding retained_intron MGP_WSBEiJ_T0059036.1 MGP_WSBEiJ_G0026330.1 mouse_genomes_project 3 15113924 15294821 - MGP_WSBEiJ_P0059036 Cyp7b1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0007630.1 MGP_WSBEiJ_G0006247.1 mouse_genomes_project 3 146243050 146243951 + Gm42708 lincRNA lincRNA MGP_WSBEiJ_T0061938.1 MGP_WSBEiJ_G0026965.1 mouse_genomes_project 3 106639902 106662316 - MGP_WSBEiJ_P0061938 Pifo protein_coding protein_coding MGP_WSBEiJ_T0061939.1 MGP_WSBEiJ_G0026965.1 mouse_genomes_project 3 106639911 106645290 - MGP_WSBEiJ_P0061939 Pifo protein_coding protein_coding MGP_WSBEiJ_T0007616.1 MGP_WSBEiJ_G0006235.1 mouse_genomes_project 3 145543044 145560018 + A830019L24Rik lincRNA lincRNA MGP_WSBEiJ_T0007617.1 MGP_WSBEiJ_G0006235.1 mouse_genomes_project 3 145543519 145561906 + A830019L24Rik lincRNA lincRNA MGP_WSBEiJ_T0013648.1 MGP_WSBEiJ_G0011778.1 mouse_genomes_project 3 44238745 44239464 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059030.1 MGP_WSBEiJ_G0026327.1 mouse_genomes_project 3 13218361 13261903 + MGP_WSBEiJ_P0059030 Ythdf3 protein_coding protein_coding MGP_WSBEiJ_T0059031.1 MGP_WSBEiJ_G0026327.1 mouse_genomes_project 3 13218385 13248436 + Ythdf3 protein_coding processed_transcript MGP_WSBEiJ_T0059032.1 MGP_WSBEiJ_G0026327.1 mouse_genomes_project 3 13218385 13259871 + MGP_WSBEiJ_P0059032 Ythdf3 protein_coding protein_coding MGP_WSBEiJ_T0059033.1 MGP_WSBEiJ_G0026327.1 mouse_genomes_project 3 13218385 13261721 + MGP_WSBEiJ_P0059033 Ythdf3 protein_coding protein_coding MGP_WSBEiJ_T0011346.1 MGP_WSBEiJ_G0009503.1 mouse_genomes_project 3 96432962 96433385 - Terc misc_RNA misc_RNA MGP_WSBEiJ_T0063018.1 MGP_WSBEiJ_G0027183.1 mouse_genomes_project 3 146543063 146557685 - MGP_WSBEiJ_P0063018 Lmo4 protein_coding protein_coding MGP_WSBEiJ_T0063019.1 MGP_WSBEiJ_G0027183.1 mouse_genomes_project 3 146543063 146560494 - MGP_WSBEiJ_P0063019 Lmo4 protein_coding protein_coding MGP_WSBEiJ_T0063020.1 MGP_WSBEiJ_G0027183.1 mouse_genomes_project 3 146543165 146557621 - MGP_WSBEiJ_P0063020 Lmo4 protein_coding protein_coding MGP_WSBEiJ_T0063021.1 MGP_WSBEiJ_G0027183.1 mouse_genomes_project 3 146543216 146560494 - MGP_WSBEiJ_P0063021 Lmo4 protein_coding protein_coding MGP_WSBEiJ_T0063022.1 MGP_WSBEiJ_G0027183.1 mouse_genomes_project 3 146543595 146549298 - Lmo4 protein_coding retained_intron MGP_WSBEiJ_T0063023.1 MGP_WSBEiJ_G0027183.1 mouse_genomes_project 3 146548467 146558251 - MGP_WSBEiJ_P0063023 Lmo4 protein_coding protein_coding MGP_WSBEiJ_T0063024.1 MGP_WSBEiJ_G0027183.1 mouse_genomes_project 3 146556071 146560454 - Lmo4 protein_coding retained_intron MGP_WSBEiJ_T0063025.1 MGP_WSBEiJ_G0027183.1 mouse_genomes_project 3 146556911 146557589 - Lmo4 protein_coding retained_intron MGP_WSBEiJ_T0001254.1 MGP_WSBEiJ_G0001184.1 mouse_genomes_project 3 109352274 109353705 + TEC TEC MGP_WSBEiJ_T0061714.1 MGP_WSBEiJ_G0026920.1 mouse_genomes_project 3 103215322 103252574 + MGP_WSBEiJ_P0061714 Tspan2 protein_coding protein_coding MGP_WSBEiJ_T0061715.1 MGP_WSBEiJ_G0026920.1 mouse_genomes_project 3 103215540 103249539 + MGP_WSBEiJ_P0061715 Tspan2 protein_coding protein_coding MGP_WSBEiJ_T0061716.1 MGP_WSBEiJ_G0026920.1 mouse_genomes_project 3 103239639 103287983 + MGP_WSBEiJ_P0061716 Tspan2 protein_coding protein_coding MGP_WSBEiJ_T0061066.1 MGP_WSBEiJ_G0026762.1 mouse_genomes_project 3 92571238 92575453 - MGP_WSBEiJ_P0061066 Kprp protein_coding protein_coding MGP_WSBEiJ_T0001244.1 MGP_WSBEiJ_G0001174.1 mouse_genomes_project 3 98288212 98291274 + TEC TEC MGP_WSBEiJ_T0010368.1 MGP_WSBEiJ_G0008525.1 mouse_genomes_project 3 99521180 99521290 - Mir6481 miRNA miRNA MGP_WSBEiJ_T0007582.1 MGP_WSBEiJ_G0006204.1 mouse_genomes_project 3 132572025 132573817 + Gm43522 lincRNA lincRNA MGP_WSBEiJ_T0007583.1 MGP_WSBEiJ_G0006204.1 mouse_genomes_project 3 132572953 132574876 + Gm43522 lincRNA lincRNA MGP_WSBEiJ_T0098160.1 MGP_WSBEiJ_G0036823.1 mouse_genomes_project 3 53740749 53740856 + Gm25404 snRNA snRNA MGP_WSBEiJ_T0013714.1 MGP_WSBEiJ_G0011844.1 mouse_genomes_project 3 62633171 62633420 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060186.1 MGP_WSBEiJ_G0026557.1 mouse_genomes_project 3 78675115 78683651 + MGP_WSBEiJ_P0060186 4930579G24Rik protein_coding protein_coding MGP_WSBEiJ_T0004323.1 MGP_WSBEiJ_G0003771.1 mouse_genomes_project 3 151631815 151646705 + Gm43573 antisense antisense MGP_WSBEiJ_T0007395.1 MGP_WSBEiJ_G0006064.1 mouse_genomes_project 3 35591595 35683185 + lincRNA lincRNA MGP_WSBEiJ_T0004141.1 MGP_WSBEiJ_G0003649.1 mouse_genomes_project 3 33536207 33596307 + Gm15952 antisense antisense MGP_WSBEiJ_T0004142.1 MGP_WSBEiJ_G0003649.1 mouse_genomes_project 3 33536207 33545872 + Gm15952 antisense antisense MGP_WSBEiJ_T0004143.1 MGP_WSBEiJ_G0003649.1 mouse_genomes_project 3 33536219 33541208 + Gm15952 antisense antisense MGP_WSBEiJ_T0007430.1 MGP_WSBEiJ_G0006089.1 mouse_genomes_project 3 51805375 51817214 + lincRNA lincRNA MGP_WSBEiJ_T0062818.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137370959 137474404 + MGP_WSBEiJ_P0062818 Manba protein_coding protein_coding MGP_WSBEiJ_T0062819.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137370959 137457604 + MGP_WSBEiJ_P0062819 Manba protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062820.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137370967 137457561 + Manba protein_coding retained_intron MGP_WSBEiJ_T0062821.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137370973 137408635 + Manba protein_coding retained_intron MGP_WSBEiJ_T0062822.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137412949 137440821 + Manba protein_coding processed_transcript MGP_WSBEiJ_T0062823.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137421294 137422919 + Manba protein_coding processed_transcript MGP_WSBEiJ_T0062824.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137444557 137450921 + Manba protein_coding retained_intron MGP_WSBEiJ_T0062825.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137448274 137456803 + Manba protein_coding processed_transcript MGP_WSBEiJ_T0062826.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137449952 137458795 + Manba protein_coding processed_transcript MGP_WSBEiJ_T0062827.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137450022 137466189 + Manba protein_coding processed_transcript MGP_WSBEiJ_T0062828.1 MGP_WSBEiJ_G0027143.1 mouse_genomes_project 3 137466149 137470553 + Manba protein_coding processed_transcript MGP_WSBEiJ_T0013959.1 MGP_WSBEiJ_G0012089.1 mouse_genomes_project 3 144603879 144603973 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017405.1 MGP_WSBEiJ_G0014943.1 mouse_genomes_project 3 119695669 119699295 + Gm26871 processed_transcript lincRNA MGP_WSBEiJ_T0017406.1 MGP_WSBEiJ_G0014943.1 mouse_genomes_project 3 119699132 119792807 + Gm26871 processed_transcript lincRNA MGP_WSBEiJ_T0017407.1 MGP_WSBEiJ_G0014943.1 mouse_genomes_project 3 119699257 119794899 + Gm26871 processed_transcript lincRNA MGP_WSBEiJ_T0017408.1 MGP_WSBEiJ_G0014943.1 mouse_genomes_project 3 119699268 119746483 + Gm26871 processed_transcript lincRNA MGP_WSBEiJ_T0017409.1 MGP_WSBEiJ_G0014943.1 mouse_genomes_project 3 119699301 119809692 + Gm26871 processed_transcript lincRNA MGP_WSBEiJ_T0017410.1 MGP_WSBEiJ_G0014943.1 mouse_genomes_project 3 119730887 119733919 + Gm26871 processed_transcript retained_intron MGP_WSBEiJ_T0001212.1 MGP_WSBEiJ_G0001142.1 mouse_genomes_project 3 74592239 74592752 - TEC TEC MGP_WSBEiJ_T0098187.1 MGP_WSBEiJ_G0036850.1 mouse_genomes_project 3 89768281 89768386 + Gm24185 snRNA snRNA MGP_WSBEiJ_T0001127.1 MGP_WSBEiJ_G0001059.1 mouse_genomes_project 3 36109258 36110439 - TEC TEC MGP_WSBEiJ_T0060265.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83067394 83220151 - MGP_WSBEiJ_P0060265 D930015E06Rik protein_coding protein_coding MGP_WSBEiJ_T0060266.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83067948 83220113 - MGP_WSBEiJ_P0060266 D930015E06Rik protein_coding protein_coding MGP_WSBEiJ_T0060267.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83067948 83220151 - MGP_WSBEiJ_P0060267 D930015E06Rik protein_coding protein_coding MGP_WSBEiJ_T0060268.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83067949 83081023 - D930015E06Rik protein_coding processed_transcript MGP_WSBEiJ_T0060269.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83072143 83079393 - D930015E06Rik protein_coding retained_intron MGP_WSBEiJ_T0060270.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83072157 83081349 - D930015E06Rik protein_coding retained_intron MGP_WSBEiJ_T0060271.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83093177 83143824 - D930015E06Rik protein_coding processed_transcript MGP_WSBEiJ_T0060272.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83114951 83119580 - D930015E06Rik protein_coding processed_transcript MGP_WSBEiJ_T0060273.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83210309 83220104 - D930015E06Rik protein_coding retained_intron MGP_WSBEiJ_T0060274.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83217153 83220137 - D930015E06Rik protein_coding retained_intron MGP_WSBEiJ_T0060275.1 MGP_WSBEiJ_G0026580.1 mouse_genomes_project 3 83217351 83220110 - D930015E06Rik protein_coding retained_intron MGP_WSBEiJ_T0060419.1 MGP_WSBEiJ_G0026614.1 mouse_genomes_project 3 87254756 87264273 + MGP_WSBEiJ_P0060419 Hdgf protein_coding protein_coding MGP_WSBEiJ_T0060420.1 MGP_WSBEiJ_G0026614.1 mouse_genomes_project 3 87255179 87262789 + MGP_WSBEiJ_P0060420 Hdgf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060421.1 MGP_WSBEiJ_G0026614.1 mouse_genomes_project 3 87255661 87262306 + Hdgf protein_coding processed_transcript MGP_WSBEiJ_T0060422.1 MGP_WSBEiJ_G0026614.1 mouse_genomes_project 3 87258173 87262322 + Hdgf protein_coding processed_transcript MGP_WSBEiJ_T0060423.1 MGP_WSBEiJ_G0026614.1 mouse_genomes_project 3 87262100 87262917 + Hdgf protein_coding retained_intron MGP_WSBEiJ_T0099425.1 MGP_WSBEiJ_G0038088.1 mouse_genomes_project 3 35685563 35685694 - Gm22899 snoRNA snoRNA MGP_WSBEiJ_T0059061.1 MGP_WSBEiJ_G0026336.1 mouse_genomes_project 3 16740991 16783965 + MGP_WSBEiJ_P0059061 Trim55 protein_coding protein_coding MGP_WSBEiJ_T0059062.1 MGP_WSBEiJ_G0026336.1 mouse_genomes_project 3 16741025 16746571 + Trim55 protein_coding processed_transcript MGP_WSBEiJ_T0059312.1 MGP_WSBEiJ_G0026382.1 mouse_genomes_project 3 30039370 30076370 - MGP_WSBEiJ_P0059312 Gnb4 protein_coding protein_coding MGP_WSBEiJ_T0059313.1 MGP_WSBEiJ_G0026382.1 mouse_genomes_project 3 30043036 30076310 - Gnb4 protein_coding retained_intron MGP_WSBEiJ_T0059314.1 MGP_WSBEiJ_G0026382.1 mouse_genomes_project 3 30043036 30076302 - MGP_WSBEiJ_P0059314 Gnb4 protein_coding protein_coding MGP_WSBEiJ_T0059315.1 MGP_WSBEiJ_G0026382.1 mouse_genomes_project 3 30044093 30076307 - MGP_WSBEiJ_P0059315 Gnb4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059316.1 MGP_WSBEiJ_G0026382.1 mouse_genomes_project 3 30046744 30057223 - Gnb4 protein_coding retained_intron MGP_WSBEiJ_T0059317.1 MGP_WSBEiJ_G0026382.1 mouse_genomes_project 3 30050172 30076264 - MGP_WSBEiJ_P0059317 Gnb4 protein_coding protein_coding MGP_WSBEiJ_T0059318.1 MGP_WSBEiJ_G0026382.1 mouse_genomes_project 3 30051249 30076310 - Gnb4 protein_coding retained_intron MGP_WSBEiJ_T0059319.1 MGP_WSBEiJ_G0026382.1 mouse_genomes_project 3 30058888 30076314 - Gnb4 protein_coding retained_intron MGP_WSBEiJ_T0061033.1 MGP_WSBEiJ_G0026733.1 mouse_genomes_project 3 92062530 92063969 + MGP_WSBEiJ_P0061033 Sprr2b protein_coding protein_coding MGP_WSBEiJ_T0004188.1 MGP_WSBEiJ_G0003683.1 mouse_genomes_project 3 82931193 82948804 - Gm26771 antisense antisense MGP_WSBEiJ_T0013913.1 MGP_WSBEiJ_G0012043.1 mouse_genomes_project 3 131016531 131017295 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001226.1 MGP_WSBEiJ_G0001156.1 mouse_genomes_project 3 88687931 88690674 + TEC TEC MGP_WSBEiJ_T0013941.1 MGP_WSBEiJ_G0012071.1 mouse_genomes_project 3 138928852 138929168 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098202.1 MGP_WSBEiJ_G0036865.1 mouse_genomes_project 3 103966801 103966908 - Gm25199 snRNA snRNA MGP_WSBEiJ_T0001155.1 MGP_WSBEiJ_G0001087.1 mouse_genomes_project 3 49493484 49495981 - TEC TEC MGP_WSBEiJ_T0063374.1 MGP_WSBEiJ_G0027244.1 mouse_genomes_project 3 160569316 160583553 + MGP_WSBEiJ_P0063374 Zranb2 protein_coding protein_coding MGP_WSBEiJ_T0063375.1 MGP_WSBEiJ_G0027244.1 mouse_genomes_project 3 160569515 160583479 + MGP_WSBEiJ_P0063375 Zranb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063376.1 MGP_WSBEiJ_G0027244.1 mouse_genomes_project 3 160569515 160583479 + MGP_WSBEiJ_P0063376 Zranb2 protein_coding protein_coding MGP_WSBEiJ_T0063377.1 MGP_WSBEiJ_G0027244.1 mouse_genomes_project 3 160569532 160578347 + MGP_WSBEiJ_P0063377 Zranb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063378.1 MGP_WSBEiJ_G0027244.1 mouse_genomes_project 3 160569544 160583519 + MGP_WSBEiJ_P0063378 Zranb2 protein_coding protein_coding MGP_WSBEiJ_T0063379.1 MGP_WSBEiJ_G0027244.1 mouse_genomes_project 3 160569581 160582066 + Zranb2 protein_coding retained_intron MGP_WSBEiJ_T0063380.1 MGP_WSBEiJ_G0027244.1 mouse_genomes_project 3 160574198 160576911 + Zranb2 protein_coding retained_intron MGP_WSBEiJ_T0063381.1 MGP_WSBEiJ_G0027244.1 mouse_genomes_project 3 160575799 160581946 + MGP_WSBEiJ_P0063381 Zranb2 protein_coding protein_coding MGP_WSBEiJ_T0004160.1 MGP_WSBEiJ_G0003663.1 mouse_genomes_project 3 51180175 51183256 - Gm43803 antisense antisense MGP_WSBEiJ_T0004161.1 MGP_WSBEiJ_G0003663.1 mouse_genomes_project 3 51180192 51181497 - Gm43803 antisense antisense MGP_WSBEiJ_T0001328.1 MGP_WSBEiJ_G0001257.1 mouse_genomes_project 3 137777708 137779959 + TEC TEC MGP_WSBEiJ_T0004171.1 MGP_WSBEiJ_G0003671.1 mouse_genomes_project 3 59732992 59737233 - Gm37696 antisense antisense MGP_WSBEiJ_T0063141.1 MGP_WSBEiJ_G0027211.1 mouse_genomes_project 3 149209289 149215412 - MGP_WSBEiJ_P0063141 4930503B20Rik protein_coding protein_coding MGP_WSBEiJ_T0063146.1 MGP_WSBEiJ_G0027211.1 mouse_genomes_project 3 149210353 149212401 - 4930503B20Rik protein_coding processed_transcript MGP_WSBEiJ_T0063147.1 MGP_WSBEiJ_G0027211.1 mouse_genomes_project 3 149213660 149215410 - MGP_WSBEiJ_P0063147 4930503B20Rik protein_coding protein_coding MGP_WSBEiJ_T0013568.1 MGP_WSBEiJ_G0011698.1 mouse_genomes_project 3 14310545 14311884 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007568.1 MGP_WSBEiJ_G0006193.1 mouse_genomes_project 3 123734182 123744350 + Gm40190 lincRNA lincRNA MGP_WSBEiJ_T0058998.1 MGP_WSBEiJ_G0026315.1 mouse_genomes_project 3 11511932 11552304 + MGP_WSBEiJ_P0058998 Lrrcc1 protein_coding protein_coding MGP_WSBEiJ_T0058999.1 MGP_WSBEiJ_G0026315.1 mouse_genomes_project 3 11511967 11546506 + MGP_WSBEiJ_P0058999 Lrrcc1 protein_coding protein_coding MGP_WSBEiJ_T0059000.1 MGP_WSBEiJ_G0026315.1 mouse_genomes_project 3 11511968 11544308 + MGP_WSBEiJ_P0059000 Lrrcc1 protein_coding protein_coding MGP_WSBEiJ_T0059001.1 MGP_WSBEiJ_G0026315.1 mouse_genomes_project 3 11512023 11540353 + MGP_WSBEiJ_P0059001 Lrrcc1 protein_coding protein_coding MGP_WSBEiJ_T0059002.1 MGP_WSBEiJ_G0026315.1 mouse_genomes_project 3 11512078 11529660 + MGP_WSBEiJ_P0059002 Lrrcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059003.1 MGP_WSBEiJ_G0026315.1 mouse_genomes_project 3 11526306 11544611 + MGP_WSBEiJ_P0059003 Lrrcc1 protein_coding protein_coding MGP_WSBEiJ_T0059004.1 MGP_WSBEiJ_G0026315.1 mouse_genomes_project 3 11526382 11532660 + MGP_WSBEiJ_P0059004 Lrrcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059005.1 MGP_WSBEiJ_G0026315.1 mouse_genomes_project 3 11528566 11537512 + MGP_WSBEiJ_P0059005 Lrrcc1 protein_coding protein_coding MGP_WSBEiJ_T0004291.1 MGP_WSBEiJ_G0003749.1 mouse_genomes_project 3 129504291 129506015 + Gm43653 antisense antisense MGP_WSBEiJ_T0010385.1 MGP_WSBEiJ_G0008542.1 mouse_genomes_project 3 136097514 136097593 - Mir1895 miRNA miRNA MGP_WSBEiJ_T0063369.1 MGP_WSBEiJ_G0027243.1 mouse_genomes_project 3 159583896 160347003 + MGP_WSBEiJ_P0063369 Negr1 protein_coding protein_coding MGP_WSBEiJ_T0063370.1 MGP_WSBEiJ_G0027243.1 mouse_genomes_project 3 159584061 160199718 + MGP_WSBEiJ_P0063370 Negr1 protein_coding protein_coding MGP_WSBEiJ_T0063371.1 MGP_WSBEiJ_G0027243.1 mouse_genomes_project 3 159584071 160229060 + MGP_WSBEiJ_P0063371 Negr1 protein_coding protein_coding MGP_WSBEiJ_T0063372.1 MGP_WSBEiJ_G0027243.1 mouse_genomes_project 3 159584248 159589333 + Negr1 protein_coding retained_intron MGP_WSBEiJ_T0063373.1 MGP_WSBEiJ_G0027243.1 mouse_genomes_project 3 159584252 160036812 + MGP_WSBEiJ_P0063373 Negr1 protein_coding protein_coding MGP_WSBEiJ_T0063389.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 160984647 161047818 + MGP_WSBEiJ_P0063389 Ankrd13c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063390.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 160984822 161046096 + MGP_WSBEiJ_P0063390 Ankrd13c protein_coding protein_coding MGP_WSBEiJ_T0063391.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 160984822 161048425 + MGP_WSBEiJ_P0063391 Ankrd13c protein_coding protein_coding MGP_WSBEiJ_T0063392.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 160984874 161047014 + Ankrd13c protein_coding retained_intron MGP_WSBEiJ_T0063393.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 161023937 161030147 + Ankrd13c protein_coding retained_intron MGP_WSBEiJ_T0063394.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 161027125 161044188 + Ankrd13c protein_coding retained_intron MGP_WSBEiJ_T0063395.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 161029037 161041306 + Ankrd13c protein_coding processed_transcript MGP_WSBEiJ_T0063396.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 161029615 161041276 + Ankrd13c protein_coding retained_intron MGP_WSBEiJ_T0063397.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 161034053 161043287 + Ankrd13c protein_coding retained_intron MGP_WSBEiJ_T0063398.1 MGP_WSBEiJ_G0027247.1 mouse_genomes_project 3 161039584 161041322 + Ankrd13c protein_coding retained_intron MGP_WSBEiJ_T0001334.1 MGP_WSBEiJ_G0001263.1 mouse_genomes_project 3 143887072 143889691 + TEC TEC MGP_WSBEiJ_T0059985.1 MGP_WSBEiJ_G0026512.1 mouse_genomes_project 3 63662112 63925431 + Kcnab1 protein_coding processed_transcript MGP_WSBEiJ_T0059986.1 MGP_WSBEiJ_G0026512.1 mouse_genomes_project 3 63662112 63937927 + MGP_WSBEiJ_P0059986 Kcnab1 protein_coding protein_coding MGP_WSBEiJ_T0059987.1 MGP_WSBEiJ_G0026512.1 mouse_genomes_project 3 63741462 63937931 + Kcnab1 protein_coding processed_transcript MGP_WSBEiJ_T0059988.1 MGP_WSBEiJ_G0026512.1 mouse_genomes_project 3 63807453 63936792 + Kcnab1 protein_coding processed_transcript MGP_WSBEiJ_T0059989.1 MGP_WSBEiJ_G0026512.1 mouse_genomes_project 3 63851831 63915989 + Kcnab1 protein_coding processed_transcript MGP_WSBEiJ_T0059990.1 MGP_WSBEiJ_G0026512.1 mouse_genomes_project 3 63912660 63917724 + Kcnab1 protein_coding retained_intron MGP_WSBEiJ_T0062772.1 MGP_WSBEiJ_G0027135.1 mouse_genomes_project 3 136092537 136117225 + protein_coding processed_transcript MGP_WSBEiJ_T0062773.1 MGP_WSBEiJ_G0027135.1 mouse_genomes_project 3 136092544 136119778 + MGP_WSBEiJ_P0062773 protein_coding protein_coding MGP_WSBEiJ_T0062774.1 MGP_WSBEiJ_G0027135.1 mouse_genomes_project 3 136092548 136094438 + protein_coding retained_intron MGP_WSBEiJ_T0062775.1 MGP_WSBEiJ_G0027135.1 mouse_genomes_project 3 136092873 136115836 + MGP_WSBEiJ_P0062775 protein_coding protein_coding MGP_WSBEiJ_T0062776.1 MGP_WSBEiJ_G0027135.1 mouse_genomes_project 3 136097599 136103927 + protein_coding retained_intron MGP_WSBEiJ_T0013820.1 MGP_WSBEiJ_G0011950.1 mouse_genomes_project 3 99162076 99162331 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097374.1 MGP_WSBEiJ_G0036048.1 mouse_genomes_project 3 105575074 105576010 - Gm43846 sense_intronic sense_intronic MGP_WSBEiJ_T0059268.1 MGP_WSBEiJ_G0026373.1 mouse_genomes_project 3 28517163 28545659 + MGP_WSBEiJ_P0059268 Skil protein_coding protein_coding MGP_WSBEiJ_T0059269.1 MGP_WSBEiJ_G0026373.1 mouse_genomes_project 3 28517166 28523501 + Skil protein_coding retained_intron MGP_WSBEiJ_T0059270.1 MGP_WSBEiJ_G0026373.1 mouse_genomes_project 3 28517166 28545663 + MGP_WSBEiJ_P0059270 Skil protein_coding protein_coding MGP_WSBEiJ_T0059271.1 MGP_WSBEiJ_G0026373.1 mouse_genomes_project 3 28517170 28519998 + MGP_WSBEiJ_P0059271 Skil protein_coding protein_coding MGP_WSBEiJ_T0059272.1 MGP_WSBEiJ_G0026373.1 mouse_genomes_project 3 28517230 28541337 + MGP_WSBEiJ_P0059272 Skil protein_coding protein_coding MGP_WSBEiJ_T0059273.1 MGP_WSBEiJ_G0026373.1 mouse_genomes_project 3 28518938 28541048 + MGP_WSBEiJ_P0059273 Skil protein_coding protein_coding MGP_WSBEiJ_T0059274.1 MGP_WSBEiJ_G0026373.1 mouse_genomes_project 3 28519436 28540670 + MGP_WSBEiJ_P0059274 Skil protein_coding unknown_likely_coding MGP_WSBEiJ_T0059612.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417823 39434227 + MGP_WSBEiJ_P0059612 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059613.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417875 39431618 + MGP_WSBEiJ_P0059613 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059614.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417878 39434217 + MGP_WSBEiJ_P0059614 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059615.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417881 39434676 + MGP_WSBEiJ_P0059615 D3Ertd751e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059616.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417882 39434226 + MGP_WSBEiJ_P0059616 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059617.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417882 39434226 + MGP_WSBEiJ_P0059617 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059618.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417918 39434226 + MGP_WSBEiJ_P0059618 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059619.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417920 39419184 + D3Ertd751e protein_coding retained_intron MGP_WSBEiJ_T0059620.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417927 39432947 + MGP_WSBEiJ_P0059620 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059621.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39417989 39429051 + MGP_WSBEiJ_P0059621 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059622.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39419936 39431442 + MGP_WSBEiJ_P0059622 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059623.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39421751 39431458 + MGP_WSBEiJ_P0059623 D3Ertd751e protein_coding protein_coding MGP_WSBEiJ_T0059624.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39421981 39434244 + MGP_WSBEiJ_P0059624 D3Ertd751e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059625.1 MGP_WSBEiJ_G0026430.1 mouse_genomes_project 3 39423849 39431793 + D3Ertd751e protein_coding retained_intron MGP_WSBEiJ_T0011350.1 MGP_WSBEiJ_G0009507.1 mouse_genomes_project 3 122698516 122698784 + Gm26027 misc_RNA misc_RNA MGP_WSBEiJ_T0007535.1 MGP_WSBEiJ_G0006169.1 mouse_genomes_project 3 106453379 106455809 + Gm5547 lincRNA lincRNA MGP_WSBEiJ_T0007536.1 MGP_WSBEiJ_G0006169.1 mouse_genomes_project 3 106453406 106455802 + Gm5547 lincRNA lincRNA MGP_WSBEiJ_T0007537.1 MGP_WSBEiJ_G0006169.1 mouse_genomes_project 3 106454581 106455810 + Gm5547 lincRNA lincRNA MGP_WSBEiJ_T0001238.1 MGP_WSBEiJ_G0001168.1 mouse_genomes_project 3 96856002 96856526 + TEC TEC MGP_WSBEiJ_T0100802.1 MGP_WSBEiJ_G0039260.1 mouse_genomes_project 3 108792242 108795377 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0060217.1 MGP_WSBEiJ_G0026564.1 mouse_genomes_project 3 81033430 81057907 + MGP_WSBEiJ_P0060217 Ctso protein_coding protein_coding MGP_WSBEiJ_T0060218.1 MGP_WSBEiJ_G0026564.1 mouse_genomes_project 3 81033452 81034154 + Ctso protein_coding retained_intron MGP_WSBEiJ_T0060219.1 MGP_WSBEiJ_G0026564.1 mouse_genomes_project 3 81033471 81043870 + Ctso protein_coding processed_transcript MGP_WSBEiJ_T0060220.1 MGP_WSBEiJ_G0026564.1 mouse_genomes_project 3 81052125 81055481 + Ctso protein_coding retained_intron MGP_WSBEiJ_T0062399.1 MGP_WSBEiJ_G0027071.1 mouse_genomes_project 3 123161496 123220241 - MGP_WSBEiJ_P0062399 Abcd3 protein_coding protein_coding MGP_WSBEiJ_T0062400.1 MGP_WSBEiJ_G0027071.1 mouse_genomes_project 3 123161629 123220377 - MGP_WSBEiJ_P0062400 Abcd3 protein_coding protein_coding MGP_WSBEiJ_T0062401.1 MGP_WSBEiJ_G0027071.1 mouse_genomes_project 3 123162479 123220241 - MGP_WSBEiJ_P0062401 Abcd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062402.1 MGP_WSBEiJ_G0027071.1 mouse_genomes_project 3 123168928 123171409 - Abcd3 protein_coding retained_intron MGP_WSBEiJ_T0062403.1 MGP_WSBEiJ_G0027071.1 mouse_genomes_project 3 123188676 123219984 - Abcd3 protein_coding processed_transcript MGP_WSBEiJ_T0062404.1 MGP_WSBEiJ_G0027071.1 mouse_genomes_project 3 123200417 123220272 - Abcd3 protein_coding retained_intron MGP_WSBEiJ_T0001306.1 MGP_WSBEiJ_G0001236.1 mouse_genomes_project 3 129736701 129738666 + TEC TEC MGP_WSBEiJ_T0001307.1 MGP_WSBEiJ_G0001236.1 mouse_genomes_project 3 129736702 129738666 + TEC TEC MGP_WSBEiJ_T0001211.1 MGP_WSBEiJ_G0001141.1 mouse_genomes_project 3 74509205 74513122 + TEC TEC MGP_WSBEiJ_T0004219.1 MGP_WSBEiJ_G0003705.1 mouse_genomes_project 3 95845974 95863932 + C920021L13Rik antisense antisense MGP_WSBEiJ_T0004220.1 MGP_WSBEiJ_G0003705.1 mouse_genomes_project 3 95845977 95865081 + C920021L13Rik antisense antisense MGP_WSBEiJ_T0004221.1 MGP_WSBEiJ_G0003705.1 mouse_genomes_project 3 95845983 95849556 + C920021L13Rik antisense antisense MGP_WSBEiJ_T0001296.1 MGP_WSBEiJ_G0001226.1 mouse_genomes_project 3 128758411 128760747 - TEC TEC MGP_WSBEiJ_T0062735.1 MGP_WSBEiJ_G0027129.1 mouse_genomes_project 3 134722048 134791343 - MGP_WSBEiJ_P0062735 Npnt protein_coding protein_coding MGP_WSBEiJ_T0062736.1 MGP_WSBEiJ_G0027129.1 mouse_genomes_project 3 134722065 134791254 - MGP_WSBEiJ_P0062736 Npnt protein_coding protein_coding MGP_WSBEiJ_T0062737.1 MGP_WSBEiJ_G0027129.1 mouse_genomes_project 3 134722987 134791212 - MGP_WSBEiJ_P0062737 Npnt protein_coding protein_coding MGP_WSBEiJ_T0062738.1 MGP_WSBEiJ_G0027129.1 mouse_genomes_project 3 134724745 134791095 - MGP_WSBEiJ_P0062738 Npnt protein_coding protein_coding MGP_WSBEiJ_T0062739.1 MGP_WSBEiJ_G0027129.1 mouse_genomes_project 3 134724745 134791095 - MGP_WSBEiJ_P0062739 Npnt protein_coding protein_coding MGP_WSBEiJ_T0062740.1 MGP_WSBEiJ_G0027129.1 mouse_genomes_project 3 134731496 134746656 - Npnt protein_coding retained_intron MGP_WSBEiJ_T0001186.1 MGP_WSBEiJ_G0001116.1 mouse_genomes_project 3 54217806 54219761 - TEC TEC MGP_WSBEiJ_T0061912.1 MGP_WSBEiJ_G0026960.1 mouse_genomes_project 3 106509274 106511011 + Tmigd3 protein_coding processed_transcript MGP_WSBEiJ_T0061913.1 MGP_WSBEiJ_G0026960.1 mouse_genomes_project 3 106509278 106564952 + MGP_WSBEiJ_P0061913 Tmigd3 protein_coding protein_coding MGP_WSBEiJ_T0061914.1 MGP_WSBEiJ_G0026960.1 mouse_genomes_project 3 106509278 106564871 + MGP_WSBEiJ_P0061914 Tmigd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061915.1 MGP_WSBEiJ_G0026960.1 mouse_genomes_project 3 106509348 106510234 + Tmigd3 protein_coding processed_transcript MGP_WSBEiJ_T0061917.1 MGP_WSBEiJ_G0026960.1 mouse_genomes_project 3 106543948 106558794 + MGP_WSBEiJ_P0061917 Tmigd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061919.1 MGP_WSBEiJ_G0026960.1 mouse_genomes_project 3 106554147 106564955 + MGP_WSBEiJ_P0061919 Tmigd3 protein_coding protein_coding MGP_WSBEiJ_T0061920.1 MGP_WSBEiJ_G0026960.1 mouse_genomes_project 3 106554147 106564958 + MGP_WSBEiJ_P0061920 Tmigd3 protein_coding protein_coding MGP_WSBEiJ_T0007364.1 MGP_WSBEiJ_G0006036.1 mouse_genomes_project 3 19101431 19102228 - Gm43674 lincRNA lincRNA MGP_WSBEiJ_T0062878.1 MGP_WSBEiJ_G0027154.1 mouse_genomes_project 3 139940622 139941611 + protein_coding retained_intron MGP_WSBEiJ_T0062879.1 MGP_WSBEiJ_G0027154.1 mouse_genomes_project 3 139940668 139948913 + MGP_WSBEiJ_P0062879 protein_coding protein_coding MGP_WSBEiJ_T0062880.1 MGP_WSBEiJ_G0027154.1 mouse_genomes_project 3 139940940 139949198 + protein_coding retained_intron MGP_WSBEiJ_T0062881.1 MGP_WSBEiJ_G0027154.1 mouse_genomes_project 3 139941006 139950119 + MGP_WSBEiJ_P0062881 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062882.1 MGP_WSBEiJ_G0027154.1 mouse_genomes_project 3 139946888 139950157 + protein_coding retained_intron MGP_WSBEiJ_T0061469.1 MGP_WSBEiJ_G0026853.1 mouse_genomes_project 3 96277544 96364988 - MGP_WSBEiJ_P0061469 Fcgr1 protein_coding protein_coding MGP_WSBEiJ_T0061470.1 MGP_WSBEiJ_G0026853.1 mouse_genomes_project 3 96283196 96291288 - MGP_WSBEiJ_P0061470 Fcgr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059906.1 MGP_WSBEiJ_G0026490.1 mouse_genomes_project 3 58002240 58025944 + MGP_WSBEiJ_P0059906 Gm5538 protein_coding protein_coding MGP_WSBEiJ_T0013589.1 MGP_WSBEiJ_G0011719.1 mouse_genomes_project 3 19610883 19611653 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100794.1 MGP_WSBEiJ_G0039252.1 mouse_genomes_project 3 99127205 99129142 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001217.1 MGP_WSBEiJ_G0001147.1 mouse_genomes_project 3 77442850 77444434 - TEC TEC MGP_WSBEiJ_T0061039.1 MGP_WSBEiJ_G0026738.1 mouse_genomes_project 3 92157411 92158692 + MGP_WSBEiJ_P0061039 Sprr2i protein_coding protein_coding MGP_WSBEiJ_T0062414.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123462336 123612365 + MGP_WSBEiJ_P0062414 Abca4 protein_coding protein_coding MGP_WSBEiJ_T0062415.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123465611 123523367 + Abca4 protein_coding processed_transcript MGP_WSBEiJ_T0062416.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123497141 123511527 + Abca4 protein_coding processed_transcript MGP_WSBEiJ_T0062417.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123546195 123554367 + Abca4 protein_coding retained_intron MGP_WSBEiJ_T0062418.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123547909 123552195 + Abca4 protein_coding retained_intron MGP_WSBEiJ_T0062419.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123557772 123612367 + MGP_WSBEiJ_P0062419 Abca4 protein_coding protein_coding MGP_WSBEiJ_T0062420.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123594042 123595934 + Abca4 protein_coding retained_intron MGP_WSBEiJ_T0062421.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123595432 123601408 + Abca4 protein_coding retained_intron MGP_WSBEiJ_T0062422.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123601021 123602079 + Abca4 protein_coding processed_transcript MGP_WSBEiJ_T0062423.1 MGP_WSBEiJ_G0027073.1 mouse_genomes_project 3 123605706 123612429 + Abca4 protein_coding retained_intron MGP_WSBEiJ_T0013766.1 MGP_WSBEiJ_G0011896.1 mouse_genomes_project 3 80667943 80668728 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007589.1 MGP_WSBEiJ_G0006210.1 mouse_genomes_project 3 134271872 134274135 - Gm42880 lincRNA lincRNA MGP_WSBEiJ_T0001360.1 MGP_WSBEiJ_G0001289.1 mouse_genomes_project 3 160238218 160239417 - TEC TEC MGP_WSBEiJ_T0007515.1 MGP_WSBEiJ_G0006151.1 mouse_genomes_project 3 98051449 98061418 - Gm15999 lincRNA lincRNA MGP_WSBEiJ_T0013857.1 MGP_WSBEiJ_G0011987.1 mouse_genomes_project 3 109241725 109242104 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007441.1 MGP_WSBEiJ_G0006096.1 mouse_genomes_project 3 56953510 57051494 + 4930593A02Rik lincRNA lincRNA MGP_WSBEiJ_T0007442.1 MGP_WSBEiJ_G0006096.1 mouse_genomes_project 3 56995926 57061086 + 4930593A02Rik lincRNA lincRNA MGP_WSBEiJ_T0061466.1 MGP_WSBEiJ_G0026850.1 mouse_genomes_project 3 96236067 96238009 - MGP_WSBEiJ_P0061466 Hist2h2aa2 protein_coding protein_coding MGP_WSBEiJ_T0013522.1 MGP_WSBEiJ_G0011652.1 mouse_genomes_project 3 2917386 2917802 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061018.1 MGP_WSBEiJ_G0026723.1 mouse_genomes_project 3 90312498 90316765 - MGP_WSBEiJ_P0061018 S100a9 protein_coding protein_coding MGP_WSBEiJ_T0061019.1 MGP_WSBEiJ_G0026723.1 mouse_genomes_project 3 90312498 90316775 - MGP_WSBEiJ_P0061019 S100a9 protein_coding protein_coding MGP_WSBEiJ_T0001319.1 MGP_WSBEiJ_G0001248.1 mouse_genomes_project 3 133401647 133404971 - TEC TEC MGP_WSBEiJ_T0007638.1 MGP_WSBEiJ_G0006253.1 mouse_genomes_project 3 148908019 148919851 - Gm10636 lincRNA lincRNA MGP_WSBEiJ_T0099474.1 MGP_WSBEiJ_G0038137.1 mouse_genomes_project 3 126013508 126013638 + Gm22900 snoRNA snoRNA MGP_WSBEiJ_T0099436.1 MGP_WSBEiJ_G0038099.1 mouse_genomes_project 3 62809105 62809263 - Gm23897 snoRNA snoRNA MGP_WSBEiJ_T0004295.1 MGP_WSBEiJ_G0003752.1 mouse_genomes_project 3 131507536 131512229 + Gm42650 antisense antisense MGP_WSBEiJ_T0059234.1 MGP_WSBEiJ_G0026367.1 mouse_genomes_project 3 28077957 28099263 - MGP_WSBEiJ_P0059234 Lrrc31 protein_coding protein_coding MGP_WSBEiJ_T0059235.1 MGP_WSBEiJ_G0026367.1 mouse_genomes_project 3 28081578 28099276 - MGP_WSBEiJ_P0059235 Lrrc31 protein_coding protein_coding MGP_WSBEiJ_T0059236.1 MGP_WSBEiJ_G0026367.1 mouse_genomes_project 3 28097374 28099201 - Lrrc31 protein_coding retained_intron MGP_WSBEiJ_T0059237.1 MGP_WSBEiJ_G0026367.1 mouse_genomes_project 3 28097549 28099243 - Lrrc31 protein_coding processed_transcript MGP_WSBEiJ_T0013698.1 MGP_WSBEiJ_G0011828.1 mouse_genomes_project 3 58009318 58009460 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013597.1 MGP_WSBEiJ_G0011727.1 mouse_genomes_project 3 24513248 24513517 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059640.1 MGP_WSBEiJ_G0026434.1 mouse_genomes_project 3 47901440 48467719 - MGP_WSBEiJ_P0059640 Slc7a11 protein_coding protein_coding MGP_WSBEiJ_T0059641.1 MGP_WSBEiJ_G0026434.1 mouse_genomes_project 3 48385323 48467716 - MGP_WSBEiJ_P0059641 Slc7a11 protein_coding protein_coding MGP_WSBEiJ_T0059642.1 MGP_WSBEiJ_G0026434.1 mouse_genomes_project 3 48390209 48391159 - Slc7a11 protein_coding processed_transcript MGP_WSBEiJ_T0059643.1 MGP_WSBEiJ_G0026434.1 mouse_genomes_project 3 48437496 48467719 - Slc7a11 protein_coding retained_intron MGP_WSBEiJ_T0059644.1 MGP_WSBEiJ_G0026434.1 mouse_genomes_project 3 48465020 48467710 - Slc7a11 protein_coding retained_intron MGP_WSBEiJ_T0013757.1 MGP_WSBEiJ_G0011887.1 mouse_genomes_project 3 77112226 77112775 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007664.1 MGP_WSBEiJ_G0006270.1 mouse_genomes_project 3 158976330 159008451 + 9330178D15Rik lincRNA lincRNA MGP_WSBEiJ_T0061074.1 MGP_WSBEiJ_G0026770.1 mouse_genomes_project 3 92789903 92791386 - MGP_WSBEiJ_P0061074 Crct1 protein_coding protein_coding MGP_WSBEiJ_T0061075.1 MGP_WSBEiJ_G0026770.1 mouse_genomes_project 3 92790217 92791368 - MGP_WSBEiJ_P0061075 Crct1 protein_coding protein_coding MGP_WSBEiJ_T0059549.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38422165 38444809 + MGP_WSBEiJ_P0059549 Plk4 protein_coding protein_coding MGP_WSBEiJ_T0059550.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38422174 38430341 + Plk4 protein_coding retained_intron MGP_WSBEiJ_T0059551.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38422188 38423771 + Plk4 protein_coding retained_intron MGP_WSBEiJ_T0059552.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38422188 38444677 + MGP_WSBEiJ_P0059552 Plk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059553.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38422196 38428180 + Plk4 protein_coding retained_intron MGP_WSBEiJ_T0059554.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38422200 38444809 + MGP_WSBEiJ_P0059554 Plk4 protein_coding protein_coding MGP_WSBEiJ_T0059555.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38422400 38444343 + MGP_WSBEiJ_P0059555 Plk4 protein_coding protein_coding MGP_WSBEiJ_T0059556.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38422927 38427128 + MGP_WSBEiJ_P0059556 Plk4 protein_coding protein_coding MGP_WSBEiJ_T0059557.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38423610 38424192 + Plk4 protein_coding retained_intron MGP_WSBEiJ_T0059558.1 MGP_WSBEiJ_G0026422.1 mouse_genomes_project 3 38440663 38444808 + MGP_WSBEiJ_P0059558 Plk4 protein_coding protein_coding MGP_WSBEiJ_T0061015.1 MGP_WSBEiJ_G0026721.1 mouse_genomes_project 3 90271591 90277220 + MGP_WSBEiJ_P0061015 S100a7a protein_coding protein_coding MGP_WSBEiJ_T0013960.1 MGP_WSBEiJ_G0012090.1 mouse_genomes_project 3 144761982 144762620 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007549.1 MGP_WSBEiJ_G0006180.1 mouse_genomes_project 3 116832230 116833809 + Gm9889 lincRNA lincRNA MGP_WSBEiJ_T0007550.1 MGP_WSBEiJ_G0006180.1 mouse_genomes_project 3 116832230 116833808 + Gm9889 lincRNA pseudogene MGP_WSBEiJ_T0097213.1 MGP_WSBEiJ_G0035894.1 mouse_genomes_project 3 109351145 109351559 - Scarna2 scaRNA scaRNA MGP_WSBEiJ_T0100805.1 MGP_WSBEiJ_G0039263.1 mouse_genomes_project 3 123550822 123664619 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0059148.1 MGP_WSBEiJ_G0026351.1 mouse_genomes_project 3 24521321 24552245 + MGP_WSBEiJ_P0059148 Tnfsf10 protein_coding protein_coding MGP_WSBEiJ_T0059149.1 MGP_WSBEiJ_G0026351.1 mouse_genomes_project 3 24521354 24554844 + MGP_WSBEiJ_P0059149 Tnfsf10 protein_coding protein_coding MGP_WSBEiJ_T0059573.1 MGP_WSBEiJ_G0026425.1 mouse_genomes_project 3 38523940 38525884 - MGP_WSBEiJ_P0059573 1700034I23Rik protein_coding protein_coding MGP_WSBEiJ_T0098153.1 MGP_WSBEiJ_G0036816.1 mouse_genomes_project 3 38636322 38636480 + Gm22043 snRNA snRNA MGP_WSBEiJ_T0100761.1 MGP_WSBEiJ_G0039219.1 mouse_genomes_project 3 62568165 63157614 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0062229.1 MGP_WSBEiJ_G0027036.1 mouse_genomes_project 3 114575447 114591157 - protein_coding retained_intron MGP_WSBEiJ_T0062230.1 MGP_WSBEiJ_G0027036.1 mouse_genomes_project 3 114586576 114640099 - MGP_WSBEiJ_P0062230 protein_coding protein_coding MGP_WSBEiJ_T0100082.1 MGP_WSBEiJ_G0038691.1 mouse_genomes_project 3 124258501 124258795 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013578.1 MGP_WSBEiJ_G0011708.1 mouse_genomes_project 3 16865394 16865777 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062586.1 MGP_WSBEiJ_G0027100.1 mouse_genomes_project 3 129330410 129440525 - MGP_WSBEiJ_P0062586 Alpk1 protein_coding protein_coding MGP_WSBEiJ_T0062587.1 MGP_WSBEiJ_G0027100.1 mouse_genomes_project 3 129330410 129396762 - MGP_WSBEiJ_P0062587 Alpk1 protein_coding protein_coding MGP_WSBEiJ_T0062588.1 MGP_WSBEiJ_G0027100.1 mouse_genomes_project 3 129330498 129440525 - Alpk1 protein_coding retained_intron MGP_WSBEiJ_T0062589.1 MGP_WSBEiJ_G0027100.1 mouse_genomes_project 3 129340317 129346914 - MGP_WSBEiJ_P0062589 Alpk1 protein_coding protein_coding MGP_WSBEiJ_T0062590.1 MGP_WSBEiJ_G0027100.1 mouse_genomes_project 3 129391504 129440511 - Alpk1 protein_coding retained_intron MGP_WSBEiJ_T0062591.1 MGP_WSBEiJ_G0027100.1 mouse_genomes_project 3 129422039 129440488 - Alpk1 protein_coding processed_transcript MGP_WSBEiJ_T0062032.1 MGP_WSBEiJ_G0026993.1 mouse_genomes_project 3 108483016 108502463 - MGP_WSBEiJ_P0062032 Csf1 protein_coding protein_coding MGP_WSBEiJ_T0062033.1 MGP_WSBEiJ_G0026993.1 mouse_genomes_project 3 108483016 108502230 - MGP_WSBEiJ_P0062033 Csf1 protein_coding protein_coding MGP_WSBEiJ_T0062034.1 MGP_WSBEiJ_G0026993.1 mouse_genomes_project 3 108484983 108492948 - MGP_WSBEiJ_P0062034 Csf1 protein_coding protein_coding MGP_WSBEiJ_T0062035.1 MGP_WSBEiJ_G0026993.1 mouse_genomes_project 3 108487563 108502236 - MGP_WSBEiJ_P0062035 Csf1 protein_coding protein_coding MGP_WSBEiJ_T0062036.1 MGP_WSBEiJ_G0026993.1 mouse_genomes_project 3 108489701 108502236 - Csf1 protein_coding retained_intron MGP_WSBEiJ_T0062037.1 MGP_WSBEiJ_G0026993.1 mouse_genomes_project 3 108490510 108492710 - MGP_WSBEiJ_P0062037 Csf1 protein_coding protein_coding MGP_WSBEiJ_T0062038.1 MGP_WSBEiJ_G0026993.1 mouse_genomes_project 3 108492348 108502215 - MGP_WSBEiJ_P0062038 Csf1 protein_coding protein_coding MGP_WSBEiJ_T0001215.1 MGP_WSBEiJ_G0001145.1 mouse_genomes_project 3 76584616 76590997 - TEC TEC MGP_WSBEiJ_T0061629.1 MGP_WSBEiJ_G0026899.1 mouse_genomes_project 3 99457996 99538507 + MGP_WSBEiJ_P0061629 Wars2 protein_coding protein_coding MGP_WSBEiJ_T0061630.1 MGP_WSBEiJ_G0026899.1 mouse_genomes_project 3 99458038 99540811 + MGP_WSBEiJ_P0061630 Wars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061631.1 MGP_WSBEiJ_G0026899.1 mouse_genomes_project 3 99458059 99564930 + MGP_WSBEiJ_P0061631 Wars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061632.1 MGP_WSBEiJ_G0026899.1 mouse_genomes_project 3 99458062 99538201 + MGP_WSBEiJ_P0061632 Wars2 protein_coding protein_coding MGP_WSBEiJ_T0061633.1 MGP_WSBEiJ_G0026899.1 mouse_genomes_project 3 99458131 99527375 + Wars2 protein_coding retained_intron MGP_WSBEiJ_T0010344.1 MGP_WSBEiJ_G0008501.1 mouse_genomes_project 3 55819664 55819777 + Mir6377 miRNA miRNA MGP_WSBEiJ_T0059936.1 MGP_WSBEiJ_G0026497.1 mouse_genomes_project 3 59378405 59384591 + MGP_WSBEiJ_P0059936 P2ry1 protein_coding protein_coding MGP_WSBEiJ_T0059937.1 MGP_WSBEiJ_G0026497.1 mouse_genomes_project 3 59378405 59384588 + MGP_WSBEiJ_P0059937 P2ry1 protein_coding protein_coding MGP_WSBEiJ_T0059938.1 MGP_WSBEiJ_G0026497.1 mouse_genomes_project 3 59378409 59380610 + MGP_WSBEiJ_P0059938 P2ry1 protein_coding protein_coding MGP_WSBEiJ_T0013778.1 MGP_WSBEiJ_G0011908.1 mouse_genomes_project 3 86363459 86363988 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007578.1 MGP_WSBEiJ_G0006201.1 mouse_genomes_project 3 130406826 130408835 - 4933424H11Rik lincRNA lincRNA MGP_WSBEiJ_T0013828.1 MGP_WSBEiJ_G0011958.1 mouse_genomes_project 3 101052944 101053235 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061793.1 MGP_WSBEiJ_G0026932.1 mouse_genomes_project 3 104170567 104173682 - MGP_WSBEiJ_P0061793 protein_coding protein_coding MGP_WSBEiJ_T0100786.1 MGP_WSBEiJ_G0039244.1 mouse_genomes_project 3 94080960 94081150 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013692.1 MGP_WSBEiJ_G0011822.1 mouse_genomes_project 3 56633699 56634116 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013851.1 MGP_WSBEiJ_G0011981.1 mouse_genomes_project 3 108524216 108524832 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099418.1 MGP_WSBEiJ_G0038081.1 mouse_genomes_project 3 14291199 14291343 - Gm24963 snoRNA snoRNA MGP_WSBEiJ_T0061637.1 MGP_WSBEiJ_G0026901.1 mouse_genomes_project 3 100241916 100311460 + Spag17 protein_coding processed_transcript MGP_WSBEiJ_T0061638.1 MGP_WSBEiJ_G0026901.1 mouse_genomes_project 3 100241927 100502107 + MGP_WSBEiJ_P0061638 Spag17 protein_coding protein_coding MGP_WSBEiJ_T0061639.1 MGP_WSBEiJ_G0026901.1 mouse_genomes_project 3 100374101 100379836 + Spag17 protein_coding retained_intron MGP_WSBEiJ_T0061640.1 MGP_WSBEiJ_G0026901.1 mouse_genomes_project 3 100379779 100391242 + Spag17 protein_coding retained_intron MGP_WSBEiJ_T0059961.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128224 62290949 - MGP_WSBEiJ_P0059961 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059962.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128224 62290901 - MGP_WSBEiJ_P0059962 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059963.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128227 62134345 - Plch1 protein_coding retained_intron MGP_WSBEiJ_T0059964.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128227 62176590 - Plch1 protein_coding retained_intron MGP_WSBEiJ_T0059965.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128227 62291167 - MGP_WSBEiJ_P0059965 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059966.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128227 62290901 - MGP_WSBEiJ_P0059966 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059967.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128227 62291193 - MGP_WSBEiJ_P0059967 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059968.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128228 62290901 - MGP_WSBEiJ_P0059968 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059969.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62128721 62344128 - MGP_WSBEiJ_P0059969 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059970.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62130923 62134034 - MGP_WSBEiJ_P0059970 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059971.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62133806 62291269 - MGP_WSBEiJ_P0059971 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059972.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62220261 62344098 - MGP_WSBEiJ_P0059972 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0059973.1 MGP_WSBEiJ_G0026504.1 mouse_genomes_project 3 62312456 62344029 - MGP_WSBEiJ_P0059973 Plch1 protein_coding protein_coding MGP_WSBEiJ_T0098154.1 MGP_WSBEiJ_G0036817.1 mouse_genomes_project 3 43608687 43608850 + Gm25796 snRNA snRNA MGP_WSBEiJ_T0098173.1 MGP_WSBEiJ_G0036836.1 mouse_genomes_project 3 78225337 78225441 + Gm24150 snRNA snRNA MGP_WSBEiJ_T0007467.1 MGP_WSBEiJ_G0006117.1 mouse_genomes_project 3 80040470 80050576 + Gm42468 lincRNA lincRNA MGP_WSBEiJ_T0004240.1 MGP_WSBEiJ_G0003719.1 mouse_genomes_project 3 103263203 103265245 - Gm42681 antisense antisense MGP_WSBEiJ_T0013914.1 MGP_WSBEiJ_G0012044.1 mouse_genomes_project 3 131176534 131177576 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061036.1 MGP_WSBEiJ_G0026736.1 mouse_genomes_project 3 92113481 92114737 + MGP_WSBEiJ_P0061036 Sprr2f protein_coding protein_coding MGP_WSBEiJ_T0060929.1 MGP_WSBEiJ_G0026701.1 mouse_genomes_project 3 89811125 89816974 - MGP_WSBEiJ_P0060929 Creb3l4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0004285.1 MGP_WSBEiJ_G0003744.1 mouse_genomes_project 3 125930889 125932586 + Gm42823 antisense antisense MGP_WSBEiJ_T0013906.1 MGP_WSBEiJ_G0012036.1 mouse_genomes_project 3 126108987 126109633 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001204.1 MGP_WSBEiJ_G0001134.1 mouse_genomes_project 3 64678193 64681211 + TEC TEC MGP_WSBEiJ_T0099464.1 MGP_WSBEiJ_G0038127.1 mouse_genomes_project 3 108798051 108798182 + Gm25592 snoRNA snoRNA MGP_WSBEiJ_T0100796.1 MGP_WSBEiJ_G0039254.1 mouse_genomes_project 3 106856941 106858285 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0061895.1 MGP_WSBEiJ_G0026953.1 mouse_genomes_project 3 105619235 105668862 - MGP_WSBEiJ_P0061895 protein_coding unknown_likely_coding MGP_WSBEiJ_T0061896.1 MGP_WSBEiJ_G0026953.1 mouse_genomes_project 3 105620650 105668176 - MGP_WSBEiJ_P0061896 protein_coding protein_coding MGP_WSBEiJ_T0061897.1 MGP_WSBEiJ_G0026953.1 mouse_genomes_project 3 105620680 105668147 - protein_coding retained_intron MGP_WSBEiJ_T0004136.1 MGP_WSBEiJ_G0003645.1 mouse_genomes_project 3 30070698 30073351 + Gm37640 antisense antisense MGP_WSBEiJ_T0007389.1 MGP_WSBEiJ_G0006059.1 mouse_genomes_project 3 34128456 34136659 - Gm11548 lincRNA lincRNA MGP_WSBEiJ_T0013815.1 MGP_WSBEiJ_G0011945.1 mouse_genomes_project 3 96431435 96431887 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004267.1 MGP_WSBEiJ_G0003729.1 mouse_genomes_project 3 109026183 109034262 - 1700010K24Rik antisense antisense MGP_WSBEiJ_T0013576.1 MGP_WSBEiJ_G0011706.1 mouse_genomes_project 3 16663428 16663644 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061605.1 MGP_WSBEiJ_G0026888.1 mouse_genomes_project 3 98490153 98521392 - MGP_WSBEiJ_P0061605 protein_coding protein_coding MGP_WSBEiJ_T0061606.1 MGP_WSBEiJ_G0026888.1 mouse_genomes_project 3 98498861 98515026 - protein_coding retained_intron MGP_WSBEiJ_T0061607.1 MGP_WSBEiJ_G0026888.1 mouse_genomes_project 3 98499397 98508196 - protein_coding retained_intron MGP_WSBEiJ_T0061608.1 MGP_WSBEiJ_G0026888.1 mouse_genomes_project 3 98499504 98518948 - MGP_WSBEiJ_P0061608 protein_coding protein_coding MGP_WSBEiJ_T0096818.1 MGP_WSBEiJ_G0035499.1 mouse_genomes_project 3 88840809 88842079 + pseudogene pseudogene MGP_WSBEiJ_T0001317.1 MGP_WSBEiJ_G0001246.1 mouse_genomes_project 3 132850167 132852697 - TEC TEC MGP_WSBEiJ_T0004300.1 MGP_WSBEiJ_G0003757.1 mouse_genomes_project 3 135685537 135950733 - antisense antisense MGP_WSBEiJ_T0004301.1 MGP_WSBEiJ_G0003757.1 mouse_genomes_project 3 135809879 136097504 - antisense antisense MGP_WSBEiJ_T0004302.1 MGP_WSBEiJ_G0003757.1 mouse_genomes_project 3 136007166 136097651 - antisense antisense MGP_WSBEiJ_T0004139.1 MGP_WSBEiJ_G0003647.1 mouse_genomes_project 3 30514366 30579724 + 4930419G24Rik antisense antisense MGP_WSBEiJ_T0007471.1 MGP_WSBEiJ_G0006121.1 mouse_genomes_project 3 81920395 81939578 - Gm43348 lincRNA lincRNA MGP_WSBEiJ_T0061076.1 MGP_WSBEiJ_G0026771.1 mouse_genomes_project 3 92793504 92794767 - MGP_WSBEiJ_P0061076 Lce1m protein_coding protein_coding MGP_WSBEiJ_T0061077.1 MGP_WSBEiJ_G0026771.1 mouse_genomes_project 3 92794213 92794766 - MGP_WSBEiJ_P0061077 Lce1m protein_coding protein_coding MGP_WSBEiJ_T0001358.1 MGP_WSBEiJ_G0001287.1 mouse_genomes_project 3 160027118 160030299 + TEC TEC MGP_WSBEiJ_T0013739.1 MGP_WSBEiJ_G0011869.1 mouse_genomes_project 3 70601108 70602072 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059008.1 MGP_WSBEiJ_G0026317.1 mouse_genomes_project 3 11585234 11590238 - MGP_WSBEiJ_P0059008 1810022K09Rik protein_coding protein_coding MGP_WSBEiJ_T0059009.1 MGP_WSBEiJ_G0026317.1 mouse_genomes_project 3 11585239 11590174 - MGP_WSBEiJ_P0059009 1810022K09Rik protein_coding protein_coding MGP_WSBEiJ_T0059010.1 MGP_WSBEiJ_G0026317.1 mouse_genomes_project 3 11585239 11590214 - MGP_WSBEiJ_P0059010 1810022K09Rik protein_coding protein_coding MGP_WSBEiJ_T0059011.1 MGP_WSBEiJ_G0026317.1 mouse_genomes_project 3 11585243 11590207 - MGP_WSBEiJ_P0059011 1810022K09Rik protein_coding protein_coding MGP_WSBEiJ_T0059012.1 MGP_WSBEiJ_G0026317.1 mouse_genomes_project 3 11588136 11590196 - 1810022K09Rik protein_coding retained_intron MGP_WSBEiJ_T0059014.1 MGP_WSBEiJ_G0026319.1 mouse_genomes_project 3 11729389 11789226 - MGP_WSBEiJ_P0059014 Car1 protein_coding protein_coding MGP_WSBEiJ_T0061662.1 MGP_WSBEiJ_G0026907.1 mouse_genomes_project 3 101318244 101329219 + MGP_WSBEiJ_P0061662 Trim45 protein_coding protein_coding MGP_WSBEiJ_T0061663.1 MGP_WSBEiJ_G0026907.1 mouse_genomes_project 3 101318517 101331528 + MGP_WSBEiJ_P0061663 Trim45 protein_coding protein_coding MGP_WSBEiJ_T0061664.1 MGP_WSBEiJ_G0026907.1 mouse_genomes_project 3 101318535 101334437 + MGP_WSBEiJ_P0061664 Trim45 protein_coding protein_coding MGP_WSBEiJ_T0061665.1 MGP_WSBEiJ_G0026907.1 mouse_genomes_project 3 101318962 101329574 + MGP_WSBEiJ_P0061665 Trim45 protein_coding protein_coding MGP_WSBEiJ_T0062239.1 MGP_WSBEiJ_G0027038.1 mouse_genomes_project 3 115087578 115298026 + MGP_WSBEiJ_P0062239 Col11a1 protein_coding protein_coding MGP_WSBEiJ_T0062240.1 MGP_WSBEiJ_G0027038.1 mouse_genomes_project 3 115087578 115176275 + MGP_WSBEiJ_P0062240 Col11a1 protein_coding protein_coding MGP_WSBEiJ_T0062241.1 MGP_WSBEiJ_G0027038.1 mouse_genomes_project 3 115087672 115090192 + Col11a1 protein_coding retained_intron MGP_WSBEiJ_T0062242.1 MGP_WSBEiJ_G0027038.1 mouse_genomes_project 3 115125995 115126964 + Col11a1 protein_coding retained_intron MGP_WSBEiJ_T0062243.1 MGP_WSBEiJ_G0027038.1 mouse_genomes_project 3 115217538 115225607 + Col11a1 protein_coding retained_intron MGP_WSBEiJ_T0062244.1 MGP_WSBEiJ_G0027038.1 mouse_genomes_project 3 115237582 115296623 + MGP_WSBEiJ_P0062244 Col11a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099452.1 MGP_WSBEiJ_G0038115.1 mouse_genomes_project 3 88107898 88108033 + Gm25945 snoRNA snoRNA MGP_WSBEiJ_T0004158.1 MGP_WSBEiJ_G0003661.1 mouse_genomes_project 3 50308190 50309191 - Gm20402 antisense antisense MGP_WSBEiJ_T0097344.1 MGP_WSBEiJ_G0036018.1 mouse_genomes_project 3 101838515 101839591 + Gm42938 sense_intronic sense_intronic MGP_WSBEiJ_T0001189.1 MGP_WSBEiJ_G0001119.1 mouse_genomes_project 3 54360433 54364059 - TEC TEC MGP_WSBEiJ_T0060068.1 MGP_WSBEiJ_G0026531.1 mouse_genomes_project 3 67498491 67501069 + MGP_WSBEiJ_P0060068 1110032F04Rik protein_coding protein_coding MGP_WSBEiJ_T0013730.1 MGP_WSBEiJ_G0011860.1 mouse_genomes_project 3 68101455 68102815 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061040.1 MGP_WSBEiJ_G0026739.1 mouse_genomes_project 3 92167742 92169057 + MGP_WSBEiJ_P0061040 Sprr2j-ps protein_coding protein_coding MGP_WSBEiJ_T0013836.1 MGP_WSBEiJ_G0011966.1 mouse_genomes_project 3 103162518 103163839 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007362.1 MGP_WSBEiJ_G0006034.1 mouse_genomes_project 3 17611618 17614738 - Gm31466 lincRNA lincRNA MGP_WSBEiJ_T0062307.1 MGP_WSBEiJ_G0027052.1 mouse_genomes_project 3 117784567 117816116 - MGP_WSBEiJ_P0062307 Mfsd14a protein_coding protein_coding MGP_WSBEiJ_T0062308.1 MGP_WSBEiJ_G0027052.1 mouse_genomes_project 3 117786035 117789923 - Mfsd14a protein_coding retained_intron MGP_WSBEiJ_T0062309.1 MGP_WSBEiJ_G0027052.1 mouse_genomes_project 3 117794783 117799221 - Mfsd14a protein_coding retained_intron MGP_WSBEiJ_T0062311.1 MGP_WSBEiJ_G0027052.1 mouse_genomes_project 3 117801607 117815930 - Mfsd14a protein_coding retained_intron MGP_WSBEiJ_T0062312.1 MGP_WSBEiJ_G0027052.1 mouse_genomes_project 3 117804367 117816049 - Mfsd14a protein_coding retained_intron MGP_WSBEiJ_T0004251.1 MGP_WSBEiJ_G0003726.1 mouse_genomes_project 3 107637723 107807735 - Gm27008 antisense antisense MGP_WSBEiJ_T0004252.1 MGP_WSBEiJ_G0003726.1 mouse_genomes_project 3 107652919 107811615 - Gm27008 antisense antisense MGP_WSBEiJ_T0007385.1 MGP_WSBEiJ_G0006055.1 mouse_genomes_project 3 32309858 32321142 + Gm38509 lincRNA lincRNA MGP_WSBEiJ_T0061869.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105401520 105424087 - MGP_WSBEiJ_P0061869 Mov10 protein_coding protein_coding MGP_WSBEiJ_T0061870.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105401520 105423829 - MGP_WSBEiJ_P0061870 Mov10 protein_coding protein_coding MGP_WSBEiJ_T0061871.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105401520 105424087 - MGP_WSBEiJ_P0061871 Mov10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061872.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105401520 105424087 - MGP_WSBEiJ_P0061872 Mov10 protein_coding protein_coding MGP_WSBEiJ_T0061873.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105401520 105423766 - MGP_WSBEiJ_P0061873 Mov10 protein_coding protein_coding MGP_WSBEiJ_T0061874.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105410578 105422878 - Mov10 protein_coding processed_transcript MGP_WSBEiJ_T0061875.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105410619 105424087 - MGP_WSBEiJ_P0061875 Mov10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061876.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105411436 105423640 - Mov10 protein_coding retained_intron MGP_WSBEiJ_T0061877.1 MGP_WSBEiJ_G0026949.1 mouse_genomes_project 3 105411457 105423825 - Mov10 protein_coding processed_transcript MGP_WSBEiJ_T0061309.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95251373 95258439 + MGP_WSBEiJ_P0061309 Cers2 protein_coding protein_coding MGP_WSBEiJ_T0061310.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95251666 95260158 + MGP_WSBEiJ_P0061310 Cers2 protein_coding protein_coding MGP_WSBEiJ_T0061311.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95251829 95257332 + Cers2 protein_coding retained_intron MGP_WSBEiJ_T0061312.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95251849 95257882 + Cers2 protein_coding retained_intron MGP_WSBEiJ_T0061313.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95253908 95257109 + Cers2 protein_coding retained_intron MGP_WSBEiJ_T0061314.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95254579 95257601 + MGP_WSBEiJ_P0061314 Cers2 protein_coding protein_coding MGP_WSBEiJ_T0061315.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95255350 95258514 + MGP_WSBEiJ_P0061315 Cers2 protein_coding protein_coding MGP_WSBEiJ_T0061316.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95256691 95259231 + Cers2 protein_coding retained_intron MGP_WSBEiJ_T0061317.1 MGP_WSBEiJ_G0026818.1 mouse_genomes_project 3 95257498 95258516 + Cers2 protein_coding retained_intron MGP_WSBEiJ_T0013932.1 MGP_WSBEiJ_G0012062.1 mouse_genomes_project 3 137041056 137041732 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001185.1 MGP_WSBEiJ_G0001115.1 mouse_genomes_project 3 53769889 53772244 + TEC TEC MGP_WSBEiJ_T0059365.1 MGP_WSBEiJ_G0026389.1 mouse_genomes_project 3 31300223 31332418 - MGP_WSBEiJ_P0059365 Ccdc39 protein_coding protein_coding MGP_WSBEiJ_T0059366.1 MGP_WSBEiJ_G0026389.1 mouse_genomes_project 3 31300916 31302413 - Ccdc39 protein_coding retained_intron MGP_WSBEiJ_T0059367.1 MGP_WSBEiJ_G0026389.1 mouse_genomes_project 3 31306508 31332418 - Ccdc39 protein_coding retained_intron MGP_WSBEiJ_T0059368.1 MGP_WSBEiJ_G0026389.1 mouse_genomes_project 3 31308054 31332192 - Ccdc39 protein_coding retained_intron MGP_WSBEiJ_T0059369.1 MGP_WSBEiJ_G0026389.1 mouse_genomes_project 3 31312752 31314704 - Ccdc39 protein_coding retained_intron MGP_WSBEiJ_T0059370.1 MGP_WSBEiJ_G0026389.1 mouse_genomes_project 3 31326114 31332427 - Ccdc39 protein_coding retained_intron MGP_WSBEiJ_T0063107.1 MGP_WSBEiJ_G0027204.1 mouse_genomes_project 3 148947604 148985671 + MGP_WSBEiJ_P0063107 Ssx2ip protein_coding protein_coding MGP_WSBEiJ_T0063108.1 MGP_WSBEiJ_G0027204.1 mouse_genomes_project 3 148947604 148985309 + MGP_WSBEiJ_P0063108 Ssx2ip protein_coding protein_coding MGP_WSBEiJ_T0063109.1 MGP_WSBEiJ_G0027204.1 mouse_genomes_project 3 148947626 148985660 + MGP_WSBEiJ_P0063109 Ssx2ip protein_coding protein_coding MGP_WSBEiJ_T0063110.1 MGP_WSBEiJ_G0027204.1 mouse_genomes_project 3 148947648 148984433 + MGP_WSBEiJ_P0063110 Ssx2ip protein_coding protein_coding MGP_WSBEiJ_T0063111.1 MGP_WSBEiJ_G0027204.1 mouse_genomes_project 3 148947653 148961936 + MGP_WSBEiJ_P0063111 Ssx2ip protein_coding protein_coding MGP_WSBEiJ_T0063112.1 MGP_WSBEiJ_G0027204.1 mouse_genomes_project 3 148947940 148962896 + MGP_WSBEiJ_P0063112 Ssx2ip protein_coding protein_coding MGP_WSBEiJ_T0063113.1 MGP_WSBEiJ_G0027204.1 mouse_genomes_project 3 148975516 148978174 + Ssx2ip protein_coding retained_intron MGP_WSBEiJ_T0059811.1 MGP_WSBEiJ_G0026466.1 mouse_genomes_project 3 53651879 53662992 - MGP_WSBEiJ_P0059811 Gm21954 protein_coding protein_coding MGP_WSBEiJ_T0004152.1 MGP_WSBEiJ_G0003655.1 mouse_genomes_project 3 36562683 36576917 - C230034O21Rik antisense antisense MGP_WSBEiJ_T0059913.1 MGP_WSBEiJ_G0026495.1 mouse_genomes_project 3 58400616 58406254 + MGP_WSBEiJ_P0059913 Sucnr1 protein_coding protein_coding MGP_WSBEiJ_T0059914.1 MGP_WSBEiJ_G0026495.1 mouse_genomes_project 3 58400649 58405013 + Sucnr1 protein_coding processed_transcript MGP_WSBEiJ_T0060120.1 MGP_WSBEiJ_G0026543.1 mouse_genomes_project 3 71825165 71835711 - MGP_WSBEiJ_P0060120 Slitrk3 protein_coding protein_coding MGP_WSBEiJ_T0060121.1 MGP_WSBEiJ_G0026543.1 mouse_genomes_project 3 71826013 71836482 - MGP_WSBEiJ_P0060121 Slitrk3 protein_coding protein_coding MGP_WSBEiJ_T0098180.1 MGP_WSBEiJ_G0036843.1 mouse_genomes_project 3 85660968 85661075 + Gm25039 snRNA snRNA MGP_WSBEiJ_T0058960.1 MGP_WSBEiJ_G0026301.1 mouse_genomes_project 3 6857426 6861471 + MGP_WSBEiJ_P0058960 Fabp5 protein_coding protein_coding MGP_WSBEiJ_T0058961.1 MGP_WSBEiJ_G0026301.1 mouse_genomes_project 3 6857483 6861199 + Fabp5 protein_coding retained_intron MGP_WSBEiJ_T0010370.1 MGP_WSBEiJ_G0008527.1 mouse_genomes_project 3 109364115 109364189 - Gm22860 miRNA miRNA MGP_WSBEiJ_T0060731.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88692680 88705190 + MGP_WSBEiJ_P0060731 Thbs3 protein_coding protein_coding MGP_WSBEiJ_T0060732.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88692705 88696599 + MGP_WSBEiJ_P0060732 Thbs3 protein_coding protein_coding MGP_WSBEiJ_T0060733.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88692727 88705190 + Thbs3 protein_coding retained_intron MGP_WSBEiJ_T0060734.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88692733 88705157 + MGP_WSBEiJ_P0060734 Thbs3 protein_coding protein_coding MGP_WSBEiJ_T0060735.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88695933 88697600 + Thbs3 protein_coding retained_intron MGP_WSBEiJ_T0060736.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88699461 88701525 + Thbs3 protein_coding processed_transcript MGP_WSBEiJ_T0060738.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88702488 88703910 + Thbs3 protein_coding retained_intron MGP_WSBEiJ_T0060739.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88702637 88705056 + MGP_WSBEiJ_P0060739 Thbs3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060740.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88702678 88703778 + Thbs3 protein_coding retained_intron MGP_WSBEiJ_T0060741.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88703529 88704916 + Thbs3 protein_coding retained_intron MGP_WSBEiJ_T0060742.1 MGP_WSBEiJ_G0026666.1 mouse_genomes_project 3 88704602 88705139 + Thbs3 protein_coding retained_intron MGP_WSBEiJ_T0058964.1 MGP_WSBEiJ_G0026304.1 mouse_genomes_project 3 7110727 7114338 - MGP_WSBEiJ_P0058964 protein_coding protein_coding MGP_WSBEiJ_T0058965.1 MGP_WSBEiJ_G0026304.1 mouse_genomes_project 3 7110729 7114399 - MGP_WSBEiJ_P0058965 protein_coding protein_coding MGP_WSBEiJ_T0058966.1 MGP_WSBEiJ_G0026304.1 mouse_genomes_project 3 7110732 7114338 - MGP_WSBEiJ_P0058966 protein_coding protein_coding MGP_WSBEiJ_T0061419.1 MGP_WSBEiJ_G0026835.1 mouse_genomes_project 3 95870511 95877682 + MGP_WSBEiJ_P0061419 Aph1a protein_coding protein_coding MGP_WSBEiJ_T0061420.1 MGP_WSBEiJ_G0026835.1 mouse_genomes_project 3 95870575 95871534 + MGP_WSBEiJ_P0061420 Aph1a protein_coding protein_coding MGP_WSBEiJ_T0097369.1 MGP_WSBEiJ_G0036043.1 mouse_genomes_project 3 105096605 105097820 - 4930509H03Rik sense_intronic sense_intronic MGP_WSBEiJ_T0007543.1 MGP_WSBEiJ_G0006174.1 mouse_genomes_project 3 108780013 108787922 - Gm12498 lincRNA lincRNA MGP_WSBEiJ_T0010341.1 MGP_WSBEiJ_G0008498.1 mouse_genomes_project 3 38231353 38231427 + Gm23810 miRNA miRNA MGP_WSBEiJ_T0013737.1 MGP_WSBEiJ_G0011867.1 mouse_genomes_project 3 70174819 70175260 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059727.1 MGP_WSBEiJ_G0026452.1 mouse_genomes_project 3 52275884 52301212 + Trpc4 protein_coding processed_transcript MGP_WSBEiJ_T0059728.1 MGP_WSBEiJ_G0026452.1 mouse_genomes_project 3 52275906 52454494 + MGP_WSBEiJ_P0059728 Trpc4 protein_coding protein_coding MGP_WSBEiJ_T0059729.1 MGP_WSBEiJ_G0026452.1 mouse_genomes_project 3 52275915 52396157 + Trpc4 protein_coding retained_intron MGP_WSBEiJ_T0059730.1 MGP_WSBEiJ_G0026452.1 mouse_genomes_project 3 52275953 52454490 + MGP_WSBEiJ_P0059730 Trpc4 protein_coding protein_coding MGP_WSBEiJ_T0059731.1 MGP_WSBEiJ_G0026452.1 mouse_genomes_project 3 52276222 52351912 + Trpc4 protein_coding retained_intron MGP_WSBEiJ_T0059732.1 MGP_WSBEiJ_G0026452.1 mouse_genomes_project 3 52276464 52454438 + MGP_WSBEiJ_P0059732 Trpc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061616.1 MGP_WSBEiJ_G0026894.1 mouse_genomes_project 3 98995317 99009980 - MGP_WSBEiJ_P0061616 protein_coding protein_coding MGP_WSBEiJ_T0061622.1 MGP_WSBEiJ_G0026894.1 mouse_genomes_project 3 98995716 99002078 - MGP_WSBEiJ_P0061622 protein_coding protein_coding MGP_WSBEiJ_T0013924.1 MGP_WSBEiJ_G0012054.1 mouse_genomes_project 3 135429319 135429594 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062617.1 MGP_WSBEiJ_G0027105.1 mouse_genomes_project 3 130999407 131066706 - MGP_WSBEiJ_P0062617 Enpep protein_coding protein_coding MGP_WSBEiJ_T0062618.1 MGP_WSBEiJ_G0027105.1 mouse_genomes_project 3 131000509 131066250 - MGP_WSBEiJ_P0062618 Enpep protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062619.1 MGP_WSBEiJ_G0027105.1 mouse_genomes_project 3 131007284 131012371 - Enpep protein_coding retained_intron MGP_WSBEiJ_T0062620.1 MGP_WSBEiJ_G0027105.1 mouse_genomes_project 3 131007455 131041708 - MGP_WSBEiJ_P0062620 Enpep protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062621.1 MGP_WSBEiJ_G0027105.1 mouse_genomes_project 3 131031295 131066706 - Enpep protein_coding retained_intron MGP_WSBEiJ_T0007651.1 MGP_WSBEiJ_G0006262.1 mouse_genomes_project 3 153358064 153365278 + Gm43470 lincRNA lincRNA MGP_WSBEiJ_T0007652.1 MGP_WSBEiJ_G0006262.1 mouse_genomes_project 3 153358143 153383182 + Gm43470 lincRNA lincRNA MGP_WSBEiJ_T0061628.1 MGP_WSBEiJ_G0026898.1 mouse_genomes_project 3 99191994 99212842 - MGP_WSBEiJ_P0061628 Hao2 protein_coding protein_coding MGP_WSBEiJ_T0062938.1 MGP_WSBEiJ_G0027168.1 mouse_genomes_project 3 140832158 141004998 + MGP_WSBEiJ_P0062938 Tspan5 protein_coding protein_coding MGP_WSBEiJ_T0062939.1 MGP_WSBEiJ_G0027168.1 mouse_genomes_project 3 140832268 141001519 + MGP_WSBEiJ_P0062939 Tspan5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062940.1 MGP_WSBEiJ_G0027168.1 mouse_genomes_project 3 140832468 140992033 + MGP_WSBEiJ_P0062940 Tspan5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062941.1 MGP_WSBEiJ_G0027168.1 mouse_genomes_project 3 140832732 140989656 + MGP_WSBEiJ_P0062941 Tspan5 protein_coding protein_coding MGP_WSBEiJ_T0062942.1 MGP_WSBEiJ_G0027168.1 mouse_genomes_project 3 140867598 140999587 + MGP_WSBEiJ_P0062942 Tspan5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062943.1 MGP_WSBEiJ_G0027168.1 mouse_genomes_project 3 140932634 141001510 + MGP_WSBEiJ_P0062943 Tspan5 protein_coding protein_coding MGP_WSBEiJ_T0013617.1 MGP_WSBEiJ_G0011747.1 mouse_genomes_project 3 34170322 34171020 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013704.1 MGP_WSBEiJ_G0011834.1 mouse_genomes_project 3 59235451 59235830 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099455.1 MGP_WSBEiJ_G0038118.1 mouse_genomes_project 3 89684870 89685002 + Gm23723 snoRNA snoRNA MGP_WSBEiJ_T0004127.1 MGP_WSBEiJ_G0003639.1 mouse_genomes_project 3 26102346 26113043 - Gm33051 antisense antisense MGP_WSBEiJ_T0062654.1 MGP_WSBEiJ_G0027112.1 mouse_genomes_project 3 131652774 131670419 + MGP_WSBEiJ_P0062654 Pla2g12a protein_coding protein_coding MGP_WSBEiJ_T0062655.1 MGP_WSBEiJ_G0027112.1 mouse_genomes_project 3 131652982 131669526 + MGP_WSBEiJ_P0062655 Pla2g12a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062656.1 MGP_WSBEiJ_G0027112.1 mouse_genomes_project 3 131655369 131669544 + MGP_WSBEiJ_P0062656 Pla2g12a protein_coding protein_coding MGP_WSBEiJ_T0062657.1 MGP_WSBEiJ_G0027112.1 mouse_genomes_project 3 131666979 131670415 + Pla2g12a protein_coding retained_intron MGP_WSBEiJ_T0013679.1 MGP_WSBEiJ_G0011809.1 mouse_genomes_project 3 51746505 51746972 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013659.1 MGP_WSBEiJ_G0011789.1 mouse_genomes_project 3 47620409 47620667 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097376.1 MGP_WSBEiJ_G0036050.1 mouse_genomes_project 3 106364180 106365613 - Gm43328 sense_intronic sense_intronic MGP_WSBEiJ_T0100756.1 MGP_WSBEiJ_G0039214.1 mouse_genomes_project 3 57696163 57696398 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013843.1 MGP_WSBEiJ_G0011973.1 mouse_genomes_project 3 104446872 104447337 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059492.1 MGP_WSBEiJ_G0026410.1 mouse_genomes_project 3 34975796 34980367 - MGP_WSBEiJ_P0059492 Cetn4 protein_coding protein_coding MGP_WSBEiJ_T0059493.1 MGP_WSBEiJ_G0026410.1 mouse_genomes_project 3 34976660 34980367 - MGP_WSBEiJ_P0059493 Cetn4 protein_coding protein_coding MGP_WSBEiJ_T0059494.1 MGP_WSBEiJ_G0026410.1 mouse_genomes_project 3 34976662 34980367 - MGP_WSBEiJ_P0059494 Cetn4 protein_coding protein_coding MGP_WSBEiJ_T0059495.1 MGP_WSBEiJ_G0026410.1 mouse_genomes_project 3 34976797 34980341 - MGP_WSBEiJ_P0059495 Cetn4 protein_coding protein_coding MGP_WSBEiJ_T0059496.1 MGP_WSBEiJ_G0026410.1 mouse_genomes_project 3 34977387 34980629 - MGP_WSBEiJ_P0059496 Cetn4 protein_coding protein_coding MGP_WSBEiJ_T0063080.1 MGP_WSBEiJ_G0027195.1 mouse_genomes_project 3 148137063 148140068 - MGP_WSBEiJ_P0063080 Cyr61 protein_coding protein_coding MGP_WSBEiJ_T0059895.1 MGP_WSBEiJ_G0026487.1 mouse_genomes_project 3 57485945 57488936 - MGP_WSBEiJ_P0059895 P2ry13 protein_coding protein_coding MGP_WSBEiJ_T0007371.1 MGP_WSBEiJ_G0006043.1 mouse_genomes_project 3 27112767 27247066 - Gm33206 lincRNA lincRNA MGP_WSBEiJ_T0013969.1 MGP_WSBEiJ_G0012099.1 mouse_genomes_project 3 149122596 149122988 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098193.1 MGP_WSBEiJ_G0036856.1 mouse_genomes_project 3 95019833 95019940 + Gm22301 snRNA snRNA MGP_WSBEiJ_T0098164.1 MGP_WSBEiJ_G0036827.1 mouse_genomes_project 3 57239198 57239370 - Gm25572 snRNA snRNA MGP_WSBEiJ_T0013559.1 MGP_WSBEiJ_G0011689.1 mouse_genomes_project 3 11485276 11486284 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061291.1 MGP_WSBEiJ_G0026815.1 mouse_genomes_project 3 95185395 95217791 - MGP_WSBEiJ_P0061291 Prune protein_coding protein_coding MGP_WSBEiJ_T0061292.1 MGP_WSBEiJ_G0026815.1 mouse_genomes_project 3 95198438 95202225 - Prune protein_coding retained_intron MGP_WSBEiJ_T0063356.1 MGP_WSBEiJ_G0027240.1 mouse_genomes_project 3 157738420 158007085 - MGP_WSBEiJ_P0063356 Tnni3k protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063357.1 MGP_WSBEiJ_G0027240.1 mouse_genomes_project 3 157738428 158007085 - MGP_WSBEiJ_P0063357 Tnni3k protein_coding protein_coding MGP_WSBEiJ_T0063358.1 MGP_WSBEiJ_G0027240.1 mouse_genomes_project 3 157983657 158007028 - Tnni3k protein_coding retained_intron MGP_WSBEiJ_T0001141.1 MGP_WSBEiJ_G0001073.1 mouse_genomes_project 3 45190271 45192994 - TEC TEC MGP_WSBEiJ_T0059263.1 MGP_WSBEiJ_G0026372.1 mouse_genomes_project 3 28406188 28465535 + MGP_WSBEiJ_P0059263 Prkci protein_coding protein_coding MGP_WSBEiJ_T0059264.1 MGP_WSBEiJ_G0026372.1 mouse_genomes_project 3 28415643 28444814 + MGP_WSBEiJ_P0059264 Prkci protein_coding protein_coding MGP_WSBEiJ_T0059265.1 MGP_WSBEiJ_G0026372.1 mouse_genomes_project 3 28442021 28452047 + Prkci protein_coding processed_transcript MGP_WSBEiJ_T0059266.1 MGP_WSBEiJ_G0026372.1 mouse_genomes_project 3 28451103 28453871 + MGP_WSBEiJ_P0059266 Prkci protein_coding protein_coding MGP_WSBEiJ_T0059267.1 MGP_WSBEiJ_G0026372.1 mouse_genomes_project 3 28451168 28452620 + Prkci protein_coding retained_intron MGP_WSBEiJ_T0099416.1 MGP_WSBEiJ_G0038079.1 mouse_genomes_project 3 7908485 7908603 - Gm22795 snoRNA snoRNA MGP_WSBEiJ_T0004270.1 MGP_WSBEiJ_G0003732.1 mouse_genomes_project 3 109825056 109827133 + Gm43221 antisense antisense MGP_WSBEiJ_T0100755.1 MGP_WSBEiJ_G0039213.1 mouse_genomes_project 3 20131707 20134219 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0059776.1 MGP_WSBEiJ_G0026461.1 mouse_genomes_project 3 53219191 53224330 - MGP_WSBEiJ_P0059776 Ccna1 protein_coding protein_coding MGP_WSBEiJ_T0059777.1 MGP_WSBEiJ_G0026461.1 mouse_genomes_project 3 53219197 53228713 - MGP_WSBEiJ_P0059777 Ccna1 protein_coding protein_coding MGP_WSBEiJ_T0059778.1 MGP_WSBEiJ_G0026461.1 mouse_genomes_project 3 53219199 53228700 - MGP_WSBEiJ_P0059778 Ccna1 protein_coding protein_coding MGP_WSBEiJ_T0059779.1 MGP_WSBEiJ_G0026461.1 mouse_genomes_project 3 53219200 53229159 - MGP_WSBEiJ_P0059779 Ccna1 protein_coding protein_coding MGP_WSBEiJ_T0059780.1 MGP_WSBEiJ_G0026461.1 mouse_genomes_project 3 53224277 53229140 - MGP_WSBEiJ_P0059780 Ccna1 protein_coding protein_coding MGP_WSBEiJ_T0059781.1 MGP_WSBEiJ_G0026461.1 mouse_genomes_project 3 53224671 53228695 - MGP_WSBEiJ_P0059781 Ccna1 protein_coding protein_coding MGP_WSBEiJ_T0062269.1 MGP_WSBEiJ_G0027045.1 mouse_genomes_project 3 117382853 117386713 - MGP_WSBEiJ_P0062269 Gpr88 protein_coding protein_coding MGP_WSBEiJ_T0062270.1 MGP_WSBEiJ_G0027045.1 mouse_genomes_project 3 117385762 117386287 - MGP_WSBEiJ_P0062270 Gpr88 protein_coding protein_coding MGP_WSBEiJ_T0062271.1 MGP_WSBEiJ_G0027045.1 mouse_genomes_project 3 117385875 117386673 - Gpr88 protein_coding processed_transcript MGP_WSBEiJ_T0061088.1 MGP_WSBEiJ_G0026777.1 mouse_genomes_project 3 93225957 93233808 + MGP_WSBEiJ_P0061088 Tchh protein_coding protein_coding MGP_WSBEiJ_T0097501.1 MGP_WSBEiJ_G0036165.1 mouse_genomes_project 3 63507518 63774375 + sense_overlapping sense_overlapping MGP_WSBEiJ_T0098224.1 MGP_WSBEiJ_G0036887.1 mouse_genomes_project 3 148928445 148928548 - Gm22078 snRNA snRNA MGP_WSBEiJ_T0013763.1 MGP_WSBEiJ_G0011893.1 mouse_genomes_project 3 79145495 79146569 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007455.1 MGP_WSBEiJ_G0006108.1 mouse_genomes_project 3 72160966 72289398 - lincRNA lincRNA MGP_WSBEiJ_T0059276.1 MGP_WSBEiJ_G0026375.1 mouse_genomes_project 3 28624798 28736165 - MGP_WSBEiJ_P0059276 Slc7a14 protein_coding protein_coding MGP_WSBEiJ_T0059277.1 MGP_WSBEiJ_G0026375.1 mouse_genomes_project 3 28647744 28684194 - MGP_WSBEiJ_P0059277 Slc7a14 protein_coding protein_coding MGP_WSBEiJ_T0063278.1 MGP_WSBEiJ_G0027227.1 mouse_genomes_project 3 155318767 155524420 - MGP_WSBEiJ_P0063278 Ak5 protein_coding protein_coding MGP_WSBEiJ_T0063279.1 MGP_WSBEiJ_G0027227.1 mouse_genomes_project 3 155319815 155382146 - MGP_WSBEiJ_P0063279 Ak5 protein_coding protein_coding MGP_WSBEiJ_T0063280.1 MGP_WSBEiJ_G0027227.1 mouse_genomes_project 3 155328664 155334436 - Ak5 protein_coding retained_intron MGP_WSBEiJ_T0059288.1 MGP_WSBEiJ_G0026378.1 mouse_genomes_project 3 29841833 29910133 + MGP_WSBEiJ_P0059288 Pik3ca protein_coding protein_coding MGP_WSBEiJ_T0059289.1 MGP_WSBEiJ_G0026378.1 mouse_genomes_project 3 29880315 29912483 + MGP_WSBEiJ_P0059289 Pik3ca protein_coding protein_coding MGP_WSBEiJ_T0059290.1 MGP_WSBEiJ_G0026378.1 mouse_genomes_project 3 29880540 29910133 + MGP_WSBEiJ_P0059290 Pik3ca protein_coding protein_coding MGP_WSBEiJ_T0059291.1 MGP_WSBEiJ_G0026378.1 mouse_genomes_project 3 29905702 29906854 + Pik3ca protein_coding retained_intron MGP_WSBEiJ_T0013787.1 MGP_WSBEiJ_G0011917.1 mouse_genomes_project 3 90345509 90346412 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013668.1 MGP_WSBEiJ_G0011798.1 mouse_genomes_project 3 48045479 48045801 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060472.1 MGP_WSBEiJ_G0026626.1 mouse_genomes_project 3 87501151 87531265 + MGP_WSBEiJ_P0060472 Mef2d protein_coding protein_coding MGP_WSBEiJ_T0060473.1 MGP_WSBEiJ_G0026626.1 mouse_genomes_project 3 87501195 87529111 + MGP_WSBEiJ_P0060473 Mef2d protein_coding protein_coding MGP_WSBEiJ_T0060474.1 MGP_WSBEiJ_G0026626.1 mouse_genomes_project 3 87501351 87527836 + MGP_WSBEiJ_P0060474 Mef2d protein_coding protein_coding MGP_WSBEiJ_T0060475.1 MGP_WSBEiJ_G0026626.1 mouse_genomes_project 3 87501351 87527836 + MGP_WSBEiJ_P0060475 Mef2d protein_coding protein_coding MGP_WSBEiJ_T0060476.1 MGP_WSBEiJ_G0026626.1 mouse_genomes_project 3 87501353 87515191 + Mef2d protein_coding retained_intron MGP_WSBEiJ_T0060477.1 MGP_WSBEiJ_G0026626.1 mouse_genomes_project 3 87501568 87531201 + MGP_WSBEiJ_P0060477 Mef2d protein_coding unknown_likely_coding MGP_WSBEiJ_T0060478.1 MGP_WSBEiJ_G0026626.1 mouse_genomes_project 3 87522141 87527966 + Mef2d protein_coding processed_transcript MGP_WSBEiJ_T0060479.1 MGP_WSBEiJ_G0026626.1 mouse_genomes_project 3 87527432 87528087 + Mef2d protein_coding processed_transcript MGP_WSBEiJ_T0013658.1 MGP_WSBEiJ_G0011788.1 mouse_genomes_project 3 47619758 47620074 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004265.1 MGP_WSBEiJ_G0003728.1 mouse_genomes_project 3 108853204 108855632 + Gm12500 antisense antisense MGP_WSBEiJ_T0004266.1 MGP_WSBEiJ_G0003728.1 mouse_genomes_project 3 108853596 108855630 + Gm12500 antisense antisense MGP_WSBEiJ_T0059870.1 MGP_WSBEiJ_G0026480.1 mouse_genomes_project 3 56860046 56894181 - MGP_WSBEiJ_P0059870 Erich6 protein_coding protein_coding MGP_WSBEiJ_T0059871.1 MGP_WSBEiJ_G0026480.1 mouse_genomes_project 3 56860056 56886479 - MGP_WSBEiJ_P0059871 Erich6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060105.1 MGP_WSBEiJ_G0026539.1 mouse_genomes_project 3 68386407 68388884 + Nmd3 protein_coding retained_intron MGP_WSBEiJ_T0060106.1 MGP_WSBEiJ_G0026539.1 mouse_genomes_project 3 68386407 68424233 + MGP_WSBEiJ_P0060106 Nmd3 protein_coding protein_coding MGP_WSBEiJ_T0060107.1 MGP_WSBEiJ_G0026539.1 mouse_genomes_project 3 68386454 68399475 + MGP_WSBEiJ_P0060107 Nmd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060108.1 MGP_WSBEiJ_G0026539.1 mouse_genomes_project 3 68386505 68394957 + MGP_WSBEiJ_P0060108 Nmd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060109.1 MGP_WSBEiJ_G0026539.1 mouse_genomes_project 3 68386512 68396398 + Nmd3 protein_coding retained_intron MGP_WSBEiJ_T0060110.1 MGP_WSBEiJ_G0026539.1 mouse_genomes_project 3 68386677 68390832 + MGP_WSBEiJ_P0060110 Nmd3 protein_coding protein_coding MGP_WSBEiJ_T0060111.1 MGP_WSBEiJ_G0026539.1 mouse_genomes_project 3 68388658 68405607 + Nmd3 protein_coding retained_intron MGP_WSBEiJ_T0060112.1 MGP_WSBEiJ_G0026539.1 mouse_genomes_project 3 68412556 68415159 + Nmd3 protein_coding retained_intron MGP_WSBEiJ_T0060878.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89548771 89601518 - MGP_WSBEiJ_P0060878 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060879.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89548771 89601528 - MGP_WSBEiJ_P0060879 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060880.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89548919 89601538 - MGP_WSBEiJ_P0060880 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060881.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89548924 89601525 - MGP_WSBEiJ_P0060881 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060882.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89549446 89551923 - MGP_WSBEiJ_P0060882 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060883.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89551032 89552420 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060884.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89554627 89601515 - MGP_WSBEiJ_P0060884 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060885.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89554852 89569911 - MGP_WSBEiJ_P0060885 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060886.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89554853 89601578 - MGP_WSBEiJ_P0060886 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060887.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89554853 89601535 - MGP_WSBEiJ_P0060887 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060888.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89562827 89564917 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060889.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89563000 89569208 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060890.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89563643 89601394 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060891.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89564764 89566248 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060892.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89565175 89567115 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060893.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89568864 89576054 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060894.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89570652 89572041 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060895.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89585273 89587669 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060896.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89587792 89601145 - MGP_WSBEiJ_P0060896 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060897.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89590609 89601565 - Ubap2l protein_coding retained_intron MGP_WSBEiJ_T0060898.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89592549 89601691 - MGP_WSBEiJ_P0060898 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060899.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89592619 89601501 - MGP_WSBEiJ_P0060899 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060900.1 MGP_WSBEiJ_G0026694.1 mouse_genomes_project 3 89593683 89597362 - MGP_WSBEiJ_P0060900 Ubap2l protein_coding protein_coding MGP_WSBEiJ_T0060208.1 MGP_WSBEiJ_G0026562.1 mouse_genomes_project 3 79921634 79996030 - MGP_WSBEiJ_P0060208 Glrb protein_coding protein_coding MGP_WSBEiJ_T0060209.1 MGP_WSBEiJ_G0026562.1 mouse_genomes_project 3 79921634 79995988 - MGP_WSBEiJ_P0060209 Glrb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060210.1 MGP_WSBEiJ_G0026562.1 mouse_genomes_project 3 79922995 79994466 - MGP_WSBEiJ_P0060210 Glrb protein_coding protein_coding MGP_WSBEiJ_T0060211.1 MGP_WSBEiJ_G0026562.1 mouse_genomes_project 3 79934516 79995907 - MGP_WSBEiJ_P0060211 Glrb protein_coding protein_coding MGP_WSBEiJ_T0060212.1 MGP_WSBEiJ_G0026562.1 mouse_genomes_project 3 79934523 79936139 - Glrb protein_coding retained_intron MGP_WSBEiJ_T0060213.1 MGP_WSBEiJ_G0026562.1 mouse_genomes_project 3 79941860 79995968 - MGP_WSBEiJ_P0060213 Glrb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100753.1 MGP_WSBEiJ_G0039211.1 mouse_genomes_project 3 11328949 11345365 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007327.1 MGP_WSBEiJ_G0006014.1 mouse_genomes_project 3 1543269 1544536 + 1110015O18Rik lincRNA lincRNA MGP_WSBEiJ_T0007328.1 MGP_WSBEiJ_G0006014.1 mouse_genomes_project 3 1544422 1563992 + 1110015O18Rik lincRNA lincRNA MGP_WSBEiJ_T0007329.1 MGP_WSBEiJ_G0006014.1 mouse_genomes_project 3 1545207 1563058 + 1110015O18Rik lincRNA lincRNA MGP_WSBEiJ_T0001339.1 MGP_WSBEiJ_G0001268.1 mouse_genomes_project 3 151206980 151207520 + TEC TEC MGP_WSBEiJ_T0062609.1 MGP_WSBEiJ_G0027104.1 mouse_genomes_project 3 130928232 130947924 + MGP_WSBEiJ_P0062609 Pitx2 protein_coding protein_coding MGP_WSBEiJ_T0062610.1 MGP_WSBEiJ_G0027104.1 mouse_genomes_project 3 130928276 130947912 + MGP_WSBEiJ_P0062610 Pitx2 protein_coding protein_coding MGP_WSBEiJ_T0062611.1 MGP_WSBEiJ_G0027104.1 mouse_genomes_project 3 130928280 130947925 + MGP_WSBEiJ_P0062611 Pitx2 protein_coding protein_coding MGP_WSBEiJ_T0062612.1 MGP_WSBEiJ_G0027104.1 mouse_genomes_project 3 130928323 130932938 + MGP_WSBEiJ_P0062612 Pitx2 protein_coding protein_coding MGP_WSBEiJ_T0062613.1 MGP_WSBEiJ_G0027104.1 mouse_genomes_project 3 130932307 130947231 + MGP_WSBEiJ_P0062613 Pitx2 protein_coding protein_coding MGP_WSBEiJ_T0062614.1 MGP_WSBEiJ_G0027104.1 mouse_genomes_project 3 130942249 130945092 + Pitx2 protein_coding retained_intron MGP_WSBEiJ_T0062615.1 MGP_WSBEiJ_G0027104.1 mouse_genomes_project 3 130942289 130947922 + MGP_WSBEiJ_P0062615 Pitx2 protein_coding protein_coding MGP_WSBEiJ_T0062616.1 MGP_WSBEiJ_G0027104.1 mouse_genomes_project 3 130942592 130944942 + MGP_WSBEiJ_P0062616 Pitx2 protein_coding protein_coding MGP_WSBEiJ_T0060641.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88374002 88402890 - MGP_WSBEiJ_P0060641 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060642.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88376842 88378751 - Dap3 protein_coding retained_intron MGP_WSBEiJ_T0060643.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88376842 88402971 - MGP_WSBEiJ_P0060643 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060644.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88376969 88384196 - MGP_WSBEiJ_P0060644 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060645.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88377005 88384229 - MGP_WSBEiJ_P0060645 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060646.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88381684 88403318 - MGP_WSBEiJ_P0060646 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060647.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88381718 88405630 - MGP_WSBEiJ_P0060647 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060648.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88382653 88403291 - MGP_WSBEiJ_P0060648 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060649.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88382701 88402926 - MGP_WSBEiJ_P0060649 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060650.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88386624 88391543 - MGP_WSBEiJ_P0060650 Dap3 protein_coding protein_coding MGP_WSBEiJ_T0060651.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88402072 88405559 - Dap3 protein_coding processed_transcript MGP_WSBEiJ_T0060652.1 MGP_WSBEiJ_G0026654.1 mouse_genomes_project 3 88405165 88405631 - Dap3 protein_coding processed_transcript MGP_WSBEiJ_T0013567.1 MGP_WSBEiJ_G0011697.1 mouse_genomes_project 3 14263482 14263816 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001175.1 MGP_WSBEiJ_G0001105.1 mouse_genomes_project 3 51142282 51145375 - TEC TEC MGP_WSBEiJ_T0098229.1 MGP_WSBEiJ_G0036892.1 mouse_genomes_project 3 160398627 160398734 + Gm22458 snRNA snRNA MGP_WSBEiJ_T0060869.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89542805 89547212 - MGP_WSBEiJ_P0060869 Hax1 protein_coding protein_coding MGP_WSBEiJ_T0060870.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89542809 89547298 - MGP_WSBEiJ_P0060870 Hax1 protein_coding protein_coding MGP_WSBEiJ_T0060871.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89542812 89543269 - Hax1 protein_coding retained_intron MGP_WSBEiJ_T0060872.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89542812 89547309 - MGP_WSBEiJ_P0060872 Hax1 protein_coding protein_coding MGP_WSBEiJ_T0060873.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89542813 89547318 - Hax1 protein_coding retained_intron MGP_WSBEiJ_T0060874.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89543065 89543587 - Hax1 protein_coding retained_intron MGP_WSBEiJ_T0060875.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89543250 89547312 - MGP_WSBEiJ_P0060875 Hax1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060876.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89546151 89547412 - Hax1 protein_coding retained_intron MGP_WSBEiJ_T0060877.1 MGP_WSBEiJ_G0026693.1 mouse_genomes_project 3 89546401 89546994 - MGP_WSBEiJ_P0060877 Hax1 protein_coding protein_coding MGP_WSBEiJ_T0013565.1 MGP_WSBEiJ_G0011695.1 mouse_genomes_project 3 12921950 12923011 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062201.1 MGP_WSBEiJ_G0027029.1 mouse_genomes_project 3 109793259 109854453 - MGP_WSBEiJ_P0062201 Fam102b protein_coding protein_coding MGP_WSBEiJ_T0001150.1 MGP_WSBEiJ_G0001082.1 mouse_genomes_project 3 48946302 48947595 - TEC TEC MGP_WSBEiJ_T0098209.1 MGP_WSBEiJ_G0036872.1 mouse_genomes_project 3 117601293 117601469 - Gm22361 snRNA snRNA MGP_WSBEiJ_T0061641.1 MGP_WSBEiJ_G0026902.1 mouse_genomes_project 3 100496954 100523108 - MGP_WSBEiJ_P0061641 Wdr3 protein_coding protein_coding MGP_WSBEiJ_T0061642.1 MGP_WSBEiJ_G0026902.1 mouse_genomes_project 3 100497509 100500409 - Wdr3 protein_coding retained_intron MGP_WSBEiJ_T0061643.1 MGP_WSBEiJ_G0026902.1 mouse_genomes_project 3 100501286 100523108 - Wdr3 protein_coding retained_intron MGP_WSBEiJ_T0061644.1 MGP_WSBEiJ_G0026902.1 mouse_genomes_project 3 100501288 100502368 - Wdr3 protein_coding retained_intron MGP_WSBEiJ_T0061645.1 MGP_WSBEiJ_G0026902.1 mouse_genomes_project 3 100517341 100523098 - MGP_WSBEiJ_P0061645 Wdr3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061646.1 MGP_WSBEiJ_G0026902.1 mouse_genomes_project 3 100517341 100523033 - MGP_WSBEiJ_P0061646 Wdr3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060307.1 MGP_WSBEiJ_G0026588.1 mouse_genomes_project 3 83878728 83924879 + MGP_WSBEiJ_P0060307 Tmem154 protein_coding protein_coding MGP_WSBEiJ_T0060308.1 MGP_WSBEiJ_G0026588.1 mouse_genomes_project 3 83878746 83899318 + Tmem154 protein_coding retained_intron MGP_WSBEiJ_T0060309.1 MGP_WSBEiJ_G0026588.1 mouse_genomes_project 3 83878906 83899209 + Tmem154 protein_coding processed_transcript MGP_WSBEiJ_T0060310.1 MGP_WSBEiJ_G0026588.1 mouse_genomes_project 3 83905994 83908334 + Tmem154 protein_coding retained_intron MGP_WSBEiJ_T0100776.1 MGP_WSBEiJ_G0039234.1 mouse_genomes_project 3 87862681 87863211 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004281.1 MGP_WSBEiJ_G0003741.1 mouse_genomes_project 3 124021252 124030924 + Gm43569 antisense antisense MGP_WSBEiJ_T0013569.1 MGP_WSBEiJ_G0011699.1 mouse_genomes_project 3 14434938 14435389 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007519.1 MGP_WSBEiJ_G0006155.1 mouse_genomes_project 3 100803013 100804311 + Gm43121 lincRNA lincRNA MGP_WSBEiJ_T0059188.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26100252 26102557 + MGP_WSBEiJ_P0059188 Rpl22l1 protein_coding protein_coding MGP_WSBEiJ_T0059189.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26100285 26102566 + MGP_WSBEiJ_P0059189 Rpl22l1 protein_coding protein_coding MGP_WSBEiJ_T0059190.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26100324 26102557 + Rpl22l1 protein_coding retained_intron MGP_WSBEiJ_T0059191.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26100326 26102564 + MGP_WSBEiJ_P0059191 Rpl22l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059192.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26100381 26101842 + Rpl22l1 protein_coding processed_transcript MGP_WSBEiJ_T0059193.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26100413 26102436 + Rpl22l1 protein_coding processed_transcript MGP_WSBEiJ_T0059194.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26100479 26102557 + Rpl22l1 protein_coding processed_transcript MGP_WSBEiJ_T0059195.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26101274 26102557 + Rpl22l1 protein_coding retained_intron MGP_WSBEiJ_T0059196.1 MGP_WSBEiJ_G0026360.1 mouse_genomes_project 3 26101315 26102558 + Rpl22l1 protein_coding retained_intron MGP_WSBEiJ_T0098191.1 MGP_WSBEiJ_G0036854.1 mouse_genomes_project 3 92728070 92728179 - Gm22577 snRNA snRNA MGP_WSBEiJ_T0062622.1 MGP_WSBEiJ_G0027106.1 mouse_genomes_project 3 131283589 131388839 + MGP_WSBEiJ_P0062622 Elovl6 protein_coding protein_coding MGP_WSBEiJ_T0062623.1 MGP_WSBEiJ_G0027106.1 mouse_genomes_project 3 131283601 131388824 + MGP_WSBEiJ_P0062623 Elovl6 protein_coding protein_coding MGP_WSBEiJ_T0062624.1 MGP_WSBEiJ_G0027106.1 mouse_genomes_project 3 131283620 131392355 + MGP_WSBEiJ_P0062624 Elovl6 protein_coding protein_coding MGP_WSBEiJ_T0062625.1 MGP_WSBEiJ_G0027106.1 mouse_genomes_project 3 131303600 131382091 + MGP_WSBEiJ_P0062625 Elovl6 protein_coding protein_coding MGP_WSBEiJ_T0059380.1 MGP_WSBEiJ_G0026391.1 mouse_genomes_project 3 31554858 31580131 - MGP_WSBEiJ_P0059380 Dnajc19 protein_coding protein_coding MGP_WSBEiJ_T0059381.1 MGP_WSBEiJ_G0026391.1 mouse_genomes_project 3 31576097 31580140 - MGP_WSBEiJ_P0059381 Dnajc19 protein_coding protein_coding MGP_WSBEiJ_T0059382.1 MGP_WSBEiJ_G0026391.1 mouse_genomes_project 3 31576142 31580129 - MGP_WSBEiJ_P0059382 Dnajc19 protein_coding protein_coding MGP_WSBEiJ_T0059383.1 MGP_WSBEiJ_G0026391.1 mouse_genomes_project 3 31576172 31578999 - Dnajc19 protein_coding retained_intron MGP_WSBEiJ_T0059384.1 MGP_WSBEiJ_G0026391.1 mouse_genomes_project 3 31576252 31580081 - MGP_WSBEiJ_P0059384 Dnajc19 protein_coding protein_coding MGP_WSBEiJ_T0007639.1 MGP_WSBEiJ_G0006254.1 mouse_genomes_project 3 149685908 149718645 + Gm29771 lincRNA lincRNA MGP_WSBEiJ_T0062245.1 MGP_WSBEiJ_G0027039.1 mouse_genomes_project 3 115986618 116216127 + MGP_WSBEiJ_P0062245 Olfm3 protein_coding protein_coding MGP_WSBEiJ_T0062246.1 MGP_WSBEiJ_G0027039.1 mouse_genomes_project 3 115987175 116211054 + MGP_WSBEiJ_P0062246 Olfm3 protein_coding protein_coding MGP_WSBEiJ_T0062247.1 MGP_WSBEiJ_G0027039.1 mouse_genomes_project 3 116170399 116215697 + MGP_WSBEiJ_P0062247 Olfm3 protein_coding protein_coding MGP_WSBEiJ_T0061676.1 MGP_WSBEiJ_G0026911.1 mouse_genomes_project 3 101691762 101703711 - MGP_WSBEiJ_P0061676 Cd2 protein_coding protein_coding MGP_WSBEiJ_T0061677.1 MGP_WSBEiJ_G0026911.1 mouse_genomes_project 3 101691771 101696233 - Cd2 protein_coding retained_intron MGP_WSBEiJ_T0061678.1 MGP_WSBEiJ_G0026911.1 mouse_genomes_project 3 101698859 101703651 - Cd2 protein_coding retained_intron MGP_WSBEiJ_T0059034.1 MGP_WSBEiJ_G0026328.1 mouse_genomes_project 3 15002690 15003240 + MGP_WSBEiJ_P0059034 Cypt12 protein_coding protein_coding MGP_WSBEiJ_T0004125.1 MGP_WSBEiJ_G0003638.1 mouse_genomes_project 3 25991576 26072956 - antisense antisense MGP_WSBEiJ_T0004126.1 MGP_WSBEiJ_G0003638.1 mouse_genomes_project 3 26028549 26031983 - antisense antisense MGP_WSBEiJ_T0100764.1 MGP_WSBEiJ_G0039222.1 mouse_genomes_project 3 69267610 69268645 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010391.1 MGP_WSBEiJ_G0008548.1 mouse_genomes_project 3 144916304 144916391 - Mir6381 miRNA miRNA MGP_WSBEiJ_T0100069.1 MGP_WSBEiJ_G0038686.1 mouse_genomes_project 3 54045691 54046659 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100070.1 MGP_WSBEiJ_G0038686.1 mouse_genomes_project 3 54045850 54046991 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0061055.1 MGP_WSBEiJ_G0026752.1 mouse_genomes_project 3 92411807 92413114 - MGP_WSBEiJ_P0061055 Lce1b protein_coding protein_coding MGP_WSBEiJ_T0062085.1 MGP_WSBEiJ_G0027005.1 mouse_genomes_project 3 108918018 108925723 - MGP_WSBEiJ_P0062085 Gpr61 protein_coding protein_coding MGP_WSBEiJ_T0062086.1 MGP_WSBEiJ_G0027005.1 mouse_genomes_project 3 108918354 108925723 - MGP_WSBEiJ_P0062086 Gpr61 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001111.1 MGP_WSBEiJ_G0001043.1 mouse_genomes_project 3 32173522 32176375 + TEC TEC MGP_WSBEiJ_T0061030.1 MGP_WSBEiJ_G0026732.1 mouse_genomes_project 3 91924568 91929389 + MGP_WSBEiJ_P0061030 protein_coding protein_coding MGP_WSBEiJ_T0061032.1 MGP_WSBEiJ_G0026732.1 mouse_genomes_project 3 91925730 91926409 + MGP_WSBEiJ_P0061032 protein_coding protein_coding MGP_WSBEiJ_T0062681.1 MGP_WSBEiJ_G0027117.1 mouse_genomes_project 3 132427545 132447218 + MGP_WSBEiJ_P0062681 Etnppl protein_coding protein_coding MGP_WSBEiJ_T0062682.1 MGP_WSBEiJ_G0027117.1 mouse_genomes_project 3 132427666 132449896 + MGP_WSBEiJ_P0062682 Etnppl protein_coding protein_coding MGP_WSBEiJ_T0062683.1 MGP_WSBEiJ_G0027117.1 mouse_genomes_project 3 132427669 132434027 + Etnppl protein_coding retained_intron MGP_WSBEiJ_T0062684.1 MGP_WSBEiJ_G0027117.1 mouse_genomes_project 3 132427696 132434059 + Etnppl protein_coding retained_intron MGP_WSBEiJ_T0062685.1 MGP_WSBEiJ_G0027117.1 mouse_genomes_project 3 132427791 132447086 + MGP_WSBEiJ_P0062685 Etnppl protein_coding protein_coding MGP_WSBEiJ_T0062686.1 MGP_WSBEiJ_G0027117.1 mouse_genomes_project 3 132438927 132442132 + MGP_WSBEiJ_P0062686 Etnppl protein_coding protein_coding MGP_WSBEiJ_T0011334.1 MGP_WSBEiJ_G0009491.1 mouse_genomes_project 3 27990245 27990657 - 1600017P15Rik misc_RNA misc_RNA MGP_WSBEiJ_T0013696.1 MGP_WSBEiJ_G0011826.1 mouse_genomes_project 3 57747878 57752245 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013831.1 MGP_WSBEiJ_G0011961.1 mouse_genomes_project 3 101675939 101676499 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001243.1 MGP_WSBEiJ_G0001173.1 mouse_genomes_project 3 98193771 98198893 + TEC TEC MGP_WSBEiJ_T0007569.1 MGP_WSBEiJ_G0006194.1 mouse_genomes_project 3 124078896 124087678 - Gm43568 lincRNA lincRNA MGP_WSBEiJ_T0007570.1 MGP_WSBEiJ_G0006194.1 mouse_genomes_project 3 124084722 124087173 - Gm43568 lincRNA lincRNA MGP_WSBEiJ_T0007571.1 MGP_WSBEiJ_G0006194.1 mouse_genomes_project 3 124086137 124087395 - Gm43568 lincRNA lincRNA MGP_WSBEiJ_T0062109.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109173128 109177467 + MGP_WSBEiJ_P0062109 Psrc1 protein_coding protein_coding MGP_WSBEiJ_T0062110.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109173140 109174698 + Psrc1 protein_coding processed_transcript MGP_WSBEiJ_T0062111.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109173141 109175892 + Psrc1 protein_coding processed_transcript MGP_WSBEiJ_T0062112.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109173148 109177519 + MGP_WSBEiJ_P0062112 Psrc1 protein_coding protein_coding MGP_WSBEiJ_T0062113.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109173168 109175673 + Psrc1 protein_coding processed_transcript MGP_WSBEiJ_T0062114.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109173205 109174699 + MGP_WSBEiJ_P0062114 Psrc1 protein_coding protein_coding MGP_WSBEiJ_T0062115.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109173226 109175912 + Psrc1 protein_coding processed_transcript MGP_WSBEiJ_T0062116.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109173683 109175234 + Psrc1 protein_coding retained_intron MGP_WSBEiJ_T0062117.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109174143 109176163 + Psrc1 protein_coding retained_intron MGP_WSBEiJ_T0062118.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109174146 109175994 + Psrc1 protein_coding retained_intron MGP_WSBEiJ_T0062119.1 MGP_WSBEiJ_G0027013.1 mouse_genomes_project 3 109175354 109176002 + Psrc1 protein_coding processed_transcript MGP_WSBEiJ_T0058941.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5745903 5825532 - MGP_WSBEiJ_P0058941 Tpd52 protein_coding protein_coding MGP_WSBEiJ_T0058942.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5746875 5784224 - MGP_WSBEiJ_P0058942 Tpd52 protein_coding protein_coding MGP_WSBEiJ_T0058943.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5749105 5825477 - MGP_WSBEiJ_P0058943 Tpd52 protein_coding protein_coding MGP_WSBEiJ_T0058944.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5749800 5784226 - MGP_WSBEiJ_P0058944 Tpd52 protein_coding protein_coding MGP_WSBEiJ_T0058945.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5749902 5815034 - MGP_WSBEiJ_P0058945 Tpd52 protein_coding protein_coding MGP_WSBEiJ_T0058946.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5749966 5825493 - MGP_WSBEiJ_P0058946 Tpd52 protein_coding protein_coding MGP_WSBEiJ_T0058947.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5750074 5782523 - MGP_WSBEiJ_P0058947 Tpd52 protein_coding protein_coding MGP_WSBEiJ_T0058948.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5750149 5825532 - MGP_WSBEiJ_P0058948 Tpd52 protein_coding protein_coding MGP_WSBEiJ_T0058949.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5766131 5825491 - Tpd52 protein_coding processed_transcript MGP_WSBEiJ_T0058950.1 MGP_WSBEiJ_G0026297.1 mouse_genomes_project 3 5766193 5825532 - MGP_WSBEiJ_P0058950 Tpd52 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011335.1 MGP_WSBEiJ_G0009492.1 mouse_genomes_project 3 32079065 32079279 + Gm27403 misc_RNA misc_RNA MGP_WSBEiJ_T0059435.1 MGP_WSBEiJ_G0026402.1 mouse_genomes_project 3 34183553 34196548 + MGP_WSBEiJ_P0059435 Exosc9 protein_coding protein_coding MGP_WSBEiJ_T0059436.1 MGP_WSBEiJ_G0026402.1 mouse_genomes_project 3 34183553 34194081 + MGP_WSBEiJ_P0059436 Exosc9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059437.1 MGP_WSBEiJ_G0026402.1 mouse_genomes_project 3 34183561 34187716 + Exosc9 protein_coding retained_intron MGP_WSBEiJ_T0059438.1 MGP_WSBEiJ_G0026402.1 mouse_genomes_project 3 34183574 34187933 + Exosc9 protein_coding retained_intron MGP_WSBEiJ_T0059439.1 MGP_WSBEiJ_G0026402.1 mouse_genomes_project 3 34183585 34187887 + MGP_WSBEiJ_P0059439 Exosc9 protein_coding protein_coding MGP_WSBEiJ_T0059440.1 MGP_WSBEiJ_G0026402.1 mouse_genomes_project 3 34183598 34192324 + Exosc9 protein_coding retained_intron MGP_WSBEiJ_T0059441.1 MGP_WSBEiJ_G0026402.1 mouse_genomes_project 3 34186492 34194056 + MGP_WSBEiJ_P0059441 Exosc9 protein_coding protein_coding MGP_WSBEiJ_T0059442.1 MGP_WSBEiJ_G0026402.1 mouse_genomes_project 3 34193111 34196466 + MGP_WSBEiJ_P0059442 Exosc9 protein_coding protein_coding MGP_WSBEiJ_T0001076.1 MGP_WSBEiJ_G0001008.1 mouse_genomes_project 3 6339966 6343731 + TEC TEC MGP_WSBEiJ_T0062995.1 MGP_WSBEiJ_G0027180.1 mouse_genomes_project 3 144990617 145037007 + MGP_WSBEiJ_P0062995 Kyat3 protein_coding protein_coding MGP_WSBEiJ_T0062996.1 MGP_WSBEiJ_G0027180.1 mouse_genomes_project 3 144990652 145018681 + MGP_WSBEiJ_P0062996 Kyat3 protein_coding protein_coding MGP_WSBEiJ_T0062997.1 MGP_WSBEiJ_G0027180.1 mouse_genomes_project 3 144990660 145036818 + MGP_WSBEiJ_P0062997 Kyat3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062998.1 MGP_WSBEiJ_G0027180.1 mouse_genomes_project 3 145004521 145038077 + MGP_WSBEiJ_P0062998 Kyat3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062999.1 MGP_WSBEiJ_G0027180.1 mouse_genomes_project 3 145015583 145023781 + Kyat3 protein_coding processed_transcript MGP_WSBEiJ_T0063000.1 MGP_WSBEiJ_G0027180.1 mouse_genomes_project 3 145020883 145022844 + Kyat3 protein_coding retained_intron MGP_WSBEiJ_T0063001.1 MGP_WSBEiJ_G0027180.1 mouse_genomes_project 3 145030098 145033433 + Kyat3 protein_coding retained_intron MGP_WSBEiJ_T0063002.1 MGP_WSBEiJ_G0027180.1 mouse_genomes_project 3 145030996 145036816 + Kyat3 protein_coding processed_transcript MGP_WSBEiJ_T0017427.1 MGP_WSBEiJ_G0014950.1 mouse_genomes_project 3 150747042 150760718 + Gm43574 processed_transcript processed_transcript MGP_WSBEiJ_T0062338.1 MGP_WSBEiJ_G0027059.1 mouse_genomes_project 3 118532897 118580071 - MGP_WSBEiJ_P0062338 Plppr4 protein_coding protein_coding MGP_WSBEiJ_T0062339.1 MGP_WSBEiJ_G0027059.1 mouse_genomes_project 3 118535320 118580071 - Plppr4 protein_coding retained_intron MGP_WSBEiJ_T0062340.1 MGP_WSBEiJ_G0027059.1 mouse_genomes_project 3 118536123 118579443 - MGP_WSBEiJ_P0062340 Plppr4 protein_coding protein_coding MGP_WSBEiJ_T0013621.1 MGP_WSBEiJ_G0011751.1 mouse_genomes_project 3 34780056 34781154 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007480.1 MGP_WSBEiJ_G0006129.1 mouse_genomes_project 3 85415035 85417829 + Gm37933 lincRNA lincRNA MGP_WSBEiJ_T0060264.1 MGP_WSBEiJ_G0026579.1 mouse_genomes_project 3 83001017 83006513 - MGP_WSBEiJ_P0060264 Tlr2 protein_coding protein_coding MGP_WSBEiJ_T0013596.1 MGP_WSBEiJ_G0011726.1 mouse_genomes_project 3 24481462 24481850 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100086.1 MGP_WSBEiJ_G0038695.1 mouse_genomes_project 3 145193886 145194401 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013744.1 MGP_WSBEiJ_G0011874.1 mouse_genomes_project 3 72780431 72781508 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013595.1 MGP_WSBEiJ_G0011725.1 mouse_genomes_project 3 24240233 24241398 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004211.1 MGP_WSBEiJ_G0003701.1 mouse_genomes_project 3 94907137 94909724 - A730011C13Rik antisense antisense MGP_WSBEiJ_T0004212.1 MGP_WSBEiJ_G0003701.1 mouse_genomes_project 3 94907770 94910078 - A730011C13Rik antisense antisense MGP_WSBEiJ_T0060581.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88004030 88011489 + Arhgef2 protein_coding processed_transcript MGP_WSBEiJ_T0060582.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88004235 88014251 + Arhgef2 protein_coding processed_transcript MGP_WSBEiJ_T0060583.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88004367 88045471 + MGP_WSBEiJ_P0060583 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060584.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88011332 88014413 + Arhgef2 protein_coding processed_transcript MGP_WSBEiJ_T0060585.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88011520 88031940 + MGP_WSBEiJ_P0060585 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060586.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88012278 88032844 + MGP_WSBEiJ_P0060586 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060587.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88013054 88046074 + MGP_WSBEiJ_P0060587 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060588.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88013054 88046594 + MGP_WSBEiJ_P0060588 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060589.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88013428 88045437 + MGP_WSBEiJ_P0060589 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060590.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88019475 88045405 + MGP_WSBEiJ_P0060590 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060591.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88019488 88037897 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060592.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88019609 88048077 + MGP_WSBEiJ_P0060592 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060593.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88019642 88046592 + MGP_WSBEiJ_P0060593 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060594.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88019810 88032807 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060595.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88019898 88031405 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060596.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88020809 88031271 + MGP_WSBEiJ_P0060596 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060597.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88021271 88039069 + MGP_WSBEiJ_P0060597 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060598.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88021700 88031962 + MGP_WSBEiJ_P0060598 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060599.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88027786 88031321 + MGP_WSBEiJ_P0060599 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060600.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88027813 88030446 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060601.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88027817 88031337 + MGP_WSBEiJ_P0060601 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060602.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88027915 88030679 + MGP_WSBEiJ_P0060602 Arhgef2 protein_coding protein_coding MGP_WSBEiJ_T0060603.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88030255 88033007 + Arhgef2 protein_coding processed_transcript MGP_WSBEiJ_T0060604.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88030540 88031935 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060605.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88031077 88031983 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060606.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88031262 88036161 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060607.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88032667 88033421 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060608.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88040967 88042454 + Arhgef2 protein_coding retained_intron MGP_WSBEiJ_T0060609.1 MGP_WSBEiJ_G0026647.1 mouse_genomes_project 3 88042473 88045507 + Arhgef2 protein_coding processed_transcript MGP_WSBEiJ_T0013971.1 MGP_WSBEiJ_G0012101.1 mouse_genomes_project 3 149381564 149382243 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062545.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128529761 128779415 - MGP_WSBEiJ_P0062545 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062546.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128529768 128610164 - MGP_WSBEiJ_P0062546 protein_coding protein_coding MGP_WSBEiJ_T0062547.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128529770 128532158 - protein_coding retained_intron MGP_WSBEiJ_T0062548.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128529770 128555058 - MGP_WSBEiJ_P0062548 protein_coding protein_coding MGP_WSBEiJ_T0062549.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128532097 128537951 - MGP_WSBEiJ_P0062549 protein_coding protein_coding MGP_WSBEiJ_T0062550.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128532098 128537951 - MGP_WSBEiJ_P0062550 protein_coding protein_coding MGP_WSBEiJ_T0062551.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128533734 128536516 - protein_coding retained_intron MGP_WSBEiJ_T0062552.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128541323 128543245 - protein_coding retained_intron MGP_WSBEiJ_T0062553.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128549437 128567832 - MGP_WSBEiJ_P0062553 protein_coding protein_coding MGP_WSBEiJ_T0062554.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128551782 128567631 - MGP_WSBEiJ_P0062554 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062555.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128558783 129036775 - MGP_WSBEiJ_P0062555 protein_coding protein_coding MGP_WSBEiJ_T0062556.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128561928 128610140 - protein_coding retained_intron MGP_WSBEiJ_T0062557.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128570766 129134435 - MGP_WSBEiJ_P0062557 protein_coding protein_coding MGP_WSBEiJ_T0062558.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128571578 129036714 - MGP_WSBEiJ_P0062558 protein_coding protein_coding MGP_WSBEiJ_T0062559.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128627574 128636524 - protein_coding retained_intron MGP_WSBEiJ_T0062560.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128637049 129036747 - MGP_WSBEiJ_P0062560 protein_coding protein_coding MGP_WSBEiJ_T0062561.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128637076 129036747 - MGP_WSBEiJ_P0062561 protein_coding protein_coding MGP_WSBEiJ_T0062562.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128644234 128779955 - MGP_WSBEiJ_P0062562 protein_coding protein_coding MGP_WSBEiJ_T0062563.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128644234 129036683 - MGP_WSBEiJ_P0062563 protein_coding protein_coding MGP_WSBEiJ_T0062564.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128692237 128845695 - MGP_WSBEiJ_P0062564 protein_coding protein_coding MGP_WSBEiJ_T0062565.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128693731 128779847 - protein_coding retained_intron MGP_WSBEiJ_T0062566.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128695551 129036670 - MGP_WSBEiJ_P0062566 protein_coding protein_coding MGP_WSBEiJ_T0062567.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128777318 128779813 - protein_coding retained_intron MGP_WSBEiJ_T0062568.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128958075 129036711 - protein_coding retained_intron MGP_WSBEiJ_T0062569.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 128959675 129134087 - protein_coding retained_intron MGP_WSBEiJ_T0062570.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 129131191 129134345 - protein_coding retained_intron MGP_WSBEiJ_T0062571.1 MGP_WSBEiJ_G0027095.1 mouse_genomes_project 3 129133747 129134086 - MGP_WSBEiJ_P0062571 protein_coding protein_coding MGP_WSBEiJ_T0059766.1 MGP_WSBEiJ_G0026457.1 mouse_genomes_project 3 52898966 52914472 + MGP_WSBEiJ_P0059766 Alg5 protein_coding protein_coding MGP_WSBEiJ_T0059767.1 MGP_WSBEiJ_G0026457.1 mouse_genomes_project 3 52898986 52915995 + MGP_WSBEiJ_P0059767 Alg5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059768.1 MGP_WSBEiJ_G0026457.1 mouse_genomes_project 3 52898994 52910149 + MGP_WSBEiJ_P0059768 Alg5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059769.1 MGP_WSBEiJ_G0026457.1 mouse_genomes_project 3 52899000 52903168 + Alg5 protein_coding retained_intron MGP_WSBEiJ_T0007443.1 MGP_WSBEiJ_G0006097.1 mouse_genomes_project 3 59157066 59163439 + Gm38326 lincRNA lincRNA MGP_WSBEiJ_T0098181.1 MGP_WSBEiJ_G0036844.1 mouse_genomes_project 3 86227998 86228158 + Gm23376 snRNA snRNA MGP_WSBEiJ_T0013893.1 MGP_WSBEiJ_G0012023.1 mouse_genomes_project 3 122629886 122630658 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061111.1 MGP_WSBEiJ_G0026787.1 mouse_genomes_project 3 94236972 94239223 - protein_coding retained_intron MGP_WSBEiJ_T0061112.1 MGP_WSBEiJ_G0026787.1 mouse_genomes_project 3 94237724 94241173 - MGP_WSBEiJ_P0061112 protein_coding protein_coding MGP_WSBEiJ_T0061113.1 MGP_WSBEiJ_G0026787.1 mouse_genomes_project 3 94237945 94249093 - MGP_WSBEiJ_P0061113 protein_coding protein_coding MGP_WSBEiJ_T0061114.1 MGP_WSBEiJ_G0026787.1 mouse_genomes_project 3 94237945 94249011 - MGP_WSBEiJ_P0061114 protein_coding protein_coding MGP_WSBEiJ_T0061115.1 MGP_WSBEiJ_G0026787.1 mouse_genomes_project 3 94237945 94239672 - MGP_WSBEiJ_P0061115 protein_coding protein_coding MGP_WSBEiJ_T0061116.1 MGP_WSBEiJ_G0026787.1 mouse_genomes_project 3 94237945 94241124 - MGP_WSBEiJ_P0061116 protein_coding protein_coding MGP_WSBEiJ_T0061117.1 MGP_WSBEiJ_G0026787.1 mouse_genomes_project 3 94237945 94241194 - MGP_WSBEiJ_P0061117 protein_coding protein_coding MGP_WSBEiJ_T0061118.1 MGP_WSBEiJ_G0026787.1 mouse_genomes_project 3 94239670 94241320 - protein_coding retained_intron MGP_WSBEiJ_T0097361.1 MGP_WSBEiJ_G0036035.1 mouse_genomes_project 3 104700660 104704906 - Gm42702 sense_intronic sense_intronic MGP_WSBEiJ_T0004225.1 MGP_WSBEiJ_G0003708.1 mouse_genomes_project 3 96235765 96240014 + antisense antisense MGP_WSBEiJ_T0001337.1 MGP_WSBEiJ_G0001266.1 mouse_genomes_project 3 149987602 149992100 - TEC TEC MGP_WSBEiJ_T0059770.1 MGP_WSBEiJ_G0026458.1 mouse_genomes_project 3 52920277 52973923 + MGP_WSBEiJ_P0059770 Smad9 protein_coding protein_coding MGP_WSBEiJ_T0061167.1 MGP_WSBEiJ_G0026795.1 mouse_genomes_project 3 94769629 94772499 - MGP_WSBEiJ_P0061167 Psmb4 protein_coding protein_coding MGP_WSBEiJ_T0061168.1 MGP_WSBEiJ_G0026795.1 mouse_genomes_project 3 94769858 94770380 - Psmb4 protein_coding retained_intron MGP_WSBEiJ_T0061169.1 MGP_WSBEiJ_G0026795.1 mouse_genomes_project 3 94770434 94772400 - Psmb4 protein_coding retained_intron MGP_WSBEiJ_T0061170.1 MGP_WSBEiJ_G0026795.1 mouse_genomes_project 3 94770453 94772283 - Psmb4 protein_coding retained_intron MGP_WSBEiJ_T0061171.1 MGP_WSBEiJ_G0026795.1 mouse_genomes_project 3 94770843 94771492 - Psmb4 protein_coding retained_intron MGP_WSBEiJ_T0013586.1 MGP_WSBEiJ_G0011716.1 mouse_genomes_project 3 18746036 18746808 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059101.1 MGP_WSBEiJ_G0026342.1 mouse_genomes_project 3 17315265 17344351 - MGP_WSBEiJ_P0059101 Cpa3 protein_coding protein_coding MGP_WSBEiJ_T0059102.1 MGP_WSBEiJ_G0026342.1 mouse_genomes_project 3 17330026 17342918 - Cpa3 protein_coding processed_transcript MGP_WSBEiJ_T0007449.1 MGP_WSBEiJ_G0006103.1 mouse_genomes_project 3 67369327 67370496 + Gm35584 lincRNA lincRNA MGP_WSBEiJ_T0098201.1 MGP_WSBEiJ_G0036864.1 mouse_genomes_project 3 103445004 103445169 - Gm22826 snRNA snRNA MGP_WSBEiJ_T0001260.1 MGP_WSBEiJ_G0001190.1 mouse_genomes_project 3 117719654 117722008 - TEC TEC MGP_WSBEiJ_T0007477.1 MGP_WSBEiJ_G0006126.1 mouse_genomes_project 3 83544982 83570130 - 4930565D16Rik lincRNA lincRNA MGP_WSBEiJ_T0004156.1 MGP_WSBEiJ_G0003659.1 mouse_genomes_project 3 49833078 49839416 + Gm37229 antisense antisense MGP_WSBEiJ_T0099446.1 MGP_WSBEiJ_G0038109.1 mouse_genomes_project 3 85372454 85372576 + Gm25188 snoRNA snoRNA MGP_WSBEiJ_T0100781.1 MGP_WSBEiJ_G0039239.1 mouse_genomes_project 3 92842381 92842606 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001115.1 MGP_WSBEiJ_G0001047.1 mouse_genomes_project 3 33558582 33560443 - TEC TEC MGP_WSBEiJ_T0100785.1 MGP_WSBEiJ_G0039243.1 mouse_genomes_project 3 94080960 94081153 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007531.1 MGP_WSBEiJ_G0006165.1 mouse_genomes_project 3 103564995 103566313 + Gm43062 lincRNA lincRNA MGP_WSBEiJ_T0013794.1 MGP_WSBEiJ_G0011924.1 mouse_genomes_project 3 92692004 92692396 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062750.1 MGP_WSBEiJ_G0027132.1 mouse_genomes_project 3 134957461 135077362 - MGP_WSBEiJ_P0062750 protein_coding protein_coding MGP_WSBEiJ_T0062751.1 MGP_WSBEiJ_G0027132.1 mouse_genomes_project 3 134961637 134978120 - MGP_WSBEiJ_P0062751 protein_coding protein_coding MGP_WSBEiJ_T0062752.1 MGP_WSBEiJ_G0027132.1 mouse_genomes_project 3 135000204 135077362 - MGP_WSBEiJ_P0062752 protein_coding protein_coding MGP_WSBEiJ_T0062753.1 MGP_WSBEiJ_G0027132.1 mouse_genomes_project 3 135012930 135077422 - MGP_WSBEiJ_P0062753 protein_coding protein_coding MGP_WSBEiJ_T0061666.1 MGP_WSBEiJ_G0026908.1 mouse_genomes_project 3 101336376 101368526 - MGP_WSBEiJ_P0061666 Ttf2 protein_coding protein_coding MGP_WSBEiJ_T0061667.1 MGP_WSBEiJ_G0026908.1 mouse_genomes_project 3 101339456 101343898 - Ttf2 protein_coding retained_intron MGP_WSBEiJ_T0061668.1 MGP_WSBEiJ_G0026908.1 mouse_genomes_project 3 101343890 101368526 - Ttf2 protein_coding retained_intron MGP_WSBEiJ_T0061669.1 MGP_WSBEiJ_G0026908.1 mouse_genomes_project 3 101345003 101350757 - MGP_WSBEiJ_P0061669 Ttf2 protein_coding protein_coding MGP_WSBEiJ_T0061670.1 MGP_WSBEiJ_G0026908.1 mouse_genomes_project 3 101356908 101358146 - Ttf2 protein_coding retained_intron MGP_WSBEiJ_T0061052.1 MGP_WSBEiJ_G0026750.1 mouse_genomes_project 3 92371523 92373098 - MGP_WSBEiJ_P0061052 Lce6a protein_coding protein_coding MGP_WSBEiJ_T0061053.1 MGP_WSBEiJ_G0026750.1 mouse_genomes_project 3 92371527 92372618 - MGP_WSBEiJ_P0061053 Lce6a protein_coding protein_coding MGP_WSBEiJ_T0062966.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144447051 144608946 - MGP_WSBEiJ_P0062966 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062967.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144450139 144608831 - MGP_WSBEiJ_P0062967 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062968.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144450139 144603973 - MGP_WSBEiJ_P0062968 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062969.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144450139 144603973 - MGP_WSBEiJ_P0062969 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062970.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144450139 144603973 - MGP_WSBEiJ_P0062970 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062971.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144451920 144454862 - Pdlim5 protein_coding retained_intron MGP_WSBEiJ_T0062972.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144457680 144513959 - MGP_WSBEiJ_P0062972 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062973.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144457739 144514422 - MGP_WSBEiJ_P0062973 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062974.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144512054 144604015 - MGP_WSBEiJ_P0062974 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062975.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144512289 144608860 - MGP_WSBEiJ_P0062975 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062976.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144512294 144604015 - MGP_WSBEiJ_P0062976 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062977.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144513200 144608871 - MGP_WSBEiJ_P0062977 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0062978.1 MGP_WSBEiJ_G0027174.1 mouse_genomes_project 3 144513307 144608949 - MGP_WSBEiJ_P0062978 Pdlim5 protein_coding protein_coding MGP_WSBEiJ_T0013557.1 MGP_WSBEiJ_G0011687.1 mouse_genomes_project 3 11351687 11352166 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013896.1 MGP_WSBEiJ_G0012026.1 mouse_genomes_project 3 123271733 123272110 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099481.1 MGP_WSBEiJ_G0038144.1 mouse_genomes_project 3 146007856 146007981 + Gm24728 snoRNA snoRNA MGP_WSBEiJ_T0098146.1 MGP_WSBEiJ_G0036809.1 mouse_genomes_project 3 14854387 14854514 - Gm23441 snRNA snRNA MGP_WSBEiJ_T0007577.1 MGP_WSBEiJ_G0006200.1 mouse_genomes_project 3 130323256 130600168 + lincRNA lincRNA MGP_WSBEiJ_T0097372.1 MGP_WSBEiJ_G0036046.1 mouse_genomes_project 3 105433266 105434779 - Gm42658 sense_intronic sense_intronic MGP_WSBEiJ_T0100067.1 MGP_WSBEiJ_G0038684.1 mouse_genomes_project 3 11542606 11542886 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0059712.1 MGP_WSBEiJ_G0026448.1 mouse_genomes_project 3 51533112 51551187 + MGP_WSBEiJ_P0059712 Proser1 protein_coding protein_coding MGP_WSBEiJ_T0059713.1 MGP_WSBEiJ_G0026448.1 mouse_genomes_project 3 51533253 51534193 + Proser1 protein_coding retained_intron MGP_WSBEiJ_T0059714.1 MGP_WSBEiJ_G0026448.1 mouse_genomes_project 3 51533378 51543636 + Proser1 protein_coding retained_intron MGP_WSBEiJ_T0059715.1 MGP_WSBEiJ_G0026448.1 mouse_genomes_project 3 51547564 51549352 + Proser1 protein_coding retained_intron MGP_WSBEiJ_T0060311.1 MGP_WSBEiJ_G0026589.1 mouse_genomes_project 3 84040916 84211115 + MGP_WSBEiJ_P0060311 Fbxw7 protein_coding protein_coding MGP_WSBEiJ_T0060312.1 MGP_WSBEiJ_G0026589.1 mouse_genomes_project 3 84041126 84209599 + Fbxw7 protein_coding retained_intron MGP_WSBEiJ_T0060313.1 MGP_WSBEiJ_G0026589.1 mouse_genomes_project 3 84092836 84211115 + MGP_WSBEiJ_P0060313 Fbxw7 protein_coding protein_coding MGP_WSBEiJ_T0060314.1 MGP_WSBEiJ_G0026589.1 mouse_genomes_project 3 84156828 84211114 + MGP_WSBEiJ_P0060314 Fbxw7 protein_coding protein_coding MGP_WSBEiJ_T0060315.1 MGP_WSBEiJ_G0026589.1 mouse_genomes_project 3 84184098 84209563 + MGP_WSBEiJ_P0060315 Fbxw7 protein_coding protein_coding MGP_WSBEiJ_T0001083.1 MGP_WSBEiJ_G0001015.1 mouse_genomes_project 3 15680036 15683979 + TEC TEC MGP_WSBEiJ_T0062375.1 MGP_WSBEiJ_G0027065.1 mouse_genomes_project 3 122551632 122635443 - MGP_WSBEiJ_P0062375 Tmem56 protein_coding protein_coding MGP_WSBEiJ_T0062376.1 MGP_WSBEiJ_G0027065.1 mouse_genomes_project 3 122551879 122615717 - MGP_WSBEiJ_P0062376 Tmem56 protein_coding protein_coding MGP_WSBEiJ_T0062377.1 MGP_WSBEiJ_G0027065.1 mouse_genomes_project 3 122551879 122615691 - MGP_WSBEiJ_P0062377 Tmem56 protein_coding protein_coding MGP_WSBEiJ_T0062378.1 MGP_WSBEiJ_G0027065.1 mouse_genomes_project 3 122555909 122605250 - MGP_WSBEiJ_P0062378 Tmem56 protein_coding protein_coding MGP_WSBEiJ_T0062379.1 MGP_WSBEiJ_G0027065.1 mouse_genomes_project 3 122578842 122635443 - MGP_WSBEiJ_P0062379 Tmem56 protein_coding protein_coding MGP_WSBEiJ_T0062380.1 MGP_WSBEiJ_G0027065.1 mouse_genomes_project 3 122578886 122582042 - Tmem56 protein_coding retained_intron MGP_WSBEiJ_T0062381.1 MGP_WSBEiJ_G0027065.1 mouse_genomes_project 3 122586190 122635340 - Tmem56 protein_coding processed_transcript MGP_WSBEiJ_T0062382.1 MGP_WSBEiJ_G0027065.1 mouse_genomes_project 3 122586243 122635347 - Tmem56 protein_coding processed_transcript MGP_WSBEiJ_T0007576.1 MGP_WSBEiJ_G0006199.1 mouse_genomes_project 3 129590311 129634942 + 9830132P13Rik lincRNA lincRNA MGP_WSBEiJ_T0004320.1 MGP_WSBEiJ_G0003769.1 mouse_genomes_project 3 147896268 147898293 - 9530034A14Rik antisense antisense MGP_WSBEiJ_T0060261.1 MGP_WSBEiJ_G0026578.1 mouse_genomes_project 3 82923664 82931657 + MGP_WSBEiJ_P0060261 Sfrp2 protein_coding protein_coding MGP_WSBEiJ_T0060262.1 MGP_WSBEiJ_G0026578.1 mouse_genomes_project 3 82923908 82927487 + Sfrp2 protein_coding processed_transcript MGP_WSBEiJ_T0060263.1 MGP_WSBEiJ_G0026578.1 mouse_genomes_project 3 82924196 82929490 + Sfrp2 protein_coding processed_transcript MGP_WSBEiJ_T0001265.1 MGP_WSBEiJ_G0001195.1 mouse_genomes_project 3 121065009 121067361 - TEC TEC MGP_WSBEiJ_T0061324.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95379423 95436158 + Arnt protein_coding retained_intron MGP_WSBEiJ_T0061325.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95379423 95440103 + MGP_WSBEiJ_P0061325 Arnt protein_coding protein_coding MGP_WSBEiJ_T0061326.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95379425 95441775 + MGP_WSBEiJ_P0061326 Arnt protein_coding protein_coding MGP_WSBEiJ_T0061327.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95379910 95441772 + MGP_WSBEiJ_P0061327 Arnt protein_coding protein_coding MGP_WSBEiJ_T0061328.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95379934 95440107 + MGP_WSBEiJ_P0061328 Arnt protein_coding protein_coding MGP_WSBEiJ_T0061329.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95379934 95406211 + MGP_WSBEiJ_P0061329 Arnt protein_coding protein_coding MGP_WSBEiJ_T0061330.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95380025 95437226 + Arnt protein_coding retained_intron MGP_WSBEiJ_T0061331.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95411612 95440103 + Arnt protein_coding retained_intron MGP_WSBEiJ_T0061332.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95418383 95424485 + Arnt protein_coding retained_intron MGP_WSBEiJ_T0061333.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95420360 95431852 + MGP_WSBEiJ_P0061333 Arnt protein_coding protein_coding MGP_WSBEiJ_T0061334.1 MGP_WSBEiJ_G0026820.1 mouse_genomes_project 3 95433940 95434942 + Arnt protein_coding retained_intron MGP_WSBEiJ_T0013612.1 MGP_WSBEiJ_G0011742.1 mouse_genomes_project 3 33466415 33467404 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062860.1 MGP_WSBEiJ_G0027149.1 mouse_genomes_project 3 139346093 139443694 + MGP_WSBEiJ_P0062860 Emcn protein_coding protein_coding MGP_WSBEiJ_T0062861.1 MGP_WSBEiJ_G0027149.1 mouse_genomes_project 3 139346116 139433440 + Emcn protein_coding retained_intron MGP_WSBEiJ_T0062862.1 MGP_WSBEiJ_G0027149.1 mouse_genomes_project 3 139346169 139442578 + MGP_WSBEiJ_P0062862 Emcn protein_coding protein_coding MGP_WSBEiJ_T0062863.1 MGP_WSBEiJ_G0027149.1 mouse_genomes_project 3 139346200 139438848 + MGP_WSBEiJ_P0062863 Emcn protein_coding protein_coding MGP_WSBEiJ_T0060509.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87705601 87732372 + MGP_WSBEiJ_P0060509 Smg5 protein_coding protein_coding MGP_WSBEiJ_T0060510.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87705652 87722766 + Smg5 protein_coding retained_intron MGP_WSBEiJ_T0060511.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87705706 87713377 + Smg5 protein_coding retained_intron MGP_WSBEiJ_T0060512.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87710780 87717626 + Smg5 protein_coding processed_transcript MGP_WSBEiJ_T0060513.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87712501 87720769 + MGP_WSBEiJ_P0060513 Smg5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060514.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87722527 87724674 + Smg5 protein_coding retained_intron MGP_WSBEiJ_T0060515.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87728227 87729671 + Smg5 protein_coding retained_intron MGP_WSBEiJ_T0060516.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87728380 87731304 + Smg5 protein_coding processed_transcript MGP_WSBEiJ_T0060517.1 MGP_WSBEiJ_G0026633.1 mouse_genomes_project 3 87730569 87731125 + Smg5 protein_coding retained_intron MGP_WSBEiJ_T0061007.1 MGP_WSBEiJ_G0026718.1 mouse_genomes_project 3 90219780 90222107 + MGP_WSBEiJ_P0061007 S100a4 protein_coding protein_coding MGP_WSBEiJ_T0061008.1 MGP_WSBEiJ_G0026718.1 mouse_genomes_project 3 90220974 90221897 + MGP_WSBEiJ_P0061008 S100a4 protein_coding protein_coding MGP_WSBEiJ_T0060526.1 MGP_WSBEiJ_G0026636.1 mouse_genomes_project 3 87754533 87755396 - MGP_WSBEiJ_P0060526 protein_coding protein_coding MGP_WSBEiJ_T0099466.1 MGP_WSBEiJ_G0038129.1 mouse_genomes_project 3 113182367 113182493 - Gm25519 snoRNA snoRNA MGP_WSBEiJ_T0007432.1 MGP_WSBEiJ_G0006091.1 mouse_genomes_project 3 52790287 52793469 + Gm26678 lincRNA lincRNA MGP_WSBEiJ_T0061951.1 MGP_WSBEiJ_G0026971.1 mouse_genomes_project 3 107201803 107207985 + Dennd2d protein_coding processed_transcript MGP_WSBEiJ_T0061952.1 MGP_WSBEiJ_G0026971.1 mouse_genomes_project 3 107201829 107222356 + MGP_WSBEiJ_P0061952 Dennd2d protein_coding protein_coding MGP_WSBEiJ_T0061953.1 MGP_WSBEiJ_G0026971.1 mouse_genomes_project 3 107201848 107208003 + MGP_WSBEiJ_P0061953 Dennd2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061954.1 MGP_WSBEiJ_G0026971.1 mouse_genomes_project 3 107205447 107220370 + MGP_WSBEiJ_P0061954 Dennd2d protein_coding protein_coding MGP_WSBEiJ_T0061955.1 MGP_WSBEiJ_G0026971.1 mouse_genomes_project 3 107206815 107208039 + Dennd2d protein_coding retained_intron MGP_WSBEiJ_T0061956.1 MGP_WSBEiJ_G0026971.1 mouse_genomes_project 3 107212569 107214680 + Dennd2d protein_coding retained_intron MGP_WSBEiJ_T0001342.1 MGP_WSBEiJ_G0001271.1 mouse_genomes_project 3 154659422 154662874 + TEC TEC MGP_WSBEiJ_T0098147.1 MGP_WSBEiJ_G0036810.1 mouse_genomes_project 3 15225106 15225270 - Gm23686 snRNA snRNA MGP_WSBEiJ_T0063257.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155198403 155248202 + MGP_WSBEiJ_P0063257 Usp33 protein_coding protein_coding MGP_WSBEiJ_T0063258.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155198403 155248481 + MGP_WSBEiJ_P0063258 Usp33 protein_coding protein_coding MGP_WSBEiJ_T0063259.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155198414 155248486 + MGP_WSBEiJ_P0063259 Usp33 protein_coding protein_coding MGP_WSBEiJ_T0063260.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155198437 155226303 + MGP_WSBEiJ_P0063260 Usp33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063261.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155198440 155212774 + Usp33 protein_coding retained_intron MGP_WSBEiJ_T0063262.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155216325 155222889 + Usp33 protein_coding processed_transcript MGP_WSBEiJ_T0063263.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155218298 155221554 + Usp33 protein_coding retained_intron MGP_WSBEiJ_T0063264.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155220673 155228019 + Usp33 protein_coding retained_intron MGP_WSBEiJ_T0063265.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155222827 155229385 + MGP_WSBEiJ_P0063265 Usp33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063266.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155236441 155247376 + Usp33 protein_coding processed_transcript MGP_WSBEiJ_T0063267.1 MGP_WSBEiJ_G0027225.1 mouse_genomes_project 3 155236929 155238648 + Usp33 protein_coding retained_intron MGP_WSBEiJ_T0059275.1 MGP_WSBEiJ_G0026374.1 mouse_genomes_project 3 28573522 28593784 + MGP_WSBEiJ_P0059275 Cldn11 protein_coding protein_coding MGP_WSBEiJ_T0059953.1 MGP_WSBEiJ_G0026503.1 mouse_genomes_project 3 61656399 61748095 + MGP_WSBEiJ_P0059953 Mme protein_coding protein_coding MGP_WSBEiJ_T0059954.1 MGP_WSBEiJ_G0026503.1 mouse_genomes_project 3 61715681 61748464 + MGP_WSBEiJ_P0059954 Mme protein_coding protein_coding MGP_WSBEiJ_T0059955.1 MGP_WSBEiJ_G0026503.1 mouse_genomes_project 3 61715863 61748456 + MGP_WSBEiJ_P0059955 Mme protein_coding protein_coding MGP_WSBEiJ_T0059956.1 MGP_WSBEiJ_G0026503.1 mouse_genomes_project 3 61715976 61803842 + MGP_WSBEiJ_P0059956 Mme protein_coding protein_coding MGP_WSBEiJ_T0059957.1 MGP_WSBEiJ_G0026503.1 mouse_genomes_project 3 61716287 61810630 + MGP_WSBEiJ_P0059957 Mme protein_coding protein_coding MGP_WSBEiJ_T0059958.1 MGP_WSBEiJ_G0026503.1 mouse_genomes_project 3 61716510 61804369 + MGP_WSBEiJ_P0059958 Mme protein_coding protein_coding MGP_WSBEiJ_T0059959.1 MGP_WSBEiJ_G0026503.1 mouse_genomes_project 3 61717467 61748336 + MGP_WSBEiJ_P0059959 Mme protein_coding protein_coding MGP_WSBEiJ_T0059960.1 MGP_WSBEiJ_G0026503.1 mouse_genomes_project 3 61720573 61766407 + Mme protein_coding retained_intron MGP_WSBEiJ_T0013988.1 MGP_WSBEiJ_G0012118.1 mouse_genomes_project 3 162508164 162508386 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013783.1 MGP_WSBEiJ_G0011913.1 mouse_genomes_project 3 88581958 88582211 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017411.1 MGP_WSBEiJ_G0014944.1 mouse_genomes_project 3 123724955 123734464 - processed_transcript retained_intron MGP_WSBEiJ_T0097046.1 MGP_WSBEiJ_G0035727.1 mouse_genomes_project 3 96536208 96536325 + Gm28001 rRNA rRNA MGP_WSBEiJ_T0013603.1 MGP_WSBEiJ_G0011733.1 mouse_genomes_project 3 28384819 28385282 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061465.1 MGP_WSBEiJ_G0026849.1 mouse_genomes_project 3 96236067 96238067 - MGP_WSBEiJ_P0061465 Hist2h2aa1 protein_coding protein_coding MGP_WSBEiJ_T0100273.1 MGP_WSBEiJ_G0038792.1 mouse_genomes_project 3 58002269 58143101 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100274.1 MGP_WSBEiJ_G0038792.1 mouse_genomes_project 3 58060823 58134280 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0060302.1 MGP_WSBEiJ_G0026585.1 mouse_genomes_project 3 83692062 83783810 - MGP_WSBEiJ_P0060302 Arfip1 protein_coding protein_coding MGP_WSBEiJ_T0060304.1 MGP_WSBEiJ_G0026585.1 mouse_genomes_project 3 83693173 83783761 - MGP_WSBEiJ_P0060304 Arfip1 protein_coding protein_coding MGP_WSBEiJ_T0060305.1 MGP_WSBEiJ_G0026585.1 mouse_genomes_project 3 83693705 83783901 - MGP_WSBEiJ_P0060305 Arfip1 protein_coding protein_coding MGP_WSBEiJ_T0062337.1 MGP_WSBEiJ_G0027058.1 mouse_genomes_project 3 118164787 118180403 + MGP_WSBEiJ_P0062337 4930455H04Rik protein_coding protein_coding MGP_WSBEiJ_T0001149.1 MGP_WSBEiJ_G0001081.1 mouse_genomes_project 3 48893221 48895874 - TEC TEC MGP_WSBEiJ_T0017383.1 MGP_WSBEiJ_G0014935.1 mouse_genomes_project 3 100792479 100794940 + 4930406D18Rik processed_transcript retained_intron MGP_WSBEiJ_T0017384.1 MGP_WSBEiJ_G0014935.1 mouse_genomes_project 3 100792513 100802934 + 4930406D18Rik processed_transcript lincRNA MGP_WSBEiJ_T0060092.1 MGP_WSBEiJ_G0026534.1 mouse_genomes_project 3 67685207 67695300 - MGP_WSBEiJ_P0060092 Trim59 protein_coding protein_coding MGP_WSBEiJ_T0060093.1 MGP_WSBEiJ_G0026534.1 mouse_genomes_project 3 67686756 67695260 - MGP_WSBEiJ_P0060093 Trim59 protein_coding protein_coding MGP_WSBEiJ_T0060094.1 MGP_WSBEiJ_G0026534.1 mouse_genomes_project 3 67694070 67695260 - Trim59 protein_coding retained_intron MGP_WSBEiJ_T0060095.1 MGP_WSBEiJ_G0026534.1 mouse_genomes_project 3 67694297 67695268 - Trim59 protein_coding processed_transcript MGP_WSBEiJ_T0007606.1 MGP_WSBEiJ_G0006226.1 mouse_genomes_project 3 139940085 139940542 - Gm43689 lincRNA lincRNA MGP_WSBEiJ_T0001108.1 MGP_WSBEiJ_G0001040.1 mouse_genomes_project 3 31445001 31445949 + TEC TEC MGP_WSBEiJ_T0013518.1 MGP_WSBEiJ_G0011648.1 mouse_genomes_project 3 664873 665192 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062006.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108207794 108259338 - MGP_WSBEiJ_P0062006 Slc6a17 protein_coding protein_coding MGP_WSBEiJ_T0062007.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108207799 108259338 - MGP_WSBEiJ_P0062007 Slc6a17 protein_coding protein_coding MGP_WSBEiJ_T0062008.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108207800 108241825 - MGP_WSBEiJ_P0062008 Slc6a17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062009.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108207802 108208957 - Slc6a17 protein_coding processed_transcript MGP_WSBEiJ_T0062010.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108223264 108259069 - Slc6a17 protein_coding processed_transcript MGP_WSBEiJ_T0062011.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108231064 108234490 - Slc6a17 protein_coding processed_transcript MGP_WSBEiJ_T0062012.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108231066 108259338 - Slc6a17 protein_coding retained_intron MGP_WSBEiJ_T0062013.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108237009 108259265 - Slc6a17 protein_coding processed_transcript MGP_WSBEiJ_T0062014.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108237055 108258657 - MGP_WSBEiJ_P0062014 Slc6a17 protein_coding protein_coding MGP_WSBEiJ_T0062015.1 MGP_WSBEiJ_G0026987.1 mouse_genomes_project 3 108241965 108258647 - Slc6a17 protein_coding processed_transcript MGP_WSBEiJ_T0060146.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74772970 74861600 - MGP_WSBEiJ_P0060146 Golim4 protein_coding protein_coding MGP_WSBEiJ_T0060147.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74774069 74861620 - MGP_WSBEiJ_P0060147 Golim4 protein_coding protein_coding MGP_WSBEiJ_T0060148.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74774365 74778174 - Golim4 protein_coding retained_intron MGP_WSBEiJ_T0060149.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74775545 74861608 - MGP_WSBEiJ_P0060149 Golim4 protein_coding protein_coding MGP_WSBEiJ_T0060150.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74785913 74792321 - Golim4 protein_coding retained_intron MGP_WSBEiJ_T0060151.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74794018 74801613 - MGP_WSBEiJ_P0060151 Golim4 protein_coding protein_coding MGP_WSBEiJ_T0060152.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74798396 74861579 - Golim4 protein_coding retained_intron MGP_WSBEiJ_T0060153.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74809094 74861321 - Golim4 protein_coding retained_intron MGP_WSBEiJ_T0060154.1 MGP_WSBEiJ_G0026550.1 mouse_genomes_project 3 74859786 74861602 - Golim4 protein_coding retained_intron MGP_WSBEiJ_T0058923.1 MGP_WSBEiJ_G0026290.1 mouse_genomes_project 3 3379539 3385387 - MGP_WSBEiJ_P0058923 1700008P02Rik protein_coding protein_coding MGP_WSBEiJ_T0063095.1 MGP_WSBEiJ_G0027200.1 mouse_genomes_project 3 148561158 148630454 - MGP_WSBEiJ_P0063095 Wdr63 protein_coding protein_coding MGP_WSBEiJ_T0063096.1 MGP_WSBEiJ_G0027200.1 mouse_genomes_project 3 148561160 148568738 - Wdr63 protein_coding processed_transcript MGP_WSBEiJ_T0063097.1 MGP_WSBEiJ_G0027200.1 mouse_genomes_project 3 148563412 148569990 - Wdr63 protein_coding processed_transcript MGP_WSBEiJ_T0061862.1 MGP_WSBEiJ_G0026946.1 mouse_genomes_project 3 105373109 105384216 - MGP_WSBEiJ_P0061862 Fam19a3 protein_coding protein_coding MGP_WSBEiJ_T0061863.1 MGP_WSBEiJ_G0026946.1 mouse_genomes_project 3 105384029 105388509 - Fam19a3 protein_coding processed_transcript MGP_WSBEiJ_T0097345.1 MGP_WSBEiJ_G0036019.1 mouse_genomes_project 3 102018793 102019545 - Gm42937 sense_intronic sense_intronic MGP_WSBEiJ_T0062698.1 MGP_WSBEiJ_G0027120.1 mouse_genomes_project 3 132949669 133075301 + MGP_WSBEiJ_P0062698 Lef1 protein_coding protein_coding MGP_WSBEiJ_T0062699.1 MGP_WSBEiJ_G0027120.1 mouse_genomes_project 3 132949669 133075301 + MGP_WSBEiJ_P0062699 Lef1 protein_coding protein_coding MGP_WSBEiJ_T0062700.1 MGP_WSBEiJ_G0027120.1 mouse_genomes_project 3 132949669 133075301 + MGP_WSBEiJ_P0062700 Lef1 protein_coding protein_coding MGP_WSBEiJ_T0062701.1 MGP_WSBEiJ_G0027120.1 mouse_genomes_project 3 132952009 132957110 + Lef1 protein_coding retained_intron MGP_WSBEiJ_T0062702.1 MGP_WSBEiJ_G0027120.1 mouse_genomes_project 3 132952009 133075301 + MGP_WSBEiJ_P0062702 Lef1 protein_coding protein_coding MGP_WSBEiJ_T0062703.1 MGP_WSBEiJ_G0027120.1 mouse_genomes_project 3 132952018 133036626 + Lef1 protein_coding retained_intron MGP_WSBEiJ_T0062704.1 MGP_WSBEiJ_G0027120.1 mouse_genomes_project 3 132953028 133033288 + Lef1 protein_coding retained_intron MGP_WSBEiJ_T0062705.1 MGP_WSBEiJ_G0027120.1 mouse_genomes_project 3 132953070 133053256 + Lef1 protein_coding processed_transcript MGP_WSBEiJ_T0097325.1 MGP_WSBEiJ_G0036000.1 mouse_genomes_project 3 78593407 78594254 - Gm3513 sense_intronic sense_intronic MGP_WSBEiJ_T0013974.1 MGP_WSBEiJ_G0012104.1 mouse_genomes_project 3 151862933 151863392 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017398.1 MGP_WSBEiJ_G0014942.1 mouse_genomes_project 3 117007577 117014767 - A930005H10Rik processed_transcript antisense MGP_WSBEiJ_T0017399.1 MGP_WSBEiJ_G0014942.1 mouse_genomes_project 3 117007577 117014803 - A930005H10Rik processed_transcript antisense MGP_WSBEiJ_T0017400.1 MGP_WSBEiJ_G0014942.1 mouse_genomes_project 3 117007579 117014626 - A930005H10Rik processed_transcript antisense MGP_WSBEiJ_T0017401.1 MGP_WSBEiJ_G0014942.1 mouse_genomes_project 3 117007782 117014777 - A930005H10Rik processed_transcript antisense MGP_WSBEiJ_T0017402.1 MGP_WSBEiJ_G0014942.1 mouse_genomes_project 3 117012668 117014770 - A930005H10Rik processed_transcript retained_intron MGP_WSBEiJ_T0017403.1 MGP_WSBEiJ_G0014942.1 mouse_genomes_project 3 117012767 117014561 - A930005H10Rik processed_transcript retained_intron MGP_WSBEiJ_T0017404.1 MGP_WSBEiJ_G0014942.1 mouse_genomes_project 3 117014495 117014803 - A930005H10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0061105.1 MGP_WSBEiJ_G0026785.1 mouse_genomes_project 3 94202708 94208674 + MGP_WSBEiJ_P0061105 Lingo4 protein_coding protein_coding MGP_WSBEiJ_T0001097.1 MGP_WSBEiJ_G0001029.1 mouse_genomes_project 3 27882069 27882935 + TEC TEC MGP_WSBEiJ_T0013768.1 MGP_WSBEiJ_G0011898.1 mouse_genomes_project 3 81791949 81792529 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062489.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125052087 125201500 - MGP_WSBEiJ_P0062489 Ndst3 protein_coding protein_coding MGP_WSBEiJ_T0062490.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125052093 125219527 - MGP_WSBEiJ_P0062490 Ndst3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062491.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125052095 125219527 - MGP_WSBEiJ_P0062491 Ndst3 protein_coding protein_coding MGP_WSBEiJ_T0062492.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125052096 125201584 - MGP_WSBEiJ_P0062492 Ndst3 protein_coding protein_coding MGP_WSBEiJ_T0062493.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125054486 125146668 - MGP_WSBEiJ_P0062493 Ndst3 protein_coding protein_coding MGP_WSBEiJ_T0062494.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125054615 125218954 - MGP_WSBEiJ_P0062494 Ndst3 protein_coding protein_coding MGP_WSBEiJ_T0062495.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125079986 125201769 - Ndst3 protein_coding retained_intron MGP_WSBEiJ_T0062496.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125084058 125087529 - Ndst3 protein_coding retained_intron MGP_WSBEiJ_T0062497.1 MGP_WSBEiJ_G0027087.1 mouse_genomes_project 3 125084229 125102655 - Ndst3 protein_coding processed_transcript MGP_WSBEiJ_T0013707.1 MGP_WSBEiJ_G0011837.1 mouse_genomes_project 3 60480316 60482563 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004268.1 MGP_WSBEiJ_G0003730.1 mouse_genomes_project 3 109061914 109062856 - Gm12523 antisense antisense MGP_WSBEiJ_T0013551.1 MGP_WSBEiJ_G0011681.1 mouse_genomes_project 3 9898043 9898386 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001277.1 MGP_WSBEiJ_G0001207.1 mouse_genomes_project 3 124666444 124667044 - TEC TEC MGP_WSBEiJ_T0098212.1 MGP_WSBEiJ_G0036875.1 mouse_genomes_project 3 124909884 124910014 - Gm22713 snRNA snRNA MGP_WSBEiJ_T0061199.1 MGP_WSBEiJ_G0026799.1 mouse_genomes_project 3 94887420 94920867 + MGP_WSBEiJ_P0061199 Pi4kb protein_coding protein_coding MGP_WSBEiJ_T0061200.1 MGP_WSBEiJ_G0026799.1 mouse_genomes_project 3 94887520 94920179 + MGP_WSBEiJ_P0061200 Pi4kb protein_coding protein_coding MGP_WSBEiJ_T0061201.1 MGP_WSBEiJ_G0026799.1 mouse_genomes_project 3 94887565 94920175 + MGP_WSBEiJ_P0061201 Pi4kb protein_coding protein_coding MGP_WSBEiJ_T0061202.1 MGP_WSBEiJ_G0026799.1 mouse_genomes_project 3 94888805 94920805 + MGP_WSBEiJ_P0061202 Pi4kb protein_coding protein_coding MGP_WSBEiJ_T0061203.1 MGP_WSBEiJ_G0026799.1 mouse_genomes_project 3 94888832 94908672 + MGP_WSBEiJ_P0061203 Pi4kb protein_coding protein_coding MGP_WSBEiJ_T0061204.1 MGP_WSBEiJ_G0026799.1 mouse_genomes_project 3 94911656 94920208 + MGP_WSBEiJ_P0061204 Pi4kb protein_coding protein_coding MGP_WSBEiJ_T0061205.1 MGP_WSBEiJ_G0026799.1 mouse_genomes_project 3 94918342 94920276 + Pi4kb protein_coding processed_transcript MGP_WSBEiJ_T0060481.1 MGP_WSBEiJ_G0026628.1 mouse_genomes_project 3 87605371 87654666 - MGP_WSBEiJ_P0060481 Gm38392 protein_coding protein_coding MGP_WSBEiJ_T0060482.1 MGP_WSBEiJ_G0026628.1 mouse_genomes_project 3 87607186 87654666 - MGP_WSBEiJ_P0060482 Gm38392 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097211.1 MGP_WSBEiJ_G0035892.1 mouse_genomes_project 3 88093376 88093504 + Gm25820 scaRNA scaRNA MGP_WSBEiJ_T0001276.1 MGP_WSBEiJ_G0001206.1 mouse_genomes_project 3 124488217 124491864 + TEC TEC MGP_WSBEiJ_T0013943.1 MGP_WSBEiJ_G0012073.1 mouse_genomes_project 3 139927563 139927921 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001284.1 MGP_WSBEiJ_G0001214.1 mouse_genomes_project 3 128021296 128026158 + TEC TEC MGP_WSBEiJ_T0098158.1 MGP_WSBEiJ_G0036821.1 mouse_genomes_project 3 51927548 51927651 + Gm24851 snRNA snRNA MGP_WSBEiJ_T0063098.1 MGP_WSBEiJ_G0027201.1 mouse_genomes_project 3 148640841 148648089 + MGP_WSBEiJ_P0063098 Mcoln3 protein_coding protein_coding MGP_WSBEiJ_T0063099.1 MGP_WSBEiJ_G0027201.1 mouse_genomes_project 3 148645055 148666934 + MGP_WSBEiJ_P0063099 Mcoln3 protein_coding protein_coding MGP_WSBEiJ_T0063100.1 MGP_WSBEiJ_G0027201.1 mouse_genomes_project 3 148664207 148665791 + Mcoln3 protein_coding retained_intron MGP_WSBEiJ_T0062918.1 MGP_WSBEiJ_G0027165.1 mouse_genomes_project 3 140510257 140522533 + MGP_WSBEiJ_P0062918 Adh5 protein_coding protein_coding MGP_WSBEiJ_T0062919.1 MGP_WSBEiJ_G0027165.1 mouse_genomes_project 3 140510275 140513120 + Adh5 protein_coding retained_intron MGP_WSBEiJ_T0062920.1 MGP_WSBEiJ_G0027165.1 mouse_genomes_project 3 140510276 140514008 + Adh5 protein_coding retained_intron MGP_WSBEiJ_T0062921.1 MGP_WSBEiJ_G0027165.1 mouse_genomes_project 3 140510334 140512575 + Adh5 protein_coding retained_intron MGP_WSBEiJ_T0062922.1 MGP_WSBEiJ_G0027165.1 mouse_genomes_project 3 140510334 140515111 + MGP_WSBEiJ_P0062922 Adh5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062923.1 MGP_WSBEiJ_G0027165.1 mouse_genomes_project 3 140510345 140521837 + MGP_WSBEiJ_P0062923 Adh5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062924.1 MGP_WSBEiJ_G0027165.1 mouse_genomes_project 3 140521438 140522277 + Adh5 protein_coding retained_intron MGP_WSBEiJ_T0097377.1 MGP_WSBEiJ_G0036051.1 mouse_genomes_project 3 106399319 106402556 - Gm43329 sense_intronic sense_intronic MGP_WSBEiJ_T0098167.1 MGP_WSBEiJ_G0036830.1 mouse_genomes_project 3 62208192 62208290 + Gm23500 snRNA snRNA MGP_WSBEiJ_T0001363.1 MGP_WSBEiJ_G0001292.1 mouse_genomes_project 3 161074789 161077266 - TEC TEC MGP_WSBEiJ_T0099475.1 MGP_WSBEiJ_G0038138.1 mouse_genomes_project 3 128617033 128617165 + Gm25501 snoRNA snoRNA MGP_WSBEiJ_T0099471.1 MGP_WSBEiJ_G0038134.1 mouse_genomes_project 3 120963534 120963665 - Gm23432 snoRNA snoRNA MGP_WSBEiJ_T0001132.1 MGP_WSBEiJ_G0001064.1 mouse_genomes_project 3 39317343 39319580 - TEC TEC MGP_WSBEiJ_T0001213.1 MGP_WSBEiJ_G0001143.1 mouse_genomes_project 3 74856792 74858973 + TEC TEC MGP_WSBEiJ_T0099433.1 MGP_WSBEiJ_G0038096.1 mouse_genomes_project 3 54160163 54160295 - Gm22784 snoRNA snoRNA MGP_WSBEiJ_T0061043.1 MGP_WSBEiJ_G0026742.1 mouse_genomes_project 3 92187417 92189393 - MGP_WSBEiJ_P0061043 Sprr1b protein_coding protein_coding MGP_WSBEiJ_T0007370.1 MGP_WSBEiJ_G0006042.1 mouse_genomes_project 3 26097611 26100153 - Gm32950 lincRNA lincRNA MGP_WSBEiJ_T0013880.1 MGP_WSBEiJ_G0012010.1 mouse_genomes_project 3 117056869 117058034 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004296.1 MGP_WSBEiJ_G0003753.1 mouse_genomes_project 3 131515808 131530006 + 6330410L21Rik antisense antisense MGP_WSBEiJ_T0062839.1 MGP_WSBEiJ_G0027145.1 mouse_genomes_project 3 137737033 137810785 + MGP_WSBEiJ_P0062839 Slc39a8 protein_coding protein_coding MGP_WSBEiJ_T0062840.1 MGP_WSBEiJ_G0027145.1 mouse_genomes_project 3 137737408 137777139 + Slc39a8 protein_coding retained_intron MGP_WSBEiJ_T0062841.1 MGP_WSBEiJ_G0027145.1 mouse_genomes_project 3 137737411 137810964 + MGP_WSBEiJ_P0062841 Slc39a8 protein_coding protein_coding MGP_WSBEiJ_T0062842.1 MGP_WSBEiJ_G0027145.1 mouse_genomes_project 3 137738242 137810964 + MGP_WSBEiJ_P0062842 Slc39a8 protein_coding protein_coding MGP_WSBEiJ_T0062843.1 MGP_WSBEiJ_G0027145.1 mouse_genomes_project 3 137738542 137810777 + MGP_WSBEiJ_P0062843 Slc39a8 protein_coding protein_coding MGP_WSBEiJ_T0062844.1 MGP_WSBEiJ_G0027145.1 mouse_genomes_project 3 137806527 137810960 + Slc39a8 protein_coding retained_intron MGP_WSBEiJ_T0013927.1 MGP_WSBEiJ_G0012057.1 mouse_genomes_project 3 136236811 136237310 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011329.1 MGP_WSBEiJ_G0009486.1 mouse_genomes_project 3 6242399 6242708 + Gm22604 misc_RNA misc_RNA MGP_WSBEiJ_T0062652.1 MGP_WSBEiJ_G0027111.1 mouse_genomes_project 3 131606223 131622306 + MGP_WSBEiJ_P0062652 Cfi protein_coding protein_coding MGP_WSBEiJ_T0062653.1 MGP_WSBEiJ_G0027111.1 mouse_genomes_project 3 131607051 131649501 + MGP_WSBEiJ_P0062653 Cfi protein_coding protein_coding MGP_WSBEiJ_T0061911.1 MGP_WSBEiJ_G0026959.1 mouse_genomes_project 3 106509229 106547835 + MGP_WSBEiJ_P0061911 Adora3 protein_coding protein_coding MGP_WSBEiJ_T0061916.1 MGP_WSBEiJ_G0026959.1 mouse_genomes_project 3 106543886 106548407 + MGP_WSBEiJ_P0061916 Adora3 protein_coding protein_coding MGP_WSBEiJ_T0061918.1 MGP_WSBEiJ_G0026959.1 mouse_genomes_project 3 106544160 106545833 + Adora3 protein_coding retained_intron MGP_WSBEiJ_T0013841.1 MGP_WSBEiJ_G0011971.1 mouse_genomes_project 3 103746428 103746717 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010352.1 MGP_WSBEiJ_G0008509.1 mouse_genomes_project 3 87577235 87577322 + Mir3093 miRNA miRNA MGP_WSBEiJ_T0062261.1 MGP_WSBEiJ_G0027043.1 mouse_genomes_project 3 117124441 117125453 + Extl2 protein_coding processed_transcript MGP_WSBEiJ_T0062262.1 MGP_WSBEiJ_G0027043.1 mouse_genomes_project 3 117124443 117153565 + MGP_WSBEiJ_P0062262 Extl2 protein_coding protein_coding MGP_WSBEiJ_T0062263.1 MGP_WSBEiJ_G0027043.1 mouse_genomes_project 3 117124479 117141044 + Extl2 protein_coding processed_transcript MGP_WSBEiJ_T0062264.1 MGP_WSBEiJ_G0027043.1 mouse_genomes_project 3 117124784 117127822 + Extl2 protein_coding processed_transcript MGP_WSBEiJ_T0007504.1 MGP_WSBEiJ_G0006141.1 mouse_genomes_project 3 94615620 94628342 + lincRNA lincRNA MGP_WSBEiJ_T0013840.1 MGP_WSBEiJ_G0011970.1 mouse_genomes_project 3 103674806 103675561 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013678.1 MGP_WSBEiJ_G0011808.1 mouse_genomes_project 3 51413926 51414664 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013983.1 MGP_WSBEiJ_G0012113.1 mouse_genomes_project 3 159058956 159060792 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013623.1 MGP_WSBEiJ_G0011753.1 mouse_genomes_project 3 35081162 35086712 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001246.1 MGP_WSBEiJ_G0001176.1 mouse_genomes_project 3 105297640 105302867 + TEC TEC MGP_WSBEiJ_T0013767.1 MGP_WSBEiJ_G0011897.1 mouse_genomes_project 3 81698615 81699114 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061626.1 MGP_WSBEiJ_G0026897.1 mouse_genomes_project 3 99168071 99180690 - MGP_WSBEiJ_P0061626 protein_coding protein_coding MGP_WSBEiJ_T0061627.1 MGP_WSBEiJ_G0026897.1 mouse_genomes_project 3 99168073 99180690 - MGP_WSBEiJ_P0061627 protein_coding protein_coding MGP_WSBEiJ_T0061685.1 MGP_WSBEiJ_G0026914.1 mouse_genomes_project 3 102267128 102292321 - MGP_WSBEiJ_P0061685 Mab21l3 protein_coding protein_coding MGP_WSBEiJ_T0061686.1 MGP_WSBEiJ_G0026914.1 mouse_genomes_project 3 102267735 102307311 - MGP_WSBEiJ_P0061686 Mab21l3 protein_coding protein_coding MGP_WSBEiJ_T0007552.1 MGP_WSBEiJ_G0006182.1 mouse_genomes_project 3 117333635 117335941 + Gm43202 lincRNA lincRNA MGP_WSBEiJ_T0013681.1 MGP_WSBEiJ_G0011811.1 mouse_genomes_project 3 52791728 52793410 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004170.1 MGP_WSBEiJ_G0003670.1 mouse_genomes_project 3 59377249 59379397 - Gm37035 antisense antisense MGP_WSBEiJ_T0100752.1 MGP_WSBEiJ_G0039210.1 mouse_genomes_project 3 263243 263671 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013790.1 MGP_WSBEiJ_G0011920.1 mouse_genomes_project 3 92066765 92066902 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099444.1 MGP_WSBEiJ_G0038107.1 mouse_genomes_project 3 80981110 80981250 + Gm22531 snoRNA snoRNA MGP_WSBEiJ_T0007425.1 MGP_WSBEiJ_G0006085.1 mouse_genomes_project 3 50574805 50608735 + Gm30173 lincRNA lincRNA MGP_WSBEiJ_T0010329.1 MGP_WSBEiJ_G0008486.1 mouse_genomes_project 3 23810358 23810485 - Gm25773 miRNA miRNA MGP_WSBEiJ_T0060096.1 MGP_WSBEiJ_G0026535.1 mouse_genomes_project 3 67717623 67779115 - MGP_WSBEiJ_P0060096 Kpna4 protein_coding protein_coding MGP_WSBEiJ_T0060097.1 MGP_WSBEiJ_G0026535.1 mouse_genomes_project 3 67722695 67779094 - MGP_WSBEiJ_P0060097 Kpna4 protein_coding protein_coding MGP_WSBEiJ_T0060098.1 MGP_WSBEiJ_G0026535.1 mouse_genomes_project 3 67745915 67778632 - MGP_WSBEiJ_P0060098 Kpna4 protein_coding protein_coding MGP_WSBEiJ_T0060554.1 MGP_WSBEiJ_G0026641.1 mouse_genomes_project 3 87868949 87873422 - Lmna protein_coding retained_intron MGP_WSBEiJ_T0060555.1 MGP_WSBEiJ_G0026641.1 mouse_genomes_project 3 87869950 87893580 - MGP_WSBEiJ_P0060555 Lmna protein_coding protein_coding MGP_WSBEiJ_T0060556.1 MGP_WSBEiJ_G0026641.1 mouse_genomes_project 3 87870648 87893582 - Lmna protein_coding processed_transcript MGP_WSBEiJ_T0060557.1 MGP_WSBEiJ_G0026641.1 mouse_genomes_project 3 87870879 87871667 - Lmna protein_coding retained_intron MGP_WSBEiJ_T0060558.1 MGP_WSBEiJ_G0026641.1 mouse_genomes_project 3 87872007 87893552 - MGP_WSBEiJ_P0060558 Lmna protein_coding protein_coding MGP_WSBEiJ_T0060559.1 MGP_WSBEiJ_G0026641.1 mouse_genomes_project 3 87872008 87881973 - MGP_WSBEiJ_P0060559 Lmna protein_coding protein_coding MGP_WSBEiJ_T0060560.1 MGP_WSBEiJ_G0026641.1 mouse_genomes_project 3 87892997 87901274 - MGP_WSBEiJ_P0060560 Lmna protein_coding protein_coding MGP_WSBEiJ_T0004236.1 MGP_WSBEiJ_G0003716.1 mouse_genomes_project 3 101854183 101855222 - Gm42538 antisense antisense MGP_WSBEiJ_T0004237.1 MGP_WSBEiJ_G0003716.1 mouse_genomes_project 3 101854842 101856513 - Gm42538 antisense antisense MGP_WSBEiJ_T0001347.1 MGP_WSBEiJ_G0001276.1 mouse_genomes_project 3 155240691 155242469 + TEC TEC MGP_WSBEiJ_T0013929.1 MGP_WSBEiJ_G0012059.1 mouse_genomes_project 3 136844226 136845205 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001093.1 MGP_WSBEiJ_G0001025.1 mouse_genomes_project 3 27537098 27538732 - TEC TEC MGP_WSBEiJ_T0004305.1 MGP_WSBEiJ_G0003759.1 mouse_genomes_project 3 137826716 137858588 + antisense antisense MGP_WSBEiJ_T0004306.1 MGP_WSBEiJ_G0003759.1 mouse_genomes_project 3 137857824 138114278 + antisense antisense MGP_WSBEiJ_T0059517.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35087070 35245875 + MGP_WSBEiJ_P0059517 Spata5 protein_coding protein_coding MGP_WSBEiJ_T0059518.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35087482 35245875 + MGP_WSBEiJ_P0059518 Spata5 protein_coding protein_coding MGP_WSBEiJ_T0059519.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35087496 35245875 + MGP_WSBEiJ_P0059519 Spata5 protein_coding protein_coding MGP_WSBEiJ_T0059520.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35087557 35093710 + Spata5 protein_coding processed_transcript MGP_WSBEiJ_T0059521.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35088036 35094472 + Spata5 protein_coding processed_transcript MGP_WSBEiJ_T0059522.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35100404 35107657 + Spata5 protein_coding processed_transcript MGP_WSBEiJ_T0059523.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35105071 35107777 + Spata5 protein_coding retained_intron MGP_WSBEiJ_T0059524.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35120008 35200925 + Spata5 protein_coding retained_intron MGP_WSBEiJ_T0059525.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35162898 35245788 + Spata5 protein_coding processed_transcript MGP_WSBEiJ_T0059526.1 MGP_WSBEiJ_G0026414.1 mouse_genomes_project 3 35240474 35245869 + Spata5 protein_coding processed_transcript MGP_WSBEiJ_T0063003.1 MGP_WSBEiJ_G0027181.1 mouse_genomes_project 3 145056856 145076509 + MGP_WSBEiJ_P0063003 Gtf2b protein_coding protein_coding MGP_WSBEiJ_T0063004.1 MGP_WSBEiJ_G0027181.1 mouse_genomes_project 3 145057034 145060237 + Gtf2b protein_coding retained_intron MGP_WSBEiJ_T0001325.1 MGP_WSBEiJ_G0001254.1 mouse_genomes_project 3 137308174 137310890 - TEC TEC MGP_WSBEiJ_T0013866.1 MGP_WSBEiJ_G0011996.1 mouse_genomes_project 3 112754330 112754724 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099457.1 MGP_WSBEiJ_G0038120.1 mouse_genomes_project 3 96172365 96172492 + Gm22027 snoRNA snoRNA MGP_WSBEiJ_T0059907.1 MGP_WSBEiJ_G0026491.1 mouse_genomes_project 3 58170764 58187852 + protein_coding unprocessed_pseudogene MGP_WSBEiJ_T0062741.1 MGP_WSBEiJ_G0027130.1 mouse_genomes_project 3 134825302 134936997 - MGP_WSBEiJ_P0062741 Gstcd protein_coding protein_coding MGP_WSBEiJ_T0062742.1 MGP_WSBEiJ_G0027130.1 mouse_genomes_project 3 134826317 134937205 - MGP_WSBEiJ_P0062742 Gstcd protein_coding protein_coding MGP_WSBEiJ_T0062743.1 MGP_WSBEiJ_G0027130.1 mouse_genomes_project 3 134839718 134849294 - Gstcd protein_coding retained_intron MGP_WSBEiJ_T0062744.1 MGP_WSBEiJ_G0027130.1 mouse_genomes_project 3 134842396 134936919 - Gstcd protein_coding processed_transcript MGP_WSBEiJ_T0062745.1 MGP_WSBEiJ_G0027130.1 mouse_genomes_project 3 134926461 134936950 - Gstcd protein_coding retained_intron MGP_WSBEiJ_T0062746.1 MGP_WSBEiJ_G0027130.1 mouse_genomes_project 3 134926656 134928310 - Gstcd protein_coding retained_intron MGP_WSBEiJ_T0013587.1 MGP_WSBEiJ_G0011717.1 mouse_genomes_project 3 19125418 19125851 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001114.1 MGP_WSBEiJ_G0001046.1 mouse_genomes_project 3 33444524 33445083 + TEC TEC MGP_WSBEiJ_T0061484.1 MGP_WSBEiJ_G0026859.1 mouse_genomes_project 3 96647903 96652340 + MGP_WSBEiJ_P0061484 Ankrd34a protein_coding protein_coding MGP_WSBEiJ_T0013869.1 MGP_WSBEiJ_G0011999.1 mouse_genomes_project 3 113320289 113321151 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059997.1 MGP_WSBEiJ_G0026515.1 mouse_genomes_project 3 64238461 64262794 + MGP_WSBEiJ_P0059997 Lekr1 protein_coding protein_coding MGP_WSBEiJ_T0059998.1 MGP_WSBEiJ_G0026515.1 mouse_genomes_project 3 64238468 64260839 + Lekr1 protein_coding processed_transcript MGP_WSBEiJ_T0059999.1 MGP_WSBEiJ_G0026515.1 mouse_genomes_project 3 64238479 64321925 + Lekr1 protein_coding processed_transcript MGP_WSBEiJ_T0060000.1 MGP_WSBEiJ_G0026515.1 mouse_genomes_project 3 64238501 64240662 + Lekr1 protein_coding retained_intron MGP_WSBEiJ_T0060001.1 MGP_WSBEiJ_G0026515.1 mouse_genomes_project 3 64238515 64352181 + Lekr1 protein_coding processed_transcript MGP_WSBEiJ_T0060002.1 MGP_WSBEiJ_G0026515.1 mouse_genomes_project 3 64238550 64310782 + Lekr1 protein_coding processed_transcript MGP_WSBEiJ_T0060003.1 MGP_WSBEiJ_G0026515.1 mouse_genomes_project 3 64260667 64411546 + Lekr1 protein_coding processed_transcript MGP_WSBEiJ_T0007481.1 MGP_WSBEiJ_G0006130.1 mouse_genomes_project 3 86474507 86479256 + Gm37855 lincRNA lincRNA MGP_WSBEiJ_T0058910.1 MGP_WSBEiJ_G0026287.1 mouse_genomes_project 3 227025 392202 + MGP_WSBEiJ_P0058910 Hnf4g protein_coding protein_coding MGP_WSBEiJ_T0058911.1 MGP_WSBEiJ_G0026287.1 mouse_genomes_project 3 365778 392410 + MGP_WSBEiJ_P0058911 Hnf4g protein_coding protein_coding MGP_WSBEiJ_T0001154.1 MGP_WSBEiJ_G0001086.1 mouse_genomes_project 3 49423743 49423854 + TEC TEC MGP_WSBEiJ_T0061067.1 MGP_WSBEiJ_G0026763.1 mouse_genomes_project 3 92598710 92600048 - MGP_WSBEiJ_P0061067 Lce1l protein_coding protein_coding MGP_WSBEiJ_T0004175.1 MGP_WSBEiJ_G0003674.1 mouse_genomes_project 3 63686652 63857103 - antisense antisense MGP_WSBEiJ_T0004176.1 MGP_WSBEiJ_G0003674.1 mouse_genomes_project 3 63848717 63857075 - antisense antisense MGP_WSBEiJ_T0007332.1 MGP_WSBEiJ_G0006017.1 mouse_genomes_project 3 4713982 4744220 - 1700010I02Rik lincRNA lincRNA MGP_WSBEiJ_T0007333.1 MGP_WSBEiJ_G0006017.1 mouse_genomes_project 3 4713982 4744227 - 1700010I02Rik lincRNA lincRNA MGP_WSBEiJ_T0100801.1 MGP_WSBEiJ_G0039259.1 mouse_genomes_project 3 108702282 108706050 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0061907.1 MGP_WSBEiJ_G0026957.1 mouse_genomes_project 3 106335982 106352947 + MGP_WSBEiJ_P0061907 Fam212b protein_coding protein_coding MGP_WSBEiJ_T0061908.1 MGP_WSBEiJ_G0026957.1 mouse_genomes_project 3 106336869 106350253 + MGP_WSBEiJ_P0061908 Fam212b protein_coding protein_coding MGP_WSBEiJ_T0059797.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53418815 53731366 + MGP_WSBEiJ_P0059797 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059798.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53418977 53662096 + MGP_WSBEiJ_P0059798 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059799.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53418977 53731362 + MGP_WSBEiJ_P0059799 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059800.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53423510 53432862 + MGP_WSBEiJ_P0059800 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059801.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53423718 53432832 + Dclk1 protein_coding retained_intron MGP_WSBEiJ_T0059802.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53537995 53668759 + Dclk1 protein_coding processed_transcript MGP_WSBEiJ_T0059803.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53639665 53671393 + Dclk1 protein_coding retained_intron MGP_WSBEiJ_T0059804.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53651622 53662098 + MGP_WSBEiJ_P0059804 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059805.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53651652 53731362 + MGP_WSBEiJ_P0059805 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059806.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53651793 53728862 + MGP_WSBEiJ_P0059806 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059807.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53651810 53708123 + MGP_WSBEiJ_P0059807 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059808.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53651810 53728861 + MGP_WSBEiJ_P0059808 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059809.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53651810 53727447 + MGP_WSBEiJ_P0059809 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059810.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53651866 53713288 + MGP_WSBEiJ_P0059810 Dclk1 protein_coding protein_coding MGP_WSBEiJ_T0059812.1 MGP_WSBEiJ_G0026465.1 mouse_genomes_project 3 53718882 53726625 + Dclk1 protein_coding processed_transcript MGP_WSBEiJ_T0007464.1 MGP_WSBEiJ_G0006114.1 mouse_genomes_project 3 78611598 78615338 + 4930589L23Rik lincRNA lincRNA MGP_WSBEiJ_T0063133.1 MGP_WSBEiJ_G0027209.1 mouse_genomes_project 3 149130632 149189533 + MGP_WSBEiJ_P0063133 Uox protein_coding protein_coding MGP_WSBEiJ_T0063136.1 MGP_WSBEiJ_G0027209.1 mouse_genomes_project 3 149161455 149196687 + MGP_WSBEiJ_P0063136 Uox protein_coding protein_coding MGP_WSBEiJ_T0063137.1 MGP_WSBEiJ_G0027209.1 mouse_genomes_project 3 149161526 149176705 + MGP_WSBEiJ_P0063137 Uox protein_coding protein_coding MGP_WSBEiJ_T0063138.1 MGP_WSBEiJ_G0027209.1 mouse_genomes_project 3 149161543 149195029 + MGP_WSBEiJ_P0063138 Uox protein_coding protein_coding MGP_WSBEiJ_T0063139.1 MGP_WSBEiJ_G0027209.1 mouse_genomes_project 3 149161544 149176823 + Uox protein_coding retained_intron MGP_WSBEiJ_T0063140.1 MGP_WSBEiJ_G0027209.1 mouse_genomes_project 3 149174365 149176728 + Uox protein_coding retained_intron MGP_WSBEiJ_T0097045.1 MGP_WSBEiJ_G0035726.1 mouse_genomes_project 3 88359032 88359151 + n-R5s197 rRNA rRNA MGP_WSBEiJ_T0061073.1 MGP_WSBEiJ_G0026769.1 mouse_genomes_project 3 92742067 92743383 + MGP_WSBEiJ_P0061073 Lce3a protein_coding protein_coding MGP_WSBEiJ_T0001128.1 MGP_WSBEiJ_G0001060.1 mouse_genomes_project 3 37336097 37338816 + TEC TEC MGP_WSBEiJ_T0013899.1 MGP_WSBEiJ_G0012029.1 mouse_genomes_project 3 124414335 124414530 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007645.1 MGP_WSBEiJ_G0006259.1 mouse_genomes_project 3 151943737 152113911 - Gm30382 lincRNA lincRNA MGP_WSBEiJ_T0007646.1 MGP_WSBEiJ_G0006259.1 mouse_genomes_project 3 151944195 151983015 - Gm30382 lincRNA lincRNA MGP_WSBEiJ_T0007648.1 MGP_WSBEiJ_G0006259.1 mouse_genomes_project 3 151971967 152113936 - Gm30382 lincRNA lincRNA MGP_WSBEiJ_T0013651.1 MGP_WSBEiJ_G0011781.1 mouse_genomes_project 3 44992197 44993200 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098178.1 MGP_WSBEiJ_G0036841.1 mouse_genomes_project 3 85463984 85464095 + Gm23025 snRNA snRNA MGP_WSBEiJ_T0013579.1 MGP_WSBEiJ_G0011709.1 mouse_genomes_project 3 17005052 17005612 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007369.1 MGP_WSBEiJ_G0006041.1 mouse_genomes_project 3 24353611 24356605 + 1700125G22Rik lincRNA lincRNA MGP_WSBEiJ_T0013742.1 MGP_WSBEiJ_G0011872.1 mouse_genomes_project 3 70929986 70930205 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001259.1 MGP_WSBEiJ_G0001189.1 mouse_genomes_project 3 117685592 117686031 + TEC TEC MGP_WSBEiJ_T0001105.1 MGP_WSBEiJ_G0001037.1 mouse_genomes_project 3 30523791 30526618 - TEC TEC MGP_WSBEiJ_T0097378.1 MGP_WSBEiJ_G0036052.1 mouse_genomes_project 3 106419797 106421955 - Gm43330 sense_intronic sense_intronic MGP_WSBEiJ_T0004210.1 MGP_WSBEiJ_G0003700.1 mouse_genomes_project 3 94869456 94872431 - B230398E01Rik antisense antisense MGP_WSBEiJ_T0059155.1 MGP_WSBEiJ_G0026354.1 mouse_genomes_project 3 25057119 25070243 + MGP_WSBEiJ_P0059155 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0061078.1 MGP_WSBEiJ_G0026772.1 mouse_genomes_project 3 92935403 92940071 + MGP_WSBEiJ_P0061078 Crnn protein_coding protein_coding MGP_WSBEiJ_T0061079.1 MGP_WSBEiJ_G0026772.1 mouse_genomes_project 3 92935405 92940419 + MGP_WSBEiJ_P0061079 Crnn protein_coding protein_coding MGP_WSBEiJ_T0061080.1 MGP_WSBEiJ_G0026772.1 mouse_genomes_project 3 92938809 92940418 + MGP_WSBEiJ_P0061080 Crnn protein_coding protein_coding MGP_WSBEiJ_T0062265.1 MGP_WSBEiJ_G0027044.1 mouse_genomes_project 3 117235354 117254823 - MGP_WSBEiJ_P0062265 Vcam1 protein_coding protein_coding MGP_WSBEiJ_T0062266.1 MGP_WSBEiJ_G0027044.1 mouse_genomes_project 3 117241830 117245919 - Vcam1 protein_coding retained_intron MGP_WSBEiJ_T0062267.1 MGP_WSBEiJ_G0027044.1 mouse_genomes_project 3 117247471 117254592 - MGP_WSBEiJ_P0062267 Vcam1 protein_coding protein_coding MGP_WSBEiJ_T0062268.1 MGP_WSBEiJ_G0027044.1 mouse_genomes_project 3 117249809 117254076 - MGP_WSBEiJ_P0062268 Vcam1 protein_coding protein_coding MGP_WSBEiJ_T0062298.1 MGP_WSBEiJ_G0027051.1 mouse_genomes_project 3 117748237 117775183 + MGP_WSBEiJ_P0062298 Sass6 protein_coding protein_coding MGP_WSBEiJ_T0062299.1 MGP_WSBEiJ_G0027051.1 mouse_genomes_project 3 117748258 117758462 + Sass6 protein_coding processed_transcript MGP_WSBEiJ_T0062300.1 MGP_WSBEiJ_G0027051.1 mouse_genomes_project 3 117748267 117784408 + MGP_WSBEiJ_P0062300 Sass6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062301.1 MGP_WSBEiJ_G0027051.1 mouse_genomes_project 3 117748369 117782205 + MGP_WSBEiJ_P0062301 Sass6 protein_coding protein_coding MGP_WSBEiJ_T0062303.1 MGP_WSBEiJ_G0027051.1 mouse_genomes_project 3 117766910 117772832 + Sass6 protein_coding processed_transcript MGP_WSBEiJ_T0062305.1 MGP_WSBEiJ_G0027051.1 mouse_genomes_project 3 117775039 117780957 + Sass6 protein_coding retained_intron MGP_WSBEiJ_T0062306.1 MGP_WSBEiJ_G0027051.1 mouse_genomes_project 3 117779339 117782523 + Sass6 protein_coding retained_intron MGP_WSBEiJ_T0001336.1 MGP_WSBEiJ_G0001265.1 mouse_genomes_project 3 148863137 148864455 + TEC TEC MGP_WSBEiJ_T0062635.1 MGP_WSBEiJ_G0027108.1 mouse_genomes_project 3 131555618 131571952 - MGP_WSBEiJ_P0062635 Lrit3 protein_coding protein_coding MGP_WSBEiJ_T0062636.1 MGP_WSBEiJ_G0027108.1 mouse_genomes_project 3 131556028 131571952 - MGP_WSBEiJ_P0062636 Lrit3 protein_coding protein_coding MGP_WSBEiJ_T0062637.1 MGP_WSBEiJ_G0027108.1 mouse_genomes_project 3 131558468 131568444 - Lrit3 protein_coding retained_intron MGP_WSBEiJ_T0013786.1 MGP_WSBEiJ_G0011916.1 mouse_genomes_project 3 90331772 90332506 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013672.1 MGP_WSBEiJ_G0011802.1 mouse_genomes_project 3 49401831 49402150 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059742.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855614 52892053 + MGP_WSBEiJ_P0059742 Supt20 protein_coding protein_coding MGP_WSBEiJ_T0059743.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855630 52892179 + MGP_WSBEiJ_P0059743 Supt20 protein_coding protein_coding MGP_WSBEiJ_T0059744.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855630 52892179 + MGP_WSBEiJ_P0059744 Supt20 protein_coding protein_coding MGP_WSBEiJ_T0059745.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855632 52892183 + MGP_WSBEiJ_P0059745 Supt20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059746.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855642 52870406 + MGP_WSBEiJ_P0059746 Supt20 protein_coding protein_coding MGP_WSBEiJ_T0059747.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855665 52876294 + Supt20 protein_coding retained_intron MGP_WSBEiJ_T0059748.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855665 52858822 + Supt20 protein_coding retained_intron MGP_WSBEiJ_T0059749.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855665 52859786 + Supt20 protein_coding retained_intron MGP_WSBEiJ_T0059750.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855669 52870637 + MGP_WSBEiJ_P0059750 Supt20 protein_coding protein_coding MGP_WSBEiJ_T0059751.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855912 52880377 + MGP_WSBEiJ_P0059751 Supt20 protein_coding protein_coding MGP_WSBEiJ_T0059752.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52855920 52892180 + MGP_WSBEiJ_P0059752 Supt20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059753.1 MGP_WSBEiJ_G0026454.1 mouse_genomes_project 3 52875779 52877892 + Supt20 protein_coding retained_intron MGP_WSBEiJ_T0100780.1 MGP_WSBEiJ_G0039238.1 mouse_genomes_project 3 90632599 90639655 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097373.1 MGP_WSBEiJ_G0036047.1 mouse_genomes_project 3 105445241 105446982 - Gm42659 sense_intronic sense_intronic MGP_WSBEiJ_T0097363.1 MGP_WSBEiJ_G0036037.1 mouse_genomes_project 3 104715118 104717035 - Gm43258 sense_intronic sense_intronic MGP_WSBEiJ_T0063101.1 MGP_WSBEiJ_G0027202.1 mouse_genomes_project 3 148675617 148726962 + MGP_WSBEiJ_P0063101 Mcoln2 protein_coding protein_coding MGP_WSBEiJ_T0063102.1 MGP_WSBEiJ_G0027202.1 mouse_genomes_project 3 148675763 148703115 + Mcoln2 protein_coding retained_intron MGP_WSBEiJ_T0063103.1 MGP_WSBEiJ_G0027202.1 mouse_genomes_project 3 148675958 148726961 + MGP_WSBEiJ_P0063103 Mcoln2 protein_coding protein_coding MGP_WSBEiJ_T0063104.1 MGP_WSBEiJ_G0027202.1 mouse_genomes_project 3 148721036 148723935 + MGP_WSBEiJ_P0063104 Mcoln2 protein_coding protein_coding MGP_WSBEiJ_T0063105.1 MGP_WSBEiJ_G0027202.1 mouse_genomes_project 3 148723531 148726589 + Mcoln2 protein_coding retained_intron MGP_WSBEiJ_T0061057.1 MGP_WSBEiJ_G0026754.1 mouse_genomes_project 3 92435943 92438666 + MGP_WSBEiJ_P0061057 Lce1c protein_coding protein_coding MGP_WSBEiJ_T0007653.1 MGP_WSBEiJ_G0006263.1 mouse_genomes_project 3 153870378 153874425 + Gm43468 lincRNA lincRNA MGP_WSBEiJ_T0010354.1 MGP_WSBEiJ_G0008511.1 mouse_genomes_project 3 87577662 87577751 + Mir9-1 miRNA miRNA MGP_WSBEiJ_T0013775.1 MGP_WSBEiJ_G0011905.1 mouse_genomes_project 3 85541207 85541541 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061046.1 MGP_WSBEiJ_G0026745.1 mouse_genomes_project 3 92257264 92257495 - MGP_WSBEiJ_P0061046 Sprr4 protein_coding protein_coding MGP_WSBEiJ_T0062185.1 MGP_WSBEiJ_G0027026.1 mouse_genomes_project 3 109723735 109732604 - MGP_WSBEiJ_P0062185 Prpf38b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062186.1 MGP_WSBEiJ_G0027026.1 mouse_genomes_project 3 109723737 109732635 - MGP_WSBEiJ_P0062186 Prpf38b protein_coding protein_coding MGP_WSBEiJ_T0062187.1 MGP_WSBEiJ_G0027026.1 mouse_genomes_project 3 109724077 109732376 - MGP_WSBEiJ_P0062187 Prpf38b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062188.1 MGP_WSBEiJ_G0027026.1 mouse_genomes_project 3 109725191 109726516 - Prpf38b protein_coding retained_intron MGP_WSBEiJ_T0062189.1 MGP_WSBEiJ_G0027026.1 mouse_genomes_project 3 109725406 109727049 - Prpf38b protein_coding processed_transcript MGP_WSBEiJ_T0062190.1 MGP_WSBEiJ_G0027026.1 mouse_genomes_project 3 109725551 109728889 - Prpf38b protein_coding processed_transcript MGP_WSBEiJ_T0062191.1 MGP_WSBEiJ_G0027026.1 mouse_genomes_project 3 109727491 109732618 - Prpf38b protein_coding retained_intron MGP_WSBEiJ_T0062192.1 MGP_WSBEiJ_G0027026.1 mouse_genomes_project 3 109727494 109731537 - Prpf38b protein_coding retained_intron MGP_WSBEiJ_T0060535.1 MGP_WSBEiJ_G0026639.1 mouse_genomes_project 3 87790359 87804973 - MGP_WSBEiJ_P0060535 Slc25a44 protein_coding protein_coding MGP_WSBEiJ_T0060536.1 MGP_WSBEiJ_G0026639.1 mouse_genomes_project 3 87790359 87804974 - MGP_WSBEiJ_P0060536 Slc25a44 protein_coding protein_coding MGP_WSBEiJ_T0060537.1 MGP_WSBEiJ_G0026639.1 mouse_genomes_project 3 87790360 87805005 - MGP_WSBEiJ_P0060537 Slc25a44 protein_coding protein_coding MGP_WSBEiJ_T0060538.1 MGP_WSBEiJ_G0026639.1 mouse_genomes_project 3 87790360 87804978 - MGP_WSBEiJ_P0060538 Slc25a44 protein_coding protein_coding MGP_WSBEiJ_T0098183.1 MGP_WSBEiJ_G0036846.1 mouse_genomes_project 3 88430016 88430123 - Gm26465 snRNA snRNA MGP_WSBEiJ_T0059665.1 MGP_WSBEiJ_G0026438.1 mouse_genomes_project 3 49403610 49409126 - MGP_WSBEiJ_P0059665 Ndufc1 protein_coding protein_coding MGP_WSBEiJ_T0059666.1 MGP_WSBEiJ_G0026438.1 mouse_genomes_project 3 49404390 49407619 - Ndufc1 protein_coding retained_intron MGP_WSBEiJ_T0059667.1 MGP_WSBEiJ_G0026438.1 mouse_genomes_project 3 49404413 49408804 - Ndufc1 protein_coding processed_transcript MGP_WSBEiJ_T0059668.1 MGP_WSBEiJ_G0026438.1 mouse_genomes_project 3 49404517 49409102 - MGP_WSBEiJ_P0059668 Ndufc1 protein_coding protein_coding MGP_WSBEiJ_T0013808.1 MGP_WSBEiJ_G0011938.1 mouse_genomes_project 3 95406529 95406881 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017396.1 MGP_WSBEiJ_G0014941.1 mouse_genomes_project 3 109951604 109953966 - Gm43223 processed_transcript lincRNA MGP_WSBEiJ_T0017397.1 MGP_WSBEiJ_G0014941.1 mouse_genomes_project 3 109951613 109953744 - Gm43223 processed_transcript processed_transcript MGP_WSBEiJ_T0010333.1 MGP_WSBEiJ_G0008490.1 mouse_genomes_project 3 26759798 26759896 + Mir551b miRNA miRNA MGP_WSBEiJ_T0013938.1 MGP_WSBEiJ_G0012068.1 mouse_genomes_project 3 137984877 137987011 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004137.1 MGP_WSBEiJ_G0003646.1 mouse_genomes_project 3 30420355 30471711 + Gm37459 antisense antisense MGP_WSBEiJ_T0004138.1 MGP_WSBEiJ_G0003646.1 mouse_genomes_project 3 30461141 30468274 + Gm37459 antisense antisense MGP_WSBEiJ_T0001262.1 MGP_WSBEiJ_G0001192.1 mouse_genomes_project 3 119810496 119814631 + TEC TEC MGP_WSBEiJ_T0004338.1 MGP_WSBEiJ_G0003782.1 mouse_genomes_project 3 161109633 161119567 - B230334C09Rik antisense antisense MGP_WSBEiJ_T0061059.1 MGP_WSBEiJ_G0026756.1 mouse_genomes_project 3 92466327 92468023 - MGP_WSBEiJ_P0061059 Lce1f protein_coding protein_coding MGP_WSBEiJ_T0062453.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124420934 124477322 - MGP_WSBEiJ_P0062453 Usp53 protein_coding protein_coding MGP_WSBEiJ_T0062454.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124436974 124439404 - Usp53 protein_coding retained_intron MGP_WSBEiJ_T0062455.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124441073 124477135 - MGP_WSBEiJ_P0062455 Usp53 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062456.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124442413 124477318 - MGP_WSBEiJ_P0062456 Usp53 protein_coding protein_coding MGP_WSBEiJ_T0062457.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124445356 124477316 - MGP_WSBEiJ_P0062457 Usp53 protein_coding protein_coding MGP_WSBEiJ_T0062458.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124446843 124477322 - Usp53 protein_coding retained_intron MGP_WSBEiJ_T0062459.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124449438 124451779 - Usp53 protein_coding retained_intron MGP_WSBEiJ_T0062460.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124449481 124477283 - MGP_WSBEiJ_P0062460 Usp53 protein_coding protein_coding MGP_WSBEiJ_T0062461.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124450090 124453497 - Usp53 protein_coding retained_intron MGP_WSBEiJ_T0062462.1 MGP_WSBEiJ_G0027081.1 mouse_genomes_project 3 124458699 124476705 - Usp53 protein_coding retained_intron MGP_WSBEiJ_T0001198.1 MGP_WSBEiJ_G0001128.1 mouse_genomes_project 3 58949718 58953121 + TEC TEC MGP_WSBEiJ_T0007341.1 MGP_WSBEiJ_G0006022.1 mouse_genomes_project 3 6867347 6871817 - Gm38335 lincRNA lincRNA MGP_WSBEiJ_T0062777.1 MGP_WSBEiJ_G0027136.1 mouse_genomes_project 3 136706063 136813428 + MGP_WSBEiJ_P0062777 Tacr3 protein_coding protein_coding MGP_WSBEiJ_T0100779.1 MGP_WSBEiJ_G0039237.1 mouse_genomes_project 3 90470940 90472823 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098149.1 MGP_WSBEiJ_G0036812.1 mouse_genomes_project 3 21661579 21661686 + Gm24704 snRNA snRNA MGP_WSBEiJ_T0004334.1 MGP_WSBEiJ_G0003780.1 mouse_genomes_project 3 160562478 160569247 - Gm43159 antisense antisense MGP_WSBEiJ_T0004239.1 MGP_WSBEiJ_G0003718.1 mouse_genomes_project 3 103198215 103215743 - Tspan2os antisense antisense MGP_WSBEiJ_T0060985.1 MGP_WSBEiJ_G0026711.1 mouse_genomes_project 3 90119214 90122577 - MGP_WSBEiJ_P0060985 S100a1 protein_coding protein_coding MGP_WSBEiJ_T0060986.1 MGP_WSBEiJ_G0026711.1 mouse_genomes_project 3 90119217 90122463 - MGP_WSBEiJ_P0060986 S100a1 protein_coding protein_coding MGP_WSBEiJ_T0062202.1 MGP_WSBEiJ_G0027030.1 mouse_genomes_project 3 109904266 109947598 + MGP_WSBEiJ_P0062202 Slc25a54 protein_coding protein_coding MGP_WSBEiJ_T0062203.1 MGP_WSBEiJ_G0027030.1 mouse_genomes_project 3 109904296 109947493 + MGP_WSBEiJ_P0062203 Slc25a54 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098165.1 MGP_WSBEiJ_G0036828.1 mouse_genomes_project 3 58449815 58449922 - Gm24382 snRNA snRNA MGP_WSBEiJ_T0013780.1 MGP_WSBEiJ_G0011910.1 mouse_genomes_project 3 87279332 87288100 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004292.1 MGP_WSBEiJ_G0003750.1 mouse_genomes_project 3 131278639 131283344 - Gm35986 antisense antisense MGP_WSBEiJ_T0004293.1 MGP_WSBEiJ_G0003750.1 mouse_genomes_project 3 131278804 131283623 - Gm35986 antisense antisense MGP_WSBEiJ_T0001353.1 MGP_WSBEiJ_G0001282.1 mouse_genomes_project 3 157175745 157177713 - TEC TEC MGP_WSBEiJ_T0007382.1 MGP_WSBEiJ_G0006053.1 mouse_genomes_project 3 32125576 32129296 - Gm43207 lincRNA lincRNA MGP_WSBEiJ_T0099453.1 MGP_WSBEiJ_G0038116.1 mouse_genomes_project 3 88512705 88512835 - Gm24403 snoRNA snoRNA MGP_WSBEiJ_T0060630.1 MGP_WSBEiJ_G0026652.1 mouse_genomes_project 3 88248700 88363267 + MGP_WSBEiJ_P0060630 Gon4l protein_coding protein_coding MGP_WSBEiJ_T0060631.1 MGP_WSBEiJ_G0026652.1 mouse_genomes_project 3 88250495 88363262 + MGP_WSBEiJ_P0060631 Gon4l protein_coding protein_coding MGP_WSBEiJ_T0060632.1 MGP_WSBEiJ_G0026652.1 mouse_genomes_project 3 88250495 88328567 + MGP_WSBEiJ_P0060632 Gon4l protein_coding unknown_likely_coding MGP_WSBEiJ_T0060633.1 MGP_WSBEiJ_G0026652.1 mouse_genomes_project 3 88250495 88363262 + MGP_WSBEiJ_P0060633 Gon4l protein_coding protein_coding MGP_WSBEiJ_T0060634.1 MGP_WSBEiJ_G0026652.1 mouse_genomes_project 3 88333970 88353277 + Gon4l protein_coding retained_intron MGP_WSBEiJ_T0060635.1 MGP_WSBEiJ_G0026652.1 mouse_genomes_project 3 88336389 88362551 + MGP_WSBEiJ_P0060635 Gon4l protein_coding unknown_likely_coding MGP_WSBEiJ_T0059328.1 MGP_WSBEiJ_G0026384.1 mouse_genomes_project 3 30200361 30211899 - MGP_WSBEiJ_P0059328 Mrpl47 protein_coding protein_coding MGP_WSBEiJ_T0059329.1 MGP_WSBEiJ_G0026384.1 mouse_genomes_project 3 30202539 30207363 - Mrpl47 protein_coding processed_transcript MGP_WSBEiJ_T0059330.1 MGP_WSBEiJ_G0026384.1 mouse_genomes_project 3 30210852 30212355 - Mrpl47 protein_coding retained_intron MGP_WSBEiJ_T0100768.1 MGP_WSBEiJ_G0039226.1 mouse_genomes_project 3 78081725 78082250 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013788.1 MGP_WSBEiJ_G0011918.1 mouse_genomes_project 3 90661432 90661735 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063307.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824646 156829671 - MGP_WSBEiJ_P0063307 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063308.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824648 156830369 - MGP_WSBEiJ_P0063308 Rabggtb protein_coding protein_coding MGP_WSBEiJ_T0063309.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824648 156829505 - MGP_WSBEiJ_P0063309 Rabggtb protein_coding protein_coding MGP_WSBEiJ_T0063310.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824650 156830287 - MGP_WSBEiJ_P0063310 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063311.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824652 156830353 - MGP_WSBEiJ_P0063311 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063312.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824813 156829441 - MGP_WSBEiJ_P0063312 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063313.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824931 156829441 - MGP_WSBEiJ_P0063313 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063314.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824931 156829441 - MGP_WSBEiJ_P0063314 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063315.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156824931 156829441 - MGP_WSBEiJ_P0063315 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063316.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156825434 156829393 - MGP_WSBEiJ_P0063316 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063317.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156826773 156830315 - MGP_WSBEiJ_P0063317 Rabggtb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063318.1 MGP_WSBEiJ_G0027233.1 mouse_genomes_project 3 156829345 156830291 - Rabggtb protein_coding processed_transcript MGP_WSBEiJ_T0007359.1 MGP_WSBEiJ_G0006032.1 mouse_genomes_project 3 15521963 15534158 - 4930433B08Rik lincRNA lincRNA MGP_WSBEiJ_T0004274.1 MGP_WSBEiJ_G0003736.1 mouse_genomes_project 3 117782560 117784388 - Gm42893 antisense antisense MGP_WSBEiJ_T0062053.1 MGP_WSBEiJ_G0026997.1 mouse_genomes_project 3 108690327 108695121 - MGP_WSBEiJ_P0062053 Gstm6 protein_coding protein_coding MGP_WSBEiJ_T0062054.1 MGP_WSBEiJ_G0026997.1 mouse_genomes_project 3 108690335 108695222 - MGP_WSBEiJ_P0062054 Gstm6 protein_coding protein_coding MGP_WSBEiJ_T0062055.1 MGP_WSBEiJ_G0026997.1 mouse_genomes_project 3 108690593 108694871 - MGP_WSBEiJ_P0062055 Gstm6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062056.1 MGP_WSBEiJ_G0026997.1 mouse_genomes_project 3 108693305 108695203 - Gstm6 protein_coding processed_transcript MGP_WSBEiJ_T0062575.1 MGP_WSBEiJ_G0027097.1 mouse_genomes_project 3 129187756 129190213 - MGP_WSBEiJ_P0062575 protein_coding protein_coding MGP_WSBEiJ_T0100762.1 MGP_WSBEiJ_G0039220.1 mouse_genomes_project 3 63281649 63282507 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007643.1 MGP_WSBEiJ_G0006258.1 mouse_genomes_project 3 151874065 151878141 - Gm10287 lincRNA lincRNA MGP_WSBEiJ_T0007644.1 MGP_WSBEiJ_G0006258.1 mouse_genomes_project 3 151874071 151878141 - Gm10287 lincRNA lincRNA MGP_WSBEiJ_T0059037.1 MGP_WSBEiJ_G0026331.1 mouse_genomes_project 3 15623727 15625328 + MGP_WSBEiJ_P0059037 protein_coding protein_coding MGP_WSBEiJ_T0001095.1 MGP_WSBEiJ_G0001027.1 mouse_genomes_project 3 27651146 27653261 - TEC TEC MGP_WSBEiJ_T0010343.1 MGP_WSBEiJ_G0008500.1 mouse_genomes_project 3 49288968 49289034 + Gm24282 miRNA miRNA MGP_WSBEiJ_T0013756.1 MGP_WSBEiJ_G0011886.1 mouse_genomes_project 3 77111208 77112773 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098222.1 MGP_WSBEiJ_G0036885.1 mouse_genomes_project 3 145065021 145065126 - Gm24457 snRNA snRNA MGP_WSBEiJ_T0001205.1 MGP_WSBEiJ_G0001135.1 mouse_genomes_project 3 66056519 66058360 + TEC TEC MGP_WSBEiJ_T0059824.1 MGP_WSBEiJ_G0026469.1 mouse_genomes_project 3 55484887 55501264 - MGP_WSBEiJ_P0059824 Tm4sf1 protein_coding protein_coding MGP_WSBEiJ_T0059825.1 MGP_WSBEiJ_G0026469.1 mouse_genomes_project 3 55484887 55494188 - MGP_WSBEiJ_P0059825 Tm4sf1 protein_coding protein_coding MGP_WSBEiJ_T0059826.1 MGP_WSBEiJ_G0026469.1 mouse_genomes_project 3 55486760 55501316 - MGP_WSBEiJ_P0059826 Tm4sf1 protein_coding protein_coding MGP_WSBEiJ_T0059827.1 MGP_WSBEiJ_G0026469.1 mouse_genomes_project 3 55486792 55493851 - Tm4sf1 protein_coding processed_transcript MGP_WSBEiJ_T0059828.1 MGP_WSBEiJ_G0026469.1 mouse_genomes_project 3 55492080 55494424 - MGP_WSBEiJ_P0059828 Tm4sf1 protein_coding protein_coding MGP_WSBEiJ_T0059829.1 MGP_WSBEiJ_G0026469.1 mouse_genomes_project 3 55492116 55493002 - Tm4sf1 protein_coding retained_intron MGP_WSBEiJ_T0059028.1 MGP_WSBEiJ_G0026326.1 mouse_genomes_project 3 12927053 13026734 - MGP_WSBEiJ_P0059028 Gm5150 protein_coding protein_coding MGP_WSBEiJ_T0059029.1 MGP_WSBEiJ_G0026326.1 mouse_genomes_project 3 12928253 13026629 - MGP_WSBEiJ_P0059029 Gm5150 protein_coding protein_coding MGP_WSBEiJ_T0063125.1 MGP_WSBEiJ_G0027207.1 mouse_genomes_project 3 149054711 149060477 + MGP_WSBEiJ_P0063125 Gng5 protein_coding protein_coding MGP_WSBEiJ_T0063126.1 MGP_WSBEiJ_G0027207.1 mouse_genomes_project 3 149054794 149060452 + MGP_WSBEiJ_P0063126 Gng5 protein_coding protein_coding MGP_WSBEiJ_T0063127.1 MGP_WSBEiJ_G0027207.1 mouse_genomes_project 3 149055013 149060453 + MGP_WSBEiJ_P0063127 Gng5 protein_coding protein_coding MGP_WSBEiJ_T0059983.1 MGP_WSBEiJ_G0026510.1 mouse_genomes_project 3 62582263 62609285 - MGP_WSBEiJ_P0059983 protein_coding protein_coding MGP_WSBEiJ_T0007585.1 MGP_WSBEiJ_G0006206.1 mouse_genomes_project 3 132686108 132687603 + Gm36520 lincRNA lincRNA MGP_WSBEiJ_T0001285.1 MGP_WSBEiJ_G0001215.1 mouse_genomes_project 3 128189823 128194326 + TEC TEC MGP_WSBEiJ_T0013965.1 MGP_WSBEiJ_G0012095.1 mouse_genomes_project 3 147101848 147102370 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098184.1 MGP_WSBEiJ_G0036847.1 mouse_genomes_project 3 88563775 88563879 - Gm22935 snRNA snRNA MGP_WSBEiJ_T0001266.1 MGP_WSBEiJ_G0001196.1 mouse_genomes_project 3 122377578 122378275 - TEC TEC MGP_WSBEiJ_T0098219.1 MGP_WSBEiJ_G0036882.1 mouse_genomes_project 3 139723540 139723645 + Gm25080 snRNA snRNA MGP_WSBEiJ_T0013807.1 MGP_WSBEiJ_G0011937.1 mouse_genomes_project 3 95350875 95351275 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061058.1 MGP_WSBEiJ_G0026755.1 mouse_genomes_project 3 92444273 92446015 - MGP_WSBEiJ_P0061058 Lce1d protein_coding protein_coding MGP_WSBEiJ_T0017366.1 MGP_WSBEiJ_G0014927.1 mouse_genomes_project 3 50219886 50221271 + Gm38132 processed_transcript lincRNA MGP_WSBEiJ_T0017367.1 MGP_WSBEiJ_G0014927.1 mouse_genomes_project 3 50219915 50220928 + Gm38132 processed_transcript retained_intron MGP_WSBEiJ_T0004284.1 MGP_WSBEiJ_G0003743.1 mouse_genomes_project 3 124966071 124969200 - Gm43591 antisense antisense MGP_WSBEiJ_T0001305.1 MGP_WSBEiJ_G0001235.1 mouse_genomes_project 3 129533272 129533937 - TEC TEC MGP_WSBEiJ_T0060833.1 MGP_WSBEiJ_G0026686.1 mouse_genomes_project 3 89020596 89174544 + MGP_WSBEiJ_P0060833 Kcnn3 protein_coding protein_coding MGP_WSBEiJ_T0060834.1 MGP_WSBEiJ_G0026686.1 mouse_genomes_project 3 89169351 89183279 + Kcnn3 protein_coding retained_intron MGP_WSBEiJ_T0062868.1 MGP_WSBEiJ_G0027152.1 mouse_genomes_project 3 139883297 139887761 + MGP_WSBEiJ_P0062868 H2afz protein_coding protein_coding MGP_WSBEiJ_T0062869.1 MGP_WSBEiJ_G0027152.1 mouse_genomes_project 3 139883315 139887025 + H2afz protein_coding processed_transcript MGP_WSBEiJ_T0062870.1 MGP_WSBEiJ_G0027152.1 mouse_genomes_project 3 139883418 139887390 + MGP_WSBEiJ_P0062870 H2afz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062871.1 MGP_WSBEiJ_G0027152.1 mouse_genomes_project 3 139883418 139887867 + MGP_WSBEiJ_P0062871 H2afz protein_coding protein_coding MGP_WSBEiJ_T0062872.1 MGP_WSBEiJ_G0027152.1 mouse_genomes_project 3 139885938 139887478 + H2afz protein_coding retained_intron MGP_WSBEiJ_T0062873.1 MGP_WSBEiJ_G0027152.1 mouse_genomes_project 3 139886058 139887329 + H2afz protein_coding retained_intron MGP_WSBEiJ_T0059831.1 MGP_WSBEiJ_G0026471.1 mouse_genomes_project 3 55654866 55774002 - MGP_WSBEiJ_P0059831 Wwtr1 protein_coding protein_coding MGP_WSBEiJ_T0059832.1 MGP_WSBEiJ_G0026471.1 mouse_genomes_project 3 55654999 55774084 - MGP_WSBEiJ_P0059832 Wwtr1 protein_coding protein_coding MGP_WSBEiJ_T0060852.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89479184 89501193 - MGP_WSBEiJ_P0060852 Atp8b2 protein_coding protein_coding MGP_WSBEiJ_T0060853.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89479184 89504072 - MGP_WSBEiJ_P0060853 Atp8b2 protein_coding protein_coding MGP_WSBEiJ_T0060854.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89479192 89493987 - Atp8b2 protein_coding retained_intron MGP_WSBEiJ_T0060855.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89479861 89503843 - Atp8b2 protein_coding retained_intron MGP_WSBEiJ_T0060856.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89480554 89504072 - MGP_WSBEiJ_P0060856 Atp8b2 protein_coding protein_coding MGP_WSBEiJ_T0060857.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89480902 89483471 - MGP_WSBEiJ_P0060857 Atp8b2 protein_coding protein_coding MGP_WSBEiJ_T0060858.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89483427 89485467 - Atp8b2 protein_coding retained_intron MGP_WSBEiJ_T0060859.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89484891 89486176 - MGP_WSBEiJ_P0060859 Atp8b2 protein_coding protein_coding MGP_WSBEiJ_T0060860.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89485743 89486259 - Atp8b2 protein_coding retained_intron MGP_WSBEiJ_T0060861.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89486139 89487055 - Atp8b2 protein_coding retained_intron MGP_WSBEiJ_T0060862.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89486166 89488118 - MGP_WSBEiJ_P0060862 Atp8b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060863.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89486230 89488248 - Atp8b2 protein_coding retained_intron MGP_WSBEiJ_T0060864.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89488260 89490161 - Atp8b2 protein_coding retained_intron MGP_WSBEiJ_T0060865.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89494460 89495261 - Atp8b2 protein_coding retained_intron MGP_WSBEiJ_T0060866.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89494891 89500118 - MGP_WSBEiJ_P0060866 Atp8b2 protein_coding protein_coding MGP_WSBEiJ_T0060867.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89498571 89503678 - MGP_WSBEiJ_P0060867 Atp8b2 protein_coding protein_coding MGP_WSBEiJ_T0060868.1 MGP_WSBEiJ_G0026692.1 mouse_genomes_project 3 89499117 89502379 - MGP_WSBEiJ_P0060868 Atp8b2 protein_coding protein_coding MGP_WSBEiJ_T0007524.1 MGP_WSBEiJ_G0006160.1 mouse_genomes_project 3 102720414 102721011 + Gm43241 lincRNA lincRNA MGP_WSBEiJ_T0011333.1 MGP_WSBEiJ_G0009490.1 mouse_genomes_project 3 21829954 21830220 + Gm24062 misc_RNA misc_RNA MGP_WSBEiJ_T0062448.1 MGP_WSBEiJ_G0027078.1 mouse_genomes_project 3 124198004 124338506 + MGP_WSBEiJ_P0062448 Pde5a protein_coding protein_coding MGP_WSBEiJ_T0062449.1 MGP_WSBEiJ_G0027078.1 mouse_genomes_project 3 124198627 124338504 + MGP_WSBEiJ_P0062449 Pde5a protein_coding protein_coding MGP_WSBEiJ_T0062450.1 MGP_WSBEiJ_G0027078.1 mouse_genomes_project 3 124199279 124247012 + Pde5a protein_coding retained_intron MGP_WSBEiJ_T0001143.1 MGP_WSBEiJ_G0001075.1 mouse_genomes_project 3 47137438 47138504 + TEC TEC MGP_WSBEiJ_T0062313.1 MGP_WSBEiJ_G0027054.1 mouse_genomes_project 3 117827125 117869940 - MGP_WSBEiJ_P0062313 Slc35a3 protein_coding protein_coding MGP_WSBEiJ_T0062314.1 MGP_WSBEiJ_G0027054.1 mouse_genomes_project 3 117827600 117887519 - MGP_WSBEiJ_P0062314 Slc35a3 protein_coding protein_coding MGP_WSBEiJ_T0062315.1 MGP_WSBEiJ_G0027054.1 mouse_genomes_project 3 117827641 117830399 - Slc35a3 protein_coding processed_transcript MGP_WSBEiJ_T0062316.1 MGP_WSBEiJ_G0027054.1 mouse_genomes_project 3 117836067 117869551 - MGP_WSBEiJ_P0062316 Slc35a3 protein_coding protein_coding MGP_WSBEiJ_T0062317.1 MGP_WSBEiJ_G0027054.1 mouse_genomes_project 3 117836202 117869921 - MGP_WSBEiJ_P0062317 Slc35a3 protein_coding protein_coding MGP_WSBEiJ_T0062318.1 MGP_WSBEiJ_G0027054.1 mouse_genomes_project 3 117845383 117869966 - Slc35a3 protein_coding retained_intron MGP_WSBEiJ_T0062319.1 MGP_WSBEiJ_G0027054.1 mouse_genomes_project 3 117850989 117870540 - MGP_WSBEiJ_P0062319 Slc35a3 protein_coding protein_coding MGP_WSBEiJ_T0060676.1 MGP_WSBEiJ_G0026660.1 mouse_genomes_project 3 88613296 88630649 - MGP_WSBEiJ_P0060676 Hcn3 protein_coding protein_coding MGP_WSBEiJ_T0060677.1 MGP_WSBEiJ_G0026660.1 mouse_genomes_project 3 88615943 88618444 - Hcn3 protein_coding retained_intron MGP_WSBEiJ_T0060678.1 MGP_WSBEiJ_G0026660.1 mouse_genomes_project 3 88616060 88618426 - Hcn3 protein_coding retained_intron MGP_WSBEiJ_T0060679.1 MGP_WSBEiJ_G0026660.1 mouse_genomes_project 3 88618692 88630433 - Hcn3 protein_coding processed_transcript MGP_WSBEiJ_T0062443.1 MGP_WSBEiJ_G0027077.1 mouse_genomes_project 3 123992959 124020084 - MGP_WSBEiJ_P0062443 Fnbp1l protein_coding protein_coding MGP_WSBEiJ_T0062444.1 MGP_WSBEiJ_G0027077.1 mouse_genomes_project 3 123992965 124076368 - MGP_WSBEiJ_P0062444 Fnbp1l protein_coding protein_coding MGP_WSBEiJ_T0062445.1 MGP_WSBEiJ_G0027077.1 mouse_genomes_project 3 123996342 124076206 - MGP_WSBEiJ_P0062445 Fnbp1l protein_coding protein_coding MGP_WSBEiJ_T0062446.1 MGP_WSBEiJ_G0027077.1 mouse_genomes_project 3 124002306 124009404 - Fnbp1l protein_coding retained_intron MGP_WSBEiJ_T0062447.1 MGP_WSBEiJ_G0027077.1 mouse_genomes_project 3 124014119 124015454 - Fnbp1l protein_coding retained_intron MGP_WSBEiJ_T0013894.1 MGP_WSBEiJ_G0012024.1 mouse_genomes_project 3 122753345 122753766 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097366.1 MGP_WSBEiJ_G0036040.1 mouse_genomes_project 3 104752809 104755895 - Gm43256 sense_intronic sense_intronic MGP_WSBEiJ_T0060443.1 MGP_WSBEiJ_G0026618.1 mouse_genomes_project 3 87298804 87304330 + MGP_WSBEiJ_P0060443 Crabp2 protein_coding protein_coding MGP_WSBEiJ_T0060444.1 MGP_WSBEiJ_G0026618.1 mouse_genomes_project 3 87303097 87303939 + Crabp2 protein_coding retained_intron MGP_WSBEiJ_T0013731.1 MGP_WSBEiJ_G0011861.1 mouse_genomes_project 3 68319260 68319657 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007557.1 MGP_WSBEiJ_G0006187.1 mouse_genomes_project 3 119218580 119226784 + lincRNA lincRNA MGP_WSBEiJ_T0010339.1 MGP_WSBEiJ_G0008496.1 mouse_genomes_project 3 32885923 32886015 + Gm25442 miRNA miRNA MGP_WSBEiJ_T0001169.1 MGP_WSBEiJ_G0001099.1 mouse_genomes_project 3 50012840 50015065 - TEC TEC MGP_WSBEiJ_T0060483.1 MGP_WSBEiJ_G0026629.1 mouse_genomes_project 3 87647889 87666429 - MGP_WSBEiJ_P0060483 Tsacc protein_coding protein_coding MGP_WSBEiJ_T0060484.1 MGP_WSBEiJ_G0026629.1 mouse_genomes_project 3 87647892 87666268 - MGP_WSBEiJ_P0060484 Tsacc protein_coding protein_coding MGP_WSBEiJ_T0059755.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52892094 52898821 - MGP_WSBEiJ_P0059755 Exosc8 protein_coding protein_coding MGP_WSBEiJ_T0059756.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52892097 52892875 - Exosc8 protein_coding retained_intron MGP_WSBEiJ_T0059757.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52892098 52898465 - Exosc8 protein_coding retained_intron MGP_WSBEiJ_T0059758.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52893258 52898230 - Exosc8 protein_coding retained_intron MGP_WSBEiJ_T0059759.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52893270 52897741 - MGP_WSBEiJ_P0059759 Exosc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059760.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52894725 52898795 - Exosc8 protein_coding retained_intron MGP_WSBEiJ_T0059761.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52895420 52898474 - MGP_WSBEiJ_P0059761 Exosc8 protein_coding protein_coding MGP_WSBEiJ_T0059762.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52895569 52897765 - Exosc8 protein_coding retained_intron MGP_WSBEiJ_T0059763.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52895579 52896651 - Exosc8 protein_coding retained_intron MGP_WSBEiJ_T0059764.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52897028 52898463 - Exosc8 protein_coding retained_intron MGP_WSBEiJ_T0059765.1 MGP_WSBEiJ_G0026456.1 mouse_genomes_project 3 52897370 52898463 - Exosc8 protein_coding retained_intron MGP_WSBEiJ_T0098148.1 MGP_WSBEiJ_G0036811.1 mouse_genomes_project 3 16643755 16643919 + Gm23330 snRNA snRNA MGP_WSBEiJ_T0059150.1 MGP_WSBEiJ_G0026352.1 mouse_genomes_project 3 24585887 24592547 + MGP_WSBEiJ_P0059150 Ghsr protein_coding protein_coding MGP_WSBEiJ_T0061249.1 MGP_WSBEiJ_G0026807.1 mouse_genomes_project 3 95055964 95060971 + MGP_WSBEiJ_P0061249 protein_coding protein_coding MGP_WSBEiJ_T0061438.1 MGP_WSBEiJ_G0026839.1 mouse_genomes_project 3 95990191 96049423 - MGP_WSBEiJ_P0061438 Vps45 protein_coding protein_coding MGP_WSBEiJ_T0061439.1 MGP_WSBEiJ_G0026839.1 mouse_genomes_project 3 96036063 96048787 - Vps45 protein_coding retained_intron MGP_WSBEiJ_T0061440.1 MGP_WSBEiJ_G0026839.1 mouse_genomes_project 3 96047843 96048676 - Vps45 protein_coding processed_transcript MGP_WSBEiJ_T0060100.1 MGP_WSBEiJ_G0026537.1 mouse_genomes_project 3 67976419 68234326 + MGP_WSBEiJ_P0060100 Ppm1l protein_coding protein_coding MGP_WSBEiJ_T0060101.1 MGP_WSBEiJ_G0026537.1 mouse_genomes_project 3 68169251 68170013 + Ppm1l protein_coding retained_intron MGP_WSBEiJ_T0060102.1 MGP_WSBEiJ_G0026537.1 mouse_genomes_project 3 68214694 68226441 + Ppm1l protein_coding processed_transcript MGP_WSBEiJ_T0060103.1 MGP_WSBEiJ_G0026537.1 mouse_genomes_project 3 68222523 68226622 + Ppm1l protein_coding retained_intron MGP_WSBEiJ_T0059851.1 MGP_WSBEiJ_G0026475.1 mouse_genomes_project 3 56055964 56062149 - MGP_WSBEiJ_P0059851 Pfn2 protein_coding protein_coding MGP_WSBEiJ_T0059852.1 MGP_WSBEiJ_G0026475.1 mouse_genomes_project 3 56055974 56061215 - MGP_WSBEiJ_P0059852 Pfn2 protein_coding protein_coding MGP_WSBEiJ_T0059853.1 MGP_WSBEiJ_G0026475.1 mouse_genomes_project 3 56057177 56059948 - MGP_WSBEiJ_P0059853 Pfn2 protein_coding protein_coding MGP_WSBEiJ_T0059854.1 MGP_WSBEiJ_G0026475.1 mouse_genomes_project 3 56058730 56061619 - MGP_WSBEiJ_P0059854 Pfn2 protein_coding protein_coding MGP_WSBEiJ_T0007381.1 MGP_WSBEiJ_G0006052.1 mouse_genomes_project 3 32088107 32095058 - Gm42695 lincRNA lincRNA MGP_WSBEiJ_T0013599.1 MGP_WSBEiJ_G0011729.1 mouse_genomes_project 3 27110577 27110716 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013663.1 MGP_WSBEiJ_G0011793.1 mouse_genomes_project 3 47620430 47620661 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013930.1 MGP_WSBEiJ_G0012060.1 mouse_genomes_project 3 136849501 136850018 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001340.1 MGP_WSBEiJ_G0001269.1 mouse_genomes_project 3 153894377 153898808 - TEC TEC MGP_WSBEiJ_T0013693.1 MGP_WSBEiJ_G0011823.1 mouse_genomes_project 3 56911739 56914477 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062228.1 MGP_WSBEiJ_G0027035.1 mouse_genomes_project 3 114547197 114550234 - MGP_WSBEiJ_P0062228 protein_coding protein_coding MGP_WSBEiJ_T0060445.1 MGP_WSBEiJ_G0026619.1 mouse_genomes_project 3 87323930 87326244 + Nes protein_coding retained_intron MGP_WSBEiJ_T0060446.1 MGP_WSBEiJ_G0026619.1 mouse_genomes_project 3 87323945 87333304 + MGP_WSBEiJ_P0060446 Nes protein_coding protein_coding MGP_WSBEiJ_T0060447.1 MGP_WSBEiJ_G0026619.1 mouse_genomes_project 3 87323981 87333304 + MGP_WSBEiJ_P0060447 Nes protein_coding protein_coding MGP_WSBEiJ_T0013724.1 MGP_WSBEiJ_G0011854.1 mouse_genomes_project 3 65466749 65467538 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059047.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16307261 16402589 - MGP_WSBEiJ_P0059047 Pde7a protein_coding protein_coding MGP_WSBEiJ_T0059048.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16308835 16351770 - MGP_WSBEiJ_P0059048 Pde7a protein_coding protein_coding MGP_WSBEiJ_T0059049.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16311538 16314183 - Pde7a protein_coding retained_intron MGP_WSBEiJ_T0059050.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16311875 16317685 - Pde7a protein_coding processed_transcript MGP_WSBEiJ_T0059051.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16314443 16346987 - MGP_WSBEiJ_P0059051 Pde7a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059052.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16314515 16320331 - Pde7a protein_coding retained_intron MGP_WSBEiJ_T0059053.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16317960 16402320 - MGP_WSBEiJ_P0059053 Pde7a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059054.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16320282 16351727 - MGP_WSBEiJ_P0059054 Pde7a protein_coding protein_coding MGP_WSBEiJ_T0059055.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16343430 16402572 - Pde7a protein_coding retained_intron MGP_WSBEiJ_T0059056.1 MGP_WSBEiJ_G0026334.1 mouse_genomes_project 3 16343528 16402171 - Pde7a protein_coding processed_transcript MGP_WSBEiJ_T0060329.1 MGP_WSBEiJ_G0026594.1 mouse_genomes_project 3 85264124 85273918 - MGP_WSBEiJ_P0060329 Prss48 protein_coding protein_coding MGP_WSBEiJ_T0062932.1 MGP_WSBEiJ_G0027167.1 mouse_genomes_project 3 140602711 140637519 + MGP_WSBEiJ_P0062932 Eif4e protein_coding protein_coding MGP_WSBEiJ_T0062933.1 MGP_WSBEiJ_G0027167.1 mouse_genomes_project 3 140602957 140633221 + MGP_WSBEiJ_P0062933 Eif4e protein_coding protein_coding MGP_WSBEiJ_T0062934.1 MGP_WSBEiJ_G0027167.1 mouse_genomes_project 3 140603806 140634036 + MGP_WSBEiJ_P0062934 Eif4e protein_coding protein_coding MGP_WSBEiJ_T0062935.1 MGP_WSBEiJ_G0027167.1 mouse_genomes_project 3 140603806 140633380 + MGP_WSBEiJ_P0062935 Eif4e protein_coding protein_coding MGP_WSBEiJ_T0062936.1 MGP_WSBEiJ_G0027167.1 mouse_genomes_project 3 140603817 140633496 + MGP_WSBEiJ_P0062936 Eif4e protein_coding protein_coding MGP_WSBEiJ_T0062937.1 MGP_WSBEiJ_G0027167.1 mouse_genomes_project 3 140628668 140631533 + Eif4e protein_coding retained_intron MGP_WSBEiJ_T0004205.1 MGP_WSBEiJ_G0003695.1 mouse_genomes_project 3 89874605 89876270 - 4930537H20Rik antisense antisense MGP_WSBEiJ_T0013531.1 MGP_WSBEiJ_G0011661.1 mouse_genomes_project 3 4998792 5000644 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013513.1 MGP_WSBEiJ_G0011643.1 mouse_genomes_project 3 1039 1790 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004226.1 MGP_WSBEiJ_G0003709.1 mouse_genomes_project 3 96265800 96268834 - Gm20628 antisense antisense MGP_WSBEiJ_T0001130.1 MGP_WSBEiJ_G0001062.1 mouse_genomes_project 3 38645914 38649565 + TEC TEC MGP_WSBEiJ_T0001249.1 MGP_WSBEiJ_G0001179.1 mouse_genomes_project 3 107437277 107441807 + TEC TEC MGP_WSBEiJ_T0001140.1 MGP_WSBEiJ_G0001072.1 mouse_genomes_project 3 43222951 43226090 + TEC TEC MGP_WSBEiJ_T0059143.1 MGP_WSBEiJ_G0026350.1 mouse_genomes_project 3 24381000 24448455 + MGP_WSBEiJ_P0059143 Nceh1 protein_coding protein_coding MGP_WSBEiJ_T0059144.1 MGP_WSBEiJ_G0026350.1 mouse_genomes_project 3 24381039 24428037 + Nceh1 protein_coding retained_intron MGP_WSBEiJ_T0059145.1 MGP_WSBEiJ_G0026350.1 mouse_genomes_project 3 24381039 24487867 + MGP_WSBEiJ_P0059145 Nceh1 protein_coding protein_coding MGP_WSBEiJ_T0059146.1 MGP_WSBEiJ_G0026350.1 mouse_genomes_project 3 24381039 24423484 + MGP_WSBEiJ_P0059146 Nceh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059147.1 MGP_WSBEiJ_G0026350.1 mouse_genomes_project 3 24386476 24441317 + Nceh1 protein_coding processed_transcript MGP_WSBEiJ_T0059397.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33497614 33535999 - MGP_WSBEiJ_P0059397 Dcun1d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059398.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33497924 33535950 - MGP_WSBEiJ_P0059398 Dcun1d1 protein_coding protein_coding MGP_WSBEiJ_T0059399.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33497950 33524448 - MGP_WSBEiJ_P0059399 Dcun1d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059400.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33499617 33535497 - MGP_WSBEiJ_P0059400 Dcun1d1 protein_coding protein_coding MGP_WSBEiJ_T0059401.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33499681 33511397 - Dcun1d1 protein_coding processed_transcript MGP_WSBEiJ_T0059402.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33510695 33535978 - Dcun1d1 protein_coding processed_transcript MGP_WSBEiJ_T0059403.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33519402 33535987 - Dcun1d1 protein_coding retained_intron MGP_WSBEiJ_T0059404.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33522254 33533281 - MGP_WSBEiJ_P0059404 Dcun1d1 protein_coding protein_coding MGP_WSBEiJ_T0059405.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33522257 33540598 - MGP_WSBEiJ_P0059405 Dcun1d1 protein_coding protein_coding MGP_WSBEiJ_T0059406.1 MGP_WSBEiJ_G0026394.1 mouse_genomes_project 3 33531674 33534621 - Dcun1d1 protein_coding retained_intron MGP_WSBEiJ_T0099472.1 MGP_WSBEiJ_G0038135.1 mouse_genomes_project 3 121973680 121973808 - Gm25013 snoRNA snoRNA MGP_WSBEiJ_T0007660.1 MGP_WSBEiJ_G0006267.1 mouse_genomes_project 3 154826874 154831614 + Gm43619 lincRNA lincRNA MGP_WSBEiJ_T0097209.1 MGP_WSBEiJ_G0035890.1 mouse_genomes_project 3 61561728 61561870 + Gm22433 scaRNA scaRNA MGP_WSBEiJ_T0061025.1 MGP_WSBEiJ_G0026727.1 mouse_genomes_project 3 91792461 91795333 - MGP_WSBEiJ_P0061025 Lor protein_coding protein_coding MGP_WSBEiJ_T0060992.1 MGP_WSBEiJ_G0026714.1 mouse_genomes_project 3 90150051 90155967 + MGP_WSBEiJ_P0060992 S100a16 protein_coding protein_coding MGP_WSBEiJ_T0060993.1 MGP_WSBEiJ_G0026714.1 mouse_genomes_project 3 90150112 90155833 + MGP_WSBEiJ_P0060993 S100a16 protein_coding protein_coding MGP_WSBEiJ_T0060994.1 MGP_WSBEiJ_G0026714.1 mouse_genomes_project 3 90150122 90155554 + S100a16 protein_coding processed_transcript MGP_WSBEiJ_T0060995.1 MGP_WSBEiJ_G0026714.1 mouse_genomes_project 3 90151684 90155746 + MGP_WSBEiJ_P0060995 S100a16 protein_coding protein_coding MGP_WSBEiJ_T0060996.1 MGP_WSBEiJ_G0026714.1 mouse_genomes_project 3 90152086 90155248 + MGP_WSBEiJ_P0060996 S100a16 protein_coding protein_coding MGP_WSBEiJ_T0060997.1 MGP_WSBEiJ_G0026714.1 mouse_genomes_project 3 90153956 90155567 + MGP_WSBEiJ_P0060997 S100a16 protein_coding protein_coding MGP_WSBEiJ_T0060998.1 MGP_WSBEiJ_G0026714.1 mouse_genomes_project 3 90153959 90155681 + MGP_WSBEiJ_P0060998 S100a16 protein_coding protein_coding MGP_WSBEiJ_T0060999.1 MGP_WSBEiJ_G0026714.1 mouse_genomes_project 3 90153971 90155970 + MGP_WSBEiJ_P0060999 S100a16 protein_coding protein_coding MGP_WSBEiJ_T0013882.1 MGP_WSBEiJ_G0012012.1 mouse_genomes_project 3 118012111 118012496 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004318.1 MGP_WSBEiJ_G0003767.1 mouse_genomes_project 3 145036141 145037161 - Gm15540 antisense antisense MGP_WSBEiJ_T0013667.1 MGP_WSBEiJ_G0011797.1 mouse_genomes_project 3 47798073 47798536 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059860.1 MGP_WSBEiJ_G0026478.1 mouse_genomes_project 3 56757328 56791309 + MGP_WSBEiJ_P0059860 Eif2a protein_coding protein_coding MGP_WSBEiJ_T0059861.1 MGP_WSBEiJ_G0026478.1 mouse_genomes_project 3 56757549 56779163 + Eif2a protein_coding retained_intron MGP_WSBEiJ_T0059862.1 MGP_WSBEiJ_G0026478.1 mouse_genomes_project 3 56757550 56789452 + MGP_WSBEiJ_P0059862 Eif2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059863.1 MGP_WSBEiJ_G0026478.1 mouse_genomes_project 3 56757563 56791309 + MGP_WSBEiJ_P0059863 Eif2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059864.1 MGP_WSBEiJ_G0026478.1 mouse_genomes_project 3 56757810 56778958 + MGP_WSBEiJ_P0059864 Eif2a protein_coding protein_coding MGP_WSBEiJ_T0059865.1 MGP_WSBEiJ_G0026478.1 mouse_genomes_project 3 56775358 56779163 + Eif2a protein_coding retained_intron MGP_WSBEiJ_T0059866.1 MGP_WSBEiJ_G0026478.1 mouse_genomes_project 3 56777578 56784418 + Eif2a protein_coding retained_intron MGP_WSBEiJ_T0010383.1 MGP_WSBEiJ_G0008540.1 mouse_genomes_project 3 131442225 131442384 - Gm24515 miRNA miRNA MGP_WSBEiJ_T0060164.1 MGP_WSBEiJ_G0026553.1 mouse_genomes_project 3 78370686 78464041 + MGP_WSBEiJ_P0060164 protein_coding protein_coding MGP_WSBEiJ_T0060165.1 MGP_WSBEiJ_G0026553.1 mouse_genomes_project 3 78381439 78500588 + MGP_WSBEiJ_P0060165 protein_coding protein_coding MGP_WSBEiJ_T0060166.1 MGP_WSBEiJ_G0026553.1 mouse_genomes_project 3 78381442 78465299 + MGP_WSBEiJ_P0060166 protein_coding protein_coding MGP_WSBEiJ_T0013674.1 MGP_WSBEiJ_G0011804.1 mouse_genomes_project 3 49647034 49647461 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062953.1 MGP_WSBEiJ_G0027170.1 mouse_genomes_project 3 141316621 141824505 + MGP_WSBEiJ_P0062953 Stpg2 protein_coding protein_coding MGP_WSBEiJ_T0062954.1 MGP_WSBEiJ_G0027170.1 mouse_genomes_project 3 141316816 141825194 + MGP_WSBEiJ_P0062954 Stpg2 protein_coding protein_coding MGP_WSBEiJ_T0007522.1 MGP_WSBEiJ_G0006158.1 mouse_genomes_project 3 102139376 102148119 + Gm43135 lincRNA lincRNA MGP_WSBEiJ_T0060752.1 MGP_WSBEiJ_G0026669.1 mouse_genomes_project 3 88727589 88728818 + Krtcap2 protein_coding retained_intron MGP_WSBEiJ_T0060753.1 MGP_WSBEiJ_G0026669.1 mouse_genomes_project 3 88727589 88731530 + MGP_WSBEiJ_P0060753 Krtcap2 protein_coding protein_coding MGP_WSBEiJ_T0060754.1 MGP_WSBEiJ_G0026669.1 mouse_genomes_project 3 88728057 88731333 + MGP_WSBEiJ_P0060754 Krtcap2 protein_coding protein_coding MGP_WSBEiJ_T0060755.1 MGP_WSBEiJ_G0026669.1 mouse_genomes_project 3 88730486 88731346 + Krtcap2 protein_coding retained_intron MGP_WSBEiJ_T0004315.1 MGP_WSBEiJ_G0003764.1 mouse_genomes_project 3 140336573 140362888 - Gm16559 antisense antisense MGP_WSBEiJ_T0001368.1 MGP_WSBEiJ_G0001297.1 mouse_genomes_project 3 162880756 162884087 + TEC TEC MGP_WSBEiJ_T0061028.1 MGP_WSBEiJ_G0026730.1 mouse_genomes_project 3 91924526 91929389 + MGP_WSBEiJ_P0061028 protein_coding protein_coding MGP_WSBEiJ_T0013745.1 MGP_WSBEiJ_G0011875.1 mouse_genomes_project 3 73117782 73118574 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017387.1 MGP_WSBEiJ_G0014937.1 mouse_genomes_project 3 105357925 105378982 - Gm43584 processed_transcript processed_transcript MGP_WSBEiJ_T0060495.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87694531 87700825 + MGP_WSBEiJ_P0060495 Glmp protein_coding protein_coding MGP_WSBEiJ_T0060496.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87694563 87699020 + Glmp protein_coding retained_intron MGP_WSBEiJ_T0060497.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87694566 87696087 + Glmp protein_coding retained_intron MGP_WSBEiJ_T0060498.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87694568 87697096 + Glmp protein_coding retained_intron MGP_WSBEiJ_T0060499.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87694580 87695976 + MGP_WSBEiJ_P0060499 Glmp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060500.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87694590 87697872 + MGP_WSBEiJ_P0060500 Glmp protein_coding protein_coding MGP_WSBEiJ_T0060501.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87694590 87697877 + MGP_WSBEiJ_P0060501 Glmp protein_coding protein_coding MGP_WSBEiJ_T0060502.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87694590 87697877 + MGP_WSBEiJ_P0060502 Glmp protein_coding protein_coding MGP_WSBEiJ_T0060503.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87695552 87697827 + Glmp protein_coding retained_intron MGP_WSBEiJ_T0060504.1 MGP_WSBEiJ_G0026631.1 mouse_genomes_project 3 87697581 87698090 + MGP_WSBEiJ_P0060504 Glmp protein_coding protein_coding MGP_WSBEiJ_T0007466.1 MGP_WSBEiJ_G0006116.1 mouse_genomes_project 3 79347242 79398036 - Gm37971 lincRNA lincRNA MGP_WSBEiJ_T0098216.1 MGP_WSBEiJ_G0036879.1 mouse_genomes_project 3 134372774 134372880 - Gm25307 snRNA snRNA MGP_WSBEiJ_T0010372.1 MGP_WSBEiJ_G0008529.1 mouse_genomes_project 3 117094375 117094429 + Mir669n miRNA miRNA MGP_WSBEiJ_T0011340.1 MGP_WSBEiJ_G0009497.1 mouse_genomes_project 3 71060103 71060194 + Gm27465 misc_RNA misc_RNA MGP_WSBEiJ_T0098213.1 MGP_WSBEiJ_G0036876.1 mouse_genomes_project 3 125921117 125921227 + Gm22575 snRNA snRNA MGP_WSBEiJ_T0098188.1 MGP_WSBEiJ_G0036851.1 mouse_genomes_project 3 90161351 90161457 + Gm24593 snRNA snRNA MGP_WSBEiJ_T0013695.1 MGP_WSBEiJ_G0011825.1 mouse_genomes_project 3 57703152 57704964 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013760.1 MGP_WSBEiJ_G0011890.1 mouse_genomes_project 3 77877101 77877768 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007457.1 MGP_WSBEiJ_G0006110.1 mouse_genomes_project 3 74539286 74547485 - Platr10 lincRNA lincRNA MGP_WSBEiJ_T0007458.1 MGP_WSBEiJ_G0006110.1 mouse_genomes_project 3 74539680 74540496 - Platr10 lincRNA lincRNA MGP_WSBEiJ_T0063163.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151452706 151465688 - MGP_WSBEiJ_P0063163 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063164.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151452709 151596094 - MGP_WSBEiJ_P0063164 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063165.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151452978 151460911 - MGP_WSBEiJ_P0063165 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063166.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151452979 151460119 - MGP_WSBEiJ_P0063166 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063167.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151453199 151595993 - MGP_WSBEiJ_P0063167 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063168.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151453216 151633223 - MGP_WSBEiJ_P0063168 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063169.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151453216 151633223 - MGP_WSBEiJ_P0063169 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063170.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454063 151596109 - MGP_WSBEiJ_P0063170 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063171.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454216 151596122 - MGP_WSBEiJ_P0063171 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063172.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454216 151596122 - MGP_WSBEiJ_P0063172 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063173.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454216 151596122 - MGP_WSBEiJ_P0063173 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063174.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454216 151596122 - MGP_WSBEiJ_P0063174 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063175.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454297 151500205 - MGP_WSBEiJ_P0063175 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063176.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454845 151471068 - MGP_WSBEiJ_P0063176 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063177.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454868 151474367 - MGP_WSBEiJ_P0063177 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063178.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151454887 151463536 - MGP_WSBEiJ_P0063178 Adgrl2 protein_coding protein_coding MGP_WSBEiJ_T0063179.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151457459 151462314 - Adgrl2 protein_coding retained_intron MGP_WSBEiJ_T0063180.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151464311 151474501 - Adgrl2 protein_coding retained_intron MGP_WSBEiJ_T0063181.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151501022 151595970 - MGP_WSBEiJ_P0063181 Adgrl2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0063182.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151528517 151631980 - Adgrl2 protein_coding retained_intron MGP_WSBEiJ_T0063183.1 MGP_WSBEiJ_G0027215.1 mouse_genomes_project 3 151595294 151632150 - Adgrl2 protein_coding retained_intron MGP_WSBEiJ_T0062845.1 MGP_WSBEiJ_G0027146.1 mouse_genomes_project 3 137893547 137896732 - MGP_WSBEiJ_P0062845 Scoc protein_coding protein_coding MGP_WSBEiJ_T0061821.1 MGP_WSBEiJ_G0026939.1 mouse_genomes_project 3 104364762 104380222 + MGP_WSBEiJ_P0061821 Bcl2l15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0061822.1 MGP_WSBEiJ_G0026939.1 mouse_genomes_project 3 104366819 104374096 + MGP_WSBEiJ_P0061822 Bcl2l15 protein_coding protein_coding MGP_WSBEiJ_T0061823.1 MGP_WSBEiJ_G0026939.1 mouse_genomes_project 3 104366989 104391199 + MGP_WSBEiJ_P0061823 Bcl2l15 protein_coding protein_coding MGP_WSBEiJ_T0061824.1 MGP_WSBEiJ_G0026939.1 mouse_genomes_project 3 104383583 104390419 + Bcl2l15 protein_coding processed_transcript MGP_WSBEiJ_T0061825.1 MGP_WSBEiJ_G0026939.1 mouse_genomes_project 3 104388581 104390281 + Bcl2l15 protein_coding processed_transcript MGP_WSBEiJ_T0100278.1 MGP_WSBEiJ_G0038795.1 mouse_genomes_project 3 129113541 129115954 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0059589.1 MGP_WSBEiJ_G0026427.1 mouse_genomes_project 3 38711161 38729342 - MGP_WSBEiJ_P0059589 Pgrmc2 protein_coding protein_coding MGP_WSBEiJ_T0059590.1 MGP_WSBEiJ_G0026427.1 mouse_genomes_project 3 38713355 38715504 - Pgrmc2 protein_coding retained_intron MGP_WSBEiJ_T0061549.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97254591 97275509 + MGP_WSBEiJ_P0061549 Acp6 protein_coding protein_coding MGP_WSBEiJ_T0061550.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97254910 97256210 + Acp6 protein_coding retained_intron MGP_WSBEiJ_T0061551.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97254917 97267238 + Acp6 protein_coding retained_intron MGP_WSBEiJ_T0061552.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97254917 97265974 + Acp6 protein_coding retained_intron MGP_WSBEiJ_T0061553.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97266304 97267380 + Acp6 protein_coding retained_intron MGP_WSBEiJ_T0061554.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97267021 97272794 + Acp6 protein_coding retained_intron MGP_WSBEiJ_T0061555.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97270078 97272823 + Acp6 protein_coding retained_intron MGP_WSBEiJ_T0061556.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97271570 97275453 + Acp6 protein_coding retained_intron MGP_WSBEiJ_T0061557.1 MGP_WSBEiJ_G0026875.1 mouse_genomes_project 3 97272933 97276234 + Acp6 protein_coding retained_intron MGP_WSBEiJ_T0010381.1 MGP_WSBEiJ_G0008538.1 mouse_genomes_project 3 129187528 129187594 + Mir302d miRNA miRNA MGP_WSBEiJ_T0004324.1 MGP_WSBEiJ_G0003772.1 mouse_genomes_project 3 154953391 154954338 + Gm43455 antisense antisense MGP_WSBEiJ_T0004325.1 MGP_WSBEiJ_G0003772.1 mouse_genomes_project 3 154953612 154954338 + Gm43455 antisense antisense MGP_WSBEiJ_T0004241.1 MGP_WSBEiJ_G0003720.1 mouse_genomes_project 3 104302708 104305176 + Gm15886 antisense antisense MGP_WSBEiJ_T0004242.1 MGP_WSBEiJ_G0003720.1 mouse_genomes_project 3 104302729 104319898 + Gm15886 antisense antisense MGP_WSBEiJ_T0004243.1 MGP_WSBEiJ_G0003720.1 mouse_genomes_project 3 104303064 104308737 + Gm15886 antisense antisense MGP_WSBEiJ_T0004244.1 MGP_WSBEiJ_G0003720.1 mouse_genomes_project 3 104308155 104309148 + Gm15886 antisense antisense MGP_WSBEiJ_T0098152.1 MGP_WSBEiJ_G0036815.1 mouse_genomes_project 3 37365263 37365423 + Gm23796 snRNA snRNA MGP_WSBEiJ_T0001256.1 MGP_WSBEiJ_G0001186.1 mouse_genomes_project 3 111510284 111512746 + TEC TEC MGP_WSBEiJ_T0007500.1 MGP_WSBEiJ_G0006137.1 mouse_genomes_project 3 91888429 91896899 + Gm43740 lincRNA lincRNA MGP_WSBEiJ_T0059245.1 MGP_WSBEiJ_G0026370.1 mouse_genomes_project 3 28261126 28285051 + Gpr160 protein_coding retained_intron MGP_WSBEiJ_T0059246.1 MGP_WSBEiJ_G0026370.1 mouse_genomes_project 3 28261126 28304366 + MGP_WSBEiJ_P0059246 Gpr160 protein_coding protein_coding MGP_WSBEiJ_T0059247.1 MGP_WSBEiJ_G0026370.1 mouse_genomes_project 3 28261126 28304366 + MGP_WSBEiJ_P0059247 Gpr160 protein_coding protein_coding MGP_WSBEiJ_T0059248.1 MGP_WSBEiJ_G0026370.1 mouse_genomes_project 3 28261126 28304368 + MGP_WSBEiJ_P0059248 Gpr160 protein_coding protein_coding MGP_WSBEiJ_T0059249.1 MGP_WSBEiJ_G0026370.1 mouse_genomes_project 3 28261165 28304366 + MGP_WSBEiJ_P0059249 Gpr160 protein_coding protein_coding MGP_WSBEiJ_T0059250.1 MGP_WSBEiJ_G0026370.1 mouse_genomes_project 3 28261169 28302968 + MGP_WSBEiJ_P0059250 Gpr160 protein_coding protein_coding MGP_WSBEiJ_T0059251.1 MGP_WSBEiJ_G0026370.1 mouse_genomes_project 3 28261191 28304366 + MGP_WSBEiJ_P0059251 Gpr160 protein_coding protein_coding MGP_WSBEiJ_T0059252.1 MGP_WSBEiJ_G0026370.1 mouse_genomes_project 3 28261319 28302997 + MGP_WSBEiJ_P0059252 Gpr160 protein_coding protein_coding MGP_WSBEiJ_T0007390.1 MGP_WSBEiJ_G0006060.1 mouse_genomes_project 3 34145342 34152159 - Gm11549 lincRNA lincRNA MGP_WSBEiJ_T0063118.1 MGP_WSBEiJ_G0027206.1 mouse_genomes_project 3 149005377 149018477 - MGP_WSBEiJ_P0063118 Spata1 protein_coding protein_coding MGP_WSBEiJ_T0063119.1 MGP_WSBEiJ_G0027206.1 mouse_genomes_project 3 149005383 149048706 - MGP_WSBEiJ_P0063119 Spata1 protein_coding protein_coding MGP_WSBEiJ_T0063120.1 MGP_WSBEiJ_G0027206.1 mouse_genomes_project 3 149005384 149054658 - MGP_WSBEiJ_P0063120 Spata1 protein_coding protein_coding MGP_WSBEiJ_T0063121.1 MGP_WSBEiJ_G0027206.1 mouse_genomes_project 3 149014686 149031579 - MGP_WSBEiJ_P0063121 Spata1 protein_coding protein_coding MGP_WSBEiJ_T0063122.1 MGP_WSBEiJ_G0027206.1 mouse_genomes_project 3 149018363 149037522 - Spata1 protein_coding processed_transcript MGP_WSBEiJ_T0063123.1 MGP_WSBEiJ_G0027206.1 mouse_genomes_project 3 149025626 149054614 - Spata1 protein_coding processed_transcript MGP_WSBEiJ_T0063124.1 MGP_WSBEiJ_G0027206.1 mouse_genomes_project 3 149039411 149049976 - MGP_WSBEiJ_P0063124 Spata1 protein_coding protein_coding MGP_WSBEiJ_T0061985.1 MGP_WSBEiJ_G0026975.1 mouse_genomes_project 3 107463563 107493173 - MGP_WSBEiJ_P0061985 Cd53 protein_coding protein_coding MGP_WSBEiJ_T0061986.1 MGP_WSBEiJ_G0026975.1 mouse_genomes_project 3 107463569 107493127 - MGP_WSBEiJ_P0061986 Cd53 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062212.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110641246 111013636 - MGP_WSBEiJ_P0062212 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0062213.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110641252 111014643 - MGP_WSBEiJ_P0062213 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0062214.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110642321 111014107 - MGP_WSBEiJ_P0062214 Ntng1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062215.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110643888 111006143 - MGP_WSBEiJ_P0062215 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0062216.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110643888 111006143 - MGP_WSBEiJ_P0062216 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0062217.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110643888 111006143 - MGP_WSBEiJ_P0062217 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0062218.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110643888 111014708 - MGP_WSBEiJ_P0062218 Ntng1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062219.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110643888 111006143 - MGP_WSBEiJ_P0062219 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0062220.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110643888 111006143 - MGP_WSBEiJ_P0062220 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0062221.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110643888 111006143 - MGP_WSBEiJ_P0062221 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0062222.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110693252 110695560 - Ntng1 protein_coding retained_intron MGP_WSBEiJ_T0062223.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 110693252 111006103 - Ntng1 protein_coding retained_intron MGP_WSBEiJ_T0062224.1 MGP_WSBEiJ_G0027033.1 mouse_genomes_project 3 111014316 111014643 - MGP_WSBEiJ_P0062224 Ntng1 protein_coding protein_coding MGP_WSBEiJ_T0059448.1 MGP_WSBEiJ_G0026404.1 mouse_genomes_project 3 34203938 34218929 - MGP_WSBEiJ_P0059448 Bbs7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0059449.1 MGP_WSBEiJ_G0026404.1 mouse_genomes_project 3 34203940 34245314 - MGP_WSBEiJ_P0059449 Bbs7 protein_coding protein_coding MGP_WSBEiJ_T0059450.1 MGP_WSBEiJ_G0026404.1 mouse_genomes_project 3 34203940 34245402 - MGP_WSBEiJ_P0059450 Bbs7 protein_coding protein_coding MGP_WSBEiJ_T0059451.1 MGP_WSBEiJ_G0026404.1 mouse_genomes_project 3 34205671 34245210 - MGP_WSBEiJ_P0059451 Bbs7 protein_coding protein_coding MGP_WSBEiJ_T0059452.1 MGP_WSBEiJ_G0026404.1 mouse_genomes_project 3 34206582 34208094 - Bbs7 protein_coding retained_intron MGP_WSBEiJ_T0059453.1 MGP_WSBEiJ_G0026404.1 mouse_genomes_project 3 34241568 34245314 - Bbs7 protein_coding retained_intron MGP_WSBEiJ_T0059454.1 MGP_WSBEiJ_G0026404.1 mouse_genomes_project 3 34242395 34245314 - MGP_WSBEiJ_P0059454 Bbs7 protein_coding protein_coding MGP_WSBEiJ_T0062143.1 MGP_WSBEiJ_G0027019.1 mouse_genomes_project 3 109369462 109380841 + Taf13 protein_coding processed_transcript MGP_WSBEiJ_T0062144.1 MGP_WSBEiJ_G0027019.1 mouse_genomes_project 3 109369463 109381212 + Taf13 protein_coding processed_transcript MGP_WSBEiJ_T0062145.1 MGP_WSBEiJ_G0027019.1 mouse_genomes_project 3 109369475 109371068 + Taf13 protein_coding retained_intron MGP_WSBEiJ_T0062146.1 MGP_WSBEiJ_G0027019.1 mouse_genomes_project 3 109369486 109380586 + MGP_WSBEiJ_P0062146 Taf13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0007544.1 MGP_WSBEiJ_G0006175.1 mouse_genomes_project 3 108938705 108959697 + Gm12524 lincRNA lincRNA MGP_WSBEiJ_T0060131.1 MGP_WSBEiJ_G0026546.1 mouse_genomes_project 3 74128045 74161666 - MGP_WSBEiJ_P0060131 Serpini2 protein_coding protein_coding MGP_WSBEiJ_T0099461.1 MGP_WSBEiJ_G0038124.1 mouse_genomes_project 3 100667047 100667124 + Gm25802 snoRNA snoRNA MGP_WSBEiJ_T0013854.1 MGP_WSBEiJ_G0011984.1 mouse_genomes_project 3 108757079 108757482 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004157.1 MGP_WSBEiJ_G0003660.1 mouse_genomes_project 3 50006216 50015288 + Gm20089 antisense antisense MGP_WSBEiJ_T0001315.1 MGP_WSBEiJ_G0001244.1 mouse_genomes_project 3 132706316 132707027 + TEC TEC MGP_WSBEiJ_T0001088.1 MGP_WSBEiJ_G0001020.1 mouse_genomes_project 3 22274916 22275110 + TEC TEC MGP_WSBEiJ_T0061723.1 MGP_WSBEiJ_G0026922.1 mouse_genomes_project 3 103305889 103429039 - MGP_WSBEiJ_P0061723 protein_coding protein_coding MGP_WSBEiJ_T0061724.1 MGP_WSBEiJ_G0026922.1 mouse_genomes_project 3 103306095 103308073 - protein_coding processed_transcript MGP_WSBEiJ_T0061725.1 MGP_WSBEiJ_G0026922.1 mouse_genomes_project 3 103306131 103429039 - MGP_WSBEiJ_P0061725 protein_coding protein_coding MGP_WSBEiJ_T0061726.1 MGP_WSBEiJ_G0026922.1 mouse_genomes_project 3 103414793 103429029 - MGP_WSBEiJ_P0061726 protein_coding protein_coding MGP_WSBEiJ_T0013694.1 MGP_WSBEiJ_G0011824.1 mouse_genomes_project 3 56926794 56927765 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013625.1 MGP_WSBEiJ_G0011755.1 mouse_genomes_project 3 35268902 35269546 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007367.1 MGP_WSBEiJ_G0006039.1 mouse_genomes_project 3 20140860 20143816 + Gm37021 lincRNA lincRNA MGP_WSBEiJ_T0013909.1 MGP_WSBEiJ_G0012039.1 mouse_genomes_project 3 129149752 129150098 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013536.1 MGP_WSBEiJ_G0011666.1 mouse_genomes_project 3 5868175 5868497 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017428.1 MGP_WSBEiJ_G0014951.1 mouse_genomes_project 3 151648169 151650116 + Gm43572 processed_transcript processed_transcript MGP_WSBEiJ_T0061305.1 MGP_WSBEiJ_G0026817.1 mouse_genomes_project 3 95231715 95242396 - MGP_WSBEiJ_P0061305 Anxa9 protein_coding protein_coding MGP_WSBEiJ_T0061306.1 MGP_WSBEiJ_G0026817.1 mouse_genomes_project 3 95231715 95242768 - MGP_WSBEiJ_P0061306 Anxa9 protein_coding protein_coding MGP_WSBEiJ_T0061307.1 MGP_WSBEiJ_G0026817.1 mouse_genomes_project 3 95231917 95242396 - MGP_WSBEiJ_P0061307 Anxa9 protein_coding protein_coding MGP_WSBEiJ_T0061308.1 MGP_WSBEiJ_G0026817.1 mouse_genomes_project 3 95241524 95242396 - MGP_WSBEiJ_P0061308 Anxa9 protein_coding protein_coding MGP_WSBEiJ_T0001200.1 MGP_WSBEiJ_G0001130.1 mouse_genomes_project 3 64052250 64053199 - TEC TEC MGP_WSBEiJ_T0061539.1 MGP_WSBEiJ_G0026872.1 mouse_genomes_project 3 96946899 96987857 - MGP_WSBEiJ_P0061539 Gpr89 protein_coding protein_coding MGP_WSBEiJ_T0061540.1 MGP_WSBEiJ_G0026872.1 mouse_genomes_project 3 96947209 96975434 - Gpr89 protein_coding processed_transcript MGP_WSBEiJ_T0061541.1 MGP_WSBEiJ_G0026872.1 mouse_genomes_project 3 96950104 96955948 - Gpr89 protein_coding retained_intron MGP_WSBEiJ_T0061542.1 MGP_WSBEiJ_G0026872.1 mouse_genomes_project 3 96960333 96981058 - Gpr89 protein_coding processed_transcript MGP_WSBEiJ_T0061543.1 MGP_WSBEiJ_G0026872.1 mouse_genomes_project 3 96964030 96979947 - Gpr89 protein_coding processed_transcript MGP_WSBEiJ_T0061544.1 MGP_WSBEiJ_G0026872.1 mouse_genomes_project 3 96964030 96987823 - MGP_WSBEiJ_P0061544 Gpr89 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062778.1 MGP_WSBEiJ_G0027137.1 mouse_genomes_project 3 137088284 137151315 + MGP_WSBEiJ_P0062778 Cenpe protein_coding protein_coding MGP_WSBEiJ_T0062779.1 MGP_WSBEiJ_G0027137.1 mouse_genomes_project 3 137118420 137122889 + MGP_WSBEiJ_P0062779 Cenpe protein_coding protein_coding MGP_WSBEiJ_T0062780.1 MGP_WSBEiJ_G0027137.1 mouse_genomes_project 3 137136937 137137377 + Cenpe protein_coding retained_intron MGP_WSBEiJ_T0062781.1 MGP_WSBEiJ_G0027137.1 mouse_genomes_project 3 137137740 137143870 + Cenpe protein_coding retained_intron MGP_WSBEiJ_T0062782.1 MGP_WSBEiJ_G0027137.1 mouse_genomes_project 3 137148316 137148848 + Cenpe protein_coding retained_intron MGP_WSBEiJ_T0062067.1 MGP_WSBEiJ_G0027001.1 mouse_genomes_project 3 108804433 108808701 - MGP_WSBEiJ_P0062067 Gstm4 protein_coding protein_coding MGP_WSBEiJ_T0001225.1 MGP_WSBEiJ_G0001155.1 mouse_genomes_project 3 88141364 88142304 - TEC TEC MGP_WSBEiJ_T0007513.1 MGP_WSBEiJ_G0006149.1 mouse_genomes_project 3 96419891 96420756 - 4930477E14Rik lincRNA lincRNA MGP_WSBEiJ_T0061717.1 MGP_WSBEiJ_G0026921.1 mouse_genomes_project 3 103255842 103260245 - Tshb protein_coding retained_intron MGP_WSBEiJ_T0061718.1 MGP_WSBEiJ_G0026921.1 mouse_genomes_project 3 103257775 103262739 - MGP_WSBEiJ_P0061718 Tshb protein_coding protein_coding MGP_WSBEiJ_T0061719.1 MGP_WSBEiJ_G0026921.1 mouse_genomes_project 3 103257775 103262699 - MGP_WSBEiJ_P0061719 Tshb protein_coding protein_coding MGP_WSBEiJ_T0061720.1 MGP_WSBEiJ_G0026921.1 mouse_genomes_project 3 103257784 103262743 - MGP_WSBEiJ_P0061720 Tshb protein_coding protein_coding MGP_WSBEiJ_T0061721.1 MGP_WSBEiJ_G0026921.1 mouse_genomes_project 3 103257796 103262699 - MGP_WSBEiJ_P0061721 Tshb protein_coding protein_coding MGP_WSBEiJ_T0061722.1 MGP_WSBEiJ_G0026921.1 mouse_genomes_project 3 103257823 103262508 - MGP_WSBEiJ_P0061722 Tshb protein_coding protein_coding MGP_WSBEiJ_T0001299.1 MGP_WSBEiJ_G0001229.1 mouse_genomes_project 3 128886566 128892330 - TEC TEC MGP_WSBEiJ_T0061882.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105474751 105477206 + St7l protein_coding retained_intron MGP_WSBEiJ_T0061883.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105475249 105543271 + MGP_WSBEiJ_P0061883 St7l protein_coding protein_coding MGP_WSBEiJ_T0061884.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105475249 105547467 + MGP_WSBEiJ_P0061884 St7l protein_coding protein_coding MGP_WSBEiJ_T0061885.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105475813 105545186 + MGP_WSBEiJ_P0061885 St7l protein_coding protein_coding MGP_WSBEiJ_T0061886.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105475817 105545310 + MGP_WSBEiJ_P0061886 St7l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061887.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105475826 105504451 + MGP_WSBEiJ_P0061887 St7l protein_coding protein_coding MGP_WSBEiJ_T0061888.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105475859 105504383 + St7l protein_coding processed_transcript MGP_WSBEiJ_T0061889.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105484205 105535960 + MGP_WSBEiJ_P0061889 St7l protein_coding protein_coding MGP_WSBEiJ_T0061890.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105484228 105497453 + St7l protein_coding processed_transcript MGP_WSBEiJ_T0061891.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105497356 105535948 + MGP_WSBEiJ_P0061891 St7l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061892.1 MGP_WSBEiJ_G0026951.1 mouse_genomes_project 3 105503968 105510632 + St7l protein_coding retained_intron MGP_WSBEiJ_T0098223.1 MGP_WSBEiJ_G0036886.1 mouse_genomes_project 3 148639493 148639646 - Gm25627 snRNA snRNA MGP_WSBEiJ_T0013600.1 MGP_WSBEiJ_G0011730.1 mouse_genomes_project 3 27283549 27283988 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013887.1 MGP_WSBEiJ_G0012017.1 mouse_genomes_project 3 118439960 118440338 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007342.1 MGP_WSBEiJ_G0006023.1 mouse_genomes_project 3 8747692 8769865 - Gm10745 lincRNA lincRNA MGP_WSBEiJ_T0098189.1 MGP_WSBEiJ_G0036852.1 mouse_genomes_project 3 90176708 90176855 - Gm23464 snRNA snRNA MGP_WSBEiJ_T0013741.1 MGP_WSBEiJ_G0011871.1 mouse_genomes_project 3 70797833 70798338 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013951.1 MGP_WSBEiJ_G0012081.1 mouse_genomes_project 3 142255041 142256422 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007600.1 MGP_WSBEiJ_G0006220.1 mouse_genomes_project 3 138390529 138404432 - 1700030L20Rik lincRNA lincRNA MGP_WSBEiJ_T0004182.1 MGP_WSBEiJ_G0003680.1 mouse_genomes_project 3 79258391 79261498 - Gm37892 antisense antisense MGP_WSBEiJ_T0013773.1 MGP_WSBEiJ_G0011903.1 mouse_genomes_project 3 85181110 85181398 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001291.1 MGP_WSBEiJ_G0001221.1 mouse_genomes_project 3 128578204 128579244 - TEC TEC MGP_WSBEiJ_T0063026.1 MGP_WSBEiJ_G0027184.1 mouse_genomes_project 3 146800270 146945888 - MGP_WSBEiJ_P0063026 Hs2st1 protein_coding protein_coding MGP_WSBEiJ_T0063027.1 MGP_WSBEiJ_G0027184.1 mouse_genomes_project 3 146824660 146945594 - MGP_WSBEiJ_P0063027 Hs2st1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063028.1 MGP_WSBEiJ_G0027184.1 mouse_genomes_project 3 146943549 146945865 - Hs2st1 protein_coding retained_intron MGP_WSBEiJ_T0004316.1 MGP_WSBEiJ_G0003765.1 mouse_genomes_project 3 143653505 143660792 - Gm15688 antisense antisense MGP_WSBEiJ_T0007398.1 MGP_WSBEiJ_G0006067.1 mouse_genomes_project 3 36048489 36052752 + Gm42920 lincRNA lincRNA MGP_WSBEiJ_T0100759.1 MGP_WSBEiJ_G0039217.1 mouse_genomes_project 3 57789943 57902735 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001322.1 MGP_WSBEiJ_G0001251.1 mouse_genomes_project 3 134896276 134898047 - TEC TEC MGP_WSBEiJ_T0063035.1 MGP_WSBEiJ_G0027186.1 mouse_genomes_project 3 147055663 147092235 - MGP_WSBEiJ_P0063035 Sh3glb1 protein_coding protein_coding MGP_WSBEiJ_T0063036.1 MGP_WSBEiJ_G0027186.1 mouse_genomes_project 3 147056880 147069491 - MGP_WSBEiJ_P0063036 Sh3glb1 protein_coding protein_coding MGP_WSBEiJ_T0063037.1 MGP_WSBEiJ_G0027186.1 mouse_genomes_project 3 147058904 147092448 - MGP_WSBEiJ_P0063037 Sh3glb1 protein_coding protein_coding MGP_WSBEiJ_T0063038.1 MGP_WSBEiJ_G0027186.1 mouse_genomes_project 3 147060834 147092460 - MGP_WSBEiJ_P0063038 Sh3glb1 protein_coding protein_coding MGP_WSBEiJ_T0063039.1 MGP_WSBEiJ_G0027186.1 mouse_genomes_project 3 147063343 147092330 - MGP_WSBEiJ_P0063039 Sh3glb1 protein_coding protein_coding MGP_WSBEiJ_T0063040.1 MGP_WSBEiJ_G0027186.1 mouse_genomes_project 3 147064009 147079059 - MGP_WSBEiJ_P0063040 Sh3glb1 protein_coding protein_coding MGP_WSBEiJ_T0060454.1 MGP_WSBEiJ_G0026621.1 mouse_genomes_project 3 87373958 87379817 - Hapln2 protein_coding retained_intron MGP_WSBEiJ_T0060455.1 MGP_WSBEiJ_G0026621.1 mouse_genomes_project 3 87374269 87379712 - MGP_WSBEiJ_P0060455 Hapln2 protein_coding protein_coding MGP_WSBEiJ_T0060456.1 MGP_WSBEiJ_G0026621.1 mouse_genomes_project 3 87374846 87375914 - Hapln2 protein_coding retained_intron MGP_WSBEiJ_T0060457.1 MGP_WSBEiJ_G0026621.1 mouse_genomes_project 3 87375774 87379726 - MGP_WSBEiJ_P0060457 Hapln2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062017.1 MGP_WSBEiJ_G0026989.1 mouse_genomes_project 3 108336172 108346702 + MGP_WSBEiJ_P0062017 Alx3 protein_coding protein_coding MGP_WSBEiJ_T0013729.1 MGP_WSBEiJ_G0011859.1 mouse_genomes_project 3 66943900 66944481 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061265.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95109280 95146178 - MGP_WSBEiJ_P0061265 Gabpb2 protein_coding protein_coding MGP_WSBEiJ_T0061266.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95109280 95145971 - MGP_WSBEiJ_P0061266 Gabpb2 protein_coding protein_coding MGP_WSBEiJ_T0061267.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95109287 95137438 - MGP_WSBEiJ_P0061267 Gabpb2 protein_coding protein_coding MGP_WSBEiJ_T0061268.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95115100 95119399 - Gabpb2 protein_coding retained_intron MGP_WSBEiJ_T0061269.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95115236 95145971 - Gabpb2 protein_coding retained_intron MGP_WSBEiJ_T0061270.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95126125 95146178 - Gabpb2 protein_coding retained_intron MGP_WSBEiJ_T0061271.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95128257 95146178 - Gabpb2 protein_coding retained_intron MGP_WSBEiJ_T0061272.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95131685 95146016 - MGP_WSBEiJ_P0061272 Gabpb2 protein_coding protein_coding MGP_WSBEiJ_T0061273.1 MGP_WSBEiJ_G0026810.1 mouse_genomes_project 3 95143498 95145956 - Gabpb2 protein_coding processed_transcript MGP_WSBEiJ_T0061024.1 MGP_WSBEiJ_G0026726.1 mouse_genomes_project 3 91727965 91741242 + MGP_WSBEiJ_P0061024 Pglyrp3 protein_coding protein_coding MGP_WSBEiJ_T0098197.1 MGP_WSBEiJ_G0036860.1 mouse_genomes_project 3 96382170 96382335 + Rnu1b1 snRNA snRNA MGP_WSBEiJ_T0013705.1 MGP_WSBEiJ_G0011835.1 mouse_genomes_project 3 59664670 59664962 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013928.1 MGP_WSBEiJ_G0012058.1 mouse_genomes_project 3 136840797 136841251 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062747.1 MGP_WSBEiJ_G0027131.1 mouse_genomes_project 3 134937011 134956172 + MGP_WSBEiJ_P0062747 Ints12 protein_coding protein_coding MGP_WSBEiJ_T0062748.1 MGP_WSBEiJ_G0027131.1 mouse_genomes_project 3 134937109 134947221 + Ints12 protein_coding retained_intron MGP_WSBEiJ_T0062749.1 MGP_WSBEiJ_G0027131.1 mouse_genomes_project 3 134945516 134952239 + Ints12 protein_coding processed_transcript MGP_WSBEiJ_T0007621.1 MGP_WSBEiJ_G0006239.1 mouse_genomes_project 3 145904236 145905699 - Gm43616 lincRNA lincRNA MGP_WSBEiJ_T0007521.1 MGP_WSBEiJ_G0006157.1 mouse_genomes_project 3 101065376 101075661 + Gm43464 lincRNA lincRNA MGP_WSBEiJ_T0013853.1 MGP_WSBEiJ_G0011983.1 mouse_genomes_project 3 108736125 108736362 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061152.1 MGP_WSBEiJ_G0026793.1 mouse_genomes_project 3 94628796 94664610 - MGP_WSBEiJ_P0061152 Cgn protein_coding protein_coding MGP_WSBEiJ_T0061153.1 MGP_WSBEiJ_G0026793.1 mouse_genomes_project 3 94628796 94664639 - MGP_WSBEiJ_P0061153 Cgn protein_coding protein_coding MGP_WSBEiJ_T0061154.1 MGP_WSBEiJ_G0026793.1 mouse_genomes_project 3 94649230 94664614 - MGP_WSBEiJ_P0061154 Cgn protein_coding protein_coding MGP_WSBEiJ_T0061155.1 MGP_WSBEiJ_G0026793.1 mouse_genomes_project 3 94649230 94664598 - MGP_WSBEiJ_P0061155 Cgn protein_coding protein_coding MGP_WSBEiJ_T0007497.1 MGP_WSBEiJ_G0006135.1 mouse_genomes_project 3 89547391 89549959 + Gm19710 lincRNA lincRNA MGP_WSBEiJ_T0007498.1 MGP_WSBEiJ_G0006135.1 mouse_genomes_project 3 89549748 89570063 + Gm19710 lincRNA lincRNA MGP_WSBEiJ_T0097370.1 MGP_WSBEiJ_G0036044.1 mouse_genomes_project 3 105229047 105231907 + Gm43581 sense_intronic sense_intronic MGP_WSBEiJ_T0013827.1 MGP_WSBEiJ_G0011957.1 mouse_genomes_project 3 100779835 100780856 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007635.1 MGP_WSBEiJ_G0006251.1 mouse_genomes_project 3 148140396 148142565 + Gm17501 lincRNA lincRNA MGP_WSBEiJ_T0007636.1 MGP_WSBEiJ_G0006251.1 mouse_genomes_project 3 148142185 148171307 + Gm17501 lincRNA lincRNA MGP_WSBEiJ_T0100769.1 MGP_WSBEiJ_G0039227.1 mouse_genomes_project 3 78081725 78082248 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098220.1 MGP_WSBEiJ_G0036883.1 mouse_genomes_project 3 139935523 139935622 - Gm25920 snRNA snRNA MGP_WSBEiJ_T0007580.1 MGP_WSBEiJ_G0006203.1 mouse_genomes_project 3 132539196 132540182 + Gm42997 lincRNA lincRNA MGP_WSBEiJ_T0007581.1 MGP_WSBEiJ_G0006203.1 mouse_genomes_project 3 132539337 132586027 + Gm42997 lincRNA lincRNA MGP_WSBEiJ_T0060191.1 MGP_WSBEiJ_G0026559.1 mouse_genomes_project 3 78866239 78896157 - MGP_WSBEiJ_P0060191 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060192.1 MGP_WSBEiJ_G0026559.1 mouse_genomes_project 3 78885131 78907862 - MGP_WSBEiJ_P0060192 protein_coding protein_coding MGP_WSBEiJ_T0060193.1 MGP_WSBEiJ_G0026559.1 mouse_genomes_project 3 78892205 78907857 - MGP_WSBEiJ_P0060193 protein_coding protein_coding MGP_WSBEiJ_T0060194.1 MGP_WSBEiJ_G0026559.1 mouse_genomes_project 3 78892334 78896059 - protein_coding processed_transcript MGP_WSBEiJ_T0013687.1 MGP_WSBEiJ_G0011817.1 mouse_genomes_project 3 55923246 55923723 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099489.1 MGP_WSBEiJ_G0038152.1 mouse_genomes_project 3 156829484 156829564 - Snord45c snoRNA snoRNA MGP_WSBEiJ_T0004133.1 MGP_WSBEiJ_G0003643.1 mouse_genomes_project 3 28711962 28743568 + Gm15496 antisense antisense MGP_WSBEiJ_T0004134.1 MGP_WSBEiJ_G0003643.1 mouse_genomes_project 3 28736721 28741685 + Gm15496 antisense antisense MGP_WSBEiJ_T0001349.1 MGP_WSBEiJ_G0001278.1 mouse_genomes_project 3 155830291 155831276 + TEC TEC MGP_WSBEiJ_T0099434.1 MGP_WSBEiJ_G0038097.1 mouse_genomes_project 3 54655657 54655788 - Gm25727 snoRNA snoRNA MGP_WSBEiJ_T0097365.1 MGP_WSBEiJ_G0036039.1 mouse_genomes_project 3 104746336 104748766 - Gm43260 sense_intronic sense_intronic MGP_WSBEiJ_T0013588.1 MGP_WSBEiJ_G0011718.1 mouse_genomes_project 3 19453994 19454744 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001134.1 MGP_WSBEiJ_G0001066.1 mouse_genomes_project 3 39838615 39843051 + TEC TEC MGP_WSBEiJ_T0059669.1 MGP_WSBEiJ_G0026439.1 mouse_genomes_project 3 49416443 49482733 + Naa15 protein_coding processed_transcript MGP_WSBEiJ_T0059670.1 MGP_WSBEiJ_G0026439.1 mouse_genomes_project 3 49416470 49489127 + MGP_WSBEiJ_P0059670 Naa15 protein_coding protein_coding MGP_WSBEiJ_T0059671.1 MGP_WSBEiJ_G0026439.1 mouse_genomes_project 3 49416761 49453126 + MGP_WSBEiJ_P0059671 Naa15 protein_coding protein_coding MGP_WSBEiJ_T0059672.1 MGP_WSBEiJ_G0026439.1 mouse_genomes_project 3 49451388 49454154 + Naa15 protein_coding retained_intron MGP_WSBEiJ_T0059673.1 MGP_WSBEiJ_G0026439.1 mouse_genomes_project 3 49452377 49458814 + MGP_WSBEiJ_P0059673 Naa15 protein_coding protein_coding MGP_WSBEiJ_T0059674.1 MGP_WSBEiJ_G0026439.1 mouse_genomes_project 3 49470914 49474485 + Naa15 protein_coding retained_intron MGP_WSBEiJ_T0059675.1 MGP_WSBEiJ_G0026439.1 mouse_genomes_project 3 49471902 49474221 + Naa15 protein_coding retained_intron MGP_WSBEiJ_T0059676.1 MGP_WSBEiJ_G0026439.1 mouse_genomes_project 3 49480308 49483381 + Naa15 protein_coding retained_intron MGP_WSBEiJ_T0061852.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 104972107 105041659 - MGP_WSBEiJ_P0061852 Lrig2 protein_coding protein_coding MGP_WSBEiJ_T0061853.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 105034128 105098347 - MGP_WSBEiJ_P0061853 Lrig2 protein_coding protein_coding MGP_WSBEiJ_T0061854.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 105034129 105098335 - MGP_WSBEiJ_P0061854 Lrig2 protein_coding protein_coding MGP_WSBEiJ_T0061855.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 105036717 105062640 - Lrig2 protein_coding retained_intron MGP_WSBEiJ_T0061856.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 105037275 105098363 - MGP_WSBEiJ_P0061856 Lrig2 protein_coding protein_coding MGP_WSBEiJ_T0061857.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 105037493 105098425 - Lrig2 protein_coding retained_intron MGP_WSBEiJ_T0061858.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 105039354 105042971 - Lrig2 protein_coding retained_intron MGP_WSBEiJ_T0061859.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 105064041 105098168 - Lrig2 protein_coding retained_intron MGP_WSBEiJ_T0061860.1 MGP_WSBEiJ_G0026944.1 mouse_genomes_project 3 105074999 105076037 - Lrig2 protein_coding retained_intron MGP_WSBEiJ_T0013520.1 MGP_WSBEiJ_G0011650.1 mouse_genomes_project 3 1119066 1119496 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061957.1 MGP_WSBEiJ_G0026972.1 mouse_genomes_project 3 107221585 107267534 - MGP_WSBEiJ_P0061957 Cept1 protein_coding protein_coding MGP_WSBEiJ_T0061958.1 MGP_WSBEiJ_G0026972.1 mouse_genomes_project 3 107222308 107267314 - MGP_WSBEiJ_P0061958 Cept1 protein_coding protein_coding MGP_WSBEiJ_T0061959.1 MGP_WSBEiJ_G0026972.1 mouse_genomes_project 3 107222308 107267463 - MGP_WSBEiJ_P0061959 Cept1 protein_coding protein_coding MGP_WSBEiJ_T0061960.1 MGP_WSBEiJ_G0026972.1 mouse_genomes_project 3 107224579 107267431 - MGP_WSBEiJ_P0061960 Cept1 protein_coding protein_coding MGP_WSBEiJ_T0061961.1 MGP_WSBEiJ_G0026972.1 mouse_genomes_project 3 107240397 107267475 - MGP_WSBEiJ_P0061961 Cept1 protein_coding protein_coding MGP_WSBEiJ_T0061962.1 MGP_WSBEiJ_G0026972.1 mouse_genomes_project 3 107251097 107267450 - MGP_WSBEiJ_P0061962 Cept1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061963.1 MGP_WSBEiJ_G0026972.1 mouse_genomes_project 3 107259174 107267324 - MGP_WSBEiJ_P0061963 Cept1 protein_coding protein_coding MGP_WSBEiJ_T0013791.1 MGP_WSBEiJ_G0011921.1 mouse_genomes_project 3 92072939 92073240 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001209.1 MGP_WSBEiJ_G0001139.1 mouse_genomes_project 3 71954159 71956285 + TEC TEC MGP_WSBEiJ_T0017419.1 MGP_WSBEiJ_G0014947.1 mouse_genomes_project 3 129816620 129929087 - D030025E07Rik processed_transcript lincRNA MGP_WSBEiJ_T0017420.1 MGP_WSBEiJ_G0014947.1 mouse_genomes_project 3 129823811 129832965 - D030025E07Rik processed_transcript lincRNA MGP_WSBEiJ_T0017421.1 MGP_WSBEiJ_G0014947.1 mouse_genomes_project 3 129824188 129929090 - D030025E07Rik processed_transcript retained_intron MGP_WSBEiJ_T0017422.1 MGP_WSBEiJ_G0014947.1 mouse_genomes_project 3 129842340 129929037 - D030025E07Rik processed_transcript retained_intron MGP_WSBEiJ_T0017423.1 MGP_WSBEiJ_G0014947.1 mouse_genomes_project 3 129890086 129929076 - D030025E07Rik processed_transcript lincRNA MGP_WSBEiJ_T0013755.1 MGP_WSBEiJ_G0011885.1 mouse_genomes_project 3 77029762 77030203 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099435.1 MGP_WSBEiJ_G0038098.1 mouse_genomes_project 3 55258616 55258746 + Gm22269 snoRNA snoRNA MGP_WSBEiJ_T0013682.1 MGP_WSBEiJ_G0011812.1 mouse_genomes_project 3 55046638 55047108 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062170.1 MGP_WSBEiJ_G0027024.1 mouse_genomes_project 3 109603369 109654104 - MGP_WSBEiJ_P0062170 Stxbp3 protein_coding protein_coding MGP_WSBEiJ_T0062171.1 MGP_WSBEiJ_G0027024.1 mouse_genomes_project 3 109604620 109613673 - Stxbp3 protein_coding retained_intron MGP_WSBEiJ_T0062172.1 MGP_WSBEiJ_G0027024.1 mouse_genomes_project 3 109605064 109608923 - Stxbp3 protein_coding retained_intron MGP_WSBEiJ_T0062173.1 MGP_WSBEiJ_G0027024.1 mouse_genomes_project 3 109611250 109616836 - Stxbp3 protein_coding retained_intron MGP_WSBEiJ_T0062174.1 MGP_WSBEiJ_G0027024.1 mouse_genomes_project 3 109621064 109654044 - MGP_WSBEiJ_P0062174 Stxbp3 protein_coding protein_coding MGP_WSBEiJ_T0062175.1 MGP_WSBEiJ_G0027024.1 mouse_genomes_project 3 109632940 109654108 - Stxbp3 protein_coding processed_transcript MGP_WSBEiJ_T0062176.1 MGP_WSBEiJ_G0027024.1 mouse_genomes_project 3 109635670 109654119 - MGP_WSBEiJ_P0062176 Stxbp3 protein_coding protein_coding MGP_WSBEiJ_T0062177.1 MGP_WSBEiJ_G0027024.1 mouse_genomes_project 3 109637877 109654103 - MGP_WSBEiJ_P0062177 Stxbp3 protein_coding protein_coding MGP_WSBEiJ_T0060938.1 MGP_WSBEiJ_G0026703.1 mouse_genomes_project 3 89842653 89858730 + MGP_WSBEiJ_P0060938 Dennd4b protein_coding protein_coding MGP_WSBEiJ_T0060939.1 MGP_WSBEiJ_G0026703.1 mouse_genomes_project 3 89843982 89858730 + MGP_WSBEiJ_P0060939 Dennd4b protein_coding protein_coding MGP_WSBEiJ_T0060940.1 MGP_WSBEiJ_G0026703.1 mouse_genomes_project 3 89844929 89853702 + MGP_WSBEiJ_P0060940 Dennd4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060941.1 MGP_WSBEiJ_G0026703.1 mouse_genomes_project 3 89846484 89849166 + MGP_WSBEiJ_P0060941 Dennd4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060942.1 MGP_WSBEiJ_G0026703.1 mouse_genomes_project 3 89853519 89855539 + MGP_WSBEiJ_P0060942 Dennd4b protein_coding protein_coding MGP_WSBEiJ_T0060943.1 MGP_WSBEiJ_G0026703.1 mouse_genomes_project 3 89855463 89856404 + Dennd4b protein_coding retained_intron MGP_WSBEiJ_T0060944.1 MGP_WSBEiJ_G0026703.1 mouse_genomes_project 3 89856068 89856731 + Dennd4b protein_coding retained_intron MGP_WSBEiJ_T0059707.1 MGP_WSBEiJ_G0026447.1 mouse_genomes_project 3 51516467 51531986 - MGP_WSBEiJ_P0059707 Nhlrc3 protein_coding protein_coding MGP_WSBEiJ_T0059708.1 MGP_WSBEiJ_G0026447.1 mouse_genomes_project 3 51516472 51531977 - MGP_WSBEiJ_P0059708 Nhlrc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059709.1 MGP_WSBEiJ_G0026447.1 mouse_genomes_project 3 51527039 51530659 - Nhlrc3 protein_coding retained_intron MGP_WSBEiJ_T0059710.1 MGP_WSBEiJ_G0026447.1 mouse_genomes_project 3 51527544 51531905 - Nhlrc3 protein_coding retained_intron MGP_WSBEiJ_T0059711.1 MGP_WSBEiJ_G0026447.1 mouse_genomes_project 3 51530738 51531951 - Nhlrc3 protein_coding retained_intron MGP_WSBEiJ_T0063359.1 MGP_WSBEiJ_G0027241.1 mouse_genomes_project 3 158035018 158043501 - MGP_WSBEiJ_P0063359 Fpgt protein_coding protein_coding MGP_WSBEiJ_T0063360.1 MGP_WSBEiJ_G0027241.1 mouse_genomes_project 3 158037820 158043295 - Fpgt protein_coding processed_transcript MGP_WSBEiJ_T0063361.1 MGP_WSBEiJ_G0027241.1 mouse_genomes_project 3 158039129 158040621 - Fpgt protein_coding retained_intron MGP_WSBEiJ_T0063362.1 MGP_WSBEiJ_G0027241.1 mouse_genomes_project 3 158041044 158043466 - Fpgt protein_coding retained_intron MGP_WSBEiJ_T0063363.1 MGP_WSBEiJ_G0027241.1 mouse_genomes_project 3 158041426 158042653 - Fpgt protein_coding processed_transcript MGP_WSBEiJ_T0063364.1 MGP_WSBEiJ_G0027241.1 mouse_genomes_project 3 158041511 158043325 - Fpgt protein_coding processed_transcript MGP_WSBEiJ_T0060155.1 MGP_WSBEiJ_G0026551.1 mouse_genomes_project 3 74994112 75675196 + MGP_WSBEiJ_P0060155 Fstl5 protein_coding protein_coding MGP_WSBEiJ_T0060156.1 MGP_WSBEiJ_G0026551.1 mouse_genomes_project 3 74994401 75500826 + Fstl5 protein_coding processed_transcript MGP_WSBEiJ_T0060157.1 MGP_WSBEiJ_G0026551.1 mouse_genomes_project 3 74995425 75673812 + MGP_WSBEiJ_P0060157 Fstl5 protein_coding protein_coding MGP_WSBEiJ_T0060158.1 MGP_WSBEiJ_G0026551.1 mouse_genomes_project 3 75541949 75545170 + Fstl5 protein_coding retained_intron MGP_WSBEiJ_T0060159.1 MGP_WSBEiJ_G0026551.1 mouse_genomes_project 3 75550636 75672726 + MGP_WSBEiJ_P0060159 Fstl5 protein_coding protein_coding MGP_WSBEiJ_T0013538.1 MGP_WSBEiJ_G0011668.1 mouse_genomes_project 3 6504182 6504565 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001136.1 MGP_WSBEiJ_G0001068.1 mouse_genomes_project 3 42374625 42380094 + TEC TEC MGP_WSBEiJ_T0001348.1 MGP_WSBEiJ_G0001277.1 mouse_genomes_project 3 155246030 155249109 - TEC TEC MGP_WSBEiJ_T0013962.1 MGP_WSBEiJ_G0012092.1 mouse_genomes_project 3 146214647 146215472 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061679.1 MGP_WSBEiJ_G0026912.1 mouse_genomes_project 3 101803096 101805554 + Igsf3 protein_coding retained_intron MGP_WSBEiJ_T0061680.1 MGP_WSBEiJ_G0026912.1 mouse_genomes_project 3 101803096 101893220 + MGP_WSBEiJ_P0061680 Igsf3 protein_coding protein_coding MGP_WSBEiJ_T0061681.1 MGP_WSBEiJ_G0026912.1 mouse_genomes_project 3 101804351 101890290 + MGP_WSBEiJ_P0061681 Igsf3 protein_coding protein_coding MGP_WSBEiJ_T0060242.1 MGP_WSBEiJ_G0026570.1 mouse_genomes_project 3 81657474 81667142 - MGP_WSBEiJ_P0060242 Npy2r protein_coding protein_coding MGP_WSBEiJ_T0060243.1 MGP_WSBEiJ_G0026570.1 mouse_genomes_project 3 81657477 81667110 - MGP_WSBEiJ_P0060243 Npy2r protein_coding protein_coding MGP_WSBEiJ_T0060244.1 MGP_WSBEiJ_G0026570.1 mouse_genomes_project 3 81659040 81667018 - MGP_WSBEiJ_P0060244 Npy2r protein_coding protein_coding MGP_WSBEiJ_T0060245.1 MGP_WSBEiJ_G0026570.1 mouse_genomes_project 3 81659040 81667018 - MGP_WSBEiJ_P0060245 Npy2r protein_coding protein_coding MGP_WSBEiJ_T0061051.1 MGP_WSBEiJ_G0026749.1 mouse_genomes_project 3 92356454 92359227 - MGP_WSBEiJ_P0061051 2210017I01Rik protein_coding protein_coding MGP_WSBEiJ_T0098190.1 MGP_WSBEiJ_G0036853.1 mouse_genomes_project 3 92728070 92728178 - Gm24481 snRNA snRNA MGP_WSBEiJ_T0098186.1 MGP_WSBEiJ_G0036849.1 mouse_genomes_project 3 89508562 89508727 - Gm24046 snRNA snRNA MGP_WSBEiJ_T0097042.1 MGP_WSBEiJ_G0035723.1 mouse_genomes_project 3 37336002 37336121 - n-R5s195 rRNA rRNA MGP_WSBEiJ_T0010358.1 MGP_WSBEiJ_G0008515.1 mouse_genomes_project 3 89559786 89559844 - Mir7669 miRNA miRNA MGP_WSBEiJ_T0059531.1 MGP_WSBEiJ_G0026417.1 mouse_genomes_project 3 36139004 36175493 - MGP_WSBEiJ_P0059531 protein_coding protein_coding MGP_WSBEiJ_T0059532.1 MGP_WSBEiJ_G0026417.1 mouse_genomes_project 3 36139396 36173742 - MGP_WSBEiJ_P0059532 protein_coding protein_coding MGP_WSBEiJ_T0059533.1 MGP_WSBEiJ_G0026417.1 mouse_genomes_project 3 36141817 36145295 - MGP_WSBEiJ_P0059533 protein_coding protein_coding MGP_WSBEiJ_T0059534.1 MGP_WSBEiJ_G0026417.1 mouse_genomes_project 3 36173901 36175464 - protein_coding processed_transcript MGP_WSBEiJ_T0100085.1 MGP_WSBEiJ_G0038694.1 mouse_genomes_project 3 130548052 130548738 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0061762.1 MGP_WSBEiJ_G0026927.1 mouse_genomes_project 3 103567824 103594549 + MGP_WSBEiJ_P0061762 Ampd1 protein_coding protein_coding MGP_WSBEiJ_T0061763.1 MGP_WSBEiJ_G0026927.1 mouse_genomes_project 3 103567832 103594543 + MGP_WSBEiJ_P0061763 Ampd1 protein_coding protein_coding MGP_WSBEiJ_T0061764.1 MGP_WSBEiJ_G0026927.1 mouse_genomes_project 3 103567863 103582046 + MGP_WSBEiJ_P0061764 Ampd1 protein_coding protein_coding MGP_WSBEiJ_T0061765.1 MGP_WSBEiJ_G0026927.1 mouse_genomes_project 3 103588424 103589452 + Ampd1 protein_coding retained_intron MGP_WSBEiJ_T0061766.1 MGP_WSBEiJ_G0026927.1 mouse_genomes_project 3 103589095 103594535 + MGP_WSBEiJ_P0061766 Ampd1 protein_coding protein_coding MGP_WSBEiJ_T0062944.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141023034 141179680 - MGP_WSBEiJ_P0062944 Rap1gds1 protein_coding protein_coding MGP_WSBEiJ_T0062945.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141023038 141179616 - MGP_WSBEiJ_P0062945 Rap1gds1 protein_coding protein_coding MGP_WSBEiJ_T0062946.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141023042 141179549 - MGP_WSBEiJ_P0062946 Rap1gds1 protein_coding protein_coding MGP_WSBEiJ_T0062947.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141037514 141179619 - MGP_WSBEiJ_P0062947 Rap1gds1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062948.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141037517 141179627 - MGP_WSBEiJ_P0062948 Rap1gds1 protein_coding protein_coding MGP_WSBEiJ_T0062949.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141054101 141081311 - Rap1gds1 protein_coding retained_intron MGP_WSBEiJ_T0062950.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141111833 141179672 - Rap1gds1 protein_coding retained_intron MGP_WSBEiJ_T0062951.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141119909 141179277 - Rap1gds1 protein_coding processed_transcript MGP_WSBEiJ_T0062952.1 MGP_WSBEiJ_G0027169.1 mouse_genomes_project 3 141149933 141179619 - Rap1gds1 protein_coding retained_intron MGP_WSBEiJ_T0013622.1 MGP_WSBEiJ_G0011752.1 mouse_genomes_project 3 34996317 34996636 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013574.1 MGP_WSBEiJ_G0011704.1 mouse_genomes_project 3 15623727 15624927 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097356.1 MGP_WSBEiJ_G0036030.1 mouse_genomes_project 3 104402644 104404736 + Gm43065 sense_intronic sense_intronic MGP_WSBEiJ_T0100791.1 MGP_WSBEiJ_G0039249.1 mouse_genomes_project 3 98961464 98969319 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0061992.1 MGP_WSBEiJ_G0026979.1 mouse_genomes_project 3 107900008 107912517 + MGP_WSBEiJ_P0061992 Kcna10 protein_coding protein_coding MGP_WSBEiJ_T0061993.1 MGP_WSBEiJ_G0026979.1 mouse_genomes_project 3 107900096 107904281 + Kcna10 protein_coding processed_transcript MGP_WSBEiJ_T0060970.1 MGP_WSBEiJ_G0026708.1 mouse_genomes_project 3 90081348 90093024 + Ilf2 protein_coding retained_intron MGP_WSBEiJ_T0060971.1 MGP_WSBEiJ_G0026708.1 mouse_genomes_project 3 90081362 90084532 + Ilf2 protein_coding retained_intron MGP_WSBEiJ_T0060972.1 MGP_WSBEiJ_G0026708.1 mouse_genomes_project 3 90081369 90087513 + Ilf2 protein_coding retained_intron MGP_WSBEiJ_T0060973.1 MGP_WSBEiJ_G0026708.1 mouse_genomes_project 3 90081369 90093440 + MGP_WSBEiJ_P0060973 Ilf2 protein_coding protein_coding MGP_WSBEiJ_T0060974.1 MGP_WSBEiJ_G0026708.1 mouse_genomes_project 3 90081379 90090533 + Ilf2 protein_coding retained_intron MGP_WSBEiJ_T0060975.1 MGP_WSBEiJ_G0026708.1 mouse_genomes_project 3 90085900 90091454 + Ilf2 protein_coding retained_intron MGP_WSBEiJ_T0061003.1 MGP_WSBEiJ_G0026716.1 mouse_genomes_project 3 90204155 90205413 + MGP_WSBEiJ_P0061003 S100a2 protein_coding protein_coding MGP_WSBEiJ_T0098230.1 MGP_WSBEiJ_G0036893.1 mouse_genomes_project 3 160433396 160433505 - Gm23379 snRNA snRNA MGP_WSBEiJ_T0013601.1 MGP_WSBEiJ_G0011731.1 mouse_genomes_project 3 27955805 27956278 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001344.1 MGP_WSBEiJ_G0001273.1 mouse_genomes_project 3 155106204 155109002 - TEC TEC MGP_WSBEiJ_T0060527.1 MGP_WSBEiJ_G0026637.1 mouse_genomes_project 3 87754533 87755648 - MGP_WSBEiJ_P0060527 protein_coding protein_coding MGP_WSBEiJ_T0013922.1 MGP_WSBEiJ_G0012052.1 mouse_genomes_project 3 134681833 134683945 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059130.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24287583 24353464 - MGP_WSBEiJ_P0059130 Ect2 protein_coding protein_coding MGP_WSBEiJ_T0059131.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24287583 24353447 - MGP_WSBEiJ_P0059131 Ect2 protein_coding protein_coding MGP_WSBEiJ_T0059132.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24287584 24353440 - MGP_WSBEiJ_P0059132 Ect2 protein_coding protein_coding MGP_WSBEiJ_T0059133.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24287587 24353436 - MGP_WSBEiJ_P0059133 Ect2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059134.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24288667 24306747 - MGP_WSBEiJ_P0059134 Ect2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059135.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24306791 24311442 - Ect2 protein_coding retained_intron MGP_WSBEiJ_T0059136.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24310627 24353398 - Ect2 protein_coding retained_intron MGP_WSBEiJ_T0059137.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24320198 24328456 - Ect2 protein_coding retained_intron MGP_WSBEiJ_T0059138.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24344534 24346786 - Ect2 protein_coding retained_intron MGP_WSBEiJ_T0059139.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24344604 24353440 - MGP_WSBEiJ_P0059139 Ect2 protein_coding protein_coding MGP_WSBEiJ_T0059140.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24345552 24353414 - MGP_WSBEiJ_P0059140 Ect2 protein_coding protein_coding MGP_WSBEiJ_T0059141.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24345568 24353396 - MGP_WSBEiJ_P0059141 Ect2 protein_coding protein_coding MGP_WSBEiJ_T0059142.1 MGP_WSBEiJ_G0026349.1 mouse_genomes_project 3 24345612 24353368 - MGP_WSBEiJ_P0059142 Ect2 protein_coding protein_coding MGP_WSBEiJ_T0007640.1 MGP_WSBEiJ_G0006255.1 mouse_genomes_project 3 149973018 149984077 + Gm36831 lincRNA lincRNA MGP_WSBEiJ_T0001272.1 MGP_WSBEiJ_G0001202.1 mouse_genomes_project 3 123164757 123167469 - TEC TEC MGP_WSBEiJ_T0007336.1 MGP_WSBEiJ_G0006019.1 mouse_genomes_project 3 5885110 5895236 + 4930539M17Rik lincRNA lincRNA MGP_WSBEiJ_T0060187.1 MGP_WSBEiJ_G0026558.1 mouse_genomes_project 3 78687195 78793061 - MGP_WSBEiJ_P0060187 Rxfp1 protein_coding protein_coding MGP_WSBEiJ_T0060188.1 MGP_WSBEiJ_G0026558.1 mouse_genomes_project 3 78689690 78793147 - MGP_WSBEiJ_P0060188 Rxfp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060189.1 MGP_WSBEiJ_G0026558.1 mouse_genomes_project 3 78697228 78699111 - Rxfp1 protein_coding retained_intron MGP_WSBEiJ_T0060190.1 MGP_WSBEiJ_G0026558.1 mouse_genomes_project 3 78700892 78714756 - Rxfp1 protein_coding processed_transcript MGP_WSBEiJ_T0004311.1 MGP_WSBEiJ_G0003763.1 mouse_genomes_project 3 140259661 140290800 - 0610031O16Rik antisense antisense MGP_WSBEiJ_T0004312.1 MGP_WSBEiJ_G0003763.1 mouse_genomes_project 3 140268296 140290800 - 0610031O16Rik antisense antisense MGP_WSBEiJ_T0004313.1 MGP_WSBEiJ_G0003763.1 mouse_genomes_project 3 140277682 140290816 - 0610031O16Rik antisense antisense MGP_WSBEiJ_T0004314.1 MGP_WSBEiJ_G0003763.1 mouse_genomes_project 3 140280190 140291542 - 0610031O16Rik antisense antisense MGP_WSBEiJ_T0011341.1 MGP_WSBEiJ_G0009498.1 mouse_genomes_project 3 72003908 72004207 - Gm22538 misc_RNA misc_RNA MGP_WSBEiJ_T0059022.1 MGP_WSBEiJ_G0026323.1 mouse_genomes_project 3 12521119 12560138 - protein_coding retained_intron MGP_WSBEiJ_T0061248.1 MGP_WSBEiJ_G0026806.1 mouse_genomes_project 3 95055067 95060969 + MGP_WSBEiJ_P0061248 protein_coding protein_coding MGP_WSBEiJ_T0001159.1 MGP_WSBEiJ_G0001091.1 mouse_genomes_project 3 49688558 49689659 + TEC TEC MGP_WSBEiJ_T0010328.1 MGP_WSBEiJ_G0008485.1 mouse_genomes_project 3 17321938 17322008 - Mir7007 miRNA miRNA MGP_WSBEiJ_T0007632.1 MGP_WSBEiJ_G0006248.1 mouse_genomes_project 3 146451341 146486625 - Gm42709 lincRNA lincRNA MGP_WSBEiJ_T0099440.1 MGP_WSBEiJ_G0038103.1 mouse_genomes_project 3 68907034 68907162 - Gm23477 snoRNA snoRNA MGP_WSBEiJ_T0061049.1 MGP_WSBEiJ_G0026748.1 mouse_genomes_project 3 92332586 92334922 - MGP_WSBEiJ_P0061049 Smcp protein_coding protein_coding MGP_WSBEiJ_T0061050.1 MGP_WSBEiJ_G0026748.1 mouse_genomes_project 3 92332586 92337697 - MGP_WSBEiJ_P0061050 Smcp protein_coding protein_coding MGP_WSBEiJ_T0060364.1 MGP_WSBEiJ_G0026603.1 mouse_genomes_project 3 86678817 86692995 + MGP_WSBEiJ_P0060364 Cd5l protein_coding protein_coding MGP_WSBEiJ_T0001080.1 MGP_WSBEiJ_G0001012.1 mouse_genomes_project 3 7718846 7720531 - TEC TEC MGP_WSBEiJ_T0013824.1 MGP_WSBEiJ_G0011954.1 mouse_genomes_project 3 99893919 99894574 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004253.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108636152 108643530 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004254.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108637350 108643083 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004255.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108638788 108643115 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004256.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108640181 108643009 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004257.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108640212 108643090 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004258.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108640441 108643126 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004259.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108640540 108643091 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004260.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108640584 108643100 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004261.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108640736 108643106 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004262.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108640790 108643117 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004263.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108640820 108643080 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0004264.1 MGP_WSBEiJ_G0003727.1 mouse_genomes_project 3 108641446 108643129 - 4933431E20Rik antisense antisense MGP_WSBEiJ_T0007419.1 MGP_WSBEiJ_G0006080.1 mouse_genomes_project 3 49032102 49048974 - Gm29230 lincRNA lincRNA MGP_WSBEiJ_T0099482.1 MGP_WSBEiJ_G0038145.1 mouse_genomes_project 3 146962535 146962663 - Gm24406 snoRNA snoRNA MGP_WSBEiJ_T0061989.1 MGP_WSBEiJ_G0026978.1 mouse_genomes_project 3 107818877 107825465 + MGP_WSBEiJ_P0061989 Kcna2 protein_coding protein_coding MGP_WSBEiJ_T0061990.1 MGP_WSBEiJ_G0026978.1 mouse_genomes_project 3 107819298 107832796 + MGP_WSBEiJ_P0061990 Kcna2 protein_coding protein_coding MGP_WSBEiJ_T0061991.1 MGP_WSBEiJ_G0026978.1 mouse_genomes_project 3 107820413 107823704 + MGP_WSBEiJ_P0061991 Kcna2 protein_coding protein_coding MGP_WSBEiJ_T0013653.1 MGP_WSBEiJ_G0011783.1 mouse_genomes_project 3 45389497 45390207 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013883.1 MGP_WSBEiJ_G0012013.1 mouse_genomes_project 3 118014478 118014868 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100767.1 MGP_WSBEiJ_G0039225.1 mouse_genomes_project 3 78081719 78082245 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013643.1 MGP_WSBEiJ_G0011773.1 mouse_genomes_project 3 42220761 42221170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007566.1 MGP_WSBEiJ_G0006191.1 mouse_genomes_project 3 123103365 123112380 - Gm43608 lincRNA lincRNA MGP_WSBEiJ_T0007517.1 MGP_WSBEiJ_G0006153.1 mouse_genomes_project 3 99256767 99260375 - 5730437C11Rik lincRNA lincRNA MGP_WSBEiJ_T0013717.1 MGP_WSBEiJ_G0011847.1 mouse_genomes_project 3 64557808 64558058 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059541.1 MGP_WSBEiJ_G0026421.1 mouse_genomes_project 3 38363402 38376652 + MGP_WSBEiJ_P0059541 Hspa4l protein_coding protein_coding MGP_WSBEiJ_T0059542.1 MGP_WSBEiJ_G0026421.1 mouse_genomes_project 3 38364971 38401677 + MGP_WSBEiJ_P0059542 Hspa4l protein_coding protein_coding MGP_WSBEiJ_T0059543.1 MGP_WSBEiJ_G0026421.1 mouse_genomes_project 3 38365019 38418250 + MGP_WSBEiJ_P0059543 Hspa4l protein_coding protein_coding MGP_WSBEiJ_T0059544.1 MGP_WSBEiJ_G0026421.1 mouse_genomes_project 3 38365073 38380418 + MGP_WSBEiJ_P0059544 Hspa4l protein_coding protein_coding MGP_WSBEiJ_T0059545.1 MGP_WSBEiJ_G0026421.1 mouse_genomes_project 3 38365172 38378179 + Hspa4l protein_coding retained_intron MGP_WSBEiJ_T0059546.1 MGP_WSBEiJ_G0026421.1 mouse_genomes_project 3 38365457 38409830 + MGP_WSBEiJ_P0059546 Hspa4l protein_coding protein_coding MGP_WSBEiJ_T0059547.1 MGP_WSBEiJ_G0026421.1 mouse_genomes_project 3 38392732 38401919 + Hspa4l protein_coding retained_intron MGP_WSBEiJ_T0059548.1 MGP_WSBEiJ_G0026421.1 mouse_genomes_project 3 38404098 38406909 + Hspa4l protein_coding retained_intron MGP_WSBEiJ_T0063083.1 MGP_WSBEiJ_G0027197.1 mouse_genomes_project 3 148435306 148437670 + Bcl10 protein_coding retained_intron MGP_WSBEiJ_T0063084.1 MGP_WSBEiJ_G0027197.1 mouse_genomes_project 3 148436762 148448125 + MGP_WSBEiJ_P0063084 Bcl10 protein_coding protein_coding MGP_WSBEiJ_T0063085.1 MGP_WSBEiJ_G0027197.1 mouse_genomes_project 3 148436857 148440429 + Bcl10 protein_coding processed_transcript MGP_WSBEiJ_T0099480.1 MGP_WSBEiJ_G0038143.1 mouse_genomes_project 3 145091175 145091268 + Gm25965 snoRNA snoRNA MGP_WSBEiJ_T0011342.1 MGP_WSBEiJ_G0009499.1 mouse_genomes_project 3 77856916 77857259 + Gm24749 misc_RNA misc_RNA MGP_WSBEiJ_T0013870.1 MGP_WSBEiJ_G0012000.1 mouse_genomes_project 3 113583208 113583601 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097040.1 MGP_WSBEiJ_G0035721.1 mouse_genomes_project 3 22677386 22677521 + Gm24250 rRNA rRNA MGP_WSBEiJ_T0062003.1 MGP_WSBEiJ_G0026985.1 mouse_genomes_project 3 108051756 108062887 - MGP_WSBEiJ_P0062003 Rbm15 protein_coding protein_coding MGP_WSBEiJ_T0062004.1 MGP_WSBEiJ_G0026985.1 mouse_genomes_project 3 108054616 108062315 - Rbm15 protein_coding retained_intron MGP_WSBEiJ_T0061229.1 MGP_WSBEiJ_G0026803.1 mouse_genomes_project 3 95030986 95044286 + MGP_WSBEiJ_P0061229 Vps72 protein_coding protein_coding MGP_WSBEiJ_T0061230.1 MGP_WSBEiJ_G0026803.1 mouse_genomes_project 3 95031006 95039809 + Vps72 protein_coding processed_transcript MGP_WSBEiJ_T0061231.1 MGP_WSBEiJ_G0026803.1 mouse_genomes_project 3 95031037 95043956 + Vps72 protein_coding processed_transcript MGP_WSBEiJ_T0061232.1 MGP_WSBEiJ_G0026803.1 mouse_genomes_project 3 95036080 95040600 + Vps72 protein_coding processed_transcript MGP_WSBEiJ_T0061233.1 MGP_WSBEiJ_G0026803.1 mouse_genomes_project 3 95038231 95040719 + Vps72 protein_coding retained_intron MGP_WSBEiJ_T0007459.1 MGP_WSBEiJ_G0006111.1 mouse_genomes_project 3 74655447 74686745 + lincRNA lincRNA MGP_WSBEiJ_T0001245.1 MGP_WSBEiJ_G0001175.1 mouse_genomes_project 3 105255268 105259063 - TEC TEC MGP_WSBEiJ_T0099439.1 MGP_WSBEiJ_G0038102.1 mouse_genomes_project 3 68628046 68628177 - Gm23484 snoRNA snoRNA MGP_WSBEiJ_T0007352.1 MGP_WSBEiJ_G0006030.1 mouse_genomes_project 3 14839548 14849099 + Mir124-2hg lincRNA lincRNA MGP_WSBEiJ_T0007353.1 MGP_WSBEiJ_G0006030.1 mouse_genomes_project 3 14843505 14844991 + Mir124-2hg lincRNA lincRNA MGP_WSBEiJ_T0007354.1 MGP_WSBEiJ_G0006030.1 mouse_genomes_project 3 14843513 14849155 + Mir124-2hg lincRNA lincRNA MGP_WSBEiJ_T0007355.1 MGP_WSBEiJ_G0006030.1 mouse_genomes_project 3 14843530 14849068 + Mir124-2hg lincRNA lincRNA MGP_WSBEiJ_T0007356.1 MGP_WSBEiJ_G0006030.1 mouse_genomes_project 3 14844481 14860707 + Mir124-2hg lincRNA lincRNA MGP_WSBEiJ_T0007357.1 MGP_WSBEiJ_G0006030.1 mouse_genomes_project 3 14845329 14849155 + Mir124-2hg lincRNA lincRNA MGP_WSBEiJ_T0063106.1 MGP_WSBEiJ_G0027203.1 mouse_genomes_project 3 148754999 148825023 + MGP_WSBEiJ_P0063106 Lpar3 protein_coding protein_coding MGP_WSBEiJ_T0097044.1 MGP_WSBEiJ_G0035725.1 mouse_genomes_project 3 68343649 68343763 + Gm25621 rRNA rRNA MGP_WSBEiJ_T0010327.1 MGP_WSBEiJ_G0008484.1 mouse_genomes_project 3 14845247 14845356 + Mir124a-2 miRNA miRNA MGP_WSBEiJ_T0001312.1 MGP_WSBEiJ_G0001241.1 mouse_genomes_project 3 132369327 132373037 + TEC TEC MGP_WSBEiJ_T0013812.1 MGP_WSBEiJ_G0011942.1 mouse_genomes_project 3 95948537 95948897 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001079.1 MGP_WSBEiJ_G0001011.1 mouse_genomes_project 3 7585973 7587760 + TEC TEC MGP_WSBEiJ_T0007387.1 MGP_WSBEiJ_G0006057.1 mouse_genomes_project 3 33189231 33258178 - Gm6639 lincRNA lincRNA MGP_WSBEiJ_T0100083.1 MGP_WSBEiJ_G0038692.1 mouse_genomes_project 3 125793698 125794127 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013686.1 MGP_WSBEiJ_G0011816.1 mouse_genomes_project 3 55727225 55727775 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001268.1 MGP_WSBEiJ_G0001198.1 mouse_genomes_project 3 122804831 122808899 - TEC TEC MGP_WSBEiJ_T0001311.1 MGP_WSBEiJ_G0001240.1 mouse_genomes_project 3 132344390 132350552 + TEC TEC MGP_WSBEiJ_T0013751.1 MGP_WSBEiJ_G0011881.1 mouse_genomes_project 3 75867359 75868189 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013528.1 MGP_WSBEiJ_G0011658.1 mouse_genomes_project 3 4229102 4230132 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061138.1 MGP_WSBEiJ_G0026791.1 mouse_genomes_project 3 94309192 94394597 - MGP_WSBEiJ_P0061138 Snx27 protein_coding protein_coding MGP_WSBEiJ_T0061139.1 MGP_WSBEiJ_G0026791.1 mouse_genomes_project 3 94310960 94394430 - MGP_WSBEiJ_P0061139 Snx27 protein_coding protein_coding MGP_WSBEiJ_T0061140.1 MGP_WSBEiJ_G0026791.1 mouse_genomes_project 3 94312689 94336757 - Snx27 protein_coding processed_transcript MGP_WSBEiJ_T0061141.1 MGP_WSBEiJ_G0026791.1 mouse_genomes_project 3 94312775 94394560 - MGP_WSBEiJ_P0061141 Snx27 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061142.1 MGP_WSBEiJ_G0026791.1 mouse_genomes_project 3 94312785 94331566 - Snx27 protein_coding processed_transcript MGP_WSBEiJ_T0061143.1 MGP_WSBEiJ_G0026791.1 mouse_genomes_project 3 94313704 94369642 - MGP_WSBEiJ_P0061143 Snx27 protein_coding protein_coding MGP_WSBEiJ_T0061144.1 MGP_WSBEiJ_G0026791.1 mouse_genomes_project 3 94331584 94369405 - MGP_WSBEiJ_P0061144 Snx27 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061145.1 MGP_WSBEiJ_G0026791.1 mouse_genomes_project 3 94343678 94344327 - Snx27 protein_coding processed_transcript MGP_WSBEiJ_T0060803.1 MGP_WSBEiJ_G0026680.1 mouse_genomes_project 3 88888509 88901055 - MGP_WSBEiJ_P0060803 Flad1 protein_coding protein_coding MGP_WSBEiJ_T0060804.1 MGP_WSBEiJ_G0026680.1 mouse_genomes_project 3 88889474 88901048 - MGP_WSBEiJ_P0060804 Flad1 protein_coding protein_coding MGP_WSBEiJ_T0060805.1 MGP_WSBEiJ_G0026680.1 mouse_genomes_project 3 88890172 88901054 - MGP_WSBEiJ_P0060805 Flad1 protein_coding protein_coding MGP_WSBEiJ_T0060806.1 MGP_WSBEiJ_G0026680.1 mouse_genomes_project 3 88897914 88900966 - MGP_WSBEiJ_P0060806 Flad1 protein_coding protein_coding MGP_WSBEiJ_T0060807.1 MGP_WSBEiJ_G0026680.1 mouse_genomes_project 3 88898139 88901055 - MGP_WSBEiJ_P0060807 Flad1 protein_coding protein_coding MGP_WSBEiJ_T0013825.1 MGP_WSBEiJ_G0011955.1 mouse_genomes_project 3 100359970 100360285 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013564.1 MGP_WSBEiJ_G0011694.1 mouse_genomes_project 3 12881395 12882535 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060044.1 MGP_WSBEiJ_G0026523.1 mouse_genomes_project 3 66037594 66043525 - MGP_WSBEiJ_P0060044 Lxn protein_coding protein_coding MGP_WSBEiJ_T0060045.1 MGP_WSBEiJ_G0026523.1 mouse_genomes_project 3 66037597 66041231 - Lxn protein_coding retained_intron MGP_WSBEiJ_T0060046.1 MGP_WSBEiJ_G0026523.1 mouse_genomes_project 3 66040657 66043381 - Lxn protein_coding retained_intron MGP_WSBEiJ_T0061987.1 MGP_WSBEiJ_G0026976.1 mouse_genomes_project 3 107525318 107526345 - MGP_WSBEiJ_P0061987 Olfr266 protein_coding protein_coding MGP_WSBEiJ_T0062328.1 MGP_WSBEiJ_G0027056.1 mouse_genomes_project 3 118035650 118077465 + MGP_WSBEiJ_P0062328 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062329.1 MGP_WSBEiJ_G0027056.1 mouse_genomes_project 3 118037786 118094305 + MGP_WSBEiJ_P0062329 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062330.1 MGP_WSBEiJ_G0027056.1 mouse_genomes_project 3 118077385 118083137 + protein_coding retained_intron MGP_WSBEiJ_T0062331.1 MGP_WSBEiJ_G0027056.1 mouse_genomes_project 3 118078104 118090148 + protein_coding retained_intron MGP_WSBEiJ_T0062332.1 MGP_WSBEiJ_G0027056.1 mouse_genomes_project 3 118083125 118093583 + MGP_WSBEiJ_P0062332 protein_coding protein_coding MGP_WSBEiJ_T0001365.1 MGP_WSBEiJ_G0001294.1 mouse_genomes_project 3 161242799 161244529 + TEC TEC MGP_WSBEiJ_T0007391.1 MGP_WSBEiJ_G0006061.1 mouse_genomes_project 3 34851657 34857366 + Gm12532 lincRNA lincRNA MGP_WSBEiJ_T0061461.1 MGP_WSBEiJ_G0026845.1 mouse_genomes_project 3 96215050 96215494 + MGP_WSBEiJ_P0061461 Hist2h2ab protein_coding protein_coding MGP_WSBEiJ_T0060759.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88752829 88755107 - Slc50a1 protein_coding retained_intron MGP_WSBEiJ_T0060760.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88752829 88755110 - Slc50a1 protein_coding retained_intron MGP_WSBEiJ_T0060761.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88752829 88755079 - MGP_WSBEiJ_P0060761 Slc50a1 protein_coding protein_coding MGP_WSBEiJ_T0060762.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88752829 88755154 - MGP_WSBEiJ_P0060762 Slc50a1 protein_coding protein_coding MGP_WSBEiJ_T0060763.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88752829 88755063 - MGP_WSBEiJ_P0060763 Slc50a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060764.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88752831 88755109 - Slc50a1 protein_coding retained_intron MGP_WSBEiJ_T0060765.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88752831 88755153 - Slc50a1 protein_coding retained_intron MGP_WSBEiJ_T0060766.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88753654 88755154 - MGP_WSBEiJ_P0060766 Slc50a1 protein_coding protein_coding MGP_WSBEiJ_T0060767.1 MGP_WSBEiJ_G0026671.1 mouse_genomes_project 3 88753728 88754811 - Slc50a1 protein_coding processed_transcript MGP_WSBEiJ_T0013904.1 MGP_WSBEiJ_G0012034.1 mouse_genomes_project 3 125501052 125502063 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063426.1 MGP_WSBEiJ_G0027250.1 mouse_genomes_project 3 161126315 161388948 - MGP_WSBEiJ_P0063426 Lrrc7 protein_coding protein_coding MGP_WSBEiJ_T0063427.1 MGP_WSBEiJ_G0027250.1 mouse_genomes_project 3 161126319 161605086 - MGP_WSBEiJ_P0063427 Lrrc7 protein_coding protein_coding MGP_WSBEiJ_T0063428.1 MGP_WSBEiJ_G0027250.1 mouse_genomes_project 3 161127416 161388968 - MGP_WSBEiJ_P0063428 Lrrc7 protein_coding protein_coding MGP_WSBEiJ_T0063429.1 MGP_WSBEiJ_G0027250.1 mouse_genomes_project 3 161128736 161605086 - MGP_WSBEiJ_P0063429 Lrrc7 protein_coding protein_coding MGP_WSBEiJ_T0063430.1 MGP_WSBEiJ_G0027250.1 mouse_genomes_project 3 161449040 161604210 - Lrrc7 protein_coding retained_intron MGP_WSBEiJ_T0063431.1 MGP_WSBEiJ_G0027250.1 mouse_genomes_project 3 161489018 161604201 - Lrrc7 protein_coding retained_intron MGP_WSBEiJ_T0060235.1 MGP_WSBEiJ_G0026569.1 mouse_genomes_project 3 81474232 81499621 + MGP_WSBEiJ_P0060235 Map9 protein_coding protein_coding MGP_WSBEiJ_T0060236.1 MGP_WSBEiJ_G0026569.1 mouse_genomes_project 3 81474260 81511484 + MGP_WSBEiJ_P0060236 Map9 protein_coding protein_coding MGP_WSBEiJ_T0060237.1 MGP_WSBEiJ_G0026569.1 mouse_genomes_project 3 81474260 81495050 + MGP_WSBEiJ_P0060237 Map9 protein_coding protein_coding MGP_WSBEiJ_T0060238.1 MGP_WSBEiJ_G0026569.1 mouse_genomes_project 3 81474358 81499557 + MGP_WSBEiJ_P0060238 Map9 protein_coding protein_coding MGP_WSBEiJ_T0060239.1 MGP_WSBEiJ_G0026569.1 mouse_genomes_project 3 81474375 81511484 + MGP_WSBEiJ_P0060239 Map9 protein_coding protein_coding MGP_WSBEiJ_T0060240.1 MGP_WSBEiJ_G0026569.1 mouse_genomes_project 3 81495801 81497965 + Map9 protein_coding retained_intron MGP_WSBEiJ_T0060241.1 MGP_WSBEiJ_G0026569.1 mouse_genomes_project 3 81496162 81499339 + MGP_WSBEiJ_P0060241 Map9 protein_coding protein_coding MGP_WSBEiJ_T0001090.1 MGP_WSBEiJ_G0001022.1 mouse_genomes_project 3 25604325 25606063 + TEC TEC MGP_WSBEiJ_T0001089.1 MGP_WSBEiJ_G0001021.1 mouse_genomes_project 3 24765572 24766794 + TEC TEC MGP_WSBEiJ_T0013955.1 MGP_WSBEiJ_G0012085.1 mouse_genomes_project 3 142992531 142993069 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062452.1 MGP_WSBEiJ_G0027080.1 mouse_genomes_project 3 124401669 124407972 - MGP_WSBEiJ_P0062452 Gm10959 protein_coding protein_coding MGP_WSBEiJ_T0007406.1 MGP_WSBEiJ_G0006073.1 mouse_genomes_project 3 39004295 39019333 + Gm30852 lincRNA lincRNA MGP_WSBEiJ_T0007407.1 MGP_WSBEiJ_G0006073.1 mouse_genomes_project 3 39017827 39043770 + Gm30852 lincRNA lincRNA MGP_WSBEiJ_T0001302.1 MGP_WSBEiJ_G0001232.1 mouse_genomes_project 3 129380530 129382924 - TEC TEC MGP_WSBEiJ_T0007627.1 MGP_WSBEiJ_G0006244.1 mouse_genomes_project 3 146081114 146174466 + Gm42705 lincRNA lincRNA MGP_WSBEiJ_T0061072.1 MGP_WSBEiJ_G0026768.1 mouse_genomes_project 3 92713999 92724605 + MGP_WSBEiJ_P0061072 protein_coding protein_coding MGP_WSBEiJ_T0099441.1 MGP_WSBEiJ_G0038104.1 mouse_genomes_project 3 74608870 74609005 + Gm25846 snoRNA snoRNA MGP_WSBEiJ_T0013604.1 MGP_WSBEiJ_G0011734.1 mouse_genomes_project 3 29694086 29694858 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001255.1 MGP_WSBEiJ_G0001185.1 mouse_genomes_project 3 111113372 111114139 - TEC TEC MGP_WSBEiJ_T0097334.1 MGP_WSBEiJ_G0036008.1 mouse_genomes_project 3 98468132 98471185 + Gm43189 sense_intronic sense_intronic MGP_WSBEiJ_T0062310.1 MGP_WSBEiJ_G0027053.1 mouse_genomes_project 3 117795385 117836223 - MGP_WSBEiJ_P0062310 Gm43191 protein_coding protein_coding MGP_WSBEiJ_T0060022.1 MGP_WSBEiJ_G0026519.1 mouse_genomes_project 3 65543576 65553168 - MGP_WSBEiJ_P0060022 Shox2 protein_coding protein_coding MGP_WSBEiJ_T0060023.1 MGP_WSBEiJ_G0026519.1 mouse_genomes_project 3 65543631 65553621 - MGP_WSBEiJ_P0060023 Shox2 protein_coding protein_coding MGP_WSBEiJ_T0060024.1 MGP_WSBEiJ_G0026519.1 mouse_genomes_project 3 65545510 65553112 - MGP_WSBEiJ_P0060024 Shox2 protein_coding protein_coding MGP_WSBEiJ_T0060025.1 MGP_WSBEiJ_G0026519.1 mouse_genomes_project 3 65545758 65550679 - MGP_WSBEiJ_P0060025 Shox2 protein_coding protein_coding MGP_WSBEiJ_T0059025.1 MGP_WSBEiJ_G0026325.1 mouse_genomes_project 3 12521629 12560142 - protein_coding retained_intron MGP_WSBEiJ_T0059026.1 MGP_WSBEiJ_G0026325.1 mouse_genomes_project 3 12522696 12560179 - MGP_WSBEiJ_P0059026 protein_coding protein_coding MGP_WSBEiJ_T0100808.1 MGP_WSBEiJ_G0039266.1 mouse_genomes_project 3 159843099 159843574 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013552.1 MGP_WSBEiJ_G0011682.1 mouse_genomes_project 3 10355477 10355878 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098162.1 MGP_WSBEiJ_G0036825.1 mouse_genomes_project 3 56512325 56512432 - Gm26166 snRNA snRNA MGP_WSBEiJ_T0001288.1 MGP_WSBEiJ_G0001218.1 mouse_genomes_project 3 128262255 128262907 + TEC TEC MGP_WSBEiJ_T0007460.1 MGP_WSBEiJ_G0006112.1 mouse_genomes_project 3 74860771 74910630 + Gm37256 lincRNA lincRNA MGP_WSBEiJ_T0058952.1 MGP_WSBEiJ_G0026299.1 mouse_genomes_project 3 6263462 6458162 - MGP_WSBEiJ_P0058952 Zfp704 protein_coding protein_coding MGP_WSBEiJ_T0058953.1 MGP_WSBEiJ_G0026299.1 mouse_genomes_project 3 6274776 6409909 - MGP_WSBEiJ_P0058953 Zfp704 protein_coding protein_coding MGP_WSBEiJ_T0058954.1 MGP_WSBEiJ_G0026299.1 mouse_genomes_project 3 6275184 6277525 - Zfp704 protein_coding retained_intron MGP_WSBEiJ_T0099421.1 MGP_WSBEiJ_G0038084.1 mouse_genomes_project 3 25126830 25126991 + Gm26040 snoRNA snoRNA MGP_WSBEiJ_T0013764.1 MGP_WSBEiJ_G0011894.1 mouse_genomes_project 3 79463065 79463377 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013592.1 MGP_WSBEiJ_G0011722.1 mouse_genomes_project 3 22313754 22313934 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004190.1 MGP_WSBEiJ_G0003685.1 mouse_genomes_project 3 86053805 86065228 - Gm37876 antisense antisense MGP_WSBEiJ_T0004303.1 MGP_WSBEiJ_G0003758.1 mouse_genomes_project 3 137319216 137321672 - 4930539J05Rik antisense antisense MGP_WSBEiJ_T0004304.1 MGP_WSBEiJ_G0003758.1 mouse_genomes_project 3 137319233 137320767 - 4930539J05Rik antisense antisense MGP_WSBEiJ_T0061414.1 MGP_WSBEiJ_G0026834.1 mouse_genomes_project 3 95859945 95867994 - MGP_WSBEiJ_P0061414 BC028528 protein_coding protein_coding MGP_WSBEiJ_T0061415.1 MGP_WSBEiJ_G0026834.1 mouse_genomes_project 3 95859949 95867944 - MGP_WSBEiJ_P0061415 BC028528 protein_coding protein_coding MGP_WSBEiJ_T0061416.1 MGP_WSBEiJ_G0026834.1 mouse_genomes_project 3 95860959 95867919 - MGP_WSBEiJ_P0061416 BC028528 protein_coding protein_coding MGP_WSBEiJ_T0061417.1 MGP_WSBEiJ_G0026834.1 mouse_genomes_project 3 95863934 95867940 - BC028528 protein_coding processed_transcript MGP_WSBEiJ_T0061418.1 MGP_WSBEiJ_G0026834.1 mouse_genomes_project 3 95864421 95867970 - BC028528 protein_coding retained_intron MGP_WSBEiJ_T0099427.1 MGP_WSBEiJ_G0038090.1 mouse_genomes_project 3 39092037 39092162 - Gm25487 snoRNA snoRNA MGP_WSBEiJ_T0059994.1 MGP_WSBEiJ_G0026514.1 mouse_genomes_project 3 64089223 64118419 + MGP_WSBEiJ_P0059994 Tiparp protein_coding protein_coding MGP_WSBEiJ_T0059995.1 MGP_WSBEiJ_G0026514.1 mouse_genomes_project 3 64089273 64110520 + MGP_WSBEiJ_P0059995 Tiparp protein_coding protein_coding MGP_WSBEiJ_T0059996.1 MGP_WSBEiJ_G0026514.1 mouse_genomes_project 3 64108963 64115533 + Tiparp protein_coding processed_transcript MGP_WSBEiJ_T0001298.1 MGP_WSBEiJ_G0001228.1 mouse_genomes_project 3 128860267 128863467 - TEC TEC MGP_WSBEiJ_T0061089.1 MGP_WSBEiJ_G0026778.1 mouse_genomes_project 3 93254184 93257411 + MGP_WSBEiJ_P0061089 Tchhl1 protein_coding protein_coding MGP_WSBEiJ_T0007622.1 MGP_WSBEiJ_G0006240.1 mouse_genomes_project 3 145905311 145917876 + Gm33651 lincRNA lincRNA MGP_WSBEiJ_T0013584.1 MGP_WSBEiJ_G0011714.1 mouse_genomes_project 3 18147827 18148335 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098199.1 MGP_WSBEiJ_G0036862.1 mouse_genomes_project 3 96498525 96498691 + Rnu1b6 snRNA snRNA MGP_WSBEiJ_T0013647.1 MGP_WSBEiJ_G0011777.1 mouse_genomes_project 3 43560718 43560977 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061930.1 MGP_WSBEiJ_G0026963.1 mouse_genomes_project 3 106601984 106608562 + Wdr77 protein_coding retained_intron MGP_WSBEiJ_T0061931.1 MGP_WSBEiJ_G0026963.1 mouse_genomes_project 3 106601990 106612510 + MGP_WSBEiJ_P0061931 Wdr77 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061932.1 MGP_WSBEiJ_G0026963.1 mouse_genomes_project 3 106602060 106615248 + MGP_WSBEiJ_P0061932 Wdr77 protein_coding protein_coding MGP_WSBEiJ_T0061933.1 MGP_WSBEiJ_G0026963.1 mouse_genomes_project 3 106606920 106608022 + Wdr77 protein_coding retained_intron MGP_WSBEiJ_T0007586.1 MGP_WSBEiJ_G0006207.1 mouse_genomes_project 3 132693961 132696714 + Gm43351 lincRNA lincRNA MGP_WSBEiJ_T0061893.1 MGP_WSBEiJ_G0026952.1 mouse_genomes_project 3 105562631 105579642 - MGP_WSBEiJ_P0061893 Wnt2b protein_coding protein_coding MGP_WSBEiJ_T0061894.1 MGP_WSBEiJ_G0026952.1 mouse_genomes_project 3 105578133 105579442 - Wnt2b protein_coding retained_intron MGP_WSBEiJ_T0060036.1 MGP_WSBEiJ_G0026521.1 mouse_genomes_project 3 65946132 65974740 + MGP_WSBEiJ_P0060036 Mlf1 protein_coding protein_coding MGP_WSBEiJ_T0060037.1 MGP_WSBEiJ_G0026521.1 mouse_genomes_project 3 65946160 65953376 + Mlf1 protein_coding processed_transcript MGP_WSBEiJ_T0060038.1 MGP_WSBEiJ_G0026521.1 mouse_genomes_project 3 65946177 65970028 + MGP_WSBEiJ_P0060038 Mlf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060039.1 MGP_WSBEiJ_G0026521.1 mouse_genomes_project 3 65946183 65974745 + MGP_WSBEiJ_P0060039 Mlf1 protein_coding protein_coding MGP_WSBEiJ_T0061582.1 MGP_WSBEiJ_G0026881.1 mouse_genomes_project 3 97814579 97816245 - MGP_WSBEiJ_P0061582 Gm17651 protein_coding protein_coding MGP_WSBEiJ_T0061404.1 MGP_WSBEiJ_G0026832.1 mouse_genomes_project 3 95837008 95837607 - Mrps21 protein_coding processed_transcript MGP_WSBEiJ_T0061405.1 MGP_WSBEiJ_G0026832.1 mouse_genomes_project 3 95837008 95845972 - MGP_WSBEiJ_P0061405 Mrps21 protein_coding protein_coding MGP_WSBEiJ_T0061406.1 MGP_WSBEiJ_G0026832.1 mouse_genomes_project 3 95837008 95845072 - MGP_WSBEiJ_P0061406 Mrps21 protein_coding protein_coding MGP_WSBEiJ_T0061407.1 MGP_WSBEiJ_G0026832.1 mouse_genomes_project 3 95837183 95845820 - MGP_WSBEiJ_P0061407 Mrps21 protein_coding protein_coding MGP_WSBEiJ_T0061474.1 MGP_WSBEiJ_G0026856.1 mouse_genomes_project 3 96609520 96613448 + MGP_WSBEiJ_P0061474 Txnip protein_coding protein_coding MGP_WSBEiJ_T0061475.1 MGP_WSBEiJ_G0026856.1 mouse_genomes_project 3 96609523 96613422 + MGP_WSBEiJ_P0061475 Txnip protein_coding protein_coding MGP_WSBEiJ_T0061476.1 MGP_WSBEiJ_G0026856.1 mouse_genomes_project 3 96611062 96611578 + Txnip protein_coding retained_intron MGP_WSBEiJ_T0061477.1 MGP_WSBEiJ_G0026856.1 mouse_genomes_project 3 96611075 96611769 + Txnip protein_coding processed_transcript MGP_WSBEiJ_T0061478.1 MGP_WSBEiJ_G0026856.1 mouse_genomes_project 3 96611287 96613423 + Txnip protein_coding processed_transcript MGP_WSBEiJ_T0061479.1 MGP_WSBEiJ_G0026856.1 mouse_genomes_project 3 96611618 96612130 + Txnip protein_coding retained_intron MGP_WSBEiJ_T0059896.1 MGP_WSBEiJ_G0026488.1 mouse_genomes_project 3 57494329 57505641 - MGP_WSBEiJ_P0059896 P2ry12 protein_coding protein_coding MGP_WSBEiJ_T0059897.1 MGP_WSBEiJ_G0026488.1 mouse_genomes_project 3 57494416 57543133 - MGP_WSBEiJ_P0059897 P2ry12 protein_coding protein_coding MGP_WSBEiJ_T0059898.1 MGP_WSBEiJ_G0026488.1 mouse_genomes_project 3 57494417 57498317 - MGP_WSBEiJ_P0059898 P2ry12 protein_coding protein_coding MGP_WSBEiJ_T0059899.1 MGP_WSBEiJ_G0026488.1 mouse_genomes_project 3 57494418 57543173 - MGP_WSBEiJ_P0059899 P2ry12 protein_coding protein_coding MGP_WSBEiJ_T0059900.1 MGP_WSBEiJ_G0026488.1 mouse_genomes_project 3 57495962 57498258 - MGP_WSBEiJ_P0059900 P2ry12 protein_coding protein_coding MGP_WSBEiJ_T0001359.1 MGP_WSBEiJ_G0001288.1 mouse_genomes_project 3 160095372 160096937 + TEC TEC MGP_WSBEiJ_T0060316.1 MGP_WSBEiJ_G0026590.1 mouse_genomes_project 3 84831939 84908652 + MGP_WSBEiJ_P0060316 Gatb protein_coding protein_coding MGP_WSBEiJ_T0060317.1 MGP_WSBEiJ_G0026590.1 mouse_genomes_project 3 84831939 84899600 + MGP_WSBEiJ_P0060317 Gatb protein_coding protein_coding MGP_WSBEiJ_T0060318.1 MGP_WSBEiJ_G0026590.1 mouse_genomes_project 3 84831947 84905855 + MGP_WSBEiJ_P0060318 Gatb protein_coding protein_coding MGP_WSBEiJ_T0060319.1 MGP_WSBEiJ_G0026590.1 mouse_genomes_project 3 84831952 84833862 + Gatb protein_coding processed_transcript MGP_WSBEiJ_T0060320.1 MGP_WSBEiJ_G0026590.1 mouse_genomes_project 3 84832015 84907179 + Gatb protein_coding processed_transcript MGP_WSBEiJ_T0013972.1 MGP_WSBEiJ_G0012102.1 mouse_genomes_project 3 149783935 149784386 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061336.1 MGP_WSBEiJ_G0026822.1 mouse_genomes_project 3 95474847 95508901 + MGP_WSBEiJ_P0061336 Ctss protein_coding protein_coding MGP_WSBEiJ_T0061337.1 MGP_WSBEiJ_G0026822.1 mouse_genomes_project 3 95474955 95508907 + MGP_WSBEiJ_P0061337 Ctss protein_coding protein_coding MGP_WSBEiJ_T0001152.1 MGP_WSBEiJ_G0001084.1 mouse_genomes_project 3 49267665 49269290 + TEC TEC MGP_WSBEiJ_T0004181.1 MGP_WSBEiJ_G0003679.1 mouse_genomes_project 3 78916873 78945463 - Gm36569 antisense antisense MGP_WSBEiJ_T0061727.1 MGP_WSBEiJ_G0026923.1 mouse_genomes_project 3 103432596 103456833 - MGP_WSBEiJ_P0061727 Nr1h5 protein_coding protein_coding MGP_WSBEiJ_T0061728.1 MGP_WSBEiJ_G0026923.1 mouse_genomes_project 3 103433808 103451200 - MGP_WSBEiJ_P0061728 Nr1h5 protein_coding protein_coding MGP_WSBEiJ_T0061729.1 MGP_WSBEiJ_G0026923.1 mouse_genomes_project 3 103433808 103451200 - MGP_WSBEiJ_P0061729 Nr1h5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061730.1 MGP_WSBEiJ_G0026923.1 mouse_genomes_project 3 103433808 103451200 - MGP_WSBEiJ_P0061730 Nr1h5 protein_coding protein_coding MGP_WSBEiJ_T0061731.1 MGP_WSBEiJ_G0026923.1 mouse_genomes_project 3 103433808 103451200 - MGP_WSBEiJ_P0061731 Nr1h5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060410.1 MGP_WSBEiJ_G0026610.1 mouse_genomes_project 3 87112048 87128991 - MGP_WSBEiJ_P0060410 Ntrk1 protein_coding protein_coding MGP_WSBEiJ_T0059947.1 MGP_WSBEiJ_G0026501.1 mouse_genomes_project 3 60868288 60912831 - MGP_WSBEiJ_P0059947 Dhx36 protein_coding protein_coding MGP_WSBEiJ_T0059948.1 MGP_WSBEiJ_G0026501.1 mouse_genomes_project 3 60870920 60872862 - Dhx36 protein_coding retained_intron MGP_WSBEiJ_T0059949.1 MGP_WSBEiJ_G0026501.1 mouse_genomes_project 3 60890836 60895272 - Dhx36 protein_coding retained_intron MGP_WSBEiJ_T0059950.1 MGP_WSBEiJ_G0026501.1 mouse_genomes_project 3 60904586 60908789 - Dhx36 protein_coding retained_intron MGP_WSBEiJ_T0004198.1 MGP_WSBEiJ_G0003691.1 mouse_genomes_project 3 88802260 88805984 + Gm15998 antisense antisense MGP_WSBEiJ_T0013774.1 MGP_WSBEiJ_G0011904.1 mouse_genomes_project 3 85417220 85417653 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060773.1 MGP_WSBEiJ_G0026674.1 mouse_genomes_project 3 88820533 88825183 - MGP_WSBEiJ_P0060773 Efna4 protein_coding protein_coding MGP_WSBEiJ_T0004229.1 MGP_WSBEiJ_G0003711.1 mouse_genomes_project 3 96908837 96911108 - 4930442L01Rik antisense antisense MGP_WSBEiJ_T0061813.1 MGP_WSBEiJ_G0026937.1 mouse_genomes_project 3 104341109 104354565 + MGP_WSBEiJ_P0061813 protein_coding protein_coding MGP_WSBEiJ_T0061815.1 MGP_WSBEiJ_G0026937.1 mouse_genomes_project 3 104341182 104354370 + MGP_WSBEiJ_P0061815 protein_coding protein_coding MGP_WSBEiJ_T0061816.1 MGP_WSBEiJ_G0026937.1 mouse_genomes_project 3 104341189 104354565 + MGP_WSBEiJ_P0061816 protein_coding protein_coding MGP_WSBEiJ_T0061817.1 MGP_WSBEiJ_G0026937.1 mouse_genomes_project 3 104341217 104354567 + MGP_WSBEiJ_P0061817 protein_coding protein_coding MGP_WSBEiJ_T0061818.1 MGP_WSBEiJ_G0026937.1 mouse_genomes_project 3 104341425 104354303 + MGP_WSBEiJ_P0061818 protein_coding protein_coding MGP_WSBEiJ_T0061819.1 MGP_WSBEiJ_G0026937.1 mouse_genomes_project 3 104341453 104346461 + protein_coding processed_transcript MGP_WSBEiJ_T0061820.1 MGP_WSBEiJ_G0026937.1 mouse_genomes_project 3 104346650 104353226 + MGP_WSBEiJ_P0061820 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0013684.1 MGP_WSBEiJ_G0011814.1 mouse_genomes_project 3 55470786 55471415 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060714.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686581 88691940 - MGP_WSBEiJ_P0060714 Mtx1 protein_coding protein_coding MGP_WSBEiJ_T0060715.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686586 88687843 - MGP_WSBEiJ_P0060715 Mtx1 protein_coding protein_coding MGP_WSBEiJ_T0060716.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686587 88687165 - Mtx1 protein_coding retained_intron MGP_WSBEiJ_T0060717.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686587 88687601 - Mtx1 protein_coding processed_transcript MGP_WSBEiJ_T0060718.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686587 88691867 - MGP_WSBEiJ_P0060718 Mtx1 protein_coding protein_coding MGP_WSBEiJ_T0060719.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686589 88687628 - MGP_WSBEiJ_P0060719 Mtx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060720.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686592 88691417 - MGP_WSBEiJ_P0060720 Mtx1 protein_coding protein_coding MGP_WSBEiJ_T0060721.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686707 88691403 - MGP_WSBEiJ_P0060721 Mtx1 protein_coding protein_coding MGP_WSBEiJ_T0060722.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686713 88691350 - MGP_WSBEiJ_P0060722 Mtx1 protein_coding protein_coding MGP_WSBEiJ_T0060723.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686828 88691422 - MGP_WSBEiJ_P0060723 Mtx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060724.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686856 88705405 - MGP_WSBEiJ_P0060724 Mtx1 protein_coding protein_coding MGP_WSBEiJ_T0060725.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88686914 88688343 - Mtx1 protein_coding retained_intron MGP_WSBEiJ_T0060726.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88687146 88688230 - Mtx1 protein_coding retained_intron MGP_WSBEiJ_T0060727.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88687251 88691372 - Mtx1 protein_coding retained_intron MGP_WSBEiJ_T0060728.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88687538 88691395 - MGP_WSBEiJ_P0060728 Mtx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060729.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88687766 88691387 - Mtx1 protein_coding retained_intron MGP_WSBEiJ_T0060730.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88688182 88691336 - MGP_WSBEiJ_P0060730 Mtx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060737.1 MGP_WSBEiJ_G0026665.1 mouse_genomes_project 3 88702457 88705441 - Mtx1 protein_coding processed_transcript MGP_WSBEiJ_T0001138.1 MGP_WSBEiJ_G0001070.1 mouse_genomes_project 3 43041602 43043143 - TEC TEC MGP_WSBEiJ_T0004179.1 MGP_WSBEiJ_G0003677.1 mouse_genomes_project 3 64546354 64550633 + Gm37305 antisense antisense MGP_WSBEiJ_T0061026.1 MGP_WSBEiJ_G0026728.1 mouse_genomes_project 3 91836181 91837930 - MGP_WSBEiJ_P0061026 Prr9 protein_coding protein_coding MGP_WSBEiJ_T0061494.1 MGP_WSBEiJ_G0026863.1 mouse_genomes_project 3 96693100 96710730 + MGP_WSBEiJ_P0061494 Gm42957 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062057.1 MGP_WSBEiJ_G0026998.1 mouse_genomes_project 3 108693632 108746128 - Gstm2 protein_coding retained_intron MGP_WSBEiJ_T0062059.1 MGP_WSBEiJ_G0026998.1 mouse_genomes_project 3 108738186 108746160 - MGP_WSBEiJ_P0062059 Gstm2 protein_coding protein_coding MGP_WSBEiJ_T0062060.1 MGP_WSBEiJ_G0026998.1 mouse_genomes_project 3 108738431 108746067 - MGP_WSBEiJ_P0062060 Gstm2 protein_coding protein_coding MGP_WSBEiJ_T0062061.1 MGP_WSBEiJ_G0026998.1 mouse_genomes_project 3 108738533 108746100 - MGP_WSBEiJ_P0062061 Gstm2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062062.1 MGP_WSBEiJ_G0026998.1 mouse_genomes_project 3 108745188 108746128 - Gstm2 protein_coding retained_intron MGP_WSBEiJ_T0007637.1 MGP_WSBEiJ_G0006252.1 mouse_genomes_project 3 148559234 148560473 + Gm43861 lincRNA lincRNA MGP_WSBEiJ_T0013702.1 MGP_WSBEiJ_G0011832.1 mouse_genomes_project 3 59094283 59094441 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059489.1 MGP_WSBEiJ_G0026409.1 mouse_genomes_project 3 34888212 34898321 - MGP_WSBEiJ_P0059489 Il21 protein_coding protein_coding MGP_WSBEiJ_T0059490.1 MGP_WSBEiJ_G0026409.1 mouse_genomes_project 3 34890685 34898268 - MGP_WSBEiJ_P0059490 Il21 protein_coding protein_coding MGP_WSBEiJ_T0059491.1 MGP_WSBEiJ_G0026409.1 mouse_genomes_project 3 34895995 34898339 - Il21 protein_coding retained_intron MGP_WSBEiJ_T0001219.1 MGP_WSBEiJ_G0001149.1 mouse_genomes_project 3 79192349 79194674 + TEC TEC MGP_WSBEiJ_T0059426.1 MGP_WSBEiJ_G0026398.1 mouse_genomes_project 3 33767191 33787291 + MGP_WSBEiJ_P0059426 D3Ertd254e protein_coding protein_coding MGP_WSBEiJ_T0059427.1 MGP_WSBEiJ_G0026398.1 mouse_genomes_project 3 33767336 33779815 + MGP_WSBEiJ_P0059427 D3Ertd254e protein_coding protein_coding MGP_WSBEiJ_T0059428.1 MGP_WSBEiJ_G0026398.1 mouse_genomes_project 3 33776660 33787284 + MGP_WSBEiJ_P0059428 D3Ertd254e protein_coding protein_coding MGP_WSBEiJ_T0062468.1 MGP_WSBEiJ_G0027083.1 mouse_genomes_project 3 124574621 124734466 - MGP_WSBEiJ_P0062468 Synpo2 protein_coding protein_coding MGP_WSBEiJ_T0062469.1 MGP_WSBEiJ_G0027083.1 mouse_genomes_project 3 124574621 124734517 - MGP_WSBEiJ_P0062469 Synpo2 protein_coding protein_coding MGP_WSBEiJ_T0062470.1 MGP_WSBEiJ_G0027083.1 mouse_genomes_project 3 124574621 124612911 - MGP_WSBEiJ_P0062470 Synpo2 protein_coding protein_coding MGP_WSBEiJ_T0062471.1 MGP_WSBEiJ_G0027083.1 mouse_genomes_project 3 124606685 124734517 - MGP_WSBEiJ_P0062471 Synpo2 protein_coding protein_coding MGP_WSBEiJ_T0062472.1 MGP_WSBEiJ_G0027083.1 mouse_genomes_project 3 124608769 124613087 - MGP_WSBEiJ_P0062472 Synpo2 protein_coding protein_coding MGP_WSBEiJ_T0062473.1 MGP_WSBEiJ_G0027083.1 mouse_genomes_project 3 124611059 124621334 - MGP_WSBEiJ_P0062473 Synpo2 protein_coding protein_coding MGP_WSBEiJ_T0062474.1 MGP_WSBEiJ_G0027083.1 mouse_genomes_project 3 124677367 124734519 - Synpo2 protein_coding processed_transcript MGP_WSBEiJ_T0013535.1 MGP_WSBEiJ_G0011665.1 mouse_genomes_project 3 5701250 5701586 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007347.1 MGP_WSBEiJ_G0006026.1 mouse_genomes_project 3 10402981 10405672 - Gm2464 lincRNA lincRNA MGP_WSBEiJ_T0098182.1 MGP_WSBEiJ_G0036845.1 mouse_genomes_project 3 88296024 88296186 + Gm23054 snRNA snRNA MGP_WSBEiJ_T0060518.1 MGP_WSBEiJ_G0026634.1 mouse_genomes_project 3 87734617 87753949 + MGP_WSBEiJ_P0060518 Paqr6 protein_coding protein_coding MGP_WSBEiJ_T0060519.1 MGP_WSBEiJ_G0026634.1 mouse_genomes_project 3 87734622 87754453 + MGP_WSBEiJ_P0060519 Paqr6 protein_coding protein_coding MGP_WSBEiJ_T0060520.1 MGP_WSBEiJ_G0026634.1 mouse_genomes_project 3 87734624 87753164 + Paqr6 protein_coding processed_transcript MGP_WSBEiJ_T0060521.1 MGP_WSBEiJ_G0026634.1 mouse_genomes_project 3 87734626 87735836 + Paqr6 protein_coding retained_intron MGP_WSBEiJ_T0060522.1 MGP_WSBEiJ_G0026634.1 mouse_genomes_project 3 87752642 87754453 + Paqr6 protein_coding retained_intron MGP_WSBEiJ_T0004183.1 MGP_WSBEiJ_G0003681.1 mouse_genomes_project 3 80134011 80138419 - Gm16000 antisense antisense MGP_WSBEiJ_T0098228.1 MGP_WSBEiJ_G0036891.1 mouse_genomes_project 3 160268254 160268361 - Gm23725 snRNA snRNA MGP_WSBEiJ_T0062986.1 MGP_WSBEiJ_G0027177.1 mouse_genomes_project 3 144775509 144779979 + MGP_WSBEiJ_P0062986 Gbp3 protein_coding protein_coding MGP_WSBEiJ_T0062987.1 MGP_WSBEiJ_G0027177.1 mouse_genomes_project 3 144775535 144791268 + MGP_WSBEiJ_P0062987 Gbp3 protein_coding protein_coding MGP_WSBEiJ_T0062988.1 MGP_WSBEiJ_G0027177.1 mouse_genomes_project 3 144775627 144782256 + MGP_WSBEiJ_P0062988 Gbp3 protein_coding protein_coding MGP_WSBEiJ_T0062989.1 MGP_WSBEiJ_G0027177.1 mouse_genomes_project 3 144775629 144791275 + MGP_WSBEiJ_P0062989 Gbp3 protein_coding protein_coding MGP_WSBEiJ_T0062990.1 MGP_WSBEiJ_G0027177.1 mouse_genomes_project 3 144775659 144783575 + Gbp3 protein_coding processed_transcript MGP_WSBEiJ_T0062991.1 MGP_WSBEiJ_G0027177.1 mouse_genomes_project 3 144778481 144791273 + MGP_WSBEiJ_P0062991 Gbp3 protein_coding protein_coding MGP_WSBEiJ_T0062992.1 MGP_WSBEiJ_G0027177.1 mouse_genomes_project 3 144779275 144783121 + MGP_WSBEiJ_P0062992 Gbp3 protein_coding protein_coding MGP_WSBEiJ_T0063249.1 MGP_WSBEiJ_G0027224.1 mouse_genomes_project 3 155130958 155192345 - MGP_WSBEiJ_P0063249 Fam73a protein_coding protein_coding MGP_WSBEiJ_T0063250.1 MGP_WSBEiJ_G0027224.1 mouse_genomes_project 3 155133040 155192343 - MGP_WSBEiJ_P0063250 Fam73a protein_coding protein_coding MGP_WSBEiJ_T0063251.1 MGP_WSBEiJ_G0027224.1 mouse_genomes_project 3 155140029 155192321 - MGP_WSBEiJ_P0063251 Fam73a protein_coding protein_coding MGP_WSBEiJ_T0063252.1 MGP_WSBEiJ_G0027224.1 mouse_genomes_project 3 155140196 155144006 - Fam73a protein_coding retained_intron MGP_WSBEiJ_T0063253.1 MGP_WSBEiJ_G0027224.1 mouse_genomes_project 3 155149002 155177464 - MGP_WSBEiJ_P0063253 Fam73a protein_coding protein_coding MGP_WSBEiJ_T0063254.1 MGP_WSBEiJ_G0027224.1 mouse_genomes_project 3 155149176 155155927 - Fam73a protein_coding retained_intron MGP_WSBEiJ_T0063255.1 MGP_WSBEiJ_G0027224.1 mouse_genomes_project 3 155155469 155188925 - MGP_WSBEiJ_P0063255 Fam73a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063256.1 MGP_WSBEiJ_G0027224.1 mouse_genomes_project 3 155188471 155192322 - Fam73a protein_coding retained_intron MGP_WSBEiJ_T0013804.1 MGP_WSBEiJ_G0011934.1 mouse_genomes_project 3 94468928 94469301 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013746.1 MGP_WSBEiJ_G0011876.1 mouse_genomes_project 3 73207835 73208301 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001133.1 MGP_WSBEiJ_G0001065.1 mouse_genomes_project 3 39443000 39445501 + TEC TEC MGP_WSBEiJ_T0007602.1 MGP_WSBEiJ_G0006222.1 mouse_genomes_project 3 138933037 138935341 - Gm43356 lincRNA lincRNA MGP_WSBEiJ_T0061807.1 MGP_WSBEiJ_G0026936.1 mouse_genomes_project 3 104332145 104340673 - MGP_WSBEiJ_P0061807 Dclre1b protein_coding protein_coding MGP_WSBEiJ_T0061808.1 MGP_WSBEiJ_G0026936.1 mouse_genomes_project 3 104334431 104340909 - Dclre1b protein_coding retained_intron MGP_WSBEiJ_T0061809.1 MGP_WSBEiJ_G0026936.1 mouse_genomes_project 3 104334449 104339784 - MGP_WSBEiJ_P0061809 Dclre1b protein_coding protein_coding MGP_WSBEiJ_T0061810.1 MGP_WSBEiJ_G0026936.1 mouse_genomes_project 3 104335145 104339241 - Dclre1b protein_coding retained_intron MGP_WSBEiJ_T0061811.1 MGP_WSBEiJ_G0026936.1 mouse_genomes_project 3 104335573 104340777 - MGP_WSBEiJ_P0061811 Dclre1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061812.1 MGP_WSBEiJ_G0026936.1 mouse_genomes_project 3 104337479 104340973 - MGP_WSBEiJ_P0061812 Dclre1b protein_coding protein_coding MGP_WSBEiJ_T0060179.1 MGP_WSBEiJ_G0026556.1 mouse_genomes_project 3 78649269 78674900 - MGP_WSBEiJ_P0060179 Etfdh protein_coding protein_coding MGP_WSBEiJ_T0060180.1 MGP_WSBEiJ_G0026556.1 mouse_genomes_project 3 78649284 78674734 - MGP_WSBEiJ_P0060180 Etfdh protein_coding protein_coding MGP_WSBEiJ_T0060181.1 MGP_WSBEiJ_G0026556.1 mouse_genomes_project 3 78661024 78674720 - Etfdh protein_coding retained_intron MGP_WSBEiJ_T0060182.1 MGP_WSBEiJ_G0026556.1 mouse_genomes_project 3 78662613 78674900 - Etfdh protein_coding retained_intron MGP_WSBEiJ_T0060183.1 MGP_WSBEiJ_G0026556.1 mouse_genomes_project 3 78664792 78674755 - Etfdh protein_coding retained_intron MGP_WSBEiJ_T0060184.1 MGP_WSBEiJ_G0026556.1 mouse_genomes_project 3 78674285 78675537 - Etfdh protein_coding retained_intron MGP_WSBEiJ_T0060185.1 MGP_WSBEiJ_G0026556.1 mouse_genomes_project 3 78674303 78674776 - Etfdh protein_coding processed_transcript MGP_WSBEiJ_T0058927.1 MGP_WSBEiJ_G0026292.1 mouse_genomes_project 3 4281263 4329988 + MGP_WSBEiJ_P0058927 Zc2hc1a protein_coding protein_coding MGP_WSBEiJ_T0058928.1 MGP_WSBEiJ_G0026292.1 mouse_genomes_project 3 4281266 4328230 + MGP_WSBEiJ_P0058928 Zc2hc1a protein_coding protein_coding MGP_WSBEiJ_T0058929.1 MGP_WSBEiJ_G0026292.1 mouse_genomes_project 3 4317399 4327655 + Zc2hc1a protein_coding retained_intron MGP_WSBEiJ_T0001210.1 MGP_WSBEiJ_G0001140.1 mouse_genomes_project 3 73896816 73899036 - TEC TEC MGP_WSBEiJ_T0059091.1 MGP_WSBEiJ_G0026340.1 mouse_genomes_project 3 17148184 17212702 + MGP_WSBEiJ_P0059091 Hltf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059092.1 MGP_WSBEiJ_G0026340.1 mouse_genomes_project 3 17148184 17213911 + MGP_WSBEiJ_P0059092 Hltf protein_coding protein_coding MGP_WSBEiJ_T0059093.1 MGP_WSBEiJ_G0026340.1 mouse_genomes_project 3 17148193 17203364 + Hltf protein_coding retained_intron MGP_WSBEiJ_T0059094.1 MGP_WSBEiJ_G0026340.1 mouse_genomes_project 3 17148226 17157004 + Hltf protein_coding retained_intron MGP_WSBEiJ_T0059095.1 MGP_WSBEiJ_G0026340.1 mouse_genomes_project 3 17148658 17213897 + MGP_WSBEiJ_P0059095 Hltf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059096.1 MGP_WSBEiJ_G0026340.1 mouse_genomes_project 3 17203330 17213911 + Hltf protein_coding retained_intron MGP_WSBEiJ_T0001241.1 MGP_WSBEiJ_G0001171.1 mouse_genomes_project 3 97522123 97542251 + TEC TEC MGP_WSBEiJ_T0013713.1 MGP_WSBEiJ_G0011843.1 mouse_genomes_project 3 62350080 62350370 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061964.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267529 107292708 + MGP_WSBEiJ_P0061964 Dram2 protein_coding protein_coding MGP_WSBEiJ_T0061965.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267558 107283250 + Dram2 protein_coding retained_intron MGP_WSBEiJ_T0061966.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267562 107275017 + MGP_WSBEiJ_P0061966 Dram2 protein_coding protein_coding MGP_WSBEiJ_T0061967.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267595 107291661 + MGP_WSBEiJ_P0061967 Dram2 protein_coding protein_coding MGP_WSBEiJ_T0061968.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267601 107283091 + Dram2 protein_coding retained_intron MGP_WSBEiJ_T0061969.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267603 107291661 + MGP_WSBEiJ_P0061969 Dram2 protein_coding protein_coding MGP_WSBEiJ_T0061970.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267608 107287684 + MGP_WSBEiJ_P0061970 Dram2 protein_coding protein_coding MGP_WSBEiJ_T0061971.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267608 107274985 + MGP_WSBEiJ_P0061971 Dram2 protein_coding protein_coding MGP_WSBEiJ_T0061972.1 MGP_WSBEiJ_G0026973.1 mouse_genomes_project 3 107267612 107287621 + MGP_WSBEiJ_P0061972 Dram2 protein_coding protein_coding MGP_WSBEiJ_T0062501.1 MGP_WSBEiJ_G0027090.1 mouse_genomes_project 3 126074027 126099624 - MGP_WSBEiJ_P0062501 1700003H04Rik protein_coding protein_coding MGP_WSBEiJ_T0062502.1 MGP_WSBEiJ_G0027090.1 mouse_genomes_project 3 126074027 126099624 - MGP_WSBEiJ_P0062502 1700003H04Rik protein_coding protein_coding MGP_WSBEiJ_T0062503.1 MGP_WSBEiJ_G0027090.1 mouse_genomes_project 3 126083348 126099625 - MGP_WSBEiJ_P0062503 1700003H04Rik protein_coding protein_coding MGP_WSBEiJ_T0062504.1 MGP_WSBEiJ_G0027090.1 mouse_genomes_project 3 126091751 126099634 - MGP_WSBEiJ_P0062504 1700003H04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062505.1 MGP_WSBEiJ_G0027090.1 mouse_genomes_project 3 126091752 126099627 - MGP_WSBEiJ_P0062505 1700003H04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062506.1 MGP_WSBEiJ_G0027090.1 mouse_genomes_project 3 126091752 126097036 - MGP_WSBEiJ_P0062506 1700003H04Rik protein_coding protein_coding MGP_WSBEiJ_T0061779.1 MGP_WSBEiJ_G0026930.1 mouse_genomes_project 3 103784130 103870850 + MGP_WSBEiJ_P0061779 Trim33 protein_coding protein_coding MGP_WSBEiJ_T0061780.1 MGP_WSBEiJ_G0026930.1 mouse_genomes_project 3 103784621 103867419 + MGP_WSBEiJ_P0061780 Trim33 protein_coding protein_coding MGP_WSBEiJ_T0061781.1 MGP_WSBEiJ_G0026930.1 mouse_genomes_project 3 103820918 103838514 + MGP_WSBEiJ_P0061781 Trim33 protein_coding protein_coding MGP_WSBEiJ_T0061782.1 MGP_WSBEiJ_G0026930.1 mouse_genomes_project 3 103830909 103835791 + Trim33 protein_coding retained_intron MGP_WSBEiJ_T0061783.1 MGP_WSBEiJ_G0026930.1 mouse_genomes_project 3 103835448 103836798 + Trim33 protein_coding retained_intron MGP_WSBEiJ_T0061784.1 MGP_WSBEiJ_G0026930.1 mouse_genomes_project 3 103835540 103865598 + MGP_WSBEiJ_P0061784 Trim33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001075.1 MGP_WSBEiJ_G0001007.1 mouse_genomes_project 3 5555171 5558307 - TEC TEC MGP_WSBEiJ_T0062092.1 MGP_WSBEiJ_G0027007.1 mouse_genomes_project 3 108970621 108975769 - MGP_WSBEiJ_P0062092 Cyb561d1 protein_coding protein_coding MGP_WSBEiJ_T0062093.1 MGP_WSBEiJ_G0027007.1 mouse_genomes_project 3 108970705 108976147 - Cyb561d1 protein_coding processed_transcript MGP_WSBEiJ_T0062094.1 MGP_WSBEiJ_G0027007.1 mouse_genomes_project 3 108970705 108975769 - MGP_WSBEiJ_P0062094 Cyb561d1 protein_coding protein_coding MGP_WSBEiJ_T0062095.1 MGP_WSBEiJ_G0027007.1 mouse_genomes_project 3 108973207 108975530 - MGP_WSBEiJ_P0062095 Cyb561d1 protein_coding protein_coding MGP_WSBEiJ_T0059626.1 MGP_WSBEiJ_G0026431.1 mouse_genomes_project 3 43149217 43153864 + MGP_WSBEiJ_P0059626 Pcdh10 protein_coding protein_coding MGP_WSBEiJ_T0059627.1 MGP_WSBEiJ_G0026431.1 mouse_genomes_project 3 43149225 43174122 + MGP_WSBEiJ_P0059627 Pcdh10 protein_coding protein_coding MGP_WSBEiJ_T0059628.1 MGP_WSBEiJ_G0026431.1 mouse_genomes_project 3 43149244 43210890 + MGP_WSBEiJ_P0059628 Pcdh10 protein_coding protein_coding MGP_WSBEiJ_T0059629.1 MGP_WSBEiJ_G0026431.1 mouse_genomes_project 3 43149246 43196921 + MGP_WSBEiJ_P0059629 Pcdh10 protein_coding protein_coding MGP_WSBEiJ_T0059630.1 MGP_WSBEiJ_G0026431.1 mouse_genomes_project 3 43153461 43207755 + Pcdh10 protein_coding processed_transcript MGP_WSBEiJ_T0004269.1 MGP_WSBEiJ_G0003731.1 mouse_genomes_project 3 109513897 109517956 + Gm27244 antisense antisense MGP_WSBEiJ_T0004180.1 MGP_WSBEiJ_G0003678.1 mouse_genomes_project 3 78241806 78284411 + 4921511C10Rik antisense antisense MGP_WSBEiJ_T0062803.1 MGP_WSBEiJ_G0027141.1 mouse_genomes_project 3 137290116 137306916 - MGP_WSBEiJ_P0062803 Cisd2 protein_coding protein_coding MGP_WSBEiJ_T0062804.1 MGP_WSBEiJ_G0027141.1 mouse_genomes_project 3 137293763 137306398 - MGP_WSBEiJ_P0062804 Cisd2 protein_coding protein_coding MGP_WSBEiJ_T0062805.1 MGP_WSBEiJ_G0027141.1 mouse_genomes_project 3 137302940 137306395 - Cisd2 protein_coding retained_intron MGP_WSBEiJ_T0062806.1 MGP_WSBEiJ_G0027141.1 mouse_genomes_project 3 137303846 137306070 - Cisd2 protein_coding processed_transcript MGP_WSBEiJ_T0013814.1 MGP_WSBEiJ_G0011944.1 mouse_genomes_project 3 96426200 96427622 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058936.1 MGP_WSBEiJ_G0026295.1 mouse_genomes_project 3 5467918 5471815 - MGP_WSBEiJ_P0058936 Hey1 protein_coding protein_coding MGP_WSBEiJ_T0058937.1 MGP_WSBEiJ_G0026295.1 mouse_genomes_project 3 5469258 5471543 - Hey1 protein_coding retained_intron MGP_WSBEiJ_T0058938.1 MGP_WSBEiJ_G0026295.1 mouse_genomes_project 3 5469355 5471184 - Hey1 protein_coding retained_intron MGP_WSBEiJ_T0058939.1 MGP_WSBEiJ_G0026295.1 mouse_genomes_project 3 5470101 5471523 - Hey1 protein_coding retained_intron MGP_WSBEiJ_T0004123.1 MGP_WSBEiJ_G0003637.1 mouse_genomes_project 3 23514503 23515732 + A830092H15Rik antisense antisense MGP_WSBEiJ_T0004124.1 MGP_WSBEiJ_G0003637.1 mouse_genomes_project 3 23515304 23516719 + A830092H15Rik antisense antisense MGP_WSBEiJ_T0060113.1 MGP_WSBEiJ_G0026540.1 mouse_genomes_project 3 68490661 68530787 - MGP_WSBEiJ_P0060113 Sptssb protein_coding protein_coding MGP_WSBEiJ_T0060114.1 MGP_WSBEiJ_G0026540.1 mouse_genomes_project 3 68491697 68530769 - MGP_WSBEiJ_P0060114 Sptssb protein_coding protein_coding MGP_WSBEiJ_T0061037.1 MGP_WSBEiJ_G0026737.1 mouse_genomes_project 3 92134173 92135813 + MGP_WSBEiJ_P0061037 Sprr2h protein_coding protein_coding MGP_WSBEiJ_T0061038.1 MGP_WSBEiJ_G0026737.1 mouse_genomes_project 3 92134188 92135589 + MGP_WSBEiJ_P0061038 Sprr2h protein_coding protein_coding MGP_WSBEiJ_T0059123.1 MGP_WSBEiJ_G0026347.1 mouse_genomes_project 3 22556234 23515814 - MGP_WSBEiJ_P0059123 Nlgn1 protein_coding protein_coding MGP_WSBEiJ_T0059124.1 MGP_WSBEiJ_G0026347.1 mouse_genomes_project 3 22564151 23306541 - MGP_WSBEiJ_P0059124 Nlgn1 protein_coding protein_coding MGP_WSBEiJ_T0059125.1 MGP_WSBEiJ_G0026347.1 mouse_genomes_project 3 22564151 23306541 - MGP_WSBEiJ_P0059125 Nlgn1 protein_coding protein_coding MGP_WSBEiJ_T0059126.1 MGP_WSBEiJ_G0026347.1 mouse_genomes_project 3 22565771 23328237 - MGP_WSBEiJ_P0059126 Nlgn1 protein_coding protein_coding MGP_WSBEiJ_T0059127.1 MGP_WSBEiJ_G0026347.1 mouse_genomes_project 3 23304476 23515224 - Nlgn1 protein_coding retained_intron MGP_WSBEiJ_T0007607.1 MGP_WSBEiJ_G0006227.1 mouse_genomes_project 3 140031498 140049476 + Gm19708 lincRNA lincRNA MGP_WSBEiJ_T0007532.1 MGP_WSBEiJ_G0006166.1 mouse_genomes_project 3 104921531 104940964 - Gm5546 lincRNA lincRNA MGP_WSBEiJ_T0017356.1 MGP_WSBEiJ_G0014922.1 mouse_genomes_project 3 34980439 35072084 + Gm43439 processed_transcript processed_transcript MGP_WSBEiJ_T0100275.1 MGP_WSBEiJ_G0038793.1 mouse_genomes_project 3 63328437 63328670 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0061061.1 MGP_WSBEiJ_G0026758.1 mouse_genomes_project 3 92515401 92517263 - MGP_WSBEiJ_P0061061 Lce1h protein_coding protein_coding MGP_WSBEiJ_T0013577.1 MGP_WSBEiJ_G0011707.1 mouse_genomes_project 3 16800802 16801853 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060523.1 MGP_WSBEiJ_G0026635.1 mouse_genomes_project 3 87754523 87756128 - MGP_WSBEiJ_P0060523 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060524.1 MGP_WSBEiJ_G0026635.1 mouse_genomes_project 3 87754531 87755634 - protein_coding retained_intron MGP_WSBEiJ_T0060525.1 MGP_WSBEiJ_G0026635.1 mouse_genomes_project 3 87754531 87755396 - protein_coding retained_intron MGP_WSBEiJ_T0061618.1 MGP_WSBEiJ_G0026896.1 mouse_genomes_project 3 98995366 99056058 - MGP_WSBEiJ_P0061618 protein_coding protein_coding MGP_WSBEiJ_T0061619.1 MGP_WSBEiJ_G0026896.1 mouse_genomes_project 3 98995366 99056058 - MGP_WSBEiJ_P0061619 protein_coding protein_coding MGP_WSBEiJ_T0061620.1 MGP_WSBEiJ_G0026896.1 mouse_genomes_project 3 98995366 99056056 - MGP_WSBEiJ_P0061620 protein_coding protein_coding MGP_WSBEiJ_T0061623.1 MGP_WSBEiJ_G0026896.1 mouse_genomes_project 3 98996275 99068681 - MGP_WSBEiJ_P0061623 protein_coding protein_coding MGP_WSBEiJ_T0061625.1 MGP_WSBEiJ_G0026896.1 mouse_genomes_project 3 99063947 99068630 - protein_coding processed_transcript MGP_WSBEiJ_T0013902.1 MGP_WSBEiJ_G0012032.1 mouse_genomes_project 3 125032425 125034221 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100271.1 MGP_WSBEiJ_G0038791.1 mouse_genomes_project 3 57051376 57055035 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100272.1 MGP_WSBEiJ_G0038791.1 mouse_genomes_project 3 57053111 57076524 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0007599.1 MGP_WSBEiJ_G0006219.1 mouse_genomes_project 3 136336894 136517471 - lincRNA lincRNA MGP_WSBEiJ_T0063128.1 MGP_WSBEiJ_G0027208.1 mouse_genomes_project 3 149060860 149076315 - MGP_WSBEiJ_P0063128 Rpf1 protein_coding protein_coding MGP_WSBEiJ_T0063129.1 MGP_WSBEiJ_G0027208.1 mouse_genomes_project 3 149061248 149063129 - MGP_WSBEiJ_P0063129 Rpf1 protein_coding protein_coding MGP_WSBEiJ_T0063130.1 MGP_WSBEiJ_G0027208.1 mouse_genomes_project 3 149061327 149063397 - Rpf1 protein_coding retained_intron MGP_WSBEiJ_T0063131.1 MGP_WSBEiJ_G0027208.1 mouse_genomes_project 3 149063077 149075964 - Rpf1 protein_coding processed_transcript MGP_WSBEiJ_T0063132.1 MGP_WSBEiJ_G0027208.1 mouse_genomes_project 3 149065701 149076297 - MGP_WSBEiJ_P0063132 Rpf1 protein_coding protein_coding MGP_WSBEiJ_T0001100.1 MGP_WSBEiJ_G0001032.1 mouse_genomes_project 3 28367627 28367937 - TEC TEC MGP_WSBEiJ_T0001123.1 MGP_WSBEiJ_G0001055.1 mouse_genomes_project 3 35385350 35388480 + TEC TEC MGP_WSBEiJ_T0013591.1 MGP_WSBEiJ_G0011721.1 mouse_genomes_project 3 22131941 22132224 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017368.1 MGP_WSBEiJ_G0014928.1 mouse_genomes_project 3 81018277 81025262 - Gm9989 processed_transcript lincRNA MGP_WSBEiJ_T0017369.1 MGP_WSBEiJ_G0014928.1 mouse_genomes_project 3 81022131 81025327 - Gm9989 processed_transcript retained_intron MGP_WSBEiJ_T0098163.1 MGP_WSBEiJ_G0036826.1 mouse_genomes_project 3 57235967 57236069 + Gm22491 snRNA snRNA MGP_WSBEiJ_T0100784.1 MGP_WSBEiJ_G0039242.1 mouse_genomes_project 3 94080958 94081148 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004294.1 MGP_WSBEiJ_G0003751.1 mouse_genomes_project 3 131489597 131501923 + Gm42697 antisense antisense MGP_WSBEiJ_T0007503.1 MGP_WSBEiJ_G0006140.1 mouse_genomes_project 3 94213428 94216953 - 1700040D17Rik lincRNA lincRNA MGP_WSBEiJ_T0007610.1 MGP_WSBEiJ_G0006230.1 mouse_genomes_project 3 142922598 142922975 - lincRNA lincRNA MGP_WSBEiJ_T0013610.1 MGP_WSBEiJ_G0011740.1 mouse_genomes_project 3 33101506 33104335 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013765.1 MGP_WSBEiJ_G0011895.1 mouse_genomes_project 3 80514736 80515016 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001104.1 MGP_WSBEiJ_G0001036.1 mouse_genomes_project 3 30196741 30197054 - TEC TEC MGP_WSBEiJ_T0013534.1 MGP_WSBEiJ_G0011664.1 mouse_genomes_project 3 5477955 5478268 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013527.1 MGP_WSBEiJ_G0011657.1 mouse_genomes_project 3 4188721 4188841 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063268.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155250327 155315429 + MGP_WSBEiJ_P0063268 Zzz3 protein_coding protein_coding MGP_WSBEiJ_T0063269.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155250379 155283488 + Zzz3 protein_coding retained_intron MGP_WSBEiJ_T0063270.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155250857 155318779 + MGP_WSBEiJ_P0063270 Zzz3 protein_coding protein_coding MGP_WSBEiJ_T0063271.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155250886 155304657 + Zzz3 protein_coding processed_transcript MGP_WSBEiJ_T0063272.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155250933 155304355 + Zzz3 protein_coding processed_transcript MGP_WSBEiJ_T0063273.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155250985 155315507 + MGP_WSBEiJ_P0063273 Zzz3 protein_coding protein_coding MGP_WSBEiJ_T0063274.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155251538 155315432 + MGP_WSBEiJ_P0063274 Zzz3 protein_coding protein_coding MGP_WSBEiJ_T0063275.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155251548 155318779 + MGP_WSBEiJ_P0063275 Zzz3 protein_coding protein_coding MGP_WSBEiJ_T0063276.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155291532 155294722 + Zzz3 protein_coding retained_intron MGP_WSBEiJ_T0063277.1 MGP_WSBEiJ_G0027226.1 mouse_genomes_project 3 155313632 155315034 + Zzz3 protein_coding processed_transcript MGP_WSBEiJ_T0001257.1 MGP_WSBEiJ_G0001187.1 mouse_genomes_project 3 112734166 112736241 + TEC TEC MGP_WSBEiJ_T0063044.1 MGP_WSBEiJ_G0027189.1 mouse_genomes_project 3 147218310 147251005 - MGP_WSBEiJ_P0063044 Clca3b protein_coding protein_coding MGP_WSBEiJ_T0060255.1 MGP_WSBEiJ_G0026576.1 mouse_genomes_project 3 82184953 82203580 + MGP_WSBEiJ_P0060255 Plrg1 protein_coding protein_coding MGP_WSBEiJ_T0060256.1 MGP_WSBEiJ_G0026576.1 mouse_genomes_project 3 82184963 82203514 + MGP_WSBEiJ_P0060256 Plrg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060257.1 MGP_WSBEiJ_G0026576.1 mouse_genomes_project 3 82184986 82203397 + MGP_WSBEiJ_P0060257 Plrg1 protein_coding protein_coding MGP_WSBEiJ_T0060258.1 MGP_WSBEiJ_G0026576.1 mouse_genomes_project 3 82199265 82200287 + Plrg1 protein_coding retained_intron MGP_WSBEiJ_T0060259.1 MGP_WSBEiJ_G0026576.1 mouse_genomes_project 3 82200194 82201386 + Plrg1 protein_coding retained_intron MGP_WSBEiJ_T0013822.1 MGP_WSBEiJ_G0011952.1 mouse_genomes_project 3 99498978 99499507 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013660.1 MGP_WSBEiJ_G0011790.1 mouse_genomes_project 3 47620425 47620667 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058912.1 MGP_WSBEiJ_G0026288.1 mouse_genomes_project 3 1982076 2186915 + MGP_WSBEiJ_P0058912 Zfhx4 protein_coding protein_coding MGP_WSBEiJ_T0058913.1 MGP_WSBEiJ_G0026288.1 mouse_genomes_project 3 1982096 2101861 + Zfhx4 protein_coding retained_intron MGP_WSBEiJ_T0058914.1 MGP_WSBEiJ_G0026288.1 mouse_genomes_project 3 1982104 2189603 + MGP_WSBEiJ_P0058914 Zfhx4 protein_coding protein_coding MGP_WSBEiJ_T0058915.1 MGP_WSBEiJ_G0026288.1 mouse_genomes_project 3 1985767 2009890 + MGP_WSBEiJ_P0058915 Zfhx4 protein_coding protein_coding MGP_WSBEiJ_T0058916.1 MGP_WSBEiJ_G0026288.1 mouse_genomes_project 3 2009543 2189605 + MGP_WSBEiJ_P0058916 Zfhx4 protein_coding protein_coding MGP_WSBEiJ_T0098206.1 MGP_WSBEiJ_G0036869.1 mouse_genomes_project 3 109290372 109290495 + Gm23336 snRNA snRNA MGP_WSBEiJ_T0001274.1 MGP_WSBEiJ_G0001204.1 mouse_genomes_project 3 123442015 123445219 + TEC TEC MGP_WSBEiJ_T0013772.1 MGP_WSBEiJ_G0011902.1 mouse_genomes_project 3 85179969 85180444 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059981.1 MGP_WSBEiJ_G0026508.1 mouse_genomes_project 3 62509224 62784300 - MGP_WSBEiJ_P0059981 Vmn2r3 protein_coding protein_coding MGP_WSBEiJ_T0063045.1 MGP_WSBEiJ_G0027190.1 mouse_genomes_project 3 147454425 147484104 - MGP_WSBEiJ_P0063045 Clca1 protein_coding protein_coding MGP_WSBEiJ_T0063046.1 MGP_WSBEiJ_G0027190.1 mouse_genomes_project 3 147455172 147459784 - Clca1 protein_coding processed_transcript MGP_WSBEiJ_T0063047.1 MGP_WSBEiJ_G0027190.1 mouse_genomes_project 3 147464701 147470358 - Clca1 protein_coding processed_transcript MGP_WSBEiJ_T0097355.1 MGP_WSBEiJ_G0036029.1 mouse_genomes_project 3 104401078 104402361 + Gm15472 sense_intronic sense_intronic MGP_WSBEiJ_T0061048.1 MGP_WSBEiJ_G0026747.1 mouse_genomes_project 3 92318962 92321687 - MGP_WSBEiJ_P0061048 Ivl protein_coding protein_coding MGP_WSBEiJ_T0007596.1 MGP_WSBEiJ_G0006217.1 mouse_genomes_project 3 136055650 136066936 + Gm43194 lincRNA lincRNA MGP_WSBEiJ_T0007597.1 MGP_WSBEiJ_G0006217.1 mouse_genomes_project 3 136055788 136068428 + Gm43194 lincRNA lincRNA MGP_WSBEiJ_T0013874.1 MGP_WSBEiJ_G0012004.1 mouse_genomes_project 3 114754373 114754631 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063195.1 MGP_WSBEiJ_G0027219.1 mouse_genomes_project 3 154618767 154660548 - MGP_WSBEiJ_P0063195 Ptgfr protein_coding protein_coding MGP_WSBEiJ_T0063196.1 MGP_WSBEiJ_G0027219.1 mouse_genomes_project 3 154623579 154658943 - MGP_WSBEiJ_P0063196 Ptgfr protein_coding protein_coding MGP_WSBEiJ_T0063197.1 MGP_WSBEiJ_G0027219.1 mouse_genomes_project 3 154623955 154657075 - Ptgfr protein_coding processed_transcript MGP_WSBEiJ_T0001232.1 MGP_WSBEiJ_G0001162.1 mouse_genomes_project 3 95544454 95546059 + TEC TEC MGP_WSBEiJ_T0100793.1 MGP_WSBEiJ_G0039251.1 mouse_genomes_project 3 98961684 98973334 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013546.1 MGP_WSBEiJ_G0011676.1 mouse_genomes_project 3 7983218 7983395 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013608.1 MGP_WSBEiJ_G0011738.1 mouse_genomes_project 3 31576272 31580007 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098161.1 MGP_WSBEiJ_G0036824.1 mouse_genomes_project 3 56134185 56134285 - Gm24531 snRNA snRNA MGP_WSBEiJ_T0001242.1 MGP_WSBEiJ_G0001172.1 mouse_genomes_project 3 97750720 97754610 + TEC TEC MGP_WSBEiJ_T0001332.1 MGP_WSBEiJ_G0001261.1 mouse_genomes_project 3 139919714 139922054 + TEC TEC MGP_WSBEiJ_T0062108.1 MGP_WSBEiJ_G0027012.1 mouse_genomes_project 3 109151595 109168241 + MGP_WSBEiJ_P0062108 Mybphl protein_coding protein_coding MGP_WSBEiJ_T0060774.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88825696 88837163 - MGP_WSBEiJ_P0060774 Adam15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060775.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88826791 88837068 - MGP_WSBEiJ_P0060775 Adam15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060776.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88826794 88837170 - MGP_WSBEiJ_P0060776 Adam15 protein_coding protein_coding MGP_WSBEiJ_T0060777.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88826794 88837177 - MGP_WSBEiJ_P0060777 Adam15 protein_coding protein_coding MGP_WSBEiJ_T0060778.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88826795 88828312 - Adam15 protein_coding processed_transcript MGP_WSBEiJ_T0060779.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88826798 88827595 - Adam15 protein_coding processed_transcript MGP_WSBEiJ_T0060780.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88826798 88837140 - MGP_WSBEiJ_P0060780 Adam15 protein_coding protein_coding MGP_WSBEiJ_T0060781.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88826802 88837156 - MGP_WSBEiJ_P0060781 Adam15 protein_coding protein_coding MGP_WSBEiJ_T0060782.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88826899 88827507 - Adam15 protein_coding retained_intron MGP_WSBEiJ_T0060783.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88827069 88828074 - Adam15 protein_coding retained_intron MGP_WSBEiJ_T0060784.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88827228 88830834 - Adam15 protein_coding retained_intron MGP_WSBEiJ_T0060785.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88829886 88837155 - Adam15 protein_coding retained_intron MGP_WSBEiJ_T0060786.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88833708 88837141 - Adam15 protein_coding retained_intron MGP_WSBEiJ_T0060787.1 MGP_WSBEiJ_G0026675.1 mouse_genomes_project 3 88835698 88836288 - Adam15 protein_coding processed_transcript MGP_WSBEiJ_T0099484.1 MGP_WSBEiJ_G0038147.1 mouse_genomes_project 3 156607717 156607833 + Gm22206 snoRNA snoRNA MGP_WSBEiJ_T0007547.1 MGP_WSBEiJ_G0006178.1 mouse_genomes_project 3 109902385 109904212 - 4930408K08Rik lincRNA lincRNA MGP_WSBEiJ_T0013516.1 MGP_WSBEiJ_G0011646.1 mouse_genomes_project 3 567234 568008 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007386.1 MGP_WSBEiJ_G0006056.1 mouse_genomes_project 3 32811105 32835811 - Gm43003 lincRNA lincRNA MGP_WSBEiJ_T0011344.1 MGP_WSBEiJ_G0009501.1 mouse_genomes_project 3 82780986 82781284 - Gm22342 misc_RNA misc_RNA MGP_WSBEiJ_T0100757.1 MGP_WSBEiJ_G0039215.1 mouse_genomes_project 3 57761967 57762232 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004169.1 MGP_WSBEiJ_G0003669.1 mouse_genomes_project 3 57623193 57629761 + Gm38186 antisense antisense MGP_WSBEiJ_T0001235.1 MGP_WSBEiJ_G0001165.1 mouse_genomes_project 3 96262497 96264111 + TEC TEC MGP_WSBEiJ_T0013680.1 MGP_WSBEiJ_G0011810.1 mouse_genomes_project 3 52142257 52142665 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059677.1 MGP_WSBEiJ_G0026440.1 mouse_genomes_project 3 49495073 49507431 + Rab33b protein_coding processed_transcript MGP_WSBEiJ_T0059678.1 MGP_WSBEiJ_G0026440.1 mouse_genomes_project 3 49495083 49495678 + MGP_WSBEiJ_P0059678 Rab33b protein_coding protein_coding MGP_WSBEiJ_T0059679.1 MGP_WSBEiJ_G0026440.1 mouse_genomes_project 3 49495117 49512094 + MGP_WSBEiJ_P0059679 Rab33b protein_coding protein_coding MGP_WSBEiJ_T0097380.1 MGP_WSBEiJ_G0036054.1 mouse_genomes_project 3 106655588 106657111 - Gm42721 sense_intronic sense_intronic MGP_WSBEiJ_T0097367.1 MGP_WSBEiJ_G0036041.1 mouse_genomes_project 3 105053430 105059497 - Gm43696 sense_intronic sense_intronic MGP_WSBEiJ_T0013748.1 MGP_WSBEiJ_G0011878.1 mouse_genomes_project 3 74282331 74283633 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100777.1 MGP_WSBEiJ_G0039235.1 mouse_genomes_project 3 89506008 89509186 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0062475.1 MGP_WSBEiJ_G0027084.1 mouse_genomes_project 3 124769414 124877650 + MGP_WSBEiJ_P0062475 Sec24d protein_coding protein_coding MGP_WSBEiJ_T0062476.1 MGP_WSBEiJ_G0027084.1 mouse_genomes_project 3 124769438 124782188 + Sec24d protein_coding retained_intron MGP_WSBEiJ_T0062477.1 MGP_WSBEiJ_G0027084.1 mouse_genomes_project 3 124769449 124776430 + MGP_WSBEiJ_P0062477 Sec24d protein_coding protein_coding MGP_WSBEiJ_T0062478.1 MGP_WSBEiJ_G0027084.1 mouse_genomes_project 3 124795036 124877645 + Sec24d protein_coding retained_intron MGP_WSBEiJ_T0062479.1 MGP_WSBEiJ_G0027084.1 mouse_genomes_project 3 124843377 124845317 + Sec24d protein_coding retained_intron MGP_WSBEiJ_T0062480.1 MGP_WSBEiJ_G0027084.1 mouse_genomes_project 3 124845821 124862023 + Sec24d protein_coding processed_transcript MGP_WSBEiJ_T0062481.1 MGP_WSBEiJ_G0027084.1 mouse_genomes_project 3 124866899 124867957 + Sec24d protein_coding retained_intron MGP_WSBEiJ_T0062482.1 MGP_WSBEiJ_G0027084.1 mouse_genomes_project 3 124876723 124877645 + Sec24d protein_coding retained_intron MGP_WSBEiJ_T0001251.1 MGP_WSBEiJ_G0001181.1 mouse_genomes_project 3 108633268 108635151 + TEC TEC MGP_WSBEiJ_T0062964.1 MGP_WSBEiJ_G0027173.1 mouse_genomes_project 3 144036729 144083822 - MGP_WSBEiJ_P0062964 Bmpr1b protein_coding protein_coding MGP_WSBEiJ_T0062965.1 MGP_WSBEiJ_G0027173.1 mouse_genomes_project 3 144038973 144138037 - MGP_WSBEiJ_P0062965 Bmpr1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062154.1 MGP_WSBEiJ_G0027021.1 mouse_genomes_project 3 109456042 109482078 + MGP_WSBEiJ_P0062154 Clcc1 protein_coding protein_coding MGP_WSBEiJ_T0062155.1 MGP_WSBEiJ_G0027021.1 mouse_genomes_project 3 109456078 109466296 + Clcc1 protein_coding processed_transcript MGP_WSBEiJ_T0062156.1 MGP_WSBEiJ_G0027021.1 mouse_genomes_project 3 109456086 109471414 + Clcc1 protein_coding processed_transcript MGP_WSBEiJ_T0062157.1 MGP_WSBEiJ_G0027021.1 mouse_genomes_project 3 109456087 109482074 + MGP_WSBEiJ_P0062157 Clcc1 protein_coding protein_coding MGP_WSBEiJ_T0062158.1 MGP_WSBEiJ_G0027021.1 mouse_genomes_project 3 109456087 109466845 + MGP_WSBEiJ_P0062158 Clcc1 protein_coding protein_coding MGP_WSBEiJ_T0062159.1 MGP_WSBEiJ_G0027021.1 mouse_genomes_project 3 109456119 109481250 + MGP_WSBEiJ_P0062159 Clcc1 protein_coding protein_coding MGP_WSBEiJ_T0062160.1 MGP_WSBEiJ_G0027021.1 mouse_genomes_project 3 109466488 109472150 + Clcc1 protein_coding processed_transcript MGP_WSBEiJ_T0062161.1 MGP_WSBEiJ_G0027021.1 mouse_genomes_project 3 109471187 109472156 + Clcc1 protein_coding retained_intron MGP_WSBEiJ_T0013550.1 MGP_WSBEiJ_G0011680.1 mouse_genomes_project 3 9820339 9821294 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061047.1 MGP_WSBEiJ_G0026746.1 mouse_genomes_project 3 92285383 92287412 - MGP_WSBEiJ_P0061047 2310046K23Rik protein_coding protein_coding MGP_WSBEiJ_T0062162.1 MGP_WSBEiJ_G0027022.1 mouse_genomes_project 3 109481875 109527616 - MGP_WSBEiJ_P0062162 Gpsm2 protein_coding protein_coding MGP_WSBEiJ_T0062163.1 MGP_WSBEiJ_G0027022.1 mouse_genomes_project 3 109506405 109507495 - Gpsm2 protein_coding retained_intron MGP_WSBEiJ_T0062164.1 MGP_WSBEiJ_G0027022.1 mouse_genomes_project 3 109506821 109516973 - MGP_WSBEiJ_P0062164 Gpsm2 protein_coding protein_coding MGP_WSBEiJ_T0062165.1 MGP_WSBEiJ_G0027022.1 mouse_genomes_project 3 109507957 109527423 - Gpsm2 protein_coding processed_transcript MGP_WSBEiJ_T0011339.1 MGP_WSBEiJ_G0009496.1 mouse_genomes_project 3 57264464 57264540 + Gm27793 misc_RNA misc_RNA MGP_WSBEiJ_T0099487.1 MGP_WSBEiJ_G0038150.1 mouse_genomes_project 3 156827922 156827993 - Snord45b snoRNA snoRNA MGP_WSBEiJ_T0001203.1 MGP_WSBEiJ_G0001133.1 mouse_genomes_project 3 64558820 64560822 + TEC TEC MGP_WSBEiJ_T0059604.1 MGP_WSBEiJ_G0026429.1 mouse_genomes_project 3 39290788 39417779 - MGP_WSBEiJ_P0059604 Sclt1 protein_coding protein_coding MGP_WSBEiJ_T0059605.1 MGP_WSBEiJ_G0026429.1 mouse_genomes_project 3 39291010 39417746 - MGP_WSBEiJ_P0059605 Sclt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059606.1 MGP_WSBEiJ_G0026429.1 mouse_genomes_project 3 39291010 39417293 - MGP_WSBEiJ_P0059606 Sclt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059607.1 MGP_WSBEiJ_G0026429.1 mouse_genomes_project 3 39291174 39294180 - Sclt1 protein_coding retained_intron MGP_WSBEiJ_T0059608.1 MGP_WSBEiJ_G0026429.1 mouse_genomes_project 3 39293456 39344609 - Sclt1 protein_coding retained_intron MGP_WSBEiJ_T0059609.1 MGP_WSBEiJ_G0026429.1 mouse_genomes_project 3 39328705 39335485 - MGP_WSBEiJ_P0059609 Sclt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059610.1 MGP_WSBEiJ_G0026429.1 mouse_genomes_project 3 39345117 39391931 - Sclt1 protein_coding retained_intron MGP_WSBEiJ_T0059611.1 MGP_WSBEiJ_G0026429.1 mouse_genomes_project 3 39416783 39417670 - Sclt1 protein_coding retained_intron MGP_WSBEiJ_T0062257.1 MGP_WSBEiJ_G0027042.1 mouse_genomes_project 3 117052745 117056782 - Slc30a7 protein_coding processed_transcript MGP_WSBEiJ_T0062258.1 MGP_WSBEiJ_G0027042.1 mouse_genomes_project 3 117052745 117124363 - MGP_WSBEiJ_P0062258 Slc30a7 protein_coding protein_coding MGP_WSBEiJ_T0062259.1 MGP_WSBEiJ_G0027042.1 mouse_genomes_project 3 117100360 117108098 - Slc30a7 protein_coding processed_transcript MGP_WSBEiJ_T0062260.1 MGP_WSBEiJ_G0027042.1 mouse_genomes_project 3 117107100 117109310 - Slc30a7 protein_coding retained_intron MGP_WSBEiJ_T0062048.1 MGP_WSBEiJ_G0026996.1 mouse_genomes_project 3 108677863 108683343 - MGP_WSBEiJ_P0062048 Gstm7 protein_coding protein_coding MGP_WSBEiJ_T0062049.1 MGP_WSBEiJ_G0026996.1 mouse_genomes_project 3 108678236 108683193 - MGP_WSBEiJ_P0062049 Gstm7 protein_coding protein_coding MGP_WSBEiJ_T0062050.1 MGP_WSBEiJ_G0026996.1 mouse_genomes_project 3 108678339 108683140 - MGP_WSBEiJ_P0062050 Gstm7 protein_coding protein_coding MGP_WSBEiJ_T0062051.1 MGP_WSBEiJ_G0026996.1 mouse_genomes_project 3 108680592 108683105 - MGP_WSBEiJ_P0062051 Gstm7 protein_coding protein_coding MGP_WSBEiJ_T0062052.1 MGP_WSBEiJ_G0026996.1 mouse_genomes_project 3 108680661 108683136 - MGP_WSBEiJ_P0062052 Gstm7 protein_coding protein_coding MGP_WSBEiJ_T0007366.1 MGP_WSBEiJ_G0006038.1 mouse_genomes_project 3 19390268 19402893 - Gm38324 lincRNA lincRNA MGP_WSBEiJ_T0017424.1 MGP_WSBEiJ_G0014948.1 mouse_genomes_project 3 137746153 137756383 - 4933401H06Rik processed_transcript macro_lncRNA MGP_WSBEiJ_T0017425.1 MGP_WSBEiJ_G0014948.1 mouse_genomes_project 3 137746255 137756383 - 4933401H06Rik processed_transcript antisense MGP_WSBEiJ_T0007525.1 MGP_WSBEiJ_G0006161.1 mouse_genomes_project 3 102736335 102912115 + A230001M10Rik lincRNA lincRNA MGP_WSBEiJ_T0007526.1 MGP_WSBEiJ_G0006161.1 mouse_genomes_project 3 102736452 102762679 + A230001M10Rik lincRNA lincRNA MGP_WSBEiJ_T0007527.1 MGP_WSBEiJ_G0006161.1 mouse_genomes_project 3 102736769 102761884 + A230001M10Rik lincRNA lincRNA MGP_WSBEiJ_T0060327.1 MGP_WSBEiJ_G0026592.1 mouse_genomes_project 3 85130962 85150562 - MGP_WSBEiJ_P0060327 Glt28d2 protein_coding protein_coding MGP_WSBEiJ_T0062483.1 MGP_WSBEiJ_G0027085.1 mouse_genomes_project 3 124881192 124903541 - MGP_WSBEiJ_P0062483 Mettl14 protein_coding protein_coding MGP_WSBEiJ_T0062484.1 MGP_WSBEiJ_G0027085.1 mouse_genomes_project 3 124881192 124903364 - MGP_WSBEiJ_P0062484 Mettl14 protein_coding protein_coding MGP_WSBEiJ_T0062485.1 MGP_WSBEiJ_G0027085.1 mouse_genomes_project 3 124881192 124903418 - MGP_WSBEiJ_P0062485 Mettl14 protein_coding protein_coding MGP_WSBEiJ_T0062486.1 MGP_WSBEiJ_G0027085.1 mouse_genomes_project 3 124882369 124889663 - MGP_WSBEiJ_P0062486 Mettl14 protein_coding protein_coding MGP_WSBEiJ_T0062487.1 MGP_WSBEiJ_G0027085.1 mouse_genomes_project 3 124903149 124903531 - Mettl14 protein_coding retained_intron MGP_WSBEiJ_T0007368.1 MGP_WSBEiJ_G0006040.1 mouse_genomes_project 3 20511174 20569394 + 4930412E21Rik lincRNA lincRNA MGP_WSBEiJ_T0061286.1 MGP_WSBEiJ_G0026814.1 mouse_genomes_project 3 95171287 95181318 - MGP_WSBEiJ_P0061286 Bnipl protein_coding protein_coding MGP_WSBEiJ_T0061287.1 MGP_WSBEiJ_G0026814.1 mouse_genomes_project 3 95171311 95181174 - MGP_WSBEiJ_P0061287 Bnipl protein_coding protein_coding MGP_WSBEiJ_T0061288.1 MGP_WSBEiJ_G0026814.1 mouse_genomes_project 3 95171841 95181261 - MGP_WSBEiJ_P0061288 Bnipl protein_coding protein_coding MGP_WSBEiJ_T0061289.1 MGP_WSBEiJ_G0026814.1 mouse_genomes_project 3 95173114 95181273 - MGP_WSBEiJ_P0061289 Bnipl protein_coding protein_coding MGP_WSBEiJ_T0061290.1 MGP_WSBEiJ_G0026814.1 mouse_genomes_project 3 95175269 95178704 - Bnipl protein_coding retained_intron MGP_WSBEiJ_T0013793.1 MGP_WSBEiJ_G0011923.1 mouse_genomes_project 3 92420863 92421490 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017412.1 MGP_WSBEiJ_G0014945.1 mouse_genomes_project 3 124231480 124276628 - 4930447N08Rik processed_transcript antisense MGP_WSBEiJ_T0017413.1 MGP_WSBEiJ_G0014945.1 mouse_genomes_project 3 124239043 124276727 - 4930447N08Rik processed_transcript retained_intron MGP_WSBEiJ_T0017414.1 MGP_WSBEiJ_G0014945.1 mouse_genomes_project 3 124268327 124276573 - 4930447N08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017415.1 MGP_WSBEiJ_G0014945.1 mouse_genomes_project 3 124268334 124276660 - 4930447N08Rik processed_transcript antisense MGP_WSBEiJ_T0063184.1 MGP_WSBEiJ_G0027216.1 mouse_genomes_project 3 154255704 154370285 + MGP_WSBEiJ_P0063184 Adgrl4 protein_coding protein_coding MGP_WSBEiJ_T0063185.1 MGP_WSBEiJ_G0027216.1 mouse_genomes_project 3 154255746 154322051 + MGP_WSBEiJ_P0063185 Adgrl4 protein_coding protein_coding MGP_WSBEiJ_T0063186.1 MGP_WSBEiJ_G0027216.1 mouse_genomes_project 3 154256091 154318645 + Adgrl4 protein_coding processed_transcript MGP_WSBEiJ_T0063187.1 MGP_WSBEiJ_G0027216.1 mouse_genomes_project 3 154256913 154322022 + Adgrl4 protein_coding retained_intron MGP_WSBEiJ_T0063188.1 MGP_WSBEiJ_G0027216.1 mouse_genomes_project 3 154321925 154330612 + Adgrl4 protein_coding processed_transcript MGP_WSBEiJ_T0063189.1 MGP_WSBEiJ_G0027216.1 mouse_genomes_project 3 154340549 154345254 + Adgrl4 protein_coding processed_transcript MGP_WSBEiJ_T0059575.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38593156 38623818 + MGP_WSBEiJ_P0059575 Larp1b protein_coding unknown_likely_coding MGP_WSBEiJ_T0059576.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38593366 38622248 + MGP_WSBEiJ_P0059576 Larp1b protein_coding protein_coding MGP_WSBEiJ_T0059577.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38593804 38621711 + MGP_WSBEiJ_P0059577 Larp1b protein_coding protein_coding MGP_WSBEiJ_T0059578.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38604639 38608118 + Larp1b protein_coding processed_transcript MGP_WSBEiJ_T0059579.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38605211 38621864 + MGP_WSBEiJ_P0059579 Larp1b protein_coding protein_coding MGP_WSBEiJ_T0059580.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38608063 38655852 + MGP_WSBEiJ_P0059580 Larp1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059581.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38615715 38621458 + Larp1b protein_coding processed_transcript MGP_WSBEiJ_T0059582.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38654562 38683581 + Larp1b protein_coding processed_transcript MGP_WSBEiJ_T0059583.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38665535 38683637 + Larp1b protein_coding retained_intron MGP_WSBEiJ_T0059584.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38667726 38683054 + Larp1b protein_coding processed_transcript MGP_WSBEiJ_T0059585.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38668404 38683535 + MGP_WSBEiJ_P0059585 Larp1b protein_coding protein_coding MGP_WSBEiJ_T0059586.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38676943 38677662 + Larp1b protein_coding processed_transcript MGP_WSBEiJ_T0059587.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38676962 38683601 + Larp1b protein_coding processed_transcript MGP_WSBEiJ_T0059588.1 MGP_WSBEiJ_G0026426.1 mouse_genomes_project 3 38680155 38682013 + Larp1b protein_coding processed_transcript MGP_WSBEiJ_T0061546.1 MGP_WSBEiJ_G0026874.1 mouse_genomes_project 3 97000247 97012571 - MGP_WSBEiJ_P0061546 Gja8 protein_coding protein_coding MGP_WSBEiJ_T0061773.1 MGP_WSBEiJ_G0026929.1 mouse_genomes_project 3 103666529 103674270 + MGP_WSBEiJ_P0061773 Bcas2 protein_coding protein_coding MGP_WSBEiJ_T0061774.1 MGP_WSBEiJ_G0026929.1 mouse_genomes_project 3 103666577 103673786 + Bcas2 protein_coding retained_intron MGP_WSBEiJ_T0061775.1 MGP_WSBEiJ_G0026929.1 mouse_genomes_project 3 103666623 103673788 + Bcas2 protein_coding retained_intron MGP_WSBEiJ_T0061776.1 MGP_WSBEiJ_G0026929.1 mouse_genomes_project 3 103666636 103673407 + MGP_WSBEiJ_P0061776 Bcas2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061777.1 MGP_WSBEiJ_G0026929.1 mouse_genomes_project 3 103666646 103674284 + MGP_WSBEiJ_P0061777 Bcas2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061778.1 MGP_WSBEiJ_G0026929.1 mouse_genomes_project 3 103666659 103669498 + Bcas2 protein_coding retained_intron MGP_WSBEiJ_T0097347.1 MGP_WSBEiJ_G0036021.1 mouse_genomes_project 3 102595762 102597042 + Gm43244 sense_intronic sense_intronic MGP_WSBEiJ_T0062592.1 MGP_WSBEiJ_G0027101.1 mouse_genomes_project 3 129450629 129465247 + MGP_WSBEiJ_P0062592 Tifa protein_coding protein_coding MGP_WSBEiJ_T0062593.1 MGP_WSBEiJ_G0027101.1 mouse_genomes_project 3 129450734 129499535 + Tifa protein_coding processed_transcript MGP_WSBEiJ_T0062594.1 MGP_WSBEiJ_G0027101.1 mouse_genomes_project 3 129450736 129464824 + MGP_WSBEiJ_P0062594 Tifa protein_coding protein_coding MGP_WSBEiJ_T0062595.1 MGP_WSBEiJ_G0027101.1 mouse_genomes_project 3 129455319 129464824 + MGP_WSBEiJ_P0062595 Tifa protein_coding protein_coding MGP_WSBEiJ_T0062596.1 MGP_WSBEiJ_G0027101.1 mouse_genomes_project 3 129455468 129465247 + MGP_WSBEiJ_P0062596 Tifa protein_coding protein_coding MGP_WSBEiJ_T0013525.1 MGP_WSBEiJ_G0011655.1 mouse_genomes_project 3 3373170 3373429 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061006.1 MGP_WSBEiJ_G0026717.1 mouse_genomes_project 3 90217918 90221949 + MGP_WSBEiJ_P0061006 Gm42674 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060371.1 MGP_WSBEiJ_G0026605.1 mouse_genomes_project 3 86760979 86798883 + MGP_WSBEiJ_P0060371 Fcrl5 protein_coding protein_coding MGP_WSBEiJ_T0060372.1 MGP_WSBEiJ_G0026605.1 mouse_genomes_project 3 86761019 86819544 + MGP_WSBEiJ_P0060372 Fcrl5 protein_coding protein_coding MGP_WSBEiJ_T0060373.1 MGP_WSBEiJ_G0026605.1 mouse_genomes_project 3 86761091 86787844 + MGP_WSBEiJ_P0060373 Fcrl5 protein_coding protein_coding MGP_WSBEiJ_T0060374.1 MGP_WSBEiJ_G0026605.1 mouse_genomes_project 3 86761091 86787844 + MGP_WSBEiJ_P0060374 Fcrl5 protein_coding protein_coding MGP_WSBEiJ_T0060375.1 MGP_WSBEiJ_G0026605.1 mouse_genomes_project 3 86761091 86787844 + MGP_WSBEiJ_P0060375 Fcrl5 protein_coding protein_coding MGP_WSBEiJ_T0060067.1 MGP_WSBEiJ_G0026530.1 mouse_genomes_project 3 67496822 67499172 - MGP_WSBEiJ_P0060067 Gm17641 protein_coding protein_coding MGP_WSBEiJ_T0062984.1 MGP_WSBEiJ_G0027176.1 mouse_genomes_project 3 144743329 144761153 + MGP_WSBEiJ_P0062984 Gbp7 protein_coding protein_coding MGP_WSBEiJ_T0062985.1 MGP_WSBEiJ_G0027176.1 mouse_genomes_project 3 144743329 144764251 + MGP_WSBEiJ_P0062985 Gbp7 protein_coding protein_coding MGP_WSBEiJ_T0013727.1 MGP_WSBEiJ_G0011857.1 mouse_genomes_project 3 66335420 66336786 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013879.1 MGP_WSBEiJ_G0012009.1 mouse_genomes_project 3 116619318 116620600 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007343.1 MGP_WSBEiJ_G0006024.1 mouse_genomes_project 3 10401521 10402905 - Gm2464 lincRNA lincRNA MGP_WSBEiJ_T0007420.1 MGP_WSBEiJ_G0006081.1 mouse_genomes_project 3 49375965 49384265 + Gm5103 lincRNA lincRNA MGP_WSBEiJ_T0007421.1 MGP_WSBEiJ_G0006081.1 mouse_genomes_project 3 49376017 49384272 + Gm5103 lincRNA lincRNA MGP_WSBEiJ_T0007396.1 MGP_WSBEiJ_G0006065.1 mouse_genomes_project 3 35776372 35804945 - Gm43821 lincRNA lincRNA MGP_WSBEiJ_T0007334.1 MGP_WSBEiJ_G0006018.1 mouse_genomes_project 3 5543262 5546593 - C230057A21Rik lincRNA lincRNA MGP_WSBEiJ_T0007335.1 MGP_WSBEiJ_G0006018.1 mouse_genomes_project 3 5543457 5546753 - C230057A21Rik lincRNA lincRNA MGP_WSBEiJ_T0007374.1 MGP_WSBEiJ_G0006046.1 mouse_genomes_project 3 31182502 31242876 - lincRNA lincRNA MGP_WSBEiJ_T0004122.1 MGP_WSBEiJ_G0003636.1 mouse_genomes_project 3 16311933 16324808 + Gm16093 antisense antisense MGP_WSBEiJ_T0062865.1 MGP_WSBEiJ_G0027151.1 mouse_genomes_project 3 139618510 139622284 + Ddit4l protein_coding processed_transcript MGP_WSBEiJ_T0062866.1 MGP_WSBEiJ_G0027151.1 mouse_genomes_project 3 139620561 139625565 + MGP_WSBEiJ_P0062866 Ddit4l protein_coding protein_coding MGP_WSBEiJ_T0062867.1 MGP_WSBEiJ_G0027151.1 mouse_genomes_project 3 139620926 139623059 + MGP_WSBEiJ_P0062867 Ddit4l protein_coding protein_coding MGP_WSBEiJ_T0062279.1 MGP_WSBEiJ_G0027047.1 mouse_genomes_project 3 117643129 117661843 - MGP_WSBEiJ_P0062279 Rtca protein_coding protein_coding MGP_WSBEiJ_T0062280.1 MGP_WSBEiJ_G0027047.1 mouse_genomes_project 3 117643406 117650198 - Rtca protein_coding retained_intron MGP_WSBEiJ_T0062281.1 MGP_WSBEiJ_G0027047.1 mouse_genomes_project 3 117648384 117661659 - MGP_WSBEiJ_P0062281 Rtca protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062282.1 MGP_WSBEiJ_G0027047.1 mouse_genomes_project 3 117649923 117661700 - MGP_WSBEiJ_P0062282 Rtca protein_coding protein_coding MGP_WSBEiJ_T0062283.1 MGP_WSBEiJ_G0027047.1 mouse_genomes_project 3 117653790 117661768 - MGP_WSBEiJ_P0062283 Rtca protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100084.1 MGP_WSBEiJ_G0038693.1 mouse_genomes_project 3 129114269 129115724 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013953.1 MGP_WSBEiJ_G0012083.1 mouse_genomes_project 3 142667242 142667784 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062068.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108841682 108853176 - Ampd2 protein_coding retained_intron MGP_WSBEiJ_T0062069.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108841682 108854248 - MGP_WSBEiJ_P0062069 Ampd2 protein_coding protein_coding MGP_WSBEiJ_T0062070.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108841684 108854272 - MGP_WSBEiJ_P0062070 Ampd2 protein_coding protein_coding MGP_WSBEiJ_T0062071.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108841707 108853020 - MGP_WSBEiJ_P0062071 Ampd2 protein_coding protein_coding MGP_WSBEiJ_T0062072.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108842364 108843091 - Ampd2 protein_coding retained_intron MGP_WSBEiJ_T0062073.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108842984 108844053 - Ampd2 protein_coding retained_intron MGP_WSBEiJ_T0062074.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108844233 108845516 - Ampd2 protein_coding retained_intron MGP_WSBEiJ_T0062075.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108846088 108847330 - Ampd2 protein_coding retained_intron MGP_WSBEiJ_T0062076.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108846252 108848239 - Ampd2 protein_coding retained_intron MGP_WSBEiJ_T0062077.1 MGP_WSBEiJ_G0027002.1 mouse_genomes_project 3 108847542 108853016 - Ampd2 protein_coding retained_intron MGP_WSBEiJ_T0011352.1 MGP_WSBEiJ_G0009509.1 mouse_genomes_project 3 127718280 127718548 - Gm26275 misc_RNA misc_RNA MGP_WSBEiJ_T0060611.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88082451 88113665 + MGP_WSBEiJ_P0060611 2810403A07Rik protein_coding protein_coding MGP_WSBEiJ_T0060612.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88082462 88084711 + 2810403A07Rik protein_coding retained_intron MGP_WSBEiJ_T0060613.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88082475 88113595 + MGP_WSBEiJ_P0060613 2810403A07Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060614.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88082475 88113303 + MGP_WSBEiJ_P0060614 2810403A07Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060615.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88082481 88102275 + 2810403A07Rik protein_coding retained_intron MGP_WSBEiJ_T0060616.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88082485 88112744 + MGP_WSBEiJ_P0060616 2810403A07Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060617.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88092887 88109649 + 2810403A07Rik protein_coding processed_transcript MGP_WSBEiJ_T0060618.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88099500 88101578 + 2810403A07Rik protein_coding retained_intron MGP_WSBEiJ_T0060619.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88100301 88109728 + 2810403A07Rik protein_coding retained_intron MGP_WSBEiJ_T0060620.1 MGP_WSBEiJ_G0026649.1 mouse_genomes_project 3 88109520 88111825 + 2810403A07Rik protein_coding processed_transcript MGP_WSBEiJ_T0013615.1 MGP_WSBEiJ_G0011745.1 mouse_genomes_project 3 34019147 34019646 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013530.1 MGP_WSBEiJ_G0011660.1 mouse_genomes_project 3 4681550 4682135 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013921.1 MGP_WSBEiJ_G0012051.1 mouse_genomes_project 3 134494065 134494453 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100078.1 MGP_WSBEiJ_G0038689.1 mouse_genomes_project 3 94225680 94226454 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100079.1 MGP_WSBEiJ_G0038689.1 mouse_genomes_project 3 94225871 94226288 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0013845.1 MGP_WSBEiJ_G0011975.1 mouse_genomes_project 3 104995550 104996265 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058973.1 MGP_WSBEiJ_G0026307.1 mouse_genomes_project 3 7239130 7258654 - MGP_WSBEiJ_P0058973 Impa1 protein_coding protein_coding MGP_WSBEiJ_T0058974.1 MGP_WSBEiJ_G0026307.1 mouse_genomes_project 3 7241129 7258654 - MGP_WSBEiJ_P0058974 Impa1 protein_coding protein_coding MGP_WSBEiJ_T0058975.1 MGP_WSBEiJ_G0026307.1 mouse_genomes_project 3 7242292 7243830 - Impa1 protein_coding retained_intron MGP_WSBEiJ_T0058976.1 MGP_WSBEiJ_G0026307.1 mouse_genomes_project 3 7242360 7258813 - MGP_WSBEiJ_P0058976 Impa1 protein_coding protein_coding MGP_WSBEiJ_T0058978.1 MGP_WSBEiJ_G0026307.1 mouse_genomes_project 3 7253321 7258346 - MGP_WSBEiJ_P0058978 Impa1 protein_coding protein_coding MGP_WSBEiJ_T0007399.1 MGP_WSBEiJ_G0006068.1 mouse_genomes_project 3 36117426 36133391 - Gm43536 lincRNA lincRNA MGP_WSBEiJ_T0007400.1 MGP_WSBEiJ_G0006068.1 mouse_genomes_project 3 36119081 36133631 - Gm43536 lincRNA lincRNA MGP_WSBEiJ_T0013645.1 MGP_WSBEiJ_G0011775.1 mouse_genomes_project 3 43105597 43105847 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011616.1 MGP_WSBEiJ_G0009763.1 mouse_genomes_project 3 92122205 92123519 + MGP_WSBEiJ_P0011616 Sprr2g polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0059166.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540563 25960104 + MGP_WSBEiJ_P0059166 Tnik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059167.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540564 25965378 + MGP_WSBEiJ_P0059167 Tnik protein_coding protein_coding MGP_WSBEiJ_T0059168.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540625 25641276 + Tnik protein_coding retained_intron MGP_WSBEiJ_T0059169.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540625 25784452 + Tnik protein_coding retained_intron MGP_WSBEiJ_T0059170.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540912 25955972 + Tnik protein_coding retained_intron MGP_WSBEiJ_T0059171.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540912 25957742 + MGP_WSBEiJ_P0059171 Tnik protein_coding protein_coding MGP_WSBEiJ_T0059172.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540912 25957742 + MGP_WSBEiJ_P0059172 Tnik protein_coding protein_coding MGP_WSBEiJ_T0059173.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540931 25542246 + Tnik protein_coding retained_intron MGP_WSBEiJ_T0059174.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540992 25957501 + MGP_WSBEiJ_P0059174 Tnik protein_coding protein_coding MGP_WSBEiJ_T0059175.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540992 25957501 + MGP_WSBEiJ_P0059175 Tnik protein_coding protein_coding MGP_WSBEiJ_T0059176.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540992 25957501 + MGP_WSBEiJ_P0059176 Tnik protein_coding protein_coding MGP_WSBEiJ_T0059177.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540992 25957501 + MGP_WSBEiJ_P0059177 Tnik protein_coding protein_coding MGP_WSBEiJ_T0059178.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25540992 25957501 + MGP_WSBEiJ_P0059178 Tnik protein_coding protein_coding MGP_WSBEiJ_T0059179.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25692041 25881901 + Tnik protein_coding processed_transcript MGP_WSBEiJ_T0059180.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25820903 25822716 + Tnik protein_coding retained_intron MGP_WSBEiJ_T0059181.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25916663 25925195 + Tnik protein_coding retained_intron MGP_WSBEiJ_T0059182.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25939167 25955468 + Tnik protein_coding retained_intron MGP_WSBEiJ_T0059183.1 MGP_WSBEiJ_G0026357.1 mouse_genomes_project 3 25956364 25958268 + Tnik protein_coding retained_intron MGP_WSBEiJ_T0100807.1 MGP_WSBEiJ_G0039265.1 mouse_genomes_project 3 158483209 158484080 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001343.1 MGP_WSBEiJ_G0001272.1 mouse_genomes_project 3 155019483 155020598 + TEC TEC MGP_WSBEiJ_T0013859.1 MGP_WSBEiJ_G0011989.1 mouse_genomes_project 3 110028842 110029714 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013598.1 MGP_WSBEiJ_G0011728.1 mouse_genomes_project 3 25522890 25523134 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058940.1 MGP_WSBEiJ_G0026296.1 mouse_genomes_project 3 5621127 5741196 - MGP_WSBEiJ_P0058940 Mrps28 protein_coding protein_coding MGP_WSBEiJ_T0011354.1 MGP_WSBEiJ_G0009511.1 mouse_genomes_project 3 158042119 158042230 + Gm26456 misc_RNA misc_RNA MGP_WSBEiJ_T0004272.1 MGP_WSBEiJ_G0003734.1 mouse_genomes_project 3 117253598 117272640 + Gm43109 antisense antisense MGP_WSBEiJ_T0060225.1 MGP_WSBEiJ_G0026566.1 mouse_genomes_project 3 81084864 81102619 + Asic5 protein_coding processed_transcript MGP_WSBEiJ_T0060226.1 MGP_WSBEiJ_G0026566.1 mouse_genomes_project 3 81099178 81127375 + MGP_WSBEiJ_P0060226 Asic5 protein_coding protein_coding MGP_WSBEiJ_T0059431.1 MGP_WSBEiJ_G0026400.1 mouse_genomes_project 3 34076565 34104731 - MGP_WSBEiJ_P0059431 Anxa5 protein_coding protein_coding MGP_WSBEiJ_T0059432.1 MGP_WSBEiJ_G0026400.1 mouse_genomes_project 3 34076806 34079981 - Anxa5 protein_coding retained_intron MGP_WSBEiJ_T0059433.1 MGP_WSBEiJ_G0026400.1 mouse_genomes_project 3 34079857 34104496 - MGP_WSBEiJ_P0059433 Anxa5 protein_coding protein_coding MGP_WSBEiJ_T0010349.1 MGP_WSBEiJ_G0008506.1 mouse_genomes_project 3 81214243 81214306 - Mir7010 miRNA miRNA MGP_WSBEiJ_T0013872.1 MGP_WSBEiJ_G0012002.1 mouse_genomes_project 3 114065687 114066517 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061710.1 MGP_WSBEiJ_G0026919.1 mouse_genomes_project 3 102937207 102989132 + MGP_WSBEiJ_P0061710 Ngf protein_coding protein_coding MGP_WSBEiJ_T0061711.1 MGP_WSBEiJ_G0026919.1 mouse_genomes_project 3 102937216 102978125 + MGP_WSBEiJ_P0061711 Ngf protein_coding protein_coding MGP_WSBEiJ_T0061712.1 MGP_WSBEiJ_G0026919.1 mouse_genomes_project 3 102937216 102989297 + MGP_WSBEiJ_P0061712 Ngf protein_coding protein_coding MGP_WSBEiJ_T0061713.1 MGP_WSBEiJ_G0026919.1 mouse_genomes_project 3 102956011 102989279 + MGP_WSBEiJ_P0061713 Ngf protein_coding protein_coding MGP_WSBEiJ_T0017381.1 MGP_WSBEiJ_G0014934.1 mouse_genomes_project 3 96253400 96255059 - Gm20627 processed_transcript lincRNA MGP_WSBEiJ_T0017382.1 MGP_WSBEiJ_G0014934.1 mouse_genomes_project 3 96253402 96254251 - Gm20627 processed_transcript retained_intron MGP_WSBEiJ_T0061068.1 MGP_WSBEiJ_G0026764.1 mouse_genomes_project 3 92620577 92622435 - MGP_WSBEiJ_P0061068 2310050C09Rik protein_coding protein_coding MGP_WSBEiJ_T0007418.1 MGP_WSBEiJ_G0006079.1 mouse_genomes_project 3 47065586 47084937 + Gm31415 lincRNA lincRNA MGP_WSBEiJ_T0061087.1 MGP_WSBEiJ_G0026776.1 mouse_genomes_project 3 93178766 93184723 + MGP_WSBEiJ_P0061087 Rptn protein_coding protein_coding MGP_WSBEiJ_T0010388.1 MGP_WSBEiJ_G0008545.1 mouse_genomes_project 3 139794079 139794160 - Mir6380 miRNA miRNA MGP_WSBEiJ_T0007502.1 MGP_WSBEiJ_G0006139.1 mouse_genomes_project 3 93085876 93249334 - lincRNA lincRNA MGP_WSBEiJ_T0062507.1 MGP_WSBEiJ_G0027091.1 mouse_genomes_project 3 126937468 127284602 + MGP_WSBEiJ_P0062507 Ndst4 protein_coding protein_coding MGP_WSBEiJ_T0062508.1 MGP_WSBEiJ_G0027091.1 mouse_genomes_project 3 126937482 127241768 + Ndst4 protein_coding retained_intron MGP_WSBEiJ_T0062509.1 MGP_WSBEiJ_G0027091.1 mouse_genomes_project 3 127105004 127164593 + MGP_WSBEiJ_P0062509 Ndst4 protein_coding protein_coding MGP_WSBEiJ_T0062510.1 MGP_WSBEiJ_G0027091.1 mouse_genomes_project 3 127236165 127284042 + MGP_WSBEiJ_P0062510 Ndst4 protein_coding protein_coding MGP_WSBEiJ_T0062511.1 MGP_WSBEiJ_G0027091.1 mouse_genomes_project 3 127236175 127246060 + Ndst4 protein_coding processed_transcript MGP_WSBEiJ_T0062512.1 MGP_WSBEiJ_G0027091.1 mouse_genomes_project 3 127265766 127280417 + MGP_WSBEiJ_P0062512 Ndst4 protein_coding protein_coding MGP_WSBEiJ_T0001122.1 MGP_WSBEiJ_G0001054.1 mouse_genomes_project 3 35316532 35320007 + TEC TEC MGP_WSBEiJ_T0013915.1 MGP_WSBEiJ_G0012045.1 mouse_genomes_project 3 131867592 131867943 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001216.1 MGP_WSBEiJ_G0001146.1 mouse_genomes_project 3 76716238 76717723 - TEC TEC MGP_WSBEiJ_T0062193.1 MGP_WSBEiJ_G0027027.1 mouse_genomes_project 3 109761939 109762511 + Henmt1 protein_coding processed_transcript MGP_WSBEiJ_T0062195.1 MGP_WSBEiJ_G0027027.1 mouse_genomes_project 3 109762125 109764775 + MGP_WSBEiJ_P0062195 Henmt1 protein_coding protein_coding MGP_WSBEiJ_T0062196.1 MGP_WSBEiJ_G0027027.1 mouse_genomes_project 3 109762150 109782429 + MGP_WSBEiJ_P0062196 Henmt1 protein_coding protein_coding MGP_WSBEiJ_T0062197.1 MGP_WSBEiJ_G0027027.1 mouse_genomes_project 3 109762180 109781074 + MGP_WSBEiJ_P0062197 Henmt1 protein_coding protein_coding MGP_WSBEiJ_T0062198.1 MGP_WSBEiJ_G0027027.1 mouse_genomes_project 3 109762549 109782527 + MGP_WSBEiJ_P0062198 Henmt1 protein_coding protein_coding MGP_WSBEiJ_T0062199.1 MGP_WSBEiJ_G0027027.1 mouse_genomes_project 3 109763352 109781968 + MGP_WSBEiJ_P0062199 Henmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062200.1 MGP_WSBEiJ_G0027027.1 mouse_genomes_project 3 109763352 109782441 + MGP_WSBEiJ_P0062200 Henmt1 protein_coding protein_coding MGP_WSBEiJ_T0013656.1 MGP_WSBEiJ_G0011786.1 mouse_genomes_project 3 47204618 47204974 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007647.1 MGP_WSBEiJ_G0006260.1 mouse_genomes_project 3 151963669 152006349 + Gm42649 lincRNA lincRNA MGP_WSBEiJ_T0007649.1 MGP_WSBEiJ_G0006260.1 mouse_genomes_project 3 151995550 151997804 + Gm42649 lincRNA lincRNA MGP_WSBEiJ_T0001321.1 MGP_WSBEiJ_G0001250.1 mouse_genomes_project 3 134650711 134653934 + TEC TEC MGP_WSBEiJ_T0059006.1 MGP_WSBEiJ_G0026316.1 mouse_genomes_project 3 11558313 11585260 + MGP_WSBEiJ_P0059006 E2f5 protein_coding protein_coding MGP_WSBEiJ_T0059007.1 MGP_WSBEiJ_G0026316.1 mouse_genomes_project 3 11558343 11585259 + MGP_WSBEiJ_P0059007 E2f5 protein_coding protein_coding MGP_WSBEiJ_T0001346.1 MGP_WSBEiJ_G0001275.1 mouse_genomes_project 3 155238199 155239649 - TEC TEC MGP_WSBEiJ_T0059418.1 MGP_WSBEiJ_G0026397.1 mouse_genomes_project 3 33680144 33706997 + MGP_WSBEiJ_P0059418 Acad9 protein_coding protein_coding MGP_WSBEiJ_T0059419.1 MGP_WSBEiJ_G0026397.1 mouse_genomes_project 3 33680232 33690114 + MGP_WSBEiJ_P0059419 Acad9 protein_coding protein_coding MGP_WSBEiJ_T0059420.1 MGP_WSBEiJ_G0026397.1 mouse_genomes_project 3 33680237 33705403 + Acad9 protein_coding retained_intron MGP_WSBEiJ_T0059421.1 MGP_WSBEiJ_G0026397.1 mouse_genomes_project 3 33690862 33694800 + Acad9 protein_coding retained_intron MGP_WSBEiJ_T0059422.1 MGP_WSBEiJ_G0026397.1 mouse_genomes_project 3 33692545 33702945 + MGP_WSBEiJ_P0059422 Acad9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059423.1 MGP_WSBEiJ_G0026397.1 mouse_genomes_project 3 33694239 33702597 + Acad9 protein_coding retained_intron MGP_WSBEiJ_T0059424.1 MGP_WSBEiJ_G0026397.1 mouse_genomes_project 3 33694314 33705403 + Acad9 protein_coding retained_intron MGP_WSBEiJ_T0059425.1 MGP_WSBEiJ_G0026397.1 mouse_genomes_project 3 33703889 33705666 + Acad9 protein_coding retained_intron MGP_WSBEiJ_T0061338.1 MGP_WSBEiJ_G0026823.1 mouse_genomes_project 3 95512222 95543155 + MGP_WSBEiJ_P0061338 Hormad1 protein_coding protein_coding MGP_WSBEiJ_T0061339.1 MGP_WSBEiJ_G0026823.1 mouse_genomes_project 3 95512223 95543076 + MGP_WSBEiJ_P0061339 Hormad1 protein_coding protein_coding MGP_WSBEiJ_T0061340.1 MGP_WSBEiJ_G0026823.1 mouse_genomes_project 3 95512223 95541275 + MGP_WSBEiJ_P0061340 Hormad1 protein_coding protein_coding MGP_WSBEiJ_T0062366.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122506700 122522859 - MGP_WSBEiJ_P0062366 Rwdd3 protein_coding protein_coding MGP_WSBEiJ_T0062367.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122506702 122508106 - Rwdd3 protein_coding retained_intron MGP_WSBEiJ_T0062368.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122507145 122510135 - MGP_WSBEiJ_P0062368 Rwdd3 protein_coding protein_coding MGP_WSBEiJ_T0062369.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122507148 122522852 - MGP_WSBEiJ_P0062369 Rwdd3 protein_coding protein_coding MGP_WSBEiJ_T0062370.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122507167 122522858 - MGP_WSBEiJ_P0062370 Rwdd3 protein_coding protein_coding MGP_WSBEiJ_T0062371.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122507241 122522858 - MGP_WSBEiJ_P0062371 Rwdd3 protein_coding protein_coding MGP_WSBEiJ_T0062372.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122507580 122522859 - MGP_WSBEiJ_P0062372 Rwdd3 protein_coding protein_coding MGP_WSBEiJ_T0062373.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122509296 122522859 - Rwdd3 protein_coding retained_intron MGP_WSBEiJ_T0062374.1 MGP_WSBEiJ_G0027064.1 mouse_genomes_project 3 122520333 122522858 - Rwdd3 protein_coding retained_intron MGP_WSBEiJ_T0062979.1 MGP_WSBEiJ_G0027175.1 mouse_genomes_project 3 144708984 144729711 + Gbp5 protein_coding processed_transcript MGP_WSBEiJ_T0062980.1 MGP_WSBEiJ_G0027175.1 mouse_genomes_project 3 144711960 144735126 + MGP_WSBEiJ_P0062980 Gbp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062981.1 MGP_WSBEiJ_G0027175.1 mouse_genomes_project 3 144711968 144735017 + MGP_WSBEiJ_P0062981 Gbp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062982.1 MGP_WSBEiJ_G0027175.1 mouse_genomes_project 3 144713432 144734149 + MGP_WSBEiJ_P0062982 Gbp5 protein_coding protein_coding MGP_WSBEiJ_T0062983.1 MGP_WSBEiJ_G0027175.1 mouse_genomes_project 3 144721438 144725997 + Gbp5 protein_coding retained_intron MGP_WSBEiJ_T0059371.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31495451 31564591 + MGP_WSBEiJ_P0059371 Fxr1 protein_coding protein_coding MGP_WSBEiJ_T0059372.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31538309 31568168 + MGP_WSBEiJ_P0059372 Fxr1 protein_coding protein_coding MGP_WSBEiJ_T0059373.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31538404 31569147 + MGP_WSBEiJ_P0059373 Fxr1 protein_coding protein_coding MGP_WSBEiJ_T0059374.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31538404 31568197 + MGP_WSBEiJ_P0059374 Fxr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059375.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31538404 31568171 + MGP_WSBEiJ_P0059375 Fxr1 protein_coding protein_coding MGP_WSBEiJ_T0059376.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31538404 31568171 + MGP_WSBEiJ_P0059376 Fxr1 protein_coding protein_coding MGP_WSBEiJ_T0059377.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31538408 31540542 + Fxr1 protein_coding retained_intron MGP_WSBEiJ_T0059378.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31538411 31545401 + MGP_WSBEiJ_P0059378 Fxr1 protein_coding protein_coding MGP_WSBEiJ_T0059379.1 MGP_WSBEiJ_G0026390.1 mouse_genomes_project 3 31545495 31547984 + Fxr1 protein_coding retained_intron MGP_WSBEiJ_T0013856.1 MGP_WSBEiJ_G0011986.1 mouse_genomes_project 3 109014927 109015456 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059874.1 MGP_WSBEiJ_G0026482.1 mouse_genomes_project 3 57107661 57142478 - MGP_WSBEiJ_P0059874 Clrn1 protein_coding protein_coding MGP_WSBEiJ_T0059875.1 MGP_WSBEiJ_G0026482.1 mouse_genomes_project 3 57108848 57142478 - MGP_WSBEiJ_P0059875 Clrn1 protein_coding protein_coding MGP_WSBEiJ_T0059876.1 MGP_WSBEiJ_G0026482.1 mouse_genomes_project 3 57109614 57142606 - MGP_WSBEiJ_P0059876 Clrn1 protein_coding protein_coding MGP_WSBEiJ_T0013781.1 MGP_WSBEiJ_G0011911.1 mouse_genomes_project 3 87320451 87320872 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004245.1 MGP_WSBEiJ_G0003721.1 mouse_genomes_project 3 104514400 104518446 - Phtf1os antisense antisense MGP_WSBEiJ_T0004280.1 MGP_WSBEiJ_G0003740.1 mouse_genomes_project 3 123877669 123910738 - Gm42836 antisense antisense MGP_WSBEiJ_T0007365.1 MGP_WSBEiJ_G0006037.1 mouse_genomes_project 3 19182285 19184013 - Gm43672 lincRNA lincRNA MGP_WSBEiJ_T0013697.1 MGP_WSBEiJ_G0011827.1 mouse_genomes_project 3 58008890 58009004 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059231.1 MGP_WSBEiJ_G0026366.1 mouse_genomes_project 3 28043813 28071331 + MGP_WSBEiJ_P0059231 Lrriq4 protein_coding protein_coding MGP_WSBEiJ_T0059232.1 MGP_WSBEiJ_G0026366.1 mouse_genomes_project 3 28044636 28071199 + MGP_WSBEiJ_P0059232 Lrriq4 protein_coding protein_coding MGP_WSBEiJ_T0059233.1 MGP_WSBEiJ_G0026366.1 mouse_genomes_project 3 28047192 28071199 + MGP_WSBEiJ_P0059233 Lrriq4 protein_coding protein_coding MGP_WSBEiJ_T0097327.1 MGP_WSBEiJ_G0036002.1 mouse_genomes_project 3 84812574 84831766 - Gm15535 sense_intronic sense_intronic MGP_WSBEiJ_T0097328.1 MGP_WSBEiJ_G0036002.1 mouse_genomes_project 3 84815959 84831672 - Gm15535 sense_intronic sense_intronic MGP_WSBEiJ_T0007538.1 MGP_WSBEiJ_G0006170.1 mouse_genomes_project 3 107531069 107578929 - Gm35507 lincRNA lincRNA MGP_WSBEiJ_T0001106.1 MGP_WSBEiJ_G0001038.1 mouse_genomes_project 3 30565030 30567468 - TEC TEC MGP_WSBEiJ_T0060466.1 MGP_WSBEiJ_G0026625.1 mouse_genomes_project 3 87436365 87478815 + MGP_WSBEiJ_P0060466 Iqgap3 protein_coding protein_coding MGP_WSBEiJ_T0060467.1 MGP_WSBEiJ_G0026625.1 mouse_genomes_project 3 87436414 87441992 + Iqgap3 protein_coding retained_intron MGP_WSBEiJ_T0060468.1 MGP_WSBEiJ_G0026625.1 mouse_genomes_project 3 87436422 87465897 + MGP_WSBEiJ_P0060468 Iqgap3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060469.1 MGP_WSBEiJ_G0026625.1 mouse_genomes_project 3 87440589 87441985 + Iqgap3 protein_coding retained_intron MGP_WSBEiJ_T0060470.1 MGP_WSBEiJ_G0026625.1 mouse_genomes_project 3 87460955 87478811 + MGP_WSBEiJ_P0060470 Iqgap3 protein_coding protein_coding MGP_WSBEiJ_T0060471.1 MGP_WSBEiJ_G0026625.1 mouse_genomes_project 3 87464628 87469916 + Iqgap3 protein_coding retained_intron MGP_WSBEiJ_T0001170.1 MGP_WSBEiJ_G0001100.1 mouse_genomes_project 3 50016516 50017135 - TEC TEC MGP_WSBEiJ_T0061023.1 MGP_WSBEiJ_G0026725.1 mouse_genomes_project 3 90470913 90472851 - MGP_WSBEiJ_P0061023 protein_coding protein_coding MGP_WSBEiJ_T0013777.1 MGP_WSBEiJ_G0011907.1 mouse_genomes_project 3 86330176 86331122 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060026.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65553239 65927814 + MGP_WSBEiJ_P0060026 Rsrc1 protein_coding protein_coding MGP_WSBEiJ_T0060027.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65557544 65568327 + MGP_WSBEiJ_P0060027 Rsrc1 protein_coding protein_coding MGP_WSBEiJ_T0060028.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65557546 65929650 + MGP_WSBEiJ_P0060028 Rsrc1 protein_coding protein_coding MGP_WSBEiJ_T0060029.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65557559 65662876 + Rsrc1 protein_coding retained_intron MGP_WSBEiJ_T0060030.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65557559 65924981 + MGP_WSBEiJ_P0060030 Rsrc1 protein_coding protein_coding MGP_WSBEiJ_T0060031.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65557577 65929645 + MGP_WSBEiJ_P0060031 Rsrc1 protein_coding protein_coding MGP_WSBEiJ_T0060032.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65557578 65927813 + MGP_WSBEiJ_P0060032 Rsrc1 protein_coding protein_coding MGP_WSBEiJ_T0060033.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65557841 65929651 + MGP_WSBEiJ_P0060033 Rsrc1 protein_coding protein_coding MGP_WSBEiJ_T0060034.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65557852 65566562 + MGP_WSBEiJ_P0060034 Rsrc1 protein_coding protein_coding MGP_WSBEiJ_T0060035.1 MGP_WSBEiJ_G0026520.1 mouse_genomes_project 3 65562847 65566743 + Rsrc1 protein_coding retained_intron MGP_WSBEiJ_T0007605.1 MGP_WSBEiJ_G0006225.1 mouse_genomes_project 3 139805888 139813928 - Gm31678 lincRNA lincRNA MGP_WSBEiJ_T0013838.1 MGP_WSBEiJ_G0011968.1 mouse_genomes_project 3 103319601 103320009 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061940.1 MGP_WSBEiJ_G0026966.1 mouse_genomes_project 3 106664594 106672575 - MGP_WSBEiJ_P0061940 Chil5 protein_coding protein_coding MGP_WSBEiJ_T0061941.1 MGP_WSBEiJ_G0026966.1 mouse_genomes_project 3 106664640 106672580 - MGP_WSBEiJ_P0061941 Chil5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061942.1 MGP_WSBEiJ_G0026966.1 mouse_genomes_project 3 106664807 106683731 - MGP_WSBEiJ_P0061942 Chil5 protein_coding protein_coding MGP_WSBEiJ_T0007461.1 MGP_WSBEiJ_G0006113.1 mouse_genomes_project 3 78320234 78321235 + 6430573P05Rik lincRNA lincRNA MGP_WSBEiJ_T0007462.1 MGP_WSBEiJ_G0006113.1 mouse_genomes_project 3 78320453 78322906 + 6430573P05Rik lincRNA lincRNA MGP_WSBEiJ_T0007463.1 MGP_WSBEiJ_G0006113.1 mouse_genomes_project 3 78320789 78321866 + 6430573P05Rik lincRNA lincRNA MGP_WSBEiJ_T0013873.1 MGP_WSBEiJ_G0012003.1 mouse_genomes_project 3 114666558 114667165 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001338.1 MGP_WSBEiJ_G0001267.1 mouse_genomes_project 3 151086138 151087008 + TEC TEC MGP_WSBEiJ_T0013581.1 MGP_WSBEiJ_G0011711.1 mouse_genomes_project 3 17921678 17921888 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060528.1 MGP_WSBEiJ_G0026638.1 mouse_genomes_project 3 87770384 87790193 - MGP_WSBEiJ_P0060528 Pmf1 protein_coding protein_coding MGP_WSBEiJ_T0060529.1 MGP_WSBEiJ_G0026638.1 mouse_genomes_project 3 87770384 87790188 - MGP_WSBEiJ_P0060529 Pmf1 protein_coding protein_coding MGP_WSBEiJ_T0060530.1 MGP_WSBEiJ_G0026638.1 mouse_genomes_project 3 87770620 87790127 - Pmf1 protein_coding processed_transcript MGP_WSBEiJ_T0060531.1 MGP_WSBEiJ_G0026638.1 mouse_genomes_project 3 87771984 87772962 - Pmf1 protein_coding retained_intron MGP_WSBEiJ_T0060532.1 MGP_WSBEiJ_G0026638.1 mouse_genomes_project 3 87772309 87790148 - MGP_WSBEiJ_P0060532 Pmf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060533.1 MGP_WSBEiJ_G0026638.1 mouse_genomes_project 3 87773606 87775955 - Pmf1 protein_coding retained_intron MGP_WSBEiJ_T0060534.1 MGP_WSBEiJ_G0026638.1 mouse_genomes_project 3 87775777 87790170 - Pmf1 protein_coding retained_intron MGP_WSBEiJ_T0097331.1 MGP_WSBEiJ_G0036005.1 mouse_genomes_project 3 94346283 94348442 - Gm43773 sense_intronic sense_intronic MGP_WSBEiJ_T0001237.1 MGP_WSBEiJ_G0001167.1 mouse_genomes_project 3 96789996 96790791 - TEC TEC MGP_WSBEiJ_T0059537.1 MGP_WSBEiJ_G0026419.1 mouse_genomes_project 3 38245924 38270053 + MGP_WSBEiJ_P0059537 Intu protein_coding protein_coding MGP_WSBEiJ_T0059538.1 MGP_WSBEiJ_G0026419.1 mouse_genomes_project 3 38255404 38324342 + MGP_WSBEiJ_P0059538 Intu protein_coding protein_coding MGP_WSBEiJ_T0059539.1 MGP_WSBEiJ_G0026419.1 mouse_genomes_project 3 38291187 38312270 + MGP_WSBEiJ_P0059539 Intu protein_coding protein_coding MGP_WSBEiJ_T0017361.1 MGP_WSBEiJ_G0014925.1 mouse_genomes_project 3 48532329 48616740 - Gm6209 processed_transcript lincRNA MGP_WSBEiJ_T0017362.1 MGP_WSBEiJ_G0014925.1 mouse_genomes_project 3 48587817 48592357 - Gm6209 processed_transcript retained_intron MGP_WSBEiJ_T0013860.1 MGP_WSBEiJ_G0011990.1 mouse_genomes_project 3 110771505 110771989 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062393.1 MGP_WSBEiJ_G0027069.1 mouse_genomes_project 3 123073411 123085508 + MGP_WSBEiJ_P0062393 4930432M17Rik protein_coding protein_coding MGP_WSBEiJ_T0062394.1 MGP_WSBEiJ_G0027069.1 mouse_genomes_project 3 123073966 123085361 + MGP_WSBEiJ_P0062394 4930432M17Rik protein_coding protein_coding MGP_WSBEiJ_T0017385.1 MGP_WSBEiJ_G0014936.1 mouse_genomes_project 3 104334675 104340042 + Gm15471 processed_transcript retained_intron MGP_WSBEiJ_T0017386.1 MGP_WSBEiJ_G0014936.1 mouse_genomes_project 3 104334682 104340043 + Gm15471 processed_transcript antisense MGP_WSBEiJ_T0007454.1 MGP_WSBEiJ_G0006107.1 mouse_genomes_project 3 72136489 72271798 + Gm38353 lincRNA lincRNA MGP_WSBEiJ_T0062893.1 MGP_WSBEiJ_G0027158.1 mouse_genomes_project 3 140132244 140175462 - MGP_WSBEiJ_P0062893 Mttp protein_coding protein_coding MGP_WSBEiJ_T0062894.1 MGP_WSBEiJ_G0027158.1 mouse_genomes_project 3 140132259 140187452 - MGP_WSBEiJ_P0062894 Mttp protein_coding unknown_likely_coding MGP_WSBEiJ_T0062895.1 MGP_WSBEiJ_G0027158.1 mouse_genomes_project 3 140133475 140187492 - MGP_WSBEiJ_P0062895 Mttp protein_coding protein_coding MGP_WSBEiJ_T0062896.1 MGP_WSBEiJ_G0027158.1 mouse_genomes_project 3 140186366 140189067 - Mttp protein_coding retained_intron MGP_WSBEiJ_T0097362.1 MGP_WSBEiJ_G0036036.1 mouse_genomes_project 3 104709606 104711245 - Gm42701 sense_intronic sense_intronic MGP_WSBEiJ_T0062787.1 MGP_WSBEiJ_G0027139.1 mouse_genomes_project 3 137187944 137224120 + MGP_WSBEiJ_P0062787 Slc9b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062788.1 MGP_WSBEiJ_G0027139.1 mouse_genomes_project 3 137187975 137206334 + Slc9b2 protein_coding retained_intron MGP_WSBEiJ_T0062789.1 MGP_WSBEiJ_G0027139.1 mouse_genomes_project 3 137187986 137199872 + MGP_WSBEiJ_P0062789 Slc9b2 protein_coding protein_coding MGP_WSBEiJ_T0062790.1 MGP_WSBEiJ_G0027139.1 mouse_genomes_project 3 137187989 137226762 + MGP_WSBEiJ_P0062790 Slc9b2 protein_coding protein_coding MGP_WSBEiJ_T0062791.1 MGP_WSBEiJ_G0027139.1 mouse_genomes_project 3 137211804 137224352 + Slc9b2 protein_coding retained_intron MGP_WSBEiJ_T0013945.1 MGP_WSBEiJ_G0012075.1 mouse_genomes_project 3 140580676 140581045 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099447.1 MGP_WSBEiJ_G0038110.1 mouse_genomes_project 3 85411148 85411216 - Snord73a snoRNA snoRNA MGP_WSBEiJ_T0007378.1 MGP_WSBEiJ_G0006049.1 mouse_genomes_project 3 31931075 31932742 + Gm43208 lincRNA lincRNA MGP_WSBEiJ_T0013885.1 MGP_WSBEiJ_G0012015.1 mouse_genomes_project 3 118306518 118307195 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013886.1 MGP_WSBEiJ_G0012016.1 mouse_genomes_project 3 118399296 118399939 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013646.1 MGP_WSBEiJ_G0011776.1 mouse_genomes_project 3 43468492 43468853 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097341.1 MGP_WSBEiJ_G0036015.1 mouse_genomes_project 3 101050968 101052774 - Gm43463 sense_intronic sense_intronic MGP_WSBEiJ_T0013976.1 MGP_WSBEiJ_G0012106.1 mouse_genomes_project 3 154811059 154811766 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001230.1 MGP_WSBEiJ_G0001160.1 mouse_genomes_project 3 93178765 93179964 + TEC TEC MGP_WSBEiJ_T0001218.1 MGP_WSBEiJ_G0001148.1 mouse_genomes_project 3 78655764 78657053 - TEC TEC MGP_WSBEiJ_T0004307.1 MGP_WSBEiJ_G0003760.1 mouse_genomes_project 3 139881322 139883111 - Gm43403 antisense antisense MGP_WSBEiJ_T0004308.1 MGP_WSBEiJ_G0003760.1 mouse_genomes_project 3 139882424 139882921 - Gm43403 antisense antisense MGP_WSBEiJ_T0013594.1 MGP_WSBEiJ_G0011724.1 mouse_genomes_project 3 24198743 24198854 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001345.1 MGP_WSBEiJ_G0001274.1 mouse_genomes_project 3 155235250 155237562 - TEC TEC MGP_WSBEiJ_T0013613.1 MGP_WSBEiJ_G0011743.1 mouse_genomes_project 3 33577976 33578297 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061060.1 MGP_WSBEiJ_G0026757.1 mouse_genomes_project 3 92485904 92487320 - MGP_WSBEiJ_P0061060 Gm38119 protein_coding protein_coding MGP_WSBEiJ_T0059455.1 MGP_WSBEiJ_G0026405.1 mouse_genomes_project 3 34252353 34327812 - MGP_WSBEiJ_P0059455 Trpc3 protein_coding protein_coding MGP_WSBEiJ_T0059456.1 MGP_WSBEiJ_G0026405.1 mouse_genomes_project 3 34252434 34253236 - Trpc3 protein_coding processed_transcript MGP_WSBEiJ_T0059457.1 MGP_WSBEiJ_G0026405.1 mouse_genomes_project 3 34252434 34253214 - Trpc3 protein_coding processed_transcript MGP_WSBEiJ_T0059458.1 MGP_WSBEiJ_G0026405.1 mouse_genomes_project 3 34271657 34273921 - Trpc3 protein_coding retained_intron MGP_WSBEiJ_T0059459.1 MGP_WSBEiJ_G0026405.1 mouse_genomes_project 3 34306265 34327812 - Trpc3 protein_coding retained_intron MGP_WSBEiJ_T0013590.1 MGP_WSBEiJ_G0011720.1 mouse_genomes_project 3 20420183 20420559 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004317.1 MGP_WSBEiJ_G0003766.1 mouse_genomes_project 3 143862911 143882596 - Gm15689 antisense antisense MGP_WSBEiJ_T0007633.1 MGP_WSBEiJ_G0006249.1 mouse_genomes_project 3 146641934 146643027 + Gm43446 lincRNA lincRNA MGP_WSBEiJ_T0007340.1 MGP_WSBEiJ_G0006021.1 mouse_genomes_project 3 6604708 6634495 + Gm16337 lincRNA lincRNA MGP_WSBEiJ_T0098194.1 MGP_WSBEiJ_G0036857.1 mouse_genomes_project 3 95761297 95761485 - Gm26361 snRNA snRNA MGP_WSBEiJ_T0007654.1 MGP_WSBEiJ_G0006264.1 mouse_genomes_project 3 154097793 154100322 + 4930555A03Rik lincRNA lincRNA MGP_WSBEiJ_T0007655.1 MGP_WSBEiJ_G0006264.1 mouse_genomes_project 3 154097829 154099973 + 4930555A03Rik lincRNA lincRNA MGP_WSBEiJ_T0007656.1 MGP_WSBEiJ_G0006264.1 mouse_genomes_project 3 154097830 154099259 + 4930555A03Rik lincRNA lincRNA MGP_WSBEiJ_T0007657.1 MGP_WSBEiJ_G0006264.1 mouse_genomes_project 3 154098670 154099971 + 4930555A03Rik lincRNA lincRNA MGP_WSBEiJ_T0097043.1 MGP_WSBEiJ_G0035724.1 mouse_genomes_project 3 49849001 49849118 + n-R5s196 rRNA rRNA MGP_WSBEiJ_T0013895.1 MGP_WSBEiJ_G0012025.1 mouse_genomes_project 3 123228512 123228918 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001341.1 MGP_WSBEiJ_G0001270.1 mouse_genomes_project 3 153918590 153924620 - TEC TEC MGP_WSBEiJ_T0001176.1 MGP_WSBEiJ_G0001106.1 mouse_genomes_project 3 51153319 51155984 + TEC TEC MGP_WSBEiJ_T0099486.1 MGP_WSBEiJ_G0038149.1 mouse_genomes_project 3 156776346 156776471 + Gm24395 snoRNA snoRNA MGP_WSBEiJ_T0061045.1 MGP_WSBEiJ_G0026744.1 mouse_genomes_project 3 92239937 92241881 - MGP_WSBEiJ_P0061045 Sprr1a protein_coding protein_coding MGP_WSBEiJ_T0007665.1 MGP_WSBEiJ_G0006271.1 mouse_genomes_project 3 159038997 159045542 - Gm42947 lincRNA lincRNA MGP_WSBEiJ_T0098172.1 MGP_WSBEiJ_G0036835.1 mouse_genomes_project 3 71503250 71503401 - Gm22451 snRNA snRNA MGP_WSBEiJ_T0063435.1 MGP_WSBEiJ_G0027252.1 mouse_genomes_project 3 162616770 162642555 + MGP_WSBEiJ_P0063435 Rpe65 protein_coding protein_coding MGP_WSBEiJ_T0063436.1 MGP_WSBEiJ_G0027252.1 mouse_genomes_project 3 162616813 162623992 + MGP_WSBEiJ_P0063436 Rpe65 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063437.1 MGP_WSBEiJ_G0027252.1 mouse_genomes_project 3 162616828 162642034 + MGP_WSBEiJ_P0063437 Rpe65 protein_coding protein_coding MGP_WSBEiJ_T0001248.1 MGP_WSBEiJ_G0001178.1 mouse_genomes_project 3 107284442 107286474 + TEC TEC MGP_WSBEiJ_T0013524.1 MGP_WSBEiJ_G0011654.1 mouse_genomes_project 3 3226010 3226992 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061462.1 MGP_WSBEiJ_G0026846.1 mouse_genomes_project 3 96215546 96216066 - MGP_WSBEiJ_P0061462 Hist2h2ac protein_coding protein_coding MGP_WSBEiJ_T0097381.1 MGP_WSBEiJ_G0036055.1 mouse_genomes_project 3 121081269 121084508 - Gm42664 sense_intronic sense_intronic MGP_WSBEiJ_T0007422.1 MGP_WSBEiJ_G0006082.1 mouse_genomes_project 3 50166528 50259415 - Gm37202 lincRNA lincRNA MGP_WSBEiJ_T0013624.1 MGP_WSBEiJ_G0011754.1 mouse_genomes_project 3 35229747 35230068 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060230.1 MGP_WSBEiJ_G0026568.1 mouse_genomes_project 3 81200530 81255262 - MGP_WSBEiJ_P0060230 Gucy1a3 protein_coding protein_coding MGP_WSBEiJ_T0060231.1 MGP_WSBEiJ_G0026568.1 mouse_genomes_project 3 81200540 81255976 - MGP_WSBEiJ_P0060231 Gucy1a3 protein_coding protein_coding MGP_WSBEiJ_T0060232.1 MGP_WSBEiJ_G0026568.1 mouse_genomes_project 3 81202683 81210109 - MGP_WSBEiJ_P0060232 Gucy1a3 protein_coding protein_coding MGP_WSBEiJ_T0060233.1 MGP_WSBEiJ_G0026568.1 mouse_genomes_project 3 81214787 81255978 - Gucy1a3 protein_coding retained_intron MGP_WSBEiJ_T0060234.1 MGP_WSBEiJ_G0026568.1 mouse_genomes_project 3 81227170 81255794 - Gucy1a3 protein_coding processed_transcript MGP_WSBEiJ_T0001326.1 MGP_WSBEiJ_G0001255.1 mouse_genomes_project 3 137311156 137318896 - TEC TEC MGP_WSBEiJ_T0099469.1 MGP_WSBEiJ_G0038132.1 mouse_genomes_project 3 117190237 117190369 - Gm26344 snoRNA snoRNA MGP_WSBEiJ_T0059813.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 53806319 54381157 - MGP_WSBEiJ_P0059813 Nbea protein_coding protein_coding MGP_WSBEiJ_T0059814.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 53806323 53872546 - Nbea protein_coding processed_transcript MGP_WSBEiJ_T0059815.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 53807644 53979330 - Nbea protein_coding processed_transcript MGP_WSBEiJ_T0059816.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 53878001 53909452 - Nbea protein_coding retained_intron MGP_WSBEiJ_T0059817.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 53971156 53980371 - Nbea protein_coding retained_intron MGP_WSBEiJ_T0059818.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 53972059 53975918 - Nbea protein_coding retained_intron MGP_WSBEiJ_T0059820.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 54164279 54171597 - Nbea protein_coding retained_intron MGP_WSBEiJ_T0059821.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 54204904 54207331 - Nbea protein_coding retained_intron MGP_WSBEiJ_T0059822.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 54220454 54223508 - Nbea protein_coding retained_intron MGP_WSBEiJ_T0059823.1 MGP_WSBEiJ_G0026467.1 mouse_genomes_project 3 54231009 54239398 - Nbea protein_coding retained_intron MGP_WSBEiJ_T0062829.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137488053 137600648 - MGP_WSBEiJ_P0062829 Nfkb1 protein_coding protein_coding MGP_WSBEiJ_T0062830.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137488055 137512722 - MGP_WSBEiJ_P0062830 Nfkb1 protein_coding protein_coding MGP_WSBEiJ_T0062831.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137488143 137508301 - MGP_WSBEiJ_P0062831 Nfkb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062832.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137488280 137512935 - Nfkb1 protein_coding retained_intron MGP_WSBEiJ_T0062833.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137488677 137575051 - MGP_WSBEiJ_P0062833 Nfkb1 protein_coding protein_coding MGP_WSBEiJ_T0062834.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137488680 137576591 - MGP_WSBEiJ_P0062834 Nfkb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062835.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137495458 137499126 - Nfkb1 protein_coding processed_transcript MGP_WSBEiJ_T0062836.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137506363 137508364 - Nfkb1 protein_coding retained_intron MGP_WSBEiJ_T0062837.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137516391 137600649 - Nfkb1 protein_coding retained_intron MGP_WSBEiJ_T0062838.1 MGP_WSBEiJ_G0027144.1 mouse_genomes_project 3 137524892 137529015 - Nfkb1 protein_coding retained_intron MGP_WSBEiJ_T0061395.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95799488 95828181 - MGP_WSBEiJ_P0061395 Prpf3 protein_coding protein_coding MGP_WSBEiJ_T0061396.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95799953 95805033 - MGP_WSBEiJ_P0061396 Prpf3 protein_coding protein_coding MGP_WSBEiJ_T0061397.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95799982 95819022 - Prpf3 protein_coding retained_intron MGP_WSBEiJ_T0061398.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95799986 95802172 - Prpf3 protein_coding retained_intron MGP_WSBEiJ_T0061399.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95799986 95828049 - MGP_WSBEiJ_P0061399 Prpf3 protein_coding protein_coding MGP_WSBEiJ_T0061400.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95805859 95814616 - Prpf3 protein_coding processed_transcript MGP_WSBEiJ_T0061401.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95813253 95815624 - Prpf3 protein_coding retained_intron MGP_WSBEiJ_T0061402.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95816890 95823916 - MGP_WSBEiJ_P0061402 Prpf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061403.1 MGP_WSBEiJ_G0026831.1 mouse_genomes_project 3 95818983 95828077 - Prpf3 protein_coding retained_intron MGP_WSBEiJ_T0062925.1 MGP_WSBEiJ_G0027166.1 mouse_genomes_project 3 140525985 140564407 - MGP_WSBEiJ_P0062925 Metap1 protein_coding protein_coding MGP_WSBEiJ_T0062926.1 MGP_WSBEiJ_G0027166.1 mouse_genomes_project 3 140526710 140535766 - MGP_WSBEiJ_P0062926 Metap1 protein_coding protein_coding MGP_WSBEiJ_T0062927.1 MGP_WSBEiJ_G0027166.1 mouse_genomes_project 3 140533294 140542065 - Metap1 protein_coding retained_intron MGP_WSBEiJ_T0062928.1 MGP_WSBEiJ_G0027166.1 mouse_genomes_project 3 140533355 140542153 - Metap1 protein_coding retained_intron MGP_WSBEiJ_T0062929.1 MGP_WSBEiJ_G0027166.1 mouse_genomes_project 3 140535764 140548652 - Metap1 protein_coding processed_transcript MGP_WSBEiJ_T0062930.1 MGP_WSBEiJ_G0027166.1 mouse_genomes_project 3 140542408 140564291 - MGP_WSBEiJ_P0062930 Metap1 protein_coding protein_coding MGP_WSBEiJ_T0062931.1 MGP_WSBEiJ_G0027166.1 mouse_genomes_project 3 140547127 140564261 - Metap1 protein_coding retained_intron MGP_WSBEiJ_T0007416.1 MGP_WSBEiJ_G0006077.1 mouse_genomes_project 3 46601028 46604311 - 1700018B24Rik lincRNA lincRNA MGP_WSBEiJ_T0059015.1 MGP_WSBEiJ_G0026320.1 mouse_genomes_project 3 11841104 11843145 + Car3 protein_coding retained_intron MGP_WSBEiJ_T0059016.1 MGP_WSBEiJ_G0026320.1 mouse_genomes_project 3 11841130 11850132 + MGP_WSBEiJ_P0059016 Car3 protein_coding protein_coding MGP_WSBEiJ_T0059017.1 MGP_WSBEiJ_G0026320.1 mouse_genomes_project 3 11846786 11849678 + Car3 protein_coding retained_intron MGP_WSBEiJ_T0098157.1 MGP_WSBEiJ_G0036820.1 mouse_genomes_project 3 47675661 47675768 + Gm23096 snRNA snRNA MGP_WSBEiJ_T0059977.1 MGP_WSBEiJ_G0026506.1 mouse_genomes_project 3 62383593 62414753 - MGP_WSBEiJ_P0059977 Slc33a1 protein_coding protein_coding MGP_WSBEiJ_T0059978.1 MGP_WSBEiJ_G0026506.1 mouse_genomes_project 3 62390204 62414855 - MGP_WSBEiJ_P0059978 Slc33a1 protein_coding protein_coding MGP_WSBEiJ_T0059979.1 MGP_WSBEiJ_G0026506.1 mouse_genomes_project 3 62390288 62414459 - MGP_WSBEiJ_P0059979 Slc33a1 protein_coding protein_coding MGP_WSBEiJ_T0058989.1 MGP_WSBEiJ_G0026312.1 mouse_genomes_project 3 7355628 7378664 - MGP_WSBEiJ_P0058989 Snx16 protein_coding protein_coding MGP_WSBEiJ_T0058990.1 MGP_WSBEiJ_G0026312.1 mouse_genomes_project 3 7355957 7378649 - MGP_WSBEiJ_P0058990 Snx16 protein_coding protein_coding MGP_WSBEiJ_T0058991.1 MGP_WSBEiJ_G0026312.1 mouse_genomes_project 3 7356747 7378662 - MGP_WSBEiJ_P0058991 Snx16 protein_coding protein_coding MGP_WSBEiJ_T0011330.1 MGP_WSBEiJ_G0009487.1 mouse_genomes_project 3 10798894 10799189 + Gm25981 misc_RNA misc_RNA MGP_WSBEiJ_T0007594.1 MGP_WSBEiJ_G0006215.1 mouse_genomes_project 3 135685537 135688142 - Gm30484 lincRNA lincRNA MGP_WSBEiJ_T0061056.1 MGP_WSBEiJ_G0026753.1 mouse_genomes_project 3 92425304 92427011 - MGP_WSBEiJ_P0061056 Lce1a2 protein_coding protein_coding MGP_WSBEiJ_T0100774.1 MGP_WSBEiJ_G0039232.1 mouse_genomes_project 3 87752803 87753876 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001282.1 MGP_WSBEiJ_G0001212.1 mouse_genomes_project 3 125909316 125910254 - TEC TEC MGP_WSBEiJ_T0097337.1 MGP_WSBEiJ_G0036011.1 mouse_genomes_project 3 100866059 100868756 + Gm42868 sense_intronic sense_intronic MGP_WSBEiJ_T0063432.1 MGP_WSBEiJ_G0027251.1 mouse_genomes_project 3 162512166 162546938 + MGP_WSBEiJ_P0063432 Depdc1a protein_coding protein_coding MGP_WSBEiJ_T0063433.1 MGP_WSBEiJ_G0027251.1 mouse_genomes_project 3 162512184 162546559 + MGP_WSBEiJ_P0063433 Depdc1a protein_coding protein_coding MGP_WSBEiJ_T0063434.1 MGP_WSBEiJ_G0027251.1 mouse_genomes_project 3 162512191 162546442 + MGP_WSBEiJ_P0063434 Depdc1a protein_coding protein_coding MGP_WSBEiJ_T0099443.1 MGP_WSBEiJ_G0038106.1 mouse_genomes_project 3 77994062 77994194 + Gm23440 snoRNA snoRNA MGP_WSBEiJ_T0007439.1 MGP_WSBEiJ_G0006095.1 mouse_genomes_project 3 56366616 56388714 - 1700007F19Rik lincRNA lincRNA MGP_WSBEiJ_T0007601.1 MGP_WSBEiJ_G0006221.1 mouse_genomes_project 3 138923483 138926793 - Gm43357 lincRNA lincRNA MGP_WSBEiJ_T0001190.1 MGP_WSBEiJ_G0001120.1 mouse_genomes_project 3 55839894 55843852 - TEC TEC MGP_WSBEiJ_T0001361.1 MGP_WSBEiJ_G0001290.1 mouse_genomes_project 3 160931511 160934152 - TEC TEC MGP_WSBEiJ_T0097384.1 MGP_WSBEiJ_G0036058.1 mouse_genomes_project 3 146866059 146869246 - Gm43707 sense_intronic sense_intronic MGP_WSBEiJ_T0099437.1 MGP_WSBEiJ_G0038100.1 mouse_genomes_project 3 63461069 63461195 - Gm25222 snoRNA snoRNA MGP_WSBEiJ_T0062341.1 MGP_WSBEiJ_G0027060.1 mouse_genomes_project 3 118791112 118918973 + MGP_WSBEiJ_P0062341 Plppr5 protein_coding protein_coding MGP_WSBEiJ_T0062342.1 MGP_WSBEiJ_G0027060.1 mouse_genomes_project 3 118791503 118918973 + MGP_WSBEiJ_P0062342 Plppr5 protein_coding protein_coding MGP_WSBEiJ_T0001240.1 MGP_WSBEiJ_G0001170.1 mouse_genomes_project 3 97370504 97371693 - TEC TEC MGP_WSBEiJ_T0098218.1 MGP_WSBEiJ_G0036881.1 mouse_genomes_project 3 139058203 139058310 + Gm26107 snRNA snRNA MGP_WSBEiJ_T0063142.1 MGP_WSBEiJ_G0027212.1 mouse_genomes_project 3 149209291 149253542 - MGP_WSBEiJ_P0063142 Samd13 protein_coding protein_coding MGP_WSBEiJ_T0063143.1 MGP_WSBEiJ_G0027212.1 mouse_genomes_project 3 149210188 149250348 - MGP_WSBEiJ_P0063143 Samd13 protein_coding protein_coding MGP_WSBEiJ_T0063144.1 MGP_WSBEiJ_G0027212.1 mouse_genomes_project 3 149210199 149250460 - MGP_WSBEiJ_P0063144 Samd13 protein_coding protein_coding MGP_WSBEiJ_T0063145.1 MGP_WSBEiJ_G0027212.1 mouse_genomes_project 3 149210284 149253425 - MGP_WSBEiJ_P0063145 Samd13 protein_coding protein_coding MGP_WSBEiJ_T0063148.1 MGP_WSBEiJ_G0027212.1 mouse_genomes_project 3 149248393 149253421 - Samd13 protein_coding retained_intron MGP_WSBEiJ_T0010376.1 MGP_WSBEiJ_G0008533.1 mouse_genomes_project 3 123734328 123734447 - Mir760 miRNA miRNA MGP_WSBEiJ_T0013907.1 MGP_WSBEiJ_G0012037.1 mouse_genomes_project 3 126569175 126570187 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017338.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 31603796 31606492 + processed_transcript retained_intron MGP_WSBEiJ_T0017339.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 31603964 32168624 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017340.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 31603984 32206318 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017341.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 31706981 32168699 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017342.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 31707094 32033328 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017343.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32079053 32206142 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017344.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32079106 32208285 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017345.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32079113 32096718 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017346.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32079117 32168662 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017347.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32079441 32079508 + processed_transcript misc_RNA MGP_WSBEiJ_T0017348.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32116996 32206282 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017349.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32167351 32208285 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017350.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32168389 32206185 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017351.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32168467 32211156 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017352.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32168512 32211119 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017353.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32168719 32214117 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017354.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32186294 32206438 + processed_transcript sense_overlapping MGP_WSBEiJ_T0017355.1 MGP_WSBEiJ_G0014921.1 mouse_genomes_project 3 32195548 32208287 + processed_transcript sense_overlapping MGP_WSBEiJ_T0004184.1 MGP_WSBEiJ_G0003682.1 mouse_genomes_project 3 82005802 82073290 + Rbm46os antisense antisense MGP_WSBEiJ_T0004185.1 MGP_WSBEiJ_G0003682.1 mouse_genomes_project 3 82005802 82071372 + Rbm46os antisense antisense MGP_WSBEiJ_T0004186.1 MGP_WSBEiJ_G0003682.1 mouse_genomes_project 3 82005843 82071407 + Rbm46os antisense antisense MGP_WSBEiJ_T0004187.1 MGP_WSBEiJ_G0003682.1 mouse_genomes_project 3 82034512 82073935 + Rbm46os antisense antisense MGP_WSBEiJ_T0007479.1 MGP_WSBEiJ_G0006128.1 mouse_genomes_project 3 84800837 84809915 - Gm42812 lincRNA lincRNA MGP_WSBEiJ_T0062206.1 MGP_WSBEiJ_G0027032.1 mouse_genomes_project 3 110186660 110541147 + MGP_WSBEiJ_P0062206 Vav3 protein_coding protein_coding MGP_WSBEiJ_T0062207.1 MGP_WSBEiJ_G0027032.1 mouse_genomes_project 3 110186690 110423921 + Vav3 protein_coding retained_intron MGP_WSBEiJ_T0062208.1 MGP_WSBEiJ_G0027032.1 mouse_genomes_project 3 110187113 110298413 + Vav3 protein_coding processed_transcript MGP_WSBEiJ_T0062209.1 MGP_WSBEiJ_G0027032.1 mouse_genomes_project 3 110354900 110363810 + Vav3 protein_coding processed_transcript MGP_WSBEiJ_T0062210.1 MGP_WSBEiJ_G0027032.1 mouse_genomes_project 3 110434305 110541143 + MGP_WSBEiJ_P0062210 Vav3 protein_coding protein_coding MGP_WSBEiJ_T0062211.1 MGP_WSBEiJ_G0027032.1 mouse_genomes_project 3 110504151 110538352 + Vav3 protein_coding processed_transcript MGP_WSBEiJ_T0061529.1 MGP_WSBEiJ_G0026870.1 mouse_genomes_project 3 96872288 96908363 - MGP_WSBEiJ_P0061529 Cd160 protein_coding protein_coding MGP_WSBEiJ_T0061530.1 MGP_WSBEiJ_G0026870.1 mouse_genomes_project 3 96872288 96908363 - MGP_WSBEiJ_P0061530 Cd160 protein_coding protein_coding MGP_WSBEiJ_T0061531.1 MGP_WSBEiJ_G0026870.1 mouse_genomes_project 3 96873680 96889813 - MGP_WSBEiJ_P0061531 Cd160 protein_coding protein_coding MGP_WSBEiJ_T0063341.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157544955 157569820 + MGP_WSBEiJ_P0063341 Cryz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063342.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157544955 157569820 + MGP_WSBEiJ_P0063342 Cryz protein_coding protein_coding MGP_WSBEiJ_T0063343.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157544955 157569818 + MGP_WSBEiJ_P0063343 Cryz protein_coding protein_coding MGP_WSBEiJ_T0063344.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157545388 157568805 + MGP_WSBEiJ_P0063344 Cryz protein_coding protein_coding MGP_WSBEiJ_T0063345.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157545441 157558065 + MGP_WSBEiJ_P0063345 Cryz protein_coding protein_coding MGP_WSBEiJ_T0063346.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157545466 157565236 + MGP_WSBEiJ_P0063346 Cryz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063347.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157545602 157557947 + MGP_WSBEiJ_P0063347 Cryz protein_coding protein_coding MGP_WSBEiJ_T0063348.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157545652 157560359 + MGP_WSBEiJ_P0063348 Cryz protein_coding protein_coding MGP_WSBEiJ_T0063349.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157545688 157565136 + MGP_WSBEiJ_P0063349 Cryz protein_coding protein_coding MGP_WSBEiJ_T0063350.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157553926 157568808 + MGP_WSBEiJ_P0063350 Cryz protein_coding protein_coding MGP_WSBEiJ_T0063351.1 MGP_WSBEiJ_G0027238.1 mouse_genomes_project 3 157562392 157565997 + Cryz protein_coding retained_intron MGP_WSBEiJ_T0059224.1 MGP_WSBEiJ_G0026364.1 mouse_genomes_project 3 27998304 28018177 + MGP_WSBEiJ_P0059224 Mynn protein_coding protein_coding MGP_WSBEiJ_T0059225.1 MGP_WSBEiJ_G0026364.1 mouse_genomes_project 3 27998870 28018177 + MGP_WSBEiJ_P0059225 Mynn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059226.1 MGP_WSBEiJ_G0026364.1 mouse_genomes_project 3 27998876 28016658 + MGP_WSBEiJ_P0059226 Mynn protein_coding protein_coding MGP_WSBEiJ_T0059227.1 MGP_WSBEiJ_G0026364.1 mouse_genomes_project 3 27998878 28000400 + Mynn protein_coding retained_intron MGP_WSBEiJ_T0059228.1 MGP_WSBEiJ_G0026364.1 mouse_genomes_project 3 27998883 28016791 + MGP_WSBEiJ_P0059228 Mynn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059229.1 MGP_WSBEiJ_G0026364.1 mouse_genomes_project 3 28011440 28015085 + Mynn protein_coding retained_intron MGP_WSBEiJ_T0100076.1 MGP_WSBEiJ_G0038688.1 mouse_genomes_project 3 94136563 94137260 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100077.1 MGP_WSBEiJ_G0038688.1 mouse_genomes_project 3 94136739 94137502 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0011353.1 MGP_WSBEiJ_G0009510.1 mouse_genomes_project 3 156513389 156513657 + Gm22136 misc_RNA misc_RNA MGP_WSBEiJ_T0007620.1 MGP_WSBEiJ_G0006238.1 mouse_genomes_project 3 145725649 145727781 + 1700001N15Rik lincRNA lincRNA MGP_WSBEiJ_T0061360.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95697807 95703244 - MGP_WSBEiJ_P0061360 Ecm1 protein_coding protein_coding MGP_WSBEiJ_T0061361.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95697808 95703242 - MGP_WSBEiJ_P0061361 Ecm1 protein_coding protein_coding MGP_WSBEiJ_T0061362.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95697809 95698679 - Ecm1 protein_coding retained_intron MGP_WSBEiJ_T0061363.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95699798 95703224 - MGP_WSBEiJ_P0061363 Ecm1 protein_coding protein_coding MGP_WSBEiJ_T0061364.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95699810 95703242 - MGP_WSBEiJ_P0061364 Ecm1 protein_coding protein_coding MGP_WSBEiJ_T0061365.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95699871 95703244 - MGP_WSBEiJ_P0061365 Ecm1 protein_coding protein_coding MGP_WSBEiJ_T0061366.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95700273 95703219 - MGP_WSBEiJ_P0061366 Ecm1 protein_coding protein_coding MGP_WSBEiJ_T0061367.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95700434 95703224 - MGP_WSBEiJ_P0061367 Ecm1 protein_coding protein_coding MGP_WSBEiJ_T0061368.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95701023 95701897 - Ecm1 protein_coding retained_intron MGP_WSBEiJ_T0061369.1 MGP_WSBEiJ_G0026828.1 mouse_genomes_project 3 95701557 95703244 - MGP_WSBEiJ_P0061369 Ecm1 protein_coding protein_coding MGP_WSBEiJ_T0062096.1 MGP_WSBEiJ_G0027008.1 mouse_genomes_project 3 108977147 108985880 - MGP_WSBEiJ_P0062096 Atxn7l2 protein_coding protein_coding MGP_WSBEiJ_T0062097.1 MGP_WSBEiJ_G0027008.1 mouse_genomes_project 3 108977153 108983520 - Atxn7l2 protein_coding retained_intron MGP_WSBEiJ_T0062098.1 MGP_WSBEiJ_G0027008.1 mouse_genomes_project 3 108977284 108985387 - MGP_WSBEiJ_P0062098 Atxn7l2 protein_coding protein_coding MGP_WSBEiJ_T0062099.1 MGP_WSBEiJ_G0027008.1 mouse_genomes_project 3 108982007 108984517 - MGP_WSBEiJ_P0062099 Atxn7l2 protein_coding protein_coding MGP_WSBEiJ_T0062100.1 MGP_WSBEiJ_G0027008.1 mouse_genomes_project 3 108983921 108985414 - Atxn7l2 protein_coding processed_transcript MGP_WSBEiJ_T0013519.1 MGP_WSBEiJ_G0011649.1 mouse_genomes_project 3 1099776 1099993 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097343.1 MGP_WSBEiJ_G0036017.1 mouse_genomes_project 3 101834764 101836953 + Gm42939 sense_intronic sense_intronic MGP_WSBEiJ_T0059754.1 MGP_WSBEiJ_G0026455.1 mouse_genomes_project 3 52876715 52877892 - MGP_WSBEiJ_P0059754 Gm21958 protein_coding protein_coding MGP_WSBEiJ_T0001281.1 MGP_WSBEiJ_G0001211.1 mouse_genomes_project 3 125908590 125908836 - TEC TEC MGP_WSBEiJ_T0004166.1 MGP_WSBEiJ_G0003667.1 mouse_genomes_project 3 54088983 54136311 + Gm43376 antisense antisense MGP_WSBEiJ_T0004167.1 MGP_WSBEiJ_G0003667.1 mouse_genomes_project 3 54089054 54090941 + Gm43376 antisense antisense MGP_WSBEiJ_T0061042.1 MGP_WSBEiJ_G0026741.1 mouse_genomes_project 3 92183204 92184548 + MGP_WSBEiJ_P0061042 Sprr2k protein_coding protein_coding MGP_WSBEiJ_T0062913.1 MGP_WSBEiJ_G0027163.1 mouse_genomes_project 3 140369662 140385801 + MGP_WSBEiJ_P0062913 Adh6a protein_coding protein_coding MGP_WSBEiJ_T0062914.1 MGP_WSBEiJ_G0027163.1 mouse_genomes_project 3 140369662 140386397 + MGP_WSBEiJ_P0062914 Adh6a protein_coding protein_coding MGP_WSBEiJ_T0013876.1 MGP_WSBEiJ_G0012006.1 mouse_genomes_project 3 115628265 115628617 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062087.1 MGP_WSBEiJ_G0027006.1 mouse_genomes_project 3 108960115 108965557 + MGP_WSBEiJ_P0062087 Amigo1 protein_coding protein_coding MGP_WSBEiJ_T0062088.1 MGP_WSBEiJ_G0027006.1 mouse_genomes_project 3 108960130 108965558 + MGP_WSBEiJ_P0062088 Amigo1 protein_coding protein_coding MGP_WSBEiJ_T0062089.1 MGP_WSBEiJ_G0027006.1 mouse_genomes_project 3 108960138 108966067 + MGP_WSBEiJ_P0062089 Amigo1 protein_coding protein_coding MGP_WSBEiJ_T0062090.1 MGP_WSBEiJ_G0027006.1 mouse_genomes_project 3 108961823 108965556 + MGP_WSBEiJ_P0062090 Amigo1 protein_coding protein_coding MGP_WSBEiJ_T0062091.1 MGP_WSBEiJ_G0027006.1 mouse_genomes_project 3 108961881 108965548 + MGP_WSBEiJ_P0062091 Amigo1 protein_coding protein_coding MGP_WSBEiJ_T0013754.1 MGP_WSBEiJ_G0011884.1 mouse_genomes_project 3 76980956 76982366 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059796.1 MGP_WSBEiJ_G0026464.1 mouse_genomes_project 3 53364200 53386178 + MGP_WSBEiJ_P0059796 Sohlh2 protein_coding protein_coding MGP_WSBEiJ_T0013871.1 MGP_WSBEiJ_G0012001.1 mouse_genomes_project 3 114063780 114064177 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007375.1 MGP_WSBEiJ_G0006047.1 mouse_genomes_project 3 31356567 31387163 - 4930431L21Rik lincRNA lincRNA MGP_WSBEiJ_T0007376.1 MGP_WSBEiJ_G0006047.1 mouse_genomes_project 3 31360709 31361703 - 4930431L21Rik lincRNA lincRNA MGP_WSBEiJ_T0013912.1 MGP_WSBEiJ_G0012042.1 mouse_genomes_project 3 130669373 130670693 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004177.1 MGP_WSBEiJ_G0003675.1 mouse_genomes_project 3 63883759 63908250 - A730090N16Rik antisense antisense MGP_WSBEiJ_T0010355.1 MGP_WSBEiJ_G0008512.1 mouse_genomes_project 3 87823719 87823792 - Mir7011 miRNA miRNA MGP_WSBEiJ_T0013662.1 MGP_WSBEiJ_G0011792.1 mouse_genomes_project 3 47620430 47620667 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001214.1 MGP_WSBEiJ_G0001144.1 mouse_genomes_project 3 75501141 75504720 + TEC TEC MGP_WSBEiJ_T0059023.1 MGP_WSBEiJ_G0026324.1 mouse_genomes_project 3 12521119 13026697 - MGP_WSBEiJ_P0059023 protein_coding protein_coding MGP_WSBEiJ_T0059024.1 MGP_WSBEiJ_G0026324.1 mouse_genomes_project 3 12521558 13026649 - MGP_WSBEiJ_P0059024 protein_coding protein_coding MGP_WSBEiJ_T0059027.1 MGP_WSBEiJ_G0026324.1 mouse_genomes_project 3 12532568 12533415 - protein_coding retained_intron MGP_WSBEiJ_T0061904.1 MGP_WSBEiJ_G0026956.1 mouse_genomes_project 3 106309866 106318943 - MGP_WSBEiJ_P0061904 Ddx20 protein_coding protein_coding MGP_WSBEiJ_T0061905.1 MGP_WSBEiJ_G0026956.1 mouse_genomes_project 3 106311216 106318821 - MGP_WSBEiJ_P0061905 Ddx20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061906.1 MGP_WSBEiJ_G0026956.1 mouse_genomes_project 3 106313085 106318813 - Ddx20 protein_coding retained_intron MGP_WSBEiJ_T0062405.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123363349 123384796 + MGP_WSBEiJ_P0062405 Arhgap29 protein_coding protein_coding MGP_WSBEiJ_T0062406.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123364037 123435230 + MGP_WSBEiJ_P0062406 Arhgap29 protein_coding protein_coding MGP_WSBEiJ_T0062407.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123364038 123400331 + MGP_WSBEiJ_P0062407 Arhgap29 protein_coding protein_coding MGP_WSBEiJ_T0062408.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123378695 123404186 + MGP_WSBEiJ_P0062408 Arhgap29 protein_coding protein_coding MGP_WSBEiJ_T0062409.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123378695 123428501 + MGP_WSBEiJ_P0062409 Arhgap29 protein_coding protein_coding MGP_WSBEiJ_T0062410.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123378715 123433452 + MGP_WSBEiJ_P0062410 Arhgap29 protein_coding protein_coding MGP_WSBEiJ_T0062411.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123392907 123404281 + Arhgap29 protein_coding retained_intron MGP_WSBEiJ_T0062412.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123400283 123403955 + Arhgap29 protein_coding retained_intron MGP_WSBEiJ_T0062413.1 MGP_WSBEiJ_G0027072.1 mouse_genomes_project 3 123419689 123424380 + Arhgap29 protein_coding retained_intron MGP_WSBEiJ_T0062383.1 MGP_WSBEiJ_G0027066.1 mouse_genomes_project 3 122648150 122679037 + MGP_WSBEiJ_P0062383 Alg14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062384.1 MGP_WSBEiJ_G0027066.1 mouse_genomes_project 3 122648200 122731618 + MGP_WSBEiJ_P0062384 Alg14 protein_coding protein_coding MGP_WSBEiJ_T0062385.1 MGP_WSBEiJ_G0027066.1 mouse_genomes_project 3 122648242 122679499 + MGP_WSBEiJ_P0062385 Alg14 protein_coding protein_coding MGP_WSBEiJ_T0013940.1 MGP_WSBEiJ_G0012070.1 mouse_genomes_project 3 138299660 138299819 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060850.1 MGP_WSBEiJ_G0026691.1 mouse_genomes_project 3 89389341 89445402 - MGP_WSBEiJ_P0060850 Il6ra protein_coding protein_coding MGP_WSBEiJ_T0060851.1 MGP_WSBEiJ_G0026691.1 mouse_genomes_project 3 89394792 89445368 - MGP_WSBEiJ_P0060851 Il6ra protein_coding protein_coding MGP_WSBEiJ_T0013944.1 MGP_WSBEiJ_G0012074.1 mouse_genomes_project 3 140572106 140572332 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007539.1 MGP_WSBEiJ_G0006171.1 mouse_genomes_project 3 107751511 107766357 + AI504432 lincRNA lincRNA MGP_WSBEiJ_T0098155.1 MGP_WSBEiJ_G0036818.1 mouse_genomes_project 3 43785306 43785424 + Gm23337 snRNA snRNA MGP_WSBEiJ_T0059877.1 MGP_WSBEiJ_G0026483.1 mouse_genomes_project 3 57268697 57367453 + MGP_WSBEiJ_P0059877 Med12l protein_coding protein_coding MGP_WSBEiJ_T0059878.1 MGP_WSBEiJ_G0026483.1 mouse_genomes_project 3 57269359 57596298 + MGP_WSBEiJ_P0059878 Med12l protein_coding protein_coding MGP_WSBEiJ_T0059879.1 MGP_WSBEiJ_G0026483.1 mouse_genomes_project 3 57269850 57596026 + MGP_WSBEiJ_P0059879 Med12l protein_coding protein_coding MGP_WSBEiJ_T0059880.1 MGP_WSBEiJ_G0026483.1 mouse_genomes_project 3 57269850 57596026 + MGP_WSBEiJ_P0059880 Med12l protein_coding protein_coding MGP_WSBEiJ_T0059881.1 MGP_WSBEiJ_G0026483.1 mouse_genomes_project 3 57269850 57366353 + MGP_WSBEiJ_P0059881 Med12l protein_coding protein_coding MGP_WSBEiJ_T0059901.1 MGP_WSBEiJ_G0026483.1 mouse_genomes_project 3 57537364 57593518 + MGP_WSBEiJ_P0059901 Med12l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062127.1 MGP_WSBEiJ_G0027015.1 mouse_genomes_project 3 109215532 109235794 - MGP_WSBEiJ_P0062127 Sars protein_coding protein_coding MGP_WSBEiJ_T0062128.1 MGP_WSBEiJ_G0027015.1 mouse_genomes_project 3 109217279 109235765 - MGP_WSBEiJ_P0062128 Sars protein_coding protein_coding MGP_WSBEiJ_T0062129.1 MGP_WSBEiJ_G0027015.1 mouse_genomes_project 3 109218898 109235739 - MGP_WSBEiJ_P0062129 Sars protein_coding protein_coding MGP_WSBEiJ_T0062130.1 MGP_WSBEiJ_G0027015.1 mouse_genomes_project 3 109220017 109235805 - MGP_WSBEiJ_P0062130 Sars protein_coding protein_coding MGP_WSBEiJ_T0062131.1 MGP_WSBEiJ_G0027015.1 mouse_genomes_project 3 109225042 109235752 - Sars protein_coding retained_intron MGP_WSBEiJ_T0004191.1 MGP_WSBEiJ_G0003686.1 mouse_genomes_project 3 87530736 87538474 - 1700113A16Rik antisense antisense MGP_WSBEiJ_T0004192.1 MGP_WSBEiJ_G0003686.1 mouse_genomes_project 3 87530736 87538381 - 1700113A16Rik antisense antisense MGP_WSBEiJ_T0004193.1 MGP_WSBEiJ_G0003686.1 mouse_genomes_project 3 87531188 87538395 - 1700113A16Rik antisense antisense MGP_WSBEiJ_T0097386.1 MGP_WSBEiJ_G0036060.1 mouse_genomes_project 3 156173000 156175146 - 1700012D16Rik sense_intronic sense_intronic MGP_WSBEiJ_T0062607.1 MGP_WSBEiJ_G0027103.1 mouse_genomes_project 3 129539103 129566355 - MGP_WSBEiJ_P0062607 5730508B09Rik protein_coding protein_coding MGP_WSBEiJ_T0062608.1 MGP_WSBEiJ_G0027103.1 mouse_genomes_project 3 129539725 129566319 - MGP_WSBEiJ_P0062608 5730508B09Rik protein_coding protein_coding MGP_WSBEiJ_T0013561.1 MGP_WSBEiJ_G0011691.1 mouse_genomes_project 3 11783224 11783443 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007373.1 MGP_WSBEiJ_G0006045.1 mouse_genomes_project 3 27946984 27948370 - lincRNA lincRNA MGP_WSBEiJ_T0059631.1 MGP_WSBEiJ_G0026432.1 mouse_genomes_project 3 44269311 44275315 - MGP_WSBEiJ_P0059631 Pabpc4l protein_coding protein_coding MGP_WSBEiJ_T0059632.1 MGP_WSBEiJ_G0026432.1 mouse_genomes_project 3 44269311 44275037 - MGP_WSBEiJ_P0059632 Pabpc4l protein_coding protein_coding MGP_WSBEiJ_T0059633.1 MGP_WSBEiJ_G0026432.1 mouse_genomes_project 3 44273786 44275037 - MGP_WSBEiJ_P0059633 Pabpc4l protein_coding protein_coding MGP_WSBEiJ_T0059634.1 MGP_WSBEiJ_G0026432.1 mouse_genomes_project 3 44274150 44275016 - MGP_WSBEiJ_P0059634 Pabpc4l protein_coding protein_coding MGP_WSBEiJ_T0059080.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17080817 17131950 - MGP_WSBEiJ_P0059080 Hps3 protein_coding protein_coding MGP_WSBEiJ_T0059081.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17080823 17131915 - Hps3 protein_coding retained_intron MGP_WSBEiJ_T0059082.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17085288 17105154 - Hps3 protein_coding processed_transcript MGP_WSBEiJ_T0059083.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17085291 17131937 - MGP_WSBEiJ_P0059083 Hps3 protein_coding protein_coding MGP_WSBEiJ_T0059084.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17093037 17103959 - Hps3 protein_coding processed_transcript MGP_WSBEiJ_T0059085.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17102089 17131937 - Hps3 protein_coding retained_intron MGP_WSBEiJ_T0059086.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17103551 17131929 - Hps3 protein_coding retained_intron MGP_WSBEiJ_T0059087.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17106000 17131937 - Hps3 protein_coding retained_intron MGP_WSBEiJ_T0059088.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17106301 17131931 - Hps3 protein_coding processed_transcript MGP_WSBEiJ_T0059089.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17113011 17131929 - Hps3 protein_coding retained_intron MGP_WSBEiJ_T0059090.1 MGP_WSBEiJ_G0026339.1 mouse_genomes_project 3 17131462 17131937 - Hps3 protein_coding processed_transcript MGP_WSBEiJ_T0061041.1 MGP_WSBEiJ_G0026740.1 mouse_genomes_project 3 92178755 92179562 - MGP_WSBEiJ_P0061041 protein_coding protein_coding MGP_WSBEiJ_T0061526.1 MGP_WSBEiJ_G0026869.1 mouse_genomes_project 3 96793133 96862838 + MGP_WSBEiJ_P0061526 Rnf115 protein_coding protein_coding MGP_WSBEiJ_T0061527.1 MGP_WSBEiJ_G0026869.1 mouse_genomes_project 3 96793141 96863324 + MGP_WSBEiJ_P0061527 Rnf115 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061528.1 MGP_WSBEiJ_G0026869.1 mouse_genomes_project 3 96793308 96855398 + Rnf115 protein_coding processed_transcript MGP_WSBEiJ_T0097503.1 MGP_WSBEiJ_G0036167.1 mouse_genomes_project 3 147900892 147901927 + D530037P16Rik sense_overlapping sense_overlapping MGP_WSBEiJ_T0007618.1 MGP_WSBEiJ_G0006236.1 mouse_genomes_project 3 145636625 145638226 + Gm43613 lincRNA lincRNA MGP_WSBEiJ_T0007584.1 MGP_WSBEiJ_G0006205.1 mouse_genomes_project 3 132655187 132659561 - lincRNA lincRNA MGP_WSBEiJ_T0061421.1 MGP_WSBEiJ_G0026836.1 mouse_genomes_project 3 95877161 95884126 - MGP_WSBEiJ_P0061421 Car14 protein_coding protein_coding MGP_WSBEiJ_T0061422.1 MGP_WSBEiJ_G0026836.1 mouse_genomes_project 3 95879132 95884120 - MGP_WSBEiJ_P0061422 Car14 protein_coding protein_coding MGP_WSBEiJ_T0061423.1 MGP_WSBEiJ_G0026836.1 mouse_genomes_project 3 95880904 95884119 - Car14 protein_coding retained_intron MGP_WSBEiJ_T0061424.1 MGP_WSBEiJ_G0026836.1 mouse_genomes_project 3 95881285 95883183 - Car14 protein_coding retained_intron MGP_WSBEiJ_T0061447.1 MGP_WSBEiJ_G0026841.1 mouse_genomes_project 3 96155996 96165487 + Mtmr11 protein_coding retained_intron MGP_WSBEiJ_T0061448.1 MGP_WSBEiJ_G0026841.1 mouse_genomes_project 3 96155996 96165488 + MGP_WSBEiJ_P0061448 Mtmr11 protein_coding protein_coding MGP_WSBEiJ_T0061449.1 MGP_WSBEiJ_G0026841.1 mouse_genomes_project 3 96156077 96165488 + MGP_WSBEiJ_P0061449 Mtmr11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061450.1 MGP_WSBEiJ_G0026841.1 mouse_genomes_project 3 96156158 96157413 + Mtmr11 protein_coding retained_intron MGP_WSBEiJ_T0061451.1 MGP_WSBEiJ_G0026841.1 mouse_genomes_project 3 96156605 96165488 + Mtmr11 protein_coding processed_transcript MGP_WSBEiJ_T0061452.1 MGP_WSBEiJ_G0026841.1 mouse_genomes_project 3 96162645 96163764 + Mtmr11 protein_coding processed_transcript MGP_WSBEiJ_T0061453.1 MGP_WSBEiJ_G0026841.1 mouse_genomes_project 3 96164355 96165240 + Mtmr11 protein_coding processed_transcript MGP_WSBEiJ_T0059018.1 MGP_WSBEiJ_G0026321.1 mouse_genomes_project 3 11865152 11876226 + MGP_WSBEiJ_P0059018 Car2 protein_coding protein_coding MGP_WSBEiJ_T0059019.1 MGP_WSBEiJ_G0026321.1 mouse_genomes_project 3 11865307 11881862 + MGP_WSBEiJ_P0059019 Car2 protein_coding protein_coding MGP_WSBEiJ_T0059020.1 MGP_WSBEiJ_G0026321.1 mouse_genomes_project 3 11865518 11867446 + Car2 protein_coding retained_intron MGP_WSBEiJ_T0013701.1 MGP_WSBEiJ_G0011831.1 mouse_genomes_project 3 58675463 58676199 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007574.1 MGP_WSBEiJ_G0006197.1 mouse_genomes_project 3 127795497 127797528 + Gm42827 lincRNA lincRNA MGP_WSBEiJ_T0061122.1 MGP_WSBEiJ_G0026789.1 mouse_genomes_project 3 94272475 94283900 - MGP_WSBEiJ_P0061122 Riiad1 protein_coding protein_coding MGP_WSBEiJ_T0061123.1 MGP_WSBEiJ_G0026789.1 mouse_genomes_project 3 94272477 94292012 - Riiad1 protein_coding processed_transcript MGP_WSBEiJ_T0061124.1 MGP_WSBEiJ_G0026789.1 mouse_genomes_project 3 94276834 94283231 - Riiad1 protein_coding processed_transcript MGP_WSBEiJ_T0100782.1 MGP_WSBEiJ_G0039240.1 mouse_genomes_project 3 94080958 94081153 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0060221.1 MGP_WSBEiJ_G0026565.1 mouse_genomes_project 3 81058258 81078768 - MGP_WSBEiJ_P0060221 Tdo2 protein_coding protein_coding MGP_WSBEiJ_T0060222.1 MGP_WSBEiJ_G0026565.1 mouse_genomes_project 3 81059893 81065240 - Tdo2 protein_coding processed_transcript MGP_WSBEiJ_T0060223.1 MGP_WSBEiJ_G0026565.1 mouse_genomes_project 3 81059960 81078768 - MGP_WSBEiJ_P0060223 Tdo2 protein_coding protein_coding MGP_WSBEiJ_T0060224.1 MGP_WSBEiJ_G0026565.1 mouse_genomes_project 3 81062194 81065192 - Tdo2 protein_coding retained_intron MGP_WSBEiJ_T0007404.1 MGP_WSBEiJ_G0006071.1 mouse_genomes_project 3 38808194 38817880 - Gm42784 lincRNA lincRNA MGP_WSBEiJ_T0059499.1 MGP_WSBEiJ_G0026412.1 mouse_genomes_project 3 35017554 35072591 + MGP_WSBEiJ_P0059499 Fgf2 protein_coding protein_coding MGP_WSBEiJ_T0059500.1 MGP_WSBEiJ_G0026412.1 mouse_genomes_project 3 35017861 35077291 + MGP_WSBEiJ_P0059500 Fgf2 protein_coding protein_coding MGP_WSBEiJ_T0059501.1 MGP_WSBEiJ_G0026412.1 mouse_genomes_project 3 35018058 35072015 + MGP_WSBEiJ_P0059501 Fgf2 protein_coding protein_coding MGP_WSBEiJ_T0059502.1 MGP_WSBEiJ_G0026412.1 mouse_genomes_project 3 35039455 35072015 + Fgf2 protein_coding processed_transcript MGP_WSBEiJ_T0059503.1 MGP_WSBEiJ_G0026412.1 mouse_genomes_project 3 35053163 35072015 + Fgf2 protein_coding processed_transcript MGP_WSBEiJ_T0059504.1 MGP_WSBEiJ_G0026412.1 mouse_genomes_project 3 35053259 35072015 + MGP_WSBEiJ_P0059504 Fgf2 protein_coding protein_coding MGP_WSBEiJ_T0059505.1 MGP_WSBEiJ_G0026412.1 mouse_genomes_project 3 35053259 35072015 + MGP_WSBEiJ_P0059505 Fgf2 protein_coding protein_coding MGP_WSBEiJ_T0059506.1 MGP_WSBEiJ_G0026412.1 mouse_genomes_project 3 35071758 35072015 + Fgf2 protein_coding retained_intron MGP_WSBEiJ_T0010364.1 MGP_WSBEiJ_G0008521.1 mouse_genomes_project 3 95060510 95060637 - Mir8099-1 miRNA miRNA MGP_WSBEiJ_T0017395.1 MGP_WSBEiJ_G0014940.1 mouse_genomes_project 3 109167460 109173031 - Gm12522 processed_transcript processed_transcript MGP_WSBEiJ_T0013826.1 MGP_WSBEiJ_G0011956.1 mouse_genomes_project 3 100436955 100437123 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059103.1 MGP_WSBEiJ_G0026343.1 mouse_genomes_project 3 17350490 17380415 - MGP_WSBEiJ_P0059103 Cpb1 protein_coding protein_coding MGP_WSBEiJ_T0059104.1 MGP_WSBEiJ_G0026343.1 mouse_genomes_project 3 17351856 17354559 - Cpb1 protein_coding retained_intron MGP_WSBEiJ_T0059105.1 MGP_WSBEiJ_G0026343.1 mouse_genomes_project 3 17367786 17370047 - Cpb1 protein_coding processed_transcript MGP_WSBEiJ_T0013898.1 MGP_WSBEiJ_G0012028.1 mouse_genomes_project 3 124090288 124090775 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007428.1 MGP_WSBEiJ_G0006087.1 mouse_genomes_project 3 50856340 50865123 - Gm30292 lincRNA lincRNA MGP_WSBEiJ_T0013806.1 MGP_WSBEiJ_G0011936.1 mouse_genomes_project 3 95290224 95290418 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001113.1 MGP_WSBEiJ_G0001045.1 mouse_genomes_project 3 32214130 32214244 + TEC TEC MGP_WSBEiJ_T0013629.1 MGP_WSBEiJ_G0011759.1 mouse_genomes_project 3 36128733 36129565 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007363.1 MGP_WSBEiJ_G0006035.1 mouse_genomes_project 3 18357206 18357925 - Gm29137 lincRNA lincRNA MGP_WSBEiJ_T0010338.1 MGP_WSBEiJ_G0008495.1 mouse_genomes_project 3 32458715 32458822 - Mir6378 miRNA miRNA MGP_WSBEiJ_T0097038.1 MGP_WSBEiJ_G0035719.1 mouse_genomes_project 3 1063530 1063649 + n-R5s194 rRNA rRNA MGP_WSBEiJ_T0001139.1 MGP_WSBEiJ_G0001071.1 mouse_genomes_project 3 43213662 43217632 + TEC TEC MGP_WSBEiJ_T0059940.1 MGP_WSBEiJ_G0026499.1 mouse_genomes_project 3 59737585 59741320 - MGP_WSBEiJ_P0059940 B430305J03Rik protein_coding protein_coding MGP_WSBEiJ_T0013573.1 MGP_WSBEiJ_G0011703.1 mouse_genomes_project 3 15623724 15624923 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097364.1 MGP_WSBEiJ_G0036038.1 mouse_genomes_project 3 104728358 104731635 - Gm43259 sense_intronic sense_intronic MGP_WSBEiJ_T0010377.1 MGP_WSBEiJ_G0008534.1 mouse_genomes_project 3 123995862 123995919 - Mir7657 miRNA miRNA MGP_WSBEiJ_T0098207.1 MGP_WSBEiJ_G0036870.1 mouse_genomes_project 3 110726963 110727069 + Gm25681 snRNA snRNA MGP_WSBEiJ_T0007330.1 MGP_WSBEiJ_G0006015.1 mouse_genomes_project 3 1830419 1834966 + Gm17308 lincRNA lincRNA MGP_WSBEiJ_T0059064.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17039452 17076792 + MGP_WSBEiJ_P0059064 Cp protein_coding protein_coding MGP_WSBEiJ_T0059065.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17039452 17098752 + MGP_WSBEiJ_P0059065 Cp protein_coding protein_coding MGP_WSBEiJ_T0059066.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17039459 17051719 + Cp protein_coding retained_intron MGP_WSBEiJ_T0059067.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17039467 17100319 + MGP_WSBEiJ_P0059067 Cp protein_coding protein_coding MGP_WSBEiJ_T0059068.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17039509 17098752 + MGP_WSBEiJ_P0059068 Cp protein_coding protein_coding MGP_WSBEiJ_T0059069.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17039617 17051387 + Cp protein_coding retained_intron MGP_WSBEiJ_T0059070.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17039682 17076180 + MGP_WSBEiJ_P0059070 Cp protein_coding protein_coding MGP_WSBEiJ_T0059071.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17052223 17072639 + Cp protein_coding retained_intron MGP_WSBEiJ_T0059072.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17053266 17058600 + Cp protein_coding retained_intron MGP_WSBEiJ_T0059073.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17058306 17064268 + Cp protein_coding retained_intron MGP_WSBEiJ_T0059074.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17064154 17070965 + MGP_WSBEiJ_P0059074 Cp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059075.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17064971 17067040 + Cp protein_coding retained_intron MGP_WSBEiJ_T0059076.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17065544 17069440 + MGP_WSBEiJ_P0059076 Cp protein_coding protein_coding MGP_WSBEiJ_T0059077.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17069148 17076237 + MGP_WSBEiJ_P0059077 Cp protein_coding protein_coding MGP_WSBEiJ_T0059078.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17071113 17073201 + Cp protein_coding retained_intron MGP_WSBEiJ_T0059079.1 MGP_WSBEiJ_G0026338.1 mouse_genomes_project 3 17072725 17097510 + MGP_WSBEiJ_P0059079 Cp protein_coding protein_coding MGP_WSBEiJ_T0100795.1 MGP_WSBEiJ_G0039253.1 mouse_genomes_project 3 99158466 99173462 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004216.1 MGP_WSBEiJ_G0003704.1 mouse_genomes_project 3 95242667 95251651 - 6330562C20Rik antisense antisense MGP_WSBEiJ_T0004217.1 MGP_WSBEiJ_G0003704.1 mouse_genomes_project 3 95243252 95251700 - 6330562C20Rik antisense antisense MGP_WSBEiJ_T0004218.1 MGP_WSBEiJ_G0003704.1 mouse_genomes_project 3 95247962 95251710 - 6330562C20Rik antisense antisense MGP_WSBEiJ_T0013888.1 MGP_WSBEiJ_G0012018.1 mouse_genomes_project 3 119134120 119134562 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004131.1 MGP_WSBEiJ_G0003642.1 mouse_genomes_project 3 28195727 28196698 - 4933429H19Rik antisense antisense MGP_WSBEiJ_T0004132.1 MGP_WSBEiJ_G0003642.1 mouse_genomes_project 3 28196271 28196694 - 4933429H19Rik antisense antisense MGP_WSBEiJ_T0004209.1 MGP_WSBEiJ_G0003699.1 mouse_genomes_project 3 94196983 94207037 - Gm43401 antisense antisense MGP_WSBEiJ_T0013868.1 MGP_WSBEiJ_G0011998.1 mouse_genomes_project 3 113288926 113290759 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062101.1 MGP_WSBEiJ_G0027009.1 mouse_genomes_project 3 108986417 109001586 - MGP_WSBEiJ_P0062101 Sypl2 protein_coding protein_coding MGP_WSBEiJ_T0062102.1 MGP_WSBEiJ_G0027009.1 mouse_genomes_project 3 108992246 109001581 - Sypl2 protein_coding retained_intron MGP_WSBEiJ_T0007533.1 MGP_WSBEiJ_G0006167.1 mouse_genomes_project 3 105248482 105251279 - Gm29561 lincRNA lincRNA MGP_WSBEiJ_T0010361.1 MGP_WSBEiJ_G0008518.1 mouse_genomes_project 3 93171521 93172719 + miRNA miRNA MGP_WSBEiJ_T0061682.1 MGP_WSBEiJ_G0026913.1 mouse_genomes_project 3 102014712 102043212 - MGP_WSBEiJ_P0061682 Atp1a1 protein_coding protein_coding MGP_WSBEiJ_T0061683.1 MGP_WSBEiJ_G0026913.1 mouse_genomes_project 3 102014809 102016050 - Atp1a1 protein_coding retained_intron MGP_WSBEiJ_T0061684.1 MGP_WSBEiJ_G0026913.1 mouse_genomes_project 3 102024277 102027522 - Atp1a1 protein_coding retained_intron MGP_WSBEiJ_T0100760.1 MGP_WSBEiJ_G0039218.1 mouse_genomes_project 3 62568165 62998738 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001116.1 MGP_WSBEiJ_G0001048.1 mouse_genomes_project 3 33573577 33576226 - TEC TEC MGP_WSBEiJ_T0013690.1 MGP_WSBEiJ_G0011820.1 mouse_genomes_project 3 56180787 56181963 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001085.1 MGP_WSBEiJ_G0001017.1 mouse_genomes_project 3 17513686 17513932 + TEC TEC MGP_WSBEiJ_T0001121.1 MGP_WSBEiJ_G0001053.1 mouse_genomes_project 3 35310463 35312537 - TEC TEC MGP_WSBEiJ_T0013862.1 MGP_WSBEiJ_G0011992.1 mouse_genomes_project 3 111262382 111263025 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060920.1 MGP_WSBEiJ_G0026697.1 mouse_genomes_project 3 89657970 89783863 + MGP_WSBEiJ_P0060920 Nup210l protein_coding protein_coding MGP_WSBEiJ_T0060921.1 MGP_WSBEiJ_G0026697.1 mouse_genomes_project 3 89657972 89783894 + MGP_WSBEiJ_P0060921 Nup210l protein_coding protein_coding MGP_WSBEiJ_T0061214.1 MGP_WSBEiJ_G0026801.1 mouse_genomes_project 3 94947714 94957522 - MGP_WSBEiJ_P0061214 Psmd4 protein_coding protein_coding MGP_WSBEiJ_T0061215.1 MGP_WSBEiJ_G0026801.1 mouse_genomes_project 3 94947717 94957460 - MGP_WSBEiJ_P0061215 Psmd4 protein_coding protein_coding MGP_WSBEiJ_T0061216.1 MGP_WSBEiJ_G0026801.1 mouse_genomes_project 3 94947724 94950285 - MGP_WSBEiJ_P0061216 Psmd4 protein_coding protein_coding MGP_WSBEiJ_T0061217.1 MGP_WSBEiJ_G0026801.1 mouse_genomes_project 3 94947725 94957456 - Psmd4 protein_coding retained_intron MGP_WSBEiJ_T0061218.1 MGP_WSBEiJ_G0026801.1 mouse_genomes_project 3 94947725 94957451 - MGP_WSBEiJ_P0061218 Psmd4 protein_coding protein_coding MGP_WSBEiJ_T0061219.1 MGP_WSBEiJ_G0026801.1 mouse_genomes_project 3 94947943 94957453 - Psmd4 protein_coding retained_intron MGP_WSBEiJ_T0061220.1 MGP_WSBEiJ_G0026801.1 mouse_genomes_project 3 94947948 94948934 - Psmd4 protein_coding retained_intron MGP_WSBEiJ_T0061221.1 MGP_WSBEiJ_G0026801.1 mouse_genomes_project 3 94950840 94957458 - Psmd4 protein_coding processed_transcript MGP_WSBEiJ_T0059386.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33345946 33347856 + Atp11b protein_coding retained_intron MGP_WSBEiJ_T0059387.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33345974 33428101 + Atp11b protein_coding processed_transcript MGP_WSBEiJ_T0059388.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33345974 33455436 + Atp11b protein_coding retained_intron MGP_WSBEiJ_T0059389.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33345974 33455441 + MGP_WSBEiJ_P0059389 Atp11b protein_coding protein_coding MGP_WSBEiJ_T0059390.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33382485 33401929 + MGP_WSBEiJ_P0059390 Atp11b protein_coding protein_coding MGP_WSBEiJ_T0059391.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33383976 33455439 + MGP_WSBEiJ_P0059391 Atp11b protein_coding protein_coding MGP_WSBEiJ_T0059392.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33402802 33405239 + Atp11b protein_coding processed_transcript MGP_WSBEiJ_T0059393.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33424111 33427602 + Atp11b protein_coding retained_intron MGP_WSBEiJ_T0059394.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33429777 33436788 + MGP_WSBEiJ_P0059394 Atp11b protein_coding unknown_likely_coding MGP_WSBEiJ_T0059395.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33437915 33455436 + Atp11b protein_coding retained_intron MGP_WSBEiJ_T0059396.1 MGP_WSBEiJ_G0026393.1 mouse_genomes_project 3 33438248 33455441 + MGP_WSBEiJ_P0059396 Atp11b protein_coding protein_coding MGP_WSBEiJ_T0061532.1 MGP_WSBEiJ_G0026871.1 mouse_genomes_project 3 96908295 96928577 + MGP_WSBEiJ_P0061532 Pdzk1 protein_coding protein_coding MGP_WSBEiJ_T0061533.1 MGP_WSBEiJ_G0026871.1 mouse_genomes_project 3 96908474 96928662 + MGP_WSBEiJ_P0061533 Pdzk1 protein_coding protein_coding MGP_WSBEiJ_T0061534.1 MGP_WSBEiJ_G0026871.1 mouse_genomes_project 3 96909087 96949545 + MGP_WSBEiJ_P0061534 Pdzk1 protein_coding protein_coding MGP_WSBEiJ_T0061535.1 MGP_WSBEiJ_G0026871.1 mouse_genomes_project 3 96911165 96949365 + MGP_WSBEiJ_P0061535 Pdzk1 protein_coding protein_coding MGP_WSBEiJ_T0061536.1 MGP_WSBEiJ_G0026871.1 mouse_genomes_project 3 96911182 96949091 + MGP_WSBEiJ_P0061536 Pdzk1 protein_coding protein_coding MGP_WSBEiJ_T0061537.1 MGP_WSBEiJ_G0026871.1 mouse_genomes_project 3 96911182 96949215 + MGP_WSBEiJ_P0061537 Pdzk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061538.1 MGP_WSBEiJ_G0026871.1 mouse_genomes_project 3 96912528 96927301 + MGP_WSBEiJ_P0061538 Pdzk1 protein_coding protein_coding MGP_WSBEiJ_T0062194.1 MGP_WSBEiJ_G0027028.1 mouse_genomes_project 3 109762119 109762512 - MGP_WSBEiJ_P0062194 Gm9857 protein_coding protein_coding MGP_WSBEiJ_T0061673.1 MGP_WSBEiJ_G0026910.1 mouse_genomes_project 3 101439756 101511983 - MGP_WSBEiJ_P0061673 Ptgfrn protein_coding protein_coding MGP_WSBEiJ_T0061674.1 MGP_WSBEiJ_G0026910.1 mouse_genomes_project 3 101461259 101473730 - Ptgfrn protein_coding processed_transcript MGP_WSBEiJ_T0061675.1 MGP_WSBEiJ_G0026910.1 mouse_genomes_project 3 101474217 101478998 - Ptgfrn protein_coding retained_intron MGP_WSBEiJ_T0013968.1 MGP_WSBEiJ_G0012098.1 mouse_genomes_project 3 148238452 148238892 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061838.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104517974 104558923 + MGP_WSBEiJ_P0061838 Phtf1 protein_coding protein_coding MGP_WSBEiJ_T0061839.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104518122 104558923 + MGP_WSBEiJ_P0061839 Phtf1 protein_coding protein_coding MGP_WSBEiJ_T0061840.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104518230 104576470 + MGP_WSBEiJ_P0061840 Phtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061841.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104518232 104558925 + MGP_WSBEiJ_P0061841 Phtf1 protein_coding protein_coding MGP_WSBEiJ_T0061842.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104518236 104558923 + Phtf1 protein_coding retained_intron MGP_WSBEiJ_T0061843.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104518238 104540550 + MGP_WSBEiJ_P0061843 Phtf1 protein_coding protein_coding MGP_WSBEiJ_T0061844.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104518310 104558925 + MGP_WSBEiJ_P0061844 Phtf1 protein_coding protein_coding MGP_WSBEiJ_T0061845.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104518452 104536985 + MGP_WSBEiJ_P0061845 Phtf1 protein_coding protein_coding MGP_WSBEiJ_T0061846.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104518789 104548955 + MGP_WSBEiJ_P0061846 Phtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061847.1 MGP_WSBEiJ_G0026942.1 mouse_genomes_project 3 104547853 104548999 + Phtf1 protein_coding retained_intron MGP_WSBEiJ_T0007593.1 MGP_WSBEiJ_G0006214.1 mouse_genomes_project 3 135642945 135646430 - lincRNA lincRNA MGP_WSBEiJ_T0059108.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19186759 19333310 + MGP_WSBEiJ_P0059108 Tbl1xr1 protein_coding protein_coding MGP_WSBEiJ_T0059109.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19186834 19329402 + MGP_WSBEiJ_P0059109 Tbl1xr1 protein_coding protein_coding MGP_WSBEiJ_T0059110.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19186863 19305122 + Tbl1xr1 protein_coding processed_transcript MGP_WSBEiJ_T0059111.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19186939 19307538 + MGP_WSBEiJ_P0059111 Tbl1xr1 protein_coding protein_coding MGP_WSBEiJ_T0059112.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19186988 19306409 + Tbl1xr1 protein_coding processed_transcript MGP_WSBEiJ_T0059113.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19187043 19305090 + MGP_WSBEiJ_P0059113 Tbl1xr1 protein_coding protein_coding MGP_WSBEiJ_T0059114.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19187392 19331951 + MGP_WSBEiJ_P0059114 Tbl1xr1 protein_coding protein_coding MGP_WSBEiJ_T0059115.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19227491 19328619 + MGP_WSBEiJ_P0059115 Tbl1xr1 protein_coding protein_coding MGP_WSBEiJ_T0059116.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19252304 19306402 + MGP_WSBEiJ_P0059116 Tbl1xr1 protein_coding protein_coding MGP_WSBEiJ_T0059117.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19263102 19329726 + MGP_WSBEiJ_P0059117 Tbl1xr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059118.1 MGP_WSBEiJ_G0026345.1 mouse_genomes_project 3 19319841 19327230 + MGP_WSBEiJ_P0059118 Tbl1xr1 protein_coding protein_coding MGP_WSBEiJ_T0011332.1 MGP_WSBEiJ_G0009489.1 mouse_genomes_project 3 16422028 16422340 + Gm22282 misc_RNA misc_RNA MGP_WSBEiJ_T0013908.1 MGP_WSBEiJ_G0012038.1 mouse_genomes_project 3 127847765 127849011 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062248.1 MGP_WSBEiJ_G0027040.1 mouse_genomes_project 3 116827499 116832153 - MGP_WSBEiJ_P0062248 S1pr1 protein_coding protein_coding MGP_WSBEiJ_T0059187.1 MGP_WSBEiJ_G0026359.1 mouse_genomes_project 3 26073123 26091411 + MGP_WSBEiJ_P0059187 Eif5a2 protein_coding protein_coding MGP_WSBEiJ_T0097387.1 MGP_WSBEiJ_G0036061.1 mouse_genomes_project 3 156354386 156365930 - 1700015C17Rik sense_intronic sense_intronic MGP_WSBEiJ_T0010362.1 MGP_WSBEiJ_G0008519.1 mouse_genomes_project 3 93218371 93218480 - Gm22752 miRNA miRNA MGP_WSBEiJ_T0007358.1 MGP_WSBEiJ_G0006031.1 mouse_genomes_project 3 15396232 15514837 - lincRNA lincRNA MGP_WSBEiJ_T0059507.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35072127 35086755 - MGP_WSBEiJ_P0059507 Nudt6 protein_coding protein_coding MGP_WSBEiJ_T0059508.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35072127 35086771 - MGP_WSBEiJ_P0059508 Nudt6 protein_coding protein_coding MGP_WSBEiJ_T0059509.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35072127 35087371 - MGP_WSBEiJ_P0059509 Nudt6 protein_coding protein_coding MGP_WSBEiJ_T0059510.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35072127 35086755 - MGP_WSBEiJ_P0059510 Nudt6 protein_coding protein_coding MGP_WSBEiJ_T0059511.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35072199 35087396 - MGP_WSBEiJ_P0059511 Nudt6 protein_coding protein_coding MGP_WSBEiJ_T0059512.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35072203 35086765 - MGP_WSBEiJ_P0059512 Nudt6 protein_coding protein_coding MGP_WSBEiJ_T0059513.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35072292 35077858 - Nudt6 protein_coding processed_transcript MGP_WSBEiJ_T0059514.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35072569 35086748 - MGP_WSBEiJ_P0059514 Nudt6 protein_coding protein_coding MGP_WSBEiJ_T0059515.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35076688 35086732 - MGP_WSBEiJ_P0059515 Nudt6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059516.1 MGP_WSBEiJ_G0026413.1 mouse_genomes_project 3 35079574 35086741 - MGP_WSBEiJ_P0059516 Nudt6 protein_coding protein_coding MGP_WSBEiJ_T0013858.1 MGP_WSBEiJ_G0011988.1 mouse_genomes_project 3 109402850 109403275 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007444.1 MGP_WSBEiJ_G0006098.1 mouse_genomes_project 3 61869973 61884944 + Gm34240 lincRNA lincRNA MGP_WSBEiJ_T0001295.1 MGP_WSBEiJ_G0001225.1 mouse_genomes_project 3 128663203 128666272 - TEC TEC MGP_WSBEiJ_T0004159.1 MGP_WSBEiJ_G0003662.1 mouse_genomes_project 3 51105898 51109070 - Gm42901 antisense antisense MGP_WSBEiJ_T0100763.1 MGP_WSBEiJ_G0039221.1 mouse_genomes_project 3 63465781 63466357 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013785.1 MGP_WSBEiJ_G0011915.1 mouse_genomes_project 3 90269017 90269170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061434.1 MGP_WSBEiJ_G0026838.1 mouse_genomes_project 3 95978197 95985007 - MGP_WSBEiJ_P0061434 Plekho1 protein_coding protein_coding MGP_WSBEiJ_T0061435.1 MGP_WSBEiJ_G0026838.1 mouse_genomes_project 3 95978222 95988592 - MGP_WSBEiJ_P0061435 Plekho1 protein_coding protein_coding MGP_WSBEiJ_T0061436.1 MGP_WSBEiJ_G0026838.1 mouse_genomes_project 3 95978775 95985061 - MGP_WSBEiJ_P0061436 Plekho1 protein_coding protein_coding MGP_WSBEiJ_T0061437.1 MGP_WSBEiJ_G0026838.1 mouse_genomes_project 3 95984673 95985007 - Plekho1 protein_coding retained_intron MGP_WSBEiJ_T0097375.1 MGP_WSBEiJ_G0036049.1 mouse_genomes_project 3 106125833 106127773 + Gm43847 sense_intronic sense_intronic MGP_WSBEiJ_T0059353.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282100 31302723 + MGP_WSBEiJ_P0059353 protein_coding protein_coding MGP_WSBEiJ_T0059354.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282443 31283139 + protein_coding retained_intron MGP_WSBEiJ_T0059355.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282451 31284019 + protein_coding retained_intron MGP_WSBEiJ_T0059356.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282459 31286436 + MGP_WSBEiJ_P0059356 protein_coding protein_coding MGP_WSBEiJ_T0059357.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282459 31291758 + MGP_WSBEiJ_P0059357 protein_coding protein_coding MGP_WSBEiJ_T0059358.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282478 31291612 + MGP_WSBEiJ_P0059358 protein_coding protein_coding MGP_WSBEiJ_T0059359.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282481 31300153 + MGP_WSBEiJ_P0059359 protein_coding protein_coding MGP_WSBEiJ_T0059360.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282481 31295903 + MGP_WSBEiJ_P0059360 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059361.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282519 31296135 + MGP_WSBEiJ_P0059361 protein_coding protein_coding MGP_WSBEiJ_T0059362.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31282531 31291210 + MGP_WSBEiJ_P0059362 protein_coding protein_coding MGP_WSBEiJ_T0059363.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31283741 31291744 + MGP_WSBEiJ_P0059363 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059364.1 MGP_WSBEiJ_G0026388.1 mouse_genomes_project 3 31286041 31286617 + protein_coding retained_intron MGP_WSBEiJ_T0062662.1 MGP_WSBEiJ_G0027114.1 mouse_genomes_project 3 131690839 131753233 - MGP_WSBEiJ_P0062662 Ccdc109b protein_coding protein_coding MGP_WSBEiJ_T0062663.1 MGP_WSBEiJ_G0027114.1 mouse_genomes_project 3 131690854 131753075 - MGP_WSBEiJ_P0062663 Ccdc109b protein_coding protein_coding MGP_WSBEiJ_T0062664.1 MGP_WSBEiJ_G0027114.1 mouse_genomes_project 3 131692962 131753016 - MGP_WSBEiJ_P0062664 Ccdc109b protein_coding protein_coding MGP_WSBEiJ_T0062665.1 MGP_WSBEiJ_G0027114.1 mouse_genomes_project 3 131704004 131753151 - MGP_WSBEiJ_P0062665 Ccdc109b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062626.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131435639 131519492 - MGP_WSBEiJ_P0062626 Egf protein_coding protein_coding MGP_WSBEiJ_T0062627.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131435652 131485990 - MGP_WSBEiJ_P0062627 Egf protein_coding protein_coding MGP_WSBEiJ_T0062628.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131435654 131485980 - MGP_WSBEiJ_P0062628 Egf protein_coding protein_coding MGP_WSBEiJ_T0062629.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131436411 131439633 - Egf protein_coding retained_intron MGP_WSBEiJ_T0062630.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131444359 131452695 - Egf protein_coding retained_intron MGP_WSBEiJ_T0062631.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131451976 131454886 - Egf protein_coding retained_intron MGP_WSBEiJ_T0062632.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131459069 131485989 - MGP_WSBEiJ_P0062632 Egf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062633.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131497202 131519492 - Egf protein_coding retained_intron MGP_WSBEiJ_T0062634.1 MGP_WSBEiJ_G0027107.1 mouse_genomes_project 3 131498650 131519492 - Egf protein_coding processed_transcript MGP_WSBEiJ_T0060348.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86073477 86216496 - MGP_WSBEiJ_P0060348 Dclk2 protein_coding protein_coding MGP_WSBEiJ_T0060349.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86073479 86216969 - MGP_WSBEiJ_P0060349 Dclk2 protein_coding protein_coding MGP_WSBEiJ_T0060350.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86073479 86216305 - MGP_WSBEiJ_P0060350 Dclk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060351.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86073485 86216452 - MGP_WSBEiJ_P0060351 Dclk2 protein_coding protein_coding MGP_WSBEiJ_T0060352.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86074538 86216287 - MGP_WSBEiJ_P0060352 Dclk2 protein_coding protein_coding MGP_WSBEiJ_T0060353.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86074567 86079642 - Dclk2 protein_coding processed_transcript MGP_WSBEiJ_T0060354.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86074675 86086491 - Dclk2 protein_coding processed_transcript MGP_WSBEiJ_T0060355.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86076672 86085343 - Dclk2 protein_coding processed_transcript MGP_WSBEiJ_T0060356.1 MGP_WSBEiJ_G0026598.1 mouse_genomes_project 3 86086251 86216491 - MGP_WSBEiJ_P0060356 Dclk2 protein_coding protein_coding MGP_WSBEiJ_T0062658.1 MGP_WSBEiJ_G0027113.1 mouse_genomes_project 3 131676050 131690004 + MGP_WSBEiJ_P0062658 Casp6 protein_coding protein_coding MGP_WSBEiJ_T0062659.1 MGP_WSBEiJ_G0027113.1 mouse_genomes_project 3 131676083 131684644 + Casp6 protein_coding processed_transcript MGP_WSBEiJ_T0062660.1 MGP_WSBEiJ_G0027113.1 mouse_genomes_project 3 131676126 131680059 + Casp6 protein_coding retained_intron MGP_WSBEiJ_T0062661.1 MGP_WSBEiJ_G0027113.1 mouse_genomes_project 3 131686361 131689502 + Casp6 protein_coding retained_intron MGP_WSBEiJ_T0004173.1 MGP_WSBEiJ_G0003673.1 mouse_genomes_project 3 62413719 62418784 + Gm26850 antisense antisense MGP_WSBEiJ_T0004174.1 MGP_WSBEiJ_G0003673.1 mouse_genomes_project 3 62413721 62415537 + Gm26850 antisense antisense MGP_WSBEiJ_T0001078.1 MGP_WSBEiJ_G0001010.1 mouse_genomes_project 3 7230457 7230787 + TEC TEC MGP_WSBEiJ_T0062956.1 MGP_WSBEiJ_G0027172.1 mouse_genomes_project 3 143660674 144032342 + MGP_WSBEiJ_P0062956 Unc5c protein_coding protein_coding MGP_WSBEiJ_T0062957.1 MGP_WSBEiJ_G0027172.1 mouse_genomes_project 3 143661032 144026881 + MGP_WSBEiJ_P0062957 Unc5c protein_coding protein_coding MGP_WSBEiJ_T0062958.1 MGP_WSBEiJ_G0027172.1 mouse_genomes_project 3 143661057 143860451 + Unc5c protein_coding processed_transcript MGP_WSBEiJ_T0062959.1 MGP_WSBEiJ_G0027172.1 mouse_genomes_project 3 143661057 143666374 + Unc5c protein_coding retained_intron MGP_WSBEiJ_T0062960.1 MGP_WSBEiJ_G0027172.1 mouse_genomes_project 3 143661057 143882010 + Unc5c protein_coding retained_intron MGP_WSBEiJ_T0062961.1 MGP_WSBEiJ_G0027172.1 mouse_genomes_project 3 143661057 144026833 + MGP_WSBEiJ_P0062961 Unc5c protein_coding protein_coding MGP_WSBEiJ_T0062962.1 MGP_WSBEiJ_G0027172.1 mouse_genomes_project 3 143661129 144027950 + MGP_WSBEiJ_P0062962 Unc5c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062963.1 MGP_WSBEiJ_G0027172.1 mouse_genomes_project 3 143986357 143989418 + Unc5c protein_coding retained_intron MGP_WSBEiJ_T0013933.1 MGP_WSBEiJ_G0012063.1 mouse_genomes_project 3 137084576 137085001 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060260.1 MGP_WSBEiJ_G0026577.1 mouse_genomes_project 3 82257077 82489497 + MGP_WSBEiJ_P0060260 Dchs2 protein_coding protein_coding MGP_WSBEiJ_T0062353.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121055992 121124434 - MGP_WSBEiJ_P0062353 Ptbp2 protein_coding protein_coding MGP_WSBEiJ_T0062354.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121055992 121124018 - MGP_WSBEiJ_P0062354 Ptbp2 protein_coding protein_coding MGP_WSBEiJ_T0062355.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121057570 121123864 - MGP_WSBEiJ_P0062355 Ptbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062356.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121057595 121063402 - MGP_WSBEiJ_P0062356 Ptbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062357.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121057634 121078941 - Ptbp2 protein_coding retained_intron MGP_WSBEiJ_T0062358.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121058059 121061649 - Ptbp2 protein_coding retained_intron MGP_WSBEiJ_T0062359.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121061368 121078572 - MGP_WSBEiJ_P0062359 Ptbp2 protein_coding protein_coding MGP_WSBEiJ_T0062360.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121076783 121080830 - Ptbp2 protein_coding retained_intron MGP_WSBEiJ_T0062361.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121084696 121123916 - MGP_WSBEiJ_P0062361 Ptbp2 protein_coding protein_coding MGP_WSBEiJ_T0062362.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121085972 121125094 - Ptbp2 protein_coding processed_transcript MGP_WSBEiJ_T0062363.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121099379 121125096 - Ptbp2 protein_coding processed_transcript MGP_WSBEiJ_T0062364.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121099384 121124321 - Ptbp2 protein_coding processed_transcript MGP_WSBEiJ_T0062365.1 MGP_WSBEiJ_G0027063.1 mouse_genomes_project 3 121099386 121123937 - MGP_WSBEiJ_P0062365 Ptbp2 protein_coding protein_coding MGP_WSBEiJ_T0004196.1 MGP_WSBEiJ_G0003689.1 mouse_genomes_project 3 88268479 88352779 - antisense antisense MGP_WSBEiJ_T0060160.1 MGP_WSBEiJ_G0026552.1 mouse_genomes_project 3 78125435 78193841 - protein_coding retained_intron MGP_WSBEiJ_T0060161.1 MGP_WSBEiJ_G0026552.1 mouse_genomes_project 3 78128717 78319595 - MGP_WSBEiJ_P0060161 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060162.1 MGP_WSBEiJ_G0026552.1 mouse_genomes_project 3 78128727 78193943 - protein_coding processed_transcript MGP_WSBEiJ_T0060163.1 MGP_WSBEiJ_G0026552.1 mouse_genomes_project 3 78189641 78201981 - protein_coding retained_intron MGP_WSBEiJ_T0001304.1 MGP_WSBEiJ_G0001234.1 mouse_genomes_project 3 129496923 129500338 - TEC TEC MGP_WSBEiJ_T0059119.1 MGP_WSBEiJ_G0026346.1 mouse_genomes_project 3 20865065 21903992 - MGP_WSBEiJ_P0059119 Naaladl2 protein_coding protein_coding MGP_WSBEiJ_T0059120.1 MGP_WSBEiJ_G0026346.1 mouse_genomes_project 3 20871688 21010552 - Naaladl2 protein_coding processed_transcript MGP_WSBEiJ_T0059121.1 MGP_WSBEiJ_G0026346.1 mouse_genomes_project 3 20872318 21041012 - Naaladl2 protein_coding processed_transcript MGP_WSBEiJ_T0059122.1 MGP_WSBEiJ_G0026346.1 mouse_genomes_project 3 21649603 22275110 - Naaladl2 protein_coding retained_intron MGP_WSBEiJ_T0001236.1 MGP_WSBEiJ_G0001166.1 mouse_genomes_project 3 96505148 96508001 - TEC TEC MGP_WSBEiJ_T0062347.1 MGP_WSBEiJ_G0027062.1 mouse_genomes_project 3 119842532 120751519 + MGP_WSBEiJ_P0062347 Dpyd protein_coding protein_coding MGP_WSBEiJ_T0062348.1 MGP_WSBEiJ_G0027062.1 mouse_genomes_project 3 119842533 120085382 + Dpyd protein_coding retained_intron MGP_WSBEiJ_T0062349.1 MGP_WSBEiJ_G0027062.1 mouse_genomes_project 3 119842580 120065703 + Dpyd protein_coding retained_intron MGP_WSBEiJ_T0062350.1 MGP_WSBEiJ_G0027062.1 mouse_genomes_project 3 119842583 119958195 + MGP_WSBEiJ_P0062350 Dpyd protein_coding protein_coding MGP_WSBEiJ_T0062351.1 MGP_WSBEiJ_G0027062.1 mouse_genomes_project 3 119842589 119843556 + Dpyd protein_coding retained_intron MGP_WSBEiJ_T0062352.1 MGP_WSBEiJ_G0027062.1 mouse_genomes_project 3 120099654 120193761 + Dpyd protein_coding retained_intron MGP_WSBEiJ_T0059230.1 MGP_WSBEiJ_G0026365.1 mouse_genomes_project 3 28022564 28047176 - MGP_WSBEiJ_P0059230 Lrrc34 protein_coding protein_coding MGP_WSBEiJ_T0013708.1 MGP_WSBEiJ_G0011838.1 mouse_genomes_project 3 61162695 61163277 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059915.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58808639 58940638 + MGP_WSBEiJ_P0059915 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059916.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58808851 58949229 + MGP_WSBEiJ_P0059916 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059917.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58808877 58811303 + Mbnl1 protein_coding retained_intron MGP_WSBEiJ_T0059918.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58808883 58967222 + MGP_WSBEiJ_P0059918 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059919.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58808886 58940623 + MGP_WSBEiJ_P0059919 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059920.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58833018 58891362 + Mbnl1 protein_coding processed_transcript MGP_WSBEiJ_T0059921.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58833262 58976367 + MGP_WSBEiJ_P0059921 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059922.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58833303 58943429 + Mbnl1 protein_coding retained_intron MGP_WSBEiJ_T0059923.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58833320 58973291 + Mbnl1 protein_coding processed_transcript MGP_WSBEiJ_T0059924.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58833348 58891340 + Mbnl1 protein_coding processed_transcript MGP_WSBEiJ_T0059925.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58833348 58863896 + Mbnl1 protein_coding retained_intron MGP_WSBEiJ_T0059926.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58860401 58861362 + Mbnl1 protein_coding processed_transcript MGP_WSBEiJ_T0059927.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58860492 58975135 + MGP_WSBEiJ_P0059927 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059928.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58861301 58974932 + MGP_WSBEiJ_P0059928 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059929.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58861301 58976365 + MGP_WSBEiJ_P0059929 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059930.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58861819 58965076 + Mbnl1 protein_coding retained_intron MGP_WSBEiJ_T0059931.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58861895 58970942 + Mbnl1 protein_coding processed_transcript MGP_WSBEiJ_T0059932.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58940514 58959486 + MGP_WSBEiJ_P0059932 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059933.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58940584 58972556 + MGP_WSBEiJ_P0059933 Mbnl1 protein_coding protein_coding MGP_WSBEiJ_T0059934.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58948872 58961845 + Mbnl1 protein_coding retained_intron MGP_WSBEiJ_T0059935.1 MGP_WSBEiJ_G0026496.1 mouse_genomes_project 3 58969041 58972272 + Mbnl1 protein_coding retained_intron MGP_WSBEiJ_T0061370.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95703649 95714634 - Tars2 protein_coding retained_intron MGP_WSBEiJ_T0061371.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95703649 95718481 - MGP_WSBEiJ_P0061371 Tars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061372.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95703649 95718517 - MGP_WSBEiJ_P0061372 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0061373.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95703649 95718508 - MGP_WSBEiJ_P0061373 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0061374.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95703649 95718497 - MGP_WSBEiJ_P0061374 Tars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061375.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95703649 95718517 - MGP_WSBEiJ_P0061375 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0061376.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95703692 95705821 - Tars2 protein_coding processed_transcript MGP_WSBEiJ_T0061377.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95707533 95718529 - MGP_WSBEiJ_P0061377 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0061378.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95709465 95712214 - Tars2 protein_coding processed_transcript MGP_WSBEiJ_T0061379.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95711195 95718517 - MGP_WSBEiJ_P0061379 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0061380.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95711229 95718484 - MGP_WSBEiJ_P0061380 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0061381.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95712233 95718517 - MGP_WSBEiJ_P0061381 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0061382.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95712256 95718001 - Tars2 protein_coding processed_transcript MGP_WSBEiJ_T0061383.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95712258 95718495 - MGP_WSBEiJ_P0061383 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0061384.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95713894 95714634 - Tars2 protein_coding retained_intron MGP_WSBEiJ_T0061385.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95714020 95718463 - Tars2 protein_coding processed_transcript MGP_WSBEiJ_T0061386.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95714355 95718118 - Tars2 protein_coding retained_intron MGP_WSBEiJ_T0061387.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95714419 95718495 - MGP_WSBEiJ_P0061387 Tars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061388.1 MGP_WSBEiJ_G0026829.1 mouse_genomes_project 3 95718451 95725007 - MGP_WSBEiJ_P0061388 Tars2 protein_coding protein_coding MGP_WSBEiJ_T0100775.1 MGP_WSBEiJ_G0039233.1 mouse_genomes_project 3 87752823 87753876 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001327.1 MGP_WSBEiJ_G0001256.1 mouse_genomes_project 3 137557668 137561570 - TEC TEC MGP_WSBEiJ_T0001301.1 MGP_WSBEiJ_G0001231.1 mouse_genomes_project 3 129015386 129019013 - TEC TEC MGP_WSBEiJ_T0062646.1 MGP_WSBEiJ_G0027110.1 mouse_genomes_project 3 131594346 131600784 - MGP_WSBEiJ_P0062646 Gar1 protein_coding protein_coding MGP_WSBEiJ_T0062647.1 MGP_WSBEiJ_G0027110.1 mouse_genomes_project 3 131594350 131598799 - MGP_WSBEiJ_P0062647 Gar1 protein_coding protein_coding MGP_WSBEiJ_T0062648.1 MGP_WSBEiJ_G0027110.1 mouse_genomes_project 3 131594353 131595103 - Gar1 protein_coding retained_intron MGP_WSBEiJ_T0062649.1 MGP_WSBEiJ_G0027110.1 mouse_genomes_project 3 131594980 131596713 - Gar1 protein_coding retained_intron MGP_WSBEiJ_T0062650.1 MGP_WSBEiJ_G0027110.1 mouse_genomes_project 3 131594999 131600748 - Gar1 protein_coding processed_transcript MGP_WSBEiJ_T0062651.1 MGP_WSBEiJ_G0027110.1 mouse_genomes_project 3 131596274 131600321 - MGP_WSBEiJ_P0062651 Gar1 protein_coding protein_coding MGP_WSBEiJ_T0011336.1 MGP_WSBEiJ_G0009493.1 mouse_genomes_project 3 32168583 32168855 + Mir1897 misc_RNA misc_RNA MGP_WSBEiJ_T0062909.1 MGP_WSBEiJ_G0027162.1 mouse_genomes_project 3 140313648 140337948 + Adh1 protein_coding processed_transcript MGP_WSBEiJ_T0062910.1 MGP_WSBEiJ_G0027162.1 mouse_genomes_project 3 140331859 140346559 + MGP_WSBEiJ_P0062910 Adh1 protein_coding protein_coding MGP_WSBEiJ_T0062911.1 MGP_WSBEiJ_G0027162.1 mouse_genomes_project 3 140332010 140336118 + Adh1 protein_coding retained_intron MGP_WSBEiJ_T0062912.1 MGP_WSBEiJ_G0027162.1 mouse_genomes_project 3 140332016 140346559 + MGP_WSBEiJ_P0062912 Adh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061099.1 MGP_WSBEiJ_G0026783.1 mouse_genomes_project 3 94165658 94167787 + MGP_WSBEiJ_P0061099 C2cd4d protein_coding protein_coding MGP_WSBEiJ_T0061100.1 MGP_WSBEiJ_G0026783.1 mouse_genomes_project 3 94165723 94166385 + C2cd4d protein_coding retained_intron MGP_WSBEiJ_T0060699.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88659301 88660914 + MGP_WSBEiJ_P0060699 Fam189b protein_coding protein_coding MGP_WSBEiJ_T0060700.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88659361 88665289 + MGP_WSBEiJ_P0060700 Fam189b protein_coding protein_coding MGP_WSBEiJ_T0060701.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88659362 88665287 + MGP_WSBEiJ_P0060701 Fam189b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060702.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88659738 88665288 + MGP_WSBEiJ_P0060702 Fam189b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060703.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88659791 88665286 + MGP_WSBEiJ_P0060703 Fam189b protein_coding protein_coding MGP_WSBEiJ_T0060704.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88659799 88665293 + MGP_WSBEiJ_P0060704 Fam189b protein_coding protein_coding MGP_WSBEiJ_T0060705.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88660387 88662004 + Fam189b protein_coding retained_intron MGP_WSBEiJ_T0060706.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88663367 88664469 + Fam189b protein_coding retained_intron MGP_WSBEiJ_T0060707.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88663925 88664468 + Fam189b protein_coding retained_intron MGP_WSBEiJ_T0060708.1 MGP_WSBEiJ_G0026663.1 mouse_genomes_project 3 88663975 88664772 + Fam189b protein_coding processed_transcript MGP_WSBEiJ_T0013926.1 MGP_WSBEiJ_G0012056.1 mouse_genomes_project 3 136129867 136130333 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004332.1 MGP_WSBEiJ_G0003778.1 mouse_genomes_project 3 157655103 157657796 - Gm20389 antisense antisense MGP_WSBEiJ_T0013740.1 MGP_WSBEiJ_G0011870.1 mouse_genomes_project 3 70634543 70634702 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013630.1 MGP_WSBEiJ_G0011760.1 mouse_genomes_project 3 36823846 36824219 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004310.1 MGP_WSBEiJ_G0003762.1 mouse_genomes_project 3 140145729 140156644 + Gm43691 antisense antisense MGP_WSBEiJ_T0010363.1 MGP_WSBEiJ_G0008520.1 mouse_genomes_project 3 94918196 94918268 + Mir7013 miRNA miRNA MGP_WSBEiJ_T0063385.1 MGP_WSBEiJ_G0027246.1 mouse_genomes_project 3 160930828 160963755 - MGP_WSBEiJ_P0063385 Cth protein_coding protein_coding MGP_WSBEiJ_T0063386.1 MGP_WSBEiJ_G0027246.1 mouse_genomes_project 3 160930977 160934670 - Cth protein_coding processed_transcript MGP_WSBEiJ_T0063387.1 MGP_WSBEiJ_G0027246.1 mouse_genomes_project 3 160934262 160945071 - Cth protein_coding retained_intron MGP_WSBEiJ_T0063388.1 MGP_WSBEiJ_G0027246.1 mouse_genomes_project 3 160957820 160963776 - Cth protein_coding retained_intron MGP_WSBEiJ_T0061603.1 MGP_WSBEiJ_G0026887.1 mouse_genomes_project 3 98461551 98487762 + MGP_WSBEiJ_P0061603 Hmgcs2 protein_coding protein_coding MGP_WSBEiJ_T0061604.1 MGP_WSBEiJ_G0026887.1 mouse_genomes_project 3 98461551 98487768 + MGP_WSBEiJ_P0061604 Hmgcs2 protein_coding protein_coding MGP_WSBEiJ_T0099430.1 MGP_WSBEiJ_G0038093.1 mouse_genomes_project 3 47497759 47497887 + Gm22480 snoRNA snoRNA MGP_WSBEiJ_T0059530.1 MGP_WSBEiJ_G0026416.1 mouse_genomes_project 3 35394676 35400772 - protein_coding processed_transcript MGP_WSBEiJ_T0007650.1 MGP_WSBEiJ_G0006261.1 mouse_genomes_project 3 152238800 152341924 - Gm31121 lincRNA lincRNA MGP_WSBEiJ_T0060142.1 MGP_WSBEiJ_G0026549.1 mouse_genomes_project 3 74442728 74535367 + MGP_WSBEiJ_P0060142 Serpini1 protein_coding protein_coding MGP_WSBEiJ_T0060143.1 MGP_WSBEiJ_G0026549.1 mouse_genomes_project 3 74442728 74506568 + MGP_WSBEiJ_P0060143 Serpini1 protein_coding protein_coding MGP_WSBEiJ_T0060144.1 MGP_WSBEiJ_G0026549.1 mouse_genomes_project 3 74442742 74501013 + Serpini1 protein_coding processed_transcript MGP_WSBEiJ_T0060145.1 MGP_WSBEiJ_G0026549.1 mouse_genomes_project 3 74442759 74506060 + Serpini1 protein_coding retained_intron MGP_WSBEiJ_T0007587.1 MGP_WSBEiJ_G0006208.1 mouse_genomes_project 3 132743525 132744867 - Gm43349 lincRNA lincRNA MGP_WSBEiJ_T0059771.1 MGP_WSBEiJ_G0026459.1 mouse_genomes_project 3 52975782 52980444 - MGP_WSBEiJ_P0059771 Rfxap protein_coding protein_coding MGP_WSBEiJ_T0059772.1 MGP_WSBEiJ_G0026459.1 mouse_genomes_project 3 52976887 52978426 - Rfxap protein_coding processed_transcript MGP_WSBEiJ_T0059773.1 MGP_WSBEiJ_G0026459.1 mouse_genomes_project 3 52978433 52980073 - Rfxap protein_coding processed_transcript MGP_WSBEiJ_T0013677.1 MGP_WSBEiJ_G0011807.1 mouse_genomes_project 3 51023056 51023375 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059331.1 MGP_WSBEiJ_G0026385.1 mouse_genomes_project 3 30211822 30223573 + MGP_WSBEiJ_P0059331 Ndufb5 protein_coding protein_coding MGP_WSBEiJ_T0059332.1 MGP_WSBEiJ_G0026385.1 mouse_genomes_project 3 30211827 30214952 + Ndufb5 protein_coding retained_intron MGP_WSBEiJ_T0059333.1 MGP_WSBEiJ_G0026385.1 mouse_genomes_project 3 30211833 30226237 + MGP_WSBEiJ_P0059333 Ndufb5 protein_coding protein_coding MGP_WSBEiJ_T0059334.1 MGP_WSBEiJ_G0026385.1 mouse_genomes_project 3 30211857 30225918 + MGP_WSBEiJ_P0059334 Ndufb5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059335.1 MGP_WSBEiJ_G0026385.1 mouse_genomes_project 3 30211858 30223144 + MGP_WSBEiJ_P0059335 Ndufb5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059336.1 MGP_WSBEiJ_G0026385.1 mouse_genomes_project 3 30216344 30225774 + MGP_WSBEiJ_P0059336 Ndufb5 protein_coding protein_coding MGP_WSBEiJ_T0058962.1 MGP_WSBEiJ_G0026302.1 mouse_genomes_project 3 7096950 7101038 - MGP_WSBEiJ_P0058962 Pmp2 protein_coding protein_coding MGP_WSBEiJ_T0061341.1 MGP_WSBEiJ_G0026824.1 mouse_genomes_project 3 95544417 95575852 + MGP_WSBEiJ_P0061341 Golph3l protein_coding protein_coding MGP_WSBEiJ_T0061342.1 MGP_WSBEiJ_G0026824.1 mouse_genomes_project 3 95544417 95575857 + MGP_WSBEiJ_P0061342 Golph3l protein_coding protein_coding MGP_WSBEiJ_T0061343.1 MGP_WSBEiJ_G0026824.1 mouse_genomes_project 3 95544417 95575857 + MGP_WSBEiJ_P0061343 Golph3l protein_coding protein_coding MGP_WSBEiJ_T0061344.1 MGP_WSBEiJ_G0026824.1 mouse_genomes_project 3 95544452 95574174 + MGP_WSBEiJ_P0061344 Golph3l protein_coding protein_coding MGP_WSBEiJ_T0061345.1 MGP_WSBEiJ_G0026824.1 mouse_genomes_project 3 95544452 95575851 + MGP_WSBEiJ_P0061345 Golph3l protein_coding protein_coding MGP_WSBEiJ_T0061346.1 MGP_WSBEiJ_G0026824.1 mouse_genomes_project 3 95544457 95575850 + MGP_WSBEiJ_P0061346 Golph3l protein_coding protein_coding MGP_WSBEiJ_T0061347.1 MGP_WSBEiJ_G0026824.1 mouse_genomes_project 3 95544464 95575851 + MGP_WSBEiJ_P0061347 Golph3l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061348.1 MGP_WSBEiJ_G0026824.1 mouse_genomes_project 3 95544473 95574105 + MGP_WSBEiJ_P0061348 Golph3l protein_coding protein_coding MGP_WSBEiJ_T0007426.1 MGP_WSBEiJ_G0006086.1 mouse_genomes_project 3 50804795 50842379 + Gm2447 lincRNA lincRNA MGP_WSBEiJ_T0007427.1 MGP_WSBEiJ_G0006086.1 mouse_genomes_project 3 50830321 50842377 + Gm2447 lincRNA lincRNA MGP_WSBEiJ_T0063333.1 MGP_WSBEiJ_G0027236.1 mouse_genomes_project 3 157234158 157258321 - MGP_WSBEiJ_P0063333 Lhx8 protein_coding protein_coding MGP_WSBEiJ_T0063334.1 MGP_WSBEiJ_G0027236.1 mouse_genomes_project 3 157234160 157257721 - MGP_WSBEiJ_P0063334 Lhx8 protein_coding protein_coding MGP_WSBEiJ_T0063335.1 MGP_WSBEiJ_G0027236.1 mouse_genomes_project 3 157234842 157255828 - MGP_WSBEiJ_P0063335 Lhx8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063336.1 MGP_WSBEiJ_G0027236.1 mouse_genomes_project 3 157244663 157252562 - Lhx8 protein_coding retained_intron MGP_WSBEiJ_T0063337.1 MGP_WSBEiJ_G0027236.1 mouse_genomes_project 3 157249938 157256296 - MGP_WSBEiJ_P0063337 Lhx8 protein_coding protein_coding MGP_WSBEiJ_T0004197.1 MGP_WSBEiJ_G0003690.1 mouse_genomes_project 3 88656913 88658452 - Gm16069 antisense antisense MGP_WSBEiJ_T0060303.1 MGP_WSBEiJ_G0026586.1 mouse_genomes_project 3 83692395 85150562 - MGP_WSBEiJ_P0060303 Gm37240 protein_coding protein_coding MGP_WSBEiJ_T0060325.1 MGP_WSBEiJ_G0026586.1 mouse_genomes_project 3 85060454 85150564 - Gm37240 protein_coding processed_transcript MGP_WSBEiJ_T0060326.1 MGP_WSBEiJ_G0026586.1 mouse_genomes_project 3 85075968 85150414 - Gm37240 protein_coding retained_intron MGP_WSBEiJ_T0013979.1 MGP_WSBEiJ_G0012109.1 mouse_genomes_project 3 155644155 155645852 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013949.1 MGP_WSBEiJ_G0012079.1 mouse_genomes_project 3 141236944 141237382 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007360.1 MGP_WSBEiJ_G0006033.1 mouse_genomes_project 3 16986894 16987977 + 4632415L05Rik lincRNA lincRNA MGP_WSBEiJ_T0007361.1 MGP_WSBEiJ_G0006033.1 mouse_genomes_project 3 16986906 16990816 + 4632415L05Rik lincRNA lincRNA MGP_WSBEiJ_T0004329.1 MGP_WSBEiJ_G0003776.1 mouse_genomes_project 3 156746155 156761579 - Asb17os antisense antisense MGP_WSBEiJ_T0004330.1 MGP_WSBEiJ_G0003776.1 mouse_genomes_project 3 156759550 156761602 - Asb17os antisense antisense MGP_WSBEiJ_T0060825.1 MGP_WSBEiJ_G0026684.1 mouse_genomes_project 3 88936177 88950410 + MGP_WSBEiJ_P0060825 Pbxip1 protein_coding protein_coding MGP_WSBEiJ_T0060826.1 MGP_WSBEiJ_G0026684.1 mouse_genomes_project 3 88936183 88944980 + Pbxip1 protein_coding processed_transcript MGP_WSBEiJ_T0060827.1 MGP_WSBEiJ_G0026684.1 mouse_genomes_project 3 88936186 88945619 + MGP_WSBEiJ_P0060827 Pbxip1 protein_coding protein_coding MGP_WSBEiJ_T0060828.1 MGP_WSBEiJ_G0026684.1 mouse_genomes_project 3 88936225 88944928 + MGP_WSBEiJ_P0060828 Pbxip1 protein_coding protein_coding MGP_WSBEiJ_T0060829.1 MGP_WSBEiJ_G0026684.1 mouse_genomes_project 3 88936227 88944972 + MGP_WSBEiJ_P0060829 Pbxip1 protein_coding protein_coding MGP_WSBEiJ_T0001073.1 MGP_WSBEiJ_G0001006.1 mouse_genomes_project 3 1974944 1977148 + TEC TEC MGP_WSBEiJ_T0001074.1 MGP_WSBEiJ_G0001006.1 mouse_genomes_project 3 1976694 1977027 + TEC TEC MGP_WSBEiJ_T0100799.1 MGP_WSBEiJ_G0039257.1 mouse_genomes_project 3 107273209 107273620 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001142.1 MGP_WSBEiJ_G0001074.1 mouse_genomes_project 3 46054275 46054384 + TEC TEC MGP_WSBEiJ_T0007372.1 MGP_WSBEiJ_G0006044.1 mouse_genomes_project 3 27244902 27280015 + Mannr lincRNA lincRNA MGP_WSBEiJ_T0061995.1 MGP_WSBEiJ_G0026981.1 mouse_genomes_project 3 107951102 107955204 + MGP_WSBEiJ_P0061995 A630076J17Rik protein_coding protein_coding MGP_WSBEiJ_T0060365.1 MGP_WSBEiJ_G0026604.1 mouse_genomes_project 3 86698327 86713648 + MGP_WSBEiJ_P0060365 Fcrl1 protein_coding protein_coding MGP_WSBEiJ_T0060366.1 MGP_WSBEiJ_G0026604.1 mouse_genomes_project 3 86698329 86714041 + MGP_WSBEiJ_P0060366 Fcrl1 protein_coding protein_coding MGP_WSBEiJ_T0060367.1 MGP_WSBEiJ_G0026604.1 mouse_genomes_project 3 86698388 86714042 + MGP_WSBEiJ_P0060367 Fcrl1 protein_coding protein_coding MGP_WSBEiJ_T0060368.1 MGP_WSBEiJ_G0026604.1 mouse_genomes_project 3 86698400 86725331 + MGP_WSBEiJ_P0060368 Fcrl1 protein_coding protein_coding MGP_WSBEiJ_T0060369.1 MGP_WSBEiJ_G0026604.1 mouse_genomes_project 3 86698407 86713662 + MGP_WSBEiJ_P0060369 Fcrl1 protein_coding protein_coding MGP_WSBEiJ_T0060370.1 MGP_WSBEiJ_G0026604.1 mouse_genomes_project 3 86707548 86714006 + Fcrl1 protein_coding retained_intron MGP_WSBEiJ_T0063081.1 MGP_WSBEiJ_G0027196.1 mouse_genomes_project 3 148259004 148402616 + MGP_WSBEiJ_P0063081 Ddah1 protein_coding protein_coding MGP_WSBEiJ_T0063082.1 MGP_WSBEiJ_G0027196.1 mouse_genomes_project 3 148314637 148396379 + Ddah1 protein_coding processed_transcript MGP_WSBEiJ_T0007666.1 MGP_WSBEiJ_G0006272.1 mouse_genomes_project 3 159567797 159583790 - 4930570G19Rik lincRNA lincRNA MGP_WSBEiJ_T0007667.1 MGP_WSBEiJ_G0006272.1 mouse_genomes_project 3 159567805 159583685 - 4930570G19Rik lincRNA lincRNA MGP_WSBEiJ_T0007668.1 MGP_WSBEiJ_G0006272.1 mouse_genomes_project 3 159569459 159583778 - 4930570G19Rik lincRNA lincRNA MGP_WSBEiJ_T0007669.1 MGP_WSBEiJ_G0006272.1 mouse_genomes_project 3 159580800 159583849 - 4930570G19Rik lincRNA lincRNA MGP_WSBEiJ_T0010374.1 MGP_WSBEiJ_G0008531.1 mouse_genomes_project 3 119699192 119699265 + Mir137 miRNA miRNA MGP_WSBEiJ_T0060359.1 MGP_WSBEiJ_G0026601.1 mouse_genomes_project 3 86389073 86492888 - MGP_WSBEiJ_P0060359 Kirrel protein_coding protein_coding MGP_WSBEiJ_T0060360.1 MGP_WSBEiJ_G0026601.1 mouse_genomes_project 3 86389081 86492935 - MGP_WSBEiJ_P0060360 Kirrel protein_coding protein_coding MGP_WSBEiJ_T0060361.1 MGP_WSBEiJ_G0026601.1 mouse_genomes_project 3 86397497 86492738 - MGP_WSBEiJ_P0060361 Kirrel protein_coding protein_coding MGP_WSBEiJ_T0013978.1 MGP_WSBEiJ_G0012108.1 mouse_genomes_project 3 155005409 155006079 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059982.1 MGP_WSBEiJ_G0026509.1 mouse_genomes_project 3 62539187 62570444 + MGP_WSBEiJ_P0059982 Vmn2r1 protein_coding protein_coding MGP_WSBEiJ_T0099420.1 MGP_WSBEiJ_G0038083.1 mouse_genomes_project 3 24299343 24299457 + Gm25152 snoRNA snoRNA MGP_WSBEiJ_T0001253.1 MGP_WSBEiJ_G0001183.1 mouse_genomes_project 3 109327888 109330068 - TEC TEC MGP_WSBEiJ_T0007614.1 MGP_WSBEiJ_G0006233.1 mouse_genomes_project 3 145177006 145188742 + 9530052C20Rik lincRNA lincRNA MGP_WSBEiJ_T0059284.1 MGP_WSBEiJ_G0026377.1 mouse_genomes_project 3 29773793 29807939 - MGP_WSBEiJ_P0059284 Zmat3 protein_coding protein_coding MGP_WSBEiJ_T0059285.1 MGP_WSBEiJ_G0026377.1 mouse_genomes_project 3 29773797 29807881 - MGP_WSBEiJ_P0059285 Zmat3 protein_coding protein_coding MGP_WSBEiJ_T0059286.1 MGP_WSBEiJ_G0026377.1 mouse_genomes_project 3 29803332 29807721 - MGP_WSBEiJ_P0059286 Zmat3 protein_coding protein_coding MGP_WSBEiJ_T0059287.1 MGP_WSBEiJ_G0026377.1 mouse_genomes_project 3 29804452 29808275 - Zmat3 protein_coding retained_intron MGP_WSBEiJ_T0063399.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161050860 161077497 - MGP_WSBEiJ_P0063399 protein_coding protein_coding MGP_WSBEiJ_T0063400.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161051031 161064300 - protein_coding retained_intron MGP_WSBEiJ_T0063401.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161051306 161072617 - MGP_WSBEiJ_P0063401 protein_coding protein_coding MGP_WSBEiJ_T0063402.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161051890 161064018 - protein_coding retained_intron MGP_WSBEiJ_T0063403.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161052256 161077409 - MGP_WSBEiJ_P0063403 protein_coding protein_coding MGP_WSBEiJ_T0063404.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161052281 161052908 - protein_coding retained_intron MGP_WSBEiJ_T0063405.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161052730 161053535 - protein_coding retained_intron MGP_WSBEiJ_T0063406.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161052738 161062882 - MGP_WSBEiJ_P0063406 protein_coding protein_coding MGP_WSBEiJ_T0063407.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161054941 161064547 - protein_coding retained_intron MGP_WSBEiJ_T0063408.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161057273 161059066 - protein_coding retained_intron MGP_WSBEiJ_T0063409.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161060343 161077454 - MGP_WSBEiJ_P0063409 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063410.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161060383 161077473 - MGP_WSBEiJ_P0063410 protein_coding protein_coding MGP_WSBEiJ_T0063411.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161062890 161072306 - MGP_WSBEiJ_P0063411 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063412.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161063807 161072422 - MGP_WSBEiJ_P0063412 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063413.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161064286 161077464 - protein_coding retained_intron MGP_WSBEiJ_T0063414.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161065622 161077469 - protein_coding retained_intron MGP_WSBEiJ_T0063415.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161067412 161072611 - protein_coding retained_intron MGP_WSBEiJ_T0063416.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161071035 161072605 - protein_coding retained_intron MGP_WSBEiJ_T0063417.1 MGP_WSBEiJ_G0027248.1 mouse_genomes_project 3 161071668 161077472 - protein_coding retained_intron MGP_WSBEiJ_T0001331.1 MGP_WSBEiJ_G0001260.1 mouse_genomes_project 3 138730296 138731297 - TEC TEC MGP_WSBEiJ_T0001279.1 MGP_WSBEiJ_G0001209.1 mouse_genomes_project 3 124706316 124708934 - TEC TEC MGP_WSBEiJ_T0060321.1 MGP_WSBEiJ_G0026591.1 mouse_genomes_project 3 84913089 84927007 - Fam160a1 protein_coding retained_intron MGP_WSBEiJ_T0060322.1 MGP_WSBEiJ_G0026591.1 mouse_genomes_project 3 84913091 85076137 - MGP_WSBEiJ_P0060322 Fam160a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060323.1 MGP_WSBEiJ_G0026591.1 mouse_genomes_project 3 84913091 85002904 - MGP_WSBEiJ_P0060323 Fam160a1 protein_coding protein_coding MGP_WSBEiJ_T0060324.1 MGP_WSBEiJ_G0026591.1 mouse_genomes_project 3 84913093 84998121 - MGP_WSBEiJ_P0060324 Fam160a1 protein_coding protein_coding MGP_WSBEiJ_T0013734.1 MGP_WSBEiJ_G0011864.1 mouse_genomes_project 3 68730920 68731647 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001357.1 MGP_WSBEiJ_G0001286.1 mouse_genomes_project 3 159738070 159739389 + TEC TEC MGP_WSBEiJ_T0060252.1 MGP_WSBEiJ_G0026574.1 mouse_genomes_project 3 82155404 82161591 + MGP_WSBEiJ_P0060252 Fga protein_coding protein_coding MGP_WSBEiJ_T0060253.1 MGP_WSBEiJ_G0026574.1 mouse_genomes_project 3 82155543 82162954 + MGP_WSBEiJ_P0060253 Fga protein_coding protein_coding MGP_WSBEiJ_T0059680.1 MGP_WSBEiJ_G0026441.1 mouse_genomes_project 3 49532034 49578441 - MGP_WSBEiJ_P0059680 Setd7 protein_coding protein_coding MGP_WSBEiJ_T0059681.1 MGP_WSBEiJ_G0026441.1 mouse_genomes_project 3 49546696 49553346 - Setd7 protein_coding retained_intron MGP_WSBEiJ_T0059682.1 MGP_WSBEiJ_G0026441.1 mouse_genomes_project 3 49552199 49553827 - Setd7 protein_coding retained_intron MGP_WSBEiJ_T0059683.1 MGP_WSBEiJ_G0026441.1 mouse_genomes_project 3 49566243 49568881 - Setd7 protein_coding retained_intron MGP_WSBEiJ_T0004194.1 MGP_WSBEiJ_G0003687.1 mouse_genomes_project 3 88013368 88019412 - Gm20652 antisense antisense MGP_WSBEiJ_T0059716.1 MGP_WSBEiJ_G0026449.1 mouse_genomes_project 3 51558102 51569683 + Stoml3 protein_coding retained_intron MGP_WSBEiJ_T0059717.1 MGP_WSBEiJ_G0026449.1 mouse_genomes_project 3 51558176 51580408 + MGP_WSBEiJ_P0059717 Stoml3 protein_coding protein_coding MGP_WSBEiJ_T0060958.1 MGP_WSBEiJ_G0026706.1 mouse_genomes_project 3 89981623 90025204 - MGP_WSBEiJ_P0060958 Ints3 protein_coding protein_coding MGP_WSBEiJ_T0060959.1 MGP_WSBEiJ_G0026706.1 mouse_genomes_project 3 89981631 90025430 - MGP_WSBEiJ_P0060959 Ints3 protein_coding protein_coding MGP_WSBEiJ_T0060960.1 MGP_WSBEiJ_G0026706.1 mouse_genomes_project 3 89982311 89994130 - Ints3 protein_coding retained_intron MGP_WSBEiJ_T0060961.1 MGP_WSBEiJ_G0026706.1 mouse_genomes_project 3 89982311 90025514 - MGP_WSBEiJ_P0060961 Ints3 protein_coding protein_coding MGP_WSBEiJ_T0060962.1 MGP_WSBEiJ_G0026706.1 mouse_genomes_project 3 89984602 89991691 - Ints3 protein_coding retained_intron MGP_WSBEiJ_T0060963.1 MGP_WSBEiJ_G0026706.1 mouse_genomes_project 3 89992020 89993590 - Ints3 protein_coding retained_intron MGP_WSBEiJ_T0060964.1 MGP_WSBEiJ_G0026706.1 mouse_genomes_project 3 89998807 90025523 - Ints3 protein_coding retained_intron MGP_WSBEiJ_T0060576.1 MGP_WSBEiJ_G0026646.1 mouse_genomes_project 3 87970423 87979717 + MGP_WSBEiJ_P0060576 Ssr2 protein_coding protein_coding MGP_WSBEiJ_T0060577.1 MGP_WSBEiJ_G0026646.1 mouse_genomes_project 3 87974799 87984460 + MGP_WSBEiJ_P0060577 Ssr2 protein_coding protein_coding MGP_WSBEiJ_T0060578.1 MGP_WSBEiJ_G0026646.1 mouse_genomes_project 3 87974832 87984060 + MGP_WSBEiJ_P0060578 Ssr2 protein_coding protein_coding MGP_WSBEiJ_T0060579.1 MGP_WSBEiJ_G0026646.1 mouse_genomes_project 3 87974858 87984074 + MGP_WSBEiJ_P0060579 Ssr2 protein_coding protein_coding MGP_WSBEiJ_T0060580.1 MGP_WSBEiJ_G0026646.1 mouse_genomes_project 3 87974862 87984460 + MGP_WSBEiJ_P0060580 Ssr2 protein_coding protein_coding MGP_WSBEiJ_T0013652.1 MGP_WSBEiJ_G0011782.1 mouse_genomes_project 3 45155334 45155800 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098208.1 MGP_WSBEiJ_G0036871.1 mouse_genomes_project 3 111431667 111431772 - Gm26076 snRNA snRNA MGP_WSBEiJ_T0099432.1 MGP_WSBEiJ_G0038095.1 mouse_genomes_project 3 51585172 51585291 + Gm23675 snoRNA snoRNA MGP_WSBEiJ_T0062058.1 MGP_WSBEiJ_G0026999.1 mouse_genomes_project 3 108719223 108724811 - MGP_WSBEiJ_P0062058 Gstm3 protein_coding protein_coding MGP_WSBEiJ_T0013641.1 MGP_WSBEiJ_G0011771.1 mouse_genomes_project 3 41478544 41479073 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007588.1 MGP_WSBEiJ_G0006209.1 mouse_genomes_project 3 133551989 133831572 + lincRNA lincRNA MGP_WSBEiJ_T0013958.1 MGP_WSBEiJ_G0012088.1 mouse_genomes_project 3 144603877 144604015 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007663.1 MGP_WSBEiJ_G0006269.1 mouse_genomes_project 3 156696102 156698876 - 5730460C07Rik lincRNA lincRNA MGP_WSBEiJ_T0060357.1 MGP_WSBEiJ_G0026599.1 mouse_genomes_project 3 86300625 86305023 - MGP_WSBEiJ_P0060357 protein_coding protein_coding MGP_WSBEiJ_T0062138.1 MGP_WSBEiJ_G0027017.1 mouse_genomes_project 3 109329397 109332868 + 1700013F07Rik protein_coding processed_transcript MGP_WSBEiJ_T0062139.1 MGP_WSBEiJ_G0027017.1 mouse_genomes_project 3 109332708 109338216 + 1700013F07Rik protein_coding processed_transcript MGP_WSBEiJ_T0062140.1 MGP_WSBEiJ_G0027017.1 mouse_genomes_project 3 109332715 109339858 + MGP_WSBEiJ_P0062140 1700013F07Rik protein_coding protein_coding MGP_WSBEiJ_T0100279.1 MGP_WSBEiJ_G0038796.1 mouse_genomes_project 3 140397413 140406321 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100280.1 MGP_WSBEiJ_G0038796.1 mouse_genomes_project 3 140399442 140413427 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100281.1 MGP_WSBEiJ_G0038796.1 mouse_genomes_project 3 140408021 140414511 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0004271.1 MGP_WSBEiJ_G0003733.1 mouse_genomes_project 3 111119525 111123217 + C130013H08Rik antisense antisense MGP_WSBEiJ_T0061697.1 MGP_WSBEiJ_G0026917.1 mouse_genomes_project 3 102549643 102612310 + MGP_WSBEiJ_P0061697 Casq2 protein_coding protein_coding MGP_WSBEiJ_T0061698.1 MGP_WSBEiJ_G0026917.1 mouse_genomes_project 3 102549774 102612310 + MGP_WSBEiJ_P0061698 Casq2 protein_coding protein_coding MGP_WSBEiJ_T0061699.1 MGP_WSBEiJ_G0026917.1 mouse_genomes_project 3 102549867 102611124 + MGP_WSBEiJ_P0061699 Casq2 protein_coding protein_coding MGP_WSBEiJ_T0061700.1 MGP_WSBEiJ_G0026917.1 mouse_genomes_project 3 102590785 102611141 + Casq2 protein_coding processed_transcript MGP_WSBEiJ_T0061701.1 MGP_WSBEiJ_G0026917.1 mouse_genomes_project 3 102609843 102611381 + Casq2 protein_coding retained_intron MGP_WSBEiJ_T0060250.1 MGP_WSBEiJ_G0026573.1 mouse_genomes_project 3 82136382 82144387 + MGP_WSBEiJ_P0060250 Fgg protein_coding protein_coding MGP_WSBEiJ_T0060251.1 MGP_WSBEiJ_G0026573.1 mouse_genomes_project 3 82136519 82143316 + MGP_WSBEiJ_P0060251 Fgg protein_coding protein_coding MGP_WSBEiJ_T0013819.1 MGP_WSBEiJ_G0011949.1 mouse_genomes_project 3 99161909 99162095 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062897.1 MGP_WSBEiJ_G0027159.1 mouse_genomes_project 3 140187551 140203964 + MGP_WSBEiJ_P0062897 Trmt10a protein_coding protein_coding MGP_WSBEiJ_T0062898.1 MGP_WSBEiJ_G0027159.1 mouse_genomes_project 3 140187572 140199937 + Trmt10a protein_coding retained_intron MGP_WSBEiJ_T0062899.1 MGP_WSBEiJ_G0027159.1 mouse_genomes_project 3 140187620 140203961 + MGP_WSBEiJ_P0062899 Trmt10a protein_coding protein_coding MGP_WSBEiJ_T0062900.1 MGP_WSBEiJ_G0027159.1 mouse_genomes_project 3 140187902 140192475 + MGP_WSBEiJ_P0062900 Trmt10a protein_coding protein_coding MGP_WSBEiJ_T0062901.1 MGP_WSBEiJ_G0027159.1 mouse_genomes_project 3 140187964 140192577 + MGP_WSBEiJ_P0062901 Trmt10a protein_coding protein_coding MGP_WSBEiJ_T0062902.1 MGP_WSBEiJ_G0027159.1 mouse_genomes_project 3 140188013 140194594 + MGP_WSBEiJ_P0062902 Trmt10a protein_coding protein_coding MGP_WSBEiJ_T0013562.1 MGP_WSBEiJ_G0011692.1 mouse_genomes_project 3 11953189 11954173 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063338.1 MGP_WSBEiJ_G0027237.1 mouse_genomes_project 3 157525459 157545318 - MGP_WSBEiJ_P0063338 Tyw3 protein_coding protein_coding MGP_WSBEiJ_T0063339.1 MGP_WSBEiJ_G0027237.1 mouse_genomes_project 3 157529413 157542759 - Tyw3 protein_coding processed_transcript MGP_WSBEiJ_T0063340.1 MGP_WSBEiJ_G0027237.1 mouse_genomes_project 3 157535763 157545349 - MGP_WSBEiJ_P0063340 Tyw3 protein_coding protein_coding MGP_WSBEiJ_T0007559.1 MGP_WSBEiJ_G0006189.1 mouse_genomes_project 3 121967827 122245801 - lincRNA lincRNA MGP_WSBEiJ_T0007560.1 MGP_WSBEiJ_G0006189.1 mouse_genomes_project 3 122061216 122245800 - lincRNA lincRNA MGP_WSBEiJ_T0007561.1 MGP_WSBEiJ_G0006189.1 mouse_genomes_project 3 122065540 122245782 - lincRNA lincRNA MGP_WSBEiJ_T0007562.1 MGP_WSBEiJ_G0006189.1 mouse_genomes_project 3 122134239 122245759 - lincRNA lincRNA MGP_WSBEiJ_T0013563.1 MGP_WSBEiJ_G0011693.1 mouse_genomes_project 3 12881315 12882537 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001099.1 MGP_WSBEiJ_G0001031.1 mouse_genomes_project 3 27989743 27990633 - TEC TEC MGP_WSBEiJ_T0001263.1 MGP_WSBEiJ_G0001193.1 mouse_genomes_project 3 119816626 119820072 + TEC TEC MGP_WSBEiJ_T0010386.1 MGP_WSBEiJ_G0008543.1 mouse_genomes_project 3 137023726 137023832 + Gm24048 miRNA miRNA MGP_WSBEiJ_T0059385.1 MGP_WSBEiJ_G0026392.1 mouse_genomes_project 3 32180682 32182733 + MGP_WSBEiJ_P0059385 Sox2 protein_coding protein_coding MGP_WSBEiJ_T0007424.1 MGP_WSBEiJ_G0006084.1 mouse_genomes_project 3 50233490 50235732 + Gm37170 lincRNA lincRNA MGP_WSBEiJ_T0013920.1 MGP_WSBEiJ_G0012050.1 mouse_genomes_project 3 133223824 133224019 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010384.1 MGP_WSBEiJ_G0008541.1 mouse_genomes_project 3 136000266 136000357 - Gm44361 miRNA miRNA MGP_WSBEiJ_T0061794.1 MGP_WSBEiJ_G0026933.1 mouse_genomes_project 3 104250992 104263684 - Olfml3 protein_coding processed_transcript MGP_WSBEiJ_T0061795.1 MGP_WSBEiJ_G0026933.1 mouse_genomes_project 3 104261121 104267456 - MGP_WSBEiJ_P0061795 Olfml3 protein_coding protein_coding MGP_WSBEiJ_T0061796.1 MGP_WSBEiJ_G0026933.1 mouse_genomes_project 3 104261135 104262009 - MGP_WSBEiJ_P0061796 Olfml3 protein_coding protein_coding MGP_WSBEiJ_T0061797.1 MGP_WSBEiJ_G0026933.1 mouse_genomes_project 3 104263154 104267423 - Olfml3 protein_coding retained_intron MGP_WSBEiJ_T0004151.1 MGP_WSBEiJ_G0003654.1 mouse_genomes_project 3 35004415 35018949 - Fgf2os antisense antisense MGP_WSBEiJ_T0013607.1 MGP_WSBEiJ_G0011737.1 mouse_genomes_project 3 31211645 31214591 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097047.1 MGP_WSBEiJ_G0035728.1 mouse_genomes_project 3 129398782 129398879 + Gm23279 rRNA rRNA MGP_WSBEiJ_T0060925.1 MGP_WSBEiJ_G0026700.1 mouse_genomes_project 3 89803468 89809232 + MGP_WSBEiJ_P0060925 Jtb protein_coding protein_coding MGP_WSBEiJ_T0060926.1 MGP_WSBEiJ_G0026700.1 mouse_genomes_project 3 89803483 89808937 + MGP_WSBEiJ_P0060926 Jtb protein_coding protein_coding MGP_WSBEiJ_T0060927.1 MGP_WSBEiJ_G0026700.1 mouse_genomes_project 3 89803505 89808812 + Jtb protein_coding retained_intron MGP_WSBEiJ_T0060928.1 MGP_WSBEiJ_G0026700.1 mouse_genomes_project 3 89803918 89807347 + Jtb protein_coding retained_intron MGP_WSBEiJ_T0007659.1 MGP_WSBEiJ_G0006266.1 mouse_genomes_project 3 154729196 154732939 + lincRNA lincRNA MGP_WSBEiJ_T0013547.1 MGP_WSBEiJ_G0011677.1 mouse_genomes_project 3 8592156 8593170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061106.1 MGP_WSBEiJ_G0026786.1 mouse_genomes_project 3 94217306 94235168 + MGP_WSBEiJ_P0061106 Tdrkh protein_coding protein_coding MGP_WSBEiJ_T0061107.1 MGP_WSBEiJ_G0026786.1 mouse_genomes_project 3 94217333 94229655 + MGP_WSBEiJ_P0061107 Tdrkh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061108.1 MGP_WSBEiJ_G0026786.1 mouse_genomes_project 3 94217350 94230947 + MGP_WSBEiJ_P0061108 Tdrkh protein_coding protein_coding MGP_WSBEiJ_T0061109.1 MGP_WSBEiJ_G0026786.1 mouse_genomes_project 3 94226819 94236068 + MGP_WSBEiJ_P0061109 Tdrkh protein_coding protein_coding MGP_WSBEiJ_T0061110.1 MGP_WSBEiJ_G0026786.1 mouse_genomes_project 3 94226819 94236055 + MGP_WSBEiJ_P0061110 Tdrkh protein_coding protein_coding MGP_WSBEiJ_T0097360.1 MGP_WSBEiJ_G0036034.1 mouse_genomes_project 3 104680682 104683501 - sense_intronic sense_intronic MGP_WSBEiJ_T0062166.1 MGP_WSBEiJ_G0027023.1 mouse_genomes_project 3 109545944 109591083 + MGP_WSBEiJ_P0062166 Aknad1 protein_coding protein_coding MGP_WSBEiJ_T0062167.1 MGP_WSBEiJ_G0027023.1 mouse_genomes_project 3 109550297 109582252 + MGP_WSBEiJ_P0062167 Aknad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062168.1 MGP_WSBEiJ_G0027023.1 mouse_genomes_project 3 109559367 109568983 + Aknad1 protein_coding retained_intron MGP_WSBEiJ_T0062169.1 MGP_WSBEiJ_G0027023.1 mouse_genomes_project 3 109567092 109581957 + Aknad1 protein_coding retained_intron MGP_WSBEiJ_T0013802.1 MGP_WSBEiJ_G0011932.1 mouse_genomes_project 3 93285866 93286350 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013900.1 MGP_WSBEiJ_G0012030.1 mouse_genomes_project 3 124540386 124540810 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013970.1 MGP_WSBEiJ_G0012100.1 mouse_genomes_project 3 149266517 149267133 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001166.1 MGP_WSBEiJ_G0001097.1 mouse_genomes_project 3 49906491 49909107 - TEC TEC MGP_WSBEiJ_T0062572.1 MGP_WSBEiJ_G0027096.1 mouse_genomes_project 3 129178628 129198002 - MGP_WSBEiJ_P0062572 Larp7 protein_coding protein_coding MGP_WSBEiJ_T0062573.1 MGP_WSBEiJ_G0027096.1 mouse_genomes_project 3 129178868 129197971 - MGP_WSBEiJ_P0062573 Larp7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0062574.1 MGP_WSBEiJ_G0027096.1 mouse_genomes_project 3 129186071 129190932 - Larp7 protein_coding retained_intron MGP_WSBEiJ_T0062576.1 MGP_WSBEiJ_G0027096.1 mouse_genomes_project 3 129189865 129197850 - Larp7 protein_coding retained_intron MGP_WSBEiJ_T0062577.1 MGP_WSBEiJ_G0027096.1 mouse_genomes_project 3 129190528 129198000 - MGP_WSBEiJ_P0062577 Larp7 protein_coding protein_coding MGP_WSBEiJ_T0062955.1 MGP_WSBEiJ_G0027171.1 mouse_genomes_project 3 143400564 143402916 - MGP_WSBEiJ_P0062955 Pdha2 protein_coding protein_coding MGP_WSBEiJ_T0061335.1 MGP_WSBEiJ_G0026821.1 mouse_genomes_project 3 95446187 95456694 + MGP_WSBEiJ_P0061335 Ctsk protein_coding protein_coding MGP_WSBEiJ_T0013984.1 MGP_WSBEiJ_G0012114.1 mouse_genomes_project 3 159265275 159265741 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004118.1 MGP_WSBEiJ_G0003633.1 mouse_genomes_project 3 1933866 1985086 - 2700069I18Rik antisense antisense MGP_WSBEiJ_T0004119.1 MGP_WSBEiJ_G0003633.1 mouse_genomes_project 3 1935257 1985104 - 2700069I18Rik antisense antisense MGP_WSBEiJ_T0007433.1 MGP_WSBEiJ_G0006092.1 mouse_genomes_project 3 55812935 55828546 - Gm26671 lincRNA lincRNA MGP_WSBEiJ_T0007434.1 MGP_WSBEiJ_G0006092.1 mouse_genomes_project 3 55823747 55828607 - Gm26671 lincRNA lincRNA MGP_WSBEiJ_T0007435.1 MGP_WSBEiJ_G0006092.1 mouse_genomes_project 3 55824100 55828577 - Gm26671 lincRNA lincRNA MGP_WSBEiJ_T0007436.1 MGP_WSBEiJ_G0006092.1 mouse_genomes_project 3 55825654 55828613 - Gm26671 lincRNA lincRNA MGP_WSBEiJ_T0060246.1 MGP_WSBEiJ_G0026571.1 mouse_genomes_project 3 81965045 82005581 - MGP_WSBEiJ_P0060246 Rbm46 protein_coding protein_coding MGP_WSBEiJ_T0060247.1 MGP_WSBEiJ_G0026571.1 mouse_genomes_project 3 81965632 81995746 - MGP_WSBEiJ_P0060247 Rbm46 protein_coding protein_coding MGP_WSBEiJ_T0060248.1 MGP_WSBEiJ_G0026571.1 mouse_genomes_project 3 81965635 81995746 - MGP_WSBEiJ_P0060248 Rbm46 protein_coding protein_coding MGP_WSBEiJ_T0060376.1 MGP_WSBEiJ_G0026606.1 mouse_genomes_project 3 86844346 86859069 + MGP_WSBEiJ_P0060376 Etv3 protein_coding protein_coding MGP_WSBEiJ_T0060377.1 MGP_WSBEiJ_G0026606.1 mouse_genomes_project 3 86844517 86859055 + MGP_WSBEiJ_P0060377 Etv3 protein_coding protein_coding MGP_WSBEiJ_T0060378.1 MGP_WSBEiJ_G0026606.1 mouse_genomes_project 3 86844546 86859069 + Etv3 protein_coding retained_intron MGP_WSBEiJ_T0060379.1 MGP_WSBEiJ_G0026606.1 mouse_genomes_project 3 86844553 86849983 + MGP_WSBEiJ_P0060379 Etv3 protein_coding protein_coding MGP_WSBEiJ_T0060380.1 MGP_WSBEiJ_G0026606.1 mouse_genomes_project 3 86844557 86849986 + Etv3 protein_coding retained_intron MGP_WSBEiJ_T0001270.1 MGP_WSBEiJ_G0001200.1 mouse_genomes_project 3 123123689 123125509 - TEC TEC MGP_WSBEiJ_T0059407.1 MGP_WSBEiJ_G0026395.1 mouse_genomes_project 3 33563497 33606057 - MGP_WSBEiJ_P0059407 Mccc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059408.1 MGP_WSBEiJ_G0026395.1 mouse_genomes_project 3 33564019 33606126 - MGP_WSBEiJ_P0059408 Mccc1 protein_coding protein_coding MGP_WSBEiJ_T0059409.1 MGP_WSBEiJ_G0026395.1 mouse_genomes_project 3 33564025 33565296 - Mccc1 protein_coding retained_intron MGP_WSBEiJ_T0059410.1 MGP_WSBEiJ_G0026395.1 mouse_genomes_project 3 33565913 33573305 - Mccc1 protein_coding retained_intron MGP_WSBEiJ_T0059411.1 MGP_WSBEiJ_G0026395.1 mouse_genomes_project 3 33577585 33601308 - Mccc1 protein_coding retained_intron MGP_WSBEiJ_T0059412.1 MGP_WSBEiJ_G0026395.1 mouse_genomes_project 3 33579398 33580703 - Mccc1 protein_coding retained_intron MGP_WSBEiJ_T0059413.1 MGP_WSBEiJ_G0026395.1 mouse_genomes_project 3 33579912 33595401 - MGP_WSBEiJ_P0059413 Mccc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059414.1 MGP_WSBEiJ_G0026395.1 mouse_genomes_project 3 33590500 33606089 - MGP_WSBEiJ_P0059414 Mccc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004147.1 MGP_WSBEiJ_G0003651.1 mouse_genomes_project 3 33822190 33824525 + Gm43255 antisense antisense MGP_WSBEiJ_T0062289.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117732103 117768167 - MGP_WSBEiJ_P0062289 Trmt13 protein_coding protein_coding MGP_WSBEiJ_T0062290.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117732104 117748091 - MGP_WSBEiJ_P0062290 Trmt13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062291.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117732105 117748115 - MGP_WSBEiJ_P0062291 Trmt13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062292.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117732346 117734479 - Trmt13 protein_coding processed_transcript MGP_WSBEiJ_T0062293.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117737338 117748143 - Trmt13 protein_coding retained_intron MGP_WSBEiJ_T0062294.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117739022 117747940 - MGP_WSBEiJ_P0062294 Trmt13 protein_coding protein_coding MGP_WSBEiJ_T0062295.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117742852 117747923 - MGP_WSBEiJ_P0062295 Trmt13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062296.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117745275 117748056 - Trmt13 protein_coding retained_intron MGP_WSBEiJ_T0062297.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117747213 117748093 - MGP_WSBEiJ_P0062297 Trmt13 protein_coding protein_coding MGP_WSBEiJ_T0062302.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117748650 117767701 - Trmt13 protein_coding processed_transcript MGP_WSBEiJ_T0062304.1 MGP_WSBEiJ_G0027050.1 mouse_genomes_project 3 117767119 117767988 - Trmt13 protein_coding retained_intron MGP_WSBEiJ_T0059867.1 MGP_WSBEiJ_G0026479.1 mouse_genomes_project 3 56814520 56832893 + MGP_WSBEiJ_P0059867 Selt protein_coding unknown_likely_coding MGP_WSBEiJ_T0059868.1 MGP_WSBEiJ_G0026479.1 mouse_genomes_project 3 56815176 56832884 + MGP_WSBEiJ_P0059868 Selt protein_coding protein_coding MGP_WSBEiJ_T0059869.1 MGP_WSBEiJ_G0026479.1 mouse_genomes_project 3 56815238 56829110 + Selt protein_coding retained_intron MGP_WSBEiJ_T0097358.1 MGP_WSBEiJ_G0036032.1 mouse_genomes_project 3 104637984 104639052 - 9530097N15Rik sense_intronic sense_intronic MGP_WSBEiJ_T0001094.1 MGP_WSBEiJ_G0001026.1 mouse_genomes_project 3 27604916 27607020 - TEC TEC MGP_WSBEiJ_T0060945.1 MGP_WSBEiJ_G0026704.1 mouse_genomes_project 3 89875482 89949511 + MGP_WSBEiJ_P0060945 Gatad2b protein_coding protein_coding MGP_WSBEiJ_T0060946.1 MGP_WSBEiJ_G0026704.1 mouse_genomes_project 3 89875488 89936838 + Gatad2b protein_coding retained_intron MGP_WSBEiJ_T0060947.1 MGP_WSBEiJ_G0026704.1 mouse_genomes_project 3 89875647 89942387 + Gatad2b protein_coding retained_intron MGP_WSBEiJ_T0060948.1 MGP_WSBEiJ_G0026704.1 mouse_genomes_project 3 89876369 89942647 + MGP_WSBEiJ_P0060948 Gatad2b protein_coding protein_coding MGP_WSBEiJ_T0060949.1 MGP_WSBEiJ_G0026704.1 mouse_genomes_project 3 89925859 89928288 + Gatad2b protein_coding retained_intron MGP_WSBEiJ_T0060950.1 MGP_WSBEiJ_G0026704.1 mouse_genomes_project 3 89926484 89942394 + MGP_WSBEiJ_P0060950 Gatad2b protein_coding protein_coding MGP_WSBEiJ_T0060951.1 MGP_WSBEiJ_G0026704.1 mouse_genomes_project 3 89926486 89942353 + MGP_WSBEiJ_P0060951 Gatad2b protein_coding protein_coding MGP_WSBEiJ_T0060952.1 MGP_WSBEiJ_G0026704.1 mouse_genomes_project 3 89935703 89940416 + MGP_WSBEiJ_P0060952 Gatad2b protein_coding protein_coding MGP_WSBEiJ_T0061091.1 MGP_WSBEiJ_G0026780.1 mouse_genomes_project 3 93343869 93353429 + MGP_WSBEiJ_P0061091 S100a10 protein_coding protein_coding MGP_WSBEiJ_T0061092.1 MGP_WSBEiJ_G0026780.1 mouse_genomes_project 3 93343952 93350302 + S100a10 protein_coding retained_intron MGP_WSBEiJ_T0061093.1 MGP_WSBEiJ_G0026780.1 mouse_genomes_project 3 93349523 93353236 + MGP_WSBEiJ_P0061093 S100a10 protein_coding protein_coding MGP_WSBEiJ_T0007472.1 MGP_WSBEiJ_G0006122.1 mouse_genomes_project 3 82057101 82137105 - Gm30097 lincRNA lincRNA MGP_WSBEiJ_T0007473.1 MGP_WSBEiJ_G0006122.1 mouse_genomes_project 3 82057203 82123153 - Gm30097 lincRNA lincRNA MGP_WSBEiJ_T0060362.1 MGP_WSBEiJ_G0026602.1 mouse_genomes_project 3 86573190 86598758 - MGP_WSBEiJ_P0060362 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060363.1 MGP_WSBEiJ_G0026602.1 mouse_genomes_project 3 86584331 86589120 - MGP_WSBEiJ_P0060363 protein_coding protein_coding MGP_WSBEiJ_T0060081.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67654504 67684543 + MGP_WSBEiJ_P0060081 Smc4 protein_coding protein_coding MGP_WSBEiJ_T0060082.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67654736 67667584 + MGP_WSBEiJ_P0060082 Smc4 protein_coding protein_coding MGP_WSBEiJ_T0060083.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67654757 67684538 + MGP_WSBEiJ_P0060083 Smc4 protein_coding protein_coding MGP_WSBEiJ_T0060084.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67654774 67684543 + MGP_WSBEiJ_P0060084 Smc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060085.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67654781 67678013 + MGP_WSBEiJ_P0060085 Smc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060086.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67665965 67667649 + Smc4 protein_coding retained_intron MGP_WSBEiJ_T0060087.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67666171 67668771 + Smc4 protein_coding processed_transcript MGP_WSBEiJ_T0060088.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67668368 67670844 + Smc4 protein_coding retained_intron MGP_WSBEiJ_T0060089.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67671491 67673878 + Smc4 protein_coding retained_intron MGP_WSBEiJ_T0060090.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67673770 67677458 + MGP_WSBEiJ_P0060090 Smc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060091.1 MGP_WSBEiJ_G0026533.1 mouse_genomes_project 3 67680292 67683003 + Smc4 protein_coding retained_intron MGP_WSBEiJ_T0060987.1 MGP_WSBEiJ_G0026712.1 mouse_genomes_project 3 90122619 90134844 + MGP_WSBEiJ_P0060987 S100a13 protein_coding protein_coding MGP_WSBEiJ_T0060653.1 MGP_WSBEiJ_G0026655.1 mouse_genomes_project 3 88405250 88544879 + MGP_WSBEiJ_P0060653 Ash1l protein_coding unknown_likely_coding MGP_WSBEiJ_T0060654.1 MGP_WSBEiJ_G0026655.1 mouse_genomes_project 3 88485300 88490386 + Ash1l protein_coding retained_intron MGP_WSBEiJ_T0060655.1 MGP_WSBEiJ_G0026655.1 mouse_genomes_project 3 88518035 88521311 + Ash1l protein_coding retained_intron MGP_WSBEiJ_T0001224.1 MGP_WSBEiJ_G0001154.1 mouse_genomes_project 3 87384573 87386841 + TEC TEC MGP_WSBEiJ_T0060061.1 MGP_WSBEiJ_G0026529.1 mouse_genomes_project 3 67316360 67324264 + MGP_WSBEiJ_P0060061 Il12a protein_coding protein_coding MGP_WSBEiJ_T0060062.1 MGP_WSBEiJ_G0026529.1 mouse_genomes_project 3 67317140 67324260 + MGP_WSBEiJ_P0060062 Il12a protein_coding protein_coding MGP_WSBEiJ_T0060063.1 MGP_WSBEiJ_G0026529.1 mouse_genomes_project 3 67317243 67323808 + Il12a protein_coding retained_intron MGP_WSBEiJ_T0060064.1 MGP_WSBEiJ_G0026529.1 mouse_genomes_project 3 67319709 67323740 + Il12a protein_coding retained_intron MGP_WSBEiJ_T0060065.1 MGP_WSBEiJ_G0026529.1 mouse_genomes_project 3 67319737 67324262 + Il12a protein_coding retained_intron MGP_WSBEiJ_T0060066.1 MGP_WSBEiJ_G0026529.1 mouse_genomes_project 3 67319737 67324264 + Il12a protein_coding retained_intron MGP_WSBEiJ_T0001329.1 MGP_WSBEiJ_G0001258.1 mouse_genomes_project 3 137793713 137797579 + TEC TEC MGP_WSBEiJ_T0013710.1 MGP_WSBEiJ_G0011840.1 mouse_genomes_project 3 61583477 61584096 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063352.1 MGP_WSBEiJ_G0027239.1 mouse_genomes_project 3 157608209 157719987 + MGP_WSBEiJ_P0063352 protein_coding protein_coding MGP_WSBEiJ_T0063353.1 MGP_WSBEiJ_G0027239.1 mouse_genomes_project 3 157657560 157696126 + MGP_WSBEiJ_P0063353 protein_coding protein_coding MGP_WSBEiJ_T0063354.1 MGP_WSBEiJ_G0027239.1 mouse_genomes_project 3 157658307 157660964 + protein_coding processed_transcript MGP_WSBEiJ_T0063355.1 MGP_WSBEiJ_G0027239.1 mouse_genomes_project 3 157708071 157719986 + MGP_WSBEiJ_P0063355 protein_coding protein_coding MGP_WSBEiJ_T0001220.1 MGP_WSBEiJ_G0001150.1 mouse_genomes_project 3 83238526 83242958 - TEC TEC MGP_WSBEiJ_T0004247.1 MGP_WSBEiJ_G0003723.1 mouse_genomes_project 3 105607691 105618591 + Gm42956 antisense antisense MGP_WSBEiJ_T0061973.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107398417 107447434 + MGP_WSBEiJ_P0061973 Lrif1 protein_coding protein_coding MGP_WSBEiJ_T0061974.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107398428 107443729 + Lrif1 protein_coding processed_transcript MGP_WSBEiJ_T0061975.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433385 107443742 + MGP_WSBEiJ_P0061975 Lrif1 protein_coding protein_coding MGP_WSBEiJ_T0061976.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433550 107445912 + MGP_WSBEiJ_P0061976 Lrif1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061977.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433550 107448107 + MGP_WSBEiJ_P0061977 Lrif1 protein_coding protein_coding MGP_WSBEiJ_T0061978.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433565 107443580 + MGP_WSBEiJ_P0061978 Lrif1 protein_coding protein_coding MGP_WSBEiJ_T0061979.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433582 107446148 + Lrif1 protein_coding retained_intron MGP_WSBEiJ_T0061980.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433583 107438341 + Lrif1 protein_coding retained_intron MGP_WSBEiJ_T0061981.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433583 107445118 + Lrif1 protein_coding processed_transcript MGP_WSBEiJ_T0061982.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433593 107448104 + MGP_WSBEiJ_P0061982 Lrif1 protein_coding protein_coding MGP_WSBEiJ_T0061983.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107433624 107443594 + MGP_WSBEiJ_P0061983 Lrif1 protein_coding protein_coding MGP_WSBEiJ_T0061984.1 MGP_WSBEiJ_G0026974.1 mouse_genomes_project 3 107444444 107445358 + Lrif1 protein_coding retained_intron MGP_WSBEiJ_T0061408.1 MGP_WSBEiJ_G0026833.1 mouse_genomes_project 3 95854366 95858199 - MGP_WSBEiJ_P0061408 Ciart protein_coding protein_coding MGP_WSBEiJ_T0061409.1 MGP_WSBEiJ_G0026833.1 mouse_genomes_project 3 95854479 95858248 - MGP_WSBEiJ_P0061409 Ciart protein_coding protein_coding MGP_WSBEiJ_T0061410.1 MGP_WSBEiJ_G0026833.1 mouse_genomes_project 3 95854489 95858225 - MGP_WSBEiJ_P0061410 Ciart protein_coding protein_coding MGP_WSBEiJ_T0061411.1 MGP_WSBEiJ_G0026833.1 mouse_genomes_project 3 95854791 95858245 - MGP_WSBEiJ_P0061411 Ciart protein_coding protein_coding MGP_WSBEiJ_T0061412.1 MGP_WSBEiJ_G0026833.1 mouse_genomes_project 3 95855497 95857240 - MGP_WSBEiJ_P0061412 Ciart protein_coding protein_coding MGP_WSBEiJ_T0061413.1 MGP_WSBEiJ_G0026833.1 mouse_genomes_project 3 95856666 95858068 - MGP_WSBEiJ_P0061413 Ciart protein_coding protein_coding MGP_WSBEiJ_T0061661.1 MGP_WSBEiJ_G0026906.1 mouse_genomes_project 3 101215477 101289007 + MGP_WSBEiJ_P0061661 Vtcn1 protein_coding protein_coding MGP_WSBEiJ_T0061994.1 MGP_WSBEiJ_G0026980.1 mouse_genomes_project 3 107931703 107942207 - MGP_WSBEiJ_P0061994 Cym protein_coding protein_coding MGP_WSBEiJ_T0061576.1 MGP_WSBEiJ_G0026880.1 mouse_genomes_project 3 97799746 97812350 + MGP_WSBEiJ_P0061576 Prkab2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061577.1 MGP_WSBEiJ_G0026880.1 mouse_genomes_project 3 97799765 97815360 + MGP_WSBEiJ_P0061577 Prkab2 protein_coding protein_coding MGP_WSBEiJ_T0061578.1 MGP_WSBEiJ_G0026880.1 mouse_genomes_project 3 97799767 97812484 + MGP_WSBEiJ_P0061578 Prkab2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061579.1 MGP_WSBEiJ_G0026880.1 mouse_genomes_project 3 97808078 97814653 + Prkab2 protein_coding retained_intron MGP_WSBEiJ_T0061580.1 MGP_WSBEiJ_G0026880.1 mouse_genomes_project 3 97808888 97814629 + Prkab2 protein_coding retained_intron MGP_WSBEiJ_T0061581.1 MGP_WSBEiJ_G0026880.1 mouse_genomes_project 3 97811746 97812599 + Prkab2 protein_coding processed_transcript MGP_WSBEiJ_T0010357.1 MGP_WSBEiJ_G0008514.1 mouse_genomes_project 3 88705468 88705551 - Mir92b miRNA miRNA MGP_WSBEiJ_T0001160.1 MGP_WSBEiJ_G0001092.1 mouse_genomes_project 3 49711145 49712509 + TEC TEC MGP_WSBEiJ_T0001161.1 MGP_WSBEiJ_G0001092.1 mouse_genomes_project 3 49711200 49712509 + TEC TEC MGP_WSBEiJ_T0001318.1 MGP_WSBEiJ_G0001247.1 mouse_genomes_project 3 132981194 132983453 + TEC TEC MGP_WSBEiJ_T0017379.1 MGP_WSBEiJ_G0014933.1 mouse_genomes_project 3 94929649 94931101 + 4930481B07Rik processed_transcript lincRNA MGP_WSBEiJ_T0017380.1 MGP_WSBEiJ_G0014933.1 mouse_genomes_project 3 94930273 94934177 + 4930481B07Rik processed_transcript processed_transcript MGP_WSBEiJ_T0100068.1 MGP_WSBEiJ_G0038685.1 mouse_genomes_project 3 45999090 45999752 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0098231.1 MGP_WSBEiJ_G0036894.1 mouse_genomes_project 3 162922168 162922275 - Gm23941 snRNA snRNA MGP_WSBEiJ_T0061222.1 MGP_WSBEiJ_G0026802.1 mouse_genomes_project 3 94975229 95027037 - MGP_WSBEiJ_P0061222 Pip5k1a protein_coding protein_coding MGP_WSBEiJ_T0061223.1 MGP_WSBEiJ_G0026802.1 mouse_genomes_project 3 94975242 95027092 - MGP_WSBEiJ_P0061223 Pip5k1a protein_coding protein_coding MGP_WSBEiJ_T0061224.1 MGP_WSBEiJ_G0026802.1 mouse_genomes_project 3 94975244 95027018 - MGP_WSBEiJ_P0061224 Pip5k1a protein_coding protein_coding MGP_WSBEiJ_T0061225.1 MGP_WSBEiJ_G0026802.1 mouse_genomes_project 3 94975268 95026941 - MGP_WSBEiJ_P0061225 Pip5k1a protein_coding protein_coding MGP_WSBEiJ_T0061226.1 MGP_WSBEiJ_G0026802.1 mouse_genomes_project 3 94987426 94996033 - Pip5k1a protein_coding processed_transcript MGP_WSBEiJ_T0061227.1 MGP_WSBEiJ_G0026802.1 mouse_genomes_project 3 94995621 95000747 - Pip5k1a protein_coding retained_intron MGP_WSBEiJ_T0061228.1 MGP_WSBEiJ_G0026802.1 mouse_genomes_project 3 95017370 95026985 - Pip5k1a protein_coding processed_transcript MGP_WSBEiJ_T0001354.1 MGP_WSBEiJ_G0001283.1 mouse_genomes_project 3 157876830 157880810 + TEC TEC MGP_WSBEiJ_T0010347.1 MGP_WSBEiJ_G0008504.1 mouse_genomes_project 3 67659474 67659569 + Mir16-2 miRNA miRNA MGP_WSBEiJ_T0007494.1 MGP_WSBEiJ_G0006133.1 mouse_genomes_project 3 87917486 87918766 - Gm37584 lincRNA lincRNA MGP_WSBEiJ_T0062993.1 MGP_WSBEiJ_G0027178.1 mouse_genomes_project 3 144819374 144911272 + MGP_WSBEiJ_P0062993 protein_coding protein_coding MGP_WSBEiJ_T0061767.1 MGP_WSBEiJ_G0026928.1 mouse_genomes_project 3 103597429 103664648 + MGP_WSBEiJ_P0061767 Dennd2c protein_coding protein_coding MGP_WSBEiJ_T0061768.1 MGP_WSBEiJ_G0026928.1 mouse_genomes_project 3 103597485 103651263 + Dennd2c protein_coding retained_intron MGP_WSBEiJ_T0061769.1 MGP_WSBEiJ_G0026928.1 mouse_genomes_project 3 103622815 103664617 + MGP_WSBEiJ_P0061769 Dennd2c protein_coding protein_coding MGP_WSBEiJ_T0061770.1 MGP_WSBEiJ_G0026928.1 mouse_genomes_project 3 103634431 103663543 + Dennd2c protein_coding processed_transcript MGP_WSBEiJ_T0061771.1 MGP_WSBEiJ_G0026928.1 mouse_genomes_project 3 103634969 103664610 + Dennd2c protein_coding retained_intron MGP_WSBEiJ_T0061772.1 MGP_WSBEiJ_G0026928.1 mouse_genomes_project 3 103643156 103653434 + Dennd2c protein_coding retained_intron MGP_WSBEiJ_T0013657.1 MGP_WSBEiJ_G0011787.1 mouse_genomes_project 3 47543872 47544431 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013917.1 MGP_WSBEiJ_G0012047.1 mouse_genomes_project 3 132570220 132570518 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062433.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123734879 123878375 + Bcar3 protein_coding retained_intron MGP_WSBEiJ_T0062434.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123871006 123878093 + Bcar3 protein_coding retained_intron MGP_WSBEiJ_T0062435.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123871027 123985128 + MGP_WSBEiJ_P0062435 Bcar3 protein_coding protein_coding MGP_WSBEiJ_T0062436.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123871072 123926403 + Bcar3 protein_coding processed_transcript MGP_WSBEiJ_T0062437.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123938669 123963377 + MGP_WSBEiJ_P0062437 Bcar3 protein_coding protein_coding MGP_WSBEiJ_T0062438.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123959608 123963378 + MGP_WSBEiJ_P0062438 Bcar3 protein_coding protein_coding MGP_WSBEiJ_T0062439.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123962992 123967674 + Bcar3 protein_coding retained_intron MGP_WSBEiJ_T0062440.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123966053 123967862 + MGP_WSBEiJ_P0062440 Bcar3 protein_coding protein_coding MGP_WSBEiJ_T0062441.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123967146 123978147 + MGP_WSBEiJ_P0062441 Bcar3 protein_coding protein_coding MGP_WSBEiJ_T0062442.1 MGP_WSBEiJ_G0027076.1 mouse_genomes_project 3 123979582 123980342 + Bcar3 protein_coding retained_intron MGP_WSBEiJ_T0097333.1 MGP_WSBEiJ_G0036007.1 mouse_genomes_project 3 94387665 94388919 - Gm43768 sense_intronic sense_intronic MGP_WSBEiJ_T0062078.1 MGP_WSBEiJ_G0027003.1 mouse_genomes_project 3 108860412 108869058 + MGP_WSBEiJ_P0062078 Gnat2 protein_coding protein_coding MGP_WSBEiJ_T0062079.1 MGP_WSBEiJ_G0027003.1 mouse_genomes_project 3 108860503 108864008 + MGP_WSBEiJ_P0062079 Gnat2 protein_coding protein_coding MGP_WSBEiJ_T0062080.1 MGP_WSBEiJ_G0027003.1 mouse_genomes_project 3 108860761 108866043 + MGP_WSBEiJ_P0062080 Gnat2 protein_coding protein_coding MGP_WSBEiJ_T0062081.1 MGP_WSBEiJ_G0027003.1 mouse_genomes_project 3 108860815 108869056 + Gnat2 protein_coding retained_intron MGP_WSBEiJ_T0062082.1 MGP_WSBEiJ_G0027003.1 mouse_genomes_project 3 108862071 108866058 + MGP_WSBEiJ_P0062082 Gnat2 protein_coding protein_coding MGP_WSBEiJ_T0062083.1 MGP_WSBEiJ_G0027003.1 mouse_genomes_project 3 108864868 108868917 + Gnat2 protein_coding processed_transcript MGP_WSBEiJ_T0001163.1 MGP_WSBEiJ_G0001094.1 mouse_genomes_project 3 49849470 49850491 - TEC TEC MGP_WSBEiJ_T0013855.1 MGP_WSBEiJ_G0011985.1 mouse_genomes_project 3 108781604 108782048 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061485.1 MGP_WSBEiJ_G0026860.1 mouse_genomes_project 3 96653712 96679936 + MGP_WSBEiJ_P0061485 protein_coding protein_coding MGP_WSBEiJ_T0061486.1 MGP_WSBEiJ_G0026860.1 mouse_genomes_project 3 96672252 96675994 + protein_coding retained_intron MGP_WSBEiJ_T0060254.1 MGP_WSBEiJ_G0026575.1 mouse_genomes_project 3 82169461 82179243 - MGP_WSBEiJ_P0060254 Fgb protein_coding protein_coding MGP_WSBEiJ_T0061617.1 MGP_WSBEiJ_G0026895.1 mouse_genomes_project 3 98995365 99123567 - MGP_WSBEiJ_P0061617 Hsd3b2 protein_coding protein_coding MGP_WSBEiJ_T0061621.1 MGP_WSBEiJ_G0026895.1 mouse_genomes_project 3 98995366 99002144 - MGP_WSBEiJ_P0061621 Hsd3b2 protein_coding protein_coding MGP_WSBEiJ_T0061624.1 MGP_WSBEiJ_G0026895.1 mouse_genomes_project 3 98996333 99123546 - Hsd3b2 protein_coding processed_transcript MGP_WSBEiJ_T0001206.1 MGP_WSBEiJ_G0001136.1 mouse_genomes_project 3 67023220 67030138 + TEC TEC MGP_WSBEiJ_T0001165.1 MGP_WSBEiJ_G0001096.1 mouse_genomes_project 3 49894522 49897373 - TEC TEC MGP_WSBEiJ_T0098215.1 MGP_WSBEiJ_G0036878.1 mouse_genomes_project 3 133889256 133889363 - Gm22421 snRNA snRNA MGP_WSBEiJ_T0059939.1 MGP_WSBEiJ_G0026498.1 mouse_genomes_project 3 59736973 59743801 + MGP_WSBEiJ_P0059939 Rap2b protein_coding protein_coding MGP_WSBEiJ_T0001362.1 MGP_WSBEiJ_G0001291.1 mouse_genomes_project 3 161020019 161023385 + TEC TEC MGP_WSBEiJ_T0059718.1 MGP_WSBEiJ_G0026450.1 mouse_genomes_project 3 51587108 51734625 - MGP_WSBEiJ_P0059718 Frem2 protein_coding protein_coding MGP_WSBEiJ_T0059719.1 MGP_WSBEiJ_G0026450.1 mouse_genomes_project 3 51589005 51619780 - Frem2 protein_coding processed_transcript MGP_WSBEiJ_T0059720.1 MGP_WSBEiJ_G0026450.1 mouse_genomes_project 3 51589109 51596785 - Frem2 protein_coding retained_intron MGP_WSBEiJ_T0059721.1 MGP_WSBEiJ_G0026450.1 mouse_genomes_project 3 51725110 51729500 - Frem2 protein_coding retained_intron MGP_WSBEiJ_T0061471.1 MGP_WSBEiJ_G0026854.1 mouse_genomes_project 3 96480027 96501327 - MGP_WSBEiJ_P0061471 BC107364 protein_coding protein_coding MGP_WSBEiJ_T0061472.1 MGP_WSBEiJ_G0026854.1 mouse_genomes_project 3 96480027 96501327 - MGP_WSBEiJ_P0061472 BC107364 protein_coding protein_coding MGP_WSBEiJ_T0062915.1 MGP_WSBEiJ_G0027164.1 mouse_genomes_project 3 140480410 140484791 + Adh4 protein_coding processed_transcript MGP_WSBEiJ_T0062916.1 MGP_WSBEiJ_G0027164.1 mouse_genomes_project 3 140480431 140493490 + MGP_WSBEiJ_P0062916 Adh4 protein_coding protein_coding MGP_WSBEiJ_T0062917.1 MGP_WSBEiJ_G0027164.1 mouse_genomes_project 3 140480439 140500330 + MGP_WSBEiJ_P0062917 Adh4 protein_coding protein_coding MGP_WSBEiJ_T0001091.1 MGP_WSBEiJ_G0001023.1 mouse_genomes_project 3 26486626 26489757 + TEC TEC MGP_WSBEiJ_T0001247.1 MGP_WSBEiJ_G0001177.1 mouse_genomes_project 3 107197692 107200259 + TEC TEC MGP_WSBEiJ_T0060621.1 MGP_WSBEiJ_G0026650.1 mouse_genomes_project 3 88117598 88135640 + MGP_WSBEiJ_P0060621 Rit1 protein_coding protein_coding MGP_WSBEiJ_T0060622.1 MGP_WSBEiJ_G0026650.1 mouse_genomes_project 3 88117616 88128413 + MGP_WSBEiJ_P0060622 Rit1 protein_coding protein_coding MGP_WSBEiJ_T0060623.1 MGP_WSBEiJ_G0026650.1 mouse_genomes_project 3 88117621 88118748 + Rit1 protein_coding retained_intron MGP_WSBEiJ_T0060624.1 MGP_WSBEiJ_G0026650.1 mouse_genomes_project 3 88117634 88133052 + MGP_WSBEiJ_P0060624 Rit1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060625.1 MGP_WSBEiJ_G0026650.1 mouse_genomes_project 3 88117638 88133060 + Rit1 protein_coding retained_intron MGP_WSBEiJ_T0060626.1 MGP_WSBEiJ_G0026650.1 mouse_genomes_project 3 88117639 88131562 + MGP_WSBEiJ_P0060626 Rit1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060627.1 MGP_WSBEiJ_G0026650.1 mouse_genomes_project 3 88117651 88128363 + Rit1 protein_coding retained_intron MGP_WSBEiJ_T0062706.1 MGP_WSBEiJ_G0027121.1 mouse_genomes_project 3 133084974 133125390 - MGP_WSBEiJ_P0062706 Hadh protein_coding protein_coding MGP_WSBEiJ_T0062707.1 MGP_WSBEiJ_G0027121.1 mouse_genomes_project 3 133096632 133125313 - Hadh protein_coding retained_intron MGP_WSBEiJ_T0013818.1 MGP_WSBEiJ_G0011948.1 mouse_genomes_project 3 98423090 98423578 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013572.1 MGP_WSBEiJ_G0011702.1 mouse_genomes_project 3 15591704 15592105 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001223.1 MGP_WSBEiJ_G0001153.1 mouse_genomes_project 3 85150736 85152280 + TEC TEC MGP_WSBEiJ_T0063319.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156840242 156865256 - MGP_WSBEiJ_P0063319 Acadm protein_coding protein_coding MGP_WSBEiJ_T0063320.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156844593 156850856 - Acadm protein_coding retained_intron MGP_WSBEiJ_T0063321.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156844734 156858446 - Acadm protein_coding retained_intron MGP_WSBEiJ_T0063322.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156850837 156857430 - Acadm protein_coding retained_intron MGP_WSBEiJ_T0063323.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156856944 156859311 - Acadm protein_coding retained_intron MGP_WSBEiJ_T0063324.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156856950 156865091 - MGP_WSBEiJ_P0063324 Acadm protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063325.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156857004 156865070 - MGP_WSBEiJ_P0063325 Acadm protein_coding protein_coding MGP_WSBEiJ_T0063326.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156858931 156865066 - Acadm protein_coding retained_intron MGP_WSBEiJ_T0063327.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156859293 156862523 - Acadm protein_coding retained_intron MGP_WSBEiJ_T0063328.1 MGP_WSBEiJ_G0027234.1 mouse_genomes_project 3 156862221 156865087 - Acadm protein_coding retained_intron MGP_WSBEiJ_T0059337.1 MGP_WSBEiJ_G0026386.1 mouse_genomes_project 3 30293549 30418980 + MGP_WSBEiJ_P0059337 Usp13 protein_coding protein_coding MGP_WSBEiJ_T0059338.1 MGP_WSBEiJ_G0026386.1 mouse_genomes_project 3 30293574 30414196 + MGP_WSBEiJ_P0059338 Usp13 protein_coding protein_coding MGP_WSBEiJ_T0059339.1 MGP_WSBEiJ_G0026386.1 mouse_genomes_project 3 30293714 30395000 + MGP_WSBEiJ_P0059339 Usp13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059340.1 MGP_WSBEiJ_G0026386.1 mouse_genomes_project 3 30394969 30414204 + MGP_WSBEiJ_P0059340 Usp13 protein_coding protein_coding MGP_WSBEiJ_T0060566.1 MGP_WSBEiJ_G0026644.1 mouse_genomes_project 3 87941243 87942520 - Lamtor2 protein_coding retained_intron MGP_WSBEiJ_T0060567.1 MGP_WSBEiJ_G0026644.1 mouse_genomes_project 3 87941243 87944461 - MGP_WSBEiJ_P0060567 Lamtor2 protein_coding protein_coding MGP_WSBEiJ_T0060568.1 MGP_WSBEiJ_G0026644.1 mouse_genomes_project 3 87941244 87944296 - MGP_WSBEiJ_P0060568 Lamtor2 protein_coding protein_coding MGP_WSBEiJ_T0060569.1 MGP_WSBEiJ_G0026644.1 mouse_genomes_project 3 87941245 87944330 - Lamtor2 protein_coding processed_transcript MGP_WSBEiJ_T0060570.1 MGP_WSBEiJ_G0026644.1 mouse_genomes_project 3 87943666 87944511 - Lamtor2 protein_coding retained_intron MGP_WSBEiJ_T0007528.1 MGP_WSBEiJ_G0006162.1 mouse_genomes_project 3 102849424 102851206 + Gm43242 lincRNA lincRNA MGP_WSBEiJ_T0001120.1 MGP_WSBEiJ_G0001052.1 mouse_genomes_project 3 35158699 35164503 + TEC TEC MGP_WSBEiJ_T0001179.1 MGP_WSBEiJ_G0001109.1 mouse_genomes_project 3 51181947 51182771 + TEC TEC MGP_WSBEiJ_T0097383.1 MGP_WSBEiJ_G0036057.1 mouse_genomes_project 3 146551633 146553723 - Gm43445 sense_intronic sense_intronic MGP_WSBEiJ_T0099426.1 MGP_WSBEiJ_G0038089.1 mouse_genomes_project 3 37503363 37503448 - Gm23831 snoRNA snoRNA MGP_WSBEiJ_T0060981.1 MGP_WSBEiJ_G0026710.1 mouse_genomes_project 3 90105889 90116568 - MGP_WSBEiJ_P0060981 Chtop protein_coding protein_coding MGP_WSBEiJ_T0060982.1 MGP_WSBEiJ_G0026710.1 mouse_genomes_project 3 90106872 90116724 - MGP_WSBEiJ_P0060982 Chtop protein_coding unknown_likely_coding MGP_WSBEiJ_T0060983.1 MGP_WSBEiJ_G0026710.1 mouse_genomes_project 3 90109213 90116559 - MGP_WSBEiJ_P0060983 Chtop protein_coding protein_coding MGP_WSBEiJ_T0060984.1 MGP_WSBEiJ_G0026710.1 mouse_genomes_project 3 90110186 90116105 - MGP_WSBEiJ_P0060984 Chtop protein_coding protein_coding MGP_WSBEiJ_T0007349.1 MGP_WSBEiJ_G0006027.1 mouse_genomes_project 3 11950831 11980520 + A930001A20Rik lincRNA lincRNA MGP_WSBEiJ_T0058980.1 MGP_WSBEiJ_G0026310.1 mouse_genomes_project 3 7266824 7281683 - MGP_WSBEiJ_P0058980 Zfand1 protein_coding protein_coding MGP_WSBEiJ_T0058981.1 MGP_WSBEiJ_G0026310.1 mouse_genomes_project 3 7266987 7271760 - Zfand1 protein_coding retained_intron MGP_WSBEiJ_T0058982.1 MGP_WSBEiJ_G0026310.1 mouse_genomes_project 3 7267714 7281673 - MGP_WSBEiJ_P0058982 Zfand1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0058983.1 MGP_WSBEiJ_G0026310.1 mouse_genomes_project 3 7267849 7277535 - MGP_WSBEiJ_P0058983 Zfand1 protein_coding protein_coding MGP_WSBEiJ_T0058984.1 MGP_WSBEiJ_G0026310.1 mouse_genomes_project 3 7271690 7273243 - Zfand1 protein_coding retained_intron MGP_WSBEiJ_T0058985.1 MGP_WSBEiJ_G0026310.1 mouse_genomes_project 3 7272963 7281670 - Zfand1 protein_coding processed_transcript MGP_WSBEiJ_T0058986.1 MGP_WSBEiJ_G0026310.1 mouse_genomes_project 3 7280846 7281672 - Zfand1 protein_coding processed_transcript MGP_WSBEiJ_T0007410.1 MGP_WSBEiJ_G0006075.1 mouse_genomes_project 3 39135743 39142898 - Platr4 lincRNA lincRNA MGP_WSBEiJ_T0007411.1 MGP_WSBEiJ_G0006075.1 mouse_genomes_project 3 39142100 39147623 - Platr4 lincRNA lincRNA MGP_WSBEiJ_T0007412.1 MGP_WSBEiJ_G0006075.1 mouse_genomes_project 3 39143225 39147625 - Platr4 lincRNA lincRNA MGP_WSBEiJ_T0007619.1 MGP_WSBEiJ_G0006237.1 mouse_genomes_project 3 145679045 145682256 + Gm43612 lincRNA lincRNA MGP_WSBEiJ_T0013575.1 MGP_WSBEiJ_G0011705.1 mouse_genomes_project 3 15815291 15815580 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013526.1 MGP_WSBEiJ_G0011656.1 mouse_genomes_project 3 3510069 3510415 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013722.1 MGP_WSBEiJ_G0011852.1 mouse_genomes_project 3 64789947 64790100 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011338.1 MGP_WSBEiJ_G0009495.1 mouse_genomes_project 3 41636707 41637015 + Gm25714 misc_RNA misc_RNA MGP_WSBEiJ_T0007629.1 MGP_WSBEiJ_G0006246.1 mouse_genomes_project 3 146220689 146301110 - Gm42707 lincRNA lincRNA MGP_WSBEiJ_T0007631.1 MGP_WSBEiJ_G0006246.1 mouse_genomes_project 3 146259583 146300735 - Gm42707 lincRNA lincRNA MGP_WSBEiJ_T0059703.1 MGP_WSBEiJ_G0026446.1 mouse_genomes_project 3 51108842 51323942 + MGP_WSBEiJ_P0059703 Lhfp protein_coding protein_coding MGP_WSBEiJ_T0059704.1 MGP_WSBEiJ_G0026446.1 mouse_genomes_project 3 51108873 51323938 + Lhfp protein_coding processed_transcript MGP_WSBEiJ_T0059705.1 MGP_WSBEiJ_G0026446.1 mouse_genomes_project 3 51108897 51323942 + MGP_WSBEiJ_P0059705 Lhfp protein_coding protein_coding MGP_WSBEiJ_T0059706.1 MGP_WSBEiJ_G0026446.1 mouse_genomes_project 3 51283648 51288167 + Lhfp protein_coding retained_intron MGP_WSBEiJ_T0062666.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131769113 131847993 - MGP_WSBEiJ_P0062666 Sec24b protein_coding protein_coding MGP_WSBEiJ_T0062667.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131769797 131770875 - Sec24b protein_coding retained_intron MGP_WSBEiJ_T0062668.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131769966 131770637 - Sec24b protein_coding processed_transcript MGP_WSBEiJ_T0062669.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131774836 131776580 - Sec24b protein_coding retained_intron MGP_WSBEiJ_T0062670.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131776494 131832910 - MGP_WSBEiJ_P0062670 Sec24b protein_coding protein_coding MGP_WSBEiJ_T0062671.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131794474 131832880 - Sec24b protein_coding retained_intron MGP_WSBEiJ_T0062672.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131794500 131833186 - MGP_WSBEiJ_P0062672 Sec24b protein_coding protein_coding MGP_WSBEiJ_T0062673.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131796872 131819741 - Sec24b protein_coding retained_intron MGP_WSBEiJ_T0062674.1 MGP_WSBEiJ_G0027115.1 mouse_genomes_project 3 131833302 131848639 - Sec24b protein_coding processed_transcript MGP_WSBEiJ_T0059320.1 MGP_WSBEiJ_G0026383.1 mouse_genomes_project 3 30181159 30193578 + MGP_WSBEiJ_P0059320 Actl6a protein_coding protein_coding MGP_WSBEiJ_T0059321.1 MGP_WSBEiJ_G0026383.1 mouse_genomes_project 3 30183368 30201938 + MGP_WSBEiJ_P0059321 Actl6a protein_coding protein_coding MGP_WSBEiJ_T0059322.1 MGP_WSBEiJ_G0026383.1 mouse_genomes_project 3 30183411 30184868 + Actl6a protein_coding retained_intron MGP_WSBEiJ_T0059323.1 MGP_WSBEiJ_G0026383.1 mouse_genomes_project 3 30183626 30193572 + MGP_WSBEiJ_P0059323 Actl6a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059324.1 MGP_WSBEiJ_G0026383.1 mouse_genomes_project 3 30184025 30193621 + MGP_WSBEiJ_P0059324 Actl6a protein_coding protein_coding MGP_WSBEiJ_T0059325.1 MGP_WSBEiJ_G0026383.1 mouse_genomes_project 3 30186244 30187032 + Actl6a protein_coding retained_intron MGP_WSBEiJ_T0059326.1 MGP_WSBEiJ_G0026383.1 mouse_genomes_project 3 30187033 30201738 + MGP_WSBEiJ_P0059326 Actl6a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059327.1 MGP_WSBEiJ_G0026383.1 mouse_genomes_project 3 30193531 30201933 + Actl6a protein_coding retained_intron MGP_WSBEiJ_T0060411.1 MGP_WSBEiJ_G0026611.1 mouse_genomes_project 3 87130796 87152582 + MGP_WSBEiJ_P0060411 Insrr protein_coding protein_coding MGP_WSBEiJ_T0060412.1 MGP_WSBEiJ_G0026611.1 mouse_genomes_project 3 87130810 87141590 + Insrr protein_coding retained_intron MGP_WSBEiJ_T0060413.1 MGP_WSBEiJ_G0026611.1 mouse_genomes_project 3 87130939 87152533 + MGP_WSBEiJ_P0060413 Insrr protein_coding protein_coding MGP_WSBEiJ_T0060414.1 MGP_WSBEiJ_G0026611.1 mouse_genomes_project 3 87138446 87139313 + Insrr protein_coding processed_transcript MGP_WSBEiJ_T0001194.1 MGP_WSBEiJ_G0001124.1 mouse_genomes_project 3 56958500 56959608 + TEC TEC MGP_WSBEiJ_T0060610.1 MGP_WSBEiJ_G0026648.1 mouse_genomes_project 3 88050439 88051684 - MGP_WSBEiJ_P0060610 Rxfp4 protein_coding protein_coding MGP_WSBEiJ_T0062042.1 MGP_WSBEiJ_G0026995.1 mouse_genomes_project 3 108643137 108646003 + MGP_WSBEiJ_P0062042 Gstm5 protein_coding protein_coding MGP_WSBEiJ_T0062043.1 MGP_WSBEiJ_G0026995.1 mouse_genomes_project 3 108643152 108645892 + MGP_WSBEiJ_P0062043 Gstm5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062044.1 MGP_WSBEiJ_G0026995.1 mouse_genomes_project 3 108643162 108646003 + MGP_WSBEiJ_P0062044 Gstm5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062045.1 MGP_WSBEiJ_G0026995.1 mouse_genomes_project 3 108643257 108645662 + MGP_WSBEiJ_P0062045 Gstm5 protein_coding protein_coding MGP_WSBEiJ_T0062046.1 MGP_WSBEiJ_G0026995.1 mouse_genomes_project 3 108643270 108645866 + MGP_WSBEiJ_P0062046 Gstm5 protein_coding protein_coding MGP_WSBEiJ_T0062047.1 MGP_WSBEiJ_G0026995.1 mouse_genomes_project 3 108643563 108645995 + MGP_WSBEiJ_P0062047 Gstm5 protein_coding protein_coding MGP_WSBEiJ_T0001125.1 MGP_WSBEiJ_G0001057.1 mouse_genomes_project 3 35528355 35529624 + TEC TEC MGP_WSBEiJ_T0098225.1 MGP_WSBEiJ_G0036888.1 mouse_genomes_project 3 152001584 152001690 - Gm26468 snRNA snRNA MGP_WSBEiJ_T0061866.1 MGP_WSBEiJ_G0026948.1 mouse_genomes_project 3 105395477 105401147 + MGP_WSBEiJ_P0061866 Rhoc protein_coding protein_coding MGP_WSBEiJ_T0061867.1 MGP_WSBEiJ_G0026948.1 mouse_genomes_project 3 105395898 105399662 + MGP_WSBEiJ_P0061867 Rhoc protein_coding protein_coding MGP_WSBEiJ_T0061868.1 MGP_WSBEiJ_G0026948.1 mouse_genomes_project 3 105398667 105399565 + Rhoc protein_coding retained_intron MGP_WSBEiJ_T0060794.1 MGP_WSBEiJ_G0026677.1 mouse_genomes_project 3 88853060 88858761 + MGP_WSBEiJ_P0060794 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0063134.1 MGP_WSBEiJ_G0027210.1 mouse_genomes_project 3 149144107 149179974 - MGP_WSBEiJ_P0063134 Dnase2b protein_coding protein_coding MGP_WSBEiJ_T0063135.1 MGP_WSBEiJ_G0027210.1 mouse_genomes_project 3 149144107 149160991 - MGP_WSBEiJ_P0063135 Dnase2b protein_coding protein_coding MGP_WSBEiJ_T0099438.1 MGP_WSBEiJ_G0038101.1 mouse_genomes_project 3 66156999 66157131 - Gm25919 snoRNA snoRNA MGP_WSBEiJ_T0060835.1 MGP_WSBEiJ_G0026687.1 mouse_genomes_project 3 89232486 89234152 + Adar protein_coding retained_intron MGP_WSBEiJ_T0060836.1 MGP_WSBEiJ_G0026687.1 mouse_genomes_project 3 89232796 89253523 + Adar protein_coding processed_transcript MGP_WSBEiJ_T0060837.1 MGP_WSBEiJ_G0026687.1 mouse_genomes_project 3 89249069 89270658 + MGP_WSBEiJ_P0060837 Adar protein_coding protein_coding MGP_WSBEiJ_T0060838.1 MGP_WSBEiJ_G0026687.1 mouse_genomes_project 3 89249069 89270658 + MGP_WSBEiJ_P0060838 Adar protein_coding protein_coding MGP_WSBEiJ_T0060839.1 MGP_WSBEiJ_G0026687.1 mouse_genomes_project 3 89249069 89270658 + MGP_WSBEiJ_P0060839 Adar protein_coding protein_coding MGP_WSBEiJ_T0060840.1 MGP_WSBEiJ_G0026687.1 mouse_genomes_project 3 89249132 89272705 + MGP_WSBEiJ_P0060840 Adar protein_coding protein_coding MGP_WSBEiJ_T0060841.1 MGP_WSBEiJ_G0026687.1 mouse_genomes_project 3 89255955 89257659 + Adar protein_coding retained_intron MGP_WSBEiJ_T0060842.1 MGP_WSBEiJ_G0026687.1 mouse_genomes_project 3 89264816 89266383 + Adar protein_coding retained_intron MGP_WSBEiJ_T0100772.1 MGP_WSBEiJ_G0039230.1 mouse_genomes_project 3 82972963 82994102 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013676.1 MGP_WSBEiJ_G0011806.1 mouse_genomes_project 3 50465692 50465933 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001188.1 MGP_WSBEiJ_G0001118.1 mouse_genomes_project 3 54329594 54332481 - TEC TEC MGP_WSBEiJ_T0060338.1 MGP_WSBEiJ_G0026596.1 mouse_genomes_project 3 85496101 85824062 + MGP_WSBEiJ_P0060338 Lrba protein_coding unknown_likely_coding MGP_WSBEiJ_T0060339.1 MGP_WSBEiJ_G0026596.1 mouse_genomes_project 3 85496533 86070016 + MGP_WSBEiJ_P0060339 Lrba protein_coding protein_coding MGP_WSBEiJ_T0060340.1 MGP_WSBEiJ_G0026596.1 mouse_genomes_project 3 85496533 86031713 + MGP_WSBEiJ_P0060340 Lrba protein_coding protein_coding MGP_WSBEiJ_T0060341.1 MGP_WSBEiJ_G0026596.1 mouse_genomes_project 3 85496533 86063531 + MGP_WSBEiJ_P0060341 Lrba protein_coding protein_coding MGP_WSBEiJ_T0060342.1 MGP_WSBEiJ_G0026596.1 mouse_genomes_project 3 85626263 85627619 + Lrba protein_coding retained_intron MGP_WSBEiJ_T0060343.1 MGP_WSBEiJ_G0026596.1 mouse_genomes_project 3 85822750 85892278 + Lrba protein_coding retained_intron MGP_WSBEiJ_T0060346.1 MGP_WSBEiJ_G0026596.1 mouse_genomes_project 3 85827201 85905850 + Lrba protein_coding retained_intron MGP_WSBEiJ_T0060347.1 MGP_WSBEiJ_G0026596.1 mouse_genomes_project 3 85828662 86070019 + MGP_WSBEiJ_P0060347 Lrba protein_coding protein_coding MGP_WSBEiJ_T0063194.1 MGP_WSBEiJ_G0027218.1 mouse_genomes_project 3 154581740 154585970 - MGP_WSBEiJ_P0063194 Ifi44l protein_coding protein_coding MGP_WSBEiJ_T0060743.1 MGP_WSBEiJ_G0026667.1 mouse_genomes_project 3 88708784 88713259 + MGP_WSBEiJ_P0060743 Muc1 protein_coding protein_coding MGP_WSBEiJ_T0060744.1 MGP_WSBEiJ_G0026667.1 mouse_genomes_project 3 88711143 88711987 + Muc1 protein_coding processed_transcript MGP_WSBEiJ_T0060745.1 MGP_WSBEiJ_G0026667.1 mouse_genomes_project 3 88711375 88713075 + Muc1 protein_coding processed_transcript MGP_WSBEiJ_T0059696.1 MGP_WSBEiJ_G0026444.1 mouse_genomes_project 3 50306739 50389174 + MGP_WSBEiJ_P0059696 Foxo1 protein_coding protein_coding MGP_WSBEiJ_T0010375.1 MGP_WSBEiJ_G0008532.1 mouse_genomes_project 3 119700712 119700822 + Gm24155 miRNA miRNA MGP_WSBEiJ_T0013548.1 MGP_WSBEiJ_G0011678.1 mouse_genomes_project 3 9299596 9299963 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013549.1 MGP_WSBEiJ_G0011679.1 mouse_genomes_project 3 9538135 9538712 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007603.1 MGP_WSBEiJ_G0006223.1 mouse_genomes_project 3 139292332 139304384 + Gm567 lincRNA lincRNA MGP_WSBEiJ_T0013850.1 MGP_WSBEiJ_G0011980.1 mouse_genomes_project 3 108073944 108074689 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001102.1 MGP_WSBEiJ_G0001034.1 mouse_genomes_project 3 29813845 29815263 - TEC TEC MGP_WSBEiJ_T0001178.1 MGP_WSBEiJ_G0001108.1 mouse_genomes_project 3 51179447 51179903 + TEC TEC MGP_WSBEiJ_T0060664.1 MGP_WSBEiJ_G0026658.1 mouse_genomes_project 3 88559453 88567819 - MGP_WSBEiJ_P0060664 Fdps protein_coding protein_coding MGP_WSBEiJ_T0060665.1 MGP_WSBEiJ_G0026658.1 mouse_genomes_project 3 88559453 88567748 - MGP_WSBEiJ_P0060665 Fdps protein_coding protein_coding MGP_WSBEiJ_T0060666.1 MGP_WSBEiJ_G0026658.1 mouse_genomes_project 3 88559614 88561545 - MGP_WSBEiJ_P0060666 Fdps protein_coding protein_coding MGP_WSBEiJ_T0060667.1 MGP_WSBEiJ_G0026658.1 mouse_genomes_project 3 88560921 88561849 - Fdps protein_coding retained_intron MGP_WSBEiJ_T0060668.1 MGP_WSBEiJ_G0026658.1 mouse_genomes_project 3 88561229 88567175 - MGP_WSBEiJ_P0060668 Fdps protein_coding protein_coding MGP_WSBEiJ_T0060669.1 MGP_WSBEiJ_G0026658.1 mouse_genomes_project 3 88561464 88567712 - MGP_WSBEiJ_P0060669 Fdps protein_coding protein_coding MGP_WSBEiJ_T0060670.1 MGP_WSBEiJ_G0026658.1 mouse_genomes_project 3 88564798 88567751 - Fdps protein_coding retained_intron MGP_WSBEiJ_T0059039.1 MGP_WSBEiJ_G0026333.1 mouse_genomes_project 3 16270520 16299856 + MGP_WSBEiJ_P0059039 Mtfr1 protein_coding protein_coding MGP_WSBEiJ_T0059040.1 MGP_WSBEiJ_G0026333.1 mouse_genomes_project 3 16270522 16303878 + MGP_WSBEiJ_P0059040 Mtfr1 protein_coding protein_coding MGP_WSBEiJ_T0059041.1 MGP_WSBEiJ_G0026333.1 mouse_genomes_project 3 16270540 16303529 + MGP_WSBEiJ_P0059041 Mtfr1 protein_coding protein_coding MGP_WSBEiJ_T0059042.1 MGP_WSBEiJ_G0026333.1 mouse_genomes_project 3 16271303 16304971 + MGP_WSBEiJ_P0059042 Mtfr1 protein_coding protein_coding MGP_WSBEiJ_T0059043.1 MGP_WSBEiJ_G0026333.1 mouse_genomes_project 3 16271458 16303715 + MGP_WSBEiJ_P0059043 Mtfr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059044.1 MGP_WSBEiJ_G0026333.1 mouse_genomes_project 3 16271467 16299865 + MGP_WSBEiJ_P0059044 Mtfr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059045.1 MGP_WSBEiJ_G0026333.1 mouse_genomes_project 3 16271507 16295714 + MGP_WSBEiJ_P0059045 Mtfr1 protein_coding protein_coding MGP_WSBEiJ_T0059046.1 MGP_WSBEiJ_G0026333.1 mouse_genomes_project 3 16295734 16300383 + Mtfr1 protein_coding retained_intron MGP_WSBEiJ_T0059156.1 MGP_WSBEiJ_G0026355.1 mouse_genomes_project 3 25124783 25156236 - MGP_WSBEiJ_P0059156 Tmem212 protein_coding protein_coding MGP_WSBEiJ_T0061090.1 MGP_WSBEiJ_G0026779.1 mouse_genomes_project 3 93306550 93312249 + MGP_WSBEiJ_P0061090 S100a11 protein_coding protein_coding MGP_WSBEiJ_T0001335.1 MGP_WSBEiJ_G0001264.1 mouse_genomes_project 3 145976579 145982627 + TEC TEC MGP_WSBEiJ_T0100788.1 MGP_WSBEiJ_G0039246.1 mouse_genomes_project 3 94450804 94614741 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0059941.1 MGP_WSBEiJ_G0026500.1 mouse_genomes_project 3 60741891 60862504 + MGP_WSBEiJ_P0059941 Arhgef26 protein_coding protein_coding MGP_WSBEiJ_T0059942.1 MGP_WSBEiJ_G0026500.1 mouse_genomes_project 3 60742546 60773000 + Arhgef26 protein_coding processed_transcript MGP_WSBEiJ_T0059943.1 MGP_WSBEiJ_G0026500.1 mouse_genomes_project 3 60743937 60771393 + Arhgef26 protein_coding retained_intron MGP_WSBEiJ_T0059944.1 MGP_WSBEiJ_G0026500.1 mouse_genomes_project 3 60744648 60774272 + Arhgef26 protein_coding processed_transcript MGP_WSBEiJ_T0059945.1 MGP_WSBEiJ_G0026500.1 mouse_genomes_project 3 60816211 60860494 + MGP_WSBEiJ_P0059945 Arhgef26 protein_coding protein_coding MGP_WSBEiJ_T0059946.1 MGP_WSBEiJ_G0026500.1 mouse_genomes_project 3 60824578 60827419 + Arhgef26 protein_coding retained_intron MGP_WSBEiJ_T0100071.1 MGP_WSBEiJ_G0038687.1 mouse_genomes_project 3 64065187 64088998 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100072.1 MGP_WSBEiJ_G0038687.1 mouse_genomes_project 3 64066621 64067095 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100073.1 MGP_WSBEiJ_G0038687.1 mouse_genomes_project 3 64073168 64090185 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100074.1 MGP_WSBEiJ_G0038687.1 mouse_genomes_project 3 64088305 64090027 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100075.1 MGP_WSBEiJ_G0038687.1 mouse_genomes_project 3 64088338 64090193 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0001233.1 MGP_WSBEiJ_G0001163.1 mouse_genomes_project 3 95596225 95598841 + TEC TEC MGP_WSBEiJ_T0013762.1 MGP_WSBEiJ_G0011892.1 mouse_genomes_project 3 78626221 78626868 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001192.1 MGP_WSBEiJ_G0001122.1 mouse_genomes_project 3 55907228 55908525 - TEC TEC MGP_WSBEiJ_T0061455.1 MGP_WSBEiJ_G0026843.1 mouse_genomes_project 3 96178708 96193865 + MGP_WSBEiJ_P0061455 Sv2a protein_coding protein_coding MGP_WSBEiJ_T0061456.1 MGP_WSBEiJ_G0026843.1 mouse_genomes_project 3 96184201 96185962 + Sv2a protein_coding retained_intron MGP_WSBEiJ_T0061457.1 MGP_WSBEiJ_G0026843.1 mouse_genomes_project 3 96190889 96193862 + Sv2a protein_coding processed_transcript MGP_WSBEiJ_T0013626.1 MGP_WSBEiJ_G0011756.1 mouse_genomes_project 3 35412870 35413245 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001148.1 MGP_WSBEiJ_G0001080.1 mouse_genomes_project 3 48856549 48860327 - TEC TEC MGP_WSBEiJ_T0004140.1 MGP_WSBEiJ_G0003648.1 mouse_genomes_project 3 31305120 31305811 + Gm43140 antisense antisense MGP_WSBEiJ_T0007456.1 MGP_WSBEiJ_G0006109.1 mouse_genomes_project 3 72868380 72877881 - Gm20356 lincRNA lincRNA MGP_WSBEiJ_T0007450.1 MGP_WSBEiJ_G0006104.1 mouse_genomes_project 3 67783236 67807738 + Gm1647 lincRNA lincRNA MGP_WSBEiJ_T0063149.1 MGP_WSBEiJ_G0027213.1 mouse_genomes_project 3 149303195 149391718 - MGP_WSBEiJ_P0063149 Prkacb protein_coding protein_coding MGP_WSBEiJ_T0063150.1 MGP_WSBEiJ_G0027213.1 mouse_genomes_project 3 149303486 149346819 - MGP_WSBEiJ_P0063150 Prkacb protein_coding protein_coding MGP_WSBEiJ_T0063151.1 MGP_WSBEiJ_G0027213.1 mouse_genomes_project 3 149303486 149346299 - MGP_WSBEiJ_P0063151 Prkacb protein_coding protein_coding MGP_WSBEiJ_T0063152.1 MGP_WSBEiJ_G0027213.1 mouse_genomes_project 3 149303488 149357447 - MGP_WSBEiJ_P0063152 Prkacb protein_coding protein_coding MGP_WSBEiJ_T0063153.1 MGP_WSBEiJ_G0027213.1 mouse_genomes_project 3 149305949 149321627 - Prkacb protein_coding retained_intron MGP_WSBEiJ_T0063154.1 MGP_WSBEiJ_G0027213.1 mouse_genomes_project 3 149323972 149365535 - MGP_WSBEiJ_P0063154 Prkacb protein_coding protein_coding MGP_WSBEiJ_T0063155.1 MGP_WSBEiJ_G0027213.1 mouse_genomes_project 3 149323972 149340608 - MGP_WSBEiJ_P0063155 Prkacb protein_coding protein_coding MGP_WSBEiJ_T0063156.1 MGP_WSBEiJ_G0027213.1 mouse_genomes_project 3 149387919 149391748 - Prkacb protein_coding retained_intron MGP_WSBEiJ_T0060019.1 MGP_WSBEiJ_G0026518.1 mouse_genomes_project 3 64819312 64825208 + MGP_WSBEiJ_P0060019 Ptx3 protein_coding protein_coding MGP_WSBEiJ_T0060020.1 MGP_WSBEiJ_G0026518.1 mouse_genomes_project 3 64819647 64820833 + Ptx3 protein_coding retained_intron MGP_WSBEiJ_T0060284.1 MGP_WSBEiJ_G0026583.1 mouse_genomes_project 3 83354493 83355521 + MGP_WSBEiJ_P0060284 Gm6525 protein_coding protein_coding MGP_WSBEiJ_T0100792.1 MGP_WSBEiJ_G0039250.1 mouse_genomes_project 3 98961665 98969317 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099476.1 MGP_WSBEiJ_G0038139.1 mouse_genomes_project 3 130249462 130249571 + Gm22293 snoRNA snoRNA MGP_WSBEiJ_T0061463.1 MGP_WSBEiJ_G0026847.1 mouse_genomes_project 3 96215609 96216076 - MGP_WSBEiJ_P0061463 Hist1h2af protein_coding protein_coding MGP_WSBEiJ_T0059443.1 MGP_WSBEiJ_G0026403.1 mouse_genomes_project 3 34195673 34202911 - MGP_WSBEiJ_P0059443 Ccna2 protein_coding protein_coding MGP_WSBEiJ_T0059444.1 MGP_WSBEiJ_G0026403.1 mouse_genomes_project 3 34196455 34197672 - Ccna2 protein_coding processed_transcript MGP_WSBEiJ_T0059445.1 MGP_WSBEiJ_G0026403.1 mouse_genomes_project 3 34196799 34202312 - MGP_WSBEiJ_P0059445 Ccna2 protein_coding protein_coding MGP_WSBEiJ_T0059446.1 MGP_WSBEiJ_G0026403.1 mouse_genomes_project 3 34196799 34202688 - MGP_WSBEiJ_P0059446 Ccna2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059447.1 MGP_WSBEiJ_G0026403.1 mouse_genomes_project 3 34201207 34202725 - Ccna2 protein_coding retained_intron MGP_WSBEiJ_T0013798.1 MGP_WSBEiJ_G0011928.1 mouse_genomes_project 3 93064752 93065574 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013543.1 MGP_WSBEiJ_G0011673.1 mouse_genomes_project 3 7267767 7277465 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0058924.1 MGP_WSBEiJ_G0026291.1 mouse_genomes_project 3 4125852 4210608 + MGP_WSBEiJ_P0058924 Pkia protein_coding protein_coding MGP_WSBEiJ_T0058925.1 MGP_WSBEiJ_G0026291.1 mouse_genomes_project 3 4125853 4219118 + MGP_WSBEiJ_P0058925 Pkia protein_coding protein_coding MGP_WSBEiJ_T0058926.1 MGP_WSBEiJ_G0026291.1 mouse_genomes_project 3 4200524 4216165 + MGP_WSBEiJ_P0058926 Pkia protein_coding protein_coding MGP_WSBEiJ_T0013718.1 MGP_WSBEiJ_G0011848.1 mouse_genomes_project 3 64575920 64579764 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010380.1 MGP_WSBEiJ_G0008537.1 mouse_genomes_project 3 129187400 129187469 + Mir302a miRNA miRNA MGP_WSBEiJ_T0061558.1 MGP_WSBEiJ_G0026876.1 mouse_genomes_project 3 97304138 97329338 - MGP_WSBEiJ_P0061558 Bcl9 protein_coding protein_coding MGP_WSBEiJ_T0061559.1 MGP_WSBEiJ_G0026876.1 mouse_genomes_project 3 97305105 97317279 - MGP_WSBEiJ_P0061559 Bcl9 protein_coding protein_coding MGP_WSBEiJ_T0061560.1 MGP_WSBEiJ_G0026876.1 mouse_genomes_project 3 97310941 97314488 - Bcl9 protein_coding processed_transcript MGP_WSBEiJ_T0061561.1 MGP_WSBEiJ_G0026876.1 mouse_genomes_project 3 97314962 97330303 - Bcl9 protein_coding retained_intron MGP_WSBEiJ_T0061562.1 MGP_WSBEiJ_G0026876.1 mouse_genomes_project 3 97317299 97330819 - Bcl9 protein_coding processed_transcript MGP_WSBEiJ_T0061563.1 MGP_WSBEiJ_G0026876.1 mouse_genomes_project 3 97317324 97395861 - Bcl9 protein_coding processed_transcript MGP_WSBEiJ_T0061564.1 MGP_WSBEiJ_G0026876.1 mouse_genomes_project 3 97317324 97329508 - Bcl9 protein_coding processed_transcript MGP_WSBEiJ_T0061565.1 MGP_WSBEiJ_G0026876.1 mouse_genomes_project 3 97323798 97326183 - Bcl9 protein_coding retained_intron MGP_WSBEiJ_T0013805.1 MGP_WSBEiJ_G0011935.1 mouse_genomes_project 3 94714828 94715657 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004163.1 MGP_WSBEiJ_G0003665.1 mouse_genomes_project 3 53228899 53258516 + 4931419H13Rik antisense antisense MGP_WSBEiJ_T0013934.1 MGP_WSBEiJ_G0012064.1 mouse_genomes_project 3 137369041 137369370 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061516.1 MGP_WSBEiJ_G0026867.1 mouse_genomes_project 3 96771043 96773524 - MGP_WSBEiJ_P0061516 Nudt17 protein_coding protein_coding MGP_WSBEiJ_T0061517.1 MGP_WSBEiJ_G0026867.1 mouse_genomes_project 3 96771044 96772220 - Nudt17 protein_coding retained_intron MGP_WSBEiJ_T0061518.1 MGP_WSBEiJ_G0026867.1 mouse_genomes_project 3 96771045 96773539 - MGP_WSBEiJ_P0061518 Nudt17 protein_coding protein_coding MGP_WSBEiJ_T0061519.1 MGP_WSBEiJ_G0026867.1 mouse_genomes_project 3 96771144 96773516 - MGP_WSBEiJ_P0061519 Nudt17 protein_coding protein_coding MGP_WSBEiJ_T0013654.1 MGP_WSBEiJ_G0011784.1 mouse_genomes_project 3 45999090 45999776 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013616.1 MGP_WSBEiJ_G0011746.1 mouse_genomes_project 3 34045491 34046038 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099448.1 MGP_WSBEiJ_G0038111.1 mouse_genomes_project 3 85412910 85412981 - Rnu73b snoRNA snoRNA MGP_WSBEiJ_T0001157.1 MGP_WSBEiJ_G0001089.1 mouse_genomes_project 3 49575095 49577213 - TEC TEC MGP_WSBEiJ_T0060040.1 MGP_WSBEiJ_G0026522.1 mouse_genomes_project 3 66003744 66056071 + MGP_WSBEiJ_P0060040 Gfm1 protein_coding protein_coding MGP_WSBEiJ_T0060041.1 MGP_WSBEiJ_G0026522.1 mouse_genomes_project 3 66003764 66038402 + Gfm1 protein_coding processed_transcript MGP_WSBEiJ_T0060042.1 MGP_WSBEiJ_G0026522.1 mouse_genomes_project 3 66003887 66037650 + MGP_WSBEiJ_P0060042 Gfm1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060043.1 MGP_WSBEiJ_G0026522.1 mouse_genomes_project 3 66036075 66054345 + Gfm1 protein_coding retained_intron MGP_WSBEiJ_T0013602.1 MGP_WSBEiJ_G0011732.1 mouse_genomes_project 3 28232676 28232944 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097330.1 MGP_WSBEiJ_G0036004.1 mouse_genomes_project 3 94217434 94222320 + Gm42463 sense_intronic sense_intronic MGP_WSBEiJ_T0062513.1 MGP_WSBEiJ_G0027092.1 mouse_genomes_project 3 127423400 127506714 - MGP_WSBEiJ_P0062513 Ugt8a protein_coding protein_coding MGP_WSBEiJ_T0062514.1 MGP_WSBEiJ_G0027092.1 mouse_genomes_project 3 127423635 127482755 - MGP_WSBEiJ_P0062514 Ugt8a protein_coding protein_coding MGP_WSBEiJ_T0062515.1 MGP_WSBEiJ_G0027092.1 mouse_genomes_project 3 127481134 127506646 - Ugt8a protein_coding retained_intron MGP_WSBEiJ_T0061593.1 MGP_WSBEiJ_G0026883.1 mouse_genomes_project 3 98061518 98083606 + MGP_WSBEiJ_P0061593 Sec22b protein_coding protein_coding MGP_WSBEiJ_T0061594.1 MGP_WSBEiJ_G0026883.1 mouse_genomes_project 3 98061544 98082166 + MGP_WSBEiJ_P0061594 Sec22b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061595.1 MGP_WSBEiJ_G0026883.1 mouse_genomes_project 3 98061553 98068000 + MGP_WSBEiJ_P0061595 Sec22b protein_coding protein_coding MGP_WSBEiJ_T0061596.1 MGP_WSBEiJ_G0026883.1 mouse_genomes_project 3 98061555 98075534 + MGP_WSBEiJ_P0061596 Sec22b protein_coding protein_coding MGP_WSBEiJ_T0061597.1 MGP_WSBEiJ_G0026883.1 mouse_genomes_project 3 98067289 98068000 + Sec22b protein_coding processed_transcript MGP_WSBEiJ_T0017370.1 MGP_WSBEiJ_G0014929.1 mouse_genomes_project 3 81779424 81782307 - Gm29999 processed_transcript retained_intron MGP_WSBEiJ_T0017371.1 MGP_WSBEiJ_G0014929.1 mouse_genomes_project 3 81779570 81784853 - Gm29999 processed_transcript lincRNA MGP_WSBEiJ_T0001290.1 MGP_WSBEiJ_G0001220.1 mouse_genomes_project 3 128347779 128349627 + TEC TEC MGP_WSBEiJ_T0013758.1 MGP_WSBEiJ_G0011888.1 mouse_genomes_project 3 77164023 77165033 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001280.1 MGP_WSBEiJ_G0001210.1 mouse_genomes_project 3 125213477 125216637 - TEC TEC MGP_WSBEiJ_T0097212.1 MGP_WSBEiJ_G0035893.1 mouse_genomes_project 3 88093377 88093504 + Gm25820 scaRNA scaRNA MGP_WSBEiJ_T0007554.1 MGP_WSBEiJ_G0006184.1 mouse_genomes_project 3 117817170 117817594 + 4930512P04Rik lincRNA lincRNA MGP_WSBEiJ_T0010395.1 MGP_WSBEiJ_G0008552.1 mouse_genomes_project 3 160579426 160579497 + Mir186 miRNA miRNA MGP_WSBEiJ_T0059184.1 MGP_WSBEiJ_G0026358.1 mouse_genomes_project 3 25986822 26020145 + MGP_WSBEiJ_P0059184 Slc2a2 protein_coding protein_coding MGP_WSBEiJ_T0059185.1 MGP_WSBEiJ_G0026358.1 mouse_genomes_project 3 25986936 26016351 + MGP_WSBEiJ_P0059185 Slc2a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059186.1 MGP_WSBEiJ_G0026358.1 mouse_genomes_project 3 26010397 26017200 + Slc2a2 protein_coding retained_intron MGP_WSBEiJ_T0100765.1 MGP_WSBEiJ_G0039223.1 mouse_genomes_project 3 78081719 78082283 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013752.1 MGP_WSBEiJ_G0011882.1 mouse_genomes_project 3 76582261 76583532 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060297.1 MGP_WSBEiJ_G0026584.1 mouse_genomes_project 3 83636451 83675339 - MGP_WSBEiJ_P0060297 Fhdc1 protein_coding protein_coding MGP_WSBEiJ_T0060298.1 MGP_WSBEiJ_G0026584.1 mouse_genomes_project 3 83638291 83674401 - MGP_WSBEiJ_P0060298 Fhdc1 protein_coding protein_coding MGP_WSBEiJ_T0060299.1 MGP_WSBEiJ_G0026584.1 mouse_genomes_project 3 83638364 83675303 - MGP_WSBEiJ_P0060299 Fhdc1 protein_coding protein_coding MGP_WSBEiJ_T0060300.1 MGP_WSBEiJ_G0026584.1 mouse_genomes_project 3 83643061 83648727 - Fhdc1 protein_coding retained_intron MGP_WSBEiJ_T0060301.1 MGP_WSBEiJ_G0026584.1 mouse_genomes_project 3 83669432 83673892 - Fhdc1 protein_coding processed_transcript MGP_WSBEiJ_T0099424.1 MGP_WSBEiJ_G0038087.1 mouse_genomes_project 3 35481850 35481959 - Gm26404 snoRNA snoRNA MGP_WSBEiJ_T0001234.1 MGP_WSBEiJ_G0001164.1 mouse_genomes_project 3 95923644 95926124 + TEC TEC MGP_WSBEiJ_T0062147.1 MGP_WSBEiJ_G0027020.1 mouse_genomes_project 3 109392041 109447063 + MGP_WSBEiJ_P0062147 Wdr47 protein_coding protein_coding MGP_WSBEiJ_T0062148.1 MGP_WSBEiJ_G0027020.1 mouse_genomes_project 3 109392114 109419882 + MGP_WSBEiJ_P0062148 Wdr47 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062149.1 MGP_WSBEiJ_G0027020.1 mouse_genomes_project 3 109392151 109416606 + Wdr47 protein_coding retained_intron MGP_WSBEiJ_T0062150.1 MGP_WSBEiJ_G0027020.1 mouse_genomes_project 3 109420078 109425882 + Wdr47 protein_coding processed_transcript MGP_WSBEiJ_T0062151.1 MGP_WSBEiJ_G0027020.1 mouse_genomes_project 3 109420459 109428705 + Wdr47 protein_coding retained_intron MGP_WSBEiJ_T0062152.1 MGP_WSBEiJ_G0027020.1 mouse_genomes_project 3 109424575 109434293 + Wdr47 protein_coding processed_transcript MGP_WSBEiJ_T0062153.1 MGP_WSBEiJ_G0027020.1 mouse_genomes_project 3 109428353 109439075 + Wdr47 protein_coding retained_intron MGP_WSBEiJ_T0013540.1 MGP_WSBEiJ_G0011670.1 mouse_genomes_project 3 6822954 6823768 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013585.1 MGP_WSBEiJ_G0011715.1 mouse_genomes_project 3 18211980 18212401 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013792.1 MGP_WSBEiJ_G0011922.1 mouse_genomes_project 3 92226984 92227288 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097352.1 MGP_WSBEiJ_G0036026.1 mouse_genomes_project 3 104130347 104131623 + Gm43066 sense_intronic sense_intronic MGP_WSBEiJ_T0060214.1 MGP_WSBEiJ_G0026563.1 mouse_genomes_project 3 80133019 80324537 + MGP_WSBEiJ_P0060214 Pdgfc protein_coding protein_coding MGP_WSBEiJ_T0060215.1 MGP_WSBEiJ_G0026563.1 mouse_genomes_project 3 80133775 80324531 + MGP_WSBEiJ_P0060215 Pdgfc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060216.1 MGP_WSBEiJ_G0026563.1 mouse_genomes_project 3 80134027 80321269 + MGP_WSBEiJ_P0060216 Pdgfc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0061035.1 MGP_WSBEiJ_G0026735.1 mouse_genomes_project 3 92100416 92101724 + MGP_WSBEiJ_P0061035 Sprr2e protein_coding protein_coding MGP_WSBEiJ_T0007512.1 MGP_WSBEiJ_G0006148.1 mouse_genomes_project 3 96385305 96394036 + Gm26553 lincRNA lincRNA MGP_WSBEiJ_T0013725.1 MGP_WSBEiJ_G0011855.1 mouse_genomes_project 3 65525370 65525692 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013981.1 MGP_WSBEiJ_G0012111.1 mouse_genomes_project 3 156649195 156649488 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097324.1 MGP_WSBEiJ_G0035999.1 mouse_genomes_project 3 22834366 22840399 - Gm37573 sense_intronic sense_intronic MGP_WSBEiJ_T0013935.1 MGP_WSBEiJ_G0012065.1 mouse_genomes_project 3 137424340 137424975 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013517.1 MGP_WSBEiJ_G0011647.1 mouse_genomes_project 3 664872 665208 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001107.1 MGP_WSBEiJ_G0001039.1 mouse_genomes_project 3 30885819 30887285 - TEC TEC MGP_WSBEiJ_T0061487.1 MGP_WSBEiJ_G0026861.1 mouse_genomes_project 3 96683931 96687801 + MGP_WSBEiJ_P0061487 Rbm8a protein_coding protein_coding MGP_WSBEiJ_T0061488.1 MGP_WSBEiJ_G0026861.1 mouse_genomes_project 3 96683938 96687801 + MGP_WSBEiJ_P0061488 Rbm8a protein_coding protein_coding MGP_WSBEiJ_T0061489.1 MGP_WSBEiJ_G0026861.1 mouse_genomes_project 3 96683960 96687801 + MGP_WSBEiJ_P0061489 Rbm8a protein_coding protein_coding MGP_WSBEiJ_T0061490.1 MGP_WSBEiJ_G0026861.1 mouse_genomes_project 3 96683971 96684553 + Rbm8a protein_coding retained_intron MGP_WSBEiJ_T0061491.1 MGP_WSBEiJ_G0026861.1 mouse_genomes_project 3 96685220 96685900 + Rbm8a protein_coding retained_intron MGP_WSBEiJ_T0060636.1 MGP_WSBEiJ_G0026653.1 mouse_genomes_project 3 88357629 88367094 - MGP_WSBEiJ_P0060636 Msto1 protein_coding protein_coding MGP_WSBEiJ_T0060637.1 MGP_WSBEiJ_G0026653.1 mouse_genomes_project 3 88361152 88365237 - Msto1 protein_coding retained_intron MGP_WSBEiJ_T0060638.1 MGP_WSBEiJ_G0026653.1 mouse_genomes_project 3 88362778 88367162 - MGP_WSBEiJ_P0060638 Msto1 protein_coding protein_coding MGP_WSBEiJ_T0060639.1 MGP_WSBEiJ_G0026653.1 mouse_genomes_project 3 88362807 88367066 - Msto1 protein_coding retained_intron MGP_WSBEiJ_T0060640.1 MGP_WSBEiJ_G0026653.1 mouse_genomes_project 3 88364521 88367045 - Msto1 protein_coding retained_intron MGP_WSBEiJ_T0063069.1 MGP_WSBEiJ_G0027193.1 mouse_genomes_project 3 147766666 148037851 + MGP_WSBEiJ_P0063069 Col24a1 protein_coding protein_coding MGP_WSBEiJ_T0063070.1 MGP_WSBEiJ_G0027193.1 mouse_genomes_project 3 147766721 147789067 + MGP_WSBEiJ_P0063070 Col24a1 protein_coding protein_coding MGP_WSBEiJ_T0063071.1 MGP_WSBEiJ_G0027193.1 mouse_genomes_project 3 148000618 148023614 + Col24a1 protein_coding processed_transcript MGP_WSBEiJ_T0063072.1 MGP_WSBEiJ_G0027193.1 mouse_genomes_project 3 148030836 148037846 + Col24a1 protein_coding retained_intron MGP_WSBEiJ_T0013691.1 MGP_WSBEiJ_G0011821.1 mouse_genomes_project 3 56538536 56538908 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007402.1 MGP_WSBEiJ_G0006070.1 mouse_genomes_project 3 38215737 38237567 - 1700017G19Rik lincRNA lincRNA MGP_WSBEiJ_T0007403.1 MGP_WSBEiJ_G0006070.1 mouse_genomes_project 3 38219300 38220645 - 1700017G19Rik lincRNA lincRNA MGP_WSBEiJ_T0098169.1 MGP_WSBEiJ_G0036832.1 mouse_genomes_project 3 64349674 64349781 - Gm25755 snRNA snRNA MGP_WSBEiJ_T0004207.1 MGP_WSBEiJ_G0003697.1 mouse_genomes_project 3 91827294 91833420 + Gm43735 antisense antisense MGP_WSBEiJ_T0004222.1 MGP_WSBEiJ_G0003706.1 mouse_genomes_project 3 96161233 96166184 - Gm17690 antisense antisense MGP_WSBEiJ_T0004223.1 MGP_WSBEiJ_G0003706.1 mouse_genomes_project 3 96165144 96166186 - Gm17690 antisense antisense MGP_WSBEiJ_T0001352.1 MGP_WSBEiJ_G0001281.1 mouse_genomes_project 3 157059518 157061763 + TEC TEC MGP_WSBEiJ_T0060195.1 MGP_WSBEiJ_G0026560.1 mouse_genomes_project 3 78942083 79005785 + MGP_WSBEiJ_P0060195 Fam198b protein_coding protein_coding MGP_WSBEiJ_T0060196.1 MGP_WSBEiJ_G0026560.1 mouse_genomes_project 3 78942147 78996230 + MGP_WSBEiJ_P0060196 Fam198b protein_coding protein_coding MGP_WSBEiJ_T0060197.1 MGP_WSBEiJ_G0026560.1 mouse_genomes_project 3 78942481 78944900 + MGP_WSBEiJ_P0060197 Fam198b protein_coding protein_coding MGP_WSBEiJ_T0060198.1 MGP_WSBEiJ_G0026560.1 mouse_genomes_project 3 78944586 79005783 + MGP_WSBEiJ_P0060198 Fam198b protein_coding protein_coding MGP_WSBEiJ_T0060199.1 MGP_WSBEiJ_G0026560.1 mouse_genomes_project 3 78944712 78948302 + Fam198b protein_coding retained_intron MGP_WSBEiJ_T0060415.1 MGP_WSBEiJ_G0026612.1 mouse_genomes_project 3 87184585 87190602 + MGP_WSBEiJ_P0060415 Sh2d2a protein_coding protein_coding MGP_WSBEiJ_T0060416.1 MGP_WSBEiJ_G0026612.1 mouse_genomes_project 3 87184835 87193543 + MGP_WSBEiJ_P0060416 Sh2d2a protein_coding protein_coding MGP_WSBEiJ_T0060417.1 MGP_WSBEiJ_G0026612.1 mouse_genomes_project 3 87184841 87187767 + Sh2d2a protein_coding retained_intron MGP_WSBEiJ_T0013712.1 MGP_WSBEiJ_G0011842.1 mouse_genomes_project 3 62281973 62282927 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059302.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 29977818 30038278 + MGP_WSBEiJ_P0059302 protein_coding protein_coding MGP_WSBEiJ_T0059303.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 29977884 29998228 + protein_coding retained_intron MGP_WSBEiJ_T0059304.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 29977892 29997941 + MGP_WSBEiJ_P0059304 protein_coding protein_coding MGP_WSBEiJ_T0059305.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 29979898 29995379 + MGP_WSBEiJ_P0059305 protein_coding protein_coding MGP_WSBEiJ_T0059306.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 29979907 30036392 + MGP_WSBEiJ_P0059306 protein_coding protein_coding MGP_WSBEiJ_T0059307.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 29997776 30016932 + protein_coding retained_intron MGP_WSBEiJ_T0059308.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 30006673 30019289 + protein_coding retained_intron MGP_WSBEiJ_T0059309.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 30015332 30026182 + MGP_WSBEiJ_P0059309 protein_coding protein_coding MGP_WSBEiJ_T0059310.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 30016694 30019687 + protein_coding retained_intron MGP_WSBEiJ_T0059311.1 MGP_WSBEiJ_G0026381.1 mouse_genomes_project 3 30031948 30036196 + protein_coding retained_intron MGP_WSBEiJ_T0098204.1 MGP_WSBEiJ_G0036867.1 mouse_genomes_project 3 105185969 105186051 - Gm26091 snRNA snRNA MGP_WSBEiJ_T0098171.1 MGP_WSBEiJ_G0036834.1 mouse_genomes_project 3 67164336 67164525 - Gm22073 snRNA snRNA MGP_WSBEiJ_T0007468.1 MGP_WSBEiJ_G0006118.1 mouse_genomes_project 3 80128394 80130424 + lincRNA lincRNA MGP_WSBEiJ_T0013849.1 MGP_WSBEiJ_G0011979.1 mouse_genomes_project 3 106733219 106733535 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013797.1 MGP_WSBEiJ_G0011927.1 mouse_genomes_project 3 93016620 93018147 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060017.1 MGP_WSBEiJ_G0026517.1 mouse_genomes_project 3 64645437 64885689 - MGP_WSBEiJ_P0060017 Veph1 protein_coding protein_coding MGP_WSBEiJ_T0060018.1 MGP_WSBEiJ_G0026517.1 mouse_genomes_project 3 64648235 64735210 - Veph1 protein_coding processed_transcript MGP_WSBEiJ_T0060021.1 MGP_WSBEiJ_G0026517.1 mouse_genomes_project 3 64837142 64885600 - Veph1 protein_coding retained_intron MGP_WSBEiJ_T0058969.1 MGP_WSBEiJ_G0026306.1 mouse_genomes_project 3 7164815 7226891 - MGP_WSBEiJ_P0058969 Fabp12 protein_coding protein_coding MGP_WSBEiJ_T0058970.1 MGP_WSBEiJ_G0026306.1 mouse_genomes_project 3 7166524 7178061 - MGP_WSBEiJ_P0058970 Fabp12 protein_coding protein_coding MGP_WSBEiJ_T0058971.1 MGP_WSBEiJ_G0026306.1 mouse_genomes_project 3 7166524 7178034 - MGP_WSBEiJ_P0058971 Fabp12 protein_coding protein_coding MGP_WSBEiJ_T0058972.1 MGP_WSBEiJ_G0026306.1 mouse_genomes_project 3 7166557 7226882 - MGP_WSBEiJ_P0058972 Fabp12 protein_coding protein_coding MGP_WSBEiJ_T0007331.1 MGP_WSBEiJ_G0006016.1 mouse_genomes_project 3 2283496 2285835 - 4930555M17Rik lincRNA lincRNA MGP_WSBEiJ_T0063292.1 MGP_WSBEiJ_G0027230.1 mouse_genomes_project 3 156068084 156624695 - MGP_WSBEiJ_P0063292 St6galnac3 protein_coding protein_coding MGP_WSBEiJ_T0063293.1 MGP_WSBEiJ_G0027230.1 mouse_genomes_project 3 156075183 156099776 - MGP_WSBEiJ_P0063293 St6galnac3 protein_coding protein_coding MGP_WSBEiJ_T0063294.1 MGP_WSBEiJ_G0027230.1 mouse_genomes_project 3 156076434 156624634 - MGP_WSBEiJ_P0063294 St6galnac3 protein_coding protein_coding MGP_WSBEiJ_T0063295.1 MGP_WSBEiJ_G0027230.1 mouse_genomes_project 3 156397681 156398547 - St6galnac3 protein_coding retained_intron MGP_WSBEiJ_T0063296.1 MGP_WSBEiJ_G0027230.1 mouse_genomes_project 3 156397936 156620517 - St6galnac3 protein_coding retained_intron MGP_WSBEiJ_T0007451.1 MGP_WSBEiJ_G0006105.1 mouse_genomes_project 3 69466183 69502939 - Gm6634 lincRNA lincRNA MGP_WSBEiJ_T0013711.1 MGP_WSBEiJ_G0011841.1 mouse_genomes_project 3 62264669 62265319 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001271.1 MGP_WSBEiJ_G0001201.1 mouse_genomes_project 3 123157768 123161369 - TEC TEC MGP_WSBEiJ_T0001261.1 MGP_WSBEiJ_G0001191.1 mouse_genomes_project 3 118132890 118136843 - TEC TEC MGP_WSBEiJ_T0060811.1 MGP_WSBEiJ_G0026682.1 mouse_genomes_project 3 88912268 88923981 + MGP_WSBEiJ_P0060811 Shc1 protein_coding protein_coding MGP_WSBEiJ_T0060812.1 MGP_WSBEiJ_G0026682.1 mouse_genomes_project 3 88912288 88920480 + MGP_WSBEiJ_P0060812 Shc1 protein_coding protein_coding MGP_WSBEiJ_T0060813.1 MGP_WSBEiJ_G0026682.1 mouse_genomes_project 3 88912311 88924137 + MGP_WSBEiJ_P0060813 Shc1 protein_coding protein_coding MGP_WSBEiJ_T0060814.1 MGP_WSBEiJ_G0026682.1 mouse_genomes_project 3 88916869 88920279 + Shc1 protein_coding retained_intron MGP_WSBEiJ_T0060815.1 MGP_WSBEiJ_G0026682.1 mouse_genomes_project 3 88917864 88928791 + MGP_WSBEiJ_P0060815 Shc1 protein_coding protein_coding MGP_WSBEiJ_T0060816.1 MGP_WSBEiJ_G0026682.1 mouse_genomes_project 3 88917878 88924137 + MGP_WSBEiJ_P0060816 Shc1 protein_coding protein_coding MGP_WSBEiJ_T0060817.1 MGP_WSBEiJ_G0026682.1 mouse_genomes_project 3 88918087 88929491 + MGP_WSBEiJ_P0060817 Shc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0060818.1 MGP_WSBEiJ_G0026682.1 mouse_genomes_project 3 88920761 88924793 + Shc1 protein_coding processed_transcript MGP_WSBEiJ_T0013813.1 MGP_WSBEiJ_G0011943.1 mouse_genomes_project 3 96080250 96080436 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0062225.1 MGP_WSBEiJ_G0027034.1 mouse_genomes_project 3 111115618 111120509 - MGP_WSBEiJ_P0062225 Prmt6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0062226.1 MGP_WSBEiJ_G0027034.1 mouse_genomes_project 3 111115621 111120504 - MGP_WSBEiJ_P0062226 Prmt6 protein_coding protein_coding MGP_WSBEiJ_T0062227.1 MGP_WSBEiJ_G0027034.1 mouse_genomes_project 3 111118058 111120509 - MGP_WSBEiJ_P0062227 Prmt6 protein_coding protein_coding MGP_WSBEiJ_T0007431.1 MGP_WSBEiJ_G0006090.1 mouse_genomes_project 3 51839034 51858053 + C820005J03Rik lincRNA lincRNA MGP_WSBEiJ_T0013966.1 MGP_WSBEiJ_G0012096.1 mouse_genomes_project 3 147154770 147156444 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013514.1 MGP_WSBEiJ_G0011644.1 mouse_genomes_project 3 528729 529131 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099477.1 MGP_WSBEiJ_G0038140.1 mouse_genomes_project 3 132689776 132689904 - Gm26090 snoRNA snoRNA MGP_WSBEiJ_T0062287.1 MGP_WSBEiJ_G0027049.1 mouse_genomes_project 3 117710622 117720704 + Lrrc39 protein_coding retained_intron MGP_WSBEiJ_T0062288.1 MGP_WSBEiJ_G0027049.1 mouse_genomes_project 3 117710627 117734141 + MGP_WSBEiJ_P0062288 Lrrc39 protein_coding protein_coding MGP_WSBEiJ_T0013669.1 MGP_WSBEiJ_G0011799.1 mouse_genomes_project 3 48180025 48180257 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100770.1 MGP_WSBEiJ_G0039228.1 mouse_genomes_project 3 79250781 79250932 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013689.1 MGP_WSBEiJ_G0011819.1 mouse_genomes_project 3 56159857 56160091 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007465.1 MGP_WSBEiJ_G0006115.1 mouse_genomes_project 3 79111067 79268898 + A330069K06Rik lincRNA lincRNA MGP_WSBEiJ_T0009316.1 MGP_WSBEiJ_G0007473.1 mouse_genomes_project 3 147420618 147431988 + Gm43742 macro_lncRNA macro_lncRNA MGP_WSBEiJ_T0061284.1 MGP_WSBEiJ_G0026813.1 mouse_genomes_project 3 95166121 95171615 - MGP_WSBEiJ_P0061284 Gm128 protein_coding protein_coding MGP_WSBEiJ_T0061285.1 MGP_WSBEiJ_G0026813.1 mouse_genomes_project 3 95166308 95171615 - MGP_WSBEiJ_P0061285 Gm128 protein_coding protein_coding MGP_WSBEiJ_T0001129.1 MGP_WSBEiJ_G0001061.1 mouse_genomes_project 3 38489329 38490297 - TEC TEC MGP_WSBEiJ_T0061899.1 MGP_WSBEiJ_G0026955.1 mouse_genomes_project 3 106074450 106303557 + MGP_WSBEiJ_P0061899 Kcnd3 protein_coding protein_coding MGP_WSBEiJ_T0061900.1 MGP_WSBEiJ_G0026955.1 mouse_genomes_project 3 106074707 106297143 + Kcnd3 protein_coding retained_intron MGP_WSBEiJ_T0061901.1 MGP_WSBEiJ_G0026955.1 mouse_genomes_project 3 106075220 106299015 + MGP_WSBEiJ_P0061901 Kcnd3 protein_coding protein_coding MGP_WSBEiJ_T0061902.1 MGP_WSBEiJ_G0026955.1 mouse_genomes_project 3 106080905 106298864 + MGP_WSBEiJ_P0061902 Kcnd3 protein_coding protein_coding MGP_WSBEiJ_T0061903.1 MGP_WSBEiJ_G0026955.1 mouse_genomes_project 3 106298559 106299399 + Kcnd3 protein_coding processed_transcript MGP_WSBEiJ_T0097041.1 MGP_WSBEiJ_G0035722.1 mouse_genomes_project 3 22677386 22677494 + Gm22832 rRNA rRNA MGP_WSBEiJ_T0013614.1 MGP_WSBEiJ_G0011744.1 mouse_genomes_project 3 33835529 33836472 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004130.1 MGP_WSBEiJ_G0003641.1 mouse_genomes_project 3 28084983 28091202 + Gm15462 antisense antisense MGP_WSBEiJ_T0060930.1 MGP_WSBEiJ_G0026702.1 mouse_genomes_project 3 89831635 89841594 + MGP_WSBEiJ_P0060930 Crtc2 protein_coding protein_coding MGP_WSBEiJ_T0060931.1 MGP_WSBEiJ_G0026702.1 mouse_genomes_project 3 89831768 89841589 + Crtc2 protein_coding retained_intron MGP_WSBEiJ_T0060932.1 MGP_WSBEiJ_G0026702.1 mouse_genomes_project 3 89831768 89841589 + Crtc2 protein_coding retained_intron MGP_WSBEiJ_T0060933.1 MGP_WSBEiJ_G0026702.1 mouse_genomes_project 3 89831796 89836102 + Crtc2 protein_coding retained_intron MGP_WSBEiJ_T0060934.1 MGP_WSBEiJ_G0026702.1 mouse_genomes_project 3 89831813 89841589 + Crtc2 protein_coding processed_transcript MGP_WSBEiJ_T0060935.1 MGP_WSBEiJ_G0026702.1 mouse_genomes_project 3 89834761 89841589 + MGP_WSBEiJ_P0060935 Crtc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0060936.1 MGP_WSBEiJ_G0026702.1 mouse_genomes_project 3 89835517 89836961 + Crtc2 protein_coding retained_intron MGP_WSBEiJ_T0060937.1 MGP_WSBEiJ_G0026702.1 mouse_genomes_project 3 89836433 89837790 + Crtc2 protein_coding retained_intron MGP_WSBEiJ_T0013884.1 MGP_WSBEiJ_G0012014.1 mouse_genomes_project 3 118196361 118197091 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007392.1 MGP_WSBEiJ_G0006062.1 mouse_genomes_project 3 35284210 35285577 + 4930594O21Rik lincRNA lincRNA MGP_WSBEiJ_T0007393.1 MGP_WSBEiJ_G0006062.1 mouse_genomes_project 3 35284220 35285127 + 4930594O21Rik lincRNA lincRNA MGP_WSBEiJ_T0004273.1 MGP_WSBEiJ_G0003735.1 mouse_genomes_project 3 117497824 117500606 + Gm29151 antisense antisense MGP_WSBEiJ_T0062864.1 MGP_WSBEiJ_G0027150.1 mouse_genomes_project 3 139551179 139553757 - protein_coding lincRNA MGP_WSBEiJ_T0013799.1 MGP_WSBEiJ_G0011929.1 mouse_genomes_project 3 93084424 93084879 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004213.1 MGP_WSBEiJ_G0003702.1 mouse_genomes_project 3 94911527 94918475 - Gm15265 antisense antisense MGP_WSBEiJ_T0004214.1 MGP_WSBEiJ_G0003702.1 mouse_genomes_project 3 94911561 94918898 - Gm15265 antisense antisense MGP_WSBEiJ_T0010330.1 MGP_WSBEiJ_G0008487.1 mouse_genomes_project 3 24212444 24212582 - Gm44464 miRNA miRNA MGP_WSBEiJ_T0007542.1 MGP_WSBEiJ_G0006173.1 mouse_genomes_project 3 108563287 108576745 - Gm36211 lincRNA lincRNA MGP_WSBEiJ_T0062690.1 MGP_WSBEiJ_G0027119.1 mouse_genomes_project 3 132535568 132539074 - MGP_WSBEiJ_P0062690 Rpl34 protein_coding protein_coding MGP_WSBEiJ_T0062691.1 MGP_WSBEiJ_G0027119.1 mouse_genomes_project 3 132535571 132536144 - Rpl34 protein_coding retained_intron MGP_WSBEiJ_T0062692.1 MGP_WSBEiJ_G0027119.1 mouse_genomes_project 3 132535576 132539135 - MGP_WSBEiJ_P0062692 Rpl34 protein_coding protein_coding MGP_WSBEiJ_T0062693.1 MGP_WSBEiJ_G0027119.1 mouse_genomes_project 3 132535601 132539079 - Rpl34 protein_coding retained_intron MGP_WSBEiJ_T0062694.1 MGP_WSBEiJ_G0027119.1 mouse_genomes_project 3 132535613 132539058 - MGP_WSBEiJ_P0062694 Rpl34 protein_coding protein_coding MGP_WSBEiJ_T0062695.1 MGP_WSBEiJ_G0027119.1 mouse_genomes_project 3 132537069 132539071 - MGP_WSBEiJ_P0062695 Rpl34 protein_coding protein_coding MGP_WSBEiJ_T0062696.1 MGP_WSBEiJ_G0027119.1 mouse_genomes_project 3 132537304 132539084 - Rpl34 protein_coding retained_intron MGP_WSBEiJ_T0062697.1 MGP_WSBEiJ_G0027119.1 mouse_genomes_project 3 132537575 132539083 - MGP_WSBEiJ_P0062697 Rpl34 protein_coding protein_coding MGP_WSBEiJ_T0013649.1 MGP_WSBEiJ_G0011779.1 mouse_genomes_project 3 44489101 44489343 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007628.1 MGP_WSBEiJ_G0006245.1 mouse_genomes_project 3 146109210 146111119 + Gm42706 lincRNA lincRNA MGP_WSBEiJ_T0013560.1 MGP_WSBEiJ_G0011690.1 mouse_genomes_project 3 11610196 11610485 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004299.1 MGP_WSBEiJ_G0003756.1 mouse_genomes_project 3 135392761 135434756 + Gm42567 antisense antisense MGP_WSBEiJ_T0060819.1 MGP_WSBEiJ_G0026683.1 mouse_genomes_project 3 88929683 88932213 + Pygo2 protein_coding processed_transcript MGP_WSBEiJ_T0060820.1 MGP_WSBEiJ_G0026683.1 mouse_genomes_project 3 88929730 88934598 + MGP_WSBEiJ_P0060820 Pygo2 protein_coding protein_coding MGP_WSBEiJ_T0060821.1 MGP_WSBEiJ_G0026683.1 mouse_genomes_project 3 88929893 88930639 + Pygo2 protein_coding processed_transcript MGP_WSBEiJ_T0060822.1 MGP_WSBEiJ_G0026683.1 mouse_genomes_project 3 88930209 88932152 + Pygo2 protein_coding processed_transcript MGP_WSBEiJ_T0060823.1 MGP_WSBEiJ_G0026683.1 mouse_genomes_project 3 88930306 88934598 + MGP_WSBEiJ_P0060823 Pygo2 protein_coding protein_coding MGP_WSBEiJ_T0060824.1 MGP_WSBEiJ_G0026683.1 mouse_genomes_project 3 88930501 88932462 + Pygo2 protein_coding processed_transcript MGP_WSBEiJ_T0060463.1 MGP_WSBEiJ_G0026623.1 mouse_genomes_project 3 87410811 87412792 - MGP_WSBEiJ_P0060463 Apoa1bp protein_coding protein_coding MGP_WSBEiJ_T0059722.1 MGP_WSBEiJ_G0026451.1 mouse_genomes_project 3 51943984 51949846 - Ufm1 protein_coding retained_intron MGP_WSBEiJ_T0059723.1 MGP_WSBEiJ_G0026451.1 mouse_genomes_project 3 51944031 51950431 - MGP_WSBEiJ_P0059723 Ufm1 protein_coding protein_coding MGP_WSBEiJ_T0059724.1 MGP_WSBEiJ_G0026451.1 mouse_genomes_project 3 51944105 51949919 - MGP_WSBEiJ_P0059724 Ufm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0059725.1 MGP_WSBEiJ_G0026451.1 mouse_genomes_project 3 51944973 51949923 - MGP_WSBEiJ_P0059725 Ufm1 protein_coding protein_coding MGP_WSBEiJ_T0059726.1 MGP_WSBEiJ_G0026451.1 mouse_genomes_project 3 51945778 51949919 - Ufm1 protein_coding retained_intron MGP_WSBEiJ_T0013542.1 MGP_WSBEiJ_G0011672.1 mouse_genomes_project 3 7236218 7236397 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013776.1 MGP_WSBEiJ_G0011906.1 mouse_genomes_project 3 86230637 86230933 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0059038.1 MGP_WSBEiJ_G0026332.1 mouse_genomes_project 3 16196802 16240373 - MGP_WSBEiJ_P0059038 Armc1 protein_coding protein_coding MGP_WSBEiJ_T0013618.1 MGP_WSBEiJ_G0011748.1 mouse_genomes_project 3 34332685 34332937 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013673.1 MGP_WSBEiJ_G0011803.1 mouse_genomes_project 3 49588617 49588930 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0060843.1 MGP_WSBEiJ_G0026688.1 mouse_genomes_project 3 89265366 89283859 - MGP_WSBEiJ_P0060843 Chrnb2 protein_coding protein_coding MGP_WSBEiJ_T0060844.1 MGP_WSBEiJ_G0026688.1 mouse_genomes_project 3 89271684 89282652 - Chrnb2 protein_coding processed_transcript MGP_WSBEiJ_T0060845.1 MGP_WSBEiJ_G0026688.1 mouse_genomes_project 3 89271684 89283883 - MGP_WSBEiJ_P0060845 Chrnb2 protein_coding protein_coding MGP_WSBEiJ_T0098176.1 MGP_WSBEiJ_G0036839.1 mouse_genomes_project 3 85232121 85232183 - Gm24501 snRNA snRNA MGP_WSBEiJ_T0013833.1 MGP_WSBEiJ_G0011963.1 mouse_genomes_project 3 102530758 102531035 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013721.1 MGP_WSBEiJ_G0011851.1 mouse_genomes_project 3 64727715 64728471 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013964.1 MGP_WSBEiJ_G0012094.1 mouse_genomes_project 3 147000389 147000951 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0061094.1 MGP_WSBEiJ_G0026781.1 mouse_genomes_project 3 94111350 94134710 + MGP_WSBEiJ_P0061094 Them4 protein_coding protein_coding MGP_WSBEiJ_T0061095.1 MGP_WSBEiJ_G0026781.1 mouse_genomes_project 3 94111391 94119435 + Them4 protein_coding retained_intron MGP_WSBEiJ_T0061096.1 MGP_WSBEiJ_G0026781.1 mouse_genomes_project 3 94111397 94127304 + Them4 protein_coding retained_intron MGP_WSBEiJ_T0013716.1 MGP_WSBEiJ_G0011846.1 mouse_genomes_project 3 64521114 64521538 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010406.1 MGP_WSBEiJ_G0008563.1 mouse_genomes_project 4 22734604 22734714 - Gm26067 miRNA miRNA MGP_WSBEiJ_T0098302.1 MGP_WSBEiJ_G0036965.1 mouse_genomes_project 4 133745069 133745176 - Gm24913 snRNA snRNA MGP_WSBEiJ_T0067324.1 MGP_WSBEiJ_G0028129.1 mouse_genomes_project 4 135220290 135234059 - MGP_WSBEiJ_P0067324 protein_coding protein_coding MGP_WSBEiJ_T0067325.1 MGP_WSBEiJ_G0028129.1 mouse_genomes_project 4 135220290 135234715 - MGP_WSBEiJ_P0067325 protein_coding protein_coding MGP_WSBEiJ_T0067326.1 MGP_WSBEiJ_G0028129.1 mouse_genomes_project 4 135220291 135234073 - MGP_WSBEiJ_P0067326 protein_coding protein_coding MGP_WSBEiJ_T0067327.1 MGP_WSBEiJ_G0028129.1 mouse_genomes_project 4 135223812 135234045 - MGP_WSBEiJ_P0067327 protein_coding protein_coding MGP_WSBEiJ_T0067328.1 MGP_WSBEiJ_G0028129.1 mouse_genomes_project 4 135224625 135234070 - MGP_WSBEiJ_P0067328 protein_coding protein_coding MGP_WSBEiJ_T0067329.1 MGP_WSBEiJ_G0028129.1 mouse_genomes_project 4 135230391 135234045 - protein_coding processed_transcript MGP_WSBEiJ_T0014142.1 MGP_WSBEiJ_G0012272.1 mouse_genomes_project 4 52395072 52395279 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099529.1 MGP_WSBEiJ_G0038192.1 mouse_genomes_project 4 61306789 61306922 + Gm24117 snoRNA snoRNA MGP_WSBEiJ_T0014375.1 MGP_WSBEiJ_G0012505.1 mouse_genomes_project 4 137706157 137706646 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066522.1 MGP_WSBEiJ_G0027958.1 mouse_genomes_project 4 125004906 125008755 + MGP_WSBEiJ_P0066522 Pou3f1 protein_coding protein_coding MGP_WSBEiJ_T0014353.1 MGP_WSBEiJ_G0012483.1 mouse_genomes_project 4 127959082 127959502 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014328.1 MGP_WSBEiJ_G0012458.1 mouse_genomes_project 4 121385029 121385402 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014003.1 MGP_WSBEiJ_G0012133.1 mouse_genomes_project 4 5277501 5278451 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067073.1 MGP_WSBEiJ_G0028076.1 mouse_genomes_project 4 133066966 133068156 - MGP_WSBEiJ_P0067073 Rab42 protein_coding protein_coding MGP_WSBEiJ_T0014060.1 MGP_WSBEiJ_G0012190.1 mouse_genomes_project 4 23491862 23492540 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064378.1 MGP_WSBEiJ_G0027454.1 mouse_genomes_project 4 42736296 42757383 - MGP_WSBEiJ_P0064378 Zbtb5 protein_coding protein_coding MGP_WSBEiJ_T0064379.1 MGP_WSBEiJ_G0027454.1 mouse_genomes_project 4 42736299 42757401 - MGP_WSBEiJ_P0064379 Zbtb5 protein_coding protein_coding MGP_WSBEiJ_T0064380.1 MGP_WSBEiJ_G0027454.1 mouse_genomes_project 4 42740986 42757134 - MGP_WSBEiJ_P0064380 Zbtb5 protein_coding protein_coding MGP_WSBEiJ_T0065571.1 MGP_WSBEiJ_G0027750.1 mouse_genomes_project 4 107072609 107087977 - MGP_WSBEiJ_P0065571 Dio1 protein_coding protein_coding MGP_WSBEiJ_T0065572.1 MGP_WSBEiJ_G0027750.1 mouse_genomes_project 4 107073311 107087950 - MGP_WSBEiJ_P0065572 Dio1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065573.1 MGP_WSBEiJ_G0027750.1 mouse_genomes_project 4 107073478 107087932 - MGP_WSBEiJ_P0065573 Dio1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065574.1 MGP_WSBEiJ_G0027750.1 mouse_genomes_project 4 107073482 107087932 - MGP_WSBEiJ_P0065574 Dio1 protein_coding protein_coding MGP_WSBEiJ_T0065575.1 MGP_WSBEiJ_G0027750.1 mouse_genomes_project 4 107073512 107087926 - MGP_WSBEiJ_P0065575 Dio1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065576.1 MGP_WSBEiJ_G0027750.1 mouse_genomes_project 4 107073512 107087926 - MGP_WSBEiJ_P0065576 Dio1 protein_coding protein_coding MGP_WSBEiJ_T0065577.1 MGP_WSBEiJ_G0027750.1 mouse_genomes_project 4 107073512 107087926 - MGP_WSBEiJ_P0065577 Dio1 protein_coding protein_coding MGP_WSBEiJ_T0065578.1 MGP_WSBEiJ_G0027750.1 mouse_genomes_project 4 107080832 107087874 - Dio1 protein_coding processed_transcript MGP_WSBEiJ_T0067223.1 MGP_WSBEiJ_G0028111.1 mouse_genomes_project 4 134552421 134565610 - MGP_WSBEiJ_P0067223 Pigv protein_coding protein_coding MGP_WSBEiJ_T0067224.1 MGP_WSBEiJ_G0028111.1 mouse_genomes_project 4 134555312 134565610 - MGP_WSBEiJ_P0067224 Pigv protein_coding protein_coding MGP_WSBEiJ_T0067225.1 MGP_WSBEiJ_G0028111.1 mouse_genomes_project 4 134561709 134565610 - Pigv protein_coding processed_transcript MGP_WSBEiJ_T0007809.1 MGP_WSBEiJ_G0006387.1 mouse_genomes_project 4 115635278 115639086 + Gm12847 lincRNA lincRNA MGP_WSBEiJ_T0065467.1 MGP_WSBEiJ_G0027728.1 mouse_genomes_project 4 105273073 105274992 + MGP_WSBEiJ_P0065467 Rpl15 protein_coding protein_coding MGP_WSBEiJ_T0064298.1 MGP_WSBEiJ_G0027443.1 mouse_genomes_project 4 41521731 41527245 + MGP_WSBEiJ_P0064298 Olfr155 protein_coding protein_coding MGP_WSBEiJ_T0064299.1 MGP_WSBEiJ_G0027443.1 mouse_genomes_project 4 41524507 41527438 + MGP_WSBEiJ_P0064299 Olfr155 protein_coding protein_coding MGP_WSBEiJ_T0067186.1 MGP_WSBEiJ_G0028100.1 mouse_genomes_project 4 134111347 134125866 - MGP_WSBEiJ_P0067186 Tmem222 protein_coding protein_coding MGP_WSBEiJ_T0067187.1 MGP_WSBEiJ_G0028100.1 mouse_genomes_project 4 134112132 134125736 - MGP_WSBEiJ_P0067187 Tmem222 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067188.1 MGP_WSBEiJ_G0028100.1 mouse_genomes_project 4 134112178 134125844 - MGP_WSBEiJ_P0067188 Tmem222 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067189.1 MGP_WSBEiJ_G0028100.1 mouse_genomes_project 4 134112189 134125692 - MGP_WSBEiJ_P0067189 Tmem222 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067190.1 MGP_WSBEiJ_G0028100.1 mouse_genomes_project 4 134112204 134115409 - Tmem222 protein_coding retained_intron MGP_WSBEiJ_T0067191.1 MGP_WSBEiJ_G0028100.1 mouse_genomes_project 4 134116184 134125825 - Tmem222 protein_coding retained_intron MGP_WSBEiJ_T0004414.1 MGP_WSBEiJ_G0003839.1 mouse_genomes_project 4 106326041 106328051 - Gm12744 antisense antisense MGP_WSBEiJ_T0067389.1 MGP_WSBEiJ_G0028145.1 mouse_genomes_project 4 135935745 135942366 + MGP_WSBEiJ_P0067389 Syf2 protein_coding protein_coding MGP_WSBEiJ_T0067390.1 MGP_WSBEiJ_G0028145.1 mouse_genomes_project 4 135935749 135939897 + Syf2 protein_coding retained_intron MGP_WSBEiJ_T0067391.1 MGP_WSBEiJ_G0028145.1 mouse_genomes_project 4 135935857 135940926 + Syf2 protein_coding retained_intron MGP_WSBEiJ_T0014178.1 MGP_WSBEiJ_G0012308.1 mouse_genomes_project 4 69815589 69816060 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067690.1 MGP_WSBEiJ_G0028216.1 mouse_genomes_project 4 140350468 140368109 + MGP_WSBEiJ_P0067690 Tmco4 protein_coding protein_coding MGP_WSBEiJ_T0067691.1 MGP_WSBEiJ_G0028216.1 mouse_genomes_project 4 140350472 140435393 + MGP_WSBEiJ_P0067691 Tmco4 protein_coding protein_coding MGP_WSBEiJ_T0067692.1 MGP_WSBEiJ_G0028216.1 mouse_genomes_project 4 140350485 140435389 + MGP_WSBEiJ_P0067692 Tmco4 protein_coding protein_coding MGP_WSBEiJ_T0067693.1 MGP_WSBEiJ_G0028216.1 mouse_genomes_project 4 140350489 140411031 + Tmco4 protein_coding processed_transcript MGP_WSBEiJ_T0067658.1 MGP_WSBEiJ_G0028205.1 mouse_genomes_project 4 139767110 139775671 + MGP_WSBEiJ_P0067658 Camk2n1 protein_coding protein_coding MGP_WSBEiJ_T0065713.1 MGP_WSBEiJ_G0027773.1 mouse_genomes_project 4 108572120 108637273 + MGP_WSBEiJ_P0065713 3110021N24Rik protein_coding protein_coding MGP_WSBEiJ_T0065694.1 MGP_WSBEiJ_G0027769.1 mouse_genomes_project 4 108415666 108419514 - Prpf38a protein_coding processed_transcript MGP_WSBEiJ_T0065695.1 MGP_WSBEiJ_G0027769.1 mouse_genomes_project 4 108417364 108434557 - MGP_WSBEiJ_P0065695 Prpf38a protein_coding protein_coding MGP_WSBEiJ_T0065696.1 MGP_WSBEiJ_G0027769.1 mouse_genomes_project 4 108417367 108428406 - Prpf38a protein_coding processed_transcript MGP_WSBEiJ_T0014231.1 MGP_WSBEiJ_G0012361.1 mouse_genomes_project 4 89772574 89773326 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064978.1 MGP_WSBEiJ_G0027611.1 mouse_genomes_project 4 81308707 81528057 - MGP_WSBEiJ_P0064978 Nfib protein_coding protein_coding MGP_WSBEiJ_T0064979.1 MGP_WSBEiJ_G0027611.1 mouse_genomes_project 4 81339411 81525108 - Nfib protein_coding retained_intron MGP_WSBEiJ_T0064980.1 MGP_WSBEiJ_G0027611.1 mouse_genomes_project 4 81341192 81525108 - Nfib protein_coding retained_intron MGP_WSBEiJ_T0064981.1 MGP_WSBEiJ_G0027611.1 mouse_genomes_project 4 81365893 81525562 - Nfib protein_coding retained_intron MGP_WSBEiJ_T0064982.1 MGP_WSBEiJ_G0027611.1 mouse_genomes_project 4 81515775 81525577 - Nfib protein_coding retained_intron MGP_WSBEiJ_T0064983.1 MGP_WSBEiJ_G0027611.1 mouse_genomes_project 4 81518112 81729434 - MGP_WSBEiJ_P0064983 Nfib protein_coding protein_coding MGP_WSBEiJ_T0064984.1 MGP_WSBEiJ_G0027611.1 mouse_genomes_project 4 81518335 81519108 - Nfib protein_coding processed_transcript MGP_WSBEiJ_T0067959.1 MGP_WSBEiJ_G0028290.1 mouse_genomes_project 4 146321098 146331008 + MGP_WSBEiJ_P0067959 9430007A20Rik protein_coding protein_coding MGP_WSBEiJ_T0067652.1 MGP_WSBEiJ_G0028202.1 mouse_genomes_project 4 139634427 139639647 - Cda protein_coding retained_intron MGP_WSBEiJ_T0067653.1 MGP_WSBEiJ_G0028202.1 mouse_genomes_project 4 139634531 139668863 - MGP_WSBEiJ_P0067653 Cda protein_coding protein_coding MGP_WSBEiJ_T0063685.1 MGP_WSBEiJ_G0027308.1 mouse_genomes_project 4 14675901 14957697 + MGP_WSBEiJ_P0063685 Mmp16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063686.1 MGP_WSBEiJ_G0027308.1 mouse_genomes_project 4 14676099 14831028 + MGP_WSBEiJ_P0063686 Mmp16 protein_coding protein_coding MGP_WSBEiJ_T0063687.1 MGP_WSBEiJ_G0027308.1 mouse_genomes_project 4 14676456 14959385 + MGP_WSBEiJ_P0063687 Mmp16 protein_coding protein_coding MGP_WSBEiJ_T0063688.1 MGP_WSBEiJ_G0027308.1 mouse_genomes_project 4 14676591 14884519 + Mmp16 protein_coding retained_intron MGP_WSBEiJ_T0063689.1 MGP_WSBEiJ_G0027308.1 mouse_genomes_project 4 14881595 14929775 + Mmp16 protein_coding retained_intron MGP_WSBEiJ_T0065639.1 MGP_WSBEiJ_G0027759.1 mouse_genomes_project 4 107776461 107828000 + MGP_WSBEiJ_P0065639 Slc1a7 protein_coding protein_coding MGP_WSBEiJ_T0065640.1 MGP_WSBEiJ_G0027759.1 mouse_genomes_project 4 107824719 107827994 + Slc1a7 protein_coding retained_intron MGP_WSBEiJ_T0097056.1 MGP_WSBEiJ_G0035737.1 mouse_genomes_project 4 94418941 94419055 + n-R5s189 rRNA rRNA MGP_WSBEiJ_T0014310.1 MGP_WSBEiJ_G0012440.1 mouse_genomes_project 4 117468401 117468780 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068672.1 MGP_WSBEiJ_G0028429.1 mouse_genomes_project 4 158461901 158466620 - MGP_WSBEiJ_P0068672 Cptp protein_coding protein_coding MGP_WSBEiJ_T0068673.1 MGP_WSBEiJ_G0028429.1 mouse_genomes_project 4 158462476 158466542 - Cptp protein_coding processed_transcript MGP_WSBEiJ_T0068674.1 MGP_WSBEiJ_G0028429.1 mouse_genomes_project 4 158463543 158465998 - MGP_WSBEiJ_P0068674 Cptp protein_coding protein_coding MGP_WSBEiJ_T0100812.1 MGP_WSBEiJ_G0039270.1 mouse_genomes_project 4 72584096 72584792 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007696.1 MGP_WSBEiJ_G0006293.1 mouse_genomes_project 4 20100984 20242873 + Gm11884 lincRNA lincRNA MGP_WSBEiJ_T0066542.1 MGP_WSBEiJ_G0027964.1 mouse_genomes_project 4 125205928 125207179 - protein_coding retained_intron MGP_WSBEiJ_T0066543.1 MGP_WSBEiJ_G0027964.1 mouse_genomes_project 4 125206333 125207658 - MGP_WSBEiJ_P0066543 protein_coding protein_coding MGP_WSBEiJ_T0066544.1 MGP_WSBEiJ_G0027964.1 mouse_genomes_project 4 125206333 125207579 - MGP_WSBEiJ_P0066544 protein_coding protein_coding MGP_WSBEiJ_T0066545.1 MGP_WSBEiJ_G0027964.1 mouse_genomes_project 4 125206334 125207510 - MGP_WSBEiJ_P0066545 protein_coding protein_coding MGP_WSBEiJ_T0066546.1 MGP_WSBEiJ_G0027964.1 mouse_genomes_project 4 125206338 125208056 - MGP_WSBEiJ_P0066546 protein_coding protein_coding MGP_WSBEiJ_T0066547.1 MGP_WSBEiJ_G0027964.1 mouse_genomes_project 4 125206394 125207322 - MGP_WSBEiJ_P0066547 protein_coding protein_coding MGP_WSBEiJ_T0065293.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98392850 98593807 - MGP_WSBEiJ_P0065293 Dock7 protein_coding protein_coding MGP_WSBEiJ_T0065294.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98393033 98409621 - Dock7 protein_coding processed_transcript MGP_WSBEiJ_T0065295.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98393034 98593666 - MGP_WSBEiJ_P0065295 Dock7 protein_coding protein_coding MGP_WSBEiJ_T0065296.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98393036 98593666 - MGP_WSBEiJ_P0065296 Dock7 protein_coding protein_coding MGP_WSBEiJ_T0065297.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98393036 98486975 - MGP_WSBEiJ_P0065297 Dock7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065298.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98393437 98593666 - MGP_WSBEiJ_P0065298 Dock7 protein_coding protein_coding MGP_WSBEiJ_T0065299.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98401433 98402386 - Dock7 protein_coding retained_intron MGP_WSBEiJ_T0065300.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98401436 98405567 - Dock7 protein_coding retained_intron MGP_WSBEiJ_T0065301.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98401838 98412024 - Dock7 protein_coding processed_transcript MGP_WSBEiJ_T0065302.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98402743 98415305 - MGP_WSBEiJ_P0065302 Dock7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065303.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98412389 98420407 - Dock7 protein_coding retained_intron MGP_WSBEiJ_T0065304.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98416174 98417340 - Dock7 protein_coding processed_transcript MGP_WSBEiJ_T0065305.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98450750 98471021 - MGP_WSBEiJ_P0065305 Dock7 protein_coding protein_coding MGP_WSBEiJ_T0065306.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98452834 98470986 - MGP_WSBEiJ_P0065306 Dock7 protein_coding protein_coding MGP_WSBEiJ_T0065307.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98454065 98456371 - Dock7 protein_coding retained_intron MGP_WSBEiJ_T0065308.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98462422 98470202 - Dock7 protein_coding processed_transcript MGP_WSBEiJ_T0065309.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98469662 98519961 - MGP_WSBEiJ_P0065309 Dock7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065313.1 MGP_WSBEiJ_G0027689.1 mouse_genomes_project 4 98528368 98531705 - Dock7 protein_coding retained_intron MGP_WSBEiJ_T0004377.1 MGP_WSBEiJ_G0003812.1 mouse_genomes_project 4 45105722 45117870 - Gm12426 antisense antisense MGP_WSBEiJ_T0063980.1 MGP_WSBEiJ_G0027382.1 mouse_genomes_project 4 38439668 38495928 + MGP_WSBEiJ_P0063980 Nfx1 protein_coding protein_coding MGP_WSBEiJ_T0063981.1 MGP_WSBEiJ_G0027382.1 mouse_genomes_project 4 38439668 38481264 + MGP_WSBEiJ_P0063981 Nfx1 protein_coding protein_coding MGP_WSBEiJ_T0063982.1 MGP_WSBEiJ_G0027382.1 mouse_genomes_project 4 38439668 38482526 + MGP_WSBEiJ_P0063982 Nfx1 protein_coding protein_coding MGP_WSBEiJ_T0063983.1 MGP_WSBEiJ_G0027382.1 mouse_genomes_project 4 38471113 38480825 + Nfx1 protein_coding processed_transcript MGP_WSBEiJ_T0063984.1 MGP_WSBEiJ_G0027382.1 mouse_genomes_project 4 38477857 38490963 + Nfx1 protein_coding processed_transcript MGP_WSBEiJ_T0063985.1 MGP_WSBEiJ_G0027382.1 mouse_genomes_project 4 38490008 38495113 + Nfx1 protein_coding processed_transcript MGP_WSBEiJ_T0063986.1 MGP_WSBEiJ_G0027382.1 mouse_genomes_project 4 38493138 38494475 + Nfx1 protein_coding processed_transcript MGP_WSBEiJ_T0066108.1 MGP_WSBEiJ_G0027855.1 mouse_genomes_project 4 117058875 117064805 - MGP_WSBEiJ_P0066108 Rps8 protein_coding protein_coding MGP_WSBEiJ_T0066109.1 MGP_WSBEiJ_G0027855.1 mouse_genomes_project 4 117058882 117062947 - Rps8 protein_coding retained_intron MGP_WSBEiJ_T0066110.1 MGP_WSBEiJ_G0027855.1 mouse_genomes_project 4 117059439 117063745 - Rps8 protein_coding retained_intron MGP_WSBEiJ_T0066111.1 MGP_WSBEiJ_G0027855.1 mouse_genomes_project 4 117059458 117064646 - Rps8 protein_coding retained_intron MGP_WSBEiJ_T0066112.1 MGP_WSBEiJ_G0027855.1 mouse_genomes_project 4 117062959 117064631 - Rps8 protein_coding retained_intron MGP_WSBEiJ_T0066113.1 MGP_WSBEiJ_G0027855.1 mouse_genomes_project 4 117063135 117064634 - Rps8 protein_coding retained_intron MGP_WSBEiJ_T0067936.1 MGP_WSBEiJ_G0028275.1 mouse_genomes_project 4 145074039 145097524 + MGP_WSBEiJ_P0067936 Lrrc38 protein_coding protein_coding MGP_WSBEiJ_T0004418.1 MGP_WSBEiJ_G0003843.1 mouse_genomes_project 4 107606493 107611409 - Lrp8os2 antisense antisense MGP_WSBEiJ_T0004419.1 MGP_WSBEiJ_G0003843.1 mouse_genomes_project 4 107606493 107624557 - Lrp8os2 antisense antisense MGP_WSBEiJ_T0004420.1 MGP_WSBEiJ_G0003843.1 mouse_genomes_project 4 107608448 107624509 - Lrp8os2 antisense antisense MGP_WSBEiJ_T0004421.1 MGP_WSBEiJ_G0003843.1 mouse_genomes_project 4 107611268 107624545 - Lrp8os2 antisense antisense MGP_WSBEiJ_T0064288.1 MGP_WSBEiJ_G0027439.1 mouse_genomes_project 4 41334099 41350970 + protein_coding processed_transcript MGP_WSBEiJ_T0064289.1 MGP_WSBEiJ_G0027439.1 mouse_genomes_project 4 41334163 41359100 + MGP_WSBEiJ_P0064289 protein_coding protein_coding MGP_WSBEiJ_T0064290.1 MGP_WSBEiJ_G0027439.1 mouse_genomes_project 4 41334397 41350173 + MGP_WSBEiJ_P0064290 protein_coding protein_coding MGP_WSBEiJ_T0064291.1 MGP_WSBEiJ_G0027439.1 mouse_genomes_project 4 41334458 41345853 + protein_coding processed_transcript MGP_WSBEiJ_T0064292.1 MGP_WSBEiJ_G0027439.1 mouse_genomes_project 4 41339000 41350762 + protein_coding processed_transcript MGP_WSBEiJ_T0064293.1 MGP_WSBEiJ_G0027439.1 mouse_genomes_project 4 41354247 41355054 + protein_coding processed_transcript MGP_WSBEiJ_T0066587.1 MGP_WSBEiJ_G0027978.1 mouse_genomes_project 4 126497079 126532761 + MGP_WSBEiJ_P0066587 Oscp1 protein_coding protein_coding MGP_WSBEiJ_T0066588.1 MGP_WSBEiJ_G0027978.1 mouse_genomes_project 4 126497195 126532769 + MGP_WSBEiJ_P0066588 Oscp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0066589.1 MGP_WSBEiJ_G0027978.1 mouse_genomes_project 4 126504145 126528992 + Oscp1 protein_coding processed_transcript MGP_WSBEiJ_T0066590.1 MGP_WSBEiJ_G0027978.1 mouse_genomes_project 4 126523485 126524981 + Oscp1 protein_coding processed_transcript MGP_WSBEiJ_T0066591.1 MGP_WSBEiJ_G0027978.1 mouse_genomes_project 4 126528229 126529210 + Oscp1 protein_coding processed_transcript MGP_WSBEiJ_T0007786.1 MGP_WSBEiJ_G0006372.1 mouse_genomes_project 4 100893277 100942282 + 0610043K17Rik lincRNA lincRNA MGP_WSBEiJ_T0007788.1 MGP_WSBEiJ_G0006372.1 mouse_genomes_project 4 100909053 100933976 + 0610043K17Rik lincRNA lincRNA MGP_WSBEiJ_T0064523.1 MGP_WSBEiJ_G0027489.1 mouse_genomes_project 4 46139439 46227185 - MGP_WSBEiJ_P0064523 Erp44 protein_coding protein_coding MGP_WSBEiJ_T0064524.1 MGP_WSBEiJ_G0027489.1 mouse_genomes_project 4 46140606 46143141 - Erp44 protein_coding processed_transcript MGP_WSBEiJ_T0064525.1 MGP_WSBEiJ_G0027489.1 mouse_genomes_project 4 46184286 46190810 - Erp44 protein_coding processed_transcript MGP_WSBEiJ_T0064526.1 MGP_WSBEiJ_G0027489.1 mouse_genomes_project 4 46186929 46227079 - Erp44 protein_coding processed_transcript MGP_WSBEiJ_T0065339.1 MGP_WSBEiJ_G0027699.1 mouse_genomes_project 4 99997995 100073636 + MGP_WSBEiJ_P0065339 Ube2u protein_coding protein_coding MGP_WSBEiJ_T0004345.1 MGP_WSBEiJ_G0003787.1 mouse_genomes_project 4 8194231 8195609 - Gm11831 antisense antisense MGP_WSBEiJ_T0068477.1 MGP_WSBEiJ_G0028392.1 mouse_genomes_project 4 156833216 156847011 + MGP_WSBEiJ_P0068477 B230104I21Rik protein_coding protein_coding MGP_WSBEiJ_T0014368.1 MGP_WSBEiJ_G0012498.1 mouse_genomes_project 4 136444680 136445148 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014091.1 MGP_WSBEiJ_G0012221.1 mouse_genomes_project 4 32199333 32200361 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068128.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151287329 151427760 - MGP_WSBEiJ_P0068128 Kif1b protein_coding protein_coding MGP_WSBEiJ_T0068129.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151289029 151297200 - Kif1b protein_coding retained_intron MGP_WSBEiJ_T0068130.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151289868 151311289 - MGP_WSBEiJ_P0068130 Kif1b protein_coding protein_coding MGP_WSBEiJ_T0068131.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151291245 151427574 - MGP_WSBEiJ_P0068131 Kif1b protein_coding protein_coding MGP_WSBEiJ_T0068132.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151318939 151323559 - Kif1b protein_coding retained_intron MGP_WSBEiJ_T0068133.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151319338 151327251 - Kif1b protein_coding retained_intron MGP_WSBEiJ_T0068134.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151328431 151336940 - Kif1b protein_coding retained_intron MGP_WSBEiJ_T0068135.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151347024 151427691 - MGP_WSBEiJ_P0068135 Kif1b protein_coding protein_coding MGP_WSBEiJ_T0068136.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151358594 151361218 - Kif1b protein_coding retained_intron MGP_WSBEiJ_T0068137.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151380308 151427761 - Kif1b protein_coding retained_intron MGP_WSBEiJ_T0068138.1 MGP_WSBEiJ_G0028332.1 mouse_genomes_project 4 151407119 151427732 - Kif1b protein_coding retained_intron MGP_WSBEiJ_T0007810.1 MGP_WSBEiJ_G0006388.1 mouse_genomes_project 4 116018346 116019831 + Gm12951 lincRNA lincRNA MGP_WSBEiJ_T0063849.1 MGP_WSBEiJ_G0027348.1 mouse_genomes_project 4 30324365 30354750 + MGP_WSBEiJ_P0063849 Gabrr1 protein_coding protein_coding MGP_WSBEiJ_T0011370.1 MGP_WSBEiJ_G0009527.1 mouse_genomes_project 4 69128102 69128408 - Gm26320 misc_RNA misc_RNA MGP_WSBEiJ_T0004413.1 MGP_WSBEiJ_G0003838.1 mouse_genomes_project 4 106291725 106294976 - 2700068H02Rik antisense antisense MGP_WSBEiJ_T0064124.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40673329 40677345 - MGP_WSBEiJ_P0064124 Stoml2 protein_coding protein_coding MGP_WSBEiJ_T0064125.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40673665 40675473 - Stoml2 protein_coding processed_transcript MGP_WSBEiJ_T0064126.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40673681 40675550 - Stoml2 protein_coding processed_transcript MGP_WSBEiJ_T0064127.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40673868 40677091 - MGP_WSBEiJ_P0064127 Stoml2 protein_coding protein_coding MGP_WSBEiJ_T0064128.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40673880 40676229 - MGP_WSBEiJ_P0064128 Stoml2 protein_coding protein_coding MGP_WSBEiJ_T0064129.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40675199 40677085 - Stoml2 protein_coding processed_transcript MGP_WSBEiJ_T0064130.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40675232 40677005 - MGP_WSBEiJ_P0064130 Stoml2 protein_coding protein_coding MGP_WSBEiJ_T0064131.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40675250 40676135 - Stoml2 protein_coding processed_transcript MGP_WSBEiJ_T0064132.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40675408 40676236 - Stoml2 protein_coding processed_transcript MGP_WSBEiJ_T0064133.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40675676 40676993 - Stoml2 protein_coding processed_transcript MGP_WSBEiJ_T0064134.1 MGP_WSBEiJ_G0027417.1 mouse_genomes_project 4 40676128 40677071 - Stoml2 protein_coding processed_transcript MGP_WSBEiJ_T0014306.1 MGP_WSBEiJ_G0012436.1 mouse_genomes_project 4 116740477 116740924 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007711.1 MGP_WSBEiJ_G0006308.1 mouse_genomes_project 4 40676634 40678116 + Gm26643 lincRNA lincRNA MGP_WSBEiJ_T0014281.1 MGP_WSBEiJ_G0012411.1 mouse_genomes_project 4 107109929 107110945 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004341.1 MGP_WSBEiJ_G0003784.1 mouse_genomes_project 4 3303493 3319441 + Gm11802 antisense antisense MGP_WSBEiJ_T0007755.1 MGP_WSBEiJ_G0006345.1 mouse_genomes_project 4 80931320 80933217 - Gm12914 lincRNA lincRNA MGP_WSBEiJ_T0017474.1 MGP_WSBEiJ_G0014979.1 mouse_genomes_project 4 94376901 94403059 - Gm12703 processed_transcript processed_transcript MGP_WSBEiJ_T0013998.1 MGP_WSBEiJ_G0012128.1 mouse_genomes_project 4 3128246 3128690 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065139.1 MGP_WSBEiJ_G0027643.1 mouse_genomes_project 4 87933727 87935484 - MGP_WSBEiJ_P0065139 protein_coding protein_coding MGP_WSBEiJ_T0099565.1 MGP_WSBEiJ_G0038228.1 mouse_genomes_project 4 131402474 131402557 + Gm23711 snoRNA snoRNA MGP_WSBEiJ_T0065846.1 MGP_WSBEiJ_G0027795.1 mouse_genomes_project 4 111883260 111957331 + Skint8 protein_coding processed_transcript MGP_WSBEiJ_T0065847.1 MGP_WSBEiJ_G0027795.1 mouse_genomes_project 4 111883525 111927947 + MGP_WSBEiJ_P0065847 Skint8 protein_coding protein_coding MGP_WSBEiJ_T0065848.1 MGP_WSBEiJ_G0027795.1 mouse_genomes_project 4 111904690 111918028 + MGP_WSBEiJ_P0065848 Skint8 protein_coding protein_coding MGP_WSBEiJ_T0065849.1 MGP_WSBEiJ_G0027795.1 mouse_genomes_project 4 111904785 111916248 + Skint8 protein_coding retained_intron MGP_WSBEiJ_T0001393.1 MGP_WSBEiJ_G0001321.1 mouse_genomes_project 4 152233429 152237275 + TEC TEC MGP_WSBEiJ_T0100817.1 MGP_WSBEiJ_G0039275.1 mouse_genomes_project 4 87940323 87940831 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100093.1 MGP_WSBEiJ_G0038700.1 mouse_genomes_project 4 150080666 150081267 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100094.1 MGP_WSBEiJ_G0038700.1 mouse_genomes_project 4 150080769 150081177 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0007688.1 MGP_WSBEiJ_G0006286.1 mouse_genomes_project 4 10679536 10753058 - Gm11823 lincRNA lincRNA MGP_WSBEiJ_T0066436.1 MGP_WSBEiJ_G0027934.1 mouse_genomes_project 4 121584486 121587284 - MGP_WSBEiJ_P0066436 protein_coding protein_coding MGP_WSBEiJ_T0065794.1 MGP_WSBEiJ_G0027788.1 mouse_genomes_project 4 109876840 109882476 + MGP_WSBEiJ_P0065794 Dmrta2 protein_coding protein_coding MGP_WSBEiJ_T0014124.1 MGP_WSBEiJ_G0012254.1 mouse_genomes_project 4 46957113 46957451 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007876.1 MGP_WSBEiJ_G0006434.1 mouse_genomes_project 4 139502724 139503200 + 2310026L22Rik lincRNA lincRNA MGP_WSBEiJ_T0064236.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41186858 41216228 - MGP_WSBEiJ_P0064236 Tln1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064237.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41186869 41218834 - MGP_WSBEiJ_P0064237 Tln1 protein_coding protein_coding MGP_WSBEiJ_T0064238.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41201897 41204135 - MGP_WSBEiJ_P0064238 Tln1 protein_coding protein_coding MGP_WSBEiJ_T0064239.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41203309 41207759 - MGP_WSBEiJ_P0064239 Tln1 protein_coding protein_coding MGP_WSBEiJ_T0064240.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41209954 41210955 - Tln1 protein_coding processed_transcript MGP_WSBEiJ_T0064241.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41211017 41218569 - Tln1 protein_coding processed_transcript MGP_WSBEiJ_T0064242.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41211609 41214964 - MGP_WSBEiJ_P0064242 Tln1 protein_coding protein_coding MGP_WSBEiJ_T0064243.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41212067 41212450 - Tln1 protein_coding processed_transcript MGP_WSBEiJ_T0064244.1 MGP_WSBEiJ_G0027430.1 mouse_genomes_project 4 41215846 41219103 - Tln1 protein_coding processed_transcript MGP_WSBEiJ_T0004424.1 MGP_WSBEiJ_G0003845.1 mouse_genomes_project 4 108805361 108830405 - 8030443G20Rik antisense antisense MGP_WSBEiJ_T0001381.1 MGP_WSBEiJ_G0001310.1 mouse_genomes_project 4 108478096 108480384 - TEC TEC MGP_WSBEiJ_T0014131.1 MGP_WSBEiJ_G0012261.1 mouse_genomes_project 4 49995902 49997145 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067204.1 MGP_WSBEiJ_G0028105.1 mouse_genomes_project 4 134393579 134405236 + MGP_WSBEiJ_P0067204 Kdf1 protein_coding protein_coding MGP_WSBEiJ_T0067205.1 MGP_WSBEiJ_G0028105.1 mouse_genomes_project 4 134393608 134407166 + MGP_WSBEiJ_P0067205 Kdf1 protein_coding protein_coding MGP_WSBEiJ_T0067206.1 MGP_WSBEiJ_G0028105.1 mouse_genomes_project 4 134393639 134404959 + MGP_WSBEiJ_P0067206 Kdf1 protein_coding protein_coding MGP_WSBEiJ_T0067207.1 MGP_WSBEiJ_G0028105.1 mouse_genomes_project 4 134393671 134407161 + MGP_WSBEiJ_P0067207 Kdf1 protein_coding protein_coding MGP_WSBEiJ_T0067208.1 MGP_WSBEiJ_G0028105.1 mouse_genomes_project 4 134393699 134407163 + MGP_WSBEiJ_P0067208 Kdf1 protein_coding protein_coding MGP_WSBEiJ_T0064811.1 MGP_WSBEiJ_G0027572.1 mouse_genomes_project 4 61008857 61011206 - MGP_WSBEiJ_P0064811 Pole3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064812.1 MGP_WSBEiJ_G0027572.1 mouse_genomes_project 4 61010544 61011248 - Pole3 protein_coding retained_intron MGP_WSBEiJ_T0004447.1 MGP_WSBEiJ_G0003865.1 mouse_genomes_project 4 123954073 123956925 + Gm12925 antisense antisense MGP_WSBEiJ_T0004448.1 MGP_WSBEiJ_G0003865.1 mouse_genomes_project 4 123955648 123959405 + Gm12925 antisense antisense MGP_WSBEiJ_T0004449.1 MGP_WSBEiJ_G0003865.1 mouse_genomes_project 4 123955810 123959412 + Gm12925 antisense antisense MGP_WSBEiJ_T0064478.1 MGP_WSBEiJ_G0027478.1 mouse_genomes_project 4 44401301 44438191 - MGP_WSBEiJ_P0064478 Coro2a protein_coding protein_coding MGP_WSBEiJ_T0064479.1 MGP_WSBEiJ_G0027478.1 mouse_genomes_project 4 44401307 44438209 - MGP_WSBEiJ_P0064479 Coro2a protein_coding protein_coding MGP_WSBEiJ_T0064480.1 MGP_WSBEiJ_G0027478.1 mouse_genomes_project 4 44401307 44465263 - MGP_WSBEiJ_P0064480 Coro2a protein_coding protein_coding MGP_WSBEiJ_T0064481.1 MGP_WSBEiJ_G0027478.1 mouse_genomes_project 4 44404894 44408269 - Coro2a protein_coding processed_transcript MGP_WSBEiJ_T0064482.1 MGP_WSBEiJ_G0027478.1 mouse_genomes_project 4 44405658 44408405 - Coro2a protein_coding retained_intron MGP_WSBEiJ_T0064483.1 MGP_WSBEiJ_G0027478.1 mouse_genomes_project 4 44408603 44463291 - Coro2a protein_coding retained_intron MGP_WSBEiJ_T0065143.1 MGP_WSBEiJ_G0027647.1 mouse_genomes_project 4 88079896 88089281 + MGP_WSBEiJ_P0065143 protein_coding protein_coding MGP_WSBEiJ_T0004470.1 MGP_WSBEiJ_G0003882.1 mouse_genomes_project 4 134348483 134352908 - Gm13257 antisense antisense MGP_WSBEiJ_T0067141.1 MGP_WSBEiJ_G0028089.1 mouse_genomes_project 4 133584883 133599498 - MGP_WSBEiJ_P0067141 Themis2 protein_coding protein_coding MGP_WSBEiJ_T0068202.1 MGP_WSBEiJ_G0028344.1 mouse_genomes_project 4 152253809 152273587 + MGP_WSBEiJ_P0068202 Gpr157 protein_coding protein_coding MGP_WSBEiJ_T0068317.1 MGP_WSBEiJ_G0028367.1 mouse_genomes_project 4 154441633 154445840 + MGP_WSBEiJ_P0068317 Tnfrsf25 protein_coding protein_coding MGP_WSBEiJ_T0068318.1 MGP_WSBEiJ_G0028367.1 mouse_genomes_project 4 154442041 154445832 + MGP_WSBEiJ_P0068318 Tnfrsf25 protein_coding protein_coding MGP_WSBEiJ_T0068319.1 MGP_WSBEiJ_G0028367.1 mouse_genomes_project 4 154442097 154442686 + Tnfrsf25 protein_coding processed_transcript MGP_WSBEiJ_T0068320.1 MGP_WSBEiJ_G0028367.1 mouse_genomes_project 4 154443673 154445044 + Tnfrsf25 protein_coding processed_transcript MGP_WSBEiJ_T0065909.1 MGP_WSBEiJ_G0027816.1 mouse_genomes_project 4 115595886 115597071 - MGP_WSBEiJ_P0065909 Tex38 protein_coding protein_coding MGP_WSBEiJ_T0067041.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641357 132655803 - MGP_WSBEiJ_P0067041 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067042.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132655840 - Epb41 protein_coding processed_transcript MGP_WSBEiJ_T0067043.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132805675 - Epb41 protein_coding processed_transcript MGP_WSBEiJ_T0067044.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132728350 - MGP_WSBEiJ_P0067044 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067045.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132687517 - MGP_WSBEiJ_P0067045 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067046.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132687548 - MGP_WSBEiJ_P0067046 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067047.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132724738 - MGP_WSBEiJ_P0067047 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067048.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132805646 - MGP_WSBEiJ_P0067048 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067049.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132805646 - MGP_WSBEiJ_P0067049 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067050.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641360 132728351 - MGP_WSBEiJ_P0067050 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067051.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641375 132774845 - MGP_WSBEiJ_P0067051 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067052.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641375 132802519 - MGP_WSBEiJ_P0067052 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067053.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132641375 132774845 - MGP_WSBEiJ_P0067053 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067054.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132642075 132802519 - Epb41 protein_coding processed_transcript MGP_WSBEiJ_T0067055.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132644459 132728344 - MGP_WSBEiJ_P0067055 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067056.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132673955 132731552 - MGP_WSBEiJ_P0067056 Epb41 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067057.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132676059 132774858 - MGP_WSBEiJ_P0067057 Epb41 protein_coding protein_coding MGP_WSBEiJ_T0067058.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132709483 132721251 - Epb41 protein_coding processed_transcript MGP_WSBEiJ_T0067059.1 MGP_WSBEiJ_G0028070.1 mouse_genomes_project 4 132724719 132805618 - Epb41 protein_coding processed_transcript MGP_WSBEiJ_T0010452.1 MGP_WSBEiJ_G0008609.1 mouse_genomes_project 4 127059378 127059437 + Mir7119 miRNA miRNA MGP_WSBEiJ_T0014255.1 MGP_WSBEiJ_G0012385.1 mouse_genomes_project 4 98574192 98574911 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100831.1 MGP_WSBEiJ_G0039289.1 mouse_genomes_project 4 114867570 114868616 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0066662.1 MGP_WSBEiJ_G0027993.1 mouse_genomes_project 4 127114097 127120092 + MGP_WSBEiJ_P0066662 5730409E04Rik protein_coding protein_coding MGP_WSBEiJ_T0066663.1 MGP_WSBEiJ_G0027993.1 mouse_genomes_project 4 127114133 127120092 + MGP_WSBEiJ_P0066663 5730409E04Rik protein_coding protein_coding MGP_WSBEiJ_T0067551.1 MGP_WSBEiJ_G0028181.1 mouse_genomes_project 4 138031721 138034992 - MGP_WSBEiJ_P0067551 C1qc protein_coding protein_coding MGP_WSBEiJ_T0067552.1 MGP_WSBEiJ_G0028181.1 mouse_genomes_project 4 138033578 138034803 - C1qc protein_coding processed_transcript MGP_WSBEiJ_T0007811.1 MGP_WSBEiJ_G0006389.1 mouse_genomes_project 4 117450279 117454441 + Gm12827 lincRNA lincRNA MGP_WSBEiJ_T0068640.1 MGP_WSBEiJ_G0028423.1 mouse_genomes_project 4 158395627 158396436 + Mrpl20 protein_coding processed_transcript MGP_WSBEiJ_T0068641.1 MGP_WSBEiJ_G0028423.1 mouse_genomes_project 4 158395735 158401684 + MGP_WSBEiJ_P0068641 Mrpl20 protein_coding unknown_likely_coding MGP_WSBEiJ_T0068642.1 MGP_WSBEiJ_G0028423.1 mouse_genomes_project 4 158396440 158401831 + MGP_WSBEiJ_P0068642 Mrpl20 protein_coding protein_coding MGP_WSBEiJ_T0068643.1 MGP_WSBEiJ_G0028423.1 mouse_genomes_project 4 158396445 158400191 + MGP_WSBEiJ_P0068643 Mrpl20 protein_coding protein_coding MGP_WSBEiJ_T0068644.1 MGP_WSBEiJ_G0028423.1 mouse_genomes_project 4 158396552 158401827 + Mrpl20 protein_coding processed_transcript MGP_WSBEiJ_T0064438.1 MGP_WSBEiJ_G0027468.1 mouse_genomes_project 4 43862194 43944907 + MGP_WSBEiJ_P0064438 Tmod1 protein_coding protein_coding MGP_WSBEiJ_T0064439.1 MGP_WSBEiJ_G0027468.1 mouse_genomes_project 4 43862468 43918229 + MGP_WSBEiJ_P0064439 Tmod1 protein_coding protein_coding MGP_WSBEiJ_T0064440.1 MGP_WSBEiJ_G0027468.1 mouse_genomes_project 4 43904672 43927046 + Tmod1 protein_coding processed_transcript MGP_WSBEiJ_T0064441.1 MGP_WSBEiJ_G0027468.1 mouse_genomes_project 4 43910228 43918213 + Tmod1 protein_coding processed_transcript MGP_WSBEiJ_T0064442.1 MGP_WSBEiJ_G0027468.1 mouse_genomes_project 4 43927580 43943310 + Tmod1 protein_coding processed_transcript MGP_WSBEiJ_T0014390.1 MGP_WSBEiJ_G0012520.1 mouse_genomes_project 4 146300797 146301346 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063915.1 MGP_WSBEiJ_G0027366.1 mouse_genomes_project 4 32433921 32435793 + MGP_WSBEiJ_P0063915 Ifnk protein_coding protein_coding MGP_WSBEiJ_T0097058.1 MGP_WSBEiJ_G0035739.1 mouse_genomes_project 4 125176658 125176777 + n-R5s192 rRNA rRNA MGP_WSBEiJ_T0065680.1 MGP_WSBEiJ_G0027766.1 mouse_genomes_project 4 108205617 108226488 - MGP_WSBEiJ_P0065680 Fam159a protein_coding protein_coding MGP_WSBEiJ_T0063784.1 MGP_WSBEiJ_G0027335.1 mouse_genomes_project 4 22481430 22681762 - MGP_WSBEiJ_P0063784 Fut9 protein_coding protein_coding MGP_WSBEiJ_T0063785.1 MGP_WSBEiJ_G0027335.1 mouse_genomes_project 4 22491322 22681860 - MGP_WSBEiJ_P0063785 Fut9 protein_coding protein_coding MGP_WSBEiJ_T0063786.1 MGP_WSBEiJ_G0027335.1 mouse_genomes_project 4 22679309 22681471 - Fut9 protein_coding processed_transcript MGP_WSBEiJ_T0100843.1 MGP_WSBEiJ_G0039301.1 mouse_genomes_project 4 140736668 140737931 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0064658.1 MGP_WSBEiJ_G0027530.1 mouse_genomes_project 4 55117423 55202974 - MGP_WSBEiJ_P0064658 Tmem245 protein_coding protein_coding MGP_WSBEiJ_T0064659.1 MGP_WSBEiJ_G0027530.1 mouse_genomes_project 4 55131289 55192345 - Tmem245 protein_coding processed_transcript MGP_WSBEiJ_T0064660.1 MGP_WSBEiJ_G0027530.1 mouse_genomes_project 4 55131289 55175747 - MGP_WSBEiJ_P0064660 Tmem245 protein_coding protein_coding MGP_WSBEiJ_T0064661.1 MGP_WSBEiJ_G0027530.1 mouse_genomes_project 4 55131660 55202948 - MGP_WSBEiJ_P0064661 Tmem245 protein_coding protein_coding MGP_WSBEiJ_T0064662.1 MGP_WSBEiJ_G0027530.1 mouse_genomes_project 4 55137029 55202961 - Tmem245 protein_coding processed_transcript MGP_WSBEiJ_T0007722.1 MGP_WSBEiJ_G0006318.1 mouse_genomes_project 4 50068356 50155554 - C630028M04Rik lincRNA lincRNA MGP_WSBEiJ_T0066458.1 MGP_WSBEiJ_G0027940.1 mouse_genomes_project 4 123247392 123289577 + Trit1 protein_coding processed_transcript MGP_WSBEiJ_T0066459.1 MGP_WSBEiJ_G0027940.1 mouse_genomes_project 4 123247392 123289577 + MGP_WSBEiJ_P0066459 Trit1 protein_coding protein_coding MGP_WSBEiJ_T0066460.1 MGP_WSBEiJ_G0027940.1 mouse_genomes_project 4 123283383 123288831 + Trit1 protein_coding processed_transcript MGP_WSBEiJ_T0007898.1 MGP_WSBEiJ_G0006455.1 mouse_genomes_project 4 152282553 152287939 - Gm13093 lincRNA lincRNA MGP_WSBEiJ_T0011375.1 MGP_WSBEiJ_G0009532.1 mouse_genomes_project 4 97685305 97685419 + Gm24203 misc_RNA misc_RNA MGP_WSBEiJ_T0063830.1 MGP_WSBEiJ_G0027343.1 mouse_genomes_project 4 29965071 29966219 + MGP_WSBEiJ_P0063830 Lyrm2 protein_coding protein_coding MGP_WSBEiJ_T0063831.1 MGP_WSBEiJ_G0027343.1 mouse_genomes_project 4 29965097 29966395 + Lyrm2 protein_coding retained_intron MGP_WSBEiJ_T0063832.1 MGP_WSBEiJ_G0027343.1 mouse_genomes_project 4 29965100 29965812 + Lyrm2 protein_coding retained_intron MGP_WSBEiJ_T0099509.1 MGP_WSBEiJ_G0038172.1 mouse_genomes_project 4 37906113 37906208 - Gm23338 snoRNA snoRNA MGP_WSBEiJ_T0017445.1 MGP_WSBEiJ_G0014959.1 mouse_genomes_project 4 21829119 22132792 + processed_transcript processed_transcript MGP_WSBEiJ_T0014204.1 MGP_WSBEiJ_G0012334.1 mouse_genomes_project 4 77605811 77607088 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066505.1 MGP_WSBEiJ_G0027952.1 mouse_genomes_project 4 124084054 124115897 + Rhbdl2 protein_coding processed_transcript MGP_WSBEiJ_T0066506.1 MGP_WSBEiJ_G0027952.1 mouse_genomes_project 4 124084055 124136944 + MGP_WSBEiJ_P0066506 Rhbdl2 protein_coding protein_coding MGP_WSBEiJ_T0066507.1 MGP_WSBEiJ_G0027952.1 mouse_genomes_project 4 124094379 124114540 + Rhbdl2 protein_coding processed_transcript MGP_WSBEiJ_T0066508.1 MGP_WSBEiJ_G0027952.1 mouse_genomes_project 4 124114312 124136944 + MGP_WSBEiJ_P0066508 Rhbdl2 protein_coding protein_coding MGP_WSBEiJ_T0066509.1 MGP_WSBEiJ_G0027952.1 mouse_genomes_project 4 124117733 124120706 + Rhbdl2 protein_coding processed_transcript MGP_WSBEiJ_T0014145.1 MGP_WSBEiJ_G0012275.1 mouse_genomes_project 4 53280457 53280818 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014121.1 MGP_WSBEiJ_G0012251.1 mouse_genomes_project 4 45077398 45077533 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063806.1 MGP_WSBEiJ_G0027339.1 mouse_genomes_project 4 29383380 29743388 + MGP_WSBEiJ_P0063806 Bach2 protein_coding protein_coding MGP_WSBEiJ_T0063807.1 MGP_WSBEiJ_G0027339.1 mouse_genomes_project 4 29383526 29740152 + MGP_WSBEiJ_P0063807 Bach2 protein_coding protein_coding MGP_WSBEiJ_T0063808.1 MGP_WSBEiJ_G0027339.1 mouse_genomes_project 4 29383653 29655111 + Bach2 protein_coding processed_transcript MGP_WSBEiJ_T0063809.1 MGP_WSBEiJ_G0027339.1 mouse_genomes_project 4 29393797 29466365 + Bach2 protein_coding processed_transcript MGP_WSBEiJ_T0063810.1 MGP_WSBEiJ_G0027339.1 mouse_genomes_project 4 29569488 29743376 + MGP_WSBEiJ_P0063810 Bach2 protein_coding protein_coding MGP_WSBEiJ_T0063811.1 MGP_WSBEiJ_G0027339.1 mouse_genomes_project 4 29654979 29656101 + Bach2 protein_coding processed_transcript MGP_WSBEiJ_T0063812.1 MGP_WSBEiJ_G0027339.1 mouse_genomes_project 4 29732700 29738791 + Bach2 protein_coding processed_transcript MGP_WSBEiJ_T0014078.1 MGP_WSBEiJ_G0012208.1 mouse_genomes_project 4 29290698 29291135 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007855.1 MGP_WSBEiJ_G0006418.1 mouse_genomes_project 4 132175088 132194889 + Gm831 lincRNA lincRNA MGP_WSBEiJ_T0007832.1 MGP_WSBEiJ_G0006402.1 mouse_genomes_project 4 128026780 128028793 + 4930471C06Rik lincRNA lincRNA MGP_WSBEiJ_T0007833.1 MGP_WSBEiJ_G0006402.1 mouse_genomes_project 4 128026866 128028793 + 4930471C06Rik lincRNA lincRNA MGP_WSBEiJ_T0010466.1 MGP_WSBEiJ_G0008623.1 mouse_genomes_project 4 136459062 136459141 - Mir700 miRNA miRNA MGP_WSBEiJ_T0065545.1 MGP_WSBEiJ_G0027744.1 mouse_genomes_project 4 106867813 106879847 + MGP_WSBEiJ_P0065545 Cdcp2 protein_coding protein_coding MGP_WSBEiJ_T0014407.1 MGP_WSBEiJ_G0012537.1 mouse_genomes_project 4 156704628 156705101 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014342.1 MGP_WSBEiJ_G0012472.1 mouse_genomes_project 4 125070403 125071722 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100829.1 MGP_WSBEiJ_G0039287.1 mouse_genomes_project 4 113728440 113729450 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0066274.1 MGP_WSBEiJ_G0027894.1 mouse_genomes_project 4 118942545 118944100 - MGP_WSBEiJ_P0066274 Olfr1329 protein_coding protein_coding MGP_WSBEiJ_T0014155.1 MGP_WSBEiJ_G0012285.1 mouse_genomes_project 4 55742281 55744270 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014408.1 MGP_WSBEiJ_G0012538.1 mouse_genomes_project 4 158077234 158077625 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068671.1 MGP_WSBEiJ_G0028428.1 mouse_genomes_project 4 158456473 158460554 - MGP_WSBEiJ_P0068671 Tas1r3 protein_coding protein_coding MGP_WSBEiJ_T0066821.1 MGP_WSBEiJ_G0028029.1 mouse_genomes_project 4 130001009 130023397 + MGP_WSBEiJ_P0066821 Zbtb8os protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066822.1 MGP_WSBEiJ_G0028029.1 mouse_genomes_project 4 130001009 130018721 + MGP_WSBEiJ_P0066822 Zbtb8os protein_coding protein_coding MGP_WSBEiJ_T0066823.1 MGP_WSBEiJ_G0028029.1 mouse_genomes_project 4 130001326 130014774 + MGP_WSBEiJ_P0066823 Zbtb8os protein_coding protein_coding MGP_WSBEiJ_T0066824.1 MGP_WSBEiJ_G0028029.1 mouse_genomes_project 4 130001361 130015885 + MGP_WSBEiJ_P0066824 Zbtb8os protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066825.1 MGP_WSBEiJ_G0028029.1 mouse_genomes_project 4 130010673 130015782 + Zbtb8os protein_coding retained_intron MGP_WSBEiJ_T0068540.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157796988 157803595 + Faap20 protein_coding processed_transcript MGP_WSBEiJ_T0068541.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797047 157798126 + Faap20 protein_coding processed_transcript MGP_WSBEiJ_T0068542.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797063 157797984 + Faap20 protein_coding processed_transcript MGP_WSBEiJ_T0068543.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797083 157803639 + Faap20 protein_coding processed_transcript MGP_WSBEiJ_T0068544.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797151 157803863 + MGP_WSBEiJ_P0068544 Faap20 protein_coding protein_coding MGP_WSBEiJ_T0068545.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797151 157803859 + MGP_WSBEiJ_P0068545 Faap20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068546.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797174 157803559 + MGP_WSBEiJ_P0068546 Faap20 protein_coding protein_coding MGP_WSBEiJ_T0068547.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797188 157803860 + MGP_WSBEiJ_P0068547 Faap20 protein_coding protein_coding MGP_WSBEiJ_T0068548.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797505 157803594 + MGP_WSBEiJ_P0068548 Faap20 protein_coding protein_coding MGP_WSBEiJ_T0068549.1 MGP_WSBEiJ_G0028405.1 mouse_genomes_project 4 157797869 157803624 + Faap20 protein_coding retained_intron MGP_WSBEiJ_T0064854.1 MGP_WSBEiJ_G0027582.1 mouse_genomes_project 4 61907936 61946970 - MGP_WSBEiJ_P0064854 Akna protein_coding protein_coding MGP_WSBEiJ_T0064855.1 MGP_WSBEiJ_G0027582.1 mouse_genomes_project 4 61920658 61921938 - Akna protein_coding processed_transcript MGP_WSBEiJ_T0068109.1 MGP_WSBEiJ_G0028327.1 mouse_genomes_project 4 151056905 151204035 - MGP_WSBEiJ_P0068109 Pex14 protein_coding protein_coding MGP_WSBEiJ_T0068110.1 MGP_WSBEiJ_G0028327.1 mouse_genomes_project 4 151059607 151203975 - Pex14 protein_coding retained_intron MGP_WSBEiJ_T0068111.1 MGP_WSBEiJ_G0028327.1 mouse_genomes_project 4 151081238 151203974 - Pex14 protein_coding processed_transcript MGP_WSBEiJ_T0068112.1 MGP_WSBEiJ_G0028327.1 mouse_genomes_project 4 151081989 151203968 - MGP_WSBEiJ_P0068112 Pex14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068113.1 MGP_WSBEiJ_G0028327.1 mouse_genomes_project 4 151112606 151203987 - Pex14 protein_coding processed_transcript MGP_WSBEiJ_T0007737.1 MGP_WSBEiJ_G0006329.1 mouse_genomes_project 4 55575152 55582374 + Gm12536 lincRNA lincRNA MGP_WSBEiJ_T0014216.1 MGP_WSBEiJ_G0012346.1 mouse_genomes_project 4 83464310 83464617 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099501.1 MGP_WSBEiJ_G0038164.1 mouse_genomes_project 4 18203342 18203427 + Gm25977 snoRNA snoRNA MGP_WSBEiJ_T0004404.1 MGP_WSBEiJ_G0003831.1 mouse_genomes_project 4 97729737 97731187 + 0610025J13Rik antisense antisense MGP_WSBEiJ_T0004405.1 MGP_WSBEiJ_G0003831.1 mouse_genomes_project 4 97729787 97739976 + 0610025J13Rik antisense antisense MGP_WSBEiJ_T0004406.1 MGP_WSBEiJ_G0003831.1 mouse_genomes_project 4 97729787 97739976 + 0610025J13Rik antisense antisense MGP_WSBEiJ_T0067843.1 MGP_WSBEiJ_G0028252.1 mouse_genomes_project 4 142952150 142965469 - MGP_WSBEiJ_P0067843 Clcnka protein_coding protein_coding MGP_WSBEiJ_T0067844.1 MGP_WSBEiJ_G0028252.1 mouse_genomes_project 4 142952150 142965995 - MGP_WSBEiJ_P0067844 Clcnka protein_coding protein_coding MGP_WSBEiJ_T0067845.1 MGP_WSBEiJ_G0028252.1 mouse_genomes_project 4 142958840 142962156 - Clcnka protein_coding retained_intron MGP_WSBEiJ_T0067846.1 MGP_WSBEiJ_G0028252.1 mouse_genomes_project 4 142962447 142965845 - MGP_WSBEiJ_P0067846 Clcnka protein_coding protein_coding MGP_WSBEiJ_T0097052.1 MGP_WSBEiJ_G0035733.1 mouse_genomes_project 4 52011132 52011251 + n-R5s185 rRNA rRNA MGP_WSBEiJ_T0067094.1 MGP_WSBEiJ_G0028079.1 mouse_genomes_project 4 133121413 133195377 - MGP_WSBEiJ_P0067094 Phactr4 protein_coding protein_coding MGP_WSBEiJ_T0067095.1 MGP_WSBEiJ_G0028079.1 mouse_genomes_project 4 133121420 133195334 - MGP_WSBEiJ_P0067095 Phactr4 protein_coding protein_coding MGP_WSBEiJ_T0067096.1 MGP_WSBEiJ_G0028079.1 mouse_genomes_project 4 133123789 133169952 - MGP_WSBEiJ_P0067096 Phactr4 protein_coding protein_coding MGP_WSBEiJ_T0067097.1 MGP_WSBEiJ_G0028079.1 mouse_genomes_project 4 133126192 133136884 - Phactr4 protein_coding processed_transcript MGP_WSBEiJ_T0067098.1 MGP_WSBEiJ_G0028079.1 mouse_genomes_project 4 133137303 133195329 - MGP_WSBEiJ_P0067098 Phactr4 protein_coding protein_coding MGP_WSBEiJ_T0067099.1 MGP_WSBEiJ_G0028079.1 mouse_genomes_project 4 133144612 133169940 - MGP_WSBEiJ_P0067099 Phactr4 protein_coding protein_coding MGP_WSBEiJ_T0010455.1 MGP_WSBEiJ_G0008612.1 mouse_genomes_project 4 130385795 130385867 - Mir7016 miRNA miRNA MGP_WSBEiJ_T0014233.1 MGP_WSBEiJ_G0012363.1 mouse_genomes_project 4 90201666 90202161 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007902.1 MGP_WSBEiJ_G0006459.1 mouse_genomes_project 4 155552232 155553590 - Gm13173 lincRNA lincRNA MGP_WSBEiJ_T0099574.1 MGP_WSBEiJ_G0038237.1 mouse_genomes_project 4 133118309 133118514 - Snora73a snoRNA snoRNA MGP_WSBEiJ_T0017516.1 MGP_WSBEiJ_G0015002.1 mouse_genomes_project 4 142351092 142357672 + Gm13032 processed_transcript processed_transcript MGP_WSBEiJ_T0014248.1 MGP_WSBEiJ_G0012378.1 mouse_genomes_project 4 95449844 95450123 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065910.1 MGP_WSBEiJ_G0027817.1 mouse_genomes_project 4 115600871 115616005 + MGP_WSBEiJ_P0065910 Atpaf1 protein_coding protein_coding MGP_WSBEiJ_T0065911.1 MGP_WSBEiJ_G0027817.1 mouse_genomes_project 4 115601039 115630840 + MGP_WSBEiJ_P0065911 Atpaf1 protein_coding protein_coding MGP_WSBEiJ_T0065912.1 MGP_WSBEiJ_G0027817.1 mouse_genomes_project 4 115601272 115630833 + MGP_WSBEiJ_P0065912 Atpaf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065914.1 MGP_WSBEiJ_G0027817.1 mouse_genomes_project 4 115618383 115635250 + MGP_WSBEiJ_P0065914 Atpaf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001375.1 MGP_WSBEiJ_G0001304.1 mouse_genomes_project 4 42425756 42428067 + TEC TEC MGP_WSBEiJ_T0065356.1 MGP_WSBEiJ_G0027704.1 mouse_genomes_project 4 100956357 101012327 + MGP_WSBEiJ_P0065356 Ak4 protein_coding protein_coding MGP_WSBEiJ_T0065357.1 MGP_WSBEiJ_G0027704.1 mouse_genomes_project 4 100956369 101012327 + MGP_WSBEiJ_P0065357 Ak4 protein_coding protein_coding MGP_WSBEiJ_T0065358.1 MGP_WSBEiJ_G0027704.1 mouse_genomes_project 4 100956399 101012327 + MGP_WSBEiJ_P0065358 Ak4 protein_coding protein_coding MGP_WSBEiJ_T0065359.1 MGP_WSBEiJ_G0027704.1 mouse_genomes_project 4 100957844 101005909 + MGP_WSBEiJ_P0065359 Ak4 protein_coding protein_coding MGP_WSBEiJ_T0065360.1 MGP_WSBEiJ_G0027704.1 mouse_genomes_project 4 100957871 101008331 + MGP_WSBEiJ_P0065360 Ak4 protein_coding protein_coding MGP_WSBEiJ_T0065361.1 MGP_WSBEiJ_G0027704.1 mouse_genomes_project 4 100958635 101009012 + Ak4 protein_coding processed_transcript MGP_WSBEiJ_T0065362.1 MGP_WSBEiJ_G0027704.1 mouse_genomes_project 4 100992522 101009111 + MGP_WSBEiJ_P0065362 Ak4 protein_coding protein_coding MGP_WSBEiJ_T0064985.1 MGP_WSBEiJ_G0027612.1 mouse_genomes_project 4 81810941 81873372 - MGP_WSBEiJ_P0064985 Zdhhc21 protein_coding protein_coding MGP_WSBEiJ_T0064986.1 MGP_WSBEiJ_G0027612.1 mouse_genomes_project 4 81816242 81873260 - MGP_WSBEiJ_P0064986 Zdhhc21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064987.1 MGP_WSBEiJ_G0027612.1 mouse_genomes_project 4 81818404 81873657 - MGP_WSBEiJ_P0064987 Zdhhc21 protein_coding protein_coding MGP_WSBEiJ_T0064988.1 MGP_WSBEiJ_G0027612.1 mouse_genomes_project 4 81850307 81863126 - MGP_WSBEiJ_P0064988 Zdhhc21 protein_coding protein_coding MGP_WSBEiJ_T0064989.1 MGP_WSBEiJ_G0027612.1 mouse_genomes_project 4 81852364 81873253 - Zdhhc21 protein_coding retained_intron MGP_WSBEiJ_T0064990.1 MGP_WSBEiJ_G0027612.1 mouse_genomes_project 4 81859929 81873272 - MGP_WSBEiJ_P0064990 Zdhhc21 protein_coding protein_coding MGP_WSBEiJ_T0017481.1 MGP_WSBEiJ_G0014985.1 mouse_genomes_project 4 105967246 106019610 + Gm12724 processed_transcript processed_transcript MGP_WSBEiJ_T0064871.1 MGP_WSBEiJ_G0027584.1 mouse_genomes_project 4 62114631 62141768 + MGP_WSBEiJ_P0064871 Tmem268 protein_coding protein_coding MGP_WSBEiJ_T0064872.1 MGP_WSBEiJ_G0027584.1 mouse_genomes_project 4 62114706 62118342 + Tmem268 protein_coding processed_transcript MGP_WSBEiJ_T0064873.1 MGP_WSBEiJ_G0027584.1 mouse_genomes_project 4 62116077 62127454 + MGP_WSBEiJ_P0064873 Tmem268 protein_coding protein_coding MGP_WSBEiJ_T0064874.1 MGP_WSBEiJ_G0027584.1 mouse_genomes_project 4 62116077 62127485 + MGP_WSBEiJ_P0064874 Tmem268 protein_coding protein_coding MGP_WSBEiJ_T0064875.1 MGP_WSBEiJ_G0027584.1 mouse_genomes_project 4 62116210 62141764 + MGP_WSBEiJ_P0064875 Tmem268 protein_coding protein_coding MGP_WSBEiJ_T0065326.1 MGP_WSBEiJ_G0027695.1 mouse_genomes_project 4 99276283 99353312 - MGP_WSBEiJ_P0065326 Itgb3bp protein_coding protein_coding MGP_WSBEiJ_T0065327.1 MGP_WSBEiJ_G0027695.1 mouse_genomes_project 4 99276783 99432121 - Itgb3bp protein_coding processed_transcript MGP_WSBEiJ_T0065328.1 MGP_WSBEiJ_G0027695.1 mouse_genomes_project 4 99278212 99353218 - Itgb3bp protein_coding processed_transcript MGP_WSBEiJ_T0065329.1 MGP_WSBEiJ_G0027695.1 mouse_genomes_project 4 99282879 99353260 - Itgb3bp protein_coding processed_transcript MGP_WSBEiJ_T0063839.1 MGP_WSBEiJ_G0027345.1 mouse_genomes_project 4 30156014 30198465 + MGP_WSBEiJ_P0063839 Rragd protein_coding protein_coding MGP_WSBEiJ_T0063840.1 MGP_WSBEiJ_G0027345.1 mouse_genomes_project 4 30156132 30198465 + MGP_WSBEiJ_P0063840 Rragd protein_coding protein_coding MGP_WSBEiJ_T0063841.1 MGP_WSBEiJ_G0027345.1 mouse_genomes_project 4 30156427 30198465 + MGP_WSBEiJ_P0063841 Rragd protein_coding protein_coding MGP_WSBEiJ_T0063842.1 MGP_WSBEiJ_G0027345.1 mouse_genomes_project 4 30180779 30195101 + Rragd protein_coding processed_transcript MGP_WSBEiJ_T0014008.1 MGP_WSBEiJ_G0012138.1 mouse_genomes_project 4 7457039 7458225 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066364.1 MGP_WSBEiJ_G0027912.1 mouse_genomes_project 4 119710393 119712171 + MGP_WSBEiJ_P0066364 Guca2a protein_coding protein_coding MGP_WSBEiJ_T0067416.1 MGP_WSBEiJ_G0028149.1 mouse_genomes_project 4 136409827 136439707 - MGP_WSBEiJ_P0067416 Ncmap protein_coding protein_coding MGP_WSBEiJ_T0067417.1 MGP_WSBEiJ_G0028149.1 mouse_genomes_project 4 136409827 136427163 - MGP_WSBEiJ_P0067417 Ncmap protein_coding protein_coding MGP_WSBEiJ_T0067418.1 MGP_WSBEiJ_G0028149.1 mouse_genomes_project 4 136409827 136439676 - MGP_WSBEiJ_P0067418 Ncmap protein_coding protein_coding MGP_WSBEiJ_T0067419.1 MGP_WSBEiJ_G0028149.1 mouse_genomes_project 4 136409828 136427180 - MGP_WSBEiJ_P0067419 Ncmap protein_coding protein_coding MGP_WSBEiJ_T0067420.1 MGP_WSBEiJ_G0028149.1 mouse_genomes_project 4 136410480 136427153 - MGP_WSBEiJ_P0067420 Ncmap protein_coding protein_coding MGP_WSBEiJ_T0067421.1 MGP_WSBEiJ_G0028149.1 mouse_genomes_project 4 136410770 136414875 - Ncmap protein_coding processed_transcript MGP_WSBEiJ_T0067422.1 MGP_WSBEiJ_G0028149.1 mouse_genomes_project 4 136410905 136427180 - MGP_WSBEiJ_P0067422 Ncmap protein_coding protein_coding MGP_WSBEiJ_T0067423.1 MGP_WSBEiJ_G0028149.1 mouse_genomes_project 4 136412180 136439713 - MGP_WSBEiJ_P0067423 Ncmap protein_coding protein_coding MGP_WSBEiJ_T0010465.1 MGP_WSBEiJ_G0008622.1 mouse_genomes_project 4 135542790 135542919 - Mir6403 miRNA miRNA MGP_WSBEiJ_T0067853.1 MGP_WSBEiJ_G0028256.1 mouse_genomes_project 4 143019114 143041412 + MGP_WSBEiJ_P0067853 Zbtb17 protein_coding protein_coding MGP_WSBEiJ_T0067854.1 MGP_WSBEiJ_G0028256.1 mouse_genomes_project 4 143019144 143042117 + Zbtb17 protein_coding processed_transcript MGP_WSBEiJ_T0067855.1 MGP_WSBEiJ_G0028256.1 mouse_genomes_project 4 143019159 143041412 + Zbtb17 protein_coding processed_transcript MGP_WSBEiJ_T0067856.1 MGP_WSBEiJ_G0028256.1 mouse_genomes_project 4 143019166 143033509 + Zbtb17 protein_coding processed_transcript MGP_WSBEiJ_T0067857.1 MGP_WSBEiJ_G0028256.1 mouse_genomes_project 4 143037569 143039234 + Zbtb17 protein_coding processed_transcript MGP_WSBEiJ_T0067858.1 MGP_WSBEiJ_G0028256.1 mouse_genomes_project 4 143039004 143040255 + Zbtb17 protein_coding processed_transcript MGP_WSBEiJ_T0067859.1 MGP_WSBEiJ_G0028256.1 mouse_genomes_project 4 143039601 143041256 + Zbtb17 protein_coding processed_transcript MGP_WSBEiJ_T0064223.1 MGP_WSBEiJ_G0027428.1 mouse_genomes_project 4 41158417 41166313 + MGP_WSBEiJ_P0064223 Car9 protein_coding protein_coding MGP_WSBEiJ_T0064224.1 MGP_WSBEiJ_G0027428.1 mouse_genomes_project 4 41158436 41166292 + Car9 protein_coding processed_transcript MGP_WSBEiJ_T0064225.1 MGP_WSBEiJ_G0027428.1 mouse_genomes_project 4 41158724 41165621 + MGP_WSBEiJ_P0064225 Car9 protein_coding protein_coding MGP_WSBEiJ_T0064226.1 MGP_WSBEiJ_G0027428.1 mouse_genomes_project 4 41159283 41160416 + Car9 protein_coding processed_transcript MGP_WSBEiJ_T0064227.1 MGP_WSBEiJ_G0027428.1 mouse_genomes_project 4 41159972 41160477 + Car9 protein_coding processed_transcript MGP_WSBEiJ_T0064228.1 MGP_WSBEiJ_G0027428.1 mouse_genomes_project 4 41160378 41165018 + Car9 protein_coding processed_transcript MGP_WSBEiJ_T0064229.1 MGP_WSBEiJ_G0027428.1 mouse_genomes_project 4 41164694 41165505 + Car9 protein_coding processed_transcript MGP_WSBEiJ_T0099512.1 MGP_WSBEiJ_G0038175.1 mouse_genomes_project 4 38727456 38727534 - Gm23090 snoRNA snoRNA MGP_WSBEiJ_T0064276.1 MGP_WSBEiJ_G0027436.1 mouse_genomes_project 4 41315892 41316717 - MGP_WSBEiJ_P0064276 Spag8 protein_coding protein_coding MGP_WSBEiJ_T0064277.1 MGP_WSBEiJ_G0027436.1 mouse_genomes_project 4 41315892 41318110 - MGP_WSBEiJ_P0064277 Spag8 protein_coding protein_coding MGP_WSBEiJ_T0064278.1 MGP_WSBEiJ_G0027436.1 mouse_genomes_project 4 41316233 41318152 - MGP_WSBEiJ_P0064278 Spag8 protein_coding protein_coding MGP_WSBEiJ_T0068279.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154238934 154292905 + MGP_WSBEiJ_P0068279 Dnajc11 protein_coding protein_coding MGP_WSBEiJ_T0068280.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154238974 154287455 + Dnajc11 protein_coding retained_intron MGP_WSBEiJ_T0068281.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154238977 154266015 + Dnajc11 protein_coding retained_intron MGP_WSBEiJ_T0068282.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154238982 154291986 + Dnajc11 protein_coding retained_intron MGP_WSBEiJ_T0068283.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154238987 154291990 + MGP_WSBEiJ_P0068283 Dnajc11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068284.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154254280 154278786 + MGP_WSBEiJ_P0068284 Dnajc11 protein_coding protein_coding MGP_WSBEiJ_T0068285.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154265649 154281706 + Dnajc11 protein_coding processed_transcript MGP_WSBEiJ_T0068286.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154278008 154284493 + Dnajc11 protein_coding processed_transcript MGP_WSBEiJ_T0068287.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154279921 154287815 + Dnajc11 protein_coding retained_intron MGP_WSBEiJ_T0068288.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154279990 154281703 + Dnajc11 protein_coding retained_intron MGP_WSBEiJ_T0068289.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154289750 154291504 + Dnajc11 protein_coding retained_intron MGP_WSBEiJ_T0068290.1 MGP_WSBEiJ_G0028359.1 mouse_genomes_project 4 154290509 154291995 + Dnajc11 protein_coding retained_intron MGP_WSBEiJ_T0014266.1 MGP_WSBEiJ_G0012396.1 mouse_genomes_project 4 100957959 101008999 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067525.1 MGP_WSBEiJ_G0028174.1 mouse_genomes_project 4 137581651 137583353 + MGP_WSBEiJ_P0067525 6030445D17Rik protein_coding protein_coding MGP_WSBEiJ_T0064694.1 MGP_WSBEiJ_G0027540.1 mouse_genomes_project 4 56358328 56533519 - MGP_WSBEiJ_P0064694 Svep1 protein_coding protein_coding MGP_WSBEiJ_T0064695.1 MGP_WSBEiJ_G0027540.1 mouse_genomes_project 4 56462450 56533535 - Svep1 protein_coding processed_transcript MGP_WSBEiJ_T0064696.1 MGP_WSBEiJ_G0027540.1 mouse_genomes_project 4 56463812 56533781 - Svep1 protein_coding processed_transcript MGP_WSBEiJ_T0064697.1 MGP_WSBEiJ_G0027540.1 mouse_genomes_project 4 56503973 56533611 - Svep1 protein_coding processed_transcript MGP_WSBEiJ_T0066633.1 MGP_WSBEiJ_G0027987.1 mouse_genomes_project 4 126787546 126792869 - Adprhl2 protein_coding processed_transcript MGP_WSBEiJ_T0066634.1 MGP_WSBEiJ_G0027987.1 mouse_genomes_project 4 126787546 126793203 - MGP_WSBEiJ_P0066634 Adprhl2 protein_coding protein_coding MGP_WSBEiJ_T0066635.1 MGP_WSBEiJ_G0027987.1 mouse_genomes_project 4 126787551 126792967 - Adprhl2 protein_coding processed_transcript MGP_WSBEiJ_T0066636.1 MGP_WSBEiJ_G0027987.1 mouse_genomes_project 4 126789650 126792861 - Adprhl2 protein_coding processed_transcript MGP_WSBEiJ_T0099496.1 MGP_WSBEiJ_G0038159.1 mouse_genomes_project 4 2324240 2324366 - Gm24337 snoRNA snoRNA MGP_WSBEiJ_T0099563.1 MGP_WSBEiJ_G0038226.1 mouse_genomes_project 4 131372322 131372395 + Snord85 snoRNA snoRNA MGP_WSBEiJ_T0100815.1 MGP_WSBEiJ_G0039273.1 mouse_genomes_project 4 87854095 87855487 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097050.1 MGP_WSBEiJ_G0035731.1 mouse_genomes_project 4 41357209 41357341 + Gm23257 rRNA rRNA MGP_WSBEiJ_T0004351.1 MGP_WSBEiJ_G0003791.1 mouse_genomes_project 4 11778252 11788668 + Gm11844 antisense antisense MGP_WSBEiJ_T0099547.1 MGP_WSBEiJ_G0038210.1 mouse_genomes_project 4 103210198 103210327 - Gm25877 snoRNA snoRNA MGP_WSBEiJ_T0065289.1 MGP_WSBEiJ_G0027688.1 mouse_genomes_project 4 98377526 98391752 + MGP_WSBEiJ_P0065289 Usp1 protein_coding protein_coding MGP_WSBEiJ_T0065290.1 MGP_WSBEiJ_G0027688.1 mouse_genomes_project 4 98377595 98391752 + MGP_WSBEiJ_P0065290 Usp1 protein_coding protein_coding MGP_WSBEiJ_T0065291.1 MGP_WSBEiJ_G0027688.1 mouse_genomes_project 4 98377680 98381886 + MGP_WSBEiJ_P0065291 Usp1 protein_coding protein_coding MGP_WSBEiJ_T0065292.1 MGP_WSBEiJ_G0027688.1 mouse_genomes_project 4 98381712 98384497 + MGP_WSBEiJ_P0065292 Usp1 protein_coding protein_coding MGP_WSBEiJ_T0010446.1 MGP_WSBEiJ_G0008603.1 mouse_genomes_project 4 120909970 120910062 - Mir30e miRNA miRNA MGP_WSBEiJ_T0063459.1 MGP_WSBEiJ_G0027257.1 mouse_genomes_project 4 465209 470410 - MGP_WSBEiJ_P0063459 Rps20 protein_coding protein_coding MGP_WSBEiJ_T0063460.1 MGP_WSBEiJ_G0027257.1 mouse_genomes_project 4 469214 469978 - Rps20 protein_coding retained_intron MGP_WSBEiJ_T0063461.1 MGP_WSBEiJ_G0027257.1 mouse_genomes_project 4 469217 470233 - Rps20 protein_coding retained_intron MGP_WSBEiJ_T0063637.1 MGP_WSBEiJ_G0027293.1 mouse_genomes_project 4 8819668 8889816 + MGP_WSBEiJ_P0063637 Rbm12b1 protein_coding protein_coding MGP_WSBEiJ_T0063638.1 MGP_WSBEiJ_G0027293.1 mouse_genomes_project 4 8819670 8889918 + MGP_WSBEiJ_P0063638 Rbm12b1 protein_coding protein_coding MGP_WSBEiJ_T0064372.1 MGP_WSBEiJ_G0027453.1 mouse_genomes_project 4 42726365 42735789 + MGP_WSBEiJ_P0064372 Grhpr protein_coding protein_coding MGP_WSBEiJ_T0064373.1 MGP_WSBEiJ_G0027453.1 mouse_genomes_project 4 42726373 42728908 + MGP_WSBEiJ_P0064373 Grhpr protein_coding protein_coding MGP_WSBEiJ_T0064374.1 MGP_WSBEiJ_G0027453.1 mouse_genomes_project 4 42726402 42734065 + MGP_WSBEiJ_P0064374 Grhpr protein_coding protein_coding MGP_WSBEiJ_T0064375.1 MGP_WSBEiJ_G0027453.1 mouse_genomes_project 4 42726403 42732377 + Grhpr protein_coding processed_transcript MGP_WSBEiJ_T0064376.1 MGP_WSBEiJ_G0027453.1 mouse_genomes_project 4 42726431 42732298 + MGP_WSBEiJ_P0064376 Grhpr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064377.1 MGP_WSBEiJ_G0027453.1 mouse_genomes_project 4 42726470 42731335 + Grhpr protein_coding processed_transcript MGP_WSBEiJ_T0014225.1 MGP_WSBEiJ_G0012355.1 mouse_genomes_project 4 87394178 87394453 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099506.1 MGP_WSBEiJ_G0038169.1 mouse_genomes_project 4 31260492 31260579 + Gm22010 snoRNA snoRNA MGP_WSBEiJ_T0063787.1 MGP_WSBEiJ_G0027336.1 mouse_genomes_project 4 23211706 23236538 - MGP_WSBEiJ_P0063787 Manea protein_coding protein_coding MGP_WSBEiJ_T0063788.1 MGP_WSBEiJ_G0027336.1 mouse_genomes_project 4 23215241 23228472 - Manea protein_coding processed_transcript MGP_WSBEiJ_T0063789.1 MGP_WSBEiJ_G0027336.1 mouse_genomes_project 4 23228036 23236501 - Manea protein_coding processed_transcript MGP_WSBEiJ_T0063790.1 MGP_WSBEiJ_G0027336.1 mouse_genomes_project 4 23228327 23236538 - MGP_WSBEiJ_P0063790 Manea protein_coding protein_coding MGP_WSBEiJ_T0098297.1 MGP_WSBEiJ_G0036960.1 mouse_genomes_project 4 130139668 130139808 + Gm24621 snRNA snRNA MGP_WSBEiJ_T0098288.1 MGP_WSBEiJ_G0036951.1 mouse_genomes_project 4 117129095 117129211 + Gm23287 snRNA snRNA MGP_WSBEiJ_T0067017.1 MGP_WSBEiJ_G0028066.1 mouse_genomes_project 4 132474185 132546405 - MGP_WSBEiJ_P0067017 Ptpru protein_coding protein_coding MGP_WSBEiJ_T0067018.1 MGP_WSBEiJ_G0028066.1 mouse_genomes_project 4 132474186 132474650 - Ptpru protein_coding processed_transcript MGP_WSBEiJ_T0067019.1 MGP_WSBEiJ_G0028066.1 mouse_genomes_project 4 132475226 132546348 - MGP_WSBEiJ_P0067019 Ptpru protein_coding protein_coding MGP_WSBEiJ_T0067020.1 MGP_WSBEiJ_G0028066.1 mouse_genomes_project 4 132477864 132546369 - Ptpru protein_coding processed_transcript MGP_WSBEiJ_T0067021.1 MGP_WSBEiJ_G0028066.1 mouse_genomes_project 4 132488960 132529641 - MGP_WSBEiJ_P0067021 Ptpru protein_coding protein_coding MGP_WSBEiJ_T0067022.1 MGP_WSBEiJ_G0028066.1 mouse_genomes_project 4 132494263 132508530 - Ptpru protein_coding processed_transcript MGP_WSBEiJ_T0067023.1 MGP_WSBEiJ_G0028066.1 mouse_genomes_project 4 132499306 132504073 - Ptpru protein_coding retained_intron MGP_WSBEiJ_T0067024.1 MGP_WSBEiJ_G0028066.1 mouse_genomes_project 4 132505273 132509154 - Ptpru protein_coding retained_intron MGP_WSBEiJ_T0068213.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152419941 152429738 + MGP_WSBEiJ_P0068213 Eno1 protein_coding protein_coding MGP_WSBEiJ_T0068214.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152420172 152436682 + MGP_WSBEiJ_P0068214 Eno1 protein_coding protein_coding MGP_WSBEiJ_T0068215.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152420460 152428177 + Eno1 protein_coding retained_intron MGP_WSBEiJ_T0068216.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152420460 152430797 + MGP_WSBEiJ_P0068216 Eno1 protein_coding protein_coding MGP_WSBEiJ_T0068217.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152420463 152423165 + Eno1 protein_coding retained_intron MGP_WSBEiJ_T0068218.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152420925 152427592 + MGP_WSBEiJ_P0068218 Eno1 protein_coding protein_coding MGP_WSBEiJ_T0068219.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152428934 152436676 + MGP_WSBEiJ_P0068219 Eno1 protein_coding protein_coding MGP_WSBEiJ_T0068220.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152429683 152434887 + Eno1 protein_coding retained_intron MGP_WSBEiJ_T0068221.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152433302 152435552 + Eno1 protein_coding retained_intron MGP_WSBEiJ_T0068222.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152435454 152436282 + Eno1 protein_coding retained_intron MGP_WSBEiJ_T0068223.1 MGP_WSBEiJ_G0028348.1 mouse_genomes_project 4 152435559 152436591 + Eno1 protein_coding retained_intron MGP_WSBEiJ_T0066122.1 MGP_WSBEiJ_G0027857.1 mouse_genomes_project 4 117130814 117175737 - MGP_WSBEiJ_P0066122 Gm1661 protein_coding protein_coding MGP_WSBEiJ_T0066123.1 MGP_WSBEiJ_G0027857.1 mouse_genomes_project 4 117132684 117175737 - MGP_WSBEiJ_P0066123 Gm1661 protein_coding protein_coding MGP_WSBEiJ_T0066124.1 MGP_WSBEiJ_G0027857.1 mouse_genomes_project 4 117162190 117175945 - Gm1661 protein_coding processed_transcript MGP_WSBEiJ_T0099514.1 MGP_WSBEiJ_G0038177.1 mouse_genomes_project 4 42123475 42123602 - Gm24376 snoRNA snoRNA MGP_WSBEiJ_T0064551.1 MGP_WSBEiJ_G0027496.1 mouse_genomes_project 4 47379005 47388882 - MGP_WSBEiJ_P0064551 protein_coding protein_coding MGP_WSBEiJ_T0067961.1 MGP_WSBEiJ_G0028292.1 mouse_genomes_project 4 146412482 146423895 + MGP_WSBEiJ_P0067961 Gm13177 protein_coding protein_coding MGP_WSBEiJ_T0001396.1 MGP_WSBEiJ_G0001324.1 mouse_genomes_project 4 158618265 158622526 - TEC TEC MGP_WSBEiJ_T0014294.1 MGP_WSBEiJ_G0012424.1 mouse_genomes_project 4 111227998 111228997 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067696.1 MGP_WSBEiJ_G0028218.1 mouse_genomes_project 4 140460973 140475307 - MGP_WSBEiJ_P0067696 Nbl1 protein_coding protein_coding MGP_WSBEiJ_T0067697.1 MGP_WSBEiJ_G0028218.1 mouse_genomes_project 4 140461896 140474419 - Nbl1 protein_coding processed_transcript MGP_WSBEiJ_T0067698.1 MGP_WSBEiJ_G0028218.1 mouse_genomes_project 4 140474388 140475282 - Nbl1 protein_coding processed_transcript MGP_WSBEiJ_T0014047.1 MGP_WSBEiJ_G0012177.1 mouse_genomes_project 4 19545528 19546229 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097048.1 MGP_WSBEiJ_G0035729.1 mouse_genomes_project 4 9561246 9561353 + n-R5s182 rRNA rRNA MGP_WSBEiJ_T0067838.1 MGP_WSBEiJ_G0028250.1 mouse_genomes_project 4 142864479 142892726 + MGP_WSBEiJ_P0067838 Epha2 protein_coding protein_coding MGP_WSBEiJ_T0067839.1 MGP_WSBEiJ_G0028250.1 mouse_genomes_project 4 142865649 142872042 + Epha2 protein_coding processed_transcript MGP_WSBEiJ_T0067840.1 MGP_WSBEiJ_G0028250.1 mouse_genomes_project 4 142872201 142874281 + Epha2 protein_coding processed_transcript MGP_WSBEiJ_T0067841.1 MGP_WSBEiJ_G0028250.1 mouse_genomes_project 4 142880245 142884286 + Epha2 protein_coding processed_transcript MGP_WSBEiJ_T0065380.1 MGP_WSBEiJ_G0027711.1 mouse_genomes_project 4 101549670 101554827 + MGP_WSBEiJ_P0065380 protein_coding protein_coding MGP_WSBEiJ_T0014045.1 MGP_WSBEiJ_G0012175.1 mouse_genomes_project 4 19123600 19124106 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007670.1 MGP_WSBEiJ_G0006273.1 mouse_genomes_project 4 227839 235014 + 2210414B05Rik lincRNA lincRNA MGP_WSBEiJ_T0014058.1 MGP_WSBEiJ_G0012188.1 mouse_genomes_project 4 23340434 23341159 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067427.1 MGP_WSBEiJ_G0028151.1 mouse_genomes_project 4 136489582 136537087 - MGP_WSBEiJ_P0067427 Nipal3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067428.1 MGP_WSBEiJ_G0028151.1 mouse_genomes_project 4 136490299 136537087 - MGP_WSBEiJ_P0067428 Nipal3 protein_coding protein_coding MGP_WSBEiJ_T0067429.1 MGP_WSBEiJ_G0028151.1 mouse_genomes_project 4 136492840 136537204 - MGP_WSBEiJ_P0067429 Nipal3 protein_coding protein_coding MGP_WSBEiJ_T0067430.1 MGP_WSBEiJ_G0028151.1 mouse_genomes_project 4 136495828 136512585 - MGP_WSBEiJ_P0067430 Nipal3 protein_coding protein_coding MGP_WSBEiJ_T0067431.1 MGP_WSBEiJ_G0028151.1 mouse_genomes_project 4 136496119 136499009 - Nipal3 protein_coding processed_transcript MGP_WSBEiJ_T0067432.1 MGP_WSBEiJ_G0028151.1 mouse_genomes_project 4 136496209 136499281 - Nipal3 protein_coding processed_transcript MGP_WSBEiJ_T0067433.1 MGP_WSBEiJ_G0028151.1 mouse_genomes_project 4 136518902 136537549 - MGP_WSBEiJ_P0067433 Nipal3 protein_coding protein_coding MGP_WSBEiJ_T0067434.1 MGP_WSBEiJ_G0028151.1 mouse_genomes_project 4 136521813 136537618 - MGP_WSBEiJ_P0067434 Nipal3 protein_coding protein_coding MGP_WSBEiJ_T0064557.1 MGP_WSBEiJ_G0027500.1 mouse_genomes_project 4 47541813 47552784 + MGP_WSBEiJ_P0064557 Zfp189 protein_coding protein_coding MGP_WSBEiJ_T0064558.1 MGP_WSBEiJ_G0027500.1 mouse_genomes_project 4 47541854 47552784 + MGP_WSBEiJ_P0064558 Zfp189 protein_coding protein_coding MGP_WSBEiJ_T0064728.1 MGP_WSBEiJ_G0027547.1 mouse_genomes_project 4 57375386 57400537 + MGP_WSBEiJ_P0064728 Dnajc25 protein_coding protein_coding MGP_WSBEiJ_T0064729.1 MGP_WSBEiJ_G0027547.1 mouse_genomes_project 4 57383558 57405152 + MGP_WSBEiJ_P0064729 Dnajc25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064730.1 MGP_WSBEiJ_G0027547.1 mouse_genomes_project 4 57383569 57405152 + MGP_WSBEiJ_P0064730 Dnajc25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064732.1 MGP_WSBEiJ_G0027547.1 mouse_genomes_project 4 57383607 57403008 + MGP_WSBEiJ_P0064732 Dnajc25 protein_coding protein_coding MGP_WSBEiJ_T0064508.1 MGP_WSBEiJ_G0027485.1 mouse_genomes_project 4 45381632 45387322 - protein_coding processed_transcript MGP_WSBEiJ_T0064509.1 MGP_WSBEiJ_G0027485.1 mouse_genomes_project 4 45386384 45390775 - MGP_WSBEiJ_P0064509 protein_coding protein_coding MGP_WSBEiJ_T0064510.1 MGP_WSBEiJ_G0027485.1 mouse_genomes_project 4 45388445 45388937 - MGP_WSBEiJ_P0064510 protein_coding protein_coding MGP_WSBEiJ_T0007815.1 MGP_WSBEiJ_G0006393.1 mouse_genomes_project 4 120736157 120742954 + Gm12860 lincRNA lincRNA MGP_WSBEiJ_T0066167.1 MGP_WSBEiJ_G0027866.1 mouse_genomes_project 4 117819211 117833116 - MGP_WSBEiJ_P0066167 B4galt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066174.1 MGP_WSBEiJ_G0027866.1 mouse_genomes_project 4 117822971 117833437 - MGP_WSBEiJ_P0066174 B4galt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066175.1 MGP_WSBEiJ_G0027866.1 mouse_genomes_project 4 117823081 117833448 - MGP_WSBEiJ_P0066175 B4galt2 protein_coding protein_coding MGP_WSBEiJ_T0066176.1 MGP_WSBEiJ_G0027866.1 mouse_genomes_project 4 117823252 117833073 - MGP_WSBEiJ_P0066176 B4galt2 protein_coding protein_coding MGP_WSBEiJ_T0066178.1 MGP_WSBEiJ_G0027866.1 mouse_genomes_project 4 117827532 117833116 - MGP_WSBEiJ_P0066178 B4galt2 protein_coding protein_coding MGP_WSBEiJ_T0066179.1 MGP_WSBEiJ_G0027866.1 mouse_genomes_project 4 117830979 117833180 - B4galt2 protein_coding processed_transcript MGP_WSBEiJ_T0066180.1 MGP_WSBEiJ_G0027866.1 mouse_genomes_project 4 117831353 117832252 - MGP_WSBEiJ_P0066180 B4galt2 protein_coding protein_coding MGP_WSBEiJ_T0063913.1 MGP_WSBEiJ_G0027365.1 mouse_genomes_project 4 32235119 32440256 - MGP_WSBEiJ_P0063913 Mob3b protein_coding protein_coding MGP_WSBEiJ_T0063914.1 MGP_WSBEiJ_G0027365.1 mouse_genomes_project 4 32360552 32440256 - Mob3b protein_coding processed_transcript MGP_WSBEiJ_T0067776.1 MGP_WSBEiJ_G0028237.1 mouse_genomes_project 4 142319667 142350748 - MGP_WSBEiJ_P0067776 Padi3 protein_coding protein_coding MGP_WSBEiJ_T0067777.1 MGP_WSBEiJ_G0028237.1 mouse_genomes_project 4 142319671 142341983 - MGP_WSBEiJ_P0067777 Padi3 protein_coding protein_coding MGP_WSBEiJ_T0014064.1 MGP_WSBEiJ_G0012194.1 mouse_genomes_project 4 25014444 25014767 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098308.1 MGP_WSBEiJ_G0036971.1 mouse_genomes_project 4 139922385 139922491 - Gm22961 snRNA snRNA MGP_WSBEiJ_T0066198.1 MGP_WSBEiJ_G0027870.1 mouse_genomes_project 4 117876755 117880356 - MGP_WSBEiJ_P0066198 Artn protein_coding protein_coding MGP_WSBEiJ_T0066199.1 MGP_WSBEiJ_G0027870.1 mouse_genomes_project 4 117876756 117880090 - MGP_WSBEiJ_P0066199 Artn protein_coding protein_coding MGP_WSBEiJ_T0066200.1 MGP_WSBEiJ_G0027870.1 mouse_genomes_project 4 117878634 117880070 - Artn protein_coding processed_transcript MGP_WSBEiJ_T0066201.1 MGP_WSBEiJ_G0027870.1 mouse_genomes_project 4 117878736 117880006 - Artn protein_coding processed_transcript MGP_WSBEiJ_T0066775.1 MGP_WSBEiJ_G0028021.1 mouse_genomes_project 4 129741866 129747971 + MGP_WSBEiJ_P0066775 Tmem54 protein_coding protein_coding MGP_WSBEiJ_T0066776.1 MGP_WSBEiJ_G0028021.1 mouse_genomes_project 4 129741892 129747971 + MGP_WSBEiJ_P0066776 Tmem54 protein_coding protein_coding MGP_WSBEiJ_T0066777.1 MGP_WSBEiJ_G0028021.1 mouse_genomes_project 4 129741919 129747862 + MGP_WSBEiJ_P0066777 Tmem54 protein_coding protein_coding MGP_WSBEiJ_T0066778.1 MGP_WSBEiJ_G0028021.1 mouse_genomes_project 4 129743187 129746889 + MGP_WSBEiJ_P0066778 Tmem54 protein_coding protein_coding MGP_WSBEiJ_T0096820.1 MGP_WSBEiJ_G0035501.1 mouse_genomes_project 4 428397 431068 - pseudogene pseudogene MGP_WSBEiJ_T0010473.1 MGP_WSBEiJ_G0008630.1 mouse_genomes_project 4 141063493 141063563 + Mir7020 miRNA miRNA MGP_WSBEiJ_T0004443.1 MGP_WSBEiJ_G0003861.1 mouse_genomes_project 4 119169551 119174582 - Gm12868 antisense antisense MGP_WSBEiJ_T0014242.1 MGP_WSBEiJ_G0012372.1 mouse_genomes_project 4 93138112 93138370 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064075.1 MGP_WSBEiJ_G0027406.1 mouse_genomes_project 4 39379622 39380288 - MGP_WSBEiJ_P0064075 protein_coding protein_coding MGP_WSBEiJ_T0004356.1 MGP_WSBEiJ_G0003796.1 mouse_genomes_project 4 29716018 29729426 - Bach2os antisense antisense MGP_WSBEiJ_T0004357.1 MGP_WSBEiJ_G0003796.1 mouse_genomes_project 4 29719446 29729381 - Bach2os antisense antisense MGP_WSBEiJ_T0004358.1 MGP_WSBEiJ_G0003796.1 mouse_genomes_project 4 29721991 29729472 - Bach2os antisense antisense MGP_WSBEiJ_T0011365.1 MGP_WSBEiJ_G0009522.1 mouse_genomes_project 4 45519900 45520020 + Gm27668 misc_RNA misc_RNA MGP_WSBEiJ_T0014261.1 MGP_WSBEiJ_G0012391.1 mouse_genomes_project 4 100090629 100091600 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064265.1 MGP_WSBEiJ_G0027434.1 mouse_genomes_project 4 41239637 41240916 - MGP_WSBEiJ_P0064265 Msmp protein_coding protein_coding MGP_WSBEiJ_T0065722.1 MGP_WSBEiJ_G0027776.1 mouse_genomes_project 4 108706065 108707286 - MGP_WSBEiJ_P0065722 A730015C16Rik protein_coding protein_coding MGP_WSBEiJ_T0007784.1 MGP_WSBEiJ_G0006370.1 mouse_genomes_project 4 100829268 100859024 - Gm12796 lincRNA lincRNA MGP_WSBEiJ_T0007812.1 MGP_WSBEiJ_G0006390.1 mouse_genomes_project 4 119013453 119027192 - Gm12865 lincRNA lincRNA MGP_WSBEiJ_T0004445.1 MGP_WSBEiJ_G0003863.1 mouse_genomes_project 4 120384870 120398385 + Foxo6os antisense antisense MGP_WSBEiJ_T0065482.1 MGP_WSBEiJ_G0027735.1 mouse_genomes_project 4 106360635 106378294 + MGP_WSBEiJ_P0065482 Ttc22 protein_coding protein_coding MGP_WSBEiJ_T0065483.1 MGP_WSBEiJ_G0027735.1 mouse_genomes_project 4 106374080 106375732 + Ttc22 protein_coding processed_transcript MGP_WSBEiJ_T0065136.1 MGP_WSBEiJ_G0027640.1 mouse_genomes_project 4 87887798 87888617 - MGP_WSBEiJ_P0065136 Ifna13 protein_coding protein_coding MGP_WSBEiJ_T0064726.1 MGP_WSBEiJ_G0027545.1 mouse_genomes_project 4 57322910 57337619 + MGP_WSBEiJ_P0064726 Zkscan16 protein_coding protein_coding MGP_WSBEiJ_T0014218.1 MGP_WSBEiJ_G0012348.1 mouse_genomes_project 4 83975139 83976081 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014037.1 MGP_WSBEiJ_G0012167.1 mouse_genomes_project 4 15835681 15836619 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067213.1 MGP_WSBEiJ_G0028108.1 mouse_genomes_project 4 134459023 134469943 + MGP_WSBEiJ_P0067213 Gpatch3 protein_coding protein_coding MGP_WSBEiJ_T0067214.1 MGP_WSBEiJ_G0028108.1 mouse_genomes_project 4 134463936 134468691 + Gpatch3 protein_coding processed_transcript MGP_WSBEiJ_T0063624.1 MGP_WSBEiJ_G0027290.1 mouse_genomes_project 4 8669869 8678134 - MGP_WSBEiJ_P0063624 Pdp1 protein_coding protein_coding MGP_WSBEiJ_T0063625.1 MGP_WSBEiJ_G0027290.1 mouse_genomes_project 4 8671488 8677663 - MGP_WSBEiJ_P0063625 Pdp1 protein_coding protein_coding MGP_WSBEiJ_T0063626.1 MGP_WSBEiJ_G0027290.1 mouse_genomes_project 4 8671488 8677503 - MGP_WSBEiJ_P0063626 Pdp1 protein_coding protein_coding MGP_WSBEiJ_T0063627.1 MGP_WSBEiJ_G0027290.1 mouse_genomes_project 4 8671488 8677609 - MGP_WSBEiJ_P0063627 Pdp1 protein_coding protein_coding MGP_WSBEiJ_T0063628.1 MGP_WSBEiJ_G0027290.1 mouse_genomes_project 4 8671488 8678109 - MGP_WSBEiJ_P0063628 Pdp1 protein_coding protein_coding MGP_WSBEiJ_T0063629.1 MGP_WSBEiJ_G0027290.1 mouse_genomes_project 4 8671492 8678102 - MGP_WSBEiJ_P0063629 Pdp1 protein_coding protein_coding MGP_WSBEiJ_T0014034.1 MGP_WSBEiJ_G0012164.1 mouse_genomes_project 4 15320763 15321209 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067995.1 MGP_WSBEiJ_G0028303.1 mouse_genomes_project 4 149854813 149856123 + MGP_WSBEiJ_P0067995 Fv1 protein_coding protein_coding MGP_WSBEiJ_T0068450.1 MGP_WSBEiJ_G0028388.1 mouse_genomes_project 4 156635252 156639986 - MGP_WSBEiJ_P0068450 Tprgl protein_coding protein_coding MGP_WSBEiJ_T0068451.1 MGP_WSBEiJ_G0028388.1 mouse_genomes_project 4 156635907 156639986 - Tprgl protein_coding processed_transcript MGP_WSBEiJ_T0068452.1 MGP_WSBEiJ_G0028388.1 mouse_genomes_project 4 156636123 156639952 - MGP_WSBEiJ_P0068452 Tprgl protein_coding protein_coding MGP_WSBEiJ_T0068453.1 MGP_WSBEiJ_G0028388.1 mouse_genomes_project 4 156636240 156637934 - Tprgl protein_coding processed_transcript MGP_WSBEiJ_T0068454.1 MGP_WSBEiJ_G0028388.1 mouse_genomes_project 4 156637334 156639926 - Tprgl protein_coding processed_transcript MGP_WSBEiJ_T0100840.1 MGP_WSBEiJ_G0039298.1 mouse_genomes_project 4 122855895 122863788 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098267.1 MGP_WSBEiJ_G0036930.1 mouse_genomes_project 4 92951609 92951716 + Gm24796 snRNA snRNA MGP_WSBEiJ_T0004528.1 MGP_WSBEiJ_G0003927.1 mouse_genomes_project 4 156566874 156571759 + Trp73os antisense antisense MGP_WSBEiJ_T0067508.1 MGP_WSBEiJ_G0028171.1 mouse_genomes_project 4 137391519 137397161 + MGP_WSBEiJ_P0067508 Zfp46 protein_coding protein_coding MGP_WSBEiJ_T0067509.1 MGP_WSBEiJ_G0028171.1 mouse_genomes_project 4 137391611 137396918 + MGP_WSBEiJ_P0067509 Zfp46 protein_coding protein_coding MGP_WSBEiJ_T0067510.1 MGP_WSBEiJ_G0028171.1 mouse_genomes_project 4 137391905 137393310 + Zfp46 protein_coding processed_transcript MGP_WSBEiJ_T0067511.1 MGP_WSBEiJ_G0028171.1 mouse_genomes_project 4 137392901 137400792 + MGP_WSBEiJ_P0067511 Zfp46 protein_coding protein_coding MGP_WSBEiJ_T0067512.1 MGP_WSBEiJ_G0028171.1 mouse_genomes_project 4 137392938 137397082 + MGP_WSBEiJ_P0067512 Zfp46 protein_coding protein_coding MGP_WSBEiJ_T0098313.1 MGP_WSBEiJ_G0036976.1 mouse_genomes_project 4 150601092 150601196 + Gm24002 snRNA snRNA MGP_WSBEiJ_T0099561.1 MGP_WSBEiJ_G0038224.1 mouse_genomes_project 4 127330994 127331124 - Gm24161 snoRNA snoRNA MGP_WSBEiJ_T0004526.1 MGP_WSBEiJ_G0003925.1 mouse_genomes_project 4 154775410 154775873 + Gm16333 antisense antisense MGP_WSBEiJ_T0066931.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130726206 130767869 + MGP_WSBEiJ_P0066931 Adgrb2 protein_coding protein_coding MGP_WSBEiJ_T0066932.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130726489 130767869 + MGP_WSBEiJ_P0066932 Adgrb2 protein_coding protein_coding MGP_WSBEiJ_T0066933.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130726593 130767869 + MGP_WSBEiJ_P0066933 Adgrb2 protein_coding protein_coding MGP_WSBEiJ_T0066934.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130733378 130767869 + MGP_WSBEiJ_P0066934 Adgrb2 protein_coding protein_coding MGP_WSBEiJ_T0066935.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130733379 130767575 + MGP_WSBEiJ_P0066935 Adgrb2 protein_coding protein_coding MGP_WSBEiJ_T0066936.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130733379 130767575 + MGP_WSBEiJ_P0066936 Adgrb2 protein_coding protein_coding MGP_WSBEiJ_T0066937.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130733379 130767575 + MGP_WSBEiJ_P0066937 Adgrb2 protein_coding protein_coding MGP_WSBEiJ_T0066938.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130752324 130757077 + Adgrb2 protein_coding retained_intron MGP_WSBEiJ_T0066939.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130752517 130757757 + Adgrb2 protein_coding retained_intron MGP_WSBEiJ_T0066940.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130757411 130757788 + Adgrb2 protein_coding retained_intron MGP_WSBEiJ_T0066941.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130758856 130759799 + Adgrb2 protein_coding retained_intron MGP_WSBEiJ_T0066942.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130764013 130766800 + Adgrb2 protein_coding retained_intron MGP_WSBEiJ_T0066943.1 MGP_WSBEiJ_G0028050.1 mouse_genomes_project 4 130766351 130767667 + Adgrb2 protein_coding retained_intron MGP_WSBEiJ_T0064258.1 MGP_WSBEiJ_G0027433.1 mouse_genomes_project 4 41235140 41245254 + MGP_WSBEiJ_P0064258 Rgp1 protein_coding protein_coding MGP_WSBEiJ_T0064259.1 MGP_WSBEiJ_G0027433.1 mouse_genomes_project 4 41235160 41245252 + MGP_WSBEiJ_P0064259 Rgp1 protein_coding protein_coding MGP_WSBEiJ_T0064260.1 MGP_WSBEiJ_G0027433.1 mouse_genomes_project 4 41235379 41237345 + Rgp1 protein_coding processed_transcript MGP_WSBEiJ_T0064261.1 MGP_WSBEiJ_G0027433.1 mouse_genomes_project 4 41235383 41239552 + MGP_WSBEiJ_P0064261 Rgp1 protein_coding protein_coding MGP_WSBEiJ_T0064262.1 MGP_WSBEiJ_G0027433.1 mouse_genomes_project 4 41235408 41236048 + Rgp1 protein_coding retained_intron MGP_WSBEiJ_T0064263.1 MGP_WSBEiJ_G0027433.1 mouse_genomes_project 4 41236162 41237341 + Rgp1 protein_coding retained_intron MGP_WSBEiJ_T0064264.1 MGP_WSBEiJ_G0027433.1 mouse_genomes_project 4 41237635 41238142 + Rgp1 protein_coding retained_intron MGP_WSBEiJ_T0099527.1 MGP_WSBEiJ_G0038190.1 mouse_genomes_project 4 55148971 55149103 - Gm25053 snoRNA snoRNA MGP_WSBEiJ_T0099545.1 MGP_WSBEiJ_G0038208.1 mouse_genomes_project 4 93844577 93844678 + Gm22804 snoRNA snoRNA MGP_WSBEiJ_T0014020.1 MGP_WSBEiJ_G0012150.1 mouse_genomes_project 4 11913751 11914078 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063588.1 MGP_WSBEiJ_G0027282.1 mouse_genomes_project 4 7876542 7932993 - MGP_WSBEiJ_P0063588 Ints8 protein_coding protein_coding MGP_WSBEiJ_T0063589.1 MGP_WSBEiJ_G0027282.1 mouse_genomes_project 4 7881477 7890158 - Ints8 protein_coding processed_transcript MGP_WSBEiJ_T0063590.1 MGP_WSBEiJ_G0027282.1 mouse_genomes_project 4 7881748 7912748 - Ints8 protein_coding processed_transcript MGP_WSBEiJ_T0063591.1 MGP_WSBEiJ_G0027282.1 mouse_genomes_project 4 7881750 7932993 - MGP_WSBEiJ_P0063591 Ints8 protein_coding protein_coding MGP_WSBEiJ_T0063592.1 MGP_WSBEiJ_G0027282.1 mouse_genomes_project 4 7881750 7932993 - MGP_WSBEiJ_P0063592 Ints8 protein_coding protein_coding MGP_WSBEiJ_T0063593.1 MGP_WSBEiJ_G0027282.1 mouse_genomes_project 4 7881751 7890725 - Ints8 protein_coding processed_transcript MGP_WSBEiJ_T0063594.1 MGP_WSBEiJ_G0027282.1 mouse_genomes_project 4 7886117 7896877 - Ints8 protein_coding processed_transcript MGP_WSBEiJ_T0063595.1 MGP_WSBEiJ_G0027282.1 mouse_genomes_project 4 7909759 7913153 - Ints8 protein_coding processed_transcript MGP_WSBEiJ_T0067893.1 MGP_WSBEiJ_G0028263.1 mouse_genomes_project 4 143273925 143275674 - MGP_WSBEiJ_P0067893 protein_coding protein_coding MGP_WSBEiJ_T0007839.1 MGP_WSBEiJ_G0006408.1 mouse_genomes_project 4 129681275 129689297 - 1700086P04Rik lincRNA lincRNA MGP_WSBEiJ_T0065784.1 MGP_WSBEiJ_G0027784.1 mouse_genomes_project 4 109326837 109353444 - MGP_WSBEiJ_P0065784 Rnf11 protein_coding protein_coding MGP_WSBEiJ_T0065785.1 MGP_WSBEiJ_G0027784.1 mouse_genomes_project 4 109328638 109353751 - MGP_WSBEiJ_P0065785 Rnf11 protein_coding protein_coding MGP_WSBEiJ_T0065786.1 MGP_WSBEiJ_G0027784.1 mouse_genomes_project 4 109330024 109361488 - MGP_WSBEiJ_P0065786 Rnf11 protein_coding protein_coding MGP_WSBEiJ_T0063705.1 MGP_WSBEiJ_G0027318.1 mouse_genomes_project 4 16897381 16923496 + MGP_WSBEiJ_P0063705 Ggh protein_coding protein_coding MGP_WSBEiJ_T0014400.1 MGP_WSBEiJ_G0012530.1 mouse_genomes_project 4 151949035 151949176 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064955.1 MGP_WSBEiJ_G0027606.1 mouse_genomes_project 4 78951036 78951549 - MGP_WSBEiJ_P0064955 mt-Nd6 protein_coding protein_coding MGP_WSBEiJ_T0014061.1 MGP_WSBEiJ_G0012191.1 mouse_genomes_project 4 24072637 24072885 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063777.1 MGP_WSBEiJ_G0027332.1 mouse_genomes_project 4 21829009 21871756 + Gpr63 protein_coding processed_transcript MGP_WSBEiJ_T0063778.1 MGP_WSBEiJ_G0027332.1 mouse_genomes_project 4 21836035 21873690 + MGP_WSBEiJ_P0063778 Gpr63 protein_coding protein_coding MGP_WSBEiJ_T0014213.1 MGP_WSBEiJ_G0012343.1 mouse_genomes_project 4 82142189 82142390 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067852.1 MGP_WSBEiJ_G0028255.1 mouse_genomes_project 4 143005477 143009655 - MGP_WSBEiJ_P0067852 Gm694 protein_coding protein_coding MGP_WSBEiJ_T0065370.1 MGP_WSBEiJ_G0027707.1 mouse_genomes_project 4 101275651 101366415 + MGP_WSBEiJ_P0065370 Lepr protein_coding protein_coding MGP_WSBEiJ_T0065371.1 MGP_WSBEiJ_G0027707.1 mouse_genomes_project 4 101275651 101449429 + MGP_WSBEiJ_P0065371 Lepr protein_coding protein_coding MGP_WSBEiJ_T0065372.1 MGP_WSBEiJ_G0027707.1 mouse_genomes_project 4 101275651 101349332 + MGP_WSBEiJ_P0065372 Lepr protein_coding protein_coding MGP_WSBEiJ_T0065373.1 MGP_WSBEiJ_G0027707.1 mouse_genomes_project 4 101275654 101295975 + MGP_WSBEiJ_P0065373 Lepr protein_coding protein_coding MGP_WSBEiJ_T0065374.1 MGP_WSBEiJ_G0027707.1 mouse_genomes_project 4 101327540 101338762 + Lepr protein_coding processed_transcript MGP_WSBEiJ_T0065375.1 MGP_WSBEiJ_G0027707.1 mouse_genomes_project 4 101329899 101342063 + Lepr protein_coding processed_transcript MGP_WSBEiJ_T0065376.1 MGP_WSBEiJ_G0027707.1 mouse_genomes_project 4 101346335 101349230 + Lepr protein_coding processed_transcript MGP_WSBEiJ_T0063868.1 MGP_WSBEiJ_G0027355.1 mouse_genomes_project 4 31803659 31820162 + MGP_WSBEiJ_P0063868 Akirin2 protein_coding protein_coding MGP_WSBEiJ_T0063869.1 MGP_WSBEiJ_G0027355.1 mouse_genomes_project 4 31803673 31816023 + Akirin2 protein_coding processed_transcript MGP_WSBEiJ_T0097388.1 MGP_WSBEiJ_G0036062.1 mouse_genomes_project 4 29398589 29413807 + Bach2it1 sense_intronic sense_intronic MGP_WSBEiJ_T0065174.1 MGP_WSBEiJ_G0027661.1 mouse_genomes_project 4 93917743 93918276 + MGP_WSBEiJ_P0065174 Gm10306 protein_coding protein_coding MGP_WSBEiJ_T0064853.1 MGP_WSBEiJ_G0027581.1 mouse_genomes_project 4 61900066 61902024 + MGP_WSBEiJ_P0064853 Orm2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0014278.1 MGP_WSBEiJ_G0012408.1 mouse_genomes_project 4 105982908 105983175 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011387.1 MGP_WSBEiJ_G0009544.1 mouse_genomes_project 4 154544955 154545279 - Gm27500 misc_RNA misc_RNA MGP_WSBEiJ_T0011371.1 MGP_WSBEiJ_G0009528.1 mouse_genomes_project 4 77577835 77577921 + Gm22262 misc_RNA misc_RNA MGP_WSBEiJ_T0004525.1 MGP_WSBEiJ_G0003924.1 mouse_genomes_project 4 153638497 153641610 + 4930589P08Rik antisense antisense MGP_WSBEiJ_T0067894.1 MGP_WSBEiJ_G0028264.1 mouse_genomes_project 4 143340060 143353985 + MGP_WSBEiJ_P0067894 Agmat protein_coding protein_coding MGP_WSBEiJ_T0066449.1 MGP_WSBEiJ_G0027938.1 mouse_genomes_project 4 123175796 123190105 - Mfsd2a protein_coding processed_transcript MGP_WSBEiJ_T0066450.1 MGP_WSBEiJ_G0027938.1 mouse_genomes_project 4 123175796 123190141 - MGP_WSBEiJ_P0066450 Mfsd2a protein_coding protein_coding MGP_WSBEiJ_T0066451.1 MGP_WSBEiJ_G0027938.1 mouse_genomes_project 4 123185693 123188939 - Mfsd2a protein_coding processed_transcript MGP_WSBEiJ_T0066452.1 MGP_WSBEiJ_G0027938.1 mouse_genomes_project 4 123185720 123190141 - MGP_WSBEiJ_P0066452 Mfsd2a protein_coding protein_coding MGP_WSBEiJ_T0063526.1 MGP_WSBEiJ_G0027273.1 mouse_genomes_project 4 5297956 5379418 + Chd7 protein_coding retained_intron MGP_WSBEiJ_T0063527.1 MGP_WSBEiJ_G0027273.1 mouse_genomes_project 4 5298020 5411440 + MGP_WSBEiJ_P0063527 Chd7 protein_coding protein_coding MGP_WSBEiJ_T0063528.1 MGP_WSBEiJ_G0027273.1 mouse_genomes_project 4 5307980 5496696 + MGP_WSBEiJ_P0063528 Chd7 protein_coding protein_coding MGP_WSBEiJ_T0063529.1 MGP_WSBEiJ_G0027273.1 mouse_genomes_project 4 5308424 5497544 + MGP_WSBEiJ_P0063529 Chd7 protein_coding protein_coding MGP_WSBEiJ_T0063530.1 MGP_WSBEiJ_G0027273.1 mouse_genomes_project 4 5327783 5375080 + MGP_WSBEiJ_P0063530 Chd7 protein_coding protein_coding MGP_WSBEiJ_T0063531.1 MGP_WSBEiJ_G0027273.1 mouse_genomes_project 4 5374955 5497110 + MGP_WSBEiJ_P0063531 Chd7 protein_coding protein_coding MGP_WSBEiJ_T0063532.1 MGP_WSBEiJ_G0027273.1 mouse_genomes_project 4 5375022 5498628 + MGP_WSBEiJ_P0063532 Chd7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0063533.1 MGP_WSBEiJ_G0027273.1 mouse_genomes_project 4 5468721 5474608 + Chd7 protein_coding processed_transcript MGP_WSBEiJ_T0017456.1 MGP_WSBEiJ_G0014967.1 mouse_genomes_project 4 44400268 44404156 + Gm16731 processed_transcript processed_transcript MGP_WSBEiJ_T0098236.1 MGP_WSBEiJ_G0036899.1 mouse_genomes_project 4 13669770 13669876 - Gm23975 snRNA snRNA MGP_WSBEiJ_T0014140.1 MGP_WSBEiJ_G0012270.1 mouse_genomes_project 4 51939983 51940370 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067480.1 MGP_WSBEiJ_G0028164.1 mouse_genomes_project 4 137052070 137064511 - MGP_WSBEiJ_P0067480 Pithd1 protein_coding protein_coding MGP_WSBEiJ_T0067481.1 MGP_WSBEiJ_G0028164.1 mouse_genomes_project 4 137052676 137063183 - Pithd1 protein_coding processed_transcript MGP_WSBEiJ_T0067482.1 MGP_WSBEiJ_G0028164.1 mouse_genomes_project 4 137053004 137055444 - Pithd1 protein_coding retained_intron MGP_WSBEiJ_T0067483.1 MGP_WSBEiJ_G0028164.1 mouse_genomes_project 4 137053006 137063569 - MGP_WSBEiJ_P0067483 Pithd1 protein_coding protein_coding MGP_WSBEiJ_T0067484.1 MGP_WSBEiJ_G0028164.1 mouse_genomes_project 4 137053817 137064164 - MGP_WSBEiJ_P0067484 Pithd1 protein_coding protein_coding MGP_WSBEiJ_T0067485.1 MGP_WSBEiJ_G0028164.1 mouse_genomes_project 4 137054871 137064328 - Pithd1 protein_coding retained_intron MGP_WSBEiJ_T0067486.1 MGP_WSBEiJ_G0028164.1 mouse_genomes_project 4 137063660 137064334 - Pithd1 protein_coding processed_transcript MGP_WSBEiJ_T0010472.1 MGP_WSBEiJ_G0008629.1 mouse_genomes_project 4 139622296 139622406 - Gm27646 miRNA miRNA MGP_WSBEiJ_T0065245.1 MGP_WSBEiJ_G0027680.1 mouse_genomes_project 4 96539187 96540677 - MGP_WSBEiJ_P0065245 protein_coding protein_coding MGP_WSBEiJ_T0064789.1 MGP_WSBEiJ_G0027566.1 mouse_genomes_project 4 60893333 60911541 + MGP_WSBEiJ_P0064789 Prpf4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064790.1 MGP_WSBEiJ_G0027566.1 mouse_genomes_project 4 60893341 60911536 + MGP_WSBEiJ_P0064790 Prpf4 protein_coding protein_coding MGP_WSBEiJ_T0064791.1 MGP_WSBEiJ_G0027566.1 mouse_genomes_project 4 60906389 60907877 + Prpf4 protein_coding processed_transcript MGP_WSBEiJ_T0065952.1 MGP_WSBEiJ_G0027825.1 mouse_genomes_project 4 115899490 115910904 - Uqcrh protein_coding processed_transcript MGP_WSBEiJ_T0065953.1 MGP_WSBEiJ_G0027825.1 mouse_genomes_project 4 115899490 115910941 - MGP_WSBEiJ_P0065953 Uqcrh protein_coding protein_coding MGP_WSBEiJ_T0065954.1 MGP_WSBEiJ_G0027825.1 mouse_genomes_project 4 115899490 115910901 - MGP_WSBEiJ_P0065954 Uqcrh protein_coding protein_coding MGP_WSBEiJ_T0065955.1 MGP_WSBEiJ_G0027825.1 mouse_genomes_project 4 115899491 115906024 - Uqcrh protein_coding retained_intron MGP_WSBEiJ_T0065956.1 MGP_WSBEiJ_G0027825.1 mouse_genomes_project 4 115906046 115910929 - Uqcrh protein_coding retained_intron MGP_WSBEiJ_T0067728.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140751579 140874949 + MGP_WSBEiJ_P0067728 Ubr4 protein_coding protein_coding MGP_WSBEiJ_T0067730.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140783981 140895686 + MGP_WSBEiJ_P0067730 Ubr4 protein_coding protein_coding MGP_WSBEiJ_T0067731.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140783981 140895744 + MGP_WSBEiJ_P0067731 Ubr4 protein_coding protein_coding MGP_WSBEiJ_T0067732.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140783991 140800991 + Ubr4 protein_coding processed_transcript MGP_WSBEiJ_T0067733.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140817846 140857187 + MGP_WSBEiJ_P0067733 Ubr4 protein_coding protein_coding MGP_WSBEiJ_T0067734.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140819601 140820416 + Ubr4 protein_coding retained_intron MGP_WSBEiJ_T0067735.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140840257 140843413 + MGP_WSBEiJ_P0067735 Ubr4 protein_coding protein_coding MGP_WSBEiJ_T0067736.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140868456 140869173 + Ubr4 protein_coding retained_intron MGP_WSBEiJ_T0067737.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140882280 140887016 + Ubr4 protein_coding retained_intron MGP_WSBEiJ_T0067738.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140885149 140888812 + Ubr4 protein_coding processed_transcript MGP_WSBEiJ_T0067739.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140885332 140887260 + Ubr4 protein_coding retained_intron MGP_WSBEiJ_T0067740.1 MGP_WSBEiJ_G0028225.1 mouse_genomes_project 4 140886585 140888894 + Ubr4 protein_coding retained_intron MGP_WSBEiJ_T0010453.1 MGP_WSBEiJ_G0008610.1 mouse_genomes_project 4 129946139 129946221 - Gm22994 miRNA miRNA MGP_WSBEiJ_T0004457.1 MGP_WSBEiJ_G0003872.1 mouse_genomes_project 4 126595447 126597197 + Gm12946 antisense antisense MGP_WSBEiJ_T0014333.1 MGP_WSBEiJ_G0012463.1 mouse_genomes_project 4 122812201 122813240 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064266.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41296415 41315802 + MGP_WSBEiJ_P0064266 Npr2 protein_coding protein_coding MGP_WSBEiJ_T0064267.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41296665 41315802 + MGP_WSBEiJ_P0064267 Npr2 protein_coding protein_coding MGP_WSBEiJ_T0064268.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41305670 41315802 + Npr2 protein_coding processed_transcript MGP_WSBEiJ_T0064269.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41305809 41307651 + Npr2 protein_coding processed_transcript MGP_WSBEiJ_T0064270.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41305816 41308932 + MGP_WSBEiJ_P0064270 Npr2 protein_coding protein_coding MGP_WSBEiJ_T0064271.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41305838 41315802 + MGP_WSBEiJ_P0064271 Npr2 protein_coding protein_coding MGP_WSBEiJ_T0064272.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41308688 41312731 + Npr2 protein_coding processed_transcript MGP_WSBEiJ_T0064273.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41311112 41314867 + Npr2 protein_coding processed_transcript MGP_WSBEiJ_T0064274.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41311749 41312958 + Npr2 protein_coding processed_transcript MGP_WSBEiJ_T0064275.1 MGP_WSBEiJ_G0027435.1 mouse_genomes_project 4 41312557 41314788 + Npr2 protein_coding processed_transcript MGP_WSBEiJ_T0066993.1 MGP_WSBEiJ_G0028062.1 mouse_genomes_project 4 131282458 131408295 + MGP_WSBEiJ_P0066993 Pum1 protein_coding protein_coding MGP_WSBEiJ_T0066994.1 MGP_WSBEiJ_G0028062.1 mouse_genomes_project 4 131282496 131408293 + MGP_WSBEiJ_P0066994 Pum1 protein_coding protein_coding MGP_WSBEiJ_T0066995.1 MGP_WSBEiJ_G0028062.1 mouse_genomes_project 4 131282496 131408293 + MGP_WSBEiJ_P0066995 Pum1 protein_coding protein_coding MGP_WSBEiJ_T0066996.1 MGP_WSBEiJ_G0028062.1 mouse_genomes_project 4 131282503 131340436 + Pum1 protein_coding retained_intron MGP_WSBEiJ_T0066997.1 MGP_WSBEiJ_G0028062.1 mouse_genomes_project 4 131282504 131369692 + MGP_WSBEiJ_P0066997 Pum1 protein_coding protein_coding MGP_WSBEiJ_T0066998.1 MGP_WSBEiJ_G0028062.1 mouse_genomes_project 4 131282523 131406999 + MGP_WSBEiJ_P0066998 Pum1 protein_coding protein_coding MGP_WSBEiJ_T0066999.1 MGP_WSBEiJ_G0028062.1 mouse_genomes_project 4 131282543 131406987 + MGP_WSBEiJ_P0066999 Pum1 protein_coding protein_coding MGP_WSBEiJ_T0001378.1 MGP_WSBEiJ_G0001307.1 mouse_genomes_project 4 98864659 98874293 - TEC TEC MGP_WSBEiJ_T0007892.1 MGP_WSBEiJ_G0006449.1 mouse_genomes_project 4 150347858 150357454 + Gm13206 lincRNA lincRNA MGP_WSBEiJ_T0068034.1 MGP_WSBEiJ_G0028314.1 mouse_genomes_project 4 150167555 150176557 - MGP_WSBEiJ_P0068034 Fbxo6 protein_coding protein_coding MGP_WSBEiJ_T0068035.1 MGP_WSBEiJ_G0028314.1 mouse_genomes_project 4 150167555 150176294 - MGP_WSBEiJ_P0068035 Fbxo6 protein_coding protein_coding MGP_WSBEiJ_T0068036.1 MGP_WSBEiJ_G0028314.1 mouse_genomes_project 4 150167626 150176299 - MGP_WSBEiJ_P0068036 Fbxo6 protein_coding protein_coding MGP_WSBEiJ_T0068037.1 MGP_WSBEiJ_G0028314.1 mouse_genomes_project 4 150167627 150176481 - MGP_WSBEiJ_P0068037 Fbxo6 protein_coding protein_coding MGP_WSBEiJ_T0068038.1 MGP_WSBEiJ_G0028314.1 mouse_genomes_project 4 150167848 150176562 - MGP_WSBEiJ_P0068038 Fbxo6 protein_coding protein_coding MGP_WSBEiJ_T0068039.1 MGP_WSBEiJ_G0028314.1 mouse_genomes_project 4 150167931 150171604 - MGP_WSBEiJ_P0068039 Fbxo6 protein_coding protein_coding MGP_WSBEiJ_T0068040.1 MGP_WSBEiJ_G0028314.1 mouse_genomes_project 4 150167957 150176311 - MGP_WSBEiJ_P0068040 Fbxo6 protein_coding protein_coding MGP_WSBEiJ_T0068041.1 MGP_WSBEiJ_G0028314.1 mouse_genomes_project 4 150171328 150176032 - MGP_WSBEiJ_P0068041 Fbxo6 protein_coding protein_coding MGP_WSBEiJ_T0065675.1 MGP_WSBEiJ_G0027765.1 mouse_genomes_project 4 108162155 108175386 + MGP_WSBEiJ_P0065675 Coa7 protein_coding protein_coding MGP_WSBEiJ_T0065676.1 MGP_WSBEiJ_G0027765.1 mouse_genomes_project 4 108162168 108172290 + Coa7 protein_coding processed_transcript MGP_WSBEiJ_T0065677.1 MGP_WSBEiJ_G0027765.1 mouse_genomes_project 4 108162171 108172522 + Coa7 protein_coding processed_transcript MGP_WSBEiJ_T0065678.1 MGP_WSBEiJ_G0027765.1 mouse_genomes_project 4 108162193 108172017 + Coa7 protein_coding processed_transcript MGP_WSBEiJ_T0065679.1 MGP_WSBEiJ_G0027765.1 mouse_genomes_project 4 108162204 108166645 + Coa7 protein_coding processed_transcript MGP_WSBEiJ_T0068521.1 MGP_WSBEiJ_G0028401.1 mouse_genomes_project 4 157591148 157596566 + MGP_WSBEiJ_P0068521 Pex10 protein_coding protein_coding MGP_WSBEiJ_T0068522.1 MGP_WSBEiJ_G0028401.1 mouse_genomes_project 4 157591186 157593014 + Pex10 protein_coding processed_transcript MGP_WSBEiJ_T0068523.1 MGP_WSBEiJ_G0028401.1 mouse_genomes_project 4 157591189 157596314 + Pex10 protein_coding processed_transcript MGP_WSBEiJ_T0068524.1 MGP_WSBEiJ_G0028401.1 mouse_genomes_project 4 157591191 157592156 + Pex10 protein_coding processed_transcript MGP_WSBEiJ_T0068525.1 MGP_WSBEiJ_G0028401.1 mouse_genomes_project 4 157591191 157593249 + Pex10 protein_coding processed_transcript MGP_WSBEiJ_T0014331.1 MGP_WSBEiJ_G0012461.1 mouse_genomes_project 4 121550003 121550328 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011356.1 MGP_WSBEiJ_G0009513.1 mouse_genomes_project 4 15560043 15560329 + Gm25971 misc_RNA misc_RNA MGP_WSBEiJ_T0067957.1 MGP_WSBEiJ_G0028288.1 mouse_genomes_project 4 146246325 146246634 - MGP_WSBEiJ_P0067957 Gm9944 protein_coding protein_coding MGP_WSBEiJ_T0064856.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61958528 62043166 - MGP_WSBEiJ_P0064856 Whrn protein_coding protein_coding MGP_WSBEiJ_T0064857.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61958533 62041540 - Whrn protein_coding processed_transcript MGP_WSBEiJ_T0064858.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61958533 61976948 - Whrn protein_coding retained_intron MGP_WSBEiJ_T0064859.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61958533 61976948 - Whrn protein_coding retained_intron MGP_WSBEiJ_T0064860.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61958533 62043884 - MGP_WSBEiJ_P0064860 Whrn protein_coding protein_coding MGP_WSBEiJ_T0064861.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61958533 62043884 - MGP_WSBEiJ_P0064861 Whrn protein_coding protein_coding MGP_WSBEiJ_T0064862.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61958533 62043884 - MGP_WSBEiJ_P0064862 Whrn protein_coding protein_coding MGP_WSBEiJ_T0064863.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61958533 62043884 - MGP_WSBEiJ_P0064863 Whrn protein_coding protein_coding MGP_WSBEiJ_T0064864.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61963092 61975555 - MGP_WSBEiJ_P0064864 Whrn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064865.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61969337 61975628 - Whrn protein_coding processed_transcript MGP_WSBEiJ_T0064866.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61975058 62043924 - MGP_WSBEiJ_P0064866 Whrn protein_coding protein_coding MGP_WSBEiJ_T0064867.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61978426 62008079 - Whrn protein_coding retained_intron MGP_WSBEiJ_T0064868.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 61979854 62020684 - MGP_WSBEiJ_P0064868 Whrn protein_coding protein_coding MGP_WSBEiJ_T0064869.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 62006933 62042692 - MGP_WSBEiJ_P0064869 Whrn protein_coding protein_coding MGP_WSBEiJ_T0064870.1 MGP_WSBEiJ_G0027583.1 mouse_genomes_project 4 62007596 62042610 - Whrn protein_coding retained_intron MGP_WSBEiJ_T0099524.1 MGP_WSBEiJ_G0038187.1 mouse_genomes_project 4 54917275 54917407 - Gm26144 snoRNA snoRNA MGP_WSBEiJ_T0066265.1 MGP_WSBEiJ_G0027887.1 mouse_genomes_project 4 118726730 118727679 + MGP_WSBEiJ_P0066265 protein_coding protein_coding MGP_WSBEiJ_T0064562.1 MGP_WSBEiJ_G0027502.1 mouse_genomes_project 4 47606246 47621681 - MGP_WSBEiJ_P0064562 Tmem246 protein_coding protein_coding MGP_WSBEiJ_T0064563.1 MGP_WSBEiJ_G0027502.1 mouse_genomes_project 4 47608506 47621275 - MGP_WSBEiJ_P0064563 Tmem246 protein_coding protein_coding MGP_WSBEiJ_T0064564.1 MGP_WSBEiJ_G0027502.1 mouse_genomes_project 4 47608792 47617031 - MGP_WSBEiJ_P0064564 Tmem246 protein_coding protein_coding MGP_WSBEiJ_T0014273.1 MGP_WSBEiJ_G0012403.1 mouse_genomes_project 4 104645643 104645911 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063701.1 MGP_WSBEiJ_G0027316.1 mouse_genomes_project 4 16725423 16773842 - MGP_WSBEiJ_P0063701 Atp6v0d2 protein_coding protein_coding MGP_WSBEiJ_T0063702.1 MGP_WSBEiJ_G0027316.1 mouse_genomes_project 4 16739437 16768081 - MGP_WSBEiJ_P0063702 Atp6v0d2 protein_coding protein_coding MGP_WSBEiJ_T0014253.1 MGP_WSBEiJ_G0012383.1 mouse_genomes_project 4 97762630 97762942 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097398.1 MGP_WSBEiJ_G0036072.1 mouse_genomes_project 4 154547058 154547513 + Gm13096 sense_intronic sense_intronic MGP_WSBEiJ_T0065239.1 MGP_WSBEiJ_G0027675.1 mouse_genomes_project 4 95803577 95863209 - MGP_WSBEiJ_P0065239 Cyp2j8 protein_coding protein_coding MGP_WSBEiJ_T0011367.1 MGP_WSBEiJ_G0009524.1 mouse_genomes_project 4 51866522 51866821 - Gm25445 misc_RNA misc_RNA MGP_WSBEiJ_T0100087.1 MGP_WSBEiJ_G0038696.1 mouse_genomes_project 4 6569254 6570687 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100088.1 MGP_WSBEiJ_G0038696.1 mouse_genomes_project 4 6569927 6570925 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0011383.1 MGP_WSBEiJ_G0009540.1 mouse_genomes_project 4 123769324 123769430 + Gm23548 misc_RNA misc_RNA MGP_WSBEiJ_T0007689.1 MGP_WSBEiJ_G0006287.1 mouse_genomes_project 4 10981145 10993304 - 1700120G11Rik lincRNA lincRNA MGP_WSBEiJ_T0066857.1 MGP_WSBEiJ_G0028038.1 mouse_genomes_project 4 130270403 130271046 - Fam167b protein_coding processed_transcript MGP_WSBEiJ_T0066858.1 MGP_WSBEiJ_G0028038.1 mouse_genomes_project 4 130270403 130272138 - MGP_WSBEiJ_P0066858 Fam167b protein_coding protein_coding MGP_WSBEiJ_T0007676.1 MGP_WSBEiJ_G0006278.1 mouse_genomes_project 4 5932721 5935313 - Gm26548 lincRNA lincRNA MGP_WSBEiJ_T0068502.1 MGP_WSBEiJ_G0028399.1 mouse_genomes_project 4 157484418 157501062 + MGP_WSBEiJ_P0068502 Pank4 protein_coding protein_coding MGP_WSBEiJ_T0068503.1 MGP_WSBEiJ_G0028399.1 mouse_genomes_project 4 157484428 157501129 + MGP_WSBEiJ_P0068503 Pank4 protein_coding protein_coding MGP_WSBEiJ_T0068504.1 MGP_WSBEiJ_G0028399.1 mouse_genomes_project 4 157490216 157501080 + MGP_WSBEiJ_P0068504 Pank4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068505.1 MGP_WSBEiJ_G0028399.1 mouse_genomes_project 4 157494750 157501129 + Pank4 protein_coding retained_intron MGP_WSBEiJ_T0068506.1 MGP_WSBEiJ_G0028399.1 mouse_genomes_project 4 157496476 157499360 + Pank4 protein_coding retained_intron MGP_WSBEiJ_T0068507.1 MGP_WSBEiJ_G0028399.1 mouse_genomes_project 4 157496484 157499430 + Pank4 protein_coding retained_intron MGP_WSBEiJ_T0068508.1 MGP_WSBEiJ_G0028399.1 mouse_genomes_project 4 157496783 157501125 + Pank4 protein_coding retained_intron MGP_WSBEiJ_T0065873.1 MGP_WSBEiJ_G0027804.1 mouse_genomes_project 4 114684093 114727610 + MGP_WSBEiJ_P0065873 Stil protein_coding protein_coding MGP_WSBEiJ_T0065874.1 MGP_WSBEiJ_G0027804.1 mouse_genomes_project 4 114684116 114723804 + MGP_WSBEiJ_P0065874 Stil protein_coding protein_coding MGP_WSBEiJ_T0065875.1 MGP_WSBEiJ_G0027804.1 mouse_genomes_project 4 114684116 114727610 + MGP_WSBEiJ_P0065875 Stil protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065876.1 MGP_WSBEiJ_G0027804.1 mouse_genomes_project 4 114690691 114700193 + MGP_WSBEiJ_P0065876 Stil protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065877.1 MGP_WSBEiJ_G0027804.1 mouse_genomes_project 4 114694057 114705846 + Stil protein_coding processed_transcript MGP_WSBEiJ_T0065878.1 MGP_WSBEiJ_G0027804.1 mouse_genomes_project 4 114700127 114707409 + Stil protein_coding retained_intron MGP_WSBEiJ_T0064184.1 MGP_WSBEiJ_G0027422.1 mouse_genomes_project 4 41074409 41076522 - MGP_WSBEiJ_P0064184 Fam166b protein_coding protein_coding MGP_WSBEiJ_T0064185.1 MGP_WSBEiJ_G0027422.1 mouse_genomes_project 4 41074466 41076505 - MGP_WSBEiJ_P0064185 Fam166b protein_coding protein_coding MGP_WSBEiJ_T0064186.1 MGP_WSBEiJ_G0027422.1 mouse_genomes_project 4 41074530 41075415 - MGP_WSBEiJ_P0064186 Fam166b protein_coding protein_coding MGP_WSBEiJ_T0064187.1 MGP_WSBEiJ_G0027422.1 mouse_genomes_project 4 41074530 41076477 - MGP_WSBEiJ_P0064187 Fam166b protein_coding protein_coding MGP_WSBEiJ_T0064188.1 MGP_WSBEiJ_G0027422.1 mouse_genomes_project 4 41074573 41076477 - MGP_WSBEiJ_P0064188 Fam166b protein_coding protein_coding MGP_WSBEiJ_T0064189.1 MGP_WSBEiJ_G0027422.1 mouse_genomes_project 4 41074978 41076477 - MGP_WSBEiJ_P0064189 Fam166b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014018.1 MGP_WSBEiJ_G0012148.1 mouse_genomes_project 4 11181756 11182197 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068578.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158064027 158138253 + MGP_WSBEiJ_P0068578 Gnb1 protein_coding protein_coding MGP_WSBEiJ_T0068579.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158064030 158138253 + MGP_WSBEiJ_P0068579 Gnb1 protein_coding protein_coding MGP_WSBEiJ_T0068580.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158064036 158138253 + MGP_WSBEiJ_P0068580 Gnb1 protein_coding protein_coding MGP_WSBEiJ_T0068581.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158065575 158120881 + MGP_WSBEiJ_P0068581 Gnb1 protein_coding protein_coding MGP_WSBEiJ_T0068582.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158100087 158134144 + MGP_WSBEiJ_P0068582 Gnb1 protein_coding protein_coding MGP_WSBEiJ_T0068583.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158100261 158119026 + Gnb1 protein_coding retained_intron MGP_WSBEiJ_T0068584.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158105245 158138251 + MGP_WSBEiJ_P0068584 Gnb1 protein_coding protein_coding MGP_WSBEiJ_T0068585.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158120721 158134213 + Gnb1 protein_coding retained_intron MGP_WSBEiJ_T0068586.1 MGP_WSBEiJ_G0028410.1 mouse_genomes_project 4 158132231 158136661 + Gnb1 protein_coding retained_intron MGP_WSBEiJ_T0065255.1 MGP_WSBEiJ_G0027682.1 mouse_genomes_project 4 97149375 97388837 + MGP_WSBEiJ_P0065255 Nfia protein_coding protein_coding MGP_WSBEiJ_T0065256.1 MGP_WSBEiJ_G0027682.1 mouse_genomes_project 4 97155186 97508941 + MGP_WSBEiJ_P0065256 Nfia protein_coding protein_coding MGP_WSBEiJ_T0065257.1 MGP_WSBEiJ_G0027682.1 mouse_genomes_project 4 97155204 97508944 + MGP_WSBEiJ_P0065257 Nfia protein_coding protein_coding MGP_WSBEiJ_T0065258.1 MGP_WSBEiJ_G0027682.1 mouse_genomes_project 4 97155381 97508941 + MGP_WSBEiJ_P0065258 Nfia protein_coding protein_coding MGP_WSBEiJ_T0065259.1 MGP_WSBEiJ_G0027682.1 mouse_genomes_project 4 97155397 97508941 + MGP_WSBEiJ_P0065259 Nfia protein_coding protein_coding MGP_WSBEiJ_T0065260.1 MGP_WSBEiJ_G0027682.1 mouse_genomes_project 4 97155412 97508941 + MGP_WSBEiJ_P0065260 Nfia protein_coding protein_coding MGP_WSBEiJ_T0065261.1 MGP_WSBEiJ_G0027682.1 mouse_genomes_project 4 97260817 97453623 + MGP_WSBEiJ_P0065261 Nfia protein_coding protein_coding MGP_WSBEiJ_T0065262.1 MGP_WSBEiJ_G0027682.1 mouse_genomes_project 4 97293783 97430357 + Nfia protein_coding processed_transcript MGP_WSBEiJ_T0099552.1 MGP_WSBEiJ_G0038215.1 mouse_genomes_project 4 117063749 117063853 - Gm26330 snoRNA snoRNA MGP_WSBEiJ_T0007742.1 MGP_WSBEiJ_G0006332.1 mouse_genomes_project 4 57006092 57016330 - Gm12580 lincRNA lincRNA MGP_WSBEiJ_T0067569.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138820728 138834128 + MGP_WSBEiJ_P0067569 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067570.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138821113 138891562 + MGP_WSBEiJ_P0067570 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067571.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138821180 138891562 + MGP_WSBEiJ_P0067571 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067572.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138821180 138857385 + MGP_WSBEiJ_P0067572 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067573.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138821201 138857385 + MGP_WSBEiJ_P0067573 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067574.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138850626 138857385 + MGP_WSBEiJ_P0067574 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067575.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138851866 138855473 + Usp48 protein_coding processed_transcript MGP_WSBEiJ_T0067576.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138853310 138865206 + Usp48 protein_coding processed_transcript MGP_WSBEiJ_T0067577.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138855473 138865640 + MGP_WSBEiJ_P0067577 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067578.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138857256 138891568 + Usp48 protein_coding processed_transcript MGP_WSBEiJ_T0067579.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138865379 138888294 + MGP_WSBEiJ_P0067579 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067580.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138865450 138870358 + MGP_WSBEiJ_P0067580 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067581.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138865854 138885989 + MGP_WSBEiJ_P0067581 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067582.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138877306 138888287 + MGP_WSBEiJ_P0067582 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067583.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138877391 138885823 + MGP_WSBEiJ_P0067583 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067584.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138883273 138889370 + MGP_WSBEiJ_P0067584 Usp48 protein_coding protein_coding MGP_WSBEiJ_T0067585.1 MGP_WSBEiJ_G0028192.1 mouse_genomes_project 4 138890428 138891561 + Usp48 protein_coding processed_transcript MGP_WSBEiJ_T0063649.1 MGP_WSBEiJ_G0027296.1 mouse_genomes_project 4 9661273 9728508 + MGP_WSBEiJ_P0063649 Triqk protein_coding protein_coding MGP_WSBEiJ_T0063650.1 MGP_WSBEiJ_G0027296.1 mouse_genomes_project 4 9661293 9731136 + MGP_WSBEiJ_P0063650 Triqk protein_coding protein_coding MGP_WSBEiJ_T0063651.1 MGP_WSBEiJ_G0027296.1 mouse_genomes_project 4 9672542 9728705 + Triqk protein_coding processed_transcript MGP_WSBEiJ_T0066164.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117816475 117822181 - MGP_WSBEiJ_P0066164 Ccdc24 protein_coding protein_coding MGP_WSBEiJ_T0066165.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117817607 117818925 - Ccdc24 protein_coding processed_transcript MGP_WSBEiJ_T0066166.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117818700 117821247 - Ccdc24 protein_coding retained_intron MGP_WSBEiJ_T0066168.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117819211 117822505 - MGP_WSBEiJ_P0066168 Ccdc24 protein_coding protein_coding MGP_WSBEiJ_T0066169.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117819460 117821053 - MGP_WSBEiJ_P0066169 Ccdc24 protein_coding protein_coding MGP_WSBEiJ_T0066170.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117819575 117822471 - MGP_WSBEiJ_P0066170 Ccdc24 protein_coding protein_coding MGP_WSBEiJ_T0066171.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117819716 117821281 - Ccdc24 protein_coding processed_transcript MGP_WSBEiJ_T0066172.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117820094 117822508 - MGP_WSBEiJ_P0066172 Ccdc24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066173.1 MGP_WSBEiJ_G0027865.1 mouse_genomes_project 4 117820491 117822471 - MGP_WSBEiJ_P0066173 Ccdc24 protein_coding protein_coding MGP_WSBEiJ_T0067954.1 MGP_WSBEiJ_G0028286.1 mouse_genomes_project 4 146182839 146200140 - MGP_WSBEiJ_P0067954 Pramef12 protein_coding protein_coding MGP_WSBEiJ_T0067955.1 MGP_WSBEiJ_G0028286.1 mouse_genomes_project 4 146186212 146200093 - MGP_WSBEiJ_P0067955 Pramef12 protein_coding protein_coding MGP_WSBEiJ_T0014280.1 MGP_WSBEiJ_G0012410.1 mouse_genomes_project 4 107050894 107051330 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100825.1 MGP_WSBEiJ_G0039283.1 mouse_genomes_project 4 95728534 95748844 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0066266.1 MGP_WSBEiJ_G0027888.1 mouse_genomes_project 4 118735032 118735980 + MGP_WSBEiJ_P0066266 Olfr1339 protein_coding protein_coding MGP_WSBEiJ_T0099497.1 MGP_WSBEiJ_G0038160.1 mouse_genomes_project 4 3252778 3252910 - Gm22473 snoRNA snoRNA MGP_WSBEiJ_T0099532.1 MGP_WSBEiJ_G0038195.1 mouse_genomes_project 4 65186737 65186870 + Gm25480 snoRNA snoRNA MGP_WSBEiJ_T0064085.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40554278 40577966 + Phf24 protein_coding processed_transcript MGP_WSBEiJ_T0064086.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40554299 40573975 + MGP_WSBEiJ_P0064086 Phf24 protein_coding protein_coding MGP_WSBEiJ_T0064087.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40554312 40584818 + MGP_WSBEiJ_P0064087 Phf24 protein_coding protein_coding MGP_WSBEiJ_T0064088.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40554869 40584818 + MGP_WSBEiJ_P0064088 Phf24 protein_coding protein_coding MGP_WSBEiJ_T0064089.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40554888 40584818 + MGP_WSBEiJ_P0064089 Phf24 protein_coding protein_coding MGP_WSBEiJ_T0064090.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40554952 40580423 + MGP_WSBEiJ_P0064090 Phf24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064091.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40561022 40573941 + MGP_WSBEiJ_P0064091 Phf24 protein_coding protein_coding MGP_WSBEiJ_T0064092.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40574062 40579579 + MGP_WSBEiJ_P0064092 Phf24 protein_coding protein_coding MGP_WSBEiJ_T0064093.1 MGP_WSBEiJ_G0027411.1 mouse_genomes_project 4 40578319 40579899 + MGP_WSBEiJ_P0064093 Phf24 protein_coding protein_coding MGP_WSBEiJ_T0063845.1 MGP_WSBEiJ_G0027347.1 mouse_genomes_project 4 30239684 30277824 + MGP_WSBEiJ_P0063845 Gabrr2 protein_coding protein_coding MGP_WSBEiJ_T0063846.1 MGP_WSBEiJ_G0027347.1 mouse_genomes_project 4 30239797 30277824 + MGP_WSBEiJ_P0063846 Gabrr2 protein_coding protein_coding MGP_WSBEiJ_T0063847.1 MGP_WSBEiJ_G0027347.1 mouse_genomes_project 4 30257068 30267554 + MGP_WSBEiJ_P0063847 Gabrr2 protein_coding protein_coding MGP_WSBEiJ_T0063848.1 MGP_WSBEiJ_G0027347.1 mouse_genomes_project 4 30259771 30267810 + MGP_WSBEiJ_P0063848 Gabrr2 protein_coding protein_coding MGP_WSBEiJ_T0066842.1 MGP_WSBEiJ_G0028035.1 mouse_genomes_project 4 130197618 130199366 + MGP_WSBEiJ_P0066842 Marcksl1 protein_coding protein_coding MGP_WSBEiJ_T0067468.1 MGP_WSBEiJ_G0028162.1 mouse_genomes_project 4 137040341 137044785 + MGP_WSBEiJ_P0067468 Gale protein_coding protein_coding MGP_WSBEiJ_T0067469.1 MGP_WSBEiJ_G0028162.1 mouse_genomes_project 4 137040371 137042245 + MGP_WSBEiJ_P0067469 Gale protein_coding protein_coding MGP_WSBEiJ_T0067470.1 MGP_WSBEiJ_G0028162.1 mouse_genomes_project 4 137040374 137043481 + Gale protein_coding retained_intron MGP_WSBEiJ_T0067471.1 MGP_WSBEiJ_G0028162.1 mouse_genomes_project 4 137040431 137042235 + MGP_WSBEiJ_P0067471 Gale protein_coding protein_coding MGP_WSBEiJ_T0067472.1 MGP_WSBEiJ_G0028162.1 mouse_genomes_project 4 137041780 137044785 + MGP_WSBEiJ_P0067472 Gale protein_coding protein_coding MGP_WSBEiJ_T0067473.1 MGP_WSBEiJ_G0028162.1 mouse_genomes_project 4 137041810 137043535 + Gale protein_coding retained_intron MGP_WSBEiJ_T0067474.1 MGP_WSBEiJ_G0028162.1 mouse_genomes_project 4 137042234 137044310 + Gale protein_coding retained_intron MGP_WSBEiJ_T0063916.1 MGP_WSBEiJ_G0027367.1 mouse_genomes_project 4 32467572 32501077 - MGP_WSBEiJ_P0063916 3110043O21Rik protein_coding protein_coding MGP_WSBEiJ_T0063917.1 MGP_WSBEiJ_G0027367.1 mouse_genomes_project 4 32467577 32501385 - MGP_WSBEiJ_P0063917 3110043O21Rik protein_coding protein_coding MGP_WSBEiJ_T0063918.1 MGP_WSBEiJ_G0027367.1 mouse_genomes_project 4 32473341 32483407 - 3110043O21Rik protein_coding retained_intron MGP_WSBEiJ_T0063919.1 MGP_WSBEiJ_G0027367.1 mouse_genomes_project 4 32486604 32501437 - 3110043O21Rik protein_coding retained_intron MGP_WSBEiJ_T0063920.1 MGP_WSBEiJ_G0027367.1 mouse_genomes_project 4 32493664 32501385 - 3110043O21Rik protein_coding processed_transcript MGP_WSBEiJ_T0063921.1 MGP_WSBEiJ_G0027367.1 mouse_genomes_project 4 32493848 32501385 - 3110043O21Rik protein_coding processed_transcript MGP_WSBEiJ_T0014132.1 MGP_WSBEiJ_G0012262.1 mouse_genomes_project 4 50178162 50178462 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063899.1 MGP_WSBEiJ_G0027361.1 mouse_genomes_project 4 32032037 32043410 - MGP_WSBEiJ_P0063899 Smim8 protein_coding protein_coding MGP_WSBEiJ_T0063900.1 MGP_WSBEiJ_G0027361.1 mouse_genomes_project 4 32032037 32043425 - MGP_WSBEiJ_P0063900 Smim8 protein_coding protein_coding MGP_WSBEiJ_T0063901.1 MGP_WSBEiJ_G0027361.1 mouse_genomes_project 4 32032037 32043484 - MGP_WSBEiJ_P0063901 Smim8 protein_coding protein_coding MGP_WSBEiJ_T0063902.1 MGP_WSBEiJ_G0027361.1 mouse_genomes_project 4 32032037 32043398 - MGP_WSBEiJ_P0063902 Smim8 protein_coding protein_coding MGP_WSBEiJ_T0063903.1 MGP_WSBEiJ_G0027361.1 mouse_genomes_project 4 32032037 32043331 - MGP_WSBEiJ_P0063903 Smim8 protein_coding protein_coding MGP_WSBEiJ_T0063904.1 MGP_WSBEiJ_G0027361.1 mouse_genomes_project 4 32032048 32043392 - Smim8 protein_coding processed_transcript MGP_WSBEiJ_T0063905.1 MGP_WSBEiJ_G0027361.1 mouse_genomes_project 4 32034246 32043416 - Smim8 protein_coding retained_intron MGP_WSBEiJ_T0063906.1 MGP_WSBEiJ_G0027361.1 mouse_genomes_project 4 32034596 32043279 - Smim8 protein_coding processed_transcript MGP_WSBEiJ_T0014224.1 MGP_WSBEiJ_G0012354.1 mouse_genomes_project 4 87286208 87286446 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063912.1 MGP_WSBEiJ_G0027364.1 mouse_genomes_project 4 32220253 32220595 - MGP_WSBEiJ_P0063912 protein_coding protein_coding MGP_WSBEiJ_T0099523.1 MGP_WSBEiJ_G0038186.1 mouse_genomes_project 4 53651469 53651603 - Gm22150 snoRNA snoRNA MGP_WSBEiJ_T0014376.1 MGP_WSBEiJ_G0012506.1 mouse_genomes_project 4 138381224 138381860 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098292.1 MGP_WSBEiJ_G0036955.1 mouse_genomes_project 4 124659324 124659428 - Gm22983 snRNA snRNA MGP_WSBEiJ_T0014036.1 MGP_WSBEiJ_G0012166.1 mouse_genomes_project 4 15701767 15705921 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066348.1 MGP_WSBEiJ_G0027909.1 mouse_genomes_project 4 119522933 119552939 - MGP_WSBEiJ_P0066348 Rimkla protein_coding protein_coding MGP_WSBEiJ_T0066349.1 MGP_WSBEiJ_G0027909.1 mouse_genomes_project 4 119532173 119552820 - Rimkla protein_coding processed_transcript MGP_WSBEiJ_T0007848.1 MGP_WSBEiJ_G0006413.1 mouse_genomes_project 4 130700344 130703491 + 1700003M07Rik lincRNA lincRNA MGP_WSBEiJ_T0007849.1 MGP_WSBEiJ_G0006413.1 mouse_genomes_project 4 130700778 130703628 + 1700003M07Rik lincRNA lincRNA MGP_WSBEiJ_T0011378.1 MGP_WSBEiJ_G0009535.1 mouse_genomes_project 4 109028172 109028446 - Gm23743 misc_RNA misc_RNA MGP_WSBEiJ_T0014079.1 MGP_WSBEiJ_G0012209.1 mouse_genomes_project 4 29351261 29352206 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010454.1 MGP_WSBEiJ_G0008611.1 mouse_genomes_project 4 130249644 130249773 - Mir8119 miRNA miRNA MGP_WSBEiJ_T0014219.1 MGP_WSBEiJ_G0012349.1 mouse_genomes_project 4 83982799 83983435 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099579.1 MGP_WSBEiJ_G0038242.1 mouse_genomes_project 4 156610433 156610577 + Gm26036 snoRNA snoRNA MGP_WSBEiJ_T0007783.1 MGP_WSBEiJ_G0006369.1 mouse_genomes_project 4 100821094 100822077 + Gm12801 lincRNA lincRNA MGP_WSBEiJ_T0066155.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117783922 117793123 + MGP_WSBEiJ_P0066155 Slc6a9 protein_coding protein_coding MGP_WSBEiJ_T0066156.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117784260 117825147 + MGP_WSBEiJ_P0066156 Slc6a9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066157.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117784365 117807187 + Slc6a9 protein_coding processed_transcript MGP_WSBEiJ_T0066158.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117793119 117818194 + MGP_WSBEiJ_P0066158 Slc6a9 protein_coding protein_coding MGP_WSBEiJ_T0066159.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117799208 117813956 + MGP_WSBEiJ_P0066159 Slc6a9 protein_coding protein_coding MGP_WSBEiJ_T0066160.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117799214 117813956 + MGP_WSBEiJ_P0066160 Slc6a9 protein_coding protein_coding MGP_WSBEiJ_T0066161.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117799385 117818377 + MGP_WSBEiJ_P0066161 Slc6a9 protein_coding protein_coding MGP_WSBEiJ_T0066162.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117805507 117807443 + MGP_WSBEiJ_P0066162 Slc6a9 protein_coding protein_coding MGP_WSBEiJ_T0066163.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117805559 117806043 + Slc6a9 protein_coding processed_transcript MGP_WSBEiJ_T0066177.1 MGP_WSBEiJ_G0027864.1 mouse_genomes_project 4 117824032 117825149 + Slc6a9 protein_coding retained_intron MGP_WSBEiJ_T0066831.1 MGP_WSBEiJ_G0028032.1 mouse_genomes_project 4 130143793 130170214 + MGP_WSBEiJ_P0066831 Bsdc1 protein_coding protein_coding MGP_WSBEiJ_T0066832.1 MGP_WSBEiJ_G0028032.1 mouse_genomes_project 4 130143884 130149205 + Bsdc1 protein_coding processed_transcript MGP_WSBEiJ_T0066833.1 MGP_WSBEiJ_G0028032.1 mouse_genomes_project 4 130143896 130152384 + Bsdc1 protein_coding retained_intron MGP_WSBEiJ_T0066834.1 MGP_WSBEiJ_G0028032.1 mouse_genomes_project 4 130143896 130149193 + Bsdc1 protein_coding processed_transcript MGP_WSBEiJ_T0066835.1 MGP_WSBEiJ_G0028032.1 mouse_genomes_project 4 130143899 130148178 + Bsdc1 protein_coding retained_intron MGP_WSBEiJ_T0066836.1 MGP_WSBEiJ_G0028032.1 mouse_genomes_project 4 130144048 130149205 + MGP_WSBEiJ_P0066836 Bsdc1 protein_coding protein_coding MGP_WSBEiJ_T0066837.1 MGP_WSBEiJ_G0028032.1 mouse_genomes_project 4 130146754 130147757 + Bsdc1 protein_coding processed_transcript MGP_WSBEiJ_T0066838.1 MGP_WSBEiJ_G0028032.1 mouse_genomes_project 4 130154117 130155963 + Bsdc1 protein_coding retained_intron MGP_WSBEiJ_T0067985.1 MGP_WSBEiJ_G0028301.1 mouse_genomes_project 4 149795214 149819484 - MGP_WSBEiJ_P0067985 Zfp933 protein_coding protein_coding MGP_WSBEiJ_T0067986.1 MGP_WSBEiJ_G0028301.1 mouse_genomes_project 4 149798791 149819484 - MGP_WSBEiJ_P0067986 Zfp933 protein_coding protein_coding MGP_WSBEiJ_T0065147.1 MGP_WSBEiJ_G0027651.1 mouse_genomes_project 4 88151743 88152407 - MGP_WSBEiJ_P0065147 Ifne protein_coding protein_coding MGP_WSBEiJ_T0014062.1 MGP_WSBEiJ_G0012192.1 mouse_genomes_project 4 24167811 24168081 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007707.1 MGP_WSBEiJ_G0006304.1 mouse_genomes_project 4 36023149 36324856 - lincRNA lincRNA MGP_WSBEiJ_T0007690.1 MGP_WSBEiJ_G0006288.1 mouse_genomes_project 4 13269320 13316520 + Gm11861 lincRNA lincRNA MGP_WSBEiJ_T0068027.1 MGP_WSBEiJ_G0028312.1 mouse_genomes_project 4 150113794 150149000 - MGP_WSBEiJ_P0068027 Draxin protein_coding protein_coding MGP_WSBEiJ_T0014326.1 MGP_WSBEiJ_G0012456.1 mouse_genomes_project 4 121285035 121285458 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098248.1 MGP_WSBEiJ_G0036911.1 mouse_genomes_project 4 38829191 38829299 - Gm26049 snRNA snRNA MGP_WSBEiJ_T0001376.1 MGP_WSBEiJ_G0001305.1 mouse_genomes_project 4 45748455 45852886 - TEC TEC MGP_WSBEiJ_T0004429.1 MGP_WSBEiJ_G0003848.1 mouse_genomes_project 4 114488966 114579596 - 9130410C08Rik antisense antisense MGP_WSBEiJ_T0098260.1 MGP_WSBEiJ_G0036923.1 mouse_genomes_project 4 66854714 66854885 + Gm23738 snRNA snRNA MGP_WSBEiJ_T0007779.1 MGP_WSBEiJ_G0006365.1 mouse_genomes_project 4 98620754 98637154 - Gm12681 lincRNA lincRNA MGP_WSBEiJ_T0010412.1 MGP_WSBEiJ_G0008569.1 mouse_genomes_project 4 38163041 38163120 + Mir207 miRNA miRNA MGP_WSBEiJ_T0065512.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106673080 106798068 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065513.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106673849 106817320 + MGP_WSBEiJ_P0065513 Ssbp3 protein_coding protein_coding MGP_WSBEiJ_T0065514.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106673890 106805741 + MGP_WSBEiJ_P0065514 Ssbp3 protein_coding protein_coding MGP_WSBEiJ_T0065515.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106673912 106816193 + MGP_WSBEiJ_P0065515 Ssbp3 protein_coding protein_coding MGP_WSBEiJ_T0065516.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106674046 106816124 + MGP_WSBEiJ_P0065516 Ssbp3 protein_coding protein_coding MGP_WSBEiJ_T0065517.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106674246 106775834 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065518.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106674683 106816141 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065519.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106687410 106798020 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065520.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106687450 106805247 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065521.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106705934 106816169 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065522.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106719754 106816318 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065523.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106731636 106798066 + MGP_WSBEiJ_P0065523 Ssbp3 protein_coding protein_coding MGP_WSBEiJ_T0065524.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106795194 106804362 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065525.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106797830 106798484 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065526.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106805200 106816145 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065527.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106805231 106807656 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0065528.1 MGP_WSBEiJ_G0027741.1 mouse_genomes_project 4 106814579 106816076 + Ssbp3 protein_coding processed_transcript MGP_WSBEiJ_T0064808.1 MGP_WSBEiJ_G0027571.1 mouse_genomes_project 4 60993571 61005071 - Alad protein_coding processed_transcript MGP_WSBEiJ_T0064809.1 MGP_WSBEiJ_G0027571.1 mouse_genomes_project 4 60993571 61005108 - MGP_WSBEiJ_P0064809 Alad protein_coding protein_coding MGP_WSBEiJ_T0064810.1 MGP_WSBEiJ_G0027571.1 mouse_genomes_project 4 60993571 61005084 - MGP_WSBEiJ_P0064810 Alad protein_coding protein_coding MGP_WSBEiJ_T0067903.1 MGP_WSBEiJ_G0028267.1 mouse_genomes_project 4 143408561 143412811 - Cela2a protein_coding retained_intron MGP_WSBEiJ_T0067904.1 MGP_WSBEiJ_G0028267.1 mouse_genomes_project 4 143408561 143419965 - MGP_WSBEiJ_P0067904 Cela2a protein_coding protein_coding MGP_WSBEiJ_T0067906.1 MGP_WSBEiJ_G0028267.1 mouse_genomes_project 4 143418754 143419805 - Cela2a protein_coding retained_intron MGP_WSBEiJ_T0007695.1 MGP_WSBEiJ_G0006292.1 mouse_genomes_project 4 19785627 19796480 - 1700025O08Rik lincRNA lincRNA MGP_WSBEiJ_T0010426.1 MGP_WSBEiJ_G0008583.1 mouse_genomes_project 4 66284587 66284664 + Gm44497 miRNA miRNA MGP_WSBEiJ_T0066811.1 MGP_WSBEiJ_G0028026.1 mouse_genomes_project 4 129864180 129898024 - MGP_WSBEiJ_P0066811 C77080 protein_coding protein_coding MGP_WSBEiJ_T0066812.1 MGP_WSBEiJ_G0028026.1 mouse_genomes_project 4 129864180 129872514 - MGP_WSBEiJ_P0066812 C77080 protein_coding protein_coding MGP_WSBEiJ_T0066813.1 MGP_WSBEiJ_G0028026.1 mouse_genomes_project 4 129864185 129888680 - MGP_WSBEiJ_P0066813 C77080 protein_coding protein_coding MGP_WSBEiJ_T0066814.1 MGP_WSBEiJ_G0028026.1 mouse_genomes_project 4 129869962 129919918 - MGP_WSBEiJ_P0066814 C77080 protein_coding protein_coding MGP_WSBEiJ_T0064881.1 MGP_WSBEiJ_G0027588.1 mouse_genomes_project 4 62400260 62431713 - MGP_WSBEiJ_P0064881 Tnfsf8 protein_coding protein_coding MGP_WSBEiJ_T0099516.1 MGP_WSBEiJ_G0038179.1 mouse_genomes_project 4 45846256 45846399 + Gm22670 snoRNA snoRNA MGP_WSBEiJ_T0066153.1 MGP_WSBEiJ_G0027862.1 mouse_genomes_project 4 117673994 117676455 + MGP_WSBEiJ_P0066153 Gm12845 protein_coding protein_coding MGP_WSBEiJ_T0007889.1 MGP_WSBEiJ_G0006446.1 mouse_genomes_project 4 142914318 142917364 + Gm13074 lincRNA lincRNA MGP_WSBEiJ_T0099555.1 MGP_WSBEiJ_G0038218.1 mouse_genomes_project 4 118131776 118131880 + Gm23382 snoRNA snoRNA MGP_WSBEiJ_T0004371.1 MGP_WSBEiJ_G0003808.1 mouse_genomes_project 4 42714149 42723292 - Gm12679 antisense antisense MGP_WSBEiJ_T0067209.1 MGP_WSBEiJ_G0028106.1 mouse_genomes_project 4 134408855 134424259 - MGP_WSBEiJ_P0067209 Nudc protein_coding unknown_likely_coding MGP_WSBEiJ_T0067210.1 MGP_WSBEiJ_G0028106.1 mouse_genomes_project 4 134409456 134409752 - Nudc protein_coding processed_transcript MGP_WSBEiJ_T0067211.1 MGP_WSBEiJ_G0028106.1 mouse_genomes_project 4 134410554 134412215 - Nudc protein_coding processed_transcript MGP_WSBEiJ_T0065484.1 MGP_WSBEiJ_G0027736.1 mouse_genomes_project 4 106390203 106392674 + MGP_WSBEiJ_P0065484 Pars2 protein_coding protein_coding MGP_WSBEiJ_T0065485.1 MGP_WSBEiJ_G0027736.1 mouse_genomes_project 4 106390232 106394415 + MGP_WSBEiJ_P0065485 Pars2 protein_coding protein_coding MGP_WSBEiJ_T0065486.1 MGP_WSBEiJ_G0027736.1 mouse_genomes_project 4 106390237 106392001 + Pars2 protein_coding processed_transcript MGP_WSBEiJ_T0065487.1 MGP_WSBEiJ_G0027736.1 mouse_genomes_project 4 106390240 106394417 + MGP_WSBEiJ_P0065487 Pars2 protein_coding protein_coding MGP_WSBEiJ_T0064424.1 MGP_WSBEiJ_G0027465.1 mouse_genomes_project 4 43657620 43699975 + MGP_WSBEiJ_P0064424 Stra6l protein_coding protein_coding MGP_WSBEiJ_T0064425.1 MGP_WSBEiJ_G0027465.1 mouse_genomes_project 4 43657772 43699975 + MGP_WSBEiJ_P0064425 Stra6l protein_coding protein_coding MGP_WSBEiJ_T0064426.1 MGP_WSBEiJ_G0027465.1 mouse_genomes_project 4 43657903 43699975 + MGP_WSBEiJ_P0064426 Stra6l protein_coding protein_coding MGP_WSBEiJ_T0064427.1 MGP_WSBEiJ_G0027465.1 mouse_genomes_project 4 43657953 43671075 + Stra6l protein_coding processed_transcript MGP_WSBEiJ_T0064428.1 MGP_WSBEiJ_G0027465.1 mouse_genomes_project 4 43687203 43699585 + Stra6l protein_coding retained_intron MGP_WSBEiJ_T0067336.1 MGP_WSBEiJ_G0028132.1 mouse_genomes_project 4 135312537 135329331 - MGP_WSBEiJ_P0067336 Extl1 protein_coding protein_coding MGP_WSBEiJ_T0067337.1 MGP_WSBEiJ_G0028132.1 mouse_genomes_project 4 135317365 135339868 - Extl1 protein_coding processed_transcript MGP_WSBEiJ_T0067338.1 MGP_WSBEiJ_G0028132.1 mouse_genomes_project 4 135319497 135322209 - Extl1 protein_coding processed_transcript MGP_WSBEiJ_T0064484.1 MGP_WSBEiJ_G0027479.1 mouse_genomes_project 4 44467466 44515945 - MGP_WSBEiJ_P0064484 Tbc1d2 protein_coding protein_coding MGP_WSBEiJ_T0064485.1 MGP_WSBEiJ_G0027479.1 mouse_genomes_project 4 44497446 44515945 - MGP_WSBEiJ_P0064485 Tbc1d2 protein_coding protein_coding MGP_WSBEiJ_T0063862.1 MGP_WSBEiJ_G0027353.1 mouse_genomes_project 4 31175734 31187488 + Cnr1 protein_coding processed_transcript MGP_WSBEiJ_T0063863.1 MGP_WSBEiJ_G0027353.1 mouse_genomes_project 4 31175773 31200998 + MGP_WSBEiJ_P0063863 Cnr1 protein_coding protein_coding MGP_WSBEiJ_T0063864.1 MGP_WSBEiJ_G0027353.1 mouse_genomes_project 4 31177343 31200986 + MGP_WSBEiJ_P0063864 Cnr1 protein_coding protein_coding MGP_WSBEiJ_T0067381.1 MGP_WSBEiJ_G0028144.1 mouse_genomes_project 4 135928440 135932521 + Rsrp1 protein_coding retained_intron MGP_WSBEiJ_T0067382.1 MGP_WSBEiJ_G0028144.1 mouse_genomes_project 4 135928440 135932521 + MGP_WSBEiJ_P0067382 Rsrp1 protein_coding protein_coding MGP_WSBEiJ_T0067383.1 MGP_WSBEiJ_G0028144.1 mouse_genomes_project 4 135928441 135930272 + Rsrp1 protein_coding processed_transcript MGP_WSBEiJ_T0067384.1 MGP_WSBEiJ_G0028144.1 mouse_genomes_project 4 135928474 135930182 + Rsrp1 protein_coding processed_transcript MGP_WSBEiJ_T0067385.1 MGP_WSBEiJ_G0028144.1 mouse_genomes_project 4 135928493 135932222 + Rsrp1 protein_coding processed_transcript MGP_WSBEiJ_T0067386.1 MGP_WSBEiJ_G0028144.1 mouse_genomes_project 4 135929308 135932222 + Rsrp1 protein_coding processed_transcript MGP_WSBEiJ_T0067387.1 MGP_WSBEiJ_G0028144.1 mouse_genomes_project 4 135929558 135930204 + Rsrp1 protein_coding processed_transcript MGP_WSBEiJ_T0067388.1 MGP_WSBEiJ_G0028144.1 mouse_genomes_project 4 135930294 135931803 + Rsrp1 protein_coding processed_transcript MGP_WSBEiJ_T0064135.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40678048 40692014 - MGP_WSBEiJ_P0064135 Fam214b protein_coding protein_coding MGP_WSBEiJ_T0064136.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40678048 40692409 - MGP_WSBEiJ_P0064136 Fam214b protein_coding protein_coding MGP_WSBEiJ_T0064137.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40678048 40686521 - MGP_WSBEiJ_P0064137 Fam214b protein_coding protein_coding MGP_WSBEiJ_T0064138.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40678048 40691986 - MGP_WSBEiJ_P0064138 Fam214b protein_coding protein_coding MGP_WSBEiJ_T0064139.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40678048 40686524 - MGP_WSBEiJ_P0064139 Fam214b protein_coding protein_coding MGP_WSBEiJ_T0064140.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40678048 40692409 - MGP_WSBEiJ_P0064140 Fam214b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064141.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40681959 40686528 - MGP_WSBEiJ_P0064141 Fam214b protein_coding protein_coding MGP_WSBEiJ_T0064142.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40682240 40682942 - MGP_WSBEiJ_P0064142 Fam214b protein_coding protein_coding MGP_WSBEiJ_T0064143.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40682343 40685564 - MGP_WSBEiJ_P0064143 Fam214b protein_coding protein_coding MGP_WSBEiJ_T0064144.1 MGP_WSBEiJ_G0027418.1 mouse_genomes_project 4 40682617 40691948 - Fam214b protein_coding processed_transcript MGP_WSBEiJ_T0007709.1 MGP_WSBEiJ_G0006306.1 mouse_genomes_project 4 37927895 37973750 - 4933428C19Rik lincRNA lincRNA MGP_WSBEiJ_T0068009.1 MGP_WSBEiJ_G0028306.1 mouse_genomes_project 4 149929906 149936216 + MGP_WSBEiJ_P0068009 2510039O18Rik protein_coding protein_coding MGP_WSBEiJ_T0004466.1 MGP_WSBEiJ_G0003878.1 mouse_genomes_project 4 131446631 131447275 - Gm12970 antisense antisense MGP_WSBEiJ_T0064559.1 MGP_WSBEiJ_G0027501.1 mouse_genomes_project 4 47557261 47571844 - MGP_WSBEiJ_P0064559 Aldob protein_coding protein_coding MGP_WSBEiJ_T0064560.1 MGP_WSBEiJ_G0027501.1 mouse_genomes_project 4 47558300 47560133 - Aldob protein_coding processed_transcript MGP_WSBEiJ_T0064561.1 MGP_WSBEiJ_G0027501.1 mouse_genomes_project 4 47559803 47561153 - Aldob protein_coding processed_transcript MGP_WSBEiJ_T0064190.1 MGP_WSBEiJ_G0027423.1 mouse_genomes_project 4 41089840 41095969 + MGP_WSBEiJ_P0064190 Tesk1 protein_coding protein_coding MGP_WSBEiJ_T0064191.1 MGP_WSBEiJ_G0027423.1 mouse_genomes_project 4 41091234 41095699 + MGP_WSBEiJ_P0064191 Tesk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064192.1 MGP_WSBEiJ_G0027423.1 mouse_genomes_project 4 41092497 41093303 + Tesk1 protein_coding retained_intron MGP_WSBEiJ_T0064193.1 MGP_WSBEiJ_G0027423.1 mouse_genomes_project 4 41092630 41093740 + Tesk1 protein_coding retained_intron MGP_WSBEiJ_T0064194.1 MGP_WSBEiJ_G0027423.1 mouse_genomes_project 4 41092872 41093934 + Tesk1 protein_coding retained_intron MGP_WSBEiJ_T0097054.1 MGP_WSBEiJ_G0035735.1 mouse_genomes_project 4 80919679 80919790 + n-R5s187 rRNA rRNA MGP_WSBEiJ_T0064363.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42480823 42486917 + MGP_WSBEiJ_P0064363 Zcchc7 protein_coding protein_coding MGP_WSBEiJ_T0064364.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42481514 42673392 + MGP_WSBEiJ_P0064364 Zcchc7 protein_coding protein_coding MGP_WSBEiJ_T0064365.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42481534 42652138 + Zcchc7 protein_coding retained_intron MGP_WSBEiJ_T0064366.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42481585 42487174 + MGP_WSBEiJ_P0064366 Zcchc7 protein_coding protein_coding MGP_WSBEiJ_T0064367.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42481593 42650156 + MGP_WSBEiJ_P0064367 Zcchc7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064368.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42485389 42653200 + Zcchc7 protein_coding retained_intron MGP_WSBEiJ_T0064369.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42647541 42672551 + Zcchc7 protein_coding processed_transcript MGP_WSBEiJ_T0064370.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42664298 42673404 + MGP_WSBEiJ_P0064370 Zcchc7 protein_coding protein_coding MGP_WSBEiJ_T0064371.1 MGP_WSBEiJ_G0027452.1 mouse_genomes_project 4 42667171 42672551 + MGP_WSBEiJ_P0064371 Zcchc7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000313.1 MGP_WSBEiJ_G0000261.1 mouse_genomes_project 4 78953117 78953180 + mt-Tt Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0098295.1 MGP_WSBEiJ_G0036958.1 mouse_genomes_project 4 127642911 127643017 - Gm25600 snRNA snRNA MGP_WSBEiJ_T0017471.1 MGP_WSBEiJ_G0014977.1 mouse_genomes_project 4 88706033 88749722 + Gm12610 processed_transcript processed_transcript MGP_WSBEiJ_T0099567.1 MGP_WSBEiJ_G0038230.1 mouse_genomes_project 4 131904557 131904691 + Gm25261 snoRNA snoRNA MGP_WSBEiJ_T0067505.1 MGP_WSBEiJ_G0028170.1 mouse_genomes_project 4 137351208 137377854 + Tcea3 protein_coding processed_transcript MGP_WSBEiJ_T0067506.1 MGP_WSBEiJ_G0028170.1 mouse_genomes_project 4 137351431 137381518 + MGP_WSBEiJ_P0067506 Tcea3 protein_coding protein_coding MGP_WSBEiJ_T0067507.1 MGP_WSBEiJ_G0028170.1 mouse_genomes_project 4 137351452 137369115 + MGP_WSBEiJ_P0067507 Tcea3 protein_coding protein_coding MGP_WSBEiJ_T0065171.1 MGP_WSBEiJ_G0027659.1 mouse_genomes_project 4 92665314 92666693 - MGP_WSBEiJ_P0065171 Tusc1 protein_coding protein_coding MGP_WSBEiJ_T0007776.1 MGP_WSBEiJ_G0006363.1 mouse_genomes_project 4 94559252 94575608 + Gm12708 lincRNA lincRNA MGP_WSBEiJ_T0007777.1 MGP_WSBEiJ_G0006363.1 mouse_genomes_project 4 94559301 94572129 + Gm12708 lincRNA lincRNA MGP_WSBEiJ_T0065130.1 MGP_WSBEiJ_G0027638.1 mouse_genomes_project 4 87810077 87810647 - MGP_WSBEiJ_P0065130 Ifna14 protein_coding protein_coding MGP_WSBEiJ_T0010425.1 MGP_WSBEiJ_G0008582.1 mouse_genomes_project 4 61769042 61769124 + Mir455 miRNA miRNA MGP_WSBEiJ_T0010417.1 MGP_WSBEiJ_G0008574.1 mouse_genomes_project 4 41295905 41296038 + Gm25262 miRNA miRNA MGP_WSBEiJ_T0007741.1 MGP_WSBEiJ_G0006331.1 mouse_genomes_project 4 56504117 56533558 + Gm26889 lincRNA lincRNA MGP_WSBEiJ_T0007818.1 MGP_WSBEiJ_G0006396.1 mouse_genomes_project 4 124623106 124631734 - 1700021L23Rik lincRNA lincRNA MGP_WSBEiJ_T0067743.1 MGP_WSBEiJ_G0028228.1 mouse_genomes_project 4 141042317 141069206 + MGP_WSBEiJ_P0067743 Aldh4a1 protein_coding protein_coding MGP_WSBEiJ_T0067744.1 MGP_WSBEiJ_G0028228.1 mouse_genomes_project 4 141042345 141069203 + Aldh4a1 protein_coding processed_transcript MGP_WSBEiJ_T0067745.1 MGP_WSBEiJ_G0028228.1 mouse_genomes_project 4 141042560 141055017 + Aldh4a1 protein_coding processed_transcript MGP_WSBEiJ_T0065008.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82436993 82475965 + MGP_WSBEiJ_P0065008 Snapc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065009.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82436993 82467611 + MGP_WSBEiJ_P0065009 Snapc3 protein_coding protein_coding MGP_WSBEiJ_T0065010.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82437000 82462760 + MGP_WSBEiJ_P0065010 Snapc3 protein_coding protein_coding MGP_WSBEiJ_T0065011.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82437013 82468304 + MGP_WSBEiJ_P0065011 Snapc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065012.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82437013 82481338 + MGP_WSBEiJ_P0065012 Snapc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065013.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82437018 82481794 + MGP_WSBEiJ_P0065013 Snapc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065014.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82468076 82481285 + Snapc3 protein_coding processed_transcript MGP_WSBEiJ_T0065015.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82468224 82480246 + Snapc3 protein_coding processed_transcript MGP_WSBEiJ_T0065022.1 MGP_WSBEiJ_G0027616.1 mouse_genomes_project 4 82478094 82481330 + Snapc3 protein_coding retained_intron MGP_WSBEiJ_T0007901.1 MGP_WSBEiJ_G0006458.1 mouse_genomes_project 4 155084096 155087111 + Gm833 lincRNA lincRNA MGP_WSBEiJ_T0068264.1 MGP_WSBEiJ_G0028357.1 mouse_genomes_project 4 153288188 153298842 - MGP_WSBEiJ_P0068264 Vamp3 protein_coding protein_coding MGP_WSBEiJ_T0068265.1 MGP_WSBEiJ_G0028357.1 mouse_genomes_project 4 153291297 153298835 - Vamp3 protein_coding retained_intron MGP_WSBEiJ_T0068266.1 MGP_WSBEiJ_G0028357.1 mouse_genomes_project 4 153296799 153298852 - Vamp3 protein_coding retained_intron MGP_WSBEiJ_T0067521.1 MGP_WSBEiJ_G0028173.1 mouse_genomes_project 4 137534900 137559168 + MGP_WSBEiJ_P0067521 Htr1d protein_coding protein_coding MGP_WSBEiJ_T0067522.1 MGP_WSBEiJ_G0028173.1 mouse_genomes_project 4 137534902 137558530 + MGP_WSBEiJ_P0067522 Htr1d protein_coding protein_coding MGP_WSBEiJ_T0067523.1 MGP_WSBEiJ_G0028173.1 mouse_genomes_project 4 137534906 137558530 + MGP_WSBEiJ_P0067523 Htr1d protein_coding protein_coding MGP_WSBEiJ_T0067524.1 MGP_WSBEiJ_G0028173.1 mouse_genomes_project 4 137535968 137556733 + Htr1d protein_coding processed_transcript MGP_WSBEiJ_T0014001.1 MGP_WSBEiJ_G0012131.1 mouse_genomes_project 4 4796483 4796943 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064792.1 MGP_WSBEiJ_G0027567.1 mouse_genomes_project 4 60912085 60919776 - MGP_WSBEiJ_P0064792 Rnf183 protein_coding protein_coding MGP_WSBEiJ_T0064793.1 MGP_WSBEiJ_G0027567.1 mouse_genomes_project 4 60912087 60919244 - MGP_WSBEiJ_P0064793 Rnf183 protein_coding protein_coding MGP_WSBEiJ_T0064794.1 MGP_WSBEiJ_G0027567.1 mouse_genomes_project 4 60912532 60913105 - MGP_WSBEiJ_P0064794 Rnf183 protein_coding protein_coding MGP_WSBEiJ_T0066395.1 MGP_WSBEiJ_G0027920.1 mouse_genomes_project 4 120703663 120730023 + MGP_WSBEiJ_P0066395 Gm8439 protein_coding protein_coding MGP_WSBEiJ_T0067165.1 MGP_WSBEiJ_G0028095.1 mouse_genomes_project 4 133962168 134036375 + MGP_WSBEiJ_P0067165 Wasf2 protein_coding protein_coding MGP_WSBEiJ_T0067166.1 MGP_WSBEiJ_G0028095.1 mouse_genomes_project 4 133962203 134020110 + MGP_WSBEiJ_P0067166 Wasf2 protein_coding protein_coding MGP_WSBEiJ_T0067167.1 MGP_WSBEiJ_G0028095.1 mouse_genomes_project 4 133962292 134010378 + Wasf2 protein_coding processed_transcript MGP_WSBEiJ_T0067168.1 MGP_WSBEiJ_G0028095.1 mouse_genomes_project 4 134009818 134010430 + Wasf2 protein_coding processed_transcript MGP_WSBEiJ_T0067169.1 MGP_WSBEiJ_G0028095.1 mouse_genomes_project 4 134010188 134033123 + MGP_WSBEiJ_P0067169 Wasf2 protein_coding protein_coding MGP_WSBEiJ_T0067170.1 MGP_WSBEiJ_G0028095.1 mouse_genomes_project 4 134024043 134025575 + Wasf2 protein_coding processed_transcript MGP_WSBEiJ_T0098277.1 MGP_WSBEiJ_G0036940.1 mouse_genomes_project 4 108312322 108312429 - Gm24967 snRNA snRNA MGP_WSBEiJ_T0064887.1 MGP_WSBEiJ_G0027591.1 mouse_genomes_project 4 64010864 65057891 - MGP_WSBEiJ_P0064887 Astn2 protein_coding protein_coding MGP_WSBEiJ_T0064888.1 MGP_WSBEiJ_G0027591.1 mouse_genomes_project 4 64010864 65057763 - MGP_WSBEiJ_P0064888 Astn2 protein_coding protein_coding MGP_WSBEiJ_T0064461.1 MGP_WSBEiJ_G0027472.1 mouse_genomes_project 4 44186116 44188921 + MGP_WSBEiJ_P0064461 Foxe1 protein_coding protein_coding MGP_WSBEiJ_T0065579.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107095031 107145119 + MGP_WSBEiJ_P0065579 Yipf1 protein_coding protein_coding MGP_WSBEiJ_T0065580.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107095037 107102045 + Yipf1 protein_coding processed_transcript MGP_WSBEiJ_T0065581.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107095052 107135100 + MGP_WSBEiJ_P0065581 Yipf1 protein_coding protein_coding MGP_WSBEiJ_T0065582.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107095080 107127221 + MGP_WSBEiJ_P0065582 Yipf1 protein_coding protein_coding MGP_WSBEiJ_T0065583.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107095105 107099626 + MGP_WSBEiJ_P0065583 Yipf1 protein_coding protein_coding MGP_WSBEiJ_T0065584.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107095800 107096506 + Yipf1 protein_coding processed_transcript MGP_WSBEiJ_T0065585.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107096431 107126832 + Yipf1 protein_coding processed_transcript MGP_WSBEiJ_T0065586.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107099580 107145120 + Yipf1 protein_coding processed_transcript MGP_WSBEiJ_T0065587.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107106393 107118666 + Yipf1 protein_coding processed_transcript MGP_WSBEiJ_T0065588.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107125264 107136217 + Yipf1 protein_coding processed_transcript MGP_WSBEiJ_T0065589.1 MGP_WSBEiJ_G0027751.1 mouse_genomes_project 4 107126707 107145119 + Yipf1 protein_coding processed_transcript MGP_WSBEiJ_T0063670.1 MGP_WSBEiJ_G0027303.1 mouse_genomes_project 4 12665685 12694407 + MGP_WSBEiJ_P0063670 Calb1 protein_coding protein_coding MGP_WSBEiJ_T0063671.1 MGP_WSBEiJ_G0027303.1 mouse_genomes_project 4 12665687 12681175 + Calb1 protein_coding retained_intron MGP_WSBEiJ_T0063672.1 MGP_WSBEiJ_G0027303.1 mouse_genomes_project 4 12670220 12681547 + Calb1 protein_coding retained_intron MGP_WSBEiJ_T0099549.1 MGP_WSBEiJ_G0038212.1 mouse_genomes_project 4 105841380 105841495 - Gm26047 snoRNA snoRNA MGP_WSBEiJ_T0065889.1 MGP_WSBEiJ_G0027807.1 mouse_genomes_project 4 114794448 114820326 - MGP_WSBEiJ_P0065889 Cyp4x1 protein_coding protein_coding MGP_WSBEiJ_T0065145.1 MGP_WSBEiJ_G0027649.1 mouse_genomes_project 4 88104004 88104565 + MGP_WSBEiJ_P0065145 protein_coding protein_coding MGP_WSBEiJ_T0064961.1 MGP_WSBEiJ_G0027609.1 mouse_genomes_project 4 79909081 79952967 + MGP_WSBEiJ_P0064961 Lurap1l protein_coding protein_coding MGP_WSBEiJ_T0014040.1 MGP_WSBEiJ_G0012170.1 mouse_genomes_project 4 17894303 17895364 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099522.1 MGP_WSBEiJ_G0038185.1 mouse_genomes_project 4 53467127 53467342 - Gm25419 snoRNA snoRNA MGP_WSBEiJ_T0065055.1 MGP_WSBEiJ_G0027621.1 mouse_genomes_project 4 84284605 84486022 + MGP_WSBEiJ_P0065055 Sh3gl2 protein_coding protein_coding MGP_WSBEiJ_T0065056.1 MGP_WSBEiJ_G0027621.1 mouse_genomes_project 4 84284920 84475871 + MGP_WSBEiJ_P0065056 Sh3gl2 protein_coding protein_coding MGP_WSBEiJ_T0065057.1 MGP_WSBEiJ_G0027621.1 mouse_genomes_project 4 84284948 84724711 + MGP_WSBEiJ_P0065057 Sh3gl2 protein_coding protein_coding MGP_WSBEiJ_T0065058.1 MGP_WSBEiJ_G0027621.1 mouse_genomes_project 4 84285014 84464161 + MGP_WSBEiJ_P0065058 Sh3gl2 protein_coding protein_coding MGP_WSBEiJ_T0065059.1 MGP_WSBEiJ_G0027621.1 mouse_genomes_project 4 84462810 84474091 + MGP_WSBEiJ_P0065059 Sh3gl2 protein_coding protein_coding MGP_WSBEiJ_T0068258.1 MGP_WSBEiJ_G0028355.1 mouse_genomes_project 4 153235268 153239984 + MGP_WSBEiJ_P0068258 Uts2 protein_coding protein_coding MGP_WSBEiJ_T0066396.1 MGP_WSBEiJ_G0027921.1 mouse_genomes_project 4 120796636 120797885 + MGP_WSBEiJ_P0066396 Cited4 protein_coding protein_coding MGP_WSBEiJ_T0067996.1 MGP_WSBEiJ_G0028304.1 mouse_genomes_project 4 149858087 149893988 - MGP_WSBEiJ_P0067996 Mfn2 protein_coding protein_coding MGP_WSBEiJ_T0067997.1 MGP_WSBEiJ_G0028304.1 mouse_genomes_project 4 149858087 149894005 - MGP_WSBEiJ_P0067997 Mfn2 protein_coding protein_coding MGP_WSBEiJ_T0067998.1 MGP_WSBEiJ_G0028304.1 mouse_genomes_project 4 149858504 149893999 - MGP_WSBEiJ_P0067998 Mfn2 protein_coding protein_coding MGP_WSBEiJ_T0067999.1 MGP_WSBEiJ_G0028304.1 mouse_genomes_project 4 149866238 149893999 - MGP_WSBEiJ_P0067999 Mfn2 protein_coding protein_coding MGP_WSBEiJ_T0068000.1 MGP_WSBEiJ_G0028304.1 mouse_genomes_project 4 149870451 149872317 - Mfn2 protein_coding processed_transcript MGP_WSBEiJ_T0068001.1 MGP_WSBEiJ_G0028304.1 mouse_genomes_project 4 149872127 149892698 - MGP_WSBEiJ_P0068001 Mfn2 protein_coding protein_coding MGP_WSBEiJ_T0068002.1 MGP_WSBEiJ_G0028304.1 mouse_genomes_project 4 149882078 149893959 - MGP_WSBEiJ_P0068002 Mfn2 protein_coding protein_coding MGP_WSBEiJ_T0096824.1 MGP_WSBEiJ_G0035505.1 mouse_genomes_project 4 98173016 98173104 + pseudogene pseudogene MGP_WSBEiJ_T0001377.1 MGP_WSBEiJ_G0001306.1 mouse_genomes_project 4 98756131 98758595 + TEC TEC MGP_WSBEiJ_T0065287.1 MGP_WSBEiJ_G0027687.1 mouse_genomes_project 4 98248521 98253884 - MGP_WSBEiJ_P0065287 I0C0044D17Rik protein_coding protein_coding MGP_WSBEiJ_T0065288.1 MGP_WSBEiJ_G0027687.1 mouse_genomes_project 4 98249859 98250369 - MGP_WSBEiJ_P0065288 I0C0044D17Rik protein_coding protein_coding MGP_WSBEiJ_T0007904.1 MGP_WSBEiJ_G0006461.1 mouse_genomes_project 4 156368535 156369816 + Gm13115 lincRNA lincRNA MGP_WSBEiJ_T0004355.1 MGP_WSBEiJ_G0003795.1 mouse_genomes_project 4 25881395 25882169 - Gm11915 antisense antisense MGP_WSBEiJ_T0004367.1 MGP_WSBEiJ_G0003804.1 mouse_genomes_project 4 41296019 41306088 - Gm12473 antisense antisense MGP_WSBEiJ_T0014268.1 MGP_WSBEiJ_G0012398.1 mouse_genomes_project 4 101460898 101461914 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017454.1 MGP_WSBEiJ_G0014965.1 mouse_genomes_project 4 41783112 41801342 + Gm12503 processed_transcript processed_transcript MGP_WSBEiJ_T0063499.1 MGP_WSBEiJ_G0027267.1 mouse_genomes_project 4 2893231 2903293 - MGP_WSBEiJ_P0063499 Cyp7a1 protein_coding protein_coding MGP_WSBEiJ_T0063500.1 MGP_WSBEiJ_G0027267.1 mouse_genomes_project 4 2900420 2903295 - Cyp7a1 protein_coding processed_transcript MGP_WSBEiJ_T0007750.1 MGP_WSBEiJ_G0006340.1 mouse_genomes_project 4 66687371 66803333 + lincRNA lincRNA MGP_WSBEiJ_T0014241.1 MGP_WSBEiJ_G0012371.1 mouse_genomes_project 4 92949815 92950125 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068003.1 MGP_WSBEiJ_G0028305.1 mouse_genomes_project 4 149898944 149925733 - MGP_WSBEiJ_P0068003 Plod1 protein_coding protein_coding MGP_WSBEiJ_T0068004.1 MGP_WSBEiJ_G0028305.1 mouse_genomes_project 4 149904774 149910100 - MGP_WSBEiJ_P0068004 Plod1 protein_coding protein_coding MGP_WSBEiJ_T0068005.1 MGP_WSBEiJ_G0028305.1 mouse_genomes_project 4 149911465 149925708 - Plod1 protein_coding retained_intron MGP_WSBEiJ_T0068006.1 MGP_WSBEiJ_G0028305.1 mouse_genomes_project 4 149911852 149912741 - Plod1 protein_coding retained_intron MGP_WSBEiJ_T0068007.1 MGP_WSBEiJ_G0028305.1 mouse_genomes_project 4 149916601 149925691 - MGP_WSBEiJ_P0068007 Plod1 protein_coding protein_coding MGP_WSBEiJ_T0068008.1 MGP_WSBEiJ_G0028305.1 mouse_genomes_project 4 149920633 149925674 - Plod1 protein_coding processed_transcript MGP_WSBEiJ_T0004444.1 MGP_WSBEiJ_G0003862.1 mouse_genomes_project 4 119293788 119298246 - Gm12927 antisense antisense MGP_WSBEiJ_T0014177.1 MGP_WSBEiJ_G0012307.1 mouse_genomes_project 4 68755694 68756725 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014135.1 MGP_WSBEiJ_G0012265.1 mouse_genomes_project 4 50458129 50459518 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014275.1 MGP_WSBEiJ_G0012405.1 mouse_genomes_project 4 105204506 105204957 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064589.1 MGP_WSBEiJ_G0027509.1 mouse_genomes_project 4 50939812 50940772 + MGP_WSBEiJ_P0064589 Olfr275 protein_coding protein_coding MGP_WSBEiJ_T0064954.1 MGP_WSBEiJ_G0027605.1 mouse_genomes_project 4 78949898 78950375 + MGP_WSBEiJ_P0064954 protein_coding protein_coding MGP_WSBEiJ_T0007718.1 MGP_WSBEiJ_G0006314.1 mouse_genomes_project 4 43523865 43525119 + Gm12410 lincRNA lincRNA MGP_WSBEiJ_T0099535.1 MGP_WSBEiJ_G0038198.1 mouse_genomes_project 4 73393008 73393146 + Gm26379 snoRNA snoRNA MGP_WSBEiJ_T0098273.1 MGP_WSBEiJ_G0036936.1 mouse_genomes_project 4 100633121 100633184 - Gm22100 snRNA snRNA MGP_WSBEiJ_T0067035.1 MGP_WSBEiJ_G0028068.1 mouse_genomes_project 4 132589692 132617081 + MGP_WSBEiJ_P0067035 Srsf4 protein_coding protein_coding MGP_WSBEiJ_T0067036.1 MGP_WSBEiJ_G0028068.1 mouse_genomes_project 4 132589891 132608216 + MGP_WSBEiJ_P0067036 Srsf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067037.1 MGP_WSBEiJ_G0028068.1 mouse_genomes_project 4 132600370 132612234 + MGP_WSBEiJ_P0067037 Srsf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067038.1 MGP_WSBEiJ_G0028068.1 mouse_genomes_project 4 132601283 132617081 + Srsf4 protein_coding retained_intron MGP_WSBEiJ_T0067039.1 MGP_WSBEiJ_G0028068.1 mouse_genomes_project 4 132601302 132618944 + MGP_WSBEiJ_P0067039 Srsf4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065128.1 MGP_WSBEiJ_G0027636.1 mouse_genomes_project 4 87809952 87810669 - MGP_WSBEiJ_P0065128 Ifna9 protein_coding protein_coding MGP_WSBEiJ_T0068342.1 MGP_WSBEiJ_G0028370.1 mouse_genomes_project 4 154520263 154620789 + MGP_WSBEiJ_P0068342 Acot7 protein_coding protein_coding MGP_WSBEiJ_T0068343.1 MGP_WSBEiJ_G0028370.1 mouse_genomes_project 4 154527847 154564965 + Acot7 protein_coding processed_transcript MGP_WSBEiJ_T0068344.1 MGP_WSBEiJ_G0028370.1 mouse_genomes_project 4 154528216 154620792 + MGP_WSBEiJ_P0068344 Acot7 protein_coding protein_coding MGP_WSBEiJ_T0068345.1 MGP_WSBEiJ_G0028370.1 mouse_genomes_project 4 154528288 154620784 + MGP_WSBEiJ_P0068345 Acot7 protein_coding protein_coding MGP_WSBEiJ_T0068346.1 MGP_WSBEiJ_G0028370.1 mouse_genomes_project 4 154542953 154620784 + MGP_WSBEiJ_P0068346 Acot7 protein_coding protein_coding MGP_WSBEiJ_T0068347.1 MGP_WSBEiJ_G0028370.1 mouse_genomes_project 4 154543008 154565045 + Acot7 protein_coding processed_transcript MGP_WSBEiJ_T0067118.1 MGP_WSBEiJ_G0028084.1 mouse_genomes_project 4 133351345 133370971 + MGP_WSBEiJ_P0067118 Ptafr protein_coding protein_coding MGP_WSBEiJ_T0065765.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109162559 109262231 + MGP_WSBEiJ_P0065765 Eps15 protein_coding protein_coding MGP_WSBEiJ_T0065766.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109162594 109260101 + MGP_WSBEiJ_P0065766 Eps15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065767.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109162667 109193683 + MGP_WSBEiJ_P0065767 Eps15 protein_coding protein_coding MGP_WSBEiJ_T0065768.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109162703 109259878 + MGP_WSBEiJ_P0065768 Eps15 protein_coding protein_coding MGP_WSBEiJ_T0065769.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109162703 109259878 + MGP_WSBEiJ_P0065769 Eps15 protein_coding protein_coding MGP_WSBEiJ_T0065770.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109185251 109186713 + Eps15 protein_coding retained_intron MGP_WSBEiJ_T0065771.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109189924 109193982 + Eps15 protein_coding retained_intron MGP_WSBEiJ_T0065772.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109223575 109260980 + MGP_WSBEiJ_P0065772 Eps15 protein_coding protein_coding MGP_WSBEiJ_T0065773.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109223769 109241263 + Eps15 protein_coding retained_intron MGP_WSBEiJ_T0065774.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109244980 109260197 + MGP_WSBEiJ_P0065774 Eps15 protein_coding protein_coding MGP_WSBEiJ_T0065775.1 MGP_WSBEiJ_G0027782.1 mouse_genomes_project 4 109245024 109257271 + Eps15 protein_coding processed_transcript MGP_WSBEiJ_T0066779.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129747914 129760346 - MGP_WSBEiJ_P0066779 Hpca protein_coding protein_coding MGP_WSBEiJ_T0066780.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129747914 129757278 - MGP_WSBEiJ_P0066780 Hpca protein_coding protein_coding MGP_WSBEiJ_T0066781.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129747920 129760050 - MGP_WSBEiJ_P0066781 Hpca protein_coding protein_coding MGP_WSBEiJ_T0066782.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129747920 129759601 - MGP_WSBEiJ_P0066782 Hpca protein_coding protein_coding MGP_WSBEiJ_T0066783.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129748590 129759257 - MGP_WSBEiJ_P0066783 Hpca protein_coding protein_coding MGP_WSBEiJ_T0066784.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129748604 129760199 - MGP_WSBEiJ_P0066784 Hpca protein_coding protein_coding MGP_WSBEiJ_T0066785.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129748779 129760235 - MGP_WSBEiJ_P0066785 Hpca protein_coding protein_coding MGP_WSBEiJ_T0066786.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129749782 129760049 - MGP_WSBEiJ_P0066786 Hpca protein_coding protein_coding MGP_WSBEiJ_T0066787.1 MGP_WSBEiJ_G0028022.1 mouse_genomes_project 4 129756915 129760018 - MGP_WSBEiJ_P0066787 Hpca protein_coding protein_coding MGP_WSBEiJ_T0014262.1 MGP_WSBEiJ_G0012392.1 mouse_genomes_project 4 100104760 100105214 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007864.1 MGP_WSBEiJ_G0006425.1 mouse_genomes_project 4 133916754 133919944 + Gm26615 lincRNA lincRNA MGP_WSBEiJ_T0004533.1 MGP_WSBEiJ_G0003931.1 mouse_genomes_project 4 157380131 157385478 - Gm13112 antisense antisense MGP_WSBEiJ_T0004534.1 MGP_WSBEiJ_G0003931.1 mouse_genomes_project 4 157380707 157388010 - Gm13112 antisense antisense MGP_WSBEiJ_T0007819.1 MGP_WSBEiJ_G0006397.1 mouse_genomes_project 4 124646525 124652652 - 4933435F18Rik lincRNA lincRNA MGP_WSBEiJ_T0007820.1 MGP_WSBEiJ_G0006397.1 mouse_genomes_project 4 124651561 124652611 - 4933435F18Rik lincRNA lincRNA MGP_WSBEiJ_T0066434.1 MGP_WSBEiJ_G0027932.1 mouse_genomes_project 4 121460531 121592803 - MGP_WSBEiJ_P0066434 Gm12887 protein_coding protein_coding MGP_WSBEiJ_T0010481.1 MGP_WSBEiJ_G0008638.1 mouse_genomes_project 4 151798813 151798877 - Mir7023 miRNA miRNA MGP_WSBEiJ_T0099578.1 MGP_WSBEiJ_G0038241.1 mouse_genomes_project 4 156336255 156336387 + Gm25880 snoRNA snoRNA MGP_WSBEiJ_T0014320.1 MGP_WSBEiJ_G0012450.1 mouse_genomes_project 4 119570212 119570626 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004369.1 MGP_WSBEiJ_G0003806.1 mouse_genomes_project 4 42387208 42408298 + Gm12462 antisense antisense MGP_WSBEiJ_T0007834.1 MGP_WSBEiJ_G0006403.1 mouse_genomes_project 4 128084709 128085970 + 1700080G11Rik lincRNA lincRNA MGP_WSBEiJ_T0014297.1 MGP_WSBEiJ_G0012427.1 mouse_genomes_project 4 111754365 111755417 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014236.1 MGP_WSBEiJ_G0012366.1 mouse_genomes_project 4 91028125 91029457 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064933.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74740676 75268695 - MGP_WSBEiJ_P0064933 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064934.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74740677 74941548 - MGP_WSBEiJ_P0064934 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064935.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74744161 75421384 - MGP_WSBEiJ_P0064935 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064936.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74744312 75142843 - MGP_WSBEiJ_P0064936 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064937.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74744312 75142822 - MGP_WSBEiJ_P0064937 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064938.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74744312 75142843 - MGP_WSBEiJ_P0064938 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064939.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74744312 75142843 - MGP_WSBEiJ_P0064939 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064940.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74744312 75142843 - MGP_WSBEiJ_P0064940 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064941.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74744312 75162852 - MGP_WSBEiJ_P0064941 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064942.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74891874 74911817 - Ptprd protein_coding retained_intron MGP_WSBEiJ_T0064943.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74893997 74896143 - MGP_WSBEiJ_P0064943 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064944.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74909760 74917617 - MGP_WSBEiJ_P0064944 Ptprd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064945.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74940824 74941809 - MGP_WSBEiJ_P0064945 Ptprd protein_coding protein_coding MGP_WSBEiJ_T0064946.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74952460 77105873 - Ptprd protein_coding processed_transcript MGP_WSBEiJ_T0064947.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 74953436 75142867 - Ptprd protein_coding processed_transcript MGP_WSBEiJ_T0064948.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 75418513 77105845 - Ptprd protein_coding processed_transcript MGP_WSBEiJ_T0064949.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 75420634 77105717 - Ptprd protein_coding processed_transcript MGP_WSBEiJ_T0064950.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 76045497 77105717 - Ptprd protein_coding retained_intron MGP_WSBEiJ_T0064951.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 76207042 77105876 - Ptprd protein_coding processed_transcript MGP_WSBEiJ_T0064952.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 76805567 77105830 - Ptprd protein_coding processed_transcript MGP_WSBEiJ_T0064953.1 MGP_WSBEiJ_G0027604.1 mouse_genomes_project 4 76813102 77105821 - Ptprd protein_coding retained_intron MGP_WSBEiJ_T0065883.1 MGP_WSBEiJ_G0027806.1 mouse_genomes_project 4 114773042 114778377 + MGP_WSBEiJ_P0065883 Pdzk1ip1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065884.1 MGP_WSBEiJ_G0027806.1 mouse_genomes_project 4 114773160 114778405 + MGP_WSBEiJ_P0065884 Pdzk1ip1 protein_coding protein_coding MGP_WSBEiJ_T0065885.1 MGP_WSBEiJ_G0027806.1 mouse_genomes_project 4 114773495 114775805 + Pdzk1ip1 protein_coding processed_transcript MGP_WSBEiJ_T0065886.1 MGP_WSBEiJ_G0027806.1 mouse_genomes_project 4 114774645 114778375 + Pdzk1ip1 protein_coding processed_transcript MGP_WSBEiJ_T0065887.1 MGP_WSBEiJ_G0027806.1 mouse_genomes_project 4 114774712 114775690 + Pdzk1ip1 protein_coding processed_transcript MGP_WSBEiJ_T0065888.1 MGP_WSBEiJ_G0027806.1 mouse_genomes_project 4 114775390 114778375 + Pdzk1ip1 protein_coding processed_transcript MGP_WSBEiJ_T0014325.1 MGP_WSBEiJ_G0012455.1 mouse_genomes_project 4 121278365 121278868 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068232.1 MGP_WSBEiJ_G0028350.1 mouse_genomes_project 4 152836625 152862210 - MGP_WSBEiJ_P0068232 Slc45a1 protein_coding protein_coding MGP_WSBEiJ_T0068233.1 MGP_WSBEiJ_G0028350.1 mouse_genomes_project 4 152838091 152862134 - MGP_WSBEiJ_P0068233 Slc45a1 protein_coding protein_coding MGP_WSBEiJ_T0068234.1 MGP_WSBEiJ_G0028350.1 mouse_genomes_project 4 152853387 152854188 - Slc45a1 protein_coding retained_intron MGP_WSBEiJ_T0010411.1 MGP_WSBEiJ_G0008568.1 mouse_genomes_project 4 34015997 34016074 + Mir873b miRNA miRNA MGP_WSBEiJ_T0098275.1 MGP_WSBEiJ_G0036938.1 mouse_genomes_project 4 100807849 100808013 + Gm25124 snRNA snRNA MGP_WSBEiJ_T0011380.1 MGP_WSBEiJ_G0009537.1 mouse_genomes_project 4 116602676 116602767 + Gm27688 misc_RNA misc_RNA MGP_WSBEiJ_T0014109.1 MGP_WSBEiJ_G0012239.1 mouse_genomes_project 4 38155537 38155934 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099538.1 MGP_WSBEiJ_G0038201.1 mouse_genomes_project 4 78188396 78188519 - Gm25836 snoRNA snoRNA MGP_WSBEiJ_T0065478.1 MGP_WSBEiJ_G0027734.1 mouse_genomes_project 4 106329851 106355713 - MGP_WSBEiJ_P0065478 Lexm protein_coding protein_coding MGP_WSBEiJ_T0065479.1 MGP_WSBEiJ_G0027734.1 mouse_genomes_project 4 106329851 106355716 - MGP_WSBEiJ_P0065479 Lexm protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065480.1 MGP_WSBEiJ_G0027734.1 mouse_genomes_project 4 106329851 106346147 - MGP_WSBEiJ_P0065480 Lexm protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065481.1 MGP_WSBEiJ_G0027734.1 mouse_genomes_project 4 106330252 106355713 - MGP_WSBEiJ_P0065481 Lexm protein_coding protein_coding MGP_WSBEiJ_T0065619.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693181 107702751 + MGP_WSBEiJ_P0065619 0610037L13Rik protein_coding protein_coding MGP_WSBEiJ_T0065620.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693193 107700347 + MGP_WSBEiJ_P0065620 0610037L13Rik protein_coding protein_coding MGP_WSBEiJ_T0065621.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693217 107700629 + 0610037L13Rik protein_coding processed_transcript MGP_WSBEiJ_T0065622.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693231 107700485 + MGP_WSBEiJ_P0065622 0610037L13Rik protein_coding protein_coding MGP_WSBEiJ_T0065623.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693234 107699228 + MGP_WSBEiJ_P0065623 0610037L13Rik protein_coding protein_coding MGP_WSBEiJ_T0065624.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693237 107698715 + MGP_WSBEiJ_P0065624 0610037L13Rik protein_coding protein_coding MGP_WSBEiJ_T0065625.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693266 107700485 + MGP_WSBEiJ_P0065625 0610037L13Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065626.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693267 107701169 + MGP_WSBEiJ_P0065626 0610037L13Rik protein_coding protein_coding MGP_WSBEiJ_T0065627.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693276 107695372 + MGP_WSBEiJ_P0065627 0610037L13Rik protein_coding protein_coding MGP_WSBEiJ_T0065628.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693487 107700531 + 0610037L13Rik protein_coding processed_transcript MGP_WSBEiJ_T0065629.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693595 107700424 + 0610037L13Rik protein_coding processed_transcript MGP_WSBEiJ_T0065630.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107693608 107700485 + 0610037L13Rik protein_coding processed_transcript MGP_WSBEiJ_T0065631.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107696542 107700420 + 0610037L13Rik protein_coding retained_intron MGP_WSBEiJ_T0065632.1 MGP_WSBEiJ_G0027757.1 mouse_genomes_project 4 107696738 107700485 + MGP_WSBEiJ_P0065632 0610037L13Rik protein_coding protein_coding MGP_WSBEiJ_T0100835.1 MGP_WSBEiJ_G0039293.1 mouse_genomes_project 4 118898926 118899881 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011622.1 MGP_WSBEiJ_G0009765.1 mouse_genomes_project 4 140194988 140198309 + MGP_WSBEiJ_P0011622 Pla2g2a polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0011623.1 MGP_WSBEiJ_G0009765.1 mouse_genomes_project 4 140194991 140198312 + MGP_WSBEiJ_P0011623 Pla2g2a polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011624.1 MGP_WSBEiJ_G0009765.1 mouse_genomes_project 4 140195007 140197000 + Pla2g2a polymorphic_pseudogene processed_transcript MGP_WSBEiJ_T0011625.1 MGP_WSBEiJ_G0009765.1 mouse_genomes_project 4 140196389 140198312 + Pla2g2a polymorphic_pseudogene retained_intron MGP_WSBEiJ_T0014193.1 MGP_WSBEiJ_G0012323.1 mouse_genomes_project 4 74092156 74093336 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067559.1 MGP_WSBEiJ_G0028186.1 mouse_genomes_project 4 138485028 138524831 - MGP_WSBEiJ_P0067559 Cdc42 protein_coding protein_coding MGP_WSBEiJ_T0067560.1 MGP_WSBEiJ_G0028186.1 mouse_genomes_project 4 138487094 138524810 - MGP_WSBEiJ_P0067560 Cdc42 protein_coding protein_coding MGP_WSBEiJ_T0099557.1 MGP_WSBEiJ_G0038220.1 mouse_genomes_project 4 121234127 121234252 - Gm26186 snoRNA snoRNA MGP_WSBEiJ_T0066690.1 MGP_WSBEiJ_G0027999.1 mouse_genomes_project 4 127549431 127559871 + MGP_WSBEiJ_P0066690 Sfpq protein_coding protein_coding MGP_WSBEiJ_T0066691.1 MGP_WSBEiJ_G0027999.1 mouse_genomes_project 4 127551490 127555951 + Sfpq protein_coding processed_transcript MGP_WSBEiJ_T0066692.1 MGP_WSBEiJ_G0027999.1 mouse_genomes_project 4 127551634 127565636 + Sfpq protein_coding processed_transcript MGP_WSBEiJ_T0066693.1 MGP_WSBEiJ_G0027999.1 mouse_genomes_project 4 127554558 127555249 + Sfpq protein_coding processed_transcript MGP_WSBEiJ_T0066694.1 MGP_WSBEiJ_G0027999.1 mouse_genomes_project 4 127554590 127556650 + Sfpq protein_coding processed_transcript MGP_WSBEiJ_T0066695.1 MGP_WSBEiJ_G0027999.1 mouse_genomes_project 4 127555079 127556184 + Sfpq protein_coding processed_transcript MGP_WSBEiJ_T0065076.1 MGP_WSBEiJ_G0027625.1 mouse_genomes_project 4 85691406 85725905 - MGP_WSBEiJ_P0065076 Haus6 protein_coding protein_coding MGP_WSBEiJ_T0065077.1 MGP_WSBEiJ_G0027625.1 mouse_genomes_project 4 85697613 85725905 - Haus6 protein_coding processed_transcript MGP_WSBEiJ_T0065078.1 MGP_WSBEiJ_G0027625.1 mouse_genomes_project 4 85715460 85725869 - Haus6 protein_coding processed_transcript MGP_WSBEiJ_T0065079.1 MGP_WSBEiJ_G0027625.1 mouse_genomes_project 4 85718224 85725899 - MGP_WSBEiJ_P0065079 Haus6 protein_coding protein_coding MGP_WSBEiJ_T0010471.1 MGP_WSBEiJ_G0008628.1 mouse_genomes_project 4 139609843 139609912 - Mir7019 miRNA miRNA MGP_WSBEiJ_T0067962.1 MGP_WSBEiJ_G0028293.1 mouse_genomes_project 4 146477388 146497875 - MGP_WSBEiJ_P0067962 Gm436 protein_coding protein_coding MGP_WSBEiJ_T0064600.1 MGP_WSBEiJ_G0027514.1 mouse_genomes_project 4 51129156 51139650 + MGP_WSBEiJ_P0064600 Nipsnap3b protein_coding protein_coding MGP_WSBEiJ_T0064601.1 MGP_WSBEiJ_G0027514.1 mouse_genomes_project 4 51129226 51139166 + MGP_WSBEiJ_P0064601 Nipsnap3b protein_coding protein_coding MGP_WSBEiJ_T0064602.1 MGP_WSBEiJ_G0027514.1 mouse_genomes_project 4 51138565 51139095 + Nipsnap3b protein_coding processed_transcript MGP_WSBEiJ_T0065895.1 MGP_WSBEiJ_G0027812.1 mouse_genomes_project 4 115253614 115263579 - MGP_WSBEiJ_P0065895 Cyp4a14 protein_coding protein_coding MGP_WSBEiJ_T0065896.1 MGP_WSBEiJ_G0027812.1 mouse_genomes_project 4 115261482 115263577 - Cyp4a14 protein_coding processed_transcript MGP_WSBEiJ_T0014049.1 MGP_WSBEiJ_G0012179.1 mouse_genomes_project 4 20515032 20515449 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064755.1 MGP_WSBEiJ_G0027554.1 mouse_genomes_project 4 57989064 58029225 + MGP_WSBEiJ_P0064755 Hsdl2 protein_coding protein_coding MGP_WSBEiJ_T0064756.1 MGP_WSBEiJ_G0027554.1 mouse_genomes_project 4 57989146 58029224 + MGP_WSBEiJ_P0064756 Hsdl2 protein_coding protein_coding MGP_WSBEiJ_T0064757.1 MGP_WSBEiJ_G0027554.1 mouse_genomes_project 4 58003965 58011518 + MGP_WSBEiJ_P0064757 Hsdl2 protein_coding protein_coding MGP_WSBEiJ_T0014129.1 MGP_WSBEiJ_G0012259.1 mouse_genomes_project 4 48099107 48099602 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066125.1 MGP_WSBEiJ_G0027858.1 mouse_genomes_project 4 117175770 117196193 + MGP_WSBEiJ_P0066125 Tmem53 protein_coding protein_coding MGP_WSBEiJ_T0066126.1 MGP_WSBEiJ_G0027858.1 mouse_genomes_project 4 117175859 117196127 + MGP_WSBEiJ_P0066126 Tmem53 protein_coding protein_coding MGP_WSBEiJ_T0066127.1 MGP_WSBEiJ_G0027858.1 mouse_genomes_project 4 117175861 117196195 + MGP_WSBEiJ_P0066127 Tmem53 protein_coding protein_coding MGP_WSBEiJ_T0066128.1 MGP_WSBEiJ_G0027858.1 mouse_genomes_project 4 117175881 117195509 + Tmem53 protein_coding processed_transcript MGP_WSBEiJ_T0066129.1 MGP_WSBEiJ_G0027858.1 mouse_genomes_project 4 117176159 117196193 + MGP_WSBEiJ_P0066129 Tmem53 protein_coding protein_coding MGP_WSBEiJ_T0066130.1 MGP_WSBEiJ_G0027858.1 mouse_genomes_project 4 117192983 117196195 + Tmem53 protein_coding processed_transcript MGP_WSBEiJ_T0066329.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119370088 119410024 - Ccdc30 protein_coding retained_intron MGP_WSBEiJ_T0066330.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119371037 119466184 - MGP_WSBEiJ_P0066330 Ccdc30 protein_coding protein_coding MGP_WSBEiJ_T0066331.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119388498 119403374 - Ccdc30 protein_coding retained_intron MGP_WSBEiJ_T0066332.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119402512 119466171 - MGP_WSBEiJ_P0066332 Ccdc30 protein_coding unknown_likely_coding MGP_WSBEiJ_T0066333.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119402519 119434631 - MGP_WSBEiJ_P0066333 Ccdc30 protein_coding protein_coding MGP_WSBEiJ_T0066334.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119402520 119409817 - Ccdc30 protein_coding processed_transcript MGP_WSBEiJ_T0066335.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119403463 119444400 - MGP_WSBEiJ_P0066335 Ccdc30 protein_coding protein_coding MGP_WSBEiJ_T0066336.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119409928 119428053 - Ccdc30 protein_coding processed_transcript MGP_WSBEiJ_T0066337.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119417884 119434705 - Ccdc30 protein_coding processed_transcript MGP_WSBEiJ_T0066338.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119417886 119430019 - Ccdc30 protein_coding retained_intron MGP_WSBEiJ_T0066339.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119417894 119434631 - MGP_WSBEiJ_P0066339 Ccdc30 protein_coding protein_coding MGP_WSBEiJ_T0066340.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119424291 119434617 - Ccdc30 protein_coding retained_intron MGP_WSBEiJ_T0066341.1 MGP_WSBEiJ_G0027906.1 mouse_genomes_project 4 119443620 119451802 - Ccdc30 protein_coding processed_transcript MGP_WSBEiJ_T0067280.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135049510 135073977 + MGP_WSBEiJ_P0067280 Ubxn11 protein_coding protein_coding MGP_WSBEiJ_T0067281.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135049515 135072385 + Ubxn11 protein_coding processed_transcript MGP_WSBEiJ_T0067282.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135049548 135072994 + Ubxn11 protein_coding processed_transcript MGP_WSBEiJ_T0067283.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135049560 135073995 + Ubxn11 protein_coding processed_transcript MGP_WSBEiJ_T0067284.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135049563 135063372 + MGP_WSBEiJ_P0067284 Ubxn11 protein_coding protein_coding MGP_WSBEiJ_T0067285.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135049564 135057441 + Ubxn11 protein_coding processed_transcript MGP_WSBEiJ_T0067286.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135055595 135060184 + Ubxn11 protein_coding processed_transcript MGP_WSBEiJ_T0067287.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135059764 135070818 + Ubxn11 protein_coding processed_transcript MGP_WSBEiJ_T0067288.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135070688 135073994 + Ubxn11 protein_coding processed_transcript MGP_WSBEiJ_T0067289.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135071270 135073720 + MGP_WSBEiJ_P0067289 Ubxn11 protein_coding protein_coding MGP_WSBEiJ_T0067290.1 MGP_WSBEiJ_G0028120.1 mouse_genomes_project 4 135073146 135073995 + Ubxn11 protein_coding processed_transcript MGP_WSBEiJ_T0065546.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106905788 106951291 - MGP_WSBEiJ_P0065546 Tceanc2 protein_coding protein_coding MGP_WSBEiJ_T0065547.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106912023 106951110 - MGP_WSBEiJ_P0065547 Tceanc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065548.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106912078 106951027 - Tceanc2 protein_coding processed_transcript MGP_WSBEiJ_T0065549.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106912286 106951847 - MGP_WSBEiJ_P0065549 Tceanc2 protein_coding protein_coding MGP_WSBEiJ_T0065550.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106912330 106951026 - MGP_WSBEiJ_P0065550 Tceanc2 protein_coding protein_coding MGP_WSBEiJ_T0065551.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106912450 106951860 - MGP_WSBEiJ_P0065551 Tceanc2 protein_coding protein_coding MGP_WSBEiJ_T0065552.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106938403 106950595 - Tceanc2 protein_coding processed_transcript MGP_WSBEiJ_T0065553.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106945751 106950952 - Tceanc2 protein_coding processed_transcript MGP_WSBEiJ_T0065554.1 MGP_WSBEiJ_G0027745.1 mouse_genomes_project 4 106949359 106950412 - Tceanc2 protein_coding processed_transcript MGP_WSBEiJ_T0097390.1 MGP_WSBEiJ_G0036064.1 mouse_genomes_project 4 81611848 81614039 - Gm11267 sense_intronic sense_intronic MGP_WSBEiJ_T0014080.1 MGP_WSBEiJ_G0012210.1 mouse_genomes_project 4 29781071 29781501 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064081.1 MGP_WSBEiJ_G0027410.1 mouse_genomes_project 4 40505217 40511418 - MGP_WSBEiJ_P0064081 Fam205c protein_coding protein_coding MGP_WSBEiJ_T0064082.1 MGP_WSBEiJ_G0027410.1 mouse_genomes_project 4 40505416 40511410 - MGP_WSBEiJ_P0064082 Fam205c protein_coding protein_coding MGP_WSBEiJ_T0064083.1 MGP_WSBEiJ_G0027410.1 mouse_genomes_project 4 40508713 40510936 - Fam205c protein_coding processed_transcript MGP_WSBEiJ_T0064084.1 MGP_WSBEiJ_G0027410.1 mouse_genomes_project 4 40508901 40511449 - Fam205c protein_coding processed_transcript MGP_WSBEiJ_T0066298.1 MGP_WSBEiJ_G0027901.1 mouse_genomes_project 4 119243856 119256969 - MGP_WSBEiJ_P0066298 4930538K18Rik protein_coding protein_coding MGP_WSBEiJ_T0067232.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134752581 134797751 - MGP_WSBEiJ_P0067232 Rps6ka1 protein_coding protein_coding MGP_WSBEiJ_T0067233.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134752586 134797916 - MGP_WSBEiJ_P0067233 Rps6ka1 protein_coding protein_coding MGP_WSBEiJ_T0067234.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134752590 134783922 - MGP_WSBEiJ_P0067234 Rps6ka1 protein_coding protein_coding MGP_WSBEiJ_T0067235.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134752590 134797903 - MGP_WSBEiJ_P0067235 Rps6ka1 protein_coding protein_coding MGP_WSBEiJ_T0067236.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134753111 134781489 - MGP_WSBEiJ_P0067236 Rps6ka1 protein_coding protein_coding MGP_WSBEiJ_T0067237.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134753343 134782204 - MGP_WSBEiJ_P0067237 Rps6ka1 protein_coding protein_coding MGP_WSBEiJ_T0067238.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134755378 134765200 - Rps6ka1 protein_coding retained_intron MGP_WSBEiJ_T0067239.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134764437 134765312 - Rps6ka1 protein_coding retained_intron MGP_WSBEiJ_T0067240.1 MGP_WSBEiJ_G0028113.1 mouse_genomes_project 4 134781139 134797693 - Rps6ka1 protein_coding processed_transcript MGP_WSBEiJ_T0011364.1 MGP_WSBEiJ_G0009521.1 mouse_genomes_project 4 45509365 45509492 + Gm27601 misc_RNA misc_RNA MGP_WSBEiJ_T0067675.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140156112 140180037 - MGP_WSBEiJ_P0067675 Pla2g5 protein_coding protein_coding MGP_WSBEiJ_T0067676.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140156112 140180036 - MGP_WSBEiJ_P0067676 Pla2g5 protein_coding protein_coding MGP_WSBEiJ_T0067677.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140156117 140225785 - MGP_WSBEiJ_P0067677 Pla2g5 protein_coding protein_coding MGP_WSBEiJ_T0067678.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140157213 140172867 - MGP_WSBEiJ_P0067678 Pla2g5 protein_coding protein_coding MGP_WSBEiJ_T0067679.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140157425 140172913 - Pla2g5 protein_coding processed_transcript MGP_WSBEiJ_T0067680.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140161462 140180038 - Pla2g5 protein_coding processed_transcript MGP_WSBEiJ_T0067681.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140161476 140180009 - Pla2g5 protein_coding processed_transcript MGP_WSBEiJ_T0067682.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140163288 140168248 - Pla2g5 protein_coding processed_transcript MGP_WSBEiJ_T0067683.1 MGP_WSBEiJ_G0028211.1 mouse_genomes_project 4 140221629 140225765 - Pla2g5 protein_coding processed_transcript MGP_WSBEiJ_T0010462.1 MGP_WSBEiJ_G0008619.1 mouse_genomes_project 4 134437645 134437771 - Gm23158 miRNA miRNA MGP_WSBEiJ_T0065263.1 MGP_WSBEiJ_G0027683.1 mouse_genomes_project 4 97767273 97798341 - MGP_WSBEiJ_P0065263 Tm2d1 protein_coding protein_coding MGP_WSBEiJ_T0065264.1 MGP_WSBEiJ_G0027683.1 mouse_genomes_project 4 97767273 97798155 - MGP_WSBEiJ_P0065264 Tm2d1 protein_coding protein_coding MGP_WSBEiJ_T0065265.1 MGP_WSBEiJ_G0027683.1 mouse_genomes_project 4 97767273 97790129 - MGP_WSBEiJ_P0065265 Tm2d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065266.1 MGP_WSBEiJ_G0027683.1 mouse_genomes_project 4 97767273 97798401 - MGP_WSBEiJ_P0065266 Tm2d1 protein_coding protein_coding MGP_WSBEiJ_T0065267.1 MGP_WSBEiJ_G0027683.1 mouse_genomes_project 4 97767508 97798327 - MGP_WSBEiJ_P0065267 Tm2d1 protein_coding protein_coding MGP_WSBEiJ_T0065468.1 MGP_WSBEiJ_G0027729.1 mouse_genomes_project 4 105493765 105500702 + MGP_WSBEiJ_P0065468 Gm12728 protein_coding protein_coding MGP_WSBEiJ_T0065469.1 MGP_WSBEiJ_G0027729.1 mouse_genomes_project 4 105494429 105500702 + MGP_WSBEiJ_P0065469 Gm12728 protein_coding protein_coding MGP_WSBEiJ_T0065470.1 MGP_WSBEiJ_G0027729.1 mouse_genomes_project 4 105500492 105500985 + Gm12728 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0017476.1 MGP_WSBEiJ_G0014981.1 mouse_genomes_project 4 94855970 94859418 + Gm12707 processed_transcript processed_transcript MGP_WSBEiJ_T0067564.1 MGP_WSBEiJ_G0028189.1 mouse_genomes_project 4 138656934 138659111 + MGP_WSBEiJ_P0067564 1700013G24Rik protein_coding protein_coding MGP_WSBEiJ_T0007850.1 MGP_WSBEiJ_G0006414.1 mouse_genomes_project 4 131401550 131405979 - Gm26516 lincRNA lincRNA MGP_WSBEiJ_T0066154.1 MGP_WSBEiJ_G0027863.1 mouse_genomes_project 4 117704882 117713511 - MGP_WSBEiJ_P0066154 Klf17 protein_coding protein_coding MGP_WSBEiJ_T0064409.1 MGP_WSBEiJ_G0027461.1 mouse_genomes_project 4 43163163 43203418 - MGP_WSBEiJ_P0064409 Slc25a51 protein_coding protein_coding MGP_WSBEiJ_T0064410.1 MGP_WSBEiJ_G0027461.1 mouse_genomes_project 4 43163494 43203304 - MGP_WSBEiJ_P0064410 Slc25a51 protein_coding protein_coding MGP_WSBEiJ_T0064411.1 MGP_WSBEiJ_G0027461.1 mouse_genomes_project 4 43163524 43195542 - MGP_WSBEiJ_P0064411 Slc25a51 protein_coding protein_coding MGP_WSBEiJ_T0064412.1 MGP_WSBEiJ_G0027461.1 mouse_genomes_project 4 43183890 43203424 - MGP_WSBEiJ_P0064412 Slc25a51 protein_coding protein_coding MGP_WSBEiJ_T0064413.1 MGP_WSBEiJ_G0027461.1 mouse_genomes_project 4 43201816 43203393 - Slc25a51 protein_coding processed_transcript MGP_WSBEiJ_T0066263.1 MGP_WSBEiJ_G0027885.1 mouse_genomes_project 4 118691666 118692641 - MGP_WSBEiJ_P0066263 Olfr1342 protein_coding protein_coding MGP_WSBEiJ_T0100838.1 MGP_WSBEiJ_G0039296.1 mouse_genomes_project 4 121957165 122790309 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014126.1 MGP_WSBEiJ_G0012256.1 mouse_genomes_project 4 47341850 47342856 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066141.1 MGP_WSBEiJ_G0027860.1 mouse_genomes_project 4 117504816 117629140 + MGP_WSBEiJ_P0066141 Eri3 protein_coding protein_coding MGP_WSBEiJ_T0066142.1 MGP_WSBEiJ_G0027860.1 mouse_genomes_project 4 117507056 117537017 + MGP_WSBEiJ_P0066142 Eri3 protein_coding protein_coding MGP_WSBEiJ_T0066143.1 MGP_WSBEiJ_G0027860.1 mouse_genomes_project 4 117519097 117629140 + Eri3 protein_coding processed_transcript MGP_WSBEiJ_T0066144.1 MGP_WSBEiJ_G0027860.1 mouse_genomes_project 4 117536986 117570030 + MGP_WSBEiJ_P0066144 Eri3 protein_coding protein_coding MGP_WSBEiJ_T0066145.1 MGP_WSBEiJ_G0027860.1 mouse_genomes_project 4 117543380 117569689 + Eri3 protein_coding processed_transcript MGP_WSBEiJ_T0066146.1 MGP_WSBEiJ_G0027860.1 mouse_genomes_project 4 117592621 117629124 + Eri3 protein_coding processed_transcript MGP_WSBEiJ_T0068103.1 MGP_WSBEiJ_G0028326.1 mouse_genomes_project 4 150890171 151041712 + MGP_WSBEiJ_P0068103 Casz1 protein_coding protein_coding MGP_WSBEiJ_T0068104.1 MGP_WSBEiJ_G0028326.1 mouse_genomes_project 4 150890171 151051280 + MGP_WSBEiJ_P0068104 Casz1 protein_coding protein_coding MGP_WSBEiJ_T0068105.1 MGP_WSBEiJ_G0028326.1 mouse_genomes_project 4 150890207 150927214 + Casz1 protein_coding processed_transcript MGP_WSBEiJ_T0068106.1 MGP_WSBEiJ_G0028326.1 mouse_genomes_project 4 150984599 150987156 + Casz1 protein_coding processed_transcript MGP_WSBEiJ_T0068107.1 MGP_WSBEiJ_G0028326.1 mouse_genomes_project 4 150996339 151029452 + MGP_WSBEiJ_P0068107 Casz1 protein_coding protein_coding MGP_WSBEiJ_T0068108.1 MGP_WSBEiJ_G0028326.1 mouse_genomes_project 4 151029669 151037064 + MGP_WSBEiJ_P0068108 Casz1 protein_coding protein_coding MGP_WSBEiJ_T0067842.1 MGP_WSBEiJ_G0028251.1 mouse_genomes_project 4 142935345 142951716 + MGP_WSBEiJ_P0067842 Fam131c protein_coding protein_coding MGP_WSBEiJ_T0064991.1 MGP_WSBEiJ_G0027613.1 mouse_genomes_project 4 81896743 81900133 - MGP_WSBEiJ_P0064991 Cer1 protein_coding protein_coding MGP_WSBEiJ_T0065338.1 MGP_WSBEiJ_G0027698.1 mouse_genomes_project 4 99602982 99970942 + MGP_WSBEiJ_P0065338 Ror1 protein_coding protein_coding MGP_WSBEiJ_T0014023.1 MGP_WSBEiJ_G0012153.1 mouse_genomes_project 4 12414462 12414786 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068599.1 MGP_WSBEiJ_G0028413.1 mouse_genomes_project 4 158209788 158215251 + Cdk11b protein_coding processed_transcript MGP_WSBEiJ_T0068600.1 MGP_WSBEiJ_G0028413.1 mouse_genomes_project 4 158209803 158234775 + MGP_WSBEiJ_P0068600 Cdk11b protein_coding protein_coding MGP_WSBEiJ_T0068601.1 MGP_WSBEiJ_G0028413.1 mouse_genomes_project 4 158209814 158210631 + Cdk11b protein_coding processed_transcript MGP_WSBEiJ_T0068602.1 MGP_WSBEiJ_G0028413.1 mouse_genomes_project 4 158209817 158234775 + MGP_WSBEiJ_P0068602 Cdk11b protein_coding protein_coding MGP_WSBEiJ_T0068603.1 MGP_WSBEiJ_G0028413.1 mouse_genomes_project 4 158209844 158234775 + MGP_WSBEiJ_P0068603 Cdk11b protein_coding protein_coding MGP_WSBEiJ_T0068604.1 MGP_WSBEiJ_G0028413.1 mouse_genomes_project 4 158219064 158224130 + Cdk11b protein_coding processed_transcript MGP_WSBEiJ_T0068605.1 MGP_WSBEiJ_G0028413.1 mouse_genomes_project 4 158232037 158233242 + Cdk11b protein_coding processed_transcript MGP_WSBEiJ_T0068606.1 MGP_WSBEiJ_G0028413.1 mouse_genomes_project 4 158232202 158233129 + Cdk11b protein_coding processed_transcript MGP_WSBEiJ_T0017527.1 MGP_WSBEiJ_G0015009.1 mouse_genomes_project 4 158657276 158664387 - Gm13648 processed_transcript processed_transcript MGP_WSBEiJ_T0064286.1 MGP_WSBEiJ_G0027438.1 mouse_genomes_project 4 41324178 41333691 - MGP_WSBEiJ_P0064286 Fam221b protein_coding protein_coding MGP_WSBEiJ_T0064287.1 MGP_WSBEiJ_G0027438.1 mouse_genomes_project 4 41327652 41333695 - Fam221b protein_coding retained_intron MGP_WSBEiJ_T0004460.1 MGP_WSBEiJ_G0003874.1 mouse_genomes_project 4 128850473 128852420 + Hmgb4os antisense antisense MGP_WSBEiJ_T0068382.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154750789 154815398 - MGP_WSBEiJ_P0068382 Kcnab2 protein_coding protein_coding MGP_WSBEiJ_T0068383.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154750791 154846131 - MGP_WSBEiJ_P0068383 Kcnab2 protein_coding protein_coding MGP_WSBEiJ_T0068384.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154750792 154845785 - MGP_WSBEiJ_P0068384 Kcnab2 protein_coding protein_coding MGP_WSBEiJ_T0068385.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154752800 154845693 - MGP_WSBEiJ_P0068385 Kcnab2 protein_coding protein_coding MGP_WSBEiJ_T0068386.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154752861 154815398 - MGP_WSBEiJ_P0068386 Kcnab2 protein_coding protein_coding MGP_WSBEiJ_T0068387.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154755067 154787346 - Kcnab2 protein_coding processed_transcript MGP_WSBEiJ_T0068388.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154762768 154795236 - Kcnab2 protein_coding processed_transcript MGP_WSBEiJ_T0068389.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154763683 154823096 - MGP_WSBEiJ_P0068389 Kcnab2 protein_coding protein_coding MGP_WSBEiJ_T0068390.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154764790 154815299 - Kcnab2 protein_coding processed_transcript MGP_WSBEiJ_T0068391.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154776453 154845804 - Kcnab2 protein_coding retained_intron MGP_WSBEiJ_T0068392.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154776607 154790436 - Kcnab2 protein_coding processed_transcript MGP_WSBEiJ_T0068393.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154777437 154783014 - Kcnab2 protein_coding processed_transcript MGP_WSBEiJ_T0068394.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154791005 154815299 - Kcnab2 protein_coding processed_transcript MGP_WSBEiJ_T0068395.1 MGP_WSBEiJ_G0028377.1 mouse_genomes_project 4 154799908 154845755 - MGP_WSBEiJ_P0068395 Kcnab2 protein_coding protein_coding MGP_WSBEiJ_T0066893.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130316199 130317341 - Ccdc28b protein_coding processed_transcript MGP_WSBEiJ_T0066894.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130316199 130320673 - MGP_WSBEiJ_P0066894 Ccdc28b protein_coding protein_coding MGP_WSBEiJ_T0066895.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130316200 130317664 - Ccdc28b protein_coding retained_intron MGP_WSBEiJ_T0066896.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130316201 130318170 - Ccdc28b protein_coding processed_transcript MGP_WSBEiJ_T0066897.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130316201 130320563 - MGP_WSBEiJ_P0066897 Ccdc28b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066898.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130317224 130320604 - MGP_WSBEiJ_P0066898 Ccdc28b protein_coding protein_coding MGP_WSBEiJ_T0066899.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130317497 130319451 - Ccdc28b protein_coding processed_transcript MGP_WSBEiJ_T0066900.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130317751 130320612 - MGP_WSBEiJ_P0066900 Ccdc28b protein_coding protein_coding MGP_WSBEiJ_T0066901.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130318903 130320570 - Ccdc28b protein_coding retained_intron MGP_WSBEiJ_T0066902.1 MGP_WSBEiJ_G0028043.1 mouse_genomes_project 4 130320025 130320625 - Ccdc28b protein_coding retained_intron MGP_WSBEiJ_T0068348.1 MGP_WSBEiJ_G0028371.1 mouse_genomes_project 4 154623186 154636417 + MGP_WSBEiJ_P0068348 Gpr153 protein_coding protein_coding MGP_WSBEiJ_T0068349.1 MGP_WSBEiJ_G0028371.1 mouse_genomes_project 4 154623316 154636417 + MGP_WSBEiJ_P0068349 Gpr153 protein_coding protein_coding MGP_WSBEiJ_T0068350.1 MGP_WSBEiJ_G0028371.1 mouse_genomes_project 4 154630087 154636417 + MGP_WSBEiJ_P0068350 Gpr153 protein_coding protein_coding MGP_WSBEiJ_T0068351.1 MGP_WSBEiJ_G0028371.1 mouse_genomes_project 4 154633445 154636416 + Gpr153 protein_coding processed_transcript MGP_WSBEiJ_T0007837.1 MGP_WSBEiJ_G0006406.1 mouse_genomes_project 4 129242088 129243065 + Gm12958 lincRNA lincRNA MGP_WSBEiJ_T0067458.1 MGP_WSBEiJ_G0028159.1 mouse_genomes_project 4 136969057 136995435 + MGP_WSBEiJ_P0067458 Cnr2 protein_coding protein_coding MGP_WSBEiJ_T0067459.1 MGP_WSBEiJ_G0028159.1 mouse_genomes_project 4 136987037 136995435 + MGP_WSBEiJ_P0067459 Cnr2 protein_coding protein_coding MGP_WSBEiJ_T0065413.1 MGP_WSBEiJ_G0027715.1 mouse_genomes_project 4 102624237 102629959 - MGP_WSBEiJ_P0065413 Insl5 protein_coding protein_coding MGP_WSBEiJ_T0065414.1 MGP_WSBEiJ_G0027715.1 mouse_genomes_project 4 102624479 102630064 - MGP_WSBEiJ_P0065414 Insl5 protein_coding protein_coding MGP_WSBEiJ_T0064803.1 MGP_WSBEiJ_G0027569.1 mouse_genomes_project 4 60964455 60981704 + MGP_WSBEiJ_P0064803 Bspry protein_coding protein_coding MGP_WSBEiJ_T0064804.1 MGP_WSBEiJ_G0027569.1 mouse_genomes_project 4 60964455 60981704 + MGP_WSBEiJ_P0064804 Bspry protein_coding protein_coding MGP_WSBEiJ_T0064805.1 MGP_WSBEiJ_G0027569.1 mouse_genomes_project 4 60964491 60970837 + MGP_WSBEiJ_P0064805 Bspry protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068224.1 MGP_WSBEiJ_G0028349.1 mouse_genomes_project 4 152470358 152829980 + MGP_WSBEiJ_P0068224 Rere protein_coding protein_coding MGP_WSBEiJ_T0068225.1 MGP_WSBEiJ_G0028349.1 mouse_genomes_project 4 152470524 152471179 + Rere protein_coding processed_transcript MGP_WSBEiJ_T0068226.1 MGP_WSBEiJ_G0028349.1 mouse_genomes_project 4 152592584 152827652 + MGP_WSBEiJ_P0068226 Rere protein_coding unknown_likely_coding MGP_WSBEiJ_T0068227.1 MGP_WSBEiJ_G0028349.1 mouse_genomes_project 4 152601258 152668309 + MGP_WSBEiJ_P0068227 Rere protein_coding protein_coding MGP_WSBEiJ_T0068228.1 MGP_WSBEiJ_G0028349.1 mouse_genomes_project 4 152687491 152829976 + MGP_WSBEiJ_P0068228 Rere protein_coding protein_coding MGP_WSBEiJ_T0068229.1 MGP_WSBEiJ_G0028349.1 mouse_genomes_project 4 152775656 152776569 + Rere protein_coding processed_transcript MGP_WSBEiJ_T0068230.1 MGP_WSBEiJ_G0028349.1 mouse_genomes_project 4 152775725 152820228 + Rere protein_coding processed_transcript MGP_WSBEiJ_T0068231.1 MGP_WSBEiJ_G0028349.1 mouse_genomes_project 4 152825428 152827991 + MGP_WSBEiJ_P0068231 Rere protein_coding protein_coding MGP_WSBEiJ_T0098272.1 MGP_WSBEiJ_G0036935.1 mouse_genomes_project 4 99411498 99411580 + Gm26425 snRNA snRNA MGP_WSBEiJ_T0064905.1 MGP_WSBEiJ_G0027596.1 mouse_genomes_project 4 69142738 69254361 - MGP_WSBEiJ_P0064905 Megf9 protein_coding protein_coding MGP_WSBEiJ_T0064906.1 MGP_WSBEiJ_G0027596.1 mouse_genomes_project 4 69178621 69254428 - MGP_WSBEiJ_P0064906 Megf9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014027.1 MGP_WSBEiJ_G0012157.1 mouse_genomes_project 4 12910439 12910569 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063581.1 MGP_WSBEiJ_G0027281.1 mouse_genomes_project 4 7868723 7871333 + Ccne2 protein_coding processed_transcript MGP_WSBEiJ_T0063582.1 MGP_WSBEiJ_G0027281.1 mouse_genomes_project 4 7868726 7882043 + MGP_WSBEiJ_P0063582 Ccne2 protein_coding protein_coding MGP_WSBEiJ_T0063583.1 MGP_WSBEiJ_G0027281.1 mouse_genomes_project 4 7869081 7872532 + Ccne2 protein_coding processed_transcript MGP_WSBEiJ_T0063584.1 MGP_WSBEiJ_G0027281.1 mouse_genomes_project 4 7869098 7882142 + MGP_WSBEiJ_P0063584 Ccne2 protein_coding protein_coding MGP_WSBEiJ_T0063585.1 MGP_WSBEiJ_G0027281.1 mouse_genomes_project 4 7869102 7882050 + MGP_WSBEiJ_P0063585 Ccne2 protein_coding protein_coding MGP_WSBEiJ_T0063586.1 MGP_WSBEiJ_G0027281.1 mouse_genomes_project 4 7869108 7872414 + Ccne2 protein_coding processed_transcript MGP_WSBEiJ_T0063587.1 MGP_WSBEiJ_G0027281.1 mouse_genomes_project 4 7869967 7870607 + Ccne2 protein_coding processed_transcript MGP_WSBEiJ_T0014348.1 MGP_WSBEiJ_G0012478.1 mouse_genomes_project 4 127308908 127309926 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068311.1 MGP_WSBEiJ_G0028366.1 mouse_genomes_project 4 154411312 154440539 + MGP_WSBEiJ_P0068311 Plekhg5 protein_coding protein_coding MGP_WSBEiJ_T0068312.1 MGP_WSBEiJ_G0028366.1 mouse_genomes_project 4 154422383 154441100 + MGP_WSBEiJ_P0068312 Plekhg5 protein_coding protein_coding MGP_WSBEiJ_T0068313.1 MGP_WSBEiJ_G0028366.1 mouse_genomes_project 4 154422383 154441090 + MGP_WSBEiJ_P0068313 Plekhg5 protein_coding protein_coding MGP_WSBEiJ_T0068314.1 MGP_WSBEiJ_G0028366.1 mouse_genomes_project 4 154430203 154431897 + Plekhg5 protein_coding retained_intron MGP_WSBEiJ_T0068315.1 MGP_WSBEiJ_G0028366.1 mouse_genomes_project 4 154433440 154441094 + Plekhg5 protein_coding retained_intron MGP_WSBEiJ_T0068316.1 MGP_WSBEiJ_G0028366.1 mouse_genomes_project 4 154433533 154434014 + Plekhg5 protein_coding retained_intron MGP_WSBEiJ_T0063562.1 MGP_WSBEiJ_G0027276.1 mouse_genomes_project 4 6490103 6508568 + MGP_WSBEiJ_P0063562 Gdf6 protein_coding protein_coding MGP_WSBEiJ_T0014176.1 MGP_WSBEiJ_G0012306.1 mouse_genomes_project 4 68654521 68655632 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068295.1 MGP_WSBEiJ_G0028362.1 mouse_genomes_project 4 154320838 154329700 + MGP_WSBEiJ_P0068295 Klhl21 protein_coding protein_coding MGP_WSBEiJ_T0007890.1 MGP_WSBEiJ_G0006447.1 mouse_genomes_project 4 143469212 143470539 + Gm29367 lincRNA lincRNA MGP_WSBEiJ_T0014149.1 MGP_WSBEiJ_G0012279.1 mouse_genomes_project 4 53565268 53565653 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007888.1 MGP_WSBEiJ_G0006445.1 mouse_genomes_project 4 142837815 142839195 + Gm13056 lincRNA lincRNA MGP_WSBEiJ_T0007899.1 MGP_WSBEiJ_G0006456.1 mouse_genomes_project 4 152880204 152893487 - Gm16079 lincRNA lincRNA MGP_WSBEiJ_T0007774.1 MGP_WSBEiJ_G0006361.1 mouse_genomes_project 4 93441169 93776322 - lincRNA lincRNA MGP_WSBEiJ_T0065129.1 MGP_WSBEiJ_G0027637.1 mouse_genomes_project 4 87809952 87810715 - MGP_WSBEiJ_P0065129 protein_coding protein_coding MGP_WSBEiJ_T0066568.1 MGP_WSBEiJ_G0027971.1 mouse_genomes_project 4 125429461 125439842 - MGP_WSBEiJ_P0066568 Dnali1 protein_coding protein_coding MGP_WSBEiJ_T0063948.1 MGP_WSBEiJ_G0027373.1 mouse_genomes_project 4 37727899 37738125 - MGP_WSBEiJ_P0063948 Ndufb6 protein_coding protein_coding MGP_WSBEiJ_T0063949.1 MGP_WSBEiJ_G0027373.1 mouse_genomes_project 4 37727973 37738113 - MGP_WSBEiJ_P0063949 Ndufb6 protein_coding protein_coding MGP_WSBEiJ_T0066963.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130919288 130932287 - MGP_WSBEiJ_P0066963 Tinagl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066964.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130920436 130932287 - MGP_WSBEiJ_P0066964 Tinagl1 protein_coding protein_coding MGP_WSBEiJ_T0066965.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130920438 130921446 - Tinagl1 protein_coding retained_intron MGP_WSBEiJ_T0066966.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130920438 130932277 - MGP_WSBEiJ_P0066966 Tinagl1 protein_coding protein_coding MGP_WSBEiJ_T0066967.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130920553 130932607 - MGP_WSBEiJ_P0066967 Tinagl1 protein_coding protein_coding MGP_WSBEiJ_T0066968.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130921811 130924859 - Tinagl1 protein_coding retained_intron MGP_WSBEiJ_T0066969.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130924487 130932176 - MGP_WSBEiJ_P0066969 Tinagl1 protein_coding protein_coding MGP_WSBEiJ_T0066970.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130928884 130932277 - Tinagl1 protein_coding processed_transcript MGP_WSBEiJ_T0066971.1 MGP_WSBEiJ_G0028054.1 mouse_genomes_project 4 130931194 130932305 - Tinagl1 protein_coding retained_intron MGP_WSBEiJ_T0067460.1 MGP_WSBEiJ_G0028160.1 mouse_genomes_project 4 136995962 137015525 + MGP_WSBEiJ_P0067460 Fuca1 protein_coding protein_coding MGP_WSBEiJ_T0067461.1 MGP_WSBEiJ_G0028160.1 mouse_genomes_project 4 137005112 137009956 + Fuca1 protein_coding processed_transcript MGP_WSBEiJ_T0067462.1 MGP_WSBEiJ_G0028160.1 mouse_genomes_project 4 137008179 137014538 + Fuca1 protein_coding processed_transcript MGP_WSBEiJ_T0067463.1 MGP_WSBEiJ_G0028160.1 mouse_genomes_project 4 137008306 137010525 + Fuca1 protein_coding processed_transcript MGP_WSBEiJ_T0067464.1 MGP_WSBEiJ_G0028160.1 mouse_genomes_project 4 137011892 137014538 + Fuca1 protein_coding processed_transcript MGP_WSBEiJ_T0099570.1 MGP_WSBEiJ_G0038233.1 mouse_genomes_project 4 133074502 133074631 + Snora44 snoRNA snoRNA MGP_WSBEiJ_T0067688.1 MGP_WSBEiJ_G0028214.1 mouse_genomes_project 4 140259690 140278825 - MGP_WSBEiJ_P0067688 Otud3 protein_coding protein_coding MGP_WSBEiJ_T0014315.1 MGP_WSBEiJ_G0012445.1 mouse_genomes_project 4 118432167 118432375 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099499.1 MGP_WSBEiJ_G0038162.1 mouse_genomes_project 4 10834116 10834248 - Gm24068 snoRNA snoRNA MGP_WSBEiJ_T0068114.1 MGP_WSBEiJ_G0028328.1 mouse_genomes_project 4 151209349 151228310 + MGP_WSBEiJ_P0068114 Dffa protein_coding protein_coding MGP_WSBEiJ_T0068115.1 MGP_WSBEiJ_G0028328.1 mouse_genomes_project 4 151209349 151224505 + MGP_WSBEiJ_P0068115 Dffa protein_coding protein_coding MGP_WSBEiJ_T0068116.1 MGP_WSBEiJ_G0028328.1 mouse_genomes_project 4 151212916 151213387 + Dffa protein_coding processed_transcript MGP_WSBEiJ_T0068440.1 MGP_WSBEiJ_G0028386.1 mouse_genomes_project 4 156525569 156578297 - MGP_WSBEiJ_P0068440 Trp73 protein_coding protein_coding MGP_WSBEiJ_T0068441.1 MGP_WSBEiJ_G0028386.1 mouse_genomes_project 4 156525576 156570585 - MGP_WSBEiJ_P0068441 Trp73 protein_coding protein_coding MGP_WSBEiJ_T0068442.1 MGP_WSBEiJ_G0028386.1 mouse_genomes_project 4 156527835 156570585 - MGP_WSBEiJ_P0068442 Trp73 protein_coding protein_coding MGP_WSBEiJ_T0068443.1 MGP_WSBEiJ_G0028386.1 mouse_genomes_project 4 156528312 156570579 - MGP_WSBEiJ_P0068443 Trp73 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068444.1 MGP_WSBEiJ_G0028386.1 mouse_genomes_project 4 156535516 156558756 - MGP_WSBEiJ_P0068444 Trp73 protein_coding protein_coding MGP_WSBEiJ_T0068445.1 MGP_WSBEiJ_G0028386.1 mouse_genomes_project 4 156538765 156591150 - MGP_WSBEiJ_P0068445 Trp73 protein_coding protein_coding MGP_WSBEiJ_T0007706.1 MGP_WSBEiJ_G0006303.1 mouse_genomes_project 4 34627827 34719439 + Gm12374 lincRNA lincRNA MGP_WSBEiJ_T0100828.1 MGP_WSBEiJ_G0039286.1 mouse_genomes_project 4 112183404 112184451 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0067106.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323075 133333898 + MGP_WSBEiJ_P0067106 Dnajc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067107.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323075 133340804 + MGP_WSBEiJ_P0067107 Dnajc8 protein_coding protein_coding MGP_WSBEiJ_T0067108.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323092 133340723 + Dnajc8 protein_coding retained_intron MGP_WSBEiJ_T0067109.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323101 133331448 + MGP_WSBEiJ_P0067109 Dnajc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067110.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323102 133340256 + MGP_WSBEiJ_P0067110 Dnajc8 protein_coding protein_coding MGP_WSBEiJ_T0067111.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323106 133340279 + MGP_WSBEiJ_P0067111 Dnajc8 protein_coding protein_coding MGP_WSBEiJ_T0067112.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323106 133337683 + MGP_WSBEiJ_P0067112 Dnajc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067113.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323165 133340198 + MGP_WSBEiJ_P0067113 Dnajc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067114.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323184 133340517 + MGP_WSBEiJ_P0067114 Dnajc8 protein_coding protein_coding MGP_WSBEiJ_T0067115.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133323553 133331869 + Dnajc8 protein_coding retained_intron MGP_WSBEiJ_T0067116.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133333910 133340253 + MGP_WSBEiJ_P0067116 Dnajc8 protein_coding protein_coding MGP_WSBEiJ_T0067117.1 MGP_WSBEiJ_G0028083.1 mouse_genomes_project 4 133338372 133340502 + Dnajc8 protein_coding retained_intron MGP_WSBEiJ_T0007852.1 MGP_WSBEiJ_G0006416.1 mouse_genomes_project 4 131625275 131650971 + Gm12973 lincRNA lincRNA MGP_WSBEiJ_T0007897.1 MGP_WSBEiJ_G0006454.1 mouse_genomes_project 4 152213970 152221910 + Gm13067 lincRNA lincRNA MGP_WSBEiJ_T0064678.1 MGP_WSBEiJ_G0027534.1 mouse_genomes_project 4 55721606 56012928 + MGP_WSBEiJ_P0064678 Palm2 protein_coding protein_coding MGP_WSBEiJ_T0064679.1 MGP_WSBEiJ_G0027534.1 mouse_genomes_project 4 55858158 56012714 + MGP_WSBEiJ_P0064679 Palm2 protein_coding protein_coding MGP_WSBEiJ_T0064681.1 MGP_WSBEiJ_G0027534.1 mouse_genomes_project 4 55858320 56011154 + MGP_WSBEiJ_P0064681 Palm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064683.1 MGP_WSBEiJ_G0027534.1 mouse_genomes_project 4 55933195 56010414 + Palm2 protein_coding retained_intron MGP_WSBEiJ_T0063852.1 MGP_WSBEiJ_G0027350.1 mouse_genomes_project 4 30402259 30428137 + MGP_WSBEiJ_P0063852 Srsf12 protein_coding protein_coding MGP_WSBEiJ_T0063853.1 MGP_WSBEiJ_G0027350.1 mouse_genomes_project 4 30402574 30428147 + MGP_WSBEiJ_P0063853 Srsf12 protein_coding protein_coding MGP_WSBEiJ_T0065894.1 MGP_WSBEiJ_G0027811.1 mouse_genomes_project 4 115203605 115235920 + MGP_WSBEiJ_P0065894 Cyp4a30b protein_coding protein_coding MGP_WSBEiJ_T0099531.1 MGP_WSBEiJ_G0038194.1 mouse_genomes_project 4 63027917 63028046 + Gm23950 snoRNA snoRNA MGP_WSBEiJ_T0066350.1 MGP_WSBEiJ_G0027910.1 mouse_genomes_project 4 119592476 119602502 - MGP_WSBEiJ_P0066350 AA415398 protein_coding protein_coding MGP_WSBEiJ_T0066351.1 MGP_WSBEiJ_G0027910.1 mouse_genomes_project 4 119593607 119598968 - AA415398 protein_coding processed_transcript MGP_WSBEiJ_T0066352.1 MGP_WSBEiJ_G0027910.1 mouse_genomes_project 4 119593834 119602867 - AA415398 protein_coding processed_transcript MGP_WSBEiJ_T0066353.1 MGP_WSBEiJ_G0027910.1 mouse_genomes_project 4 119597266 119603266 - AA415398 protein_coding processed_transcript MGP_WSBEiJ_T0017461.1 MGP_WSBEiJ_G0014971.1 mouse_genomes_project 4 62554416 62737290 + 8030451A03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017462.1 MGP_WSBEiJ_G0014971.1 mouse_genomes_project 4 62554505 62625484 + 8030451A03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017463.1 MGP_WSBEiJ_G0014971.1 mouse_genomes_project 4 62554522 62557901 + 8030451A03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017464.1 MGP_WSBEiJ_G0014971.1 mouse_genomes_project 4 62735919 62736311 + 8030451A03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0067134.1 MGP_WSBEiJ_G0028087.1 mouse_genomes_project 4 133528618 133553632 - MGP_WSBEiJ_P0067134 Smpdl3b protein_coding protein_coding MGP_WSBEiJ_T0066007.1 MGP_WSBEiJ_G0027835.1 mouse_genomes_project 4 116414175 116418503 - MGP_WSBEiJ_P0066007 Tmem69 protein_coding protein_coding MGP_WSBEiJ_T0066008.1 MGP_WSBEiJ_G0027835.1 mouse_genomes_project 4 116414447 116415682 - Tmem69 protein_coding processed_transcript MGP_WSBEiJ_T0066009.1 MGP_WSBEiJ_G0027835.1 mouse_genomes_project 4 116415521 116418502 - MGP_WSBEiJ_P0066009 Tmem69 protein_coding protein_coding MGP_WSBEiJ_T0011386.1 MGP_WSBEiJ_G0009543.1 mouse_genomes_project 4 145062663 145062971 + Gm26313 misc_RNA misc_RNA MGP_WSBEiJ_T0064391.1 MGP_WSBEiJ_G0027457.1 mouse_genomes_project 4 42943916 43025425 + MGP_WSBEiJ_P0064391 Frmpd1 protein_coding protein_coding MGP_WSBEiJ_T0064392.1 MGP_WSBEiJ_G0027457.1 mouse_genomes_project 4 42943947 43049233 + MGP_WSBEiJ_P0064392 Frmpd1 protein_coding protein_coding MGP_WSBEiJ_T0064393.1 MGP_WSBEiJ_G0027457.1 mouse_genomes_project 4 42963785 43049233 + MGP_WSBEiJ_P0064393 Frmpd1 protein_coding protein_coding MGP_WSBEiJ_T0014397.1 MGP_WSBEiJ_G0012527.1 mouse_genomes_project 4 150631964 150632785 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014156.1 MGP_WSBEiJ_G0012286.1 mouse_genomes_project 4 56820748 56821322 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014229.1 MGP_WSBEiJ_G0012359.1 mouse_genomes_project 4 89664290 89665995 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065201.1 MGP_WSBEiJ_G0027668.1 mouse_genomes_project 4 94403722 94406911 - MGP_WSBEiJ_P0065201 Jun protein_coding protein_coding MGP_WSBEiJ_T0066592.1 MGP_WSBEiJ_G0027979.1 mouse_genomes_project 4 126537198 126539160 + MGP_WSBEiJ_P0066592 Lsm10 protein_coding protein_coding MGP_WSBEiJ_T0066593.1 MGP_WSBEiJ_G0027979.1 mouse_genomes_project 4 126537228 126539157 + MGP_WSBEiJ_P0066593 Lsm10 protein_coding protein_coding MGP_WSBEiJ_T0066594.1 MGP_WSBEiJ_G0027979.1 mouse_genomes_project 4 126537235 126538708 + MGP_WSBEiJ_P0066594 Lsm10 protein_coding protein_coding MGP_WSBEiJ_T0014042.1 MGP_WSBEiJ_G0012172.1 mouse_genomes_project 4 18497885 18498154 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004387.1 MGP_WSBEiJ_G0003822.1 mouse_genomes_project 4 72990365 72991764 - A230083N12Rik antisense antisense MGP_WSBEiJ_T0063620.1 MGP_WSBEiJ_G0027288.1 mouse_genomes_project 4 8412229 8422527 + MGP_WSBEiJ_P0063620 Gem protein_coding protein_coding MGP_WSBEiJ_T0063621.1 MGP_WSBEiJ_G0027288.1 mouse_genomes_project 4 8413580 8422527 + MGP_WSBEiJ_P0063621 Gem protein_coding protein_coding MGP_WSBEiJ_T0065899.1 MGP_WSBEiJ_G0027814.1 mouse_genomes_project 4 115431249 115456522 - MGP_WSBEiJ_P0065899 Cyp4b1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065900.1 MGP_WSBEiJ_G0027814.1 mouse_genomes_project 4 115431249 115456526 - MGP_WSBEiJ_P0065900 Cyp4b1 protein_coding protein_coding MGP_WSBEiJ_T0065901.1 MGP_WSBEiJ_G0027814.1 mouse_genomes_project 4 115436056 115439044 - Cyp4b1 protein_coding retained_intron MGP_WSBEiJ_T0063482.1 MGP_WSBEiJ_G0027261.1 mouse_genomes_project 4 656735 670929 - MGP_WSBEiJ_P0063482 Sdr16c5 protein_coding protein_coding MGP_WSBEiJ_T0063483.1 MGP_WSBEiJ_G0027261.1 mouse_genomes_project 4 663602 667887 - Sdr16c5 protein_coding processed_transcript MGP_WSBEiJ_T0065865.1 MGP_WSBEiJ_G0027799.1 mouse_genomes_project 4 114066896 114282228 + MGP_WSBEiJ_P0065865 Trabd2b protein_coding protein_coding MGP_WSBEiJ_T0004353.1 MGP_WSBEiJ_G0003793.1 mouse_genomes_project 4 17205164 17209275 + Gm11872 antisense antisense MGP_WSBEiJ_T0064691.1 MGP_WSBEiJ_G0027539.1 mouse_genomes_project 4 56304149 56329577 - Txndc8 protein_coding processed_transcript MGP_WSBEiJ_T0064692.1 MGP_WSBEiJ_G0027539.1 mouse_genomes_project 4 56304149 56329676 - MGP_WSBEiJ_P0064692 Txndc8 protein_coding protein_coding MGP_WSBEiJ_T0064693.1 MGP_WSBEiJ_G0027539.1 mouse_genomes_project 4 56304151 56320886 - MGP_WSBEiJ_P0064693 Txndc8 protein_coding protein_coding MGP_WSBEiJ_T0066114.1 MGP_WSBEiJ_G0027856.1 mouse_genomes_project 4 117070145 117105854 - MGP_WSBEiJ_P0066114 Kif2c protein_coding protein_coding MGP_WSBEiJ_T0066115.1 MGP_WSBEiJ_G0027856.1 mouse_genomes_project 4 117070637 117092045 - MGP_WSBEiJ_P0066115 Kif2c protein_coding protein_coding MGP_WSBEiJ_T0066116.1 MGP_WSBEiJ_G0027856.1 mouse_genomes_project 4 117077987 117078721 - Kif2c protein_coding retained_intron MGP_WSBEiJ_T0066117.1 MGP_WSBEiJ_G0027856.1 mouse_genomes_project 4 117086961 117105757 - Kif2c protein_coding retained_intron MGP_WSBEiJ_T0066118.1 MGP_WSBEiJ_G0027856.1 mouse_genomes_project 4 117086963 117105821 - Kif2c protein_coding processed_transcript MGP_WSBEiJ_T0066119.1 MGP_WSBEiJ_G0027856.1 mouse_genomes_project 4 117087706 117105807 - Kif2c protein_coding retained_intron MGP_WSBEiJ_T0066120.1 MGP_WSBEiJ_G0027856.1 mouse_genomes_project 4 117088241 117092027 - Kif2c protein_coding processed_transcript MGP_WSBEiJ_T0066121.1 MGP_WSBEiJ_G0027856.1 mouse_genomes_project 4 117088284 117092043 - MGP_WSBEiJ_P0066121 Kif2c protein_coding protein_coding MGP_WSBEiJ_T0004450.1 MGP_WSBEiJ_G0003866.1 mouse_genomes_project 4 124140661 124167156 - 1700121C08Rik antisense antisense MGP_WSBEiJ_T0066981.1 MGP_WSBEiJ_G0028059.1 mouse_genomes_project 4 131089776 131134385 - MGP_WSBEiJ_P0066981 Zcchc17 protein_coding protein_coding MGP_WSBEiJ_T0066982.1 MGP_WSBEiJ_G0028059.1 mouse_genomes_project 4 131090672 131093133 - Zcchc17 protein_coding processed_transcript MGP_WSBEiJ_T0066983.1 MGP_WSBEiJ_G0028059.1 mouse_genomes_project 4 131091088 131118757 - Zcchc17 protein_coding processed_transcript MGP_WSBEiJ_T0066984.1 MGP_WSBEiJ_G0028059.1 mouse_genomes_project 4 131111013 131112734 - Zcchc17 protein_coding processed_transcript MGP_WSBEiJ_T0066985.1 MGP_WSBEiJ_G0028059.1 mouse_genomes_project 4 131126687 131134358 - Zcchc17 protein_coding retained_intron MGP_WSBEiJ_T0099530.1 MGP_WSBEiJ_G0038193.1 mouse_genomes_project 4 61439348 61439482 + Gm25391 snoRNA snoRNA MGP_WSBEiJ_T0098319.1 MGP_WSBEiJ_G0036982.1 mouse_genomes_project 4 158622923 158623024 - Gm25982 snRNA snRNA MGP_WSBEiJ_T0068636.1 MGP_WSBEiJ_G0028420.1 mouse_genomes_project 4 158357583 158364134 - MGP_WSBEiJ_P0068636 Vwa1 protein_coding protein_coding MGP_WSBEiJ_T0097389.1 MGP_WSBEiJ_G0036063.1 mouse_genomes_project 4 57514973 57517360 - Gm12594 sense_intronic sense_intronic MGP_WSBEiJ_T0014069.1 MGP_WSBEiJ_G0012199.1 mouse_genomes_project 4 25647600 25648518 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067311.1 MGP_WSBEiJ_G0028125.1 mouse_genomes_project 4 135188800 135191107 - MGP_WSBEiJ_P0067311 Zfp593 protein_coding protein_coding MGP_WSBEiJ_T0067312.1 MGP_WSBEiJ_G0028125.1 mouse_genomes_project 4 135188818 135191057 - Zfp593 protein_coding processed_transcript MGP_WSBEiJ_T0000315.1 MGP_WSBEiJ_G0000263.1 mouse_genomes_project 4 90377921 90377987 + Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0014227.1 MGP_WSBEiJ_G0012357.1 mouse_genomes_project 4 88467683 88468176 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068207.1 MGP_WSBEiJ_G0028346.1 mouse_genomes_project 4 152319684 152347034 + MGP_WSBEiJ_P0068207 Slc2a7 protein_coding protein_coding MGP_WSBEiJ_T0068208.1 MGP_WSBEiJ_G0028346.1 mouse_genomes_project 4 152330296 152331169 + Slc2a7 protein_coding retained_intron MGP_WSBEiJ_T0004360.1 MGP_WSBEiJ_G0003798.1 mouse_genomes_project 4 36861770 36917350 - Gm17094 antisense antisense MGP_WSBEiJ_T0067911.1 MGP_WSBEiJ_G0028269.1 mouse_genomes_project 4 143451690 143468426 - MGP_WSBEiJ_P0067911 Efhd2 protein_coding protein_coding MGP_WSBEiJ_T0099494.1 MGP_WSBEiJ_G0038157.1 mouse_genomes_project 4 498069 498206 - Gm24125 snoRNA snoRNA MGP_WSBEiJ_T0063972.1 MGP_WSBEiJ_G0027378.1 mouse_genomes_project 4 38257948 38312262 - MGP_WSBEiJ_P0063972 B4galt1 protein_coding protein_coding MGP_WSBEiJ_T0063973.1 MGP_WSBEiJ_G0027378.1 mouse_genomes_project 4 38262500 38312262 - MGP_WSBEiJ_P0063973 B4galt1 protein_coding protein_coding MGP_WSBEiJ_T0004480.1 MGP_WSBEiJ_G0003891.1 mouse_genomes_project 4 139145762 139147353 - Gm13012 antisense antisense MGP_WSBEiJ_T0004481.1 MGP_WSBEiJ_G0003891.1 mouse_genomes_project 4 139145762 139146828 - Gm13012 antisense antisense MGP_WSBEiJ_T0004482.1 MGP_WSBEiJ_G0003891.1 mouse_genomes_project 4 139145762 139147342 - Gm13012 antisense antisense MGP_WSBEiJ_T0097055.1 MGP_WSBEiJ_G0035736.1 mouse_genomes_project 4 81457459 81457564 + n-R5s188 rRNA rRNA MGP_WSBEiJ_T0065529.1 MGP_WSBEiJ_G0027742.1 mouse_genomes_project 4 106827035 106837828 - MGP_WSBEiJ_P0065529 Mrpl37 protein_coding protein_coding MGP_WSBEiJ_T0065530.1 MGP_WSBEiJ_G0027742.1 mouse_genomes_project 4 106827046 106831112 - Mrpl37 protein_coding retained_intron MGP_WSBEiJ_T0065531.1 MGP_WSBEiJ_G0027742.1 mouse_genomes_project 4 106827129 106835730 - Mrpl37 protein_coding processed_transcript MGP_WSBEiJ_T0065532.1 MGP_WSBEiJ_G0027742.1 mouse_genomes_project 4 106827136 106837780 - Mrpl37 protein_coding processed_transcript MGP_WSBEiJ_T0065533.1 MGP_WSBEiJ_G0027742.1 mouse_genomes_project 4 106835355 106836317 - Mrpl37 protein_coding retained_intron MGP_WSBEiJ_T0067554.1 MGP_WSBEiJ_G0028183.1 mouse_genomes_project 4 138074741 138103202 - MGP_WSBEiJ_P0067554 Epha8 protein_coding protein_coding MGP_WSBEiJ_T0014256.1 MGP_WSBEiJ_G0012386.1 mouse_genomes_project 4 98909683 98909897 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063643.1 MGP_WSBEiJ_G0027295.1 mouse_genomes_project 4 8900005 8916382 - MGP_WSBEiJ_P0063643 Fam92a protein_coding protein_coding MGP_WSBEiJ_T0063644.1 MGP_WSBEiJ_G0027295.1 mouse_genomes_project 4 8900005 8916362 - MGP_WSBEiJ_P0063644 Fam92a protein_coding protein_coding MGP_WSBEiJ_T0063645.1 MGP_WSBEiJ_G0027295.1 mouse_genomes_project 4 8900067 8915535 - MGP_WSBEiJ_P0063645 Fam92a protein_coding protein_coding MGP_WSBEiJ_T0063646.1 MGP_WSBEiJ_G0027295.1 mouse_genomes_project 4 8908464 8916238 - MGP_WSBEiJ_P0063646 Fam92a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063647.1 MGP_WSBEiJ_G0027295.1 mouse_genomes_project 4 8909688 8916362 - Fam92a protein_coding retained_intron MGP_WSBEiJ_T0063648.1 MGP_WSBEiJ_G0027295.1 mouse_genomes_project 4 8909955 8916101 - Fam92a protein_coding retained_intron MGP_WSBEiJ_T0063577.1 MGP_WSBEiJ_G0027280.1 mouse_genomes_project 4 7834711 7853427 + MGP_WSBEiJ_P0063577 Trp53inp1 protein_coding protein_coding MGP_WSBEiJ_T0063578.1 MGP_WSBEiJ_G0027280.1 mouse_genomes_project 4 7834721 7853427 + Trp53inp1 protein_coding processed_transcript MGP_WSBEiJ_T0063579.1 MGP_WSBEiJ_G0027280.1 mouse_genomes_project 4 7834724 7845448 + Trp53inp1 protein_coding processed_transcript MGP_WSBEiJ_T0063580.1 MGP_WSBEiJ_G0027280.1 mouse_genomes_project 4 7843506 7847062 + Trp53inp1 protein_coding processed_transcript MGP_WSBEiJ_T0067742.1 MGP_WSBEiJ_G0028227.1 mouse_genomes_project 4 141019264 141082299 + MGP_WSBEiJ_P0067742 Gm21969 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014260.1 MGP_WSBEiJ_G0012390.1 mouse_genomes_project 4 99883000 99883698 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099528.1 MGP_WSBEiJ_G0038191.1 mouse_genomes_project 4 55164911 55165037 + Gm22300 snoRNA snoRNA MGP_WSBEiJ_T0007879.1 MGP_WSBEiJ_G0006437.1 mouse_genomes_project 4 141384728 141396216 + Gm13028 lincRNA lincRNA MGP_WSBEiJ_T0014289.1 MGP_WSBEiJ_G0012419.1 mouse_genomes_project 4 108796084 108796320 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066014.1 MGP_WSBEiJ_G0027837.1 mouse_genomes_project 4 116462306 116465854 + Ccdc17 protein_coding processed_transcript MGP_WSBEiJ_T0066015.1 MGP_WSBEiJ_G0027837.1 mouse_genomes_project 4 116462382 116465919 + MGP_WSBEiJ_P0066015 Ccdc17 protein_coding protein_coding MGP_WSBEiJ_T0066016.1 MGP_WSBEiJ_G0027837.1 mouse_genomes_project 4 116462455 116463853 + Ccdc17 protein_coding processed_transcript MGP_WSBEiJ_T0066017.1 MGP_WSBEiJ_G0027837.1 mouse_genomes_project 4 116463412 116465875 + Ccdc17 protein_coding processed_transcript MGP_WSBEiJ_T0066018.1 MGP_WSBEiJ_G0027837.1 mouse_genomes_project 4 116464144 116464817 + Ccdc17 protein_coding processed_transcript MGP_WSBEiJ_T0007827.1 MGP_WSBEiJ_G0006401.1 mouse_genomes_project 4 126308668 126344678 - 2610028E06Rik lincRNA lincRNA MGP_WSBEiJ_T0007828.1 MGP_WSBEiJ_G0006401.1 mouse_genomes_project 4 126308668 126321311 - 2610028E06Rik lincRNA lincRNA MGP_WSBEiJ_T0007829.1 MGP_WSBEiJ_G0006401.1 mouse_genomes_project 4 126309013 126344785 - 2610028E06Rik lincRNA lincRNA MGP_WSBEiJ_T0007830.1 MGP_WSBEiJ_G0006401.1 mouse_genomes_project 4 126311231 126339497 - 2610028E06Rik lincRNA lincRNA MGP_WSBEiJ_T0007831.1 MGP_WSBEiJ_G0006401.1 mouse_genomes_project 4 126340916 126344785 - 2610028E06Rik lincRNA lincRNA MGP_WSBEiJ_T0067895.1 MGP_WSBEiJ_G0028265.1 mouse_genomes_project 4 143354910 143385204 - MGP_WSBEiJ_P0067895 Dnajc16 protein_coding protein_coding MGP_WSBEiJ_T0067896.1 MGP_WSBEiJ_G0028265.1 mouse_genomes_project 4 143364509 143368963 - Dnajc16 protein_coding processed_transcript MGP_WSBEiJ_T0067897.1 MGP_WSBEiJ_G0028265.1 mouse_genomes_project 4 143377366 143385244 - MGP_WSBEiJ_P0067897 Dnajc16 protein_coding protein_coding MGP_WSBEiJ_T0007860.1 MGP_WSBEiJ_G0006422.1 mouse_genomes_project 4 133026433 133026591 + Gm28872 lincRNA lincRNA MGP_WSBEiJ_T0014050.1 MGP_WSBEiJ_G0012180.1 mouse_genomes_project 4 21103390 21104592 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014230.1 MGP_WSBEiJ_G0012360.1 mouse_genomes_project 4 89674625 89675617 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099572.1 MGP_WSBEiJ_G0038235.1 mouse_genomes_project 4 133075463 133075537 + Snord99 snoRNA snoRNA MGP_WSBEiJ_T0067937.1 MGP_WSBEiJ_G0028276.1 mouse_genomes_project 4 145124424 145130143 + MGP_WSBEiJ_P0067937 Pramel1 protein_coding protein_coding MGP_WSBEiJ_T0100842.1 MGP_WSBEiJ_G0039300.1 mouse_genomes_project 4 122943309 122947759 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099562.1 MGP_WSBEiJ_G0038225.1 mouse_genomes_project 4 127376835 127376968 - Gm25604 snoRNA snoRNA MGP_WSBEiJ_T0017458.1 MGP_WSBEiJ_G0014969.1 mouse_genomes_project 4 51326107 51338541 - 4930412L05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017459.1 MGP_WSBEiJ_G0014969.1 mouse_genomes_project 4 51335539 51338837 - 4930412L05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0007736.1 MGP_WSBEiJ_G0006328.1 mouse_genomes_project 4 54440446 54444310 - 2310081O03Rik lincRNA lincRNA MGP_WSBEiJ_T0000001.1 MGP_WSBEiJ_G0000001.1 mouse_genomes_project 4 117784226 117818510 - Gm17114 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_WSBEiJ_T0013996.1 MGP_WSBEiJ_G0012126.1 mouse_genomes_project 4 2695481 2696235 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007685.1 MGP_WSBEiJ_G0006283.1 mouse_genomes_project 4 8711721 8721285 - Gm11840 lincRNA lincRNA MGP_WSBEiJ_T0098312.1 MGP_WSBEiJ_G0036975.1 mouse_genomes_project 4 150499326 150499478 - Gm23303 snRNA snRNA MGP_WSBEiJ_T0068738.1 MGP_WSBEiJ_G0028440.1 mouse_genomes_project 4 158723398 158740995 + MGP_WSBEiJ_P0068738 9430015G10Rik protein_coding protein_coding MGP_WSBEiJ_T0068739.1 MGP_WSBEiJ_G0028440.1 mouse_genomes_project 4 158723401 158740995 + 9430015G10Rik protein_coding processed_transcript MGP_WSBEiJ_T0068740.1 MGP_WSBEiJ_G0028440.1 mouse_genomes_project 4 158723414 158740993 + MGP_WSBEiJ_P0068740 9430015G10Rik protein_coding protein_coding MGP_WSBEiJ_T0068741.1 MGP_WSBEiJ_G0028440.1 mouse_genomes_project 4 158723415 158739948 + MGP_WSBEiJ_P0068741 9430015G10Rik protein_coding protein_coding MGP_WSBEiJ_T0068742.1 MGP_WSBEiJ_G0028440.1 mouse_genomes_project 4 158723435 158735908 + 9430015G10Rik protein_coding processed_transcript MGP_WSBEiJ_T0068743.1 MGP_WSBEiJ_G0028440.1 mouse_genomes_project 4 158723455 158729868 + 9430015G10Rik protein_coding processed_transcript MGP_WSBEiJ_T0068744.1 MGP_WSBEiJ_G0028440.1 mouse_genomes_project 4 158727308 158733247 + 9430015G10Rik protein_coding processed_transcript MGP_WSBEiJ_T0014141.1 MGP_WSBEiJ_G0012271.1 mouse_genomes_project 4 52028240 52028644 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068294.1 MGP_WSBEiJ_G0028361.1 mouse_genomes_project 4 154300408 154307037 - MGP_WSBEiJ_P0068294 Phf13 protein_coding protein_coding MGP_WSBEiJ_T0004463.1 MGP_WSBEiJ_G0003877.1 mouse_genomes_project 4 130769513 130794195 - Gm12963 antisense antisense MGP_WSBEiJ_T0004464.1 MGP_WSBEiJ_G0003877.1 mouse_genomes_project 4 130773456 130794195 - Gm12963 antisense antisense MGP_WSBEiJ_T0004465.1 MGP_WSBEiJ_G0003877.1 mouse_genomes_project 4 130773460 130775061 - Gm12963 antisense antisense MGP_WSBEiJ_T0065127.1 MGP_WSBEiJ_G0027635.1 mouse_genomes_project 4 87799300 87799829 - MGP_WSBEiJ_P0065127 protein_coding protein_coding MGP_WSBEiJ_T0014272.1 MGP_WSBEiJ_G0012402.1 mouse_genomes_project 4 103585590 103586573 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098232.1 MGP_WSBEiJ_G0036895.1 mouse_genomes_project 4 5867671 5867777 + Gm23423 snRNA snRNA MGP_WSBEiJ_T0066604.1 MGP_WSBEiJ_G0027982.1 mouse_genomes_project 4 126600063 126612101 - Sh3d21 protein_coding processed_transcript MGP_WSBEiJ_T0066605.1 MGP_WSBEiJ_G0027982.1 mouse_genomes_project 4 126600063 126612062 - MGP_WSBEiJ_P0066605 Sh3d21 protein_coding protein_coding MGP_WSBEiJ_T0066606.1 MGP_WSBEiJ_G0027982.1 mouse_genomes_project 4 126600063 126612927 - MGP_WSBEiJ_P0066606 Sh3d21 protein_coding protein_coding MGP_WSBEiJ_T0066607.1 MGP_WSBEiJ_G0027982.1 mouse_genomes_project 4 126600069 126612037 - Sh3d21 protein_coding processed_transcript MGP_WSBEiJ_T0066608.1 MGP_WSBEiJ_G0027982.1 mouse_genomes_project 4 126601019 126612092 - Sh3d21 protein_coding processed_transcript MGP_WSBEiJ_T0004498.1 MGP_WSBEiJ_G0003905.1 mouse_genomes_project 4 143622557 143634819 + 4930455G09Rik antisense antisense MGP_WSBEiJ_T0065378.1 MGP_WSBEiJ_G0027709.1 mouse_genomes_project 4 101454998 101458724 - MGP_WSBEiJ_P0065378 C130073F10Rik protein_coding protein_coding MGP_WSBEiJ_T0066537.1 MGP_WSBEiJ_G0027963.1 mouse_genomes_project 4 125158180 125206228 + MGP_WSBEiJ_P0066537 Mtf1 protein_coding protein_coding MGP_WSBEiJ_T0066538.1 MGP_WSBEiJ_G0027963.1 mouse_genomes_project 4 125158625 125206649 + MGP_WSBEiJ_P0066538 Mtf1 protein_coding protein_coding MGP_WSBEiJ_T0066539.1 MGP_WSBEiJ_G0027963.1 mouse_genomes_project 4 125158625 125176065 + MGP_WSBEiJ_P0066539 Mtf1 protein_coding protein_coding MGP_WSBEiJ_T0066540.1 MGP_WSBEiJ_G0027963.1 mouse_genomes_project 4 125158658 125161422 + Mtf1 protein_coding retained_intron MGP_WSBEiJ_T0066541.1 MGP_WSBEiJ_G0027963.1 mouse_genomes_project 4 125158754 125160784 + MGP_WSBEiJ_P0066541 Mtf1 protein_coding protein_coding MGP_WSBEiJ_T0007865.1 MGP_WSBEiJ_G0006426.1 mouse_genomes_project 4 134719186 134720382 + Gm12974 lincRNA lincRNA MGP_WSBEiJ_T0063462.1 MGP_WSBEiJ_G0027258.1 mouse_genomes_project 4 512839 514287 - MGP_WSBEiJ_P0063462 Mos protein_coding protein_coding MGP_WSBEiJ_T0014264.1 MGP_WSBEiJ_G0012394.1 mouse_genomes_project 4 100880128 100880420 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066719.1 MGP_WSBEiJ_G0028007.1 mouse_genomes_project 4 127898589 127901585 - MGP_WSBEiJ_P0066719 Gjb4 protein_coding protein_coding MGP_WSBEiJ_T0066720.1 MGP_WSBEiJ_G0028007.1 mouse_genomes_project 4 127898589 127901585 - MGP_WSBEiJ_P0066720 Gjb4 protein_coding protein_coding MGP_WSBEiJ_T0065791.1 MGP_WSBEiJ_G0027787.1 mouse_genomes_project 4 109559747 109862749 + MGP_WSBEiJ_P0065791 Faf1 protein_coding protein_coding MGP_WSBEiJ_T0065792.1 MGP_WSBEiJ_G0027787.1 mouse_genomes_project 4 109560156 109568592 + Faf1 protein_coding processed_transcript MGP_WSBEiJ_T0065793.1 MGP_WSBEiJ_G0027787.1 mouse_genomes_project 4 109734685 109821368 + Faf1 protein_coding processed_transcript MGP_WSBEiJ_T0014389.1 MGP_WSBEiJ_G0012519.1 mouse_genomes_project 4 145475754 145481371 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004393.1 MGP_WSBEiJ_G0003828.1 mouse_genomes_project 4 87984492 87990361 - Gm13274 antisense antisense MGP_WSBEiJ_T0004394.1 MGP_WSBEiJ_G0003828.1 mouse_genomes_project 4 87984585 87990360 - Gm13274 antisense antisense MGP_WSBEiJ_T0065776.1 MGP_WSBEiJ_G0027783.1 mouse_genomes_project 4 109281655 109303943 + MGP_WSBEiJ_P0065776 Ttc39a protein_coding protein_coding MGP_WSBEiJ_T0065777.1 MGP_WSBEiJ_G0027783.1 mouse_genomes_project 4 109282117 109320474 + MGP_WSBEiJ_P0065777 Ttc39a protein_coding protein_coding MGP_WSBEiJ_T0065778.1 MGP_WSBEiJ_G0027783.1 mouse_genomes_project 4 109282140 109300051 + MGP_WSBEiJ_P0065778 Ttc39a protein_coding protein_coding MGP_WSBEiJ_T0065779.1 MGP_WSBEiJ_G0027783.1 mouse_genomes_project 4 109282159 109298763 + Ttc39a protein_coding processed_transcript MGP_WSBEiJ_T0065780.1 MGP_WSBEiJ_G0027783.1 mouse_genomes_project 4 109289799 109304011 + MGP_WSBEiJ_P0065780 Ttc39a protein_coding protein_coding MGP_WSBEiJ_T0065781.1 MGP_WSBEiJ_G0027783.1 mouse_genomes_project 4 109290631 109320111 + MGP_WSBEiJ_P0065781 Ttc39a protein_coding protein_coding MGP_WSBEiJ_T0065782.1 MGP_WSBEiJ_G0027783.1 mouse_genomes_project 4 109290757 109297198 + Ttc39a protein_coding processed_transcript MGP_WSBEiJ_T0065783.1 MGP_WSBEiJ_G0027783.1 mouse_genomes_project 4 109296762 109302178 + MGP_WSBEiJ_P0065783 Ttc39a protein_coding protein_coding MGP_WSBEiJ_T0066756.1 MGP_WSBEiJ_G0028017.1 mouse_genomes_project 4 129507313 129528386 + MGP_WSBEiJ_P0066756 Trim62 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066757.1 MGP_WSBEiJ_G0028017.1 mouse_genomes_project 4 129507321 129535983 + MGP_WSBEiJ_P0066757 Trim62 protein_coding protein_coding MGP_WSBEiJ_T0014028.1 MGP_WSBEiJ_G0012158.1 mouse_genomes_project 4 13044832 13045925 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004527.1 MGP_WSBEiJ_G0003926.1 mouse_genomes_project 4 156410974 156413844 - BC039966 antisense antisense MGP_WSBEiJ_T0067441.1 MGP_WSBEiJ_G0028155.1 mouse_genomes_project 4 136779283 136805885 + MGP_WSBEiJ_P0067441 Il22ra1 protein_coding protein_coding MGP_WSBEiJ_T0063602.1 MGP_WSBEiJ_G0027284.1 mouse_genomes_project 4 8018049 8074771 - MGP_WSBEiJ_P0063602 Esrp1 protein_coding protein_coding MGP_WSBEiJ_T0063603.1 MGP_WSBEiJ_G0027284.1 mouse_genomes_project 4 8018049 8074667 - MGP_WSBEiJ_P0063603 Esrp1 protein_coding protein_coding MGP_WSBEiJ_T0063604.1 MGP_WSBEiJ_G0027284.1 mouse_genomes_project 4 8018154 8074771 - MGP_WSBEiJ_P0063604 Esrp1 protein_coding protein_coding MGP_WSBEiJ_T0063605.1 MGP_WSBEiJ_G0027284.1 mouse_genomes_project 4 8019121 8055298 - MGP_WSBEiJ_P0063605 Esrp1 protein_coding protein_coding MGP_WSBEiJ_T0063606.1 MGP_WSBEiJ_G0027284.1 mouse_genomes_project 4 8019121 8074667 - MGP_WSBEiJ_P0063606 Esrp1 protein_coding protein_coding MGP_WSBEiJ_T0063607.1 MGP_WSBEiJ_G0027284.1 mouse_genomes_project 4 8026708 8030220 - Esrp1 protein_coding processed_transcript MGP_WSBEiJ_T0063608.1 MGP_WSBEiJ_G0027284.1 mouse_genomes_project 4 8045713 8074382 - MGP_WSBEiJ_P0063608 Esrp1 protein_coding protein_coding MGP_WSBEiJ_T0067442.1 MGP_WSBEiJ_G0028156.1 mouse_genomes_project 4 136813349 136875998 + MGP_WSBEiJ_P0067442 Myom3 protein_coding protein_coding MGP_WSBEiJ_T0067443.1 MGP_WSBEiJ_G0028156.1 mouse_genomes_project 4 136855368 136875998 + Myom3 protein_coding retained_intron MGP_WSBEiJ_T0067444.1 MGP_WSBEiJ_G0028156.1 mouse_genomes_project 4 136857795 136863853 + Myom3 protein_coding retained_intron MGP_WSBEiJ_T0014051.1 MGP_WSBEiJ_G0012181.1 mouse_genomes_project 4 21284610 21286326 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064294.1 MGP_WSBEiJ_G0027440.1 mouse_genomes_project 4 41359522 41366230 - MGP_WSBEiJ_P0064294 Olfr70 protein_coding protein_coding MGP_WSBEiJ_T0063652.1 MGP_WSBEiJ_G0027297.1 mouse_genomes_project 4 10495171 10651332 + MGP_WSBEiJ_P0063652 Runx1t1 protein_coding protein_coding MGP_WSBEiJ_T0063653.1 MGP_WSBEiJ_G0027297.1 mouse_genomes_project 4 10503060 10600153 + Runx1t1 protein_coding processed_transcript MGP_WSBEiJ_T0063654.1 MGP_WSBEiJ_G0027297.1 mouse_genomes_project 4 10503060 10651311 + MGP_WSBEiJ_P0063654 Runx1t1 protein_coding protein_coding MGP_WSBEiJ_T0063655.1 MGP_WSBEiJ_G0027297.1 mouse_genomes_project 4 10523977 10648007 + MGP_WSBEiJ_P0063655 Runx1t1 protein_coding protein_coding MGP_WSBEiJ_T0063656.1 MGP_WSBEiJ_G0027297.1 mouse_genomes_project 4 10538311 10648805 + MGP_WSBEiJ_P0063656 Runx1t1 protein_coding protein_coding MGP_WSBEiJ_T0063657.1 MGP_WSBEiJ_G0027297.1 mouse_genomes_project 4 10646903 10647646 + Runx1t1 protein_coding processed_transcript MGP_WSBEiJ_T0014267.1 MGP_WSBEiJ_G0012397.1 mouse_genomes_project 4 101437561 101438270 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064468.1 MGP_WSBEiJ_G0027476.1 mouse_genomes_project 4 44349874 44364269 + MGP_WSBEiJ_P0064468 Nans protein_coding protein_coding MGP_WSBEiJ_T0064469.1 MGP_WSBEiJ_G0027476.1 mouse_genomes_project 4 44349945 44355775 + Nans protein_coding processed_transcript MGP_WSBEiJ_T0064470.1 MGP_WSBEiJ_G0027476.1 mouse_genomes_project 4 44350000 44359724 + Nans protein_coding processed_transcript MGP_WSBEiJ_T0064471.1 MGP_WSBEiJ_G0027476.1 mouse_genomes_project 4 44350611 44361387 + Nans protein_coding processed_transcript MGP_WSBEiJ_T0066069.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116886312 116890574 - MGP_WSBEiJ_P0066069 Urod protein_coding protein_coding MGP_WSBEiJ_T0066070.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116886377 116887826 - Urod protein_coding retained_intron MGP_WSBEiJ_T0066071.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116886445 116888047 - Urod protein_coding retained_intron MGP_WSBEiJ_T0066072.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116887236 116890525 - Urod protein_coding retained_intron MGP_WSBEiJ_T0066073.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116887621 116890518 - MGP_WSBEiJ_P0066073 Urod protein_coding protein_coding MGP_WSBEiJ_T0066074.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116888444 116890507 - Urod protein_coding retained_intron MGP_WSBEiJ_T0066075.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116888944 116890506 - Urod protein_coding retained_intron MGP_WSBEiJ_T0066076.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116889113 116889758 - Urod protein_coding processed_transcript MGP_WSBEiJ_T0066077.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116889268 116890501 - Urod protein_coding retained_intron MGP_WSBEiJ_T0066078.1 MGP_WSBEiJ_G0027848.1 mouse_genomes_project 4 116889440 116890541 - Urod protein_coding retained_intron MGP_WSBEiJ_T0064806.1 MGP_WSBEiJ_G0027570.1 mouse_genomes_project 4 60983413 60986679 - MGP_WSBEiJ_P0064806 Hdhd3 protein_coding protein_coding MGP_WSBEiJ_T0064807.1 MGP_WSBEiJ_G0027570.1 mouse_genomes_project 4 60984348 60987870 - Hdhd3 protein_coding processed_transcript MGP_WSBEiJ_T0065957.1 MGP_WSBEiJ_G0027826.1 mouse_genomes_project 4 115911138 115934093 + MGP_WSBEiJ_P0065957 Lrrc41 protein_coding protein_coding MGP_WSBEiJ_T0065958.1 MGP_WSBEiJ_G0027826.1 mouse_genomes_project 4 115911332 115918899 + Lrrc41 protein_coding processed_transcript MGP_WSBEiJ_T0065959.1 MGP_WSBEiJ_G0027826.1 mouse_genomes_project 4 115911414 115924364 + Lrrc41 protein_coding processed_transcript MGP_WSBEiJ_T0065960.1 MGP_WSBEiJ_G0027826.1 mouse_genomes_project 4 115912754 115924433 + Lrrc41 protein_coding processed_transcript MGP_WSBEiJ_T0065961.1 MGP_WSBEiJ_G0027826.1 mouse_genomes_project 4 115915267 115918897 + Lrrc41 protein_coding processed_transcript MGP_WSBEiJ_T0065962.1 MGP_WSBEiJ_G0027826.1 mouse_genomes_project 4 115925316 115930387 + Lrrc41 protein_coding processed_transcript MGP_WSBEiJ_T0013992.1 MGP_WSBEiJ_G0012122.1 mouse_genomes_project 4 1168599 1169115 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099564.1 MGP_WSBEiJ_G0038227.1 mouse_genomes_project 4 131389466 131389549 + Gm24091 snoRNA snoRNA MGP_WSBEiJ_T0064166.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41027816 41074479 + MGP_WSBEiJ_P0064166 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064167.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41027894 41061768 + MGP_WSBEiJ_P0064167 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064168.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41027907 41063162 + Rusc2 protein_coding processed_transcript MGP_WSBEiJ_T0064169.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41029282 41061812 + MGP_WSBEiJ_P0064169 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064170.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41029343 41061727 + MGP_WSBEiJ_P0064170 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064171.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41030114 41069304 + Rusc2 protein_coding processed_transcript MGP_WSBEiJ_T0064172.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41030165 41061865 + MGP_WSBEiJ_P0064172 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064173.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41046912 41074464 + Rusc2 protein_coding retained_intron MGP_WSBEiJ_T0064174.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41046927 41061711 + MGP_WSBEiJ_P0064174 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064175.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41052142 41074479 + MGP_WSBEiJ_P0064175 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064176.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41052209 41069840 + Rusc2 protein_coding processed_transcript MGP_WSBEiJ_T0064177.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41052245 41074027 + MGP_WSBEiJ_P0064177 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064178.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41052264 41062151 + MGP_WSBEiJ_P0064178 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064179.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41061667 41074027 + MGP_WSBEiJ_P0064179 Rusc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064180.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41061667 41074479 + MGP_WSBEiJ_P0064180 Rusc2 protein_coding protein_coding MGP_WSBEiJ_T0064181.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41063409 41073743 + Rusc2 protein_coding processed_transcript MGP_WSBEiJ_T0064182.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41069876 41071758 + Rusc2 protein_coding retained_intron MGP_WSBEiJ_T0064183.1 MGP_WSBEiJ_G0027421.1 mouse_genomes_project 4 41070975 41071396 + Rusc2 protein_coding retained_intron MGP_WSBEiJ_T0064778.1 MGP_WSBEiJ_G0027563.1 mouse_genomes_project 4 60779597 60811164 - Fkbp15 protein_coding processed_transcript MGP_WSBEiJ_T0064779.1 MGP_WSBEiJ_G0027563.1 mouse_genomes_project 4 60779597 60840088 - MGP_WSBEiJ_P0064779 Fkbp15 protein_coding protein_coding MGP_WSBEiJ_T0064780.1 MGP_WSBEiJ_G0027563.1 mouse_genomes_project 4 60789680 60840166 - MGP_WSBEiJ_P0064780 Fkbp15 protein_coding protein_coding MGP_WSBEiJ_T0064781.1 MGP_WSBEiJ_G0027563.1 mouse_genomes_project 4 60797034 60840112 - MGP_WSBEiJ_P0064781 Fkbp15 protein_coding protein_coding MGP_WSBEiJ_T0064782.1 MGP_WSBEiJ_G0027563.1 mouse_genomes_project 4 60799054 60840152 - MGP_WSBEiJ_P0064782 Fkbp15 protein_coding protein_coding MGP_WSBEiJ_T0064783.1 MGP_WSBEiJ_G0027563.1 mouse_genomes_project 4 60823027 60840087 - Fkbp15 protein_coding processed_transcript MGP_WSBEiJ_T0007816.1 MGP_WSBEiJ_G0006394.1 mouse_genomes_project 4 124199924 124206150 - Gm26606 lincRNA lincRNA MGP_WSBEiJ_T0014309.1 MGP_WSBEiJ_G0012439.1 mouse_genomes_project 4 116911301 116911941 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014000.1 MGP_WSBEiJ_G0012130.1 mouse_genomes_project 4 3660446 3660914 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014254.1 MGP_WSBEiJ_G0012384.1 mouse_genomes_project 4 98381853 98388416 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068656.1 MGP_WSBEiJ_G0028426.1 mouse_genomes_project 4 158436145 158438593 + MGP_WSBEiJ_P0068656 Mxra8 protein_coding protein_coding MGP_WSBEiJ_T0068657.1 MGP_WSBEiJ_G0028426.1 mouse_genomes_project 4 158436191 158441520 + MGP_WSBEiJ_P0068657 Mxra8 protein_coding protein_coding MGP_WSBEiJ_T0068658.1 MGP_WSBEiJ_G0028426.1 mouse_genomes_project 4 158436295 158437744 + Mxra8 protein_coding retained_intron MGP_WSBEiJ_T0068659.1 MGP_WSBEiJ_G0028426.1 mouse_genomes_project 4 158438746 158440389 + Mxra8 protein_coding retained_intron MGP_WSBEiJ_T0068660.1 MGP_WSBEiJ_G0028426.1 mouse_genomes_project 4 158439865 158440889 + Mxra8 protein_coding retained_intron MGP_WSBEiJ_T0068661.1 MGP_WSBEiJ_G0028426.1 mouse_genomes_project 4 158439886 158441006 + Mxra8 protein_coding retained_intron MGP_WSBEiJ_T0068662.1 MGP_WSBEiJ_G0028426.1 mouse_genomes_project 4 158440337 158441197 + Mxra8 protein_coding processed_transcript MGP_WSBEiJ_T0007798.1 MGP_WSBEiJ_G0006380.1 mouse_genomes_project 4 107476866 107555893 + 1700047F07Rik lincRNA lincRNA MGP_WSBEiJ_T0007799.1 MGP_WSBEiJ_G0006380.1 mouse_genomes_project 4 107476898 107497128 + 1700047F07Rik lincRNA lincRNA MGP_WSBEiJ_T0007800.1 MGP_WSBEiJ_G0006380.1 mouse_genomes_project 4 107495574 107508545 + 1700047F07Rik lincRNA lincRNA MGP_WSBEiJ_T0007801.1 MGP_WSBEiJ_G0006380.1 mouse_genomes_project 4 107495597 107497185 + 1700047F07Rik lincRNA lincRNA MGP_WSBEiJ_T0067543.1 MGP_WSBEiJ_G0028178.1 mouse_genomes_project 4 137746049 137767712 + MGP_WSBEiJ_P0067543 Lactbl1 protein_coding protein_coding MGP_WSBEiJ_T0064054.1 MGP_WSBEiJ_G0027401.1 mouse_genomes_project 4 39280659 39283521 - MGP_WSBEiJ_P0064054 Sigmar1 protein_coding protein_coding MGP_WSBEiJ_T0064055.1 MGP_WSBEiJ_G0027401.1 mouse_genomes_project 4 39280659 39283521 - MGP_WSBEiJ_P0064055 Sigmar1 protein_coding protein_coding MGP_WSBEiJ_T0064056.1 MGP_WSBEiJ_G0027401.1 mouse_genomes_project 4 39281262 39287219 - Sigmar1 protein_coding processed_transcript MGP_WSBEiJ_T0064057.1 MGP_WSBEiJ_G0027401.1 mouse_genomes_project 4 39281667 39298313 - Sigmar1 protein_coding processed_transcript MGP_WSBEiJ_T0064058.1 MGP_WSBEiJ_G0027401.1 mouse_genomes_project 4 39282610 39283348 - Sigmar1 protein_coding retained_intron MGP_WSBEiJ_T0064059.1 MGP_WSBEiJ_G0027401.1 mouse_genomes_project 4 39282742 39283210 - Sigmar1 protein_coding retained_intron MGP_WSBEiJ_T0064060.1 MGP_WSBEiJ_G0027401.1 mouse_genomes_project 4 39282764 39283482 - Sigmar1 protein_coding processed_transcript MGP_WSBEiJ_T0064061.1 MGP_WSBEiJ_G0027401.1 mouse_genomes_project 4 39297741 39299071 - Sigmar1 protein_coding processed_transcript MGP_WSBEiJ_T0001389.1 MGP_WSBEiJ_G0001318.1 mouse_genomes_project 4 142793729 142795004 - TEC TEC MGP_WSBEiJ_T0001390.1 MGP_WSBEiJ_G0001318.1 mouse_genomes_project 4 142793735 142795004 - TEC TEC MGP_WSBEiJ_T0066595.1 MGP_WSBEiJ_G0027980.1 mouse_genomes_project 4 126544526 126584509 + MGP_WSBEiJ_P0066595 Stk40 protein_coding protein_coding MGP_WSBEiJ_T0066596.1 MGP_WSBEiJ_G0027980.1 mouse_genomes_project 4 126544541 126584509 + MGP_WSBEiJ_P0066596 Stk40 protein_coding protein_coding MGP_WSBEiJ_T0066597.1 MGP_WSBEiJ_G0027980.1 mouse_genomes_project 4 126544570 126567587 + MGP_WSBEiJ_P0066597 Stk40 protein_coding protein_coding MGP_WSBEiJ_T0066598.1 MGP_WSBEiJ_G0027980.1 mouse_genomes_project 4 126544604 126559886 + Stk40 protein_coding processed_transcript MGP_WSBEiJ_T0066599.1 MGP_WSBEiJ_G0027980.1 mouse_genomes_project 4 126560459 126571404 + MGP_WSBEiJ_P0066599 Stk40 protein_coding protein_coding MGP_WSBEiJ_T0066600.1 MGP_WSBEiJ_G0027980.1 mouse_genomes_project 4 126571254 126575232 + Stk40 protein_coding processed_transcript MGP_WSBEiJ_T0017460.1 MGP_WSBEiJ_G0014970.1 mouse_genomes_project 4 56060010 56067357 - Gm12526 processed_transcript processed_transcript MGP_WSBEiJ_T0064633.1 MGP_WSBEiJ_G0027523.1 mouse_genomes_project 4 53709107 53715434 - MGP_WSBEiJ_P0064633 protein_coding protein_coding MGP_WSBEiJ_T0064634.1 MGP_WSBEiJ_G0027523.1 mouse_genomes_project 4 53713661 53714829 - MGP_WSBEiJ_P0064634 protein_coding protein_coding MGP_WSBEiJ_T0064635.1 MGP_WSBEiJ_G0027523.1 mouse_genomes_project 4 53713770 53715434 - MGP_WSBEiJ_P0064635 protein_coding protein_coding MGP_WSBEiJ_T0007814.1 MGP_WSBEiJ_G0006392.1 mouse_genomes_project 4 119089098 119103910 - Gm12866 lincRNA lincRNA MGP_WSBEiJ_T0065471.1 MGP_WSBEiJ_G0027730.1 mouse_genomes_project 4 106046838 106172773 + MGP_WSBEiJ_P0065471 Usp24 protein_coding protein_coding MGP_WSBEiJ_T0065472.1 MGP_WSBEiJ_G0027730.1 mouse_genomes_project 4 106046845 106091501 + Usp24 protein_coding retained_intron MGP_WSBEiJ_T0065473.1 MGP_WSBEiJ_G0027730.1 mouse_genomes_project 4 106046859 106172778 + MGP_WSBEiJ_P0065473 Usp24 protein_coding protein_coding MGP_WSBEiJ_T0065474.1 MGP_WSBEiJ_G0027730.1 mouse_genomes_project 4 106159950 106162310 + Usp24 protein_coding processed_transcript MGP_WSBEiJ_T0068198.1 MGP_WSBEiJ_G0028343.1 mouse_genomes_project 4 152142741 152167634 - MGP_WSBEiJ_P0068198 H6pd protein_coding protein_coding MGP_WSBEiJ_T0068199.1 MGP_WSBEiJ_G0028343.1 mouse_genomes_project 4 152142741 152174549 - MGP_WSBEiJ_P0068199 H6pd protein_coding protein_coding MGP_WSBEiJ_T0068200.1 MGP_WSBEiJ_G0028343.1 mouse_genomes_project 4 152160360 152165769 - MGP_WSBEiJ_P0068200 H6pd protein_coding protein_coding MGP_WSBEiJ_T0068201.1 MGP_WSBEiJ_G0028343.1 mouse_genomes_project 4 152164288 152165794 - H6pd protein_coding processed_transcript MGP_WSBEiJ_T0064494.1 MGP_WSBEiJ_G0027482.1 mouse_genomes_project 4 44993915 45021545 + MGP_WSBEiJ_P0064494 Galnt12 protein_coding protein_coding MGP_WSBEiJ_T0007872.1 MGP_WSBEiJ_G0006430.1 mouse_genomes_project 4 138274262 138275142 - 1700037C06Rik lincRNA lincRNA MGP_WSBEiJ_T0096822.1 MGP_WSBEiJ_G0035503.1 mouse_genomes_project 4 34319150 34319488 - pseudogene pseudogene MGP_WSBEiJ_T0065443.1 MGP_WSBEiJ_G0027719.1 mouse_genomes_project 4 102841793 102901622 - MGP_WSBEiJ_P0065443 4921539E11Rik protein_coding protein_coding MGP_WSBEiJ_T0065444.1 MGP_WSBEiJ_G0027719.1 mouse_genomes_project 4 102841793 102901622 - MGP_WSBEiJ_P0065444 4921539E11Rik protein_coding protein_coding MGP_WSBEiJ_T0065445.1 MGP_WSBEiJ_G0027719.1 mouse_genomes_project 4 102849008 102901622 - MGP_WSBEiJ_P0065445 4921539E11Rik protein_coding protein_coding MGP_WSBEiJ_T0065363.1 MGP_WSBEiJ_G0027705.1 mouse_genomes_project 4 101042990 101155249 + MGP_WSBEiJ_P0065363 Dnajc6 protein_coding protein_coding MGP_WSBEiJ_T0065364.1 MGP_WSBEiJ_G0027705.1 mouse_genomes_project 4 101054209 101193987 + MGP_WSBEiJ_P0065364 Dnajc6 protein_coding protein_coding MGP_WSBEiJ_T0065365.1 MGP_WSBEiJ_G0027705.1 mouse_genomes_project 4 101054314 101161184 + MGP_WSBEiJ_P0065365 Dnajc6 protein_coding protein_coding MGP_WSBEiJ_T0065366.1 MGP_WSBEiJ_G0027705.1 mouse_genomes_project 4 101054368 101147697 + Dnajc6 protein_coding processed_transcript MGP_WSBEiJ_T0065367.1 MGP_WSBEiJ_G0027705.1 mouse_genomes_project 4 101096498 101192016 + MGP_WSBEiJ_P0065367 Dnajc6 protein_coding protein_coding MGP_WSBEiJ_T0014044.1 MGP_WSBEiJ_G0012174.1 mouse_genomes_project 4 18963211 18963610 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063723.1 MGP_WSBEiJ_G0027323.1 mouse_genomes_project 4 18595987 18612612 + Usp45 protein_coding processed_transcript MGP_WSBEiJ_T0063724.1 MGP_WSBEiJ_G0027323.1 mouse_genomes_project 4 18605898 18614960 + Usp45 protein_coding retained_intron MGP_WSBEiJ_T0063725.1 MGP_WSBEiJ_G0027323.1 mouse_genomes_project 4 18605909 18668749 + MGP_WSBEiJ_P0063725 Usp45 protein_coding protein_coding MGP_WSBEiJ_T0063726.1 MGP_WSBEiJ_G0027323.1 mouse_genomes_project 4 18605909 18668751 + MGP_WSBEiJ_P0063726 Usp45 protein_coding protein_coding MGP_WSBEiJ_T0063727.1 MGP_WSBEiJ_G0027323.1 mouse_genomes_project 4 18605918 18629948 + MGP_WSBEiJ_P0063727 Usp45 protein_coding protein_coding MGP_WSBEiJ_T0063728.1 MGP_WSBEiJ_G0027323.1 mouse_genomes_project 4 18605935 18668751 + MGP_WSBEiJ_P0063728 Usp45 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063729.1 MGP_WSBEiJ_G0027323.1 mouse_genomes_project 4 18611872 18668749 + MGP_WSBEiJ_P0063729 Usp45 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063730.1 MGP_WSBEiJ_G0027323.1 mouse_genomes_project 4 18614843 18647931 + MGP_WSBEiJ_P0063730 Usp45 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0007896.1 MGP_WSBEiJ_G0006453.1 mouse_genomes_project 4 151932567 151933241 - Gm13073 lincRNA lincRNA MGP_WSBEiJ_T0067866.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143166342 143190081 - MGP_WSBEiJ_P0067866 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067867.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143166342 143188388 - MGP_WSBEiJ_P0067867 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067868.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143166342 143196214 - MGP_WSBEiJ_P0067868 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067869.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143179478 143189992 - MGP_WSBEiJ_P0067869 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067870.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143179500 143196258 - MGP_WSBEiJ_P0067870 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067871.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143179500 143196199 - MGP_WSBEiJ_P0067871 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067872.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143179523 143188681 - MGP_WSBEiJ_P0067872 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067873.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143180167 143190189 - MGP_WSBEiJ_P0067873 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067874.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143180230 143186628 - Fblim1 protein_coding processed_transcript MGP_WSBEiJ_T0067875.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143180246 143190045 - MGP_WSBEiJ_P0067875 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067876.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143180247 143188388 - MGP_WSBEiJ_P0067876 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067877.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143180257 143188370 - MGP_WSBEiJ_P0067877 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067878.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143185406 143196187 - MGP_WSBEiJ_P0067878 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067879.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143185457 143196198 - MGP_WSBEiJ_P0067879 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0067880.1 MGP_WSBEiJ_G0028258.1 mouse_genomes_project 4 143185524 143196189 - MGP_WSBEiJ_P0067880 Fblim1 protein_coding protein_coding MGP_WSBEiJ_T0004362.1 MGP_WSBEiJ_G0003800.1 mouse_genomes_project 4 39047574 39049040 + Fam219aos antisense antisense MGP_WSBEiJ_T0004524.1 MGP_WSBEiJ_G0003923.1 mouse_genomes_project 4 153059393 153088114 - 1700045H11Rik antisense antisense MGP_WSBEiJ_T0066788.1 MGP_WSBEiJ_G0028023.1 mouse_genomes_project 4 129777392 129784997 + MGP_WSBEiJ_P0066788 Fndc5 protein_coding protein_coding MGP_WSBEiJ_T0007756.1 MGP_WSBEiJ_G0006346.1 mouse_genomes_project 4 81040458 81066752 - Gm11264 lincRNA lincRNA MGP_WSBEiJ_T0065449.1 MGP_WSBEiJ_G0027721.1 mouse_genomes_project 4 103249419 103828305 + Dab1 protein_coding processed_transcript MGP_WSBEiJ_T0065450.1 MGP_WSBEiJ_G0027721.1 mouse_genomes_project 4 103249725 104350922 + MGP_WSBEiJ_P0065450 Dab1 protein_coding protein_coding MGP_WSBEiJ_T0065451.1 MGP_WSBEiJ_G0027721.1 mouse_genomes_project 4 104024087 104350036 + MGP_WSBEiJ_P0065451 Dab1 protein_coding protein_coding MGP_WSBEiJ_T0065452.1 MGP_WSBEiJ_G0027721.1 mouse_genomes_project 4 104024563 104417113 + MGP_WSBEiJ_P0065452 Dab1 protein_coding protein_coding MGP_WSBEiJ_T0065453.1 MGP_WSBEiJ_G0027721.1 mouse_genomes_project 4 104024563 104414066 + MGP_WSBEiJ_P0065453 Dab1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065454.1 MGP_WSBEiJ_G0027721.1 mouse_genomes_project 4 104174452 104350922 + MGP_WSBEiJ_P0065454 Dab1 protein_coding protein_coding MGP_WSBEiJ_T0065455.1 MGP_WSBEiJ_G0027721.1 mouse_genomes_project 4 104253976 104349332 + Dab1 protein_coding processed_transcript MGP_WSBEiJ_T0065456.1 MGP_WSBEiJ_G0027721.1 mouse_genomes_project 4 104268031 104385175 + MGP_WSBEiJ_P0065456 Dab1 protein_coding protein_coding MGP_WSBEiJ_T0063907.1 MGP_WSBEiJ_G0027362.1 mouse_genomes_project 4 32071412 32151152 - MGP_WSBEiJ_P0063907 Zfp292 protein_coding protein_coding MGP_WSBEiJ_T0063908.1 MGP_WSBEiJ_G0027362.1 mouse_genomes_project 4 32071412 32151122 - MGP_WSBEiJ_P0063908 Zfp292 protein_coding protein_coding MGP_WSBEiJ_T0011362.1 MGP_WSBEiJ_G0009519.1 mouse_genomes_project 4 41581084 41581161 + Gm27265 misc_RNA misc_RNA MGP_WSBEiJ_T0065858.1 MGP_WSBEiJ_G0027797.1 mouse_genomes_project 4 112093050 112106905 + MGP_WSBEiJ_P0065858 Skint2 protein_coding protein_coding MGP_WSBEiJ_T0065859.1 MGP_WSBEiJ_G0027797.1 mouse_genomes_project 4 112093193 112124423 + MGP_WSBEiJ_P0065859 Skint2 protein_coding protein_coding MGP_WSBEiJ_T0065860.1 MGP_WSBEiJ_G0027797.1 mouse_genomes_project 4 112093204 112119965 + Skint2 protein_coding processed_transcript MGP_WSBEiJ_T0065861.1 MGP_WSBEiJ_G0027797.1 mouse_genomes_project 4 112097388 112119965 + MGP_WSBEiJ_P0065861 Skint2 protein_coding protein_coding MGP_WSBEiJ_T0014181.1 MGP_WSBEiJ_G0012311.1 mouse_genomes_project 4 70594461 70595461 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007840.1 MGP_WSBEiJ_G0006409.1 mouse_genomes_project 4 129775458 129777304 + Gm15906 lincRNA lincRNA MGP_WSBEiJ_T0065183.1 MGP_WSBEiJ_G0027664.1 mouse_genomes_project 4 94003065 94016594 - MGP_WSBEiJ_P0065183 Lrrc19 protein_coding protein_coding MGP_WSBEiJ_T0065184.1 MGP_WSBEiJ_G0027664.1 mouse_genomes_project 4 94003065 94016622 - MGP_WSBEiJ_P0065184 Lrrc19 protein_coding protein_coding MGP_WSBEiJ_T0098241.1 MGP_WSBEiJ_G0036904.1 mouse_genomes_project 4 31337576 31337684 + Gm25623 snRNA snRNA MGP_WSBEiJ_T0014122.1 MGP_WSBEiJ_G0012252.1 mouse_genomes_project 4 46648834 46649199 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067984.1 MGP_WSBEiJ_G0028300.1 mouse_genomes_project 4 149551967 149581334 - MGP_WSBEiJ_P0067984 Zfp979 protein_coding protein_coding MGP_WSBEiJ_T0068627.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158323914 158345613 - MGP_WSBEiJ_P0068627 Atad3a protein_coding protein_coding MGP_WSBEiJ_T0068628.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158324107 158329619 - Atad3a protein_coding retained_intron MGP_WSBEiJ_T0068629.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158329340 158334070 - Atad3a protein_coding retained_intron MGP_WSBEiJ_T0068630.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158330475 158333938 - Atad3a protein_coding retained_intron MGP_WSBEiJ_T0068631.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158334962 158340595 - MGP_WSBEiJ_P0068631 Atad3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068632.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158335264 158339286 - MGP_WSBEiJ_P0068632 Atad3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068633.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158336244 158345448 - MGP_WSBEiJ_P0068633 Atad3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068634.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158338134 158345588 - MGP_WSBEiJ_P0068634 Atad3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068635.1 MGP_WSBEiJ_G0028419.1 mouse_genomes_project 4 158340356 158345607 - Atad3a protein_coding retained_intron MGP_WSBEiJ_T0007675.1 MGP_WSBEiJ_G0006277.1 mouse_genomes_project 4 4188806 4203521 + 8430436N08Rik lincRNA lincRNA MGP_WSBEiJ_T0004503.1 MGP_WSBEiJ_G0003907.1 mouse_genomes_project 4 143810570 143814104 + Gm13062 antisense antisense MGP_WSBEiJ_T0067752.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142011910 142086578 - MGP_WSBEiJ_P0067752 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0067753.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142011910 142158086 - MGP_WSBEiJ_P0067753 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0067754.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142011910 142077856 - MGP_WSBEiJ_P0067754 Arhgef10l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067755.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142011910 142158086 - MGP_WSBEiJ_P0067755 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0067756.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142011910 142158092 - MGP_WSBEiJ_P0067756 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0067757.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142011910 142082575 - MGP_WSBEiJ_P0067757 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0067758.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142011910 142181317 - MGP_WSBEiJ_P0067758 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0067759.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142043901 142068964 - MGP_WSBEiJ_P0067759 Arhgef10l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067760.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142076210 142082559 - MGP_WSBEiJ_P0067760 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0067761.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142081622 142094972 - Arhgef10l protein_coding retained_intron MGP_WSBEiJ_T0067762.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142094863 142158696 - MGP_WSBEiJ_P0067762 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0067763.1 MGP_WSBEiJ_G0028233.1 mouse_genomes_project 4 142096116 142121628 - MGP_WSBEiJ_P0067763 Arhgef10l protein_coding protein_coding MGP_WSBEiJ_T0064547.1 MGP_WSBEiJ_G0027494.1 mouse_genomes_project 4 46637245 46647178 + MGP_WSBEiJ_P0064547 Murc protein_coding protein_coding MGP_WSBEiJ_T0064889.1 MGP_WSBEiJ_G0027592.1 mouse_genomes_project 4 64248335 64262914 + MGP_WSBEiJ_P0064889 Trim32 protein_coding protein_coding MGP_WSBEiJ_T0064890.1 MGP_WSBEiJ_G0027592.1 mouse_genomes_project 4 64248335 64262914 + MGP_WSBEiJ_P0064890 Trim32 protein_coding protein_coding MGP_WSBEiJ_T0064891.1 MGP_WSBEiJ_G0027592.1 mouse_genomes_project 4 64248598 64260280 + MGP_WSBEiJ_P0064891 Trim32 protein_coding protein_coding MGP_WSBEiJ_T0064892.1 MGP_WSBEiJ_G0027592.1 mouse_genomes_project 4 64248598 64260420 + MGP_WSBEiJ_P0064892 Trim32 protein_coding protein_coding MGP_WSBEiJ_T0067377.1 MGP_WSBEiJ_G0028142.1 mouse_genomes_project 4 135863646 135899069 + MGP_WSBEiJ_P0067377 Rhd protein_coding protein_coding MGP_WSBEiJ_T0067378.1 MGP_WSBEiJ_G0028142.1 mouse_genomes_project 4 135881886 135893207 + Rhd protein_coding retained_intron MGP_WSBEiJ_T0014344.1 MGP_WSBEiJ_G0012474.1 mouse_genomes_project 4 125389820 125390144 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066068.1 MGP_WSBEiJ_G0027847.1 mouse_genomes_project 4 116765441 116885662 + MGP_WSBEiJ_P0066068 Zswim5 protein_coding protein_coding MGP_WSBEiJ_T0098246.1 MGP_WSBEiJ_G0036909.1 mouse_genomes_project 4 38531110 38531217 + Gm25637 snRNA snRNA MGP_WSBEiJ_T0004516.1 MGP_WSBEiJ_G0003917.1 mouse_genomes_project 4 151472379 151489539 + Ube4bos1 antisense antisense MGP_WSBEiJ_T0004517.1 MGP_WSBEiJ_G0003917.1 mouse_genomes_project 4 151472408 151483614 + Ube4bos1 antisense antisense MGP_WSBEiJ_T0065409.1 MGP_WSBEiJ_G0027714.1 mouse_genomes_project 4 102583295 102608639 + MGP_WSBEiJ_P0065409 Tctex1d1 protein_coding protein_coding MGP_WSBEiJ_T0065410.1 MGP_WSBEiJ_G0027714.1 mouse_genomes_project 4 102589406 102608869 + MGP_WSBEiJ_P0065410 Tctex1d1 protein_coding protein_coding MGP_WSBEiJ_T0065411.1 MGP_WSBEiJ_G0027714.1 mouse_genomes_project 4 102591600 102609889 + MGP_WSBEiJ_P0065411 Tctex1d1 protein_coding protein_coding MGP_WSBEiJ_T0065412.1 MGP_WSBEiJ_G0027714.1 mouse_genomes_project 4 102594865 102595931 + Tctex1d1 protein_coding processed_transcript MGP_WSBEiJ_T0014067.1 MGP_WSBEiJ_G0012197.1 mouse_genomes_project 4 25536148 25536495 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010451.1 MGP_WSBEiJ_G0008608.1 mouse_genomes_project 4 125096837 125096946 + Mir698 miRNA miRNA MGP_WSBEiJ_T0067746.1 MGP_WSBEiJ_G0028229.1 mouse_genomes_project 4 141072956 141090947 + MGP_WSBEiJ_P0067746 Tas1r2 protein_coding protein_coding MGP_WSBEiJ_T0067747.1 MGP_WSBEiJ_G0028229.1 mouse_genomes_project 4 141072967 141090527 + MGP_WSBEiJ_P0067747 Tas1r2 protein_coding protein_coding MGP_WSBEiJ_T0014192.1 MGP_WSBEiJ_G0012322.1 mouse_genomes_project 4 73903193 73904574 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064073.1 MGP_WSBEiJ_G0027404.1 mouse_genomes_project 4 39379240 39380363 - MGP_WSBEiJ_P0064073 protein_coding protein_coding MGP_WSBEiJ_T0067654.1 MGP_WSBEiJ_G0028203.1 mouse_genomes_project 4 139701524 139703960 - MGP_WSBEiJ_P0067654 Fam43b protein_coding protein_coding MGP_WSBEiJ_T0065602.1 MGP_WSBEiJ_G0027754.1 mouse_genomes_project 4 107463668 107473468 - MGP_WSBEiJ_P0065602 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065603.1 MGP_WSBEiJ_G0027754.1 mouse_genomes_project 4 107463674 107470892 - MGP_WSBEiJ_P0065603 protein_coding protein_coding MGP_WSBEiJ_T0065604.1 MGP_WSBEiJ_G0027754.1 mouse_genomes_project 4 107464288 107468247 - protein_coding retained_intron MGP_WSBEiJ_T0014128.1 MGP_WSBEiJ_G0012258.1 mouse_genomes_project 4 47777256 47777771 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067930.1 MGP_WSBEiJ_G0028273.1 mouse_genomes_project 4 144780673 144891042 - MGP_WSBEiJ_P0067930 Prdm2 protein_coding protein_coding MGP_WSBEiJ_T0067931.1 MGP_WSBEiJ_G0028273.1 mouse_genomes_project 4 144840283 144873509 - MGP_WSBEiJ_P0067931 Prdm2 protein_coding protein_coding MGP_WSBEiJ_T0067932.1 MGP_WSBEiJ_G0028273.1 mouse_genomes_project 4 144840307 144891046 - MGP_WSBEiJ_P0067932 Prdm2 protein_coding protein_coding MGP_WSBEiJ_T0067933.1 MGP_WSBEiJ_G0028273.1 mouse_genomes_project 4 144856725 144891326 - Prdm2 protein_coding processed_transcript MGP_WSBEiJ_T0014032.1 MGP_WSBEiJ_G0012162.1 mouse_genomes_project 4 14843549 14844559 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010488.1 MGP_WSBEiJ_G0008645.1 mouse_genomes_project 4 158842579 158842636 - Mir7658 miRNA miRNA MGP_WSBEiJ_T0064689.1 MGP_WSBEiJ_G0027537.1 mouse_genomes_project 4 56226636 56235848 - MGP_WSBEiJ_P0064689 D630039A03Rik protein_coding protein_coding MGP_WSBEiJ_T0066601.1 MGP_WSBEiJ_G0027981.1 mouse_genomes_project 4 126597205 126599336 + MGP_WSBEiJ_P0066601 Eva1b protein_coding protein_coding MGP_WSBEiJ_T0066602.1 MGP_WSBEiJ_G0027981.1 mouse_genomes_project 4 126597464 126599337 + MGP_WSBEiJ_P0066602 Eva1b protein_coding protein_coding MGP_WSBEiJ_T0066603.1 MGP_WSBEiJ_G0027981.1 mouse_genomes_project 4 126597993 126599327 + MGP_WSBEiJ_P0066603 Eva1b protein_coding protein_coding MGP_WSBEiJ_T0007763.1 MGP_WSBEiJ_G0006351.1 mouse_genomes_project 4 83151899 83155839 - Gm12414 lincRNA lincRNA MGP_WSBEiJ_T0004374.1 MGP_WSBEiJ_G0003810.1 mouse_genomes_project 4 42996339 43007042 - Frmpd1os antisense antisense MGP_WSBEiJ_T0014116.1 MGP_WSBEiJ_G0012246.1 mouse_genomes_project 4 43113429 43113726 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007732.1 MGP_WSBEiJ_G0006324.1 mouse_genomes_project 4 53628385 53648341 - Gm12510 lincRNA lincRNA MGP_WSBEiJ_T0098309.1 MGP_WSBEiJ_G0036972.1 mouse_genomes_project 4 140190502 140190610 - Gm25280 snRNA snRNA MGP_WSBEiJ_T0014379.1 MGP_WSBEiJ_G0012509.1 mouse_genomes_project 4 140739571 140745047 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066910.1 MGP_WSBEiJ_G0028045.1 mouse_genomes_project 4 130341636 130373481 - MGP_WSBEiJ_P0066910 Kpna6 protein_coding protein_coding MGP_WSBEiJ_T0066911.1 MGP_WSBEiJ_G0028045.1 mouse_genomes_project 4 130351307 130352588 - Kpna6 protein_coding retained_intron MGP_WSBEiJ_T0066912.1 MGP_WSBEiJ_G0028045.1 mouse_genomes_project 4 130351955 130354393 - Kpna6 protein_coding retained_intron MGP_WSBEiJ_T0066913.1 MGP_WSBEiJ_G0028045.1 mouse_genomes_project 4 130355113 130373242 - MGP_WSBEiJ_P0066913 Kpna6 protein_coding protein_coding MGP_WSBEiJ_T0066914.1 MGP_WSBEiJ_G0028045.1 mouse_genomes_project 4 130358651 130373481 - Kpna6 protein_coding retained_intron MGP_WSBEiJ_T0004388.1 MGP_WSBEiJ_G0003823.1 mouse_genomes_project 4 81527813 81573091 + Gm11266 antisense antisense MGP_WSBEiJ_T0001372.1 MGP_WSBEiJ_G0001301.1 mouse_genomes_project 4 13185107 13185713 + TEC TEC MGP_WSBEiJ_T0063445.1 MGP_WSBEiJ_G0027254.1 mouse_genomes_project 4 117535 144753 - MGP_WSBEiJ_P0063445 Tmem68 protein_coding protein_coding MGP_WSBEiJ_T0063446.1 MGP_WSBEiJ_G0027254.1 mouse_genomes_project 4 117535 144709 - MGP_WSBEiJ_P0063446 Tmem68 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063447.1 MGP_WSBEiJ_G0027254.1 mouse_genomes_project 4 118822 120648 - Tmem68 protein_coding retained_intron MGP_WSBEiJ_T0063448.1 MGP_WSBEiJ_G0027254.1 mouse_genomes_project 4 139242 144704 - Tmem68 protein_coding retained_intron MGP_WSBEiJ_T0063449.1 MGP_WSBEiJ_G0027254.1 mouse_genomes_project 4 139261 144704 - Tmem68 protein_coding processed_transcript MGP_WSBEiJ_T0063450.1 MGP_WSBEiJ_G0027254.1 mouse_genomes_project 4 139436 144427 - MGP_WSBEiJ_P0063450 Tmem68 protein_coding protein_coding MGP_WSBEiJ_T0064618.1 MGP_WSBEiJ_G0027518.1 mouse_genomes_project 4 51859776 51909347 + MGP_WSBEiJ_P0064618 Fktn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064619.1 MGP_WSBEiJ_G0027518.1 mouse_genomes_project 4 51860141 51912370 + MGP_WSBEiJ_P0064619 Fktn protein_coding protein_coding MGP_WSBEiJ_T0013997.1 MGP_WSBEiJ_G0012127.1 mouse_genomes_project 4 2887737 2888612 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098235.1 MGP_WSBEiJ_G0036898.1 mouse_genomes_project 4 12155240 12155347 + Gm24317 snRNA snRNA MGP_WSBEiJ_T0063484.1 MGP_WSBEiJ_G0027262.1 mouse_genomes_project 4 701761 724282 - MGP_WSBEiJ_P0063484 Sdr16c6 protein_coding protein_coding MGP_WSBEiJ_T0063485.1 MGP_WSBEiJ_G0027262.1 mouse_genomes_project 4 701763 724873 - MGP_WSBEiJ_P0063485 Sdr16c6 protein_coding protein_coding MGP_WSBEiJ_T0014334.1 MGP_WSBEiJ_G0012464.1 mouse_genomes_project 4 123510166 123511020 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017490.1 MGP_WSBEiJ_G0014990.1 mouse_genomes_project 4 116454879 116463283 - C530005A16Rik processed_transcript processed_transcript MGP_WSBEiJ_T0066038.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116585416 116586626 + MGP_WSBEiJ_P0066038 Ccdc163 protein_coding protein_coding MGP_WSBEiJ_T0066039.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116585427 116587103 + MGP_WSBEiJ_P0066039 Ccdc163 protein_coding protein_coding MGP_WSBEiJ_T0066040.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116585433 116586581 + Ccdc163 protein_coding processed_transcript MGP_WSBEiJ_T0066041.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116585442 116587325 + Ccdc163 protein_coding retained_intron MGP_WSBEiJ_T0066042.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116585522 116586329 + MGP_WSBEiJ_P0066042 Ccdc163 protein_coding protein_coding MGP_WSBEiJ_T0066043.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116585747 116591883 + MGP_WSBEiJ_P0066043 Ccdc163 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066044.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116585835 116591886 + MGP_WSBEiJ_P0066044 Ccdc163 protein_coding protein_coding MGP_WSBEiJ_T0066045.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116589208 116619915 + Ccdc163 protein_coding processed_transcript MGP_WSBEiJ_T0066046.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116589506 116630646 + Ccdc163 protein_coding processed_transcript MGP_WSBEiJ_T0066047.1 MGP_WSBEiJ_G0027842.1 mouse_genomes_project 4 116589573 116591878 + MGP_WSBEiJ_P0066047 Ccdc163 protein_coding protein_coding MGP_WSBEiJ_T0011366.1 MGP_WSBEiJ_G0009523.1 mouse_genomes_project 4 49630045 49630314 + Gm22563 misc_RNA misc_RNA MGP_WSBEiJ_T0068291.1 MGP_WSBEiJ_G0028360.1 mouse_genomes_project 4 154293406 154299773 - MGP_WSBEiJ_P0068291 Thap3 protein_coding protein_coding MGP_WSBEiJ_T0068292.1 MGP_WSBEiJ_G0028360.1 mouse_genomes_project 4 154293569 154299746 - MGP_WSBEiJ_P0068292 Thap3 protein_coding protein_coding MGP_WSBEiJ_T0068293.1 MGP_WSBEiJ_G0028360.1 mouse_genomes_project 4 154296225 154299756 - Thap3 protein_coding retained_intron MGP_WSBEiJ_T0067561.1 MGP_WSBEiJ_G0028187.1 mouse_genomes_project 4 138566987 138576576 - MGP_WSBEiJ_P0067561 Cela3a protein_coding protein_coding MGP_WSBEiJ_T0066769.1 MGP_WSBEiJ_G0028020.1 mouse_genomes_project 4 129689584 129717163 + MGP_WSBEiJ_P0066769 Rnf19b protein_coding protein_coding MGP_WSBEiJ_T0066770.1 MGP_WSBEiJ_G0028020.1 mouse_genomes_project 4 129689584 129718372 + MGP_WSBEiJ_P0066770 Rnf19b protein_coding protein_coding MGP_WSBEiJ_T0066771.1 MGP_WSBEiJ_G0028020.1 mouse_genomes_project 4 129689722 129713202 + MGP_WSBEiJ_P0066771 Rnf19b protein_coding protein_coding MGP_WSBEiJ_T0066772.1 MGP_WSBEiJ_G0028020.1 mouse_genomes_project 4 129690127 129717163 + MGP_WSBEiJ_P0066772 Rnf19b protein_coding protein_coding MGP_WSBEiJ_T0066773.1 MGP_WSBEiJ_G0028020.1 mouse_genomes_project 4 129711625 129718523 + MGP_WSBEiJ_P0066773 Rnf19b protein_coding protein_coding MGP_WSBEiJ_T0066774.1 MGP_WSBEiJ_G0028020.1 mouse_genomes_project 4 129716521 129718523 + Rnf19b protein_coding processed_transcript MGP_WSBEiJ_T0065466.1 MGP_WSBEiJ_G0027727.1 mouse_genomes_project 4 104841830 104918122 + MGP_WSBEiJ_P0065466 Plpp3 protein_coding protein_coding MGP_WSBEiJ_T0065963.1 MGP_WSBEiJ_G0027827.1 mouse_genomes_project 4 115931341 115937107 - Rad54l protein_coding processed_transcript MGP_WSBEiJ_T0065964.1 MGP_WSBEiJ_G0027827.1 mouse_genomes_project 4 115933965 115963169 - MGP_WSBEiJ_P0065964 Rad54l protein_coding protein_coding MGP_WSBEiJ_T0065965.1 MGP_WSBEiJ_G0027827.1 mouse_genomes_project 4 115934024 115963143 - MGP_WSBEiJ_P0065965 Rad54l protein_coding protein_coding MGP_WSBEiJ_T0065966.1 MGP_WSBEiJ_G0027827.1 mouse_genomes_project 4 115949842 115962466 - Rad54l protein_coding processed_transcript MGP_WSBEiJ_T0065967.1 MGP_WSBEiJ_G0027827.1 mouse_genomes_project 4 115951141 115952623 - Rad54l protein_coding processed_transcript MGP_WSBEiJ_T0065968.1 MGP_WSBEiJ_G0027827.1 mouse_genomes_project 4 115957480 115963174 - Rad54l protein_coding processed_transcript MGP_WSBEiJ_T0066375.1 MGP_WSBEiJ_G0027915.1 mouse_genomes_project 4 120243965 120250142 + MGP_WSBEiJ_P0066375 Edn2 protein_coding protein_coding MGP_WSBEiJ_T0066377.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120507202 120555286 + Scmh1 protein_coding processed_transcript MGP_WSBEiJ_T0066378.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120507228 120637491 + MGP_WSBEiJ_P0066378 Scmh1 protein_coding protein_coding MGP_WSBEiJ_T0066379.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120507287 120564462 + Scmh1 protein_coding processed_transcript MGP_WSBEiJ_T0066380.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120507302 120549494 + Scmh1 protein_coding processed_transcript MGP_WSBEiJ_T0066381.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120507349 120564427 + MGP_WSBEiJ_P0066381 Scmh1 protein_coding protein_coding MGP_WSBEiJ_T0066382.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120547912 120637491 + MGP_WSBEiJ_P0066382 Scmh1 protein_coding protein_coding MGP_WSBEiJ_T0066383.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120554013 120637469 + MGP_WSBEiJ_P0066383 Scmh1 protein_coding protein_coding MGP_WSBEiJ_T0066384.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120563421 120636566 + MGP_WSBEiJ_P0066384 Scmh1 protein_coding protein_coding MGP_WSBEiJ_T0066385.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120605531 120637491 + Scmh1 protein_coding processed_transcript MGP_WSBEiJ_T0066386.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120607060 120627040 + MGP_WSBEiJ_P0066386 Scmh1 protein_coding protein_coding MGP_WSBEiJ_T0066387.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120622111 120637491 + Scmh1 protein_coding processed_transcript MGP_WSBEiJ_T0066388.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120622164 120637108 + Scmh1 protein_coding processed_transcript MGP_WSBEiJ_T0066389.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120635135 120636527 + Scmh1 protein_coding processed_transcript MGP_WSBEiJ_T0066390.1 MGP_WSBEiJ_G0027917.1 mouse_genomes_project 4 120636461 120637493 + Scmh1 protein_coding processed_transcript MGP_WSBEiJ_T0065723.1 MGP_WSBEiJ_G0027777.1 mouse_genomes_project 4 108706451 108708080 + MGP_WSBEiJ_P0065723 Kti12 protein_coding protein_coding MGP_WSBEiJ_T0007753.1 MGP_WSBEiJ_G0006343.1 mouse_genomes_project 4 70694510 70710834 + lincRNA lincRNA MGP_WSBEiJ_T0066648.1 MGP_WSBEiJ_G0027990.1 mouse_genomes_project 4 126924479 126958085 - MGP_WSBEiJ_P0066648 Ago1 protein_coding protein_coding MGP_WSBEiJ_T0066649.1 MGP_WSBEiJ_G0027990.1 mouse_genomes_project 4 126927788 126951289 - MGP_WSBEiJ_P0066649 Ago1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066650.1 MGP_WSBEiJ_G0027990.1 mouse_genomes_project 4 126928970 126948714 - MGP_WSBEiJ_P0066650 Ago1 protein_coding protein_coding MGP_WSBEiJ_T0066651.1 MGP_WSBEiJ_G0027990.1 mouse_genomes_project 4 126932100 126932862 - Ago1 protein_coding retained_intron MGP_WSBEiJ_T0066652.1 MGP_WSBEiJ_G0027990.1 mouse_genomes_project 4 126948821 126949632 - Ago1 protein_coding retained_intron MGP_WSBEiJ_T0007821.1 MGP_WSBEiJ_G0006398.1 mouse_genomes_project 4 124740742 124784376 - 1700057H15Rik lincRNA lincRNA MGP_WSBEiJ_T0007822.1 MGP_WSBEiJ_G0006398.1 mouse_genomes_project 4 124740742 124745157 - 1700057H15Rik lincRNA lincRNA MGP_WSBEiJ_T0007823.1 MGP_WSBEiJ_G0006398.1 mouse_genomes_project 4 124782982 124822203 - 1700057H15Rik lincRNA lincRNA MGP_WSBEiJ_T0007824.1 MGP_WSBEiJ_G0006398.1 mouse_genomes_project 4 124783315 124784366 - 1700057H15Rik lincRNA lincRNA MGP_WSBEiJ_T0064486.1 MGP_WSBEiJ_G0027480.1 mouse_genomes_project 4 44528234 44887523 - MGP_WSBEiJ_P0064486 Gabbr2 protein_coding protein_coding MGP_WSBEiJ_T0064487.1 MGP_WSBEiJ_G0027480.1 mouse_genomes_project 4 44530425 44562903 - Gabbr2 protein_coding processed_transcript MGP_WSBEiJ_T0064488.1 MGP_WSBEiJ_G0027480.1 mouse_genomes_project 4 44550991 44599744 - MGP_WSBEiJ_P0064488 Gabbr2 protein_coding protein_coding MGP_WSBEiJ_T0064489.1 MGP_WSBEiJ_G0027480.1 mouse_genomes_project 4 44679795 44745877 - Gabbr2 protein_coding processed_transcript MGP_WSBEiJ_T0063880.1 MGP_WSBEiJ_G0027357.1 mouse_genomes_project 4 31867530 31913687 + MGP_WSBEiJ_P0063880 Rars2 protein_coding protein_coding MGP_WSBEiJ_T0063881.1 MGP_WSBEiJ_G0027357.1 mouse_genomes_project 4 31867534 31871499 + Rars2 protein_coding processed_transcript MGP_WSBEiJ_T0063882.1 MGP_WSBEiJ_G0027357.1 mouse_genomes_project 4 31867542 31878023 + Rars2 protein_coding processed_transcript MGP_WSBEiJ_T0063883.1 MGP_WSBEiJ_G0027357.1 mouse_genomes_project 4 31867547 31913683 + Rars2 protein_coding processed_transcript MGP_WSBEiJ_T0063884.1 MGP_WSBEiJ_G0027357.1 mouse_genomes_project 4 31867549 31883148 + MGP_WSBEiJ_P0063884 Rars2 protein_coding protein_coding MGP_WSBEiJ_T0063885.1 MGP_WSBEiJ_G0027357.1 mouse_genomes_project 4 31867551 31876015 + Rars2 protein_coding processed_transcript MGP_WSBEiJ_T0063886.1 MGP_WSBEiJ_G0027357.1 mouse_genomes_project 4 31901216 31909712 + Rars2 protein_coding processed_transcript MGP_WSBEiJ_T0010445.1 MGP_WSBEiJ_G0008602.1 mouse_genomes_project 4 120906898 120906987 - Mir30c-1 miRNA miRNA MGP_WSBEiJ_T0014063.1 MGP_WSBEiJ_G0012193.1 mouse_genomes_project 4 24519008 24519445 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010483.1 MGP_WSBEiJ_G0008640.1 mouse_genomes_project 4 155410252 155410347 - Gm25779 miRNA miRNA MGP_WSBEiJ_T0014276.1 MGP_WSBEiJ_G0012406.1 mouse_genomes_project 4 105273148 105273749 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066924.1 MGP_WSBEiJ_G0028048.1 mouse_genomes_project 4 130527603 130561238 + Ptp4a2 protein_coding processed_transcript MGP_WSBEiJ_T0066925.1 MGP_WSBEiJ_G0028048.1 mouse_genomes_project 4 130527606 130528908 + Ptp4a2 protein_coding retained_intron MGP_WSBEiJ_T0066926.1 MGP_WSBEiJ_G0028048.1 mouse_genomes_project 4 130537421 130569635 + MGP_WSBEiJ_P0066926 Ptp4a2 protein_coding protein_coding MGP_WSBEiJ_T0066927.1 MGP_WSBEiJ_G0028048.1 mouse_genomes_project 4 130537932 130561238 + Ptp4a2 protein_coding processed_transcript MGP_WSBEiJ_T0010442.1 MGP_WSBEiJ_G0008599.1 mouse_genomes_project 4 117524473 117524547 + Gm25559 miRNA miRNA MGP_WSBEiJ_T0011358.1 MGP_WSBEiJ_G0009515.1 mouse_genomes_project 4 16377413 16377703 - Gm25655 misc_RNA misc_RNA MGP_WSBEiJ_T0014382.1 MGP_WSBEiJ_G0012512.1 mouse_genomes_project 4 143574315 143574880 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068235.1 MGP_WSBEiJ_G0028351.1 mouse_genomes_project 4 153087095 153103161 + MGP_WSBEiJ_P0068235 Errfi1 protein_coding protein_coding MGP_WSBEiJ_T0068236.1 MGP_WSBEiJ_G0028351.1 mouse_genomes_project 4 153088237 153088979 + Errfi1 protein_coding processed_transcript MGP_WSBEiJ_T0068237.1 MGP_WSBEiJ_G0028351.1 mouse_genomes_project 4 153088237 153103156 + MGP_WSBEiJ_P0068237 Errfi1 protein_coding protein_coding MGP_WSBEiJ_T0065131.1 MGP_WSBEiJ_G0027639.1 mouse_genomes_project 4 87867972 87875976 - MGP_WSBEiJ_P0065131 C87499 protein_coding protein_coding MGP_WSBEiJ_T0065132.1 MGP_WSBEiJ_G0027639.1 mouse_genomes_project 4 87867972 87875928 - MGP_WSBEiJ_P0065132 C87499 protein_coding protein_coding MGP_WSBEiJ_T0065133.1 MGP_WSBEiJ_G0027639.1 mouse_genomes_project 4 87870334 87876128 - MGP_WSBEiJ_P0065133 C87499 protein_coding protein_coding MGP_WSBEiJ_T0065134.1 MGP_WSBEiJ_G0027639.1 mouse_genomes_project 4 87871063 87875859 - MGP_WSBEiJ_P0065134 C87499 protein_coding protein_coding MGP_WSBEiJ_T0065135.1 MGP_WSBEiJ_G0027639.1 mouse_genomes_project 4 87871353 87875908 - MGP_WSBEiJ_P0065135 C87499 protein_coding protein_coding MGP_WSBEiJ_T0066079.1 MGP_WSBEiJ_G0027849.1 mouse_genomes_project 4 116891477 116901873 + MGP_WSBEiJ_P0066079 Hectd3 protein_coding protein_coding MGP_WSBEiJ_T0066080.1 MGP_WSBEiJ_G0027849.1 mouse_genomes_project 4 116894412 116896864 + Hectd3 protein_coding retained_intron MGP_WSBEiJ_T0066081.1 MGP_WSBEiJ_G0027849.1 mouse_genomes_project 4 116899448 116900044 + Hectd3 protein_coding retained_intron MGP_WSBEiJ_T0065990.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116157758 116325180 - MGP_WSBEiJ_P0065990 Mast2 protein_coding protein_coding MGP_WSBEiJ_T0065991.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116158025 116325016 - MGP_WSBEiJ_P0065991 Mast2 protein_coding protein_coding MGP_WSBEiJ_T0065992.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116158026 116325448 - MGP_WSBEiJ_P0065992 Mast2 protein_coding protein_coding MGP_WSBEiJ_T0065993.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116158026 116325448 - MGP_WSBEiJ_P0065993 Mast2 protein_coding protein_coding MGP_WSBEiJ_T0065994.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116159271 116160469 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0065995.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116160833 116162055 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0065996.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116160865 116161902 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0065997.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116163544 116167330 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0065998.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116164106 116169014 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0065999.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116168973 116179217 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0066000.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116171105 116182068 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0066001.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116173689 116263250 - MGP_WSBEiJ_P0066001 Mast2 protein_coding protein_coding MGP_WSBEiJ_T0066002.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116179037 116263266 - MGP_WSBEiJ_P0066002 Mast2 protein_coding protein_coding MGP_WSBEiJ_T0066003.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116184319 116264071 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0066004.1 MGP_WSBEiJ_G0027833.1 mouse_genomes_project 4 116184608 116295884 - Mast2 protein_coding processed_transcript MGP_WSBEiJ_T0100820.1 MGP_WSBEiJ_G0039278.1 mouse_genomes_project 4 90377178 90377847 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0067502.1 MGP_WSBEiJ_G0028168.1 mouse_genomes_project 4 137271492 137295146 + MGP_WSBEiJ_P0067502 E2f2 protein_coding protein_coding MGP_WSBEiJ_T0067503.1 MGP_WSBEiJ_G0028168.1 mouse_genomes_project 4 137279879 137285900 + E2f2 protein_coding processed_transcript MGP_WSBEiJ_T0067445.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136919609 136934942 + MGP_WSBEiJ_P0067445 Srsf10 protein_coding protein_coding MGP_WSBEiJ_T0067446.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136919609 136937495 + MGP_WSBEiJ_P0067446 Srsf10 protein_coding protein_coding MGP_WSBEiJ_T0067447.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136919609 136939025 + MGP_WSBEiJ_P0067447 Srsf10 protein_coding protein_coding MGP_WSBEiJ_T0067448.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136919609 136934942 + MGP_WSBEiJ_P0067448 Srsf10 protein_coding protein_coding MGP_WSBEiJ_T0067449.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136919740 136937495 + Srsf10 protein_coding processed_transcript MGP_WSBEiJ_T0067450.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136919974 136922669 + Srsf10 protein_coding processed_transcript MGP_WSBEiJ_T0067451.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136919994 136923099 + Srsf10 protein_coding processed_transcript MGP_WSBEiJ_T0067452.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136925671 136927533 + Srsf10 protein_coding processed_transcript MGP_WSBEiJ_T0067453.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136925703 136927696 + Srsf10 protein_coding processed_transcript MGP_WSBEiJ_T0067454.1 MGP_WSBEiJ_G0028157.1 mouse_genomes_project 4 136927164 136927739 + Srsf10 protein_coding processed_transcript MGP_WSBEiJ_T0066094.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117022788 117025900 - Btbd19 protein_coding processed_transcript MGP_WSBEiJ_T0066095.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117023446 117025955 - Btbd19 protein_coding processed_transcript MGP_WSBEiJ_T0066096.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117023744 117030467 - MGP_WSBEiJ_P0066096 Btbd19 protein_coding protein_coding MGP_WSBEiJ_T0066097.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117024220 117025929 - Btbd19 protein_coding processed_transcript MGP_WSBEiJ_T0066098.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117024275 117024835 - Btbd19 protein_coding retained_intron MGP_WSBEiJ_T0066099.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117024298 117025447 - Btbd19 protein_coding retained_intron MGP_WSBEiJ_T0066100.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117024882 117030574 - MGP_WSBEiJ_P0066100 Btbd19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066101.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117025009 117030507 - MGP_WSBEiJ_P0066101 Btbd19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066102.1 MGP_WSBEiJ_G0027852.1 mouse_genomes_project 4 117027553 117030015 - Btbd19 protein_coding processed_transcript MGP_WSBEiJ_T0065080.1 MGP_WSBEiJ_G0027626.1 mouse_genomes_project 4 85775434 85787985 - Plin2 protein_coding processed_transcript MGP_WSBEiJ_T0065081.1 MGP_WSBEiJ_G0027626.1 mouse_genomes_project 4 85785872 85800030 - MGP_WSBEiJ_P0065081 Plin2 protein_coding protein_coding MGP_WSBEiJ_T0065082.1 MGP_WSBEiJ_G0027626.1 mouse_genomes_project 4 85786199 85787946 - Plin2 protein_coding processed_transcript MGP_WSBEiJ_T0065083.1 MGP_WSBEiJ_G0027626.1 mouse_genomes_project 4 85786448 85788450 - Plin2 protein_coding processed_transcript MGP_WSBEiJ_T0065084.1 MGP_WSBEiJ_G0027626.1 mouse_genomes_project 4 85789422 85794901 - MGP_WSBEiJ_P0065084 Plin2 protein_coding protein_coding MGP_WSBEiJ_T0065085.1 MGP_WSBEiJ_G0027626.1 mouse_genomes_project 4 85791231 85799530 - MGP_WSBEiJ_P0065085 Plin2 protein_coding protein_coding MGP_WSBEiJ_T0065086.1 MGP_WSBEiJ_G0027626.1 mouse_genomes_project 4 85791231 85799738 - MGP_WSBEiJ_P0065086 Plin2 protein_coding protein_coding MGP_WSBEiJ_T0065087.1 MGP_WSBEiJ_G0027626.1 mouse_genomes_project 4 85797634 85799956 - Plin2 protein_coding processed_transcript MGP_WSBEiJ_T0007727.1 MGP_WSBEiJ_G0006320.1 mouse_genomes_project 4 52322277 52322775 - lincRNA lincRNA MGP_WSBEiJ_T0010404.1 MGP_WSBEiJ_G0008561.1 mouse_genomes_project 4 19595344 19595447 + Gm24078 miRNA miRNA MGP_WSBEiJ_T0004454.1 MGP_WSBEiJ_G0003869.1 mouse_genomes_project 4 125252395 125256286 - 1700125G02Rik antisense antisense MGP_WSBEiJ_T0014099.1 MGP_WSBEiJ_G0012229.1 mouse_genomes_project 4 35449706 35450135 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063857.1 MGP_WSBEiJ_G0027352.1 mouse_genomes_project 4 30514103 30713554 + MGP_WSBEiJ_P0063857 Rngtt protein_coding protein_coding MGP_WSBEiJ_T0063858.1 MGP_WSBEiJ_G0027352.1 mouse_genomes_project 4 30514120 30711854 + MGP_WSBEiJ_P0063858 Rngtt protein_coding protein_coding MGP_WSBEiJ_T0063859.1 MGP_WSBEiJ_G0027352.1 mouse_genomes_project 4 30526894 30530698 + Rngtt protein_coding processed_transcript MGP_WSBEiJ_T0063860.1 MGP_WSBEiJ_G0027352.1 mouse_genomes_project 4 30529557 30543519 + Rngtt protein_coding processed_transcript MGP_WSBEiJ_T0063861.1 MGP_WSBEiJ_G0027352.1 mouse_genomes_project 4 30535390 30562199 + Rngtt protein_coding processed_transcript MGP_WSBEiJ_T0066277.1 MGP_WSBEiJ_G0027896.1 mouse_genomes_project 4 119144547 119173785 + MGP_WSBEiJ_P0066277 Slc2a1 protein_coding protein_coding MGP_WSBEiJ_T0066278.1 MGP_WSBEiJ_G0027896.1 mouse_genomes_project 4 119144640 119168405 + MGP_WSBEiJ_P0066278 Slc2a1 protein_coding protein_coding MGP_WSBEiJ_T0066279.1 MGP_WSBEiJ_G0027896.1 mouse_genomes_project 4 119144695 119168377 + MGP_WSBEiJ_P0066279 Slc2a1 protein_coding protein_coding MGP_WSBEiJ_T0066280.1 MGP_WSBEiJ_G0027896.1 mouse_genomes_project 4 119144750 119173132 + MGP_WSBEiJ_P0066280 Slc2a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010400.1 MGP_WSBEiJ_G0008557.1 mouse_genomes_project 4 7811097 7811183 + Mir684-2 miRNA miRNA MGP_WSBEiJ_T0098296.1 MGP_WSBEiJ_G0036959.1 mouse_genomes_project 4 127829639 127829742 - Gm22221 snRNA snRNA MGP_WSBEiJ_T0007877.1 MGP_WSBEiJ_G0006435.1 mouse_genomes_project 4 140779871 140783702 - 2700016F22Rik lincRNA lincRNA MGP_WSBEiJ_T0010440.1 MGP_WSBEiJ_G0008597.1 mouse_genomes_project 4 107907649 107907742 + Mir6397 miRNA miRNA MGP_WSBEiJ_T0066207.1 MGP_WSBEiJ_G0027872.1 mouse_genomes_project 4 118102404 118147876 - MGP_WSBEiJ_P0066207 Kdm4a protein_coding protein_coding MGP_WSBEiJ_T0066208.1 MGP_WSBEiJ_G0027872.1 mouse_genomes_project 4 118102406 118147487 - MGP_WSBEiJ_P0066208 Kdm4a protein_coding protein_coding MGP_WSBEiJ_T0066209.1 MGP_WSBEiJ_G0027872.1 mouse_genomes_project 4 118102453 118147811 - MGP_WSBEiJ_P0066209 Kdm4a protein_coding protein_coding MGP_WSBEiJ_T0066210.1 MGP_WSBEiJ_G0027872.1 mouse_genomes_project 4 118108530 118147779 - MGP_WSBEiJ_P0066210 Kdm4a protein_coding protein_coding MGP_WSBEiJ_T0066211.1 MGP_WSBEiJ_G0027872.1 mouse_genomes_project 4 118112270 118113245 - Kdm4a protein_coding processed_transcript MGP_WSBEiJ_T0066212.1 MGP_WSBEiJ_G0027872.1 mouse_genomes_project 4 118115536 118128307 - Kdm4a protein_coding processed_transcript MGP_WSBEiJ_T0066376.1 MGP_WSBEiJ_G0027916.1 mouse_genomes_project 4 120359586 120380869 - MGP_WSBEiJ_P0066376 Foxo6 protein_coding protein_coding MGP_WSBEiJ_T0064565.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47657043 47663738 + MGP_WSBEiJ_P0064565 Rnf20 protein_coding protein_coding MGP_WSBEiJ_T0064566.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47657097 47681984 + MGP_WSBEiJ_P0064566 Rnf20 protein_coding protein_coding MGP_WSBEiJ_T0064567.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47657097 47675345 + MGP_WSBEiJ_P0064567 Rnf20 protein_coding protein_coding MGP_WSBEiJ_T0064568.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47657103 47681985 + MGP_WSBEiJ_P0064568 Rnf20 protein_coding protein_coding MGP_WSBEiJ_T0064569.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47657130 47669639 + MGP_WSBEiJ_P0064569 Rnf20 protein_coding protein_coding MGP_WSBEiJ_T0064570.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47657174 47665049 + Rnf20 protein_coding processed_transcript MGP_WSBEiJ_T0064571.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47657196 47667981 + Rnf20 protein_coding processed_transcript MGP_WSBEiJ_T0064572.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47666739 47673537 + Rnf20 protein_coding processed_transcript MGP_WSBEiJ_T0064573.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47675356 47677920 + Rnf20 protein_coding processed_transcript MGP_WSBEiJ_T0064574.1 MGP_WSBEiJ_G0027503.1 mouse_genomes_project 4 47676061 47677644 + Rnf20 protein_coding processed_transcript MGP_WSBEiJ_T0066397.1 MGP_WSBEiJ_G0027922.1 mouse_genomes_project 4 120827969 120879089 - MGP_WSBEiJ_P0066397 Kcnq4 protein_coding protein_coding MGP_WSBEiJ_T0066398.1 MGP_WSBEiJ_G0027922.1 mouse_genomes_project 4 120847079 120881598 - Kcnq4 protein_coding processed_transcript MGP_WSBEiJ_T0004440.1 MGP_WSBEiJ_G0003858.1 mouse_genomes_project 4 118633742 118636861 - Gm12853 antisense antisense MGP_WSBEiJ_T0067785.1 MGP_WSBEiJ_G0028241.1 mouse_genomes_project 4 142526060 142544089 + MGP_WSBEiJ_P0067785 Atp13a2 protein_coding protein_coding MGP_WSBEiJ_T0067786.1 MGP_WSBEiJ_G0028241.1 mouse_genomes_project 4 142526087 142546320 + Atp13a2 protein_coding retained_intron MGP_WSBEiJ_T0067787.1 MGP_WSBEiJ_G0028241.1 mouse_genomes_project 4 142526177 142537380 + Atp13a2 protein_coding retained_intron MGP_WSBEiJ_T0067788.1 MGP_WSBEiJ_G0028241.1 mouse_genomes_project 4 142526254 142546326 + MGP_WSBEiJ_P0067788 Atp13a2 protein_coding protein_coding MGP_WSBEiJ_T0067789.1 MGP_WSBEiJ_G0028241.1 mouse_genomes_project 4 142534814 142540935 + Atp13a2 protein_coding processed_transcript MGP_WSBEiJ_T0067790.1 MGP_WSBEiJ_G0028241.1 mouse_genomes_project 4 142535424 142539882 + Atp13a2 protein_coding processed_transcript MGP_WSBEiJ_T0067791.1 MGP_WSBEiJ_G0028241.1 mouse_genomes_project 4 142539719 142541091 + Atp13a2 protein_coding processed_transcript MGP_WSBEiJ_T0067792.1 MGP_WSBEiJ_G0028241.1 mouse_genomes_project 4 142543417 142545713 + Atp13a2 protein_coding retained_intron MGP_WSBEiJ_T0065946.1 MGP_WSBEiJ_G0027824.1 mouse_genomes_project 4 115863790 115885809 - MGP_WSBEiJ_P0065946 protein_coding protein_coding MGP_WSBEiJ_T0065947.1 MGP_WSBEiJ_G0027824.1 mouse_genomes_project 4 115863953 115880422 - MGP_WSBEiJ_P0065947 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065948.1 MGP_WSBEiJ_G0027824.1 mouse_genomes_project 4 115864860 115885313 - MGP_WSBEiJ_P0065948 protein_coding protein_coding MGP_WSBEiJ_T0065949.1 MGP_WSBEiJ_G0027824.1 mouse_genomes_project 4 115870794 115877385 - protein_coding processed_transcript MGP_WSBEiJ_T0065950.1 MGP_WSBEiJ_G0027824.1 mouse_genomes_project 4 115876153 115880291 - protein_coding retained_intron MGP_WSBEiJ_T0065951.1 MGP_WSBEiJ_G0027824.1 mouse_genomes_project 4 115880391 115881328 - protein_coding processed_transcript MGP_WSBEiJ_T0004506.1 MGP_WSBEiJ_G0003910.1 mouse_genomes_project 4 150084097 150085718 - Gm13201 antisense antisense MGP_WSBEiJ_T0004507.1 MGP_WSBEiJ_G0003910.1 mouse_genomes_project 4 150084312 150088343 - Gm13201 antisense antisense MGP_WSBEiJ_T0063722.1 MGP_WSBEiJ_G0027322.1 mouse_genomes_project 4 18587038 18596044 - MGP_WSBEiJ_P0063722 Tstd3 protein_coding protein_coding MGP_WSBEiJ_T0010413.1 MGP_WSBEiJ_G0008570.1 mouse_genomes_project 4 38308446 38308551 - Mir5123 miRNA miRNA MGP_WSBEiJ_T0064490.1 MGP_WSBEiJ_G0027481.1 mouse_genomes_project 4 44914381 44956978 - MGP_WSBEiJ_P0064490 Anks6 protein_coding protein_coding MGP_WSBEiJ_T0064491.1 MGP_WSBEiJ_G0027481.1 mouse_genomes_project 4 44914401 44956978 - MGP_WSBEiJ_P0064491 Anks6 protein_coding protein_coding MGP_WSBEiJ_T0064492.1 MGP_WSBEiJ_G0027481.1 mouse_genomes_project 4 44915712 44924441 - Anks6 protein_coding processed_transcript MGP_WSBEiJ_T0064493.1 MGP_WSBEiJ_G0027481.1 mouse_genomes_project 4 44937154 44938873 - Anks6 protein_coding processed_transcript MGP_WSBEiJ_T0067488.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137109635 137110173 - Rpl11 protein_coding processed_transcript MGP_WSBEiJ_T0067489.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137109635 137142008 - Rpl11 protein_coding processed_transcript MGP_WSBEiJ_T0067490.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137137694 137142013 - MGP_WSBEiJ_P0067490 Rpl11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067491.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137138070 137142716 - MGP_WSBEiJ_P0067491 Rpl11 protein_coding protein_coding MGP_WSBEiJ_T0067492.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137138286 137138866 - Rpl11 protein_coding processed_transcript MGP_WSBEiJ_T0067493.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137138329 137142319 - Rpl11 protein_coding processed_transcript MGP_WSBEiJ_T0067494.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137138619 137142413 - MGP_WSBEiJ_P0067494 Rpl11 protein_coding protein_coding MGP_WSBEiJ_T0067495.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137138671 137142077 - Rpl11 protein_coding processed_transcript MGP_WSBEiJ_T0067496.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137138972 137142029 - Rpl11 protein_coding processed_transcript MGP_WSBEiJ_T0067497.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137140349 137142039 - Rpl11 protein_coding processed_transcript MGP_WSBEiJ_T0067498.1 MGP_WSBEiJ_G0028166.1 mouse_genomes_project 4 137140562 137142751 - Rpl11 protein_coding processed_transcript MGP_WSBEiJ_T0068163.1 MGP_WSBEiJ_G0028337.1 mouse_genomes_project 4 151645146 151696837 + MGP_WSBEiJ_P0068163 Ctnnbip1 protein_coding protein_coding MGP_WSBEiJ_T0068164.1 MGP_WSBEiJ_G0028337.1 mouse_genomes_project 4 151671866 151694906 + MGP_WSBEiJ_P0068164 Ctnnbip1 protein_coding protein_coding MGP_WSBEiJ_T0066738.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129259187 129364793 + MGP_WSBEiJ_P0066738 Phc2 protein_coding protein_coding MGP_WSBEiJ_T0066739.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129259223 129320613 + MGP_WSBEiJ_P0066739 Phc2 protein_coding protein_coding MGP_WSBEiJ_T0066740.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129297344 129314046 + Phc2 protein_coding retained_intron MGP_WSBEiJ_T0066741.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129297401 129364793 + MGP_WSBEiJ_P0066741 Phc2 protein_coding protein_coding MGP_WSBEiJ_T0066742.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129318578 129335673 + Phc2 protein_coding retained_intron MGP_WSBEiJ_T0066743.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129338839 129364793 + MGP_WSBEiJ_P0066743 Phc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066744.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129338843 129364793 + MGP_WSBEiJ_P0066744 Phc2 protein_coding protein_coding MGP_WSBEiJ_T0066745.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129338940 129360129 + MGP_WSBEiJ_P0066745 Phc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066746.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129338968 129356920 + MGP_WSBEiJ_P0066746 Phc2 protein_coding protein_coding MGP_WSBEiJ_T0066747.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129339191 129359986 + MGP_WSBEiJ_P0066747 Phc2 protein_coding protein_coding MGP_WSBEiJ_T0066748.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129339229 129355383 + MGP_WSBEiJ_P0066748 Phc2 protein_coding protein_coding MGP_WSBEiJ_T0066749.1 MGP_WSBEiJ_G0028014.1 mouse_genomes_project 4 129339240 129359044 + MGP_WSBEiJ_P0066749 Phc2 protein_coding protein_coding MGP_WSBEiJ_T0064815.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61049358 61150336 + MGP_WSBEiJ_P0064815 Rgs3 protein_coding protein_coding MGP_WSBEiJ_T0064816.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61068603 61147942 + MGP_WSBEiJ_P0064816 Rgs3 protein_coding protein_coding MGP_WSBEiJ_T0064817.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61092228 61114501 + Rgs3 protein_coding processed_transcript MGP_WSBEiJ_T0064818.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61108473 61195100 + MGP_WSBEiJ_P0064818 Rgs3 protein_coding protein_coding MGP_WSBEiJ_T0064819.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61108535 61150336 + MGP_WSBEiJ_P0064819 Rgs3 protein_coding protein_coding MGP_WSBEiJ_T0064820.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61114115 61121873 + Rgs3 protein_coding processed_transcript MGP_WSBEiJ_T0064821.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61114293 61117126 + Rgs3 protein_coding retained_intron MGP_WSBEiJ_T0064822.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61124928 61190002 + Rgs3 protein_coding retained_intron MGP_WSBEiJ_T0064823.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61124928 61195100 + Rgs3 protein_coding retained_intron MGP_WSBEiJ_T0064824.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61143096 61150336 + Rgs3 protein_coding retained_intron MGP_WSBEiJ_T0064825.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61159377 61189570 + MGP_WSBEiJ_P0064825 Rgs3 protein_coding protein_coding MGP_WSBEiJ_T0064826.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61166036 61195100 + MGP_WSBEiJ_P0064826 Rgs3 protein_coding protein_coding MGP_WSBEiJ_T0064827.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61166352 61182035 + Rgs3 protein_coding processed_transcript MGP_WSBEiJ_T0064828.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61191546 61195100 + Rgs3 protein_coding retained_intron MGP_WSBEiJ_T0064829.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61191760 61193234 + Rgs3 protein_coding processed_transcript MGP_WSBEiJ_T0064830.1 MGP_WSBEiJ_G0027574.1 mouse_genomes_project 4 61191760 61196083 + MGP_WSBEiJ_P0064830 Rgs3 protein_coding protein_coding MGP_WSBEiJ_T0063570.1 MGP_WSBEiJ_G0027279.1 mouse_genomes_project 4 7720193 7748848 - MGP_WSBEiJ_P0063570 Ndufaf6 protein_coding protein_coding MGP_WSBEiJ_T0063571.1 MGP_WSBEiJ_G0027279.1 mouse_genomes_project 4 7720198 7726539 - Ndufaf6 protein_coding processed_transcript MGP_WSBEiJ_T0063572.1 MGP_WSBEiJ_G0027279.1 mouse_genomes_project 4 7720361 7748793 - Ndufaf6 protein_coding processed_transcript MGP_WSBEiJ_T0063573.1 MGP_WSBEiJ_G0027279.1 mouse_genomes_project 4 7726528 7748793 - Ndufaf6 protein_coding processed_transcript MGP_WSBEiJ_T0063574.1 MGP_WSBEiJ_G0027279.1 mouse_genomes_project 4 7729507 7748827 - Ndufaf6 protein_coding processed_transcript MGP_WSBEiJ_T0063575.1 MGP_WSBEiJ_G0027279.1 mouse_genomes_project 4 7742903 7748849 - Ndufaf6 protein_coding processed_transcript MGP_WSBEiJ_T0063576.1 MGP_WSBEiJ_G0027279.1 mouse_genomes_project 4 7745641 7748832 - Ndufaf6 protein_coding processed_transcript MGP_WSBEiJ_T0014202.1 MGP_WSBEiJ_G0012332.1 mouse_genomes_project 4 75770311 75770656 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063714.1 MGP_WSBEiJ_G0027321.1 mouse_genomes_project 4 18553911 18578527 + MGP_WSBEiJ_P0063714 Ccnc protein_coding protein_coding MGP_WSBEiJ_T0063715.1 MGP_WSBEiJ_G0027321.1 mouse_genomes_project 4 18553936 18578527 + MGP_WSBEiJ_P0063715 Ccnc protein_coding protein_coding MGP_WSBEiJ_T0063716.1 MGP_WSBEiJ_G0027321.1 mouse_genomes_project 4 18553936 18589594 + MGP_WSBEiJ_P0063716 Ccnc protein_coding protein_coding MGP_WSBEiJ_T0063717.1 MGP_WSBEiJ_G0027321.1 mouse_genomes_project 4 18553951 18566444 + Ccnc protein_coding processed_transcript MGP_WSBEiJ_T0063718.1 MGP_WSBEiJ_G0027321.1 mouse_genomes_project 4 18553963 18575915 + Ccnc protein_coding processed_transcript MGP_WSBEiJ_T0063719.1 MGP_WSBEiJ_G0027321.1 mouse_genomes_project 4 18553965 18575915 + MGP_WSBEiJ_P0063719 Ccnc protein_coding protein_coding MGP_WSBEiJ_T0063720.1 MGP_WSBEiJ_G0027321.1 mouse_genomes_project 4 18553968 18559619 + Ccnc protein_coding processed_transcript MGP_WSBEiJ_T0063721.1 MGP_WSBEiJ_G0027321.1 mouse_genomes_project 4 18553977 18576533 + Ccnc protein_coding processed_transcript MGP_WSBEiJ_T0098287.1 MGP_WSBEiJ_G0036950.1 mouse_genomes_project 4 117120934 117121050 + Gm23143 snRNA snRNA MGP_WSBEiJ_T0017488.1 MGP_WSBEiJ_G0014989.1 mouse_genomes_project 4 114586313 114599677 + Foxd2os processed_transcript processed_transcript MGP_WSBEiJ_T0017489.1 MGP_WSBEiJ_G0014989.1 mouse_genomes_project 4 114586313 114600304 + Foxd2os processed_transcript processed_transcript MGP_WSBEiJ_T0096825.1 MGP_WSBEiJ_G0035506.1 mouse_genomes_project 4 124203419 124204944 - pseudogene pseudogene MGP_WSBEiJ_T0066103.1 MGP_WSBEiJ_G0027853.1 mouse_genomes_project 4 117031649 117033208 + MGP_WSBEiJ_P0066103 Tctex1d4 protein_coding protein_coding MGP_WSBEiJ_T0066104.1 MGP_WSBEiJ_G0027853.1 mouse_genomes_project 4 117031668 117033610 + MGP_WSBEiJ_P0066104 Tctex1d4 protein_coding protein_coding MGP_WSBEiJ_T0066105.1 MGP_WSBEiJ_G0027853.1 mouse_genomes_project 4 117032029 117033387 + MGP_WSBEiJ_P0066105 Tctex1d4 protein_coding protein_coding MGP_WSBEiJ_T0007703.1 MGP_WSBEiJ_G0006300.1 mouse_genomes_project 4 27781812 27914255 + 4930556G01Rik lincRNA lincRNA MGP_WSBEiJ_T0063767.1 MGP_WSBEiJ_G0027330.1 mouse_genomes_project 4 21462022 21664699 - MGP_WSBEiJ_P0063767 Klhl32 protein_coding protein_coding MGP_WSBEiJ_T0063768.1 MGP_WSBEiJ_G0027330.1 mouse_genomes_project 4 21462022 21711387 - MGP_WSBEiJ_P0063768 Klhl32 protein_coding protein_coding MGP_WSBEiJ_T0063769.1 MGP_WSBEiJ_G0027330.1 mouse_genomes_project 4 21466000 21608900 - MGP_WSBEiJ_P0063769 Klhl32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063770.1 MGP_WSBEiJ_G0027330.1 mouse_genomes_project 4 21466089 21711194 - MGP_WSBEiJ_P0063770 Klhl32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063771.1 MGP_WSBEiJ_G0027330.1 mouse_genomes_project 4 21467307 21711349 - MGP_WSBEiJ_P0063771 Klhl32 protein_coding protein_coding MGP_WSBEiJ_T0063772.1 MGP_WSBEiJ_G0027330.1 mouse_genomes_project 4 21506045 21711194 - Klhl32 protein_coding retained_intron MGP_WSBEiJ_T0063773.1 MGP_WSBEiJ_G0027330.1 mouse_genomes_project 4 21506587 21530546 - Klhl32 protein_coding processed_transcript MGP_WSBEiJ_T0067074.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133076575 133095160 - MGP_WSBEiJ_P0067074 Trnau1ap protein_coding protein_coding MGP_WSBEiJ_T0067075.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133076575 133095111 - MGP_WSBEiJ_P0067075 Trnau1ap protein_coding protein_coding MGP_WSBEiJ_T0067076.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133076577 133095138 - Trnau1ap protein_coding retained_intron MGP_WSBEiJ_T0067077.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133076661 133095116 - Trnau1ap protein_coding processed_transcript MGP_WSBEiJ_T0067078.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133076677 133095011 - MGP_WSBEiJ_P0067078 Trnau1ap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067079.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133079019 133095036 - MGP_WSBEiJ_P0067079 Trnau1ap protein_coding protein_coding MGP_WSBEiJ_T0067080.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133079125 133095126 - MGP_WSBEiJ_P0067080 Trnau1ap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067081.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133079162 133095104 - Trnau1ap protein_coding processed_transcript MGP_WSBEiJ_T0067082.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133079165 133095160 - MGP_WSBEiJ_P0067082 Trnau1ap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067083.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133086826 133090895 - Trnau1ap protein_coding retained_intron MGP_WSBEiJ_T0067084.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133087304 133095160 - MGP_WSBEiJ_P0067084 Trnau1ap protein_coding protein_coding MGP_WSBEiJ_T0067085.1 MGP_WSBEiJ_G0028077.1 mouse_genomes_project 4 133093731 133095137 - Trnau1ap protein_coding retained_intron MGP_WSBEiJ_T0067608.1 MGP_WSBEiJ_G0028195.1 mouse_genomes_project 4 139123821 139184303 + MGP_WSBEiJ_P0067608 Ece1 protein_coding protein_coding MGP_WSBEiJ_T0067609.1 MGP_WSBEiJ_G0028195.1 mouse_genomes_project 4 139183919 139206472 + MGP_WSBEiJ_P0067609 Ece1 protein_coding protein_coding MGP_WSBEiJ_T0067610.1 MGP_WSBEiJ_G0028195.1 mouse_genomes_project 4 139184130 139196592 + Ece1 protein_coding processed_transcript MGP_WSBEiJ_T0067611.1 MGP_WSBEiJ_G0028195.1 mouse_genomes_project 4 139184174 139236583 + MGP_WSBEiJ_P0067611 Ece1 protein_coding protein_coding MGP_WSBEiJ_T0098258.1 MGP_WSBEiJ_G0036921.1 mouse_genomes_project 4 62125034 62125141 - Gm24448 snRNA snRNA MGP_WSBEiJ_T0068259.1 MGP_WSBEiJ_G0028356.1 mouse_genomes_project 4 153241834 153285554 - MGP_WSBEiJ_P0068259 Per3 protein_coding protein_coding MGP_WSBEiJ_T0068260.1 MGP_WSBEiJ_G0028356.1 mouse_genomes_project 4 153241968 153254352 - Per3 protein_coding processed_transcript MGP_WSBEiJ_T0068261.1 MGP_WSBEiJ_G0028356.1 mouse_genomes_project 4 153249658 153269716 - Per3 protein_coding retained_intron MGP_WSBEiJ_T0068262.1 MGP_WSBEiJ_G0028356.1 mouse_genomes_project 4 153249658 153285554 - MGP_WSBEiJ_P0068262 Per3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068263.1 MGP_WSBEiJ_G0028356.1 mouse_genomes_project 4 153262395 153285554 - Per3 protein_coding retained_intron MGP_WSBEiJ_T0001379.1 MGP_WSBEiJ_G0001308.1 mouse_genomes_project 4 99025514 99030316 + TEC TEC MGP_WSBEiJ_T0014188.1 MGP_WSBEiJ_G0012318.1 mouse_genomes_project 4 72967312 72968648 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067568.1 MGP_WSBEiJ_G0028191.1 mouse_genomes_project 4 138787014 138789494 - MGP_WSBEiJ_P0067568 Ldlrad2 protein_coding protein_coding MGP_WSBEiJ_T0004520.1 MGP_WSBEiJ_G0003920.1 mouse_genomes_project 4 151897351 151898278 + Gm13068 antisense antisense MGP_WSBEiJ_T0004521.1 MGP_WSBEiJ_G0003920.1 mouse_genomes_project 4 151897351 151898403 + Gm13068 antisense antisense MGP_WSBEiJ_T0004509.1 MGP_WSBEiJ_G0003912.1 mouse_genomes_project 4 151010047 151010862 - Gm15969 antisense antisense MGP_WSBEiJ_T0007886.1 MGP_WSBEiJ_G0006443.1 mouse_genomes_project 4 142197315 142202945 + Gm13025 lincRNA lincRNA MGP_WSBEiJ_T0065869.1 MGP_WSBEiJ_G0027803.1 mouse_genomes_project 4 114640657 114668793 - MGP_WSBEiJ_P0065869 Cmpk1 protein_coding protein_coding MGP_WSBEiJ_T0065870.1 MGP_WSBEiJ_G0027803.1 mouse_genomes_project 4 114645263 114668701 - MGP_WSBEiJ_P0065870 Cmpk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065871.1 MGP_WSBEiJ_G0027803.1 mouse_genomes_project 4 114651193 114668624 - MGP_WSBEiJ_P0065871 Cmpk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065872.1 MGP_WSBEiJ_G0027803.1 mouse_genomes_project 4 114666369 114668701 - Cmpk1 protein_coding processed_transcript MGP_WSBEiJ_T0066717.1 MGP_WSBEiJ_G0028006.1 mouse_genomes_project 4 127872398 127876321 - MGP_WSBEiJ_P0066717 Gjb3 protein_coding protein_coding MGP_WSBEiJ_T0066718.1 MGP_WSBEiJ_G0028006.1 mouse_genomes_project 4 127872398 127878004 - MGP_WSBEiJ_P0066718 Gjb3 protein_coding protein_coding MGP_WSBEiJ_T0007697.1 MGP_WSBEiJ_G0006294.1 mouse_genomes_project 4 20800999 20801474 - Gm28448 lincRNA lincRNA MGP_WSBEiJ_T0067060.1 MGP_WSBEiJ_G0028071.1 mouse_genomes_project 4 132805050 132807346 + MGP_WSBEiJ_P0067060 Gm10300 protein_coding protein_coding MGP_WSBEiJ_T0014362.1 MGP_WSBEiJ_G0012492.1 mouse_genomes_project 4 135143255 135143576 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068012.1 MGP_WSBEiJ_G0028309.1 mouse_genomes_project 4 150010729 150051630 - MGP_WSBEiJ_P0068012 Clcn6 protein_coding protein_coding MGP_WSBEiJ_T0068013.1 MGP_WSBEiJ_G0028309.1 mouse_genomes_project 4 150012618 150051622 - MGP_WSBEiJ_P0068013 Clcn6 protein_coding protein_coding MGP_WSBEiJ_T0068014.1 MGP_WSBEiJ_G0028309.1 mouse_genomes_project 4 150013073 150051579 - MGP_WSBEiJ_P0068014 Clcn6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068015.1 MGP_WSBEiJ_G0028309.1 mouse_genomes_project 4 150031590 150051572 - Clcn6 protein_coding processed_transcript MGP_WSBEiJ_T0068016.1 MGP_WSBEiJ_G0028309.1 mouse_genomes_project 4 150033558 150051371 - MGP_WSBEiJ_P0068016 Clcn6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068420.1 MGP_WSBEiJ_G0028383.1 mouse_genomes_project 4 156479868 156489608 + MGP_WSBEiJ_P0068420 Lrrc47 protein_coding protein_coding MGP_WSBEiJ_T0068421.1 MGP_WSBEiJ_G0028383.1 mouse_genomes_project 4 156479940 156489607 + MGP_WSBEiJ_P0068421 Lrrc47 protein_coding protein_coding MGP_WSBEiJ_T0068422.1 MGP_WSBEiJ_G0028383.1 mouse_genomes_project 4 156485469 156487110 + Lrrc47 protein_coding retained_intron MGP_WSBEiJ_T0068423.1 MGP_WSBEiJ_G0028383.1 mouse_genomes_project 4 156486992 156488986 + MGP_WSBEiJ_P0068423 Lrrc47 protein_coding protein_coding MGP_WSBEiJ_T0068424.1 MGP_WSBEiJ_G0028383.1 mouse_genomes_project 4 156487678 156488762 + MGP_WSBEiJ_P0068424 Lrrc47 protein_coding protein_coding MGP_WSBEiJ_T0067260.1 MGP_WSBEiJ_G0028116.1 mouse_genomes_project 4 134925057 134944559 - MGP_WSBEiJ_P0067260 Lin28a protein_coding protein_coding MGP_WSBEiJ_T0067261.1 MGP_WSBEiJ_G0028116.1 mouse_genomes_project 4 134927980 134935971 - MGP_WSBEiJ_P0067261 Lin28a protein_coding protein_coding MGP_WSBEiJ_T0067262.1 MGP_WSBEiJ_G0028116.1 mouse_genomes_project 4 134927986 134933018 - MGP_WSBEiJ_P0067262 Lin28a protein_coding protein_coding MGP_WSBEiJ_T0067263.1 MGP_WSBEiJ_G0028116.1 mouse_genomes_project 4 134929608 134944100 - MGP_WSBEiJ_P0067263 Lin28a protein_coding protein_coding MGP_WSBEiJ_T0066521.1 MGP_WSBEiJ_G0027957.1 mouse_genomes_project 4 124952269 124953142 - MGP_WSBEiJ_P0066521 3100002H09Rik protein_coding protein_coding MGP_WSBEiJ_T0097053.1 MGP_WSBEiJ_G0035734.1 mouse_genomes_project 4 57315433 57315518 + Gm26400 rRNA rRNA MGP_WSBEiJ_T0099542.1 MGP_WSBEiJ_G0038205.1 mouse_genomes_project 4 90332890 90333022 - Gm25244 snoRNA snoRNA MGP_WSBEiJ_T0010420.1 MGP_WSBEiJ_G0008577.1 mouse_genomes_project 4 42601289 42601414 + Gm22639 miRNA miRNA MGP_WSBEiJ_T0063612.1 MGP_WSBEiJ_G0027286.1 mouse_genomes_project 4 8253073 8291767 + Rad54b protein_coding processed_transcript MGP_WSBEiJ_T0063613.1 MGP_WSBEiJ_G0027286.1 mouse_genomes_project 4 8253093 8283794 + MGP_WSBEiJ_P0063613 Rad54b protein_coding protein_coding MGP_WSBEiJ_T0063614.1 MGP_WSBEiJ_G0027286.1 mouse_genomes_project 4 8253100 8275417 + MGP_WSBEiJ_P0063614 Rad54b protein_coding protein_coding MGP_WSBEiJ_T0063615.1 MGP_WSBEiJ_G0027286.1 mouse_genomes_project 4 8253123 8315861 + MGP_WSBEiJ_P0063615 Rad54b protein_coding protein_coding MGP_WSBEiJ_T0063616.1 MGP_WSBEiJ_G0027286.1 mouse_genomes_project 4 8273102 8293894 + Rad54b protein_coding processed_transcript MGP_WSBEiJ_T0063618.1 MGP_WSBEiJ_G0027286.1 mouse_genomes_project 4 8293993 8305345 + MGP_WSBEiJ_P0063618 Rad54b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063619.1 MGP_WSBEiJ_G0027286.1 mouse_genomes_project 4 8308575 8309980 + Rad54b protein_coding retained_intron MGP_WSBEiJ_T0064582.1 MGP_WSBEiJ_G0027507.1 mouse_genomes_project 4 50531995 50583630 + MGP_WSBEiJ_P0064582 Smc2 protein_coding protein_coding MGP_WSBEiJ_T0064583.1 MGP_WSBEiJ_G0027507.1 mouse_genomes_project 4 50531995 50583630 + MGP_WSBEiJ_P0064583 Smc2 protein_coding protein_coding MGP_WSBEiJ_T0064584.1 MGP_WSBEiJ_G0027507.1 mouse_genomes_project 4 50532004 50541546 + Smc2 protein_coding processed_transcript MGP_WSBEiJ_T0064585.1 MGP_WSBEiJ_G0027507.1 mouse_genomes_project 4 50532018 50545088 + Smc2 protein_coding processed_transcript MGP_WSBEiJ_T0064586.1 MGP_WSBEiJ_G0027507.1 mouse_genomes_project 4 50532021 50552418 + MGP_WSBEiJ_P0064586 Smc2 protein_coding protein_coding MGP_WSBEiJ_T0067345.1 MGP_WSBEiJ_G0028134.1 mouse_genomes_project 4 135432526 135438258 + MGP_WSBEiJ_P0067345 Stmn1 protein_coding protein_coding MGP_WSBEiJ_T0067346.1 MGP_WSBEiJ_G0028134.1 mouse_genomes_project 4 135432605 135434894 + Stmn1 protein_coding processed_transcript MGP_WSBEiJ_T0067347.1 MGP_WSBEiJ_G0028134.1 mouse_genomes_project 4 135432612 135437343 + MGP_WSBEiJ_P0067347 Stmn1 protein_coding protein_coding MGP_WSBEiJ_T0067348.1 MGP_WSBEiJ_G0028134.1 mouse_genomes_project 4 135432615 135438083 + MGP_WSBEiJ_P0067348 Stmn1 protein_coding protein_coding MGP_WSBEiJ_T0067349.1 MGP_WSBEiJ_G0028134.1 mouse_genomes_project 4 135433953 135437918 + MGP_WSBEiJ_P0067349 Stmn1 protein_coding protein_coding MGP_WSBEiJ_T0067171.1 MGP_WSBEiJ_G0028096.1 mouse_genomes_project 4 134045804 134048324 - MGP_WSBEiJ_P0067171 Gpr3 protein_coding protein_coding MGP_WSBEiJ_T0067172.1 MGP_WSBEiJ_G0028096.1 mouse_genomes_project 4 134046833 134049002 - MGP_WSBEiJ_P0067172 Gpr3 protein_coding protein_coding MGP_WSBEiJ_T0067173.1 MGP_WSBEiJ_G0028096.1 mouse_genomes_project 4 134047536 134048780 - MGP_WSBEiJ_P0067173 Gpr3 protein_coding protein_coding MGP_WSBEiJ_T0066569.1 MGP_WSBEiJ_G0027972.1 mouse_genomes_project 4 125441549 125448882 + MGP_WSBEiJ_P0066569 Snip1 protein_coding protein_coding MGP_WSBEiJ_T0066570.1 MGP_WSBEiJ_G0027972.1 mouse_genomes_project 4 125441579 125446138 + Snip1 protein_coding processed_transcript MGP_WSBEiJ_T0063887.1 MGP_WSBEiJ_G0027358.1 mouse_genomes_project 4 31916778 31941844 - MGP_WSBEiJ_P0063887 Slc35a1 protein_coding protein_coding MGP_WSBEiJ_T0063888.1 MGP_WSBEiJ_G0027358.1 mouse_genomes_project 4 31917432 31937868 - Slc35a1 protein_coding processed_transcript MGP_WSBEiJ_T0063889.1 MGP_WSBEiJ_G0027358.1 mouse_genomes_project 4 31923043 31937775 - MGP_WSBEiJ_P0063889 Slc35a1 protein_coding protein_coding MGP_WSBEiJ_T0063890.1 MGP_WSBEiJ_G0027358.1 mouse_genomes_project 4 31929381 31941661 - Slc35a1 protein_coding processed_transcript MGP_WSBEiJ_T0063891.1 MGP_WSBEiJ_G0027358.1 mouse_genomes_project 4 31937746 31941802 - Slc35a1 protein_coding processed_transcript MGP_WSBEiJ_T0067196.1 MGP_WSBEiJ_G0028102.1 mouse_genomes_project 4 134226689 134282953 + MGP_WSBEiJ_P0067196 Slc9a1 protein_coding protein_coding MGP_WSBEiJ_T0067197.1 MGP_WSBEiJ_G0028102.1 mouse_genomes_project 4 134227627 134271546 + Slc9a1 protein_coding processed_transcript MGP_WSBEiJ_T0067198.1 MGP_WSBEiJ_G0028102.1 mouse_genomes_project 4 134275718 134279829 + Slc9a1 protein_coding processed_transcript MGP_WSBEiJ_T0067199.1 MGP_WSBEiJ_G0028102.1 mouse_genomes_project 4 134278760 134279445 + Slc9a1 protein_coding processed_transcript MGP_WSBEiJ_T0067200.1 MGP_WSBEiJ_G0028102.1 mouse_genomes_project 4 134279251 134281594 + Slc9a1 protein_coding processed_transcript MGP_WSBEiJ_T0066251.1 MGP_WSBEiJ_G0027881.1 mouse_genomes_project 4 118532001 118534783 - MGP_WSBEiJ_P0066251 Tmem125 protein_coding protein_coding MGP_WSBEiJ_T0066252.1 MGP_WSBEiJ_G0027881.1 mouse_genomes_project 4 118532919 118535099 - MGP_WSBEiJ_P0066252 Tmem125 protein_coding protein_coding MGP_WSBEiJ_T0066253.1 MGP_WSBEiJ_G0027881.1 mouse_genomes_project 4 118533077 118534017 - MGP_WSBEiJ_P0066253 Tmem125 protein_coding protein_coding MGP_WSBEiJ_T0066254.1 MGP_WSBEiJ_G0027881.1 mouse_genomes_project 4 118533127 118534344 - MGP_WSBEiJ_P0066254 Tmem125 protein_coding protein_coding MGP_WSBEiJ_T0066255.1 MGP_WSBEiJ_G0027881.1 mouse_genomes_project 4 118533656 118534304 - Tmem125 protein_coding processed_transcript MGP_WSBEiJ_T0004435.1 MGP_WSBEiJ_G0003854.1 mouse_genomes_project 4 117223421 117225330 + Gm12843 antisense antisense MGP_WSBEiJ_T0004436.1 MGP_WSBEiJ_G0003854.1 mouse_genomes_project 4 117223748 117224978 + Gm12843 antisense antisense MGP_WSBEiJ_T0063451.1 MGP_WSBEiJ_G0027255.1 mouse_genomes_project 4 144774 185684 + MGP_WSBEiJ_P0063451 Tgs1 protein_coding protein_coding MGP_WSBEiJ_T0063452.1 MGP_WSBEiJ_G0027255.1 mouse_genomes_project 4 144849 153831 + Tgs1 protein_coding retained_intron MGP_WSBEiJ_T0063453.1 MGP_WSBEiJ_G0027255.1 mouse_genomes_project 4 163485 168506 + Tgs1 protein_coding processed_transcript MGP_WSBEiJ_T0063454.1 MGP_WSBEiJ_G0027255.1 mouse_genomes_project 4 168453 172492 + Tgs1 protein_coding retained_intron MGP_WSBEiJ_T0063455.1 MGP_WSBEiJ_G0027255.1 mouse_genomes_project 4 175577 184348 + Tgs1 protein_coding retained_intron MGP_WSBEiJ_T0100845.1 MGP_WSBEiJ_G0039303.1 mouse_genomes_project 4 145198392 145198893 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014030.1 MGP_WSBEiJ_G0012160.1 mouse_genomes_project 4 13871403 13871872 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007863.1 MGP_WSBEiJ_G0006424.1 mouse_genomes_project 4 133117306 133118917 + Gm17300 lincRNA lincRNA MGP_WSBEiJ_T0067294.1 MGP_WSBEiJ_G0028122.1 mouse_genomes_project 4 135077076 135129479 - MGP_WSBEiJ_P0067294 Cep85 protein_coding protein_coding MGP_WSBEiJ_T0067295.1 MGP_WSBEiJ_G0028122.1 mouse_genomes_project 4 135077084 135129348 - MGP_WSBEiJ_P0067295 Cep85 protein_coding protein_coding MGP_WSBEiJ_T0067296.1 MGP_WSBEiJ_G0028122.1 mouse_genomes_project 4 135078313 135082441 - Cep85 protein_coding processed_transcript MGP_WSBEiJ_T0067297.1 MGP_WSBEiJ_G0028122.1 mouse_genomes_project 4 135082030 135089065 - Cep85 protein_coding retained_intron MGP_WSBEiJ_T0067298.1 MGP_WSBEiJ_G0028122.1 mouse_genomes_project 4 135099062 135101276 - Cep85 protein_coding retained_intron MGP_WSBEiJ_T0067299.1 MGP_WSBEiJ_G0028122.1 mouse_genomes_project 4 135102699 135103722 - Cep85 protein_coding processed_transcript MGP_WSBEiJ_T0067300.1 MGP_WSBEiJ_G0028122.1 mouse_genomes_project 4 135102895 135129452 - MGP_WSBEiJ_P0067300 Cep85 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067301.1 MGP_WSBEiJ_G0028122.1 mouse_genomes_project 4 135113986 135129418 - Cep85 protein_coding retained_intron MGP_WSBEiJ_T0001370.1 MGP_WSBEiJ_G0001299.1 mouse_genomes_project 4 5061493 5065769 - TEC TEC MGP_WSBEiJ_T0004519.1 MGP_WSBEiJ_G0003919.1 mouse_genomes_project 4 151696019 151699498 - Gm13066 antisense antisense MGP_WSBEiJ_T0098282.1 MGP_WSBEiJ_G0036945.1 mouse_genomes_project 4 114518523 114518656 - Gm23230 snRNA snRNA MGP_WSBEiJ_T0010408.1 MGP_WSBEiJ_G0008565.1 mouse_genomes_project 4 30648153 30648282 + Mir8118 miRNA miRNA MGP_WSBEiJ_T0067218.1 MGP_WSBEiJ_G0028110.1 mouse_genomes_project 4 134495312 134524718 - MGP_WSBEiJ_P0067218 Zdhhc18 protein_coding protein_coding MGP_WSBEiJ_T0067219.1 MGP_WSBEiJ_G0028110.1 mouse_genomes_project 4 134498676 134505610 - Zdhhc18 protein_coding retained_intron MGP_WSBEiJ_T0067220.1 MGP_WSBEiJ_G0028110.1 mouse_genomes_project 4 134498746 134503061 - Zdhhc18 protein_coding processed_transcript MGP_WSBEiJ_T0067221.1 MGP_WSBEiJ_G0028110.1 mouse_genomes_project 4 134503342 134505385 - Zdhhc18 protein_coding retained_intron MGP_WSBEiJ_T0067222.1 MGP_WSBEiJ_G0028110.1 mouse_genomes_project 4 134518729 134540006 - Zdhhc18 protein_coding processed_transcript MGP_WSBEiJ_T0014133.1 MGP_WSBEiJ_G0012263.1 mouse_genomes_project 4 50332000 50332621 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014385.1 MGP_WSBEiJ_G0012515.1 mouse_genomes_project 4 145191588 145194505 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004375.1 MGP_WSBEiJ_G0003811.1 mouse_genomes_project 4 44138028 44184979 - Gm12446 antisense antisense MGP_WSBEiJ_T0004376.1 MGP_WSBEiJ_G0003811.1 mouse_genomes_project 4 44170188 44188023 - Gm12446 antisense antisense MGP_WSBEiJ_T0066631.1 MGP_WSBEiJ_G0027986.1 mouse_genomes_project 4 126757851 126785843 + MGP_WSBEiJ_P0066631 Col8a2 protein_coding protein_coding MGP_WSBEiJ_T0066632.1 MGP_WSBEiJ_G0027986.1 mouse_genomes_project 4 126771633 126781303 + MGP_WSBEiJ_P0066632 Col8a2 protein_coding protein_coding MGP_WSBEiJ_T0014205.1 MGP_WSBEiJ_G0012335.1 mouse_genomes_project 4 78831092 78831495 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098314.1 MGP_WSBEiJ_G0036977.1 mouse_genomes_project 4 150618809 150618917 + Gm23318 snRNA snRNA MGP_WSBEiJ_T0004381.1 MGP_WSBEiJ_G0003816.1 mouse_genomes_project 4 55442806 55447290 + Gm12530 antisense antisense MGP_WSBEiJ_T0065726.1 MGP_WSBEiJ_G0027778.1 mouse_genomes_project 4 108738341 108805843 + MGP_WSBEiJ_P0065726 Rab3b protein_coding protein_coding MGP_WSBEiJ_T0065727.1 MGP_WSBEiJ_G0027778.1 mouse_genomes_project 4 108738478 108803704 + MGP_WSBEiJ_P0065727 Rab3b protein_coding protein_coding MGP_WSBEiJ_T0065728.1 MGP_WSBEiJ_G0027778.1 mouse_genomes_project 4 108748350 108803707 + MGP_WSBEiJ_P0065728 Rab3b protein_coding protein_coding MGP_WSBEiJ_T0065729.1 MGP_WSBEiJ_G0027778.1 mouse_genomes_project 4 108801618 108803424 + Rab3b protein_coding processed_transcript MGP_WSBEiJ_T0017467.1 MGP_WSBEiJ_G0014974.1 mouse_genomes_project 4 84599059 84883151 + processed_transcript processed_transcript MGP_WSBEiJ_T0068637.1 MGP_WSBEiJ_G0028421.1 mouse_genomes_project 4 158373109 158378687 - MGP_WSBEiJ_P0068637 Tmem88b protein_coding protein_coding MGP_WSBEiJ_T0098262.1 MGP_WSBEiJ_G0036925.1 mouse_genomes_project 4 82301339 82301446 - Gm23412 snRNA snRNA MGP_WSBEiJ_T0067965.1 MGP_WSBEiJ_G0028296.1 mouse_genomes_project 4 146687077 146716345 + Dhrs3 protein_coding processed_transcript MGP_WSBEiJ_T0067966.1 MGP_WSBEiJ_G0028296.1 mouse_genomes_project 4 146687083 146716271 + MGP_WSBEiJ_P0067966 Dhrs3 protein_coding protein_coding MGP_WSBEiJ_T0067967.1 MGP_WSBEiJ_G0028296.1 mouse_genomes_project 4 146687165 146725223 + MGP_WSBEiJ_P0067967 Dhrs3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067968.1 MGP_WSBEiJ_G0028296.1 mouse_genomes_project 4 146687461 146725233 + MGP_WSBEiJ_P0067968 Dhrs3 protein_coding protein_coding MGP_WSBEiJ_T0067969.1 MGP_WSBEiJ_G0028296.1 mouse_genomes_project 4 146715247 146716345 + Dhrs3 protein_coding retained_intron MGP_WSBEiJ_T0068645.1 MGP_WSBEiJ_G0028424.1 mouse_genomes_project 4 158405520 158419278 + MGP_WSBEiJ_P0068645 Ccnl2 protein_coding protein_coding MGP_WSBEiJ_T0068646.1 MGP_WSBEiJ_G0028424.1 mouse_genomes_project 4 158405532 158419278 + Ccnl2 protein_coding retained_intron MGP_WSBEiJ_T0068647.1 MGP_WSBEiJ_G0028424.1 mouse_genomes_project 4 158405550 158416579 + Ccnl2 protein_coding retained_intron MGP_WSBEiJ_T0068648.1 MGP_WSBEiJ_G0028424.1 mouse_genomes_project 4 158405809 158408851 + Ccnl2 protein_coding retained_intron MGP_WSBEiJ_T0068649.1 MGP_WSBEiJ_G0028424.1 mouse_genomes_project 4 158406489 158419038 + MGP_WSBEiJ_P0068649 Ccnl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067769.1 MGP_WSBEiJ_G0028235.1 mouse_genomes_project 4 142256080 142274199 - MGP_WSBEiJ_P0067769 Padi6 protein_coding protein_coding MGP_WSBEiJ_T0067770.1 MGP_WSBEiJ_G0028235.1 mouse_genomes_project 4 142260978 142261702 - Padi6 protein_coding processed_transcript MGP_WSBEiJ_T0067771.1 MGP_WSBEiJ_G0028235.1 mouse_genomes_project 4 142265646 142271448 - MGP_WSBEiJ_P0067771 Padi6 protein_coding protein_coding MGP_WSBEiJ_T0063950.1 MGP_WSBEiJ_G0027374.1 mouse_genomes_project 4 37913035 37922224 + MGP_WSBEiJ_P0063950 Tmem215 protein_coding protein_coding MGP_WSBEiJ_T0063951.1 MGP_WSBEiJ_G0027374.1 mouse_genomes_project 4 37913985 37916471 + MGP_WSBEiJ_P0063951 Tmem215 protein_coding protein_coding MGP_WSBEiJ_T0014143.1 MGP_WSBEiJ_G0012273.1 mouse_genomes_project 4 52821437 52822005 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014120.1 MGP_WSBEiJ_G0012250.1 mouse_genomes_project 4 44940328 44940691 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098245.1 MGP_WSBEiJ_G0036908.1 mouse_genomes_project 4 37442361 37442423 - Gm26087 snRNA snRNA MGP_WSBEiJ_T0099526.1 MGP_WSBEiJ_G0038189.1 mouse_genomes_project 4 55148970 55149103 - Gm25053 snoRNA snoRNA MGP_WSBEiJ_T0063542.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6118606 6142026 - Asph protein_coding processed_transcript MGP_WSBEiJ_T0063543.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6119616 6330244 - MGP_WSBEiJ_P0063543 Asph protein_coding protein_coding MGP_WSBEiJ_T0063544.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6119616 6330244 - MGP_WSBEiJ_P0063544 Asph protein_coding protein_coding MGP_WSBEiJ_T0063545.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6119616 6330426 - MGP_WSBEiJ_P0063545 Asph protein_coding protein_coding MGP_WSBEiJ_T0063546.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6246720 6257986 - Asph protein_coding processed_transcript MGP_WSBEiJ_T0063547.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6247091 6304832 - MGP_WSBEiJ_P0063547 Asph protein_coding protein_coding MGP_WSBEiJ_T0063548.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6247091 6330244 - MGP_WSBEiJ_P0063548 Asph protein_coding protein_coding MGP_WSBEiJ_T0063549.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6247091 6330244 - MGP_WSBEiJ_P0063549 Asph protein_coding protein_coding MGP_WSBEiJ_T0063550.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6247091 6304832 - MGP_WSBEiJ_P0063550 Asph protein_coding protein_coding MGP_WSBEiJ_T0063551.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6247091 6304832 - MGP_WSBEiJ_P0063551 Asph protein_coding protein_coding MGP_WSBEiJ_T0063552.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6266404 6300376 - Asph protein_coding processed_transcript MGP_WSBEiJ_T0063553.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6269708 6304832 - MGP_WSBEiJ_P0063553 Asph protein_coding protein_coding MGP_WSBEiJ_T0063554.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6272759 6330244 - MGP_WSBEiJ_P0063554 Asph protein_coding protein_coding MGP_WSBEiJ_T0063555.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6281983 6304832 - MGP_WSBEiJ_P0063555 Asph protein_coding protein_coding MGP_WSBEiJ_T0063556.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6282770 6330244 - MGP_WSBEiJ_P0063556 Asph protein_coding protein_coding MGP_WSBEiJ_T0063557.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6290147 6330244 - MGP_WSBEiJ_P0063557 Asph protein_coding protein_coding MGP_WSBEiJ_T0063558.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6291677 6330244 - MGP_WSBEiJ_P0063558 Asph protein_coding protein_coding MGP_WSBEiJ_T0063559.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6292056 6330403 - MGP_WSBEiJ_P0063559 Asph protein_coding protein_coding MGP_WSBEiJ_T0063560.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6294246 6304832 - Asph protein_coding processed_transcript MGP_WSBEiJ_T0063561.1 MGP_WSBEiJ_G0027275.1 mouse_genomes_project 4 6329394 6330168 - Asph protein_coding processed_transcript MGP_WSBEiJ_T0010421.1 MGP_WSBEiJ_G0008578.1 mouse_genomes_project 4 43297863 43297931 - Gm22518 miRNA miRNA MGP_WSBEiJ_T0064326.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41819621 41859070 - MGP_WSBEiJ_P0064326 Rnf38 protein_coding protein_coding MGP_WSBEiJ_T0064327.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41819624 41858788 - MGP_WSBEiJ_P0064327 Rnf38 protein_coding protein_coding MGP_WSBEiJ_T0064328.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41822832 41850394 - MGP_WSBEiJ_P0064328 Rnf38 protein_coding protein_coding MGP_WSBEiJ_T0064329.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41822836 41859110 - MGP_WSBEiJ_P0064329 Rnf38 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064330.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41822918 41832326 - Rnf38 protein_coding processed_transcript MGP_WSBEiJ_T0064331.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41822920 41832205 - Rnf38 protein_coding processed_transcript MGP_WSBEiJ_T0064332.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41833801 41859659 - MGP_WSBEiJ_P0064332 Rnf38 protein_coding protein_coding MGP_WSBEiJ_T0064333.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41833855 41850505 - MGP_WSBEiJ_P0064333 Rnf38 protein_coding protein_coding MGP_WSBEiJ_T0064334.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41833899 41859467 - MGP_WSBEiJ_P0064334 Rnf38 protein_coding protein_coding MGP_WSBEiJ_T0064335.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41840517 41858997 - Rnf38 protein_coding processed_transcript MGP_WSBEiJ_T0064336.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41840524 41923235 - Rnf38 protein_coding processed_transcript MGP_WSBEiJ_T0064337.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41840553 41859384 - Rnf38 protein_coding processed_transcript MGP_WSBEiJ_T0064338.1 MGP_WSBEiJ_G0027449.1 mouse_genomes_project 4 41850423 41858954 - Rnf38 protein_coding processed_transcript MGP_WSBEiJ_T0099507.1 MGP_WSBEiJ_G0038170.1 mouse_genomes_project 4 34686142 34686267 + Gm22732 snoRNA snoRNA MGP_WSBEiJ_T0064279.1 MGP_WSBEiJ_G0027437.1 mouse_genomes_project 4 41318784 41321006 - Hint2 protein_coding processed_transcript MGP_WSBEiJ_T0064280.1 MGP_WSBEiJ_G0027437.1 mouse_genomes_project 4 41318784 41321001 - Hint2 protein_coding processed_transcript MGP_WSBEiJ_T0064281.1 MGP_WSBEiJ_G0027437.1 mouse_genomes_project 4 41318785 41319514 - Hint2 protein_coding processed_transcript MGP_WSBEiJ_T0064282.1 MGP_WSBEiJ_G0027437.1 mouse_genomes_project 4 41318786 41319285 - Hint2 protein_coding processed_transcript MGP_WSBEiJ_T0064283.1 MGP_WSBEiJ_G0027437.1 mouse_genomes_project 4 41318786 41321024 - MGP_WSBEiJ_P0064283 Hint2 protein_coding protein_coding MGP_WSBEiJ_T0064284.1 MGP_WSBEiJ_G0027437.1 mouse_genomes_project 4 41318787 41321006 - Hint2 protein_coding processed_transcript MGP_WSBEiJ_T0064285.1 MGP_WSBEiJ_G0027437.1 mouse_genomes_project 4 41319231 41320301 - Hint2 protein_coding processed_transcript MGP_WSBEiJ_T0068411.1 MGP_WSBEiJ_G0028381.1 mouse_genomes_project 4 156428420 156437423 - MGP_WSBEiJ_P0068411 Dffb protein_coding unknown_likely_coding MGP_WSBEiJ_T0068412.1 MGP_WSBEiJ_G0028381.1 mouse_genomes_project 4 156428428 156440592 - MGP_WSBEiJ_P0068412 Dffb protein_coding protein_coding MGP_WSBEiJ_T0068413.1 MGP_WSBEiJ_G0028381.1 mouse_genomes_project 4 156432970 156440517 - Dffb protein_coding processed_transcript MGP_WSBEiJ_T0068414.1 MGP_WSBEiJ_G0028381.1 mouse_genomes_project 4 156437975 156440523 - Dffb protein_coding retained_intron MGP_WSBEiJ_T0068415.1 MGP_WSBEiJ_G0028381.1 mouse_genomes_project 4 156438123 156440455 - MGP_WSBEiJ_P0068415 Dffb protein_coding unknown_likely_coding MGP_WSBEiJ_T0068416.1 MGP_WSBEiJ_G0028381.1 mouse_genomes_project 4 156439968 156440547 - Dffb protein_coding retained_intron MGP_WSBEiJ_T0067550.1 MGP_WSBEiJ_G0028180.1 mouse_genomes_project 4 138022367 138028299 - MGP_WSBEiJ_P0067550 C1qb protein_coding protein_coding MGP_WSBEiJ_T0064786.1 MGP_WSBEiJ_G0027565.1 mouse_genomes_project 4 60878362 60893187 - MGP_WSBEiJ_P0064786 Cdc26 protein_coding protein_coding MGP_WSBEiJ_T0064787.1 MGP_WSBEiJ_G0027565.1 mouse_genomes_project 4 60878413 60893170 - MGP_WSBEiJ_P0064787 Cdc26 protein_coding protein_coding MGP_WSBEiJ_T0064788.1 MGP_WSBEiJ_G0027565.1 mouse_genomes_project 4 60885398 60890091 - Cdc26 protein_coding retained_intron MGP_WSBEiJ_T0067102.1 MGP_WSBEiJ_G0028081.1 mouse_genomes_project 4 133276929 133296286 - MGP_WSBEiJ_P0067102 Sesn2 protein_coding protein_coding MGP_WSBEiJ_T0064918.1 MGP_WSBEiJ_G0027599.1 mouse_genomes_project 4 72434241 72519410 - MGP_WSBEiJ_P0064918 Rasef protein_coding protein_coding MGP_WSBEiJ_T0064919.1 MGP_WSBEiJ_G0027599.1 mouse_genomes_project 4 72434241 72519517 - MGP_WSBEiJ_P0064919 Rasef protein_coding protein_coding MGP_WSBEiJ_T0099554.1 MGP_WSBEiJ_G0038217.1 mouse_genomes_project 4 117067337 117067408 - Snord38a snoRNA snoRNA MGP_WSBEiJ_T0066560.1 MGP_WSBEiJ_G0027969.1 mouse_genomes_project 4 125356802 125379455 + MGP_WSBEiJ_P0066560 Rspo1 protein_coding protein_coding MGP_WSBEiJ_T0066561.1 MGP_WSBEiJ_G0027969.1 mouse_genomes_project 4 125377835 125378881 + Rspo1 protein_coding processed_transcript MGP_WSBEiJ_T0010410.1 MGP_WSBEiJ_G0008567.1 mouse_genomes_project 4 34015997 34016074 - Mir873a miRNA miRNA MGP_WSBEiJ_T0004475.1 MGP_WSBEiJ_G0003886.1 mouse_genomes_project 4 136343968 136346172 + Gm12984 antisense antisense MGP_WSBEiJ_T0001371.1 MGP_WSBEiJ_G0001300.1 mouse_genomes_project 4 9343390 9426203 + TEC TEC MGP_WSBEiJ_T0014250.1 MGP_WSBEiJ_G0012380.1 mouse_genomes_project 4 97537942 97538398 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004476.1 MGP_WSBEiJ_G0003887.1 mouse_genomes_project 4 137080839 137088633 + Gm13008 antisense antisense MGP_WSBEiJ_T0014190.1 MGP_WSBEiJ_G0012320.1 mouse_genomes_project 4 73849099 73849300 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004395.1 MGP_WSBEiJ_G0003829.1 mouse_genomes_project 4 94322684 94375483 + Gm12694 antisense antisense MGP_WSBEiJ_T0064465.1 MGP_WSBEiJ_G0027474.1 mouse_genomes_project 4 44248000 44268670 - MGP_WSBEiJ_P0064465 Hemgn protein_coding protein_coding MGP_WSBEiJ_T0064466.1 MGP_WSBEiJ_G0027474.1 mouse_genomes_project 4 44248000 44258222 - MGP_WSBEiJ_P0064466 Hemgn protein_coding protein_coding MGP_WSBEiJ_T0004511.1 MGP_WSBEiJ_G0003914.1 mouse_genomes_project 4 151056667 151064324 + Gm17029 antisense antisense MGP_WSBEiJ_T0004512.1 MGP_WSBEiJ_G0003914.1 mouse_genomes_project 4 151056696 151082556 + Gm17029 antisense antisense MGP_WSBEiJ_T0004513.1 MGP_WSBEiJ_G0003914.1 mouse_genomes_project 4 151056730 151063360 + Gm17029 antisense antisense MGP_WSBEiJ_T0097049.1 MGP_WSBEiJ_G0035730.1 mouse_genomes_project 4 38820255 38820370 + n-R5s183 rRNA rRNA MGP_WSBEiJ_T0014402.1 MGP_WSBEiJ_G0012532.1 mouse_genomes_project 4 152411364 152411773 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064021.1 MGP_WSBEiJ_G0027392.1 mouse_genomes_project 4 39024130 39031686 - MGP_WSBEiJ_P0064021 AI464131 protein_coding protein_coding MGP_WSBEiJ_T0064022.1 MGP_WSBEiJ_G0027392.1 mouse_genomes_project 4 39028071 39031278 - MGP_WSBEiJ_P0064022 AI464131 protein_coding protein_coding MGP_WSBEiJ_T0017515.1 MGP_WSBEiJ_G0015001.1 mouse_genomes_project 4 134943864 134945563 + Gm13061 processed_transcript processed_transcript MGP_WSBEiJ_T0064451.1 MGP_WSBEiJ_G0027470.1 mouse_genomes_project 4 43968566 44003602 + MGP_WSBEiJ_P0064451 Ncbp1 protein_coding protein_coding MGP_WSBEiJ_T0064452.1 MGP_WSBEiJ_G0027470.1 mouse_genomes_project 4 43968806 44003205 + MGP_WSBEiJ_P0064452 Ncbp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064454.1 MGP_WSBEiJ_G0027470.1 mouse_genomes_project 4 43988436 43990630 + Ncbp1 protein_coding processed_transcript MGP_WSBEiJ_T0064455.1 MGP_WSBEiJ_G0027470.1 mouse_genomes_project 4 43995727 44003178 + Ncbp1 protein_coding processed_transcript MGP_WSBEiJ_T0001374.1 MGP_WSBEiJ_G0001303.1 mouse_genomes_project 4 42392123 42393691 + TEC TEC MGP_WSBEiJ_T0014313.1 MGP_WSBEiJ_G0012443.1 mouse_genomes_project 4 117707724 117708039 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065379.1 MGP_WSBEiJ_G0027710.1 mouse_genomes_project 4 101529629 101532913 - MGP_WSBEiJ_P0065379 Gm12790 protein_coding protein_coding MGP_WSBEiJ_T0017431.1 MGP_WSBEiJ_G0014953.1 mouse_genomes_project 4 780326 834438 + A830012C17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0007791.1 MGP_WSBEiJ_G0006375.1 mouse_genomes_project 4 102995578 103108583 + Gm12718 lincRNA lincRNA MGP_WSBEiJ_T0007792.1 MGP_WSBEiJ_G0006375.1 mouse_genomes_project 4 102995599 103108565 + Gm12718 lincRNA lincRNA MGP_WSBEiJ_T0014406.1 MGP_WSBEiJ_G0012536.1 mouse_genomes_project 4 156517666 156517772 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007797.1 MGP_WSBEiJ_G0006379.1 mouse_genomes_project 4 106597494 106603670 - Gm12746 lincRNA lincRNA MGP_WSBEiJ_T0066422.1 MGP_WSBEiJ_G0027927.1 mouse_genomes_project 4 121119818 121168654 - MGP_WSBEiJ_P0066422 Smap2 protein_coding protein_coding MGP_WSBEiJ_T0066423.1 MGP_WSBEiJ_G0027927.1 mouse_genomes_project 4 121123382 121127203 - Smap2 protein_coding processed_transcript MGP_WSBEiJ_T0066410.1 MGP_WSBEiJ_G0027924.1 mouse_genomes_project 4 121003077 121033958 + Rims3 protein_coding processed_transcript MGP_WSBEiJ_T0066411.1 MGP_WSBEiJ_G0027924.1 mouse_genomes_project 4 121003080 121048272 + MGP_WSBEiJ_P0066411 Rims3 protein_coding protein_coding MGP_WSBEiJ_T0066412.1 MGP_WSBEiJ_G0027924.1 mouse_genomes_project 4 121011798 121048272 + MGP_WSBEiJ_P0066412 Rims3 protein_coding protein_coding MGP_WSBEiJ_T0066413.1 MGP_WSBEiJ_G0027924.1 mouse_genomes_project 4 121027348 121043253 + MGP_WSBEiJ_P0066413 Rims3 protein_coding protein_coding MGP_WSBEiJ_T0068051.1 MGP_WSBEiJ_G0028316.1 mouse_genomes_project 4 150190269 150197005 + MGP_WSBEiJ_P0068051 Fbxo2 protein_coding protein_coding MGP_WSBEiJ_T0065868.1 MGP_WSBEiJ_G0027802.1 mouse_genomes_project 4 114603476 114604343 - MGP_WSBEiJ_P0065868 Foxe3 protein_coding protein_coding MGP_WSBEiJ_T0066582.1 MGP_WSBEiJ_G0027976.1 mouse_genomes_project 4 126459675 126466848 + Csf3r protein_coding processed_transcript MGP_WSBEiJ_T0066583.1 MGP_WSBEiJ_G0027976.1 mouse_genomes_project 4 126462287 126482232 + MGP_WSBEiJ_P0066583 Csf3r protein_coding unknown_likely_coding MGP_WSBEiJ_T0007891.1 MGP_WSBEiJ_G0006448.1 mouse_genomes_project 4 143946497 143987605 - Gm13052 lincRNA lincRNA MGP_WSBEiJ_T0068529.1 MGP_WSBEiJ_G0028403.1 mouse_genomes_project 4 157613404 157682608 + MGP_WSBEiJ_P0068529 Morn1 protein_coding protein_coding MGP_WSBEiJ_T0068530.1 MGP_WSBEiJ_G0028403.1 mouse_genomes_project 4 157613404 157644805 + MGP_WSBEiJ_P0068530 Morn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068531.1 MGP_WSBEiJ_G0028403.1 mouse_genomes_project 4 157613416 157623161 + MGP_WSBEiJ_P0068531 Morn1 protein_coding protein_coding MGP_WSBEiJ_T0068532.1 MGP_WSBEiJ_G0028403.1 mouse_genomes_project 4 157613430 157623442 + MGP_WSBEiJ_P0068532 Morn1 protein_coding protein_coding MGP_WSBEiJ_T0068533.1 MGP_WSBEiJ_G0028403.1 mouse_genomes_project 4 157613441 157677928 + Morn1 protein_coding processed_transcript MGP_WSBEiJ_T0068534.1 MGP_WSBEiJ_G0028403.1 mouse_genomes_project 4 157613455 157677906 + Morn1 protein_coding processed_transcript MGP_WSBEiJ_T0068535.1 MGP_WSBEiJ_G0028403.1 mouse_genomes_project 4 157632258 157665028 + Morn1 protein_coding retained_intron MGP_WSBEiJ_T0068536.1 MGP_WSBEiJ_G0028403.1 mouse_genomes_project 4 157643313 157664592 + Morn1 protein_coding retained_intron MGP_WSBEiJ_T0067586.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138897711 138957315 + Rap1gap protein_coding processed_transcript MGP_WSBEiJ_T0067587.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138897739 138952631 + Rap1gap protein_coding retained_intron MGP_WSBEiJ_T0067588.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138915298 138956535 + MGP_WSBEiJ_P0067588 Rap1gap protein_coding protein_coding MGP_WSBEiJ_T0067589.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138915298 138971921 + MGP_WSBEiJ_P0067589 Rap1gap protein_coding protein_coding MGP_WSBEiJ_T0067590.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138915298 138959969 + MGP_WSBEiJ_P0067590 Rap1gap protein_coding protein_coding MGP_WSBEiJ_T0067591.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138918209 138971920 + MGP_WSBEiJ_P0067591 Rap1gap protein_coding protein_coding MGP_WSBEiJ_T0067592.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138923958 138956566 + Rap1gap protein_coding processed_transcript MGP_WSBEiJ_T0067593.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138948411 138971921 + MGP_WSBEiJ_P0067593 Rap1gap protein_coding protein_coding MGP_WSBEiJ_T0067594.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138960884 138970418 + MGP_WSBEiJ_P0067594 Rap1gap protein_coding protein_coding MGP_WSBEiJ_T0067595.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138966006 138971921 + Rap1gap protein_coding retained_intron MGP_WSBEiJ_T0067596.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138967344 138969071 + Rap1gap protein_coding retained_intron MGP_WSBEiJ_T0067597.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138969775 138970996 + Rap1gap protein_coding retained_intron MGP_WSBEiJ_T0067598.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138970240 138970879 + Rap1gap protein_coding retained_intron MGP_WSBEiJ_T0067599.1 MGP_WSBEiJ_G0028193.1 mouse_genomes_project 4 138970270 138971762 + Rap1gap protein_coding retained_intron MGP_WSBEiJ_T0097176.1 MGP_WSBEiJ_G0035857.1 mouse_genomes_project 4 49903217 49903650 + Gm24943 ribozyme ribozyme MGP_WSBEiJ_T0004471.1 MGP_WSBEiJ_G0003883.1 mouse_genomes_project 4 134781005 134785719 + Gm12977 antisense antisense MGP_WSBEiJ_T0004472.1 MGP_WSBEiJ_G0003883.1 mouse_genomes_project 4 134781646 134784945 + Gm12977 antisense antisense MGP_WSBEiJ_T0064698.1 MGP_WSBEiJ_G0027541.1 mouse_genomes_project 4 56616946 56710551 + MGP_WSBEiJ_P0064698 Musk protein_coding protein_coding MGP_WSBEiJ_T0064699.1 MGP_WSBEiJ_G0027541.1 mouse_genomes_project 4 56616948 56710551 + MGP_WSBEiJ_P0064699 Musk protein_coding protein_coding MGP_WSBEiJ_T0064700.1 MGP_WSBEiJ_G0027541.1 mouse_genomes_project 4 56616948 56710552 + MGP_WSBEiJ_P0064700 Musk protein_coding protein_coding MGP_WSBEiJ_T0064701.1 MGP_WSBEiJ_G0027541.1 mouse_genomes_project 4 56616948 56710552 + MGP_WSBEiJ_P0064701 Musk protein_coding protein_coding MGP_WSBEiJ_T0064702.1 MGP_WSBEiJ_G0027541.1 mouse_genomes_project 4 56616948 56710551 + MGP_WSBEiJ_P0064702 Musk protein_coding protein_coding MGP_WSBEiJ_T0064703.1 MGP_WSBEiJ_G0027541.1 mouse_genomes_project 4 56616948 56710551 + MGP_WSBEiJ_P0064703 Musk protein_coding protein_coding MGP_WSBEiJ_T0064704.1 MGP_WSBEiJ_G0027541.1 mouse_genomes_project 4 56616948 56710552 + MGP_WSBEiJ_P0064704 Musk protein_coding protein_coding MGP_WSBEiJ_T0064705.1 MGP_WSBEiJ_G0027541.1 mouse_genomes_project 4 56617155 56636048 + Musk protein_coding processed_transcript MGP_WSBEiJ_T0064013.1 MGP_WSBEiJ_G0027390.1 mouse_genomes_project 4 38916763 38993655 - MGP_WSBEiJ_P0064013 Kif24 protein_coding protein_coding MGP_WSBEiJ_T0064014.1 MGP_WSBEiJ_G0027390.1 mouse_genomes_project 4 38917629 38993663 - MGP_WSBEiJ_P0064014 Kif24 protein_coding protein_coding MGP_WSBEiJ_T0064015.1 MGP_WSBEiJ_G0027390.1 mouse_genomes_project 4 38921211 38938498 - Kif24 protein_coding processed_transcript MGP_WSBEiJ_T0064016.1 MGP_WSBEiJ_G0027390.1 mouse_genomes_project 4 38931838 38933324 - Kif24 protein_coding processed_transcript MGP_WSBEiJ_T0064017.1 MGP_WSBEiJ_G0027390.1 mouse_genomes_project 4 38942270 38993655 - Kif24 protein_coding processed_transcript MGP_WSBEiJ_T0064018.1 MGP_WSBEiJ_G0027390.1 mouse_genomes_project 4 38962573 38993661 - MGP_WSBEiJ_P0064018 Kif24 protein_coding protein_coding MGP_WSBEiJ_T0064019.1 MGP_WSBEiJ_G0027390.1 mouse_genomes_project 4 38981060 38993661 - Kif24 protein_coding processed_transcript MGP_WSBEiJ_T0014271.1 MGP_WSBEiJ_G0012401.1 mouse_genomes_project 4 103584135 103584376 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014136.1 MGP_WSBEiJ_G0012266.1 mouse_genomes_project 4 50537638 50537896 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014127.1 MGP_WSBEiJ_G0012257.1 mouse_genomes_project 4 47341986 47440599 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007883.1 MGP_WSBEiJ_G0006440.1 mouse_genomes_project 4 141883122 141888770 + Gm13017 lincRNA lincRNA MGP_WSBEiJ_T0014341.1 MGP_WSBEiJ_G0012471.1 mouse_genomes_project 4 125054803 125055441 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065681.1 MGP_WSBEiJ_G0027767.1 mouse_genomes_project 4 108245242 108251789 - MGP_WSBEiJ_P0065681 Gpx7 protein_coding protein_coding MGP_WSBEiJ_T0065682.1 MGP_WSBEiJ_G0027767.1 mouse_genomes_project 4 108245701 108251552 - MGP_WSBEiJ_P0065682 Gpx7 protein_coding protein_coding MGP_WSBEiJ_T0063678.1 MGP_WSBEiJ_G0027306.1 mouse_genomes_project 4 12789938 12806660 - MGP_WSBEiJ_P0063678 Osgin2 protein_coding protein_coding MGP_WSBEiJ_T0063679.1 MGP_WSBEiJ_G0027306.1 mouse_genomes_project 4 12790044 12794893 - Osgin2 protein_coding processed_transcript MGP_WSBEiJ_T0063680.1 MGP_WSBEiJ_G0027306.1 mouse_genomes_project 4 12794735 12806568 - MGP_WSBEiJ_P0063680 Osgin2 protein_coding protein_coding MGP_WSBEiJ_T0063681.1 MGP_WSBEiJ_G0027306.1 mouse_genomes_project 4 12795315 12806593 - Osgin2 protein_coding processed_transcript MGP_WSBEiJ_T0063682.1 MGP_WSBEiJ_G0027306.1 mouse_genomes_project 4 12797662 12799177 - Osgin2 protein_coding processed_transcript MGP_WSBEiJ_T0004408.1 MGP_WSBEiJ_G0003833.1 mouse_genomes_project 4 98588136 98591204 + Gm12705 antisense antisense MGP_WSBEiJ_T0014196.1 MGP_WSBEiJ_G0012326.1 mouse_genomes_project 4 74672949 74673845 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066323.1 MGP_WSBEiJ_G0027905.1 mouse_genomes_project 4 119345355 119366994 - MGP_WSBEiJ_P0066323 Ppih protein_coding protein_coding MGP_WSBEiJ_T0066324.1 MGP_WSBEiJ_G0027905.1 mouse_genomes_project 4 119345355 119366981 - MGP_WSBEiJ_P0066324 Ppih protein_coding protein_coding MGP_WSBEiJ_T0066325.1 MGP_WSBEiJ_G0027905.1 mouse_genomes_project 4 119345355 119367043 - MGP_WSBEiJ_P0066325 Ppih protein_coding protein_coding MGP_WSBEiJ_T0066326.1 MGP_WSBEiJ_G0027905.1 mouse_genomes_project 4 119352477 119366914 - MGP_WSBEiJ_P0066326 Ppih protein_coding protein_coding MGP_WSBEiJ_T0066327.1 MGP_WSBEiJ_G0027905.1 mouse_genomes_project 4 119353052 119366981 - MGP_WSBEiJ_P0066327 Ppih protein_coding protein_coding MGP_WSBEiJ_T0066328.1 MGP_WSBEiJ_G0027905.1 mouse_genomes_project 4 119357808 119366996 - MGP_WSBEiJ_P0066328 Ppih protein_coding protein_coding MGP_WSBEiJ_T0014025.1 MGP_WSBEiJ_G0012155.1 mouse_genomes_project 4 12760574 12760932 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014305.1 MGP_WSBEiJ_G0012435.1 mouse_genomes_project 4 116310162 116310579 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066424.1 MGP_WSBEiJ_G0027928.1 mouse_genomes_project 4 121194665 121210598 + MGP_WSBEiJ_P0066424 Col9a2 protein_coding protein_coding MGP_WSBEiJ_T0066425.1 MGP_WSBEiJ_G0027928.1 mouse_genomes_project 4 121195028 121199612 + Col9a2 protein_coding retained_intron MGP_WSBEiJ_T0066426.1 MGP_WSBEiJ_G0027928.1 mouse_genomes_project 4 121208274 121210095 + Col9a2 protein_coding processed_transcript MGP_WSBEiJ_T0100092.1 MGP_WSBEiJ_G0038699.1 mouse_genomes_project 4 86001031 86015714 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100818.1 MGP_WSBEiJ_G0039276.1 mouse_genomes_project 4 87952048 87952593 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007719.1 MGP_WSBEiJ_G0006315.1 mouse_genomes_project 4 44907026 44909492 - Gm568 lincRNA lincRNA MGP_WSBEiJ_T0066256.1 MGP_WSBEiJ_G0027882.1 mouse_genomes_project 4 118548174 118621635 - MGP_WSBEiJ_P0066256 Cfap57 protein_coding unknown_likely_coding MGP_WSBEiJ_T0063596.1 MGP_WSBEiJ_G0027283.1 mouse_genomes_project 4 7939757 7985462 - MGP_WSBEiJ_P0063596 Dpy19l4 protein_coding protein_coding MGP_WSBEiJ_T0063597.1 MGP_WSBEiJ_G0027283.1 mouse_genomes_project 4 7939757 8003516 - MGP_WSBEiJ_P0063597 Dpy19l4 protein_coding protein_coding MGP_WSBEiJ_T0063598.1 MGP_WSBEiJ_G0027283.1 mouse_genomes_project 4 7957574 8003516 - MGP_WSBEiJ_P0063598 Dpy19l4 protein_coding protein_coding MGP_WSBEiJ_T0063599.1 MGP_WSBEiJ_G0027283.1 mouse_genomes_project 4 7960677 8003454 - MGP_WSBEiJ_P0063599 Dpy19l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063600.1 MGP_WSBEiJ_G0027283.1 mouse_genomes_project 4 7984506 8003426 - Dpy19l4 protein_coding processed_transcript MGP_WSBEiJ_T0063601.1 MGP_WSBEiJ_G0027283.1 mouse_genomes_project 4 7998689 8003479 - Dpy19l4 protein_coding processed_transcript MGP_WSBEiJ_T0014337.1 MGP_WSBEiJ_G0012467.1 mouse_genomes_project 4 123915821 123916230 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099508.1 MGP_WSBEiJ_G0038171.1 mouse_genomes_project 4 36760103 36760229 + Gm23607 snoRNA snoRNA MGP_WSBEiJ_T0017493.1 MGP_WSBEiJ_G0014993.1 mouse_genomes_project 4 119261922 119266131 + processed_transcript processed_transcript MGP_WSBEiJ_T0063731.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18679950 18709560 + MGP_WSBEiJ_P0063731 Pnisr protein_coding protein_coding MGP_WSBEiJ_T0063732.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18680415 18706840 + MGP_WSBEiJ_P0063732 Pnisr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063733.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18680422 18709552 + MGP_WSBEiJ_P0063733 Pnisr protein_coding protein_coding MGP_WSBEiJ_T0063734.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18680425 18692836 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0063735.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18680425 18704435 + MGP_WSBEiJ_P0063735 Pnisr protein_coding protein_coding MGP_WSBEiJ_T0063736.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18680431 18690358 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0063737.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18680440 18687291 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0063738.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18680448 18694491 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0063739.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18686434 18691570 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0063740.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18691093 18694411 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0063741.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18691366 18693254 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0063742.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18704126 18706949 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0063743.1 MGP_WSBEiJ_G0027324.1 mouse_genomes_project 4 18707288 18708341 + Pnisr protein_coding processed_transcript MGP_WSBEiJ_T0064831.1 MGP_WSBEiJ_G0027575.1 mouse_genomes_project 4 61470108 61644965 + MGP_WSBEiJ_P0064831 Zfp618 protein_coding protein_coding MGP_WSBEiJ_T0064832.1 MGP_WSBEiJ_G0027575.1 mouse_genomes_project 4 61470108 61621021 + MGP_WSBEiJ_P0064832 Zfp618 protein_coding protein_coding MGP_WSBEiJ_T0064833.1 MGP_WSBEiJ_G0027575.1 mouse_genomes_project 4 61470109 61639290 + MGP_WSBEiJ_P0064833 Zfp618 protein_coding protein_coding MGP_WSBEiJ_T0064834.1 MGP_WSBEiJ_G0027575.1 mouse_genomes_project 4 61625674 61626703 + Zfp618 protein_coding processed_transcript MGP_WSBEiJ_T0064094.1 MGP_WSBEiJ_G0027412.1 mouse_genomes_project 4 40589819 40590650 + Dnajb5 protein_coding processed_transcript MGP_WSBEiJ_T0064095.1 MGP_WSBEiJ_G0027412.1 mouse_genomes_project 4 40590256 40600244 + Dnajb5 protein_coding retained_intron MGP_WSBEiJ_T0064096.1 MGP_WSBEiJ_G0027412.1 mouse_genomes_project 4 40590345 40593208 + Dnajb5 protein_coding processed_transcript MGP_WSBEiJ_T0064097.1 MGP_WSBEiJ_G0027412.1 mouse_genomes_project 4 40590667 40600250 + MGP_WSBEiJ_P0064097 Dnajb5 protein_coding protein_coding MGP_WSBEiJ_T0064098.1 MGP_WSBEiJ_G0027412.1 mouse_genomes_project 4 40592999 40600235 + MGP_WSBEiJ_P0064098 Dnajb5 protein_coding protein_coding MGP_WSBEiJ_T0066418.1 MGP_WSBEiJ_G0027926.1 mouse_genomes_project 4 121083887 121099945 - MGP_WSBEiJ_P0066418 Zfp69 protein_coding protein_coding MGP_WSBEiJ_T0066419.1 MGP_WSBEiJ_G0027926.1 mouse_genomes_project 4 121084103 121097676 - MGP_WSBEiJ_P0066419 Zfp69 protein_coding protein_coding MGP_WSBEiJ_T0066420.1 MGP_WSBEiJ_G0027926.1 mouse_genomes_project 4 121085056 121096138 - MGP_WSBEiJ_P0066420 Zfp69 protein_coding protein_coding MGP_WSBEiJ_T0066421.1 MGP_WSBEiJ_G0027926.1 mouse_genomes_project 4 121085057 121088456 - Zfp69 protein_coding retained_intron MGP_WSBEiJ_T0065866.1 MGP_WSBEiJ_G0027800.1 mouse_genomes_project 4 114493561 114531252 + MGP_WSBEiJ_P0065866 Gm12830 protein_coding protein_coding MGP_WSBEiJ_T0065862.1 MGP_WSBEiJ_G0027798.1 mouse_genomes_project 4 112189437 112255290 - MGP_WSBEiJ_P0065862 Skint10 protein_coding protein_coding MGP_WSBEiJ_T0065863.1 MGP_WSBEiJ_G0027798.1 mouse_genomes_project 4 112250427 112255331 - MGP_WSBEiJ_P0065863 Skint10 protein_coding protein_coding MGP_WSBEiJ_T0065864.1 MGP_WSBEiJ_G0027798.1 mouse_genomes_project 4 112251851 112255292 - Skint10 protein_coding processed_transcript MGP_WSBEiJ_T0068681.1 MGP_WSBEiJ_G0028431.1 mouse_genomes_project 4 158487785 158489630 - Pusl1 protein_coding processed_transcript MGP_WSBEiJ_T0068683.1 MGP_WSBEiJ_G0028431.1 mouse_genomes_project 4 158488768 158491892 - MGP_WSBEiJ_P0068683 Pusl1 protein_coding protein_coding MGP_WSBEiJ_T0068684.1 MGP_WSBEiJ_G0028431.1 mouse_genomes_project 4 158490496 158491320 - Pusl1 protein_coding retained_intron MGP_WSBEiJ_T0068685.1 MGP_WSBEiJ_G0028431.1 mouse_genomes_project 4 158490607 158491837 - Pusl1 protein_coding retained_intron MGP_WSBEiJ_T0068686.1 MGP_WSBEiJ_G0028431.1 mouse_genomes_project 4 158490891 158491866 - Pusl1 protein_coding retained_intron MGP_WSBEiJ_T0068687.1 MGP_WSBEiJ_G0028431.1 mouse_genomes_project 4 158490952 158491880 - Pusl1 protein_coding processed_transcript MGP_WSBEiJ_T0068688.1 MGP_WSBEiJ_G0028431.1 mouse_genomes_project 4 158491162 158491839 - Pusl1 protein_coding retained_intron MGP_WSBEiJ_T0098291.1 MGP_WSBEiJ_G0036954.1 mouse_genomes_project 4 121242310 121242474 - Gm23540 snRNA snRNA MGP_WSBEiJ_T0066226.1 MGP_WSBEiJ_G0027875.1 mouse_genomes_project 4 118396842 118403240 + MGP_WSBEiJ_P0066226 Med8 protein_coding protein_coding MGP_WSBEiJ_T0066227.1 MGP_WSBEiJ_G0027875.1 mouse_genomes_project 4 118396860 118402571 + MGP_WSBEiJ_P0066227 Med8 protein_coding protein_coding MGP_WSBEiJ_T0066228.1 MGP_WSBEiJ_G0027875.1 mouse_genomes_project 4 118396861 118401328 + Med8 protein_coding processed_transcript MGP_WSBEiJ_T0066229.1 MGP_WSBEiJ_G0027875.1 mouse_genomes_project 4 118396886 118402574 + MGP_WSBEiJ_P0066229 Med8 protein_coding protein_coding MGP_WSBEiJ_T0066230.1 MGP_WSBEiJ_G0027875.1 mouse_genomes_project 4 118397853 118399302 + Med8 protein_coding processed_transcript MGP_WSBEiJ_T0066231.1 MGP_WSBEiJ_G0027875.1 mouse_genomes_project 4 118398942 118400023 + Med8 protein_coding processed_transcript MGP_WSBEiJ_T0066232.1 MGP_WSBEiJ_G0027875.1 mouse_genomes_project 4 118399133 118401538 + Med8 protein_coding processed_transcript MGP_WSBEiJ_T0064046.1 MGP_WSBEiJ_G0027398.1 mouse_genomes_project 4 39254117 39255619 - MGP_WSBEiJ_P0064046 Rpp25l protein_coding protein_coding MGP_WSBEiJ_T0068675.1 MGP_WSBEiJ_G0028430.1 mouse_genomes_project 4 158466725 158488606 + Cpsf3l protein_coding processed_transcript MGP_WSBEiJ_T0068676.1 MGP_WSBEiJ_G0028430.1 mouse_genomes_project 4 158466725 158489220 + MGP_WSBEiJ_P0068676 Cpsf3l protein_coding protein_coding MGP_WSBEiJ_T0068677.1 MGP_WSBEiJ_G0028430.1 mouse_genomes_project 4 158466725 158488592 + MGP_WSBEiJ_P0068677 Cpsf3l protein_coding protein_coding MGP_WSBEiJ_T0068678.1 MGP_WSBEiJ_G0028430.1 mouse_genomes_project 4 158466746 158469503 + Cpsf3l protein_coding retained_intron MGP_WSBEiJ_T0068679.1 MGP_WSBEiJ_G0028430.1 mouse_genomes_project 4 158466794 158486832 + MGP_WSBEiJ_P0068679 Cpsf3l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068680.1 MGP_WSBEiJ_G0028430.1 mouse_genomes_project 4 158487691 158488394 + Cpsf3l protein_coding retained_intron MGP_WSBEiJ_T0068682.1 MGP_WSBEiJ_G0028430.1 mouse_genomes_project 4 158488029 158488640 + Cpsf3l protein_coding retained_intron MGP_WSBEiJ_T0064007.1 MGP_WSBEiJ_G0027388.1 mouse_genomes_project 4 38806622 38832004 - MGP_WSBEiJ_P0064007 Dcaf12 protein_coding protein_coding MGP_WSBEiJ_T0064587.1 MGP_WSBEiJ_G0027508.1 mouse_genomes_project 4 50698609 50716004 + MGP_WSBEiJ_P0064587 Toporsl protein_coding protein_coding MGP_WSBEiJ_T0064588.1 MGP_WSBEiJ_G0027508.1 mouse_genomes_project 4 50710785 50716001 + MGP_WSBEiJ_P0064588 Toporsl protein_coding protein_coding MGP_WSBEiJ_T0066294.1 MGP_WSBEiJ_G0027899.1 mouse_genomes_project 4 119233134 119239118 + MGP_WSBEiJ_P0066294 Svbp protein_coding protein_coding MGP_WSBEiJ_T0066295.1 MGP_WSBEiJ_G0027899.1 mouse_genomes_project 4 119233235 119239118 + MGP_WSBEiJ_P0066295 Svbp protein_coding protein_coding MGP_WSBEiJ_T0066296.1 MGP_WSBEiJ_G0027899.1 mouse_genomes_project 4 119233324 119239118 + MGP_WSBEiJ_P0066296 Svbp protein_coding protein_coding MGP_WSBEiJ_T0064429.1 MGP_WSBEiJ_G0027466.1 mouse_genomes_project 4 43703269 43722581 + Ccdc180 protein_coding processed_transcript MGP_WSBEiJ_T0064430.1 MGP_WSBEiJ_G0027466.1 mouse_genomes_project 4 43703269 43767572 + MGP_WSBEiJ_P0064430 Ccdc180 protein_coding protein_coding MGP_WSBEiJ_T0064431.1 MGP_WSBEiJ_G0027466.1 mouse_genomes_project 4 43703819 43767565 + MGP_WSBEiJ_P0064431 Ccdc180 protein_coding protein_coding MGP_WSBEiJ_T0064432.1 MGP_WSBEiJ_G0027466.1 mouse_genomes_project 4 43727442 43737147 + MGP_WSBEiJ_P0064432 Ccdc180 protein_coding protein_coding MGP_WSBEiJ_T0068715.1 MGP_WSBEiJ_G0028436.1 mouse_genomes_project 4 158588135 158609902 + MGP_WSBEiJ_P0068715 Sdf4 protein_coding protein_coding MGP_WSBEiJ_T0068716.1 MGP_WSBEiJ_G0028436.1 mouse_genomes_project 4 158588174 158613307 + MGP_WSBEiJ_P0068716 Sdf4 protein_coding protein_coding MGP_WSBEiJ_T0068717.1 MGP_WSBEiJ_G0028436.1 mouse_genomes_project 4 158588433 158600475 + MGP_WSBEiJ_P0068717 Sdf4 protein_coding protein_coding MGP_WSBEiJ_T0068718.1 MGP_WSBEiJ_G0028436.1 mouse_genomes_project 4 158588640 158610010 + MGP_WSBEiJ_P0068718 Sdf4 protein_coding protein_coding MGP_WSBEiJ_T0068719.1 MGP_WSBEiJ_G0028436.1 mouse_genomes_project 4 158596406 158597944 + Sdf4 protein_coding retained_intron MGP_WSBEiJ_T0068720.1 MGP_WSBEiJ_G0028436.1 mouse_genomes_project 4 158608201 158609549 + Sdf4 protein_coding retained_intron MGP_WSBEiJ_T0007871.1 MGP_WSBEiJ_G0006429.1 mouse_genomes_project 4 137452265 137453849 - Gm27022 lincRNA lincRNA MGP_WSBEiJ_T0067881.1 MGP_WSBEiJ_G0028259.1 mouse_genomes_project 4 143203334 143208615 - MGP_WSBEiJ_P0067881 Tmem82 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067882.1 MGP_WSBEiJ_G0028259.1 mouse_genomes_project 4 143204194 143208149 - MGP_WSBEiJ_P0067882 Tmem82 protein_coding protein_coding MGP_WSBEiJ_T0067883.1 MGP_WSBEiJ_G0028259.1 mouse_genomes_project 4 143204198 143207892 - Tmem82 protein_coding retained_intron MGP_WSBEiJ_T0067982.1 MGP_WSBEiJ_G0028299.1 mouse_genomes_project 4 147086419 147137797 - MGP_WSBEiJ_P0067982 Tnfrsf8 protein_coding protein_coding MGP_WSBEiJ_T0067983.1 MGP_WSBEiJ_G0028299.1 mouse_genomes_project 4 147086421 147137814 - MGP_WSBEiJ_P0067983 Tnfrsf8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014073.1 MGP_WSBEiJ_G0012203.1 mouse_genomes_project 4 26589104 26589612 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098259.1 MGP_WSBEiJ_G0036922.1 mouse_genomes_project 4 62189774 62189881 - Gm24234 snRNA snRNA MGP_WSBEiJ_T0098240.1 MGP_WSBEiJ_G0036903.1 mouse_genomes_project 4 29142687 29142805 - Gm26254 snRNA snRNA MGP_WSBEiJ_T0066438.1 MGP_WSBEiJ_G0027936.1 mouse_genomes_project 4 123048363 123083816 + MGP_WSBEiJ_P0066438 Ppt1 protein_coding protein_coding MGP_WSBEiJ_T0066439.1 MGP_WSBEiJ_G0027936.1 mouse_genomes_project 4 123048367 123072758 + MGP_WSBEiJ_P0066439 Ppt1 protein_coding protein_coding MGP_WSBEiJ_T0066440.1 MGP_WSBEiJ_G0027936.1 mouse_genomes_project 4 123048371 123083913 + MGP_WSBEiJ_P0066440 Ppt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066441.1 MGP_WSBEiJ_G0027936.1 mouse_genomes_project 4 123048375 123074999 + MGP_WSBEiJ_P0066441 Ppt1 protein_coding protein_coding MGP_WSBEiJ_T0064511.1 MGP_WSBEiJ_G0027486.1 mouse_genomes_project 4 45391099 45400358 + MGP_WSBEiJ_P0064511 protein_coding protein_coding MGP_WSBEiJ_T0064512.1 MGP_WSBEiJ_G0027486.1 mouse_genomes_project 4 45391205 45400244 + MGP_WSBEiJ_P0064512 protein_coding protein_coding MGP_WSBEiJ_T0064513.1 MGP_WSBEiJ_G0027486.1 mouse_genomes_project 4 45391249 45400210 + MGP_WSBEiJ_P0064513 protein_coding protein_coding MGP_WSBEiJ_T0064514.1 MGP_WSBEiJ_G0027486.1 mouse_genomes_project 4 45391389 45397907 + protein_coding retained_intron MGP_WSBEiJ_T0065071.1 MGP_WSBEiJ_G0027623.1 mouse_genomes_project 4 85563226 85650941 - Saxo1 protein_coding processed_transcript MGP_WSBEiJ_T0065072.1 MGP_WSBEiJ_G0027623.1 mouse_genomes_project 4 85563226 85670840 - MGP_WSBEiJ_P0065072 Saxo1 protein_coding protein_coding MGP_WSBEiJ_T0065073.1 MGP_WSBEiJ_G0027623.1 mouse_genomes_project 4 85589038 85670532 - Saxo1 protein_coding processed_transcript MGP_WSBEiJ_T0065074.1 MGP_WSBEiJ_G0027623.1 mouse_genomes_project 4 85591626 85670865 - Saxo1 protein_coding processed_transcript MGP_WSBEiJ_T0007684.1 MGP_WSBEiJ_G0006282.1 mouse_genomes_project 4 8692349 8700051 + Gm26895 lincRNA lincRNA MGP_WSBEiJ_T0004437.1 MGP_WSBEiJ_G0003855.1 mouse_genomes_project 4 117393038 117403740 + Gm12828 antisense antisense MGP_WSBEiJ_T0064923.1 MGP_WSBEiJ_G0027601.1 mouse_genomes_project 4 72740084 72935811 + MGP_WSBEiJ_P0064923 Frmd3 protein_coding protein_coding MGP_WSBEiJ_T0064924.1 MGP_WSBEiJ_G0027601.1 mouse_genomes_project 4 72740086 72922983 + MGP_WSBEiJ_P0064924 Frmd3 protein_coding protein_coding MGP_WSBEiJ_T0064925.1 MGP_WSBEiJ_G0027601.1 mouse_genomes_project 4 72901961 72922054 + Frmd3 protein_coding processed_transcript MGP_WSBEiJ_T0014164.1 MGP_WSBEiJ_G0012294.1 mouse_genomes_project 4 61439919 61440583 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017518.1 MGP_WSBEiJ_G0015004.1 mouse_genomes_project 4 154782889 154786436 - Gm16334 processed_transcript processed_transcript MGP_WSBEiJ_T0004348.1 MGP_WSBEiJ_G0003790.1 mouse_genomes_project 4 11693432 11717855 + Gm11837 antisense antisense MGP_WSBEiJ_T0004349.1 MGP_WSBEiJ_G0003790.1 mouse_genomes_project 4 11694210 11717992 + Gm11837 antisense antisense MGP_WSBEiJ_T0004350.1 MGP_WSBEiJ_G0003790.1 mouse_genomes_project 4 11694225 11717867 + Gm11837 antisense antisense MGP_WSBEiJ_T0007723.1 MGP_WSBEiJ_G0006319.1 mouse_genomes_project 4 51395024 51403901 - AI427809 lincRNA lincRNA MGP_WSBEiJ_T0007724.1 MGP_WSBEiJ_G0006319.1 mouse_genomes_project 4 51395561 51396216 - AI427809 lincRNA lincRNA MGP_WSBEiJ_T0007725.1 MGP_WSBEiJ_G0006319.1 mouse_genomes_project 4 51396123 51399161 - AI427809 lincRNA lincRNA MGP_WSBEiJ_T0007726.1 MGP_WSBEiJ_G0006319.1 mouse_genomes_project 4 51396400 51397500 - AI427809 lincRNA lincRNA MGP_WSBEiJ_T0067356.1 MGP_WSBEiJ_G0028136.1 mouse_genomes_project 4 135479714 135493360 + MGP_WSBEiJ_P0067356 Aunip protein_coding protein_coding MGP_WSBEiJ_T0066671.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127265748 127305319 + MGP_WSBEiJ_P0066671 AU040320 protein_coding protein_coding MGP_WSBEiJ_T0066672.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127265757 127305430 + MGP_WSBEiJ_P0066672 AU040320 protein_coding protein_coding MGP_WSBEiJ_T0066673.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127265759 127385943 + MGP_WSBEiJ_P0066673 AU040320 protein_coding protein_coding MGP_WSBEiJ_T0066674.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127265974 127369366 + MGP_WSBEiJ_P0066674 AU040320 protein_coding protein_coding MGP_WSBEiJ_T0066675.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127265974 127385943 + MGP_WSBEiJ_P0066675 AU040320 protein_coding protein_coding MGP_WSBEiJ_T0066676.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127265998 127305333 + MGP_WSBEiJ_P0066676 AU040320 protein_coding protein_coding MGP_WSBEiJ_T0066677.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127266018 127301763 + AU040320 protein_coding processed_transcript MGP_WSBEiJ_T0066678.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127266030 127266938 + AU040320 protein_coding processed_transcript MGP_WSBEiJ_T0066679.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127329241 127346791 + AU040320 protein_coding processed_transcript MGP_WSBEiJ_T0066680.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127349971 127354379 + AU040320 protein_coding processed_transcript MGP_WSBEiJ_T0066681.1 MGP_WSBEiJ_G0027997.1 mouse_genomes_project 4 127365545 127368581 + AU040320 protein_coding processed_transcript MGP_WSBEiJ_T0067825.1 MGP_WSBEiJ_G0028247.1 mouse_genomes_project 4 142698754 142757842 + MGP_WSBEiJ_P0067825 Fbxo42 protein_coding protein_coding MGP_WSBEiJ_T0067826.1 MGP_WSBEiJ_G0028247.1 mouse_genomes_project 4 142698763 142746567 + Fbxo42 protein_coding processed_transcript MGP_WSBEiJ_T0067542.1 MGP_WSBEiJ_G0028177.1 mouse_genomes_project 4 137732080 137736727 + MGP_WSBEiJ_P0067542 4930549C01Rik protein_coding protein_coding MGP_WSBEiJ_T0068484.1 MGP_WSBEiJ_G0028395.1 mouse_genomes_project 4 157385575 157411877 + MGP_WSBEiJ_P0068484 Mmel1 protein_coding protein_coding MGP_WSBEiJ_T0068485.1 MGP_WSBEiJ_G0028395.1 mouse_genomes_project 4 157385575 157411870 + MGP_WSBEiJ_P0068485 Mmel1 protein_coding protein_coding MGP_WSBEiJ_T0068486.1 MGP_WSBEiJ_G0028395.1 mouse_genomes_project 4 157385626 157411877 + MGP_WSBEiJ_P0068486 Mmel1 protein_coding protein_coding MGP_WSBEiJ_T0068487.1 MGP_WSBEiJ_G0028395.1 mouse_genomes_project 4 157387604 157411870 + MGP_WSBEiJ_P0068487 Mmel1 protein_coding protein_coding MGP_WSBEiJ_T0068488.1 MGP_WSBEiJ_G0028395.1 mouse_genomes_project 4 157387638 157411870 + MGP_WSBEiJ_P0068488 Mmel1 protein_coding protein_coding MGP_WSBEiJ_T0068489.1 MGP_WSBEiJ_G0028395.1 mouse_genomes_project 4 157397587 157402035 + MGP_WSBEiJ_P0068489 Mmel1 protein_coding protein_coding MGP_WSBEiJ_T0068490.1 MGP_WSBEiJ_G0028395.1 mouse_genomes_project 4 157409173 157410304 + Mmel1 protein_coding retained_intron MGP_WSBEiJ_T0068752.1 MGP_WSBEiJ_G0028442.1 mouse_genomes_project 4 158806769 158808169 - MGP_WSBEiJ_P0068752 Isg15 protein_coding protein_coding MGP_WSBEiJ_T0066435.1 MGP_WSBEiJ_G0027933.1 mouse_genomes_project 4 121584486 121592825 - MGP_WSBEiJ_P0066435 Gm12886 protein_coding protein_coding MGP_WSBEiJ_T0014072.1 MGP_WSBEiJ_G0012202.1 mouse_genomes_project 4 26282020 26282741 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063854.1 MGP_WSBEiJ_G0027351.1 mouse_genomes_project 4 30441128 30444216 - MGP_WSBEiJ_P0063854 Pnrc1 protein_coding protein_coding MGP_WSBEiJ_T0063855.1 MGP_WSBEiJ_G0027351.1 mouse_genomes_project 4 30441709 30443281 - Pnrc1 protein_coding processed_transcript MGP_WSBEiJ_T0063856.1 MGP_WSBEiJ_G0027351.1 mouse_genomes_project 4 30441717 30487837 - Pnrc1 protein_coding processed_transcript MGP_WSBEiJ_T0010470.1 MGP_WSBEiJ_G0008627.1 mouse_genomes_project 4 139444001 139444085 + Mir6399 miRNA miRNA MGP_WSBEiJ_T0064295.1 MGP_WSBEiJ_G0027441.1 mouse_genomes_project 4 41371051 41375692 - MGP_WSBEiJ_P0064295 Olfr71 protein_coding protein_coding MGP_WSBEiJ_T0064296.1 MGP_WSBEiJ_G0027441.1 mouse_genomes_project 4 41371051 41371990 - MGP_WSBEiJ_P0064296 Olfr71 protein_coding protein_coding MGP_WSBEiJ_T0067685.1 MGP_WSBEiJ_G0028213.1 mouse_genomes_project 4 140240361 140245215 + MGP_WSBEiJ_P0067685 Pla2g2e protein_coding protein_coding MGP_WSBEiJ_T0067686.1 MGP_WSBEiJ_G0028213.1 mouse_genomes_project 4 140240390 140244902 + MGP_WSBEiJ_P0067686 Pla2g2e protein_coding protein_coding MGP_WSBEiJ_T0067687.1 MGP_WSBEiJ_G0028213.1 mouse_genomes_project 4 140241782 140245215 + MGP_WSBEiJ_P0067687 Pla2g2e protein_coding protein_coding MGP_WSBEiJ_T0067154.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133835856 133889729 + Ahdc1 protein_coding processed_transcript MGP_WSBEiJ_T0067155.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133836102 133907798 + MGP_WSBEiJ_P0067155 Ahdc1 protein_coding protein_coding MGP_WSBEiJ_T0067156.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133836102 133908045 + MGP_WSBEiJ_P0067156 Ahdc1 protein_coding protein_coding MGP_WSBEiJ_T0067157.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133836139 133890020 + Ahdc1 protein_coding processed_transcript MGP_WSBEiJ_T0067158.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133836161 133884200 + Ahdc1 protein_coding processed_transcript MGP_WSBEiJ_T0067159.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133836434 133907587 + Ahdc1 protein_coding processed_transcript MGP_WSBEiJ_T0067160.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133836646 133889731 + Ahdc1 protein_coding processed_transcript MGP_WSBEiJ_T0067161.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133836688 133890685 + Ahdc1 protein_coding processed_transcript MGP_WSBEiJ_T0067162.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133836800 133907588 + MGP_WSBEiJ_P0067162 Ahdc1 protein_coding protein_coding MGP_WSBEiJ_T0067163.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133868668 133906177 + MGP_WSBEiJ_P0067163 Ahdc1 protein_coding protein_coding MGP_WSBEiJ_T0067164.1 MGP_WSBEiJ_G0028094.1 mouse_genomes_project 4 133895160 133900980 + Ahdc1 protein_coding processed_transcript MGP_WSBEiJ_T0014257.1 MGP_WSBEiJ_G0012387.1 mouse_genomes_project 4 98909958 98910355 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014308.1 MGP_WSBEiJ_G0012438.1 mouse_genomes_project 4 116835140 116835943 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014284.1 MGP_WSBEiJ_G0012414.1 mouse_genomes_project 4 108139949 108140745 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064394.1 MGP_WSBEiJ_G0027458.1 mouse_genomes_project 4 43054289 43089899 + MGP_WSBEiJ_P0064394 Trmt10b protein_coding protein_coding MGP_WSBEiJ_T0064395.1 MGP_WSBEiJ_G0027458.1 mouse_genomes_project 4 43054317 43061546 + MGP_WSBEiJ_P0064395 Trmt10b protein_coding protein_coding MGP_WSBEiJ_T0064396.1 MGP_WSBEiJ_G0027458.1 mouse_genomes_project 4 43057581 43071953 + Trmt10b protein_coding processed_transcript MGP_WSBEiJ_T0064397.1 MGP_WSBEiJ_G0027458.1 mouse_genomes_project 4 43057601 43088910 + Trmt10b protein_coding processed_transcript MGP_WSBEiJ_T0064398.1 MGP_WSBEiJ_G0027458.1 mouse_genomes_project 4 43057601 43061543 + Trmt10b protein_coding processed_transcript MGP_WSBEiJ_T0064399.1 MGP_WSBEiJ_G0027458.1 mouse_genomes_project 4 43057601 43088910 + MGP_WSBEiJ_P0064399 Trmt10b protein_coding protein_coding MGP_WSBEiJ_T0064400.1 MGP_WSBEiJ_G0027458.1 mouse_genomes_project 4 43087865 43088816 + Trmt10b protein_coding processed_transcript MGP_WSBEiJ_T0067202.1 MGP_WSBEiJ_G0028104.1 mouse_genomes_project 4 134362622 134371734 - MGP_WSBEiJ_P0067202 Trnp1 protein_coding protein_coding MGP_WSBEiJ_T0067203.1 MGP_WSBEiJ_G0028104.1 mouse_genomes_project 4 134362640 134370903 - Trnp1 protein_coding processed_transcript MGP_WSBEiJ_T0017521.1 MGP_WSBEiJ_G0015007.1 mouse_genomes_project 4 157960583 157986054 - 5830444B04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017522.1 MGP_WSBEiJ_G0015007.1 mouse_genomes_project 4 157969829 157978921 - 5830444B04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017523.1 MGP_WSBEiJ_G0015007.1 mouse_genomes_project 4 157969830 157986054 - 5830444B04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017524.1 MGP_WSBEiJ_G0015007.1 mouse_genomes_project 4 157971076 157978900 - 5830444B04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0067174.1 MGP_WSBEiJ_G0028097.1 mouse_genomes_project 4 134048597 134060303 + Cd164l2 protein_coding processed_transcript MGP_WSBEiJ_T0067175.1 MGP_WSBEiJ_G0028097.1 mouse_genomes_project 4 134059343 134063077 + MGP_WSBEiJ_P0067175 Cd164l2 protein_coding protein_coding MGP_WSBEiJ_T0067176.1 MGP_WSBEiJ_G0028097.1 mouse_genomes_project 4 134059980 134063077 + Cd164l2 protein_coding processed_transcript MGP_WSBEiJ_T0067177.1 MGP_WSBEiJ_G0028097.1 mouse_genomes_project 4 134060066 134062764 + Cd164l2 protein_coding retained_intron MGP_WSBEiJ_T0064835.1 MGP_WSBEiJ_G0027576.1 mouse_genomes_project 4 61648515 61660757 - MGP_WSBEiJ_P0064835 Ambp protein_coding protein_coding MGP_WSBEiJ_T0064836.1 MGP_WSBEiJ_G0027576.1 mouse_genomes_project 4 61659280 61661383 - MGP_WSBEiJ_P0064836 Ambp protein_coding protein_coding MGP_WSBEiJ_T0004425.1 MGP_WSBEiJ_G0003846.1 mouse_genomes_project 4 109277876 109278292 - Ttc39aos1 antisense antisense MGP_WSBEiJ_T0004426.1 MGP_WSBEiJ_G0003846.1 mouse_genomes_project 4 109277891 109281188 - Ttc39aos1 antisense antisense MGP_WSBEiJ_T0004434.1 MGP_WSBEiJ_G0003853.1 mouse_genomes_project 4 116898758 116899605 - 1700021J08Rik antisense antisense MGP_WSBEiJ_T0067649.1 MGP_WSBEiJ_G0028201.1 mouse_genomes_project 4 139607117 139610130 - MGP_WSBEiJ_P0067649 Pink1 protein_coding protein_coding MGP_WSBEiJ_T0067650.1 MGP_WSBEiJ_G0028201.1 mouse_genomes_project 4 139607120 139622624 - MGP_WSBEiJ_P0067650 Pink1 protein_coding protein_coding MGP_WSBEiJ_T0067651.1 MGP_WSBEiJ_G0028201.1 mouse_genomes_project 4 139607630 139622557 - MGP_WSBEiJ_P0067651 Pink1 protein_coding protein_coding MGP_WSBEiJ_T0067655.1 MGP_WSBEiJ_G0028204.1 mouse_genomes_project 4 139745309 139752900 + MGP_WSBEiJ_P0067655 Mul1 protein_coding protein_coding MGP_WSBEiJ_T0067656.1 MGP_WSBEiJ_G0028204.1 mouse_genomes_project 4 139745315 139752897 + MGP_WSBEiJ_P0067656 Mul1 protein_coding protein_coding MGP_WSBEiJ_T0067657.1 MGP_WSBEiJ_G0028204.1 mouse_genomes_project 4 139745361 139749656 + MGP_WSBEiJ_P0067657 Mul1 protein_coding protein_coding MGP_WSBEiJ_T0007905.1 MGP_WSBEiJ_G0006462.1 mouse_genomes_project 4 157157929 157158548 - Gm27202 lincRNA lincRNA MGP_WSBEiJ_T0014393.1 MGP_WSBEiJ_G0012523.1 mouse_genomes_project 4 149881168 149881501 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064665.1 MGP_WSBEiJ_G0027532.1 mouse_genomes_project 4 55249956 55413961 - MGP_WSBEiJ_P0064665 protein_coding protein_coding MGP_WSBEiJ_T0064666.1 MGP_WSBEiJ_G0027532.1 mouse_genomes_project 4 55253662 55290125 - MGP_WSBEiJ_P0064666 protein_coding protein_coding MGP_WSBEiJ_T0064667.1 MGP_WSBEiJ_G0027532.1 mouse_genomes_project 4 55326264 55413959 - MGP_WSBEiJ_P0064667 protein_coding protein_coding MGP_WSBEiJ_T0064668.1 MGP_WSBEiJ_G0027532.1 mouse_genomes_project 4 55327570 55336941 - protein_coding processed_transcript MGP_WSBEiJ_T0064669.1 MGP_WSBEiJ_G0027532.1 mouse_genomes_project 4 55339681 55369927 - protein_coding processed_transcript MGP_WSBEiJ_T0064670.1 MGP_WSBEiJ_G0027532.1 mouse_genomes_project 4 55345317 55407093 - protein_coding processed_transcript MGP_WSBEiJ_T0064671.1 MGP_WSBEiJ_G0027532.1 mouse_genomes_project 4 55354481 55387244 - protein_coding processed_transcript MGP_WSBEiJ_T0098257.1 MGP_WSBEiJ_G0036920.1 mouse_genomes_project 4 60738238 60738345 + Gm23148 snRNA snRNA MGP_WSBEiJ_T0065146.1 MGP_WSBEiJ_G0027650.1 mouse_genomes_project 4 88137625 88138123 - MGP_WSBEiJ_P0065146 4930553M12Rik protein_coding protein_coding MGP_WSBEiJ_T0068352.1 MGP_WSBEiJ_G0028372.1 mouse_genomes_project 4 154637966 154639139 - MGP_WSBEiJ_P0068352 Hes3 protein_coding protein_coding MGP_WSBEiJ_T0067086.1 MGP_WSBEiJ_G0028078.1 mouse_genomes_project 4 133097514 133111349 - MGP_WSBEiJ_P0067086 Rcc1 protein_coding protein_coding MGP_WSBEiJ_T0067087.1 MGP_WSBEiJ_G0028078.1 mouse_genomes_project 4 133097518 133111307 - MGP_WSBEiJ_P0067087 Rcc1 protein_coding protein_coding MGP_WSBEiJ_T0067088.1 MGP_WSBEiJ_G0028078.1 mouse_genomes_project 4 133097518 133117171 - MGP_WSBEiJ_P0067088 Rcc1 protein_coding protein_coding MGP_WSBEiJ_T0067089.1 MGP_WSBEiJ_G0028078.1 mouse_genomes_project 4 133103247 133105524 - Rcc1 protein_coding processed_transcript MGP_WSBEiJ_T0067090.1 MGP_WSBEiJ_G0028078.1 mouse_genomes_project 4 133103414 133119140 - MGP_WSBEiJ_P0067090 Rcc1 protein_coding protein_coding MGP_WSBEiJ_T0067091.1 MGP_WSBEiJ_G0028078.1 mouse_genomes_project 4 133104306 133111303 - Rcc1 protein_coding retained_intron MGP_WSBEiJ_T0067092.1 MGP_WSBEiJ_G0028078.1 mouse_genomes_project 4 133104552 133110959 - Rcc1 protein_coding retained_intron MGP_WSBEiJ_T0067093.1 MGP_WSBEiJ_G0028078.1 mouse_genomes_project 4 133105083 133111294 - Rcc1 protein_coding retained_intron MGP_WSBEiJ_T0004468.1 MGP_WSBEiJ_G0003880.1 mouse_genomes_project 4 133289310 133295434 - Gm12981 antisense antisense MGP_WSBEiJ_T0017519.1 MGP_WSBEiJ_G0015005.1 mouse_genomes_project 4 157158602 157169838 - Gm13110 processed_transcript processed_transcript MGP_WSBEiJ_T0007746.1 MGP_WSBEiJ_G0006336.1 mouse_genomes_project 4 62153209 62161061 - lincRNA lincRNA MGP_WSBEiJ_T0010396.1 MGP_WSBEiJ_G0008553.1 mouse_genomes_project 4 109902 110004 + Mir3471-2 miRNA miRNA MGP_WSBEiJ_T0063799.1 MGP_WSBEiJ_G0027338.1 mouse_genomes_project 4 29110110 29168952 + MGP_WSBEiJ_P0063799 Map3k7 protein_coding protein_coding MGP_WSBEiJ_T0063800.1 MGP_WSBEiJ_G0027338.1 mouse_genomes_project 4 29110253 29163996 + MGP_WSBEiJ_P0063800 Map3k7 protein_coding protein_coding MGP_WSBEiJ_T0063801.1 MGP_WSBEiJ_G0027338.1 mouse_genomes_project 4 29123339 29132782 + Map3k7 protein_coding processed_transcript MGP_WSBEiJ_T0063802.1 MGP_WSBEiJ_G0027338.1 mouse_genomes_project 4 29125574 29130337 + Map3k7 protein_coding processed_transcript MGP_WSBEiJ_T0063803.1 MGP_WSBEiJ_G0027338.1 mouse_genomes_project 4 29127645 29136800 + Map3k7 protein_coding processed_transcript MGP_WSBEiJ_T0063804.1 MGP_WSBEiJ_G0027338.1 mouse_genomes_project 4 29130282 29160323 + Map3k7 protein_coding processed_transcript MGP_WSBEiJ_T0063805.1 MGP_WSBEiJ_G0027338.1 mouse_genomes_project 4 29136497 29163875 + Map3k7 protein_coding processed_transcript MGP_WSBEiJ_T0099576.1 MGP_WSBEiJ_G0038239.1 mouse_genomes_project 4 138171987 138172116 + Gm23834 snoRNA snoRNA MGP_WSBEiJ_T0010458.1 MGP_WSBEiJ_G0008615.1 mouse_genomes_project 4 132966080 132966176 - Gm22033 miRNA miRNA MGP_WSBEiJ_T0007769.1 MGP_WSBEiJ_G0006356.1 mouse_genomes_project 4 89463826 89468307 + Gm12629 lincRNA lincRNA MGP_WSBEiJ_T0067321.1 MGP_WSBEiJ_G0028127.1 mouse_genomes_project 4 135192450 135195557 + MGP_WSBEiJ_P0067321 Gm30191 protein_coding protein_coding MGP_WSBEiJ_T0007893.1 MGP_WSBEiJ_G0006450.1 mouse_genomes_project 4 150398599 150401694 - Gm13200 lincRNA lincRNA MGP_WSBEiJ_T0014340.1 MGP_WSBEiJ_G0012470.1 mouse_genomes_project 4 124227942 124228264 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014290.1 MGP_WSBEiJ_G0012420.1 mouse_genomes_project 4 109248057 109249216 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007699.1 MGP_WSBEiJ_G0006296.1 mouse_genomes_project 4 23536339 23616569 - 4930548K13Rik lincRNA lincRNA MGP_WSBEiJ_T0007843.1 MGP_WSBEiJ_G0006411.1 mouse_genomes_project 4 129972476 129982597 + Gm26722 lincRNA lincRNA MGP_WSBEiJ_T0064878.1 MGP_WSBEiJ_G0027586.1 mouse_genomes_project 4 62224975 62225986 - Gm11214 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0064879.1 MGP_WSBEiJ_G0027586.1 mouse_genomes_project 4 62224975 62225527 - MGP_WSBEiJ_P0064879 Gm11214 protein_coding protein_coding MGP_WSBEiJ_T0014291.1 MGP_WSBEiJ_G0012421.1 mouse_genomes_project 4 109506798 109507942 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001385.1 MGP_WSBEiJ_G0001314.1 mouse_genomes_project 4 132837736 132843046 - TEC TEC MGP_WSBEiJ_T0014104.1 MGP_WSBEiJ_G0012234.1 mouse_genomes_project 4 37320637 37321325 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014203.1 MGP_WSBEiJ_G0012333.1 mouse_genomes_project 4 77127764 77128706 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001373.1 MGP_WSBEiJ_G0001302.1 mouse_genomes_project 4 19263032 19266645 + TEC TEC MGP_WSBEiJ_T0065837.1 MGP_WSBEiJ_G0027793.1 mouse_genomes_project 4 111835332 111887747 - MGP_WSBEiJ_P0065837 Slc5a9 protein_coding protein_coding MGP_WSBEiJ_T0065838.1 MGP_WSBEiJ_G0027793.1 mouse_genomes_project 4 111835386 111847304 - Slc5a9 protein_coding processed_transcript MGP_WSBEiJ_T0065839.1 MGP_WSBEiJ_G0027793.1 mouse_genomes_project 4 111836229 111862647 - MGP_WSBEiJ_P0065839 Slc5a9 protein_coding protein_coding MGP_WSBEiJ_T0065840.1 MGP_WSBEiJ_G0027793.1 mouse_genomes_project 4 111837209 111887580 - MGP_WSBEiJ_P0065840 Slc5a9 protein_coding protein_coding MGP_WSBEiJ_T0065841.1 MGP_WSBEiJ_G0027793.1 mouse_genomes_project 4 111837452 111840592 - Slc5a9 protein_coding processed_transcript MGP_WSBEiJ_T0065842.1 MGP_WSBEiJ_G0027793.1 mouse_genomes_project 4 111853034 111860258 - MGP_WSBEiJ_P0065842 Slc5a9 protein_coding protein_coding MGP_WSBEiJ_T0065843.1 MGP_WSBEiJ_G0027793.1 mouse_genomes_project 4 111853363 111854863 - Slc5a9 protein_coding processed_transcript MGP_WSBEiJ_T0065844.1 MGP_WSBEiJ_G0027793.1 mouse_genomes_project 4 111853402 111854128 - Slc5a9 protein_coding processed_transcript MGP_WSBEiJ_T0099492.1 MGP_WSBEiJ_G0038155.1 mouse_genomes_project 4 412343 412480 - Gm22781 snoRNA snoRNA MGP_WSBEiJ_T0067182.1 MGP_WSBEiJ_G0028099.1 mouse_genomes_project 4 134098535 134108559 - MGP_WSBEiJ_P0067182 Sytl1 protein_coding protein_coding MGP_WSBEiJ_T0067183.1 MGP_WSBEiJ_G0028099.1 mouse_genomes_project 4 134098535 134108533 - MGP_WSBEiJ_P0067183 Sytl1 protein_coding protein_coding MGP_WSBEiJ_T0067184.1 MGP_WSBEiJ_G0028099.1 mouse_genomes_project 4 134098543 134108533 - Sytl1 protein_coding processed_transcript MGP_WSBEiJ_T0067185.1 MGP_WSBEiJ_G0028099.1 mouse_genomes_project 4 134098606 134108498 - Sytl1 protein_coding processed_transcript MGP_WSBEiJ_T0001386.1 MGP_WSBEiJ_G0001315.1 mouse_genomes_project 4 136494829 136495159 + TEC TEC MGP_WSBEiJ_T0010441.1 MGP_WSBEiJ_G0008598.1 mouse_genomes_project 4 108881497 108881573 + Mir761 miRNA miRNA MGP_WSBEiJ_T0098311.1 MGP_WSBEiJ_G0036974.1 mouse_genomes_project 4 146575560 146575726 - Gm25938 snRNA snRNA MGP_WSBEiJ_T0098318.1 MGP_WSBEiJ_G0036981.1 mouse_genomes_project 4 158302089 158302191 - Gm22573 snRNA snRNA MGP_WSBEiJ_T0099548.1 MGP_WSBEiJ_G0038211.1 mouse_genomes_project 4 105841380 105841493 - Gm26047 snoRNA snoRNA MGP_WSBEiJ_T0100836.1 MGP_WSBEiJ_G0039294.1 mouse_genomes_project 4 121561546 121566497 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0066803.1 MGP_WSBEiJ_G0028025.1 mouse_genomes_project 4 129832293 129864210 + MGP_WSBEiJ_P0066803 protein_coding protein_coding MGP_WSBEiJ_T0066804.1 MGP_WSBEiJ_G0028025.1 mouse_genomes_project 4 129832434 129839954 + protein_coding retained_intron MGP_WSBEiJ_T0066805.1 MGP_WSBEiJ_G0028025.1 mouse_genomes_project 4 129839627 129853874 + MGP_WSBEiJ_P0066805 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066806.1 MGP_WSBEiJ_G0028025.1 mouse_genomes_project 4 129839746 129851926 + protein_coding processed_transcript MGP_WSBEiJ_T0066807.1 MGP_WSBEiJ_G0028025.1 mouse_genomes_project 4 129852849 129854133 + protein_coding retained_intron MGP_WSBEiJ_T0066808.1 MGP_WSBEiJ_G0028025.1 mouse_genomes_project 4 129855522 129860343 + protein_coding retained_intron MGP_WSBEiJ_T0066809.1 MGP_WSBEiJ_G0028025.1 mouse_genomes_project 4 129855974 129863266 + protein_coding processed_transcript MGP_WSBEiJ_T0066810.1 MGP_WSBEiJ_G0028025.1 mouse_genomes_project 4 129858375 129859544 + protein_coding retained_intron MGP_WSBEiJ_T0064422.1 MGP_WSBEiJ_G0027464.1 mouse_genomes_project 4 43622452 43639871 - MGP_WSBEiJ_P0064422 Igfbpl1 protein_coding protein_coding MGP_WSBEiJ_T0064423.1 MGP_WSBEiJ_G0027464.1 mouse_genomes_project 4 43626018 43629371 - Igfbpl1 protein_coding processed_transcript MGP_WSBEiJ_T0065742.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108924389 108984187 - MGP_WSBEiJ_P0065742 Osbpl9 protein_coding protein_coding MGP_WSBEiJ_T0065743.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108924859 109073113 - MGP_WSBEiJ_P0065743 Osbpl9 protein_coding protein_coding MGP_WSBEiJ_T0065744.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108924894 108984201 - MGP_WSBEiJ_P0065744 Osbpl9 protein_coding protein_coding MGP_WSBEiJ_T0065745.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108924899 109073151 - MGP_WSBEiJ_P0065745 Osbpl9 protein_coding protein_coding MGP_WSBEiJ_T0065746.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108924899 109073113 - MGP_WSBEiJ_P0065746 Osbpl9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065747.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108924899 109073096 - MGP_WSBEiJ_P0065747 Osbpl9 protein_coding protein_coding MGP_WSBEiJ_T0065748.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108925218 108951309 - Osbpl9 protein_coding processed_transcript MGP_WSBEiJ_T0065749.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108925323 109073151 - MGP_WSBEiJ_P0065749 Osbpl9 protein_coding protein_coding MGP_WSBEiJ_T0065750.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108925331 109023738 - MGP_WSBEiJ_P0065750 Osbpl9 protein_coding protein_coding MGP_WSBEiJ_T0065751.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108928265 108929818 - Osbpl9 protein_coding processed_transcript MGP_WSBEiJ_T0065752.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108931836 108935944 - Osbpl9 protein_coding processed_transcript MGP_WSBEiJ_T0065753.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108932190 108983863 - Osbpl9 protein_coding processed_transcript MGP_WSBEiJ_T0065754.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108946948 108975944 - Osbpl9 protein_coding processed_transcript MGP_WSBEiJ_T0065755.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108947072 109023924 - Osbpl9 protein_coding retained_intron MGP_WSBEiJ_T0065756.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108950261 108952639 - Osbpl9 protein_coding retained_intron MGP_WSBEiJ_T0065757.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108951269 108974210 - Osbpl9 protein_coding processed_transcript MGP_WSBEiJ_T0065758.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108951306 109024253 - Osbpl9 protein_coding processed_transcript MGP_WSBEiJ_T0065759.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 108999810 109073115 - Osbpl9 protein_coding processed_transcript MGP_WSBEiJ_T0065760.1 MGP_WSBEiJ_G0027780.1 mouse_genomes_project 4 109040785 109073113 - Osbpl9 protein_coding retained_intron MGP_WSBEiJ_T0098264.1 MGP_WSBEiJ_G0036927.1 mouse_genomes_project 4 85158836 85158937 - Gm25811 snRNA snRNA MGP_WSBEiJ_T0014234.1 MGP_WSBEiJ_G0012364.1 mouse_genomes_project 4 90493296 90493902 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068753.1 MGP_WSBEiJ_G0028443.1 mouse_genomes_project 4 158812324 158814169 + MGP_WSBEiJ_P0068753 protein_coding protein_coding MGP_WSBEiJ_T0064339.1 MGP_WSBEiJ_G0027450.1 mouse_genomes_project 4 42008432 42068576 + MGP_WSBEiJ_P0064339 Melk protein_coding protein_coding MGP_WSBEiJ_T0064340.1 MGP_WSBEiJ_G0027450.1 mouse_genomes_project 4 42010211 42035227 + MGP_WSBEiJ_P0064340 Melk protein_coding protein_coding MGP_WSBEiJ_T0064341.1 MGP_WSBEiJ_G0027450.1 mouse_genomes_project 4 42011112 42033802 + Melk protein_coding processed_transcript MGP_WSBEiJ_T0064342.1 MGP_WSBEiJ_G0027450.1 mouse_genomes_project 4 42011112 42027617 + MGP_WSBEiJ_P0064342 Melk protein_coding protein_coding MGP_WSBEiJ_T0014146.1 MGP_WSBEiJ_G0012276.1 mouse_genomes_project 4 53326894 53327503 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007735.1 MGP_WSBEiJ_G0006327.1 mouse_genomes_project 4 54180708 54205883 - Gm12519 lincRNA lincRNA MGP_WSBEiJ_T0014013.1 MGP_WSBEiJ_G0012143.1 mouse_genomes_project 4 8351323 8352176 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064625.1 MGP_WSBEiJ_G0027521.1 mouse_genomes_project 4 53098831 53166557 + MGP_WSBEiJ_P0064625 Zfp462 protein_coding protein_coding MGP_WSBEiJ_T0064626.1 MGP_WSBEiJ_G0027521.1 mouse_genomes_project 4 53101789 53242258 + MGP_WSBEiJ_P0064626 Zfp462 protein_coding protein_coding MGP_WSBEiJ_T0064627.1 MGP_WSBEiJ_G0027521.1 mouse_genomes_project 4 53169623 53240050 + MGP_WSBEiJ_P0064627 Zfp462 protein_coding protein_coding MGP_WSBEiJ_T0064628.1 MGP_WSBEiJ_G0027521.1 mouse_genomes_project 4 53169737 53240022 + MGP_WSBEiJ_P0064628 Zfp462 protein_coding protein_coding MGP_WSBEiJ_T0063676.1 MGP_WSBEiJ_G0027305.1 mouse_genomes_project 4 12748835 12785453 + MGP_WSBEiJ_P0063676 Nbn protein_coding protein_coding MGP_WSBEiJ_T0063677.1 MGP_WSBEiJ_G0027305.1 mouse_genomes_project 4 12748877 12774414 + MGP_WSBEiJ_P0063677 Nbn protein_coding protein_coding MGP_WSBEiJ_T0064920.1 MGP_WSBEiJ_G0027600.1 mouse_genomes_project 4 72659026 72662167 - 2310002L09Rik protein_coding processed_transcript MGP_WSBEiJ_T0064921.1 MGP_WSBEiJ_G0027600.1 mouse_genomes_project 4 72659026 72671411 - MGP_WSBEiJ_P0064921 2310002L09Rik protein_coding protein_coding MGP_WSBEiJ_T0064922.1 MGP_WSBEiJ_G0027600.1 mouse_genomes_project 4 72661944 72671410 - MGP_WSBEiJ_P0064922 2310002L09Rik protein_coding protein_coding MGP_WSBEiJ_T0004497.1 MGP_WSBEiJ_G0003904.1 mouse_genomes_project 4 143580544 143584421 + Fhad1os1 antisense antisense MGP_WSBEiJ_T0007900.1 MGP_WSBEiJ_G0006457.1 mouse_genomes_project 4 153056895 153072114 + Gm13049 lincRNA lincRNA MGP_WSBEiJ_T0014302.1 MGP_WSBEiJ_G0012432.1 mouse_genomes_project 4 115248207 115248684 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065231.1 MGP_WSBEiJ_G0027671.1 mouse_genomes_project 4 95406817 95435225 - MGP_WSBEiJ_P0065231 Cyp2j13 protein_coding protein_coding MGP_WSBEiJ_T0065232.1 MGP_WSBEiJ_G0027671.1 mouse_genomes_project 4 95421778 95455840 - MGP_WSBEiJ_P0065232 Cyp2j13 protein_coding protein_coding MGP_WSBEiJ_T0065233.1 MGP_WSBEiJ_G0027671.1 mouse_genomes_project 4 95424349 95455846 - MGP_WSBEiJ_P0065233 Cyp2j13 protein_coding protein_coding MGP_WSBEiJ_T0065234.1 MGP_WSBEiJ_G0027671.1 mouse_genomes_project 4 95424349 95455824 - MGP_WSBEiJ_P0065234 Cyp2j13 protein_coding protein_coding MGP_WSBEiJ_T0067487.1 MGP_WSBEiJ_G0028165.1 mouse_genomes_project 4 137080641 137100419 - MGP_WSBEiJ_P0067487 Tceb3 protein_coding protein_coding MGP_WSBEiJ_T0004382.1 MGP_WSBEiJ_G0003817.1 mouse_genomes_project 4 58317627 58322578 - Gm12542 antisense antisense MGP_WSBEiJ_T0004416.1 MGP_WSBEiJ_G0003841.1 mouse_genomes_project 4 106898244 106909006 + Gm12802 antisense antisense MGP_WSBEiJ_T0067063.1 MGP_WSBEiJ_G0028074.1 mouse_genomes_project 4 132968577 133007488 - MGP_WSBEiJ_P0067063 Gmeb1 protein_coding protein_coding MGP_WSBEiJ_T0067064.1 MGP_WSBEiJ_G0028074.1 mouse_genomes_project 4 132970912 133017554 - MGP_WSBEiJ_P0067064 Gmeb1 protein_coding protein_coding MGP_WSBEiJ_T0067065.1 MGP_WSBEiJ_G0028074.1 mouse_genomes_project 4 132972997 133006846 - MGP_WSBEiJ_P0067065 Gmeb1 protein_coding protein_coding MGP_WSBEiJ_T0067066.1 MGP_WSBEiJ_G0028074.1 mouse_genomes_project 4 132973650 133017635 - MGP_WSBEiJ_P0067066 Gmeb1 protein_coding protein_coding MGP_WSBEiJ_T0067067.1 MGP_WSBEiJ_G0028074.1 mouse_genomes_project 4 132981322 132984711 - Gmeb1 protein_coding retained_intron MGP_WSBEiJ_T0067068.1 MGP_WSBEiJ_G0028074.1 mouse_genomes_project 4 132986497 132997841 - Gmeb1 protein_coding retained_intron MGP_WSBEiJ_T0067069.1 MGP_WSBEiJ_G0028074.1 mouse_genomes_project 4 133006757 133009246 - Gmeb1 protein_coding processed_transcript MGP_WSBEiJ_T0004488.1 MGP_WSBEiJ_G0003897.1 mouse_genomes_project 4 142484165 142494379 - Gm13031 antisense antisense MGP_WSBEiJ_T0010477.1 MGP_WSBEiJ_G0008634.1 mouse_genomes_project 4 142912690 142912767 + Gm25690 miRNA miRNA MGP_WSBEiJ_T0014211.1 MGP_WSBEiJ_G0012341.1 mouse_genomes_project 4 80700276 80700986 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004456.1 MGP_WSBEiJ_G0003871.1 mouse_genomes_project 4 125458607 125460683 - Gm12932 antisense antisense MGP_WSBEiJ_T0066430.1 MGP_WSBEiJ_G0027930.1 mouse_genomes_project 4 121266722 121270298 - MGP_WSBEiJ_P0066430 Tmco2 protein_coding protein_coding MGP_WSBEiJ_T0014139.1 MGP_WSBEiJ_G0012269.1 mouse_genomes_project 4 51810765 51811814 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067151.1 MGP_WSBEiJ_G0028093.1 mouse_genomes_project 4 133790893 133802513 + Fgr protein_coding processed_transcript MGP_WSBEiJ_T0067152.1 MGP_WSBEiJ_G0028093.1 mouse_genomes_project 4 133790900 133824633 + MGP_WSBEiJ_P0067152 Fgr protein_coding protein_coding MGP_WSBEiJ_T0067153.1 MGP_WSBEiJ_G0028093.1 mouse_genomes_project 4 133793915 133823475 + Fgr protein_coding processed_transcript MGP_WSBEiJ_T0063746.1 MGP_WSBEiJ_G0027326.1 mouse_genomes_project 4 18765671 18838632 + Faxc protein_coding processed_transcript MGP_WSBEiJ_T0063747.1 MGP_WSBEiJ_G0027326.1 mouse_genomes_project 4 18765673 18839237 + MGP_WSBEiJ_P0063747 Faxc protein_coding protein_coding MGP_WSBEiJ_T0063748.1 MGP_WSBEiJ_G0027326.1 mouse_genomes_project 4 18765675 18789580 + Faxc protein_coding processed_transcript MGP_WSBEiJ_T0063749.1 MGP_WSBEiJ_G0027326.1 mouse_genomes_project 4 18765699 18841325 + Faxc protein_coding processed_transcript MGP_WSBEiJ_T0063750.1 MGP_WSBEiJ_G0027326.1 mouse_genomes_project 4 18797010 18799362 + Faxc protein_coding processed_transcript MGP_WSBEiJ_T0064414.1 MGP_WSBEiJ_G0027462.1 mouse_genomes_project 4 43219154 43280138 - Shb protein_coding processed_transcript MGP_WSBEiJ_T0064415.1 MGP_WSBEiJ_G0027462.1 mouse_genomes_project 4 43219154 43329588 - MGP_WSBEiJ_P0064415 Shb protein_coding protein_coding MGP_WSBEiJ_T0064416.1 MGP_WSBEiJ_G0027462.1 mouse_genomes_project 4 43240541 43290191 - Shb protein_coding processed_transcript MGP_WSBEiJ_T0064417.1 MGP_WSBEiJ_G0027462.1 mouse_genomes_project 4 43243501 43286750 - Shb protein_coding retained_intron MGP_WSBEiJ_T0064418.1 MGP_WSBEiJ_G0027462.1 mouse_genomes_project 4 43254181 43287142 - MGP_WSBEiJ_P0064418 Shb protein_coding protein_coding MGP_WSBEiJ_T0064419.1 MGP_WSBEiJ_G0027462.1 mouse_genomes_project 4 43254372 43331728 - MGP_WSBEiJ_P0064419 Shb protein_coding protein_coding MGP_WSBEiJ_T0001388.1 MGP_WSBEiJ_G0001317.1 mouse_genomes_project 4 141807372 141810007 - TEC TEC MGP_WSBEiJ_T0065590.1 MGP_WSBEiJ_G0027752.1 mouse_genomes_project 4 107153771 107208508 + MGP_WSBEiJ_P0065590 Ndc1 protein_coding protein_coding MGP_WSBEiJ_T0065591.1 MGP_WSBEiJ_G0027752.1 mouse_genomes_project 4 107153867 107206492 + MGP_WSBEiJ_P0065591 Ndc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065592.1 MGP_WSBEiJ_G0027752.1 mouse_genomes_project 4 107153902 107208485 + MGP_WSBEiJ_P0065592 Ndc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065593.1 MGP_WSBEiJ_G0027752.1 mouse_genomes_project 4 107154039 107200907 + MGP_WSBEiJ_P0065593 Ndc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065594.1 MGP_WSBEiJ_G0027752.1 mouse_genomes_project 4 107168556 107174663 + Ndc1 protein_coding processed_transcript MGP_WSBEiJ_T0065595.1 MGP_WSBEiJ_G0027752.1 mouse_genomes_project 4 107168931 107178290 + Ndc1 protein_coding retained_intron MGP_WSBEiJ_T0065477.1 MGP_WSBEiJ_G0027733.1 mouse_genomes_project 4 106299016 106328056 + MGP_WSBEiJ_P0065477 Dhcr24 protein_coding protein_coding MGP_WSBEiJ_T0017457.1 MGP_WSBEiJ_G0014968.1 mouse_genomes_project 4 50927794 50942683 + 4930552N02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0065697.1 MGP_WSBEiJ_G0027770.1 mouse_genomes_project 4 108434643 108451015 + Orc1 protein_coding processed_transcript MGP_WSBEiJ_T0065698.1 MGP_WSBEiJ_G0027770.1 mouse_genomes_project 4 108434654 108451156 + Orc1 protein_coding processed_transcript MGP_WSBEiJ_T0065699.1 MGP_WSBEiJ_G0027770.1 mouse_genomes_project 4 108434674 108470009 + MGP_WSBEiJ_P0065699 Orc1 protein_coding protein_coding MGP_WSBEiJ_T0065700.1 MGP_WSBEiJ_G0027770.1 mouse_genomes_project 4 108442585 108443340 + Orc1 protein_coding processed_transcript MGP_WSBEiJ_T0065701.1 MGP_WSBEiJ_G0027770.1 mouse_genomes_project 4 108459127 108461080 + Orc1 protein_coding processed_transcript MGP_WSBEiJ_T0064784.1 MGP_WSBEiJ_G0027564.1 mouse_genomes_project 4 60840344 60873715 + MGP_WSBEiJ_P0064784 Slc31a1 protein_coding protein_coding MGP_WSBEiJ_T0064785.1 MGP_WSBEiJ_G0027564.1 mouse_genomes_project 4 60866335 60873715 + MGP_WSBEiJ_P0064785 Slc31a1 protein_coding protein_coding MGP_WSBEiJ_T0099546.1 MGP_WSBEiJ_G0038209.1 mouse_genomes_project 4 102341507 102341635 + Gm24869 snoRNA snoRNA MGP_WSBEiJ_T0065186.1 MGP_WSBEiJ_G0027665.1 mouse_genomes_project 4 94102291 94237707 + MGP_WSBEiJ_P0065186 Tek protein_coding unknown_likely_coding MGP_WSBEiJ_T0065187.1 MGP_WSBEiJ_G0027665.1 mouse_genomes_project 4 94106164 94237739 + MGP_WSBEiJ_P0065187 Tek protein_coding protein_coding MGP_WSBEiJ_T0065188.1 MGP_WSBEiJ_G0027665.1 mouse_genomes_project 4 94106393 94237707 + MGP_WSBEiJ_P0065188 Tek protein_coding protein_coding MGP_WSBEiJ_T0065189.1 MGP_WSBEiJ_G0027665.1 mouse_genomes_project 4 94168733 94177803 + Tek protein_coding processed_transcript MGP_WSBEiJ_T0066264.1 MGP_WSBEiJ_G0027886.1 mouse_genomes_project 4 118711567 118712506 + MGP_WSBEiJ_P0066264 Olfr1341 protein_coding protein_coding MGP_WSBEiJ_T0067322.1 MGP_WSBEiJ_G0028128.1 mouse_genomes_project 4 135196624 135199610 - MGP_WSBEiJ_P0067322 Grrp1 protein_coding protein_coding MGP_WSBEiJ_T0067323.1 MGP_WSBEiJ_G0028128.1 mouse_genomes_project 4 135197220 135198526 - Grrp1 protein_coding processed_transcript MGP_WSBEiJ_T0014057.1 MGP_WSBEiJ_G0012187.1 mouse_genomes_project 4 22741947 22742414 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014014.1 MGP_WSBEiJ_G0012144.1 mouse_genomes_project 4 10186417 10186789 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067061.1 MGP_WSBEiJ_G0028072.1 mouse_genomes_project 4 132844412 132881761 - MGP_WSBEiJ_P0067061 Oprd1 protein_coding protein_coding MGP_WSBEiJ_T0065318.1 MGP_WSBEiJ_G0027693.1 mouse_genomes_project 4 99165519 99167842 + MGP_WSBEiJ_P0065318 Foxd3 protein_coding protein_coding MGP_WSBEiJ_T0014056.1 MGP_WSBEiJ_G0012186.1 mouse_genomes_project 4 22727876 22728261 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014314.1 MGP_WSBEiJ_G0012444.1 mouse_genomes_project 4 117774110 117774586 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064443.1 MGP_WSBEiJ_G0027469.1 mouse_genomes_project 4 43943616 43968429 - MGP_WSBEiJ_P0064443 Tstd2 protein_coding protein_coding MGP_WSBEiJ_T0064444.1 MGP_WSBEiJ_G0027469.1 mouse_genomes_project 4 43944606 43968392 - MGP_WSBEiJ_P0064444 Tstd2 protein_coding protein_coding MGP_WSBEiJ_T0064445.1 MGP_WSBEiJ_G0027469.1 mouse_genomes_project 4 43952279 43968367 - Tstd2 protein_coding retained_intron MGP_WSBEiJ_T0064446.1 MGP_WSBEiJ_G0027469.1 mouse_genomes_project 4 43958158 43960775 - Tstd2 protein_coding retained_intron MGP_WSBEiJ_T0064447.1 MGP_WSBEiJ_G0027469.1 mouse_genomes_project 4 43960785 43968648 - MGP_WSBEiJ_P0064447 Tstd2 protein_coding protein_coding MGP_WSBEiJ_T0064448.1 MGP_WSBEiJ_G0027469.1 mouse_genomes_project 4 43960848 43968363 - MGP_WSBEiJ_P0064448 Tstd2 protein_coding protein_coding MGP_WSBEiJ_T0064449.1 MGP_WSBEiJ_G0027469.1 mouse_genomes_project 4 43960997 43965737 - MGP_WSBEiJ_P0064449 Tstd2 protein_coding protein_coding MGP_WSBEiJ_T0064450.1 MGP_WSBEiJ_G0027469.1 mouse_genomes_project 4 43965460 43968409 - MGP_WSBEiJ_P0064450 Tstd2 protein_coding protein_coding MGP_WSBEiJ_T0014119.1 MGP_WSBEiJ_G0012249.1 mouse_genomes_project 4 44275143 44275466 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014077.1 MGP_WSBEiJ_G0012207.1 mouse_genomes_project 4 29185929 29187022 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066392.1 MGP_WSBEiJ_G0027919.1 mouse_genomes_project 4 120646550 120683494 - MGP_WSBEiJ_P0066392 Ctps protein_coding protein_coding MGP_WSBEiJ_T0066393.1 MGP_WSBEiJ_G0027919.1 mouse_genomes_project 4 120648593 120651750 - Ctps protein_coding processed_transcript MGP_WSBEiJ_T0066394.1 MGP_WSBEiJ_G0027919.1 mouse_genomes_project 4 120648651 120656727 - Ctps protein_coding processed_transcript MGP_WSBEiJ_T0004485.1 MGP_WSBEiJ_G0003894.1 mouse_genomes_project 4 140563541 140568779 - Gm16287 antisense antisense MGP_WSBEiJ_T0014398.1 MGP_WSBEiJ_G0012528.1 mouse_genomes_project 4 151200689 151201009 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014232.1 MGP_WSBEiJ_G0012362.1 mouse_genomes_project 4 89872213 89872837 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064957.1 MGP_WSBEiJ_G0027608.1 mouse_genomes_project 4 79827984 79831541 + MGP_WSBEiJ_P0064957 Tyrp1 protein_coding protein_coding MGP_WSBEiJ_T0064958.1 MGP_WSBEiJ_G0027608.1 mouse_genomes_project 4 79828091 79846212 + MGP_WSBEiJ_P0064958 Tyrp1 protein_coding protein_coding MGP_WSBEiJ_T0064959.1 MGP_WSBEiJ_G0027608.1 mouse_genomes_project 4 79828165 79846213 + MGP_WSBEiJ_P0064959 Tyrp1 protein_coding protein_coding MGP_WSBEiJ_T0064960.1 MGP_WSBEiJ_G0027608.1 mouse_genomes_project 4 79841054 79845494 + MGP_WSBEiJ_P0064960 Tyrp1 protein_coding protein_coding MGP_WSBEiJ_T0098285.1 MGP_WSBEiJ_G0036948.1 mouse_genomes_project 4 116923382 116923481 + Gm22335 snRNA snRNA MGP_WSBEiJ_T0017508.1 MGP_WSBEiJ_G0014999.1 mouse_genomes_project 4 132614849 132637978 - Gm12992 processed_transcript processed_transcript MGP_WSBEiJ_T0017509.1 MGP_WSBEiJ_G0014999.1 mouse_genomes_project 4 132629545 132632651 - Gm12992 processed_transcript processed_transcript MGP_WSBEiJ_T0067639.1 MGP_WSBEiJ_G0028198.1 mouse_genomes_project 4 139541399 139552351 + MGP_WSBEiJ_P0067639 Sh2d5 protein_coding protein_coding MGP_WSBEiJ_T0067640.1 MGP_WSBEiJ_G0028198.1 mouse_genomes_project 4 139541409 139548302 + MGP_WSBEiJ_P0067640 Sh2d5 protein_coding protein_coding MGP_WSBEiJ_T0067641.1 MGP_WSBEiJ_G0028198.1 mouse_genomes_project 4 139541419 139546715 + Sh2d5 protein_coding processed_transcript MGP_WSBEiJ_T0067643.1 MGP_WSBEiJ_G0028198.1 mouse_genomes_project 4 139541460 139552351 + MGP_WSBEiJ_P0067643 Sh2d5 protein_coding protein_coding MGP_WSBEiJ_T0067644.1 MGP_WSBEiJ_G0028198.1 mouse_genomes_project 4 139547759 139550123 + Sh2d5 protein_coding retained_intron MGP_WSBEiJ_T0065051.1 MGP_WSBEiJ_G0027620.1 mouse_genomes_project 4 83941716 84204592 + MGP_WSBEiJ_P0065051 Cntln protein_coding protein_coding MGP_WSBEiJ_T0065052.1 MGP_WSBEiJ_G0027620.1 mouse_genomes_project 4 83941811 84017847 + MGP_WSBEiJ_P0065052 Cntln protein_coding protein_coding MGP_WSBEiJ_T0065053.1 MGP_WSBEiJ_G0027620.1 mouse_genomes_project 4 83941872 84204588 + MGP_WSBEiJ_P0065053 Cntln protein_coding protein_coding MGP_WSBEiJ_T0065054.1 MGP_WSBEiJ_G0027620.1 mouse_genomes_project 4 84166877 84204589 + MGP_WSBEiJ_P0065054 Cntln protein_coding protein_coding MGP_WSBEiJ_T0014235.1 MGP_WSBEiJ_G0012365.1 mouse_genomes_project 4 90694749 90695311 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014335.1 MGP_WSBEiJ_G0012465.1 mouse_genomes_project 4 123530036 123530609 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014222.1 MGP_WSBEiJ_G0012352.1 mouse_genomes_project 4 85560664 85560993 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010448.1 MGP_WSBEiJ_G0008605.1 mouse_genomes_project 4 121124751 121124815 - Mir7015 miRNA miRNA MGP_WSBEiJ_T0068052.1 MGP_WSBEiJ_G0028317.1 mouse_genomes_project 4 150279140 150329211 - MGP_WSBEiJ_P0068052 Ptchd2 protein_coding protein_coding MGP_WSBEiJ_T0068053.1 MGP_WSBEiJ_G0028317.1 mouse_genomes_project 4 150298303 150300932 - Ptchd2 protein_coding retained_intron MGP_WSBEiJ_T0068054.1 MGP_WSBEiJ_G0028317.1 mouse_genomes_project 4 150299971 150301412 - Ptchd2 protein_coding processed_transcript MGP_WSBEiJ_T0004409.1 MGP_WSBEiJ_G0003834.1 mouse_genomes_project 4 99172517 99224835 - Gm12682 antisense antisense MGP_WSBEiJ_T0064706.1 MGP_WSBEiJ_G0027542.1 mouse_genomes_project 4 56765369 56896361 - MGP_WSBEiJ_P0064706 Lpar1 protein_coding protein_coding MGP_WSBEiJ_T0064707.1 MGP_WSBEiJ_G0027542.1 mouse_genomes_project 4 56765369 56896557 - MGP_WSBEiJ_P0064707 Lpar1 protein_coding protein_coding MGP_WSBEiJ_T0064708.1 MGP_WSBEiJ_G0027542.1 mouse_genomes_project 4 56765369 56896251 - MGP_WSBEiJ_P0064708 Lpar1 protein_coding protein_coding MGP_WSBEiJ_T0064709.1 MGP_WSBEiJ_G0027542.1 mouse_genomes_project 4 56765369 56896632 - MGP_WSBEiJ_P0064709 Lpar1 protein_coding protein_coding MGP_WSBEiJ_T0064710.1 MGP_WSBEiJ_G0027542.1 mouse_genomes_project 4 56765369 56838866 - MGP_WSBEiJ_P0064710 Lpar1 protein_coding protein_coding MGP_WSBEiJ_T0064711.1 MGP_WSBEiJ_G0027542.1 mouse_genomes_project 4 56825504 56891362 - MGP_WSBEiJ_P0064711 Lpar1 protein_coding protein_coding MGP_WSBEiJ_T0064712.1 MGP_WSBEiJ_G0027542.1 mouse_genomes_project 4 56825559 56896902 - MGP_WSBEiJ_P0064712 Lpar1 protein_coding protein_coding MGP_WSBEiJ_T0064713.1 MGP_WSBEiJ_G0027542.1 mouse_genomes_project 4 56825593 56896124 - MGP_WSBEiJ_P0064713 Lpar1 protein_coding protein_coding MGP_WSBEiJ_T0068595.1 MGP_WSBEiJ_G0028412.1 mouse_genomes_project 4 158185961 158208275 + MGP_WSBEiJ_P0068595 Slc35e2 protein_coding protein_coding MGP_WSBEiJ_T0068596.1 MGP_WSBEiJ_G0028412.1 mouse_genomes_project 4 158186156 158205074 + MGP_WSBEiJ_P0068596 Slc35e2 protein_coding protein_coding MGP_WSBEiJ_T0068597.1 MGP_WSBEiJ_G0028412.1 mouse_genomes_project 4 158186489 158204303 + MGP_WSBEiJ_P0068597 Slc35e2 protein_coding protein_coding MGP_WSBEiJ_T0068598.1 MGP_WSBEiJ_G0028412.1 mouse_genomes_project 4 158195177 158204180 + Slc35e2 protein_coding processed_transcript MGP_WSBEiJ_T0014366.1 MGP_WSBEiJ_G0012496.1 mouse_genomes_project 4 136344400 136344590 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065150.1 MGP_WSBEiJ_G0027653.1 mouse_genomes_project 4 88579019 88602224 - MGP_WSBEiJ_P0065150 Cdkn2a protein_coding protein_coding MGP_WSBEiJ_T0066849.1 MGP_WSBEiJ_G0028037.1 mouse_genomes_project 4 130236358 130250334 - MGP_WSBEiJ_P0066849 Lck protein_coding protein_coding MGP_WSBEiJ_T0066850.1 MGP_WSBEiJ_G0028037.1 mouse_genomes_project 4 130236363 130267511 - MGP_WSBEiJ_P0066850 Lck protein_coding protein_coding MGP_WSBEiJ_T0066851.1 MGP_WSBEiJ_G0028037.1 mouse_genomes_project 4 130236363 130250353 - MGP_WSBEiJ_P0066851 Lck protein_coding protein_coding MGP_WSBEiJ_T0066852.1 MGP_WSBEiJ_G0028037.1 mouse_genomes_project 4 130236909 130247818 - Lck protein_coding retained_intron MGP_WSBEiJ_T0066853.1 MGP_WSBEiJ_G0028037.1 mouse_genomes_project 4 130240002 130248201 - Lck protein_coding retained_intron MGP_WSBEiJ_T0066854.1 MGP_WSBEiJ_G0028037.1 mouse_genomes_project 4 130247445 130248431 - Lck protein_coding retained_intron MGP_WSBEiJ_T0066855.1 MGP_WSBEiJ_G0028037.1 mouse_genomes_project 4 130248824 130250049 - Lck protein_coding retained_intron MGP_WSBEiJ_T0066856.1 MGP_WSBEiJ_G0028037.1 mouse_genomes_project 4 130249326 130250334 - MGP_WSBEiJ_P0066856 Lck protein_coding protein_coding MGP_WSBEiJ_T0067673.1 MGP_WSBEiJ_G0028210.1 mouse_genomes_project 4 140130704 140136991 + MGP_WSBEiJ_P0067673 Pla2g2d protein_coding protein_coding MGP_WSBEiJ_T0067674.1 MGP_WSBEiJ_G0028210.1 mouse_genomes_project 4 140132862 140136095 + MGP_WSBEiJ_P0067674 Pla2g2d protein_coding protein_coding MGP_WSBEiJ_T0007780.1 MGP_WSBEiJ_G0006366.1 mouse_genomes_project 4 99072317 99075833 + Gm12690 lincRNA lincRNA MGP_WSBEiJ_T0098252.1 MGP_WSBEiJ_G0036915.1 mouse_genomes_project 4 43347923 43348030 + Gm22055 snRNA snRNA MGP_WSBEiJ_T0068491.1 MGP_WSBEiJ_G0028396.1 mouse_genomes_project 4 157411852 157415385 - Fam213b protein_coding processed_transcript MGP_WSBEiJ_T0068492.1 MGP_WSBEiJ_G0028396.1 mouse_genomes_project 4 157412747 157415457 - MGP_WSBEiJ_P0068492 Fam213b protein_coding protein_coding MGP_WSBEiJ_T0068493.1 MGP_WSBEiJ_G0028396.1 mouse_genomes_project 4 157413683 157415482 - MGP_WSBEiJ_P0068493 Fam213b protein_coding protein_coding MGP_WSBEiJ_T0007887.1 MGP_WSBEiJ_G0006444.1 mouse_genomes_project 4 142416696 142422063 + 4930515B02Rik lincRNA lincRNA MGP_WSBEiJ_T0064050.1 MGP_WSBEiJ_G0027400.1 mouse_genomes_project 4 39265925 39273724 - MGP_WSBEiJ_P0064050 Arid3c protein_coding protein_coding MGP_WSBEiJ_T0064051.1 MGP_WSBEiJ_G0027400.1 mouse_genomes_project 4 39266228 39272371 - MGP_WSBEiJ_P0064051 Arid3c protein_coding protein_coding MGP_WSBEiJ_T0064052.1 MGP_WSBEiJ_G0027400.1 mouse_genomes_project 4 39266228 39272371 - MGP_WSBEiJ_P0064052 Arid3c protein_coding protein_coding MGP_WSBEiJ_T0064053.1 MGP_WSBEiJ_G0027400.1 mouse_genomes_project 4 39272010 39273724 - MGP_WSBEiJ_P0064053 Arid3c protein_coding protein_coding MGP_WSBEiJ_T0001392.1 MGP_WSBEiJ_G0001320.1 mouse_genomes_project 4 146756063 146757757 - TEC TEC MGP_WSBEiJ_T0014183.1 MGP_WSBEiJ_G0012313.1 mouse_genomes_project 4 71622205 71622803 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065815.1 MGP_WSBEiJ_G0027791.1 mouse_genomes_project 4 111359024 111404335 + MGP_WSBEiJ_P0065815 Bend5 protein_coding protein_coding MGP_WSBEiJ_T0065816.1 MGP_WSBEiJ_G0027791.1 mouse_genomes_project 4 111359065 111378822 + Bend5 protein_coding processed_transcript MGP_WSBEiJ_T0065817.1 MGP_WSBEiJ_G0027791.1 mouse_genomes_project 4 111359106 111403956 + Bend5 protein_coding processed_transcript MGP_WSBEiJ_T0065818.1 MGP_WSBEiJ_G0027791.1 mouse_genomes_project 4 111359225 111364558 + Bend5 protein_coding processed_transcript MGP_WSBEiJ_T0065819.1 MGP_WSBEiJ_G0027791.1 mouse_genomes_project 4 111378772 111404333 + MGP_WSBEiJ_P0065819 Bend5 protein_coding protein_coding MGP_WSBEiJ_T0065820.1 MGP_WSBEiJ_G0027791.1 mouse_genomes_project 4 111378894 111403963 + Bend5 protein_coding processed_transcript MGP_WSBEiJ_T0068462.1 MGP_WSBEiJ_G0028390.1 mouse_genomes_project 4 156765220 156769230 - Arhgef16 protein_coding retained_intron MGP_WSBEiJ_T0068463.1 MGP_WSBEiJ_G0028390.1 mouse_genomes_project 4 156765220 156789181 - Arhgef16 protein_coding retained_intron MGP_WSBEiJ_T0068464.1 MGP_WSBEiJ_G0028390.1 mouse_genomes_project 4 156765220 156789343 - MGP_WSBEiJ_P0068464 Arhgef16 protein_coding protein_coding MGP_WSBEiJ_T0068465.1 MGP_WSBEiJ_G0028390.1 mouse_genomes_project 4 156765484 156790950 - MGP_WSBEiJ_P0068465 Arhgef16 protein_coding protein_coding MGP_WSBEiJ_T0068466.1 MGP_WSBEiJ_G0028390.1 mouse_genomes_project 4 156775407 156789181 - MGP_WSBEiJ_P0068466 Arhgef16 protein_coding protein_coding MGP_WSBEiJ_T0068467.1 MGP_WSBEiJ_G0028390.1 mouse_genomes_project 4 156780332 156790963 - MGP_WSBEiJ_P0068467 Arhgef16 protein_coding protein_coding MGP_WSBEiJ_T0066529.1 MGP_WSBEiJ_G0027962.1 mouse_genomes_project 4 125094906 125157588 + MGP_WSBEiJ_P0066529 Inpp5b protein_coding protein_coding MGP_WSBEiJ_T0066530.1 MGP_WSBEiJ_G0027962.1 mouse_genomes_project 4 125094914 125105324 + MGP_WSBEiJ_P0066530 Inpp5b protein_coding protein_coding MGP_WSBEiJ_T0066531.1 MGP_WSBEiJ_G0027962.1 mouse_genomes_project 4 125094928 125157582 + MGP_WSBEiJ_P0066531 Inpp5b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066532.1 MGP_WSBEiJ_G0027962.1 mouse_genomes_project 4 125094934 125105286 + MGP_WSBEiJ_P0066532 Inpp5b protein_coding protein_coding MGP_WSBEiJ_T0066533.1 MGP_WSBEiJ_G0027962.1 mouse_genomes_project 4 125122910 125136141 + Inpp5b protein_coding processed_transcript MGP_WSBEiJ_T0066534.1 MGP_WSBEiJ_G0027962.1 mouse_genomes_project 4 125123017 125136194 + Inpp5b protein_coding processed_transcript MGP_WSBEiJ_T0066535.1 MGP_WSBEiJ_G0027962.1 mouse_genomes_project 4 125150220 125152929 + Inpp5b protein_coding processed_transcript MGP_WSBEiJ_T0066536.1 MGP_WSBEiJ_G0027962.1 mouse_genomes_project 4 125154585 125157187 + Inpp5b protein_coding processed_transcript MGP_WSBEiJ_T0007702.1 MGP_WSBEiJ_G0006299.1 mouse_genomes_project 4 27556559 27646635 + Gm11924 lincRNA lincRNA MGP_WSBEiJ_T0065137.1 MGP_WSBEiJ_G0027641.1 mouse_genomes_project 4 87913091 87916318 - MGP_WSBEiJ_P0065137 protein_coding protein_coding MGP_WSBEiJ_T0098281.1 MGP_WSBEiJ_G0036944.1 mouse_genomes_project 4 108860204 108860309 - Gm23589 snRNA snRNA MGP_WSBEiJ_T0099503.1 MGP_WSBEiJ_G0038166.1 mouse_genomes_project 4 22395069 22395194 - Gm25975 snoRNA snoRNA MGP_WSBEiJ_T0004532.1 MGP_WSBEiJ_G0003930.1 mouse_genomes_project 4 157148907 157156044 + Gm13111 antisense antisense MGP_WSBEiJ_T0068017.1 MGP_WSBEiJ_G0028310.1 mouse_genomes_project 4 150051885 150068956 + MGP_WSBEiJ_P0068017 protein_coding protein_coding MGP_WSBEiJ_T0068018.1 MGP_WSBEiJ_G0028310.1 mouse_genomes_project 4 150051968 150057374 + MGP_WSBEiJ_P0068018 protein_coding protein_coding MGP_WSBEiJ_T0068019.1 MGP_WSBEiJ_G0028310.1 mouse_genomes_project 4 150053616 150056266 + protein_coding retained_intron MGP_WSBEiJ_T0068020.1 MGP_WSBEiJ_G0028310.1 mouse_genomes_project 4 150054000 150072300 + MGP_WSBEiJ_P0068020 protein_coding protein_coding MGP_WSBEiJ_T0068021.1 MGP_WSBEiJ_G0028310.1 mouse_genomes_project 4 150054096 150072300 + MGP_WSBEiJ_P0068021 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068022.1 MGP_WSBEiJ_G0028310.1 mouse_genomes_project 4 150054411 150056774 + protein_coding retained_intron MGP_WSBEiJ_T0068023.1 MGP_WSBEiJ_G0028310.1 mouse_genomes_project 4 150065450 150072297 + MGP_WSBEiJ_P0068023 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098290.1 MGP_WSBEiJ_G0036953.1 mouse_genomes_project 4 121055013 121055117 + Gm24678 snRNA snRNA MGP_WSBEiJ_T0014153.1 MGP_WSBEiJ_G0012283.1 mouse_genomes_project 4 54617836 54618615 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067963.1 MGP_WSBEiJ_G0028294.1 mouse_genomes_project 4 146515663 146536658 - MGP_WSBEiJ_P0067963 Gm13178 protein_coding protein_coding MGP_WSBEiJ_T0098251.1 MGP_WSBEiJ_G0036914.1 mouse_genomes_project 4 41771743 41771855 - Gm22706 snRNA snRNA MGP_WSBEiJ_T0066453.1 MGP_WSBEiJ_G0027939.1 mouse_genomes_project 4 123225803 123226891 + MGP_WSBEiJ_P0066453 Mycl protein_coding protein_coding MGP_WSBEiJ_T0066454.1 MGP_WSBEiJ_G0027939.1 mouse_genomes_project 4 123226095 123232670 + MGP_WSBEiJ_P0066454 Mycl protein_coding protein_coding MGP_WSBEiJ_T0066455.1 MGP_WSBEiJ_G0027939.1 mouse_genomes_project 4 123226250 123232670 + MGP_WSBEiJ_P0066455 Mycl protein_coding protein_coding MGP_WSBEiJ_T0066456.1 MGP_WSBEiJ_G0027939.1 mouse_genomes_project 4 123229063 123230651 + Mycl protein_coding processed_transcript MGP_WSBEiJ_T0066457.1 MGP_WSBEiJ_G0027939.1 mouse_genomes_project 4 123229522 123230701 + Mycl protein_coding processed_transcript MGP_WSBEiJ_T0014055.1 MGP_WSBEiJ_G0012185.1 mouse_genomes_project 4 22420053 22423760 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014245.1 MGP_WSBEiJ_G0012375.1 mouse_genomes_project 4 94392686 94393150 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066365.1 MGP_WSBEiJ_G0027913.1 mouse_genomes_project 4 119720120 119723811 - MGP_WSBEiJ_P0066365 Guca2b protein_coding protein_coding MGP_WSBEiJ_T0066366.1 MGP_WSBEiJ_G0027913.1 mouse_genomes_project 4 119720120 119723984 - MGP_WSBEiJ_P0066366 Guca2b protein_coding protein_coding MGP_WSBEiJ_T0068455.1 MGP_WSBEiJ_G0028389.1 mouse_genomes_project 4 156651104 156762452 + MGP_WSBEiJ_P0068455 Megf6 protein_coding protein_coding MGP_WSBEiJ_T0068456.1 MGP_WSBEiJ_G0028389.1 mouse_genomes_project 4 156723071 156758478 + MGP_WSBEiJ_P0068456 Megf6 protein_coding protein_coding MGP_WSBEiJ_T0068457.1 MGP_WSBEiJ_G0028389.1 mouse_genomes_project 4 156734854 156737768 + Megf6 protein_coding retained_intron MGP_WSBEiJ_T0068458.1 MGP_WSBEiJ_G0028389.1 mouse_genomes_project 4 156751356 156761923 + Megf6 protein_coding processed_transcript MGP_WSBEiJ_T0068459.1 MGP_WSBEiJ_G0028389.1 mouse_genomes_project 4 156752912 156757272 + MGP_WSBEiJ_P0068459 Megf6 protein_coding protein_coding MGP_WSBEiJ_T0068460.1 MGP_WSBEiJ_G0028389.1 mouse_genomes_project 4 156756527 156760867 + Megf6 protein_coding retained_intron MGP_WSBEiJ_T0068461.1 MGP_WSBEiJ_G0028389.1 mouse_genomes_project 4 156756622 156757778 + Megf6 protein_coding retained_intron MGP_WSBEiJ_T0014006.1 MGP_WSBEiJ_G0012136.1 mouse_genomes_project 4 6609455 6610118 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066843.1 MGP_WSBEiJ_G0028036.1 mouse_genomes_project 4 130202057 130230178 - MGP_WSBEiJ_P0066843 protein_coding protein_coding MGP_WSBEiJ_T0066844.1 MGP_WSBEiJ_G0028036.1 mouse_genomes_project 4 130203650 130208012 - protein_coding retained_intron MGP_WSBEiJ_T0066845.1 MGP_WSBEiJ_G0028036.1 mouse_genomes_project 4 130207712 130213764 - protein_coding retained_intron MGP_WSBEiJ_T0066846.1 MGP_WSBEiJ_G0028036.1 mouse_genomes_project 4 130207859 130209793 - protein_coding retained_intron MGP_WSBEiJ_T0066847.1 MGP_WSBEiJ_G0028036.1 mouse_genomes_project 4 130208047 130209751 - protein_coding retained_intron MGP_WSBEiJ_T0066848.1 MGP_WSBEiJ_G0028036.1 mouse_genomes_project 4 130212615 130230156 - protein_coding retained_intron MGP_WSBEiJ_T0068123.1 MGP_WSBEiJ_G0028331.1 mouse_genomes_project 4 151258607 151275314 - MGP_WSBEiJ_P0068123 Pgd protein_coding protein_coding MGP_WSBEiJ_T0068124.1 MGP_WSBEiJ_G0028331.1 mouse_genomes_project 4 151263799 151268607 - Pgd protein_coding retained_intron MGP_WSBEiJ_T0068125.1 MGP_WSBEiJ_G0028331.1 mouse_genomes_project 4 151268534 151275378 - Pgd protein_coding retained_intron MGP_WSBEiJ_T0068126.1 MGP_WSBEiJ_G0028331.1 mouse_genomes_project 4 151268900 151270262 - Pgd protein_coding retained_intron MGP_WSBEiJ_T0068127.1 MGP_WSBEiJ_G0028331.1 mouse_genomes_project 4 151269991 151275267 - Pgd protein_coding retained_intron MGP_WSBEiJ_T0004346.1 MGP_WSBEiJ_G0003788.1 mouse_genomes_project 4 8310337 8315063 - Gm11832 antisense antisense MGP_WSBEiJ_T0063703.1 MGP_WSBEiJ_G0027317.1 mouse_genomes_project 4 16860062 16874437 + MGP_WSBEiJ_P0063703 Ttpa protein_coding protein_coding MGP_WSBEiJ_T0063704.1 MGP_WSBEiJ_G0027317.1 mouse_genomes_project 4 16860567 16881815 + MGP_WSBEiJ_P0063704 Ttpa protein_coding protein_coding MGP_WSBEiJ_T0014081.1 MGP_WSBEiJ_G0012211.1 mouse_genomes_project 4 29826503 29826663 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014404.1 MGP_WSBEiJ_G0012534.1 mouse_genomes_project 4 155059770 155060026 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014134.1 MGP_WSBEiJ_G0012264.1 mouse_genomes_project 4 50332822 50334848 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066297.1 MGP_WSBEiJ_G0027900.1 mouse_genomes_project 4 119242319 119274008 - AU022252 protein_coding processed_transcript MGP_WSBEiJ_T0066299.1 MGP_WSBEiJ_G0027900.1 mouse_genomes_project 4 119258593 119274012 - MGP_WSBEiJ_P0066299 AU022252 protein_coding protein_coding MGP_WSBEiJ_T0066300.1 MGP_WSBEiJ_G0027900.1 mouse_genomes_project 4 119267697 119273978 - AU022252 protein_coding processed_transcript MGP_WSBEiJ_T0066301.1 MGP_WSBEiJ_G0027900.1 mouse_genomes_project 4 119267787 119273985 - AU022252 protein_coding processed_transcript MGP_WSBEiJ_T0066237.1 MGP_WSBEiJ_G0027877.1 mouse_genomes_project 4 118419975 118426942 - MGP_WSBEiJ_P0066237 Cdc20 protein_coding unknown_likely_coding MGP_WSBEiJ_T0066238.1 MGP_WSBEiJ_G0027877.1 mouse_genomes_project 4 118419981 118427173 - MGP_WSBEiJ_P0066238 Cdc20 protein_coding protein_coding MGP_WSBEiJ_T0066239.1 MGP_WSBEiJ_G0027877.1 mouse_genomes_project 4 118420185 118426399 - MGP_WSBEiJ_P0066239 Cdc20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066240.1 MGP_WSBEiJ_G0027877.1 mouse_genomes_project 4 118420628 118425642 - Cdc20 protein_coding retained_intron MGP_WSBEiJ_T0067716.1 MGP_WSBEiJ_G0028222.1 mouse_genomes_project 4 140702983 140709506 + MGP_WSBEiJ_P0067716 Akr7a5 protein_coding protein_coding MGP_WSBEiJ_T0067717.1 MGP_WSBEiJ_G0028222.1 mouse_genomes_project 4 140707661 140708490 + Akr7a5 protein_coding processed_transcript MGP_WSBEiJ_T0065462.1 MGP_WSBEiJ_G0027724.1 mouse_genomes_project 4 104528849 104530448 + MGP_WSBEiJ_P0065462 Gm17662 protein_coding protein_coding MGP_WSBEiJ_T0010461.1 MGP_WSBEiJ_G0008618.1 mouse_genomes_project 4 134226759 134226848 + Mir5122 miRNA miRNA MGP_WSBEiJ_T0067513.1 MGP_WSBEiJ_G0028172.1 mouse_genomes_project 4 137414418 137464488 + MGP_WSBEiJ_P0067513 Hnrnpr protein_coding protein_coding MGP_WSBEiJ_T0067514.1 MGP_WSBEiJ_G0028172.1 mouse_genomes_project 4 137414478 137433866 + MGP_WSBEiJ_P0067514 Hnrnpr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067515.1 MGP_WSBEiJ_G0028172.1 mouse_genomes_project 4 137414985 137431660 + MGP_WSBEiJ_P0067515 Hnrnpr protein_coding protein_coding MGP_WSBEiJ_T0067516.1 MGP_WSBEiJ_G0028172.1 mouse_genomes_project 4 137415041 137433894 + MGP_WSBEiJ_P0067516 Hnrnpr protein_coding protein_coding MGP_WSBEiJ_T0067517.1 MGP_WSBEiJ_G0028172.1 mouse_genomes_project 4 137415135 137419876 + MGP_WSBEiJ_P0067517 Hnrnpr protein_coding protein_coding MGP_WSBEiJ_T0067518.1 MGP_WSBEiJ_G0028172.1 mouse_genomes_project 4 137440389 137443590 + Hnrnpr protein_coding retained_intron MGP_WSBEiJ_T0067519.1 MGP_WSBEiJ_G0028172.1 mouse_genomes_project 4 137443335 137447388 + Hnrnpr protein_coding retained_intron MGP_WSBEiJ_T0067520.1 MGP_WSBEiJ_G0028172.1 mouse_genomes_project 4 137460829 137463090 + Hnrnpr protein_coding processed_transcript MGP_WSBEiJ_T0010433.1 MGP_WSBEiJ_G0008590.1 mouse_genomes_project 4 90702692 90702772 - Mir6402 miRNA miRNA MGP_WSBEiJ_T0063708.1 MGP_WSBEiJ_G0027320.1 mouse_genomes_project 4 18504325 18512805 - Prdm13 protein_coding processed_transcript MGP_WSBEiJ_T0063709.1 MGP_WSBEiJ_G0027320.1 mouse_genomes_project 4 18504326 18512805 - MGP_WSBEiJ_P0063709 Prdm13 protein_coding protein_coding MGP_WSBEiJ_T0063710.1 MGP_WSBEiJ_G0027320.1 mouse_genomes_project 4 18504326 18512625 - MGP_WSBEiJ_P0063710 Prdm13 protein_coding protein_coding MGP_WSBEiJ_T0063711.1 MGP_WSBEiJ_G0027320.1 mouse_genomes_project 4 18506510 18512625 - Prdm13 protein_coding processed_transcript MGP_WSBEiJ_T0063712.1 MGP_WSBEiJ_G0027320.1 mouse_genomes_project 4 18506592 18512623 - Prdm13 protein_coding processed_transcript MGP_WSBEiJ_T0063713.1 MGP_WSBEiJ_G0027320.1 mouse_genomes_project 4 18509142 18512687 - Prdm13 protein_coding retained_intron MGP_WSBEiJ_T0014372.1 MGP_WSBEiJ_G0012502.1 mouse_genomes_project 4 137074721 137075147 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099504.1 MGP_WSBEiJ_G0038167.1 mouse_genomes_project 4 25415122 25415251 + Gm25378 snoRNA snoRNA MGP_WSBEiJ_T0014293.1 MGP_WSBEiJ_G0012423.1 mouse_genomes_project 4 110417943 110418211 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067435.1 MGP_WSBEiJ_G0028152.1 mouse_genomes_project 4 136537297 136580939 + MGP_WSBEiJ_P0067435 Stpg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067436.1 MGP_WSBEiJ_G0028152.1 mouse_genomes_project 4 136537370 136562766 + Stpg1 protein_coding processed_transcript MGP_WSBEiJ_T0067437.1 MGP_WSBEiJ_G0028152.1 mouse_genomes_project 4 136538554 136577222 + Stpg1 protein_coding processed_transcript MGP_WSBEiJ_T0065555.1 MGP_WSBEiJ_G0027746.1 mouse_genomes_project 4 106951142 106974961 + MGP_WSBEiJ_P0065555 Tmem59 protein_coding protein_coding MGP_WSBEiJ_T0065556.1 MGP_WSBEiJ_G0027746.1 mouse_genomes_project 4 106951270 106964601 + MGP_WSBEiJ_P0065556 Tmem59 protein_coding protein_coding MGP_WSBEiJ_T0065557.1 MGP_WSBEiJ_G0027746.1 mouse_genomes_project 4 106951270 106974663 + MGP_WSBEiJ_P0065557 Tmem59 protein_coding protein_coding MGP_WSBEiJ_T0065558.1 MGP_WSBEiJ_G0027746.1 mouse_genomes_project 4 106951410 106964804 + Tmem59 protein_coding retained_intron MGP_WSBEiJ_T0065559.1 MGP_WSBEiJ_G0027746.1 mouse_genomes_project 4 106951469 106974471 + MGP_WSBEiJ_P0065559 Tmem59 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065560.1 MGP_WSBEiJ_G0027746.1 mouse_genomes_project 4 106951761 106974959 + Tmem59 protein_coding processed_transcript MGP_WSBEiJ_T0014226.1 MGP_WSBEiJ_G0012356.1 mouse_genomes_project 4 87836989 87837758 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011355.1 MGP_WSBEiJ_G0009512.1 mouse_genomes_project 4 8638829 8639145 + Gm22477 misc_RNA misc_RNA MGP_WSBEiJ_T0068102.1 MGP_WSBEiJ_G0028325.1 mouse_genomes_project 4 150712178 150740474 + MGP_WSBEiJ_P0068102 Gm572 protein_coding protein_coding MGP_WSBEiJ_T0011372.1 MGP_WSBEiJ_G0009529.1 mouse_genomes_project 4 85024365 85024642 + Gm26069 misc_RNA misc_RNA MGP_WSBEiJ_T0004496.1 MGP_WSBEiJ_G0003903.1 mouse_genomes_project 4 143482603 143494356 + Fhad1os2 antisense antisense MGP_WSBEiJ_T0004473.1 MGP_WSBEiJ_G0003884.1 mouse_genomes_project 4 135411493 135414165 - antisense antisense MGP_WSBEiJ_T0068377.1 MGP_WSBEiJ_G0028376.1 mouse_genomes_project 4 154697982 154749320 + MGP_WSBEiJ_P0068377 Chd5 protein_coding protein_coding MGP_WSBEiJ_T0068378.1 MGP_WSBEiJ_G0028376.1 mouse_genomes_project 4 154697982 154749320 + MGP_WSBEiJ_P0068378 Chd5 protein_coding protein_coding MGP_WSBEiJ_T0068379.1 MGP_WSBEiJ_G0028376.1 mouse_genomes_project 4 154698218 154749307 + MGP_WSBEiJ_P0068379 Chd5 protein_coding protein_coding MGP_WSBEiJ_T0068380.1 MGP_WSBEiJ_G0028376.1 mouse_genomes_project 4 154700927 154712962 + Chd5 protein_coding processed_transcript MGP_WSBEiJ_T0068381.1 MGP_WSBEiJ_G0028376.1 mouse_genomes_project 4 154731355 154749307 + Chd5 protein_coding processed_transcript MGP_WSBEiJ_T0098265.1 MGP_WSBEiJ_G0036928.1 mouse_genomes_project 4 85623483 85623557 + Gm26017 snRNA snRNA MGP_WSBEiJ_T0014321.1 MGP_WSBEiJ_G0012451.1 mouse_genomes_project 4 119581303 119582259 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014207.1 MGP_WSBEiJ_G0012337.1 mouse_genomes_project 4 78951036 78951549 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065730.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108862257 108925022 + MGP_WSBEiJ_P0065730 Nrd1 protein_coding protein_coding MGP_WSBEiJ_T0065731.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108862257 108925022 + MGP_WSBEiJ_P0065731 Nrd1 protein_coding protein_coding MGP_WSBEiJ_T0065732.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108862372 108924406 + MGP_WSBEiJ_P0065732 Nrd1 protein_coding protein_coding MGP_WSBEiJ_T0065733.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108880617 108907940 + MGP_WSBEiJ_P0065733 Nrd1 protein_coding protein_coding MGP_WSBEiJ_T0065734.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108887812 108896217 + Nrd1 protein_coding retained_intron MGP_WSBEiJ_T0065735.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108895911 108906701 + Nrd1 protein_coding retained_intron MGP_WSBEiJ_T0065736.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108903034 108907402 + Nrd1 protein_coding retained_intron MGP_WSBEiJ_T0065737.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108903479 108924720 + Nrd1 protein_coding processed_transcript MGP_WSBEiJ_T0065738.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108909586 108914175 + Nrd1 protein_coding processed_transcript MGP_WSBEiJ_T0065739.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108918193 108920116 + Nrd1 protein_coding retained_intron MGP_WSBEiJ_T0065740.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108922178 108923045 + Nrd1 protein_coding retained_intron MGP_WSBEiJ_T0065741.1 MGP_WSBEiJ_G0027779.1 mouse_genomes_project 4 108922235 108923925 + Nrd1 protein_coding retained_intron MGP_WSBEiJ_T0098263.1 MGP_WSBEiJ_G0036926.1 mouse_genomes_project 4 82546547 82546688 - Gm25899 snRNA snRNA MGP_WSBEiJ_T0098270.1 MGP_WSBEiJ_G0036933.1 mouse_genomes_project 4 96272848 96272912 + Gm27521 snRNA snRNA MGP_WSBEiJ_T0017470.1 MGP_WSBEiJ_G0014976.1 mouse_genomes_project 4 88664182 88682503 + Gm12609 processed_transcript processed_transcript MGP_WSBEiJ_T0014161.1 MGP_WSBEiJ_G0012291.1 mouse_genomes_project 4 60326060 60327210 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004539.1 MGP_WSBEiJ_G0003935.1 mouse_genomes_project 4 158345827 158358699 + Atad3aos antisense antisense MGP_WSBEiJ_T0004540.1 MGP_WSBEiJ_G0003935.1 mouse_genomes_project 4 158345841 158346923 + Atad3aos antisense antisense MGP_WSBEiJ_T0004541.1 MGP_WSBEiJ_G0003935.1 mouse_genomes_project 4 158345859 158348212 + Atad3aos antisense antisense MGP_WSBEiJ_T0004542.1 MGP_WSBEiJ_G0003935.1 mouse_genomes_project 4 158345870 158348223 + Atad3aos antisense antisense MGP_WSBEiJ_T0067372.1 MGP_WSBEiJ_G0028141.1 mouse_genomes_project 4 135794620 135803065 - Tmem57 protein_coding processed_transcript MGP_WSBEiJ_T0067373.1 MGP_WSBEiJ_G0028141.1 mouse_genomes_project 4 135794620 135848868 - MGP_WSBEiJ_P0067373 Tmem57 protein_coding protein_coding MGP_WSBEiJ_T0067374.1 MGP_WSBEiJ_G0028141.1 mouse_genomes_project 4 135803045 135848672 - MGP_WSBEiJ_P0067374 Tmem57 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067375.1 MGP_WSBEiJ_G0028141.1 mouse_genomes_project 4 135820241 135848786 - MGP_WSBEiJ_P0067375 Tmem57 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067376.1 MGP_WSBEiJ_G0028141.1 mouse_genomes_project 4 135829542 135848840 - Tmem57 protein_coding retained_intron MGP_WSBEiJ_T0007720.1 MGP_WSBEiJ_G0006316.1 mouse_genomes_project 4 45931300 45933105 + Gm12434 lincRNA lincRNA MGP_WSBEiJ_T0014365.1 MGP_WSBEiJ_G0012495.1 mouse_genomes_project 4 136323362 136323672 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064962.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80265583 80428980 - MGP_WSBEiJ_P0064962 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064963.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80265588 80428982 - MGP_WSBEiJ_P0064963 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064964.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80265588 80323878 - MGP_WSBEiJ_P0064964 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064965.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80265599 80429066 - MGP_WSBEiJ_P0064965 Mpdz protein_coding unknown_likely_coding MGP_WSBEiJ_T0064966.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80266318 80272605 - Mpdz protein_coding retained_intron MGP_WSBEiJ_T0064967.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80266421 80282679 - MGP_WSBEiJ_P0064967 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064968.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80270056 80271766 - Mpdz protein_coding retained_intron MGP_WSBEiJ_T0064969.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80270440 80279707 - MGP_WSBEiJ_P0064969 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064970.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80271643 80275148 - Mpdz protein_coding retained_intron MGP_WSBEiJ_T0064971.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80276964 80279924 - Mpdz protein_coding retained_intron MGP_WSBEiJ_T0064972.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80279653 80280269 - Mpdz protein_coding retained_intron MGP_WSBEiJ_T0064973.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80294792 80308516 - MGP_WSBEiJ_P0064973 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064974.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80308338 80321047 - MGP_WSBEiJ_P0064974 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064975.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80308360 80323836 - MGP_WSBEiJ_P0064975 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064976.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80336176 80353411 - MGP_WSBEiJ_P0064976 Mpdz protein_coding protein_coding MGP_WSBEiJ_T0064977.1 MGP_WSBEiJ_G0027610.1 mouse_genomes_project 4 80399908 80428990 - Mpdz protein_coding retained_intron MGP_WSBEiJ_T0014208.1 MGP_WSBEiJ_G0012338.1 mouse_genomes_project 4 78951973 78953116 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014299.1 MGP_WSBEiJ_G0012429.1 mouse_genomes_project 4 114933274 114959051 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004354.1 MGP_WSBEiJ_G0003794.1 mouse_genomes_project 4 21656256 21663929 + Gm11899 antisense antisense MGP_WSBEiJ_T0066517.1 MGP_WSBEiJ_G0027956.1 mouse_genomes_project 4 124219216 124219735 - MGP_WSBEiJ_P0066517 4930535I16Rik protein_coding protein_coding MGP_WSBEiJ_T0065561.1 MGP_WSBEiJ_G0027747.1 mouse_genomes_project 4 106983148 106992786 + MGP_WSBEiJ_P0065561 Ldlrad1 protein_coding protein_coding MGP_WSBEiJ_T0064472.1 MGP_WSBEiJ_G0027477.1 mouse_genomes_project 4 44354419 44400490 - MGP_WSBEiJ_P0064472 Trim14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064473.1 MGP_WSBEiJ_G0027477.1 mouse_genomes_project 4 44355457 44398782 - Trim14 protein_coding processed_transcript MGP_WSBEiJ_T0064474.1 MGP_WSBEiJ_G0027477.1 mouse_genomes_project 4 44367484 44400509 - MGP_WSBEiJ_P0064474 Trim14 protein_coding protein_coding MGP_WSBEiJ_T0064475.1 MGP_WSBEiJ_G0027477.1 mouse_genomes_project 4 44369724 44398810 - Trim14 protein_coding processed_transcript MGP_WSBEiJ_T0064476.1 MGP_WSBEiJ_G0027477.1 mouse_genomes_project 4 44374122 44400482 - MGP_WSBEiJ_P0064476 Trim14 protein_coding protein_coding MGP_WSBEiJ_T0064477.1 MGP_WSBEiJ_G0027477.1 mouse_genomes_project 4 44386290 44398972 - Trim14 protein_coding processed_transcript MGP_WSBEiJ_T0007766.1 MGP_WSBEiJ_G0006354.1 mouse_genomes_project 4 88344213 88381462 + Gm12603 lincRNA lincRNA MGP_WSBEiJ_T0007767.1 MGP_WSBEiJ_G0006354.1 mouse_genomes_project 4 88353707 88381565 + Gm12603 lincRNA lincRNA MGP_WSBEiJ_T0065807.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 110299130 110894613 + MGP_WSBEiJ_P0065807 Agbl4 protein_coding protein_coding MGP_WSBEiJ_T0065808.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 110299167 110578743 + MGP_WSBEiJ_P0065808 Agbl4 protein_coding protein_coding MGP_WSBEiJ_T0065809.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 110299167 111511746 + MGP_WSBEiJ_P0065809 Agbl4 protein_coding protein_coding MGP_WSBEiJ_T0065810.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 110299167 111612844 + MGP_WSBEiJ_P0065810 Agbl4 protein_coding protein_coding MGP_WSBEiJ_T0065811.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 110299260 111606030 + MGP_WSBEiJ_P0065811 Agbl4 protein_coding protein_coding MGP_WSBEiJ_T0065812.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 110299260 111606030 + MGP_WSBEiJ_P0065812 Agbl4 protein_coding protein_coding MGP_WSBEiJ_T0065813.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 111070156 111196999 + Agbl4 protein_coding processed_transcript MGP_WSBEiJ_T0065814.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 111070226 111569327 + MGP_WSBEiJ_P0065814 Agbl4 protein_coding protein_coding MGP_WSBEiJ_T0065821.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 111511430 111605089 + Agbl4 protein_coding processed_transcript MGP_WSBEiJ_T0065822.1 MGP_WSBEiJ_G0027790.1 mouse_genomes_project 4 111511460 111606027 + Agbl4 protein_coding processed_transcript MGP_WSBEiJ_T0067860.1 MGP_WSBEiJ_G0028257.1 mouse_genomes_project 4 143042076 143122800 - MGP_WSBEiJ_P0067860 Spen protein_coding protein_coding MGP_WSBEiJ_T0067861.1 MGP_WSBEiJ_G0028257.1 mouse_genomes_project 4 143042076 143122652 - MGP_WSBEiJ_P0067861 Spen protein_coding protein_coding MGP_WSBEiJ_T0067862.1 MGP_WSBEiJ_G0028257.1 mouse_genomes_project 4 143042638 143045667 - Spen protein_coding processed_transcript MGP_WSBEiJ_T0067863.1 MGP_WSBEiJ_G0028257.1 mouse_genomes_project 4 143059512 143063224 - Spen protein_coding processed_transcript MGP_WSBEiJ_T0067864.1 MGP_WSBEiJ_G0028257.1 mouse_genomes_project 4 143070459 143094372 - Spen protein_coding processed_transcript MGP_WSBEiJ_T0067865.1 MGP_WSBEiJ_G0028257.1 mouse_genomes_project 4 143100479 143122456 - Spen protein_coding processed_transcript MGP_WSBEiJ_T0014039.1 MGP_WSBEiJ_G0012169.1 mouse_genomes_project 4 17250041 17251345 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067947.1 MGP_WSBEiJ_G0028281.1 mouse_genomes_project 4 145375434 145379425 - MGP_WSBEiJ_P0067947 Gm13088 protein_coding protein_coding MGP_WSBEiJ_T0065151.1 MGP_WSBEiJ_G0027654.1 mouse_genomes_project 4 88614939 88619691 - MGP_WSBEiJ_P0065151 Cdkn2b protein_coding protein_coding MGP_WSBEiJ_T0010443.1 MGP_WSBEiJ_G0008600.1 mouse_genomes_project 4 118175977 118176037 - Mir7226 miRNA miRNA MGP_WSBEiJ_T0066442.1 MGP_WSBEiJ_G0027937.1 mouse_genomes_project 4 123083784 123112181 - MGP_WSBEiJ_P0066442 Cap1 protein_coding protein_coding MGP_WSBEiJ_T0066443.1 MGP_WSBEiJ_G0027937.1 mouse_genomes_project 4 123083784 123112314 - MGP_WSBEiJ_P0066443 Cap1 protein_coding protein_coding MGP_WSBEiJ_T0066444.1 MGP_WSBEiJ_G0027937.1 mouse_genomes_project 4 123083784 123112326 - MGP_WSBEiJ_P0066444 Cap1 protein_coding protein_coding MGP_WSBEiJ_T0066445.1 MGP_WSBEiJ_G0027937.1 mouse_genomes_project 4 123088240 123090455 - Cap1 protein_coding processed_transcript MGP_WSBEiJ_T0066446.1 MGP_WSBEiJ_G0027937.1 mouse_genomes_project 4 123093152 123112235 - MGP_WSBEiJ_P0066446 Cap1 protein_coding protein_coding MGP_WSBEiJ_T0066447.1 MGP_WSBEiJ_G0027937.1 mouse_genomes_project 4 123096500 123112130 - Cap1 protein_coding processed_transcript MGP_WSBEiJ_T0066448.1 MGP_WSBEiJ_G0027937.1 mouse_genomes_project 4 123097591 123112134 - Cap1 protein_coding processed_transcript MGP_WSBEiJ_T0007836.1 MGP_WSBEiJ_G0006405.1 mouse_genomes_project 4 128378955 128380492 - 1700112K13Rik lincRNA lincRNA MGP_WSBEiJ_T0014184.1 MGP_WSBEiJ_G0012314.1 mouse_genomes_project 4 71763775 71769726 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097395.1 MGP_WSBEiJ_G0036069.1 mouse_genomes_project 4 131381693 131385515 + Gm12971 sense_intronic sense_intronic MGP_WSBEiJ_T0067565.1 MGP_WSBEiJ_G0028190.1 mouse_genomes_project 4 138675198 138785565 + MGP_WSBEiJ_P0067565 Hspg2 protein_coding protein_coding MGP_WSBEiJ_T0067566.1 MGP_WSBEiJ_G0028190.1 mouse_genomes_project 4 138675230 138785564 + MGP_WSBEiJ_P0067566 Hspg2 protein_coding protein_coding MGP_WSBEiJ_T0067567.1 MGP_WSBEiJ_G0028190.1 mouse_genomes_project 4 138784088 138785042 + Hspg2 protein_coding processed_transcript MGP_WSBEiJ_T0010430.1 MGP_WSBEiJ_G0008587.1 mouse_genomes_project 4 86647963 86648028 + Gm23154 miRNA miRNA MGP_WSBEiJ_T0067201.1 MGP_WSBEiJ_G0028103.1 mouse_genomes_project 4 134349260 134358361 + MGP_WSBEiJ_P0067201 Fam46b protein_coding protein_coding MGP_WSBEiJ_T0007853.1 MGP_WSBEiJ_G0006417.1 mouse_genomes_project 4 131650463 131655528 - A930031H19Rik lincRNA lincRNA MGP_WSBEiJ_T0007854.1 MGP_WSBEiJ_G0006417.1 mouse_genomes_project 4 131650463 131660695 - A930031H19Rik lincRNA lincRNA MGP_WSBEiJ_T0010476.1 MGP_WSBEiJ_G0008633.1 mouse_genomes_project 4 142243085 142243149 + Gm25951 miRNA miRNA MGP_WSBEiJ_T0098237.1 MGP_WSBEiJ_G0036900.1 mouse_genomes_project 4 14382511 14382614 - Gm23384 snRNA snRNA MGP_WSBEiJ_T0007807.1 MGP_WSBEiJ_G0006385.1 mouse_genomes_project 4 114342740 114343384 - Gm28864 lincRNA lincRNA MGP_WSBEiJ_T0063658.1 MGP_WSBEiJ_G0027298.1 mouse_genomes_project 4 11258902 11379046 - MGP_WSBEiJ_P0063658 Slc26a7 protein_coding protein_coding MGP_WSBEiJ_T0063659.1 MGP_WSBEiJ_G0027298.1 mouse_genomes_project 4 11261761 11273039 - Slc26a7 protein_coding processed_transcript MGP_WSBEiJ_T0063660.1 MGP_WSBEiJ_G0027298.1 mouse_genomes_project 4 11325773 11378780 - MGP_WSBEiJ_P0063660 Slc26a7 protein_coding protein_coding MGP_WSBEiJ_T0063661.1 MGP_WSBEiJ_G0027298.1 mouse_genomes_project 4 11348481 11378910 - MGP_WSBEiJ_P0063661 Slc26a7 protein_coding protein_coding MGP_WSBEiJ_T0014283.1 MGP_WSBEiJ_G0012413.1 mouse_genomes_project 4 107558713 107559139 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014298.1 MGP_WSBEiJ_G0012428.1 mouse_genomes_project 4 111754368 111755361 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067265.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135000054 135038096 + MGP_WSBEiJ_P0067265 Aim1l protein_coding unknown_likely_coding MGP_WSBEiJ_T0067266.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135006377 135013189 + MGP_WSBEiJ_P0067266 Aim1l protein_coding protein_coding MGP_WSBEiJ_T0067267.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135008871 135038193 + MGP_WSBEiJ_P0067267 Aim1l protein_coding protein_coding MGP_WSBEiJ_T0067268.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135019315 135023164 + Aim1l protein_coding processed_transcript MGP_WSBEiJ_T0067269.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135019396 135029828 + MGP_WSBEiJ_P0067269 Aim1l protein_coding protein_coding MGP_WSBEiJ_T0067270.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135022789 135036788 + Aim1l protein_coding retained_intron MGP_WSBEiJ_T0067271.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135022789 135038190 + Aim1l protein_coding retained_intron MGP_WSBEiJ_T0067272.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135022792 135033152 + Aim1l protein_coding retained_intron MGP_WSBEiJ_T0067273.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135022827 135032716 + Aim1l protein_coding retained_intron MGP_WSBEiJ_T0067274.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135022913 135023347 + Aim1l protein_coding retained_intron MGP_WSBEiJ_T0067276.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135036506 135038075 + Aim1l protein_coding retained_intron MGP_WSBEiJ_T0067277.1 MGP_WSBEiJ_G0028118.1 mouse_genomes_project 4 135036841 135038185 + Aim1l protein_coding processed_transcript MGP_WSBEiJ_T0064076.1 MGP_WSBEiJ_G0027407.1 mouse_genomes_project 4 39379622 39380288 - MGP_WSBEiJ_P0064076 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064077.1 MGP_WSBEiJ_G0027407.1 mouse_genomes_project 4 39379622 39380279 - MGP_WSBEiJ_P0064077 protein_coding unknown_likely_coding MGP_WSBEiJ_T0014035.1 MGP_WSBEiJ_G0012165.1 mouse_genomes_project 4 15321283 15323393 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007671.1 MGP_WSBEiJ_G0006274.1 mouse_genomes_project 4 251685 263088 - Gm26857 lincRNA lincRNA MGP_WSBEiJ_T0066723.1 MGP_WSBEiJ_G0028010.1 mouse_genomes_project 4 128558561 128930276 + Csmd2 protein_coding processed_transcript MGP_WSBEiJ_T0066724.1 MGP_WSBEiJ_G0028010.1 mouse_genomes_project 4 128558741 129016669 + Csmd2 protein_coding retained_intron MGP_WSBEiJ_T0066725.1 MGP_WSBEiJ_G0028010.1 mouse_genomes_project 4 128558767 129164623 + MGP_WSBEiJ_P0066725 Csmd2 protein_coding protein_coding MGP_WSBEiJ_T0066727.1 MGP_WSBEiJ_G0028010.1 mouse_genomes_project 4 129073389 129096557 + Csmd2 protein_coding processed_transcript MGP_WSBEiJ_T0066728.1 MGP_WSBEiJ_G0028010.1 mouse_genomes_project 4 129116227 129125413 + Csmd2 protein_coding processed_transcript MGP_WSBEiJ_T0066729.1 MGP_WSBEiJ_G0028010.1 mouse_genomes_project 4 129144942 129149742 + Csmd2 protein_coding processed_transcript MGP_WSBEiJ_T0007694.1 MGP_WSBEiJ_G0006291.1 mouse_genomes_project 4 19342789 19347187 + lincRNA lincRNA MGP_WSBEiJ_T0099517.1 MGP_WSBEiJ_G0038180.1 mouse_genomes_project 4 46879384 46879509 + Gm23746 snoRNA snoRNA MGP_WSBEiJ_T0067952.1 MGP_WSBEiJ_G0028284.1 mouse_genomes_project 4 145977725 145982413 - MGP_WSBEiJ_P0067952 protein_coding protein_coding MGP_WSBEiJ_T0067905.1 MGP_WSBEiJ_G0028268.1 mouse_genomes_project 4 143408561 143441189 - MGP_WSBEiJ_P0067905 Ctrc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067907.1 MGP_WSBEiJ_G0028268.1 mouse_genomes_project 4 143433177 143441283 - Ctrc protein_coding processed_transcript MGP_WSBEiJ_T0067908.1 MGP_WSBEiJ_G0028268.1 mouse_genomes_project 4 143433177 143441209 - MGP_WSBEiJ_P0067908 Ctrc protein_coding protein_coding MGP_WSBEiJ_T0067909.1 MGP_WSBEiJ_G0028268.1 mouse_genomes_project 4 143433182 143441285 - MGP_WSBEiJ_P0067909 Ctrc protein_coding protein_coding MGP_WSBEiJ_T0067910.1 MGP_WSBEiJ_G0028268.1 mouse_genomes_project 4 143439764 143440158 - Ctrc protein_coding processed_transcript MGP_WSBEiJ_T0098276.1 MGP_WSBEiJ_G0036939.1 mouse_genomes_project 4 107860408 107860512 - Gm23354 snRNA snRNA MGP_WSBEiJ_T0064629.1 MGP_WSBEiJ_G0027522.1 mouse_genomes_project 4 53518077 53565185 + MGP_WSBEiJ_P0064629 Rad23b protein_coding protein_coding MGP_WSBEiJ_T0064630.1 MGP_WSBEiJ_G0027522.1 mouse_genomes_project 4 53518084 53536305 + Rad23b protein_coding processed_transcript MGP_WSBEiJ_T0064631.1 MGP_WSBEiJ_G0027522.1 mouse_genomes_project 4 53518086 53519219 + Rad23b protein_coding processed_transcript MGP_WSBEiJ_T0064632.1 MGP_WSBEiJ_G0027522.1 mouse_genomes_project 4 53518124 53551122 + Rad23b protein_coding processed_transcript MGP_WSBEiJ_T0067025.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132552767 132582804 + MGP_WSBEiJ_P0067025 Mecr protein_coding protein_coding MGP_WSBEiJ_T0067026.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132552790 132575857 + MGP_WSBEiJ_P0067026 Mecr protein_coding protein_coding MGP_WSBEiJ_T0067027.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132552802 132553306 + Mecr protein_coding processed_transcript MGP_WSBEiJ_T0067028.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132567348 132575992 + Mecr protein_coding processed_transcript MGP_WSBEiJ_T0067029.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132567407 132571807 + Mecr protein_coding processed_transcript MGP_WSBEiJ_T0067030.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132571372 132580318 + Mecr protein_coding processed_transcript MGP_WSBEiJ_T0067031.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132571398 132582804 + Mecr protein_coding processed_transcript MGP_WSBEiJ_T0067032.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132575242 132580060 + Mecr protein_coding processed_transcript MGP_WSBEiJ_T0067033.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132576703 132582619 + Mecr protein_coding processed_transcript MGP_WSBEiJ_T0067034.1 MGP_WSBEiJ_G0028067.1 mouse_genomes_project 4 132579762 132582794 + Mecr protein_coding processed_transcript MGP_WSBEiJ_T0017466.1 MGP_WSBEiJ_G0014973.1 mouse_genomes_project 4 72520053 72530584 + processed_transcript processed_transcript MGP_WSBEiJ_T0064900.1 MGP_WSBEiJ_G0027595.1 mouse_genomes_project 4 68928594 69125928 - MGP_WSBEiJ_P0064900 Cdk5rap2 protein_coding protein_coding MGP_WSBEiJ_T0064901.1 MGP_WSBEiJ_G0027595.1 mouse_genomes_project 4 68934754 69125903 - MGP_WSBEiJ_P0064901 Cdk5rap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064902.1 MGP_WSBEiJ_G0027595.1 mouse_genomes_project 4 68950073 68982288 - MGP_WSBEiJ_P0064902 Cdk5rap2 protein_coding protein_coding MGP_WSBEiJ_T0064903.1 MGP_WSBEiJ_G0027595.1 mouse_genomes_project 4 68954195 68955577 - Cdk5rap2 protein_coding processed_transcript MGP_WSBEiJ_T0064904.1 MGP_WSBEiJ_G0027595.1 mouse_genomes_project 4 69113140 69117802 - Cdk5rap2 protein_coding processed_transcript MGP_WSBEiJ_T0064769.1 MGP_WSBEiJ_G0027559.1 mouse_genomes_project 4 58429338 58433066 + MGP_WSBEiJ_P0064769 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0064770.1 MGP_WSBEiJ_G0027559.1 mouse_genomes_project 4 58429404 58433066 + MGP_WSBEiJ_P0064770 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0098294.1 MGP_WSBEiJ_G0036957.1 mouse_genomes_project 4 126658407 126658504 - Gm25323 snRNA snRNA MGP_WSBEiJ_T0014029.1 MGP_WSBEiJ_G0012159.1 mouse_genomes_project 4 13519080 13519739 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066667.1 MGP_WSBEiJ_G0027995.1 mouse_genomes_project 4 127227544 127248416 - MGP_WSBEiJ_P0066667 Tfap2e protein_coding protein_coding MGP_WSBEiJ_T0014329.1 MGP_WSBEiJ_G0012459.1 mouse_genomes_project 4 121548367 121548608 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007757.1 MGP_WSBEiJ_G0006347.1 mouse_genomes_project 4 81066292 81122832 + lincRNA lincRNA MGP_WSBEiJ_T0007758.1 MGP_WSBEiJ_G0006347.1 mouse_genomes_project 4 81066734 81068583 + lincRNA lincRNA MGP_WSBEiJ_T0007759.1 MGP_WSBEiJ_G0006347.1 mouse_genomes_project 4 81066818 81116927 + lincRNA lincRNA MGP_WSBEiJ_T0064594.1 MGP_WSBEiJ_G0027512.1 mouse_genomes_project 4 51087870 51088815 + MGP_WSBEiJ_P0064594 Olfr270 protein_coding protein_coding MGP_WSBEiJ_T0064595.1 MGP_WSBEiJ_G0027512.1 mouse_genomes_project 4 51087876 51088815 + MGP_WSBEiJ_P0064595 Olfr270 protein_coding protein_coding MGP_WSBEiJ_T0066067.1 MGP_WSBEiJ_G0027846.1 mouse_genomes_project 4 116703642 116705446 - MGP_WSBEiJ_P0066067 Hpdl protein_coding protein_coding MGP_WSBEiJ_T0098268.1 MGP_WSBEiJ_G0036931.1 mouse_genomes_project 4 94888409 94890190 + Gm25004 snRNA snRNA MGP_WSBEiJ_T0065497.1 MGP_WSBEiJ_G0027738.1 mouse_genomes_project 4 106422535 106472386 - MGP_WSBEiJ_P0065497 Mroh7 protein_coding protein_coding MGP_WSBEiJ_T0065498.1 MGP_WSBEiJ_G0027738.1 mouse_genomes_project 4 106422542 106451896 - Mroh7 protein_coding processed_transcript MGP_WSBEiJ_T0065499.1 MGP_WSBEiJ_G0027738.1 mouse_genomes_project 4 106422542 106450415 - Mroh7 protein_coding retained_intron MGP_WSBEiJ_T0065500.1 MGP_WSBEiJ_G0027738.1 mouse_genomes_project 4 106422755 106451582 - Mroh7 protein_coding processed_transcript MGP_WSBEiJ_T0065501.1 MGP_WSBEiJ_G0027738.1 mouse_genomes_project 4 106432829 106440664 - Mroh7 protein_coding processed_transcript MGP_WSBEiJ_T0065502.1 MGP_WSBEiJ_G0027738.1 mouse_genomes_project 4 106450356 106472432 - MGP_WSBEiJ_P0065502 Mroh7 protein_coding protein_coding MGP_WSBEiJ_T0065503.1 MGP_WSBEiJ_G0027738.1 mouse_genomes_project 4 106464649 106475376 - MGP_WSBEiJ_P0065503 Mroh7 protein_coding protein_coding MGP_WSBEiJ_T0066106.1 MGP_WSBEiJ_G0027854.1 mouse_genomes_project 4 117033526 117038816 - Plk3 protein_coding processed_transcript MGP_WSBEiJ_T0066107.1 MGP_WSBEiJ_G0027854.1 mouse_genomes_project 4 117033858 117038736 - MGP_WSBEiJ_P0066107 Plk3 protein_coding protein_coding MGP_WSBEiJ_T0014147.1 MGP_WSBEiJ_G0012277.1 mouse_genomes_project 4 53419945 53420405 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007778.1 MGP_WSBEiJ_G0006364.1 mouse_genomes_project 4 94771569 94772382 - Gm29064 lincRNA lincRNA MGP_WSBEiJ_T0011617.1 MGP_WSBEiJ_G0009764.1 mouse_genomes_project 4 118344927 118347708 + MGP_WSBEiJ_P0011617 Hyi polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011618.1 MGP_WSBEiJ_G0009764.1 mouse_genomes_project 4 118344936 118346257 + Hyi polymorphic_pseudogene retained_intron MGP_WSBEiJ_T0011619.1 MGP_WSBEiJ_G0009764.1 mouse_genomes_project 4 118344936 118347708 + MGP_WSBEiJ_P0011619 Hyi polymorphic_pseudogene nonsense_mediated_decay MGP_WSBEiJ_T0011620.1 MGP_WSBEiJ_G0009764.1 mouse_genomes_project 4 118344951 118347708 + MGP_WSBEiJ_P0011620 Hyi polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0011621.1 MGP_WSBEiJ_G0009764.1 mouse_genomes_project 4 118346285 118347459 + Hyi polymorphic_pseudogene retained_intron MGP_WSBEiJ_T0066219.1 MGP_WSBEiJ_G0009764.1 mouse_genomes_project 4 118344970 118347715 + MGP_WSBEiJ_P0066219 Hyi polymorphic_pseudogene unknown_likely_coding MGP_WSBEiJ_T0098254.1 MGP_WSBEiJ_G0036917.1 mouse_genomes_project 4 47484779 47484883 + Gm26424 snRNA snRNA MGP_WSBEiJ_T0066715.1 MGP_WSBEiJ_G0028004.1 mouse_genomes_project 4 127788793 127792807 + MGP_WSBEiJ_P0066715 Smim12 protein_coding protein_coding MGP_WSBEiJ_T0064772.1 MGP_WSBEiJ_G0027561.1 mouse_genomes_project 4 60659083 60677876 - MGP_WSBEiJ_P0064772 Zfp37 protein_coding protein_coding MGP_WSBEiJ_T0064773.1 MGP_WSBEiJ_G0027561.1 mouse_genomes_project 4 60660690 60677791 - MGP_WSBEiJ_P0064773 Zfp37 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064774.1 MGP_WSBEiJ_G0027561.1 mouse_genomes_project 4 60660690 60677791 - MGP_WSBEiJ_P0064774 Zfp37 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064775.1 MGP_WSBEiJ_G0027561.1 mouse_genomes_project 4 60662081 60677632 - Zfp37 protein_coding processed_transcript MGP_WSBEiJ_T0064776.1 MGP_WSBEiJ_G0027561.1 mouse_genomes_project 4 60662132 60677319 - Zfp37 protein_coding processed_transcript MGP_WSBEiJ_T0100832.1 MGP_WSBEiJ_G0039290.1 mouse_genomes_project 4 115448499 115450926 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0067953.1 MGP_WSBEiJ_G0028285.1 mouse_genomes_project 4 146162492 146169126 - MGP_WSBEiJ_P0067953 Gm13125 protein_coding protein_coding MGP_WSBEiJ_T0014167.1 MGP_WSBEiJ_G0012297.1 mouse_genomes_project 4 63626908 63627266 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068181.1 MGP_WSBEiJ_G0028340.1 mouse_genomes_project 4 151866182 151888857 - MGP_WSBEiJ_P0068181 Tmem201 protein_coding protein_coding MGP_WSBEiJ_T0068182.1 MGP_WSBEiJ_G0028340.1 mouse_genomes_project 4 151866190 151888857 - MGP_WSBEiJ_P0068182 Tmem201 protein_coding protein_coding MGP_WSBEiJ_T0068183.1 MGP_WSBEiJ_G0028340.1 mouse_genomes_project 4 151875664 151881494 - Tmem201 protein_coding retained_intron MGP_WSBEiJ_T0068184.1 MGP_WSBEiJ_G0028340.1 mouse_genomes_project 4 151875664 151888857 - MGP_WSBEiJ_P0068184 Tmem201 protein_coding protein_coding MGP_WSBEiJ_T0068185.1 MGP_WSBEiJ_G0028340.1 mouse_genomes_project 4 151879590 151888811 - Tmem201 protein_coding retained_intron MGP_WSBEiJ_T0068186.1 MGP_WSBEiJ_G0028340.1 mouse_genomes_project 4 151881970 151888583 - Tmem201 protein_coding processed_transcript MGP_WSBEiJ_T0064592.1 MGP_WSBEiJ_G0027511.1 mouse_genomes_project 4 51027477 51028439 - MGP_WSBEiJ_P0064592 Olfr272 protein_coding protein_coding MGP_WSBEiJ_T0064593.1 MGP_WSBEiJ_G0027511.1 mouse_genomes_project 4 51027477 51035823 - MGP_WSBEiJ_P0064593 Olfr272 protein_coding protein_coding MGP_WSBEiJ_T0014157.1 MGP_WSBEiJ_G0012287.1 mouse_genomes_project 4 56936955 56937372 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064020.1 MGP_WSBEiJ_G0027391.1 mouse_genomes_project 4 38993965 39009773 + MGP_WSBEiJ_P0064020 Nudt2 protein_coding protein_coding MGP_WSBEiJ_T0098298.1 MGP_WSBEiJ_G0036961.1 mouse_genomes_project 4 130627008 130627160 + Gm23845 snRNA snRNA MGP_WSBEiJ_T0065238.1 MGP_WSBEiJ_G0027674.1 mouse_genomes_project 4 95657474 95721955 - MGP_WSBEiJ_P0065238 Cyp2j11 protein_coding protein_coding MGP_WSBEiJ_T0017480.1 MGP_WSBEiJ_G0014984.1 mouse_genomes_project 4 103160983 103173859 - Gm12720 processed_transcript processed_transcript MGP_WSBEiJ_T0014085.1 MGP_WSBEiJ_G0012215.1 mouse_genomes_project 4 30394683 30394873 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065934.1 MGP_WSBEiJ_G0027821.1 mouse_genomes_project 4 115710785 115719333 + MGP_WSBEiJ_P0065934 6430628N08Rik protein_coding protein_coding MGP_WSBEiJ_T0004495.1 MGP_WSBEiJ_G0003902.1 mouse_genomes_project 4 143439249 143441916 + Ctrcos antisense antisense MGP_WSBEiJ_T0099536.1 MGP_WSBEiJ_G0038199.1 mouse_genomes_project 4 73393013 73393145 + Gm26379 snoRNA snoRNA MGP_WSBEiJ_T0064737.1 MGP_WSBEiJ_G0027551.1 mouse_genomes_project 4 57579553 57613625 + MGP_WSBEiJ_P0064737 Ugcg protein_coding protein_coding MGP_WSBEiJ_T0064738.1 MGP_WSBEiJ_G0027551.1 mouse_genomes_project 4 57579851 57602033 + Ugcg protein_coding processed_transcript MGP_WSBEiJ_T0064739.1 MGP_WSBEiJ_G0027551.1 mouse_genomes_project 4 57601549 57603741 + Ugcg protein_coding processed_transcript MGP_WSBEiJ_T0064740.1 MGP_WSBEiJ_G0027551.1 mouse_genomes_project 4 57602485 57604125 + Ugcg protein_coding processed_transcript MGP_WSBEiJ_T0007712.1 MGP_WSBEiJ_G0006309.1 mouse_genomes_project 4 40692222 40699250 + Gm26881 lincRNA lincRNA MGP_WSBEiJ_T0066571.1 MGP_WSBEiJ_G0027973.1 mouse_genomes_project 4 125460869 125491247 + MGP_WSBEiJ_P0066571 Meaf6 protein_coding protein_coding MGP_WSBEiJ_T0066572.1 MGP_WSBEiJ_G0027973.1 mouse_genomes_project 4 125460886 125487908 + MGP_WSBEiJ_P0066572 Meaf6 protein_coding protein_coding MGP_WSBEiJ_T0066573.1 MGP_WSBEiJ_G0027973.1 mouse_genomes_project 4 125460899 125487733 + MGP_WSBEiJ_P0066573 Meaf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066574.1 MGP_WSBEiJ_G0027973.1 mouse_genomes_project 4 125460900 125465901 + Meaf6 protein_coding processed_transcript MGP_WSBEiJ_T0066575.1 MGP_WSBEiJ_G0027973.1 mouse_genomes_project 4 125460996 125487471 + MGP_WSBEiJ_P0066575 Meaf6 protein_coding protein_coding MGP_WSBEiJ_T0066576.1 MGP_WSBEiJ_G0027973.1 mouse_genomes_project 4 125461923 125487476 + MGP_WSBEiJ_P0066576 Meaf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066577.1 MGP_WSBEiJ_G0027973.1 mouse_genomes_project 4 125465638 125480434 + Meaf6 protein_coding processed_transcript MGP_WSBEiJ_T0066578.1 MGP_WSBEiJ_G0027973.1 mouse_genomes_project 4 125486001 125487447 + Meaf6 protein_coding retained_intron MGP_WSBEiJ_T0014396.1 MGP_WSBEiJ_G0012526.1 mouse_genomes_project 4 150080769 150081231 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004451.1 MGP_WSBEiJ_G0003867.1 mouse_genomes_project 4 124206369 124218982 - Gm12905 antisense antisense MGP_WSBEiJ_T0004452.1 MGP_WSBEiJ_G0003867.1 mouse_genomes_project 4 124206537 124206816 - Gm12905 antisense antisense MGP_WSBEiJ_T0010487.1 MGP_WSBEiJ_G0008644.1 mouse_genomes_project 4 158660217 158660287 - Mir200b miRNA miRNA MGP_WSBEiJ_T0066888.1 MGP_WSBEiJ_G0028042.1 mouse_genomes_project 4 130312058 130316023 - MGP_WSBEiJ_P0066888 protein_coding protein_coding MGP_WSBEiJ_T0066889.1 MGP_WSBEiJ_G0028042.1 mouse_genomes_project 4 130312692 130313954 - protein_coding processed_transcript MGP_WSBEiJ_T0066890.1 MGP_WSBEiJ_G0028042.1 mouse_genomes_project 4 130314262 130316000 - protein_coding retained_intron MGP_WSBEiJ_T0066891.1 MGP_WSBEiJ_G0028042.1 mouse_genomes_project 4 130315021 130316020 - MGP_WSBEiJ_P0066891 protein_coding protein_coding MGP_WSBEiJ_T0066892.1 MGP_WSBEiJ_G0028042.1 mouse_genomes_project 4 130315165 130316004 - protein_coding processed_transcript MGP_WSBEiJ_T0096828.1 MGP_WSBEiJ_G0035509.1 mouse_genomes_project 4 158276703 158278843 + pseudogene pseudogene MGP_WSBEiJ_T0014088.1 MGP_WSBEiJ_G0012218.1 mouse_genomes_project 4 31650772 31651226 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065121.1 MGP_WSBEiJ_G0027633.1 mouse_genomes_project 4 87633163 87676568 - MGP_WSBEiJ_P0065121 Hacd4 protein_coding protein_coding MGP_WSBEiJ_T0065124.1 MGP_WSBEiJ_G0027633.1 mouse_genomes_project 4 87648152 87676581 - MGP_WSBEiJ_P0065124 Hacd4 protein_coding protein_coding MGP_WSBEiJ_T0065125.1 MGP_WSBEiJ_G0027633.1 mouse_genomes_project 4 87650741 87676579 - MGP_WSBEiJ_P0065125 Hacd4 protein_coding protein_coding MGP_WSBEiJ_T0014185.1 MGP_WSBEiJ_G0012315.1 mouse_genomes_project 4 72141644 72142819 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066758.1 MGP_WSBEiJ_G0028018.1 mouse_genomes_project 4 129555726 129589512 - MGP_WSBEiJ_P0066758 Azin2 protein_coding protein_coding MGP_WSBEiJ_T0066759.1 MGP_WSBEiJ_G0028018.1 mouse_genomes_project 4 129557515 129589520 - MGP_WSBEiJ_P0066759 Azin2 protein_coding protein_coding MGP_WSBEiJ_T0066760.1 MGP_WSBEiJ_G0028018.1 mouse_genomes_project 4 129557515 129589531 - MGP_WSBEiJ_P0066760 Azin2 protein_coding protein_coding MGP_WSBEiJ_T0066761.1 MGP_WSBEiJ_G0028018.1 mouse_genomes_project 4 129572945 129589531 - Azin2 protein_coding retained_intron MGP_WSBEiJ_T0066762.1 MGP_WSBEiJ_G0028018.1 mouse_genomes_project 4 129573387 129588490 - MGP_WSBEiJ_P0066762 Azin2 protein_coding protein_coding MGP_WSBEiJ_T0066763.1 MGP_WSBEiJ_G0028018.1 mouse_genomes_project 4 129574485 129589534 - Azin2 protein_coding retained_intron MGP_WSBEiJ_T0066764.1 MGP_WSBEiJ_G0028018.1 mouse_genomes_project 4 129587796 129589520 - Azin2 protein_coding retained_intron MGP_WSBEiJ_T0068077.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150677404 150692626 - MGP_WSBEiJ_P0068077 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068078.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150677404 150692603 - MGP_WSBEiJ_P0068078 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068079.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150677404 150692603 - MGP_WSBEiJ_P0068079 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068080.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150677404 150692603 - MGP_WSBEiJ_P0068080 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068081.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150677409 150692369 - MGP_WSBEiJ_P0068081 Tardbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068082.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150677410 150681148 - Tardbp protein_coding processed_transcript MGP_WSBEiJ_T0068083.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150677410 150684324 - MGP_WSBEiJ_P0068083 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068084.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150677507 150684833 - MGP_WSBEiJ_P0068084 Tardbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068085.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150680475 150683628 - Tardbp protein_coding processed_transcript MGP_WSBEiJ_T0068086.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150680768 150683405 - Tardbp protein_coding processed_transcript MGP_WSBEiJ_T0068087.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150680928 150692372 - MGP_WSBEiJ_P0068087 Tardbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068088.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150681645 150683920 - MGP_WSBEiJ_P0068088 Tardbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068089.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150681734 150692365 - MGP_WSBEiJ_P0068089 Tardbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068090.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150681735 150692365 - MGP_WSBEiJ_P0068090 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068091.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150682460 150686169 - MGP_WSBEiJ_P0068091 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068092.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150682643 150684233 - MGP_WSBEiJ_P0068092 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068093.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150682905 150684843 - MGP_WSBEiJ_P0068093 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068094.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150683003 150690955 - MGP_WSBEiJ_P0068094 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068095.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150683106 150690955 - MGP_WSBEiJ_P0068095 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068096.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150683106 150690955 - MGP_WSBEiJ_P0068096 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068097.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150683160 150687663 - MGP_WSBEiJ_P0068097 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068098.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150683587 150692377 - MGP_WSBEiJ_P0068098 Tardbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068099.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150684157 150692361 - MGP_WSBEiJ_P0068099 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068100.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150686244 150691933 - MGP_WSBEiJ_P0068100 Tardbp protein_coding protein_coding MGP_WSBEiJ_T0068101.1 MGP_WSBEiJ_G0028324.1 mouse_genomes_project 4 150690677 150692365 - Tardbp protein_coding retained_intron MGP_WSBEiJ_T0064596.1 MGP_WSBEiJ_G0027513.1 mouse_genomes_project 4 51107387 51118234 + MGP_WSBEiJ_P0064596 Nipsnap3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064597.1 MGP_WSBEiJ_G0027513.1 mouse_genomes_project 4 51107399 51118241 + MGP_WSBEiJ_P0064597 Nipsnap3a protein_coding protein_coding MGP_WSBEiJ_T0064598.1 MGP_WSBEiJ_G0027513.1 mouse_genomes_project 4 51107533 51118550 + MGP_WSBEiJ_P0064598 Nipsnap3a protein_coding protein_coding MGP_WSBEiJ_T0064599.1 MGP_WSBEiJ_G0027513.1 mouse_genomes_project 4 51117635 51118233 + Nipsnap3a protein_coding retained_intron MGP_WSBEiJ_T0067724.1 MGP_WSBEiJ_G0028224.1 mouse_genomes_project 4 140751557 140782049 + MGP_WSBEiJ_P0067724 Emc1 protein_coding protein_coding MGP_WSBEiJ_T0067725.1 MGP_WSBEiJ_G0028224.1 mouse_genomes_project 4 140751563 140782049 + MGP_WSBEiJ_P0067725 Emc1 protein_coding protein_coding MGP_WSBEiJ_T0067726.1 MGP_WSBEiJ_G0028224.1 mouse_genomes_project 4 140751563 140782049 + MGP_WSBEiJ_P0067726 Emc1 protein_coding protein_coding MGP_WSBEiJ_T0067727.1 MGP_WSBEiJ_G0028224.1 mouse_genomes_project 4 140751579 140753432 + Emc1 protein_coding processed_transcript MGP_WSBEiJ_T0067729.1 MGP_WSBEiJ_G0028224.1 mouse_genomes_project 4 140762592 140779248 + Emc1 protein_coding processed_transcript MGP_WSBEiJ_T0000314.1 MGP_WSBEiJ_G0000262.1 mouse_genomes_project 4 90377107 90377172 - Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0063630.1 MGP_WSBEiJ_G0027291.1 mouse_genomes_project 4 8691237 8692946 - MGP_WSBEiJ_P0063630 Gm10604 protein_coding protein_coding MGP_WSBEiJ_T0067922.1 MGP_WSBEiJ_G0028272.1 mouse_genomes_project 4 143722965 143841831 - MGP_WSBEiJ_P0067922 protein_coding protein_coding MGP_WSBEiJ_T0067923.1 MGP_WSBEiJ_G0028272.1 mouse_genomes_project 4 143735057 143743196 - protein_coding processed_transcript MGP_WSBEiJ_T0067924.1 MGP_WSBEiJ_G0028272.1 mouse_genomes_project 4 143743317 143789332 - MGP_WSBEiJ_P0067924 protein_coding protein_coding MGP_WSBEiJ_T0067925.1 MGP_WSBEiJ_G0028272.1 mouse_genomes_project 4 143767886 143870644 - MGP_WSBEiJ_P0067925 protein_coding protein_coding MGP_WSBEiJ_T0067926.1 MGP_WSBEiJ_G0028272.1 mouse_genomes_project 4 143767893 143841733 - MGP_WSBEiJ_P0067926 protein_coding protein_coding MGP_WSBEiJ_T0067927.1 MGP_WSBEiJ_G0028272.1 mouse_genomes_project 4 143767894 143775116 - protein_coding retained_intron MGP_WSBEiJ_T0067928.1 MGP_WSBEiJ_G0028272.1 mouse_genomes_project 4 143770191 143841831 - MGP_WSBEiJ_P0067928 protein_coding protein_coding MGP_WSBEiJ_T0067929.1 MGP_WSBEiJ_G0028272.1 mouse_genomes_project 4 143775420 143783227 - protein_coding retained_intron MGP_WSBEiJ_T0064715.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57160173 57280857 - MGP_WSBEiJ_P0064715 AI314180 protein_coding protein_coding MGP_WSBEiJ_T0064716.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57172504 57173723 - AI314180 protein_coding processed_transcript MGP_WSBEiJ_T0064717.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57173310 57280033 - MGP_WSBEiJ_P0064717 AI314180 protein_coding protein_coding MGP_WSBEiJ_T0064718.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57177210 57181490 - AI314180 protein_coding processed_transcript MGP_WSBEiJ_T0064719.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57181240 57195966 - AI314180 protein_coding processed_transcript MGP_WSBEiJ_T0064720.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57192443 57280030 - MGP_WSBEiJ_P0064720 AI314180 protein_coding protein_coding MGP_WSBEiJ_T0064721.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57194603 57196815 - AI314180 protein_coding processed_transcript MGP_WSBEiJ_T0064722.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57197975 57207351 - AI314180 protein_coding processed_transcript MGP_WSBEiJ_T0064723.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57206620 57280812 - MGP_WSBEiJ_P0064723 AI314180 protein_coding protein_coding MGP_WSBEiJ_T0064724.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57226362 57280857 - MGP_WSBEiJ_P0064724 AI314180 protein_coding protein_coding MGP_WSBEiJ_T0064725.1 MGP_WSBEiJ_G0027544.1 mouse_genomes_project 4 57236249 57280005 - MGP_WSBEiJ_P0064725 AI314180 protein_coding protein_coding MGP_WSBEiJ_T0014095.1 MGP_WSBEiJ_G0012225.1 mouse_genomes_project 4 33305880 33306822 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065918.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656303 115699379 + Mknk1 protein_coding processed_transcript MGP_WSBEiJ_T0065919.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656303 115699379 + MGP_WSBEiJ_P0065919 Mknk1 protein_coding protein_coding MGP_WSBEiJ_T0065920.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656326 115683021 + MGP_WSBEiJ_P0065920 Mknk1 protein_coding protein_coding MGP_WSBEiJ_T0065921.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656328 115693987 + Mknk1 protein_coding processed_transcript MGP_WSBEiJ_T0065922.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656338 115665690 + Mknk1 protein_coding processed_transcript MGP_WSBEiJ_T0065923.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656338 115699379 + MGP_WSBEiJ_P0065923 Mknk1 protein_coding protein_coding MGP_WSBEiJ_T0065924.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656340 115684988 + MGP_WSBEiJ_P0065924 Mknk1 protein_coding protein_coding MGP_WSBEiJ_T0065925.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656345 115683058 + MGP_WSBEiJ_P0065925 Mknk1 protein_coding protein_coding MGP_WSBEiJ_T0065926.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656349 115674204 + MGP_WSBEiJ_P0065926 Mknk1 protein_coding protein_coding MGP_WSBEiJ_T0065927.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115656365 115681717 + Mknk1 protein_coding processed_transcript MGP_WSBEiJ_T0065928.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115674138 115698793 + Mknk1 protein_coding processed_transcript MGP_WSBEiJ_T0065929.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115674212 115696727 + Mknk1 protein_coding processed_transcript MGP_WSBEiJ_T0065930.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115684722 115685783 + Mknk1 protein_coding processed_transcript MGP_WSBEiJ_T0065931.1 MGP_WSBEiJ_G0027819.1 mouse_genomes_project 4 115694887 115697169 + Mknk1 protein_coding processed_transcript MGP_WSBEiJ_T0064733.1 MGP_WSBEiJ_G0027549.1 mouse_genomes_project 4 57413744 57421486 + MGP_WSBEiJ_P0064733 Gng10 protein_coding protein_coding MGP_WSBEiJ_T0064734.1 MGP_WSBEiJ_G0027549.1 mouse_genomes_project 4 57414428 57421486 + Gng10 protein_coding processed_transcript MGP_WSBEiJ_T0064300.1 MGP_WSBEiJ_G0027444.1 mouse_genomes_project 4 41550513 41624241 + Reck protein_coding processed_transcript MGP_WSBEiJ_T0064301.1 MGP_WSBEiJ_G0027444.1 mouse_genomes_project 4 41550513 41624302 + MGP_WSBEiJ_P0064301 Reck protein_coding protein_coding MGP_WSBEiJ_T0064302.1 MGP_WSBEiJ_G0027444.1 mouse_genomes_project 4 41619903 41621878 + Reck protein_coding processed_transcript MGP_WSBEiJ_T0004389.1 MGP_WSBEiJ_G0003824.1 mouse_genomes_project 4 81716464 81717371 + Gm11269 antisense antisense MGP_WSBEiJ_T0067779.1 MGP_WSBEiJ_G0028239.1 mouse_genomes_project 4 142447221 142489060 + MGP_WSBEiJ_P0067779 Padi2 protein_coding protein_coding MGP_WSBEiJ_T0067780.1 MGP_WSBEiJ_G0028239.1 mouse_genomes_project 4 142464524 142473202 + Padi2 protein_coding processed_transcript MGP_WSBEiJ_T0067781.1 MGP_WSBEiJ_G0028239.1 mouse_genomes_project 4 142483029 142486211 + Padi2 protein_coding processed_transcript MGP_WSBEiJ_T0067782.1 MGP_WSBEiJ_G0028240.1 mouse_genomes_project 4 142497671 142516821 + MGP_WSBEiJ_P0067782 Sdhb protein_coding protein_coding MGP_WSBEiJ_T0067783.1 MGP_WSBEiJ_G0028240.1 mouse_genomes_project 4 142497869 142514307 + Sdhb protein_coding processed_transcript MGP_WSBEiJ_T0067784.1 MGP_WSBEiJ_G0028240.1 mouse_genomes_project 4 142497871 142511801 + Sdhb protein_coding processed_transcript MGP_WSBEiJ_T0099505.1 MGP_WSBEiJ_G0038168.1 mouse_genomes_project 4 30912224 30912349 - Gm24341 snoRNA snoRNA MGP_WSBEiJ_T0014086.1 MGP_WSBEiJ_G0012216.1 mouse_genomes_project 4 30662724 30663123 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014317.1 MGP_WSBEiJ_G0012447.1 mouse_genomes_project 4 118512038 118512630 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004518.1 MGP_WSBEiJ_G0003918.1 mouse_genomes_project 4 151605151 151610010 + antisense antisense MGP_WSBEiJ_T0068306.1 MGP_WSBEiJ_G0028365.1 mouse_genomes_project 4 154351094 154369240 + Nol9 protein_coding retained_intron MGP_WSBEiJ_T0068307.1 MGP_WSBEiJ_G0028365.1 mouse_genomes_project 4 154351100 154377215 + MGP_WSBEiJ_P0068307 Nol9 protein_coding protein_coding MGP_WSBEiJ_T0068308.1 MGP_WSBEiJ_G0028365.1 mouse_genomes_project 4 154351109 154373409 + Nol9 protein_coding retained_intron MGP_WSBEiJ_T0068309.1 MGP_WSBEiJ_G0028365.1 mouse_genomes_project 4 154351109 154378684 + MGP_WSBEiJ_P0068309 Nol9 protein_coding protein_coding MGP_WSBEiJ_T0068310.1 MGP_WSBEiJ_G0028365.1 mouse_genomes_project 4 154351136 154377233 + MGP_WSBEiJ_P0068310 Nol9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097214.1 MGP_WSBEiJ_G0035895.1 mouse_genomes_project 4 85699039 85699170 - Scarna8 scaRNA scaRNA MGP_WSBEiJ_T0067987.1 MGP_WSBEiJ_G0028302.1 mouse_genomes_project 4 149845464 149854554 - MGP_WSBEiJ_P0067987 Miip protein_coding protein_coding MGP_WSBEiJ_T0067988.1 MGP_WSBEiJ_G0028302.1 mouse_genomes_project 4 149845472 149854651 - MGP_WSBEiJ_P0067988 Miip protein_coding protein_coding MGP_WSBEiJ_T0067989.1 MGP_WSBEiJ_G0028302.1 mouse_genomes_project 4 149845476 149847447 - Miip protein_coding retained_intron MGP_WSBEiJ_T0067990.1 MGP_WSBEiJ_G0028302.1 mouse_genomes_project 4 149845477 149854334 - Miip protein_coding retained_intron MGP_WSBEiJ_T0067991.1 MGP_WSBEiJ_G0028302.1 mouse_genomes_project 4 149845477 149854318 - MGP_WSBEiJ_P0067991 Miip protein_coding protein_coding MGP_WSBEiJ_T0067992.1 MGP_WSBEiJ_G0028302.1 mouse_genomes_project 4 149847484 149854501 - Miip protein_coding retained_intron MGP_WSBEiJ_T0067993.1 MGP_WSBEiJ_G0028302.1 mouse_genomes_project 4 149848237 149851372 - Miip protein_coding retained_intron MGP_WSBEiJ_T0067994.1 MGP_WSBEiJ_G0028302.1 mouse_genomes_project 4 149851960 149854358 - Miip protein_coding retained_intron MGP_WSBEiJ_T0097397.1 MGP_WSBEiJ_G0036071.1 mouse_genomes_project 4 143653915 143661540 - Gm13053 sense_intronic sense_intronic MGP_WSBEiJ_T0064306.1 MGP_WSBEiJ_G0027447.1 mouse_genomes_project 4 41690271 41718659 + MGP_WSBEiJ_P0064306 Clta protein_coding protein_coding MGP_WSBEiJ_T0064307.1 MGP_WSBEiJ_G0027447.1 mouse_genomes_project 4 41698419 41718659 + MGP_WSBEiJ_P0064307 Clta protein_coding protein_coding MGP_WSBEiJ_T0064308.1 MGP_WSBEiJ_G0027447.1 mouse_genomes_project 4 41698424 41718658 + MGP_WSBEiJ_P0064308 Clta protein_coding protein_coding MGP_WSBEiJ_T0064309.1 MGP_WSBEiJ_G0027447.1 mouse_genomes_project 4 41698459 41718659 + MGP_WSBEiJ_P0064309 Clta protein_coding protein_coding MGP_WSBEiJ_T0064310.1 MGP_WSBEiJ_G0027447.1 mouse_genomes_project 4 41698459 41718659 + MGP_WSBEiJ_P0064310 Clta protein_coding protein_coding MGP_WSBEiJ_T0064311.1 MGP_WSBEiJ_G0027447.1 mouse_genomes_project 4 41698467 41718659 + MGP_WSBEiJ_P0064311 Clta protein_coding protein_coding MGP_WSBEiJ_T0099560.1 MGP_WSBEiJ_G0038223.1 mouse_genomes_project 4 123547821 123547952 + Gm22154 snoRNA snoRNA MGP_WSBEiJ_T0065446.1 MGP_WSBEiJ_G0027720.1 mouse_genomes_project 4 102926138 102981206 + MGP_WSBEiJ_P0065446 Oma1 protein_coding protein_coding MGP_WSBEiJ_T0065447.1 MGP_WSBEiJ_G0027720.1 mouse_genomes_project 4 102938279 102943678 + Oma1 protein_coding processed_transcript MGP_WSBEiJ_T0065448.1 MGP_WSBEiJ_G0027720.1 mouse_genomes_project 4 102943696 102986640 + Oma1 protein_coding processed_transcript MGP_WSBEiJ_T0065138.1 MGP_WSBEiJ_G0027642.1 mouse_genomes_project 4 87915730 87916250 - MGP_WSBEiJ_P0065138 protein_coding protein_coding MGP_WSBEiJ_T0064251.1 MGP_WSBEiJ_G0027432.1 mouse_genomes_project 4 41223337 41234963 - Gba2 protein_coding retained_intron MGP_WSBEiJ_T0064252.1 MGP_WSBEiJ_G0027432.1 mouse_genomes_project 4 41223337 41234515 - Gba2 protein_coding retained_intron MGP_WSBEiJ_T0064253.1 MGP_WSBEiJ_G0027432.1 mouse_genomes_project 4 41223337 41235299 - MGP_WSBEiJ_P0064253 Gba2 protein_coding protein_coding MGP_WSBEiJ_T0064254.1 MGP_WSBEiJ_G0027432.1 mouse_genomes_project 4 41223338 41234515 - Gba2 protein_coding retained_intron MGP_WSBEiJ_T0064255.1 MGP_WSBEiJ_G0027432.1 mouse_genomes_project 4 41224803 41226052 - Gba2 protein_coding retained_intron MGP_WSBEiJ_T0064256.1 MGP_WSBEiJ_G0027432.1 mouse_genomes_project 4 41226765 41230464 - Gba2 protein_coding processed_transcript MGP_WSBEiJ_T0064257.1 MGP_WSBEiJ_G0027432.1 mouse_genomes_project 4 41227171 41235062 - MGP_WSBEiJ_P0064257 Gba2 protein_coding protein_coding MGP_WSBEiJ_T0067956.1 MGP_WSBEiJ_G0028287.1 mouse_genomes_project 4 146209779 146230208 - MGP_WSBEiJ_P0067956 1700012P22Rik protein_coding protein_coding MGP_WSBEiJ_T0066928.1 MGP_WSBEiJ_G0028049.1 mouse_genomes_project 4 130666821 130697277 + MGP_WSBEiJ_P0066928 Spocd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0066929.1 MGP_WSBEiJ_G0028049.1 mouse_genomes_project 4 130688007 130693866 + MGP_WSBEiJ_P0066929 Spocd1 protein_coding protein_coding MGP_WSBEiJ_T0066930.1 MGP_WSBEiJ_G0028049.1 mouse_genomes_project 4 130688181 130697399 + MGP_WSBEiJ_P0066930 Spocd1 protein_coding protein_coding MGP_WSBEiJ_T0014162.1 MGP_WSBEiJ_G0012292.1 mouse_genomes_project 4 61166511 61194327 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004410.1 MGP_WSBEiJ_G0003835.1 mouse_genomes_project 4 100042882 100047433 - Ube2uos antisense antisense MGP_WSBEiJ_T0068154.1 MGP_WSBEiJ_G0028335.1 mouse_genomes_project 4 151594134 151611678 - MGP_WSBEiJ_P0068154 Nmnat1 protein_coding protein_coding MGP_WSBEiJ_T0068155.1 MGP_WSBEiJ_G0028335.1 mouse_genomes_project 4 151595083 151611674 - MGP_WSBEiJ_P0068155 Nmnat1 protein_coding protein_coding MGP_WSBEiJ_T0068156.1 MGP_WSBEiJ_G0028335.1 mouse_genomes_project 4 151595123 151611648 - MGP_WSBEiJ_P0068156 Nmnat1 protein_coding protein_coding MGP_WSBEiJ_T0068157.1 MGP_WSBEiJ_G0028335.1 mouse_genomes_project 4 151600907 151611639 - MGP_WSBEiJ_P0068157 Nmnat1 protein_coding protein_coding MGP_WSBEiJ_T0068304.1 MGP_WSBEiJ_G0028364.1 mouse_genomes_project 4 154339928 154350342 - MGP_WSBEiJ_P0068304 Tas1r1 protein_coding protein_coding MGP_WSBEiJ_T0068305.1 MGP_WSBEiJ_G0028364.1 mouse_genomes_project 4 154340080 154349188 - MGP_WSBEiJ_P0068305 Tas1r1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0014160.1 MGP_WSBEiJ_G0012290.1 mouse_genomes_project 4 57934564 57934832 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064401.1 MGP_WSBEiJ_G0027459.1 mouse_genomes_project 4 43090380 43094368 - MGP_WSBEiJ_P0064401 Exosc3 protein_coding protein_coding MGP_WSBEiJ_T0064402.1 MGP_WSBEiJ_G0027459.1 mouse_genomes_project 4 43090562 43094075 - Exosc3 protein_coding processed_transcript MGP_WSBEiJ_T0064403.1 MGP_WSBEiJ_G0027459.1 mouse_genomes_project 4 43090722 43117422 - MGP_WSBEiJ_P0064403 Exosc3 protein_coding protein_coding MGP_WSBEiJ_T0064404.1 MGP_WSBEiJ_G0027459.1 mouse_genomes_project 4 43091203 43094343 - Exosc3 protein_coding processed_transcript MGP_WSBEiJ_T0004505.1 MGP_WSBEiJ_G0003909.1 mouse_genomes_project 4 150007748 150010485 - Gm13054 antisense antisense MGP_WSBEiJ_T0100810.1 MGP_WSBEiJ_G0039268.1 mouse_genomes_project 4 51052054 51053006 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0065317.1 MGP_WSBEiJ_G0027692.1 mouse_genomes_project 4 98782093 98783508 + MGP_WSBEiJ_P0065317 Gm12689 protein_coding protein_coding MGP_WSBEiJ_T0063568.1 MGP_WSBEiJ_G0027278.1 mouse_genomes_project 4 7648280 7668975 - MGP_WSBEiJ_P0063568 Plekhf2 protein_coding protein_coding MGP_WSBEiJ_T0063569.1 MGP_WSBEiJ_G0027278.1 mouse_genomes_project 4 7650367 7669226 - MGP_WSBEiJ_P0063569 Plekhf2 protein_coding protein_coding MGP_WSBEiJ_T0063757.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21338805 21430796 + Mms22l protein_coding retained_intron MGP_WSBEiJ_T0063758.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21338805 21452426 + MGP_WSBEiJ_P0063758 Mms22l protein_coding protein_coding MGP_WSBEiJ_T0063759.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21338816 21346095 + MGP_WSBEiJ_P0063759 Mms22l protein_coding protein_coding MGP_WSBEiJ_T0063760.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21338819 21339399 + Mms22l protein_coding processed_transcript MGP_WSBEiJ_T0063761.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21338898 21452422 + MGP_WSBEiJ_P0063761 Mms22l protein_coding protein_coding MGP_WSBEiJ_T0063762.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21340281 21374101 + MGP_WSBEiJ_P0063762 Mms22l protein_coding protein_coding MGP_WSBEiJ_T0063763.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21348315 21452425 + Mms22l protein_coding retained_intron MGP_WSBEiJ_T0063764.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21350676 21449459 + MGP_WSBEiJ_P0063764 Mms22l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063765.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21381288 21424253 + MGP_WSBEiJ_P0063765 Mms22l protein_coding protein_coding MGP_WSBEiJ_T0063766.1 MGP_WSBEiJ_G0027329.1 mouse_genomes_project 4 21428305 21440676 + Mms22l protein_coding processed_transcript MGP_WSBEiJ_T0014403.1 MGP_WSBEiJ_G0012533.1 mouse_genomes_project 4 153079598 153080710 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063486.1 MGP_WSBEiJ_G0027263.1 mouse_genomes_project 4 775587 780483 - MGP_WSBEiJ_P0063486 Penk protein_coding protein_coding MGP_WSBEiJ_T0063487.1 MGP_WSBEiJ_G0027263.1 mouse_genomes_project 4 776168 780825 - MGP_WSBEiJ_P0063487 Penk protein_coding protein_coding MGP_WSBEiJ_T0017455.1 MGP_WSBEiJ_G0014966.1 mouse_genomes_project 4 43572347 43574210 - Gm12409 processed_transcript processed_transcript MGP_WSBEiJ_T0099543.1 MGP_WSBEiJ_G0038206.1 mouse_genomes_project 4 92890008 92890136 - Gm23443 snoRNA snoRNA MGP_WSBEiJ_T0010438.1 MGP_WSBEiJ_G0008595.1 mouse_genomes_project 4 100885212 100885295 - Mir101a miRNA miRNA MGP_WSBEiJ_T0007835.1 MGP_WSBEiJ_G0006404.1 mouse_genomes_project 4 128098202 128127572 + A630031M04Rik lincRNA lincRNA MGP_WSBEiJ_T0014215.1 MGP_WSBEiJ_G0012345.1 mouse_genomes_project 4 82623217 82623680 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014198.1 MGP_WSBEiJ_G0012328.1 mouse_genomes_project 4 75524656 75527112 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063833.1 MGP_WSBEiJ_G0027344.1 mouse_genomes_project 4 29969091 30033253 - MGP_WSBEiJ_P0063833 Ankrd6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0063834.1 MGP_WSBEiJ_G0027344.1 mouse_genomes_project 4 29969371 30123739 - MGP_WSBEiJ_P0063834 Ankrd6 protein_coding protein_coding MGP_WSBEiJ_T0063835.1 MGP_WSBEiJ_G0027344.1 mouse_genomes_project 4 29971076 30028981 - MGP_WSBEiJ_P0063835 Ankrd6 protein_coding protein_coding MGP_WSBEiJ_T0063836.1 MGP_WSBEiJ_G0027344.1 mouse_genomes_project 4 29989583 29991105 - Ankrd6 protein_coding processed_transcript MGP_WSBEiJ_T0063837.1 MGP_WSBEiJ_G0027344.1 mouse_genomes_project 4 29992767 30092482 - Ankrd6 protein_coding processed_transcript MGP_WSBEiJ_T0063838.1 MGP_WSBEiJ_G0027344.1 mouse_genomes_project 4 29995387 30029222 - Ankrd6 protein_coding processed_transcript MGP_WSBEiJ_T0010459.1 MGP_WSBEiJ_G0008616.1 mouse_genomes_project 4 133180472 133180568 + Gm25707 miRNA miRNA MGP_WSBEiJ_T0065673.1 MGP_WSBEiJ_G0027764.1 mouse_genomes_project 4 108062105 108129053 - MGP_WSBEiJ_P0065673 Zyg11b protein_coding protein_coding MGP_WSBEiJ_T0065674.1 MGP_WSBEiJ_G0027764.1 mouse_genomes_project 4 108073825 108074397 - Zyg11b protein_coding processed_transcript MGP_WSBEiJ_T0001380.1 MGP_WSBEiJ_G0001309.1 mouse_genomes_project 4 106022927 106023957 - TEC TEC MGP_WSBEiJ_T0066391.1 MGP_WSBEiJ_G0027918.1 mouse_genomes_project 4 120639281 120643712 + MGP_WSBEiJ_P0066391 Slfnl1 protein_coding protein_coding MGP_WSBEiJ_T0010407.1 MGP_WSBEiJ_G0008564.1 mouse_genomes_project 4 27822578 27822687 - Gm22831 miRNA miRNA MGP_WSBEiJ_T0007803.1 MGP_WSBEiJ_G0006382.1 mouse_genomes_project 4 107584246 107590467 + 4933424M12Rik lincRNA lincRNA MGP_WSBEiJ_T0007804.1 MGP_WSBEiJ_G0006382.1 mouse_genomes_project 4 107588394 107590467 + 4933424M12Rik lincRNA lincRNA MGP_WSBEiJ_T0014068.1 MGP_WSBEiJ_G0012198.1 mouse_genomes_project 4 25613680 25614439 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064852.1 MGP_WSBEiJ_G0027580.1 mouse_genomes_project 4 61891088 61894696 + MGP_WSBEiJ_P0064852 Orm3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0063524.1 MGP_WSBEiJ_G0027271.1 mouse_genomes_project 4 4773014 4863829 - MGP_WSBEiJ_P0063524 Car8 protein_coding protein_coding MGP_WSBEiJ_T0004483.1 MGP_WSBEiJ_G0003892.1 mouse_genomes_project 4 139417649 139418574 - 1700095J12Rik antisense antisense MGP_WSBEiJ_T0064062.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39298141 39301609 + MGP_WSBEiJ_P0064062 Galt protein_coding protein_coding MGP_WSBEiJ_T0064063.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39298141 39301609 + MGP_WSBEiJ_P0064063 Galt protein_coding protein_coding MGP_WSBEiJ_T0064064.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39298166 39300463 + Galt protein_coding processed_transcript MGP_WSBEiJ_T0064065.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39298166 39299361 + Galt protein_coding processed_transcript MGP_WSBEiJ_T0064066.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39298671 39300394 + Galt protein_coding processed_transcript MGP_WSBEiJ_T0064067.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39298753 39300186 + Galt protein_coding processed_transcript MGP_WSBEiJ_T0064068.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39298874 39300394 + Galt protein_coding processed_transcript MGP_WSBEiJ_T0064069.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39299123 39301609 + Galt protein_coding processed_transcript MGP_WSBEiJ_T0064070.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39299167 39301152 + Galt protein_coding processed_transcript MGP_WSBEiJ_T0064071.1 MGP_WSBEiJ_G0027402.1 mouse_genomes_project 4 39299175 39300692 + Galt protein_coding processed_transcript MGP_WSBEiJ_T0065415.1 MGP_WSBEiJ_G0027716.1 mouse_genomes_project 4 102641298 102678647 - Wdr78 protein_coding retained_intron MGP_WSBEiJ_T0065416.1 MGP_WSBEiJ_G0027716.1 mouse_genomes_project 4 102641298 102721374 - MGP_WSBEiJ_P0065416 Wdr78 protein_coding protein_coding MGP_WSBEiJ_T0065417.1 MGP_WSBEiJ_G0027716.1 mouse_genomes_project 4 102641302 102721630 - MGP_WSBEiJ_P0065417 Wdr78 protein_coding protein_coding MGP_WSBEiJ_T0065418.1 MGP_WSBEiJ_G0027716.1 mouse_genomes_project 4 102641302 102721299 - MGP_WSBEiJ_P0065418 Wdr78 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065419.1 MGP_WSBEiJ_G0027716.1 mouse_genomes_project 4 102641334 102681264 - Wdr78 protein_coding retained_intron MGP_WSBEiJ_T0065420.1 MGP_WSBEiJ_G0027716.1 mouse_genomes_project 4 102642505 102644833 - Wdr78 protein_coding processed_transcript MGP_WSBEiJ_T0065421.1 MGP_WSBEiJ_G0027716.1 mouse_genomes_project 4 102642524 102678468 - MGP_WSBEiJ_P0065421 Wdr78 protein_coding protein_coding MGP_WSBEiJ_T0065422.1 MGP_WSBEiJ_G0027716.1 mouse_genomes_project 4 102687587 102693007 - MGP_WSBEiJ_P0065422 Wdr78 protein_coding protein_coding MGP_WSBEiJ_T0067960.1 MGP_WSBEiJ_G0028291.1 mouse_genomes_project 4 146356414 146366434 - MGP_WSBEiJ_P0067960 Gm13124 protein_coding protein_coding MGP_WSBEiJ_T0067465.1 MGP_WSBEiJ_G0028161.1 mouse_genomes_project 4 137021669 137039237 + MGP_WSBEiJ_P0067465 Hmgcl protein_coding protein_coding MGP_WSBEiJ_T0067466.1 MGP_WSBEiJ_G0028161.1 mouse_genomes_project 4 137035991 137039237 + Hmgcl protein_coding processed_transcript MGP_WSBEiJ_T0067467.1 MGP_WSBEiJ_G0028161.1 mouse_genomes_project 4 137036955 137038836 + Hmgcl protein_coding processed_transcript MGP_WSBEiJ_T0066468.1 MGP_WSBEiJ_G0027944.1 mouse_genomes_project 4 123431880 123443355 + MGP_WSBEiJ_P0066468 Hpcal4 protein_coding protein_coding MGP_WSBEiJ_T0066469.1 MGP_WSBEiJ_G0027944.1 mouse_genomes_project 4 123431892 123440167 + MGP_WSBEiJ_P0066469 Hpcal4 protein_coding protein_coding MGP_WSBEiJ_T0066470.1 MGP_WSBEiJ_G0027944.1 mouse_genomes_project 4 123432152 123437452 + MGP_WSBEiJ_P0066470 Hpcal4 protein_coding protein_coding MGP_WSBEiJ_T0066471.1 MGP_WSBEiJ_G0027944.1 mouse_genomes_project 4 123432169 123432803 + Hpcal4 protein_coding processed_transcript MGP_WSBEiJ_T0066472.1 MGP_WSBEiJ_G0027944.1 mouse_genomes_project 4 123432382 123439398 + MGP_WSBEiJ_P0066472 Hpcal4 protein_coding protein_coding MGP_WSBEiJ_T0098279.1 MGP_WSBEiJ_G0036942.1 mouse_genomes_project 4 108370319 108370426 - Gm25827 snRNA snRNA MGP_WSBEiJ_T0065142.1 MGP_WSBEiJ_G0027646.1 mouse_genomes_project 4 87966859 87967897 + MGP_WSBEiJ_P0065142 Gm26566 protein_coding protein_coding MGP_WSBEiJ_T0065340.1 MGP_WSBEiJ_G0027700.1 mouse_genomes_project 4 100294739 100534104 + MGP_WSBEiJ_P0065340 Cachd1 protein_coding protein_coding MGP_WSBEiJ_T0065341.1 MGP_WSBEiJ_G0027700.1 mouse_genomes_project 4 100294739 100554257 + MGP_WSBEiJ_P0065341 Cachd1 protein_coding protein_coding MGP_WSBEiJ_T0065342.1 MGP_WSBEiJ_G0027700.1 mouse_genomes_project 4 100524128 100532618 + Cachd1 protein_coding processed_transcript MGP_WSBEiJ_T0065343.1 MGP_WSBEiJ_G0027700.1 mouse_genomes_project 4 100524227 100532788 + Cachd1 protein_coding processed_transcript MGP_WSBEiJ_T0014392.1 MGP_WSBEiJ_G0012522.1 mouse_genomes_project 4 147341032 147341443 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014303.1 MGP_WSBEiJ_G0012433.1 mouse_genomes_project 4 115523007 115524084 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007775.1 MGP_WSBEiJ_G0006362.1 mouse_genomes_project 4 94448408 94450745 - 4930551L18Rik lincRNA lincRNA MGP_WSBEiJ_T0004510.1 MGP_WSBEiJ_G0003913.1 mouse_genomes_project 4 151044073 151045496 - Gm13205 antisense antisense MGP_WSBEiJ_T0010460.1 MGP_WSBEiJ_G0008617.1 mouse_genomes_project 4 134032274 134032336 + Mir7017 miRNA miRNA MGP_WSBEiJ_T0064893.1 MGP_WSBEiJ_G0027593.1 mouse_genomes_project 4 65450925 65466142 + MGP_WSBEiJ_P0064893 Tlr4 protein_coding protein_coding MGP_WSBEiJ_T0064894.1 MGP_WSBEiJ_G0027593.1 mouse_genomes_project 4 65450954 65554785 + MGP_WSBEiJ_P0064894 Tlr4 protein_coding protein_coding MGP_WSBEiJ_T0064895.1 MGP_WSBEiJ_G0027593.1 mouse_genomes_project 4 65450960 65462780 + Tlr4 protein_coding processed_transcript MGP_WSBEiJ_T0064896.1 MGP_WSBEiJ_G0027593.1 mouse_genomes_project 4 65451543 65462969 + Tlr4 protein_coding processed_transcript MGP_WSBEiJ_T0068757.1 MGP_WSBEiJ_G0028446.1 mouse_genomes_project 4 158841575 158847304 - MGP_WSBEiJ_P0068757 Klhl17 protein_coding protein_coding MGP_WSBEiJ_T0066551.1 MGP_WSBEiJ_G0027967.1 mouse_genomes_project 4 125239765 125245756 + MGP_WSBEiJ_P0066551 protein_coding protein_coding MGP_WSBEiJ_T0066552.1 MGP_WSBEiJ_G0027967.1 mouse_genomes_project 4 125244624 125282492 + MGP_WSBEiJ_P0066552 protein_coding protein_coding MGP_WSBEiJ_T0066553.1 MGP_WSBEiJ_G0027967.1 mouse_genomes_project 4 125260869 125264129 + protein_coding processed_transcript MGP_WSBEiJ_T0066550.1 MGP_WSBEiJ_G0027966.1 mouse_genomes_project 4 125212065 125219003 - MGP_WSBEiJ_P0066550 Maneal protein_coding protein_coding MGP_WSBEiJ_T0066005.1 MGP_WSBEiJ_G0027834.1 mouse_genomes_project 4 116371269 116403806 + MGP_WSBEiJ_P0066005 Ipp protein_coding protein_coding MGP_WSBEiJ_T0066006.1 MGP_WSBEiJ_G0027834.1 mouse_genomes_project 4 116371272 116403814 + MGP_WSBEiJ_P0066006 Ipp protein_coding protein_coding MGP_WSBEiJ_T0004469.1 MGP_WSBEiJ_G0003881.1 mouse_genomes_project 4 133320234 133321148 + Gm12999 antisense antisense MGP_WSBEiJ_T0063698.1 MGP_WSBEiJ_G0027314.1 mouse_genomes_project 4 16472088 16568851 - MGP_WSBEiJ_P0063698 Wwp1 protein_coding protein_coding MGP_WSBEiJ_T0063699.1 MGP_WSBEiJ_G0027314.1 mouse_genomes_project 4 16473458 16536612 - MGP_WSBEiJ_P0063699 Wwp1 protein_coding protein_coding MGP_WSBEiJ_T0064519.1 MGP_WSBEiJ_G0027488.1 mouse_genomes_project 4 46072049 46132031 + MGP_WSBEiJ_P0064519 Stx17 protein_coding protein_coding MGP_WSBEiJ_T0064520.1 MGP_WSBEiJ_G0027488.1 mouse_genomes_project 4 46072057 46107407 + MGP_WSBEiJ_P0064520 Stx17 protein_coding protein_coding MGP_WSBEiJ_T0064521.1 MGP_WSBEiJ_G0027488.1 mouse_genomes_project 4 46072060 46132627 + MGP_WSBEiJ_P0064521 Stx17 protein_coding protein_coding MGP_WSBEiJ_T0064522.1 MGP_WSBEiJ_G0027488.1 mouse_genomes_project 4 46072069 46128351 + MGP_WSBEiJ_P0064522 Stx17 protein_coding protein_coding MGP_WSBEiJ_T0067943.1 MGP_WSBEiJ_G0028278.1 mouse_genomes_project 4 145169518 145182081 - MGP_WSBEiJ_P0067943 Oog4 protein_coding protein_coding MGP_WSBEiJ_T0067944.1 MGP_WSBEiJ_G0028278.1 mouse_genomes_project 4 145169519 145182061 - MGP_WSBEiJ_P0067944 Oog4 protein_coding protein_coding MGP_WSBEiJ_T0014399.1 MGP_WSBEiJ_G0012529.1 mouse_genomes_project 4 151626906 151627282 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068482.1 MGP_WSBEiJ_G0028394.1 mouse_genomes_project 4 157366012 157383131 + MGP_WSBEiJ_P0068482 protein_coding protein_coding MGP_WSBEiJ_T0068483.1 MGP_WSBEiJ_G0028394.1 mouse_genomes_project 4 157376148 157377227 + protein_coding processed_transcript MGP_WSBEiJ_T0067713.1 MGP_WSBEiJ_G0028221.1 mouse_genomes_project 4 140686253 140702730 - MGP_WSBEiJ_P0067713 Pqlc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067714.1 MGP_WSBEiJ_G0028221.1 mouse_genomes_project 4 140690781 140702918 - MGP_WSBEiJ_P0067714 Pqlc2 protein_coding protein_coding MGP_WSBEiJ_T0067715.1 MGP_WSBEiJ_G0028221.1 mouse_genomes_project 4 140693577 140702877 - MGP_WSBEiJ_P0067715 Pqlc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063909.1 MGP_WSBEiJ_G0027363.1 mouse_genomes_project 4 32165754 32181194 + MGP_WSBEiJ_P0063909 Cga protein_coding protein_coding MGP_WSBEiJ_T0063910.1 MGP_WSBEiJ_G0027363.1 mouse_genomes_project 4 32165763 32180956 + MGP_WSBEiJ_P0063910 Cga protein_coding protein_coding MGP_WSBEiJ_T0063911.1 MGP_WSBEiJ_G0027363.1 mouse_genomes_project 4 32165763 32181002 + MGP_WSBEiJ_P0063911 Cga protein_coding protein_coding MGP_WSBEiJ_T0067820.1 MGP_WSBEiJ_G0028246.1 mouse_genomes_project 4 142662495 142691217 - Szrd1 protein_coding processed_transcript MGP_WSBEiJ_T0067821.1 MGP_WSBEiJ_G0028246.1 mouse_genomes_project 4 142662495 142691217 - Szrd1 protein_coding processed_transcript MGP_WSBEiJ_T0067822.1 MGP_WSBEiJ_G0028246.1 mouse_genomes_project 4 142662495 142691208 - MGP_WSBEiJ_P0067822 Szrd1 protein_coding protein_coding MGP_WSBEiJ_T0067823.1 MGP_WSBEiJ_G0028246.1 mouse_genomes_project 4 142662495 142691169 - MGP_WSBEiJ_P0067823 Szrd1 protein_coding protein_coding MGP_WSBEiJ_T0067824.1 MGP_WSBEiJ_G0028246.1 mouse_genomes_project 4 142666035 142691182 - Szrd1 protein_coding processed_transcript MGP_WSBEiJ_T0064145.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40704925 40807180 + Unc13b protein_coding retained_intron MGP_WSBEiJ_T0064146.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40704941 40907571 + MGP_WSBEiJ_P0064146 Unc13b protein_coding protein_coding MGP_WSBEiJ_T0064147.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40704948 40812533 + Unc13b protein_coding processed_transcript MGP_WSBEiJ_T0064148.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40704956 40809612 + Unc13b protein_coding retained_intron MGP_WSBEiJ_T0064149.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40705045 40906328 + MGP_WSBEiJ_P0064149 Unc13b protein_coding protein_coding MGP_WSBEiJ_T0064150.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40705045 40906328 + MGP_WSBEiJ_P0064150 Unc13b protein_coding protein_coding MGP_WSBEiJ_T0064151.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40705052 40906311 + MGP_WSBEiJ_P0064151 Unc13b protein_coding protein_coding MGP_WSBEiJ_T0064152.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40762084 40879365 + Unc13b protein_coding processed_transcript MGP_WSBEiJ_T0064153.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40819022 40874131 + Unc13b protein_coding processed_transcript MGP_WSBEiJ_T0064154.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40821625 40878683 + MGP_WSBEiJ_P0064154 Unc13b protein_coding protein_coding MGP_WSBEiJ_T0064155.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40850998 40907580 + MGP_WSBEiJ_P0064155 Unc13b protein_coding unknown_likely_coding MGP_WSBEiJ_T0064156.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40871696 40874546 + Unc13b protein_coding retained_intron MGP_WSBEiJ_T0064157.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40875395 40889013 + Unc13b protein_coding retained_intron MGP_WSBEiJ_T0064158.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40891746 40898844 + Unc13b protein_coding retained_intron MGP_WSBEiJ_T0064159.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40898122 40900999 + MGP_WSBEiJ_P0064159 Unc13b protein_coding protein_coding MGP_WSBEiJ_T0064160.1 MGP_WSBEiJ_G0027419.1 mouse_genomes_project 4 40899409 40904318 + Unc13b protein_coding retained_intron MGP_WSBEiJ_T0010475.1 MGP_WSBEiJ_G0008632.1 mouse_genomes_project 4 142211940 142212036 + Gm23045 miRNA miRNA MGP_WSBEiJ_T0066990.1 MGP_WSBEiJ_G0028061.1 mouse_genomes_project 4 131178948 131225384 + MGP_WSBEiJ_P0066990 Nkain1 protein_coding protein_coding MGP_WSBEiJ_T0066991.1 MGP_WSBEiJ_G0028061.1 mouse_genomes_project 4 131179155 131225400 + MGP_WSBEiJ_P0066991 Nkain1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066992.1 MGP_WSBEiJ_G0028061.1 mouse_genomes_project 4 131194980 131213845 + Nkain1 protein_coding processed_transcript MGP_WSBEiJ_T0064637.1 MGP_WSBEiJ_G0027525.1 mouse_genomes_project 4 54983792 54985100 + MGP_WSBEiJ_P0064637 Gm26657 protein_coding protein_coding MGP_WSBEiJ_T0067350.1 MGP_WSBEiJ_G0028135.1 mouse_genomes_project 4 135464828 135477569 + MGP_WSBEiJ_P0067350 Paqr7 protein_coding protein_coding MGP_WSBEiJ_T0067351.1 MGP_WSBEiJ_G0028135.1 mouse_genomes_project 4 135465106 135475962 + MGP_WSBEiJ_P0067351 Paqr7 protein_coding protein_coding MGP_WSBEiJ_T0067352.1 MGP_WSBEiJ_G0028135.1 mouse_genomes_project 4 135465106 135476293 + MGP_WSBEiJ_P0067352 Paqr7 protein_coding protein_coding MGP_WSBEiJ_T0067353.1 MGP_WSBEiJ_G0028135.1 mouse_genomes_project 4 135465112 135476022 + MGP_WSBEiJ_P0067353 Paqr7 protein_coding protein_coding MGP_WSBEiJ_T0067354.1 MGP_WSBEiJ_G0028135.1 mouse_genomes_project 4 135465135 135478953 + MGP_WSBEiJ_P0067354 Paqr7 protein_coding protein_coding MGP_WSBEiJ_T0067355.1 MGP_WSBEiJ_G0028135.1 mouse_genomes_project 4 135465172 135475742 + Paqr7 protein_coding processed_transcript MGP_WSBEiJ_T0064926.1 MGP_WSBEiJ_G0027602.1 mouse_genomes_project 4 72980841 73160186 + MGP_WSBEiJ_P0064926 Kdm4c protein_coding protein_coding MGP_WSBEiJ_T0064927.1 MGP_WSBEiJ_G0027602.1 mouse_genomes_project 4 72991985 73160186 + MGP_WSBEiJ_P0064927 Kdm4c protein_coding protein_coding MGP_WSBEiJ_T0064928.1 MGP_WSBEiJ_G0027602.1 mouse_genomes_project 4 73002681 73079214 + Kdm4c protein_coding processed_transcript MGP_WSBEiJ_T0064929.1 MGP_WSBEiJ_G0027602.1 mouse_genomes_project 4 73002681 73081913 + MGP_WSBEiJ_P0064929 Kdm4c protein_coding protein_coding MGP_WSBEiJ_T0064930.1 MGP_WSBEiJ_G0027602.1 mouse_genomes_project 4 73002682 73015575 + Kdm4c protein_coding processed_transcript MGP_WSBEiJ_T0064931.1 MGP_WSBEiJ_G0027602.1 mouse_genomes_project 4 73002682 73011596 + Kdm4c protein_coding processed_transcript MGP_WSBEiJ_T0067438.1 MGP_WSBEiJ_G0028153.1 mouse_genomes_project 4 136585103 136618104 - MGP_WSBEiJ_P0067438 Grhl3 protein_coding protein_coding MGP_WSBEiJ_T0067439.1 MGP_WSBEiJ_G0028153.1 mouse_genomes_project 4 136585874 136617898 - MGP_WSBEiJ_P0067439 Grhl3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064741.1 MGP_WSBEiJ_G0027552.1 mouse_genomes_project 4 57710973 57712257 - Susd1 protein_coding retained_intron MGP_WSBEiJ_T0064742.1 MGP_WSBEiJ_G0027552.1 mouse_genomes_project 4 57710973 57835198 - MGP_WSBEiJ_P0064742 Susd1 protein_coding protein_coding MGP_WSBEiJ_T0064743.1 MGP_WSBEiJ_G0027552.1 mouse_genomes_project 4 57711044 57835198 - MGP_WSBEiJ_P0064743 Susd1 protein_coding protein_coding MGP_WSBEiJ_T0064744.1 MGP_WSBEiJ_G0027552.1 mouse_genomes_project 4 57725510 57729272 - Susd1 protein_coding retained_intron MGP_WSBEiJ_T0064745.1 MGP_WSBEiJ_G0027552.1 mouse_genomes_project 4 57728206 57754095 - Susd1 protein_coding retained_intron MGP_WSBEiJ_T0063662.1 MGP_WSBEiJ_G0027299.1 mouse_genomes_project 4 11380861 11542276 - MGP_WSBEiJ_P0063662 Lrrc69 protein_coding protein_coding MGP_WSBEiJ_T0063663.1 MGP_WSBEiJ_G0027299.1 mouse_genomes_project 4 11408560 11502218 - Lrrc69 protein_coding processed_transcript MGP_WSBEiJ_T0063664.1 MGP_WSBEiJ_G0027299.1 mouse_genomes_project 4 11408560 11542268 - MGP_WSBEiJ_P0063664 Lrrc69 protein_coding protein_coding MGP_WSBEiJ_T0067533.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137672490 137725736 - MGP_WSBEiJ_P0067533 Kdm1a protein_coding protein_coding MGP_WSBEiJ_T0067534.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137672494 137725700 - MGP_WSBEiJ_P0067534 Kdm1a protein_coding protein_coding MGP_WSBEiJ_T0067535.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137672804 137725321 - MGP_WSBEiJ_P0067535 Kdm1a protein_coding protein_coding MGP_WSBEiJ_T0067536.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137672833 137674497 - Kdm1a protein_coding retained_intron MGP_WSBEiJ_T0067537.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137673828 137675127 - Kdm1a protein_coding retained_intron MGP_WSBEiJ_T0067538.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137675075 137677279 - Kdm1a protein_coding retained_intron MGP_WSBEiJ_T0067539.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137677161 137683258 - Kdm1a protein_coding retained_intron MGP_WSBEiJ_T0067540.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137677189 137690363 - MGP_WSBEiJ_P0067540 Kdm1a protein_coding protein_coding MGP_WSBEiJ_T0067541.1 MGP_WSBEiJ_G0028176.1 mouse_genomes_project 4 137680289 137699292 - MGP_WSBEiJ_P0067541 Kdm1a protein_coding protein_coding MGP_WSBEiJ_T0063774.1 MGP_WSBEiJ_G0027331.1 mouse_genomes_project 4 21760844 21768949 + MGP_WSBEiJ_P0063774 Ndufaf4 protein_coding protein_coding MGP_WSBEiJ_T0063775.1 MGP_WSBEiJ_G0027331.1 mouse_genomes_project 4 21760892 21767453 + Ndufaf4 protein_coding processed_transcript MGP_WSBEiJ_T0063776.1 MGP_WSBEiJ_G0027331.1 mouse_genomes_project 4 21760937 21767433 + MGP_WSBEiJ_P0063776 Ndufaf4 protein_coding protein_coding MGP_WSBEiJ_T0066502.1 MGP_WSBEiJ_G0027951.1 mouse_genomes_project 4 124027139 124043572 - MGP_WSBEiJ_P0066502 Akirin1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0066503.1 MGP_WSBEiJ_G0027951.1 mouse_genomes_project 4 124029597 124036170 - Akirin1 protein_coding processed_transcript MGP_WSBEiJ_T0066504.1 MGP_WSBEiJ_G0027951.1 mouse_genomes_project 4 124030723 124043669 - Akirin1 protein_coding processed_transcript MGP_WSBEiJ_T0068760.1 MGP_WSBEiJ_G0028448.1 mouse_genomes_project 4 158860694 158870984 - MGP_WSBEiJ_P0068760 Samd11 protein_coding protein_coding MGP_WSBEiJ_T0068761.1 MGP_WSBEiJ_G0028448.1 mouse_genomes_project 4 158861465 158871581 - MGP_WSBEiJ_P0068761 Samd11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0014053.1 MGP_WSBEiJ_G0012183.1 mouse_genomes_project 4 22221614 22222442 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004344.1 MGP_WSBEiJ_G0003786.1 mouse_genomes_project 4 6103362 6117737 - Gm11817 antisense antisense MGP_WSBEiJ_T0017517.1 MGP_WSBEiJ_G0015003.1 mouse_genomes_project 4 154711549 154712977 - Gm13645 processed_transcript processed_transcript MGP_WSBEiJ_T0068165.1 MGP_WSBEiJ_G0028338.1 mouse_genomes_project 4 151719949 151792219 + MGP_WSBEiJ_P0068165 Clstn1 protein_coding protein_coding MGP_WSBEiJ_T0068166.1 MGP_WSBEiJ_G0028338.1 mouse_genomes_project 4 151768802 151774335 + Clstn1 protein_coding retained_intron MGP_WSBEiJ_T0099534.1 MGP_WSBEiJ_G0038197.1 mouse_genomes_project 4 71850387 71850514 + Gm25769 snoRNA snoRNA MGP_WSBEiJ_T0065237.1 MGP_WSBEiJ_G0027673.1 mouse_genomes_project 4 95561091 95598136 - MGP_WSBEiJ_P0065237 Cyp2j7 protein_coding protein_coding MGP_WSBEiJ_T0065897.1 MGP_WSBEiJ_G0027813.1 mouse_genomes_project 4 115285568 115291024 + MGP_WSBEiJ_P0065897 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0065898.1 MGP_WSBEiJ_G0027813.1 mouse_genomes_project 4 115285735 115291024 + MGP_WSBEiJ_P0065898 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0004491.1 MGP_WSBEiJ_G0003900.1 mouse_genomes_project 4 142966099 142980198 + Gm13075 antisense antisense MGP_WSBEiJ_T0004492.1 MGP_WSBEiJ_G0003900.1 mouse_genomes_project 4 142966127 142981163 + Gm13075 antisense antisense MGP_WSBEiJ_T0063563.1 MGP_WSBEiJ_G0027277.1 mouse_genomes_project 4 7519508 7545915 + MGP_WSBEiJ_P0063563 2610301B20Rik protein_coding protein_coding MGP_WSBEiJ_T0063564.1 MGP_WSBEiJ_G0027277.1 mouse_genomes_project 4 7519535 7539965 + 2610301B20Rik protein_coding processed_transcript MGP_WSBEiJ_T0063565.1 MGP_WSBEiJ_G0027277.1 mouse_genomes_project 4 7519575 7544567 + 2610301B20Rik protein_coding processed_transcript MGP_WSBEiJ_T0063566.1 MGP_WSBEiJ_G0027277.1 mouse_genomes_project 4 7519578 7545919 + MGP_WSBEiJ_P0063566 2610301B20Rik protein_coding protein_coding MGP_WSBEiJ_T0063567.1 MGP_WSBEiJ_G0027277.1 mouse_genomes_project 4 7525303 7538448 + 2610301B20Rik protein_coding processed_transcript MGP_WSBEiJ_T0066192.1 MGP_WSBEiJ_G0027869.1 mouse_genomes_project 4 117844454 117850631 - Ipo13 protein_coding processed_transcript MGP_WSBEiJ_T0066193.1 MGP_WSBEiJ_G0027869.1 mouse_genomes_project 4 117844454 117864595 - MGP_WSBEiJ_P0066193 Ipo13 protein_coding protein_coding MGP_WSBEiJ_T0066194.1 MGP_WSBEiJ_G0027869.1 mouse_genomes_project 4 117844595 117845083 - Ipo13 protein_coding processed_transcript MGP_WSBEiJ_T0066195.1 MGP_WSBEiJ_G0027869.1 mouse_genomes_project 4 117844860 117845842 - Ipo13 protein_coding processed_transcript MGP_WSBEiJ_T0066196.1 MGP_WSBEiJ_G0027869.1 mouse_genomes_project 4 117845308 117845861 - Ipo13 protein_coding processed_transcript MGP_WSBEiJ_T0066197.1 MGP_WSBEiJ_G0027869.1 mouse_genomes_project 4 117850923 117853836 - Ipo13 protein_coding processed_transcript MGP_WSBEiJ_T0065024.1 MGP_WSBEiJ_G0027618.1 mouse_genomes_project 4 82544470 82882276 + MGP_WSBEiJ_P0065024 Ccdc171 protein_coding protein_coding MGP_WSBEiJ_T0065025.1 MGP_WSBEiJ_G0027618.1 mouse_genomes_project 4 82544522 82727937 + MGP_WSBEiJ_P0065025 Ccdc171 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065026.1 MGP_WSBEiJ_G0027618.1 mouse_genomes_project 4 82544539 82582235 + MGP_WSBEiJ_P0065026 Ccdc171 protein_coding protein_coding MGP_WSBEiJ_T0065027.1 MGP_WSBEiJ_G0027618.1 mouse_genomes_project 4 82544564 82882191 + MGP_WSBEiJ_P0065027 Ccdc171 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065028.1 MGP_WSBEiJ_G0027618.1 mouse_genomes_project 4 82719559 82811757 + Ccdc171 protein_coding processed_transcript MGP_WSBEiJ_T0010428.1 MGP_WSBEiJ_G0008585.1 mouse_genomes_project 4 79958568 79958664 + Gm27452 miRNA miRNA MGP_WSBEiJ_T0063501.1 MGP_WSBEiJ_G0027268.1 mouse_genomes_project 4 2978879 3011357 + MGP_WSBEiJ_P0063501 Sdcbp protein_coding protein_coding MGP_WSBEiJ_T0063502.1 MGP_WSBEiJ_G0027268.1 mouse_genomes_project 4 2978906 3010728 + MGP_WSBEiJ_P0063502 Sdcbp protein_coding protein_coding MGP_WSBEiJ_T0063503.1 MGP_WSBEiJ_G0027268.1 mouse_genomes_project 4 2978937 2987363 + Sdcbp protein_coding processed_transcript MGP_WSBEiJ_T0063504.1 MGP_WSBEiJ_G0027268.1 mouse_genomes_project 4 2978938 3008183 + MGP_WSBEiJ_P0063504 Sdcbp protein_coding protein_coding MGP_WSBEiJ_T0063505.1 MGP_WSBEiJ_G0027268.1 mouse_genomes_project 4 2978941 2998765 + Sdcbp protein_coding processed_transcript MGP_WSBEiJ_T0063506.1 MGP_WSBEiJ_G0027268.1 mouse_genomes_project 4 2978942 2999600 + MGP_WSBEiJ_P0063506 Sdcbp protein_coding protein_coding MGP_WSBEiJ_T0063507.1 MGP_WSBEiJ_G0027268.1 mouse_genomes_project 4 2978942 3023403 + MGP_WSBEiJ_P0063507 Sdcbp protein_coding protein_coding MGP_WSBEiJ_T0063508.1 MGP_WSBEiJ_G0027268.1 mouse_genomes_project 4 2990076 3008067 + MGP_WSBEiJ_P0063508 Sdcbp protein_coding protein_coding MGP_WSBEiJ_T0065152.1 MGP_WSBEiJ_G0027655.1 mouse_genomes_project 4 88961429 88974144 + Dmrta1 protein_coding processed_transcript MGP_WSBEiJ_T0065153.1 MGP_WSBEiJ_G0027655.1 mouse_genomes_project 4 88970159 88977001 + MGP_WSBEiJ_P0065153 Dmrta1 protein_coding protein_coding MGP_WSBEiJ_T0010423.1 MGP_WSBEiJ_G0008580.1 mouse_genomes_project 4 55146632 55146702 - Mir32 miRNA miRNA MGP_WSBEiJ_T0066510.1 MGP_WSBEiJ_G0027953.1 mouse_genomes_project 4 124167321 124170351 + MGP_WSBEiJ_P0066510 4933427I04Rik protein_coding protein_coding MGP_WSBEiJ_T0064230.1 MGP_WSBEiJ_G0027429.1 mouse_genomes_project 4 41167273 41177635 - Tpm2 protein_coding processed_transcript MGP_WSBEiJ_T0064231.1 MGP_WSBEiJ_G0027429.1 mouse_genomes_project 4 41167273 41177661 - MGP_WSBEiJ_P0064231 Tpm2 protein_coding protein_coding MGP_WSBEiJ_T0064232.1 MGP_WSBEiJ_G0027429.1 mouse_genomes_project 4 41167273 41177792 - MGP_WSBEiJ_P0064232 Tpm2 protein_coding protein_coding MGP_WSBEiJ_T0064233.1 MGP_WSBEiJ_G0027429.1 mouse_genomes_project 4 41167274 41177585 - MGP_WSBEiJ_P0064233 Tpm2 protein_coding protein_coding MGP_WSBEiJ_T0064234.1 MGP_WSBEiJ_G0027429.1 mouse_genomes_project 4 41168244 41173875 - Tpm2 protein_coding processed_transcript MGP_WSBEiJ_T0064235.1 MGP_WSBEiJ_G0027429.1 mouse_genomes_project 4 41173873 41177962 - MGP_WSBEiJ_P0064235 Tpm2 protein_coding protein_coding MGP_WSBEiJ_T0066716.1 MGP_WSBEiJ_G0028005.1 mouse_genomes_project 4 127858579 127861198 - MGP_WSBEiJ_P0066716 Gja4 protein_coding protein_coding MGP_WSBEiJ_T0064527.1 MGP_WSBEiJ_G0027490.1 mouse_genomes_project 4 46227386 46255632 + Invs protein_coding processed_transcript MGP_WSBEiJ_T0064528.1 MGP_WSBEiJ_G0027490.1 mouse_genomes_project 4 46227426 46228674 + Invs protein_coding processed_transcript MGP_WSBEiJ_T0064529.1 MGP_WSBEiJ_G0027490.1 mouse_genomes_project 4 46227428 46388895 + MGP_WSBEiJ_P0064529 Invs protein_coding protein_coding MGP_WSBEiJ_T0064530.1 MGP_WSBEiJ_G0027490.1 mouse_genomes_project 4 46227442 46234674 + Invs protein_coding processed_transcript MGP_WSBEiJ_T0064531.1 MGP_WSBEiJ_G0027490.1 mouse_genomes_project 4 46227452 46384293 + MGP_WSBEiJ_P0064531 Invs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064532.1 MGP_WSBEiJ_G0027490.1 mouse_genomes_project 4 46334852 46349468 + Invs protein_coding processed_transcript MGP_WSBEiJ_T0064575.1 MGP_WSBEiJ_G0027504.1 mouse_genomes_project 4 47686703 47882326 - MGP_WSBEiJ_P0064575 Grin3a protein_coding protein_coding MGP_WSBEiJ_T0064576.1 MGP_WSBEiJ_G0027504.1 mouse_genomes_project 4 47686703 47882326 - MGP_WSBEiJ_P0064576 Grin3a protein_coding protein_coding MGP_WSBEiJ_T0064578.1 MGP_WSBEiJ_G0027504.1 mouse_genomes_project 4 47735756 47754319 - Grin3a protein_coding processed_transcript MGP_WSBEiJ_T0064579.1 MGP_WSBEiJ_G0027504.1 mouse_genomes_project 4 47800828 47882521 - Grin3a protein_coding processed_transcript MGP_WSBEiJ_T0014288.1 MGP_WSBEiJ_G0012418.1 mouse_genomes_project 4 108584493 108585049 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010484.1 MGP_WSBEiJ_G0008641.1 mouse_genomes_project 4 158382030 158382156 + Gm27743 miRNA miRNA MGP_WSBEiJ_T0007705.1 MGP_WSBEiJ_G0006302.1 mouse_genomes_project 4 34320710 34356735 + Gm12371 lincRNA lincRNA MGP_WSBEiJ_T0014214.1 MGP_WSBEiJ_G0012344.1 mouse_genomes_project 4 82515366 82515629 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098250.1 MGP_WSBEiJ_G0036913.1 mouse_genomes_project 4 40842239 40842304 - Gm25010 snRNA snRNA MGP_WSBEiJ_T0017496.1 MGP_WSBEiJ_G0014996.1 mouse_genomes_project 4 125301151 125302742 + 9930104L06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017497.1 MGP_WSBEiJ_G0014996.1 mouse_genomes_project 4 125301161 125303558 + 9930104L06Rik processed_transcript retained_intron MGP_WSBEiJ_T0017498.1 MGP_WSBEiJ_G0014996.1 mouse_genomes_project 4 125301165 125308733 + 9930104L06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017499.1 MGP_WSBEiJ_G0014996.1 mouse_genomes_project 4 125301168 125310776 + 9930104L06Rik processed_transcript retained_intron MGP_WSBEiJ_T0017500.1 MGP_WSBEiJ_G0014996.1 mouse_genomes_project 4 125301177 125310777 + 9930104L06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017501.1 MGP_WSBEiJ_G0014996.1 mouse_genomes_project 4 125302881 125308882 + 9930104L06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017502.1 MGP_WSBEiJ_G0014996.1 mouse_genomes_project 4 125309253 125309987 + 9930104L06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0011360.1 MGP_WSBEiJ_G0009517.1 mouse_genomes_project 4 31698598 31698704 + Gm23466 misc_RNA misc_RNA MGP_WSBEiJ_T0014370.1 MGP_WSBEiJ_G0012500.1 mouse_genomes_project 4 136917536 136918032 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068537.1 MGP_WSBEiJ_G0028404.1 mouse_genomes_project 4 157693752 157732217 - Ski protein_coding processed_transcript MGP_WSBEiJ_T0068538.1 MGP_WSBEiJ_G0028404.1 mouse_genomes_project 4 157693752 157766307 - MGP_WSBEiJ_P0068538 Ski protein_coding protein_coding MGP_WSBEiJ_T0068539.1 MGP_WSBEiJ_G0028404.1 mouse_genomes_project 4 157693752 157766364 - MGP_WSBEiJ_P0068539 Ski protein_coding protein_coding MGP_WSBEiJ_T0066501.1 MGP_WSBEiJ_G0027950.1 mouse_genomes_project 4 124004685 124011585 - MGP_WSBEiJ_P0066501 Ndufs5 protein_coding protein_coding MGP_WSBEiJ_T0066515.1 MGP_WSBEiJ_G0027955.1 mouse_genomes_project 4 124219158 124239382 + MGP_WSBEiJ_P0066515 Rragc protein_coding protein_coding MGP_WSBEiJ_T0066516.1 MGP_WSBEiJ_G0027955.1 mouse_genomes_project 4 124219186 124239378 + MGP_WSBEiJ_P0066516 Rragc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066518.1 MGP_WSBEiJ_G0027955.1 mouse_genomes_project 4 124220794 124222699 + Rragc protein_coding processed_transcript MGP_WSBEiJ_T0066519.1 MGP_WSBEiJ_G0027955.1 mouse_genomes_project 4 124222614 124231668 + Rragc protein_coding retained_intron MGP_WSBEiJ_T0066520.1 MGP_WSBEiJ_G0027955.1 mouse_genomes_project 4 124222989 124237931 + Rragc protein_coding processed_transcript MGP_WSBEiJ_T0014363.1 MGP_WSBEiJ_G0012493.1 mouse_genomes_project 4 135287568 135287829 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017442.1 MGP_WSBEiJ_G0014958.1 mouse_genomes_project 4 21823400 21829219 - C230012O17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017443.1 MGP_WSBEiJ_G0014958.1 mouse_genomes_project 4 21824936 21829686 - C230012O17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017444.1 MGP_WSBEiJ_G0014958.1 mouse_genomes_project 4 21828974 21830052 - C230012O17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0098280.1 MGP_WSBEiJ_G0036943.1 mouse_genomes_project 4 108388396 108388503 - Gm22345 snRNA snRNA MGP_WSBEiJ_T0065377.1 MGP_WSBEiJ_G0027708.1 mouse_genomes_project 4 101395374 101398128 - MGP_WSBEiJ_P0065377 protein_coding protein_coding MGP_WSBEiJ_T0014089.1 MGP_WSBEiJ_G0012219.1 mouse_genomes_project 4 31721461 31721753 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065169.1 MGP_WSBEiJ_G0027658.1 mouse_genomes_project 4 91457421 91460314 - MGP_WSBEiJ_P0065169 Izumo3 protein_coding protein_coding MGP_WSBEiJ_T0065170.1 MGP_WSBEiJ_G0027658.1 mouse_genomes_project 4 91457430 91460327 - MGP_WSBEiJ_P0065170 Izumo3 protein_coding protein_coding MGP_WSBEiJ_T0065088.1 MGP_WSBEiJ_G0027627.1 mouse_genomes_project 4 85906416 85993659 + MGP_WSBEiJ_P0065088 Dennd4c protein_coding protein_coding MGP_WSBEiJ_T0065089.1 MGP_WSBEiJ_G0027627.1 mouse_genomes_project 4 85906416 86016875 + MGP_WSBEiJ_P0065089 Dennd4c protein_coding protein_coding MGP_WSBEiJ_T0065090.1 MGP_WSBEiJ_G0027627.1 mouse_genomes_project 4 85935384 86015327 + MGP_WSBEiJ_P0065090 Dennd4c protein_coding protein_coding MGP_WSBEiJ_T0065091.1 MGP_WSBEiJ_G0027627.1 mouse_genomes_project 4 85938957 85943006 + Dennd4c protein_coding processed_transcript MGP_WSBEiJ_T0064104.1 MGP_WSBEiJ_G0027414.1 mouse_genomes_project 4 40621611 40645929 - MGP_WSBEiJ_P0064104 Vcp protein_coding protein_coding MGP_WSBEiJ_T0064105.1 MGP_WSBEiJ_G0027414.1 mouse_genomes_project 4 40627756 40630576 - Vcp protein_coding processed_transcript MGP_WSBEiJ_T0064106.1 MGP_WSBEiJ_G0027414.1 mouse_genomes_project 4 40630918 40634008 - Vcp protein_coding processed_transcript MGP_WSBEiJ_T0064107.1 MGP_WSBEiJ_G0027414.1 mouse_genomes_project 4 40638483 40639507 - Vcp protein_coding processed_transcript MGP_WSBEiJ_T0064108.1 MGP_WSBEiJ_G0027414.1 mouse_genomes_project 4 40639460 40646184 - Vcp protein_coding processed_transcript MGP_WSBEiJ_T0099520.1 MGP_WSBEiJ_G0038183.1 mouse_genomes_project 4 52058589 52058714 + Gm23745 snoRNA snoRNA MGP_WSBEiJ_T0068500.1 MGP_WSBEiJ_G0028398.1 mouse_genomes_project 4 157481218 157482667 + MGP_WSBEiJ_P0068500 Hes5 protein_coding protein_coding MGP_WSBEiJ_T0068501.1 MGP_WSBEiJ_G0028398.1 mouse_genomes_project 4 157481266 157481702 + Hes5 protein_coding processed_transcript MGP_WSBEiJ_T0064109.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40648096 40656159 - Fancg protein_coding retained_intron MGP_WSBEiJ_T0064110.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40648096 40656026 - MGP_WSBEiJ_P0064110 Fancg protein_coding protein_coding MGP_WSBEiJ_T0064111.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40648675 40649686 - Fancg protein_coding retained_intron MGP_WSBEiJ_T0064112.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40648764 40652198 - Fancg protein_coding processed_transcript MGP_WSBEiJ_T0064113.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40649013 40652243 - Fancg protein_coding processed_transcript MGP_WSBEiJ_T0064114.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40649666 40652511 - Fancg protein_coding processed_transcript MGP_WSBEiJ_T0064115.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40650962 40654830 - Fancg protein_coding processed_transcript MGP_WSBEiJ_T0064116.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40654743 40655841 - Fancg protein_coding retained_intron MGP_WSBEiJ_T0064117.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40654834 40655893 - Fancg protein_coding retained_intron MGP_WSBEiJ_T0064118.1 MGP_WSBEiJ_G0027415.1 mouse_genomes_project 4 40655713 40656177 - Fancg protein_coding processed_transcript MGP_WSBEiJ_T0065683.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108304837 108411915 + MGP_WSBEiJ_P0065683 Zcchc11 protein_coding protein_coding MGP_WSBEiJ_T0065684.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108304837 108326520 + MGP_WSBEiJ_P0065684 Zcchc11 protein_coding protein_coding MGP_WSBEiJ_T0065685.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108305421 108411921 + MGP_WSBEiJ_P0065685 Zcchc11 protein_coding protein_coding MGP_WSBEiJ_T0065686.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108326447 108372746 + MGP_WSBEiJ_P0065686 Zcchc11 protein_coding protein_coding MGP_WSBEiJ_T0065687.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108375732 108380220 + Zcchc11 protein_coding processed_transcript MGP_WSBEiJ_T0065688.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108393165 108399183 + Zcchc11 protein_coding processed_transcript MGP_WSBEiJ_T0065689.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108393264 108394132 + Zcchc11 protein_coding processed_transcript MGP_WSBEiJ_T0065690.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108393317 108394125 + Zcchc11 protein_coding processed_transcript MGP_WSBEiJ_T0065691.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108401140 108406872 + Zcchc11 protein_coding processed_transcript MGP_WSBEiJ_T0065692.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108406888 108411915 + Zcchc11 protein_coding processed_transcript MGP_WSBEiJ_T0065693.1 MGP_WSBEiJ_G0027768.1 mouse_genomes_project 4 108407172 108411554 + MGP_WSBEiJ_P0065693 Zcchc11 protein_coding protein_coding MGP_WSBEiJ_T0010478.1 MGP_WSBEiJ_G0008635.1 mouse_genomes_project 4 144813698 144813761 - Mir7021 miRNA miRNA MGP_WSBEiJ_T0063947.1 MGP_WSBEiJ_G0027372.1 mouse_genomes_project 4 37716873 37727145 - MGP_WSBEiJ_P0063947 Topors protein_coding protein_coding MGP_WSBEiJ_T0064074.1 MGP_WSBEiJ_G0027405.1 mouse_genomes_project 4 39379240 39380360 - MGP_WSBEiJ_P0064074 protein_coding protein_coding MGP_WSBEiJ_T0007686.1 MGP_WSBEiJ_G0006284.1 mouse_genomes_project 4 9012015 9059375 + Gm11846 lincRNA lincRNA MGP_WSBEiJ_T0068754.1 MGP_WSBEiJ_G0028444.1 mouse_genomes_project 4 158828447 158833869 + MGP_WSBEiJ_P0068754 Perm1 protein_coding protein_coding MGP_WSBEiJ_T0068057.1 MGP_WSBEiJ_G0028319.1 mouse_genomes_project 4 150504606 150510956 + Mtor protein_coding retained_intron MGP_WSBEiJ_T0068058.1 MGP_WSBEiJ_G0028319.1 mouse_genomes_project 4 150504606 150620787 + MGP_WSBEiJ_P0068058 Mtor protein_coding protein_coding MGP_WSBEiJ_T0068059.1 MGP_WSBEiJ_G0028319.1 mouse_genomes_project 4 150504620 150510960 + MGP_WSBEiJ_P0068059 Mtor protein_coding protein_coding MGP_WSBEiJ_T0068061.1 MGP_WSBEiJ_G0028319.1 mouse_genomes_project 4 150607308 150610839 + Mtor protein_coding retained_intron MGP_WSBEiJ_T0067958.1 MGP_WSBEiJ_G0028289.1 mouse_genomes_project 4 146247087 146260532 - MGP_WSBEiJ_P0067958 Aadacl3 protein_coding protein_coding MGP_WSBEiJ_T0065175.1 MGP_WSBEiJ_G0027662.1 mouse_genomes_project 4 93928600 93937506 - Plaa protein_coding processed_transcript MGP_WSBEiJ_T0065176.1 MGP_WSBEiJ_G0027662.1 mouse_genomes_project 4 93930253 93968418 - MGP_WSBEiJ_P0065176 Plaa protein_coding protein_coding MGP_WSBEiJ_T0065177.1 MGP_WSBEiJ_G0027662.1 mouse_genomes_project 4 93932774 93947873 - MGP_WSBEiJ_P0065177 Plaa protein_coding protein_coding MGP_WSBEiJ_T0065178.1 MGP_WSBEiJ_G0027662.1 mouse_genomes_project 4 93934980 93947852 - Plaa protein_coding processed_transcript MGP_WSBEiJ_T0065179.1 MGP_WSBEiJ_G0027662.1 mouse_genomes_project 4 93951451 93968309 - Plaa protein_coding processed_transcript MGP_WSBEiJ_T0065180.1 MGP_WSBEiJ_G0027662.1 mouse_genomes_project 4 93955383 93968355 - Plaa protein_coding processed_transcript MGP_WSBEiJ_T0004477.1 MGP_WSBEiJ_G0003888.1 mouse_genomes_project 4 137096737 137097143 - Gm24362 antisense antisense MGP_WSBEiJ_T0064343.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42240012 42433438 - MGP_WSBEiJ_P0064343 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064344.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246400 42433369 - MGP_WSBEiJ_P0064344 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064345.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246400 42433369 - MGP_WSBEiJ_P0064345 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064346.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246400 42433369 - MGP_WSBEiJ_P0064346 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064347.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246400 42433369 - MGP_WSBEiJ_P0064347 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064348.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246400 42433369 - MGP_WSBEiJ_P0064348 Pax5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064349.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246752 42433359 - MGP_WSBEiJ_P0064349 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064350.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246752 42433359 - MGP_WSBEiJ_P0064350 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064351.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246752 42433359 - MGP_WSBEiJ_P0064351 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064352.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246752 42433359 - MGP_WSBEiJ_P0064352 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064353.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246752 42433359 - MGP_WSBEiJ_P0064353 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064354.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246752 42433359 - MGP_WSBEiJ_P0064354 Pax5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064355.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246752 42433359 - MGP_WSBEiJ_P0064355 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064356.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42246759 42367652 - MGP_WSBEiJ_P0064356 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064357.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42288391 42406766 - Pax5 protein_coding processed_transcript MGP_WSBEiJ_T0064358.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42402389 42426963 - MGP_WSBEiJ_P0064358 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0064359.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42402403 42426370 - Pax5 protein_coding processed_transcript MGP_WSBEiJ_T0064360.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42402403 42426370 - Pax5 protein_coding processed_transcript MGP_WSBEiJ_T0064361.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42402403 42426370 - Pax5 protein_coding processed_transcript MGP_WSBEiJ_T0064362.1 MGP_WSBEiJ_G0027451.1 mouse_genomes_project 4 42402403 42426370 - MGP_WSBEiJ_P0064362 Pax5 protein_coding protein_coding MGP_WSBEiJ_T0007856.1 MGP_WSBEiJ_G0006419.1 mouse_genomes_project 4 132346490 132372862 - Gm12962 lincRNA lincRNA MGP_WSBEiJ_T0007857.1 MGP_WSBEiJ_G0006419.1 mouse_genomes_project 4 132346818 132378576 - Gm12962 lincRNA lincRNA MGP_WSBEiJ_T0007744.1 MGP_WSBEiJ_G0006334.1 mouse_genomes_project 4 61198062 61214861 + Gm11210 lincRNA lincRNA MGP_WSBEiJ_T0014021.1 MGP_WSBEiJ_G0012151.1 mouse_genomes_project 4 12264411 12264828 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099539.1 MGP_WSBEiJ_G0038202.1 mouse_genomes_project 4 80326279 80326410 - Gm25803 snoRNA snoRNA MGP_WSBEiJ_T0064603.1 MGP_WSBEiJ_G0027515.1 mouse_genomes_project 4 51148376 51277718 - MGP_WSBEiJ_P0064603 Abca1 protein_coding protein_coding MGP_WSBEiJ_T0064604.1 MGP_WSBEiJ_G0027515.1 mouse_genomes_project 4 51153077 51158502 - Abca1 protein_coding processed_transcript MGP_WSBEiJ_T0004544.1 MGP_WSBEiJ_G0003937.1 mouse_genomes_project 4 158621873 158623690 - Gm16008 antisense antisense MGP_WSBEiJ_T0004545.1 MGP_WSBEiJ_G0003937.1 mouse_genomes_project 4 158623592 158631478 - Gm16008 antisense antisense MGP_WSBEiJ_T0004546.1 MGP_WSBEiJ_G0003937.1 mouse_genomes_project 4 158626107 158631457 - Gm16008 antisense antisense MGP_WSBEiJ_T0007781.1 MGP_WSBEiJ_G0006367.1 mouse_genomes_project 4 99163007 99164404 - Gm12688 lincRNA lincRNA MGP_WSBEiJ_T0066957.1 MGP_WSBEiJ_G0028052.1 mouse_genomes_project 4 130856599 130882540 + MGP_WSBEiJ_P0066957 Pef1 protein_coding protein_coding MGP_WSBEiJ_T0066958.1 MGP_WSBEiJ_G0028052.1 mouse_genomes_project 4 130861633 130882539 + MGP_WSBEiJ_P0066958 Pef1 protein_coding protein_coding MGP_WSBEiJ_T0068062.1 MGP_WSBEiJ_G0028321.1 mouse_genomes_project 4 150621531 150645400 + MGP_WSBEiJ_P0068062 Exosc10 protein_coding protein_coding MGP_WSBEiJ_T0068063.1 MGP_WSBEiJ_G0028321.1 mouse_genomes_project 4 150621533 150645389 + Exosc10 protein_coding processed_transcript MGP_WSBEiJ_T0068064.1 MGP_WSBEiJ_G0028321.1 mouse_genomes_project 4 150621557 150645392 + MGP_WSBEiJ_P0068064 Exosc10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068065.1 MGP_WSBEiJ_G0028321.1 mouse_genomes_project 4 150621564 150645400 + MGP_WSBEiJ_P0068065 Exosc10 protein_coding protein_coding MGP_WSBEiJ_T0068066.1 MGP_WSBEiJ_G0028321.1 mouse_genomes_project 4 150625978 150627069 + MGP_WSBEiJ_P0068066 Exosc10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068067.1 MGP_WSBEiJ_G0028321.1 mouse_genomes_project 4 150629253 150639566 + Exosc10 protein_coding retained_intron MGP_WSBEiJ_T0068068.1 MGP_WSBEiJ_G0028321.1 mouse_genomes_project 4 150631312 150639456 + Exosc10 protein_coding retained_intron MGP_WSBEiJ_T0068069.1 MGP_WSBEiJ_G0028321.1 mouse_genomes_project 4 150639119 150645320 + Exosc10 protein_coding processed_transcript MGP_WSBEiJ_T0063692.1 MGP_WSBEiJ_G0027311.1 mouse_genomes_project 4 16382177 16433081 - MGP_WSBEiJ_P0063692 Cpne3 protein_coding protein_coding MGP_WSBEiJ_T0063693.1 MGP_WSBEiJ_G0027311.1 mouse_genomes_project 4 16403536 16406603 - Cpne3 protein_coding processed_transcript MGP_WSBEiJ_T0063694.1 MGP_WSBEiJ_G0027311.1 mouse_genomes_project 4 16410253 16433056 - Cpne3 protein_coding retained_intron MGP_WSBEiJ_T0065114.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87335560 87364203 + Focad protein_coding retained_intron MGP_WSBEiJ_T0065115.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87335561 87648818 + MGP_WSBEiJ_P0065115 Focad protein_coding protein_coding MGP_WSBEiJ_T0065116.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87335576 87428027 + Focad protein_coding retained_intron MGP_WSBEiJ_T0065117.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87363689 87648816 + MGP_WSBEiJ_P0065117 Focad protein_coding protein_coding MGP_WSBEiJ_T0065118.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87366826 87397203 + Focad protein_coding retained_intron MGP_WSBEiJ_T0065119.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87544858 87568035 + Focad protein_coding retained_intron MGP_WSBEiJ_T0065120.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87590738 87648821 + Focad protein_coding retained_intron MGP_WSBEiJ_T0065122.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87637347 87645031 + Focad protein_coding processed_transcript MGP_WSBEiJ_T0065123.1 MGP_WSBEiJ_G0027632.1 mouse_genomes_project 4 87637562 87648823 + MGP_WSBEiJ_P0065123 Focad protein_coding protein_coding MGP_WSBEiJ_T0063865.1 MGP_WSBEiJ_G0027354.1 mouse_genomes_project 4 31278337 31300763 - MGP_WSBEiJ_P0063865 Spaca1 protein_coding protein_coding MGP_WSBEiJ_T0063866.1 MGP_WSBEiJ_G0027354.1 mouse_genomes_project 4 31278339 31291129 - MGP_WSBEiJ_P0063866 Spaca1 protein_coding protein_coding MGP_WSBEiJ_T0063867.1 MGP_WSBEiJ_G0027354.1 mouse_genomes_project 4 31281777 31300915 - MGP_WSBEiJ_P0063867 Spaca1 protein_coding protein_coding MGP_WSBEiJ_T0014144.1 MGP_WSBEiJ_G0012274.1 mouse_genomes_project 4 52998751 53000335 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004352.1 MGP_WSBEiJ_G0003792.1 mouse_genomes_project 4 16833353 16839137 - 4930480G23Rik antisense antisense MGP_WSBEiJ_T0098304.1 MGP_WSBEiJ_G0036967.1 mouse_genomes_project 4 134793504 134793604 - Gm22523 snRNA snRNA MGP_WSBEiJ_T0065505.1 MGP_WSBEiJ_G0027740.1 mouse_genomes_project 4 106490175 106550218 - MGP_WSBEiJ_P0065505 Acot11 protein_coding protein_coding MGP_WSBEiJ_T0065506.1 MGP_WSBEiJ_G0027740.1 mouse_genomes_project 4 106492855 106555382 - MGP_WSBEiJ_P0065506 Acot11 protein_coding protein_coding MGP_WSBEiJ_T0065507.1 MGP_WSBEiJ_G0027740.1 mouse_genomes_project 4 106493011 106519212 - MGP_WSBEiJ_P0065507 Acot11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065508.1 MGP_WSBEiJ_G0027740.1 mouse_genomes_project 4 106499334 106501581 - Acot11 protein_coding processed_transcript MGP_WSBEiJ_T0065509.1 MGP_WSBEiJ_G0027740.1 mouse_genomes_project 4 106507812 106550215 - MGP_WSBEiJ_P0065509 Acot11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065510.1 MGP_WSBEiJ_G0027740.1 mouse_genomes_project 4 106509220 106550162 - MGP_WSBEiJ_P0065510 Acot11 protein_coding protein_coding MGP_WSBEiJ_T0065511.1 MGP_WSBEiJ_G0027740.1 mouse_genomes_project 4 106509263 106550621 - MGP_WSBEiJ_P0065511 Acot11 protein_coding protein_coding MGP_WSBEiJ_T0007745.1 MGP_WSBEiJ_G0006335.1 mouse_genomes_project 4 61212639 61216659 - Gm11211 lincRNA lincRNA MGP_WSBEiJ_T0014076.1 MGP_WSBEiJ_G0012206.1 mouse_genomes_project 4 28509645 28510120 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007826.1 MGP_WSBEiJ_G0006400.1 mouse_genomes_project 4 125620703 125634112 + 1700041M05Rik lincRNA lincRNA MGP_WSBEiJ_T0100841.1 MGP_WSBEiJ_G0039299.1 mouse_genomes_project 4 122877333 122893748 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0063683.1 MGP_WSBEiJ_G0027307.1 mouse_genomes_project 4 12912409 12954484 - MGP_WSBEiJ_P0063683 Ripk2 protein_coding protein_coding MGP_WSBEiJ_T0063684.1 MGP_WSBEiJ_G0027307.1 mouse_genomes_project 4 12912417 12954480 - MGP_WSBEiJ_P0063684 Ripk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064621.1 MGP_WSBEiJ_G0027520.1 mouse_genomes_project 4 51971348 52012500 + MGP_WSBEiJ_P0064621 Tmem38b protein_coding protein_coding MGP_WSBEiJ_T0064622.1 MGP_WSBEiJ_G0027520.1 mouse_genomes_project 4 51971358 51981530 + Tmem38b protein_coding processed_transcript MGP_WSBEiJ_T0064623.1 MGP_WSBEiJ_G0027520.1 mouse_genomes_project 4 51971360 51997451 + Tmem38b protein_coding processed_transcript MGP_WSBEiJ_T0064624.1 MGP_WSBEiJ_G0027520.1 mouse_genomes_project 4 51989901 52005081 + MGP_WSBEiJ_P0064624 Tmem38b protein_coding protein_coding MGP_WSBEiJ_T0064850.1 MGP_WSBEiJ_G0027579.1 mouse_genomes_project 4 61859383 61864471 + MGP_WSBEiJ_P0064850 Orm1 protein_coding protein_coding MGP_WSBEiJ_T0064851.1 MGP_WSBEiJ_G0027579.1 mouse_genomes_project 4 61859421 61864469 + MGP_WSBEiJ_P0064851 Orm1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064645.1 MGP_WSBEiJ_G0027528.1 mouse_genomes_project 4 55050146 55052427 + Fam206a protein_coding retained_intron MGP_WSBEiJ_T0064646.1 MGP_WSBEiJ_G0027528.1 mouse_genomes_project 4 55050150 55057403 + MGP_WSBEiJ_P0064646 Fam206a protein_coding protein_coding MGP_WSBEiJ_T0064647.1 MGP_WSBEiJ_G0027528.1 mouse_genomes_project 4 55050153 55057403 + MGP_WSBEiJ_P0064647 Fam206a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064648.1 MGP_WSBEiJ_G0027528.1 mouse_genomes_project 4 55050419 55053749 + MGP_WSBEiJ_P0064648 Fam206a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063665.1 MGP_WSBEiJ_G0027300.1 mouse_genomes_project 4 11620316 11676108 + MGP_WSBEiJ_P0063665 Tmem55a protein_coding protein_coding MGP_WSBEiJ_T0063979.1 MGP_WSBEiJ_G0027381.1 mouse_genomes_project 4 38417410 38434076 + MGP_WSBEiJ_P0063979 Chmp5 protein_coding protein_coding MGP_WSBEiJ_T0007894.1 MGP_WSBEiJ_G0006451.1 mouse_genomes_project 4 150785171 150788054 + Gm13203 lincRNA lincRNA MGP_WSBEiJ_T0067424.1 MGP_WSBEiJ_G0028150.1 mouse_genomes_project 4 136454812 136477389 - MGP_WSBEiJ_P0067424 Rcan3 protein_coding protein_coding MGP_WSBEiJ_T0067425.1 MGP_WSBEiJ_G0028150.1 mouse_genomes_project 4 136454812 136468804 - MGP_WSBEiJ_P0067425 Rcan3 protein_coding protein_coding MGP_WSBEiJ_T0067426.1 MGP_WSBEiJ_G0028150.1 mouse_genomes_project 4 136460948 136477359 - MGP_WSBEiJ_P0067426 Rcan3 protein_coding protein_coding MGP_WSBEiJ_T0099498.1 MGP_WSBEiJ_G0038161.1 mouse_genomes_project 4 4446336 4446468 + Gm23860 snoRNA snoRNA MGP_WSBEiJ_T0014154.1 MGP_WSBEiJ_G0012284.1 mouse_genomes_project 4 55700228 55700714 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014343.1 MGP_WSBEiJ_G0012473.1 mouse_genomes_project 4 125071086 125071725 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066268.1 MGP_WSBEiJ_G0027890.1 mouse_genomes_project 4 118753790 118754732 - MGP_WSBEiJ_P0066268 Olfr1338 protein_coding protein_coding MGP_WSBEiJ_T0063813.1 MGP_WSBEiJ_G0027340.1 mouse_genomes_project 4 29761785 29763898 - MGP_WSBEiJ_P0063813 Gja10 protein_coding protein_coding MGP_WSBEiJ_T0066485.1 MGP_WSBEiJ_G0027948.1 mouse_genomes_project 4 123578069 123579634 - MGP_WSBEiJ_P0066485 Oxct2b protein_coding protein_coding MGP_WSBEiJ_T0014359.1 MGP_WSBEiJ_G0012489.1 mouse_genomes_project 4 133695097 133696961 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014158.1 MGP_WSBEiJ_G0012288.1 mouse_genomes_project 4 57470207 57470952 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100822.1 MGP_WSBEiJ_G0039280.1 mouse_genomes_project 4 95536286 95536465 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099556.1 MGP_WSBEiJ_G0038219.1 mouse_genomes_project 4 119009715 119009840 + Gm24352 snoRNA snoRNA MGP_WSBEiJ_T0007677.1 MGP_WSBEiJ_G0006279.1 mouse_genomes_project 4 7123776 7379840 - lincRNA lincRNA MGP_WSBEiJ_T0007678.1 MGP_WSBEiJ_G0006279.1 mouse_genomes_project 4 7141382 7439401 - lincRNA lincRNA MGP_WSBEiJ_T0007679.1 MGP_WSBEiJ_G0006279.1 mouse_genomes_project 4 7382657 7439385 - lincRNA lincRNA MGP_WSBEiJ_T0007680.1 MGP_WSBEiJ_G0006279.1 mouse_genomes_project 4 7382933 7439388 - lincRNA lincRNA MGP_WSBEiJ_T0065126.1 MGP_WSBEiJ_G0027634.1 mouse_genomes_project 4 87762498 87763248 - MGP_WSBEiJ_P0065126 Ifnb1 protein_coding protein_coding MGP_WSBEiJ_T0007794.1 MGP_WSBEiJ_G0006377.1 mouse_genomes_project 4 106020848 106021835 + Gm12730 lincRNA lincRNA MGP_WSBEiJ_T0010485.1 MGP_WSBEiJ_G0008642.1 mouse_genomes_project 4 158658465 158658548 - Mir429 miRNA miRNA MGP_WSBEiJ_T0004411.1 MGP_WSBEiJ_G0003836.1 mouse_genomes_project 4 102567397 102592783 - Gm12709 antisense antisense MGP_WSBEiJ_T0064405.1 MGP_WSBEiJ_G0027460.1 mouse_genomes_project 4 43116790 43154931 + MGP_WSBEiJ_P0064405 Dcaf10 protein_coding protein_coding MGP_WSBEiJ_T0064406.1 MGP_WSBEiJ_G0027460.1 mouse_genomes_project 4 43116809 43145647 + Dcaf10 protein_coding processed_transcript MGP_WSBEiJ_T0064407.1 MGP_WSBEiJ_G0027460.1 mouse_genomes_project 4 43116871 43150122 + Dcaf10 protein_coding processed_transcript MGP_WSBEiJ_T0064408.1 MGP_WSBEiJ_G0027460.1 mouse_genomes_project 4 43145513 43150833 + MGP_WSBEiJ_P0064408 Dcaf10 protein_coding protein_coding MGP_WSBEiJ_T0007771.1 MGP_WSBEiJ_G0006358.1 mouse_genomes_project 4 91253852 91254951 - 4930577H14Rik lincRNA lincRNA MGP_WSBEiJ_T0068624.1 MGP_WSBEiJ_G0028418.1 mouse_genomes_project 4 158318154 158323416 + MGP_WSBEiJ_P0068624 Tmem240 protein_coding protein_coding MGP_WSBEiJ_T0068625.1 MGP_WSBEiJ_G0028418.1 mouse_genomes_project 4 158318158 158323838 + Tmem240 protein_coding retained_intron MGP_WSBEiJ_T0068626.1 MGP_WSBEiJ_G0028418.1 mouse_genomes_project 4 158318228 158323838 + MGP_WSBEiJ_P0068626 Tmem240 protein_coding protein_coding MGP_WSBEiJ_T0004392.1 MGP_WSBEiJ_G0003827.1 mouse_genomes_project 4 87275894 87277395 + Gm12631 antisense antisense MGP_WSBEiJ_T0066019.1 MGP_WSBEiJ_G0027838.1 mouse_genomes_project 4 116466704 116493922 - MGP_WSBEiJ_P0066019 Nasp protein_coding protein_coding MGP_WSBEiJ_T0066020.1 MGP_WSBEiJ_G0027838.1 mouse_genomes_project 4 116467261 116494366 - MGP_WSBEiJ_P0066020 Nasp protein_coding protein_coding MGP_WSBEiJ_T0066021.1 MGP_WSBEiJ_G0027838.1 mouse_genomes_project 4 116467261 116493903 - MGP_WSBEiJ_P0066021 Nasp protein_coding protein_coding MGP_WSBEiJ_T0066022.1 MGP_WSBEiJ_G0027838.1 mouse_genomes_project 4 116468378 116471901 - Nasp protein_coding processed_transcript MGP_WSBEiJ_T0066023.1 MGP_WSBEiJ_G0027838.1 mouse_genomes_project 4 116468444 116470578 - Nasp protein_coding processed_transcript MGP_WSBEiJ_T0066024.1 MGP_WSBEiJ_G0027838.1 mouse_genomes_project 4 116477118 116493918 - Nasp protein_coding processed_transcript MGP_WSBEiJ_T0066025.1 MGP_WSBEiJ_G0027838.1 mouse_genomes_project 4 116482645 116490340 - Nasp protein_coding processed_transcript MGP_WSBEiJ_T0066026.1 MGP_WSBEiJ_G0027838.1 mouse_genomes_project 4 116484247 116493873 - Nasp protein_coding processed_transcript MGP_WSBEiJ_T0064303.1 MGP_WSBEiJ_G0027445.1 mouse_genomes_project 4 41639714 41664544 + MGP_WSBEiJ_P0064303 Glipr2 protein_coding protein_coding MGP_WSBEiJ_T0064304.1 MGP_WSBEiJ_G0027445.1 mouse_genomes_project 4 41640005 41664544 + MGP_WSBEiJ_P0064304 Glipr2 protein_coding protein_coding MGP_WSBEiJ_T0098234.1 MGP_WSBEiJ_G0036897.1 mouse_genomes_project 4 7959967 7960122 - Gm22940 snRNA snRNA MGP_WSBEiJ_T0010480.1 MGP_WSBEiJ_G0008637.1 mouse_genomes_project 4 151664556 151664616 + Mir5616 miRNA miRNA MGP_WSBEiJ_T0004523.1 MGP_WSBEiJ_G0003922.1 mouse_genomes_project 4 152773034 152774613 - Gm13091 antisense antisense MGP_WSBEiJ_T0097051.1 MGP_WSBEiJ_G0035732.1 mouse_genomes_project 4 46744200 46744312 - Gm24573 rRNA rRNA MGP_WSBEiJ_T0066959.1 MGP_WSBEiJ_G0028053.1 mouse_genomes_project 4 130884621 130893560 - MGP_WSBEiJ_P0066959 Hcrtr1 protein_coding protein_coding MGP_WSBEiJ_T0066960.1 MGP_WSBEiJ_G0028053.1 mouse_genomes_project 4 130884621 130892949 - MGP_WSBEiJ_P0066960 Hcrtr1 protein_coding protein_coding MGP_WSBEiJ_T0066961.1 MGP_WSBEiJ_G0028053.1 mouse_genomes_project 4 130884621 130893757 - MGP_WSBEiJ_P0066961 Hcrtr1 protein_coding protein_coding MGP_WSBEiJ_T0066962.1 MGP_WSBEiJ_G0028053.1 mouse_genomes_project 4 130885245 130892022 - MGP_WSBEiJ_P0066962 Hcrtr1 protein_coding protein_coding MGP_WSBEiJ_T0010427.1 MGP_WSBEiJ_G0008584.1 mouse_genomes_project 4 75804069 75804146 - Gm23159 miRNA miRNA MGP_WSBEiJ_T0065853.1 MGP_WSBEiJ_G0027796.1 mouse_genomes_project 4 111978955 111999985 + MGP_WSBEiJ_P0065853 Skint1 protein_coding protein_coding MGP_WSBEiJ_T0065854.1 MGP_WSBEiJ_G0027796.1 mouse_genomes_project 4 111978955 112003852 + MGP_WSBEiJ_P0065854 Skint1 protein_coding protein_coding MGP_WSBEiJ_T0065855.1 MGP_WSBEiJ_G0027796.1 mouse_genomes_project 4 111978955 111991995 + MGP_WSBEiJ_P0065855 Skint1 protein_coding protein_coding MGP_WSBEiJ_T0065856.1 MGP_WSBEiJ_G0027796.1 mouse_genomes_project 4 111978955 111999985 + MGP_WSBEiJ_P0065856 Skint1 protein_coding protein_coding MGP_WSBEiJ_T0065857.1 MGP_WSBEiJ_G0027796.1 mouse_genomes_project 4 111978968 111985014 + Skint1 protein_coding retained_intron MGP_WSBEiJ_T0010479.1 MGP_WSBEiJ_G0008636.1 mouse_genomes_project 4 150168778 150168839 - Mir7022 miRNA miRNA MGP_WSBEiJ_T0014243.1 MGP_WSBEiJ_G0012373.1 mouse_genomes_project 4 93745160 93745748 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014101.1 MGP_WSBEiJ_G0012231.1 mouse_genomes_project 4 36730913 36731673 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064649.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55058736 55115689 - MGP_WSBEiJ_P0064649 Ctnnal1 protein_coding protein_coding MGP_WSBEiJ_T0064650.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55059941 55062120 - Ctnnal1 protein_coding processed_transcript MGP_WSBEiJ_T0064651.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55064789 55065457 - Ctnnal1 protein_coding processed_transcript MGP_WSBEiJ_T0064652.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55071848 55089336 - Ctnnal1 protein_coding processed_transcript MGP_WSBEiJ_T0064653.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55073793 55115669 - Ctnnal1 protein_coding processed_transcript MGP_WSBEiJ_T0064654.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55074056 55078799 - Ctnnal1 protein_coding processed_transcript MGP_WSBEiJ_T0064655.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55078470 55088253 - Ctnnal1 protein_coding processed_transcript MGP_WSBEiJ_T0064656.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55090389 55115655 - MGP_WSBEiJ_P0064656 Ctnnal1 protein_coding protein_coding MGP_WSBEiJ_T0064657.1 MGP_WSBEiJ_G0027529.1 mouse_genomes_project 4 55094110 55095667 - Ctnnal1 protein_coding processed_transcript MGP_WSBEiJ_T0065244.1 MGP_WSBEiJ_G0027679.1 mouse_genomes_project 4 96070726 96134823 - MGP_WSBEiJ_P0065244 Gm12695 protein_coding protein_coding MGP_WSBEiJ_T0066709.1 MGP_WSBEiJ_G0028002.1 mouse_genomes_project 4 127660624 127666578 + MGP_WSBEiJ_P0066709 Tmem35b protein_coding protein_coding MGP_WSBEiJ_T0066710.1 MGP_WSBEiJ_G0028002.1 mouse_genomes_project 4 127662979 127666578 + MGP_WSBEiJ_P0066710 Tmem35b protein_coding protein_coding MGP_WSBEiJ_T0017432.1 MGP_WSBEiJ_G0014954.1 mouse_genomes_project 4 6419755 6468028 + 4930412C18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017433.1 MGP_WSBEiJ_G0014954.1 mouse_genomes_project 4 6419755 6469488 + 4930412C18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017434.1 MGP_WSBEiJ_G0014954.1 mouse_genomes_project 4 6419821 6426128 + 4930412C18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017435.1 MGP_WSBEiJ_G0014954.1 mouse_genomes_project 4 6419849 6430272 + 4930412C18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017436.1 MGP_WSBEiJ_G0014954.1 mouse_genomes_project 4 6419967 6466363 + 4930412C18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0064312.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41719887 41774631 - MGP_WSBEiJ_P0064312 Gne protein_coding protein_coding MGP_WSBEiJ_T0064313.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41723432 41742210 - MGP_WSBEiJ_P0064313 Gne protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064314.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41723448 41760491 - MGP_WSBEiJ_P0064314 Gne protein_coding protein_coding MGP_WSBEiJ_T0064315.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41723452 41753337 - MGP_WSBEiJ_P0064315 Gne protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064316.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41723580 41753377 - MGP_WSBEiJ_P0064316 Gne protein_coding protein_coding MGP_WSBEiJ_T0064317.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41732814 41760337 - MGP_WSBEiJ_P0064317 Gne protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064318.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41739785 41753478 - MGP_WSBEiJ_P0064318 Gne protein_coding protein_coding MGP_WSBEiJ_T0064319.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41742217 41749981 - Gne protein_coding retained_intron MGP_WSBEiJ_T0064320.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41746496 41774621 - Gne protein_coding retained_intron MGP_WSBEiJ_T0064321.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41746664 41774378 - MGP_WSBEiJ_P0064321 Gne protein_coding protein_coding MGP_WSBEiJ_T0064322.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41746768 41760449 - Gne protein_coding processed_transcript MGP_WSBEiJ_T0064323.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41746787 41760315 - MGP_WSBEiJ_P0064323 Gne protein_coding protein_coding MGP_WSBEiJ_T0064324.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41746899 41760730 - MGP_WSBEiJ_P0064324 Gne protein_coding protein_coding MGP_WSBEiJ_T0064325.1 MGP_WSBEiJ_G0027448.1 mouse_genomes_project 4 41746908 41760731 - MGP_WSBEiJ_P0064325 Gne protein_coding protein_coding MGP_WSBEiJ_T0098247.1 MGP_WSBEiJ_G0036910.1 mouse_genomes_project 4 38683603 38683706 - Gm24650 snRNA snRNA MGP_WSBEiJ_T0014300.1 MGP_WSBEiJ_G0012430.1 mouse_genomes_project 4 115162893 115163245 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100821.1 MGP_WSBEiJ_G0039279.1 mouse_genomes_project 4 95527560 95527766 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014239.1 MGP_WSBEiJ_G0012369.1 mouse_genomes_project 4 92438692 92441619 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014401.1 MGP_WSBEiJ_G0012531.1 mouse_genomes_project 4 151969763 151970320 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100816.1 MGP_WSBEiJ_G0039274.1 mouse_genomes_project 4 87892308 87892875 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014171.1 MGP_WSBEiJ_G0012301.1 mouse_genomes_project 4 66163475 66164102 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004347.1 MGP_WSBEiJ_G0003789.1 mouse_genomes_project 4 8743600 8757171 + Gm11842 antisense antisense MGP_WSBEiJ_T0017504.1 MGP_WSBEiJ_G0014998.1 mouse_genomes_project 4 127562365 127565636 + Gm12940 processed_transcript processed_transcript MGP_WSBEiJ_T0017505.1 MGP_WSBEiJ_G0014998.1 mouse_genomes_project 4 127564082 127565636 + Gm12940 processed_transcript processed_transcript MGP_WSBEiJ_T0017506.1 MGP_WSBEiJ_G0014998.1 mouse_genomes_project 4 127564303 127578019 + Gm12940 processed_transcript processed_transcript MGP_WSBEiJ_T0017507.1 MGP_WSBEiJ_G0014998.1 mouse_genomes_project 4 127564404 127565574 + Gm12940 processed_transcript processed_transcript MGP_WSBEiJ_T0098269.1 MGP_WSBEiJ_G0036932.1 mouse_genomes_project 4 96272773 96272836 + Gm27579 snRNA snRNA MGP_WSBEiJ_T0067215.1 MGP_WSBEiJ_G0028109.1 mouse_genomes_project 4 134470061 134477485 + MGP_WSBEiJ_P0067215 Gpn2 protein_coding protein_coding MGP_WSBEiJ_T0067216.1 MGP_WSBEiJ_G0028109.1 mouse_genomes_project 4 134470118 134477235 + MGP_WSBEiJ_P0067216 Gpn2 protein_coding protein_coding MGP_WSBEiJ_T0067217.1 MGP_WSBEiJ_G0028109.1 mouse_genomes_project 4 134470127 134471904 + Gpn2 protein_coding processed_transcript MGP_WSBEiJ_T0007765.1 MGP_WSBEiJ_G0006353.1 mouse_genomes_project 4 86514007 86516916 + Gm12600 lincRNA lincRNA MGP_WSBEiJ_T0066314.1 MGP_WSBEiJ_G0027903.1 mouse_genomes_project 4 119296680 119301126 + MGP_WSBEiJ_P0066314 Cldn19 protein_coding protein_coding MGP_WSBEiJ_T0066315.1 MGP_WSBEiJ_G0027903.1 mouse_genomes_project 4 119296775 119303810 + MGP_WSBEiJ_P0066315 Cldn19 protein_coding protein_coding MGP_WSBEiJ_T0014173.1 MGP_WSBEiJ_G0012303.1 mouse_genomes_project 4 68003597 68007079 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014367.1 MGP_WSBEiJ_G0012497.1 mouse_genomes_project 4 136417342 136417420 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014237.1 MGP_WSBEiJ_G0012367.1 mouse_genomes_project 4 91703527 91703825 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064433.1 MGP_WSBEiJ_G0027467.1 mouse_genomes_project 4 43783779 43858022 + MGP_WSBEiJ_P0064433 Tdrd7 protein_coding protein_coding MGP_WSBEiJ_T0064434.1 MGP_WSBEiJ_G0027467.1 mouse_genomes_project 4 43790661 43858022 + MGP_WSBEiJ_P0064434 Tdrd7 protein_coding protein_coding MGP_WSBEiJ_T0064435.1 MGP_WSBEiJ_G0027467.1 mouse_genomes_project 4 43791271 43808540 + Tdrd7 protein_coding processed_transcript MGP_WSBEiJ_T0064436.1 MGP_WSBEiJ_G0027467.1 mouse_genomes_project 4 43811080 43826509 + Tdrd7 protein_coding processed_transcript MGP_WSBEiJ_T0064437.1 MGP_WSBEiJ_G0027467.1 mouse_genomes_project 4 43849151 43858022 + Tdrd7 protein_coding processed_transcript MGP_WSBEiJ_T0014212.1 MGP_WSBEiJ_G0012342.1 mouse_genomes_project 4 81670099 81670366 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004372.1 MGP_WSBEiJ_G0003809.1 mouse_genomes_project 4 42756674 42760389 + 1700055D18Rik antisense antisense MGP_WSBEiJ_T0004373.1 MGP_WSBEiJ_G0003809.1 mouse_genomes_project 4 42757818 42759383 + 1700055D18Rik antisense antisense MGP_WSBEiJ_T0014108.1 MGP_WSBEiJ_G0012238.1 mouse_genomes_project 4 38115357 38115804 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065867.1 MGP_WSBEiJ_G0027801.1 mouse_genomes_project 4 114583350 114585930 - MGP_WSBEiJ_P0065867 Foxd2 protein_coding protein_coding MGP_WSBEiJ_T0007805.1 MGP_WSBEiJ_G0006383.1 mouse_genomes_project 4 107760490 107767301 + 4930407G08Rik lincRNA lincRNA MGP_WSBEiJ_T0067103.1 MGP_WSBEiJ_G0028082.1 mouse_genomes_project 4 133318116 133321035 - MGP_WSBEiJ_P0067103 Atpif1 protein_coding protein_coding MGP_WSBEiJ_T0067104.1 MGP_WSBEiJ_G0028082.1 mouse_genomes_project 4 133318116 133321206 - MGP_WSBEiJ_P0067104 Atpif1 protein_coding protein_coding MGP_WSBEiJ_T0067105.1 MGP_WSBEiJ_G0028082.1 mouse_genomes_project 4 133320035 133321142 - Atpif1 protein_coding retained_intron MGP_WSBEiJ_T0004439.1 MGP_WSBEiJ_G0003857.1 mouse_genomes_project 4 117928197 117948561 + 9530034E10Rik antisense antisense MGP_WSBEiJ_T0014015.1 MGP_WSBEiJ_G0012145.1 mouse_genomes_project 4 10358440 10359176 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066859.1 MGP_WSBEiJ_G0028039.1 mouse_genomes_project 4 130287552 130296953 - MGP_WSBEiJ_P0066859 Eif3i protein_coding protein_coding MGP_WSBEiJ_T0066860.1 MGP_WSBEiJ_G0028039.1 mouse_genomes_project 4 130288923 130291334 - Eif3i protein_coding retained_intron MGP_WSBEiJ_T0066861.1 MGP_WSBEiJ_G0028039.1 mouse_genomes_project 4 130289120 130296904 - MGP_WSBEiJ_P0066861 Eif3i protein_coding protein_coding MGP_WSBEiJ_T0066862.1 MGP_WSBEiJ_G0028039.1 mouse_genomes_project 4 130290692 130296904 - Eif3i protein_coding processed_transcript MGP_WSBEiJ_T0066863.1 MGP_WSBEiJ_G0028039.1 mouse_genomes_project 4 130294511 130296921 - Eif3i protein_coding retained_intron MGP_WSBEiJ_T0067694.1 MGP_WSBEiJ_G0028217.1 mouse_genomes_project 4 140438820 140453844 - MGP_WSBEiJ_P0067694 Htr6 protein_coding protein_coding MGP_WSBEiJ_T0067695.1 MGP_WSBEiJ_G0028217.1 mouse_genomes_project 4 140439121 140453063 - MGP_WSBEiJ_P0067695 Htr6 protein_coding protein_coding MGP_WSBEiJ_T0014274.1 MGP_WSBEiJ_G0012404.1 mouse_genomes_project 4 105072904 105073397 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068151.1 MGP_WSBEiJ_G0028334.1 mouse_genomes_project 4 151573470 151579180 - MGP_WSBEiJ_P0068151 Rbp7 protein_coding protein_coding MGP_WSBEiJ_T0068152.1 MGP_WSBEiJ_G0028334.1 mouse_genomes_project 4 151573470 151577625 - MGP_WSBEiJ_P0068152 Rbp7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068153.1 MGP_WSBEiJ_G0028334.1 mouse_genomes_project 4 151573486 151579172 - Rbp7 protein_coding processed_transcript MGP_WSBEiJ_T0067212.1 MGP_WSBEiJ_G0028107.1 mouse_genomes_project 4 134431402 134434522 + MGP_WSBEiJ_P0067212 Nr0b2 protein_coding protein_coding MGP_WSBEiJ_T0004384.1 MGP_WSBEiJ_G0003819.1 mouse_genomes_project 4 61118271 61124263 - Gm11209 antisense antisense MGP_WSBEiJ_T0066523.1 MGP_WSBEiJ_G0027959.1 mouse_genomes_project 4 125026215 125041204 - MGP_WSBEiJ_P0066523 Utp11l protein_coding protein_coding MGP_WSBEiJ_T0066524.1 MGP_WSBEiJ_G0027959.1 mouse_genomes_project 4 125026875 125041138 - Utp11l protein_coding processed_transcript MGP_WSBEiJ_T0065202.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94924461 95303550 + MGP_WSBEiJ_P0065202 Fggy protein_coding protein_coding MGP_WSBEiJ_T0065203.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94924465 95210698 + Fggy protein_coding processed_transcript MGP_WSBEiJ_T0065204.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94924473 95303546 + Fggy protein_coding processed_transcript MGP_WSBEiJ_T0065205.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94924474 94963024 + MGP_WSBEiJ_P0065205 Fggy protein_coding protein_coding MGP_WSBEiJ_T0065206.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94946247 95192218 + MGP_WSBEiJ_P0065206 Fggy protein_coding protein_coding MGP_WSBEiJ_T0065207.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94946310 94966441 + Fggy protein_coding processed_transcript MGP_WSBEiJ_T0065208.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94946315 94963030 + MGP_WSBEiJ_P0065208 Fggy protein_coding protein_coding MGP_WSBEiJ_T0065209.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94946320 95139691 + MGP_WSBEiJ_P0065209 Fggy protein_coding protein_coding MGP_WSBEiJ_T0065210.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94952377 95303415 + MGP_WSBEiJ_P0065210 Fggy protein_coding protein_coding MGP_WSBEiJ_T0065211.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94952377 95183270 + MGP_WSBEiJ_P0065211 Fggy protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065212.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94954049 95107855 + Fggy protein_coding processed_transcript MGP_WSBEiJ_T0065213.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94988948 95248827 + Fggy protein_coding processed_transcript MGP_WSBEiJ_T0065214.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 94988955 95107912 + MGP_WSBEiJ_P0065214 Fggy protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065215.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 95002330 95192631 + Fggy protein_coding processed_transcript MGP_WSBEiJ_T0065216.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 95107397 95139700 + Fggy protein_coding processed_transcript MGP_WSBEiJ_T0065217.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 95139763 95303550 + MGP_WSBEiJ_P0065217 Fggy protein_coding protein_coding MGP_WSBEiJ_T0065218.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 95192626 95303415 + MGP_WSBEiJ_P0065218 Fggy protein_coding protein_coding MGP_WSBEiJ_T0065219.1 MGP_WSBEiJ_G0027669.1 mouse_genomes_project 4 95219677 95303545 + MGP_WSBEiJ_P0065219 Fggy protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067005.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131562681 131585637 + MGP_WSBEiJ_P0067005 Laptm5 protein_coding protein_coding MGP_WSBEiJ_T0067006.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131562862 131578074 + MGP_WSBEiJ_P0067006 Laptm5 protein_coding protein_coding MGP_WSBEiJ_T0067007.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131562868 131574452 + Laptm5 protein_coding processed_transcript MGP_WSBEiJ_T0067008.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131562874 131578077 + Laptm5 protein_coding processed_transcript MGP_WSBEiJ_T0067009.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131562875 131575750 + Laptm5 protein_coding processed_transcript MGP_WSBEiJ_T0067010.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131562912 131583307 + MGP_WSBEiJ_P0067010 Laptm5 protein_coding protein_coding MGP_WSBEiJ_T0067011.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131565020 131578095 + Laptm5 protein_coding processed_transcript MGP_WSBEiJ_T0067012.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131565218 131576237 + Laptm5 protein_coding processed_transcript MGP_WSBEiJ_T0067013.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131565501 131584718 + MGP_WSBEiJ_P0067013 Laptm5 protein_coding protein_coding MGP_WSBEiJ_T0067014.1 MGP_WSBEiJ_G0028064.1 mouse_genomes_project 4 131581444 131583591 + Laptm5 protein_coding processed_transcript MGP_WSBEiJ_T0063932.1 MGP_WSBEiJ_G0027369.1 mouse_genomes_project 4 36917395 36918877 + MGP_WSBEiJ_P0063932 1700009N14Rik protein_coding protein_coding MGP_WSBEiJ_T0063666.1 MGP_WSBEiJ_G0027301.1 mouse_genomes_project 4 11717206 11908491 - MGP_WSBEiJ_P0063666 Necab1 protein_coding protein_coding MGP_WSBEiJ_T0063667.1 MGP_WSBEiJ_G0027301.1 mouse_genomes_project 4 11719890 11909154 - MGP_WSBEiJ_P0063667 Necab1 protein_coding protein_coding MGP_WSBEiJ_T0063668.1 MGP_WSBEiJ_G0027301.1 mouse_genomes_project 4 11872071 11908321 - Necab1 protein_coding processed_transcript MGP_WSBEiJ_T0014323.1 MGP_WSBEiJ_G0012453.1 mouse_genomes_project 4 119619865 119620267 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066427.1 MGP_WSBEiJ_G0027929.1 mouse_genomes_project 4 121214489 121259526 - MGP_WSBEiJ_P0066427 Zmpste24 protein_coding protein_coding MGP_WSBEiJ_T0066428.1 MGP_WSBEiJ_G0027929.1 mouse_genomes_project 4 121224949 121236068 - Zmpste24 protein_coding processed_transcript MGP_WSBEiJ_T0066429.1 MGP_WSBEiJ_G0027929.1 mouse_genomes_project 4 121241267 121256983 - MGP_WSBEiJ_P0066429 Zmpste24 protein_coding protein_coding MGP_WSBEiJ_T0004365.1 MGP_WSBEiJ_G0003803.1 mouse_genomes_project 4 41155833 41160154 - Gm12454 antisense antisense MGP_WSBEiJ_T0004366.1 MGP_WSBEiJ_G0003803.1 mouse_genomes_project 4 41157062 41160177 - Gm12454 antisense antisense MGP_WSBEiJ_T0014327.1 MGP_WSBEiJ_G0012457.1 mouse_genomes_project 4 121292060 121293802 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007773.1 MGP_WSBEiJ_G0006360.1 mouse_genomes_project 4 92792193 93017429 - Gm12649 lincRNA lincRNA MGP_WSBEiJ_T0066088.1 MGP_WSBEiJ_G0027851.1 mouse_genomes_project 4 116994704 117018742 + MGP_WSBEiJ_P0066088 Ptch2 protein_coding protein_coding MGP_WSBEiJ_T0066089.1 MGP_WSBEiJ_G0027851.1 mouse_genomes_project 4 116994725 117018742 + MGP_WSBEiJ_P0066089 Ptch2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066090.1 MGP_WSBEiJ_G0027851.1 mouse_genomes_project 4 117003800 117005193 + Ptch2 protein_coding retained_intron MGP_WSBEiJ_T0066091.1 MGP_WSBEiJ_G0027851.1 mouse_genomes_project 4 117004127 117009331 + MGP_WSBEiJ_P0066091 Ptch2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066092.1 MGP_WSBEiJ_G0027851.1 mouse_genomes_project 4 117011050 117011904 + Ptch2 protein_coding retained_intron MGP_WSBEiJ_T0066093.1 MGP_WSBEiJ_G0027851.1 mouse_genomes_project 4 117014509 117019663 + Ptch2 protein_coding retained_intron MGP_WSBEiJ_T0014137.1 MGP_WSBEiJ_G0012267.1 mouse_genomes_project 4 51016083 51019328 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014319.1 MGP_WSBEiJ_G0012449.1 mouse_genomes_project 4 119562148 119562831 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014082.1 MGP_WSBEiJ_G0012212.1 mouse_genomes_project 4 30062647 30063257 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007761.1 MGP_WSBEiJ_G0006349.1 mouse_genomes_project 4 82903122 82907241 - Gm11415 lincRNA lincRNA MGP_WSBEiJ_T0098274.1 MGP_WSBEiJ_G0036937.1 mouse_genomes_project 4 100715474 100715578 + Gm24468 snRNA snRNA MGP_WSBEiJ_T0063990.1 MGP_WSBEiJ_G0027384.1 mouse_genomes_project 4 38584962 38590424 - MGP_WSBEiJ_P0063990 Aqp3 protein_coding protein_coding MGP_WSBEiJ_T0063991.1 MGP_WSBEiJ_G0027384.1 mouse_genomes_project 4 38586020 38586689 - Aqp3 protein_coding retained_intron MGP_WSBEiJ_T0014017.1 MGP_WSBEiJ_G0012147.1 mouse_genomes_project 4 10930566 10931349 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068721.1 MGP_WSBEiJ_G0028437.1 mouse_genomes_project 4 158613539 158616321 + MGP_WSBEiJ_P0068721 Tnfrsf4 protein_coding protein_coding MGP_WSBEiJ_T0068722.1 MGP_WSBEiJ_G0028437.1 mouse_genomes_project 4 158613552 158616308 + Tnfrsf4 protein_coding processed_transcript MGP_WSBEiJ_T0068723.1 MGP_WSBEiJ_G0028437.1 mouse_genomes_project 4 158613945 158614955 + Tnfrsf4 protein_coding processed_transcript MGP_WSBEiJ_T0007687.1 MGP_WSBEiJ_G0006285.1 mouse_genomes_project 4 9804786 9827242 + Gm11820 lincRNA lincRNA MGP_WSBEiJ_T0065617.1 MGP_WSBEiJ_G0027756.1 mouse_genomes_project 4 107681912 107690793 + MGP_WSBEiJ_P0065617 Magoh protein_coding protein_coding MGP_WSBEiJ_T0065618.1 MGP_WSBEiJ_G0027756.1 mouse_genomes_project 4 107686387 107690756 + Magoh protein_coding processed_transcript MGP_WSBEiJ_T0004391.1 MGP_WSBEiJ_G0003826.1 mouse_genomes_project 4 85670982 85672332 + Saxo1os antisense antisense MGP_WSBEiJ_T0004484.1 MGP_WSBEiJ_G0003893.1 mouse_genomes_project 4 139702629 139705122 + AB041806 antisense antisense MGP_WSBEiJ_T0066721.1 MGP_WSBEiJ_G0028008.1 mouse_genomes_project 4 127902312 127905685 - MGP_WSBEiJ_P0066721 Gjb5 protein_coding protein_coding MGP_WSBEiJ_T0098261.1 MGP_WSBEiJ_G0036924.1 mouse_genomes_project 4 67818670 67818777 + Gm24697 snRNA snRNA MGP_WSBEiJ_T0066682.1 MGP_WSBEiJ_G0027998.1 mouse_genomes_project 4 127379967 127490728 - MGP_WSBEiJ_P0066682 Zmym4 protein_coding protein_coding MGP_WSBEiJ_T0066683.1 MGP_WSBEiJ_G0027998.1 mouse_genomes_project 4 127384535 127386346 - Zmym4 protein_coding processed_transcript MGP_WSBEiJ_T0066684.1 MGP_WSBEiJ_G0027998.1 mouse_genomes_project 4 127422389 127432340 - Zmym4 protein_coding processed_transcript MGP_WSBEiJ_T0066685.1 MGP_WSBEiJ_G0027998.1 mouse_genomes_project 4 127427590 127432228 - Zmym4 protein_coding processed_transcript MGP_WSBEiJ_T0066686.1 MGP_WSBEiJ_G0027998.1 mouse_genomes_project 4 127432057 127440872 - Zmym4 protein_coding processed_transcript MGP_WSBEiJ_T0066687.1 MGP_WSBEiJ_G0027998.1 mouse_genomes_project 4 127440510 127443237 - Zmym4 protein_coding processed_transcript MGP_WSBEiJ_T0066688.1 MGP_WSBEiJ_G0027998.1 mouse_genomes_project 4 127443235 127490773 - Zmym4 protein_coding processed_transcript MGP_WSBEiJ_T0066689.1 MGP_WSBEiJ_G0027998.1 mouse_genomes_project 4 127443268 127490797 - Zmym4 protein_coding processed_transcript MGP_WSBEiJ_T0066220.1 MGP_WSBEiJ_G0027874.1 mouse_genomes_project 4 118347706 118396779 - MGP_WSBEiJ_P0066220 Szt2 protein_coding protein_coding MGP_WSBEiJ_T0066221.1 MGP_WSBEiJ_G0027874.1 mouse_genomes_project 4 118347710 118359123 - MGP_WSBEiJ_P0066221 Szt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066222.1 MGP_WSBEiJ_G0027874.1 mouse_genomes_project 4 118348370 118350026 - Szt2 protein_coding processed_transcript MGP_WSBEiJ_T0066223.1 MGP_WSBEiJ_G0027874.1 mouse_genomes_project 4 118353728 118354615 - Szt2 protein_coding retained_intron MGP_WSBEiJ_T0066224.1 MGP_WSBEiJ_G0027874.1 mouse_genomes_project 4 118357521 118358674 - Szt2 protein_coding retained_intron MGP_WSBEiJ_T0066225.1 MGP_WSBEiJ_G0027874.1 mouse_genomes_project 4 118375656 118376460 - Szt2 protein_coding processed_transcript MGP_WSBEiJ_T0067100.1 MGP_WSBEiJ_G0028080.1 mouse_genomes_project 4 133241022 133247475 - MGP_WSBEiJ_P0067100 Med18 protein_coding protein_coding MGP_WSBEiJ_T0067101.1 MGP_WSBEiJ_G0028080.1 mouse_genomes_project 4 133243494 133246885 - MGP_WSBEiJ_P0067101 Med18 protein_coding protein_coding MGP_WSBEiJ_T0065789.1 MGP_WSBEiJ_G0027786.1 mouse_genomes_project 4 109539008 109545334 - MGP_WSBEiJ_P0065789 Cdkn2c protein_coding protein_coding MGP_WSBEiJ_T0065790.1 MGP_WSBEiJ_G0027786.1 mouse_genomes_project 4 109539008 109547151 - MGP_WSBEiJ_P0065790 Cdkn2c protein_coding protein_coding MGP_WSBEiJ_T0014286.1 MGP_WSBEiJ_G0012416.1 mouse_genomes_project 4 108293504 108294040 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068369.1 MGP_WSBEiJ_G0028375.1 mouse_genomes_project 4 154681719 154690335 + Rpl22 protein_coding processed_transcript MGP_WSBEiJ_T0068370.1 MGP_WSBEiJ_G0028375.1 mouse_genomes_project 4 154681830 154690339 + MGP_WSBEiJ_P0068370 Rpl22 protein_coding protein_coding MGP_WSBEiJ_T0068371.1 MGP_WSBEiJ_G0028375.1 mouse_genomes_project 4 154681844 154691930 + MGP_WSBEiJ_P0068371 Rpl22 protein_coding protein_coding MGP_WSBEiJ_T0068372.1 MGP_WSBEiJ_G0028375.1 mouse_genomes_project 4 154681846 154691929 + MGP_WSBEiJ_P0068372 Rpl22 protein_coding protein_coding MGP_WSBEiJ_T0068373.1 MGP_WSBEiJ_G0028375.1 mouse_genomes_project 4 154683044 154686023 + Rpl22 protein_coding processed_transcript MGP_WSBEiJ_T0068374.1 MGP_WSBEiJ_G0028375.1 mouse_genomes_project 4 154683103 154686252 + Rpl22 protein_coding processed_transcript MGP_WSBEiJ_T0068375.1 MGP_WSBEiJ_G0028375.1 mouse_genomes_project 4 154683452 154690332 + Rpl22 protein_coding processed_transcript MGP_WSBEiJ_T0068376.1 MGP_WSBEiJ_G0028375.1 mouse_genomes_project 4 154683529 154690333 + Rpl22 protein_coding processed_transcript MGP_WSBEiJ_T0007764.1 MGP_WSBEiJ_G0006352.1 mouse_genomes_project 4 83796244 83797061 + Gm12415 lincRNA lincRNA MGP_WSBEiJ_T0064297.1 MGP_WSBEiJ_G0027442.1 mouse_genomes_project 4 41392917 41394369 + MGP_WSBEiJ_P0064297 Hrct1 protein_coding protein_coding MGP_WSBEiJ_T0063952.1 MGP_WSBEiJ_G0027375.1 mouse_genomes_project 4 38119057 38139443 - MGP_WSBEiJ_P0063952 Aptx protein_coding protein_coding MGP_WSBEiJ_T0063953.1 MGP_WSBEiJ_G0027375.1 mouse_genomes_project 4 38119368 38139177 - MGP_WSBEiJ_P0063953 Aptx protein_coding protein_coding MGP_WSBEiJ_T0063954.1 MGP_WSBEiJ_G0027375.1 mouse_genomes_project 4 38121913 38139425 - MGP_WSBEiJ_P0063954 Aptx protein_coding protein_coding MGP_WSBEiJ_T0063955.1 MGP_WSBEiJ_G0027375.1 mouse_genomes_project 4 38123150 38139450 - MGP_WSBEiJ_P0063955 Aptx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063956.1 MGP_WSBEiJ_G0027375.1 mouse_genomes_project 4 38127621 38130805 - Aptx protein_coding processed_transcript MGP_WSBEiJ_T0063957.1 MGP_WSBEiJ_G0027375.1 mouse_genomes_project 4 38131317 38138979 - MGP_WSBEiJ_P0063957 Aptx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068209.1 MGP_WSBEiJ_G0028347.1 mouse_genomes_project 4 152365377 152381565 - MGP_WSBEiJ_P0068209 Car6 protein_coding protein_coding MGP_WSBEiJ_T0068210.1 MGP_WSBEiJ_G0028347.1 mouse_genomes_project 4 152365377 152376737 - MGP_WSBEiJ_P0068210 Car6 protein_coding protein_coding MGP_WSBEiJ_T0068211.1 MGP_WSBEiJ_G0028347.1 mouse_genomes_project 4 152365574 152374390 - Car6 protein_coding processed_transcript MGP_WSBEiJ_T0068212.1 MGP_WSBEiJ_G0028347.1 mouse_genomes_project 4 152366643 152376470 - Car6 protein_coding processed_transcript MGP_WSBEiJ_T0017525.1 MGP_WSBEiJ_G0015008.1 mouse_genomes_project 4 158193274 158209690 - Gm16023 processed_transcript processed_transcript MGP_WSBEiJ_T0017526.1 MGP_WSBEiJ_G0015008.1 mouse_genomes_project 4 158200907 158209415 - Gm16023 processed_transcript processed_transcript MGP_WSBEiJ_T0014405.1 MGP_WSBEiJ_G0012535.1 mouse_genomes_project 4 156513372 156514067 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063706.1 MGP_WSBEiJ_G0027319.1 mouse_genomes_project 4 16970040 17646432 - MGP_WSBEiJ_P0063706 Nkain3 protein_coding protein_coding MGP_WSBEiJ_T0063707.1 MGP_WSBEiJ_G0027319.1 mouse_genomes_project 4 17098991 17646721 - MGP_WSBEiJ_P0063707 Nkain3 protein_coding protein_coding MGP_WSBEiJ_T0064758.1 MGP_WSBEiJ_G0027555.1 mouse_genomes_project 4 58036751 58177017 + MGP_WSBEiJ_P0064758 E130308A19Rik protein_coding protein_coding MGP_WSBEiJ_T0064759.1 MGP_WSBEiJ_G0027555.1 mouse_genomes_project 4 58036783 58134277 + MGP_WSBEiJ_P0064759 E130308A19Rik protein_coding protein_coding MGP_WSBEiJ_T0064760.1 MGP_WSBEiJ_G0027555.1 mouse_genomes_project 4 58103505 58133121 + E130308A19Rik protein_coding processed_transcript MGP_WSBEiJ_T0065310.1 MGP_WSBEiJ_G0027690.1 mouse_genomes_project 4 98494512 98502702 + MGP_WSBEiJ_P0065310 Angptl3 protein_coding protein_coding MGP_WSBEiJ_T0065311.1 MGP_WSBEiJ_G0027690.1 mouse_genomes_project 4 98496737 98502596 + Angptl3 protein_coding processed_transcript MGP_WSBEiJ_T0065312.1 MGP_WSBEiJ_G0027690.1 mouse_genomes_project 4 98496761 98510773 + Angptl3 protein_coding processed_transcript MGP_WSBEiJ_T0065761.1 MGP_WSBEiJ_G0027781.1 mouse_genomes_project 4 109090357 109126001 + MGP_WSBEiJ_P0065761 Calr4 protein_coding protein_coding MGP_WSBEiJ_T0065762.1 MGP_WSBEiJ_G0027781.1 mouse_genomes_project 4 109106712 109126251 + MGP_WSBEiJ_P0065762 Calr4 protein_coding protein_coding MGP_WSBEiJ_T0065763.1 MGP_WSBEiJ_G0027781.1 mouse_genomes_project 4 109107859 109126251 + MGP_WSBEiJ_P0065763 Calr4 protein_coding protein_coding MGP_WSBEiJ_T0065764.1 MGP_WSBEiJ_G0027781.1 mouse_genomes_project 4 109116811 109125823 + Calr4 protein_coding processed_transcript MGP_WSBEiJ_T0099575.1 MGP_WSBEiJ_G0038238.1 mouse_genomes_project 4 135109114 135109202 - Gm27619 snoRNA snoRNA MGP_WSBEiJ_T0064420.1 MGP_WSBEiJ_G0027463.1 mouse_genomes_project 4 43612028 43617587 + MGP_WSBEiJ_P0064420 Aldh1b1 protein_coding protein_coding MGP_WSBEiJ_T0064421.1 MGP_WSBEiJ_G0027463.1 mouse_genomes_project 4 43612127 43615841 + MGP_WSBEiJ_P0064421 Aldh1b1 protein_coding protein_coding MGP_WSBEiJ_T0067703.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140583826 140672319 + MGP_WSBEiJ_P0067703 Capzb protein_coding protein_coding MGP_WSBEiJ_T0067704.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140583828 140683991 + MGP_WSBEiJ_P0067704 Capzb protein_coding protein_coding MGP_WSBEiJ_T0067705.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140583843 140630403 + Capzb protein_coding retained_intron MGP_WSBEiJ_T0067706.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140583850 140683322 + MGP_WSBEiJ_P0067706 Capzb protein_coding protein_coding MGP_WSBEiJ_T0067707.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140583873 140684047 + Capzb protein_coding processed_transcript MGP_WSBEiJ_T0067708.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140584900 140683672 + MGP_WSBEiJ_P0067708 Capzb protein_coding protein_coding MGP_WSBEiJ_T0067709.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140585015 140630663 + Capzb protein_coding retained_intron MGP_WSBEiJ_T0067710.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140590162 140654353 + MGP_WSBEiJ_P0067710 Capzb protein_coding protein_coding MGP_WSBEiJ_T0067711.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140618171 140679322 + MGP_WSBEiJ_P0067711 Capzb protein_coding protein_coding MGP_WSBEiJ_T0067712.1 MGP_WSBEiJ_G0028220.1 mouse_genomes_project 4 140681177 140682047 + Capzb protein_coding processed_transcript MGP_WSBEiJ_T0066827.1 MGP_WSBEiJ_G0028031.1 mouse_genomes_project 4 130104660 130122118 - MGP_WSBEiJ_P0066827 Zbtb8b protein_coding protein_coding MGP_WSBEiJ_T0066828.1 MGP_WSBEiJ_G0028031.1 mouse_genomes_project 4 130104660 130122083 - MGP_WSBEiJ_P0066828 Zbtb8b protein_coding protein_coding MGP_WSBEiJ_T0066829.1 MGP_WSBEiJ_G0028031.1 mouse_genomes_project 4 130105371 130111618 - Zbtb8b protein_coding processed_transcript MGP_WSBEiJ_T0066830.1 MGP_WSBEiJ_G0028031.1 mouse_genomes_project 4 130108236 130122085 - Zbtb8b protein_coding retained_intron MGP_WSBEiJ_T0066840.1 MGP_WSBEiJ_G0028034.1 mouse_genomes_project 4 130172905 130173672 + MGP_WSBEiJ_P0066840 Fam229a protein_coding protein_coding MGP_WSBEiJ_T0066841.1 MGP_WSBEiJ_G0028034.1 mouse_genomes_project 4 130172955 130173672 + Fam229a protein_coding retained_intron MGP_WSBEiJ_T0065902.1 MGP_WSBEiJ_G0027815.1 mouse_genomes_project 4 115553113 115590515 + MGP_WSBEiJ_P0065902 Efcab14 protein_coding protein_coding MGP_WSBEiJ_T0065903.1 MGP_WSBEiJ_G0027815.1 mouse_genomes_project 4 115553148 115573692 + Efcab14 protein_coding processed_transcript MGP_WSBEiJ_T0065904.1 MGP_WSBEiJ_G0027815.1 mouse_genomes_project 4 115553148 115585066 + MGP_WSBEiJ_P0065904 Efcab14 protein_coding protein_coding MGP_WSBEiJ_T0065905.1 MGP_WSBEiJ_G0027815.1 mouse_genomes_project 4 115553149 115569356 + Efcab14 protein_coding processed_transcript MGP_WSBEiJ_T0065906.1 MGP_WSBEiJ_G0027815.1 mouse_genomes_project 4 115553442 115593396 + MGP_WSBEiJ_P0065906 Efcab14 protein_coding protein_coding MGP_WSBEiJ_T0065907.1 MGP_WSBEiJ_G0027815.1 mouse_genomes_project 4 115553812 115590158 + MGP_WSBEiJ_P0065907 Efcab14 protein_coding protein_coding MGP_WSBEiJ_T0065908.1 MGP_WSBEiJ_G0027815.1 mouse_genomes_project 4 115582837 115591268 + Efcab14 protein_coding processed_transcript MGP_WSBEiJ_T0065381.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 101658024 102203133 + MGP_WSBEiJ_P0065381 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0065382.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 101658206 101767442 + Pde4b protein_coding retained_intron MGP_WSBEiJ_T0065383.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 101658222 102154193 + MGP_WSBEiJ_P0065383 Pde4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065384.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 101830222 102152514 + MGP_WSBEiJ_P0065384 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0065385.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 101830483 102204559 + MGP_WSBEiJ_P0065385 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0065386.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 101830710 102101456 + MGP_WSBEiJ_P0065386 Pde4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065387.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 102005815 102202836 + MGP_WSBEiJ_P0065387 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0065388.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 102014630 102139093 + MGP_WSBEiJ_P0065388 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0065389.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 102059099 102079505 + Pde4b protein_coding retained_intron MGP_WSBEiJ_T0065390.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 102166667 102203147 + MGP_WSBEiJ_P0065390 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0065391.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 102184941 102203003 + MGP_WSBEiJ_P0065391 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0065392.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 102187105 102203161 + MGP_WSBEiJ_P0065392 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0065393.1 MGP_WSBEiJ_G0027712.1 mouse_genomes_project 4 102187225 102200747 + MGP_WSBEiJ_P0065393 Pde4b protein_coding protein_coding MGP_WSBEiJ_T0004380.1 MGP_WSBEiJ_G0003815.1 mouse_genomes_project 4 51714095 51715806 - 1700060J05Rik antisense antisense MGP_WSBEiJ_T0064639.1 MGP_WSBEiJ_G0027527.1 mouse_genomes_project 4 54993400 55050133 - MGP_WSBEiJ_P0064639 Ikbkap protein_coding protein_coding MGP_WSBEiJ_T0064640.1 MGP_WSBEiJ_G0027527.1 mouse_genomes_project 4 54994732 55001905 - Ikbkap protein_coding retained_intron MGP_WSBEiJ_T0064641.1 MGP_WSBEiJ_G0027527.1 mouse_genomes_project 4 54994735 55007950 - Ikbkap protein_coding retained_intron MGP_WSBEiJ_T0064642.1 MGP_WSBEiJ_G0027527.1 mouse_genomes_project 4 54999487 55003011 - Ikbkap protein_coding retained_intron MGP_WSBEiJ_T0064643.1 MGP_WSBEiJ_G0027527.1 mouse_genomes_project 4 55012476 55017219 - Ikbkap protein_coding retained_intron MGP_WSBEiJ_T0064644.1 MGP_WSBEiJ_G0027527.1 mouse_genomes_project 4 55021067 55024342 - Ikbkap protein_coding retained_intron MGP_WSBEiJ_T0068526.1 MGP_WSBEiJ_G0028402.1 mouse_genomes_project 4 157599581 157613199 - Rer1 protein_coding processed_transcript MGP_WSBEiJ_T0068527.1 MGP_WSBEiJ_G0028402.1 mouse_genomes_project 4 157600410 157613215 - MGP_WSBEiJ_P0068527 Rer1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0068528.1 MGP_WSBEiJ_G0028402.1 mouse_genomes_project 4 157609517 157613210 - Rer1 protein_coding processed_transcript MGP_WSBEiJ_T0014209.1 MGP_WSBEiJ_G0012339.1 mouse_genomes_project 4 79407160 79407644 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007906.1 MGP_WSBEiJ_G0006463.1 mouse_genomes_project 4 157365031 157366551 + lincRNA lincRNA MGP_WSBEiJ_T0064620.1 MGP_WSBEiJ_G0027519.1 mouse_genomes_project 4 51927336 51937632 + MGP_WSBEiJ_P0064620 Tal2 protein_coding protein_coding MGP_WSBEiJ_T0067070.1 MGP_WSBEiJ_G0028075.1 mouse_genomes_project 4 133032576 133055510 + MGP_WSBEiJ_P0067070 Taf12 protein_coding protein_coding MGP_WSBEiJ_T0067071.1 MGP_WSBEiJ_G0028075.1 mouse_genomes_project 4 133032614 133035150 + Taf12 protein_coding processed_transcript MGP_WSBEiJ_T0067072.1 MGP_WSBEiJ_G0028075.1 mouse_genomes_project 4 133032617 133052568 + MGP_WSBEiJ_P0067072 Taf12 protein_coding protein_coding MGP_WSBEiJ_T0066241.1 MGP_WSBEiJ_G0027878.1 mouse_genomes_project 4 118435541 118452046 - MGP_WSBEiJ_P0066241 Mpl protein_coding unknown_likely_coding MGP_WSBEiJ_T0066242.1 MGP_WSBEiJ_G0027878.1 mouse_genomes_project 4 118435550 118452088 - MGP_WSBEiJ_P0066242 Mpl protein_coding protein_coding MGP_WSBEiJ_T0066243.1 MGP_WSBEiJ_G0027878.1 mouse_genomes_project 4 118435552 118452070 - MGP_WSBEiJ_P0066243 Mpl protein_coding protein_coding MGP_WSBEiJ_T0066244.1 MGP_WSBEiJ_G0027878.1 mouse_genomes_project 4 118436407 118452032 - MGP_WSBEiJ_P0066244 Mpl protein_coding protein_coding MGP_WSBEiJ_T0066245.1 MGP_WSBEiJ_G0027878.1 mouse_genomes_project 4 118436564 118452025 - MGP_WSBEiJ_P0066245 Mpl protein_coding protein_coding MGP_WSBEiJ_T0004438.1 MGP_WSBEiJ_G0003856.1 mouse_genomes_project 4 117833581 117835956 + Gm12841 antisense antisense MGP_WSBEiJ_T0065141.1 MGP_WSBEiJ_G0027645.1 mouse_genomes_project 4 87963334 87967520 - MGP_WSBEiJ_P0065141 Klhl9 protein_coding protein_coding MGP_WSBEiJ_T0063617.1 MGP_WSBEiJ_G0027287.1 mouse_genomes_project 4 8276124 8282966 + MGP_WSBEiJ_P0063617 Fsbp protein_coding protein_coding MGP_WSBEiJ_T0014194.1 MGP_WSBEiJ_G0012324.1 mouse_genomes_project 4 74143404 74144119 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017450.1 MGP_WSBEiJ_G0014963.1 mouse_genomes_project 4 32501158 32511957 + Gm12367 processed_transcript processed_transcript MGP_WSBEiJ_T0017451.1 MGP_WSBEiJ_G0014963.1 mouse_genomes_project 4 32501176 32512055 + Gm12367 processed_transcript processed_transcript MGP_WSBEiJ_T0017452.1 MGP_WSBEiJ_G0014963.1 mouse_genomes_project 4 32501193 32539235 + Gm12367 processed_transcript processed_transcript MGP_WSBEiJ_T0004489.1 MGP_WSBEiJ_G0003898.1 mouse_genomes_project 4 142665137 142667601 + 4921514A10Rik antisense antisense MGP_WSBEiJ_T0014316.1 MGP_WSBEiJ_G0012446.1 mouse_genomes_project 4 118485884 118486311 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063525.1 MGP_WSBEiJ_G0027272.1 mouse_genomes_project 4 5139294 5216146 + MGP_WSBEiJ_P0063525 Rab2a protein_coding unknown_likely_coding MGP_WSBEiJ_T0098293.1 MGP_WSBEiJ_G0036956.1 mouse_genomes_project 4 125045080 125045183 - Gm24480 snRNA snRNA MGP_WSBEiJ_T0067672.1 MGP_WSBEiJ_G0028209.1 mouse_genomes_project 4 140103811 140111981 - MGP_WSBEiJ_P0067672 Pla2g2f protein_coding protein_coding MGP_WSBEiJ_T0010422.1 MGP_WSBEiJ_G0008579.1 mouse_genomes_project 4 46159242 46159339 - Mir1958 miRNA miRNA MGP_WSBEiJ_T0001395.1 MGP_WSBEiJ_G0001323.1 mouse_genomes_project 4 154318795 154321655 - TEC TEC MGP_WSBEiJ_T0065000.1 MGP_WSBEiJ_G0027615.1 mouse_genomes_project 4 82234729 82345973 - MGP_WSBEiJ_P0065000 Ttc39b protein_coding protein_coding MGP_WSBEiJ_T0065001.1 MGP_WSBEiJ_G0027615.1 mouse_genomes_project 4 82239247 82300694 - MGP_WSBEiJ_P0065001 Ttc39b protein_coding unknown_likely_coding MGP_WSBEiJ_T0065002.1 MGP_WSBEiJ_G0027615.1 mouse_genomes_project 4 82240877 82247633 - Ttc39b protein_coding retained_intron MGP_WSBEiJ_T0065003.1 MGP_WSBEiJ_G0027615.1 mouse_genomes_project 4 82254223 82345957 - MGP_WSBEiJ_P0065003 Ttc39b protein_coding protein_coding MGP_WSBEiJ_T0065004.1 MGP_WSBEiJ_G0027615.1 mouse_genomes_project 4 82261920 82281622 - Ttc39b protein_coding processed_transcript MGP_WSBEiJ_T0065005.1 MGP_WSBEiJ_G0027615.1 mouse_genomes_project 4 82267293 82300705 - MGP_WSBEiJ_P0065005 Ttc39b protein_coding protein_coding MGP_WSBEiJ_T0065006.1 MGP_WSBEiJ_G0027615.1 mouse_genomes_project 4 82274809 82345907 - MGP_WSBEiJ_P0065006 Ttc39b protein_coding protein_coding MGP_WSBEiJ_T0065007.1 MGP_WSBEiJ_G0027615.1 mouse_genomes_project 4 82274940 82294981 - MGP_WSBEiJ_P0065007 Ttc39b protein_coding protein_coding MGP_WSBEiJ_T0014174.1 MGP_WSBEiJ_G0012304.1 mouse_genomes_project 4 68403526 68404107 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011373.1 MGP_WSBEiJ_G0009530.1 mouse_genomes_project 4 88730437 88730586 + Gm27580 misc_RNA misc_RNA MGP_WSBEiJ_T0066548.1 MGP_WSBEiJ_G0027965.1 mouse_genomes_project 4 125207623 125211374 + MGP_WSBEiJ_P0066548 Yrdc protein_coding protein_coding MGP_WSBEiJ_T0066549.1 MGP_WSBEiJ_G0027965.1 mouse_genomes_project 4 125208754 125211545 + Yrdc protein_coding retained_intron MGP_WSBEiJ_T0010415.1 MGP_WSBEiJ_G0008572.1 mouse_genomes_project 4 38308556 38308639 - Gm24112 miRNA miRNA MGP_WSBEiJ_T0017492.1 MGP_WSBEiJ_G0014992.1 mouse_genomes_project 4 118999887 119029452 + Gm12861 processed_transcript processed_transcript MGP_WSBEiJ_T0001384.1 MGP_WSBEiJ_G0001313.1 mouse_genomes_project 4 132594703 132599313 + TEC TEC MGP_WSBEiJ_T0004370.1 MGP_WSBEiJ_G0003807.1 mouse_genomes_project 4 42711344 42714670 + Gm12493 antisense antisense MGP_WSBEiJ_T0014388.1 MGP_WSBEiJ_G0012518.1 mouse_genomes_project 4 145464820 145465075 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097215.1 MGP_WSBEiJ_G0035896.1 mouse_genomes_project 4 133643678 133643843 - Gm22767 scaRNA scaRNA MGP_WSBEiJ_T0065983.1 MGP_WSBEiJ_G0027830.1 mouse_genomes_project 4 116004172 116009908 - MGP_WSBEiJ_P0065983 Tspan1 protein_coding protein_coding MGP_WSBEiJ_T0065984.1 MGP_WSBEiJ_G0027830.1 mouse_genomes_project 4 116005611 116009909 - MGP_WSBEiJ_P0065984 Tspan1 protein_coding protein_coding MGP_WSBEiJ_T0065985.1 MGP_WSBEiJ_G0027830.1 mouse_genomes_project 4 116005635 116007137 - Tspan1 protein_coding retained_intron MGP_WSBEiJ_T0014112.1 MGP_WSBEiJ_G0012242.1 mouse_genomes_project 4 41469849 41471210 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066711.1 MGP_WSBEiJ_G0028003.1 mouse_genomes_project 4 127709107 127782027 + MGP_WSBEiJ_P0066711 Dlgap3 protein_coding protein_coding MGP_WSBEiJ_T0066712.1 MGP_WSBEiJ_G0028003.1 mouse_genomes_project 4 127714952 127782027 + MGP_WSBEiJ_P0066712 Dlgap3 protein_coding protein_coding MGP_WSBEiJ_T0066713.1 MGP_WSBEiJ_G0028003.1 mouse_genomes_project 4 127736599 127781373 + MGP_WSBEiJ_P0066713 Dlgap3 protein_coding protein_coding MGP_WSBEiJ_T0066714.1 MGP_WSBEiJ_G0028003.1 mouse_genomes_project 4 127747737 127758965 + Dlgap3 protein_coding processed_transcript MGP_WSBEiJ_T0064205.1 MGP_WSBEiJ_G0027425.1 mouse_genomes_project 4 41131152 41132799 - MGP_WSBEiJ_P0064205 Sit1 protein_coding protein_coding MGP_WSBEiJ_T0064206.1 MGP_WSBEiJ_G0027425.1 mouse_genomes_project 4 41131258 41132287 - Sit1 protein_coding processed_transcript MGP_WSBEiJ_T0014391.1 MGP_WSBEiJ_G0012521.1 mouse_genomes_project 4 146347034 146350098 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014110.1 MGP_WSBEiJ_G0012240.1 mouse_genomes_project 4 38638429 38638763 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007802.1 MGP_WSBEiJ_G0006381.1 mouse_genomes_project 4 107563796 107569112 + Gm12907 lincRNA lincRNA MGP_WSBEiJ_T0004363.1 MGP_WSBEiJ_G0003801.1 mouse_genomes_project 4 39173135 39175174 + Gm12406 antisense antisense MGP_WSBEiJ_T0017453.1 MGP_WSBEiJ_G0014964.1 mouse_genomes_project 4 39050830 39055927 + Gm12404 processed_transcript processed_transcript MGP_WSBEiJ_T0067778.1 MGP_WSBEiJ_G0028238.1 mouse_genomes_project 4 142353139 142389649 - MGP_WSBEiJ_P0067778 Padi1 protein_coding protein_coding MGP_WSBEiJ_T0007873.1 MGP_WSBEiJ_G0006431.1 mouse_genomes_project 4 138274696 138275709 - Gm13001 lincRNA lincRNA MGP_WSBEiJ_T0068417.1 MGP_WSBEiJ_G0028382.1 mouse_genomes_project 4 156440659 156476879 + MGP_WSBEiJ_P0068417 Cep104 protein_coding protein_coding MGP_WSBEiJ_T0068418.1 MGP_WSBEiJ_G0028382.1 mouse_genomes_project 4 156455995 156476879 + MGP_WSBEiJ_P0068418 Cep104 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068419.1 MGP_WSBEiJ_G0028382.1 mouse_genomes_project 4 156456731 156457602 + Cep104 protein_coding retained_intron MGP_WSBEiJ_T0014220.1 MGP_WSBEiJ_G0012350.1 mouse_genomes_project 4 84253011 84253414 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007861.1 MGP_WSBEiJ_G0006423.1 mouse_genomes_project 4 133073239 133074533 + Snhg12 lincRNA lincRNA MGP_WSBEiJ_T0007862.1 MGP_WSBEiJ_G0006423.1 mouse_genomes_project 4 133073254 133075532 + Snhg12 lincRNA lincRNA MGP_WSBEiJ_T0017472.1 MGP_WSBEiJ_G0014978.1 mouse_genomes_project 4 93811907 93830495 - Gm12655 processed_transcript processed_transcript MGP_WSBEiJ_T0017473.1 MGP_WSBEiJ_G0014978.1 mouse_genomes_project 4 93812999 93830482 - Gm12655 processed_transcript processed_transcript MGP_WSBEiJ_T0007681.1 MGP_WSBEiJ_G0006280.1 mouse_genomes_project 4 7798357 7802543 + Gm11827 lincRNA lincRNA MGP_WSBEiJ_T0007682.1 MGP_WSBEiJ_G0006280.1 mouse_genomes_project 4 7799510 7802543 + Gm11827 lincRNA lincRNA MGP_WSBEiJ_T0064305.1 MGP_WSBEiJ_G0027446.1 mouse_genomes_project 4 41668907 41670848 + MGP_WSBEiJ_P0064305 Ccin protein_coding protein_coding MGP_WSBEiJ_T0064761.1 MGP_WSBEiJ_G0027556.1 mouse_genomes_project 4 58188577 58198479 - MGP_WSBEiJ_P0064761 Inip protein_coding protein_coding MGP_WSBEiJ_T0064762.1 MGP_WSBEiJ_G0027556.1 mouse_genomes_project 4 58190301 58200039 - Inip protein_coding processed_transcript MGP_WSBEiJ_T0064763.1 MGP_WSBEiJ_G0027556.1 mouse_genomes_project 4 58197220 58200050 - Inip protein_coding processed_transcript MGP_WSBEiJ_T0067558.1 MGP_WSBEiJ_G0028185.1 mouse_genomes_project 4 138443467 138465715 + MGP_WSBEiJ_P0067558 Wnt4 protein_coding protein_coding MGP_WSBEiJ_T0066275.1 MGP_WSBEiJ_G0027895.1 mouse_genomes_project 4 118990190 118997503 + MGP_WSBEiJ_P0066275 Lao1 protein_coding protein_coding MGP_WSBEiJ_T0066276.1 MGP_WSBEiJ_G0027895.1 mouse_genomes_project 4 118993973 118996674 + Lao1 protein_coding processed_transcript MGP_WSBEiJ_T0068073.1 MGP_WSBEiJ_G0028323.1 mouse_genomes_project 4 150665880 150667744 + MGP_WSBEiJ_P0068073 Masp2 protein_coding protein_coding MGP_WSBEiJ_T0068074.1 MGP_WSBEiJ_G0028323.1 mouse_genomes_project 4 150665890 150680509 + MGP_WSBEiJ_P0068074 Masp2 protein_coding protein_coding MGP_WSBEiJ_T0068075.1 MGP_WSBEiJ_G0028323.1 mouse_genomes_project 4 150665894 150675222 + Masp2 protein_coding retained_intron MGP_WSBEiJ_T0068076.1 MGP_WSBEiJ_G0028323.1 mouse_genomes_project 4 150665901 150667744 + Masp2 protein_coding retained_intron MGP_WSBEiJ_T0007782.1 MGP_WSBEiJ_G0006368.1 mouse_genomes_project 4 99558697 99572319 + Gm12702 lincRNA lincRNA MGP_WSBEiJ_T0014186.1 MGP_WSBEiJ_G0012316.1 mouse_genomes_project 4 72224626 72225489 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014352.1 MGP_WSBEiJ_G0012482.1 mouse_genomes_project 4 127842688 127843370 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064956.1 MGP_WSBEiJ_G0027607.1 mouse_genomes_project 4 78951973 78953117 + MGP_WSBEiJ_P0064956 protein_coding protein_coding MGP_WSBEiJ_T0067000.1 MGP_WSBEiJ_G0028063.1 mouse_genomes_project 4 131421044 131464870 + MGP_WSBEiJ_P0067000 Sdc3 protein_coding protein_coding MGP_WSBEiJ_T0067001.1 MGP_WSBEiJ_G0028063.1 mouse_genomes_project 4 131421211 131454379 + Sdc3 protein_coding retained_intron MGP_WSBEiJ_T0067002.1 MGP_WSBEiJ_G0028063.1 mouse_genomes_project 4 131446952 131456165 + MGP_WSBEiJ_P0067002 Sdc3 protein_coding protein_coding MGP_WSBEiJ_T0067003.1 MGP_WSBEiJ_G0028063.1 mouse_genomes_project 4 131451409 131456165 + MGP_WSBEiJ_P0067003 Sdc3 protein_coding protein_coding MGP_WSBEiJ_T0067004.1 MGP_WSBEiJ_G0028063.1 mouse_genomes_project 4 131453950 131459356 + Sdc3 protein_coding retained_intron MGP_WSBEiJ_T0068203.1 MGP_WSBEiJ_G0028345.1 mouse_genomes_project 4 152287958 152314900 + MGP_WSBEiJ_P0068203 Slc2a5 protein_coding protein_coding MGP_WSBEiJ_T0068204.1 MGP_WSBEiJ_G0028345.1 mouse_genomes_project 4 152297577 152309764 + Slc2a5 protein_coding processed_transcript MGP_WSBEiJ_T0068205.1 MGP_WSBEiJ_G0028345.1 mouse_genomes_project 4 152309076 152312959 + Slc2a5 protein_coding retained_intron MGP_WSBEiJ_T0068206.1 MGP_WSBEiJ_G0028345.1 mouse_genomes_project 4 152309277 152313544 + Slc2a5 protein_coding processed_transcript MGP_WSBEiJ_T0067306.1 MGP_WSBEiJ_G0028124.1 mouse_genomes_project 4 135174031 135184346 - MGP_WSBEiJ_P0067306 Cnksr1 protein_coding protein_coding MGP_WSBEiJ_T0067307.1 MGP_WSBEiJ_G0028124.1 mouse_genomes_project 4 135174039 135184286 - Cnksr1 protein_coding processed_transcript MGP_WSBEiJ_T0067308.1 MGP_WSBEiJ_G0028124.1 mouse_genomes_project 4 135175344 135176419 - Cnksr1 protein_coding processed_transcript MGP_WSBEiJ_T0067309.1 MGP_WSBEiJ_G0028124.1 mouse_genomes_project 4 135176408 135179143 - Cnksr1 protein_coding processed_transcript MGP_WSBEiJ_T0067310.1 MGP_WSBEiJ_G0028124.1 mouse_genomes_project 4 135178454 135181932 - Cnksr1 protein_coding processed_transcript MGP_WSBEiJ_T0010474.1 MGP_WSBEiJ_G0008631.1 mouse_genomes_project 4 141424989 141425084 - Mir2139 miRNA miRNA MGP_WSBEiJ_T0014170.1 MGP_WSBEiJ_G0012300.1 mouse_genomes_project 4 65791981 65792350 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065344.1 MGP_WSBEiJ_G0027701.1 mouse_genomes_project 4 100543370 100543769 - MGP_WSBEiJ_P0065344 Gm10577 protein_coding protein_coding MGP_WSBEiJ_T0099551.1 MGP_WSBEiJ_G0038214.1 mouse_genomes_project 4 117059140 117059209 - Gm22980 snoRNA snoRNA MGP_WSBEiJ_T0066342.1 MGP_WSBEiJ_G0027907.1 mouse_genomes_project 4 119469147 119474369 - Ppcs protein_coding retained_intron MGP_WSBEiJ_T0066343.1 MGP_WSBEiJ_G0027907.1 mouse_genomes_project 4 119469147 119474431 - MGP_WSBEiJ_P0066343 Ppcs protein_coding protein_coding MGP_WSBEiJ_T0066344.1 MGP_WSBEiJ_G0027907.1 mouse_genomes_project 4 119469147 119474387 - MGP_WSBEiJ_P0066344 Ppcs protein_coding protein_coding MGP_WSBEiJ_T0010405.1 MGP_WSBEiJ_G0008562.1 mouse_genomes_project 4 20488871 20488961 - Gm25978 miRNA miRNA MGP_WSBEiJ_T0014200.1 MGP_WSBEiJ_G0012330.1 mouse_genomes_project 4 75640522 75640759 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067291.1 MGP_WSBEiJ_G0028121.1 mouse_genomes_project 4 135074625 135076009 - MGP_WSBEiJ_P0067291 Sh3bgrl3 protein_coding protein_coding MGP_WSBEiJ_T0067292.1 MGP_WSBEiJ_G0028121.1 mouse_genomes_project 4 135074632 135075959 - MGP_WSBEiJ_P0067292 Sh3bgrl3 protein_coding protein_coding MGP_WSBEiJ_T0067293.1 MGP_WSBEiJ_G0028121.1 mouse_genomes_project 4 135075059 135075957 - Sh3bgrl3 protein_coding retained_intron MGP_WSBEiJ_T0064590.1 MGP_WSBEiJ_G0027510.1 mouse_genomes_project 4 50971010 50972069 - MGP_WSBEiJ_P0064590 Olfr273 protein_coding protein_coding MGP_WSBEiJ_T0064591.1 MGP_WSBEiJ_G0027510.1 mouse_genomes_project 4 50971054 50973963 - MGP_WSBEiJ_P0064591 Olfr273 protein_coding protein_coding MGP_WSBEiJ_T0007838.1 MGP_WSBEiJ_G0006407.1 mouse_genomes_project 4 129464226 129497403 + Gm12968 lincRNA lincRNA MGP_WSBEiJ_T0063751.1 MGP_WSBEiJ_G0027327.1 mouse_genomes_project 4 19214028 19230865 + Fbxl4 protein_coding processed_transcript MGP_WSBEiJ_T0063752.1 MGP_WSBEiJ_G0027327.1 mouse_genomes_project 4 19214028 19289028 + MGP_WSBEiJ_P0063752 Fbxl4 protein_coding protein_coding MGP_WSBEiJ_T0063753.1 MGP_WSBEiJ_G0027327.1 mouse_genomes_project 4 19214045 19289001 + MGP_WSBEiJ_P0063753 Fbxl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063754.1 MGP_WSBEiJ_G0027327.1 mouse_genomes_project 4 19214056 19289025 + MGP_WSBEiJ_P0063754 Fbxl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063755.1 MGP_WSBEiJ_G0027327.1 mouse_genomes_project 4 19214101 19289012 + MGP_WSBEiJ_P0063755 Fbxl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068607.1 MGP_WSBEiJ_G0028414.1 mouse_genomes_project 4 158235491 158238220 - MGP_WSBEiJ_P0068607 Mmp23 protein_coding protein_coding MGP_WSBEiJ_T0068608.1 MGP_WSBEiJ_G0028414.1 mouse_genomes_project 4 158235493 158236862 - Mmp23 protein_coding retained_intron MGP_WSBEiJ_T0068609.1 MGP_WSBEiJ_G0028414.1 mouse_genomes_project 4 158237089 158238043 - Mmp23 protein_coding retained_intron MGP_WSBEiJ_T0068610.1 MGP_WSBEiJ_G0028414.1 mouse_genomes_project 4 158237106 158237728 - Mmp23 protein_coding retained_intron MGP_WSBEiJ_T0014065.1 MGP_WSBEiJ_G0012195.1 mouse_genomes_project 4 25075529 25076552 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007793.1 MGP_WSBEiJ_G0006376.1 mouse_genomes_project 4 105810269 105827518 - Gm12729 lincRNA lincRNA MGP_WSBEiJ_T0014012.1 MGP_WSBEiJ_G0012142.1 mouse_genomes_project 4 8110088 8110503 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065107.1 MGP_WSBEiJ_G0027631.1 mouse_genomes_project 4 87002759 87275487 - MGP_WSBEiJ_P0065107 Mllt3 protein_coding protein_coding MGP_WSBEiJ_T0065108.1 MGP_WSBEiJ_G0027631.1 mouse_genomes_project 4 87007082 87043180 - MGP_WSBEiJ_P0065108 Mllt3 protein_coding protein_coding MGP_WSBEiJ_T0065109.1 MGP_WSBEiJ_G0027631.1 mouse_genomes_project 4 87007119 87043151 - MGP_WSBEiJ_P0065109 Mllt3 protein_coding protein_coding MGP_WSBEiJ_T0065110.1 MGP_WSBEiJ_G0027631.1 mouse_genomes_project 4 87027288 87275672 - Mllt3 protein_coding processed_transcript MGP_WSBEiJ_T0065111.1 MGP_WSBEiJ_G0027631.1 mouse_genomes_project 4 87069572 87112360 - Mllt3 protein_coding processed_transcript MGP_WSBEiJ_T0065112.1 MGP_WSBEiJ_G0027631.1 mouse_genomes_project 4 87074210 87274542 - Mllt3 protein_coding retained_intron MGP_WSBEiJ_T0065113.1 MGP_WSBEiJ_G0027631.1 mouse_genomes_project 4 87077875 87274542 - MGP_WSBEiJ_P0065113 Mllt3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065562.1 MGP_WSBEiJ_G0027748.1 mouse_genomes_project 4 107010715 107032068 - MGP_WSBEiJ_P0065562 Lrrc42 protein_coding protein_coding MGP_WSBEiJ_T0065563.1 MGP_WSBEiJ_G0027748.1 mouse_genomes_project 4 107010718 107022062 - Lrrc42 protein_coding retained_intron MGP_WSBEiJ_T0065564.1 MGP_WSBEiJ_G0027748.1 mouse_genomes_project 4 107010960 107013182 - Lrrc42 protein_coding retained_intron MGP_WSBEiJ_T0065565.1 MGP_WSBEiJ_G0027748.1 mouse_genomes_project 4 107011140 107018288 - MGP_WSBEiJ_P0065565 Lrrc42 protein_coding protein_coding MGP_WSBEiJ_T0065566.1 MGP_WSBEiJ_G0027748.1 mouse_genomes_project 4 107025948 107031696 - MGP_WSBEiJ_P0065566 Lrrc42 protein_coding protein_coding MGP_WSBEiJ_T0065504.1 MGP_WSBEiJ_G0027739.1 mouse_genomes_project 4 106478337 106493913 + MGP_WSBEiJ_P0065504 Fam151a protein_coding protein_coding MGP_WSBEiJ_T0014318.1 MGP_WSBEiJ_G0012448.1 mouse_genomes_project 4 119016785 119017791 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065192.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94285770 94322582 - MGP_WSBEiJ_P0065192 Mysm1 protein_coding protein_coding MGP_WSBEiJ_T0065193.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94285793 94297066 - Mysm1 protein_coding processed_transcript MGP_WSBEiJ_T0065194.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94290829 94297196 - Mysm1 protein_coding processed_transcript MGP_WSBEiJ_T0065195.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94308053 94322557 - Mysm1 protein_coding processed_transcript MGP_WSBEiJ_T0065196.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94309280 94322524 - Mysm1 protein_coding processed_transcript MGP_WSBEiJ_T0065197.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94309320 94314326 - Mysm1 protein_coding processed_transcript MGP_WSBEiJ_T0065198.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94309412 94322560 - Mysm1 protein_coding processed_transcript MGP_WSBEiJ_T0065199.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94313953 94322535 - Mysm1 protein_coding processed_transcript MGP_WSBEiJ_T0065200.1 MGP_WSBEiJ_G0027667.1 mouse_genomes_project 4 94316108 94322557 - Mysm1 protein_coding processed_transcript MGP_WSBEiJ_T0065285.1 MGP_WSBEiJ_G0027686.1 mouse_genomes_project 4 98182590 98247589 - MGP_WSBEiJ_P0065285 Kank4 protein_coding protein_coding MGP_WSBEiJ_T0065286.1 MGP_WSBEiJ_G0027686.1 mouse_genomes_project 4 98183999 98200045 - Kank4 protein_coding processed_transcript MGP_WSBEiJ_T0068396.1 MGP_WSBEiJ_G0028378.1 mouse_genomes_project 4 154844963 154938114 + Nphp4 protein_coding processed_transcript MGP_WSBEiJ_T0068397.1 MGP_WSBEiJ_G0028378.1 mouse_genomes_project 4 154846401 154938249 + MGP_WSBEiJ_P0068397 Nphp4 protein_coding protein_coding MGP_WSBEiJ_T0068398.1 MGP_WSBEiJ_G0028378.1 mouse_genomes_project 4 154846437 154858607 + Nphp4 protein_coding processed_transcript MGP_WSBEiJ_T0068399.1 MGP_WSBEiJ_G0028378.1 mouse_genomes_project 4 154852571 154938112 + MGP_WSBEiJ_P0068399 Nphp4 protein_coding protein_coding MGP_WSBEiJ_T0068400.1 MGP_WSBEiJ_G0028378.1 mouse_genomes_project 4 154856511 154866254 + Nphp4 protein_coding processed_transcript MGP_WSBEiJ_T0068401.1 MGP_WSBEiJ_G0028378.1 mouse_genomes_project 4 154870926 154888657 + Nphp4 protein_coding processed_transcript MGP_WSBEiJ_T0100837.1 MGP_WSBEiJ_G0039295.1 mouse_genomes_project 4 121646684 121649328 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0066972.1 MGP_WSBEiJ_G0028055.1 mouse_genomes_project 4 130976158 130976906 - Gm853 protein_coding processed_transcript MGP_WSBEiJ_T0066973.1 MGP_WSBEiJ_G0028055.1 mouse_genomes_project 4 130976158 130990204 - MGP_WSBEiJ_P0066973 Gm853 protein_coding protein_coding MGP_WSBEiJ_T0004339.1 MGP_WSBEiJ_G0003783.1 mouse_genomes_project 4 2965408 2970752 - 4930430E12Rik antisense antisense MGP_WSBEiJ_T0004340.1 MGP_WSBEiJ_G0003783.1 mouse_genomes_project 4 2966110 2970752 - 4930430E12Rik antisense antisense MGP_WSBEiJ_T0066584.1 MGP_WSBEiJ_G0027977.1 mouse_genomes_project 4 126485451 126494050 + MGP_WSBEiJ_P0066584 Mrps15 protein_coding protein_coding MGP_WSBEiJ_T0066585.1 MGP_WSBEiJ_G0027977.1 mouse_genomes_project 4 126485503 126490492 + Mrps15 protein_coding processed_transcript MGP_WSBEiJ_T0066586.1 MGP_WSBEiJ_G0027977.1 mouse_genomes_project 4 126485760 126489010 + Mrps15 protein_coding processed_transcript MGP_WSBEiJ_T0014228.1 MGP_WSBEiJ_G0012358.1 mouse_genomes_project 4 88726725 88729863 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066642.1 MGP_WSBEiJ_G0027989.1 mouse_genomes_project 4 126803006 126825661 - MGP_WSBEiJ_P0066642 Ago3 protein_coding protein_coding MGP_WSBEiJ_T0066643.1 MGP_WSBEiJ_G0027989.1 mouse_genomes_project 4 126805532 126919023 - MGP_WSBEiJ_P0066643 Ago3 protein_coding protein_coding MGP_WSBEiJ_T0066644.1 MGP_WSBEiJ_G0027989.1 mouse_genomes_project 4 126819904 126826243 - MGP_WSBEiJ_P0066644 Ago3 protein_coding protein_coding MGP_WSBEiJ_T0066645.1 MGP_WSBEiJ_G0027989.1 mouse_genomes_project 4 126854759 126890848 - Ago3 protein_coding processed_transcript MGP_WSBEiJ_T0066646.1 MGP_WSBEiJ_G0027989.1 mouse_genomes_project 4 126884510 126890889 - Ago3 protein_coding processed_transcript MGP_WSBEiJ_T0066647.1 MGP_WSBEiJ_G0027989.1 mouse_genomes_project 4 126894249 126919008 - Ago3 protein_coding processed_transcript MGP_WSBEiJ_T0067912.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143487489 143619737 - MGP_WSBEiJ_P0067912 Fhad1 protein_coding protein_coding MGP_WSBEiJ_T0067913.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143487902 143616314 - MGP_WSBEiJ_P0067913 Fhad1 protein_coding protein_coding MGP_WSBEiJ_T0067914.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143487902 143619747 - MGP_WSBEiJ_P0067914 Fhad1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067915.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143513874 143520007 - Fhad1 protein_coding processed_transcript MGP_WSBEiJ_T0067916.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143513874 143530722 - MGP_WSBEiJ_P0067916 Fhad1 protein_coding protein_coding MGP_WSBEiJ_T0067917.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143525999 143554169 - Fhad1 protein_coding processed_transcript MGP_WSBEiJ_T0067918.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143530415 143556287 - Fhad1 protein_coding processed_transcript MGP_WSBEiJ_T0067919.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143564894 143619752 - Fhad1 protein_coding retained_intron MGP_WSBEiJ_T0067920.1 MGP_WSBEiJ_G0028270.1 mouse_genomes_project 4 143618447 143619709 - Fhad1 protein_coding processed_transcript MGP_WSBEiJ_T0007693.1 MGP_WSBEiJ_G0006290.1 mouse_genomes_project 4 16886079 16895742 - 4930598A11Rik lincRNA lincRNA MGP_WSBEiJ_T0097057.1 MGP_WSBEiJ_G0035738.1 mouse_genomes_project 4 111371796 111371912 - n-R5s191 rRNA rRNA MGP_WSBEiJ_T0065534.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106837947 106849207 + Cyb5rl protein_coding retained_intron MGP_WSBEiJ_T0065535.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106837947 106856735 + MGP_WSBEiJ_P0065535 Cyb5rl protein_coding protein_coding MGP_WSBEiJ_T0065536.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106837955 106841875 + MGP_WSBEiJ_P0065536 Cyb5rl protein_coding protein_coding MGP_WSBEiJ_T0065537.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106837955 106858470 + MGP_WSBEiJ_P0065537 Cyb5rl protein_coding protein_coding MGP_WSBEiJ_T0065538.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106837978 106859177 + MGP_WSBEiJ_P0065538 Cyb5rl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065539.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106837983 106841891 + MGP_WSBEiJ_P0065539 Cyb5rl protein_coding protein_coding MGP_WSBEiJ_T0065540.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106839564 106856735 + MGP_WSBEiJ_P0065540 Cyb5rl protein_coding protein_coding MGP_WSBEiJ_T0065541.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106839602 106858900 + MGP_WSBEiJ_P0065541 Cyb5rl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065542.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106841127 106855713 + MGP_WSBEiJ_P0065542 Cyb5rl protein_coding protein_coding MGP_WSBEiJ_T0065543.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106841829 106855248 + MGP_WSBEiJ_P0065543 Cyb5rl protein_coding protein_coding MGP_WSBEiJ_T0065544.1 MGP_WSBEiJ_G0027743.1 mouse_genomes_project 4 106851953 106858686 + MGP_WSBEiJ_P0065544 Cyb5rl protein_coding protein_coding MGP_WSBEiJ_T0007760.1 MGP_WSBEiJ_G0006348.1 mouse_genomes_project 4 82398631 82407748 + Gm11184 lincRNA lincRNA MGP_WSBEiJ_T0014165.1 MGP_WSBEiJ_G0012295.1 mouse_genomes_project 4 62124786 62125033 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011381.1 MGP_WSBEiJ_G0009538.1 mouse_genomes_project 4 116807081 116807348 + Gm25435 misc_RNA misc_RNA MGP_WSBEiJ_T0097391.1 MGP_WSBEiJ_G0036065.1 mouse_genomes_project 4 82768574 82769053 + Gm26968 sense_intronic sense_intronic MGP_WSBEiJ_T0004364.1 MGP_WSBEiJ_G0003802.1 mouse_genomes_project 4 39175942 39176835 + Gm12405 antisense antisense MGP_WSBEiJ_T0014093.1 MGP_WSBEiJ_G0012223.1 mouse_genomes_project 4 32682038 32682472 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065932.1 MGP_WSBEiJ_G0027820.1 mouse_genomes_project 4 115704528 115708085 + MGP_WSBEiJ_P0065932 Kncn protein_coding protein_coding MGP_WSBEiJ_T0065933.1 MGP_WSBEiJ_G0027820.1 mouse_genomes_project 4 115705999 115709647 + Kncn protein_coding processed_transcript MGP_WSBEiJ_T0068010.1 MGP_WSBEiJ_G0028307.1 mouse_genomes_project 4 149978734 149980152 + MGP_WSBEiJ_P0068010 Nppb protein_coding protein_coding MGP_WSBEiJ_T0007728.1 MGP_WSBEiJ_G0006321.1 mouse_genomes_project 4 52803720 52804191 - Gm29067 lincRNA lincRNA MGP_WSBEiJ_T0004432.1 MGP_WSBEiJ_G0003851.1 mouse_genomes_project 4 116414282 116415194 + Gm12953 antisense antisense MGP_WSBEiJ_T0063922.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 33002368 33151072 - MGP_WSBEiJ_P0063922 Lingo2 protein_coding protein_coding MGP_WSBEiJ_T0063923.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 33003127 34318968 - MGP_WSBEiJ_P0063923 Lingo2 protein_coding protein_coding MGP_WSBEiJ_T0063924.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 33003127 33450992 - MGP_WSBEiJ_P0063924 Lingo2 protein_coding protein_coding MGP_WSBEiJ_T0063925.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 33003127 33151072 - MGP_WSBEiJ_P0063925 Lingo2 protein_coding protein_coding MGP_WSBEiJ_T0063926.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 33003564 33358263 - MGP_WSBEiJ_P0063926 Lingo2 protein_coding protein_coding MGP_WSBEiJ_T0063927.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 33358260 34318231 - Lingo2 protein_coding processed_transcript MGP_WSBEiJ_T0063928.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 34068275 34319489 - Lingo2 protein_coding processed_transcript MGP_WSBEiJ_T0063929.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 34071012 34318212 - Lingo2 protein_coding processed_transcript MGP_WSBEiJ_T0063930.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 34071257 34318234 - Lingo2 protein_coding processed_transcript MGP_WSBEiJ_T0063931.1 MGP_WSBEiJ_G0027368.1 mouse_genomes_project 4 34318844 34319492 - Lingo2 protein_coding processed_transcript MGP_WSBEiJ_T0063992.1 MGP_WSBEiJ_G0027385.1 mouse_genomes_project 4 38618123 38628133 - MGP_WSBEiJ_P0063992 Nol6 protein_coding protein_coding MGP_WSBEiJ_T0063993.1 MGP_WSBEiJ_G0027385.1 mouse_genomes_project 4 38625019 38626988 - Nol6 protein_coding processed_transcript MGP_WSBEiJ_T0063994.1 MGP_WSBEiJ_G0027385.1 mouse_genomes_project 4 38625235 38627223 - Nol6 protein_coding processed_transcript MGP_WSBEiJ_T0063995.1 MGP_WSBEiJ_G0027385.1 mouse_genomes_project 4 38625567 38626443 - Nol6 protein_coding processed_transcript MGP_WSBEiJ_T0066554.1 MGP_WSBEiJ_G0027968.1 mouse_genomes_project 4 125283156 125301021 - MGP_WSBEiJ_P0066554 Cdca8 protein_coding protein_coding MGP_WSBEiJ_T0066555.1 MGP_WSBEiJ_G0027968.1 mouse_genomes_project 4 125283802 125300977 - MGP_WSBEiJ_P0066555 Cdca8 protein_coding protein_coding MGP_WSBEiJ_T0066556.1 MGP_WSBEiJ_G0027968.1 mouse_genomes_project 4 125284247 125300511 - Cdca8 protein_coding processed_transcript MGP_WSBEiJ_T0066557.1 MGP_WSBEiJ_G0027968.1 mouse_genomes_project 4 125288318 125300885 - Cdca8 protein_coding processed_transcript MGP_WSBEiJ_T0066558.1 MGP_WSBEiJ_G0027968.1 mouse_genomes_project 4 125288498 125300946 - Cdca8 protein_coding retained_intron MGP_WSBEiJ_T0066559.1 MGP_WSBEiJ_G0027968.1 mouse_genomes_project 4 125292480 125303415 - MGP_WSBEiJ_P0066559 Cdca8 protein_coding protein_coding MGP_WSBEiJ_T0007672.1 MGP_WSBEiJ_G0006275.1 mouse_genomes_project 4 2188550 2194536 - Gm11782 lincRNA lincRNA MGP_WSBEiJ_T0066826.1 MGP_WSBEiJ_G0028030.1 mouse_genomes_project 4 130022477 130047871 - MGP_WSBEiJ_P0066826 Zbtb8a protein_coding protein_coding MGP_WSBEiJ_T0014355.1 MGP_WSBEiJ_G0012485.1 mouse_genomes_project 4 130476006 130476295 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014087.1 MGP_WSBEiJ_G0012217.1 mouse_genomes_project 4 31641587 31642398 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010431.1 MGP_WSBEiJ_G0008588.1 mouse_genomes_project 4 87364430 87364516 + Mir491 miRNA miRNA MGP_WSBEiJ_T0064036.1 MGP_WSBEiJ_G0027395.1 mouse_genomes_project 4 39103278 39171916 + MGP_WSBEiJ_P0064036 Dnaic1 protein_coding protein_coding MGP_WSBEiJ_T0064037.1 MGP_WSBEiJ_G0027395.1 mouse_genomes_project 4 39165400 39171916 + Dnaic1 protein_coding retained_intron MGP_WSBEiJ_T0064038.1 MGP_WSBEiJ_G0027395.1 mouse_genomes_project 4 39167104 39171916 + MGP_WSBEiJ_P0064038 Dnaic1 protein_coding protein_coding MGP_WSBEiJ_T0067980.1 MGP_WSBEiJ_G0028298.1 mouse_genomes_project 4 147032174 147064170 - MGP_WSBEiJ_P0067980 Tnfrsf1b protein_coding protein_coding MGP_WSBEiJ_T0067981.1 MGP_WSBEiJ_G0028298.1 mouse_genomes_project 4 147044056 147064170 - MGP_WSBEiJ_P0067981 Tnfrsf1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067751.1 MGP_WSBEiJ_G0028232.1 mouse_genomes_project 4 141493676 141728229 - MGP_WSBEiJ_P0067751 Igsf21 protein_coding protein_coding MGP_WSBEiJ_T0100814.1 MGP_WSBEiJ_G0039272.1 mouse_genomes_project 4 87814566 87816254 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0067366.1 MGP_WSBEiJ_G0028139.1 mouse_genomes_project 4 135536810 135688561 - MGP_WSBEiJ_P0067366 Man1c1 protein_coding protein_coding MGP_WSBEiJ_T0067367.1 MGP_WSBEiJ_G0028139.1 mouse_genomes_project 4 135536810 135688561 - MGP_WSBEiJ_P0067367 Man1c1 protein_coding protein_coding MGP_WSBEiJ_T0067368.1 MGP_WSBEiJ_G0028139.1 mouse_genomes_project 4 135542956 135688038 - Man1c1 protein_coding retained_intron MGP_WSBEiJ_T0068060.1 MGP_WSBEiJ_G0028320.1 mouse_genomes_project 4 150553785 150559082 - MGP_WSBEiJ_P0068060 Angptl7 protein_coding protein_coding MGP_WSBEiJ_T0068638.1 MGP_WSBEiJ_G0028422.1 mouse_genomes_project 4 158382891 158385625 + MGP_WSBEiJ_P0068638 Ankrd65 protein_coding protein_coding MGP_WSBEiJ_T0068639.1 MGP_WSBEiJ_G0028422.1 mouse_genomes_project 4 158383624 158392506 + MGP_WSBEiJ_P0068639 Ankrd65 protein_coding protein_coding MGP_WSBEiJ_T0068070.1 MGP_WSBEiJ_G0028322.1 mouse_genomes_project 4 150655109 150658232 + MGP_WSBEiJ_P0068070 Srm protein_coding protein_coding MGP_WSBEiJ_T0068071.1 MGP_WSBEiJ_G0028322.1 mouse_genomes_project 4 150655523 150657812 + Srm protein_coding retained_intron MGP_WSBEiJ_T0068072.1 MGP_WSBEiJ_G0028322.1 mouse_genomes_project 4 150657506 150658606 + Srm protein_coding processed_transcript MGP_WSBEiJ_T0063520.1 MGP_WSBEiJ_G0027270.1 mouse_genomes_project 4 3301696 3609856 - MGP_WSBEiJ_P0063520 Tox protein_coding protein_coding MGP_WSBEiJ_T0063521.1 MGP_WSBEiJ_G0027270.1 mouse_genomes_project 4 3303370 3304673 - Tox protein_coding processed_transcript MGP_WSBEiJ_T0063522.1 MGP_WSBEiJ_G0027270.1 mouse_genomes_project 4 3355495 3610614 - Tox protein_coding retained_intron MGP_WSBEiJ_T0063523.1 MGP_WSBEiJ_G0027270.1 mouse_genomes_project 4 3440659 3609546 - Tox protein_coding retained_intron MGP_WSBEiJ_T0004508.1 MGP_WSBEiJ_G0003911.1 mouse_genomes_project 4 150647725 150649008 - Gm13209 antisense antisense MGP_WSBEiJ_T0098303.1 MGP_WSBEiJ_G0036966.1 mouse_genomes_project 4 134699892 134700040 - Gm25270 snRNA snRNA MGP_WSBEiJ_T0063814.1 MGP_WSBEiJ_G0027341.1 mouse_genomes_project 4 29785152 29801471 + Casp8ap2 protein_coding processed_transcript MGP_WSBEiJ_T0063815.1 MGP_WSBEiJ_G0027341.1 mouse_genomes_project 4 29785171 29809275 + Casp8ap2 protein_coding processed_transcript MGP_WSBEiJ_T0063816.1 MGP_WSBEiJ_G0027341.1 mouse_genomes_project 4 29785174 29823931 + MGP_WSBEiJ_P0063816 Casp8ap2 protein_coding protein_coding MGP_WSBEiJ_T0063817.1 MGP_WSBEiJ_G0027341.1 mouse_genomes_project 4 29785179 29823931 + MGP_WSBEiJ_P0063817 Casp8ap2 protein_coding protein_coding MGP_WSBEiJ_T0063818.1 MGP_WSBEiJ_G0027341.1 mouse_genomes_project 4 29793714 29823931 + MGP_WSBEiJ_P0063818 Casp8ap2 protein_coding protein_coding MGP_WSBEiJ_T0004396.1 MGP_WSBEiJ_G0003830.1 mouse_genomes_project 4 94406222 94425421 + Junos antisense antisense MGP_WSBEiJ_T0004397.1 MGP_WSBEiJ_G0003830.1 mouse_genomes_project 4 94407622 94416949 + Junos antisense antisense MGP_WSBEiJ_T0004398.1 MGP_WSBEiJ_G0003830.1 mouse_genomes_project 4 94407911 94521323 + Junos antisense antisense MGP_WSBEiJ_T0004399.1 MGP_WSBEiJ_G0003830.1 mouse_genomes_project 4 94434989 94518512 + Junos antisense antisense MGP_WSBEiJ_T0004400.1 MGP_WSBEiJ_G0003830.1 mouse_genomes_project 4 94435136 94497170 + Junos antisense antisense MGP_WSBEiJ_T0004401.1 MGP_WSBEiJ_G0003830.1 mouse_genomes_project 4 94452835 94524456 + Junos antisense antisense MGP_WSBEiJ_T0004402.1 MGP_WSBEiJ_G0003830.1 mouse_genomes_project 4 94459328 94529122 + Junos antisense antisense MGP_WSBEiJ_T0004403.1 MGP_WSBEiJ_G0003830.1 mouse_genomes_project 4 94481513 94530507 + Junos antisense antisense MGP_WSBEiJ_T0014304.1 MGP_WSBEiJ_G0012434.1 mouse_genomes_project 4 115899856 115900115 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064992.1 MGP_WSBEiJ_G0027614.1 mouse_genomes_project 4 81913001 82076440 - MGP_WSBEiJ_P0064992 Frem1 protein_coding protein_coding MGP_WSBEiJ_T0064993.1 MGP_WSBEiJ_G0027614.1 mouse_genomes_project 4 81913008 82043199 - MGP_WSBEiJ_P0064993 Frem1 protein_coding protein_coding MGP_WSBEiJ_T0064994.1 MGP_WSBEiJ_G0027614.1 mouse_genomes_project 4 81913008 82076612 - MGP_WSBEiJ_P0064994 Frem1 protein_coding protein_coding MGP_WSBEiJ_T0064995.1 MGP_WSBEiJ_G0027614.1 mouse_genomes_project 4 81915645 81929636 - Frem1 protein_coding processed_transcript MGP_WSBEiJ_T0064996.1 MGP_WSBEiJ_G0027614.1 mouse_genomes_project 4 81930834 81940005 - Frem1 protein_coding retained_intron MGP_WSBEiJ_T0064997.1 MGP_WSBEiJ_G0027614.1 mouse_genomes_project 4 81953793 81958561 - Frem1 protein_coding retained_intron MGP_WSBEiJ_T0064998.1 MGP_WSBEiJ_G0027614.1 mouse_genomes_project 4 81956106 81991212 - MGP_WSBEiJ_P0064998 Frem1 protein_coding protein_coding MGP_WSBEiJ_T0064999.1 MGP_WSBEiJ_G0027614.1 mouse_genomes_project 4 82013281 82076612 - Frem1 protein_coding processed_transcript MGP_WSBEiJ_T0004415.1 MGP_WSBEiJ_G0003840.1 mouse_genomes_project 4 106784953 106789517 - Gm12786 antisense antisense MGP_WSBEiJ_T0005543.1 MGP_WSBEiJ_G0004666.1 mouse_genomes_project 4 107593658 107602526 - Lrp8os3 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0068118.1 MGP_WSBEiJ_G0028330.1 mouse_genomes_project 4 151234612 151244670 - MGP_WSBEiJ_P0068118 Apitd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068119.1 MGP_WSBEiJ_G0028330.1 mouse_genomes_project 4 151235945 151244691 - MGP_WSBEiJ_P0068119 Apitd1 protein_coding protein_coding MGP_WSBEiJ_T0068120.1 MGP_WSBEiJ_G0028330.1 mouse_genomes_project 4 151235952 151237862 - Apitd1 protein_coding retained_intron MGP_WSBEiJ_T0068121.1 MGP_WSBEiJ_G0028330.1 mouse_genomes_project 4 151236178 151244645 - MGP_WSBEiJ_P0068121 Apitd1 protein_coding protein_coding MGP_WSBEiJ_T0068122.1 MGP_WSBEiJ_G0028330.1 mouse_genomes_project 4 151238775 151244699 - MGP_WSBEiJ_P0068122 Apitd1 protein_coding protein_coding MGP_WSBEiJ_T0014189.1 MGP_WSBEiJ_G0012319.1 mouse_genomes_project 4 73414713 73415366 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067555.1 MGP_WSBEiJ_G0028184.1 mouse_genomes_project 4 138126086 138194859 - MGP_WSBEiJ_P0067555 Zbtb40 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067556.1 MGP_WSBEiJ_G0028184.1 mouse_genomes_project 4 138126089 138194764 - MGP_WSBEiJ_P0067556 Zbtb40 protein_coding protein_coding MGP_WSBEiJ_T0067557.1 MGP_WSBEiJ_G0028184.1 mouse_genomes_project 4 138160529 138194870 - Zbtb40 protein_coding retained_intron MGP_WSBEiJ_T0007785.1 MGP_WSBEiJ_G0006371.1 mouse_genomes_project 4 100884798 100895684 - E130102H24Rik lincRNA lincRNA MGP_WSBEiJ_T0007787.1 MGP_WSBEiJ_G0006371.1 mouse_genomes_project 4 100895477 100896171 - E130102H24Rik lincRNA lincRNA MGP_WSBEiJ_T0004490.1 MGP_WSBEiJ_G0003899.1 mouse_genomes_project 4 142819674 142825803 - Gm13055 antisense antisense MGP_WSBEiJ_T0064880.1 MGP_WSBEiJ_G0027587.1 mouse_genomes_project 4 62297025 62314977 - MGP_WSBEiJ_P0064880 Tnfsf15 protein_coding protein_coding MGP_WSBEiJ_T0014270.1 MGP_WSBEiJ_G0012400.1 mouse_genomes_project 4 103166477 103167831 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014187.1 MGP_WSBEiJ_G0012317.1 mouse_genomes_project 4 72776448 72777244 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066273.1 MGP_WSBEiJ_G0027893.1 mouse_genomes_project 4 118898835 118899927 + MGP_WSBEiJ_P0066273 Olfr1330 protein_coding protein_coding MGP_WSBEiJ_T0065460.1 MGP_WSBEiJ_G0027723.1 mouse_genomes_project 4 104492429 104547645 - MGP_WSBEiJ_P0065460 C8a protein_coding protein_coding MGP_WSBEiJ_T0065461.1 MGP_WSBEiJ_G0027723.1 mouse_genomes_project 4 104492431 104547603 - MGP_WSBEiJ_P0065461 C8a protein_coding protein_coding MGP_WSBEiJ_T0010435.1 MGP_WSBEiJ_G0008592.1 mouse_genomes_project 4 97973095 97973229 - Gm22625 miRNA miRNA MGP_WSBEiJ_T0014105.1 MGP_WSBEiJ_G0012235.1 mouse_genomes_project 4 37362455 37363410 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017520.1 MGP_WSBEiJ_G0015006.1 mouse_genomes_project 4 157481065 157481974 - Gm20421 processed_transcript processed_transcript MGP_WSBEiJ_T0014106.1 MGP_WSBEiJ_G0012236.1 mouse_genomes_project 4 37532054 37535410 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014163.1 MGP_WSBEiJ_G0012293.1 mouse_genomes_project 4 61439528 61439783 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014166.1 MGP_WSBEiJ_G0012296.1 mouse_genomes_project 4 63469201 63470414 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066027.1 MGP_WSBEiJ_G0027839.1 mouse_genomes_project 4 116503731 116520846 - MGP_WSBEiJ_P0066027 Akr1a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0066028.1 MGP_WSBEiJ_G0027839.1 mouse_genomes_project 4 116503739 116520857 - MGP_WSBEiJ_P0066028 Akr1a1 protein_coding protein_coding MGP_WSBEiJ_T0066029.1 MGP_WSBEiJ_G0027839.1 mouse_genomes_project 4 116503740 116520573 - Akr1a1 protein_coding processed_transcript MGP_WSBEiJ_T0066030.1 MGP_WSBEiJ_G0027839.1 mouse_genomes_project 4 116503740 116505233 - Akr1a1 protein_coding processed_transcript MGP_WSBEiJ_T0066031.1 MGP_WSBEiJ_G0027839.1 mouse_genomes_project 4 116506320 116518648 - MGP_WSBEiJ_P0066031 Akr1a1 protein_coding protein_coding MGP_WSBEiJ_T0064684.1 MGP_WSBEiJ_G0027536.1 mouse_genomes_project 4 56020080 56168997 + protein_coding processed_transcript MGP_WSBEiJ_T0064685.1 MGP_WSBEiJ_G0027536.1 mouse_genomes_project 4 56054650 56215101 + MGP_WSBEiJ_P0064685 protein_coding protein_coding MGP_WSBEiJ_T0064686.1 MGP_WSBEiJ_G0027536.1 mouse_genomes_project 4 56089258 56167277 + MGP_WSBEiJ_P0064686 protein_coding protein_coding MGP_WSBEiJ_T0064687.1 MGP_WSBEiJ_G0027536.1 mouse_genomes_project 4 56140663 56167124 + MGP_WSBEiJ_P0064687 protein_coding protein_coding MGP_WSBEiJ_T0066526.1 MGP_WSBEiJ_G0027961.1 mouse_genomes_project 4 125065962 125084639 + MGP_WSBEiJ_P0066526 Sf3a3 protein_coding protein_coding MGP_WSBEiJ_T0066527.1 MGP_WSBEiJ_G0027961.1 mouse_genomes_project 4 125066069 125069906 + Sf3a3 protein_coding processed_transcript MGP_WSBEiJ_T0066528.1 MGP_WSBEiJ_G0027961.1 mouse_genomes_project 4 125073828 125075478 + Sf3a3 protein_coding processed_transcript MGP_WSBEiJ_T0066267.1 MGP_WSBEiJ_G0027889.1 mouse_genomes_project 4 118753738 118754775 - MGP_WSBEiJ_P0066267 Olfr1337 protein_coding protein_coding MGP_WSBEiJ_T0014374.1 MGP_WSBEiJ_G0012504.1 mouse_genomes_project 4 137410815 137411338 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007714.1 MGP_WSBEiJ_G0006311.1 mouse_genomes_project 4 42684943 42689467 + Gm12678 lincRNA lincRNA MGP_WSBEiJ_T0066668.1 MGP_WSBEiJ_G0027996.1 mouse_genomes_project 4 127255925 127265614 - MGP_WSBEiJ_P0066668 Ncdn protein_coding protein_coding MGP_WSBEiJ_T0066669.1 MGP_WSBEiJ_G0027996.1 mouse_genomes_project 4 127256906 127265643 - Ncdn protein_coding processed_transcript MGP_WSBEiJ_T0066670.1 MGP_WSBEiJ_G0027996.1 mouse_genomes_project 4 127256906 127265632 - MGP_WSBEiJ_P0066670 Ncdn protein_coding protein_coding MGP_WSBEiJ_T0068425.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156488564 156493723 - MGP_WSBEiJ_P0068425 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068426.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156488682 156494019 - MGP_WSBEiJ_P0068426 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068427.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156488682 156494073 - MGP_WSBEiJ_P0068427 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068428.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156489550 156494337 - MGP_WSBEiJ_P0068428 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068429.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156489555 156494259 - MGP_WSBEiJ_P0068429 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068430.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156491416 156494043 - MGP_WSBEiJ_P0068430 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068431.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156491416 156493974 - MGP_WSBEiJ_P0068431 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068432.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156491416 156493723 - MGP_WSBEiJ_P0068432 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068433.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156491417 156492462 - MGP_WSBEiJ_P0068433 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068434.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156491417 156494257 - MGP_WSBEiJ_P0068434 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068435.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156491687 156494144 - MGP_WSBEiJ_P0068435 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068436.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156491805 156493770 - MGP_WSBEiJ_P0068436 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068437.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156491830 156492430 - MGP_WSBEiJ_P0068437 Smim1 protein_coding protein_coding MGP_WSBEiJ_T0068438.1 MGP_WSBEiJ_G0028384.1 mouse_genomes_project 4 156493412 156494019 - Smim1 protein_coding processed_transcript MGP_WSBEiJ_T0066270.1 MGP_WSBEiJ_G0027892.1 mouse_genomes_project 4 118877400 118879378 + MGP_WSBEiJ_P0066270 protein_coding protein_coding MGP_WSBEiJ_T0066272.1 MGP_WSBEiJ_G0027892.1 mouse_genomes_project 4 118877769 118879378 + MGP_WSBEiJ_P0066272 protein_coding protein_coding MGP_WSBEiJ_T0066473.1 MGP_WSBEiJ_G0027945.1 mouse_genomes_project 4 123451491 123468374 + MGP_WSBEiJ_P0066473 Nt5c1a protein_coding protein_coding MGP_WSBEiJ_T0067302.1 MGP_WSBEiJ_G0028123.1 mouse_genomes_project 4 135155565 135173374 - MGP_WSBEiJ_P0067302 Catsper4 protein_coding protein_coding MGP_WSBEiJ_T0067303.1 MGP_WSBEiJ_G0028123.1 mouse_genomes_project 4 135155565 135173374 - MGP_WSBEiJ_P0067303 Catsper4 protein_coding protein_coding MGP_WSBEiJ_T0067304.1 MGP_WSBEiJ_G0028123.1 mouse_genomes_project 4 135171540 135173363 - MGP_WSBEiJ_P0067304 Catsper4 protein_coding protein_coding MGP_WSBEiJ_T0067305.1 MGP_WSBEiJ_G0028123.1 mouse_genomes_project 4 135172488 135173341 - Catsper4 protein_coding processed_transcript MGP_WSBEiJ_T0066979.1 MGP_WSBEiJ_G0028057.1 mouse_genomes_project 4 131082550 131083063 - MGP_WSBEiJ_P0066979 Gm10570 protein_coding protein_coding MGP_WSBEiJ_T0014172.1 MGP_WSBEiJ_G0012302.1 mouse_genomes_project 4 66973176 66975221 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004453.1 MGP_WSBEiJ_G0003868.1 mouse_genomes_project 4 124866694 125005269 - Gm27247 antisense antisense MGP_WSBEiJ_T0011357.1 MGP_WSBEiJ_G0009514.1 mouse_genomes_project 4 15584545 15584876 - Gm24419 misc_RNA misc_RNA MGP_WSBEiJ_T0004467.1 MGP_WSBEiJ_G0003879.1 mouse_genomes_project 4 131462944 131464864 - Gm26716 antisense antisense MGP_WSBEiJ_T0066815.1 MGP_WSBEiJ_G0028027.1 mouse_genomes_project 4 129950343 129971955 + MGP_WSBEiJ_P0066815 Sync protein_coding protein_coding MGP_WSBEiJ_T0066816.1 MGP_WSBEiJ_G0028027.1 mouse_genomes_project 4 129950357 129970758 + Sync protein_coding retained_intron MGP_WSBEiJ_T0064690.1 MGP_WSBEiJ_G0027538.1 mouse_genomes_project 4 56264208 56277213 - MGP_WSBEiJ_P0064690 Txn1 protein_coding protein_coding MGP_WSBEiJ_T0067885.1 MGP_WSBEiJ_G0028261.1 mouse_genomes_project 4 143215634 143253534 - MGP_WSBEiJ_P0067885 Plekhm2 protein_coding protein_coding MGP_WSBEiJ_T0067886.1 MGP_WSBEiJ_G0028261.1 mouse_genomes_project 4 143215634 143254315 - MGP_WSBEiJ_P0067886 Plekhm2 protein_coding protein_coding MGP_WSBEiJ_T0067887.1 MGP_WSBEiJ_G0028261.1 mouse_genomes_project 4 143218233 143219432 - Plekhm2 protein_coding retained_intron MGP_WSBEiJ_T0067888.1 MGP_WSBEiJ_G0028261.1 mouse_genomes_project 4 143220342 143220943 - Plekhm2 protein_coding retained_intron MGP_WSBEiJ_T0067889.1 MGP_WSBEiJ_G0028261.1 mouse_genomes_project 4 143222377 143232035 - Plekhm2 protein_coding retained_intron MGP_WSBEiJ_T0067890.1 MGP_WSBEiJ_G0028261.1 mouse_genomes_project 4 143231156 143232602 - Plekhm2 protein_coding retained_intron MGP_WSBEiJ_T0099495.1 MGP_WSBEiJ_G0038158.1 mouse_genomes_project 4 1368960 1369092 + Gm26436 snoRNA snoRNA MGP_WSBEiJ_T0017479.1 MGP_WSBEiJ_G0014983.1 mouse_genomes_project 4 97130375 97134123 - Gm12676 processed_transcript processed_transcript MGP_WSBEiJ_T0007867.1 MGP_WSBEiJ_G0006428.1 mouse_genomes_project 4 136674135 136677679 + 1700029M20Rik lincRNA lincRNA MGP_WSBEiJ_T0007868.1 MGP_WSBEiJ_G0006428.1 mouse_genomes_project 4 136674254 136675966 + 1700029M20Rik lincRNA lincRNA MGP_WSBEiJ_T0007869.1 MGP_WSBEiJ_G0006428.1 mouse_genomes_project 4 136674298 136675966 + 1700029M20Rik lincRNA lincRNA MGP_WSBEiJ_T0007870.1 MGP_WSBEiJ_G0006428.1 mouse_genomes_project 4 136674733 136675466 + 1700029M20Rik lincRNA lincRNA MGP_WSBEiJ_T0065268.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97809378 97821291 + Inadl protein_coding processed_transcript MGP_WSBEiJ_T0065269.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97809384 98144121 + MGP_WSBEiJ_P0065269 Inadl protein_coding protein_coding MGP_WSBEiJ_T0065270.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97809448 97970009 + MGP_WSBEiJ_P0065270 Inadl protein_coding protein_coding MGP_WSBEiJ_T0065271.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97809448 98095732 + MGP_WSBEiJ_P0065271 Inadl protein_coding protein_coding MGP_WSBEiJ_T0065272.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97809485 97876570 + MGP_WSBEiJ_P0065272 Inadl protein_coding protein_coding MGP_WSBEiJ_T0065273.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97834722 97850502 + Inadl protein_coding processed_transcript MGP_WSBEiJ_T0065274.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97855583 97861670 + Inadl protein_coding processed_transcript MGP_WSBEiJ_T0065275.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97861608 97920526 + MGP_WSBEiJ_P0065275 Inadl protein_coding protein_coding MGP_WSBEiJ_T0065276.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97870960 98142876 + MGP_WSBEiJ_P0065276 Inadl protein_coding protein_coding MGP_WSBEiJ_T0065277.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97917950 97930957 + Inadl protein_coding processed_transcript MGP_WSBEiJ_T0065278.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97941416 97954563 + MGP_WSBEiJ_P0065278 Inadl protein_coding protein_coding MGP_WSBEiJ_T0065279.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97962092 98144121 + MGP_WSBEiJ_P0065279 Inadl protein_coding protein_coding MGP_WSBEiJ_T0065280.1 MGP_WSBEiJ_G0027684.1 mouse_genomes_project 4 97962331 98111035 + MGP_WSBEiJ_P0065280 Inadl protein_coding protein_coding MGP_WSBEiJ_T0100826.1 MGP_WSBEiJ_G0039284.1 mouse_genomes_project 4 101447398 101449343 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001394.1 MGP_WSBEiJ_G0001322.1 mouse_genomes_project 4 154212893 154213315 - TEC TEC MGP_WSBEiJ_T0014336.1 MGP_WSBEiJ_G0012466.1 mouse_genomes_project 4 123712707 123713025 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068340.1 MGP_WSBEiJ_G0028369.1 mouse_genomes_project 4 154498453 154502055 + MGP_WSBEiJ_P0068340 Hes2 protein_coding protein_coding MGP_WSBEiJ_T0068341.1 MGP_WSBEiJ_G0028369.1 mouse_genomes_project 4 154499135 154500186 + Hes2 protein_coding processed_transcript MGP_WSBEiJ_T0066696.1 MGP_WSBEiJ_G0028000.1 mouse_genomes_project 4 127575714 127590587 - MGP_WSBEiJ_P0066696 Zmym1 protein_coding protein_coding MGP_WSBEiJ_T0066697.1 MGP_WSBEiJ_G0028000.1 mouse_genomes_project 4 127576213 127587284 - MGP_WSBEiJ_P0066697 Zmym1 protein_coding protein_coding MGP_WSBEiJ_T0066698.1 MGP_WSBEiJ_G0028000.1 mouse_genomes_project 4 127576262 127590495 - Zmym1 protein_coding processed_transcript MGP_WSBEiJ_T0066699.1 MGP_WSBEiJ_G0028000.1 mouse_genomes_project 4 127576262 127590559 - MGP_WSBEiJ_P0066699 Zmym1 protein_coding protein_coding MGP_WSBEiJ_T0066700.1 MGP_WSBEiJ_G0028000.1 mouse_genomes_project 4 127576262 127590587 - MGP_WSBEiJ_P0066700 Zmym1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0066701.1 MGP_WSBEiJ_G0028000.1 mouse_genomes_project 4 127577285 127587179 - Zmym1 protein_coding processed_transcript MGP_WSBEiJ_T0066702.1 MGP_WSBEiJ_G0028000.1 mouse_genomes_project 4 127582908 127585905 - Zmym1 protein_coding processed_transcript MGP_WSBEiJ_T0066703.1 MGP_WSBEiJ_G0028000.1 mouse_genomes_project 4 127582947 127590521 - MGP_WSBEiJ_P0066703 Zmym1 protein_coding protein_coding MGP_WSBEiJ_T0014022.1 MGP_WSBEiJ_G0012152.1 mouse_genomes_project 4 12311467 12311922 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064777.1 MGP_WSBEiJ_G0027562.1 mouse_genomes_project 4 60764886 60776406 + MGP_WSBEiJ_P0064777 Slc31a2 protein_coding protein_coding MGP_WSBEiJ_T0066915.1 MGP_WSBEiJ_G0028046.1 mouse_genomes_project 4 130377563 130399999 - MGP_WSBEiJ_P0066915 Tmem39b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066916.1 MGP_WSBEiJ_G0028046.1 mouse_genomes_project 4 130377563 130400041 - MGP_WSBEiJ_P0066916 Tmem39b protein_coding protein_coding MGP_WSBEiJ_T0066917.1 MGP_WSBEiJ_G0028046.1 mouse_genomes_project 4 130377807 130380145 - Tmem39b protein_coding retained_intron MGP_WSBEiJ_T0066918.1 MGP_WSBEiJ_G0028046.1 mouse_genomes_project 4 130394384 130399823 - MGP_WSBEiJ_P0066918 Tmem39b protein_coding protein_coding MGP_WSBEiJ_T0066919.1 MGP_WSBEiJ_G0028046.1 mouse_genomes_project 4 130394460 130399947 - MGP_WSBEiJ_P0066919 Tmem39b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014269.1 MGP_WSBEiJ_G0012399.1 mouse_genomes_project 4 102710604 102710820 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017448.1 MGP_WSBEiJ_G0014962.1 mouse_genomes_project 4 32179947 32185305 - Platr9 processed_transcript processed_transcript MGP_WSBEiJ_T0017449.1 MGP_WSBEiJ_G0014962.1 mouse_genomes_project 4 32183612 32185305 - Platr9 processed_transcript processed_transcript MGP_WSBEiJ_T0068249.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153154903 154154330 - MGP_WSBEiJ_P0068249 Camta1 protein_coding protein_coding MGP_WSBEiJ_T0068267.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153300413 154154537 - MGP_WSBEiJ_P0068267 Camta1 protein_coding protein_coding MGP_WSBEiJ_T0068268.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153300414 154154407 - MGP_WSBEiJ_P0068268 Camta1 protein_coding protein_coding MGP_WSBEiJ_T0068269.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153300414 153320711 - MGP_WSBEiJ_P0068269 Camta1 protein_coding protein_coding MGP_WSBEiJ_T0068270.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153300702 153371453 - MGP_WSBEiJ_P0068270 Camta1 protein_coding protein_coding MGP_WSBEiJ_T0068271.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153300702 153350580 - MGP_WSBEiJ_P0068271 Camta1 protein_coding protein_coding MGP_WSBEiJ_T0068272.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153326958 153381514 - Camta1 protein_coding processed_transcript MGP_WSBEiJ_T0068273.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153327043 153350307 - MGP_WSBEiJ_P0068273 Camta1 protein_coding protein_coding MGP_WSBEiJ_T0068275.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 153736429 154154311 - Camta1 protein_coding processed_transcript MGP_WSBEiJ_T0068276.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 154080122 154154365 - Camta1 protein_coding processed_transcript MGP_WSBEiJ_T0068277.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 154081788 154154399 - Camta1 protein_coding processed_transcript MGP_WSBEiJ_T0068278.1 MGP_WSBEiJ_G0028354.1 mouse_genomes_project 4 154082052 154154330 - MGP_WSBEiJ_P0068278 Camta1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099566.1 MGP_WSBEiJ_G0038229.1 mouse_genomes_project 4 131498144 131498274 - Gm22660 snoRNA snoRNA MGP_WSBEiJ_T0014066.1 MGP_WSBEiJ_G0012196.1 mouse_genomes_project 4 25401889 25402896 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010436.1 MGP_WSBEiJ_G0008593.1 mouse_genomes_project 4 98081103 98081199 + Gm26154 miRNA miRNA MGP_WSBEiJ_T0067357.1 MGP_WSBEiJ_G0028137.1 mouse_genomes_project 4 135494959 135504643 - MGP_WSBEiJ_P0067357 Mtfr1l protein_coding protein_coding MGP_WSBEiJ_T0067358.1 MGP_WSBEiJ_G0028137.1 mouse_genomes_project 4 135494966 135504762 - MGP_WSBEiJ_P0067358 Mtfr1l protein_coding protein_coding MGP_WSBEiJ_T0067359.1 MGP_WSBEiJ_G0028137.1 mouse_genomes_project 4 135494973 135504673 - MGP_WSBEiJ_P0067359 Mtfr1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067360.1 MGP_WSBEiJ_G0028137.1 mouse_genomes_project 4 135497771 135504633 - Mtfr1l protein_coding retained_intron MGP_WSBEiJ_T0067361.1 MGP_WSBEiJ_G0028137.1 mouse_genomes_project 4 135498512 135504471 - MGP_WSBEiJ_P0067361 Mtfr1l protein_coding protein_coding MGP_WSBEiJ_T0067362.1 MGP_WSBEiJ_G0028137.1 mouse_genomes_project 4 135498547 135504762 - MGP_WSBEiJ_P0067362 Mtfr1l protein_coding protein_coding MGP_WSBEiJ_T0067363.1 MGP_WSBEiJ_G0028137.1 mouse_genomes_project 4 135498619 135504419 - Mtfr1l protein_coding retained_intron MGP_WSBEiJ_T0014263.1 MGP_WSBEiJ_G0012393.1 mouse_genomes_project 4 100741173 100741345 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068468.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156810403 157146391 - Prdm16 protein_coding processed_transcript MGP_WSBEiJ_T0068469.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156810403 157146391 - MGP_WSBEiJ_P0068469 Prdm16 protein_coding protein_coding MGP_WSBEiJ_T0068470.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156810403 157146391 - MGP_WSBEiJ_P0068470 Prdm16 protein_coding protein_coding MGP_WSBEiJ_T0068471.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156810403 157146391 - MGP_WSBEiJ_P0068471 Prdm16 protein_coding protein_coding MGP_WSBEiJ_T0068472.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156810403 157146391 - MGP_WSBEiJ_P0068472 Prdm16 protein_coding protein_coding MGP_WSBEiJ_T0068473.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156810403 157146391 - MGP_WSBEiJ_P0068473 Prdm16 protein_coding protein_coding MGP_WSBEiJ_T0068474.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156810403 157146391 - MGP_WSBEiJ_P0068474 Prdm16 protein_coding protein_coding MGP_WSBEiJ_T0068475.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156817611 156831948 - Prdm16 protein_coding processed_transcript MGP_WSBEiJ_T0068476.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156825374 156832018 - Prdm16 protein_coding processed_transcript MGP_WSBEiJ_T0068478.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156843231 156845550 - Prdm16 protein_coding processed_transcript MGP_WSBEiJ_T0068479.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156852367 157146398 - MGP_WSBEiJ_P0068479 Prdm16 protein_coding protein_coding MGP_WSBEiJ_T0068480.1 MGP_WSBEiJ_G0028391.1 mouse_genomes_project 4 156978247 157032966 - Prdm16 protein_coding processed_transcript MGP_WSBEiJ_T0066722.1 MGP_WSBEiJ_G0028009.1 mouse_genomes_project 4 128498425 128542719 - MGP_WSBEiJ_P0066722 CK137956 protein_coding protein_coding MGP_WSBEiJ_T0007813.1 MGP_WSBEiJ_G0006391.1 mouse_genomes_project 4 119029653 119030479 - Gm12862 lincRNA lincRNA MGP_WSBEiJ_T0067264.1 MGP_WSBEiJ_G0028117.1 mouse_genomes_project 4 134991686 134996855 + MGP_WSBEiJ_P0067264 Zfp683 protein_coding protein_coding MGP_WSBEiJ_T0065641.1 MGP_WSBEiJ_G0027760.1 mouse_genomes_project 4 107829258 107851079 - MGP_WSBEiJ_P0065641 Podn protein_coding protein_coding MGP_WSBEiJ_T0065642.1 MGP_WSBEiJ_G0027760.1 mouse_genomes_project 4 107829260 107838805 - MGP_WSBEiJ_P0065642 Podn protein_coding protein_coding MGP_WSBEiJ_T0065643.1 MGP_WSBEiJ_G0027760.1 mouse_genomes_project 4 107829264 107917633 - MGP_WSBEiJ_P0065643 Podn protein_coding protein_coding MGP_WSBEiJ_T0065644.1 MGP_WSBEiJ_G0027760.1 mouse_genomes_project 4 107829318 107850942 - MGP_WSBEiJ_P0065644 Podn protein_coding protein_coding MGP_WSBEiJ_T0065645.1 MGP_WSBEiJ_G0027760.1 mouse_genomes_project 4 107829321 107850943 - Podn protein_coding processed_transcript MGP_WSBEiJ_T0065646.1 MGP_WSBEiJ_G0027760.1 mouse_genomes_project 4 107832194 107836016 - MGP_WSBEiJ_P0065646 Podn protein_coding protein_coding MGP_WSBEiJ_T0065647.1 MGP_WSBEiJ_G0027760.1 mouse_genomes_project 4 107846011 107849975 - Podn protein_coding processed_transcript MGP_WSBEiJ_T0065648.1 MGP_WSBEiJ_G0027760.1 mouse_genomes_project 4 107846183 107851326 - Podn protein_coding processed_transcript MGP_WSBEiJ_T0067562.1 MGP_WSBEiJ_G0028188.1 mouse_genomes_project 4 138585238 138595782 - MGP_WSBEiJ_P0067562 protein_coding protein_coding MGP_WSBEiJ_T0067563.1 MGP_WSBEiJ_G0028188.1 mouse_genomes_project 4 138585247 138587032 - protein_coding processed_transcript MGP_WSBEiJ_T0007808.1 MGP_WSBEiJ_G0006386.1 mouse_genomes_project 4 114350849 114357632 + Gm12829 lincRNA lincRNA MGP_WSBEiJ_T0014364.1 MGP_WSBEiJ_G0012494.1 mouse_genomes_project 4 135461385 135462138 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067689.1 MGP_WSBEiJ_G0028215.1 mouse_genomes_project 4 140344707 140345956 + MGP_WSBEiJ_P0067689 Rnf186 protein_coding protein_coding MGP_WSBEiJ_T0066730.1 MGP_WSBEiJ_G0028012.1 mouse_genomes_project 4 129182137 129188561 - Zscan20 protein_coding processed_transcript MGP_WSBEiJ_T0066731.1 MGP_WSBEiJ_G0028012.1 mouse_genomes_project 4 129182145 129209190 - MGP_WSBEiJ_P0066731 Zscan20 protein_coding protein_coding MGP_WSBEiJ_T0066732.1 MGP_WSBEiJ_G0028012.1 mouse_genomes_project 4 129183973 129209134 - MGP_WSBEiJ_P0066732 Zscan20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066733.1 MGP_WSBEiJ_G0028012.1 mouse_genomes_project 4 129200545 129209126 - Zscan20 protein_coding retained_intron MGP_WSBEiJ_T0066734.1 MGP_WSBEiJ_G0028012.1 mouse_genomes_project 4 129203549 129209087 - MGP_WSBEiJ_P0066734 Zscan20 protein_coding protein_coding MGP_WSBEiJ_T0066735.1 MGP_WSBEiJ_G0028012.1 mouse_genomes_project 4 129203583 129209073 - MGP_WSBEiJ_P0066735 Zscan20 protein_coding protein_coding MGP_WSBEiJ_T0014259.1 MGP_WSBEiJ_G0012389.1 mouse_genomes_project 4 99120916 99121622 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014223.1 MGP_WSBEiJ_G0012353.1 mouse_genomes_project 4 86808375 86810345 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067062.1 MGP_WSBEiJ_G0028073.1 mouse_genomes_project 4 132945999 132957781 - protein_coding retained_intron MGP_WSBEiJ_T0007907.1 MGP_WSBEiJ_G0006464.1 mouse_genomes_project 4 158359403 158365604 + Gm26840 lincRNA lincRNA MGP_WSBEiJ_T0014169.1 MGP_WSBEiJ_G0012299.1 mouse_genomes_project 4 65341137 65341612 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064039.1 MGP_WSBEiJ_G0027396.1 mouse_genomes_project 4 39171901 39174082 - MGP_WSBEiJ_P0064039 Enho protein_coding protein_coding MGP_WSBEiJ_T0014075.1 MGP_WSBEiJ_G0012205.1 mouse_genomes_project 4 27822602 27823165 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014394.1 MGP_WSBEiJ_G0012524.1 mouse_genomes_project 4 150040019 150040780 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014347.1 MGP_WSBEiJ_G0012477.1 mouse_genomes_project 4 127084166 127084467 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099553.1 MGP_WSBEiJ_G0038216.1 mouse_genomes_project 4 117064333 117064410 - Snord55 snoRNA snoRNA MGP_WSBEiJ_T0067764.1 MGP_WSBEiJ_G0028234.1 mouse_genomes_project 4 142225722 142249342 + MGP_WSBEiJ_P0067764 Rcc2 protein_coding protein_coding MGP_WSBEiJ_T0067765.1 MGP_WSBEiJ_G0028234.1 mouse_genomes_project 4 142226654 142249342 + MGP_WSBEiJ_P0067765 Rcc2 protein_coding protein_coding MGP_WSBEiJ_T0067766.1 MGP_WSBEiJ_G0028234.1 mouse_genomes_project 4 142226654 142236691 + MGP_WSBEiJ_P0067766 Rcc2 protein_coding protein_coding MGP_WSBEiJ_T0067767.1 MGP_WSBEiJ_G0028234.1 mouse_genomes_project 4 142240616 142243243 + Rcc2 protein_coding processed_transcript MGP_WSBEiJ_T0067768.1 MGP_WSBEiJ_G0028234.1 mouse_genomes_project 4 142240643 142243151 + Rcc2 protein_coding processed_transcript MGP_WSBEiJ_T0066655.1 MGP_WSBEiJ_G0027992.1 mouse_genomes_project 4 127055583 127095884 + MGP_WSBEiJ_P0066655 Clspn protein_coding protein_coding MGP_WSBEiJ_T0066656.1 MGP_WSBEiJ_G0027992.1 mouse_genomes_project 4 127055643 127059805 + MGP_WSBEiJ_P0066656 Clspn protein_coding protein_coding MGP_WSBEiJ_T0066657.1 MGP_WSBEiJ_G0027992.1 mouse_genomes_project 4 127055653 127063325 + Clspn protein_coding processed_transcript MGP_WSBEiJ_T0066658.1 MGP_WSBEiJ_G0027992.1 mouse_genomes_project 4 127059796 127065761 + MGP_WSBEiJ_P0066658 Clspn protein_coding protein_coding MGP_WSBEiJ_T0066659.1 MGP_WSBEiJ_G0027992.1 mouse_genomes_project 4 127066036 127077217 + MGP_WSBEiJ_P0066659 Clspn protein_coding protein_coding MGP_WSBEiJ_T0066660.1 MGP_WSBEiJ_G0027992.1 mouse_genomes_project 4 127071894 127074717 + Clspn protein_coding processed_transcript MGP_WSBEiJ_T0066661.1 MGP_WSBEiJ_G0027992.1 mouse_genomes_project 4 127080785 127091249 + Clspn protein_coding processed_transcript MGP_WSBEiJ_T0068621.1 MGP_WSBEiJ_G0028417.1 mouse_genomes_project 4 158287104 158317233 + MGP_WSBEiJ_P0068621 Ssu72 protein_coding protein_coding MGP_WSBEiJ_T0068622.1 MGP_WSBEiJ_G0028417.1 mouse_genomes_project 4 158287428 158298953 + Ssu72 protein_coding retained_intron MGP_WSBEiJ_T0068623.1 MGP_WSBEiJ_G0028417.1 mouse_genomes_project 4 158287439 158315550 + MGP_WSBEiJ_P0068623 Ssu72 protein_coding protein_coding MGP_WSBEiJ_T0066920.1 MGP_WSBEiJ_G0028047.1 mouse_genomes_project 4 130407673 130450494 - MGP_WSBEiJ_P0066920 Khdrbs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066921.1 MGP_WSBEiJ_G0028047.1 mouse_genomes_project 4 130408332 130418371 - Khdrbs1 protein_coding retained_intron MGP_WSBEiJ_T0066922.1 MGP_WSBEiJ_G0028047.1 mouse_genomes_project 4 130421079 130450491 - MGP_WSBEiJ_P0066922 Khdrbs1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0066923.1 MGP_WSBEiJ_G0028047.1 mouse_genomes_project 4 130434260 130450500 - Khdrbs1 protein_coding retained_intron MGP_WSBEiJ_T0065220.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95344904 95404154 + MGP_WSBEiJ_P0065220 Hook1 protein_coding protein_coding MGP_WSBEiJ_T0065221.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95345027 95394222 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0065222.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95345033 95376898 + MGP_WSBEiJ_P0065222 Hook1 protein_coding protein_coding MGP_WSBEiJ_T0065223.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95352091 95401081 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0065224.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95379649 95387643 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0065225.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95380823 95388036 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0065226.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95382477 95401223 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0065227.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95391407 95398365 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0065228.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95394925 95396415 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0065229.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95398749 95400970 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0065230.1 MGP_WSBEiJ_G0027670.1 mouse_genomes_project 4 95399979 95404132 + Hook1 protein_coding processed_transcript MGP_WSBEiJ_T0066789.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129788843 129832113 - MGP_WSBEiJ_P0066789 S100pbp protein_coding protein_coding MGP_WSBEiJ_T0066790.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129788843 129832076 - MGP_WSBEiJ_P0066790 S100pbp protein_coding protein_coding MGP_WSBEiJ_T0066791.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129788843 129832261 - MGP_WSBEiJ_P0066791 S100pbp protein_coding protein_coding MGP_WSBEiJ_T0066792.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129790210 129825071 - MGP_WSBEiJ_P0066792 S100pbp protein_coding protein_coding MGP_WSBEiJ_T0066793.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129791417 129832111 - S100pbp protein_coding processed_transcript MGP_WSBEiJ_T0066794.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129791699 129832111 - S100pbp protein_coding retained_intron MGP_WSBEiJ_T0066795.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129791699 129822959 - S100pbp protein_coding retained_intron MGP_WSBEiJ_T0066796.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129791905 129832046 - MGP_WSBEiJ_P0066796 S100pbp protein_coding protein_coding MGP_WSBEiJ_T0066797.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129791905 129832143 - MGP_WSBEiJ_P0066797 S100pbp protein_coding protein_coding MGP_WSBEiJ_T0066798.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129805256 129832151 - S100pbp protein_coding processed_transcript MGP_WSBEiJ_T0066799.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129810460 129820252 - S100pbp protein_coding processed_transcript MGP_WSBEiJ_T0066800.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129819111 129832160 - MGP_WSBEiJ_P0066800 S100pbp protein_coding protein_coding MGP_WSBEiJ_T0066801.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129824282 129832204 - S100pbp protein_coding processed_transcript MGP_WSBEiJ_T0066802.1 MGP_WSBEiJ_G0028024.1 mouse_genomes_project 4 129824340 129832032 - S100pbp protein_coding processed_transcript MGP_WSBEiJ_T0017483.1 MGP_WSBEiJ_G0014987.1 mouse_genomes_project 4 109443513 109534933 + Gm12811 processed_transcript processed_transcript MGP_WSBEiJ_T0065075.1 MGP_WSBEiJ_G0027624.1 mouse_genomes_project 4 85688220 85689837 + MGP_WSBEiJ_P0065075 Rraga protein_coding protein_coding MGP_WSBEiJ_T0099493.1 MGP_WSBEiJ_G0038156.1 mouse_genomes_project 4 469823 469891 - Gm24016 snoRNA snoRNA MGP_WSBEiJ_T0014217.1 MGP_WSBEiJ_G0012347.1 mouse_genomes_project 4 83741756 83742804 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065795.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110103872 110188242 - MGP_WSBEiJ_P0065795 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065796.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110103887 110250843 - MGP_WSBEiJ_P0065796 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065797.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110103887 110187605 - MGP_WSBEiJ_P0065797 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065798.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110103887 110188242 - MGP_WSBEiJ_P0065798 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065799.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110103887 110187605 - MGP_WSBEiJ_P0065799 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065800.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110103887 110194031 - MGP_WSBEiJ_P0065800 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065801.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110103887 110190979 - MGP_WSBEiJ_P0065801 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065802.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110106512 110123234 - Elavl4 protein_coding processed_transcript MGP_WSBEiJ_T0065803.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110113334 110187334 - MGP_WSBEiJ_P0065803 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065804.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110125668 110174865 - Elavl4 protein_coding processed_transcript MGP_WSBEiJ_T0065805.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110126697 110188242 - MGP_WSBEiJ_P0065805 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0065806.1 MGP_WSBEiJ_G0027789.1 mouse_genomes_project 4 110152159 110191615 - MGP_WSBEiJ_P0065806 Elavl4 protein_coding protein_coding MGP_WSBEiJ_T0064897.1 MGP_WSBEiJ_G0027594.1 mouse_genomes_project 4 67463165 67665769 - MGP_WSBEiJ_P0064897 Brinp1 protein_coding protein_coding MGP_WSBEiJ_T0064898.1 MGP_WSBEiJ_G0027594.1 mouse_genomes_project 4 67498686 67545697 - Brinp1 protein_coding processed_transcript MGP_WSBEiJ_T0064899.1 MGP_WSBEiJ_G0027594.1 mouse_genomes_project 4 67531394 67534206 - Brinp1 protein_coding processed_transcript MGP_WSBEiJ_T0067131.1 MGP_WSBEiJ_G0028086.1 mouse_genomes_project 4 133518725 133528199 - MGP_WSBEiJ_P0067131 Xkr8 protein_coding protein_coding MGP_WSBEiJ_T0067132.1 MGP_WSBEiJ_G0028086.1 mouse_genomes_project 4 133522335 133528181 - Xkr8 protein_coding processed_transcript MGP_WSBEiJ_T0067133.1 MGP_WSBEiJ_G0028086.1 mouse_genomes_project 4 133526556 133528136 - Xkr8 protein_coding processed_transcript MGP_WSBEiJ_T0100819.1 MGP_WSBEiJ_G0039277.1 mouse_genomes_project 4 90377175 90377847 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0064099.1 MGP_WSBEiJ_G0027413.1 mouse_genomes_project 4 40611311 40613038 + 1700022I11Rik protein_coding processed_transcript MGP_WSBEiJ_T0064100.1 MGP_WSBEiJ_G0027413.1 mouse_genomes_project 4 40611338 40613004 + MGP_WSBEiJ_P0064100 1700022I11Rik protein_coding protein_coding MGP_WSBEiJ_T0064101.1 MGP_WSBEiJ_G0027413.1 mouse_genomes_project 4 40611639 40613194 + MGP_WSBEiJ_P0064101 1700022I11Rik protein_coding protein_coding MGP_WSBEiJ_T0064102.1 MGP_WSBEiJ_G0027413.1 mouse_genomes_project 4 40611651 40627031 + MGP_WSBEiJ_P0064102 1700022I11Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064103.1 MGP_WSBEiJ_G0027413.1 mouse_genomes_project 4 40611651 40616032 + MGP_WSBEiJ_P0064103 1700022I11Rik protein_coding protein_coding MGP_WSBEiJ_T0007866.1 MGP_WSBEiJ_G0006427.1 mouse_genomes_project 4 136136961 136139188 - Gm16225 lincRNA lincRNA MGP_WSBEiJ_T0014111.1 MGP_WSBEiJ_G0012241.1 mouse_genomes_project 4 38767128 38767356 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007733.1 MGP_WSBEiJ_G0006325.1 mouse_genomes_project 4 53747521 53786664 + Gm12511 lincRNA lincRNA MGP_WSBEiJ_T0068158.1 MGP_WSBEiJ_G0028336.1 mouse_genomes_project 4 151611704 151614727 + MGP_WSBEiJ_P0068158 Lzic protein_coding protein_coding MGP_WSBEiJ_T0068159.1 MGP_WSBEiJ_G0028336.1 mouse_genomes_project 4 151611706 151614755 + MGP_WSBEiJ_P0068159 Lzic protein_coding protein_coding MGP_WSBEiJ_T0068160.1 MGP_WSBEiJ_G0028336.1 mouse_genomes_project 4 151611715 151612204 + Lzic protein_coding processed_transcript MGP_WSBEiJ_T0068161.1 MGP_WSBEiJ_G0028336.1 mouse_genomes_project 4 151611769 151623042 + MGP_WSBEiJ_P0068161 Lzic protein_coding protein_coding MGP_WSBEiJ_T0068162.1 MGP_WSBEiJ_G0028336.1 mouse_genomes_project 4 151611808 151612465 + Lzic protein_coding processed_transcript MGP_WSBEiJ_T0068296.1 MGP_WSBEiJ_G0028363.1 mouse_genomes_project 4 154331796 154339676 - MGP_WSBEiJ_P0068296 Zbtb48 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068297.1 MGP_WSBEiJ_G0028363.1 mouse_genomes_project 4 154331796 154339676 - MGP_WSBEiJ_P0068297 Zbtb48 protein_coding protein_coding MGP_WSBEiJ_T0068298.1 MGP_WSBEiJ_G0028363.1 mouse_genomes_project 4 154331798 154339686 - Zbtb48 protein_coding retained_intron MGP_WSBEiJ_T0068299.1 MGP_WSBEiJ_G0028363.1 mouse_genomes_project 4 154331822 154332639 - Zbtb48 protein_coding processed_transcript MGP_WSBEiJ_T0068300.1 MGP_WSBEiJ_G0028363.1 mouse_genomes_project 4 154333131 154334129 - Zbtb48 protein_coding processed_transcript MGP_WSBEiJ_T0068301.1 MGP_WSBEiJ_G0028363.1 mouse_genomes_project 4 154333614 154338459 - MGP_WSBEiJ_P0068301 Zbtb48 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068302.1 MGP_WSBEiJ_G0028363.1 mouse_genomes_project 4 154334508 154338062 - Zbtb48 protein_coding retained_intron MGP_WSBEiJ_T0068303.1 MGP_WSBEiJ_G0028363.1 mouse_genomes_project 4 154338492 154339652 - MGP_WSBEiJ_P0068303 Zbtb48 protein_coding protein_coding MGP_WSBEiJ_T0010429.1 MGP_WSBEiJ_G0008586.1 mouse_genomes_project 4 81061978 81062088 - Gm22402 miRNA miRNA MGP_WSBEiJ_T0065935.1 MGP_WSBEiJ_G0027822.1 mouse_genomes_project 4 115736208 115749441 - MGP_WSBEiJ_P0065935 Dmbx1 protein_coding protein_coding MGP_WSBEiJ_T0065936.1 MGP_WSBEiJ_G0027822.1 mouse_genomes_project 4 115736208 115763700 - MGP_WSBEiJ_P0065936 Dmbx1 protein_coding protein_coding MGP_WSBEiJ_T0065937.1 MGP_WSBEiJ_G0027822.1 mouse_genomes_project 4 115736209 115763700 - MGP_WSBEiJ_P0065937 Dmbx1 protein_coding protein_coding MGP_WSBEiJ_T0014031.1 MGP_WSBEiJ_G0012161.1 mouse_genomes_project 4 14089539 14089800 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067830.1 MGP_WSBEiJ_G0028249.1 mouse_genomes_project 4 142795049 142801950 + MGP_WSBEiJ_P0067830 Arhgef19 protein_coding protein_coding MGP_WSBEiJ_T0067831.1 MGP_WSBEiJ_G0028249.1 mouse_genomes_project 4 142795200 142803031 + Arhgef19 protein_coding retained_intron MGP_WSBEiJ_T0067832.1 MGP_WSBEiJ_G0028249.1 mouse_genomes_project 4 142798414 142801894 + MGP_WSBEiJ_P0067832 Arhgef19 protein_coding protein_coding MGP_WSBEiJ_T0067833.1 MGP_WSBEiJ_G0028249.1 mouse_genomes_project 4 142798428 142815498 + MGP_WSBEiJ_P0067833 Arhgef19 protein_coding protein_coding MGP_WSBEiJ_T0067834.1 MGP_WSBEiJ_G0028249.1 mouse_genomes_project 4 142798452 142802542 + MGP_WSBEiJ_P0067834 Arhgef19 protein_coding protein_coding MGP_WSBEiJ_T0067835.1 MGP_WSBEiJ_G0028249.1 mouse_genomes_project 4 142800988 142802985 + MGP_WSBEiJ_P0067835 Arhgef19 protein_coding protein_coding MGP_WSBEiJ_T0067836.1 MGP_WSBEiJ_G0028249.1 mouse_genomes_project 4 142801933 142803651 + MGP_WSBEiJ_P0067836 Arhgef19 protein_coding protein_coding MGP_WSBEiJ_T0067837.1 MGP_WSBEiJ_G0028249.1 mouse_genomes_project 4 142802466 142803518 + Arhgef19 protein_coding retained_intron MGP_WSBEiJ_T0017446.1 MGP_WSBEiJ_G0014960.1 mouse_genomes_project 4 30202949 30207962 - 4933421O10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0010401.1 MGP_WSBEiJ_G0008558.1 mouse_genomes_project 4 8659428 8659492 + Gm25002 miRNA miRNA MGP_WSBEiJ_T0007729.1 MGP_WSBEiJ_G0006322.1 mouse_genomes_project 4 52804456 52834568 + Gm12478 lincRNA lincRNA MGP_WSBEiJ_T0014330.1 MGP_WSBEiJ_G0012460.1 mouse_genomes_project 4 121549168 121549497 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014024.1 MGP_WSBEiJ_G0012154.1 mouse_genomes_project 4 12531379 12532217 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099544.1 MGP_WSBEiJ_G0038207.1 mouse_genomes_project 4 93450652 93450781 + Gm23836 snoRNA snoRNA MGP_WSBEiJ_T0066903.1 MGP_WSBEiJ_G0028044.1 mouse_genomes_project 4 130322810 130338721 - MGP_WSBEiJ_P0066903 Txlna protein_coding protein_coding MGP_WSBEiJ_T0066904.1 MGP_WSBEiJ_G0028044.1 mouse_genomes_project 4 130322815 130338298 - Txlna protein_coding retained_intron MGP_WSBEiJ_T0066905.1 MGP_WSBEiJ_G0028044.1 mouse_genomes_project 4 130322815 130338461 - MGP_WSBEiJ_P0066905 Txlna protein_coding protein_coding MGP_WSBEiJ_T0066906.1 MGP_WSBEiJ_G0028044.1 mouse_genomes_project 4 130328894 130338721 - MGP_WSBEiJ_P0066906 Txlna protein_coding protein_coding MGP_WSBEiJ_T0066907.1 MGP_WSBEiJ_G0028044.1 mouse_genomes_project 4 130331112 130338634 - MGP_WSBEiJ_P0066907 Txlna protein_coding protein_coding MGP_WSBEiJ_T0066908.1 MGP_WSBEiJ_G0028044.1 mouse_genomes_project 4 130331128 130338615 - MGP_WSBEiJ_P0066908 Txlna protein_coding protein_coding MGP_WSBEiJ_T0066909.1 MGP_WSBEiJ_G0028044.1 mouse_genomes_project 4 130337119 130338616 - MGP_WSBEiJ_P0066909 Txlna protein_coding protein_coding MGP_WSBEiJ_T0097392.1 MGP_WSBEiJ_G0036066.1 mouse_genomes_project 4 94513967 94519737 + Gm28096 sense_intronic sense_intronic MGP_WSBEiJ_T0067898.1 MGP_WSBEiJ_G0028266.1 mouse_genomes_project 4 143389312 143394217 + Casp9 protein_coding processed_transcript MGP_WSBEiJ_T0067899.1 MGP_WSBEiJ_G0028266.1 mouse_genomes_project 4 143389841 143399052 + MGP_WSBEiJ_P0067899 Casp9 protein_coding protein_coding MGP_WSBEiJ_T0067900.1 MGP_WSBEiJ_G0028266.1 mouse_genomes_project 4 143389975 143392705 + Casp9 protein_coding processed_transcript MGP_WSBEiJ_T0067901.1 MGP_WSBEiJ_G0028266.1 mouse_genomes_project 4 143389986 143409575 + MGP_WSBEiJ_P0067901 Casp9 protein_coding protein_coding MGP_WSBEiJ_T0067902.1 MGP_WSBEiJ_G0028266.1 mouse_genomes_project 4 143408357 143409573 + Casp9 protein_coding processed_transcript MGP_WSBEiJ_T0064731.1 MGP_WSBEiJ_G0027548.1 mouse_genomes_project 4 57383586 57421471 + MGP_WSBEiJ_P0064731 Gm20503 protein_coding protein_coding MGP_WSBEiJ_T0014074.1 MGP_WSBEiJ_G0012204.1 mouse_genomes_project 4 27329924 27330459 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066462.1 MGP_WSBEiJ_G0027942.1 mouse_genomes_project 4 123364966 123366529 + MGP_WSBEiJ_P0066462 Oxct2a protein_coding protein_coding MGP_WSBEiJ_T0004515.1 MGP_WSBEiJ_G0003916.1 mouse_genomes_project 4 151462544 151462989 + Ube4bos2 antisense antisense MGP_WSBEiJ_T0066664.1 MGP_WSBEiJ_G0027994.1 mouse_genomes_project 4 127186764 127221255 + MGP_WSBEiJ_P0066664 Psmb2 protein_coding protein_coding MGP_WSBEiJ_T0066665.1 MGP_WSBEiJ_G0027994.1 mouse_genomes_project 4 127186813 127196420 + Psmb2 protein_coding processed_transcript MGP_WSBEiJ_T0066666.1 MGP_WSBEiJ_G0027994.1 mouse_genomes_project 4 127186838 127219303 + Psmb2 protein_coding processed_transcript MGP_WSBEiJ_T0014007.1 MGP_WSBEiJ_G0012137.1 mouse_genomes_project 4 7218869 7219160 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013991.1 MGP_WSBEiJ_G0012121.1 mouse_genomes_project 4 626542 627042 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010437.1 MGP_WSBEiJ_G0008594.1 mouse_genomes_project 4 99166961 99167050 + Gm23366 miRNA miRNA MGP_WSBEiJ_T0065488.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106401400 106421066 - MGP_WSBEiJ_P0065488 Ttc4 protein_coding protein_coding MGP_WSBEiJ_T0065489.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106401404 106420808 - Ttc4 protein_coding processed_transcript MGP_WSBEiJ_T0065490.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106401577 106406720 - Ttc4 protein_coding processed_transcript MGP_WSBEiJ_T0065491.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106402208 106420988 - MGP_WSBEiJ_P0065491 Ttc4 protein_coding protein_coding MGP_WSBEiJ_T0065492.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106406816 106410872 - Ttc4 protein_coding processed_transcript MGP_WSBEiJ_T0065493.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106407319 106410220 - Ttc4 protein_coding processed_transcript MGP_WSBEiJ_T0065494.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106409651 106421013 - MGP_WSBEiJ_P0065494 Ttc4 protein_coding protein_coding MGP_WSBEiJ_T0065495.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106410926 106421023 - Ttc4 protein_coding processed_transcript MGP_WSBEiJ_T0065496.1 MGP_WSBEiJ_G0027737.1 mouse_genomes_project 4 106418411 106421011 - Ttc4 protein_coding processed_transcript MGP_WSBEiJ_T0014038.1 MGP_WSBEiJ_G0012168.1 mouse_genomes_project 4 16122607 16123455 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007752.1 MGP_WSBEiJ_G0006342.1 mouse_genomes_project 4 69821192 69874868 - Gm11228 lincRNA lincRNA MGP_WSBEiJ_T0004368.1 MGP_WSBEiJ_G0003805.1 mouse_genomes_project 4 41422606 41429235 + antisense antisense MGP_WSBEiJ_T0014386.1 MGP_WSBEiJ_G0012516.1 mouse_genomes_project 4 145385340 145388720 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099515.1 MGP_WSBEiJ_G0038178.1 mouse_genomes_project 4 44355793 44355924 + Gm22247 snoRNA snoRNA MGP_WSBEiJ_T0066885.1 MGP_WSBEiJ_G0028041.1 mouse_genomes_project 4 130305453 130311365 - MGP_WSBEiJ_P0066885 Dcdc2b protein_coding protein_coding MGP_WSBEiJ_T0066886.1 MGP_WSBEiJ_G0028041.1 mouse_genomes_project 4 130305651 130306371 - Dcdc2b protein_coding retained_intron MGP_WSBEiJ_T0066887.1 MGP_WSBEiJ_G0028041.1 mouse_genomes_project 4 130305870 130311362 - MGP_WSBEiJ_P0066887 Dcdc2b protein_coding protein_coding MGP_WSBEiJ_T0068028.1 MGP_WSBEiJ_G0028313.1 mouse_genomes_project 4 150148681 150161232 + Mad2l2 protein_coding processed_transcript MGP_WSBEiJ_T0068029.1 MGP_WSBEiJ_G0028313.1 mouse_genomes_project 4 150160622 150166961 + MGP_WSBEiJ_P0068029 Mad2l2 protein_coding protein_coding MGP_WSBEiJ_T0068030.1 MGP_WSBEiJ_G0028313.1 mouse_genomes_project 4 150161164 150166960 + MGP_WSBEiJ_P0068030 Mad2l2 protein_coding protein_coding MGP_WSBEiJ_T0068031.1 MGP_WSBEiJ_G0028313.1 mouse_genomes_project 4 150161202 150165295 + Mad2l2 protein_coding retained_intron MGP_WSBEiJ_T0068032.1 MGP_WSBEiJ_G0028313.1 mouse_genomes_project 4 150161235 150167524 + MGP_WSBEiJ_P0068032 Mad2l2 protein_coding protein_coding MGP_WSBEiJ_T0068033.1 MGP_WSBEiJ_G0028313.1 mouse_genomes_project 4 150166629 150167291 + Mad2l2 protein_coding retained_intron MGP_WSBEiJ_T0066032.1 MGP_WSBEiJ_G0027840.1 mouse_genomes_project 4 116559502 116561799 + Prdx1 protein_coding retained_intron MGP_WSBEiJ_T0066033.1 MGP_WSBEiJ_G0027840.1 mouse_genomes_project 4 116559502 116569215 + MGP_WSBEiJ_P0066033 Prdx1 protein_coding protein_coding MGP_WSBEiJ_T0066034.1 MGP_WSBEiJ_G0027840.1 mouse_genomes_project 4 116559508 116575371 + MGP_WSBEiJ_P0066034 Prdx1 protein_coding protein_coding MGP_WSBEiJ_T0066035.1 MGP_WSBEiJ_G0027840.1 mouse_genomes_project 4 116559764 116568365 + MGP_WSBEiJ_P0066035 Prdx1 protein_coding protein_coding MGP_WSBEiJ_T0001382.1 MGP_WSBEiJ_G0001311.1 mouse_genomes_project 4 119340368 119340802 - TEC TEC MGP_WSBEiJ_T0004430.1 MGP_WSBEiJ_G0003849.1 mouse_genomes_project 4 114820180 114825470 + Cyp4x1os antisense antisense MGP_WSBEiJ_T0098244.1 MGP_WSBEiJ_G0036907.1 mouse_genomes_project 4 37335912 37335994 + Gm22850 snRNA snRNA MGP_WSBEiJ_T0014103.1 MGP_WSBEiJ_G0012233.1 mouse_genomes_project 4 37298147 37299066 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096826.1 MGP_WSBEiJ_G0035507.1 mouse_genomes_project 4 130582572 130584218 + pseudogene pseudogene MGP_WSBEiJ_T0014285.1 MGP_WSBEiJ_G0012415.1 mouse_genomes_project 4 108152873 108153181 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010409.1 MGP_WSBEiJ_G0008566.1 mouse_genomes_project 4 33988202 33988283 - Mir876 miRNA miRNA MGP_WSBEiJ_T0063609.1 MGP_WSBEiJ_G0027285.1 mouse_genomes_project 4 8177819 8243965 + MGP_WSBEiJ_P0063609 1110037F02Rik protein_coding protein_coding MGP_WSBEiJ_T0063610.1 MGP_WSBEiJ_G0027285.1 mouse_genomes_project 4 8177819 8220418 + MGP_WSBEiJ_P0063610 1110037F02Rik protein_coding protein_coding MGP_WSBEiJ_T0063611.1 MGP_WSBEiJ_G0027285.1 mouse_genomes_project 4 8177904 8243965 + MGP_WSBEiJ_P0063611 1110037F02Rik protein_coding protein_coding MGP_WSBEiJ_T0099533.1 MGP_WSBEiJ_G0038196.1 mouse_genomes_project 4 71635118 71635258 - Gm25653 snoRNA snoRNA MGP_WSBEiJ_T0065714.1 MGP_WSBEiJ_G0027774.1 mouse_genomes_project 4 108669987 108690110 - MGP_WSBEiJ_P0065714 Btf3l4 protein_coding protein_coding MGP_WSBEiJ_T0065715.1 MGP_WSBEiJ_G0027774.1 mouse_genomes_project 4 108672410 108690060 - MGP_WSBEiJ_P0065715 Btf3l4 protein_coding protein_coding MGP_WSBEiJ_T0065716.1 MGP_WSBEiJ_G0027774.1 mouse_genomes_project 4 108672483 108690050 - MGP_WSBEiJ_P0065716 Btf3l4 protein_coding protein_coding MGP_WSBEiJ_T0065717.1 MGP_WSBEiJ_G0027774.1 mouse_genomes_project 4 108672524 108688426 - MGP_WSBEiJ_P0065717 Btf3l4 protein_coding protein_coding MGP_WSBEiJ_T0065718.1 MGP_WSBEiJ_G0027774.1 mouse_genomes_project 4 108674468 108682696 - Btf3l4 protein_coding processed_transcript MGP_WSBEiJ_T0065719.1 MGP_WSBEiJ_G0027774.1 mouse_genomes_project 4 108682203 108687047 - Btf3l4 protein_coding processed_transcript MGP_WSBEiJ_T0014349.1 MGP_WSBEiJ_G0012479.1 mouse_genomes_project 4 127509658 127509823 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063673.1 MGP_WSBEiJ_G0027304.1 mouse_genomes_project 4 12704165 12733840 - MGP_WSBEiJ_P0063673 Decr1 protein_coding protein_coding MGP_WSBEiJ_T0063674.1 MGP_WSBEiJ_G0027304.1 mouse_genomes_project 4 12721309 12733608 - Decr1 protein_coding processed_transcript MGP_WSBEiJ_T0063675.1 MGP_WSBEiJ_G0027304.1 mouse_genomes_project 4 12732023 12732822 - Decr1 protein_coding processed_transcript MGP_WSBEiJ_T0068481.1 MGP_WSBEiJ_G0028393.1 mouse_genomes_project 4 157182577 157184012 - MGP_WSBEiJ_P0068481 Actrt2 protein_coding protein_coding MGP_WSBEiJ_T0014180.1 MGP_WSBEiJ_G0012310.1 mouse_genomes_project 4 70407583 70409285 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064213.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41145640 41146733 - MGP_WSBEiJ_P0064213 Arhgef39 protein_coding protein_coding MGP_WSBEiJ_T0064214.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41145640 41149198 - MGP_WSBEiJ_P0064214 Arhgef39 protein_coding protein_coding MGP_WSBEiJ_T0064215.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41145644 41149122 - Arhgef39 protein_coding processed_transcript MGP_WSBEiJ_T0064216.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41145646 41146712 - Arhgef39 protein_coding processed_transcript MGP_WSBEiJ_T0064217.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41146022 41149164 - Arhgef39 protein_coding processed_transcript MGP_WSBEiJ_T0064218.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41146319 41149111 - MGP_WSBEiJ_P0064218 Arhgef39 protein_coding protein_coding MGP_WSBEiJ_T0064219.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41146718 41148618 - Arhgef39 protein_coding processed_transcript MGP_WSBEiJ_T0064220.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41146759 41148578 - Arhgef39 protein_coding processed_transcript MGP_WSBEiJ_T0064221.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41147230 41149114 - Arhgef39 protein_coding processed_transcript MGP_WSBEiJ_T0064222.1 MGP_WSBEiJ_G0027427.1 mouse_genomes_project 4 41148649 41149164 - Arhgef39 protein_coding processed_transcript MGP_WSBEiJ_T0098243.1 MGP_WSBEiJ_G0036906.1 mouse_genomes_project 4 36723717 36723881 - Gm25581 snRNA snRNA MGP_WSBEiJ_T0017440.1 MGP_WSBEiJ_G0014956.1 mouse_genomes_project 4 12954978 13063367 + A530072M11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0014322.1 MGP_WSBEiJ_G0012452.1 mouse_genomes_project 4 119583162 119583539 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098306.1 MGP_WSBEiJ_G0036969.1 mouse_genomes_project 4 137232587 137232690 + Gm26001 snRNA snRNA MGP_WSBEiJ_T0010457.1 MGP_WSBEiJ_G0008614.1 mouse_genomes_project 4 132712148 132712220 - Gm27445 miRNA miRNA MGP_WSBEiJ_T0067330.1 MGP_WSBEiJ_G0028130.1 mouse_genomes_project 4 135265266 135281717 + MGP_WSBEiJ_P0067330 Trim63 protein_coding protein_coding MGP_WSBEiJ_T0067331.1 MGP_WSBEiJ_G0028130.1 mouse_genomes_project 4 135265268 135281695 + MGP_WSBEiJ_P0067331 Trim63 protein_coding protein_coding MGP_WSBEiJ_T0067332.1 MGP_WSBEiJ_G0028130.1 mouse_genomes_project 4 135265358 135267524 + Trim63 protein_coding retained_intron MGP_WSBEiJ_T0067333.1 MGP_WSBEiJ_G0028130.1 mouse_genomes_project 4 135270134 135281714 + Trim63 protein_coding processed_transcript MGP_WSBEiJ_T0004536.1 MGP_WSBEiJ_G0003933.1 mouse_genomes_project 4 157899643 157900426 + Gm27200 antisense antisense MGP_WSBEiJ_T0014016.1 MGP_WSBEiJ_G0012146.1 mouse_genomes_project 4 10930551 10931352 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098305.1 MGP_WSBEiJ_G0036968.1 mouse_genomes_project 4 136628219 136628320 + Gm23106 snRNA snRNA MGP_WSBEiJ_T0014252.1 MGP_WSBEiJ_G0012382.1 mouse_genomes_project 4 97677908 97678397 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014339.1 MGP_WSBEiJ_G0012469.1 mouse_genomes_project 4 124203730 124204278 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014312.1 MGP_WSBEiJ_G0012442.1 mouse_genomes_project 4 117707716 117708039 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017482.1 MGP_WSBEiJ_G0014986.1 mouse_genomes_project 4 108448000 108475017 - Gm12743 processed_transcript processed_transcript MGP_WSBEiJ_T0010424.1 MGP_WSBEiJ_G0008581.1 mouse_genomes_project 4 56770947 56771034 - Mir3095 miRNA miRNA MGP_WSBEiJ_T0068188.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152055798 152117753 - MGP_WSBEiJ_P0068188 Spsb1 protein_coding protein_coding MGP_WSBEiJ_T0068189.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152057483 152069221 - MGP_WSBEiJ_P0068189 Spsb1 protein_coding protein_coding MGP_WSBEiJ_T0068190.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152057730 152066694 - MGP_WSBEiJ_P0068190 Spsb1 protein_coding protein_coding MGP_WSBEiJ_T0068191.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152065911 152116515 - MGP_WSBEiJ_P0068191 Spsb1 protein_coding protein_coding MGP_WSBEiJ_T0068192.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152066395 152081919 - MGP_WSBEiJ_P0068192 Spsb1 protein_coding protein_coding MGP_WSBEiJ_T0068193.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152066399 152094258 - MGP_WSBEiJ_P0068193 Spsb1 protein_coding protein_coding MGP_WSBEiJ_T0068194.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152066404 152105380 - MGP_WSBEiJ_P0068194 Spsb1 protein_coding protein_coding MGP_WSBEiJ_T0068195.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152066453 152108890 - MGP_WSBEiJ_P0068195 Spsb1 protein_coding protein_coding MGP_WSBEiJ_T0068196.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152066546 152117753 - Spsb1 protein_coding processed_transcript MGP_WSBEiJ_T0068197.1 MGP_WSBEiJ_G0028342.1 mouse_genomes_project 4 152068969 152117741 - Spsb1 protein_coding processed_transcript MGP_WSBEiJ_T0017491.1 MGP_WSBEiJ_G0014991.1 mouse_genomes_project 4 117130815 117131264 - 1700012C08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0065890.1 MGP_WSBEiJ_G0027808.1 mouse_genomes_project 4 114826191 114847565 - MGP_WSBEiJ_P0065890 Cyp4a29 protein_coding protein_coding MGP_WSBEiJ_T0063974.1 MGP_WSBEiJ_G0027379.1 mouse_genomes_project 4 38387611 38400207 + MGP_WSBEiJ_P0063974 Spink4 protein_coding protein_coding MGP_WSBEiJ_T0063975.1 MGP_WSBEiJ_G0027379.1 mouse_genomes_project 4 38387613 38392603 + Spink4 protein_coding processed_transcript MGP_WSBEiJ_T0099502.1 MGP_WSBEiJ_G0038165.1 mouse_genomes_project 4 19251482 19251615 + Gm24607 snoRNA snoRNA MGP_WSBEiJ_T0011376.1 MGP_WSBEiJ_G0009533.1 mouse_genomes_project 4 101100918 101101192 + Gm22533 misc_RNA misc_RNA MGP_WSBEiJ_T0067950.1 MGP_WSBEiJ_G0028282.1 mouse_genomes_project 4 145649961 145654155 + protein_coding retained_intron MGP_WSBEiJ_T0010402.1 MGP_WSBEiJ_G0008559.1 mouse_genomes_project 4 9999383 9999449 - Gm26250 miRNA miRNA MGP_WSBEiJ_T0065438.1 MGP_WSBEiJ_G0027718.1 mouse_genomes_project 4 102778298 102823677 - MGP_WSBEiJ_P0065438 Slc35d1 protein_coding protein_coding MGP_WSBEiJ_T0065439.1 MGP_WSBEiJ_G0027718.1 mouse_genomes_project 4 102778305 102823316 - MGP_WSBEiJ_P0065439 Slc35d1 protein_coding protein_coding MGP_WSBEiJ_T0065440.1 MGP_WSBEiJ_G0027718.1 mouse_genomes_project 4 102808814 102823316 - MGP_WSBEiJ_P0065440 Slc35d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065441.1 MGP_WSBEiJ_G0027718.1 mouse_genomes_project 4 102818846 102823312 - Slc35d1 protein_coding retained_intron MGP_WSBEiJ_T0065442.1 MGP_WSBEiJ_G0027718.1 mouse_genomes_project 4 102819067 102823185 - Slc35d1 protein_coding retained_intron MGP_WSBEiJ_T0067741.1 MGP_WSBEiJ_G0028226.1 mouse_genomes_project 4 140987582 141039894 + MGP_WSBEiJ_P0067741 Iffo2 protein_coding protein_coding MGP_WSBEiJ_T0007701.1 MGP_WSBEiJ_G0006298.1 mouse_genomes_project 4 26166551 26167609 + Gm11916 lincRNA lincRNA MGP_WSBEiJ_T0065969.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115963323 115979671 + Pomgnt1 protein_coding processed_transcript MGP_WSBEiJ_T0065971.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115978058 116002153 + MGP_WSBEiJ_P0065971 Pomgnt1 protein_coding protein_coding MGP_WSBEiJ_T0065972.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115978073 116002154 + Pomgnt1 protein_coding retained_intron MGP_WSBEiJ_T0065974.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115978576 116002149 + MGP_WSBEiJ_P0065974 Pomgnt1 protein_coding protein_coding MGP_WSBEiJ_T0065975.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115992824 116002149 + MGP_WSBEiJ_P0065975 Pomgnt1 protein_coding protein_coding MGP_WSBEiJ_T0065976.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115992831 116002149 + MGP_WSBEiJ_P0065976 Pomgnt1 protein_coding protein_coding MGP_WSBEiJ_T0065977.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115993737 116001742 + MGP_WSBEiJ_P0065977 Pomgnt1 protein_coding protein_coding MGP_WSBEiJ_T0065978.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115996901 115998099 + Pomgnt1 protein_coding processed_transcript MGP_WSBEiJ_T0065979.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115997625 116001299 + Pomgnt1 protein_coding retained_intron MGP_WSBEiJ_T0065980.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115998243 115998960 + Pomgnt1 protein_coding retained_intron MGP_WSBEiJ_T0065981.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115998255 116001363 + Pomgnt1 protein_coding processed_transcript MGP_WSBEiJ_T0065982.1 MGP_WSBEiJ_G0027828.1 mouse_genomes_project 4 115999698 116001330 + Pomgnt1 protein_coding retained_intron MGP_WSBEiJ_T0065823.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679071 111795484 + MGP_WSBEiJ_P0065823 Spata6 protein_coding protein_coding MGP_WSBEiJ_T0065824.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679096 111728865 + MGP_WSBEiJ_P0065824 Spata6 protein_coding protein_coding MGP_WSBEiJ_T0065825.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679097 111770904 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065826.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679125 111741344 + MGP_WSBEiJ_P0065826 Spata6 protein_coding protein_coding MGP_WSBEiJ_T0065827.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679146 111728925 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065828.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679150 111742064 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065829.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679190 111742649 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065830.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679216 111742114 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065831.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111679292 111795526 + MGP_WSBEiJ_P0065831 Spata6 protein_coding protein_coding MGP_WSBEiJ_T0065832.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111737854 111794536 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065833.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111740614 111795476 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065834.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111740653 111743348 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065835.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111769876 111789010 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0065836.1 MGP_WSBEiJ_G0027792.1 mouse_genomes_project 4 111788461 111794544 + Spata6 protein_coding processed_transcript MGP_WSBEiJ_T0098315.1 MGP_WSBEiJ_G0036978.1 mouse_genomes_project 4 151644089 151644193 - Gm24381 snRNA snRNA MGP_WSBEiJ_T0099510.1 MGP_WSBEiJ_G0038173.1 mouse_genomes_project 4 38716746 38716823 - Gm22888 snoRNA snoRNA MGP_WSBEiJ_T0014265.1 MGP_WSBEiJ_G0012395.1 mouse_genomes_project 4 100902624 100903338 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014059.1 MGP_WSBEiJ_G0012189.1 mouse_genomes_project 4 23402614 23402831 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010398.1 MGP_WSBEiJ_G0008555.1 mouse_genomes_project 4 7491268 7491399 - Mir3471-1 miRNA miRNA MGP_WSBEiJ_T0065879.1 MGP_WSBEiJ_G0027805.1 mouse_genomes_project 4 114740728 114756068 + MGP_WSBEiJ_P0065879 Tal1 protein_coding protein_coding MGP_WSBEiJ_T0065880.1 MGP_WSBEiJ_G0027805.1 mouse_genomes_project 4 114741740 114747882 + MGP_WSBEiJ_P0065880 Tal1 protein_coding protein_coding MGP_WSBEiJ_T0065881.1 MGP_WSBEiJ_G0027805.1 mouse_genomes_project 4 114742113 114755540 + MGP_WSBEiJ_P0065881 Tal1 protein_coding protein_coding MGP_WSBEiJ_T0065882.1 MGP_WSBEiJ_G0027805.1 mouse_genomes_project 4 114743807 114754781 + MGP_WSBEiJ_P0065882 Tal1 protein_coding protein_coding MGP_WSBEiJ_T0004537.1 MGP_WSBEiJ_G0003934.1 mouse_genomes_project 4 158315905 158318082 - 1500002C15Rik antisense antisense MGP_WSBEiJ_T0004538.1 MGP_WSBEiJ_G0003934.1 mouse_genomes_project 4 158315908 158317982 - 1500002C15Rik antisense antisense MGP_WSBEiJ_T0066048.1 MGP_WSBEiJ_G0027843.1 mouse_genomes_project 4 116597725 116687723 + MGP_WSBEiJ_P0066048 Tesk2 protein_coding protein_coding MGP_WSBEiJ_T0066049.1 MGP_WSBEiJ_G0027843.1 mouse_genomes_project 4 116597746 116689437 + MGP_WSBEiJ_P0066049 Tesk2 protein_coding protein_coding MGP_WSBEiJ_T0066050.1 MGP_WSBEiJ_G0027843.1 mouse_genomes_project 4 116619738 116687583 + MGP_WSBEiJ_P0066050 Tesk2 protein_coding protein_coding MGP_WSBEiJ_T0066051.1 MGP_WSBEiJ_G0027843.1 mouse_genomes_project 4 116650987 116685744 + Tesk2 protein_coding processed_transcript MGP_WSBEiJ_T0014159.1 MGP_WSBEiJ_G0012289.1 mouse_genomes_project 4 57759419 57760139 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064764.1 MGP_WSBEiJ_G0027557.1 mouse_genomes_project 4 58224974 58332414 + MGP_WSBEiJ_P0064764 Snx30 protein_coding protein_coding MGP_WSBEiJ_T0064765.1 MGP_WSBEiJ_G0027557.1 mouse_genomes_project 4 58225014 58259776 + Snx30 protein_coding processed_transcript MGP_WSBEiJ_T0064766.1 MGP_WSBEiJ_G0027557.1 mouse_genomes_project 4 58312331 58328194 + Snx30 protein_coding processed_transcript MGP_WSBEiJ_T0064767.1 MGP_WSBEiJ_G0027557.1 mouse_genomes_project 4 58312417 58322208 + Snx30 protein_coding processed_transcript MGP_WSBEiJ_T0004385.1 MGP_WSBEiJ_G0003820.1 mouse_genomes_project 4 61922092 61936770 + Aknaos antisense antisense MGP_WSBEiJ_T0014395.1 MGP_WSBEiJ_G0012525.1 mouse_genomes_project 4 150054021 150056481 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065140.1 MGP_WSBEiJ_G0027644.1 mouse_genomes_project 4 87934779 87935352 - MGP_WSBEiJ_P0065140 protein_coding protein_coding MGP_WSBEiJ_T0066525.1 MGP_WSBEiJ_G0027960.1 mouse_genomes_project 4 125048355 125056317 + MGP_WSBEiJ_P0066525 Fhl3 protein_coding protein_coding MGP_WSBEiJ_T0065241.1 MGP_WSBEiJ_G0027677.1 mouse_genomes_project 4 95920407 95944466 - MGP_WSBEiJ_P0065241 Cyp2j9 protein_coding protein_coding MGP_WSBEiJ_T0065242.1 MGP_WSBEiJ_G0027677.1 mouse_genomes_project 4 95928059 95944466 - Cyp2j9 protein_coding retained_intron MGP_WSBEiJ_T0064882.1 MGP_WSBEiJ_G0027589.1 mouse_genomes_project 4 62534366 62595191 - MGP_WSBEiJ_P0064882 Tnc protein_coding protein_coding MGP_WSBEiJ_T0064883.1 MGP_WSBEiJ_G0027589.1 mouse_genomes_project 4 62534366 62622613 - MGP_WSBEiJ_P0064883 Tnc protein_coding protein_coding MGP_WSBEiJ_T0064884.1 MGP_WSBEiJ_G0027589.1 mouse_genomes_project 4 62534366 62595191 - MGP_WSBEiJ_P0064884 Tnc protein_coding protein_coding MGP_WSBEiJ_T0064885.1 MGP_WSBEiJ_G0027589.1 mouse_genomes_project 4 62587129 62595191 - MGP_WSBEiJ_P0064885 Tnc protein_coding protein_coding MGP_WSBEiJ_T0067648.1 MGP_WSBEiJ_G0028200.1 mouse_genomes_project 4 139598518 139606340 + MGP_WSBEiJ_P0067648 Ddost protein_coding protein_coding MGP_WSBEiJ_T0099559.1 MGP_WSBEiJ_G0038222.1 mouse_genomes_project 4 123546013 123546144 + Gm25788 snoRNA snoRNA MGP_WSBEiJ_T0065016.1 MGP_WSBEiJ_G0027617.1 mouse_genomes_project 4 82469950 82501374 - MGP_WSBEiJ_P0065016 Psip1 protein_coding protein_coding MGP_WSBEiJ_T0065017.1 MGP_WSBEiJ_G0027617.1 mouse_genomes_project 4 82472345 82474411 - Psip1 protein_coding retained_intron MGP_WSBEiJ_T0065018.1 MGP_WSBEiJ_G0027617.1 mouse_genomes_project 4 82475989 82479083 - MGP_WSBEiJ_P0065018 Psip1 protein_coding protein_coding MGP_WSBEiJ_T0065019.1 MGP_WSBEiJ_G0027617.1 mouse_genomes_project 4 82475989 82501373 - MGP_WSBEiJ_P0065019 Psip1 protein_coding protein_coding MGP_WSBEiJ_T0065020.1 MGP_WSBEiJ_G0027617.1 mouse_genomes_project 4 82475989 82501368 - MGP_WSBEiJ_P0065020 Psip1 protein_coding protein_coding MGP_WSBEiJ_T0065021.1 MGP_WSBEiJ_G0027617.1 mouse_genomes_project 4 82476948 82479162 - Psip1 protein_coding retained_intron MGP_WSBEiJ_T0065023.1 MGP_WSBEiJ_G0027617.1 mouse_genomes_project 4 82490426 82501093 - MGP_WSBEiJ_P0065023 Psip1 protein_coding protein_coding MGP_WSBEiJ_T0098316.1 MGP_WSBEiJ_G0036979.1 mouse_genomes_project 4 152512319 152512429 + Gm23209 snRNA snRNA MGP_WSBEiJ_T0066474.1 MGP_WSBEiJ_G0027946.1 mouse_genomes_project 4 123485657 123501992 + MGP_WSBEiJ_P0066474 Heyl protein_coding protein_coding MGP_WSBEiJ_T0066475.1 MGP_WSBEiJ_G0027946.1 mouse_genomes_project 4 123485954 123492761 + Heyl protein_coding processed_transcript MGP_WSBEiJ_T0066476.1 MGP_WSBEiJ_G0027946.1 mouse_genomes_project 4 123491858 123498106 + Heyl protein_coding processed_transcript MGP_WSBEiJ_T0014179.1 MGP_WSBEiJ_G0012309.1 mouse_genomes_project 4 70022581 70023018 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001383.1 MGP_WSBEiJ_G0001312.1 mouse_genomes_project 4 124597116 124598390 - TEC TEC MGP_WSBEiJ_T0066752.1 MGP_WSBEiJ_G0028016.1 mouse_genomes_project 4 129385055 129419649 - MGP_WSBEiJ_P0066752 Zfp362 protein_coding protein_coding MGP_WSBEiJ_T0066753.1 MGP_WSBEiJ_G0028016.1 mouse_genomes_project 4 129385071 129408498 - MGP_WSBEiJ_P0066753 Zfp362 protein_coding protein_coding MGP_WSBEiJ_T0066754.1 MGP_WSBEiJ_G0028016.1 mouse_genomes_project 4 129389051 129419649 - MGP_WSBEiJ_P0066754 Zfp362 protein_coding protein_coding MGP_WSBEiJ_T0066755.1 MGP_WSBEiJ_G0028016.1 mouse_genomes_project 4 129401867 129402639 - Zfp362 protein_coding processed_transcript MGP_WSBEiJ_T0066637.1 MGP_WSBEiJ_G0027988.1 mouse_genomes_project 4 126793620 126797188 - MGP_WSBEiJ_P0066637 Tekt2 protein_coding protein_coding MGP_WSBEiJ_T0066638.1 MGP_WSBEiJ_G0027988.1 mouse_genomes_project 4 126793622 126796699 - MGP_WSBEiJ_P0066638 Tekt2 protein_coding protein_coding MGP_WSBEiJ_T0066639.1 MGP_WSBEiJ_G0027988.1 mouse_genomes_project 4 126795207 126797130 - Tekt2 protein_coding retained_intron MGP_WSBEiJ_T0066640.1 MGP_WSBEiJ_G0027988.1 mouse_genomes_project 4 126795839 126797143 - MGP_WSBEiJ_P0066640 Tekt2 protein_coding protein_coding MGP_WSBEiJ_T0066641.1 MGP_WSBEiJ_G0027988.1 mouse_genomes_project 4 126796383 126796935 - MGP_WSBEiJ_P0066641 Tekt2 protein_coding protein_coding MGP_WSBEiJ_T0068055.1 MGP_WSBEiJ_G0028318.1 mouse_genomes_project 4 150490512 150500764 - MGP_WSBEiJ_P0068055 Ubiad1 protein_coding protein_coding MGP_WSBEiJ_T0068056.1 MGP_WSBEiJ_G0028318.1 mouse_genomes_project 4 150492507 150500754 - Ubiad1 protein_coding processed_transcript MGP_WSBEiJ_T0066281.1 MGP_WSBEiJ_G0027897.1 mouse_genomes_project 4 119206060 119210727 - MGP_WSBEiJ_P0066281 Zfp691 protein_coding protein_coding MGP_WSBEiJ_T0066282.1 MGP_WSBEiJ_G0027897.1 mouse_genomes_project 4 119206060 119210388 - MGP_WSBEiJ_P0066282 Zfp691 protein_coding protein_coding MGP_WSBEiJ_T0066283.1 MGP_WSBEiJ_G0027897.1 mouse_genomes_project 4 119206063 119210388 - MGP_WSBEiJ_P0066283 Zfp691 protein_coding protein_coding MGP_WSBEiJ_T0066284.1 MGP_WSBEiJ_G0027897.1 mouse_genomes_project 4 119207527 119210388 - MGP_WSBEiJ_P0066284 Zfp691 protein_coding protein_coding MGP_WSBEiJ_T0014041.1 MGP_WSBEiJ_G0012171.1 mouse_genomes_project 4 18459205 18460004 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014384.1 MGP_WSBEiJ_G0012514.1 mouse_genomes_project 4 145117300 145120707 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007795.1 MGP_WSBEiJ_G0006378.1 mouse_genomes_project 4 106233049 106240565 - Tmem61 lincRNA lincRNA MGP_WSBEiJ_T0007796.1 MGP_WSBEiJ_G0006378.1 mouse_genomes_project 4 106233281 106237339 - Tmem61 lincRNA lincRNA MGP_WSBEiJ_T0099500.1 MGP_WSBEiJ_G0038163.1 mouse_genomes_project 4 10995364 10995491 + Gm24908 snoRNA snoRNA MGP_WSBEiJ_T0064504.1 MGP_WSBEiJ_G0027484.1 mouse_genomes_project 4 45268010 45326888 + MGP_WSBEiJ_P0064504 Tgfbr1 protein_coding protein_coding MGP_WSBEiJ_T0064505.1 MGP_WSBEiJ_G0027484.1 mouse_genomes_project 4 45268015 45329686 + MGP_WSBEiJ_P0064505 Tgfbr1 protein_coding protein_coding MGP_WSBEiJ_T0064506.1 MGP_WSBEiJ_G0027484.1 mouse_genomes_project 4 45268301 45276007 + Tgfbr1 protein_coding processed_transcript MGP_WSBEiJ_T0064507.1 MGP_WSBEiJ_G0027484.1 mouse_genomes_project 4 45302580 45325790 + MGP_WSBEiJ_P0064507 Tgfbr1 protein_coding protein_coding MGP_WSBEiJ_T0014369.1 MGP_WSBEiJ_G0012499.1 mouse_genomes_project 4 136809964 136810442 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067553.1 MGP_WSBEiJ_G0028182.1 mouse_genomes_project 4 138038689 138041482 - MGP_WSBEiJ_P0067553 C1qa protein_coding protein_coding MGP_WSBEiJ_T0065181.1 MGP_WSBEiJ_G0027663.1 mouse_genomes_project 4 93979602 94032630 + MGP_WSBEiJ_P0065181 Ift74 protein_coding protein_coding MGP_WSBEiJ_T0065182.1 MGP_WSBEiJ_G0027663.1 mouse_genomes_project 4 93979602 94063167 + MGP_WSBEiJ_P0065182 Ift74 protein_coding protein_coding MGP_WSBEiJ_T0065185.1 MGP_WSBEiJ_G0027663.1 mouse_genomes_project 4 94048202 94056982 + Ift74 protein_coding processed_transcript MGP_WSBEiJ_T0065319.1 MGP_WSBEiJ_G0027694.1 mouse_genomes_project 4 99227515 99244670 + Alg6 protein_coding retained_intron MGP_WSBEiJ_T0065320.1 MGP_WSBEiJ_G0027694.1 mouse_genomes_project 4 99227516 99271913 + Alg6 protein_coding retained_intron MGP_WSBEiJ_T0065321.1 MGP_WSBEiJ_G0027694.1 mouse_genomes_project 4 99227516 99273062 + MGP_WSBEiJ_P0065321 Alg6 protein_coding protein_coding MGP_WSBEiJ_T0065322.1 MGP_WSBEiJ_G0027694.1 mouse_genomes_project 4 99227527 99256045 + Alg6 protein_coding processed_transcript MGP_WSBEiJ_T0065323.1 MGP_WSBEiJ_G0027694.1 mouse_genomes_project 4 99227527 99262483 + MGP_WSBEiJ_P0065323 Alg6 protein_coding protein_coding MGP_WSBEiJ_T0065324.1 MGP_WSBEiJ_G0027694.1 mouse_genomes_project 4 99227527 99262674 + MGP_WSBEiJ_P0065324 Alg6 protein_coding protein_coding MGP_WSBEiJ_T0065325.1 MGP_WSBEiJ_G0027694.1 mouse_genomes_project 4 99232357 99247218 + Alg6 protein_coding retained_intron MGP_WSBEiJ_T0014324.1 MGP_WSBEiJ_G0012454.1 mouse_genomes_project 4 121052812 121053250 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066980.1 MGP_WSBEiJ_G0028058.1 mouse_genomes_project 4 131082983 131089857 + MGP_WSBEiJ_P0066980 Fabp3 protein_coding protein_coding MGP_WSBEiJ_T0065457.1 MGP_WSBEiJ_G0027722.1 mouse_genomes_project 4 104439393 104480805 + MGP_WSBEiJ_P0065457 C8b protein_coding protein_coding MGP_WSBEiJ_T0065458.1 MGP_WSBEiJ_G0027722.1 mouse_genomes_project 4 104439466 104479594 + MGP_WSBEiJ_P0065458 C8b protein_coding protein_coding MGP_WSBEiJ_T0065459.1 MGP_WSBEiJ_G0027722.1 mouse_genomes_project 4 104473404 104479963 + C8b protein_coding processed_transcript MGP_WSBEiJ_T0067040.1 MGP_WSBEiJ_G0028069.1 mouse_genomes_project 4 132638793 132641088 + MGP_WSBEiJ_P0067040 Tmem200b protein_coding protein_coding MGP_WSBEiJ_T0066629.1 MGP_WSBEiJ_G0027985.1 mouse_genomes_project 4 126730058 126745516 + MGP_WSBEiJ_P0066629 Trappc3 protein_coding protein_coding MGP_WSBEiJ_T0066630.1 MGP_WSBEiJ_G0027985.1 mouse_genomes_project 4 126730133 126742028 + Trappc3 protein_coding processed_transcript MGP_WSBEiJ_T0064040.1 MGP_WSBEiJ_G0027397.1 mouse_genomes_project 4 39191430 39234846 - MGP_WSBEiJ_P0064040 Cntfr protein_coding protein_coding MGP_WSBEiJ_T0064041.1 MGP_WSBEiJ_G0027397.1 mouse_genomes_project 4 39191430 39236459 - MGP_WSBEiJ_P0064041 Cntfr protein_coding protein_coding MGP_WSBEiJ_T0064042.1 MGP_WSBEiJ_G0027397.1 mouse_genomes_project 4 39197189 39197956 - Cntfr protein_coding processed_transcript MGP_WSBEiJ_T0064043.1 MGP_WSBEiJ_G0027397.1 mouse_genomes_project 4 39203336 39234849 - MGP_WSBEiJ_P0064043 Cntfr protein_coding protein_coding MGP_WSBEiJ_T0064044.1 MGP_WSBEiJ_G0027397.1 mouse_genomes_project 4 39203336 39236508 - MGP_WSBEiJ_P0064044 Cntfr protein_coding protein_coding MGP_WSBEiJ_T0064045.1 MGP_WSBEiJ_G0027397.1 mouse_genomes_project 4 39204644 39235339 - MGP_WSBEiJ_P0064045 Cntfr protein_coding protein_coding MGP_WSBEiJ_T0066082.1 MGP_WSBEiJ_G0027850.1 mouse_genomes_project 4 116915583 116970818 + MGP_WSBEiJ_P0066082 Eif2b3 protein_coding protein_coding MGP_WSBEiJ_T0066083.1 MGP_WSBEiJ_G0027850.1 mouse_genomes_project 4 116915589 116985478 + MGP_WSBEiJ_P0066083 Eif2b3 protein_coding protein_coding MGP_WSBEiJ_T0066084.1 MGP_WSBEiJ_G0027850.1 mouse_genomes_project 4 116940886 116955671 + Eif2b3 protein_coding processed_transcript MGP_WSBEiJ_T0066085.1 MGP_WSBEiJ_G0027850.1 mouse_genomes_project 4 116962856 116971858 + Eif2b3 protein_coding processed_transcript MGP_WSBEiJ_T0066086.1 MGP_WSBEiJ_G0027850.1 mouse_genomes_project 4 116963849 116984481 + Eif2b3 protein_coding processed_transcript MGP_WSBEiJ_T0066087.1 MGP_WSBEiJ_G0027850.1 mouse_genomes_project 4 116978847 116984023 + Eif2b3 protein_coding processed_transcript MGP_WSBEiJ_T0098301.1 MGP_WSBEiJ_G0036964.1 mouse_genomes_project 4 133334359 133334463 - Gm24762 snRNA snRNA MGP_WSBEiJ_T0068494.1 MGP_WSBEiJ_G0028397.1 mouse_genomes_project 4 157443380 157449374 - MGP_WSBEiJ_P0068494 Tnfrsf14 protein_coding protein_coding MGP_WSBEiJ_T0068495.1 MGP_WSBEiJ_G0028397.1 mouse_genomes_project 4 157443380 157449249 - MGP_WSBEiJ_P0068495 Tnfrsf14 protein_coding protein_coding MGP_WSBEiJ_T0068496.1 MGP_WSBEiJ_G0028397.1 mouse_genomes_project 4 157443414 157449218 - MGP_WSBEiJ_P0068496 Tnfrsf14 protein_coding unknown_likely_coding MGP_WSBEiJ_T0068497.1 MGP_WSBEiJ_G0028397.1 mouse_genomes_project 4 157443431 157449724 - MGP_WSBEiJ_P0068497 Tnfrsf14 protein_coding protein_coding MGP_WSBEiJ_T0068498.1 MGP_WSBEiJ_G0028397.1 mouse_genomes_project 4 157445644 157449724 - Tnfrsf14 protein_coding processed_transcript MGP_WSBEiJ_T0068499.1 MGP_WSBEiJ_G0028397.1 mouse_genomes_project 4 157447799 157449735 - Tnfrsf14 protein_coding processed_transcript MGP_WSBEiJ_T0010468.1 MGP_WSBEiJ_G0008625.1 mouse_genomes_project 4 137731452 137731511 - Gm22180 miRNA miRNA MGP_WSBEiJ_T0067627.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139503317 139535062 + MGP_WSBEiJ_P0067627 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067628.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139503644 139508922 + Hp1bp3 protein_coding processed_transcript MGP_WSBEiJ_T0067629.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139503649 139535065 + MGP_WSBEiJ_P0067629 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067630.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139503670 139515362 + MGP_WSBEiJ_P0067630 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067631.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139503671 139533535 + MGP_WSBEiJ_P0067631 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067632.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139503678 139518094 + MGP_WSBEiJ_P0067632 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067633.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139503679 139535062 + MGP_WSBEiJ_P0067633 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067634.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139504171 139519086 + MGP_WSBEiJ_P0067634 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067635.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139504318 139519073 + Hp1bp3 protein_coding retained_intron MGP_WSBEiJ_T0067636.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139504344 139510800 + MGP_WSBEiJ_P0067636 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067637.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139517901 139531122 + MGP_WSBEiJ_P0067637 Hp1bp3 protein_coding protein_coding MGP_WSBEiJ_T0067638.1 MGP_WSBEiJ_G0028197.1 mouse_genomes_project 4 139518985 139524992 + Hp1bp3 protein_coding processed_transcript MGP_WSBEiJ_T0063870.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31824050 31867518 - MGP_WSBEiJ_P0063870 Orc3 protein_coding protein_coding MGP_WSBEiJ_T0063871.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31824050 31867487 - MGP_WSBEiJ_P0063871 Orc3 protein_coding protein_coding MGP_WSBEiJ_T0063872.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31824819 31850959 - Orc3 protein_coding processed_transcript MGP_WSBEiJ_T0063873.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31825648 31830158 - Orc3 protein_coding processed_transcript MGP_WSBEiJ_T0063874.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31830904 31867485 - Orc3 protein_coding processed_transcript MGP_WSBEiJ_T0063875.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31844740 31847396 - Orc3 protein_coding processed_transcript MGP_WSBEiJ_T0063876.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31845266 31867467 - MGP_WSBEiJ_P0063876 Orc3 protein_coding protein_coding MGP_WSBEiJ_T0063877.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31850909 31867477 - Orc3 protein_coding processed_transcript MGP_WSBEiJ_T0063878.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31850997 31867483 - Orc3 protein_coding processed_transcript MGP_WSBEiJ_T0063879.1 MGP_WSBEiJ_G0027356.1 mouse_genomes_project 4 31851583 31867478 - Orc3 protein_coding processed_transcript MGP_WSBEiJ_T0067135.1 MGP_WSBEiJ_G0028088.1 mouse_genomes_project 4 133566641 133577293 + Rpa2 protein_coding processed_transcript MGP_WSBEiJ_T0067136.1 MGP_WSBEiJ_G0028088.1 mouse_genomes_project 4 133566644 133579323 + MGP_WSBEiJ_P0067136 Rpa2 protein_coding protein_coding MGP_WSBEiJ_T0067137.1 MGP_WSBEiJ_G0028088.1 mouse_genomes_project 4 133566685 133574818 + Rpa2 protein_coding retained_intron MGP_WSBEiJ_T0067138.1 MGP_WSBEiJ_G0028088.1 mouse_genomes_project 4 133566944 133570392 + Rpa2 protein_coding retained_intron MGP_WSBEiJ_T0067139.1 MGP_WSBEiJ_G0028088.1 mouse_genomes_project 4 133568739 133570580 + Rpa2 protein_coding retained_intron MGP_WSBEiJ_T0067140.1 MGP_WSBEiJ_G0028088.1 mouse_genomes_project 4 133575710 133577731 + MGP_WSBEiJ_P0067140 Rpa2 protein_coding protein_coding MGP_WSBEiJ_T0098239.1 MGP_WSBEiJ_G0036902.1 mouse_genomes_project 4 28295230 28295334 - Gm25705 snRNA snRNA MGP_WSBEiJ_T0064636.1 MGP_WSBEiJ_G0027524.1 mouse_genomes_project 4 54983727 54985166 - MGP_WSBEiJ_P0064636 Actl7b protein_coding protein_coding MGP_WSBEiJ_T0065710.1 MGP_WSBEiJ_G0027772.1 mouse_genomes_project 4 108493887 108635348 - MGP_WSBEiJ_P0065710 protein_coding protein_coding MGP_WSBEiJ_T0065711.1 MGP_WSBEiJ_G0027772.1 mouse_genomes_project 4 108493887 108635633 - MGP_WSBEiJ_P0065711 protein_coding protein_coding MGP_WSBEiJ_T0065712.1 MGP_WSBEiJ_G0027772.1 mouse_genomes_project 4 108495678 108576305 - MGP_WSBEiJ_P0065712 protein_coding protein_coding MGP_WSBEiJ_T0007825.1 MGP_WSBEiJ_G0006399.1 mouse_genomes_project 4 124910223 124915666 + 4933407E24Rik lincRNA lincRNA MGP_WSBEiJ_T0007885.1 MGP_WSBEiJ_G0006442.1 mouse_genomes_project 4 141931971 141955202 + Gm13026 lincRNA lincRNA MGP_WSBEiJ_T0099518.1 MGP_WSBEiJ_G0038181.1 mouse_genomes_project 4 48344654 48344786 + Gm25485 snoRNA snoRNA MGP_WSBEiJ_T0068560.1 MGP_WSBEiJ_G0028407.1 mouse_genomes_project 4 157945656 157959869 - Gabrd protein_coding processed_transcript MGP_WSBEiJ_T0068561.1 MGP_WSBEiJ_G0028407.1 mouse_genomes_project 4 157945656 157959934 - MGP_WSBEiJ_P0068561 Gabrd protein_coding protein_coding MGP_WSBEiJ_T0068562.1 MGP_WSBEiJ_G0028407.1 mouse_genomes_project 4 157949241 157959858 - Gabrd protein_coding processed_transcript MGP_WSBEiJ_T0067818.1 MGP_WSBEiJ_G0028245.1 mouse_genomes_project 4 142632323 142662255 + MGP_WSBEiJ_P0067818 Spata21 protein_coding protein_coding MGP_WSBEiJ_T0067819.1 MGP_WSBEiJ_G0028245.1 mouse_genomes_project 4 142652479 142661038 + Spata21 protein_coding retained_intron MGP_WSBEiJ_T0068439.1 MGP_WSBEiJ_G0028385.1 mouse_genomes_project 4 156494746 156512317 - MGP_WSBEiJ_P0068439 Ccdc27 protein_coding protein_coding MGP_WSBEiJ_T0066704.1 MGP_WSBEiJ_G0028001.1 mouse_genomes_project 4 127608250 127642091 + Zmym6 protein_coding processed_transcript MGP_WSBEiJ_T0066705.1 MGP_WSBEiJ_G0028001.1 mouse_genomes_project 4 127609099 127621420 + Zmym6 protein_coding processed_transcript MGP_WSBEiJ_T0066706.1 MGP_WSBEiJ_G0028001.1 mouse_genomes_project 4 127609265 127661111 + MGP_WSBEiJ_P0066706 Zmym6 protein_coding protein_coding MGP_WSBEiJ_T0066707.1 MGP_WSBEiJ_G0028001.1 mouse_genomes_project 4 127617387 127621563 + Zmym6 protein_coding processed_transcript MGP_WSBEiJ_T0066708.1 MGP_WSBEiJ_G0028001.1 mouse_genomes_project 4 127637342 127641969 + Zmym6 protein_coding processed_transcript MGP_WSBEiJ_T0065605.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107602722 107676325 + MGP_WSBEiJ_P0065605 Lrp8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065606.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107602738 107674974 + MGP_WSBEiJ_P0065606 Lrp8 protein_coding protein_coding MGP_WSBEiJ_T0065607.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107602775 107676057 + MGP_WSBEiJ_P0065607 Lrp8 protein_coding protein_coding MGP_WSBEiJ_T0065608.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107602874 107674974 + MGP_WSBEiJ_P0065608 Lrp8 protein_coding protein_coding MGP_WSBEiJ_T0065609.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107602874 107674476 + MGP_WSBEiJ_P0065609 Lrp8 protein_coding protein_coding MGP_WSBEiJ_T0065610.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107603303 107653831 + Lrp8 protein_coding processed_transcript MGP_WSBEiJ_T0065611.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107603712 107674974 + Lrp8 protein_coding processed_transcript MGP_WSBEiJ_T0065612.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107624695 107674974 + Lrp8 protein_coding processed_transcript MGP_WSBEiJ_T0065613.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107632451 107638710 + Lrp8 protein_coding retained_intron MGP_WSBEiJ_T0065614.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107632471 107678998 + MGP_WSBEiJ_P0065614 Lrp8 protein_coding protein_coding MGP_WSBEiJ_T0065615.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107648669 107650764 + Lrp8 protein_coding retained_intron MGP_WSBEiJ_T0065616.1 MGP_WSBEiJ_G0027755.1 mouse_genomes_project 4 107652596 107659335 + Lrp8 protein_coding processed_transcript MGP_WSBEiJ_T0063697.1 MGP_WSBEiJ_G0027313.1 mouse_genomes_project 4 16469236 16515835 + MGP_WSBEiJ_P0063697 Gm12353 protein_coding protein_coding MGP_WSBEiJ_T0014115.1 MGP_WSBEiJ_G0012245.1 mouse_genomes_project 4 42892764 42893123 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098317.1 MGP_WSBEiJ_G0036980.1 mouse_genomes_project 4 153202724 153202884 + Gm23405 snRNA snRNA MGP_WSBEiJ_T0067440.1 MGP_WSBEiJ_G0028154.1 mouse_genomes_project 4 136736985 136758678 + MGP_WSBEiJ_P0067440 Ifnlr1 protein_coding protein_coding MGP_WSBEiJ_T0067339.1 MGP_WSBEiJ_G0028133.1 mouse_genomes_project 4 135347320 135373424 + Pafah2 protein_coding processed_transcript MGP_WSBEiJ_T0067340.1 MGP_WSBEiJ_G0028133.1 mouse_genomes_project 4 135347357 135367264 + Pafah2 protein_coding processed_transcript MGP_WSBEiJ_T0067341.1 MGP_WSBEiJ_G0028133.1 mouse_genomes_project 4 135348226 135365112 + Pafah2 protein_coding processed_transcript MGP_WSBEiJ_T0067342.1 MGP_WSBEiJ_G0028133.1 mouse_genomes_project 4 135348460 135383791 + MGP_WSBEiJ_P0067342 Pafah2 protein_coding protein_coding MGP_WSBEiJ_T0067343.1 MGP_WSBEiJ_G0028133.1 mouse_genomes_project 4 135357082 135359236 + MGP_WSBEiJ_P0067343 Pafah2 protein_coding protein_coding MGP_WSBEiJ_T0067344.1 MGP_WSBEiJ_G0028133.1 mouse_genomes_project 4 135357140 135377869 + Pafah2 protein_coding processed_transcript MGP_WSBEiJ_T0066864.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296972 130303665 + MGP_WSBEiJ_P0066864 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066865.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296972 130305240 + MGP_WSBEiJ_P0066865 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066866.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296973 130316517 + MGP_WSBEiJ_P0066866 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066867.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296984 130305651 + MGP_WSBEiJ_P0066867 Tmem234 protein_coding protein_coding MGP_WSBEiJ_T0066868.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296985 130303654 + MGP_WSBEiJ_P0066868 Tmem234 protein_coding protein_coding MGP_WSBEiJ_T0066869.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296991 130303844 + MGP_WSBEiJ_P0066869 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066870.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296995 130303689 + MGP_WSBEiJ_P0066870 Tmem234 protein_coding protein_coding MGP_WSBEiJ_T0066871.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296995 130303923 + MGP_WSBEiJ_P0066871 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066872.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296995 130320785 + MGP_WSBEiJ_P0066872 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066873.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130296999 130303932 + MGP_WSBEiJ_P0066873 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066874.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297004 130305644 + MGP_WSBEiJ_P0066874 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066875.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297005 130303269 + MGP_WSBEiJ_P0066875 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066876.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297006 130303958 + Tmem234 protein_coding retained_intron MGP_WSBEiJ_T0066877.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297007 130303286 + MGP_WSBEiJ_P0066877 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066878.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297008 130299004 + Tmem234 protein_coding processed_transcript MGP_WSBEiJ_T0066879.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297011 130297754 + MGP_WSBEiJ_P0066879 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066880.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297287 130303800 + MGP_WSBEiJ_P0066880 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066881.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297287 130298235 + MGP_WSBEiJ_P0066881 Tmem234 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066882.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297392 130298055 + Tmem234 protein_coding retained_intron MGP_WSBEiJ_T0066883.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130297496 130298522 + Tmem234 protein_coding retained_intron MGP_WSBEiJ_T0066884.1 MGP_WSBEiJ_G0028040.1 mouse_genomes_project 4 130298315 130303437 + Tmem234 protein_coding retained_intron MGP_WSBEiJ_T0067475.1 MGP_WSBEiJ_G0028163.1 mouse_genomes_project 4 137044830 137049237 - MGP_WSBEiJ_P0067475 Lypla2 protein_coding protein_coding MGP_WSBEiJ_T0067476.1 MGP_WSBEiJ_G0028163.1 mouse_genomes_project 4 137044830 137048540 - MGP_WSBEiJ_P0067476 Lypla2 protein_coding protein_coding MGP_WSBEiJ_T0067477.1 MGP_WSBEiJ_G0028163.1 mouse_genomes_project 4 137045307 137047077 - Lypla2 protein_coding retained_intron MGP_WSBEiJ_T0067478.1 MGP_WSBEiJ_G0028163.1 mouse_genomes_project 4 137045370 137049199 - Lypla2 protein_coding retained_intron MGP_WSBEiJ_T0067479.1 MGP_WSBEiJ_G0028163.1 mouse_genomes_project 4 137047256 137049214 - Lypla2 protein_coding retained_intron MGP_WSBEiJ_T0007698.1 MGP_WSBEiJ_G0006295.1 mouse_genomes_project 4 21291503 21292019 - Gm27243 lincRNA lincRNA MGP_WSBEiJ_T0000316.1 MGP_WSBEiJ_G0000264.1 mouse_genomes_project 4 90378731 90378801 - Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0010482.1 MGP_WSBEiJ_G0008639.1 mouse_genomes_project 4 152233344 152233446 + Mir34a miRNA miRNA MGP_WSBEiJ_T0013993.1 MGP_WSBEiJ_G0012123.1 mouse_genomes_project 4 1619485 1619853 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007734.1 MGP_WSBEiJ_G0006326.1 mouse_genomes_project 4 53794807 53827319 + Gm12506 lincRNA lincRNA MGP_WSBEiJ_T0068117.1 MGP_WSBEiJ_G0028329.1 mouse_genomes_project 4 151232523 151234255 - MGP_WSBEiJ_P0068117 Cort protein_coding protein_coding MGP_WSBEiJ_T0063467.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583649 588297 + MGP_WSBEiJ_P0063467 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063468.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583649 588292 + MGP_WSBEiJ_P0063468 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063469.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583651 588241 + MGP_WSBEiJ_P0063469 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063470.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583675 588290 + MGP_WSBEiJ_P0063470 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063471.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583675 588297 + MGP_WSBEiJ_P0063471 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063472.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583675 595808 + MGP_WSBEiJ_P0063472 Chchd7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063473.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583675 588297 + MGP_WSBEiJ_P0063473 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063474.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583675 587819 + MGP_WSBEiJ_P0063474 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063475.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583681 588273 + MGP_WSBEiJ_P0063475 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063476.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 583804 588175 + MGP_WSBEiJ_P0063476 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063477.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 584183 586183 + Chchd7 protein_coding retained_intron MGP_WSBEiJ_T0063478.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 584261 588295 + MGP_WSBEiJ_P0063478 Chchd7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063479.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 585617 588294 + MGP_WSBEiJ_P0063479 Chchd7 protein_coding protein_coding MGP_WSBEiJ_T0063480.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 588182 594973 + Chchd7 protein_coding processed_transcript MGP_WSBEiJ_T0063481.1 MGP_WSBEiJ_G0027260.1 mouse_genomes_project 4 591574 594634 + Chchd7 protein_coding retained_intron MGP_WSBEiJ_T0004487.1 MGP_WSBEiJ_G0003896.1 mouse_genomes_project 4 141616939 141618700 + Gm13029 antisense antisense MGP_WSBEiJ_T0011384.1 MGP_WSBEiJ_G0009541.1 mouse_genomes_project 4 134004383 134004671 - Gm24636 misc_RNA misc_RNA MGP_WSBEiJ_T0010463.1 MGP_WSBEiJ_G0008620.1 mouse_genomes_project 4 134611756 134611815 - Mir7227 miRNA miRNA MGP_WSBEiJ_T0096821.1 MGP_WSBEiJ_G0035502.1 mouse_genomes_project 4 3060911 3063786 - pseudogene pseudogene MGP_WSBEiJ_T0011382.1 MGP_WSBEiJ_G0009539.1 mouse_genomes_project 4 121297161 121297480 + Gm22982 misc_RNA misc_RNA MGP_WSBEiJ_T0064813.1 MGP_WSBEiJ_G0027573.1 mouse_genomes_project 4 61011578 61036525 + MGP_WSBEiJ_P0064813 4933430I17Rik protein_coding protein_coding MGP_WSBEiJ_T0064814.1 MGP_WSBEiJ_G0027573.1 mouse_genomes_project 4 61011583 61036294 + MGP_WSBEiJ_P0064814 4933430I17Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0065281.1 MGP_WSBEiJ_G0027685.1 mouse_genomes_project 4 98152333 98160930 + MGP_WSBEiJ_P0065281 L1td1 protein_coding protein_coding MGP_WSBEiJ_T0065282.1 MGP_WSBEiJ_G0027685.1 mouse_genomes_project 4 98152347 98165744 + MGP_WSBEiJ_P0065282 L1td1 protein_coding protein_coding MGP_WSBEiJ_T0065283.1 MGP_WSBEiJ_G0027685.1 mouse_genomes_project 4 98152392 98160846 + MGP_WSBEiJ_P0065283 L1td1 protein_coding protein_coding MGP_WSBEiJ_T0065284.1 MGP_WSBEiJ_G0027685.1 mouse_genomes_project 4 98160488 98165379 + MGP_WSBEiJ_P0065284 L1td1 protein_coding protein_coding MGP_WSBEiJ_T0014002.1 MGP_WSBEiJ_G0012132.1 mouse_genomes_project 4 5067685 5068018 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007806.1 MGP_WSBEiJ_G0006384.1 mouse_genomes_project 4 108489022 108493863 - Gm17354 lincRNA lincRNA MGP_WSBEiJ_T0007884.1 MGP_WSBEiJ_G0006441.1 mouse_genomes_project 4 141917628 141925035 + Gm13021 lincRNA lincRNA MGP_WSBEiJ_T0004383.1 MGP_WSBEiJ_G0003818.1 mouse_genomes_project 4 60589350 60600410 + Gm12910 antisense antisense MGP_WSBEiJ_T0014258.1 MGP_WSBEiJ_G0012388.1 mouse_genomes_project 4 98925492 98926491 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014383.1 MGP_WSBEiJ_G0012513.1 mouse_genomes_project 4 144830809 144831274 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064746.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57870961 57951022 - MGP_WSBEiJ_P0064746 Ptbp3 protein_coding protein_coding MGP_WSBEiJ_T0064747.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57874348 57951151 - MGP_WSBEiJ_P0064747 Ptbp3 protein_coding protein_coding MGP_WSBEiJ_T0064748.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57876024 57884845 - Ptbp3 protein_coding retained_intron MGP_WSBEiJ_T0064749.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57879797 57893153 - MGP_WSBEiJ_P0064749 Ptbp3 protein_coding protein_coding MGP_WSBEiJ_T0064750.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57879802 57951119 - MGP_WSBEiJ_P0064750 Ptbp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064751.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57893056 57951124 - MGP_WSBEiJ_P0064751 Ptbp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064752.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57893106 57951132 - MGP_WSBEiJ_P0064752 Ptbp3 protein_coding protein_coding MGP_WSBEiJ_T0064753.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57901871 57915268 - Ptbp3 protein_coding retained_intron MGP_WSBEiJ_T0064754.1 MGP_WSBEiJ_G0027553.1 mouse_genomes_project 4 57919294 57950604 - MGP_WSBEiJ_P0064754 Ptbp3 protein_coding protein_coding MGP_WSBEiJ_T0066464.1 MGP_WSBEiJ_G0027943.1 mouse_genomes_project 4 123375894 123388659 - MGP_WSBEiJ_P0066464 Ppie protein_coding protein_coding MGP_WSBEiJ_T0066465.1 MGP_WSBEiJ_G0027943.1 mouse_genomes_project 4 123376099 123385604 - Ppie protein_coding processed_transcript MGP_WSBEiJ_T0066466.1 MGP_WSBEiJ_G0027943.1 mouse_genomes_project 4 123376480 123387731 - Ppie protein_coding processed_transcript MGP_WSBEiJ_T0066467.1 MGP_WSBEiJ_G0027943.1 mouse_genomes_project 4 123385107 123388638 - Ppie protein_coding processed_transcript MGP_WSBEiJ_T0064577.1 MGP_WSBEiJ_G0027505.1 mouse_genomes_project 4 47704119 47707368 - MGP_WSBEiJ_P0064577 Ppp3r2 protein_coding protein_coding MGP_WSBEiJ_T0063509.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3011279 3070693 - Nsmaf protein_coding retained_intron MGP_WSBEiJ_T0063510.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3011279 3070693 - MGP_WSBEiJ_P0063510 Nsmaf protein_coding protein_coding MGP_WSBEiJ_T0063511.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3011483 3014077 - Nsmaf protein_coding retained_intron MGP_WSBEiJ_T0063512.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3011841 3070518 - Nsmaf protein_coding processed_transcript MGP_WSBEiJ_T0063513.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3021379 3070677 - Nsmaf protein_coding processed_transcript MGP_WSBEiJ_T0063514.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3023997 3039731 - Nsmaf protein_coding retained_intron MGP_WSBEiJ_T0063515.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3040312 3047420 - Nsmaf protein_coding retained_intron MGP_WSBEiJ_T0063516.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3044198 3070001 - Nsmaf protein_coding processed_transcript MGP_WSBEiJ_T0063517.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3045477 3062201 - Nsmaf protein_coding processed_transcript MGP_WSBEiJ_T0063518.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3047993 3070519 - MGP_WSBEiJ_P0063518 Nsmaf protein_coding protein_coding MGP_WSBEiJ_T0063519.1 MGP_WSBEiJ_G0027269.1 mouse_genomes_project 4 3052634 3060266 - Nsmaf protein_coding processed_transcript MGP_WSBEiJ_T0063463.1 MGP_WSBEiJ_G0027259.1 mouse_genomes_project 4 544294 582390 - MGP_WSBEiJ_P0063463 Plag1 protein_coding protein_coding MGP_WSBEiJ_T0063464.1 MGP_WSBEiJ_G0027259.1 mouse_genomes_project 4 548190 582413 - MGP_WSBEiJ_P0063464 Plag1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063465.1 MGP_WSBEiJ_G0027259.1 mouse_genomes_project 4 548849 582431 - MGP_WSBEiJ_P0063465 Plag1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063466.1 MGP_WSBEiJ_G0027259.1 mouse_genomes_project 4 555182 582401 - Plag1 protein_coding retained_intron MGP_WSBEiJ_T0064771.1 MGP_WSBEiJ_G0027560.1 mouse_genomes_project 4 60621024 60623472 - MGP_WSBEiJ_P0064771 Mup21 protein_coding protein_coding MGP_WSBEiJ_T0063933.1 MGP_WSBEiJ_G0027370.1 mouse_genomes_project 4 37597737 37653992 + MGP_WSBEiJ_P0063933 Aco1 protein_coding protein_coding MGP_WSBEiJ_T0063934.1 MGP_WSBEiJ_G0027370.1 mouse_genomes_project 4 37618335 37623932 + Aco1 protein_coding processed_transcript MGP_WSBEiJ_T0063935.1 MGP_WSBEiJ_G0027370.1 mouse_genomes_project 4 37621487 37630963 + Aco1 protein_coding processed_transcript MGP_WSBEiJ_T0063936.1 MGP_WSBEiJ_G0027370.1 mouse_genomes_project 4 37645676 37652058 + Aco1 protein_coding processed_transcript MGP_WSBEiJ_T0063968.1 MGP_WSBEiJ_G0027377.1 mouse_genomes_project 4 38177999 38203777 - MGP_WSBEiJ_P0063968 Smu1 protein_coding protein_coding MGP_WSBEiJ_T0063969.1 MGP_WSBEiJ_G0027377.1 mouse_genomes_project 4 38185234 38203737 - Smu1 protein_coding processed_transcript MGP_WSBEiJ_T0063970.1 MGP_WSBEiJ_G0027377.1 mouse_genomes_project 4 38199102 38203685 - Smu1 protein_coding processed_transcript MGP_WSBEiJ_T0063971.1 MGP_WSBEiJ_G0027377.1 mouse_genomes_project 4 38200420 38203252 - Smu1 protein_coding processed_transcript MGP_WSBEiJ_T0064907.1 MGP_WSBEiJ_G0027597.1 mouse_genomes_project 4 70486523 70488847 - MGP_WSBEiJ_P0064907 Gm11232 protein_coding protein_coding MGP_WSBEiJ_T0007882.1 MGP_WSBEiJ_G0006439.1 mouse_genomes_project 4 141872498 141877447 + Gm13016 lincRNA lincRNA MGP_WSBEiJ_T0100833.1 MGP_WSBEiJ_G0039291.1 mouse_genomes_project 4 117050832 117054220 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0066414.1 MGP_WSBEiJ_G0027925.1 mouse_genomes_project 4 121075054 121079917 - MGP_WSBEiJ_P0066414 Exo5 protein_coding protein_coding MGP_WSBEiJ_T0066415.1 MGP_WSBEiJ_G0027925.1 mouse_genomes_project 4 121075054 121075883 - MGP_WSBEiJ_P0066415 Exo5 protein_coding protein_coding MGP_WSBEiJ_T0066416.1 MGP_WSBEiJ_G0027925.1 mouse_genomes_project 4 121075060 121079917 - MGP_WSBEiJ_P0066416 Exo5 protein_coding protein_coding MGP_WSBEiJ_T0066417.1 MGP_WSBEiJ_G0027925.1 mouse_genomes_project 4 121076127 121079929 - MGP_WSBEiJ_P0066417 Exo5 protein_coding protein_coding MGP_WSBEiJ_T0063756.1 MGP_WSBEiJ_G0027328.1 mouse_genomes_project 4 19333357 19340626 - MGP_WSBEiJ_P0063756 Pou3f2 protein_coding protein_coding MGP_WSBEiJ_T0066562.1 MGP_WSBEiJ_G0027970.1 mouse_genomes_project 4 125386903 125411169 + MGP_WSBEiJ_P0066562 Gnl2 protein_coding protein_coding MGP_WSBEiJ_T0066563.1 MGP_WSBEiJ_G0027970.1 mouse_genomes_project 4 125401131 125429500 + MGP_WSBEiJ_P0066563 Gnl2 protein_coding protein_coding MGP_WSBEiJ_T0066564.1 MGP_WSBEiJ_G0027970.1 mouse_genomes_project 4 125401197 125415365 + Gnl2 protein_coding processed_transcript MGP_WSBEiJ_T0066565.1 MGP_WSBEiJ_G0027970.1 mouse_genomes_project 4 125415078 125417041 + Gnl2 protein_coding processed_transcript MGP_WSBEiJ_T0066566.1 MGP_WSBEiJ_G0027970.1 mouse_genomes_project 4 125417352 125420386 + Gnl2 protein_coding processed_transcript MGP_WSBEiJ_T0066567.1 MGP_WSBEiJ_G0027970.1 mouse_genomes_project 4 125427274 125429504 + Gnl2 protein_coding processed_transcript MGP_WSBEiJ_T0007858.1 MGP_WSBEiJ_G0006420.1 mouse_genomes_project 4 132395327 132411176 - Gm16080 lincRNA lincRNA MGP_WSBEiJ_T0014346.1 MGP_WSBEiJ_G0012476.1 mouse_genomes_project 4 127017604 127017947 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004427.1 MGP_WSBEiJ_G0003847.1 mouse_genomes_project 4 109875526 109876601 - Dmrta2os antisense antisense MGP_WSBEiJ_T0004428.1 MGP_WSBEiJ_G0003847.1 mouse_genomes_project 4 109875535 109876279 - Dmrta2os antisense antisense MGP_WSBEiJ_T0014199.1 MGP_WSBEiJ_G0012329.1 mouse_genomes_project 4 75626031 75626425 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068139.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151451967 151554070 - MGP_WSBEiJ_P0068139 Ube4b protein_coding protein_coding MGP_WSBEiJ_T0068140.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151451973 151458668 - MGP_WSBEiJ_P0068140 Ube4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068141.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151453048 151455382 - Ube4b protein_coding processed_transcript MGP_WSBEiJ_T0068142.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151453225 151553226 - MGP_WSBEiJ_P0068142 Ube4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068143.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151453225 151553226 - MGP_WSBEiJ_P0068143 Ube4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068144.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151458755 151459662 - Ube4b protein_coding processed_transcript MGP_WSBEiJ_T0068145.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151474998 151475976 - Ube4b protein_coding retained_intron MGP_WSBEiJ_T0068146.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151489662 151553952 - Ube4b protein_coding retained_intron MGP_WSBEiJ_T0068147.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151510348 151553921 - Ube4b protein_coding processed_transcript MGP_WSBEiJ_T0068148.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151512329 151512945 - Ube4b protein_coding processed_transcript MGP_WSBEiJ_T0068149.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151524837 151553537 - Ube4b protein_coding retained_intron MGP_WSBEiJ_T0068150.1 MGP_WSBEiJ_G0028333.1 mouse_genomes_project 4 151524849 151525720 - Ube4b protein_coding processed_transcript MGP_WSBEiJ_T0014125.1 MGP_WSBEiJ_G0012255.1 mouse_genomes_project 4 47333577 47333908 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064467.1 MGP_WSBEiJ_G0027475.1 mouse_genomes_project 4 44309631 44331901 + MGP_WSBEiJ_P0064467 Anp32b protein_coding protein_coding MGP_WSBEiJ_T0098266.1 MGP_WSBEiJ_G0036929.1 mouse_genomes_project 4 92218502 92218610 - Gm22605 snRNA snRNA MGP_WSBEiJ_T0064580.1 MGP_WSBEiJ_G0027506.1 mouse_genomes_project 4 49284685 49299422 + MGP_WSBEiJ_P0064580 Cylc2 protein_coding protein_coding MGP_WSBEiJ_T0064581.1 MGP_WSBEiJ_G0027506.1 mouse_genomes_project 4 49284685 49299078 + MGP_WSBEiJ_P0064581 Cylc2 protein_coding protein_coding MGP_WSBEiJ_T0065094.1 MGP_WSBEiJ_G0027629.1 mouse_genomes_project 4 86041954 86090419 + MGP_WSBEiJ_P0065094 Acer2 protein_coding protein_coding MGP_WSBEiJ_T0065095.1 MGP_WSBEiJ_G0027629.1 mouse_genomes_project 4 86041972 86101798 + Acer2 protein_coding processed_transcript MGP_WSBEiJ_T0065096.1 MGP_WSBEiJ_G0027629.1 mouse_genomes_project 4 86041972 86090419 + MGP_WSBEiJ_P0065096 Acer2 protein_coding protein_coding MGP_WSBEiJ_T0065097.1 MGP_WSBEiJ_G0027629.1 mouse_genomes_project 4 86100159 86104128 + Acer2 protein_coding processed_transcript MGP_WSBEiJ_T0067772.1 MGP_WSBEiJ_G0028236.1 mouse_genomes_project 4 142277191 142308580 - MGP_WSBEiJ_P0067772 Padi4 protein_coding protein_coding MGP_WSBEiJ_T0067773.1 MGP_WSBEiJ_G0028236.1 mouse_genomes_project 4 142283526 142290156 - Padi4 protein_coding processed_transcript MGP_WSBEiJ_T0067774.1 MGP_WSBEiJ_G0028236.1 mouse_genomes_project 4 142288136 142294009 - Padi4 protein_coding processed_transcript MGP_WSBEiJ_T0067775.1 MGP_WSBEiJ_G0028236.1 mouse_genomes_project 4 142290324 142294002 - Padi4 protein_coding processed_transcript MGP_WSBEiJ_T0099541.1 MGP_WSBEiJ_G0038204.1 mouse_genomes_project 4 88488978 88489118 - Gm26490 snoRNA snoRNA MGP_WSBEiJ_T0098256.1 MGP_WSBEiJ_G0036919.1 mouse_genomes_project 4 56066062 56066166 + Gm24277 snRNA snRNA MGP_WSBEiJ_T0066839.1 MGP_WSBEiJ_G0028033.1 mouse_genomes_project 4 130170729 130172738 - MGP_WSBEiJ_P0066839 Tssk3 protein_coding protein_coding MGP_WSBEiJ_T0014009.1 MGP_WSBEiJ_G0012139.1 mouse_genomes_project 4 7601510 7601996 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065658.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107991403 108005700 + MGP_WSBEiJ_P0065658 Echdc2 protein_coding protein_coding MGP_WSBEiJ_T0065659.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107991432 108005463 + MGP_WSBEiJ_P0065659 Echdc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065660.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107991432 108005699 + MGP_WSBEiJ_P0065660 Echdc2 protein_coding protein_coding MGP_WSBEiJ_T0065661.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107991454 108005698 + MGP_WSBEiJ_P0065661 Echdc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065662.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107991484 108005460 + MGP_WSBEiJ_P0065662 Echdc2 protein_coding protein_coding MGP_WSBEiJ_T0065663.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107996062 108005324 + MGP_WSBEiJ_P0065663 Echdc2 protein_coding protein_coding MGP_WSBEiJ_T0065664.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107996134 108001754 + Echdc2 protein_coding retained_intron MGP_WSBEiJ_T0065665.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107996490 108005699 + Echdc2 protein_coding processed_transcript MGP_WSBEiJ_T0065666.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107996501 108000196 + Echdc2 protein_coding processed_transcript MGP_WSBEiJ_T0065667.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107998504 108005551 + MGP_WSBEiJ_P0065667 Echdc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065668.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 107999007 108003484 + Echdc2 protein_coding retained_intron MGP_WSBEiJ_T0065669.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 108000034 108005451 + Echdc2 protein_coding retained_intron MGP_WSBEiJ_T0065670.1 MGP_WSBEiJ_G0027762.1 mouse_genomes_project 4 108000154 108005480 + MGP_WSBEiJ_P0065670 Echdc2 protein_coding protein_coding MGP_WSBEiJ_T0063669.1 MGP_WSBEiJ_G0027302.1 mouse_genomes_project 4 12021667 12055100 + MGP_WSBEiJ_P0063669 Tmem64 protein_coding protein_coding MGP_WSBEiJ_T0065243.1 MGP_WSBEiJ_G0027678.1 mouse_genomes_project 4 95977868 96005755 - MGP_WSBEiJ_P0065243 Cyp2j5 protein_coding protein_coding MGP_WSBEiJ_T0063639.1 MGP_WSBEiJ_G0027294.1 mouse_genomes_project 4 8874751 8878931 + Rbm12b2 protein_coding processed_transcript MGP_WSBEiJ_T0063640.1 MGP_WSBEiJ_G0027294.1 mouse_genomes_project 4 8874754 8881328 + MGP_WSBEiJ_P0063640 Rbm12b2 protein_coding protein_coding MGP_WSBEiJ_T0063641.1 MGP_WSBEiJ_G0027294.1 mouse_genomes_project 4 8874772 8879271 + Rbm12b2 protein_coding processed_transcript MGP_WSBEiJ_T0063642.1 MGP_WSBEiJ_G0027294.1 mouse_genomes_project 4 8874804 8881328 + MGP_WSBEiJ_P0063642 Rbm12b2 protein_coding protein_coding MGP_WSBEiJ_T0098271.1 MGP_WSBEiJ_G0036934.1 mouse_genomes_project 4 97798496 97798586 - Gm24960 snRNA snRNA MGP_WSBEiJ_T0007841.1 MGP_WSBEiJ_G0006410.1 mouse_genomes_project 4 129920478 129923504 + Gm12976 lincRNA lincRNA MGP_WSBEiJ_T0007842.1 MGP_WSBEiJ_G0006410.1 mouse_genomes_project 4 129922232 129923504 + Gm12976 lincRNA lincRNA MGP_WSBEiJ_T0007743.1 MGP_WSBEiJ_G0006333.1 mouse_genomes_project 4 57657197 57660232 + Gm12596 lincRNA lincRNA MGP_WSBEiJ_T0068550.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157809592 157901748 - MGP_WSBEiJ_P0068550 Prkcz protein_coding protein_coding MGP_WSBEiJ_T0068551.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157811175 157918981 - MGP_WSBEiJ_P0068551 Prkcz protein_coding protein_coding MGP_WSBEiJ_T0068552.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157811554 157817769 - Prkcz protein_coding processed_transcript MGP_WSBEiJ_T0068553.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157822201 157824110 - Prkcz protein_coding processed_transcript MGP_WSBEiJ_T0068554.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157822241 157918818 - MGP_WSBEiJ_P0068554 Prkcz protein_coding protein_coding MGP_WSBEiJ_T0068555.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157845528 157901128 - MGP_WSBEiJ_P0068555 Prkcz protein_coding protein_coding MGP_WSBEiJ_T0068556.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157845531 157901225 - Prkcz protein_coding processed_transcript MGP_WSBEiJ_T0068557.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157849300 157856215 - Prkcz protein_coding processed_transcript MGP_WSBEiJ_T0068558.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157849375 157900703 - Prkcz protein_coding processed_transcript MGP_WSBEiJ_T0068559.1 MGP_WSBEiJ_G0028406.1 mouse_genomes_project 4 157913833 157918960 - MGP_WSBEiJ_P0068559 Prkcz protein_coding protein_coding MGP_WSBEiJ_T0067379.1 MGP_WSBEiJ_G0028143.1 mouse_genomes_project 4 135900745 135919897 - MGP_WSBEiJ_P0067379 Tmem50a protein_coding protein_coding MGP_WSBEiJ_T0067380.1 MGP_WSBEiJ_G0028143.1 mouse_genomes_project 4 135901287 135919888 - MGP_WSBEiJ_P0067380 Tmem50a protein_coding protein_coding MGP_WSBEiJ_T0014197.1 MGP_WSBEiJ_G0012327.1 mouse_genomes_project 4 75211528 75212467 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010464.1 MGP_WSBEiJ_G0008621.1 mouse_genomes_project 4 135432570 135432661 + Gm23634 miRNA miRNA MGP_WSBEiJ_T0065144.1 MGP_WSBEiJ_G0027648.1 mouse_genomes_project 4 88080029 88080602 + MGP_WSBEiJ_P0065144 protein_coding protein_coding MGP_WSBEiJ_T0068446.1 MGP_WSBEiJ_G0028387.1 mouse_genomes_project 4 156617862 156634448 + MGP_WSBEiJ_P0068446 protein_coding unknown_likely_coding MGP_WSBEiJ_T0068447.1 MGP_WSBEiJ_G0028387.1 mouse_genomes_project 4 156618786 156634584 + protein_coding processed_transcript MGP_WSBEiJ_T0068448.1 MGP_WSBEiJ_G0028387.1 mouse_genomes_project 4 156629705 156633048 + MGP_WSBEiJ_P0068448 protein_coding protein_coding MGP_WSBEiJ_T0068449.1 MGP_WSBEiJ_G0028387.1 mouse_genomes_project 4 156632982 156647789 + protein_coding processed_transcript MGP_WSBEiJ_T0007754.1 MGP_WSBEiJ_G0006344.1 mouse_genomes_project 4 80750065 80754704 + Gm11412 lincRNA lincRNA MGP_WSBEiJ_T0014138.1 MGP_WSBEiJ_G0012268.1 mouse_genomes_project 4 51444223 51444670 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099577.1 MGP_WSBEiJ_G0038240.1 mouse_genomes_project 4 144882268 144882400 + Gm22039 snoRNA snoRNA MGP_WSBEiJ_T0067718.1 MGP_WSBEiJ_G0028223.1 mouse_genomes_project 4 140746359 140748587 - Mrto4 protein_coding processed_transcript MGP_WSBEiJ_T0067719.1 MGP_WSBEiJ_G0028223.1 mouse_genomes_project 4 140746399 140751465 - MGP_WSBEiJ_P0067719 Mrto4 protein_coding protein_coding MGP_WSBEiJ_T0067720.1 MGP_WSBEiJ_G0028223.1 mouse_genomes_project 4 140747097 140748605 - Mrto4 protein_coding retained_intron MGP_WSBEiJ_T0067721.1 MGP_WSBEiJ_G0028223.1 mouse_genomes_project 4 140747698 140751282 - MGP_WSBEiJ_P0067721 Mrto4 protein_coding protein_coding MGP_WSBEiJ_T0067722.1 MGP_WSBEiJ_G0028223.1 mouse_genomes_project 4 140747760 140751504 - Mrto4 protein_coding retained_intron MGP_WSBEiJ_T0067723.1 MGP_WSBEiJ_G0028223.1 mouse_genomes_project 4 140748858 140751281 - Mrto4 protein_coding retained_intron MGP_WSBEiJ_T0010456.1 MGP_WSBEiJ_G0008613.1 mouse_genomes_project 4 130476691 130476817 - Gm28017 miRNA miRNA MGP_WSBEiJ_T0014247.1 MGP_WSBEiJ_G0012377.1 mouse_genomes_project 4 94928798 94929126 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014210.1 MGP_WSBEiJ_G0012340.1 mouse_genomes_project 4 80442070 80448430 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063744.1 MGP_WSBEiJ_G0027325.1 mouse_genomes_project 4 18712750 18744587 + MGP_WSBEiJ_P0063744 Coq3 protein_coding protein_coding MGP_WSBEiJ_T0063745.1 MGP_WSBEiJ_G0027325.1 mouse_genomes_project 4 18730930 18732659 + Coq3 protein_coding processed_transcript MGP_WSBEiJ_T0017503.1 MGP_WSBEiJ_G0014997.1 mouse_genomes_project 4 126795098 126796737 + Gm12945 processed_transcript processed_transcript MGP_WSBEiJ_T0067951.1 MGP_WSBEiJ_G0028283.1 mouse_genomes_project 4 145973327 145976671 - MGP_WSBEiJ_P0067951 protein_coding protein_coding MGP_WSBEiJ_T0004499.1 MGP_WSBEiJ_G0003906.1 mouse_genomes_project 4 143703301 143707382 + Tmem51os1 antisense antisense MGP_WSBEiJ_T0004500.1 MGP_WSBEiJ_G0003906.1 mouse_genomes_project 4 143703630 143707435 + Tmem51os1 antisense antisense MGP_WSBEiJ_T0004501.1 MGP_WSBEiJ_G0003906.1 mouse_genomes_project 4 143703672 143707375 + Tmem51os1 antisense antisense MGP_WSBEiJ_T0004502.1 MGP_WSBEiJ_G0003906.1 mouse_genomes_project 4 143704188 143707413 + Tmem51os1 antisense antisense MGP_WSBEiJ_T0063779.1 MGP_WSBEiJ_G0027333.1 mouse_genomes_project 4 22057983 22102524 - MGP_WSBEiJ_P0063779 Fhl5 protein_coding protein_coding MGP_WSBEiJ_T0063780.1 MGP_WSBEiJ_G0027333.1 mouse_genomes_project 4 22057983 22102524 - MGP_WSBEiJ_P0063780 Fhl5 protein_coding protein_coding MGP_WSBEiJ_T0099569.1 MGP_WSBEiJ_G0038232.1 mouse_genomes_project 4 133074027 133074163 + Snora16a snoRNA snoRNA MGP_WSBEiJ_T0065787.1 MGP_WSBEiJ_G0027785.1 mouse_genomes_project 4 109384837 109412199 - MGP_WSBEiJ_P0065787 4930522H14Rik protein_coding protein_coding MGP_WSBEiJ_T0065788.1 MGP_WSBEiJ_G0027785.1 mouse_genomes_project 4 109384865 109412106 - MGP_WSBEiJ_P0065788 4930522H14Rik protein_coding protein_coding MGP_WSBEiJ_T0067796.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142554910 142567518 - Crocc protein_coding retained_intron MGP_WSBEiJ_T0067797.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142554910 142560405 - Crocc protein_coding retained_intron MGP_WSBEiJ_T0067798.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142554910 142600684 - MGP_WSBEiJ_P0067798 Crocc protein_coding protein_coding MGP_WSBEiJ_T0067799.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142554910 142593876 - MGP_WSBEiJ_P0067799 Crocc protein_coding protein_coding MGP_WSBEiJ_T0067800.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142554913 142593815 - MGP_WSBEiJ_P0067800 Crocc protein_coding protein_coding MGP_WSBEiJ_T0067801.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142554913 142598334 - MGP_WSBEiJ_P0067801 Crocc protein_coding protein_coding MGP_WSBEiJ_T0067802.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142555257 142557080 - Crocc protein_coding retained_intron MGP_WSBEiJ_T0067803.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142558004 142560797 - Crocc protein_coding retained_intron MGP_WSBEiJ_T0067804.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142559818 142560827 - Crocc protein_coding retained_intron MGP_WSBEiJ_T0067805.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142583847 142598244 - Crocc protein_coding retained_intron MGP_WSBEiJ_T0067806.1 MGP_WSBEiJ_G0028243.1 mouse_genomes_project 4 142585088 142600679 - MGP_WSBEiJ_P0067806 Crocc protein_coding protein_coding MGP_WSBEiJ_T0004529.1 MGP_WSBEiJ_G0003928.1 mouse_genomes_project 4 157055826 157063207 + Gm13133 antisense antisense MGP_WSBEiJ_T0017484.1 MGP_WSBEiJ_G0014988.1 mouse_genomes_project 4 109528556 109535969 - 9630013D21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017485.1 MGP_WSBEiJ_G0014988.1 mouse_genomes_project 4 109529511 109535995 - 9630013D21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017486.1 MGP_WSBEiJ_G0014988.1 mouse_genomes_project 4 109529638 109532273 - 9630013D21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017487.1 MGP_WSBEiJ_G0014988.1 mouse_genomes_project 4 109531094 109535750 - 9630013D21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0064161.1 MGP_WSBEiJ_G0027420.1 mouse_genomes_project 4 40909828 40987854 + Atp8b5 protein_coding retained_intron MGP_WSBEiJ_T0064162.1 MGP_WSBEiJ_G0027420.1 mouse_genomes_project 4 40909839 41018534 + MGP_WSBEiJ_P0064162 Atp8b5 protein_coding protein_coding MGP_WSBEiJ_T0064163.1 MGP_WSBEiJ_G0027420.1 mouse_genomes_project 4 40909854 41018536 + MGP_WSBEiJ_P0064163 Atp8b5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064164.1 MGP_WSBEiJ_G0027420.1 mouse_genomes_project 4 40909854 40967103 + MGP_WSBEiJ_P0064164 Atp8b5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064165.1 MGP_WSBEiJ_G0027420.1 mouse_genomes_project 4 40909860 40968800 + MGP_WSBEiJ_P0064165 Atp8b5 protein_coding protein_coding MGP_WSBEiJ_T0010419.1 MGP_WSBEiJ_G0008576.1 mouse_genomes_project 4 42329542 42329620 - Mir5120 miRNA miRNA MGP_WSBEiJ_T0004535.1 MGP_WSBEiJ_G0003932.1 mouse_genomes_project 4 157566264 157569642 + Gm10564 antisense antisense MGP_WSBEiJ_T0007790.1 MGP_WSBEiJ_G0006374.1 mouse_genomes_project 4 102901717 102924159 + 4930456L15Rik lincRNA lincRNA MGP_WSBEiJ_T0007789.1 MGP_WSBEiJ_G0006373.1 mouse_genomes_project 4 102826214 102829640 + lincRNA lincRNA MGP_WSBEiJ_T0007730.1 MGP_WSBEiJ_G0006323.1 mouse_genomes_project 4 53294941 53444779 - Gm12514 lincRNA lincRNA MGP_WSBEiJ_T0007731.1 MGP_WSBEiJ_G0006323.1 mouse_genomes_project 4 53295178 53299238 - Gm12514 lincRNA lincRNA MGP_WSBEiJ_T0010469.1 MGP_WSBEiJ_G0008626.1 mouse_genomes_project 4 138749815 138749900 + Mir7018 miRNA miRNA MGP_WSBEiJ_T0014010.1 MGP_WSBEiJ_G0012140.1 mouse_genomes_project 4 7810327 7810609 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066653.1 MGP_WSBEiJ_G0027991.1 mouse_genomes_project 4 126980545 127026744 - MGP_WSBEiJ_P0066653 Ago4 protein_coding protein_coding MGP_WSBEiJ_T0066654.1 MGP_WSBEiJ_G0027991.1 mouse_genomes_project 4 127008848 127010282 - Ago4 protein_coding processed_transcript MGP_WSBEiJ_T0063819.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29827693 29947143 + MGP_WSBEiJ_P0063819 Mdn1 protein_coding protein_coding MGP_WSBEiJ_T0063820.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29827693 29947153 + MGP_WSBEiJ_P0063820 Mdn1 protein_coding protein_coding MGP_WSBEiJ_T0063821.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29827757 29834739 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0063822.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29842135 29850109 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0063823.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29866031 29867092 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0063824.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29876491 29947134 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0063825.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29894727 29903273 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0063826.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29897692 29900048 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0063827.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29922142 29925314 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0063828.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29922142 29923236 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0063829.1 MGP_WSBEiJ_G0027342.1 mouse_genomes_project 4 29934132 29936291 + Mdn1 protein_coding processed_transcript MGP_WSBEiJ_T0064611.1 MGP_WSBEiJ_G0027517.1 mouse_genomes_project 4 51778536 51852630 + MGP_WSBEiJ_P0064611 Fsd1l protein_coding protein_coding MGP_WSBEiJ_T0064612.1 MGP_WSBEiJ_G0027517.1 mouse_genomes_project 4 51778555 51798869 + Fsd1l protein_coding retained_intron MGP_WSBEiJ_T0064613.1 MGP_WSBEiJ_G0027517.1 mouse_genomes_project 4 51778556 51794975 + Fsd1l protein_coding retained_intron MGP_WSBEiJ_T0064614.1 MGP_WSBEiJ_G0027517.1 mouse_genomes_project 4 51778634 51846268 + MGP_WSBEiJ_P0064614 Fsd1l protein_coding protein_coding MGP_WSBEiJ_T0064615.1 MGP_WSBEiJ_G0027517.1 mouse_genomes_project 4 51778639 51846266 + MGP_WSBEiJ_P0064615 Fsd1l protein_coding protein_coding MGP_WSBEiJ_T0064616.1 MGP_WSBEiJ_G0027517.1 mouse_genomes_project 4 51778781 51808147 + MGP_WSBEiJ_P0064616 Fsd1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064617.1 MGP_WSBEiJ_G0027517.1 mouse_genomes_project 4 51790355 51852630 + MGP_WSBEiJ_P0064617 Fsd1l protein_coding protein_coding MGP_WSBEiJ_T0014130.1 MGP_WSBEiJ_G0012260.1 mouse_genomes_project 4 49256859 49257216 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064495.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45117571 45227192 + MGP_WSBEiJ_P0064495 Col15a1 protein_coding protein_coding MGP_WSBEiJ_T0064496.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45117571 45227196 + MGP_WSBEiJ_P0064496 Col15a1 protein_coding protein_coding MGP_WSBEiJ_T0064497.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45145905 45157931 + Col15a1 protein_coding processed_transcript MGP_WSBEiJ_T0064498.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45170887 45174377 + Col15a1 protein_coding processed_transcript MGP_WSBEiJ_T0064499.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45171208 45174566 + Col15a1 protein_coding processed_transcript MGP_WSBEiJ_T0064500.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45201220 45206406 + MGP_WSBEiJ_P0064500 Col15a1 protein_coding protein_coding MGP_WSBEiJ_T0064501.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45201232 45227196 + MGP_WSBEiJ_P0064501 Col15a1 protein_coding protein_coding MGP_WSBEiJ_T0064502.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45201450 45212436 + MGP_WSBEiJ_P0064502 Col15a1 protein_coding protein_coding MGP_WSBEiJ_T0064503.1 MGP_WSBEiJ_G0027483.1 mouse_genomes_project 4 45217830 45227191 + MGP_WSBEiJ_P0064503 Col15a1 protein_coding protein_coding MGP_WSBEiJ_T0067192.1 MGP_WSBEiJ_G0028101.1 mouse_genomes_project 4 134140284 134193229 - MGP_WSBEiJ_P0067192 Wdtc1 protein_coding protein_coding MGP_WSBEiJ_T0067193.1 MGP_WSBEiJ_G0028101.1 mouse_genomes_project 4 134157108 134206768 - Wdtc1 protein_coding processed_transcript MGP_WSBEiJ_T0067194.1 MGP_WSBEiJ_G0028101.1 mouse_genomes_project 4 134161382 134172246 - Wdtc1 protein_coding processed_transcript MGP_WSBEiJ_T0067195.1 MGP_WSBEiJ_G0028101.1 mouse_genomes_project 4 134162007 134207343 - Wdtc1 protein_coding processed_transcript MGP_WSBEiJ_T0013999.1 MGP_WSBEiJ_G0012129.1 mouse_genomes_project 4 3160599 3162483 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014048.1 MGP_WSBEiJ_G0012178.1 mouse_genomes_project 4 20331391 20332592 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014090.1 MGP_WSBEiJ_G0012220.1 mouse_genomes_project 4 32111444 32112112 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098249.1 MGP_WSBEiJ_G0036912.1 mouse_genomes_project 4 38865225 38865329 - Gm26084 snRNA snRNA MGP_WSBEiJ_T0065148.1 MGP_WSBEiJ_G0027652.1 mouse_genomes_project 4 88439044 88487087 + MGP_WSBEiJ_P0065148 Mtap protein_coding protein_coding MGP_WSBEiJ_T0065149.1 MGP_WSBEiJ_G0027652.1 mouse_genomes_project 4 88482451 88485482 + Mtap protein_coding processed_transcript MGP_WSBEiJ_T0014338.1 MGP_WSBEiJ_G0012468.1 mouse_genomes_project 4 124145146 124146545 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007700.1 MGP_WSBEiJ_G0006297.1 mouse_genomes_project 4 26141997 26163108 + Gm11917 lincRNA lincRNA MGP_WSBEiJ_T0100839.1 MGP_WSBEiJ_G0039297.1 mouse_genomes_project 4 122800004 122824357 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100823.1 MGP_WSBEiJ_G0039281.1 mouse_genomes_project 4 95555969 95556147 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0068730.1 MGP_WSBEiJ_G0028439.1 mouse_genomes_project 4 158634688 158653821 - MGP_WSBEiJ_P0068730 Ttll10 protein_coding protein_coding MGP_WSBEiJ_T0068731.1 MGP_WSBEiJ_G0028439.1 mouse_genomes_project 4 158634761 158663999 - MGP_WSBEiJ_P0068731 Ttll10 protein_coding protein_coding MGP_WSBEiJ_T0068732.1 MGP_WSBEiJ_G0028439.1 mouse_genomes_project 4 158635154 158653468 - MGP_WSBEiJ_P0068732 Ttll10 protein_coding protein_coding MGP_WSBEiJ_T0068733.1 MGP_WSBEiJ_G0028439.1 mouse_genomes_project 4 158635659 158646970 - Ttll10 protein_coding processed_transcript MGP_WSBEiJ_T0068734.1 MGP_WSBEiJ_G0028439.1 mouse_genomes_project 4 158645311 158663926 - Ttll10 protein_coding retained_intron MGP_WSBEiJ_T0068735.1 MGP_WSBEiJ_G0028439.1 mouse_genomes_project 4 158646044 158647830 - Ttll10 protein_coding processed_transcript MGP_WSBEiJ_T0068736.1 MGP_WSBEiJ_G0028439.1 mouse_genomes_project 4 158646054 158650972 - Ttll10 protein_coding processed_transcript MGP_WSBEiJ_T0068737.1 MGP_WSBEiJ_G0028439.1 mouse_genomes_project 4 158649786 158650940 - Ttll10 protein_coding retained_intron MGP_WSBEiJ_T0065314.1 MGP_WSBEiJ_G0027691.1 mouse_genomes_project 4 98672884 98743270 + MGP_WSBEiJ_P0065314 Atg4c protein_coding protein_coding MGP_WSBEiJ_T0065315.1 MGP_WSBEiJ_G0027691.1 mouse_genomes_project 4 98673097 98743266 + MGP_WSBEiJ_P0065315 Atg4c protein_coding protein_coding MGP_WSBEiJ_T0065316.1 MGP_WSBEiJ_G0027691.1 mouse_genomes_project 4 98699486 98705141 + Atg4c protein_coding processed_transcript MGP_WSBEiJ_T0067369.1 MGP_WSBEiJ_G0028140.1 mouse_genomes_project 4 135725634 135751968 - MGP_WSBEiJ_P0067369 Ldlrap1 protein_coding protein_coding MGP_WSBEiJ_T0067370.1 MGP_WSBEiJ_G0028140.1 mouse_genomes_project 4 135730653 135734192 - Ldlrap1 protein_coding retained_intron MGP_WSBEiJ_T0067371.1 MGP_WSBEiJ_G0028140.1 mouse_genomes_project 4 135733500 135734933 - Ldlrap1 protein_coding retained_intron MGP_WSBEiJ_T0065986.1 MGP_WSBEiJ_G0027831.1 mouse_genomes_project 4 116015472 116016391 + MGP_WSBEiJ_P0065986 1700042G07Rik protein_coding protein_coding MGP_WSBEiJ_T0014307.1 MGP_WSBEiJ_G0012437.1 mouse_genomes_project 4 116762656 116763533 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014356.1 MGP_WSBEiJ_G0012486.1 mouse_genomes_project 4 132823588 132823996 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067938.1 MGP_WSBEiJ_G0028277.1 mouse_genomes_project 4 145144067 145152726 + MGP_WSBEiJ_P0067938 Pramef8 protein_coding protein_coding MGP_WSBEiJ_T0067939.1 MGP_WSBEiJ_G0028277.1 mouse_genomes_project 4 145144613 145148477 + MGP_WSBEiJ_P0067939 Pramef8 protein_coding protein_coding MGP_WSBEiJ_T0067940.1 MGP_WSBEiJ_G0028277.1 mouse_genomes_project 4 145144628 145152726 + MGP_WSBEiJ_P0067940 Pramef8 protein_coding protein_coding MGP_WSBEiJ_T0067941.1 MGP_WSBEiJ_G0028277.1 mouse_genomes_project 4 145144650 145149303 + MGP_WSBEiJ_P0067941 Pramef8 protein_coding protein_coding MGP_WSBEiJ_T0067942.1 MGP_WSBEiJ_G0028277.1 mouse_genomes_project 4 145144651 145146011 + Pramef8 protein_coding processed_transcript MGP_WSBEiJ_T0014244.1 MGP_WSBEiJ_G0012374.1 mouse_genomes_project 4 93856140 93856717 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010403.1 MGP_WSBEiJ_G0008560.1 mouse_genomes_project 4 12731232 12731324 - Mir6400 miRNA miRNA MGP_WSBEiJ_T0067668.1 MGP_WSBEiJ_G0028208.1 mouse_genomes_project 4 140076802 140099455 + MGP_WSBEiJ_P0067668 Pla2g2c protein_coding protein_coding MGP_WSBEiJ_T0067669.1 MGP_WSBEiJ_G0028208.1 mouse_genomes_project 4 140077334 140097016 + MGP_WSBEiJ_P0067669 Pla2g2c protein_coding protein_coding MGP_WSBEiJ_T0067670.1 MGP_WSBEiJ_G0028208.1 mouse_genomes_project 4 140077334 140097897 + MGP_WSBEiJ_P0067670 Pla2g2c protein_coding protein_coding MGP_WSBEiJ_T0064388.1 MGP_WSBEiJ_G0027456.1 mouse_genomes_project 4 42779278 42830997 - MGP_WSBEiJ_P0064388 Fbxo10 protein_coding protein_coding MGP_WSBEiJ_T0064389.1 MGP_WSBEiJ_G0027456.1 mouse_genomes_project 4 42779279 42807999 - MGP_WSBEiJ_P0064389 Fbxo10 protein_coding protein_coding MGP_WSBEiJ_T0064390.1 MGP_WSBEiJ_G0027456.1 mouse_genomes_project 4 42792288 42804613 - Fbxo10 protein_coding processed_transcript MGP_WSBEiJ_T0014092.1 MGP_WSBEiJ_G0012222.1 mouse_genomes_project 4 32220253 32220595 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099558.1 MGP_WSBEiJ_G0038221.1 mouse_genomes_project 4 121676525 121676655 + Gm26162 snoRNA snoRNA MGP_WSBEiJ_T0014357.1 MGP_WSBEiJ_G0012487.1 mouse_genomes_project 4 132996629 132996950 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017495.1 MGP_WSBEiJ_G0014995.1 mouse_genomes_project 4 125087906 125105199 - Gm12915 processed_transcript processed_transcript MGP_WSBEiJ_T0065720.1 MGP_WSBEiJ_G0027775.1 mouse_genomes_project 4 108691096 108720664 + MGP_WSBEiJ_P0065720 Txndc12 protein_coding protein_coding MGP_WSBEiJ_T0065721.1 MGP_WSBEiJ_G0027775.1 mouse_genomes_project 4 108691130 108703906 + Txndc12 protein_coding processed_transcript MGP_WSBEiJ_T0065724.1 MGP_WSBEiJ_G0027775.1 mouse_genomes_project 4 108709876 108720665 + MGP_WSBEiJ_P0065724 Txndc12 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065725.1 MGP_WSBEiJ_G0027775.1 mouse_genomes_project 4 108716028 108717819 + Txndc12 protein_coding processed_transcript MGP_WSBEiJ_T0096827.1 MGP_WSBEiJ_G0035508.1 mouse_genomes_project 4 143132023 143133727 + pseudogene pseudogene MGP_WSBEiJ_T0063976.1 MGP_WSBEiJ_G0027380.1 mouse_genomes_project 4 38405415 38417285 - MGP_WSBEiJ_P0063976 Bag1 protein_coding protein_coding MGP_WSBEiJ_T0063977.1 MGP_WSBEiJ_G0027380.1 mouse_genomes_project 4 38405416 38417298 - MGP_WSBEiJ_P0063977 Bag1 protein_coding protein_coding MGP_WSBEiJ_T0063978.1 MGP_WSBEiJ_G0027380.1 mouse_genomes_project 4 38405418 38417247 - MGP_WSBEiJ_P0063978 Bag1 protein_coding protein_coding MGP_WSBEiJ_T0065892.1 MGP_WSBEiJ_G0027810.1 mouse_genomes_project 4 115173337 115193884 + MGP_WSBEiJ_P0065892 Cyp4a12b protein_coding protein_coding MGP_WSBEiJ_T0065893.1 MGP_WSBEiJ_G0027810.1 mouse_genomes_project 4 115173425 115193887 + MGP_WSBEiJ_P0065893 Cyp4a12b protein_coding unknown_likely_coding MGP_WSBEiJ_T0067504.1 MGP_WSBEiJ_G0028169.1 mouse_genomes_project 4 137305440 137348679 + MGP_WSBEiJ_P0067504 Asap3 protein_coding protein_coding MGP_WSBEiJ_T0068745.1 MGP_WSBEiJ_G0028441.1 mouse_genomes_project 4 158772930 158776727 - Agrn protein_coding retained_intron MGP_WSBEiJ_T0068746.1 MGP_WSBEiJ_G0028441.1 mouse_genomes_project 4 158772930 158793542 - MGP_WSBEiJ_P0068746 Agrn protein_coding protein_coding MGP_WSBEiJ_T0068747.1 MGP_WSBEiJ_G0028441.1 mouse_genomes_project 4 158772930 158793542 - MGP_WSBEiJ_P0068747 Agrn protein_coding protein_coding MGP_WSBEiJ_T0068748.1 MGP_WSBEiJ_G0028441.1 mouse_genomes_project 4 158772930 158793542 - MGP_WSBEiJ_P0068748 Agrn protein_coding protein_coding MGP_WSBEiJ_T0068749.1 MGP_WSBEiJ_G0028441.1 mouse_genomes_project 4 158772934 158793748 - Agrn protein_coding retained_intron MGP_WSBEiJ_T0068750.1 MGP_WSBEiJ_G0028441.1 mouse_genomes_project 4 158773418 158805133 - MGP_WSBEiJ_P0068750 Agrn protein_coding protein_coding MGP_WSBEiJ_T0068751.1 MGP_WSBEiJ_G0028441.1 mouse_genomes_project 4 158779939 158781371 - Agrn protein_coding processed_transcript MGP_WSBEiJ_T0097393.1 MGP_WSBEiJ_G0036067.1 mouse_genomes_project 4 99627959 99629180 + Gm12701 sense_intronic sense_intronic MGP_WSBEiJ_T0067334.1 MGP_WSBEiJ_G0028131.1 mouse_genomes_project 4 135296735 135308830 + MGP_WSBEiJ_P0067334 Slc30a2 protein_coding protein_coding MGP_WSBEiJ_T0067335.1 MGP_WSBEiJ_G0028131.1 mouse_genomes_project 4 135296840 135308690 + MGP_WSBEiJ_P0067335 Slc30a2 protein_coding protein_coding MGP_WSBEiJ_T0100091.1 MGP_WSBEiJ_G0038698.1 mouse_genomes_project 4 58259346 58259889 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0067392.1 MGP_WSBEiJ_G0028146.1 mouse_genomes_project 4 136139392 136197790 + MGP_WSBEiJ_P0067392 Runx3 protein_coding protein_coding MGP_WSBEiJ_T0067393.1 MGP_WSBEiJ_G0028146.1 mouse_genomes_project 4 136171220 136195980 + MGP_WSBEiJ_P0067393 Runx3 protein_coding protein_coding MGP_WSBEiJ_T0067394.1 MGP_WSBEiJ_G0028146.1 mouse_genomes_project 4 136171662 136174316 + Runx3 protein_coding retained_intron MGP_WSBEiJ_T0067395.1 MGP_WSBEiJ_G0028146.1 mouse_genomes_project 4 136171884 136174078 + Runx3 protein_coding processed_transcript MGP_WSBEiJ_T0067396.1 MGP_WSBEiJ_G0028146.1 mouse_genomes_project 4 136172229 136174133 + Runx3 protein_coding processed_transcript MGP_WSBEiJ_T0067397.1 MGP_WSBEiJ_G0028146.1 mouse_genomes_project 4 136173142 136174049 + Runx3 protein_coding processed_transcript MGP_WSBEiJ_T0065465.1 MGP_WSBEiJ_G0027726.1 mouse_genomes_project 4 104709108 104792847 - MGP_WSBEiJ_P0065465 Prkaa2 protein_coding protein_coding MGP_WSBEiJ_T0067827.1 MGP_WSBEiJ_G0028248.1 mouse_genomes_project 4 142764537 142770519 + MGP_WSBEiJ_P0067827 Rsg1 protein_coding protein_coding MGP_WSBEiJ_T0067828.1 MGP_WSBEiJ_G0028248.1 mouse_genomes_project 4 142765026 142769048 + Rsg1 protein_coding processed_transcript MGP_WSBEiJ_T0067829.1 MGP_WSBEiJ_G0028248.1 mouse_genomes_project 4 142769019 142779864 + Rsg1 protein_coding processed_transcript MGP_WSBEiJ_T0065172.1 MGP_WSBEiJ_G0027660.1 mouse_genomes_project 4 93860086 93917994 - MGP_WSBEiJ_P0065172 Caap1 protein_coding protein_coding MGP_WSBEiJ_T0065173.1 MGP_WSBEiJ_G0027660.1 mouse_genomes_project 4 93910904 93917964 - Caap1 protein_coding processed_transcript MGP_WSBEiJ_T0064047.1 MGP_WSBEiJ_G0027399.1 mouse_genomes_project 4 39256883 39265260 - MGP_WSBEiJ_P0064047 Dctn3 protein_coding protein_coding MGP_WSBEiJ_T0064048.1 MGP_WSBEiJ_G0027399.1 mouse_genomes_project 4 39256883 39265253 - MGP_WSBEiJ_P0064048 Dctn3 protein_coding protein_coding MGP_WSBEiJ_T0064049.1 MGP_WSBEiJ_G0027399.1 mouse_genomes_project 4 39261853 39265227 - Dctn3 protein_coding processed_transcript MGP_WSBEiJ_T0065987.1 MGP_WSBEiJ_G0027832.1 mouse_genomes_project 4 116065542 116109767 + MGP_WSBEiJ_P0065987 Pik3r3 protein_coding protein_coding MGP_WSBEiJ_T0065988.1 MGP_WSBEiJ_G0027832.1 mouse_genomes_project 4 116065585 116154030 + MGP_WSBEiJ_P0065988 Pik3r3 protein_coding protein_coding MGP_WSBEiJ_T0065989.1 MGP_WSBEiJ_G0027832.1 mouse_genomes_project 4 116065620 116150815 + MGP_WSBEiJ_P0065989 Pik3r3 protein_coding protein_coding MGP_WSBEiJ_T0014094.1 MGP_WSBEiJ_G0012224.1 mouse_genomes_project 4 32719871 32720439 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068755.1 MGP_WSBEiJ_G0028445.1 mouse_genomes_project 4 158834017 158841069 - MGP_WSBEiJ_P0068755 Plekhn1 protein_coding protein_coding MGP_WSBEiJ_T0068756.1 MGP_WSBEiJ_G0028445.1 mouse_genomes_project 4 158834340 158841018 - MGP_WSBEiJ_P0068756 Plekhn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065702.1 MGP_WSBEiJ_G0027771.1 mouse_genomes_project 4 108475112 108490675 + MGP_WSBEiJ_P0065702 Cc2d1b protein_coding protein_coding MGP_WSBEiJ_T0065703.1 MGP_WSBEiJ_G0027771.1 mouse_genomes_project 4 108478679 108481174 + MGP_WSBEiJ_P0065703 Cc2d1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065704.1 MGP_WSBEiJ_G0027771.1 mouse_genomes_project 4 108480922 108481930 + Cc2d1b protein_coding retained_intron MGP_WSBEiJ_T0065705.1 MGP_WSBEiJ_G0027771.1 mouse_genomes_project 4 108481187 108482271 + Cc2d1b protein_coding retained_intron MGP_WSBEiJ_T0065706.1 MGP_WSBEiJ_G0027771.1 mouse_genomes_project 4 108481215 108489285 + Cc2d1b protein_coding retained_intron MGP_WSBEiJ_T0065707.1 MGP_WSBEiJ_G0027771.1 mouse_genomes_project 4 108484757 108485570 + Cc2d1b protein_coding retained_intron MGP_WSBEiJ_T0065708.1 MGP_WSBEiJ_G0027771.1 mouse_genomes_project 4 108484791 108485601 + Cc2d1b protein_coding processed_transcript MGP_WSBEiJ_T0065709.1 MGP_WSBEiJ_G0027771.1 mouse_genomes_project 4 108485617 108488443 + Cc2d1b protein_coding retained_intron MGP_WSBEiJ_T0007859.1 MGP_WSBEiJ_G0006421.1 mouse_genomes_project 4 132773944 132774728 + Gm13063 lincRNA lincRNA MGP_WSBEiJ_T0063690.1 MGP_WSBEiJ_G0027309.1 mouse_genomes_project 4 15723363 15992880 - MGP_WSBEiJ_P0063690 Cnbd1 protein_coding protein_coding MGP_WSBEiJ_T0014221.1 MGP_WSBEiJ_G0012351.1 mouse_genomes_project 4 84323399 84323711 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068248.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153152124 153171985 + MGP_WSBEiJ_P0068248 Tnfrsf9 protein_coding protein_coding MGP_WSBEiJ_T0068250.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153157750 153184396 + MGP_WSBEiJ_P0068250 Tnfrsf9 protein_coding protein_coding MGP_WSBEiJ_T0068251.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153157785 153184396 + MGP_WSBEiJ_P0068251 Tnfrsf9 protein_coding protein_coding MGP_WSBEiJ_T0068252.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153162885 153183543 + MGP_WSBEiJ_P0068252 Tnfrsf9 protein_coding protein_coding MGP_WSBEiJ_T0068253.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153165493 153171976 + MGP_WSBEiJ_P0068253 Tnfrsf9 protein_coding protein_coding MGP_WSBEiJ_T0068254.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153165574 153167523 + Tnfrsf9 protein_coding processed_transcript MGP_WSBEiJ_T0068255.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153165574 153184396 + MGP_WSBEiJ_P0068255 Tnfrsf9 protein_coding protein_coding MGP_WSBEiJ_T0068256.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153167250 153183388 + MGP_WSBEiJ_P0068256 Tnfrsf9 protein_coding protein_coding MGP_WSBEiJ_T0068257.1 MGP_WSBEiJ_G0028353.1 mouse_genomes_project 4 153167371 153173130 + MGP_WSBEiJ_P0068257 Tnfrsf9 protein_coding protein_coding MGP_WSBEiJ_T0004522.1 MGP_WSBEiJ_G0003921.1 mouse_genomes_project 4 152063410 152067554 + Gm13070 antisense antisense MGP_WSBEiJ_T0067275.1 MGP_WSBEiJ_G0028119.1 mouse_genomes_project 4 135022925 135040730 - Cd52 protein_coding processed_transcript MGP_WSBEiJ_T0067278.1 MGP_WSBEiJ_G0028119.1 mouse_genomes_project 4 135039224 135040771 - MGP_WSBEiJ_P0067278 Cd52 protein_coding protein_coding MGP_WSBEiJ_T0067279.1 MGP_WSBEiJ_G0028119.1 mouse_genomes_project 4 135039764 135040727 - Cd52 protein_coding processed_transcript MGP_WSBEiJ_T0065463.1 MGP_WSBEiJ_G0027725.1 mouse_genomes_project 4 104588537 104695468 + MGP_WSBEiJ_P0065463 1700024P16Rik protein_coding protein_coding MGP_WSBEiJ_T0065464.1 MGP_WSBEiJ_G0027725.1 mouse_genomes_project 4 104588605 104695468 + MGP_WSBEiJ_P0065464 1700024P16Rik protein_coding protein_coding MGP_WSBEiJ_T0014011.1 MGP_WSBEiJ_G0012141.1 mouse_genomes_project 4 7821851 7822412 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099537.1 MGP_WSBEiJ_G0038200.1 mouse_genomes_project 4 74052612 74052742 - Gm22864 snoRNA snoRNA MGP_WSBEiJ_T0007880.1 MGP_WSBEiJ_G0006438.1 mouse_genomes_project 4 141387382 141406242 - 4933427I22Rik lincRNA lincRNA MGP_WSBEiJ_T0007881.1 MGP_WSBEiJ_G0006438.1 mouse_genomes_project 4 141387954 141396120 - 4933427I22Rik lincRNA lincRNA MGP_WSBEiJ_T0007751.1 MGP_WSBEiJ_G0006341.1 mouse_genomes_project 4 66984588 66993828 - Gm12911 lincRNA lincRNA MGP_WSBEiJ_T0068563.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 157970748 157980131 + protein_coding retained_intron MGP_WSBEiJ_T0068564.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 157970816 158010398 + protein_coding processed_transcript MGP_WSBEiJ_T0068565.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 157970816 157986054 + MGP_WSBEiJ_P0068565 protein_coding protein_coding MGP_WSBEiJ_T0068566.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 157970816 158038155 + MGP_WSBEiJ_P0068566 protein_coding protein_coding MGP_WSBEiJ_T0068567.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 157970845 158038164 + MGP_WSBEiJ_P0068567 protein_coding protein_coding MGP_WSBEiJ_T0068568.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 157986054 158018694 + protein_coding retained_intron MGP_WSBEiJ_T0068569.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 157993887 158018527 + protein_coding processed_transcript MGP_WSBEiJ_T0068570.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 158021801 158037737 + protein_coding retained_intron MGP_WSBEiJ_T0068571.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 158033221 158037862 + protein_coding retained_intron MGP_WSBEiJ_T0068572.1 MGP_WSBEiJ_G0028408.1 mouse_genomes_project 4 158033268 158037812 + protein_coding retained_intron MGP_WSBEiJ_T0065475.1 MGP_WSBEiJ_G0027731.1 mouse_genomes_project 4 106173806 106196055 - MGP_WSBEiJ_P0065475 Pcsk9 protein_coding protein_coding MGP_WSBEiJ_T0067684.1 MGP_WSBEiJ_G0028212.1 mouse_genomes_project 4 140233435 140236387 - MGP_WSBEiJ_P0067684 Gm13030 protein_coding protein_coding MGP_WSBEiJ_T0067748.1 MGP_WSBEiJ_G0028230.1 mouse_genomes_project 4 141173857 141280649 - MGP_WSBEiJ_P0067748 Pax7 protein_coding protein_coding MGP_WSBEiJ_T0067749.1 MGP_WSBEiJ_G0028230.1 mouse_genomes_project 4 141177465 141280136 - MGP_WSBEiJ_P0067749 Pax7 protein_coding protein_coding MGP_WSBEiJ_T0014361.1 MGP_WSBEiJ_G0012491.1 mouse_genomes_project 4 134793028 134793211 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004530.1 MGP_WSBEiJ_G0003929.1 mouse_genomes_project 4 157109975 157112982 + Gm13134 antisense antisense MGP_WSBEiJ_T0004531.1 MGP_WSBEiJ_G0003929.1 mouse_genomes_project 4 157110093 157111483 + Gm13134 antisense antisense MGP_WSBEiJ_T0010416.1 MGP_WSBEiJ_G0008573.1 mouse_genomes_project 4 38462280 38462344 + Mir3094 miRNA miRNA MGP_WSBEiJ_T0014114.1 MGP_WSBEiJ_G0012244.1 mouse_genomes_project 4 42089067 42089484 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065240.1 MGP_WSBEiJ_G0027676.1 mouse_genomes_project 4 95870720 95905671 - MGP_WSBEiJ_P0065240 Cyp2j6 protein_coding protein_coding MGP_WSBEiJ_T0007770.1 MGP_WSBEiJ_G0006357.1 mouse_genomes_project 4 90974363 90979190 + Gm12670 lincRNA lincRNA MGP_WSBEiJ_T0066461.1 MGP_WSBEiJ_G0027941.1 mouse_genomes_project 4 123350426 123374871 + MGP_WSBEiJ_P0066461 Bmp8b protein_coding protein_coding MGP_WSBEiJ_T0066463.1 MGP_WSBEiJ_G0027941.1 mouse_genomes_project 4 123367854 123380805 + Bmp8b protein_coding processed_transcript MGP_WSBEiJ_T0065246.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 96936432 96953993 - E130114P18Rik protein_coding processed_transcript MGP_WSBEiJ_T0065247.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 96936432 96953969 - E130114P18Rik protein_coding processed_transcript MGP_WSBEiJ_T0065248.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 96936432 96954009 - E130114P18Rik protein_coding processed_transcript MGP_WSBEiJ_T0065249.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 96936432 96953980 - MGP_WSBEiJ_P0065249 E130114P18Rik protein_coding protein_coding MGP_WSBEiJ_T0065250.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 96936432 97155627 - MGP_WSBEiJ_P0065250 E130114P18Rik protein_coding protein_coding MGP_WSBEiJ_T0065251.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 96936432 96954002 - MGP_WSBEiJ_P0065251 E130114P18Rik protein_coding protein_coding MGP_WSBEiJ_T0065252.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 96937485 97062443 - MGP_WSBEiJ_P0065252 E130114P18Rik protein_coding protein_coding MGP_WSBEiJ_T0065253.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 96943997 96953985 - E130114P18Rik protein_coding processed_transcript MGP_WSBEiJ_T0065254.1 MGP_WSBEiJ_G0027681.1 mouse_genomes_project 4 97050957 97155657 - E130114P18Rik protein_coding processed_transcript MGP_WSBEiJ_T0007878.1 MGP_WSBEiJ_G0006436.1 mouse_genomes_project 4 141368174 141369617 + Gm1667 lincRNA lincRNA MGP_WSBEiJ_T0014123.1 MGP_WSBEiJ_G0012253.1 mouse_genomes_project 4 46725090 46725426 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014195.1 MGP_WSBEiJ_G0012325.1 mouse_genomes_project 4 74624798 74625628 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007721.1 MGP_WSBEiJ_G0006317.1 mouse_genomes_project 4 46881478 46947358 + lincRNA lincRNA MGP_WSBEiJ_T0004493.1 MGP_WSBEiJ_G0003901.1 mouse_genomes_project 4 143203987 143205562 + AI507597 antisense antisense MGP_WSBEiJ_T0004494.1 MGP_WSBEiJ_G0003901.1 mouse_genomes_project 4 143204315 143205562 + AI507597 antisense antisense MGP_WSBEiJ_T0007895.1 MGP_WSBEiJ_G0006452.1 mouse_genomes_project 4 151928478 151935856 + Gm16188 lincRNA lincRNA MGP_WSBEiJ_T0014373.1 MGP_WSBEiJ_G0012503.1 mouse_genomes_project 4 137168587 137169047 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063850.1 MGP_WSBEiJ_G0027349.1 mouse_genomes_project 4 30365461 30381443 - MGP_WSBEiJ_P0063850 Pm20d2 protein_coding protein_coding MGP_WSBEiJ_T0063851.1 MGP_WSBEiJ_G0027349.1 mouse_genomes_project 4 30372781 30381740 - MGP_WSBEiJ_P0063851 Pm20d2 protein_coding protein_coding MGP_WSBEiJ_T0066213.1 MGP_WSBEiJ_G0027873.1 mouse_genomes_project 4 118173685 118264361 - MGP_WSBEiJ_P0066213 Ptprf protein_coding protein_coding MGP_WSBEiJ_T0066214.1 MGP_WSBEiJ_G0027873.1 mouse_genomes_project 4 118174461 118183148 - Ptprf protein_coding processed_transcript MGP_WSBEiJ_T0066215.1 MGP_WSBEiJ_G0027873.1 mouse_genomes_project 4 118174477 118201883 - MGP_WSBEiJ_P0066215 Ptprf protein_coding protein_coding MGP_WSBEiJ_T0066216.1 MGP_WSBEiJ_G0027873.1 mouse_genomes_project 4 118174482 118201454 - MGP_WSBEiJ_P0066216 Ptprf protein_coding protein_coding MGP_WSBEiJ_T0066217.1 MGP_WSBEiJ_G0027873.1 mouse_genomes_project 4 118175332 118176214 - Ptprf protein_coding processed_transcript MGP_WSBEiJ_T0066218.1 MGP_WSBEiJ_G0027873.1 mouse_genomes_project 4 118191582 118196540 - Ptprf protein_coding processed_transcript MGP_WSBEiJ_T0068711.1 MGP_WSBEiJ_G0028434.1 mouse_genomes_project 4 158555563 158559851 + MGP_WSBEiJ_P0068711 Fam132a protein_coding protein_coding MGP_WSBEiJ_T0068712.1 MGP_WSBEiJ_G0028434.1 mouse_genomes_project 4 158557795 158558416 + Fam132a protein_coding processed_transcript MGP_WSBEiJ_T0068713.1 MGP_WSBEiJ_G0028434.1 mouse_genomes_project 4 158558330 158559843 + Fam132a protein_coding processed_transcript MGP_WSBEiJ_T0066817.1 MGP_WSBEiJ_G0028028.1 mouse_genomes_project 4 129970494 130000685 - MGP_WSBEiJ_P0066817 Rbbp4 protein_coding protein_coding MGP_WSBEiJ_T0066818.1 MGP_WSBEiJ_G0028028.1 mouse_genomes_project 4 129972912 129999959 - Rbbp4 protein_coding processed_transcript MGP_WSBEiJ_T0066819.1 MGP_WSBEiJ_G0028028.1 mouse_genomes_project 4 129990065 130000564 - Rbbp4 protein_coding retained_intron MGP_WSBEiJ_T0066820.1 MGP_WSBEiJ_G0028028.1 mouse_genomes_project 4 129993895 130000398 - MGP_WSBEiJ_P0066820 Rbbp4 protein_coding protein_coding MGP_WSBEiJ_T0011363.1 MGP_WSBEiJ_G0009520.1 mouse_genomes_project 4 43947054 43947321 + Gm23250 misc_RNA misc_RNA MGP_WSBEiJ_T0014206.1 MGP_WSBEiJ_G0012336.1 mouse_genomes_project 4 78949901 78951029 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004462.1 MGP_WSBEiJ_G0003876.1 mouse_genomes_project 4 130173684 130193836 - Gm12979 antisense antisense MGP_WSBEiJ_T0066750.1 MGP_WSBEiJ_G0028015.1 mouse_genomes_project 4 129367275 129380561 + MGP_WSBEiJ_P0066750 A3galt2 protein_coding protein_coding MGP_WSBEiJ_T0066751.1 MGP_WSBEiJ_G0028015.1 mouse_genomes_project 4 129371169 129381271 + MGP_WSBEiJ_P0066751 A3galt2 protein_coding protein_coding MGP_WSBEiJ_T0007716.1 MGP_WSBEiJ_G0006313.1 mouse_genomes_project 4 43487077 43497928 + Gm829 lincRNA lincRNA MGP_WSBEiJ_T0007717.1 MGP_WSBEiJ_G0006313.1 mouse_genomes_project 4 43487077 43532014 + Gm829 lincRNA lincRNA MGP_WSBEiJ_T0014295.1 MGP_WSBEiJ_G0012425.1 mouse_genomes_project 4 111261292 111262340 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064119.1 MGP_WSBEiJ_G0027416.1 mouse_genomes_project 4 40663287 40670723 - MGP_WSBEiJ_P0064119 Pigo protein_coding protein_coding MGP_WSBEiJ_T0064120.1 MGP_WSBEiJ_G0027416.1 mouse_genomes_project 4 40663287 40671462 - MGP_WSBEiJ_P0064120 Pigo protein_coding protein_coding MGP_WSBEiJ_T0064121.1 MGP_WSBEiJ_G0027416.1 mouse_genomes_project 4 40663287 40671399 - MGP_WSBEiJ_P0064121 Pigo protein_coding protein_coding MGP_WSBEiJ_T0064122.1 MGP_WSBEiJ_G0027416.1 mouse_genomes_project 4 40663559 40665359 - Pigo protein_coding processed_transcript MGP_WSBEiJ_T0064123.1 MGP_WSBEiJ_G0027416.1 mouse_genomes_project 4 40670345 40671110 - Pigo protein_coding processed_transcript MGP_WSBEiJ_T0007747.1 MGP_WSBEiJ_G0006337.1 mouse_genomes_project 4 62192501 62199146 + Gm11482 lincRNA lincRNA MGP_WSBEiJ_T0067750.1 MGP_WSBEiJ_G0028231.1 mouse_genomes_project 4 141417003 141425490 - MGP_WSBEiJ_P0067750 Klhdc7a protein_coding protein_coding MGP_WSBEiJ_T0099525.1 MGP_WSBEiJ_G0038188.1 mouse_genomes_project 4 55006541 55006661 - Gm22952 snoRNA snoRNA MGP_WSBEiJ_T0068587.1 MGP_WSBEiJ_G0028411.1 mouse_genomes_project 4 158141368 158174251 + MGP_WSBEiJ_P0068587 Nadk protein_coding protein_coding MGP_WSBEiJ_T0068588.1 MGP_WSBEiJ_G0028411.1 mouse_genomes_project 4 158142679 158174255 + MGP_WSBEiJ_P0068588 Nadk protein_coding protein_coding MGP_WSBEiJ_T0068589.1 MGP_WSBEiJ_G0028411.1 mouse_genomes_project 4 158142805 158158901 + Nadk protein_coding processed_transcript MGP_WSBEiJ_T0068590.1 MGP_WSBEiJ_G0028411.1 mouse_genomes_project 4 158142821 158158895 + MGP_WSBEiJ_P0068590 Nadk protein_coding protein_coding MGP_WSBEiJ_T0068591.1 MGP_WSBEiJ_G0028411.1 mouse_genomes_project 4 158142887 158161191 + MGP_WSBEiJ_P0068591 Nadk protein_coding protein_coding MGP_WSBEiJ_T0068592.1 MGP_WSBEiJ_G0028411.1 mouse_genomes_project 4 158143051 158161145 + MGP_WSBEiJ_P0068592 Nadk protein_coding protein_coding MGP_WSBEiJ_T0068593.1 MGP_WSBEiJ_G0028411.1 mouse_genomes_project 4 158165748 158174255 + MGP_WSBEiJ_P0068593 Nadk protein_coding protein_coding MGP_WSBEiJ_T0068594.1 MGP_WSBEiJ_G0028411.1 mouse_genomes_project 4 158170030 158172874 + Nadk protein_coding processed_transcript MGP_WSBEiJ_T0066285.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119211990 119227830 - MGP_WSBEiJ_P0066285 Ermap protein_coding protein_coding MGP_WSBEiJ_T0066286.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119212124 119227795 - MGP_WSBEiJ_P0066286 Ermap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066287.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119214083 119227795 - Ermap protein_coding retained_intron MGP_WSBEiJ_T0066288.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119215091 119227775 - Ermap protein_coding processed_transcript MGP_WSBEiJ_T0066289.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119222225 119226177 - MGP_WSBEiJ_P0066289 Ermap protein_coding protein_coding MGP_WSBEiJ_T0066290.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119222286 119227770 - MGP_WSBEiJ_P0066290 Ermap protein_coding protein_coding MGP_WSBEiJ_T0066291.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119224624 119227815 - MGP_WSBEiJ_P0066291 Ermap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066292.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119224757 119227812 - MGP_WSBEiJ_P0066292 Ermap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066293.1 MGP_WSBEiJ_G0027898.1 mouse_genomes_project 4 119224765 119227830 - MGP_WSBEiJ_P0066293 Ermap protein_coding protein_coding MGP_WSBEiJ_T0066010.1 MGP_WSBEiJ_G0027836.1 mouse_genomes_project 4 116420224 116459596 + MGP_WSBEiJ_P0066010 Gpbp1l1 protein_coding protein_coding MGP_WSBEiJ_T0066011.1 MGP_WSBEiJ_G0027836.1 mouse_genomes_project 4 116420645 116458184 + MGP_WSBEiJ_P0066011 Gpbp1l1 protein_coding protein_coding MGP_WSBEiJ_T0066012.1 MGP_WSBEiJ_G0027836.1 mouse_genomes_project 4 116443146 116445791 + Gpbp1l1 protein_coding processed_transcript MGP_WSBEiJ_T0066013.1 MGP_WSBEiJ_G0027836.1 mouse_genomes_project 4 116445701 116453957 + Gpbp1l1 protein_coding processed_transcript MGP_WSBEiJ_T0067891.1 MGP_WSBEiJ_G0028262.1 mouse_genomes_project 4 143267599 143313522 - MGP_WSBEiJ_P0067891 protein_coding protein_coding MGP_WSBEiJ_T0067892.1 MGP_WSBEiJ_G0028262.1 mouse_genomes_project 4 143273639 143313522 - MGP_WSBEiJ_P0067892 protein_coding protein_coding MGP_WSBEiJ_T0004486.1 MGP_WSBEiJ_G0003895.1 mouse_genomes_project 4 141606112 141607554 + Gm13027 antisense antisense MGP_WSBEiJ_T0010418.1 MGP_WSBEiJ_G0008575.1 mouse_genomes_project 4 41916119 41916192 - Mir5106 miRNA miRNA MGP_WSBEiJ_T0014191.1 MGP_WSBEiJ_G0012321.1 mouse_genomes_project 4 73890187 73890502 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066257.1 MGP_WSBEiJ_G0027883.1 mouse_genomes_project 4 118621700 118628681 + MGP_WSBEiJ_P0066257 Ebna1bp2 protein_coding protein_coding MGP_WSBEiJ_T0066258.1 MGP_WSBEiJ_G0027883.1 mouse_genomes_project 4 118621749 118622833 + Ebna1bp2 protein_coding processed_transcript MGP_WSBEiJ_T0066259.1 MGP_WSBEiJ_G0027883.1 mouse_genomes_project 4 118621751 118622564 + Ebna1bp2 protein_coding processed_transcript MGP_WSBEiJ_T0066260.1 MGP_WSBEiJ_G0027883.1 mouse_genomes_project 4 118622061 118625096 + MGP_WSBEiJ_P0066260 Ebna1bp2 protein_coding protein_coding MGP_WSBEiJ_T0066261.1 MGP_WSBEiJ_G0027883.1 mouse_genomes_project 4 118622127 118626522 + Ebna1bp2 protein_coding processed_transcript MGP_WSBEiJ_T0066147.1 MGP_WSBEiJ_G0027861.1 mouse_genomes_project 4 117629523 117637097 - Dmap1 protein_coding processed_transcript MGP_WSBEiJ_T0066148.1 MGP_WSBEiJ_G0027861.1 mouse_genomes_project 4 117629523 117637117 - MGP_WSBEiJ_P0066148 Dmap1 protein_coding protein_coding MGP_WSBEiJ_T0066149.1 MGP_WSBEiJ_G0027861.1 mouse_genomes_project 4 117629528 117636827 - Dmap1 protein_coding processed_transcript MGP_WSBEiJ_T0066150.1 MGP_WSBEiJ_G0027861.1 mouse_genomes_project 4 117635763 117637065 - Dmap1 protein_coding processed_transcript MGP_WSBEiJ_T0066151.1 MGP_WSBEiJ_G0027861.1 mouse_genomes_project 4 117636145 117637055 - Dmap1 protein_coding processed_transcript MGP_WSBEiJ_T0066152.1 MGP_WSBEiJ_G0027861.1 mouse_genomes_project 4 117636430 117637115 - Dmap1 protein_coding processed_transcript MGP_WSBEiJ_T0004379.1 MGP_WSBEiJ_G0003814.1 mouse_genomes_project 4 51379855 51384783 + 4930522O17Rik antisense antisense MGP_WSBEiJ_T0013995.1 MGP_WSBEiJ_G0012125.1 mouse_genomes_project 4 2486169 2487141 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017441.1 MGP_WSBEiJ_G0014957.1 mouse_genomes_project 4 15256906 15755640 + processed_transcript processed_transcript MGP_WSBEiJ_T0065891.1 MGP_WSBEiJ_G0027809.1 mouse_genomes_project 4 115017102 115193879 + MGP_WSBEiJ_P0065891 Cyp4a12a protein_coding protein_coding MGP_WSBEiJ_T0066944.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130794260 130853355 + MGP_WSBEiJ_P0066944 Col16a1 protein_coding protein_coding MGP_WSBEiJ_T0066945.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130794295 130796135 + MGP_WSBEiJ_P0066945 Col16a1 protein_coding protein_coding MGP_WSBEiJ_T0066946.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130794305 130845478 + Col16a1 protein_coding processed_transcript MGP_WSBEiJ_T0066947.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130794329 130830364 + Col16a1 protein_coding processed_transcript MGP_WSBEiJ_T0066948.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130794365 130798264 + MGP_WSBEiJ_P0066948 Col16a1 protein_coding protein_coding MGP_WSBEiJ_T0066949.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130794382 130853361 + MGP_WSBEiJ_P0066949 Col16a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066950.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130801402 130804970 + MGP_WSBEiJ_P0066950 Col16a1 protein_coding protein_coding MGP_WSBEiJ_T0066951.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130801447 130802416 + Col16a1 protein_coding retained_intron MGP_WSBEiJ_T0066952.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130802378 130853355 + MGP_WSBEiJ_P0066952 Col16a1 protein_coding protein_coding MGP_WSBEiJ_T0066953.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130815736 130831462 + Col16a1 protein_coding processed_transcript MGP_WSBEiJ_T0066954.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130827084 130830171 + Col16a1 protein_coding processed_transcript MGP_WSBEiJ_T0066955.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130828983 130830583 + Col16a1 protein_coding processed_transcript MGP_WSBEiJ_T0066956.1 MGP_WSBEiJ_G0028051.1 mouse_genomes_project 4 130851671 130853354 + Col16a1 protein_coding processed_transcript MGP_WSBEiJ_T0065649.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107862369 107941165 - MGP_WSBEiJ_P0065649 Scp2 protein_coding protein_coding MGP_WSBEiJ_T0065650.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107862798 107867539 - Scp2 protein_coding processed_transcript MGP_WSBEiJ_T0065651.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107862908 107890875 - Scp2 protein_coding processed_transcript MGP_WSBEiJ_T0065652.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107863080 107890931 - MGP_WSBEiJ_P0065652 Scp2 protein_coding protein_coding MGP_WSBEiJ_T0065653.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107863368 107941109 - Scp2 protein_coding processed_transcript MGP_WSBEiJ_T0065654.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107907304 107941137 - MGP_WSBEiJ_P0065654 Scp2 protein_coding protein_coding MGP_WSBEiJ_T0065655.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107911274 107941028 - Scp2 protein_coding processed_transcript MGP_WSBEiJ_T0065656.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107911583 107970811 - Scp2 protein_coding processed_transcript MGP_WSBEiJ_T0065657.1 MGP_WSBEiJ_G0027761.1 mouse_genomes_project 4 107923510 107970815 - MGP_WSBEiJ_P0065657 Scp2 protein_coding protein_coding MGP_WSBEiJ_T0098253.1 MGP_WSBEiJ_G0036916.1 mouse_genomes_project 4 47275996 47276102 + Gm22685 snRNA snRNA MGP_WSBEiJ_T0004441.1 MGP_WSBEiJ_G0003859.1 mouse_genomes_project 4 118983717 118984363 - Gm12863 antisense antisense MGP_WSBEiJ_T0004458.1 MGP_WSBEiJ_G0003873.1 mouse_genomes_project 4 128715016 128750581 - Csmd2os antisense antisense MGP_WSBEiJ_T0004459.1 MGP_WSBEiJ_G0003873.1 mouse_genomes_project 4 128715016 128745706 - Csmd2os antisense antisense MGP_WSBEiJ_T0067934.1 MGP_WSBEiJ_G0028274.1 mouse_genomes_project 4 144961537 145019002 - MGP_WSBEiJ_P0067934 Pdpn protein_coding protein_coding MGP_WSBEiJ_T0067935.1 MGP_WSBEiJ_G0028274.1 mouse_genomes_project 4 144962451 145018901 - MGP_WSBEiJ_P0067935 Pdpn protein_coding protein_coding MGP_WSBEiJ_T0014381.1 MGP_WSBEiJ_G0012511.1 mouse_genomes_project 4 142923897 142924101 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011374.1 MGP_WSBEiJ_G0009531.1 mouse_genomes_project 4 93784800 93785061 - Gm26410 misc_RNA misc_RNA MGP_WSBEiJ_T0063781.1 MGP_WSBEiJ_G0027334.1 mouse_genomes_project 4 22107931 22143475 - MGP_WSBEiJ_P0063781 Ufl1 protein_coding protein_coding MGP_WSBEiJ_T0063782.1 MGP_WSBEiJ_G0027334.1 mouse_genomes_project 4 22110113 22143483 - Ufl1 protein_coding retained_intron MGP_WSBEiJ_T0063783.1 MGP_WSBEiJ_G0027334.1 mouse_genomes_project 4 22130847 22143471 - Ufl1 protein_coding processed_transcript MGP_WSBEiJ_T0064932.1 MGP_WSBEiJ_G0027603.1 mouse_genomes_project 4 74049349 74050301 - MGP_WSBEiJ_P0064932 Tmem261 protein_coding protein_coding MGP_WSBEiJ_T0065633.1 MGP_WSBEiJ_G0027758.1 mouse_genomes_project 4 107707312 107728827 - MGP_WSBEiJ_P0065633 Cpt2 protein_coding protein_coding MGP_WSBEiJ_T0065634.1 MGP_WSBEiJ_G0027758.1 mouse_genomes_project 4 107707314 107728777 - MGP_WSBEiJ_P0065634 Cpt2 protein_coding protein_coding MGP_WSBEiJ_T0065635.1 MGP_WSBEiJ_G0027758.1 mouse_genomes_project 4 107711901 107728762 - MGP_WSBEiJ_P0065635 Cpt2 protein_coding protein_coding MGP_WSBEiJ_T0065636.1 MGP_WSBEiJ_G0027758.1 mouse_genomes_project 4 107711988 107717994 - Cpt2 protein_coding retained_intron MGP_WSBEiJ_T0065637.1 MGP_WSBEiJ_G0027758.1 mouse_genomes_project 4 107712135 107728664 - Cpt2 protein_coding processed_transcript MGP_WSBEiJ_T0065638.1 MGP_WSBEiJ_G0027758.1 mouse_genomes_project 4 107712490 107728805 - MGP_WSBEiJ_P0065638 Cpt2 protein_coding protein_coding MGP_WSBEiJ_T0064680.1 MGP_WSBEiJ_G0027535.1 mouse_genomes_project 4 55858178 56215096 + MGP_WSBEiJ_P0064680 Akap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064682.1 MGP_WSBEiJ_G0027535.1 mouse_genomes_project 4 55858330 56166659 + MGP_WSBEiJ_P0064682 Akap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064688.1 MGP_WSBEiJ_G0027535.1 mouse_genomes_project 4 56156524 56215098 + MGP_WSBEiJ_P0064688 Akap2 protein_coding protein_coding MGP_WSBEiJ_T0099521.1 MGP_WSBEiJ_G0038184.1 mouse_genomes_project 4 52165762 52165893 + Gm24177 snoRNA snoRNA MGP_WSBEiJ_T0099568.1 MGP_WSBEiJ_G0038231.1 mouse_genomes_project 4 133074026 133074163 + Snora16a snoRNA snoRNA MGP_WSBEiJ_T0099511.1 MGP_WSBEiJ_G0038174.1 mouse_genomes_project 4 38725191 38725272 - Gm24837 snoRNA snoRNA MGP_WSBEiJ_T0066579.1 MGP_WSBEiJ_G0027974.1 mouse_genomes_project 4 125496431 125505851 - MGP_WSBEiJ_P0066579 Zc3h12a protein_coding protein_coding MGP_WSBEiJ_T0066580.1 MGP_WSBEiJ_G0027974.1 mouse_genomes_project 4 125498101 125500529 - Zc3h12a protein_coding retained_intron MGP_WSBEiJ_T0066269.1 MGP_WSBEiJ_G0027891.1 mouse_genomes_project 4 118873652 118879378 + MGP_WSBEiJ_P0066269 protein_coding protein_coding MGP_WSBEiJ_T0066271.1 MGP_WSBEiJ_G0027891.1 mouse_genomes_project 4 118877736 118879378 + MGP_WSBEiJ_P0066271 protein_coding protein_coding MGP_WSBEiJ_T0065394.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102346051 102476239 + Sgip1 protein_coding retained_intron MGP_WSBEiJ_T0065395.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362031 102573260 + MGP_WSBEiJ_P0065395 Sgip1 protein_coding protein_coding MGP_WSBEiJ_T0065396.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362224 102469126 + Sgip1 protein_coding processed_transcript MGP_WSBEiJ_T0065397.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362241 102573141 + MGP_WSBEiJ_P0065397 Sgip1 protein_coding protein_coding MGP_WSBEiJ_T0065398.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362248 102475229 + MGP_WSBEiJ_P0065398 Sgip1 protein_coding protein_coding MGP_WSBEiJ_T0065399.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362251 102466563 + Sgip1 protein_coding processed_transcript MGP_WSBEiJ_T0065400.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362259 102572455 + MGP_WSBEiJ_P0065400 Sgip1 protein_coding protein_coding MGP_WSBEiJ_T0065401.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362271 102475541 + Sgip1 protein_coding processed_transcript MGP_WSBEiJ_T0065402.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362361 102519281 + MGP_WSBEiJ_P0065402 Sgip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065403.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362421 102574905 + MGP_WSBEiJ_P0065403 Sgip1 protein_coding protein_coding MGP_WSBEiJ_T0065404.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102362452 102571357 + MGP_WSBEiJ_P0065404 Sgip1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065405.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102475976 102571881 + MGP_WSBEiJ_P0065405 Sgip1 protein_coding protein_coding MGP_WSBEiJ_T0065406.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102521448 102528900 + Sgip1 protein_coding processed_transcript MGP_WSBEiJ_T0065407.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102527349 102529073 + Sgip1 protein_coding processed_transcript MGP_WSBEiJ_T0065408.1 MGP_WSBEiJ_G0027713.1 mouse_genomes_project 4 102562487 102568046 + Sgip1 protein_coding processed_transcript MGP_WSBEiJ_T0014249.1 MGP_WSBEiJ_G0012379.1 mouse_genomes_project 4 96921182 96921849 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064842.1 MGP_WSBEiJ_G0027578.1 mouse_genomes_project 4 61723437 61804968 + Col27a1 protein_coding retained_intron MGP_WSBEiJ_T0064843.1 MGP_WSBEiJ_G0027578.1 mouse_genomes_project 4 61724845 61787193 + Col27a1 protein_coding retained_intron MGP_WSBEiJ_T0064844.1 MGP_WSBEiJ_G0027578.1 mouse_genomes_project 4 61724868 61848432 + MGP_WSBEiJ_P0064844 Col27a1 protein_coding protein_coding MGP_WSBEiJ_T0064845.1 MGP_WSBEiJ_G0027578.1 mouse_genomes_project 4 61725259 61848431 + MGP_WSBEiJ_P0064845 Col27a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0064846.1 MGP_WSBEiJ_G0027578.1 mouse_genomes_project 4 61743715 61847154 + MGP_WSBEiJ_P0064846 Col27a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064847.1 MGP_WSBEiJ_G0027578.1 mouse_genomes_project 4 61794839 61847161 + MGP_WSBEiJ_P0064847 Col27a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064848.1 MGP_WSBEiJ_G0027578.1 mouse_genomes_project 4 61795685 61847190 + Col27a1 protein_coding retained_intron MGP_WSBEiJ_T0064849.1 MGP_WSBEiJ_G0027578.1 mouse_genomes_project 4 61842940 61847579 + Col27a1 protein_coding processed_transcript MGP_WSBEiJ_T0068402.1 MGP_WSBEiJ_G0028379.1 mouse_genomes_project 4 155797319 155909229 - MGP_WSBEiJ_P0068402 Ajap1 protein_coding protein_coding MGP_WSBEiJ_T0068403.1 MGP_WSBEiJ_G0028379.1 mouse_genomes_project 4 155798329 155908597 - MGP_WSBEiJ_P0068403 Ajap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065476.1 MGP_WSBEiJ_G0027732.1 mouse_genomes_project 4 106216014 106224851 - MGP_WSBEiJ_P0065476 Bsnd protein_coding protein_coding MGP_WSBEiJ_T0098238.1 MGP_WSBEiJ_G0036901.1 mouse_genomes_project 4 22813306 22813412 + Gm24965 snRNA snRNA MGP_WSBEiJ_T0004359.1 MGP_WSBEiJ_G0003797.1 mouse_genomes_project 4 32251553 32256299 + Gm12364 antisense antisense MGP_WSBEiJ_T0098286.1 MGP_WSBEiJ_G0036949.1 mouse_genomes_project 4 117114420 117114536 + Gm25099 snRNA snRNA MGP_WSBEiJ_T0010486.1 MGP_WSBEiJ_G0008643.1 mouse_genomes_project 4 158659456 158659546 - Mir200a miRNA miRNA MGP_WSBEiJ_T0014201.1 MGP_WSBEiJ_G0012331.1 mouse_genomes_project 4 75669264 75670301 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068620.1 MGP_WSBEiJ_G0028416.1 mouse_genomes_project 4 158276703 158278843 + MGP_WSBEiJ_P0068620 Fndc10 protein_coding protein_coding MGP_WSBEiJ_T0011385.1 MGP_WSBEiJ_G0009542.1 mouse_genomes_project 4 134545808 134546069 + Gm22662 misc_RNA misc_RNA MGP_WSBEiJ_T0004514.1 MGP_WSBEiJ_G0003915.1 mouse_genomes_project 4 151458188 151459451 + Ube4bos3 antisense antisense MGP_WSBEiJ_T0068274.1 MGP_WSBEiJ_G0028358.1 mouse_genomes_project 4 153330487 153332361 + MGP_WSBEiJ_P0068274 Gm13090 protein_coding protein_coding MGP_WSBEiJ_T0067526.1 MGP_WSBEiJ_G0028175.1 mouse_genomes_project 4 137589168 137671286 + MGP_WSBEiJ_P0067526 Luzp1 protein_coding protein_coding MGP_WSBEiJ_T0067527.1 MGP_WSBEiJ_G0028175.1 mouse_genomes_project 4 137589168 137671282 + MGP_WSBEiJ_P0067527 Luzp1 protein_coding protein_coding MGP_WSBEiJ_T0067528.1 MGP_WSBEiJ_G0028175.1 mouse_genomes_project 4 137589211 137643216 + Luzp1 protein_coding retained_intron MGP_WSBEiJ_T0067529.1 MGP_WSBEiJ_G0028175.1 mouse_genomes_project 4 137589258 137662654 + MGP_WSBEiJ_P0067529 Luzp1 protein_coding protein_coding MGP_WSBEiJ_T0067530.1 MGP_WSBEiJ_G0028175.1 mouse_genomes_project 4 137642899 137668361 + MGP_WSBEiJ_P0067530 Luzp1 protein_coding protein_coding MGP_WSBEiJ_T0067531.1 MGP_WSBEiJ_G0028175.1 mouse_genomes_project 4 137662340 137671285 + MGP_WSBEiJ_P0067531 Luzp1 protein_coding protein_coding MGP_WSBEiJ_T0067532.1 MGP_WSBEiJ_G0028175.1 mouse_genomes_project 4 137667231 137676735 + MGP_WSBEiJ_P0067532 Luzp1 protein_coding protein_coding MGP_WSBEiJ_T0066233.1 MGP_WSBEiJ_G0027876.1 mouse_genomes_project 4 118415195 118419703 + MGP_WSBEiJ_P0066233 Elovl1 protein_coding protein_coding MGP_WSBEiJ_T0066234.1 MGP_WSBEiJ_G0027876.1 mouse_genomes_project 4 118415213 118415914 + Elovl1 protein_coding processed_transcript MGP_WSBEiJ_T0066235.1 MGP_WSBEiJ_G0027876.1 mouse_genomes_project 4 118415257 118419030 + Elovl1 protein_coding processed_transcript MGP_WSBEiJ_T0066236.1 MGP_WSBEiJ_G0027876.1 mouse_genomes_project 4 118415291 118418158 + Elovl1 protein_coding processed_transcript MGP_WSBEiJ_T0007851.1 MGP_WSBEiJ_G0006415.1 mouse_genomes_project 4 131413211 131414998 + Gm12972 lincRNA lincRNA MGP_WSBEiJ_T0099571.1 MGP_WSBEiJ_G0038234.1 mouse_genomes_project 4 133074801 133074931 + Snora61 snoRNA snoRNA MGP_WSBEiJ_T0014113.1 MGP_WSBEiJ_G0012243.1 mouse_genomes_project 4 42022943 42023575 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068714.1 MGP_WSBEiJ_G0028435.1 mouse_genomes_project 4 158584541 158587701 - MGP_WSBEiJ_P0068714 B3galt6 protein_coding protein_coding MGP_WSBEiJ_T0066581.1 MGP_WSBEiJ_G0027975.1 mouse_genomes_project 4 125897725 126126272 + MGP_WSBEiJ_P0066581 Grik3 protein_coding protein_coding MGP_WSBEiJ_T0067499.1 MGP_WSBEiJ_G0028167.1 mouse_genomes_project 4 137238603 137240501 + MGP_WSBEiJ_P0067499 Id3 protein_coding protein_coding MGP_WSBEiJ_T0067500.1 MGP_WSBEiJ_G0028167.1 mouse_genomes_project 4 137238969 137239825 + Id3 protein_coding retained_intron MGP_WSBEiJ_T0067501.1 MGP_WSBEiJ_G0028167.1 mouse_genomes_project 4 137240082 137240864 + Id3 protein_coding processed_transcript MGP_WSBEiJ_T0011377.1 MGP_WSBEiJ_G0009534.1 mouse_genomes_project 4 105694085 105694396 - Gm24363 misc_RNA misc_RNA MGP_WSBEiJ_T0099573.1 MGP_WSBEiJ_G0038236.1 mouse_genomes_project 4 133117857 133118062 - Snora73b snoRNA snoRNA MGP_WSBEiJ_T0067147.1 MGP_WSBEiJ_G0028091.1 mouse_genomes_project 4 133658799 133694844 - MGP_WSBEiJ_P0067147 Stx12 protein_coding protein_coding MGP_WSBEiJ_T0067148.1 MGP_WSBEiJ_G0028091.1 mouse_genomes_project 4 133662344 133673581 - Stx12 protein_coding processed_transcript MGP_WSBEiJ_T0098242.1 MGP_WSBEiJ_G0036905.1 mouse_genomes_project 4 34109436 34109543 + Gm23314 snRNA snRNA MGP_WSBEiJ_T0063996.1 MGP_WSBEiJ_G0027386.1 mouse_genomes_project 4 38643804 38706115 + MGP_WSBEiJ_P0063996 Ube2r2 protein_coding protein_coding MGP_WSBEiJ_T0063997.1 MGP_WSBEiJ_G0027386.1 mouse_genomes_project 4 38694282 38703561 + Ube2r2 protein_coding retained_intron MGP_WSBEiJ_T0063998.1 MGP_WSBEiJ_G0027386.1 mouse_genomes_project 4 38701631 38703774 + Ube2r2 protein_coding retained_intron MGP_WSBEiJ_T0099491.1 MGP_WSBEiJ_G0038154.1 mouse_genomes_project 4 188253 188380 + Gm22541 snoRNA snoRNA MGP_WSBEiJ_T0067544.1 MGP_WSBEiJ_G0028179.1 mouse_genomes_project 4 137777129 137976593 - MGP_WSBEiJ_P0067544 Ephb2 protein_coding protein_coding MGP_WSBEiJ_T0067545.1 MGP_WSBEiJ_G0028179.1 mouse_genomes_project 4 137783196 137976561 - MGP_WSBEiJ_P0067545 Ephb2 protein_coding protein_coding MGP_WSBEiJ_T0067546.1 MGP_WSBEiJ_G0028179.1 mouse_genomes_project 4 137784240 137976448 - MGP_WSBEiJ_P0067546 Ephb2 protein_coding protein_coding MGP_WSBEiJ_T0067547.1 MGP_WSBEiJ_G0028179.1 mouse_genomes_project 4 137789324 137792888 - Ephb2 protein_coding retained_intron MGP_WSBEiJ_T0067548.1 MGP_WSBEiJ_G0028179.1 mouse_genomes_project 4 137792698 137827534 - MGP_WSBEiJ_P0067548 Ephb2 protein_coding protein_coding MGP_WSBEiJ_T0067549.1 MGP_WSBEiJ_G0028179.1 mouse_genomes_project 4 137910058 137976579 - Ephb2 protein_coding retained_intron MGP_WSBEiJ_T0098307.1 MGP_WSBEiJ_G0036970.1 mouse_genomes_project 4 138490842 138490930 + Gm25772 snRNA snRNA MGP_WSBEiJ_T0014371.1 MGP_WSBEiJ_G0012501.1 mouse_genomes_project 4 136964786 136965001 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066262.1 MGP_WSBEiJ_G0027884.1 mouse_genomes_project 4 118671573 118672521 + MGP_WSBEiJ_P0066262 Olfr62 protein_coding protein_coding MGP_WSBEiJ_T0063488.1 MGP_WSBEiJ_G0027264.1 mouse_genomes_project 4 1400060 1433320 - MGP_WSBEiJ_P0063488 Impad1 protein_coding protein_coding MGP_WSBEiJ_T0066316.1 MGP_WSBEiJ_G0027904.1 mouse_genomes_project 4 119323510 119339945 - MGP_WSBEiJ_P0066316 Ybx1 protein_coding protein_coding MGP_WSBEiJ_T0066317.1 MGP_WSBEiJ_G0027904.1 mouse_genomes_project 4 119323519 119328205 - MGP_WSBEiJ_P0066317 Ybx1 protein_coding protein_coding MGP_WSBEiJ_T0066318.1 MGP_WSBEiJ_G0027904.1 mouse_genomes_project 4 119323696 119324980 - Ybx1 protein_coding processed_transcript MGP_WSBEiJ_T0066319.1 MGP_WSBEiJ_G0027904.1 mouse_genomes_project 4 119326555 119327599 - Ybx1 protein_coding processed_transcript MGP_WSBEiJ_T0066320.1 MGP_WSBEiJ_G0027904.1 mouse_genomes_project 4 119327685 119339831 - Ybx1 protein_coding processed_transcript MGP_WSBEiJ_T0066321.1 MGP_WSBEiJ_G0027904.1 mouse_genomes_project 4 119330414 119339821 - Ybx1 protein_coding processed_transcript MGP_WSBEiJ_T0066322.1 MGP_WSBEiJ_G0027904.1 mouse_genomes_project 4 119338862 119339841 - Ybx1 protein_coding processed_transcript MGP_WSBEiJ_T0063791.1 MGP_WSBEiJ_G0027337.1 mouse_genomes_project 4 25880226 26043092 + MGP_WSBEiJ_P0063791 Epha7 protein_coding protein_coding MGP_WSBEiJ_T0063792.1 MGP_WSBEiJ_G0027337.1 mouse_genomes_project 4 25880226 26022608 + MGP_WSBEiJ_P0063792 Epha7 protein_coding protein_coding MGP_WSBEiJ_T0063793.1 MGP_WSBEiJ_G0027337.1 mouse_genomes_project 4 25880247 26042409 + MGP_WSBEiJ_P0063793 Epha7 protein_coding protein_coding MGP_WSBEiJ_T0063794.1 MGP_WSBEiJ_G0027337.1 mouse_genomes_project 4 25880345 26043092 + MGP_WSBEiJ_P0063794 Epha7 protein_coding protein_coding MGP_WSBEiJ_T0063795.1 MGP_WSBEiJ_G0027337.1 mouse_genomes_project 4 25880421 25943179 + Epha7 protein_coding processed_transcript MGP_WSBEiJ_T0063796.1 MGP_WSBEiJ_G0027337.1 mouse_genomes_project 4 25882521 25888574 + Epha7 protein_coding processed_transcript MGP_WSBEiJ_T0063797.1 MGP_WSBEiJ_G0027337.1 mouse_genomes_project 4 25941231 26019057 + Epha7 protein_coding processed_transcript MGP_WSBEiJ_T0063798.1 MGP_WSBEiJ_G0027337.1 mouse_genomes_project 4 25941314 26021895 + Epha7 protein_coding processed_transcript MGP_WSBEiJ_T0063843.1 MGP_WSBEiJ_G0027346.1 mouse_genomes_project 4 30208166 30221456 + MGP_WSBEiJ_P0063843 Ube2j1 protein_coding protein_coding MGP_WSBEiJ_T0063844.1 MGP_WSBEiJ_G0027346.1 mouse_genomes_project 4 30208224 30228553 + MGP_WSBEiJ_P0063844 Ube2j1 protein_coding protein_coding MGP_WSBEiJ_T0013994.1 MGP_WSBEiJ_G0012124.1 mouse_genomes_project 4 2238781 2239253 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064886.1 MGP_WSBEiJ_G0027590.1 mouse_genomes_project 4 63742611 63986960 + MGP_WSBEiJ_P0064886 Pappa protein_coding protein_coding MGP_WSBEiJ_T0064207.1 MGP_WSBEiJ_G0027426.1 mouse_genomes_project 4 41142398 41143704 + Ccdc107 protein_coding processed_transcript MGP_WSBEiJ_T0064208.1 MGP_WSBEiJ_G0027426.1 mouse_genomes_project 4 41142860 41145420 + MGP_WSBEiJ_P0064208 Ccdc107 protein_coding protein_coding MGP_WSBEiJ_T0064209.1 MGP_WSBEiJ_G0027426.1 mouse_genomes_project 4 41142875 41143309 + Ccdc107 protein_coding processed_transcript MGP_WSBEiJ_T0064210.1 MGP_WSBEiJ_G0027426.1 mouse_genomes_project 4 41142887 41145420 + MGP_WSBEiJ_P0064210 Ccdc107 protein_coding protein_coding MGP_WSBEiJ_T0064211.1 MGP_WSBEiJ_G0027426.1 mouse_genomes_project 4 41142915 41145363 + Ccdc107 protein_coding processed_transcript MGP_WSBEiJ_T0064212.1 MGP_WSBEiJ_G0027426.1 mouse_genomes_project 4 41142915 41145370 + Ccdc107 protein_coding processed_transcript MGP_WSBEiJ_T0066736.1 MGP_WSBEiJ_G0028013.1 mouse_genomes_project 4 129214445 129217622 - MGP_WSBEiJ_P0066736 Tlr12 protein_coding protein_coding MGP_WSBEiJ_T0066737.1 MGP_WSBEiJ_G0028013.1 mouse_genomes_project 4 129216504 129217595 - Tlr12 protein_coding processed_transcript MGP_WSBEiJ_T0065348.1 MGP_WSBEiJ_G0027703.1 mouse_genomes_project 4 100679292 100801004 - MGP_WSBEiJ_P0065348 Jak1 protein_coding protein_coding MGP_WSBEiJ_T0065349.1 MGP_WSBEiJ_G0027703.1 mouse_genomes_project 4 100681163 100682034 - Jak1 protein_coding processed_transcript MGP_WSBEiJ_T0065350.1 MGP_WSBEiJ_G0027703.1 mouse_genomes_project 4 100707879 100714136 - Jak1 protein_coding processed_transcript MGP_WSBEiJ_T0065351.1 MGP_WSBEiJ_G0027703.1 mouse_genomes_project 4 100709307 100714161 - Jak1 protein_coding processed_transcript MGP_WSBEiJ_T0065352.1 MGP_WSBEiJ_G0027703.1 mouse_genomes_project 4 100710160 100801003 - Jak1 protein_coding processed_transcript MGP_WSBEiJ_T0065353.1 MGP_WSBEiJ_G0027703.1 mouse_genomes_project 4 100710200 100800945 - Jak1 protein_coding processed_transcript MGP_WSBEiJ_T0065354.1 MGP_WSBEiJ_G0027703.1 mouse_genomes_project 4 100721424 100800995 - MGP_WSBEiJ_P0065354 Jak1 protein_coding protein_coding MGP_WSBEiJ_T0065355.1 MGP_WSBEiJ_G0027703.1 mouse_genomes_project 4 100727623 100800948 - Jak1 protein_coding processed_transcript MGP_WSBEiJ_T0014026.1 MGP_WSBEiJ_G0012156.1 mouse_genomes_project 4 12803776 12805098 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068011.1 MGP_WSBEiJ_G0028308.1 mouse_genomes_project 4 150007377 150008735 + MGP_WSBEiJ_P0068011 Nppa protein_coding protein_coding MGP_WSBEiJ_T0007673.1 MGP_WSBEiJ_G0006276.1 mouse_genomes_project 4 2267954 2278558 + 4930423M02Rik lincRNA lincRNA MGP_WSBEiJ_T0007674.1 MGP_WSBEiJ_G0006276.1 mouse_genomes_project 4 2267962 2278031 + 4930423M02Rik lincRNA lincRNA MGP_WSBEiJ_T0017475.1 MGP_WSBEiJ_G0014980.1 mouse_genomes_project 4 94833737 94859411 - Gm830 processed_transcript processed_transcript MGP_WSBEiJ_T0067964.1 MGP_WSBEiJ_G0028295.1 mouse_genomes_project 4 146585025 146594376 - MGP_WSBEiJ_P0067964 Gm438 protein_coding protein_coding MGP_WSBEiJ_T0010467.1 MGP_WSBEiJ_G0008624.1 mouse_genomes_project 4 136555793 136555922 - Gm25317 miRNA miRNA MGP_WSBEiJ_T0014102.1 MGP_WSBEiJ_G0012232.1 mouse_genomes_project 4 37245776 37246571 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067149.1 MGP_WSBEiJ_G0028092.1 mouse_genomes_project 4 133711098 133734755 - MGP_WSBEiJ_P0067149 Fam76a protein_coding protein_coding MGP_WSBEiJ_T0067150.1 MGP_WSBEiJ_G0028092.1 mouse_genomes_project 4 133724223 133733269 - MGP_WSBEiJ_P0067150 Fam76a protein_coding protein_coding MGP_WSBEiJ_T0001391.1 MGP_WSBEiJ_G0001319.1 mouse_genomes_project 4 144449236 144449455 + TEC TEC MGP_WSBEiJ_T0064663.1 MGP_WSBEiJ_G0027531.1 mouse_genomes_project 4 55213583 55248376 - MGP_WSBEiJ_P0064663 Frrs1l protein_coding protein_coding MGP_WSBEiJ_T0064664.1 MGP_WSBEiJ_G0027531.1 mouse_genomes_project 4 55216554 55248121 - MGP_WSBEiJ_P0064664 Frrs1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067398.1 MGP_WSBEiJ_G0028147.1 mouse_genomes_project 4 136237418 136298344 - MGP_WSBEiJ_P0067398 Clic4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067399.1 MGP_WSBEiJ_G0028147.1 mouse_genomes_project 4 136237537 136298344 - MGP_WSBEiJ_P0067399 Clic4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067400.1 MGP_WSBEiJ_G0028147.1 mouse_genomes_project 4 136243793 136298569 - Clic4 protein_coding retained_intron MGP_WSBEiJ_T0063700.1 MGP_WSBEiJ_G0027315.1 mouse_genomes_project 4 16664199 16689931 + MGP_WSBEiJ_P0063700 Slc7a13 protein_coding protein_coding MGP_WSBEiJ_T0064023.1 MGP_WSBEiJ_G0027393.1 mouse_genomes_project 4 39034549 39037305 - 1110017D15Rik protein_coding processed_transcript MGP_WSBEiJ_T0064024.1 MGP_WSBEiJ_G0027393.1 mouse_genomes_project 4 39034549 39037295 - 1110017D15Rik protein_coding processed_transcript MGP_WSBEiJ_T0064025.1 MGP_WSBEiJ_G0027393.1 mouse_genomes_project 4 39034549 39037300 - 1110017D15Rik protein_coding processed_transcript MGP_WSBEiJ_T0064026.1 MGP_WSBEiJ_G0027393.1 mouse_genomes_project 4 39034549 39047471 - MGP_WSBEiJ_P0064026 1110017D15Rik protein_coding protein_coding MGP_WSBEiJ_T0064027.1 MGP_WSBEiJ_G0027393.1 mouse_genomes_project 4 39034549 39047471 - MGP_WSBEiJ_P0064027 1110017D15Rik protein_coding protein_coding MGP_WSBEiJ_T0064028.1 MGP_WSBEiJ_G0027393.1 mouse_genomes_project 4 39034549 39040990 - MGP_WSBEiJ_P0064028 1110017D15Rik protein_coding protein_coding MGP_WSBEiJ_T0064029.1 MGP_WSBEiJ_G0027393.1 mouse_genomes_project 4 39036664 39047466 - 1110017D15Rik protein_coding processed_transcript MGP_WSBEiJ_T0064030.1 MGP_WSBEiJ_G0027393.1 mouse_genomes_project 4 39038050 39038481 - 1110017D15Rik protein_coding processed_transcript MGP_WSBEiJ_T0007749.1 MGP_WSBEiJ_G0006339.1 mouse_genomes_project 4 62847285 62873433 - Gm11217 lincRNA lincRNA MGP_WSBEiJ_T0064195.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41094366 41102504 - MGP_WSBEiJ_P0064195 Cd72 protein_coding protein_coding MGP_WSBEiJ_T0064196.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41095628 41102440 - MGP_WSBEiJ_P0064196 Cd72 protein_coding protein_coding MGP_WSBEiJ_T0064197.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41095628 41102461 - MGP_WSBEiJ_P0064197 Cd72 protein_coding protein_coding MGP_WSBEiJ_T0064198.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41095628 41102505 - MGP_WSBEiJ_P0064198 Cd72 protein_coding protein_coding MGP_WSBEiJ_T0064199.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41095639 41102503 - MGP_WSBEiJ_P0064199 Cd72 protein_coding protein_coding MGP_WSBEiJ_T0064200.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41095934 41097825 - Cd72 protein_coding retained_intron MGP_WSBEiJ_T0064201.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41097727 41100251 - Cd72 protein_coding retained_intron MGP_WSBEiJ_T0064202.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41100188 41102489 - Cd72 protein_coding retained_intron MGP_WSBEiJ_T0064203.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41100199 41102200 - Cd72 protein_coding processed_transcript MGP_WSBEiJ_T0064204.1 MGP_WSBEiJ_G0027424.1 mouse_genomes_project 4 41100479 41102503 - Cd72 protein_coding processed_transcript MGP_WSBEiJ_T0014240.1 MGP_WSBEiJ_G0012370.1 mouse_genomes_project 4 92596267 92597143 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067659.1 MGP_WSBEiJ_G0028206.1 mouse_genomes_project 4 139898232 139972579 - MGP_WSBEiJ_P0067659 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067660.1 MGP_WSBEiJ_G0028206.1 mouse_genomes_project 4 139905071 139915931 - MGP_WSBEiJ_P0067660 protein_coding protein_coding MGP_WSBEiJ_T0067661.1 MGP_WSBEiJ_G0028206.1 mouse_genomes_project 4 139916477 139972523 - MGP_WSBEiJ_P0067661 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067662.1 MGP_WSBEiJ_G0028206.1 mouse_genomes_project 4 139929076 139942248 - protein_coding processed_transcript MGP_WSBEiJ_T0067663.1 MGP_WSBEiJ_G0028206.1 mouse_genomes_project 4 139935872 139942715 - protein_coding processed_transcript MGP_WSBEiJ_T0066726.1 MGP_WSBEiJ_G0028011.1 mouse_genomes_project 4 128849641 128850387 - MGP_WSBEiJ_P0066726 Hmgb4 protein_coding protein_coding MGP_WSBEiJ_T0098289.1 MGP_WSBEiJ_G0036952.1 mouse_genomes_project 4 119590168 119590275 + Rnu6-ps2 snRNA snRNA MGP_WSBEiJ_T0063987.1 MGP_WSBEiJ_G0027383.1 mouse_genomes_project 4 38504282 38527237 - MGP_WSBEiJ_P0063987 Aqp7 protein_coding protein_coding MGP_WSBEiJ_T0063988.1 MGP_WSBEiJ_G0027383.1 mouse_genomes_project 4 38505660 38512199 - Aqp7 protein_coding processed_transcript MGP_WSBEiJ_T0063989.1 MGP_WSBEiJ_G0027383.1 mouse_genomes_project 4 38505902 38507076 - Aqp7 protein_coding processed_transcript MGP_WSBEiJ_T0065330.1 MGP_WSBEiJ_G0027696.1 mouse_genomes_project 4 99353323 99355706 + MGP_WSBEiJ_P0065330 Efcab7 protein_coding protein_coding MGP_WSBEiJ_T0065331.1 MGP_WSBEiJ_G0027696.1 mouse_genomes_project 4 99353353 99415006 + MGP_WSBEiJ_P0065331 Efcab7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065332.1 MGP_WSBEiJ_G0027696.1 mouse_genomes_project 4 99353565 99355706 + MGP_WSBEiJ_P0065332 Efcab7 protein_coding protein_coding MGP_WSBEiJ_T0065333.1 MGP_WSBEiJ_G0027696.1 mouse_genomes_project 4 99353625 99355706 + MGP_WSBEiJ_P0065333 Efcab7 protein_coding protein_coding MGP_WSBEiJ_T0065334.1 MGP_WSBEiJ_G0027696.1 mouse_genomes_project 4 99355519 99415006 + MGP_WSBEiJ_P0065334 Efcab7 protein_coding protein_coding MGP_WSBEiJ_T0065335.1 MGP_WSBEiJ_G0027696.1 mouse_genomes_project 4 99411281 99415184 + MGP_WSBEiJ_P0065335 Efcab7 protein_coding protein_coding MGP_WSBEiJ_T0065336.1 MGP_WSBEiJ_G0027697.1 mouse_genomes_project 4 99431721 99494224 + MGP_WSBEiJ_P0065336 Pgm2 protein_coding protein_coding MGP_WSBEiJ_T0065337.1 MGP_WSBEiJ_G0027697.1 mouse_genomes_project 4 99458567 99494224 + MGP_WSBEiJ_P0065337 Pgm2 protein_coding protein_coding MGP_WSBEiJ_T0064605.1 MGP_WSBEiJ_G0027516.1 mouse_genomes_project 4 51587707 51701493 + MGP_WSBEiJ_P0064605 Slc44a1 protein_coding protein_coding MGP_WSBEiJ_T0064606.1 MGP_WSBEiJ_G0027516.1 mouse_genomes_project 4 51587707 51769501 + MGP_WSBEiJ_P0064606 Slc44a1 protein_coding protein_coding MGP_WSBEiJ_T0064607.1 MGP_WSBEiJ_G0027516.1 mouse_genomes_project 4 51587789 51718905 + MGP_WSBEiJ_P0064607 Slc44a1 protein_coding protein_coding MGP_WSBEiJ_T0064608.1 MGP_WSBEiJ_G0027516.1 mouse_genomes_project 4 51587968 51679479 + Slc44a1 protein_coding processed_transcript MGP_WSBEiJ_T0064609.1 MGP_WSBEiJ_G0027516.1 mouse_genomes_project 4 51587981 51714563 + MGP_WSBEiJ_P0064609 Slc44a1 protein_coding protein_coding MGP_WSBEiJ_T0064610.1 MGP_WSBEiJ_G0027516.1 mouse_genomes_project 4 51747963 51769010 + Slc44a1 protein_coding processed_transcript MGP_WSBEiJ_T0014151.1 MGP_WSBEiJ_G0012281.1 mouse_genomes_project 4 53690259 53690697 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063631.1 MGP_WSBEiJ_G0027292.1 mouse_genomes_project 4 8755631 8805185 - MGP_WSBEiJ_P0063631 Tmem67 protein_coding protein_coding MGP_WSBEiJ_T0063632.1 MGP_WSBEiJ_G0027292.1 mouse_genomes_project 4 8755639 8805166 - MGP_WSBEiJ_P0063632 Tmem67 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063633.1 MGP_WSBEiJ_G0027292.1 mouse_genomes_project 4 8755921 8875388 - MGP_WSBEiJ_P0063633 Tmem67 protein_coding protein_coding MGP_WSBEiJ_T0063634.1 MGP_WSBEiJ_G0027292.1 mouse_genomes_project 4 8778727 8805235 - Tmem67 protein_coding retained_intron MGP_WSBEiJ_T0063635.1 MGP_WSBEiJ_G0027292.1 mouse_genomes_project 4 8784705 8805155 - Tmem67 protein_coding retained_intron MGP_WSBEiJ_T0063636.1 MGP_WSBEiJ_G0027292.1 mouse_genomes_project 4 8795813 8805160 - Tmem67 protein_coding retained_intron MGP_WSBEiJ_T0014282.1 MGP_WSBEiJ_G0012412.1 mouse_genomes_project 4 107475371 107475922 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064031.1 MGP_WSBEiJ_G0027394.1 mouse_genomes_project 4 39047828 39103013 - MGP_WSBEiJ_P0064031 Fam219a protein_coding protein_coding MGP_WSBEiJ_T0064032.1 MGP_WSBEiJ_G0027394.1 mouse_genomes_project 4 39047828 39103041 - MGP_WSBEiJ_P0064032 Fam219a protein_coding protein_coding MGP_WSBEiJ_T0064033.1 MGP_WSBEiJ_G0027394.1 mouse_genomes_project 4 39047828 39103041 - MGP_WSBEiJ_P0064033 Fam219a protein_coding protein_coding MGP_WSBEiJ_T0064034.1 MGP_WSBEiJ_G0027394.1 mouse_genomes_project 4 39050456 39054875 - Fam219a protein_coding processed_transcript MGP_WSBEiJ_T0064035.1 MGP_WSBEiJ_G0027394.1 mouse_genomes_project 4 39054220 39103042 - Fam219a protein_coding processed_transcript MGP_WSBEiJ_T0065938.1 MGP_WSBEiJ_G0027823.1 mouse_genomes_project 4 115791922 115847892 - Faah protein_coding retained_intron MGP_WSBEiJ_T0065939.1 MGP_WSBEiJ_G0027823.1 mouse_genomes_project 4 115825909 115847933 - Faah protein_coding retained_intron MGP_WSBEiJ_T0065940.1 MGP_WSBEiJ_G0027823.1 mouse_genomes_project 4 115825909 115848143 - MGP_WSBEiJ_P0065940 Faah protein_coding protein_coding MGP_WSBEiJ_T0065941.1 MGP_WSBEiJ_G0027823.1 mouse_genomes_project 4 115827433 115847944 - Faah protein_coding retained_intron MGP_WSBEiJ_T0065942.1 MGP_WSBEiJ_G0027823.1 mouse_genomes_project 4 115827546 115829307 - Faah protein_coding retained_intron MGP_WSBEiJ_T0065943.1 MGP_WSBEiJ_G0027823.1 mouse_genomes_project 4 115827954 115829176 - Faah protein_coding retained_intron MGP_WSBEiJ_T0065944.1 MGP_WSBEiJ_G0027823.1 mouse_genomes_project 4 115830963 115847892 - Faah protein_coding processed_transcript MGP_WSBEiJ_T0065945.1 MGP_WSBEiJ_G0027823.1 mouse_genomes_project 4 115834968 115847914 - Faah protein_coding processed_transcript MGP_WSBEiJ_T0014354.1 MGP_WSBEiJ_G0012484.1 mouse_genomes_project 4 130050017 130050353 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010397.1 MGP_WSBEiJ_G0008554.1 mouse_genomes_project 4 6330360 6330432 + Gm25677 miRNA miRNA MGP_WSBEiJ_T0064908.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70831439 70919910 - MGP_WSBEiJ_P0064908 Tle1 protein_coding protein_coding MGP_WSBEiJ_T0064909.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70832102 70919848 - MGP_WSBEiJ_P0064909 Tle1 protein_coding protein_coding MGP_WSBEiJ_T0064910.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70832104 70919845 - MGP_WSBEiJ_P0064910 Tle1 protein_coding protein_coding MGP_WSBEiJ_T0064911.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70832107 70918083 - Tle1 protein_coding retained_intron MGP_WSBEiJ_T0064912.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70832502 70919143 - MGP_WSBEiJ_P0064912 Tle1 protein_coding protein_coding MGP_WSBEiJ_T0064913.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70832517 70835086 - Tle1 protein_coding processed_transcript MGP_WSBEiJ_T0064914.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70852973 70855701 - MGP_WSBEiJ_P0064914 Tle1 protein_coding protein_coding MGP_WSBEiJ_T0064915.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70872419 70919853 - MGP_WSBEiJ_P0064915 Tle1 protein_coding protein_coding MGP_WSBEiJ_T0064916.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70873111 70918483 - MGP_WSBEiJ_P0064916 Tle1 protein_coding protein_coding MGP_WSBEiJ_T0064917.1 MGP_WSBEiJ_G0027598.1 mouse_genomes_project 4 70882021 70919884 - Tle1 protein_coding processed_transcript MGP_WSBEiJ_T0064539.1 MGP_WSBEiJ_G0027492.1 mouse_genomes_project 4 46500624 46525057 + MGP_WSBEiJ_P0064539 Msantd3 protein_coding protein_coding MGP_WSBEiJ_T0064540.1 MGP_WSBEiJ_G0027492.1 mouse_genomes_project 4 46500768 46524716 + MGP_WSBEiJ_P0064540 Msantd3 protein_coding protein_coding MGP_WSBEiJ_T0064541.1 MGP_WSBEiJ_G0027492.1 mouse_genomes_project 4 46502589 46525058 + MGP_WSBEiJ_P0064541 Msantd3 protein_coding protein_coding MGP_WSBEiJ_T0064542.1 MGP_WSBEiJ_G0027492.1 mouse_genomes_project 4 46523084 46525057 + Msantd3 protein_coding processed_transcript MGP_WSBEiJ_T0014378.1 MGP_WSBEiJ_G0012508.1 mouse_genomes_project 4 140540131 140540741 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064072.1 MGP_WSBEiJ_G0027403.1 mouse_genomes_project 4 39379240 39380330 - MGP_WSBEiJ_P0064072 protein_coding protein_coding MGP_WSBEiJ_T0014054.1 MGP_WSBEiJ_G0012184.1 mouse_genomes_project 4 22289648 22291752 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011361.1 MGP_WSBEiJ_G0009518.1 mouse_genomes_project 4 31938284 31938591 + Gm22849 misc_RNA misc_RNA MGP_WSBEiJ_T0064381.1 MGP_WSBEiJ_G0027455.1 mouse_genomes_project 4 42763571 42778707 + MGP_WSBEiJ_P0064381 Polr1e protein_coding protein_coding MGP_WSBEiJ_T0064382.1 MGP_WSBEiJ_G0027455.1 mouse_genomes_project 4 42763650 42777380 + MGP_WSBEiJ_P0064382 Polr1e protein_coding protein_coding MGP_WSBEiJ_T0064383.1 MGP_WSBEiJ_G0027455.1 mouse_genomes_project 4 42763651 42781593 + MGP_WSBEiJ_P0064383 Polr1e protein_coding protein_coding MGP_WSBEiJ_T0064384.1 MGP_WSBEiJ_G0027455.1 mouse_genomes_project 4 42763685 42771888 + Polr1e protein_coding processed_transcript MGP_WSBEiJ_T0064385.1 MGP_WSBEiJ_G0027455.1 mouse_genomes_project 4 42764220 42777127 + MGP_WSBEiJ_P0064385 Polr1e protein_coding protein_coding MGP_WSBEiJ_T0064386.1 MGP_WSBEiJ_G0027455.1 mouse_genomes_project 4 42774169 42776402 + Polr1e protein_coding processed_transcript MGP_WSBEiJ_T0064387.1 MGP_WSBEiJ_G0027455.1 mouse_genomes_project 4 42776283 42777375 + Polr1e protein_coding processed_transcript MGP_WSBEiJ_T0064462.1 MGP_WSBEiJ_G0027473.1 mouse_genomes_project 4 44227988 44240990 - MGP_WSBEiJ_P0064462 Trmo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064463.1 MGP_WSBEiJ_G0027473.1 mouse_genomes_project 4 44228462 44240995 - MGP_WSBEiJ_P0064463 Trmo protein_coding protein_coding MGP_WSBEiJ_T0064464.1 MGP_WSBEiJ_G0027473.1 mouse_genomes_project 4 44231346 44241009 - MGP_WSBEiJ_P0064464 Trmo protein_coding protein_coding MGP_WSBEiJ_T0014345.1 MGP_WSBEiJ_G0012475.1 mouse_genomes_project 4 127015038 127015457 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096823.1 MGP_WSBEiJ_G0035504.1 mouse_genomes_project 4 57951020 57951492 + pseudogene pseudogene MGP_WSBEiJ_T0004378.1 MGP_WSBEiJ_G0003813.1 mouse_genomes_project 4 50523600 50531718 - Smc2os antisense antisense MGP_WSBEiJ_T0099519.1 MGP_WSBEiJ_G0038182.1 mouse_genomes_project 4 49746166 49746275 + Gm23043 snoRNA snoRNA MGP_WSBEiJ_T0014004.1 MGP_WSBEiJ_G0012134.1 mouse_genomes_project 4 5575828 5576226 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007817.1 MGP_WSBEiJ_G0006395.1 mouse_genomes_project 4 124612599 124620141 - Gm12916 lincRNA lincRNA MGP_WSBEiJ_T0067807.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142610796 142622615 - Necap2 protein_coding processed_transcript MGP_WSBEiJ_T0067808.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142610796 142622630 - MGP_WSBEiJ_P0067808 Necap2 protein_coding protein_coding MGP_WSBEiJ_T0067809.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142611635 142619322 - Necap2 protein_coding retained_intron MGP_WSBEiJ_T0067810.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142611683 142613128 - Necap2 protein_coding retained_intron MGP_WSBEiJ_T0067811.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142611802 142616127 - Necap2 protein_coding retained_intron MGP_WSBEiJ_T0067812.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142611849 142617993 - MGP_WSBEiJ_P0067812 Necap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067813.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142612494 142622630 - Necap2 protein_coding processed_transcript MGP_WSBEiJ_T0067814.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142614367 142622630 - Necap2 protein_coding processed_transcript MGP_WSBEiJ_T0067815.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142614437 142616061 - Necap2 protein_coding retained_intron MGP_WSBEiJ_T0067816.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142614465 142622567 - Necap2 protein_coding retained_intron MGP_WSBEiJ_T0067817.1 MGP_WSBEiJ_G0028244.1 mouse_genomes_project 4 142616616 142622630 - Necap2 protein_coding retained_intron MGP_WSBEiJ_T0014100.1 MGP_WSBEiJ_G0012230.1 mouse_genomes_project 4 35696888 35697432 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064245.1 MGP_WSBEiJ_G0027431.1 mouse_genomes_project 4 41218743 41223470 + MGP_WSBEiJ_P0064245 Creb3 protein_coding protein_coding MGP_WSBEiJ_T0064246.1 MGP_WSBEiJ_G0027431.1 mouse_genomes_project 4 41219224 41223207 + MGP_WSBEiJ_P0064246 Creb3 protein_coding protein_coding MGP_WSBEiJ_T0064247.1 MGP_WSBEiJ_G0027431.1 mouse_genomes_project 4 41219358 41221728 + MGP_WSBEiJ_P0064247 Creb3 protein_coding protein_coding MGP_WSBEiJ_T0064248.1 MGP_WSBEiJ_G0027431.1 mouse_genomes_project 4 41219678 41222937 + Creb3 protein_coding retained_intron MGP_WSBEiJ_T0064249.1 MGP_WSBEiJ_G0027431.1 mouse_genomes_project 4 41219841 41221962 + Creb3 protein_coding retained_intron MGP_WSBEiJ_T0064250.1 MGP_WSBEiJ_G0027431.1 mouse_genomes_project 4 41222427 41223114 + Creb3 protein_coding retained_intron MGP_WSBEiJ_T0098299.1 MGP_WSBEiJ_G0036962.1 mouse_genomes_project 4 133026457 133026591 - Rnu11 snRNA snRNA MGP_WSBEiJ_T0067241.1 MGP_WSBEiJ_G0028114.1 mouse_genomes_project 4 134885508 134888808 - MGP_WSBEiJ_P0067241 protein_coding protein_coding MGP_WSBEiJ_T0067242.1 MGP_WSBEiJ_G0028114.1 mouse_genomes_project 4 134885683 134888054 - protein_coding retained_intron MGP_WSBEiJ_T0067243.1 MGP_WSBEiJ_G0028114.1 mouse_genomes_project 4 134885683 134887424 - protein_coding processed_transcript MGP_WSBEiJ_T0067244.1 MGP_WSBEiJ_G0028114.1 mouse_genomes_project 4 134885683 134887400 - protein_coding processed_transcript MGP_WSBEiJ_T0067245.1 MGP_WSBEiJ_G0028114.1 mouse_genomes_project 4 134885683 134888808 - protein_coding processed_transcript MGP_WSBEiJ_T0067246.1 MGP_WSBEiJ_G0028114.1 mouse_genomes_project 4 134885683 134888039 - MGP_WSBEiJ_P0067246 protein_coding protein_coding MGP_WSBEiJ_T0067247.1 MGP_WSBEiJ_G0028114.1 mouse_genomes_project 4 134885737 134888036 - protein_coding retained_intron MGP_WSBEiJ_T0067248.1 MGP_WSBEiJ_G0028114.1 mouse_genomes_project 4 134885747 134888006 - protein_coding retained_intron MGP_WSBEiJ_T0067612.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139256287 139385001 + MGP_WSBEiJ_P0067612 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067613.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139256287 139395868 + MGP_WSBEiJ_P0067613 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067614.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139256287 139407501 + MGP_WSBEiJ_P0067614 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067615.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139256721 139494141 + MGP_WSBEiJ_P0067615 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067616.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139256721 139494141 + MGP_WSBEiJ_P0067616 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067617.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139256741 139257423 + Eif4g3 protein_coding processed_transcript MGP_WSBEiJ_T0067618.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139256749 139334725 + Eif4g3 protein_coding processed_transcript MGP_WSBEiJ_T0067619.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139256778 139493173 + MGP_WSBEiJ_P0067619 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067620.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139257214 139494150 + MGP_WSBEiJ_P0067620 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067621.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139267756 139382976 + MGP_WSBEiJ_P0067621 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067622.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139431714 139495552 + MGP_WSBEiJ_P0067622 Eif4g3 protein_coding protein_coding MGP_WSBEiJ_T0067623.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139459765 139495552 + Eif4g3 protein_coding processed_transcript MGP_WSBEiJ_T0067624.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139462421 139470341 + Eif4g3 protein_coding retained_intron MGP_WSBEiJ_T0067625.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139466368 139470119 + Eif4g3 protein_coding processed_transcript MGP_WSBEiJ_T0067626.1 MGP_WSBEiJ_G0028196.1 mouse_genomes_project 4 139488692 139490424 + Eif4g3 protein_coding processed_transcript MGP_WSBEiJ_T0014350.1 MGP_WSBEiJ_G0012480.1 mouse_genomes_project 4 127575003 127575223 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067642.1 MGP_WSBEiJ_G0028199.1 mouse_genomes_project 4 139541431 139595800 + MGP_WSBEiJ_P0067642 Kif17 protein_coding protein_coding MGP_WSBEiJ_T0067645.1 MGP_WSBEiJ_G0028199.1 mouse_genomes_project 4 139553254 139595325 + MGP_WSBEiJ_P0067645 Kif17 protein_coding protein_coding MGP_WSBEiJ_T0067646.1 MGP_WSBEiJ_G0028199.1 mouse_genomes_project 4 139553494 139595215 + MGP_WSBEiJ_P0067646 Kif17 protein_coding protein_coding MGP_WSBEiJ_T0067647.1 MGP_WSBEiJ_G0028199.1 mouse_genomes_project 4 139553521 139579162 + Kif17 protein_coding retained_intron MGP_WSBEiJ_T0068573.1 MGP_WSBEiJ_G0028409.1 mouse_genomes_project 4 158040443 158041745 + Tmem52 protein_coding retained_intron MGP_WSBEiJ_T0068574.1 MGP_WSBEiJ_G0028409.1 mouse_genomes_project 4 158040443 158042188 + MGP_WSBEiJ_P0068574 Tmem52 protein_coding protein_coding MGP_WSBEiJ_T0068575.1 MGP_WSBEiJ_G0028409.1 mouse_genomes_project 4 158040443 158042188 + MGP_WSBEiJ_P0068575 Tmem52 protein_coding protein_coding MGP_WSBEiJ_T0068576.1 MGP_WSBEiJ_G0028409.1 mouse_genomes_project 4 158040460 158042187 + MGP_WSBEiJ_P0068576 Tmem52 protein_coding protein_coding MGP_WSBEiJ_T0068577.1 MGP_WSBEiJ_G0028409.1 mouse_genomes_project 4 158040476 158042119 + Tmem52 protein_coding retained_intron MGP_WSBEiJ_T0014377.1 MGP_WSBEiJ_G0012507.1 mouse_genomes_project 4 138385898 138386585 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068689.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158491932 158506657 + MGP_WSBEiJ_P0068689 Acap3 protein_coding protein_coding MGP_WSBEiJ_T0068690.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158491985 158506658 + MGP_WSBEiJ_P0068690 Acap3 protein_coding protein_coding MGP_WSBEiJ_T0068691.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158492012 158498881 + Acap3 protein_coding processed_transcript MGP_WSBEiJ_T0068692.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158492382 158499023 + Acap3 protein_coding processed_transcript MGP_WSBEiJ_T0068693.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158492422 158506658 + Acap3 protein_coding processed_transcript MGP_WSBEiJ_T0068694.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158500996 158502099 + Acap3 protein_coding retained_intron MGP_WSBEiJ_T0068695.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158501987 158504512 + Acap3 protein_coding retained_intron MGP_WSBEiJ_T0068696.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158502649 158504743 + Acap3 protein_coding processed_transcript MGP_WSBEiJ_T0068697.1 MGP_WSBEiJ_G0028432.1 mouse_genomes_project 4 158504760 158505319 + Acap3 protein_coding processed_transcript MGP_WSBEiJ_T0066623.1 MGP_WSBEiJ_G0027984.1 mouse_genomes_project 4 126696241 126705759 - MGP_WSBEiJ_P0066623 Map7d1 protein_coding protein_coding MGP_WSBEiJ_T0066624.1 MGP_WSBEiJ_G0027984.1 mouse_genomes_project 4 126696241 126723776 - MGP_WSBEiJ_P0066624 Map7d1 protein_coding protein_coding MGP_WSBEiJ_T0066625.1 MGP_WSBEiJ_G0027984.1 mouse_genomes_project 4 126696241 126723782 - MGP_WSBEiJ_P0066625 Map7d1 protein_coding protein_coding MGP_WSBEiJ_T0066626.1 MGP_WSBEiJ_G0027984.1 mouse_genomes_project 4 126696241 126723842 - MGP_WSBEiJ_P0066626 Map7d1 protein_coding protein_coding MGP_WSBEiJ_T0066627.1 MGP_WSBEiJ_G0027984.1 mouse_genomes_project 4 126697037 126697623 - Map7d1 protein_coding retained_intron MGP_WSBEiJ_T0066628.1 MGP_WSBEiJ_G0027984.1 mouse_genomes_project 4 126697694 126698851 - Map7d1 protein_coding retained_intron MGP_WSBEiJ_T0098284.1 MGP_WSBEiJ_G0036947.1 mouse_genomes_project 4 116795921 116796026 + Gm26355 snRNA snRNA MGP_WSBEiJ_T0067142.1 MGP_WSBEiJ_G0028090.1 mouse_genomes_project 4 133632349 133648462 - MGP_WSBEiJ_P0067142 Ppp1r8 protein_coding protein_coding MGP_WSBEiJ_T0067143.1 MGP_WSBEiJ_G0028090.1 mouse_genomes_project 4 133633248 133648416 - MGP_WSBEiJ_P0067143 Ppp1r8 protein_coding protein_coding MGP_WSBEiJ_T0067144.1 MGP_WSBEiJ_G0028090.1 mouse_genomes_project 4 133634389 133638271 - Ppp1r8 protein_coding processed_transcript MGP_WSBEiJ_T0067145.1 MGP_WSBEiJ_G0028090.1 mouse_genomes_project 4 133635781 133648417 - Ppp1r8 protein_coding processed_transcript MGP_WSBEiJ_T0067146.1 MGP_WSBEiJ_G0028090.1 mouse_genomes_project 4 133639993 133648427 - Ppp1r8 protein_coding processed_transcript MGP_WSBEiJ_T0014311.1 MGP_WSBEiJ_G0012441.1 mouse_genomes_project 4 117679437 117679981 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066486.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612790 123974190 - MGP_WSBEiJ_P0066486 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066487.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612790 123632955 - MGP_WSBEiJ_P0066487 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066488.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612873 123635391 - MGP_WSBEiJ_P0066488 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066489.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612873 123974190 - MGP_WSBEiJ_P0066489 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066490.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612873 123754349 - MGP_WSBEiJ_P0066490 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066491.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612873 123779714 - MGP_WSBEiJ_P0066491 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066492.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612873 123629506 - MGP_WSBEiJ_P0066492 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066493.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612873 123825447 - MGP_WSBEiJ_P0066493 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066494.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612875 123807070 - MGP_WSBEiJ_P0066494 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066495.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612875 123974190 - MGP_WSBEiJ_P0066495 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066496.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123612877 123974190 - MGP_WSBEiJ_P0066496 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066497.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123647302 123654714 - MGP_WSBEiJ_P0066497 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066498.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123661436 123671672 - Macf1 protein_coding processed_transcript MGP_WSBEiJ_T0066499.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123734660 123807212 - MGP_WSBEiJ_P0066499 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0066500.1 MGP_WSBEiJ_G0027949.1 mouse_genomes_project 4 123734660 123952889 - MGP_WSBEiJ_P0066500 Macf1 protein_coding protein_coding MGP_WSBEiJ_T0063958.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38162274 38163917 + Dnaja1 protein_coding processed_transcript MGP_WSBEiJ_T0063959.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38162604 38176422 + MGP_WSBEiJ_P0063959 Dnaja1 protein_coding protein_coding MGP_WSBEiJ_T0063960.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38162683 38171460 + Dnaja1 protein_coding processed_transcript MGP_WSBEiJ_T0063961.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38163046 38175293 + Dnaja1 protein_coding processed_transcript MGP_WSBEiJ_T0063962.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38163046 38178607 + MGP_WSBEiJ_P0063962 Dnaja1 protein_coding protein_coding MGP_WSBEiJ_T0063963.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38163054 38173023 + MGP_WSBEiJ_P0063963 Dnaja1 protein_coding protein_coding MGP_WSBEiJ_T0063964.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38163069 38168275 + MGP_WSBEiJ_P0063964 Dnaja1 protein_coding protein_coding MGP_WSBEiJ_T0063965.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38163239 38166294 + MGP_WSBEiJ_P0063965 Dnaja1 protein_coding protein_coding MGP_WSBEiJ_T0063966.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38163484 38164233 + Dnaja1 protein_coding processed_transcript MGP_WSBEiJ_T0063967.1 MGP_WSBEiJ_G0027376.1 mouse_genomes_project 4 38164170 38173527 + Dnaja1 protein_coding processed_transcript MGP_WSBEiJ_T0064515.1 MGP_WSBEiJ_G0027487.1 mouse_genomes_project 4 45988639 46032299 + MGP_WSBEiJ_P0064515 Nr4a3 protein_coding protein_coding MGP_WSBEiJ_T0064516.1 MGP_WSBEiJ_G0027487.1 mouse_genomes_project 4 45988717 45995362 + Nr4a3 protein_coding processed_transcript MGP_WSBEiJ_T0064517.1 MGP_WSBEiJ_G0027487.1 mouse_genomes_project 4 45994310 46032300 + MGP_WSBEiJ_P0064517 Nr4a3 protein_coding protein_coding MGP_WSBEiJ_T0064518.1 MGP_WSBEiJ_G0027487.1 mouse_genomes_project 4 45996442 46001938 + Nr4a3 protein_coding processed_transcript MGP_WSBEiJ_T0098300.1 MGP_WSBEiJ_G0036963.1 mouse_genomes_project 4 133225052 133225146 + Gm23055 snRNA snRNA MGP_WSBEiJ_T0063456.1 MGP_WSBEiJ_G0027256.1 mouse_genomes_project 4 251683 406315 + MGP_WSBEiJ_P0063456 protein_coding protein_coding MGP_WSBEiJ_T0063457.1 MGP_WSBEiJ_G0027256.1 mouse_genomes_project 4 251695 406314 + MGP_WSBEiJ_P0063457 protein_coding protein_coding MGP_WSBEiJ_T0063458.1 MGP_WSBEiJ_G0027256.1 mouse_genomes_project 4 251698 324256 + protein_coding processed_transcript MGP_WSBEiJ_T0017477.1 MGP_WSBEiJ_G0014982.1 mouse_genomes_project 4 95337404 95345320 - 9530080O11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017478.1 MGP_WSBEiJ_G0014982.1 mouse_genomes_project 4 95337939 95344700 - 9530080O11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0068353.1 MGP_WSBEiJ_G0028373.1 mouse_genomes_project 4 154651724 154661602 + MGP_WSBEiJ_P0068353 Icmt protein_coding protein_coding MGP_WSBEiJ_T0068354.1 MGP_WSBEiJ_G0028373.1 mouse_genomes_project 4 154651801 154661601 + MGP_WSBEiJ_P0068354 Icmt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068355.1 MGP_WSBEiJ_G0028373.1 mouse_genomes_project 4 154652153 154655250 + Icmt protein_coding processed_transcript MGP_WSBEiJ_T0068356.1 MGP_WSBEiJ_G0028373.1 mouse_genomes_project 4 154659870 154661549 + Icmt protein_coding processed_transcript MGP_WSBEiJ_T0099513.1 MGP_WSBEiJ_G0038176.1 mouse_genomes_project 4 40777186 40777316 - Gm23709 snoRNA snoRNA MGP_WSBEiJ_T0067699.1 MGP_WSBEiJ_G0028219.1 mouse_genomes_project 4 140485540 140516150 - MGP_WSBEiJ_P0067699 Minos1 protein_coding protein_coding MGP_WSBEiJ_T0067700.1 MGP_WSBEiJ_G0028219.1 mouse_genomes_project 4 140487514 140489679 - Minos1 protein_coding processed_transcript MGP_WSBEiJ_T0067701.1 MGP_WSBEiJ_G0028219.1 mouse_genomes_project 4 140487546 140494977 - Minos1 protein_coding processed_transcript MGP_WSBEiJ_T0067702.1 MGP_WSBEiJ_G0028219.1 mouse_genomes_project 4 140487625 140516031 - Minos1 protein_coding processed_transcript MGP_WSBEiJ_T0100809.1 MGP_WSBEiJ_G0039267.1 mouse_genomes_project 4 41438534 41438836 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0067226.1 MGP_WSBEiJ_G0028112.1 mouse_genomes_project 4 134575119 134650417 - MGP_WSBEiJ_P0067226 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067227.1 MGP_WSBEiJ_G0028112.1 mouse_genomes_project 4 134575119 134588303 - MGP_WSBEiJ_P0067227 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067228.1 MGP_WSBEiJ_G0028112.1 mouse_genomes_project 4 134584679 134617765 - protein_coding retained_intron MGP_WSBEiJ_T0067229.1 MGP_WSBEiJ_G0028112.1 mouse_genomes_project 4 134589783 134650417 - MGP_WSBEiJ_P0067229 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067230.1 MGP_WSBEiJ_G0028112.1 mouse_genomes_project 4 134614069 134615489 - protein_coding retained_intron MGP_WSBEiJ_T0067231.1 MGP_WSBEiJ_G0028112.1 mouse_genomes_project 4 134615491 134618595 - MGP_WSBEiJ_P0067231 protein_coding protein_coding MGP_WSBEiJ_T0065235.1 MGP_WSBEiJ_G0027672.1 mouse_genomes_project 4 95472551 95516466 - MGP_WSBEiJ_P0065235 Cyp2j12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065236.1 MGP_WSBEiJ_G0027672.1 mouse_genomes_project 4 95472806 95516452 - MGP_WSBEiJ_P0065236 Cyp2j12 protein_coding protein_coding MGP_WSBEiJ_T0068024.1 MGP_WSBEiJ_G0028311.1 mouse_genomes_project 4 150089985 150102513 - MGP_WSBEiJ_P0068024 Agtrap protein_coding protein_coding MGP_WSBEiJ_T0068025.1 MGP_WSBEiJ_G0028311.1 mouse_genomes_project 4 150093415 150097681 - Agtrap protein_coding processed_transcript MGP_WSBEiJ_T0068026.1 MGP_WSBEiJ_G0028311.1 mouse_genomes_project 4 150096786 150102513 - Agtrap protein_coding retained_intron MGP_WSBEiJ_T0100089.1 MGP_WSBEiJ_G0038697.1 mouse_genomes_project 4 41815306 41817538 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100090.1 MGP_WSBEiJ_G0038697.1 mouse_genomes_project 4 41816651 41816957 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0014387.1 MGP_WSBEiJ_G0012517.1 mouse_genomes_project 4 145397007 145397568 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014083.1 MGP_WSBEiJ_G0012213.1 mouse_genomes_project 4 30174855 30175182 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068650.1 MGP_WSBEiJ_G0028425.1 mouse_genomes_project 4 158427286 158428751 + MGP_WSBEiJ_P0068650 Aurkaip1 protein_coding protein_coding MGP_WSBEiJ_T0068651.1 MGP_WSBEiJ_G0028425.1 mouse_genomes_project 4 158427365 158429356 + MGP_WSBEiJ_P0068651 Aurkaip1 protein_coding protein_coding MGP_WSBEiJ_T0068652.1 MGP_WSBEiJ_G0028425.1 mouse_genomes_project 4 158427632 158428477 + Aurkaip1 protein_coding retained_intron MGP_WSBEiJ_T0068653.1 MGP_WSBEiJ_G0028425.1 mouse_genomes_project 4 158427672 158429074 + MGP_WSBEiJ_P0068653 Aurkaip1 protein_coding protein_coding MGP_WSBEiJ_T0068654.1 MGP_WSBEiJ_G0028425.1 mouse_genomes_project 4 158427678 158428541 + Aurkaip1 protein_coding processed_transcript MGP_WSBEiJ_T0068655.1 MGP_WSBEiJ_G0028425.1 mouse_genomes_project 4 158427682 158429044 + MGP_WSBEiJ_P0068655 Aurkaip1 protein_coding protein_coding MGP_WSBEiJ_T0068167.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151792483 151850006 - MGP_WSBEiJ_P0068167 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068168.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151792483 151850016 - MGP_WSBEiJ_P0068168 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068169.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151792485 151852920 - MGP_WSBEiJ_P0068169 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068170.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151792485 151820628 - MGP_WSBEiJ_P0068170 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068171.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151792486 151822478 - MGP_WSBEiJ_P0068171 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068172.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151793132 151849913 - MGP_WSBEiJ_P0068172 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068173.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151793955 151809545 - MGP_WSBEiJ_P0068173 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068174.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151804503 151821620 - MGP_WSBEiJ_P0068174 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068175.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151804582 151822059 - MGP_WSBEiJ_P0068175 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068176.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151804744 151849912 - MGP_WSBEiJ_P0068176 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068177.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151804909 151849860 - MGP_WSBEiJ_P0068177 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068178.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151809413 151853889 - MGP_WSBEiJ_P0068178 Pik3cd protein_coding protein_coding MGP_WSBEiJ_T0068179.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151819872 151822527 - Pik3cd protein_coding processed_transcript MGP_WSBEiJ_T0068180.1 MGP_WSBEiJ_G0028339.1 mouse_genomes_project 4 151820198 151852920 - Pik3cd protein_coding processed_transcript MGP_WSBEiJ_T0014071.1 MGP_WSBEiJ_G0012201.1 mouse_genomes_project 4 26201764 26201943 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068187.1 MGP_WSBEiJ_G0028341.1 mouse_genomes_project 4 151894780 151926509 - MGP_WSBEiJ_P0068187 Slc25a33 protein_coding protein_coding MGP_WSBEiJ_T0067847.1 MGP_WSBEiJ_G0028253.1 mouse_genomes_project 4 142974564 142985956 - MGP_WSBEiJ_P0067847 Clcnkb protein_coding protein_coding MGP_WSBEiJ_T0067848.1 MGP_WSBEiJ_G0028253.1 mouse_genomes_project 4 142974564 142985956 - MGP_WSBEiJ_P0067848 Clcnkb protein_coding protein_coding MGP_WSBEiJ_T0067849.1 MGP_WSBEiJ_G0028253.1 mouse_genomes_project 4 142974564 142975584 - MGP_WSBEiJ_P0067849 Clcnkb protein_coding protein_coding MGP_WSBEiJ_T0067850.1 MGP_WSBEiJ_G0028253.1 mouse_genomes_project 4 142984236 142985903 - Clcnkb protein_coding processed_transcript MGP_WSBEiJ_T0064533.1 MGP_WSBEiJ_G0027491.1 mouse_genomes_project 4 46387798 46427142 - MGP_WSBEiJ_P0064533 Tex10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064534.1 MGP_WSBEiJ_G0027491.1 mouse_genomes_project 4 46387798 46431667 - MGP_WSBEiJ_P0064534 Tex10 protein_coding protein_coding MGP_WSBEiJ_T0064535.1 MGP_WSBEiJ_G0027491.1 mouse_genomes_project 4 46387896 46431630 - MGP_WSBEiJ_P0064535 Tex10 protein_coding protein_coding MGP_WSBEiJ_T0064536.1 MGP_WSBEiJ_G0027491.1 mouse_genomes_project 4 46416400 46417535 - Tex10 protein_coding retained_intron MGP_WSBEiJ_T0064537.1 MGP_WSBEiJ_G0027491.1 mouse_genomes_project 4 46425924 46428214 - Tex10 protein_coding processed_transcript MGP_WSBEiJ_T0064538.1 MGP_WSBEiJ_G0027491.1 mouse_genomes_project 4 46427426 46431551 - Tex10 protein_coding retained_intron MGP_WSBEiJ_T0007844.1 MGP_WSBEiJ_G0006412.1 mouse_genomes_project 4 130639260 130642190 + E330017L17Rik lincRNA lincRNA MGP_WSBEiJ_T0007845.1 MGP_WSBEiJ_G0006412.1 mouse_genomes_project 4 130639270 130642055 + E330017L17Rik lincRNA lincRNA MGP_WSBEiJ_T0007846.1 MGP_WSBEiJ_G0006412.1 mouse_genomes_project 4 130639302 130641810 + E330017L17Rik lincRNA lincRNA MGP_WSBEiJ_T0007847.1 MGP_WSBEiJ_G0006412.1 mouse_genomes_project 4 130639477 130655622 + E330017L17Rik lincRNA lincRNA MGP_WSBEiJ_T0067664.1 MGP_WSBEiJ_G0028207.1 mouse_genomes_project 4 140061939 140077230 - MGP_WSBEiJ_P0067664 Ubxn10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067665.1 MGP_WSBEiJ_G0028207.1 mouse_genomes_project 4 140070589 140077274 - MGP_WSBEiJ_P0067665 Ubxn10 protein_coding protein_coding MGP_WSBEiJ_T0067666.1 MGP_WSBEiJ_G0028207.1 mouse_genomes_project 4 140070589 140089448 - MGP_WSBEiJ_P0067666 Ubxn10 protein_coding protein_coding MGP_WSBEiJ_T0067667.1 MGP_WSBEiJ_G0028207.1 mouse_genomes_project 4 140070889 140076867 - MGP_WSBEiJ_P0067667 Ubxn10 protein_coding protein_coding MGP_WSBEiJ_T0067671.1 MGP_WSBEiJ_G0028207.1 mouse_genomes_project 4 140083907 140089417 - Ubxn10 protein_coding processed_transcript MGP_WSBEiJ_T0010447.1 MGP_WSBEiJ_G0008604.1 mouse_genomes_project 4 120909970 120910062 + Mir30f miRNA miRNA MGP_WSBEiJ_T0014052.1 MGP_WSBEiJ_G0012182.1 mouse_genomes_project 4 22170825 22171519 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065596.1 MGP_WSBEiJ_G0027753.1 mouse_genomes_project 4 107227064 107228510 + Glis1 protein_coding processed_transcript MGP_WSBEiJ_T0065597.1 MGP_WSBEiJ_G0027753.1 mouse_genomes_project 4 107227090 107354964 + MGP_WSBEiJ_P0065597 Glis1 protein_coding protein_coding MGP_WSBEiJ_T0065598.1 MGP_WSBEiJ_G0027753.1 mouse_genomes_project 4 107227192 107428443 + MGP_WSBEiJ_P0065598 Glis1 protein_coding protein_coding MGP_WSBEiJ_T0065599.1 MGP_WSBEiJ_G0027753.1 mouse_genomes_project 4 107231496 107428443 + MGP_WSBEiJ_P0065599 Glis1 protein_coding protein_coding MGP_WSBEiJ_T0065600.1 MGP_WSBEiJ_G0027753.1 mouse_genomes_project 4 107373350 107420843 + Glis1 protein_coding processed_transcript MGP_WSBEiJ_T0065601.1 MGP_WSBEiJ_G0027753.1 mouse_genomes_project 4 107408376 107425766 + Glis1 protein_coding processed_transcript MGP_WSBEiJ_T0007708.1 MGP_WSBEiJ_G0006305.1 mouse_genomes_project 4 37772596 37779366 + 4930509K18Rik lincRNA lincRNA MGP_WSBEiJ_T0066302.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119274214 119290244 + MGP_WSBEiJ_P0066302 P3h1 protein_coding protein_coding MGP_WSBEiJ_T0066303.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119274238 119290247 + MGP_WSBEiJ_P0066303 P3h1 protein_coding protein_coding MGP_WSBEiJ_T0066304.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119274245 119289639 + P3h1 protein_coding processed_transcript MGP_WSBEiJ_T0066305.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119274245 119290244 + MGP_WSBEiJ_P0066305 P3h1 protein_coding protein_coding MGP_WSBEiJ_T0066306.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119274253 119289641 + MGP_WSBEiJ_P0066306 P3h1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066307.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119274289 119290257 + MGP_WSBEiJ_P0066307 P3h1 protein_coding protein_coding MGP_WSBEiJ_T0066308.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119275099 119278216 + P3h1 protein_coding processed_transcript MGP_WSBEiJ_T0066309.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119276643 119282776 + P3h1 protein_coding processed_transcript MGP_WSBEiJ_T0066310.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119279225 119285430 + P3h1 protein_coding processed_transcript MGP_WSBEiJ_T0066311.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119286294 119289405 + P3h1 protein_coding processed_transcript MGP_WSBEiJ_T0066312.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119287910 119289644 + P3h1 protein_coding processed_transcript MGP_WSBEiJ_T0066313.1 MGP_WSBEiJ_G0027902.1 mouse_genomes_project 4 119288133 119289326 + P3h1 protein_coding retained_intron MGP_WSBEiJ_T0068321.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446051 154491807 - MGP_WSBEiJ_P0068321 Espn protein_coding protein_coding MGP_WSBEiJ_T0068322.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446056 154491971 - MGP_WSBEiJ_P0068322 Espn protein_coding protein_coding MGP_WSBEiJ_T0068323.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446577 154459316 - MGP_WSBEiJ_P0068323 Espn protein_coding protein_coding MGP_WSBEiJ_T0068324.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446588 154491822 - MGP_WSBEiJ_P0068324 Espn protein_coding protein_coding MGP_WSBEiJ_T0068325.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446590 154462255 - MGP_WSBEiJ_P0068325 Espn protein_coding protein_coding MGP_WSBEiJ_T0068326.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446601 154462727 - Espn protein_coding processed_transcript MGP_WSBEiJ_T0068327.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446840 154466715 - MGP_WSBEiJ_P0068327 Espn protein_coding protein_coding MGP_WSBEiJ_T0068328.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446840 154466715 - MGP_WSBEiJ_P0068328 Espn protein_coding protein_coding MGP_WSBEiJ_T0068329.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446840 154466715 - MGP_WSBEiJ_P0068329 Espn protein_coding protein_coding MGP_WSBEiJ_T0068330.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446840 154466672 - MGP_WSBEiJ_P0068330 Espn protein_coding protein_coding MGP_WSBEiJ_T0068331.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446840 154466715 - MGP_WSBEiJ_P0068331 Espn protein_coding protein_coding MGP_WSBEiJ_T0068332.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446840 154466672 - MGP_WSBEiJ_P0068332 Espn protein_coding protein_coding MGP_WSBEiJ_T0068333.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446840 154466672 - MGP_WSBEiJ_P0068333 Espn protein_coding protein_coding MGP_WSBEiJ_T0068334.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446840 154466672 - MGP_WSBEiJ_P0068334 Espn protein_coding protein_coding MGP_WSBEiJ_T0068335.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154446851 154462231 - Espn protein_coding processed_transcript MGP_WSBEiJ_T0068336.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154453290 154462256 - Espn protein_coding processed_transcript MGP_WSBEiJ_T0068337.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154454105 154486987 - MGP_WSBEiJ_P0068337 Espn protein_coding protein_coding MGP_WSBEiJ_T0068338.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154458184 154462247 - Espn protein_coding processed_transcript MGP_WSBEiJ_T0068339.1 MGP_WSBEiJ_G0028368.1 mouse_genomes_project 4 154458532 154461620 - Espn protein_coding processed_transcript MGP_WSBEiJ_T0004479.1 MGP_WSBEiJ_G0003890.1 mouse_genomes_project 4 138933503 138947489 - Rap1gapos antisense antisense MGP_WSBEiJ_T0010432.1 MGP_WSBEiJ_G0008589.1 mouse_genomes_project 4 88185445 88185551 - Mir31 miRNA miRNA MGP_WSBEiJ_T0014332.1 MGP_WSBEiJ_G0012462.1 mouse_genomes_project 4 121550005 121550340 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004417.1 MGP_WSBEiJ_G0003842.1 mouse_genomes_project 4 107131989 107135981 - antisense antisense MGP_WSBEiJ_T0004478.1 MGP_WSBEiJ_G0003889.1 mouse_genomes_project 4 138632939 138634743 - Gm13010 antisense antisense MGP_WSBEiJ_T0014033.1 MGP_WSBEiJ_G0012163.1 mouse_genomes_project 4 15038397 15038619 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007713.1 MGP_WSBEiJ_G0006310.1 mouse_genomes_project 4 41395761 41400274 + lincRNA lincRNA MGP_WSBEiJ_T0010439.1 MGP_WSBEiJ_G0008596.1 mouse_genomes_project 4 107227045 107227130 + Gm24804 miRNA miRNA MGP_WSBEiJ_T0004431.1 MGP_WSBEiJ_G0003850.1 mouse_genomes_project 4 115698445 115698705 - Gm29434 antisense antisense MGP_WSBEiJ_T0064837.1 MGP_WSBEiJ_G0027577.1 mouse_genomes_project 4 61671883 61678311 - Kif12 protein_coding processed_transcript MGP_WSBEiJ_T0064838.1 MGP_WSBEiJ_G0027577.1 mouse_genomes_project 4 61671886 61678396 - MGP_WSBEiJ_P0064838 Kif12 protein_coding protein_coding MGP_WSBEiJ_T0064839.1 MGP_WSBEiJ_G0027577.1 mouse_genomes_project 4 61673726 61677047 - Kif12 protein_coding processed_transcript MGP_WSBEiJ_T0064840.1 MGP_WSBEiJ_G0027577.1 mouse_genomes_project 4 61673978 61677439 - Kif12 protein_coding processed_transcript MGP_WSBEiJ_T0064841.1 MGP_WSBEiJ_G0027577.1 mouse_genomes_project 4 61675656 61677995 - Kif12 protein_coding processed_transcript MGP_WSBEiJ_T0097174.1 MGP_WSBEiJ_G0035855.1 mouse_genomes_project 4 18145051 18145407 + Gm22817 ribozyme ribozyme MGP_WSBEiJ_T0014046.1 MGP_WSBEiJ_G0012176.1 mouse_genomes_project 4 19383033 19383605 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064672.1 MGP_WSBEiJ_G0027533.1 mouse_genomes_project 4 55462243 55576894 - MGP_WSBEiJ_P0064672 Ptpn3 protein_coding protein_coding MGP_WSBEiJ_T0064673.1 MGP_WSBEiJ_G0027533.1 mouse_genomes_project 4 55489663 55493372 - Ptpn3 protein_coding processed_transcript MGP_WSBEiJ_T0064674.1 MGP_WSBEiJ_G0027533.1 mouse_genomes_project 4 55517555 55575432 - MGP_WSBEiJ_P0064674 Ptpn3 protein_coding protein_coding MGP_WSBEiJ_T0064675.1 MGP_WSBEiJ_G0027533.1 mouse_genomes_project 4 55527454 55575972 - Ptpn3 protein_coding processed_transcript MGP_WSBEiJ_T0064676.1 MGP_WSBEiJ_G0027533.1 mouse_genomes_project 4 55537640 55576564 - MGP_WSBEiJ_P0064676 Ptpn3 protein_coding protein_coding MGP_WSBEiJ_T0064677.1 MGP_WSBEiJ_G0027533.1 mouse_genomes_project 4 55542676 55575813 - MGP_WSBEiJ_P0064677 Ptpn3 protein_coding protein_coding MGP_WSBEiJ_T0007691.1 MGP_WSBEiJ_G0006289.1 mouse_genomes_project 4 16577700 16580857 - Gm12354 lincRNA lincRNA MGP_WSBEiJ_T0007692.1 MGP_WSBEiJ_G0006289.1 mouse_genomes_project 4 16577700 16581170 - Gm12354 lincRNA lincRNA MGP_WSBEiJ_T0007768.1 MGP_WSBEiJ_G0006355.1 mouse_genomes_project 4 88535898 88577072 - Gm12606 lincRNA lincRNA MGP_WSBEiJ_T0067884.1 MGP_WSBEiJ_G0028260.1 mouse_genomes_project 4 143208805 143213648 - MGP_WSBEiJ_P0067884 Slc25a34 protein_coding protein_coding MGP_WSBEiJ_T0014107.1 MGP_WSBEiJ_G0012237.1 mouse_genomes_project 4 37574409 37574827 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014019.1 MGP_WSBEiJ_G0012149.1 mouse_genomes_project 4 11512543 11512774 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017468.1 MGP_WSBEiJ_G0014975.1 mouse_genomes_project 4 88400748 88428950 - Gm12602 processed_transcript processed_transcript MGP_WSBEiJ_T0017469.1 MGP_WSBEiJ_G0014975.1 mouse_genomes_project 4 88423782 88428905 - Gm12602 processed_transcript processed_transcript MGP_WSBEiJ_T0065156.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90578688 90701427 - MGP_WSBEiJ_P0065156 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065157.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90578688 90701407 - MGP_WSBEiJ_P0065157 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065158.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90578688 90701442 - MGP_WSBEiJ_P0065158 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065159.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90578688 90730205 - MGP_WSBEiJ_P0065159 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065160.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90581008 90582511 - Elavl2 protein_coding retained_intron MGP_WSBEiJ_T0065161.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90581168 90639466 - MGP_WSBEiJ_P0065161 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065162.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90581168 90641225 - MGP_WSBEiJ_P0065162 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065163.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90586590 90705728 - Elavl2 protein_coding retained_intron MGP_WSBEiJ_T0065164.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90591985 90685407 - MGP_WSBEiJ_P0065164 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065165.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90636499 90702439 - MGP_WSBEiJ_P0065165 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065166.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90636593 90701329 - MGP_WSBEiJ_P0065166 Elavl2 protein_coding protein_coding MGP_WSBEiJ_T0065167.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90709847 90730197 - Elavl2 protein_coding processed_transcript MGP_WSBEiJ_T0065168.1 MGP_WSBEiJ_G0027657.1 mouse_genomes_project 4 90730115 90731975 - Elavl2 protein_coding processed_transcript MGP_WSBEiJ_T0067119.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433180 133491045 + MGP_WSBEiJ_P0067119 Eya3 protein_coding protein_coding MGP_WSBEiJ_T0067120.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433239 133518594 + MGP_WSBEiJ_P0067120 Eya3 protein_coding protein_coding MGP_WSBEiJ_T0067121.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433249 133518591 + MGP_WSBEiJ_P0067121 Eya3 protein_coding protein_coding MGP_WSBEiJ_T0067122.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433251 133496485 + Eya3 protein_coding processed_transcript MGP_WSBEiJ_T0067123.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433257 133489257 + Eya3 protein_coding processed_transcript MGP_WSBEiJ_T0067124.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433257 133518600 + MGP_WSBEiJ_P0067124 Eya3 protein_coding protein_coding MGP_WSBEiJ_T0067125.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433272 133515963 + Eya3 protein_coding processed_transcript MGP_WSBEiJ_T0067126.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433278 133517305 + Eya3 protein_coding processed_transcript MGP_WSBEiJ_T0067127.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133433310 133491230 + Eya3 protein_coding processed_transcript MGP_WSBEiJ_T0067128.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133453511 133517271 + Eya3 protein_coding processed_transcript MGP_WSBEiJ_T0067129.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133498418 133507769 + Eya3 protein_coding processed_transcript MGP_WSBEiJ_T0067130.1 MGP_WSBEiJ_G0028085.1 mouse_genomes_project 4 133501773 133515474 + Eya3 protein_coding processed_transcript MGP_WSBEiJ_T0066188.1 MGP_WSBEiJ_G0027868.1 mouse_genomes_project 4 117838604 117841994 - MGP_WSBEiJ_P0066188 Dph2 protein_coding protein_coding MGP_WSBEiJ_T0066189.1 MGP_WSBEiJ_G0027868.1 mouse_genomes_project 4 117838868 117841982 - Dph2 protein_coding retained_intron MGP_WSBEiJ_T0066190.1 MGP_WSBEiJ_G0027868.1 mouse_genomes_project 4 117838877 117841985 - MGP_WSBEiJ_P0066190 Dph2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066191.1 MGP_WSBEiJ_G0027868.1 mouse_genomes_project 4 117841039 117841948 - Dph2 protein_coding retained_intron MGP_WSBEiJ_T0063691.1 MGP_WSBEiJ_G0027310.1 mouse_genomes_project 4 16139554 16373556 + MGP_WSBEiJ_P0063691 Cngb3 protein_coding protein_coding MGP_WSBEiJ_T0068611.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158239516 158242820 - Mib2 protein_coding processed_transcript MGP_WSBEiJ_T0068612.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158239521 158251946 - Mib2 protein_coding processed_transcript MGP_WSBEiJ_T0068613.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158239521 158254036 - MGP_WSBEiJ_P0068613 Mib2 protein_coding protein_coding MGP_WSBEiJ_T0068614.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158239522 158241568 - Mib2 protein_coding processed_transcript MGP_WSBEiJ_T0068615.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158240677 158241568 - Mib2 protein_coding processed_transcript MGP_WSBEiJ_T0068616.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158241783 158244425 - MGP_WSBEiJ_P0068616 Mib2 protein_coding protein_coding MGP_WSBEiJ_T0068617.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158242464 158243180 - Mib2 protein_coding processed_transcript MGP_WSBEiJ_T0068618.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158246160 158254035 - Mib2 protein_coding processed_transcript MGP_WSBEiJ_T0068619.1 MGP_WSBEiJ_G0028415.1 mouse_genomes_project 4 158251883 158254031 - Mib2 protein_coding processed_transcript MGP_WSBEiJ_T0017437.1 MGP_WSBEiJ_G0014955.1 mouse_genomes_project 4 8678237 8705855 + 1700123M08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017438.1 MGP_WSBEiJ_G0014955.1 mouse_genomes_project 4 8678246 8705570 + 1700123M08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017439.1 MGP_WSBEiJ_G0014955.1 mouse_genomes_project 4 8691842 8693342 + 1700123M08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0100824.1 MGP_WSBEiJ_G0039282.1 mouse_genomes_project 4 95607435 95625913 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004390.1 MGP_WSBEiJ_G0003825.1 mouse_genomes_project 4 82393884 82406233 - Gm11413 antisense antisense MGP_WSBEiJ_T0065092.1 MGP_WSBEiJ_G0027628.1 mouse_genomes_project 4 86021947 86024751 - MGP_WSBEiJ_P0065092 Rps6 protein_coding protein_coding MGP_WSBEiJ_T0065093.1 MGP_WSBEiJ_G0027628.1 mouse_genomes_project 4 86022091 86024684 - Rps6 protein_coding processed_transcript MGP_WSBEiJ_T0014098.1 MGP_WSBEiJ_G0012228.1 mouse_genomes_project 4 35298820 35308737 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004442.1 MGP_WSBEiJ_G0003860.1 mouse_genomes_project 4 119166106 119166816 - Gm12867 antisense antisense MGP_WSBEiJ_T0004422.1 MGP_WSBEiJ_G0003844.1 mouse_genomes_project 4 107629382 107632331 - Lrp8os1 antisense antisense MGP_WSBEiJ_T0004423.1 MGP_WSBEiJ_G0003844.1 mouse_genomes_project 4 107629403 107632331 - Lrp8os1 antisense antisense MGP_WSBEiJ_T0011379.1 MGP_WSBEiJ_G0009536.1 mouse_genomes_project 4 114669516 114669614 + Gm24045 misc_RNA misc_RNA MGP_WSBEiJ_T0014070.1 MGP_WSBEiJ_G0012200.1 mouse_genomes_project 4 25648522 25648786 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017465.1 MGP_WSBEiJ_G0014972.1 mouse_genomes_project 4 70920338 70934331 + C630043F03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0014148.1 MGP_WSBEiJ_G0012278.1 mouse_genomes_project 4 53447365 53447608 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063622.1 MGP_WSBEiJ_G0027289.1 mouse_genomes_project 4 8464980 8531338 + MGP_WSBEiJ_P0063622 Cdh17 protein_coding protein_coding MGP_WSBEiJ_T0063623.1 MGP_WSBEiJ_G0027289.1 mouse_genomes_project 4 8465026 8522466 + MGP_WSBEiJ_P0063623 Cdh17 protein_coding protein_coding MGP_WSBEiJ_T0067793.1 MGP_WSBEiJ_G0028242.1 mouse_genomes_project 4 142548678 142554092 + MGP_WSBEiJ_P0067793 Mfap2 protein_coding protein_coding MGP_WSBEiJ_T0067794.1 MGP_WSBEiJ_G0028242.1 mouse_genomes_project 4 142548894 142553290 + Mfap2 protein_coding processed_transcript MGP_WSBEiJ_T0067795.1 MGP_WSBEiJ_G0028242.1 mouse_genomes_project 4 142548901 142554262 + MGP_WSBEiJ_P0067795 Mfap2 protein_coding protein_coding MGP_WSBEiJ_T0064638.1 MGP_WSBEiJ_G0027526.1 mouse_genomes_project 4 54987133 54988646 + MGP_WSBEiJ_P0064638 Actl7a protein_coding protein_coding MGP_WSBEiJ_T0068698.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532523 158547939 + MGP_WSBEiJ_P0068698 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068699.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532523 158549441 + MGP_WSBEiJ_P0068699 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068700.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532542 158549440 + MGP_WSBEiJ_P0068700 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068701.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532553 158539138 + MGP_WSBEiJ_P0068701 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068702.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532556 158541535 + Ube2j2 protein_coding processed_transcript MGP_WSBEiJ_T0068703.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532561 158547939 + MGP_WSBEiJ_P0068703 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068704.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532602 158547324 + MGP_WSBEiJ_P0068704 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068705.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532684 158547793 + MGP_WSBEiJ_P0068705 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068706.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532692 158541699 + Ube2j2 protein_coding retained_intron MGP_WSBEiJ_T0068707.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532858 158547939 + MGP_WSBEiJ_P0068707 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068708.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158532858 158547942 + MGP_WSBEiJ_P0068708 Ube2j2 protein_coding protein_coding MGP_WSBEiJ_T0068709.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158545270 158546619 + Ube2j2 protein_coding retained_intron MGP_WSBEiJ_T0068710.1 MGP_WSBEiJ_G0028433.1 mouse_genomes_project 4 158546223 158547710 + Ube2j2 protein_coding processed_transcript MGP_WSBEiJ_T0004461.1 MGP_WSBEiJ_G0003875.1 mouse_genomes_project 4 129561498 129566273 + Gm15904 antisense antisense MGP_WSBEiJ_T0064556.1 MGP_WSBEiJ_G0027499.1 mouse_genomes_project 4 47526684 47541731 - MGP_WSBEiJ_P0064556 Mrpl50 protein_coding protein_coding MGP_WSBEiJ_T0066036.1 MGP_WSBEiJ_G0027841.1 mouse_genomes_project 4 116579151 116585225 - MGP_WSBEiJ_P0066036 Mmachc protein_coding protein_coding MGP_WSBEiJ_T0066037.1 MGP_WSBEiJ_G0027841.1 mouse_genomes_project 4 116581261 116585107 - Mmachc protein_coding processed_transcript MGP_WSBEiJ_T0014246.1 MGP_WSBEiJ_G0012376.1 mouse_genomes_project 4 94392686 94393131 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014043.1 MGP_WSBEiJ_G0012173.1 mouse_genomes_project 4 18851388 18852816 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098233.1 MGP_WSBEiJ_G0036896.1 mouse_genomes_project 4 6358354 6358517 - Gm24152 snRNA snRNA MGP_WSBEiJ_T0010444.1 MGP_WSBEiJ_G0008601.1 mouse_genomes_project 4 119165593 119165659 + Mir1957a miRNA miRNA MGP_WSBEiJ_T0014277.1 MGP_WSBEiJ_G0012407.1 mouse_genomes_project 4 105861598 105863266 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100844.1 MGP_WSBEiJ_G0039302.1 mouse_genomes_project 4 145133350 145134420 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0013990.1 MGP_WSBEiJ_G0012120.1 mouse_genomes_project 4 299897 300497 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067015.1 MGP_WSBEiJ_G0028065.1 mouse_genomes_project 4 131594515 131603904 + MGP_WSBEiJ_P0067015 Matn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0067016.1 MGP_WSBEiJ_G0028065.1 mouse_genomes_project 4 131595493 131604853 + MGP_WSBEiJ_P0067016 Matn1 protein_coding protein_coding MGP_WSBEiJ_T0067313.1 MGP_WSBEiJ_G0028126.1 mouse_genomes_project 4 135189176 135190588 + MGP_WSBEiJ_P0067313 E130218I03Rik protein_coding protein_coding MGP_WSBEiJ_T0067314.1 MGP_WSBEiJ_G0028126.1 mouse_genomes_project 4 135189277 135191388 + MGP_WSBEiJ_P0067314 E130218I03Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067315.1 MGP_WSBEiJ_G0028126.1 mouse_genomes_project 4 135189277 135191384 + MGP_WSBEiJ_P0067315 E130218I03Rik protein_coding protein_coding MGP_WSBEiJ_T0067316.1 MGP_WSBEiJ_G0028126.1 mouse_genomes_project 4 135189290 135190504 + MGP_WSBEiJ_P0067316 E130218I03Rik protein_coding protein_coding MGP_WSBEiJ_T0067317.1 MGP_WSBEiJ_G0028126.1 mouse_genomes_project 4 135189290 135190827 + MGP_WSBEiJ_P0067317 E130218I03Rik protein_coding protein_coding MGP_WSBEiJ_T0067318.1 MGP_WSBEiJ_G0028126.1 mouse_genomes_project 4 135189291 135191067 + MGP_WSBEiJ_P0067318 E130218I03Rik protein_coding protein_coding MGP_WSBEiJ_T0067319.1 MGP_WSBEiJ_G0028126.1 mouse_genomes_project 4 135189292 135191034 + MGP_WSBEiJ_P0067319 E130218I03Rik protein_coding protein_coding MGP_WSBEiJ_T0067320.1 MGP_WSBEiJ_G0028126.1 mouse_genomes_project 4 135189497 135190792 + E130218I03Rik protein_coding processed_transcript MGP_WSBEiJ_T0066354.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119600736 119641288 + MGP_WSBEiJ_P0066354 Foxj3 protein_coding protein_coding MGP_WSBEiJ_T0066355.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119603397 119701797 + MGP_WSBEiJ_P0066355 Foxj3 protein_coding protein_coding MGP_WSBEiJ_T0066356.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119603421 119656396 + MGP_WSBEiJ_P0066356 Foxj3 protein_coding protein_coding MGP_WSBEiJ_T0066357.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119603424 119701631 + MGP_WSBEiJ_P0066357 Foxj3 protein_coding protein_coding MGP_WSBEiJ_T0066358.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119603428 119674258 + Foxj3 protein_coding retained_intron MGP_WSBEiJ_T0066359.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119603434 119656405 + MGP_WSBEiJ_P0066359 Foxj3 protein_coding protein_coding MGP_WSBEiJ_T0066360.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119603449 119629179 + Foxj3 protein_coding retained_intron MGP_WSBEiJ_T0066361.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119603521 119641315 + MGP_WSBEiJ_P0066361 Foxj3 protein_coding protein_coding MGP_WSBEiJ_T0066362.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119604267 119641416 + MGP_WSBEiJ_P0066362 Foxj3 protein_coding protein_coding MGP_WSBEiJ_T0066363.1 MGP_WSBEiJ_G0027911.1 mouse_genomes_project 4 119692427 119694498 + Foxj3 protein_coding processed_transcript MGP_WSBEiJ_T0007874.1 MGP_WSBEiJ_G0006432.1 mouse_genomes_project 4 138316307 138322310 - Gm13003 lincRNA lincRNA MGP_WSBEiJ_T0066974.1 MGP_WSBEiJ_G0028056.1 mouse_genomes_project 4 131025943 131048970 - MGP_WSBEiJ_P0066974 Serinc2 protein_coding protein_coding MGP_WSBEiJ_T0066975.1 MGP_WSBEiJ_G0028056.1 mouse_genomes_project 4 131025943 131048602 - MGP_WSBEiJ_P0066975 Serinc2 protein_coding protein_coding MGP_WSBEiJ_T0066976.1 MGP_WSBEiJ_G0028056.1 mouse_genomes_project 4 131026350 131052570 - MGP_WSBEiJ_P0066976 Serinc2 protein_coding protein_coding MGP_WSBEiJ_T0066977.1 MGP_WSBEiJ_G0028056.1 mouse_genomes_project 4 131036393 131048916 - MGP_WSBEiJ_P0066977 Serinc2 protein_coding protein_coding MGP_WSBEiJ_T0066978.1 MGP_WSBEiJ_G0028056.1 mouse_genomes_project 4 131037008 131048929 - MGP_WSBEiJ_P0066978 Serinc2 protein_coding protein_coding MGP_WSBEiJ_T0004474.1 MGP_WSBEiJ_G0003885.1 mouse_genomes_project 4 136162139 136162998 - Gm16224 antisense antisense MGP_WSBEiJ_T0064548.1 MGP_WSBEiJ_G0027495.1 mouse_genomes_project 4 47041357 47191288 + Plppr1 protein_coding retained_intron MGP_WSBEiJ_T0064549.1 MGP_WSBEiJ_G0027495.1 mouse_genomes_project 4 47041366 47330480 + MGP_WSBEiJ_P0064549 Plppr1 protein_coding protein_coding MGP_WSBEiJ_T0064550.1 MGP_WSBEiJ_G0027495.1 mouse_genomes_project 4 47041566 47290173 + Plppr1 protein_coding retained_intron MGP_WSBEiJ_T0014097.1 MGP_WSBEiJ_G0012227.1 mouse_genomes_project 4 34614290 34614758 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065190.1 MGP_WSBEiJ_G0027666.1 mouse_genomes_project 4 94257547 94272570 - MGP_WSBEiJ_P0065190 Eqtn protein_coding protein_coding MGP_WSBEiJ_T0065191.1 MGP_WSBEiJ_G0027666.1 mouse_genomes_project 4 94257711 94272521 - MGP_WSBEiJ_P0065191 Eqtn protein_coding protein_coding MGP_WSBEiJ_T0064795.1 MGP_WSBEiJ_G0027568.1 mouse_genomes_project 4 60934463 60954599 - MGP_WSBEiJ_P0064795 Wdr31 protein_coding protein_coding MGP_WSBEiJ_T0064796.1 MGP_WSBEiJ_G0027568.1 mouse_genomes_project 4 60935465 60954599 - MGP_WSBEiJ_P0064796 Wdr31 protein_coding protein_coding MGP_WSBEiJ_T0064797.1 MGP_WSBEiJ_G0027568.1 mouse_genomes_project 4 60935465 60942995 - MGP_WSBEiJ_P0064797 Wdr31 protein_coding protein_coding MGP_WSBEiJ_T0064798.1 MGP_WSBEiJ_G0027568.1 mouse_genomes_project 4 60935465 60954599 - MGP_WSBEiJ_P0064798 Wdr31 protein_coding protein_coding MGP_WSBEiJ_T0064799.1 MGP_WSBEiJ_G0027568.1 mouse_genomes_project 4 60939372 60941106 - Wdr31 protein_coding retained_intron MGP_WSBEiJ_T0064800.1 MGP_WSBEiJ_G0027568.1 mouse_genomes_project 4 60940218 60943436 - Wdr31 protein_coding retained_intron MGP_WSBEiJ_T0064801.1 MGP_WSBEiJ_G0027568.1 mouse_genomes_project 4 60945930 60954608 - MGP_WSBEiJ_P0064801 Wdr31 protein_coding protein_coding MGP_WSBEiJ_T0064802.1 MGP_WSBEiJ_G0027568.1 mouse_genomes_project 4 60946585 60954586 - MGP_WSBEiJ_P0064802 Wdr31 protein_coding protein_coding MGP_WSBEiJ_T0068509.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157504839 157532674 - MGP_WSBEiJ_P0068509 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068510.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157504850 157517916 - Plch2 protein_coding retained_intron MGP_WSBEiJ_T0068511.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157505091 157541150 - MGP_WSBEiJ_P0068511 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068512.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157505091 157528697 - MGP_WSBEiJ_P0068512 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068513.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157505091 157511542 - MGP_WSBEiJ_P0068513 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068514.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157505097 157514374 - Plch2 protein_coding retained_intron MGP_WSBEiJ_T0068515.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157505101 157532674 - MGP_WSBEiJ_P0068515 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068516.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157505386 157567373 - MGP_WSBEiJ_P0068516 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068517.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157507423 157578980 - MGP_WSBEiJ_P0068517 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068518.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157519895 157532674 - MGP_WSBEiJ_P0068518 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068519.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157528760 157581067 - MGP_WSBEiJ_P0068519 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0068520.1 MGP_WSBEiJ_G0028400.1 mouse_genomes_project 4 157530766 157541146 - MGP_WSBEiJ_P0068520 Plch2 protein_coding protein_coding MGP_WSBEiJ_T0007748.1 MGP_WSBEiJ_G0006338.1 mouse_genomes_project 4 62657460 62667318 + Gm11216 lincRNA lincRNA MGP_WSBEiJ_T0068404.1 MGP_WSBEiJ_G0028380.1 mouse_genomes_project 4 156420740 156425903 + MGP_WSBEiJ_P0068404 A430005L14Rik protein_coding protein_coding MGP_WSBEiJ_T0068405.1 MGP_WSBEiJ_G0028380.1 mouse_genomes_project 4 156420740 156425896 + MGP_WSBEiJ_P0068405 A430005L14Rik protein_coding protein_coding MGP_WSBEiJ_T0068406.1 MGP_WSBEiJ_G0028380.1 mouse_genomes_project 4 156420758 156424041 + A430005L14Rik protein_coding retained_intron MGP_WSBEiJ_T0068407.1 MGP_WSBEiJ_G0028380.1 mouse_genomes_project 4 156420769 156425489 + MGP_WSBEiJ_P0068407 A430005L14Rik protein_coding protein_coding MGP_WSBEiJ_T0068408.1 MGP_WSBEiJ_G0028380.1 mouse_genomes_project 4 156420769 156425781 + MGP_WSBEiJ_P0068408 A430005L14Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068409.1 MGP_WSBEiJ_G0028380.1 mouse_genomes_project 4 156420832 156424709 + A430005L14Rik protein_coding processed_transcript MGP_WSBEiJ_T0068410.1 MGP_WSBEiJ_G0028380.1 mouse_genomes_project 4 156423766 156425064 + A430005L14Rik protein_coding retained_intron MGP_WSBEiJ_T0065029.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83308091 83716610 - MGP_WSBEiJ_P0065029 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065030.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83308225 83716643 - MGP_WSBEiJ_P0065030 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065031.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83308348 83716851 - MGP_WSBEiJ_P0065031 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065032.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83308376 83324716 - MGP_WSBEiJ_P0065032 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065033.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83308602 83716662 - MGP_WSBEiJ_P0065033 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065034.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83309151 83324889 - MGP_WSBEiJ_P0065034 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065035.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83309237 83325105 - MGP_WSBEiJ_P0065035 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065036.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83309436 83324827 - MGP_WSBEiJ_P0065036 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065037.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83309436 83324827 - MGP_WSBEiJ_P0065037 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065038.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83326172 83716572 - MGP_WSBEiJ_P0065038 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065039.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83326172 83716572 - MGP_WSBEiJ_P0065039 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065040.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83326196 83544430 - Bnc2 protein_coding processed_transcript MGP_WSBEiJ_T0065041.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83326535 83716603 - MGP_WSBEiJ_P0065041 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065042.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83326562 83716573 - MGP_WSBEiJ_P0065042 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065043.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83326593 83569708 - Bnc2 protein_coding processed_transcript MGP_WSBEiJ_T0065044.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83424438 83716575 - Bnc2 protein_coding retained_intron MGP_WSBEiJ_T0065045.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83426677 83716573 - MGP_WSBEiJ_P0065045 Bnc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0065046.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83426709 83582930 - Bnc2 protein_coding processed_transcript MGP_WSBEiJ_T0065047.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83426802 83716654 - MGP_WSBEiJ_P0065047 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065048.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83446664 83582601 - MGP_WSBEiJ_P0065048 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0065049.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83446689 83560207 - Bnc2 protein_coding processed_transcript MGP_WSBEiJ_T0065050.1 MGP_WSBEiJ_G0027619.1 mouse_genomes_project 4 83582522 83716575 - MGP_WSBEiJ_P0065050 Bnc2 protein_coding protein_coding MGP_WSBEiJ_T0063898.1 MGP_WSBEiJ_G0027360.1 mouse_genomes_project 4 32008079 32022295 - MGP_WSBEiJ_P0063898 Gm136 protein_coding protein_coding MGP_WSBEiJ_T0065970.1 MGP_WSBEiJ_G0027829.1 mouse_genomes_project 4 115972726 115985382 - MGP_WSBEiJ_P0065970 Lurap1 protein_coding protein_coding MGP_WSBEiJ_T0065973.1 MGP_WSBEiJ_G0027829.1 mouse_genomes_project 4 115978341 115993645 - Lurap1 protein_coding processed_transcript MGP_WSBEiJ_T0097175.1 MGP_WSBEiJ_G0035856.1 mouse_genomes_project 4 41142286 41142557 - Rmrp ribozyme ribozyme MGP_WSBEiJ_T0064008.1 MGP_WSBEiJ_G0027389.1 mouse_genomes_project 4 38869592 38916544 + MGP_WSBEiJ_P0064008 Ubap1 protein_coding protein_coding MGP_WSBEiJ_T0064009.1 MGP_WSBEiJ_G0027389.1 mouse_genomes_project 4 38869592 38915614 + MGP_WSBEiJ_P0064009 Ubap1 protein_coding protein_coding MGP_WSBEiJ_T0064010.1 MGP_WSBEiJ_G0027389.1 mouse_genomes_project 4 38869644 38894819 + Ubap1 protein_coding processed_transcript MGP_WSBEiJ_T0064011.1 MGP_WSBEiJ_G0027389.1 mouse_genomes_project 4 38894781 38903843 + Ubap1 protein_coding processed_transcript MGP_WSBEiJ_T0064012.1 MGP_WSBEiJ_G0027389.1 mouse_genomes_project 4 38895258 38914540 + MGP_WSBEiJ_P0064012 Ubap1 protein_coding protein_coding MGP_WSBEiJ_T0066181.1 MGP_WSBEiJ_G0027867.1 mouse_genomes_project 4 117834284 117837198 - MGP_WSBEiJ_P0066181 Atp6v0b protein_coding protein_coding MGP_WSBEiJ_T0066182.1 MGP_WSBEiJ_G0027867.1 mouse_genomes_project 4 117834290 117835855 - Atp6v0b protein_coding retained_intron MGP_WSBEiJ_T0066183.1 MGP_WSBEiJ_G0027867.1 mouse_genomes_project 4 117834405 117835761 - Atp6v0b protein_coding retained_intron MGP_WSBEiJ_T0066184.1 MGP_WSBEiJ_G0027867.1 mouse_genomes_project 4 117835124 117836597 - Atp6v0b protein_coding retained_intron MGP_WSBEiJ_T0066185.1 MGP_WSBEiJ_G0027867.1 mouse_genomes_project 4 117835191 117836519 - MGP_WSBEiJ_P0066185 Atp6v0b protein_coding protein_coding MGP_WSBEiJ_T0066186.1 MGP_WSBEiJ_G0027867.1 mouse_genomes_project 4 117835595 117837249 - MGP_WSBEiJ_P0066186 Atp6v0b protein_coding protein_coding MGP_WSBEiJ_T0066187.1 MGP_WSBEiJ_G0027867.1 mouse_genomes_project 4 117836241 117837295 - MGP_WSBEiJ_P0066187 Atp6v0b protein_coding protein_coding MGP_WSBEiJ_T0100811.1 MGP_WSBEiJ_G0039269.1 mouse_genomes_project 4 61867121 61870558 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100813.1 MGP_WSBEiJ_G0039271.1 mouse_genomes_project 4 85786222 85793192 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004412.1 MGP_WSBEiJ_G0003837.1 mouse_genomes_project 4 102608400 102618422 - BB031773 antisense antisense MGP_WSBEiJ_T0100827.1 MGP_WSBEiJ_G0039285.1 mouse_genomes_project 4 112103470 112119014 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0066477.1 MGP_WSBEiJ_G0027947.1 mouse_genomes_project 4 123514446 123541667 + protein_coding processed_transcript MGP_WSBEiJ_T0066478.1 MGP_WSBEiJ_G0027947.1 mouse_genomes_project 4 123537728 123553899 + MGP_WSBEiJ_P0066478 protein_coding protein_coding MGP_WSBEiJ_T0066479.1 MGP_WSBEiJ_G0027947.1 mouse_genomes_project 4 123537735 123553806 + MGP_WSBEiJ_P0066479 protein_coding protein_coding MGP_WSBEiJ_T0066480.1 MGP_WSBEiJ_G0027947.1 mouse_genomes_project 4 123537748 123553796 + MGP_WSBEiJ_P0066480 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066481.1 MGP_WSBEiJ_G0027947.1 mouse_genomes_project 4 123537816 123553806 + MGP_WSBEiJ_P0066481 protein_coding protein_coding MGP_WSBEiJ_T0066482.1 MGP_WSBEiJ_G0027947.1 mouse_genomes_project 4 123538000 123553806 + MGP_WSBEiJ_P0066482 protein_coding protein_coding MGP_WSBEiJ_T0066483.1 MGP_WSBEiJ_G0027947.1 mouse_genomes_project 4 123549645 123552980 + protein_coding processed_transcript MGP_WSBEiJ_T0066484.1 MGP_WSBEiJ_G0027947.1 mouse_genomes_project 4 123552153 123553806 + protein_coding retained_intron MGP_WSBEiJ_T0011369.1 MGP_WSBEiJ_G0009526.1 mouse_genomes_project 4 52854630 52854919 + Gm24628 misc_RNA misc_RNA MGP_WSBEiJ_T0064080.1 MGP_WSBEiJ_G0027409.1 mouse_genomes_project 4 40422645 40423268 + MGP_WSBEiJ_P0064080 Gm10931 protein_coding protein_coding MGP_WSBEiJ_T0067364.1 MGP_WSBEiJ_G0028138.1 mouse_genomes_project 4 135509142 135526172 - MGP_WSBEiJ_P0067364 Sepn1 protein_coding protein_coding MGP_WSBEiJ_T0067365.1 MGP_WSBEiJ_G0028138.1 mouse_genomes_project 4 135510829 135512280 - Sepn1 protein_coding processed_transcript MGP_WSBEiJ_T0007704.1 MGP_WSBEiJ_G0006301.1 mouse_genomes_project 4 31383350 31388424 + Gm12753 lincRNA lincRNA MGP_WSBEiJ_T0064554.1 MGP_WSBEiJ_G0027498.1 mouse_genomes_project 4 47503660 47520693 - MGP_WSBEiJ_P0064554 Baat protein_coding protein_coding MGP_WSBEiJ_T0064555.1 MGP_WSBEiJ_G0027498.1 mouse_genomes_project 4 47504058 47517300 - MGP_WSBEiJ_P0064555 Baat protein_coding protein_coding MGP_WSBEiJ_T0066060.1 MGP_WSBEiJ_G0027845.1 mouse_genomes_project 4 116691203 116703169 + MGP_WSBEiJ_P0066060 Mutyh protein_coding protein_coding MGP_WSBEiJ_T0066061.1 MGP_WSBEiJ_G0027845.1 mouse_genomes_project 4 116691205 116699387 + MGP_WSBEiJ_P0066061 Mutyh protein_coding protein_coding MGP_WSBEiJ_T0066062.1 MGP_WSBEiJ_G0027845.1 mouse_genomes_project 4 116691218 116703176 + Mutyh protein_coding retained_intron MGP_WSBEiJ_T0066063.1 MGP_WSBEiJ_G0027845.1 mouse_genomes_project 4 116691228 116702514 + Mutyh protein_coding retained_intron MGP_WSBEiJ_T0066064.1 MGP_WSBEiJ_G0027845.1 mouse_genomes_project 4 116697626 116703121 + MGP_WSBEiJ_P0066064 Mutyh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066065.1 MGP_WSBEiJ_G0027845.1 mouse_genomes_project 4 116697684 116700774 + Mutyh protein_coding retained_intron MGP_WSBEiJ_T0066066.1 MGP_WSBEiJ_G0027845.1 mouse_genomes_project 4 116701432 116703178 + Mutyh protein_coding retained_intron MGP_WSBEiJ_T0066511.1 MGP_WSBEiJ_G0027954.1 mouse_genomes_project 4 124206221 124212404 + MGP_WSBEiJ_P0066511 Mycbp protein_coding protein_coding MGP_WSBEiJ_T0066512.1 MGP_WSBEiJ_G0027954.1 mouse_genomes_project 4 124206311 124215570 + MGP_WSBEiJ_P0066512 Mycbp protein_coding protein_coding MGP_WSBEiJ_T0066513.1 MGP_WSBEiJ_G0027954.1 mouse_genomes_project 4 124206348 124211058 + Mycbp protein_coding processed_transcript MGP_WSBEiJ_T0066514.1 MGP_WSBEiJ_G0027954.1 mouse_genomes_project 4 124206443 124212570 + Mycbp protein_coding processed_transcript MGP_WSBEiJ_T0007772.1 MGP_WSBEiJ_G0006359.1 mouse_genomes_project 4 91856482 91878301 + Gm12637 lincRNA lincRNA MGP_WSBEiJ_T0098255.1 MGP_WSBEiJ_G0036918.1 mouse_genomes_project 4 49916453 49916618 - Gm22042 snRNA snRNA MGP_WSBEiJ_T0099550.1 MGP_WSBEiJ_G0038213.1 mouse_genomes_project 4 109417465 109417596 + Gm22497 snoRNA snoRNA MGP_WSBEiJ_T0004361.1 MGP_WSBEiJ_G0003799.1 mouse_genomes_project 4 37726863 37728249 + antisense antisense MGP_WSBEiJ_T0100834.1 MGP_WSBEiJ_G0039292.1 mouse_genomes_project 4 118678599 118679514 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014005.1 MGP_WSBEiJ_G0012135.1 mouse_genomes_project 4 6608309 6609232 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014251.1 MGP_WSBEiJ_G0012381.1 mouse_genomes_project 4 97633759 97634305 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004433.1 MGP_WSBEiJ_G0003852.1 mouse_genomes_project 4 116708610 116714917 + Gm12996 antisense antisense MGP_WSBEiJ_T0063999.1 MGP_WSBEiJ_G0027387.1 mouse_genomes_project 4 38707042 38790502 - MGP_WSBEiJ_P0063999 Ubap2 protein_coding protein_coding MGP_WSBEiJ_T0064000.1 MGP_WSBEiJ_G0027387.1 mouse_genomes_project 4 38707045 38790493 - MGP_WSBEiJ_P0064000 Ubap2 protein_coding protein_coding MGP_WSBEiJ_T0064001.1 MGP_WSBEiJ_G0027387.1 mouse_genomes_project 4 38707904 38708477 - MGP_WSBEiJ_P0064001 Ubap2 protein_coding protein_coding MGP_WSBEiJ_T0064002.1 MGP_WSBEiJ_G0027387.1 mouse_genomes_project 4 38711930 38712790 - Ubap2 protein_coding processed_transcript MGP_WSBEiJ_T0064003.1 MGP_WSBEiJ_G0027387.1 mouse_genomes_project 4 38720581 38727509 - MGP_WSBEiJ_P0064003 Ubap2 protein_coding protein_coding MGP_WSBEiJ_T0064004.1 MGP_WSBEiJ_G0027387.1 mouse_genomes_project 4 38735277 38766110 - MGP_WSBEiJ_P0064004 Ubap2 protein_coding protein_coding MGP_WSBEiJ_T0064005.1 MGP_WSBEiJ_G0027387.1 mouse_genomes_project 4 38735280 38790471 - Ubap2 protein_coding processed_transcript MGP_WSBEiJ_T0064006.1 MGP_WSBEiJ_G0027387.1 mouse_genomes_project 4 38789426 38790485 - Ubap2 protein_coding processed_transcript MGP_WSBEiJ_T0001369.1 MGP_WSBEiJ_G0001298.1 mouse_genomes_project 4 2991467 2991742 + TEC TEC MGP_WSBEiJ_T0007710.1 MGP_WSBEiJ_G0006307.1 mouse_genomes_project 4 38160274 38162523 - Gm6297 lincRNA lincRNA MGP_WSBEiJ_T0007683.1 MGP_WSBEiJ_G0006281.1 mouse_genomes_project 4 8003321 8028928 + Gm26663 lincRNA lincRNA MGP_WSBEiJ_T0065098.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86163536 86441012 - MGP_WSBEiJ_P0065098 Slc24a2 protein_coding protein_coding MGP_WSBEiJ_T0065099.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86163541 86438500 - MGP_WSBEiJ_P0065099 Slc24a2 protein_coding protein_coding MGP_WSBEiJ_T0065100.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86174972 86438410 - MGP_WSBEiJ_P0065100 Slc24a2 protein_coding protein_coding MGP_WSBEiJ_T0065101.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86174972 86438414 - MGP_WSBEiJ_P0065101 Slc24a2 protein_coding protein_coding MGP_WSBEiJ_T0065102.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86179966 86197671 - Slc24a2 protein_coding processed_transcript MGP_WSBEiJ_T0065103.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86216377 86383968 - MGP_WSBEiJ_P0065103 Slc24a2 protein_coding protein_coding MGP_WSBEiJ_T0065104.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86262396 86440958 - Slc24a2 protein_coding processed_transcript MGP_WSBEiJ_T0065105.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86262784 86440957 - Slc24a2 protein_coding processed_transcript MGP_WSBEiJ_T0065106.1 MGP_WSBEiJ_G0027630.1 mouse_genomes_project 4 86383467 86441002 - Slc24a2 protein_coding processed_transcript MGP_WSBEiJ_T0004543.1 MGP_WSBEiJ_G0003936.1 mouse_genomes_project 4 158435957 158436644 - Mxra8os antisense antisense MGP_WSBEiJ_T0014296.1 MGP_WSBEiJ_G0012426.1 mouse_genomes_project 4 111754365 111755361 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011368.1 MGP_WSBEiJ_G0009525.1 mouse_genomes_project 4 52634811 52635053 + Gm25687 misc_RNA misc_RNA MGP_WSBEiJ_T0007875.1 MGP_WSBEiJ_G0006433.1 mouse_genomes_project 4 138551579 138552696 - 2810405F17Rik lincRNA lincRNA MGP_WSBEiJ_T0066131.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117199074 117217037 - MGP_WSBEiJ_P0066131 Rnf220 protein_coding protein_coding MGP_WSBEiJ_T0066132.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117199082 117450880 - MGP_WSBEiJ_P0066132 Rnf220 protein_coding protein_coding MGP_WSBEiJ_T0066133.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117199546 117317167 - MGP_WSBEiJ_P0066133 Rnf220 protein_coding protein_coding MGP_WSBEiJ_T0066134.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117204139 117213095 - Rnf220 protein_coding processed_transcript MGP_WSBEiJ_T0066135.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117205047 117217440 - MGP_WSBEiJ_P0066135 Rnf220 protein_coding protein_coding MGP_WSBEiJ_T0066136.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117212712 117217052 - Rnf220 protein_coding processed_transcript MGP_WSBEiJ_T0066137.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117212999 117216731 - Rnf220 protein_coding processed_transcript MGP_WSBEiJ_T0066138.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117213509 117227615 - Rnf220 protein_coding processed_transcript MGP_WSBEiJ_T0066139.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117235241 117450777 - Rnf220 protein_coding processed_transcript MGP_WSBEiJ_T0066140.1 MGP_WSBEiJ_G0027859.1 mouse_genomes_project 4 117444049 117448834 - Rnf220 protein_coding processed_transcript MGP_WSBEiJ_T0067970.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146771532 147011772 - MGP_WSBEiJ_P0067970 Vps13d protein_coding protein_coding MGP_WSBEiJ_T0067971.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146771537 147007425 - MGP_WSBEiJ_P0067971 Vps13d protein_coding protein_coding MGP_WSBEiJ_T0067972.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146771537 146894533 - MGP_WSBEiJ_P0067972 Vps13d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067973.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146773485 146969323 - MGP_WSBEiJ_P0067973 Vps13d protein_coding protein_coding MGP_WSBEiJ_T0067974.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146773815 146783954 - Vps13d protein_coding processed_transcript MGP_WSBEiJ_T0067975.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146779196 146855614 - Vps13d protein_coding retained_intron MGP_WSBEiJ_T0067976.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146816882 146852503 - Vps13d protein_coding processed_transcript MGP_WSBEiJ_T0067977.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146854450 146859689 - Vps13d protein_coding retained_intron MGP_WSBEiJ_T0067978.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146871457 146874093 - Vps13d protein_coding retained_intron MGP_WSBEiJ_T0067979.1 MGP_WSBEiJ_G0028297.1 mouse_genomes_project 4 146990706 147011762 - Vps13d protein_coding retained_intron MGP_WSBEiJ_T0010414.1 MGP_WSBEiJ_G0008571.1 mouse_genomes_project 4 38308468 38308573 - Gm25931 miRNA miRNA MGP_WSBEiJ_T0064735.1 MGP_WSBEiJ_G0027550.1 mouse_genomes_project 4 57423353 57493550 - MGP_WSBEiJ_P0064735 AI481877 protein_coding protein_coding MGP_WSBEiJ_T0064736.1 MGP_WSBEiJ_G0027550.1 mouse_genomes_project 4 57461306 57490858 - AI481877 protein_coding retained_intron MGP_WSBEiJ_T0001387.1 MGP_WSBEiJ_G0001316.1 mouse_genomes_project 4 137768056 137770514 + TEC TEC MGP_WSBEiJ_T0067600.1 MGP_WSBEiJ_G0028194.1 mouse_genomes_project 4 138983623 139042358 - MGP_WSBEiJ_P0067600 Alpl protein_coding protein_coding MGP_WSBEiJ_T0067601.1 MGP_WSBEiJ_G0028194.1 mouse_genomes_project 4 138988340 138989068 - Alpl protein_coding processed_transcript MGP_WSBEiJ_T0067602.1 MGP_WSBEiJ_G0028194.1 mouse_genomes_project 4 138994434 139010746 - MGP_WSBEiJ_P0067602 Alpl protein_coding protein_coding MGP_WSBEiJ_T0067603.1 MGP_WSBEiJ_G0028194.1 mouse_genomes_project 4 138997594 139026742 - MGP_WSBEiJ_P0067603 Alpl protein_coding protein_coding MGP_WSBEiJ_T0067604.1 MGP_WSBEiJ_G0028194.1 mouse_genomes_project 4 138998811 139029919 - MGP_WSBEiJ_P0067604 Alpl protein_coding protein_coding MGP_WSBEiJ_T0067605.1 MGP_WSBEiJ_G0028194.1 mouse_genomes_project 4 138999355 139040725 - Alpl protein_coding processed_transcript MGP_WSBEiJ_T0067606.1 MGP_WSBEiJ_G0028194.1 mouse_genomes_project 4 139002392 139013985 - Alpl protein_coding processed_transcript MGP_WSBEiJ_T0067607.1 MGP_WSBEiJ_G0028194.1 mouse_genomes_project 4 139002392 139014190 - Alpl protein_coding processed_transcript MGP_WSBEiJ_T0067178.1 MGP_WSBEiJ_G0028098.1 mouse_genomes_project 4 134086146 134098189 + MGP_WSBEiJ_P0067178 Map3k6 protein_coding protein_coding MGP_WSBEiJ_T0067179.1 MGP_WSBEiJ_G0028098.1 mouse_genomes_project 4 134092496 134093345 + Map3k6 protein_coding processed_transcript MGP_WSBEiJ_T0067180.1 MGP_WSBEiJ_G0028098.1 mouse_genomes_project 4 134092572 134093373 + Map3k6 protein_coding processed_transcript MGP_WSBEiJ_T0067181.1 MGP_WSBEiJ_G0028098.1 mouse_genomes_project 4 134096107 134098188 + Map3k6 protein_coding processed_transcript MGP_WSBEiJ_T0066345.1 MGP_WSBEiJ_G0027908.1 mouse_genomes_project 4 119474824 119509303 + MGP_WSBEiJ_P0066345 Zmynd12 protein_coding protein_coding MGP_WSBEiJ_T0066346.1 MGP_WSBEiJ_G0027908.1 mouse_genomes_project 4 119474882 119505635 + Zmynd12 protein_coding processed_transcript MGP_WSBEiJ_T0066347.1 MGP_WSBEiJ_G0027908.1 mouse_genomes_project 4 119500154 119525095 + Zmynd12 protein_coding processed_transcript MGP_WSBEiJ_T0065671.1 MGP_WSBEiJ_G0027763.1 mouse_genomes_project 4 108008117 108048063 - MGP_WSBEiJ_P0065671 Zyg11a protein_coding protein_coding MGP_WSBEiJ_T0065672.1 MGP_WSBEiJ_G0027763.1 mouse_genomes_project 4 108008313 108048063 - MGP_WSBEiJ_P0065672 Zyg11a protein_coding protein_coding MGP_WSBEiJ_T0014152.1 MGP_WSBEiJ_G0012282.1 mouse_genomes_project 4 54380597 54380913 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066202.1 MGP_WSBEiJ_G0027871.1 mouse_genomes_project 4 117882740 118100338 - MGP_WSBEiJ_P0066202 St3gal3 protein_coding protein_coding MGP_WSBEiJ_T0066203.1 MGP_WSBEiJ_G0027871.1 mouse_genomes_project 4 117882744 118100362 - MGP_WSBEiJ_P0066203 St3gal3 protein_coding protein_coding MGP_WSBEiJ_T0066204.1 MGP_WSBEiJ_G0027871.1 mouse_genomes_project 4 117882746 118100330 - MGP_WSBEiJ_P0066204 St3gal3 protein_coding protein_coding MGP_WSBEiJ_T0066205.1 MGP_WSBEiJ_G0027871.1 mouse_genomes_project 4 117892150 117988509 - MGP_WSBEiJ_P0066205 St3gal3 protein_coding protein_coding MGP_WSBEiJ_T0066206.1 MGP_WSBEiJ_G0027871.1 mouse_genomes_project 4 117892242 117920674 - MGP_WSBEiJ_P0066206 St3gal3 protein_coding protein_coding MGP_WSBEiJ_T0066249.1 MGP_WSBEiJ_G0027880.1 mouse_genomes_project 4 118517018 118519876 + MGP_WSBEiJ_P0066249 2610528J11Rik protein_coding protein_coding MGP_WSBEiJ_T0066250.1 MGP_WSBEiJ_G0027880.1 mouse_genomes_project 4 118517262 118520249 + MGP_WSBEiJ_P0066250 2610528J11Rik protein_coding protein_coding MGP_WSBEiJ_T0014351.1 MGP_WSBEiJ_G0012481.1 mouse_genomes_project 4 127678123 127678333 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017510.1 MGP_WSBEiJ_G0015000.1 mouse_genomes_project 4 133113566 133119198 - Snhg3 processed_transcript processed_transcript MGP_WSBEiJ_T0017511.1 MGP_WSBEiJ_G0015000.1 mouse_genomes_project 4 133117467 133119221 - Snhg3 processed_transcript processed_transcript MGP_WSBEiJ_T0017512.1 MGP_WSBEiJ_G0015000.1 mouse_genomes_project 4 133117468 133118468 - Snhg3 processed_transcript processed_transcript MGP_WSBEiJ_T0017513.1 MGP_WSBEiJ_G0015000.1 mouse_genomes_project 4 133117468 133119168 - Snhg3 processed_transcript processed_transcript MGP_WSBEiJ_T0017514.1 MGP_WSBEiJ_G0015000.1 mouse_genomes_project 4 133117538 133118871 - Snhg3 processed_transcript processed_transcript MGP_WSBEiJ_T0004386.1 MGP_WSBEiJ_G0003821.1 mouse_genomes_project 4 70883607 70884289 + Gm11250 antisense antisense MGP_WSBEiJ_T0004504.1 MGP_WSBEiJ_G0003908.1 mouse_genomes_project 4 146196544 146197978 + Pramef12os antisense antisense MGP_WSBEiJ_T0014150.1 MGP_WSBEiJ_G0012280.1 mouse_genomes_project 4 53584035 53584387 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014117.1 MGP_WSBEiJ_G0012247.1 mouse_genomes_project 4 43587770 43588098 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066052.1 MGP_WSBEiJ_G0027844.1 mouse_genomes_project 4 116677266 116691029 - MGP_WSBEiJ_P0066052 Toe1 protein_coding protein_coding MGP_WSBEiJ_T0066053.1 MGP_WSBEiJ_G0027844.1 mouse_genomes_project 4 116687482 116691121 - MGP_WSBEiJ_P0066053 Toe1 protein_coding protein_coding MGP_WSBEiJ_T0066054.1 MGP_WSBEiJ_G0027844.1 mouse_genomes_project 4 116687492 116688673 - Toe1 protein_coding processed_transcript MGP_WSBEiJ_T0066055.1 MGP_WSBEiJ_G0027844.1 mouse_genomes_project 4 116688154 116689086 - Toe1 protein_coding retained_intron MGP_WSBEiJ_T0066056.1 MGP_WSBEiJ_G0027844.1 mouse_genomes_project 4 116688262 116690004 - MGP_WSBEiJ_P0066056 Toe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066057.1 MGP_WSBEiJ_G0027844.1 mouse_genomes_project 4 116688756 116690081 - Toe1 protein_coding retained_intron MGP_WSBEiJ_T0066058.1 MGP_WSBEiJ_G0027844.1 mouse_genomes_project 4 116689191 116691087 - Toe1 protein_coding processed_transcript MGP_WSBEiJ_T0066059.1 MGP_WSBEiJ_G0027844.1 mouse_genomes_project 4 116689297 116691029 - Toe1 protein_coding retained_intron MGP_WSBEiJ_T0067455.1 MGP_WSBEiJ_G0028158.1 mouse_genomes_project 4 136941014 136943946 - MGP_WSBEiJ_P0067455 Pnrc2 protein_coding protein_coding MGP_WSBEiJ_T0067456.1 MGP_WSBEiJ_G0028158.1 mouse_genomes_project 4 136942419 136943666 - MGP_WSBEiJ_P0067456 Pnrc2 protein_coding protein_coding MGP_WSBEiJ_T0067457.1 MGP_WSBEiJ_G0028158.1 mouse_genomes_project 4 136942546 136943157 - MGP_WSBEiJ_P0067457 Pnrc2 protein_coding protein_coding MGP_WSBEiJ_T0010449.1 MGP_WSBEiJ_G0008606.1 mouse_genomes_project 4 123899908 123900010 + Mir6398 miRNA miRNA MGP_WSBEiJ_T0017494.1 MGP_WSBEiJ_G0014994.1 mouse_genomes_project 4 123190261 123192424 + 4933421A08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0068357.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154661499 154673087 - MGP_WSBEiJ_P0068357 Rnf207 protein_coding protein_coding MGP_WSBEiJ_T0068358.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154661791 154663460 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0068359.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154665815 154672937 - MGP_WSBEiJ_P0068359 Rnf207 protein_coding protein_coding MGP_WSBEiJ_T0068360.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154665992 154667839 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0068361.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154666151 154667784 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0068362.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154667269 154667836 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0068363.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154667828 154672960 - MGP_WSBEiJ_P0068363 Rnf207 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068364.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154667838 154670444 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0068365.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154668988 154673472 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0068366.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154668990 154673098 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0068367.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154669335 154673104 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0068368.1 MGP_WSBEiJ_G0028374.1 mouse_genomes_project 4 154669939 154670807 - Rnf207 protein_coding retained_intron MGP_WSBEiJ_T0014168.1 MGP_WSBEiJ_G0012298.1 mouse_genomes_project 4 65012512 65012850 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063695.1 MGP_WSBEiJ_G0027312.1 mouse_genomes_project 4 16438134 16462833 + MGP_WSBEiJ_P0063695 Rmdn1 protein_coding protein_coding MGP_WSBEiJ_T0063696.1 MGP_WSBEiJ_G0027312.1 mouse_genomes_project 4 16438179 16470718 + MGP_WSBEiJ_P0063696 Rmdn1 protein_coding protein_coding MGP_WSBEiJ_T0007762.1 MGP_WSBEiJ_G0006350.1 mouse_genomes_project 4 83065809 83068650 - 6030471H07Rik lincRNA lincRNA MGP_WSBEiJ_T0067851.1 MGP_WSBEiJ_G0028254.1 mouse_genomes_project 4 142990627 142995132 + MGP_WSBEiJ_P0067851 Hspb7 protein_coding protein_coding MGP_WSBEiJ_T0014301.1 MGP_WSBEiJ_G0012431.1 mouse_genomes_project 4 115204745 115205070 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097394.1 MGP_WSBEiJ_G0036068.1 mouse_genomes_project 4 108362129 108365173 + Gm12737 sense_intronic sense_intronic MGP_WSBEiJ_T0066986.1 MGP_WSBEiJ_G0028060.1 mouse_genomes_project 4 131134573 131165941 + MGP_WSBEiJ_P0066986 Snrnp40 protein_coding protein_coding MGP_WSBEiJ_T0066987.1 MGP_WSBEiJ_G0028060.1 mouse_genomes_project 4 131134635 131150306 + Snrnp40 protein_coding processed_transcript MGP_WSBEiJ_T0066988.1 MGP_WSBEiJ_G0028060.1 mouse_genomes_project 4 131137289 131140112 + Snrnp40 protein_coding processed_transcript MGP_WSBEiJ_T0066989.1 MGP_WSBEiJ_G0028060.1 mouse_genomes_project 4 131159764 131164550 + Snrnp40 protein_coding processed_transcript MGP_WSBEiJ_T0100830.1 MGP_WSBEiJ_G0039288.1 mouse_genomes_project 4 114826173 114848079 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014380.1 MGP_WSBEiJ_G0012510.1 mouse_genomes_project 4 142628876 142629691 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014096.1 MGP_WSBEiJ_G0012226.1 mouse_genomes_project 4 33783300 33784106 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098310.1 MGP_WSBEiJ_G0036973.1 mouse_genomes_project 4 142459123 142459239 + Gm26226 snRNA snRNA MGP_WSBEiJ_T0014084.1 MGP_WSBEiJ_G0012214.1 mouse_genomes_project 4 30230039 30230486 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004446.1 MGP_WSBEiJ_G0003864.1 mouse_genomes_project 4 123336657 123337640 - antisense antisense MGP_WSBEiJ_T0065368.1 MGP_WSBEiJ_G0027706.1 mouse_genomes_project 4 101198907 101211301 + MGP_WSBEiJ_P0065368 Leprot protein_coding protein_coding MGP_WSBEiJ_T0065369.1 MGP_WSBEiJ_G0027706.1 mouse_genomes_project 4 101198982 101211301 + MGP_WSBEiJ_P0065369 Leprot protein_coding protein_coding MGP_WSBEiJ_T0014175.1 MGP_WSBEiJ_G0012305.1 mouse_genomes_project 4 68551439 68552177 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068758.1 MGP_WSBEiJ_G0028447.1 mouse_genomes_project 4 158848323 158861358 + MGP_WSBEiJ_P0068758 Noc2l protein_coding protein_coding MGP_WSBEiJ_T0068759.1 MGP_WSBEiJ_G0028447.1 mouse_genomes_project 4 158848364 158861345 + MGP_WSBEiJ_P0068759 Noc2l protein_coding protein_coding MGP_WSBEiJ_T0064768.1 MGP_WSBEiJ_G0027558.1 mouse_genomes_project 4 58332781 58342721 - MGP_WSBEiJ_P0064768 Slc46a2 protein_coding protein_coding MGP_WSBEiJ_T0064727.1 MGP_WSBEiJ_G0027546.1 mouse_genomes_project 4 57345207 57366873 - MGP_WSBEiJ_P0064727 Ptgr1 protein_coding protein_coding MGP_WSBEiJ_T0014292.1 MGP_WSBEiJ_G0012422.1 mouse_genomes_project 4 109643660 109644064 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064876.1 MGP_WSBEiJ_G0027585.1 mouse_genomes_project 4 62162890 62179723 - MGP_WSBEiJ_P0064876 1700018C11Rik protein_coding protein_coding MGP_WSBEiJ_T0064877.1 MGP_WSBEiJ_G0027585.1 mouse_genomes_project 4 62162890 62179735 - MGP_WSBEiJ_P0064877 1700018C11Rik protein_coding protein_coding MGP_WSBEiJ_T0098278.1 MGP_WSBEiJ_G0036941.1 mouse_genomes_project 4 108344366 108344469 + Gm23138 snRNA snRNA MGP_WSBEiJ_T0007903.1 MGP_WSBEiJ_G0006460.1 mouse_genomes_project 4 155629755 155630175 + Gm13174 lincRNA lincRNA MGP_WSBEiJ_T0066609.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126613919 126659972 - MGP_WSBEiJ_P0066609 Thrap3 protein_coding protein_coding MGP_WSBEiJ_T0066610.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126617246 126617792 - Thrap3 protein_coding processed_transcript MGP_WSBEiJ_T0066611.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126617246 126629475 - MGP_WSBEiJ_P0066611 Thrap3 protein_coding protein_coding MGP_WSBEiJ_T0066612.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126617363 126623842 - MGP_WSBEiJ_P0066612 Thrap3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066613.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126629393 126632716 - MGP_WSBEiJ_P0066613 Thrap3 protein_coding protein_coding MGP_WSBEiJ_T0066614.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126635839 126649959 - MGP_WSBEiJ_P0066614 Thrap3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0066615.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126635976 126658353 - MGP_WSBEiJ_P0066615 Thrap3 protein_coding protein_coding MGP_WSBEiJ_T0066616.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126635985 126659801 - MGP_WSBEiJ_P0066616 Thrap3 protein_coding protein_coding MGP_WSBEiJ_T0066617.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126641656 126659835 - Thrap3 protein_coding retained_intron MGP_WSBEiJ_T0066618.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126641837 126659871 - Thrap3 protein_coding retained_intron MGP_WSBEiJ_T0066619.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126642075 126659859 - MGP_WSBEiJ_P0066619 Thrap3 protein_coding protein_coding MGP_WSBEiJ_T0066620.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126642081 126659588 - MGP_WSBEiJ_P0066620 Thrap3 protein_coding protein_coding MGP_WSBEiJ_T0066621.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126642087 126659602 - MGP_WSBEiJ_P0066621 Thrap3 protein_coding protein_coding MGP_WSBEiJ_T0066622.1 MGP_WSBEiJ_G0027983.1 mouse_genomes_project 4 126649486 126659882 - Thrap3 protein_coding processed_transcript MGP_WSBEiJ_T0065345.1 MGP_WSBEiJ_G0027702.1 mouse_genomes_project 4 100594989 100679296 + MGP_WSBEiJ_P0065345 Raver2 protein_coding protein_coding MGP_WSBEiJ_T0065346.1 MGP_WSBEiJ_G0027702.1 mouse_genomes_project 4 100594989 100662259 + MGP_WSBEiJ_P0065346 Raver2 protein_coding protein_coding MGP_WSBEiJ_T0065347.1 MGP_WSBEiJ_G0027702.1 mouse_genomes_project 4 100595485 100633340 + Raver2 protein_coding processed_transcript MGP_WSBEiJ_T0017447.1 MGP_WSBEiJ_G0014961.1 mouse_genomes_project 4 30504484 30513928 - Gm11934 processed_transcript processed_transcript MGP_WSBEiJ_T0098283.1 MGP_WSBEiJ_G0036946.1 mouse_genomes_project 4 116548063 116548173 + Gm25137 snRNA snRNA MGP_WSBEiJ_T0014279.1 MGP_WSBEiJ_G0012409.1 mouse_genomes_project 4 106523026 106523240 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065915.1 MGP_WSBEiJ_G0027818.1 mouse_genomes_project 4 115644541 115652626 + MGP_WSBEiJ_P0065915 Mob3c protein_coding protein_coding MGP_WSBEiJ_T0065916.1 MGP_WSBEiJ_G0027818.1 mouse_genomes_project 4 115644546 115648155 + Mob3c protein_coding retained_intron MGP_WSBEiJ_T0065917.1 MGP_WSBEiJ_G0027818.1 mouse_genomes_project 4 115645107 115647985 + MGP_WSBEiJ_P0065917 Mob3c protein_coding protein_coding MGP_WSBEiJ_T0065060.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85170033 85545171 + MGP_WSBEiJ_P0065060 Adamtsl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0065061.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85170495 85204213 + Adamtsl1 protein_coding retained_intron MGP_WSBEiJ_T0065062.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85170495 85547605 + MGP_WSBEiJ_P0065062 Adamtsl1 protein_coding protein_coding MGP_WSBEiJ_T0065063.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85170503 85373592 + MGP_WSBEiJ_P0065063 Adamtsl1 protein_coding protein_coding MGP_WSBEiJ_T0065064.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85170508 85547608 + MGP_WSBEiJ_P0065064 Adamtsl1 protein_coding protein_coding MGP_WSBEiJ_T0065065.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85170555 85319902 + MGP_WSBEiJ_P0065065 Adamtsl1 protein_coding protein_coding MGP_WSBEiJ_T0065066.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85170600 85354955 + Adamtsl1 protein_coding retained_intron MGP_WSBEiJ_T0065067.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85204050 85228727 + Adamtsl1 protein_coding retained_intron MGP_WSBEiJ_T0065068.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85319523 85368752 + MGP_WSBEiJ_P0065068 Adamtsl1 protein_coding protein_coding MGP_WSBEiJ_T0065069.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85390779 85391393 + Adamtsl1 protein_coding processed_transcript MGP_WSBEiJ_T0065070.1 MGP_WSBEiJ_G0027622.1 mouse_genomes_project 4 85391056 85547605 + Adamtsl1 protein_coding retained_intron MGP_WSBEiJ_T0014238.1 MGP_WSBEiJ_G0012368.1 mouse_genomes_project 4 92309510 92310003 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0063498.1 MGP_WSBEiJ_G0027266.1 mouse_genomes_project 4 2812567 2844725 + MGP_WSBEiJ_P0063498 Ubxn2b protein_coding protein_coding MGP_WSBEiJ_T0066437.1 MGP_WSBEiJ_G0027935.1 mouse_genomes_project 4 122905481 122920689 + MGP_WSBEiJ_P0066437 9530002B09Rik protein_coding protein_coding MGP_WSBEiJ_T0007738.1 MGP_WSBEiJ_G0006330.1 mouse_genomes_project 4 55645282 55648663 - 1700042G15Rik lincRNA lincRNA MGP_WSBEiJ_T0007739.1 MGP_WSBEiJ_G0006330.1 mouse_genomes_project 4 55645606 55648682 - 1700042G15Rik lincRNA lincRNA MGP_WSBEiJ_T0007740.1 MGP_WSBEiJ_G0006330.1 mouse_genomes_project 4 55645708 55648642 - 1700042G15Rik lincRNA lincRNA MGP_WSBEiJ_T0007715.1 MGP_WSBEiJ_G0006312.1 mouse_genomes_project 4 43445548 43447915 + lincRNA lincRNA MGP_WSBEiJ_T0068724.1 MGP_WSBEiJ_G0028438.1 mouse_genomes_project 4 158625974 158628706 + MGP_WSBEiJ_P0068724 Tnfrsf18 protein_coding protein_coding MGP_WSBEiJ_T0068725.1 MGP_WSBEiJ_G0028438.1 mouse_genomes_project 4 158626142 158628702 + Tnfrsf18 protein_coding retained_intron MGP_WSBEiJ_T0068726.1 MGP_WSBEiJ_G0028438.1 mouse_genomes_project 4 158626152 158628702 + MGP_WSBEiJ_P0068726 Tnfrsf18 protein_coding protein_coding MGP_WSBEiJ_T0068727.1 MGP_WSBEiJ_G0028438.1 mouse_genomes_project 4 158626152 158628702 + MGP_WSBEiJ_P0068727 Tnfrsf18 protein_coding protein_coding MGP_WSBEiJ_T0068728.1 MGP_WSBEiJ_G0028438.1 mouse_genomes_project 4 158626188 158628182 + Tnfrsf18 protein_coding processed_transcript MGP_WSBEiJ_T0068729.1 MGP_WSBEiJ_G0028438.1 mouse_genomes_project 4 158628178 158628706 + Tnfrsf18 protein_coding processed_transcript MGP_WSBEiJ_T0010399.1 MGP_WSBEiJ_G0008556.1 mouse_genomes_project 4 7519074 7519181 + n-TSaga9 miRNA miRNA MGP_WSBEiJ_T0010450.1 MGP_WSBEiJ_G0008607.1 mouse_genomes_project 4 125083872 125083981 + Mir697 miRNA miRNA MGP_WSBEiJ_T0066431.1 MGP_WSBEiJ_G0027931.1 mouse_genomes_project 4 121307612 121345119 - MGP_WSBEiJ_P0066431 Rlf protein_coding protein_coding MGP_WSBEiJ_T0066432.1 MGP_WSBEiJ_G0027931.1 mouse_genomes_project 4 121308123 121372613 - MGP_WSBEiJ_P0066432 Rlf protein_coding protein_coding MGP_WSBEiJ_T0066433.1 MGP_WSBEiJ_G0027931.1 mouse_genomes_project 4 121333268 121345119 - MGP_WSBEiJ_P0066433 Rlf protein_coding protein_coding MGP_WSBEiJ_T0068663.1 MGP_WSBEiJ_G0028427.1 mouse_genomes_project 4 158444592 158456508 + MGP_WSBEiJ_P0068663 Dvl1 protein_coding protein_coding MGP_WSBEiJ_T0068664.1 MGP_WSBEiJ_G0028427.1 mouse_genomes_project 4 158444651 158456083 + MGP_WSBEiJ_P0068664 Dvl1 protein_coding protein_coding MGP_WSBEiJ_T0068665.1 MGP_WSBEiJ_G0028427.1 mouse_genomes_project 4 158444656 158456507 + Dvl1 protein_coding retained_intron MGP_WSBEiJ_T0068666.1 MGP_WSBEiJ_G0028427.1 mouse_genomes_project 4 158444756 158456508 + Dvl1 protein_coding retained_intron MGP_WSBEiJ_T0068667.1 MGP_WSBEiJ_G0028427.1 mouse_genomes_project 4 158444776 158456508 + Dvl1 protein_coding retained_intron MGP_WSBEiJ_T0068668.1 MGP_WSBEiJ_G0028427.1 mouse_genomes_project 4 158444861 158456508 + Dvl1 protein_coding retained_intron MGP_WSBEiJ_T0068669.1 MGP_WSBEiJ_G0028427.1 mouse_genomes_project 4 158450612 158451154 + Dvl1 protein_coding processed_transcript MGP_WSBEiJ_T0068670.1 MGP_WSBEiJ_G0028427.1 mouse_genomes_project 4 158451773 158453437 + Dvl1 protein_coding retained_intron MGP_WSBEiJ_T0068238.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153135152 153152000 - MGP_WSBEiJ_P0068238 Park7 protein_coding protein_coding MGP_WSBEiJ_T0068239.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153135152 153147541 - MGP_WSBEiJ_P0068239 Park7 protein_coding protein_coding MGP_WSBEiJ_T0068240.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153135164 153147241 - MGP_WSBEiJ_P0068240 Park7 protein_coding protein_coding MGP_WSBEiJ_T0068241.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153135255 153146022 - MGP_WSBEiJ_P0068241 Park7 protein_coding protein_coding MGP_WSBEiJ_T0068242.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153135258 153147266 - MGP_WSBEiJ_P0068242 Park7 protein_coding protein_coding MGP_WSBEiJ_T0068243.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153135403 153139885 - Park7 protein_coding processed_transcript MGP_WSBEiJ_T0068244.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153139055 153147098 - MGP_WSBEiJ_P0068244 Park7 protein_coding protein_coding MGP_WSBEiJ_T0068245.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153141613 153147443 - Park7 protein_coding retained_intron MGP_WSBEiJ_T0068246.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153142728 153147483 - MGP_WSBEiJ_P0068246 Park7 protein_coding protein_coding MGP_WSBEiJ_T0068247.1 MGP_WSBEiJ_G0028352.1 mouse_genomes_project 4 153142852 153151769 - MGP_WSBEiJ_P0068247 Park7 protein_coding protein_coding MGP_WSBEiJ_T0068042.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150177221 150186887 - MGP_WSBEiJ_P0068042 Fbxo44 protein_coding protein_coding MGP_WSBEiJ_T0068043.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150177224 150187375 - MGP_WSBEiJ_P0068043 Fbxo44 protein_coding protein_coding MGP_WSBEiJ_T0068044.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150177224 150187386 - MGP_WSBEiJ_P0068044 Fbxo44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068045.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150177688 150187168 - MGP_WSBEiJ_P0068045 Fbxo44 protein_coding protein_coding MGP_WSBEiJ_T0068046.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150177958 150184808 - MGP_WSBEiJ_P0068046 Fbxo44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068047.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150177993 150187166 - MGP_WSBEiJ_P0068047 Fbxo44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068048.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150179928 150187142 - MGP_WSBEiJ_P0068048 Fbxo44 protein_coding protein_coding MGP_WSBEiJ_T0068049.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150180578 150187140 - MGP_WSBEiJ_P0068049 Fbxo44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068050.1 MGP_WSBEiJ_G0028315.1 mouse_genomes_project 4 150180598 150187774 - MGP_WSBEiJ_P0068050 Fbxo44 protein_coding protein_coding MGP_WSBEiJ_T0010434.1 MGP_WSBEiJ_G0008591.1 mouse_genomes_project 4 94033078 94033159 + Mir872 miRNA miRNA MGP_WSBEiJ_T0013989.1 MGP_WSBEiJ_G0012119.1 mouse_genomes_project 4 21668 22188 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014360.1 MGP_WSBEiJ_G0012490.1 mouse_genomes_project 4 134128837 134129292 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0065567.1 MGP_WSBEiJ_G0027749.1 mouse_genomes_project 4 107032128 107060869 + MGP_WSBEiJ_P0065567 Hspb11 protein_coding protein_coding MGP_WSBEiJ_T0065568.1 MGP_WSBEiJ_G0027749.1 mouse_genomes_project 4 107032438 107060970 + MGP_WSBEiJ_P0065568 Hspb11 protein_coding protein_coding MGP_WSBEiJ_T0065569.1 MGP_WSBEiJ_G0027749.1 mouse_genomes_project 4 107032460 107060960 + MGP_WSBEiJ_P0065569 Hspb11 protein_coding protein_coding MGP_WSBEiJ_T0065570.1 MGP_WSBEiJ_G0027749.1 mouse_genomes_project 4 107040850 107060964 + Hspb11 protein_coding processed_transcript MGP_WSBEiJ_T0065423.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102721464 102722979 + Mier1 protein_coding processed_transcript MGP_WSBEiJ_T0065424.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102721469 102772897 + MGP_WSBEiJ_P0065424 Mier1 protein_coding protein_coding MGP_WSBEiJ_T0065425.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102721505 102738103 + Mier1 protein_coding processed_transcript MGP_WSBEiJ_T0065426.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102721539 102750305 + Mier1 protein_coding processed_transcript MGP_WSBEiJ_T0065427.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102721836 102725377 + MGP_WSBEiJ_P0065427 Mier1 protein_coding protein_coding MGP_WSBEiJ_T0065428.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102722030 102725741 + Mier1 protein_coding processed_transcript MGP_WSBEiJ_T0065429.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102722346 102734380 + MGP_WSBEiJ_P0065429 Mier1 protein_coding protein_coding MGP_WSBEiJ_T0065430.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102722634 102772892 + MGP_WSBEiJ_P0065430 Mier1 protein_coding protein_coding MGP_WSBEiJ_T0065431.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102722712 102772892 + MGP_WSBEiJ_P0065431 Mier1 protein_coding protein_coding MGP_WSBEiJ_T0065432.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102724369 102725665 + Mier1 protein_coding processed_transcript MGP_WSBEiJ_T0065433.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102726360 102772895 + MGP_WSBEiJ_P0065433 Mier1 protein_coding protein_coding MGP_WSBEiJ_T0065434.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102726464 102749685 + Mier1 protein_coding retained_intron MGP_WSBEiJ_T0065435.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102726484 102751558 + Mier1 protein_coding retained_intron MGP_WSBEiJ_T0065436.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102750168 102769888 + MGP_WSBEiJ_P0065436 Mier1 protein_coding protein_coding MGP_WSBEiJ_T0065437.1 MGP_WSBEiJ_G0027717.1 mouse_genomes_project 4 102765689 102769957 + Mier1 protein_coding processed_transcript MGP_WSBEiJ_T0067401.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136358226 136391440 - MGP_WSBEiJ_P0067401 Srrm1 protein_coding protein_coding MGP_WSBEiJ_T0067402.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136358233 136391363 - MGP_WSBEiJ_P0067402 Srrm1 protein_coding protein_coding MGP_WSBEiJ_T0067403.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136358837 136391363 - MGP_WSBEiJ_P0067403 Srrm1 protein_coding protein_coding MGP_WSBEiJ_T0067404.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136359776 136391255 - MGP_WSBEiJ_P0067404 Srrm1 protein_coding protein_coding MGP_WSBEiJ_T0067405.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136360031 136364946 - MGP_WSBEiJ_P0067405 Srrm1 protein_coding protein_coding MGP_WSBEiJ_T0067406.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136360217 136391253 - Srrm1 protein_coding retained_intron MGP_WSBEiJ_T0067407.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136361521 136362604 - Srrm1 protein_coding retained_intron MGP_WSBEiJ_T0067408.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136366892 136369967 - Srrm1 protein_coding retained_intron MGP_WSBEiJ_T0067409.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136369197 136375821 - Srrm1 protein_coding retained_intron MGP_WSBEiJ_T0067410.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136369891 136380798 - MGP_WSBEiJ_P0067410 Srrm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067411.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136376016 136380854 - Srrm1 protein_coding retained_intron MGP_WSBEiJ_T0067412.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136380746 136391261 - MGP_WSBEiJ_P0067412 Srrm1 protein_coding protein_coding MGP_WSBEiJ_T0067413.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136381970 136391270 - Srrm1 protein_coding retained_intron MGP_WSBEiJ_T0067414.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136382861 136385538 - MGP_WSBEiJ_P0067414 Srrm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0067415.1 MGP_WSBEiJ_G0028148.1 mouse_genomes_project 4 136384025 136391321 - Srrm1 protein_coding processed_transcript MGP_WSBEiJ_T0065154.1 MGP_WSBEiJ_G0027656.1 mouse_genomes_project 4 89502999 89509864 + MGP_WSBEiJ_P0065154 Zfp352 protein_coding protein_coding MGP_WSBEiJ_T0065155.1 MGP_WSBEiJ_G0027656.1 mouse_genomes_project 4 89507775 89509431 + MGP_WSBEiJ_P0065155 Zfp352 protein_coding protein_coding MGP_WSBEiJ_T0064714.1 MGP_WSBEiJ_G0027543.1 mouse_genomes_project 4 57142632 57143574 - MGP_WSBEiJ_P0064714 Olfr267 protein_coding protein_coding MGP_WSBEiJ_T0063534.1 MGP_WSBEiJ_G0027274.1 mouse_genomes_project 4 5934690 5947703 + Clvs1 protein_coding processed_transcript MGP_WSBEiJ_T0063535.1 MGP_WSBEiJ_G0027274.1 mouse_genomes_project 4 5934714 6023464 + Clvs1 protein_coding processed_transcript MGP_WSBEiJ_T0063536.1 MGP_WSBEiJ_G0027274.1 mouse_genomes_project 4 5934714 6122238 + MGP_WSBEiJ_P0063536 Clvs1 protein_coding protein_coding MGP_WSBEiJ_T0063537.1 MGP_WSBEiJ_G0027274.1 mouse_genomes_project 4 5934727 5947701 + Clvs1 protein_coding processed_transcript MGP_WSBEiJ_T0063538.1 MGP_WSBEiJ_G0027274.1 mouse_genomes_project 4 5934744 5946863 + Clvs1 protein_coding processed_transcript MGP_WSBEiJ_T0063539.1 MGP_WSBEiJ_G0027274.1 mouse_genomes_project 4 5936842 6122238 + MGP_WSBEiJ_P0063539 Clvs1 protein_coding protein_coding MGP_WSBEiJ_T0063540.1 MGP_WSBEiJ_G0027274.1 mouse_genomes_project 4 5978029 6101208 + Clvs1 protein_coding processed_transcript MGP_WSBEiJ_T0063541.1 MGP_WSBEiJ_G0027274.1 mouse_genomes_project 4 6004831 6101245 + Clvs1 protein_coding processed_transcript MGP_WSBEiJ_T0067249.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134889185 134922646 - MGP_WSBEiJ_P0067249 Dhdds protein_coding protein_coding MGP_WSBEiJ_T0067250.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134889214 134922643 - MGP_WSBEiJ_P0067250 Dhdds protein_coding protein_coding MGP_WSBEiJ_T0067251.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134889215 134901967 - Dhdds protein_coding processed_transcript MGP_WSBEiJ_T0067252.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134889220 134922149 - Dhdds protein_coding processed_transcript MGP_WSBEiJ_T0067253.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134889332 134922627 - Dhdds protein_coding processed_transcript MGP_WSBEiJ_T0067254.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134890349 134922627 - MGP_WSBEiJ_P0067254 Dhdds protein_coding protein_coding MGP_WSBEiJ_T0067255.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134891077 134916140 - MGP_WSBEiJ_P0067255 Dhdds protein_coding protein_coding MGP_WSBEiJ_T0067256.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134891105 134922149 - MGP_WSBEiJ_P0067256 Dhdds protein_coding protein_coding MGP_WSBEiJ_T0067257.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134891137 134922149 - MGP_WSBEiJ_P0067257 Dhdds protein_coding protein_coding MGP_WSBEiJ_T0067258.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134891399 134922674 - MGP_WSBEiJ_P0067258 Dhdds protein_coding protein_coding MGP_WSBEiJ_T0067259.1 MGP_WSBEiJ_G0028115.1 mouse_genomes_project 4 134901549 134918883 - Dhdds protein_coding processed_transcript MGP_WSBEiJ_T0066765.1 MGP_WSBEiJ_G0028019.1 mouse_genomes_project 4 129620292 129630590 + Ak2 protein_coding processed_transcript MGP_WSBEiJ_T0066766.1 MGP_WSBEiJ_G0028019.1 mouse_genomes_project 4 129621558 129644041 + MGP_WSBEiJ_P0066766 Ak2 protein_coding protein_coding MGP_WSBEiJ_T0066767.1 MGP_WSBEiJ_G0028019.1 mouse_genomes_project 4 129621558 129640821 + MGP_WSBEiJ_P0066767 Ak2 protein_coding protein_coding MGP_WSBEiJ_T0066768.1 MGP_WSBEiJ_G0028019.1 mouse_genomes_project 4 129621687 129640649 + MGP_WSBEiJ_P0066768 Ak2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014182.1 MGP_WSBEiJ_G0012312.1 mouse_genomes_project 4 71257951 71265667 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0067921.1 MGP_WSBEiJ_G0028271.1 mouse_genomes_project 4 143636811 143703637 - MGP_WSBEiJ_P0067921 Tmem51 protein_coding protein_coding MGP_WSBEiJ_T0066399.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120893384 120971528 - MGP_WSBEiJ_P0066399 Nfyc protein_coding unknown_likely_coding MGP_WSBEiJ_T0066400.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120893387 120961502 - MGP_WSBEiJ_P0066400 Nfyc protein_coding protein_coding MGP_WSBEiJ_T0066401.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120893387 120982083 - MGP_WSBEiJ_P0066401 Nfyc protein_coding protein_coding MGP_WSBEiJ_T0066402.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120893387 120971496 - MGP_WSBEiJ_P0066402 Nfyc protein_coding protein_coding MGP_WSBEiJ_T0066403.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120893902 120899554 - Nfyc protein_coding processed_transcript MGP_WSBEiJ_T0066404.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120894125 120929213 - MGP_WSBEiJ_P0066404 Nfyc protein_coding protein_coding MGP_WSBEiJ_T0066405.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120894145 120902794 - Nfyc protein_coding processed_transcript MGP_WSBEiJ_T0066406.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120899043 120905582 - Nfyc protein_coding processed_transcript MGP_WSBEiJ_T0066407.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120902617 120971474 - MGP_WSBEiJ_P0066407 Nfyc protein_coding protein_coding MGP_WSBEiJ_T0066408.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120906243 120971486 - MGP_WSBEiJ_P0066408 Nfyc protein_coding protein_coding MGP_WSBEiJ_T0066409.1 MGP_WSBEiJ_G0027923.1 mouse_genomes_project 4 120917916 120971497 - MGP_WSBEiJ_P0066409 Nfyc protein_coding protein_coding MGP_WSBEiJ_T0099540.1 MGP_WSBEiJ_G0038203.1 mouse_genomes_project 4 82100881 82101000 + Gm24884 snoRNA snoRNA MGP_WSBEiJ_T0014287.1 MGP_WSBEiJ_G0012417.1 mouse_genomes_project 4 108330640 108331022 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0066246.1 MGP_WSBEiJ_G0027879.1 mouse_genomes_project 4 118466275 118484858 - MGP_WSBEiJ_P0066246 Tie1 protein_coding protein_coding MGP_WSBEiJ_T0066247.1 MGP_WSBEiJ_G0027879.1 mouse_genomes_project 4 118466275 118485164 - MGP_WSBEiJ_P0066247 Tie1 protein_coding protein_coding MGP_WSBEiJ_T0066248.1 MGP_WSBEiJ_G0027879.1 mouse_genomes_project 4 118473130 118484896 - Tie1 protein_coding processed_transcript MGP_WSBEiJ_T0004407.1 MGP_WSBEiJ_G0003832.1 mouse_genomes_project 4 98223161 98228774 + Kank4os antisense antisense MGP_WSBEiJ_T0011359.1 MGP_WSBEiJ_G0009516.1 mouse_genomes_project 4 29669630 29669897 + Gm24371 misc_RNA misc_RNA MGP_WSBEiJ_T0064453.1 MGP_WSBEiJ_G0027471.1 mouse_genomes_project 4 43985976 44027411 - MGP_WSBEiJ_P0064453 Xpa protein_coding protein_coding MGP_WSBEiJ_T0064456.1 MGP_WSBEiJ_G0027471.1 mouse_genomes_project 4 44006413 44016923 - Xpa protein_coding processed_transcript MGP_WSBEiJ_T0064457.1 MGP_WSBEiJ_G0027471.1 mouse_genomes_project 4 44006413 44016890 - MGP_WSBEiJ_P0064457 Xpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0064458.1 MGP_WSBEiJ_G0027471.1 mouse_genomes_project 4 44006413 44027411 - MGP_WSBEiJ_P0064458 Xpa protein_coding protein_coding MGP_WSBEiJ_T0064459.1 MGP_WSBEiJ_G0027471.1 mouse_genomes_project 4 44014209 44027404 - MGP_WSBEiJ_P0064459 Xpa protein_coding protein_coding MGP_WSBEiJ_T0064460.1 MGP_WSBEiJ_G0027471.1 mouse_genomes_project 4 44015652 44017801 - Xpa protein_coding processed_transcript MGP_WSBEiJ_T0004455.1 MGP_WSBEiJ_G0003870.1 mouse_genomes_project 4 125324816 125357382 - Gm12930 antisense antisense MGP_WSBEiJ_T0063489.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2280747 2430847 + Fam110b protein_coding processed_transcript MGP_WSBEiJ_T0063490.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2280778 2433566 + MGP_WSBEiJ_P0063490 Fam110b protein_coding protein_coding MGP_WSBEiJ_T0063491.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2280782 2370577 + Fam110b protein_coding retained_intron MGP_WSBEiJ_T0063492.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2280847 2430959 + Fam110b protein_coding processed_transcript MGP_WSBEiJ_T0063493.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2280892 2738904 + Fam110b protein_coding processed_transcript MGP_WSBEiJ_T0063494.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2360190 2433566 + MGP_WSBEiJ_P0063494 Fam110b protein_coding protein_coding MGP_WSBEiJ_T0063495.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2405456 2431310 + MGP_WSBEiJ_P0063495 Fam110b protein_coding protein_coding MGP_WSBEiJ_T0063496.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2405456 2432411 + MGP_WSBEiJ_P0063496 Fam110b protein_coding protein_coding MGP_WSBEiJ_T0063497.1 MGP_WSBEiJ_G0027265.1 mouse_genomes_project 4 2430548 2430996 + Fam110b protein_coding processed_transcript MGP_WSBEiJ_T0063937.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37659430 37664167 - Ddx58 protein_coding processed_transcript MGP_WSBEiJ_T0063938.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37659434 37675753 - Ddx58 protein_coding processed_transcript MGP_WSBEiJ_T0063939.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37660506 37696407 - MGP_WSBEiJ_P0063939 Ddx58 protein_coding protein_coding MGP_WSBEiJ_T0063940.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37663848 37664435 - Ddx58 protein_coding processed_transcript MGP_WSBEiJ_T0063941.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37664410 37669511 - Ddx58 protein_coding processed_transcript MGP_WSBEiJ_T0063942.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37664492 37696279 - MGP_WSBEiJ_P0063942 Ddx58 protein_coding protein_coding MGP_WSBEiJ_T0063943.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37678588 37696334 - Ddx58 protein_coding processed_transcript MGP_WSBEiJ_T0063944.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37679033 37696301 - Ddx58 protein_coding processed_transcript MGP_WSBEiJ_T0063945.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37681712 37684162 - Ddx58 protein_coding processed_transcript MGP_WSBEiJ_T0063946.1 MGP_WSBEiJ_G0027371.1 mouse_genomes_project 4 37682864 37696404 - Ddx58 protein_coding processed_transcript MGP_WSBEiJ_T0063892.1 MGP_WSBEiJ_G0027359.1 mouse_genomes_project 4 31950247 31993428 - MGP_WSBEiJ_P0063892 Cfap206 protein_coding protein_coding MGP_WSBEiJ_T0063893.1 MGP_WSBEiJ_G0027359.1 mouse_genomes_project 4 31950649 31982851 - Cfap206 protein_coding processed_transcript MGP_WSBEiJ_T0063894.1 MGP_WSBEiJ_G0027359.1 mouse_genomes_project 4 31973729 31993400 - MGP_WSBEiJ_P0063894 Cfap206 protein_coding protein_coding MGP_WSBEiJ_T0063895.1 MGP_WSBEiJ_G0027359.1 mouse_genomes_project 4 31984636 31993417 - MGP_WSBEiJ_P0063895 Cfap206 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0063896.1 MGP_WSBEiJ_G0027359.1 mouse_genomes_project 4 31984667 31993417 - MGP_WSBEiJ_P0063896 Cfap206 protein_coding protein_coding MGP_WSBEiJ_T0063897.1 MGP_WSBEiJ_G0027359.1 mouse_genomes_project 4 31986801 31993417 - Cfap206 protein_coding processed_transcript MGP_WSBEiJ_T0014118.1 MGP_WSBEiJ_G0012248.1 mouse_genomes_project 4 44108930 44111645 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0064543.1 MGP_WSBEiJ_G0027493.1 mouse_genomes_project 4 46554848 46636862 + MGP_WSBEiJ_P0064543 Tmeff1 protein_coding protein_coding MGP_WSBEiJ_T0064544.1 MGP_WSBEiJ_G0027493.1 mouse_genomes_project 4 46555039 46634481 + MGP_WSBEiJ_P0064544 Tmeff1 protein_coding protein_coding MGP_WSBEiJ_T0064545.1 MGP_WSBEiJ_G0027493.1 mouse_genomes_project 4 46555225 46634866 + MGP_WSBEiJ_P0064545 Tmeff1 protein_coding protein_coding MGP_WSBEiJ_T0064546.1 MGP_WSBEiJ_G0027493.1 mouse_genomes_project 4 46608496 46632634 + MGP_WSBEiJ_P0064546 Tmeff1 protein_coding protein_coding MGP_WSBEiJ_T0004342.1 MGP_WSBEiJ_G0003785.1 mouse_genomes_project 4 5949271 5952675 - Gm11816 antisense antisense MGP_WSBEiJ_T0004343.1 MGP_WSBEiJ_G0003785.1 mouse_genomes_project 4 5951152 5952617 - Gm11816 antisense antisense MGP_WSBEiJ_T0014358.1 MGP_WSBEiJ_G0012488.1 mouse_genomes_project 4 133604958 133605243 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097396.1 MGP_WSBEiJ_G0036070.1 mouse_genomes_project 4 136473661 136474377 - Gm15979 sense_intronic sense_intronic MGP_WSBEiJ_T0008188.1 MGP_WSBEiJ_G0006662.1 mouse_genomes_project 5 117954541 117956939 - Gm13842 lincRNA lincRNA MGP_WSBEiJ_T0008189.1 MGP_WSBEiJ_G0006662.1 mouse_genomes_project 5 117954976 117957333 - Gm13842 lincRNA lincRNA MGP_WSBEiJ_T0069944.1 MGP_WSBEiJ_G0028650.1 mouse_genomes_project 5 32141709 32237739 - MGP_WSBEiJ_P0069944 Zfyve28 protein_coding protein_coding MGP_WSBEiJ_T0069945.1 MGP_WSBEiJ_G0028650.1 mouse_genomes_project 5 32165451 32182803 - Zfyve28 protein_coding retained_intron MGP_WSBEiJ_T0069946.1 MGP_WSBEiJ_G0028650.1 mouse_genomes_project 5 32165536 32183265 - Zfyve28 protein_coding processed_transcript MGP_WSBEiJ_T0069947.1 MGP_WSBEiJ_G0028650.1 mouse_genomes_project 5 32170952 32193804 - Zfyve28 protein_coding retained_intron MGP_WSBEiJ_T0069948.1 MGP_WSBEiJ_G0028650.1 mouse_genomes_project 5 32176834 32237862 - Zfyve28 protein_coding processed_transcript MGP_WSBEiJ_T0069949.1 MGP_WSBEiJ_G0028650.1 mouse_genomes_project 5 32184658 32237850 - MGP_WSBEiJ_P0069949 Zfyve28 protein_coding protein_coding MGP_WSBEiJ_T0001701.1 MGP_WSBEiJ_G0001623.1 mouse_genomes_project 5 105901799 105902167 - TEC TEC MGP_WSBEiJ_T0001567.1 MGP_WSBEiJ_G0001491.1 mouse_genomes_project 5 56537871 56539817 + TEC TEC MGP_WSBEiJ_T0001823.1 MGP_WSBEiJ_G0001744.1 mouse_genomes_project 5 135353620 135355256 - TEC TEC MGP_WSBEiJ_T0001464.1 MGP_WSBEiJ_G0001389.1 mouse_genomes_project 5 30865175 30866424 + TEC TEC MGP_WSBEiJ_T0004562.1 MGP_WSBEiJ_G0003950.1 mouse_genomes_project 5 18284727 18290129 + A630072M18Rik antisense antisense MGP_WSBEiJ_T0071183.1 MGP_WSBEiJ_G0028860.1 mouse_genomes_project 5 86507102 86621710 - MGP_WSBEiJ_P0071183 Tmprss11f protein_coding protein_coding MGP_WSBEiJ_T0071184.1 MGP_WSBEiJ_G0028860.1 mouse_genomes_project 5 86544631 86621710 - Tmprss11f protein_coding processed_transcript MGP_WSBEiJ_T0071185.1 MGP_WSBEiJ_G0028860.1 mouse_genomes_project 5 86574813 86621669 - Tmprss11f protein_coding retained_intron MGP_WSBEiJ_T0070076.1 MGP_WSBEiJ_G0028668.1 mouse_genomes_project 5 33502235 33526484 - MGP_WSBEiJ_P0070076 Cpz protein_coding protein_coding MGP_WSBEiJ_T0070077.1 MGP_WSBEiJ_G0028668.1 mouse_genomes_project 5 33518538 33526360 - MGP_WSBEiJ_P0070077 Cpz protein_coding protein_coding MGP_WSBEiJ_T0073669.1 MGP_WSBEiJ_G0029349.1 mouse_genomes_project 5 138430670 138432324 + MGP_WSBEiJ_P0073669 Dnajc30 protein_coding protein_coding MGP_WSBEiJ_T0068979.1 MGP_WSBEiJ_G0028483.1 mouse_genomes_project 5 6067693 6132898 + MGP_WSBEiJ_P0068979 Tmem243 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068980.1 MGP_WSBEiJ_G0028483.1 mouse_genomes_project 5 6067810 6088973 + MGP_WSBEiJ_P0068980 Tmem243 protein_coding protein_coding MGP_WSBEiJ_T0068999.1 MGP_WSBEiJ_G0028483.1 mouse_genomes_project 5 6130550 6135854 + Tmem243 protein_coding processed_transcript MGP_WSBEiJ_T0007913.1 MGP_WSBEiJ_G0006470.1 mouse_genomes_project 5 5957383 5958651 - Gm15611 lincRNA lincRNA MGP_WSBEiJ_T0071169.1 MGP_WSBEiJ_G0028854.1 mouse_genomes_project 5 86073350 86143780 - MGP_WSBEiJ_P0071169 Uba6 protein_coding protein_coding MGP_WSBEiJ_T0071170.1 MGP_WSBEiJ_G0028854.1 mouse_genomes_project 5 86086637 86143781 - Uba6 protein_coding retained_intron MGP_WSBEiJ_T0097406.1 MGP_WSBEiJ_G0036080.1 mouse_genomes_project 5 2234773 2237332 - Gm43728 sense_intronic sense_intronic MGP_WSBEiJ_T0072144.1 MGP_WSBEiJ_G0029081.1 mouse_genomes_project 5 113802996 113809006 - MGP_WSBEiJ_P0072144 Cryba4 protein_coding protein_coding MGP_WSBEiJ_T0072145.1 MGP_WSBEiJ_G0029081.1 mouse_genomes_project 5 113802997 113807652 - MGP_WSBEiJ_P0072145 Cryba4 protein_coding protein_coding MGP_WSBEiJ_T0072146.1 MGP_WSBEiJ_G0029081.1 mouse_genomes_project 5 113803036 113808292 - MGP_WSBEiJ_P0072146 Cryba4 protein_coding protein_coding MGP_WSBEiJ_T0001810.1 MGP_WSBEiJ_G0001731.1 mouse_genomes_project 5 134759621 134760321 - TEC TEC MGP_WSBEiJ_T0001822.1 MGP_WSBEiJ_G0001743.1 mouse_genomes_project 5 135350392 135351720 - TEC TEC MGP_WSBEiJ_T0001514.1 MGP_WSBEiJ_G0001439.1 mouse_genomes_project 5 46444101 46445714 + TEC TEC MGP_WSBEiJ_T0072004.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111506979 111508337 - Gtpbp6 protein_coding retained_intron MGP_WSBEiJ_T0072005.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111506980 111510204 - Gtpbp6 protein_coding retained_intron MGP_WSBEiJ_T0072006.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111507022 111511169 - MGP_WSBEiJ_P0072006 Gtpbp6 protein_coding protein_coding MGP_WSBEiJ_T0072007.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111507909 111510178 - Gtpbp6 protein_coding processed_transcript MGP_WSBEiJ_T0072008.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111508233 111510413 - MGP_WSBEiJ_P0072008 Gtpbp6 protein_coding protein_coding MGP_WSBEiJ_T0072009.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111508792 111509926 - Gtpbp6 protein_coding retained_intron MGP_WSBEiJ_T0072010.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111509650 111511138 - Gtpbp6 protein_coding processed_transcript MGP_WSBEiJ_T0072011.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111509702 111510605 - Gtpbp6 protein_coding retained_intron MGP_WSBEiJ_T0072012.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111509849 111510429 - Gtpbp6 protein_coding retained_intron MGP_WSBEiJ_T0072013.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111510037 111510709 - Gtpbp6 protein_coding retained_intron MGP_WSBEiJ_T0072014.1 MGP_WSBEiJ_G0029058.1 mouse_genomes_project 5 111510050 111511159 - Gtpbp6 protein_coding retained_intron MGP_WSBEiJ_T0073441.1 MGP_WSBEiJ_G0029315.1 mouse_genomes_project 5 133038974 133053364 - MGP_WSBEiJ_P0073441 Asl protein_coding protein_coding MGP_WSBEiJ_T0073442.1 MGP_WSBEiJ_G0029315.1 mouse_genomes_project 5 133039210 133042439 - MGP_WSBEiJ_P0073442 Asl protein_coding protein_coding MGP_WSBEiJ_T0073443.1 MGP_WSBEiJ_G0029315.1 mouse_genomes_project 5 133039211 133059328 - MGP_WSBEiJ_P0073443 Asl protein_coding protein_coding MGP_WSBEiJ_T0073444.1 MGP_WSBEiJ_G0029315.1 mouse_genomes_project 5 133039220 133055382 - MGP_WSBEiJ_P0073444 Asl protein_coding protein_coding MGP_WSBEiJ_T0073445.1 MGP_WSBEiJ_G0029315.1 mouse_genomes_project 5 133041163 133053283 - MGP_WSBEiJ_P0073445 Asl protein_coding protein_coding MGP_WSBEiJ_T0073446.1 MGP_WSBEiJ_G0029315.1 mouse_genomes_project 5 133044470 133053356 - Asl protein_coding processed_transcript MGP_WSBEiJ_T0073447.1 MGP_WSBEiJ_G0029315.1 mouse_genomes_project 5 133048702 133053300 - MGP_WSBEiJ_P0073447 Asl protein_coding protein_coding MGP_WSBEiJ_T0073448.1 MGP_WSBEiJ_G0029315.1 mouse_genomes_project 5 133051281 133053328 - Asl protein_coding retained_intron MGP_WSBEiJ_T0004694.1 MGP_WSBEiJ_G0004051.1 mouse_genomes_project 5 111887185 111889143 + Gm42596 antisense antisense MGP_WSBEiJ_T0100116.1 MGP_WSBEiJ_G0038716.1 mouse_genomes_project 5 87967266 87969917 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100117.1 MGP_WSBEiJ_G0038716.1 mouse_genomes_project 5 87967425 87968554 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0001623.1 MGP_WSBEiJ_G0001546.1 mouse_genomes_project 5 66868112 66869746 - TEC TEC MGP_WSBEiJ_T0001448.1 MGP_WSBEiJ_G0001375.1 mouse_genomes_project 5 28606392 28609623 - TEC TEC MGP_WSBEiJ_T0098329.1 MGP_WSBEiJ_G0036992.1 mouse_genomes_project 5 21336294 21336449 - Gm22054 snRNA snRNA MGP_WSBEiJ_T0001584.1 MGP_WSBEiJ_G0001507.1 mouse_genomes_project 5 63265930 63268249 + TEC TEC MGP_WSBEiJ_T0007992.1 MGP_WSBEiJ_G0006520.1 mouse_genomes_project 5 42005680 42006720 - Gm42555 lincRNA lincRNA MGP_WSBEiJ_T0014443.1 MGP_WSBEiJ_G0012573.1 mouse_genomes_project 5 17560392 17560732 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069108.1 MGP_WSBEiJ_G0028504.1 mouse_genomes_project 5 18726172 18732821 + MGP_WSBEiJ_P0069108 Fgl2 protein_coding protein_coding MGP_WSBEiJ_T0072058.1 MGP_WSBEiJ_G0029066.1 mouse_genomes_project 5 111775898 111779042 - MGP_WSBEiJ_P0072058 P2rx2 protein_coding protein_coding MGP_WSBEiJ_T0072059.1 MGP_WSBEiJ_G0029066.1 mouse_genomes_project 5 111775898 111779299 - MGP_WSBEiJ_P0072059 P2rx2 protein_coding protein_coding MGP_WSBEiJ_T0072060.1 MGP_WSBEiJ_G0029066.1 mouse_genomes_project 5 111775898 111779042 - MGP_WSBEiJ_P0072060 P2rx2 protein_coding protein_coding MGP_WSBEiJ_T0072061.1 MGP_WSBEiJ_G0029066.1 mouse_genomes_project 5 111775899 111779063 - MGP_WSBEiJ_P0072061 P2rx2 protein_coding protein_coding MGP_WSBEiJ_T0072062.1 MGP_WSBEiJ_G0029066.1 mouse_genomes_project 5 111776056 111779236 - P2rx2 protein_coding retained_intron MGP_WSBEiJ_T0072063.1 MGP_WSBEiJ_G0029066.1 mouse_genomes_project 5 111776279 111779003 - MGP_WSBEiJ_P0072063 P2rx2 protein_coding protein_coding MGP_WSBEiJ_T0001397.1 MGP_WSBEiJ_G0001325.1 mouse_genomes_project 5 602119 605829 - TEC TEC MGP_WSBEiJ_T0072092.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112122196 112234462 - MGP_WSBEiJ_P0072092 Ep400 protein_coding protein_coding MGP_WSBEiJ_T0072093.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112122196 112234272 - MGP_WSBEiJ_P0072093 Ep400 protein_coding protein_coding MGP_WSBEiJ_T0072094.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112122201 112234462 - MGP_WSBEiJ_P0072094 Ep400 protein_coding protein_coding MGP_WSBEiJ_T0072095.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112125193 112126012 - Ep400 protein_coding processed_transcript MGP_WSBEiJ_T0072096.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112125357 112126631 - Ep400 protein_coding retained_intron MGP_WSBEiJ_T0072097.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112145659 112149864 - Ep400 protein_coding retained_intron MGP_WSBEiJ_T0072098.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112153666 112156838 - Ep400 protein_coding retained_intron MGP_WSBEiJ_T0072099.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112155045 112165647 - MGP_WSBEiJ_P0072099 Ep400 protein_coding protein_coding MGP_WSBEiJ_T0072100.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112200000 112234330 - MGP_WSBEiJ_P0072100 Ep400 protein_coding protein_coding MGP_WSBEiJ_T0072101.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112200398 112233900 - MGP_WSBEiJ_P0072101 Ep400 protein_coding protein_coding MGP_WSBEiJ_T0072102.1 MGP_WSBEiJ_G0029072.1 mouse_genomes_project 5 112219567 112234462 - Ep400 protein_coding processed_transcript MGP_WSBEiJ_T0007959.1 MGP_WSBEiJ_G0006499.1 mouse_genomes_project 5 31336179 31337019 - Gm43851 lincRNA lincRNA MGP_WSBEiJ_T0074876.1 MGP_WSBEiJ_G0029589.1 mouse_genomes_project 5 155601310 155643127 + MGP_WSBEiJ_P0074876 Kl protein_coding protein_coding MGP_WSBEiJ_T0074877.1 MGP_WSBEiJ_G0029589.1 mouse_genomes_project 5 155601407 155636289 + Kl protein_coding retained_intron MGP_WSBEiJ_T0001755.1 MGP_WSBEiJ_G0001677.1 mouse_genomes_project 5 122800142 122801126 - TEC TEC MGP_WSBEiJ_T0068981.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6088922 6136644 - MGP_WSBEiJ_P0068981 Dmtf1 protein_coding protein_coding MGP_WSBEiJ_T0068982.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6088974 6136587 - MGP_WSBEiJ_P0068982 Dmtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068983.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6088978 6136617 - MGP_WSBEiJ_P0068983 Dmtf1 protein_coding protein_coding MGP_WSBEiJ_T0068984.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6088979 6136620 - MGP_WSBEiJ_P0068984 Dmtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068985.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6088979 6136627 - MGP_WSBEiJ_P0068985 Dmtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068986.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6088983 6136611 - MGP_WSBEiJ_P0068986 Dmtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068987.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6088983 6122944 - MGP_WSBEiJ_P0068987 Dmtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068988.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6089175 6136539 - MGP_WSBEiJ_P0068988 Dmtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068989.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6089898 6090837 - Dmtf1 protein_coding retained_intron MGP_WSBEiJ_T0068990.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6090112 6136569 - MGP_WSBEiJ_P0068990 Dmtf1 protein_coding protein_coding MGP_WSBEiJ_T0068991.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6091559 6096684 - MGP_WSBEiJ_P0068991 Dmtf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068992.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6092163 6136611 - Dmtf1 protein_coding processed_transcript MGP_WSBEiJ_T0068993.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6099474 6136605 - Dmtf1 protein_coding retained_intron MGP_WSBEiJ_T0068994.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6101397 6136584 - MGP_WSBEiJ_P0068994 Dmtf1 protein_coding protein_coding MGP_WSBEiJ_T0068995.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6102651 6121841 - MGP_WSBEiJ_P0068995 Dmtf1 protein_coding protein_coding MGP_WSBEiJ_T0068996.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6109886 6136602 - Dmtf1 protein_coding retained_intron MGP_WSBEiJ_T0068997.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6116155 6136617 - Dmtf1 protein_coding retained_intron MGP_WSBEiJ_T0068998.1 MGP_WSBEiJ_G0028484.1 mouse_genomes_project 5 6120226 6122734 - MGP_WSBEiJ_P0068998 Dmtf1 protein_coding protein_coding MGP_WSBEiJ_T0071554.1 MGP_WSBEiJ_G0028961.1 mouse_genomes_project 5 98863186 98890611 + MGP_WSBEiJ_P0071554 Fgf5 protein_coding protein_coding MGP_WSBEiJ_T0071555.1 MGP_WSBEiJ_G0028961.1 mouse_genomes_project 5 98863414 98889040 + MGP_WSBEiJ_P0071555 Fgf5 protein_coding protein_coding MGP_WSBEiJ_T0073095.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126419542 126442693 - MGP_WSBEiJ_P0073095 Rsrc2 protein_coding protein_coding MGP_WSBEiJ_T0073096.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126419848 126436058 - Rsrc2 protein_coding processed_transcript MGP_WSBEiJ_T0073097.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126420131 126442638 - MGP_WSBEiJ_P0073097 Rsrc2 protein_coding protein_coding MGP_WSBEiJ_T0073098.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126420142 126442604 - MGP_WSBEiJ_P0073098 Rsrc2 protein_coding protein_coding MGP_WSBEiJ_T0073099.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126420208 126436083 - MGP_WSBEiJ_P0073099 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073100.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126420208 126436870 - MGP_WSBEiJ_P0073100 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073101.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126420208 126436870 - MGP_WSBEiJ_P0073101 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073102.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126420371 126425599 - Rsrc2 protein_coding retained_intron MGP_WSBEiJ_T0073103.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126421655 126442610 - MGP_WSBEiJ_P0073103 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073104.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126425273 126442636 - MGP_WSBEiJ_P0073104 Rsrc2 protein_coding protein_coding MGP_WSBEiJ_T0073105.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126425507 126442605 - MGP_WSBEiJ_P0073105 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073106.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126425507 126442606 - MGP_WSBEiJ_P0073106 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073107.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126426738 126438794 - Rsrc2 protein_coding retained_intron MGP_WSBEiJ_T0073108.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126426793 126433610 - Rsrc2 protein_coding retained_intron MGP_WSBEiJ_T0073109.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126428519 126442595 - MGP_WSBEiJ_P0073109 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073110.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126428566 126442636 - MGP_WSBEiJ_P0073110 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073111.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126431573 126442593 - MGP_WSBEiJ_P0073111 Rsrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073112.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126432693 126442591 - Rsrc2 protein_coding processed_transcript MGP_WSBEiJ_T0073113.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126435211 126442605 - Rsrc2 protein_coding retained_intron MGP_WSBEiJ_T0073114.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126435211 126442605 - Rsrc2 protein_coding retained_intron MGP_WSBEiJ_T0073115.1 MGP_WSBEiJ_G0029255.1 mouse_genomes_project 5 126436793 126438455 - Rsrc2 protein_coding retained_intron MGP_WSBEiJ_T0008291.1 MGP_WSBEiJ_G0006731.1 mouse_genomes_project 5 143691239 143699318 + Gm42423 lincRNA lincRNA MGP_WSBEiJ_T0014454.1 MGP_WSBEiJ_G0012584.1 mouse_genomes_project 5 19341843 19342485 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008254.1 MGP_WSBEiJ_G0006705.1 mouse_genomes_project 5 129937119 129937907 + Gm43475 lincRNA lincRNA MGP_WSBEiJ_T0001478.1 MGP_WSBEiJ_G0001403.1 mouse_genomes_project 5 36214171 36215580 - TEC TEC MGP_WSBEiJ_T0073231.1 MGP_WSBEiJ_G0029275.1 mouse_genomes_project 5 127288807 127301561 + MGP_WSBEiJ_P0073231 Tmed2 protein_coding protein_coding MGP_WSBEiJ_T0073232.1 MGP_WSBEiJ_G0029275.1 mouse_genomes_project 5 127289067 127300569 + MGP_WSBEiJ_P0073232 Tmed2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073233.1 MGP_WSBEiJ_G0029275.1 mouse_genomes_project 5 127289441 127300760 + MGP_WSBEiJ_P0073233 Tmed2 protein_coding protein_coding MGP_WSBEiJ_T0073234.1 MGP_WSBEiJ_G0029275.1 mouse_genomes_project 5 127289448 127289864 + Tmed2 protein_coding retained_intron MGP_WSBEiJ_T0071297.1 MGP_WSBEiJ_G0028900.1 mouse_genomes_project 5 88928662 88958567 + Mob1b protein_coding retained_intron MGP_WSBEiJ_T0071298.1 MGP_WSBEiJ_G0028900.1 mouse_genomes_project 5 88928662 88975015 + MGP_WSBEiJ_P0071298 Mob1b protein_coding protein_coding MGP_WSBEiJ_T0071299.1 MGP_WSBEiJ_G0028900.1 mouse_genomes_project 5 88928678 88968274 + MGP_WSBEiJ_P0071299 Mob1b protein_coding protein_coding MGP_WSBEiJ_T0071300.1 MGP_WSBEiJ_G0028900.1 mouse_genomes_project 5 88928784 88959282 + Mob1b protein_coding retained_intron MGP_WSBEiJ_T0069388.1 MGP_WSBEiJ_G0028561.1 mouse_genomes_project 5 26149081 26159510 - MGP_WSBEiJ_P0069388 Shh protein_coding protein_coding MGP_WSBEiJ_T0071818.1 MGP_WSBEiJ_G0029018.1 mouse_genomes_project 5 108029123 108050117 + MGP_WSBEiJ_P0071818 Cdc7 protein_coding protein_coding MGP_WSBEiJ_T0071819.1 MGP_WSBEiJ_G0029018.1 mouse_genomes_project 5 108029123 108050118 + MGP_WSBEiJ_P0071819 Cdc7 protein_coding protein_coding MGP_WSBEiJ_T0071820.1 MGP_WSBEiJ_G0029018.1 mouse_genomes_project 5 108029182 108050118 + MGP_WSBEiJ_P0071820 Cdc7 protein_coding protein_coding MGP_WSBEiJ_T0071821.1 MGP_WSBEiJ_G0029018.1 mouse_genomes_project 5 108029193 108050118 + Cdc7 protein_coding retained_intron MGP_WSBEiJ_T0071822.1 MGP_WSBEiJ_G0029018.1 mouse_genomes_project 5 108029362 108050117 + MGP_WSBEiJ_P0071822 Cdc7 protein_coding protein_coding MGP_WSBEiJ_T0071823.1 MGP_WSBEiJ_G0029018.1 mouse_genomes_project 5 108029819 108049041 + MGP_WSBEiJ_P0071823 Cdc7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071824.1 MGP_WSBEiJ_G0029018.1 mouse_genomes_project 5 108039337 108039984 + Cdc7 protein_coding processed_transcript MGP_WSBEiJ_T0071825.1 MGP_WSBEiJ_G0029018.1 mouse_genomes_project 5 108040029 108045042 + Cdc7 protein_coding retained_intron MGP_WSBEiJ_T0008070.1 MGP_WSBEiJ_G0006584.1 mouse_genomes_project 5 92103808 92108394 - Gm28271 lincRNA lincRNA MGP_WSBEiJ_T0073409.1 MGP_WSBEiJ_G0029308.1 mouse_genomes_project 5 132810719 132828550 - MGP_WSBEiJ_P0073409 Psph protein_coding protein_coding MGP_WSBEiJ_T0073410.1 MGP_WSBEiJ_G0029308.1 mouse_genomes_project 5 132810719 132836844 - MGP_WSBEiJ_P0073410 Psph protein_coding protein_coding MGP_WSBEiJ_T0073411.1 MGP_WSBEiJ_G0029308.1 mouse_genomes_project 5 132814480 132828590 - MGP_WSBEiJ_P0073411 Psph protein_coding protein_coding MGP_WSBEiJ_T0073412.1 MGP_WSBEiJ_G0029308.1 mouse_genomes_project 5 132817089 132836549 - MGP_WSBEiJ_P0073412 Psph protein_coding protein_coding MGP_WSBEiJ_T0073413.1 MGP_WSBEiJ_G0029308.1 mouse_genomes_project 5 132817809 132828583 - Psph protein_coding retained_intron MGP_WSBEiJ_T0073414.1 MGP_WSBEiJ_G0029308.1 mouse_genomes_project 5 132826242 132836647 - Psph protein_coding retained_intron MGP_WSBEiJ_T0073415.1 MGP_WSBEiJ_G0029308.1 mouse_genomes_project 5 132828757 132836602 - Psph protein_coding processed_transcript MGP_WSBEiJ_T0069014.1 MGP_WSBEiJ_G0028488.1 mouse_genomes_project 5 10110127 10301291 + Sema3a protein_coding processed_transcript MGP_WSBEiJ_T0069015.1 MGP_WSBEiJ_G0028488.1 mouse_genomes_project 5 10110306 10539492 + Sema3a protein_coding retained_intron MGP_WSBEiJ_T0069016.1 MGP_WSBEiJ_G0028488.1 mouse_genomes_project 5 10395755 10616069 + MGP_WSBEiJ_P0069016 Sema3a protein_coding protein_coding MGP_WSBEiJ_T0069017.1 MGP_WSBEiJ_G0028488.1 mouse_genomes_project 5 10398840 10454409 + MGP_WSBEiJ_P0069017 Sema3a protein_coding protein_coding MGP_WSBEiJ_T0069018.1 MGP_WSBEiJ_G0028488.1 mouse_genomes_project 5 10399149 10614429 + MGP_WSBEiJ_P0069018 Sema3a protein_coding protein_coding MGP_WSBEiJ_T0069019.1 MGP_WSBEiJ_G0028488.1 mouse_genomes_project 5 10399384 10617646 + MGP_WSBEiJ_P0069019 Sema3a protein_coding protein_coding MGP_WSBEiJ_T0069020.1 MGP_WSBEiJ_G0028488.1 mouse_genomes_project 5 10399399 10454379 + MGP_WSBEiJ_P0069020 Sema3a protein_coding protein_coding MGP_WSBEiJ_T0069021.1 MGP_WSBEiJ_G0028488.1 mouse_genomes_project 5 10399652 10502134 + Sema3a protein_coding processed_transcript MGP_WSBEiJ_T0072487.1 MGP_WSBEiJ_G0029150.1 mouse_genomes_project 5 117355965 117363549 - MGP_WSBEiJ_P0072487 Sirt4 protein_coding protein_coding MGP_WSBEiJ_T0072488.1 MGP_WSBEiJ_G0029150.1 mouse_genomes_project 5 117355965 117363977 - MGP_WSBEiJ_P0072488 Sirt4 protein_coding protein_coding MGP_WSBEiJ_T0072489.1 MGP_WSBEiJ_G0029150.1 mouse_genomes_project 5 117355968 117359202 - Sirt4 protein_coding retained_intron MGP_WSBEiJ_T0072490.1 MGP_WSBEiJ_G0029150.1 mouse_genomes_project 5 117359423 117362108 - Sirt4 protein_coding retained_intron MGP_WSBEiJ_T0072491.1 MGP_WSBEiJ_G0029150.1 mouse_genomes_project 5 117359494 117363597 - Sirt4 protein_coding processed_transcript MGP_WSBEiJ_T0072492.1 MGP_WSBEiJ_G0029150.1 mouse_genomes_project 5 117361713 117363618 - Sirt4 protein_coding retained_intron MGP_WSBEiJ_T0010527.1 MGP_WSBEiJ_G0008684.1 mouse_genomes_project 5 99104846 99104955 - Mir703 miRNA miRNA MGP_WSBEiJ_T0001735.1 MGP_WSBEiJ_G0001657.1 mouse_genomes_project 5 117300917 117303147 - TEC TEC MGP_WSBEiJ_T0068762.1 MGP_WSBEiJ_G0028449.1 mouse_genomes_project 5 217051 365843 + MGP_WSBEiJ_P0068762 Cdk6 protein_coding protein_coding MGP_WSBEiJ_T0068763.1 MGP_WSBEiJ_G0028449.1 mouse_genomes_project 5 309689 311921 + Cdk6 protein_coding retained_intron MGP_WSBEiJ_T0071490.1 MGP_WSBEiJ_G0028945.1 mouse_genomes_project 5 93472152 93476048 - MGP_WSBEiJ_P0071490 Sowahb protein_coding protein_coding MGP_WSBEiJ_T0070755.1 MGP_WSBEiJ_G0028781.1 mouse_genomes_project 5 66498767 66502727 + MGP_WSBEiJ_P0070755 Tmem33 protein_coding protein_coding MGP_WSBEiJ_T0070756.1 MGP_WSBEiJ_G0028781.1 mouse_genomes_project 5 66498812 66519536 + MGP_WSBEiJ_P0070756 Tmem33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070757.1 MGP_WSBEiJ_G0028781.1 mouse_genomes_project 5 66498813 66524357 + MGP_WSBEiJ_P0070757 Tmem33 protein_coding protein_coding MGP_WSBEiJ_T0070758.1 MGP_WSBEiJ_G0028781.1 mouse_genomes_project 5 66498820 66502394 + MGP_WSBEiJ_P0070758 Tmem33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070759.1 MGP_WSBEiJ_G0028781.1 mouse_genomes_project 5 66498870 66501188 + Tmem33 protein_coding retained_intron MGP_WSBEiJ_T0070760.1 MGP_WSBEiJ_G0028781.1 mouse_genomes_project 5 66499012 66507121 + Tmem33 protein_coding retained_intron MGP_WSBEiJ_T0070761.1 MGP_WSBEiJ_G0028781.1 mouse_genomes_project 5 66499105 66519102 + MGP_WSBEiJ_P0070761 Tmem33 protein_coding protein_coding MGP_WSBEiJ_T0099609.1 MGP_WSBEiJ_G0038272.1 mouse_genomes_project 5 93506975 93507111 + Gm22915 snoRNA snoRNA MGP_WSBEiJ_T0073698.1 MGP_WSBEiJ_G0029356.1 mouse_genomes_project 5 138669602 138734226 - MGP_WSBEiJ_P0073698 Fkbp6 protein_coding protein_coding MGP_WSBEiJ_T0073699.1 MGP_WSBEiJ_G0029356.1 mouse_genomes_project 5 138669602 138734196 - MGP_WSBEiJ_P0073699 Fkbp6 protein_coding protein_coding MGP_WSBEiJ_T0073700.1 MGP_WSBEiJ_G0029356.1 mouse_genomes_project 5 138721509 138734057 - MGP_WSBEiJ_P0073700 Fkbp6 protein_coding protein_coding MGP_WSBEiJ_T0073701.1 MGP_WSBEiJ_G0029356.1 mouse_genomes_project 5 138721509 138734225 - MGP_WSBEiJ_P0073701 Fkbp6 protein_coding protein_coding MGP_WSBEiJ_T0001853.1 MGP_WSBEiJ_G0001773.1 mouse_genomes_project 5 145230211 145232581 - TEC TEC MGP_WSBEiJ_T0069698.1 MGP_WSBEiJ_G0028612.1 mouse_genomes_project 5 29054377 29058072 - MGP_WSBEiJ_P0069698 Fndc4 protein_coding protein_coding MGP_WSBEiJ_T0069699.1 MGP_WSBEiJ_G0028612.1 mouse_genomes_project 5 29055021 29055849 - MGP_WSBEiJ_P0069699 Fndc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069700.1 MGP_WSBEiJ_G0028612.1 mouse_genomes_project 5 29055021 29058007 - MGP_WSBEiJ_P0069700 Fndc4 protein_coding protein_coding MGP_WSBEiJ_T0069701.1 MGP_WSBEiJ_G0028612.1 mouse_genomes_project 5 29055407 29056102 - Fndc4 protein_coding retained_intron MGP_WSBEiJ_T0069702.1 MGP_WSBEiJ_G0028612.1 mouse_genomes_project 5 29055821 29057569 - MGP_WSBEiJ_P0069702 Fndc4 protein_coding protein_coding MGP_WSBEiJ_T0069703.1 MGP_WSBEiJ_G0028612.1 mouse_genomes_project 5 29056221 29057395 - Fndc4 protein_coding retained_intron MGP_WSBEiJ_T0069704.1 MGP_WSBEiJ_G0028612.1 mouse_genomes_project 5 29056850 29058216 - MGP_WSBEiJ_P0069704 Fndc4 protein_coding protein_coding MGP_WSBEiJ_T0069222.1 MGP_WSBEiJ_G0028527.1 mouse_genomes_project 5 21903989 21923565 + MGP_WSBEiJ_P0069222 Nos3 protein_coding protein_coding MGP_WSBEiJ_T0069223.1 MGP_WSBEiJ_G0028527.1 mouse_genomes_project 5 21903989 21923417 + MGP_WSBEiJ_P0069223 Nos3 protein_coding protein_coding MGP_WSBEiJ_T0074089.1 MGP_WSBEiJ_G0029430.1 mouse_genomes_project 5 141701769 141718801 + MGP_WSBEiJ_P0074089 Zscan21 protein_coding protein_coding MGP_WSBEiJ_T0074090.1 MGP_WSBEiJ_G0029430.1 mouse_genomes_project 5 141701782 141718853 + MGP_WSBEiJ_P0074090 Zscan21 protein_coding protein_coding MGP_WSBEiJ_T0074091.1 MGP_WSBEiJ_G0029430.1 mouse_genomes_project 5 141701803 141718802 + MGP_WSBEiJ_P0074091 Zscan21 protein_coding protein_coding MGP_WSBEiJ_T0074092.1 MGP_WSBEiJ_G0029430.1 mouse_genomes_project 5 141701803 141718853 + MGP_WSBEiJ_P0074092 Zscan21 protein_coding protein_coding MGP_WSBEiJ_T0074093.1 MGP_WSBEiJ_G0029430.1 mouse_genomes_project 5 141701846 141717835 + MGP_WSBEiJ_P0074093 Zscan21 protein_coding protein_coding MGP_WSBEiJ_T0074094.1 MGP_WSBEiJ_G0029430.1 mouse_genomes_project 5 141701848 141710130 + MGP_WSBEiJ_P0074094 Zscan21 protein_coding protein_coding MGP_WSBEiJ_T0074095.1 MGP_WSBEiJ_G0029430.1 mouse_genomes_project 5 141701907 141718804 + MGP_WSBEiJ_P0074095 Zscan21 protein_coding protein_coding MGP_WSBEiJ_T0008239.1 MGP_WSBEiJ_G0006698.1 mouse_genomes_project 5 128750739 128775419 + Gm42952 lincRNA lincRNA MGP_WSBEiJ_T0008240.1 MGP_WSBEiJ_G0006698.1 mouse_genomes_project 5 128754390 128775620 + Gm42952 lincRNA lincRNA MGP_WSBEiJ_T0008241.1 MGP_WSBEiJ_G0006698.1 mouse_genomes_project 5 128754402 128768987 + Gm42952 lincRNA lincRNA MGP_WSBEiJ_T0008242.1 MGP_WSBEiJ_G0006698.1 mouse_genomes_project 5 128754407 128767707 + Gm42952 lincRNA lincRNA MGP_WSBEiJ_T0008243.1 MGP_WSBEiJ_G0006698.1 mouse_genomes_project 5 128754412 128775563 + Gm42952 lincRNA lincRNA MGP_WSBEiJ_T0008244.1 MGP_WSBEiJ_G0006698.1 mouse_genomes_project 5 128754426 128768623 + Gm42952 lincRNA lincRNA MGP_WSBEiJ_T0014477.1 MGP_WSBEiJ_G0012607.1 mouse_genomes_project 5 23995683 23997496 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072147.1 MGP_WSBEiJ_G0029082.1 mouse_genomes_project 5 113812357 113826106 + MGP_WSBEiJ_P0072147 Crybb1 protein_coding protein_coding MGP_WSBEiJ_T0072148.1 MGP_WSBEiJ_G0029082.1 mouse_genomes_project 5 113812387 113825978 + MGP_WSBEiJ_P0072148 Crybb1 protein_coding protein_coding MGP_WSBEiJ_T0072149.1 MGP_WSBEiJ_G0029082.1 mouse_genomes_project 5 113812416 113826023 + MGP_WSBEiJ_P0072149 Crybb1 protein_coding protein_coding MGP_WSBEiJ_T0001595.1 MGP_WSBEiJ_G0001518.1 mouse_genomes_project 5 64722155 64724974 + TEC TEC MGP_WSBEiJ_T0004690.1 MGP_WSBEiJ_G0004047.1 mouse_genomes_project 5 111559402 111560038 - Gm43136 antisense antisense MGP_WSBEiJ_T0014725.1 MGP_WSBEiJ_G0012855.1 mouse_genomes_project 5 141520661 141521403 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001758.1 MGP_WSBEiJ_G0001680.1 mouse_genomes_project 5 123553557 123556817 - TEC TEC MGP_WSBEiJ_T0074434.1 MGP_WSBEiJ_G0029500.1 mouse_genomes_project 5 147273736 147288051 + MGP_WSBEiJ_P0074434 Zfp12 protein_coding protein_coding MGP_WSBEiJ_T0074435.1 MGP_WSBEiJ_G0029500.1 mouse_genomes_project 5 147273747 147288937 + MGP_WSBEiJ_P0074435 Zfp12 protein_coding protein_coding MGP_WSBEiJ_T0074436.1 MGP_WSBEiJ_G0029500.1 mouse_genomes_project 5 147273820 147288059 + MGP_WSBEiJ_P0074436 Zfp12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074437.1 MGP_WSBEiJ_G0029500.1 mouse_genomes_project 5 147274352 147280183 + MGP_WSBEiJ_P0074437 Zfp12 protein_coding protein_coding MGP_WSBEiJ_T0074438.1 MGP_WSBEiJ_G0029500.1 mouse_genomes_project 5 147280141 147284733 + Zfp12 protein_coding processed_transcript MGP_WSBEiJ_T0008340.1 MGP_WSBEiJ_G0006768.1 mouse_genomes_project 5 154445916 154448609 - Gm43450 lincRNA lincRNA MGP_WSBEiJ_T0008079.1 MGP_WSBEiJ_G0006593.1 mouse_genomes_project 5 97559566 97560725 - Gm9484 lincRNA lincRNA MGP_WSBEiJ_T0069025.1 MGP_WSBEiJ_G0028490.1 mouse_genomes_project 5 11606980 11973932 + MGP_WSBEiJ_P0069025 Pclo protein_coding protein_coding MGP_WSBEiJ_T0069026.1 MGP_WSBEiJ_G0028490.1 mouse_genomes_project 5 11606980 11907739 + MGP_WSBEiJ_P0069026 Pclo protein_coding protein_coding MGP_WSBEiJ_T0069027.1 MGP_WSBEiJ_G0028490.1 mouse_genomes_project 5 11607055 11970151 + Pclo protein_coding retained_intron MGP_WSBEiJ_T0069028.1 MGP_WSBEiJ_G0028490.1 mouse_genomes_project 5 11777218 11907750 + MGP_WSBEiJ_P0069028 Pclo protein_coding protein_coding MGP_WSBEiJ_T0073773.1 MGP_WSBEiJ_G0029371.1 mouse_genomes_project 5 139403552 139419770 - MGP_WSBEiJ_P0073773 Ssc4d protein_coding protein_coding MGP_WSBEiJ_T0073774.1 MGP_WSBEiJ_G0029371.1 mouse_genomes_project 5 139403564 139419736 - MGP_WSBEiJ_P0073774 Ssc4d protein_coding protein_coding MGP_WSBEiJ_T0073775.1 MGP_WSBEiJ_G0029371.1 mouse_genomes_project 5 139403565 139405670 - MGP_WSBEiJ_P0073775 Ssc4d protein_coding protein_coding MGP_WSBEiJ_T0073776.1 MGP_WSBEiJ_G0029371.1 mouse_genomes_project 5 139404168 139405618 - MGP_WSBEiJ_P0073776 Ssc4d protein_coding protein_coding MGP_WSBEiJ_T0073777.1 MGP_WSBEiJ_G0029371.1 mouse_genomes_project 5 139406830 139410004 - MGP_WSBEiJ_P0073777 Ssc4d protein_coding protein_coding MGP_WSBEiJ_T0073778.1 MGP_WSBEiJ_G0029371.1 mouse_genomes_project 5 139407040 139412348 - MGP_WSBEiJ_P0073778 Ssc4d protein_coding protein_coding MGP_WSBEiJ_T0073779.1 MGP_WSBEiJ_G0029371.1 mouse_genomes_project 5 139410268 139419679 - MGP_WSBEiJ_P0073779 Ssc4d protein_coding protein_coding MGP_WSBEiJ_T0001812.1 MGP_WSBEiJ_G0001733.1 mouse_genomes_project 5 134832342 134833497 - TEC TEC MGP_WSBEiJ_T0014625.1 MGP_WSBEiJ_G0012755.1 mouse_genomes_project 5 90434555 90435002 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074020.1 MGP_WSBEiJ_G0029413.1 mouse_genomes_project 5 141205564 141217341 + MGP_WSBEiJ_P0074020 protein_coding protein_coding MGP_WSBEiJ_T0074021.1 MGP_WSBEiJ_G0029413.1 mouse_genomes_project 5 141205586 141213071 + protein_coding retained_intron MGP_WSBEiJ_T0074022.1 MGP_WSBEiJ_G0029413.1 mouse_genomes_project 5 141205595 141213886 + MGP_WSBEiJ_P0074022 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074024.1 MGP_WSBEiJ_G0029413.1 mouse_genomes_project 5 141205621 141217346 + MGP_WSBEiJ_P0074024 protein_coding protein_coding MGP_WSBEiJ_T0074025.1 MGP_WSBEiJ_G0029413.1 mouse_genomes_project 5 141205621 141210339 + MGP_WSBEiJ_P0074025 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074026.1 MGP_WSBEiJ_G0029413.1 mouse_genomes_project 5 141206573 141216440 + MGP_WSBEiJ_P0074026 protein_coding protein_coding MGP_WSBEiJ_T0074027.1 MGP_WSBEiJ_G0029413.1 mouse_genomes_project 5 141214591 141215623 + MGP_WSBEiJ_P0074027 protein_coding protein_coding MGP_WSBEiJ_T0074028.1 MGP_WSBEiJ_G0029413.1 mouse_genomes_project 5 141215625 141216499 + MGP_WSBEiJ_P0074028 protein_coding protein_coding MGP_WSBEiJ_T0004563.1 MGP_WSBEiJ_G0003951.1 mouse_genomes_project 5 19297417 19344000 + Gm10475 antisense antisense MGP_WSBEiJ_T0071569.1 MGP_WSBEiJ_G0028966.1 mouse_genomes_project 5 99870851 99909134 - MGP_WSBEiJ_P0071569 protein_coding protein_coding MGP_WSBEiJ_T0071570.1 MGP_WSBEiJ_G0028966.1 mouse_genomes_project 5 99870851 99909134 - MGP_WSBEiJ_P0071570 protein_coding protein_coding MGP_WSBEiJ_T0071571.1 MGP_WSBEiJ_G0028966.1 mouse_genomes_project 5 99872199 99896658 - MGP_WSBEiJ_P0071571 protein_coding protein_coding MGP_WSBEiJ_T0071572.1 MGP_WSBEiJ_G0028966.1 mouse_genomes_project 5 99881219 99887492 - protein_coding retained_intron MGP_WSBEiJ_T0001408.1 MGP_WSBEiJ_G0001336.1 mouse_genomes_project 5 9045705 9052971 - TEC TEC MGP_WSBEiJ_T0072764.1 MGP_WSBEiJ_G0029205.1 mouse_genomes_project 5 123840092 123920443 + MGP_WSBEiJ_P0072764 Tmem116 protein_coding protein_coding MGP_WSBEiJ_T0072765.1 MGP_WSBEiJ_G0029205.1 mouse_genomes_project 5 123840774 123883661 + MGP_WSBEiJ_P0072765 Tmem116 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072766.1 MGP_WSBEiJ_G0029205.1 mouse_genomes_project 5 123840774 123884620 + MGP_WSBEiJ_P0072766 Tmem116 protein_coding protein_coding MGP_WSBEiJ_T0072767.1 MGP_WSBEiJ_G0029205.1 mouse_genomes_project 5 123840818 123871763 + MGP_WSBEiJ_P0072767 Tmem116 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072768.1 MGP_WSBEiJ_G0029205.1 mouse_genomes_project 5 123840899 123871763 + Tmem116 protein_coding processed_transcript MGP_WSBEiJ_T0072769.1 MGP_WSBEiJ_G0029205.1 mouse_genomes_project 5 123851089 123884627 + MGP_WSBEiJ_P0072769 Tmem116 protein_coding protein_coding MGP_WSBEiJ_T0072770.1 MGP_WSBEiJ_G0029205.1 mouse_genomes_project 5 123851160 123884632 + MGP_WSBEiJ_P0072770 Tmem116 protein_coding protein_coding MGP_WSBEiJ_T0014668.1 MGP_WSBEiJ_G0012798.1 mouse_genomes_project 5 110004806 110006209 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014743.1 MGP_WSBEiJ_G0012873.1 mouse_genomes_project 5 147508645 147509182 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071358.1 MGP_WSBEiJ_G0028914.1 mouse_genomes_project 5 91086420 91088567 + Cxcl5 protein_coding retained_intron MGP_WSBEiJ_T0071359.1 MGP_WSBEiJ_G0028914.1 mouse_genomes_project 5 91086438 91088567 + MGP_WSBEiJ_P0071359 Cxcl5 protein_coding protein_coding MGP_WSBEiJ_T0014679.1 MGP_WSBEiJ_G0012809.1 mouse_genomes_project 5 112140698 112142390 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001774.1 MGP_WSBEiJ_G0001696.1 mouse_genomes_project 5 125722990 125724554 + TEC TEC MGP_WSBEiJ_T0074292.1 MGP_WSBEiJ_G0029468.1 mouse_genomes_project 5 143596629 143614771 - MGP_WSBEiJ_P0074292 Gm26938 protein_coding protein_coding MGP_WSBEiJ_T0001808.1 MGP_WSBEiJ_G0001729.1 mouse_genomes_project 5 134738138 134739888 - TEC TEC MGP_WSBEiJ_T0011396.1 MGP_WSBEiJ_G0009553.1 mouse_genomes_project 5 79358171 79358462 - Gm22553 misc_RNA misc_RNA MGP_WSBEiJ_T0008318.1 MGP_WSBEiJ_G0006755.1 mouse_genomes_project 5 153451219 153452626 + 8430423G03Rik lincRNA lincRNA MGP_WSBEiJ_T0073901.1 MGP_WSBEiJ_G0029392.1 mouse_genomes_project 5 140575476 140586490 - MGP_WSBEiJ_P0073901 Ap1s1 protein_coding protein_coding MGP_WSBEiJ_T0073902.1 MGP_WSBEiJ_G0029392.1 mouse_genomes_project 5 140575825 140578131 - Ap1s1 protein_coding retained_intron MGP_WSBEiJ_T0073903.1 MGP_WSBEiJ_G0029392.1 mouse_genomes_project 5 140577859 140586150 - MGP_WSBEiJ_P0073903 Ap1s1 protein_coding protein_coding MGP_WSBEiJ_T0073904.1 MGP_WSBEiJ_G0029392.1 mouse_genomes_project 5 140577876 140586397 - MGP_WSBEiJ_P0073904 Ap1s1 protein_coding protein_coding MGP_WSBEiJ_T0073905.1 MGP_WSBEiJ_G0029392.1 mouse_genomes_project 5 140583423 140585762 - MGP_WSBEiJ_P0073905 Ap1s1 protein_coding protein_coding MGP_WSBEiJ_T0008040.1 MGP_WSBEiJ_G0006559.1 mouse_genomes_project 5 74384362 74401219 + Gm6116 lincRNA lincRNA MGP_WSBEiJ_T0014662.1 MGP_WSBEiJ_G0012792.1 mouse_genomes_project 5 108952334 108952620 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004811.1 MGP_WSBEiJ_G0004132.1 mouse_genomes_project 5 153447582 153449836 - Gm15410 antisense antisense MGP_WSBEiJ_T0072889.1 MGP_WSBEiJ_G0029225.1 mouse_genomes_project 5 124913627 124923592 + MGP_WSBEiJ_P0072889 Vps29 protein_coding protein_coding MGP_WSBEiJ_T0072890.1 MGP_WSBEiJ_G0029225.1 mouse_genomes_project 5 124913648 124922798 + MGP_WSBEiJ_P0072890 Vps29 protein_coding protein_coding MGP_WSBEiJ_T0072891.1 MGP_WSBEiJ_G0029225.1 mouse_genomes_project 5 124913651 124922543 + Vps29 protein_coding processed_transcript MGP_WSBEiJ_T0072892.1 MGP_WSBEiJ_G0029225.1 mouse_genomes_project 5 124913664 124923517 + MGP_WSBEiJ_P0072892 Vps29 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072893.1 MGP_WSBEiJ_G0029225.1 mouse_genomes_project 5 124913682 124922492 + MGP_WSBEiJ_P0072893 Vps29 protein_coding protein_coding MGP_WSBEiJ_T0072894.1 MGP_WSBEiJ_G0029225.1 mouse_genomes_project 5 124913702 124922574 + MGP_WSBEiJ_P0072894 Vps29 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072895.1 MGP_WSBEiJ_G0029225.1 mouse_genomes_project 5 124913716 124925105 + MGP_WSBEiJ_P0072895 Vps29 protein_coding protein_coding MGP_WSBEiJ_T0072896.1 MGP_WSBEiJ_G0029225.1 mouse_genomes_project 5 124917932 124921296 + Vps29 protein_coding retained_intron MGP_WSBEiJ_T0001664.1 MGP_WSBEiJ_G0001586.1 mouse_genomes_project 5 81328355 81329302 + TEC TEC MGP_WSBEiJ_T0073962.1 MGP_WSBEiJ_G0029404.1 mouse_genomes_project 5 141039236 141042034 - MGP_WSBEiJ_P0073962 Epo protein_coding protein_coding MGP_WSBEiJ_T0073963.1 MGP_WSBEiJ_G0029404.1 mouse_genomes_project 5 141039236 141095646 - MGP_WSBEiJ_P0073963 Epo protein_coding protein_coding MGP_WSBEiJ_T0073964.1 MGP_WSBEiJ_G0029404.1 mouse_genomes_project 5 141039242 141042034 - MGP_WSBEiJ_P0073964 Epo protein_coding protein_coding MGP_WSBEiJ_T0014703.1 MGP_WSBEiJ_G0012833.1 mouse_genomes_project 5 125273305 125273704 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073454.1 MGP_WSBEiJ_G0029317.1 mouse_genomes_project 5 133106273 133169730 + MGP_WSBEiJ_P0073454 Tpst1 protein_coding protein_coding MGP_WSBEiJ_T0073455.1 MGP_WSBEiJ_G0029317.1 mouse_genomes_project 5 133112333 133169730 + MGP_WSBEiJ_P0073455 Tpst1 protein_coding protein_coding MGP_WSBEiJ_T0073456.1 MGP_WSBEiJ_G0029317.1 mouse_genomes_project 5 133126560 133135012 + MGP_WSBEiJ_P0073456 Tpst1 protein_coding protein_coding MGP_WSBEiJ_T0073457.1 MGP_WSBEiJ_G0029317.1 mouse_genomes_project 5 133167957 133169713 + Tpst1 protein_coding retained_intron MGP_WSBEiJ_T0010523.1 MGP_WSBEiJ_G0008680.1 mouse_genomes_project 5 87691385 87691477 - Mir3969 miRNA miRNA MGP_WSBEiJ_T0071933.1 MGP_WSBEiJ_G0029042.1 mouse_genomes_project 5 109626054 109659609 + MGP_WSBEiJ_P0071933 Pcgf3 protein_coding protein_coding MGP_WSBEiJ_T0071934.1 MGP_WSBEiJ_G0029042.1 mouse_genomes_project 5 109626054 109675455 + MGP_WSBEiJ_P0071934 Pcgf3 protein_coding protein_coding MGP_WSBEiJ_T0071935.1 MGP_WSBEiJ_G0029042.1 mouse_genomes_project 5 109626135 109656849 + MGP_WSBEiJ_P0071935 Pcgf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071936.1 MGP_WSBEiJ_G0029042.1 mouse_genomes_project 5 109641700 109648299 + Pcgf3 protein_coding retained_intron MGP_WSBEiJ_T0071937.1 MGP_WSBEiJ_G0029042.1 mouse_genomes_project 5 109656897 109664796 + Pcgf3 protein_coding retained_intron MGP_WSBEiJ_T0071635.1 MGP_WSBEiJ_G0028976.1 mouse_genomes_project 5 101298055 101317383 - MGP_WSBEiJ_P0071635 Plac8 protein_coding protein_coding MGP_WSBEiJ_T0071636.1 MGP_WSBEiJ_G0028976.1 mouse_genomes_project 5 101298056 101307131 - MGP_WSBEiJ_P0071636 Plac8 protein_coding protein_coding MGP_WSBEiJ_T0071637.1 MGP_WSBEiJ_G0028976.1 mouse_genomes_project 5 101298057 101307696 - MGP_WSBEiJ_P0071637 Plac8 protein_coding protein_coding MGP_WSBEiJ_T0071638.1 MGP_WSBEiJ_G0028976.1 mouse_genomes_project 5 101306709 101317330 - Plac8 protein_coding retained_intron MGP_WSBEiJ_T0008048.1 MGP_WSBEiJ_G0006566.1 mouse_genomes_project 5 75546163 75560447 + Gm32780 lincRNA lincRNA MGP_WSBEiJ_T0014731.1 MGP_WSBEiJ_G0012861.1 mouse_genomes_project 5 142997332 142999163 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010502.1 MGP_WSBEiJ_G0008659.1 mouse_genomes_project 5 31848720 31848782 - Mir7024 miRNA miRNA MGP_WSBEiJ_T0014649.1 MGP_WSBEiJ_G0012779.1 mouse_genomes_project 5 104869644 104869866 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070242.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36304101 36314340 + MGP_WSBEiJ_P0070242 Lyar protein_coding protein_coding MGP_WSBEiJ_T0070243.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36304139 36311552 + MGP_WSBEiJ_P0070243 Lyar protein_coding protein_coding MGP_WSBEiJ_T0070244.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36304139 36317943 + MGP_WSBEiJ_P0070244 Lyar protein_coding protein_coding MGP_WSBEiJ_T0070245.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36304146 36314341 + MGP_WSBEiJ_P0070245 Lyar protein_coding protein_coding MGP_WSBEiJ_T0070246.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36304148 36314625 + MGP_WSBEiJ_P0070246 Lyar protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070247.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36304169 36309550 + MGP_WSBEiJ_P0070247 Lyar protein_coding protein_coding MGP_WSBEiJ_T0070248.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36304173 36311736 + MGP_WSBEiJ_P0070248 Lyar protein_coding protein_coding MGP_WSBEiJ_T0070249.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36306600 36314320 + MGP_WSBEiJ_P0070249 Lyar protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070250.1 MGP_WSBEiJ_G0028697.1 mouse_genomes_project 5 36308284 36310097 + Lyar protein_coding retained_intron MGP_WSBEiJ_T0068882.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2517956 2605437 - MGP_WSBEiJ_P0068882 Cfap69 protein_coding protein_coding MGP_WSBEiJ_T0068883.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2517960 2605406 - MGP_WSBEiJ_P0068883 Cfap69 protein_coding protein_coding MGP_WSBEiJ_T0068884.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2519670 2565063 - Cfap69 protein_coding processed_transcript MGP_WSBEiJ_T0068885.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2519726 2521190 - MGP_WSBEiJ_P0068885 Cfap69 protein_coding protein_coding MGP_WSBEiJ_T0068886.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2519816 2525890 - MGP_WSBEiJ_P0068886 Cfap69 protein_coding protein_coding MGP_WSBEiJ_T0068887.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2519859 2560170 - MGP_WSBEiJ_P0068887 Cfap69 protein_coding protein_coding MGP_WSBEiJ_T0068888.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2525034 2605241 - MGP_WSBEiJ_P0068888 Cfap69 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068889.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2527853 2605406 - MGP_WSBEiJ_P0068889 Cfap69 protein_coding protein_coding MGP_WSBEiJ_T0068890.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2532330 2605430 - MGP_WSBEiJ_P0068890 Cfap69 protein_coding protein_coding MGP_WSBEiJ_T0068891.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2569406 2569780 - Cfap69 protein_coding retained_intron MGP_WSBEiJ_T0068892.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2586643 2605425 - Cfap69 protein_coding retained_intron MGP_WSBEiJ_T0068893.1 MGP_WSBEiJ_G0028468.1 mouse_genomes_project 5 2590380 2603752 - MGP_WSBEiJ_P0068893 Cfap69 protein_coding protein_coding MGP_WSBEiJ_T0073792.1 MGP_WSBEiJ_G0029375.1 mouse_genomes_project 5 139503835 139514920 + Upk3bl protein_coding processed_transcript MGP_WSBEiJ_T0073793.1 MGP_WSBEiJ_G0029375.1 mouse_genomes_project 5 139506614 139514920 + MGP_WSBEiJ_P0073793 Upk3bl protein_coding protein_coding MGP_WSBEiJ_T0073794.1 MGP_WSBEiJ_G0029375.1 mouse_genomes_project 5 139506690 139514915 + MGP_WSBEiJ_P0073794 Upk3bl protein_coding protein_coding MGP_WSBEiJ_T0073795.1 MGP_WSBEiJ_G0029375.1 mouse_genomes_project 5 139506690 139514922 + MGP_WSBEiJ_P0073795 Upk3bl protein_coding protein_coding MGP_WSBEiJ_T0073796.1 MGP_WSBEiJ_G0029375.1 mouse_genomes_project 5 139509486 139514906 + Upk3bl protein_coding processed_transcript MGP_WSBEiJ_T0073797.1 MGP_WSBEiJ_G0029375.1 mouse_genomes_project 5 139509559 139514908 + MGP_WSBEiJ_P0073797 Upk3bl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001558.1 MGP_WSBEiJ_G0001482.1 mouse_genomes_project 5 52433441 52435212 + TEC TEC MGP_WSBEiJ_T0073386.1 MGP_WSBEiJ_G0029303.1 mouse_genomes_project 5 132604185 132633805 + MGP_WSBEiJ_P0073386 Mmp17 protein_coding protein_coding MGP_WSBEiJ_T0073387.1 MGP_WSBEiJ_G0029303.1 mouse_genomes_project 5 132618311 132625308 + Mmp17 protein_coding retained_intron MGP_WSBEiJ_T0007979.1 MGP_WSBEiJ_G0006509.1 mouse_genomes_project 5 36430818 36435607 + 4930487D11Rik lincRNA lincRNA MGP_WSBEiJ_T0014438.1 MGP_WSBEiJ_G0012568.1 mouse_genomes_project 5 14672063 14673126 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098379.1 MGP_WSBEiJ_G0037042.1 mouse_genomes_project 5 117382308 117382449 + Gm24265 snRNA snRNA MGP_WSBEiJ_T0004635.1 MGP_WSBEiJ_G0004010.1 mouse_genomes_project 5 72517129 72518001 + 1700071G01Rik antisense antisense MGP_WSBEiJ_T0004734.1 MGP_WSBEiJ_G0004077.1 mouse_genomes_project 5 122880974 122882281 - Gm43579 antisense antisense MGP_WSBEiJ_T0008093.1 MGP_WSBEiJ_G0006603.1 mouse_genomes_project 5 100611324 100620556 + lincRNA lincRNA MGP_WSBEiJ_T0072797.1 MGP_WSBEiJ_G0029212.1 mouse_genomes_project 5 124027932 124087131 - MGP_WSBEiJ_P0072797 Acad10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072798.1 MGP_WSBEiJ_G0029212.1 mouse_genomes_project 5 124027932 124081787 - MGP_WSBEiJ_P0072798 Acad10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072799.1 MGP_WSBEiJ_G0029212.1 mouse_genomes_project 5 124027938 124088783 - MGP_WSBEiJ_P0072799 Acad10 protein_coding protein_coding MGP_WSBEiJ_T0072800.1 MGP_WSBEiJ_G0029212.1 mouse_genomes_project 5 124027940 124088818 - MGP_WSBEiJ_P0072800 Acad10 protein_coding protein_coding MGP_WSBEiJ_T0072801.1 MGP_WSBEiJ_G0029212.1 mouse_genomes_project 5 124027941 124061235 - Acad10 protein_coding retained_intron MGP_WSBEiJ_T0072802.1 MGP_WSBEiJ_G0029212.1 mouse_genomes_project 5 124033506 124088802 - Acad10 protein_coding retained_intron MGP_WSBEiJ_T0069333.1 MGP_WSBEiJ_G0028547.1 mouse_genomes_project 5 22774747 22818950 + MGP_WSBEiJ_P0069333 Galntl5 protein_coding protein_coding MGP_WSBEiJ_T0069334.1 MGP_WSBEiJ_G0028547.1 mouse_genomes_project 5 22774789 22818948 + MGP_WSBEiJ_P0069334 Galntl5 protein_coding protein_coding MGP_WSBEiJ_T0074152.1 MGP_WSBEiJ_G0029442.1 mouse_genomes_project 5 141859368 141874394 - MGP_WSBEiJ_P0074152 Gm43720 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004716.1 MGP_WSBEiJ_G0004067.1 mouse_genomes_project 5 118202207 118204274 + antisense antisense MGP_WSBEiJ_T0008248.1 MGP_WSBEiJ_G0006701.1 mouse_genomes_project 5 129551535 129554494 - Gm43754 lincRNA lincRNA MGP_WSBEiJ_T0098331.1 MGP_WSBEiJ_G0036994.1 mouse_genomes_project 5 23113088 23113259 + Gm22656 snRNA snRNA MGP_WSBEiJ_T0014481.1 MGP_WSBEiJ_G0012611.1 mouse_genomes_project 5 24651216 24652898 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007986.1 MGP_WSBEiJ_G0006514.1 mouse_genomes_project 5 38141457 38152502 - Gm35191 lincRNA lincRNA MGP_WSBEiJ_T0001592.1 MGP_WSBEiJ_G0001515.1 mouse_genomes_project 5 64580297 64581217 + TEC TEC MGP_WSBEiJ_T0004673.1 MGP_WSBEiJ_G0004037.1 mouse_genomes_project 5 102664412 102673157 + Gm20548 antisense antisense MGP_WSBEiJ_T0004674.1 MGP_WSBEiJ_G0004037.1 mouse_genomes_project 5 102664438 102671265 + Gm20548 antisense antisense MGP_WSBEiJ_T0004675.1 MGP_WSBEiJ_G0004037.1 mouse_genomes_project 5 102664448 102671228 + Gm20548 antisense antisense MGP_WSBEiJ_T0004676.1 MGP_WSBEiJ_G0004037.1 mouse_genomes_project 5 102664454 102673368 + Gm20548 antisense antisense MGP_WSBEiJ_T0004677.1 MGP_WSBEiJ_G0004037.1 mouse_genomes_project 5 102667142 102671320 + Gm20548 antisense antisense MGP_WSBEiJ_T0071763.1 MGP_WSBEiJ_G0029007.1 mouse_genomes_project 5 106050488 106062355 - MGP_WSBEiJ_P0071763 protein_coding protein_coding MGP_WSBEiJ_T0071706.1 MGP_WSBEiJ_G0028988.1 mouse_genomes_project 5 104273719 104399005 + Ptpn13 protein_coding retained_intron MGP_WSBEiJ_T0071707.1 MGP_WSBEiJ_G0028988.1 mouse_genomes_project 5 104273767 104387379 + MGP_WSBEiJ_P0071707 Ptpn13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071708.1 MGP_WSBEiJ_G0028988.1 mouse_genomes_project 5 104273783 104359845 + Ptpn13 protein_coding retained_intron MGP_WSBEiJ_T0071709.1 MGP_WSBEiJ_G0028988.1 mouse_genomes_project 5 104273939 104457801 + MGP_WSBEiJ_P0071709 Ptpn13 protein_coding protein_coding MGP_WSBEiJ_T0071710.1 MGP_WSBEiJ_G0028988.1 mouse_genomes_project 5 104387204 104400910 + Ptpn13 protein_coding retained_intron MGP_WSBEiJ_T0072241.1 MGP_WSBEiJ_G0029102.1 mouse_genomes_project 5 115421090 115451311 - MGP_WSBEiJ_P0072241 Sart3 protein_coding protein_coding MGP_WSBEiJ_T0072242.1 MGP_WSBEiJ_G0029102.1 mouse_genomes_project 5 115421092 115450450 - MGP_WSBEiJ_P0072242 Sart3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072243.1 MGP_WSBEiJ_G0029102.1 mouse_genomes_project 5 115423322 115424240 - Sart3 protein_coding retained_intron MGP_WSBEiJ_T0072244.1 MGP_WSBEiJ_G0029102.1 mouse_genomes_project 5 115424414 115434275 - Sart3 protein_coding processed_transcript MGP_WSBEiJ_T0072245.1 MGP_WSBEiJ_G0029102.1 mouse_genomes_project 5 115433066 115433590 - Sart3 protein_coding processed_transcript MGP_WSBEiJ_T0072246.1 MGP_WSBEiJ_G0029102.1 mouse_genomes_project 5 115433812 115437047 - Sart3 protein_coding retained_intron MGP_WSBEiJ_T0072247.1 MGP_WSBEiJ_G0029102.1 mouse_genomes_project 5 115434239 115440087 - Sart3 protein_coding processed_transcript MGP_WSBEiJ_T0073449.1 MGP_WSBEiJ_G0029316.1 mouse_genomes_project 5 133059391 133092247 + MGP_WSBEiJ_P0073449 Crcp protein_coding protein_coding MGP_WSBEiJ_T0073450.1 MGP_WSBEiJ_G0029316.1 mouse_genomes_project 5 133059408 133092290 + Crcp protein_coding processed_transcript MGP_WSBEiJ_T0073451.1 MGP_WSBEiJ_G0029316.1 mouse_genomes_project 5 133059423 133092108 + Crcp protein_coding processed_transcript MGP_WSBEiJ_T0073452.1 MGP_WSBEiJ_G0029316.1 mouse_genomes_project 5 133059480 133092030 + MGP_WSBEiJ_P0073452 Crcp protein_coding protein_coding MGP_WSBEiJ_T0073453.1 MGP_WSBEiJ_G0029316.1 mouse_genomes_project 5 133074387 133092586 + Crcp protein_coding processed_transcript MGP_WSBEiJ_T0074509.1 MGP_WSBEiJ_G0029517.1 mouse_genomes_project 5 147973583 147986942 + Rsph10b protein_coding processed_transcript MGP_WSBEiJ_T0074510.1 MGP_WSBEiJ_G0029517.1 mouse_genomes_project 5 147973610 148031904 + MGP_WSBEiJ_P0074510 Rsph10b protein_coding protein_coding MGP_WSBEiJ_T0074511.1 MGP_WSBEiJ_G0029517.1 mouse_genomes_project 5 147976831 148031908 + MGP_WSBEiJ_P0074511 Rsph10b protein_coding unknown_likely_coding MGP_WSBEiJ_T0074512.1 MGP_WSBEiJ_G0029517.1 mouse_genomes_project 5 147977631 147986939 + MGP_WSBEiJ_P0074512 Rsph10b protein_coding protein_coding MGP_WSBEiJ_T0074513.1 MGP_WSBEiJ_G0029517.1 mouse_genomes_project 5 148027348 148031713 + Rsph10b protein_coding processed_transcript MGP_WSBEiJ_T0074519.1 MGP_WSBEiJ_G0029519.1 mouse_genomes_project 5 148071811 148078607 - MGP_WSBEiJ_P0074519 Ocm protein_coding protein_coding MGP_WSBEiJ_T0074520.1 MGP_WSBEiJ_G0029519.1 mouse_genomes_project 5 148072083 148077714 - MGP_WSBEiJ_P0074520 Ocm protein_coding protein_coding MGP_WSBEiJ_T0074521.1 MGP_WSBEiJ_G0029519.1 mouse_genomes_project 5 148076447 148078678 - MGP_WSBEiJ_P0074521 Ocm protein_coding protein_coding MGP_WSBEiJ_T0014737.1 MGP_WSBEiJ_G0012867.1 mouse_genomes_project 5 146237897 146238860 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098336.1 MGP_WSBEiJ_G0036999.1 mouse_genomes_project 5 32108840 32108943 + Gm25918 snRNA snRNA MGP_WSBEiJ_T0069373.1 MGP_WSBEiJ_G0028556.1 mouse_genomes_project 5 25522607 25538913 + MGP_WSBEiJ_P0069373 Htr5a protein_coding protein_coding MGP_WSBEiJ_T0004614.1 MGP_WSBEiJ_G0003991.1 mouse_genomes_project 5 46921174 46931309 + Gm20700 antisense antisense MGP_WSBEiJ_T0014421.1 MGP_WSBEiJ_G0012551.1 mouse_genomes_project 5 4989640 4990055 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014657.1 MGP_WSBEiJ_G0012787.1 mouse_genomes_project 5 107669305 107670047 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001407.1 MGP_WSBEiJ_G0001335.1 mouse_genomes_project 5 7755170 7757011 - TEC TEC MGP_WSBEiJ_T0071208.1 MGP_WSBEiJ_G0028870.1 mouse_genomes_project 5 87484369 87501096 - MGP_WSBEiJ_P0071208 protein_coding protein_coding MGP_WSBEiJ_T0001651.1 MGP_WSBEiJ_G0001573.1 mouse_genomes_project 5 73502522 73503573 - TEC TEC MGP_WSBEiJ_T0070563.1 MGP_WSBEiJ_G0028754.1 mouse_genomes_project 5 63121263 63153190 + MGP_WSBEiJ_P0070563 Pgm1 protein_coding protein_coding MGP_WSBEiJ_T0070564.1 MGP_WSBEiJ_G0028754.1 mouse_genomes_project 5 63131756 63142105 + MGP_WSBEiJ_P0070564 Pgm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070565.1 MGP_WSBEiJ_G0028754.1 mouse_genomes_project 5 63137937 63139817 + Pgm1 protein_coding retained_intron MGP_WSBEiJ_T0070566.1 MGP_WSBEiJ_G0028754.1 mouse_genomes_project 5 63143568 63153003 + MGP_WSBEiJ_P0070566 Pgm1 protein_coding protein_coding MGP_WSBEiJ_T0011400.1 MGP_WSBEiJ_G0009557.1 mouse_genomes_project 5 101165861 101165930 + Gm27997 misc_RNA misc_RNA MGP_WSBEiJ_T0069787.1 MGP_WSBEiJ_G0028624.1 mouse_genomes_project 5 30302600 30340090 + MGP_WSBEiJ_P0069787 Ppp1cb protein_coding protein_coding MGP_WSBEiJ_T0069788.1 MGP_WSBEiJ_G0028624.1 mouse_genomes_project 5 30302909 30362834 + MGP_WSBEiJ_P0069788 Ppp1cb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069789.1 MGP_WSBEiJ_G0028624.1 mouse_genomes_project 5 30302943 30307501 + Ppp1cb protein_coding retained_intron MGP_WSBEiJ_T0069790.1 MGP_WSBEiJ_G0028624.1 mouse_genomes_project 5 30302979 30335606 + MGP_WSBEiJ_P0069790 Ppp1cb protein_coding protein_coding MGP_WSBEiJ_T0069791.1 MGP_WSBEiJ_G0028624.1 mouse_genomes_project 5 30322215 30329882 + Ppp1cb protein_coding processed_transcript MGP_WSBEiJ_T0069792.1 MGP_WSBEiJ_G0028624.1 mouse_genomes_project 5 30330539 30337327 + MGP_WSBEiJ_P0069792 Ppp1cb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001580.1 MGP_WSBEiJ_G0001504.1 mouse_genomes_project 5 61565008 61566066 - TEC TEC MGP_WSBEiJ_T0070986.1 MGP_WSBEiJ_G0028824.1 mouse_genomes_project 5 74512882 74515175 + MGP_WSBEiJ_P0070986 Gsx2 protein_coding protein_coding MGP_WSBEiJ_T0070987.1 MGP_WSBEiJ_G0028824.1 mouse_genomes_project 5 74512883 74514907 + MGP_WSBEiJ_P0070987 Gsx2 protein_coding protein_coding MGP_WSBEiJ_T0073067.1 MGP_WSBEiJ_G0029252.1 mouse_genomes_project 5 126189366 126236763 - MGP_WSBEiJ_P0073067 Vps33a protein_coding protein_coding MGP_WSBEiJ_T0073068.1 MGP_WSBEiJ_G0029252.1 mouse_genomes_project 5 126215650 126220657 - Vps33a protein_coding retained_intron MGP_WSBEiJ_T0073069.1 MGP_WSBEiJ_G0029252.1 mouse_genomes_project 5 126225187 126230742 - Vps33a protein_coding retained_intron MGP_WSBEiJ_T0073070.1 MGP_WSBEiJ_G0029252.1 mouse_genomes_project 5 126226889 126236704 - MGP_WSBEiJ_P0073070 Vps33a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014554.1 MGP_WSBEiJ_G0012684.1 mouse_genomes_project 5 58874662 58875483 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011401.1 MGP_WSBEiJ_G0009558.1 mouse_genomes_project 5 101168184 101168322 + Gm28030 misc_RNA misc_RNA MGP_WSBEiJ_T0014422.1 MGP_WSBEiJ_G0012552.1 mouse_genomes_project 5 5929699 5929894 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014726.1 MGP_WSBEiJ_G0012856.1 mouse_genomes_project 5 141614504 141615001 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008246.1 MGP_WSBEiJ_G0006700.1 mouse_genomes_project 5 129529070 129565624 + Gm43757 lincRNA lincRNA MGP_WSBEiJ_T0008247.1 MGP_WSBEiJ_G0006700.1 mouse_genomes_project 5 129529092 129535231 + Gm43757 lincRNA lincRNA MGP_WSBEiJ_T0001548.1 MGP_WSBEiJ_G0001472.1 mouse_genomes_project 5 50228636 50232676 - TEC TEC MGP_WSBEiJ_T0098374.1 MGP_WSBEiJ_G0037037.1 mouse_genomes_project 5 108392832 108392934 + Gm22557 snRNA snRNA MGP_WSBEiJ_T0074148.1 MGP_WSBEiJ_G0029441.1 mouse_genomes_project 5 141859337 141867256 - MGP_WSBEiJ_P0074148 Gal3st4 protein_coding protein_coding MGP_WSBEiJ_T0074149.1 MGP_WSBEiJ_G0029441.1 mouse_genomes_project 5 141859341 141867170 - MGP_WSBEiJ_P0074149 Gal3st4 protein_coding protein_coding MGP_WSBEiJ_T0074150.1 MGP_WSBEiJ_G0029441.1 mouse_genomes_project 5 141859354 141867217 - Gal3st4 protein_coding processed_transcript MGP_WSBEiJ_T0074151.1 MGP_WSBEiJ_G0029441.1 mouse_genomes_project 5 141859354 141867217 - MGP_WSBEiJ_P0074151 Gal3st4 protein_coding protein_coding MGP_WSBEiJ_T0074153.1 MGP_WSBEiJ_G0029441.1 mouse_genomes_project 5 141865408 141867165 - MGP_WSBEiJ_P0074153 Gal3st4 protein_coding protein_coding MGP_WSBEiJ_T0004697.1 MGP_WSBEiJ_G0004054.1 mouse_genomes_project 5 113939569 113942839 - Gm20636 antisense antisense MGP_WSBEiJ_T0097433.1 MGP_WSBEiJ_G0036105.1 mouse_genomes_project 5 148428290 148431418 + Dmrt1i sense_intronic sense_intronic MGP_WSBEiJ_T0097434.1 MGP_WSBEiJ_G0036105.1 mouse_genomes_project 5 148428892 148431375 + Dmrt1i sense_intronic sense_intronic MGP_WSBEiJ_T0097435.1 MGP_WSBEiJ_G0036105.1 mouse_genomes_project 5 148428892 148431375 + Dmrt1i sense_intronic sense_intronic MGP_WSBEiJ_T0098326.1 MGP_WSBEiJ_G0036989.1 mouse_genomes_project 5 17564971 17565071 + Gm22755 snRNA snRNA MGP_WSBEiJ_T0072568.1 MGP_WSBEiJ_G0029162.1 mouse_genomes_project 5 119098325 119122735 - MGP_WSBEiJ_P0072568 Suds3 protein_coding protein_coding MGP_WSBEiJ_T0072569.1 MGP_WSBEiJ_G0029162.1 mouse_genomes_project 5 119098330 119111039 - Suds3 protein_coding retained_intron MGP_WSBEiJ_T0072570.1 MGP_WSBEiJ_G0029162.1 mouse_genomes_project 5 119099082 119122850 - MGP_WSBEiJ_P0072570 Suds3 protein_coding protein_coding MGP_WSBEiJ_T0072571.1 MGP_WSBEiJ_G0029162.1 mouse_genomes_project 5 119101604 119105438 - Suds3 protein_coding retained_intron MGP_WSBEiJ_T0072572.1 MGP_WSBEiJ_G0029162.1 mouse_genomes_project 5 119111925 119120288 - Suds3 protein_coding retained_intron MGP_WSBEiJ_T0072573.1 MGP_WSBEiJ_G0029162.1 mouse_genomes_project 5 119111931 119116500 - Suds3 protein_coding retained_intron MGP_WSBEiJ_T0008302.1 MGP_WSBEiJ_G0006740.1 mouse_genomes_project 5 147846311 147849957 + D130017N08Rik lincRNA lincRNA MGP_WSBEiJ_T0001813.1 MGP_WSBEiJ_G0001734.1 mouse_genomes_project 5 134834854 134835987 - TEC TEC MGP_WSBEiJ_T0014655.1 MGP_WSBEiJ_G0012785.1 mouse_genomes_project 5 107314490 107315346 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008046.1 MGP_WSBEiJ_G0006564.1 mouse_genomes_project 5 75310480 75313904 - Gm19590 lincRNA lincRNA MGP_WSBEiJ_T0008140.1 MGP_WSBEiJ_G0006636.1 mouse_genomes_project 5 111822930 111825172 + Gm26711 lincRNA lincRNA MGP_WSBEiJ_T0098376.1 MGP_WSBEiJ_G0037039.1 mouse_genomes_project 5 112220220 112220327 + Gm22583 snRNA snRNA MGP_WSBEiJ_T0008191.1 MGP_WSBEiJ_G0006664.1 mouse_genomes_project 5 118252503 118256178 - Gm13838 lincRNA lincRNA MGP_WSBEiJ_T0008171.1 MGP_WSBEiJ_G0006651.1 mouse_genomes_project 5 114158507 114167879 - 1700034G24Rik lincRNA lincRNA MGP_WSBEiJ_T0008172.1 MGP_WSBEiJ_G0006651.1 mouse_genomes_project 5 114158596 114167879 - 1700034G24Rik lincRNA lincRNA MGP_WSBEiJ_T0070820.1 MGP_WSBEiJ_G0028794.1 mouse_genomes_project 5 70189323 70343586 - MGP_WSBEiJ_P0070820 Gabra2 protein_coding protein_coding MGP_WSBEiJ_T0070821.1 MGP_WSBEiJ_G0028794.1 mouse_genomes_project 5 70191582 70343546 - MGP_WSBEiJ_P0070821 Gabra2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070822.1 MGP_WSBEiJ_G0028794.1 mouse_genomes_project 5 70193708 70253216 - Gabra2 protein_coding retained_intron MGP_WSBEiJ_T0070823.1 MGP_WSBEiJ_G0028794.1 mouse_genomes_project 5 70193814 70342409 - MGP_WSBEiJ_P0070823 Gabra2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070824.1 MGP_WSBEiJ_G0028794.1 mouse_genomes_project 5 70208452 70342969 - Gabra2 protein_coding processed_transcript MGP_WSBEiJ_T0070825.1 MGP_WSBEiJ_G0028794.1 mouse_genomes_project 5 70339518 70342634 - Gabra2 protein_coding retained_intron MGP_WSBEiJ_T0010534.1 MGP_WSBEiJ_G0008691.1 mouse_genomes_project 5 114980797 114980853 - Mir7230 miRNA miRNA MGP_WSBEiJ_T0100855.1 MGP_WSBEiJ_G0039313.1 mouse_genomes_project 5 86866492 86869342 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004671.1 MGP_WSBEiJ_G0004035.1 mouse_genomes_project 5 101425324 101434064 + Gm15777 antisense antisense MGP_WSBEiJ_T0072721.1 MGP_WSBEiJ_G0029196.1 mouse_genomes_project 5 123152501 123163782 + MGP_WSBEiJ_P0072721 protein_coding protein_coding MGP_WSBEiJ_T0072723.1 MGP_WSBEiJ_G0029196.1 mouse_genomes_project 5 123152518 123163416 + MGP_WSBEiJ_P0072723 protein_coding protein_coding MGP_WSBEiJ_T0001776.1 MGP_WSBEiJ_G0001698.1 mouse_genomes_project 5 126029427 126031413 + TEC TEC MGP_WSBEiJ_T0001413.1 MGP_WSBEiJ_G0001341.1 mouse_genomes_project 5 10562888 10566915 + TEC TEC MGP_WSBEiJ_T0100112.1 MGP_WSBEiJ_G0038714.1 mouse_genomes_project 5 77122837 77123224 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100113.1 MGP_WSBEiJ_G0038714.1 mouse_genomes_project 5 77122853 77123408 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0014492.1 MGP_WSBEiJ_G0012622.1 mouse_genomes_project 5 27573591 27574811 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001754.1 MGP_WSBEiJ_G0001676.1 mouse_genomes_project 5 122469848 122470982 + TEC TEC MGP_WSBEiJ_T0097416.1 MGP_WSBEiJ_G0036090.1 mouse_genomes_project 5 100176749 100177488 - Gm16227 sense_intronic sense_intronic MGP_WSBEiJ_T0004785.1 MGP_WSBEiJ_G0004117.1 mouse_genomes_project 5 141455848 141456304 + Gm43495 antisense antisense MGP_WSBEiJ_T0068912.1 MGP_WSBEiJ_G0028474.1 mouse_genomes_project 5 4980591 5003427 + MGP_WSBEiJ_P0068912 Sri protein_coding protein_coding MGP_WSBEiJ_T0068913.1 MGP_WSBEiJ_G0028474.1 mouse_genomes_project 5 4991028 5003199 + MGP_WSBEiJ_P0068913 Sri protein_coding protein_coding MGP_WSBEiJ_T0068914.1 MGP_WSBEiJ_G0028474.1 mouse_genomes_project 5 4991059 4992357 + Sri protein_coding retained_intron MGP_WSBEiJ_T0068915.1 MGP_WSBEiJ_G0028474.1 mouse_genomes_project 5 4991063 4994223 + Sri protein_coding retained_intron MGP_WSBEiJ_T0068916.1 MGP_WSBEiJ_G0028474.1 mouse_genomes_project 5 4991109 4999119 + Sri protein_coding retained_intron MGP_WSBEiJ_T0068917.1 MGP_WSBEiJ_G0028474.1 mouse_genomes_project 5 4993843 5001796 + Sri protein_coding retained_intron MGP_WSBEiJ_T0068918.1 MGP_WSBEiJ_G0028474.1 mouse_genomes_project 5 4995774 4996980 + Sri protein_coding retained_intron MGP_WSBEiJ_T0008321.1 MGP_WSBEiJ_G0006757.1 mouse_genomes_project 5 153499915 153505090 - 5930430L01Rik lincRNA lincRNA MGP_WSBEiJ_T0008322.1 MGP_WSBEiJ_G0006757.1 mouse_genomes_project 5 153500941 153505082 - 5930430L01Rik lincRNA lincRNA MGP_WSBEiJ_T0010513.1 MGP_WSBEiJ_G0008670.1 mouse_genomes_project 5 63687217 63687336 - Gm25306 miRNA miRNA MGP_WSBEiJ_T0014566.1 MGP_WSBEiJ_G0012696.1 mouse_genomes_project 5 63215160 63216039 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074381.1 MGP_WSBEiJ_G0029489.1 mouse_genomes_project 5 146503093 146507332 - MGP_WSBEiJ_P0074381 Papolb protein_coding protein_coding MGP_WSBEiJ_T0072681.1 MGP_WSBEiJ_G0029185.1 mouse_genomes_project 5 122776278 122841592 - MGP_WSBEiJ_P0072681 Tpcn1 protein_coding protein_coding MGP_WSBEiJ_T0072682.1 MGP_WSBEiJ_G0029185.1 mouse_genomes_project 5 122792968 122841531 - Tpcn1 protein_coding retained_intron MGP_WSBEiJ_T0072683.1 MGP_WSBEiJ_G0029185.1 mouse_genomes_project 5 122834290 122841513 - Tpcn1 protein_coding retained_intron MGP_WSBEiJ_T0072684.1 MGP_WSBEiJ_G0029185.1 mouse_genomes_project 5 122840075 122841518 - Tpcn1 protein_coding retained_intron MGP_WSBEiJ_T0001459.1 MGP_WSBEiJ_G0001384.1 mouse_genomes_project 5 30303591 30306056 + TEC TEC MGP_WSBEiJ_T0014675.1 MGP_WSBEiJ_G0012805.1 mouse_genomes_project 5 110809480 110811495 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072775.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123921297 123942273 - MGP_WSBEiJ_P0072775 Mapkapk5 protein_coding protein_coding MGP_WSBEiJ_T0072776.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123921307 123941556 - MGP_WSBEiJ_P0072776 Mapkapk5 protein_coding protein_coding MGP_WSBEiJ_T0072777.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123921311 123923521 - Mapkapk5 protein_coding retained_intron MGP_WSBEiJ_T0072778.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123921311 123922098 - Mapkapk5 protein_coding retained_intron MGP_WSBEiJ_T0072779.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123921311 123923454 - MGP_WSBEiJ_P0072779 Mapkapk5 protein_coding protein_coding MGP_WSBEiJ_T0072780.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123921315 123934094 - Mapkapk5 protein_coding processed_transcript MGP_WSBEiJ_T0072781.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123921404 123941556 - MGP_WSBEiJ_P0072781 Mapkapk5 protein_coding protein_coding MGP_WSBEiJ_T0072782.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123921404 123941556 - MGP_WSBEiJ_P0072782 Mapkapk5 protein_coding protein_coding MGP_WSBEiJ_T0072783.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123922023 123941556 - Mapkapk5 protein_coding processed_transcript MGP_WSBEiJ_T0072784.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123922819 123928174 - Mapkapk5 protein_coding retained_intron MGP_WSBEiJ_T0072785.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123929715 123932224 - MGP_WSBEiJ_P0072785 Mapkapk5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072786.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123929910 123941587 - MGP_WSBEiJ_P0072786 Mapkapk5 protein_coding protein_coding MGP_WSBEiJ_T0072787.1 MGP_WSBEiJ_G0029209.1 mouse_genomes_project 5 123931001 123933557 - Mapkapk5 protein_coding processed_transcript MGP_WSBEiJ_T0017573.1 MGP_WSBEiJ_G0015025.1 mouse_genomes_project 5 73503498 73504754 + Dancr processed_transcript lincRNA MGP_WSBEiJ_T0017574.1 MGP_WSBEiJ_G0015025.1 mouse_genomes_project 5 73503504 73504753 + Dancr processed_transcript retained_intron MGP_WSBEiJ_T0014575.1 MGP_WSBEiJ_G0012705.1 mouse_genomes_project 5 65537527 65537795 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071089.1 MGP_WSBEiJ_G0028840.1 mouse_genomes_project 5 76573086 76578488 + MGP_WSBEiJ_P0071089 Arl9 protein_coding protein_coding MGP_WSBEiJ_T0071090.1 MGP_WSBEiJ_G0028840.1 mouse_genomes_project 5 76575511 76579617 + MGP_WSBEiJ_P0071090 Arl9 protein_coding protein_coding MGP_WSBEiJ_T0070532.1 MGP_WSBEiJ_G0028746.1 mouse_genomes_project 5 52515412 52643774 + MGP_WSBEiJ_P0070532 Stim2 protein_coding protein_coding MGP_WSBEiJ_T0070533.1 MGP_WSBEiJ_G0028746.1 mouse_genomes_project 5 52515656 52643783 + MGP_WSBEiJ_P0070533 Stim2 protein_coding protein_coding MGP_WSBEiJ_T0070534.1 MGP_WSBEiJ_G0028746.1 mouse_genomes_project 5 52597067 52627213 + Stim2 protein_coding processed_transcript MGP_WSBEiJ_T0070535.1 MGP_WSBEiJ_G0028746.1 mouse_genomes_project 5 52638575 52641304 + Stim2 protein_coding retained_intron MGP_WSBEiJ_T0070020.1 MGP_WSBEiJ_G0028658.1 mouse_genomes_project 5 32611879 32632786 - MGP_WSBEiJ_P0070020 Nop14 protein_coding protein_coding MGP_WSBEiJ_T0070021.1 MGP_WSBEiJ_G0028658.1 mouse_genomes_project 5 32614670 32620188 - MGP_WSBEiJ_P0070021 Nop14 protein_coding protein_coding MGP_WSBEiJ_T0070022.1 MGP_WSBEiJ_G0028658.1 mouse_genomes_project 5 32616995 32621452 - Nop14 protein_coding retained_intron MGP_WSBEiJ_T0074839.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155147249 155154493 + Brca2 protein_coding retained_intron MGP_WSBEiJ_T0074840.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155147249 155198774 + MGP_WSBEiJ_P0074840 Brca2 protein_coding protein_coding MGP_WSBEiJ_T0074841.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155147251 155163417 + Brca2 protein_coding retained_intron MGP_WSBEiJ_T0074842.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155147251 155166194 + MGP_WSBEiJ_P0074842 Brca2 protein_coding protein_coding MGP_WSBEiJ_T0074843.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155147263 155198775 + MGP_WSBEiJ_P0074843 Brca2 protein_coding protein_coding MGP_WSBEiJ_T0074844.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155147309 155151996 + Brca2 protein_coding processed_transcript MGP_WSBEiJ_T0074845.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155153837 155157055 + Brca2 protein_coding processed_transcript MGP_WSBEiJ_T0074846.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155179442 155181677 + Brca2 protein_coding retained_intron MGP_WSBEiJ_T0074847.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155180952 155185072 + Brca2 protein_coding retained_intron MGP_WSBEiJ_T0074848.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155183553 155185427 + Brca2 protein_coding retained_intron MGP_WSBEiJ_T0074849.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155185142 155188257 + Brca2 protein_coding retained_intron MGP_WSBEiJ_T0074850.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155195588 155198774 + Brca2 protein_coding processed_transcript MGP_WSBEiJ_T0074851.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155195869 155198360 + Brca2 protein_coding retained_intron MGP_WSBEiJ_T0074852.1 MGP_WSBEiJ_G0029585.1 mouse_genomes_project 5 155197635 155199357 + Brca2 protein_coding retained_intron MGP_WSBEiJ_T0073295.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128031635 128102137 - MGP_WSBEiJ_P0073295 Scarb1 protein_coding protein_coding MGP_WSBEiJ_T0073296.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128031637 128102114 - MGP_WSBEiJ_P0073296 Scarb1 protein_coding protein_coding MGP_WSBEiJ_T0073297.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128032114 128050625 - MGP_WSBEiJ_P0073297 Scarb1 protein_coding protein_coding MGP_WSBEiJ_T0073298.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128032335 128040755 - Scarb1 protein_coding processed_transcript MGP_WSBEiJ_T0073299.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128039545 128043251 - Scarb1 protein_coding retained_intron MGP_WSBEiJ_T0073300.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128039950 128102062 - Scarb1 protein_coding retained_intron MGP_WSBEiJ_T0073301.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128055382 128063934 - Scarb1 protein_coding retained_intron MGP_WSBEiJ_T0073302.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128058454 128075932 - Scarb1 protein_coding processed_transcript MGP_WSBEiJ_T0073303.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128062071 128101050 - MGP_WSBEiJ_P0073303 Scarb1 protein_coding protein_coding MGP_WSBEiJ_T0073304.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128063641 128086522 - Scarb1 protein_coding processed_transcript MGP_WSBEiJ_T0073305.1 MGP_WSBEiJ_G0029285.1 mouse_genomes_project 5 128085515 128087985 - Scarb1 protein_coding retained_intron MGP_WSBEiJ_T0004791.1 MGP_WSBEiJ_G0004119.1 mouse_genomes_project 5 142700204 142707733 + 6330403L08Rik antisense antisense MGP_WSBEiJ_T0004792.1 MGP_WSBEiJ_G0004119.1 mouse_genomes_project 5 142700204 142707732 + 6330403L08Rik antisense antisense MGP_WSBEiJ_T0072710.1 MGP_WSBEiJ_G0029192.1 mouse_genomes_project 5 122990711 123012382 - MGP_WSBEiJ_P0072710 Oas2 protein_coding protein_coding MGP_WSBEiJ_T0072711.1 MGP_WSBEiJ_G0029192.1 mouse_genomes_project 5 122990712 123012382 - MGP_WSBEiJ_P0072711 Oas2 protein_coding protein_coding MGP_WSBEiJ_T0072712.1 MGP_WSBEiJ_G0029192.1 mouse_genomes_project 5 122990714 122995939 - Oas2 protein_coding retained_intron MGP_WSBEiJ_T0072713.1 MGP_WSBEiJ_G0029192.1 mouse_genomes_project 5 122993668 123001111 - MGP_WSBEiJ_P0072713 Oas2 protein_coding protein_coding MGP_WSBEiJ_T0072735.1 MGP_WSBEiJ_G0029200.1 mouse_genomes_project 5 123578145 123583191 + MGP_WSBEiJ_P0072735 Rpl6 protein_coding protein_coding MGP_WSBEiJ_T0072736.1 MGP_WSBEiJ_G0029200.1 mouse_genomes_project 5 123578210 123578924 + Rpl6 protein_coding retained_intron MGP_WSBEiJ_T0072737.1 MGP_WSBEiJ_G0029200.1 mouse_genomes_project 5 123580582 123581329 + Rpl6 protein_coding retained_intron MGP_WSBEiJ_T0070336.1 MGP_WSBEiJ_G0028716.1 mouse_genomes_project 5 42184228 42187176 - MGP_WSBEiJ_P0070336 Fgfbp1 protein_coding protein_coding MGP_WSBEiJ_T0070337.1 MGP_WSBEiJ_G0028716.1 mouse_genomes_project 5 42184230 42187161 - MGP_WSBEiJ_P0070337 Fgfbp1 protein_coding protein_coding MGP_WSBEiJ_T0070338.1 MGP_WSBEiJ_G0028716.1 mouse_genomes_project 5 42184233 42186424 - MGP_WSBEiJ_P0070338 Fgfbp1 protein_coding protein_coding MGP_WSBEiJ_T0071275.1 MGP_WSBEiJ_G0028891.1 mouse_genomes_project 5 88502623 88502701 - MGP_WSBEiJ_P0071275 Gm11115 protein_coding protein_coding MGP_WSBEiJ_T0071418.1 MGP_WSBEiJ_G0028933.1 mouse_genomes_project 5 92614330 92645433 - MGP_WSBEiJ_P0071418 Ppef2 protein_coding protein_coding MGP_WSBEiJ_T0071419.1 MGP_WSBEiJ_G0028933.1 mouse_genomes_project 5 92614340 92617370 - Ppef2 protein_coding processed_transcript MGP_WSBEiJ_T0071420.1 MGP_WSBEiJ_G0028933.1 mouse_genomes_project 5 92614625 92642315 - MGP_WSBEiJ_P0071420 Ppef2 protein_coding protein_coding MGP_WSBEiJ_T0008045.1 MGP_WSBEiJ_G0006563.1 mouse_genomes_project 5 75226024 75231345 - Gm43100 lincRNA lincRNA MGP_WSBEiJ_T0010549.1 MGP_WSBEiJ_G0008706.1 mouse_genomes_project 5 138770671 138770752 - Mir7033 miRNA miRNA MGP_WSBEiJ_T0007930.1 MGP_WSBEiJ_G0006481.1 mouse_genomes_project 5 20858219 20892068 - lincRNA lincRNA MGP_WSBEiJ_T0007931.1 MGP_WSBEiJ_G0006481.1 mouse_genomes_project 5 20881180 20892041 - lincRNA lincRNA MGP_WSBEiJ_T0007932.1 MGP_WSBEiJ_G0006481.1 mouse_genomes_project 5 20890540 20892651 - lincRNA lincRNA MGP_WSBEiJ_T0007933.1 MGP_WSBEiJ_G0006481.1 mouse_genomes_project 5 20891017 20893001 - lincRNA lincRNA MGP_WSBEiJ_T0069733.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29318148 29320559 + Slc4a1ap protein_coding retained_intron MGP_WSBEiJ_T0069734.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29318148 29347503 + MGP_WSBEiJ_P0069734 Slc4a1ap protein_coding protein_coding MGP_WSBEiJ_T0069735.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29318150 29325603 + Slc4a1ap protein_coding retained_intron MGP_WSBEiJ_T0069736.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29318150 29347770 + MGP_WSBEiJ_P0069736 Slc4a1ap protein_coding protein_coding MGP_WSBEiJ_T0069737.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29318165 29347508 + MGP_WSBEiJ_P0069737 Slc4a1ap protein_coding protein_coding MGP_WSBEiJ_T0069738.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29318165 29327990 + MGP_WSBEiJ_P0069738 Slc4a1ap protein_coding protein_coding MGP_WSBEiJ_T0069739.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29318754 29323382 + Slc4a1ap protein_coding retained_intron MGP_WSBEiJ_T0069740.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29323126 29326144 + Slc4a1ap protein_coding retained_intron MGP_WSBEiJ_T0069741.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29327303 29347474 + MGP_WSBEiJ_P0069741 Slc4a1ap protein_coding protein_coding MGP_WSBEiJ_T0069742.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29334727 29347504 + Slc4a1ap protein_coding retained_intron MGP_WSBEiJ_T0069743.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29335609 29347508 + MGP_WSBEiJ_P0069743 Slc4a1ap protein_coding protein_coding MGP_WSBEiJ_T0069744.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29335687 29347433 + MGP_WSBEiJ_P0069744 Slc4a1ap protein_coding protein_coding MGP_WSBEiJ_T0069745.1 MGP_WSBEiJ_G0028618.1 mouse_genomes_project 5 29344020 29350243 + Slc4a1ap protein_coding processed_transcript MGP_WSBEiJ_T0071111.1 MGP_WSBEiJ_G0028848.1 mouse_genomes_project 5 77292359 77293579 + protein_coding processed_transcript MGP_WSBEiJ_T0014727.1 MGP_WSBEiJ_G0012857.1 mouse_genomes_project 5 141690652 141690854 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070091.1 MGP_WSBEiJ_G0028671.1 mouse_genomes_project 5 33656626 33685185 - MGP_WSBEiJ_P0070091 Htra3 protein_coding protein_coding MGP_WSBEiJ_T0070092.1 MGP_WSBEiJ_G0028671.1 mouse_genomes_project 5 33657611 33684933 - MGP_WSBEiJ_P0070092 Htra3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070093.1 MGP_WSBEiJ_G0028671.1 mouse_genomes_project 5 33667373 33685311 - MGP_WSBEiJ_P0070093 Htra3 protein_coding protein_coding MGP_WSBEiJ_T0070094.1 MGP_WSBEiJ_G0028671.1 mouse_genomes_project 5 33674011 33677414 - MGP_WSBEiJ_P0070094 Htra3 protein_coding protein_coding MGP_WSBEiJ_T0070095.1 MGP_WSBEiJ_G0028671.1 mouse_genomes_project 5 33684221 33685301 - Htra3 protein_coding retained_intron MGP_WSBEiJ_T0073168.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126826859 126926860 - MGP_WSBEiJ_P0073168 Pitpnm2 protein_coding protein_coding MGP_WSBEiJ_T0073169.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126826859 126962662 - MGP_WSBEiJ_P0073169 Pitpnm2 protein_coding protein_coding MGP_WSBEiJ_T0073170.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126826860 126959948 - MGP_WSBEiJ_P0073170 Pitpnm2 protein_coding protein_coding MGP_WSBEiJ_T0073171.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126827916 126895341 - MGP_WSBEiJ_P0073171 Pitpnm2 protein_coding protein_coding MGP_WSBEiJ_T0073172.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126828463 126832726 - Pitpnm2 protein_coding retained_intron MGP_WSBEiJ_T0073173.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126829265 126830291 - Pitpnm2 protein_coding retained_intron MGP_WSBEiJ_T0073174.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126833388 126834790 - Pitpnm2 protein_coding retained_intron MGP_WSBEiJ_T0073175.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126840959 126897906 - MGP_WSBEiJ_P0073175 Pitpnm2 protein_coding protein_coding MGP_WSBEiJ_T0073176.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126841132 126848418 - Pitpnm2 protein_coding retained_intron MGP_WSBEiJ_T0073177.1 MGP_WSBEiJ_G0029267.1 mouse_genomes_project 5 126851785 126893277 - MGP_WSBEiJ_P0073177 Pitpnm2 protein_coding protein_coding MGP_WSBEiJ_T0004687.1 MGP_WSBEiJ_G0004044.1 mouse_genomes_project 5 108734194 108738641 - A930041C12Rik antisense antisense MGP_WSBEiJ_T0001505.1 MGP_WSBEiJ_G0001430.1 mouse_genomes_project 5 43777223 43780979 + TEC TEC MGP_WSBEiJ_T0098395.1 MGP_WSBEiJ_G0037058.1 mouse_genomes_project 5 148063811 148063915 + Gm24311 snRNA snRNA MGP_WSBEiJ_T0072930.1 MGP_WSBEiJ_G0029232.1 mouse_genomes_project 5 125213545 125257767 + MGP_WSBEiJ_P0072930 P2rx7 protein_coding protein_coding MGP_WSBEiJ_T0072931.1 MGP_WSBEiJ_G0029232.1 mouse_genomes_project 5 125213545 125257759 + MGP_WSBEiJ_P0072931 P2rx7 protein_coding protein_coding MGP_WSBEiJ_T0072932.1 MGP_WSBEiJ_G0029232.1 mouse_genomes_project 5 125213573 125264903 + MGP_WSBEiJ_P0072932 P2rx7 protein_coding protein_coding MGP_WSBEiJ_T0072933.1 MGP_WSBEiJ_G0029232.1 mouse_genomes_project 5 125213643 125226086 + MGP_WSBEiJ_P0072933 P2rx7 protein_coding protein_coding MGP_WSBEiJ_T0072934.1 MGP_WSBEiJ_G0029232.1 mouse_genomes_project 5 125213799 125217436 + P2rx7 protein_coding processed_transcript MGP_WSBEiJ_T0072935.1 MGP_WSBEiJ_G0029232.1 mouse_genomes_project 5 125221243 125254879 + P2rx7 protein_coding processed_transcript MGP_WSBEiJ_T0072936.1 MGP_WSBEiJ_G0029232.1 mouse_genomes_project 5 125255447 125257017 + P2rx7 protein_coding processed_transcript MGP_WSBEiJ_T0072937.1 MGP_WSBEiJ_G0029232.1 mouse_genomes_project 5 125255687 125257754 + P2rx7 protein_coding retained_intron MGP_WSBEiJ_T0072031.1 MGP_WSBEiJ_G0029061.1 mouse_genomes_project 5 111581985 111638188 + MGP_WSBEiJ_P0072031 Golga3 protein_coding protein_coding MGP_WSBEiJ_T0072032.1 MGP_WSBEiJ_G0029061.1 mouse_genomes_project 5 111582141 111591594 + Golga3 protein_coding retained_intron MGP_WSBEiJ_T0072033.1 MGP_WSBEiJ_G0029061.1 mouse_genomes_project 5 111582163 111589659 + MGP_WSBEiJ_P0072033 Golga3 protein_coding protein_coding MGP_WSBEiJ_T0072034.1 MGP_WSBEiJ_G0029061.1 mouse_genomes_project 5 111582163 111634916 + MGP_WSBEiJ_P0072034 Golga3 protein_coding protein_coding MGP_WSBEiJ_T0072035.1 MGP_WSBEiJ_G0029061.1 mouse_genomes_project 5 111582181 111593508 + Golga3 protein_coding retained_intron MGP_WSBEiJ_T0001563.1 MGP_WSBEiJ_G0001487.1 mouse_genomes_project 5 56354112 56354267 + TEC TEC MGP_WSBEiJ_T0069859.1 MGP_WSBEiJ_G0028638.1 mouse_genomes_project 5 31550169 31569098 - MGP_WSBEiJ_P0069859 Slbp protein_coding protein_coding MGP_WSBEiJ_T0069860.1 MGP_WSBEiJ_G0028638.1 mouse_genomes_project 5 31555278 31569006 - MGP_WSBEiJ_P0069860 Slbp protein_coding unknown_likely_coding MGP_WSBEiJ_T0069861.1 MGP_WSBEiJ_G0028638.1 mouse_genomes_project 5 31555714 31557387 - Slbp protein_coding retained_intron MGP_WSBEiJ_T0069862.1 MGP_WSBEiJ_G0028638.1 mouse_genomes_project 5 31557165 31569091 - Slbp protein_coding retained_intron MGP_WSBEiJ_T0069863.1 MGP_WSBEiJ_G0028638.1 mouse_genomes_project 5 31558446 31569053 - MGP_WSBEiJ_P0069863 Slbp protein_coding protein_coding MGP_WSBEiJ_T0069864.1 MGP_WSBEiJ_G0028638.1 mouse_genomes_project 5 31561106 31569049 - MGP_WSBEiJ_P0069864 Slbp protein_coding protein_coding MGP_WSBEiJ_T0069865.1 MGP_WSBEiJ_G0028638.1 mouse_genomes_project 5 31562808 31569106 - Slbp protein_coding retained_intron MGP_WSBEiJ_T0069866.1 MGP_WSBEiJ_G0028638.1 mouse_genomes_project 5 31568378 31569054 - Slbp protein_coding retained_intron MGP_WSBEiJ_T0014545.1 MGP_WSBEiJ_G0012675.1 mouse_genomes_project 5 55919829 55921174 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001850.1 MGP_WSBEiJ_G0001770.1 mouse_genomes_project 5 144160171 144162394 - TEC TEC MGP_WSBEiJ_T0074362.1 MGP_WSBEiJ_G0029485.1 mouse_genomes_project 5 145149852 146166043 + MGP_WSBEiJ_P0074362 Sdk1 protein_coding protein_coding MGP_WSBEiJ_T0074363.1 MGP_WSBEiJ_G0029485.1 mouse_genomes_project 5 145150280 145506259 + Sdk1 protein_coding retained_intron MGP_WSBEiJ_T0074364.1 MGP_WSBEiJ_G0029485.1 mouse_genomes_project 5 145290127 145895901 + Sdk1 protein_coding retained_intron MGP_WSBEiJ_T0074365.1 MGP_WSBEiJ_G0029485.1 mouse_genomes_project 5 145790975 146163651 + MGP_WSBEiJ_P0074365 Sdk1 protein_coding protein_coding MGP_WSBEiJ_T0008028.1 MGP_WSBEiJ_G0006550.1 mouse_genomes_project 5 71785633 71786533 - AU023070 lincRNA lincRNA MGP_WSBEiJ_T0071349.1 MGP_WSBEiJ_G0028912.1 mouse_genomes_project 5 90872594 90910520 + MGP_WSBEiJ_P0071349 5830473C10Rik protein_coding protein_coding MGP_WSBEiJ_T0071350.1 MGP_WSBEiJ_G0028912.1 mouse_genomes_project 5 90872704 90890061 + MGP_WSBEiJ_P0071350 5830473C10Rik protein_coding protein_coding MGP_WSBEiJ_T0017581.1 MGP_WSBEiJ_G0015030.1 mouse_genomes_project 5 111560315 111567986 - Gm15787 processed_transcript antisense MGP_WSBEiJ_T0017582.1 MGP_WSBEiJ_G0015030.1 mouse_genomes_project 5 111560927 111581747 - Gm15787 processed_transcript processed_transcript MGP_WSBEiJ_T0017583.1 MGP_WSBEiJ_G0015030.1 mouse_genomes_project 5 111567996 111581686 - Gm15787 processed_transcript antisense MGP_WSBEiJ_T0017584.1 MGP_WSBEiJ_G0015030.1 mouse_genomes_project 5 111572882 111581747 - Gm15787 processed_transcript antisense MGP_WSBEiJ_T0017585.1 MGP_WSBEiJ_G0015030.1 mouse_genomes_project 5 111573569 111581709 - Gm15787 processed_transcript antisense MGP_WSBEiJ_T0017586.1 MGP_WSBEiJ_G0015030.1 mouse_genomes_project 5 111573631 111575271 - Gm15787 processed_transcript antisense MGP_WSBEiJ_T0017587.1 MGP_WSBEiJ_G0015030.1 mouse_genomes_project 5 111574972 111581747 - Gm15787 processed_transcript antisense MGP_WSBEiJ_T0017588.1 MGP_WSBEiJ_G0015030.1 mouse_genomes_project 5 111575495 111581683 - Gm15787 processed_transcript antisense MGP_WSBEiJ_T0014558.1 MGP_WSBEiJ_G0012688.1 mouse_genomes_project 5 59572440 59574233 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074640.1 MGP_WSBEiJ_G0029549.1 mouse_genomes_project 5 150505420 150518763 - MGP_WSBEiJ_P0074640 Rnf6 protein_coding protein_coding MGP_WSBEiJ_T0074641.1 MGP_WSBEiJ_G0029549.1 mouse_genomes_project 5 150505424 150518090 - MGP_WSBEiJ_P0074641 Rnf6 protein_coding protein_coding MGP_WSBEiJ_T0074642.1 MGP_WSBEiJ_G0029549.1 mouse_genomes_project 5 150506184 150518165 - MGP_WSBEiJ_P0074642 Rnf6 protein_coding protein_coding MGP_WSBEiJ_T0074643.1 MGP_WSBEiJ_G0029549.1 mouse_genomes_project 5 150507530 150515194 - MGP_WSBEiJ_P0074643 Rnf6 protein_coding protein_coding MGP_WSBEiJ_T0074644.1 MGP_WSBEiJ_G0029549.1 mouse_genomes_project 5 150507903 150518626 - MGP_WSBEiJ_P0074644 Rnf6 protein_coding protein_coding MGP_WSBEiJ_T0074645.1 MGP_WSBEiJ_G0029549.1 mouse_genomes_project 5 150507931 150518124 - MGP_WSBEiJ_P0074645 Rnf6 protein_coding protein_coding MGP_WSBEiJ_T0074646.1 MGP_WSBEiJ_G0029549.1 mouse_genomes_project 5 150508080 150518137 - MGP_WSBEiJ_P0074646 Rnf6 protein_coding protein_coding MGP_WSBEiJ_T0074647.1 MGP_WSBEiJ_G0029549.1 mouse_genomes_project 5 150515283 150518135 - Rnf6 protein_coding processed_transcript MGP_WSBEiJ_T0008216.1 MGP_WSBEiJ_G0006685.1 mouse_genomes_project 5 122562501 122570081 - Gm42654 lincRNA lincRNA MGP_WSBEiJ_T0008217.1 MGP_WSBEiJ_G0006685.1 mouse_genomes_project 5 122562509 122566670 - Gm42654 lincRNA lincRNA MGP_WSBEiJ_T0001849.1 MGP_WSBEiJ_G0001769.1 mouse_genomes_project 5 143980490 143983602 - TEC TEC MGP_WSBEiJ_T0069798.1 MGP_WSBEiJ_G0028627.1 mouse_genomes_project 5 30657207 30725674 - MGP_WSBEiJ_P0069798 Prr14l protein_coding protein_coding MGP_WSBEiJ_T0069799.1 MGP_WSBEiJ_G0028627.1 mouse_genomes_project 5 30662004 30664470 - Prr14l protein_coding retained_intron MGP_WSBEiJ_T0069800.1 MGP_WSBEiJ_G0028627.1 mouse_genomes_project 5 30706586 30725654 - MGP_WSBEiJ_P0069800 Prr14l protein_coding protein_coding MGP_WSBEiJ_T0014599.1 MGP_WSBEiJ_G0012729.1 mouse_genomes_project 5 77568500 77568837 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071018.1 MGP_WSBEiJ_G0028830.1 mouse_genomes_project 5 75725725 75814236 - MGP_WSBEiJ_P0071018 Clock protein_coding protein_coding MGP_WSBEiJ_T0071019.1 MGP_WSBEiJ_G0028830.1 mouse_genomes_project 5 75728030 75813992 - MGP_WSBEiJ_P0071019 Clock protein_coding protein_coding MGP_WSBEiJ_T0071020.1 MGP_WSBEiJ_G0028830.1 mouse_genomes_project 5 75729706 75787410 - MGP_WSBEiJ_P0071020 Clock protein_coding protein_coding MGP_WSBEiJ_T0071021.1 MGP_WSBEiJ_G0028830.1 mouse_genomes_project 5 75745355 75814198 - Clock protein_coding retained_intron MGP_WSBEiJ_T0071022.1 MGP_WSBEiJ_G0028830.1 mouse_genomes_project 5 75764378 75814216 - Clock protein_coding processed_transcript MGP_WSBEiJ_T0071023.1 MGP_WSBEiJ_G0028830.1 mouse_genomes_project 5 75785351 75814216 - Clock protein_coding retained_intron MGP_WSBEiJ_T0001733.1 MGP_WSBEiJ_G0001655.1 mouse_genomes_project 5 116858290 116859605 + TEC TEC MGP_WSBEiJ_T0004817.1 MGP_WSBEiJ_G0004138.1 mouse_genomes_project 5 154891640 154907702 - Gm42556 antisense antisense MGP_WSBEiJ_T0001490.1 MGP_WSBEiJ_G0001415.1 mouse_genomes_project 5 42154649 42155196 + TEC TEC MGP_WSBEiJ_T0001421.1 MGP_WSBEiJ_G0001349.1 mouse_genomes_project 5 11705982 11710542 + TEC TEC MGP_WSBEiJ_T0069121.1 MGP_WSBEiJ_G0028509.1 mouse_genomes_project 5 19034717 19077049 - MGP_WSBEiJ_P0069121 Napepld protein_coding protein_coding MGP_WSBEiJ_T0069122.1 MGP_WSBEiJ_G0028509.1 mouse_genomes_project 5 19034719 19077051 - MGP_WSBEiJ_P0069122 Napepld protein_coding protein_coding MGP_WSBEiJ_T0070586.1 MGP_WSBEiJ_G0028758.1 mouse_genomes_project 5 64028148 64104891 + MGP_WSBEiJ_P0070586 Fam114a1 protein_coding protein_coding MGP_WSBEiJ_T0070587.1 MGP_WSBEiJ_G0028758.1 mouse_genomes_project 5 64031297 64066295 + MGP_WSBEiJ_P0070587 Fam114a1 protein_coding protein_coding MGP_WSBEiJ_T0014734.1 MGP_WSBEiJ_G0012864.1 mouse_genomes_project 5 144301547 144302021 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001728.1 MGP_WSBEiJ_G0001650.1 mouse_genomes_project 5 115550171 115553390 + TEC TEC MGP_WSBEiJ_T0004655.1 MGP_WSBEiJ_G0004027.1 mouse_genomes_project 5 96994281 96995637 - Gm33050 antisense antisense MGP_WSBEiJ_T0069123.1 MGP_WSBEiJ_G0028510.1 mouse_genomes_project 5 19117805 19139808 + Pmpcb protein_coding retained_intron MGP_WSBEiJ_T0069124.1 MGP_WSBEiJ_G0028510.1 mouse_genomes_project 5 19117842 19139813 + MGP_WSBEiJ_P0069124 Pmpcb protein_coding protein_coding MGP_WSBEiJ_T0069125.1 MGP_WSBEiJ_G0028510.1 mouse_genomes_project 5 19119547 19121379 + Pmpcb protein_coding retained_intron MGP_WSBEiJ_T0069126.1 MGP_WSBEiJ_G0028510.1 mouse_genomes_project 5 19124388 19125188 + Pmpcb protein_coding retained_intron MGP_WSBEiJ_T0069127.1 MGP_WSBEiJ_G0028510.1 mouse_genomes_project 5 19139174 19139802 + Pmpcb protein_coding retained_intron MGP_WSBEiJ_T0069128.1 MGP_WSBEiJ_G0028510.1 mouse_genomes_project 5 19139300 19139808 + MGP_WSBEiJ_P0069128 Pmpcb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069129.1 MGP_WSBEiJ_G0028510.1 mouse_genomes_project 5 19139436 19139802 + Pmpcb protein_coding retained_intron MGP_WSBEiJ_T0001699.1 MGP_WSBEiJ_G0001621.1 mouse_genomes_project 5 104954951 104957213 - TEC TEC MGP_WSBEiJ_T0001773.1 MGP_WSBEiJ_G0001695.1 mouse_genomes_project 5 125642128 125645018 + TEC TEC MGP_WSBEiJ_T0001504.1 MGP_WSBEiJ_G0001429.1 mouse_genomes_project 5 42987931 42990524 - TEC TEC MGP_WSBEiJ_T0069870.1 MGP_WSBEiJ_G0028640.1 mouse_genomes_project 5 31574874 31617350 + MGP_WSBEiJ_P0069870 protein_coding protein_coding MGP_WSBEiJ_T0069871.1 MGP_WSBEiJ_G0028640.1 mouse_genomes_project 5 31574874 31597755 + MGP_WSBEiJ_P0069871 protein_coding protein_coding MGP_WSBEiJ_T0069872.1 MGP_WSBEiJ_G0028640.1 mouse_genomes_project 5 31574893 31588919 + MGP_WSBEiJ_P0069872 protein_coding protein_coding MGP_WSBEiJ_T0069873.1 MGP_WSBEiJ_G0028640.1 mouse_genomes_project 5 31575300 31587239 + MGP_WSBEiJ_P0069873 protein_coding protein_coding MGP_WSBEiJ_T0069874.1 MGP_WSBEiJ_G0028640.1 mouse_genomes_project 5 31575332 31597752 + MGP_WSBEiJ_P0069874 protein_coding protein_coding MGP_WSBEiJ_T0069875.1 MGP_WSBEiJ_G0028640.1 mouse_genomes_project 5 31575380 31580346 + protein_coding retained_intron MGP_WSBEiJ_T0069876.1 MGP_WSBEiJ_G0028640.1 mouse_genomes_project 5 31592737 31597755 + MGP_WSBEiJ_P0069876 protein_coding protein_coding MGP_WSBEiJ_T0069877.1 MGP_WSBEiJ_G0028640.1 mouse_genomes_project 5 31592800 31617340 + MGP_WSBEiJ_P0069877 protein_coding protein_coding MGP_WSBEiJ_T0001619.1 MGP_WSBEiJ_G0001542.1 mouse_genomes_project 5 66191239 66193388 + TEC TEC MGP_WSBEiJ_T0004695.1 MGP_WSBEiJ_G0004052.1 mouse_genomes_project 5 112234693 112242919 + Gm15559 antisense antisense MGP_WSBEiJ_T0014610.1 MGP_WSBEiJ_G0012740.1 mouse_genomes_project 5 87029599 87030659 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069103.1 MGP_WSBEiJ_G0028503.1 mouse_genomes_project 5 18637636 18780645 - MGP_WSBEiJ_P0069103 Ccdc146 protein_coding protein_coding MGP_WSBEiJ_T0069104.1 MGP_WSBEiJ_G0028503.1 mouse_genomes_project 5 18666204 18780645 - MGP_WSBEiJ_P0069104 Ccdc146 protein_coding protein_coding MGP_WSBEiJ_T0069105.1 MGP_WSBEiJ_G0028503.1 mouse_genomes_project 5 18666487 18684115 - Ccdc146 protein_coding retained_intron MGP_WSBEiJ_T0069106.1 MGP_WSBEiJ_G0028503.1 mouse_genomes_project 5 18670101 18675212 - Ccdc146 protein_coding retained_intron MGP_WSBEiJ_T0069107.1 MGP_WSBEiJ_G0028503.1 mouse_genomes_project 5 18675265 18684329 - Ccdc146 protein_coding processed_transcript MGP_WSBEiJ_T0072287.1 MGP_WSBEiJ_G0029110.1 mouse_genomes_project 5 115780191 115805448 + Usp30 protein_coding processed_transcript MGP_WSBEiJ_T0072288.1 MGP_WSBEiJ_G0029110.1 mouse_genomes_project 5 115780244 115822672 + MGP_WSBEiJ_P0072288 Usp30 protein_coding protein_coding MGP_WSBEiJ_T0072289.1 MGP_WSBEiJ_G0029110.1 mouse_genomes_project 5 115780480 115801838 + Usp30 protein_coding processed_transcript MGP_WSBEiJ_T0072290.1 MGP_WSBEiJ_G0029110.1 mouse_genomes_project 5 115817135 115841678 + MGP_WSBEiJ_P0072290 Usp30 protein_coding protein_coding MGP_WSBEiJ_T0072291.1 MGP_WSBEiJ_G0029110.1 mouse_genomes_project 5 115817180 115838055 + MGP_WSBEiJ_P0072291 Usp30 protein_coding protein_coding MGP_WSBEiJ_T0072292.1 MGP_WSBEiJ_G0029110.1 mouse_genomes_project 5 115820532 115829141 + Usp30 protein_coding retained_intron MGP_WSBEiJ_T0072293.1 MGP_WSBEiJ_G0029110.1 mouse_genomes_project 5 115827950 115828470 + Usp30 protein_coding retained_intron MGP_WSBEiJ_T0010556.1 MGP_WSBEiJ_G0008713.1 mouse_genomes_project 5 140836780 140836845 - Mir7036 miRNA miRNA MGP_WSBEiJ_T0001694.1 MGP_WSBEiJ_G0001616.1 mouse_genomes_project 5 102889013 102890102 - TEC TEC MGP_WSBEiJ_T0001641.1 MGP_WSBEiJ_G0001564.1 mouse_genomes_project 5 72263148 72265503 - TEC TEC MGP_WSBEiJ_T0001642.1 MGP_WSBEiJ_G0001564.1 mouse_genomes_project 5 72264856 72265503 - TEC pseudogene MGP_WSBEiJ_T0008119.1 MGP_WSBEiJ_G0006620.1 mouse_genomes_project 5 107128913 107137315 + Gm32736 lincRNA lincRNA MGP_WSBEiJ_T0073745.1 MGP_WSBEiJ_G0029366.1 mouse_genomes_project 5 139160476 139195760 - MGP_WSBEiJ_P0073745 Styxl1 protein_coding protein_coding MGP_WSBEiJ_T0073746.1 MGP_WSBEiJ_G0029366.1 mouse_genomes_project 5 139160477 139195907 - MGP_WSBEiJ_P0073746 Styxl1 protein_coding protein_coding MGP_WSBEiJ_T0073747.1 MGP_WSBEiJ_G0029366.1 mouse_genomes_project 5 139160777 139195772 - MGP_WSBEiJ_P0073747 Styxl1 protein_coding protein_coding MGP_WSBEiJ_T0073748.1 MGP_WSBEiJ_G0029366.1 mouse_genomes_project 5 139160842 139195823 - MGP_WSBEiJ_P0073748 Styxl1 protein_coding protein_coding MGP_WSBEiJ_T0073749.1 MGP_WSBEiJ_G0029366.1 mouse_genomes_project 5 139160885 139195907 - MGP_WSBEiJ_P0073749 Styxl1 protein_coding protein_coding MGP_WSBEiJ_T0073750.1 MGP_WSBEiJ_G0029366.1 mouse_genomes_project 5 139160905 139195813 - MGP_WSBEiJ_P0073750 Styxl1 protein_coding protein_coding MGP_WSBEiJ_T0073751.1 MGP_WSBEiJ_G0029366.1 mouse_genomes_project 5 139160993 139195813 - MGP_WSBEiJ_P0073751 Styxl1 protein_coding protein_coding MGP_WSBEiJ_T0073752.1 MGP_WSBEiJ_G0029366.1 mouse_genomes_project 5 139171841 139195891 - MGP_WSBEiJ_P0073752 Styxl1 protein_coding protein_coding MGP_WSBEiJ_T0069294.1 MGP_WSBEiJ_G0028539.1 mouse_genomes_project 5 22126297 22140071 - MGP_WSBEiJ_P0069294 Abcf2 protein_coding protein_coding MGP_WSBEiJ_T0008289.1 MGP_WSBEiJ_G0006729.1 mouse_genomes_project 5 141804605 141805070 + Gm43645 lincRNA lincRNA MGP_WSBEiJ_T0010494.1 MGP_WSBEiJ_G0008651.1 mouse_genomes_project 5 10949833 10949938 - Gm24054 miRNA miRNA MGP_WSBEiJ_T0071097.1 MGP_WSBEiJ_G0028843.1 mouse_genomes_project 5 76787893 76795439 - MGP_WSBEiJ_P0071097 Spink2 protein_coding protein_coding MGP_WSBEiJ_T0071098.1 MGP_WSBEiJ_G0028843.1 mouse_genomes_project 5 76787893 76795406 - MGP_WSBEiJ_P0071098 Spink2 protein_coding protein_coding MGP_WSBEiJ_T0071099.1 MGP_WSBEiJ_G0028843.1 mouse_genomes_project 5 76787898 76795178 - MGP_WSBEiJ_P0071099 Spink2 protein_coding protein_coding MGP_WSBEiJ_T0070631.1 MGP_WSBEiJ_G0028766.1 mouse_genomes_project 5 64498702 64521184 - MGP_WSBEiJ_P0070631 Ugdh protein_coding protein_coding MGP_WSBEiJ_T0070632.1 MGP_WSBEiJ_G0028766.1 mouse_genomes_project 5 64498705 64510938 - Ugdh protein_coding retained_intron MGP_WSBEiJ_T0070633.1 MGP_WSBEiJ_G0028766.1 mouse_genomes_project 5 64503026 64508282 - Ugdh protein_coding retained_intron MGP_WSBEiJ_T0070634.1 MGP_WSBEiJ_G0028766.1 mouse_genomes_project 5 64508811 64513766 - MGP_WSBEiJ_P0070634 Ugdh protein_coding protein_coding MGP_WSBEiJ_T0071219.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87768108 87776783 + Csn1s1 protein_coding retained_intron MGP_WSBEiJ_T0071220.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87768108 87769378 + Csn1s1 protein_coding retained_intron MGP_WSBEiJ_T0071221.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87768108 87769436 + Csn1s1 protein_coding retained_intron MGP_WSBEiJ_T0071222.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87768127 87776392 + MGP_WSBEiJ_P0071222 Csn1s1 protein_coding protein_coding MGP_WSBEiJ_T0071223.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87768128 87785790 + MGP_WSBEiJ_P0071223 Csn1s1 protein_coding protein_coding MGP_WSBEiJ_T0071224.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87768133 87785790 + MGP_WSBEiJ_P0071224 Csn1s1 protein_coding protein_coding MGP_WSBEiJ_T0071225.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87768747 87777248 + Csn1s1 protein_coding processed_transcript MGP_WSBEiJ_T0071226.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87769133 87771669 + Csn1s1 protein_coding retained_intron MGP_WSBEiJ_T0071227.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87773681 87774607 + Csn1s1 protein_coding retained_intron MGP_WSBEiJ_T0071228.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87779038 87781622 + Csn1s1 protein_coding retained_intron MGP_WSBEiJ_T0071229.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87781300 87785736 + Csn1s1 protein_coding retained_intron MGP_WSBEiJ_T0071230.1 MGP_WSBEiJ_G0028877.1 mouse_genomes_project 5 87783740 87785270 + Csn1s1 protein_coding retained_intron MGP_WSBEiJ_T0071830.1 MGP_WSBEiJ_G0029020.1 mouse_genomes_project 5 108420296 108479976 + MGP_WSBEiJ_P0071830 protein_coding protein_coding MGP_WSBEiJ_T0071831.1 MGP_WSBEiJ_G0029020.1 mouse_genomes_project 5 108420312 108439888 + MGP_WSBEiJ_P0071831 protein_coding protein_coding MGP_WSBEiJ_T0071832.1 MGP_WSBEiJ_G0029020.1 mouse_genomes_project 5 108420329 108431216 + protein_coding processed_transcript MGP_WSBEiJ_T0071833.1 MGP_WSBEiJ_G0029020.1 mouse_genomes_project 5 108460408 108479414 + protein_coding processed_transcript MGP_WSBEiJ_T0099610.1 MGP_WSBEiJ_G0038273.1 mouse_genomes_project 5 99168207 99168338 + Gm24279 snoRNA snoRNA MGP_WSBEiJ_T0014520.1 MGP_WSBEiJ_G0012650.1 mouse_genomes_project 5 40120471 40121735 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004592.1 MGP_WSBEiJ_G0003977.1 mouse_genomes_project 5 34915127 34918412 - Ppp2r2cos antisense antisense MGP_WSBEiJ_T0073260.1 MGP_WSBEiJ_G0029280.1 mouse_genomes_project 5 127421863 127544333 + MGP_WSBEiJ_P0073260 Dnah10 protein_coding protein_coding MGP_WSBEiJ_T0073261.1 MGP_WSBEiJ_G0029280.1 mouse_genomes_project 5 127421863 127544338 + MGP_WSBEiJ_P0073261 Dnah10 protein_coding protein_coding MGP_WSBEiJ_T0073262.1 MGP_WSBEiJ_G0029280.1 mouse_genomes_project 5 127494054 127494635 + Dnah10 protein_coding processed_transcript MGP_WSBEiJ_T0073263.1 MGP_WSBEiJ_G0029280.1 mouse_genomes_project 5 127498979 127505077 + Dnah10 protein_coding processed_transcript MGP_WSBEiJ_T0073264.1 MGP_WSBEiJ_G0029280.1 mouse_genomes_project 5 127510208 127513419 + Dnah10 protein_coding retained_intron MGP_WSBEiJ_T0073265.1 MGP_WSBEiJ_G0029280.1 mouse_genomes_project 5 127514069 127544155 + Dnah10 protein_coding retained_intron MGP_WSBEiJ_T0073687.1 MGP_WSBEiJ_G0029353.1 mouse_genomes_project 5 138539185 138552818 + MGP_WSBEiJ_P0073687 Bcl7b protein_coding protein_coding MGP_WSBEiJ_T0073688.1 MGP_WSBEiJ_G0029353.1 mouse_genomes_project 5 138539291 138544351 + MGP_WSBEiJ_P0073688 Bcl7b protein_coding protein_coding MGP_WSBEiJ_T0073689.1 MGP_WSBEiJ_G0029353.1 mouse_genomes_project 5 138539314 138552794 + MGP_WSBEiJ_P0073689 Bcl7b protein_coding protein_coding MGP_WSBEiJ_T0073690.1 MGP_WSBEiJ_G0029353.1 mouse_genomes_project 5 138539347 138551558 + MGP_WSBEiJ_P0073690 Bcl7b protein_coding protein_coding MGP_WSBEiJ_T0073691.1 MGP_WSBEiJ_G0029353.1 mouse_genomes_project 5 138550544 138552088 + Bcl7b protein_coding retained_intron MGP_WSBEiJ_T0074286.1 MGP_WSBEiJ_G0029466.1 mouse_genomes_project 5 143580166 143591305 + MGP_WSBEiJ_P0074286 Mafk protein_coding protein_coding MGP_WSBEiJ_T0074287.1 MGP_WSBEiJ_G0029466.1 mouse_genomes_project 5 143580187 143588152 + Mafk protein_coding processed_transcript MGP_WSBEiJ_T0074288.1 MGP_WSBEiJ_G0029466.1 mouse_genomes_project 5 143586159 143590983 + MGP_WSBEiJ_P0074288 Mafk protein_coding protein_coding MGP_WSBEiJ_T0001476.1 MGP_WSBEiJ_G0001401.1 mouse_genomes_project 5 35220092 35222969 + TEC TEC MGP_WSBEiJ_T0070645.1 MGP_WSBEiJ_G0028769.1 mouse_genomes_project 5 64625458 64699316 + MGP_WSBEiJ_P0070645 Ube2k protein_coding protein_coding MGP_WSBEiJ_T0070646.1 MGP_WSBEiJ_G0028769.1 mouse_genomes_project 5 64625474 64698509 + MGP_WSBEiJ_P0070646 Ube2k protein_coding protein_coding MGP_WSBEiJ_T0070647.1 MGP_WSBEiJ_G0028769.1 mouse_genomes_project 5 64625488 64699316 + MGP_WSBEiJ_P0070647 Ube2k protein_coding protein_coding MGP_WSBEiJ_T0070648.1 MGP_WSBEiJ_G0028769.1 mouse_genomes_project 5 64625531 64698706 + MGP_WSBEiJ_P0070648 Ube2k protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070649.1 MGP_WSBEiJ_G0028769.1 mouse_genomes_project 5 64625681 64699589 + MGP_WSBEiJ_P0070649 Ube2k protein_coding protein_coding MGP_WSBEiJ_T0070650.1 MGP_WSBEiJ_G0028769.1 mouse_genomes_project 5 64660068 64662853 + Ube2k protein_coding retained_intron MGP_WSBEiJ_T0070651.1 MGP_WSBEiJ_G0028769.1 mouse_genomes_project 5 64695155 64698706 + Ube2k protein_coding retained_intron MGP_WSBEiJ_T0098380.1 MGP_WSBEiJ_G0037043.1 mouse_genomes_project 5 117383097 117383238 + Gm24407 snRNA snRNA MGP_WSBEiJ_T0074618.1 MGP_WSBEiJ_G0029540.1 mouse_genomes_project 5 149355352 149373934 + MGP_WSBEiJ_P0074618 Zkscan5 protein_coding protein_coding MGP_WSBEiJ_T0074619.1 MGP_WSBEiJ_G0029540.1 mouse_genomes_project 5 149355458 149373934 + MGP_WSBEiJ_P0074619 Zkscan5 protein_coding protein_coding MGP_WSBEiJ_T0074620.1 MGP_WSBEiJ_G0029540.1 mouse_genomes_project 5 149355911 149370785 + MGP_WSBEiJ_P0074620 Zkscan5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074621.1 MGP_WSBEiJ_G0029540.1 mouse_genomes_project 5 149358395 149370649 + MGP_WSBEiJ_P0074621 Zkscan5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074622.1 MGP_WSBEiJ_G0029540.1 mouse_genomes_project 5 149358425 149370703 + MGP_WSBEiJ_P0074622 Zkscan5 protein_coding protein_coding MGP_WSBEiJ_T0074623.1 MGP_WSBEiJ_G0029540.1 mouse_genomes_project 5 149359994 149370519 + Zkscan5 protein_coding processed_transcript MGP_WSBEiJ_T0070096.1 MGP_WSBEiJ_G0028672.1 mouse_genomes_project 5 33703039 33735635 - MGP_WSBEiJ_P0070096 Sh3tc1 protein_coding protein_coding MGP_WSBEiJ_T0070097.1 MGP_WSBEiJ_G0028672.1 mouse_genomes_project 5 33703047 33735838 - MGP_WSBEiJ_P0070097 Sh3tc1 protein_coding protein_coding MGP_WSBEiJ_T0070098.1 MGP_WSBEiJ_G0028672.1 mouse_genomes_project 5 33703048 33730508 - MGP_WSBEiJ_P0070098 Sh3tc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070099.1 MGP_WSBEiJ_G0028672.1 mouse_genomes_project 5 33703050 33722813 - MGP_WSBEiJ_P0070099 Sh3tc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070100.1 MGP_WSBEiJ_G0028672.1 mouse_genomes_project 5 33703050 33746559 - MGP_WSBEiJ_P0070100 Sh3tc1 protein_coding protein_coding MGP_WSBEiJ_T0070101.1 MGP_WSBEiJ_G0028672.1 mouse_genomes_project 5 33703052 33725800 - Sh3tc1 protein_coding retained_intron MGP_WSBEiJ_T0070102.1 MGP_WSBEiJ_G0028672.1 mouse_genomes_project 5 33729629 33735574 - Sh3tc1 protein_coding processed_transcript MGP_WSBEiJ_T0001816.1 MGP_WSBEiJ_G0001737.1 mouse_genomes_project 5 135079804 135082043 - TEC TEC MGP_WSBEiJ_T0069950.1 MGP_WSBEiJ_G0028651.1 mouse_genomes_project 5 32238120 32280379 + MGP_WSBEiJ_P0069950 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0001750.1 MGP_WSBEiJ_G0001672.1 mouse_genomes_project 5 120801415 120803034 + TEC TEC MGP_WSBEiJ_T0004615.1 MGP_WSBEiJ_G0003992.1 mouse_genomes_project 5 50942948 50944197 + Gm43685 antisense antisense MGP_WSBEiJ_T0001676.1 MGP_WSBEiJ_G0001598.1 mouse_genomes_project 5 93612082 93614172 + TEC TEC MGP_WSBEiJ_T0001720.1 MGP_WSBEiJ_G0001642.1 mouse_genomes_project 5 113937787 113938154 - TEC TEC MGP_WSBEiJ_T0014543.1 MGP_WSBEiJ_G0012673.1 mouse_genomes_project 5 54326364 54327169 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069460.1 MGP_WSBEiJ_G0028576.1 mouse_genomes_project 5 28004980 28045023 + MGP_WSBEiJ_P0069460 protein_coding protein_coding MGP_WSBEiJ_T0069461.1 MGP_WSBEiJ_G0028576.1 mouse_genomes_project 5 28005034 28007073 + protein_coding retained_intron MGP_WSBEiJ_T0069462.1 MGP_WSBEiJ_G0028576.1 mouse_genomes_project 5 28005039 28023677 + protein_coding retained_intron MGP_WSBEiJ_T0069463.1 MGP_WSBEiJ_G0028576.1 mouse_genomes_project 5 28005046 28031133 + protein_coding retained_intron MGP_WSBEiJ_T0069464.1 MGP_WSBEiJ_G0028576.1 mouse_genomes_project 5 28005049 28030372 + MGP_WSBEiJ_P0069464 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069465.1 MGP_WSBEiJ_G0028576.1 mouse_genomes_project 5 28005073 28041569 + MGP_WSBEiJ_P0069465 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069466.1 MGP_WSBEiJ_G0028576.1 mouse_genomes_project 5 28035658 28039589 + protein_coding retained_intron MGP_WSBEiJ_T0069467.1 MGP_WSBEiJ_G0028576.1 mouse_genomes_project 5 28036138 28039843 + protein_coding processed_transcript MGP_WSBEiJ_T0069408.1 MGP_WSBEiJ_G0028564.1 mouse_genomes_project 5 27134995 27161948 + MGP_WSBEiJ_P0069408 Nom1 protein_coding protein_coding MGP_WSBEiJ_T0069409.1 MGP_WSBEiJ_G0028564.1 mouse_genomes_project 5 27142526 27147551 + Nom1 protein_coding retained_intron MGP_WSBEiJ_T0001848.1 MGP_WSBEiJ_G0001768.1 mouse_genomes_project 5 143857088 143859634 - TEC TEC MGP_WSBEiJ_T0004706.1 MGP_WSBEiJ_G0004060.1 mouse_genomes_project 5 116728273 116734229 - Gm13822 antisense antisense MGP_WSBEiJ_T0071500.1 MGP_WSBEiJ_G0028947.1 mouse_genomes_project 5 93618740 93642561 - MGP_WSBEiJ_P0071500 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071501.1 MGP_WSBEiJ_G0028947.1 mouse_genomes_project 5 93623198 93623967 - protein_coding retained_intron MGP_WSBEiJ_T0071502.1 MGP_WSBEiJ_G0028947.1 mouse_genomes_project 5 93623507 93638847 - MGP_WSBEiJ_P0071502 protein_coding protein_coding MGP_WSBEiJ_T0071503.1 MGP_WSBEiJ_G0028947.1 mouse_genomes_project 5 93625310 93642531 - MGP_WSBEiJ_P0071503 protein_coding protein_coding MGP_WSBEiJ_T0070626.1 MGP_WSBEiJ_G0028765.1 mouse_genomes_project 5 64476267 64481662 + Lias protein_coding retained_intron MGP_WSBEiJ_T0070627.1 MGP_WSBEiJ_G0028765.1 mouse_genomes_project 5 64476287 64481091 + Lias protein_coding retained_intron MGP_WSBEiJ_T0070628.1 MGP_WSBEiJ_G0028765.1 mouse_genomes_project 5 64476288 64483165 + MGP_WSBEiJ_P0070628 Lias protein_coding protein_coding MGP_WSBEiJ_T0070629.1 MGP_WSBEiJ_G0028765.1 mouse_genomes_project 5 64476352 64494275 + MGP_WSBEiJ_P0070629 Lias protein_coding protein_coding MGP_WSBEiJ_T0070630.1 MGP_WSBEiJ_G0028765.1 mouse_genomes_project 5 64483020 64485397 + Lias protein_coding retained_intron MGP_WSBEiJ_T0011392.1 MGP_WSBEiJ_G0009549.1 mouse_genomes_project 5 27429891 27430220 + Gm26346 misc_RNA misc_RNA MGP_WSBEiJ_T0014647.1 MGP_WSBEiJ_G0012777.1 mouse_genomes_project 5 104109296 104109884 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097420.1 MGP_WSBEiJ_G0036094.1 mouse_genomes_project 5 117410532 117411233 + Gm13840 sense_intronic sense_intronic MGP_WSBEiJ_T0073235.1 MGP_WSBEiJ_G0029276.1 mouse_genomes_project 5 127303685 127319004 + MGP_WSBEiJ_P0073235 Ddx55 protein_coding protein_coding MGP_WSBEiJ_T0073236.1 MGP_WSBEiJ_G0029276.1 mouse_genomes_project 5 127303703 127318226 + MGP_WSBEiJ_P0073236 Ddx55 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073237.1 MGP_WSBEiJ_G0029276.1 mouse_genomes_project 5 127303730 127312346 + Ddx55 protein_coding processed_transcript MGP_WSBEiJ_T0073238.1 MGP_WSBEiJ_G0029276.1 mouse_genomes_project 5 127303792 127312402 + Ddx55 protein_coding processed_transcript MGP_WSBEiJ_T0073239.1 MGP_WSBEiJ_G0029276.1 mouse_genomes_project 5 127306495 127307925 + Ddx55 protein_coding retained_intron MGP_WSBEiJ_T0073240.1 MGP_WSBEiJ_G0029276.1 mouse_genomes_project 5 127313516 127318146 + Ddx55 protein_coding processed_transcript MGP_WSBEiJ_T0004803.1 MGP_WSBEiJ_G0004127.1 mouse_genomes_project 5 147437639 147452588 - Gm20635 antisense antisense MGP_WSBEiJ_T0069472.1 MGP_WSBEiJ_G0028578.1 mouse_genomes_project 5 28094016 28194781 - MGP_WSBEiJ_P0069472 Otof protein_coding protein_coding MGP_WSBEiJ_T0069473.1 MGP_WSBEiJ_G0028578.1 mouse_genomes_project 5 28094016 28194751 - MGP_WSBEiJ_P0069473 Otof protein_coding protein_coding MGP_WSBEiJ_T0069474.1 MGP_WSBEiJ_G0028578.1 mouse_genomes_project 5 28094022 28194781 - Otof protein_coding retained_intron MGP_WSBEiJ_T0069475.1 MGP_WSBEiJ_G0028578.1 mouse_genomes_project 5 28094249 28194708 - Otof protein_coding retained_intron MGP_WSBEiJ_T0069476.1 MGP_WSBEiJ_G0028578.1 mouse_genomes_project 5 28136069 28139222 - Otof protein_coding retained_intron MGP_WSBEiJ_T0001826.1 MGP_WSBEiJ_G0001747.1 mouse_genomes_project 5 135591106 135592381 - TEC TEC MGP_WSBEiJ_T0072653.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122323274 122408337 + MGP_WSBEiJ_P0072653 Rbm19 protein_coding protein_coding MGP_WSBEiJ_T0072654.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122323326 122325791 + Rbm19 protein_coding retained_intron MGP_WSBEiJ_T0072655.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122323329 122408335 + MGP_WSBEiJ_P0072655 Rbm19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072656.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122325405 122327103 + Rbm19 protein_coding retained_intron MGP_WSBEiJ_T0072657.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122364611 122408327 + Rbm19 protein_coding processed_transcript MGP_WSBEiJ_T0072658.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122370495 122407549 + Rbm19 protein_coding processed_transcript MGP_WSBEiJ_T0072659.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122376136 122395590 + Rbm19 protein_coding processed_transcript MGP_WSBEiJ_T0072660.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122377730 122408333 + Rbm19 protein_coding processed_transcript MGP_WSBEiJ_T0072661.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122380923 122407346 + Rbm19 protein_coding processed_transcript MGP_WSBEiJ_T0072662.1 MGP_WSBEiJ_G0029179.1 mouse_genomes_project 5 122383548 122407325 + Rbm19 protein_coding processed_transcript MGP_WSBEiJ_T0099580.1 MGP_WSBEiJ_G0038243.1 mouse_genomes_project 5 5183199 5183342 + Gm23993 snoRNA snoRNA MGP_WSBEiJ_T0001516.1 MGP_WSBEiJ_G0001441.1 mouse_genomes_project 5 46606697 46608455 + TEC TEC MGP_WSBEiJ_T0014571.1 MGP_WSBEiJ_G0012701.1 mouse_genomes_project 5 63215212 63216039 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014482.1 MGP_WSBEiJ_G0012612.1 mouse_genomes_project 5 25494992 25495473 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071171.1 MGP_WSBEiJ_G0028855.1 mouse_genomes_project 5 86152711 86174922 - MGP_WSBEiJ_P0071171 Gnrhr protein_coding protein_coding MGP_WSBEiJ_T0071172.1 MGP_WSBEiJ_G0028855.1 mouse_genomes_project 5 86153951 86174891 - MGP_WSBEiJ_P0071172 Gnrhr protein_coding protein_coding MGP_WSBEiJ_T0071173.1 MGP_WSBEiJ_G0028855.1 mouse_genomes_project 5 86156513 86174867 - MGP_WSBEiJ_P0071173 Gnrhr protein_coding protein_coding MGP_WSBEiJ_T0069561.1 MGP_WSBEiJ_G0028594.1 mouse_genomes_project 5 28784730 28797036 - MGP_WSBEiJ_P0069561 Slc5a6 protein_coding protein_coding MGP_WSBEiJ_T0069562.1 MGP_WSBEiJ_G0028594.1 mouse_genomes_project 5 28784730 28797958 - MGP_WSBEiJ_P0069562 Slc5a6 protein_coding protein_coding MGP_WSBEiJ_T0069563.1 MGP_WSBEiJ_G0028594.1 mouse_genomes_project 5 28784730 28797596 - MGP_WSBEiJ_P0069563 Slc5a6 protein_coding protein_coding MGP_WSBEiJ_T0069564.1 MGP_WSBEiJ_G0028594.1 mouse_genomes_project 5 28784731 28797043 - MGP_WSBEiJ_P0069564 Slc5a6 protein_coding protein_coding MGP_WSBEiJ_T0069565.1 MGP_WSBEiJ_G0028594.1 mouse_genomes_project 5 28785581 28786689 - Slc5a6 protein_coding retained_intron MGP_WSBEiJ_T0069566.1 MGP_WSBEiJ_G0028594.1 mouse_genomes_project 5 28788046 28791630 - MGP_WSBEiJ_P0069566 Slc5a6 protein_coding protein_coding MGP_WSBEiJ_T0069567.1 MGP_WSBEiJ_G0028594.1 mouse_genomes_project 5 28792119 28797113 - MGP_WSBEiJ_P0069567 Slc5a6 protein_coding protein_coding MGP_WSBEiJ_T0008193.1 MGP_WSBEiJ_G0006666.1 mouse_genomes_project 5 118350232 118352353 - 4930562A09Rik lincRNA lincRNA MGP_WSBEiJ_T0008147.1 MGP_WSBEiJ_G0006639.1 mouse_genomes_project 5 112243540 112244794 + Gm26515 lincRNA lincRNA MGP_WSBEiJ_T0004564.1 MGP_WSBEiJ_G0003952.1 mouse_genomes_project 5 19722114 19723826 + Gm16110 antisense antisense MGP_WSBEiJ_T0069355.1 MGP_WSBEiJ_G0028553.1 mouse_genomes_project 5 23385705 23481587 + MGP_WSBEiJ_P0069355 Actr3b protein_coding protein_coding MGP_WSBEiJ_T0069356.1 MGP_WSBEiJ_G0028553.1 mouse_genomes_project 5 23385789 23406767 + Actr3b protein_coding processed_transcript MGP_WSBEiJ_T0010516.1 MGP_WSBEiJ_G0008673.1 mouse_genomes_project 5 66275690 66275804 - Gm23841 miRNA miRNA MGP_WSBEiJ_T0072698.1 MGP_WSBEiJ_G0029189.1 mouse_genomes_project 5 122882992 122888930 - MGP_WSBEiJ_P0072698 Cfap73 protein_coding protein_coding MGP_WSBEiJ_T0070544.1 MGP_WSBEiJ_G0028749.1 mouse_genomes_project 5 61554990 61564970 - Arap2 protein_coding retained_intron MGP_WSBEiJ_T0070545.1 MGP_WSBEiJ_G0028749.1 mouse_genomes_project 5 61554990 61729069 - MGP_WSBEiJ_P0070545 Arap2 protein_coding protein_coding MGP_WSBEiJ_T0070546.1 MGP_WSBEiJ_G0028749.1 mouse_genomes_project 5 61589655 61594676 - Arap2 protein_coding retained_intron MGP_WSBEiJ_T0070547.1 MGP_WSBEiJ_G0028749.1 mouse_genomes_project 5 61597971 61602014 - Arap2 protein_coding retained_intron MGP_WSBEiJ_T0070548.1 MGP_WSBEiJ_G0028749.1 mouse_genomes_project 5 61634102 61640743 - Arap2 protein_coding retained_intron MGP_WSBEiJ_T0070549.1 MGP_WSBEiJ_G0028749.1 mouse_genomes_project 5 61666169 61692217 - Arap2 protein_coding processed_transcript MGP_WSBEiJ_T0014585.1 MGP_WSBEiJ_G0012715.1 mouse_genomes_project 5 71876550 71876809 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069878.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666098 31674256 + MGP_WSBEiJ_P0069878 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069879.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666148 31681487 + MGP_WSBEiJ_P0069879 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069880.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666148 31681487 + MGP_WSBEiJ_P0069880 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069881.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666148 31681486 + MGP_WSBEiJ_P0069881 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069882.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666215 31681482 + MGP_WSBEiJ_P0069882 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069883.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666222 31680026 + MGP_WSBEiJ_P0069883 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069884.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666730 31681487 + MGP_WSBEiJ_P0069884 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069885.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666730 31681487 + MGP_WSBEiJ_P0069885 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069886.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31666868 31674425 + MGP_WSBEiJ_P0069886 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069887.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31667244 31677209 + Fgfr3 protein_coding retained_intron MGP_WSBEiJ_T0069888.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31668192 31674269 + MGP_WSBEiJ_P0069888 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069889.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31674156 31677162 + MGP_WSBEiJ_P0069889 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069890.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31674382 31677702 + Fgfr3 protein_coding retained_intron MGP_WSBEiJ_T0069891.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31674639 31678180 + MGP_WSBEiJ_P0069891 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069892.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31677670 31679271 + MGP_WSBEiJ_P0069892 Fgfr3 protein_coding protein_coding MGP_WSBEiJ_T0069893.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31678110 31679332 + Fgfr3 protein_coding retained_intron MGP_WSBEiJ_T0069894.1 MGP_WSBEiJ_G0028641.1 mouse_genomes_project 5 31679023 31679983 + Fgfr3 protein_coding retained_intron MGP_WSBEiJ_T0008317.1 MGP_WSBEiJ_G0006754.1 mouse_genomes_project 5 153449866 153506433 - Gm15406 lincRNA lincRNA MGP_WSBEiJ_T0008319.1 MGP_WSBEiJ_G0006754.1 mouse_genomes_project 5 153455589 153506376 - Gm15406 lincRNA lincRNA MGP_WSBEiJ_T0072850.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124640838 124645159 + MGP_WSBEiJ_P0072850 Myl2 protein_coding protein_coding MGP_WSBEiJ_T0072851.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124640908 124646714 + MGP_WSBEiJ_P0072851 Myl2 protein_coding protein_coding MGP_WSBEiJ_T0072852.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124640913 124644902 + MGP_WSBEiJ_P0072852 Myl2 protein_coding protein_coding MGP_WSBEiJ_T0072853.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124641042 124642635 + Myl2 protein_coding processed_transcript MGP_WSBEiJ_T0072854.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124641461 124643789 + MGP_WSBEiJ_P0072854 Myl2 protein_coding protein_coding MGP_WSBEiJ_T0072855.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124641678 124644572 + MGP_WSBEiJ_P0072855 Myl2 protein_coding protein_coding MGP_WSBEiJ_T0072856.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124643059 124646706 + Myl2 protein_coding processed_transcript MGP_WSBEiJ_T0072857.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124643061 124646712 + Myl2 protein_coding processed_transcript MGP_WSBEiJ_T0072858.1 MGP_WSBEiJ_G0029218.1 mouse_genomes_project 5 124643773 124644869 + MGP_WSBEiJ_P0072858 Myl2 protein_coding protein_coding MGP_WSBEiJ_T0004767.1 MGP_WSBEiJ_G0004101.1 mouse_genomes_project 5 134749997 134759867 + 2810432F15Rik antisense antisense MGP_WSBEiJ_T0097410.1 MGP_WSBEiJ_G0036084.1 mouse_genomes_project 5 32158313 32161651 - sense_intronic sense_intronic MGP_WSBEiJ_T0073191.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127103003 127169643 - MGP_WSBEiJ_P0073191 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073192.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127103009 127168082 - MGP_WSBEiJ_P0073192 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073193.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127108836 127153978 - MGP_WSBEiJ_P0073193 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073194.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127111508 127121478 - Sbno1 protein_coding retained_intron MGP_WSBEiJ_T0073195.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127123291 127124263 - Sbno1 protein_coding retained_intron MGP_WSBEiJ_T0073196.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127128755 127129408 - Sbno1 protein_coding retained_intron MGP_WSBEiJ_T0073197.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127129404 127130916 - Sbno1 protein_coding retained_intron MGP_WSBEiJ_T0073198.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127131450 127168065 - MGP_WSBEiJ_P0073198 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073199.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127131466 127134748 - Sbno1 protein_coding retained_intron MGP_WSBEiJ_T0073200.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127131468 127169730 - MGP_WSBEiJ_P0073200 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073201.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127134413 127135610 - Sbno1 protein_coding retained_intron MGP_WSBEiJ_T0073202.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127134413 127169686 - MGP_WSBEiJ_P0073202 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073203.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127137093 127168064 - MGP_WSBEiJ_P0073203 Sbno1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073204.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127138466 127145344 - MGP_WSBEiJ_P0073204 Sbno1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073205.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127146724 127168056 - MGP_WSBEiJ_P0073205 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073206.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127149583 127168040 - MGP_WSBEiJ_P0073206 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073207.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127149815 127162374 - MGP_WSBEiJ_P0073207 Sbno1 protein_coding protein_coding MGP_WSBEiJ_T0073208.1 MGP_WSBEiJ_G0029270.1 mouse_genomes_project 5 127165984 127168014 - Sbno1 protein_coding retained_intron MGP_WSBEiJ_T0004779.1 MGP_WSBEiJ_G0004111.1 mouse_genomes_project 5 139272314 139274204 - Srrm3os antisense antisense MGP_WSBEiJ_T0071276.1 MGP_WSBEiJ_G0028892.1 mouse_genomes_project 5 88532993 88546750 + MGP_WSBEiJ_P0071276 Prol1 protein_coding protein_coding MGP_WSBEiJ_T0001744.1 MGP_WSBEiJ_G0001666.1 mouse_genomes_project 5 119924471 119924578 + TEC TEC MGP_WSBEiJ_T0070857.1 MGP_WSBEiJ_G0028802.1 mouse_genomes_project 5 71870956 71886018 - MGP_WSBEiJ_P0070857 Gm5868 protein_coding protein_coding MGP_WSBEiJ_T0072830.1 MGP_WSBEiJ_G0029215.1 mouse_genomes_project 5 124311694 124333633 - MGP_WSBEiJ_P0072830 Sh2b3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072831.1 MGP_WSBEiJ_G0029215.1 mouse_genomes_project 5 124311854 124333667 - MGP_WSBEiJ_P0072831 Sh2b3 protein_coding protein_coding MGP_WSBEiJ_T0072832.1 MGP_WSBEiJ_G0029215.1 mouse_genomes_project 5 124312518 124324938 - MGP_WSBEiJ_P0072832 Sh2b3 protein_coding protein_coding MGP_WSBEiJ_T0072833.1 MGP_WSBEiJ_G0029215.1 mouse_genomes_project 5 124313216 124332920 - MGP_WSBEiJ_P0072833 Sh2b3 protein_coding protein_coding MGP_WSBEiJ_T0072834.1 MGP_WSBEiJ_G0029215.1 mouse_genomes_project 5 124313422 124333658 - MGP_WSBEiJ_P0072834 Sh2b3 protein_coding protein_coding MGP_WSBEiJ_T0072835.1 MGP_WSBEiJ_G0029215.1 mouse_genomes_project 5 124313496 124333625 - MGP_WSBEiJ_P0072835 Sh2b3 protein_coding protein_coding MGP_WSBEiJ_T0072836.1 MGP_WSBEiJ_G0029215.1 mouse_genomes_project 5 124315313 124334454 - MGP_WSBEiJ_P0072836 Sh2b3 protein_coding protein_coding MGP_WSBEiJ_T0072837.1 MGP_WSBEiJ_G0029215.1 mouse_genomes_project 5 124324764 124333080 - MGP_WSBEiJ_P0072837 Sh2b3 protein_coding protein_coding MGP_WSBEiJ_T0001855.1 MGP_WSBEiJ_G0001775.1 mouse_genomes_project 5 147444345 147447083 + TEC TEC MGP_WSBEiJ_T0001777.1 MGP_WSBEiJ_G0001699.1 mouse_genomes_project 5 126223352 126223815 - TEC TEC MGP_WSBEiJ_T0069666.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29001937 29012645 + MGP_WSBEiJ_P0069666 Nrbp1 protein_coding protein_coding MGP_WSBEiJ_T0069667.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29001937 29012639 + MGP_WSBEiJ_P0069667 Nrbp1 protein_coding protein_coding MGP_WSBEiJ_T0069668.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29001950 29006028 + MGP_WSBEiJ_P0069668 Nrbp1 protein_coding protein_coding MGP_WSBEiJ_T0069669.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29001968 29006914 + Nrbp1 protein_coding retained_intron MGP_WSBEiJ_T0069670.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29001976 29005949 + MGP_WSBEiJ_P0069670 Nrbp1 protein_coding protein_coding MGP_WSBEiJ_T0069671.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29002005 29008993 + MGP_WSBEiJ_P0069671 Nrbp1 protein_coding protein_coding MGP_WSBEiJ_T0069672.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29004494 29005503 + Nrbp1 protein_coding retained_intron MGP_WSBEiJ_T0069673.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29008501 29011060 + Nrbp1 protein_coding retained_intron MGP_WSBEiJ_T0069674.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29010433 29012642 + Nrbp1 protein_coding retained_intron MGP_WSBEiJ_T0069675.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29010669 29011812 + Nrbp1 protein_coding retained_intron MGP_WSBEiJ_T0069676.1 MGP_WSBEiJ_G0028609.1 mouse_genomes_project 5 29011423 29012528 + Nrbp1 protein_coding retained_intron MGP_WSBEiJ_T0098340.1 MGP_WSBEiJ_G0037003.1 mouse_genomes_project 5 36804456 36804563 - Gm22779 snRNA snRNA MGP_WSBEiJ_T0070164.1 MGP_WSBEiJ_G0028682.1 mouse_genomes_project 5 34781080 34782353 - MGP_WSBEiJ_P0070164 Bloc1s4 protein_coding protein_coding MGP_WSBEiJ_T0004581.1 MGP_WSBEiJ_G0003966.1 mouse_genomes_project 5 30154809 30192412 - Gm36840 antisense antisense MGP_WSBEiJ_T0074662.1 MGP_WSBEiJ_G0029553.1 mouse_genomes_project 5 151064646 151128174 - MGP_WSBEiJ_P0074662 Usp12 protein_coding protein_coding MGP_WSBEiJ_T0074663.1 MGP_WSBEiJ_G0029553.1 mouse_genomes_project 5 151064676 151087973 - Usp12 protein_coding processed_transcript MGP_WSBEiJ_T0074664.1 MGP_WSBEiJ_G0029553.1 mouse_genomes_project 5 151070367 151087981 - Usp12 protein_coding processed_transcript MGP_WSBEiJ_T0069822.1 MGP_WSBEiJ_G0028631.1 mouse_genomes_project 5 31085478 31103159 - Spon2 protein_coding retained_intron MGP_WSBEiJ_T0069823.1 MGP_WSBEiJ_G0028631.1 mouse_genomes_project 5 31101136 31105665 - MGP_WSBEiJ_P0069823 Spon2 protein_coding protein_coding MGP_WSBEiJ_T0069824.1 MGP_WSBEiJ_G0028631.1 mouse_genomes_project 5 31101143 31105395 - Spon2 protein_coding retained_intron MGP_WSBEiJ_T0069825.1 MGP_WSBEiJ_G0028631.1 mouse_genomes_project 5 31101144 31103170 - Spon2 protein_coding retained_intron MGP_WSBEiJ_T0069826.1 MGP_WSBEiJ_G0028631.1 mouse_genomes_project 5 31103638 31105405 - MGP_WSBEiJ_P0069826 Spon2 protein_coding protein_coding MGP_WSBEiJ_T0008017.1 MGP_WSBEiJ_G0006543.1 mouse_genomes_project 5 63494838 63508028 - 1700027F09Rik lincRNA lincRNA MGP_WSBEiJ_T0070078.1 MGP_WSBEiJ_G0028669.1 mouse_genomes_project 5 33560751 33579309 - MGP_WSBEiJ_P0070078 Trmt44 protein_coding protein_coding MGP_WSBEiJ_T0070079.1 MGP_WSBEiJ_G0028669.1 mouse_genomes_project 5 33576732 33579290 - Trmt44 protein_coding retained_intron MGP_WSBEiJ_T0070080.1 MGP_WSBEiJ_G0028669.1 mouse_genomes_project 5 33576984 33578913 - MGP_WSBEiJ_P0070080 Trmt44 protein_coding protein_coding MGP_WSBEiJ_T0004707.1 MGP_WSBEiJ_G0004061.1 mouse_genomes_project 5 116784312 116814856 + Hnf1aos1 antisense antisense MGP_WSBEiJ_T0004709.1 MGP_WSBEiJ_G0004061.1 mouse_genomes_project 5 116785425 116801345 + Hnf1aos1 antisense antisense MGP_WSBEiJ_T0004710.1 MGP_WSBEiJ_G0004061.1 mouse_genomes_project 5 116785448 116815049 + Hnf1aos1 antisense antisense MGP_WSBEiJ_T0014461.1 MGP_WSBEiJ_G0012591.1 mouse_genomes_project 5 20335986 20336603 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001634.1 MGP_WSBEiJ_G0001557.1 mouse_genomes_project 5 68519631 68523341 - TEC TEC MGP_WSBEiJ_T0068959.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5664815 5775062 + Abcb1b protein_coding retained_intron MGP_WSBEiJ_T0068962.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5741037 5798978 + MGP_WSBEiJ_P0068962 Abcb1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068963.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5741043 5759334 + MGP_WSBEiJ_P0068963 Abcb1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068964.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5741076 5816670 + MGP_WSBEiJ_P0068964 Abcb1b protein_coding protein_coding MGP_WSBEiJ_T0068965.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5741632 5816306 + MGP_WSBEiJ_P0068965 Abcb1b protein_coding unknown_likely_coding MGP_WSBEiJ_T0068966.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5787638 5802782 + Abcb1b protein_coding processed_transcript MGP_WSBEiJ_T0068967.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5798489 5798978 + Abcb1b protein_coding retained_intron MGP_WSBEiJ_T0068968.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5800542 5802941 + Abcb1b protein_coding retained_intron MGP_WSBEiJ_T0068969.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5800747 5816291 + MGP_WSBEiJ_P0068969 Abcb1b protein_coding protein_coding MGP_WSBEiJ_T0068970.1 MGP_WSBEiJ_G0028480.1 mouse_genomes_project 5 5801015 5804041 + Abcb1b protein_coding retained_intron MGP_WSBEiJ_T0017534.1 MGP_WSBEiJ_G0015013.1 mouse_genomes_project 5 28688967 28693996 + Abhd1 processed_transcript processed_transcript MGP_WSBEiJ_T0017535.1 MGP_WSBEiJ_G0015013.1 mouse_genomes_project 5 28688967 28692308 + Abhd1 processed_transcript processed_transcript MGP_WSBEiJ_T0017536.1 MGP_WSBEiJ_G0015013.1 mouse_genomes_project 5 28688990 28693994 + Abhd1 processed_transcript retained_intron MGP_WSBEiJ_T0017537.1 MGP_WSBEiJ_G0015013.1 mouse_genomes_project 5 28688990 28692618 + Abhd1 processed_transcript processed_transcript MGP_WSBEiJ_T0017538.1 MGP_WSBEiJ_G0015013.1 mouse_genomes_project 5 28688993 28693604 + Abhd1 processed_transcript processed_transcript MGP_WSBEiJ_T0017539.1 MGP_WSBEiJ_G0015013.1 mouse_genomes_project 5 28689007 28693994 + Abhd1 processed_transcript processed_transcript MGP_WSBEiJ_T0017540.1 MGP_WSBEiJ_G0015013.1 mouse_genomes_project 5 28692278 28693089 + Abhd1 processed_transcript retained_intron MGP_WSBEiJ_T0004565.1 MGP_WSBEiJ_G0003953.1 mouse_genomes_project 5 20632441 20656267 - Gm42948 antisense antisense MGP_WSBEiJ_T0001727.1 MGP_WSBEiJ_G0001649.1 mouse_genomes_project 5 114965628 114966920 + TEC TEC MGP_WSBEiJ_T0073116.1 MGP_WSBEiJ_G0029256.1 mouse_genomes_project 5 126442937 126447659 + Kntc1 protein_coding retained_intron MGP_WSBEiJ_T0073117.1 MGP_WSBEiJ_G0029256.1 mouse_genomes_project 5 126442947 126516828 + MGP_WSBEiJ_P0073117 Kntc1 protein_coding protein_coding MGP_WSBEiJ_T0073118.1 MGP_WSBEiJ_G0029256.1 mouse_genomes_project 5 126468003 126474869 + Kntc1 protein_coding processed_transcript MGP_WSBEiJ_T0073119.1 MGP_WSBEiJ_G0029256.1 mouse_genomes_project 5 126476415 126477306 + MGP_WSBEiJ_P0073119 Kntc1 protein_coding protein_coding MGP_WSBEiJ_T0073120.1 MGP_WSBEiJ_G0029256.1 mouse_genomes_project 5 126482439 126485354 + Kntc1 protein_coding retained_intron MGP_WSBEiJ_T0073121.1 MGP_WSBEiJ_G0029256.1 mouse_genomes_project 5 126506622 126516826 + MGP_WSBEiJ_P0073121 Kntc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073122.1 MGP_WSBEiJ_G0029256.1 mouse_genomes_project 5 126514781 126516827 + Kntc1 protein_coding retained_intron MGP_WSBEiJ_T0001650.1 MGP_WSBEiJ_G0001572.1 mouse_genomes_project 5 73468148 73468898 + TEC TEC MGP_WSBEiJ_T0008234.1 MGP_WSBEiJ_G0006694.1 mouse_genomes_project 5 127991441 128027612 - Gm42637 lincRNA lincRNA MGP_WSBEiJ_T0071886.1 MGP_WSBEiJ_G0029032.1 mouse_genomes_project 5 109014238 109025440 + MGP_WSBEiJ_P0071886 Rpl5 protein_coding protein_coding MGP_WSBEiJ_T0071887.1 MGP_WSBEiJ_G0029032.1 mouse_genomes_project 5 109014308 109020566 + Rpl5 protein_coding retained_intron MGP_WSBEiJ_T0071888.1 MGP_WSBEiJ_G0029032.1 mouse_genomes_project 5 109015857 109020328 + Rpl5 protein_coding retained_intron MGP_WSBEiJ_T0071889.1 MGP_WSBEiJ_G0029032.1 mouse_genomes_project 5 109020556 109024485 + Rpl5 protein_coding retained_intron MGP_WSBEiJ_T0071890.1 MGP_WSBEiJ_G0029032.1 mouse_genomes_project 5 109023056 109024490 + Rpl5 protein_coding retained_intron MGP_WSBEiJ_T0001557.1 MGP_WSBEiJ_G0001481.1 mouse_genomes_project 5 52420220 52424291 + TEC TEC MGP_WSBEiJ_T0008310.1 MGP_WSBEiJ_G0006747.1 mouse_genomes_project 5 151814122 151817696 + D5Ertd605e lincRNA lincRNA MGP_WSBEiJ_T0001626.1 MGP_WSBEiJ_G0001549.1 mouse_genomes_project 5 67081033 67082332 - TEC TEC MGP_WSBEiJ_T0004629.1 MGP_WSBEiJ_G0004005.1 mouse_genomes_project 5 66877256 66881590 + Gm15478 antisense antisense MGP_WSBEiJ_T0001747.1 MGP_WSBEiJ_G0001669.1 mouse_genomes_project 5 120715284 120717700 + TEC TEC MGP_WSBEiJ_T0008287.1 MGP_WSBEiJ_G0006727.1 mouse_genomes_project 5 141267199 141272417 - Gm15498 lincRNA lincRNA MGP_WSBEiJ_T0098360.1 MGP_WSBEiJ_G0037023.1 mouse_genomes_project 5 85799299 85799460 + Gm24626 snRNA snRNA MGP_WSBEiJ_T0070847.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71803574 71847049 - MGP_WSBEiJ_P0070847 Nfxl1 protein_coding protein_coding MGP_WSBEiJ_T0070848.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71803577 71847010 - MGP_WSBEiJ_P0070848 Nfxl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070849.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71803788 71807771 - Nfxl1 protein_coding retained_intron MGP_WSBEiJ_T0070850.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71807318 71814305 - Nfxl1 protein_coding retained_intron MGP_WSBEiJ_T0070851.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71813845 71817722 - Nfxl1 protein_coding retained_intron MGP_WSBEiJ_T0070852.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71833902 71846964 - MGP_WSBEiJ_P0070852 Nfxl1 protein_coding protein_coding MGP_WSBEiJ_T0070853.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71837619 71846777 - Nfxl1 protein_coding retained_intron MGP_WSBEiJ_T0070854.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71837621 71847013 - Nfxl1 protein_coding retained_intron MGP_WSBEiJ_T0070855.1 MGP_WSBEiJ_G0028800.1 mouse_genomes_project 5 71842848 71846988 - Nfxl1 protein_coding retained_intron MGP_WSBEiJ_T0008245.1 MGP_WSBEiJ_G0006699.1 mouse_genomes_project 5 129319286 129320408 - Gm42592 lincRNA lincRNA MGP_WSBEiJ_T0011409.1 MGP_WSBEiJ_G0009566.1 mouse_genomes_project 5 113771358 113771508 - Gm27627 misc_RNA misc_RNA MGP_WSBEiJ_T0008311.1 MGP_WSBEiJ_G0006748.1 mouse_genomes_project 5 152162920 152166580 + Gm43156 lincRNA lincRNA MGP_WSBEiJ_T0014758.1 MGP_WSBEiJ_G0012888.1 mouse_genomes_project 5 150545533 150546405 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097063.1 MGP_WSBEiJ_G0035744.1 mouse_genomes_project 5 51600233 51600312 + n-R5s171 rRNA rRNA MGP_WSBEiJ_T0004689.1 MGP_WSBEiJ_G0004046.1 mouse_genomes_project 5 109993806 110148667 + antisense antisense MGP_WSBEiJ_T0001724.1 MGP_WSBEiJ_G0001646.1 mouse_genomes_project 5 114759247 114759628 + TEC TEC MGP_WSBEiJ_T0001553.1 MGP_WSBEiJ_G0001477.1 mouse_genomes_project 5 50519772 50522728 - TEC TEC MGP_WSBEiJ_T0014427.1 MGP_WSBEiJ_G0012557.1 mouse_genomes_project 5 7676159 7676628 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072381.1 MGP_WSBEiJ_G0029125.1 mouse_genomes_project 5 116560643 116593293 + MGP_WSBEiJ_P0072381 Ankrd13a protein_coding protein_coding MGP_WSBEiJ_T0072382.1 MGP_WSBEiJ_G0029125.1 mouse_genomes_project 5 116560910 116593670 + Ankrd13a protein_coding processed_transcript MGP_WSBEiJ_T0072383.1 MGP_WSBEiJ_G0029125.1 mouse_genomes_project 5 116573508 116591082 + MGP_WSBEiJ_P0072383 Ankrd13a protein_coding protein_coding MGP_WSBEiJ_T0072384.1 MGP_WSBEiJ_G0029125.1 mouse_genomes_project 5 116583209 116593670 + Ankrd13a protein_coding processed_transcript MGP_WSBEiJ_T0072385.1 MGP_WSBEiJ_G0029125.1 mouse_genomes_project 5 116586927 116593670 + Ankrd13a protein_coding processed_transcript MGP_WSBEiJ_T0072386.1 MGP_WSBEiJ_G0029125.1 mouse_genomes_project 5 116587041 116589034 + Ankrd13a protein_coding retained_intron MGP_WSBEiJ_T0014698.1 MGP_WSBEiJ_G0012828.1 mouse_genomes_project 5 123861658 123862480 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014660.1 MGP_WSBEiJ_G0012790.1 mouse_genomes_project 5 108330760 108331505 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001793.1 MGP_WSBEiJ_G0001714.1 mouse_genomes_project 5 131178561 131181806 - TEC TEC MGP_WSBEiJ_T0004593.1 MGP_WSBEiJ_G0003978.1 mouse_genomes_project 5 35088017 35091497 - Gm26647 antisense antisense MGP_WSBEiJ_T0069374.1 MGP_WSBEiJ_G0028557.1 mouse_genomes_project 5 25749058 25758196 + MGP_WSBEiJ_P0069374 Insig1 protein_coding protein_coding MGP_WSBEiJ_T0069375.1 MGP_WSBEiJ_G0028557.1 mouse_genomes_project 5 25752361 25755816 + Insig1 protein_coding retained_intron MGP_WSBEiJ_T0001618.1 MGP_WSBEiJ_G0001541.1 mouse_genomes_project 5 66134562 66137264 + TEC TEC MGP_WSBEiJ_T0071342.1 MGP_WSBEiJ_G0028910.1 mouse_genomes_project 5 90808129 90825959 + MGP_WSBEiJ_P0071342 Afp protein_coding protein_coding MGP_WSBEiJ_T0071343.1 MGP_WSBEiJ_G0028910.1 mouse_genomes_project 5 90808131 90813107 + MGP_WSBEiJ_P0071343 Afp protein_coding protein_coding MGP_WSBEiJ_T0071344.1 MGP_WSBEiJ_G0028910.1 mouse_genomes_project 5 90808377 90813157 + Afp protein_coding retained_intron MGP_WSBEiJ_T0071345.1 MGP_WSBEiJ_G0028910.1 mouse_genomes_project 5 90818582 90821221 + Afp protein_coding retained_intron MGP_WSBEiJ_T0071346.1 MGP_WSBEiJ_G0028910.1 mouse_genomes_project 5 90824481 90825903 + Afp protein_coding retained_intron MGP_WSBEiJ_T0069118.1 MGP_WSBEiJ_G0028508.1 mouse_genomes_project 5 19015303 19034511 + MGP_WSBEiJ_P0069118 Armc10 protein_coding protein_coding MGP_WSBEiJ_T0069119.1 MGP_WSBEiJ_G0028508.1 mouse_genomes_project 5 19015441 19018073 + Armc10 protein_coding processed_transcript MGP_WSBEiJ_T0069120.1 MGP_WSBEiJ_G0028508.1 mouse_genomes_project 5 19017922 19021414 + Armc10 protein_coding retained_intron MGP_WSBEiJ_T0069166.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20893172 20947821 + MGP_WSBEiJ_P0069166 Kmt2e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069167.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20893172 20965686 + MGP_WSBEiJ_P0069167 Kmt2e protein_coding protein_coding MGP_WSBEiJ_T0069168.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20893180 20965686 + MGP_WSBEiJ_P0069168 Kmt2e protein_coding protein_coding MGP_WSBEiJ_T0069169.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20939997 20946872 + Kmt2e protein_coding processed_transcript MGP_WSBEiJ_T0069170.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20946921 20957132 + MGP_WSBEiJ_P0069170 Kmt2e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069171.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20946969 20964315 + MGP_WSBEiJ_P0069171 Kmt2e protein_coding protein_coding MGP_WSBEiJ_T0069172.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20953802 20961404 + MGP_WSBEiJ_P0069172 Kmt2e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069173.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20954339 20957282 + Kmt2e protein_coding retained_intron MGP_WSBEiJ_T0069174.1 MGP_WSBEiJ_G0028518.1 mouse_genomes_project 5 20959195 20961447 + MGP_WSBEiJ_P0069174 Kmt2e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068943.1 MGP_WSBEiJ_G0028476.1 mouse_genomes_project 5 5321782 5348197 - MGP_WSBEiJ_P0068943 Dbf4 protein_coding protein_coding MGP_WSBEiJ_T0068944.1 MGP_WSBEiJ_G0028476.1 mouse_genomes_project 5 5321820 5348233 - MGP_WSBEiJ_P0068944 Dbf4 protein_coding protein_coding MGP_WSBEiJ_T0068945.1 MGP_WSBEiJ_G0028476.1 mouse_genomes_project 5 5321963 5348099 - MGP_WSBEiJ_P0068945 Dbf4 protein_coding protein_coding MGP_WSBEiJ_T0068946.1 MGP_WSBEiJ_G0028476.1 mouse_genomes_project 5 5322661 5325115 - Dbf4 protein_coding retained_intron MGP_WSBEiJ_T0068948.1 MGP_WSBEiJ_G0028476.1 mouse_genomes_project 5 5326450 5348198 - Dbf4 protein_coding retained_intron MGP_WSBEiJ_T0068949.1 MGP_WSBEiJ_G0028476.1 mouse_genomes_project 5 5327932 5330031 - Dbf4 protein_coding retained_intron MGP_WSBEiJ_T0068950.1 MGP_WSBEiJ_G0028476.1 mouse_genomes_project 5 5343998 5348211 - Dbf4 protein_coding processed_transcript MGP_WSBEiJ_T0068951.1 MGP_WSBEiJ_G0028476.1 mouse_genomes_project 5 5347700 5348186 - Dbf4 protein_coding retained_intron MGP_WSBEiJ_T0097059.1 MGP_WSBEiJ_G0035740.1 mouse_genomes_project 5 400998 401118 + n-R5s169 rRNA rRNA MGP_WSBEiJ_T0007910.1 MGP_WSBEiJ_G0006467.1 mouse_genomes_project 5 2765010 2767327 + lincRNA lincRNA MGP_WSBEiJ_T0070379.1 MGP_WSBEiJ_G0028722.1 mouse_genomes_project 5 43735611 43754874 + MGP_WSBEiJ_P0070379 Lap3 protein_coding protein_coding MGP_WSBEiJ_T0070380.1 MGP_WSBEiJ_G0028722.1 mouse_genomes_project 5 43735741 43743021 + Lap3 protein_coding retained_intron MGP_WSBEiJ_T0070381.1 MGP_WSBEiJ_G0028722.1 mouse_genomes_project 5 43735763 43745644 + MGP_WSBEiJ_P0070381 Lap3 protein_coding protein_coding MGP_WSBEiJ_T0070382.1 MGP_WSBEiJ_G0028722.1 mouse_genomes_project 5 43740481 43747064 + Lap3 protein_coding retained_intron MGP_WSBEiJ_T0070383.1 MGP_WSBEiJ_G0028722.1 mouse_genomes_project 5 43742614 43747035 + Lap3 protein_coding retained_intron MGP_WSBEiJ_T0070384.1 MGP_WSBEiJ_G0028722.1 mouse_genomes_project 5 43751386 43753558 + Lap3 protein_coding retained_intron MGP_WSBEiJ_T0073911.1 MGP_WSBEiJ_G0029395.1 mouse_genomes_project 5 140683471 140697827 - MGP_WSBEiJ_P0073911 Muc3 protein_coding protein_coding MGP_WSBEiJ_T0073912.1 MGP_WSBEiJ_G0029395.1 mouse_genomes_project 5 140683510 140687663 - Muc3 protein_coding processed_transcript MGP_WSBEiJ_T0073484.1 MGP_WSBEiJ_G0029323.1 mouse_genomes_project 5 133422748 133931964 + MGP_WSBEiJ_P0073484 Caln1 protein_coding protein_coding MGP_WSBEiJ_T0073487.1 MGP_WSBEiJ_G0029323.1 mouse_genomes_project 5 133438699 133574104 + MGP_WSBEiJ_P0073487 Caln1 protein_coding protein_coding MGP_WSBEiJ_T0073488.1 MGP_WSBEiJ_G0029323.1 mouse_genomes_project 5 133509476 133694947 + MGP_WSBEiJ_P0073488 Caln1 protein_coding protein_coding MGP_WSBEiJ_T0073489.1 MGP_WSBEiJ_G0029323.1 mouse_genomes_project 5 133510039 133932425 + MGP_WSBEiJ_P0073489 Caln1 protein_coding protein_coding MGP_WSBEiJ_T0073490.1 MGP_WSBEiJ_G0029323.1 mouse_genomes_project 5 133510830 133939195 + MGP_WSBEiJ_P0073490 Caln1 protein_coding protein_coding MGP_WSBEiJ_T0073392.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737503 132744567 + MGP_WSBEiJ_P0073392 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073393.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737509 132740491 + MGP_WSBEiJ_P0073393 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073394.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737510 132740408 + MGP_WSBEiJ_P0073394 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073395.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737515 132740030 + MGP_WSBEiJ_P0073395 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073396.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737517 132740886 + MGP_WSBEiJ_P0073396 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073397.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737522 132740702 + MGP_WSBEiJ_P0073397 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073398.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737524 132739352 + Mrps17 protein_coding retained_intron MGP_WSBEiJ_T0073399.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737540 132740065 + MGP_WSBEiJ_P0073399 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073400.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737564 132740301 + MGP_WSBEiJ_P0073400 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073401.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737583 132740458 + MGP_WSBEiJ_P0073401 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0073402.1 MGP_WSBEiJ_G0029306.1 mouse_genomes_project 5 132737703 132738840 + MGP_WSBEiJ_P0073402 Mrps17 protein_coding protein_coding MGP_WSBEiJ_T0071834.1 MGP_WSBEiJ_G0029021.1 mouse_genomes_project 5 108496132 108507005 + MGP_WSBEiJ_P0071834 Ephx4 protein_coding protein_coding MGP_WSBEiJ_T0071835.1 MGP_WSBEiJ_G0029021.1 mouse_genomes_project 5 108496890 108523393 + MGP_WSBEiJ_P0071835 Ephx4 protein_coding protein_coding MGP_WSBEiJ_T0071836.1 MGP_WSBEiJ_G0029021.1 mouse_genomes_project 5 108497169 108506913 + MGP_WSBEiJ_P0071836 Ephx4 protein_coding protein_coding MGP_WSBEiJ_T0071837.1 MGP_WSBEiJ_G0029021.1 mouse_genomes_project 5 108499194 108506973 + MGP_WSBEiJ_P0071837 Ephx4 protein_coding protein_coding MGP_WSBEiJ_T0070294.1 MGP_WSBEiJ_G0028706.1 mouse_genomes_project 5 39794593 39879463 - MGP_WSBEiJ_P0070294 Rab28 protein_coding protein_coding MGP_WSBEiJ_T0070295.1 MGP_WSBEiJ_G0028706.1 mouse_genomes_project 5 39794593 39879496 - MGP_WSBEiJ_P0070295 Rab28 protein_coding protein_coding MGP_WSBEiJ_T0070296.1 MGP_WSBEiJ_G0028706.1 mouse_genomes_project 5 39794594 39879499 - MGP_WSBEiJ_P0070296 Rab28 protein_coding protein_coding MGP_WSBEiJ_T0070297.1 MGP_WSBEiJ_G0028706.1 mouse_genomes_project 5 39795350 39797124 - Rab28 protein_coding retained_intron MGP_WSBEiJ_T0070298.1 MGP_WSBEiJ_G0028706.1 mouse_genomes_project 5 39795844 39798739 - Rab28 protein_coding retained_intron MGP_WSBEiJ_T0001427.1 MGP_WSBEiJ_G0001355.1 mouse_genomes_project 5 13789593 13791089 + TEC TEC MGP_WSBEiJ_T0004573.1 MGP_WSBEiJ_G0003960.1 mouse_genomes_project 5 26150540 26635366 + antisense antisense MGP_WSBEiJ_T0004574.1 MGP_WSBEiJ_G0003960.1 mouse_genomes_project 5 26159237 26408522 + antisense antisense MGP_WSBEiJ_T0074080.1 MGP_WSBEiJ_G0029427.1 mouse_genomes_project 5 141546246 141559457 - MGP_WSBEiJ_P0074080 Gjc3 protein_coding protein_coding MGP_WSBEiJ_T0074081.1 MGP_WSBEiJ_G0029427.1 mouse_genomes_project 5 141558871 141559454 - Gjc3 protein_coding retained_intron MGP_WSBEiJ_T0098375.1 MGP_WSBEiJ_G0037038.1 mouse_genomes_project 5 112134898 112135005 - Gm22716 snRNA snRNA MGP_WSBEiJ_T0068958.1 MGP_WSBEiJ_G0028479.1 mouse_genomes_project 5 5619764 5704891 + MGP_WSBEiJ_P0068958 Abcb1a protein_coding protein_coding MGP_WSBEiJ_T0068960.1 MGP_WSBEiJ_G0028479.1 mouse_genomes_project 5 5673821 5704886 + Abcb1a protein_coding retained_intron MGP_WSBEiJ_T0068961.1 MGP_WSBEiJ_G0028479.1 mouse_genomes_project 5 5673851 5677461 + Abcb1a protein_coding processed_transcript MGP_WSBEiJ_T0073641.1 MGP_WSBEiJ_G0029346.1 mouse_genomes_project 5 138370238 138373227 + MGP_WSBEiJ_P0073641 Abhd11 protein_coding protein_coding MGP_WSBEiJ_T0073642.1 MGP_WSBEiJ_G0029346.1 mouse_genomes_project 5 138370385 138373271 + MGP_WSBEiJ_P0073642 Abhd11 protein_coding protein_coding MGP_WSBEiJ_T0073643.1 MGP_WSBEiJ_G0029346.1 mouse_genomes_project 5 138370499 138371144 + MGP_WSBEiJ_P0073643 Abhd11 protein_coding protein_coding MGP_WSBEiJ_T0073644.1 MGP_WSBEiJ_G0029346.1 mouse_genomes_project 5 138370542 138373266 + MGP_WSBEiJ_P0073644 Abhd11 protein_coding protein_coding MGP_WSBEiJ_T0073645.1 MGP_WSBEiJ_G0029346.1 mouse_genomes_project 5 138370775 138373266 + MGP_WSBEiJ_P0073645 Abhd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073646.1 MGP_WSBEiJ_G0029346.1 mouse_genomes_project 5 138370790 138373266 + MGP_WSBEiJ_P0073646 Abhd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073647.1 MGP_WSBEiJ_G0029346.1 mouse_genomes_project 5 138371057 138373072 + MGP_WSBEiJ_P0073647 Abhd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069357.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 24453299 24490211 + Dpp6 protein_coding processed_transcript MGP_WSBEiJ_T0069358.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 24453453 25398557 + MGP_WSBEiJ_P0069358 Dpp6 protein_coding protein_coding MGP_WSBEiJ_T0069359.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 24453530 25109861 + Dpp6 protein_coding retained_intron MGP_WSBEiJ_T0069360.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 24545540 25399591 + MGP_WSBEiJ_P0069360 Dpp6 protein_coding protein_coding MGP_WSBEiJ_T0069361.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 24696189 25399587 + MGP_WSBEiJ_P0069361 Dpp6 protein_coding protein_coding MGP_WSBEiJ_T0069362.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 24696383 24699117 + Dpp6 protein_coding retained_intron MGP_WSBEiJ_T0069363.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 24922089 25399586 + MGP_WSBEiJ_P0069363 Dpp6 protein_coding protein_coding MGP_WSBEiJ_T0069364.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 24922089 25049280 + MGP_WSBEiJ_P0069364 Dpp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069365.1 MGP_WSBEiJ_G0028554.1 mouse_genomes_project 5 25199639 25367574 + Dpp6 protein_coding retained_intron MGP_WSBEiJ_T0014426.1 MGP_WSBEiJ_G0012556.1 mouse_genomes_project 5 7098889 7100354 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001613.1 MGP_WSBEiJ_G0001536.1 mouse_genomes_project 5 65713533 65715472 - TEC TEC MGP_WSBEiJ_T0068782.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 440850 482801 + MGP_WSBEiJ_P0068782 Pex1 protein_coding protein_coding MGP_WSBEiJ_T0068783.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 440850 482803 + MGP_WSBEiJ_P0068783 Pex1 protein_coding protein_coding MGP_WSBEiJ_T0068784.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 440983 451222 + MGP_WSBEiJ_P0068784 Pex1 protein_coding protein_coding MGP_WSBEiJ_T0068785.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 441155 468285 + MGP_WSBEiJ_P0068785 Pex1 protein_coding protein_coding MGP_WSBEiJ_T0068786.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 450181 451481 + Pex1 protein_coding retained_intron MGP_WSBEiJ_T0068787.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 451561 464964 + MGP_WSBEiJ_P0068787 Pex1 protein_coding protein_coding MGP_WSBEiJ_T0068788.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 454978 462373 + Pex1 protein_coding retained_intron MGP_WSBEiJ_T0068789.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 463151 468758 + MGP_WSBEiJ_P0068789 Pex1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068790.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 464024 465010 + Pex1 protein_coding retained_intron MGP_WSBEiJ_T0068791.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 468319 468722 + Pex1 protein_coding retained_intron MGP_WSBEiJ_T0068792.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 471457 472095 + Pex1 protein_coding retained_intron MGP_WSBEiJ_T0068794.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 480741 481482 + Pex1 protein_coding retained_intron MGP_WSBEiJ_T0068795.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 481185 482532 + Pex1 protein_coding retained_intron MGP_WSBEiJ_T0068796.1 MGP_WSBEiJ_G0028453.1 mouse_genomes_project 5 481721 482389 + Pex1 protein_coding retained_intron MGP_WSBEiJ_T0014721.1 MGP_WSBEiJ_G0012851.1 mouse_genomes_project 5 140985804 140986081 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007934.1 MGP_WSBEiJ_G0006482.1 mouse_genomes_project 5 21357729 21362983 + 2700038G22Rik lincRNA lincRNA MGP_WSBEiJ_T0098332.1 MGP_WSBEiJ_G0036995.1 mouse_genomes_project 5 27186918 27187025 - Gm24538 snRNA snRNA MGP_WSBEiJ_T0007935.1 MGP_WSBEiJ_G0006483.1 mouse_genomes_project 5 21993005 21993587 + 2310074N15Rik lincRNA lincRNA MGP_WSBEiJ_T0007917.1 MGP_WSBEiJ_G0006473.1 mouse_genomes_project 5 12987817 13009702 - 4930519H02Rik lincRNA lincRNA MGP_WSBEiJ_T0007918.1 MGP_WSBEiJ_G0006473.1 mouse_genomes_project 5 12992429 13009765 - 4930519H02Rik lincRNA lincRNA MGP_WSBEiJ_T0071766.1 MGP_WSBEiJ_G0029010.1 mouse_genomes_project 5 106427886 106497818 + MGP_WSBEiJ_P0071766 Lrrc8b protein_coding protein_coding MGP_WSBEiJ_T0001783.1 MGP_WSBEiJ_G0001705.1 mouse_genomes_project 5 127167168 127170479 + TEC TEC MGP_WSBEiJ_T0001784.1 MGP_WSBEiJ_G0001705.1 mouse_genomes_project 5 127169434 127170608 + TEC TEC MGP_WSBEiJ_T0069895.1 MGP_WSBEiJ_G0028642.1 mouse_genomes_project 5 31684036 31727460 - MGP_WSBEiJ_P0069895 Letm1 protein_coding protein_coding MGP_WSBEiJ_T0069896.1 MGP_WSBEiJ_G0028642.1 mouse_genomes_project 5 31686897 31699032 - Letm1 protein_coding retained_intron MGP_WSBEiJ_T0069897.1 MGP_WSBEiJ_G0028642.1 mouse_genomes_project 5 31706405 31723315 - MGP_WSBEiJ_P0069897 Letm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069898.1 MGP_WSBEiJ_G0028642.1 mouse_genomes_project 5 31714059 31727357 - Letm1 protein_coding processed_transcript MGP_WSBEiJ_T0069899.1 MGP_WSBEiJ_G0028642.1 mouse_genomes_project 5 31714258 31715151 - Letm1 protein_coding processed_transcript MGP_WSBEiJ_T0069900.1 MGP_WSBEiJ_G0028642.1 mouse_genomes_project 5 31721124 31727380 - MGP_WSBEiJ_P0069900 Letm1 protein_coding protein_coding MGP_WSBEiJ_T0074488.1 MGP_WSBEiJ_G0029513.1 mouse_genomes_project 5 147928284 147933833 - MGP_WSBEiJ_P0074488 Ankrd61 protein_coding protein_coding MGP_WSBEiJ_T0074489.1 MGP_WSBEiJ_G0029513.1 mouse_genomes_project 5 147928284 147933870 - MGP_WSBEiJ_P0074489 Ankrd61 protein_coding protein_coding MGP_WSBEiJ_T0074490.1 MGP_WSBEiJ_G0029513.1 mouse_genomes_project 5 147928286 147936527 - MGP_WSBEiJ_P0074490 Ankrd61 protein_coding protein_coding MGP_WSBEiJ_T0073458.1 MGP_WSBEiJ_G0029318.1 mouse_genomes_project 5 133178858 133189765 + MGP_WSBEiJ_P0073458 Kctd7 protein_coding protein_coding MGP_WSBEiJ_T0073459.1 MGP_WSBEiJ_G0029318.1 mouse_genomes_project 5 133178921 133185691 + MGP_WSBEiJ_P0073459 Kctd7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073460.1 MGP_WSBEiJ_G0029318.1 mouse_genomes_project 5 133179101 133186453 + MGP_WSBEiJ_P0073460 Kctd7 protein_coding protein_coding MGP_WSBEiJ_T0074115.1 MGP_WSBEiJ_G0029434.1 mouse_genomes_project 5 141764009 141772413 + MGP_WSBEiJ_P0074115 Ap4m1 protein_coding protein_coding MGP_WSBEiJ_T0074116.1 MGP_WSBEiJ_G0029434.1 mouse_genomes_project 5 141764012 141767016 + MGP_WSBEiJ_P0074116 Ap4m1 protein_coding protein_coding MGP_WSBEiJ_T0074117.1 MGP_WSBEiJ_G0029434.1 mouse_genomes_project 5 141764054 141766375 + Ap4m1 protein_coding retained_intron MGP_WSBEiJ_T0074118.1 MGP_WSBEiJ_G0029434.1 mouse_genomes_project 5 141764075 141770682 + MGP_WSBEiJ_P0074118 Ap4m1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074119.1 MGP_WSBEiJ_G0029434.1 mouse_genomes_project 5 141764590 141766947 + Ap4m1 protein_coding retained_intron MGP_WSBEiJ_T0074120.1 MGP_WSBEiJ_G0029434.1 mouse_genomes_project 5 141766788 141769201 + Ap4m1 protein_coding retained_intron MGP_WSBEiJ_T0074121.1 MGP_WSBEiJ_G0029434.1 mouse_genomes_project 5 141768569 141770688 + Ap4m1 protein_coding retained_intron MGP_WSBEiJ_T0001827.1 MGP_WSBEiJ_G0001748.1 mouse_genomes_project 5 135644396 135646792 - TEC TEC MGP_WSBEiJ_T0014742.1 MGP_WSBEiJ_G0012872.1 mouse_genomes_project 5 147508644 147509182 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100850.1 MGP_WSBEiJ_G0039308.1 mouse_genomes_project 5 48561740 48717214 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0072414.1 MGP_WSBEiJ_G0029133.1 mouse_genomes_project 5 116761394 116786598 - MGP_WSBEiJ_P0072414 Hnf1a protein_coding protein_coding MGP_WSBEiJ_T0072415.1 MGP_WSBEiJ_G0029133.1 mouse_genomes_project 5 116762475 116786375 - MGP_WSBEiJ_P0072415 Hnf1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072416.1 MGP_WSBEiJ_G0029133.1 mouse_genomes_project 5 116764995 116786375 - MGP_WSBEiJ_P0072416 Hnf1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072417.1 MGP_WSBEiJ_G0029133.1 mouse_genomes_project 5 116784233 116786625 - Hnf1a protein_coding retained_intron MGP_WSBEiJ_T0001425.1 MGP_WSBEiJ_G0001353.1 mouse_genomes_project 5 13250135 13252787 + TEC TEC MGP_WSBEiJ_T0073726.1 MGP_WSBEiJ_G0029363.1 mouse_genomes_project 5 139028044 139037552 + MGP_WSBEiJ_P0073726 Rhbdd2 protein_coding protein_coding MGP_WSBEiJ_T0073727.1 MGP_WSBEiJ_G0029363.1 mouse_genomes_project 5 139028130 139038590 + Rhbdd2 protein_coding processed_transcript MGP_WSBEiJ_T0073728.1 MGP_WSBEiJ_G0029363.1 mouse_genomes_project 5 139028142 139031053 + Rhbdd2 protein_coding retained_intron MGP_WSBEiJ_T0073729.1 MGP_WSBEiJ_G0029363.1 mouse_genomes_project 5 139028149 139031983 + Rhbdd2 protein_coding retained_intron MGP_WSBEiJ_T0073730.1 MGP_WSBEiJ_G0029363.1 mouse_genomes_project 5 139030539 139041260 + MGP_WSBEiJ_P0073730 Rhbdd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073714.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138796373 138941319 - MGP_WSBEiJ_P0073714 Hip1 protein_coding protein_coding MGP_WSBEiJ_T0073715.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138796374 138881802 - MGP_WSBEiJ_P0073715 Hip1 protein_coding protein_coding MGP_WSBEiJ_T0073716.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138821318 138822498 - Hip1 protein_coding retained_intron MGP_WSBEiJ_T0073717.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138822624 138833569 - MGP_WSBEiJ_P0073717 Hip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073718.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138826836 138941324 - Hip1 protein_coding retained_intron MGP_WSBEiJ_T0073719.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138831704 138845780 - Hip1 protein_coding processed_transcript MGP_WSBEiJ_T0073720.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138843010 138881962 - MGP_WSBEiJ_P0073720 Hip1 protein_coding protein_coding MGP_WSBEiJ_T0073721.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138845663 138851468 - Hip1 protein_coding retained_intron MGP_WSBEiJ_T0073722.1 MGP_WSBEiJ_G0029360.1 mouse_genomes_project 5 138852343 138941319 - Hip1 protein_coding retained_intron MGP_WSBEiJ_T0071771.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106722234 106837623 + MGP_WSBEiJ_P0071771 Lrrc8d protein_coding protein_coding MGP_WSBEiJ_T0071772.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106723054 106837618 + MGP_WSBEiJ_P0071772 Lrrc8d protein_coding protein_coding MGP_WSBEiJ_T0071773.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106723075 106751155 + Lrrc8d protein_coding retained_intron MGP_WSBEiJ_T0071774.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106723131 106751153 + Lrrc8d protein_coding processed_transcript MGP_WSBEiJ_T0071775.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106748303 106834245 + MGP_WSBEiJ_P0071775 Lrrc8d protein_coding protein_coding MGP_WSBEiJ_T0071776.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106748698 106834256 + MGP_WSBEiJ_P0071776 Lrrc8d protein_coding protein_coding MGP_WSBEiJ_T0071777.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106748904 106836047 + Lrrc8d protein_coding processed_transcript MGP_WSBEiJ_T0071778.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106748977 106834412 + MGP_WSBEiJ_P0071778 Lrrc8d protein_coding protein_coding MGP_WSBEiJ_T0071779.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106749144 106857196 + Lrrc8d protein_coding processed_transcript MGP_WSBEiJ_T0071780.1 MGP_WSBEiJ_G0029012.1 mouse_genomes_project 5 106849330 106857195 + Lrrc8d protein_coding processed_transcript MGP_WSBEiJ_T0074351.1 MGP_WSBEiJ_G0029482.1 mouse_genomes_project 5 144601392 144605609 + Amz1 protein_coding processed_transcript MGP_WSBEiJ_T0074352.1 MGP_WSBEiJ_G0029482.1 mouse_genomes_project 5 144601392 144641876 + MGP_WSBEiJ_P0074352 Amz1 protein_coding protein_coding MGP_WSBEiJ_T0074353.1 MGP_WSBEiJ_G0029482.1 mouse_genomes_project 5 144601403 144602063 + Amz1 protein_coding processed_transcript MGP_WSBEiJ_T0074354.1 MGP_WSBEiJ_G0029482.1 mouse_genomes_project 5 144614263 144643271 + MGP_WSBEiJ_P0074354 Amz1 protein_coding protein_coding MGP_WSBEiJ_T0074355.1 MGP_WSBEiJ_G0029482.1 mouse_genomes_project 5 144614304 144620834 + Amz1 protein_coding processed_transcript MGP_WSBEiJ_T0074356.1 MGP_WSBEiJ_G0029482.1 mouse_genomes_project 5 144628273 144634814 + Amz1 protein_coding retained_intron MGP_WSBEiJ_T0074357.1 MGP_WSBEiJ_G0029482.1 mouse_genomes_project 5 144638023 144650018 + MGP_WSBEiJ_P0074357 Amz1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071459.1 MGP_WSBEiJ_G0028939.1 mouse_genomes_project 5 92823990 92845325 - MGP_WSBEiJ_P0071459 Nup54 protein_coding protein_coding MGP_WSBEiJ_T0071460.1 MGP_WSBEiJ_G0028939.1 mouse_genomes_project 5 92824659 92826398 - Nup54 protein_coding retained_intron MGP_WSBEiJ_T0071461.1 MGP_WSBEiJ_G0028939.1 mouse_genomes_project 5 92831406 92833431 - Nup54 protein_coding retained_intron MGP_WSBEiJ_T0071462.1 MGP_WSBEiJ_G0028939.1 mouse_genomes_project 5 92834249 92844653 - Nup54 protein_coding processed_transcript MGP_WSBEiJ_T0071463.1 MGP_WSBEiJ_G0028939.1 mouse_genomes_project 5 92836577 92845197 - Nup54 protein_coding retained_intron MGP_WSBEiJ_T0071464.1 MGP_WSBEiJ_G0028939.1 mouse_genomes_project 5 92836848 92845220 - MGP_WSBEiJ_P0071464 Nup54 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071465.1 MGP_WSBEiJ_G0028939.1 mouse_genomes_project 5 92841005 92845229 - MGP_WSBEiJ_P0071465 Nup54 protein_coding protein_coding MGP_WSBEiJ_T0071466.1 MGP_WSBEiJ_G0028939.1 mouse_genomes_project 5 92841013 92844863 - MGP_WSBEiJ_P0071466 Nup54 protein_coding protein_coding MGP_WSBEiJ_T0098382.1 MGP_WSBEiJ_G0037045.1 mouse_genomes_project 5 120223497 120223604 - Gm26411 snRNA snRNA MGP_WSBEiJ_T0008175.1 MGP_WSBEiJ_G0006654.1 mouse_genomes_project 5 114763378 114774960 + Gm43095 lincRNA lincRNA MGP_WSBEiJ_T0008071.1 MGP_WSBEiJ_G0006585.1 mouse_genomes_project 5 92106721 92107780 - 1700063O14Rik lincRNA lincRNA MGP_WSBEiJ_T0014634.1 MGP_WSBEiJ_G0012764.1 mouse_genomes_project 5 96707305 96707716 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014592.1 MGP_WSBEiJ_G0012722.1 mouse_genomes_project 5 74700257 74700585 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008010.1 MGP_WSBEiJ_G0006537.1 mouse_genomes_project 5 58810017 58833423 - 4933402J10Rik lincRNA lincRNA MGP_WSBEiJ_T0008011.1 MGP_WSBEiJ_G0006537.1 mouse_genomes_project 5 58810022 58833417 - 4933402J10Rik lincRNA lincRNA MGP_WSBEiJ_T0071522.1 MGP_WSBEiJ_G0028952.1 mouse_genomes_project 5 96745675 96803622 + MGP_WSBEiJ_P0071522 Mrpl1 protein_coding protein_coding MGP_WSBEiJ_T0071523.1 MGP_WSBEiJ_G0028952.1 mouse_genomes_project 5 96746297 96803604 + MGP_WSBEiJ_P0071523 Mrpl1 protein_coding protein_coding MGP_WSBEiJ_T0071524.1 MGP_WSBEiJ_G0028952.1 mouse_genomes_project 5 96746326 96776616 + MGP_WSBEiJ_P0071524 Mrpl1 protein_coding protein_coding MGP_WSBEiJ_T0008015.1 MGP_WSBEiJ_G0006541.1 mouse_genomes_project 5 63424004 63427947 + Gm43837 lincRNA lincRNA MGP_WSBEiJ_T0100862.1 MGP_WSBEiJ_G0039320.1 mouse_genomes_project 5 96377699 96380190 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001722.1 MGP_WSBEiJ_G0001644.1 mouse_genomes_project 5 114711717 114712281 + TEC TEC MGP_WSBEiJ_T0069760.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29497734 29532108 + MGP_WSBEiJ_P0069760 Bre protein_coding protein_coding MGP_WSBEiJ_T0069761.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29497943 29898035 + MGP_WSBEiJ_P0069761 Bre protein_coding protein_coding MGP_WSBEiJ_T0069762.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29497954 29532528 + Bre protein_coding retained_intron MGP_WSBEiJ_T0069763.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29497980 29508523 + Bre protein_coding processed_transcript MGP_WSBEiJ_T0069764.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29497990 29818176 + Bre protein_coding retained_intron MGP_WSBEiJ_T0069765.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29497998 29640443 + Bre protein_coding retained_intron MGP_WSBEiJ_T0069766.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29498014 29897928 + MGP_WSBEiJ_P0069766 Bre protein_coding protein_coding MGP_WSBEiJ_T0069767.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29498034 29897820 + MGP_WSBEiJ_P0069767 Bre protein_coding protein_coding MGP_WSBEiJ_T0069768.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29498034 29897820 + MGP_WSBEiJ_P0069768 Bre protein_coding protein_coding MGP_WSBEiJ_T0069769.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29498034 29897820 + MGP_WSBEiJ_P0069769 Bre protein_coding protein_coding MGP_WSBEiJ_T0069770.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29498035 29629894 + MGP_WSBEiJ_P0069770 Bre protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069771.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29501809 29870854 + MGP_WSBEiJ_P0069771 Bre protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069772.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29592179 29629975 + Bre protein_coding processed_transcript MGP_WSBEiJ_T0069773.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29859269 29897834 + Bre protein_coding processed_transcript MGP_WSBEiJ_T0069774.1 MGP_WSBEiJ_G0028621.1 mouse_genomes_project 5 29892808 29897827 + Bre protein_coding processed_transcript MGP_WSBEiJ_T0073760.1 MGP_WSBEiJ_G0029368.1 mouse_genomes_project 5 139226230 139271207 + Srrm3 protein_coding retained_intron MGP_WSBEiJ_T0073761.1 MGP_WSBEiJ_G0029368.1 mouse_genomes_project 5 139226237 139281462 + MGP_WSBEiJ_P0073761 Srrm3 protein_coding protein_coding MGP_WSBEiJ_T0073762.1 MGP_WSBEiJ_G0029368.1 mouse_genomes_project 5 139239337 139302282 + MGP_WSBEiJ_P0073762 Srrm3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073763.1 MGP_WSBEiJ_G0029368.1 mouse_genomes_project 5 139239337 139303945 + MGP_WSBEiJ_P0073763 Srrm3 protein_coding protein_coding MGP_WSBEiJ_T0073764.1 MGP_WSBEiJ_G0029368.1 mouse_genomes_project 5 139283644 139286756 + Srrm3 protein_coding retained_intron MGP_WSBEiJ_T0073765.1 MGP_WSBEiJ_G0029368.1 mouse_genomes_project 5 139295801 139297394 + Srrm3 protein_coding retained_intron MGP_WSBEiJ_T0008148.1 MGP_WSBEiJ_G0006640.1 mouse_genomes_project 5 113083327 113089835 + C130026L21Rik lincRNA lincRNA MGP_WSBEiJ_T0008149.1 MGP_WSBEiJ_G0006640.1 mouse_genomes_project 5 113083466 113089043 + C130026L21Rik lincRNA lincRNA MGP_WSBEiJ_T0008150.1 MGP_WSBEiJ_G0006640.1 mouse_genomes_project 5 113083473 113084782 + C130026L21Rik lincRNA lincRNA MGP_WSBEiJ_T0008151.1 MGP_WSBEiJ_G0006640.1 mouse_genomes_project 5 113084336 113110088 + C130026L21Rik lincRNA lincRNA MGP_WSBEiJ_T0008000.1 MGP_WSBEiJ_G0006527.1 mouse_genomes_project 5 48875526 49022515 + Gm43016 lincRNA lincRNA MGP_WSBEiJ_T0008067.1 MGP_WSBEiJ_G0006581.1 mouse_genomes_project 5 91150204 91153828 + Gm43086 lincRNA lincRNA MGP_WSBEiJ_T0074105.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141754399 141764430 - MGP_WSBEiJ_P0074105 protein_coding protein_coding MGP_WSBEiJ_T0074106.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141754416 141756669 - protein_coding retained_intron MGP_WSBEiJ_T0074107.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141754416 141763826 - MGP_WSBEiJ_P0074107 protein_coding protein_coding MGP_WSBEiJ_T0074108.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141759320 141762389 - protein_coding retained_intron MGP_WSBEiJ_T0074109.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141759716 141763274 - MGP_WSBEiJ_P0074109 protein_coding protein_coding MGP_WSBEiJ_T0074110.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141759969 141761651 - protein_coding retained_intron MGP_WSBEiJ_T0074111.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141760138 141763025 - MGP_WSBEiJ_P0074111 protein_coding protein_coding MGP_WSBEiJ_T0074112.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141760139 141763823 - MGP_WSBEiJ_P0074112 protein_coding protein_coding MGP_WSBEiJ_T0074113.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141760469 141762669 - MGP_WSBEiJ_P0074113 protein_coding protein_coding MGP_WSBEiJ_T0074114.1 MGP_WSBEiJ_G0029433.1 mouse_genomes_project 5 141760671 141763249 - MGP_WSBEiJ_P0074114 protein_coding protein_coding MGP_WSBEiJ_T0074632.1 MGP_WSBEiJ_G0029543.1 mouse_genomes_project 5 149517128 149563917 + MGP_WSBEiJ_P0074632 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074633.1 MGP_WSBEiJ_G0029543.1 mouse_genomes_project 5 149517136 149564331 + MGP_WSBEiJ_P0074633 protein_coding protein_coding MGP_WSBEiJ_T0073005.1 MGP_WSBEiJ_G0029240.1 mouse_genomes_project 5 125675620 125728964 + Tmem120b protein_coding processed_transcript MGP_WSBEiJ_T0073006.1 MGP_WSBEiJ_G0029240.1 mouse_genomes_project 5 125685536 125730031 + MGP_WSBEiJ_P0073006 Tmem120b protein_coding protein_coding MGP_WSBEiJ_T0073007.1 MGP_WSBEiJ_G0029240.1 mouse_genomes_project 5 125685586 125727416 + MGP_WSBEiJ_P0073007 Tmem120b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073008.1 MGP_WSBEiJ_G0029240.1 mouse_genomes_project 5 125685587 125729291 + MGP_WSBEiJ_P0073008 Tmem120b protein_coding protein_coding MGP_WSBEiJ_T0073009.1 MGP_WSBEiJ_G0029240.1 mouse_genomes_project 5 125685602 125727434 + MGP_WSBEiJ_P0073009 Tmem120b protein_coding protein_coding MGP_WSBEiJ_T0073010.1 MGP_WSBEiJ_G0029240.1 mouse_genomes_project 5 125685612 125716617 + Tmem120b protein_coding retained_intron MGP_WSBEiJ_T0073011.1 MGP_WSBEiJ_G0029240.1 mouse_genomes_project 5 125685631 125712394 + Tmem120b protein_coding retained_intron MGP_WSBEiJ_T0073012.1 MGP_WSBEiJ_G0029240.1 mouse_genomes_project 5 125711926 125728102 + Tmem120b protein_coding retained_intron MGP_WSBEiJ_T0073927.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140835860 140847825 - MGP_WSBEiJ_P0073927 Srrt protein_coding protein_coding MGP_WSBEiJ_T0073928.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140835867 140847817 - MGP_WSBEiJ_P0073928 Srrt protein_coding protein_coding MGP_WSBEiJ_T0073929.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140835871 140847817 - MGP_WSBEiJ_P0073929 Srrt protein_coding protein_coding MGP_WSBEiJ_T0073930.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140835873 140847578 - MGP_WSBEiJ_P0073930 Srrt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073931.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140835881 140839802 - MGP_WSBEiJ_P0073931 Srrt protein_coding protein_coding MGP_WSBEiJ_T0073932.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140836143 140837582 - MGP_WSBEiJ_P0073932 Srrt protein_coding protein_coding MGP_WSBEiJ_T0073933.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140836174 140837091 - Srrt protein_coding retained_intron MGP_WSBEiJ_T0073934.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140836392 140837374 - Srrt protein_coding retained_intron MGP_WSBEiJ_T0073935.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140836435 140837010 - Srrt protein_coding retained_intron MGP_WSBEiJ_T0073936.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140836623 140837724 - Srrt protein_coding retained_intron MGP_WSBEiJ_T0073937.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140837780 140838704 - Srrt protein_coding retained_intron MGP_WSBEiJ_T0073938.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140837988 140840166 - MGP_WSBEiJ_P0073938 Srrt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073939.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140837988 140840475 - MGP_WSBEiJ_P0073939 Srrt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073940.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140838415 140840043 - Srrt protein_coding retained_intron MGP_WSBEiJ_T0073941.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140839742 140847630 - Srrt protein_coding retained_intron MGP_WSBEiJ_T0073942.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140840029 140840888 - Srrt protein_coding retained_intron MGP_WSBEiJ_T0073943.1 MGP_WSBEiJ_G0029399.1 mouse_genomes_project 5 140842809 140847791 - MGP_WSBEiJ_P0073943 Srrt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008107.1 MGP_WSBEiJ_G0006613.1 mouse_genomes_project 5 104065586 104136437 - 4930429D17Rik lincRNA lincRNA MGP_WSBEiJ_T0004652.1 MGP_WSBEiJ_G0004024.1 mouse_genomes_project 5 90816137 90832975 - Gm43449 antisense antisense MGP_WSBEiJ_T0001515.1 MGP_WSBEiJ_G0001440.1 mouse_genomes_project 5 46533999 46537555 + TEC TEC MGP_WSBEiJ_T0098396.1 MGP_WSBEiJ_G0037059.1 mouse_genomes_project 5 155174394 155174535 - Gm25284 snRNA snRNA MGP_WSBEiJ_T0001520.1 MGP_WSBEiJ_G0001445.1 mouse_genomes_project 5 47128502 47130749 - TEC TEC MGP_WSBEiJ_T0001756.1 MGP_WSBEiJ_G0001678.1 mouse_genomes_project 5 123008573 123009846 + TEC TEC MGP_WSBEiJ_T0073640.1 MGP_WSBEiJ_G0029345.1 mouse_genomes_project 5 138343805 138345064 + MGP_WSBEiJ_P0073640 Cldn3 protein_coding protein_coding MGP_WSBEiJ_T0073497.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134569065 134669011 - MGP_WSBEiJ_P0073497 Auts2 protein_coding protein_coding MGP_WSBEiJ_T0073498.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134569074 135701054 - Auts2 protein_coding processed_transcript MGP_WSBEiJ_T0073499.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134569514 135700372 - Auts2 protein_coding processed_transcript MGP_WSBEiJ_T0073500.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134570781 135207284 - Auts2 protein_coding processed_transcript MGP_WSBEiJ_T0073501.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134571014 134612605 - MGP_WSBEiJ_P0073501 Auts2 protein_coding protein_coding MGP_WSBEiJ_T0073502.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134571116 135699553 - Auts2 protein_coding processed_transcript MGP_WSBEiJ_T0073503.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134572029 134595417 - MGP_WSBEiJ_P0073503 Auts2 protein_coding protein_coding MGP_WSBEiJ_T0073504.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134577140 134587265 - Auts2 protein_coding processed_transcript MGP_WSBEiJ_T0073505.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134604960 134606738 - Auts2 protein_coding retained_intron MGP_WSBEiJ_T0073506.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134610907 134671331 - Auts2 protein_coding retained_intron MGP_WSBEiJ_T0073507.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134612322 134667762 - Auts2 protein_coding processed_transcript MGP_WSBEiJ_T0073508.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134667676 134671366 - Auts2 protein_coding retained_intron MGP_WSBEiJ_T0073509.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 134909520 135700119 - Auts2 protein_coding retained_intron MGP_WSBEiJ_T0073510.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 135179957 135183559 - Auts2 protein_coding retained_intron MGP_WSBEiJ_T0073511.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 135180923 135699744 - Auts2 protein_coding processed_transcript MGP_WSBEiJ_T0073512.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 135185836 135207356 - MGP_WSBEiJ_P0073512 Auts2 protein_coding protein_coding MGP_WSBEiJ_T0073513.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 135185917 135602109 - MGP_WSBEiJ_P0073513 Auts2 protein_coding protein_coding MGP_WSBEiJ_T0073514.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 135206676 135700512 - Auts2 protein_coding retained_intron MGP_WSBEiJ_T0073515.1 MGP_WSBEiJ_G0029327.1 mouse_genomes_project 5 135699196 135699505 - MGP_WSBEiJ_P0073515 Auts2 protein_coding protein_coding MGP_WSBEiJ_T0014535.1 MGP_WSBEiJ_G0012665.1 mouse_genomes_project 5 49391590 49392071 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004739.1 MGP_WSBEiJ_G0004082.1 mouse_genomes_project 5 124332010 124332644 + 1700008B11Rik antisense antisense MGP_WSBEiJ_T0001719.1 MGP_WSBEiJ_G0001641.1 mouse_genomes_project 5 113932427 113933688 + TEC TEC MGP_WSBEiJ_T0070676.1 MGP_WSBEiJ_G0028772.1 mouse_genomes_project 5 65000767 65037732 + MGP_WSBEiJ_P0070676 Rhoh protein_coding protein_coding MGP_WSBEiJ_T0070677.1 MGP_WSBEiJ_G0028772.1 mouse_genomes_project 5 65003039 65034475 + MGP_WSBEiJ_P0070677 Rhoh protein_coding protein_coding MGP_WSBEiJ_T0070678.1 MGP_WSBEiJ_G0028772.1 mouse_genomes_project 5 65003612 65007968 + Rhoh protein_coding processed_transcript MGP_WSBEiJ_T0070679.1 MGP_WSBEiJ_G0028772.1 mouse_genomes_project 5 65003650 65008428 + Rhoh protein_coding retained_intron MGP_WSBEiJ_T0069705.1 MGP_WSBEiJ_G0028613.1 mouse_genomes_project 5 29059578 29091117 + MGP_WSBEiJ_P0069705 Gckr protein_coding protein_coding MGP_WSBEiJ_T0069706.1 MGP_WSBEiJ_G0028613.1 mouse_genomes_project 5 29059689 29091098 + Gckr protein_coding retained_intron MGP_WSBEiJ_T0069707.1 MGP_WSBEiJ_G0028613.1 mouse_genomes_project 5 29059716 29091105 + MGP_WSBEiJ_P0069707 Gckr protein_coding protein_coding MGP_WSBEiJ_T0069708.1 MGP_WSBEiJ_G0028613.1 mouse_genomes_project 5 29059747 29062717 + MGP_WSBEiJ_P0069708 Gckr protein_coding protein_coding MGP_WSBEiJ_T0069709.1 MGP_WSBEiJ_G0028613.1 mouse_genomes_project 5 29060837 29070108 + Gckr protein_coding retained_intron MGP_WSBEiJ_T0069710.1 MGP_WSBEiJ_G0028613.1 mouse_genomes_project 5 29061642 29069014 + Gckr protein_coding retained_intron MGP_WSBEiJ_T0069711.1 MGP_WSBEiJ_G0028613.1 mouse_genomes_project 5 29090033 29091100 + Gckr protein_coding retained_intron MGP_WSBEiJ_T0070284.1 MGP_WSBEiJ_G0028703.1 mouse_genomes_project 5 36770080 36789178 - MGP_WSBEiJ_P0070284 Zfp518b protein_coding protein_coding MGP_WSBEiJ_T0070285.1 MGP_WSBEiJ_G0028703.1 mouse_genomes_project 5 36770082 36789102 - MGP_WSBEiJ_P0070285 Zfp518b protein_coding protein_coding MGP_WSBEiJ_T0070286.1 MGP_WSBEiJ_G0028703.1 mouse_genomes_project 5 36775768 36789178 - MGP_WSBEiJ_P0070286 Zfp518b protein_coding protein_coding MGP_WSBEiJ_T0070287.1 MGP_WSBEiJ_G0028703.1 mouse_genomes_project 5 36776219 36789109 - MGP_WSBEiJ_P0070287 Zfp518b protein_coding protein_coding MGP_WSBEiJ_T0071749.1 MGP_WSBEiJ_G0029002.1 mouse_genomes_project 5 105339217 105346031 + MGP_WSBEiJ_P0071749 Spp1 protein_coding protein_coding MGP_WSBEiJ_T0071750.1 MGP_WSBEiJ_G0029002.1 mouse_genomes_project 5 105339217 105346029 + MGP_WSBEiJ_P0071750 Spp1 protein_coding protein_coding MGP_WSBEiJ_T0071751.1 MGP_WSBEiJ_G0029002.1 mouse_genomes_project 5 105339220 105346028 + MGP_WSBEiJ_P0071751 Spp1 protein_coding protein_coding MGP_WSBEiJ_T0071752.1 MGP_WSBEiJ_G0029002.1 mouse_genomes_project 5 105339238 105344516 + MGP_WSBEiJ_P0071752 Spp1 protein_coding protein_coding MGP_WSBEiJ_T0071753.1 MGP_WSBEiJ_G0029002.1 mouse_genomes_project 5 105339241 105344478 + MGP_WSBEiJ_P0071753 Spp1 protein_coding protein_coding MGP_WSBEiJ_T0071754.1 MGP_WSBEiJ_G0029002.1 mouse_genomes_project 5 105339257 105341821 + MGP_WSBEiJ_P0071754 Spp1 protein_coding protein_coding MGP_WSBEiJ_T0071755.1 MGP_WSBEiJ_G0029002.1 mouse_genomes_project 5 105340303 105346024 + MGP_WSBEiJ_P0071755 Spp1 protein_coding protein_coding MGP_WSBEiJ_T0007937.1 MGP_WSBEiJ_G0006485.1 mouse_genomes_project 5 23100081 23102556 + 4831440E17Rik lincRNA lincRNA MGP_WSBEiJ_T0071512.1 MGP_WSBEiJ_G0028950.1 mouse_genomes_project 5 96497570 96501689 + MGP_WSBEiJ_P0071512 Cxcl13 protein_coding protein_coding MGP_WSBEiJ_T0069047.1 MGP_WSBEiJ_G0028493.1 mouse_genomes_project 5 14759057 14917697 + MGP_WSBEiJ_P0069047 Sema3c protein_coding protein_coding MGP_WSBEiJ_T0069048.1 MGP_WSBEiJ_G0028493.1 mouse_genomes_project 5 14759425 14868435 + MGP_WSBEiJ_P0069048 Sema3c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069049.1 MGP_WSBEiJ_G0028493.1 mouse_genomes_project 5 14759542 14762953 + Sema3c protein_coding retained_intron MGP_WSBEiJ_T0069050.1 MGP_WSBEiJ_G0028493.1 mouse_genomes_project 5 14759675 14860815 + MGP_WSBEiJ_P0069050 Sema3c protein_coding protein_coding MGP_WSBEiJ_T0069051.1 MGP_WSBEiJ_G0028493.1 mouse_genomes_project 5 14880100 14917694 + Sema3c protein_coding retained_intron MGP_WSBEiJ_T0001714.1 MGP_WSBEiJ_G0001636.1 mouse_genomes_project 5 112513346 112514080 + TEC TEC MGP_WSBEiJ_T0010546.1 MGP_WSBEiJ_G0008703.1 mouse_genomes_project 5 128252070 128252147 + Gm27551 miRNA miRNA MGP_WSBEiJ_T0070467.1 MGP_WSBEiJ_G0028734.1 mouse_genomes_project 5 50766278 50870548 - MGP_WSBEiJ_P0070467 Ccdc149 protein_coding unknown_likely_coding MGP_WSBEiJ_T0070468.1 MGP_WSBEiJ_G0028734.1 mouse_genomes_project 5 50766284 50870633 - MGP_WSBEiJ_P0070468 Ccdc149 protein_coding protein_coding MGP_WSBEiJ_T0070469.1 MGP_WSBEiJ_G0028734.1 mouse_genomes_project 5 50766284 50870671 - MGP_WSBEiJ_P0070469 Ccdc149 protein_coding protein_coding MGP_WSBEiJ_T0072157.1 MGP_WSBEiJ_G0029084.1 mouse_genomes_project 5 113888465 113900133 + MGP_WSBEiJ_P0072157 Tfip11 protein_coding protein_coding MGP_WSBEiJ_T0072158.1 MGP_WSBEiJ_G0029084.1 mouse_genomes_project 5 113888528 113894019 + MGP_WSBEiJ_P0072158 Tfip11 protein_coding protein_coding MGP_WSBEiJ_T0072159.1 MGP_WSBEiJ_G0029084.1 mouse_genomes_project 5 113888599 113890290 + MGP_WSBEiJ_P0072159 Tfip11 protein_coding protein_coding MGP_WSBEiJ_T0072160.1 MGP_WSBEiJ_G0029084.1 mouse_genomes_project 5 113897702 113899333 + Tfip11 protein_coding retained_intron MGP_WSBEiJ_T0004647.1 MGP_WSBEiJ_G0004020.1 mouse_genomes_project 5 87956832 87960367 - Gm42794 antisense antisense MGP_WSBEiJ_T0071712.1 MGP_WSBEiJ_G0028990.1 mouse_genomes_project 5 104502331 104512483 - MGP_WSBEiJ_P0071712 1700016H13Rik protein_coding protein_coding MGP_WSBEiJ_T0071713.1 MGP_WSBEiJ_G0028990.1 mouse_genomes_project 5 104502718 104512205 - MGP_WSBEiJ_P0071713 1700016H13Rik protein_coding protein_coding MGP_WSBEiJ_T0071714.1 MGP_WSBEiJ_G0028990.1 mouse_genomes_project 5 104502876 104512196 - MGP_WSBEiJ_P0071714 1700016H13Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071715.1 MGP_WSBEiJ_G0028990.1 mouse_genomes_project 5 104502882 104512221 - MGP_WSBEiJ_P0071715 1700016H13Rik protein_coding protein_coding MGP_WSBEiJ_T0071716.1 MGP_WSBEiJ_G0028990.1 mouse_genomes_project 5 104502986 104512196 - MGP_WSBEiJ_P0071716 1700016H13Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071717.1 MGP_WSBEiJ_G0028990.1 mouse_genomes_project 5 104503059 104512196 - MGP_WSBEiJ_P0071717 1700016H13Rik protein_coding protein_coding MGP_WSBEiJ_T0071718.1 MGP_WSBEiJ_G0028990.1 mouse_genomes_project 5 104503059 104512197 - MGP_WSBEiJ_P0071718 1700016H13Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001649.1 MGP_WSBEiJ_G0001571.1 mouse_genomes_project 5 73456040 73461255 - TEC TEC MGP_WSBEiJ_T0001736.1 MGP_WSBEiJ_G0001658.1 mouse_genomes_project 5 117791157 117793435 + TEC TEC MGP_WSBEiJ_T0072227.1 MGP_WSBEiJ_G0029098.1 mouse_genomes_project 5 115154569 115157363 + Wscd2 protein_coding retained_intron MGP_WSBEiJ_T0072228.1 MGP_WSBEiJ_G0029098.1 mouse_genomes_project 5 115154683 115250616 + MGP_WSBEiJ_P0072228 Wscd2 protein_coding protein_coding MGP_WSBEiJ_T0072229.1 MGP_WSBEiJ_G0029098.1 mouse_genomes_project 5 115154988 115212933 + Wscd2 protein_coding retained_intron MGP_WSBEiJ_T0072230.1 MGP_WSBEiJ_G0029098.1 mouse_genomes_project 5 115208302 115214827 + Wscd2 protein_coding retained_intron MGP_WSBEiJ_T0072231.1 MGP_WSBEiJ_G0029098.1 mouse_genomes_project 5 115230499 115250609 + Wscd2 protein_coding processed_transcript MGP_WSBEiJ_T0072232.1 MGP_WSBEiJ_G0029098.1 mouse_genomes_project 5 115238828 115241935 + Wscd2 protein_coding processed_transcript MGP_WSBEiJ_T0069073.1 MGP_WSBEiJ_G0028498.1 mouse_genomes_project 5 18076009 18197030 - MGP_WSBEiJ_P0069073 Phtf2 protein_coding protein_coding MGP_WSBEiJ_T0069074.1 MGP_WSBEiJ_G0028498.1 mouse_genomes_project 5 18077009 18091514 - MGP_WSBEiJ_P0069074 Phtf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069075.1 MGP_WSBEiJ_G0028498.1 mouse_genomes_project 5 18099725 18170143 - Phtf2 protein_coding processed_transcript MGP_WSBEiJ_T0069076.1 MGP_WSBEiJ_G0028498.1 mouse_genomes_project 5 18099728 18122861 - MGP_WSBEiJ_P0069076 Phtf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069077.1 MGP_WSBEiJ_G0028498.1 mouse_genomes_project 5 18105906 18196983 - Phtf2 protein_coding retained_intron MGP_WSBEiJ_T0069078.1 MGP_WSBEiJ_G0028498.1 mouse_genomes_project 5 18110461 18196984 - Phtf2 protein_coding retained_intron MGP_WSBEiJ_T0069079.1 MGP_WSBEiJ_G0028498.1 mouse_genomes_project 5 18122837 18196951 - MGP_WSBEiJ_P0069079 Phtf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008054.1 MGP_WSBEiJ_G0006571.1 mouse_genomes_project 5 77039077 77082782 + Gm34728 lincRNA lincRNA MGP_WSBEiJ_T0014740.1 MGP_WSBEiJ_G0012870.1 mouse_genomes_project 5 147091743 147091963 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014632.1 MGP_WSBEiJ_G0012762.1 mouse_genomes_project 5 93631300 93631682 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001730.1 MGP_WSBEiJ_G0001652.1 mouse_genomes_project 5 115832770 115834642 + TEC TEC MGP_WSBEiJ_T0004623.1 MGP_WSBEiJ_G0004000.1 mouse_genomes_project 5 65818100 65873681 - Uchl1os antisense antisense MGP_WSBEiJ_T0004624.1 MGP_WSBEiJ_G0004000.1 mouse_genomes_project 5 65851401 65873216 - Uchl1os antisense antisense MGP_WSBEiJ_T0008315.1 MGP_WSBEiJ_G0006752.1 mouse_genomes_project 5 153270564 153276577 + 4930505K14Rik lincRNA lincRNA MGP_WSBEiJ_T0074693.1 MGP_WSBEiJ_G0029562.1 mouse_genomes_project 5 151679183 151685650 - MGP_WSBEiJ_P0074693 Cdx2 protein_coding protein_coding MGP_WSBEiJ_T0001760.1 MGP_WSBEiJ_G0001682.1 mouse_genomes_project 5 123894558 123897408 + TEC TEC MGP_WSBEiJ_T0070924.1 MGP_WSBEiJ_G0028813.1 mouse_genomes_project 5 72783226 72841766 + MGP_WSBEiJ_P0070924 Cwh43 protein_coding protein_coding MGP_WSBEiJ_T0070925.1 MGP_WSBEiJ_G0028813.1 mouse_genomes_project 5 72783378 72841776 + MGP_WSBEiJ_P0070925 Cwh43 protein_coding protein_coding MGP_WSBEiJ_T0070926.1 MGP_WSBEiJ_G0028813.1 mouse_genomes_project 5 72783513 72841623 + MGP_WSBEiJ_P0070926 Cwh43 protein_coding unknown_likely_coding MGP_WSBEiJ_T0070927.1 MGP_WSBEiJ_G0028813.1 mouse_genomes_project 5 72811679 72815818 + Cwh43 protein_coding retained_intron MGP_WSBEiJ_T0004776.1 MGP_WSBEiJ_G0004109.1 mouse_genomes_project 5 138373209 138374348 - Abhd11os antisense antisense MGP_WSBEiJ_T0004777.1 MGP_WSBEiJ_G0004109.1 mouse_genomes_project 5 138373217 138374249 - Abhd11os antisense antisense MGP_WSBEiJ_T0072440.1 MGP_WSBEiJ_G0029140.1 mouse_genomes_project 5 117094699 117099851 + MGP_WSBEiJ_P0072440 Pop5 protein_coding protein_coding MGP_WSBEiJ_T0072441.1 MGP_WSBEiJ_G0029140.1 mouse_genomes_project 5 117096835 117099102 + Pop5 protein_coding processed_transcript MGP_WSBEiJ_T0072442.1 MGP_WSBEiJ_G0029140.1 mouse_genomes_project 5 117096888 117104225 + MGP_WSBEiJ_P0072442 Pop5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072443.1 MGP_WSBEiJ_G0029140.1 mouse_genomes_project 5 117096891 117099804 + Pop5 protein_coding processed_transcript MGP_WSBEiJ_T0072444.1 MGP_WSBEiJ_G0029140.1 mouse_genomes_project 5 117096903 117099527 + Pop5 protein_coding retained_intron MGP_WSBEiJ_T0072445.1 MGP_WSBEiJ_G0029140.1 mouse_genomes_project 5 117099200 117099826 + Pop5 protein_coding processed_transcript MGP_WSBEiJ_T0014499.1 MGP_WSBEiJ_G0012629.1 mouse_genomes_project 5 30662083 30697889 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001844.1 MGP_WSBEiJ_G0001764.1 mouse_genomes_project 5 140012967 140019864 - TEC TEC MGP_WSBEiJ_T0100106.1 MGP_WSBEiJ_G0038710.1 mouse_genomes_project 5 71952327 71954285 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0072356.1 MGP_WSBEiJ_G0029123.1 mouse_genomes_project 5 116492752 116507256 + MGP_WSBEiJ_P0072356 Tchp protein_coding protein_coding MGP_WSBEiJ_T0072357.1 MGP_WSBEiJ_G0029123.1 mouse_genomes_project 5 116492801 116494424 + Tchp protein_coding processed_transcript MGP_WSBEiJ_T0072358.1 MGP_WSBEiJ_G0029123.1 mouse_genomes_project 5 116492846 116507256 + Tchp protein_coding retained_intron MGP_WSBEiJ_T0072359.1 MGP_WSBEiJ_G0029123.1 mouse_genomes_project 5 116496049 116498829 + Tchp protein_coding retained_intron MGP_WSBEiJ_T0072360.1 MGP_WSBEiJ_G0029123.1 mouse_genomes_project 5 116499565 116504618 + MGP_WSBEiJ_P0072360 Tchp protein_coding protein_coding MGP_WSBEiJ_T0072361.1 MGP_WSBEiJ_G0029123.1 mouse_genomes_project 5 116499889 116507256 + Tchp protein_coding processed_transcript MGP_WSBEiJ_T0072362.1 MGP_WSBEiJ_G0029123.1 mouse_genomes_project 5 116502488 116503648 + Tchp protein_coding retained_intron MGP_WSBEiJ_T0072363.1 MGP_WSBEiJ_G0029123.1 mouse_genomes_project 5 116504612 116506087 + Tchp protein_coding retained_intron MGP_WSBEiJ_T0004799.1 MGP_WSBEiJ_G0004125.1 mouse_genomes_project 5 145520239 145538418 - Gm16036 antisense antisense MGP_WSBEiJ_T0071513.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96610418 96621776 - Cnot6l protein_coding retained_intron MGP_WSBEiJ_T0071514.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96610429 96696022 - MGP_WSBEiJ_P0071514 Cnot6l protein_coding protein_coding MGP_WSBEiJ_T0071515.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96610435 96695133 - MGP_WSBEiJ_P0071515 Cnot6l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071516.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96610583 96695133 - MGP_WSBEiJ_P0071516 Cnot6l protein_coding protein_coding MGP_WSBEiJ_T0071517.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96640690 96663727 - Cnot6l protein_coding retained_intron MGP_WSBEiJ_T0071518.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96641379 96695120 - MGP_WSBEiJ_P0071518 Cnot6l protein_coding protein_coding MGP_WSBEiJ_T0071519.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96663727 96695249 - MGP_WSBEiJ_P0071519 Cnot6l protein_coding protein_coding MGP_WSBEiJ_T0071520.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96663763 96697501 - MGP_WSBEiJ_P0071520 Cnot6l protein_coding protein_coding MGP_WSBEiJ_T0071521.1 MGP_WSBEiJ_G0028951.1 mouse_genomes_project 5 96663874 96695141 - MGP_WSBEiJ_P0071521 Cnot6l protein_coding protein_coding MGP_WSBEiJ_T0073137.1 MGP_WSBEiJ_G0029262.1 mouse_genomes_project 5 126676279 126710123 + MGP_WSBEiJ_P0073137 Hip1r protein_coding protein_coding MGP_WSBEiJ_T0073138.1 MGP_WSBEiJ_G0029262.1 mouse_genomes_project 5 126684963 126694655 + MGP_WSBEiJ_P0073138 Hip1r protein_coding protein_coding MGP_WSBEiJ_T0073139.1 MGP_WSBEiJ_G0029262.1 mouse_genomes_project 5 126699473 126701964 + MGP_WSBEiJ_P0073139 Hip1r protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073140.1 MGP_WSBEiJ_G0029262.1 mouse_genomes_project 5 126703974 126705572 + Hip1r protein_coding retained_intron MGP_WSBEiJ_T0073141.1 MGP_WSBEiJ_G0029262.1 mouse_genomes_project 5 126704350 126706227 + MGP_WSBEiJ_P0073141 Hip1r protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073142.1 MGP_WSBEiJ_G0029262.1 mouse_genomes_project 5 126704947 126706253 + Hip1r protein_coding retained_intron MGP_WSBEiJ_T0073143.1 MGP_WSBEiJ_G0029262.1 mouse_genomes_project 5 126705163 126706239 + Hip1r protein_coding retained_intron MGP_WSBEiJ_T0071293.1 MGP_WSBEiJ_G0028899.1 mouse_genomes_project 5 88862835 88881376 - MGP_WSBEiJ_P0071293 Grsf1 protein_coding protein_coding MGP_WSBEiJ_T0071294.1 MGP_WSBEiJ_G0028899.1 mouse_genomes_project 5 88864393 88882050 - MGP_WSBEiJ_P0071294 Grsf1 protein_coding protein_coding MGP_WSBEiJ_T0071295.1 MGP_WSBEiJ_G0028899.1 mouse_genomes_project 5 88867478 88877460 - Grsf1 protein_coding retained_intron MGP_WSBEiJ_T0071296.1 MGP_WSBEiJ_G0028899.1 mouse_genomes_project 5 88879586 88881078 - Grsf1 protein_coding processed_transcript MGP_WSBEiJ_T0001571.1 MGP_WSBEiJ_G0001495.1 mouse_genomes_project 5 56687681 56689556 + TEC TEC MGP_WSBEiJ_T0070132.1 MGP_WSBEiJ_G0028678.1 mouse_genomes_project 5 34524626 34533095 - MGP_WSBEiJ_P0070132 Tada2b protein_coding protein_coding MGP_WSBEiJ_T0074433.1 MGP_WSBEiJ_G0029499.1 mouse_genomes_project 5 147209752 147232778 + MGP_WSBEiJ_P0074433 Spdye4b protein_coding protein_coding MGP_WSBEiJ_T0004632.1 MGP_WSBEiJ_G0004007.1 mouse_genomes_project 5 67169689 67179149 - 4930425K10Rik antisense antisense MGP_WSBEiJ_T0010542.1 MGP_WSBEiJ_G0008699.1 mouse_genomes_project 5 125256103 125256222 + Mir8115 miRNA miRNA MGP_WSBEiJ_T0004575.1 MGP_WSBEiJ_G0003961.1 mouse_genomes_project 5 28264290 28280610 + Gm42765 antisense antisense MGP_WSBEiJ_T0014611.1 MGP_WSBEiJ_G0012741.1 mouse_genomes_project 5 87124278 87124354 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014445.1 MGP_WSBEiJ_G0012575.1 mouse_genomes_project 5 18123243 18123618 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004626.1 MGP_WSBEiJ_G0004002.1 mouse_genomes_project 5 66210613 66212993 - Gm15948 antisense antisense MGP_WSBEiJ_T0001798.1 MGP_WSBEiJ_G0001719.1 mouse_genomes_project 5 132575807 132578023 + TEC TEC MGP_WSBEiJ_T0100874.1 MGP_WSBEiJ_G0039332.1 mouse_genomes_project 5 149939176 149983096 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014659.1 MGP_WSBEiJ_G0012789.1 mouse_genomes_project 5 107978580 107978823 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017558.1 MGP_WSBEiJ_G0015021.1 mouse_genomes_project 5 63759986 63868593 - Gm20033 processed_transcript antisense MGP_WSBEiJ_T0017559.1 MGP_WSBEiJ_G0015021.1 mouse_genomes_project 5 63759990 63760756 - Gm20033 processed_transcript retained_intron MGP_WSBEiJ_T0017560.1 MGP_WSBEiJ_G0015021.1 mouse_genomes_project 5 63760102 63766649 - Gm20033 processed_transcript retained_intron MGP_WSBEiJ_T0017561.1 MGP_WSBEiJ_G0015021.1 mouse_genomes_project 5 63761591 63777566 - Gm20033 processed_transcript processed_transcript MGP_WSBEiJ_T0017562.1 MGP_WSBEiJ_G0015021.1 mouse_genomes_project 5 63866880 63868312 - Gm20033 processed_transcript retained_intron MGP_WSBEiJ_T0017563.1 MGP_WSBEiJ_G0015021.1 mouse_genomes_project 5 63866976 63868592 - Gm20033 processed_transcript antisense MGP_WSBEiJ_T0070169.1 MGP_WSBEiJ_G0028685.1 mouse_genomes_project 5 34910046 35002575 + MGP_WSBEiJ_P0070169 Ppp2r2c protein_coding protein_coding MGP_WSBEiJ_T0070170.1 MGP_WSBEiJ_G0028685.1 mouse_genomes_project 5 34910196 34972721 + MGP_WSBEiJ_P0070170 Ppp2r2c protein_coding protein_coding MGP_WSBEiJ_T0070171.1 MGP_WSBEiJ_G0028685.1 mouse_genomes_project 5 34985589 34986347 + Ppp2r2c protein_coding processed_transcript MGP_WSBEiJ_T0001745.1 MGP_WSBEiJ_G0001667.1 mouse_genomes_project 5 120088954 120089876 - TEC TEC MGP_WSBEiJ_T0001426.1 MGP_WSBEiJ_G0001354.1 mouse_genomes_project 5 13754424 13755412 + TEC TEC MGP_WSBEiJ_T0074056.1 MGP_WSBEiJ_G0029420.1 mouse_genomes_project 5 141369686 141370600 + MGP_WSBEiJ_P0074056 Ppp1r35 protein_coding protein_coding MGP_WSBEiJ_T0074057.1 MGP_WSBEiJ_G0029420.1 mouse_genomes_project 5 141369741 141370948 + MGP_WSBEiJ_P0074057 Ppp1r35 protein_coding protein_coding MGP_WSBEiJ_T0074058.1 MGP_WSBEiJ_G0029420.1 mouse_genomes_project 5 141370274 141370944 + MGP_WSBEiJ_P0074058 Ppp1r35 protein_coding protein_coding MGP_WSBEiJ_T0074059.1 MGP_WSBEiJ_G0029420.1 mouse_genomes_project 5 141370381 141370948 + Ppp1r35 protein_coding retained_intron MGP_WSBEiJ_T0014756.1 MGP_WSBEiJ_G0012886.1 mouse_genomes_project 5 150298587 150299404 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074758.1 MGP_WSBEiJ_G0029572.1 mouse_genomes_project 5 153367348 153426380 - MGP_WSBEiJ_P0074758 Katnal1 protein_coding protein_coding MGP_WSBEiJ_T0074759.1 MGP_WSBEiJ_G0029572.1 mouse_genomes_project 5 153371412 153375318 - Katnal1 protein_coding retained_intron MGP_WSBEiJ_T0074760.1 MGP_WSBEiJ_G0029572.1 mouse_genomes_project 5 153371868 153426864 - MGP_WSBEiJ_P0074760 Katnal1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0074761.1 MGP_WSBEiJ_G0029572.1 mouse_genomes_project 5 153382712 153426733 - Katnal1 protein_coding processed_transcript MGP_WSBEiJ_T0074762.1 MGP_WSBEiJ_G0029572.1 mouse_genomes_project 5 153390688 153427041 - MGP_WSBEiJ_P0074762 Katnal1 protein_coding protein_coding MGP_WSBEiJ_T0074764.1 MGP_WSBEiJ_G0029572.1 mouse_genomes_project 5 153401468 153426361 - MGP_WSBEiJ_P0074764 Katnal1 protein_coding protein_coding MGP_WSBEiJ_T0074765.1 MGP_WSBEiJ_G0029572.1 mouse_genomes_project 5 153422353 153426398 - Katnal1 protein_coding processed_transcript MGP_WSBEiJ_T0069341.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22861618 23042758 - MGP_WSBEiJ_P0069341 Kmt2c protein_coding unknown_likely_coding MGP_WSBEiJ_T0069342.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22861627 22890863 - MGP_WSBEiJ_P0069342 Kmt2c protein_coding protein_coding MGP_WSBEiJ_T0069343.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22862255 22899337 - MGP_WSBEiJ_P0069343 Kmt2c protein_coding protein_coding MGP_WSBEiJ_T0069344.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22863438 23099825 - MGP_WSBEiJ_P0069344 Kmt2c protein_coding protein_coding MGP_WSBEiJ_T0069345.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22865480 22872186 - Kmt2c protein_coding retained_intron MGP_WSBEiJ_T0069346.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22879906 22884167 - Kmt2c protein_coding retained_intron MGP_WSBEiJ_T0069347.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22906727 23099782 - MGP_WSBEiJ_P0069347 Kmt2c protein_coding protein_coding MGP_WSBEiJ_T0069348.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22963747 23099835 - MGP_WSBEiJ_P0069348 Kmt2c protein_coding protein_coding MGP_WSBEiJ_T0069349.1 MGP_WSBEiJ_G0028550.1 mouse_genomes_project 5 22975913 23099863 - Kmt2c protein_coding retained_intron MGP_WSBEiJ_T0070273.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36620596 36656945 - MGP_WSBEiJ_P0070273 Wdr1 protein_coding protein_coding MGP_WSBEiJ_T0070274.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36621362 36623892 - Wdr1 protein_coding retained_intron MGP_WSBEiJ_T0070275.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36621503 36623780 - Wdr1 protein_coding retained_intron MGP_WSBEiJ_T0070276.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36622960 36623616 - Wdr1 protein_coding retained_intron MGP_WSBEiJ_T0070277.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36623733 36625762 - Wdr1 protein_coding processed_transcript MGP_WSBEiJ_T0070278.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36629183 36656670 - MGP_WSBEiJ_P0070278 Wdr1 protein_coding protein_coding MGP_WSBEiJ_T0070279.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36633893 36656689 - Wdr1 protein_coding retained_intron MGP_WSBEiJ_T0070280.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36639382 36658391 - Wdr1 protein_coding processed_transcript MGP_WSBEiJ_T0070281.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36644929 36656945 - Wdr1 protein_coding retained_intron MGP_WSBEiJ_T0070282.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36651348 36656682 - Wdr1 protein_coding retained_intron MGP_WSBEiJ_T0070283.1 MGP_WSBEiJ_G0028702.1 mouse_genomes_project 5 36656047 36656714 - Wdr1 protein_coding retained_intron MGP_WSBEiJ_T0070131.1 MGP_WSBEiJ_G0028677.1 mouse_genomes_project 5 34512943 34521946 + MGP_WSBEiJ_P0070131 Grpel1 protein_coding protein_coding MGP_WSBEiJ_T0071525.1 MGP_WSBEiJ_G0028953.1 mouse_genomes_project 5 96907719 97328793 + MGP_WSBEiJ_P0071525 Fras1 protein_coding protein_coding MGP_WSBEiJ_T0071526.1 MGP_WSBEiJ_G0028953.1 mouse_genomes_project 5 96907970 97080675 + Fras1 protein_coding retained_intron MGP_WSBEiJ_T0071527.1 MGP_WSBEiJ_G0028953.1 mouse_genomes_project 5 96908199 96921097 + Fras1 protein_coding retained_intron MGP_WSBEiJ_T0071528.1 MGP_WSBEiJ_G0028953.1 mouse_genomes_project 5 97153114 97176464 + Fras1 protein_coding processed_transcript MGP_WSBEiJ_T0071529.1 MGP_WSBEiJ_G0028953.1 mouse_genomes_project 5 97153329 97176576 + Fras1 protein_coding processed_transcript MGP_WSBEiJ_T0071530.1 MGP_WSBEiJ_G0028953.1 mouse_genomes_project 5 97168328 97176464 + Fras1 protein_coding processed_transcript MGP_WSBEiJ_T0014744.1 MGP_WSBEiJ_G0012874.1 mouse_genomes_project 5 148167527 148168484 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074122.1 MGP_WSBEiJ_G0029435.1 mouse_genomes_project 5 141770617 141779239 - MGP_WSBEiJ_P0074122 Taf6 protein_coding protein_coding MGP_WSBEiJ_T0074123.1 MGP_WSBEiJ_G0029435.1 mouse_genomes_project 5 141770617 141779464 - MGP_WSBEiJ_P0074123 Taf6 protein_coding protein_coding MGP_WSBEiJ_T0074124.1 MGP_WSBEiJ_G0029435.1 mouse_genomes_project 5 141770620 141779218 - MGP_WSBEiJ_P0074124 Taf6 protein_coding protein_coding MGP_WSBEiJ_T0074125.1 MGP_WSBEiJ_G0029435.1 mouse_genomes_project 5 141770628 141779234 - MGP_WSBEiJ_P0074125 Taf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074126.1 MGP_WSBEiJ_G0029435.1 mouse_genomes_project 5 141772133 141773456 - Taf6 protein_coding retained_intron MGP_WSBEiJ_T0074127.1 MGP_WSBEiJ_G0029435.1 mouse_genomes_project 5 141774678 141779239 - MGP_WSBEiJ_P0074127 Taf6 protein_coding protein_coding MGP_WSBEiJ_T0074128.1 MGP_WSBEiJ_G0029435.1 mouse_genomes_project 5 141775936 141779228 - MGP_WSBEiJ_P0074128 Taf6 protein_coding protein_coding MGP_WSBEiJ_T0074129.1 MGP_WSBEiJ_G0029435.1 mouse_genomes_project 5 141778090 141779229 - Taf6 protein_coding processed_transcript MGP_WSBEiJ_T0074139.1 MGP_WSBEiJ_G0029439.1 mouse_genomes_project 5 141848612 141853799 + MGP_WSBEiJ_P0074139 Lamtor4 protein_coding protein_coding MGP_WSBEiJ_T0074140.1 MGP_WSBEiJ_G0029439.1 mouse_genomes_project 5 141848961 141853802 + Lamtor4 protein_coding processed_transcript MGP_WSBEiJ_T0004570.1 MGP_WSBEiJ_G0003957.1 mouse_genomes_project 5 22455001 22457394 + Prkag2os2 antisense antisense MGP_WSBEiJ_T0004590.1 MGP_WSBEiJ_G0003975.1 mouse_genomes_project 5 33729116 33731047 + Gm15650 antisense antisense MGP_WSBEiJ_T0008328.1 MGP_WSBEiJ_G0006762.1 mouse_genomes_project 5 153711706 153712734 + Gm43332 lincRNA lincRNA MGP_WSBEiJ_T0001594.1 MGP_WSBEiJ_G0001517.1 mouse_genomes_project 5 64630632 64632375 + TEC TEC MGP_WSBEiJ_T0098371.1 MGP_WSBEiJ_G0037034.1 mouse_genomes_project 5 105862778 105862885 + Gm24097 snRNA snRNA MGP_WSBEiJ_T0001614.1 MGP_WSBEiJ_G0001537.1 mouse_genomes_project 5 65722548 65724932 - TEC TEC MGP_WSBEiJ_T0008269.1 MGP_WSBEiJ_G0006713.1 mouse_genomes_project 5 132362483 132363643 + Gm43001 lincRNA lincRNA MGP_WSBEiJ_T0008270.1 MGP_WSBEiJ_G0006713.1 mouse_genomes_project 5 132363041 132363554 + Gm43001 lincRNA lincRNA MGP_WSBEiJ_T0071338.1 MGP_WSBEiJ_G0028908.1 mouse_genomes_project 5 90678246 90679534 + MGP_WSBEiJ_P0071338 Gm9958 protein_coding protein_coding MGP_WSBEiJ_T0001658.1 MGP_WSBEiJ_G0001580.1 mouse_genomes_project 5 74598656 74599106 - TEC TEC MGP_WSBEiJ_T0014516.1 MGP_WSBEiJ_G0012646.1 mouse_genomes_project 5 37470360 37470817 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008177.1 MGP_WSBEiJ_G0006656.1 mouse_genomes_project 5 116322854 116325582 + Gm13790 lincRNA lincRNA MGP_WSBEiJ_T0070865.1 MGP_WSBEiJ_G0028805.1 mouse_genomes_project 5 71973842 71997086 + MGP_WSBEiJ_P0070865 Nipal1 protein_coding protein_coding MGP_WSBEiJ_T0070866.1 MGP_WSBEiJ_G0028805.1 mouse_genomes_project 5 71973860 71993650 + MGP_WSBEiJ_P0070866 Nipal1 protein_coding protein_coding MGP_WSBEiJ_T0070867.1 MGP_WSBEiJ_G0028805.1 mouse_genomes_project 5 71973889 71985170 + Nipal1 protein_coding retained_intron MGP_WSBEiJ_T0007926.1 MGP_WSBEiJ_G0006479.1 mouse_genomes_project 5 20123184 20131200 - A930003O13Rik lincRNA lincRNA MGP_WSBEiJ_T0007927.1 MGP_WSBEiJ_G0006479.1 mouse_genomes_project 5 20123646 20126782 - A930003O13Rik lincRNA lincRNA MGP_WSBEiJ_T0007928.1 MGP_WSBEiJ_G0006479.1 mouse_genomes_project 5 20128334 20131220 - A930003O13Rik lincRNA lincRNA MGP_WSBEiJ_T0001422.1 MGP_WSBEiJ_G0001350.1 mouse_genomes_project 5 11889025 11891296 + TEC TEC MGP_WSBEiJ_T0074524.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148255577 148285647 - MGP_WSBEiJ_P0074524 Tecpr1 protein_coding protein_coding MGP_WSBEiJ_T0074525.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148256467 148285579 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074526.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148257243 148259291 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074527.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148257248 148260108 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074528.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148259680 148260902 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074529.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148261603 148264702 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074530.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148268610 148269768 - Tecpr1 protein_coding processed_transcript MGP_WSBEiJ_T0074531.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148270389 148277633 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074532.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148270411 148285584 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074533.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148273115 148285638 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074534.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148280348 148285590 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0074535.1 MGP_WSBEiJ_G0029522.1 mouse_genomes_project 5 148282423 148285555 - Tecpr1 protein_coding retained_intron MGP_WSBEiJ_T0097403.1 MGP_WSBEiJ_G0036077.1 mouse_genomes_project 5 1773582 1775501 - Gm43111 sense_intronic sense_intronic MGP_WSBEiJ_T0001437.1 MGP_WSBEiJ_G0001365.1 mouse_genomes_project 5 21994705 21996813 - TEC TEC MGP_WSBEiJ_T0001438.1 MGP_WSBEiJ_G0001365.1 mouse_genomes_project 5 21996271 21996811 - TEC TEC MGP_WSBEiJ_T0001590.1 MGP_WSBEiJ_G0001513.1 mouse_genomes_project 5 64496132 64498509 - TEC TEC MGP_WSBEiJ_T0001495.1 MGP_WSBEiJ_G0001420.1 mouse_genomes_project 5 42569174 42569517 + TEC TEC MGP_WSBEiJ_T0072183.1 MGP_WSBEiJ_G0029089.1 mouse_genomes_project 5 113985838 114152289 - MGP_WSBEiJ_P0072183 Sez6l protein_coding protein_coding MGP_WSBEiJ_T0072184.1 MGP_WSBEiJ_G0029089.1 mouse_genomes_project 5 113985843 114152396 - MGP_WSBEiJ_P0072184 Sez6l protein_coding protein_coding MGP_WSBEiJ_T0072185.1 MGP_WSBEiJ_G0029089.1 mouse_genomes_project 5 113985852 114152606 - MGP_WSBEiJ_P0072185 Sez6l protein_coding protein_coding MGP_WSBEiJ_T0072186.1 MGP_WSBEiJ_G0029089.1 mouse_genomes_project 5 113988504 114152598 - MGP_WSBEiJ_P0072186 Sez6l protein_coding protein_coding MGP_WSBEiJ_T0073323.1 MGP_WSBEiJ_G0029292.1 mouse_genomes_project 5 130080518 130424768 + MGP_WSBEiJ_P0073323 Tmem132c protein_coding protein_coding MGP_WSBEiJ_T0073324.1 MGP_WSBEiJ_G0029292.1 mouse_genomes_project 5 130080536 130123247 + Tmem132c protein_coding processed_transcript MGP_WSBEiJ_T0073325.1 MGP_WSBEiJ_G0029292.1 mouse_genomes_project 5 130408827 130423841 + Tmem132c protein_coding processed_transcript MGP_WSBEiJ_T0073326.1 MGP_WSBEiJ_G0029292.1 mouse_genomes_project 5 130410578 130423461 + MGP_WSBEiJ_P0073326 Tmem132c protein_coding protein_coding MGP_WSBEiJ_T0071676.1 MGP_WSBEiJ_G0028984.1 mouse_genomes_project 5 102589946 102650170 + MGP_WSBEiJ_P0071676 Cds1 protein_coding protein_coding MGP_WSBEiJ_T0071677.1 MGP_WSBEiJ_G0028984.1 mouse_genomes_project 5 102632900 102647759 + Cds1 protein_coding retained_intron MGP_WSBEiJ_T0008125.1 MGP_WSBEiJ_G0006626.1 mouse_genomes_project 5 107556763 107633669 - Gm28050 lincRNA lincRNA MGP_WSBEiJ_T0008126.1 MGP_WSBEiJ_G0006626.1 mouse_genomes_project 5 107616746 107633672 - Gm28050 lincRNA lincRNA MGP_WSBEiJ_T0072409.1 MGP_WSBEiJ_G0029132.1 mouse_genomes_project 5 116754590 116762198 + MGP_WSBEiJ_P0072409 2210016L21Rik protein_coding protein_coding MGP_WSBEiJ_T0072410.1 MGP_WSBEiJ_G0029132.1 mouse_genomes_project 5 116754636 116759287 + 2210016L21Rik protein_coding retained_intron MGP_WSBEiJ_T0072411.1 MGP_WSBEiJ_G0029132.1 mouse_genomes_project 5 116754642 116759253 + MGP_WSBEiJ_P0072411 2210016L21Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072412.1 MGP_WSBEiJ_G0029132.1 mouse_genomes_project 5 116754663 116758624 + 2210016L21Rik protein_coding retained_intron MGP_WSBEiJ_T0072413.1 MGP_WSBEiJ_G0029132.1 mouse_genomes_project 5 116758211 116760199 + MGP_WSBEiJ_P0072413 2210016L21Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0007939.1 MGP_WSBEiJ_G0006487.1 mouse_genomes_project 5 23271473 23271823 - Gm10062 lincRNA lincRNA MGP_WSBEiJ_T0007941.1 MGP_WSBEiJ_G0006487.1 mouse_genomes_project 5 23271480 23272944 - Gm10062 lincRNA lincRNA MGP_WSBEiJ_T0070859.1 MGP_WSBEiJ_G0028804.1 mouse_genomes_project 5 71928347 71968739 - MGP_WSBEiJ_P0070859 Cnga1 protein_coding protein_coding MGP_WSBEiJ_T0070860.1 MGP_WSBEiJ_G0028804.1 mouse_genomes_project 5 71928347 71943948 - MGP_WSBEiJ_P0070860 Cnga1 protein_coding protein_coding MGP_WSBEiJ_T0070861.1 MGP_WSBEiJ_G0028804.1 mouse_genomes_project 5 71928766 71963876 - MGP_WSBEiJ_P0070861 Cnga1 protein_coding protein_coding MGP_WSBEiJ_T0070862.1 MGP_WSBEiJ_G0028804.1 mouse_genomes_project 5 71939927 71963881 - MGP_WSBEiJ_P0070862 Cnga1 protein_coding protein_coding MGP_WSBEiJ_T0070863.1 MGP_WSBEiJ_G0028804.1 mouse_genomes_project 5 71943822 71957190 - MGP_WSBEiJ_P0070863 Cnga1 protein_coding protein_coding MGP_WSBEiJ_T0070864.1 MGP_WSBEiJ_G0028804.1 mouse_genomes_project 5 71968258 71970250 - Cnga1 protein_coding retained_intron MGP_WSBEiJ_T0069236.1 MGP_WSBEiJ_G0028530.1 mouse_genomes_project 5 21954162 21958603 + MGP_WSBEiJ_P0069236 Asic3 protein_coding protein_coding MGP_WSBEiJ_T0069237.1 MGP_WSBEiJ_G0028530.1 mouse_genomes_project 5 21954221 21958603 + Asic3 protein_coding retained_intron MGP_WSBEiJ_T0069238.1 MGP_WSBEiJ_G0028530.1 mouse_genomes_project 5 21954482 21958515 + MGP_WSBEiJ_P0069238 Asic3 protein_coding protein_coding MGP_WSBEiJ_T0069239.1 MGP_WSBEiJ_G0028530.1 mouse_genomes_project 5 21956508 21958603 + Asic3 protein_coding retained_intron MGP_WSBEiJ_T0069240.1 MGP_WSBEiJ_G0028530.1 mouse_genomes_project 5 21957345 21958604 + MGP_WSBEiJ_P0069240 Asic3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069401.1 MGP_WSBEiJ_G0028563.1 mouse_genomes_project 5 26920122 27068885 - MGP_WSBEiJ_P0069401 Lmbr1 protein_coding protein_coding MGP_WSBEiJ_T0069402.1 MGP_WSBEiJ_G0028563.1 mouse_genomes_project 5 26920134 27068891 - MGP_WSBEiJ_P0069402 Lmbr1 protein_coding protein_coding MGP_WSBEiJ_T0069403.1 MGP_WSBEiJ_G0028563.1 mouse_genomes_project 5 26922439 27068803 - MGP_WSBEiJ_P0069403 Lmbr1 protein_coding protein_coding MGP_WSBEiJ_T0069404.1 MGP_WSBEiJ_G0028563.1 mouse_genomes_project 5 26922693 27068885 - MGP_WSBEiJ_P0069404 Lmbr1 protein_coding protein_coding MGP_WSBEiJ_T0069405.1 MGP_WSBEiJ_G0028563.1 mouse_genomes_project 5 26923161 27068831 - MGP_WSBEiJ_P0069405 Lmbr1 protein_coding protein_coding MGP_WSBEiJ_T0069406.1 MGP_WSBEiJ_G0028563.1 mouse_genomes_project 5 26925338 26986947 - MGP_WSBEiJ_P0069406 Lmbr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069407.1 MGP_WSBEiJ_G0028563.1 mouse_genomes_project 5 26949412 27051420 - Lmbr1 protein_coding processed_transcript MGP_WSBEiJ_T0071540.1 MGP_WSBEiJ_G0028955.1 mouse_genomes_project 5 97561049 97659561 + MGP_WSBEiJ_P0071540 Bmp2k protein_coding protein_coding MGP_WSBEiJ_T0071541.1 MGP_WSBEiJ_G0028955.1 mouse_genomes_project 5 97561049 97636736 + MGP_WSBEiJ_P0071541 Bmp2k protein_coding protein_coding MGP_WSBEiJ_T0100857.1 MGP_WSBEiJ_G0039315.1 mouse_genomes_project 5 87061318 87063437 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0073124.1 MGP_WSBEiJ_G0029258.1 mouse_genomes_project 5 126575361 126578646 - MGP_WSBEiJ_P0073124 Hcar1 protein_coding protein_coding MGP_WSBEiJ_T0014524.1 MGP_WSBEiJ_G0012654.1 mouse_genomes_project 5 42617257 42617894 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069136.1 MGP_WSBEiJ_G0028512.1 mouse_genomes_project 5 19167682 19187289 + MGP_WSBEiJ_P0069136 Psmc2 protein_coding protein_coding MGP_WSBEiJ_T0014447.1 MGP_WSBEiJ_G0012577.1 mouse_genomes_project 5 18463346 18464742 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068777.1 MGP_WSBEiJ_G0028452.1 mouse_genomes_project 5 428722 441370 - MGP_WSBEiJ_P0068777 Rbm48 protein_coding protein_coding MGP_WSBEiJ_T0068778.1 MGP_WSBEiJ_G0028452.1 mouse_genomes_project 5 429520 440844 - MGP_WSBEiJ_P0068778 Rbm48 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068779.1 MGP_WSBEiJ_G0028452.1 mouse_genomes_project 5 435523 436887 - Rbm48 protein_coding retained_intron MGP_WSBEiJ_T0068780.1 MGP_WSBEiJ_G0028452.1 mouse_genomes_project 5 436227 440867 - Rbm48 protein_coding retained_intron MGP_WSBEiJ_T0068781.1 MGP_WSBEiJ_G0028452.1 mouse_genomes_project 5 437001 440987 - MGP_WSBEiJ_P0068781 Rbm48 protein_coding protein_coding MGP_WSBEiJ_T0071734.1 MGP_WSBEiJ_G0028995.1 mouse_genomes_project 5 104931457 104944102 + MGP_WSBEiJ_P0071734 Nudt9 protein_coding protein_coding MGP_WSBEiJ_T0071735.1 MGP_WSBEiJ_G0028995.1 mouse_genomes_project 5 104931679 104945682 + MGP_WSBEiJ_P0071735 Nudt9 protein_coding protein_coding MGP_WSBEiJ_T0071736.1 MGP_WSBEiJ_G0028995.1 mouse_genomes_project 5 104932022 104951302 + MGP_WSBEiJ_P0071736 Nudt9 protein_coding protein_coding MGP_WSBEiJ_T0071737.1 MGP_WSBEiJ_G0028995.1 mouse_genomes_project 5 104932121 104944336 + Nudt9 protein_coding retained_intron MGP_WSBEiJ_T0071738.1 MGP_WSBEiJ_G0028995.1 mouse_genomes_project 5 104932307 104944082 + MGP_WSBEiJ_P0071738 Nudt9 protein_coding protein_coding MGP_WSBEiJ_T0071739.1 MGP_WSBEiJ_G0028995.1 mouse_genomes_project 5 104932774 104941449 + MGP_WSBEiJ_P0071739 Nudt9 protein_coding protein_coding MGP_WSBEiJ_T0071393.1 MGP_WSBEiJ_G0028929.1 mouse_genomes_project 5 92374944 92416353 - MGP_WSBEiJ_P0071393 Cdkl2 protein_coding protein_coding MGP_WSBEiJ_T0071394.1 MGP_WSBEiJ_G0028929.1 mouse_genomes_project 5 92374944 92416354 - MGP_WSBEiJ_P0071394 Cdkl2 protein_coding protein_coding MGP_WSBEiJ_T0071395.1 MGP_WSBEiJ_G0028929.1 mouse_genomes_project 5 92376674 92416008 - MGP_WSBEiJ_P0071395 Cdkl2 protein_coding protein_coding MGP_WSBEiJ_T0071396.1 MGP_WSBEiJ_G0028929.1 mouse_genomes_project 5 92376693 92415984 - MGP_WSBEiJ_P0071396 Cdkl2 protein_coding protein_coding MGP_WSBEiJ_T0071397.1 MGP_WSBEiJ_G0028929.1 mouse_genomes_project 5 92376906 92388474 - Cdkl2 protein_coding retained_intron MGP_WSBEiJ_T0071398.1 MGP_WSBEiJ_G0028929.1 mouse_genomes_project 5 92392841 92402859 - MGP_WSBEiJ_P0071398 Cdkl2 protein_coding protein_coding MGP_WSBEiJ_T0071399.1 MGP_WSBEiJ_G0028929.1 mouse_genomes_project 5 92415578 92417200 - Cdkl2 protein_coding TEC MGP_WSBEiJ_T0070605.1 MGP_WSBEiJ_G0028762.1 mouse_genomes_project 5 64337427 64417595 - MGP_WSBEiJ_P0070605 Rfc1 protein_coding protein_coding MGP_WSBEiJ_T0070606.1 MGP_WSBEiJ_G0028762.1 mouse_genomes_project 5 64337429 64417652 - MGP_WSBEiJ_P0070606 Rfc1 protein_coding protein_coding MGP_WSBEiJ_T0070607.1 MGP_WSBEiJ_G0028762.1 mouse_genomes_project 5 64337429 64417701 - MGP_WSBEiJ_P0070607 Rfc1 protein_coding protein_coding MGP_WSBEiJ_T0070608.1 MGP_WSBEiJ_G0028762.1 mouse_genomes_project 5 64338179 64417649 - MGP_WSBEiJ_P0070608 Rfc1 protein_coding protein_coding MGP_WSBEiJ_T0070609.1 MGP_WSBEiJ_G0028762.1 mouse_genomes_project 5 64338653 64347010 - MGP_WSBEiJ_P0070609 Rfc1 protein_coding protein_coding MGP_WSBEiJ_T0070610.1 MGP_WSBEiJ_G0028762.1 mouse_genomes_project 5 64339823 64351508 - Rfc1 protein_coding retained_intron MGP_WSBEiJ_T0070611.1 MGP_WSBEiJ_G0028762.1 mouse_genomes_project 5 64388627 64417644 - Rfc1 protein_coding retained_intron MGP_WSBEiJ_T0070200.1 MGP_WSBEiJ_G0028689.1 mouse_genomes_project 5 35363707 35401893 - MGP_WSBEiJ_P0070200 Evc protein_coding protein_coding MGP_WSBEiJ_T0070201.1 MGP_WSBEiJ_G0028689.1 mouse_genomes_project 5 35364264 35371554 - MGP_WSBEiJ_P0070201 Evc protein_coding protein_coding MGP_WSBEiJ_T0070202.1 MGP_WSBEiJ_G0028689.1 mouse_genomes_project 5 35364981 35376693 - Evc protein_coding retained_intron MGP_WSBEiJ_T0070203.1 MGP_WSBEiJ_G0028689.1 mouse_genomes_project 5 35365026 35366156 - MGP_WSBEiJ_P0070203 Evc protein_coding protein_coding MGP_WSBEiJ_T0070204.1 MGP_WSBEiJ_G0028689.1 mouse_genomes_project 5 35377597 35401966 - MGP_WSBEiJ_P0070204 Evc protein_coding protein_coding MGP_WSBEiJ_T0070205.1 MGP_WSBEiJ_G0028689.1 mouse_genomes_project 5 35378847 35382644 - Evc protein_coding retained_intron MGP_WSBEiJ_T0070206.1 MGP_WSBEiJ_G0028689.1 mouse_genomes_project 5 35380483 35382763 - Evc protein_coding retained_intron MGP_WSBEiJ_T0070207.1 MGP_WSBEiJ_G0028689.1 mouse_genomes_project 5 35383455 35401978 - Evc protein_coding retained_intron MGP_WSBEiJ_T0004807.1 MGP_WSBEiJ_G0004130.1 mouse_genomes_project 5 151598731 151649397 - 2210019I11Rik antisense antisense MGP_WSBEiJ_T0004808.1 MGP_WSBEiJ_G0004130.1 mouse_genomes_project 5 151600891 151649378 - 2210019I11Rik antisense antisense MGP_WSBEiJ_T0004809.1 MGP_WSBEiJ_G0004130.1 mouse_genomes_project 5 151611729 151648871 - 2210019I11Rik antisense antisense MGP_WSBEiJ_T0014717.1 MGP_WSBEiJ_G0012847.1 mouse_genomes_project 5 139327369 139327523 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071761.1 MGP_WSBEiJ_G0029006.1 mouse_genomes_project 5 105861177 105913855 - MGP_WSBEiJ_P0071761 Abcg3 protein_coding protein_coding MGP_WSBEiJ_T0071762.1 MGP_WSBEiJ_G0029006.1 mouse_genomes_project 5 105861806 105908968 - MGP_WSBEiJ_P0071762 Abcg3 protein_coding protein_coding MGP_WSBEiJ_T0098349.1 MGP_WSBEiJ_G0037012.1 mouse_genomes_project 5 69430064 69430126 - Gm23067 snRNA snRNA MGP_WSBEiJ_T0014615.1 MGP_WSBEiJ_G0012745.1 mouse_genomes_project 5 87701170 87703085 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004621.1 MGP_WSBEiJ_G0003998.1 mouse_genomes_project 5 65318836 65342845 + Gm26725 antisense antisense MGP_WSBEiJ_T0001767.1 MGP_WSBEiJ_G0001689.1 mouse_genomes_project 5 125044621 125046817 - TEC TEC MGP_WSBEiJ_T0072036.1 MGP_WSBEiJ_G0029062.1 mouse_genomes_project 5 111643247 111673319 + MGP_WSBEiJ_P0072036 Ankle2 protein_coding protein_coding MGP_WSBEiJ_T0072037.1 MGP_WSBEiJ_G0029062.1 mouse_genomes_project 5 111643247 111672132 + MGP_WSBEiJ_P0072037 Ankle2 protein_coding protein_coding MGP_WSBEiJ_T0072038.1 MGP_WSBEiJ_G0029062.1 mouse_genomes_project 5 111643284 111673315 + MGP_WSBEiJ_P0072038 Ankle2 protein_coding protein_coding MGP_WSBEiJ_T0072039.1 MGP_WSBEiJ_G0029062.1 mouse_genomes_project 5 111643406 111651001 + Ankle2 protein_coding retained_intron MGP_WSBEiJ_T0072040.1 MGP_WSBEiJ_G0029062.1 mouse_genomes_project 5 111643480 111671183 + MGP_WSBEiJ_P0072040 Ankle2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072041.1 MGP_WSBEiJ_G0029062.1 mouse_genomes_project 5 111650341 111651083 + Ankle2 protein_coding retained_intron MGP_WSBEiJ_T0072042.1 MGP_WSBEiJ_G0029062.1 mouse_genomes_project 5 111667307 111669728 + Ankle2 protein_coding processed_transcript MGP_WSBEiJ_T0014693.1 MGP_WSBEiJ_G0012823.1 mouse_genomes_project 5 118610459 118611116 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008018.1 MGP_WSBEiJ_G0006544.1 mouse_genomes_project 5 63518742 63525705 + C030018K13Rik lincRNA lincRNA MGP_WSBEiJ_T0008019.1 MGP_WSBEiJ_G0006544.1 mouse_genomes_project 5 63518748 63521485 + C030018K13Rik lincRNA lincRNA MGP_WSBEiJ_T0008020.1 MGP_WSBEiJ_G0006544.1 mouse_genomes_project 5 63518769 63524203 + C030018K13Rik lincRNA lincRNA MGP_WSBEiJ_T0008229.1 MGP_WSBEiJ_G0006690.1 mouse_genomes_project 5 125754102 125756764 + 4932422M17Rik lincRNA lincRNA MGP_WSBEiJ_T0004636.1 MGP_WSBEiJ_G0004011.1 mouse_genomes_project 5 73417945 73435374 + Usp46os1 antisense antisense MGP_WSBEiJ_T0010560.1 MGP_WSBEiJ_G0008717.1 mouse_genomes_project 5 141756689 141756771 - Mir106b miRNA miRNA MGP_WSBEiJ_T0007946.1 MGP_WSBEiJ_G0006490.1 mouse_genomes_project 5 25695954 25748801 - Gm26608 lincRNA lincRNA MGP_WSBEiJ_T0007947.1 MGP_WSBEiJ_G0006490.1 mouse_genomes_project 5 25732177 25733686 - Gm26608 lincRNA lincRNA MGP_WSBEiJ_T0001555.1 MGP_WSBEiJ_G0001479.1 mouse_genomes_project 5 50624877 50627749 + TEC TEC MGP_WSBEiJ_T0001684.1 MGP_WSBEiJ_G0001606.1 mouse_genomes_project 5 98600508 98602075 - TEC TEC MGP_WSBEiJ_T0099584.1 MGP_WSBEiJ_G0038247.1 mouse_genomes_project 5 21179530 21179599 - Snord93 snoRNA snoRNA MGP_WSBEiJ_T0014623.1 MGP_WSBEiJ_G0012753.1 mouse_genomes_project 5 89053087 89054477 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070521.1 MGP_WSBEiJ_G0028744.1 mouse_genomes_project 5 52215208 52222730 - MGP_WSBEiJ_P0070521 Cckar protein_coding protein_coding MGP_WSBEiJ_T0070522.1 MGP_WSBEiJ_G0028744.1 mouse_genomes_project 5 52221720 52222933 - Cckar protein_coding processed_transcript MGP_WSBEiJ_T0014433.1 MGP_WSBEiJ_G0012563.1 mouse_genomes_project 5 12995473 12995882 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001667.1 MGP_WSBEiJ_G0001589.1 mouse_genomes_project 5 87432353 87433373 + TEC TEC MGP_WSBEiJ_T0017592.1 MGP_WSBEiJ_G0015033.1 mouse_genomes_project 5 126034831 126037540 + Gm43813 processed_transcript sense_intronic MGP_WSBEiJ_T0017593.1 MGP_WSBEiJ_G0015033.1 mouse_genomes_project 5 126034831 126040163 + Gm43813 processed_transcript TEC MGP_WSBEiJ_T0008349.1 MGP_WSBEiJ_G0006774.1 mouse_genomes_project 5 155458411 155505926 + Gm43299 lincRNA lincRNA MGP_WSBEiJ_T0014474.1 MGP_WSBEiJ_G0012604.1 mouse_genomes_project 5 23049165 23049769 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099618.1 MGP_WSBEiJ_G0038281.1 mouse_genomes_project 5 111762233 111762385 + Gm26277 snoRNA snoRNA MGP_WSBEiJ_T0014529.1 MGP_WSBEiJ_G0012659.1 mouse_genomes_project 5 46996584 46997949 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071303.1 MGP_WSBEiJ_G0028902.1 mouse_genomes_project 5 89101348 89102354 + Slc4a4 protein_coding processed_transcript MGP_WSBEiJ_T0071304.1 MGP_WSBEiJ_G0028902.1 mouse_genomes_project 5 89101384 89461076 + MGP_WSBEiJ_P0071304 Slc4a4 protein_coding protein_coding MGP_WSBEiJ_T0071305.1 MGP_WSBEiJ_G0028902.1 mouse_genomes_project 5 89101386 89462003 + MGP_WSBEiJ_P0071305 Slc4a4 protein_coding protein_coding MGP_WSBEiJ_T0071306.1 MGP_WSBEiJ_G0028902.1 mouse_genomes_project 5 89150762 89170950 + MGP_WSBEiJ_P0071306 Slc4a4 protein_coding protein_coding MGP_WSBEiJ_T0071307.1 MGP_WSBEiJ_G0028902.1 mouse_genomes_project 5 89150980 89461821 + MGP_WSBEiJ_P0071307 Slc4a4 protein_coding protein_coding MGP_WSBEiJ_T0071308.1 MGP_WSBEiJ_G0028902.1 mouse_genomes_project 5 89242820 89461070 + MGP_WSBEiJ_P0071308 Slc4a4 protein_coding protein_coding MGP_WSBEiJ_T0071309.1 MGP_WSBEiJ_G0028902.1 mouse_genomes_project 5 89242931 89257219 + MGP_WSBEiJ_P0071309 Slc4a4 protein_coding protein_coding MGP_WSBEiJ_T0071310.1 MGP_WSBEiJ_G0028902.1 mouse_genomes_project 5 89242946 89338756 + MGP_WSBEiJ_P0071310 Slc4a4 protein_coding protein_coding MGP_WSBEiJ_T0004628.1 MGP_WSBEiJ_G0004004.1 mouse_genomes_project 5 66652034 66662317 + Gm26756 antisense antisense MGP_WSBEiJ_T0011391.1 MGP_WSBEiJ_G0009548.1 mouse_genomes_project 5 22781687 22781970 - Gm26356 misc_RNA misc_RNA MGP_WSBEiJ_T0072921.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125117275 125183651 - MGP_WSBEiJ_P0072921 Ift81 protein_coding protein_coding MGP_WSBEiJ_T0072922.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125117279 125129255 - Ift81 protein_coding retained_intron MGP_WSBEiJ_T0072923.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125137339 125142538 - Ift81 protein_coding processed_transcript MGP_WSBEiJ_T0072924.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125160397 125172624 - MGP_WSBEiJ_P0072924 Ift81 protein_coding protein_coding MGP_WSBEiJ_T0072925.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125171308 125183639 - Ift81 protein_coding retained_intron MGP_WSBEiJ_T0072926.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125171439 125183578 - MGP_WSBEiJ_P0072926 Ift81 protein_coding protein_coding MGP_WSBEiJ_T0072927.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125171474 125183634 - MGP_WSBEiJ_P0072927 Ift81 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072928.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125174075 125176521 - Ift81 protein_coding retained_intron MGP_WSBEiJ_T0072929.1 MGP_WSBEiJ_G0029231.1 mouse_genomes_project 5 125176184 125183649 - MGP_WSBEiJ_P0072929 Ift81 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001399.1 MGP_WSBEiJ_G0001327.1 mouse_genomes_project 5 4214378 4216747 - TEC TEC MGP_WSBEiJ_T0073047.1 MGP_WSBEiJ_G0029247.1 mouse_genomes_project 5 126023180 126084242 + MGP_WSBEiJ_P0073047 Mlxip protein_coding protein_coding MGP_WSBEiJ_T0073048.1 MGP_WSBEiJ_G0029247.1 mouse_genomes_project 5 126023182 126096312 + MGP_WSBEiJ_P0073048 Mlxip protein_coding protein_coding MGP_WSBEiJ_T0073049.1 MGP_WSBEiJ_G0029247.1 mouse_genomes_project 5 126083559 126096309 + MGP_WSBEiJ_P0073049 Mlxip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073050.1 MGP_WSBEiJ_G0029247.1 mouse_genomes_project 5 126089806 126091927 + Mlxip protein_coding processed_transcript MGP_WSBEiJ_T0071578.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100652682 100675519 - MGP_WSBEiJ_P0071578 Hnrnpd protein_coding protein_coding MGP_WSBEiJ_T0071579.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100657295 100675518 - MGP_WSBEiJ_P0071579 Hnrnpd protein_coding protein_coding MGP_WSBEiJ_T0071580.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100657695 100675498 - MGP_WSBEiJ_P0071580 Hnrnpd protein_coding protein_coding MGP_WSBEiJ_T0071581.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100657699 100675516 - MGP_WSBEiJ_P0071581 Hnrnpd protein_coding protein_coding MGP_WSBEiJ_T0071582.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100657700 100673214 - MGP_WSBEiJ_P0071582 Hnrnpd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071583.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100657848 100662872 - MGP_WSBEiJ_P0071583 Hnrnpd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071584.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100657865 100661448 - MGP_WSBEiJ_P0071584 Hnrnpd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071585.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100658980 100675205 - MGP_WSBEiJ_P0071585 Hnrnpd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071586.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100661440 100663085 - Hnrnpd protein_coding retained_intron MGP_WSBEiJ_T0071587.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100662724 100675515 - MGP_WSBEiJ_P0071587 Hnrnpd protein_coding protein_coding MGP_WSBEiJ_T0071588.1 MGP_WSBEiJ_G0028968.1 mouse_genomes_project 5 100664003 100675440 - MGP_WSBEiJ_P0071588 Hnrnpd protein_coding protein_coding MGP_WSBEiJ_T0068894.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2606028 2637327 - MGP_WSBEiJ_P0068894 Steap2 protein_coding protein_coding MGP_WSBEiJ_T0068895.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2606030 2625183 - MGP_WSBEiJ_P0068895 Steap2 protein_coding protein_coding MGP_WSBEiJ_T0068896.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2607153 2636809 - MGP_WSBEiJ_P0068896 Steap2 protein_coding protein_coding MGP_WSBEiJ_T0068897.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2613052 2636801 - MGP_WSBEiJ_P0068897 Steap2 protein_coding protein_coding MGP_WSBEiJ_T0068898.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2613609 2636816 - MGP_WSBEiJ_P0068898 Steap2 protein_coding protein_coding MGP_WSBEiJ_T0068899.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2613843 2619405 - Steap2 protein_coding processed_transcript MGP_WSBEiJ_T0068900.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2613848 2636809 - MGP_WSBEiJ_P0068900 Steap2 protein_coding protein_coding MGP_WSBEiJ_T0068901.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2615623 2637075 - MGP_WSBEiJ_P0068901 Steap2 protein_coding protein_coding MGP_WSBEiJ_T0068902.1 MGP_WSBEiJ_G0028469.1 mouse_genomes_project 5 2618214 2637282 - Steap2 protein_coding retained_intron MGP_WSBEiJ_T0074235.1 MGP_WSBEiJ_G0029455.1 mouse_genomes_project 5 143001973 143042099 - Adap1 protein_coding processed_transcript MGP_WSBEiJ_T0074236.1 MGP_WSBEiJ_G0029455.1 mouse_genomes_project 5 143001973 143063050 - MGP_WSBEiJ_P0074236 Adap1 protein_coding protein_coding MGP_WSBEiJ_T0074237.1 MGP_WSBEiJ_G0029455.1 mouse_genomes_project 5 143002873 143038947 - Adap1 protein_coding processed_transcript MGP_WSBEiJ_T0074238.1 MGP_WSBEiJ_G0029455.1 mouse_genomes_project 5 143002955 143042071 - Adap1 protein_coding processed_transcript MGP_WSBEiJ_T0074239.1 MGP_WSBEiJ_G0029455.1 mouse_genomes_project 5 143003027 143004738 - Adap1 protein_coding retained_intron MGP_WSBEiJ_T0074240.1 MGP_WSBEiJ_G0029455.1 mouse_genomes_project 5 143013459 143045208 - Adap1 protein_coding retained_intron MGP_WSBEiJ_T0004796.1 MGP_WSBEiJ_G0004123.1 mouse_genomes_project 5 144040197 144043525 + Gm16120 antisense antisense MGP_WSBEiJ_T0004797.1 MGP_WSBEiJ_G0004123.1 mouse_genomes_project 5 144042314 144043525 + Gm16120 antisense antisense MGP_WSBEiJ_T0008200.1 MGP_WSBEiJ_G0006671.1 mouse_genomes_project 5 120492210 120492732 - Gm28563 lincRNA lincRNA MGP_WSBEiJ_T0074328.1 MGP_WSBEiJ_G0029479.1 mouse_genomes_project 5 144490827 144495021 - MGP_WSBEiJ_P0074328 Ttyh3 protein_coding protein_coding MGP_WSBEiJ_T0074329.1 MGP_WSBEiJ_G0029479.1 mouse_genomes_project 5 144491200 144519801 - MGP_WSBEiJ_P0074329 Ttyh3 protein_coding protein_coding MGP_WSBEiJ_T0074330.1 MGP_WSBEiJ_G0029479.1 mouse_genomes_project 5 144500389 144500863 - Ttyh3 protein_coding retained_intron MGP_WSBEiJ_T0074331.1 MGP_WSBEiJ_G0029479.1 mouse_genomes_project 5 144500772 144505702 - Ttyh3 protein_coding retained_intron MGP_WSBEiJ_T0074332.1 MGP_WSBEiJ_G0029479.1 mouse_genomes_project 5 144519444 144519971 - Ttyh3 protein_coding processed_transcript MGP_WSBEiJ_T0008160.1 MGP_WSBEiJ_G0006646.1 mouse_genomes_project 5 113707258 113716709 + Gm42491 lincRNA lincRNA MGP_WSBEiJ_T0073885.1 MGP_WSBEiJ_G0029389.1 mouse_genomes_project 5 140516266 140522745 - MGP_WSBEiJ_P0073885 Znhit1 protein_coding protein_coding MGP_WSBEiJ_T0073886.1 MGP_WSBEiJ_G0029389.1 mouse_genomes_project 5 140516292 140521625 - MGP_WSBEiJ_P0073886 Znhit1 protein_coding protein_coding MGP_WSBEiJ_T0073887.1 MGP_WSBEiJ_G0029389.1 mouse_genomes_project 5 140516296 140521553 - MGP_WSBEiJ_P0073887 Znhit1 protein_coding protein_coding MGP_WSBEiJ_T0073888.1 MGP_WSBEiJ_G0029389.1 mouse_genomes_project 5 140516398 140522267 - MGP_WSBEiJ_P0073888 Znhit1 protein_coding protein_coding MGP_WSBEiJ_T0073889.1 MGP_WSBEiJ_G0029389.1 mouse_genomes_project 5 140516423 140521956 - MGP_WSBEiJ_P0073889 Znhit1 protein_coding protein_coding MGP_WSBEiJ_T0073890.1 MGP_WSBEiJ_G0029389.1 mouse_genomes_project 5 140517648 140522232 - MGP_WSBEiJ_P0073890 Znhit1 protein_coding protein_coding MGP_WSBEiJ_T0071213.1 MGP_WSBEiJ_G0028874.1 mouse_genomes_project 5 87595546 87629289 - MGP_WSBEiJ_P0071213 Sult1b1 protein_coding protein_coding MGP_WSBEiJ_T0071214.1 MGP_WSBEiJ_G0028874.1 mouse_genomes_project 5 87596821 87621043 - MGP_WSBEiJ_P0071214 Sult1b1 protein_coding protein_coding MGP_WSBEiJ_T0071215.1 MGP_WSBEiJ_G0028874.1 mouse_genomes_project 5 87597846 87619967 - MGP_WSBEiJ_P0071215 Sult1b1 protein_coding protein_coding MGP_WSBEiJ_T0001781.1 MGP_WSBEiJ_G0001703.1 mouse_genomes_project 5 126988443 126990049 - TEC TEC MGP_WSBEiJ_T0010568.1 MGP_WSBEiJ_G0008725.1 mouse_genomes_project 5 149005042 149005127 - Mir7039 miRNA miRNA MGP_WSBEiJ_T0004639.1 MGP_WSBEiJ_G0004013.1 mouse_genomes_project 5 74596837 74597436 - Gm42802 antisense antisense MGP_WSBEiJ_T0001795.1 MGP_WSBEiJ_G0001716.1 mouse_genomes_project 5 131503702 131505073 - TEC TEC MGP_WSBEiJ_T0001710.1 MGP_WSBEiJ_G0001632.1 mouse_genomes_project 5 109465687 109467067 - TEC TEC MGP_WSBEiJ_T0007961.1 MGP_WSBEiJ_G0006501.1 mouse_genomes_project 5 32259471 32280582 - Gm43458 lincRNA lincRNA MGP_WSBEiJ_T0098351.1 MGP_WSBEiJ_G0037014.1 mouse_genomes_project 5 71578542 71578640 - Gm25768 snRNA snRNA MGP_WSBEiJ_T0014639.1 MGP_WSBEiJ_G0012769.1 mouse_genomes_project 5 100284047 100284856 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072216.1 MGP_WSBEiJ_G0029096.1 mouse_genomes_project 5 114855524 114871625 + MGP_WSBEiJ_P0072216 Tmem211 protein_coding protein_coding MGP_WSBEiJ_T0072343.1 MGP_WSBEiJ_G0029120.1 mouse_genomes_project 5 116339442 116391275 + MGP_WSBEiJ_P0072343 Fam222a protein_coding protein_coding MGP_WSBEiJ_T0072344.1 MGP_WSBEiJ_G0029120.1 mouse_genomes_project 5 116339443 116371454 + Fam222a protein_coding processed_transcript MGP_WSBEiJ_T0074491.1 MGP_WSBEiJ_G0029514.1 mouse_genomes_project 5 147941555 147949791 - MGP_WSBEiJ_P0074491 Aimp2 protein_coding protein_coding MGP_WSBEiJ_T0074492.1 MGP_WSBEiJ_G0029514.1 mouse_genomes_project 5 147941555 147949783 - MGP_WSBEiJ_P0074492 Aimp2 protein_coding protein_coding MGP_WSBEiJ_T0074493.1 MGP_WSBEiJ_G0029514.1 mouse_genomes_project 5 147944939 147949728 - Aimp2 protein_coding retained_intron MGP_WSBEiJ_T0074494.1 MGP_WSBEiJ_G0029514.1 mouse_genomes_project 5 147945224 147949732 - Aimp2 protein_coding retained_intron MGP_WSBEiJ_T0073697.1 MGP_WSBEiJ_G0029355.1 mouse_genomes_project 5 138620297 138622590 - MGP_WSBEiJ_P0073697 Fzd9 protein_coding protein_coding MGP_WSBEiJ_T0099582.1 MGP_WSBEiJ_G0038245.1 mouse_genomes_project 5 17419704 17419832 - Gm25761 snoRNA snoRNA MGP_WSBEiJ_T0099591.1 MGP_WSBEiJ_G0038254.1 mouse_genomes_project 5 55807630 55807758 - Gm23015 snoRNA snoRNA MGP_WSBEiJ_T0001624.1 MGP_WSBEiJ_G0001547.1 mouse_genomes_project 5 66991587 66993342 - TEC TEC MGP_WSBEiJ_T0074079.1 MGP_WSBEiJ_G0029426.1 mouse_genomes_project 5 141483358 141512008 - MGP_WSBEiJ_P0074079 Cyp3a13 protein_coding protein_coding MGP_WSBEiJ_T0098346.1 MGP_WSBEiJ_G0037009.1 mouse_genomes_project 5 68651249 68651356 - Gm23932 snRNA snRNA MGP_WSBEiJ_T0001610.1 MGP_WSBEiJ_G0001533.1 mouse_genomes_project 5 65526544 65527877 - TEC TEC MGP_WSBEiJ_T0001453.1 MGP_WSBEiJ_G0001379.1 mouse_genomes_project 5 29246038 29247426 + TEC TEC MGP_WSBEiJ_T0071008.1 MGP_WSBEiJ_G0028828.1 mouse_genomes_project 5 75650132 75662869 + Srd5a3 protein_coding retained_intron MGP_WSBEiJ_T0071009.1 MGP_WSBEiJ_G0028828.1 mouse_genomes_project 5 75650167 75650724 + Srd5a3 protein_coding processed_transcript MGP_WSBEiJ_T0071010.1 MGP_WSBEiJ_G0028828.1 mouse_genomes_project 5 75650189 75667521 + MGP_WSBEiJ_P0071010 Srd5a3 protein_coding protein_coding MGP_WSBEiJ_T0071011.1 MGP_WSBEiJ_G0028828.1 mouse_genomes_project 5 75650561 75661117 + MGP_WSBEiJ_P0071011 Srd5a3 protein_coding protein_coding MGP_WSBEiJ_T0071012.1 MGP_WSBEiJ_G0028828.1 mouse_genomes_project 5 75657976 75667290 + MGP_WSBEiJ_P0071012 Srd5a3 protein_coding protein_coding MGP_WSBEiJ_T0071013.1 MGP_WSBEiJ_G0028828.1 mouse_genomes_project 5 75664854 75667550 + Srd5a3 protein_coding retained_intron MGP_WSBEiJ_T0014618.1 MGP_WSBEiJ_G0012748.1 mouse_genomes_project 5 88242600 88242994 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070567.1 MGP_WSBEiJ_G0028755.1 mouse_genomes_project 5 63180811 63198634 + MGP_WSBEiJ_P0070567 Tbc1d1 protein_coding protein_coding MGP_WSBEiJ_T0070568.1 MGP_WSBEiJ_G0028755.1 mouse_genomes_project 5 63183945 63389377 + MGP_WSBEiJ_P0070568 Tbc1d1 protein_coding protein_coding MGP_WSBEiJ_T0070569.1 MGP_WSBEiJ_G0028755.1 mouse_genomes_project 5 63184314 63389377 + MGP_WSBEiJ_P0070569 Tbc1d1 protein_coding protein_coding MGP_WSBEiJ_T0070570.1 MGP_WSBEiJ_G0028755.1 mouse_genomes_project 5 63184705 63199375 + Tbc1d1 protein_coding retained_intron MGP_WSBEiJ_T0070571.1 MGP_WSBEiJ_G0028755.1 mouse_genomes_project 5 63184705 63389377 + MGP_WSBEiJ_P0070571 Tbc1d1 protein_coding protein_coding MGP_WSBEiJ_T0070572.1 MGP_WSBEiJ_G0028755.1 mouse_genomes_project 5 63260179 63389377 + MGP_WSBEiJ_P0070572 Tbc1d1 protein_coding protein_coding MGP_WSBEiJ_T0070573.1 MGP_WSBEiJ_G0028755.1 mouse_genomes_project 5 63307419 63316746 + MGP_WSBEiJ_P0070573 Tbc1d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070574.1 MGP_WSBEiJ_G0028755.1 mouse_genomes_project 5 63330516 63389373 + Tbc1d1 protein_coding processed_transcript MGP_WSBEiJ_T0069970.1 MGP_WSBEiJ_G0028654.1 mouse_genomes_project 5 32462368 32481171 - MGP_WSBEiJ_P0069970 Tnip2 protein_coding protein_coding MGP_WSBEiJ_T0069971.1 MGP_WSBEiJ_G0028654.1 mouse_genomes_project 5 32462368 32481143 - MGP_WSBEiJ_P0069971 Tnip2 protein_coding protein_coding MGP_WSBEiJ_T0069972.1 MGP_WSBEiJ_G0028654.1 mouse_genomes_project 5 32462411 32481118 - MGP_WSBEiJ_P0069972 Tnip2 protein_coding protein_coding MGP_WSBEiJ_T0069973.1 MGP_WSBEiJ_G0028654.1 mouse_genomes_project 5 32465885 32467896 - Tnip2 protein_coding retained_intron MGP_WSBEiJ_T0069974.1 MGP_WSBEiJ_G0028654.1 mouse_genomes_project 5 32467449 32481029 - Tnip2 protein_coding retained_intron MGP_WSBEiJ_T0069975.1 MGP_WSBEiJ_G0028654.1 mouse_genomes_project 5 32469563 32480840 - Tnip2 protein_coding retained_intron MGP_WSBEiJ_T0074888.1 MGP_WSBEiJ_G0029592.1 mouse_genomes_project 5 156308979 156317461 - MGP_WSBEiJ_P0074888 Rfc3 protein_coding protein_coding MGP_WSBEiJ_T0074889.1 MGP_WSBEiJ_G0029592.1 mouse_genomes_project 5 156309042 156310355 - Rfc3 protein_coding retained_intron MGP_WSBEiJ_T0074890.1 MGP_WSBEiJ_G0029592.1 mouse_genomes_project 5 156309044 156310986 - Rfc3 protein_coding retained_intron MGP_WSBEiJ_T0074891.1 MGP_WSBEiJ_G0029592.1 mouse_genomes_project 5 156309047 156317421 - Rfc3 protein_coding retained_intron MGP_WSBEiJ_T0074892.1 MGP_WSBEiJ_G0029592.1 mouse_genomes_project 5 156310639 156317427 - Rfc3 protein_coding retained_intron MGP_WSBEiJ_T0074893.1 MGP_WSBEiJ_G0029592.1 mouse_genomes_project 5 156313190 156317414 - Rfc3 protein_coding retained_intron MGP_WSBEiJ_T0074894.1 MGP_WSBEiJ_G0029592.1 mouse_genomes_project 5 156315790 156317446 - Rfc3 protein_coding retained_intron MGP_WSBEiJ_T0004547.1 MGP_WSBEiJ_G0003938.1 mouse_genomes_project 5 311601 319415 - Gm17590 antisense antisense MGP_WSBEiJ_T0004548.1 MGP_WSBEiJ_G0003938.1 mouse_genomes_project 5 311811 311919 - Gm17590 antisense antisense MGP_WSBEiJ_T0014546.1 MGP_WSBEiJ_G0012676.1 mouse_genomes_project 5 55962763 55963499 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072064.1 MGP_WSBEiJ_G0029067.1 mouse_genomes_project 5 111780816 111792214 + Lrcol1 protein_coding retained_intron MGP_WSBEiJ_T0072065.1 MGP_WSBEiJ_G0029067.1 mouse_genomes_project 5 111780816 111792214 + MGP_WSBEiJ_P0072065 Lrcol1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072066.1 MGP_WSBEiJ_G0029067.1 mouse_genomes_project 5 111780816 111792214 + MGP_WSBEiJ_P0072066 Lrcol1 protein_coding protein_coding MGP_WSBEiJ_T0072067.1 MGP_WSBEiJ_G0029067.1 mouse_genomes_project 5 111790298 111792287 + MGP_WSBEiJ_P0072067 Lrcol1 protein_coding protein_coding MGP_WSBEiJ_T0072068.1 MGP_WSBEiJ_G0029067.1 mouse_genomes_project 5 111790360 111792224 + MGP_WSBEiJ_P0072068 Lrcol1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071005.1 MGP_WSBEiJ_G0028827.1 mouse_genomes_project 5 75429422 75475718 - MGP_WSBEiJ_P0071005 Kdr protein_coding protein_coding MGP_WSBEiJ_T0071006.1 MGP_WSBEiJ_G0028827.1 mouse_genomes_project 5 75454676 75475718 - Kdr protein_coding retained_intron MGP_WSBEiJ_T0071007.1 MGP_WSBEiJ_G0028827.1 mouse_genomes_project 5 75458553 75475718 - Kdr protein_coding retained_intron MGP_WSBEiJ_T0008042.1 MGP_WSBEiJ_G0006561.1 mouse_genomes_project 5 74843343 74854837 - Gm42800 lincRNA lincRNA MGP_WSBEiJ_T0014617.1 MGP_WSBEiJ_G0012747.1 mouse_genomes_project 5 88214800 88215179 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074539.1 MGP_WSBEiJ_G0029524.1 mouse_genomes_project 5 148329744 148428480 - MGP_WSBEiJ_P0074539 Baiap2l1 protein_coding protein_coding MGP_WSBEiJ_T0074540.1 MGP_WSBEiJ_G0029524.1 mouse_genomes_project 5 148348424 148355327 - Baiap2l1 protein_coding processed_transcript MGP_WSBEiJ_T0072087.1 MGP_WSBEiJ_G0029071.1 mouse_genomes_project 5 112111291 112118337 + MGP_WSBEiJ_P0072087 Ddx51 protein_coding protein_coding MGP_WSBEiJ_T0072088.1 MGP_WSBEiJ_G0029071.1 mouse_genomes_project 5 112111386 112112986 + Ddx51 protein_coding retained_intron MGP_WSBEiJ_T0072089.1 MGP_WSBEiJ_G0029071.1 mouse_genomes_project 5 112112977 112113746 + Ddx51 protein_coding retained_intron MGP_WSBEiJ_T0072090.1 MGP_WSBEiJ_G0029071.1 mouse_genomes_project 5 112114475 112114951 + Ddx51 protein_coding retained_intron MGP_WSBEiJ_T0072091.1 MGP_WSBEiJ_G0029071.1 mouse_genomes_project 5 112114702 112115712 + MGP_WSBEiJ_P0072091 Ddx51 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008146.1 MGP_WSBEiJ_G0006638.1 mouse_genomes_project 5 112119228 112120835 + Gm42595 lincRNA lincRNA MGP_WSBEiJ_T0004693.1 MGP_WSBEiJ_G0004050.1 mouse_genomes_project 5 111767309 111769311 - Gm15792 antisense antisense MGP_WSBEiJ_T0073967.1 MGP_WSBEiJ_G0029406.1 mouse_genomes_project 5 141073055 141090481 + MGP_WSBEiJ_P0073967 protein_coding unknown_likely_coding MGP_WSBEiJ_T0073968.1 MGP_WSBEiJ_G0029406.1 mouse_genomes_project 5 141081109 141082938 + MGP_WSBEiJ_P0073968 protein_coding protein_coding MGP_WSBEiJ_T0073872.1 MGP_WSBEiJ_G0029386.1 mouse_genomes_project 5 140429277 140435196 + MGP_WSBEiJ_P0073872 Ift22 protein_coding protein_coding MGP_WSBEiJ_T0073873.1 MGP_WSBEiJ_G0029386.1 mouse_genomes_project 5 140429281 140434346 + MGP_WSBEiJ_P0073873 Ift22 protein_coding protein_coding MGP_WSBEiJ_T0073874.1 MGP_WSBEiJ_G0029386.1 mouse_genomes_project 5 140429311 140435197 + MGP_WSBEiJ_P0073874 Ift22 protein_coding protein_coding MGP_WSBEiJ_T0073875.1 MGP_WSBEiJ_G0029386.1 mouse_genomes_project 5 140433108 140433682 + Ift22 protein_coding retained_intron MGP_WSBEiJ_T0072328.1 MGP_WSBEiJ_G0029117.1 mouse_genomes_project 5 116128157 116168718 + MGP_WSBEiJ_P0072328 Ube3b protein_coding protein_coding MGP_WSBEiJ_T0072329.1 MGP_WSBEiJ_G0029117.1 mouse_genomes_project 5 116128376 116168717 + MGP_WSBEiJ_P0072329 Ube3b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072330.1 MGP_WSBEiJ_G0029117.1 mouse_genomes_project 5 116128383 116139711 + MGP_WSBEiJ_P0072330 Ube3b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072331.1 MGP_WSBEiJ_G0029117.1 mouse_genomes_project 5 116146335 116168717 + MGP_WSBEiJ_P0072331 Ube3b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072332.1 MGP_WSBEiJ_G0029117.1 mouse_genomes_project 5 116150276 116158687 + Ube3b protein_coding processed_transcript MGP_WSBEiJ_T0071852.1 MGP_WSBEiJ_G0029027.1 mouse_genomes_project 5 108652560 108698114 - MGP_WSBEiJ_P0071852 Glmn protein_coding protein_coding MGP_WSBEiJ_T0071853.1 MGP_WSBEiJ_G0029027.1 mouse_genomes_project 5 108652562 108698052 - MGP_WSBEiJ_P0071853 Glmn protein_coding protein_coding MGP_WSBEiJ_T0071854.1 MGP_WSBEiJ_G0029027.1 mouse_genomes_project 5 108652615 108656770 - Glmn protein_coding retained_intron MGP_WSBEiJ_T0071855.1 MGP_WSBEiJ_G0029027.1 mouse_genomes_project 5 108652616 108698362 - MGP_WSBEiJ_P0071855 Glmn protein_coding protein_coding MGP_WSBEiJ_T0071856.1 MGP_WSBEiJ_G0029027.1 mouse_genomes_project 5 108652617 108698019 - MGP_WSBEiJ_P0071856 Glmn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071857.1 MGP_WSBEiJ_G0029027.1 mouse_genomes_project 5 108678298 108698041 - Glmn protein_coding processed_transcript MGP_WSBEiJ_T0071858.1 MGP_WSBEiJ_G0029027.1 mouse_genomes_project 5 108681303 108698114 - Glmn protein_coding processed_transcript MGP_WSBEiJ_T0071859.1 MGP_WSBEiJ_G0029027.1 mouse_genomes_project 5 108681337 108698021 - MGP_WSBEiJ_P0071859 Glmn protein_coding protein_coding MGP_WSBEiJ_T0014648.1 MGP_WSBEiJ_G0012778.1 mouse_genomes_project 5 104484576 104485152 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071180.1 MGP_WSBEiJ_G0028859.1 mouse_genomes_project 5 86470749 86502862 - MGP_WSBEiJ_P0071180 Tmprss11g protein_coding protein_coding MGP_WSBEiJ_T0071181.1 MGP_WSBEiJ_G0028859.1 mouse_genomes_project 5 86471240 86502833 - MGP_WSBEiJ_P0071181 Tmprss11g protein_coding protein_coding MGP_WSBEiJ_T0071182.1 MGP_WSBEiJ_G0028859.1 mouse_genomes_project 5 86473228 86475513 - Tmprss11g protein_coding retained_intron MGP_WSBEiJ_T0001598.1 MGP_WSBEiJ_G0001521.1 mouse_genomes_project 5 64789229 64793553 - TEC TEC MGP_WSBEiJ_T0007914.1 MGP_WSBEiJ_G0006471.1 mouse_genomes_project 5 6245477 6247278 - Gm15734 lincRNA lincRNA MGP_WSBEiJ_T0074868.1 MGP_WSBEiJ_G0029588.1 mouse_genomes_project 5 155306722 155443738 + MGP_WSBEiJ_P0074868 Pds5b protein_coding protein_coding MGP_WSBEiJ_T0074869.1 MGP_WSBEiJ_G0029588.1 mouse_genomes_project 5 155306722 155444563 + MGP_WSBEiJ_P0074869 Pds5b protein_coding protein_coding MGP_WSBEiJ_T0074870.1 MGP_WSBEiJ_G0029588.1 mouse_genomes_project 5 155306810 155444540 + MGP_WSBEiJ_P0074870 Pds5b protein_coding protein_coding MGP_WSBEiJ_T0074871.1 MGP_WSBEiJ_G0029588.1 mouse_genomes_project 5 155381755 155382547 + Pds5b protein_coding retained_intron MGP_WSBEiJ_T0074872.1 MGP_WSBEiJ_G0029588.1 mouse_genomes_project 5 155390229 155431993 + MGP_WSBEiJ_P0074872 Pds5b protein_coding protein_coding MGP_WSBEiJ_T0074873.1 MGP_WSBEiJ_G0029588.1 mouse_genomes_project 5 155393241 155403932 + Pds5b protein_coding processed_transcript MGP_WSBEiJ_T0074874.1 MGP_WSBEiJ_G0029588.1 mouse_genomes_project 5 155428182 155434286 + Pds5b protein_coding processed_transcript MGP_WSBEiJ_T0074875.1 MGP_WSBEiJ_G0029588.1 mouse_genomes_project 5 155439105 155444353 + Pds5b protein_coding retained_intron MGP_WSBEiJ_T0074657.1 MGP_WSBEiJ_G0029552.1 mouse_genomes_project 5 150897393 150899402 - Gpr12 protein_coding retained_intron MGP_WSBEiJ_T0074658.1 MGP_WSBEiJ_G0029552.1 mouse_genomes_project 5 150897395 150900237 - MGP_WSBEiJ_P0074658 Gpr12 protein_coding protein_coding MGP_WSBEiJ_T0074659.1 MGP_WSBEiJ_G0029552.1 mouse_genomes_project 5 150897746 150899830 - MGP_WSBEiJ_P0074659 Gpr12 protein_coding protein_coding MGP_WSBEiJ_T0074660.1 MGP_WSBEiJ_G0029552.1 mouse_genomes_project 5 150898468 150899817 - MGP_WSBEiJ_P0074660 Gpr12 protein_coding protein_coding MGP_WSBEiJ_T0074661.1 MGP_WSBEiJ_G0029552.1 mouse_genomes_project 5 150898652 150899841 - MGP_WSBEiJ_P0074661 Gpr12 protein_coding protein_coding MGP_WSBEiJ_T0071556.1 MGP_WSBEiJ_G0028962.1 mouse_genomes_project 5 98951870 99443436 + MGP_WSBEiJ_P0071556 1700007G11Rik protein_coding protein_coding MGP_WSBEiJ_T0071557.1 MGP_WSBEiJ_G0028962.1 mouse_genomes_project 5 98951917 98969598 + 1700007G11Rik protein_coding processed_transcript MGP_WSBEiJ_T0071558.1 MGP_WSBEiJ_G0028962.1 mouse_genomes_project 5 98951922 98969993 + 1700007G11Rik protein_coding processed_transcript MGP_WSBEiJ_T0071559.1 MGP_WSBEiJ_G0028962.1 mouse_genomes_project 5 98951936 99443464 + MGP_WSBEiJ_P0071559 1700007G11Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001809.1 MGP_WSBEiJ_G0001730.1 mouse_genomes_project 5 134742804 134744117 - TEC TEC MGP_WSBEiJ_T0014453.1 MGP_WSBEiJ_G0012583.1 mouse_genomes_project 5 19276982 19277267 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068846.1 MGP_WSBEiJ_G0028463.1 mouse_genomes_project 5 1648900 1653097 - MGP_WSBEiJ_P0068846 Fzd1 protein_coding protein_coding MGP_WSBEiJ_T0071200.1 MGP_WSBEiJ_G0028865.1 mouse_genomes_project 5 86919935 86930399 - MGP_WSBEiJ_P0071200 Ugt2b1 protein_coding protein_coding MGP_WSBEiJ_T0072143.1 MGP_WSBEiJ_G0029080.1 mouse_genomes_project 5 113246462 113247113 + MGP_WSBEiJ_P0072143 Gm26897 protein_coding protein_coding MGP_WSBEiJ_T0008091.1 MGP_WSBEiJ_G0006602.1 mouse_genomes_project 5 100413786 100438486 - Gm43248 lincRNA lincRNA MGP_WSBEiJ_T0008092.1 MGP_WSBEiJ_G0006602.1 mouse_genomes_project 5 100425354 100438024 - Gm43248 lincRNA lincRNA MGP_WSBEiJ_T0069224.1 MGP_WSBEiJ_G0028528.1 mouse_genomes_project 5 21923270 21932943 - MGP_WSBEiJ_P0069224 Atg9b protein_coding protein_coding MGP_WSBEiJ_T0069225.1 MGP_WSBEiJ_G0028528.1 mouse_genomes_project 5 21923710 21929712 - Atg9b protein_coding processed_transcript MGP_WSBEiJ_T0069226.1 MGP_WSBEiJ_G0028528.1 mouse_genomes_project 5 21926195 21927057 - Atg9b protein_coding processed_transcript MGP_WSBEiJ_T0071176.1 MGP_WSBEiJ_G0028857.1 mouse_genomes_project 5 86280928 86307896 - MGP_WSBEiJ_P0071176 Tmprss11d protein_coding protein_coding MGP_WSBEiJ_T0071177.1 MGP_WSBEiJ_G0028857.1 mouse_genomes_project 5 86280928 86354312 - MGP_WSBEiJ_P0071177 Tmprss11d protein_coding protein_coding MGP_WSBEiJ_T0070833.1 MGP_WSBEiJ_G0028797.1 mouse_genomes_project 5 70909903 71375245 + MGP_WSBEiJ_P0070833 Gabrb1 protein_coding protein_coding MGP_WSBEiJ_T0070834.1 MGP_WSBEiJ_G0028797.1 mouse_genomes_project 5 70955373 71408359 + MGP_WSBEiJ_P0070834 Gabrb1 protein_coding protein_coding MGP_WSBEiJ_T0070816.1 MGP_WSBEiJ_G0028793.1 mouse_genomes_project 5 69988215 70079048 - MGP_WSBEiJ_P0070816 Gabrg1 protein_coding protein_coding MGP_WSBEiJ_T0070817.1 MGP_WSBEiJ_G0028793.1 mouse_genomes_project 5 69988943 70078635 - MGP_WSBEiJ_P0070817 Gabrg1 protein_coding protein_coding MGP_WSBEiJ_T0070818.1 MGP_WSBEiJ_G0028793.1 mouse_genomes_project 5 70005833 70078745 - Gabrg1 protein_coding retained_intron MGP_WSBEiJ_T0070819.1 MGP_WSBEiJ_G0028793.1 mouse_genomes_project 5 70049931 70078745 - Gabrg1 protein_coding retained_intron MGP_WSBEiJ_T0008249.1 MGP_WSBEiJ_G0006702.1 mouse_genomes_project 5 129630464 129648979 - Gm42953 lincRNA lincRNA MGP_WSBEiJ_T0001723.1 MGP_WSBEiJ_G0001645.1 mouse_genomes_project 5 114734506 114736402 - TEC TEC MGP_WSBEiJ_T0073427.1 MGP_WSBEiJ_G0029311.1 mouse_genomes_project 5 132909492 132921403 + MGP_WSBEiJ_P0073427 protein_coding protein_coding MGP_WSBEiJ_T0073428.1 MGP_WSBEiJ_G0029311.1 mouse_genomes_project 5 132909537 132913612 + protein_coding retained_intron MGP_WSBEiJ_T0001601.1 MGP_WSBEiJ_G0001524.1 mouse_genomes_project 5 64996973 64997887 + TEC TEC MGP_WSBEiJ_T0010514.1 MGP_WSBEiJ_G0008671.1 mouse_genomes_project 5 64028395 64028473 + Mir574 miRNA miRNA MGP_WSBEiJ_T0097412.1 MGP_WSBEiJ_G0036086.1 mouse_genomes_project 5 42934135 42941333 - Gm3364 sense_intronic sense_intronic MGP_WSBEiJ_T0008251.1 MGP_WSBEiJ_G0006704.1 mouse_genomes_project 5 129860327 129878001 + 4933438B17Rik lincRNA lincRNA MGP_WSBEiJ_T0008252.1 MGP_WSBEiJ_G0006704.1 mouse_genomes_project 5 129863761 129921515 + 4933438B17Rik lincRNA lincRNA MGP_WSBEiJ_T0008253.1 MGP_WSBEiJ_G0006704.1 mouse_genomes_project 5 129863768 129877856 + 4933438B17Rik lincRNA lincRNA MGP_WSBEiJ_T0014628.1 MGP_WSBEiJ_G0012758.1 mouse_genomes_project 5 92078181 92078556 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008273.1 MGP_WSBEiJ_G0006716.1 mouse_genomes_project 5 135704835 135709388 + Gm42626 lincRNA lincRNA MGP_WSBEiJ_T0010520.1 MGP_WSBEiJ_G0008677.1 mouse_genomes_project 5 76866985 76867077 + Mir5098 miRNA miRNA MGP_WSBEiJ_T0070300.1 MGP_WSBEiJ_G0028708.1 mouse_genomes_project 5 39968206 40026423 - MGP_WSBEiJ_P0070300 Bod1l protein_coding protein_coding MGP_WSBEiJ_T0070301.1 MGP_WSBEiJ_G0028708.1 mouse_genomes_project 5 39968206 40026423 - MGP_WSBEiJ_P0070301 Bod1l protein_coding protein_coding MGP_WSBEiJ_T0070302.1 MGP_WSBEiJ_G0028708.1 mouse_genomes_project 5 40003726 40006145 - Bod1l protein_coding processed_transcript MGP_WSBEiJ_T0070303.1 MGP_WSBEiJ_G0028708.1 mouse_genomes_project 5 40004618 40026400 - Bod1l protein_coding retained_intron MGP_WSBEiJ_T0073630.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138284965 138295746 + MGP_WSBEiJ_P0073630 Wbscr27 protein_coding protein_coding MGP_WSBEiJ_T0073631.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138284970 138294832 + MGP_WSBEiJ_P0073631 Wbscr27 protein_coding protein_coding MGP_WSBEiJ_T0073632.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138284970 138294832 + MGP_WSBEiJ_P0073632 Wbscr27 protein_coding protein_coding MGP_WSBEiJ_T0073633.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138284982 138294832 + MGP_WSBEiJ_P0073633 Wbscr27 protein_coding protein_coding MGP_WSBEiJ_T0073634.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138284989 138294311 + MGP_WSBEiJ_P0073634 Wbscr27 protein_coding protein_coding MGP_WSBEiJ_T0073635.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138285003 138287022 + MGP_WSBEiJ_P0073635 Wbscr27 protein_coding protein_coding MGP_WSBEiJ_T0073636.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138285121 138293743 + MGP_WSBEiJ_P0073636 Wbscr27 protein_coding protein_coding MGP_WSBEiJ_T0073637.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138285381 138289872 + Wbscr27 protein_coding processed_transcript MGP_WSBEiJ_T0073638.1 MGP_WSBEiJ_G0029343.1 mouse_genomes_project 5 138293570 138294341 + MGP_WSBEiJ_P0073638 Wbscr27 protein_coding protein_coding MGP_WSBEiJ_T0017600.1 MGP_WSBEiJ_G0015035.1 mouse_genomes_project 5 132836392 132851502 + processed_transcript processed_transcript MGP_WSBEiJ_T0017601.1 MGP_WSBEiJ_G0015035.1 mouse_genomes_project 5 132836833 132850951 + processed_transcript processed_transcript MGP_WSBEiJ_T0017602.1 MGP_WSBEiJ_G0015035.1 mouse_genomes_project 5 132839075 132842312 + processed_transcript retained_intron MGP_WSBEiJ_T0017603.1 MGP_WSBEiJ_G0015035.1 mouse_genomes_project 5 132844697 132850996 + processed_transcript processed_transcript MGP_WSBEiJ_T0017604.1 MGP_WSBEiJ_G0015035.1 mouse_genomes_project 5 132850100 132851113 + processed_transcript processed_transcript MGP_WSBEiJ_T0069821.1 MGP_WSBEiJ_G0028630.1 mouse_genomes_project 5 30992175 31054604 + MGP_WSBEiJ_P0069821 Slc5a1 protein_coding protein_coding MGP_WSBEiJ_T0011399.1 MGP_WSBEiJ_G0009556.1 mouse_genomes_project 5 101159295 101159369 + Gm27553 misc_RNA misc_RNA MGP_WSBEiJ_T0001460.1 MGP_WSBEiJ_G0001385.1 mouse_genomes_project 5 30311203 30313448 + TEC TEC MGP_WSBEiJ_T0007990.1 MGP_WSBEiJ_G0006518.1 mouse_genomes_project 5 41560786 41563945 + Gm43699 lincRNA lincRNA MGP_WSBEiJ_T0070068.1 MGP_WSBEiJ_G0028665.1 mouse_genomes_project 5 33069786 33083939 - MGP_WSBEiJ_P0070068 Lrpap1 protein_coding protein_coding MGP_WSBEiJ_T0070069.1 MGP_WSBEiJ_G0028665.1 mouse_genomes_project 5 33071354 33080687 - MGP_WSBEiJ_P0070069 Lrpap1 protein_coding protein_coding MGP_WSBEiJ_T0070070.1 MGP_WSBEiJ_G0028665.1 mouse_genomes_project 5 33071580 33083862 - Lrpap1 protein_coding retained_intron MGP_WSBEiJ_T0070071.1 MGP_WSBEiJ_G0028665.1 mouse_genomes_project 5 33080300 33083869 - Lrpap1 protein_coding retained_intron MGP_WSBEiJ_T0070072.1 MGP_WSBEiJ_G0028665.1 mouse_genomes_project 5 33080681 33082713 - Lrpap1 protein_coding processed_transcript MGP_WSBEiJ_T0074322.1 MGP_WSBEiJ_G0029476.1 mouse_genomes_project 5 144360228 144383502 + MGP_WSBEiJ_P0074322 Chst12 protein_coding protein_coding MGP_WSBEiJ_T0074323.1 MGP_WSBEiJ_G0029476.1 mouse_genomes_project 5 144360253 144381931 + MGP_WSBEiJ_P0074323 Chst12 protein_coding protein_coding MGP_WSBEiJ_T0074677.1 MGP_WSBEiJ_G0029557.1 mouse_genomes_project 5 151293389 151305561 - MGP_WSBEiJ_P0074677 Mtif3 protein_coding protein_coding MGP_WSBEiJ_T0074678.1 MGP_WSBEiJ_G0029557.1 mouse_genomes_project 5 151296337 151305563 - MGP_WSBEiJ_P0074678 Mtif3 protein_coding protein_coding MGP_WSBEiJ_T0074679.1 MGP_WSBEiJ_G0029557.1 mouse_genomes_project 5 151297184 151305573 - MGP_WSBEiJ_P0074679 Mtif3 protein_coding protein_coding MGP_WSBEiJ_T0074680.1 MGP_WSBEiJ_G0029557.1 mouse_genomes_project 5 151297184 151305525 - MGP_WSBEiJ_P0074680 Mtif3 protein_coding protein_coding MGP_WSBEiJ_T0074681.1 MGP_WSBEiJ_G0029557.1 mouse_genomes_project 5 151300705 151305519 - MGP_WSBEiJ_P0074681 Mtif3 protein_coding protein_coding MGP_WSBEiJ_T0074682.1 MGP_WSBEiJ_G0029557.1 mouse_genomes_project 5 151300716 151305576 - MGP_WSBEiJ_P0074682 Mtif3 protein_coding protein_coding MGP_WSBEiJ_T0001792.1 MGP_WSBEiJ_G0001713.1 mouse_genomes_project 5 131119395 131122339 - TEC TEC MGP_WSBEiJ_T0001831.1 MGP_WSBEiJ_G0001752.1 mouse_genomes_project 5 136654750 136655672 + TEC TEC MGP_WSBEiJ_T0069350.1 MGP_WSBEiJ_G0028551.1 mouse_genomes_project 5 23118311 23120272 + MGP_WSBEiJ_P0069350 Cct8l1 protein_coding protein_coding MGP_WSBEiJ_T0004577.1 MGP_WSBEiJ_G0003963.1 mouse_genomes_project 5 28889618 28891199 - Gm15469 antisense antisense MGP_WSBEiJ_T0014436.1 MGP_WSBEiJ_G0012566.1 mouse_genomes_project 5 13683146 13684164 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014569.1 MGP_WSBEiJ_G0012699.1 mouse_genomes_project 5 63215160 63216039 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070974.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74013391 74103174 - MGP_WSBEiJ_P0070974 Lnx1 protein_coding protein_coding MGP_WSBEiJ_T0070975.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74013391 74103175 - MGP_WSBEiJ_P0070975 Lnx1 protein_coding protein_coding MGP_WSBEiJ_T0070976.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74013391 74111050 - MGP_WSBEiJ_P0070976 Lnx1 protein_coding protein_coding MGP_WSBEiJ_T0070977.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74013623 74103160 - MGP_WSBEiJ_P0070977 Lnx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070979.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74018047 74102931 - MGP_WSBEiJ_P0070979 Lnx1 protein_coding protein_coding MGP_WSBEiJ_T0070980.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74018047 74103102 - MGP_WSBEiJ_P0070980 Lnx1 protein_coding protein_coding MGP_WSBEiJ_T0070981.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74018047 74103175 - MGP_WSBEiJ_P0070981 Lnx1 protein_coding protein_coding MGP_WSBEiJ_T0070982.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74018047 74128140 - MGP_WSBEiJ_P0070982 Lnx1 protein_coding protein_coding MGP_WSBEiJ_T0070983.1 MGP_WSBEiJ_G0028822.1 mouse_genomes_project 5 74018719 74046856 - MGP_WSBEiJ_P0070983 Lnx1 protein_coding protein_coding MGP_WSBEiJ_T0014741.1 MGP_WSBEiJ_G0012871.1 mouse_genomes_project 5 147183895 147184277 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098377.1 MGP_WSBEiJ_G0037040.1 mouse_genomes_project 5 114651974 114652083 + Gm22740 snRNA snRNA MGP_WSBEiJ_T0004762.1 MGP_WSBEiJ_G0004098.1 mouse_genomes_project 5 130095708 130113906 - Tmem132cos antisense antisense MGP_WSBEiJ_T0004763.1 MGP_WSBEiJ_G0004098.1 mouse_genomes_project 5 130095724 130113866 - Tmem132cos antisense antisense MGP_WSBEiJ_T0004764.1 MGP_WSBEiJ_G0004098.1 mouse_genomes_project 5 130095785 130113869 - Tmem132cos antisense antisense MGP_WSBEiJ_T0073209.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127183569 127207540 + MGP_WSBEiJ_P0073209 Kmt5a protein_coding protein_coding MGP_WSBEiJ_T0073210.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127183606 127206745 + MGP_WSBEiJ_P0073210 Kmt5a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073211.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127183624 127184895 + Kmt5a protein_coding retained_intron MGP_WSBEiJ_T0073212.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127189115 127206194 + MGP_WSBEiJ_P0073212 Kmt5a protein_coding protein_coding MGP_WSBEiJ_T0073213.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127189127 127206777 + Kmt5a protein_coding processed_transcript MGP_WSBEiJ_T0073214.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127189406 127194965 + Kmt5a protein_coding retained_intron MGP_WSBEiJ_T0073215.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127190326 127202352 + Kmt5a protein_coding processed_transcript MGP_WSBEiJ_T0073216.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127190584 127205865 + Kmt5a protein_coding processed_transcript MGP_WSBEiJ_T0073217.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127190627 127194430 + Kmt5a protein_coding processed_transcript MGP_WSBEiJ_T0073218.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127190820 127206022 + MGP_WSBEiJ_P0073218 Kmt5a protein_coding protein_coding MGP_WSBEiJ_T0073219.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127193816 127205026 + Kmt5a protein_coding processed_transcript MGP_WSBEiJ_T0073220.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127194029 127205177 + Kmt5a protein_coding retained_intron MGP_WSBEiJ_T0073221.1 MGP_WSBEiJ_G0029271.1 mouse_genomes_project 5 127194832 127206071 + Kmt5a protein_coding retained_intron MGP_WSBEiJ_T0008053.1 MGP_WSBEiJ_G0006570.1 mouse_genomes_project 5 76714387 76716169 - Gm42757 lincRNA lincRNA MGP_WSBEiJ_T0074375.1 MGP_WSBEiJ_G0029488.1 mouse_genomes_project 5 146460110 146528767 - Radil protein_coding retained_intron MGP_WSBEiJ_T0074376.1 MGP_WSBEiJ_G0029488.1 mouse_genomes_project 5 146460110 146522890 - MGP_WSBEiJ_P0074376 Radil protein_coding protein_coding MGP_WSBEiJ_T0074377.1 MGP_WSBEiJ_G0029488.1 mouse_genomes_project 5 146460147 146528782 - MGP_WSBEiJ_P0074377 Radil protein_coding protein_coding MGP_WSBEiJ_T0074378.1 MGP_WSBEiJ_G0029488.1 mouse_genomes_project 5 146460411 146528746 - MGP_WSBEiJ_P0074378 Radil protein_coding protein_coding MGP_WSBEiJ_T0074379.1 MGP_WSBEiJ_G0029488.1 mouse_genomes_project 5 146461751 146462838 - Radil protein_coding retained_intron MGP_WSBEiJ_T0074380.1 MGP_WSBEiJ_G0029488.1 mouse_genomes_project 5 146484100 146485475 - MGP_WSBEiJ_P0074380 Radil protein_coding protein_coding MGP_WSBEiJ_T0074382.1 MGP_WSBEiJ_G0029488.1 mouse_genomes_project 5 146521484 146528670 - MGP_WSBEiJ_P0074382 Radil protein_coding protein_coding MGP_WSBEiJ_T0070063.1 MGP_WSBEiJ_G0028664.1 mouse_genomes_project 5 33035219 33059246 + MGP_WSBEiJ_P0070063 Dok7 protein_coding protein_coding MGP_WSBEiJ_T0070064.1 MGP_WSBEiJ_G0028664.1 mouse_genomes_project 5 33035315 33059246 + MGP_WSBEiJ_P0070064 Dok7 protein_coding protein_coding MGP_WSBEiJ_T0070065.1 MGP_WSBEiJ_G0028664.1 mouse_genomes_project 5 33035341 33044006 + MGP_WSBEiJ_P0070065 Dok7 protein_coding protein_coding MGP_WSBEiJ_T0070066.1 MGP_WSBEiJ_G0028664.1 mouse_genomes_project 5 33035530 33066121 + MGP_WSBEiJ_P0070066 Dok7 protein_coding protein_coding MGP_WSBEiJ_T0070067.1 MGP_WSBEiJ_G0028664.1 mouse_genomes_project 5 33053239 33059246 + Dok7 protein_coding retained_intron MGP_WSBEiJ_T0001661.1 MGP_WSBEiJ_G0001583.1 mouse_genomes_project 5 75807043 75811219 - TEC TEC MGP_WSBEiJ_T0008263.1 MGP_WSBEiJ_G0006712.1 mouse_genomes_project 5 131483977 131507806 - 5930412G12Rik lincRNA lincRNA MGP_WSBEiJ_T0008264.1 MGP_WSBEiJ_G0006712.1 mouse_genomes_project 5 131483977 131491791 - 5930412G12Rik lincRNA lincRNA MGP_WSBEiJ_T0008265.1 MGP_WSBEiJ_G0006712.1 mouse_genomes_project 5 131483999 131507806 - 5930412G12Rik lincRNA lincRNA MGP_WSBEiJ_T0008266.1 MGP_WSBEiJ_G0006712.1 mouse_genomes_project 5 131484049 131491791 - 5930412G12Rik lincRNA lincRNA MGP_WSBEiJ_T0008267.1 MGP_WSBEiJ_G0006712.1 mouse_genomes_project 5 131489491 131507812 - 5930412G12Rik lincRNA lincRNA MGP_WSBEiJ_T0008268.1 MGP_WSBEiJ_G0006712.1 mouse_genomes_project 5 131490602 131507773 - 5930412G12Rik lincRNA lincRNA MGP_WSBEiJ_T0014475.1 MGP_WSBEiJ_G0012605.1 mouse_genomes_project 5 23134594 23134868 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008304.1 MGP_WSBEiJ_G0006741.1 mouse_genomes_project 5 150482393 150488559 - B230303O12Rik lincRNA lincRNA MGP_WSBEiJ_T0008065.1 MGP_WSBEiJ_G0006579.1 mouse_genomes_project 5 88031047 88036404 + BC037156 lincRNA lincRNA MGP_WSBEiJ_T0004747.1 MGP_WSBEiJ_G0004089.1 mouse_genomes_project 5 125952590 125965859 - Gm15860 antisense antisense MGP_WSBEiJ_T0004748.1 MGP_WSBEiJ_G0004089.1 mouse_genomes_project 5 125954123 125965961 - Gm15860 antisense antisense MGP_WSBEiJ_T0004749.1 MGP_WSBEiJ_G0004089.1 mouse_genomes_project 5 125954259 125963423 - Gm15860 antisense antisense MGP_WSBEiJ_T0001840.1 MGP_WSBEiJ_G0001760.1 mouse_genomes_project 5 138635102 138635907 + TEC TEC MGP_WSBEiJ_T0001829.1 MGP_WSBEiJ_G0001750.1 mouse_genomes_project 5 135690992 135691816 - TEC TEC MGP_WSBEiJ_T0014464.1 MGP_WSBEiJ_G0012594.1 mouse_genomes_project 5 20336015 20336623 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001485.1 MGP_WSBEiJ_G0001410.1 mouse_genomes_project 5 41698067 41702332 + TEC TEC MGP_WSBEiJ_T0097437.1 MGP_WSBEiJ_G0036107.1 mouse_genomes_project 5 154609585 154609850 + Gm42558 sense_intronic sense_intronic MGP_WSBEiJ_T0074767.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153561992 153566111 - MGP_WSBEiJ_P0074767 Hmgb1 protein_coding protein_coding MGP_WSBEiJ_T0074768.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153562370 153566455 - MGP_WSBEiJ_P0074768 Hmgb1 protein_coding protein_coding MGP_WSBEiJ_T0074769.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153562370 153712840 - MGP_WSBEiJ_P0074769 Hmgb1 protein_coding protein_coding MGP_WSBEiJ_T0074770.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153562687 153565254 - Hmgb1 protein_coding retained_intron MGP_WSBEiJ_T0074771.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153562935 153567852 - MGP_WSBEiJ_P0074771 Hmgb1 protein_coding protein_coding MGP_WSBEiJ_T0074772.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153564630 153567219 - MGP_WSBEiJ_P0074772 Hmgb1 protein_coding protein_coding MGP_WSBEiJ_T0074773.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153564874 153567857 - Hmgb1 protein_coding retained_intron MGP_WSBEiJ_T0074774.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153565121 153568353 - MGP_WSBEiJ_P0074774 Hmgb1 protein_coding protein_coding MGP_WSBEiJ_T0074775.1 MGP_WSBEiJ_G0029574.1 mouse_genomes_project 5 153565179 153567822 - Hmgb1 protein_coding retained_intron MGP_WSBEiJ_T0099617.1 MGP_WSBEiJ_G0038280.1 mouse_genomes_project 5 109023779 109023911 + Gm26387 snoRNA snoRNA MGP_WSBEiJ_T0074470.1 MGP_WSBEiJ_G0029508.1 mouse_genomes_project 5 147564279 147586210 - MGP_WSBEiJ_P0074470 Rac1 protein_coding protein_coding MGP_WSBEiJ_T0074471.1 MGP_WSBEiJ_G0029508.1 mouse_genomes_project 5 147564631 147576604 - Rac1 protein_coding processed_transcript MGP_WSBEiJ_T0074472.1 MGP_WSBEiJ_G0029508.1 mouse_genomes_project 5 147573078 147576030 - Rac1 protein_coding processed_transcript MGP_WSBEiJ_T0072975.1 MGP_WSBEiJ_G0029236.1 mouse_genomes_project 5 125444317 125467772 + MGP_WSBEiJ_P0072975 Rnf34 protein_coding protein_coding MGP_WSBEiJ_T0072976.1 MGP_WSBEiJ_G0029236.1 mouse_genomes_project 5 125444426 125460329 + MGP_WSBEiJ_P0072976 Rnf34 protein_coding protein_coding MGP_WSBEiJ_T0072081.1 MGP_WSBEiJ_G0029070.1 mouse_genomes_project 5 112105891 112111258 - MGP_WSBEiJ_P0072081 Noc4l protein_coding protein_coding MGP_WSBEiJ_T0072082.1 MGP_WSBEiJ_G0029070.1 mouse_genomes_project 5 112106320 112107491 - Noc4l protein_coding retained_intron MGP_WSBEiJ_T0072083.1 MGP_WSBEiJ_G0029070.1 mouse_genomes_project 5 112108543 112111097 - Noc4l protein_coding retained_intron MGP_WSBEiJ_T0072084.1 MGP_WSBEiJ_G0029070.1 mouse_genomes_project 5 112108717 112111189 - Noc4l protein_coding retained_intron MGP_WSBEiJ_T0072085.1 MGP_WSBEiJ_G0029070.1 mouse_genomes_project 5 112108837 112111207 - Noc4l protein_coding retained_intron MGP_WSBEiJ_T0072086.1 MGP_WSBEiJ_G0029070.1 mouse_genomes_project 5 112110842 112111221 - Noc4l protein_coding retained_intron MGP_WSBEiJ_T0072997.1 MGP_WSBEiJ_G0029238.1 mouse_genomes_project 5 125620708 125636295 + MGP_WSBEiJ_P0072997 Orai1 protein_coding protein_coding MGP_WSBEiJ_T0072998.1 MGP_WSBEiJ_G0029238.1 mouse_genomes_project 5 125620708 125636595 + MGP_WSBEiJ_P0072998 Orai1 protein_coding protein_coding MGP_WSBEiJ_T0072999.1 MGP_WSBEiJ_G0029238.1 mouse_genomes_project 5 125620972 125635629 + Orai1 protein_coding processed_transcript MGP_WSBEiJ_T0001556.1 MGP_WSBEiJ_G0001480.1 mouse_genomes_project 5 50947023 50949474 - TEC TEC MGP_WSBEiJ_T0008221.1 MGP_WSBEiJ_G0006689.1 mouse_genomes_project 5 125746887 125751104 + Gm38102 lincRNA lincRNA MGP_WSBEiJ_T0008225.1 MGP_WSBEiJ_G0006689.1 mouse_genomes_project 5 125750932 125752870 + Gm38102 lincRNA lincRNA MGP_WSBEiJ_T0001412.1 MGP_WSBEiJ_G0001340.1 mouse_genomes_project 5 10540496 10543206 + TEC TEC MGP_WSBEiJ_T0069335.1 MGP_WSBEiJ_G0028548.1 mouse_genomes_project 5 22820556 22824565 + Galnt11 protein_coding processed_transcript MGP_WSBEiJ_T0069337.1 MGP_WSBEiJ_G0028548.1 mouse_genomes_project 5 22821534 22855970 + MGP_WSBEiJ_P0069337 Galnt11 protein_coding protein_coding MGP_WSBEiJ_T0069338.1 MGP_WSBEiJ_G0028548.1 mouse_genomes_project 5 22836577 22855969 + MGP_WSBEiJ_P0069338 Galnt11 protein_coding protein_coding MGP_WSBEiJ_T0069339.1 MGP_WSBEiJ_G0028548.1 mouse_genomes_project 5 22836987 22838969 + MGP_WSBEiJ_P0069339 Galnt11 protein_coding protein_coding MGP_WSBEiJ_T0069340.1 MGP_WSBEiJ_G0028548.1 mouse_genomes_project 5 22837567 22855970 + MGP_WSBEiJ_P0069340 Galnt11 protein_coding protein_coding MGP_WSBEiJ_T0008016.1 MGP_WSBEiJ_G0006542.1 mouse_genomes_project 5 63472942 63513671 + Gm31363 lincRNA lincRNA MGP_WSBEiJ_T0072873.1 MGP_WSBEiJ_G0029221.1 mouse_genomes_project 5 124750802 124781400 + MGP_WSBEiJ_P0072873 Hvcn1 protein_coding protein_coding MGP_WSBEiJ_T0072874.1 MGP_WSBEiJ_G0029221.1 mouse_genomes_project 5 124753734 124792283 + MGP_WSBEiJ_P0072874 Hvcn1 protein_coding protein_coding MGP_WSBEiJ_T0072875.1 MGP_WSBEiJ_G0029221.1 mouse_genomes_project 5 124753914 124787496 + MGP_WSBEiJ_P0072875 Hvcn1 protein_coding protein_coding MGP_WSBEiJ_T0072876.1 MGP_WSBEiJ_G0029221.1 mouse_genomes_project 5 124754125 124786810 + MGP_WSBEiJ_P0072876 Hvcn1 protein_coding protein_coding MGP_WSBEiJ_T0072877.1 MGP_WSBEiJ_G0029221.1 mouse_genomes_project 5 124754146 124792283 + MGP_WSBEiJ_P0072877 Hvcn1 protein_coding protein_coding MGP_WSBEiJ_T0074673.1 MGP_WSBEiJ_G0029556.1 mouse_genomes_project 5 151290489 151297432 + MGP_WSBEiJ_P0074673 Gtf3a protein_coding protein_coding MGP_WSBEiJ_T0074674.1 MGP_WSBEiJ_G0029556.1 mouse_genomes_project 5 151290530 151297421 + Gtf3a protein_coding retained_intron MGP_WSBEiJ_T0074675.1 MGP_WSBEiJ_G0029556.1 mouse_genomes_project 5 151290537 151297424 + MGP_WSBEiJ_P0074675 Gtf3a protein_coding protein_coding MGP_WSBEiJ_T0074676.1 MGP_WSBEiJ_G0029556.1 mouse_genomes_project 5 151291824 151297421 + Gtf3a protein_coding retained_intron MGP_WSBEiJ_T0070260.1 MGP_WSBEiJ_G0028700.1 mouse_genomes_project 5 36403545 36406694 + MGP_WSBEiJ_P0070260 Drd5 protein_coding protein_coding MGP_WSBEiJ_T0098370.1 MGP_WSBEiJ_G0037033.1 mouse_genomes_project 5 104514679 104514850 + Gm25721 snRNA snRNA MGP_WSBEiJ_T0001431.1 MGP_WSBEiJ_G0001359.1 mouse_genomes_project 5 18470410 18471354 + TEC TEC MGP_WSBEiJ_T0001639.1 MGP_WSBEiJ_G0001562.1 mouse_genomes_project 5 71865983 71868534 - TEC TEC MGP_WSBEiJ_T0100102.1 MGP_WSBEiJ_G0038706.1 mouse_genomes_project 5 49013571 49016365 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0014485.1 MGP_WSBEiJ_G0012615.1 mouse_genomes_project 5 25676671 25677981 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098394.1 MGP_WSBEiJ_G0037057.1 mouse_genomes_project 5 145489894 145490001 - Gm24131 snRNA snRNA MGP_WSBEiJ_T0069839.1 MGP_WSBEiJ_G0028633.1 mouse_genomes_project 5 31231445 31269349 + MGP_WSBEiJ_P0069839 Maea protein_coding protein_coding MGP_WSBEiJ_T0069840.1 MGP_WSBEiJ_G0028633.1 mouse_genomes_project 5 31231497 31258714 + MGP_WSBEiJ_P0069840 Maea protein_coding protein_coding MGP_WSBEiJ_T0069841.1 MGP_WSBEiJ_G0028633.1 mouse_genomes_project 5 31231501 31256389 + MGP_WSBEiJ_P0069841 Maea protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069842.1 MGP_WSBEiJ_G0028633.1 mouse_genomes_project 5 31232121 31256440 + MGP_WSBEiJ_P0069842 Maea protein_coding protein_coding MGP_WSBEiJ_T0069843.1 MGP_WSBEiJ_G0028633.1 mouse_genomes_project 5 31258589 31267837 + Maea protein_coding retained_intron MGP_WSBEiJ_T0069844.1 MGP_WSBEiJ_G0028633.1 mouse_genomes_project 5 31267612 31268601 + Maea protein_coding retained_intron MGP_WSBEiJ_T0004770.1 MGP_WSBEiJ_G0004104.1 mouse_genomes_project 5 137751894 137753935 + Gm42882 antisense antisense MGP_WSBEiJ_T0001440.1 MGP_WSBEiJ_G0001367.1 mouse_genomes_project 5 23304215 23306240 - TEC TEC MGP_WSBEiJ_T0014540.1 MGP_WSBEiJ_G0012670.1 mouse_genomes_project 5 53549663 53550492 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008187.1 MGP_WSBEiJ_G0006661.1 mouse_genomes_project 5 117530757 117531525 - 1110006O24Rik lincRNA lincRNA MGP_WSBEiJ_T0001561.1 MGP_WSBEiJ_G0001485.1 mouse_genomes_project 5 54372801 54378274 - TEC TEC MGP_WSBEiJ_T0069940.1 MGP_WSBEiJ_G0028649.1 mouse_genomes_project 5 32119796 32121250 - Mxd4 protein_coding processed_transcript MGP_WSBEiJ_T0069941.1 MGP_WSBEiJ_G0028649.1 mouse_genomes_project 5 32119800 32134079 - MGP_WSBEiJ_P0069941 Mxd4 protein_coding protein_coding MGP_WSBEiJ_T0069942.1 MGP_WSBEiJ_G0028649.1 mouse_genomes_project 5 32122948 32134089 - MGP_WSBEiJ_P0069942 Mxd4 protein_coding protein_coding MGP_WSBEiJ_T0069943.1 MGP_WSBEiJ_G0028649.1 mouse_genomes_project 5 32126114 32130742 - Mxd4 protein_coding retained_intron MGP_WSBEiJ_T0004800.1 MGP_WSBEiJ_G0004126.1 mouse_genomes_project 5 147370392 147373850 + 0610040B10Rik antisense antisense MGP_WSBEiJ_T0004801.1 MGP_WSBEiJ_G0004126.1 mouse_genomes_project 5 147370453 147372096 + 0610040B10Rik antisense antisense MGP_WSBEiJ_T0004802.1 MGP_WSBEiJ_G0004126.1 mouse_genomes_project 5 147370472 147373847 + 0610040B10Rik antisense antisense MGP_WSBEiJ_T0014456.1 MGP_WSBEiJ_G0012586.1 mouse_genomes_project 5 19680224 19680606 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072694.1 MGP_WSBEiJ_G0029188.1 mouse_genomes_project 5 122867428 122883250 + MGP_WSBEiJ_P0072694 Ddx54 protein_coding protein_coding MGP_WSBEiJ_T0072695.1 MGP_WSBEiJ_G0029188.1 mouse_genomes_project 5 122867816 122882287 + Ddx54 protein_coding retained_intron MGP_WSBEiJ_T0072696.1 MGP_WSBEiJ_G0029188.1 mouse_genomes_project 5 122873567 122876462 + Ddx54 protein_coding retained_intron MGP_WSBEiJ_T0072697.1 MGP_WSBEiJ_G0029188.1 mouse_genomes_project 5 122875990 122876461 + Ddx54 protein_coding retained_intron MGP_WSBEiJ_T0074271.1 MGP_WSBEiJ_G0029463.1 mouse_genomes_project 5 143305493 143311874 + MGP_WSBEiJ_P0074271 Uncx protein_coding protein_coding MGP_WSBEiJ_T0074272.1 MGP_WSBEiJ_G0029463.1 mouse_genomes_project 5 143305897 143307268 + MGP_WSBEiJ_P0074272 Uncx protein_coding protein_coding MGP_WSBEiJ_T0001631.1 MGP_WSBEiJ_G0001554.1 mouse_genomes_project 5 68429035 68430066 - TEC TEC MGP_WSBEiJ_T0071024.1 MGP_WSBEiJ_G0028831.1 mouse_genomes_project 5 75821518 75842037 - MGP_WSBEiJ_P0071024 Pdcl2 protein_coding protein_coding MGP_WSBEiJ_T0071025.1 MGP_WSBEiJ_G0028831.1 mouse_genomes_project 5 75821530 75842060 - MGP_WSBEiJ_P0071025 Pdcl2 protein_coding protein_coding MGP_WSBEiJ_T0014417.1 MGP_WSBEiJ_G0012547.1 mouse_genomes_project 5 4257538 4258124 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072938.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125284472 125309793 + MGP_WSBEiJ_P0072938 P2rx4 protein_coding protein_coding MGP_WSBEiJ_T0072939.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125284491 125308368 + MGP_WSBEiJ_P0072939 P2rx4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072940.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125284497 125288801 + P2rx4 protein_coding retained_intron MGP_WSBEiJ_T0072941.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125284498 125298206 + P2rx4 protein_coding retained_intron MGP_WSBEiJ_T0072942.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125284508 125305378 + MGP_WSBEiJ_P0072942 P2rx4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072943.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125284512 125309099 + MGP_WSBEiJ_P0072943 P2rx4 protein_coding protein_coding MGP_WSBEiJ_T0072944.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125284582 125308378 + MGP_WSBEiJ_P0072944 P2rx4 protein_coding protein_coding MGP_WSBEiJ_T0072945.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125284582 125308378 + MGP_WSBEiJ_P0072945 P2rx4 protein_coding protein_coding MGP_WSBEiJ_T0072946.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125303308 125305277 + P2rx4 protein_coding retained_intron MGP_WSBEiJ_T0072947.1 MGP_WSBEiJ_G0029233.1 mouse_genomes_project 5 125307718 125308640 + P2rx4 protein_coding processed_transcript MGP_WSBEiJ_T0001860.1 MGP_WSBEiJ_G0001780.1 mouse_genomes_project 5 149454168 149456201 + TEC TEC MGP_WSBEiJ_T0069590.1 MGP_WSBEiJ_G0028597.1 mouse_genomes_project 5 28837015 28844248 - MGP_WSBEiJ_P0069590 Slc30a3 protein_coding protein_coding MGP_WSBEiJ_T0069591.1 MGP_WSBEiJ_G0028597.1 mouse_genomes_project 5 28838300 28839249 - MGP_WSBEiJ_P0069591 Slc30a3 protein_coding protein_coding MGP_WSBEiJ_T0069592.1 MGP_WSBEiJ_G0028597.1 mouse_genomes_project 5 28839674 28844360 - MGP_WSBEiJ_P0069592 Slc30a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069593.1 MGP_WSBEiJ_G0028597.1 mouse_genomes_project 5 28840231 28845651 - MGP_WSBEiJ_P0069593 Slc30a3 protein_coding protein_coding MGP_WSBEiJ_T0069594.1 MGP_WSBEiJ_G0028597.1 mouse_genomes_project 5 28840267 28860542 - MGP_WSBEiJ_P0069594 Slc30a3 protein_coding protein_coding MGP_WSBEiJ_T0010510.1 MGP_WSBEiJ_G0008667.1 mouse_genomes_project 5 50516092 50516208 - Mir6417 miRNA miRNA MGP_WSBEiJ_T0069080.1 MGP_WSBEiJ_G0028499.1 mouse_genomes_project 5 18197096 18201777 + MGP_WSBEiJ_P0069080 Tmem60 protein_coding protein_coding MGP_WSBEiJ_T0069081.1 MGP_WSBEiJ_G0028499.1 mouse_genomes_project 5 18197413 18199591 + Tmem60 protein_coding processed_transcript MGP_WSBEiJ_T0010506.1 MGP_WSBEiJ_G0008663.1 mouse_genomes_project 5 34335557 34335616 + Mir7689 miRNA miRNA MGP_WSBEiJ_T0008312.1 MGP_WSBEiJ_G0006749.1 mouse_genomes_project 5 152385397 152393750 - Gm15721 lincRNA lincRNA MGP_WSBEiJ_T0072130.1 MGP_WSBEiJ_G0029077.1 mouse_genomes_project 5 112353136 112777185 + MGP_WSBEiJ_P0072130 Ttc28 protein_coding protein_coding MGP_WSBEiJ_T0072131.1 MGP_WSBEiJ_G0029077.1 mouse_genomes_project 5 112353136 112777184 + MGP_WSBEiJ_P0072131 Ttc28 protein_coding protein_coding MGP_WSBEiJ_T0072132.1 MGP_WSBEiJ_G0029077.1 mouse_genomes_project 5 112353155 112393552 + Ttc28 protein_coding processed_transcript MGP_WSBEiJ_T0072133.1 MGP_WSBEiJ_G0029077.1 mouse_genomes_project 5 112709469 112714322 + Ttc28 protein_coding retained_intron MGP_WSBEiJ_T0072134.1 MGP_WSBEiJ_G0029077.1 mouse_genomes_project 5 112718324 112723731 + Ttc28 protein_coding processed_transcript MGP_WSBEiJ_T0072135.1 MGP_WSBEiJ_G0029077.1 mouse_genomes_project 5 112720581 112754066 + Ttc28 protein_coding retained_intron MGP_WSBEiJ_T0001674.1 MGP_WSBEiJ_G0001596.1 mouse_genomes_project 5 93525010 93527147 + TEC TEC MGP_WSBEiJ_T0069431.1 MGP_WSBEiJ_G0028570.1 mouse_genomes_project 5 27807249 27822276 - MGP_WSBEiJ_P0069431 protein_coding unknown_likely_coding MGP_WSBEiJ_T0069432.1 MGP_WSBEiJ_G0028570.1 mouse_genomes_project 5 27807317 27822343 - protein_coding retained_intron MGP_WSBEiJ_T0069433.1 MGP_WSBEiJ_G0028570.1 mouse_genomes_project 5 27807384 27822298 - MGP_WSBEiJ_P0069433 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069434.1 MGP_WSBEiJ_G0028570.1 mouse_genomes_project 5 27808233 27822310 - MGP_WSBEiJ_P0069434 protein_coding protein_coding MGP_WSBEiJ_T0069435.1 MGP_WSBEiJ_G0028570.1 mouse_genomes_project 5 27811971 27822281 - MGP_WSBEiJ_P0069435 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069436.1 MGP_WSBEiJ_G0028570.1 mouse_genomes_project 5 27812581 27822315 - protein_coding retained_intron MGP_WSBEiJ_T0069437.1 MGP_WSBEiJ_G0028570.1 mouse_genomes_project 5 27812838 27822305 - MGP_WSBEiJ_P0069437 protein_coding protein_coding MGP_WSBEiJ_T0069438.1 MGP_WSBEiJ_G0028570.1 mouse_genomes_project 5 27816626 27822251 - protein_coding processed_transcript MGP_WSBEiJ_T0099620.1 MGP_WSBEiJ_G0038283.1 mouse_genomes_project 5 120353560 120353692 + Gm25076 snoRNA snoRNA MGP_WSBEiJ_T0068825.1 MGP_WSBEiJ_G0028460.1 mouse_genomes_project 5 750245 751640 - MGP_WSBEiJ_P0068825 protein_coding protein_coding MGP_WSBEiJ_T0014752.1 MGP_WSBEiJ_G0012882.1 mouse_genomes_project 5 150128957 150129280 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070890.1 MGP_WSBEiJ_G0028809.1 mouse_genomes_project 5 72316444 72325304 - MGP_WSBEiJ_P0070890 Gm10135 protein_coding protein_coding MGP_WSBEiJ_T0068842.1 MGP_WSBEiJ_G0028462.1 mouse_genomes_project 5 940010 965845 - MGP_WSBEiJ_P0068842 Cyp51 protein_coding protein_coding MGP_WSBEiJ_T0068843.1 MGP_WSBEiJ_G0028462.1 mouse_genomes_project 5 942132 965442 - Cyp51 protein_coding processed_transcript MGP_WSBEiJ_T0068844.1 MGP_WSBEiJ_G0028462.1 mouse_genomes_project 5 960374 964480 - Cyp51 protein_coding retained_intron MGP_WSBEiJ_T0068845.1 MGP_WSBEiJ_G0028462.1 mouse_genomes_project 5 962147 965520 - Cyp51 protein_coding retained_intron MGP_WSBEiJ_T0008258.1 MGP_WSBEiJ_G0006708.1 mouse_genomes_project 5 130437767 130439121 + Gm42980 lincRNA lincRNA MGP_WSBEiJ_T0070909.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72663775 72684698 + MGP_WSBEiJ_P0070909 Ociad1 protein_coding protein_coding MGP_WSBEiJ_T0070910.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72663783 72684810 + MGP_WSBEiJ_P0070910 Ociad1 protein_coding protein_coding MGP_WSBEiJ_T0070911.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72663784 72680337 + MGP_WSBEiJ_P0070911 Ociad1 protein_coding protein_coding MGP_WSBEiJ_T0070912.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72663798 72677752 + MGP_WSBEiJ_P0070912 Ociad1 protein_coding protein_coding MGP_WSBEiJ_T0070913.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72663823 72684655 + MGP_WSBEiJ_P0070913 Ociad1 protein_coding protein_coding MGP_WSBEiJ_T0070914.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72663832 72681388 + MGP_WSBEiJ_P0070914 Ociad1 protein_coding protein_coding MGP_WSBEiJ_T0070915.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72663886 72684682 + MGP_WSBEiJ_P0070915 Ociad1 protein_coding protein_coding MGP_WSBEiJ_T0070916.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72664044 72665958 + MGP_WSBEiJ_P0070916 Ociad1 protein_coding protein_coding MGP_WSBEiJ_T0070917.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72665981 72684682 + MGP_WSBEiJ_P0070917 Ociad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070918.1 MGP_WSBEiJ_G0028811.1 mouse_genomes_project 5 72675093 72676126 + Ociad1 protein_coding retained_intron MGP_WSBEiJ_T0100282.1 MGP_WSBEiJ_G0038797.1 mouse_genomes_project 5 30395707 30402437 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100283.1 MGP_WSBEiJ_G0038797.1 mouse_genomes_project 5 30395711 30402493 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0071826.1 MGP_WSBEiJ_G0029019.1 mouse_genomes_project 5 108184355 108379071 - MGP_WSBEiJ_P0071826 Tgfbr3 protein_coding protein_coding MGP_WSBEiJ_T0071827.1 MGP_WSBEiJ_G0029019.1 mouse_genomes_project 5 108188133 108278454 - Tgfbr3 protein_coding processed_transcript MGP_WSBEiJ_T0071828.1 MGP_WSBEiJ_G0029019.1 mouse_genomes_project 5 108198537 108214168 - MGP_WSBEiJ_P0071828 Tgfbr3 protein_coding protein_coding MGP_WSBEiJ_T0071829.1 MGP_WSBEiJ_G0029019.1 mouse_genomes_project 5 108229132 108379037 - Tgfbr3 protein_coding retained_intron MGP_WSBEiJ_T0004780.1 MGP_WSBEiJ_G0004112.1 mouse_genomes_project 5 139561617 139563450 - Gm15701 antisense antisense MGP_WSBEiJ_T0001586.1 MGP_WSBEiJ_G0001509.1 mouse_genomes_project 5 63868489 63870210 + TEC TEC MGP_WSBEiJ_T0014527.1 MGP_WSBEiJ_G0012657.1 mouse_genomes_project 5 46020997 46021445 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010536.1 MGP_WSBEiJ_G0008693.1 mouse_genomes_project 5 116504443 116504507 + Mir7028 miRNA miRNA MGP_WSBEiJ_T0074578.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149256349 149273627 + MGP_WSBEiJ_P0074578 Arpc1b protein_coding protein_coding MGP_WSBEiJ_T0074579.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149256392 149266742 + Arpc1b protein_coding processed_transcript MGP_WSBEiJ_T0074580.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149256435 149268202 + Arpc1b protein_coding retained_intron MGP_WSBEiJ_T0074581.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149256446 149272015 + MGP_WSBEiJ_P0074581 Arpc1b protein_coding protein_coding MGP_WSBEiJ_T0074582.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149256450 149266586 + MGP_WSBEiJ_P0074582 Arpc1b protein_coding protein_coding MGP_WSBEiJ_T0074583.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149267625 149270733 + MGP_WSBEiJ_P0074583 Arpc1b protein_coding protein_coding MGP_WSBEiJ_T0074584.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149267920 149269653 + Arpc1b protein_coding retained_intron MGP_WSBEiJ_T0074585.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149267920 149270879 + Arpc1b protein_coding processed_transcript MGP_WSBEiJ_T0074586.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149269837 149271275 + Arpc1b protein_coding retained_intron MGP_WSBEiJ_T0074587.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149270704 149276369 + MGP_WSBEiJ_P0074587 Arpc1b protein_coding protein_coding MGP_WSBEiJ_T0074588.1 MGP_WSBEiJ_G0029533.1 mouse_genomes_project 5 149271167 149272017 + Arpc1b protein_coding retained_intron MGP_WSBEiJ_T0001625.1 MGP_WSBEiJ_G0001548.1 mouse_genomes_project 5 67071263 67074742 - TEC TEC MGP_WSBEiJ_T0070231.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36269651 36289808 - Zbtb49 protein_coding processed_transcript MGP_WSBEiJ_T0070232.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36279992 36304077 - MGP_WSBEiJ_P0070232 Zbtb49 protein_coding protein_coding MGP_WSBEiJ_T0070233.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36280157 36304033 - MGP_WSBEiJ_P0070233 Zbtb49 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070234.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36280160 36304045 - MGP_WSBEiJ_P0070234 Zbtb49 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070235.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36280545 36304045 - MGP_WSBEiJ_P0070235 Zbtb49 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070236.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36280545 36304047 - MGP_WSBEiJ_P0070236 Zbtb49 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070237.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36283158 36283708 - MGP_WSBEiJ_P0070237 Zbtb49 protein_coding protein_coding MGP_WSBEiJ_T0070238.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36283659 36297172 - MGP_WSBEiJ_P0070238 Zbtb49 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070239.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36283715 36304051 - MGP_WSBEiJ_P0070239 Zbtb49 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070240.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36295657 36304074 - MGP_WSBEiJ_P0070240 Zbtb49 protein_coding protein_coding MGP_WSBEiJ_T0070241.1 MGP_WSBEiJ_G0028696.1 mouse_genomes_project 5 36298998 36304044 - Zbtb49 protein_coding retained_intron MGP_WSBEiJ_T0014620.1 MGP_WSBEiJ_G0012750.1 mouse_genomes_project 5 88639349 88639895 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014552.1 MGP_WSBEiJ_G0012682.1 mouse_genomes_project 5 58345348 58345727 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072718.1 MGP_WSBEiJ_G0029194.1 mouse_genomes_project 5 123072953 123082411 - MGP_WSBEiJ_P0072718 protein_coding protein_coding MGP_WSBEiJ_T0014676.1 MGP_WSBEiJ_G0012806.1 mouse_genomes_project 5 111127412 111127775 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008326.1 MGP_WSBEiJ_G0006760.1 mouse_genomes_project 5 153650818 153652192 + Gm42787 lincRNA lincRNA MGP_WSBEiJ_T0001692.1 MGP_WSBEiJ_G0001614.1 mouse_genomes_project 5 102636727 102638315 + TEC TEC MGP_WSBEiJ_T0074324.1 MGP_WSBEiJ_G0029477.1 mouse_genomes_project 5 144424312 144426274 - MGP_WSBEiJ_P0074324 Grifin protein_coding protein_coding MGP_WSBEiJ_T0001646.1 MGP_WSBEiJ_G0001568.1 mouse_genomes_project 5 72679030 72679549 - TEC TEC MGP_WSBEiJ_T0010492.1 MGP_WSBEiJ_G0008649.1 mouse_genomes_project 5 4832849 4832960 + Gm22196 miRNA miRNA MGP_WSBEiJ_T0074029.1 MGP_WSBEiJ_G0029415.1 mouse_genomes_project 5 141217580 141219115 + MGP_WSBEiJ_P0074029 Sap25 protein_coding protein_coding MGP_WSBEiJ_T0074030.1 MGP_WSBEiJ_G0029415.1 mouse_genomes_project 5 141217683 141219149 + MGP_WSBEiJ_P0074030 Sap25 protein_coding protein_coding MGP_WSBEiJ_T0074031.1 MGP_WSBEiJ_G0029415.1 mouse_genomes_project 5 141217741 141218588 + Sap25 protein_coding retained_intron MGP_WSBEiJ_T0074032.1 MGP_WSBEiJ_G0029415.1 mouse_genomes_project 5 141218190 141218794 + Sap25 protein_coding retained_intron MGP_WSBEiJ_T0074033.1 MGP_WSBEiJ_G0029415.1 mouse_genomes_project 5 141218424 141219084 + Sap25 protein_coding retained_intron MGP_WSBEiJ_T0074034.1 MGP_WSBEiJ_G0029415.1 mouse_genomes_project 5 141218595 141219146 + Sap25 protein_coding retained_intron MGP_WSBEiJ_T0073266.1 MGP_WSBEiJ_G0029281.1 mouse_genomes_project 5 127544447 127573074 - MGP_WSBEiJ_P0073266 Ccdc92 protein_coding protein_coding MGP_WSBEiJ_T0073267.1 MGP_WSBEiJ_G0029281.1 mouse_genomes_project 5 127545923 127572533 - MGP_WSBEiJ_P0073267 Ccdc92 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073268.1 MGP_WSBEiJ_G0029281.1 mouse_genomes_project 5 127546099 127562228 - MGP_WSBEiJ_P0073268 Ccdc92 protein_coding protein_coding MGP_WSBEiJ_T0014424.1 MGP_WSBEiJ_G0012554.1 mouse_genomes_project 5 6772718 6773681 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010531.1 MGP_WSBEiJ_G0008688.1 mouse_genomes_project 5 112123898 112123965 - Mir7026 miRNA miRNA MGP_WSBEiJ_T0010544.1 MGP_WSBEiJ_G0008701.1 mouse_genomes_project 5 126701416 126701495 + Mir7032 miRNA miRNA MGP_WSBEiJ_T0014702.1 MGP_WSBEiJ_G0012832.1 mouse_genomes_project 5 124999221 124999541 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074391.1 MGP_WSBEiJ_G0029492.1 mouse_genomes_project 5 146680371 146701541 + MGP_WSBEiJ_P0074391 Slc29a4 protein_coding protein_coding MGP_WSBEiJ_T0074392.1 MGP_WSBEiJ_G0029492.1 mouse_genomes_project 5 146690827 146711728 + MGP_WSBEiJ_P0074392 Slc29a4 protein_coding protein_coding MGP_WSBEiJ_T0008066.1 MGP_WSBEiJ_G0006580.1 mouse_genomes_project 5 89007409 89026968 + Gm42912 lincRNA lincRNA MGP_WSBEiJ_T0001638.1 MGP_WSBEiJ_G0001561.1 mouse_genomes_project 5 71841636 71842626 - TEC TEC MGP_WSBEiJ_T0099606.1 MGP_WSBEiJ_G0038269.1 mouse_genomes_project 5 87874929 87875052 - Gm24314 snoRNA snoRNA MGP_WSBEiJ_T0001668.1 MGP_WSBEiJ_G0001590.1 mouse_genomes_project 5 89769223 89771364 + TEC TEC MGP_WSBEiJ_T0071670.1 MGP_WSBEiJ_G0028982.1 mouse_genomes_project 5 101606086 101607185 + MGP_WSBEiJ_P0071670 Agpat9 protein_coding protein_coding MGP_WSBEiJ_T0071671.1 MGP_WSBEiJ_G0028982.1 mouse_genomes_project 5 101606503 101672057 + MGP_WSBEiJ_P0071671 Agpat9 protein_coding protein_coding MGP_WSBEiJ_T0071672.1 MGP_WSBEiJ_G0028982.1 mouse_genomes_project 5 101606593 101672057 + MGP_WSBEiJ_P0071672 Agpat9 protein_coding protein_coding MGP_WSBEiJ_T0071673.1 MGP_WSBEiJ_G0028982.1 mouse_genomes_project 5 101606738 101672060 + MGP_WSBEiJ_P0071673 Agpat9 protein_coding protein_coding MGP_WSBEiJ_T0071674.1 MGP_WSBEiJ_G0028982.1 mouse_genomes_project 5 101606791 101607225 + MGP_WSBEiJ_P0071674 Agpat9 protein_coding protein_coding MGP_WSBEiJ_T0008089.1 MGP_WSBEiJ_G0006600.1 mouse_genomes_project 5 99930681 99935884 + Gm43252 lincRNA lincRNA MGP_WSBEiJ_T0014409.1 MGP_WSBEiJ_G0012539.1 mouse_genomes_project 5 271069 271250 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014735.1 MGP_WSBEiJ_G0012865.1 mouse_genomes_project 5 144400092 144400496 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098397.1 MGP_WSBEiJ_G0037060.1 mouse_genomes_project 5 155178783 155178884 - Gm23641 snRNA snRNA MGP_WSBEiJ_T0071102.1 MGP_WSBEiJ_G0028845.1 mouse_genomes_project 5 76889284 76905640 - MGP_WSBEiJ_P0071102 Noa1 protein_coding protein_coding MGP_WSBEiJ_T0071103.1 MGP_WSBEiJ_G0028845.1 mouse_genomes_project 5 76900540 76905615 - Noa1 protein_coding retained_intron MGP_WSBEiJ_T0071104.1 MGP_WSBEiJ_G0028845.1 mouse_genomes_project 5 76901162 76903199 - Noa1 protein_coding processed_transcript MGP_WSBEiJ_T0074466.1 MGP_WSBEiJ_G0029507.1 mouse_genomes_project 5 147516325 147562699 + MGP_WSBEiJ_P0074466 Daglb protein_coding protein_coding MGP_WSBEiJ_T0074467.1 MGP_WSBEiJ_G0029507.1 mouse_genomes_project 5 147516354 147527079 + Daglb protein_coding retained_intron MGP_WSBEiJ_T0074468.1 MGP_WSBEiJ_G0029507.1 mouse_genomes_project 5 147524656 147529530 + Daglb protein_coding retained_intron MGP_WSBEiJ_T0074469.1 MGP_WSBEiJ_G0029507.1 mouse_genomes_project 5 147542138 147545455 + Daglb protein_coding retained_intron MGP_WSBEiJ_T0069244.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21964614 21969819 + MGP_WSBEiJ_P0069244 Slc4a2 protein_coding protein_coding MGP_WSBEiJ_T0069245.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21964630 21972353 + Slc4a2 protein_coding processed_transcript MGP_WSBEiJ_T0069246.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21964636 21972086 + MGP_WSBEiJ_P0069246 Slc4a2 protein_coding protein_coding MGP_WSBEiJ_T0069247.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21966009 21986049 + MGP_WSBEiJ_P0069247 Slc4a2 protein_coding protein_coding MGP_WSBEiJ_T0069248.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21966053 21969796 + Slc4a2 protein_coding processed_transcript MGP_WSBEiJ_T0069249.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21966062 21969910 + Slc4a2 protein_coding processed_transcript MGP_WSBEiJ_T0069250.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21969037 21972056 + MGP_WSBEiJ_P0069250 Slc4a2 protein_coding protein_coding MGP_WSBEiJ_T0069251.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21970412 21986046 + MGP_WSBEiJ_P0069251 Slc4a2 protein_coding protein_coding MGP_WSBEiJ_T0069252.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21970467 21972042 + Slc4a2 protein_coding processed_transcript MGP_WSBEiJ_T0069253.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21970627 21986046 + MGP_WSBEiJ_P0069253 Slc4a2 protein_coding protein_coding MGP_WSBEiJ_T0069254.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21971221 21971983 + Slc4a2 protein_coding retained_intron MGP_WSBEiJ_T0069255.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21973539 21976556 + Slc4a2 protein_coding retained_intron MGP_WSBEiJ_T0069256.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21977748 21978691 + Slc4a2 protein_coding retained_intron MGP_WSBEiJ_T0069257.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21978963 21984355 + Slc4a2 protein_coding retained_intron MGP_WSBEiJ_T0069260.1 MGP_WSBEiJ_G0028532.1 mouse_genomes_project 5 21984844 21985671 + Slc4a2 protein_coding retained_intron MGP_WSBEiJ_T0099599.1 MGP_WSBEiJ_G0038262.1 mouse_genomes_project 5 67796586 67796713 - Gm23605 snoRNA snoRNA MGP_WSBEiJ_T0074691.1 MGP_WSBEiJ_G0029560.1 mouse_genomes_project 5 151550056 151554548 + MGP_WSBEiJ_P0074691 Gsx1 protein_coding protein_coding MGP_WSBEiJ_T0004610.1 MGP_WSBEiJ_G0003989.1 mouse_genomes_project 5 43887526 43892671 + 9630001P10Rik antisense antisense MGP_WSBEiJ_T0004611.1 MGP_WSBEiJ_G0003989.1 mouse_genomes_project 5 43888159 43894372 + 9630001P10Rik antisense antisense MGP_WSBEiJ_T0004612.1 MGP_WSBEiJ_G0003989.1 mouse_genomes_project 5 43888253 43892993 + 9630001P10Rik antisense antisense MGP_WSBEiJ_T0008055.1 MGP_WSBEiJ_G0006572.1 mouse_genomes_project 5 77075149 77078509 + 1700017L05Rik lincRNA lincRNA MGP_WSBEiJ_T0071178.1 MGP_WSBEiJ_G0028858.1 mouse_genomes_project 5 86396846 86451555 - MGP_WSBEiJ_P0071178 Tmprss11a protein_coding protein_coding MGP_WSBEiJ_T0071179.1 MGP_WSBEiJ_G0028858.1 mouse_genomes_project 5 86402448 86405506 - Tmprss11a protein_coding retained_intron MGP_WSBEiJ_T0014603.1 MGP_WSBEiJ_G0012733.1 mouse_genomes_project 5 80654006 80656289 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014503.1 MGP_WSBEiJ_G0012633.1 mouse_genomes_project 5 31143044 31144089 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100861.1 MGP_WSBEiJ_G0039319.1 mouse_genomes_project 5 87472705 87474360 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0074571.1 MGP_WSBEiJ_G0029531.1 mouse_genomes_project 5 149161747 149164692 - MGP_WSBEiJ_P0074571 Gm4871 protein_coding protein_coding MGP_WSBEiJ_T0010539.1 MGP_WSBEiJ_G0008696.1 mouse_genomes_project 5 120516750 120516842 - Gm26455 miRNA miRNA MGP_WSBEiJ_T0072446.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117100271 117132777 - MGP_WSBEiJ_P0072446 Rnf10 protein_coding protein_coding MGP_WSBEiJ_T0072447.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117100629 117132771 - MGP_WSBEiJ_P0072447 Rnf10 protein_coding protein_coding MGP_WSBEiJ_T0072448.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117100629 117132774 - MGP_WSBEiJ_P0072448 Rnf10 protein_coding protein_coding MGP_WSBEiJ_T0072449.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117100634 117101562 - Rnf10 protein_coding retained_intron MGP_WSBEiJ_T0072450.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117100638 117132186 - MGP_WSBEiJ_P0072450 Rnf10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072451.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117102564 117104949 - Rnf10 protein_coding retained_intron MGP_WSBEiJ_T0072452.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117107556 117108351 - Rnf10 protein_coding processed_transcript MGP_WSBEiJ_T0072453.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117110156 117114500 - Rnf10 protein_coding retained_intron MGP_WSBEiJ_T0072454.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117110177 117119106 - Rnf10 protein_coding processed_transcript MGP_WSBEiJ_T0072455.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117115093 117116772 - Rnf10 protein_coding retained_intron MGP_WSBEiJ_T0072456.1 MGP_WSBEiJ_G0029141.1 mouse_genomes_project 5 117130511 117132774 - Rnf10 protein_coding retained_intron MGP_WSBEiJ_T0071729.1 MGP_WSBEiJ_G0028993.1 mouse_genomes_project 5 104835240 104858801 - MGP_WSBEiJ_P0071729 Hsd17b13 protein_coding protein_coding MGP_WSBEiJ_T0071730.1 MGP_WSBEiJ_G0028993.1 mouse_genomes_project 5 104843223 104858847 - MGP_WSBEiJ_P0071730 Hsd17b13 protein_coding protein_coding MGP_WSBEiJ_T0071731.1 MGP_WSBEiJ_G0028993.1 mouse_genomes_project 5 104843223 104858763 - MGP_WSBEiJ_P0071731 Hsd17b13 protein_coding protein_coding MGP_WSBEiJ_T0073639.1 MGP_WSBEiJ_G0029344.1 mouse_genomes_project 5 138298232 138300044 - MGP_WSBEiJ_P0073639 Cldn4 protein_coding protein_coding MGP_WSBEiJ_T0069213.1 MGP_WSBEiJ_G0028525.1 mouse_genomes_project 5 21705085 21726206 + MGP_WSBEiJ_P0069213 Nupl2 protein_coding protein_coding MGP_WSBEiJ_T0069214.1 MGP_WSBEiJ_G0028525.1 mouse_genomes_project 5 21705122 21725027 + MGP_WSBEiJ_P0069214 Nupl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069215.1 MGP_WSBEiJ_G0028525.1 mouse_genomes_project 5 21707630 21710006 + Nupl2 protein_coding retained_intron MGP_WSBEiJ_T0069216.1 MGP_WSBEiJ_G0028525.1 mouse_genomes_project 5 21720383 21723622 + Nupl2 protein_coding retained_intron MGP_WSBEiJ_T0072560.1 MGP_WSBEiJ_G0029159.1 mouse_genomes_project 5 118065291 118235836 - MGP_WSBEiJ_P0072560 Ccdc60 protein_coding protein_coding MGP_WSBEiJ_T0072561.1 MGP_WSBEiJ_G0029159.1 mouse_genomes_project 5 118110938 118235814 - MGP_WSBEiJ_P0072561 Ccdc60 protein_coding protein_coding MGP_WSBEiJ_T0072564.1 MGP_WSBEiJ_G0029161.1 mouse_genomes_project 5 118409085 118425777 - MGP_WSBEiJ_P0072564 Srrm4 protein_coding protein_coding MGP_WSBEiJ_T0072565.1 MGP_WSBEiJ_G0029161.1 mouse_genomes_project 5 118409095 118425901 - Srrm4 protein_coding retained_intron MGP_WSBEiJ_T0072566.1 MGP_WSBEiJ_G0029161.1 mouse_genomes_project 5 118409096 118572152 - MGP_WSBEiJ_P0072566 Srrm4 protein_coding protein_coding MGP_WSBEiJ_T0072567.1 MGP_WSBEiJ_G0029161.1 mouse_genomes_project 5 118448925 118449704 - Srrm4 protein_coding retained_intron MGP_WSBEiJ_T0071218.1 MGP_WSBEiJ_G0028876.1 mouse_genomes_project 5 87668968 87687082 - MGP_WSBEiJ_P0071218 Sult1e1 protein_coding protein_coding MGP_WSBEiJ_T0074795.1 MGP_WSBEiJ_G0029579.1 mouse_genomes_project 5 154078860 154170658 + MGP_WSBEiJ_P0074795 Wdr95 protein_coding protein_coding MGP_WSBEiJ_T0074796.1 MGP_WSBEiJ_G0029579.1 mouse_genomes_project 5 154079897 154119102 + Wdr95 protein_coding retained_intron MGP_WSBEiJ_T0074797.1 MGP_WSBEiJ_G0029579.1 mouse_genomes_project 5 154079903 154156709 + MGP_WSBEiJ_P0074797 Wdr95 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074798.1 MGP_WSBEiJ_G0029579.1 mouse_genomes_project 5 154079945 154120187 + Wdr95 protein_coding retained_intron MGP_WSBEiJ_T0074799.1 MGP_WSBEiJ_G0029579.1 mouse_genomes_project 5 154079945 154170658 + MGP_WSBEiJ_P0074799 Wdr95 protein_coding protein_coding MGP_WSBEiJ_T0074800.1 MGP_WSBEiJ_G0029579.1 mouse_genomes_project 5 154086813 154119102 + Wdr95 protein_coding retained_intron MGP_WSBEiJ_T0074801.1 MGP_WSBEiJ_G0029579.1 mouse_genomes_project 5 154138532 154145130 + Wdr95 protein_coding retained_intron MGP_WSBEiJ_T0001600.1 MGP_WSBEiJ_G0001523.1 mouse_genomes_project 5 64993031 64994644 + TEC TEC MGP_WSBEiJ_T0017553.1 MGP_WSBEiJ_G0015019.1 mouse_genomes_project 5 51409726 51433231 - 5033403H07Rik processed_transcript lincRNA MGP_WSBEiJ_T0017554.1 MGP_WSBEiJ_G0015019.1 mouse_genomes_project 5 51409739 51431135 - 5033403H07Rik processed_transcript lincRNA MGP_WSBEiJ_T0017555.1 MGP_WSBEiJ_G0015019.1 mouse_genomes_project 5 51429279 51431186 - 5033403H07Rik processed_transcript retained_intron MGP_WSBEiJ_T0071767.1 MGP_WSBEiJ_G0029011.1 mouse_genomes_project 5 106528071 106626194 + MGP_WSBEiJ_P0071767 Lrrc8c protein_coding protein_coding MGP_WSBEiJ_T0071768.1 MGP_WSBEiJ_G0029011.1 mouse_genomes_project 5 106528099 106591588 + MGP_WSBEiJ_P0071768 Lrrc8c protein_coding protein_coding MGP_WSBEiJ_T0071769.1 MGP_WSBEiJ_G0029011.1 mouse_genomes_project 5 106528156 106554323 + Lrrc8c protein_coding retained_intron MGP_WSBEiJ_T0071770.1 MGP_WSBEiJ_G0029011.1 mouse_genomes_project 5 106568643 106620056 + MGP_WSBEiJ_P0071770 Lrrc8c protein_coding protein_coding MGP_WSBEiJ_T0069797.1 MGP_WSBEiJ_G0028626.1 mouse_genomes_project 5 30625684 30650714 - protein_coding retained_intron MGP_WSBEiJ_T0069775.1 MGP_WSBEiJ_G0028622.1 mouse_genomes_project 5 29951133 29974915 + MGP_WSBEiJ_P0069775 Fosl2 protein_coding protein_coding MGP_WSBEiJ_T0069776.1 MGP_WSBEiJ_G0028622.1 mouse_genomes_project 5 29951505 29954983 + Fosl2 protein_coding retained_intron MGP_WSBEiJ_T0069777.1 MGP_WSBEiJ_G0028622.1 mouse_genomes_project 5 29961909 29970786 + Fosl2 protein_coding retained_intron MGP_WSBEiJ_T0008002.1 MGP_WSBEiJ_G0006529.1 mouse_genomes_project 5 50580573 50597906 - C130083M11Rik lincRNA lincRNA MGP_WSBEiJ_T0007987.1 MGP_WSBEiJ_G0006515.1 mouse_genomes_project 5 41228633 41240967 - Gm43700 lincRNA lincRNA MGP_WSBEiJ_T0071360.1 MGP_WSBEiJ_G0028915.1 mouse_genomes_project 5 91095460 91097006 + MGP_WSBEiJ_P0071360 Ppbp protein_coding protein_coding MGP_WSBEiJ_T0004584.1 MGP_WSBEiJ_G0003969.1 mouse_genomes_project 5 32119800 32120801 + Gm42846 antisense antisense MGP_WSBEiJ_T0008057.1 MGP_WSBEiJ_G0006574.1 mouse_genomes_project 5 81912453 81914755 - 1700031L13Rik lincRNA lincRNA MGP_WSBEiJ_T0008058.1 MGP_WSBEiJ_G0006574.1 mouse_genomes_project 5 81912472 81914758 - 1700031L13Rik lincRNA lincRNA MGP_WSBEiJ_T0008059.1 MGP_WSBEiJ_G0006574.1 mouse_genomes_project 5 81912482 81913390 - 1700031L13Rik lincRNA lincRNA MGP_WSBEiJ_T0008060.1 MGP_WSBEiJ_G0006574.1 mouse_genomes_project 5 81912730 81913382 - 1700031L13Rik lincRNA lincRNA MGP_WSBEiJ_T0001852.1 MGP_WSBEiJ_G0001772.1 mouse_genomes_project 5 145221833 145222514 - TEC TEC MGP_WSBEiJ_T0014608.1 MGP_WSBEiJ_G0012738.1 mouse_genomes_project 5 85972643 85973213 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007989.1 MGP_WSBEiJ_G0006517.1 mouse_genomes_project 5 41533834 41536017 - Gm43020 lincRNA lincRNA MGP_WSBEiJ_T0097436.1 MGP_WSBEiJ_G0036106.1 mouse_genomes_project 5 153977534 153979255 + 4933425D22Rik sense_intronic sense_intronic MGP_WSBEiJ_T0014768.1 MGP_WSBEiJ_G0012898.1 mouse_genomes_project 5 154587890 154589437 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099621.1 MGP_WSBEiJ_G0038284.1 mouse_genomes_project 5 123578674 123578808 + Gm26205 snoRNA snoRNA MGP_WSBEiJ_T0001469.1 MGP_WSBEiJ_G0001394.1 mouse_genomes_project 5 32546153 32546622 + TEC TEC MGP_WSBEiJ_T0073855.1 MGP_WSBEiJ_G0029384.1 mouse_genomes_project 5 140187668 140197498 + MGP_WSBEiJ_P0073855 Myl10 protein_coding protein_coding MGP_WSBEiJ_T0073856.1 MGP_WSBEiJ_G0029384.1 mouse_genomes_project 5 140187700 140197396 + MGP_WSBEiJ_P0073856 Myl10 protein_coding protein_coding MGP_WSBEiJ_T0073857.1 MGP_WSBEiJ_G0029384.1 mouse_genomes_project 5 140188215 140197498 + MGP_WSBEiJ_P0073857 Myl10 protein_coding protein_coding MGP_WSBEiJ_T0073858.1 MGP_WSBEiJ_G0029384.1 mouse_genomes_project 5 140188687 140197498 + MGP_WSBEiJ_P0073858 Myl10 protein_coding protein_coding MGP_WSBEiJ_T0073859.1 MGP_WSBEiJ_G0029384.1 mouse_genomes_project 5 140194352 140197498 + Myl10 protein_coding retained_intron MGP_WSBEiJ_T0073860.1 MGP_WSBEiJ_G0029384.1 mouse_genomes_project 5 140194403 140197496 + Myl10 protein_coding retained_intron MGP_WSBEiJ_T0072948.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125311223 125365211 - MGP_WSBEiJ_P0072948 Camkk2 protein_coding protein_coding MGP_WSBEiJ_T0072949.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125313247 125333332 - MGP_WSBEiJ_P0072949 Camkk2 protein_coding protein_coding MGP_WSBEiJ_T0072950.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125314581 125324846 - MGP_WSBEiJ_P0072950 Camkk2 protein_coding protein_coding MGP_WSBEiJ_T0072951.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125321372 125365218 - Camkk2 protein_coding retained_intron MGP_WSBEiJ_T0072952.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125327196 125344257 - MGP_WSBEiJ_P0072952 Camkk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072953.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125328784 125365154 - Camkk2 protein_coding processed_transcript MGP_WSBEiJ_T0072954.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125333297 125365100 - MGP_WSBEiJ_P0072954 Camkk2 protein_coding protein_coding MGP_WSBEiJ_T0072955.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125336671 125365144 - MGP_WSBEiJ_P0072955 Camkk2 protein_coding protein_coding MGP_WSBEiJ_T0072956.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125337938 125365228 - Camkk2 protein_coding retained_intron MGP_WSBEiJ_T0072957.1 MGP_WSBEiJ_G0029234.1 mouse_genomes_project 5 125344397 125365134 - MGP_WSBEiJ_P0072957 Camkk2 protein_coding protein_coding MGP_WSBEiJ_T0073338.1 MGP_WSBEiJ_G0029294.1 mouse_genomes_project 5 130490881 130555408 + Glt1d1 protein_coding retained_intron MGP_WSBEiJ_T0073339.1 MGP_WSBEiJ_G0029294.1 mouse_genomes_project 5 130490881 130574144 + MGP_WSBEiJ_P0073339 Glt1d1 protein_coding protein_coding MGP_WSBEiJ_T0073340.1 MGP_WSBEiJ_G0029294.1 mouse_genomes_project 5 130519025 130553379 + Glt1d1 protein_coding retained_intron MGP_WSBEiJ_T0001400.1 MGP_WSBEiJ_G0001328.1 mouse_genomes_project 5 4241020 4242565 - TEC TEC MGP_WSBEiJ_T0073562.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639857 137752604 - MGP_WSBEiJ_P0073562 Gtf2ird1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0073563.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639857 137752603 - MGP_WSBEiJ_P0073563 Gtf2ird1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0073564.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639859 137752621 - MGP_WSBEiJ_P0073564 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073565.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639859 137752161 - MGP_WSBEiJ_P0073565 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073566.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639864 137752593 - MGP_WSBEiJ_P0073566 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073567.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639872 137752621 - MGP_WSBEiJ_P0073567 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073568.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639882 137752481 - MGP_WSBEiJ_P0073568 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073569.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639882 137752481 - MGP_WSBEiJ_P0073569 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073570.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639882 137752489 - MGP_WSBEiJ_P0073570 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073571.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137639900 137752494 - MGP_WSBEiJ_P0073571 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073572.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137640776 137752494 - MGP_WSBEiJ_P0073572 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073573.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137640776 137752481 - MGP_WSBEiJ_P0073573 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073574.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137640837 137752597 - MGP_WSBEiJ_P0073574 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073575.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137640854 137752491 - MGP_WSBEiJ_P0073575 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073576.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137642387 137647906 - Gtf2ird1 protein_coding retained_intron MGP_WSBEiJ_T0073577.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137645310 137675494 - MGP_WSBEiJ_P0073577 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073578.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137647871 137675473 - MGP_WSBEiJ_P0073578 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073579.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137660193 137752182 - Gtf2ird1 protein_coding retained_intron MGP_WSBEiJ_T0073580.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137668497 137687623 - MGP_WSBEiJ_P0073580 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073581.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137668497 137687623 - MGP_WSBEiJ_P0073581 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073582.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137668706 137671529 - Gtf2ird1 protein_coding retained_intron MGP_WSBEiJ_T0073583.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137668709 137687623 - MGP_WSBEiJ_P0073583 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073584.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137670805 137687623 - MGP_WSBEiJ_P0073584 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073585.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137671794 137687527 - Gtf2ird1 protein_coding retained_intron MGP_WSBEiJ_T0073586.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137671910 137695093 - Gtf2ird1 protein_coding retained_intron MGP_WSBEiJ_T0073587.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137681217 137708872 - MGP_WSBEiJ_P0073587 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0073588.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137695807 137752584 - Gtf2ird1 protein_coding retained_intron MGP_WSBEiJ_T0073589.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137697680 137752579 - Gtf2ird1 protein_coding processed_transcript MGP_WSBEiJ_T0073590.1 MGP_WSBEiJ_G0029333.1 mouse_genomes_project 5 137703939 137751857 - MGP_WSBEiJ_P0073590 Gtf2ird1 protein_coding protein_coding MGP_WSBEiJ_T0071618.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101181004 101243277 - MGP_WSBEiJ_P0071618 Lin54 protein_coding protein_coding MGP_WSBEiJ_T0071619.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101181014 101240392 - MGP_WSBEiJ_P0071619 Lin54 protein_coding protein_coding MGP_WSBEiJ_T0071620.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101181119 101243313 - MGP_WSBEiJ_P0071620 Lin54 protein_coding protein_coding MGP_WSBEiJ_T0071621.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101181119 101240434 - MGP_WSBEiJ_P0071621 Lin54 protein_coding protein_coding MGP_WSBEiJ_T0071622.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101181128 101240379 - MGP_WSBEiJ_P0071622 Lin54 protein_coding protein_coding MGP_WSBEiJ_T0071623.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101181286 101243326 - MGP_WSBEiJ_P0071623 Lin54 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071624.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101182638 101240324 - MGP_WSBEiJ_P0071624 Lin54 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071625.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101182638 101240324 - MGP_WSBEiJ_P0071625 Lin54 protein_coding protein_coding MGP_WSBEiJ_T0071626.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101200562 101227433 - MGP_WSBEiJ_P0071626 Lin54 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071627.1 MGP_WSBEiJ_G0028974.1 mouse_genomes_project 5 101226350 101240379 - Lin54 protein_coding retained_intron MGP_WSBEiJ_T0074601.1 MGP_WSBEiJ_G0029536.1 mouse_genomes_project 5 149295897 149316732 - MGP_WSBEiJ_P0074601 Ptcd1 protein_coding protein_coding MGP_WSBEiJ_T0074602.1 MGP_WSBEiJ_G0029536.1 mouse_genomes_project 5 149315071 149316580 - MGP_WSBEiJ_P0074602 Ptcd1 protein_coding protein_coding MGP_WSBEiJ_T0001738.1 MGP_WSBEiJ_G0001660.1 mouse_genomes_project 5 118338477 118339940 - TEC TEC MGP_WSBEiJ_T0097077.1 MGP_WSBEiJ_G0035758.1 mouse_genomes_project 5 153813214 153813320 - n-R5s180 rRNA rRNA MGP_WSBEiJ_T0001765.1 MGP_WSBEiJ_G0001687.1 mouse_genomes_project 5 124714975 124717320 + TEC TEC MGP_WSBEiJ_T0004761.1 MGP_WSBEiJ_G0004097.1 mouse_genomes_project 5 127815395 127818914 + Gm42839 antisense antisense MGP_WSBEiJ_T0069109.1 MGP_WSBEiJ_G0028505.1 mouse_genomes_project 5 18780927 18839416 + MGP_WSBEiJ_P0069109 Fam185a protein_coding protein_coding MGP_WSBEiJ_T0069110.1 MGP_WSBEiJ_G0028505.1 mouse_genomes_project 5 18780970 18789194 + Fam185a protein_coding retained_intron MGP_WSBEiJ_T0069111.1 MGP_WSBEiJ_G0028505.1 mouse_genomes_project 5 18789315 18838096 + Fam185a protein_coding processed_transcript MGP_WSBEiJ_T0014470.1 MGP_WSBEiJ_G0012600.1 mouse_genomes_project 5 21779053 21780590 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069976.1 MGP_WSBEiJ_G0028655.1 mouse_genomes_project 5 32494736 32520589 + MGP_WSBEiJ_P0069976 Sh3bp2 protein_coding protein_coding MGP_WSBEiJ_T0069977.1 MGP_WSBEiJ_G0028655.1 mouse_genomes_project 5 32494744 32532529 + MGP_WSBEiJ_P0069977 Sh3bp2 protein_coding protein_coding MGP_WSBEiJ_T0069978.1 MGP_WSBEiJ_G0028655.1 mouse_genomes_project 5 32512267 32526609 + Sh3bp2 protein_coding retained_intron MGP_WSBEiJ_T0069979.1 MGP_WSBEiJ_G0028655.1 mouse_genomes_project 5 32512267 32521635 + MGP_WSBEiJ_P0069979 Sh3bp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069980.1 MGP_WSBEiJ_G0028655.1 mouse_genomes_project 5 32512267 32532513 + MGP_WSBEiJ_P0069980 Sh3bp2 protein_coding protein_coding MGP_WSBEiJ_T0069981.1 MGP_WSBEiJ_G0028655.1 mouse_genomes_project 5 32518478 32532513 + MGP_WSBEiJ_P0069981 Sh3bp2 protein_coding protein_coding MGP_WSBEiJ_T0069982.1 MGP_WSBEiJ_G0028655.1 mouse_genomes_project 5 32518590 32532526 + MGP_WSBEiJ_P0069982 Sh3bp2 protein_coding protein_coding MGP_WSBEiJ_T0069983.1 MGP_WSBEiJ_G0028655.1 mouse_genomes_project 5 32520433 32521681 + Sh3bp2 protein_coding retained_intron MGP_WSBEiJ_T0001683.1 MGP_WSBEiJ_G0001605.1 mouse_genomes_project 5 97613260 97613888 + TEC TEC MGP_WSBEiJ_T0014749.1 MGP_WSBEiJ_G0012879.1 mouse_genomes_project 5 149420855 149421354 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072424.1 MGP_WSBEiJ_G0029136.1 mouse_genomes_project 5 116938155 116950871 - Acads protein_coding retained_intron MGP_WSBEiJ_T0072425.1 MGP_WSBEiJ_G0029136.1 mouse_genomes_project 5 116938155 116950930 - MGP_WSBEiJ_P0072425 Acads protein_coding protein_coding MGP_WSBEiJ_T0072426.1 MGP_WSBEiJ_G0029136.1 mouse_genomes_project 5 116939852 116950894 - Acads protein_coding processed_transcript MGP_WSBEiJ_T0072427.1 MGP_WSBEiJ_G0029136.1 mouse_genomes_project 5 116940640 116950859 - Acads protein_coding retained_intron MGP_WSBEiJ_T0001695.1 MGP_WSBEiJ_G0001617.1 mouse_genomes_project 5 103811849 103814329 - TEC TEC MGP_WSBEiJ_T0001497.1 MGP_WSBEiJ_G0001422.1 mouse_genomes_project 5 42737913 42738816 - TEC TEC MGP_WSBEiJ_T0008286.1 MGP_WSBEiJ_G0006726.1 mouse_genomes_project 5 141072935 141080061 + Gm8066 lincRNA lincRNA MGP_WSBEiJ_T0010567.1 MGP_WSBEiJ_G0008724.1 mouse_genomes_project 5 147183911 147184037 + Gm44405 miRNA miRNA MGP_WSBEiJ_T0100851.1 MGP_WSBEiJ_G0039309.1 mouse_genomes_project 5 57135298 57136815 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0071661.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101560268 101577257 - MGP_WSBEiJ_P0071661 Fam175a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071662.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101560268 101577282 - MGP_WSBEiJ_P0071662 Fam175a protein_coding protein_coding MGP_WSBEiJ_T0071663.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101560268 101577260 - MGP_WSBEiJ_P0071663 Fam175a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071664.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101560268 101577257 - MGP_WSBEiJ_P0071664 Fam175a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071665.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101560279 101577257 - MGP_WSBEiJ_P0071665 Fam175a protein_coding protein_coding MGP_WSBEiJ_T0071666.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101561393 101562383 - Fam175a protein_coding retained_intron MGP_WSBEiJ_T0071667.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101564839 101577258 - MGP_WSBEiJ_P0071667 Fam175a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071668.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101574063 101577264 - Fam175a protein_coding retained_intron MGP_WSBEiJ_T0071669.1 MGP_WSBEiJ_G0028981.1 mouse_genomes_project 5 101574672 101577257 - Fam175a protein_coding retained_intron MGP_WSBEiJ_T0074082.1 MGP_WSBEiJ_G0029428.1 mouse_genomes_project 5 141578700 141588475 + MGP_WSBEiJ_P0074082 Azgp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074083.1 MGP_WSBEiJ_G0029428.1 mouse_genomes_project 5 141578719 141588475 + MGP_WSBEiJ_P0074083 Azgp1 protein_coding protein_coding MGP_WSBEiJ_T0074084.1 MGP_WSBEiJ_G0029428.1 mouse_genomes_project 5 141578748 141583854 + Azgp1 protein_coding retained_intron MGP_WSBEiJ_T0008309.1 MGP_WSBEiJ_G0006746.1 mouse_genomes_project 5 151658577 151659121 + Gm27033 lincRNA lincRNA MGP_WSBEiJ_T0070762.1 MGP_WSBEiJ_G0028782.1 mouse_genomes_project 5 66539576 66590953 + MGP_WSBEiJ_P0070762 Slc30a9 protein_coding protein_coding MGP_WSBEiJ_T0070763.1 MGP_WSBEiJ_G0028782.1 mouse_genomes_project 5 66539576 66590950 + MGP_WSBEiJ_P0070763 Slc30a9 protein_coding protein_coding MGP_WSBEiJ_T0070764.1 MGP_WSBEiJ_G0028782.1 mouse_genomes_project 5 66539585 66542381 + Slc30a9 protein_coding retained_intron MGP_WSBEiJ_T0070765.1 MGP_WSBEiJ_G0028782.1 mouse_genomes_project 5 66539586 66588296 + MGP_WSBEiJ_P0070765 Slc30a9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070766.1 MGP_WSBEiJ_G0028782.1 mouse_genomes_project 5 66539805 66551513 + Slc30a9 protein_coding processed_transcript MGP_WSBEiJ_T0070767.1 MGP_WSBEiJ_G0028782.1 mouse_genomes_project 5 66548310 66574718 + MGP_WSBEiJ_P0070767 Slc30a9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070768.1 MGP_WSBEiJ_G0028782.1 mouse_genomes_project 5 66548336 66561351 + MGP_WSBEiJ_P0070768 Slc30a9 protein_coding protein_coding MGP_WSBEiJ_T0070769.1 MGP_WSBEiJ_G0028782.1 mouse_genomes_project 5 66564940 66585865 + Slc30a9 protein_coding retained_intron MGP_WSBEiJ_T0008049.1 MGP_WSBEiJ_G0006567.1 mouse_genomes_project 5 76018654 76057431 + lincRNA lincRNA MGP_WSBEiJ_T0008050.1 MGP_WSBEiJ_G0006567.1 mouse_genomes_project 5 76018957 76057387 + lincRNA lincRNA MGP_WSBEiJ_T0071992.1 MGP_WSBEiJ_G0029051.1 mouse_genomes_project 5 109965470 109985188 - MGP_WSBEiJ_P0071992 Tmed11 protein_coding protein_coding MGP_WSBEiJ_T0001539.1 MGP_WSBEiJ_G0001463.1 mouse_genomes_project 5 47759317 47764932 - TEC TEC MGP_WSBEiJ_T0008047.1 MGP_WSBEiJ_G0006565.1 mouse_genomes_project 5 75328311 75332026 - Gm28865 lincRNA lincRNA MGP_WSBEiJ_T0004752.1 MGP_WSBEiJ_G0004091.1 mouse_genomes_project 5 126903060 126903980 + Pitpnm2os2 antisense antisense MGP_WSBEiJ_T0004753.1 MGP_WSBEiJ_G0004091.1 mouse_genomes_project 5 126903113 126908482 + Pitpnm2os2 antisense antisense MGP_WSBEiJ_T0004754.1 MGP_WSBEiJ_G0004091.1 mouse_genomes_project 5 126903794 126906267 + Pitpnm2os2 antisense antisense MGP_WSBEiJ_T0074241.1 MGP_WSBEiJ_G0029456.1 mouse_genomes_project 5 143073593 143084540 - MGP_WSBEiJ_P0074241 Cox19 protein_coding protein_coding MGP_WSBEiJ_T0074242.1 MGP_WSBEiJ_G0029456.1 mouse_genomes_project 5 143075192 143084484 - Cox19 protein_coding processed_transcript MGP_WSBEiJ_T0074243.1 MGP_WSBEiJ_G0029456.1 mouse_genomes_project 5 143075510 143076946 - Cox19 protein_coding processed_transcript MGP_WSBEiJ_T0074244.1 MGP_WSBEiJ_G0029456.1 mouse_genomes_project 5 143075591 143092347 - MGP_WSBEiJ_P0074244 Cox19 protein_coding protein_coding MGP_WSBEiJ_T0074245.1 MGP_WSBEiJ_G0029456.1 mouse_genomes_project 5 143075680 143084432 - MGP_WSBEiJ_P0074245 Cox19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074246.1 MGP_WSBEiJ_G0029456.1 mouse_genomes_project 5 143080092 143084467 - Cox19 protein_coding retained_intron MGP_WSBEiJ_T0074247.1 MGP_WSBEiJ_G0029456.1 mouse_genomes_project 5 143080261 143084472 - Cox19 protein_coding retained_intron MGP_WSBEiJ_T0008220.1 MGP_WSBEiJ_G0006688.1 mouse_genomes_project 5 125746671 125753284 - AI480526 lincRNA lincRNA MGP_WSBEiJ_T0008222.1 MGP_WSBEiJ_G0006688.1 mouse_genomes_project 5 125749463 125754519 - AI480526 lincRNA lincRNA MGP_WSBEiJ_T0008223.1 MGP_WSBEiJ_G0006688.1 mouse_genomes_project 5 125749634 125756271 - AI480526 lincRNA lincRNA MGP_WSBEiJ_T0008224.1 MGP_WSBEiJ_G0006688.1 mouse_genomes_project 5 125750014 125756861 - AI480526 lincRNA lincRNA MGP_WSBEiJ_T0008226.1 MGP_WSBEiJ_G0006688.1 mouse_genomes_project 5 125751399 125756284 - AI480526 lincRNA lincRNA MGP_WSBEiJ_T0008227.1 MGP_WSBEiJ_G0006688.1 mouse_genomes_project 5 125752645 125755461 - AI480526 lincRNA lincRNA MGP_WSBEiJ_T0008228.1 MGP_WSBEiJ_G0006688.1 mouse_genomes_project 5 125753217 125756262 - AI480526 lincRNA lincRNA MGP_WSBEiJ_T0004644.1 MGP_WSBEiJ_G0004017.1 mouse_genomes_project 5 76990650 76997770 + Gm43261 antisense antisense MGP_WSBEiJ_T0069241.1 MGP_WSBEiJ_G0028531.1 mouse_genomes_project 5 21959009 21964308 - MGP_WSBEiJ_P0069241 Cdk5 protein_coding protein_coding MGP_WSBEiJ_T0069242.1 MGP_WSBEiJ_G0028531.1 mouse_genomes_project 5 21960144 21964263 - MGP_WSBEiJ_P0069242 Cdk5 protein_coding protein_coding MGP_WSBEiJ_T0069243.1 MGP_WSBEiJ_G0028531.1 mouse_genomes_project 5 21961767 21963475 - Cdk5 protein_coding retained_intron MGP_WSBEiJ_T0008305.1 MGP_WSBEiJ_G0006742.1 mouse_genomes_project 5 150498141 150501017 - lincRNA lincRNA MGP_WSBEiJ_T0072433.1 MGP_WSBEiJ_G0029139.1 mouse_genomes_project 5 117009054 117037607 - MGP_WSBEiJ_P0072433 Cabp1 protein_coding protein_coding MGP_WSBEiJ_T0072434.1 MGP_WSBEiJ_G0029139.1 mouse_genomes_project 5 117009054 117029548 - MGP_WSBEiJ_P0072434 Cabp1 protein_coding protein_coding MGP_WSBEiJ_T0072435.1 MGP_WSBEiJ_G0029139.1 mouse_genomes_project 5 117009078 117024614 - Cabp1 protein_coding processed_transcript MGP_WSBEiJ_T0072436.1 MGP_WSBEiJ_G0029139.1 mouse_genomes_project 5 117009310 117029308 - MGP_WSBEiJ_P0072436 Cabp1 protein_coding protein_coding MGP_WSBEiJ_T0072437.1 MGP_WSBEiJ_G0029139.1 mouse_genomes_project 5 117009335 117029245 - MGP_WSBEiJ_P0072437 Cabp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072438.1 MGP_WSBEiJ_G0029139.1 mouse_genomes_project 5 117014521 117024451 - Cabp1 protein_coding retained_intron MGP_WSBEiJ_T0072439.1 MGP_WSBEiJ_G0029139.1 mouse_genomes_project 5 117023563 117027336 - Cabp1 protein_coding retained_intron MGP_WSBEiJ_T0073422.1 MGP_WSBEiJ_G0029310.1 mouse_genomes_project 5 132870217 132891168 - MGP_WSBEiJ_P0073422 Phkg1 protein_coding protein_coding MGP_WSBEiJ_T0073423.1 MGP_WSBEiJ_G0029310.1 mouse_genomes_project 5 132872509 132914829 - MGP_WSBEiJ_P0073423 Phkg1 protein_coding protein_coding MGP_WSBEiJ_T0073424.1 MGP_WSBEiJ_G0029310.1 mouse_genomes_project 5 132872514 132876846 - Phkg1 protein_coding retained_intron MGP_WSBEiJ_T0073425.1 MGP_WSBEiJ_G0029310.1 mouse_genomes_project 5 132876617 132878736 - Phkg1 protein_coding processed_transcript MGP_WSBEiJ_T0073426.1 MGP_WSBEiJ_G0029310.1 mouse_genomes_project 5 132889579 132891119 - Phkg1 protein_coding retained_intron MGP_WSBEiJ_T0071318.1 MGP_WSBEiJ_G0028906.1 mouse_genomes_project 5 90520518 90529845 - MGP_WSBEiJ_P0071318 Cox18 protein_coding protein_coding MGP_WSBEiJ_T0071319.1 MGP_WSBEiJ_G0028906.1 mouse_genomes_project 5 90520518 90529816 - MGP_WSBEiJ_P0071319 Cox18 protein_coding protein_coding MGP_WSBEiJ_T0071320.1 MGP_WSBEiJ_G0028906.1 mouse_genomes_project 5 90520521 90521376 - Cox18 protein_coding processed_transcript MGP_WSBEiJ_T0071321.1 MGP_WSBEiJ_G0028906.1 mouse_genomes_project 5 90520521 90523673 - Cox18 protein_coding retained_intron MGP_WSBEiJ_T0071322.1 MGP_WSBEiJ_G0028906.1 mouse_genomes_project 5 90520524 90521817 - Cox18 protein_coding retained_intron MGP_WSBEiJ_T0071323.1 MGP_WSBEiJ_G0028906.1 mouse_genomes_project 5 90523327 90525586 - Cox18 protein_coding retained_intron MGP_WSBEiJ_T0071324.1 MGP_WSBEiJ_G0028906.1 mouse_genomes_project 5 90524728 90529783 - MGP_WSBEiJ_P0071324 Cox18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071847.1 MGP_WSBEiJ_G0029025.1 mouse_genomes_project 5 108607143 108656909 + MGP_WSBEiJ_P0071847 protein_coding protein_coding MGP_WSBEiJ_T0071910.1 MGP_WSBEiJ_G0029035.1 mouse_genomes_project 5 109234587 109268222 - MGP_WSBEiJ_P0071910 Tmed5 protein_coding protein_coding MGP_WSBEiJ_T0071911.1 MGP_WSBEiJ_G0029035.1 mouse_genomes_project 5 109245936 109268240 - MGP_WSBEiJ_P0071911 Tmed5 protein_coding protein_coding MGP_WSBEiJ_T0071912.1 MGP_WSBEiJ_G0029035.1 mouse_genomes_project 5 109250710 109268277 - MGP_WSBEiJ_P0071912 Tmed5 protein_coding protein_coding MGP_WSBEiJ_T0071913.1 MGP_WSBEiJ_G0029035.1 mouse_genomes_project 5 109252138 109268206 - MGP_WSBEiJ_P0071913 Tmed5 protein_coding protein_coding MGP_WSBEiJ_T0071914.1 MGP_WSBEiJ_G0029035.1 mouse_genomes_project 5 109265125 109268190 - MGP_WSBEiJ_P0071914 Tmed5 protein_coding protein_coding MGP_WSBEiJ_T0071915.1 MGP_WSBEiJ_G0029035.1 mouse_genomes_project 5 109265380 109268187 - MGP_WSBEiJ_P0071915 Tmed5 protein_coding protein_coding MGP_WSBEiJ_T0097066.1 MGP_WSBEiJ_G0035747.1 mouse_genomes_project 5 64206094 64206213 + Gm25154 rRNA rRNA MGP_WSBEiJ_T0069918.1 MGP_WSBEiJ_G0028645.1 mouse_genomes_project 5 31925393 31926984 + MGP_WSBEiJ_P0069918 Gm1673 protein_coding protein_coding MGP_WSBEiJ_T0069919.1 MGP_WSBEiJ_G0028645.1 mouse_genomes_project 5 31925397 31926980 + Gm1673 protein_coding retained_intron MGP_WSBEiJ_T0069920.1 MGP_WSBEiJ_G0028645.1 mouse_genomes_project 5 31925430 31926980 + MGP_WSBEiJ_P0069920 Gm1673 protein_coding protein_coding MGP_WSBEiJ_T0069921.1 MGP_WSBEiJ_G0028645.1 mouse_genomes_project 5 31925434 31926977 + MGP_WSBEiJ_P0069921 Gm1673 protein_coding protein_coding MGP_WSBEiJ_T0069922.1 MGP_WSBEiJ_G0028645.1 mouse_genomes_project 5 31925470 31926981 + MGP_WSBEiJ_P0069922 Gm1673 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069923.1 MGP_WSBEiJ_G0028645.1 mouse_genomes_project 5 31925494 31926980 + MGP_WSBEiJ_P0069923 Gm1673 protein_coding protein_coding MGP_WSBEiJ_T0001771.1 MGP_WSBEiJ_G0001693.1 mouse_genomes_project 5 125365570 125374186 + TEC TEC MGP_WSBEiJ_T0072173.1 MGP_WSBEiJ_G0029087.1 mouse_genomes_project 5 113915775 113918008 - MGP_WSBEiJ_P0072173 Gm6583 protein_coding protein_coding MGP_WSBEiJ_T0008039.1 MGP_WSBEiJ_G0006558.1 mouse_genomes_project 5 74176206 74180761 + Gm42575 lincRNA lincRNA MGP_WSBEiJ_T0001608.1 MGP_WSBEiJ_G0001531.1 mouse_genomes_project 5 65382840 65385790 + TEC TEC MGP_WSBEiJ_T0072198.1 MGP_WSBEiJ_G0029093.1 mouse_genomes_project 5 114666679 114679413 - MGP_WSBEiJ_P0072198 Crybb2 protein_coding protein_coding MGP_WSBEiJ_T0072199.1 MGP_WSBEiJ_G0029093.1 mouse_genomes_project 5 114666686 114678062 - MGP_WSBEiJ_P0072199 Crybb2 protein_coding protein_coding MGP_WSBEiJ_T0072200.1 MGP_WSBEiJ_G0029093.1 mouse_genomes_project 5 114672431 114677753 - Crybb2 protein_coding processed_transcript MGP_WSBEiJ_T0072201.1 MGP_WSBEiJ_G0029093.1 mouse_genomes_project 5 114677349 114678067 - Crybb2 protein_coding processed_transcript MGP_WSBEiJ_T0072202.1 MGP_WSBEiJ_G0029093.1 mouse_genomes_project 5 114677987 114678790 - Crybb2 protein_coding processed_transcript MGP_WSBEiJ_T0073370.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132520909 132591092 + MGP_WSBEiJ_P0073370 Sfswap protein_coding protein_coding MGP_WSBEiJ_T0073371.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132520928 132589356 + MGP_WSBEiJ_P0073371 Sfswap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073372.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132520934 132524332 + Sfswap protein_coding retained_intron MGP_WSBEiJ_T0073373.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132520939 132591089 + Sfswap protein_coding processed_transcript MGP_WSBEiJ_T0073374.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132521137 132524070 + MGP_WSBEiJ_P0073374 Sfswap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073375.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132522082 132522737 + Sfswap protein_coding TEC MGP_WSBEiJ_T0073376.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132522847 132523823 + Sfswap protein_coding processed_transcript MGP_WSBEiJ_T0073377.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132523662 132524577 + Sfswap protein_coding retained_intron MGP_WSBEiJ_T0073378.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132523784 132574419 + MGP_WSBEiJ_P0073378 Sfswap protein_coding unknown_likely_coding MGP_WSBEiJ_T0073379.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132524029 132532819 + Sfswap protein_coding retained_intron MGP_WSBEiJ_T0073380.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132561057 132570504 + MGP_WSBEiJ_P0073380 Sfswap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073381.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132568582 132591089 + Sfswap protein_coding retained_intron MGP_WSBEiJ_T0073382.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132570419 132579148 + Sfswap protein_coding processed_transcript MGP_WSBEiJ_T0073383.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132579807 132591092 + Sfswap protein_coding retained_intron MGP_WSBEiJ_T0073384.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132580148 132589722 + Sfswap protein_coding retained_intron MGP_WSBEiJ_T0073385.1 MGP_WSBEiJ_G0029302.1 mouse_genomes_project 5 132590424 132591092 + Sfswap protein_coding retained_intron MGP_WSBEiJ_T0099625.1 MGP_WSBEiJ_G0038288.1 mouse_genomes_project 5 151171223 151171294 + Gm25091 snoRNA snoRNA MGP_WSBEiJ_T0100110.1 MGP_WSBEiJ_G0038712.1 mouse_genomes_project 5 73734059 73734516 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0014712.1 MGP_WSBEiJ_G0012842.1 mouse_genomes_project 5 137159561 137160405 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071366.1 MGP_WSBEiJ_G0028918.1 mouse_genomes_project 5 91122523 91131437 + MGP_WSBEiJ_P0071366 Cxcl15 protein_coding protein_coding MGP_WSBEiJ_T0014621.1 MGP_WSBEiJ_G0012751.1 mouse_genomes_project 5 88760235 88760356 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014596.1 MGP_WSBEiJ_G0012726.1 mouse_genomes_project 5 76294201 76294642 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014682.1 MGP_WSBEiJ_G0012812.1 mouse_genomes_project 5 112492379 112492745 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069137.1 MGP_WSBEiJ_G0028513.1 mouse_genomes_project 5 19193839 19252527 - MGP_WSBEiJ_P0069137 Slc26a5 protein_coding protein_coding MGP_WSBEiJ_T0069138.1 MGP_WSBEiJ_G0028513.1 mouse_genomes_project 5 19193839 19248921 - MGP_WSBEiJ_P0069138 Slc26a5 protein_coding protein_coding MGP_WSBEiJ_T0069139.1 MGP_WSBEiJ_G0028513.1 mouse_genomes_project 5 19194202 19233183 - MGP_WSBEiJ_P0069139 Slc26a5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069140.1 MGP_WSBEiJ_G0028513.1 mouse_genomes_project 5 19194333 19233135 - MGP_WSBEiJ_P0069140 Slc26a5 protein_coding protein_coding MGP_WSBEiJ_T0069141.1 MGP_WSBEiJ_G0028513.1 mouse_genomes_project 5 19199816 19204566 - Slc26a5 protein_coding retained_intron MGP_WSBEiJ_T0001741.1 MGP_WSBEiJ_G0001663.1 mouse_genomes_project 5 118814055 118814488 + TEC TEC MGP_WSBEiJ_T0008009.1 MGP_WSBEiJ_G0006536.1 mouse_genomes_project 5 57229614 57233851 + lincRNA lincRNA MGP_WSBEiJ_T0073269.1 MGP_WSBEiJ_G0029282.1 mouse_genomes_project 5 127573340 127599270 + MGP_WSBEiJ_P0073269 Zfp664 protein_coding protein_coding MGP_WSBEiJ_T0073270.1 MGP_WSBEiJ_G0029282.1 mouse_genomes_project 5 127573413 127618538 + Zfp664 protein_coding processed_transcript MGP_WSBEiJ_T0073271.1 MGP_WSBEiJ_G0029282.1 mouse_genomes_project 5 127573688 127595947 + Zfp664 protein_coding processed_transcript MGP_WSBEiJ_T0073272.1 MGP_WSBEiJ_G0029282.1 mouse_genomes_project 5 127584802 127586948 + Zfp664 protein_coding processed_transcript MGP_WSBEiJ_T0073273.1 MGP_WSBEiJ_G0029282.1 mouse_genomes_project 5 127586620 127596117 + Zfp664 protein_coding processed_transcript MGP_WSBEiJ_T0073274.1 MGP_WSBEiJ_G0029282.1 mouse_genomes_project 5 127595208 127599270 + Zfp664 protein_coding processed_transcript MGP_WSBEiJ_T0014772.1 MGP_WSBEiJ_G0012902.1 mouse_genomes_project 5 155658776 155661407 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014607.1 MGP_WSBEiJ_G0012737.1 mouse_genomes_project 5 84834610 84835277 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098356.1 MGP_WSBEiJ_G0037019.1 mouse_genomes_project 5 79829270 79829377 + Gm24304 snRNA snRNA MGP_WSBEiJ_T0001573.1 MGP_WSBEiJ_G0001497.1 mouse_genomes_project 5 56708176 56710280 + TEC TEC MGP_WSBEiJ_T0073891.1 MGP_WSBEiJ_G0029390.1 mouse_genomes_project 5 140521742 140531375 + MGP_WSBEiJ_P0073891 Plod3 protein_coding protein_coding MGP_WSBEiJ_T0073892.1 MGP_WSBEiJ_G0029390.1 mouse_genomes_project 5 140522101 140526813 + Plod3 protein_coding retained_intron MGP_WSBEiJ_T0073893.1 MGP_WSBEiJ_G0029390.1 mouse_genomes_project 5 140522199 140527430 + Plod3 protein_coding retained_intron MGP_WSBEiJ_T0073894.1 MGP_WSBEiJ_G0029390.1 mouse_genomes_project 5 140525030 140528906 + Plod3 protein_coding retained_intron MGP_WSBEiJ_T0073895.1 MGP_WSBEiJ_G0029390.1 mouse_genomes_project 5 140525226 140526813 + Plod3 protein_coding retained_intron MGP_WSBEiJ_T0073896.1 MGP_WSBEiJ_G0029390.1 mouse_genomes_project 5 140526348 140529904 + MGP_WSBEiJ_P0073896 Plod3 protein_coding protein_coding MGP_WSBEiJ_T0001513.1 MGP_WSBEiJ_G0001438.1 mouse_genomes_project 5 46372652 46375251 + TEC TEC MGP_WSBEiJ_T0071765.1 MGP_WSBEiJ_G0029009.1 mouse_genomes_project 5 106356133 106358811 - protein_coding processed_transcript MGP_WSBEiJ_T0071628.1 MGP_WSBEiJ_G0028975.1 mouse_genomes_project 5 101260962 101291722 + MGP_WSBEiJ_P0071628 Cops4 protein_coding protein_coding MGP_WSBEiJ_T0071629.1 MGP_WSBEiJ_G0028975.1 mouse_genomes_project 5 101261096 101274726 + Cops4 protein_coding retained_intron MGP_WSBEiJ_T0071630.1 MGP_WSBEiJ_G0028975.1 mouse_genomes_project 5 101261110 101280167 + MGP_WSBEiJ_P0071630 Cops4 protein_coding protein_coding MGP_WSBEiJ_T0071631.1 MGP_WSBEiJ_G0028975.1 mouse_genomes_project 5 101261125 101276080 + MGP_WSBEiJ_P0071631 Cops4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071632.1 MGP_WSBEiJ_G0028975.1 mouse_genomes_project 5 101261390 101280053 + MGP_WSBEiJ_P0071632 Cops4 protein_coding protein_coding MGP_WSBEiJ_T0071633.1 MGP_WSBEiJ_G0028975.1 mouse_genomes_project 5 101271273 101287878 + MGP_WSBEiJ_P0071633 Cops4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071634.1 MGP_WSBEiJ_G0028975.1 mouse_genomes_project 5 101274872 101291699 + Cops4 protein_coding retained_intron MGP_WSBEiJ_T0073969.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141090674 141091467 - Gnb2 protein_coding retained_intron MGP_WSBEiJ_T0073970.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141090703 141094164 - MGP_WSBEiJ_P0073970 Gnb2 protein_coding protein_coding MGP_WSBEiJ_T0073971.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141091049 141095588 - MGP_WSBEiJ_P0073971 Gnb2 protein_coding protein_coding MGP_WSBEiJ_T0073972.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141091049 141095977 - MGP_WSBEiJ_P0073972 Gnb2 protein_coding protein_coding MGP_WSBEiJ_T0073973.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141091111 141093446 - Gnb2 protein_coding retained_intron MGP_WSBEiJ_T0073974.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141091318 141092409 - Gnb2 protein_coding retained_intron MGP_WSBEiJ_T0073975.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141091342 141092367 - Gnb2 protein_coding retained_intron MGP_WSBEiJ_T0073976.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141091419 141092323 - Gnb2 protein_coding retained_intron MGP_WSBEiJ_T0073977.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141091566 141093585 - MGP_WSBEiJ_P0073977 Gnb2 protein_coding protein_coding MGP_WSBEiJ_T0073978.1 MGP_WSBEiJ_G0029407.1 mouse_genomes_project 5 141091684 141094358 - MGP_WSBEiJ_P0073978 Gnb2 protein_coding protein_coding MGP_WSBEiJ_T0008074.1 MGP_WSBEiJ_G0006588.1 mouse_genomes_project 5 93216179 93222053 - 4932430I15Rik lincRNA lincRNA MGP_WSBEiJ_T0008051.1 MGP_WSBEiJ_G0006568.1 mouse_genomes_project 5 76575488 76587914 - 1700112J05Rik lincRNA lincRNA MGP_WSBEiJ_T0010552.1 MGP_WSBEiJ_G0008709.1 mouse_genomes_project 5 139564535 139564617 + Mir7035 miRNA miRNA MGP_WSBEiJ_T0004588.1 MGP_WSBEiJ_G0003973.1 mouse_genomes_project 5 33009556 33011132 - Gm43791 antisense antisense MGP_WSBEiJ_T0001508.1 MGP_WSBEiJ_G0001433.1 mouse_genomes_project 5 44004661 44008080 - TEC TEC MGP_WSBEiJ_T0014551.1 MGP_WSBEiJ_G0012681.1 mouse_genomes_project 5 57838820 57839774 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014594.1 MGP_WSBEiJ_G0012724.1 mouse_genomes_project 5 75923961 75924113 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073247.1 MGP_WSBEiJ_G0029278.1 mouse_genomes_project 5 127330041 127350560 + MGP_WSBEiJ_P0073247 Gtf2h3 protein_coding protein_coding MGP_WSBEiJ_T0073248.1 MGP_WSBEiJ_G0029278.1 mouse_genomes_project 5 127330043 127332569 + Gtf2h3 protein_coding retained_intron MGP_WSBEiJ_T0073249.1 MGP_WSBEiJ_G0029278.1 mouse_genomes_project 5 127330067 127345512 + Gtf2h3 protein_coding retained_intron MGP_WSBEiJ_T0073250.1 MGP_WSBEiJ_G0029278.1 mouse_genomes_project 5 127334748 127348477 + Gtf2h3 protein_coding retained_intron MGP_WSBEiJ_T0073251.1 MGP_WSBEiJ_G0029278.1 mouse_genomes_project 5 127343263 127349467 + Gtf2h3 protein_coding retained_intron MGP_WSBEiJ_T0073252.1 MGP_WSBEiJ_G0029278.1 mouse_genomes_project 5 127347144 127348486 + Gtf2h3 protein_coding retained_intron MGP_WSBEiJ_T0001630.1 MGP_WSBEiJ_G0001553.1 mouse_genomes_project 5 68416164 68417741 - TEC TEC MGP_WSBEiJ_T0008194.1 MGP_WSBEiJ_G0006667.1 mouse_genomes_project 5 118620261 118823152 - Gm43122 lincRNA lincRNA MGP_WSBEiJ_T0008196.1 MGP_WSBEiJ_G0006667.1 mouse_genomes_project 5 118810839 118823186 - Gm43122 lincRNA lincRNA MGP_WSBEiJ_T0014730.1 MGP_WSBEiJ_G0012860.1 mouse_genomes_project 5 142305304 142305855 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001480.1 MGP_WSBEiJ_G0001405.1 mouse_genomes_project 5 37755281 37758700 - TEC TEC MGP_WSBEiJ_T0072754.1 MGP_WSBEiJ_G0029203.1 mouse_genomes_project 5 123783779 123830609 + MGP_WSBEiJ_P0072754 Naa25 protein_coding protein_coding MGP_WSBEiJ_T0072755.1 MGP_WSBEiJ_G0029203.1 mouse_genomes_project 5 123783837 123827015 + MGP_WSBEiJ_P0072755 Naa25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072756.1 MGP_WSBEiJ_G0029203.1 mouse_genomes_project 5 123783838 123814729 + Naa25 protein_coding retained_intron MGP_WSBEiJ_T0072757.1 MGP_WSBEiJ_G0029203.1 mouse_genomes_project 5 123783848 123828126 + MGP_WSBEiJ_P0072757 Naa25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072759.1 MGP_WSBEiJ_G0029203.1 mouse_genomes_project 5 123827612 123832577 + MGP_WSBEiJ_P0072759 Naa25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072760.1 MGP_WSBEiJ_G0029203.1 mouse_genomes_project 5 123828197 123828711 + Naa25 protein_coding processed_transcript MGP_WSBEiJ_T0008293.1 MGP_WSBEiJ_G0006733.1 mouse_genomes_project 5 144471258 144472021 - Gm43703 lincRNA lincRNA MGP_WSBEiJ_T0071923.1 MGP_WSBEiJ_G0029038.1 mouse_genomes_project 5 109466926 109504853 + MGP_WSBEiJ_P0071923 Pigg protein_coding protein_coding MGP_WSBEiJ_T0071924.1 MGP_WSBEiJ_G0029038.1 mouse_genomes_project 5 109466926 109505975 + MGP_WSBEiJ_P0071924 Pigg protein_coding protein_coding MGP_WSBEiJ_T0071925.1 MGP_WSBEiJ_G0029038.1 mouse_genomes_project 5 109466953 109504858 + MGP_WSBEiJ_P0071925 Pigg protein_coding protein_coding MGP_WSBEiJ_T0073389.1 MGP_WSBEiJ_G0029305.1 mouse_genomes_project 5 132705168 132715026 - Sept14 protein_coding processed_transcript MGP_WSBEiJ_T0073390.1 MGP_WSBEiJ_G0029305.1 mouse_genomes_project 5 132705179 132727250 - MGP_WSBEiJ_P0073390 Sept14 protein_coding protein_coding MGP_WSBEiJ_T0073391.1 MGP_WSBEiJ_G0029305.1 mouse_genomes_project 5 132705216 132730555 - MGP_WSBEiJ_P0073391 Sept14 protein_coding protein_coding MGP_WSBEiJ_T0071269.1 MGP_WSBEiJ_G0028886.1 mouse_genomes_project 5 88107834 88109937 + MGP_WSBEiJ_P0071269 Cabs1 protein_coding protein_coding MGP_WSBEiJ_T0071100.1 MGP_WSBEiJ_G0028844.1 mouse_genomes_project 5 76860130 76881576 + MGP_WSBEiJ_P0071100 Rest protein_coding protein_coding MGP_WSBEiJ_T0071101.1 MGP_WSBEiJ_G0028844.1 mouse_genomes_project 5 76860835 76881576 + MGP_WSBEiJ_P0071101 Rest protein_coding protein_coding MGP_WSBEiJ_T0070797.1 MGP_WSBEiJ_G0028789.1 mouse_genomes_project 5 68355984 68607272 - MGP_WSBEiJ_P0070797 Kctd8 protein_coding protein_coding MGP_WSBEiJ_T0070798.1 MGP_WSBEiJ_G0028789.1 mouse_genomes_project 5 68554309 68607270 - MGP_WSBEiJ_P0070798 Kctd8 protein_coding protein_coding MGP_WSBEiJ_T0072240.1 MGP_WSBEiJ_G0029101.1 mouse_genomes_project 5 115414444 115419241 + MGP_WSBEiJ_P0072240 Ficd protein_coding protein_coding MGP_WSBEiJ_T0001475.1 MGP_WSBEiJ_G0001400.1 mouse_genomes_project 5 34951733 34951883 + TEC TEC MGP_WSBEiJ_T0008350.1 MGP_WSBEiJ_G0006775.1 mouse_genomes_project 5 155503284 155525374 - Gm43298 lincRNA lincRNA MGP_WSBEiJ_T0099601.1 MGP_WSBEiJ_G0038264.1 mouse_genomes_project 5 77269652 77269775 - Gm22011 snoRNA snoRNA MGP_WSBEiJ_T0014465.1 MGP_WSBEiJ_G0012595.1 mouse_genomes_project 5 20336027 20336624 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097219.1 MGP_WSBEiJ_G0035900.1 mouse_genomes_project 5 126178967 126179104 + Gm24682 scaRNA scaRNA MGP_WSBEiJ_T0073345.1 MGP_WSBEiJ_G0029297.1 mouse_genomes_project 5 131615537 131655847 + MGP_WSBEiJ_P0073345 Piwil1 protein_coding protein_coding MGP_WSBEiJ_T0073346.1 MGP_WSBEiJ_G0029297.1 mouse_genomes_project 5 131644762 131663971 + MGP_WSBEiJ_P0073346 Piwil1 protein_coding protein_coding MGP_WSBEiJ_T0073347.1 MGP_WSBEiJ_G0029297.1 mouse_genomes_project 5 131646078 131663078 + MGP_WSBEiJ_P0073347 Piwil1 protein_coding protein_coding MGP_WSBEiJ_T0069482.1 MGP_WSBEiJ_G0028581.1 mouse_genomes_project 5 28326951 28365104 + MGP_WSBEiJ_P0069482 Kcnk3 protein_coding protein_coding MGP_WSBEiJ_T0069483.1 MGP_WSBEiJ_G0028581.1 mouse_genomes_project 5 28361205 28362065 + Kcnk3 protein_coding processed_transcript MGP_WSBEiJ_T0073832.1 MGP_WSBEiJ_G0029381.1 mouse_genomes_project 5 139641141 139664509 - MGP_WSBEiJ_P0073832 Prkrip1 protein_coding protein_coding MGP_WSBEiJ_T0073833.1 MGP_WSBEiJ_G0029381.1 mouse_genomes_project 5 139645032 139664456 - Prkrip1 protein_coding processed_transcript MGP_WSBEiJ_T0073834.1 MGP_WSBEiJ_G0029381.1 mouse_genomes_project 5 139645370 139663368 - MGP_WSBEiJ_P0073834 Prkrip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073835.1 MGP_WSBEiJ_G0029381.1 mouse_genomes_project 5 139645375 139664454 - MGP_WSBEiJ_P0073835 Prkrip1 protein_coding protein_coding MGP_WSBEiJ_T0074193.1 MGP_WSBEiJ_G0029450.1 mouse_genomes_project 5 142681165 142700186 - MGP_WSBEiJ_P0074193 Pdgfa protein_coding protein_coding MGP_WSBEiJ_T0074194.1 MGP_WSBEiJ_G0029450.1 mouse_genomes_project 5 142681667 142700102 - MGP_WSBEiJ_P0074194 Pdgfa protein_coding protein_coding MGP_WSBEiJ_T0074195.1 MGP_WSBEiJ_G0029450.1 mouse_genomes_project 5 142682087 142703243 - MGP_WSBEiJ_P0074195 Pdgfa protein_coding protein_coding MGP_WSBEiJ_T0074196.1 MGP_WSBEiJ_G0029450.1 mouse_genomes_project 5 142682116 142704526 - MGP_WSBEiJ_P0074196 Pdgfa protein_coding protein_coding MGP_WSBEiJ_T0074197.1 MGP_WSBEiJ_G0029450.1 mouse_genomes_project 5 142682290 142699430 - Pdgfa protein_coding processed_transcript MGP_WSBEiJ_T0074198.1 MGP_WSBEiJ_G0029450.1 mouse_genomes_project 5 142691424 142699633 - Pdgfa protein_coding processed_transcript MGP_WSBEiJ_T0074199.1 MGP_WSBEiJ_G0029450.1 mouse_genomes_project 5 142693595 142703157 - Pdgfa protein_coding processed_transcript MGP_WSBEiJ_T0074522.1 MGP_WSBEiJ_G0029520.1 mouse_genomes_project 5 148157146 148249330 + MGP_WSBEiJ_P0074522 Lmtk2 protein_coding protein_coding MGP_WSBEiJ_T0014631.1 MGP_WSBEiJ_G0012761.1 mouse_genomes_project 5 92767924 92769521 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099626.1 MGP_WSBEiJ_G0038289.1 mouse_genomes_project 5 151171533 151171662 + Gm23202 snoRNA snoRNA MGP_WSBEiJ_T0001846.1 MGP_WSBEiJ_G0001766.1 mouse_genomes_project 5 142313857 142315328 + TEC TEC MGP_WSBEiJ_T0069850.1 MGP_WSBEiJ_G0028636.1 mouse_genomes_project 5 31511791 31543924 - MGP_WSBEiJ_P0069850 Fam53a protein_coding protein_coding MGP_WSBEiJ_T0069851.1 MGP_WSBEiJ_G0028636.1 mouse_genomes_project 5 31511800 31543201 - MGP_WSBEiJ_P0069851 Fam53a protein_coding protein_coding MGP_WSBEiJ_T0069852.1 MGP_WSBEiJ_G0028636.1 mouse_genomes_project 5 31511800 31543911 - MGP_WSBEiJ_P0069852 Fam53a protein_coding protein_coding MGP_WSBEiJ_T0069853.1 MGP_WSBEiJ_G0028636.1 mouse_genomes_project 5 31511800 31543877 - MGP_WSBEiJ_P0069853 Fam53a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069854.1 MGP_WSBEiJ_G0028636.1 mouse_genomes_project 5 31519658 31543872 - MGP_WSBEiJ_P0069854 Fam53a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069855.1 MGP_WSBEiJ_G0028636.1 mouse_genomes_project 5 31519831 31543888 - MGP_WSBEiJ_P0069855 Fam53a protein_coding protein_coding MGP_WSBEiJ_T0069856.1 MGP_WSBEiJ_G0028636.1 mouse_genomes_project 5 31521903 31543351 - MGP_WSBEiJ_P0069856 Fam53a protein_coding protein_coding MGP_WSBEiJ_T0069857.1 MGP_WSBEiJ_G0028636.1 mouse_genomes_project 5 31526093 31543894 - Fam53a protein_coding processed_transcript MGP_WSBEiJ_T0001562.1 MGP_WSBEiJ_G0001486.1 mouse_genomes_project 5 56160044 56162727 + TEC TEC MGP_WSBEiJ_T0069217.1 MGP_WSBEiJ_G0028526.1 mouse_genomes_project 5 21858758 21890769 - MGP_WSBEiJ_P0069217 Kcnh2 protein_coding protein_coding MGP_WSBEiJ_T0069218.1 MGP_WSBEiJ_G0028526.1 mouse_genomes_project 5 21858758 21868766 - MGP_WSBEiJ_P0069218 Kcnh2 protein_coding protein_coding MGP_WSBEiJ_T0069219.1 MGP_WSBEiJ_G0028526.1 mouse_genomes_project 5 21859252 21861427 - Kcnh2 protein_coding processed_transcript MGP_WSBEiJ_T0069220.1 MGP_WSBEiJ_G0028526.1 mouse_genomes_project 5 21863677 21864977 - Kcnh2 protein_coding processed_transcript MGP_WSBEiJ_T0069221.1 MGP_WSBEiJ_G0028526.1 mouse_genomes_project 5 21864635 21865707 - Kcnh2 protein_coding processed_transcript MGP_WSBEiJ_T0001716.1 MGP_WSBEiJ_G0001638.1 mouse_genomes_project 5 112681314 112681854 + TEC TEC MGP_WSBEiJ_T0068872.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2474326 2495256 - MGP_WSBEiJ_P0068872 Gtpbp10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0068873.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2475452 2495304 - MGP_WSBEiJ_P0068873 Gtpbp10 protein_coding protein_coding MGP_WSBEiJ_T0068874.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2477903 2480193 - Gtpbp10 protein_coding retained_intron MGP_WSBEiJ_T0068875.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2477923 2479448 - Gtpbp10 protein_coding retained_intron MGP_WSBEiJ_T0068876.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2478340 2493033 - MGP_WSBEiJ_P0068876 Gtpbp10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068877.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2480067 2495252 - MGP_WSBEiJ_P0068877 Gtpbp10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068878.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2480111 2491545 - Gtpbp10 protein_coding retained_intron MGP_WSBEiJ_T0068879.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2480148 2483270 - Gtpbp10 protein_coding retained_intron MGP_WSBEiJ_T0068880.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2482351 2495273 - MGP_WSBEiJ_P0068880 Gtpbp10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068881.1 MGP_WSBEiJ_G0028467.1 mouse_genomes_project 5 2494659 2495307 - MGP_WSBEiJ_P0068881 Gtpbp10 protein_coding protein_coding MGP_WSBEiJ_T0070134.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34540484 34634973 - MGP_WSBEiJ_P0070134 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070135.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34540484 34627493 - MGP_WSBEiJ_P0070135 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070136.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34540484 34635567 - MGP_WSBEiJ_P0070136 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070137.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34540485 34584693 - MGP_WSBEiJ_P0070137 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070138.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34540488 34634962 - MGP_WSBEiJ_P0070138 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070139.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34540488 34585673 - MGP_WSBEiJ_P0070139 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070140.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34542501 34557958 - MGP_WSBEiJ_P0070140 Tbc1d14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070141.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34542619 34639435 - MGP_WSBEiJ_P0070141 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070142.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34542621 34639427 - MGP_WSBEiJ_P0070142 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070143.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34542626 34543298 - Tbc1d14 protein_coding processed_transcript MGP_WSBEiJ_T0070144.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34542826 34624708 - MGP_WSBEiJ_P0070144 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070145.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34542894 34584618 - MGP_WSBEiJ_P0070145 Tbc1d14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070146.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34545046 34571851 - Tbc1d14 protein_coding retained_intron MGP_WSBEiJ_T0070147.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34570661 34584589 - MGP_WSBEiJ_P0070147 Tbc1d14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070148.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34577833 34584577 - Tbc1d14 protein_coding processed_transcript MGP_WSBEiJ_T0070149.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34595392 34635560 - Tbc1d14 protein_coding retained_intron MGP_WSBEiJ_T0070150.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34597279 34617244 - Tbc1d14 protein_coding processed_transcript MGP_WSBEiJ_T0070151.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34597341 34626661 - MGP_WSBEiJ_P0070151 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070152.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34624343 34639394 - Tbc1d14 protein_coding retained_intron MGP_WSBEiJ_T0070153.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34624707 34639394 - MGP_WSBEiJ_P0070153 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070154.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34624756 34626432 - MGP_WSBEiJ_P0070154 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070155.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34624951 34647237 - MGP_WSBEiJ_P0070155 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0070156.1 MGP_WSBEiJ_G0028680.1 mouse_genomes_project 5 34625179 34647262 - MGP_WSBEiJ_P0070156 Tbc1d14 protein_coding protein_coding MGP_WSBEiJ_T0073348.1 MGP_WSBEiJ_G0029298.1 mouse_genomes_project 5 131666289 131766540 - MGP_WSBEiJ_P0073348 Rimbp2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0073349.1 MGP_WSBEiJ_G0029298.1 mouse_genomes_project 5 131666291 131735422 - MGP_WSBEiJ_P0073349 Rimbp2 protein_coding protein_coding MGP_WSBEiJ_T0073350.1 MGP_WSBEiJ_G0029298.1 mouse_genomes_project 5 131666295 131735375 - MGP_WSBEiJ_P0073350 Rimbp2 protein_coding protein_coding MGP_WSBEiJ_T0073351.1 MGP_WSBEiJ_G0029298.1 mouse_genomes_project 5 131668903 131889514 - MGP_WSBEiJ_P0073351 Rimbp2 protein_coding protein_coding MGP_WSBEiJ_T0073352.1 MGP_WSBEiJ_G0029298.1 mouse_genomes_project 5 131668903 131889663 - MGP_WSBEiJ_P0073352 Rimbp2 protein_coding protein_coding MGP_WSBEiJ_T0073353.1 MGP_WSBEiJ_G0029298.1 mouse_genomes_project 5 131669192 131889787 - MGP_WSBEiJ_P0073353 Rimbp2 protein_coding protein_coding MGP_WSBEiJ_T0073354.1 MGP_WSBEiJ_G0029298.1 mouse_genomes_project 5 131719622 131801023 - MGP_WSBEiJ_P0073354 Rimbp2 protein_coding protein_coding MGP_WSBEiJ_T0073355.1 MGP_WSBEiJ_G0029298.1 mouse_genomes_project 5 131757333 131889492 - Rimbp2 protein_coding processed_transcript MGP_WSBEiJ_T0074671.1 MGP_WSBEiJ_G0029555.1 mouse_genomes_project 5 151181275 151183963 + MGP_WSBEiJ_P0074671 Rasl11a protein_coding protein_coding MGP_WSBEiJ_T0074672.1 MGP_WSBEiJ_G0029555.1 mouse_genomes_project 5 151181953 151183622 + Rasl11a protein_coding retained_intron MGP_WSBEiJ_T0008276.1 MGP_WSBEiJ_G0006719.1 mouse_genomes_project 5 138270390 138271243 + 4933439J24Rik lincRNA lincRNA MGP_WSBEiJ_T0014413.1 MGP_WSBEiJ_G0012543.1 mouse_genomes_project 5 2503918 2504348 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072470.1 MGP_WSBEiJ_G0029145.1 mouse_genomes_project 5 117197424 117205369 - MGP_WSBEiJ_P0072470 Gatc protein_coding protein_coding MGP_WSBEiJ_T0069175.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 20964715 21087863 - MGP_WSBEiJ_P0069175 Srpk2 protein_coding protein_coding MGP_WSBEiJ_T0069176.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 20966913 21153639 - MGP_WSBEiJ_P0069176 Srpk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069177.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 20992058 21009666 - Srpk2 protein_coding processed_transcript MGP_WSBEiJ_T0069178.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 20994262 21153205 - MGP_WSBEiJ_P0069178 Srpk2 protein_coding protein_coding MGP_WSBEiJ_T0069179.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 21012699 21153158 - Srpk2 protein_coding retained_intron MGP_WSBEiJ_T0069180.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 21015097 21017509 - Srpk2 protein_coding retained_intron MGP_WSBEiJ_T0069181.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 21015493 21163281 - MGP_WSBEiJ_P0069181 Srpk2 protein_coding protein_coding MGP_WSBEiJ_T0069182.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 21034434 21153546 - MGP_WSBEiJ_P0069182 Srpk2 protein_coding protein_coding MGP_WSBEiJ_T0069183.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 21034539 21163264 - MGP_WSBEiJ_P0069183 Srpk2 protein_coding protein_coding MGP_WSBEiJ_T0069184.1 MGP_WSBEiJ_G0028519.1 mouse_genomes_project 5 21086055 21087884 - Srpk2 protein_coding retained_intron MGP_WSBEiJ_T0070876.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72092645 72212187 - MGP_WSBEiJ_P0070876 Tec protein_coding protein_coding MGP_WSBEiJ_T0070877.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72092652 72212202 - MGP_WSBEiJ_P0070877 Tec protein_coding protein_coding MGP_WSBEiJ_T0070878.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72092663 72212139 - MGP_WSBEiJ_P0070878 Tec protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070879.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72092667 72123498 - MGP_WSBEiJ_P0070879 Tec protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070880.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72092667 72212189 - MGP_WSBEiJ_P0070880 Tec protein_coding protein_coding MGP_WSBEiJ_T0070881.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72092667 72212226 - MGP_WSBEiJ_P0070881 Tec protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070882.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72110280 72212192 - MGP_WSBEiJ_P0070882 Tec protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070883.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72161187 72212186 - Tec protein_coding retained_intron MGP_WSBEiJ_T0070884.1 MGP_WSBEiJ_G0028807.1 mouse_genomes_project 5 72161490 72184349 - MGP_WSBEiJ_P0070884 Tec protein_coding protein_coding MGP_WSBEiJ_T0001492.1 MGP_WSBEiJ_G0001417.1 mouse_genomes_project 5 42319201 42320892 + TEC TEC MGP_WSBEiJ_T0008214.1 MGP_WSBEiJ_G0006683.1 mouse_genomes_project 5 122113847 122117060 + lincRNA lincRNA MGP_WSBEiJ_T0069382.1 MGP_WSBEiJ_G0028560.1 mouse_genomes_project 5 26003486 26042012 + MGP_WSBEiJ_P0069382 Rbm33 protein_coding non_stop_decay MGP_WSBEiJ_T0069383.1 MGP_WSBEiJ_G0028560.1 mouse_genomes_project 5 26003542 26107744 + MGP_WSBEiJ_P0069383 Rbm33 protein_coding protein_coding MGP_WSBEiJ_T0069384.1 MGP_WSBEiJ_G0028560.1 mouse_genomes_project 5 26003542 26104615 + MGP_WSBEiJ_P0069384 Rbm33 protein_coding protein_coding MGP_WSBEiJ_T0069385.1 MGP_WSBEiJ_G0028560.1 mouse_genomes_project 5 26003567 26044892 + MGP_WSBEiJ_P0069385 Rbm33 protein_coding protein_coding MGP_WSBEiJ_T0069386.1 MGP_WSBEiJ_G0028560.1 mouse_genomes_project 5 26082096 26102187 + MGP_WSBEiJ_P0069386 Rbm33 protein_coding protein_coding MGP_WSBEiJ_T0069387.1 MGP_WSBEiJ_G0028560.1 mouse_genomes_project 5 26099170 26102539 + MGP_WSBEiJ_P0069387 Rbm33 protein_coding protein_coding MGP_WSBEiJ_T0001486.1 MGP_WSBEiJ_G0001411.1 mouse_genomes_project 5 41753785 41755889 + TEC TEC MGP_WSBEiJ_T0008052.1 MGP_WSBEiJ_G0006569.1 mouse_genomes_project 5 76690928 76697426 - Gm15831 lincRNA lincRNA MGP_WSBEiJ_T0004757.1 MGP_WSBEiJ_G0004094.1 mouse_genomes_project 5 127418776 127421858 - 4930404A12Rik antisense antisense MGP_WSBEiJ_T0004758.1 MGP_WSBEiJ_G0004094.1 mouse_genomes_project 5 127418777 127421858 - 4930404A12Rik antisense antisense MGP_WSBEiJ_T0074314.1 MGP_WSBEiJ_G0029474.1 mouse_genomes_project 5 144179730 144233426 - MGP_WSBEiJ_P0074314 Snx8 protein_coding protein_coding MGP_WSBEiJ_T0074315.1 MGP_WSBEiJ_G0029474.1 mouse_genomes_project 5 144179735 144202839 - MGP_WSBEiJ_P0074315 Snx8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074316.1 MGP_WSBEiJ_G0029474.1 mouse_genomes_project 5 144195212 144195971 - Snx8 protein_coding retained_intron MGP_WSBEiJ_T0074317.1 MGP_WSBEiJ_G0029474.1 mouse_genomes_project 5 144195888 144210587 - MGP_WSBEiJ_P0074317 Snx8 protein_coding protein_coding MGP_WSBEiJ_T0074318.1 MGP_WSBEiJ_G0029474.1 mouse_genomes_project 5 144195904 144233426 - MGP_WSBEiJ_P0074318 Snx8 protein_coding protein_coding MGP_WSBEiJ_T0100869.1 MGP_WSBEiJ_G0039327.1 mouse_genomes_project 5 140538655 140542526 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001707.1 MGP_WSBEiJ_G0001629.1 mouse_genomes_project 5 108787882 108788879 + TEC TEC MGP_WSBEiJ_T0014519.1 MGP_WSBEiJ_G0012649.1 mouse_genomes_project 5 40035331 40036224 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014442.1 MGP_WSBEiJ_G0012572.1 mouse_genomes_project 5 16776166 16777929 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069687.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29014355 29053243 - MGP_WSBEiJ_P0069687 Ift172 protein_coding protein_coding MGP_WSBEiJ_T0069688.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29014358 29015732 - Ift172 protein_coding retained_intron MGP_WSBEiJ_T0069689.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29014631 29015889 - Ift172 protein_coding retained_intron MGP_WSBEiJ_T0069690.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29022085 29022851 - Ift172 protein_coding retained_intron MGP_WSBEiJ_T0069691.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29022959 29025528 - Ift172 protein_coding retained_intron MGP_WSBEiJ_T0069692.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29024436 29025236 - Ift172 protein_coding retained_intron MGP_WSBEiJ_T0069693.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29027945 29042565 - MGP_WSBEiJ_P0069693 Ift172 protein_coding protein_coding MGP_WSBEiJ_T0069694.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29033814 29043586 - MGP_WSBEiJ_P0069694 Ift172 protein_coding protein_coding MGP_WSBEiJ_T0069695.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29037653 29053175 - Ift172 protein_coding retained_intron MGP_WSBEiJ_T0069696.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29047610 29048723 - Ift172 protein_coding retained_intron MGP_WSBEiJ_T0069697.1 MGP_WSBEiJ_G0028611.1 mouse_genomes_project 5 29048250 29053252 - MGP_WSBEiJ_P0069697 Ift172 protein_coding protein_coding MGP_WSBEiJ_T0001739.1 MGP_WSBEiJ_G0001661.1 mouse_genomes_project 5 118428077 118429371 - TEC TEC MGP_WSBEiJ_T0001527.1 MGP_WSBEiJ_G0001451.1 mouse_genomes_project 5 47339027 47339855 - TEC TEC MGP_WSBEiJ_T0004702.1 MGP_WSBEiJ_G0004056.1 mouse_genomes_project 5 115309578 115310298 + Gm15736 antisense antisense MGP_WSBEiJ_T0071242.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87884661 87898860 + MGP_WSBEiJ_P0071242 Csn1s2a protein_coding protein_coding MGP_WSBEiJ_T0071243.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87884661 87898860 + MGP_WSBEiJ_P0071243 Csn1s2a protein_coding protein_coding MGP_WSBEiJ_T0071244.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87884661 87898761 + MGP_WSBEiJ_P0071244 Csn1s2a protein_coding protein_coding MGP_WSBEiJ_T0071245.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87884675 87898761 + MGP_WSBEiJ_P0071245 Csn1s2a protein_coding protein_coding MGP_WSBEiJ_T0071246.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87884676 87890689 + Csn1s2a protein_coding retained_intron MGP_WSBEiJ_T0071247.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87885878 87888910 + Csn1s2a protein_coding retained_intron MGP_WSBEiJ_T0071248.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87887567 87890501 + Csn1s2a protein_coding retained_intron MGP_WSBEiJ_T0071249.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87889710 87891946 + Csn1s2a protein_coding retained_intron MGP_WSBEiJ_T0071250.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87891916 87898839 + Csn1s2a protein_coding retained_intron MGP_WSBEiJ_T0071251.1 MGP_WSBEiJ_G0028879.1 mouse_genomes_project 5 87895220 87897163 + Csn1s2a protein_coding retained_intron MGP_WSBEiJ_T0070612.1 MGP_WSBEiJ_G0028763.1 mouse_genomes_project 5 64430494 64468535 + MGP_WSBEiJ_P0070612 Klb protein_coding protein_coding MGP_WSBEiJ_T0070613.1 MGP_WSBEiJ_G0028763.1 mouse_genomes_project 5 64430587 64432427 + Klb protein_coding retained_intron MGP_WSBEiJ_T0070614.1 MGP_WSBEiJ_G0028763.1 mouse_genomes_project 5 64430588 64463106 + MGP_WSBEiJ_P0070614 Klb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014415.1 MGP_WSBEiJ_G0012545.1 mouse_genomes_project 5 3599817 3600107 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073341.1 MGP_WSBEiJ_G0029295.1 mouse_genomes_project 5 130646193 131319887 - MGP_WSBEiJ_P0073341 Tmem132d protein_coding protein_coding MGP_WSBEiJ_T0073342.1 MGP_WSBEiJ_G0029295.1 mouse_genomes_project 5 131150749 131157823 - Tmem132d protein_coding processed_transcript MGP_WSBEiJ_T0073343.1 MGP_WSBEiJ_G0029295.1 mouse_genomes_project 5 131150854 131157761 - Tmem132d protein_coding processed_transcript MGP_WSBEiJ_T0001753.1 MGP_WSBEiJ_G0001675.1 mouse_genomes_project 5 121770010 121773705 - TEC TEC MGP_WSBEiJ_T0008185.1 MGP_WSBEiJ_G0006660.1 mouse_genomes_project 5 117225671 117269162 + Gm13832 lincRNA lincRNA MGP_WSBEiJ_T0008186.1 MGP_WSBEiJ_G0006660.1 mouse_genomes_project 5 117225690 117296540 + Gm13832 lincRNA lincRNA MGP_WSBEiJ_T0014479.1 MGP_WSBEiJ_G0012609.1 mouse_genomes_project 5 24465942 24466348 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098372.1 MGP_WSBEiJ_G0037035.1 mouse_genomes_project 5 107103264 107103371 - Gm25672 snRNA snRNA MGP_WSBEiJ_T0100863.1 MGP_WSBEiJ_G0039321.1 mouse_genomes_project 5 100929822 101090806 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007978.1 MGP_WSBEiJ_G0006508.1 mouse_genomes_project 5 36066229 36068607 + Gm42505 lincRNA lincRNA MGP_WSBEiJ_T0100859.1 MGP_WSBEiJ_G0039317.1 mouse_genomes_project 5 87428192 87441347 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001430.1 MGP_WSBEiJ_G0001358.1 mouse_genomes_project 5 18370598 18371931 + TEC TEC MGP_WSBEiJ_T0072773.1 MGP_WSBEiJ_G0029208.1 mouse_genomes_project 5 123913442 123941838 - MGP_WSBEiJ_P0072773 Gm42878 protein_coding protein_coding MGP_WSBEiJ_T0072774.1 MGP_WSBEiJ_G0029208.1 mouse_genomes_project 5 123913442 123941838 - MGP_WSBEiJ_P0072774 Gm42878 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014641.1 MGP_WSBEiJ_G0012771.1 mouse_genomes_project 5 101255839 101256273 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098338.1 MGP_WSBEiJ_G0037001.1 mouse_genomes_project 5 34692240 34692344 - Gm24878 snRNA snRNA MGP_WSBEiJ_T0004804.1 MGP_WSBEiJ_G0004128.1 mouse_genomes_project 5 147962524 148027188 - Gm17135 antisense antisense MGP_WSBEiJ_T0070288.1 MGP_WSBEiJ_G0028704.1 mouse_genomes_project 5 36810998 36991853 - MGP_WSBEiJ_P0070288 Clnk protein_coding protein_coding MGP_WSBEiJ_T0070289.1 MGP_WSBEiJ_G0028704.1 mouse_genomes_project 5 36810998 36991853 - MGP_WSBEiJ_P0070289 Clnk protein_coding protein_coding MGP_WSBEiJ_T0001660.1 MGP_WSBEiJ_G0001582.1 mouse_genomes_project 5 75325148 75327268 + TEC TEC MGP_WSBEiJ_T0008313.1 MGP_WSBEiJ_G0006750.1 mouse_genomes_project 5 153198047 153205043 + Gm36186 lincRNA lincRNA MGP_WSBEiJ_T0071491.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93527453 93610071 + MGP_WSBEiJ_P0071491 Sept11 protein_coding protein_coding MGP_WSBEiJ_T0071492.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93527454 93528094 + Sept11 protein_coding retained_intron MGP_WSBEiJ_T0071493.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93527454 93605087 + MGP_WSBEiJ_P0071493 Sept11 protein_coding protein_coding MGP_WSBEiJ_T0071494.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93527464 93596549 + MGP_WSBEiJ_P0071494 Sept11 protein_coding protein_coding MGP_WSBEiJ_T0071495.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93527467 93611550 + MGP_WSBEiJ_P0071495 Sept11 protein_coding protein_coding MGP_WSBEiJ_T0071496.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93527542 93611560 + MGP_WSBEiJ_P0071496 Sept11 protein_coding protein_coding MGP_WSBEiJ_T0071497.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93527552 93583873 + MGP_WSBEiJ_P0071497 Sept11 protein_coding protein_coding MGP_WSBEiJ_T0071498.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93527587 93611190 + MGP_WSBEiJ_P0071498 Sept11 protein_coding protein_coding MGP_WSBEiJ_T0071499.1 MGP_WSBEiJ_G0028946.1 mouse_genomes_project 5 93583832 93592973 + Sept11 protein_coding retained_intron MGP_WSBEiJ_T0097428.1 MGP_WSBEiJ_G0036101.1 mouse_genomes_project 5 140379172 140386577 - Gm20485 sense_intronic sense_intronic MGP_WSBEiJ_T0010535.1 MGP_WSBEiJ_G0008692.1 mouse_genomes_project 5 116152019 116152091 + Mir7027 miRNA miRNA MGP_WSBEiJ_T0001607.1 MGP_WSBEiJ_G0001530.1 mouse_genomes_project 5 65234491 65238745 - TEC TEC MGP_WSBEiJ_T0070028.1 MGP_WSBEiJ_G0028660.1 mouse_genomes_project 5 32733752 32798937 + Htt protein_coding retained_intron MGP_WSBEiJ_T0070029.1 MGP_WSBEiJ_G0028660.1 mouse_genomes_project 5 32733756 32884859 + MGP_WSBEiJ_P0070029 Htt protein_coding protein_coding MGP_WSBEiJ_T0070030.1 MGP_WSBEiJ_G0028660.1 mouse_genomes_project 5 32733773 32790871 + Htt protein_coding retained_intron MGP_WSBEiJ_T0070031.1 MGP_WSBEiJ_G0028660.1 mouse_genomes_project 5 32772158 32774772 + Htt protein_coding retained_intron MGP_WSBEiJ_T0070032.1 MGP_WSBEiJ_G0028660.1 mouse_genomes_project 5 32783107 32788173 + Htt protein_coding retained_intron MGP_WSBEiJ_T0070033.1 MGP_WSBEiJ_G0028660.1 mouse_genomes_project 5 32786388 32788659 + Htt protein_coding retained_intron MGP_WSBEiJ_T0070034.1 MGP_WSBEiJ_G0028660.1 mouse_genomes_project 5 32848848 32856635 + Htt protein_coding retained_intron MGP_WSBEiJ_T0070035.1 MGP_WSBEiJ_G0028660.1 mouse_genomes_project 5 32858107 32875322 + Htt protein_coding retained_intron MGP_WSBEiJ_T0069746.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29390701 29453787 + Mrpl33 protein_coding processed_transcript MGP_WSBEiJ_T0069747.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29392489 29419022 + Mrpl33 protein_coding processed_transcript MGP_WSBEiJ_T0069748.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29408340 29419022 + MGP_WSBEiJ_P0069748 Mrpl33 protein_coding protein_coding MGP_WSBEiJ_T0069749.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29408357 29440716 + Mrpl33 protein_coding processed_transcript MGP_WSBEiJ_T0069750.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29408373 29453787 + Mrpl33 protein_coding processed_transcript MGP_WSBEiJ_T0069751.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29408386 29463306 + MGP_WSBEiJ_P0069751 Mrpl33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069752.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29408414 29419020 + Mrpl33 protein_coding retained_intron MGP_WSBEiJ_T0069753.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29408418 29419015 + Mrpl33 protein_coding processed_transcript MGP_WSBEiJ_T0069754.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29408553 29418950 + Mrpl33 protein_coding retained_intron MGP_WSBEiJ_T0069757.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29453550 29457055 + Mrpl33 protein_coding processed_transcript MGP_WSBEiJ_T0069758.1 MGP_WSBEiJ_G0028619.1 mouse_genomes_project 5 29454421 29462349 + Mrpl33 protein_coding processed_transcript MGP_WSBEiJ_T0071112.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80784506 81169901 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0071113.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80786239 81583230 + MGP_WSBEiJ_P0071113 Adgrl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071114.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80786418 81475415 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0071115.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80786421 81475412 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0071116.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80786662 80836125 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0071117.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80786865 81256168 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0071118.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80786868 81579015 + MGP_WSBEiJ_P0071118 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071119.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80786906 81583241 + MGP_WSBEiJ_P0071119 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071120.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80787259 81583231 + MGP_WSBEiJ_P0071120 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071121.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80787457 80976410 + Adgrl3 protein_coding processed_transcript MGP_WSBEiJ_T0071122.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80787458 81583230 + Adgrl3 protein_coding processed_transcript MGP_WSBEiJ_T0071123.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 80787476 81356310 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0071124.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81090774 81581631 + MGP_WSBEiJ_P0071124 Adgrl3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071125.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093680 81581915 + MGP_WSBEiJ_P0071125 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071126.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093681 81581915 + MGP_WSBEiJ_P0071126 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071127.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093681 81581915 + MGP_WSBEiJ_P0071127 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071128.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093681 81581915 + MGP_WSBEiJ_P0071128 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071129.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093681 81581915 + MGP_WSBEiJ_P0071129 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071130.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093681 81581915 + MGP_WSBEiJ_P0071130 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071131.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093681 81581915 + MGP_WSBEiJ_P0071131 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071132.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093681 81581915 + MGP_WSBEiJ_P0071132 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071133.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093681 81581915 + MGP_WSBEiJ_P0071133 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071134.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093689 81131978 + Adgrl3 protein_coding processed_transcript MGP_WSBEiJ_T0071135.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093719 81582459 + MGP_WSBEiJ_P0071135 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071136.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093719 81581784 + MGP_WSBEiJ_P0071136 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071137.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093719 81581784 + MGP_WSBEiJ_P0071137 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071138.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093719 81581784 + MGP_WSBEiJ_P0071138 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071139.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093744 81582288 + MGP_WSBEiJ_P0071139 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071140.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093832 81583230 + MGP_WSBEiJ_P0071140 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071141.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81093832 81583230 + MGP_WSBEiJ_P0071141 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071142.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81430934 81475194 + Adgrl3 protein_coding processed_transcript MGP_WSBEiJ_T0071143.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81445636 81447900 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0071144.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81445995 81583230 + MGP_WSBEiJ_P0071144 Adgrl3 protein_coding protein_coding MGP_WSBEiJ_T0071145.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81506336 81508443 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0071146.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81557770 81613434 + Adgrl3 protein_coding processed_transcript MGP_WSBEiJ_T0071147.1 MGP_WSBEiJ_G0028849.1 mouse_genomes_project 5 81577592 81579634 + Adgrl3 protein_coding retained_intron MGP_WSBEiJ_T0097068.1 MGP_WSBEiJ_G0035749.1 mouse_genomes_project 5 91214911 91215028 + Gm22816 rRNA rRNA MGP_WSBEiJ_T0072121.1 MGP_WSBEiJ_G0029075.1 mouse_genomes_project 5 112295709 112310278 - MGP_WSBEiJ_P0072121 Hscb protein_coding protein_coding MGP_WSBEiJ_T0072122.1 MGP_WSBEiJ_G0029075.1 mouse_genomes_project 5 112295719 112310076 - MGP_WSBEiJ_P0072122 Hscb protein_coding protein_coding MGP_WSBEiJ_T0072123.1 MGP_WSBEiJ_G0029075.1 mouse_genomes_project 5 112295719 112305471 - MGP_WSBEiJ_P0072123 Hscb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072124.1 MGP_WSBEiJ_G0029075.1 mouse_genomes_project 5 112295720 112304042 - Hscb protein_coding retained_intron MGP_WSBEiJ_T0070036.1 MGP_WSBEiJ_G0028661.1 mouse_genomes_project 5 32879539 32890141 + Msantd1 protein_coding processed_transcript MGP_WSBEiJ_T0070037.1 MGP_WSBEiJ_G0028661.1 mouse_genomes_project 5 32887412 32899318 + MGP_WSBEiJ_P0070037 Msantd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0070038.1 MGP_WSBEiJ_G0028661.1 mouse_genomes_project 5 32888239 32896167 + MGP_WSBEiJ_P0070038 Msantd1 protein_coding protein_coding MGP_WSBEiJ_T0070039.1 MGP_WSBEiJ_G0028661.1 mouse_genomes_project 5 32889863 32896018 + MGP_WSBEiJ_P0070039 Msantd1 protein_coding protein_coding MGP_WSBEiJ_T0097421.1 MGP_WSBEiJ_G0036095.1 mouse_genomes_project 5 118551454 118553582 - sense_intronic sense_intronic MGP_WSBEiJ_T0099583.1 MGP_WSBEiJ_G0038246.1 mouse_genomes_project 5 18456409 18456528 - Gm22490 snoRNA snoRNA MGP_WSBEiJ_T0098325.1 MGP_WSBEiJ_G0036988.1 mouse_genomes_project 5 17396581 17396685 + Gm23570 snRNA snRNA MGP_WSBEiJ_T0071369.1 MGP_WSBEiJ_G0028920.1 mouse_genomes_project 5 91225363 91227426 + MGP_WSBEiJ_P0071369 Cxcl2 protein_coding protein_coding MGP_WSBEiJ_T0071370.1 MGP_WSBEiJ_G0028920.1 mouse_genomes_project 5 91225365 91227426 + Cxcl2 protein_coding retained_intron MGP_WSBEiJ_T0071371.1 MGP_WSBEiJ_G0028920.1 mouse_genomes_project 5 91225365 91225854 + Cxcl2 protein_coding retained_intron MGP_WSBEiJ_T0071372.1 MGP_WSBEiJ_G0028920.1 mouse_genomes_project 5 91225365 91227426 + MGP_WSBEiJ_P0071372 Cxcl2 protein_coding protein_coding MGP_WSBEiJ_T0001655.1 MGP_WSBEiJ_G0001577.1 mouse_genomes_project 5 73853027 73854633 - TEC TEC MGP_WSBEiJ_T0004696.1 MGP_WSBEiJ_G0004053.1 mouse_genomes_project 5 112874935 112875710 - Gm43118 antisense antisense MGP_WSBEiJ_T0010563.1 MGP_WSBEiJ_G0008720.1 mouse_genomes_project 5 143552987 143553052 - Mir7037 miRNA miRNA MGP_WSBEiJ_T0001786.1 MGP_WSBEiJ_G0001707.1 mouse_genomes_project 5 128077980 128080740 - TEC TEC MGP_WSBEiJ_T0070796.1 MGP_WSBEiJ_G0028788.1 mouse_genomes_project 5 67264791 67391417 + MGP_WSBEiJ_P0070796 Grxcr1 protein_coding protein_coding MGP_WSBEiJ_T0071504.1 MGP_WSBEiJ_G0028948.1 mouse_genomes_project 5 93642620 93649630 + MGP_WSBEiJ_P0071504 2010109A12Rik protein_coding protein_coding MGP_WSBEiJ_T0071505.1 MGP_WSBEiJ_G0028948.1 mouse_genomes_project 5 93642635 93643552 + 2010109A12Rik protein_coding retained_intron MGP_WSBEiJ_T0014677.1 MGP_WSBEiJ_G0012807.1 mouse_genomes_project 5 111762411 111762730 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070828.1 MGP_WSBEiJ_G0028796.1 mouse_genomes_project 5 70821892 70910099 - MGP_WSBEiJ_P0070828 Gabra4 protein_coding protein_coding MGP_WSBEiJ_T0070829.1 MGP_WSBEiJ_G0028796.1 mouse_genomes_project 5 70823344 70909772 - MGP_WSBEiJ_P0070829 Gabra4 protein_coding protein_coding MGP_WSBEiJ_T0070830.1 MGP_WSBEiJ_G0028796.1 mouse_genomes_project 5 70823749 70909681 - MGP_WSBEiJ_P0070830 Gabra4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070831.1 MGP_WSBEiJ_G0028796.1 mouse_genomes_project 5 70824198 70909666 - MGP_WSBEiJ_P0070831 Gabra4 protein_coding protein_coding MGP_WSBEiJ_T0070832.1 MGP_WSBEiJ_G0028796.1 mouse_genomes_project 5 70906986 70909611 - Gabra4 protein_coding retained_intron MGP_WSBEiJ_T0072517.1 MGP_WSBEiJ_G0029154.1 mouse_genomes_project 5 117531616 117547483 + MGP_WSBEiJ_P0072517 Rab35 protein_coding protein_coding MGP_WSBEiJ_T0072518.1 MGP_WSBEiJ_G0029154.1 mouse_genomes_project 5 117531852 117545866 + MGP_WSBEiJ_P0072518 Rab35 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001402.1 MGP_WSBEiJ_G0001330.1 mouse_genomes_project 5 5468605 5470990 - TEC TEC MGP_WSBEiJ_T0071347.1 MGP_WSBEiJ_G0028911.1 mouse_genomes_project 5 90836974 90865004 + MGP_WSBEiJ_P0071347 Afm protein_coding protein_coding MGP_WSBEiJ_T0071348.1 MGP_WSBEiJ_G0028911.1 mouse_genomes_project 5 90836991 90860043 + MGP_WSBEiJ_P0071348 Afm protein_coding protein_coding MGP_WSBEiJ_T0001611.1 MGP_WSBEiJ_G0001534.1 mouse_genomes_project 5 65616709 65618919 - TEC TEC MGP_WSBEiJ_T0099629.1 MGP_WSBEiJ_G0038292.1 mouse_genomes_project 5 155344058 155344177 - Gm26013 snoRNA snoRNA MGP_WSBEiJ_T0001732.1 MGP_WSBEiJ_G0001654.1 mouse_genomes_project 5 116790978 116791537 + TEC TEC MGP_WSBEiJ_T0001632.1 MGP_WSBEiJ_G0001555.1 mouse_genomes_project 5 68469126 68474083 - TEC TEC MGP_WSBEiJ_T0001461.1 MGP_WSBEiJ_G0001386.1 mouse_genomes_project 5 30462741 30467518 - TEC TEC MGP_WSBEiJ_T0008192.1 MGP_WSBEiJ_G0006665.1 mouse_genomes_project 5 118259163 118265256 + B230112J18Rik lincRNA lincRNA MGP_WSBEiJ_T0004595.1 MGP_WSBEiJ_G0003980.1 mouse_genomes_project 5 36845512 36858958 + Clnkos antisense antisense MGP_WSBEiJ_T0004596.1 MGP_WSBEiJ_G0003980.1 mouse_genomes_project 5 36845513 36858958 + Clnkos antisense antisense MGP_WSBEiJ_T0001424.1 MGP_WSBEiJ_G0001352.1 mouse_genomes_project 5 12929706 12930887 + TEC TEC MGP_WSBEiJ_T0017541.1 MGP_WSBEiJ_G0015014.1 mouse_genomes_project 5 29390704 29501937 + Gm43809 processed_transcript processed_transcript MGP_WSBEiJ_T0017542.1 MGP_WSBEiJ_G0015014.1 mouse_genomes_project 5 29408373 29501917 + Gm43809 processed_transcript processed_transcript MGP_WSBEiJ_T0073682.1 MGP_WSBEiJ_G0029352.1 mouse_genomes_project 5 138520713 138536664 + MGP_WSBEiJ_P0073682 Tbl2 protein_coding protein_coding MGP_WSBEiJ_T0073683.1 MGP_WSBEiJ_G0029352.1 mouse_genomes_project 5 138520742 138530726 + MGP_WSBEiJ_P0073683 Tbl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073684.1 MGP_WSBEiJ_G0029352.1 mouse_genomes_project 5 138520742 138528693 + MGP_WSBEiJ_P0073684 Tbl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073685.1 MGP_WSBEiJ_G0029352.1 mouse_genomes_project 5 138520747 138525483 + MGP_WSBEiJ_P0073685 Tbl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073686.1 MGP_WSBEiJ_G0029352.1 mouse_genomes_project 5 138523790 138528731 + MGP_WSBEiJ_P0073686 Tbl2 protein_coding protein_coding MGP_WSBEiJ_T0004750.1 MGP_WSBEiJ_G0004090.1 mouse_genomes_project 5 126022031 126026340 - Gm15747 antisense antisense MGP_WSBEiJ_T0004751.1 MGP_WSBEiJ_G0004090.1 mouse_genomes_project 5 126022042 126023447 - Gm15747 antisense antisense MGP_WSBEiJ_T0008095.1 MGP_WSBEiJ_G0006605.1 mouse_genomes_project 5 100905323 100909437 + Gm9932 lincRNA lincRNA MGP_WSBEiJ_T0072562.1 MGP_WSBEiJ_G0029160.1 mouse_genomes_project 5 118369605 118391333 - MGP_WSBEiJ_P0072562 Hspb8 protein_coding protein_coding MGP_WSBEiJ_T0072563.1 MGP_WSBEiJ_G0029160.1 mouse_genomes_project 5 118370054 118381182 - Hspb8 protein_coding processed_transcript MGP_WSBEiJ_T0071791.1 MGP_WSBEiJ_G0029015.1 mouse_genomes_project 5 107668092 107668196 + MGP_WSBEiJ_P0071791 Gm17304 protein_coding protein_coding MGP_WSBEiJ_T0001603.1 MGP_WSBEiJ_G0001526.1 mouse_genomes_project 5 65053173 65057512 + TEC TEC MGP_WSBEiJ_T0008078.1 MGP_WSBEiJ_G0006592.1 mouse_genomes_project 5 97479341 97494139 + Gm8013 lincRNA lincRNA MGP_WSBEiJ_T0010493.1 MGP_WSBEiJ_G0008650.1 mouse_genomes_project 5 6351277 6351353 + Mir879 miRNA miRNA MGP_WSBEiJ_T0073979.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120441 141131340 + MGP_WSBEiJ_P0073979 Actl6b protein_coding protein_coding MGP_WSBEiJ_T0073980.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120444 141140405 + MGP_WSBEiJ_P0073980 Actl6b protein_coding protein_coding MGP_WSBEiJ_T0073981.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120457 141138706 + MGP_WSBEiJ_P0073981 Actl6b protein_coding protein_coding MGP_WSBEiJ_T0073982.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120462 141121271 + Actl6b protein_coding retained_intron MGP_WSBEiJ_T0073983.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120462 141137636 + MGP_WSBEiJ_P0073983 Actl6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073984.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120463 141136786 + MGP_WSBEiJ_P0073984 Actl6b protein_coding protein_coding MGP_WSBEiJ_T0073985.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120479 141121957 + MGP_WSBEiJ_P0073985 Actl6b protein_coding protein_coding MGP_WSBEiJ_T0073986.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120481 141123580 + Actl6b protein_coding retained_intron MGP_WSBEiJ_T0073987.1 MGP_WSBEiJ_G0029408.1 mouse_genomes_project 5 141120481 141140380 + MGP_WSBEiJ_P0073987 Actl6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070708.1 MGP_WSBEiJ_G0028776.1 mouse_genomes_project 5 65434726 65473675 + MGP_WSBEiJ_P0070708 Nsun7 protein_coding protein_coding MGP_WSBEiJ_T0070709.1 MGP_WSBEiJ_G0028776.1 mouse_genomes_project 5 65434741 65474639 + MGP_WSBEiJ_P0070709 Nsun7 protein_coding protein_coding MGP_WSBEiJ_T0070710.1 MGP_WSBEiJ_G0028776.1 mouse_genomes_project 5 65434847 65440674 + Nsun7 protein_coding retained_intron MGP_WSBEiJ_T0070711.1 MGP_WSBEiJ_G0028776.1 mouse_genomes_project 5 65435141 65474628 + MGP_WSBEiJ_P0070711 Nsun7 protein_coding protein_coding MGP_WSBEiJ_T0008062.1 MGP_WSBEiJ_G0006576.1 mouse_genomes_project 5 85684996 85686974 + Gm43567 lincRNA lincRNA MGP_WSBEiJ_T0098322.1 MGP_WSBEiJ_G0036985.1 mouse_genomes_project 5 6143915 6144082 + Gm24666 snRNA snRNA MGP_WSBEiJ_T0099612.1 MGP_WSBEiJ_G0038275.1 mouse_genomes_project 5 100564960 100565036 + Gm26252 snoRNA snoRNA MGP_WSBEiJ_T0017589.1 MGP_WSBEiJ_G0015031.1 mouse_genomes_project 5 125592696 125618509 - Gm44574 processed_transcript processed_transcript MGP_WSBEiJ_T0004756.1 MGP_WSBEiJ_G0004093.1 mouse_genomes_project 5 126948241 126948936 + Gm42425 antisense antisense MGP_WSBEiJ_T0073724.1 MGP_WSBEiJ_G0029362.1 mouse_genomes_project 5 138966734 138969847 - MGP_WSBEiJ_P0073724 Ccl24 protein_coding protein_coding MGP_WSBEiJ_T0073725.1 MGP_WSBEiJ_G0029362.1 mouse_genomes_project 5 138967377 138969847 - MGP_WSBEiJ_P0073725 Ccl24 protein_coding protein_coding MGP_WSBEiJ_T0071606.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101097336 101114602 - Sec31a protein_coding retained_intron MGP_WSBEiJ_T0071607.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101097336 101153550 - MGP_WSBEiJ_P0071607 Sec31a protein_coding protein_coding MGP_WSBEiJ_T0071608.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101097337 101109173 - MGP_WSBEiJ_P0071608 Sec31a protein_coding protein_coding MGP_WSBEiJ_T0071609.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101097341 101153491 - MGP_WSBEiJ_P0071609 Sec31a protein_coding protein_coding MGP_WSBEiJ_T0071610.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101097695 101132255 - MGP_WSBEiJ_P0071610 Sec31a protein_coding protein_coding MGP_WSBEiJ_T0071611.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101097833 101099958 - Sec31a protein_coding retained_intron MGP_WSBEiJ_T0071612.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101097898 101118534 - MGP_WSBEiJ_P0071612 Sec31a protein_coding protein_coding MGP_WSBEiJ_T0071613.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101101441 101114688 - MGP_WSBEiJ_P0071613 Sec31a protein_coding protein_coding MGP_WSBEiJ_T0071614.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101118565 101128967 - MGP_WSBEiJ_P0071614 Sec31a protein_coding protein_coding MGP_WSBEiJ_T0071615.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101137796 101141925 - Sec31a protein_coding processed_transcript MGP_WSBEiJ_T0071616.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101144030 101145961 - Sec31a protein_coding retained_intron MGP_WSBEiJ_T0071617.1 MGP_WSBEiJ_G0028973.1 mouse_genomes_project 5 101152726 101153482 - Sec31a protein_coding retained_intron MGP_WSBEiJ_T0010507.1 MGP_WSBEiJ_G0008664.1 mouse_genomes_project 5 40073812 40073894 + Mir6414 miRNA miRNA MGP_WSBEiJ_T0008205.1 MGP_WSBEiJ_G0006676.1 mouse_genomes_project 5 121347557 121353055 - Gm7538 lincRNA lincRNA MGP_WSBEiJ_T0073278.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127742343 127918298 - MGP_WSBEiJ_P0073278 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073279.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127742343 127918298 - MGP_WSBEiJ_P0073279 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073280.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127742343 127770303 - MGP_WSBEiJ_P0073280 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073281.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127742345 127918298 - MGP_WSBEiJ_P0073281 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073282.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127742352 127915752 - MGP_WSBEiJ_P0073282 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073283.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127743025 127918298 - MGP_WSBEiJ_P0073283 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073284.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127743025 127853367 - MGP_WSBEiJ_P0073284 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073285.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127743082 127753011 - MGP_WSBEiJ_P0073285 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073286.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127743324 127752550 - MGP_WSBEiJ_P0073286 Ncor2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073287.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127743422 127750709 - Ncor2 protein_coding retained_intron MGP_WSBEiJ_T0073288.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127752584 127754413 - MGP_WSBEiJ_P0073288 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073289.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127752590 127753576 - Ncor2 protein_coding retained_intron MGP_WSBEiJ_T0073290.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127758290 127787021 - MGP_WSBEiJ_P0073290 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073291.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127776414 127784610 - Ncor2 protein_coding retained_intron MGP_WSBEiJ_T0073292.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127779564 127787032 - MGP_WSBEiJ_P0073292 Ncor2 protein_coding protein_coding MGP_WSBEiJ_T0073293.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127790917 127854521 - MGP_WSBEiJ_P0073293 Ncor2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0073294.1 MGP_WSBEiJ_G0029284.1 mouse_genomes_project 5 127791326 127853945 - MGP_WSBEiJ_P0073294 Ncor2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0004812.1 MGP_WSBEiJ_G0004133.1 mouse_genomes_project 5 153814850 153820830 - Gm19719 antisense antisense MGP_WSBEiJ_T0008012.1 MGP_WSBEiJ_G0006538.1 mouse_genomes_project 5 59841832 59846543 - 1700014F14Rik lincRNA lincRNA MGP_WSBEiJ_T0073314.1 MGP_WSBEiJ_G0029290.1 mouse_genomes_project 5 128248516 128292787 + MGP_WSBEiJ_P0073314 Aacs protein_coding protein_coding MGP_WSBEiJ_T0073315.1 MGP_WSBEiJ_G0029290.1 mouse_genomes_project 5 128278766 128288114 + Aacs protein_coding retained_intron MGP_WSBEiJ_T0073316.1 MGP_WSBEiJ_G0029290.1 mouse_genomes_project 5 128284877 128287273 + Aacs protein_coding retained_intron MGP_WSBEiJ_T0073317.1 MGP_WSBEiJ_G0029290.1 mouse_genomes_project 5 128288075 128288578 + Aacs protein_coding processed_transcript MGP_WSBEiJ_T0073318.1 MGP_WSBEiJ_G0029290.1 mouse_genomes_project 5 128289573 128290371 + Aacs protein_coding processed_transcript MGP_WSBEiJ_T0073319.1 MGP_WSBEiJ_G0029290.1 mouse_genomes_project 5 128290619 128291732 + Aacs protein_coding processed_transcript MGP_WSBEiJ_T0007940.1 MGP_WSBEiJ_G0006488.1 mouse_genomes_project 5 23271476 23272944 + Gm43972 lincRNA lincRNA MGP_WSBEiJ_T0010517.1 MGP_WSBEiJ_G0008674.1 mouse_genomes_project 5 68606375 68606481 + Gm24368 miRNA miRNA MGP_WSBEiJ_T0073057.1 MGP_WSBEiJ_G0029250.1 mouse_genomes_project 5 126171193 126172616 + MGP_WSBEiJ_P0073057 B3gnt4 protein_coding protein_coding MGP_WSBEiJ_T0097413.1 MGP_WSBEiJ_G0036087.1 mouse_genomes_project 5 46317748 46319888 + Gm20475 sense_intronic sense_intronic MGP_WSBEiJ_T0073627.1 MGP_WSBEiJ_G0029341.1 mouse_genomes_project 5 138250828 138255966 - MGP_WSBEiJ_P0073627 Wbscr28 protein_coding protein_coding MGP_WSBEiJ_T0073628.1 MGP_WSBEiJ_G0029341.1 mouse_genomes_project 5 138250829 138255966 - MGP_WSBEiJ_P0073628 Wbscr28 protein_coding protein_coding MGP_WSBEiJ_T0071415.1 MGP_WSBEiJ_G0028932.1 mouse_genomes_project 5 92596891 92602405 - MGP_WSBEiJ_P0071415 U90926 protein_coding protein_coding MGP_WSBEiJ_T0071416.1 MGP_WSBEiJ_G0028932.1 mouse_genomes_project 5 92596894 92602405 - MGP_WSBEiJ_P0071416 U90926 protein_coding protein_coding MGP_WSBEiJ_T0071417.1 MGP_WSBEiJ_G0028932.1 mouse_genomes_project 5 92597112 92599350 - U90926 protein_coding retained_intron MGP_WSBEiJ_T0010528.1 MGP_WSBEiJ_G0008685.1 mouse_genomes_project 5 101241943 101242019 - Gm23222 miRNA miRNA MGP_WSBEiJ_T0069712.1 MGP_WSBEiJ_G0028614.1 mouse_genomes_project 5 29230056 29251706 + MGP_WSBEiJ_P0069712 Zfp512 protein_coding protein_coding MGP_WSBEiJ_T0069713.1 MGP_WSBEiJ_G0028614.1 mouse_genomes_project 5 29230060 29266803 + MGP_WSBEiJ_P0069713 Zfp512 protein_coding protein_coding MGP_WSBEiJ_T0069714.1 MGP_WSBEiJ_G0028614.1 mouse_genomes_project 5 29230075 29258505 + MGP_WSBEiJ_P0069714 Zfp512 protein_coding protein_coding MGP_WSBEiJ_T0069715.1 MGP_WSBEiJ_G0028614.1 mouse_genomes_project 5 29230105 29239552 + Zfp512 protein_coding retained_intron MGP_WSBEiJ_T0069716.1 MGP_WSBEiJ_G0028614.1 mouse_genomes_project 5 29230141 29266798 + MGP_WSBEiJ_P0069716 Zfp512 protein_coding protein_coding MGP_WSBEiJ_T0069717.1 MGP_WSBEiJ_G0028614.1 mouse_genomes_project 5 29230143 29231046 + Zfp512 protein_coding retained_intron MGP_WSBEiJ_T0069718.1 MGP_WSBEiJ_G0028614.1 mouse_genomes_project 5 29230776 29251603 + Zfp512 protein_coding retained_intron MGP_WSBEiJ_T0069719.1 MGP_WSBEiJ_G0028614.1 mouse_genomes_project 5 29250654 29257892 + MGP_WSBEiJ_P0069719 Zfp512 protein_coding protein_coding MGP_WSBEiJ_T0071995.1 MGP_WSBEiJ_G0029054.1 mouse_genomes_project 5 110880903 110881157 - MGP_WSBEiJ_P0071995 protein_coding protein_coding MGP_WSBEiJ_T0073823.1 MGP_WSBEiJ_G0029379.1 mouse_genomes_project 5 139595090 139599457 + MGP_WSBEiJ_P0073823 Alkbh4 protein_coding protein_coding MGP_WSBEiJ_T0073824.1 MGP_WSBEiJ_G0029379.1 mouse_genomes_project 5 139595098 139600557 + MGP_WSBEiJ_P0073824 Alkbh4 protein_coding protein_coding MGP_WSBEiJ_T0073825.1 MGP_WSBEiJ_G0029379.1 mouse_genomes_project 5 139595102 139599723 + MGP_WSBEiJ_P0073825 Alkbh4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073826.1 MGP_WSBEiJ_G0029379.1 mouse_genomes_project 5 139595146 139599448 + MGP_WSBEiJ_P0073826 Alkbh4 protein_coding protein_coding MGP_WSBEiJ_T0073827.1 MGP_WSBEiJ_G0029379.1 mouse_genomes_project 5 139597725 139600560 + MGP_WSBEiJ_P0073827 Alkbh4 protein_coding protein_coding MGP_WSBEiJ_T0070950.1 MGP_WSBEiJ_G0028819.1 mouse_genomes_project 5 73609849 73614046 + MGP_WSBEiJ_P0070950 Rasl11b protein_coding protein_coding MGP_WSBEiJ_T0070951.1 MGP_WSBEiJ_G0028819.1 mouse_genomes_project 5 73610008 73610854 + Rasl11b protein_coding retained_intron MGP_WSBEiJ_T0070952.1 MGP_WSBEiJ_G0028819.1 mouse_genomes_project 5 73612455 73614037 + Rasl11b protein_coding retained_intron MGP_WSBEiJ_T0096829.1 MGP_WSBEiJ_G0035510.1 mouse_genomes_project 5 43224387 43224769 - pseudogene pseudogene MGP_WSBEiJ_T0071313.1 MGP_WSBEiJ_G0028904.1 mouse_genomes_project 5 89773770 89826432 + MGP_WSBEiJ_P0071313 Npffr2 protein_coding protein_coding MGP_WSBEiJ_T0008184.1 MGP_WSBEiJ_G0006659.1 mouse_genomes_project 5 117225294 117226717 - 4930401G09Rik lincRNA lincRNA MGP_WSBEiJ_T0073024.1 MGP_WSBEiJ_G0029244.1 mouse_genomes_project 5 125788832 125800576 - MGP_WSBEiJ_P0073024 Hpd protein_coding protein_coding MGP_WSBEiJ_T0073025.1 MGP_WSBEiJ_G0029244.1 mouse_genomes_project 5 125788897 125789948 - Hpd protein_coding processed_transcript MGP_WSBEiJ_T0073026.1 MGP_WSBEiJ_G0029244.1 mouse_genomes_project 5 125789126 125792950 - MGP_WSBEiJ_P0073026 Hpd protein_coding protein_coding MGP_WSBEiJ_T0073027.1 MGP_WSBEiJ_G0029244.1 mouse_genomes_project 5 125794563 125800571 - Hpd protein_coding retained_intron MGP_WSBEiJ_T0073028.1 MGP_WSBEiJ_G0029244.1 mouse_genomes_project 5 125794563 125800572 - MGP_WSBEiJ_P0073028 Hpd protein_coding protein_coding MGP_WSBEiJ_T0073029.1 MGP_WSBEiJ_G0029244.1 mouse_genomes_project 5 125798507 125799916 - Hpd protein_coding processed_transcript MGP_WSBEiJ_T0100879.1 MGP_WSBEiJ_G0039337.1 mouse_genomes_project 5 156180324 156196005 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014435.1 MGP_WSBEiJ_G0012565.1 mouse_genomes_project 5 13499531 13500315 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014437.1 MGP_WSBEiJ_G0012567.1 mouse_genomes_project 5 14151709 14151962 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073917.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140827757 140830306 + MGP_WSBEiJ_P0073917 Ache protein_coding protein_coding MGP_WSBEiJ_T0073918.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140828004 140830306 + MGP_WSBEiJ_P0073918 Ache protein_coding protein_coding MGP_WSBEiJ_T0073919.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140828004 140830306 + MGP_WSBEiJ_P0073919 Ache protein_coding protein_coding MGP_WSBEiJ_T0073920.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140828515 140834623 + MGP_WSBEiJ_P0073920 Ache protein_coding protein_coding MGP_WSBEiJ_T0073921.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140828521 140834618 + MGP_WSBEiJ_P0073921 Ache protein_coding protein_coding MGP_WSBEiJ_T0073922.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140828522 140834617 + MGP_WSBEiJ_P0073922 Ache protein_coding protein_coding MGP_WSBEiJ_T0073923.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140828523 140832500 + Ache protein_coding retained_intron MGP_WSBEiJ_T0073924.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140829239 140830306 + MGP_WSBEiJ_P0073924 Ache protein_coding protein_coding MGP_WSBEiJ_T0073925.1 MGP_WSBEiJ_G0029397.1 mouse_genomes_project 5 140829398 140830306 + MGP_WSBEiJ_P0073925 Ache protein_coding protein_coding MGP_WSBEiJ_T0008068.1 MGP_WSBEiJ_G0006582.1 mouse_genomes_project 5 91235710 91237881 + lincRNA lincRNA MGP_WSBEiJ_T0001454.1 MGP_WSBEiJ_G0001380.1 mouse_genomes_project 5 29374852 29375483 + TEC TEC MGP_WSBEiJ_T0070928.1 MGP_WSBEiJ_G0028814.1 mouse_genomes_project 5 72865383 72949934 + MGP_WSBEiJ_P0070928 Dcun1d4 protein_coding protein_coding MGP_WSBEiJ_T0070929.1 MGP_WSBEiJ_G0028814.1 mouse_genomes_project 5 72869658 72946425 + Dcun1d4 protein_coding processed_transcript MGP_WSBEiJ_T0070930.1 MGP_WSBEiJ_G0028814.1 mouse_genomes_project 5 72876233 72949934 + MGP_WSBEiJ_P0070930 Dcun1d4 protein_coding protein_coding MGP_WSBEiJ_T0070931.1 MGP_WSBEiJ_G0028814.1 mouse_genomes_project 5 72876275 72933128 + MGP_WSBEiJ_P0070931 Dcun1d4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070932.1 MGP_WSBEiJ_G0028814.1 mouse_genomes_project 5 72876331 72919510 + MGP_WSBEiJ_P0070932 Dcun1d4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070933.1 MGP_WSBEiJ_G0028814.1 mouse_genomes_project 5 72876375 72949927 + MGP_WSBEiJ_P0070933 Dcun1d4 protein_coding protein_coding MGP_WSBEiJ_T0070934.1 MGP_WSBEiJ_G0028814.1 mouse_genomes_project 5 72878262 72906923 + Dcun1d4 protein_coding processed_transcript MGP_WSBEiJ_T0070935.1 MGP_WSBEiJ_G0028814.1 mouse_genomes_project 5 72897870 72923769 + MGP_WSBEiJ_P0070935 Dcun1d4 protein_coding protein_coding MGP_WSBEiJ_T0008345.1 MGP_WSBEiJ_G0006772.1 mouse_genomes_project 5 155226025 155228504 - Gm43598 lincRNA lincRNA MGP_WSBEiJ_T0010489.1 MGP_WSBEiJ_G0008646.1 mouse_genomes_project 5 501114 501231 + Gm26238 miRNA miRNA MGP_WSBEiJ_T0001536.1 MGP_WSBEiJ_G0001460.1 mouse_genomes_project 5 47474745 47478922 - TEC TEC MGP_WSBEiJ_T0014773.1 MGP_WSBEiJ_G0012903.1 mouse_genomes_project 5 155949723 155950247 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001615.1 MGP_WSBEiJ_G0001538.1 mouse_genomes_project 5 65783758 65786579 - TEC TEC MGP_WSBEiJ_T0099607.1 MGP_WSBEiJ_G0038270.1 mouse_genomes_project 5 90077667 90077796 + Gm25758 snoRNA snoRNA MGP_WSBEiJ_T0073527.1 MGP_WSBEiJ_G0029331.1 mouse_genomes_project 5 137476500 137487617 - MGP_WSBEiJ_P0073527 Ncf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073528.1 MGP_WSBEiJ_G0029331.1 mouse_genomes_project 5 137476707 137487617 - MGP_WSBEiJ_P0073528 Ncf1 protein_coding protein_coding MGP_WSBEiJ_T0073529.1 MGP_WSBEiJ_G0029331.1 mouse_genomes_project 5 137476707 137487617 - MGP_WSBEiJ_P0073529 Ncf1 protein_coding protein_coding MGP_WSBEiJ_T0073530.1 MGP_WSBEiJ_G0029331.1 mouse_genomes_project 5 137476707 137487617 - MGP_WSBEiJ_P0073530 Ncf1 protein_coding protein_coding MGP_WSBEiJ_T0073531.1 MGP_WSBEiJ_G0029331.1 mouse_genomes_project 5 137477819 137478670 - Ncf1 protein_coding retained_intron MGP_WSBEiJ_T0073532.1 MGP_WSBEiJ_G0029331.1 mouse_genomes_project 5 137480000 137486535 - Ncf1 protein_coding retained_intron MGP_WSBEiJ_T0073533.1 MGP_WSBEiJ_G0029331.1 mouse_genomes_project 5 137483866 137485962 - Ncf1 protein_coding retained_intron MGP_WSBEiJ_T0073876.1 MGP_WSBEiJ_G0029387.1 mouse_genomes_project 5 140484619 140500441 + MGP_WSBEiJ_P0073876 Fis1 protein_coding protein_coding MGP_WSBEiJ_T0073877.1 MGP_WSBEiJ_G0029387.1 mouse_genomes_project 5 140484750 140500358 + MGP_WSBEiJ_P0073877 Fis1 protein_coding protein_coding MGP_WSBEiJ_T0073878.1 MGP_WSBEiJ_G0029387.1 mouse_genomes_project 5 140496303 140500443 + MGP_WSBEiJ_P0073878 Fis1 protein_coding protein_coding MGP_WSBEiJ_T0073879.1 MGP_WSBEiJ_G0029387.1 mouse_genomes_project 5 140496659 140500166 + Fis1 protein_coding processed_transcript MGP_WSBEiJ_T0073880.1 MGP_WSBEiJ_G0029387.1 mouse_genomes_project 5 140496670 140500319 + Fis1 protein_coding processed_transcript MGP_WSBEiJ_T0073881.1 MGP_WSBEiJ_G0029387.1 mouse_genomes_project 5 140497071 140500220 + Fis1 protein_coding processed_transcript MGP_WSBEiJ_T0071867.1 MGP_WSBEiJ_G0029029.1 mouse_genomes_project 5 108818523 108828400 - MGP_WSBEiJ_P0071867 Gfi1 protein_coding protein_coding MGP_WSBEiJ_T0071868.1 MGP_WSBEiJ_G0029029.1 mouse_genomes_project 5 108818523 108826938 - MGP_WSBEiJ_P0071868 Gfi1 protein_coding protein_coding MGP_WSBEiJ_T0071869.1 MGP_WSBEiJ_G0029029.1 mouse_genomes_project 5 108818532 108828400 - MGP_WSBEiJ_P0071869 Gfi1 protein_coding protein_coding MGP_WSBEiJ_T0071870.1 MGP_WSBEiJ_G0029029.1 mouse_genomes_project 5 108819090 108826556 - MGP_WSBEiJ_P0071870 Gfi1 protein_coding protein_coding MGP_WSBEiJ_T0071871.1 MGP_WSBEiJ_G0029029.1 mouse_genomes_project 5 108823456 108828631 - MGP_WSBEiJ_P0071871 Gfi1 protein_coding protein_coding MGP_WSBEiJ_T0011397.1 MGP_WSBEiJ_G0009554.1 mouse_genomes_project 5 89924464 89924788 + Gm25320 misc_RNA misc_RNA MGP_WSBEiJ_T0001602.1 MGP_WSBEiJ_G0001525.1 mouse_genomes_project 5 64998866 64999574 + TEC TEC MGP_WSBEiJ_T0074787.1 MGP_WSBEiJ_G0029577.1 mouse_genomes_project 5 153944430 153956742 + Medag protein_coding retained_intron MGP_WSBEiJ_T0074788.1 MGP_WSBEiJ_G0029577.1 mouse_genomes_project 5 153944636 153963664 + MGP_WSBEiJ_P0074788 Medag protein_coding protein_coding MGP_WSBEiJ_T0014690.1 MGP_WSBEiJ_G0012820.1 mouse_genomes_project 5 117121972 117122274 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017528.1 MGP_WSBEiJ_G0015010.1 mouse_genomes_project 5 2048655 2051317 - Gm43623 processed_transcript processed_transcript MGP_WSBEiJ_T0004724.1 MGP_WSBEiJ_G0004073.1 mouse_genomes_project 5 121741475 121746362 - Tbx3os1 antisense antisense MGP_WSBEiJ_T0004725.1 MGP_WSBEiJ_G0004073.1 mouse_genomes_project 5 121741478 121805239 - Tbx3os1 antisense antisense MGP_WSBEiJ_T0004726.1 MGP_WSBEiJ_G0004073.1 mouse_genomes_project 5 121741570 121742096 - Tbx3os1 antisense antisense MGP_WSBEiJ_T0004727.1 MGP_WSBEiJ_G0004073.1 mouse_genomes_project 5 121786745 121805316 - Tbx3os1 antisense antisense MGP_WSBEiJ_T0004728.1 MGP_WSBEiJ_G0004073.1 mouse_genomes_project 5 121787383 121805527 - Tbx3os1 antisense antisense MGP_WSBEiJ_T0004729.1 MGP_WSBEiJ_G0004073.1 mouse_genomes_project 5 121794618 121855243 - Tbx3os1 antisense antisense MGP_WSBEiJ_T0074442.1 MGP_WSBEiJ_G0029502.1 mouse_genomes_project 5 147327790 147332394 - MGP_WSBEiJ_P0074442 Zfp853 protein_coding protein_coding MGP_WSBEiJ_T0072192.1 MGP_WSBEiJ_G0029092.1 mouse_genomes_project 5 114510368 114621160 - MGP_WSBEiJ_P0072192 Adrbk2 protein_coding protein_coding MGP_WSBEiJ_T0072193.1 MGP_WSBEiJ_G0029092.1 mouse_genomes_project 5 114512485 114621160 - MGP_WSBEiJ_P0072193 Adrbk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072194.1 MGP_WSBEiJ_G0029092.1 mouse_genomes_project 5 114515993 114524257 - Adrbk2 protein_coding retained_intron MGP_WSBEiJ_T0072195.1 MGP_WSBEiJ_G0029092.1 mouse_genomes_project 5 114517628 114621437 - MGP_WSBEiJ_P0072195 Adrbk2 protein_coding protein_coding MGP_WSBEiJ_T0072196.1 MGP_WSBEiJ_G0029092.1 mouse_genomes_project 5 114519945 114525677 - Adrbk2 protein_coding retained_intron MGP_WSBEiJ_T0072197.1 MGP_WSBEiJ_G0029092.1 mouse_genomes_project 5 114562097 114621149 - MGP_WSBEiJ_P0072197 Adrbk2 protein_coding protein_coding MGP_WSBEiJ_T0008077.1 MGP_WSBEiJ_G0006591.1 mouse_genomes_project 5 97466486 97480245 - Gm33370 lincRNA lincRNA MGP_WSBEiJ_T0014630.1 MGP_WSBEiJ_G0012760.1 mouse_genomes_project 5 92147098 92147962 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071027.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76071614 76113192 + MGP_WSBEiJ_P0071027 Exoc1 protein_coding protein_coding MGP_WSBEiJ_T0071028.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76071626 76113183 + MGP_WSBEiJ_P0071028 Exoc1 protein_coding protein_coding MGP_WSBEiJ_T0071029.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76071631 76082018 + Exoc1 protein_coding retained_intron MGP_WSBEiJ_T0071030.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76071647 76104730 + Exoc1 protein_coding processed_transcript MGP_WSBEiJ_T0071031.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76071661 76083391 + Exoc1 protein_coding retained_intron MGP_WSBEiJ_T0071032.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76071661 76113185 + MGP_WSBEiJ_P0071032 Exoc1 protein_coding protein_coding MGP_WSBEiJ_T0071033.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76084226 76091798 + Exoc1 protein_coding retained_intron MGP_WSBEiJ_T0071034.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76094926 76098562 + Exoc1 protein_coding retained_intron MGP_WSBEiJ_T0071035.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76103296 76110101 + Exoc1 protein_coding retained_intron MGP_WSBEiJ_T0071036.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76104163 76110914 + Exoc1 protein_coding retained_intron MGP_WSBEiJ_T0071037.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76104301 76109862 + MGP_WSBEiJ_P0071037 Exoc1 protein_coding protein_coding MGP_WSBEiJ_T0071038.1 MGP_WSBEiJ_G0028833.1 mouse_genomes_project 5 76110779 76112887 + Exoc1 protein_coding retained_intron MGP_WSBEiJ_T0068811.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 654529 695598 + Krit1 protein_coding retained_intron MGP_WSBEiJ_T0068812.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 654529 695673 + MGP_WSBEiJ_P0068812 Krit1 protein_coding protein_coding MGP_WSBEiJ_T0068813.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 654530 663712 + Krit1 protein_coding retained_intron MGP_WSBEiJ_T0068814.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 654534 695673 + MGP_WSBEiJ_P0068814 Krit1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068815.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 654535 699900 + MGP_WSBEiJ_P0068815 Krit1 protein_coding protein_coding MGP_WSBEiJ_T0068816.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 654750 698640 + MGP_WSBEiJ_P0068816 Krit1 protein_coding protein_coding MGP_WSBEiJ_T0068817.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 655585 661080 + MGP_WSBEiJ_P0068817 Krit1 protein_coding protein_coding MGP_WSBEiJ_T0068818.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 656638 662899 + Krit1 protein_coding retained_intron MGP_WSBEiJ_T0068819.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 664774 670564 + Krit1 protein_coding retained_intron MGP_WSBEiJ_T0068820.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 667686 671938 + Krit1 protein_coding retained_intron MGP_WSBEiJ_T0068821.1 MGP_WSBEiJ_G0028457.1 mouse_genomes_project 5 675149 677070 + Krit1 protein_coding retained_intron MGP_WSBEiJ_T0073307.1 MGP_WSBEiJ_G0029287.1 mouse_genomes_project 5 128151792 128153025 + MGP_WSBEiJ_P0073307 Gm10382 protein_coding protein_coding MGP_WSBEiJ_T0073672.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138456467 138491780 + Mlxipl protein_coding processed_transcript MGP_WSBEiJ_T0073673.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138474631 138493042 + Mlxipl protein_coding retained_intron MGP_WSBEiJ_T0073674.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138474642 138493668 + MGP_WSBEiJ_P0073674 Mlxipl protein_coding protein_coding MGP_WSBEiJ_T0073675.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138474644 138507875 + MGP_WSBEiJ_P0073675 Mlxipl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073676.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138474653 138507875 + MGP_WSBEiJ_P0073676 Mlxipl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073677.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138474653 138507875 + MGP_WSBEiJ_P0073677 Mlxipl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073678.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138474653 138507875 + MGP_WSBEiJ_P0073678 Mlxipl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073679.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138474658 138508335 + MGP_WSBEiJ_P0073679 Mlxipl protein_coding protein_coding MGP_WSBEiJ_T0073680.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138503563 138504564 + MGP_WSBEiJ_P0073680 Mlxipl protein_coding protein_coding MGP_WSBEiJ_T0073681.1 MGP_WSBEiJ_G0029351.1 mouse_genomes_project 5 138503584 138505692 + MGP_WSBEiJ_P0073681 Mlxipl protein_coding protein_coding MGP_WSBEiJ_T0014669.1 MGP_WSBEiJ_G0012799.1 mouse_genomes_project 5 110080152 110252141 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097423.1 MGP_WSBEiJ_G0036097.1 mouse_genomes_project 5 131683091 131684113 - Gm42871 sense_intronic sense_intronic MGP_WSBEiJ_T0070940.1 MGP_WSBEiJ_G0028817.1 mouse_genomes_project 5 73041880 73070941 + MGP_WSBEiJ_P0070940 Spata18 protein_coding protein_coding MGP_WSBEiJ_T0070941.1 MGP_WSBEiJ_G0028817.1 mouse_genomes_project 5 73041883 73066850 + MGP_WSBEiJ_P0070941 Spata18 protein_coding non_stop_decay MGP_WSBEiJ_T0070942.1 MGP_WSBEiJ_G0028817.1 mouse_genomes_project 5 73047985 73070911 + MGP_WSBEiJ_P0070942 Spata18 protein_coding protein_coding MGP_WSBEiJ_T0070943.1 MGP_WSBEiJ_G0028817.1 mouse_genomes_project 5 73049717 73070913 + MGP_WSBEiJ_P0070943 Spata18 protein_coding protein_coding MGP_WSBEiJ_T0071781.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106898722 106939341 + MGP_WSBEiJ_P0071781 Zfp326 protein_coding protein_coding MGP_WSBEiJ_T0071782.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106898725 106940379 + Zfp326 protein_coding retained_intron MGP_WSBEiJ_T0071783.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106898725 106911353 + Zfp326 protein_coding retained_intron MGP_WSBEiJ_T0071784.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106898725 106940379 + MGP_WSBEiJ_P0071784 Zfp326 protein_coding protein_coding MGP_WSBEiJ_T0071785.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106898733 106939738 + MGP_WSBEiJ_P0071785 Zfp326 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071786.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106899098 106909516 + Zfp326 protein_coding processed_transcript MGP_WSBEiJ_T0071787.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106900927 106932136 + Zfp326 protein_coding retained_intron MGP_WSBEiJ_T0071788.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106914272 106921069 + Zfp326 protein_coding retained_intron MGP_WSBEiJ_T0071789.1 MGP_WSBEiJ_G0029013.1 mouse_genomes_project 5 106929475 106932549 + Zfp326 protein_coding retained_intron MGP_WSBEiJ_T0001597.1 MGP_WSBEiJ_G0001520.1 mouse_genomes_project 5 64781327 64782879 - TEC TEC MGP_WSBEiJ_T0071747.1 MGP_WSBEiJ_G0029000.1 mouse_genomes_project 5 105189454 105203057 + MGP_WSBEiJ_P0071747 Ibsp protein_coding protein_coding MGP_WSBEiJ_T0011412.1 MGP_WSBEiJ_G0009569.1 mouse_genomes_project 5 126970661 126970924 + Gm23171 misc_RNA misc_RNA MGP_WSBEiJ_T0008006.1 MGP_WSBEiJ_G0006533.1 mouse_genomes_project 5 51747449 51749148 + lincRNA lincRNA MGP_WSBEiJ_T0004813.1 MGP_WSBEiJ_G0004134.1 mouse_genomes_project 5 153957104 153958847 - Gm43151 antisense antisense MGP_WSBEiJ_T0014460.1 MGP_WSBEiJ_G0012590.1 mouse_genomes_project 5 20114652 20115023 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014716.1 MGP_WSBEiJ_G0012846.1 mouse_genomes_project 5 139107930 139110232 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072619.1 MGP_WSBEiJ_G0029171.1 mouse_genomes_project 5 120090248 120130511 + MGP_WSBEiJ_P0072619 Tesc protein_coding protein_coding MGP_WSBEiJ_T0072620.1 MGP_WSBEiJ_G0029171.1 mouse_genomes_project 5 120090270 120130478 + MGP_WSBEiJ_P0072620 Tesc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072621.1 MGP_WSBEiJ_G0029171.1 mouse_genomes_project 5 120090375 120130503 + Tesc protein_coding retained_intron MGP_WSBEiJ_T0072622.1 MGP_WSBEiJ_G0029171.1 mouse_genomes_project 5 120101412 120130406 + Tesc protein_coding processed_transcript MGP_WSBEiJ_T0072623.1 MGP_WSBEiJ_G0029171.1 mouse_genomes_project 5 120109321 120122311 + Tesc protein_coding processed_transcript MGP_WSBEiJ_T0072624.1 MGP_WSBEiJ_G0029171.1 mouse_genomes_project 5 120109322 120115080 + Tesc protein_coding processed_transcript MGP_WSBEiJ_T0069793.1 MGP_WSBEiJ_G0028625.1 mouse_genomes_project 5 30466697 30536681 + MGP_WSBEiJ_P0069793 Yes1 protein_coding protein_coding MGP_WSBEiJ_T0069794.1 MGP_WSBEiJ_G0028625.1 mouse_genomes_project 5 30466896 30538979 + MGP_WSBEiJ_P0069794 Yes1 protein_coding protein_coding MGP_WSBEiJ_T0069795.1 MGP_WSBEiJ_G0028625.1 mouse_genomes_project 5 30466910 30469652 + Yes1 protein_coding retained_intron MGP_WSBEiJ_T0069796.1 MGP_WSBEiJ_G0028625.1 mouse_genomes_project 5 30493805 30508211 + MGP_WSBEiJ_P0069796 Yes1 protein_coding protein_coding MGP_WSBEiJ_T0072627.1 MGP_WSBEiJ_G0029173.1 mouse_genomes_project 5 120239732 120267282 + Hrk protein_coding processed_transcript MGP_WSBEiJ_T0072628.1 MGP_WSBEiJ_G0029173.1 mouse_genomes_project 5 120247022 120271924 + MGP_WSBEiJ_P0072628 Hrk protein_coding protein_coding MGP_WSBEiJ_T0097407.1 MGP_WSBEiJ_G0036081.1 mouse_genomes_project 5 21151922 21152737 - Gm43566 sense_intronic sense_intronic MGP_WSBEiJ_T0011634.1 MGP_WSBEiJ_G0009768.1 mouse_genomes_project 5 123082557 123104192 + Oas1b polymorphic_pseudogene processed_transcript MGP_WSBEiJ_T0011635.1 MGP_WSBEiJ_G0009768.1 mouse_genomes_project 5 123082560 123113793 + MGP_WSBEiJ_P0011635 Oas1b polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0068822.1 MGP_WSBEiJ_G0028458.1 mouse_genomes_project 5 699509 711544 + MGP_WSBEiJ_P0068822 Lrrd1 protein_coding protein_coding MGP_WSBEiJ_T0068823.1 MGP_WSBEiJ_G0028458.1 mouse_genomes_project 5 699523 704446 + MGP_WSBEiJ_P0068823 Lrrd1 protein_coding protein_coding MGP_WSBEiJ_T0072584.1 MGP_WSBEiJ_G0029164.1 mouse_genomes_project 5 119297530 119302997 - MGP_WSBEiJ_P0072584 Pebp1 protein_coding protein_coding MGP_WSBEiJ_T0072585.1 MGP_WSBEiJ_G0029164.1 mouse_genomes_project 5 119298711 119302940 - MGP_WSBEiJ_P0072585 Pebp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072586.1 MGP_WSBEiJ_G0029164.1 mouse_genomes_project 5 119301165 119302897 - Pebp1 protein_coding retained_intron MGP_WSBEiJ_T0007929.1 MGP_WSBEiJ_G0006480.1 mouse_genomes_project 5 20843988 20845517 + 4930580E04Rik lincRNA lincRNA MGP_WSBEiJ_T0004766.1 MGP_WSBEiJ_G0004100.1 mouse_genomes_project 5 133262775 133265390 - Gm42469 antisense antisense MGP_WSBEiJ_T0001432.1 MGP_WSBEiJ_G0001360.1 mouse_genomes_project 5 19346080 19347979 - TEC TEC MGP_WSBEiJ_T0011405.1 MGP_WSBEiJ_G0009562.1 mouse_genomes_project 5 112762462 112762573 - Gm27602 misc_RNA misc_RNA MGP_WSBEiJ_T0071148.1 MGP_WSBEiJ_G0028850.1 mouse_genomes_project 5 83149125 83232237 - MGP_WSBEiJ_P0071148 Tecrl protein_coding protein_coding MGP_WSBEiJ_T0071929.1 MGP_WSBEiJ_G0029040.1 mouse_genomes_project 5 109595486 109596691 - MGP_WSBEiJ_P0071929 Atp5k protein_coding protein_coding MGP_WSBEiJ_T0071930.1 MGP_WSBEiJ_G0029040.1 mouse_genomes_project 5 109595486 109596691 - MGP_WSBEiJ_P0071930 Atp5k protein_coding protein_coding MGP_WSBEiJ_T0071931.1 MGP_WSBEiJ_G0029040.1 mouse_genomes_project 5 109595488 109596640 - Atp5k protein_coding retained_intron MGP_WSBEiJ_T0007908.1 MGP_WSBEiJ_G0006465.1 mouse_genomes_project 5 1681638 1697602 - Gm42744 lincRNA lincRNA MGP_WSBEiJ_T0001442.1 MGP_WSBEiJ_G0001369.1 mouse_genomes_project 5 24877614 24880210 + TEC TEC MGP_WSBEiJ_T0071070.1 MGP_WSBEiJ_G0028837.1 mouse_genomes_project 5 76484191 76513516 - MGP_WSBEiJ_P0071070 Ppat protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071071.1 MGP_WSBEiJ_G0028837.1 mouse_genomes_project 5 76484218 76513522 - MGP_WSBEiJ_P0071071 Ppat protein_coding protein_coding MGP_WSBEiJ_T0071072.1 MGP_WSBEiJ_G0028837.1 mouse_genomes_project 5 76485995 76513109 - Ppat protein_coding retained_intron MGP_WSBEiJ_T0001681.1 MGP_WSBEiJ_G0001603.1 mouse_genomes_project 5 97496086 97496606 + TEC TEC MGP_WSBEiJ_T0001472.1 MGP_WSBEiJ_G0001397.1 mouse_genomes_project 5 33554698 33557403 - TEC TEC MGP_WSBEiJ_T0070389.1 MGP_WSBEiJ_G0028724.1 mouse_genomes_project 5 43775853 43888487 - MGP_WSBEiJ_P0070389 Fam184b protein_coding protein_coding MGP_WSBEiJ_T0070390.1 MGP_WSBEiJ_G0028724.1 mouse_genomes_project 5 43775854 43784394 - Fam184b protein_coding retained_intron MGP_WSBEiJ_T0014640.1 MGP_WSBEiJ_G0012770.1 mouse_genomes_project 5 100531557 100532015 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008139.1 MGP_WSBEiJ_G0006635.1 mouse_genomes_project 5 111675831 111685775 + Gm26718 lincRNA lincRNA MGP_WSBEiJ_T0070504.1 MGP_WSBEiJ_G0028741.1 mouse_genomes_project 5 51561507 51671422 - MGP_WSBEiJ_P0070504 Sel1l3 protein_coding protein_coding MGP_WSBEiJ_T0070505.1 MGP_WSBEiJ_G0028741.1 mouse_genomes_project 5 51602243 51671306 - Sel1l3 protein_coding retained_intron MGP_WSBEiJ_T0070506.1 MGP_WSBEiJ_G0028741.1 mouse_genomes_project 5 51610298 51613667 - Sel1l3 protein_coding retained_intron MGP_WSBEiJ_T0070507.1 MGP_WSBEiJ_G0028741.1 mouse_genomes_project 5 51612581 51630080 - Sel1l3 protein_coding processed_transcript MGP_WSBEiJ_T0070508.1 MGP_WSBEiJ_G0028741.1 mouse_genomes_project 5 51656199 51672580 - Sel1l3 protein_coding retained_intron MGP_WSBEiJ_T0069513.1 MGP_WSBEiJ_G0028586.1 mouse_genomes_project 5 28605640 28617973 + MGP_WSBEiJ_P0069513 Tmem214 protein_coding protein_coding MGP_WSBEiJ_T0069514.1 MGP_WSBEiJ_G0028586.1 mouse_genomes_project 5 28607259 28615838 + MGP_WSBEiJ_P0069514 Tmem214 protein_coding protein_coding MGP_WSBEiJ_T0069515.1 MGP_WSBEiJ_G0028586.1 mouse_genomes_project 5 28607261 28617158 + Tmem214 protein_coding retained_intron MGP_WSBEiJ_T0069516.1 MGP_WSBEiJ_G0028586.1 mouse_genomes_project 5 28607263 28616262 + Tmem214 protein_coding retained_intron MGP_WSBEiJ_T0069517.1 MGP_WSBEiJ_G0028586.1 mouse_genomes_project 5 28607992 28610280 + Tmem214 protein_coding retained_intron MGP_WSBEiJ_T0069518.1 MGP_WSBEiJ_G0028586.1 mouse_genomes_project 5 28610567 28612389 + Tmem214 protein_coding processed_transcript MGP_WSBEiJ_T0069519.1 MGP_WSBEiJ_G0028586.1 mouse_genomes_project 5 28610612 28616257 + Tmem214 protein_coding retained_intron MGP_WSBEiJ_T0073153.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819149 126822329 + MGP_WSBEiJ_P0073153 Ogfod2 protein_coding protein_coding MGP_WSBEiJ_T0073154.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819173 126821930 + Ogfod2 protein_coding retained_intron MGP_WSBEiJ_T0073155.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819173 126822322 + MGP_WSBEiJ_P0073155 Ogfod2 protein_coding protein_coding MGP_WSBEiJ_T0073156.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819177 126821351 + MGP_WSBEiJ_P0073156 Ogfod2 protein_coding protein_coding MGP_WSBEiJ_T0073157.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819192 126821219 + Ogfod2 protein_coding retained_intron MGP_WSBEiJ_T0073158.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819192 126821307 + MGP_WSBEiJ_P0073158 Ogfod2 protein_coding protein_coding MGP_WSBEiJ_T0073159.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819209 126821611 + MGP_WSBEiJ_P0073159 Ogfod2 protein_coding protein_coding MGP_WSBEiJ_T0073160.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819283 126821812 + MGP_WSBEiJ_P0073160 Ogfod2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073161.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126819657 126821062 + Ogfod2 protein_coding retained_intron MGP_WSBEiJ_T0073162.1 MGP_WSBEiJ_G0029265.1 mouse_genomes_project 5 126820146 126821727 + Ogfod2 protein_coding retained_intron MGP_WSBEiJ_T0069537.1 MGP_WSBEiJ_G0028588.1 mouse_genomes_project 5 28644558 28646464 - MGP_WSBEiJ_P0069537 Ost4 protein_coding protein_coding MGP_WSBEiJ_T0069538.1 MGP_WSBEiJ_G0028588.1 mouse_genomes_project 5 28645191 28646401 - MGP_WSBEiJ_P0069538 Ost4 protein_coding protein_coding MGP_WSBEiJ_T0004616.1 MGP_WSBEiJ_G0003993.1 mouse_genomes_project 5 51498317 51499796 - Gm17182 antisense antisense MGP_WSBEiJ_T0008330.1 MGP_WSBEiJ_G0006764.1 mouse_genomes_project 5 153765616 153779099 - Gm29264 lincRNA lincRNA MGP_WSBEiJ_T0007920.1 MGP_WSBEiJ_G0006475.1 mouse_genomes_project 5 14010968 14013109 + Gm28710 lincRNA lincRNA MGP_WSBEiJ_T0008021.1 MGP_WSBEiJ_G0006545.1 mouse_genomes_project 5 63623438 63641399 - Gm3716 lincRNA lincRNA MGP_WSBEiJ_T0008022.1 MGP_WSBEiJ_G0006545.1 mouse_genomes_project 5 63624809 63632609 - Gm3716 lincRNA lincRNA MGP_WSBEiJ_T0071548.1 MGP_WSBEiJ_G0028957.1 mouse_genomes_project 5 97957354 97967525 - MGP_WSBEiJ_P0071548 Naa11 protein_coding protein_coding MGP_WSBEiJ_T0007988.1 MGP_WSBEiJ_G0006516.1 mouse_genomes_project 5 41243905 41248236 - Gm42711 lincRNA lincRNA MGP_WSBEiJ_T0001835.1 MGP_WSBEiJ_G0001755.1 mouse_genomes_project 5 137526960 137530640 - TEC TEC MGP_WSBEiJ_T0073356.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131922460 131947509 - MGP_WSBEiJ_P0073356 Stx2 protein_coding protein_coding MGP_WSBEiJ_T0073357.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131922466 131947470 - MGP_WSBEiJ_P0073357 Stx2 protein_coding protein_coding MGP_WSBEiJ_T0073358.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131924058 131927062 - Stx2 protein_coding retained_intron MGP_WSBEiJ_T0073359.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131926568 131927752 - Stx2 protein_coding retained_intron MGP_WSBEiJ_T0073360.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131926811 131947358 - Stx2 protein_coding processed_transcript MGP_WSBEiJ_T0073361.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131928543 131947484 - Stx2 protein_coding retained_intron MGP_WSBEiJ_T0073362.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131931398 131947379 - MGP_WSBEiJ_P0073362 Stx2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073363.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131931412 131937529 - MGP_WSBEiJ_P0073363 Stx2 protein_coding protein_coding MGP_WSBEiJ_T0073364.1 MGP_WSBEiJ_G0029299.1 mouse_genomes_project 5 131936981 131947481 - Stx2 protein_coding retained_intron MGP_WSBEiJ_T0074439.1 MGP_WSBEiJ_G0029501.1 mouse_genomes_project 5 147289799 147310088 - MGP_WSBEiJ_P0074439 Zfp316 protein_coding protein_coding MGP_WSBEiJ_T0074440.1 MGP_WSBEiJ_G0029501.1 mouse_genomes_project 5 147290391 147296303 - Zfp316 protein_coding retained_intron MGP_WSBEiJ_T0074441.1 MGP_WSBEiJ_G0029501.1 mouse_genomes_project 5 147293311 147304724 - MGP_WSBEiJ_P0074441 Zfp316 protein_coding protein_coding MGP_WSBEiJ_T0017556.1 MGP_WSBEiJ_G0015020.1 mouse_genomes_project 5 56291165 56455623 - 4932441J04Rik processed_transcript antisense MGP_WSBEiJ_T0017557.1 MGP_WSBEiJ_G0015020.1 mouse_genomes_project 5 56453838 56457906 - 4932441J04Rik processed_transcript retained_intron MGP_WSBEiJ_T0008161.1 MGP_WSBEiJ_G0006647.1 mouse_genomes_project 5 113760001 113763241 + 1700028D13Rik lincRNA lincRNA MGP_WSBEiJ_T0008162.1 MGP_WSBEiJ_G0006647.1 mouse_genomes_project 5 113760044 113763243 + 1700028D13Rik lincRNA lincRNA MGP_WSBEiJ_T0071810.1 MGP_WSBEiJ_G0029017.1 mouse_genomes_project 5 107911859 107966375 - MGP_WSBEiJ_P0071810 Hfm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071811.1 MGP_WSBEiJ_G0029017.1 mouse_genomes_project 5 107911861 107998513 - MGP_WSBEiJ_P0071811 Hfm1 protein_coding protein_coding MGP_WSBEiJ_T0071812.1 MGP_WSBEiJ_G0029017.1 mouse_genomes_project 5 107911864 107998070 - MGP_WSBEiJ_P0071812 Hfm1 protein_coding protein_coding MGP_WSBEiJ_T0071813.1 MGP_WSBEiJ_G0029017.1 mouse_genomes_project 5 107912326 107998642 - MGP_WSBEiJ_P0071813 Hfm1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071814.1 MGP_WSBEiJ_G0029017.1 mouse_genomes_project 5 107913231 107959918 - MGP_WSBEiJ_P0071814 Hfm1 protein_coding protein_coding MGP_WSBEiJ_T0071815.1 MGP_WSBEiJ_G0029017.1 mouse_genomes_project 5 107973173 107998447 - Hfm1 protein_coding retained_intron MGP_WSBEiJ_T0071816.1 MGP_WSBEiJ_G0029017.1 mouse_genomes_project 5 107973173 107998070 - MGP_WSBEiJ_P0071816 Hfm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071817.1 MGP_WSBEiJ_G0029017.1 mouse_genomes_project 5 107973357 107998032 - MGP_WSBEiJ_P0071817 Hfm1 protein_coding protein_coding MGP_WSBEiJ_T0070125.1 MGP_WSBEiJ_G0028675.1 mouse_genomes_project 5 34033468 34437669 - MGP_WSBEiJ_P0070125 Sorcs2 protein_coding protein_coding MGP_WSBEiJ_T0070126.1 MGP_WSBEiJ_G0028675.1 mouse_genomes_project 5 34078190 34437652 - Sorcs2 protein_coding retained_intron MGP_WSBEiJ_T0070127.1 MGP_WSBEiJ_G0028675.1 mouse_genomes_project 5 34082510 34296975 - MGP_WSBEiJ_P0070127 Sorcs2 protein_coding protein_coding MGP_WSBEiJ_T0070128.1 MGP_WSBEiJ_G0028675.1 mouse_genomes_project 5 34172428 34437684 - MGP_WSBEiJ_P0070128 Sorcs2 protein_coding protein_coding MGP_WSBEiJ_T0070129.1 MGP_WSBEiJ_G0028675.1 mouse_genomes_project 5 34173458 34402319 - Sorcs2 protein_coding processed_transcript MGP_WSBEiJ_T0008085.1 MGP_WSBEiJ_G0006598.1 mouse_genomes_project 5 99180372 99198524 - 1700010H22Rik lincRNA lincRNA MGP_WSBEiJ_T0008086.1 MGP_WSBEiJ_G0006598.1 mouse_genomes_project 5 99193304 99198602 - 1700010H22Rik lincRNA lincRNA MGP_WSBEiJ_T0008087.1 MGP_WSBEiJ_G0006598.1 mouse_genomes_project 5 99194720 99198360 - 1700010H22Rik lincRNA lincRNA MGP_WSBEiJ_T0070023.1 MGP_WSBEiJ_G0028659.1 mouse_genomes_project 5 32633016 32727316 + MGP_WSBEiJ_P0070023 Grk4 protein_coding protein_coding MGP_WSBEiJ_T0070024.1 MGP_WSBEiJ_G0028659.1 mouse_genomes_project 5 32633590 32677647 + MGP_WSBEiJ_P0070024 Grk4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0070025.1 MGP_WSBEiJ_G0028659.1 mouse_genomes_project 5 32633612 32648616 + MGP_WSBEiJ_P0070025 Grk4 protein_coding protein_coding MGP_WSBEiJ_T0070026.1 MGP_WSBEiJ_G0028659.1 mouse_genomes_project 5 32686895 32717526 + Grk4 protein_coding processed_transcript MGP_WSBEiJ_T0070027.1 MGP_WSBEiJ_G0028659.1 mouse_genomes_project 5 32716631 32727318 + Grk4 protein_coding processed_transcript MGP_WSBEiJ_T0068847.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 1703063 2189569 - MGP_WSBEiJ_P0068847 Cdk14 protein_coding protein_coding MGP_WSBEiJ_T0068848.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 1703063 2309536 - MGP_WSBEiJ_P0068848 Cdk14 protein_coding protein_coding MGP_WSBEiJ_T0068849.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 1705504 2188812 - MGP_WSBEiJ_P0068849 Cdk14 protein_coding protein_coding MGP_WSBEiJ_T0068850.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 1706359 2189666 - MGP_WSBEiJ_P0068850 Cdk14 protein_coding protein_coding MGP_WSBEiJ_T0068851.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 1792551 1795970 - Cdk14 protein_coding retained_intron MGP_WSBEiJ_T0068852.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 1831213 2189483 - Cdk14 protein_coding retained_intron MGP_WSBEiJ_T0068853.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 1842695 1946692 - Cdk14 protein_coding processed_transcript MGP_WSBEiJ_T0068854.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 1918888 2309563 - Cdk14 protein_coding retained_intron MGP_WSBEiJ_T0068855.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 2005675 2309590 - Cdk14 protein_coding retained_intron MGP_WSBEiJ_T0068856.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 2042209 2309532 - Cdk14 protein_coding retained_intron MGP_WSBEiJ_T0068857.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 2097442 2108208 - Cdk14 protein_coding processed_transcript MGP_WSBEiJ_T0068858.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 2148816 2189793 - MGP_WSBEiJ_P0068858 Cdk14 protein_coding protein_coding MGP_WSBEiJ_T0068859.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 2148817 2349553 - MGP_WSBEiJ_P0068859 Cdk14 protein_coding protein_coding MGP_WSBEiJ_T0068860.1 MGP_WSBEiJ_G0028464.1 mouse_genomes_project 5 2172674 2189804 - Cdk14 protein_coding processed_transcript MGP_WSBEiJ_T0017575.1 MGP_WSBEiJ_G0015026.1 mouse_genomes_project 5 75842141 75852616 + 4930432L08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0072388.1 MGP_WSBEiJ_G0029127.1 mouse_genomes_project 5 116596542 116609808 - MGP_WSBEiJ_P0072388 protein_coding protein_coding MGP_WSBEiJ_T0014538.1 MGP_WSBEiJ_G0012668.1 mouse_genomes_project 5 53093165 53104031 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074405.1 MGP_WSBEiJ_G0029495.1 mouse_genomes_project 5 146911570 146916412 - MGP_WSBEiJ_P0074405 Actb protein_coding protein_coding MGP_WSBEiJ_T0074406.1 MGP_WSBEiJ_G0029495.1 mouse_genomes_project 5 146913539 146916360 - MGP_WSBEiJ_P0074406 Actb protein_coding protein_coding MGP_WSBEiJ_T0074407.1 MGP_WSBEiJ_G0029495.1 mouse_genomes_project 5 146914235 146915706 - MGP_WSBEiJ_P0074407 Actb protein_coding protein_coding MGP_WSBEiJ_T0074408.1 MGP_WSBEiJ_G0029495.1 mouse_genomes_project 5 146914279 146916383 - Actb protein_coding processed_transcript MGP_WSBEiJ_T0074409.1 MGP_WSBEiJ_G0029495.1 mouse_genomes_project 5 146914556 146916380 - MGP_WSBEiJ_P0074409 Actb protein_coding protein_coding MGP_WSBEiJ_T0074410.1 MGP_WSBEiJ_G0029495.1 mouse_genomes_project 5 146914589 146915822 - MGP_WSBEiJ_P0074410 Actb protein_coding protein_coding MGP_WSBEiJ_T0074411.1 MGP_WSBEiJ_G0029495.1 mouse_genomes_project 5 146914650 146916330 - Actb protein_coding retained_intron MGP_WSBEiJ_T0074412.1 MGP_WSBEiJ_G0029495.1 mouse_genomes_project 5 146914757 146916352 - Actb protein_coding retained_intron MGP_WSBEiJ_T0017605.1 MGP_WSBEiJ_G0015036.1 mouse_genomes_project 5 142870725 142873916 - Gm15672 processed_transcript processed_transcript MGP_WSBEiJ_T0011388.1 MGP_WSBEiJ_G0009545.1 mouse_genomes_project 5 5956282 5956424 - Gm27941 misc_RNA misc_RNA MGP_WSBEiJ_T0070892.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72370223 72423379 - MGP_WSBEiJ_P0070892 Fryl protein_coding protein_coding MGP_WSBEiJ_T0070893.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72371430 72423781 - Fryl protein_coding retained_intron MGP_WSBEiJ_T0070894.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72371501 72512245 - MGP_WSBEiJ_P0070894 Fryl protein_coding protein_coding MGP_WSBEiJ_T0070895.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72393406 72442623 - MGP_WSBEiJ_P0070895 Fryl protein_coding protein_coding MGP_WSBEiJ_T0070896.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72399425 72402418 - Fryl protein_coding retained_intron MGP_WSBEiJ_T0070897.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72399528 72437494 - Fryl protein_coding processed_transcript MGP_WSBEiJ_T0070898.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72405800 72406731 - Fryl protein_coding retained_intron MGP_WSBEiJ_T0070899.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72416550 72417428 - Fryl protein_coding retained_intron MGP_WSBEiJ_T0070900.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72417618 72423503 - MGP_WSBEiJ_P0070900 Fryl protein_coding protein_coding MGP_WSBEiJ_T0070901.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72426920 72430035 - Fryl protein_coding retained_intron MGP_WSBEiJ_T0070902.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72452715 72453709 - MGP_WSBEiJ_P0070902 Fryl protein_coding protein_coding MGP_WSBEiJ_T0070903.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72454844 72531000 - Fryl protein_coding retained_intron MGP_WSBEiJ_T0070904.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72465830 72477894 - MGP_WSBEiJ_P0070904 Fryl protein_coding protein_coding MGP_WSBEiJ_T0070905.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72476376 72480297 - MGP_WSBEiJ_P0070905 Fryl protein_coding protein_coding MGP_WSBEiJ_T0070906.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72477306 72625983 - Fryl protein_coding retained_intron MGP_WSBEiJ_T0070907.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72508149 72555560 - MGP_WSBEiJ_P0070907 Fryl protein_coding protein_coding MGP_WSBEiJ_T0070908.1 MGP_WSBEiJ_G0028810.1 mouse_genomes_project 5 72557482 72626147 - Fryl protein_coding retained_intron MGP_WSBEiJ_T0001712.1 MGP_WSBEiJ_G0001634.1 mouse_genomes_project 5 109768398 109770510 - TEC TEC MGP_WSBEiJ_T0008069.1 MGP_WSBEiJ_G0006583.1 mouse_genomes_project 5 91582872 91609987 - Gm19619 lincRNA lincRNA MGP_WSBEiJ_T0097418.1 MGP_WSBEiJ_G0036092.1 mouse_genomes_project 5 106592458 106593770 + C230066G23Rik sense_intronic sense_intronic MGP_WSBEiJ_T0001488.1 MGP_WSBEiJ_G0001413.1 mouse_genomes_project 5 41975362 41977875 + TEC TEC MGP_WSBEiJ_T0010505.1 MGP_WSBEiJ_G0008662.1 mouse_genomes_project 5 32998735 32998802 + Mir3097 miRNA miRNA MGP_WSBEiJ_T0014672.1 MGP_WSBEiJ_G0012802.1 mouse_genomes_project 5 110216828 110217546 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001502.1 MGP_WSBEiJ_G0001427.1 mouse_genomes_project 5 42911949 42915163 - TEC TEC MGP_WSBEiJ_T0074368.1 MGP_WSBEiJ_G0029487.1 mouse_genomes_project 5 146434690 146437301 + MGP_WSBEiJ_P0074368 Ap5z1 protein_coding protein_coding MGP_WSBEiJ_T0074369.1 MGP_WSBEiJ_G0029487.1 mouse_genomes_project 5 146434745 146446498 + Ap5z1 protein_coding processed_transcript MGP_WSBEiJ_T0074370.1 MGP_WSBEiJ_G0029487.1 mouse_genomes_project 5 146434790 146441533 + MGP_WSBEiJ_P0074370 Ap5z1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074371.1 MGP_WSBEiJ_G0029487.1 mouse_genomes_project 5 146434800 146452994 + MGP_WSBEiJ_P0074371 Ap5z1 protein_coding protein_coding MGP_WSBEiJ_T0074372.1 MGP_WSBEiJ_G0029487.1 mouse_genomes_project 5 146434807 146452086 + Ap5z1 protein_coding retained_intron MGP_WSBEiJ_T0074373.1 MGP_WSBEiJ_G0029487.1 mouse_genomes_project 5 146434820 146452338 + MGP_WSBEiJ_P0074373 Ap5z1 protein_coding protein_coding MGP_WSBEiJ_T0074374.1 MGP_WSBEiJ_G0029487.1 mouse_genomes_project 5 146448382 146450037 + Ap5z1 protein_coding retained_intron MGP_WSBEiJ_T0011393.1 MGP_WSBEiJ_G0009550.1 mouse_genomes_project 5 29680489 29680791 + Gm24436 misc_RNA misc_RNA MGP_WSBEiJ_T0001644.1 MGP_WSBEiJ_G0001566.1 mouse_genomes_project 5 72551646 72554104 - TEC TEC MGP_WSBEiJ_T0072257.1 MGP_WSBEiJ_G0029105.1 mouse_genomes_project 5 115505128 115506153 - MGP_WSBEiJ_P0072257 Selplg protein_coding protein_coding MGP_WSBEiJ_T0072258.1 MGP_WSBEiJ_G0029105.1 mouse_genomes_project 5 115505139 115516463 - MGP_WSBEiJ_P0072258 Selplg protein_coding protein_coding MGP_WSBEiJ_T0072259.1 MGP_WSBEiJ_G0029105.1 mouse_genomes_project 5 115505147 115505910 - MGP_WSBEiJ_P0072259 Selplg protein_coding protein_coding MGP_WSBEiJ_T0072260.1 MGP_WSBEiJ_G0029105.1 mouse_genomes_project 5 115505147 115505850 - MGP_WSBEiJ_P0072260 Selplg protein_coding protein_coding MGP_WSBEiJ_T0072261.1 MGP_WSBEiJ_G0029105.1 mouse_genomes_project 5 115506638 115518610 - MGP_WSBEiJ_P0072261 Selplg protein_coding protein_coding MGP_WSBEiJ_T0072262.1 MGP_WSBEiJ_G0029105.1 mouse_genomes_project 5 115514120 115516434 - Selplg protein_coding retained_intron MGP_WSBEiJ_T0098345.1 MGP_WSBEiJ_G0037008.1 mouse_genomes_project 5 65332248 65332355 - Gm22929 snRNA snRNA MGP_WSBEiJ_T0008259.1 MGP_WSBEiJ_G0006709.1 mouse_genomes_project 5 131331092 131337318 + lincRNA lincRNA MGP_WSBEiJ_T0014707.1 MGP_WSBEiJ_G0012837.1 mouse_genomes_project 5 126109450 126109828 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008173.1 MGP_WSBEiJ_G0006652.1 mouse_genomes_project 5 114235417 114238173 + Gm42864 lincRNA lincRNA MGP_WSBEiJ_T0008127.1 MGP_WSBEiJ_G0006627.1 mouse_genomes_project 5 107633828 107634341 + Gm29464 lincRNA lincRNA MGP_WSBEiJ_T0072719.1 MGP_WSBEiJ_G0029195.1 mouse_genomes_project 5 123138305 123149201 + MGP_WSBEiJ_P0072719 protein_coding protein_coding MGP_WSBEiJ_T0072720.1 MGP_WSBEiJ_G0029195.1 mouse_genomes_project 5 123139308 123149077 + MGP_WSBEiJ_P0072720 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001491.1 MGP_WSBEiJ_G0001416.1 mouse_genomes_project 5 42154653 42155195 - TEC TEC MGP_WSBEiJ_T0001521.1 MGP_WSBEiJ_G0001446.1 mouse_genomes_project 5 47132229 47133520 - TEC TEC MGP_WSBEiJ_T0001481.1 MGP_WSBEiJ_G0001406.1 mouse_genomes_project 5 39470699 39472367 + TEC TEC MGP_WSBEiJ_T0072897.1 MGP_WSBEiJ_G0029226.1 mouse_genomes_project 5 124924885 124932930 - MGP_WSBEiJ_P0072897 Fam216a protein_coding protein_coding MGP_WSBEiJ_T0014612.1 MGP_WSBEiJ_G0012742.1 mouse_genomes_project 5 87446257 87446869 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001507.1 MGP_WSBEiJ_G0001432.1 mouse_genomes_project 5 43946836 43948866 + TEC TEC MGP_WSBEiJ_T0074603.1 MGP_WSBEiJ_G0029537.1 mouse_genomes_project 5 149316836 149332176 + MGP_WSBEiJ_P0074603 Cpsf4 protein_coding protein_coding MGP_WSBEiJ_T0074604.1 MGP_WSBEiJ_G0029537.1 mouse_genomes_project 5 149316847 149332176 + MGP_WSBEiJ_P0074604 Cpsf4 protein_coding protein_coding MGP_WSBEiJ_T0074605.1 MGP_WSBEiJ_G0029537.1 mouse_genomes_project 5 149316870 149332175 + MGP_WSBEiJ_P0074605 Cpsf4 protein_coding protein_coding MGP_WSBEiJ_T0074606.1 MGP_WSBEiJ_G0029537.1 mouse_genomes_project 5 149316877 149331888 + MGP_WSBEiJ_P0074606 Cpsf4 protein_coding protein_coding MGP_WSBEiJ_T0074607.1 MGP_WSBEiJ_G0029537.1 mouse_genomes_project 5 149316891 149331367 + MGP_WSBEiJ_P0074607 Cpsf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074608.1 MGP_WSBEiJ_G0029537.1 mouse_genomes_project 5 149317078 149331488 + MGP_WSBEiJ_P0074608 Cpsf4 protein_coding protein_coding MGP_WSBEiJ_T0074609.1 MGP_WSBEiJ_G0029537.1 mouse_genomes_project 5 149320727 149332176 + Cpsf4 protein_coding retained_intron MGP_WSBEiJ_T0014643.1 MGP_WSBEiJ_G0012773.1 mouse_genomes_project 5 102099074 102099366 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008332.1 MGP_WSBEiJ_G0006765.1 mouse_genomes_project 5 153897919 153925187 + BC028471 lincRNA lincRNA MGP_WSBEiJ_T0008333.1 MGP_WSBEiJ_G0006765.1 mouse_genomes_project 5 153899331 153908349 + BC028471 lincRNA lincRNA MGP_WSBEiJ_T0008334.1 MGP_WSBEiJ_G0006765.1 mouse_genomes_project 5 153899333 153917907 + BC028471 lincRNA lincRNA MGP_WSBEiJ_T0008335.1 MGP_WSBEiJ_G0006765.1 mouse_genomes_project 5 153899548 153924077 + BC028471 lincRNA lincRNA MGP_WSBEiJ_T0008336.1 MGP_WSBEiJ_G0006765.1 mouse_genomes_project 5 153908314 153925187 + BC028471 lincRNA lincRNA MGP_WSBEiJ_T0008337.1 MGP_WSBEiJ_G0006765.1 mouse_genomes_project 5 153908326 153909148 + BC028471 lincRNA lincRNA MGP_WSBEiJ_T0014542.1 MGP_WSBEiJ_G0012672.1 mouse_genomes_project 5 54182269 54182576 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008121.1 MGP_WSBEiJ_G0006622.1 mouse_genomes_project 5 107396458 107409244 + Gm42914 lincRNA lincRNA MGP_WSBEiJ_T0071953.1 MGP_WSBEiJ_G0029045.1 mouse_genomes_project 5 109802981 109819818 + MGP_WSBEiJ_P0071953 Tmem175 protein_coding protein_coding MGP_WSBEiJ_T0071954.1 MGP_WSBEiJ_G0029045.1 mouse_genomes_project 5 109803043 109824570 + MGP_WSBEiJ_P0071954 Tmem175 protein_coding protein_coding MGP_WSBEiJ_T0071955.1 MGP_WSBEiJ_G0029045.1 mouse_genomes_project 5 109803213 109823051 + MGP_WSBEiJ_P0071955 Tmem175 protein_coding protein_coding MGP_WSBEiJ_T0071956.1 MGP_WSBEiJ_G0029045.1 mouse_genomes_project 5 109803220 109822459 + MGP_WSBEiJ_P0071956 Tmem175 protein_coding protein_coding MGP_WSBEiJ_T0071957.1 MGP_WSBEiJ_G0029045.1 mouse_genomes_project 5 109803492 109820891 + MGP_WSBEiJ_P0071957 Tmem175 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071958.1 MGP_WSBEiJ_G0029045.1 mouse_genomes_project 5 109817467 109818983 + Tmem175 protein_coding retained_intron MGP_WSBEiJ_T0071959.1 MGP_WSBEiJ_G0029045.1 mouse_genomes_project 5 109820112 109820904 + Tmem175 protein_coding processed_transcript MGP_WSBEiJ_T0074358.1 MGP_WSBEiJ_G0029483.1 mouse_genomes_project 5 144649127 144718906 - MGP_WSBEiJ_P0074358 Gna12 protein_coding protein_coding MGP_WSBEiJ_T0072043.1 MGP_WSBEiJ_G0029063.1 mouse_genomes_project 5 111675797 111685841 - MGP_WSBEiJ_P0072043 Pgam5 protein_coding protein_coding MGP_WSBEiJ_T0072044.1 MGP_WSBEiJ_G0029063.1 mouse_genomes_project 5 111675823 111685815 - MGP_WSBEiJ_P0072044 Pgam5 protein_coding protein_coding MGP_WSBEiJ_T0072045.1 MGP_WSBEiJ_G0029063.1 mouse_genomes_project 5 111681067 111681867 - Pgam5 protein_coding retained_intron MGP_WSBEiJ_T0072046.1 MGP_WSBEiJ_G0029063.1 mouse_genomes_project 5 111681413 111685782 - MGP_WSBEiJ_P0072046 Pgam5 protein_coding protein_coding MGP_WSBEiJ_T0070157.1 MGP_WSBEiJ_G0028681.1 mouse_genomes_project 5 34655511 34726803 - MGP_WSBEiJ_P0070157 D5Ertd579e protein_coding protein_coding MGP_WSBEiJ_T0070158.1 MGP_WSBEiJ_G0028681.1 mouse_genomes_project 5 34657280 34668756 - MGP_WSBEiJ_P0070158 D5Ertd579e protein_coding protein_coding MGP_WSBEiJ_T0070159.1 MGP_WSBEiJ_G0028681.1 mouse_genomes_project 5 34670981 34676283 - D5Ertd579e protein_coding processed_transcript MGP_WSBEiJ_T0070160.1 MGP_WSBEiJ_G0028681.1 mouse_genomes_project 5 34672890 34726827 - D5Ertd579e protein_coding retained_intron MGP_WSBEiJ_T0070161.1 MGP_WSBEiJ_G0028681.1 mouse_genomes_project 5 34682093 34726803 - D5Ertd579e protein_coding retained_intron MGP_WSBEiJ_T0070162.1 MGP_WSBEiJ_G0028681.1 mouse_genomes_project 5 34697735 34726890 - MGP_WSBEiJ_P0070162 D5Ertd579e protein_coding protein_coding MGP_WSBEiJ_T0070163.1 MGP_WSBEiJ_G0028681.1 mouse_genomes_project 5 34719885 34726836 - D5Ertd579e protein_coding retained_intron MGP_WSBEiJ_T0097439.1 MGP_WSBEiJ_G0036109.1 mouse_genomes_project 5 155386029 155387804 + Gm43807 sense_intronic sense_intronic MGP_WSBEiJ_T0074610.1 MGP_WSBEiJ_G0029538.1 mouse_genomes_project 5 149333825 149343046 - MGP_WSBEiJ_P0074610 Atp5j2 protein_coding protein_coding MGP_WSBEiJ_T0074611.1 MGP_WSBEiJ_G0029538.1 mouse_genomes_project 5 149333833 149342576 - MGP_WSBEiJ_P0074611 Atp5j2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074612.1 MGP_WSBEiJ_G0029538.1 mouse_genomes_project 5 149333836 149342576 - MGP_WSBEiJ_P0074612 Atp5j2 protein_coding protein_coding MGP_WSBEiJ_T0074613.1 MGP_WSBEiJ_G0029538.1 mouse_genomes_project 5 149334513 149342495 - MGP_WSBEiJ_P0074613 Atp5j2 protein_coding protein_coding MGP_WSBEiJ_T0074614.1 MGP_WSBEiJ_G0029538.1 mouse_genomes_project 5 149340410 149342512 - Atp5j2 protein_coding retained_intron MGP_WSBEiJ_T0097071.1 MGP_WSBEiJ_G0035752.1 mouse_genomes_project 5 119205904 119206025 + n-R5s174 rRNA rRNA MGP_WSBEiJ_T0070680.1 MGP_WSBEiJ_G0028773.1 mouse_genomes_project 5 65076540 65113511 + MGP_WSBEiJ_P0070680 Chrna9 protein_coding protein_coding MGP_WSBEiJ_T0070681.1 MGP_WSBEiJ_G0028773.1 mouse_genomes_project 5 65076547 65115589 + MGP_WSBEiJ_P0070681 Chrna9 protein_coding protein_coding MGP_WSBEiJ_T0070682.1 MGP_WSBEiJ_G0028773.1 mouse_genomes_project 5 65076567 65077535 + Chrna9 protein_coding retained_intron MGP_WSBEiJ_T0070683.1 MGP_WSBEiJ_G0028773.1 mouse_genomes_project 5 65076592 65086948 + Chrna9 protein_coding processed_transcript MGP_WSBEiJ_T0070684.1 MGP_WSBEiJ_G0028773.1 mouse_genomes_project 5 65076594 65086964 + Chrna9 protein_coding processed_transcript MGP_WSBEiJ_T0070685.1 MGP_WSBEiJ_G0028773.1 mouse_genomes_project 5 65111149 65122450 + MGP_WSBEiJ_P0070685 Chrna9 protein_coding protein_coding MGP_WSBEiJ_T0070686.1 MGP_WSBEiJ_G0028773.1 mouse_genomes_project 5 65121019 65122264 + Chrna9 protein_coding processed_transcript MGP_WSBEiJ_T0004602.1 MGP_WSBEiJ_G0003983.1 mouse_genomes_project 5 42112078 42112749 - Gm16015 antisense antisense MGP_WSBEiJ_T0098381.1 MGP_WSBEiJ_G0037044.1 mouse_genomes_project 5 120038824 120038931 - Gm25343 snRNA snRNA MGP_WSBEiJ_T0098373.1 MGP_WSBEiJ_G0037036.1 mouse_genomes_project 5 107728903 107729025 + Gm24191 snRNA snRNA MGP_WSBEiJ_T0073017.1 MGP_WSBEiJ_G0029242.1 mouse_genomes_project 5 125757387 125766160 + Setd1b protein_coding retained_intron MGP_WSBEiJ_T0073018.1 MGP_WSBEiJ_G0029242.1 mouse_genomes_project 5 125757387 125784446 + MGP_WSBEiJ_P0073018 Setd1b protein_coding protein_coding MGP_WSBEiJ_T0073019.1 MGP_WSBEiJ_G0029242.1 mouse_genomes_project 5 125757387 125785632 + MGP_WSBEiJ_P0073019 Setd1b protein_coding protein_coding MGP_WSBEiJ_T0073020.1 MGP_WSBEiJ_G0029242.1 mouse_genomes_project 5 125759128 125784446 + MGP_WSBEiJ_P0073020 Setd1b protein_coding protein_coding MGP_WSBEiJ_T0073021.1 MGP_WSBEiJ_G0029242.1 mouse_genomes_project 5 125780230 125782511 + Setd1b protein_coding retained_intron MGP_WSBEiJ_T0073022.1 MGP_WSBEiJ_G0029242.1 mouse_genomes_project 5 125780903 125781630 + MGP_WSBEiJ_P0073022 Setd1b protein_coding protein_coding MGP_WSBEiJ_T0072812.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124196422 124311157 + MGP_WSBEiJ_P0072812 Atxn2 protein_coding protein_coding MGP_WSBEiJ_T0072813.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124234067 124264877 + Atxn2 protein_coding processed_transcript MGP_WSBEiJ_T0072814.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124237924 124311156 + MGP_WSBEiJ_P0072814 Atxn2 protein_coding protein_coding MGP_WSBEiJ_T0072815.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124270014 124288112 + MGP_WSBEiJ_P0072815 Atxn2 protein_coding protein_coding MGP_WSBEiJ_T0072816.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124273445 124276567 + Atxn2 protein_coding retained_intron MGP_WSBEiJ_T0072817.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124277151 124310928 + MGP_WSBEiJ_P0072817 Atxn2 protein_coding protein_coding MGP_WSBEiJ_T0072818.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124278318 124288523 + Atxn2 protein_coding retained_intron MGP_WSBEiJ_T0072819.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124290463 124299643 + Atxn2 protein_coding retained_intron MGP_WSBEiJ_T0072820.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124295451 124298473 + Atxn2 protein_coding processed_transcript MGP_WSBEiJ_T0072821.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124297953 124307159 + Atxn2 protein_coding retained_intron MGP_WSBEiJ_T0072822.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124298318 124305264 + Atxn2 protein_coding retained_intron MGP_WSBEiJ_T0072823.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124298437 124310839 + MGP_WSBEiJ_P0072823 Atxn2 protein_coding protein_coding MGP_WSBEiJ_T0072824.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124301786 124310941 + Atxn2 protein_coding retained_intron MGP_WSBEiJ_T0072825.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124302452 124309663 + MGP_WSBEiJ_P0072825 Atxn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072826.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124306871 124307741 + Atxn2 protein_coding retained_intron MGP_WSBEiJ_T0072827.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124307172 124308138 + Atxn2 protein_coding retained_intron MGP_WSBEiJ_T0072828.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124307667 124312700 + MGP_WSBEiJ_P0072828 Atxn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072829.1 MGP_WSBEiJ_G0029214.1 mouse_genomes_project 5 124307714 124311105 + MGP_WSBEiJ_P0072829 Atxn2 protein_coding protein_coding MGP_WSBEiJ_T0017531.1 MGP_WSBEiJ_G0015012.1 mouse_genomes_project 5 28311952 28327401 - Gm9899 processed_transcript lincRNA MGP_WSBEiJ_T0017532.1 MGP_WSBEiJ_G0015012.1 mouse_genomes_project 5 28315427 28315986 - Gm9899 processed_transcript pseudogene MGP_WSBEiJ_T0017533.1 MGP_WSBEiJ_G0015012.1 mouse_genomes_project 5 28315909 28317816 - Gm9899 processed_transcript retained_intron MGP_WSBEiJ_T0072638.1 MGP_WSBEiJ_G0029176.1 mouse_genomes_project 5 120671334 120834824 + Med13l protein_coding retained_intron MGP_WSBEiJ_T0072639.1 MGP_WSBEiJ_G0029176.1 mouse_genomes_project 5 120671374 120880165 + MGP_WSBEiJ_P0072639 Med13l protein_coding protein_coding MGP_WSBEiJ_T0072640.1 MGP_WSBEiJ_G0029176.1 mouse_genomes_project 5 120671394 120878642 + MGP_WSBEiJ_P0072640 Med13l protein_coding protein_coding MGP_WSBEiJ_T0072641.1 MGP_WSBEiJ_G0029176.1 mouse_genomes_project 5 120672236 120706092 + Med13l protein_coding processed_transcript MGP_WSBEiJ_T0072642.1 MGP_WSBEiJ_G0029176.1 mouse_genomes_project 5 120862079 120878642 + Med13l protein_coding retained_intron MGP_WSBEiJ_T0072643.1 MGP_WSBEiJ_G0029176.1 mouse_genomes_project 5 120865087 120878642 + Med13l protein_coding retained_intron MGP_WSBEiJ_T0099602.1 MGP_WSBEiJ_G0038265.1 mouse_genomes_project 5 78450564 78450700 + Gm25756 snoRNA snoRNA MGP_WSBEiJ_T0074345.1 MGP_WSBEiJ_G0029481.1 mouse_genomes_project 5 144580936 144596639 + MGP_WSBEiJ_P0074345 Brat1 protein_coding protein_coding MGP_WSBEiJ_T0074346.1 MGP_WSBEiJ_G0029481.1 mouse_genomes_project 5 144580948 144596591 + MGP_WSBEiJ_P0074346 Brat1 protein_coding protein_coding MGP_WSBEiJ_T0074347.1 MGP_WSBEiJ_G0029481.1 mouse_genomes_project 5 144580948 144596434 + MGP_WSBEiJ_P0074347 Brat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074348.1 MGP_WSBEiJ_G0029481.1 mouse_genomes_project 5 144580975 144593196 + Brat1 protein_coding retained_intron MGP_WSBEiJ_T0074349.1 MGP_WSBEiJ_G0029481.1 mouse_genomes_project 5 144580977 144592919 + Brat1 protein_coding retained_intron MGP_WSBEiJ_T0074350.1 MGP_WSBEiJ_G0029481.1 mouse_genomes_project 5 144580991 144596639 + MGP_WSBEiJ_P0074350 Brat1 protein_coding protein_coding MGP_WSBEiJ_T0073616.1 MGP_WSBEiJ_G0029339.1 mouse_genomes_project 5 137977239 138015158 - MGP_WSBEiJ_P0073616 Limk1 protein_coding protein_coding MGP_WSBEiJ_T0073617.1 MGP_WSBEiJ_G0029339.1 mouse_genomes_project 5 137977240 138002629 - MGP_WSBEiJ_P0073617 Limk1 protein_coding protein_coding MGP_WSBEiJ_T0073618.1 MGP_WSBEiJ_G0029339.1 mouse_genomes_project 5 137977399 138002601 - MGP_WSBEiJ_P0073618 Limk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073619.1 MGP_WSBEiJ_G0029339.1 mouse_genomes_project 5 137981276 137986914 - MGP_WSBEiJ_P0073619 Limk1 protein_coding protein_coding MGP_WSBEiJ_T0073620.1 MGP_WSBEiJ_G0029339.1 mouse_genomes_project 5 137986652 137991132 - Limk1 protein_coding retained_intron MGP_WSBEiJ_T0073621.1 MGP_WSBEiJ_G0029339.1 mouse_genomes_project 5 137990885 138015134 - Limk1 protein_coding retained_intron MGP_WSBEiJ_T0071590.1 MGP_WSBEiJ_G0028970.1 mouse_genomes_project 5 100734129 100736621 - Hnrnpdl protein_coding processed_transcript MGP_WSBEiJ_T0071591.1 MGP_WSBEiJ_G0028970.1 mouse_genomes_project 5 100734129 100739767 - MGP_WSBEiJ_P0071591 Hnrnpdl protein_coding protein_coding MGP_WSBEiJ_T0071592.1 MGP_WSBEiJ_G0028970.1 mouse_genomes_project 5 100735273 100739414 - MGP_WSBEiJ_P0071592 Hnrnpdl protein_coding protein_coding MGP_WSBEiJ_T0071593.1 MGP_WSBEiJ_G0028970.1 mouse_genomes_project 5 100735279 100740209 - MGP_WSBEiJ_P0071593 Hnrnpdl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071594.1 MGP_WSBEiJ_G0028970.1 mouse_genomes_project 5 100735380 100737278 - Hnrnpdl protein_coding retained_intron MGP_WSBEiJ_T0071595.1 MGP_WSBEiJ_G0028970.1 mouse_genomes_project 5 100735978 100739440 - MGP_WSBEiJ_P0071595 Hnrnpdl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071596.1 MGP_WSBEiJ_G0028970.1 mouse_genomes_project 5 100736512 100737674 - Hnrnpdl protein_coding retained_intron MGP_WSBEiJ_T0074816.1 MGP_WSBEiJ_G0029582.1 mouse_genomes_project 5 154605794 154656223 + Rxfp2 protein_coding retained_intron MGP_WSBEiJ_T0074817.1 MGP_WSBEiJ_G0029582.1 mouse_genomes_project 5 154605794 154669414 + MGP_WSBEiJ_P0074817 Rxfp2 protein_coding protein_coding MGP_WSBEiJ_T0074818.1 MGP_WSBEiJ_G0029582.1 mouse_genomes_project 5 154605794 154669414 + MGP_WSBEiJ_P0074818 Rxfp2 protein_coding protein_coding MGP_WSBEiJ_T0074819.1 MGP_WSBEiJ_G0029582.1 mouse_genomes_project 5 154605825 154669406 + MGP_WSBEiJ_P0074819 Rxfp2 protein_coding protein_coding MGP_WSBEiJ_T0074820.1 MGP_WSBEiJ_G0029582.1 mouse_genomes_project 5 154654039 154657525 + Rxfp2 protein_coding retained_intron MGP_WSBEiJ_T0074821.1 MGP_WSBEiJ_G0029582.1 mouse_genomes_project 5 154668743 154670262 + Rxfp2 protein_coding processed_transcript MGP_WSBEiJ_T0069389.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26883771 26890914 + MGP_WSBEiJ_P0069389 Rnf32 protein_coding protein_coding MGP_WSBEiJ_T0069390.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26883772 26915011 + MGP_WSBEiJ_P0069390 Rnf32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069391.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26883774 26886526 + MGP_WSBEiJ_P0069391 Rnf32 protein_coding protein_coding MGP_WSBEiJ_T0069392.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26883776 26915052 + MGP_WSBEiJ_P0069392 Rnf32 protein_coding protein_coding MGP_WSBEiJ_T0069393.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26883782 26890974 + MGP_WSBEiJ_P0069393 Rnf32 protein_coding protein_coding MGP_WSBEiJ_T0069394.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26883785 26915054 + MGP_WSBEiJ_P0069394 Rnf32 protein_coding protein_coding MGP_WSBEiJ_T0069395.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26883837 26895465 + Rnf32 protein_coding retained_intron MGP_WSBEiJ_T0069396.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26883863 26885770 + Rnf32 protein_coding processed_transcript MGP_WSBEiJ_T0069397.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26884366 26890863 + MGP_WSBEiJ_P0069397 Rnf32 protein_coding protein_coding MGP_WSBEiJ_T0069398.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26885784 26914821 + MGP_WSBEiJ_P0069398 Rnf32 protein_coding protein_coding MGP_WSBEiJ_T0069399.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26886449 26914831 + MGP_WSBEiJ_P0069399 Rnf32 protein_coding protein_coding MGP_WSBEiJ_T0069400.1 MGP_WSBEiJ_G0028562.1 mouse_genomes_project 5 26913291 26917987 + Rnf32 protein_coding retained_intron MGP_WSBEiJ_T0008129.1 MGP_WSBEiJ_G0006629.1 mouse_genomes_project 5 108764431 108787722 - Gm26692 lincRNA lincRNA MGP_WSBEiJ_T0008122.1 MGP_WSBEiJ_G0006623.1 mouse_genomes_project 5 107409572 107411991 - 4930432H08Rik lincRNA lincRNA MGP_WSBEiJ_T0071999.1 MGP_WSBEiJ_G0029056.1 mouse_genomes_project 5 111476876 111495149 - MGP_WSBEiJ_P0071999 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0010540.1 MGP_WSBEiJ_G0008697.1 mouse_genomes_project 5 123143103 123143229 - Gm22907 miRNA miRNA MGP_WSBEiJ_T0008296.1 MGP_WSBEiJ_G0006735.1 mouse_genomes_project 5 147262588 147273322 + 4930448H16Rik lincRNA lincRNA MGP_WSBEiJ_T0004609.1 MGP_WSBEiJ_G0003988.1 mouse_genomes_project 5 43670434 43686210 + Gm42413 antisense antisense MGP_WSBEiJ_T0014713.1 MGP_WSBEiJ_G0012843.1 mouse_genomes_project 5 137762941 137763151 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098359.1 MGP_WSBEiJ_G0037022.1 mouse_genomes_project 5 83577320 83577442 - Gm25806 snRNA snRNA MGP_WSBEiJ_T0070103.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33764357 33893931 + MGP_WSBEiJ_P0070103 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070104.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33764357 33894438 + MGP_WSBEiJ_P0070104 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070105.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33764401 33893614 + MGP_WSBEiJ_P0070105 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070106.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33764408 33894438 + MGP_WSBEiJ_P0070106 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070107.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33764408 33893930 + MGP_WSBEiJ_P0070107 Ablim2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070108.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33764443 33893931 + MGP_WSBEiJ_P0070108 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070109.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33764528 33892884 + MGP_WSBEiJ_P0070109 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070110.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33820804 33852258 + MGP_WSBEiJ_P0070110 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070111.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33820871 33892884 + MGP_WSBEiJ_P0070111 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070112.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33820885 33842155 + MGP_WSBEiJ_P0070112 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070113.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33835882 33884349 + MGP_WSBEiJ_P0070113 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070114.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33835913 33850582 + Ablim2 protein_coding retained_intron MGP_WSBEiJ_T0070115.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33835913 33866922 + MGP_WSBEiJ_P0070115 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070116.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33850403 33867249 + MGP_WSBEiJ_P0070116 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0070117.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33857839 33878941 + Ablim2 protein_coding retained_intron MGP_WSBEiJ_T0070118.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33866128 33867249 + Ablim2 protein_coding retained_intron MGP_WSBEiJ_T0070119.1 MGP_WSBEiJ_G0028673.1 mouse_genomes_project 5 33866956 33892984 + MGP_WSBEiJ_P0070119 Ablim2 protein_coding protein_coding MGP_WSBEiJ_T0069659.1 MGP_WSBEiJ_G0028607.1 mouse_genomes_project 5 28962448 28981213 - MGP_WSBEiJ_P0069659 Ppm1g protein_coding protein_coding MGP_WSBEiJ_T0069660.1 MGP_WSBEiJ_G0028607.1 mouse_genomes_project 5 28962452 28981335 - MGP_WSBEiJ_P0069660 Ppm1g protein_coding protein_coding MGP_WSBEiJ_T0069661.1 MGP_WSBEiJ_G0028607.1 mouse_genomes_project 5 28962886 28964868 - Ppm1g protein_coding retained_intron MGP_WSBEiJ_T0069663.1 MGP_WSBEiJ_G0028607.1 mouse_genomes_project 5 28964876 28967450 - MGP_WSBEiJ_P0069663 Ppm1g protein_coding protein_coding MGP_WSBEiJ_T0069664.1 MGP_WSBEiJ_G0028607.1 mouse_genomes_project 5 28979412 28981213 - Ppm1g protein_coding retained_intron MGP_WSBEiJ_T0072898.1 MGP_WSBEiJ_G0029227.1 mouse_genomes_project 5 124932441 124944099 + MGP_WSBEiJ_P0072898 Gpn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072899.1 MGP_WSBEiJ_G0029227.1 mouse_genomes_project 5 124933016 124944160 + MGP_WSBEiJ_P0072899 Gpn3 protein_coding protein_coding MGP_WSBEiJ_T0072900.1 MGP_WSBEiJ_G0029227.1 mouse_genomes_project 5 124933092 124940019 + Gpn3 protein_coding retained_intron MGP_WSBEiJ_T0072901.1 MGP_WSBEiJ_G0029227.1 mouse_genomes_project 5 124934550 124943580 + MGP_WSBEiJ_P0072901 Gpn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072902.1 MGP_WSBEiJ_G0029227.1 mouse_genomes_project 5 124942548 124944160 + MGP_WSBEiJ_P0072902 Gpn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072903.1 MGP_WSBEiJ_G0029227.1 mouse_genomes_project 5 124942573 124943813 + MGP_WSBEiJ_P0072903 Gpn3 protein_coding protein_coding MGP_WSBEiJ_T0008352.1 MGP_WSBEiJ_G0006777.1 mouse_genomes_project 5 156037441 156098968 - D730045B01Rik lincRNA lincRNA MGP_WSBEiJ_T0008353.1 MGP_WSBEiJ_G0006777.1 mouse_genomes_project 5 156038585 156038894 - D730045B01Rik lincRNA lincRNA MGP_WSBEiJ_T0070408.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295108 46635666 + MGP_WSBEiJ_P0070408 Slit2 protein_coding protein_coding MGP_WSBEiJ_T0070409.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295124 46302294 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070410.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295124 46503474 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070411.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295124 46633448 + MGP_WSBEiJ_P0070411 Slit2 protein_coding protein_coding MGP_WSBEiJ_T0070412.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295124 46633448 + MGP_WSBEiJ_P0070412 Slit2 protein_coding protein_coding MGP_WSBEiJ_T0070413.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295124 46633448 + MGP_WSBEiJ_P0070413 Slit2 protein_coding protein_coding MGP_WSBEiJ_T0070414.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295124 46632333 + MGP_WSBEiJ_P0070414 Slit2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070415.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295128 46399570 + Slit2 protein_coding processed_transcript MGP_WSBEiJ_T0070416.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46295147 46297639 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070417.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46296964 46493470 + Slit2 protein_coding processed_transcript MGP_WSBEiJ_T0070418.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46299803 46512041 + MGP_WSBEiJ_P0070418 Slit2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070419.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46489465 46513248 + Slit2 protein_coding processed_transcript MGP_WSBEiJ_T0070420.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46494545 46499340 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070421.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46502418 46542981 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070422.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46509941 46556014 + Slit2 protein_coding processed_transcript MGP_WSBEiJ_T0070423.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46548500 46565503 + Slit2 protein_coding processed_transcript MGP_WSBEiJ_T0070424.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46557378 46609985 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070425.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46565551 46586523 + MGP_WSBEiJ_P0070425 Slit2 protein_coding protein_coding MGP_WSBEiJ_T0070426.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46572170 46575024 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070427.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46575588 46589608 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070428.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46583528 46586477 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070429.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46602218 46608834 + Slit2 protein_coding retained_intron MGP_WSBEiJ_T0070430.1 MGP_WSBEiJ_G0028727.1 mouse_genomes_project 5 46608812 46630449 + MGP_WSBEiJ_P0070430 Slit2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074763.1 MGP_WSBEiJ_G0029573.1 mouse_genomes_project 5 153390764 153505014 - MGP_WSBEiJ_P0074763 Gm42791 protein_coding protein_coding MGP_WSBEiJ_T0074766.1 MGP_WSBEiJ_G0029573.1 mouse_genomes_project 5 153487909 153488524 - Gm42791 protein_coding processed_transcript MGP_WSBEiJ_T0004583.1 MGP_WSBEiJ_G0003968.1 mouse_genomes_project 5 32057752 32075176 + 4930557J02Rik antisense antisense MGP_WSBEiJ_T0007991.1 MGP_WSBEiJ_G0006519.1 mouse_genomes_project 5 41651935 41656085 + Gm43021 lincRNA lincRNA MGP_WSBEiJ_T0097067.1 MGP_WSBEiJ_G0035748.1 mouse_genomes_project 5 75505263 75505386 - Gm24738 rRNA rRNA MGP_WSBEiJ_T0072431.1 MGP_WSBEiJ_G0029138.1 mouse_genomes_project 5 116981340 116996439 - MGP_WSBEiJ_P0072431 Mlec protein_coding protein_coding MGP_WSBEiJ_T0072432.1 MGP_WSBEiJ_G0029138.1 mouse_genomes_project 5 116986469 116989357 - Mlec protein_coding processed_transcript MGP_WSBEiJ_T0011417.1 MGP_WSBEiJ_G0009574.1 mouse_genomes_project 5 153779368 153779661 - Gm24105 misc_RNA misc_RNA MGP_WSBEiJ_T0001734.1 MGP_WSBEiJ_G0001656.1 mouse_genomes_project 5 117294276 117296177 - TEC TEC MGP_WSBEiJ_T0004781.1 MGP_WSBEiJ_G0004113.1 mouse_genomes_project 5 139579924 139580629 - Gm43604 antisense antisense MGP_WSBEiJ_T0071325.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90533070 90677619 - MGP_WSBEiJ_P0071325 Ankrd17 protein_coding protein_coding MGP_WSBEiJ_T0071326.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90533723 90539831 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0071327.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90534201 90677606 - MGP_WSBEiJ_P0071327 Ankrd17 protein_coding protein_coding MGP_WSBEiJ_T0071328.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90534369 90677313 - MGP_WSBEiJ_P0071328 Ankrd17 protein_coding protein_coding MGP_WSBEiJ_T0071329.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90534645 90650596 - MGP_WSBEiJ_P0071329 Ankrd17 protein_coding protein_coding MGP_WSBEiJ_T0071330.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90543766 90547041 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0071331.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90560021 90610637 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0071332.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90560665 90569765 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0071333.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90566449 90572976 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0071334.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90573510 90581607 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0071335.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90582435 90584612 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0071336.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90598324 90601164 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0071337.1 MGP_WSBEiJ_G0028907.1 mouse_genomes_project 5 90675375 90677270 - Ankrd17 protein_coding retained_intron MGP_WSBEiJ_T0100860.1 MGP_WSBEiJ_G0039318.1 mouse_genomes_project 5 87452615 87456380 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0071351.1 MGP_WSBEiJ_G0028913.1 mouse_genomes_project 5 90919655 90957418 - MGP_WSBEiJ_P0071351 Rassf6 protein_coding protein_coding MGP_WSBEiJ_T0071352.1 MGP_WSBEiJ_G0028913.1 mouse_genomes_project 5 90919655 90957418 - MGP_WSBEiJ_P0071352 Rassf6 protein_coding protein_coding MGP_WSBEiJ_T0071353.1 MGP_WSBEiJ_G0028913.1 mouse_genomes_project 5 90920203 90926417 - MGP_WSBEiJ_P0071353 Rassf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071354.1 MGP_WSBEiJ_G0028913.1 mouse_genomes_project 5 90920411 90957588 - MGP_WSBEiJ_P0071354 Rassf6 protein_coding protein_coding MGP_WSBEiJ_T0071355.1 MGP_WSBEiJ_G0028913.1 mouse_genomes_project 5 90934167 90957559 - MGP_WSBEiJ_P0071355 Rassf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071356.1 MGP_WSBEiJ_G0028913.1 mouse_genomes_project 5 90938705 90957458 - MGP_WSBEiJ_P0071356 Rassf6 protein_coding protein_coding MGP_WSBEiJ_T0071357.1 MGP_WSBEiJ_G0028913.1 mouse_genomes_project 5 90955402 90957586 - Rassf6 protein_coding processed_transcript MGP_WSBEiJ_T0071560.1 MGP_WSBEiJ_G0028963.1 mouse_genomes_project 5 99179438 99180488 + MGP_WSBEiJ_P0071560 Gm11111 protein_coding protein_coding MGP_WSBEiJ_T0014624.1 MGP_WSBEiJ_G0012754.1 mouse_genomes_project 5 89743890 89744716 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001643.1 MGP_WSBEiJ_G0001565.1 mouse_genomes_project 5 72393687 72397057 - TEC TEC MGP_WSBEiJ_T0074541.1 MGP_WSBEiJ_G0029525.1 mouse_genomes_project 5 148647542 148659819 + MGP_WSBEiJ_P0074541 Nptx2 protein_coding protein_coding MGP_WSBEiJ_T0069549.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28690566 28699663 - MGP_WSBEiJ_P0069549 Preb protein_coding protein_coding MGP_WSBEiJ_T0069550.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28693902 28698299 - MGP_WSBEiJ_P0069550 Preb protein_coding protein_coding MGP_WSBEiJ_T0069551.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28694271 28697645 - Preb protein_coding processed_transcript MGP_WSBEiJ_T0069552.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28694397 28695088 - Preb protein_coding retained_intron MGP_WSBEiJ_T0069553.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28694836 28698222 - Preb protein_coding retained_intron MGP_WSBEiJ_T0069554.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28697533 28698220 - Preb protein_coding retained_intron MGP_WSBEiJ_T0069555.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28697681 28698784 - Preb protein_coding retained_intron MGP_WSBEiJ_T0069556.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28698268 28699828 - Preb protein_coding processed_transcript MGP_WSBEiJ_T0069557.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28698438 28699113 - Preb protein_coding processed_transcript MGP_WSBEiJ_T0069558.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28698496 28699810 - Preb protein_coding retained_intron MGP_WSBEiJ_T0069559.1 MGP_WSBEiJ_G0028592.1 mouse_genomes_project 5 28698918 28699820 - Preb protein_coding processed_transcript MGP_WSBEiJ_T0014511.1 MGP_WSBEiJ_G0012641.1 mouse_genomes_project 5 33927781 33928077 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074683.1 MGP_WSBEiJ_G0029558.1 mouse_genomes_project 5 151360089 151422118 - MGP_WSBEiJ_P0074683 Lnx2 protein_coding protein_coding MGP_WSBEiJ_T0074684.1 MGP_WSBEiJ_G0029558.1 mouse_genomes_project 5 151361700 151362472 - Lnx2 protein_coding processed_transcript MGP_WSBEiJ_T0072161.1 MGP_WSBEiJ_G0029085.1 mouse_genomes_project 5 113899451 113902038 - Srrd protein_coding processed_transcript MGP_WSBEiJ_T0072162.1 MGP_WSBEiJ_G0029085.1 mouse_genomes_project 5 113899451 113905036 - MGP_WSBEiJ_P0072162 Srrd protein_coding protein_coding MGP_WSBEiJ_T0072163.1 MGP_WSBEiJ_G0029085.1 mouse_genomes_project 5 113899451 113905056 - MGP_WSBEiJ_P0072163 Srrd protein_coding protein_coding MGP_WSBEiJ_T0072164.1 MGP_WSBEiJ_G0029085.1 mouse_genomes_project 5 113899462 113905069 - MGP_WSBEiJ_P0072164 Srrd protein_coding unknown_likely_coding MGP_WSBEiJ_T0072165.1 MGP_WSBEiJ_G0029085.1 mouse_genomes_project 5 113899968 113901948 - Srrd protein_coding retained_intron MGP_WSBEiJ_T0072166.1 MGP_WSBEiJ_G0029085.1 mouse_genomes_project 5 113900031 113905034 - Srrd protein_coding processed_transcript MGP_WSBEiJ_T0072167.1 MGP_WSBEiJ_G0029085.1 mouse_genomes_project 5 113901734 113902235 - Srrd protein_coding processed_transcript MGP_WSBEiJ_T0069603.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28894504 28912740 - MGP_WSBEiJ_P0069603 Mpv17 protein_coding protein_coding MGP_WSBEiJ_T0069604.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28894513 28912711 - MGP_WSBEiJ_P0069604 Mpv17 protein_coding protein_coding MGP_WSBEiJ_T0069605.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28894946 28912687 - MGP_WSBEiJ_P0069605 Mpv17 protein_coding protein_coding MGP_WSBEiJ_T0069606.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28895308 28912717 - MGP_WSBEiJ_P0069606 Mpv17 protein_coding protein_coding MGP_WSBEiJ_T0069607.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28895366 28912641 - MGP_WSBEiJ_P0069607 Mpv17 protein_coding protein_coding MGP_WSBEiJ_T0069608.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28895391 28912681 - MGP_WSBEiJ_P0069608 Mpv17 protein_coding protein_coding MGP_WSBEiJ_T0069609.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28895459 28901540 - MGP_WSBEiJ_P0069609 Mpv17 protein_coding protein_coding MGP_WSBEiJ_T0069610.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28895561 28901560 - Mpv17 protein_coding retained_intron MGP_WSBEiJ_T0069611.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28899573 28912707 - Mpv17 protein_coding retained_intron MGP_WSBEiJ_T0069612.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28899773 28912710 - MGP_WSBEiJ_P0069612 Mpv17 protein_coding protein_coding MGP_WSBEiJ_T0069614.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28900539 28912707 - Mpv17 protein_coding retained_intron MGP_WSBEiJ_T0069615.1 MGP_WSBEiJ_G0028601.1 mouse_genomes_project 5 28900775 28912231 - Mpv17 protein_coding retained_intron MGP_WSBEiJ_T0010558.1 MGP_WSBEiJ_G0008715.1 mouse_genomes_project 5 141756273 141756357 - Mir25 miRNA miRNA MGP_WSBEiJ_T0001725.1 MGP_WSBEiJ_G0001647.1 mouse_genomes_project 5 114789782 114790695 - TEC TEC MGP_WSBEiJ_T0008261.1 MGP_WSBEiJ_G0006711.1 mouse_genomes_project 5 131413441 131414938 - 4930573I07Rik lincRNA lincRNA MGP_WSBEiJ_T0008262.1 MGP_WSBEiJ_G0006711.1 mouse_genomes_project 5 131413443 131414961 - 4930573I07Rik lincRNA lincRNA MGP_WSBEiJ_T0073130.1 MGP_WSBEiJ_G0029260.1 mouse_genomes_project 5 126630455 126641383 + MGP_WSBEiJ_P0073130 Gm43518 protein_coding protein_coding MGP_WSBEiJ_T0070597.1 MGP_WSBEiJ_G0028761.1 mouse_genomes_project 5 64270740 64335984 + MGP_WSBEiJ_P0070597 Wdr19 protein_coding protein_coding MGP_WSBEiJ_T0070598.1 MGP_WSBEiJ_G0028761.1 mouse_genomes_project 5 64270742 64335993 + MGP_WSBEiJ_P0070598 Wdr19 protein_coding protein_coding MGP_WSBEiJ_T0070599.1 MGP_WSBEiJ_G0028761.1 mouse_genomes_project 5 64270744 64276363 + Wdr19 protein_coding retained_intron MGP_WSBEiJ_T0070600.1 MGP_WSBEiJ_G0028761.1 mouse_genomes_project 5 64270761 64318209 + Wdr19 protein_coding retained_intron MGP_WSBEiJ_T0070601.1 MGP_WSBEiJ_G0028761.1 mouse_genomes_project 5 64270775 64304038 + Wdr19 protein_coding retained_intron MGP_WSBEiJ_T0070602.1 MGP_WSBEiJ_G0028761.1 mouse_genomes_project 5 64270784 64296818 + Wdr19 protein_coding retained_intron MGP_WSBEiJ_T0070603.1 MGP_WSBEiJ_G0028761.1 mouse_genomes_project 5 64273663 64335988 + Wdr19 protein_coding retained_intron MGP_WSBEiJ_T0070604.1 MGP_WSBEiJ_G0028761.1 mouse_genomes_project 5 64332002 64335987 + MGP_WSBEiJ_P0070604 Wdr19 protein_coding protein_coding MGP_WSBEiJ_T0072687.1 MGP_WSBEiJ_G0029187.1 mouse_genomes_project 5 122847170 122867029 - MGP_WSBEiJ_P0072687 Rita1 protein_coding protein_coding MGP_WSBEiJ_T0072688.1 MGP_WSBEiJ_G0029187.1 mouse_genomes_project 5 122856942 122866327 - MGP_WSBEiJ_P0072688 Rita1 protein_coding protein_coding MGP_WSBEiJ_T0072689.1 MGP_WSBEiJ_G0029187.1 mouse_genomes_project 5 122856943 122860611 - Rita1 protein_coding processed_transcript MGP_WSBEiJ_T0072690.1 MGP_WSBEiJ_G0029187.1 mouse_genomes_project 5 122861927 122867279 - Rita1 protein_coding processed_transcript MGP_WSBEiJ_T0072691.1 MGP_WSBEiJ_G0029187.1 mouse_genomes_project 5 122863946 122867279 - MGP_WSBEiJ_P0072691 Rita1 protein_coding protein_coding MGP_WSBEiJ_T0072692.1 MGP_WSBEiJ_G0029187.1 mouse_genomes_project 5 122863946 122867279 - MGP_WSBEiJ_P0072692 Rita1 protein_coding protein_coding MGP_WSBEiJ_T0072693.1 MGP_WSBEiJ_G0029187.1 mouse_genomes_project 5 122864799 122867260 - MGP_WSBEiJ_P0072693 Rita1 protein_coding protein_coding MGP_WSBEiJ_T0071252.1 MGP_WSBEiJ_G0028880.1 mouse_genomes_project 5 87921240 87937526 + MGP_WSBEiJ_P0071252 Csn1s2b protein_coding protein_coding MGP_WSBEiJ_T0071253.1 MGP_WSBEiJ_G0028880.1 mouse_genomes_project 5 87921281 87937517 + MGP_WSBEiJ_P0071253 Csn1s2b protein_coding protein_coding MGP_WSBEiJ_T0071254.1 MGP_WSBEiJ_G0028880.1 mouse_genomes_project 5 87921282 87931617 + MGP_WSBEiJ_P0071254 Csn1s2b protein_coding protein_coding MGP_WSBEiJ_T0071255.1 MGP_WSBEiJ_G0028880.1 mouse_genomes_project 5 87921285 87937421 + MGP_WSBEiJ_P0071255 Csn1s2b protein_coding protein_coding MGP_WSBEiJ_T0071256.1 MGP_WSBEiJ_G0028880.1 mouse_genomes_project 5 87924494 87926557 + Csn1s2b protein_coding retained_intron MGP_WSBEiJ_T0014728.1 MGP_WSBEiJ_G0012858.1 mouse_genomes_project 5 141952227 141952431 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074325.1 MGP_WSBEiJ_G0029478.1 mouse_genomes_project 5 144472789 144481059 + MGP_WSBEiJ_P0074325 Lfng protein_coding protein_coding MGP_WSBEiJ_T0074326.1 MGP_WSBEiJ_G0029478.1 mouse_genomes_project 5 144477021 144478844 + Lfng protein_coding processed_transcript MGP_WSBEiJ_T0074327.1 MGP_WSBEiJ_G0029478.1 mouse_genomes_project 5 144477197 144480186 + Lfng protein_coding retained_intron MGP_WSBEiJ_T0073365.1 MGP_WSBEiJ_G0029300.1 mouse_genomes_project 5 131959028 131962083 + MGP_WSBEiJ_P0073365 protein_coding unknown_likely_coding MGP_WSBEiJ_T0073366.1 MGP_WSBEiJ_G0029300.1 mouse_genomes_project 5 131959114 131959706 + protein_coding processed_transcript MGP_WSBEiJ_T0001766.1 MGP_WSBEiJ_G0001688.1 mouse_genomes_project 5 124938337 124938638 + TEC TEC MGP_WSBEiJ_T0072637.1 MGP_WSBEiJ_G0029175.1 mouse_genomes_project 5 120328633 120353206 + MGP_WSBEiJ_P0072637 2410131K14Rik protein_coding protein_coding MGP_WSBEiJ_T0014680.1 MGP_WSBEiJ_G0012810.1 mouse_genomes_project 5 112349827 112350498 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007912.1 MGP_WSBEiJ_G0006469.1 mouse_genomes_project 5 4642461 4895307 - lincRNA lincRNA MGP_WSBEiJ_T0001596.1 MGP_WSBEiJ_G0001519.1 mouse_genomes_project 5 64730139 64734205 + TEC TEC MGP_WSBEiJ_T0001629.1 MGP_WSBEiJ_G0001552.1 mouse_genomes_project 5 68194815 68198612 - TEC TEC MGP_WSBEiJ_T0001737.1 MGP_WSBEiJ_G0001659.1 mouse_genomes_project 5 117826264 117828128 + TEC TEC MGP_WSBEiJ_T0004784.1 MGP_WSBEiJ_G0004116.1 mouse_genomes_project 5 141188223 141190629 + Gm36266 antisense antisense MGP_WSBEiJ_T0017578.1 MGP_WSBEiJ_G0015028.1 mouse_genomes_project 5 107616953 107756333 - Gm28039 processed_transcript processed_transcript MGP_WSBEiJ_T0008014.1 MGP_WSBEiJ_G0006540.1 mouse_genomes_project 5 63398390 63403066 + Gm43838 lincRNA lincRNA MGP_WSBEiJ_T0074634.1 MGP_WSBEiJ_G0029544.1 mouse_genomes_project 5 150072906 150097199 - MGP_WSBEiJ_P0074634 Cyp3a11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0014678.1 MGP_WSBEiJ_G0012808.1 mouse_genomes_project 5 111929893 111931340 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017549.1 MGP_WSBEiJ_G0015018.1 mouse_genomes_project 5 50571245 50575097 + 9230114K14Rik processed_transcript lincRNA MGP_WSBEiJ_T0017550.1 MGP_WSBEiJ_G0015018.1 mouse_genomes_project 5 50571252 50667187 + 9230114K14Rik processed_transcript lincRNA MGP_WSBEiJ_T0017551.1 MGP_WSBEiJ_G0015018.1 mouse_genomes_project 5 50571252 50578574 + 9230114K14Rik processed_transcript retained_intron MGP_WSBEiJ_T0017552.1 MGP_WSBEiJ_G0015018.1 mouse_genomes_project 5 50571286 50632386 + 9230114K14Rik processed_transcript lincRNA MGP_WSBEiJ_T0001467.1 MGP_WSBEiJ_G0001392.1 mouse_genomes_project 5 32434606 32438135 + TEC TEC MGP_WSBEiJ_T0008235.1 MGP_WSBEiJ_G0006695.1 mouse_genomes_project 5 128123590 128135188 + Gm42485 lincRNA lincRNA MGP_WSBEiJ_T0001726.1 MGP_WSBEiJ_G0001648.1 mouse_genomes_project 5 114961907 114963107 - TEC TEC MGP_WSBEiJ_T0069481.1 MGP_WSBEiJ_G0028580.1 mouse_genomes_project 5 28218451 28282050 - MGP_WSBEiJ_P0069481 Cib4 protein_coding protein_coding MGP_WSBEiJ_T0008003.1 MGP_WSBEiJ_G0006530.1 mouse_genomes_project 5 50731923 50732198 - Gm43179 lincRNA lincRNA MGP_WSBEiJ_T0008344.1 MGP_WSBEiJ_G0006771.1 mouse_genomes_project 5 155199860 155200126 - Gm43690 lincRNA lincRNA MGP_WSBEiJ_T0097070.1 MGP_WSBEiJ_G0035751.1 mouse_genomes_project 5 108494716 108494835 + n-R5s173 rRNA rRNA MGP_WSBEiJ_T0070261.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36435682 36571209 - MGP_WSBEiJ_P0070261 Slc2a9 protein_coding protein_coding MGP_WSBEiJ_T0070262.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36435682 36568130 - MGP_WSBEiJ_P0070262 Slc2a9 protein_coding protein_coding MGP_WSBEiJ_T0070263.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36435683 36580032 - MGP_WSBEiJ_P0070263 Slc2a9 protein_coding protein_coding MGP_WSBEiJ_T0070264.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36435715 36592912 - MGP_WSBEiJ_P0070264 Slc2a9 protein_coding protein_coding MGP_WSBEiJ_T0070265.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36436047 36595271 - MGP_WSBEiJ_P0070265 Slc2a9 protein_coding protein_coding MGP_WSBEiJ_T0070266.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36436047 36567982 - MGP_WSBEiJ_P0070266 Slc2a9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070267.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36437491 36567955 - MGP_WSBEiJ_P0070267 Slc2a9 protein_coding protein_coding MGP_WSBEiJ_T0070268.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36470455 36568006 - MGP_WSBEiJ_P0070268 Slc2a9 protein_coding protein_coding MGP_WSBEiJ_T0070269.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36505369 36531456 - Slc2a9 protein_coding processed_transcript MGP_WSBEiJ_T0070270.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36531276 36592835 - MGP_WSBEiJ_P0070270 Slc2a9 protein_coding protein_coding MGP_WSBEiJ_T0070271.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36563558 36592921 - Slc2a9 protein_coding processed_transcript MGP_WSBEiJ_T0070272.1 MGP_WSBEiJ_G0028701.1 mouse_genomes_project 5 36570815 36580005 - Slc2a9 protein_coding retained_intron MGP_WSBEiJ_T0098350.1 MGP_WSBEiJ_G0037013.1 mouse_genomes_project 5 69786447 69786554 - Gm26072 snRNA snRNA MGP_WSBEiJ_T0014761.1 MGP_WSBEiJ_G0012891.1 mouse_genomes_project 5 151803879 151804339 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004566.1 MGP_WSBEiJ_G0003954.1 mouse_genomes_project 5 21873097 21876386 + Gm15589 antisense antisense MGP_WSBEiJ_T0001538.1 MGP_WSBEiJ_G0001462.1 mouse_genomes_project 5 47567714 47570196 - TEC TEC MGP_WSBEiJ_T0100880.1 MGP_WSBEiJ_G0039338.1 mouse_genomes_project 5 156302166 156307492 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010530.1 MGP_WSBEiJ_G0008687.1 mouse_genomes_project 5 107948065 107948164 - Gm27527 miRNA miRNA MGP_WSBEiJ_T0014508.1 MGP_WSBEiJ_G0012638.1 mouse_genomes_project 5 32256977 32257436 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008354.1 MGP_WSBEiJ_G0006778.1 mouse_genomes_project 5 156334829 156342010 + Gm43129 lincRNA lincRNA MGP_WSBEiJ_T0069595.1 MGP_WSBEiJ_G0028598.1 mouse_genomes_project 5 28858630 28864308 + MGP_WSBEiJ_P0069595 Dnajc5g protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069596.1 MGP_WSBEiJ_G0028598.1 mouse_genomes_project 5 28860630 28864063 + MGP_WSBEiJ_P0069596 Dnajc5g protein_coding protein_coding MGP_WSBEiJ_T0069597.1 MGP_WSBEiJ_G0028598.1 mouse_genomes_project 5 28860640 28864167 + MGP_WSBEiJ_P0069597 Dnajc5g protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069598.1 MGP_WSBEiJ_G0028598.1 mouse_genomes_project 5 28860642 28864850 + MGP_WSBEiJ_P0069598 Dnajc5g protein_coding protein_coding MGP_WSBEiJ_T0073429.1 MGP_WSBEiJ_G0029312.1 mouse_genomes_project 5 132928711 132931453 + MGP_WSBEiJ_P0073429 Nupr1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073430.1 MGP_WSBEiJ_G0029312.1 mouse_genomes_project 5 132928713 132933962 + MGP_WSBEiJ_P0073430 Nupr1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073431.1 MGP_WSBEiJ_G0029312.1 mouse_genomes_project 5 132928739 132930566 + MGP_WSBEiJ_P0073431 Nupr1l protein_coding protein_coding MGP_WSBEiJ_T0073432.1 MGP_WSBEiJ_G0029312.1 mouse_genomes_project 5 132931141 132931453 + Nupr1l protein_coding processed_transcript MGP_WSBEiJ_T0096831.1 MGP_WSBEiJ_G0035512.1 mouse_genomes_project 5 124359850 124360266 - pseudogene pseudogene MGP_WSBEiJ_T0098330.1 MGP_WSBEiJ_G0036993.1 mouse_genomes_project 5 21983581 21983682 - Gm22333 snRNA snRNA MGP_WSBEiJ_T0004619.1 MGP_WSBEiJ_G0003996.1 mouse_genomes_project 5 62941972 62943021 + Gm15819 antisense antisense MGP_WSBEiJ_T0074638.1 MGP_WSBEiJ_G0029547.1 mouse_genomes_project 5 150336344 150388770 + protein_coding processed_transcript MGP_WSBEiJ_T0004569.1 MGP_WSBEiJ_G0003956.1 mouse_genomes_project 5 22273376 22281165 - Gm26648 antisense antisense MGP_WSBEiJ_T0014530.1 MGP_WSBEiJ_G0012660.1 mouse_genomes_project 5 47778060 47778373 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097408.1 MGP_WSBEiJ_G0036082.1 mouse_genomes_project 5 28093000 28093445 + Gm43755 sense_intronic sense_intronic MGP_WSBEiJ_T0074789.1 MGP_WSBEiJ_G0029578.1 mouse_genomes_project 5 153973924 154011940 + MGP_WSBEiJ_P0074789 Tex26 protein_coding protein_coding MGP_WSBEiJ_T0074790.1 MGP_WSBEiJ_G0029578.1 mouse_genomes_project 5 153973946 153975267 + Tex26 protein_coding processed_transcript MGP_WSBEiJ_T0074791.1 MGP_WSBEiJ_G0029578.1 mouse_genomes_project 5 153973970 154011940 + MGP_WSBEiJ_P0074791 Tex26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074792.1 MGP_WSBEiJ_G0029578.1 mouse_genomes_project 5 153973979 154011852 + MGP_WSBEiJ_P0074792 Tex26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074793.1 MGP_WSBEiJ_G0029578.1 mouse_genomes_project 5 153973983 154011852 + MGP_WSBEiJ_P0074793 Tex26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074794.1 MGP_WSBEiJ_G0029578.1 mouse_genomes_project 5 153973991 154012046 + MGP_WSBEiJ_P0074794 Tex26 protein_coding protein_coding MGP_WSBEiJ_T0001854.1 MGP_WSBEiJ_G0001774.1 mouse_genomes_project 5 147354914 147355940 + TEC TEC MGP_WSBEiJ_T0004567.1 MGP_WSBEiJ_G0003955.1 mouse_genomes_project 5 21905371 21922658 - Gm15587 antisense antisense MGP_WSBEiJ_T0004568.1 MGP_WSBEiJ_G0003955.1 mouse_genomes_project 5 21908370 21922690 - Gm15587 antisense antisense MGP_WSBEiJ_T0008159.1 MGP_WSBEiJ_G0006645.1 mouse_genomes_project 5 113480127 113486276 - Gm42488 lincRNA lincRNA MGP_WSBEiJ_T0008290.1 MGP_WSBEiJ_G0006730.1 mouse_genomes_project 5 143281051 143302202 + 4930500L23Rik lincRNA lincRNA MGP_WSBEiJ_T0073058.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126172440 126184816 - MGP_WSBEiJ_P0073058 Diablo protein_coding protein_coding MGP_WSBEiJ_T0073059.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126172516 126184838 - MGP_WSBEiJ_P0073059 Diablo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073060.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126172815 126186125 - MGP_WSBEiJ_P0073060 Diablo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073061.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126176543 126184832 - MGP_WSBEiJ_P0073061 Diablo protein_coding protein_coding MGP_WSBEiJ_T0073062.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126176998 126184829 - MGP_WSBEiJ_P0073062 Diablo protein_coding protein_coding MGP_WSBEiJ_T0073063.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126178321 126184829 - MGP_WSBEiJ_P0073063 Diablo protein_coding protein_coding MGP_WSBEiJ_T0073064.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126178672 126184191 - Diablo protein_coding retained_intron MGP_WSBEiJ_T0073065.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126178773 126181490 - Diablo protein_coding retained_intron MGP_WSBEiJ_T0073066.1 MGP_WSBEiJ_G0029251.1 mouse_genomes_project 5 126185193 126186184 - Diablo protein_coding processed_transcript MGP_WSBEiJ_T0069317.1 MGP_WSBEiJ_G0028544.1 mouse_genomes_project 5 22332974 22333290 - Crygn protein_coding processed_transcript MGP_WSBEiJ_T0069318.1 MGP_WSBEiJ_G0028544.1 mouse_genomes_project 5 22332974 22340012 - MGP_WSBEiJ_P0069318 Crygn protein_coding protein_coding MGP_WSBEiJ_T0100856.1 MGP_WSBEiJ_G0039314.1 mouse_genomes_project 5 86983939 87005152 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0070466.1 MGP_WSBEiJ_G0028733.1 mouse_genomes_project 5 50754412 50763053 + MGP_WSBEiJ_P0070466 Sod3 protein_coding protein_coding MGP_WSBEiJ_T0072606.1 MGP_WSBEiJ_G0029169.1 mouse_genomes_project 5 119826416 119919115 + MGP_WSBEiJ_P0072606 Nos1 protein_coding protein_coding MGP_WSBEiJ_T0072607.1 MGP_WSBEiJ_G0029169.1 mouse_genomes_project 5 119826439 119918745 + Nos1 protein_coding processed_transcript MGP_WSBEiJ_T0072608.1 MGP_WSBEiJ_G0029169.1 mouse_genomes_project 5 119890734 120021055 + MGP_WSBEiJ_P0072608 Nos1 protein_coding protein_coding MGP_WSBEiJ_T0072609.1 MGP_WSBEiJ_G0029169.1 mouse_genomes_project 5 119891070 120016638 + MGP_WSBEiJ_P0072609 Nos1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072610.1 MGP_WSBEiJ_G0029169.1 mouse_genomes_project 5 119918772 120016184 + MGP_WSBEiJ_P0072610 Nos1 protein_coding protein_coding MGP_WSBEiJ_T0072611.1 MGP_WSBEiJ_G0029169.1 mouse_genomes_project 5 119918777 120016088 + MGP_WSBEiJ_P0072611 Nos1 protein_coding protein_coding MGP_WSBEiJ_T0072612.1 MGP_WSBEiJ_G0029169.1 mouse_genomes_project 5 119975868 119982179 + Nos1 protein_coding processed_transcript MGP_WSBEiJ_T0071361.1 MGP_WSBEiJ_G0028916.1 mouse_genomes_project 5 91099374 91100323 + MGP_WSBEiJ_P0071361 Pf4 protein_coding protein_coding MGP_WSBEiJ_T0071362.1 MGP_WSBEiJ_G0028916.1 mouse_genomes_project 5 91099452 91100096 + MGP_WSBEiJ_P0071362 Pf4 protein_coding protein_coding MGP_WSBEiJ_T0071363.1 MGP_WSBEiJ_G0028916.1 mouse_genomes_project 5 91099830 91100318 + Pf4 protein_coding retained_intron MGP_WSBEiJ_T0001843.1 MGP_WSBEiJ_G0001763.1 mouse_genomes_project 5 139826499 139830843 - TEC TEC MGP_WSBEiJ_T0008207.1 MGP_WSBEiJ_G0006678.1 mouse_genomes_project 5 121803875 121814249 + Gm16063 lincRNA lincRNA MGP_WSBEiJ_T0001698.1 MGP_WSBEiJ_G0001620.1 mouse_genomes_project 5 104929775 104932551 - TEC TEC MGP_WSBEiJ_T0070919.1 MGP_WSBEiJ_G0028812.1 mouse_genomes_project 5 72692942 72709543 - MGP_WSBEiJ_P0070919 Ociad2 protein_coding protein_coding MGP_WSBEiJ_T0070920.1 MGP_WSBEiJ_G0028812.1 mouse_genomes_project 5 72692944 72709457 - MGP_WSBEiJ_P0070920 Ociad2 protein_coding protein_coding MGP_WSBEiJ_T0070921.1 MGP_WSBEiJ_G0028812.1 mouse_genomes_project 5 72692944 72709454 - MGP_WSBEiJ_P0070921 Ociad2 protein_coding protein_coding MGP_WSBEiJ_T0070922.1 MGP_WSBEiJ_G0028812.1 mouse_genomes_project 5 72694077 72709064 - MGP_WSBEiJ_P0070922 Ociad2 protein_coding protein_coding MGP_WSBEiJ_T0070923.1 MGP_WSBEiJ_G0028812.1 mouse_genomes_project 5 72698406 72712021 - MGP_WSBEiJ_P0070923 Ociad2 protein_coding protein_coding MGP_WSBEiJ_T0001552.1 MGP_WSBEiJ_G0001476.1 mouse_genomes_project 5 50458727 50461172 - TEC TEC MGP_WSBEiJ_T0073071.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126241687 126369692 - MGP_WSBEiJ_P0073071 Clip1 protein_coding protein_coding MGP_WSBEiJ_T0073072.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126241687 126369988 - MGP_WSBEiJ_P0073072 Clip1 protein_coding protein_coding MGP_WSBEiJ_T0073073.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126241699 126316586 - MGP_WSBEiJ_P0073073 Clip1 protein_coding protein_coding MGP_WSBEiJ_T0073074.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126241699 126369645 - MGP_WSBEiJ_P0073074 Clip1 protein_coding protein_coding MGP_WSBEiJ_T0073075.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126241710 126268827 - Clip1 protein_coding retained_intron MGP_WSBEiJ_T0073076.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126241759 126242446 - Clip1 protein_coding processed_transcript MGP_WSBEiJ_T0073077.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126242721 126369695 - MGP_WSBEiJ_P0073077 Clip1 protein_coding protein_coding MGP_WSBEiJ_T0073078.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126242962 126277585 - Clip1 protein_coding retained_intron MGP_WSBEiJ_T0073079.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126243132 126324458 - MGP_WSBEiJ_P0073079 Clip1 protein_coding protein_coding MGP_WSBEiJ_T0073080.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126243339 126283235 - MGP_WSBEiJ_P0073080 Clip1 protein_coding protein_coding MGP_WSBEiJ_T0073081.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126250083 126282876 - Clip1 protein_coding retained_intron MGP_WSBEiJ_T0073082.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126253977 126268736 - Clip1 protein_coding retained_intron MGP_WSBEiJ_T0073083.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126283069 126324348 - MGP_WSBEiJ_P0073083 Clip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073084.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126283118 126337369 - MGP_WSBEiJ_P0073084 Clip1 protein_coding protein_coding MGP_WSBEiJ_T0073085.1 MGP_WSBEiJ_G0029253.1 mouse_genomes_project 5 126301012 126303702 - Clip1 protein_coding retained_intron MGP_WSBEiJ_T0072233.1 MGP_WSBEiJ_G0029099.1 mouse_genomes_project 5 115273144 115315039 - MGP_WSBEiJ_P0072233 Cmklr1 protein_coding protein_coding MGP_WSBEiJ_T0072234.1 MGP_WSBEiJ_G0029099.1 mouse_genomes_project 5 115276559 115292256 - MGP_WSBEiJ_P0072234 Cmklr1 protein_coding protein_coding MGP_WSBEiJ_T0072235.1 MGP_WSBEiJ_G0029099.1 mouse_genomes_project 5 115277450 115308229 - MGP_WSBEiJ_P0072235 Cmklr1 protein_coding protein_coding MGP_WSBEiJ_T0072236.1 MGP_WSBEiJ_G0029099.1 mouse_genomes_project 5 115295956 115315009 - Cmklr1 protein_coding processed_transcript MGP_WSBEiJ_T0071201.1 MGP_WSBEiJ_G0028866.1 mouse_genomes_project 5 87015245 87028715 + MGP_WSBEiJ_P0071201 Ugt2b35 protein_coding protein_coding MGP_WSBEiJ_T0074637.1 MGP_WSBEiJ_G0029546.1 mouse_genomes_project 5 150209475 150220872 - MGP_WSBEiJ_P0074637 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0008026.1 MGP_WSBEiJ_G0006549.1 mouse_genomes_project 5 66592897 66598114 + Gm43698 lincRNA lincRNA MGP_WSBEiJ_T0008027.1 MGP_WSBEiJ_G0006549.1 mouse_genomes_project 5 66597841 66598933 + Gm43698 lincRNA lincRNA MGP_WSBEiJ_T0070208.1 MGP_WSBEiJ_G0028690.1 mouse_genomes_project 5 35403591 35496838 + MGP_WSBEiJ_P0070208 Evc2 protein_coding protein_coding MGP_WSBEiJ_T0070209.1 MGP_WSBEiJ_G0028690.1 mouse_genomes_project 5 35403700 35455582 + Evc2 protein_coding retained_intron MGP_WSBEiJ_T0070210.1 MGP_WSBEiJ_G0028690.1 mouse_genomes_project 5 35457728 35459840 + Evc2 protein_coding processed_transcript MGP_WSBEiJ_T0070211.1 MGP_WSBEiJ_G0028690.1 mouse_genomes_project 5 35487662 35489718 + Evc2 protein_coding retained_intron MGP_WSBEiJ_T0073948.1 MGP_WSBEiJ_G0029401.1 mouse_genomes_project 5 140854706 140878419 - MGP_WSBEiJ_P0073948 Slc12a9 protein_coding protein_coding MGP_WSBEiJ_T0073949.1 MGP_WSBEiJ_G0029401.1 mouse_genomes_project 5 140863072 140865694 - Slc12a9 protein_coding retained_intron MGP_WSBEiJ_T0073950.1 MGP_WSBEiJ_G0029401.1 mouse_genomes_project 5 140874590 140878419 - Slc12a9 protein_coding retained_intron MGP_WSBEiJ_T0073951.1 MGP_WSBEiJ_G0029401.1 mouse_genomes_project 5 140877081 140877833 - MGP_WSBEiJ_P0073951 Slc12a9 protein_coding protein_coding MGP_WSBEiJ_T0010570.1 MGP_WSBEiJ_G0008727.1 mouse_genomes_project 5 153779366 153779444 - miRNA miRNA MGP_WSBEiJ_T0068772.1 MGP_WSBEiJ_G0028451.1 mouse_genomes_project 5 411402 429086 + MGP_WSBEiJ_P0068772 1700109H08Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068773.1 MGP_WSBEiJ_G0028451.1 mouse_genomes_project 5 411509 429101 + MGP_WSBEiJ_P0068773 1700109H08Rik protein_coding protein_coding MGP_WSBEiJ_T0068774.1 MGP_WSBEiJ_G0028451.1 mouse_genomes_project 5 415523 429101 + MGP_WSBEiJ_P0068774 1700109H08Rik protein_coding protein_coding MGP_WSBEiJ_T0068775.1 MGP_WSBEiJ_G0028451.1 mouse_genomes_project 5 422973 425200 + 1700109H08Rik protein_coding retained_intron MGP_WSBEiJ_T0068776.1 MGP_WSBEiJ_G0028451.1 mouse_genomes_project 5 425248 429089 + MGP_WSBEiJ_P0068776 1700109H08Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099598.1 MGP_WSBEiJ_G0038261.1 mouse_genomes_project 5 64901500 64901694 + Gm24346 snoRNA snoRNA MGP_WSBEiJ_T0004714.1 MGP_WSBEiJ_G0004065.1 mouse_genomes_project 5 118064264 118069766 + C330018A13Rik antisense antisense MGP_WSBEiJ_T0001429.1 MGP_WSBEiJ_G0001357.1 mouse_genomes_project 5 18044695 18045194 + TEC TEC MGP_WSBEiJ_T0010526.1 MGP_WSBEiJ_G0008683.1 mouse_genomes_project 5 93200551 93200663 - Mir1961 miRNA miRNA MGP_WSBEiJ_T0100881.1 MGP_WSBEiJ_G0039339.1 mouse_genomes_project 5 156327183 156327271 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014423.1 MGP_WSBEiJ_G0012553.1 mouse_genomes_project 5 6328125 6328367 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072307.1 MGP_WSBEiJ_G0029114.1 mouse_genomes_project 5 115986706 116006365 - MGP_WSBEiJ_P0072307 Foxn4 protein_coding protein_coding MGP_WSBEiJ_T0072308.1 MGP_WSBEiJ_G0029114.1 mouse_genomes_project 5 115988127 115995682 - MGP_WSBEiJ_P0072308 Foxn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072309.1 MGP_WSBEiJ_G0029114.1 mouse_genomes_project 5 115992904 116006260 - MGP_WSBEiJ_P0072309 Foxn4 protein_coding protein_coding MGP_WSBEiJ_T0072310.1 MGP_WSBEiJ_G0029114.1 mouse_genomes_project 5 115995267 116006307 - Foxn4 protein_coding retained_intron MGP_WSBEiJ_T0014667.1 MGP_WSBEiJ_G0012797.1 mouse_genomes_project 5 109354739 109355215 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014602.1 MGP_WSBEiJ_G0012732.1 mouse_genomes_project 5 79219716 79220827 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004760.1 MGP_WSBEiJ_G0004096.1 mouse_genomes_project 5 127786461 127786991 + Gm42838 antisense antisense MGP_WSBEiJ_T0074023.1 MGP_WSBEiJ_G0029414.1 mouse_genomes_project 5 141205618 141219146 + MGP_WSBEiJ_P0074023 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004782.1 MGP_WSBEiJ_G0004114.1 mouse_genomes_project 5 139755690 139898560 + Gm16599 antisense antisense MGP_WSBEiJ_T0001686.1 MGP_WSBEiJ_G0001608.1 mouse_genomes_project 5 98969716 98972610 + TEC TEC MGP_WSBEiJ_T0001858.1 MGP_WSBEiJ_G0001778.1 mouse_genomes_project 5 147852864 147862485 + TEC TEC MGP_WSBEiJ_T0008314.1 MGP_WSBEiJ_G0006751.1 mouse_genomes_project 5 153231825 153233125 + 2210417A02Rik lincRNA lincRNA MGP_WSBEiJ_T0014448.1 MGP_WSBEiJ_G0012578.1 mouse_genomes_project 5 18552774 18553026 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001628.1 MGP_WSBEiJ_G0001551.1 mouse_genomes_project 5 67213264 67216932 + TEC TEC MGP_WSBEiJ_T0100872.1 MGP_WSBEiJ_G0039330.1 mouse_genomes_project 5 147162629 147163568 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008111.1 MGP_WSBEiJ_G0006617.1 mouse_genomes_project 5 105437880 105469183 + D930016D06Rik lincRNA lincRNA MGP_WSBEiJ_T0008112.1 MGP_WSBEiJ_G0006617.1 mouse_genomes_project 5 105438014 105452523 + D930016D06Rik lincRNA lincRNA MGP_WSBEiJ_T0008113.1 MGP_WSBEiJ_G0006617.1 mouse_genomes_project 5 105453802 105466856 + D930016D06Rik lincRNA lincRNA MGP_WSBEiJ_T0008114.1 MGP_WSBEiJ_G0006617.1 mouse_genomes_project 5 105454348 105466266 + D930016D06Rik lincRNA lincRNA MGP_WSBEiJ_T0008115.1 MGP_WSBEiJ_G0006617.1 mouse_genomes_project 5 105454390 105468477 + D930016D06Rik lincRNA lincRNA MGP_WSBEiJ_T0014459.1 MGP_WSBEiJ_G0012589.1 mouse_genomes_project 5 20114608 20115055 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001715.1 MGP_WSBEiJ_G0001637.1 mouse_genomes_project 5 112640941 112643345 + TEC TEC MGP_WSBEiJ_T0071381.1 MGP_WSBEiJ_G0028925.1 mouse_genomes_project 5 91685254 91732637 - MGP_WSBEiJ_P0071381 Btc protein_coding protein_coding MGP_WSBEiJ_T0071382.1 MGP_WSBEiJ_G0028925.1 mouse_genomes_project 5 91685382 91732465 - Btc protein_coding retained_intron MGP_WSBEiJ_T0071383.1 MGP_WSBEiJ_G0028925.1 mouse_genomes_project 5 91686908 91732503 - MGP_WSBEiJ_P0071383 Btc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071384.1 MGP_WSBEiJ_G0028925.1 mouse_genomes_project 5 91693801 91706230 - Btc protein_coding processed_transcript MGP_WSBEiJ_T0001729.1 MGP_WSBEiJ_G0001651.1 mouse_genomes_project 5 115593508 115598002 - TEC TEC MGP_WSBEiJ_T0099605.1 MGP_WSBEiJ_G0038268.1 mouse_genomes_project 5 87838574 87838697 + Gm25066 snoRNA snoRNA MGP_WSBEiJ_T0068919.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5006411 5299281 - MGP_WSBEiJ_P0068919 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068920.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5006411 5299182 - MGP_WSBEiJ_P0068920 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068921.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5006411 5299281 - MGP_WSBEiJ_P0068921 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068922.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5006411 5299182 - MGP_WSBEiJ_P0068922 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068923.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5006411 5299182 - MGP_WSBEiJ_P0068923 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068924.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5011898 5058384 - MGP_WSBEiJ_P0068924 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068925.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5012739 5053891 - MGP_WSBEiJ_P0068925 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068926.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5012739 5053891 - MGP_WSBEiJ_P0068926 Adam22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068927.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068927 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068928.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068928 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068929.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068929 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068930.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068930 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068931.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068931 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068932.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068932 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068933.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068933 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068934.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068934 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068935.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068935 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068936.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5017220 5053891 - MGP_WSBEiJ_P0068936 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068937.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5023741 5026044 - Adam22 protein_coding retained_intron MGP_WSBEiJ_T0068938.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5028077 5299277 - MGP_WSBEiJ_P0068938 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068939.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5028140 5053891 - MGP_WSBEiJ_P0068939 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068940.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5085266 5299281 - MGP_WSBEiJ_P0068940 Adam22 protein_coding protein_coding MGP_WSBEiJ_T0068941.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5162297 5299334 - Adam22 protein_coding processed_transcript MGP_WSBEiJ_T0068942.1 MGP_WSBEiJ_G0028475.1 mouse_genomes_project 5 5298159 5299360 - Adam22 protein_coding retained_intron MGP_WSBEiJ_T0070868.1 MGP_WSBEiJ_G0028806.1 mouse_genomes_project 5 72026667 72089701 - MGP_WSBEiJ_P0070868 Txk protein_coding protein_coding MGP_WSBEiJ_T0070869.1 MGP_WSBEiJ_G0028806.1 mouse_genomes_project 5 72026667 72072465 - MGP_WSBEiJ_P0070869 Txk protein_coding protein_coding MGP_WSBEiJ_T0070870.1 MGP_WSBEiJ_G0028806.1 mouse_genomes_project 5 72026667 72089705 - MGP_WSBEiJ_P0070870 Txk protein_coding protein_coding MGP_WSBEiJ_T0070871.1 MGP_WSBEiJ_G0028806.1 mouse_genomes_project 5 72026669 72089701 - MGP_WSBEiJ_P0070871 Txk protein_coding protein_coding MGP_WSBEiJ_T0070872.1 MGP_WSBEiJ_G0028806.1 mouse_genomes_project 5 72026675 72071769 - Txk protein_coding processed_transcript MGP_WSBEiJ_T0070873.1 MGP_WSBEiJ_G0028806.1 mouse_genomes_project 5 72026675 72071769 - Txk protein_coding processed_transcript MGP_WSBEiJ_T0070874.1 MGP_WSBEiJ_G0028806.1 mouse_genomes_project 5 72034327 72089702 - Txk protein_coding retained_intron MGP_WSBEiJ_T0070875.1 MGP_WSBEiJ_G0028806.1 mouse_genomes_project 5 72083701 72089698 - Txk protein_coding retained_intron MGP_WSBEiJ_T0008236.1 MGP_WSBEiJ_G0006696.1 mouse_genomes_project 5 128714337 128739832 + 1700048F04Rik lincRNA lincRNA MGP_WSBEiJ_T0014701.1 MGP_WSBEiJ_G0012831.1 mouse_genomes_project 5 124853144 124853762 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073306.1 MGP_WSBEiJ_G0029286.1 mouse_genomes_project 5 128150262 128151657 - MGP_WSBEiJ_P0073306 protein_coding protein_coding MGP_WSBEiJ_T0070753.1 MGP_WSBEiJ_G0028780.1 mouse_genomes_project 5 66317443 66324505 - MGP_WSBEiJ_P0070753 Phox2b protein_coding protein_coding MGP_WSBEiJ_T0070754.1 MGP_WSBEiJ_G0028780.1 mouse_genomes_project 5 66322243 66324261 - MGP_WSBEiJ_P0070754 Phox2b protein_coding protein_coding MGP_WSBEiJ_T0001435.1 MGP_WSBEiJ_G0001363.1 mouse_genomes_project 5 21290257 21291146 + TEC TEC MGP_WSBEiJ_T0070470.1 MGP_WSBEiJ_G0028735.1 mouse_genomes_project 5 50937632 50970443 - MGP_WSBEiJ_P0070470 Lgi2 protein_coding protein_coding MGP_WSBEiJ_T0070471.1 MGP_WSBEiJ_G0028735.1 mouse_genomes_project 5 50937632 50970576 - MGP_WSBEiJ_P0070471 Lgi2 protein_coding protein_coding MGP_WSBEiJ_T0071379.1 MGP_WSBEiJ_G0028923.1 mouse_genomes_project 5 91397273 91415447 + MGP_WSBEiJ_P0071379 Ereg protein_coding protein_coding MGP_WSBEiJ_T0004667.1 MGP_WSBEiJ_G0004032.1 mouse_genomes_project 5 100363423 100365459 + 4930522N08Rik antisense antisense MGP_WSBEiJ_T0072390.1 MGP_WSBEiJ_G0029129.1 mouse_genomes_project 5 116666352 116669277 - MGP_WSBEiJ_P0072390 Gm9936 protein_coding protein_coding MGP_WSBEiJ_T0008285.1 MGP_WSBEiJ_G0006725.1 mouse_genomes_project 5 141063038 141063994 + 9130604C24Rik lincRNA lincRNA MGP_WSBEiJ_T0014684.1 MGP_WSBEiJ_G0012814.1 mouse_genomes_project 5 115825748 115826813 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098348.1 MGP_WSBEiJ_G0037011.1 mouse_genomes_project 5 69161195 69161283 + Gm23661 snRNA snRNA MGP_WSBEiJ_T0099588.1 MGP_WSBEiJ_G0038251.1 mouse_genomes_project 5 53366676 53366805 + Gm24235 snoRNA snoRNA MGP_WSBEiJ_T0001544.1 MGP_WSBEiJ_G0001468.1 mouse_genomes_project 5 49839411 49841413 - TEC TEC MGP_WSBEiJ_T0074043.1 MGP_WSBEiJ_G0029418.1 mouse_genomes_project 5 141316046 141325821 - MGP_WSBEiJ_P0074043 Nyap1 protein_coding protein_coding MGP_WSBEiJ_T0074044.1 MGP_WSBEiJ_G0029418.1 mouse_genomes_project 5 141317060 141327429 - MGP_WSBEiJ_P0074044 Nyap1 protein_coding protein_coding MGP_WSBEiJ_T0074045.1 MGP_WSBEiJ_G0029418.1 mouse_genomes_project 5 141317823 141325541 - MGP_WSBEiJ_P0074045 Nyap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0074046.1 MGP_WSBEiJ_G0029418.1 mouse_genomes_project 5 141319058 141326924 - MGP_WSBEiJ_P0074046 Nyap1 protein_coding protein_coding MGP_WSBEiJ_T0001627.1 MGP_WSBEiJ_G0001550.1 mouse_genomes_project 5 67112469 67113818 + TEC TEC MGP_WSBEiJ_T0008183.1 MGP_WSBEiJ_G0006658.1 mouse_genomes_project 5 117213257 117217616 + Gm42903 lincRNA lincRNA MGP_WSBEiJ_T0008174.1 MGP_WSBEiJ_G0006653.1 mouse_genomes_project 5 114262561 114268060 + Gm42865 lincRNA lincRNA MGP_WSBEiJ_T0069964.1 MGP_WSBEiJ_G0028653.1 mouse_genomes_project 5 32327047 32452744 + MGP_WSBEiJ_P0069964 Fam193a protein_coding protein_coding MGP_WSBEiJ_T0069965.1 MGP_WSBEiJ_G0028653.1 mouse_genomes_project 5 32374424 32457499 + MGP_WSBEiJ_P0069965 Fam193a protein_coding unknown_likely_coding MGP_WSBEiJ_T0069966.1 MGP_WSBEiJ_G0028653.1 mouse_genomes_project 5 32390991 32452035 + MGP_WSBEiJ_P0069966 Fam193a protein_coding protein_coding MGP_WSBEiJ_T0069967.1 MGP_WSBEiJ_G0028653.1 mouse_genomes_project 5 32395858 32408227 + MGP_WSBEiJ_P0069967 Fam193a protein_coding protein_coding MGP_WSBEiJ_T0069968.1 MGP_WSBEiJ_G0028653.1 mouse_genomes_project 5 32408320 32424021 + MGP_WSBEiJ_P0069968 Fam193a protein_coding protein_coding MGP_WSBEiJ_T0069969.1 MGP_WSBEiJ_G0028653.1 mouse_genomes_project 5 32431064 32443992 + MGP_WSBEiJ_P0069969 Fam193a protein_coding protein_coding MGP_WSBEiJ_T0008110.1 MGP_WSBEiJ_G0006616.1 mouse_genomes_project 5 105133548 105140964 - Gm42792 lincRNA lincRNA MGP_WSBEiJ_T0001620.1 MGP_WSBEiJ_G0001543.1 mouse_genomes_project 5 66355212 66358739 + TEC TEC MGP_WSBEiJ_T0071261.1 MGP_WSBEiJ_G0028883.1 mouse_genomes_project 5 88049607 88059341 + MGP_WSBEiJ_P0071261 Csn3 protein_coding protein_coding MGP_WSBEiJ_T0071262.1 MGP_WSBEiJ_G0028883.1 mouse_genomes_project 5 88049635 88055288 + MGP_WSBEiJ_P0071262 Csn3 protein_coding protein_coding MGP_WSBEiJ_T0071263.1 MGP_WSBEiJ_G0028883.1 mouse_genomes_project 5 88049640 88053725 + Csn3 protein_coding retained_intron MGP_WSBEiJ_T0071264.1 MGP_WSBEiJ_G0028883.1 mouse_genomes_project 5 88049655 88053725 + Csn3 protein_coding retained_intron MGP_WSBEiJ_T0071265.1 MGP_WSBEiJ_G0028883.1 mouse_genomes_project 5 88049663 88058945 + MGP_WSBEiJ_P0071265 Csn3 protein_coding protein_coding MGP_WSBEiJ_T0071266.1 MGP_WSBEiJ_G0028883.1 mouse_genomes_project 5 88052276 88054411 + Csn3 protein_coding retained_intron MGP_WSBEiJ_T0098362.1 MGP_WSBEiJ_G0037025.1 mouse_genomes_project 5 86207245 86207352 - Gm25473 snRNA snRNA MGP_WSBEiJ_T0010533.1 MGP_WSBEiJ_G0008690.1 mouse_genomes_project 5 114965935 114965988 - Mir7229 miRNA miRNA MGP_WSBEiJ_T0014753.1 MGP_WSBEiJ_G0012883.1 mouse_genomes_project 5 150178288 150178448 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014463.1 MGP_WSBEiJ_G0012593.1 mouse_genomes_project 5 20336015 20336624 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004736.1 MGP_WSBEiJ_G0004079.1 mouse_genomes_project 5 123768154 123779338 + Gm42917 antisense antisense MGP_WSBEiJ_T0008176.1 MGP_WSBEiJ_G0006655.1 mouse_genomes_project 5 115624908 115628045 - lincRNA lincRNA MGP_WSBEiJ_T0010538.1 MGP_WSBEiJ_G0008695.1 mouse_genomes_project 5 117545319 117545379 + Mir7030 miRNA miRNA MGP_WSBEiJ_T0068824.1 MGP_WSBEiJ_G0028459.1 mouse_genomes_project 5 750244 751639 - MGP_WSBEiJ_P0068824 protein_coding protein_coding MGP_WSBEiJ_T0068826.1 MGP_WSBEiJ_G0028459.1 mouse_genomes_project 5 750247 764918 - MGP_WSBEiJ_P0068826 protein_coding protein_coding MGP_WSBEiJ_T0069052.1 MGP_WSBEiJ_G0028494.1 mouse_genomes_project 5 14975208 15049321 - MGP_WSBEiJ_P0069052 Cd36 protein_coding protein_coding MGP_WSBEiJ_T0069053.1 MGP_WSBEiJ_G0028494.1 mouse_genomes_project 5 14975534 15019247 - MGP_WSBEiJ_P0069053 Cd36 protein_coding protein_coding MGP_WSBEiJ_T0069054.1 MGP_WSBEiJ_G0028494.1 mouse_genomes_project 5 14975885 15088744 - MGP_WSBEiJ_P0069054 Cd36 protein_coding protein_coding MGP_WSBEiJ_T0069055.1 MGP_WSBEiJ_G0028494.1 mouse_genomes_project 5 14975887 15049258 - MGP_WSBEiJ_P0069055 Cd36 protein_coding protein_coding MGP_WSBEiJ_T0069056.1 MGP_WSBEiJ_G0028494.1 mouse_genomes_project 5 14976004 15019268 - MGP_WSBEiJ_P0069056 Cd36 protein_coding protein_coding MGP_WSBEiJ_T0069057.1 MGP_WSBEiJ_G0028494.1 mouse_genomes_project 5 14998113 15088798 - MGP_WSBEiJ_P0069057 Cd36 protein_coding protein_coding MGP_WSBEiJ_T0008105.1 MGP_WSBEiJ_G0006612.1 mouse_genomes_project 5 102902197 102903757 + Gm29707 lincRNA lincRNA MGP_WSBEiJ_T0008106.1 MGP_WSBEiJ_G0006612.1 mouse_genomes_project 5 102902824 102903315 + Gm29707 lincRNA lincRNA MGP_WSBEiJ_T0014452.1 MGP_WSBEiJ_G0012582.1 mouse_genomes_project 5 19129854 19130137 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098391.1 MGP_WSBEiJ_G0037054.1 mouse_genomes_project 5 141812270 141812349 + Gm22956 snRNA snRNA MGP_WSBEiJ_T0071280.1 MGP_WSBEiJ_G0028895.1 mouse_genomes_project 5 88703227 88720846 + MGP_WSBEiJ_P0071280 Enam protein_coding protein_coding MGP_WSBEiJ_T0071281.1 MGP_WSBEiJ_G0028895.1 mouse_genomes_project 5 88703234 88722165 + MGP_WSBEiJ_P0071281 Enam protein_coding protein_coding MGP_WSBEiJ_T0098388.1 MGP_WSBEiJ_G0037051.1 mouse_genomes_project 5 129329296 129329403 - Gm24839 snRNA snRNA MGP_WSBEiJ_T0010537.1 MGP_WSBEiJ_G0008694.1 mouse_genomes_project 5 117479805 117479866 + Mir7029 miRNA miRNA MGP_WSBEiJ_T0100870.1 MGP_WSBEiJ_G0039328.1 mouse_genomes_project 5 144304785 144329058 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014532.1 MGP_WSBEiJ_G0012662.1 mouse_genomes_project 5 48245099 48247396 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014718.1 MGP_WSBEiJ_G0012848.1 mouse_genomes_project 5 139681178 139681953 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014687.1 MGP_WSBEiJ_G0012817.1 mouse_genomes_project 5 116678271 116678616 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071839.1 MGP_WSBEiJ_G0029023.1 mouse_genomes_project 5 108532584 108589046 + MGP_WSBEiJ_P0071839 protein_coding protein_coding MGP_WSBEiJ_T0071840.1 MGP_WSBEiJ_G0029023.1 mouse_genomes_project 5 108549003 108568702 + protein_coding processed_transcript MGP_WSBEiJ_T0007958.1 MGP_WSBEiJ_G0006498.1 mouse_genomes_project 5 31188818 31209843 - Gm20465 lincRNA lincRNA MGP_WSBEiJ_T0008190.1 MGP_WSBEiJ_G0006663.1 mouse_genomes_project 5 118248121 118250336 + Gm13839 lincRNA lincRNA MGP_WSBEiJ_T0070792.1 MGP_WSBEiJ_G0028786.1 mouse_genomes_project 5 67163340 67182468 - MGP_WSBEiJ_P0070792 Gm21905 protein_coding protein_coding MGP_WSBEiJ_T0001789.1 MGP_WSBEiJ_G0001710.1 mouse_genomes_project 5 129853761 129856612 + TEC TEC MGP_WSBEiJ_T0001801.1 MGP_WSBEiJ_G0001722.1 mouse_genomes_project 5 133164247 133164745 + TEC TEC MGP_WSBEiJ_T0074306.1 MGP_WSBEiJ_G0029472.1 mouse_genomes_project 5 144160205 144177073 + MGP_WSBEiJ_P0074306 Nudt1 protein_coding protein_coding MGP_WSBEiJ_T0074308.1 MGP_WSBEiJ_G0029472.1 mouse_genomes_project 5 144171295 144177578 + MGP_WSBEiJ_P0074308 Nudt1 protein_coding protein_coding MGP_WSBEiJ_T0074309.1 MGP_WSBEiJ_G0029472.1 mouse_genomes_project 5 144171344 144177578 + MGP_WSBEiJ_P0074309 Nudt1 protein_coding protein_coding MGP_WSBEiJ_T0074310.1 MGP_WSBEiJ_G0029472.1 mouse_genomes_project 5 144171389 144177382 + MGP_WSBEiJ_P0074310 Nudt1 protein_coding protein_coding MGP_WSBEiJ_T0074311.1 MGP_WSBEiJ_G0029472.1 mouse_genomes_project 5 144171830 144177249 + MGP_WSBEiJ_P0074311 Nudt1 protein_coding protein_coding MGP_WSBEiJ_T0074312.1 MGP_WSBEiJ_G0029472.1 mouse_genomes_project 5 144171859 144175142 + MGP_WSBEiJ_P0074312 Nudt1 protein_coding protein_coding MGP_WSBEiJ_T0074313.1 MGP_WSBEiJ_G0029472.1 mouse_genomes_project 5 144174020 144175258 + Nudt1 protein_coding processed_transcript MGP_WSBEiJ_T0069451.1 MGP_WSBEiJ_G0028574.1 mouse_genomes_project 5 27925559 27945877 + MGP_WSBEiJ_P0069451 protein_coding protein_coding MGP_WSBEiJ_T0069452.1 MGP_WSBEiJ_G0028574.1 mouse_genomes_project 5 27925576 27939246 + protein_coding retained_intron MGP_WSBEiJ_T0069453.1 MGP_WSBEiJ_G0028574.1 mouse_genomes_project 5 27925581 27955826 + MGP_WSBEiJ_P0069453 protein_coding unknown_likely_coding MGP_WSBEiJ_T0069454.1 MGP_WSBEiJ_G0028574.1 mouse_genomes_project 5 27925604 27947815 + MGP_WSBEiJ_P0069454 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069455.1 MGP_WSBEiJ_G0028574.1 mouse_genomes_project 5 27945881 27950017 + protein_coding retained_intron MGP_WSBEiJ_T0069456.1 MGP_WSBEiJ_G0028574.1 mouse_genomes_project 5 27949483 27951900 + protein_coding retained_intron MGP_WSBEiJ_T0074648.1 MGP_WSBEiJ_G0029550.1 mouse_genomes_project 5 150527801 150602489 + MGP_WSBEiJ_P0074648 Cdk8 protein_coding protein_coding MGP_WSBEiJ_T0074649.1 MGP_WSBEiJ_G0029550.1 mouse_genomes_project 5 150528415 150607276 + MGP_WSBEiJ_P0074649 Cdk8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074650.1 MGP_WSBEiJ_G0029550.1 mouse_genomes_project 5 150528473 150593235 + MGP_WSBEiJ_P0074650 Cdk8 protein_coding protein_coding MGP_WSBEiJ_T0074651.1 MGP_WSBEiJ_G0029550.1 mouse_genomes_project 5 150528570 150572101 + MGP_WSBEiJ_P0074651 Cdk8 protein_coding protein_coding MGP_WSBEiJ_T0074652.1 MGP_WSBEiJ_G0029550.1 mouse_genomes_project 5 150554788 150557229 + Cdk8 protein_coding retained_intron MGP_WSBEiJ_T0074653.1 MGP_WSBEiJ_G0029550.1 mouse_genomes_project 5 150586531 150592659 + Cdk8 protein_coding processed_transcript MGP_WSBEiJ_T0074654.1 MGP_WSBEiJ_G0029550.1 mouse_genomes_project 5 150595400 150607221 + Cdk8 protein_coding retained_intron MGP_WSBEiJ_T0074655.1 MGP_WSBEiJ_G0029550.1 mouse_genomes_project 5 150596855 150600001 + Cdk8 protein_coding retained_intron MGP_WSBEiJ_T0100111.1 MGP_WSBEiJ_G0038713.1 mouse_genomes_project 5 75708398 75708868 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0071339.1 MGP_WSBEiJ_G0028909.1 mouse_genomes_project 5 90778539 90794762 + MGP_WSBEiJ_P0071339 Alb protein_coding protein_coding MGP_WSBEiJ_T0071340.1 MGP_WSBEiJ_G0028909.1 mouse_genomes_project 5 90779961 90780365 + Alb protein_coding processed_transcript MGP_WSBEiJ_T0071341.1 MGP_WSBEiJ_G0028909.1 mouse_genomes_project 5 90780342 90792820 + Alb protein_coding processed_transcript MGP_WSBEiJ_T0001444.1 MGP_WSBEiJ_G0001371.1 mouse_genomes_project 5 25851663 25852028 - TEC TEC MGP_WSBEiJ_T0014651.1 MGP_WSBEiJ_G0012781.1 mouse_genomes_project 5 105918407 105918914 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072771.1 MGP_WSBEiJ_G0029206.1 mouse_genomes_project 5 123889319 123894481 - MGP_WSBEiJ_P0072771 Adam1b protein_coding protein_coding MGP_WSBEiJ_T0008339.1 MGP_WSBEiJ_G0006767.1 mouse_genomes_project 5 154377075 154386823 - Gm21221 lincRNA lincRNA MGP_WSBEiJ_T0071748.1 MGP_WSBEiJ_G0029001.1 mouse_genomes_project 5 105214918 105227206 + MGP_WSBEiJ_P0071748 Mepe protein_coding protein_coding MGP_WSBEiJ_T0014699.1 MGP_WSBEiJ_G0012829.1 mouse_genomes_project 5 123927155 123927488 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073480.1 MGP_WSBEiJ_G0029322.1 mouse_genomes_project 5 133302002 133333968 + Tyw1 protein_coding retained_intron MGP_WSBEiJ_T0073481.1 MGP_WSBEiJ_G0029322.1 mouse_genomes_project 5 133303373 133326333 + MGP_WSBEiJ_P0073481 Tyw1 protein_coding protein_coding MGP_WSBEiJ_T0073482.1 MGP_WSBEiJ_G0029322.1 mouse_genomes_project 5 133303373 133393448 + MGP_WSBEiJ_P0073482 Tyw1 protein_coding protein_coding MGP_WSBEiJ_T0073483.1 MGP_WSBEiJ_G0029322.1 mouse_genomes_project 5 133305251 133318008 + MGP_WSBEiJ_P0073483 Tyw1 protein_coding protein_coding MGP_WSBEiJ_T0071186.1 MGP_WSBEiJ_G0028861.1 mouse_genomes_project 5 86658254 86676435 - MGP_WSBEiJ_P0071186 Tmprss11b protein_coding protein_coding MGP_WSBEiJ_T0011413.1 MGP_WSBEiJ_G0009570.1 mouse_genomes_project 5 135973477 135973756 + Gm25722 misc_RNA misc_RNA MGP_WSBEiJ_T0007999.1 MGP_WSBEiJ_G0006526.1 mouse_genomes_project 5 44170242 44175683 - 4930405L22Rik lincRNA lincRNA MGP_WSBEiJ_T0004653.1 MGP_WSBEiJ_G0004025.1 mouse_genomes_project 5 91378796 91397425 - Gm42532 antisense antisense MGP_WSBEiJ_T0014420.1 MGP_WSBEiJ_G0012550.1 mouse_genomes_project 5 4864067 4864359 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070575.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63867863 63901190 + MGP_WSBEiJ_P0070575 Klf3 protein_coding protein_coding MGP_WSBEiJ_T0070576.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63868052 63888124 + Klf3 protein_coding retained_intron MGP_WSBEiJ_T0070577.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63868097 63887187 + Klf3 protein_coding processed_transcript MGP_WSBEiJ_T0070578.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63876826 63896618 + MGP_WSBEiJ_P0070578 Klf3 protein_coding protein_coding MGP_WSBEiJ_T0070579.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63876827 63883774 + Klf3 protein_coding retained_intron MGP_WSBEiJ_T0070580.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63876871 63887258 + MGP_WSBEiJ_P0070580 Klf3 protein_coding protein_coding MGP_WSBEiJ_T0070581.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63880332 63892562 + Klf3 protein_coding retained_intron MGP_WSBEiJ_T0070582.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63887362 63894303 + MGP_WSBEiJ_P0070582 Klf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070583.1 MGP_WSBEiJ_G0028756.1 mouse_genomes_project 5 63893941 63896686 + MGP_WSBEiJ_P0070583 Klf3 protein_coding protein_coding MGP_WSBEiJ_T0008056.1 MGP_WSBEiJ_G0006573.1 mouse_genomes_project 5 77096178 77104848 + Gm42761 lincRNA lincRNA MGP_WSBEiJ_T0017570.1 MGP_WSBEiJ_G0015024.1 mouse_genomes_project 5 73437881 73438459 + Usp46os2 processed_transcript retained_intron MGP_WSBEiJ_T0017571.1 MGP_WSBEiJ_G0015024.1 mouse_genomes_project 5 73437882 73438459 + Usp46os2 processed_transcript processed_transcript MGP_WSBEiJ_T0017572.1 MGP_WSBEiJ_G0015024.1 mouse_genomes_project 5 73437887 73447223 + Usp46os2 processed_transcript antisense MGP_WSBEiJ_T0014635.1 MGP_WSBEiJ_G0012765.1 mouse_genomes_project 5 98653657 98653967 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072625.1 MGP_WSBEiJ_G0029172.1 mouse_genomes_project 5 120133609 120230235 - MGP_WSBEiJ_P0072625 Fbxw8 protein_coding protein_coding MGP_WSBEiJ_T0072626.1 MGP_WSBEiJ_G0029172.1 mouse_genomes_project 5 120145699 120230197 - Fbxw8 protein_coding retained_intron MGP_WSBEiJ_T0074665.1 MGP_WSBEiJ_G0029554.1 mouse_genomes_project 5 151169272 151173420 + MGP_WSBEiJ_P0074665 Rpl21 protein_coding protein_coding MGP_WSBEiJ_T0074666.1 MGP_WSBEiJ_G0029554.1 mouse_genomes_project 5 151169528 151170995 + Rpl21 protein_coding retained_intron MGP_WSBEiJ_T0074667.1 MGP_WSBEiJ_G0029554.1 mouse_genomes_project 5 151169577 151172375 + MGP_WSBEiJ_P0074667 Rpl21 protein_coding protein_coding MGP_WSBEiJ_T0074668.1 MGP_WSBEiJ_G0029554.1 mouse_genomes_project 5 151169584 151172376 + MGP_WSBEiJ_P0074668 Rpl21 protein_coding protein_coding MGP_WSBEiJ_T0074669.1 MGP_WSBEiJ_G0029554.1 mouse_genomes_project 5 151170574 151171354 + Rpl21 protein_coding retained_intron MGP_WSBEiJ_T0074670.1 MGP_WSBEiJ_G0029554.1 mouse_genomes_project 5 151171595 151172376 + Rpl21 protein_coding retained_intron MGP_WSBEiJ_T0001677.1 MGP_WSBEiJ_G0001599.1 mouse_genomes_project 5 93619601 93621509 - TEC TEC MGP_WSBEiJ_T0071932.1 MGP_WSBEiJ_G0029041.1 mouse_genomes_project 5 109603303 109611058 - MGP_WSBEiJ_P0071932 Mfsd7a protein_coding protein_coding MGP_WSBEiJ_T0070667.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64887133 64963323 + MGP_WSBEiJ_P0070667 N4bp2 protein_coding protein_coding MGP_WSBEiJ_T0070668.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64888547 64911822 + N4bp2 protein_coding processed_transcript MGP_WSBEiJ_T0070669.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64888547 64900383 + N4bp2 protein_coding retained_intron MGP_WSBEiJ_T0070670.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64888688 64959865 + MGP_WSBEiJ_P0070670 N4bp2 protein_coding protein_coding MGP_WSBEiJ_T0070671.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64888688 64948857 + MGP_WSBEiJ_P0070671 N4bp2 protein_coding protein_coding MGP_WSBEiJ_T0070672.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64908500 64910664 + N4bp2 protein_coding retained_intron MGP_WSBEiJ_T0070673.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64930243 64933266 + N4bp2 protein_coding retained_intron MGP_WSBEiJ_T0070674.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64940322 64945644 + N4bp2 protein_coding retained_intron MGP_WSBEiJ_T0070675.1 MGP_WSBEiJ_G0028771.1 mouse_genomes_project 5 64958439 64960089 + N4bp2 protein_coding retained_intron MGP_WSBEiJ_T0071435.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92733011 92798009 + MGP_WSBEiJ_P0071435 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071436.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92733014 92798206 + MGP_WSBEiJ_P0071436 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071437.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92733025 92749900 + Art3 protein_coding processed_transcript MGP_WSBEiJ_T0071438.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92733025 92823079 + MGP_WSBEiJ_P0071438 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071439.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92733025 92823076 + MGP_WSBEiJ_P0071439 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071445.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92781004 92798121 + MGP_WSBEiJ_P0071445 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071446.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92791961 92798092 + MGP_WSBEiJ_P0071446 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071447.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92792837 92797800 + MGP_WSBEiJ_P0071447 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071448.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92792920 92797670 + MGP_WSBEiJ_P0071448 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071449.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92792925 92798051 + MGP_WSBEiJ_P0071449 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071450.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92793217 92823073 + Art3 protein_coding processed_transcript MGP_WSBEiJ_T0071451.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92793217 92823073 + MGP_WSBEiJ_P0071451 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071452.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92793217 92823073 + MGP_WSBEiJ_P0071452 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071453.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92793217 92823073 + MGP_WSBEiJ_P0071453 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071454.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92793217 92823074 + MGP_WSBEiJ_P0071454 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071455.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92793217 92823073 + MGP_WSBEiJ_P0071455 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071456.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92797659 92823073 + MGP_WSBEiJ_P0071456 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071457.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92798133 92823074 + MGP_WSBEiJ_P0071457 Art3 protein_coding protein_coding MGP_WSBEiJ_T0071458.1 MGP_WSBEiJ_G0028937.1 mouse_genomes_project 5 92808225 92822898 + MGP_WSBEiJ_P0071458 Art3 protein_coding protein_coding MGP_WSBEiJ_T0073828.1 MGP_WSBEiJ_G0029380.1 mouse_genomes_project 5 139607974 139633741 - MGP_WSBEiJ_P0073828 Orai2 protein_coding protein_coding MGP_WSBEiJ_T0073829.1 MGP_WSBEiJ_G0029380.1 mouse_genomes_project 5 139607979 139633656 - MGP_WSBEiJ_P0073829 Orai2 protein_coding protein_coding MGP_WSBEiJ_T0073830.1 MGP_WSBEiJ_G0029380.1 mouse_genomes_project 5 139610793 139633662 - MGP_WSBEiJ_P0073830 Orai2 protein_coding protein_coding MGP_WSBEiJ_T0073831.1 MGP_WSBEiJ_G0029380.1 mouse_genomes_project 5 139629286 139633661 - Orai2 protein_coding retained_intron MGP_WSBEiJ_T0014681.1 MGP_WSBEiJ_G0012811.1 mouse_genomes_project 5 112382445 112382943 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014518.1 MGP_WSBEiJ_G0012648.1 mouse_genomes_project 5 39609597 39610066 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014700.1 MGP_WSBEiJ_G0012830.1 mouse_genomes_project 5 124802995 124803536 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097424.1 MGP_WSBEiJ_G0036098.1 mouse_genomes_project 5 132749059 132750399 + Gm15903 sense_intronic sense_intronic MGP_WSBEiJ_T0097425.1 MGP_WSBEiJ_G0036098.1 mouse_genomes_project 5 132750185 132753694 + Gm15903 sense_intronic sense_intronic MGP_WSBEiJ_T0014559.1 MGP_WSBEiJ_G0012689.1 mouse_genomes_project 5 59713171 59713940 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074085.1 MGP_WSBEiJ_G0029429.1 mouse_genomes_project 5 141668701 141691566 + MGP_WSBEiJ_P0074085 Zkscan1 protein_coding protein_coding MGP_WSBEiJ_T0074086.1 MGP_WSBEiJ_G0029429.1 mouse_genomes_project 5 141668701 141691566 + MGP_WSBEiJ_P0074086 Zkscan1 protein_coding protein_coding MGP_WSBEiJ_T0074087.1 MGP_WSBEiJ_G0029429.1 mouse_genomes_project 5 141668737 141688238 + MGP_WSBEiJ_P0074087 Zkscan1 protein_coding protein_coding MGP_WSBEiJ_T0074088.1 MGP_WSBEiJ_G0029429.1 mouse_genomes_project 5 141676440 141688237 + MGP_WSBEiJ_P0074088 Zkscan1 protein_coding protein_coding MGP_WSBEiJ_T0072559.1 MGP_WSBEiJ_G0029158.1 mouse_genomes_project 5 117969427 118020858 - MGP_WSBEiJ_P0072559 Tmem233 protein_coding protein_coding MGP_WSBEiJ_T0073435.1 MGP_WSBEiJ_G0029314.1 mouse_genomes_project 5 133016653 133030693 - MGP_WSBEiJ_P0073435 Gusb protein_coding protein_coding MGP_WSBEiJ_T0073436.1 MGP_WSBEiJ_G0029314.1 mouse_genomes_project 5 133016665 133030472 - MGP_WSBEiJ_P0073436 Gusb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073437.1 MGP_WSBEiJ_G0029314.1 mouse_genomes_project 5 133017223 133018285 - Gusb protein_coding retained_intron MGP_WSBEiJ_T0073438.1 MGP_WSBEiJ_G0029314.1 mouse_genomes_project 5 133026298 133030509 - MGP_WSBEiJ_P0073438 Gusb protein_coding protein_coding MGP_WSBEiJ_T0073439.1 MGP_WSBEiJ_G0029314.1 mouse_genomes_project 5 133027238 133030525 - MGP_WSBEiJ_P0073439 Gusb protein_coding protein_coding MGP_WSBEiJ_T0073440.1 MGP_WSBEiJ_G0029314.1 mouse_genomes_project 5 133027261 133030609 - Gusb protein_coding retained_intron MGP_WSBEiJ_T0001575.1 MGP_WSBEiJ_G0001499.1 mouse_genomes_project 5 56783158 56784901 + TEC TEC MGP_WSBEiJ_T0007922.1 MGP_WSBEiJ_G0006477.1 mouse_genomes_project 5 19782542 19786336 - Gm43657 lincRNA lincRNA MGP_WSBEiJ_T0014431.1 MGP_WSBEiJ_G0012561.1 mouse_genomes_project 5 10921531 10922042 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071983.1 MGP_WSBEiJ_G0029049.1 mouse_genomes_project 5 109878047 109890685 + MGP_WSBEiJ_P0071983 Fgfrl1 protein_coding protein_coding MGP_WSBEiJ_T0071984.1 MGP_WSBEiJ_G0029049.1 mouse_genomes_project 5 109879729 109890488 + MGP_WSBEiJ_P0071984 Fgfrl1 protein_coding protein_coding MGP_WSBEiJ_T0071985.1 MGP_WSBEiJ_G0029049.1 mouse_genomes_project 5 109879767 109894073 + MGP_WSBEiJ_P0071985 Fgfrl1 protein_coding protein_coding MGP_WSBEiJ_T0071986.1 MGP_WSBEiJ_G0029049.1 mouse_genomes_project 5 109881647 109894045 + MGP_WSBEiJ_P0071986 Fgfrl1 protein_coding protein_coding MGP_WSBEiJ_T0071987.1 MGP_WSBEiJ_G0029049.1 mouse_genomes_project 5 109892222 109893021 + Fgfrl1 protein_coding retained_intron MGP_WSBEiJ_T0014664.1 MGP_WSBEiJ_G0012794.1 mouse_genomes_project 5 109178937 109179359 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098327.1 MGP_WSBEiJ_G0036990.1 mouse_genomes_project 5 19911167 19911274 - Gm22887 snRNA snRNA MGP_WSBEiJ_T0097064.1 MGP_WSBEiJ_G0035745.1 mouse_genomes_project 5 51814780 51814894 - n-R5s172 rRNA rRNA MGP_WSBEiJ_T0073163.1 MGP_WSBEiJ_G0029266.1 mouse_genomes_project 5 126824144 126825098 + MGP_WSBEiJ_P0073163 Arl6ip4 protein_coding protein_coding MGP_WSBEiJ_T0073164.1 MGP_WSBEiJ_G0029266.1 mouse_genomes_project 5 126824154 126826251 + MGP_WSBEiJ_P0073164 Arl6ip4 protein_coding protein_coding MGP_WSBEiJ_T0073165.1 MGP_WSBEiJ_G0029266.1 mouse_genomes_project 5 126824177 126826151 + MGP_WSBEiJ_P0073165 Arl6ip4 protein_coding protein_coding MGP_WSBEiJ_T0073166.1 MGP_WSBEiJ_G0029266.1 mouse_genomes_project 5 126824734 126826089 + MGP_WSBEiJ_P0073166 Arl6ip4 protein_coding protein_coding MGP_WSBEiJ_T0073167.1 MGP_WSBEiJ_G0029266.1 mouse_genomes_project 5 126825366 126826246 + MGP_WSBEiJ_P0073167 Arl6ip4 protein_coding protein_coding MGP_WSBEiJ_T0014764.1 MGP_WSBEiJ_G0012894.1 mouse_genomes_project 5 152291833 152292308 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004732.1 MGP_WSBEiJ_G0004075.1 mouse_genomes_project 5 122651138 122664878 - Gm27199 antisense antisense MGP_WSBEiJ_T0001821.1 MGP_WSBEiJ_G0001742.1 mouse_genomes_project 5 135170558 135177885 - TEC TEC MGP_WSBEiJ_T0014691.1 MGP_WSBEiJ_G0012821.1 mouse_genomes_project 5 117154318 117154456 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001501.1 MGP_WSBEiJ_G0001426.1 mouse_genomes_project 5 42895872 42897908 - TEC TEC MGP_WSBEiJ_T0072507.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117464087 117522436 + MGP_WSBEiJ_P0072507 Gcn1l1 protein_coding protein_coding MGP_WSBEiJ_T0072508.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117464105 117483095 + Gcn1l1 protein_coding retained_intron MGP_WSBEiJ_T0072509.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117464107 117480137 + Gcn1l1 protein_coding retained_intron MGP_WSBEiJ_T0072510.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117464109 117483604 + Gcn1l1 protein_coding retained_intron MGP_WSBEiJ_T0072511.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117464136 117466054 + Gcn1l1 protein_coding retained_intron MGP_WSBEiJ_T0072512.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117481253 117486275 + Gcn1l1 protein_coding processed_transcript MGP_WSBEiJ_T0072513.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117504463 117522430 + Gcn1l1 protein_coding processed_transcript MGP_WSBEiJ_T0072514.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117509581 117510360 + Gcn1l1 protein_coding retained_intron MGP_WSBEiJ_T0072515.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117511619 117513178 + Gcn1l1 protein_coding processed_transcript MGP_WSBEiJ_T0072516.1 MGP_WSBEiJ_G0029153.1 mouse_genomes_project 5 117514660 117515808 + Gcn1l1 protein_coding retained_intron MGP_WSBEiJ_T0098366.1 MGP_WSBEiJ_G0037029.1 mouse_genomes_project 5 96401778 96401885 + Gm25937 snRNA snRNA MGP_WSBEiJ_T0071231.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87795797 87802858 - MGP_WSBEiJ_P0071231 Csn2 protein_coding protein_coding MGP_WSBEiJ_T0071232.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87795798 87802637 - Csn2 protein_coding retained_intron MGP_WSBEiJ_T0071233.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87795801 87799840 - Csn2 protein_coding retained_intron MGP_WSBEiJ_T0071234.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87795801 87802653 - MGP_WSBEiJ_P0071234 Csn2 protein_coding protein_coding MGP_WSBEiJ_T0071235.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87795978 87802637 - MGP_WSBEiJ_P0071235 Csn2 protein_coding protein_coding MGP_WSBEiJ_T0071236.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87796042 87802649 - MGP_WSBEiJ_P0071236 Csn2 protein_coding protein_coding MGP_WSBEiJ_T0071237.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87796102 87802649 - MGP_WSBEiJ_P0071237 Csn2 protein_coding protein_coding MGP_WSBEiJ_T0071238.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87797009 87801276 - MGP_WSBEiJ_P0071238 Csn2 protein_coding protein_coding MGP_WSBEiJ_T0071239.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87797737 87799715 - Csn2 protein_coding processed_transcript MGP_WSBEiJ_T0071240.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87800992 87802649 - Csn2 protein_coding retained_intron MGP_WSBEiJ_T0071241.1 MGP_WSBEiJ_G0028878.1 mouse_genomes_project 5 87801076 87802649 - Csn2 protein_coding retained_intron MGP_WSBEiJ_T0001775.1 MGP_WSBEiJ_G0001697.1 mouse_genomes_project 5 126025622 126027770 + TEC TEC MGP_WSBEiJ_T0071400.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92425368 92457539 - MGP_WSBEiJ_P0071400 G3bp2 protein_coding protein_coding MGP_WSBEiJ_T0071401.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92425386 92457701 - MGP_WSBEiJ_P0071401 G3bp2 protein_coding protein_coding MGP_WSBEiJ_T0071402.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92426939 92457220 - MGP_WSBEiJ_P0071402 G3bp2 protein_coding protein_coding MGP_WSBEiJ_T0071403.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92426939 92457495 - MGP_WSBEiJ_P0071403 G3bp2 protein_coding protein_coding MGP_WSBEiJ_T0071404.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92427722 92457640 - MGP_WSBEiJ_P0071404 G3bp2 protein_coding protein_coding MGP_WSBEiJ_T0071405.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92429583 92440739 - G3bp2 protein_coding processed_transcript MGP_WSBEiJ_T0071406.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92431041 92440730 - G3bp2 protein_coding retained_intron MGP_WSBEiJ_T0071407.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92439736 92446641 - MGP_WSBEiJ_P0071407 G3bp2 protein_coding protein_coding MGP_WSBEiJ_T0071408.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92441530 92457245 - MGP_WSBEiJ_P0071408 G3bp2 protein_coding protein_coding MGP_WSBEiJ_T0071409.1 MGP_WSBEiJ_G0028930.1 mouse_genomes_project 5 92443021 92457699 - G3bp2 protein_coding retained_intron MGP_WSBEiJ_T0008088.1 MGP_WSBEiJ_G0006599.1 mouse_genomes_project 5 99690309 99821891 - Gm43251 lincRNA lincRNA MGP_WSBEiJ_T0004737.1 MGP_WSBEiJ_G0004080.1 mouse_genomes_project 5 123770491 123773362 + antisense antisense MGP_WSBEiJ_T0001512.1 MGP_WSBEiJ_G0001437.1 mouse_genomes_project 5 45067627 45069481 + TEC TEC MGP_WSBEiJ_T0014563.1 MGP_WSBEiJ_G0012693.1 mouse_genomes_project 5 60954188 60954805 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014560.1 MGP_WSBEiJ_G0012690.1 mouse_genomes_project 5 60248639 60249477 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099616.1 MGP_WSBEiJ_G0038279.1 mouse_genomes_project 5 109021619 109021751 + Gm22270 snoRNA snoRNA MGP_WSBEiJ_T0100877.1 MGP_WSBEiJ_G0039335.1 mouse_genomes_project 5 152922461 152922776 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008109.1 MGP_WSBEiJ_G0006615.1 mouse_genomes_project 5 104199944 104202298 - 5430427N15Rik lincRNA lincRNA MGP_WSBEiJ_T0071792.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107675750 107756592 - MGP_WSBEiJ_P0071792 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071793.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107675752 107755736 - MGP_WSBEiJ_P0071793 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071794.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107675753 107756592 - MGP_WSBEiJ_P0071794 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071795.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107675755 107756359 - MGP_WSBEiJ_P0071795 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071796.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107676084 107683398 - Zfp644 protein_coding processed_transcript MGP_WSBEiJ_T0071797.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107676981 107756567 - Zfp644 protein_coding processed_transcript MGP_WSBEiJ_T0071798.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107695839 107756588 - MGP_WSBEiJ_P0071798 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071799.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107696850 107756326 - MGP_WSBEiJ_P0071799 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071800.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107697101 107726768 - MGP_WSBEiJ_P0071800 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071801.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107697269 107756412 - MGP_WSBEiJ_P0071801 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071802.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107697316 107756326 - MGP_WSBEiJ_P0071802 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071803.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107697459 107756412 - MGP_WSBEiJ_P0071803 Zfp644 protein_coding protein_coding MGP_WSBEiJ_T0071804.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107747673 107754779 - Zfp644 protein_coding retained_intron MGP_WSBEiJ_T0071805.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107748719 107755928 - Zfp644 protein_coding retained_intron MGP_WSBEiJ_T0071806.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107749490 107756308 - Zfp644 protein_coding processed_transcript MGP_WSBEiJ_T0071807.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107749503 107756306 - Zfp644 protein_coding processed_transcript MGP_WSBEiJ_T0071808.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107754810 107757049 - Zfp644 protein_coding processed_transcript MGP_WSBEiJ_T0071809.1 MGP_WSBEiJ_G0029016.1 mouse_genomes_project 5 107755115 107755773 - Zfp644 protein_coding processed_transcript MGP_WSBEiJ_T0098365.1 MGP_WSBEiJ_G0037028.1 mouse_genomes_project 5 93443291 93443399 - Gm25521 snRNA snRNA MGP_WSBEiJ_T0070592.1 MGP_WSBEiJ_G0028760.1 mouse_genomes_project 5 64200939 64203370 + Klhl5 protein_coding retained_intron MGP_WSBEiJ_T0070593.1 MGP_WSBEiJ_G0028760.1 mouse_genomes_project 5 64201184 64239198 + MGP_WSBEiJ_P0070593 Klhl5 protein_coding protein_coding MGP_WSBEiJ_T0070594.1 MGP_WSBEiJ_G0028760.1 mouse_genomes_project 5 64201190 64204327 + Klhl5 protein_coding processed_transcript MGP_WSBEiJ_T0070595.1 MGP_WSBEiJ_G0028760.1 mouse_genomes_project 5 64201458 64223430 + Klhl5 protein_coding processed_transcript MGP_WSBEiJ_T0070596.1 MGP_WSBEiJ_G0028760.1 mouse_genomes_project 5 64225921 64237973 + MGP_WSBEiJ_P0070596 Klhl5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014432.1 MGP_WSBEiJ_G0012562.1 mouse_genomes_project 5 10926261 10927225 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014747.1 MGP_WSBEiJ_G0012877.1 mouse_genomes_project 5 148824379 148824550 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004582.1 MGP_WSBEiJ_G0003967.1 mouse_genomes_project 5 30352250 30437021 - antisense antisense MGP_WSBEiJ_T0099619.1 MGP_WSBEiJ_G0038282.1 mouse_genomes_project 5 112149745 112149878 - Gm26079 snoRNA snoRNA MGP_WSBEiJ_T0001530.1 MGP_WSBEiJ_G0001454.1 mouse_genomes_project 5 47362586 47363918 - TEC TEC MGP_WSBEiJ_T0001790.1 MGP_WSBEiJ_G0001711.1 mouse_genomes_project 5 130144450 130145551 + TEC TEC MGP_WSBEiJ_T0004708.1 MGP_WSBEiJ_G0004062.1 mouse_genomes_project 5 116784351 116786931 + Hnf1aos2 antisense antisense MGP_WSBEiJ_T0008198.1 MGP_WSBEiJ_G0006670.1 mouse_genomes_project 5 119406291 119410651 + Gm15728 lincRNA lincRNA MGP_WSBEiJ_T0008199.1 MGP_WSBEiJ_G0006670.1 mouse_genomes_project 5 119406367 119407738 + Gm15728 lincRNA lincRNA MGP_WSBEiJ_T0100099.1 MGP_WSBEiJ_G0038704.1 mouse_genomes_project 5 31031714 31032876 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100100.1 MGP_WSBEiJ_G0038704.1 mouse_genomes_project 5 31032401 31033188 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0007993.1 MGP_WSBEiJ_G0006521.1 mouse_genomes_project 5 42625841 42644775 - Gm42985 lincRNA lincRNA MGP_WSBEiJ_T0069468.1 MGP_WSBEiJ_G0028577.1 mouse_genomes_project 5 28054000 28093650 + MGP_WSBEiJ_P0069468 Drc1 protein_coding protein_coding MGP_WSBEiJ_T0069469.1 MGP_WSBEiJ_G0028577.1 mouse_genomes_project 5 28065975 28066958 + Drc1 protein_coding processed_transcript MGP_WSBEiJ_T0069470.1 MGP_WSBEiJ_G0028577.1 mouse_genomes_project 5 28071512 28082738 + Drc1 protein_coding processed_transcript MGP_WSBEiJ_T0069471.1 MGP_WSBEiJ_G0028577.1 mouse_genomes_project 5 28079629 28083323 + Drc1 protein_coding processed_transcript MGP_WSBEiJ_T0008272.1 MGP_WSBEiJ_G0006715.1 mouse_genomes_project 5 135703212 135704373 + Gm28616 lincRNA lincRNA MGP_WSBEiJ_T0073753.1 MGP_WSBEiJ_G0029367.1 mouse_genomes_project 5 139196001 139207944 + MGP_WSBEiJ_P0073753 Mdh2 protein_coding protein_coding MGP_WSBEiJ_T0073754.1 MGP_WSBEiJ_G0029367.1 mouse_genomes_project 5 139196157 139197779 + Mdh2 protein_coding retained_intron MGP_WSBEiJ_T0073755.1 MGP_WSBEiJ_G0029367.1 mouse_genomes_project 5 139196183 139207951 + MGP_WSBEiJ_P0073755 Mdh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073756.1 MGP_WSBEiJ_G0029367.1 mouse_genomes_project 5 139196198 139202163 + Mdh2 protein_coding retained_intron MGP_WSBEiJ_T0073757.1 MGP_WSBEiJ_G0029367.1 mouse_genomes_project 5 139196206 139205200 + MGP_WSBEiJ_P0073757 Mdh2 protein_coding protein_coding MGP_WSBEiJ_T0073758.1 MGP_WSBEiJ_G0029367.1 mouse_genomes_project 5 139196210 139203895 + MGP_WSBEiJ_P0073758 Mdh2 protein_coding protein_coding MGP_WSBEiJ_T0073759.1 MGP_WSBEiJ_G0029367.1 mouse_genomes_project 5 139196243 139201290 + Mdh2 protein_coding retained_intron MGP_WSBEiJ_T0010501.1 MGP_WSBEiJ_G0008658.1 mouse_genomes_project 5 29466143 29466253 - Mir3473e miRNA miRNA MGP_WSBEiJ_T0014483.1 MGP_WSBEiJ_G0012613.1 mouse_genomes_project 5 25499210 25500192 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001833.1 MGP_WSBEiJ_G0001754.1 mouse_genomes_project 5 137432041 137433409 + TEC TEC MGP_WSBEiJ_T0001834.1 MGP_WSBEiJ_G0001754.1 mouse_genomes_project 5 137432053 137432652 + TEC TEC MGP_WSBEiJ_T0004774.1 MGP_WSBEiJ_G0004108.1 mouse_genomes_project 5 138345024 138360332 - Wbscr25 antisense antisense MGP_WSBEiJ_T0004775.1 MGP_WSBEiJ_G0004108.1 mouse_genomes_project 5 138351490 138359489 - Wbscr25 antisense antisense MGP_WSBEiJ_T0001414.1 MGP_WSBEiJ_G0001342.1 mouse_genomes_project 5 10619115 10621314 + TEC TEC MGP_WSBEiJ_T0074589.1 MGP_WSBEiJ_G0029534.1 mouse_genomes_project 5 149272696 149286869 - MGP_WSBEiJ_P0074589 Pdap1 protein_coding protein_coding MGP_WSBEiJ_T0074590.1 MGP_WSBEiJ_G0029534.1 mouse_genomes_project 5 149275747 149283341 - Pdap1 protein_coding processed_transcript MGP_WSBEiJ_T0074591.1 MGP_WSBEiJ_G0029534.1 mouse_genomes_project 5 149277034 149281161 - Pdap1 protein_coding retained_intron MGP_WSBEiJ_T0074592.1 MGP_WSBEiJ_G0029534.1 mouse_genomes_project 5 149278868 149281315 - Pdap1 protein_coding retained_intron MGP_WSBEiJ_T0074593.1 MGP_WSBEiJ_G0029534.1 mouse_genomes_project 5 149283222 149286629 - Pdap1 protein_coding retained_intron MGP_WSBEiJ_T0008203.1 MGP_WSBEiJ_G0006674.1 mouse_genomes_project 5 121087042 121095856 + 4930413E15Rik lincRNA lincRNA MGP_WSBEiJ_T0069934.1 MGP_WSBEiJ_G0028648.1 mouse_genomes_project 5 32094443 32115482 - MGP_WSBEiJ_P0069934 Haus3 protein_coding protein_coding MGP_WSBEiJ_T0069935.1 MGP_WSBEiJ_G0028648.1 mouse_genomes_project 5 32109186 32115403 - Haus3 protein_coding retained_intron MGP_WSBEiJ_T0069936.1 MGP_WSBEiJ_G0028648.1 mouse_genomes_project 5 32109423 32110034 - Haus3 protein_coding processed_transcript MGP_WSBEiJ_T0069937.1 MGP_WSBEiJ_G0028648.1 mouse_genomes_project 5 32113887 32115407 - Haus3 protein_coding processed_transcript MGP_WSBEiJ_T0069938.1 MGP_WSBEiJ_G0028648.1 mouse_genomes_project 5 32113979 32115458 - MGP_WSBEiJ_P0069938 Haus3 protein_coding protein_coding MGP_WSBEiJ_T0069939.1 MGP_WSBEiJ_G0028648.1 mouse_genomes_project 5 32114192 32115388 - MGP_WSBEiJ_P0069939 Haus3 protein_coding protein_coding MGP_WSBEiJ_T0072214.1 MGP_WSBEiJ_G0029095.1 mouse_genomes_project 5 114697522 114786070 - MGP_WSBEiJ_P0072214 2900026A02Rik protein_coding protein_coding MGP_WSBEiJ_T0072215.1 MGP_WSBEiJ_G0029095.1 mouse_genomes_project 5 114699967 114754782 - MGP_WSBEiJ_P0072215 2900026A02Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0010515.1 MGP_WSBEiJ_G0008672.1 mouse_genomes_project 5 65135745 65135819 + Gm25952 miRNA miRNA MGP_WSBEiJ_T0004744.1 MGP_WSBEiJ_G0004087.1 mouse_genomes_project 5 125612848 125620715 - Gm2479 antisense antisense MGP_WSBEiJ_T0004745.1 MGP_WSBEiJ_G0004087.1 mouse_genomes_project 5 125613013 125618513 - Gm2479 antisense antisense MGP_WSBEiJ_T0070501.1 MGP_WSBEiJ_G0028740.1 mouse_genomes_project 5 51487369 51512167 + MGP_WSBEiJ_P0070501 Slc34a2 protein_coding protein_coding MGP_WSBEiJ_T0070502.1 MGP_WSBEiJ_G0028740.1 mouse_genomes_project 5 51499959 51524104 + MGP_WSBEiJ_P0070502 Slc34a2 protein_coding protein_coding MGP_WSBEiJ_T0070503.1 MGP_WSBEiJ_G0028740.1 mouse_genomes_project 5 51499960 51518224 + Slc34a2 protein_coding retained_intron MGP_WSBEiJ_T0008260.1 MGP_WSBEiJ_G0006710.1 mouse_genomes_project 5 131338489 131339370 + Gm42500 lincRNA lincRNA MGP_WSBEiJ_T0069410.1 MGP_WSBEiJ_G0028565.1 mouse_genomes_project 5 27178436 27183865 - MGP_WSBEiJ_P0069410 Mnx1 protein_coding protein_coding MGP_WSBEiJ_T0069411.1 MGP_WSBEiJ_G0028565.1 mouse_genomes_project 5 27178663 27183865 - MGP_WSBEiJ_P0069411 Mnx1 protein_coding protein_coding MGP_WSBEiJ_T0069130.1 MGP_WSBEiJ_G0028511.1 mouse_genomes_project 5 19139927 19167584 - MGP_WSBEiJ_P0069130 Dnajc2 protein_coding protein_coding MGP_WSBEiJ_T0069131.1 MGP_WSBEiJ_G0028511.1 mouse_genomes_project 5 19139929 19167452 - MGP_WSBEiJ_P0069131 Dnajc2 protein_coding protein_coding MGP_WSBEiJ_T0069132.1 MGP_WSBEiJ_G0028511.1 mouse_genomes_project 5 19139936 19167570 - Dnajc2 protein_coding retained_intron MGP_WSBEiJ_T0069133.1 MGP_WSBEiJ_G0028511.1 mouse_genomes_project 5 19149101 19151083 - Dnajc2 protein_coding retained_intron MGP_WSBEiJ_T0069134.1 MGP_WSBEiJ_G0028511.1 mouse_genomes_project 5 19155911 19167554 - Dnajc2 protein_coding retained_intron MGP_WSBEiJ_T0069135.1 MGP_WSBEiJ_G0028511.1 mouse_genomes_project 5 19156896 19167585 - MGP_WSBEiJ_P0069135 Dnajc2 protein_coding protein_coding MGP_WSBEiJ_T0073308.1 MGP_WSBEiJ_G0029288.1 mouse_genomes_project 5 128181015 128182125 - MGP_WSBEiJ_P0073308 Dhx37 protein_coding protein_coding MGP_WSBEiJ_T0073309.1 MGP_WSBEiJ_G0029288.1 mouse_genomes_project 5 128181308 128200118 - MGP_WSBEiJ_P0073309 Dhx37 protein_coding protein_coding MGP_WSBEiJ_T0073310.1 MGP_WSBEiJ_G0029288.1 mouse_genomes_project 5 128182527 128185077 - Dhx37 protein_coding retained_intron MGP_WSBEiJ_T0073311.1 MGP_WSBEiJ_G0029288.1 mouse_genomes_project 5 128189790 128192952 - MGP_WSBEiJ_P0073311 Dhx37 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001845.1 MGP_WSBEiJ_G0001765.1 mouse_genomes_project 5 140883622 140884571 + TEC TEC MGP_WSBEiJ_T0073147.1 MGP_WSBEiJ_G0029264.1 mouse_genomes_project 5 126771715 126809069 - MGP_WSBEiJ_P0073147 Abcb9 protein_coding protein_coding MGP_WSBEiJ_T0073148.1 MGP_WSBEiJ_G0029264.1 mouse_genomes_project 5 126772608 126792631 - Abcb9 protein_coding retained_intron MGP_WSBEiJ_T0073149.1 MGP_WSBEiJ_G0029264.1 mouse_genomes_project 5 126783469 126803542 - MGP_WSBEiJ_P0073149 Abcb9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073150.1 MGP_WSBEiJ_G0029264.1 mouse_genomes_project 5 126783473 126803542 - MGP_WSBEiJ_P0073150 Abcb9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073151.1 MGP_WSBEiJ_G0029264.1 mouse_genomes_project 5 126789624 126793332 - Abcb9 protein_coding processed_transcript MGP_WSBEiJ_T0073152.1 MGP_WSBEiJ_G0029264.1 mouse_genomes_project 5 126801251 126809057 - Abcb9 protein_coding retained_intron MGP_WSBEiJ_T0099627.1 MGP_WSBEiJ_G0038290.1 mouse_genomes_project 5 151565884 151566014 - Gm24556 snoRNA snoRNA MGP_WSBEiJ_T0008103.1 MGP_WSBEiJ_G0006610.1 mouse_genomes_project 5 102513536 102520413 - Gm43271 lincRNA lincRNA MGP_WSBEiJ_T0004606.1 MGP_WSBEiJ_G0003986.1 mouse_genomes_project 5 42436727 42453635 + Gm42984 antisense antisense MGP_WSBEiJ_T0014644.1 MGP_WSBEiJ_G0012774.1 mouse_genomes_project 5 102992341 102993114 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069924.1 MGP_WSBEiJ_G0028646.1 mouse_genomes_project 5 31935697 31945629 + MGP_WSBEiJ_P0069924 Nat8l protein_coding protein_coding MGP_WSBEiJ_T0069925.1 MGP_WSBEiJ_G0028646.1 mouse_genomes_project 5 31939476 31940557 + Nat8l protein_coding processed_transcript MGP_WSBEiJ_T0001570.1 MGP_WSBEiJ_G0001494.1 mouse_genomes_project 5 56671482 56672949 + TEC TEC MGP_WSBEiJ_T0004585.1 MGP_WSBEiJ_G0003970.1 mouse_genomes_project 5 32170145 32176233 + Gm42848 antisense antisense MGP_WSBEiJ_T0070694.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65170511 65258704 - MGP_WSBEiJ_P0070694 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070695.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65170511 65341017 - MGP_WSBEiJ_P0070695 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070696.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65170518 65235283 - MGP_WSBEiJ_P0070696 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070697.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65170519 65319549 - MGP_WSBEiJ_P0070697 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070698.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65172560 65318703 - MGP_WSBEiJ_P0070698 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070699.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65172560 65318703 - MGP_WSBEiJ_P0070699 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070700.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65172940 65235382 - MGP_WSBEiJ_P0070700 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070701.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65179468 65318581 - Rbm47 protein_coding retained_intron MGP_WSBEiJ_T0070702.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65180682 65209275 - MGP_WSBEiJ_P0070702 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070703.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65180925 65236273 - Rbm47 protein_coding processed_transcript MGP_WSBEiJ_T0070704.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65181117 65235267 - MGP_WSBEiJ_P0070704 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070705.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65181137 65318948 - MGP_WSBEiJ_P0070705 Rbm47 protein_coding protein_coding MGP_WSBEiJ_T0070706.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65200960 65319413 - Rbm47 protein_coding processed_transcript MGP_WSBEiJ_T0070707.1 MGP_WSBEiJ_G0028775.1 mouse_genomes_project 5 65201075 65319407 - Rbm47 protein_coding processed_transcript MGP_WSBEiJ_T0072069.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111798766 111857388 - MGP_WSBEiJ_P0072069 Fbrsl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072070.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111798773 111887700 - MGP_WSBEiJ_P0072070 Fbrsl1 protein_coding protein_coding MGP_WSBEiJ_T0072071.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111799806 111824195 - MGP_WSBEiJ_P0072071 Fbrsl1 protein_coding protein_coding MGP_WSBEiJ_T0072072.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111799810 111887683 - MGP_WSBEiJ_P0072072 Fbrsl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072073.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111799919 111824061 - MGP_WSBEiJ_P0072073 Fbrsl1 protein_coding protein_coding MGP_WSBEiJ_T0072074.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111816007 111872404 - MGP_WSBEiJ_P0072074 Fbrsl1 protein_coding protein_coding MGP_WSBEiJ_T0072075.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111869264 111871252 - Fbrsl1 protein_coding processed_transcript MGP_WSBEiJ_T0072076.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111871384 111872711 - Fbrsl1 protein_coding processed_transcript MGP_WSBEiJ_T0072077.1 MGP_WSBEiJ_G0029068.1 mouse_genomes_project 5 111871384 111887700 - MGP_WSBEiJ_P0072077 Fbrsl1 protein_coding protein_coding MGP_WSBEiJ_T0014695.1 MGP_WSBEiJ_G0012825.1 mouse_genomes_project 5 119309210 119309588 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073485.1 MGP_WSBEiJ_G0029324.1 mouse_genomes_project 5 133432086 133438633 - A330070K13Rik protein_coding antisense MGP_WSBEiJ_T0073486.1 MGP_WSBEiJ_G0029324.1 mouse_genomes_project 5 133432159 133438634 - MGP_WSBEiJ_P0073486 A330070K13Rik protein_coding protein_coding MGP_WSBEiJ_T0014557.1 MGP_WSBEiJ_G0012687.1 mouse_genomes_project 5 59468084 59468506 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004678.1 MGP_WSBEiJ_G0004038.1 mouse_genomes_project 5 103292615 103303573 - 1700013M08Rik antisense antisense MGP_WSBEiJ_T0004679.1 MGP_WSBEiJ_G0004038.1 mouse_genomes_project 5 103299490 103300288 - 1700013M08Rik antisense antisense MGP_WSBEiJ_T0070190.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35301645 35330129 + MGP_WSBEiJ_P0070190 Crmp1 protein_coding protein_coding MGP_WSBEiJ_T0070191.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35301785 35355360 + MGP_WSBEiJ_P0070191 Crmp1 protein_coding protein_coding MGP_WSBEiJ_T0070192.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35302439 35339521 + MGP_WSBEiJ_P0070192 Crmp1 protein_coding protein_coding MGP_WSBEiJ_T0070193.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35305469 35355328 + MGP_WSBEiJ_P0070193 Crmp1 protein_coding protein_coding MGP_WSBEiJ_T0070194.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35305550 35326890 + Crmp1 protein_coding retained_intron MGP_WSBEiJ_T0070195.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35306942 35340256 + MGP_WSBEiJ_P0070195 Crmp1 protein_coding protein_coding MGP_WSBEiJ_T0070196.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35330084 35338110 + Crmp1 protein_coding retained_intron MGP_WSBEiJ_T0070197.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35341135 35344559 + Crmp1 protein_coding retained_intron MGP_WSBEiJ_T0070198.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35341795 35344067 + Crmp1 protein_coding retained_intron MGP_WSBEiJ_T0070199.1 MGP_WSBEiJ_G0028688.1 mouse_genomes_project 5 35345260 35349889 + Crmp1 protein_coding retained_intron MGP_WSBEiJ_T0070290.1 MGP_WSBEiJ_G0028705.1 mouse_genomes_project 5 37762284 37908425 - MGP_WSBEiJ_P0070290 Hs3st1 protein_coding protein_coding MGP_WSBEiJ_T0070291.1 MGP_WSBEiJ_G0028705.1 mouse_genomes_project 5 37762288 37793891 - MGP_WSBEiJ_P0070291 Hs3st1 protein_coding protein_coding MGP_WSBEiJ_T0070292.1 MGP_WSBEiJ_G0028705.1 mouse_genomes_project 5 37763118 37794503 - MGP_WSBEiJ_P0070292 Hs3st1 protein_coding protein_coding MGP_WSBEiJ_T0070293.1 MGP_WSBEiJ_G0028705.1 mouse_genomes_project 5 37763423 37793854 - MGP_WSBEiJ_P0070293 Hs3st1 protein_coding protein_coding MGP_WSBEiJ_T0004600.1 MGP_WSBEiJ_G0003982.1 mouse_genomes_project 5 41724486 41732322 - Gm15866 antisense antisense MGP_WSBEiJ_T0004601.1 MGP_WSBEiJ_G0003982.1 mouse_genomes_project 5 41731837 41781211 - Gm15866 antisense antisense MGP_WSBEiJ_T0014595.1 MGP_WSBEiJ_G0012725.1 mouse_genomes_project 5 75977210 75978284 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004786.1 MGP_WSBEiJ_G0004118.1 mouse_genomes_project 5 141858459 141861078 + 6330418K02Rik antisense antisense MGP_WSBEiJ_T0004787.1 MGP_WSBEiJ_G0004118.1 mouse_genomes_project 5 141858470 141860749 + 6330418K02Rik antisense antisense MGP_WSBEiJ_T0004788.1 MGP_WSBEiJ_G0004118.1 mouse_genomes_project 5 141858485 141861078 + 6330418K02Rik antisense antisense MGP_WSBEiJ_T0004789.1 MGP_WSBEiJ_G0004118.1 mouse_genomes_project 5 141858524 141860646 + 6330418K02Rik antisense antisense MGP_WSBEiJ_T0004790.1 MGP_WSBEiJ_G0004118.1 mouse_genomes_project 5 141859960 141860500 + 6330418K02Rik antisense antisense MGP_WSBEiJ_T0001411.1 MGP_WSBEiJ_G0001339.1 mouse_genomes_project 5 10484601 10488507 + TEC TEC MGP_WSBEiJ_T0072878.1 MGP_WSBEiJ_G0029222.1 mouse_genomes_project 5 124786874 124814441 - MGP_WSBEiJ_P0072878 Tctn1 protein_coding protein_coding MGP_WSBEiJ_T0072879.1 MGP_WSBEiJ_G0029222.1 mouse_genomes_project 5 124791272 124814441 - MGP_WSBEiJ_P0072879 Tctn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072880.1 MGP_WSBEiJ_G0029222.1 mouse_genomes_project 5 124795556 124801671 - Tctn1 protein_coding processed_transcript MGP_WSBEiJ_T0072881.1 MGP_WSBEiJ_G0029222.1 mouse_genomes_project 5 124798425 124804551 - Tctn1 protein_coding retained_intron MGP_WSBEiJ_T0072882.1 MGP_WSBEiJ_G0029222.1 mouse_genomes_project 5 124802317 124814396 - Tctn1 protein_coding retained_intron MGP_WSBEiJ_T0017606.1 MGP_WSBEiJ_G0015037.1 mouse_genomes_project 5 153454713 153462503 - 1810059H22Rik processed_transcript lincRNA MGP_WSBEiJ_T0017607.1 MGP_WSBEiJ_G0015037.1 mouse_genomes_project 5 153455609 153457462 - 1810059H22Rik processed_transcript retained_intron MGP_WSBEiJ_T0017608.1 MGP_WSBEiJ_G0015037.1 mouse_genomes_project 5 153460894 153461997 - 1810059H22Rik processed_transcript lincRNA MGP_WSBEiJ_T0017609.1 MGP_WSBEiJ_G0015037.1 mouse_genomes_project 5 153460966 153475728 - 1810059H22Rik processed_transcript lincRNA MGP_WSBEiJ_T0017610.1 MGP_WSBEiJ_G0015037.1 mouse_genomes_project 5 153461185 153461973 - 1810059H22Rik processed_transcript retained_intron MGP_WSBEiJ_T0017611.1 MGP_WSBEiJ_G0015037.1 mouse_genomes_project 5 153461428 153468180 - 1810059H22Rik processed_transcript retained_intron MGP_WSBEiJ_T0017612.1 MGP_WSBEiJ_G0015037.1 mouse_genomes_project 5 153467847 153475742 - 1810059H22Rik processed_transcript lincRNA MGP_WSBEiJ_T0017613.1 MGP_WSBEiJ_G0015037.1 mouse_genomes_project 5 153468666 153475968 - 1810059H22Rik processed_transcript lincRNA MGP_WSBEiJ_T0014526.1 MGP_WSBEiJ_G0012656.1 mouse_genomes_project 5 45957110 45957915 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073475.1 MGP_WSBEiJ_G0029321.1 mouse_genomes_project 5 133289765 133301914 - MGP_WSBEiJ_P0073475 Sbds protein_coding protein_coding MGP_WSBEiJ_T0073476.1 MGP_WSBEiJ_G0029321.1 mouse_genomes_project 5 133290439 133301789 - MGP_WSBEiJ_P0073476 Sbds protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073477.1 MGP_WSBEiJ_G0029321.1 mouse_genomes_project 5 133291922 133300450 - MGP_WSBEiJ_P0073477 Sbds protein_coding protein_coding MGP_WSBEiJ_T0073478.1 MGP_WSBEiJ_G0029321.1 mouse_genomes_project 5 133292469 133301876 - Sbds protein_coding processed_transcript MGP_WSBEiJ_T0073479.1 MGP_WSBEiJ_G0029321.1 mouse_genomes_project 5 133295707 133301862 - Sbds protein_coding processed_transcript MGP_WSBEiJ_T0010561.1 MGP_WSBEiJ_G0008718.1 mouse_genomes_project 5 142301610 142301693 + Gm24082 miRNA miRNA MGP_WSBEiJ_T0014467.1 MGP_WSBEiJ_G0012597.1 mouse_genomes_project 5 20844499 20845124 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001637.1 MGP_WSBEiJ_G0001560.1 mouse_genomes_project 5 68813416 68813738 - TEC TEC MGP_WSBEiJ_T0010569.1 MGP_WSBEiJ_G0008726.1 mouse_genomes_project 5 151661561 151661671 - Mir7k miRNA miRNA MGP_WSBEiJ_T0008283.1 MGP_WSBEiJ_G0006723.1 mouse_genomes_project 5 140725780 140732539 + Gm42562 lincRNA lincRNA MGP_WSBEiJ_T0014771.1 MGP_WSBEiJ_G0012901.1 mouse_genomes_project 5 155134294 155135930 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097217.1 MGP_WSBEiJ_G0035898.1 mouse_genomes_project 5 1894138 1894265 - Gm22897 scaRNA scaRNA MGP_WSBEiJ_T0001862.1 MGP_WSBEiJ_G0001782.1 mouse_genomes_project 5 152662330 152663015 + TEC TEC MGP_WSBEiJ_T0073713.1 MGP_WSBEiJ_G0029359.1 mouse_genomes_project 5 138762699 138782883 - MGP_WSBEiJ_P0073713 Pom121 protein_coding protein_coding MGP_WSBEiJ_T0001863.1 MGP_WSBEiJ_G0001783.1 mouse_genomes_project 5 153021670 153022316 - TEC TEC MGP_WSBEiJ_T0017618.1 MGP_WSBEiJ_G0015040.1 mouse_genomes_project 5 154424901 154441449 + 4930500F04Rik processed_transcript lincRNA MGP_WSBEiJ_T0017619.1 MGP_WSBEiJ_G0015040.1 mouse_genomes_project 5 154425119 154441445 + 4930500F04Rik processed_transcript lincRNA MGP_WSBEiJ_T0017620.1 MGP_WSBEiJ_G0015040.1 mouse_genomes_project 5 154429447 154431554 + 4930500F04Rik processed_transcript retained_intron MGP_WSBEiJ_T0074776.1 MGP_WSBEiJ_G0029575.1 mouse_genomes_project 5 153713017 153744499 + MGP_WSBEiJ_P0074776 Uspl1 protein_coding protein_coding MGP_WSBEiJ_T0074777.1 MGP_WSBEiJ_G0029575.1 mouse_genomes_project 5 153713028 153722678 + MGP_WSBEiJ_P0074777 Uspl1 protein_coding protein_coding MGP_WSBEiJ_T0074778.1 MGP_WSBEiJ_G0029575.1 mouse_genomes_project 5 153713028 153744499 + MGP_WSBEiJ_P0074778 Uspl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074779.1 MGP_WSBEiJ_G0029575.1 mouse_genomes_project 5 153713131 153722445 + Uspl1 protein_coding processed_transcript MGP_WSBEiJ_T0074780.1 MGP_WSBEiJ_G0029575.1 mouse_genomes_project 5 153714603 153717355 + Uspl1 protein_coding retained_intron MGP_WSBEiJ_T0074781.1 MGP_WSBEiJ_G0029575.1 mouse_genomes_project 5 153716125 153744330 + MGP_WSBEiJ_P0074781 Uspl1 protein_coding protein_coding MGP_WSBEiJ_T0074782.1 MGP_WSBEiJ_G0029575.1 mouse_genomes_project 5 153717209 153718491 + Uspl1 protein_coding retained_intron MGP_WSBEiJ_T0074783.1 MGP_WSBEiJ_G0029575.1 mouse_genomes_project 5 153719686 153744503 + Uspl1 protein_coding retained_intron MGP_WSBEiJ_T0001428.1 MGP_WSBEiJ_G0001356.1 mouse_genomes_project 5 16465387 16468510 - TEC TEC MGP_WSBEiJ_T0011414.1 MGP_WSBEiJ_G0009571.1 mouse_genomes_project 5 137460799 137461087 + Gm24139 misc_RNA misc_RNA MGP_WSBEiJ_T0014708.1 MGP_WSBEiJ_G0012838.1 mouse_genomes_project 5 127218728 127219092 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008206.1 MGP_WSBEiJ_G0006677.1 mouse_genomes_project 5 121684573 121695345 - Gm31314 lincRNA lincRNA MGP_WSBEiJ_T0008082.1 MGP_WSBEiJ_G0006596.1 mouse_genomes_project 5 97898122 97922306 + Gm33969 lincRNA lincRNA MGP_WSBEiJ_T0072282.1 MGP_WSBEiJ_G0029109.1 mouse_genomes_project 5 115740455 115808879 - MGP_WSBEiJ_P0072282 Svop protein_coding protein_coding MGP_WSBEiJ_T0072283.1 MGP_WSBEiJ_G0029109.1 mouse_genomes_project 5 115741669 115779949 - Svop protein_coding processed_transcript MGP_WSBEiJ_T0072284.1 MGP_WSBEiJ_G0029109.1 mouse_genomes_project 5 115749832 115757658 - Svop protein_coding retained_intron MGP_WSBEiJ_T0072285.1 MGP_WSBEiJ_G0029109.1 mouse_genomes_project 5 115768568 115808689 - Svop protein_coding retained_intron MGP_WSBEiJ_T0072286.1 MGP_WSBEiJ_G0029109.1 mouse_genomes_project 5 115769335 115808676 - MGP_WSBEiJ_P0072286 Svop protein_coding protein_coding MGP_WSBEiJ_T0008061.1 MGP_WSBEiJ_G0006575.1 mouse_genomes_project 5 84358333 84362759 + Gm43532 lincRNA lincRNA MGP_WSBEiJ_T0017576.1 MGP_WSBEiJ_G0015027.1 mouse_genomes_project 5 90864659 90901755 - Gm43448 processed_transcript processed_transcript MGP_WSBEiJ_T0017577.1 MGP_WSBEiJ_G0015027.1 mouse_genomes_project 5 90882543 90901775 - Gm43448 processed_transcript processed_transcript MGP_WSBEiJ_T0004692.1 MGP_WSBEiJ_G0004049.1 mouse_genomes_project 5 111680008 111693203 + Gm15788 antisense antisense MGP_WSBEiJ_T0071469.1 MGP_WSBEiJ_G0028941.1 mouse_genomes_project 5 92955837 92995266 + MGP_WSBEiJ_P0071469 Fam47e protein_coding protein_coding MGP_WSBEiJ_T0071470.1 MGP_WSBEiJ_G0028941.1 mouse_genomes_project 5 92955870 92995166 + MGP_WSBEiJ_P0071470 Fam47e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071471.1 MGP_WSBEiJ_G0028941.1 mouse_genomes_project 5 92972604 92995388 + MGP_WSBEiJ_P0071471 Fam47e protein_coding protein_coding MGP_WSBEiJ_T0071472.1 MGP_WSBEiJ_G0028941.1 mouse_genomes_project 5 92972670 92989881 + MGP_WSBEiJ_P0071472 Fam47e protein_coding protein_coding MGP_WSBEiJ_T0071473.1 MGP_WSBEiJ_G0028941.1 mouse_genomes_project 5 92972683 92995237 + MGP_WSBEiJ_P0071473 Fam47e protein_coding protein_coding MGP_WSBEiJ_T0071474.1 MGP_WSBEiJ_G0028941.1 mouse_genomes_project 5 92972799 92995120 + MGP_WSBEiJ_P0071474 Fam47e protein_coding protein_coding MGP_WSBEiJ_T0074523.1 MGP_WSBEiJ_G0029521.1 mouse_genomes_project 5 148251456 148255577 + MGP_WSBEiJ_P0074523 Bhlha15 protein_coding protein_coding MGP_WSBEiJ_T0008152.1 MGP_WSBEiJ_G0006641.1 mouse_genomes_project 5 113097686 113098355 + Gm42489 lincRNA lincRNA MGP_WSBEiJ_T0001647.1 MGP_WSBEiJ_G0001569.1 mouse_genomes_project 5 72682321 72683314 + TEC TEC MGP_WSBEiJ_T0004640.1 MGP_WSBEiJ_G0004014.1 mouse_genomes_project 5 75814319 75814971 + Gm7467 antisense antisense MGP_WSBEiJ_T0073470.1 MGP_WSBEiJ_G0029320.1 mouse_genomes_project 5 133259405 133272709 + MGP_WSBEiJ_P0073470 Tmem248 protein_coding protein_coding MGP_WSBEiJ_T0073471.1 MGP_WSBEiJ_G0029320.1 mouse_genomes_project 5 133262068 133275063 + MGP_WSBEiJ_P0073471 Tmem248 protein_coding protein_coding MGP_WSBEiJ_T0073472.1 MGP_WSBEiJ_G0029320.1 mouse_genomes_project 5 133262068 133287800 + MGP_WSBEiJ_P0073472 Tmem248 protein_coding protein_coding MGP_WSBEiJ_T0073473.1 MGP_WSBEiJ_G0029320.1 mouse_genomes_project 5 133262164 133274939 + MGP_WSBEiJ_P0073473 Tmem248 protein_coding protein_coding MGP_WSBEiJ_T0073474.1 MGP_WSBEiJ_G0029320.1 mouse_genomes_project 5 133264659 133287701 + MGP_WSBEiJ_P0073474 Tmem248 protein_coding protein_coding MGP_WSBEiJ_T0008128.1 MGP_WSBEiJ_G0006628.1 mouse_genomes_project 5 108121241 108128422 + Gm43419 lincRNA lincRNA MGP_WSBEiJ_T0014468.1 MGP_WSBEiJ_G0012598.1 mouse_genomes_project 5 21614699 21615184 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008210.1 MGP_WSBEiJ_G0006681.1 mouse_genomes_project 5 122004013 122006544 - 1700021F13Rik lincRNA lincRNA MGP_WSBEiJ_T0008211.1 MGP_WSBEiJ_G0006681.1 mouse_genomes_project 5 122004017 122006342 - 1700021F13Rik lincRNA lincRNA MGP_WSBEiJ_T0014570.1 MGP_WSBEiJ_G0012700.1 mouse_genomes_project 5 63215161 63216124 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074298.1 MGP_WSBEiJ_G0029470.1 mouse_genomes_project 5 143705901 143780639 + MGP_WSBEiJ_P0074298 Elfn1 protein_coding protein_coding MGP_WSBEiJ_T0074299.1 MGP_WSBEiJ_G0029470.1 mouse_genomes_project 5 143706432 143776957 + Elfn1 protein_coding processed_transcript MGP_WSBEiJ_T0008120.1 MGP_WSBEiJ_G0006621.1 mouse_genomes_project 5 107364948 107366851 + Gm32921 lincRNA lincRNA MGP_WSBEiJ_T0010554.1 MGP_WSBEiJ_G0008711.1 mouse_genomes_project 5 140526157 140526266 + Mir702 miRNA miRNA MGP_WSBEiJ_T0071746.1 MGP_WSBEiJ_G0028999.1 mouse_genomes_project 5 105092013 105105666 + MGP_WSBEiJ_P0071746 Dmp1 protein_coding protein_coding MGP_WSBEiJ_T0014578.1 MGP_WSBEiJ_G0012708.1 mouse_genomes_project 5 67508966 67509291 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071105.1 MGP_WSBEiJ_G0028846.1 mouse_genomes_project 5 76905702 76947632 + MGP_WSBEiJ_P0071105 Polr2b protein_coding protein_coding MGP_WSBEiJ_T0071106.1 MGP_WSBEiJ_G0028846.1 mouse_genomes_project 5 76906045 76910598 + Polr2b protein_coding retained_intron MGP_WSBEiJ_T0071107.1 MGP_WSBEiJ_G0028846.1 mouse_genomes_project 5 76924002 76925218 + Polr2b protein_coding retained_intron MGP_WSBEiJ_T0071108.1 MGP_WSBEiJ_G0028846.1 mouse_genomes_project 5 76938664 76941319 + Polr2b protein_coding retained_intron MGP_WSBEiJ_T0071149.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 83953402 84343122 - MGP_WSBEiJ_P0071149 Epha5 protein_coding protein_coding MGP_WSBEiJ_T0071150.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 83956431 84343007 - MGP_WSBEiJ_P0071150 Epha5 protein_coding protein_coding MGP_WSBEiJ_T0071151.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 83956431 84343007 - MGP_WSBEiJ_P0071151 Epha5 protein_coding protein_coding MGP_WSBEiJ_T0071152.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 83964309 84343560 - MGP_WSBEiJ_P0071152 Epha5 protein_coding protein_coding MGP_WSBEiJ_T0071153.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 83964309 84343007 - MGP_WSBEiJ_P0071153 Epha5 protein_coding protein_coding MGP_WSBEiJ_T0071154.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 83964309 84343007 - MGP_WSBEiJ_P0071154 Epha5 protein_coding protein_coding MGP_WSBEiJ_T0071155.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 84010841 84343122 - Epha5 protein_coding retained_intron MGP_WSBEiJ_T0071156.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 84062357 84343122 - Epha5 protein_coding retained_intron MGP_WSBEiJ_T0071157.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 84150788 84343583 - Epha5 protein_coding retained_intron MGP_WSBEiJ_T0071158.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 84255180 84343583 - Epha5 protein_coding retained_intron MGP_WSBEiJ_T0071159.1 MGP_WSBEiJ_G0028851.1 mouse_genomes_project 5 84283854 84288496 - Epha5 protein_coding retained_intron MGP_WSBEiJ_T0069093.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18526534 18602064 + Gsap protein_coding retained_intron MGP_WSBEiJ_T0069094.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18526546 18636412 + MGP_WSBEiJ_P0069094 Gsap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069095.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18526568 18636434 + MGP_WSBEiJ_P0069095 Gsap protein_coding protein_coding MGP_WSBEiJ_T0069096.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18526578 18530514 + Gsap protein_coding processed_transcript MGP_WSBEiJ_T0069097.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18526591 18594115 + MGP_WSBEiJ_P0069097 Gsap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069098.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18526592 18633338 + MGP_WSBEiJ_P0069098 Gsap protein_coding protein_coding MGP_WSBEiJ_T0069099.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18526592 18633338 + MGP_WSBEiJ_P0069099 Gsap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069100.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18593487 18600619 + Gsap protein_coding retained_intron MGP_WSBEiJ_T0069101.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18634484 18663515 + MGP_WSBEiJ_P0069101 Gsap protein_coding protein_coding MGP_WSBEiJ_T0069102.1 MGP_WSBEiJ_G0028502.1 mouse_genomes_project 5 18634564 18663516 + Gsap protein_coding processed_transcript MGP_WSBEiJ_T0001847.1 MGP_WSBEiJ_G0001767.1 mouse_genomes_project 5 142413946 142414737 + TEC TEC MGP_WSBEiJ_T0004572.1 MGP_WSBEiJ_G0003959.1 mouse_genomes_project 5 25218408 25219733 - Gm16058 antisense antisense MGP_WSBEiJ_T0001489.1 MGP_WSBEiJ_G0001414.1 mouse_genomes_project 5 41977152 41979245 - TEC TEC MGP_WSBEiJ_T0074133.1 MGP_WSBEiJ_G0029437.1 mouse_genomes_project 5 141786311 141787620 + MGP_WSBEiJ_P0074133 Mblac1 protein_coding protein_coding MGP_WSBEiJ_T0014601.1 MGP_WSBEiJ_G0012731.1 mouse_genomes_project 5 79122321 79122339 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073704.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138755795 138764095 + MGP_WSBEiJ_P0073704 Nsun5 protein_coding protein_coding MGP_WSBEiJ_T0073705.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138755812 138757969 + Nsun5 protein_coding processed_transcript MGP_WSBEiJ_T0073706.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138755817 138760767 + MGP_WSBEiJ_P0073706 Nsun5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073707.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138755833 138760628 + MGP_WSBEiJ_P0073707 Nsun5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073708.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138757142 138759107 + Nsun5 protein_coding retained_intron MGP_WSBEiJ_T0073709.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138757492 138760647 + Nsun5 protein_coding retained_intron MGP_WSBEiJ_T0073710.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138757624 138758374 + Nsun5 protein_coding retained_intron MGP_WSBEiJ_T0073711.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138760204 138764102 + Nsun5 protein_coding retained_intron MGP_WSBEiJ_T0073712.1 MGP_WSBEiJ_G0029358.1 mouse_genomes_project 5 138760741 138762702 + Nsun5 protein_coding retained_intron MGP_WSBEiJ_T0014533.1 MGP_WSBEiJ_G0012663.1 mouse_genomes_project 5 48849786 48850528 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071080.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76539232 76569412 + MGP_WSBEiJ_P0071080 Srp72 protein_coding protein_coding MGP_WSBEiJ_T0071081.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76539256 76568291 + MGP_WSBEiJ_P0071081 Srp72 protein_coding protein_coding MGP_WSBEiJ_T0071082.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76539270 76546238 + Srp72 protein_coding retained_intron MGP_WSBEiJ_T0071083.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76546226 76548362 + Srp72 protein_coding retained_intron MGP_WSBEiJ_T0071084.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76549742 76564625 + Srp72 protein_coding retained_intron MGP_WSBEiJ_T0071085.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76563471 76564382 + Srp72 protein_coding retained_intron MGP_WSBEiJ_T0071086.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76564734 76566964 + Srp72 protein_coding retained_intron MGP_WSBEiJ_T0071087.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76566449 76569412 + Srp72 protein_coding retained_intron MGP_WSBEiJ_T0071088.1 MGP_WSBEiJ_G0028839.1 mouse_genomes_project 5 76566879 76567816 + Srp72 protein_coding retained_intron MGP_WSBEiJ_T0010511.1 MGP_WSBEiJ_G0008668.1 mouse_genomes_project 5 63129716 63129794 - Gm23967 miRNA miRNA MGP_WSBEiJ_T0097415.1 MGP_WSBEiJ_G0036089.1 mouse_genomes_project 5 93144218 93145464 + Gm20500 sense_intronic sense_intronic MGP_WSBEiJ_T0001474.1 MGP_WSBEiJ_G0001399.1 mouse_genomes_project 5 34673728 34676283 + TEC TEC MGP_WSBEiJ_T0014665.1 MGP_WSBEiJ_G0012795.1 mouse_genomes_project 5 109284625 109286307 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100858.1 MGP_WSBEiJ_G0039316.1 mouse_genomes_project 5 87220485 87230608 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001678.1 MGP_WSBEiJ_G0001600.1 mouse_genomes_project 5 97343514 97345654 + TEC TEC MGP_WSBEiJ_T0070962.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 73955342 74019734 + MGP_WSBEiJ_P0070962 Fip1l1 protein_coding protein_coding MGP_WSBEiJ_T0070963.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 73955364 74019744 + MGP_WSBEiJ_P0070963 Fip1l1 protein_coding protein_coding MGP_WSBEiJ_T0070964.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 73955372 74013375 + MGP_WSBEiJ_P0070964 Fip1l1 protein_coding protein_coding MGP_WSBEiJ_T0070965.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 73955374 74017090 + MGP_WSBEiJ_P0070965 Fip1l1 protein_coding protein_coding MGP_WSBEiJ_T0070966.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 73955377 73960462 + Fip1l1 protein_coding retained_intron MGP_WSBEiJ_T0070967.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 73955396 74012757 + MGP_WSBEiJ_P0070967 Fip1l1 protein_coding protein_coding MGP_WSBEiJ_T0070968.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 73955577 74006492 + Fip1l1 protein_coding retained_intron MGP_WSBEiJ_T0070969.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 73955872 73965350 + Fip1l1 protein_coding processed_transcript MGP_WSBEiJ_T0070970.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 74005797 74012857 + Fip1l1 protein_coding retained_intron MGP_WSBEiJ_T0070971.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 74005842 74009282 + Fip1l1 protein_coding retained_intron MGP_WSBEiJ_T0070972.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 74007189 74009477 + Fip1l1 protein_coding retained_intron MGP_WSBEiJ_T0070973.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 74007863 74012947 + Fip1l1 protein_coding retained_intron MGP_WSBEiJ_T0070978.1 MGP_WSBEiJ_G0028821.1 mouse_genomes_project 5 74015664 74016875 + Fip1l1 protein_coding retained_intron MGP_WSBEiJ_T0073897.1 MGP_WSBEiJ_G0029391.1 mouse_genomes_project 5 140566906 140573835 + MGP_WSBEiJ_P0073897 Vgf protein_coding protein_coding MGP_WSBEiJ_T0073898.1 MGP_WSBEiJ_G0029391.1 mouse_genomes_project 5 140570778 140573835 + MGP_WSBEiJ_P0073898 Vgf protein_coding protein_coding MGP_WSBEiJ_T0073899.1 MGP_WSBEiJ_G0029391.1 mouse_genomes_project 5 140570847 140573512 + MGP_WSBEiJ_P0073899 Vgf protein_coding protein_coding MGP_WSBEiJ_T0073900.1 MGP_WSBEiJ_G0029391.1 mouse_genomes_project 5 140571184 140571891 + MGP_WSBEiJ_P0073900 Vgf protein_coding protein_coding MGP_WSBEiJ_T0004552.1 MGP_WSBEiJ_G0003942.1 mouse_genomes_project 5 474730 476676 - 4833413G10Rik antisense antisense MGP_WSBEiJ_T0068956.1 MGP_WSBEiJ_G0028478.1 mouse_genomes_project 5 5449786 5587518 - MGP_WSBEiJ_P0068956 Rundc3b protein_coding protein_coding MGP_WSBEiJ_T0068957.1 MGP_WSBEiJ_G0028478.1 mouse_genomes_project 5 5451719 5587518 - MGP_WSBEiJ_P0068957 Rundc3b protein_coding protein_coding MGP_WSBEiJ_T0014754.1 MGP_WSBEiJ_G0012884.1 mouse_genomes_project 5 150273506 150273707 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074542.1 MGP_WSBEiJ_G0029526.1 mouse_genomes_project 5 148839648 148866848 - MGP_WSBEiJ_P0074542 Tmem130 protein_coding protein_coding MGP_WSBEiJ_T0074543.1 MGP_WSBEiJ_G0029526.1 mouse_genomes_project 5 148856352 148867017 - Tmem130 protein_coding processed_transcript MGP_WSBEiJ_T0074572.1 MGP_WSBEiJ_G0029532.1 mouse_genomes_project 5 149222062 149250880 + MGP_WSBEiJ_P0074572 Arpc1a protein_coding protein_coding MGP_WSBEiJ_T0074573.1 MGP_WSBEiJ_G0029532.1 mouse_genomes_project 5 149222116 149237758 + Arpc1a protein_coding processed_transcript MGP_WSBEiJ_T0074574.1 MGP_WSBEiJ_G0029532.1 mouse_genomes_project 5 149222138 149250875 + MGP_WSBEiJ_P0074574 Arpc1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074575.1 MGP_WSBEiJ_G0029532.1 mouse_genomes_project 5 149222331 149238803 + MGP_WSBEiJ_P0074575 Arpc1a protein_coding protein_coding MGP_WSBEiJ_T0074576.1 MGP_WSBEiJ_G0029532.1 mouse_genomes_project 5 149237831 149240453 + Arpc1a protein_coding retained_intron MGP_WSBEiJ_T0074577.1 MGP_WSBEiJ_G0029532.1 mouse_genomes_project 5 149246346 149250711 + Arpc1a protein_coding retained_intron MGP_WSBEiJ_T0017579.1 MGP_WSBEiJ_G0015029.1 mouse_genomes_project 5 108827751 108829689 + A430072P03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017580.1 MGP_WSBEiJ_G0015029.1 mouse_genomes_project 5 108828982 108831386 + A430072P03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0069022.1 MGP_WSBEiJ_G0028489.1 mouse_genomes_project 5 11096388 11339398 + Sema3e protein_coding retained_intron MGP_WSBEiJ_T0069023.1 MGP_WSBEiJ_G0028489.1 mouse_genomes_project 5 11096388 11341789 + MGP_WSBEiJ_P0069023 Sema3e protein_coding protein_coding MGP_WSBEiJ_T0069024.1 MGP_WSBEiJ_G0028489.1 mouse_genomes_project 5 11313693 11315542 + Sema3e protein_coding retained_intron MGP_WSBEiJ_T0070801.1 MGP_WSBEiJ_G0028791.1 mouse_genomes_project 5 68813778 68832308 + MGP_WSBEiJ_P0070801 Guf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070802.1 MGP_WSBEiJ_G0028791.1 mouse_genomes_project 5 68813808 68823642 + Guf1 protein_coding retained_intron MGP_WSBEiJ_T0070803.1 MGP_WSBEiJ_G0028791.1 mouse_genomes_project 5 68813808 68823802 + MGP_WSBEiJ_P0070803 Guf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070804.1 MGP_WSBEiJ_G0028791.1 mouse_genomes_project 5 68813816 68833682 + MGP_WSBEiJ_P0070804 Guf1 protein_coding protein_coding MGP_WSBEiJ_T0070805.1 MGP_WSBEiJ_G0028791.1 mouse_genomes_project 5 68813843 68832309 + MGP_WSBEiJ_P0070805 Guf1 protein_coding protein_coding MGP_WSBEiJ_T0070806.1 MGP_WSBEiJ_G0028791.1 mouse_genomes_project 5 68813928 68824658 + MGP_WSBEiJ_P0070806 Guf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070807.1 MGP_WSBEiJ_G0028791.1 mouse_genomes_project 5 68813949 68832353 + MGP_WSBEiJ_P0070807 Guf1 protein_coding protein_coding MGP_WSBEiJ_T0070808.1 MGP_WSBEiJ_G0028791.1 mouse_genomes_project 5 68823656 68836545 + Guf1 protein_coding retained_intron MGP_WSBEiJ_T0070312.1 MGP_WSBEiJ_G0028711.1 mouse_genomes_project 5 41685003 41799109 + MGP_WSBEiJ_P0070312 C1qtnf7 protein_coding protein_coding MGP_WSBEiJ_T0070313.1 MGP_WSBEiJ_G0028711.1 mouse_genomes_project 5 41685227 41788740 + MGP_WSBEiJ_P0070313 C1qtnf7 protein_coding protein_coding MGP_WSBEiJ_T0070314.1 MGP_WSBEiJ_G0028711.1 mouse_genomes_project 5 41781392 41796911 + MGP_WSBEiJ_P0070314 C1qtnf7 protein_coding protein_coding MGP_WSBEiJ_T0004798.1 MGP_WSBEiJ_G0004124.1 mouse_genomes_project 5 145289652 145297398 - Gm16035 antisense antisense MGP_WSBEiJ_T0100848.1 MGP_WSBEiJ_G0039306.1 mouse_genomes_project 5 12920448 12921481 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001700.1 MGP_WSBEiJ_G0001622.1 mouse_genomes_project 5 105339220 105340484 + TEC TEC MGP_WSBEiJ_T0071760.1 MGP_WSBEiJ_G0029005.1 mouse_genomes_project 5 105800534 105825012 - protein_coding processed_transcript MGP_WSBEiJ_T0074860.1 MGP_WSBEiJ_G0029587.1 mouse_genomes_project 5 155236970 155277529 - N4bp2l2 protein_coding processed_transcript MGP_WSBEiJ_T0074861.1 MGP_WSBEiJ_G0029587.1 mouse_genomes_project 5 155266151 155297544 - MGP_WSBEiJ_P0074861 N4bp2l2 protein_coding protein_coding MGP_WSBEiJ_T0074862.1 MGP_WSBEiJ_G0029587.1 mouse_genomes_project 5 155270915 155278271 - N4bp2l2 protein_coding retained_intron MGP_WSBEiJ_T0074863.1 MGP_WSBEiJ_G0029587.1 mouse_genomes_project 5 155273178 155292270 - MGP_WSBEiJ_P0074863 N4bp2l2 protein_coding protein_coding MGP_WSBEiJ_T0074864.1 MGP_WSBEiJ_G0029587.1 mouse_genomes_project 5 155273191 155277803 - N4bp2l2 protein_coding retained_intron MGP_WSBEiJ_T0074865.1 MGP_WSBEiJ_G0029587.1 mouse_genomes_project 5 155278219 155297509 - N4bp2l2 protein_coding retained_intron MGP_WSBEiJ_T0074866.1 MGP_WSBEiJ_G0029587.1 mouse_genomes_project 5 155293199 155297280 - MGP_WSBEiJ_P0074866 N4bp2l2 protein_coding protein_coding MGP_WSBEiJ_T0074867.1 MGP_WSBEiJ_G0029587.1 mouse_genomes_project 5 155297108 155298115 - N4bp2l2 protein_coding retained_intron MGP_WSBEiJ_T0073611.1 MGP_WSBEiJ_G0029338.1 mouse_genomes_project 5 137933925 137955454 - MGP_WSBEiJ_P0073611 Eif4h protein_coding protein_coding MGP_WSBEiJ_T0073612.1 MGP_WSBEiJ_G0029338.1 mouse_genomes_project 5 137934082 137955311 - MGP_WSBEiJ_P0073612 Eif4h protein_coding protein_coding MGP_WSBEiJ_T0073613.1 MGP_WSBEiJ_G0029338.1 mouse_genomes_project 5 137938082 137955289 - Eif4h protein_coding retained_intron MGP_WSBEiJ_T0073614.1 MGP_WSBEiJ_G0029338.1 mouse_genomes_project 5 137939085 137955266 - Eif4h protein_coding retained_intron MGP_WSBEiJ_T0073615.1 MGP_WSBEiJ_G0029338.1 mouse_genomes_project 5 137953424 137955274 - Eif4h protein_coding retained_intron MGP_WSBEiJ_T0017614.1 MGP_WSBEiJ_G0015038.1 mouse_genomes_project 5 153505517 153527415 - Gm15411 processed_transcript lincRNA MGP_WSBEiJ_T0017615.1 MGP_WSBEiJ_G0015038.1 mouse_genomes_project 5 153509975 153527386 - Gm15411 processed_transcript lincRNA MGP_WSBEiJ_T0017616.1 MGP_WSBEiJ_G0015038.1 mouse_genomes_project 5 153525398 153527415 - Gm15411 processed_transcript retained_intron MGP_WSBEiJ_T0001487.1 MGP_WSBEiJ_G0001412.1 mouse_genomes_project 5 41943957 41945305 - TEC TEC MGP_WSBEiJ_T0014531.1 MGP_WSBEiJ_G0012661.1 mouse_genomes_project 5 47907211 47910067 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001824.1 MGP_WSBEiJ_G0001745.1 mouse_genomes_project 5 135521694 135524000 - TEC TEC MGP_WSBEiJ_T0070256.1 MGP_WSBEiJ_G0028699.1 mouse_genomes_project 5 36358526 36387905 + MGP_WSBEiJ_P0070256 Otop1 protein_coding protein_coding MGP_WSBEiJ_T0070257.1 MGP_WSBEiJ_G0028699.1 mouse_genomes_project 5 36359958 36387913 + Otop1 protein_coding processed_transcript MGP_WSBEiJ_T0070258.1 MGP_WSBEiJ_G0028699.1 mouse_genomes_project 5 36359958 36387904 + MGP_WSBEiJ_P0070258 Otop1 protein_coding protein_coding MGP_WSBEiJ_T0070259.1 MGP_WSBEiJ_G0028699.1 mouse_genomes_project 5 36369667 36387073 + Otop1 protein_coding processed_transcript MGP_WSBEiJ_T0072758.1 MGP_WSBEiJ_G0029204.1 mouse_genomes_project 5 123816838 123840687 - MGP_WSBEiJ_P0072758 Erp29 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072761.1 MGP_WSBEiJ_G0029204.1 mouse_genomes_project 5 123829018 123840706 - MGP_WSBEiJ_P0072761 Erp29 protein_coding protein_coding MGP_WSBEiJ_T0072762.1 MGP_WSBEiJ_G0029204.1 mouse_genomes_project 5 123832954 123840696 - MGP_WSBEiJ_P0072762 Erp29 protein_coding protein_coding MGP_WSBEiJ_T0072763.1 MGP_WSBEiJ_G0029204.1 mouse_genomes_project 5 123833439 123840548 - MGP_WSBEiJ_P0072763 Erp29 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098343.1 MGP_WSBEiJ_G0037006.1 mouse_genomes_project 5 59383597 59383705 - Gm23331 snRNA snRNA MGP_WSBEiJ_T0097216.1 MGP_WSBEiJ_G0035897.1 mouse_genomes_project 5 1894138 1894266 - Gm22897 scaRNA scaRNA MGP_WSBEiJ_T0008324.1 MGP_WSBEiJ_G0006759.1 mouse_genomes_project 5 153641951 153712587 - 5730422E09Rik lincRNA lincRNA MGP_WSBEiJ_T0008325.1 MGP_WSBEiJ_G0006759.1 mouse_genomes_project 5 153641955 153645796 - 5730422E09Rik lincRNA lincRNA MGP_WSBEiJ_T0072047.1 MGP_WSBEiJ_G0029064.1 mouse_genomes_project 5 111690221 111702870 - MGP_WSBEiJ_P0072047 Pxmp2 protein_coding protein_coding MGP_WSBEiJ_T0072048.1 MGP_WSBEiJ_G0029064.1 mouse_genomes_project 5 111690234 111702705 - MGP_WSBEiJ_P0072048 Pxmp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072049.1 MGP_WSBEiJ_G0029064.1 mouse_genomes_project 5 111697477 111702686 - Pxmp2 protein_coding processed_transcript MGP_WSBEiJ_T0072050.1 MGP_WSBEiJ_G0029064.1 mouse_genomes_project 5 111700199 111702803 - Pxmp2 protein_coding retained_intron MGP_WSBEiJ_T0074784.1 MGP_WSBEiJ_G0029576.1 mouse_genomes_project 5 153795855 153820696 + MGP_WSBEiJ_P0074784 Alox5ap protein_coding protein_coding MGP_WSBEiJ_T0074785.1 MGP_WSBEiJ_G0029576.1 mouse_genomes_project 5 153810863 153820712 + MGP_WSBEiJ_P0074785 Alox5ap protein_coding protein_coding MGP_WSBEiJ_T0074786.1 MGP_WSBEiJ_G0029576.1 mouse_genomes_project 5 153820376 153821006 + Alox5ap protein_coding processed_transcript MGP_WSBEiJ_T0073913.1 MGP_WSBEiJ_G0029396.1 mouse_genomes_project 5 140775590 140779181 - MGP_WSBEiJ_P0073913 Muc3a protein_coding protein_coding MGP_WSBEiJ_T0073914.1 MGP_WSBEiJ_G0029396.1 mouse_genomes_project 5 140775590 140778940 - MGP_WSBEiJ_P0073914 Muc3a protein_coding protein_coding MGP_WSBEiJ_T0073915.1 MGP_WSBEiJ_G0029396.1 mouse_genomes_project 5 140776817 140790902 - MGP_WSBEiJ_P0073915 Muc3a protein_coding unknown_likely_coding MGP_WSBEiJ_T0073916.1 MGP_WSBEiJ_G0029396.1 mouse_genomes_project 5 140776817 140790869 - MGP_WSBEiJ_P0073916 Muc3a protein_coding unknown_likely_coding MGP_WSBEiJ_T0073692.1 MGP_WSBEiJ_G0029354.1 mouse_genomes_project 5 138558279 138617495 + MGP_WSBEiJ_P0073692 Baz1b protein_coding protein_coding MGP_WSBEiJ_T0073693.1 MGP_WSBEiJ_G0029354.1 mouse_genomes_project 5 138569008 138572017 + Baz1b protein_coding retained_intron MGP_WSBEiJ_T0073694.1 MGP_WSBEiJ_G0029354.1 mouse_genomes_project 5 138577462 138583367 + Baz1b protein_coding retained_intron MGP_WSBEiJ_T0073695.1 MGP_WSBEiJ_G0029354.1 mouse_genomes_project 5 138579911 138589408 + Baz1b protein_coding retained_intron MGP_WSBEiJ_T0073696.1 MGP_WSBEiJ_G0029354.1 mouse_genomes_project 5 138613763 138615561 + Baz1b protein_coding retained_intron MGP_WSBEiJ_T0070339.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42198996 42315307 - MGP_WSBEiJ_P0070339 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070340.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42198998 42210250 - MGP_WSBEiJ_P0070340 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070341.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42198998 42312578 - MGP_WSBEiJ_P0070341 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070342.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42198998 42315385 - MGP_WSBEiJ_P0070342 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070343.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42198998 42315034 - MGP_WSBEiJ_P0070343 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070344.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42199001 42308121 - MGP_WSBEiJ_P0070344 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070345.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42199001 42308121 - MGP_WSBEiJ_P0070345 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070346.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42206608 42312545 - MGP_WSBEiJ_P0070346 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070347.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42206772 42308066 - MGP_WSBEiJ_P0070347 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070348.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42206772 42308121 - MGP_WSBEiJ_P0070348 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070349.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42206772 42308066 - MGP_WSBEiJ_P0070349 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070350.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42219914 42243489 - Prom1 protein_coding retained_intron MGP_WSBEiJ_T0070351.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42234850 42255639 - MGP_WSBEiJ_P0070351 Prom1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070352.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42240152 42254697 - Prom1 protein_coding retained_intron MGP_WSBEiJ_T0070353.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42254064 42315311 - Prom1 protein_coding retained_intron MGP_WSBEiJ_T0070354.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42257655 42280059 - Prom1 protein_coding processed_transcript MGP_WSBEiJ_T0070355.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42267712 42312539 - MGP_WSBEiJ_P0070355 Prom1 protein_coding protein_coding MGP_WSBEiJ_T0070356.1 MGP_WSBEiJ_G0028717.1 mouse_genomes_project 5 42313007 42315311 - Prom1 protein_coding processed_transcript MGP_WSBEiJ_T0071561.1 MGP_WSBEiJ_G0028964.1 mouse_genomes_project 5 99505053 99524334 + MGP_WSBEiJ_P0071561 Bmp3 protein_coding protein_coding MGP_WSBEiJ_T0071562.1 MGP_WSBEiJ_G0028964.1 mouse_genomes_project 5 99505077 99535043 + MGP_WSBEiJ_P0071562 Bmp3 protein_coding protein_coding MGP_WSBEiJ_T0071563.1 MGP_WSBEiJ_G0028964.1 mouse_genomes_project 5 99505089 99535043 + MGP_WSBEiJ_P0071563 Bmp3 protein_coding protein_coding MGP_WSBEiJ_T0069428.1 MGP_WSBEiJ_G0028569.1 mouse_genomes_project 5 27763937 27772598 + MGP_WSBEiJ_P0069428 Il6 protein_coding protein_coding MGP_WSBEiJ_T0069429.1 MGP_WSBEiJ_G0028569.1 mouse_genomes_project 5 27763961 27770807 + MGP_WSBEiJ_P0069429 Il6 protein_coding protein_coding MGP_WSBEiJ_T0069430.1 MGP_WSBEiJ_G0028569.1 mouse_genomes_project 5 27763985 27770758 + MGP_WSBEiJ_P0069430 Il6 protein_coding protein_coding MGP_WSBEiJ_T0008036.1 MGP_WSBEiJ_G0006556.1 mouse_genomes_project 5 73503447 73507037 + Dancr lincRNA lincRNA MGP_WSBEiJ_T0008037.1 MGP_WSBEiJ_G0006556.1 mouse_genomes_project 5 73503447 73507036 + Dancr lincRNA lincRNA MGP_WSBEiJ_T0096830.1 MGP_WSBEiJ_G0035511.1 mouse_genomes_project 5 117960226 117960397 - pseudogene pseudogene MGP_WSBEiJ_T0008090.1 MGP_WSBEiJ_G0006601.1 mouse_genomes_project 5 100175194 100177843 + Gm43253 lincRNA lincRNA MGP_WSBEiJ_T0071042.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76204669 76206515 + MGP_WSBEiJ_P0071042 C530008M17Rik protein_coding protein_coding MGP_WSBEiJ_T0071043.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76205842 76402539 + MGP_WSBEiJ_P0071043 C530008M17Rik protein_coding protein_coding MGP_WSBEiJ_T0071044.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76205844 76207268 + C530008M17Rik protein_coding processed_transcript MGP_WSBEiJ_T0071045.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76205880 76346319 + C530008M17Rik protein_coding processed_transcript MGP_WSBEiJ_T0071046.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76305285 76441784 + MGP_WSBEiJ_P0071046 C530008M17Rik protein_coding protein_coding MGP_WSBEiJ_T0071047.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76370739 76404246 + MGP_WSBEiJ_P0071047 C530008M17Rik protein_coding protein_coding MGP_WSBEiJ_T0071048.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76402256 76441999 + MGP_WSBEiJ_P0071048 C530008M17Rik protein_coding protein_coding MGP_WSBEiJ_T0071049.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76402256 76442008 + MGP_WSBEiJ_P0071049 C530008M17Rik protein_coding protein_coding MGP_WSBEiJ_T0071050.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76402276 76404248 + MGP_WSBEiJ_P0071050 C530008M17Rik protein_coding protein_coding MGP_WSBEiJ_T0071051.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76406287 76442010 + MGP_WSBEiJ_P0071051 C530008M17Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0071052.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76426866 76434945 + C530008M17Rik protein_coding retained_intron MGP_WSBEiJ_T0071053.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76434547 76436873 + MGP_WSBEiJ_P0071053 C530008M17Rik protein_coding protein_coding MGP_WSBEiJ_T0071054.1 MGP_WSBEiJ_G0028835.1 mouse_genomes_project 5 76437641 76439125 + C530008M17Rik protein_coding processed_transcript MGP_WSBEiJ_T0008329.1 MGP_WSBEiJ_G0006763.1 mouse_genomes_project 5 153762142 153768781 + 2310047D07Rik lincRNA lincRNA MGP_WSBEiJ_T0008331.1 MGP_WSBEiJ_G0006763.1 mouse_genomes_project 5 153767950 153768763 + 2310047D07Rik lincRNA lincRNA MGP_WSBEiJ_T0010545.1 MGP_WSBEiJ_G0008702.1 mouse_genomes_project 5 127167981 127168061 - Gm27486 miRNA miRNA MGP_WSBEiJ_T0014711.1 MGP_WSBEiJ_G0012841.1 mouse_genomes_project 5 136731735 136732711 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069477.1 MGP_WSBEiJ_G0028579.1 mouse_genomes_project 5 28198905 28213739 + MGP_WSBEiJ_P0069477 1700001C02Rik protein_coding protein_coding MGP_WSBEiJ_T0069478.1 MGP_WSBEiJ_G0028579.1 mouse_genomes_project 5 28198913 28216913 + MGP_WSBEiJ_P0069478 1700001C02Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069479.1 MGP_WSBEiJ_G0028579.1 mouse_genomes_project 5 28198917 28216957 + MGP_WSBEiJ_P0069479 1700001C02Rik protein_coding protein_coding MGP_WSBEiJ_T0069480.1 MGP_WSBEiJ_G0028579.1 mouse_genomes_project 5 28198942 28216936 + MGP_WSBEiJ_P0069480 1700001C02Rik protein_coding protein_coding MGP_WSBEiJ_T0072503.1 MGP_WSBEiJ_G0029152.1 mouse_genomes_project 5 117456221 117462561 + MGP_WSBEiJ_P0072503 Rplp0 protein_coding protein_coding MGP_WSBEiJ_T0072504.1 MGP_WSBEiJ_G0029152.1 mouse_genomes_project 5 117456291 117461389 + MGP_WSBEiJ_P0072504 Rplp0 protein_coding protein_coding MGP_WSBEiJ_T0072505.1 MGP_WSBEiJ_G0029152.1 mouse_genomes_project 5 117456332 117459262 + MGP_WSBEiJ_P0072505 Rplp0 protein_coding protein_coding MGP_WSBEiJ_T0072506.1 MGP_WSBEiJ_G0029152.1 mouse_genomes_project 5 117456377 117459119 + Rplp0 protein_coding retained_intron MGP_WSBEiJ_T0074260.1 MGP_WSBEiJ_G0029460.1 mouse_genomes_project 5 143150982 143161342 + MGP_WSBEiJ_P0074260 C130050O18Rik protein_coding protein_coding MGP_WSBEiJ_T0074261.1 MGP_WSBEiJ_G0029460.1 mouse_genomes_project 5 143152083 143161339 + MGP_WSBEiJ_P0074261 C130050O18Rik protein_coding protein_coding MGP_WSBEiJ_T0074262.1 MGP_WSBEiJ_G0029460.1 mouse_genomes_project 5 143152161 143161344 + MGP_WSBEiJ_P0074262 C130050O18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069858.1 MGP_WSBEiJ_G0028637.1 mouse_genomes_project 5 31544213 31546381 + MGP_WSBEiJ_P0069858 Gm9903 protein_coding protein_coding MGP_WSBEiJ_T0014600.1 MGP_WSBEiJ_G0012730.1 mouse_genomes_project 5 78189022 78189386 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073491.1 MGP_WSBEiJ_G0029325.1 mouse_genomes_project 5 133945096 133947058 - MGP_WSBEiJ_P0073491 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0001690.1 MGP_WSBEiJ_G0001612.1 mouse_genomes_project 5 101657053 101659368 + TEC TEC MGP_WSBEiJ_T0014574.1 MGP_WSBEiJ_G0012704.1 mouse_genomes_project 5 65366063 65369496 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073388.1 MGP_WSBEiJ_G0029304.1 mouse_genomes_project 5 132673445 132688951 - MGP_WSBEiJ_P0073388 Zfp11 protein_coding protein_coding MGP_WSBEiJ_T0008080.1 MGP_WSBEiJ_G0006594.1 mouse_genomes_project 5 97711844 97718644 + Gm43146 lincRNA lincRNA MGP_WSBEiJ_T0071039.1 MGP_WSBEiJ_G0028834.1 mouse_genomes_project 5 76132921 76191956 + Cep135 protein_coding retained_intron MGP_WSBEiJ_T0071040.1 MGP_WSBEiJ_G0028834.1 mouse_genomes_project 5 76132924 76193514 + MGP_WSBEiJ_P0071040 Cep135 protein_coding protein_coding MGP_WSBEiJ_T0071041.1 MGP_WSBEiJ_G0028834.1 mouse_genomes_project 5 76135937 76193513 + MGP_WSBEiJ_P0071041 Cep135 protein_coding protein_coding MGP_WSBEiJ_T0069665.1 MGP_WSBEiJ_G0028608.1 mouse_genomes_project 5 29001748 29002306 - MGP_WSBEiJ_P0069665 Gm9970 protein_coding protein_coding MGP_WSBEiJ_T0007948.1 MGP_WSBEiJ_G0006491.1 mouse_genomes_project 5 26158627 26172968 + Gm26894 lincRNA lincRNA MGP_WSBEiJ_T0004814.1 MGP_WSBEiJ_G0004135.1 mouse_genomes_project 5 153959395 153962715 - Gm43150 antisense antisense MGP_WSBEiJ_T0100866.1 MGP_WSBEiJ_G0039324.1 mouse_genomes_project 5 128630871 128631554 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014637.1 MGP_WSBEiJ_G0012767.1 mouse_genomes_project 5 98762997 98763993 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014498.1 MGP_WSBEiJ_G0012628.1 mouse_genomes_project 5 30392983 30393378 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099622.1 MGP_WSBEiJ_G0038285.1 mouse_genomes_project 5 132838933 132839068 + Gm23245 snoRNA snoRNA MGP_WSBEiJ_T0069984.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32544729 32605652 + MGP_WSBEiJ_P0069984 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069985.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32544830 32578161 + MGP_WSBEiJ_P0069985 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069986.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32544834 32578161 + MGP_WSBEiJ_P0069986 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069987.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32544869 32573893 + Add1 protein_coding processed_transcript MGP_WSBEiJ_T0069988.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32544928 32605649 + MGP_WSBEiJ_P0069988 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069989.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32544938 32605652 + MGP_WSBEiJ_P0069989 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069990.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32545107 32605638 + MGP_WSBEiJ_P0069990 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069991.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32568607 32571380 + Add1 protein_coding retained_intron MGP_WSBEiJ_T0069992.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32573609 32604160 + MGP_WSBEiJ_P0069992 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069993.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32587590 32598663 + MGP_WSBEiJ_P0069993 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069994.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32589969 32593795 + Add1 protein_coding retained_intron MGP_WSBEiJ_T0069995.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32590110 32603975 + MGP_WSBEiJ_P0069995 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069996.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32592697 32605652 + MGP_WSBEiJ_P0069996 Add1 protein_coding protein_coding MGP_WSBEiJ_T0069997.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32593192 32604085 + Add1 protein_coding retained_intron MGP_WSBEiJ_T0069998.1 MGP_WSBEiJ_G0028656.1 mouse_genomes_project 5 32593314 32602087 + Add1 protein_coding retained_intron MGP_WSBEiJ_T0070212.1 MGP_WSBEiJ_G0028691.1 mouse_genomes_project 5 35522032 35788365 - MGP_WSBEiJ_P0070212 Stk32b protein_coding protein_coding MGP_WSBEiJ_T0072237.1 MGP_WSBEiJ_G0029100.1 mouse_genomes_project 5 115366091 115400281 - MGP_WSBEiJ_P0072237 1700069L16Rik protein_coding protein_coding MGP_WSBEiJ_T0072238.1 MGP_WSBEiJ_G0029100.1 mouse_genomes_project 5 115374042 115379338 - 1700069L16Rik protein_coding processed_transcript MGP_WSBEiJ_T0072239.1 MGP_WSBEiJ_G0029100.1 mouse_genomes_project 5 115378587 115400258 - MGP_WSBEiJ_P0072239 1700069L16Rik protein_coding protein_coding MGP_WSBEiJ_T0014484.1 MGP_WSBEiJ_G0012614.1 mouse_genomes_project 5 25676666 25677981 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014598.1 MGP_WSBEiJ_G0012728.1 mouse_genomes_project 5 76916809 76917092 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014418.1 MGP_WSBEiJ_G0012548.1 mouse_genomes_project 5 4386574 4387575 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001550.1 MGP_WSBEiJ_G0001474.1 mouse_genomes_project 5 50266621 50267850 - TEC TEC MGP_WSBEiJ_T0097402.1 MGP_WSBEiJ_G0036076.1 mouse_genomes_project 5 1728669 1730401 - Gm43113 sense_intronic sense_intronic MGP_WSBEiJ_T0072772.1 MGP_WSBEiJ_G0029207.1 mouse_genomes_project 5 123913405 123918403 - MGP_WSBEiJ_P0072772 Adam1a protein_coding protein_coding MGP_WSBEiJ_T0014444.1 MGP_WSBEiJ_G0012574.1 mouse_genomes_project 5 17896893 17897199 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010508.1 MGP_WSBEiJ_G0008665.1 mouse_genomes_project 5 46548971 46549081 + Mir218-1 miRNA miRNA MGP_WSBEiJ_T0004719.1 MGP_WSBEiJ_G0004069.1 mouse_genomes_project 5 119121954 119125438 + 9530046B11Rik antisense antisense MGP_WSBEiJ_T0071209.1 MGP_WSBEiJ_G0028871.1 mouse_genomes_project 5 87532918 87572469 - MGP_WSBEiJ_P0071209 Ugt2a1 protein_coding protein_coding MGP_WSBEiJ_T0014653.1 MGP_WSBEiJ_G0012783.1 mouse_genomes_project 5 106888537 106889003 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007960.1 MGP_WSBEiJ_G0006500.1 mouse_genomes_project 5 31888751 31890450 + lincRNA lincRNA MGP_WSBEiJ_T0001731.1 MGP_WSBEiJ_G0001653.1 mouse_genomes_project 5 116641663 116645301 - TEC TEC MGP_WSBEiJ_T0074822.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 154710358 154950053 + MGP_WSBEiJ_P0074822 Fry protein_coding protein_coding MGP_WSBEiJ_T0074823.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 154710380 154958440 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074824.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 154710380 154955307 + MGP_WSBEiJ_P0074824 Fry protein_coding protein_coding MGP_WSBEiJ_T0074825.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 154793814 154950028 + MGP_WSBEiJ_P0074825 Fry protein_coding protein_coding MGP_WSBEiJ_T0074826.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 154864038 154866405 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074827.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 154866266 155122323 + MGP_WSBEiJ_P0074827 Fry protein_coding protein_coding MGP_WSBEiJ_T0074828.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 154903636 155004558 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074829.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155014375 155017046 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074830.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155050777 155055080 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074831.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155060390 155122323 + MGP_WSBEiJ_P0074831 Fry protein_coding protein_coding MGP_WSBEiJ_T0074832.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155075166 155122323 + MGP_WSBEiJ_P0074832 Fry protein_coding protein_coding MGP_WSBEiJ_T0074833.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155081747 155121383 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074834.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155084682 155088363 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074835.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155111790 155114408 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074836.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155114719 155116597 + Fry protein_coding retained_intron MGP_WSBEiJ_T0074837.1 MGP_WSBEiJ_G0029583.1 mouse_genomes_project 5 155120456 155122205 + Fry protein_coding retained_intron MGP_WSBEiJ_T0071993.1 MGP_WSBEiJ_G0029052.1 mouse_genomes_project 5 110245952 110260546 - MGP_WSBEiJ_P0071993 protein_coding protein_coding MGP_WSBEiJ_T0001652.1 MGP_WSBEiJ_G0001574.1 mouse_genomes_project 5 73585712 73590606 - TEC TEC MGP_WSBEiJ_T0071391.1 MGP_WSBEiJ_G0028928.1 mouse_genomes_project 5 92356413 92359229 + Gm1045 protein_coding retained_intron MGP_WSBEiJ_T0071392.1 MGP_WSBEiJ_G0028928.1 mouse_genomes_project 5 92356413 92364258 + MGP_WSBEiJ_P0071392 Gm1045 protein_coding protein_coding MGP_WSBEiJ_T0017594.1 MGP_WSBEiJ_G0015034.1 mouse_genomes_project 5 127351623 127354984 + Tctn2 processed_transcript retained_intron MGP_WSBEiJ_T0017595.1 MGP_WSBEiJ_G0015034.1 mouse_genomes_project 5 127351623 127382491 + Tctn2 processed_transcript processed_transcript MGP_WSBEiJ_T0017596.1 MGP_WSBEiJ_G0015034.1 mouse_genomes_project 5 127351658 127358569 + Tctn2 processed_transcript retained_intron MGP_WSBEiJ_T0017597.1 MGP_WSBEiJ_G0015034.1 mouse_genomes_project 5 127351661 127356230 + Tctn2 processed_transcript retained_intron MGP_WSBEiJ_T0017598.1 MGP_WSBEiJ_G0015034.1 mouse_genomes_project 5 127351666 127373282 + Tctn2 processed_transcript retained_intron MGP_WSBEiJ_T0017599.1 MGP_WSBEiJ_G0015034.1 mouse_genomes_project 5 127351671 127382211 + Tctn2 processed_transcript processed_transcript MGP_WSBEiJ_T0071841.1 MGP_WSBEiJ_G0029024.1 mouse_genomes_project 5 108579607 108612590 + MGP_WSBEiJ_P0071841 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071842.1 MGP_WSBEiJ_G0029024.1 mouse_genomes_project 5 108594779 108609407 + MGP_WSBEiJ_P0071842 protein_coding protein_coding MGP_WSBEiJ_T0071843.1 MGP_WSBEiJ_G0029024.1 mouse_genomes_project 5 108595146 108610756 + MGP_WSBEiJ_P0071843 protein_coding protein_coding MGP_WSBEiJ_T0071844.1 MGP_WSBEiJ_G0029024.1 mouse_genomes_project 5 108595177 108605290 + MGP_WSBEiJ_P0071844 protein_coding protein_coding MGP_WSBEiJ_T0071845.1 MGP_WSBEiJ_G0029024.1 mouse_genomes_project 5 108595180 108608408 + MGP_WSBEiJ_P0071845 protein_coding protein_coding MGP_WSBEiJ_T0071846.1 MGP_WSBEiJ_G0029024.1 mouse_genomes_project 5 108602150 108605422 + protein_coding processed_transcript MGP_WSBEiJ_T0014556.1 MGP_WSBEiJ_G0012686.1 mouse_genomes_project 5 59034404 59035038 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072883.1 MGP_WSBEiJ_G0029223.1 mouse_genomes_project 5 124835637 124883771 + MGP_WSBEiJ_P0072883 Pptc7 protein_coding protein_coding MGP_WSBEiJ_T0007915.1 MGP_WSBEiJ_G0006472.1 mouse_genomes_project 5 7209826 7333297 + Gm42831 lincRNA lincRNA MGP_WSBEiJ_T0007916.1 MGP_WSBEiJ_G0006472.1 mouse_genomes_project 5 7209876 7324625 + Gm42831 lincRNA lincRNA MGP_WSBEiJ_T0001832.1 MGP_WSBEiJ_G0001753.1 mouse_genomes_project 5 137334539 137335505 - TEC TEC MGP_WSBEiJ_T0070733.1 MGP_WSBEiJ_G0028778.1 mouse_genomes_project 5 65873273 65885682 + MGP_WSBEiJ_P0070733 Uchl1 protein_coding protein_coding MGP_WSBEiJ_T0070734.1 MGP_WSBEiJ_G0028778.1 mouse_genomes_project 5 65873424 65874030 + Uchl1 protein_coding retained_intron MGP_WSBEiJ_T0070735.1 MGP_WSBEiJ_G0028778.1 mouse_genomes_project 5 65874076 65885677 + Uchl1 protein_coding retained_intron MGP_WSBEiJ_T0070736.1 MGP_WSBEiJ_G0028778.1 mouse_genomes_project 5 65882146 65885386 + Uchl1 protein_coding retained_intron MGP_WSBEiJ_T0072788.1 MGP_WSBEiJ_G0029210.1 mouse_genomes_project 5 123965178 123995566 - MGP_WSBEiJ_P0072788 Aldh2 protein_coding protein_coding MGP_WSBEiJ_T0072789.1 MGP_WSBEiJ_G0029210.1 mouse_genomes_project 5 123967023 123970330 - Aldh2 protein_coding retained_intron MGP_WSBEiJ_T0072790.1 MGP_WSBEiJ_G0029210.1 mouse_genomes_project 5 123967024 123978809 - MGP_WSBEiJ_P0072790 Aldh2 protein_coding protein_coding MGP_WSBEiJ_T0072791.1 MGP_WSBEiJ_G0029210.1 mouse_genomes_project 5 123967102 123971981 - MGP_WSBEiJ_P0072791 Aldh2 protein_coding protein_coding MGP_WSBEiJ_T0072792.1 MGP_WSBEiJ_G0029210.1 mouse_genomes_project 5 123969458 123995322 - MGP_WSBEiJ_P0072792 Aldh2 protein_coding protein_coding MGP_WSBEiJ_T0072793.1 MGP_WSBEiJ_G0029210.1 mouse_genomes_project 5 123970614 123974270 - Aldh2 protein_coding retained_intron MGP_WSBEiJ_T0072794.1 MGP_WSBEiJ_G0029210.1 mouse_genomes_project 5 123975599 123995324 - MGP_WSBEiJ_P0072794 Aldh2 protein_coding protein_coding MGP_WSBEiJ_T0004691.1 MGP_WSBEiJ_G0004048.1 mouse_genomes_project 5 111642851 111643445 - Gm43137 antisense antisense MGP_WSBEiJ_T0001772.1 MGP_WSBEiJ_G0001694.1 mouse_genomes_project 5 125504317 125505896 - TEC TEC MGP_WSBEiJ_T0008141.1 MGP_WSBEiJ_G0006637.1 mouse_genomes_project 5 111964352 111976496 + A630023P12Rik lincRNA lincRNA MGP_WSBEiJ_T0008142.1 MGP_WSBEiJ_G0006637.1 mouse_genomes_project 5 111964373 111964952 + A630023P12Rik lincRNA lincRNA MGP_WSBEiJ_T0008143.1 MGP_WSBEiJ_G0006637.1 mouse_genomes_project 5 111970488 111975650 + A630023P12Rik lincRNA lincRNA MGP_WSBEiJ_T0008144.1 MGP_WSBEiJ_G0006637.1 mouse_genomes_project 5 111970524 111972874 + A630023P12Rik lincRNA lincRNA MGP_WSBEiJ_T0008145.1 MGP_WSBEiJ_G0006637.1 mouse_genomes_project 5 111970555 111976504 + A630023P12Rik lincRNA lincRNA MGP_WSBEiJ_T0069366.1 MGP_WSBEiJ_G0028555.1 mouse_genomes_project 5 25412141 25467040 - MGP_WSBEiJ_P0069366 Paxip1 protein_coding protein_coding MGP_WSBEiJ_T0069367.1 MGP_WSBEiJ_G0028555.1 mouse_genomes_project 5 25416146 25426428 - Paxip1 protein_coding retained_intron MGP_WSBEiJ_T0069368.1 MGP_WSBEiJ_G0028555.1 mouse_genomes_project 5 25435174 25441176 - Paxip1 protein_coding retained_intron MGP_WSBEiJ_T0069369.1 MGP_WSBEiJ_G0028555.1 mouse_genomes_project 5 25447909 25466885 - MGP_WSBEiJ_P0069369 Paxip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069370.1 MGP_WSBEiJ_G0028555.1 mouse_genomes_project 5 25456884 25467181 - Paxip1 protein_coding processed_transcript MGP_WSBEiJ_T0069371.1 MGP_WSBEiJ_G0028555.1 mouse_genomes_project 5 25459015 25466873 - Paxip1 protein_coding retained_intron MGP_WSBEiJ_T0069372.1 MGP_WSBEiJ_G0028555.1 mouse_genomes_project 5 25462026 25465863 - Paxip1 protein_coding retained_intron MGP_WSBEiJ_T0014440.1 MGP_WSBEiJ_G0012570.1 mouse_genomes_project 5 16060483 16061081 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008134.1 MGP_WSBEiJ_G0006634.1 mouse_genomes_project 5 109524382 109526319 + Gm10419 lincRNA lincRNA MGP_WSBEiJ_T0008135.1 MGP_WSBEiJ_G0006634.1 mouse_genomes_project 5 109524404 109529420 + Gm10419 lincRNA lincRNA MGP_WSBEiJ_T0008136.1 MGP_WSBEiJ_G0006634.1 mouse_genomes_project 5 109524849 109532481 + Gm10419 lincRNA lincRNA MGP_WSBEiJ_T0008137.1 MGP_WSBEiJ_G0006634.1 mouse_genomes_project 5 109526497 109534823 + Gm10419 lincRNA lincRNA MGP_WSBEiJ_T0008138.1 MGP_WSBEiJ_G0006634.1 mouse_genomes_project 5 109527473 109529421 + Gm10419 lincRNA lincRNA MGP_WSBEiJ_T0004633.1 MGP_WSBEiJ_G0004008.1 mouse_genomes_project 5 70934492 70955266 - Gm43477 antisense antisense MGP_WSBEiJ_T0008338.1 MGP_WSBEiJ_G0006766.1 mouse_genomes_project 5 154200942 154208863 + Gm43153 lincRNA lincRNA MGP_WSBEiJ_T0008209.1 MGP_WSBEiJ_G0006680.1 mouse_genomes_project 5 121868901 121875844 - Tbx3os2 lincRNA lincRNA MGP_WSBEiJ_T0001817.1 MGP_WSBEiJ_G0001738.1 mouse_genomes_project 5 135105900 135106872 - TEC TEC MGP_WSBEiJ_T0001820.1 MGP_WSBEiJ_G0001741.1 mouse_genomes_project 5 135151116 135153322 - TEC TEC MGP_WSBEiJ_T0014469.1 MGP_WSBEiJ_G0012599.1 mouse_genomes_project 5 21770859 21771514 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001819.1 MGP_WSBEiJ_G0001740.1 mouse_genomes_project 5 135138491 135145325 - TEC TEC MGP_WSBEiJ_T0070319.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41935678 41975263 - MGP_WSBEiJ_P0070319 Fbxl5 protein_coding protein_coding MGP_WSBEiJ_T0070320.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41935679 41975229 - MGP_WSBEiJ_P0070320 Fbxl5 protein_coding protein_coding MGP_WSBEiJ_T0070321.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41935687 42020584 - MGP_WSBEiJ_P0070321 Fbxl5 protein_coding protein_coding MGP_WSBEiJ_T0070322.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41936362 41975168 - MGP_WSBEiJ_P0070322 Fbxl5 protein_coding protein_coding MGP_WSBEiJ_T0070323.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41941684 41975222 - MGP_WSBEiJ_P0070323 Fbxl5 protein_coding protein_coding MGP_WSBEiJ_T0070324.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41946924 41975241 - MGP_WSBEiJ_P0070324 Fbxl5 protein_coding protein_coding MGP_WSBEiJ_T0070325.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41948911 41975257 - MGP_WSBEiJ_P0070325 Fbxl5 protein_coding protein_coding MGP_WSBEiJ_T0070326.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41949716 41950917 - Fbxl5 protein_coding retained_intron MGP_WSBEiJ_T0070327.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41952061 41975222 - Fbxl5 protein_coding retained_intron MGP_WSBEiJ_T0070328.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41953341 41975238 - Fbxl5 protein_coding retained_intron MGP_WSBEiJ_T0070329.1 MGP_WSBEiJ_G0028713.1 mouse_genomes_project 5 41961364 41975220 - MGP_WSBEiJ_P0070329 Fbxl5 protein_coding protein_coding MGP_WSBEiJ_T0070588.1 MGP_WSBEiJ_G0028759.1 mouse_genomes_project 5 64120209 64161039 - Tmem156 protein_coding processed_transcript MGP_WSBEiJ_T0070589.1 MGP_WSBEiJ_G0028759.1 mouse_genomes_project 5 64128411 64160994 - MGP_WSBEiJ_P0070589 Tmem156 protein_coding protein_coding MGP_WSBEiJ_T0070590.1 MGP_WSBEiJ_G0028759.1 mouse_genomes_project 5 64130951 64147880 - MGP_WSBEiJ_P0070590 Tmem156 protein_coding unknown_likely_coding MGP_WSBEiJ_T0070591.1 MGP_WSBEiJ_G0028759.1 mouse_genomes_project 5 64160124 64161035 - Tmem156 protein_coding retained_intron MGP_WSBEiJ_T0074176.1 MGP_WSBEiJ_G0029446.1 mouse_genomes_project 5 142298545 142314331 - MGP_WSBEiJ_P0074176 Zfp68 protein_coding protein_coding MGP_WSBEiJ_T0074177.1 MGP_WSBEiJ_G0029446.1 mouse_genomes_project 5 142299893 142314328 - MGP_WSBEiJ_P0074177 Zfp68 protein_coding protein_coding MGP_WSBEiJ_T0074178.1 MGP_WSBEiJ_G0029446.1 mouse_genomes_project 5 142301027 142301969 - Zfp68 protein_coding processed_transcript MGP_WSBEiJ_T0074179.1 MGP_WSBEiJ_G0029446.1 mouse_genomes_project 5 142301031 142314310 - MGP_WSBEiJ_P0074179 Zfp68 protein_coding protein_coding MGP_WSBEiJ_T0074180.1 MGP_WSBEiJ_G0029446.1 mouse_genomes_project 5 142306632 142314223 - MGP_WSBEiJ_P0074180 Zfp68 protein_coding protein_coding MGP_WSBEiJ_T0074181.1 MGP_WSBEiJ_G0029446.1 mouse_genomes_project 5 142310750 142314308 - Zfp68 protein_coding retained_intron MGP_WSBEiJ_T0014480.1 MGP_WSBEiJ_G0012610.1 mouse_genomes_project 5 24499632 24499767 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011407.1 MGP_WSBEiJ_G0009564.1 mouse_genomes_project 5 113769547 113769908 - Gm27998 misc_RNA misc_RNA MGP_WSBEiJ_T0070584.1 MGP_WSBEiJ_G0028757.1 mouse_genomes_project 5 64009501 64017948 - MGP_WSBEiJ_P0070584 Tlr6 protein_coding protein_coding MGP_WSBEiJ_T0070585.1 MGP_WSBEiJ_G0028757.1 mouse_genomes_project 5 64013138 64017998 - MGP_WSBEiJ_P0070585 Tlr6 protein_coding protein_coding MGP_WSBEiJ_T0014429.1 MGP_WSBEiJ_G0012559.1 mouse_genomes_project 5 9644723 9650724 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008323.1 MGP_WSBEiJ_G0006758.1 mouse_genomes_project 5 153518549 153524382 + Gm15408 lincRNA lincRNA MGP_WSBEiJ_T0007936.1 MGP_WSBEiJ_G0006484.1 mouse_genomes_project 5 22575718 22589231 + 1500035N22Rik lincRNA lincRNA MGP_WSBEiJ_T0014512.1 MGP_WSBEiJ_G0012642.1 mouse_genomes_project 5 35362234 35362385 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098367.1 MGP_WSBEiJ_G0037030.1 mouse_genomes_project 5 97462753 97462947 + Gm24623 snRNA snRNA MGP_WSBEiJ_T0070448.1 MGP_WSBEiJ_G0028730.1 mouse_genomes_project 5 48304013 48405627 - MGP_WSBEiJ_P0070448 Adgra3 protein_coding protein_coding MGP_WSBEiJ_T0070449.1 MGP_WSBEiJ_G0028730.1 mouse_genomes_project 5 48310167 48316133 - Adgra3 protein_coding processed_transcript MGP_WSBEiJ_T0070450.1 MGP_WSBEiJ_G0028730.1 mouse_genomes_project 5 48331606 48346332 - Adgra3 protein_coding processed_transcript MGP_WSBEiJ_T0070451.1 MGP_WSBEiJ_G0028730.1 mouse_genomes_project 5 48351851 48355594 - Adgra3 protein_coding retained_intron MGP_WSBEiJ_T0070452.1 MGP_WSBEiJ_G0028730.1 mouse_genomes_project 5 48397003 48400002 - Adgra3 protein_coding retained_intron MGP_WSBEiJ_T0070453.1 MGP_WSBEiJ_G0028730.1 mouse_genomes_project 5 48397483 48405266 - Adgra3 protein_coding processed_transcript MGP_WSBEiJ_T0070454.1 MGP_WSBEiJ_G0028730.1 mouse_genomes_project 5 48404744 48405266 - Adgra3 protein_coding retained_intron MGP_WSBEiJ_T0071891.1 MGP_WSBEiJ_G0029033.1 mouse_genomes_project 5 109024487 109107667 - MGP_WSBEiJ_P0071891 Fam69a protein_coding protein_coding MGP_WSBEiJ_T0071892.1 MGP_WSBEiJ_G0029033.1 mouse_genomes_project 5 109026137 109106363 - MGP_WSBEiJ_P0071892 Fam69a protein_coding protein_coding MGP_WSBEiJ_T0071893.1 MGP_WSBEiJ_G0029033.1 mouse_genomes_project 5 109030782 109092810 - MGP_WSBEiJ_P0071893 Fam69a protein_coding protein_coding MGP_WSBEiJ_T0014514.1 MGP_WSBEiJ_G0012644.1 mouse_genomes_project 5 36599589 36599793 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004554.1 MGP_WSBEiJ_G0003944.1 mouse_genomes_project 5 5713469 5741414 - Gm5106 antisense antisense MGP_WSBEiJ_T0071440.1 MGP_WSBEiJ_G0028938.1 mouse_genomes_project 5 92749767 92751992 - Cxcl10 protein_coding retained_intron MGP_WSBEiJ_T0071441.1 MGP_WSBEiJ_G0028938.1 mouse_genomes_project 5 92749767 92752007 - MGP_WSBEiJ_P0071441 Cxcl10 protein_coding protein_coding MGP_WSBEiJ_T0071442.1 MGP_WSBEiJ_G0028938.1 mouse_genomes_project 5 92749934 92752014 - MGP_WSBEiJ_P0071442 Cxcl10 protein_coding protein_coding MGP_WSBEiJ_T0071443.1 MGP_WSBEiJ_G0028938.1 mouse_genomes_project 5 92751125 92752007 - Cxcl10 protein_coding retained_intron MGP_WSBEiJ_T0001468.1 MGP_WSBEiJ_G0001393.1 mouse_genomes_project 5 32453601 32456009 + TEC TEC MGP_WSBEiJ_T0072472.1 MGP_WSBEiJ_G0029147.1 mouse_genomes_project 5 117209829 117213109 - MGP_WSBEiJ_P0072472 Cox6a1 protein_coding protein_coding MGP_WSBEiJ_T0072473.1 MGP_WSBEiJ_G0029147.1 mouse_genomes_project 5 117209844 117213042 - Cox6a1 protein_coding retained_intron MGP_WSBEiJ_T0070687.1 MGP_WSBEiJ_G0028774.1 mouse_genomes_project 5 65124481 65136704 - 9130230L23Rik protein_coding retained_intron MGP_WSBEiJ_T0070688.1 MGP_WSBEiJ_G0028774.1 mouse_genomes_project 5 65134267 65156141 - MGP_WSBEiJ_P0070688 9130230L23Rik protein_coding protein_coding MGP_WSBEiJ_T0070689.1 MGP_WSBEiJ_G0028774.1 mouse_genomes_project 5 65134614 65149704 - MGP_WSBEiJ_P0070689 9130230L23Rik protein_coding protein_coding MGP_WSBEiJ_T0070690.1 MGP_WSBEiJ_G0028774.1 mouse_genomes_project 5 65135790 65137808 - 9130230L23Rik protein_coding retained_intron MGP_WSBEiJ_T0070691.1 MGP_WSBEiJ_G0028774.1 mouse_genomes_project 5 65136822 65150819 - 9130230L23Rik protein_coding retained_intron MGP_WSBEiJ_T0070692.1 MGP_WSBEiJ_G0028774.1 mouse_genomes_project 5 65149163 65156141 - 9130230L23Rik protein_coding retained_intron MGP_WSBEiJ_T0070693.1 MGP_WSBEiJ_G0028774.1 mouse_genomes_project 5 65150548 65151264 - 9130230L23Rik protein_coding retained_intron MGP_WSBEiJ_T0001585.1 MGP_WSBEiJ_G0001508.1 mouse_genomes_project 5 63508141 63509095 + TEC TEC MGP_WSBEiJ_T0073224.1 MGP_WSBEiJ_G0029273.1 mouse_genomes_project 5 127230463 127240785 + MGP_WSBEiJ_P0073224 Snrnp35 protein_coding protein_coding MGP_WSBEiJ_T0073225.1 MGP_WSBEiJ_G0029273.1 mouse_genomes_project 5 127230531 127240151 + MGP_WSBEiJ_P0073225 Snrnp35 protein_coding protein_coding MGP_WSBEiJ_T0073226.1 MGP_WSBEiJ_G0029273.1 mouse_genomes_project 5 127230787 127240768 + MGP_WSBEiJ_P0073226 Snrnp35 protein_coding protein_coding MGP_WSBEiJ_T0014751.1 MGP_WSBEiJ_G0012881.1 mouse_genomes_project 5 149795147 149795309 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070809.1 MGP_WSBEiJ_G0028792.1 mouse_genomes_project 5 68833685 68851363 - MGP_WSBEiJ_P0070809 Gnpda2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070810.1 MGP_WSBEiJ_G0028792.1 mouse_genomes_project 5 68835572 68852908 - MGP_WSBEiJ_P0070810 Gnpda2 protein_coding protein_coding MGP_WSBEiJ_T0070811.1 MGP_WSBEiJ_G0028792.1 mouse_genomes_project 5 68835741 68851399 - MGP_WSBEiJ_P0070811 Gnpda2 protein_coding protein_coding MGP_WSBEiJ_T0070812.1 MGP_WSBEiJ_G0028792.1 mouse_genomes_project 5 68835746 68852814 - Gnpda2 protein_coding retained_intron MGP_WSBEiJ_T0070813.1 MGP_WSBEiJ_G0028792.1 mouse_genomes_project 5 68836383 68852842 - MGP_WSBEiJ_P0070813 Gnpda2 protein_coding protein_coding MGP_WSBEiJ_T0070814.1 MGP_WSBEiJ_G0028792.1 mouse_genomes_project 5 68837313 68852861 - MGP_WSBEiJ_P0070814 Gnpda2 protein_coding protein_coding MGP_WSBEiJ_T0070815.1 MGP_WSBEiJ_G0028792.1 mouse_genomes_project 5 68845571 68852857 - MGP_WSBEiJ_P0070815 Gnpda2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071482.1 MGP_WSBEiJ_G0028944.1 mouse_genomes_project 5 93085859 93388815 + MGP_WSBEiJ_P0071482 Shroom3 protein_coding protein_coding MGP_WSBEiJ_T0071483.1 MGP_WSBEiJ_G0028944.1 mouse_genomes_project 5 93086596 93388853 + MGP_WSBEiJ_P0071483 Shroom3 protein_coding protein_coding MGP_WSBEiJ_T0071484.1 MGP_WSBEiJ_G0028944.1 mouse_genomes_project 5 93216179 93222053 + Shroom3 protein_coding processed_transcript MGP_WSBEiJ_T0071485.1 MGP_WSBEiJ_G0028944.1 mouse_genomes_project 5 93222034 93250019 + Shroom3 protein_coding processed_transcript MGP_WSBEiJ_T0071486.1 MGP_WSBEiJ_G0028944.1 mouse_genomes_project 5 93343788 93361419 + MGP_WSBEiJ_P0071486 Shroom3 protein_coding protein_coding MGP_WSBEiJ_T0071487.1 MGP_WSBEiJ_G0028944.1 mouse_genomes_project 5 93359593 93363211 + Shroom3 protein_coding retained_intron MGP_WSBEiJ_T0071488.1 MGP_WSBEiJ_G0028944.1 mouse_genomes_project 5 93370597 93371508 + Shroom3 protein_coding retained_intron MGP_WSBEiJ_T0071489.1 MGP_WSBEiJ_G0028944.1 mouse_genomes_project 5 93386157 93388881 + Shroom3 protein_coding retained_intron MGP_WSBEiJ_T0001534.1 MGP_WSBEiJ_G0001458.1 mouse_genomes_project 5 47427997 47430894 - TEC TEC MGP_WSBEiJ_T0001593.1 MGP_WSBEiJ_G0001516.1 mouse_genomes_project 5 64619764 64623957 - TEC TEC MGP_WSBEiJ_T0001566.1 MGP_WSBEiJ_G0001490.1 mouse_genomes_project 5 56532530 56535120 + TEC TEC MGP_WSBEiJ_T0001805.1 MGP_WSBEiJ_G0001726.1 mouse_genomes_project 5 133991968 133994074 - TEC TEC MGP_WSBEiJ_T0017617.1 MGP_WSBEiJ_G0015039.1 mouse_genomes_project 5 153898759 153964435 + Gm20488 processed_transcript processed_transcript MGP_WSBEiJ_T0001679.1 MGP_WSBEiJ_G0001601.1 mouse_genomes_project 5 97433192 97436416 + TEC TEC MGP_WSBEiJ_T0098337.1 MGP_WSBEiJ_G0037000.1 mouse_genomes_project 5 32499547 32499652 + Gm22847 snRNA snRNA MGP_WSBEiJ_T0073144.1 MGP_WSBEiJ_G0029263.1 mouse_genomes_project 5 126709205 126736828 - MGP_WSBEiJ_P0073144 Vps37b protein_coding protein_coding MGP_WSBEiJ_T0073145.1 MGP_WSBEiJ_G0029263.1 mouse_genomes_project 5 126710700 126716281 - Vps37b protein_coding processed_transcript MGP_WSBEiJ_T0073146.1 MGP_WSBEiJ_G0029263.1 mouse_genomes_project 5 126732315 126736816 - Vps37b protein_coding processed_transcript MGP_WSBEiJ_T0008284.1 MGP_WSBEiJ_G0006724.1 mouse_genomes_project 5 140808875 140828901 - Gm42456 lincRNA lincRNA MGP_WSBEiJ_T0070543.1 MGP_WSBEiJ_G0028748.1 mouse_genomes_project 5 60752843 60755192 + MGP_WSBEiJ_P0070543 G6pd2 protein_coding protein_coding MGP_WSBEiJ_T0001864.1 MGP_WSBEiJ_G0001784.1 mouse_genomes_project 5 153931058 153932696 + TEC TEC MGP_WSBEiJ_T0072345.1 MGP_WSBEiJ_G0029121.1 mouse_genomes_project 5 116400234 116428215 - MGP_WSBEiJ_P0072345 Trpv4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072346.1 MGP_WSBEiJ_G0029121.1 mouse_genomes_project 5 116400237 116441567 - MGP_WSBEiJ_P0072346 Trpv4 protein_coding protein_coding MGP_WSBEiJ_T0072347.1 MGP_WSBEiJ_G0029121.1 mouse_genomes_project 5 116400239 116441564 - MGP_WSBEiJ_P0072347 Trpv4 protein_coding protein_coding MGP_WSBEiJ_T0072348.1 MGP_WSBEiJ_G0029121.1 mouse_genomes_project 5 116400242 116417994 - Trpv4 protein_coding retained_intron MGP_WSBEiJ_T0072349.1 MGP_WSBEiJ_G0029121.1 mouse_genomes_project 5 116400738 116428215 - MGP_WSBEiJ_P0072349 Trpv4 protein_coding protein_coding MGP_WSBEiJ_T0072350.1 MGP_WSBEiJ_G0029121.1 mouse_genomes_project 5 116400738 116428215 - MGP_WSBEiJ_P0072350 Trpv4 protein_coding protein_coding MGP_WSBEiJ_T0072351.1 MGP_WSBEiJ_G0029121.1 mouse_genomes_project 5 116400738 116428215 - MGP_WSBEiJ_P0072351 Trpv4 protein_coding protein_coding MGP_WSBEiJ_T0072352.1 MGP_WSBEiJ_G0029121.1 mouse_genomes_project 5 116406335 116410229 - Trpv4 protein_coding retained_intron MGP_WSBEiJ_T0004681.1 MGP_WSBEiJ_G0004040.1 mouse_genomes_project 5 105000479 105007293 + Gm26703 antisense antisense MGP_WSBEiJ_T0004682.1 MGP_WSBEiJ_G0004040.1 mouse_genomes_project 5 105000553 105002189 + Gm26703 antisense antisense MGP_WSBEiJ_T0004683.1 MGP_WSBEiJ_G0004040.1 mouse_genomes_project 5 105005156 105010984 + Gm26703 antisense antisense MGP_WSBEiJ_T0014769.1 MGP_WSBEiJ_G0012899.1 mouse_genomes_project 5 154849413 154849801 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001499.1 MGP_WSBEiJ_G0001424.1 mouse_genomes_project 5 42810728 42810867 + TEC TEC MGP_WSBEiJ_T0071564.1 MGP_WSBEiJ_G0028965.1 mouse_genomes_project 5 99576429 99688598 - MGP_WSBEiJ_P0071564 Prkg2 protein_coding protein_coding MGP_WSBEiJ_T0071565.1 MGP_WSBEiJ_G0028965.1 mouse_genomes_project 5 99577915 99591285 - MGP_WSBEiJ_P0071565 Prkg2 protein_coding protein_coding MGP_WSBEiJ_T0071566.1 MGP_WSBEiJ_G0028965.1 mouse_genomes_project 5 99577915 99591283 - MGP_WSBEiJ_P0071566 Prkg2 protein_coding protein_coding MGP_WSBEiJ_T0071567.1 MGP_WSBEiJ_G0028965.1 mouse_genomes_project 5 99578367 99688282 - MGP_WSBEiJ_P0071567 Prkg2 protein_coding protein_coding MGP_WSBEiJ_T0071568.1 MGP_WSBEiJ_G0028965.1 mouse_genomes_project 5 99594827 99617068 - Prkg2 protein_coding retained_intron MGP_WSBEiJ_T0070213.1 MGP_WSBEiJ_G0028692.1 mouse_genomes_project 5 35806939 35812398 + MGP_WSBEiJ_P0070213 Cytl1 protein_coding protein_coding MGP_WSBEiJ_T0070214.1 MGP_WSBEiJ_G0028692.1 mouse_genomes_project 5 35809882 35812393 + Cytl1 protein_coding retained_intron MGP_WSBEiJ_T0014692.1 MGP_WSBEiJ_G0012822.1 mouse_genomes_project 5 117384796 117385297 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073403.1 MGP_WSBEiJ_G0029307.1 mouse_genomes_project 5 132747073 132800070 + MGP_WSBEiJ_P0073403 Gbas protein_coding protein_coding MGP_WSBEiJ_T0073404.1 MGP_WSBEiJ_G0029307.1 mouse_genomes_project 5 132747109 132799993 + MGP_WSBEiJ_P0073404 Gbas protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073405.1 MGP_WSBEiJ_G0029307.1 mouse_genomes_project 5 132747111 132799117 + MGP_WSBEiJ_P0073405 Gbas protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073406.1 MGP_WSBEiJ_G0029307.1 mouse_genomes_project 5 132747155 132800076 + MGP_WSBEiJ_P0073406 Gbas protein_coding unknown_likely_coding MGP_WSBEiJ_T0073407.1 MGP_WSBEiJ_G0029307.1 mouse_genomes_project 5 132790299 132798946 + Gbas protein_coding retained_intron MGP_WSBEiJ_T0073408.1 MGP_WSBEiJ_G0029307.1 mouse_genomes_project 5 132790871 132792506 + Gbas protein_coding processed_transcript MGP_WSBEiJ_T0100864.1 MGP_WSBEiJ_G0039322.1 mouse_genomes_project 5 110670174 110678623 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001537.1 MGP_WSBEiJ_G0001461.1 mouse_genomes_project 5 47564564 47564946 - TEC TEC MGP_WSBEiJ_T0001673.1 MGP_WSBEiJ_G0001595.1 mouse_genomes_project 5 92574906 92575464 - TEC TEC MGP_WSBEiJ_T0069286.1 MGP_WSBEiJ_G0028537.1 mouse_genomes_project 5 22089524 22097309 - MGP_WSBEiJ_P0069286 Asb10 protein_coding protein_coding MGP_WSBEiJ_T0069287.1 MGP_WSBEiJ_G0028537.1 mouse_genomes_project 5 22090465 22097830 - MGP_WSBEiJ_P0069287 Asb10 protein_coding protein_coding MGP_WSBEiJ_T0069288.1 MGP_WSBEiJ_G0028537.1 mouse_genomes_project 5 22090483 22097444 - MGP_WSBEiJ_P0069288 Asb10 protein_coding protein_coding MGP_WSBEiJ_T0001841.1 MGP_WSBEiJ_G0001761.1 mouse_genomes_project 5 138864491 138866148 - TEC TEC MGP_WSBEiJ_T0004643.1 MGP_WSBEiJ_G0004016.1 mouse_genomes_project 5 76668628 76676374 + Hopxos antisense antisense MGP_WSBEiJ_T0071373.1 MGP_WSBEiJ_G0028921.1 mouse_genomes_project 5 91238570 91246852 + Mthfd2l protein_coding processed_transcript MGP_WSBEiJ_T0071374.1 MGP_WSBEiJ_G0028921.1 mouse_genomes_project 5 91238709 91240875 + MGP_WSBEiJ_P0071374 Mthfd2l protein_coding protein_coding MGP_WSBEiJ_T0071375.1 MGP_WSBEiJ_G0028921.1 mouse_genomes_project 5 91238733 91341971 + MGP_WSBEiJ_P0071375 Mthfd2l protein_coding protein_coding MGP_WSBEiJ_T0071376.1 MGP_WSBEiJ_G0028921.1 mouse_genomes_project 5 91259281 91291208 + Mthfd2l protein_coding retained_intron MGP_WSBEiJ_T0071693.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103736349 104042223 - MGP_WSBEiJ_P0071693 Mapk10 protein_coding protein_coding MGP_WSBEiJ_T0071694.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103736351 103886896 - MGP_WSBEiJ_P0071694 Mapk10 protein_coding protein_coding MGP_WSBEiJ_T0071695.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103736351 103886946 - MGP_WSBEiJ_P0071695 Mapk10 protein_coding protein_coding MGP_WSBEiJ_T0071696.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103736351 104042223 - MGP_WSBEiJ_P0071696 Mapk10 protein_coding protein_coding MGP_WSBEiJ_T0071697.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103736809 103886945 - MGP_WSBEiJ_P0071697 Mapk10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071698.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103741521 104036814 - MGP_WSBEiJ_P0071698 Mapk10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071699.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103749346 104042162 - MGP_WSBEiJ_P0071699 Mapk10 protein_coding protein_coding MGP_WSBEiJ_T0071700.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103815887 103855380 - MGP_WSBEiJ_P0071700 Mapk10 protein_coding protein_coding MGP_WSBEiJ_T0071701.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103816198 104042223 - MGP_WSBEiJ_P0071701 Mapk10 protein_coding protein_coding MGP_WSBEiJ_T0071702.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 103989299 104042173 - Mapk10 protein_coding processed_transcript MGP_WSBEiJ_T0071703.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 104036707 104039905 - Mapk10 protein_coding processed_transcript MGP_WSBEiJ_T0071704.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 104036711 104042223 - Mapk10 protein_coding processed_transcript MGP_WSBEiJ_T0071705.1 MGP_WSBEiJ_G0028987.1 mouse_genomes_project 5 104039843 104041760 - Mapk10 protein_coding processed_transcript MGP_WSBEiJ_T0004571.1 MGP_WSBEiJ_G0003958.1 mouse_genomes_project 5 22483223 22487173 + Prkag2os1 antisense antisense MGP_WSBEiJ_T0004703.1 MGP_WSBEiJ_G0004057.1 mouse_genomes_project 5 115531448 115531964 + Gm17122 antisense antisense MGP_WSBEiJ_T0099597.1 MGP_WSBEiJ_G0038260.1 mouse_genomes_project 5 63167416 63167550 + Gm22559 snoRNA snoRNA MGP_WSBEiJ_T0014521.1 MGP_WSBEiJ_G0012651.1 mouse_genomes_project 5 40716431 40716865 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071764.1 MGP_WSBEiJ_G0029008.1 mouse_genomes_project 5 106326162 106336590 - protein_coding processed_transcript MGP_WSBEiJ_T0004810.1 MGP_WSBEiJ_G0004131.1 mouse_genomes_project 5 151790046 151792410 + Gm26597 antisense antisense MGP_WSBEiJ_T0014539.1 MGP_WSBEiJ_G0012669.1 mouse_genomes_project 5 53184407 53184561 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004778.1 MGP_WSBEiJ_G0004110.1 mouse_genomes_project 5 138492408 138493269 - Gm43500 antisense antisense MGP_WSBEiJ_T0010547.1 MGP_WSBEiJ_G0008704.1 mouse_genomes_project 5 137591945 137592014 + Mir3965 miRNA miRNA MGP_WSBEiJ_T0071211.1 MGP_WSBEiJ_G0028873.1 mouse_genomes_project 5 87533613 87566977 - MGP_WSBEiJ_P0071211 Gm43638 protein_coding protein_coding MGP_WSBEiJ_T0074508.1 MGP_WSBEiJ_G0029516.1 mouse_genomes_project 5 147968119 147977858 + MGP_WSBEiJ_P0074508 Gm42421 protein_coding protein_coding MGP_WSBEiJ_T0001711.1 MGP_WSBEiJ_G0001633.1 mouse_genomes_project 5 109719981 109723264 - TEC TEC MGP_WSBEiJ_T0072838.1 MGP_WSBEiJ_G0029216.1 mouse_genomes_project 5 124348645 124354294 + MGP_WSBEiJ_P0072838 Fam109a protein_coding protein_coding MGP_WSBEiJ_T0072839.1 MGP_WSBEiJ_G0029216.1 mouse_genomes_project 5 124348656 124354261 + MGP_WSBEiJ_P0072839 Fam109a protein_coding protein_coding MGP_WSBEiJ_T0072840.1 MGP_WSBEiJ_G0029216.1 mouse_genomes_project 5 124348666 124352546 + MGP_WSBEiJ_P0072840 Fam109a protein_coding protein_coding MGP_WSBEiJ_T0014555.1 MGP_WSBEiJ_G0012685.1 mouse_genomes_project 5 58875843 58876037 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001814.1 MGP_WSBEiJ_G0001735.1 mouse_genomes_project 5 135029309 135032319 - TEC TEC MGP_WSBEiJ_T0069520.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627469 28629983 + MGP_WSBEiJ_P0069520 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0069521.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627627 28635459 + MGP_WSBEiJ_P0069521 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0069522.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627710 28645641 + MGP_WSBEiJ_P0069522 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0069523.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627716 28632608 + Agbl5 protein_coding retained_intron MGP_WSBEiJ_T0069524.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627731 28645343 + Agbl5 protein_coding retained_intron MGP_WSBEiJ_T0069525.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627744 28634858 + Agbl5 protein_coding retained_intron MGP_WSBEiJ_T0069526.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627744 28645342 + MGP_WSBEiJ_P0069526 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0069527.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627749 28642161 + MGP_WSBEiJ_P0069527 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0069528.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627776 28645342 + MGP_WSBEiJ_P0069528 Agbl5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069529.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627781 28645342 + MGP_WSBEiJ_P0069529 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0069530.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28627781 28642161 + MGP_WSBEiJ_P0069530 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0069531.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28628101 28630645 + MGP_WSBEiJ_P0069531 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0069532.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28629057 28631222 + Agbl5 protein_coding processed_transcript MGP_WSBEiJ_T0069533.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28632978 28634868 + Agbl5 protein_coding retained_intron MGP_WSBEiJ_T0069535.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28633913 28634889 + Agbl5 protein_coding retained_intron MGP_WSBEiJ_T0069536.1 MGP_WSBEiJ_G0028587.1 mouse_genomes_project 5 28634706 28644584 + MGP_WSBEiJ_P0069536 Agbl5 protein_coding protein_coding MGP_WSBEiJ_T0008094.1 MGP_WSBEiJ_G0006604.1 mouse_genomes_project 5 100636175 100647840 + lincRNA lincRNA MGP_WSBEiJ_T0072629.1 MGP_WSBEiJ_G0029174.1 mouse_genomes_project 5 120273181 120328268 - MGP_WSBEiJ_P0072629 Rnft2 protein_coding protein_coding MGP_WSBEiJ_T0072630.1 MGP_WSBEiJ_G0029174.1 mouse_genomes_project 5 120273181 120327412 - MGP_WSBEiJ_P0072630 Rnft2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072631.1 MGP_WSBEiJ_G0029174.1 mouse_genomes_project 5 120273187 120328523 - MGP_WSBEiJ_P0072631 Rnft2 protein_coding protein_coding MGP_WSBEiJ_T0072632.1 MGP_WSBEiJ_G0029174.1 mouse_genomes_project 5 120276077 120312669 - Rnft2 protein_coding retained_intron MGP_WSBEiJ_T0072633.1 MGP_WSBEiJ_G0029174.1 mouse_genomes_project 5 120276559 120284948 - MGP_WSBEiJ_P0072633 Rnft2 protein_coding protein_coding MGP_WSBEiJ_T0072634.1 MGP_WSBEiJ_G0029174.1 mouse_genomes_project 5 120317551 120328401 - MGP_WSBEiJ_P0072634 Rnft2 protein_coding protein_coding MGP_WSBEiJ_T0072635.1 MGP_WSBEiJ_G0029174.1 mouse_genomes_project 5 120320322 120326320 - Rnft2 protein_coding retained_intron MGP_WSBEiJ_T0072636.1 MGP_WSBEiJ_G0029174.1 mouse_genomes_project 5 120320900 120328399 - MGP_WSBEiJ_P0072636 Rnft2 protein_coding protein_coding MGP_WSBEiJ_T0001404.1 MGP_WSBEiJ_G0001332.1 mouse_genomes_project 5 5778448 5778749 + TEC TEC MGP_WSBEiJ_T0070040.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32924039 33011282 + MGP_WSBEiJ_P0070040 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0070041.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32924042 32997781 + Rgs12 protein_coding retained_intron MGP_WSBEiJ_T0070042.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32940334 33018103 + MGP_WSBEiJ_P0070042 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0070043.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32950050 32951515 + Rgs12 protein_coding processed_transcript MGP_WSBEiJ_T0070044.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32951225 32997192 + Rgs12 protein_coding processed_transcript MGP_WSBEiJ_T0070045.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32966873 33000859 + MGP_WSBEiJ_P0070045 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0070046.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32967294 33018094 + MGP_WSBEiJ_P0070046 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0070047.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32967560 33011140 + MGP_WSBEiJ_P0070047 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0070048.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32976802 33011278 + MGP_WSBEiJ_P0070048 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0070049.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32976929 33018094 + MGP_WSBEiJ_P0070049 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0070050.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 32997799 33000349 + Rgs12 protein_coding retained_intron MGP_WSBEiJ_T0070052.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 33000517 33002023 + Rgs12 protein_coding retained_intron MGP_WSBEiJ_T0070053.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 33002027 33007777 + MGP_WSBEiJ_P0070053 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0070054.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 33004589 33009739 + Rgs12 protein_coding processed_transcript MGP_WSBEiJ_T0070055.1 MGP_WSBEiJ_G0028662.1 mouse_genomes_project 5 33004656 33018095 + MGP_WSBEiJ_P0070055 Rgs12 protein_coding protein_coding MGP_WSBEiJ_T0014536.1 MGP_WSBEiJ_G0012666.1 mouse_genomes_project 5 51349211 51350036 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007966.1 MGP_WSBEiJ_G0006504.1 mouse_genomes_project 5 34491280 34512766 - 2210406O10Rik lincRNA lincRNA MGP_WSBEiJ_T0007967.1 MGP_WSBEiJ_G0006504.1 mouse_genomes_project 5 34500916 34512757 - 2210406O10Rik lincRNA lincRNA MGP_WSBEiJ_T0007968.1 MGP_WSBEiJ_G0006504.1 mouse_genomes_project 5 34501744 34512756 - 2210406O10Rik lincRNA lincRNA MGP_WSBEiJ_T0007969.1 MGP_WSBEiJ_G0006504.1 mouse_genomes_project 5 34504488 34512798 - 2210406O10Rik lincRNA lincRNA MGP_WSBEiJ_T0074443.1 MGP_WSBEiJ_G0029503.1 mouse_genomes_project 5 147341226 147355140 - E130309D02Rik protein_coding processed_transcript MGP_WSBEiJ_T0074444.1 MGP_WSBEiJ_G0029503.1 mouse_genomes_project 5 147341238 147355436 - MGP_WSBEiJ_P0074444 E130309D02Rik protein_coding protein_coding MGP_WSBEiJ_T0074445.1 MGP_WSBEiJ_G0029503.1 mouse_genomes_project 5 147341240 147355207 - E130309D02Rik protein_coding retained_intron MGP_WSBEiJ_T0074446.1 MGP_WSBEiJ_G0029503.1 mouse_genomes_project 5 147348400 147355416 - E130309D02Rik protein_coding processed_transcript MGP_WSBEiJ_T0070835.1 MGP_WSBEiJ_G0028798.1 mouse_genomes_project 5 71418561 71430342 - MGP_WSBEiJ_P0070835 Commd8 protein_coding protein_coding MGP_WSBEiJ_T0070836.1 MGP_WSBEiJ_G0028798.1 mouse_genomes_project 5 71419164 71430317 - MGP_WSBEiJ_P0070836 Commd8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070837.1 MGP_WSBEiJ_G0028798.1 mouse_genomes_project 5 71421096 71423258 - Commd8 protein_coding retained_intron MGP_WSBEiJ_T0070838.1 MGP_WSBEiJ_G0028798.1 mouse_genomes_project 5 71421957 71427854 - Commd8 protein_coding processed_transcript MGP_WSBEiJ_T0070839.1 MGP_WSBEiJ_G0028798.1 mouse_genomes_project 5 71423081 71430309 - MGP_WSBEiJ_P0070839 Commd8 protein_coding protein_coding MGP_WSBEiJ_T0098383.1 MGP_WSBEiJ_G0037046.1 mouse_genomes_project 5 123741012 123741170 + Gm24671 snRNA snRNA MGP_WSBEiJ_T0007911.1 MGP_WSBEiJ_G0006468.1 mouse_genomes_project 5 3382459 3390601 + lincRNA lincRNA MGP_WSBEiJ_T0074697.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151824616 151953952 + MGP_WSBEiJ_P0074697 Pan3 protein_coding protein_coding MGP_WSBEiJ_T0074698.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151824908 151953946 + MGP_WSBEiJ_P0074698 Pan3 protein_coding protein_coding MGP_WSBEiJ_T0074699.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151825035 151907718 + MGP_WSBEiJ_P0074699 Pan3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0074700.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151825351 151852382 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074701.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151825351 151850772 + Pan3 protein_coding processed_transcript MGP_WSBEiJ_T0074702.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151825351 151932577 + MGP_WSBEiJ_P0074702 Pan3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074703.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151847927 151892306 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074704.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151847931 151951397 + MGP_WSBEiJ_P0074704 Pan3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074705.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151847931 151951397 + MGP_WSBEiJ_P0074705 Pan3 protein_coding protein_coding MGP_WSBEiJ_T0074706.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151848011 151932202 + MGP_WSBEiJ_P0074706 Pan3 protein_coding protein_coding MGP_WSBEiJ_T0074707.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151848988 151851150 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074708.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151850299 151896237 + Pan3 protein_coding processed_transcript MGP_WSBEiJ_T0074709.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151850330 151953946 + MGP_WSBEiJ_P0074709 Pan3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074710.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151922082 151925837 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074711.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151923866 151932232 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074712.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151924267 151953946 + MGP_WSBEiJ_P0074712 Pan3 protein_coding protein_coding MGP_WSBEiJ_T0074713.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151931644 151932558 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074714.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151935325 151953938 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074715.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151935530 151937311 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074716.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151935606 151938919 + Pan3 protein_coding processed_transcript MGP_WSBEiJ_T0074717.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151936966 151938865 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074718.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151941802 151948613 + Pan3 protein_coding retained_intron MGP_WSBEiJ_T0074719.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151942694 151951128 + Pan3 protein_coding processed_transcript MGP_WSBEiJ_T0074720.1 MGP_WSBEiJ_G0029565.1 mouse_genomes_project 5 151944765 151953943 + MGP_WSBEiJ_P0074720 Pan3 protein_coding protein_coding MGP_WSBEiJ_T0014504.1 MGP_WSBEiJ_G0012634.1 mouse_genomes_project 5 31621157 31621407 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070224.1 MGP_WSBEiJ_G0028695.1 mouse_genomes_project 5 36216674 36239717 - MGP_WSBEiJ_P0070224 Nsg1 protein_coding protein_coding MGP_WSBEiJ_T0070225.1 MGP_WSBEiJ_G0028695.1 mouse_genomes_project 5 36217617 36218312 - MGP_WSBEiJ_P0070225 Nsg1 protein_coding protein_coding MGP_WSBEiJ_T0070226.1 MGP_WSBEiJ_G0028695.1 mouse_genomes_project 5 36217738 36238841 - MGP_WSBEiJ_P0070226 Nsg1 protein_coding protein_coding MGP_WSBEiJ_T0070227.1 MGP_WSBEiJ_G0028695.1 mouse_genomes_project 5 36218025 36239215 - MGP_WSBEiJ_P0070227 Nsg1 protein_coding protein_coding MGP_WSBEiJ_T0070228.1 MGP_WSBEiJ_G0028695.1 mouse_genomes_project 5 36224196 36239172 - MGP_WSBEiJ_P0070228 Nsg1 protein_coding protein_coding MGP_WSBEiJ_T0070229.1 MGP_WSBEiJ_G0028695.1 mouse_genomes_project 5 36235142 36239283 - Nsg1 protein_coding retained_intron MGP_WSBEiJ_T0070230.1 MGP_WSBEiJ_G0028695.1 mouse_genomes_project 5 36238715 36239215 - MGP_WSBEiJ_P0070230 Nsg1 protein_coding protein_coding MGP_WSBEiJ_T0074745.1 MGP_WSBEiJ_G0029570.1 mouse_genomes_project 5 152783496 152860658 - MGP_WSBEiJ_P0074745 Slc7a1 protein_coding protein_coding MGP_WSBEiJ_T0074746.1 MGP_WSBEiJ_G0029570.1 mouse_genomes_project 5 152790584 152853576 - MGP_WSBEiJ_P0074746 Slc7a1 protein_coding protein_coding MGP_WSBEiJ_T0074747.1 MGP_WSBEiJ_G0029570.1 mouse_genomes_project 5 152797456 152799580 - Slc7a1 protein_coding retained_intron MGP_WSBEiJ_T0074748.1 MGP_WSBEiJ_G0029570.1 mouse_genomes_project 5 152798946 152860545 - MGP_WSBEiJ_P0074748 Slc7a1 protein_coding protein_coding MGP_WSBEiJ_T0074749.1 MGP_WSBEiJ_G0029570.1 mouse_genomes_project 5 152809890 152828258 - MGP_WSBEiJ_P0074749 Slc7a1 protein_coding protein_coding MGP_WSBEiJ_T0074750.1 MGP_WSBEiJ_G0029570.1 mouse_genomes_project 5 152852177 152854409 - Slc7a1 protein_coding retained_intron MGP_WSBEiJ_T0001757.1 MGP_WSBEiJ_G0001679.1 mouse_genomes_project 5 123307195 123309496 - TEC TEC MGP_WSBEiJ_T0014593.1 MGP_WSBEiJ_G0012723.1 mouse_genomes_project 5 74797328 74798718 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071531.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97338233 97362809 + MGP_WSBEiJ_P0071531 Anxa3 protein_coding protein_coding MGP_WSBEiJ_T0071532.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97338279 97395547 + MGP_WSBEiJ_P0071532 Anxa3 protein_coding protein_coding MGP_WSBEiJ_T0071533.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97338335 97372416 + MGP_WSBEiJ_P0071533 Anxa3 protein_coding protein_coding MGP_WSBEiJ_T0071534.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97338398 97373355 + MGP_WSBEiJ_P0071534 Anxa3 protein_coding protein_coding MGP_WSBEiJ_T0071535.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97356341 97384164 + Anxa3 protein_coding retained_intron MGP_WSBEiJ_T0071536.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97362700 97387884 + Anxa3 protein_coding retained_intron MGP_WSBEiJ_T0071537.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97375374 97379748 + Anxa3 protein_coding retained_intron MGP_WSBEiJ_T0071538.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97379342 97395263 + Anxa3 protein_coding retained_intron MGP_WSBEiJ_T0071539.1 MGP_WSBEiJ_G0028954.1 mouse_genomes_project 5 97391528 97395441 + MGP_WSBEiJ_P0071539 Anxa3 protein_coding protein_coding MGP_WSBEiJ_T0072428.1 MGP_WSBEiJ_G0029137.1 mouse_genomes_project 5 116960834 116971992 - MGP_WSBEiJ_P0072428 Unc119b protein_coding protein_coding MGP_WSBEiJ_T0072429.1 MGP_WSBEiJ_G0029137.1 mouse_genomes_project 5 116961980 116964530 - Unc119b protein_coding retained_intron MGP_WSBEiJ_T0072430.1 MGP_WSBEiJ_G0029137.1 mouse_genomes_project 5 116966639 116971942 - Unc119b protein_coding retained_intron MGP_WSBEiJ_T0098333.1 MGP_WSBEiJ_G0036996.1 mouse_genomes_project 5 28249352 28249459 - Gm25666 snRNA snRNA MGP_WSBEiJ_T0004816.1 MGP_WSBEiJ_G0004137.1 mouse_genomes_project 5 154655427 154670873 - Gm42557 antisense antisense MGP_WSBEiJ_T0001572.1 MGP_WSBEiJ_G0001496.1 mouse_genomes_project 5 56704337 56705532 + TEC TEC MGP_WSBEiJ_T0074685.1 MGP_WSBEiJ_G0029559.1 mouse_genomes_project 5 151422582 151424617 + MGP_WSBEiJ_P0074685 Polr1d protein_coding protein_coding MGP_WSBEiJ_T0074686.1 MGP_WSBEiJ_G0029559.1 mouse_genomes_project 5 151422878 151458443 + MGP_WSBEiJ_P0074686 Polr1d protein_coding protein_coding MGP_WSBEiJ_T0074687.1 MGP_WSBEiJ_G0029559.1 mouse_genomes_project 5 151423080 151458679 + MGP_WSBEiJ_P0074687 Polr1d protein_coding protein_coding MGP_WSBEiJ_T0074688.1 MGP_WSBEiJ_G0029559.1 mouse_genomes_project 5 151423096 151458656 + MGP_WSBEiJ_P0074688 Polr1d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074689.1 MGP_WSBEiJ_G0029559.1 mouse_genomes_project 5 151447538 151457251 + Polr1d protein_coding retained_intron MGP_WSBEiJ_T0074690.1 MGP_WSBEiJ_G0029559.1 mouse_genomes_project 5 151451746 151458068 + Polr1d protein_coding processed_transcript MGP_WSBEiJ_T0071014.1 MGP_WSBEiJ_G0028829.1 mouse_genomes_project 5 75695719 75708761 + Tmem165 protein_coding processed_transcript MGP_WSBEiJ_T0071015.1 MGP_WSBEiJ_G0028829.1 mouse_genomes_project 5 75695915 75724444 + MGP_WSBEiJ_P0071015 Tmem165 protein_coding protein_coding MGP_WSBEiJ_T0071016.1 MGP_WSBEiJ_G0028829.1 mouse_genomes_project 5 75711207 75716918 + Tmem165 protein_coding retained_intron MGP_WSBEiJ_T0071017.1 MGP_WSBEiJ_G0028829.1 mouse_genomes_project 5 75715882 75721891 + Tmem165 protein_coding processed_transcript MGP_WSBEiJ_T0097429.1 MGP_WSBEiJ_G0036102.1 mouse_genomes_project 5 146876010 146880311 - D430018E03Rik sense_intronic sense_intronic MGP_WSBEiJ_T0001612.1 MGP_WSBEiJ_G0001535.1 mouse_genomes_project 5 65630528 65631154 - TEC TEC MGP_WSBEiJ_T0001665.1 MGP_WSBEiJ_G0001587.1 mouse_genomes_project 5 81615141 81616149 + TEC TEC MGP_WSBEiJ_T0010495.1 MGP_WSBEiJ_G0008652.1 mouse_genomes_project 5 20123293 20123390 + Gm44363 miRNA miRNA MGP_WSBEiJ_T0072958.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125375809 125412041 - MGP_WSBEiJ_P0072958 Anapc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072959.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125375809 125412048 - MGP_WSBEiJ_P0072959 Anapc5 protein_coding protein_coding MGP_WSBEiJ_T0072960.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125375809 125412048 - MGP_WSBEiJ_P0072960 Anapc5 protein_coding protein_coding MGP_WSBEiJ_T0072961.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125375811 125412041 - MGP_WSBEiJ_P0072961 Anapc5 protein_coding protein_coding MGP_WSBEiJ_T0072962.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125375819 125412055 - MGP_WSBEiJ_P0072962 Anapc5 protein_coding protein_coding MGP_WSBEiJ_T0072963.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125375895 125411911 - MGP_WSBEiJ_P0072963 Anapc5 protein_coding protein_coding MGP_WSBEiJ_T0072964.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125376003 125381640 - MGP_WSBEiJ_P0072964 Anapc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072965.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125376503 125387637 - Anapc5 protein_coding retained_intron MGP_WSBEiJ_T0072966.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125379937 125382592 - MGP_WSBEiJ_P0072966 Anapc5 protein_coding protein_coding MGP_WSBEiJ_T0072967.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125381561 125390373 - Anapc5 protein_coding retained_intron MGP_WSBEiJ_T0072968.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125387301 125395249 - MGP_WSBEiJ_P0072968 Anapc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072969.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125387376 125409345 - Anapc5 protein_coding processed_transcript MGP_WSBEiJ_T0072970.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125388001 125394257 - Anapc5 protein_coding retained_intron MGP_WSBEiJ_T0072971.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125388185 125412040 - Anapc5 protein_coding retained_intron MGP_WSBEiJ_T0072972.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125393750 125411779 - Anapc5 protein_coding retained_intron MGP_WSBEiJ_T0072973.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125395234 125412031 - MGP_WSBEiJ_P0072973 Anapc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072974.1 MGP_WSBEiJ_G0029235.1 mouse_genomes_project 5 125408618 125412036 - Anapc5 protein_coding processed_transcript MGP_WSBEiJ_T0074383.1 MGP_WSBEiJ_G0029490.1 mouse_genomes_project 5 146540966 146592119 - MGP_WSBEiJ_P0074383 Mmd2 protein_coding protein_coding MGP_WSBEiJ_T0074384.1 MGP_WSBEiJ_G0029490.1 mouse_genomes_project 5 146562186 146564062 - Mmd2 protein_coding retained_intron MGP_WSBEiJ_T0074385.1 MGP_WSBEiJ_G0029490.1 mouse_genomes_project 5 146563488 146592119 - Mmd2 protein_coding processed_transcript MGP_WSBEiJ_T0071506.1 MGP_WSBEiJ_G0028949.1 mouse_genomes_project 5 93703342 93712317 + MGP_WSBEiJ_P0071506 Ccng2 protein_coding protein_coding MGP_WSBEiJ_T0071507.1 MGP_WSBEiJ_G0028949.1 mouse_genomes_project 5 93703675 93704542 + Ccng2 protein_coding processed_transcript MGP_WSBEiJ_T0071508.1 MGP_WSBEiJ_G0028949.1 mouse_genomes_project 5 93703687 93705803 + Ccng2 protein_coding processed_transcript MGP_WSBEiJ_T0071509.1 MGP_WSBEiJ_G0028949.1 mouse_genomes_project 5 93703725 93712311 + Ccng2 protein_coding retained_intron MGP_WSBEiJ_T0071510.1 MGP_WSBEiJ_G0028949.1 mouse_genomes_project 5 93704400 93712310 + MGP_WSBEiJ_P0071510 Ccng2 protein_coding protein_coding MGP_WSBEiJ_T0071511.1 MGP_WSBEiJ_G0028949.1 mouse_genomes_project 5 93704794 93709566 + Ccng2 protein_coding retained_intron MGP_WSBEiJ_T0014686.1 MGP_WSBEiJ_G0012816.1 mouse_genomes_project 5 116628527 116629110 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001532.1 MGP_WSBEiJ_G0001456.1 mouse_genomes_project 5 47412944 47416398 + TEC TEC MGP_WSBEiJ_T0070550.1 MGP_WSBEiJ_G0028750.1 mouse_genomes_project 5 61777117 61863501 + MGP_WSBEiJ_P0070550 Dthd1 protein_coding protein_coding MGP_WSBEiJ_T0073594.1 MGP_WSBEiJ_G0029335.1 mouse_genomes_project 5 137864148 137866174 - MGP_WSBEiJ_P0073594 Syna protein_coding protein_coding MGP_WSBEiJ_T0072263.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115531283 115601809 - MGP_WSBEiJ_P0072263 Coro1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072264.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115531283 115601862 - MGP_WSBEiJ_P0072264 Coro1c protein_coding protein_coding MGP_WSBEiJ_T0072265.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115534074 115540825 - Coro1c protein_coding retained_intron MGP_WSBEiJ_T0072266.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115534085 115539835 - Coro1c protein_coding retained_intron MGP_WSBEiJ_T0072267.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115535020 115536453 - Coro1c protein_coding retained_intron MGP_WSBEiJ_T0072268.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115536940 115539640 - Coro1c protein_coding retained_intron MGP_WSBEiJ_T0072269.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115537345 115565602 - Coro1c protein_coding processed_transcript MGP_WSBEiJ_T0072270.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115537404 115548783 - Coro1c protein_coding processed_transcript MGP_WSBEiJ_T0072271.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115555667 115573794 - MGP_WSBEiJ_P0072271 Coro1c protein_coding protein_coding MGP_WSBEiJ_T0072272.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115555725 115573280 - MGP_WSBEiJ_P0072272 Coro1c protein_coding protein_coding MGP_WSBEiJ_T0072273.1 MGP_WSBEiJ_G0029106.1 mouse_genomes_project 5 115567916 115601749 - Coro1c protein_coding retained_intron MGP_WSBEiJ_T0001568.1 MGP_WSBEiJ_G0001492.1 mouse_genomes_project 5 56645751 56648471 + TEC TEC MGP_WSBEiJ_T0073055.1 MGP_WSBEiJ_G0029249.1 mouse_genomes_project 5 126140460 126168938 + MGP_WSBEiJ_P0073055 Lrrc43 protein_coding protein_coding MGP_WSBEiJ_T0073056.1 MGP_WSBEiJ_G0029249.1 mouse_genomes_project 5 126140485 126168933 + MGP_WSBEiJ_P0073056 Lrrc43 protein_coding protein_coding MGP_WSBEiJ_T0008341.1 MGP_WSBEiJ_G0006769.1 mouse_genomes_project 5 154476419 154477410 - Gm43452 lincRNA lincRNA MGP_WSBEiJ_T0098384.1 MGP_WSBEiJ_G0037047.1 mouse_genomes_project 5 125069668 125069769 + Gm22965 snRNA snRNA MGP_WSBEiJ_T0069617.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28914493 28940000 - Gtf3c2 protein_coding retained_intron MGP_WSBEiJ_T0069618.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28914493 28940012 - MGP_WSBEiJ_P0069618 Gtf3c2 protein_coding protein_coding MGP_WSBEiJ_T0069619.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28915009 28939985 - MGP_WSBEiJ_P0069619 Gtf3c2 protein_coding protein_coding MGP_WSBEiJ_T0069620.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28915932 28917870 - Gtf3c2 protein_coding retained_intron MGP_WSBEiJ_T0069621.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28917984 28924622 - Gtf3c2 protein_coding retained_intron MGP_WSBEiJ_T0069622.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28925621 28939777 - Gtf3c2 protein_coding retained_intron MGP_WSBEiJ_T0069623.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28932568 28939779 - Gtf3c2 protein_coding retained_intron MGP_WSBEiJ_T0069624.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28932888 28934376 - MGP_WSBEiJ_P0069624 Gtf3c2 protein_coding protein_coding MGP_WSBEiJ_T0069625.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28933265 28939779 - MGP_WSBEiJ_P0069625 Gtf3c2 protein_coding protein_coding MGP_WSBEiJ_T0069626.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28933678 28939717 - MGP_WSBEiJ_P0069626 Gtf3c2 protein_coding protein_coding MGP_WSBEiJ_T0069627.1 MGP_WSBEiJ_G0028603.1 mouse_genomes_project 5 28933795 28934696 - MGP_WSBEiJ_P0069627 Gtf3c2 protein_coding protein_coding MGP_WSBEiJ_T0069849.1 MGP_WSBEiJ_G0028635.1 mouse_genomes_project 5 31330290 31333533 - MGP_WSBEiJ_P0069849 Nkx1-1 protein_coding protein_coding MGP_WSBEiJ_T0100849.1 MGP_WSBEiJ_G0039307.1 mouse_genomes_project 5 14398383 14404289 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004759.1 MGP_WSBEiJ_G0004095.1 mouse_genomes_project 5 127527827 127528339 - Gm43777 antisense antisense MGP_WSBEiJ_T0098385.1 MGP_WSBEiJ_G0037048.1 mouse_genomes_project 5 125987186 125987355 + Gm23458 snRNA snRNA MGP_WSBEiJ_T0071268.1 MGP_WSBEiJ_G0028885.1 mouse_genomes_project 5 88097902 88138732 + MGP_WSBEiJ_P0071268 Gm28434 protein_coding protein_coding MGP_WSBEiJ_T0011403.1 MGP_WSBEiJ_G0009560.1 mouse_genomes_project 5 104462230 104462523 + Gm23085 misc_RNA misc_RNA MGP_WSBEiJ_T0014591.1 MGP_WSBEiJ_G0012721.1 mouse_genomes_project 5 74552148 74552437 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001666.1 MGP_WSBEiJ_G0001588.1 mouse_genomes_project 5 81909892 81911303 - TEC TEC MGP_WSBEiJ_T0001599.1 MGP_WSBEiJ_G0001522.1 mouse_genomes_project 5 64903593 64906071 + TEC TEC MGP_WSBEiJ_T0070984.1 MGP_WSBEiJ_G0028823.1 mouse_genomes_project 5 74432358 74482142 - MGP_WSBEiJ_P0070984 Chic2 protein_coding protein_coding MGP_WSBEiJ_T0070985.1 MGP_WSBEiJ_G0028823.1 mouse_genomes_project 5 74446481 74481680 - Chic2 protein_coding retained_intron MGP_WSBEiJ_T0014441.1 MGP_WSBEiJ_G0012571.1 mouse_genomes_project 5 16470576 16470817 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069164.1 MGP_WSBEiJ_G0028517.1 mouse_genomes_project 5 20335908 20336610 - MGP_WSBEiJ_P0069164 Rpl10 protein_coding protein_coding MGP_WSBEiJ_T0011632.1 MGP_WSBEiJ_G0009767.1 mouse_genomes_project 5 92763538 92769495 - MGP_WSBEiJ_P0011632 Cxcl11 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011633.1 MGP_WSBEiJ_G0009767.1 mouse_genomes_project 5 92763541 92767297 - MGP_WSBEiJ_P0011633 Cxcl11 polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0071444.1 MGP_WSBEiJ_G0009767.1 mouse_genomes_project 5 92764759 92769049 - MGP_WSBEiJ_P0071444 Cxcl11 polymorphic_pseudogene unknown_likely_coding MGP_WSBEiJ_T0071719.1 MGP_WSBEiJ_G0028991.1 mouse_genomes_project 5 104553791 104687696 + Aff1 protein_coding retained_intron MGP_WSBEiJ_T0071720.1 MGP_WSBEiJ_G0028991.1 mouse_genomes_project 5 104622022 104729331 + MGP_WSBEiJ_P0071720 Aff1 protein_coding protein_coding MGP_WSBEiJ_T0071721.1 MGP_WSBEiJ_G0028991.1 mouse_genomes_project 5 104622429 104713521 + MGP_WSBEiJ_P0071721 Aff1 protein_coding protein_coding MGP_WSBEiJ_T0071722.1 MGP_WSBEiJ_G0028991.1 mouse_genomes_project 5 104622438 104729331 + MGP_WSBEiJ_P0071722 Aff1 protein_coding protein_coding MGP_WSBEiJ_T0071723.1 MGP_WSBEiJ_G0028991.1 mouse_genomes_project 5 104653327 104682883 + Aff1 protein_coding retained_intron MGP_WSBEiJ_T0001662.1 MGP_WSBEiJ_G0001584.1 mouse_genomes_project 5 76204086 76206515 - TEC TEC MGP_WSBEiJ_T0074185.1 MGP_WSBEiJ_G0029448.1 mouse_genomes_project 5 142443143 142501861 + MGP_WSBEiJ_P0074185 Fam20c protein_coding protein_coding MGP_WSBEiJ_T0074186.1 MGP_WSBEiJ_G0029448.1 mouse_genomes_project 5 142443712 142501165 + MGP_WSBEiJ_P0074186 Fam20c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074187.1 MGP_WSBEiJ_G0029448.1 mouse_genomes_project 5 142443716 142447479 + Fam20c protein_coding retained_intron MGP_WSBEiJ_T0074188.1 MGP_WSBEiJ_G0029448.1 mouse_genomes_project 5 142476100 142500943 + Fam20c protein_coding processed_transcript MGP_WSBEiJ_T0074189.1 MGP_WSBEiJ_G0029448.1 mouse_genomes_project 5 142478369 142497044 + Fam20c protein_coding processed_transcript MGP_WSBEiJ_T0074190.1 MGP_WSBEiJ_G0029448.1 mouse_genomes_project 5 142496894 142501189 + Fam20c protein_coding retained_intron MGP_WSBEiJ_T0100852.1 MGP_WSBEiJ_G0039310.1 mouse_genomes_project 5 67799911 67828614 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004654.1 MGP_WSBEiJ_G0004026.1 mouse_genomes_project 5 92687748 92701692 + Gm43599 antisense antisense MGP_WSBEiJ_T0004722.1 MGP_WSBEiJ_G0004071.1 mouse_genomes_project 5 119993549 119997344 - Gm26995 antisense antisense MGP_WSBEiJ_T0070555.1 MGP_WSBEiJ_G0028752.1 mouse_genomes_project 5 62828397 62913121 + MGP_WSBEiJ_P0070555 0610040J01Rik protein_coding protein_coding MGP_WSBEiJ_T0070556.1 MGP_WSBEiJ_G0028752.1 mouse_genomes_project 5 62828554 62912063 + MGP_WSBEiJ_P0070556 0610040J01Rik protein_coding protein_coding MGP_WSBEiJ_T0070557.1 MGP_WSBEiJ_G0028752.1 mouse_genomes_project 5 62889318 62911762 + MGP_WSBEiJ_P0070557 0610040J01Rik protein_coding protein_coding MGP_WSBEiJ_T0070558.1 MGP_WSBEiJ_G0028752.1 mouse_genomes_project 5 62890486 62912025 + MGP_WSBEiJ_P0070558 0610040J01Rik protein_coding protein_coding MGP_WSBEiJ_T0007980.1 MGP_WSBEiJ_G0006510.1 mouse_genomes_project 5 37383397 37439657 - Gm43453 lincRNA lincRNA MGP_WSBEiJ_T0008170.1 MGP_WSBEiJ_G0006650.1 mouse_genomes_project 5 114158216 114158950 + Gm27004 lincRNA lincRNA MGP_WSBEiJ_T0001717.1 MGP_WSBEiJ_G0001639.1 mouse_genomes_project 5 112819827 112820634 - TEC TEC MGP_WSBEiJ_T0014715.1 MGP_WSBEiJ_G0012845.1 mouse_genomes_project 5 139033366 139038468 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072294.1 MGP_WSBEiJ_G0029111.1 mouse_genomes_project 5 115840887 115845167 - MGP_WSBEiJ_P0072294 Alkbh2 protein_coding protein_coding MGP_WSBEiJ_T0072295.1 MGP_WSBEiJ_G0029111.1 mouse_genomes_project 5 115840896 115845207 - MGP_WSBEiJ_P0072295 Alkbh2 protein_coding protein_coding MGP_WSBEiJ_T0072296.1 MGP_WSBEiJ_G0029111.1 mouse_genomes_project 5 115844596 115845172 - MGP_WSBEiJ_P0072296 Alkbh2 protein_coding protein_coding MGP_WSBEiJ_T0074882.1 MGP_WSBEiJ_G0029591.1 mouse_genomes_project 5 155722461 156098921 - MGP_WSBEiJ_P0074882 Gm42906 protein_coding protein_coding MGP_WSBEiJ_T0001503.1 MGP_WSBEiJ_G0001428.1 mouse_genomes_project 5 42972621 42974835 - TEC TEC MGP_WSBEiJ_T0068911.1 MGP_WSBEiJ_G0028473.1 mouse_genomes_project 5 4895417 4915237 + MGP_WSBEiJ_P0068911 Steap4 protein_coding protein_coding MGP_WSBEiJ_T0001416.1 MGP_WSBEiJ_G0001344.1 mouse_genomes_project 5 11099006 11100886 + TEC TEC MGP_WSBEiJ_T0070997.1 MGP_WSBEiJ_G0028826.1 mouse_genomes_project 5 75040322 75123520 + MGP_WSBEiJ_P0070997 Kit protein_coding protein_coding MGP_WSBEiJ_T0070998.1 MGP_WSBEiJ_G0028826.1 mouse_genomes_project 5 75040361 75123520 + MGP_WSBEiJ_P0070998 Kit protein_coding protein_coding MGP_WSBEiJ_T0070999.1 MGP_WSBEiJ_G0028826.1 mouse_genomes_project 5 75078319 75088689 + Kit protein_coding retained_intron MGP_WSBEiJ_T0071000.1 MGP_WSBEiJ_G0028826.1 mouse_genomes_project 5 75104811 75106721 + Kit protein_coding retained_intron MGP_WSBEiJ_T0071001.1 MGP_WSBEiJ_G0028826.1 mouse_genomes_project 5 75109805 75112776 + Kit protein_coding retained_intron MGP_WSBEiJ_T0071002.1 MGP_WSBEiJ_G0028826.1 mouse_genomes_project 5 75112488 75119654 + Kit protein_coding retained_intron MGP_WSBEiJ_T0071003.1 MGP_WSBEiJ_G0028826.1 mouse_genomes_project 5 75115876 75123492 + Kit protein_coding retained_intron MGP_WSBEiJ_T0071004.1 MGP_WSBEiJ_G0028826.1 mouse_genomes_project 5 75115975 75119095 + Kit protein_coding retained_intron MGP_WSBEiJ_T0073965.1 MGP_WSBEiJ_G0029405.1 mouse_genomes_project 5 141061803 141062791 - MGP_WSBEiJ_P0073965 Pop7 protein_coding protein_coding MGP_WSBEiJ_T0073966.1 MGP_WSBEiJ_G0029405.1 mouse_genomes_project 5 141061804 141062884 - MGP_WSBEiJ_P0073966 Pop7 protein_coding protein_coding MGP_WSBEiJ_T0070737.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 65948427 66196465 + Limch1 protein_coding retained_intron MGP_WSBEiJ_T0070738.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 65948467 65951005 + Limch1 protein_coding retained_intron MGP_WSBEiJ_T0070739.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 65948483 66278086 + MGP_WSBEiJ_P0070739 Limch1 protein_coding protein_coding MGP_WSBEiJ_T0070740.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 65948489 66174771 + MGP_WSBEiJ_P0070740 Limch1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070741.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 65948510 66279177 + MGP_WSBEiJ_P0070741 Limch1 protein_coding protein_coding MGP_WSBEiJ_T0070742.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66115878 66190964 + MGP_WSBEiJ_P0070742 Limch1 protein_coding protein_coding MGP_WSBEiJ_T0070743.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66189816 66276706 + Limch1 protein_coding processed_transcript MGP_WSBEiJ_T0070744.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66190227 66279168 + MGP_WSBEiJ_P0070744 Limch1 protein_coding protein_coding MGP_WSBEiJ_T0070745.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66190375 66255881 + Limch1 protein_coding retained_intron MGP_WSBEiJ_T0070746.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66190387 66221613 + MGP_WSBEiJ_P0070746 Limch1 protein_coding protein_coding MGP_WSBEiJ_T0070747.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66190460 66196718 + Limch1 protein_coding retained_intron MGP_WSBEiJ_T0070748.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66190771 66221643 + MGP_WSBEiJ_P0070748 Limch1 protein_coding protein_coding MGP_WSBEiJ_T0070749.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66198820 66222089 + Limch1 protein_coding processed_transcript MGP_WSBEiJ_T0070750.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66219949 66222194 + Limch1 protein_coding retained_intron MGP_WSBEiJ_T0070751.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66266357 66276658 + Limch1 protein_coding processed_transcript MGP_WSBEiJ_T0070752.1 MGP_WSBEiJ_G0028779.1 mouse_genomes_project 5 66266412 66276653 + MGP_WSBEiJ_P0070752 Limch1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098342.1 MGP_WSBEiJ_G0037005.1 mouse_genomes_project 5 50732954 50733059 - Gm25601 snRNA snRNA MGP_WSBEiJ_T0069613.1 MGP_WSBEiJ_G0028602.1 mouse_genomes_project 5 28900238 28916642 - Gm29609 protein_coding processed_transcript MGP_WSBEiJ_T0069616.1 MGP_WSBEiJ_G0028602.1 mouse_genomes_project 5 28909631 28939779 - MGP_WSBEiJ_P0069616 Gm29609 protein_coding protein_coding MGP_WSBEiJ_T0008215.1 MGP_WSBEiJ_G0006684.1 mouse_genomes_project 5 122160819 122164950 + Gm43277 lincRNA lincRNA MGP_WSBEiJ_T0014416.1 MGP_WSBEiJ_G0012546.1 mouse_genomes_project 5 3704828 3705394 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069442.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27888810 27925464 - MGP_WSBEiJ_P0069442 Hadha protein_coding protein_coding MGP_WSBEiJ_T0069443.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27889932 27925278 - Hadha protein_coding processed_transcript MGP_WSBEiJ_T0069444.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27890405 27890812 - Hadha protein_coding processed_transcript MGP_WSBEiJ_T0069445.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27891975 27897628 - Hadha protein_coding retained_intron MGP_WSBEiJ_T0069446.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27897244 27905549 - MGP_WSBEiJ_P0069446 Hadha protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069447.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27899223 27911534 - Hadha protein_coding retained_intron MGP_WSBEiJ_T0069448.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27903741 27925264 - Hadha protein_coding retained_intron MGP_WSBEiJ_T0069449.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27917578 27920043 - Hadha protein_coding retained_intron MGP_WSBEiJ_T0069450.1 MGP_WSBEiJ_G0028573.1 mouse_genomes_project 5 27924223 27925292 - Hadha protein_coding retained_intron MGP_WSBEiJ_T0001791.1 MGP_WSBEiJ_G0001712.1 mouse_genomes_project 5 130475845 130476619 + TEC TEC MGP_WSBEiJ_T0074319.1 MGP_WSBEiJ_G0029475.1 mouse_genomes_project 5 144266978 144290310 + MGP_WSBEiJ_P0074319 Eif3b protein_coding protein_coding MGP_WSBEiJ_T0074320.1 MGP_WSBEiJ_G0029475.1 mouse_genomes_project 5 144274741 144278336 + Eif3b protein_coding retained_intron MGP_WSBEiJ_T0074321.1 MGP_WSBEiJ_G0029475.1 mouse_genomes_project 5 144286888 144289648 + MGP_WSBEiJ_P0074321 Eif3b protein_coding protein_coding MGP_WSBEiJ_T0070365.1 MGP_WSBEiJ_G0028719.1 mouse_genomes_project 5 42690599 43042474 - MGP_WSBEiJ_P0070365 Ldb2 protein_coding protein_coding MGP_WSBEiJ_T0070366.1 MGP_WSBEiJ_G0028719.1 mouse_genomes_project 5 42690599 43042494 - MGP_WSBEiJ_P0070366 Ldb2 protein_coding protein_coding MGP_WSBEiJ_T0070367.1 MGP_WSBEiJ_G0028719.1 mouse_genomes_project 5 42690599 43042535 - MGP_WSBEiJ_P0070367 Ldb2 protein_coding protein_coding MGP_WSBEiJ_T0070368.1 MGP_WSBEiJ_G0028719.1 mouse_genomes_project 5 42690607 43042457 - MGP_WSBEiJ_P0070368 Ldb2 protein_coding protein_coding MGP_WSBEiJ_T0070369.1 MGP_WSBEiJ_G0028719.1 mouse_genomes_project 5 42699495 42821380 - Ldb2 protein_coding processed_transcript MGP_WSBEiJ_T0070370.1 MGP_WSBEiJ_G0028719.1 mouse_genomes_project 5 42750887 42760033 - Ldb2 protein_coding processed_transcript MGP_WSBEiJ_T0070371.1 MGP_WSBEiJ_G0028719.1 mouse_genomes_project 5 42766532 43042507 - Ldb2 protein_coding retained_intron MGP_WSBEiJ_T0001697.1 MGP_WSBEiJ_G0001619.1 mouse_genomes_project 5 104753473 104753796 - TEC TEC MGP_WSBEiJ_T0069951.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289072 32307861 + MGP_WSBEiJ_P0069951 Rnf4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0069952.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289103 32307856 + MGP_WSBEiJ_P0069952 Rnf4 protein_coding protein_coding MGP_WSBEiJ_T0069953.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289142 32304202 + Rnf4 protein_coding retained_intron MGP_WSBEiJ_T0069954.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289194 32307853 + MGP_WSBEiJ_P0069954 Rnf4 protein_coding protein_coding MGP_WSBEiJ_T0069955.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289204 32303740 + Rnf4 protein_coding processed_transcript MGP_WSBEiJ_T0069956.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289231 32299911 + Rnf4 protein_coding retained_intron MGP_WSBEiJ_T0069957.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289233 32295433 + Rnf4 protein_coding processed_transcript MGP_WSBEiJ_T0069958.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289238 32300203 + Rnf4 protein_coding retained_intron MGP_WSBEiJ_T0069959.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289260 32303575 + Rnf4 protein_coding retained_intron MGP_WSBEiJ_T0069960.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289499 32303737 + MGP_WSBEiJ_P0069960 Rnf4 protein_coding protein_coding MGP_WSBEiJ_T0069961.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32289746 32307841 + MGP_WSBEiJ_P0069961 Rnf4 protein_coding protein_coding MGP_WSBEiJ_T0069962.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32290133 32295469 + Rnf4 protein_coding processed_transcript MGP_WSBEiJ_T0069963.1 MGP_WSBEiJ_G0028652.1 mouse_genomes_project 5 32305532 32310047 + Rnf4 protein_coding retained_intron MGP_WSBEiJ_T0070489.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51260346 51295103 + MGP_WSBEiJ_P0070489 Anapc4 protein_coding protein_coding MGP_WSBEiJ_T0070490.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51260460 51294045 + MGP_WSBEiJ_P0070490 Anapc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070491.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51269010 51274918 + Anapc4 protein_coding retained_intron MGP_WSBEiJ_T0070492.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51269126 51276816 + MGP_WSBEiJ_P0070492 Anapc4 protein_coding protein_coding MGP_WSBEiJ_T0070493.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51269139 51276803 + MGP_WSBEiJ_P0070493 Anapc4 protein_coding protein_coding MGP_WSBEiJ_T0070494.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51273855 51274993 + Anapc4 protein_coding retained_intron MGP_WSBEiJ_T0070495.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51276440 51286501 + Anapc4 protein_coding retained_intron MGP_WSBEiJ_T0070496.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51281603 51283304 + Anapc4 protein_coding retained_intron MGP_WSBEiJ_T0070497.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51286393 51293299 + Anapc4 protein_coding retained_intron MGP_WSBEiJ_T0070498.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51288247 51289851 + Anapc4 protein_coding retained_intron MGP_WSBEiJ_T0070499.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51288489 51291957 + Anapc4 protein_coding retained_intron MGP_WSBEiJ_T0070500.1 MGP_WSBEiJ_G0028739.1 mouse_genomes_project 5 51292915 51294037 + Anapc4 protein_coding retained_intron MGP_WSBEiJ_T0001506.1 MGP_WSBEiJ_G0001431.1 mouse_genomes_project 5 43912779 43913786 - TEC TEC MGP_WSBEiJ_T0070133.1 MGP_WSBEiJ_G0028679.1 mouse_genomes_project 5 34534463 34538048 + MGP_WSBEiJ_P0070133 Ccdc96 protein_coding protein_coding MGP_WSBEiJ_T0001770.1 MGP_WSBEiJ_G0001692.1 mouse_genomes_project 5 125135960 125136521 - TEC TEC MGP_WSBEiJ_T0068971.1 MGP_WSBEiJ_G0028481.1 mouse_genomes_project 5 5846957 5916970 + MGP_WSBEiJ_P0068971 Abcb4 protein_coding protein_coding MGP_WSBEiJ_T0068972.1 MGP_WSBEiJ_G0028481.1 mouse_genomes_project 5 5846961 5854529 + Abcb4 protein_coding retained_intron MGP_WSBEiJ_T0068973.1 MGP_WSBEiJ_G0028481.1 mouse_genomes_project 5 5847189 5896470 + MGP_WSBEiJ_P0068973 Abcb4 protein_coding protein_coding MGP_WSBEiJ_T0068974.1 MGP_WSBEiJ_G0028481.1 mouse_genomes_project 5 5882719 5885989 + Abcb4 protein_coding retained_intron MGP_WSBEiJ_T0068975.1 MGP_WSBEiJ_G0028481.1 mouse_genomes_project 5 5915563 5916975 + Abcb4 protein_coding retained_intron MGP_WSBEiJ_T0001587.1 MGP_WSBEiJ_G0001510.1 mouse_genomes_project 5 64031522 64033820 + TEC TEC MGP_WSBEiJ_T0072574.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119126843 119290189 + MGP_WSBEiJ_P0072574 Taok3 protein_coding protein_coding MGP_WSBEiJ_T0072575.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119132994 119212632 + MGP_WSBEiJ_P0072575 Taok3 protein_coding protein_coding MGP_WSBEiJ_T0072576.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119140848 119204667 + Taok3 protein_coding retained_intron MGP_WSBEiJ_T0072577.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119140848 119290047 + MGP_WSBEiJ_P0072577 Taok3 protein_coding protein_coding MGP_WSBEiJ_T0072578.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119140855 119290191 + MGP_WSBEiJ_P0072578 Taok3 protein_coding protein_coding MGP_WSBEiJ_T0072579.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119140875 119251292 + Taok3 protein_coding retained_intron MGP_WSBEiJ_T0072580.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119140878 119263985 + MGP_WSBEiJ_P0072580 Taok3 protein_coding protein_coding MGP_WSBEiJ_T0072581.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119140901 119196139 + Taok3 protein_coding retained_intron MGP_WSBEiJ_T0072582.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119212613 119237800 + MGP_WSBEiJ_P0072582 Taok3 protein_coding protein_coding MGP_WSBEiJ_T0072583.1 MGP_WSBEiJ_G0029163.1 mouse_genomes_project 5 119250303 119286776 + MGP_WSBEiJ_P0072583 Taok3 protein_coding protein_coding MGP_WSBEiJ_T0007938.1 MGP_WSBEiJ_G0006486.1 mouse_genomes_project 5 23132629 23134081 + 1700096K18Rik lincRNA lincRNA MGP_WSBEiJ_T0001811.1 MGP_WSBEiJ_G0001732.1 mouse_genomes_project 5 134774191 134777061 - TEC TEC MGP_WSBEiJ_T0008073.1 MGP_WSBEiJ_G0006587.1 mouse_genomes_project 5 92416375 92429184 + Gm26582 lincRNA lincRNA MGP_WSBEiJ_T0004649.1 MGP_WSBEiJ_G0004022.1 mouse_genomes_project 5 88091940 88094808 + BC051076 antisense antisense MGP_WSBEiJ_T0004650.1 MGP_WSBEiJ_G0004022.1 mouse_genomes_project 5 88091940 88094805 + BC051076 antisense antisense MGP_WSBEiJ_T0069157.1 MGP_WSBEiJ_G0028515.1 mouse_genomes_project 5 19868336 19926775 - Orc5 protein_coding retained_intron MGP_WSBEiJ_T0069158.1 MGP_WSBEiJ_G0028515.1 mouse_genomes_project 5 19868340 19926846 - MGP_WSBEiJ_P0069158 Orc5 protein_coding protein_coding MGP_WSBEiJ_T0069159.1 MGP_WSBEiJ_G0028515.1 mouse_genomes_project 5 19894724 19898460 - Orc5 protein_coding retained_intron MGP_WSBEiJ_T0069160.1 MGP_WSBEiJ_G0028515.1 mouse_genomes_project 5 19899309 19925990 - MGP_WSBEiJ_P0069160 Orc5 protein_coding protein_coding MGP_WSBEiJ_T0069161.1 MGP_WSBEiJ_G0028515.1 mouse_genomes_project 5 19899344 19926846 - Orc5 protein_coding processed_transcript MGP_WSBEiJ_T0069162.1 MGP_WSBEiJ_G0028515.1 mouse_genomes_project 5 19922869 19926900 - Orc5 protein_coding processed_transcript MGP_WSBEiJ_T0070953.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73619379 73951643 - MGP_WSBEiJ_P0070953 Scfd2 protein_coding protein_coding MGP_WSBEiJ_T0070954.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73619647 73705572 - Scfd2 protein_coding processed_transcript MGP_WSBEiJ_T0070955.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73620645 73640765 - Scfd2 protein_coding retained_intron MGP_WSBEiJ_T0070956.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73620648 73951646 - MGP_WSBEiJ_P0070956 Scfd2 protein_coding protein_coding MGP_WSBEiJ_T0070957.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73816820 73819411 - MGP_WSBEiJ_P0070957 Scfd2 protein_coding protein_coding MGP_WSBEiJ_T0070958.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73871316 73951623 - MGP_WSBEiJ_P0070958 Scfd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070959.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73879796 73951653 - MGP_WSBEiJ_P0070959 Scfd2 protein_coding protein_coding MGP_WSBEiJ_T0070960.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73881909 73904459 - Scfd2 protein_coding retained_intron MGP_WSBEiJ_T0070961.1 MGP_WSBEiJ_G0028820.1 mouse_genomes_project 5 73935361 73951636 - Scfd2 protein_coding processed_transcript MGP_WSBEiJ_T0071206.1 MGP_WSBEiJ_G0028868.1 mouse_genomes_project 5 87254157 87271359 - MGP_WSBEiJ_P0071206 protein_coding protein_coding MGP_WSBEiJ_T0008232.1 MGP_WSBEiJ_G0006693.1 mouse_genomes_project 5 126817958 126819117 - Gm16001 lincRNA lincRNA MGP_WSBEiJ_T0008233.1 MGP_WSBEiJ_G0006693.1 mouse_genomes_project 5 126817987 126819070 - Gm16001 lincRNA lincRNA MGP_WSBEiJ_T0073275.1 MGP_WSBEiJ_G0029283.1 mouse_genomes_project 5 127728380 127737667 + MGP_WSBEiJ_P0073275 Fam101a protein_coding protein_coding MGP_WSBEiJ_T0073276.1 MGP_WSBEiJ_G0029283.1 mouse_genomes_project 5 127728634 127737666 + MGP_WSBEiJ_P0073276 Fam101a protein_coding protein_coding MGP_WSBEiJ_T0073277.1 MGP_WSBEiJ_G0029283.1 mouse_genomes_project 5 127735229 127736610 + Fam101a protein_coding processed_transcript MGP_WSBEiJ_T0001654.1 MGP_WSBEiJ_G0001576.1 mouse_genomes_project 5 73787137 73789890 - TEC TEC MGP_WSBEiJ_T0004720.1 MGP_WSBEiJ_G0004070.1 mouse_genomes_project 5 119327208 119327956 - Gm10399 antisense antisense MGP_WSBEiJ_T0004721.1 MGP_WSBEiJ_G0004070.1 mouse_genomes_project 5 119327456 119327954 - Gm10399 antisense antisense MGP_WSBEiJ_T0071426.1 MGP_WSBEiJ_G0028935.1 mouse_genomes_project 5 92672635 92709000 - MGP_WSBEiJ_P0071426 Sdad1 protein_coding protein_coding MGP_WSBEiJ_T0071427.1 MGP_WSBEiJ_G0028935.1 mouse_genomes_project 5 92681612 92708870 - MGP_WSBEiJ_P0071427 Sdad1 protein_coding protein_coding MGP_WSBEiJ_T0071428.1 MGP_WSBEiJ_G0028935.1 mouse_genomes_project 5 92689803 92695119 - Sdad1 protein_coding retained_intron MGP_WSBEiJ_T0071429.1 MGP_WSBEiJ_G0028935.1 mouse_genomes_project 5 92690630 92699247 - Sdad1 protein_coding retained_intron MGP_WSBEiJ_T0071430.1 MGP_WSBEiJ_G0028935.1 mouse_genomes_project 5 92700565 92708965 - Sdad1 protein_coding retained_intron MGP_WSBEiJ_T0071431.1 MGP_WSBEiJ_G0028935.1 mouse_genomes_project 5 92702578 92703632 - Sdad1 protein_coding retained_intron MGP_WSBEiJ_T0071432.1 MGP_WSBEiJ_G0028935.1 mouse_genomes_project 5 92704708 92709456 - MGP_WSBEiJ_P0071432 Sdad1 protein_coding protein_coding MGP_WSBEiJ_T0070826.1 MGP_WSBEiJ_G0028795.1 mouse_genomes_project 5 70699278 70804414 - protein_coding processed_transcript MGP_WSBEiJ_T0070827.1 MGP_WSBEiJ_G0028795.1 mouse_genomes_project 5 70699433 70699665 - protein_coding transcribed_processed_pseudogene MGP_WSBEiJ_T0001659.1 MGP_WSBEiJ_G0001581.1 mouse_genomes_project 5 75209058 75211379 + TEC TEC MGP_WSBEiJ_T0068903.1 MGP_WSBEiJ_G0028470.1 mouse_genomes_project 5 2685898 2699235 - MGP_WSBEiJ_P0068903 Steap1 protein_coding protein_coding MGP_WSBEiJ_T0068904.1 MGP_WSBEiJ_G0028470.1 mouse_genomes_project 5 2685906 2689979 - MGP_WSBEiJ_P0068904 Steap1 protein_coding protein_coding MGP_WSBEiJ_T0014766.1 MGP_WSBEiJ_G0012896.1 mouse_genomes_project 5 154049155 154049705 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014550.1 MGP_WSBEiJ_G0012680.1 mouse_genomes_project 5 57796084 57796778 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001423.1 MGP_WSBEiJ_G0001351.1 mouse_genomes_project 5 11916610 11918271 + TEC TEC MGP_WSBEiJ_T0001617.1 MGP_WSBEiJ_G0001540.1 mouse_genomes_project 5 65921604 65923171 + TEC TEC MGP_WSBEiJ_T0004587.1 MGP_WSBEiJ_G0003972.1 mouse_genomes_project 5 32655397 32682065 - Gm42560 antisense antisense MGP_WSBEiJ_T0001549.1 MGP_WSBEiJ_G0001473.1 mouse_genomes_project 5 50249206 50254242 - TEC TEC MGP_WSBEiJ_T0072482.1 MGP_WSBEiJ_G0029149.1 mouse_genomes_project 5 117344475 117352656 + MGP_WSBEiJ_P0072482 Pla2g1b protein_coding protein_coding MGP_WSBEiJ_T0072483.1 MGP_WSBEiJ_G0029149.1 mouse_genomes_project 5 117344479 117352644 + Pla2g1b protein_coding processed_transcript MGP_WSBEiJ_T0072484.1 MGP_WSBEiJ_G0029149.1 mouse_genomes_project 5 117344479 117352670 + MGP_WSBEiJ_P0072484 Pla2g1b protein_coding protein_coding MGP_WSBEiJ_T0072485.1 MGP_WSBEiJ_G0029149.1 mouse_genomes_project 5 117344485 117352509 + MGP_WSBEiJ_P0072485 Pla2g1b protein_coding protein_coding MGP_WSBEiJ_T0072486.1 MGP_WSBEiJ_G0029149.1 mouse_genomes_project 5 117344485 117349803 + MGP_WSBEiJ_P0072486 Pla2g1b protein_coding protein_coding MGP_WSBEiJ_T0069677.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29012769 29014276 + Krtcap3 protein_coding retained_intron MGP_WSBEiJ_T0069678.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29012784 29014276 + MGP_WSBEiJ_P0069678 Krtcap3 protein_coding protein_coding MGP_WSBEiJ_T0069679.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29012794 29013970 + Krtcap3 protein_coding retained_intron MGP_WSBEiJ_T0069680.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29012800 29014281 + MGP_WSBEiJ_P0069680 Krtcap3 protein_coding protein_coding MGP_WSBEiJ_T0069681.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29012803 29014276 + MGP_WSBEiJ_P0069681 Krtcap3 protein_coding protein_coding MGP_WSBEiJ_T0069682.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29012840 29013777 + Krtcap3 protein_coding retained_intron MGP_WSBEiJ_T0069683.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29013005 29014075 + Krtcap3 protein_coding retained_intron MGP_WSBEiJ_T0069684.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29013414 29014278 + Krtcap3 protein_coding retained_intron MGP_WSBEiJ_T0069685.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29013558 29014276 + Krtcap3 protein_coding retained_intron MGP_WSBEiJ_T0069686.1 MGP_WSBEiJ_G0028610.1 mouse_genomes_project 5 29013633 29014276 + Krtcap3 protein_coding retained_intron MGP_WSBEiJ_T0014414.1 MGP_WSBEiJ_G0012544.1 mouse_genomes_project 5 3326540 3326895 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100369.1 MGP_WSBEiJ_G0038837.1 mouse_genomes_project 5 92328230 92332522 + unitary_pseudogene retained_intron MGP_WSBEiJ_T0100370.1 MGP_WSBEiJ_G0038837.1 mouse_genomes_project 5 92328731 92336955 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100371.1 MGP_WSBEiJ_G0038837.1 mouse_genomes_project 5 92328745 92337874 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100372.1 MGP_WSBEiJ_G0038837.1 mouse_genomes_project 5 92329174 92339366 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0072613.1 MGP_WSBEiJ_G0029170.1 mouse_genomes_project 5 120039100 120072766 + MGP_WSBEiJ_P0072613 Fbxo21 protein_coding protein_coding MGP_WSBEiJ_T0072614.1 MGP_WSBEiJ_G0029170.1 mouse_genomes_project 5 120039144 120050254 + Fbxo21 protein_coding retained_intron MGP_WSBEiJ_T0072615.1 MGP_WSBEiJ_G0029170.1 mouse_genomes_project 5 120039154 120072765 + MGP_WSBEiJ_P0072615 Fbxo21 protein_coding protein_coding MGP_WSBEiJ_T0072616.1 MGP_WSBEiJ_G0029170.1 mouse_genomes_project 5 120039198 120072767 + MGP_WSBEiJ_P0072616 Fbxo21 protein_coding protein_coding MGP_WSBEiJ_T0072617.1 MGP_WSBEiJ_G0029170.1 mouse_genomes_project 5 120039684 120048907 + Fbxo21 protein_coding processed_transcript MGP_WSBEiJ_T0072618.1 MGP_WSBEiJ_G0029170.1 mouse_genomes_project 5 120042002 120048793 + Fbxo21 protein_coding processed_transcript MGP_WSBEiJ_T0014500.1 MGP_WSBEiJ_G0012630.1 mouse_genomes_project 5 30709116 30709402 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008025.1 MGP_WSBEiJ_G0006548.1 mouse_genomes_project 5 63742673 63745738 - Gm26761 lincRNA lincRNA MGP_WSBEiJ_T0014579.1 MGP_WSBEiJ_G0012709.1 mouse_genomes_project 5 68731043 68731635 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073327.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130454728 130476270 - MGP_WSBEiJ_P0073327 Slc15a4 protein_coding protein_coding MGP_WSBEiJ_T0073328.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130454731 130476080 - MGP_WSBEiJ_P0073328 Slc15a4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073329.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130454731 130476272 - MGP_WSBEiJ_P0073329 Slc15a4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073330.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130455720 130463527 - MGP_WSBEiJ_P0073330 Slc15a4 protein_coding protein_coding MGP_WSBEiJ_T0073331.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130460777 130491500 - MGP_WSBEiJ_P0073331 Slc15a4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073332.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130462628 130463454 - Slc15a4 protein_coding processed_transcript MGP_WSBEiJ_T0073333.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130462628 130463454 - Slc15a4 protein_coding processed_transcript MGP_WSBEiJ_T0073334.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130462654 130468199 - MGP_WSBEiJ_P0073334 Slc15a4 protein_coding protein_coding MGP_WSBEiJ_T0073335.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130463452 130475737 - Slc15a4 protein_coding processed_transcript MGP_WSBEiJ_T0073336.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130467640 130491517 - MGP_WSBEiJ_P0073336 Slc15a4 protein_coding protein_coding MGP_WSBEiJ_T0073337.1 MGP_WSBEiJ_G0029293.1 mouse_genomes_project 5 130473296 130476235 - Slc15a4 protein_coding retained_intron MGP_WSBEiJ_T0069204.1 MGP_WSBEiJ_G0028522.1 mouse_genomes_project 5 21339036 21345576 - MGP_WSBEiJ_P0069204 Tomm7 protein_coding protein_coding MGP_WSBEiJ_T0014638.1 MGP_WSBEiJ_G0012768.1 mouse_genomes_project 5 99080269 99080650 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014616.1 MGP_WSBEiJ_G0012746.1 mouse_genomes_project 5 88204177 88206035 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008035.1 MGP_WSBEiJ_G0006555.1 mouse_genomes_project 5 73346371 73348351 + C78283 lincRNA lincRNA MGP_WSBEiJ_T0004805.1 MGP_WSBEiJ_G0004129.1 mouse_genomes_project 5 148305662 148310479 - 2900089D17Rik antisense antisense MGP_WSBEiJ_T0004806.1 MGP_WSBEiJ_G0004129.1 mouse_genomes_project 5 148305749 148320129 - 2900089D17Rik antisense antisense MGP_WSBEiJ_T0004723.1 MGP_WSBEiJ_G0004072.1 mouse_genomes_project 5 120134004 120138358 + Gm9754 antisense antisense MGP_WSBEiJ_T0004733.1 MGP_WSBEiJ_G0004076.1 mouse_genomes_project 5 122716628 122717687 - Gm15690 antisense antisense MGP_WSBEiJ_T0074736.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152393903 152775100 + MGP_WSBEiJ_P0074736 Mtus2 protein_coding protein_coding MGP_WSBEiJ_T0074737.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152393925 152517042 + MGP_WSBEiJ_P0074737 Mtus2 protein_coding protein_coding MGP_WSBEiJ_T0074738.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152523368 152687595 + Mtus2 protein_coding retained_intron MGP_WSBEiJ_T0074739.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152537852 152660111 + Mtus2 protein_coding processed_transcript MGP_WSBEiJ_T0074740.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152690378 152693564 + Mtus2 protein_coding retained_intron MGP_WSBEiJ_T0074741.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152720151 152772577 + MGP_WSBEiJ_P0074741 Mtus2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074742.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152720239 152775097 + MGP_WSBEiJ_P0074742 Mtus2 protein_coding protein_coding MGP_WSBEiJ_T0074743.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152760597 152772485 + MGP_WSBEiJ_P0074743 Mtus2 protein_coding protein_coding MGP_WSBEiJ_T0074744.1 MGP_WSBEiJ_G0029569.1 mouse_genomes_project 5 152760606 152773026 + MGP_WSBEiJ_P0074744 Mtus2 protein_coding protein_coding MGP_WSBEiJ_T0014534.1 MGP_WSBEiJ_G0012664.1 mouse_genomes_project 5 49269643 49270208 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071743.1 MGP_WSBEiJ_G0028997.1 mouse_genomes_project 5 104967737 105005004 - MGP_WSBEiJ_P0071743 Sparcl1 protein_coding protein_coding MGP_WSBEiJ_T0071744.1 MGP_WSBEiJ_G0028997.1 mouse_genomes_project 5 104981576 105004710 - MGP_WSBEiJ_P0071744 Sparcl1 protein_coding protein_coding MGP_WSBEiJ_T0014419.1 MGP_WSBEiJ_G0012549.1 mouse_genomes_project 5 4801598 4802338 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098361.1 MGP_WSBEiJ_G0037024.1 mouse_genomes_project 5 86043689 86043859 + Gm24524 snRNA snRNA MGP_WSBEiJ_T0097417.1 MGP_WSBEiJ_G0036091.1 mouse_genomes_project 5 101576650 101577070 - Gm43514 sense_intronic sense_intronic MGP_WSBEiJ_T0071732.1 MGP_WSBEiJ_G0028994.1 mouse_genomes_project 5 104870038 104906650 - MGP_WSBEiJ_P0071732 Hsd17b11 protein_coding protein_coding MGP_WSBEiJ_T0071733.1 MGP_WSBEiJ_G0028994.1 mouse_genomes_project 5 104885704 104906569 - MGP_WSBEiJ_P0071733 Hsd17b11 protein_coding protein_coding MGP_WSBEiJ_T0001410.1 MGP_WSBEiJ_G0001338.1 mouse_genomes_project 5 10118933 10121433 - TEC TEC MGP_WSBEiJ_T0014462.1 MGP_WSBEiJ_G0012592.1 mouse_genomes_project 5 20336015 20336602 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001687.1 MGP_WSBEiJ_G0001609.1 mouse_genomes_project 5 101168809 101170648 + TEC TEC MGP_WSBEiJ_T0001605.1 MGP_WSBEiJ_G0001528.1 mouse_genomes_project 5 65107039 65109463 + TEC TEC MGP_WSBEiJ_T0071055.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76442112 76476592 - MGP_WSBEiJ_P0071055 Aasdh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071056.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76444396 76445129 - Aasdh protein_coding processed_transcript MGP_WSBEiJ_T0071057.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76444396 76476679 - MGP_WSBEiJ_P0071057 Aasdh protein_coding protein_coding MGP_WSBEiJ_T0071058.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76444401 76476678 - MGP_WSBEiJ_P0071058 Aasdh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071059.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76444447 76473538 - MGP_WSBEiJ_P0071059 Aasdh protein_coding protein_coding MGP_WSBEiJ_T0071060.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76444629 76451505 - MGP_WSBEiJ_P0071060 Aasdh protein_coding protein_coding MGP_WSBEiJ_T0071061.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76448663 76476657 - Aasdh protein_coding retained_intron MGP_WSBEiJ_T0071062.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76451961 76476652 - MGP_WSBEiJ_P0071062 Aasdh protein_coding protein_coding MGP_WSBEiJ_T0071063.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76451976 76453766 - Aasdh protein_coding retained_intron MGP_WSBEiJ_T0071064.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76463977 76466424 - Aasdh protein_coding retained_intron MGP_WSBEiJ_T0071065.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76465795 76476657 - Aasdh protein_coding processed_transcript MGP_WSBEiJ_T0071066.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76467598 76476657 - Aasdh protein_coding retained_intron MGP_WSBEiJ_T0071067.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76473356 76476555 - MGP_WSBEiJ_P0071067 Aasdh protein_coding protein_coding MGP_WSBEiJ_T0071068.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76473445 76476668 - MGP_WSBEiJ_P0071068 Aasdh protein_coding protein_coding MGP_WSBEiJ_T0071069.1 MGP_WSBEiJ_G0028836.1 mouse_genomes_project 5 76475493 76476593 - Aasdh protein_coding processed_transcript MGP_WSBEiJ_T0014627.1 MGP_WSBEiJ_G0012757.1 mouse_genomes_project 5 92078178 92078556 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014606.1 MGP_WSBEiJ_G0012736.1 mouse_genomes_project 5 84567948 84569062 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069115.1 MGP_WSBEiJ_G0028507.1 mouse_genomes_project 5 18904373 18913266 + Lrrc17 protein_coding processed_transcript MGP_WSBEiJ_T0069116.1 MGP_WSBEiJ_G0028507.1 mouse_genomes_project 5 18904377 18937486 + MGP_WSBEiJ_P0069116 Lrrc17 protein_coding protein_coding MGP_WSBEiJ_T0008030.1 MGP_WSBEiJ_G0006552.1 mouse_genomes_project 5 72632969 72639372 + Gm34411 lincRNA lincRNA MGP_WSBEiJ_T0074495.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949907 147974517 + Pms2 protein_coding retained_intron MGP_WSBEiJ_T0074496.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949907 147974517 + Pms2 protein_coding processed_transcript MGP_WSBEiJ_T0074497.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949907 147974517 + MGP_WSBEiJ_P0074497 Pms2 protein_coding protein_coding MGP_WSBEiJ_T0074498.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949933 147971766 + Pms2 protein_coding processed_transcript MGP_WSBEiJ_T0074499.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949933 147972003 + Pms2 protein_coding processed_transcript MGP_WSBEiJ_T0074500.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949942 147957613 + Pms2 protein_coding processed_transcript MGP_WSBEiJ_T0074501.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949947 147954709 + Pms2 protein_coding processed_transcript MGP_WSBEiJ_T0074502.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949968 147966815 + Pms2 protein_coding retained_intron MGP_WSBEiJ_T0074503.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147949968 147954246 + Pms2 protein_coding retained_intron MGP_WSBEiJ_T0074504.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147950000 147971720 + MGP_WSBEiJ_P0074504 Pms2 protein_coding protein_coding MGP_WSBEiJ_T0074505.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147950104 147953415 + Pms2 protein_coding processed_transcript MGP_WSBEiJ_T0074506.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147953272 147953867 + Pms2 protein_coding retained_intron MGP_WSBEiJ_T0074507.1 MGP_WSBEiJ_G0029515.1 mouse_genomes_project 5 147959533 147965424 + MGP_WSBEiJ_P0074507 Pms2 protein_coding protein_coding MGP_WSBEiJ_T0001441.1 MGP_WSBEiJ_G0001368.1 mouse_genomes_project 5 24851646 24854554 + TEC TEC MGP_WSBEiJ_T0071883.1 MGP_WSBEiJ_G0029031.1 mouse_genomes_project 5 108936947 108938625 + MGP_WSBEiJ_P0071883 Ube2d2b protein_coding protein_coding MGP_WSBEiJ_T0099604.1 MGP_WSBEiJ_G0038267.1 mouse_genomes_project 5 83613890 83614018 - Gm24792 snoRNA snoRNA MGP_WSBEiJ_T0070172.1 MGP_WSBEiJ_G0028686.1 mouse_genomes_project 5 35013567 35036551 - MGP_WSBEiJ_P0070172 Wfs1 protein_coding protein_coding MGP_WSBEiJ_T0070173.1 MGP_WSBEiJ_G0028686.1 mouse_genomes_project 5 35013570 35036279 - MGP_WSBEiJ_P0070173 Wfs1 protein_coding protein_coding MGP_WSBEiJ_T0070174.1 MGP_WSBEiJ_G0028686.1 mouse_genomes_project 5 35015970 35024426 - MGP_WSBEiJ_P0070174 Wfs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099614.1 MGP_WSBEiJ_G0038277.1 mouse_genomes_project 5 101588550 101588684 + Gm26286 snoRNA snoRNA MGP_WSBEiJ_T0001466.1 MGP_WSBEiJ_G0001391.1 mouse_genomes_project 5 31664512 31668090 - TEC TEC MGP_WSBEiJ_T0001818.1 MGP_WSBEiJ_G0001739.1 mouse_genomes_project 5 135124249 135128084 - TEC TEC MGP_WSBEiJ_T0007970.1 MGP_WSBEiJ_G0006505.1 mouse_genomes_project 5 35240087 35254858 + lincRNA lincRNA MGP_WSBEiJ_T0007971.1 MGP_WSBEiJ_G0006505.1 mouse_genomes_project 5 35244610 35253557 + lincRNA lincRNA MGP_WSBEiJ_T0071301.1 MGP_WSBEiJ_G0028901.1 mouse_genomes_project 5 88975790 88995979 + MGP_WSBEiJ_P0071301 Dck protein_coding protein_coding MGP_WSBEiJ_T0071302.1 MGP_WSBEiJ_G0028901.1 mouse_genomes_project 5 88980199 88981019 + Dck protein_coding retained_intron MGP_WSBEiJ_T0001473.1 MGP_WSBEiJ_G0001398.1 mouse_genomes_project 5 33559641 33560287 - TEC TEC MGP_WSBEiJ_T0014671.1 MGP_WSBEiJ_G0012801.1 mouse_genomes_project 5 110172682 110175781 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001657.1 MGP_WSBEiJ_G0001579.1 mouse_genomes_project 5 74456420 74459266 - TEC TEC MGP_WSBEiJ_T0001477.1 MGP_WSBEiJ_G0001402.1 mouse_genomes_project 5 36110729 36111024 - TEC TEC MGP_WSBEiJ_T0014720.1 MGP_WSBEiJ_G0012850.1 mouse_genomes_project 5 140849546 140849793 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014528.1 MGP_WSBEiJ_G0012658.1 mouse_genomes_project 5 46286889 46287180 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008124.1 MGP_WSBEiJ_G0006625.1 mouse_genomes_project 5 107519322 107524528 - Gm26872 lincRNA lincRNA MGP_WSBEiJ_T0008075.1 MGP_WSBEiJ_G0006589.1 mouse_genomes_project 5 97400336 97404789 + 1700016F12Rik lincRNA lincRNA MGP_WSBEiJ_T0014506.1 MGP_WSBEiJ_G0012636.1 mouse_genomes_project 5 31997435 31997892 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004556.1 MGP_WSBEiJ_G0003946.1 mouse_genomes_project 5 11613046 11633056 - Gm26918 antisense antisense MGP_WSBEiJ_T0098335.1 MGP_WSBEiJ_G0036998.1 mouse_genomes_project 5 30790350 30790450 + Gm24003 snRNA snRNA MGP_WSBEiJ_T0014739.1 MGP_WSBEiJ_G0012869.1 mouse_genomes_project 5 146851870 146852454 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069377.1 MGP_WSBEiJ_G0028559.1 mouse_genomes_project 5 25884798 25927788 - MGP_WSBEiJ_P0069377 protein_coding protein_coding MGP_WSBEiJ_T0069378.1 MGP_WSBEiJ_G0028559.1 mouse_genomes_project 5 25886428 25894437 - MGP_WSBEiJ_P0069378 protein_coding protein_coding MGP_WSBEiJ_T0069379.1 MGP_WSBEiJ_G0028559.1 mouse_genomes_project 5 25889447 25919865 - MGP_WSBEiJ_P0069379 protein_coding protein_coding MGP_WSBEiJ_T0069380.1 MGP_WSBEiJ_G0028559.1 mouse_genomes_project 5 25889755 25894583 - MGP_WSBEiJ_P0069380 protein_coding protein_coding MGP_WSBEiJ_T0069381.1 MGP_WSBEiJ_G0028559.1 mouse_genomes_project 5 25893659 25894778 - MGP_WSBEiJ_P0069381 protein_coding protein_coding MGP_WSBEiJ_T0011408.1 MGP_WSBEiJ_G0009565.1 mouse_genomes_project 5 113770780 113770854 - Gm27882 misc_RNA misc_RNA MGP_WSBEiJ_T0001559.1 MGP_WSBEiJ_G0001483.1 mouse_genomes_project 5 53346700 53349398 + TEC TEC MGP_WSBEiJ_T0008274.1 MGP_WSBEiJ_G0006717.1 mouse_genomes_project 5 136747361 136809794 - Gm42624 lincRNA lincRNA MGP_WSBEiJ_T0014561.1 MGP_WSBEiJ_G0012691.1 mouse_genomes_project 5 60525657 60526126 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004618.1 MGP_WSBEiJ_G0003995.1 mouse_genomes_project 5 52046977 52047950 - Gm42747 antisense antisense MGP_WSBEiJ_T0072110.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112248161 112273730 - MGP_WSBEiJ_P0072110 Ulk1 protein_coding protein_coding MGP_WSBEiJ_T0072111.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112249667 112251614 - MGP_WSBEiJ_P0072111 Ulk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072112.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112249689 112252722 - MGP_WSBEiJ_P0072112 Ulk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072113.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112249706 112250889 - Ulk1 protein_coding retained_intron MGP_WSBEiJ_T0072114.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112249761 112273686 - MGP_WSBEiJ_P0072114 Ulk1 protein_coding protein_coding MGP_WSBEiJ_T0072115.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112251559 112252336 - Ulk1 protein_coding retained_intron MGP_WSBEiJ_T0072116.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112251925 112253135 - Ulk1 protein_coding retained_intron MGP_WSBEiJ_T0072117.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112255068 112255863 - Ulk1 protein_coding retained_intron MGP_WSBEiJ_T0072118.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112255343 112257077 - Ulk1 protein_coding retained_intron MGP_WSBEiJ_T0072119.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112256066 112259468 - Ulk1 protein_coding processed_transcript MGP_WSBEiJ_T0072120.1 MGP_WSBEiJ_G0029074.1 mouse_genomes_project 5 112257272 112259505 - Ulk1 protein_coding retained_intron MGP_WSBEiJ_T0072644.1 MGP_WSBEiJ_G0029177.1 mouse_genomes_project 5 121854545 121857545 + Tbx3 protein_coding retained_intron MGP_WSBEiJ_T0072645.1 MGP_WSBEiJ_G0029177.1 mouse_genomes_project 5 121854545 121868416 + MGP_WSBEiJ_P0072645 Tbx3 protein_coding protein_coding MGP_WSBEiJ_T0072646.1 MGP_WSBEiJ_G0029177.1 mouse_genomes_project 5 121854738 121868578 + MGP_WSBEiJ_P0072646 Tbx3 protein_coding protein_coding MGP_WSBEiJ_T0072647.1 MGP_WSBEiJ_G0029177.1 mouse_genomes_project 5 121854894 121868578 + MGP_WSBEiJ_P0072647 Tbx3 protein_coding protein_coding MGP_WSBEiJ_T0072648.1 MGP_WSBEiJ_G0029177.1 mouse_genomes_project 5 121859326 121864492 + Tbx3 protein_coding retained_intron MGP_WSBEiJ_T0072649.1 MGP_WSBEiJ_G0029177.1 mouse_genomes_project 5 121864110 121864694 + Tbx3 protein_coding processed_transcript MGP_WSBEiJ_T0001794.1 MGP_WSBEiJ_G0001715.1 mouse_genomes_project 5 131419566 131420972 + TEC TEC MGP_WSBEiJ_T0097400.1 MGP_WSBEiJ_G0036074.1 mouse_genomes_project 5 932416 934303 + Gm43031 sense_intronic sense_intronic MGP_WSBEiJ_T0097401.1 MGP_WSBEiJ_G0036075.1 mouse_genomes_project 5 1721848 1724943 - Gm43112 sense_intronic sense_intronic MGP_WSBEiJ_T0074065.1 MGP_WSBEiJ_G0029422.1 mouse_genomes_project 5 141378170 141412903 + MGP_WSBEiJ_P0074065 protein_coding unknown_likely_coding MGP_WSBEiJ_T0074066.1 MGP_WSBEiJ_G0029422.1 mouse_genomes_project 5 141383491 141386696 + protein_coding retained_intron MGP_WSBEiJ_T0074067.1 MGP_WSBEiJ_G0029422.1 mouse_genomes_project 5 141391723 141393586 + protein_coding retained_intron MGP_WSBEiJ_T0074068.1 MGP_WSBEiJ_G0029422.1 mouse_genomes_project 5 141391952 141405147 + protein_coding processed_transcript MGP_WSBEiJ_T0074069.1 MGP_WSBEiJ_G0029422.1 mouse_genomes_project 5 141404364 141412605 + MGP_WSBEiJ_P0074069 protein_coding protein_coding MGP_WSBEiJ_T0004553.1 MGP_WSBEiJ_G0003943.1 mouse_genomes_project 5 4970601 4987221 - Gm15731 antisense antisense MGP_WSBEiJ_T0014451.1 MGP_WSBEiJ_G0012581.1 mouse_genomes_project 5 19065377 19066018 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099600.1 MGP_WSBEiJ_G0038263.1 mouse_genomes_project 5 73503951 73504072 + Snora26 snoRNA snoRNA MGP_WSBEiJ_T0008081.1 MGP_WSBEiJ_G0006595.1 mouse_genomes_project 5 97765760 97778079 + Gm2861 lincRNA lincRNA MGP_WSBEiJ_T0069441.1 MGP_WSBEiJ_G0028572.1 mouse_genomes_project 5 27874774 27888885 + MGP_WSBEiJ_P0069441 Gareml protein_coding protein_coding MGP_WSBEiJ_T0001462.1 MGP_WSBEiJ_G0001387.1 mouse_genomes_project 5 30567842 30568693 - TEC TEC MGP_WSBEiJ_T0001621.1 MGP_WSBEiJ_G0001544.1 mouse_genomes_project 5 66652347 66654758 + TEC TEC MGP_WSBEiJ_T0008212.1 MGP_WSBEiJ_G0006682.1 mouse_genomes_project 5 122028187 122031656 - Gm43050 lincRNA lincRNA MGP_WSBEiJ_T0008213.1 MGP_WSBEiJ_G0006682.1 mouse_genomes_project 5 122030765 122031527 - Gm43050 lincRNA lincRNA MGP_WSBEiJ_T0004793.1 MGP_WSBEiJ_G0004120.1 mouse_genomes_project 5 142944686 142945574 - 4930520M14Rik antisense antisense MGP_WSBEiJ_T0008294.1 MGP_WSBEiJ_G0006734.1 mouse_genomes_project 5 147192405 147193378 - Rbakdn lincRNA lincRNA MGP_WSBEiJ_T0008295.1 MGP_WSBEiJ_G0006734.1 mouse_genomes_project 5 147192405 147193330 - Rbakdn lincRNA lincRNA MGP_WSBEiJ_T0069060.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 16495541 18019647 + MGP_WSBEiJ_P0069060 Magi2 protein_coding protein_coding MGP_WSBEiJ_T0069061.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 16495551 17064692 + Magi2 protein_coding processed_transcript MGP_WSBEiJ_T0069062.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 16495556 18019631 + MGP_WSBEiJ_P0069062 Magi2 protein_coding protein_coding MGP_WSBEiJ_T0069063.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 16495560 18021501 + MGP_WSBEiJ_P0069063 Magi2 protein_coding protein_coding MGP_WSBEiJ_T0069064.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 16495902 16500882 + Magi2 protein_coding retained_intron MGP_WSBEiJ_T0069065.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 17203934 18021520 + MGP_WSBEiJ_P0069065 Magi2 protein_coding protein_coding MGP_WSBEiJ_T0069066.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 17204155 18019653 + MGP_WSBEiJ_P0069066 Magi2 protein_coding protein_coding MGP_WSBEiJ_T0069067.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 17204371 17491526 + MGP_WSBEiJ_P0069067 Magi2 protein_coding protein_coding MGP_WSBEiJ_T0069068.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 17500070 17763370 + Magi2 protein_coding processed_transcript MGP_WSBEiJ_T0069069.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 17527471 17964027 + Magi2 protein_coding retained_intron MGP_WSBEiJ_T0069070.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 17840036 17910084 + Magi2 protein_coding processed_transcript MGP_WSBEiJ_T0069071.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 17911768 18019081 + MGP_WSBEiJ_P0069071 Magi2 protein_coding protein_coding MGP_WSBEiJ_T0069072.1 MGP_WSBEiJ_G0028497.1 mouse_genomes_project 5 18018396 18019531 + Magi2 protein_coding processed_transcript MGP_WSBEiJ_T0098387.1 MGP_WSBEiJ_G0037050.1 mouse_genomes_project 5 127412059 127412157 - Gm24854 snRNA snRNA MGP_WSBEiJ_T0001689.1 MGP_WSBEiJ_G0001611.1 mouse_genomes_project 5 101570520 101571596 - TEC TEC MGP_WSBEiJ_T0001763.1 MGP_WSBEiJ_G0001685.1 mouse_genomes_project 5 124229818 124234065 + TEC TEC MGP_WSBEiJ_T0008005.1 MGP_WSBEiJ_G0006532.1 mouse_genomes_project 5 51420917 51434551 + Gm42746 lincRNA lincRNA MGP_WSBEiJ_T0004580.1 MGP_WSBEiJ_G0003965.1 mouse_genomes_project 5 29821535 29826422 - Gm17130 antisense antisense MGP_WSBEiJ_T0069310.1 MGP_WSBEiJ_G0028542.1 mouse_genomes_project 5 22261077 22286851 + MGP_WSBEiJ_P0069310 Nub1 protein_coding protein_coding MGP_WSBEiJ_T0069311.1 MGP_WSBEiJ_G0028542.1 mouse_genomes_project 5 22261369 22286853 + MGP_WSBEiJ_P0069311 Nub1 protein_coding protein_coding MGP_WSBEiJ_T0069312.1 MGP_WSBEiJ_G0028542.1 mouse_genomes_project 5 22261532 22286851 + Nub1 protein_coding retained_intron MGP_WSBEiJ_T0072699.1 MGP_WSBEiJ_G0029190.1 mouse_genomes_project 5 122904004 122910101 + MGP_WSBEiJ_P0072699 Rasal1 protein_coding protein_coding MGP_WSBEiJ_T0072700.1 MGP_WSBEiJ_G0029190.1 mouse_genomes_project 5 122904014 122937136 + MGP_WSBEiJ_P0072700 Rasal1 protein_coding protein_coding MGP_WSBEiJ_T0072701.1 MGP_WSBEiJ_G0029190.1 mouse_genomes_project 5 122904380 122937136 + MGP_WSBEiJ_P0072701 Rasal1 protein_coding protein_coding MGP_WSBEiJ_T0072702.1 MGP_WSBEiJ_G0029190.1 mouse_genomes_project 5 122908563 122914840 + Rasal1 protein_coding processed_transcript MGP_WSBEiJ_T0072703.1 MGP_WSBEiJ_G0029190.1 mouse_genomes_project 5 122936131 122936845 + Rasal1 protein_coding retained_intron MGP_WSBEiJ_T0073780.1 MGP_WSBEiJ_G0029372.1 mouse_genomes_project 5 139425295 139433982 + MGP_WSBEiJ_P0073780 Zp3 protein_coding protein_coding MGP_WSBEiJ_T0073781.1 MGP_WSBEiJ_G0029372.1 mouse_genomes_project 5 139425364 139432684 + MGP_WSBEiJ_P0073781 Zp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004755.1 MGP_WSBEiJ_G0004092.1 mouse_genomes_project 5 126940246 126947651 + Pitpnm2os1 antisense antisense MGP_WSBEiJ_T0072722.1 MGP_WSBEiJ_G0029197.1 mouse_genomes_project 5 123152502 123163924 + MGP_WSBEiJ_P0072722 protein_coding protein_coding MGP_WSBEiJ_T0072724.1 MGP_WSBEiJ_G0029197.1 mouse_genomes_project 5 123152520 123162193 + MGP_WSBEiJ_P0072724 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072725.1 MGP_WSBEiJ_G0029197.1 mouse_genomes_project 5 123152529 123163688 + MGP_WSBEiJ_P0072725 protein_coding protein_coding MGP_WSBEiJ_T0001457.1 MGP_WSBEiJ_G0001383.1 mouse_genomes_project 5 29945608 29948504 - TEC TEC MGP_WSBEiJ_T0001458.1 MGP_WSBEiJ_G0001383.1 mouse_genomes_project 5 29945608 29948507 - TEC TEC MGP_WSBEiJ_T0069640.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28953024 28958685 + MGP_WSBEiJ_P0069640 Snx17 protein_coding protein_coding MGP_WSBEiJ_T0069641.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28953039 28955232 + MGP_WSBEiJ_P0069641 Snx17 protein_coding protein_coding MGP_WSBEiJ_T0069642.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28953091 28958679 + MGP_WSBEiJ_P0069642 Snx17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069643.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28953103 28958684 + Snx17 protein_coding retained_intron MGP_WSBEiJ_T0069644.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28953103 28956841 + MGP_WSBEiJ_P0069644 Snx17 protein_coding protein_coding MGP_WSBEiJ_T0069645.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28953132 28958685 + MGP_WSBEiJ_P0069645 Snx17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069646.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28953651 28958928 + Snx17 protein_coding retained_intron MGP_WSBEiJ_T0069647.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28954640 28956219 + Snx17 protein_coding retained_intron MGP_WSBEiJ_T0069648.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28955170 28957035 + Snx17 protein_coding retained_intron MGP_WSBEiJ_T0069649.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28955626 28957495 + Snx17 protein_coding retained_intron MGP_WSBEiJ_T0069650.1 MGP_WSBEiJ_G0028605.1 mouse_genomes_project 5 28955834 28957929 + Snx17 protein_coding processed_transcript MGP_WSBEiJ_T0014567.1 MGP_WSBEiJ_G0012697.1 mouse_genomes_project 5 63215160 63216126 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071601.1 MGP_WSBEiJ_G0028972.1 mouse_genomes_project 5 100782222 100866022 - MGP_WSBEiJ_P0071601 Tmem150c protein_coding protein_coding MGP_WSBEiJ_T0071602.1 MGP_WSBEiJ_G0028972.1 mouse_genomes_project 5 100789227 100801849 - Tmem150c protein_coding retained_intron MGP_WSBEiJ_T0071603.1 MGP_WSBEiJ_G0028972.1 mouse_genomes_project 5 100789228 100829041 - Tmem150c protein_coding retained_intron MGP_WSBEiJ_T0071604.1 MGP_WSBEiJ_G0028972.1 mouse_genomes_project 5 100791292 100865784 - Tmem150c protein_coding retained_intron MGP_WSBEiJ_T0071605.1 MGP_WSBEiJ_G0028972.1 mouse_genomes_project 5 100791413 100864359 - MGP_WSBEiJ_P0071605 Tmem150c protein_coding protein_coding MGP_WSBEiJ_T0010525.1 MGP_WSBEiJ_G0008682.1 mouse_genomes_project 5 92870385 92870484 + Mir6415 miRNA miRNA MGP_WSBEiJ_T0100107.1 MGP_WSBEiJ_G0038711.1 mouse_genomes_project 5 72754541 72755405 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100108.1 MGP_WSBEiJ_G0038711.1 mouse_genomes_project 5 72754586 72765820 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100109.1 MGP_WSBEiJ_G0038711.1 mouse_genomes_project 5 72765643 72766097 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0001709.1 MGP_WSBEiJ_G0001631.1 mouse_genomes_project 5 108979391 108980557 + TEC TEC MGP_WSBEiJ_T0072738.1 MGP_WSBEiJ_G0029201.1 mouse_genomes_project 5 123593852 123752739 + MGP_WSBEiJ_P0072738 Gm15800 protein_coding protein_coding MGP_WSBEiJ_T0072739.1 MGP_WSBEiJ_G0029201.1 mouse_genomes_project 5 123668768 123688168 + MGP_WSBEiJ_P0072739 Gm15800 protein_coding protein_coding MGP_WSBEiJ_T0072740.1 MGP_WSBEiJ_G0029201.1 mouse_genomes_project 5 123669371 123688751 + Gm15800 protein_coding retained_intron MGP_WSBEiJ_T0072741.1 MGP_WSBEiJ_G0029201.1 mouse_genomes_project 5 123673510 123683169 + MGP_WSBEiJ_P0072741 Gm15800 protein_coding protein_coding MGP_WSBEiJ_T0072742.1 MGP_WSBEiJ_G0029201.1 mouse_genomes_project 5 123689437 123708355 + MGP_WSBEiJ_P0072742 Gm15800 protein_coding protein_coding MGP_WSBEiJ_T0072743.1 MGP_WSBEiJ_G0029201.1 mouse_genomes_project 5 123699290 123702202 + Gm15800 protein_coding processed_transcript MGP_WSBEiJ_T0072744.1 MGP_WSBEiJ_G0029201.1 mouse_genomes_project 5 123703552 123706310 + Gm15800 protein_coding processed_transcript MGP_WSBEiJ_T0004620.1 MGP_WSBEiJ_G0003997.1 mouse_genomes_project 5 64689340 64695000 - antisense antisense MGP_WSBEiJ_T0098344.1 MGP_WSBEiJ_G0037007.1 mouse_genomes_project 5 64767934 64768008 + Gm24399 snRNA snRNA MGP_WSBEiJ_T0070770.1 MGP_WSBEiJ_G0028783.1 mouse_genomes_project 5 66616670 66652154 - MGP_WSBEiJ_P0070770 Bend4 protein_coding protein_coding MGP_WSBEiJ_T0070771.1 MGP_WSBEiJ_G0028783.1 mouse_genomes_project 5 66616671 66651972 - MGP_WSBEiJ_P0070771 Bend4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070772.1 MGP_WSBEiJ_G0028783.1 mouse_genomes_project 5 66616671 66651972 - MGP_WSBEiJ_P0070772 Bend4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070773.1 MGP_WSBEiJ_G0028783.1 mouse_genomes_project 5 66616671 66651685 - MGP_WSBEiJ_P0070773 Bend4 protein_coding protein_coding MGP_WSBEiJ_T0070774.1 MGP_WSBEiJ_G0028783.1 mouse_genomes_project 5 66616671 66652665 - MGP_WSBEiJ_P0070774 Bend4 protein_coding protein_coding MGP_WSBEiJ_T0069300.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22155946 22167459 - Smarcd3 protein_coding retained_intron MGP_WSBEiJ_T0069301.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22157750 22189198 - MGP_WSBEiJ_P0069301 Smarcd3 protein_coding protein_coding MGP_WSBEiJ_T0069302.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22157750 22167495 - MGP_WSBEiJ_P0069302 Smarcd3 protein_coding protein_coding MGP_WSBEiJ_T0069304.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22159824 22161979 - Smarcd3 protein_coding retained_intron MGP_WSBEiJ_T0069305.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22160293 22167418 - Smarcd3 protein_coding retained_intron MGP_WSBEiJ_T0069306.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22160864 22164061 - Smarcd3 protein_coding retained_intron MGP_WSBEiJ_T0069307.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22160875 22162119 - Smarcd3 protein_coding retained_intron MGP_WSBEiJ_T0069308.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22160996 22167383 - Smarcd3 protein_coding retained_intron MGP_WSBEiJ_T0069309.1 MGP_WSBEiJ_G0028541.1 mouse_genomes_project 5 22187312 22187923 - Smarcd3 protein_coding processed_transcript MGP_WSBEiJ_T0100854.1 MGP_WSBEiJ_G0039312.1 mouse_genomes_project 5 83750972 83751462 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0007909.1 MGP_WSBEiJ_G0006466.1 mouse_genomes_project 5 2512476 2515628 + lincRNA lincRNA MGP_WSBEiJ_T0001861.1 MGP_WSBEiJ_G0001781.1 mouse_genomes_project 5 151823279 151824342 + TEC TEC MGP_WSBEiJ_T0074200.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142723593 142849614 - MGP_WSBEiJ_P0074200 Prkar1b protein_coding protein_coding MGP_WSBEiJ_T0074201.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142724950 142730114 - Prkar1b protein_coding processed_transcript MGP_WSBEiJ_T0074202.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142749365 142847294 - MGP_WSBEiJ_P0074202 Prkar1b protein_coding protein_coding MGP_WSBEiJ_T0074203.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142757529 142850027 - MGP_WSBEiJ_P0074203 Prkar1b protein_coding protein_coding MGP_WSBEiJ_T0074204.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142770278 142832393 - MGP_WSBEiJ_P0074204 Prkar1b protein_coding protein_coding MGP_WSBEiJ_T0074205.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142828232 142850444 - MGP_WSBEiJ_P0074205 Prkar1b protein_coding protein_coding MGP_WSBEiJ_T0074206.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142828259 142873224 - MGP_WSBEiJ_P0074206 Prkar1b protein_coding protein_coding MGP_WSBEiJ_T0074207.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142828325 142850251 - MGP_WSBEiJ_P0074207 Prkar1b protein_coding protein_coding MGP_WSBEiJ_T0074208.1 MGP_WSBEiJ_G0029451.1 mouse_genomes_project 5 142871203 142873180 - Prkar1b protein_coding processed_transcript MGP_WSBEiJ_T0072000.1 MGP_WSBEiJ_G0029057.1 mouse_genomes_project 5 111502999 111506817 + MGP_WSBEiJ_P0072000 Plcxd1 protein_coding protein_coding MGP_WSBEiJ_T0072001.1 MGP_WSBEiJ_G0029057.1 mouse_genomes_project 5 111503452 111504940 + MGP_WSBEiJ_P0072001 Plcxd1 protein_coding protein_coding MGP_WSBEiJ_T0072002.1 MGP_WSBEiJ_G0029057.1 mouse_genomes_project 5 111503589 111508950 + MGP_WSBEiJ_P0072002 Plcxd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072003.1 MGP_WSBEiJ_G0029057.1 mouse_genomes_project 5 111504264 111508955 + Plcxd1 protein_coding processed_transcript MGP_WSBEiJ_T0001780.1 MGP_WSBEiJ_G0001702.1 mouse_genomes_project 5 126709212 126710716 + TEC TEC MGP_WSBEiJ_T0070334.1 MGP_WSBEiJ_G0028715.1 mouse_genomes_project 5 42068155 42115378 + MGP_WSBEiJ_P0070334 Cd38 protein_coding protein_coding MGP_WSBEiJ_T0070335.1 MGP_WSBEiJ_G0028715.1 mouse_genomes_project 5 42068472 42069356 + Cd38 protein_coding retained_intron MGP_WSBEiJ_T0014583.1 MGP_WSBEiJ_G0012713.1 mouse_genomes_project 5 71434806 71435278 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011398.1 MGP_WSBEiJ_G0009555.1 mouse_genomes_project 5 92351639 92351915 + Gm24113 misc_RNA misc_RNA MGP_WSBEiJ_T0001443.1 MGP_WSBEiJ_G0001370.1 mouse_genomes_project 5 25709396 25713748 - TEC TEC MGP_WSBEiJ_T0071386.1 MGP_WSBEiJ_G0028927.1 mouse_genomes_project 5 92313407 92328398 - Rchy1 protein_coding processed_transcript MGP_WSBEiJ_T0071387.1 MGP_WSBEiJ_G0028927.1 mouse_genomes_project 5 92313407 92328910 - MGP_WSBEiJ_P0071387 Rchy1 protein_coding protein_coding MGP_WSBEiJ_T0071388.1 MGP_WSBEiJ_G0028927.1 mouse_genomes_project 5 92313504 92328577 - MGP_WSBEiJ_P0071388 Rchy1 protein_coding protein_coding MGP_WSBEiJ_T0071389.1 MGP_WSBEiJ_G0028927.1 mouse_genomes_project 5 92317705 92319606 - Rchy1 protein_coding retained_intron MGP_WSBEiJ_T0071390.1 MGP_WSBEiJ_G0028927.1 mouse_genomes_project 5 92327523 92328568 - Rchy1 protein_coding retained_intron MGP_WSBEiJ_T0001807.1 MGP_WSBEiJ_G0001728.1 mouse_genomes_project 5 134150210 134151845 - TEC TEC MGP_WSBEiJ_T0097505.1 MGP_WSBEiJ_G0036169.1 mouse_genomes_project 5 126169129 126174764 + Gm15751 sense_overlapping sense_overlapping MGP_WSBEiJ_T0073814.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139581730 139595019 - MGP_WSBEiJ_P0073814 Lrwd1 protein_coding protein_coding MGP_WSBEiJ_T0073815.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139582025 139594946 - Lrwd1 protein_coding retained_intron MGP_WSBEiJ_T0073816.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139582033 139584518 - Lrwd1 protein_coding retained_intron MGP_WSBEiJ_T0073817.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139582650 139589195 - MGP_WSBEiJ_P0073817 Lrwd1 protein_coding protein_coding MGP_WSBEiJ_T0073818.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139588359 139594967 - Lrwd1 protein_coding retained_intron MGP_WSBEiJ_T0073819.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139589625 139594947 - Lrwd1 protein_coding retained_intron MGP_WSBEiJ_T0073820.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139590616 139595007 - Lrwd1 protein_coding retained_intron MGP_WSBEiJ_T0073821.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139591252 139592823 - Lrwd1 protein_coding retained_intron MGP_WSBEiJ_T0073822.1 MGP_WSBEiJ_G0029378.1 mouse_genomes_project 5 139591977 139594942 - MGP_WSBEiJ_P0073822 Lrwd1 protein_coding protein_coding MGP_WSBEiJ_T0068793.1 MGP_WSBEiJ_G0028454.1 mouse_genomes_project 5 478502 488712 - MGP_WSBEiJ_P0068793 Gatad1 protein_coding protein_coding MGP_WSBEiJ_T0068797.1 MGP_WSBEiJ_G0028454.1 mouse_genomes_project 5 485130 495108 - MGP_WSBEiJ_P0068797 Gatad1 protein_coding protein_coding MGP_WSBEiJ_T0068798.1 MGP_WSBEiJ_G0028454.1 mouse_genomes_project 5 488462 504999 - MGP_WSBEiJ_P0068798 Gatad1 protein_coding protein_coding MGP_WSBEiJ_T0068799.1 MGP_WSBEiJ_G0028454.1 mouse_genomes_project 5 490248 494980 - MGP_WSBEiJ_P0068799 Gatad1 protein_coding protein_coding MGP_WSBEiJ_T0014604.1 MGP_WSBEiJ_G0012734.1 mouse_genomes_project 5 82904339 82904706 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099628.1 MGP_WSBEiJ_G0038291.1 mouse_genomes_project 5 153668424 153668522 + Gm23362 snoRNA snoRNA MGP_WSBEiJ_T0001579.1 MGP_WSBEiJ_G0001503.1 mouse_genomes_project 5 58846002 58848605 - TEC TEC MGP_WSBEiJ_T0072884.1 MGP_WSBEiJ_G0029224.1 mouse_genomes_project 5 124881507 124913475 - MGP_WSBEiJ_P0072884 Rad9b protein_coding protein_coding MGP_WSBEiJ_T0072885.1 MGP_WSBEiJ_G0029224.1 mouse_genomes_project 5 124883778 124910538 - MGP_WSBEiJ_P0072885 Rad9b protein_coding protein_coding MGP_WSBEiJ_T0072886.1 MGP_WSBEiJ_G0029224.1 mouse_genomes_project 5 124883780 124913476 - MGP_WSBEiJ_P0072886 Rad9b protein_coding protein_coding MGP_WSBEiJ_T0072887.1 MGP_WSBEiJ_G0029224.1 mouse_genomes_project 5 124910515 124912028 - MGP_WSBEiJ_P0072887 Rad9b protein_coding protein_coding MGP_WSBEiJ_T0072888.1 MGP_WSBEiJ_G0029224.1 mouse_genomes_project 5 124911738 124913463 - Rad9b protein_coding retained_intron MGP_WSBEiJ_T0071273.1 MGP_WSBEiJ_G0028889.1 mouse_genomes_project 5 88279280 88280244 - MGP_WSBEiJ_P0071273 Gm11116 protein_coding protein_coding MGP_WSBEiJ_T0008231.1 MGP_WSBEiJ_G0006692.1 mouse_genomes_project 5 126739758 126759349 - Gm43661 lincRNA lincRNA MGP_WSBEiJ_T0001622.1 MGP_WSBEiJ_G0001545.1 mouse_genomes_project 5 66840483 66841093 - TEC TEC MGP_WSBEiJ_T0014724.1 MGP_WSBEiJ_G0012854.1 mouse_genomes_project 5 141487174 141487382 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001482.1 MGP_WSBEiJ_G0001407.1 mouse_genomes_project 5 41334968 41339413 - TEC TEC MGP_WSBEiJ_T0070636.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64533548 64580602 - MGP_WSBEiJ_P0070636 Smim14 protein_coding protein_coding MGP_WSBEiJ_T0070637.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64536373 64580262 - MGP_WSBEiJ_P0070637 Smim14 protein_coding protein_coding MGP_WSBEiJ_T0070638.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64536374 64580073 - MGP_WSBEiJ_P0070638 Smim14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070639.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64536497 64547685 - Smim14 protein_coding retained_intron MGP_WSBEiJ_T0070640.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64539407 64544894 - Smim14 protein_coding retained_intron MGP_WSBEiJ_T0070641.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64546939 64625382 - MGP_WSBEiJ_P0070641 Smim14 protein_coding protein_coding MGP_WSBEiJ_T0070642.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64552467 64625327 - Smim14 protein_coding retained_intron MGP_WSBEiJ_T0070643.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64554415 64580083 - Smim14 protein_coding retained_intron MGP_WSBEiJ_T0070644.1 MGP_WSBEiJ_G0028768.1 mouse_genomes_project 5 64577150 64580602 - Smim14 protein_coding retained_intron MGP_WSBEiJ_T0008034.1 MGP_WSBEiJ_G0006554.1 mouse_genomes_project 5 73309246 73316762 + Gm43801 lincRNA lincRNA MGP_WSBEiJ_T0100878.1 MGP_WSBEiJ_G0039336.1 mouse_genomes_project 5 153424420 153424643 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0070304.1 MGP_WSBEiJ_G0028709.1 mouse_genomes_project 5 40272651 40415387 + MGP_WSBEiJ_P0070304 Gm16223 protein_coding protein_coding MGP_WSBEiJ_T0008297.1 MGP_WSBEiJ_G0006736.1 mouse_genomes_project 5 147310140 147312577 + BC030343 lincRNA lincRNA MGP_WSBEiJ_T0014515.1 MGP_WSBEiJ_G0012645.1 mouse_genomes_project 5 36670211 36670610 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001445.1 MGP_WSBEiJ_G0001372.1 mouse_genomes_project 5 26275966 26277652 + TEC TEC MGP_WSBEiJ_T0069490.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406656 28414548 + MGP_WSBEiJ_P0069490 Cenpa protein_coding protein_coding MGP_WSBEiJ_T0069491.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406776 28414096 + MGP_WSBEiJ_P0069491 Cenpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069492.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406791 28414033 + MGP_WSBEiJ_P0069492 Cenpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069493.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406814 28414127 + Cenpa protein_coding retained_intron MGP_WSBEiJ_T0069494.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406822 28409480 + MGP_WSBEiJ_P0069494 Cenpa protein_coding protein_coding MGP_WSBEiJ_T0069495.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406836 28413782 + MGP_WSBEiJ_P0069495 Cenpa protein_coding protein_coding MGP_WSBEiJ_T0069496.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406839 28410477 + Cenpa protein_coding retained_intron MGP_WSBEiJ_T0069497.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406853 28414127 + MGP_WSBEiJ_P0069497 Cenpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069498.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28406877 28414104 + MGP_WSBEiJ_P0069498 Cenpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069499.1 MGP_WSBEiJ_G0028583.1 mouse_genomes_project 5 28411670 28413920 + Cenpa protein_coding retained_intron MGP_WSBEiJ_T0014622.1 MGP_WSBEiJ_G0012752.1 mouse_genomes_project 5 89017091 89018721 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074047.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141333137 141358595 + MGP_WSBEiJ_P0074047 Tsc22d4 protein_coding protein_coding MGP_WSBEiJ_T0074048.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141333366 141343122 + Tsc22d4 protein_coding retained_intron MGP_WSBEiJ_T0074049.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141333403 141351634 + MGP_WSBEiJ_P0074049 Tsc22d4 protein_coding protein_coding MGP_WSBEiJ_T0074050.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141341575 141349140 + Tsc22d4 protein_coding retained_intron MGP_WSBEiJ_T0074051.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141348386 141349790 + MGP_WSBEiJ_P0074051 Tsc22d4 protein_coding protein_coding MGP_WSBEiJ_T0074052.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141348426 141349674 + MGP_WSBEiJ_P0074052 Tsc22d4 protein_coding protein_coding MGP_WSBEiJ_T0074053.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141351924 141358537 + MGP_WSBEiJ_P0074053 Tsc22d4 protein_coding protein_coding MGP_WSBEiJ_T0074054.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141351935 141358537 + MGP_WSBEiJ_P0074054 Tsc22d4 protein_coding protein_coding MGP_WSBEiJ_T0074055.1 MGP_WSBEiJ_G0029419.1 mouse_genomes_project 5 141357834 141358427 + Tsc22d4 protein_coding processed_transcript MGP_WSBEiJ_T0004622.1 MGP_WSBEiJ_G0003999.1 mouse_genomes_project 5 65334299 65359590 - 1700126H18Rik antisense antisense MGP_WSBEiJ_T0001740.1 MGP_WSBEiJ_G0001662.1 mouse_genomes_project 5 118474973 118476309 - TEC TEC MGP_WSBEiJ_T0014568.1 MGP_WSBEiJ_G0012698.1 mouse_genomes_project 5 63215160 63216126 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072333.1 MGP_WSBEiJ_G0029118.1 mouse_genomes_project 5 116178578 116200011 - MGP_WSBEiJ_P0072333 Mmab protein_coding protein_coding MGP_WSBEiJ_T0072334.1 MGP_WSBEiJ_G0029118.1 mouse_genomes_project 5 116180744 116199972 - MGP_WSBEiJ_P0072334 Mmab protein_coding protein_coding MGP_WSBEiJ_T0072335.1 MGP_WSBEiJ_G0029118.1 mouse_genomes_project 5 116182172 116199943 - MGP_WSBEiJ_P0072335 Mmab protein_coding protein_coding MGP_WSBEiJ_T0008275.1 MGP_WSBEiJ_G0006718.1 mouse_genomes_project 5 137342525 137343322 - Gm15627 lincRNA lincRNA MGP_WSBEiJ_T0007949.1 MGP_WSBEiJ_G0006492.1 mouse_genomes_project 5 27069199 27086863 + 4632411P08Rik lincRNA lincRNA MGP_WSBEiJ_T0072911.1 MGP_WSBEiJ_G0029229.1 mouse_genomes_project 5 124980539 125005531 + MGP_WSBEiJ_P0072911 Anapc7 protein_coding protein_coding MGP_WSBEiJ_T0072912.1 MGP_WSBEiJ_G0029229.1 mouse_genomes_project 5 124981291 125005531 + MGP_WSBEiJ_P0072912 Anapc7 protein_coding protein_coding MGP_WSBEiJ_T0072913.1 MGP_WSBEiJ_G0029229.1 mouse_genomes_project 5 124981328 125004053 + MGP_WSBEiJ_P0072913 Anapc7 protein_coding protein_coding MGP_WSBEiJ_T0072914.1 MGP_WSBEiJ_G0029229.1 mouse_genomes_project 5 124999999 125001111 + Anapc7 protein_coding retained_intron MGP_WSBEiJ_T0072915.1 MGP_WSBEiJ_G0029229.1 mouse_genomes_project 5 125000764 125002422 + Anapc7 protein_coding retained_intron MGP_WSBEiJ_T0072916.1 MGP_WSBEiJ_G0029229.1 mouse_genomes_project 5 125001993 125002401 + MGP_WSBEiJ_P0072916 Anapc7 protein_coding protein_coding MGP_WSBEiJ_T0071978.1 MGP_WSBEiJ_G0029048.1 mouse_genomes_project 5 109845776 109851460 - MGP_WSBEiJ_P0071978 Slc26a1 protein_coding protein_coding MGP_WSBEiJ_T0071979.1 MGP_WSBEiJ_G0029048.1 mouse_genomes_project 5 109846428 109850644 - MGP_WSBEiJ_P0071979 Slc26a1 protein_coding protein_coding MGP_WSBEiJ_T0071980.1 MGP_WSBEiJ_G0029048.1 mouse_genomes_project 5 109846444 109850644 - MGP_WSBEiJ_P0071980 Slc26a1 protein_coding protein_coding MGP_WSBEiJ_T0071981.1 MGP_WSBEiJ_G0029048.1 mouse_genomes_project 5 109847977 109850676 - MGP_WSBEiJ_P0071981 Slc26a1 protein_coding protein_coding MGP_WSBEiJ_T0008013.1 MGP_WSBEiJ_G0006539.1 mouse_genomes_project 5 63066379 63071611 + 5830416I19Rik lincRNA lincRNA MGP_WSBEiJ_T0070396.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 43941267 44100409 - MGP_WSBEiJ_P0070396 Lcorl protein_coding protein_coding MGP_WSBEiJ_T0070397.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 43941270 44100261 - MGP_WSBEiJ_P0070397 Lcorl protein_coding protein_coding MGP_WSBEiJ_T0070399.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 43944546 44099357 - MGP_WSBEiJ_P0070399 Lcorl protein_coding protein_coding MGP_WSBEiJ_T0070400.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 43945548 43967349 - Lcorl protein_coding processed_transcript MGP_WSBEiJ_T0070401.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 43963711 43971624 - Lcorl protein_coding retained_intron MGP_WSBEiJ_T0070402.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 43978084 44100291 - MGP_WSBEiJ_P0070402 Lcorl protein_coding protein_coding MGP_WSBEiJ_T0070403.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 43991872 44100261 - MGP_WSBEiJ_P0070403 Lcorl protein_coding protein_coding MGP_WSBEiJ_T0070404.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 43991893 44100275 - MGP_WSBEiJ_P0070404 Lcorl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070405.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 44021125 44100295 - Lcorl protein_coding processed_transcript MGP_WSBEiJ_T0070406.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 44024190 44100409 - Lcorl protein_coding retained_intron MGP_WSBEiJ_T0070407.1 MGP_WSBEiJ_G0028726.1 mouse_genomes_project 5 44024360 44100282 - MGP_WSBEiJ_P0070407 Lcorl protein_coding protein_coding MGP_WSBEiJ_T0071410.1 MGP_WSBEiJ_G0028931.1 mouse_genomes_project 5 92518816 92587875 + MGP_WSBEiJ_P0071410 protein_coding protein_coding MGP_WSBEiJ_T0071411.1 MGP_WSBEiJ_G0028931.1 mouse_genomes_project 5 92518824 92587878 + MGP_WSBEiJ_P0071411 protein_coding protein_coding MGP_WSBEiJ_T0071412.1 MGP_WSBEiJ_G0028931.1 mouse_genomes_project 5 92518825 92567706 + protein_coding retained_intron MGP_WSBEiJ_T0071413.1 MGP_WSBEiJ_G0028931.1 mouse_genomes_project 5 92518844 92587876 + MGP_WSBEiJ_P0071413 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071414.1 MGP_WSBEiJ_G0028931.1 mouse_genomes_project 5 92565039 92587855 + protein_coding processed_transcript MGP_WSBEiJ_T0008133.1 MGP_WSBEiJ_G0006633.1 mouse_genomes_project 5 109522686 109523161 - Gm42517 lincRNA lincRNA MGP_WSBEiJ_T0014685.1 MGP_WSBEiJ_G0012815.1 mouse_genomes_project 5 115968756 115969557 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069542.1 MGP_WSBEiJ_G0028590.1 mouse_genomes_project 5 28660154 28669974 + MGP_WSBEiJ_P0069542 Khk protein_coding protein_coding MGP_WSBEiJ_T0069543.1 MGP_WSBEiJ_G0028590.1 mouse_genomes_project 5 28660315 28669772 + MGP_WSBEiJ_P0069543 Khk protein_coding protein_coding MGP_WSBEiJ_T0069544.1 MGP_WSBEiJ_G0028590.1 mouse_genomes_project 5 28660558 28669915 + MGP_WSBEiJ_P0069544 Khk protein_coding protein_coding MGP_WSBEiJ_T0069545.1 MGP_WSBEiJ_G0028590.1 mouse_genomes_project 5 28660583 28669519 + MGP_WSBEiJ_P0069545 Khk protein_coding protein_coding MGP_WSBEiJ_T0069546.1 MGP_WSBEiJ_G0028590.1 mouse_genomes_project 5 28669339 28669971 + Khk protein_coding retained_intron MGP_WSBEiJ_T0004613.1 MGP_WSBEiJ_G0003990.1 mouse_genomes_project 5 46315028 46317672 - 4930518C09Rik antisense antisense MGP_WSBEiJ_T0014455.1 MGP_WSBEiJ_G0012585.1 mouse_genomes_project 5 19667798 19668170 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001779.1 MGP_WSBEiJ_G0001701.1 mouse_genomes_project 5 126370144 126370676 + TEC TEC MGP_WSBEiJ_T0070775.1 MGP_WSBEiJ_G0028784.1 mouse_genomes_project 5 66841148 66847308 + MGP_WSBEiJ_P0070775 Shisa3 protein_coding protein_coding MGP_WSBEiJ_T0070776.1 MGP_WSBEiJ_G0028784.1 mouse_genomes_project 5 66841235 66858008 + MGP_WSBEiJ_P0070776 Shisa3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099587.1 MGP_WSBEiJ_G0038250.1 mouse_genomes_project 5 51395205 51395317 - Gm23532 snoRNA snoRNA MGP_WSBEiJ_T0074154.1 MGP_WSBEiJ_G0029443.1 mouse_genomes_project 5 141868070 141874441 - MGP_WSBEiJ_P0074154 Gpc2 protein_coding protein_coding MGP_WSBEiJ_T0074155.1 MGP_WSBEiJ_G0029443.1 mouse_genomes_project 5 141868072 141874421 - Gpc2 protein_coding retained_intron MGP_WSBEiJ_T0074156.1 MGP_WSBEiJ_G0029443.1 mouse_genomes_project 5 141868072 141874398 - Gpc2 protein_coding retained_intron MGP_WSBEiJ_T0074157.1 MGP_WSBEiJ_G0029443.1 mouse_genomes_project 5 141868072 141874418 - MGP_WSBEiJ_P0074157 Gpc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074158.1 MGP_WSBEiJ_G0029443.1 mouse_genomes_project 5 141868075 141874401 - MGP_WSBEiJ_P0074158 Gpc2 protein_coding protein_coding MGP_WSBEiJ_T0074159.1 MGP_WSBEiJ_G0029443.1 mouse_genomes_project 5 141869950 141872673 - Gpc2 protein_coding retained_intron MGP_WSBEiJ_T0074160.1 MGP_WSBEiJ_G0029443.1 mouse_genomes_project 5 141871063 141874399 - Gpc2 protein_coding processed_transcript MGP_WSBEiJ_T0001787.1 MGP_WSBEiJ_G0001708.1 mouse_genomes_project 5 128244183 128247037 + TEC TEC MGP_WSBEiJ_T0014770.1 MGP_WSBEiJ_G0012900.1 mouse_genomes_project 5 155070820 155071384 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008277.1 MGP_WSBEiJ_G0006720.1 mouse_genomes_project 5 139052096 139079056 - Gm43091 lincRNA lincRNA MGP_WSBEiJ_T0014654.1 MGP_WSBEiJ_G0012784.1 mouse_genomes_project 5 107008921 107009528 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008346.1 MGP_WSBEiJ_G0006773.1 mouse_genomes_project 5 155228895 155235967 - Gm43597 lincRNA lincRNA MGP_WSBEiJ_T0008347.1 MGP_WSBEiJ_G0006773.1 mouse_genomes_project 5 155228900 155235930 - Gm43597 lincRNA lincRNA MGP_WSBEiJ_T0008348.1 MGP_WSBEiJ_G0006773.1 mouse_genomes_project 5 155230862 155235847 - Gm43597 lincRNA lincRNA MGP_WSBEiJ_T0007983.1 MGP_WSBEiJ_G0006513.1 mouse_genomes_project 5 37601508 37751888 - 4930513D17Rik lincRNA lincRNA MGP_WSBEiJ_T0007984.1 MGP_WSBEiJ_G0006513.1 mouse_genomes_project 5 37602323 37751931 - 4930513D17Rik lincRNA lincRNA MGP_WSBEiJ_T0007985.1 MGP_WSBEiJ_G0006513.1 mouse_genomes_project 5 37615473 37751886 - 4930513D17Rik lincRNA lincRNA MGP_WSBEiJ_T0001656.1 MGP_WSBEiJ_G0001578.1 mouse_genomes_project 5 73996939 73998270 + TEC TEC MGP_WSBEiJ_T0014565.1 MGP_WSBEiJ_G0012695.1 mouse_genomes_project 5 63020068 63020562 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072336.1 MGP_WSBEiJ_G0029119.1 mouse_genomes_project 5 116200219 116209275 + MGP_WSBEiJ_P0072336 Mvk protein_coding protein_coding MGP_WSBEiJ_T0072337.1 MGP_WSBEiJ_G0029119.1 mouse_genomes_project 5 116200236 116216564 + MGP_WSBEiJ_P0072337 Mvk protein_coding protein_coding MGP_WSBEiJ_T0072338.1 MGP_WSBEiJ_G0029119.1 mouse_genomes_project 5 116200244 116216671 + Mvk protein_coding retained_intron MGP_WSBEiJ_T0072339.1 MGP_WSBEiJ_G0029119.1 mouse_genomes_project 5 116200253 116211612 + MGP_WSBEiJ_P0072339 Mvk protein_coding protein_coding MGP_WSBEiJ_T0072340.1 MGP_WSBEiJ_G0029119.1 mouse_genomes_project 5 116200253 116209275 + MGP_WSBEiJ_P0072340 Mvk protein_coding protein_coding MGP_WSBEiJ_T0072341.1 MGP_WSBEiJ_G0029119.1 mouse_genomes_project 5 116200256 116216678 + MGP_WSBEiJ_P0072341 Mvk protein_coding protein_coding MGP_WSBEiJ_T0072342.1 MGP_WSBEiJ_G0029119.1 mouse_genomes_project 5 116208545 116216659 + MGP_WSBEiJ_P0072342 Mvk protein_coding protein_coding MGP_WSBEiJ_T0098369.1 MGP_WSBEiJ_G0037032.1 mouse_genomes_project 5 101259937 101260097 - Gm23173 snRNA snRNA MGP_WSBEiJ_T0014626.1 MGP_WSBEiJ_G0012756.1 mouse_genomes_project 5 91076572 91076886 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100098.1 MGP_WSBEiJ_G0038703.1 mouse_genomes_project 5 26907163 26908005 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0071848.1 MGP_WSBEiJ_G0029026.1 mouse_genomes_project 5 108637948 108651979 + MGP_WSBEiJ_P0071848 1700028K03Rik protein_coding protein_coding MGP_WSBEiJ_T0071849.1 MGP_WSBEiJ_G0029026.1 mouse_genomes_project 5 108637959 108656902 + 1700028K03Rik protein_coding processed_transcript MGP_WSBEiJ_T0071850.1 MGP_WSBEiJ_G0029026.1 mouse_genomes_project 5 108637976 108652808 + MGP_WSBEiJ_P0071850 1700028K03Rik protein_coding protein_coding MGP_WSBEiJ_T0071851.1 MGP_WSBEiJ_G0029026.1 mouse_genomes_project 5 108637996 108652616 + 1700028K03Rik protein_coding retained_intron MGP_WSBEiJ_T0097220.1 MGP_WSBEiJ_G0035901.1 mouse_genomes_project 5 138417140 138417269 - Gm25492 scaRNA scaRNA MGP_WSBEiJ_T0004549.1 MGP_WSBEiJ_G0003939.1 mouse_genomes_project 5 338042 339490 - Gm42435 antisense antisense MGP_WSBEiJ_T0001752.1 MGP_WSBEiJ_G0001674.1 mouse_genomes_project 5 121132233 121134668 - TEC TEC MGP_WSBEiJ_T0071644.1 MGP_WSBEiJ_G0028978.1 mouse_genomes_project 5 101435427 101479301 - MGP_WSBEiJ_P0071644 Hpse protein_coding protein_coding MGP_WSBEiJ_T0071645.1 MGP_WSBEiJ_G0028978.1 mouse_genomes_project 5 101440490 101479290 - MGP_WSBEiJ_P0071645 Hpse protein_coding protein_coding MGP_WSBEiJ_T0010496.1 MGP_WSBEiJ_G0008653.1 mouse_genomes_project 5 20717300 20717346 - Gm28022 miRNA miRNA MGP_WSBEiJ_T0004783.1 MGP_WSBEiJ_G0004115.1 mouse_genomes_project 5 141094828 141103120 + Gm17112 antisense antisense MGP_WSBEiJ_T0073957.1 MGP_WSBEiJ_G0029403.1 mouse_genomes_project 5 140927360 141031485 - MGP_WSBEiJ_P0073957 Zan protein_coding protein_coding MGP_WSBEiJ_T0073958.1 MGP_WSBEiJ_G0029403.1 mouse_genomes_project 5 140927360 141031016 - MGP_WSBEiJ_P0073958 Zan protein_coding protein_coding MGP_WSBEiJ_T0073959.1 MGP_WSBEiJ_G0029403.1 mouse_genomes_project 5 140949554 140953640 - Zan protein_coding retained_intron MGP_WSBEiJ_T0073960.1 MGP_WSBEiJ_G0029403.1 mouse_genomes_project 5 140961461 140963380 - MGP_WSBEiJ_P0073960 Zan protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073961.1 MGP_WSBEiJ_G0029403.1 mouse_genomes_project 5 140988779 141004907 - Zan protein_coding retained_intron MGP_WSBEiJ_T0073125.1 MGP_WSBEiJ_G0029259.1 mouse_genomes_project 5 126608182 126631873 + MGP_WSBEiJ_P0073125 Denr protein_coding protein_coding MGP_WSBEiJ_T0073126.1 MGP_WSBEiJ_G0029259.1 mouse_genomes_project 5 126608276 126609516 + Denr protein_coding processed_transcript MGP_WSBEiJ_T0073127.1 MGP_WSBEiJ_G0029259.1 mouse_genomes_project 5 126608282 126612244 + Denr protein_coding retained_intron MGP_WSBEiJ_T0073128.1 MGP_WSBEiJ_G0029259.1 mouse_genomes_project 5 126608289 126609496 + Denr protein_coding retained_intron MGP_WSBEiJ_T0073129.1 MGP_WSBEiJ_G0029259.1 mouse_genomes_project 5 126608496 126630171 + MGP_WSBEiJ_P0073129 Denr protein_coding protein_coding MGP_WSBEiJ_T0010499.1 MGP_WSBEiJ_G0008656.1 mouse_genomes_project 5 27941711 27941789 + Mir1960 miRNA miRNA MGP_WSBEiJ_T0001742.1 MGP_WSBEiJ_G0001664.1 mouse_genomes_project 5 119137853 119140548 + TEC TEC MGP_WSBEiJ_T0008029.1 MGP_WSBEiJ_G0006551.1 mouse_genomes_project 5 71970391 71972599 + 4933408A14Rik lincRNA lincRNA MGP_WSBEiJ_T0008197.1 MGP_WSBEiJ_G0006669.1 mouse_genomes_project 5 119320791 119323716 - BC051077 lincRNA lincRNA MGP_WSBEiJ_T0004560.1 MGP_WSBEiJ_G0003949.1 mouse_genomes_project 5 16469272 16495061 - 4921504A21Rik antisense antisense MGP_WSBEiJ_T0004561.1 MGP_WSBEiJ_G0003949.1 mouse_genomes_project 5 16470197 16494674 - 4921504A21Rik antisense antisense MGP_WSBEiJ_T0014501.1 MGP_WSBEiJ_G0012631.1 mouse_genomes_project 5 30939041 30939256 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098392.1 MGP_WSBEiJ_G0037055.1 mouse_genomes_project 5 141972918 141973025 + Gm25525 snRNA snRNA MGP_WSBEiJ_T0014488.1 MGP_WSBEiJ_G0012618.1 mouse_genomes_project 5 27405478 27405770 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014710.1 MGP_WSBEiJ_G0012840.1 mouse_genomes_project 5 133229932 133230334 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073944.1 MGP_WSBEiJ_G0029400.1 mouse_genomes_project 5 140849804 140854553 - MGP_WSBEiJ_P0073944 Trip6 protein_coding protein_coding MGP_WSBEiJ_T0073945.1 MGP_WSBEiJ_G0029400.1 mouse_genomes_project 5 140853103 140854339 - MGP_WSBEiJ_P0073945 Trip6 protein_coding protein_coding MGP_WSBEiJ_T0073946.1 MGP_WSBEiJ_G0029400.1 mouse_genomes_project 5 140853130 140854313 - Trip6 protein_coding retained_intron MGP_WSBEiJ_T0073947.1 MGP_WSBEiJ_G0029400.1 mouse_genomes_project 5 140853509 140854356 - Trip6 protein_coding processed_transcript MGP_WSBEiJ_T0097060.1 MGP_WSBEiJ_G0035741.1 mouse_genomes_project 5 19812871 19812984 - n-R5s170 rRNA rRNA MGP_WSBEiJ_T0069336.1 MGP_WSBEiJ_G0028549.1 mouse_genomes_project 5 22821500 22821806 - MGP_WSBEiJ_P0069336 E130116L18Rik protein_coding protein_coding MGP_WSBEiJ_T0074692.1 MGP_WSBEiJ_G0029561.1 mouse_genomes_project 5 151647834 151653704 + MGP_WSBEiJ_P0074692 Pdx1 protein_coding protein_coding MGP_WSBEiJ_T0099585.1 MGP_WSBEiJ_G0038248.1 mouse_genomes_project 5 34699435 34699559 + snoRNA snoRNA MGP_WSBEiJ_T0074096.1 MGP_WSBEiJ_G0029431.1 mouse_genomes_project 5 141724285 141743320 - MGP_WSBEiJ_P0074096 Zfp113 protein_coding protein_coding MGP_WSBEiJ_T0074097.1 MGP_WSBEiJ_G0029431.1 mouse_genomes_project 5 141731374 141740475 - MGP_WSBEiJ_P0074097 Zfp113 protein_coding protein_coding MGP_WSBEiJ_T0074098.1 MGP_WSBEiJ_G0029431.1 mouse_genomes_project 5 141738094 141743276 - Zfp113 protein_coding retained_intron MGP_WSBEiJ_T0074099.1 MGP_WSBEiJ_G0029431.1 mouse_genomes_project 5 141738502 141743280 - MGP_WSBEiJ_P0074099 Zfp113 protein_coding protein_coding MGP_WSBEiJ_T0001803.1 MGP_WSBEiJ_G0001724.1 mouse_genomes_project 5 133695135 133695563 - TEC TEC MGP_WSBEiJ_T0014732.1 MGP_WSBEiJ_G0012862.1 mouse_genomes_project 5 143481131 143481507 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014661.1 MGP_WSBEiJ_G0012791.1 mouse_genomes_project 5 108574986 108575731 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070074.1 MGP_WSBEiJ_G0028667.1 mouse_genomes_project 5 33383778 33395338 + MGP_WSBEiJ_P0070074 Hmx1 protein_coding protein_coding MGP_WSBEiJ_T0070075.1 MGP_WSBEiJ_G0028667.1 mouse_genomes_project 5 33383787 33387560 + MGP_WSBEiJ_P0070075 Hmx1 protein_coding protein_coding MGP_WSBEiJ_T0071573.1 MGP_WSBEiJ_G0028967.1 mouse_genomes_project 5 99953850 100410932 - MGP_WSBEiJ_P0071573 protein_coding protein_coding MGP_WSBEiJ_T0071574.1 MGP_WSBEiJ_G0028967.1 mouse_genomes_project 5 100030583 100410949 - MGP_WSBEiJ_P0071574 protein_coding protein_coding MGP_WSBEiJ_T0071575.1 MGP_WSBEiJ_G0028967.1 mouse_genomes_project 5 100225930 100410952 - protein_coding retained_intron MGP_WSBEiJ_T0071576.1 MGP_WSBEiJ_G0028967.1 mouse_genomes_project 5 100359240 100410708 - protein_coding processed_transcript MGP_WSBEiJ_T0071577.1 MGP_WSBEiJ_G0028967.1 mouse_genomes_project 5 100405354 100410943 - MGP_WSBEiJ_P0071577 protein_coding protein_coding MGP_WSBEiJ_T0004559.1 MGP_WSBEiJ_G0003948.1 mouse_genomes_project 5 13132192 13136075 - Gm43000 antisense antisense MGP_WSBEiJ_T0072866.1 MGP_WSBEiJ_G0029220.1 mouse_genomes_project 5 124707730 124725266 + MGP_WSBEiJ_P0072866 Ppp1cc protein_coding protein_coding MGP_WSBEiJ_T0072867.1 MGP_WSBEiJ_G0029220.1 mouse_genomes_project 5 124707730 124725266 + MGP_WSBEiJ_P0072867 Ppp1cc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072868.1 MGP_WSBEiJ_G0029220.1 mouse_genomes_project 5 124707967 124725089 + MGP_WSBEiJ_P0072868 Ppp1cc protein_coding protein_coding MGP_WSBEiJ_T0072869.1 MGP_WSBEiJ_G0029220.1 mouse_genomes_project 5 124708331 124719119 + Ppp1cc protein_coding retained_intron MGP_WSBEiJ_T0072870.1 MGP_WSBEiJ_G0029220.1 mouse_genomes_project 5 124718319 124725258 + MGP_WSBEiJ_P0072870 Ppp1cc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072871.1 MGP_WSBEiJ_G0029220.1 mouse_genomes_project 5 124720992 124722212 + Ppp1cc protein_coding retained_intron MGP_WSBEiJ_T0072872.1 MGP_WSBEiJ_G0029220.1 mouse_genomes_project 5 124721275 124725258 + MGP_WSBEiJ_P0072872 Ppp1cc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001708.1 MGP_WSBEiJ_G0001630.1 mouse_genomes_project 5 108911105 108912451 - TEC TEC MGP_WSBEiJ_T0008001.1 MGP_WSBEiJ_G0006528.1 mouse_genomes_project 5 50496456 50497668 + Gm43177 lincRNA lincRNA MGP_WSBEiJ_T0001802.1 MGP_WSBEiJ_G0001723.1 mouse_genomes_project 5 133269485 133270825 + TEC TEC MGP_WSBEiJ_T0073882.1 MGP_WSBEiJ_G0029388.1 mouse_genomes_project 5 140500822 140509979 + MGP_WSBEiJ_P0073882 Cldn15 protein_coding protein_coding MGP_WSBEiJ_T0073883.1 MGP_WSBEiJ_G0029388.1 mouse_genomes_project 5 140502070 140509965 + MGP_WSBEiJ_P0073883 Cldn15 protein_coding protein_coding MGP_WSBEiJ_T0073884.1 MGP_WSBEiJ_G0029388.1 mouse_genomes_project 5 140508072 140509134 + Cldn15 protein_coding processed_transcript MGP_WSBEiJ_T0071711.1 MGP_WSBEiJ_G0028989.1 mouse_genomes_project 5 104465860 104489356 - MGP_WSBEiJ_P0071711 Slc10a6 protein_coding protein_coding MGP_WSBEiJ_T0074624.1 MGP_WSBEiJ_G0029541.1 mouse_genomes_project 5 149384847 149401585 + MGP_WSBEiJ_P0074624 Zfp655 protein_coding protein_coding MGP_WSBEiJ_T0074625.1 MGP_WSBEiJ_G0029541.1 mouse_genomes_project 5 149384879 149401584 + MGP_WSBEiJ_P0074625 Zfp655 protein_coding protein_coding MGP_WSBEiJ_T0074626.1 MGP_WSBEiJ_G0029541.1 mouse_genomes_project 5 149384880 149390548 + MGP_WSBEiJ_P0074626 Zfp655 protein_coding protein_coding MGP_WSBEiJ_T0074627.1 MGP_WSBEiJ_G0029541.1 mouse_genomes_project 5 149384881 149390418 + MGP_WSBEiJ_P0074627 Zfp655 protein_coding protein_coding MGP_WSBEiJ_T0074628.1 MGP_WSBEiJ_G0029541.1 mouse_genomes_project 5 149386560 149390382 + MGP_WSBEiJ_P0074628 Zfp655 protein_coding protein_coding MGP_WSBEiJ_T0008219.1 MGP_WSBEiJ_G0006687.1 mouse_genomes_project 5 125653373 125844619 - lincRNA lincRNA MGP_WSBEiJ_T0007954.1 MGP_WSBEiJ_G0006496.1 mouse_genomes_project 5 29362899 29364702 - AI839979 lincRNA lincRNA MGP_WSBEiJ_T0007955.1 MGP_WSBEiJ_G0006496.1 mouse_genomes_project 5 29363409 29364696 - AI839979 lincRNA lincRNA MGP_WSBEiJ_T0014719.1 MGP_WSBEiJ_G0012849.1 mouse_genomes_project 5 140415411 140415803 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100868.1 MGP_WSBEiJ_G0039326.1 mouse_genomes_project 5 140532111 140534020 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004685.1 MGP_WSBEiJ_G0004042.1 mouse_genomes_project 5 108485653 108496875 - Gm42902 antisense antisense MGP_WSBEiJ_T0014759.1 MGP_WSBEiJ_G0012889.1 mouse_genomes_project 5 151446936 151447428 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001409.1 MGP_WSBEiJ_G0001337.1 mouse_genomes_project 5 9520620 9524240 + TEC TEC MGP_WSBEiJ_T0069628.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28947419 28953228 - MGP_WSBEiJ_P0069628 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0069629.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28947420 28952937 - MGP_WSBEiJ_P0069629 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0069630.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28947428 28952806 - MGP_WSBEiJ_P0069630 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0069631.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28947429 28952812 - MGP_WSBEiJ_P0069631 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0069632.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28947430 28951440 - MGP_WSBEiJ_P0069632 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0069633.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28949194 28950654 - Eif2b4 protein_coding retained_intron MGP_WSBEiJ_T0069634.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28949361 28949709 - MGP_WSBEiJ_P0069634 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0069635.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28949381 28950944 - MGP_WSBEiJ_P0069635 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0069636.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28950190 28950992 - MGP_WSBEiJ_P0069636 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0069637.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28950992 28952937 - Eif2b4 protein_coding processed_transcript MGP_WSBEiJ_T0069638.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28951122 28952797 - Eif2b4 protein_coding retained_intron MGP_WSBEiJ_T0069639.1 MGP_WSBEiJ_G0028604.1 mouse_genomes_project 5 28951510 28953216 - MGP_WSBEiJ_P0069639 Eif2b4 protein_coding protein_coding MGP_WSBEiJ_T0071475.1 MGP_WSBEiJ_G0028942.1 mouse_genomes_project 5 93008200 93009980 + MGP_WSBEiJ_P0071475 Stbd1 protein_coding protein_coding MGP_WSBEiJ_T0071476.1 MGP_WSBEiJ_G0028942.1 mouse_genomes_project 5 93008210 93011740 + MGP_WSBEiJ_P0071476 Stbd1 protein_coding protein_coding MGP_WSBEiJ_T0071477.1 MGP_WSBEiJ_G0028942.1 mouse_genomes_project 5 93008227 93011455 + MGP_WSBEiJ_P0071477 Stbd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004765.1 MGP_WSBEiJ_G0004099.1 mouse_genomes_project 5 131678101 131686398 + Gm42875 antisense antisense MGP_WSBEiJ_T0014472.1 MGP_WSBEiJ_G0012602.1 mouse_genomes_project 5 22984902 22985179 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008195.1 MGP_WSBEiJ_G0006668.1 mouse_genomes_project 5 118803066 118806420 + Gm29926 lincRNA lincRNA MGP_WSBEiJ_T0014487.1 MGP_WSBEiJ_G0012617.1 mouse_genomes_project 5 27243557 27243914 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069205.1 MGP_WSBEiJ_G0028523.1 mouse_genomes_project 5 21430341 21440809 - Fam126a protein_coding processed_transcript MGP_WSBEiJ_T0069206.1 MGP_WSBEiJ_G0028523.1 mouse_genomes_project 5 21430342 21556592 - MGP_WSBEiJ_P0069206 Fam126a protein_coding protein_coding MGP_WSBEiJ_T0069207.1 MGP_WSBEiJ_G0028523.1 mouse_genomes_project 5 21479852 21556805 - MGP_WSBEiJ_P0069207 Fam126a protein_coding protein_coding MGP_WSBEiJ_T0069208.1 MGP_WSBEiJ_G0028523.1 mouse_genomes_project 5 21503691 21506845 - Fam126a protein_coding retained_intron MGP_WSBEiJ_T0069209.1 MGP_WSBEiJ_G0028523.1 mouse_genomes_project 5 21510657 21556585 - Fam126a protein_coding processed_transcript MGP_WSBEiJ_T0073534.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496853 137577925 - MGP_WSBEiJ_P0073534 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073535.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496856 137577911 - MGP_WSBEiJ_P0073535 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073536.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496856 137577911 - MGP_WSBEiJ_P0073536 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073537.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496858 137576210 - MGP_WSBEiJ_P0073537 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073538.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496861 137576210 - MGP_WSBEiJ_P0073538 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073539.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496862 137541029 - Gtf2i protein_coding processed_transcript MGP_WSBEiJ_T0073540.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496862 137556522 - MGP_WSBEiJ_P0073540 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073541.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496862 137556522 - MGP_WSBEiJ_P0073541 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073542.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496862 137556522 - MGP_WSBEiJ_P0073542 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073543.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137496862 137556522 - MGP_WSBEiJ_P0073543 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073544.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137497516 137502582 - MGP_WSBEiJ_P0073544 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073545.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137497862 137501431 - Gtf2i protein_coding retained_intron MGP_WSBEiJ_T0073546.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137498532 137556517 - MGP_WSBEiJ_P0073546 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073547.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137498674 137500065 - Gtf2i protein_coding retained_intron MGP_WSBEiJ_T0073548.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137499656 137503772 - Gtf2i protein_coding retained_intron MGP_WSBEiJ_T0073549.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137501771 137502764 - Gtf2i protein_coding retained_intron MGP_WSBEiJ_T0073550.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137515868 137532543 - Gtf2i protein_coding retained_intron MGP_WSBEiJ_T0073551.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137515894 137556467 - MGP_WSBEiJ_P0073551 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073552.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137518089 137519418 - Gtf2i protein_coding processed_transcript MGP_WSBEiJ_T0073553.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137519183 137525690 - Gtf2i protein_coding processed_transcript MGP_WSBEiJ_T0073554.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137523608 137534948 - Gtf2i protein_coding processed_transcript MGP_WSBEiJ_T0073555.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137548122 137575996 - MGP_WSBEiJ_P0073555 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073556.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137548153 137573344 - MGP_WSBEiJ_P0073556 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073557.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137548153 137573639 - MGP_WSBEiJ_P0073557 Gtf2i protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073558.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137548179 137576210 - MGP_WSBEiJ_P0073558 Gtf2i protein_coding protein_coding MGP_WSBEiJ_T0073559.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137548233 137576210 - MGP_WSBEiJ_P0073559 Gtf2i protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073560.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137550254 137568252 - Gtf2i protein_coding retained_intron MGP_WSBEiJ_T0073561.1 MGP_WSBEiJ_G0029332.1 mouse_genomes_project 5 137555919 137558081 - Gtf2i protein_coding retained_intron MGP_WSBEiJ_T0072904.1 MGP_WSBEiJ_G0029228.1 mouse_genomes_project 5 124947650 124959824 + Arpc3 protein_coding retained_intron MGP_WSBEiJ_T0072905.1 MGP_WSBEiJ_G0029228.1 mouse_genomes_project 5 124947694 124953022 + Arpc3 protein_coding retained_intron MGP_WSBEiJ_T0072906.1 MGP_WSBEiJ_G0029228.1 mouse_genomes_project 5 124947720 124968514 + MGP_WSBEiJ_P0072906 Arpc3 protein_coding protein_coding MGP_WSBEiJ_T0072907.1 MGP_WSBEiJ_G0029228.1 mouse_genomes_project 5 124952695 124975520 + MGP_WSBEiJ_P0072907 Arpc3 protein_coding protein_coding MGP_WSBEiJ_T0072908.1 MGP_WSBEiJ_G0029228.1 mouse_genomes_project 5 124957776 124963613 + MGP_WSBEiJ_P0072908 Arpc3 protein_coding protein_coding MGP_WSBEiJ_T0072909.1 MGP_WSBEiJ_G0029228.1 mouse_genomes_project 5 124957903 124963604 + MGP_WSBEiJ_P0072909 Arpc3 protein_coding protein_coding MGP_WSBEiJ_T0072910.1 MGP_WSBEiJ_G0029228.1 mouse_genomes_project 5 124960911 124962285 + Arpc3 protein_coding retained_intron MGP_WSBEiJ_T0097399.1 MGP_WSBEiJ_G0036073.1 mouse_genomes_project 5 383886 384638 + Gm43017 sense_intronic sense_intronic MGP_WSBEiJ_T0001405.1 MGP_WSBEiJ_G0001333.1 mouse_genomes_project 5 5956155 5956386 + TEC TEC MGP_WSBEiJ_T0100853.1 MGP_WSBEiJ_G0039311.1 mouse_genomes_project 5 77291469 77293258 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0074694.1 MGP_WSBEiJ_G0029563.1 mouse_genomes_project 5 151696611 151705800 - MGP_WSBEiJ_P0074694 Urad protein_coding protein_coding MGP_WSBEiJ_T0001804.1 MGP_WSBEiJ_G0001725.1 mouse_genomes_project 5 133957015 133960405 - TEC TEC MGP_WSBEiJ_T0099624.1 MGP_WSBEiJ_G0038287.1 mouse_genomes_project 5 148881495 148881623 + Gm23995 snoRNA snoRNA MGP_WSBEiJ_T0008031.1 MGP_WSBEiJ_G0006553.1 mouse_genomes_project 5 72638966 72655171 - 1700025M24Rik lincRNA lincRNA MGP_WSBEiJ_T0008032.1 MGP_WSBEiJ_G0006553.1 mouse_genomes_project 5 72638966 72655159 - 1700025M24Rik lincRNA lincRNA MGP_WSBEiJ_T0008033.1 MGP_WSBEiJ_G0006553.1 mouse_genomes_project 5 72638984 72655165 - 1700025M24Rik lincRNA lincRNA MGP_WSBEiJ_T0001685.1 MGP_WSBEiJ_G0001607.1 mouse_genomes_project 5 98626852 98629285 + TEC TEC MGP_WSBEiJ_T0074802.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154173040 154194928 - MGP_WSBEiJ_P0074802 Hsph1 protein_coding protein_coding MGP_WSBEiJ_T0074803.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154175297 154195095 - MGP_WSBEiJ_P0074803 Hsph1 protein_coding protein_coding MGP_WSBEiJ_T0074804.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154175598 154194966 - MGP_WSBEiJ_P0074804 Hsph1 protein_coding protein_coding MGP_WSBEiJ_T0074805.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154175922 154195095 - MGP_WSBEiJ_P0074805 Hsph1 protein_coding protein_coding MGP_WSBEiJ_T0074806.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154176208 154177927 - Hsph1 protein_coding retained_intron MGP_WSBEiJ_T0074807.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154178645 154179940 - Hsph1 protein_coding retained_intron MGP_WSBEiJ_T0074808.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154179434 154195095 - Hsph1 protein_coding retained_intron MGP_WSBEiJ_T0074809.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154188746 154195133 - MGP_WSBEiJ_P0074809 Hsph1 protein_coding protein_coding MGP_WSBEiJ_T0074810.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154189202 154195047 - MGP_WSBEiJ_P0074810 Hsph1 protein_coding protein_coding MGP_WSBEiJ_T0074811.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154190801 154195108 - MGP_WSBEiJ_P0074811 Hsph1 protein_coding protein_coding MGP_WSBEiJ_T0074812.1 MGP_WSBEiJ_G0029580.1 mouse_genomes_project 5 154190860 154192644 - Hsph1 protein_coding processed_transcript MGP_WSBEiJ_T0097409.1 MGP_WSBEiJ_G0036083.1 mouse_genomes_project 5 28552351 28555221 + Gm19409 sense_intronic sense_intronic MGP_WSBEiJ_T0070858.1 MGP_WSBEiJ_G0028803.1 mouse_genomes_project 5 71884234 71886038 - MGP_WSBEiJ_P0070858 Slc10a4 protein_coding protein_coding MGP_WSBEiJ_T0004672.1 MGP_WSBEiJ_G0004036.1 mouse_genomes_project 5 101599644 101607542 - 4930458D05Rik antisense antisense MGP_WSBEiJ_T0073782.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139440359 139480499 + MGP_WSBEiJ_P0073782 Dtx2 protein_coding protein_coding MGP_WSBEiJ_T0073783.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139440370 139480491 + MGP_WSBEiJ_P0073783 Dtx2 protein_coding protein_coding MGP_WSBEiJ_T0073784.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139440403 139480498 + MGP_WSBEiJ_P0073784 Dtx2 protein_coding protein_coding MGP_WSBEiJ_T0073785.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139440406 139458893 + MGP_WSBEiJ_P0073785 Dtx2 protein_coding protein_coding MGP_WSBEiJ_T0073786.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139440417 139480493 + MGP_WSBEiJ_P0073786 Dtx2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073787.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139440436 139480491 + MGP_WSBEiJ_P0073787 Dtx2 protein_coding protein_coding MGP_WSBEiJ_T0073788.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139440441 139456793 + MGP_WSBEiJ_P0073788 Dtx2 protein_coding protein_coding MGP_WSBEiJ_T0073789.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139440660 139441961 + Dtx2 protein_coding processed_transcript MGP_WSBEiJ_T0073790.1 MGP_WSBEiJ_G0029373.1 mouse_genomes_project 5 139466329 139480491 + Dtx2 protein_coding retained_intron MGP_WSBEiJ_T0014507.1 MGP_WSBEiJ_G0012637.1 mouse_genomes_project 5 32031599 32031930 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069000.1 MGP_WSBEiJ_G0028485.1 mouse_genomes_project 5 6247373 6461935 + MGP_WSBEiJ_P0069000 9330182L06Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069001.1 MGP_WSBEiJ_G0028485.1 mouse_genomes_project 5 6247382 6444245 + MGP_WSBEiJ_P0069001 9330182L06Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069002.1 MGP_WSBEiJ_G0028485.1 mouse_genomes_project 5 6247385 6387136 + 9330182L06Rik protein_coding retained_intron MGP_WSBEiJ_T0069003.1 MGP_WSBEiJ_G0028485.1 mouse_genomes_project 5 6247387 6462916 + MGP_WSBEiJ_P0069003 9330182L06Rik protein_coding protein_coding MGP_WSBEiJ_T0069004.1 MGP_WSBEiJ_G0028485.1 mouse_genomes_project 5 6247387 6444629 + MGP_WSBEiJ_P0069004 9330182L06Rik protein_coding protein_coding MGP_WSBEiJ_T0069005.1 MGP_WSBEiJ_G0028485.1 mouse_genomes_project 5 6247404 6464024 + MGP_WSBEiJ_P0069005 9330182L06Rik protein_coding protein_coding MGP_WSBEiJ_T0069006.1 MGP_WSBEiJ_G0028485.1 mouse_genomes_project 5 6247430 6442135 + MGP_WSBEiJ_P0069006 9330182L06Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069007.1 MGP_WSBEiJ_G0028485.1 mouse_genomes_project 5 6398567 6403024 + 9330182L06Rik protein_coding retained_intron MGP_WSBEiJ_T0010503.1 MGP_WSBEiJ_G0008660.1 mouse_genomes_project 5 32545216 32545279 + Mir7036b miRNA miRNA MGP_WSBEiJ_T0073123.1 MGP_WSBEiJ_G0029257.1 mouse_genomes_project 5 126560546 126562474 - MGP_WSBEiJ_P0073123 Hcar2 protein_coding protein_coding MGP_WSBEiJ_T0074544.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148874972 148875857 + Trrap protein_coding processed_transcript MGP_WSBEiJ_T0074545.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148875088 148966788 + MGP_WSBEiJ_P0074545 Trrap protein_coding unknown_likely_coding MGP_WSBEiJ_T0074546.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148875257 148894953 + Trrap protein_coding retained_intron MGP_WSBEiJ_T0074547.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148875709 148884206 + MGP_WSBEiJ_P0074547 Trrap protein_coding protein_coding MGP_WSBEiJ_T0074548.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148875959 148966781 + MGP_WSBEiJ_P0074548 Trrap protein_coding protein_coding MGP_WSBEiJ_T0074549.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148878248 148966754 + MGP_WSBEiJ_P0074549 Trrap protein_coding protein_coding MGP_WSBEiJ_T0074550.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148878248 148966779 + MGP_WSBEiJ_P0074550 Trrap protein_coding protein_coding MGP_WSBEiJ_T0074551.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148892634 148966779 + MGP_WSBEiJ_P0074551 Trrap protein_coding protein_coding MGP_WSBEiJ_T0074552.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148898797 148900976 + Trrap protein_coding retained_intron MGP_WSBEiJ_T0074553.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148912037 148941708 + Trrap protein_coding retained_intron MGP_WSBEiJ_T0074554.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148919374 148921122 + Trrap protein_coding retained_intron MGP_WSBEiJ_T0074555.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148927111 148930385 + Trrap protein_coding retained_intron MGP_WSBEiJ_T0074556.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148946198 148947658 + Trrap protein_coding retained_intron MGP_WSBEiJ_T0074557.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148962819 148966780 + Trrap protein_coding retained_intron MGP_WSBEiJ_T0074558.1 MGP_WSBEiJ_G0029527.1 mouse_genomes_project 5 148964292 148966346 + Trrap protein_coding processed_transcript MGP_WSBEiJ_T0074695.1 MGP_WSBEiJ_G0029564.1 mouse_genomes_project 5 151713743 151790982 - MGP_WSBEiJ_P0074695 Flt3 protein_coding protein_coding MGP_WSBEiJ_T0074696.1 MGP_WSBEiJ_G0029564.1 mouse_genomes_project 5 151750469 151790982 - Flt3 protein_coding processed_transcript MGP_WSBEiJ_T0014491.1 MGP_WSBEiJ_G0012621.1 mouse_genomes_project 5 27546853 27547541 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014704.1 MGP_WSBEiJ_G0012834.1 mouse_genomes_project 5 125375894 125387377 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069439.1 MGP_WSBEiJ_G0028571.1 mouse_genomes_project 5 27872543 27875702 - MGP_WSBEiJ_P0069439 3110082J24Rik protein_coding protein_coding MGP_WSBEiJ_T0069440.1 MGP_WSBEiJ_G0028571.1 mouse_genomes_project 5 27872848 27874973 - MGP_WSBEiJ_P0069440 3110082J24Rik protein_coding protein_coding MGP_WSBEiJ_T0014765.1 MGP_WSBEiJ_G0012895.1 mouse_genomes_project 5 153088701 153088879 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008063.1 MGP_WSBEiJ_G0006577.1 mouse_genomes_project 5 86730103 86821866 + Gm43055 lincRNA lincRNA MGP_WSBEiJ_T0001529.1 MGP_WSBEiJ_G0001453.1 mouse_genomes_project 5 47358908 47360203 - TEC TEC MGP_WSBEiJ_T0001703.1 MGP_WSBEiJ_G0001625.1 mouse_genomes_project 5 106901738 106904000 + TEC TEC MGP_WSBEiJ_T0014736.1 MGP_WSBEiJ_G0012866.1 mouse_genomes_project 5 144400164 144400497 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071109.1 MGP_WSBEiJ_G0028847.1 mouse_genomes_project 5 76947547 77014850 - MGP_WSBEiJ_P0071109 Igfbp7 protein_coding protein_coding MGP_WSBEiJ_T0071110.1 MGP_WSBEiJ_G0028847.1 mouse_genomes_project 5 76947555 77014849 - MGP_WSBEiJ_P0071110 Igfbp7 protein_coding protein_coding MGP_WSBEiJ_T0074035.1 MGP_WSBEiJ_G0029416.1 mouse_genomes_project 5 141219277 141222780 - MGP_WSBEiJ_P0074035 Irs3 protein_coding protein_coding MGP_WSBEiJ_T0074036.1 MGP_WSBEiJ_G0029416.1 mouse_genomes_project 5 141219278 141222957 - MGP_WSBEiJ_P0074036 Irs3 protein_coding protein_coding MGP_WSBEiJ_T0100871.1 MGP_WSBEiJ_G0039329.1 mouse_genomes_project 5 146534149 146534678 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0071553.1 MGP_WSBEiJ_G0028960.1 mouse_genomes_project 5 98792224 98800206 + MGP_WSBEiJ_P0071553 Prdm8 protein_coding protein_coding MGP_WSBEiJ_T0014497.1 MGP_WSBEiJ_G0012627.1 mouse_genomes_project 5 30323680 30324006 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001768.1 MGP_WSBEiJ_G0001690.1 mouse_genomes_project 5 125054886 125057753 - TEC TEC MGP_WSBEiJ_T0014723.1 MGP_WSBEiJ_G0012853.1 mouse_genomes_project 5 141478497 141479249 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001471.1 MGP_WSBEiJ_G0001396.1 mouse_genomes_project 5 33390770 33391225 + TEC TEC MGP_WSBEiJ_T0100876.1 MGP_WSBEiJ_G0039334.1 mouse_genomes_project 5 150166452 150174929 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0074727.1 MGP_WSBEiJ_G0029567.1 mouse_genomes_project 5 152284348 152286544 + Pomp protein_coding retained_intron MGP_WSBEiJ_T0074728.1 MGP_WSBEiJ_G0029567.1 mouse_genomes_project 5 152284364 152296830 + MGP_WSBEiJ_P0074728 Pomp protein_coding protein_coding MGP_WSBEiJ_T0074729.1 MGP_WSBEiJ_G0029567.1 mouse_genomes_project 5 152284400 152299316 + MGP_WSBEiJ_P0074729 Pomp protein_coding protein_coding MGP_WSBEiJ_T0074730.1 MGP_WSBEiJ_G0029567.1 mouse_genomes_project 5 152294144 152299396 + Pomp protein_coding processed_transcript MGP_WSBEiJ_T0074731.1 MGP_WSBEiJ_G0029567.1 mouse_genomes_project 5 152296196 152299354 + Pomp protein_coding retained_intron MGP_WSBEiJ_T0070793.1 MGP_WSBEiJ_G0028787.1 mouse_genomes_project 5 67177734 67211853 + MGP_WSBEiJ_P0070793 Gm5108 protein_coding protein_coding MGP_WSBEiJ_T0070794.1 MGP_WSBEiJ_G0028787.1 mouse_genomes_project 5 67177804 67211783 + Gm5108 protein_coding antisense MGP_WSBEiJ_T0070795.1 MGP_WSBEiJ_G0028787.1 mouse_genomes_project 5 67177804 67211788 + Gm5108 protein_coding antisense MGP_WSBEiJ_T0073909.1 MGP_WSBEiJ_G0029394.1 mouse_genomes_project 5 140650887 140662907 - MGP_WSBEiJ_P0073909 Trim56 protein_coding protein_coding MGP_WSBEiJ_T0073910.1 MGP_WSBEiJ_G0029394.1 mouse_genomes_project 5 140660723 140662909 - MGP_WSBEiJ_P0073910 Trim56 protein_coding protein_coding MGP_WSBEiJ_T0071367.1 MGP_WSBEiJ_G0028919.1 mouse_genomes_project 5 91212778 91214647 + MGP_WSBEiJ_P0071367 Cxcl1 protein_coding protein_coding MGP_WSBEiJ_T0071368.1 MGP_WSBEiJ_G0028919.1 mouse_genomes_project 5 91212780 91214645 + Cxcl1 protein_coding retained_intron MGP_WSBEiJ_T0011402.1 MGP_WSBEiJ_G0009559.1 mouse_genomes_project 5 101168412 101168591 + Gm27286 misc_RNA misc_RNA MGP_WSBEiJ_T0004646.1 MGP_WSBEiJ_G0004019.1 mouse_genomes_project 5 86730096 86761392 + Gm16579 antisense antisense MGP_WSBEiJ_T0069547.1 MGP_WSBEiJ_G0028591.1 mouse_genomes_project 5 28671830 28684493 - MGP_WSBEiJ_P0069547 Cgref1 protein_coding protein_coding MGP_WSBEiJ_T0069548.1 MGP_WSBEiJ_G0028591.1 mouse_genomes_project 5 28673905 28684308 - Cgref1 protein_coding retained_intron MGP_WSBEiJ_T0073836.1 MGP_WSBEiJ_G0029382.1 mouse_genomes_project 5 139689984 139720776 - MGP_WSBEiJ_P0073836 Sh2b2 protein_coding protein_coding MGP_WSBEiJ_T0073837.1 MGP_WSBEiJ_G0029382.1 mouse_genomes_project 5 139689986 139720825 - MGP_WSBEiJ_P0073837 Sh2b2 protein_coding protein_coding MGP_WSBEiJ_T0073838.1 MGP_WSBEiJ_G0029382.1 mouse_genomes_project 5 139692204 139694494 - Sh2b2 protein_coding retained_intron MGP_WSBEiJ_T0073839.1 MGP_WSBEiJ_G0029382.1 mouse_genomes_project 5 139695600 139720759 - MGP_WSBEiJ_P0073839 Sh2b2 protein_coding protein_coding MGP_WSBEiJ_T0073840.1 MGP_WSBEiJ_G0029382.1 mouse_genomes_project 5 139707044 139722478 - MGP_WSBEiJ_P0073840 Sh2b2 protein_coding protein_coding MGP_WSBEiJ_T0071026.1 MGP_WSBEiJ_G0028832.1 mouse_genomes_project 5 75844399 75876407 - MGP_WSBEiJ_P0071026 Nmu protein_coding protein_coding MGP_WSBEiJ_T0010543.1 MGP_WSBEiJ_G0008700.1 mouse_genomes_project 5 126183336 126183395 - Mir7647 miRNA miRNA MGP_WSBEiJ_T0069210.1 MGP_WSBEiJ_G0028524.1 mouse_genomes_project 5 21633998 21700911 + MGP_WSBEiJ_P0069210 Klhl7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069211.1 MGP_WSBEiJ_G0028524.1 mouse_genomes_project 5 21634040 21669056 + Klhl7 protein_coding retained_intron MGP_WSBEiJ_T0069212.1 MGP_WSBEiJ_G0028524.1 mouse_genomes_project 5 21634147 21703504 + MGP_WSBEiJ_P0069212 Klhl7 protein_coding protein_coding MGP_WSBEiJ_T0004704.1 MGP_WSBEiJ_G0004058.1 mouse_genomes_project 5 116500482 116501049 - Gm42789 antisense antisense MGP_WSBEiJ_T0004684.1 MGP_WSBEiJ_G0004041.1 mouse_genomes_project 5 106837180 106843939 - Lrrc8dos antisense antisense MGP_WSBEiJ_T0004607.1 MGP_WSBEiJ_G0003987.1 mouse_genomes_project 5 42870280 42891921 + Gm43507 antisense antisense MGP_WSBEiJ_T0004608.1 MGP_WSBEiJ_G0003987.1 mouse_genomes_project 5 42882939 42893332 + Gm43507 antisense antisense MGP_WSBEiJ_T0071894.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189051 109235387 + Mtf2 protein_coding processed_transcript MGP_WSBEiJ_T0071895.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189088 109235682 + MGP_WSBEiJ_P0071895 Mtf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071896.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189093 109235848 + Mtf2 protein_coding processed_transcript MGP_WSBEiJ_T0071897.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189093 109236493 + Mtf2 protein_coding processed_transcript MGP_WSBEiJ_T0071898.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189094 109192961 + Mtf2 protein_coding retained_intron MGP_WSBEiJ_T0071899.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189106 109215041 + MGP_WSBEiJ_P0071899 Mtf2 protein_coding protein_coding MGP_WSBEiJ_T0071900.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189119 109235222 + MGP_WSBEiJ_P0071900 Mtf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071901.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189119 109236494 + MGP_WSBEiJ_P0071901 Mtf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071902.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189119 109237228 + MGP_WSBEiJ_P0071902 Mtf2 protein_coding protein_coding MGP_WSBEiJ_T0071903.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189121 109221790 + MGP_WSBEiJ_P0071903 Mtf2 protein_coding protein_coding MGP_WSBEiJ_T0071904.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189121 109235309 + MGP_WSBEiJ_P0071904 Mtf2 protein_coding protein_coding MGP_WSBEiJ_T0071905.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109189134 109215630 + Mtf2 protein_coding processed_transcript MGP_WSBEiJ_T0071906.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109198048 109206297 + Mtf2 protein_coding processed_transcript MGP_WSBEiJ_T0071907.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109203273 109235694 + Mtf2 protein_coding processed_transcript MGP_WSBEiJ_T0071908.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109212894 109229003 + MGP_WSBEiJ_P0071908 Mtf2 protein_coding protein_coding MGP_WSBEiJ_T0071909.1 MGP_WSBEiJ_G0029034.1 mouse_genomes_project 5 109219725 109232215 + MGP_WSBEiJ_P0071909 Mtf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072587.1 MGP_WSBEiJ_G0029165.1 mouse_genomes_project 5 119327794 119367628 + MGP_WSBEiJ_P0072587 Vsig10 protein_coding protein_coding MGP_WSBEiJ_T0072588.1 MGP_WSBEiJ_G0029165.1 mouse_genomes_project 5 119328003 119365734 + MGP_WSBEiJ_P0072588 Vsig10 protein_coding protein_coding MGP_WSBEiJ_T0072589.1 MGP_WSBEiJ_G0029165.1 mouse_genomes_project 5 119328029 119351671 + Vsig10 protein_coding retained_intron MGP_WSBEiJ_T0072590.1 MGP_WSBEiJ_G0029165.1 mouse_genomes_project 5 119328072 119336570 + Vsig10 protein_coding retained_intron MGP_WSBEiJ_T0072591.1 MGP_WSBEiJ_G0029165.1 mouse_genomes_project 5 119335016 119367620 + Vsig10 protein_coding processed_transcript MGP_WSBEiJ_T0072592.1 MGP_WSBEiJ_G0029165.1 mouse_genomes_project 5 119362532 119367628 + Vsig10 protein_coding processed_transcript MGP_WSBEiJ_T0007962.1 MGP_WSBEiJ_G0006502.1 mouse_genomes_project 5 33356228 33362143 + 4930478P22Rik lincRNA lincRNA MGP_WSBEiJ_T0007963.1 MGP_WSBEiJ_G0006502.1 mouse_genomes_project 5 33356240 33362380 + 4930478P22Rik lincRNA lincRNA MGP_WSBEiJ_T0007964.1 MGP_WSBEiJ_G0006502.1 mouse_genomes_project 5 33356246 33361605 + 4930478P22Rik lincRNA lincRNA MGP_WSBEiJ_T0004641.1 MGP_WSBEiJ_G0004015.1 mouse_genomes_project 5 76499323 76499801 + antisense antisense MGP_WSBEiJ_T0004642.1 MGP_WSBEiJ_G0004015.1 mouse_genomes_project 5 76499563 76509700 + antisense antisense MGP_WSBEiJ_T0070938.1 MGP_WSBEiJ_G0028816.1 mouse_genomes_project 5 73023296 73038288 - MGP_WSBEiJ_P0070938 Sgcb protein_coding protein_coding MGP_WSBEiJ_T0070939.1 MGP_WSBEiJ_G0028816.1 mouse_genomes_project 5 73034508 73034971 - Sgcb protein_coding retained_intron MGP_WSBEiJ_T0071187.1 MGP_WSBEiJ_G0028862.1 mouse_genomes_project 5 86704172 86746919 - MGP_WSBEiJ_P0071187 Tmprss11e protein_coding protein_coding MGP_WSBEiJ_T0014588.1 MGP_WSBEiJ_G0012718.1 mouse_genomes_project 5 72860831 72861738 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014589.1 MGP_WSBEiJ_G0012719.1 mouse_genomes_project 5 74316495 74317396 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014434.1 MGP_WSBEiJ_G0012564.1 mouse_genomes_project 5 13027425 13027669 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071960.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109822480 109836599 - Dgkq protein_coding retained_intron MGP_WSBEiJ_T0071961.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109822480 109845571 - MGP_WSBEiJ_P0071961 Dgkq protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071962.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109822480 109836599 - MGP_WSBEiJ_P0071962 Dgkq protein_coding protein_coding MGP_WSBEiJ_T0071963.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109822480 109836599 - MGP_WSBEiJ_P0071963 Dgkq protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071964.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109822480 109836599 - MGP_WSBEiJ_P0071964 Dgkq protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071965.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109822834 109836599 - Dgkq protein_coding retained_intron MGP_WSBEiJ_T0071966.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109822834 109829436 - Dgkq protein_coding retained_intron MGP_WSBEiJ_T0071967.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109823061 109825715 - Dgkq protein_coding retained_intron MGP_WSBEiJ_T0071968.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109826644 109829280 - Dgkq protein_coding retained_intron MGP_WSBEiJ_T0071969.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109829280 109830921 - Dgkq protein_coding retained_intron MGP_WSBEiJ_T0071970.1 MGP_WSBEiJ_G0029046.1 mouse_genomes_project 5 109830331 109831785 - Dgkq protein_coding retained_intron MGP_WSBEiJ_T0069258.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21983535 21990290 - MGP_WSBEiJ_P0069258 Fastk protein_coding protein_coding MGP_WSBEiJ_T0069259.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21983536 21990282 - Fastk protein_coding retained_intron MGP_WSBEiJ_T0069261.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21986137 21987314 - Fastk protein_coding retained_intron MGP_WSBEiJ_T0069262.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21986137 21990383 - MGP_WSBEiJ_P0069262 Fastk protein_coding protein_coding MGP_WSBEiJ_T0069263.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21986137 21990302 - MGP_WSBEiJ_P0069263 Fastk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069264.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21986138 21990283 - Fastk protein_coding retained_intron MGP_WSBEiJ_T0069265.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21986138 21986623 - Fastk protein_coding retained_intron MGP_WSBEiJ_T0069266.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21986141 21990304 - MGP_WSBEiJ_P0069266 Fastk protein_coding protein_coding MGP_WSBEiJ_T0069267.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21986626 21987200 - Fastk protein_coding retained_intron MGP_WSBEiJ_T0069268.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21986718 21987397 - Fastk protein_coding processed_transcript MGP_WSBEiJ_T0069269.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21987022 21989057 - Fastk protein_coding retained_intron MGP_WSBEiJ_T0069270.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21987169 21990334 - Fastk protein_coding processed_transcript MGP_WSBEiJ_T0069271.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21988399 21990304 - Fastk protein_coding retained_intron MGP_WSBEiJ_T0069272.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21988467 21990293 - Fastk protein_coding processed_transcript MGP_WSBEiJ_T0069273.1 MGP_WSBEiJ_G0028533.1 mouse_genomes_project 5 21989029 21990293 - Fastk protein_coding processed_transcript MGP_WSBEiJ_T0004651.1 MGP_WSBEiJ_G0004023.1 mouse_genomes_project 5 88759653 88759973 + antisense antisense MGP_WSBEiJ_T0004617.1 MGP_WSBEiJ_G0003994.1 mouse_genomes_project 5 52017968 52021440 - Gm10441 antisense antisense MGP_WSBEiJ_T0099595.1 MGP_WSBEiJ_G0038258.1 mouse_genomes_project 5 61475906 61476038 - Gm24079 snoRNA snoRNA MGP_WSBEiJ_T0014549.1 MGP_WSBEiJ_G0012679.1 mouse_genomes_project 5 56902109 56902331 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074191.1 MGP_WSBEiJ_G0029449.1 mouse_genomes_project 5 142512056 142514063 + Gm5294 protein_coding unprocessed_pseudogene MGP_WSBEiJ_T0074192.1 MGP_WSBEiJ_G0029449.1 mouse_genomes_project 5 142512766 142514306 + MGP_WSBEiJ_P0074192 Gm5294 protein_coding protein_coding MGP_WSBEiJ_T0097074.1 MGP_WSBEiJ_G0035755.1 mouse_genomes_project 5 134711326 134711449 + Gm27266 rRNA rRNA MGP_WSBEiJ_T0001446.1 MGP_WSBEiJ_G0001373.1 mouse_genomes_project 5 26968717 26973009 - TEC TEC MGP_WSBEiJ_T0004742.1 MGP_WSBEiJ_G0004085.1 mouse_genomes_project 5 125150657 125154015 + Gm43301 antisense antisense MGP_WSBEiJ_T0069926.1 MGP_WSBEiJ_G0028647.1 mouse_genomes_project 5 31946891 31953482 - Poln protein_coding processed_transcript MGP_WSBEiJ_T0069927.1 MGP_WSBEiJ_G0028647.1 mouse_genomes_project 5 31946901 31987793 - Poln protein_coding processed_transcript MGP_WSBEiJ_T0069928.1 MGP_WSBEiJ_G0028647.1 mouse_genomes_project 5 31946910 32115403 - MGP_WSBEiJ_P0069928 Poln protein_coding protein_coding MGP_WSBEiJ_T0069929.1 MGP_WSBEiJ_G0028647.1 mouse_genomes_project 5 31946910 32115403 - MGP_WSBEiJ_P0069929 Poln protein_coding protein_coding MGP_WSBEiJ_T0069930.1 MGP_WSBEiJ_G0028647.1 mouse_genomes_project 5 31946995 32115381 - MGP_WSBEiJ_P0069930 Poln protein_coding protein_coding MGP_WSBEiJ_T0069931.1 MGP_WSBEiJ_G0028647.1 mouse_genomes_project 5 31954272 32044854 - Poln protein_coding processed_transcript MGP_WSBEiJ_T0069932.1 MGP_WSBEiJ_G0028647.1 mouse_genomes_project 5 31972813 32044798 - Poln protein_coding processed_transcript MGP_WSBEiJ_T0069933.1 MGP_WSBEiJ_G0028647.1 mouse_genomes_project 5 32040790 32044870 - Poln protein_coding retained_intron MGP_WSBEiJ_T0004597.1 MGP_WSBEiJ_G0003981.1 mouse_genomes_project 5 41342760 41420939 - Gm7854 antisense antisense MGP_WSBEiJ_T0004598.1 MGP_WSBEiJ_G0003981.1 mouse_genomes_project 5 41342760 41420569 - Gm7854 antisense antisense MGP_WSBEiJ_T0004599.1 MGP_WSBEiJ_G0003981.1 mouse_genomes_project 5 41420585 41420936 - Gm7854 antisense antisense MGP_WSBEiJ_T0074366.1 MGP_WSBEiJ_G0029486.1 mouse_genomes_project 5 146366963 146385093 + MGP_WSBEiJ_P0074366 Foxk1 protein_coding protein_coding MGP_WSBEiJ_T0074367.1 MGP_WSBEiJ_G0029486.1 mouse_genomes_project 5 146366966 146432758 + MGP_WSBEiJ_P0074367 Foxk1 protein_coding protein_coding MGP_WSBEiJ_T0011410.1 MGP_WSBEiJ_G0009567.1 mouse_genomes_project 5 113783735 113783870 - Gm27357 misc_RNA misc_RNA MGP_WSBEiJ_T0008202.1 MGP_WSBEiJ_G0006673.1 mouse_genomes_project 5 121061777 121070656 + Gm43342 lincRNA lincRNA MGP_WSBEiJ_T0070988.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74596074 74633529 + MGP_WSBEiJ_P0070988 Pdgfra protein_coding protein_coding MGP_WSBEiJ_T0070989.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74596088 74649079 + MGP_WSBEiJ_P0070989 Pdgfra protein_coding protein_coding MGP_WSBEiJ_T0070990.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74596134 74623820 + MGP_WSBEiJ_P0070990 Pdgfra protein_coding non_stop_decay MGP_WSBEiJ_T0070991.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74596717 74634144 + MGP_WSBEiJ_P0070991 Pdgfra protein_coding protein_coding MGP_WSBEiJ_T0070992.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74597368 74611350 + Pdgfra protein_coding retained_intron MGP_WSBEiJ_T0070993.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74598846 74612378 + MGP_WSBEiJ_P0070993 Pdgfra protein_coding protein_coding MGP_WSBEiJ_T0070994.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74603501 74649065 + MGP_WSBEiJ_P0070994 Pdgfra protein_coding protein_coding MGP_WSBEiJ_T0070995.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74604426 74615181 + MGP_WSBEiJ_P0070995 Pdgfra protein_coding protein_coding MGP_WSBEiJ_T0070996.1 MGP_WSBEiJ_G0028825.1 mouse_genomes_project 5 74610463 74616559 + MGP_WSBEiJ_P0070996 Pdgfra protein_coding protein_coding MGP_WSBEiJ_T0004657.1 MGP_WSBEiJ_G0004029.1 mouse_genomes_project 5 98794375 98797209 - A730035I17Rik antisense antisense MGP_WSBEiJ_T0004658.1 MGP_WSBEiJ_G0004029.1 mouse_genomes_project 5 98794391 98796435 - A730035I17Rik antisense antisense MGP_WSBEiJ_T0004659.1 MGP_WSBEiJ_G0004029.1 mouse_genomes_project 5 98795278 98797007 - A730035I17Rik antisense antisense MGP_WSBEiJ_T0004660.1 MGP_WSBEiJ_G0004029.1 mouse_genomes_project 5 98795701 98796438 - A730035I17Rik antisense antisense MGP_WSBEiJ_T0004661.1 MGP_WSBEiJ_G0004029.1 mouse_genomes_project 5 98796520 98797209 - A730035I17Rik antisense pseudogene MGP_WSBEiJ_T0001449.1 MGP_WSBEiJ_G0001376.1 mouse_genomes_project 5 28636071 28638327 + TEC TEC MGP_WSBEiJ_T0070251.1 MGP_WSBEiJ_G0028698.1 mouse_genomes_project 5 36341720 36352191 + MGP_WSBEiJ_P0070251 Tmem128 protein_coding protein_coding MGP_WSBEiJ_T0070252.1 MGP_WSBEiJ_G0028698.1 mouse_genomes_project 5 36341906 36343826 + Tmem128 protein_coding retained_intron MGP_WSBEiJ_T0070253.1 MGP_WSBEiJ_G0028698.1 mouse_genomes_project 5 36341919 36350486 + MGP_WSBEiJ_P0070253 Tmem128 protein_coding protein_coding MGP_WSBEiJ_T0070254.1 MGP_WSBEiJ_G0028698.1 mouse_genomes_project 5 36341923 36347970 + Tmem128 protein_coding retained_intron MGP_WSBEiJ_T0070255.1 MGP_WSBEiJ_G0028698.1 mouse_genomes_project 5 36347480 36350483 + MGP_WSBEiJ_P0070255 Tmem128 protein_coding protein_coding MGP_WSBEiJ_T0014642.1 MGP_WSBEiJ_G0012772.1 mouse_genomes_project 5 101341937 101342290 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072203.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114687029 114692294 - MGP_WSBEiJ_P0072203 Crybb3 protein_coding protein_coding MGP_WSBEiJ_T0072204.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114687029 114691851 - MGP_WSBEiJ_P0072204 Crybb3 protein_coding protein_coding MGP_WSBEiJ_T0072205.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114687029 114692768 - MGP_WSBEiJ_P0072205 Crybb3 protein_coding protein_coding MGP_WSBEiJ_T0072206.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114687033 114692294 - MGP_WSBEiJ_P0072206 Crybb3 protein_coding protein_coding MGP_WSBEiJ_T0072207.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114687037 114692767 - MGP_WSBEiJ_P0072207 Crybb3 protein_coding protein_coding MGP_WSBEiJ_T0072208.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114688211 114691575 - Crybb3 protein_coding retained_intron MGP_WSBEiJ_T0072209.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114688476 114691850 - Crybb3 protein_coding retained_intron MGP_WSBEiJ_T0072210.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114689574 114691837 - MGP_WSBEiJ_P0072210 Crybb3 protein_coding protein_coding MGP_WSBEiJ_T0072211.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114689657 114692763 - MGP_WSBEiJ_P0072211 Crybb3 protein_coding protein_coding MGP_WSBEiJ_T0072212.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114689723 114692764 - Crybb3 protein_coding processed_transcript MGP_WSBEiJ_T0072213.1 MGP_WSBEiJ_G0029094.1 mouse_genomes_project 5 114690940 114692243 - MGP_WSBEiJ_P0072213 Crybb3 protein_coding protein_coding MGP_WSBEiJ_T0001479.1 MGP_WSBEiJ_G0001404.1 mouse_genomes_project 5 37580342 37581911 - TEC TEC MGP_WSBEiJ_T0007919.1 MGP_WSBEiJ_G0006474.1 mouse_genomes_project 5 13053455 13063065 - Gm3510 lincRNA lincRNA MGP_WSBEiJ_T0074476.1 MGP_WSBEiJ_G0029510.1 mouse_genomes_project 5 147691095 147696024 + Cyth3 protein_coding retained_intron MGP_WSBEiJ_T0074477.1 MGP_WSBEiJ_G0029510.1 mouse_genomes_project 5 147691234 147788183 + MGP_WSBEiJ_P0074477 Cyth3 protein_coding protein_coding MGP_WSBEiJ_T0074478.1 MGP_WSBEiJ_G0029510.1 mouse_genomes_project 5 147702660 147765729 + MGP_WSBEiJ_P0074478 Cyth3 protein_coding protein_coding MGP_WSBEiJ_T0074479.1 MGP_WSBEiJ_G0029510.1 mouse_genomes_project 5 147704945 147765631 + MGP_WSBEiJ_P0074479 Cyth3 protein_coding protein_coding MGP_WSBEiJ_T0014439.1 MGP_WSBEiJ_G0012569.1 mouse_genomes_project 5 15564680 15565140 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069568.1 MGP_WSBEiJ_G0028595.1 mouse_genomes_project 5 28797345 28801825 + MGP_WSBEiJ_P0069568 Atraid protein_coding protein_coding MGP_WSBEiJ_T0069569.1 MGP_WSBEiJ_G0028595.1 mouse_genomes_project 5 28797354 28803638 + Atraid protein_coding retained_intron MGP_WSBEiJ_T0069570.1 MGP_WSBEiJ_G0028595.1 mouse_genomes_project 5 28797668 28803644 + MGP_WSBEiJ_P0069570 Atraid protein_coding protein_coding MGP_WSBEiJ_T0069571.1 MGP_WSBEiJ_G0028595.1 mouse_genomes_project 5 28797678 28803642 + MGP_WSBEiJ_P0069571 Atraid protein_coding protein_coding MGP_WSBEiJ_T0069572.1 MGP_WSBEiJ_G0028595.1 mouse_genomes_project 5 28797681 28803014 + MGP_WSBEiJ_P0069572 Atraid protein_coding protein_coding MGP_WSBEiJ_T0069573.1 MGP_WSBEiJ_G0028595.1 mouse_genomes_project 5 28797692 28803639 + MGP_WSBEiJ_P0069573 Atraid protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069574.1 MGP_WSBEiJ_G0028595.1 mouse_genomes_project 5 28797755 28803365 + MGP_WSBEiJ_P0069574 Atraid protein_coding protein_coding MGP_WSBEiJ_T0069575.1 MGP_WSBEiJ_G0028595.1 mouse_genomes_project 5 28802890 28803644 + Atraid protein_coding processed_transcript MGP_WSBEiJ_T0001672.1 MGP_WSBEiJ_G0001594.1 mouse_genomes_project 5 92323845 92324807 - TEC TEC MGP_WSBEiJ_T0069755.1 MGP_WSBEiJ_G0028620.1 mouse_genomes_project 5 29422055 29439464 - Rbks protein_coding processed_transcript MGP_WSBEiJ_T0069756.1 MGP_WSBEiJ_G0028620.1 mouse_genomes_project 5 29422055 29497612 - MGP_WSBEiJ_P0069756 Rbks protein_coding protein_coding MGP_WSBEiJ_T0069759.1 MGP_WSBEiJ_G0028620.1 mouse_genomes_project 5 29458968 29486092 - Rbks protein_coding processed_transcript MGP_WSBEiJ_T0069901.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31764384 31847779 + MGP_WSBEiJ_P0069901 protein_coding protein_coding MGP_WSBEiJ_T0069902.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31764403 31821327 + MGP_WSBEiJ_P0069902 protein_coding protein_coding MGP_WSBEiJ_T0069903.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31764488 31790674 + MGP_WSBEiJ_P0069903 protein_coding protein_coding MGP_WSBEiJ_T0069904.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31787603 31847779 + MGP_WSBEiJ_P0069904 protein_coding protein_coding MGP_WSBEiJ_T0069905.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31787603 31847788 + MGP_WSBEiJ_P0069905 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069906.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31787603 31826102 + MGP_WSBEiJ_P0069906 protein_coding protein_coding MGP_WSBEiJ_T0069907.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31787603 31847788 + MGP_WSBEiJ_P0069907 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069908.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31787632 31845525 + MGP_WSBEiJ_P0069908 protein_coding protein_coding MGP_WSBEiJ_T0069909.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31787687 31845308 + MGP_WSBEiJ_P0069909 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069910.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31808827 31826110 + MGP_WSBEiJ_P0069910 protein_coding protein_coding MGP_WSBEiJ_T0069911.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31827037 31828905 + protein_coding retained_intron MGP_WSBEiJ_T0069912.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31827971 31845239 + MGP_WSBEiJ_P0069912 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069913.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31835307 31841490 + protein_coding retained_intron MGP_WSBEiJ_T0069914.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31835321 31837509 + protein_coding retained_intron MGP_WSBEiJ_T0069915.1 MGP_WSBEiJ_G0028643.1 mouse_genomes_project 5 31841720 31844908 + protein_coding retained_intron MGP_WSBEiJ_T0008257.1 MGP_WSBEiJ_G0006707.1 mouse_genomes_project 5 130036825 130037230 - Gm43476 lincRNA lincRNA MGP_WSBEiJ_T0072603.1 MGP_WSBEiJ_G0029168.1 mouse_genomes_project 5 119434886 119591312 + Ksr2 protein_coding retained_intron MGP_WSBEiJ_T0072604.1 MGP_WSBEiJ_G0029168.1 mouse_genomes_project 5 119434886 119820148 + MGP_WSBEiJ_P0072604 Ksr2 protein_coding protein_coding MGP_WSBEiJ_T0072605.1 MGP_WSBEiJ_G0029168.1 mouse_genomes_project 5 119435716 119814644 + MGP_WSBEiJ_P0072605 Ksr2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0074100.1 MGP_WSBEiJ_G0029432.1 mouse_genomes_project 5 141750888 141754463 + MGP_WSBEiJ_P0074100 Cops6 protein_coding protein_coding MGP_WSBEiJ_T0074101.1 MGP_WSBEiJ_G0029432.1 mouse_genomes_project 5 141750917 141753795 + MGP_WSBEiJ_P0074101 Cops6 protein_coding protein_coding MGP_WSBEiJ_T0074102.1 MGP_WSBEiJ_G0029432.1 mouse_genomes_project 5 141750926 141752201 + Cops6 protein_coding retained_intron MGP_WSBEiJ_T0074103.1 MGP_WSBEiJ_G0029432.1 mouse_genomes_project 5 141750986 141753956 + Cops6 protein_coding retained_intron MGP_WSBEiJ_T0074104.1 MGP_WSBEiJ_G0029432.1 mouse_genomes_project 5 141752593 141753736 + MGP_WSBEiJ_P0074104 Cops6 protein_coding protein_coding MGP_WSBEiJ_T0001751.1 MGP_WSBEiJ_G0001673.1 mouse_genomes_project 5 120822130 120824823 + TEC TEC MGP_WSBEiJ_T0001721.1 MGP_WSBEiJ_G0001643.1 mouse_genomes_project 5 114226607 114227908 + TEC TEC MGP_WSBEiJ_T0069041.1 MGP_WSBEiJ_G0028492.1 mouse_genomes_project 5 13733596 13754908 + Hgf protein_coding retained_intron MGP_WSBEiJ_T0069042.1 MGP_WSBEiJ_G0028492.1 mouse_genomes_project 5 13733651 13804944 + MGP_WSBEiJ_P0069042 Hgf protein_coding protein_coding MGP_WSBEiJ_T0069043.1 MGP_WSBEiJ_G0028492.1 mouse_genomes_project 5 13733680 13750464 + Hgf protein_coding retained_intron MGP_WSBEiJ_T0069044.1 MGP_WSBEiJ_G0028492.1 mouse_genomes_project 5 13733855 13751037 + Hgf protein_coding retained_intron MGP_WSBEiJ_T0069045.1 MGP_WSBEiJ_G0028492.1 mouse_genomes_project 5 13733890 13804173 + MGP_WSBEiJ_P0069045 Hgf protein_coding protein_coding MGP_WSBEiJ_T0069046.1 MGP_WSBEiJ_G0028492.1 mouse_genomes_project 5 13734032 13803877 + MGP_WSBEiJ_P0069046 Hgf protein_coding protein_coding MGP_WSBEiJ_T0008299.1 MGP_WSBEiJ_G0006738.1 mouse_genomes_project 5 147442531 147446296 - Gm42504 lincRNA lincRNA MGP_WSBEiJ_T0001785.1 MGP_WSBEiJ_G0001706.1 mouse_genomes_project 5 127279559 127280930 + TEC TEC MGP_WSBEiJ_T0071421.1 MGP_WSBEiJ_G0028934.1 mouse_genomes_project 5 92646797 92666968 - MGP_WSBEiJ_P0071421 Naaa protein_coding protein_coding MGP_WSBEiJ_T0071422.1 MGP_WSBEiJ_G0028934.1 mouse_genomes_project 5 92646802 92651728 - Naaa protein_coding retained_intron MGP_WSBEiJ_T0071423.1 MGP_WSBEiJ_G0028934.1 mouse_genomes_project 5 92647406 92666963 - MGP_WSBEiJ_P0071423 Naaa protein_coding protein_coding MGP_WSBEiJ_T0071424.1 MGP_WSBEiJ_G0028934.1 mouse_genomes_project 5 92648529 92661502 - MGP_WSBEiJ_P0071424 Naaa protein_coding protein_coding MGP_WSBEiJ_T0071425.1 MGP_WSBEiJ_G0028934.1 mouse_genomes_project 5 92664614 92666963 - Naaa protein_coding retained_intron MGP_WSBEiJ_T0010557.1 MGP_WSBEiJ_G0008714.1 mouse_genomes_project 5 141092026 141092141 - Mir6418 miRNA miRNA MGP_WSBEiJ_T0014696.1 MGP_WSBEiJ_G0012826.1 mouse_genomes_project 5 119361529 119361966 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008201.1 MGP_WSBEiJ_G0006672.1 mouse_genomes_project 5 121002840 121006630 - lincRNA lincRNA MGP_WSBEiJ_T0071198.1 MGP_WSBEiJ_G0028864.1 mouse_genomes_project 5 86892651 86910562 - MGP_WSBEiJ_P0071198 Ugt2b34 protein_coding protein_coding MGP_WSBEiJ_T0071199.1 MGP_WSBEiJ_G0028864.1 mouse_genomes_project 5 86892651 86910562 - MGP_WSBEiJ_P0071199 Ugt2b34 protein_coding protein_coding MGP_WSBEiJ_T0074393.1 MGP_WSBEiJ_G0029493.1 mouse_genomes_project 5 146713862 146783769 - MGP_WSBEiJ_P0074393 protein_coding protein_coding MGP_WSBEiJ_T0074394.1 MGP_WSBEiJ_G0029493.1 mouse_genomes_project 5 146721301 146725893 - protein_coding processed_transcript MGP_WSBEiJ_T0074395.1 MGP_WSBEiJ_G0029493.1 mouse_genomes_project 5 146722156 146726436 - protein_coding retained_intron MGP_WSBEiJ_T0074396.1 MGP_WSBEiJ_G0029493.1 mouse_genomes_project 5 146747155 146812948 - MGP_WSBEiJ_P0074396 protein_coding protein_coding MGP_WSBEiJ_T0074397.1 MGP_WSBEiJ_G0029493.1 mouse_genomes_project 5 146756520 146758228 - protein_coding retained_intron MGP_WSBEiJ_T0074398.1 MGP_WSBEiJ_G0029493.1 mouse_genomes_project 5 146783554 146795729 - protein_coding processed_transcript MGP_WSBEiJ_T0074399.1 MGP_WSBEiJ_G0029493.1 mouse_genomes_project 5 146788305 146812666 - MGP_WSBEiJ_P0074399 protein_coding protein_coding MGP_WSBEiJ_T0001778.1 MGP_WSBEiJ_G0001700.1 mouse_genomes_project 5 126367499 126368838 - TEC TEC MGP_WSBEiJ_T0001418.1 MGP_WSBEiJ_G0001346.1 mouse_genomes_project 5 11656377 11659664 + TEC TEC MGP_WSBEiJ_T0004746.1 MGP_WSBEiJ_G0004088.1 mouse_genomes_project 5 125910277 125928553 - Gm15857 antisense antisense MGP_WSBEiJ_T0069313.1 MGP_WSBEiJ_G0028543.1 mouse_genomes_project 5 22288216 22308594 - MGP_WSBEiJ_P0069313 Wdr86 protein_coding protein_coding MGP_WSBEiJ_T0069314.1 MGP_WSBEiJ_G0028543.1 mouse_genomes_project 5 22288743 22308547 - Wdr86 protein_coding retained_intron MGP_WSBEiJ_T0069315.1 MGP_WSBEiJ_G0028543.1 mouse_genomes_project 5 22288747 22289856 - Wdr86 protein_coding retained_intron MGP_WSBEiJ_T0069316.1 MGP_WSBEiJ_G0028543.1 mouse_genomes_project 5 22289116 22292060 - MGP_WSBEiJ_P0069316 Wdr86 protein_coding protein_coding MGP_WSBEiJ_T0074447.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147356564 147370402 - MGP_WSBEiJ_P0074447 Zdhhc4 protein_coding protein_coding MGP_WSBEiJ_T0074448.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147356565 147370366 - MGP_WSBEiJ_P0074448 Zdhhc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074449.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147356572 147366438 - MGP_WSBEiJ_P0074449 Zdhhc4 protein_coding protein_coding MGP_WSBEiJ_T0074450.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147360455 147370357 - Zdhhc4 protein_coding processed_transcript MGP_WSBEiJ_T0074451.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147360510 147370369 - MGP_WSBEiJ_P0074451 Zdhhc4 protein_coding protein_coding MGP_WSBEiJ_T0074452.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147360516 147370360 - MGP_WSBEiJ_P0074452 Zdhhc4 protein_coding protein_coding MGP_WSBEiJ_T0074453.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147364216 147370375 - MGP_WSBEiJ_P0074453 Zdhhc4 protein_coding protein_coding MGP_WSBEiJ_T0074454.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147364303 147370375 - Zdhhc4 protein_coding processed_transcript MGP_WSBEiJ_T0074455.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147364318 147370374 - MGP_WSBEiJ_P0074455 Zdhhc4 protein_coding protein_coding MGP_WSBEiJ_T0074456.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147364416 147369715 - Zdhhc4 protein_coding retained_intron MGP_WSBEiJ_T0074457.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147366076 147370335 - Zdhhc4 protein_coding processed_transcript MGP_WSBEiJ_T0074458.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147366139 147370338 - Zdhhc4 protein_coding processed_transcript MGP_WSBEiJ_T0074459.1 MGP_WSBEiJ_G0029504.1 mouse_genomes_project 5 147369440 147370348 - Zdhhc4 protein_coding processed_transcript MGP_WSBEiJ_T0070799.1 MGP_WSBEiJ_G0028790.1 mouse_genomes_project 5 68774544 68798002 - MGP_WSBEiJ_P0070799 Yipf7 protein_coding protein_coding MGP_WSBEiJ_T0070800.1 MGP_WSBEiJ_G0028790.1 mouse_genomes_project 5 68777183 68797943 - MGP_WSBEiJ_P0070800 Yipf7 protein_coding protein_coding MGP_WSBEiJ_T0073131.1 MGP_WSBEiJ_G0029261.1 mouse_genomes_project 5 126633716 126672549 + MGP_WSBEiJ_P0073131 Ccdc62 protein_coding protein_coding MGP_WSBEiJ_T0073132.1 MGP_WSBEiJ_G0029261.1 mouse_genomes_project 5 126633726 126639630 + Ccdc62 protein_coding retained_intron MGP_WSBEiJ_T0073133.1 MGP_WSBEiJ_G0029261.1 mouse_genomes_project 5 126633726 126672549 + MGP_WSBEiJ_P0073133 Ccdc62 protein_coding protein_coding MGP_WSBEiJ_T0073134.1 MGP_WSBEiJ_G0029261.1 mouse_genomes_project 5 126646428 126654569 + Ccdc62 protein_coding processed_transcript MGP_WSBEiJ_T0073135.1 MGP_WSBEiJ_G0029261.1 mouse_genomes_project 5 126654546 126657651 + Ccdc62 protein_coding retained_intron MGP_WSBEiJ_T0073136.1 MGP_WSBEiJ_G0029261.1 mouse_genomes_project 5 126663732 126669774 + Ccdc62 protein_coding retained_intron MGP_WSBEiJ_T0004550.1 MGP_WSBEiJ_G0003940.1 mouse_genomes_project 5 429856 431119 + 2510017J16Rik antisense antisense MGP_WSBEiJ_T0074182.1 MGP_WSBEiJ_G0029447.1 mouse_genomes_project 5 142317433 142339250 + MGP_WSBEiJ_P0074182 A430033K04Rik protein_coding protein_coding MGP_WSBEiJ_T0074183.1 MGP_WSBEiJ_G0029447.1 mouse_genomes_project 5 142317450 142350907 + MGP_WSBEiJ_P0074183 A430033K04Rik protein_coding protein_coding MGP_WSBEiJ_T0074184.1 MGP_WSBEiJ_G0029447.1 mouse_genomes_project 5 142317468 142347294 + MGP_WSBEiJ_P0074184 A430033K04Rik protein_coding protein_coding MGP_WSBEiJ_T0011626.1 MGP_WSBEiJ_G0009766.1 mouse_genomes_project 5 71470505 71499475 + MGP_WSBEiJ_P0011626 Atp10d polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0011627.1 MGP_WSBEiJ_G0009766.1 mouse_genomes_project 5 71470505 71571961 + MGP_WSBEiJ_P0011627 Atp10d polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011628.1 MGP_WSBEiJ_G0009766.1 mouse_genomes_project 5 71470529 71498613 + Atp10d polymorphic_pseudogene retained_intron MGP_WSBEiJ_T0011629.1 MGP_WSBEiJ_G0009766.1 mouse_genomes_project 5 71536052 71571961 + Atp10d polymorphic_pseudogene processed_transcript MGP_WSBEiJ_T0011630.1 MGP_WSBEiJ_G0009766.1 mouse_genomes_project 5 71550597 71571948 + Atp10d polymorphic_pseudogene processed_transcript MGP_WSBEiJ_T0011631.1 MGP_WSBEiJ_G0009766.1 mouse_genomes_project 5 71550597 71571947 + MGP_WSBEiJ_P0011631 Atp10d polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0001825.1 MGP_WSBEiJ_G0001746.1 mouse_genomes_project 5 135585591 135588454 - TEC TEC MGP_WSBEiJ_T0007965.1 MGP_WSBEiJ_G0006503.1 mouse_genomes_project 5 33373822 33383147 - E130018O15Rik lincRNA lincRNA MGP_WSBEiJ_T0073591.1 MGP_WSBEiJ_G0029334.1 mouse_genomes_project 5 137790597 137858562 - MGP_WSBEiJ_P0073591 Clip2 protein_coding protein_coding MGP_WSBEiJ_T0073592.1 MGP_WSBEiJ_G0029334.1 mouse_genomes_project 5 137790601 137858562 - MGP_WSBEiJ_P0073592 Clip2 protein_coding protein_coding MGP_WSBEiJ_T0073593.1 MGP_WSBEiJ_G0029334.1 mouse_genomes_project 5 137817350 137819816 - Clip2 protein_coding retained_intron MGP_WSBEiJ_T0014572.1 MGP_WSBEiJ_G0012702.1 mouse_genomes_project 5 63285084 63285702 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074813.1 MGP_WSBEiJ_G0029581.1 mouse_genomes_project 5 154242458 154336671 + MGP_WSBEiJ_P0074813 B3glct protein_coding protein_coding MGP_WSBEiJ_T0074814.1 MGP_WSBEiJ_G0029581.1 mouse_genomes_project 5 154312576 154325127 + B3glct protein_coding processed_transcript MGP_WSBEiJ_T0074815.1 MGP_WSBEiJ_G0029581.1 mouse_genomes_project 5 154327951 154334681 + B3glct protein_coding retained_intron MGP_WSBEiJ_T0071467.1 MGP_WSBEiJ_G0028940.1 mouse_genomes_project 5 92852195 92918930 - MGP_WSBEiJ_P0071467 Scarb2 protein_coding protein_coding MGP_WSBEiJ_T0071468.1 MGP_WSBEiJ_G0028940.1 mouse_genomes_project 5 92918071 92920127 - Scarb2 protein_coding retained_intron MGP_WSBEiJ_T0072311.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116023658 116110706 + MGP_WSBEiJ_P0072311 Myo1h protein_coding protein_coding MGP_WSBEiJ_T0072312.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116055858 116112047 + MGP_WSBEiJ_P0072312 Myo1h protein_coding protein_coding MGP_WSBEiJ_T0072313.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116055858 116110561 + MGP_WSBEiJ_P0072313 Myo1h protein_coding protein_coding MGP_WSBEiJ_T0072314.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116104253 116112047 + Myo1h protein_coding retained_intron MGP_WSBEiJ_T0072315.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116104301 116110791 + Myo1h protein_coding retained_intron MGP_WSBEiJ_T0072316.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116104301 116110791 + MGP_WSBEiJ_P0072316 Myo1h protein_coding protein_coding MGP_WSBEiJ_T0072317.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116104301 116110791 + MGP_WSBEiJ_P0072317 Myo1h protein_coding protein_coding MGP_WSBEiJ_T0072318.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116104301 116110791 + MGP_WSBEiJ_P0072318 Myo1h protein_coding protein_coding MGP_WSBEiJ_T0072319.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116104844 116107174 + Myo1h protein_coding retained_intron MGP_WSBEiJ_T0072320.1 MGP_WSBEiJ_G0029115.1 mouse_genomes_project 5 116110885 116112828 + Myo1h protein_coding processed_transcript MGP_WSBEiJ_T0069599.1 MGP_WSBEiJ_G0028599.1 mouse_genomes_project 5 28867885 28891481 + MGP_WSBEiJ_P0069599 Trim54 protein_coding protein_coding MGP_WSBEiJ_T0069600.1 MGP_WSBEiJ_G0028599.1 mouse_genomes_project 5 28867907 28891483 + MGP_WSBEiJ_P0069600 Trim54 protein_coding protein_coding MGP_WSBEiJ_T0074460.1 MGP_WSBEiJ_G0029505.1 mouse_genomes_project 5 147402566 147440312 + MGP_WSBEiJ_P0074460 Grid2ip protein_coding protein_coding MGP_WSBEiJ_T0074461.1 MGP_WSBEiJ_G0029505.1 mouse_genomes_project 5 147409046 147440642 + MGP_WSBEiJ_P0074461 Grid2ip protein_coding protein_coding MGP_WSBEiJ_T0074462.1 MGP_WSBEiJ_G0029505.1 mouse_genomes_project 5 147415541 147440996 + MGP_WSBEiJ_P0074462 Grid2ip protein_coding protein_coding MGP_WSBEiJ_T0074463.1 MGP_WSBEiJ_G0029505.1 mouse_genomes_project 5 147418423 147421183 + Grid2ip protein_coding retained_intron MGP_WSBEiJ_T0074464.1 MGP_WSBEiJ_G0029505.1 mouse_genomes_project 5 147420910 147425723 + Grid2ip protein_coding retained_intron MGP_WSBEiJ_T0073811.1 MGP_WSBEiJ_G0029377.1 mouse_genomes_project 5 139575649 139581906 + MGP_WSBEiJ_P0073811 Polr2j protein_coding protein_coding MGP_WSBEiJ_T0073812.1 MGP_WSBEiJ_G0029377.1 mouse_genomes_project 5 139575649 139581682 + MGP_WSBEiJ_P0073812 Polr2j protein_coding protein_coding MGP_WSBEiJ_T0073813.1 MGP_WSBEiJ_G0029377.1 mouse_genomes_project 5 139575720 139581895 + MGP_WSBEiJ_P0073813 Polr2j protein_coding protein_coding MGP_WSBEiJ_T0069194.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21287262 21289561 + MGP_WSBEiJ_P0069194 Rint1 protein_coding protein_coding MGP_WSBEiJ_T0069195.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21287262 21323410 + MGP_WSBEiJ_P0069195 Rint1 protein_coding protein_coding MGP_WSBEiJ_T0069196.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21287263 21293425 + MGP_WSBEiJ_P0069196 Rint1 protein_coding protein_coding MGP_WSBEiJ_T0069197.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21287266 21323338 + MGP_WSBEiJ_P0069197 Rint1 protein_coding protein_coding MGP_WSBEiJ_T0069198.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21287270 21323409 + Rint1 protein_coding retained_intron MGP_WSBEiJ_T0069199.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21287272 21289586 + Rint1 protein_coding retained_intron MGP_WSBEiJ_T0069200.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21287286 21297719 + MGP_WSBEiJ_P0069200 Rint1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0069201.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21287292 21297711 + Rint1 protein_coding processed_transcript MGP_WSBEiJ_T0069202.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21306694 21310018 + Rint1 protein_coding retained_intron MGP_WSBEiJ_T0069203.1 MGP_WSBEiJ_G0028521.1 mouse_genomes_project 5 21311613 21318960 + Rint1 protein_coding processed_transcript MGP_WSBEiJ_T0004589.1 MGP_WSBEiJ_G0003974.1 mouse_genomes_project 5 33586068 33593584 - 4931431C16Rik antisense antisense MGP_WSBEiJ_T0001540.1 MGP_WSBEiJ_G0001464.1 mouse_genomes_project 5 47877021 47880127 - TEC TEC MGP_WSBEiJ_T0008278.1 MGP_WSBEiJ_G0006721.1 mouse_genomes_project 5 140442522 140462580 + 4933404O12Rik lincRNA lincRNA MGP_WSBEiJ_T0008279.1 MGP_WSBEiJ_G0006721.1 mouse_genomes_project 5 140442557 140459228 + 4933404O12Rik lincRNA lincRNA MGP_WSBEiJ_T0008280.1 MGP_WSBEiJ_G0006721.1 mouse_genomes_project 5 140442728 140459147 + 4933404O12Rik lincRNA lincRNA MGP_WSBEiJ_T0008281.1 MGP_WSBEiJ_G0006721.1 mouse_genomes_project 5 140442777 140462586 + 4933404O12Rik lincRNA lincRNA MGP_WSBEiJ_T0001663.1 MGP_WSBEiJ_G0001585.1 mouse_genomes_project 5 81031561 81035002 + TEC TEC MGP_WSBEiJ_T0098364.1 MGP_WSBEiJ_G0037027.1 mouse_genomes_project 5 92701104 92701223 + Gm23031 snRNA snRNA MGP_WSBEiJ_T0071270.1 MGP_WSBEiJ_G0028887.1 mouse_genomes_project 5 88132827 88139001 + MGP_WSBEiJ_P0071270 Smr3a protein_coding protein_coding MGP_WSBEiJ_T0071271.1 MGP_WSBEiJ_G0028887.1 mouse_genomes_project 5 88132831 88139004 + MGP_WSBEiJ_P0071271 Smr3a protein_coding protein_coding MGP_WSBEiJ_T0069412.1 MGP_WSBEiJ_G0028566.1 mouse_genomes_project 5 27274109 27383147 + MGP_WSBEiJ_P0069412 Ube3c protein_coding protein_coding MGP_WSBEiJ_T0069413.1 MGP_WSBEiJ_G0028566.1 mouse_genomes_project 5 27274313 27339212 + MGP_WSBEiJ_P0069413 Ube3c protein_coding protein_coding MGP_WSBEiJ_T0069414.1 MGP_WSBEiJ_G0028566.1 mouse_genomes_project 5 27274353 27306092 + Ube3c protein_coding retained_intron MGP_WSBEiJ_T0069415.1 MGP_WSBEiJ_G0028566.1 mouse_genomes_project 5 27295536 27306629 + Ube3c protein_coding processed_transcript MGP_WSBEiJ_T0069416.1 MGP_WSBEiJ_G0028566.1 mouse_genomes_project 5 27337639 27339212 + Ube3c protein_coding retained_intron MGP_WSBEiJ_T0069801.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736660 30762554 + MGP_WSBEiJ_P0069801 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069802.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736665 30772034 + MGP_WSBEiJ_P0069802 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069803.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736672 30740956 + MGP_WSBEiJ_P0069803 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069804.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736680 30837215 + MGP_WSBEiJ_P0069804 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069805.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736686 30874831 + MGP_WSBEiJ_P0069805 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069806.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736693 30874829 + MGP_WSBEiJ_P0069806 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069807.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736719 30782851 + Depdc5 protein_coding retained_intron MGP_WSBEiJ_T0069808.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736729 30763173 + Depdc5 protein_coding retained_intron MGP_WSBEiJ_T0069809.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736729 30801503 + MGP_WSBEiJ_P0069809 Depdc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069810.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736731 30754128 + MGP_WSBEiJ_P0069810 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069811.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30736736 30837213 + Depdc5 protein_coding processed_transcript MGP_WSBEiJ_T0069812.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30737114 30740968 + MGP_WSBEiJ_P0069812 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069813.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30737546 30872263 + MGP_WSBEiJ_P0069813 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069814.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30780367 30796053 + MGP_WSBEiJ_P0069814 Depdc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069815.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30801528 30872256 + MGP_WSBEiJ_P0069815 Depdc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069816.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30801626 30872263 + MGP_WSBEiJ_P0069816 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069817.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30822522 30823736 + Depdc5 protein_coding retained_intron MGP_WSBEiJ_T0069818.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30822817 30845615 + MGP_WSBEiJ_P0069818 Depdc5 protein_coding protein_coding MGP_WSBEiJ_T0069819.1 MGP_WSBEiJ_G0028628.1 mouse_genomes_project 5 30848610 30854837 + Depdc5 protein_coding retained_intron MGP_WSBEiJ_T0071740.1 MGP_WSBEiJ_G0028996.1 mouse_genomes_project 5 104954951 104965284 - MGP_WSBEiJ_P0071740 Gm17660 protein_coding protein_coding MGP_WSBEiJ_T0071741.1 MGP_WSBEiJ_G0028996.1 mouse_genomes_project 5 104954977 104965268 - MGP_WSBEiJ_P0071741 Gm17660 protein_coding protein_coding MGP_WSBEiJ_T0071742.1 MGP_WSBEiJ_G0028996.1 mouse_genomes_project 5 104956135 104965284 - MGP_WSBEiJ_P0071742 Gm17660 protein_coding protein_coding MGP_WSBEiJ_T0098347.1 MGP_WSBEiJ_G0037010.1 mouse_genomes_project 5 68999009 68999135 - Gm26044 snRNA snRNA MGP_WSBEiJ_T0071094.1 MGP_WSBEiJ_G0028842.1 mouse_genomes_project 5 76658690 76669374 - MGP_WSBEiJ_P0071094 Hopx protein_coding protein_coding MGP_WSBEiJ_T0071095.1 MGP_WSBEiJ_G0028842.1 mouse_genomes_project 5 76658690 76689241 - MGP_WSBEiJ_P0071095 Hopx protein_coding protein_coding MGP_WSBEiJ_T0071096.1 MGP_WSBEiJ_G0028842.1 mouse_genomes_project 5 76658690 76669350 - MGP_WSBEiJ_P0071096 Hopx protein_coding protein_coding MGP_WSBEiJ_T0001523.1 MGP_WSBEiJ_G0001448.1 mouse_genomes_project 5 47265698 47269449 - TEC TEC MGP_WSBEiJ_T0001524.1 MGP_WSBEiJ_G0001448.1 mouse_genomes_project 5 47268569 47268943 - TEC pseudogene MGP_WSBEiJ_T0070378.1 MGP_WSBEiJ_G0028721.1 mouse_genomes_project 5 43689892 43700305 + MGP_WSBEiJ_P0070378 Clrn2 protein_coding protein_coding MGP_WSBEiJ_T0004730.1 MGP_WSBEiJ_G0004074.1 mouse_genomes_project 5 122327905 122346077 - Gm10390 antisense antisense MGP_WSBEiJ_T0004731.1 MGP_WSBEiJ_G0004074.1 mouse_genomes_project 5 122338300 122346079 - Gm10390 antisense antisense MGP_WSBEiJ_T0004594.1 MGP_WSBEiJ_G0003979.1 mouse_genomes_project 5 36401511 36405076 - Gm26560 antisense antisense MGP_WSBEiJ_T0074413.1 MGP_WSBEiJ_G0029496.1 mouse_genomes_project 5 146979095 146993599 + MGP_WSBEiJ_P0074413 Fscn1 protein_coding protein_coding MGP_WSBEiJ_T0074414.1 MGP_WSBEiJ_G0029496.1 mouse_genomes_project 5 146979128 146993597 + MGP_WSBEiJ_P0074414 Fscn1 protein_coding protein_coding MGP_WSBEiJ_T0074415.1 MGP_WSBEiJ_G0029496.1 mouse_genomes_project 5 146979595 146992584 + MGP_WSBEiJ_P0074415 Fscn1 protein_coding protein_coding MGP_WSBEiJ_T0074416.1 MGP_WSBEiJ_G0029496.1 mouse_genomes_project 5 146981711 146989364 + Fscn1 protein_coding processed_transcript MGP_WSBEiJ_T0074417.1 MGP_WSBEiJ_G0029496.1 mouse_genomes_project 5 146982008 146992367 + Fscn1 protein_coding processed_transcript MGP_WSBEiJ_T0074418.1 MGP_WSBEiJ_G0029496.1 mouse_genomes_project 5 146983276 146989486 + Fscn1 protein_coding processed_transcript MGP_WSBEiJ_T0074419.1 MGP_WSBEiJ_G0029496.1 mouse_genomes_project 5 146988896 146992403 + Fscn1 protein_coding retained_intron MGP_WSBEiJ_T0001653.1 MGP_WSBEiJ_G0001575.1 mouse_genomes_project 5 73665338 73665804 - TEC TEC MGP_WSBEiJ_T0001470.1 MGP_WSBEiJ_G0001395.1 mouse_genomes_project 5 33385343 33386583 - TEC TEC MGP_WSBEiJ_T0004705.1 MGP_WSBEiJ_G0004059.1 mouse_genomes_project 5 116559703 116560949 - 4930515G01Rik antisense antisense MGP_WSBEiJ_T0014656.1 MGP_WSBEiJ_G0012786.1 mouse_genomes_project 5 107400393 107400716 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098355.1 MGP_WSBEiJ_G0037018.1 mouse_genomes_project 5 79478237 79478386 - Gm23429 snRNA snRNA MGP_WSBEiJ_T0070652.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64708914 64810207 - MGP_WSBEiJ_P0070652 Pds5a protein_coding protein_coding MGP_WSBEiJ_T0070653.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64708916 64716983 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070654.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64710961 64725841 - MGP_WSBEiJ_P0070654 Pds5a protein_coding protein_coding MGP_WSBEiJ_T0070655.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64715402 64809894 - MGP_WSBEiJ_P0070655 Pds5a protein_coding unknown_likely_coding MGP_WSBEiJ_T0070656.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64720466 64809895 - MGP_WSBEiJ_P0070656 Pds5a protein_coding protein_coding MGP_WSBEiJ_T0070657.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64720622 64727789 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070658.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64728110 64757634 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070659.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64728125 64735942 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070660.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64729566 64736960 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070661.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64730033 64737391 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070662.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64745103 64746278 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070663.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64749473 64752318 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070664.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64753176 64810312 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070665.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64761298 64762449 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0070666.1 MGP_WSBEiJ_G0028770.1 mouse_genomes_project 5 64774673 64808904 - Pds5a protein_coding retained_intron MGP_WSBEiJ_T0014663.1 MGP_WSBEiJ_G0012793.1 mouse_genomes_project 5 109123743 109123970 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004603.1 MGP_WSBEiJ_G0003984.1 mouse_genomes_project 5 42313794 42315866 + Gm16401 antisense antisense MGP_WSBEiJ_T0004604.1 MGP_WSBEiJ_G0003984.1 mouse_genomes_project 5 42313794 42315868 + Gm16401 antisense antisense MGP_WSBEiJ_T0073702.1 MGP_WSBEiJ_G0029357.1 mouse_genomes_project 5 138735984 138753505 + MGP_WSBEiJ_P0073702 Trim50 protein_coding unknown_likely_coding MGP_WSBEiJ_T0073703.1 MGP_WSBEiJ_G0029357.1 mouse_genomes_project 5 138737451 138753856 + MGP_WSBEiJ_P0073703 Trim50 protein_coding protein_coding MGP_WSBEiJ_T0073433.1 MGP_WSBEiJ_G0029313.1 mouse_genomes_project 5 132967621 133014335 + MGP_WSBEiJ_P0073433 protein_coding protein_coding MGP_WSBEiJ_T0073434.1 MGP_WSBEiJ_G0029313.1 mouse_genomes_project 5 132968469 133006393 + MGP_WSBEiJ_P0073434 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010529.1 MGP_WSBEiJ_G0008686.1 mouse_genomes_project 5 104933156 104933217 + Mir5619 miRNA miRNA MGP_WSBEiJ_T0004698.1 MGP_WSBEiJ_G0004055.1 mouse_genomes_project 5 114384508 114392920 + 1700095B10Rik antisense antisense MGP_WSBEiJ_T0004699.1 MGP_WSBEiJ_G0004055.1 mouse_genomes_project 5 114384516 114386908 + 1700095B10Rik antisense antisense MGP_WSBEiJ_T0004700.1 MGP_WSBEiJ_G0004055.1 mouse_genomes_project 5 114384525 114392868 + 1700095B10Rik antisense antisense MGP_WSBEiJ_T0004701.1 MGP_WSBEiJ_G0004055.1 mouse_genomes_project 5 114384548 114387159 + 1700095B10Rik antisense antisense MGP_WSBEiJ_T0069163.1 MGP_WSBEiJ_G0028516.1 mouse_genomes_project 5 20130374 20712411 + MGP_WSBEiJ_P0069163 Lhfpl3 protein_coding protein_coding MGP_WSBEiJ_T0069165.1 MGP_WSBEiJ_G0028516.1 mouse_genomes_project 5 20527385 20712402 + MGP_WSBEiJ_P0069165 Lhfpl3 protein_coding protein_coding MGP_WSBEiJ_T0070165.1 MGP_WSBEiJ_G0028683.1 mouse_genomes_project 5 34830266 34834446 - MGP_WSBEiJ_P0070165 protein_coding protein_coding MGP_WSBEiJ_T0008064.1 MGP_WSBEiJ_G0006578.1 mouse_genomes_project 5 86768741 86786181 - Gm43057 lincRNA lincRNA MGP_WSBEiJ_T0014750.1 MGP_WSBEiJ_G0012880.1 mouse_genomes_project 5 149567321 149567907 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014577.1 MGP_WSBEiJ_G0012707.1 mouse_genomes_project 5 66680207 66680499 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0070477.1 MGP_WSBEiJ_G0028737.1 mouse_genomes_project 5 51155001 51184435 + MGP_WSBEiJ_P0070477 Pi4k2b protein_coding protein_coding MGP_WSBEiJ_T0070478.1 MGP_WSBEiJ_G0028737.1 mouse_genomes_project 5 51155033 51165595 + MGP_WSBEiJ_P0070478 Pi4k2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070479.1 MGP_WSBEiJ_G0028737.1 mouse_genomes_project 5 51155037 51184435 + MGP_WSBEiJ_P0070479 Pi4k2b protein_coding protein_coding MGP_WSBEiJ_T0070480.1 MGP_WSBEiJ_G0028737.1 mouse_genomes_project 5 51168685 51171567 + Pi4k2b protein_coding retained_intron MGP_WSBEiJ_T0017544.1 MGP_WSBEiJ_G0015016.1 mouse_genomes_project 5 42280570 42302940 - Gm42716 processed_transcript sense_intronic MGP_WSBEiJ_T0017545.1 MGP_WSBEiJ_G0015016.1 mouse_genomes_project 5 42297704 42302884 - Gm42716 processed_transcript sense_intronic MGP_WSBEiJ_T0017546.1 MGP_WSBEiJ_G0015016.1 mouse_genomes_project 5 42302435 42304207 - Gm42716 processed_transcript retained_intron MGP_WSBEiJ_T0071091.1 MGP_WSBEiJ_G0028841.1 mouse_genomes_project 5 76585047 76630127 + MGP_WSBEiJ_P0071091 Thegl protein_coding protein_coding MGP_WSBEiJ_T0071092.1 MGP_WSBEiJ_G0028841.1 mouse_genomes_project 5 76585047 76630134 + MGP_WSBEiJ_P0071092 Thegl protein_coding protein_coding MGP_WSBEiJ_T0071093.1 MGP_WSBEiJ_G0028841.1 mouse_genomes_project 5 76603951 76614394 + MGP_WSBEiJ_P0071093 Thegl protein_coding protein_coding MGP_WSBEiJ_T0004713.1 MGP_WSBEiJ_G0004064.1 mouse_genomes_project 5 117936497 117943081 + Gm14508 antisense antisense MGP_WSBEiJ_T0072274.1 MGP_WSBEiJ_G0029107.1 mouse_genomes_project 5 115636134 115699830 - MGP_WSBEiJ_P0072274 Ssh1 protein_coding protein_coding MGP_WSBEiJ_T0072275.1 MGP_WSBEiJ_G0029107.1 mouse_genomes_project 5 115638773 115699715 - MGP_WSBEiJ_P0072275 Ssh1 protein_coding protein_coding MGP_WSBEiJ_T0072276.1 MGP_WSBEiJ_G0029107.1 mouse_genomes_project 5 115641202 115695654 - MGP_WSBEiJ_P0072276 Ssh1 protein_coding protein_coding MGP_WSBEiJ_T0072277.1 MGP_WSBEiJ_G0029107.1 mouse_genomes_project 5 115660407 115699763 - MGP_WSBEiJ_P0072277 Ssh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072278.1 MGP_WSBEiJ_G0029107.1 mouse_genomes_project 5 115664660 115665816 - MGP_WSBEiJ_P0072278 Ssh1 protein_coding protein_coding MGP_WSBEiJ_T0072279.1 MGP_WSBEiJ_G0029107.1 mouse_genomes_project 5 115665663 115699703 - Ssh1 protein_coding retained_intron MGP_WSBEiJ_T0069185.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21227335 21283287 - MGP_WSBEiJ_P0069185 Pus7 protein_coding protein_coding MGP_WSBEiJ_T0069186.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21227336 21283129 - MGP_WSBEiJ_P0069186 Pus7 protein_coding protein_coding MGP_WSBEiJ_T0069187.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21227343 21276541 - MGP_WSBEiJ_P0069187 Pus7 protein_coding protein_coding MGP_WSBEiJ_T0069188.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21237240 21244851 - Pus7 protein_coding processed_transcript MGP_WSBEiJ_T0069189.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21238309 21259126 - MGP_WSBEiJ_P0069189 Pus7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069190.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21244113 21259163 - Pus7 protein_coding processed_transcript MGP_WSBEiJ_T0069191.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21245270 21251304 - Pus7 protein_coding processed_transcript MGP_WSBEiJ_T0069192.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21257037 21274745 - MGP_WSBEiJ_P0069192 Pus7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069193.1 MGP_WSBEiJ_G0028520.1 mouse_genomes_project 5 21269036 21271962 - Pus7 protein_coding retained_intron MGP_WSBEiJ_T0001705.1 MGP_WSBEiJ_G0001627.1 mouse_genomes_project 5 108213362 108216932 - TEC TEC MGP_WSBEiJ_T0001519.1 MGP_WSBEiJ_G0001444.1 mouse_genomes_project 5 47037874 47041711 - TEC TEC MGP_WSBEiJ_T0007996.1 MGP_WSBEiJ_G0006524.1 mouse_genomes_project 5 43248503 43660402 - lincRNA lincRNA MGP_WSBEiJ_T0007997.1 MGP_WSBEiJ_G0006524.1 mouse_genomes_project 5 43359312 43423500 - lincRNA lincRNA MGP_WSBEiJ_T0070559.1 MGP_WSBEiJ_G0028753.1 mouse_genomes_project 5 62923666 62992169 - MGP_WSBEiJ_P0070559 Rell1 protein_coding protein_coding MGP_WSBEiJ_T0070560.1 MGP_WSBEiJ_G0028753.1 mouse_genomes_project 5 62923835 62992095 - MGP_WSBEiJ_P0070560 Rell1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070561.1 MGP_WSBEiJ_G0028753.1 mouse_genomes_project 5 62942829 62950392 - Rell1 protein_coding processed_transcript MGP_WSBEiJ_T0070562.1 MGP_WSBEiJ_G0028753.1 mouse_genomes_project 5 62946717 62950253 - Rell1 protein_coding retained_intron MGP_WSBEiJ_T0070385.1 MGP_WSBEiJ_G0028723.1 mouse_genomes_project 5 43764420 43771751 + MGP_WSBEiJ_P0070385 Med28 protein_coding protein_coding MGP_WSBEiJ_T0070386.1 MGP_WSBEiJ_G0028723.1 mouse_genomes_project 5 43764451 43775427 + MGP_WSBEiJ_P0070386 Med28 protein_coding protein_coding MGP_WSBEiJ_T0070387.1 MGP_WSBEiJ_G0028723.1 mouse_genomes_project 5 43765132 43771758 + Med28 protein_coding processed_transcript MGP_WSBEiJ_T0070388.1 MGP_WSBEiJ_G0028723.1 mouse_genomes_project 5 43766248 43771331 + Med28 protein_coding retained_intron MGP_WSBEiJ_T0014505.1 MGP_WSBEiJ_G0012635.1 mouse_genomes_project 5 31719580 31719892 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008041.1 MGP_WSBEiJ_G0006560.1 mouse_genomes_project 5 74554759 74590908 + Gm19583 lincRNA lincRNA MGP_WSBEiJ_T0071724.1 MGP_WSBEiJ_G0028992.1 mouse_genomes_project 5 104735624 104760844 - MGP_WSBEiJ_P0071724 Klhl8 protein_coding protein_coding MGP_WSBEiJ_T0071725.1 MGP_WSBEiJ_G0028992.1 mouse_genomes_project 5 104735624 104760844 - MGP_WSBEiJ_P0071725 Klhl8 protein_coding protein_coding MGP_WSBEiJ_T0071726.1 MGP_WSBEiJ_G0028992.1 mouse_genomes_project 5 104735724 104787299 - MGP_WSBEiJ_P0071726 Klhl8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071727.1 MGP_WSBEiJ_G0028992.1 mouse_genomes_project 5 104735731 104760844 - MGP_WSBEiJ_P0071727 Klhl8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071728.1 MGP_WSBEiJ_G0028992.1 mouse_genomes_project 5 104743861 104747923 - Klhl8 protein_coding retained_intron MGP_WSBEiJ_T0010519.1 MGP_WSBEiJ_G0008676.1 mouse_genomes_project 5 75400628 75400729 + Gm25374 miRNA miRNA MGP_WSBEiJ_T0001420.1 MGP_WSBEiJ_G0001348.1 mouse_genomes_project 5 11700114 11704496 + TEC TEC MGP_WSBEiJ_T0004740.1 MGP_WSBEiJ_G0004083.1 mouse_genomes_project 5 124559107 124563473 + Gm3970 antisense antisense MGP_WSBEiJ_T0001517.1 MGP_WSBEiJ_G0001442.1 mouse_genomes_project 5 46657700 46659072 + TEC TEC MGP_WSBEiJ_T0008116.1 MGP_WSBEiJ_G0006618.1 mouse_genomes_project 5 106413427 106419096 + Gm26519 lincRNA lincRNA MGP_WSBEiJ_T0072471.1 MGP_WSBEiJ_G0029146.1 mouse_genomes_project 5 117205415 117207757 + MGP_WSBEiJ_P0072471 Triap1 protein_coding protein_coding MGP_WSBEiJ_T0098399.1 MGP_WSBEiJ_G0037062.1 mouse_genomes_project 5 156348287 156348394 - Gm24242 snRNA snRNA MGP_WSBEiJ_T0098398.1 MGP_WSBEiJ_G0037061.1 mouse_genomes_project 5 155341393 155341499 + Gm24630 snRNA snRNA MGP_WSBEiJ_T0014576.1 MGP_WSBEiJ_G0012706.1 mouse_genomes_project 5 66105751 66106262 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014733.1 MGP_WSBEiJ_G0012863.1 mouse_genomes_project 5 143768239 143769883 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011395.1 MGP_WSBEiJ_G0009552.1 mouse_genomes_project 5 65503843 65504166 - Gm23183 misc_RNA misc_RNA MGP_WSBEiJ_T0010500.1 MGP_WSBEiJ_G0008657.1 mouse_genomes_project 5 28387778 28387858 + Mir5625 miRNA miRNA MGP_WSBEiJ_T0097427.1 MGP_WSBEiJ_G0036100.1 mouse_genomes_project 5 137559545 137559961 - Gm43480 sense_intronic sense_intronic MGP_WSBEiJ_T0001688.1 MGP_WSBEiJ_G0001610.1 mouse_genomes_project 5 101553839 101556136 + TEC TEC MGP_WSBEiJ_T0004656.1 MGP_WSBEiJ_G0004028.1 mouse_genomes_project 5 97277451 97281280 - Gm42604 antisense antisense MGP_WSBEiJ_T0001769.1 MGP_WSBEiJ_G0001691.1 mouse_genomes_project 5 125059003 125063679 + TEC TEC MGP_WSBEiJ_T0073367.1 MGP_WSBEiJ_G0029301.1 mouse_genomes_project 5 132053208 132177169 + MGP_WSBEiJ_P0073367 Adgrd1 protein_coding protein_coding MGP_WSBEiJ_T0073368.1 MGP_WSBEiJ_G0029301.1 mouse_genomes_project 5 132053215 132056934 + Adgrd1 protein_coding retained_intron MGP_WSBEiJ_T0073369.1 MGP_WSBEiJ_G0029301.1 mouse_genomes_project 5 132053215 132176247 + MGP_WSBEiJ_P0073369 Adgrd1 protein_coding protein_coding MGP_WSBEiJ_T0070166.1 MGP_WSBEiJ_G0028684.1 mouse_genomes_project 5 34845372 34869047 - MGP_WSBEiJ_P0070166 Man2b2 protein_coding protein_coding MGP_WSBEiJ_T0070167.1 MGP_WSBEiJ_G0028684.1 mouse_genomes_project 5 34847255 34851357 - MGP_WSBEiJ_P0070167 Man2b2 protein_coding protein_coding MGP_WSBEiJ_T0070168.1 MGP_WSBEiJ_G0028684.1 mouse_genomes_project 5 34847261 34856078 - MGP_WSBEiJ_P0070168 Man2b2 protein_coding protein_coding MGP_WSBEiJ_T0069285.1 MGP_WSBEiJ_G0028536.1 mouse_genomes_project 5 22057883 22084058 - MGP_WSBEiJ_P0069285 Gbx1 protein_coding protein_coding MGP_WSBEiJ_T0007981.1 MGP_WSBEiJ_G0006511.1 mouse_genomes_project 5 37439692 37445802 + Gm43454 lincRNA lincRNA MGP_WSBEiJ_T0008130.1 MGP_WSBEiJ_G0006630.1 mouse_genomes_project 5 108799125 108804406 - 4930428O21Rik lincRNA lincRNA MGP_WSBEiJ_T0004551.1 MGP_WSBEiJ_G0003941.1 mouse_genomes_project 5 468882 469616 - Gm43825 antisense antisense MGP_WSBEiJ_T0004637.1 MGP_WSBEiJ_G0004012.1 mouse_genomes_project 5 74127825 74154370 + Gm15984 antisense antisense MGP_WSBEiJ_T0004638.1 MGP_WSBEiJ_G0004012.1 mouse_genomes_project 5 74128247 74138315 + Gm15984 antisense antisense MGP_WSBEiJ_T0007923.1 MGP_WSBEiJ_G0006478.1 mouse_genomes_project 5 19926907 19935964 + lincRNA lincRNA MGP_WSBEiJ_T0007924.1 MGP_WSBEiJ_G0006478.1 mouse_genomes_project 5 19926914 20195260 + lincRNA lincRNA MGP_WSBEiJ_T0007925.1 MGP_WSBEiJ_G0006478.1 mouse_genomes_project 5 19931720 19935157 + lincRNA lincRNA MGP_WSBEiJ_T0097075.1 MGP_WSBEiJ_G0035756.1 mouse_genomes_project 5 137709852 137709966 + n-R5s178 rRNA rRNA MGP_WSBEiJ_T0098378.1 MGP_WSBEiJ_G0037041.1 mouse_genomes_project 5 115625056 115625137 - Gm22056 snRNA snRNA MGP_WSBEiJ_T0099623.1 MGP_WSBEiJ_G0038286.1 mouse_genomes_project 5 132844668 132844799 + Snora15 snoRNA snoRNA MGP_WSBEiJ_T0004688.1 MGP_WSBEiJ_G0004045.1 mouse_genomes_project 5 109951708 109957113 + 1700047L14Rik antisense antisense MGP_WSBEiJ_T0001494.1 MGP_WSBEiJ_G0001419.1 mouse_genomes_project 5 42434651 42435466 + TEC TEC MGP_WSBEiJ_T0001533.1 MGP_WSBEiJ_G0001457.1 mouse_genomes_project 5 47417198 47417841 - TEC TEC MGP_WSBEiJ_T0071160.1 MGP_WSBEiJ_G0028852.1 mouse_genomes_project 5 85973580 86029686 - MGP_WSBEiJ_P0071160 Cenpc1 protein_coding protein_coding MGP_WSBEiJ_T0071161.1 MGP_WSBEiJ_G0028852.1 mouse_genomes_project 5 86007851 86029650 - Cenpc1 protein_coding retained_intron MGP_WSBEiJ_T0071162.1 MGP_WSBEiJ_G0028852.1 mouse_genomes_project 5 86020790 86029625 - Cenpc1 protein_coding retained_intron MGP_WSBEiJ_T0001545.1 MGP_WSBEiJ_G0001469.1 mouse_genomes_project 5 49848188 49849986 - TEC TEC MGP_WSBEiJ_T0004576.1 MGP_WSBEiJ_G0003962.1 mouse_genomes_project 5 28554720 28559346 - Gm15461 antisense antisense MGP_WSBEiJ_T0007994.1 MGP_WSBEiJ_G0006522.1 mouse_genomes_project 5 43107084 43119784 + Gm42750 lincRNA lincRNA MGP_WSBEiJ_T0096832.1 MGP_WSBEiJ_G0035513.1 mouse_genomes_project 5 139036747 139037129 - pseudogene pseudogene MGP_WSBEiJ_T0070523.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52321396 52358614 + MGP_WSBEiJ_P0070523 Tbc1d19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070524.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52321417 52419022 + MGP_WSBEiJ_P0070524 Tbc1d19 protein_coding protein_coding MGP_WSBEiJ_T0070525.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52321438 52349077 + Tbc1d19 protein_coding processed_transcript MGP_WSBEiJ_T0070526.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52321439 52343383 + Tbc1d19 protein_coding retained_intron MGP_WSBEiJ_T0070527.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52321444 52419020 + MGP_WSBEiJ_P0070527 Tbc1d19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070528.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52321469 52350616 + MGP_WSBEiJ_P0070528 Tbc1d19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070529.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52345213 52350558 + Tbc1d19 protein_coding retained_intron MGP_WSBEiJ_T0070530.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52349066 52362275 + Tbc1d19 protein_coding processed_transcript MGP_WSBEiJ_T0070531.1 MGP_WSBEiJ_G0028745.1 mouse_genomes_project 5 52406164 52418795 + Tbc1d19 protein_coding processed_transcript MGP_WSBEiJ_T0073013.1 MGP_WSBEiJ_G0029241.1 mouse_genomes_project 5 125715073 125745410 - MGP_WSBEiJ_P0073013 Rhof protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073014.1 MGP_WSBEiJ_G0029241.1 mouse_genomes_project 5 125715073 125745345 - MGP_WSBEiJ_P0073014 Rhof protein_coding protein_coding MGP_WSBEiJ_T0073015.1 MGP_WSBEiJ_G0029241.1 mouse_genomes_project 5 125723461 125745378 - Rhof protein_coding processed_transcript MGP_WSBEiJ_T0073016.1 MGP_WSBEiJ_G0029241.1 mouse_genomes_project 5 125730459 125745641 - MGP_WSBEiJ_P0073016 Rhof protein_coding protein_coding MGP_WSBEiJ_T0074359.1 MGP_WSBEiJ_G0029484.1 mouse_genomes_project 5 144756885 144891160 - MGP_WSBEiJ_P0074359 Card11 protein_coding protein_coding MGP_WSBEiJ_T0074360.1 MGP_WSBEiJ_G0029484.1 mouse_genomes_project 5 144756887 144766096 - Card11 protein_coding retained_intron MGP_WSBEiJ_T0074361.1 MGP_WSBEiJ_G0029484.1 mouse_genomes_project 5 144796642 144891049 - Card11 protein_coding retained_intron MGP_WSBEiJ_T0008282.1 MGP_WSBEiJ_G0006722.1 mouse_genomes_project 5 140703371 140725219 - lincRNA lincRNA MGP_WSBEiJ_T0001859.1 MGP_WSBEiJ_G0001779.1 mouse_genomes_project 5 148285756 148287549 + TEC TEC MGP_WSBEiJ_T0072125.1 MGP_WSBEiJ_G0029076.1 mouse_genomes_project 5 112310479 112311835 + MGP_WSBEiJ_P0072125 Chek2 protein_coding protein_coding MGP_WSBEiJ_T0072126.1 MGP_WSBEiJ_G0029076.1 mouse_genomes_project 5 112310483 112347382 + MGP_WSBEiJ_P0072126 Chek2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072127.1 MGP_WSBEiJ_G0029076.1 mouse_genomes_project 5 112310500 112347394 + MGP_WSBEiJ_P0072127 Chek2 protein_coding protein_coding MGP_WSBEiJ_T0072128.1 MGP_WSBEiJ_G0029076.1 mouse_genomes_project 5 112310729 112311841 + MGP_WSBEiJ_P0072128 Chek2 protein_coding protein_coding MGP_WSBEiJ_T0072129.1 MGP_WSBEiJ_G0029076.1 mouse_genomes_project 5 112311955 112322346 + Chek2 protein_coding retained_intron MGP_WSBEiJ_T0072418.1 MGP_WSBEiJ_G0029134.1 mouse_genomes_project 5 116829381 116924793 + MGP_WSBEiJ_P0072418 Sppl3 protein_coding protein_coding MGP_WSBEiJ_T0072419.1 MGP_WSBEiJ_G0029134.1 mouse_genomes_project 5 116829390 116881814 + Sppl3 protein_coding processed_transcript MGP_WSBEiJ_T0072420.1 MGP_WSBEiJ_G0029134.1 mouse_genomes_project 5 116829741 116908450 + MGP_WSBEiJ_P0072420 Sppl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072421.1 MGP_WSBEiJ_G0029134.1 mouse_genomes_project 5 116896042 116898548 + Sppl3 protein_coding retained_intron MGP_WSBEiJ_T0072422.1 MGP_WSBEiJ_G0029134.1 mouse_genomes_project 5 116920759 116924259 + Sppl3 protein_coding retained_intron MGP_WSBEiJ_T0072704.1 MGP_WSBEiJ_G0029191.1 mouse_genomes_project 5 122938466 122967918 - MGP_WSBEiJ_P0072704 Dtx1 protein_coding protein_coding MGP_WSBEiJ_T0072705.1 MGP_WSBEiJ_G0029191.1 mouse_genomes_project 5 122938467 122953689 - Dtx1 protein_coding retained_intron MGP_WSBEiJ_T0072706.1 MGP_WSBEiJ_G0029191.1 mouse_genomes_project 5 122938513 122940340 - Dtx1 protein_coding retained_intron MGP_WSBEiJ_T0072707.1 MGP_WSBEiJ_G0029191.1 mouse_genomes_project 5 122939467 122941176 - Dtx1 protein_coding retained_intron MGP_WSBEiJ_T0072708.1 MGP_WSBEiJ_G0029191.1 mouse_genomes_project 5 122939717 122941074 - Dtx1 protein_coding retained_intron MGP_WSBEiJ_T0072709.1 MGP_WSBEiJ_G0029191.1 mouse_genomes_project 5 122953006 122961876 - Dtx1 protein_coding processed_transcript MGP_WSBEiJ_T0099611.1 MGP_WSBEiJ_G0038274.1 mouse_genomes_project 5 100333091 100333222 + Gm25969 snoRNA snoRNA MGP_WSBEiJ_T0001498.1 MGP_WSBEiJ_G0001423.1 mouse_genomes_project 5 42741216 42741969 - TEC TEC MGP_WSBEiJ_T0072671.1 MGP_WSBEiJ_G0029183.1 mouse_genomes_project 5 122720067 122742978 - MGP_WSBEiJ_P0072671 Plbd2 protein_coding protein_coding MGP_WSBEiJ_T0072672.1 MGP_WSBEiJ_G0029183.1 mouse_genomes_project 5 122722035 122742954 - Plbd2 protein_coding retained_intron MGP_WSBEiJ_T0072673.1 MGP_WSBEiJ_G0029183.1 mouse_genomes_project 5 122724087 122742965 - Plbd2 protein_coding retained_intron MGP_WSBEiJ_T0072364.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116512330 116559450 - MGP_WSBEiJ_P0072364 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072365.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116512331 116559447 - MGP_WSBEiJ_P0072365 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072366.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116512334 116529820 - MGP_WSBEiJ_P0072366 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072367.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116512334 116559389 - MGP_WSBEiJ_P0072367 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072368.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116512334 116559447 - MGP_WSBEiJ_P0072368 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072369.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116514482 116559417 - MGP_WSBEiJ_P0072369 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072370.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116514777 116559450 - MGP_WSBEiJ_P0072370 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072371.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116518129 116519080 - Git2 protein_coding processed_transcript MGP_WSBEiJ_T0072372.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116518777 116534213 - MGP_WSBEiJ_P0072372 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072373.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116523083 116527294 - Git2 protein_coding retained_intron MGP_WSBEiJ_T0072374.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116533262 116559450 - Git2 protein_coding retained_intron MGP_WSBEiJ_T0072375.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116534150 116552467 - MGP_WSBEiJ_P0072375 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072376.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116540204 116547648 - Git2 protein_coding retained_intron MGP_WSBEiJ_T0072377.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116550307 116561483 - MGP_WSBEiJ_P0072377 Git2 protein_coding protein_coding MGP_WSBEiJ_T0072378.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116550411 116559450 - Git2 protein_coding processed_transcript MGP_WSBEiJ_T0072379.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116550498 116553104 - Git2 protein_coding processed_transcript MGP_WSBEiJ_T0072380.1 MGP_WSBEiJ_G0029124.1 mouse_genomes_project 5 116551618 116559422 - Git2 protein_coding retained_intron MGP_WSBEiJ_T0074721.1 MGP_WSBEiJ_G0029566.1 mouse_genomes_project 5 151965059 152139832 - MGP_WSBEiJ_P0074721 Flt1 protein_coding protein_coding MGP_WSBEiJ_T0074722.1 MGP_WSBEiJ_G0029566.1 mouse_genomes_project 5 152010667 152042145 - Flt1 protein_coding processed_transcript MGP_WSBEiJ_T0074723.1 MGP_WSBEiJ_G0029566.1 mouse_genomes_project 5 152022667 152023159 - Flt1 protein_coding processed_transcript MGP_WSBEiJ_T0074724.1 MGP_WSBEiJ_G0029566.1 mouse_genomes_project 5 152042885 152139809 - MGP_WSBEiJ_P0074724 Flt1 protein_coding protein_coding MGP_WSBEiJ_T0074725.1 MGP_WSBEiJ_G0029566.1 mouse_genomes_project 5 152052367 152054398 - Flt1 protein_coding retained_intron MGP_WSBEiJ_T0074726.1 MGP_WSBEiJ_G0029566.1 mouse_genomes_project 5 152061830 152139809 - Flt1 protein_coding processed_transcript MGP_WSBEiJ_T0008024.1 MGP_WSBEiJ_G0006547.1 mouse_genomes_project 5 63667410 63669092 + Gm42565 lincRNA lincRNA MGP_WSBEiJ_T0008043.1 MGP_WSBEiJ_G0006562.1 mouse_genomes_project 5 75199184 75207159 + Gm43101 lincRNA lincRNA MGP_WSBEiJ_T0008044.1 MGP_WSBEiJ_G0006562.1 mouse_genomes_project 5 75206048 75207160 + Gm43101 lincRNA lincRNA MGP_WSBEiJ_T0073654.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138416109 138422500 - MGP_WSBEiJ_P0073654 Wbscr22 protein_coding protein_coding MGP_WSBEiJ_T0073655.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138416109 138431135 - MGP_WSBEiJ_P0073655 Wbscr22 protein_coding protein_coding MGP_WSBEiJ_T0073656.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138416111 138431428 - MGP_WSBEiJ_P0073656 Wbscr22 protein_coding protein_coding MGP_WSBEiJ_T0073657.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138416111 138430547 - MGP_WSBEiJ_P0073657 Wbscr22 protein_coding protein_coding MGP_WSBEiJ_T0073658.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138416437 138430508 - MGP_WSBEiJ_P0073658 Wbscr22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073659.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138416439 138422300 - Wbscr22 protein_coding retained_intron MGP_WSBEiJ_T0073660.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138416485 138422592 - Wbscr22 protein_coding retained_intron MGP_WSBEiJ_T0073661.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138416765 138422486 - Wbscr22 protein_coding retained_intron MGP_WSBEiJ_T0073662.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138421621 138427965 - Wbscr22 protein_coding processed_transcript MGP_WSBEiJ_T0073663.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138422052 138430517 - Wbscr22 protein_coding retained_intron MGP_WSBEiJ_T0073664.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138422458 138427837 - Wbscr22 protein_coding retained_intron MGP_WSBEiJ_T0073665.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138425697 138430244 - MGP_WSBEiJ_P0073665 Wbscr22 protein_coding protein_coding MGP_WSBEiJ_T0073666.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138427756 138430559 - MGP_WSBEiJ_P0073666 Wbscr22 protein_coding protein_coding MGP_WSBEiJ_T0073667.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138430222 138430548 - Wbscr22 protein_coding processed_transcript MGP_WSBEiJ_T0073668.1 MGP_WSBEiJ_G0029348.1 mouse_genomes_project 5 138430625 138431118 - MGP_WSBEiJ_P0073668 Wbscr22 protein_coding protein_coding MGP_WSBEiJ_T0001839.1 MGP_WSBEiJ_G0001759.1 mouse_genomes_project 5 138368175 138371193 - TEC TEC MGP_WSBEiJ_T0097430.1 MGP_WSBEiJ_G0036103.1 mouse_genomes_project 5 147071814 147072396 - Gm43378 sense_intronic sense_intronic MGP_WSBEiJ_T0008327.1 MGP_WSBEiJ_G0006761.1 mouse_genomes_project 5 153666963 153676243 + Gm42788 lincRNA lincRNA MGP_WSBEiJ_T0008008.1 MGP_WSBEiJ_G0006535.1 mouse_genomes_project 5 57216988 57229575 - 4930459L07Rik lincRNA lincRNA MGP_WSBEiJ_T0074465.1 MGP_WSBEiJ_G0029506.1 mouse_genomes_project 5 147452677 147471446 + MGP_WSBEiJ_P0074465 Kdelr2 protein_coding protein_coding MGP_WSBEiJ_T0070305.1 MGP_WSBEiJ_G0028710.1 mouse_genomes_project 5 41418667 41475968 + MGP_WSBEiJ_P0070305 Cpeb2 protein_coding protein_coding MGP_WSBEiJ_T0070306.1 MGP_WSBEiJ_G0028710.1 mouse_genomes_project 5 41418925 41475967 + MGP_WSBEiJ_P0070306 Cpeb2 protein_coding protein_coding MGP_WSBEiJ_T0070307.1 MGP_WSBEiJ_G0028710.1 mouse_genomes_project 5 41419424 41423503 + Cpeb2 protein_coding retained_intron MGP_WSBEiJ_T0070308.1 MGP_WSBEiJ_G0028710.1 mouse_genomes_project 5 41419456 41475968 + MGP_WSBEiJ_P0070308 Cpeb2 protein_coding protein_coding MGP_WSBEiJ_T0070309.1 MGP_WSBEiJ_G0028710.1 mouse_genomes_project 5 41420621 41467074 + MGP_WSBEiJ_P0070309 Cpeb2 protein_coding protein_coding MGP_WSBEiJ_T0070310.1 MGP_WSBEiJ_G0028710.1 mouse_genomes_project 5 41420633 41421469 + Cpeb2 protein_coding processed_transcript MGP_WSBEiJ_T0070311.1 MGP_WSBEiJ_G0028710.1 mouse_genomes_project 5 41422898 41431648 + Cpeb2 protein_coding processed_transcript MGP_WSBEiJ_T0074017.1 MGP_WSBEiJ_G0029412.1 mouse_genomes_project 5 141187874 141205446 - MGP_WSBEiJ_P0074017 Fbxo24 protein_coding protein_coding MGP_WSBEiJ_T0074018.1 MGP_WSBEiJ_G0029412.1 mouse_genomes_project 5 141187874 141201648 - MGP_WSBEiJ_P0074018 Fbxo24 protein_coding protein_coding MGP_WSBEiJ_T0074019.1 MGP_WSBEiJ_G0029412.1 mouse_genomes_project 5 141187877 141205400 - MGP_WSBEiJ_P0074019 Fbxo24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072466.1 MGP_WSBEiJ_G0029144.1 mouse_genomes_project 5 117190029 117197266 + MGP_WSBEiJ_P0072466 Srsf9 protein_coding protein_coding MGP_WSBEiJ_T0072467.1 MGP_WSBEiJ_G0029144.1 mouse_genomes_project 5 117191839 117197195 + Srsf9 protein_coding processed_transcript MGP_WSBEiJ_T0072468.1 MGP_WSBEiJ_G0029144.1 mouse_genomes_project 5 117192825 117196836 + Srsf9 protein_coding processed_transcript MGP_WSBEiJ_T0072469.1 MGP_WSBEiJ_G0029144.1 mouse_genomes_project 5 117194763 117197195 + MGP_WSBEiJ_P0072469 Srsf9 protein_coding protein_coding MGP_WSBEiJ_T0071549.1 MGP_WSBEiJ_G0028958.1 mouse_genomes_project 5 98034884 98036764 - MGP_WSBEiJ_P0071549 Gk2 protein_coding protein_coding MGP_WSBEiJ_T0069457.1 MGP_WSBEiJ_G0028575.1 mouse_genomes_project 5 27968614 27981106 - MGP_WSBEiJ_P0069457 Adgrf3 protein_coding protein_coding MGP_WSBEiJ_T0069458.1 MGP_WSBEiJ_G0028575.1 mouse_genomes_project 5 27968618 27971594 - MGP_WSBEiJ_P0069458 Adgrf3 protein_coding protein_coding MGP_WSBEiJ_T0069459.1 MGP_WSBEiJ_G0028575.1 mouse_genomes_project 5 27977482 27979971 - Adgrf3 protein_coding processed_transcript MGP_WSBEiJ_T0010498.1 MGP_WSBEiJ_G0008655.1 mouse_genomes_project 5 27030477 27030544 - Gm23801 miRNA miRNA MGP_WSBEiJ_T0001483.1 MGP_WSBEiJ_G0001408.1 mouse_genomes_project 5 41433373 41434969 + TEC TEC MGP_WSBEiJ_T0070056.1 MGP_WSBEiJ_G0028663.1 mouse_genomes_project 5 33019967 33026883 + MGP_WSBEiJ_P0070056 Hgfac protein_coding protein_coding MGP_WSBEiJ_T0070057.1 MGP_WSBEiJ_G0028663.1 mouse_genomes_project 5 33020035 33026920 + Hgfac protein_coding retained_intron MGP_WSBEiJ_T0070058.1 MGP_WSBEiJ_G0028663.1 mouse_genomes_project 5 33020035 33022141 + MGP_WSBEiJ_P0070058 Hgfac protein_coding protein_coding MGP_WSBEiJ_T0070059.1 MGP_WSBEiJ_G0028663.1 mouse_genomes_project 5 33022065 33023905 + Hgfac protein_coding retained_intron MGP_WSBEiJ_T0070060.1 MGP_WSBEiJ_G0028663.1 mouse_genomes_project 5 33022807 33025422 + MGP_WSBEiJ_P0070060 Hgfac protein_coding protein_coding MGP_WSBEiJ_T0070061.1 MGP_WSBEiJ_G0028663.1 mouse_genomes_project 5 33023284 33024370 + Hgfac protein_coding retained_intron MGP_WSBEiJ_T0070062.1 MGP_WSBEiJ_G0028663.1 mouse_genomes_project 5 33025023 33026865 + Hgfac protein_coding retained_intron MGP_WSBEiJ_T0070777.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 66852583 67085346 - MGP_WSBEiJ_P0070777 Atp8a1 protein_coding protein_coding MGP_WSBEiJ_T0070778.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 66852583 67085282 - MGP_WSBEiJ_P0070778 Atp8a1 protein_coding protein_coding MGP_WSBEiJ_T0070779.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 66853600 67085343 - MGP_WSBEiJ_P0070779 Atp8a1 protein_coding protein_coding MGP_WSBEiJ_T0070780.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 66855016 67085207 - MGP_WSBEiJ_P0070780 Atp8a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070781.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 66857036 67085122 - MGP_WSBEiJ_P0070781 Atp8a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0070782.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 66857117 66895000 - Atp8a1 protein_coding processed_transcript MGP_WSBEiJ_T0070783.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 66918135 67011292 - Atp8a1 protein_coding retained_intron MGP_WSBEiJ_T0070784.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 67001171 67003654 - Atp8a1 protein_coding retained_intron MGP_WSBEiJ_T0070785.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 67010700 67053148 - Atp8a1 protein_coding processed_transcript MGP_WSBEiJ_T0070786.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 67015411 67085343 - MGP_WSBEiJ_P0070786 Atp8a1 protein_coding protein_coding MGP_WSBEiJ_T0070787.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 67015411 67085343 - MGP_WSBEiJ_P0070787 Atp8a1 protein_coding protein_coding MGP_WSBEiJ_T0070788.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 67023030 67085341 - Atp8a1 protein_coding retained_intron MGP_WSBEiJ_T0070789.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 67043308 67046668 - Atp8a1 protein_coding retained_intron MGP_WSBEiJ_T0070790.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 67050085 67053157 - Atp8a1 protein_coding retained_intron MGP_WSBEiJ_T0070791.1 MGP_WSBEiJ_G0028785.1 mouse_genomes_project 5 67050089 67053771 - MGP_WSBEiJ_P0070791 Atp8a1 protein_coding protein_coding MGP_WSBEiJ_T0071685.1 MGP_WSBEiJ_G0028986.1 mouse_genomes_project 5 103301682 103725537 + MGP_WSBEiJ_P0071685 Arhgap24 protein_coding protein_coding MGP_WSBEiJ_T0071686.1 MGP_WSBEiJ_G0028986.1 mouse_genomes_project 5 103301682 103725536 + MGP_WSBEiJ_P0071686 Arhgap24 protein_coding protein_coding MGP_WSBEiJ_T0071687.1 MGP_WSBEiJ_G0028986.1 mouse_genomes_project 5 103301821 103492983 + Arhgap24 protein_coding retained_intron MGP_WSBEiJ_T0071688.1 MGP_WSBEiJ_G0028986.1 mouse_genomes_project 5 103489199 103725537 + MGP_WSBEiJ_P0071688 Arhgap24 protein_coding protein_coding MGP_WSBEiJ_T0071689.1 MGP_WSBEiJ_G0028986.1 mouse_genomes_project 5 103546916 103725537 + MGP_WSBEiJ_P0071689 Arhgap24 protein_coding protein_coding MGP_WSBEiJ_T0071690.1 MGP_WSBEiJ_G0028986.1 mouse_genomes_project 5 103592767 103725538 + MGP_WSBEiJ_P0071690 Arhgap24 protein_coding protein_coding MGP_WSBEiJ_T0071691.1 MGP_WSBEiJ_G0028986.1 mouse_genomes_project 5 103634821 103702931 + Arhgap24 protein_coding processed_transcript MGP_WSBEiJ_T0071692.1 MGP_WSBEiJ_G0028986.1 mouse_genomes_project 5 103671567 103725537 + MGP_WSBEiJ_P0071692 Arhgap24 protein_coding protein_coding MGP_WSBEiJ_T0097065.1 MGP_WSBEiJ_G0035746.1 mouse_genomes_project 5 51907463 51907573 + Gm26486 rRNA rRNA MGP_WSBEiJ_T0014613.1 MGP_WSBEiJ_G0012743.1 mouse_genomes_project 5 87446260 87446941 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014705.1 MGP_WSBEiJ_G0012835.1 mouse_genomes_project 5 125468865 125476714 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001718.1 MGP_WSBEiJ_G0001640.1 mouse_genomes_project 5 112915848 112917970 + TEC TEC MGP_WSBEiJ_T0071542.1 MGP_WSBEiJ_G0028956.1 mouse_genomes_project 5 97649998 97680018 - MGP_WSBEiJ_P0071542 Paqr3 protein_coding protein_coding MGP_WSBEiJ_T0071543.1 MGP_WSBEiJ_G0028956.1 mouse_genomes_project 5 97654655 97679995 - MGP_WSBEiJ_P0071543 Paqr3 protein_coding protein_coding MGP_WSBEiJ_T0071544.1 MGP_WSBEiJ_G0028956.1 mouse_genomes_project 5 97664377 97666217 - Paqr3 protein_coding retained_intron MGP_WSBEiJ_T0071545.1 MGP_WSBEiJ_G0028956.1 mouse_genomes_project 5 97665969 97679865 - MGP_WSBEiJ_P0071545 Paqr3 protein_coding protein_coding MGP_WSBEiJ_T0071546.1 MGP_WSBEiJ_G0028956.1 mouse_genomes_project 5 97670577 97680018 - MGP_WSBEiJ_P0071546 Paqr3 protein_coding protein_coding MGP_WSBEiJ_T0071547.1 MGP_WSBEiJ_G0028956.1 mouse_genomes_project 5 97673015 97680006 - Paqr3 protein_coding retained_intron MGP_WSBEiJ_T0001403.1 MGP_WSBEiJ_G0001331.1 mouse_genomes_project 5 5629183 5632798 + TEC TEC MGP_WSBEiJ_T0072859.1 MGP_WSBEiJ_G0029219.1 mouse_genomes_project 5 124647897 124683023 - MGP_WSBEiJ_P0072859 Ccdc63 protein_coding protein_coding MGP_WSBEiJ_T0072860.1 MGP_WSBEiJ_G0029219.1 mouse_genomes_project 5 124647927 124651282 - Ccdc63 protein_coding retained_intron MGP_WSBEiJ_T0072861.1 MGP_WSBEiJ_G0029219.1 mouse_genomes_project 5 124647942 124679781 - MGP_WSBEiJ_P0072861 Ccdc63 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072862.1 MGP_WSBEiJ_G0029219.1 mouse_genomes_project 5 124665703 124673645 - MGP_WSBEiJ_P0072862 Ccdc63 protein_coding protein_coding MGP_WSBEiJ_T0072863.1 MGP_WSBEiJ_G0029219.1 mouse_genomes_project 5 124671539 124673645 - MGP_WSBEiJ_P0072863 Ccdc63 protein_coding protein_coding MGP_WSBEiJ_T0072864.1 MGP_WSBEiJ_G0029219.1 mouse_genomes_project 5 124679390 124683918 - Ccdc63 protein_coding retained_intron MGP_WSBEiJ_T0072865.1 MGP_WSBEiJ_G0029219.1 mouse_genomes_project 5 124681077 124685676 - Ccdc63 protein_coding retained_intron MGP_WSBEiJ_T0069059.1 MGP_WSBEiJ_G0028496.1 mouse_genomes_project 5 15486248 15576896 - MGP_WSBEiJ_P0069059 Gnai1 protein_coding protein_coding MGP_WSBEiJ_T0069867.1 MGP_WSBEiJ_G0028639.1 mouse_genomes_project 5 31569964 31574574 - MGP_WSBEiJ_P0069867 Tmem129 protein_coding protein_coding MGP_WSBEiJ_T0069868.1 MGP_WSBEiJ_G0028639.1 mouse_genomes_project 5 31569971 31574646 - Tmem129 protein_coding retained_intron MGP_WSBEiJ_T0069869.1 MGP_WSBEiJ_G0028639.1 mouse_genomes_project 5 31572304 31574603 - Tmem129 protein_coding retained_intron MGP_WSBEiJ_T0001546.1 MGP_WSBEiJ_G0001470.1 mouse_genomes_project 5 49856587 49858576 + TEC TEC MGP_WSBEiJ_T0073595.1 MGP_WSBEiJ_G0029336.1 mouse_genomes_project 5 137890439 137901757 + Rfc2 protein_coding processed_transcript MGP_WSBEiJ_T0073596.1 MGP_WSBEiJ_G0029336.1 mouse_genomes_project 5 137893257 137914086 + MGP_WSBEiJ_P0073596 Rfc2 protein_coding protein_coding MGP_WSBEiJ_T0073597.1 MGP_WSBEiJ_G0029336.1 mouse_genomes_project 5 137893324 137902194 + Rfc2 protein_coding retained_intron MGP_WSBEiJ_T0073598.1 MGP_WSBEiJ_G0029336.1 mouse_genomes_project 5 137902079 137908515 + MGP_WSBEiJ_P0073598 Rfc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073599.1 MGP_WSBEiJ_G0029336.1 mouse_genomes_project 5 137903265 137905872 + Rfc2 protein_coding retained_intron MGP_WSBEiJ_T0073600.1 MGP_WSBEiJ_G0029336.1 mouse_genomes_project 5 137904678 137908888 + Rfc2 protein_coding retained_intron MGP_WSBEiJ_T0072977.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125467502 125594102 - MGP_WSBEiJ_P0072977 Kdm2b protein_coding protein_coding MGP_WSBEiJ_T0072978.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125467505 125498016 - MGP_WSBEiJ_P0072978 Kdm2b protein_coding protein_coding MGP_WSBEiJ_T0072979.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125467516 125594299 - MGP_WSBEiJ_P0072979 Kdm2b protein_coding protein_coding MGP_WSBEiJ_T0072980.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125467518 125593536 - MGP_WSBEiJ_P0072980 Kdm2b protein_coding protein_coding MGP_WSBEiJ_T0072981.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125468353 125594787 - MGP_WSBEiJ_P0072981 Kdm2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072982.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125468854 125594816 - MGP_WSBEiJ_P0072982 Kdm2b protein_coding protein_coding MGP_WSBEiJ_T0072983.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125472640 125478259 - Kdm2b protein_coding retained_intron MGP_WSBEiJ_T0072984.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125477681 125485748 - MGP_WSBEiJ_P0072984 Kdm2b protein_coding protein_coding MGP_WSBEiJ_T0072985.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125477808 125479407 - Kdm2b protein_coding retained_intron MGP_WSBEiJ_T0072986.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125479389 125515337 - Kdm2b protein_coding processed_transcript MGP_WSBEiJ_T0072987.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125480601 125519693 - Kdm2b protein_coding processed_transcript MGP_WSBEiJ_T0072988.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125480611 125519108 - Kdm2b protein_coding retained_intron MGP_WSBEiJ_T0072989.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125485014 125594095 - Kdm2b protein_coding retained_intron MGP_WSBEiJ_T0072990.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125531406 125593539 - MGP_WSBEiJ_P0072990 Kdm2b protein_coding protein_coding MGP_WSBEiJ_T0072991.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125531509 125553599 - MGP_WSBEiJ_P0072991 Kdm2b protein_coding protein_coding MGP_WSBEiJ_T0072992.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125531592 125549071 - Kdm2b protein_coding processed_transcript MGP_WSBEiJ_T0072993.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125533790 125554210 - Kdm2b protein_coding processed_transcript MGP_WSBEiJ_T0072994.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125533810 125553083 - Kdm2b protein_coding processed_transcript MGP_WSBEiJ_T0072995.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125539552 125594102 - Kdm2b protein_coding retained_intron MGP_WSBEiJ_T0072996.1 MGP_WSBEiJ_G0029237.1 mouse_genomes_project 5 125548811 125589989 - Kdm2b protein_coding processed_transcript MGP_WSBEiJ_T0072280.1 MGP_WSBEiJ_G0029108.1 mouse_genomes_project 5 115711220 115738458 + MGP_WSBEiJ_P0072280 Dao protein_coding protein_coding MGP_WSBEiJ_T0072281.1 MGP_WSBEiJ_G0029108.1 mouse_genomes_project 5 115729336 115732246 + Dao protein_coding retained_intron MGP_WSBEiJ_T0074276.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143534925 143560787 - MGP_WSBEiJ_P0074276 Ints1 protein_coding protein_coding MGP_WSBEiJ_T0074277.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143534928 143538505 - Ints1 protein_coding retained_intron MGP_WSBEiJ_T0074278.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143534928 143560752 - MGP_WSBEiJ_P0074278 Ints1 protein_coding protein_coding MGP_WSBEiJ_T0074279.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143534929 143538625 - MGP_WSBEiJ_P0074279 Ints1 protein_coding protein_coding MGP_WSBEiJ_T0074280.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143545232 143546141 - Ints1 protein_coding retained_intron MGP_WSBEiJ_T0074281.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143550178 143553007 - Ints1 protein_coding retained_intron MGP_WSBEiJ_T0074282.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143552206 143560788 - Ints1 protein_coding retained_intron MGP_WSBEiJ_T0074283.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143552532 143553563 - Ints1 protein_coding retained_intron MGP_WSBEiJ_T0074284.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143554440 143556798 - Ints1 protein_coding retained_intron MGP_WSBEiJ_T0074285.1 MGP_WSBEiJ_G0029465.1 mouse_genomes_project 5 143557684 143560788 - MGP_WSBEiJ_P0074285 Ints1 protein_coding protein_coding MGP_WSBEiJ_T0071988.1 MGP_WSBEiJ_G0029050.1 mouse_genomes_project 5 109916436 109937376 - MGP_WSBEiJ_P0071988 protein_coding protein_coding MGP_WSBEiJ_T0071989.1 MGP_WSBEiJ_G0029050.1 mouse_genomes_project 5 109916517 109937339 - MGP_WSBEiJ_P0071989 protein_coding protein_coding MGP_WSBEiJ_T0071990.1 MGP_WSBEiJ_G0029050.1 mouse_genomes_project 5 109916955 109963186 - MGP_WSBEiJ_P0071990 protein_coding protein_coding MGP_WSBEiJ_T0071991.1 MGP_WSBEiJ_G0029050.1 mouse_genomes_project 5 109918788 109935869 - MGP_WSBEiJ_P0071991 protein_coding protein_coding MGP_WSBEiJ_T0074615.1 MGP_WSBEiJ_G0029539.1 mouse_genomes_project 5 149345930 149352680 - MGP_WSBEiJ_P0074615 Zkscan14 protein_coding protein_coding MGP_WSBEiJ_T0074616.1 MGP_WSBEiJ_G0029539.1 mouse_genomes_project 5 149346607 149352669 - MGP_WSBEiJ_P0074616 Zkscan14 protein_coding protein_coding MGP_WSBEiJ_T0074617.1 MGP_WSBEiJ_G0029539.1 mouse_genomes_project 5 149350437 149352680 - MGP_WSBEiJ_P0074617 Zkscan14 protein_coding protein_coding MGP_WSBEiJ_T0001856.1 MGP_WSBEiJ_G0001776.1 mouse_genomes_project 5 147446086 147448402 - TEC TEC MGP_WSBEiJ_T0001456.1 MGP_WSBEiJ_G0001382.1 mouse_genomes_project 5 29739880 29740575 + TEC TEC MGP_WSBEiJ_T0072015.1 MGP_WSBEiJ_G0029059.1 mouse_genomes_project 5 111514605 111535674 + MGP_WSBEiJ_P0072015 Zfp605 protein_coding protein_coding MGP_WSBEiJ_T0072016.1 MGP_WSBEiJ_G0029059.1 mouse_genomes_project 5 111514849 111533340 + Zfp605 protein_coding processed_transcript MGP_WSBEiJ_T0072017.1 MGP_WSBEiJ_G0029059.1 mouse_genomes_project 5 111514864 111533298 + MGP_WSBEiJ_P0072017 Zfp605 protein_coding protein_coding MGP_WSBEiJ_T0072018.1 MGP_WSBEiJ_G0029059.1 mouse_genomes_project 5 111516564 111534982 + MGP_WSBEiJ_P0072018 Zfp605 protein_coding protein_coding MGP_WSBEiJ_T0007972.1 MGP_WSBEiJ_G0006506.1 mouse_genomes_project 5 35885289 35886062 + Gm43763 lincRNA lincRNA MGP_WSBEiJ_T0072302.1 MGP_WSBEiJ_G0029113.1 mouse_genomes_project 5 115866126 115983537 + MGP_WSBEiJ_P0072302 Acacb protein_coding protein_coding MGP_WSBEiJ_T0072303.1 MGP_WSBEiJ_G0029113.1 mouse_genomes_project 5 115888653 115983531 + MGP_WSBEiJ_P0072303 Acacb protein_coding protein_coding MGP_WSBEiJ_T0072304.1 MGP_WSBEiJ_G0029113.1 mouse_genomes_project 5 115900079 115918846 + MGP_WSBEiJ_P0072304 Acacb protein_coding protein_coding MGP_WSBEiJ_T0072305.1 MGP_WSBEiJ_G0029113.1 mouse_genomes_project 5 115928201 115983535 + Acacb protein_coding retained_intron MGP_WSBEiJ_T0072306.1 MGP_WSBEiJ_G0029113.1 mouse_genomes_project 5 115981111 115981737 + Acacb protein_coding retained_intron MGP_WSBEiJ_T0000002.1 MGP_WSBEiJ_G0000002.1 mouse_genomes_project 5 18019004 18022780 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_WSBEiJ_T0000003.1 MGP_WSBEiJ_G0000002.1 mouse_genomes_project 5 18019004 18022777 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_WSBEiJ_T0008096.1 MGP_WSBEiJ_G0006606.1 mouse_genomes_project 5 100920103 100927424 + 2310034O05Rik lincRNA lincRNA MGP_WSBEiJ_T0008097.1 MGP_WSBEiJ_G0006606.1 mouse_genomes_project 5 100920119 100926116 + 2310034O05Rik lincRNA lincRNA MGP_WSBEiJ_T0071314.1 MGP_WSBEiJ_G0028905.1 mouse_genomes_project 5 89919668 90134489 - MGP_WSBEiJ_P0071314 Adamts3 protein_coding protein_coding MGP_WSBEiJ_T0071315.1 MGP_WSBEiJ_G0028905.1 mouse_genomes_project 5 89919668 90134489 - MGP_WSBEiJ_P0071315 Adamts3 protein_coding protein_coding MGP_WSBEiJ_T0071316.1 MGP_WSBEiJ_G0028905.1 mouse_genomes_project 5 90083662 90134888 - MGP_WSBEiJ_P0071316 Adamts3 protein_coding protein_coding MGP_WSBEiJ_T0071317.1 MGP_WSBEiJ_G0028905.1 mouse_genomes_project 5 90112986 90133701 - Adamts3 protein_coding processed_transcript MGP_WSBEiJ_T0098358.1 MGP_WSBEiJ_G0037021.1 mouse_genomes_project 5 82662213 82662310 + Gm24129 snRNA snRNA MGP_WSBEiJ_T0098368.1 MGP_WSBEiJ_G0037031.1 mouse_genomes_project 5 100620414 100620498 - Gm22838 snRNA snRNA MGP_WSBEiJ_T0007942.1 MGP_WSBEiJ_G0006489.1 mouse_genomes_project 5 24084572 24118459 - 4930584F24Rik lincRNA lincRNA MGP_WSBEiJ_T0007943.1 MGP_WSBEiJ_G0006489.1 mouse_genomes_project 5 24084574 24118484 - 4930584F24Rik lincRNA lincRNA MGP_WSBEiJ_T0007944.1 MGP_WSBEiJ_G0006489.1 mouse_genomes_project 5 24084576 24118448 - 4930584F24Rik lincRNA lincRNA MGP_WSBEiJ_T0007945.1 MGP_WSBEiJ_G0006489.1 mouse_genomes_project 5 24100103 24118459 - 4930584F24Rik lincRNA lincRNA MGP_WSBEiJ_T0001565.1 MGP_WSBEiJ_G0001489.1 mouse_genomes_project 5 56517937 56520115 + TEC TEC MGP_WSBEiJ_T0098357.1 MGP_WSBEiJ_G0037020.1 mouse_genomes_project 5 80646860 80646963 + Gm22974 snRNA snRNA MGP_WSBEiJ_T0070372.1 MGP_WSBEiJ_G0028720.1 mouse_genomes_project 5 43670066 43686248 - MGP_WSBEiJ_P0070372 Qdpr protein_coding protein_coding MGP_WSBEiJ_T0070373.1 MGP_WSBEiJ_G0028720.1 mouse_genomes_project 5 43670190 43679516 - Qdpr protein_coding retained_intron MGP_WSBEiJ_T0070374.1 MGP_WSBEiJ_G0028720.1 mouse_genomes_project 5 43670545 43680455 - Qdpr protein_coding processed_transcript MGP_WSBEiJ_T0070375.1 MGP_WSBEiJ_G0028720.1 mouse_genomes_project 5 43670618 43686174 - MGP_WSBEiJ_P0070375 Qdpr protein_coding protein_coding MGP_WSBEiJ_T0070376.1 MGP_WSBEiJ_G0028720.1 mouse_genomes_project 5 43675359 43686226 - MGP_WSBEiJ_P0070376 Qdpr protein_coding protein_coding MGP_WSBEiJ_T0070377.1 MGP_WSBEiJ_G0028720.1 mouse_genomes_project 5 43679424 43686210 - MGP_WSBEiJ_P0070377 Qdpr protein_coding protein_coding MGP_WSBEiJ_T0069720.1 MGP_WSBEiJ_G0028615.1 mouse_genomes_project 5 29271861 29274598 + 4930548H24Rik protein_coding retained_intron MGP_WSBEiJ_T0069721.1 MGP_WSBEiJ_G0028615.1 mouse_genomes_project 5 29271980 29274598 + MGP_WSBEiJ_P0069721 4930548H24Rik protein_coding protein_coding MGP_WSBEiJ_T0014573.1 MGP_WSBEiJ_G0012703.1 mouse_genomes_project 5 63352295 63352794 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004662.1 MGP_WSBEiJ_G0004030.1 mouse_genomes_project 5 100302259 100303486 + 4930405H06Rik antisense antisense MGP_WSBEiJ_T0074307.1 MGP_WSBEiJ_G0029473.1 mouse_genomes_project 5 144167730 144171334 - MGP_WSBEiJ_P0074307 Mrm2 protein_coding protein_coding MGP_WSBEiJ_T0072726.1 MGP_WSBEiJ_G0029198.1 mouse_genomes_project 5 123276175 123352674 - MGP_WSBEiJ_P0072726 Rph3a protein_coding unknown_likely_coding MGP_WSBEiJ_T0072727.1 MGP_WSBEiJ_G0029198.1 mouse_genomes_project 5 123276178 123352634 - MGP_WSBEiJ_P0072727 Rph3a protein_coding protein_coding MGP_WSBEiJ_T0072728.1 MGP_WSBEiJ_G0029198.1 mouse_genomes_project 5 123276178 123352092 - MGP_WSBEiJ_P0072728 Rph3a protein_coding protein_coding MGP_WSBEiJ_T0072729.1 MGP_WSBEiJ_G0029198.1 mouse_genomes_project 5 123277510 123351061 - MGP_WSBEiJ_P0072729 Rph3a protein_coding protein_coding MGP_WSBEiJ_T0072730.1 MGP_WSBEiJ_G0029198.1 mouse_genomes_project 5 123310534 123352646 - MGP_WSBEiJ_P0072730 Rph3a protein_coding protein_coding MGP_WSBEiJ_T0073841.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139724103 139840568 - MGP_WSBEiJ_P0073841 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073842.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139724103 140051205 - MGP_WSBEiJ_P0073842 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073843.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139724103 140051189 - MGP_WSBEiJ_P0073843 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073844.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139724478 140051219 - MGP_WSBEiJ_P0073844 Cux1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073845.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139726442 140051204 - MGP_WSBEiJ_P0073845 Cux1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073846.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139747093 140051386 - MGP_WSBEiJ_P0073846 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073847.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139749056 140051187 - MGP_WSBEiJ_P0073847 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073848.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139755146 140050282 - MGP_WSBEiJ_P0073848 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073849.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139755180 140049210 - MGP_WSBEiJ_P0073849 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073850.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139755187 139783213 - Cux1 protein_coding processed_transcript MGP_WSBEiJ_T0073851.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139755485 140051160 - MGP_WSBEiJ_P0073851 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073852.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139793983 139843872 - MGP_WSBEiJ_P0073852 Cux1 protein_coding protein_coding MGP_WSBEiJ_T0073853.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139842851 140051193 - Cux1 protein_coding retained_intron MGP_WSBEiJ_T0073854.1 MGP_WSBEiJ_G0029383.1 mouse_genomes_project 5 139963832 140051431 - Cux1 protein_coding retained_intron MGP_WSBEiJ_T0074211.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142928797 142979885 + MGP_WSBEiJ_P0074211 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074212.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142928831 142957107 + Sun1 protein_coding retained_intron MGP_WSBEiJ_T0074213.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142928831 142957108 + MGP_WSBEiJ_P0074213 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074214.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142928833 142952507 + MGP_WSBEiJ_P0074214 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074215.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142928835 142955366 + MGP_WSBEiJ_P0074215 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074216.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142928839 142944993 + Sun1 protein_coding retained_intron MGP_WSBEiJ_T0074217.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142928844 142978637 + MGP_WSBEiJ_P0074217 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074218.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142928849 142955372 + MGP_WSBEiJ_P0074218 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074219.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142941167 142941515 + Sun1 protein_coding processed_transcript MGP_WSBEiJ_T0074220.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142941199 142954165 + MGP_WSBEiJ_P0074220 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074221.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142941253 142978731 + MGP_WSBEiJ_P0074221 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074222.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142941493 142954129 + MGP_WSBEiJ_P0074222 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074223.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142952445 142959600 + Sun1 protein_coding processed_transcript MGP_WSBEiJ_T0074224.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142954043 142958707 + MGP_WSBEiJ_P0074224 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074225.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142955510 142964393 + MGP_WSBEiJ_P0074225 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074226.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142959871 142963311 + Sun1 protein_coding retained_intron MGP_WSBEiJ_T0074227.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142964344 142975455 + MGP_WSBEiJ_P0074227 Sun1 protein_coding protein_coding MGP_WSBEiJ_T0074228.1 MGP_WSBEiJ_G0029453.1 mouse_genomes_project 5 142970140 142978594 + MGP_WSBEiJ_P0074228 Sun1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069029.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13065512 13534973 + MGP_WSBEiJ_P0069029 Cacna2d1 protein_coding protein_coding MGP_WSBEiJ_T0069030.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13065609 13531533 + MGP_WSBEiJ_P0069030 Cacna2d1 protein_coding protein_coding MGP_WSBEiJ_T0069031.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13065609 13531515 + MGP_WSBEiJ_P0069031 Cacna2d1 protein_coding protein_coding MGP_WSBEiJ_T0069032.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13065609 13531533 + MGP_WSBEiJ_P0069032 Cacna2d1 protein_coding protein_coding MGP_WSBEiJ_T0069033.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13065609 13531533 + MGP_WSBEiJ_P0069033 Cacna2d1 protein_coding protein_coding MGP_WSBEiJ_T0069034.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13065609 13534966 + MGP_WSBEiJ_P0069034 Cacna2d1 protein_coding protein_coding MGP_WSBEiJ_T0069035.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13065650 13531191 + MGP_WSBEiJ_P0069035 Cacna2d1 protein_coding protein_coding MGP_WSBEiJ_T0069036.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13065732 13231541 + MGP_WSBEiJ_P0069036 Cacna2d1 protein_coding protein_coding MGP_WSBEiJ_T0069037.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13166851 13425186 + Cacna2d1 protein_coding retained_intron MGP_WSBEiJ_T0069038.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13480490 13483988 + Cacna2d1 protein_coding retained_intron MGP_WSBEiJ_T0069039.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13480637 13497049 + Cacna2d1 protein_coding retained_intron MGP_WSBEiJ_T0069040.1 MGP_WSBEiJ_G0028491.1 mouse_genomes_project 5 13521378 13522310 + Cacna2d1 protein_coding retained_intron MGP_WSBEiJ_T0014495.1 MGP_WSBEiJ_G0012625.1 mouse_genomes_project 5 30009173 30009756 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097404.1 MGP_WSBEiJ_G0036078.1 mouse_genomes_project 5 2081284 2086162 - Gm10484 sense_intronic sense_intronic MGP_WSBEiJ_T0099592.1 MGP_WSBEiJ_G0038255.1 mouse_genomes_project 5 57183896 57184030 + Gm22536 snoRNA snoRNA MGP_WSBEiJ_T0074070.1 MGP_WSBEiJ_G0029423.1 mouse_genomes_project 5 141415876 141423912 - Pilra protein_coding retained_intron MGP_WSBEiJ_T0074071.1 MGP_WSBEiJ_G0029423.1 mouse_genomes_project 5 141415952 141446771 - MGP_WSBEiJ_P0074071 Pilra protein_coding protein_coding MGP_WSBEiJ_T0074072.1 MGP_WSBEiJ_G0029423.1 mouse_genomes_project 5 141445774 141446713 - MGP_WSBEiJ_P0074072 Pilra protein_coding protein_coding MGP_WSBEiJ_T0097414.1 MGP_WSBEiJ_G0036088.1 mouse_genomes_project 5 72573717 72576205 - Gm17207 sense_intronic sense_intronic MGP_WSBEiJ_T0098352.1 MGP_WSBEiJ_G0037015.1 mouse_genomes_project 5 72321781 72321867 - Gm24776 snRNA snRNA MGP_WSBEiJ_T0007982.1 MGP_WSBEiJ_G0006512.1 mouse_genomes_project 5 37597891 37616168 + Gm42524 lincRNA lincRNA MGP_WSBEiJ_T0014523.1 MGP_WSBEiJ_G0012653.1 mouse_genomes_project 5 42568337 42570107 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097411.1 MGP_WSBEiJ_G0036085.1 mouse_genomes_project 5 42075746 42077021 + Gm16014 sense_intronic sense_intronic MGP_WSBEiJ_T0072674.1 MGP_WSBEiJ_G0029184.1 mouse_genomes_project 5 122751450 122776150 + MGP_WSBEiJ_P0072674 Slc8b1 protein_coding protein_coding MGP_WSBEiJ_T0072675.1 MGP_WSBEiJ_G0029184.1 mouse_genomes_project 5 122751517 122776145 + MGP_WSBEiJ_P0072675 Slc8b1 protein_coding protein_coding MGP_WSBEiJ_T0072676.1 MGP_WSBEiJ_G0029184.1 mouse_genomes_project 5 122751534 122776146 + MGP_WSBEiJ_P0072676 Slc8b1 protein_coding protein_coding MGP_WSBEiJ_T0072677.1 MGP_WSBEiJ_G0029184.1 mouse_genomes_project 5 122751552 122753471 + MGP_WSBEiJ_P0072677 Slc8b1 protein_coding protein_coding MGP_WSBEiJ_T0072678.1 MGP_WSBEiJ_G0029184.1 mouse_genomes_project 5 122753150 122760028 + MGP_WSBEiJ_P0072678 Slc8b1 protein_coding protein_coding MGP_WSBEiJ_T0072679.1 MGP_WSBEiJ_G0029184.1 mouse_genomes_project 5 122753425 122775183 + MGP_WSBEiJ_P0072679 Slc8b1 protein_coding protein_coding MGP_WSBEiJ_T0072680.1 MGP_WSBEiJ_G0029184.1 mouse_genomes_project 5 122761055 122762509 + Slc8b1 protein_coding retained_intron MGP_WSBEiJ_T0001589.1 MGP_WSBEiJ_G0001512.1 mouse_genomes_project 5 64491226 64491993 + TEC TEC MGP_WSBEiJ_T0071380.1 MGP_WSBEiJ_G0028924.1 mouse_genomes_project 5 91461843 91470685 + MGP_WSBEiJ_P0071380 Areg protein_coding protein_coding MGP_WSBEiJ_T0099596.1 MGP_WSBEiJ_G0038259.1 mouse_genomes_project 5 63037746 63037878 - Gm25608 snoRNA snoRNA MGP_WSBEiJ_T0072248.1 MGP_WSBEiJ_G0029103.1 mouse_genomes_project 5 115451548 115460130 + MGP_WSBEiJ_P0072248 Iscu protein_coding protein_coding MGP_WSBEiJ_T0072249.1 MGP_WSBEiJ_G0029103.1 mouse_genomes_project 5 115451603 115460130 + MGP_WSBEiJ_P0072249 Iscu protein_coding protein_coding MGP_WSBEiJ_T0072250.1 MGP_WSBEiJ_G0029103.1 mouse_genomes_project 5 115451603 115457621 + MGP_WSBEiJ_P0072250 Iscu protein_coding protein_coding MGP_WSBEiJ_T0072251.1 MGP_WSBEiJ_G0029103.1 mouse_genomes_project 5 115451618 115457202 + MGP_WSBEiJ_P0072251 Iscu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072252.1 MGP_WSBEiJ_G0029103.1 mouse_genomes_project 5 115451805 115459921 + MGP_WSBEiJ_P0072252 Iscu protein_coding protein_coding MGP_WSBEiJ_T0072253.1 MGP_WSBEiJ_G0029103.1 mouse_genomes_project 5 115451825 115459852 + MGP_WSBEiJ_P0072253 Iscu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072254.1 MGP_WSBEiJ_G0029103.1 mouse_genomes_project 5 115453974 115459748 + MGP_WSBEiJ_P0072254 Iscu protein_coding protein_coding MGP_WSBEiJ_T0097073.1 MGP_WSBEiJ_G0035754.1 mouse_genomes_project 5 122269160 122269269 + n-R5s176 rRNA rRNA MGP_WSBEiJ_T0014748.1 MGP_WSBEiJ_G0012878.1 mouse_genomes_project 5 149139720 149140152 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098353.1 MGP_WSBEiJ_G0037016.1 mouse_genomes_project 5 74827691 74827796 - Gm22084 snRNA snRNA MGP_WSBEiJ_T0008300.1 MGP_WSBEiJ_G0006739.1 mouse_genomes_project 5 147839512 147848655 + D130017N08Rik lincRNA lincRNA MGP_WSBEiJ_T0008301.1 MGP_WSBEiJ_G0006739.1 mouse_genomes_project 5 147841020 147849956 + D130017N08Rik lincRNA lincRNA MGP_WSBEiJ_T0008303.1 MGP_WSBEiJ_G0006739.1 mouse_genomes_project 5 147849136 147851400 + D130017N08Rik lincRNA lincRNA MGP_WSBEiJ_T0073648.1 MGP_WSBEiJ_G0029347.1 mouse_genomes_project 5 138386399 138414266 + MGP_WSBEiJ_P0073648 Stx1a protein_coding protein_coding MGP_WSBEiJ_T0073649.1 MGP_WSBEiJ_G0029347.1 mouse_genomes_project 5 138386424 138409272 + MGP_WSBEiJ_P0073649 Stx1a protein_coding protein_coding MGP_WSBEiJ_T0073650.1 MGP_WSBEiJ_G0029347.1 mouse_genomes_project 5 138386477 138414266 + MGP_WSBEiJ_P0073650 Stx1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073651.1 MGP_WSBEiJ_G0029347.1 mouse_genomes_project 5 138400155 138412278 + Stx1a protein_coding processed_transcript MGP_WSBEiJ_T0073652.1 MGP_WSBEiJ_G0029347.1 mouse_genomes_project 5 138403712 138414265 + Stx1a protein_coding retained_intron MGP_WSBEiJ_T0073653.1 MGP_WSBEiJ_G0029347.1 mouse_genomes_project 5 138403918 138412387 + Stx1a protein_coding processed_transcript MGP_WSBEiJ_T0014544.1 MGP_WSBEiJ_G0012674.1 mouse_genomes_project 5 54751811 54752124 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0068864.1 MGP_WSBEiJ_G0028466.1 mouse_genomes_project 5 2421679 2455322 - Cldn12 protein_coding processed_transcript MGP_WSBEiJ_T0068865.1 MGP_WSBEiJ_G0028466.1 mouse_genomes_project 5 2445451 2455199 - MGP_WSBEiJ_P0068865 Cldn12 protein_coding protein_coding MGP_WSBEiJ_T0068866.1 MGP_WSBEiJ_G0028466.1 mouse_genomes_project 5 2445545 2455283 - MGP_WSBEiJ_P0068866 Cldn12 protein_coding protein_coding MGP_WSBEiJ_T0068867.1 MGP_WSBEiJ_G0028466.1 mouse_genomes_project 5 2445547 2455235 - MGP_WSBEiJ_P0068867 Cldn12 protein_coding protein_coding MGP_WSBEiJ_T0068868.1 MGP_WSBEiJ_G0028466.1 mouse_genomes_project 5 2445659 2455140 - MGP_WSBEiJ_P0068868 Cldn12 protein_coding protein_coding MGP_WSBEiJ_T0068869.1 MGP_WSBEiJ_G0028466.1 mouse_genomes_project 5 2448844 2455199 - MGP_WSBEiJ_P0068869 Cldn12 protein_coding protein_coding MGP_WSBEiJ_T0068870.1 MGP_WSBEiJ_G0028466.1 mouse_genomes_project 5 2451499 2455368 - Cldn12 protein_coding processed_transcript MGP_WSBEiJ_T0068871.1 MGP_WSBEiJ_G0028466.1 mouse_genomes_project 5 2453627 2454856 - Cldn12 protein_coding processed_transcript MGP_WSBEiJ_T0008320.1 MGP_WSBEiJ_G0006756.1 mouse_genomes_project 5 153461574 153465591 + Gm15409 lincRNA lincRNA MGP_WSBEiJ_T0071278.1 MGP_WSBEiJ_G0028894.1 mouse_genomes_project 5 88669407 88682628 + MGP_WSBEiJ_P0071278 Ambn protein_coding protein_coding MGP_WSBEiJ_T0071279.1 MGP_WSBEiJ_G0028894.1 mouse_genomes_project 5 88669427 88682977 + MGP_WSBEiJ_P0071279 Ambn protein_coding protein_coding MGP_WSBEiJ_T0073227.1 MGP_WSBEiJ_G0029274.1 mouse_genomes_project 5 127242740 127279818 - MGP_WSBEiJ_P0073227 Rilpl1 protein_coding protein_coding MGP_WSBEiJ_T0073228.1 MGP_WSBEiJ_G0029274.1 mouse_genomes_project 5 127243197 127252991 - MGP_WSBEiJ_P0073228 Rilpl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073229.1 MGP_WSBEiJ_G0029274.1 mouse_genomes_project 5 127243312 127263675 - MGP_WSBEiJ_P0073229 Rilpl1 protein_coding protein_coding MGP_WSBEiJ_T0073230.1 MGP_WSBEiJ_G0029274.1 mouse_genomes_project 5 127243324 127263759 - MGP_WSBEiJ_P0073230 Rilpl1 protein_coding protein_coding MGP_WSBEiJ_T0073522.1 MGP_WSBEiJ_G0029330.1 mouse_genomes_project 5 137439714 137474624 + MGP_WSBEiJ_P0073522 Gtf2ird2 protein_coding protein_coding MGP_WSBEiJ_T0073523.1 MGP_WSBEiJ_G0029330.1 mouse_genomes_project 5 137439720 137480911 + MGP_WSBEiJ_P0073523 Gtf2ird2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073524.1 MGP_WSBEiJ_G0029330.1 mouse_genomes_project 5 137454337 137454965 + Gtf2ird2 protein_coding processed_transcript MGP_WSBEiJ_T0073525.1 MGP_WSBEiJ_G0029330.1 mouse_genomes_project 5 137463203 137472686 + Gtf2ird2 protein_coding retained_intron MGP_WSBEiJ_T0073526.1 MGP_WSBEiJ_G0029330.1 mouse_genomes_project 5 137470580 137473084 + MGP_WSBEiJ_P0073526 Gtf2ird2 protein_coding protein_coding MGP_WSBEiJ_T0100846.1 MGP_WSBEiJ_G0039304.1 mouse_genomes_project 5 271069 271246 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008204.1 MGP_WSBEiJ_G0006675.1 mouse_genomes_project 5 121255433 121262730 + 1700081H04Rik lincRNA lincRNA MGP_WSBEiJ_T0098320.1 MGP_WSBEiJ_G0036983.1 mouse_genomes_project 5 3378854 3378947 + Gm24686 snRNA snRNA MGP_WSBEiJ_T0008101.1 MGP_WSBEiJ_G0006608.1 mouse_genomes_project 5 101686172 101689927 - Gm36793 lincRNA lincRNA MGP_WSBEiJ_T0014706.1 MGP_WSBEiJ_G0012836.1 mouse_genomes_project 5 125671945 125672403 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011389.1 MGP_WSBEiJ_G0009546.1 mouse_genomes_project 5 20948813 20949143 - Gm25219 misc_RNA misc_RNA MGP_WSBEiJ_T0098323.1 MGP_WSBEiJ_G0036986.1 mouse_genomes_project 5 6750709 6750811 - Gm23312 snRNA snRNA MGP_WSBEiJ_T0008038.1 MGP_WSBEiJ_G0006557.1 mouse_genomes_project 5 74157286 74160249 - Gm15985 lincRNA lincRNA MGP_WSBEiJ_T0069274.1 MGP_WSBEiJ_G0028534.1 mouse_genomes_project 5 21990553 21992952 - MGP_WSBEiJ_P0069274 Tmub1 protein_coding protein_coding MGP_WSBEiJ_T0069275.1 MGP_WSBEiJ_G0028534.1 mouse_genomes_project 5 21990561 21992723 - MGP_WSBEiJ_P0069275 Tmub1 protein_coding protein_coding MGP_WSBEiJ_T0069276.1 MGP_WSBEiJ_G0028534.1 mouse_genomes_project 5 21990561 21992413 - MGP_WSBEiJ_P0069276 Tmub1 protein_coding protein_coding MGP_WSBEiJ_T0069277.1 MGP_WSBEiJ_G0028534.1 mouse_genomes_project 5 21991144 21992685 - MGP_WSBEiJ_P0069277 Tmub1 protein_coding protein_coding MGP_WSBEiJ_T0069278.1 MGP_WSBEiJ_G0028534.1 mouse_genomes_project 5 21991648 21992889 - MGP_WSBEiJ_P0069278 Tmub1 protein_coding protein_coding MGP_WSBEiJ_T0070459.1 MGP_WSBEiJ_G0028732.1 mouse_genomes_project 5 50530793 50571088 - MGP_WSBEiJ_P0070459 Dhx15 protein_coding protein_coding MGP_WSBEiJ_T0070460.1 MGP_WSBEiJ_G0028732.1 mouse_genomes_project 5 50531283 50570951 - MGP_WSBEiJ_P0070460 Dhx15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070461.1 MGP_WSBEiJ_G0028732.1 mouse_genomes_project 5 50533914 50538397 - Dhx15 protein_coding retained_intron MGP_WSBEiJ_T0070462.1 MGP_WSBEiJ_G0028732.1 mouse_genomes_project 5 50534316 50571063 - MGP_WSBEiJ_P0070462 Dhx15 protein_coding protein_coding MGP_WSBEiJ_T0070463.1 MGP_WSBEiJ_G0028732.1 mouse_genomes_project 5 50539259 50542229 - Dhx15 protein_coding retained_intron MGP_WSBEiJ_T0070464.1 MGP_WSBEiJ_G0028732.1 mouse_genomes_project 5 50547355 50571068 - MGP_WSBEiJ_P0070464 Dhx15 protein_coding protein_coding MGP_WSBEiJ_T0070465.1 MGP_WSBEiJ_G0028732.1 mouse_genomes_project 5 50565391 50567991 - Dhx15 protein_coding retained_intron MGP_WSBEiJ_T0100101.1 MGP_WSBEiJ_G0038705.1 mouse_genomes_project 5 44016665 44017544 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0073492.1 MGP_WSBEiJ_G0029326.1 mouse_genomes_project 5 133965602 134429684 - MGP_WSBEiJ_P0073492 Wbscr17 protein_coding protein_coding MGP_WSBEiJ_T0073493.1 MGP_WSBEiJ_G0029326.1 mouse_genomes_project 5 134066577 134429263 - MGP_WSBEiJ_P0073493 Wbscr17 protein_coding protein_coding MGP_WSBEiJ_T0073494.1 MGP_WSBEiJ_G0029326.1 mouse_genomes_project 5 134191552 134428102 - Wbscr17 protein_coding retained_intron MGP_WSBEiJ_T0073495.1 MGP_WSBEiJ_G0029326.1 mouse_genomes_project 5 134258067 134429060 - Wbscr17 protein_coding retained_intron MGP_WSBEiJ_T0073496.1 MGP_WSBEiJ_G0029326.1 mouse_genomes_project 5 134428036 134429265 - Wbscr17 protein_coding processed_transcript MGP_WSBEiJ_T0073000.1 MGP_WSBEiJ_G0029239.1 mouse_genomes_project 5 125638190 125652776 - MGP_WSBEiJ_P0073000 Morn3 protein_coding protein_coding MGP_WSBEiJ_T0073001.1 MGP_WSBEiJ_G0029239.1 mouse_genomes_project 5 125641897 125653017 - MGP_WSBEiJ_P0073001 Morn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073002.1 MGP_WSBEiJ_G0029239.1 mouse_genomes_project 5 125641917 125643904 - MGP_WSBEiJ_P0073002 Morn3 protein_coding protein_coding MGP_WSBEiJ_T0073003.1 MGP_WSBEiJ_G0029239.1 mouse_genomes_project 5 125641990 125643912 - MGP_WSBEiJ_P0073003 Morn3 protein_coding protein_coding MGP_WSBEiJ_T0073004.1 MGP_WSBEiJ_G0029239.1 mouse_genomes_project 5 125643503 125653006 - MGP_WSBEiJ_P0073004 Morn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070455.1 MGP_WSBEiJ_G0028731.1 mouse_genomes_project 5 49810409 49916055 - MGP_WSBEiJ_P0070455 Ppargc1a protein_coding protein_coding MGP_WSBEiJ_T0070456.1 MGP_WSBEiJ_G0028731.1 mouse_genomes_project 5 49813930 49916144 - MGP_WSBEiJ_P0070456 Ppargc1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070457.1 MGP_WSBEiJ_G0028731.1 mouse_genomes_project 5 49814457 49929936 - MGP_WSBEiJ_P0070457 Ppargc1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070458.1 MGP_WSBEiJ_G0028731.1 mouse_genomes_project 5 49852847 49929958 - MGP_WSBEiJ_P0070458 Ppargc1a protein_coding protein_coding MGP_WSBEiJ_T0074751.1 MGP_WSBEiJ_G0029571.1 mouse_genomes_project 5 152973077 153021116 - MGP_WSBEiJ_P0074751 Ubl3 protein_coding protein_coding MGP_WSBEiJ_T0074752.1 MGP_WSBEiJ_G0029571.1 mouse_genomes_project 5 152973571 153021243 - MGP_WSBEiJ_P0074752 Ubl3 protein_coding protein_coding MGP_WSBEiJ_T0074753.1 MGP_WSBEiJ_G0029571.1 mouse_genomes_project 5 152973584 153021243 - MGP_WSBEiJ_P0074753 Ubl3 protein_coding protein_coding MGP_WSBEiJ_T0074754.1 MGP_WSBEiJ_G0029571.1 mouse_genomes_project 5 152974420 153006050 - Ubl3 protein_coding processed_transcript MGP_WSBEiJ_T0074755.1 MGP_WSBEiJ_G0029571.1 mouse_genomes_project 5 152977709 153020119 - Ubl3 protein_coding processed_transcript MGP_WSBEiJ_T0074756.1 MGP_WSBEiJ_G0029571.1 mouse_genomes_project 5 152977719 153020111 - Ubl3 protein_coding processed_transcript MGP_WSBEiJ_T0074757.1 MGP_WSBEiJ_G0029571.1 mouse_genomes_project 5 153015041 153021152 - Ubl3 protein_coding retained_intron MGP_WSBEiJ_T0069112.1 MGP_WSBEiJ_G0028506.1 mouse_genomes_project 5 18841126 19015108 - MGP_WSBEiJ_P0069112 Fbxl13 protein_coding protein_coding MGP_WSBEiJ_T0069113.1 MGP_WSBEiJ_G0028506.1 mouse_genomes_project 5 18847477 19015090 - Fbxl13 protein_coding retained_intron MGP_WSBEiJ_T0069114.1 MGP_WSBEiJ_G0028506.1 mouse_genomes_project 5 18879306 19015060 - MGP_WSBEiJ_P0069114 Fbxl13 protein_coding protein_coding MGP_WSBEiJ_T0069117.1 MGP_WSBEiJ_G0028506.1 mouse_genomes_project 5 19013038 19015137 - Fbxl13 protein_coding retained_intron MGP_WSBEiJ_T0004605.1 MGP_WSBEiJ_G0003985.1 mouse_genomes_project 5 42429836 42434145 + Gm42982 antisense antisense MGP_WSBEiJ_T0068905.1 MGP_WSBEiJ_G0028471.1 mouse_genomes_project 5 3725427 4329097 - MGP_WSBEiJ_P0068905 Zfp804b protein_coding protein_coding MGP_WSBEiJ_T0068906.1 MGP_WSBEiJ_G0028471.1 mouse_genomes_project 5 3725447 3831709 - MGP_WSBEiJ_P0068906 Zfp804b protein_coding protein_coding MGP_WSBEiJ_T0073768.1 MGP_WSBEiJ_G0029370.1 mouse_genomes_project 5 139341867 139368010 - MGP_WSBEiJ_P0073768 Ywhag protein_coding protein_coding MGP_WSBEiJ_T0073769.1 MGP_WSBEiJ_G0029370.1 mouse_genomes_project 5 139341867 139367965 - MGP_WSBEiJ_P0073769 Ywhag protein_coding protein_coding MGP_WSBEiJ_T0073770.1 MGP_WSBEiJ_G0029370.1 mouse_genomes_project 5 139364092 139368008 - Ywhag protein_coding retained_intron MGP_WSBEiJ_T0073771.1 MGP_WSBEiJ_G0029370.1 mouse_genomes_project 5 139364097 139368027 - Ywhag protein_coding processed_transcript MGP_WSBEiJ_T0073772.1 MGP_WSBEiJ_G0029370.1 mouse_genomes_project 5 139364173 139367961 - Ywhag protein_coding processed_transcript MGP_WSBEiJ_T0001640.1 MGP_WSBEiJ_G0001563.1 mouse_genomes_project 5 72147424 72149548 - TEC TEC MGP_WSBEiJ_T0072460.1 MGP_WSBEiJ_G0029143.1 mouse_genomes_project 5 117159642 117163986 - MGP_WSBEiJ_P0072460 Dynll1 protein_coding protein_coding MGP_WSBEiJ_T0072461.1 MGP_WSBEiJ_G0029143.1 mouse_genomes_project 5 117160956 117163650 - Dynll1 protein_coding retained_intron MGP_WSBEiJ_T0072462.1 MGP_WSBEiJ_G0029143.1 mouse_genomes_project 5 117160965 117162422 - Dynll1 protein_coding processed_transcript MGP_WSBEiJ_T0072463.1 MGP_WSBEiJ_G0029143.1 mouse_genomes_project 5 117161039 117163899 - MGP_WSBEiJ_P0072463 Dynll1 protein_coding protein_coding MGP_WSBEiJ_T0072464.1 MGP_WSBEiJ_G0029143.1 mouse_genomes_project 5 117162542 117163866 - Dynll1 protein_coding processed_transcript MGP_WSBEiJ_T0072465.1 MGP_WSBEiJ_G0029143.1 mouse_genomes_project 5 117163260 117163921 - Dynll1 protein_coding retained_intron MGP_WSBEiJ_T0073044.1 MGP_WSBEiJ_G0029246.1 mouse_genomes_project 5 125965357 126000162 + Bcl7a protein_coding processed_transcript MGP_WSBEiJ_T0073045.1 MGP_WSBEiJ_G0029246.1 mouse_genomes_project 5 125965971 126001065 + MGP_WSBEiJ_P0073045 Bcl7a protein_coding protein_coding MGP_WSBEiJ_T0073046.1 MGP_WSBEiJ_G0029246.1 mouse_genomes_project 5 125966023 125986633 + MGP_WSBEiJ_P0073046 Bcl7a protein_coding protein_coding MGP_WSBEiJ_T0072550.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117940710 117951433 - MGP_WSBEiJ_P0072550 Prkab1 protein_coding protein_coding MGP_WSBEiJ_T0072551.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117940714 117951479 - MGP_WSBEiJ_P0072551 Prkab1 protein_coding protein_coding MGP_WSBEiJ_T0072552.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117941291 117942286 - Prkab1 protein_coding retained_intron MGP_WSBEiJ_T0072553.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117941440 117945182 - Prkab1 protein_coding retained_intron MGP_WSBEiJ_T0072554.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117941559 117951327 - MGP_WSBEiJ_P0072554 Prkab1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072555.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117941774 117951422 - MGP_WSBEiJ_P0072555 Prkab1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072556.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117944785 117951368 - Prkab1 protein_coding retained_intron MGP_WSBEiJ_T0072557.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117946677 117948617 - Prkab1 protein_coding retained_intron MGP_WSBEiJ_T0072558.1 MGP_WSBEiJ_G0029157.1 mouse_genomes_project 5 117950869 117951430 - Prkab1 protein_coding retained_intron MGP_WSBEiJ_T0071174.1 MGP_WSBEiJ_G0028856.1 mouse_genomes_project 5 86201866 86266424 - MGP_WSBEiJ_P0071174 Tmprss11c protein_coding protein_coding MGP_WSBEiJ_T0071175.1 MGP_WSBEiJ_G0028856.1 mouse_genomes_project 5 86202137 86266376 - MGP_WSBEiJ_P0071175 Tmprss11c protein_coding protein_coding MGP_WSBEiJ_T0098341.1 MGP_WSBEiJ_G0037004.1 mouse_genomes_project 5 38588433 38588613 - Gm23022 snRNA snRNA MGP_WSBEiJ_T0001569.1 MGP_WSBEiJ_G0001493.1 mouse_genomes_project 5 56667363 56668718 + TEC TEC MGP_WSBEiJ_T0068907.1 MGP_WSBEiJ_G0028472.1 mouse_genomes_project 5 4286004 4286377 + 4921511H03Rik protein_coding processed_transcript MGP_WSBEiJ_T0068908.1 MGP_WSBEiJ_G0028472.1 mouse_genomes_project 5 4286010 4293381 + MGP_WSBEiJ_P0068908 4921511H03Rik protein_coding protein_coding MGP_WSBEiJ_T0068909.1 MGP_WSBEiJ_G0028472.1 mouse_genomes_project 5 4286017 4289458 + MGP_WSBEiJ_P0068909 4921511H03Rik protein_coding protein_coding MGP_WSBEiJ_T0068910.1 MGP_WSBEiJ_G0028472.1 mouse_genomes_project 5 4286031 4287694 + MGP_WSBEiJ_P0068910 4921511H03Rik protein_coding protein_coding MGP_WSBEiJ_T0014412.1 MGP_WSBEiJ_G0012542.1 mouse_genomes_project 5 1660607 1661439 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008072.1 MGP_WSBEiJ_G0006586.1 mouse_genomes_project 5 92281137 92283137 - Gm43688 lincRNA lincRNA MGP_WSBEiJ_T0014446.1 MGP_WSBEiJ_G0012576.1 mouse_genomes_project 5 18458475 18458849 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001636.1 MGP_WSBEiJ_G0001559.1 mouse_genomes_project 5 68572357 68580339 - TEC TEC MGP_WSBEiJ_T0074289.1 MGP_WSBEiJ_G0029467.1 mouse_genomes_project 5 143591136 143601689 - MGP_WSBEiJ_P0074289 Tmem184a protein_coding protein_coding MGP_WSBEiJ_T0074290.1 MGP_WSBEiJ_G0029467.1 mouse_genomes_project 5 143593603 143602727 - MGP_WSBEiJ_P0074290 Tmem184a protein_coding protein_coding MGP_WSBEiJ_T0074291.1 MGP_WSBEiJ_G0029467.1 mouse_genomes_project 5 143595918 143596632 - Tmem184a protein_coding retained_intron MGP_WSBEiJ_T0074293.1 MGP_WSBEiJ_G0029467.1 mouse_genomes_project 5 143597141 143602486 - MGP_WSBEiJ_P0074293 Tmem184a protein_coding protein_coding MGP_WSBEiJ_T0074294.1 MGP_WSBEiJ_G0029467.1 mouse_genomes_project 5 143601453 143608335 - MGP_WSBEiJ_P0074294 Tmem184a protein_coding protein_coding MGP_WSBEiJ_T0004555.1 MGP_WSBEiJ_G0003945.1 mouse_genomes_project 5 11130037 11148158 - Gm4128 antisense antisense MGP_WSBEiJ_T0014738.1 MGP_WSBEiJ_G0012868.1 mouse_genomes_project 5 146607570 146607799 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073670.1 MGP_WSBEiJ_G0029350.1 mouse_genomes_project 5 138439585 138444908 - MGP_WSBEiJ_P0073670 Vps37d protein_coding protein_coding MGP_WSBEiJ_T0073671.1 MGP_WSBEiJ_G0029350.1 mouse_genomes_project 5 138439588 138444908 - MGP_WSBEiJ_P0073671 Vps37d protein_coding protein_coding MGP_WSBEiJ_T0072731.1 MGP_WSBEiJ_G0029199.1 mouse_genomes_project 5 123498567 123564164 - MGP_WSBEiJ_P0072731 Ptpn11 protein_coding protein_coding MGP_WSBEiJ_T0072732.1 MGP_WSBEiJ_G0029199.1 mouse_genomes_project 5 123498569 123564134 - Ptpn11 protein_coding retained_intron MGP_WSBEiJ_T0072733.1 MGP_WSBEiJ_G0029199.1 mouse_genomes_project 5 123500083 123564160 - MGP_WSBEiJ_P0072733 Ptpn11 protein_coding protein_coding MGP_WSBEiJ_T0072734.1 MGP_WSBEiJ_G0029199.1 mouse_genomes_project 5 123503311 123513054 - Ptpn11 protein_coding processed_transcript MGP_WSBEiJ_T0069916.1 MGP_WSBEiJ_G0028644.1 mouse_genomes_project 5 31847728 31876940 - MGP_WSBEiJ_P0069916 Nelfa protein_coding protein_coding MGP_WSBEiJ_T0069917.1 MGP_WSBEiJ_G0028644.1 mouse_genomes_project 5 31858612 31876777 - Nelfa protein_coding retained_intron MGP_WSBEiJ_T0014689.1 MGP_WSBEiJ_G0012819.1 mouse_genomes_project 5 117043284 117043647 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001800.1 MGP_WSBEiJ_G0001721.1 mouse_genomes_project 5 132991646 132993507 + TEC TEC MGP_WSBEiJ_T0073601.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137910580 137929240 - MGP_WSBEiJ_P0073601 Lat2 protein_coding protein_coding MGP_WSBEiJ_T0073602.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137910661 137929205 - MGP_WSBEiJ_P0073602 Lat2 protein_coding protein_coding MGP_WSBEiJ_T0073603.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137910796 137921319 - MGP_WSBEiJ_P0073603 Lat2 protein_coding protein_coding MGP_WSBEiJ_T0073604.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137910989 137918658 - MGP_WSBEiJ_P0073604 Lat2 protein_coding protein_coding MGP_WSBEiJ_T0073605.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137911127 137918103 - Lat2 protein_coding processed_transcript MGP_WSBEiJ_T0073606.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137911356 137929221 - MGP_WSBEiJ_P0073606 Lat2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073607.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137911369 137916223 - Lat2 protein_coding retained_intron MGP_WSBEiJ_T0073608.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137917071 137929200 - Lat2 protein_coding processed_transcript MGP_WSBEiJ_T0073609.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137918232 137929181 - MGP_WSBEiJ_P0073609 Lat2 protein_coding protein_coding MGP_WSBEiJ_T0073610.1 MGP_WSBEiJ_G0029337.1 mouse_genomes_project 5 137918337 137920477 - Lat2 protein_coding retained_intron MGP_WSBEiJ_T0014652.1 MGP_WSBEiJ_G0012782.1 mouse_genomes_project 5 105920252 105920534 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072217.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114876791 114951797 - MGP_WSBEiJ_P0072217 Sgsm1 protein_coding protein_coding MGP_WSBEiJ_T0072218.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114876800 114920515 - MGP_WSBEiJ_P0072218 Sgsm1 protein_coding protein_coding MGP_WSBEiJ_T0072219.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114892221 114920515 - Sgsm1 protein_coding processed_transcript MGP_WSBEiJ_T0072220.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114892863 114951788 - Sgsm1 protein_coding processed_transcript MGP_WSBEiJ_T0072221.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114904307 114951750 - MGP_WSBEiJ_P0072221 Sgsm1 protein_coding protein_coding MGP_WSBEiJ_T0072222.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114904920 114951708 - MGP_WSBEiJ_P0072222 Sgsm1 protein_coding protein_coding MGP_WSBEiJ_T0072223.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114913895 114920501 - MGP_WSBEiJ_P0072223 Sgsm1 protein_coding protein_coding MGP_WSBEiJ_T0072224.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114915828 114919264 - Sgsm1 protein_coding retained_intron MGP_WSBEiJ_T0072225.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114919534 114922812 - Sgsm1 protein_coding retained_intron MGP_WSBEiJ_T0072226.1 MGP_WSBEiJ_G0029097.1 mouse_genomes_project 5 114925250 114951731 - Sgsm1 protein_coding retained_intron MGP_WSBEiJ_T0008178.1 MGP_WSBEiJ_G0006657.1 mouse_genomes_project 5 117164106 117181999 + Gm13830 lincRNA lincRNA MGP_WSBEiJ_T0008179.1 MGP_WSBEiJ_G0006657.1 mouse_genomes_project 5 117164122 117165285 + Gm13830 lincRNA lincRNA MGP_WSBEiJ_T0008180.1 MGP_WSBEiJ_G0006657.1 mouse_genomes_project 5 117164123 117180383 + Gm13830 lincRNA lincRNA MGP_WSBEiJ_T0008181.1 MGP_WSBEiJ_G0006657.1 mouse_genomes_project 5 117164133 117165318 + Gm13830 lincRNA lincRNA MGP_WSBEiJ_T0008182.1 MGP_WSBEiJ_G0006657.1 mouse_genomes_project 5 117164193 117164723 + Gm13830 lincRNA lincRNA MGP_WSBEiJ_T0074060.1 MGP_WSBEiJ_G0029421.1 mouse_genomes_project 5 141372743 141377501 - MGP_WSBEiJ_P0074060 Mepce protein_coding protein_coding MGP_WSBEiJ_T0074061.1 MGP_WSBEiJ_G0029421.1 mouse_genomes_project 5 141373266 141377553 - MGP_WSBEiJ_P0074061 Mepce protein_coding protein_coding MGP_WSBEiJ_T0074062.1 MGP_WSBEiJ_G0029421.1 mouse_genomes_project 5 141373320 141374188 - Mepce protein_coding retained_intron MGP_WSBEiJ_T0074063.1 MGP_WSBEiJ_G0029421.1 mouse_genomes_project 5 141373967 141378493 - MGP_WSBEiJ_P0074063 Mepce protein_coding protein_coding MGP_WSBEiJ_T0074064.1 MGP_WSBEiJ_G0029421.1 mouse_genomes_project 5 141375723 141377529 - Mepce protein_coding processed_transcript MGP_WSBEiJ_T0074480.1 MGP_WSBEiJ_G0029511.1 mouse_genomes_project 5 147788256 147810230 - MGP_WSBEiJ_P0074480 Usp42 protein_coding protein_coding MGP_WSBEiJ_T0074481.1 MGP_WSBEiJ_G0029511.1 mouse_genomes_project 5 147791683 147793543 - Usp42 protein_coding processed_transcript MGP_WSBEiJ_T0074482.1 MGP_WSBEiJ_G0029511.1 mouse_genomes_project 5 147791698 147795136 - Usp42 protein_coding retained_intron MGP_WSBEiJ_T0074483.1 MGP_WSBEiJ_G0029511.1 mouse_genomes_project 5 147794352 147805962 - Usp42 protein_coding retained_intron MGP_WSBEiJ_T0074484.1 MGP_WSBEiJ_G0029511.1 mouse_genomes_project 5 147799592 147800885 - Usp42 protein_coding retained_intron MGP_WSBEiJ_T0072403.1 MGP_WSBEiJ_G0029131.1 mouse_genomes_project 5 116734191 116749718 + MGP_WSBEiJ_P0072403 Oasl1 protein_coding protein_coding MGP_WSBEiJ_T0072404.1 MGP_WSBEiJ_G0029131.1 mouse_genomes_project 5 116734215 116749721 + MGP_WSBEiJ_P0072404 Oasl1 protein_coding protein_coding MGP_WSBEiJ_T0072405.1 MGP_WSBEiJ_G0029131.1 mouse_genomes_project 5 116734373 116747064 + Oasl1 protein_coding processed_transcript MGP_WSBEiJ_T0072406.1 MGP_WSBEiJ_G0029131.1 mouse_genomes_project 5 116734386 116747156 + Oasl1 protein_coding processed_transcript MGP_WSBEiJ_T0072407.1 MGP_WSBEiJ_G0029131.1 mouse_genomes_project 5 116740808 116744633 + Oasl1 protein_coding retained_intron MGP_WSBEiJ_T0072408.1 MGP_WSBEiJ_G0029131.1 mouse_genomes_project 5 116747113 116749493 + Oasl1 protein_coding processed_transcript MGP_WSBEiJ_T0001782.1 MGP_WSBEiJ_G0001704.1 mouse_genomes_project 5 127011842 127014314 - TEC TEC MGP_WSBEiJ_T0017590.1 MGP_WSBEiJ_G0015032.1 mouse_genomes_project 5 125992666 125994041 + 5830487J09Rik processed_transcript sense_intronic MGP_WSBEiJ_T0017591.1 MGP_WSBEiJ_G0015032.1 mouse_genomes_project 5 125993081 125994999 + 5830487J09Rik processed_transcript TEC MGP_WSBEiJ_T0001696.1 MGP_WSBEiJ_G0001618.1 mouse_genomes_project 5 104186425 104187558 + TEC TEC MGP_WSBEiJ_T0071282.1 MGP_WSBEiJ_G0028896.1 mouse_genomes_project 5 88734649 88741831 - Jchain protein_coding retained_intron MGP_WSBEiJ_T0071283.1 MGP_WSBEiJ_G0028896.1 mouse_genomes_project 5 88735358 88743058 - MGP_WSBEiJ_P0071283 Jchain protein_coding protein_coding MGP_WSBEiJ_T0070081.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33587881 33618483 + MGP_WSBEiJ_P0070081 Acox3 protein_coding protein_coding MGP_WSBEiJ_T0070082.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33587892 33617289 + MGP_WSBEiJ_P0070082 Acox3 protein_coding protein_coding MGP_WSBEiJ_T0070083.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33587919 33593545 + MGP_WSBEiJ_P0070083 Acox3 protein_coding protein_coding MGP_WSBEiJ_T0070084.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33587920 33620026 + MGP_WSBEiJ_P0070084 Acox3 protein_coding protein_coding MGP_WSBEiJ_T0070085.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33587933 33592240 + Acox3 protein_coding retained_intron MGP_WSBEiJ_T0070086.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33587943 33616558 + MGP_WSBEiJ_P0070086 Acox3 protein_coding protein_coding MGP_WSBEiJ_T0070087.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33588364 33616552 + MGP_WSBEiJ_P0070087 Acox3 protein_coding protein_coding MGP_WSBEiJ_T0070088.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33606340 33613032 + MGP_WSBEiJ_P0070088 Acox3 protein_coding protein_coding MGP_WSBEiJ_T0070089.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33611668 33614608 + Acox3 protein_coding retained_intron MGP_WSBEiJ_T0070090.1 MGP_WSBEiJ_G0028670.1 mouse_genomes_project 5 33614787 33616569 + Acox3 protein_coding retained_intron MGP_WSBEiJ_T0011390.1 MGP_WSBEiJ_G0009547.1 mouse_genomes_project 5 22394925 22395170 - Gm25363 misc_RNA misc_RNA MGP_WSBEiJ_T0074536.1 MGP_WSBEiJ_G0029523.1 mouse_genomes_project 5 148308409 148329614 + MGP_WSBEiJ_P0074536 Bri3 protein_coding protein_coding MGP_WSBEiJ_T0074537.1 MGP_WSBEiJ_G0029523.1 mouse_genomes_project 5 148319167 148532929 + MGP_WSBEiJ_P0074537 Bri3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074538.1 MGP_WSBEiJ_G0029523.1 mouse_genomes_project 5 148319176 148329793 + MGP_WSBEiJ_P0074538 Bri3 protein_coding protein_coding MGP_WSBEiJ_T0072019.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541268 111542013 + MGP_WSBEiJ_P0072019 Chfr protein_coding protein_coding MGP_WSBEiJ_T0072020.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541275 111569353 + MGP_WSBEiJ_P0072020 Chfr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072021.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541275 111577346 + MGP_WSBEiJ_P0072021 Chfr protein_coding protein_coding MGP_WSBEiJ_T0072022.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541277 111576895 + MGP_WSBEiJ_P0072022 Chfr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072023.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541283 111577034 + MGP_WSBEiJ_P0072023 Chfr protein_coding protein_coding MGP_WSBEiJ_T0072024.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541286 111573776 + Chfr protein_coding retained_intron MGP_WSBEiJ_T0072025.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541286 111577347 + MGP_WSBEiJ_P0072025 Chfr protein_coding protein_coding MGP_WSBEiJ_T0072026.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541304 111577344 + MGP_WSBEiJ_P0072026 Chfr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072027.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541333 111552002 + MGP_WSBEiJ_P0072027 Chfr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072028.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111541351 111549112 + MGP_WSBEiJ_P0072028 Chfr protein_coding protein_coding MGP_WSBEiJ_T0072029.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111560749 111568500 + Chfr protein_coding retained_intron MGP_WSBEiJ_T0072030.1 MGP_WSBEiJ_G0029060.1 mouse_genomes_project 5 111569351 111576380 + Chfr protein_coding retained_intron MGP_WSBEiJ_T0071656.1 MGP_WSBEiJ_G0028980.1 mouse_genomes_project 5 101553833 101554780 + Mrps18c protein_coding retained_intron MGP_WSBEiJ_T0071657.1 MGP_WSBEiJ_G0028980.1 mouse_genomes_project 5 101553833 101559545 + MGP_WSBEiJ_P0071657 Mrps18c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071658.1 MGP_WSBEiJ_G0028980.1 mouse_genomes_project 5 101553837 101559548 + MGP_WSBEiJ_P0071658 Mrps18c protein_coding protein_coding MGP_WSBEiJ_T0071659.1 MGP_WSBEiJ_G0028980.1 mouse_genomes_project 5 101553860 101559485 + MGP_WSBEiJ_P0071659 Mrps18c protein_coding protein_coding MGP_WSBEiJ_T0071660.1 MGP_WSBEiJ_G0028980.1 mouse_genomes_project 5 101559015 101559546 + Mrps18c protein_coding retained_intron MGP_WSBEiJ_T0072353.1 MGP_WSBEiJ_G0029122.1 mouse_genomes_project 5 116452544 116474076 - MGP_WSBEiJ_P0072353 Gltp protein_coding protein_coding MGP_WSBEiJ_T0072354.1 MGP_WSBEiJ_G0029122.1 mouse_genomes_project 5 116453226 116474033 - MGP_WSBEiJ_P0072354 Gltp protein_coding protein_coding MGP_WSBEiJ_T0072355.1 MGP_WSBEiJ_G0029122.1 mouse_genomes_project 5 116453371 116474000 - MGP_WSBEiJ_P0072355 Gltp protein_coding protein_coding MGP_WSBEiJ_T0014722.1 MGP_WSBEiJ_G0012852.1 mouse_genomes_project 5 141464957 141465345 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001535.1 MGP_WSBEiJ_G0001459.1 mouse_genomes_project 5 47461543 47463206 - TEC TEC MGP_WSBEiJ_T0073906.1 MGP_WSBEiJ_G0029393.1 mouse_genomes_project 5 140602718 140613335 - MGP_WSBEiJ_P0073906 Serpine1 protein_coding protein_coding MGP_WSBEiJ_T0073907.1 MGP_WSBEiJ_G0029393.1 mouse_genomes_project 5 140602726 140613330 - MGP_WSBEiJ_P0073907 Serpine1 protein_coding protein_coding MGP_WSBEiJ_T0073908.1 MGP_WSBEiJ_G0029393.1 mouse_genomes_project 5 140611280 140613344 - Serpine1 protein_coding retained_intron MGP_WSBEiJ_T0014493.1 MGP_WSBEiJ_G0012623.1 mouse_genomes_project 5 28012481 28012848 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074161.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141874675 141885181 + MGP_WSBEiJ_P0074161 Stag3 protein_coding protein_coding MGP_WSBEiJ_T0074162.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141874944 141906581 + Stag3 protein_coding retained_intron MGP_WSBEiJ_T0074163.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141874961 141906578 + Stag3 protein_coding retained_intron MGP_WSBEiJ_T0074164.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141874961 141906581 + MGP_WSBEiJ_P0074164 Stag3 protein_coding protein_coding MGP_WSBEiJ_T0074165.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141874979 141906581 + MGP_WSBEiJ_P0074165 Stag3 protein_coding protein_coding MGP_WSBEiJ_T0074166.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141874991 141884836 + MGP_WSBEiJ_P0074166 Stag3 protein_coding protein_coding MGP_WSBEiJ_T0074167.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141893586 141895852 + Stag3 protein_coding processed_transcript MGP_WSBEiJ_T0074168.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141898827 141903633 + MGP_WSBEiJ_P0074168 Stag3 protein_coding protein_coding MGP_WSBEiJ_T0074169.1 MGP_WSBEiJ_G0029444.1 mouse_genomes_project 5 141903587 141906574 + MGP_WSBEiJ_P0074169 Stag3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099589.1 MGP_WSBEiJ_G0038252.1 mouse_genomes_project 5 55396773 55396903 + Gm23896 snoRNA snoRNA MGP_WSBEiJ_T0072597.1 MGP_WSBEiJ_G0029167.1 mouse_genomes_project 5 119393488 119406200 - MGP_WSBEiJ_P0072597 Rfc5 protein_coding protein_coding MGP_WSBEiJ_T0072598.1 MGP_WSBEiJ_G0029167.1 mouse_genomes_project 5 119395750 119406175 - Rfc5 protein_coding retained_intron MGP_WSBEiJ_T0072599.1 MGP_WSBEiJ_G0029167.1 mouse_genomes_project 5 119396770 119398005 - Rfc5 protein_coding retained_intron MGP_WSBEiJ_T0072600.1 MGP_WSBEiJ_G0029167.1 mouse_genomes_project 5 119396994 119397370 - Rfc5 protein_coding retained_intron MGP_WSBEiJ_T0072601.1 MGP_WSBEiJ_G0029167.1 mouse_genomes_project 5 119398869 119403985 - Rfc5 protein_coding retained_intron MGP_WSBEiJ_T0072602.1 MGP_WSBEiJ_G0029167.1 mouse_genomes_project 5 119403434 119406198 - MGP_WSBEiJ_P0072602 Rfc5 protein_coding protein_coding MGP_WSBEiJ_T0070481.1 MGP_WSBEiJ_G0028738.1 mouse_genomes_project 5 51190503 51249846 + Zcchc4 protein_coding processed_transcript MGP_WSBEiJ_T0070482.1 MGP_WSBEiJ_G0028738.1 mouse_genomes_project 5 51205718 51249589 + MGP_WSBEiJ_P0070482 Zcchc4 protein_coding protein_coding MGP_WSBEiJ_T0070483.1 MGP_WSBEiJ_G0028738.1 mouse_genomes_project 5 51205718 51250685 + MGP_WSBEiJ_P0070483 Zcchc4 protein_coding protein_coding MGP_WSBEiJ_T0070484.1 MGP_WSBEiJ_G0028738.1 mouse_genomes_project 5 51205750 51222807 + Zcchc4 protein_coding retained_intron MGP_WSBEiJ_T0070485.1 MGP_WSBEiJ_G0028738.1 mouse_genomes_project 5 51205780 51218738 + MGP_WSBEiJ_P0070485 Zcchc4 protein_coding protein_coding MGP_WSBEiJ_T0070486.1 MGP_WSBEiJ_G0028738.1 mouse_genomes_project 5 51205786 51218770 + Zcchc4 protein_coding processed_transcript MGP_WSBEiJ_T0070487.1 MGP_WSBEiJ_G0028738.1 mouse_genomes_project 5 51220668 51245200 + Zcchc4 protein_coding processed_transcript MGP_WSBEiJ_T0070488.1 MGP_WSBEiJ_G0028738.1 mouse_genomes_project 5 51230429 51241921 + Zcchc4 protein_coding retained_intron MGP_WSBEiJ_T0001749.1 MGP_WSBEiJ_G0001671.1 mouse_genomes_project 5 120758224 120763195 + TEC TEC MGP_WSBEiJ_T0001450.1 MGP_WSBEiJ_G0001377.1 mouse_genomes_project 5 28845833 28848151 + TEC TEC MGP_WSBEiJ_T0001451.1 MGP_WSBEiJ_G0001377.1 mouse_genomes_project 5 28845835 28848151 + TEC TEC MGP_WSBEiJ_T0001415.1 MGP_WSBEiJ_G0001343.1 mouse_genomes_project 5 10631595 10633451 - TEC TEC MGP_WSBEiJ_T0004715.1 MGP_WSBEiJ_G0004066.1 mouse_genomes_project 5 118187538 118199531 + Gm14507 antisense antisense MGP_WSBEiJ_T0097419.1 MGP_WSBEiJ_G0036093.1 mouse_genomes_project 5 111618305 111619013 + Gm43138 sense_intronic sense_intronic MGP_WSBEiJ_T0072474.1 MGP_WSBEiJ_G0029148.1 mouse_genomes_project 5 117303370 117325100 + Msi1 protein_coding retained_intron MGP_WSBEiJ_T0072475.1 MGP_WSBEiJ_G0029148.1 mouse_genomes_project 5 117303419 117332994 + MGP_WSBEiJ_P0072475 Msi1 protein_coding protein_coding MGP_WSBEiJ_T0072476.1 MGP_WSBEiJ_G0029148.1 mouse_genomes_project 5 117305288 117328190 + MGP_WSBEiJ_P0072476 Msi1 protein_coding protein_coding MGP_WSBEiJ_T0072477.1 MGP_WSBEiJ_G0029148.1 mouse_genomes_project 5 117308077 117310629 + Msi1 protein_coding retained_intron MGP_WSBEiJ_T0072478.1 MGP_WSBEiJ_G0029148.1 mouse_genomes_project 5 117308728 117328183 + Msi1 protein_coding retained_intron MGP_WSBEiJ_T0072479.1 MGP_WSBEiJ_G0029148.1 mouse_genomes_project 5 117309277 117321586 + Msi1 protein_coding retained_intron MGP_WSBEiJ_T0072480.1 MGP_WSBEiJ_G0029148.1 mouse_genomes_project 5 117309973 117328167 + MGP_WSBEiJ_P0072480 Msi1 protein_coding protein_coding MGP_WSBEiJ_T0072481.1 MGP_WSBEiJ_G0029148.1 mouse_genomes_project 5 117310475 117321805 + Msi1 protein_coding retained_intron MGP_WSBEiJ_T0014580.1 MGP_WSBEiJ_G0012710.1 mouse_genomes_project 5 69176828 69177112 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008316.1 MGP_WSBEiJ_G0006753.1 mouse_genomes_project 5 153316383 153333676 + Gm15407 lincRNA lincRNA MGP_WSBEiJ_T0014755.1 MGP_WSBEiJ_G0012885.1 mouse_genomes_project 5 150298587 150299406 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073926.1 MGP_WSBEiJ_G0029398.1 mouse_genomes_project 5 140834785 140835822 + MGP_WSBEiJ_P0073926 Ufsp1 protein_coding protein_coding MGP_WSBEiJ_T0069778.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30059849 30165291 + Plb1 protein_coding retained_intron MGP_WSBEiJ_T0069779.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30059851 30078446 + Plb1 protein_coding processed_transcript MGP_WSBEiJ_T0069780.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30059851 30062747 + Plb1 protein_coding retained_intron MGP_WSBEiJ_T0069781.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30059855 30202563 + MGP_WSBEiJ_P0069781 Plb1 protein_coding protein_coding MGP_WSBEiJ_T0069782.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30059889 30127422 + Plb1 protein_coding retained_intron MGP_WSBEiJ_T0069783.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30067384 30156290 + MGP_WSBEiJ_P0069783 Plb1 protein_coding protein_coding MGP_WSBEiJ_T0069784.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30075655 30202565 + MGP_WSBEiJ_P0069784 Plb1 protein_coding protein_coding MGP_WSBEiJ_T0069785.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30191097 30204729 + Plb1 protein_coding processed_transcript MGP_WSBEiJ_T0069786.1 MGP_WSBEiJ_G0028623.1 mouse_genomes_project 5 30192222 30202558 + Plb1 protein_coding processed_transcript MGP_WSBEiJ_T0014757.1 MGP_WSBEiJ_G0012887.1 mouse_genomes_project 5 150494947 150495421 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071311.1 MGP_WSBEiJ_G0028903.1 mouse_genomes_project 5 89659891 89699903 - MGP_WSBEiJ_P0071311 Gc protein_coding protein_coding MGP_WSBEiJ_T0071312.1 MGP_WSBEiJ_G0028903.1 mouse_genomes_project 5 89664286 89671078 - MGP_WSBEiJ_P0071312 Gc protein_coding protein_coding MGP_WSBEiJ_T0074629.1 MGP_WSBEiJ_G0029542.1 mouse_genomes_project 5 149438169 149444132 + MGP_WSBEiJ_P0074629 protein_coding protein_coding MGP_WSBEiJ_T0074630.1 MGP_WSBEiJ_G0029542.1 mouse_genomes_project 5 149438178 149452527 + MGP_WSBEiJ_P0074630 protein_coding unknown_likely_coding MGP_WSBEiJ_T0074631.1 MGP_WSBEiJ_G0029542.1 mouse_genomes_project 5 149441021 149452645 + MGP_WSBEiJ_P0074631 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098393.1 MGP_WSBEiJ_G0037056.1 mouse_genomes_project 5 143193669 143193776 + Gm26285 snRNA snRNA MGP_WSBEiJ_T0069601.1 MGP_WSBEiJ_G0028600.1 mouse_genomes_project 5 28891915 28892682 - MGP_WSBEiJ_P0069601 Ucn protein_coding protein_coding MGP_WSBEiJ_T0069602.1 MGP_WSBEiJ_G0028600.1 mouse_genomes_project 5 28891915 28892682 - MGP_WSBEiJ_P0069602 Ucn protein_coding protein_coding MGP_WSBEiJ_T0014541.1 MGP_WSBEiJ_G0012671.1 mouse_genomes_project 5 54181420 54182126 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017564.1 MGP_WSBEiJ_G0015022.1 mouse_genomes_project 5 64884595 64887478 - N4bp2os processed_transcript antisense MGP_WSBEiJ_T0017565.1 MGP_WSBEiJ_G0015022.1 mouse_genomes_project 5 64885049 64886970 - N4bp2os processed_transcript antisense MGP_WSBEiJ_T0017566.1 MGP_WSBEiJ_G0015022.1 mouse_genomes_project 5 64885986 64888953 - N4bp2os processed_transcript retained_intron MGP_WSBEiJ_T0017567.1 MGP_WSBEiJ_G0015023.1 mouse_genomes_project 5 66692446 66699384 + C330024D21Rik processed_transcript retained_intron MGP_WSBEiJ_T0017568.1 MGP_WSBEiJ_G0015023.1 mouse_genomes_project 5 66692449 66707166 + C330024D21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017569.1 MGP_WSBEiJ_G0015023.1 mouse_genomes_project 5 66692452 66706832 + C330024D21Rik processed_transcript lincRNA MGP_WSBEiJ_T0072423.1 MGP_WSBEiJ_G0029135.1 mouse_genomes_project 5 116923691 116924298 - MGP_WSBEiJ_P0072423 Gm10401 protein_coding protein_coding MGP_WSBEiJ_T0010521.1 MGP_WSBEiJ_G0008678.1 mouse_genomes_project 5 82655864 82655980 - Mir1187 miRNA miRNA MGP_WSBEiJ_T0074514.1 MGP_WSBEiJ_G0029518.1 mouse_genomes_project 5 148034089 148064959 - MGP_WSBEiJ_P0074514 Ccz1 protein_coding protein_coding MGP_WSBEiJ_T0074515.1 MGP_WSBEiJ_G0029518.1 mouse_genomes_project 5 148037655 148038765 - Ccz1 protein_coding processed_transcript MGP_WSBEiJ_T0074516.1 MGP_WSBEiJ_G0029518.1 mouse_genomes_project 5 148038658 148050349 - Ccz1 protein_coding retained_intron MGP_WSBEiJ_T0074517.1 MGP_WSBEiJ_G0029518.1 mouse_genomes_project 5 148057587 148064983 - Ccz1 protein_coding retained_intron MGP_WSBEiJ_T0074518.1 MGP_WSBEiJ_G0029518.1 mouse_genomes_project 5 148060843 148064983 - Ccz1 protein_coding retained_intron MGP_WSBEiJ_T0068861.1 MGP_WSBEiJ_G0028465.1 mouse_genomes_project 5 2366166 2411302 - MGP_WSBEiJ_P0068861 1700015F17Rik protein_coding protein_coding MGP_WSBEiJ_T0068862.1 MGP_WSBEiJ_G0028465.1 mouse_genomes_project 5 2366166 2394809 - MGP_WSBEiJ_P0068862 1700015F17Rik protein_coding protein_coding MGP_WSBEiJ_T0068863.1 MGP_WSBEiJ_G0028465.1 mouse_genomes_project 5 2366171 2411239 - MGP_WSBEiJ_P0068863 1700015F17Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074853.1 MGP_WSBEiJ_G0029586.1 mouse_genomes_project 5 155200671 155223489 - MGP_WSBEiJ_P0074853 N4bp2l1 protein_coding protein_coding MGP_WSBEiJ_T0074854.1 MGP_WSBEiJ_G0029586.1 mouse_genomes_project 5 155200674 155206015 - MGP_WSBEiJ_P0074854 N4bp2l1 protein_coding protein_coding MGP_WSBEiJ_T0074855.1 MGP_WSBEiJ_G0029586.1 mouse_genomes_project 5 155201692 155223426 - MGP_WSBEiJ_P0074855 N4bp2l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074856.1 MGP_WSBEiJ_G0029586.1 mouse_genomes_project 5 155203027 155226152 - MGP_WSBEiJ_P0074856 N4bp2l1 protein_coding protein_coding MGP_WSBEiJ_T0074857.1 MGP_WSBEiJ_G0029586.1 mouse_genomes_project 5 155220715 155223492 - MGP_WSBEiJ_P0074857 N4bp2l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074858.1 MGP_WSBEiJ_G0029586.1 mouse_genomes_project 5 155220718 155223464 - MGP_WSBEiJ_P0074858 N4bp2l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074859.1 MGP_WSBEiJ_G0029586.1 mouse_genomes_project 5 155221406 155222733 - N4bp2l1 protein_coding retained_intron MGP_WSBEiJ_T0071921.1 MGP_WSBEiJ_G0029037.1 mouse_genomes_project 5 109419261 109432226 + MGP_WSBEiJ_P0071921 Dr1 protein_coding protein_coding MGP_WSBEiJ_T0071922.1 MGP_WSBEiJ_G0029037.1 mouse_genomes_project 5 109428619 109430315 + Dr1 protein_coding processed_transcript MGP_WSBEiJ_T0071285.1 MGP_WSBEiJ_G0028898.1 mouse_genomes_project 5 88773750 88847302 + MGP_WSBEiJ_P0071285 Rufy3 protein_coding protein_coding MGP_WSBEiJ_T0071286.1 MGP_WSBEiJ_G0028898.1 mouse_genomes_project 5 88773750 88856341 + MGP_WSBEiJ_P0071286 Rufy3 protein_coding protein_coding MGP_WSBEiJ_T0071287.1 MGP_WSBEiJ_G0028898.1 mouse_genomes_project 5 88796925 88845534 + MGP_WSBEiJ_P0071287 Rufy3 protein_coding protein_coding MGP_WSBEiJ_T0071288.1 MGP_WSBEiJ_G0028898.1 mouse_genomes_project 5 88796948 88847303 + MGP_WSBEiJ_P0071288 Rufy3 protein_coding protein_coding MGP_WSBEiJ_T0071289.1 MGP_WSBEiJ_G0028898.1 mouse_genomes_project 5 88796989 88799321 + Rufy3 protein_coding retained_intron MGP_WSBEiJ_T0071290.1 MGP_WSBEiJ_G0028898.1 mouse_genomes_project 5 88796990 88824336 + Rufy3 protein_coding retained_intron MGP_WSBEiJ_T0071291.1 MGP_WSBEiJ_G0028898.1 mouse_genomes_project 5 88797206 88845535 + MGP_WSBEiJ_P0071291 Rufy3 protein_coding protein_coding MGP_WSBEiJ_T0071292.1 MGP_WSBEiJ_G0028898.1 mouse_genomes_project 5 88851297 88852925 + Rufy3 protein_coding retained_intron MGP_WSBEiJ_T0070944.1 MGP_WSBEiJ_G0028818.1 mouse_genomes_project 5 73399862 73477993 - MGP_WSBEiJ_P0070944 Usp46 protein_coding protein_coding MGP_WSBEiJ_T0070945.1 MGP_WSBEiJ_G0028818.1 mouse_genomes_project 5 73400131 73478004 - MGP_WSBEiJ_P0070945 Usp46 protein_coding protein_coding MGP_WSBEiJ_T0070946.1 MGP_WSBEiJ_G0028818.1 mouse_genomes_project 5 73403232 73441248 - Usp46 protein_coding processed_transcript MGP_WSBEiJ_T0070947.1 MGP_WSBEiJ_G0028818.1 mouse_genomes_project 5 73430050 73435062 - MGP_WSBEiJ_P0070947 Usp46 protein_coding protein_coding MGP_WSBEiJ_T0070948.1 MGP_WSBEiJ_G0028818.1 mouse_genomes_project 5 73434963 73438205 - Usp46 protein_coding retained_intron MGP_WSBEiJ_T0070949.1 MGP_WSBEiJ_G0028818.1 mouse_genomes_project 5 73435009 73475311 - MGP_WSBEiJ_P0070949 Usp46 protein_coding protein_coding MGP_WSBEiJ_T0014745.1 MGP_WSBEiJ_G0012875.1 mouse_genomes_project 5 148329222 148329360 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001693.1 MGP_WSBEiJ_G0001615.1 mouse_genomes_project 5 102788889 102790234 + TEC TEC MGP_WSBEiJ_T0010490.1 MGP_WSBEiJ_G0008647.1 mouse_genomes_project 5 548036 548104 + Gm22926 miRNA miRNA MGP_WSBEiJ_T0001675.1 MGP_WSBEiJ_G0001597.1 mouse_genomes_project 5 93526775 93527368 - TEC TEC MGP_WSBEiJ_T0069722.1 MGP_WSBEiJ_G0028616.1 mouse_genomes_project 5 29283700 29302874 + MGP_WSBEiJ_P0069722 Gpn1 protein_coding protein_coding MGP_WSBEiJ_T0069723.1 MGP_WSBEiJ_G0028616.1 mouse_genomes_project 5 29283711 29291983 + Gpn1 protein_coding retained_intron MGP_WSBEiJ_T0069724.1 MGP_WSBEiJ_G0028616.1 mouse_genomes_project 5 29283712 29286676 + MGP_WSBEiJ_P0069724 Gpn1 protein_coding protein_coding MGP_WSBEiJ_T0069725.1 MGP_WSBEiJ_G0028616.1 mouse_genomes_project 5 29283726 29288241 + MGP_WSBEiJ_P0069725 Gpn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069726.1 MGP_WSBEiJ_G0028616.1 mouse_genomes_project 5 29283753 29292489 + Gpn1 protein_coding retained_intron MGP_WSBEiJ_T0069727.1 MGP_WSBEiJ_G0028616.1 mouse_genomes_project 5 29283960 29286284 + Gpn1 protein_coding processed_transcript MGP_WSBEiJ_T0069728.1 MGP_WSBEiJ_G0028616.1 mouse_genomes_project 5 29297030 29300829 + Gpn1 protein_coding retained_intron MGP_WSBEiJ_T0001484.1 MGP_WSBEiJ_G0001409.1 mouse_genomes_project 5 41449316 41450528 + TEC TEC MGP_WSBEiJ_T0008108.1 MGP_WSBEiJ_G0006614.1 mouse_genomes_project 5 104189001 104191564 + lincRNA lincRNA MGP_WSBEiJ_T0001604.1 MGP_WSBEiJ_G0001527.1 mouse_genomes_project 5 65094525 65095426 + TEC TEC MGP_WSBEiJ_T0001406.1 MGP_WSBEiJ_G0001334.1 mouse_genomes_project 5 6585581 6589392 - TEC TEC MGP_WSBEiJ_T0001648.1 MGP_WSBEiJ_G0001570.1 mouse_genomes_project 5 73037510 73038089 - TEC TEC MGP_WSBEiJ_T0010565.1 MGP_WSBEiJ_G0008722.1 mouse_genomes_project 5 144923468 144923549 + Gm44385 miRNA miRNA MGP_WSBEiJ_T0071277.1 MGP_WSBEiJ_G0028893.1 mouse_genomes_project 5 88592912 88604528 + MGP_WSBEiJ_P0071277 Amtn protein_coding protein_coding MGP_WSBEiJ_T0007951.1 MGP_WSBEiJ_G0006494.1 mouse_genomes_project 5 27745952 27759621 - Gm42806 lincRNA lincRNA MGP_WSBEiJ_T0007952.1 MGP_WSBEiJ_G0006494.1 mouse_genomes_project 5 27754277 27758633 - Gm42806 lincRNA lincRNA MGP_WSBEiJ_T0014587.1 MGP_WSBEiJ_G0012717.1 mouse_genomes_project 5 72772825 72773816 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001543.1 MGP_WSBEiJ_G0001467.1 mouse_genomes_project 5 49184025 49187271 + TEC TEC MGP_WSBEiJ_T0010512.1 MGP_WSBEiJ_G0008669.1 mouse_genomes_project 5 63138904 63139000 - Gm22395 miRNA miRNA MGP_WSBEiJ_T0070431.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46661048 46710785 + 5730480H06Rik protein_coding processed_transcript MGP_WSBEiJ_T0070432.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46702780 46720482 + MGP_WSBEiJ_P0070432 5730480H06Rik protein_coding protein_coding MGP_WSBEiJ_T0070433.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46702780 46720482 + MGP_WSBEiJ_P0070433 5730480H06Rik protein_coding protein_coding MGP_WSBEiJ_T0070434.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46702884 46720483 + MGP_WSBEiJ_P0070434 5730480H06Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070435.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46704890 46727256 + MGP_WSBEiJ_P0070435 5730480H06Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070436.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46710698 46720195 + 5730480H06Rik protein_coding retained_intron MGP_WSBEiJ_T0070444.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46724474 46729892 + 5730480H06Rik protein_coding retained_intron MGP_WSBEiJ_T0070445.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46727215 46748401 + 5730480H06Rik protein_coding retained_intron MGP_WSBEiJ_T0070447.1 MGP_WSBEiJ_G0028728.1 mouse_genomes_project 5 46728311 46748430 + 5730480H06Rik protein_coding processed_transcript MGP_WSBEiJ_T0001702.1 MGP_WSBEiJ_G0001624.1 mouse_genomes_project 5 106504146 106506331 + TEC TEC MGP_WSBEiJ_T0008237.1 MGP_WSBEiJ_G0006697.1 mouse_genomes_project 5 128745633 128749582 - Gm42945 lincRNA lincRNA MGP_WSBEiJ_T0008238.1 MGP_WSBEiJ_G0006697.1 mouse_genomes_project 5 128745647 128753081 - Gm42945 lincRNA lincRNA MGP_WSBEiJ_T0100284.1 MGP_WSBEiJ_G0038798.1 mouse_genomes_project 5 73776552 73778412 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0072493.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117401908 117451415 + MGP_WSBEiJ_P0072493 Pxn protein_coding protein_coding MGP_WSBEiJ_T0072494.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117401943 117451410 + Pxn protein_coding retained_intron MGP_WSBEiJ_T0072495.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117402088 117451415 + MGP_WSBEiJ_P0072495 Pxn protein_coding protein_coding MGP_WSBEiJ_T0072496.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117411628 117440322 + Pxn protein_coding processed_transcript MGP_WSBEiJ_T0072497.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117415531 117451410 + Pxn protein_coding processed_transcript MGP_WSBEiJ_T0072498.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117439385 117440851 + Pxn protein_coding processed_transcript MGP_WSBEiJ_T0072499.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117439552 117440387 + Pxn protein_coding retained_intron MGP_WSBEiJ_T0072500.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117440234 117445194 + Pxn protein_coding retained_intron MGP_WSBEiJ_T0072501.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117440742 117441214 + Pxn protein_coding retained_intron MGP_WSBEiJ_T0072502.1 MGP_WSBEiJ_G0029151.1 mouse_genomes_project 5 117447374 117448228 + Pxn protein_coding retained_intron MGP_WSBEiJ_T0001669.1 MGP_WSBEiJ_G0001591.1 mouse_genomes_project 5 90710195 90712846 + TEC TEC MGP_WSBEiJ_T0069999.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32606985 32610533 - MGP_WSBEiJ_P0069999 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0070000.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32606989 32610556 - MGP_WSBEiJ_P0070000 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0070001.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32606990 32608071 - Mfsd10 protein_coding retained_intron MGP_WSBEiJ_T0070002.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32606991 32607973 - Mfsd10 protein_coding retained_intron MGP_WSBEiJ_T0070003.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32606992 32610536 - MGP_WSBEiJ_P0070003 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0070004.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32607068 32610151 - MGP_WSBEiJ_P0070004 Mfsd10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070005.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32607258 32608235 - Mfsd10 protein_coding retained_intron MGP_WSBEiJ_T0070006.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32607338 32609468 - Mfsd10 protein_coding retained_intron MGP_WSBEiJ_T0070007.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32607657 32608869 - MGP_WSBEiJ_P0070007 Mfsd10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070008.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32607974 32608409 - MGP_WSBEiJ_P0070008 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0070009.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32607998 32609460 - MGP_WSBEiJ_P0070009 Mfsd10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070010.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32608194 32609099 - MGP_WSBEiJ_P0070010 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0070011.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32608275 32610533 - MGP_WSBEiJ_P0070011 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0070012.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32608400 32610185 - MGP_WSBEiJ_P0070012 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0070013.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32608407 32608967 - MGP_WSBEiJ_P0070013 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0070014.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32608431 32608845 - Mfsd10 protein_coding retained_intron MGP_WSBEiJ_T0070015.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32608453 32610469 - MGP_WSBEiJ_P0070015 Mfsd10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070016.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32608729 32609866 - Mfsd10 protein_coding processed_transcript MGP_WSBEiJ_T0070017.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32608956 32609879 - Mfsd10 protein_coding processed_transcript MGP_WSBEiJ_T0070018.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32609372 32610404 - Mfsd10 protein_coding retained_intron MGP_WSBEiJ_T0070019.1 MGP_WSBEiJ_G0028657.1 mouse_genomes_project 5 32609937 32610484 - MGP_WSBEiJ_P0070019 Mfsd10 protein_coding protein_coding MGP_WSBEiJ_T0014619.1 MGP_WSBEiJ_G0012749.1 mouse_genomes_project 5 88317345 88317700 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097431.1 MGP_WSBEiJ_G0036104.1 mouse_genomes_project 5 148343520 148346947 + Gm15708 sense_intronic sense_intronic MGP_WSBEiJ_T0097432.1 MGP_WSBEiJ_G0036104.1 mouse_genomes_project 5 148345311 148346916 + Gm15708 sense_intronic sense_intronic MGP_WSBEiJ_T0072457.1 MGP_WSBEiJ_G0029142.1 mouse_genomes_project 5 117139545 117159505 + MGP_WSBEiJ_P0072457 Coq5 protein_coding protein_coding MGP_WSBEiJ_T0072458.1 MGP_WSBEiJ_G0029142.1 mouse_genomes_project 5 117139574 117140764 + Coq5 protein_coding retained_intron MGP_WSBEiJ_T0072459.1 MGP_WSBEiJ_G0029142.1 mouse_genomes_project 5 117145026 117158842 + MGP_WSBEiJ_P0072459 Coq5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001764.1 MGP_WSBEiJ_G0001686.1 mouse_genomes_project 5 124347332 124348506 - TEC TEC MGP_WSBEiJ_T0100104.1 MGP_WSBEiJ_G0038708.1 mouse_genomes_project 5 56640851 56641426 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099615.1 MGP_WSBEiJ_G0038278.1 mouse_genomes_project 5 109020997 109021091 + Snord21 snoRNA snoRNA MGP_WSBEiJ_T0069323.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22443154 22694594 - MGP_WSBEiJ_P0069323 Prkag2 protein_coding protein_coding MGP_WSBEiJ_T0069324.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22443158 22488792 - MGP_WSBEiJ_P0069324 Prkag2 protein_coding protein_coding MGP_WSBEiJ_T0069325.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22443158 22586812 - MGP_WSBEiJ_P0069325 Prkag2 protein_coding protein_coding MGP_WSBEiJ_T0069326.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22444183 22453210 - Prkag2 protein_coding retained_intron MGP_WSBEiJ_T0069327.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22450596 22488832 - MGP_WSBEiJ_P0069327 Prkag2 protein_coding protein_coding MGP_WSBEiJ_T0069328.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22452993 22482970 - MGP_WSBEiJ_P0069328 Prkag2 protein_coding protein_coding MGP_WSBEiJ_T0069329.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22456333 22469610 - Prkag2 protein_coding retained_intron MGP_WSBEiJ_T0069330.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22456859 22488775 - Prkag2 protein_coding retained_intron MGP_WSBEiJ_T0069331.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22469618 22489298 - MGP_WSBEiJ_P0069331 Prkag2 protein_coding protein_coding MGP_WSBEiJ_T0069332.1 MGP_WSBEiJ_G0028546.1 mouse_genomes_project 5 22486553 22488773 - Prkag2 protein_coding processed_transcript MGP_WSBEiJ_T0070299.1 MGP_WSBEiJ_G0028707.1 mouse_genomes_project 5 39936091 39939118 - MGP_WSBEiJ_P0070299 Nkx3-2 protein_coding protein_coding MGP_WSBEiJ_T0071267.1 MGP_WSBEiJ_G0028884.1 mouse_genomes_project 5 88097844 88101255 + MGP_WSBEiJ_P0071267 2310003L06Rik protein_coding protein_coding MGP_WSBEiJ_T0069484.1 MGP_WSBEiJ_G0028582.1 mouse_genomes_project 5 28387783 28398129 + MGP_WSBEiJ_P0069484 Slc35f6 protein_coding protein_coding MGP_WSBEiJ_T0069485.1 MGP_WSBEiJ_G0028582.1 mouse_genomes_project 5 28387795 28393152 + Slc35f6 protein_coding retained_intron MGP_WSBEiJ_T0069486.1 MGP_WSBEiJ_G0028582.1 mouse_genomes_project 5 28387809 28398076 + MGP_WSBEiJ_P0069486 Slc35f6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069487.1 MGP_WSBEiJ_G0028582.1 mouse_genomes_project 5 28387818 28395985 + Slc35f6 protein_coding retained_intron MGP_WSBEiJ_T0069488.1 MGP_WSBEiJ_G0028582.1 mouse_genomes_project 5 28387854 28398076 + MGP_WSBEiJ_P0069488 Slc35f6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069489.1 MGP_WSBEiJ_G0028582.1 mouse_genomes_project 5 28387864 28399622 + MGP_WSBEiJ_P0069489 Slc35f6 protein_coding protein_coding MGP_WSBEiJ_T0008123.1 MGP_WSBEiJ_G0006624.1 mouse_genomes_project 5 107414139 107415955 + Gm42916 lincRNA lincRNA MGP_WSBEiJ_T0001531.1 MGP_WSBEiJ_G0001455.1 mouse_genomes_project 5 47411951 47414396 - TEC TEC MGP_WSBEiJ_T0008004.1 MGP_WSBEiJ_G0006531.1 mouse_genomes_project 5 51015019 51026449 - 8030423F21Rik lincRNA lincRNA MGP_WSBEiJ_T0004717.1 MGP_WSBEiJ_G0004068.1 mouse_genomes_project 5 118408540 118438139 + Srrm4os antisense antisense MGP_WSBEiJ_T0004718.1 MGP_WSBEiJ_G0004068.1 mouse_genomes_project 5 118408540 118434750 + Srrm4os antisense antisense MGP_WSBEiJ_T0010550.1 MGP_WSBEiJ_G0008707.1 mouse_genomes_project 5 139148181 139148265 - Mir7034 miRNA miRNA MGP_WSBEiJ_T0069820.1 MGP_WSBEiJ_G0028629.1 mouse_genomes_project 5 30900572 30902753 + protein_coding retained_intron MGP_WSBEiJ_T0014430.1 MGP_WSBEiJ_G0012560.1 mouse_genomes_project 5 10883501 10884804 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008208.1 MGP_WSBEiJ_G0006679.1 mouse_genomes_project 5 121827394 121843015 + Gm16064 lincRNA lincRNA MGP_WSBEiJ_T0072519.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117547914 117634327 - MGP_WSBEiJ_P0072519 Ccdc64 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072520.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117547921 117549541 - Ccdc64 protein_coding retained_intron MGP_WSBEiJ_T0072521.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117547921 117634391 - MGP_WSBEiJ_P0072521 Ccdc64 protein_coding protein_coding MGP_WSBEiJ_T0072522.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117547923 117552733 - MGP_WSBEiJ_P0072522 Ccdc64 protein_coding protein_coding MGP_WSBEiJ_T0072523.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117547926 117552728 - MGP_WSBEiJ_P0072523 Ccdc64 protein_coding protein_coding MGP_WSBEiJ_T0072524.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117549013 117552733 - MGP_WSBEiJ_P0072524 Ccdc64 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072525.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117551565 117572011 - MGP_WSBEiJ_P0072525 Ccdc64 protein_coding protein_coding MGP_WSBEiJ_T0072526.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117559967 117572277 - Ccdc64 protein_coding retained_intron MGP_WSBEiJ_T0072527.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117568995 117619345 - Ccdc64 protein_coding processed_transcript MGP_WSBEiJ_T0072528.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117571931 117634137 - MGP_WSBEiJ_P0072528 Ccdc64 protein_coding protein_coding MGP_WSBEiJ_T0072529.1 MGP_WSBEiJ_G0029155.1 mouse_genomes_project 5 117627211 117634198 - Ccdc64 protein_coding retained_intron MGP_WSBEiJ_T0017621.1 MGP_WSBEiJ_G0015041.1 mouse_genomes_project 5 154484437 154492105 + Gm43451 processed_transcript lincRNA MGP_WSBEiJ_T0017622.1 MGP_WSBEiJ_G0015041.1 mouse_genomes_project 5 154491480 154492350 + Gm43451 processed_transcript retained_intron MGP_WSBEiJ_T0071259.1 MGP_WSBEiJ_G0028882.1 mouse_genomes_project 5 88003508 88014877 + MGP_WSBEiJ_P0071259 Odam protein_coding protein_coding MGP_WSBEiJ_T0071260.1 MGP_WSBEiJ_G0028882.1 mouse_genomes_project 5 88004174 88013453 + MGP_WSBEiJ_P0071260 Odam protein_coding protein_coding MGP_WSBEiJ_T0072667.1 MGP_WSBEiJ_G0029182.1 mouse_genomes_project 5 122713377 122720721 + MGP_WSBEiJ_P0072667 Sds protein_coding protein_coding MGP_WSBEiJ_T0072668.1 MGP_WSBEiJ_G0029182.1 mouse_genomes_project 5 122713382 122720721 + MGP_WSBEiJ_P0072668 Sds protein_coding protein_coding MGP_WSBEiJ_T0072669.1 MGP_WSBEiJ_G0029182.1 mouse_genomes_project 5 122715672 122717474 + MGP_WSBEiJ_P0072669 Sds protein_coding protein_coding MGP_WSBEiJ_T0072670.1 MGP_WSBEiJ_G0029182.1 mouse_genomes_project 5 122717149 122717672 + Sds protein_coding retained_intron MGP_WSBEiJ_T0001691.1 MGP_WSBEiJ_G0001613.1 mouse_genomes_project 5 102609476 102612034 + TEC TEC MGP_WSBEiJ_T0001547.1 MGP_WSBEiJ_G0001471.1 mouse_genomes_project 5 49870273 49873685 - TEC TEC MGP_WSBEiJ_T0099581.1 MGP_WSBEiJ_G0038244.1 mouse_genomes_project 5 16117415 16117543 + Gm23822 snoRNA snoRNA MGP_WSBEiJ_T0100096.1 MGP_WSBEiJ_G0038702.1 mouse_genomes_project 5 22212237 22215277 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100097.1 MGP_WSBEiJ_G0038702.1 mouse_genomes_project 5 22214100 22215151 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0008308.1 MGP_WSBEiJ_G0006745.1 mouse_genomes_project 5 151129082 151140751 + Gm43741 lincRNA lincRNA MGP_WSBEiJ_T0008351.1 MGP_WSBEiJ_G0006776.1 mouse_genomes_project 5 155919953 155926119 + Gm42904 lincRNA lincRNA MGP_WSBEiJ_T0010504.1 MGP_WSBEiJ_G0008661.1 mouse_genomes_project 5 32704990 32705110 - Mir467g miRNA miRNA MGP_WSBEiJ_T0073344.1 MGP_WSBEiJ_G0029296.1 mouse_genomes_project 5 131507954 131511201 + MGP_WSBEiJ_P0073344 Fzd10 protein_coding protein_coding MGP_WSBEiJ_T0010491.1 MGP_WSBEiJ_G0008648.1 mouse_genomes_project 5 1757297 1758630 - miRNA miRNA MGP_WSBEiJ_T0100873.1 MGP_WSBEiJ_G0039331.1 mouse_genomes_project 5 149125154 149127257 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011411.1 MGP_WSBEiJ_G0009568.1 mouse_genomes_project 5 120294777 120295067 - Gm24050 misc_RNA misc_RNA MGP_WSBEiJ_T0014714.1 MGP_WSBEiJ_G0012844.1 mouse_genomes_project 5 138367627 138367799 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007973.1 MGP_WSBEiJ_G0006507.1 mouse_genomes_project 5 35976161 35980309 + Gm20052 lincRNA lincRNA MGP_WSBEiJ_T0007974.1 MGP_WSBEiJ_G0006507.1 mouse_genomes_project 5 35976328 35977363 + Gm20052 lincRNA lincRNA MGP_WSBEiJ_T0007975.1 MGP_WSBEiJ_G0006507.1 mouse_genomes_project 5 35976739 35979191 + Gm20052 lincRNA lincRNA MGP_WSBEiJ_T0007976.1 MGP_WSBEiJ_G0006507.1 mouse_genomes_project 5 35977085 35979668 + Gm20052 lincRNA lincRNA MGP_WSBEiJ_T0007977.1 MGP_WSBEiJ_G0006507.1 mouse_genomes_project 5 35977096 35979529 + Gm20052 lincRNA lincRNA MGP_WSBEiJ_T0097062.1 MGP_WSBEiJ_G0035743.1 mouse_genomes_project 5 35144029 35144132 - Gm25551 rRNA rRNA MGP_WSBEiJ_T0070130.1 MGP_WSBEiJ_G0028676.1 mouse_genomes_project 5 34227013 34229560 + MGP_WSBEiJ_P0070130 Psapl1 protein_coding protein_coding MGP_WSBEiJ_T0008230.1 MGP_WSBEiJ_G0006691.1 mouse_genomes_project 5 126736918 126789805 + Gm34086 lincRNA lincRNA MGP_WSBEiJ_T0014650.1 MGP_WSBEiJ_G0012780.1 mouse_genomes_project 5 105639870 105640071 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014471.1 MGP_WSBEiJ_G0012601.1 mouse_genomes_project 5 22721089 22721655 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074134.1 MGP_WSBEiJ_G0029438.1 mouse_genomes_project 5 141818351 141833106 + MGP_WSBEiJ_P0074134 Nxpe5 protein_coding protein_coding MGP_WSBEiJ_T0074135.1 MGP_WSBEiJ_G0029438.1 mouse_genomes_project 5 141818357 141845011 + MGP_WSBEiJ_P0074135 Nxpe5 protein_coding protein_coding MGP_WSBEiJ_T0074136.1 MGP_WSBEiJ_G0029438.1 mouse_genomes_project 5 141818357 141845010 + MGP_WSBEiJ_P0074136 Nxpe5 protein_coding protein_coding MGP_WSBEiJ_T0074137.1 MGP_WSBEiJ_G0029438.1 mouse_genomes_project 5 141823299 141846505 + MGP_WSBEiJ_P0074137 Nxpe5 protein_coding protein_coding MGP_WSBEiJ_T0074138.1 MGP_WSBEiJ_G0029438.1 mouse_genomes_project 5 141823299 141845654 + MGP_WSBEiJ_P0074138 Nxpe5 protein_coding protein_coding MGP_WSBEiJ_T0070551.1 MGP_WSBEiJ_G0028751.1 mouse_genomes_project 5 62659613 62806143 + Nwd2 protein_coding retained_intron MGP_WSBEiJ_T0070552.1 MGP_WSBEiJ_G0028751.1 mouse_genomes_project 5 62659619 62826600 + MGP_WSBEiJ_P0070552 Nwd2 protein_coding protein_coding MGP_WSBEiJ_T0070553.1 MGP_WSBEiJ_G0028751.1 mouse_genomes_project 5 62659844 62815860 + MGP_WSBEiJ_P0070553 Nwd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070554.1 MGP_WSBEiJ_G0028751.1 mouse_genomes_project 5 62815674 62826600 + MGP_WSBEiJ_P0070554 Nwd2 protein_coding protein_coding MGP_WSBEiJ_T0069507.1 MGP_WSBEiJ_G0028585.1 mouse_genomes_project 5 28551328 28603724 + MGP_WSBEiJ_P0069507 Mapre3 protein_coding protein_coding MGP_WSBEiJ_T0069508.1 MGP_WSBEiJ_G0028585.1 mouse_genomes_project 5 28551420 28603677 + Mapre3 protein_coding retained_intron MGP_WSBEiJ_T0069509.1 MGP_WSBEiJ_G0028585.1 mouse_genomes_project 5 28551441 28603677 + MGP_WSBEiJ_P0069509 Mapre3 protein_coding protein_coding MGP_WSBEiJ_T0069510.1 MGP_WSBEiJ_G0028585.1 mouse_genomes_project 5 28551447 28600195 + Mapre3 protein_coding retained_intron MGP_WSBEiJ_T0069511.1 MGP_WSBEiJ_G0028585.1 mouse_genomes_project 5 28591445 28600976 + MGP_WSBEiJ_P0069511 Mapre3 protein_coding protein_coding MGP_WSBEiJ_T0069512.1 MGP_WSBEiJ_G0028585.1 mouse_genomes_project 5 28602139 28602873 + Mapre3 protein_coding retained_intron MGP_WSBEiJ_T0072685.1 MGP_WSBEiJ_G0029186.1 mouse_genomes_project 5 122841934 122862000 + MGP_WSBEiJ_P0072685 Iqcd protein_coding protein_coding MGP_WSBEiJ_T0072686.1 MGP_WSBEiJ_G0029186.1 mouse_genomes_project 5 122841941 122862004 + MGP_WSBEiJ_P0072686 Iqcd protein_coding protein_coding MGP_WSBEiJ_T0014760.1 MGP_WSBEiJ_G0012890.1 mouse_genomes_project 5 151708882 151709348 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010551.1 MGP_WSBEiJ_G0008708.1 mouse_genomes_project 5 139260132 139260210 - Gm23268 miRNA miRNA MGP_WSBEiJ_T0070885.1 MGP_WSBEiJ_G0028808.1 mouse_genomes_project 5 72264864 72329431 + MGP_WSBEiJ_P0070885 Slain2 protein_coding protein_coding MGP_WSBEiJ_T0070886.1 MGP_WSBEiJ_G0028808.1 mouse_genomes_project 5 72264929 72329413 + MGP_WSBEiJ_P0070886 Slain2 protein_coding protein_coding MGP_WSBEiJ_T0070887.1 MGP_WSBEiJ_G0028808.1 mouse_genomes_project 5 72264976 72269046 + Slain2 protein_coding retained_intron MGP_WSBEiJ_T0070888.1 MGP_WSBEiJ_G0028808.1 mouse_genomes_project 5 72265228 72306972 + MGP_WSBEiJ_P0070888 Slain2 protein_coding protein_coding MGP_WSBEiJ_T0070889.1 MGP_WSBEiJ_G0028808.1 mouse_genomes_project 5 72297382 72325304 + Slain2 protein_coding retained_intron MGP_WSBEiJ_T0001518.1 MGP_WSBEiJ_G0001443.1 mouse_genomes_project 5 46956773 46959258 - TEC TEC MGP_WSBEiJ_T0074264.1 MGP_WSBEiJ_G0029461.1 mouse_genomes_project 5 143168841 143173491 + MGP_WSBEiJ_P0074264 Gper1 protein_coding protein_coding MGP_WSBEiJ_T0074265.1 MGP_WSBEiJ_G0029461.1 mouse_genomes_project 5 143168970 143171580 + Gper1 protein_coding processed_transcript MGP_WSBEiJ_T0074473.1 MGP_WSBEiJ_G0029509.1 mouse_genomes_project 5 147609245 147612432 + MGP_WSBEiJ_P0074473 protein_coding protein_coding MGP_WSBEiJ_T0074474.1 MGP_WSBEiJ_G0029509.1 mouse_genomes_project 5 147609261 147611373 + protein_coding retained_intron MGP_WSBEiJ_T0074475.1 MGP_WSBEiJ_G0029509.1 mouse_genomes_project 5 147609539 147612427 + protein_coding processed_transcript MGP_WSBEiJ_T0071872.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108847377 108986709 - MGP_WSBEiJ_P0071872 Evi5 protein_coding protein_coding MGP_WSBEiJ_T0071873.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108849858 108914526 - Evi5 protein_coding retained_intron MGP_WSBEiJ_T0071874.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108866663 108904292 - Evi5 protein_coding retained_intron MGP_WSBEiJ_T0071875.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108891998 108980086 - MGP_WSBEiJ_P0071875 Evi5 protein_coding protein_coding MGP_WSBEiJ_T0071876.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108919321 108980086 - MGP_WSBEiJ_P0071876 Evi5 protein_coding protein_coding MGP_WSBEiJ_T0071877.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108920906 108922555 - Evi5 protein_coding retained_intron MGP_WSBEiJ_T0071878.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108921356 108986646 - Evi5 protein_coding processed_transcript MGP_WSBEiJ_T0071879.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108921356 108986661 - MGP_WSBEiJ_P0071879 Evi5 protein_coding protein_coding MGP_WSBEiJ_T0071880.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108925761 108944292 - Evi5 protein_coding retained_intron MGP_WSBEiJ_T0071881.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108925797 108979306 - MGP_WSBEiJ_P0071881 Evi5 protein_coding protein_coding MGP_WSBEiJ_T0071882.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108928620 108979817 - Evi5 protein_coding processed_transcript MGP_WSBEiJ_T0071884.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108958015 108986658 - Evi5 protein_coding processed_transcript MGP_WSBEiJ_T0071885.1 MGP_WSBEiJ_G0029030.1 mouse_genomes_project 5 108984229 108986654 - Evi5 protein_coding processed_transcript MGP_WSBEiJ_T0070635.1 MGP_WSBEiJ_G0028767.1 mouse_genomes_project 5 64512805 64580035 - MGP_WSBEiJ_P0070635 Gm43552 protein_coding protein_coding MGP_WSBEiJ_T0001837.1 MGP_WSBEiJ_G0001757.1 mouse_genomes_project 5 137822867 137824332 - TEC TEC MGP_WSBEiJ_T0008306.1 MGP_WSBEiJ_G0006743.1 mouse_genomes_project 5 150901641 150915148 - Gm34333 lincRNA lincRNA MGP_WSBEiJ_T0004738.1 MGP_WSBEiJ_G0004081.1 mouse_genomes_project 5 124202314 124214168 - Gm16552 antisense antisense MGP_WSBEiJ_T0001582.1 MGP_WSBEiJ_G0001506.1 mouse_genomes_project 5 62656685 62661406 - TEC TEC MGP_WSBEiJ_T0001583.1 MGP_WSBEiJ_G0001506.1 mouse_genomes_project 5 62660461 62660776 - TEC TEC MGP_WSBEiJ_T0070509.1 MGP_WSBEiJ_G0028742.1 mouse_genomes_project 5 51730880 51732391 + Smim20 protein_coding retained_intron MGP_WSBEiJ_T0070510.1 MGP_WSBEiJ_G0028742.1 mouse_genomes_project 5 51730935 51744158 + MGP_WSBEiJ_P0070510 Smim20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070511.1 MGP_WSBEiJ_G0028742.1 mouse_genomes_project 5 51730935 51744158 + MGP_WSBEiJ_P0070511 Smim20 protein_coding protein_coding MGP_WSBEiJ_T0070512.1 MGP_WSBEiJ_G0028742.1 mouse_genomes_project 5 51730974 51744158 + MGP_WSBEiJ_P0070512 Smim20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070513.1 MGP_WSBEiJ_G0028742.1 mouse_genomes_project 5 51730987 51733065 + Smim20 protein_coding retained_intron MGP_WSBEiJ_T0070514.1 MGP_WSBEiJ_G0028742.1 mouse_genomes_project 5 51742735 51743644 + Smim20 protein_coding retained_intron MGP_WSBEiJ_T0001581.1 MGP_WSBEiJ_G0001505.1 mouse_genomes_project 5 61613006 61616308 - TEC TEC MGP_WSBEiJ_T0071756.1 MGP_WSBEiJ_G0029003.1 mouse_genomes_project 5 105365240 105414397 + MGP_WSBEiJ_P0071756 Pkd2 protein_coding protein_coding MGP_WSBEiJ_T0071757.1 MGP_WSBEiJ_G0029003.1 mouse_genomes_project 5 105365360 105393220 + Pkd2 protein_coding processed_transcript MGP_WSBEiJ_T0071758.1 MGP_WSBEiJ_G0029003.1 mouse_genomes_project 5 105395670 105405029 + Pkd2 protein_coding retained_intron MGP_WSBEiJ_T0001401.1 MGP_WSBEiJ_G0001329.1 mouse_genomes_project 5 5257554 5259618 - TEC TEC MGP_WSBEiJ_T0073222.1 MGP_WSBEiJ_G0029272.1 mouse_genomes_project 5 127208496 127224664 - MGP_WSBEiJ_P0073222 Rilpl2 protein_coding protein_coding MGP_WSBEiJ_T0073223.1 MGP_WSBEiJ_G0029272.1 mouse_genomes_project 5 127221535 127224608 - Rilpl2 protein_coding retained_intron MGP_WSBEiJ_T0014449.1 MGP_WSBEiJ_G0012579.1 mouse_genomes_project 5 18624107 18624465 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001706.1 MGP_WSBEiJ_G0001628.1 mouse_genomes_project 5 108240449 108242528 - TEC TEC MGP_WSBEiJ_T0014605.1 MGP_WSBEiJ_G0012735.1 mouse_genomes_project 5 83176645 83177512 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073629.1 MGP_WSBEiJ_G0029342.1 mouse_genomes_project 5 138264851 138266129 - MGP_WSBEiJ_P0073629 Cldn13 protein_coding protein_coding MGP_WSBEiJ_T0001528.1 MGP_WSBEiJ_G0001452.1 mouse_genomes_project 5 47346814 47349358 - TEC TEC MGP_WSBEiJ_T0074073.1 MGP_WSBEiJ_G0029424.1 mouse_genomes_project 5 141450932 141452034 - protein_coding retained_intron MGP_WSBEiJ_T0074074.1 MGP_WSBEiJ_G0029424.1 mouse_genomes_project 5 141450932 141453763 - MGP_WSBEiJ_P0074074 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074075.1 MGP_WSBEiJ_G0029424.1 mouse_genomes_project 5 141450932 141456853 - MGP_WSBEiJ_P0074075 protein_coding protein_coding MGP_WSBEiJ_T0074076.1 MGP_WSBEiJ_G0029424.1 mouse_genomes_project 5 141450932 141456180 - MGP_WSBEiJ_P0074076 protein_coding protein_coding MGP_WSBEiJ_T0074078.1 MGP_WSBEiJ_G0029424.1 mouse_genomes_project 5 141450934 141456853 - MGP_WSBEiJ_P0074078 protein_coding protein_coding MGP_WSBEiJ_T0072297.1 MGP_WSBEiJ_G0029112.1 mouse_genomes_project 5 115847371 115856304 + MGP_WSBEiJ_P0072297 Ung protein_coding protein_coding MGP_WSBEiJ_T0072298.1 MGP_WSBEiJ_G0029112.1 mouse_genomes_project 5 115848214 115856308 + MGP_WSBEiJ_P0072298 Ung protein_coding protein_coding MGP_WSBEiJ_T0072299.1 MGP_WSBEiJ_G0029112.1 mouse_genomes_project 5 115848214 115855354 + MGP_WSBEiJ_P0072299 Ung protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072300.1 MGP_WSBEiJ_G0029112.1 mouse_genomes_project 5 115848992 115855279 + MGP_WSBEiJ_P0072300 Ung protein_coding protein_coding MGP_WSBEiJ_T0072301.1 MGP_WSBEiJ_G0029112.1 mouse_genomes_project 5 115849064 115852150 + Ung protein_coding retained_intron MGP_WSBEiJ_T0074037.1 MGP_WSBEiJ_G0029417.1 mouse_genomes_project 5 141227682 141266772 - MGP_WSBEiJ_P0074037 Agfg2 protein_coding protein_coding MGP_WSBEiJ_T0074038.1 MGP_WSBEiJ_G0029417.1 mouse_genomes_project 5 141227704 141266726 - MGP_WSBEiJ_P0074038 Agfg2 protein_coding protein_coding MGP_WSBEiJ_T0074039.1 MGP_WSBEiJ_G0029417.1 mouse_genomes_project 5 141227992 141238899 - Agfg2 protein_coding retained_intron MGP_WSBEiJ_T0074040.1 MGP_WSBEiJ_G0029417.1 mouse_genomes_project 5 141231010 141266772 - MGP_WSBEiJ_P0074040 Agfg2 protein_coding protein_coding MGP_WSBEiJ_T0074041.1 MGP_WSBEiJ_G0029417.1 mouse_genomes_project 5 141232771 141241462 - MGP_WSBEiJ_P0074041 Agfg2 protein_coding protein_coding MGP_WSBEiJ_T0074042.1 MGP_WSBEiJ_G0029417.1 mouse_genomes_project 5 141239955 141266739 - Agfg2 protein_coding retained_intron MGP_WSBEiJ_T0008132.1 MGP_WSBEiJ_G0006632.1 mouse_genomes_project 5 109520650 109521588 - Gm42518 lincRNA lincRNA MGP_WSBEiJ_T0014582.1 MGP_WSBEiJ_G0012712.1 mouse_genomes_project 5 71301650 71302418 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014548.1 MGP_WSBEiJ_G0012678.1 mouse_genomes_project 5 56168659 56169290 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004668.1 MGP_WSBEiJ_G0004033.1 mouse_genomes_project 5 100674347 100675439 + Gm17092 antisense antisense MGP_WSBEiJ_T0069500.1 MGP_WSBEiJ_G0028584.1 mouse_genomes_project 5 28451471 28536055 + MGP_WSBEiJ_P0069500 Dpysl5 protein_coding protein_coding MGP_WSBEiJ_T0069501.1 MGP_WSBEiJ_G0028584.1 mouse_genomes_project 5 28451802 28536049 + MGP_WSBEiJ_P0069501 Dpysl5 protein_coding protein_coding MGP_WSBEiJ_T0069502.1 MGP_WSBEiJ_G0028584.1 mouse_genomes_project 5 28451809 28487961 + MGP_WSBEiJ_P0069502 Dpysl5 protein_coding protein_coding MGP_WSBEiJ_T0069503.1 MGP_WSBEiJ_G0028584.1 mouse_genomes_project 5 28512830 28522046 + Dpysl5 protein_coding processed_transcript MGP_WSBEiJ_T0069504.1 MGP_WSBEiJ_G0028584.1 mouse_genomes_project 5 28523620 28532988 + Dpysl5 protein_coding retained_intron MGP_WSBEiJ_T0069505.1 MGP_WSBEiJ_G0028584.1 mouse_genomes_project 5 28528662 28533094 + Dpysl5 protein_coding retained_intron MGP_WSBEiJ_T0069506.1 MGP_WSBEiJ_G0028584.1 mouse_genomes_project 5 28530399 28533241 + Dpysl5 protein_coding retained_intron MGP_WSBEiJ_T0001452.1 MGP_WSBEiJ_G0001378.1 mouse_genomes_project 5 28970116 28974088 - TEC TEC MGP_WSBEiJ_T0004735.1 MGP_WSBEiJ_G0004078.1 mouse_genomes_project 5 123041056 123075573 + Gm43069 antisense antisense MGP_WSBEiJ_T0071274.1 MGP_WSBEiJ_G0028890.1 mouse_genomes_project 5 88482887 88500723 + MGP_WSBEiJ_P0071274 Gm7714 protein_coding protein_coding MGP_WSBEiJ_T0001704.1 MGP_WSBEiJ_G0001626.1 mouse_genomes_project 5 107711871 107714812 - TEC TEC MGP_WSBEiJ_T0071926.1 MGP_WSBEiJ_G0029039.1 mouse_genomes_project 5 109546177 109593987 + MGP_WSBEiJ_P0071926 Pde6b protein_coding protein_coding MGP_WSBEiJ_T0071927.1 MGP_WSBEiJ_G0029039.1 mouse_genomes_project 5 109546212 109593911 + Pde6b protein_coding retained_intron MGP_WSBEiJ_T0071928.1 MGP_WSBEiJ_G0029039.1 mouse_genomes_project 5 109592620 109594640 + Pde6b protein_coding retained_intron MGP_WSBEiJ_T0001588.1 MGP_WSBEiJ_G0001511.1 mouse_genomes_project 5 64385572 64386759 - TEC TEC MGP_WSBEiJ_T0072663.1 MGP_WSBEiJ_G0029180.1 mouse_genomes_project 5 122664809 122674234 + MGP_WSBEiJ_P0072663 Lhx5 protein_coding protein_coding MGP_WSBEiJ_T0071860.1 MGP_WSBEiJ_G0029028.1 mouse_genomes_project 5 108698170 108766806 + MGP_WSBEiJ_P0071860 Rpap2 protein_coding protein_coding MGP_WSBEiJ_T0071861.1 MGP_WSBEiJ_G0029028.1 mouse_genomes_project 5 108698191 108747703 + MGP_WSBEiJ_P0071861 Rpap2 protein_coding protein_coding MGP_WSBEiJ_T0071862.1 MGP_WSBEiJ_G0029028.1 mouse_genomes_project 5 108698194 108705369 + Rpap2 protein_coding processed_transcript MGP_WSBEiJ_T0071863.1 MGP_WSBEiJ_G0029028.1 mouse_genomes_project 5 108698247 108747703 + MGP_WSBEiJ_P0071863 Rpap2 protein_coding protein_coding MGP_WSBEiJ_T0071864.1 MGP_WSBEiJ_G0029028.1 mouse_genomes_project 5 108698261 108766810 + MGP_WSBEiJ_P0071864 Rpap2 protein_coding protein_coding MGP_WSBEiJ_T0071865.1 MGP_WSBEiJ_G0029028.1 mouse_genomes_project 5 108698434 108705197 + MGP_WSBEiJ_P0071865 Rpap2 protein_coding protein_coding MGP_WSBEiJ_T0071866.1 MGP_WSBEiJ_G0029028.1 mouse_genomes_project 5 108698455 108710228 + MGP_WSBEiJ_P0071866 Rpap2 protein_coding protein_coding MGP_WSBEiJ_T0073036.1 MGP_WSBEiJ_G0029245.1 mouse_genomes_project 5 125867861 125946495 + MGP_WSBEiJ_P0073036 Wdr66 protein_coding protein_coding MGP_WSBEiJ_T0073037.1 MGP_WSBEiJ_G0029245.1 mouse_genomes_project 5 125886799 125914416 + Wdr66 protein_coding retained_intron MGP_WSBEiJ_T0073038.1 MGP_WSBEiJ_G0029245.1 mouse_genomes_project 5 125886799 125910454 + MGP_WSBEiJ_P0073038 Wdr66 protein_coding protein_coding MGP_WSBEiJ_T0073039.1 MGP_WSBEiJ_G0029245.1 mouse_genomes_project 5 125888680 125914367 + Wdr66 protein_coding retained_intron MGP_WSBEiJ_T0073040.1 MGP_WSBEiJ_G0029245.1 mouse_genomes_project 5 125893390 125894844 + Wdr66 protein_coding retained_intron MGP_WSBEiJ_T0073041.1 MGP_WSBEiJ_G0029245.1 mouse_genomes_project 5 125906672 125946659 + MGP_WSBEiJ_P0073041 Wdr66 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073042.1 MGP_WSBEiJ_G0029245.1 mouse_genomes_project 5 125910540 125946495 + MGP_WSBEiJ_P0073042 Wdr66 protein_coding protein_coding MGP_WSBEiJ_T0073043.1 MGP_WSBEiJ_G0029245.1 mouse_genomes_project 5 125919139 125946514 + Wdr66 protein_coding retained_intron MGP_WSBEiJ_T0008163.1 MGP_WSBEiJ_G0006648.1 mouse_genomes_project 5 113767274 113784523 - Miat lincRNA lincRNA MGP_WSBEiJ_T0008164.1 MGP_WSBEiJ_G0006648.1 mouse_genomes_project 5 113767276 113784076 - Miat lincRNA lincRNA MGP_WSBEiJ_T0008166.1 MGP_WSBEiJ_G0006648.1 mouse_genomes_project 5 113775437 113783772 - Miat lincRNA lincRNA MGP_WSBEiJ_T0008167.1 MGP_WSBEiJ_G0006648.1 mouse_genomes_project 5 113775728 113784057 - Miat lincRNA lincRNA MGP_WSBEiJ_T0008168.1 MGP_WSBEiJ_G0006648.1 mouse_genomes_project 5 113775926 113783803 - Miat lincRNA lincRNA MGP_WSBEiJ_T0008169.1 MGP_WSBEiJ_G0006648.1 mouse_genomes_project 5 113783233 113783769 - Miat lincRNA lincRNA MGP_WSBEiJ_T0073798.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139537792 139570873 + MGP_WSBEiJ_P0073798 protein_coding protein_coding MGP_WSBEiJ_T0073799.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139537830 139570873 + protein_coding retained_intron MGP_WSBEiJ_T0073800.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139537874 139570868 + protein_coding retained_intron MGP_WSBEiJ_T0073801.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139537874 139568974 + protein_coding retained_intron MGP_WSBEiJ_T0073802.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139537875 139549206 + protein_coding retained_intron MGP_WSBEiJ_T0073803.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139537894 139570868 + protein_coding retained_intron MGP_WSBEiJ_T0073804.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139537908 139570873 + MGP_WSBEiJ_P0073804 protein_coding protein_coding MGP_WSBEiJ_T0073805.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139537965 139566525 + protein_coding retained_intron MGP_WSBEiJ_T0073806.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139538946 139547018 + protein_coding processed_transcript MGP_WSBEiJ_T0073807.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139546855 139548325 + protein_coding retained_intron MGP_WSBEiJ_T0073808.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139551356 139561309 + MGP_WSBEiJ_P0073808 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073809.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139562907 139565047 + MGP_WSBEiJ_P0073809 protein_coding protein_coding MGP_WSBEiJ_T0073810.1 MGP_WSBEiJ_G0029376.1 mouse_genomes_project 5 139569944 139570543 + protein_coding retained_intron MGP_WSBEiJ_T0070536.1 MGP_WSBEiJ_G0028747.1 mouse_genomes_project 5 56455669 56881594 + MGP_WSBEiJ_P0070536 Pcdh7 protein_coding protein_coding MGP_WSBEiJ_T0070537.1 MGP_WSBEiJ_G0028747.1 mouse_genomes_project 5 56455722 56467106 + MGP_WSBEiJ_P0070537 Pcdh7 protein_coding protein_coding MGP_WSBEiJ_T0070538.1 MGP_WSBEiJ_G0028747.1 mouse_genomes_project 5 56456801 56877712 + MGP_WSBEiJ_P0070538 Pcdh7 protein_coding protein_coding MGP_WSBEiJ_T0070539.1 MGP_WSBEiJ_G0028747.1 mouse_genomes_project 5 56457827 56657275 + MGP_WSBEiJ_P0070539 Pcdh7 protein_coding protein_coding MGP_WSBEiJ_T0070540.1 MGP_WSBEiJ_G0028747.1 mouse_genomes_project 5 56458866 56878158 + MGP_WSBEiJ_P0070540 Pcdh7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070541.1 MGP_WSBEiJ_G0028747.1 mouse_genomes_project 5 56459617 56654521 + MGP_WSBEiJ_P0070541 Pcdh7 protein_coding protein_coding MGP_WSBEiJ_T0070542.1 MGP_WSBEiJ_G0028747.1 mouse_genomes_project 5 56459913 56877815 + MGP_WSBEiJ_P0070542 Pcdh7 protein_coding protein_coding MGP_WSBEiJ_T0014658.1 MGP_WSBEiJ_G0012788.1 mouse_genomes_project 5 107799824 107800472 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069845.1 MGP_WSBEiJ_G0028634.1 mouse_genomes_project 5 31274817 31310123 + Uvssa protein_coding retained_intron MGP_WSBEiJ_T0069846.1 MGP_WSBEiJ_G0028634.1 mouse_genomes_project 5 31274964 31319324 + MGP_WSBEiJ_P0069846 Uvssa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069847.1 MGP_WSBEiJ_G0028634.1 mouse_genomes_project 5 31274964 31319324 + MGP_WSBEiJ_P0069847 Uvssa protein_coding protein_coding MGP_WSBEiJ_T0069848.1 MGP_WSBEiJ_G0028634.1 mouse_genomes_project 5 31275040 31319324 + MGP_WSBEiJ_P0069848 Uvssa protein_coding protein_coding MGP_WSBEiJ_T0070515.1 MGP_WSBEiJ_G0028743.1 mouse_genomes_project 5 51961972 52154548 + MGP_WSBEiJ_P0070515 protein_coding protein_coding MGP_WSBEiJ_T0070516.1 MGP_WSBEiJ_G0028743.1 mouse_genomes_project 5 52056744 52058613 + protein_coding retained_intron MGP_WSBEiJ_T0070517.1 MGP_WSBEiJ_G0028743.1 mouse_genomes_project 5 52095317 52160904 + MGP_WSBEiJ_P0070517 protein_coding unknown_likely_coding MGP_WSBEiJ_T0070518.1 MGP_WSBEiJ_G0028743.1 mouse_genomes_project 5 52126021 52150330 + protein_coding processed_transcript MGP_WSBEiJ_T0070519.1 MGP_WSBEiJ_G0028743.1 mouse_genomes_project 5 52143015 52146425 + protein_coding retained_intron MGP_WSBEiJ_T0070520.1 MGP_WSBEiJ_G0028743.1 mouse_genomes_project 5 52150088 52157971 + protein_coding retained_intron MGP_WSBEiJ_T0071188.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86809039 86842711 + MGP_WSBEiJ_P0071188 Ythdc1 protein_coding protein_coding MGP_WSBEiJ_T0071189.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86809051 86842716 + MGP_WSBEiJ_P0071189 Ythdc1 protein_coding protein_coding MGP_WSBEiJ_T0071190.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86809314 86842716 + MGP_WSBEiJ_P0071190 Ythdc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071191.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86809382 86834821 + MGP_WSBEiJ_P0071191 Ythdc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071192.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86809382 86842714 + MGP_WSBEiJ_P0071192 Ythdc1 protein_coding protein_coding MGP_WSBEiJ_T0071193.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86811223 86814505 + Ythdc1 protein_coding retained_intron MGP_WSBEiJ_T0071194.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86820416 86842716 + Ythdc1 protein_coding retained_intron MGP_WSBEiJ_T0071195.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86827938 86833087 + Ythdc1 protein_coding retained_intron MGP_WSBEiJ_T0071196.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86834071 86840481 + Ythdc1 protein_coding processed_transcript MGP_WSBEiJ_T0071197.1 MGP_WSBEiJ_G0028863.1 mouse_genomes_project 5 86836516 86842714 + Ythdc1 protein_coding retained_intron MGP_WSBEiJ_T0072321.1 MGP_WSBEiJ_G0029116.1 mouse_genomes_project 5 116111037 116128059 - MGP_WSBEiJ_P0072321 Kctd10 protein_coding protein_coding MGP_WSBEiJ_T0072322.1 MGP_WSBEiJ_G0029116.1 mouse_genomes_project 5 116111932 116128040 - MGP_WSBEiJ_P0072322 Kctd10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072323.1 MGP_WSBEiJ_G0029116.1 mouse_genomes_project 5 116113092 116128034 - MGP_WSBEiJ_P0072323 Kctd10 protein_coding protein_coding MGP_WSBEiJ_T0072324.1 MGP_WSBEiJ_G0029116.1 mouse_genomes_project 5 116113176 116119613 - Kctd10 protein_coding processed_transcript MGP_WSBEiJ_T0072325.1 MGP_WSBEiJ_G0029116.1 mouse_genomes_project 5 116114353 116116140 - Kctd10 protein_coding retained_intron MGP_WSBEiJ_T0072326.1 MGP_WSBEiJ_G0029116.1 mouse_genomes_project 5 116114373 116117678 - Kctd10 protein_coding retained_intron MGP_WSBEiJ_T0072327.1 MGP_WSBEiJ_G0029116.1 mouse_genomes_project 5 116114454 116116723 - Kctd10 protein_coding retained_intron MGP_WSBEiJ_T0001797.1 MGP_WSBEiJ_G0001718.1 mouse_genomes_project 5 132519752 132520690 - TEC TEC MGP_WSBEiJ_T0004743.1 MGP_WSBEiJ_G0004086.1 mouse_genomes_project 5 125594346 125603454 + A930024E05Rik antisense antisense MGP_WSBEiJ_T0069295.1 MGP_WSBEiJ_G0028540.1 mouse_genomes_project 5 22151990 22159525 + MGP_WSBEiJ_P0069295 Chpf2 protein_coding protein_coding MGP_WSBEiJ_T0069296.1 MGP_WSBEiJ_G0028540.1 mouse_genomes_project 5 22151991 22154302 + Chpf2 protein_coding processed_transcript MGP_WSBEiJ_T0069297.1 MGP_WSBEiJ_G0028540.1 mouse_genomes_project 5 22151999 22157613 + MGP_WSBEiJ_P0069297 Chpf2 protein_coding protein_coding MGP_WSBEiJ_T0069298.1 MGP_WSBEiJ_G0028540.1 mouse_genomes_project 5 22152021 22153498 + Chpf2 protein_coding processed_transcript MGP_WSBEiJ_T0069299.1 MGP_WSBEiJ_G0028540.1 mouse_genomes_project 5 22152074 22156349 + MGP_WSBEiJ_P0069299 Chpf2 protein_coding protein_coding MGP_WSBEiJ_T0069303.1 MGP_WSBEiJ_G0028540.1 mouse_genomes_project 5 22158616 22159686 + Chpf2 protein_coding processed_transcript MGP_WSBEiJ_T0001842.1 MGP_WSBEiJ_G0001762.1 mouse_genomes_project 5 139012765 139018172 - TEC TEC MGP_WSBEiJ_T0074333.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144534657 144578324 - MGP_WSBEiJ_P0074333 Iqce protein_coding protein_coding MGP_WSBEiJ_T0074334.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144536325 144539058 - Iqce protein_coding retained_intron MGP_WSBEiJ_T0074335.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144536325 144578211 - Iqce protein_coding retained_intron MGP_WSBEiJ_T0074336.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144538096 144578285 - MGP_WSBEiJ_P0074336 Iqce protein_coding protein_coding MGP_WSBEiJ_T0074337.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144538845 144558529 - MGP_WSBEiJ_P0074337 Iqce protein_coding protein_coding MGP_WSBEiJ_T0074338.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144538974 144542175 - Iqce protein_coding retained_intron MGP_WSBEiJ_T0074339.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144558068 144566056 - Iqce protein_coding retained_intron MGP_WSBEiJ_T0074340.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144558830 144578222 - Iqce protein_coding retained_intron MGP_WSBEiJ_T0074341.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144566052 144577915 - Iqce protein_coding processed_transcript MGP_WSBEiJ_T0074342.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144566057 144578324 - MGP_WSBEiJ_P0074342 Iqce protein_coding protein_coding MGP_WSBEiJ_T0074343.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144568795 144578246 - MGP_WSBEiJ_P0074343 Iqce protein_coding protein_coding MGP_WSBEiJ_T0074344.1 MGP_WSBEiJ_G0029480.1 mouse_genomes_project 5 144569193 144578240 - Iqce protein_coding retained_intron MGP_WSBEiJ_T0001455.1 MGP_WSBEiJ_G0001381.1 mouse_genomes_project 5 29509129 29509361 + TEC TEC MGP_WSBEiJ_T0011406.1 MGP_WSBEiJ_G0009563.1 mouse_genomes_project 5 112820562 112820722 - Gm27680 misc_RNA misc_RNA MGP_WSBEiJ_T0099603.1 MGP_WSBEiJ_G0038266.1 mouse_genomes_project 5 83530321 83530453 - Gm25765 snoRNA snoRNA MGP_WSBEiJ_T0074273.1 MGP_WSBEiJ_G0029464.1 mouse_genomes_project 5 143485974 143521534 - MGP_WSBEiJ_P0074273 Micall2 protein_coding protein_coding MGP_WSBEiJ_T0074274.1 MGP_WSBEiJ_G0029464.1 mouse_genomes_project 5 143486172 143490911 - Micall2 protein_coding retained_intron MGP_WSBEiJ_T0074275.1 MGP_WSBEiJ_G0029464.1 mouse_genomes_project 5 143490818 143492303 - MGP_WSBEiJ_P0074275 Micall2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014476.1 MGP_WSBEiJ_G0012606.1 mouse_genomes_project 5 23330886 23331247 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072176.1 MGP_WSBEiJ_G0029088.1 mouse_genomes_project 5 113949539 113958370 - MGP_WSBEiJ_P0072176 Asphd2 protein_coding protein_coding MGP_WSBEiJ_T0072177.1 MGP_WSBEiJ_G0029088.1 mouse_genomes_project 5 113950633 113955871 - Asphd2 protein_coding processed_transcript MGP_WSBEiJ_T0072178.1 MGP_WSBEiJ_G0029088.1 mouse_genomes_project 5 113957655 113960181 - MGP_WSBEiJ_P0072178 Asphd2 protein_coding protein_coding MGP_WSBEiJ_T0072179.1 MGP_WSBEiJ_G0029088.1 mouse_genomes_project 5 113957844 113961718 - MGP_WSBEiJ_P0072179 Asphd2 protein_coding protein_coding MGP_WSBEiJ_T0072180.1 MGP_WSBEiJ_G0029088.1 mouse_genomes_project 5 113957932 113960115 - MGP_WSBEiJ_P0072180 Asphd2 protein_coding protein_coding MGP_WSBEiJ_T0072181.1 MGP_WSBEiJ_G0029088.1 mouse_genomes_project 5 113957967 113960460 - MGP_WSBEiJ_P0072181 Asphd2 protein_coding protein_coding MGP_WSBEiJ_T0072182.1 MGP_WSBEiJ_G0029088.1 mouse_genomes_project 5 113958037 113960087 - MGP_WSBEiJ_P0072182 Asphd2 protein_coding protein_coding MGP_WSBEiJ_T0001465.1 MGP_WSBEiJ_G0001390.1 mouse_genomes_project 5 31568853 31570008 + TEC TEC MGP_WSBEiJ_T0071759.1 MGP_WSBEiJ_G0029004.1 mouse_genomes_project 5 105416926 105431181 + MGP_WSBEiJ_P0071759 BC005561 protein_coding protein_coding MGP_WSBEiJ_T0001522.1 MGP_WSBEiJ_G0001447.1 mouse_genomes_project 5 47178883 47181555 - TEC TEC MGP_WSBEiJ_T0007998.1 MGP_WSBEiJ_G0006525.1 mouse_genomes_project 5 43440664 43491906 - Gm43303 lincRNA lincRNA MGP_WSBEiJ_T0071597.1 MGP_WSBEiJ_G0028971.1 mouse_genomes_project 5 100740527 100771774 + MGP_WSBEiJ_P0071597 Enoph1 protein_coding protein_coding MGP_WSBEiJ_T0071598.1 MGP_WSBEiJ_G0028971.1 mouse_genomes_project 5 100740586 100771774 + MGP_WSBEiJ_P0071598 Enoph1 protein_coding protein_coding MGP_WSBEiJ_T0071599.1 MGP_WSBEiJ_G0028971.1 mouse_genomes_project 5 100740610 100764355 + Enoph1 protein_coding retained_intron MGP_WSBEiJ_T0071600.1 MGP_WSBEiJ_G0028971.1 mouse_genomes_project 5 100764969 100767194 + Enoph1 protein_coding processed_transcript MGP_WSBEiJ_T0014666.1 MGP_WSBEiJ_G0012796.1 mouse_genomes_project 5 109299320 109299905 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014496.1 MGP_WSBEiJ_G0012626.1 mouse_genomes_project 5 30145931 30146120 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014489.1 MGP_WSBEiJ_G0012619.1 mouse_genomes_project 5 27444991 27445370 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001609.1 MGP_WSBEiJ_G0001532.1 mouse_genomes_project 5 65497634 65499685 - TEC TEC MGP_WSBEiJ_T0008083.1 MGP_WSBEiJ_G0006597.1 mouse_genomes_project 5 97967562 98226324 + 4930467D21Rik lincRNA lincRNA MGP_WSBEiJ_T0008084.1 MGP_WSBEiJ_G0006597.1 mouse_genomes_project 5 97967592 98172071 + 4930467D21Rik lincRNA lincRNA MGP_WSBEiJ_T0069539.1 MGP_WSBEiJ_G0028589.1 mouse_genomes_project 5 28652121 28660001 + MGP_WSBEiJ_P0069539 Emilin1 protein_coding protein_coding MGP_WSBEiJ_T0069540.1 MGP_WSBEiJ_G0028589.1 mouse_genomes_project 5 28652458 28659590 + Emilin1 protein_coding retained_intron MGP_WSBEiJ_T0069541.1 MGP_WSBEiJ_G0028589.1 mouse_genomes_project 5 28658645 28659774 + Emilin1 protein_coding retained_intron MGP_WSBEiJ_T0069009.1 MGP_WSBEiJ_G0028487.1 mouse_genomes_project 5 9348982 9557247 + MGP_WSBEiJ_P0069009 Sema3d protein_coding protein_coding MGP_WSBEiJ_T0069010.1 MGP_WSBEiJ_G0028487.1 mouse_genomes_project 5 9349103 9525703 + Sema3d protein_coding processed_transcript MGP_WSBEiJ_T0069011.1 MGP_WSBEiJ_G0028487.1 mouse_genomes_project 5 9349103 9547487 + MGP_WSBEiJ_P0069011 Sema3d protein_coding protein_coding MGP_WSBEiJ_T0069012.1 MGP_WSBEiJ_G0028487.1 mouse_genomes_project 5 9460042 9484313 + Sema3d protein_coding processed_transcript MGP_WSBEiJ_T0069013.1 MGP_WSBEiJ_G0028487.1 mouse_genomes_project 5 9544440 9557051 + Sema3d protein_coding processed_transcript MGP_WSBEiJ_T0071745.1 MGP_WSBEiJ_G0028998.1 mouse_genomes_project 5 105063304 105072688 + MGP_WSBEiJ_P0071745 Dspp protein_coding protein_coding MGP_WSBEiJ_T0004768.1 MGP_WSBEiJ_G0004102.1 mouse_genomes_project 5 135026513 135030112 + 4930563F08Rik antisense antisense MGP_WSBEiJ_T0001828.1 MGP_WSBEiJ_G0001749.1 mouse_genomes_project 5 135651730 135653890 - TEC TEC MGP_WSBEiJ_T0070391.1 MGP_WSBEiJ_G0028725.1 mouse_genomes_project 5 43913996 43944643 + MGP_WSBEiJ_P0070391 Ncapg protein_coding protein_coding MGP_WSBEiJ_T0070392.1 MGP_WSBEiJ_G0028725.1 mouse_genomes_project 5 43920019 43944222 + Ncapg protein_coding retained_intron MGP_WSBEiJ_T0070393.1 MGP_WSBEiJ_G0028725.1 mouse_genomes_project 5 43921870 43924013 + Ncapg protein_coding retained_intron MGP_WSBEiJ_T0070394.1 MGP_WSBEiJ_G0028725.1 mouse_genomes_project 5 43921921 43944168 + Ncapg protein_coding retained_intron MGP_WSBEiJ_T0070395.1 MGP_WSBEiJ_G0028725.1 mouse_genomes_project 5 43936102 43941017 + Ncapg protein_coding retained_intron MGP_WSBEiJ_T0070398.1 MGP_WSBEiJ_G0028725.1 mouse_genomes_project 5 43942754 43944165 + Ncapg protein_coding retained_intron MGP_WSBEiJ_T0100867.1 MGP_WSBEiJ_G0039325.1 mouse_genomes_project 5 128630871 128631536 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0074266.1 MGP_WSBEiJ_G0029462.1 mouse_genomes_project 5 143222574 143235874 - MGP_WSBEiJ_P0074266 Zfand2a protein_coding protein_coding MGP_WSBEiJ_T0074267.1 MGP_WSBEiJ_G0029462.1 mouse_genomes_project 5 143222579 143235842 - MGP_WSBEiJ_P0074267 Zfand2a protein_coding protein_coding MGP_WSBEiJ_T0074268.1 MGP_WSBEiJ_G0029462.1 mouse_genomes_project 5 143226263 143230304 - Zfand2a protein_coding processed_transcript MGP_WSBEiJ_T0074269.1 MGP_WSBEiJ_G0029462.1 mouse_genomes_project 5 143229842 143235789 - MGP_WSBEiJ_P0074269 Zfand2a protein_coding protein_coding MGP_WSBEiJ_T0074270.1 MGP_WSBEiJ_G0029462.1 mouse_genomes_project 5 143230437 143235753 - Zfand2a protein_coding processed_transcript MGP_WSBEiJ_T0071478.1 MGP_WSBEiJ_G0028943.1 mouse_genomes_project 5 93013113 93018386 - Ccdc158 protein_coding retained_intron MGP_WSBEiJ_T0071479.1 MGP_WSBEiJ_G0028943.1 mouse_genomes_project 5 93013412 93077153 - MGP_WSBEiJ_P0071479 Ccdc158 protein_coding protein_coding MGP_WSBEiJ_T0071480.1 MGP_WSBEiJ_G0028943.1 mouse_genomes_project 5 93054124 93077293 - MGP_WSBEiJ_P0071480 Ccdc158 protein_coding protein_coding MGP_WSBEiJ_T0071481.1 MGP_WSBEiJ_G0028943.1 mouse_genomes_project 5 93054124 93077299 - MGP_WSBEiJ_P0071481 Ccdc158 protein_coding protein_coding MGP_WSBEiJ_T0014458.1 MGP_WSBEiJ_G0012588.1 mouse_genomes_project 5 20062344 20063396 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014609.1 MGP_WSBEiJ_G0012739.1 mouse_genomes_project 5 86966831 86968424 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001500.1 MGP_WSBEiJ_G0001425.1 mouse_genomes_project 5 42852766 42856549 - TEC TEC MGP_WSBEiJ_T0072714.1 MGP_WSBEiJ_G0029193.1 mouse_genomes_project 5 123015625 123040922 - MGP_WSBEiJ_P0072714 Oas3 protein_coding protein_coding MGP_WSBEiJ_T0072715.1 MGP_WSBEiJ_G0029193.1 mouse_genomes_project 5 123016743 123018787 - MGP_WSBEiJ_P0072715 Oas3 protein_coding protein_coding MGP_WSBEiJ_T0072716.1 MGP_WSBEiJ_G0029193.1 mouse_genomes_project 5 123017928 123020183 - Oas3 protein_coding retained_intron MGP_WSBEiJ_T0072717.1 MGP_WSBEiJ_G0029193.1 mouse_genomes_project 5 123027215 123040901 - Oas3 protein_coding retained_intron MGP_WSBEiJ_T0074878.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155696556 155852581 - MGP_WSBEiJ_P0074878 Stard13 protein_coding protein_coding MGP_WSBEiJ_T0074879.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155698579 155852481 - MGP_WSBEiJ_P0074879 Stard13 protein_coding protein_coding MGP_WSBEiJ_T0074880.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155722357 155852587 - Stard13 protein_coding processed_transcript MGP_WSBEiJ_T0074881.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155722458 155749079 - Stard13 protein_coding processed_transcript MGP_WSBEiJ_T0074883.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155722461 155901446 - MGP_WSBEiJ_P0074883 Stard13 protein_coding protein_coding MGP_WSBEiJ_T0074884.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155722508 155756172 - Stard13 protein_coding processed_transcript MGP_WSBEiJ_T0074885.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155731088 155852537 - Stard13 protein_coding retained_intron MGP_WSBEiJ_T0074886.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155733128 155901508 - MGP_WSBEiJ_P0074886 Stard13 protein_coding protein_coding MGP_WSBEiJ_T0074887.1 MGP_WSBEiJ_G0029590.1 mouse_genomes_project 5 155755845 155769155 - Stard13 protein_coding processed_transcript MGP_WSBEiJ_T0073723.1 MGP_WSBEiJ_G0029361.1 mouse_genomes_project 5 138956612 138960387 - MGP_WSBEiJ_P0073723 Ccl26 protein_coding protein_coding MGP_WSBEiJ_T0014670.1 MGP_WSBEiJ_G0012800.1 mouse_genomes_project 5 110171562 110171936 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071996.1 MGP_WSBEiJ_G0029055.1 mouse_genomes_project 5 110885251 110889820 - MGP_WSBEiJ_P0071996 Crlf2 protein_coding protein_coding MGP_WSBEiJ_T0071997.1 MGP_WSBEiJ_G0029055.1 mouse_genomes_project 5 110885255 110889882 - MGP_WSBEiJ_P0071997 Crlf2 protein_coding protein_coding MGP_WSBEiJ_T0071998.1 MGP_WSBEiJ_G0029055.1 mouse_genomes_project 5 110885257 110887382 - MGP_WSBEiJ_P0071998 Crlf2 protein_coding protein_coding MGP_WSBEiJ_T0100865.1 MGP_WSBEiJ_G0039323.1 mouse_genomes_project 5 110882485 110884700 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0071202.1 MGP_WSBEiJ_G0028867.1 mouse_genomes_project 5 87073717 87100687 - MGP_WSBEiJ_P0071202 Ugt2b36 protein_coding protein_coding MGP_WSBEiJ_T0071203.1 MGP_WSBEiJ_G0028867.1 mouse_genomes_project 5 87074231 87456404 - MGP_WSBEiJ_P0071203 Ugt2b36 protein_coding protein_coding MGP_WSBEiJ_T0071204.1 MGP_WSBEiJ_G0028867.1 mouse_genomes_project 5 87074234 87454379 - Ugt2b36 protein_coding retained_intron MGP_WSBEiJ_T0071205.1 MGP_WSBEiJ_G0028867.1 mouse_genomes_project 5 87089025 87456402 - MGP_WSBEiJ_P0071205 Ugt2b36 protein_coding protein_coding MGP_WSBEiJ_T0072078.1 MGP_WSBEiJ_G0029069.1 mouse_genomes_project 5 111997811 112076034 + MGP_WSBEiJ_P0072078 Galnt9 protein_coding protein_coding MGP_WSBEiJ_T0072079.1 MGP_WSBEiJ_G0029069.1 mouse_genomes_project 5 112057039 112076036 + MGP_WSBEiJ_P0072079 Galnt9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072080.1 MGP_WSBEiJ_G0029069.1 mouse_genomes_project 5 112057040 112076039 + MGP_WSBEiJ_P0072080 Galnt9 protein_coding protein_coding MGP_WSBEiJ_T0001746.1 MGP_WSBEiJ_G0001668.1 mouse_genomes_project 5 120672418 120673763 - TEC TEC MGP_WSBEiJ_T0014428.1 MGP_WSBEiJ_G0012558.1 mouse_genomes_project 5 7717085 7717341 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001554.1 MGP_WSBEiJ_G0001478.1 mouse_genomes_project 5 50554964 50556350 - TEC TEC MGP_WSBEiJ_T0008023.1 MGP_WSBEiJ_G0006546.1 mouse_genomes_project 5 63666947 63668864 - Gm42564 lincRNA lincRNA MGP_WSBEiJ_T0014509.1 MGP_WSBEiJ_G0012639.1 mouse_genomes_project 5 32448215 32448824 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001670.1 MGP_WSBEiJ_G0001592.1 mouse_genomes_project 5 91131630 91134763 + TEC TEC MGP_WSBEiJ_T0004818.1 MGP_WSBEiJ_G0004139.1 mouse_genomes_project 5 155188385 155195474 - Gm42529 antisense antisense MGP_WSBEiJ_T0073241.1 MGP_WSBEiJ_G0029277.1 mouse_genomes_project 5 127320485 127330033 - MGP_WSBEiJ_P0073241 Eif2b1 protein_coding protein_coding MGP_WSBEiJ_T0073242.1 MGP_WSBEiJ_G0029277.1 mouse_genomes_project 5 127322026 127325192 - Eif2b1 protein_coding retained_intron MGP_WSBEiJ_T0073243.1 MGP_WSBEiJ_G0029277.1 mouse_genomes_project 5 127323356 127329963 - MGP_WSBEiJ_P0073243 Eif2b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073244.1 MGP_WSBEiJ_G0029277.1 mouse_genomes_project 5 127324006 127329977 - MGP_WSBEiJ_P0073244 Eif2b1 protein_coding protein_coding MGP_WSBEiJ_T0073245.1 MGP_WSBEiJ_G0029277.1 mouse_genomes_project 5 127327087 127329894 - MGP_WSBEiJ_P0073245 Eif2b1 protein_coding protein_coding MGP_WSBEiJ_T0073246.1 MGP_WSBEiJ_G0029277.1 mouse_genomes_project 5 127329421 127329934 - MGP_WSBEiJ_P0073246 Eif2b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004557.1 MGP_WSBEiJ_G0003947.1 mouse_genomes_project 5 11795897 11827413 - Gm26954 antisense antisense MGP_WSBEiJ_T0004558.1 MGP_WSBEiJ_G0003947.1 mouse_genomes_project 5 11816733 11827398 - Gm26954 antisense antisense MGP_WSBEiJ_T0001682.1 MGP_WSBEiJ_G0001604.1 mouse_genomes_project 5 97499563 97500048 + TEC TEC MGP_WSBEiJ_T0014450.1 MGP_WSBEiJ_G0012580.1 mouse_genomes_project 5 18982827 18983328 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073519.1 MGP_WSBEiJ_G0029329.1 mouse_genomes_project 5 137396204 137432470 - MGP_WSBEiJ_P0073519 Wbscr16 protein_coding protein_coding MGP_WSBEiJ_T0073520.1 MGP_WSBEiJ_G0029329.1 mouse_genomes_project 5 137405200 137425070 - Wbscr16 protein_coding retained_intron MGP_WSBEiJ_T0073521.1 MGP_WSBEiJ_G0029329.1 mouse_genomes_project 5 137418823 137422994 - Wbscr16 protein_coding retained_intron MGP_WSBEiJ_T0071433.1 MGP_WSBEiJ_G0028936.1 mouse_genomes_project 5 92721670 92728348 - MGP_WSBEiJ_P0071433 Cxcl9 protein_coding protein_coding MGP_WSBEiJ_T0071434.1 MGP_WSBEiJ_G0028936.1 mouse_genomes_project 5 92726888 92728347 - Cxcl9 protein_coding retained_intron MGP_WSBEiJ_T0069319.1 MGP_WSBEiJ_G0028545.1 mouse_genomes_project 5 22375518 22417891 - MGP_WSBEiJ_P0069319 Rheb protein_coding protein_coding MGP_WSBEiJ_T0069320.1 MGP_WSBEiJ_G0028545.1 mouse_genomes_project 5 22376362 22386532 - Rheb protein_coding retained_intron MGP_WSBEiJ_T0069321.1 MGP_WSBEiJ_G0028545.1 mouse_genomes_project 5 22382709 22417695 - Rheb protein_coding retained_intron MGP_WSBEiJ_T0069322.1 MGP_WSBEiJ_G0028545.1 mouse_genomes_project 5 22415266 22417876 - Rheb protein_coding retained_intron MGP_WSBEiJ_T0007956.1 MGP_WSBEiJ_G0006497.1 mouse_genomes_project 5 30228592 30236494 - Gm7596 lincRNA lincRNA MGP_WSBEiJ_T0007957.1 MGP_WSBEiJ_G0006497.1 mouse_genomes_project 5 30228618 30231890 - Gm7596 lincRNA lincRNA MGP_WSBEiJ_T0010497.1 MGP_WSBEiJ_G0008654.1 mouse_genomes_project 5 22157242 22157340 + Mir671 miRNA miRNA MGP_WSBEiJ_T0070472.1 MGP_WSBEiJ_G0028736.1 mouse_genomes_project 5 51050469 51081789 - MGP_WSBEiJ_P0070472 Sepsecs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070473.1 MGP_WSBEiJ_G0028736.1 mouse_genomes_project 5 51050469 51081789 - MGP_WSBEiJ_P0070473 Sepsecs protein_coding protein_coding MGP_WSBEiJ_T0070474.1 MGP_WSBEiJ_G0028736.1 mouse_genomes_project 5 51051558 51077232 - MGP_WSBEiJ_P0070474 Sepsecs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070475.1 MGP_WSBEiJ_G0028736.1 mouse_genomes_project 5 51057007 51058850 - Sepsecs protein_coding retained_intron MGP_WSBEiJ_T0070476.1 MGP_WSBEiJ_G0028736.1 mouse_genomes_project 5 51067587 51081694 - MGP_WSBEiJ_P0070476 Sepsecs protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073461.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133208668 133256667 + MGP_WSBEiJ_P0073461 Rabgef1 protein_coding protein_coding MGP_WSBEiJ_T0073462.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133208694 133252767 + MGP_WSBEiJ_P0073462 Rabgef1 protein_coding protein_coding MGP_WSBEiJ_T0073463.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133228698 133251077 + MGP_WSBEiJ_P0073463 Rabgef1 protein_coding protein_coding MGP_WSBEiJ_T0073464.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133228698 133256662 + MGP_WSBEiJ_P0073464 Rabgef1 protein_coding protein_coding MGP_WSBEiJ_T0073465.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133228745 133249511 + Rabgef1 protein_coding processed_transcript MGP_WSBEiJ_T0073466.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133228757 133232850 + Rabgef1 protein_coding retained_intron MGP_WSBEiJ_T0073467.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133249473 133253316 + Rabgef1 protein_coding retained_intron MGP_WSBEiJ_T0073468.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133253705 133255300 + Rabgef1 protein_coding retained_intron MGP_WSBEiJ_T0073469.1 MGP_WSBEiJ_G0029319.1 mouse_genomes_project 5 133255490 133256375 + MGP_WSBEiJ_P0073469 Rabgef1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074639.1 MGP_WSBEiJ_G0029548.1 mouse_genomes_project 5 150475555 150477082 - MGP_WSBEiJ_P0074639 protein_coding protein_coding MGP_WSBEiJ_T0070215.1 MGP_WSBEiJ_G0028693.1 mouse_genomes_project 5 35898473 35902549 - MGP_WSBEiJ_P0070215 Msx1 protein_coding protein_coding MGP_WSBEiJ_T0070216.1 MGP_WSBEiJ_G0028693.1 mouse_genomes_project 5 35900689 35902548 - Msx1 protein_coding retained_intron MGP_WSBEiJ_T0073312.1 MGP_WSBEiJ_G0029289.1 mouse_genomes_project 5 128208340 128230281 + MGP_WSBEiJ_P0073312 Bri3bp protein_coding protein_coding MGP_WSBEiJ_T0073313.1 MGP_WSBEiJ_G0029289.1 mouse_genomes_project 5 128208522 128224637 + MGP_WSBEiJ_P0073313 Bri3bp protein_coding protein_coding MGP_WSBEiJ_T0072150.1 MGP_WSBEiJ_G0029083.1 mouse_genomes_project 5 113833233 113875944 + MGP_WSBEiJ_P0072150 Tpst2 protein_coding protein_coding MGP_WSBEiJ_T0072151.1 MGP_WSBEiJ_G0029083.1 mouse_genomes_project 5 113833246 113869683 + Tpst2 protein_coding retained_intron MGP_WSBEiJ_T0072152.1 MGP_WSBEiJ_G0029083.1 mouse_genomes_project 5 113833249 113875938 + MGP_WSBEiJ_P0072152 Tpst2 protein_coding protein_coding MGP_WSBEiJ_T0072153.1 MGP_WSBEiJ_G0029083.1 mouse_genomes_project 5 113847455 113868383 + MGP_WSBEiJ_P0072153 Tpst2 protein_coding protein_coding MGP_WSBEiJ_T0072154.1 MGP_WSBEiJ_G0029083.1 mouse_genomes_project 5 113864042 113875540 + MGP_WSBEiJ_P0072154 Tpst2 protein_coding protein_coding MGP_WSBEiJ_T0072155.1 MGP_WSBEiJ_G0029083.1 mouse_genomes_project 5 113868937 113870463 + MGP_WSBEiJ_P0072155 Tpst2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072156.1 MGP_WSBEiJ_G0029083.1 mouse_genomes_project 5 113873478 113875547 + Tpst2 protein_coding retained_intron MGP_WSBEiJ_T0001577.1 MGP_WSBEiJ_G0001501.1 mouse_genomes_project 5 56925144 56926940 - TEC TEC MGP_WSBEiJ_T0010532.1 MGP_WSBEiJ_G0008689.1 mouse_genomes_project 5 112488044 112488153 + Mir701 miRNA miRNA MGP_WSBEiJ_T0001447.1 MGP_WSBEiJ_G0001374.1 mouse_genomes_project 5 27696584 27700579 - TEC TEC MGP_WSBEiJ_T0001796.1 MGP_WSBEiJ_G0001717.1 mouse_genomes_project 5 131643944 131644618 - TEC TEC MGP_WSBEiJ_T0001509.1 MGP_WSBEiJ_G0001434.1 mouse_genomes_project 5 44017817 44019975 - TEC TEC MGP_WSBEiJ_T0071272.1 MGP_WSBEiJ_G0028888.1 mouse_genomes_project 5 88232054 88277761 + MGP_WSBEiJ_P0071272 Smr2 protein_coding protein_coding MGP_WSBEiJ_T0014597.1 MGP_WSBEiJ_G0012727.1 mouse_genomes_project 5 76815068 76815635 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001635.1 MGP_WSBEiJ_G0001558.1 mouse_genomes_project 5 68533863 68535721 - TEC TEC MGP_WSBEiJ_T0008298.1 MGP_WSBEiJ_G0006737.1 mouse_genomes_project 5 147375799 147376600 + Gm43397 lincRNA lincRNA MGP_WSBEiJ_T0074564.1 MGP_WSBEiJ_G0029529.1 mouse_genomes_project 5 149097927 149132454 - MGP_WSBEiJ_P0074564 Kpna7 protein_coding protein_coding MGP_WSBEiJ_T0074565.1 MGP_WSBEiJ_G0029529.1 mouse_genomes_project 5 149098136 149131441 - MGP_WSBEiJ_P0074565 Kpna7 protein_coding protein_coding MGP_WSBEiJ_T0074566.1 MGP_WSBEiJ_G0029529.1 mouse_genomes_project 5 149100098 149127257 - MGP_WSBEiJ_P0074566 Kpna7 protein_coding protein_coding MGP_WSBEiJ_T0074567.1 MGP_WSBEiJ_G0029529.1 mouse_genomes_project 5 149108341 149122638 - Kpna7 protein_coding processed_transcript MGP_WSBEiJ_T0074568.1 MGP_WSBEiJ_G0029529.1 mouse_genomes_project 5 149119169 149131206 - MGP_WSBEiJ_P0074568 Kpna7 protein_coding protein_coding MGP_WSBEiJ_T0074569.1 MGP_WSBEiJ_G0029529.1 mouse_genomes_project 5 149125236 149222262 - MGP_WSBEiJ_P0074569 Kpna7 protein_coding protein_coding MGP_WSBEiJ_T0070357.1 MGP_WSBEiJ_G0028718.1 mouse_genomes_project 5 42384364 42436763 - MGP_WSBEiJ_P0070357 Tapt1 protein_coding protein_coding MGP_WSBEiJ_T0070358.1 MGP_WSBEiJ_G0028718.1 mouse_genomes_project 5 42384369 42436758 - MGP_WSBEiJ_P0070358 Tapt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070359.1 MGP_WSBEiJ_G0028718.1 mouse_genomes_project 5 42385707 42392037 - Tapt1 protein_coding retained_intron MGP_WSBEiJ_T0070360.1 MGP_WSBEiJ_G0028718.1 mouse_genomes_project 5 42393443 42401325 - Tapt1 protein_coding retained_intron MGP_WSBEiJ_T0070361.1 MGP_WSBEiJ_G0028718.1 mouse_genomes_project 5 42397892 42428366 - MGP_WSBEiJ_P0070361 Tapt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070362.1 MGP_WSBEiJ_G0028718.1 mouse_genomes_project 5 42397907 42414476 - Tapt1 protein_coding retained_intron MGP_WSBEiJ_T0070363.1 MGP_WSBEiJ_G0028718.1 mouse_genomes_project 5 42401651 42414646 - Tapt1 protein_coding retained_intron MGP_WSBEiJ_T0070364.1 MGP_WSBEiJ_G0028718.1 mouse_genomes_project 5 42427987 42436767 - Tapt1 protein_coding retained_intron MGP_WSBEiJ_T0014729.1 MGP_WSBEiJ_G0012859.1 mouse_genomes_project 5 142203133 142203991 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097405.1 MGP_WSBEiJ_G0036079.1 mouse_genomes_project 5 2230158 2232789 - Gm43727 sense_intronic sense_intronic MGP_WSBEiJ_T0074248.1 MGP_WSBEiJ_G0029457.1 mouse_genomes_project 5 143093545 143097702 + Cyp2w1 protein_coding retained_intron MGP_WSBEiJ_T0074249.1 MGP_WSBEiJ_G0029457.1 mouse_genomes_project 5 143093545 143100113 + MGP_WSBEiJ_P0074249 Cyp2w1 protein_coding protein_coding MGP_WSBEiJ_T0074250.1 MGP_WSBEiJ_G0029457.1 mouse_genomes_project 5 143097655 143099747 + MGP_WSBEiJ_P0074250 Cyp2w1 protein_coding protein_coding MGP_WSBEiJ_T0017623.1 MGP_WSBEiJ_G0015042.1 mouse_genomes_project 5 156038396 156051908 + processed_transcript retained_intron MGP_WSBEiJ_T0017624.1 MGP_WSBEiJ_G0015042.1 mouse_genomes_project 5 156038430 156065887 + processed_transcript lincRNA MGP_WSBEiJ_T0017625.1 MGP_WSBEiJ_G0015042.1 mouse_genomes_project 5 156038439 156084870 + processed_transcript lincRNA MGP_WSBEiJ_T0017626.1 MGP_WSBEiJ_G0015042.1 mouse_genomes_project 5 156070833 156084663 + processed_transcript lincRNA MGP_WSBEiJ_T0017627.1 MGP_WSBEiJ_G0015042.1 mouse_genomes_project 5 156077193 156103958 + processed_transcript lincRNA MGP_WSBEiJ_T0017628.1 MGP_WSBEiJ_G0015042.1 mouse_genomes_project 5 156077215 156101231 + processed_transcript lincRNA MGP_WSBEiJ_T0001761.1 MGP_WSBEiJ_G0001683.1 mouse_genomes_project 5 123995436 123997651 + TEC TEC MGP_WSBEiJ_T0071938.1 MGP_WSBEiJ_G0029043.1 mouse_genomes_project 5 109688293 109719925 - MGP_WSBEiJ_P0071938 Cplx1 protein_coding protein_coding MGP_WSBEiJ_T0071939.1 MGP_WSBEiJ_G0029043.1 mouse_genomes_project 5 109689998 109719901 - MGP_WSBEiJ_P0071939 Cplx1 protein_coding protein_coding MGP_WSBEiJ_T0070330.1 MGP_WSBEiJ_G0028714.1 mouse_genomes_project 5 42017394 42025215 + MGP_WSBEiJ_P0070330 Bst1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070331.1 MGP_WSBEiJ_G0028714.1 mouse_genomes_project 5 42017400 42035679 + MGP_WSBEiJ_P0070331 Bst1 protein_coding protein_coding MGP_WSBEiJ_T0070332.1 MGP_WSBEiJ_G0028714.1 mouse_genomes_project 5 42020447 42035149 + Bst1 protein_coding retained_intron MGP_WSBEiJ_T0070333.1 MGP_WSBEiJ_G0028714.1 mouse_genomes_project 5 42028806 42034094 + Bst1 protein_coding retained_intron MGP_WSBEiJ_T0014763.1 MGP_WSBEiJ_G0012893.1 mouse_genomes_project 5 152242339 152242833 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096833.1 MGP_WSBEiJ_G0035514.1 mouse_genomes_project 5 139317911 139319621 + pseudogene pseudogene MGP_WSBEiJ_T0004669.1 MGP_WSBEiJ_G0004034.1 mouse_genomes_project 5 100782312 100801302 + Tmem150cos antisense antisense MGP_WSBEiJ_T0004670.1 MGP_WSBEiJ_G0004034.1 mouse_genomes_project 5 100798063 100801426 + Tmem150cos antisense antisense MGP_WSBEiJ_T0069082.1 MGP_WSBEiJ_G0028500.1 mouse_genomes_project 5 18209197 18285561 - MGP_WSBEiJ_P0069082 Rsbn1l protein_coding protein_coding MGP_WSBEiJ_T0069083.1 MGP_WSBEiJ_G0028500.1 mouse_genomes_project 5 18212947 18290129 - MGP_WSBEiJ_P0069083 Rsbn1l protein_coding protein_coding MGP_WSBEiJ_T0069084.1 MGP_WSBEiJ_G0028500.1 mouse_genomes_project 5 18239033 18241322 - Rsbn1l protein_coding retained_intron MGP_WSBEiJ_T0069085.1 MGP_WSBEiJ_G0028500.1 mouse_genomes_project 5 18239064 18266031 - MGP_WSBEiJ_P0069085 Rsbn1l protein_coding protein_coding MGP_WSBEiJ_T0074209.1 MGP_WSBEiJ_G0029452.1 mouse_genomes_project 5 142873434 142914909 + MGP_WSBEiJ_P0074209 Dnaaf5 protein_coding protein_coding MGP_WSBEiJ_T0074210.1 MGP_WSBEiJ_G0029452.1 mouse_genomes_project 5 142892540 142904702 + Dnaaf5 protein_coding processed_transcript MGP_WSBEiJ_T0071073.1 MGP_WSBEiJ_G0028838.1 mouse_genomes_project 5 76513250 76530828 + MGP_WSBEiJ_P0071073 Paics protein_coding protein_coding MGP_WSBEiJ_T0071074.1 MGP_WSBEiJ_G0028838.1 mouse_genomes_project 5 76513291 76530832 + MGP_WSBEiJ_P0071074 Paics protein_coding protein_coding MGP_WSBEiJ_T0071075.1 MGP_WSBEiJ_G0028838.1 mouse_genomes_project 5 76513311 76530636 + MGP_WSBEiJ_P0071075 Paics protein_coding protein_coding MGP_WSBEiJ_T0071076.1 MGP_WSBEiJ_G0028838.1 mouse_genomes_project 5 76513325 76522411 + MGP_WSBEiJ_P0071076 Paics protein_coding protein_coding MGP_WSBEiJ_T0071077.1 MGP_WSBEiJ_G0028838.1 mouse_genomes_project 5 76513720 76525823 + MGP_WSBEiJ_P0071077 Paics protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071078.1 MGP_WSBEiJ_G0028838.1 mouse_genomes_project 5 76524808 76526314 + Paics protein_coding retained_intron MGP_WSBEiJ_T0071079.1 MGP_WSBEiJ_G0028838.1 mouse_genomes_project 5 76529479 76530164 + Paics protein_coding retained_intron MGP_WSBEiJ_T0069279.1 MGP_WSBEiJ_G0028535.1 mouse_genomes_project 5 21998803 22036920 + MGP_WSBEiJ_P0069279 Agap3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0069280.1 MGP_WSBEiJ_G0028535.1 mouse_genomes_project 5 21999050 22057180 + MGP_WSBEiJ_P0069280 Agap3 protein_coding protein_coding MGP_WSBEiJ_T0069281.1 MGP_WSBEiJ_G0028535.1 mouse_genomes_project 5 21999207 22036056 + Agap3 protein_coding processed_transcript MGP_WSBEiJ_T0069282.1 MGP_WSBEiJ_G0028535.1 mouse_genomes_project 5 22024531 22036912 + MGP_WSBEiJ_P0069282 Agap3 protein_coding protein_coding MGP_WSBEiJ_T0069283.1 MGP_WSBEiJ_G0028535.1 mouse_genomes_project 5 22031505 22057170 + MGP_WSBEiJ_P0069283 Agap3 protein_coding protein_coding MGP_WSBEiJ_T0069284.1 MGP_WSBEiJ_G0028535.1 mouse_genomes_project 5 22031883 22036910 + Agap3 protein_coding processed_transcript MGP_WSBEiJ_T0004794.1 MGP_WSBEiJ_G0004121.1 mouse_genomes_project 5 143904765 143917402 + Gm16122 antisense antisense MGP_WSBEiJ_T0014425.1 MGP_WSBEiJ_G0012555.1 mouse_genomes_project 5 6944007 6944752 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074141.1 MGP_WSBEiJ_G0029440.1 mouse_genomes_project 5 141854059 141858411 - MGP_WSBEiJ_P0074141 BC037034 protein_coding protein_coding MGP_WSBEiJ_T0074142.1 MGP_WSBEiJ_G0029440.1 mouse_genomes_project 5 141854061 141857757 - MGP_WSBEiJ_P0074142 BC037034 protein_coding protein_coding MGP_WSBEiJ_T0074143.1 MGP_WSBEiJ_G0029440.1 mouse_genomes_project 5 141854062 141858407 - MGP_WSBEiJ_P0074143 BC037034 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074144.1 MGP_WSBEiJ_G0029440.1 mouse_genomes_project 5 141854063 141858450 - BC037034 protein_coding retained_intron MGP_WSBEiJ_T0074145.1 MGP_WSBEiJ_G0029440.1 mouse_genomes_project 5 141854522 141855363 - MGP_WSBEiJ_P0074145 BC037034 protein_coding protein_coding MGP_WSBEiJ_T0074146.1 MGP_WSBEiJ_G0029440.1 mouse_genomes_project 5 141855986 141856611 - BC037034 protein_coding retained_intron MGP_WSBEiJ_T0074147.1 MGP_WSBEiJ_G0029440.1 mouse_genomes_project 5 141856669 141857555 - BC037034 protein_coding retained_intron MGP_WSBEiJ_T0071284.1 MGP_WSBEiJ_G0028897.1 mouse_genomes_project 5 88762361 88763990 + MGP_WSBEiJ_P0071284 Utp3 protein_coding protein_coding MGP_WSBEiJ_T0100875.1 MGP_WSBEiJ_G0039333.1 mouse_genomes_project 5 150009125 150021267 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001398.1 MGP_WSBEiJ_G0001326.1 mouse_genomes_project 5 2639612 2641549 + TEC TEC MGP_WSBEiJ_T0010564.1 MGP_WSBEiJ_G0008721.1 mouse_genomes_project 5 144274984 144275055 + Mir7038 miRNA miRNA MGP_WSBEiJ_T0074170.1 MGP_WSBEiJ_G0029445.1 mouse_genomes_project 5 142115315 142135543 + MGP_WSBEiJ_P0074170 Zfp157 protein_coding protein_coding MGP_WSBEiJ_T0074171.1 MGP_WSBEiJ_G0029445.1 mouse_genomes_project 5 142115326 142122992 + Zfp157 protein_coding retained_intron MGP_WSBEiJ_T0074172.1 MGP_WSBEiJ_G0029445.1 mouse_genomes_project 5 142115354 142121077 + Zfp157 protein_coding retained_intron MGP_WSBEiJ_T0074173.1 MGP_WSBEiJ_G0029445.1 mouse_genomes_project 5 142115358 142123036 + Zfp157 protein_coding retained_intron MGP_WSBEiJ_T0074174.1 MGP_WSBEiJ_G0029445.1 mouse_genomes_project 5 142115366 142131166 + MGP_WSBEiJ_P0074174 Zfp157 protein_coding protein_coding MGP_WSBEiJ_T0074175.1 MGP_WSBEiJ_G0029445.1 mouse_genomes_project 5 142115387 142131178 + MGP_WSBEiJ_P0074175 Zfp157 protein_coding protein_coding MGP_WSBEiJ_T0001762.1 MGP_WSBEiJ_G0001684.1 mouse_genomes_project 5 124199763 124202855 + TEC TEC MGP_WSBEiJ_T0071916.1 MGP_WSBEiJ_G0029036.1 mouse_genomes_project 5 109268531 109306032 + MGP_WSBEiJ_P0071916 Ccdc18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071917.1 MGP_WSBEiJ_G0029036.1 mouse_genomes_project 5 109268570 109383052 + MGP_WSBEiJ_P0071917 Ccdc18 protein_coding protein_coding MGP_WSBEiJ_T0071918.1 MGP_WSBEiJ_G0029036.1 mouse_genomes_project 5 109268602 109276466 + Ccdc18 protein_coding retained_intron MGP_WSBEiJ_T0071919.1 MGP_WSBEiJ_G0029036.1 mouse_genomes_project 5 109268637 109382419 + MGP_WSBEiJ_P0071919 Ccdc18 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071920.1 MGP_WSBEiJ_G0029036.1 mouse_genomes_project 5 109306217 109318735 + Ccdc18 protein_coding processed_transcript MGP_WSBEiJ_T0098386.1 MGP_WSBEiJ_G0037049.1 mouse_genomes_project 5 126295614 126295761 + Gm24840 snRNA snRNA MGP_WSBEiJ_T0008250.1 MGP_WSBEiJ_G0006703.1 mouse_genomes_project 5 129681834 129721790 + Gm42954 lincRNA lincRNA MGP_WSBEiJ_T0008102.1 MGP_WSBEiJ_G0006609.1 mouse_genomes_project 5 102409652 102413866 + Gm20484 lincRNA lincRNA MGP_WSBEiJ_T0073516.1 MGP_WSBEiJ_G0029328.1 mouse_genomes_project 5 137343825 137391329 + MGP_WSBEiJ_P0073516 Gatsl2 protein_coding protein_coding MGP_WSBEiJ_T0073517.1 MGP_WSBEiJ_G0029328.1 mouse_genomes_project 5 137344558 137391316 + Gatsl2 protein_coding processed_transcript MGP_WSBEiJ_T0073518.1 MGP_WSBEiJ_G0029328.1 mouse_genomes_project 5 137381993 137384543 + Gatsl2 protein_coding retained_intron MGP_WSBEiJ_T0071385.1 MGP_WSBEiJ_G0028926.1 mouse_genomes_project 5 91848665 91963932 + MGP_WSBEiJ_P0071385 Parm1 protein_coding protein_coding MGP_WSBEiJ_T0072051.1 MGP_WSBEiJ_G0029065.1 mouse_genomes_project 5 111702984 111773384 + MGP_WSBEiJ_P0072051 Pole protein_coding protein_coding MGP_WSBEiJ_T0072052.1 MGP_WSBEiJ_G0029065.1 mouse_genomes_project 5 111703019 111707862 + MGP_WSBEiJ_P0072052 Pole protein_coding protein_coding MGP_WSBEiJ_T0072053.1 MGP_WSBEiJ_G0029065.1 mouse_genomes_project 5 111703055 111724756 + Pole protein_coding retained_intron MGP_WSBEiJ_T0072054.1 MGP_WSBEiJ_G0029065.1 mouse_genomes_project 5 111738108 111748146 + Pole protein_coding retained_intron MGP_WSBEiJ_T0072055.1 MGP_WSBEiJ_G0029065.1 mouse_genomes_project 5 111761820 111773361 + Pole protein_coding retained_intron MGP_WSBEiJ_T0072056.1 MGP_WSBEiJ_G0029065.1 mouse_genomes_project 5 111766800 111773363 + MGP_WSBEiJ_P0072056 Pole protein_coding protein_coding MGP_WSBEiJ_T0072057.1 MGP_WSBEiJ_G0029065.1 mouse_genomes_project 5 111769439 111773346 + Pole protein_coding retained_intron MGP_WSBEiJ_T0014537.1 MGP_WSBEiJ_G0012667.1 mouse_genomes_project 5 52616769 52617847 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099608.1 MGP_WSBEiJ_G0038271.1 mouse_genomes_project 5 92576868 92577012 + Gm25290 snoRNA snoRNA MGP_WSBEiJ_T0001806.1 MGP_WSBEiJ_G0001727.1 mouse_genomes_project 5 134059455 134061984 - TEC TEC MGP_WSBEiJ_T0014746.1 MGP_WSBEiJ_G0012876.1 mouse_genomes_project 5 148482570 148482783 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073766.1 MGP_WSBEiJ_G0029369.1 mouse_genomes_project 5 139317765 139320920 + MGP_WSBEiJ_P0073766 Hspb1 protein_coding protein_coding MGP_WSBEiJ_T0073767.1 MGP_WSBEiJ_G0029369.1 mouse_genomes_project 5 139317842 139320918 + MGP_WSBEiJ_P0073767 Hspb1 protein_coding protein_coding MGP_WSBEiJ_T0071646.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101516130 101553689 - MGP_WSBEiJ_P0071646 Helq protein_coding protein_coding MGP_WSBEiJ_T0071647.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101516136 101519416 - Helq protein_coding retained_intron MGP_WSBEiJ_T0071648.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101516430 101553559 - MGP_WSBEiJ_P0071648 Helq protein_coding protein_coding MGP_WSBEiJ_T0071649.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101516439 101520791 - Helq protein_coding retained_intron MGP_WSBEiJ_T0071650.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101520714 101528038 - MGP_WSBEiJ_P0071650 Helq protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071651.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101525525 101528122 - Helq protein_coding retained_intron MGP_WSBEiJ_T0071652.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101532475 101537028 - Helq protein_coding retained_intron MGP_WSBEiJ_T0071653.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101537126 101547826 - Helq protein_coding processed_transcript MGP_WSBEiJ_T0071654.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101537207 101553668 - MGP_WSBEiJ_P0071654 Helq protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071655.1 MGP_WSBEiJ_G0028979.1 mouse_genomes_project 5 101546871 101548152 - Helq protein_coding retained_intron MGP_WSBEiJ_T0010541.1 MGP_WSBEiJ_G0008698.1 mouse_genomes_project 5 124315415 124315480 - Mir7031 miRNA miRNA MGP_WSBEiJ_T0069086.1 MGP_WSBEiJ_G0028501.1 mouse_genomes_project 5 18325112 18395500 - MGP_WSBEiJ_P0069086 Ptpn12 protein_coding protein_coding MGP_WSBEiJ_T0069087.1 MGP_WSBEiJ_G0028501.1 mouse_genomes_project 5 18325113 18327729 - Ptpn12 protein_coding retained_intron MGP_WSBEiJ_T0069088.1 MGP_WSBEiJ_G0028501.1 mouse_genomes_project 5 18336580 18339675 - Ptpn12 protein_coding retained_intron MGP_WSBEiJ_T0069089.1 MGP_WSBEiJ_G0028501.1 mouse_genomes_project 5 18336754 18347862 - Ptpn12 protein_coding retained_intron MGP_WSBEiJ_T0069090.1 MGP_WSBEiJ_G0028501.1 mouse_genomes_project 5 18339551 18395342 - MGP_WSBEiJ_P0069090 Ptpn12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069091.1 MGP_WSBEiJ_G0028501.1 mouse_genomes_project 5 18343625 18395486 - MGP_WSBEiJ_P0069091 Ptpn12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069092.1 MGP_WSBEiJ_G0028501.1 mouse_genomes_project 5 18347699 18395314 - MGP_WSBEiJ_P0069092 Ptpn12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071678.1 MGP_WSBEiJ_G0028985.1 mouse_genomes_project 5 102659950 102812872 - MGP_WSBEiJ_P0071678 Wdfy3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0071679.1 MGP_WSBEiJ_G0028985.1 mouse_genomes_project 5 102659951 102901887 - MGP_WSBEiJ_P0071679 Wdfy3 protein_coding protein_coding MGP_WSBEiJ_T0071680.1 MGP_WSBEiJ_G0028985.1 mouse_genomes_project 5 102661932 102678469 - Wdfy3 protein_coding retained_intron MGP_WSBEiJ_T0071681.1 MGP_WSBEiJ_G0028985.1 mouse_genomes_project 5 102663154 102812872 - MGP_WSBEiJ_P0071681 Wdfy3 protein_coding protein_coding MGP_WSBEiJ_T0071682.1 MGP_WSBEiJ_G0028985.1 mouse_genomes_project 5 102754155 102762219 - MGP_WSBEiJ_P0071682 Wdfy3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071683.1 MGP_WSBEiJ_G0028985.1 mouse_genomes_project 5 102760659 102901887 - MGP_WSBEiJ_P0071683 Wdfy3 protein_coding protein_coding MGP_WSBEiJ_T0071684.1 MGP_WSBEiJ_G0028985.1 mouse_genomes_project 5 102766443 102769043 - Wdfy3 protein_coding processed_transcript MGP_WSBEiJ_T0014646.1 MGP_WSBEiJ_G0012776.1 mouse_genomes_project 5 103780012 103780267 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001671.1 MGP_WSBEiJ_G0001593.1 mouse_genomes_project 5 92144561 92145383 - TEC TEC MGP_WSBEiJ_T0098321.1 MGP_WSBEiJ_G0036984.1 mouse_genomes_project 5 4147650 4147801 - Gm24525 snRNA snRNA MGP_WSBEiJ_T0074295.1 MGP_WSBEiJ_G0029469.1 mouse_genomes_project 5 143611964 143615249 - MGP_WSBEiJ_P0074295 Psmg3 protein_coding protein_coding MGP_WSBEiJ_T0074296.1 MGP_WSBEiJ_G0029469.1 mouse_genomes_project 5 143611985 143615207 - MGP_WSBEiJ_P0074296 Psmg3 protein_coding protein_coding MGP_WSBEiJ_T0074297.1 MGP_WSBEiJ_G0029469.1 mouse_genomes_project 5 143612838 143615239 - Psmg3 protein_coding retained_intron MGP_WSBEiJ_T0011415.1 MGP_WSBEiJ_G0009572.1 mouse_genomes_project 5 143049846 143050123 + Gm27316 misc_RNA misc_RNA MGP_WSBEiJ_T0008104.1 MGP_WSBEiJ_G0006611.1 mouse_genomes_project 5 102519935 102522192 + Gm43270 lincRNA lincRNA MGP_WSBEiJ_T0001838.1 MGP_WSBEiJ_G0001758.1 mouse_genomes_project 5 138280435 138282201 - TEC TEC MGP_WSBEiJ_T0073999.1 MGP_WSBEiJ_G0029410.1 mouse_genomes_project 5 141170524 141174345 - MGP_WSBEiJ_P0073999 Mospd3 protein_coding protein_coding MGP_WSBEiJ_T0074000.1 MGP_WSBEiJ_G0029410.1 mouse_genomes_project 5 141170524 141174681 - MGP_WSBEiJ_P0074000 Mospd3 protein_coding protein_coding MGP_WSBEiJ_T0074001.1 MGP_WSBEiJ_G0029410.1 mouse_genomes_project 5 141171034 141174437 - Mospd3 protein_coding processed_transcript MGP_WSBEiJ_T0074002.1 MGP_WSBEiJ_G0029410.1 mouse_genomes_project 5 141171086 141174695 - MGP_WSBEiJ_P0074002 Mospd3 protein_coding protein_coding MGP_WSBEiJ_T0074003.1 MGP_WSBEiJ_G0029410.1 mouse_genomes_project 5 141173670 141174361 - MGP_WSBEiJ_P0074003 Mospd3 protein_coding protein_coding MGP_WSBEiJ_T0074004.1 MGP_WSBEiJ_G0029410.1 mouse_genomes_project 5 141173719 141174328 - Mospd3 protein_coding retained_intron MGP_WSBEiJ_T0004578.1 MGP_WSBEiJ_G0003964.1 mouse_genomes_project 5 29272750 29274070 - 4930566F21Rik antisense antisense MGP_WSBEiJ_T0004579.1 MGP_WSBEiJ_G0003964.1 mouse_genomes_project 5 29272754 29284139 - 4930566F21Rik antisense antisense MGP_WSBEiJ_T0010518.1 MGP_WSBEiJ_G0008675.1 mouse_genomes_project 5 74626733 74626807 + Mir7025 miRNA miRNA MGP_WSBEiJ_T0001857.1 MGP_WSBEiJ_G0001777.1 mouse_genomes_project 5 147584073 147585162 + TEC TEC MGP_WSBEiJ_T0099593.1 MGP_WSBEiJ_G0038256.1 mouse_genomes_project 5 59620107 59620230 - Gm23708 snoRNA snoRNA MGP_WSBEiJ_T0001633.1 MGP_WSBEiJ_G0001556.1 mouse_genomes_project 5 68475641 68478038 - TEC TEC MGP_WSBEiJ_T0008117.1 MGP_WSBEiJ_G0006619.1 mouse_genomes_project 5 106421398 106426016 + Gm42749 lincRNA lincRNA MGP_WSBEiJ_T0008118.1 MGP_WSBEiJ_G0006619.1 mouse_genomes_project 5 106425389 106427782 + Gm42749 lincRNA lincRNA MGP_WSBEiJ_T0098354.1 MGP_WSBEiJ_G0037017.1 mouse_genomes_project 5 75026566 75026671 - Gm24502 snRNA snRNA MGP_WSBEiJ_T0074559.1 MGP_WSBEiJ_G0029528.1 mouse_genomes_project 5 148982828 148992824 - Smurf1 protein_coding retained_intron MGP_WSBEiJ_T0074560.1 MGP_WSBEiJ_G0029528.1 mouse_genomes_project 5 148982828 149077884 - MGP_WSBEiJ_P0074560 Smurf1 protein_coding protein_coding MGP_WSBEiJ_T0074561.1 MGP_WSBEiJ_G0029528.1 mouse_genomes_project 5 148982835 149077892 - MGP_WSBEiJ_P0074561 Smurf1 protein_coding protein_coding MGP_WSBEiJ_T0074562.1 MGP_WSBEiJ_G0029528.1 mouse_genomes_project 5 148985445 149077892 - MGP_WSBEiJ_P0074562 Smurf1 protein_coding protein_coding MGP_WSBEiJ_T0074563.1 MGP_WSBEiJ_G0029528.1 mouse_genomes_project 5 148990916 149006305 - MGP_WSBEiJ_P0074563 Smurf1 protein_coding protein_coding MGP_WSBEiJ_T0073023.1 MGP_WSBEiJ_G0029243.1 mouse_genomes_project 5 125786414 125854189 + Psmd9 protein_coding processed_transcript MGP_WSBEiJ_T0073030.1 MGP_WSBEiJ_G0029243.1 mouse_genomes_project 5 125841961 125859878 + Psmd9 protein_coding processed_transcript MGP_WSBEiJ_T0073031.1 MGP_WSBEiJ_G0029243.1 mouse_genomes_project 5 125841961 125866075 + MGP_WSBEiJ_P0073031 Psmd9 protein_coding protein_coding MGP_WSBEiJ_T0073032.1 MGP_WSBEiJ_G0029243.1 mouse_genomes_project 5 125842029 125842806 + Psmd9 protein_coding retained_intron MGP_WSBEiJ_T0073033.1 MGP_WSBEiJ_G0029243.1 mouse_genomes_project 5 125842720 125844619 + Psmd9 protein_coding TEC MGP_WSBEiJ_T0073034.1 MGP_WSBEiJ_G0029243.1 mouse_genomes_project 5 125849198 125864466 + MGP_WSBEiJ_P0073034 Psmd9 protein_coding protein_coding MGP_WSBEiJ_T0073035.1 MGP_WSBEiJ_G0029243.1 mouse_genomes_project 5 125856442 125864466 + MGP_WSBEiJ_P0073035 Psmd9 protein_coding protein_coding MGP_WSBEiJ_T0004645.1 MGP_WSBEiJ_G0004018.1 mouse_genomes_project 5 81577945 81585036 - Gm16054 antisense antisense MGP_WSBEiJ_T0071790.1 MGP_WSBEiJ_G0029014.1 mouse_genomes_project 5 107506102 107511711 - MGP_WSBEiJ_P0071790 Barhl2 protein_coding protein_coding MGP_WSBEiJ_T0100103.1 MGP_WSBEiJ_G0038707.1 mouse_genomes_project 5 55050249 55129070 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0068976.1 MGP_WSBEiJ_G0028482.1 mouse_genomes_project 5 5923784 5956321 - MGP_WSBEiJ_P0068976 Crot protein_coding protein_coding MGP_WSBEiJ_T0068977.1 MGP_WSBEiJ_G0028482.1 mouse_genomes_project 5 5932061 5941136 - Crot protein_coding processed_transcript MGP_WSBEiJ_T0068978.1 MGP_WSBEiJ_G0028482.1 mouse_genomes_project 5 5945174 5956039 - Crot protein_coding retained_intron MGP_WSBEiJ_T0072804.1 MGP_WSBEiJ_G0029213.1 mouse_genomes_project 5 124088877 124165646 + MGP_WSBEiJ_P0072804 Brap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072805.1 MGP_WSBEiJ_G0029213.1 mouse_genomes_project 5 124088904 124092285 + Brap protein_coding retained_intron MGP_WSBEiJ_T0072806.1 MGP_WSBEiJ_G0029213.1 mouse_genomes_project 5 124089070 124165652 + MGP_WSBEiJ_P0072806 Brap protein_coding protein_coding MGP_WSBEiJ_T0072807.1 MGP_WSBEiJ_G0029213.1 mouse_genomes_project 5 124090346 124105261 + MGP_WSBEiJ_P0072807 Brap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072808.1 MGP_WSBEiJ_G0029213.1 mouse_genomes_project 5 124090355 124093835 + MGP_WSBEiJ_P0072808 Brap protein_coding protein_coding MGP_WSBEiJ_T0072809.1 MGP_WSBEiJ_G0029213.1 mouse_genomes_project 5 124090385 124092017 + Brap protein_coding retained_intron MGP_WSBEiJ_T0072810.1 MGP_WSBEiJ_G0029213.1 mouse_genomes_project 5 124095042 124165651 + Brap protein_coding processed_transcript MGP_WSBEiJ_T0072811.1 MGP_WSBEiJ_G0029213.1 mouse_genomes_project 5 124161314 124165648 + Brap protein_coding retained_intron MGP_WSBEiJ_T0071377.1 MGP_WSBEiJ_G0028922.1 mouse_genomes_project 5 91349121 91359860 + MGP_WSBEiJ_P0071377 Epgn protein_coding protein_coding MGP_WSBEiJ_T0071378.1 MGP_WSBEiJ_G0028922.1 mouse_genomes_project 5 91349121 91360862 + MGP_WSBEiJ_P0071378 Epgn protein_coding protein_coding MGP_WSBEiJ_T0001748.1 MGP_WSBEiJ_G0001670.1 mouse_genomes_project 5 120730843 120731863 + TEC TEC MGP_WSBEiJ_T0070936.1 MGP_WSBEiJ_G0028815.1 mouse_genomes_project 5 72997225 73023074 - MGP_WSBEiJ_P0070936 Lrrc66 protein_coding protein_coding MGP_WSBEiJ_T0070937.1 MGP_WSBEiJ_G0028815.1 mouse_genomes_project 5 73020246 73020883 - MGP_WSBEiJ_P0070937 Lrrc66 protein_coding protein_coding MGP_WSBEiJ_T0010509.1 MGP_WSBEiJ_G0008666.1 mouse_genomes_project 5 49574129 49574218 - Gm44377 miRNA miRNA MGP_WSBEiJ_T0001591.1 MGP_WSBEiJ_G0001514.1 mouse_genomes_project 5 64515355 64516829 - TEC TEC MGP_WSBEiJ_T0008255.1 MGP_WSBEiJ_G0006706.1 mouse_genomes_project 5 130003259 130018330 + 4930572K03Rik lincRNA lincRNA MGP_WSBEiJ_T0008256.1 MGP_WSBEiJ_G0006706.1 mouse_genomes_project 5 130003264 130018344 + 4930572K03Rik lincRNA lincRNA MGP_WSBEiJ_T0070615.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64472895 64476154 - MGP_WSBEiJ_P0070615 Rpl9 protein_coding protein_coding MGP_WSBEiJ_T0070616.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64472902 64473638 - Rpl9 protein_coding retained_intron MGP_WSBEiJ_T0070617.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64472902 64475729 - MGP_WSBEiJ_P0070617 Rpl9 protein_coding protein_coding MGP_WSBEiJ_T0070618.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64472902 64476168 - MGP_WSBEiJ_P0070618 Rpl9 protein_coding protein_coding MGP_WSBEiJ_T0070619.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64472902 64475557 - MGP_WSBEiJ_P0070619 Rpl9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070620.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64472902 64476123 - MGP_WSBEiJ_P0070620 Rpl9 protein_coding protein_coding MGP_WSBEiJ_T0070621.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64472903 64476122 - Rpl9 protein_coding retained_intron MGP_WSBEiJ_T0070622.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64472945 64474097 - Rpl9 protein_coding retained_intron MGP_WSBEiJ_T0070623.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64473016 64476104 - MGP_WSBEiJ_P0070623 Rpl9 protein_coding protein_coding MGP_WSBEiJ_T0070624.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64473400 64476105 - Rpl9 protein_coding retained_intron MGP_WSBEiJ_T0070625.1 MGP_WSBEiJ_G0028764.1 mouse_genomes_project 5 64473640 64475715 - Rpl9 protein_coding retained_intron MGP_WSBEiJ_T0073189.1 MGP_WSBEiJ_G0029269.1 mouse_genomes_project 5 127040310 127052694 + MGP_WSBEiJ_P0073189 2810006K23Rik protein_coding protein_coding MGP_WSBEiJ_T0073190.1 MGP_WSBEiJ_G0029269.1 mouse_genomes_project 5 127040319 127055303 + MGP_WSBEiJ_P0073190 2810006K23Rik protein_coding protein_coding MGP_WSBEiJ_T0069417.1 MGP_WSBEiJ_G0028567.1 mouse_genomes_project 5 27469378 27469678 - MGP_WSBEiJ_P0069417 Gm5129 protein_coding protein_coding MGP_WSBEiJ_T0099590.1 MGP_WSBEiJ_G0038253.1 mouse_genomes_project 5 55788260 55788383 + Gm24902 snoRNA snoRNA MGP_WSBEiJ_T0100105.1 MGP_WSBEiJ_G0038709.1 mouse_genomes_project 5 65342864 65343243 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0001433.1 MGP_WSBEiJ_G0001361.1 mouse_genomes_project 5 20255467 20260200 - TEC TEC MGP_WSBEiJ_T0074251.1 MGP_WSBEiJ_G0029458.1 mouse_genomes_project 5 143102818 143210702 - MGP_WSBEiJ_P0074251 3110082I17Rik protein_coding protein_coding MGP_WSBEiJ_T0074252.1 MGP_WSBEiJ_G0029458.1 mouse_genomes_project 5 143102818 143210727 - MGP_WSBEiJ_P0074252 3110082I17Rik protein_coding protein_coding MGP_WSBEiJ_T0074253.1 MGP_WSBEiJ_G0029458.1 mouse_genomes_project 5 143106684 143210711 - 3110082I17Rik protein_coding retained_intron MGP_WSBEiJ_T0074263.1 MGP_WSBEiJ_G0029458.1 mouse_genomes_project 5 143160603 143205743 - 3110082I17Rik protein_coding processed_transcript MGP_WSBEiJ_T0008292.1 MGP_WSBEiJ_G0006732.1 mouse_genomes_project 5 144399143 144400050 - Gm42808 lincRNA lincRNA MGP_WSBEiJ_T0069827.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31131629 31162695 - MGP_WSBEiJ_P0069827 Ctbp1 protein_coding protein_coding MGP_WSBEiJ_T0069828.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31135447 31162721 - MGP_WSBEiJ_P0069828 Ctbp1 protein_coding protein_coding MGP_WSBEiJ_T0069829.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31135478 31162719 - MGP_WSBEiJ_P0069829 Ctbp1 protein_coding protein_coding MGP_WSBEiJ_T0069830.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31135749 31162708 - MGP_WSBEiJ_P0069830 Ctbp1 protein_coding protein_coding MGP_WSBEiJ_T0069831.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31135892 31136975 - Ctbp1 protein_coding retained_intron MGP_WSBEiJ_T0069832.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31135985 31137278 - Ctbp1 protein_coding retained_intron MGP_WSBEiJ_T0069833.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31138107 31157215 - MGP_WSBEiJ_P0069833 Ctbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069834.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31138582 31162706 - MGP_WSBEiJ_P0069834 Ctbp1 protein_coding protein_coding MGP_WSBEiJ_T0069835.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31147027 31157363 - MGP_WSBEiJ_P0069835 Ctbp1 protein_coding protein_coding MGP_WSBEiJ_T0069836.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31148369 31157251 - Ctbp1 protein_coding retained_intron MGP_WSBEiJ_T0069837.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31148786 31162306 - MGP_WSBEiJ_P0069837 Ctbp1 protein_coding protein_coding MGP_WSBEiJ_T0069838.1 MGP_WSBEiJ_G0028632.1 mouse_genomes_project 5 31154678 31162317 - MGP_WSBEiJ_P0069838 Ctbp1 protein_coding protein_coding MGP_WSBEiJ_T0014636.1 MGP_WSBEiJ_G0012766.1 mouse_genomes_project 5 98675322 98675875 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001526.1 MGP_WSBEiJ_G0001450.1 mouse_genomes_project 5 47318726 47320033 - TEC TEC MGP_WSBEiJ_T0069560.1 MGP_WSBEiJ_G0028593.1 mouse_genomes_project 5 28708212 28716575 + MGP_WSBEiJ_P0069560 Tcf23 protein_coding protein_coding MGP_WSBEiJ_T0074570.1 MGP_WSBEiJ_G0029530.1 mouse_genomes_project 5 149161744 149164689 - MGP_WSBEiJ_P0074570 1700018F24Rik protein_coding protein_coding MGP_WSBEiJ_T0001574.1 MGP_WSBEiJ_G0001498.1 mouse_genomes_project 5 56726375 56727411 + TEC TEC MGP_WSBEiJ_T0071210.1 MGP_WSBEiJ_G0028872.1 mouse_genomes_project 5 87532918 87562435 - MGP_WSBEiJ_P0071210 Ugt2a2 protein_coding protein_coding MGP_WSBEiJ_T0071212.1 MGP_WSBEiJ_G0028872.1 mouse_genomes_project 5 87533732 87562437 - MGP_WSBEiJ_P0071212 Ugt2a2 protein_coding protein_coding MGP_WSBEiJ_T0001493.1 MGP_WSBEiJ_G0001418.1 mouse_genomes_project 5 42423937 42427414 - TEC TEC MGP_WSBEiJ_T0004815.1 MGP_WSBEiJ_G0004136.1 mouse_genomes_project 5 154035911 154088230 - Gm15997 antisense antisense MGP_WSBEiJ_T0014683.1 MGP_WSBEiJ_G0012813.1 mouse_genomes_project 5 115445955 115446159 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072664.1 MGP_WSBEiJ_G0029181.1 mouse_genomes_project 5 122694322 122709619 - MGP_WSBEiJ_P0072664 Sdsl protein_coding protein_coding MGP_WSBEiJ_T0072665.1 MGP_WSBEiJ_G0029181.1 mouse_genomes_project 5 122694338 122709666 - MGP_WSBEiJ_P0072665 Sdsl protein_coding protein_coding MGP_WSBEiJ_T0072666.1 MGP_WSBEiJ_G0029181.1 mouse_genomes_project 5 122696823 122704294 - MGP_WSBEiJ_P0072666 Sdsl protein_coding protein_coding MGP_WSBEiJ_T0014564.1 MGP_WSBEiJ_G0012694.1 mouse_genomes_project 5 62701286 62701746 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008288.1 MGP_WSBEiJ_G0006728.1 mouse_genomes_project 5 141800723 141804406 - Gm454 lincRNA lincRNA MGP_WSBEiJ_T0010559.1 MGP_WSBEiJ_G0008716.1 mouse_genomes_project 5 141756475 141756563 - Mir93 miRNA miRNA MGP_WSBEiJ_T0001439.1 MGP_WSBEiJ_G0001366.1 mouse_genomes_project 5 22959929 22963951 + TEC TEC MGP_WSBEiJ_T0071675.1 MGP_WSBEiJ_G0028983.1 mouse_genomes_project 5 102471010 102477833 - MGP_WSBEiJ_P0071675 Nkx6-1 protein_coding protein_coding MGP_WSBEiJ_T0004630.1 MGP_WSBEiJ_G0004006.1 mouse_genomes_project 5 67084976 67151493 + Gm15477 antisense antisense MGP_WSBEiJ_T0004631.1 MGP_WSBEiJ_G0004006.1 mouse_genomes_project 5 67085046 67146964 + Gm15477 antisense antisense MGP_WSBEiJ_T0004648.1 MGP_WSBEiJ_G0004021.1 mouse_genomes_project 5 88030847 88107747 - 1700066N21Rik antisense antisense MGP_WSBEiJ_T0014490.1 MGP_WSBEiJ_G0012620.1 mouse_genomes_project 5 27531818 27532333 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098389.1 MGP_WSBEiJ_G0037052.1 mouse_genomes_project 5 133868481 133868585 + Gm23761 snRNA snRNA MGP_WSBEiJ_T0001419.1 MGP_WSBEiJ_G0001347.1 mouse_genomes_project 5 11696783 11699963 + TEC TEC MGP_WSBEiJ_T0098363.1 MGP_WSBEiJ_G0037026.1 mouse_genomes_project 5 86932953 86933059 - Gm24121 snRNA snRNA MGP_WSBEiJ_T0010566.1 MGP_WSBEiJ_G0008723.1 mouse_genomes_project 5 144977110 144977189 + Gm26113 miRNA miRNA MGP_WSBEiJ_T0074005.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141180358 141186779 - Pcolce protein_coding retained_intron MGP_WSBEiJ_T0074006.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141180358 141186858 - MGP_WSBEiJ_P0074006 Pcolce protein_coding protein_coding MGP_WSBEiJ_T0074007.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141180360 141181047 - Pcolce protein_coding retained_intron MGP_WSBEiJ_T0074008.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141180360 141185832 - MGP_WSBEiJ_P0074008 Pcolce protein_coding protein_coding MGP_WSBEiJ_T0074009.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141180363 141186738 - MGP_WSBEiJ_P0074009 Pcolce protein_coding protein_coding MGP_WSBEiJ_T0074010.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141182334 141183548 - Pcolce protein_coding retained_intron MGP_WSBEiJ_T0074011.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141182401 141186705 - Pcolce protein_coding processed_transcript MGP_WSBEiJ_T0074012.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141182777 141186060 - MGP_WSBEiJ_P0074012 Pcolce protein_coding protein_coding MGP_WSBEiJ_T0074013.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141182853 141189134 - MGP_WSBEiJ_P0074013 Pcolce protein_coding protein_coding MGP_WSBEiJ_T0074014.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141182853 141189156 - MGP_WSBEiJ_P0074014 Pcolce protein_coding protein_coding MGP_WSBEiJ_T0074015.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141183076 141186681 - Pcolce protein_coding retained_intron MGP_WSBEiJ_T0074016.1 MGP_WSBEiJ_G0029411.1 mouse_genomes_project 5 141184294 141186688 - Pcolce protein_coding processed_transcript MGP_WSBEiJ_T0100118.1 MGP_WSBEiJ_G0038717.1 mouse_genomes_project 5 120589107 120609213 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100119.1 MGP_WSBEiJ_G0038717.1 mouse_genomes_project 5 120608552 120609030 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0070120.1 MGP_WSBEiJ_G0028674.1 mouse_genomes_project 5 33902793 34020301 + MGP_WSBEiJ_P0070120 Afap1 protein_coding protein_coding MGP_WSBEiJ_T0070121.1 MGP_WSBEiJ_G0028674.1 mouse_genomes_project 5 33902875 34016106 + MGP_WSBEiJ_P0070121 Afap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0070122.1 MGP_WSBEiJ_G0028674.1 mouse_genomes_project 5 33902939 33915744 + Afap1 protein_coding processed_transcript MGP_WSBEiJ_T0070123.1 MGP_WSBEiJ_G0028674.1 mouse_genomes_project 5 33923137 34012405 + MGP_WSBEiJ_P0070123 Afap1 protein_coding protein_coding MGP_WSBEiJ_T0070124.1 MGP_WSBEiJ_G0028674.1 mouse_genomes_project 5 34002659 34006880 + Afap1 protein_coding retained_intron MGP_WSBEiJ_T0001743.1 MGP_WSBEiJ_G0001665.1 mouse_genomes_project 5 119555051 119556011 + TEC TEC MGP_WSBEiJ_T0014517.1 MGP_WSBEiJ_G0012647.1 mouse_genomes_project 5 37535885 37536784 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004663.1 MGP_WSBEiJ_G0004031.1 mouse_genomes_project 5 100361409 100397215 + Gm16226 antisense antisense MGP_WSBEiJ_T0004664.1 MGP_WSBEiJ_G0004031.1 mouse_genomes_project 5 100361409 100370775 + Gm16226 antisense antisense MGP_WSBEiJ_T0004665.1 MGP_WSBEiJ_G0004031.1 mouse_genomes_project 5 100361414 100397217 + Gm16226 antisense antisense MGP_WSBEiJ_T0004666.1 MGP_WSBEiJ_G0004031.1 mouse_genomes_project 5 100361438 100397213 + Gm16226 antisense antisense MGP_WSBEiJ_T0072394.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116706727 116722047 + MGP_WSBEiJ_P0072394 Oasl2 protein_coding protein_coding MGP_WSBEiJ_T0072395.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116706792 116709638 + MGP_WSBEiJ_P0072395 Oasl2 protein_coding protein_coding MGP_WSBEiJ_T0072396.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116706821 116709763 + MGP_WSBEiJ_P0072396 Oasl2 protein_coding protein_coding MGP_WSBEiJ_T0072397.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116707323 116708142 + Oasl2 protein_coding retained_intron MGP_WSBEiJ_T0072398.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116707367 116710075 + Oasl2 protein_coding retained_intron MGP_WSBEiJ_T0072399.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116707533 116722039 + MGP_WSBEiJ_P0072399 Oasl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072400.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116711160 116721033 + MGP_WSBEiJ_P0072400 Oasl2 protein_coding protein_coding MGP_WSBEiJ_T0072401.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116711641 116713755 + Oasl2 protein_coding retained_intron MGP_WSBEiJ_T0072402.1 MGP_WSBEiJ_G0029130.1 mouse_genomes_project 5 116714243 116716538 + Oasl2 protein_coding retained_intron MGP_WSBEiJ_T0004771.1 MGP_WSBEiJ_G0004105.1 mouse_genomes_project 5 137858184 137864298 + Gm42884 antisense antisense MGP_WSBEiJ_T0007921.1 MGP_WSBEiJ_G0006476.1 mouse_genomes_project 5 15707582 15716076 - Gm43030 lincRNA lincRNA MGP_WSBEiJ_T0008098.1 MGP_WSBEiJ_G0006607.1 mouse_genomes_project 5 101158169 101168619 - 5430416N02Rik lincRNA lincRNA MGP_WSBEiJ_T0008099.1 MGP_WSBEiJ_G0006607.1 mouse_genomes_project 5 101167819 101168459 - 5430416N02Rik lincRNA lincRNA MGP_WSBEiJ_T0008100.1 MGP_WSBEiJ_G0006607.1 mouse_genomes_project 5 101168077 101168599 - 5430416N02Rik lincRNA lincRNA MGP_WSBEiJ_T0004627.1 MGP_WSBEiJ_G0004003.1 mouse_genomes_project 5 66498088 66499379 - Gm42670 antisense antisense MGP_WSBEiJ_T0068805.1 MGP_WSBEiJ_G0028456.1 mouse_genomes_project 5 542062 654271 - MGP_WSBEiJ_P0068805 Ankib1 protein_coding protein_coding MGP_WSBEiJ_T0068806.1 MGP_WSBEiJ_G0028456.1 mouse_genomes_project 5 545531 554792 - Ankib1 protein_coding retained_intron MGP_WSBEiJ_T0068807.1 MGP_WSBEiJ_G0028456.1 mouse_genomes_project 5 545942 644653 - MGP_WSBEiJ_P0068807 Ankib1 protein_coding protein_coding MGP_WSBEiJ_T0068808.1 MGP_WSBEiJ_G0028456.1 mouse_genomes_project 5 546863 547292 - Ankib1 protein_coding retained_intron MGP_WSBEiJ_T0068809.1 MGP_WSBEiJ_G0028456.1 mouse_genomes_project 5 552619 554529 - Ankib1 protein_coding retained_intron MGP_WSBEiJ_T0068810.1 MGP_WSBEiJ_G0028456.1 mouse_genomes_project 5 586465 654133 - Ankib1 protein_coding retained_intron MGP_WSBEiJ_T0014673.1 MGP_WSBEiJ_G0012803.1 mouse_genomes_project 5 110509306 110511191 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099613.1 MGP_WSBEiJ_G0038276.1 mouse_genomes_project 5 100759923 100760006 - Gm26363 snoRNA snoRNA MGP_WSBEiJ_T0001576.1 MGP_WSBEiJ_G0001500.1 mouse_genomes_project 5 56864343 56869813 + TEC TEC MGP_WSBEiJ_T0001759.1 MGP_WSBEiJ_G0001681.1 mouse_genomes_project 5 123788513 123790379 + TEC TEC MGP_WSBEiJ_T0074485.1 MGP_WSBEiJ_G0029512.1 mouse_genomes_project 5 147904321 147943103 + MGP_WSBEiJ_P0074485 Eif2ak1 protein_coding protein_coding MGP_WSBEiJ_T0074486.1 MGP_WSBEiJ_G0029512.1 mouse_genomes_project 5 147904364 147917968 + Eif2ak1 protein_coding retained_intron MGP_WSBEiJ_T0074487.1 MGP_WSBEiJ_G0029512.1 mouse_genomes_project 5 147904480 147911762 + Eif2ak1 protein_coding retained_intron MGP_WSBEiJ_T0014457.1 MGP_WSBEiJ_G0012587.1 mouse_genomes_project 5 19943015 19943306 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004795.1 MGP_WSBEiJ_G0004122.1 mouse_genomes_project 5 143933122 143939485 + Gm16121 antisense antisense MGP_WSBEiJ_T0014410.1 MGP_WSBEiJ_G0012540.1 mouse_genomes_project 5 271075 271246 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0007950.1 MGP_WSBEiJ_G0006493.1 mouse_genomes_project 5 27631094 27636110 - Gm42450 lincRNA lincRNA MGP_WSBEiJ_T0001578.1 MGP_WSBEiJ_G0001502.1 mouse_genomes_project 5 57871661 57873874 + TEC TEC MGP_WSBEiJ_T0008076.1 MGP_WSBEiJ_G0006590.1 mouse_genomes_project 5 97433016 97444856 + Gm42601 lincRNA lincRNA MGP_WSBEiJ_T0074300.1 MGP_WSBEiJ_G0029471.1 mouse_genomes_project 5 143833906 144160102 - MGP_WSBEiJ_P0074300 Mad1l1 protein_coding protein_coding MGP_WSBEiJ_T0074301.1 MGP_WSBEiJ_G0029471.1 mouse_genomes_project 5 143833906 144160100 - MGP_WSBEiJ_P0074301 Mad1l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074302.1 MGP_WSBEiJ_G0029471.1 mouse_genomes_project 5 143833911 144007807 - Mad1l1 protein_coding processed_transcript MGP_WSBEiJ_T0074303.1 MGP_WSBEiJ_G0029471.1 mouse_genomes_project 5 143920560 143947339 - Mad1l1 protein_coding processed_transcript MGP_WSBEiJ_T0074304.1 MGP_WSBEiJ_G0029471.1 mouse_genomes_project 5 143975255 144007548 - Mad1l1 protein_coding processed_transcript MGP_WSBEiJ_T0074305.1 MGP_WSBEiJ_G0029471.1 mouse_genomes_project 5 143999122 144099438 - Mad1l1 protein_coding processed_transcript MGP_WSBEiJ_T0004711.1 MGP_WSBEiJ_G0004063.1 mouse_genomes_project 5 117311040 117311619 - 4930430O22Rik antisense antisense MGP_WSBEiJ_T0004712.1 MGP_WSBEiJ_G0004063.1 mouse_genomes_project 5 117311042 117311581 - 4930430O22Rik antisense antisense MGP_WSBEiJ_T0001436.1 MGP_WSBEiJ_G0001364.1 mouse_genomes_project 5 21693278 21696019 + TEC TEC MGP_WSBEiJ_T0004741.1 MGP_WSBEiJ_G0004084.1 mouse_genomes_project 5 124582144 124591232 + Gm15637 antisense antisense MGP_WSBEiJ_T0014633.1 MGP_WSBEiJ_G0012763.1 mouse_genomes_project 5 93816159 93818620 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014688.1 MGP_WSBEiJ_G0012818.1 mouse_genomes_project 5 116872392 116872764 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008218.1 MGP_WSBEiJ_G0006686.1 mouse_genomes_project 5 122903232 122903942 + Gm15749 lincRNA lincRNA MGP_WSBEiJ_T0097069.1 MGP_WSBEiJ_G0035750.1 mouse_genomes_project 5 92496578 92496685 - Gm24931 rRNA rRNA MGP_WSBEiJ_T0071207.1 MGP_WSBEiJ_G0028869.1 mouse_genomes_project 5 87380113 87396178 - MGP_WSBEiJ_P0071207 Ugt2a3 protein_coding protein_coding MGP_WSBEiJ_T0073051.1 MGP_WSBEiJ_G0029248.1 mouse_genomes_project 5 126127320 126129263 - MGP_WSBEiJ_P0073051 Il31 protein_coding protein_coding MGP_WSBEiJ_T0073052.1 MGP_WSBEiJ_G0029248.1 mouse_genomes_project 5 126127321 126129757 - MGP_WSBEiJ_P0073052 Il31 protein_coding protein_coding MGP_WSBEiJ_T0073053.1 MGP_WSBEiJ_G0029248.1 mouse_genomes_project 5 126127564 126140636 - MGP_WSBEiJ_P0073053 Il31 protein_coding protein_coding MGP_WSBEiJ_T0073054.1 MGP_WSBEiJ_G0029248.1 mouse_genomes_project 5 126129325 126129686 - Il31 protein_coding processed_transcript MGP_WSBEiJ_T0069142.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19271341 19732417 - MGP_WSBEiJ_P0069142 Reln protein_coding protein_coding MGP_WSBEiJ_T0069143.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19271783 19283814 - Reln protein_coding processed_transcript MGP_WSBEiJ_T0069144.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19272138 19732405 - MGP_WSBEiJ_P0069144 Reln protein_coding protein_coding MGP_WSBEiJ_T0069145.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19277743 19281709 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069146.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19282717 19286792 - Reln protein_coding processed_transcript MGP_WSBEiJ_T0069147.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19283378 19283734 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069148.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19286469 19322683 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069149.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19366311 19397249 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069150.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19390027 19732405 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069151.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19435036 19436266 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069152.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19447824 19522071 - MGP_WSBEiJ_P0069152 Reln protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069153.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19515474 19732405 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069154.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19560367 19732405 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069155.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19606681 19732405 - Reln protein_coding retained_intron MGP_WSBEiJ_T0069156.1 MGP_WSBEiJ_G0028514.1 mouse_genomes_project 5 19729785 19732417 - Reln protein_coding processed_transcript MGP_WSBEiJ_T0014478.1 MGP_WSBEiJ_G0012608.1 mouse_genomes_project 5 24220331 24220443 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074130.1 MGP_WSBEiJ_G0029436.1 mouse_genomes_project 5 141779497 141785916 + MGP_WSBEiJ_P0074130 Cnpy4 protein_coding protein_coding MGP_WSBEiJ_T0074131.1 MGP_WSBEiJ_G0029436.1 mouse_genomes_project 5 141781920 141784598 + MGP_WSBEiJ_P0074131 Cnpy4 protein_coding protein_coding MGP_WSBEiJ_T0074132.1 MGP_WSBEiJ_G0029436.1 mouse_genomes_project 5 141782115 141784152 + Cnpy4 protein_coding retained_intron MGP_WSBEiJ_T0014547.1 MGP_WSBEiJ_G0012677.1 mouse_genomes_project 5 56066269 56067709 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001680.1 MGP_WSBEiJ_G0001602.1 mouse_genomes_project 5 97470710 97471252 - TEC TEC MGP_WSBEiJ_T0014581.1 MGP_WSBEiJ_G0012711.1 mouse_genomes_project 5 69789214 69789828 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014767.1 MGP_WSBEiJ_G0012897.1 mouse_genomes_project 5 154224271 154224730 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069418.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27469429 27523704 + MGP_WSBEiJ_P0069418 Dnajb6 protein_coding protein_coding MGP_WSBEiJ_T0069419.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27469730 27522866 + MGP_WSBEiJ_P0069419 Dnajb6 protein_coding protein_coding MGP_WSBEiJ_T0069420.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27469736 27493326 + MGP_WSBEiJ_P0069420 Dnajb6 protein_coding protein_coding MGP_WSBEiJ_T0069421.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27469765 27474137 + Dnajb6 protein_coding processed_transcript MGP_WSBEiJ_T0069422.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27469774 27556317 + MGP_WSBEiJ_P0069422 Dnajb6 protein_coding protein_coding MGP_WSBEiJ_T0069423.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27472304 27483492 + MGP_WSBEiJ_P0069423 Dnajb6 protein_coding protein_coding MGP_WSBEiJ_T0069424.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27486083 27488100 + Dnajb6 protein_coding retained_intron MGP_WSBEiJ_T0069425.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27489701 27493317 + Dnajb6 protein_coding processed_transcript MGP_WSBEiJ_T0069426.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27499535 27500980 + Dnajb6 protein_coding retained_intron MGP_WSBEiJ_T0069427.1 MGP_WSBEiJ_G0028568.1 mouse_genomes_project 5 27499829 27518870 + MGP_WSBEiJ_P0069427 Dnajb6 protein_coding protein_coding MGP_WSBEiJ_T0097422.1 MGP_WSBEiJ_G0036096.1 mouse_genomes_project 5 124965988 124972358 + sense_intronic sense_intronic MGP_WSBEiJ_T0014614.1 MGP_WSBEiJ_G0012744.1 mouse_genomes_project 5 87698539 87698948 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014525.1 MGP_WSBEiJ_G0012655.1 mouse_genomes_project 5 43903572 43904197 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069376.1 MGP_WSBEiJ_G0028558.1 mouse_genomes_project 5 25848885 25856166 + MGP_WSBEiJ_P0069376 En2 protein_coding protein_coding MGP_WSBEiJ_T0014502.1 MGP_WSBEiJ_G0012632.1 mouse_genomes_project 5 31017556 31018016 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074386.1 MGP_WSBEiJ_G0029491.1 mouse_genomes_project 5 146613783 146616576 + Wipi2 protein_coding retained_intron MGP_WSBEiJ_T0074387.1 MGP_WSBEiJ_G0029491.1 mouse_genomes_project 5 146615627 146658388 + MGP_WSBEiJ_P0074387 Wipi2 protein_coding protein_coding MGP_WSBEiJ_T0074388.1 MGP_WSBEiJ_G0029491.1 mouse_genomes_project 5 146615676 146650509 + Wipi2 protein_coding retained_intron MGP_WSBEiJ_T0074389.1 MGP_WSBEiJ_G0029491.1 mouse_genomes_project 5 146615678 146655287 + MGP_WSBEiJ_P0074389 Wipi2 protein_coding protein_coding MGP_WSBEiJ_T0074390.1 MGP_WSBEiJ_G0029491.1 mouse_genomes_project 5 146650313 146652444 + Wipi2 protein_coding retained_intron MGP_WSBEiJ_T0010562.1 MGP_WSBEiJ_G0008719.1 mouse_genomes_project 5 143112602 143112698 - Mir339 miRNA miRNA MGP_WSBEiJ_T0074420.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147014837 147137136 - MGP_WSBEiJ_P0074420 Rnf216 protein_coding protein_coding MGP_WSBEiJ_T0074421.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147015765 147137122 - MGP_WSBEiJ_P0074421 Rnf216 protein_coding protein_coding MGP_WSBEiJ_T0074422.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147016562 147122715 - MGP_WSBEiJ_P0074422 Rnf216 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074423.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147016594 147122715 - MGP_WSBEiJ_P0074423 Rnf216 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074424.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147036476 147037878 - Rnf216 protein_coding retained_intron MGP_WSBEiJ_T0074425.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147091255 147137122 - Rnf216 protein_coding retained_intron MGP_WSBEiJ_T0074426.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147105247 147112061 - Rnf216 protein_coding retained_intron MGP_WSBEiJ_T0074427.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147114508 147137122 - Rnf216 protein_coding processed_transcript MGP_WSBEiJ_T0074428.1 MGP_WSBEiJ_G0029497.1 mouse_genomes_project 5 147114697 147137124 - Rnf216 protein_coding processed_transcript MGP_WSBEiJ_T0074732.1 MGP_WSBEiJ_G0029568.1 mouse_genomes_project 5 152302218 152319919 - MGP_WSBEiJ_P0074732 Slc46a3 protein_coding protein_coding MGP_WSBEiJ_T0074733.1 MGP_WSBEiJ_G0029568.1 mouse_genomes_project 5 152302222 152319919 - MGP_WSBEiJ_P0074733 Slc46a3 protein_coding protein_coding MGP_WSBEiJ_T0074734.1 MGP_WSBEiJ_G0029568.1 mouse_genomes_project 5 152302340 152303813 - Slc46a3 protein_coding retained_intron MGP_WSBEiJ_T0074735.1 MGP_WSBEiJ_G0029568.1 mouse_genomes_project 5 152318985 152319919 - MGP_WSBEiJ_P0074735 Slc46a3 protein_coding protein_coding MGP_WSBEiJ_T0098390.1 MGP_WSBEiJ_G0037053.1 mouse_genomes_project 5 139304829 139304936 + Gm22450 snRNA snRNA MGP_WSBEiJ_T0001434.1 MGP_WSBEiJ_G0001362.1 mouse_genomes_project 5 20853059 20853844 + TEC TEC MGP_WSBEiJ_T0097438.1 MGP_WSBEiJ_G0036108.1 mouse_genomes_project 5 155191358 155195406 + Gm42531 sense_intronic sense_intronic MGP_WSBEiJ_T0017529.1 MGP_WSBEiJ_G0015011.1 mouse_genomes_project 5 22694934 22696907 + 2900005J15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017530.1 MGP_WSBEiJ_G0015011.1 mouse_genomes_project 5 22695409 22704016 + 2900005J15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0074254.1 MGP_WSBEiJ_G0029459.1 mouse_genomes_project 5 143121898 143124255 + Gpr146 protein_coding processed_transcript MGP_WSBEiJ_T0074255.1 MGP_WSBEiJ_G0029459.1 mouse_genomes_project 5 143121943 143124256 + Gpr146 protein_coding processed_transcript MGP_WSBEiJ_T0074256.1 MGP_WSBEiJ_G0029459.1 mouse_genomes_project 5 143122364 143138469 + MGP_WSBEiJ_P0074256 Gpr146 protein_coding protein_coding MGP_WSBEiJ_T0074257.1 MGP_WSBEiJ_G0029459.1 mouse_genomes_project 5 143122421 143123461 + MGP_WSBEiJ_P0074257 Gpr146 protein_coding protein_coding MGP_WSBEiJ_T0074258.1 MGP_WSBEiJ_G0029459.1 mouse_genomes_project 5 143124782 143142121 + MGP_WSBEiJ_P0074258 Gpr146 protein_coding protein_coding MGP_WSBEiJ_T0074259.1 MGP_WSBEiJ_G0029459.1 mouse_genomes_project 5 143133977 143142120 + MGP_WSBEiJ_P0074259 Gpr146 protein_coding protein_coding MGP_WSBEiJ_T0001830.1 MGP_WSBEiJ_G0001751.1 mouse_genomes_project 5 135967905 135968193 + TEC TEC MGP_WSBEiJ_T0010522.1 MGP_WSBEiJ_G0008679.1 mouse_genomes_project 5 83341533 83341616 + Gm44303 miRNA miRNA MGP_WSBEiJ_T0070073.1 MGP_WSBEiJ_G0028666.1 mouse_genomes_project 5 33271953 33275398 + MGP_WSBEiJ_P0070073 Adra2c protein_coding protein_coding MGP_WSBEiJ_T0074429.1 MGP_WSBEiJ_G0029498.1 mouse_genomes_project 5 147200923 147209466 - MGP_WSBEiJ_P0074429 Rbak protein_coding protein_coding MGP_WSBEiJ_T0074430.1 MGP_WSBEiJ_G0029498.1 mouse_genomes_project 5 147200923 147209511 - MGP_WSBEiJ_P0074430 Rbak protein_coding protein_coding MGP_WSBEiJ_T0074431.1 MGP_WSBEiJ_G0029498.1 mouse_genomes_project 5 147200924 147205472 - Rbak protein_coding retained_intron MGP_WSBEiJ_T0074432.1 MGP_WSBEiJ_G0029498.1 mouse_genomes_project 5 147207703 147209468 - Rbak protein_coding retained_intron MGP_WSBEiJ_T0014494.1 MGP_WSBEiJ_G0012624.1 mouse_genomes_project 5 28785802 28791215 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001510.1 MGP_WSBEiJ_G0001435.1 mouse_genomes_project 5 44100435 44101557 + TEC TEC MGP_WSBEiJ_T0004625.1 MGP_WSBEiJ_G0004001.1 mouse_genomes_project 5 66206888 66207439 - Gm15949 antisense antisense MGP_WSBEiJ_T0100847.1 MGP_WSBEiJ_G0039305.1 mouse_genomes_project 5 271075 271243 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014584.1 MGP_WSBEiJ_G0012714.1 mouse_genomes_project 5 71693694 71694209 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099586.1 MGP_WSBEiJ_G0038249.1 mouse_genomes_project 5 37662964 37663093 - Gm25377 snoRNA snoRNA MGP_WSBEiJ_T0100095.1 MGP_WSBEiJ_G0038701.1 mouse_genomes_project 5 20336015 20336578 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0014674.1 MGP_WSBEiJ_G0012804.1 mouse_genomes_project 5 110751030 110751614 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001525.1 MGP_WSBEiJ_G0001449.1 mouse_genomes_project 5 47289201 47291148 - TEC TEC MGP_WSBEiJ_T0073086.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126387637 126410185 - MGP_WSBEiJ_P0073086 Zcchc8 protein_coding protein_coding MGP_WSBEiJ_T0073087.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126387645 126410129 - MGP_WSBEiJ_P0073087 Zcchc8 protein_coding protein_coding MGP_WSBEiJ_T0073088.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126389142 126392762 - Zcchc8 protein_coding retained_intron MGP_WSBEiJ_T0073089.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126393876 126408600 - MGP_WSBEiJ_P0073089 Zcchc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073090.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126393893 126397838 - Zcchc8 protein_coding retained_intron MGP_WSBEiJ_T0073091.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126397643 126403166 - MGP_WSBEiJ_P0073091 Zcchc8 protein_coding protein_coding MGP_WSBEiJ_T0073092.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126398550 126409908 - MGP_WSBEiJ_P0073092 Zcchc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073093.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126400095 126409947 - MGP_WSBEiJ_P0073093 Zcchc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073094.1 MGP_WSBEiJ_G0029254.1 mouse_genomes_project 5 126403174 126409859 - MGP_WSBEiJ_P0073094 Zcchc8 protein_coding protein_coding MGP_WSBEiJ_T0072593.1 MGP_WSBEiJ_G0029166.1 mouse_genomes_project 5 119371431 119382019 + Wsb2 protein_coding retained_intron MGP_WSBEiJ_T0072594.1 MGP_WSBEiJ_G0029166.1 mouse_genomes_project 5 119371530 119394294 + MGP_WSBEiJ_P0072594 Wsb2 protein_coding protein_coding MGP_WSBEiJ_T0072595.1 MGP_WSBEiJ_G0029166.1 mouse_genomes_project 5 119376282 119386158 + Wsb2 protein_coding processed_transcript MGP_WSBEiJ_T0072596.1 MGP_WSBEiJ_G0029166.1 mouse_genomes_project 5 119391195 119392935 + Wsb2 protein_coding retained_intron MGP_WSBEiJ_T0001713.1 MGP_WSBEiJ_G0001635.1 mouse_genomes_project 5 112458919 112459472 + TEC TEC MGP_WSBEiJ_T0014590.1 MGP_WSBEiJ_G0012720.1 mouse_genomes_project 5 74485811 74487360 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004586.1 MGP_WSBEiJ_G0003971.1 mouse_genomes_project 5 32623664 32625424 + Gm15522 antisense antisense MGP_WSBEiJ_T0100114.1 MGP_WSBEiJ_G0038715.1 mouse_genomes_project 5 86030913 86031913 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100115.1 MGP_WSBEiJ_G0038715.1 mouse_genomes_project 5 86030968 86032052 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0011404.1 MGP_WSBEiJ_G0009561.1 mouse_genomes_project 5 110951080 110951165 + Gm28000 misc_RNA misc_RNA MGP_WSBEiJ_T0070315.1 MGP_WSBEiJ_G0028712.1 mouse_genomes_project 5 41837542 41932101 + MGP_WSBEiJ_P0070315 Cc2d2a protein_coding protein_coding MGP_WSBEiJ_T0070316.1 MGP_WSBEiJ_G0028712.1 mouse_genomes_project 5 41852169 41868939 + Cc2d2a protein_coding retained_intron MGP_WSBEiJ_T0070317.1 MGP_WSBEiJ_G0028712.1 mouse_genomes_project 5 41852169 41930445 + MGP_WSBEiJ_P0070317 Cc2d2a protein_coding protein_coding MGP_WSBEiJ_T0070318.1 MGP_WSBEiJ_G0028712.1 mouse_genomes_project 5 41880739 41903562 + Cc2d2a protein_coding retained_intron MGP_WSBEiJ_T0001417.1 MGP_WSBEiJ_G0001345.1 mouse_genomes_project 5 11327362 11330244 + TEC TEC MGP_WSBEiJ_T0014697.1 MGP_WSBEiJ_G0012827.1 mouse_genomes_project 5 122895879 122896090 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0069651.1 MGP_WSBEiJ_G0028606.1 mouse_genomes_project 5 28958765 28962088 - MGP_WSBEiJ_P0069651 Zfp513 protein_coding protein_coding MGP_WSBEiJ_T0069652.1 MGP_WSBEiJ_G0028606.1 mouse_genomes_project 5 28958767 28961827 - MGP_WSBEiJ_P0069652 Zfp513 protein_coding protein_coding MGP_WSBEiJ_T0069653.1 MGP_WSBEiJ_G0028606.1 mouse_genomes_project 5 28959284 28960546 - Zfp513 protein_coding processed_transcript MGP_WSBEiJ_T0069654.1 MGP_WSBEiJ_G0028606.1 mouse_genomes_project 5 28959565 28960071 - MGP_WSBEiJ_P0069654 Zfp513 protein_coding protein_coding MGP_WSBEiJ_T0069655.1 MGP_WSBEiJ_G0028606.1 mouse_genomes_project 5 28959665 28960547 - Zfp513 protein_coding processed_transcript MGP_WSBEiJ_T0069656.1 MGP_WSBEiJ_G0028606.1 mouse_genomes_project 5 28959773 28960547 - Zfp513 protein_coding processed_transcript MGP_WSBEiJ_T0069657.1 MGP_WSBEiJ_G0028606.1 mouse_genomes_project 5 28960453 28962000 - MGP_WSBEiJ_P0069657 Zfp513 protein_coding protein_coding MGP_WSBEiJ_T0069658.1 MGP_WSBEiJ_G0028606.1 mouse_genomes_project 5 28960540 28962010 - MGP_WSBEiJ_P0069658 Zfp513 protein_coding protein_coding MGP_WSBEiJ_T0004772.1 MGP_WSBEiJ_G0004106.1 mouse_genomes_project 5 138000870 138004528 + Gm10369 antisense antisense MGP_WSBEiJ_T0001616.1 MGP_WSBEiJ_G0001539.1 mouse_genomes_project 5 65887331 65889849 + TEC TEC MGP_WSBEiJ_T0073416.1 MGP_WSBEiJ_G0029309.1 mouse_genomes_project 5 132852116 132869827 + MGP_WSBEiJ_P0073416 Sumf2 protein_coding protein_coding MGP_WSBEiJ_T0073417.1 MGP_WSBEiJ_G0029309.1 mouse_genomes_project 5 132852141 132859886 + MGP_WSBEiJ_P0073417 Sumf2 protein_coding protein_coding MGP_WSBEiJ_T0073418.1 MGP_WSBEiJ_G0029309.1 mouse_genomes_project 5 132852150 132859976 + Sumf2 protein_coding processed_transcript MGP_WSBEiJ_T0073419.1 MGP_WSBEiJ_G0029309.1 mouse_genomes_project 5 132852150 132868508 + MGP_WSBEiJ_P0073419 Sumf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073420.1 MGP_WSBEiJ_G0029309.1 mouse_genomes_project 5 132857570 132867874 + Sumf2 protein_coding processed_transcript MGP_WSBEiJ_T0073421.1 MGP_WSBEiJ_G0029309.1 mouse_genomes_project 5 132857570 132867874 + Sumf2 protein_coding processed_transcript MGP_WSBEiJ_T0073791.1 MGP_WSBEiJ_G0029374.1 mouse_genomes_project 5 139486133 139494092 + MGP_WSBEiJ_P0073791 Upk3b protein_coding protein_coding MGP_WSBEiJ_T0007953.1 MGP_WSBEiJ_G0006495.1 mouse_genomes_project 5 29354122 29362377 - Gm43660 lincRNA lincRNA MGP_WSBEiJ_T0070840.1 MGP_WSBEiJ_G0028799.1 mouse_genomes_project 5 71573210 71794762 - MGP_WSBEiJ_P0070840 Corin protein_coding protein_coding MGP_WSBEiJ_T0070841.1 MGP_WSBEiJ_G0028799.1 mouse_genomes_project 5 71573211 71794497 - MGP_WSBEiJ_P0070841 Corin protein_coding protein_coding MGP_WSBEiJ_T0070842.1 MGP_WSBEiJ_G0028799.1 mouse_genomes_project 5 71574669 71794722 - MGP_WSBEiJ_P0070842 Corin protein_coding protein_coding MGP_WSBEiJ_T0070843.1 MGP_WSBEiJ_G0028799.1 mouse_genomes_project 5 71574669 71794728 - MGP_WSBEiJ_P0070843 Corin protein_coding protein_coding MGP_WSBEiJ_T0070844.1 MGP_WSBEiJ_G0028799.1 mouse_genomes_project 5 71574681 71794728 - MGP_WSBEiJ_P0070844 Corin protein_coding protein_coding MGP_WSBEiJ_T0070845.1 MGP_WSBEiJ_G0028799.1 mouse_genomes_project 5 71634448 71641577 - Corin protein_coding retained_intron MGP_WSBEiJ_T0070846.1 MGP_WSBEiJ_G0028799.1 mouse_genomes_project 5 71639249 71661166 - Corin protein_coding processed_transcript MGP_WSBEiJ_T0073253.1 MGP_WSBEiJ_G0029279.1 mouse_genomes_project 5 127383328 127392980 + Atp6v0a2 protein_coding processed_transcript MGP_WSBEiJ_T0073254.1 MGP_WSBEiJ_G0029279.1 mouse_genomes_project 5 127383803 127421234 + MGP_WSBEiJ_P0073254 Atp6v0a2 protein_coding protein_coding MGP_WSBEiJ_T0073255.1 MGP_WSBEiJ_G0029279.1 mouse_genomes_project 5 127383816 127418919 + MGP_WSBEiJ_P0073255 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073256.1 MGP_WSBEiJ_G0029279.1 mouse_genomes_project 5 127383920 127396995 + Atp6v0a2 protein_coding retained_intron MGP_WSBEiJ_T0073257.1 MGP_WSBEiJ_G0029279.1 mouse_genomes_project 5 127409277 127412877 + Atp6v0a2 protein_coding processed_transcript MGP_WSBEiJ_T0073258.1 MGP_WSBEiJ_G0029279.1 mouse_genomes_project 5 127410837 127420380 + Atp6v0a2 protein_coding retained_intron MGP_WSBEiJ_T0073259.1 MGP_WSBEiJ_G0029279.1 mouse_genomes_project 5 127413180 127418596 + MGP_WSBEiJ_P0073259 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073861.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140237899 140401055 - MGP_WSBEiJ_P0073861 Col26a1 protein_coding protein_coding MGP_WSBEiJ_T0073862.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140237899 140401118 - MGP_WSBEiJ_P0073862 Col26a1 protein_coding protein_coding MGP_WSBEiJ_T0073863.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140238895 140240686 - Col26a1 protein_coding retained_intron MGP_WSBEiJ_T0073864.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140239214 140243838 - Col26a1 protein_coding retained_intron MGP_WSBEiJ_T0073865.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140249663 140400844 - Col26a1 protein_coding retained_intron MGP_WSBEiJ_T0073866.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140250382 140251529 - Col26a1 protein_coding retained_intron MGP_WSBEiJ_T0073867.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140253625 140401143 - Col26a1 protein_coding retained_intron MGP_WSBEiJ_T0073868.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140253799 140274966 - Col26a1 protein_coding processed_transcript MGP_WSBEiJ_T0073869.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140262680 140400677 - Col26a1 protein_coding processed_transcript MGP_WSBEiJ_T0073870.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140351002 140353419 - Col26a1 protein_coding retained_intron MGP_WSBEiJ_T0073871.1 MGP_WSBEiJ_G0029385.1 mouse_genomes_project 5 140351782 140400864 - Col26a1 protein_coding retained_intron MGP_WSBEiJ_T0001815.1 MGP_WSBEiJ_G0001736.1 mouse_genomes_project 5 135052958 135053706 - TEC TEC MGP_WSBEiJ_T0014562.1 MGP_WSBEiJ_G0012692.1 mouse_genomes_project 5 60664619 60665261 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004769.1 MGP_WSBEiJ_G0004103.1 mouse_genomes_project 5 135103292 135113473 + Gm42439 antisense antisense MGP_WSBEiJ_T0069576.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28803800 28829416 + MGP_WSBEiJ_P0069576 Cad protein_coding protein_coding MGP_WSBEiJ_T0069577.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28803831 28818652 + MGP_WSBEiJ_P0069577 Cad protein_coding protein_coding MGP_WSBEiJ_T0069578.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28803948 28829169 + MGP_WSBEiJ_P0069578 Cad protein_coding protein_coding MGP_WSBEiJ_T0069579.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28803948 28829169 + MGP_WSBEiJ_P0069579 Cad protein_coding protein_coding MGP_WSBEiJ_T0069580.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28803975 28829132 + MGP_WSBEiJ_P0069580 Cad protein_coding protein_coding MGP_WSBEiJ_T0069581.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28808434 28809725 + Cad protein_coding retained_intron MGP_WSBEiJ_T0069582.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28811554 28817857 + Cad protein_coding retained_intron MGP_WSBEiJ_T0069583.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28817183 28818069 + Cad protein_coding processed_transcript MGP_WSBEiJ_T0069584.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28821244 28823083 + Cad protein_coding processed_transcript MGP_WSBEiJ_T0069585.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28821357 28823594 + Cad protein_coding retained_intron MGP_WSBEiJ_T0069586.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28821443 28823871 + Cad protein_coding retained_intron MGP_WSBEiJ_T0069587.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28823197 28824469 + Cad protein_coding retained_intron MGP_WSBEiJ_T0069588.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28825005 28826917 + MGP_WSBEiJ_P0069588 Cad protein_coding protein_coding MGP_WSBEiJ_T0069589.1 MGP_WSBEiJ_G0028596.1 mouse_genomes_project 5 28826701 28827554 + Cad protein_coding retained_intron MGP_WSBEiJ_T0004686.1 MGP_WSBEiJ_G0004043.1 mouse_genomes_project 5 108498232 108525268 - Gm17202 antisense antisense MGP_WSBEiJ_T0097061.1 MGP_WSBEiJ_G0035742.1 mouse_genomes_project 5 21151472 21151565 - Gm24009 rRNA rRNA MGP_WSBEiJ_T0014522.1 MGP_WSBEiJ_G0012652.1 mouse_genomes_project 5 42118888 42120645 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014486.1 MGP_WSBEiJ_G0012616.1 mouse_genomes_project 5 25752282 25755582 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014473.1 MGP_WSBEiJ_G0012603.1 mouse_genomes_project 5 23032977 23033227 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008131.1 MGP_WSBEiJ_G0006631.1 mouse_genomes_project 5 109516804 109520499 + Gm43082 lincRNA lincRNA MGP_WSBEiJ_T0074400.1 MGP_WSBEiJ_G0029494.1 mouse_genomes_project 5 146869003 146901667 - MGP_WSBEiJ_P0074400 Fbxl18 protein_coding protein_coding MGP_WSBEiJ_T0074401.1 MGP_WSBEiJ_G0029494.1 mouse_genomes_project 5 146873860 146874969 - Fbxl18 protein_coding retained_intron MGP_WSBEiJ_T0074402.1 MGP_WSBEiJ_G0029494.1 mouse_genomes_project 5 146873873 146901484 - MGP_WSBEiJ_P0074402 Fbxl18 protein_coding protein_coding MGP_WSBEiJ_T0074403.1 MGP_WSBEiJ_G0029494.1 mouse_genomes_project 5 146874136 146874578 - Fbxl18 protein_coding processed_transcript MGP_WSBEiJ_T0074404.1 MGP_WSBEiJ_G0029494.1 mouse_genomes_project 5 146884310 146901667 - Fbxl18 protein_coding retained_intron MGP_WSBEiJ_T0072917.1 MGP_WSBEiJ_G0029230.1 mouse_genomes_project 5 125014998 125064518 - MGP_WSBEiJ_P0072917 Atp2a2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0072918.1 MGP_WSBEiJ_G0029230.1 mouse_genomes_project 5 125014999 125064734 - MGP_WSBEiJ_P0072918 Atp2a2 protein_coding protein_coding MGP_WSBEiJ_T0072919.1 MGP_WSBEiJ_G0029230.1 mouse_genomes_project 5 125050701 125064454 - Atp2a2 protein_coding processed_transcript MGP_WSBEiJ_T0072920.1 MGP_WSBEiJ_G0029230.1 mouse_genomes_project 5 125050754 125064450 - Atp2a2 protein_coding retained_intron MGP_WSBEiJ_T0001836.1 MGP_WSBEiJ_G0001756.1 mouse_genomes_project 5 137781631 137785864 - TEC TEC MGP_WSBEiJ_T0004591.1 MGP_WSBEiJ_G0003976.1 mouse_genomes_project 5 34782320 34784140 + Gm43701 antisense antisense MGP_WSBEiJ_T0072530.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117765494 117849301 + Cit protein_coding retained_intron MGP_WSBEiJ_T0072531.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117765496 117794842 + MGP_WSBEiJ_P0072531 Cit protein_coding protein_coding MGP_WSBEiJ_T0072532.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117765497 117794860 + MGP_WSBEiJ_P0072532 Cit protein_coding protein_coding MGP_WSBEiJ_T0072533.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117765860 117849308 + Cit protein_coding retained_intron MGP_WSBEiJ_T0072534.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117765860 117932642 + MGP_WSBEiJ_P0072534 Cit protein_coding protein_coding MGP_WSBEiJ_T0072535.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117765860 117936139 + MGP_WSBEiJ_P0072535 Cit protein_coding protein_coding MGP_WSBEiJ_T0072536.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117766587 117932617 + MGP_WSBEiJ_P0072536 Cit protein_coding protein_coding MGP_WSBEiJ_T0072537.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117766587 117932617 + MGP_WSBEiJ_P0072537 Cit protein_coding protein_coding MGP_WSBEiJ_T0072538.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117766677 117774963 + Cit protein_coding processed_transcript MGP_WSBEiJ_T0072539.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117771248 117784094 + Cit protein_coding retained_intron MGP_WSBEiJ_T0072540.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117808263 117809442 + Cit protein_coding retained_intron MGP_WSBEiJ_T0072541.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117831147 117932617 + MGP_WSBEiJ_P0072541 Cit protein_coding unknown_likely_coding MGP_WSBEiJ_T0072542.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117831310 117849199 + Cit protein_coding retained_intron MGP_WSBEiJ_T0072543.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117849239 117933072 + Cit protein_coding processed_transcript MGP_WSBEiJ_T0072544.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117849682 117932657 + Cit protein_coding processed_transcript MGP_WSBEiJ_T0072545.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117857236 117870540 + Cit protein_coding processed_transcript MGP_WSBEiJ_T0072546.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117868904 117924101 + Cit protein_coding retained_intron MGP_WSBEiJ_T0072547.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117874683 117876243 + Cit protein_coding processed_transcript MGP_WSBEiJ_T0072548.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117891599 117932654 + MGP_WSBEiJ_P0072548 Cit protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072549.1 MGP_WSBEiJ_G0029156.1 mouse_genomes_project 5 117911804 117915438 + Cit protein_coding retained_intron MGP_WSBEiJ_T0072188.1 MGP_WSBEiJ_G0029091.1 mouse_genomes_project 5 114276259 114495230 - MGP_WSBEiJ_P0072188 Myo18b protein_coding protein_coding MGP_WSBEiJ_T0072189.1 MGP_WSBEiJ_G0029091.1 mouse_genomes_project 5 114276261 114353641 - Myo18b protein_coding processed_transcript MGP_WSBEiJ_T0072190.1 MGP_WSBEiJ_G0029091.1 mouse_genomes_project 5 114362511 114469575 - Myo18b protein_coding processed_transcript MGP_WSBEiJ_T0072191.1 MGP_WSBEiJ_G0029091.1 mouse_genomes_project 5 114412394 114470485 - MGP_WSBEiJ_P0072191 Myo18b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010555.1 MGP_WSBEiJ_G0008712.1 mouse_genomes_project 5 140833936 140834033 + Mir8116 miRNA miRNA MGP_WSBEiJ_T0008007.1 MGP_WSBEiJ_G0006534.1 mouse_genomes_project 5 52883834 52895603 + Gm10440 lincRNA lincRNA MGP_WSBEiJ_T0068827.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 790932 818823 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0068828.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 791056 825040 + MGP_WSBEiJ_P0068828 Akap9 protein_coding protein_coding MGP_WSBEiJ_T0068829.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 791152 813034 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0068830.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 791152 940176 + MGP_WSBEiJ_P0068830 Akap9 protein_coding protein_coding MGP_WSBEiJ_T0068831.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 815347 821713 + Akap9 protein_coding processed_transcript MGP_WSBEiJ_T0068832.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 815358 815939 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0068833.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 818772 821769 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0068834.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 835667 845003 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0068835.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 839317 840233 + MGP_WSBEiJ_P0068835 Akap9 protein_coding protein_coding MGP_WSBEiJ_T0068836.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 892931 895102 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0068837.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 918120 919796 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0068838.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 923239 924242 + MGP_WSBEiJ_P0068838 Akap9 protein_coding protein_coding MGP_WSBEiJ_T0068839.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 923361 923840 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0068840.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 924161 929308 + MGP_WSBEiJ_P0068840 Akap9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068841.1 MGP_WSBEiJ_G0028461.1 mouse_genomes_project 5 926350 926816 + Akap9 protein_coding retained_intron MGP_WSBEiJ_T0098339.1 MGP_WSBEiJ_G0037002.1 mouse_genomes_project 5 36640165 36640301 + Gm22249 snRNA snRNA MGP_WSBEiJ_T0071940.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109739439 109761622 - MGP_WSBEiJ_P0071940 Gak protein_coding protein_coding MGP_WSBEiJ_T0071941.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109739442 109802951 - MGP_WSBEiJ_P0071941 Gak protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071942.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109739442 109802951 - MGP_WSBEiJ_P0071942 Gak protein_coding protein_coding MGP_WSBEiJ_T0071943.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109739448 109802951 - MGP_WSBEiJ_P0071943 Gak protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071944.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109740201 109741897 - Gak protein_coding retained_intron MGP_WSBEiJ_T0071945.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109741459 109802967 - MGP_WSBEiJ_P0071945 Gak protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071946.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109742002 109747271 - Gak protein_coding processed_transcript MGP_WSBEiJ_T0071947.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109746927 109750994 - Gak protein_coding retained_intron MGP_WSBEiJ_T0071948.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109750114 109798261 - Gak protein_coding retained_intron MGP_WSBEiJ_T0071949.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109753130 109761658 - MGP_WSBEiJ_P0071949 Gak protein_coding protein_coding MGP_WSBEiJ_T0071950.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109754405 109766706 - MGP_WSBEiJ_P0071950 Gak protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071951.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109785868 109802635 - Gak protein_coding processed_transcript MGP_WSBEiJ_T0071952.1 MGP_WSBEiJ_G0029044.1 mouse_genomes_project 5 109796482 109802905 - MGP_WSBEiJ_P0071952 Gak protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001541.1 MGP_WSBEiJ_G0001465.1 mouse_genomes_project 5 48286233 48287383 - TEC TEC MGP_WSBEiJ_T0008342.1 MGP_WSBEiJ_G0006770.1 mouse_genomes_project 5 155124339 155126731 - Gm5 lincRNA lincRNA MGP_WSBEiJ_T0008343.1 MGP_WSBEiJ_G0006770.1 mouse_genomes_project 5 155124407 155126902 - Gm5 lincRNA lincRNA MGP_WSBEiJ_T0074635.1 MGP_WSBEiJ_G0029545.1 mouse_genomes_project 5 150194321 150207741 - MGP_WSBEiJ_P0074635 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0074636.1 MGP_WSBEiJ_G0029545.1 mouse_genomes_project 5 150200501 150207741 - MGP_WSBEiJ_P0074636 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0004773.1 MGP_WSBEiJ_G0004107.1 mouse_genomes_project 5 138077206 138168325 + Gm43278 antisense antisense MGP_WSBEiJ_T0011394.1 MGP_WSBEiJ_G0009551.1 mouse_genomes_project 5 37479690 37479936 + Gm25505 misc_RNA misc_RNA MGP_WSBEiJ_T0014709.1 MGP_WSBEiJ_G0012839.1 mouse_genomes_project 5 128630876 128631665 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071163.1 MGP_WSBEiJ_G0028853.1 mouse_genomes_project 5 86035905 86070428 + MGP_WSBEiJ_P0071163 Stap1 protein_coding protein_coding MGP_WSBEiJ_T0071164.1 MGP_WSBEiJ_G0028853.1 mouse_genomes_project 5 86035909 86062059 + Stap1 protein_coding retained_intron MGP_WSBEiJ_T0071165.1 MGP_WSBEiJ_G0028853.1 mouse_genomes_project 5 86035933 86051734 + Stap1 protein_coding retained_intron MGP_WSBEiJ_T0071166.1 MGP_WSBEiJ_G0028853.1 mouse_genomes_project 5 86035942 86051730 + Stap1 protein_coding retained_intron MGP_WSBEiJ_T0071167.1 MGP_WSBEiJ_G0028853.1 mouse_genomes_project 5 86035971 86068229 + MGP_WSBEiJ_P0071167 Stap1 protein_coding protein_coding MGP_WSBEiJ_T0071168.1 MGP_WSBEiJ_G0028853.1 mouse_genomes_project 5 86052183 86059121 + Stap1 protein_coding retained_intron MGP_WSBEiJ_T0014411.1 MGP_WSBEiJ_G0012541.1 mouse_genomes_project 5 845646 847361 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001564.1 MGP_WSBEiJ_G0001488.1 mouse_genomes_project 5 56462016 56464604 + TEC TEC MGP_WSBEiJ_T0074838.1 MGP_WSBEiJ_G0029584.1 mouse_genomes_project 5 155131651 155142802 - MGP_WSBEiJ_P0074838 Zar1l protein_coding protein_coding MGP_WSBEiJ_T0004680.1 MGP_WSBEiJ_G0004039.1 mouse_genomes_project 5 104370399 104390648 - Gm42620 antisense antisense MGP_WSBEiJ_T0073952.1 MGP_WSBEiJ_G0029402.1 mouse_genomes_project 5 140897353 140921792 + MGP_WSBEiJ_P0073952 Ephb4 protein_coding protein_coding MGP_WSBEiJ_T0073953.1 MGP_WSBEiJ_G0029402.1 mouse_genomes_project 5 140897385 140927393 + MGP_WSBEiJ_P0073953 Ephb4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073954.1 MGP_WSBEiJ_G0029402.1 mouse_genomes_project 5 140897416 140921784 + MGP_WSBEiJ_P0073954 Ephb4 protein_coding protein_coding MGP_WSBEiJ_T0073955.1 MGP_WSBEiJ_G0029402.1 mouse_genomes_project 5 140897674 140921574 + MGP_WSBEiJ_P0073955 Ephb4 protein_coding protein_coding MGP_WSBEiJ_T0073956.1 MGP_WSBEiJ_G0029402.1 mouse_genomes_project 5 140897757 140921796 + MGP_WSBEiJ_P0073956 Ephb4 protein_coding protein_coding MGP_WSBEiJ_T0010553.1 MGP_WSBEiJ_G0008710.1 mouse_genomes_project 5 139856461 139856549 - Mir721 miRNA miRNA MGP_WSBEiJ_T0069729.1 MGP_WSBEiJ_G0028617.1 mouse_genomes_project 5 29306822 29317923 - MGP_WSBEiJ_P0069729 Supt7l protein_coding protein_coding MGP_WSBEiJ_T0069730.1 MGP_WSBEiJ_G0028617.1 mouse_genomes_project 5 29307649 29317885 - MGP_WSBEiJ_P0069730 Supt7l protein_coding protein_coding MGP_WSBEiJ_T0069731.1 MGP_WSBEiJ_G0028617.1 mouse_genomes_project 5 29312704 29318961 - Supt7l protein_coding retained_intron MGP_WSBEiJ_T0069732.1 MGP_WSBEiJ_G0028617.1 mouse_genomes_project 5 29316610 29317856 - Supt7l protein_coding retained_intron MGP_WSBEiJ_T0074229.1 MGP_WSBEiJ_G0029454.1 mouse_genomes_project 5 142982411 143000149 + MGP_WSBEiJ_P0074229 Get4 protein_coding protein_coding MGP_WSBEiJ_T0074230.1 MGP_WSBEiJ_G0029454.1 mouse_genomes_project 5 142982457 142997239 + MGP_WSBEiJ_P0074230 Get4 protein_coding protein_coding MGP_WSBEiJ_T0074231.1 MGP_WSBEiJ_G0029454.1 mouse_genomes_project 5 142983584 142997332 + MGP_WSBEiJ_P0074231 Get4 protein_coding protein_coding MGP_WSBEiJ_T0074232.1 MGP_WSBEiJ_G0029454.1 mouse_genomes_project 5 142983598 142999427 + MGP_WSBEiJ_P0074232 Get4 protein_coding protein_coding MGP_WSBEiJ_T0074233.1 MGP_WSBEiJ_G0029454.1 mouse_genomes_project 5 142996964 142997536 + Get4 protein_coding retained_intron MGP_WSBEiJ_T0074234.1 MGP_WSBEiJ_G0029454.1 mouse_genomes_project 5 142997028 142999800 + Get4 protein_coding retained_intron MGP_WSBEiJ_T0001851.1 MGP_WSBEiJ_G0001771.1 mouse_genomes_project 5 145211591 145212552 - TEC TEC MGP_WSBEiJ_T0071838.1 MGP_WSBEiJ_G0029022.1 mouse_genomes_project 5 108524906 108528397 + MGP_WSBEiJ_P0071838 Lpcat2b protein_coding protein_coding MGP_WSBEiJ_T0069058.1 MGP_WSBEiJ_G0028495.1 mouse_genomes_project 5 15168687 15230444 + MGP_WSBEiJ_P0069058 Gnat3 protein_coding protein_coding MGP_WSBEiJ_T0014645.1 MGP_WSBEiJ_G0012775.1 mouse_genomes_project 5 103240766 103241498 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072841.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124362884 124368772 - Cux2 protein_coding retained_intron MGP_WSBEiJ_T0072842.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124363171 124449318 - MGP_WSBEiJ_P0072842 Cux2 protein_coding protein_coding MGP_WSBEiJ_T0072843.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124377243 124378479 - Cux2 protein_coding retained_intron MGP_WSBEiJ_T0072844.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124383964 124427816 - Cux2 protein_coding processed_transcript MGP_WSBEiJ_T0072845.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124383970 124402138 - Cux2 protein_coding processed_transcript MGP_WSBEiJ_T0072846.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124391410 124583865 - MGP_WSBEiJ_P0072846 Cux2 protein_coding protein_coding MGP_WSBEiJ_T0072847.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124394078 124531841 - MGP_WSBEiJ_P0072847 Cux2 protein_coding protein_coding MGP_WSBEiJ_T0072848.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124402165 124429478 - Cux2 protein_coding processed_transcript MGP_WSBEiJ_T0072849.1 MGP_WSBEiJ_G0029217.1 mouse_genomes_project 5 124444460 124581654 - Cux2 protein_coding processed_transcript MGP_WSBEiJ_T0073988.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141140662 141159822 + MGP_WSBEiJ_P0073988 Tfr2 protein_coding protein_coding MGP_WSBEiJ_T0073989.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141140673 141159824 + MGP_WSBEiJ_P0073989 Tfr2 protein_coding protein_coding MGP_WSBEiJ_T0073990.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141140686 141142193 + Tfr2 protein_coding retained_intron MGP_WSBEiJ_T0073991.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141140691 141159822 + MGP_WSBEiJ_P0073991 Tfr2 protein_coding protein_coding MGP_WSBEiJ_T0073992.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141141554 141159808 + MGP_WSBEiJ_P0073992 Tfr2 protein_coding protein_coding MGP_WSBEiJ_T0073993.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141141635 141159819 + MGP_WSBEiJ_P0073993 Tfr2 protein_coding protein_coding MGP_WSBEiJ_T0073994.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141142281 141145219 + Tfr2 protein_coding retained_intron MGP_WSBEiJ_T0073995.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141145311 141149353 + Tfr2 protein_coding retained_intron MGP_WSBEiJ_T0073996.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141151275 141153215 + MGP_WSBEiJ_P0073996 Tfr2 protein_coding protein_coding MGP_WSBEiJ_T0073997.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141155597 141159332 + Tfr2 protein_coding retained_intron MGP_WSBEiJ_T0073998.1 MGP_WSBEiJ_G0029409.1 mouse_genomes_project 5 141155597 141156422 + Tfr2 protein_coding retained_intron MGP_WSBEiJ_T0001560.1 MGP_WSBEiJ_G0001484.1 mouse_genomes_project 5 54077445 54085590 + TEC TEC MGP_WSBEiJ_T0072141.1 MGP_WSBEiJ_G0029079.1 mouse_genomes_project 5 112908591 112909303 + Mn1 protein_coding processed_transcript MGP_WSBEiJ_T0072142.1 MGP_WSBEiJ_G0029079.1 mouse_genomes_project 5 112908671 112950677 + MGP_WSBEiJ_P0072142 Mn1 protein_coding protein_coding MGP_WSBEiJ_T0072168.1 MGP_WSBEiJ_G0029086.1 mouse_genomes_project 5 113905098 113943610 + MGP_WSBEiJ_P0072168 Hps4 protein_coding protein_coding MGP_WSBEiJ_T0072169.1 MGP_WSBEiJ_G0029086.1 mouse_genomes_project 5 113905108 113906758 + Hps4 protein_coding processed_transcript MGP_WSBEiJ_T0072170.1 MGP_WSBEiJ_G0029086.1 mouse_genomes_project 5 113905110 113943610 + Hps4 protein_coding retained_intron MGP_WSBEiJ_T0072171.1 MGP_WSBEiJ_G0029086.1 mouse_genomes_project 5 113905110 113943610 + MGP_WSBEiJ_P0072171 Hps4 protein_coding protein_coding MGP_WSBEiJ_T0072172.1 MGP_WSBEiJ_G0029086.1 mouse_genomes_project 5 113905115 113906898 + Hps4 protein_coding processed_transcript MGP_WSBEiJ_T0072174.1 MGP_WSBEiJ_G0029086.1 mouse_genomes_project 5 113933960 113934990 + Hps4 protein_coding retained_intron MGP_WSBEiJ_T0072175.1 MGP_WSBEiJ_G0029086.1 mouse_genomes_project 5 113940537 113943597 + Hps4 protein_coding retained_intron MGP_WSBEiJ_T0014466.1 MGP_WSBEiJ_G0012596.1 mouse_genomes_project 5 20834075 20834199 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008156.1 MGP_WSBEiJ_G0006643.1 mouse_genomes_project 5 113259406 113266172 + Gm16019 lincRNA lincRNA MGP_WSBEiJ_T0074656.1 MGP_WSBEiJ_G0029551.1 mouse_genomes_project 5 150701737 150790915 + MGP_WSBEiJ_P0074656 Wasf3 protein_coding protein_coding MGP_WSBEiJ_T0001496.1 MGP_WSBEiJ_G0001421.1 mouse_genomes_project 5 42714121 42718344 - TEC TEC MGP_WSBEiJ_T0071257.1 MGP_WSBEiJ_G0028881.1 mouse_genomes_project 5 87938785 87963335 + MGP_WSBEiJ_P0071257 Prr27 protein_coding protein_coding MGP_WSBEiJ_T0071258.1 MGP_WSBEiJ_G0028881.1 mouse_genomes_project 5 87938785 87963335 + MGP_WSBEiJ_P0071258 Prr27 protein_coding protein_coding MGP_WSBEiJ_T0001542.1 MGP_WSBEiJ_G0001466.1 mouse_genomes_project 5 48405716 48408283 + TEC TEC MGP_WSBEiJ_T0072136.1 MGP_WSBEiJ_G0029078.1 mouse_genomes_project 5 112820852 112875780 + MGP_WSBEiJ_P0072136 Pitpnb protein_coding protein_coding MGP_WSBEiJ_T0072137.1 MGP_WSBEiJ_G0029078.1 mouse_genomes_project 5 112820896 112875780 + MGP_WSBEiJ_P0072137 Pitpnb protein_coding protein_coding MGP_WSBEiJ_T0072138.1 MGP_WSBEiJ_G0029078.1 mouse_genomes_project 5 112820903 112875786 + MGP_WSBEiJ_P0072138 Pitpnb protein_coding unknown_likely_coding MGP_WSBEiJ_T0072139.1 MGP_WSBEiJ_G0029078.1 mouse_genomes_project 5 112837581 112870534 + Pitpnb protein_coding processed_transcript MGP_WSBEiJ_T0072140.1 MGP_WSBEiJ_G0029078.1 mouse_genomes_project 5 112866641 112871124 + Pitpnb protein_coding retained_intron MGP_WSBEiJ_T0014629.1 MGP_WSBEiJ_G0012759.1 mouse_genomes_project 5 92101179 92102059 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001645.1 MGP_WSBEiJ_G0001567.1 mouse_genomes_project 5 72643257 72644135 + TEC TEC MGP_WSBEiJ_T0072187.1 MGP_WSBEiJ_G0029090.1 mouse_genomes_project 5 114018470 114020801 + MGP_WSBEiJ_P0072187 Gm6588 protein_coding protein_coding MGP_WSBEiJ_T0001463.1 MGP_WSBEiJ_G0001388.1 mouse_genomes_project 5 30668104 30669142 - TEC TEC MGP_WSBEiJ_T0071550.1 MGP_WSBEiJ_G0028959.1 mouse_genomes_project 5 98477432 98626248 - MGP_WSBEiJ_P0071550 Antxr2 protein_coding protein_coding MGP_WSBEiJ_T0071551.1 MGP_WSBEiJ_G0028959.1 mouse_genomes_project 5 98512746 98626329 - MGP_WSBEiJ_P0071551 Antxr2 protein_coding protein_coding MGP_WSBEiJ_T0071552.1 MGP_WSBEiJ_G0028959.1 mouse_genomes_project 5 98554666 98597218 - Antxr2 protein_coding processed_transcript MGP_WSBEiJ_T0072650.1 MGP_WSBEiJ_G0029178.1 mouse_genomes_project 5 122032403 122040694 + MGP_WSBEiJ_P0072650 Tbx5 protein_coding protein_coding MGP_WSBEiJ_T0072651.1 MGP_WSBEiJ_G0029178.1 mouse_genomes_project 5 122034375 122089998 + MGP_WSBEiJ_P0072651 Tbx5 protein_coding protein_coding MGP_WSBEiJ_T0072652.1 MGP_WSBEiJ_G0029178.1 mouse_genomes_project 5 122035954 122044903 + MGP_WSBEiJ_P0072652 Tbx5 protein_coding protein_coding MGP_WSBEiJ_T0069227.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21934456 21941003 + MGP_WSBEiJ_P0069227 Abcb8 protein_coding protein_coding MGP_WSBEiJ_T0069228.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21934469 21950825 + MGP_WSBEiJ_P0069228 Abcb8 protein_coding protein_coding MGP_WSBEiJ_T0069229.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21934954 21950716 + MGP_WSBEiJ_P0069229 Abcb8 protein_coding protein_coding MGP_WSBEiJ_T0069230.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21935195 21944756 + Abcb8 protein_coding processed_transcript MGP_WSBEiJ_T0069231.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21935207 21941446 + Abcb8 protein_coding retained_intron MGP_WSBEiJ_T0069232.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21941378 21950718 + MGP_WSBEiJ_P0069232 Abcb8 protein_coding protein_coding MGP_WSBEiJ_T0069233.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21943034 21947490 + Abcb8 protein_coding retained_intron MGP_WSBEiJ_T0069234.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21946593 21950717 + Abcb8 protein_coding retained_intron MGP_WSBEiJ_T0069235.1 MGP_WSBEiJ_G0028529.1 mouse_genomes_project 5 21947186 21950695 + MGP_WSBEiJ_P0069235 Abcb8 protein_coding protein_coding MGP_WSBEiJ_T0071994.1 MGP_WSBEiJ_G0029053.1 mouse_genomes_project 5 110607369 110639610 + MGP_WSBEiJ_P0071994 Vmn2r16 protein_coding protein_coding MGP_WSBEiJ_T0017547.1 MGP_WSBEiJ_G0015017.1 mouse_genomes_project 5 48777434 48876381 - Gm36814 processed_transcript lincRNA MGP_WSBEiJ_T0017548.1 MGP_WSBEiJ_G0015017.1 mouse_genomes_project 5 48859409 48875421 - Gm36814 processed_transcript retained_intron MGP_WSBEiJ_T0004634.1 MGP_WSBEiJ_G0004009.1 mouse_genomes_project 5 71594250 71649631 + Gm20647 antisense antisense MGP_WSBEiJ_T0073740.1 MGP_WSBEiJ_G0029365.1 mouse_genomes_project 5 139147860 139157673 - MGP_WSBEiJ_P0073740 Tmem120a protein_coding protein_coding MGP_WSBEiJ_T0073741.1 MGP_WSBEiJ_G0029365.1 mouse_genomes_project 5 139147879 139148966 - Tmem120a protein_coding retained_intron MGP_WSBEiJ_T0073742.1 MGP_WSBEiJ_G0029365.1 mouse_genomes_project 5 139147913 139149612 - Tmem120a protein_coding processed_transcript MGP_WSBEiJ_T0073743.1 MGP_WSBEiJ_G0029365.1 mouse_genomes_project 5 139148630 139155624 - Tmem120a protein_coding retained_intron MGP_WSBEiJ_T0073744.1 MGP_WSBEiJ_G0029365.1 mouse_genomes_project 5 139149583 139157433 - MGP_WSBEiJ_P0073744 Tmem120a protein_coding protein_coding MGP_WSBEiJ_T0011416.1 MGP_WSBEiJ_G0009573.1 mouse_genomes_project 5 143637060 143637381 + Gm24146 misc_RNA misc_RNA MGP_WSBEiJ_T0073622.1 MGP_WSBEiJ_G0029340.1 mouse_genomes_project 5 138029419 138077488 - MGP_WSBEiJ_P0073622 Eln protein_coding protein_coding MGP_WSBEiJ_T0073623.1 MGP_WSBEiJ_G0029340.1 mouse_genomes_project 5 138029666 138055458 - Eln protein_coding retained_intron MGP_WSBEiJ_T0073624.1 MGP_WSBEiJ_G0029340.1 mouse_genomes_project 5 138029666 138077411 - MGP_WSBEiJ_P0073624 Eln protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073625.1 MGP_WSBEiJ_G0029340.1 mouse_genomes_project 5 138055760 138059255 - Eln protein_coding retained_intron MGP_WSBEiJ_T0073626.1 MGP_WSBEiJ_G0029340.1 mouse_genomes_project 5 138074896 138077418 - Eln protein_coding retained_intron MGP_WSBEiJ_T0071589.1 MGP_WSBEiJ_G0028969.1 mouse_genomes_project 5 100675641 100676244 + MGP_WSBEiJ_P0071589 4930524J08Rik protein_coding protein_coding MGP_WSBEiJ_T0071216.1 MGP_WSBEiJ_G0028875.1 mouse_genomes_project 5 87644956 87661345 - MGP_WSBEiJ_P0071216 Sult1d1 protein_coding protein_coding MGP_WSBEiJ_T0071217.1 MGP_WSBEiJ_G0028875.1 mouse_genomes_project 5 87647227 87651448 - Sult1d1 protein_coding processed_transcript MGP_WSBEiJ_T0014510.1 MGP_WSBEiJ_G0012640.1 mouse_genomes_project 5 33557622 33559409 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074077.1 MGP_WSBEiJ_G0029425.1 mouse_genomes_project 5 141450932 141456802 - MGP_WSBEiJ_P0074077 protein_coding protein_coding MGP_WSBEiJ_T0068800.1 MGP_WSBEiJ_G0028455.1 mouse_genomes_project 5 499751 524481 + MGP_WSBEiJ_P0068800 Tmbim7 protein_coding protein_coding MGP_WSBEiJ_T0068801.1 MGP_WSBEiJ_G0028455.1 mouse_genomes_project 5 504817 530807 + MGP_WSBEiJ_P0068801 Tmbim7 protein_coding protein_coding MGP_WSBEiJ_T0068802.1 MGP_WSBEiJ_G0028455.1 mouse_genomes_project 5 504992 514848 + Tmbim7 protein_coding retained_intron MGP_WSBEiJ_T0068803.1 MGP_WSBEiJ_G0028455.1 mouse_genomes_project 5 504993 530935 + MGP_WSBEiJ_P0068803 Tmbim7 protein_coding protein_coding MGP_WSBEiJ_T0068804.1 MGP_WSBEiJ_G0028455.1 mouse_genomes_project 5 509501 531714 + MGP_WSBEiJ_P0068804 Tmbim7 protein_coding protein_coding MGP_WSBEiJ_T0098328.1 MGP_WSBEiJ_G0036991.1 mouse_genomes_project 5 20015487 20015552 - Gm24512 snRNA snRNA MGP_WSBEiJ_T0008165.1 MGP_WSBEiJ_G0006649.1 mouse_genomes_project 5 113771100 113772545 + lincRNA lincRNA MGP_WSBEiJ_T0014586.1 MGP_WSBEiJ_G0012716.1 mouse_genomes_project 5 72057771 72058081 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0072255.1 MGP_WSBEiJ_G0029104.1 mouse_genomes_project 5 115475086 115483202 - MGP_WSBEiJ_P0072255 Tmem119 protein_coding protein_coding MGP_WSBEiJ_T0072256.1 MGP_WSBEiJ_G0029104.1 mouse_genomes_project 5 115476995 115483132 - MGP_WSBEiJ_P0072256 Tmem119 protein_coding protein_coding MGP_WSBEiJ_T0072387.1 MGP_WSBEiJ_G0029126.1 mouse_genomes_project 5 116595666 116609857 - MGP_WSBEiJ_P0072387 protein_coding protein_coding MGP_WSBEiJ_T0068764.1 MGP_WSBEiJ_G0028450.1 mouse_genomes_project 5 383682 410075 + MGP_WSBEiJ_P0068764 Fam133b protein_coding protein_coding MGP_WSBEiJ_T0068765.1 MGP_WSBEiJ_G0028450.1 mouse_genomes_project 5 383685 400891 + Fam133b protein_coding retained_intron MGP_WSBEiJ_T0068766.1 MGP_WSBEiJ_G0028450.1 mouse_genomes_project 5 383687 409577 + MGP_WSBEiJ_P0068766 Fam133b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0068767.1 MGP_WSBEiJ_G0028450.1 mouse_genomes_project 5 383687 409577 + MGP_WSBEiJ_P0068767 Fam133b protein_coding protein_coding MGP_WSBEiJ_T0068768.1 MGP_WSBEiJ_G0028450.1 mouse_genomes_project 5 383693 409650 + Fam133b protein_coding retained_intron MGP_WSBEiJ_T0068769.1 MGP_WSBEiJ_G0028450.1 mouse_genomes_project 5 399506 404563 + Fam133b protein_coding retained_intron MGP_WSBEiJ_T0068770.1 MGP_WSBEiJ_G0028450.1 mouse_genomes_project 5 404878 405570 + Fam133b protein_coding retained_intron MGP_WSBEiJ_T0068771.1 MGP_WSBEiJ_G0028450.1 mouse_genomes_project 5 406681 408868 + Fam133b protein_coding retained_intron MGP_WSBEiJ_T0010524.1 MGP_WSBEiJ_G0008681.1 mouse_genomes_project 5 91124573 91124643 - Gm24322 miRNA miRNA MGP_WSBEiJ_T0098334.1 MGP_WSBEiJ_G0036997.1 mouse_genomes_project 5 29994817 29994924 + Gm26335 snRNA snRNA MGP_WSBEiJ_T0014694.1 MGP_WSBEiJ_G0012824.1 mouse_genomes_project 5 119061530 119062113 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010548.1 MGP_WSBEiJ_G0008705.1 mouse_genomes_project 5 137879575 137879614 + Mir7228 miRNA miRNA MGP_WSBEiJ_T0099594.1 MGP_WSBEiJ_G0038257.1 mouse_genomes_project 5 61087092 61087224 - Gm22273 snoRNA snoRNA MGP_WSBEiJ_T0001606.1 MGP_WSBEiJ_G0001529.1 mouse_genomes_project 5 65223833 65227195 - TEC TEC MGP_WSBEiJ_T0070712.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65475307 65490340 - Apbb2 protein_coding retained_intron MGP_WSBEiJ_T0070713.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65475329 65809773 - MGP_WSBEiJ_P0070713 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070714.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65475332 65809799 - MGP_WSBEiJ_P0070714 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070715.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65475332 65809696 - MGP_WSBEiJ_P0070715 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070716.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65475444 65809678 - MGP_WSBEiJ_P0070716 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070717.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65477262 65679843 - Apbb2 protein_coding retained_intron MGP_WSBEiJ_T0070718.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65478473 65516956 - Apbb2 protein_coding processed_transcript MGP_WSBEiJ_T0070719.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65478488 65809686 - MGP_WSBEiJ_P0070719 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070720.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65478488 65809686 - MGP_WSBEiJ_P0070720 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070721.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65478805 65679842 - MGP_WSBEiJ_P0070721 Apbb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0070722.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65484187 65516757 - Apbb2 protein_coding processed_transcript MGP_WSBEiJ_T0070723.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65583820 65809698 - Apbb2 protein_coding retained_intron MGP_WSBEiJ_T0070724.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65583820 65809685 - Apbb2 protein_coding retained_intron MGP_WSBEiJ_T0070725.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65638815 65809655 - MGP_WSBEiJ_P0070725 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070726.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65638828 65704177 - MGP_WSBEiJ_P0070726 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070727.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65638857 65809686 - MGP_WSBEiJ_P0070727 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070728.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65639061 65809789 - MGP_WSBEiJ_P0070728 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070729.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65639094 65704184 - MGP_WSBEiJ_P0070729 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070730.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65639100 65737699 - MGP_WSBEiJ_P0070730 Apbb2 protein_coding protein_coding MGP_WSBEiJ_T0070731.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65648747 65809687 - Apbb2 protein_coding retained_intron MGP_WSBEiJ_T0070732.1 MGP_WSBEiJ_G0028777.1 mouse_genomes_project 5 65731469 65809703 - Apbb2 protein_coding retained_intron MGP_WSBEiJ_T0069289.1 MGP_WSBEiJ_G0028538.1 mouse_genomes_project 5 22100264 22115075 - MGP_WSBEiJ_P0069289 4931409K22Rik protein_coding protein_coding MGP_WSBEiJ_T0069290.1 MGP_WSBEiJ_G0028538.1 mouse_genomes_project 5 22100264 22115075 - MGP_WSBEiJ_P0069290 4931409K22Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0069291.1 MGP_WSBEiJ_G0028538.1 mouse_genomes_project 5 22100280 22112297 - 4931409K22Rik protein_coding retained_intron MGP_WSBEiJ_T0069292.1 MGP_WSBEiJ_G0028538.1 mouse_genomes_project 5 22112298 22115134 - MGP_WSBEiJ_P0069292 4931409K22Rik protein_coding protein_coding MGP_WSBEiJ_T0069293.1 MGP_WSBEiJ_G0028538.1 mouse_genomes_project 5 22112307 22116478 - 4931409K22Rik protein_coding processed_transcript MGP_WSBEiJ_T0074594.1 MGP_WSBEiJ_G0029535.1 mouse_genomes_project 5 149286992 149296461 + MGP_WSBEiJ_P0074594 Bud31 protein_coding protein_coding MGP_WSBEiJ_T0074595.1 MGP_WSBEiJ_G0029535.1 mouse_genomes_project 5 149287026 149288292 + Bud31 protein_coding retained_intron MGP_WSBEiJ_T0074596.1 MGP_WSBEiJ_G0029535.1 mouse_genomes_project 5 149287027 149296457 + MGP_WSBEiJ_P0074596 Bud31 protein_coding protein_coding MGP_WSBEiJ_T0074597.1 MGP_WSBEiJ_G0029535.1 mouse_genomes_project 5 149287038 149296457 + MGP_WSBEiJ_P0074597 Bud31 protein_coding protein_coding MGP_WSBEiJ_T0074598.1 MGP_WSBEiJ_G0029535.1 mouse_genomes_project 5 149287045 149296454 + MGP_WSBEiJ_P0074598 Bud31 protein_coding protein_coding MGP_WSBEiJ_T0074599.1 MGP_WSBEiJ_G0029535.1 mouse_genomes_project 5 149288777 149291580 + Bud31 protein_coding retained_intron MGP_WSBEiJ_T0074600.1 MGP_WSBEiJ_G0029535.1 mouse_genomes_project 5 149291436 149296367 + Bud31 protein_coding retained_intron MGP_WSBEiJ_T0008271.1 MGP_WSBEiJ_G0006714.1 mouse_genomes_project 5 134519869 134544835 - Gm42590 lincRNA lincRNA MGP_WSBEiJ_T0017543.1 MGP_WSBEiJ_G0015015.1 mouse_genomes_project 5 34637957 34668765 - Gm42936 processed_transcript processed_transcript MGP_WSBEiJ_T0014513.1 MGP_WSBEiJ_G0012643.1 mouse_genomes_project 5 35476224 35476704 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0073178.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 126963855 127040194 - MGP_WSBEiJ_P0073178 Mphosph9 protein_coding protein_coding MGP_WSBEiJ_T0073179.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 126965565 127040071 - MGP_WSBEiJ_P0073179 Mphosph9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073180.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 126966565 127040074 - MGP_WSBEiJ_P0073180 Mphosph9 protein_coding protein_coding MGP_WSBEiJ_T0073181.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 126967517 126973998 - Mphosph9 protein_coding processed_transcript MGP_WSBEiJ_T0073182.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 126971890 126978215 - Mphosph9 protein_coding processed_transcript MGP_WSBEiJ_T0073183.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 126973834 126975901 - Mphosph9 protein_coding processed_transcript MGP_WSBEiJ_T0073184.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 126974833 126976272 - Mphosph9 protein_coding retained_intron MGP_WSBEiJ_T0073185.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 127002699 127040092 - MGP_WSBEiJ_P0073185 Mphosph9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073186.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 127009891 127037349 - MGP_WSBEiJ_P0073186 Mphosph9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0073187.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 127027493 127040194 - Mphosph9 protein_coding processed_transcript MGP_WSBEiJ_T0073188.1 MGP_WSBEiJ_G0029268.1 mouse_genomes_project 5 127027493 127040074 - Mphosph9 protein_coding processed_transcript MGP_WSBEiJ_T0070217.1 MGP_WSBEiJ_G0028694.1 mouse_genomes_project 5 36122238 36215841 + MGP_WSBEiJ_P0070217 Stx18 protein_coding protein_coding MGP_WSBEiJ_T0070218.1 MGP_WSBEiJ_G0028694.1 mouse_genomes_project 5 36122276 36216300 + MGP_WSBEiJ_P0070218 Stx18 protein_coding protein_coding MGP_WSBEiJ_T0070219.1 MGP_WSBEiJ_G0028694.1 mouse_genomes_project 5 36122294 36216306 + MGP_WSBEiJ_P0070219 Stx18 protein_coding protein_coding MGP_WSBEiJ_T0070220.1 MGP_WSBEiJ_G0028694.1 mouse_genomes_project 5 36122325 36200115 + MGP_WSBEiJ_P0070220 Stx18 protein_coding protein_coding MGP_WSBEiJ_T0070221.1 MGP_WSBEiJ_G0028694.1 mouse_genomes_project 5 36158889 36211907 + MGP_WSBEiJ_P0070221 Stx18 protein_coding protein_coding MGP_WSBEiJ_T0070222.1 MGP_WSBEiJ_G0028694.1 mouse_genomes_project 5 36194983 36205119 + Stx18 protein_coding processed_transcript MGP_WSBEiJ_T0070223.1 MGP_WSBEiJ_G0028694.1 mouse_genomes_project 5 36204728 36211933 + Stx18 protein_coding retained_intron MGP_WSBEiJ_T0097426.1 MGP_WSBEiJ_G0036099.1 mouse_genomes_project 5 134237828 134242518 - Gm43166 sense_intronic sense_intronic MGP_WSBEiJ_T0097076.1 MGP_WSBEiJ_G0035757.1 mouse_genomes_project 5 153243302 153243420 - n-R5s179 rRNA rRNA MGP_WSBEiJ_T0008307.1 MGP_WSBEiJ_G0006744.1 mouse_genomes_project 5 151036735 151037610 + 4930573C15Rik lincRNA lincRNA MGP_WSBEiJ_T0072745.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123755888 123757295 - Trafd1 protein_coding retained_intron MGP_WSBEiJ_T0072746.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123755888 123762965 - MGP_WSBEiJ_P0072746 Trafd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0072747.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123755888 123770602 - MGP_WSBEiJ_P0072747 Trafd1 protein_coding protein_coding MGP_WSBEiJ_T0072748.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123755893 123770541 - MGP_WSBEiJ_P0072748 Trafd1 protein_coding protein_coding MGP_WSBEiJ_T0072749.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123755895 123757638 - MGP_WSBEiJ_P0072749 Trafd1 protein_coding protein_coding MGP_WSBEiJ_T0072750.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123762772 123769552 - MGP_WSBEiJ_P0072750 Trafd1 protein_coding protein_coding MGP_WSBEiJ_T0072751.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123763018 123770547 - MGP_WSBEiJ_P0072751 Trafd1 protein_coding protein_coding MGP_WSBEiJ_T0072752.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123763738 123770599 - MGP_WSBEiJ_P0072752 Trafd1 protein_coding protein_coding MGP_WSBEiJ_T0072753.1 MGP_WSBEiJ_G0029202.1 mouse_genomes_project 5 123768305 123769503 - Trafd1 protein_coding processed_transcript MGP_WSBEiJ_T0008153.1 MGP_WSBEiJ_G0006642.1 mouse_genomes_project 5 113246822 113280788 - E130006D01Rik lincRNA lincRNA MGP_WSBEiJ_T0008154.1 MGP_WSBEiJ_G0006642.1 mouse_genomes_project 5 113246841 113280810 - E130006D01Rik lincRNA lincRNA MGP_WSBEiJ_T0008155.1 MGP_WSBEiJ_G0006642.1 mouse_genomes_project 5 113246948 113280785 - E130006D01Rik lincRNA lincRNA MGP_WSBEiJ_T0098324.1 MGP_WSBEiJ_G0036987.1 mouse_genomes_project 5 16787205 16787308 - Gm25335 snRNA snRNA MGP_WSBEiJ_T0008157.1 MGP_WSBEiJ_G0006644.1 mouse_genomes_project 5 113312538 113330483 + Gm42487 lincRNA lincRNA MGP_WSBEiJ_T0008158.1 MGP_WSBEiJ_G0006644.1 mouse_genomes_project 5 113314376 113330400 + Gm42487 lincRNA lincRNA MGP_WSBEiJ_T0071639.1 MGP_WSBEiJ_G0028977.1 mouse_genomes_project 5 101405822 101428750 - MGP_WSBEiJ_P0071639 Coq2 protein_coding protein_coding MGP_WSBEiJ_T0071640.1 MGP_WSBEiJ_G0028977.1 mouse_genomes_project 5 101407462 101428622 - MGP_WSBEiJ_P0071640 Coq2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071641.1 MGP_WSBEiJ_G0028977.1 mouse_genomes_project 5 101410960 101428715 - MGP_WSBEiJ_P0071641 Coq2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071642.1 MGP_WSBEiJ_G0028977.1 mouse_genomes_project 5 101413179 101417369 - MGP_WSBEiJ_P0071642 Coq2 protein_coding protein_coding MGP_WSBEiJ_T0071643.1 MGP_WSBEiJ_G0028977.1 mouse_genomes_project 5 101414856 101429606 - MGP_WSBEiJ_P0071643 Coq2 protein_coding protein_coding MGP_WSBEiJ_T0073320.1 MGP_WSBEiJ_G0029291.1 mouse_genomes_project 5 128308147 128405800 + MGP_WSBEiJ_P0073320 Tmem132b protein_coding protein_coding MGP_WSBEiJ_T0073321.1 MGP_WSBEiJ_G0029291.1 mouse_genomes_project 5 128308747 128570983 + MGP_WSBEiJ_P0073321 Tmem132b protein_coding protein_coding MGP_WSBEiJ_T0073322.1 MGP_WSBEiJ_G0029291.1 mouse_genomes_project 5 128405507 128482770 + Tmem132b protein_coding retained_intron MGP_WSBEiJ_T0069351.1 MGP_WSBEiJ_G0028552.1 mouse_genomes_project 5 23306656 23326033 - MGP_WSBEiJ_P0069351 Xrcc2 protein_coding protein_coding MGP_WSBEiJ_T0069352.1 MGP_WSBEiJ_G0028552.1 mouse_genomes_project 5 23308897 23310285 - Xrcc2 protein_coding processed_transcript MGP_WSBEiJ_T0069353.1 MGP_WSBEiJ_G0028552.1 mouse_genomes_project 5 23314378 23325981 - MGP_WSBEiJ_P0069353 Xrcc2 protein_coding protein_coding MGP_WSBEiJ_T0069354.1 MGP_WSBEiJ_G0028552.1 mouse_genomes_project 5 23315136 23325972 - Xrcc2 protein_coding retained_intron MGP_WSBEiJ_T0097072.1 MGP_WSBEiJ_G0035753.1 mouse_genomes_project 5 121457836 121457953 + n-R5s175 rRNA rRNA MGP_WSBEiJ_T0070437.1 MGP_WSBEiJ_G0028729.1 mouse_genomes_project 5 46721138 47082574 - Kcnip4 protein_coding processed_transcript MGP_WSBEiJ_T0070438.1 MGP_WSBEiJ_G0028729.1 mouse_genomes_project 5 46721138 46930997 - MGP_WSBEiJ_P0070438 Kcnip4 protein_coding protein_coding MGP_WSBEiJ_T0070439.1 MGP_WSBEiJ_G0028729.1 mouse_genomes_project 5 46721138 47886729 - MGP_WSBEiJ_P0070439 Kcnip4 protein_coding protein_coding MGP_WSBEiJ_T0070440.1 MGP_WSBEiJ_G0028729.1 mouse_genomes_project 5 46721138 47229807 - MGP_WSBEiJ_P0070440 Kcnip4 protein_coding protein_coding MGP_WSBEiJ_T0070441.1 MGP_WSBEiJ_G0028729.1 mouse_genomes_project 5 46721139 46828020 - Kcnip4 protein_coding processed_transcript MGP_WSBEiJ_T0070442.1 MGP_WSBEiJ_G0028729.1 mouse_genomes_project 5 46721143 47886586 - MGP_WSBEiJ_P0070442 Kcnip4 protein_coding protein_coding MGP_WSBEiJ_T0070443.1 MGP_WSBEiJ_G0028729.1 mouse_genomes_project 5 46721148 47635759 - MGP_WSBEiJ_P0070443 Kcnip4 protein_coding protein_coding MGP_WSBEiJ_T0070446.1 MGP_WSBEiJ_G0028729.1 mouse_genomes_project 5 46727670 47082574 - Kcnip4 protein_coding processed_transcript MGP_WSBEiJ_T0072389.1 MGP_WSBEiJ_G0029128.1 mouse_genomes_project 5 116662877 116693742 + MGP_WSBEiJ_P0072389 4930519G04Rik protein_coding protein_coding MGP_WSBEiJ_T0072391.1 MGP_WSBEiJ_G0029128.1 mouse_genomes_project 5 116670304 116687280 + 4930519G04Rik protein_coding retained_intron MGP_WSBEiJ_T0072392.1 MGP_WSBEiJ_G0029128.1 mouse_genomes_project 5 116674087 116690383 + MGP_WSBEiJ_P0072392 4930519G04Rik protein_coding protein_coding MGP_WSBEiJ_T0072393.1 MGP_WSBEiJ_G0029128.1 mouse_genomes_project 5 116676060 116690383 + MGP_WSBEiJ_P0072393 4930519G04Rik protein_coding protein_coding MGP_WSBEiJ_T0014762.1 MGP_WSBEiJ_G0012892.1 mouse_genomes_project 5 151835692 151835914 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0071364.1 MGP_WSBEiJ_G0028917.1 mouse_genomes_project 5 91113029 91117592 + Cxcl3 protein_coding retained_intron MGP_WSBEiJ_T0071365.1 MGP_WSBEiJ_G0028917.1 mouse_genomes_project 5 91113029 91116083 + MGP_WSBEiJ_P0071365 Cxcl3 protein_coding protein_coding MGP_WSBEiJ_T0001511.1 MGP_WSBEiJ_G0001436.1 mouse_genomes_project 5 44770897 44772098 + TEC TEC MGP_WSBEiJ_T0001799.1 MGP_WSBEiJ_G0001720.1 mouse_genomes_project 5 132972993 132976378 + TEC TEC MGP_WSBEiJ_T0071971.1 MGP_WSBEiJ_G0029047.1 mouse_genomes_project 5 109836118 109863300 + MGP_WSBEiJ_P0071971 Idua protein_coding protein_coding MGP_WSBEiJ_T0071972.1 MGP_WSBEiJ_G0029047.1 mouse_genomes_project 5 109845004 109863305 + MGP_WSBEiJ_P0071972 Idua protein_coding protein_coding MGP_WSBEiJ_T0071973.1 MGP_WSBEiJ_G0029047.1 mouse_genomes_project 5 109845004 109863300 + MGP_WSBEiJ_P0071973 Idua protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071974.1 MGP_WSBEiJ_G0029047.1 mouse_genomes_project 5 109845193 109859021 + Idua protein_coding retained_intron MGP_WSBEiJ_T0071975.1 MGP_WSBEiJ_G0029047.1 mouse_genomes_project 5 109845209 109863300 + MGP_WSBEiJ_P0071975 Idua protein_coding protein_coding MGP_WSBEiJ_T0071976.1 MGP_WSBEiJ_G0029047.1 mouse_genomes_project 5 109845245 109863146 + MGP_WSBEiJ_P0071976 Idua protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0071977.1 MGP_WSBEiJ_G0029047.1 mouse_genomes_project 5 109845357 109857518 + Idua protein_coding processed_transcript MGP_WSBEiJ_T0071982.1 MGP_WSBEiJ_G0029047.1 mouse_genomes_project 5 109860476 109862052 + Idua protein_coding retained_intron MGP_WSBEiJ_T0073731.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139076101 139144042 + MGP_WSBEiJ_P0073731 Por protein_coding protein_coding MGP_WSBEiJ_T0073732.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139080649 139095154 + Por protein_coding processed_transcript MGP_WSBEiJ_T0073733.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139080653 139143498 + MGP_WSBEiJ_P0073733 Por protein_coding protein_coding MGP_WSBEiJ_T0073734.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139099181 139147702 + MGP_WSBEiJ_P0073734 Por protein_coding protein_coding MGP_WSBEiJ_T0073735.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139099303 139147702 + MGP_WSBEiJ_P0073735 Por protein_coding protein_coding MGP_WSBEiJ_T0073736.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139127267 139144259 + Por protein_coding retained_intron MGP_WSBEiJ_T0073737.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139138105 139142622 + MGP_WSBEiJ_P0073737 Por protein_coding protein_coding MGP_WSBEiJ_T0073738.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139143930 139146296 + Por protein_coding retained_intron MGP_WSBEiJ_T0073739.1 MGP_WSBEiJ_G0029364.1 mouse_genomes_project 5 139145561 139146428 + Por protein_coding retained_intron MGP_WSBEiJ_T0070175.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35078162 35143219 + MGP_WSBEiJ_P0070175 Jakmip1 protein_coding protein_coding MGP_WSBEiJ_T0070176.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35078965 35136880 + Jakmip1 protein_coding processed_transcript MGP_WSBEiJ_T0070177.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35079720 35143315 + MGP_WSBEiJ_P0070177 Jakmip1 protein_coding protein_coding MGP_WSBEiJ_T0070178.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35079740 35143014 + MGP_WSBEiJ_P0070178 Jakmip1 protein_coding protein_coding MGP_WSBEiJ_T0070179.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35096848 35136900 + Jakmip1 protein_coding processed_transcript MGP_WSBEiJ_T0070180.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35097260 35138749 + Jakmip1 protein_coding retained_intron MGP_WSBEiJ_T0070181.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35097301 35160079 + MGP_WSBEiJ_P0070181 Jakmip1 protein_coding protein_coding MGP_WSBEiJ_T0070182.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35100706 35181984 + MGP_WSBEiJ_P0070182 Jakmip1 protein_coding protein_coding MGP_WSBEiJ_T0070183.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35100765 35139033 + Jakmip1 protein_coding retained_intron MGP_WSBEiJ_T0070184.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35136939 35204432 + MGP_WSBEiJ_P0070184 Jakmip1 protein_coding protein_coding MGP_WSBEiJ_T0070185.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35136939 35204432 + MGP_WSBEiJ_P0070185 Jakmip1 protein_coding protein_coding MGP_WSBEiJ_T0070186.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35142851 35143801 + Jakmip1 protein_coding retained_intron MGP_WSBEiJ_T0070187.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35179652 35181704 + Jakmip1 protein_coding retained_intron MGP_WSBEiJ_T0070188.1 MGP_WSBEiJ_G0028687.1 mouse_genomes_project 5 35182910 35207722 + MGP_WSBEiJ_P0070188 Jakmip1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0001551.1 MGP_WSBEiJ_G0001475.1 mouse_genomes_project 5 50282996 50286799 - TEC TEC MGP_WSBEiJ_T0014553.1 MGP_WSBEiJ_G0012683.1 mouse_genomes_project 5 58601952 58602364 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097218.1 MGP_WSBEiJ_G0035899.1 mouse_genomes_project 5 92429287 92429416 - Gm22728 scaRNA scaRNA MGP_WSBEiJ_T0007995.1 MGP_WSBEiJ_G0006523.1 mouse_genomes_project 5 43207483 43219329 + 4930431F12Rik lincRNA lincRNA MGP_WSBEiJ_T0072103.1 MGP_WSBEiJ_G0029073.1 mouse_genomes_project 5 112237329 112244263 - MGP_WSBEiJ_P0072103 Pus1 protein_coding protein_coding MGP_WSBEiJ_T0072104.1 MGP_WSBEiJ_G0029073.1 mouse_genomes_project 5 112237329 112243634 - MGP_WSBEiJ_P0072104 Pus1 protein_coding protein_coding MGP_WSBEiJ_T0072105.1 MGP_WSBEiJ_G0029073.1 mouse_genomes_project 5 112237329 112244263 - MGP_WSBEiJ_P0072105 Pus1 protein_coding protein_coding MGP_WSBEiJ_T0072106.1 MGP_WSBEiJ_G0029073.1 mouse_genomes_project 5 112237329 112244326 - MGP_WSBEiJ_P0072106 Pus1 protein_coding protein_coding MGP_WSBEiJ_T0072107.1 MGP_WSBEiJ_G0029073.1 mouse_genomes_project 5 112237330 112244282 - MGP_WSBEiJ_P0072107 Pus1 protein_coding protein_coding MGP_WSBEiJ_T0072108.1 MGP_WSBEiJ_G0029073.1 mouse_genomes_project 5 112239198 112243813 - MGP_WSBEiJ_P0072108 Pus1 protein_coding protein_coding MGP_WSBEiJ_T0072109.1 MGP_WSBEiJ_G0029073.1 mouse_genomes_project 5 112239207 112244258 - MGP_WSBEiJ_P0072109 Pus1 protein_coding protein_coding MGP_WSBEiJ_T0001788.1 MGP_WSBEiJ_G0001709.1 mouse_genomes_project 5 129254243 129255220 + TEC TEC MGP_WSBEiJ_T0069008.1 MGP_WSBEiJ_G0028486.1 mouse_genomes_project 5 6467768 6717374 - MGP_WSBEiJ_P0069008 Grm3 protein_coding protein_coding MGP_WSBEiJ_T0099680.1 MGP_WSBEiJ_G0038343.1 mouse_genomes_project 6 125461748 125461879 - Gm22722 snoRNA snoRNA MGP_WSBEiJ_T0100950.1 MGP_WSBEiJ_G0039407.1 mouse_genomes_project 6 136251424 136252826 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079285.1 MGP_WSBEiJ_G0030570.1 mouse_genomes_project 6 137892485 137962152 + MGP_WSBEiJ_P0079285 Borcs5 protein_coding protein_coding MGP_WSBEiJ_T0079286.1 MGP_WSBEiJ_G0030570.1 mouse_genomes_project 6 137893950 137962969 + MGP_WSBEiJ_P0079286 Borcs5 protein_coding protein_coding MGP_WSBEiJ_T0079287.1 MGP_WSBEiJ_G0030570.1 mouse_genomes_project 6 137893971 137897716 + Borcs5 protein_coding retained_intron MGP_WSBEiJ_T0079288.1 MGP_WSBEiJ_G0030570.1 mouse_genomes_project 6 137894265 137940549 + Borcs5 protein_coding retained_intron MGP_WSBEiJ_T0079289.1 MGP_WSBEiJ_G0030570.1 mouse_genomes_project 6 137952461 137962252 + Borcs5 protein_coding processed_transcript MGP_WSBEiJ_T0001977.1 MGP_WSBEiJ_G0001897.1 mouse_genomes_project 6 75658315 75659681 - TEC TEC MGP_WSBEiJ_T0075846.1 MGP_WSBEiJ_G0029775.1 mouse_genomes_project 6 37390925 37401732 + MGP_WSBEiJ_P0075846 Ndufb2 protein_coding protein_coding MGP_WSBEiJ_T0075847.1 MGP_WSBEiJ_G0029775.1 mouse_genomes_project 6 37390934 37397821 + MGP_WSBEiJ_P0075847 Ndufb2 protein_coding protein_coding MGP_WSBEiJ_T0075848.1 MGP_WSBEiJ_G0029775.1 mouse_genomes_project 6 37390936 37397772 + Ndufb2 protein_coding processed_transcript MGP_WSBEiJ_T0075849.1 MGP_WSBEiJ_G0029775.1 mouse_genomes_project 6 37390939 37395097 + Ndufb2 protein_coding retained_intron MGP_WSBEiJ_T0075850.1 MGP_WSBEiJ_G0029775.1 mouse_genomes_project 6 37395613 37397642 + Ndufb2 protein_coding retained_intron MGP_WSBEiJ_T0075851.1 MGP_WSBEiJ_G0029775.1 mouse_genomes_project 6 37400133 37401660 + Ndufb2 protein_coding processed_transcript MGP_WSBEiJ_T0100907.1 MGP_WSBEiJ_G0039365.1 mouse_genomes_project 6 57015132 57016026 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002666.1 MGP_WSBEiJ_G0002550.1 mouse_genomes_project 6 38929018 38929294 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0100940.1 MGP_WSBEiJ_G0039397.1 mouse_genomes_project 6 134020352 134027511 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014806.1 MGP_WSBEiJ_G0012936.1 mouse_genomes_project 6 11242138 11242709 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098458.1 MGP_WSBEiJ_G0037121.1 mouse_genomes_project 6 152934056 152934163 - Gm22578 snRNA snRNA MGP_WSBEiJ_T0076911.1 MGP_WSBEiJ_G0030064.1 mouse_genomes_project 6 78611905 78615016 + MGP_WSBEiJ_P0076911 Reg3a protein_coding protein_coding MGP_WSBEiJ_T0078733.1 MGP_WSBEiJ_G0030425.1 mouse_genomes_project 6 126695077 126728821 - MGP_WSBEiJ_P0078733 protein_coding protein_coding MGP_WSBEiJ_T0078336.1 MGP_WSBEiJ_G0030344.1 mouse_genomes_project 6 118139356 118181939 - MGP_WSBEiJ_P0078336 Rassf4 protein_coding protein_coding MGP_WSBEiJ_T0078337.1 MGP_WSBEiJ_G0030344.1 mouse_genomes_project 6 118144586 118154289 - MGP_WSBEiJ_P0078337 Rassf4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078338.1 MGP_WSBEiJ_G0030344.1 mouse_genomes_project 6 118145572 118181796 - MGP_WSBEiJ_P0078338 Rassf4 protein_coding protein_coding MGP_WSBEiJ_T0078339.1 MGP_WSBEiJ_G0030344.1 mouse_genomes_project 6 118145836 118147355 - Rassf4 protein_coding processed_transcript MGP_WSBEiJ_T0078340.1 MGP_WSBEiJ_G0030344.1 mouse_genomes_project 6 118149225 118181776 - Rassf4 protein_coding retained_intron MGP_WSBEiJ_T0078341.1 MGP_WSBEiJ_G0030344.1 mouse_genomes_project 6 118151545 118154240 - Rassf4 protein_coding retained_intron MGP_WSBEiJ_T0078342.1 MGP_WSBEiJ_G0030344.1 mouse_genomes_project 6 118152210 118181758 - MGP_WSBEiJ_P0078342 Rassf4 protein_coding protein_coding MGP_WSBEiJ_T0078343.1 MGP_WSBEiJ_G0030344.1 mouse_genomes_project 6 118152281 118181785 - MGP_WSBEiJ_P0078343 Rassf4 protein_coding protein_coding MGP_WSBEiJ_T0001980.1 MGP_WSBEiJ_G0001900.1 mouse_genomes_project 6 77604928 77609048 - TEC TEC MGP_WSBEiJ_T0002025.1 MGP_WSBEiJ_G0001945.1 mouse_genomes_project 6 88753910 88756993 - TEC TEC MGP_WSBEiJ_T0008449.1 MGP_WSBEiJ_G0006837.1 mouse_genomes_project 6 47014525 47015760 - Gm44226 lincRNA lincRNA MGP_WSBEiJ_T0008571.1 MGP_WSBEiJ_G0006934.1 mouse_genomes_project 6 119010475 119015304 + Gm43983 lincRNA lincRNA MGP_WSBEiJ_T0000171.1 MGP_WSBEiJ_G0000129.1 mouse_genomes_project 6 68380859 68381327 - MGP_WSBEiJ_P0000171 Igkv19-93 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000172.1 MGP_WSBEiJ_G0000129.1 mouse_genomes_project 6 68380859 68381343 - MGP_WSBEiJ_P0000172 Igkv19-93 IG_V_gene IG_V_gene MGP_WSBEiJ_T0001907.1 MGP_WSBEiJ_G0001827.1 mouse_genomes_project 6 30938826 30940438 + TEC TEC MGP_WSBEiJ_T0100928.1 MGP_WSBEiJ_G0039386.1 mouse_genomes_project 6 91049770 91050718 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0075141.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14268724 14307677 + MGP_WSBEiJ_P0075141 Cav1 protein_coding protein_coding MGP_WSBEiJ_T0075142.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14268734 14306782 + MGP_WSBEiJ_P0075142 Cav1 protein_coding protein_coding MGP_WSBEiJ_T0075143.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14268799 14305650 + MGP_WSBEiJ_P0075143 Cav1 protein_coding protein_coding MGP_WSBEiJ_T0075144.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14268800 14293932 + Cav1 protein_coding processed_transcript MGP_WSBEiJ_T0075145.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14268800 14305705 + MGP_WSBEiJ_P0075145 Cav1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075146.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14268812 14270817 + MGP_WSBEiJ_P0075146 Cav1 protein_coding protein_coding MGP_WSBEiJ_T0075147.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14269661 14305507 + MGP_WSBEiJ_P0075147 Cav1 protein_coding protein_coding MGP_WSBEiJ_T0075148.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14269891 14305873 + MGP_WSBEiJ_P0075148 Cav1 protein_coding protein_coding MGP_WSBEiJ_T0075149.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14270253 14307805 + MGP_WSBEiJ_P0075149 Cav1 protein_coding protein_coding MGP_WSBEiJ_T0075150.1 MGP_WSBEiJ_G0029643.1 mouse_genomes_project 6 14270336 14293923 + Cav1 protein_coding processed_transcript MGP_WSBEiJ_T0001999.1 MGP_WSBEiJ_G0001919.1 mouse_genomes_project 6 83447474 83449002 - TEC TEC MGP_WSBEiJ_T0076100.1 MGP_WSBEiJ_G0029866.1 mouse_genomes_project 6 46285746 46309824 - MGP_WSBEiJ_P0076100 Zfp746 protein_coding protein_coding MGP_WSBEiJ_T0076101.1 MGP_WSBEiJ_G0029866.1 mouse_genomes_project 6 46285746 46309824 - MGP_WSBEiJ_P0076101 Zfp746 protein_coding protein_coding MGP_WSBEiJ_T0076102.1 MGP_WSBEiJ_G0029866.1 mouse_genomes_project 6 46288103 46290713 - MGP_WSBEiJ_P0076102 Zfp746 protein_coding protein_coding MGP_WSBEiJ_T0076103.1 MGP_WSBEiJ_G0029866.1 mouse_genomes_project 6 46289563 46305514 - Zfp746 protein_coding retained_intron MGP_WSBEiJ_T0076104.1 MGP_WSBEiJ_G0029866.1 mouse_genomes_project 6 46304857 46308442 - Zfp746 protein_coding retained_intron MGP_WSBEiJ_T0076105.1 MGP_WSBEiJ_G0029866.1 mouse_genomes_project 6 46308467 46309777 - Zfp746 protein_coding retained_intron MGP_WSBEiJ_T0078481.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121546515 121549808 - Wnk1 protein_coding retained_intron MGP_WSBEiJ_T0078482.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121546515 121668578 - MGP_WSBEiJ_P0078482 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078483.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121546517 121668561 - MGP_WSBEiJ_P0078483 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078484.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121546517 121668561 - MGP_WSBEiJ_P0078484 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078485.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121547167 121667565 - MGP_WSBEiJ_P0078485 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078486.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121547167 121667565 - MGP_WSBEiJ_P0078486 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078487.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121549125 121558990 - MGP_WSBEiJ_P0078487 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078488.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121549671 121560190 - MGP_WSBEiJ_P0078488 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078489.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121552379 121556872 - MGP_WSBEiJ_P0078489 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078490.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121552379 121556873 - MGP_WSBEiJ_P0078490 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078491.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121553314 121556380 - Wnk1 protein_coding retained_intron MGP_WSBEiJ_T0078492.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121560000 121570769 - MGP_WSBEiJ_P0078492 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078493.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121560155 121570448 - MGP_WSBEiJ_P0078493 Wnk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078494.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121560275 121562632 - Wnk1 protein_coding retained_intron MGP_WSBEiJ_T0078495.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121566670 121572497 - Wnk1 protein_coding retained_intron MGP_WSBEiJ_T0078496.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121572665 121574343 - Wnk1 protein_coding retained_intron MGP_WSBEiJ_T0078497.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121573995 121592756 - MGP_WSBEiJ_P0078497 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078498.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121574002 121579544 - MGP_WSBEiJ_P0078498 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078499.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121575214 121614295 - MGP_WSBEiJ_P0078499 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078500.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121575995 121668513 - Wnk1 protein_coding retained_intron MGP_WSBEiJ_T0078501.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121575995 121614254 - Wnk1 protein_coding retained_intron MGP_WSBEiJ_T0078502.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121579469 121586971 - MGP_WSBEiJ_P0078502 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078503.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121586348 121587774 - MGP_WSBEiJ_P0078503 Wnk1 protein_coding protein_coding MGP_WSBEiJ_T0078504.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121593646 121616658 - Wnk1 protein_coding processed_transcript MGP_WSBEiJ_T0078505.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121593657 121605553 - Wnk1 protein_coding processed_transcript MGP_WSBEiJ_T0078506.1 MGP_WSBEiJ_G0030368.1 mouse_genomes_project 6 121594839 121597169 - Wnk1 protein_coding retained_intron MGP_WSBEiJ_T0097088.1 MGP_WSBEiJ_G0035769.1 mouse_genomes_project 6 143752390 143752501 - Gm24174 rRNA rRNA MGP_WSBEiJ_T0079497.1 MGP_WSBEiJ_G0030612.1 mouse_genomes_project 6 143610073 143610980 + Capza3 protein_coding processed_transcript MGP_WSBEiJ_T0079498.1 MGP_WSBEiJ_G0030612.1 mouse_genomes_project 6 143610378 143611600 + MGP_WSBEiJ_P0079498 Capza3 protein_coding protein_coding MGP_WSBEiJ_T0077589.1 MGP_WSBEiJ_G0030200.1 mouse_genomes_project 6 90881942 90890282 + MGP_WSBEiJ_P0077589 Vmn1r51 protein_coding protein_coding MGP_WSBEiJ_T0077590.1 MGP_WSBEiJ_G0030200.1 mouse_genomes_project 6 90887715 90890282 + MGP_WSBEiJ_P0077590 Vmn1r51 protein_coding protein_coding MGP_WSBEiJ_T0074978.1 MGP_WSBEiJ_G0029608.1 mouse_genomes_project 6 2029726 2067855 - MGP_WSBEiJ_P0074978 Pon2 protein_coding protein_coding MGP_WSBEiJ_T0074979.1 MGP_WSBEiJ_G0029608.1 mouse_genomes_project 6 2035725 2067730 - Pon2 protein_coding retained_intron MGP_WSBEiJ_T0074980.1 MGP_WSBEiJ_G0029608.1 mouse_genomes_project 6 2038709 2057506 - Pon2 protein_coding processed_transcript MGP_WSBEiJ_T0074981.1 MGP_WSBEiJ_G0029608.1 mouse_genomes_project 6 2045570 2048408 - Pon2 protein_coding retained_intron MGP_WSBEiJ_T0002043.1 MGP_WSBEiJ_G0001963.1 mouse_genomes_project 6 92574830 92576773 - TEC TEC MGP_WSBEiJ_T0078722.1 MGP_WSBEiJ_G0030420.1 mouse_genomes_project 6 126461283 126463485 - Clstn3 protein_coding processed_transcript MGP_WSBEiJ_T0078723.1 MGP_WSBEiJ_G0030420.1 mouse_genomes_project 6 126461571 126500377 - MGP_WSBEiJ_P0078723 Clstn3 protein_coding protein_coding MGP_WSBEiJ_T0078724.1 MGP_WSBEiJ_G0030420.1 mouse_genomes_project 6 126466741 126468847 - Clstn3 protein_coding retained_intron MGP_WSBEiJ_T0078725.1 MGP_WSBEiJ_G0030420.1 mouse_genomes_project 6 126468871 126482285 - Clstn3 protein_coding retained_intron MGP_WSBEiJ_T0078726.1 MGP_WSBEiJ_G0030420.1 mouse_genomes_project 6 126489772 126491671 - Clstn3 protein_coding processed_transcript MGP_WSBEiJ_T0078727.1 MGP_WSBEiJ_G0030420.1 mouse_genomes_project 6 126497502 126499994 - MGP_WSBEiJ_P0078727 Clstn3 protein_coding protein_coding MGP_WSBEiJ_T0100902.1 MGP_WSBEiJ_G0039360.1 mouse_genomes_project 6 56656916 56657418 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0075914.1 MGP_WSBEiJ_G0029800.1 mouse_genomes_project 6 39230749 39240845 + MGP_WSBEiJ_P0075914 Try10 protein_coding protein_coding MGP_WSBEiJ_T0002053.1 MGP_WSBEiJ_G0001973.1 mouse_genomes_project 6 98653260 98654933 - TEC TEC MGP_WSBEiJ_T0100923.1 MGP_WSBEiJ_G0039381.1 mouse_genomes_project 6 90555390 90556377 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0017693.1 MGP_WSBEiJ_G0015061.1 mouse_genomes_project 6 72607280 72613218 + Gm20536 processed_transcript processed_transcript MGP_WSBEiJ_T0079254.1 MGP_WSBEiJ_G0030556.1 mouse_genomes_project 6 136022910 136023912 + MGP_WSBEiJ_P0079254 Tas2r110 protein_coding protein_coding MGP_WSBEiJ_T0008531.1 MGP_WSBEiJ_G0006901.1 mouse_genomes_project 6 90011511 90012829 - Gm44204 lincRNA lincRNA MGP_WSBEiJ_T0008632.1 MGP_WSBEiJ_G0006978.1 mouse_genomes_project 6 149017266 149018595 + Gm15706 lincRNA lincRNA MGP_WSBEiJ_T0008491.1 MGP_WSBEiJ_G0006870.1 mouse_genomes_project 6 71218165 71218815 - Gm44110 lincRNA lincRNA MGP_WSBEiJ_T0002144.1 MGP_WSBEiJ_G0002063.1 mouse_genomes_project 6 152701793 152703454 + TEC TEC MGP_WSBEiJ_T0077533.1 MGP_WSBEiJ_G0030185.1 mouse_genomes_project 6 89625767 89641048 - MGP_WSBEiJ_P0077533 Mcm2 protein_coding protein_coding MGP_WSBEiJ_T0077534.1 MGP_WSBEiJ_G0030185.1 mouse_genomes_project 6 89630716 89634212 - Mcm2 protein_coding retained_intron MGP_WSBEiJ_T0077535.1 MGP_WSBEiJ_G0030185.1 mouse_genomes_project 6 89632176 89635482 - MGP_WSBEiJ_P0077535 Mcm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077536.1 MGP_WSBEiJ_G0030185.1 mouse_genomes_project 6 89635338 89640969 - Mcm2 protein_coding processed_transcript MGP_WSBEiJ_T0077537.1 MGP_WSBEiJ_G0030185.1 mouse_genomes_project 6 89635449 89640956 - MGP_WSBEiJ_P0077537 Mcm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077538.1 MGP_WSBEiJ_G0030185.1 mouse_genomes_project 6 89635465 89636024 - Mcm2 protein_coding retained_intron MGP_WSBEiJ_T0077539.1 MGP_WSBEiJ_G0030185.1 mouse_genomes_project 6 89639181 89640945 - Mcm2 protein_coding retained_intron MGP_WSBEiJ_T0008442.1 MGP_WSBEiJ_G0006831.1 mouse_genomes_project 6 38916781 38925252 + 5830405F06Rik lincRNA lincRNA MGP_WSBEiJ_T0008443.1 MGP_WSBEiJ_G0006831.1 mouse_genomes_project 6 38916782 38923284 + 5830405F06Rik lincRNA lincRNA MGP_WSBEiJ_T0014945.1 MGP_WSBEiJ_G0013075.1 mouse_genomes_project 6 65898745 65899504 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075994.1 MGP_WSBEiJ_G0029828.1 mouse_genomes_project 6 40393236 40394166 + MGP_WSBEiJ_P0075994 Tas2r126 protein_coding protein_coding MGP_WSBEiJ_T0078563.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122623787 122693121 - Mical3 protein_coding processed_transcript MGP_WSBEiJ_T0078564.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122623806 122672773 - MGP_WSBEiJ_P0078564 Mical3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078565.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122626861 122651022 - Mical3 protein_coding processed_transcript MGP_WSBEiJ_T0078566.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122626905 122627616 - Mical3 protein_coding retained_intron MGP_WSBEiJ_T0078567.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122650729 122693121 - Mical3 protein_coding processed_transcript MGP_WSBEiJ_T0078568.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122652398 122660035 - Mical3 protein_coding processed_transcript MGP_WSBEiJ_T0078569.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122687377 122716537 - MGP_WSBEiJ_P0078569 Mical3 protein_coding protein_coding MGP_WSBEiJ_T0078570.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122697209 122775231 - MGP_WSBEiJ_P0078570 Mical3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078571.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122697209 122775233 - MGP_WSBEiJ_P0078571 Mical3 protein_coding protein_coding MGP_WSBEiJ_T0078572.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122697210 122716552 - MGP_WSBEiJ_P0078572 Mical3 protein_coding protein_coding MGP_WSBEiJ_T0078573.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122708364 122809667 - Mical3 protein_coding retained_intron MGP_WSBEiJ_T0078574.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122708364 122716574 - Mical3 protein_coding processed_transcript MGP_WSBEiJ_T0078575.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122716495 122830583 - MGP_WSBEiJ_P0078575 Mical3 protein_coding protein_coding MGP_WSBEiJ_T0078576.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122716674 122720049 - Mical3 protein_coding retained_intron MGP_WSBEiJ_T0078577.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122719035 122719695 - Mical3 protein_coding processed_transcript MGP_WSBEiJ_T0078578.1 MGP_WSBEiJ_G0030382.1 mouse_genomes_project 6 122723240 122725065 - Mical3 protein_coding retained_intron MGP_WSBEiJ_T0077776.1 MGP_WSBEiJ_G0030241.1 mouse_genomes_project 6 97187323 97189070 - MGP_WSBEiJ_P0077776 1700123L14Rik protein_coding protein_coding MGP_WSBEiJ_T0014980.1 MGP_WSBEiJ_G0013110.1 mouse_genomes_project 6 75254449 75254951 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002146.1 MGP_WSBEiJ_G0002065.1 mouse_genomes_project 6 152932643 152936595 - TEC TEC MGP_WSBEiJ_T0075719.1 MGP_WSBEiJ_G0029745.1 mouse_genomes_project 6 32916598 32929288 - MGP_WSBEiJ_P0075719 Fam180a protein_coding protein_coding MGP_WSBEiJ_T0014823.1 MGP_WSBEiJ_G0012953.1 mouse_genomes_project 6 19917025 19918209 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002112.1 MGP_WSBEiJ_G0002031.1 mouse_genomes_project 6 137299567 137301396 + TEC TEC MGP_WSBEiJ_T0099688.1 MGP_WSBEiJ_G0038351.1 mouse_genomes_project 6 126333992 126334124 - Gm25311 snoRNA snoRNA MGP_WSBEiJ_T0076064.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45720815 45728624 - MGP_WSBEiJ_P0076064 Ezh2 protein_coding protein_coding MGP_WSBEiJ_T0076065.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45720815 45786299 - MGP_WSBEiJ_P0076065 Ezh2 protein_coding protein_coding MGP_WSBEiJ_T0076066.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45720815 45786299 - MGP_WSBEiJ_P0076066 Ezh2 protein_coding protein_coding MGP_WSBEiJ_T0076067.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45720815 45786299 - MGP_WSBEiJ_P0076067 Ezh2 protein_coding protein_coding MGP_WSBEiJ_T0076068.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45720995 45722793 - Ezh2 protein_coding retained_intron MGP_WSBEiJ_T0076069.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45721217 45766768 - MGP_WSBEiJ_P0076069 Ezh2 protein_coding protein_coding MGP_WSBEiJ_T0076070.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45722686 45725802 - Ezh2 protein_coding retained_intron MGP_WSBEiJ_T0076071.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45723306 45728598 - Ezh2 protein_coding retained_intron MGP_WSBEiJ_T0076072.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45724418 45734309 - Ezh2 protein_coding retained_intron MGP_WSBEiJ_T0076073.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45728731 45740188 - MGP_WSBEiJ_P0076073 Ezh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076074.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45732431 45740188 - MGP_WSBEiJ_P0076074 Ezh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076075.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45734208 45743451 - MGP_WSBEiJ_P0076075 Ezh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076076.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45734261 45786327 - MGP_WSBEiJ_P0076076 Ezh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076077.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45740810 45786610 - MGP_WSBEiJ_P0076077 Ezh2 protein_coding protein_coding MGP_WSBEiJ_T0076078.1 MGP_WSBEiJ_G0029857.1 mouse_genomes_project 6 45745262 45767115 - Ezh2 protein_coding processed_transcript MGP_WSBEiJ_T0015096.1 MGP_WSBEiJ_G0013226.1 mouse_genomes_project 6 122245563 122245900 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015026.1 MGP_WSBEiJ_G0013156.1 mouse_genomes_project 6 95407193 95407609 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100300.1 MGP_WSBEiJ_G0038802.1 mouse_genomes_project 6 85652600 85653564 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100301.1 MGP_WSBEiJ_G0038802.1 mouse_genomes_project 6 85652803 85653819 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0075344.1 MGP_WSBEiJ_G0029686.1 mouse_genomes_project 6 25964111 26139936 - MGP_WSBEiJ_P0075344 Lrrc4 protein_coding protein_coding MGP_WSBEiJ_T0075349.1 MGP_WSBEiJ_G0029686.1 mouse_genomes_project 6 26137723 26141338 - MGP_WSBEiJ_P0075349 Lrrc4 protein_coding protein_coding MGP_WSBEiJ_T0075394.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26743906 26747047 + Ccdc136 protein_coding processed_transcript MGP_WSBEiJ_T0075395.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26744227 26774427 + MGP_WSBEiJ_P0075395 Ccdc136 protein_coding protein_coding MGP_WSBEiJ_T0075396.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26744240 26774422 + MGP_WSBEiJ_P0075396 Ccdc136 protein_coding protein_coding MGP_WSBEiJ_T0075397.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26744282 26769566 + MGP_WSBEiJ_P0075397 Ccdc136 protein_coding unknown_likely_coding MGP_WSBEiJ_T0075398.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26744282 26774468 + MGP_WSBEiJ_P0075398 Ccdc136 protein_coding protein_coding MGP_WSBEiJ_T0075399.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26746523 26774422 + MGP_WSBEiJ_P0075399 Ccdc136 protein_coding protein_coding MGP_WSBEiJ_T0075400.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26746523 26774429 + MGP_WSBEiJ_P0075400 Ccdc136 protein_coding protein_coding MGP_WSBEiJ_T0075401.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26750358 26774331 + MGP_WSBEiJ_P0075401 Ccdc136 protein_coding protein_coding MGP_WSBEiJ_T0075402.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26757578 26774462 + MGP_WSBEiJ_P0075402 Ccdc136 protein_coding protein_coding MGP_WSBEiJ_T0075403.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26759957 26774426 + Ccdc136 protein_coding processed_transcript MGP_WSBEiJ_T0075404.1 MGP_WSBEiJ_G0029696.1 mouse_genomes_project 6 26762425 26774428 + Ccdc136 protein_coding processed_transcript MGP_WSBEiJ_T0077275.1 MGP_WSBEiJ_G0030138.1 mouse_genomes_project 6 86627844 86633632 + Figla protein_coding processed_transcript MGP_WSBEiJ_T0077276.1 MGP_WSBEiJ_G0030138.1 mouse_genomes_project 6 86630030 86633842 + MGP_WSBEiJ_P0077276 Figla protein_coding protein_coding MGP_WSBEiJ_T0015036.1 MGP_WSBEiJ_G0013166.1 mouse_genomes_project 6 99900993 99901273 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099698.1 MGP_WSBEiJ_G0038361.1 mouse_genomes_project 6 149240618 149240733 + Gm25373 snoRNA snoRNA MGP_WSBEiJ_T0075637.1 MGP_WSBEiJ_G0029733.1 mouse_genomes_project 6 31955081 31968609 + MGP_WSBEiJ_P0075637 Akr1b7 protein_coding protein_coding MGP_WSBEiJ_T0075638.1 MGP_WSBEiJ_G0029733.1 mouse_genomes_project 6 31955157 31968613 + MGP_WSBEiJ_P0075638 Akr1b7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0001946.1 MGP_WSBEiJ_G0001866.1 mouse_genomes_project 6 51104362 51108107 - TEC TEC MGP_WSBEiJ_T0079587.1 MGP_WSBEiJ_G0030633.1 mouse_genomes_project 6 146255681 146372297 - MGP_WSBEiJ_P0079587 Abcc9 protein_coding protein_coding MGP_WSBEiJ_T0079588.1 MGP_WSBEiJ_G0030633.1 mouse_genomes_project 6 146255681 146372241 - MGP_WSBEiJ_P0079588 Abcc9 protein_coding protein_coding MGP_WSBEiJ_T0079589.1 MGP_WSBEiJ_G0030633.1 mouse_genomes_project 6 146255681 146372297 - MGP_WSBEiJ_P0079589 Abcc9 protein_coding protein_coding MGP_WSBEiJ_T0079590.1 MGP_WSBEiJ_G0030633.1 mouse_genomes_project 6 146256949 146372241 - MGP_WSBEiJ_P0079590 Abcc9 protein_coding protein_coding MGP_WSBEiJ_T0079591.1 MGP_WSBEiJ_G0030633.1 mouse_genomes_project 6 146261742 146372296 - MGP_WSBEiJ_P0079591 Abcc9 protein_coding protein_coding MGP_WSBEiJ_T0079592.1 MGP_WSBEiJ_G0030633.1 mouse_genomes_project 6 146362035 146372338 - MGP_WSBEiJ_P0079592 Abcc9 protein_coding protein_coding MGP_WSBEiJ_T0099649.1 MGP_WSBEiJ_G0038312.1 mouse_genomes_project 6 52417956 52418088 - Gm22910 snoRNA snoRNA MGP_WSBEiJ_T0077867.1 MGP_WSBEiJ_G0030258.1 mouse_genomes_project 6 101961719 102062962 + MGP_WSBEiJ_P0077867 Gxylt2 protein_coding protein_coding MGP_WSBEiJ_T0077868.1 MGP_WSBEiJ_G0030258.1 mouse_genomes_project 6 101961740 101964650 + Gxylt2 protein_coding processed_transcript MGP_WSBEiJ_T0078389.1 MGP_WSBEiJ_G0030355.1 mouse_genomes_project 6 119924257 119962521 - MGP_WSBEiJ_P0078389 Bms1 protein_coding protein_coding MGP_WSBEiJ_T0078390.1 MGP_WSBEiJ_G0030355.1 mouse_genomes_project 6 119939410 119962451 - Bms1 protein_coding retained_intron MGP_WSBEiJ_T0078391.1 MGP_WSBEiJ_G0030355.1 mouse_genomes_project 6 119956880 119962459 - Bms1 protein_coding processed_transcript MGP_WSBEiJ_T0002104.1 MGP_WSBEiJ_G0002023.1 mouse_genomes_project 6 130476814 130478247 - TEC TEC MGP_WSBEiJ_T0017706.1 MGP_WSBEiJ_G0015066.1 mouse_genomes_project 6 122758626 122764092 + Gm4651 processed_transcript antisense MGP_WSBEiJ_T0017707.1 MGP_WSBEiJ_G0015066.1 mouse_genomes_project 6 122758758 122760248 + Gm4651 processed_transcript retained_intron MGP_WSBEiJ_T0097080.1 MGP_WSBEiJ_G0035761.1 mouse_genomes_project 6 27760729 27760825 - Gm25625 rRNA rRNA MGP_WSBEiJ_T0079249.1 MGP_WSBEiJ_G0030551.1 mouse_genomes_project 6 135920978 135921962 - MGP_WSBEiJ_P0079249 Tas2r136 protein_coding protein_coding MGP_WSBEiJ_T0075041.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5433467 5584255 - MGP_WSBEiJ_P0075041 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0075042.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5433467 5584540 - MGP_WSBEiJ_P0075042 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0075043.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5433467 5584585 - MGP_WSBEiJ_P0075043 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0075044.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5433467 5562851 - MGP_WSBEiJ_P0075044 Ica1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075045.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5433639 5449417 - Ica1 protein_coding processed_transcript MGP_WSBEiJ_T0075046.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5460730 5584255 - MGP_WSBEiJ_P0075046 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0075047.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5461437 5480932 - MGP_WSBEiJ_P0075047 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0075048.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5461447 5584588 - MGP_WSBEiJ_P0075048 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0075049.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5461448 5541561 - MGP_WSBEiJ_P0075049 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0075050.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5534908 5584589 - Ica1 protein_coding processed_transcript MGP_WSBEiJ_T0075051.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5554190 5575824 - MGP_WSBEiJ_P0075051 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0075052.1 MGP_WSBEiJ_G0029626.1 mouse_genomes_project 6 5559085 5584224 - MGP_WSBEiJ_P0075052 Ica1 protein_coding protein_coding MGP_WSBEiJ_T0014844.1 MGP_WSBEiJ_G0012974.1 mouse_genomes_project 6 35539437 35540162 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076961.1 MGP_WSBEiJ_G0030078.1 mouse_genomes_project 6 83403120 83405657 - MGP_WSBEiJ_P0076961 Dok1 protein_coding protein_coding MGP_WSBEiJ_T0076962.1 MGP_WSBEiJ_G0030078.1 mouse_genomes_project 6 83403126 83405654 - MGP_WSBEiJ_P0076962 Dok1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076963.1 MGP_WSBEiJ_G0030078.1 mouse_genomes_project 6 83404036 83404747 - MGP_WSBEiJ_P0076963 Dok1 protein_coding protein_coding MGP_WSBEiJ_T0076527.1 MGP_WSBEiJ_G0029975.1 mouse_genomes_project 6 56454615 56459907 - MGP_WSBEiJ_P0076527 Pyurf protein_coding protein_coding MGP_WSBEiJ_T0004923.1 MGP_WSBEiJ_G0004213.1 mouse_genomes_project 6 84541448 84554238 - Gm15475 antisense antisense MGP_WSBEiJ_T0000197.1 MGP_WSBEiJ_G0000148.1 mouse_genomes_project 6 69894463 69894768 - MGP_WSBEiJ_P0000197 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000198.1 MGP_WSBEiJ_G0000148.1 mouse_genomes_project 6 69894463 69895041 - MGP_WSBEiJ_P0000198 IG_V_gene IG_V_gene MGP_WSBEiJ_T0001994.1 MGP_WSBEiJ_G0001914.1 mouse_genomes_project 6 80794443 80797141 + TEC TEC MGP_WSBEiJ_T0000305.1 MGP_WSBEiJ_G0000253.1 mouse_genomes_project 6 70420277 70420858 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0010615.1 MGP_WSBEiJ_G0008772.1 mouse_genomes_project 6 100226131 100226278 - miRNA miRNA MGP_WSBEiJ_T0014921.1 MGP_WSBEiJ_G0013051.1 mouse_genomes_project 6 61895431 61895668 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078370.1 MGP_WSBEiJ_G0030350.1 mouse_genomes_project 6 119416884 119446835 + MGP_WSBEiJ_P0078370 protein_coding protein_coding MGP_WSBEiJ_T0078371.1 MGP_WSBEiJ_G0030350.1 mouse_genomes_project 6 119424274 119446815 + MGP_WSBEiJ_P0078371 protein_coding protein_coding MGP_WSBEiJ_T0075735.1 MGP_WSBEiJ_G0029750.1 mouse_genomes_project 6 34960969 35083197 - MGP_WSBEiJ_P0075735 Creb3l2 protein_coding protein_coding MGP_WSBEiJ_T0075736.1 MGP_WSBEiJ_G0029750.1 mouse_genomes_project 6 34966911 34972323 - Creb3l2 protein_coding processed_transcript MGP_WSBEiJ_T0077854.1 MGP_WSBEiJ_G0030253.1 mouse_genomes_project 6 100804002 100845531 - MGP_WSBEiJ_P0077854 Eif4e3 protein_coding protein_coding MGP_WSBEiJ_T0079391.1 MGP_WSBEiJ_G0030593.1 mouse_genomes_project 6 140221624 140238177 - MGP_WSBEiJ_P0079391 Smco3 protein_coding protein_coding MGP_WSBEiJ_T0079392.1 MGP_WSBEiJ_G0030593.1 mouse_genomes_project 6 140222057 140238106 - MGP_WSBEiJ_P0079392 Smco3 protein_coding protein_coding MGP_WSBEiJ_T0000200.1 MGP_WSBEiJ_G0000150.1 mouse_genomes_project 6 70105491 70384977 + MGP_WSBEiJ_P0000200 IG_V_gene IG_V_gene MGP_WSBEiJ_T0078218.1 MGP_WSBEiJ_G0030321.1 mouse_genomes_project 6 117007267 117018109 - MGP_WSBEiJ_P0078218 Mkrn2os protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078219.1 MGP_WSBEiJ_G0030321.1 mouse_genomes_project 6 117008844 117018136 - MGP_WSBEiJ_P0078219 Mkrn2os protein_coding protein_coding MGP_WSBEiJ_T0008400.1 MGP_WSBEiJ_G0006806.1 mouse_genomes_project 6 28487006 28487410 - Gm27019 lincRNA lincRNA MGP_WSBEiJ_T0015027.1 MGP_WSBEiJ_G0013157.1 mouse_genomes_project 6 95477614 95477833 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079260.1 MGP_WSBEiJ_G0030562.1 mouse_genomes_project 6 136222787 136223787 - MGP_WSBEiJ_P0079260 Tas2r140 protein_coding protein_coding MGP_WSBEiJ_T0079169.1 MGP_WSBEiJ_G0030516.1 mouse_genomes_project 6 131989354 132019315 - MGP_WSBEiJ_P0079169 Clec1a protein_coding protein_coding MGP_WSBEiJ_T0079170.1 MGP_WSBEiJ_G0030516.1 mouse_genomes_project 6 131990403 132019451 - MGP_WSBEiJ_P0079170 Clec1a protein_coding protein_coding MGP_WSBEiJ_T0079171.1 MGP_WSBEiJ_G0030516.1 mouse_genomes_project 6 131990474 132019435 - MGP_WSBEiJ_P0079171 Clec1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078908.1 MGP_WSBEiJ_G0030453.1 mouse_genomes_project 6 127259106 127274973 + MGP_WSBEiJ_P0078908 Nop2 protein_coding protein_coding MGP_WSBEiJ_T0078909.1 MGP_WSBEiJ_G0030453.1 mouse_genomes_project 6 127259244 127263330 + MGP_WSBEiJ_P0078909 Nop2 protein_coding protein_coding MGP_WSBEiJ_T0077957.1 MGP_WSBEiJ_G0030278.1 mouse_genomes_project 6 113877688 113891039 + MGP_WSBEiJ_P0077957 Cav3 protein_coding protein_coding MGP_WSBEiJ_T0014931.1 MGP_WSBEiJ_G0013061.1 mouse_genomes_project 6 64508705 64510105 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075747.1 MGP_WSBEiJ_G0029753.1 mouse_genomes_project 6 35657066 35721514 - MGP_WSBEiJ_P0075747 Svopl protein_coding protein_coding MGP_WSBEiJ_T0075748.1 MGP_WSBEiJ_G0029753.1 mouse_genomes_project 6 35657839 35704642 - MGP_WSBEiJ_P0075748 Svopl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075749.1 MGP_WSBEiJ_G0029753.1 mouse_genomes_project 6 35687851 35696314 - Svopl protein_coding retained_intron MGP_WSBEiJ_T0075750.1 MGP_WSBEiJ_G0029753.1 mouse_genomes_project 6 35688153 35691651 - Svopl protein_coding retained_intron MGP_WSBEiJ_T0075751.1 MGP_WSBEiJ_G0029753.1 mouse_genomes_project 6 35688306 35721514 - Svopl protein_coding retained_intron MGP_WSBEiJ_T0002094.1 MGP_WSBEiJ_G0002013.1 mouse_genomes_project 6 126409287 126412182 - TEC TEC MGP_WSBEiJ_T0002097.1 MGP_WSBEiJ_G0002016.1 mouse_genomes_project 6 128759522 128760052 - TEC TEC MGP_WSBEiJ_T0079258.1 MGP_WSBEiJ_G0030560.1 mouse_genomes_project 6 136121980 136123016 - MGP_WSBEiJ_P0079258 Tas2r131 protein_coding protein_coding MGP_WSBEiJ_T0000290.1 MGP_WSBEiJ_G0000238.1 mouse_genomes_project 6 69013846 69014321 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0015040.1 MGP_WSBEiJ_G0013170.1 mouse_genomes_project 6 101027966 101028502 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076347.1 MGP_WSBEiJ_G0029926.1 mouse_genomes_project 6 51050389 51148744 - MGP_WSBEiJ_P0076347 Hibadh protein_coding protein_coding MGP_WSBEiJ_T0076348.1 MGP_WSBEiJ_G0029926.1 mouse_genomes_project 6 51050857 51136939 - Hibadh protein_coding retained_intron MGP_WSBEiJ_T0076349.1 MGP_WSBEiJ_G0029926.1 mouse_genomes_project 6 51053012 51060997 - Hibadh protein_coding retained_intron MGP_WSBEiJ_T0076350.1 MGP_WSBEiJ_G0029926.1 mouse_genomes_project 6 51058497 51060599 - Hibadh protein_coding retained_intron MGP_WSBEiJ_T0076351.1 MGP_WSBEiJ_G0029926.1 mouse_genomes_project 6 51142788 51148670 - Hibadh protein_coding retained_intron MGP_WSBEiJ_T0014991.1 MGP_WSBEiJ_G0013121.1 mouse_genomes_project 6 81739933 81740386 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076022.1 MGP_WSBEiJ_G0029843.1 mouse_genomes_project 6 40900513 40903521 + MGP_WSBEiJ_P0076022 Olfr446 protein_coding protein_coding MGP_WSBEiJ_T0075918.1 MGP_WSBEiJ_G0029804.1 mouse_genomes_project 6 39250206 39253161 - MGP_WSBEiJ_P0075918 protein_coding protein_coding MGP_WSBEiJ_T0010618.1 MGP_WSBEiJ_G0008775.1 mouse_genomes_project 6 106771213 106771293 + Gm25570 miRNA miRNA MGP_WSBEiJ_T0005030.1 MGP_WSBEiJ_G0004291.1 mouse_genomes_project 6 141928536 141936566 + A830011K09Rik antisense antisense MGP_WSBEiJ_T0005031.1 MGP_WSBEiJ_G0004291.1 mouse_genomes_project 6 141928631 141935288 + A830011K09Rik antisense antisense MGP_WSBEiJ_T0005032.1 MGP_WSBEiJ_G0004291.1 mouse_genomes_project 6 141928702 141937187 + A830011K09Rik antisense antisense MGP_WSBEiJ_T0079840.1 MGP_WSBEiJ_G0030674.1 mouse_genomes_project 6 153018811 153019473 + MGP_WSBEiJ_P0079840 protein_coding protein_coding MGP_WSBEiJ_T0004948.1 MGP_WSBEiJ_G0004227.1 mouse_genomes_project 6 89238860 89239533 + Gm44170 antisense antisense MGP_WSBEiJ_T0075318.1 MGP_WSBEiJ_G0029680.1 mouse_genomes_project 6 25523827 25547040 - MGP_WSBEiJ_P0075318 Zfp800 protein_coding protein_coding MGP_WSBEiJ_T0075319.1 MGP_WSBEiJ_G0029680.1 mouse_genomes_project 6 25524140 25690938 - MGP_WSBEiJ_P0075319 Zfp800 protein_coding protein_coding MGP_WSBEiJ_T0075320.1 MGP_WSBEiJ_G0029680.1 mouse_genomes_project 6 25526029 25547052 - MGP_WSBEiJ_P0075320 Zfp800 protein_coding protein_coding MGP_WSBEiJ_T0075321.1 MGP_WSBEiJ_G0029680.1 mouse_genomes_project 6 25528118 25547043 - MGP_WSBEiJ_P0075321 Zfp800 protein_coding protein_coding MGP_WSBEiJ_T0075322.1 MGP_WSBEiJ_G0029680.1 mouse_genomes_project 6 25529045 25547061 - MGP_WSBEiJ_P0075322 Zfp800 protein_coding protein_coding MGP_WSBEiJ_T0005036.1 MGP_WSBEiJ_G0004295.1 mouse_genomes_project 6 146281765 146294433 + 5330439B14Rik antisense antisense MGP_WSBEiJ_T0005034.1 MGP_WSBEiJ_G0004293.1 mouse_genomes_project 6 142109907 142130159 + B230110G15Rik antisense antisense MGP_WSBEiJ_T0017629.1 MGP_WSBEiJ_G0015043.1 mouse_genomes_project 6 28172 34905 - processed_transcript lincRNA MGP_WSBEiJ_T0017630.1 MGP_WSBEiJ_G0015043.1 mouse_genomes_project 6 30531 34944 - processed_transcript lincRNA MGP_WSBEiJ_T0017631.1 MGP_WSBEiJ_G0015043.1 mouse_genomes_project 6 30724 34976 - processed_transcript retained_intron MGP_WSBEiJ_T0079547.1 MGP_WSBEiJ_G0030623.1 mouse_genomes_project 6 145760566 145847812 - MGP_WSBEiJ_P0079547 Slco1a6 protein_coding protein_coding MGP_WSBEiJ_T0079548.1 MGP_WSBEiJ_G0030623.1 mouse_genomes_project 6 145789046 145847808 - Slco1a6 protein_coding retained_intron MGP_WSBEiJ_T0079549.1 MGP_WSBEiJ_G0030623.1 mouse_genomes_project 6 145827158 145869229 - MGP_WSBEiJ_P0079549 Slco1a6 protein_coding protein_coding MGP_WSBEiJ_T0075405.1 MGP_WSBEiJ_G0029697.1 mouse_genomes_project 6 26780773 26786586 + Flnc protein_coding retained_intron MGP_WSBEiJ_T0075406.1 MGP_WSBEiJ_G0029697.1 mouse_genomes_project 6 26780793 26810378 + MGP_WSBEiJ_P0075406 Flnc protein_coding protein_coding MGP_WSBEiJ_T0075407.1 MGP_WSBEiJ_G0029697.1 mouse_genomes_project 6 26780793 26810378 + MGP_WSBEiJ_P0075407 Flnc protein_coding protein_coding MGP_WSBEiJ_T0077911.1 MGP_WSBEiJ_G0030267.1 mouse_genomes_project 6 108193680 108213715 - MGP_WSBEiJ_P0077911 Crbn protein_coding protein_coding MGP_WSBEiJ_T0077912.1 MGP_WSBEiJ_G0030267.1 mouse_genomes_project 6 108193680 108213706 - MGP_WSBEiJ_P0077912 Crbn protein_coding protein_coding MGP_WSBEiJ_T0077913.1 MGP_WSBEiJ_G0030267.1 mouse_genomes_project 6 108197179 108212686 - MGP_WSBEiJ_P0077913 Crbn protein_coding protein_coding MGP_WSBEiJ_T0077914.1 MGP_WSBEiJ_G0030267.1 mouse_genomes_project 6 108202461 108213702 - Crbn protein_coding retained_intron MGP_WSBEiJ_T0077915.1 MGP_WSBEiJ_G0030267.1 mouse_genomes_project 6 108210832 108213718 - Crbn protein_coding retained_intron MGP_WSBEiJ_T0078509.1 MGP_WSBEiJ_G0030370.1 mouse_genomes_project 6 121845328 121946942 - MGP_WSBEiJ_P0078509 B4galnt3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078510.1 MGP_WSBEiJ_G0030370.1 mouse_genomes_project 6 121847661 121889956 - B4galnt3 protein_coding processed_transcript MGP_WSBEiJ_T0078511.1 MGP_WSBEiJ_G0030370.1 mouse_genomes_project 6 121847682 121946942 - MGP_WSBEiJ_P0078511 B4galnt3 protein_coding protein_coding MGP_WSBEiJ_T0014785.1 MGP_WSBEiJ_G0012915.1 mouse_genomes_project 6 3981115 3981706 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000301.1 MGP_WSBEiJ_G0000249.1 mouse_genomes_project 6 70207589 70207861 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0078706.1 MGP_WSBEiJ_G0030414.1 mouse_genomes_project 6 125192115 125234136 + MGP_WSBEiJ_P0078706 protein_coding protein_coding MGP_WSBEiJ_T0075220.1 MGP_WSBEiJ_G0029655.1 mouse_genomes_project 6 19054146 19081977 + MGP_WSBEiJ_P0075220 Ing3 protein_coding protein_coding MGP_WSBEiJ_T0075221.1 MGP_WSBEiJ_G0029655.1 mouse_genomes_project 6 19054272 19080466 + Ing3 protein_coding retained_intron MGP_WSBEiJ_T0075222.1 MGP_WSBEiJ_G0029655.1 mouse_genomes_project 6 19054277 19080067 + MGP_WSBEiJ_P0075222 Ing3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075223.1 MGP_WSBEiJ_G0029655.1 mouse_genomes_project 6 19054280 19080839 + MGP_WSBEiJ_P0075223 Ing3 protein_coding protein_coding MGP_WSBEiJ_T0075224.1 MGP_WSBEiJ_G0029655.1 mouse_genomes_project 6 19054293 19075950 + MGP_WSBEiJ_P0075224 Ing3 protein_coding protein_coding MGP_WSBEiJ_T0075225.1 MGP_WSBEiJ_G0029655.1 mouse_genomes_project 6 19054308 19079662 + MGP_WSBEiJ_P0075225 Ing3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075226.1 MGP_WSBEiJ_G0029655.1 mouse_genomes_project 6 19054642 19072693 + MGP_WSBEiJ_P0075226 Ing3 protein_coding protein_coding MGP_WSBEiJ_T0075227.1 MGP_WSBEiJ_G0029655.1 mouse_genomes_project 6 19056752 19058996 + Ing3 protein_coding retained_intron MGP_WSBEiJ_T0077767.1 MGP_WSBEiJ_G0030238.1 mouse_genomes_project 6 96334752 96334851 + MGP_WSBEiJ_P0077767 Gm10234 protein_coding protein_coding MGP_WSBEiJ_T0004975.1 MGP_WSBEiJ_G0004244.1 mouse_genomes_project 6 112118863 112125036 - Gm20387 antisense antisense MGP_WSBEiJ_T0010587.1 MGP_WSBEiJ_G0008744.1 mouse_genomes_project 6 28486937 28487008 - Mir29b-1 miRNA miRNA MGP_WSBEiJ_T0015188.1 MGP_WSBEiJ_G0013318.1 mouse_genomes_project 6 149084762 149085758 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001970.1 MGP_WSBEiJ_G0001890.1 mouse_genomes_project 6 72600262 72602941 - TEC TEC MGP_WSBEiJ_T0015122.1 MGP_WSBEiJ_G0013252.1 mouse_genomes_project 6 127390909 127391207 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098432.1 MGP_WSBEiJ_G0037095.1 mouse_genomes_project 6 97609693 97609797 - Gm26011 snRNA snRNA MGP_WSBEiJ_T0015135.1 MGP_WSBEiJ_G0013265.1 mouse_genomes_project 6 130914455 130914861 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077797.1 MGP_WSBEiJ_G0030247.1 mouse_genomes_project 6 98282656 98299015 - MGP_WSBEiJ_P0077797 Lmod3 protein_coding protein_coding MGP_WSBEiJ_T0078332.1 MGP_WSBEiJ_G0030343.1 mouse_genomes_project 6 118130387 118135344 - MGP_WSBEiJ_P0078332 Zfp422 protein_coding protein_coding MGP_WSBEiJ_T0078333.1 MGP_WSBEiJ_G0030343.1 mouse_genomes_project 6 118131253 118135046 - MGP_WSBEiJ_P0078333 Zfp422 protein_coding protein_coding MGP_WSBEiJ_T0078334.1 MGP_WSBEiJ_G0030343.1 mouse_genomes_project 6 118131253 118135267 - MGP_WSBEiJ_P0078334 Zfp422 protein_coding protein_coding MGP_WSBEiJ_T0078335.1 MGP_WSBEiJ_G0030343.1 mouse_genomes_project 6 118131271 118132969 - Zfp422 protein_coding processed_transcript MGP_WSBEiJ_T0077983.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114520943 114550974 + Setd5 protein_coding retained_intron MGP_WSBEiJ_T0077984.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114520943 114599695 + MGP_WSBEiJ_P0077984 Setd5 protein_coding protein_coding MGP_WSBEiJ_T0077985.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114521139 114549732 + Setd5 protein_coding processed_transcript MGP_WSBEiJ_T0077986.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114521180 114561029 + Setd5 protein_coding processed_transcript MGP_WSBEiJ_T0077987.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114521217 114599684 + MGP_WSBEiJ_P0077987 Setd5 protein_coding protein_coding MGP_WSBEiJ_T0077988.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114548347 114582508 + Setd5 protein_coding processed_transcript MGP_WSBEiJ_T0077989.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114548449 114599695 + MGP_WSBEiJ_P0077989 Setd5 protein_coding protein_coding MGP_WSBEiJ_T0077990.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114552285 114561343 + Setd5 protein_coding retained_intron MGP_WSBEiJ_T0077991.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114552557 114599694 + MGP_WSBEiJ_P0077991 Setd5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0077992.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114553277 114598096 + Setd5 protein_coding retained_intron MGP_WSBEiJ_T0077993.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114553829 114557102 + Setd5 protein_coding retained_intron MGP_WSBEiJ_T0077994.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114553829 114560998 + Setd5 protein_coding retained_intron MGP_WSBEiJ_T0077995.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114569591 114574625 + Setd5 protein_coding retained_intron MGP_WSBEiJ_T0077996.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114571991 114598116 + Setd5 protein_coding retained_intron MGP_WSBEiJ_T0077997.1 MGP_WSBEiJ_G0030283.1 mouse_genomes_project 6 114572923 114582744 + Setd5 protein_coding processed_transcript MGP_WSBEiJ_T0015079.1 MGP_WSBEiJ_G0013209.1 mouse_genomes_project 6 115667262 115667902 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015072.1 MGP_WSBEiJ_G0013202.1 mouse_genomes_project 6 114427543 114427670 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075802.1 MGP_WSBEiJ_G0029764.1 mouse_genomes_project 6 36384127 36403840 + MGP_WSBEiJ_P0075802 Clec2l protein_coding protein_coding MGP_WSBEiJ_T0076221.1 MGP_WSBEiJ_G0029895.1 mouse_genomes_project 6 47347293 47360843 + MGP_WSBEiJ_P0076221 Malsu1 protein_coding protein_coding MGP_WSBEiJ_T0076222.1 MGP_WSBEiJ_G0029895.1 mouse_genomes_project 6 47347346 47360843 + MGP_WSBEiJ_P0076222 Malsu1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076223.1 MGP_WSBEiJ_G0029895.1 mouse_genomes_project 6 47347390 47353652 + Malsu1 protein_coding processed_transcript MGP_WSBEiJ_T0076224.1 MGP_WSBEiJ_G0029895.1 mouse_genomes_project 6 47347572 47357626 + Malsu1 protein_coding processed_transcript MGP_WSBEiJ_T0076225.1 MGP_WSBEiJ_G0029895.1 mouse_genomes_project 6 47356676 47358770 + Malsu1 protein_coding retained_intron MGP_WSBEiJ_T0079225.1 MGP_WSBEiJ_G0030533.1 mouse_genomes_project 6 134285966 134309552 - MGP_WSBEiJ_P0079225 Ybx3 protein_coding protein_coding MGP_WSBEiJ_T0079226.1 MGP_WSBEiJ_G0030533.1 mouse_genomes_project 6 134285966 134309514 - MGP_WSBEiJ_P0079226 Ybx3 protein_coding protein_coding MGP_WSBEiJ_T0079227.1 MGP_WSBEiJ_G0030533.1 mouse_genomes_project 6 134286201 134299329 - Ybx3 protein_coding processed_transcript MGP_WSBEiJ_T0079228.1 MGP_WSBEiJ_G0030533.1 mouse_genomes_project 6 134286211 134290099 - Ybx3 protein_coding retained_intron MGP_WSBEiJ_T0079229.1 MGP_WSBEiJ_G0030533.1 mouse_genomes_project 6 134297246 134299590 - Ybx3 protein_coding processed_transcript MGP_WSBEiJ_T0008403.1 MGP_WSBEiJ_G0006809.1 mouse_genomes_project 6 28526902 28528696 + Gm13833 lincRNA lincRNA MGP_WSBEiJ_T0004855.1 MGP_WSBEiJ_G0004167.1 mouse_genomes_project 6 36862406 36891632 + 4930599N23Rik antisense antisense MGP_WSBEiJ_T0015086.1 MGP_WSBEiJ_G0013216.1 mouse_genomes_project 6 118125676 118128896 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002027.1 MGP_WSBEiJ_G0001947.1 mouse_genomes_project 6 89254256 89255251 + TEC TEC MGP_WSBEiJ_T0014907.1 MGP_WSBEiJ_G0013037.1 mouse_genomes_project 6 57453905 57454335 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000208.1 MGP_WSBEiJ_G0000156.1 mouse_genomes_project 6 70420254 70420867 + MGP_WSBEiJ_P0000208 IG_V_gene IG_V_gene MGP_WSBEiJ_T0015021.1 MGP_WSBEiJ_G0013151.1 mouse_genomes_project 6 93459121 93460118 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098453.1 MGP_WSBEiJ_G0037116.1 mouse_genomes_project 6 132823300 132823375 + Gm24676 snRNA snRNA MGP_WSBEiJ_T0014869.1 MGP_WSBEiJ_G0012999.1 mouse_genomes_project 6 45996268 45996647 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097081.1 MGP_WSBEiJ_G0035762.1 mouse_genomes_project 6 27794512 27794626 + n-R5s161 rRNA rRNA MGP_WSBEiJ_T0017664.1 MGP_WSBEiJ_G0015051.1 mouse_genomes_project 6 50731473 50736873 + Hoxa11os processed_transcript antisense MGP_WSBEiJ_T0017665.1 MGP_WSBEiJ_G0015051.1 mouse_genomes_project 6 50732324 50736851 + Hoxa11os processed_transcript antisense MGP_WSBEiJ_T0017666.1 MGP_WSBEiJ_G0015051.1 mouse_genomes_project 6 50733050 50736877 + Hoxa11os processed_transcript antisense MGP_WSBEiJ_T0017667.1 MGP_WSBEiJ_G0015051.1 mouse_genomes_project 6 50733070 50736872 + Hoxa11os processed_transcript antisense MGP_WSBEiJ_T0017668.1 MGP_WSBEiJ_G0015051.1 mouse_genomes_project 6 50733302 50736462 + Hoxa11os processed_transcript retained_intron MGP_WSBEiJ_T0017669.1 MGP_WSBEiJ_G0015051.1 mouse_genomes_project 6 50735503 50736881 + Hoxa11os processed_transcript antisense MGP_WSBEiJ_T0077124.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84209500 84217078 + MGP_WSBEiJ_P0077124 Nagk protein_coding protein_coding MGP_WSBEiJ_T0077125.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84209546 84217076 + MGP_WSBEiJ_P0077125 Nagk protein_coding protein_coding MGP_WSBEiJ_T0077126.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84209679 84213140 + Nagk protein_coding retained_intron MGP_WSBEiJ_T0077127.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84209726 84216856 + Nagk protein_coding processed_transcript MGP_WSBEiJ_T0077128.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84209753 84217942 + MGP_WSBEiJ_P0077128 Nagk protein_coding protein_coding MGP_WSBEiJ_T0077129.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84210760 84211512 + Nagk protein_coding retained_intron MGP_WSBEiJ_T0077130.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84211550 84214790 + Nagk protein_coding retained_intron MGP_WSBEiJ_T0077131.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84212468 84213884 + Nagk protein_coding retained_intron MGP_WSBEiJ_T0077132.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84212501 84215654 + Nagk protein_coding processed_transcript MGP_WSBEiJ_T0077133.1 MGP_WSBEiJ_G0030110.1 mouse_genomes_project 6 84216669 84218540 + Nagk protein_coding retained_intron MGP_WSBEiJ_T0002096.1 MGP_WSBEiJ_G0002015.1 mouse_genomes_project 6 127205521 127206114 + TEC TEC MGP_WSBEiJ_T0077095.1 MGP_WSBEiJ_G0030102.1 mouse_genomes_project 6 83908653 83931379 - MGP_WSBEiJ_P0077095 Actg2 protein_coding protein_coding MGP_WSBEiJ_T0077096.1 MGP_WSBEiJ_G0030102.1 mouse_genomes_project 6 83908660 83923479 - MGP_WSBEiJ_P0077096 Actg2 protein_coding protein_coding MGP_WSBEiJ_T0077097.1 MGP_WSBEiJ_G0030102.1 mouse_genomes_project 6 83915408 83922414 - Actg2 protein_coding processed_transcript MGP_WSBEiJ_T0077098.1 MGP_WSBEiJ_G0030102.1 mouse_genomes_project 6 83915408 83931337 - MGP_WSBEiJ_P0077098 Actg2 protein_coding protein_coding MGP_WSBEiJ_T0077099.1 MGP_WSBEiJ_G0030102.1 mouse_genomes_project 6 83915549 83922979 - MGP_WSBEiJ_P0077099 Actg2 protein_coding protein_coding MGP_WSBEiJ_T0077100.1 MGP_WSBEiJ_G0030102.1 mouse_genomes_project 6 83916325 83923299 - MGP_WSBEiJ_P0077100 Actg2 protein_coding protein_coding MGP_WSBEiJ_T0014934.1 MGP_WSBEiJ_G0013064.1 mouse_genomes_project 6 64560713 64561908 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079243.1 MGP_WSBEiJ_G0030545.1 mouse_genomes_project 6 135793729 135794621 + MGP_WSBEiJ_P0079243 Tas2r120 protein_coding protein_coding MGP_WSBEiJ_T0001877.1 MGP_WSBEiJ_G0001797.1 mouse_genomes_project 6 3675131 3676485 - TEC TEC MGP_WSBEiJ_T0014779.1 MGP_WSBEiJ_G0012909.1 mouse_genomes_project 6 1283780 1286772 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011468.1 MGP_WSBEiJ_G0009625.1 mouse_genomes_project 6 124165667 124165922 - Gm27826 misc_RNA misc_RNA MGP_WSBEiJ_T0015078.1 MGP_WSBEiJ_G0013208.1 mouse_genomes_project 6 115553454 115553506 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076276.1 MGP_WSBEiJ_G0029907.1 mouse_genomes_project 6 49843713 49871609 + MGP_WSBEiJ_P0076276 Nfe2l3 protein_coding protein_coding MGP_WSBEiJ_T0076277.1 MGP_WSBEiJ_G0029907.1 mouse_genomes_project 6 49843792 49847968 + Nfe2l3 protein_coding processed_transcript MGP_WSBEiJ_T0076278.1 MGP_WSBEiJ_G0029907.1 mouse_genomes_project 6 49843792 49869717 + MGP_WSBEiJ_P0076278 Nfe2l3 protein_coding protein_coding MGP_WSBEiJ_T0014970.1 MGP_WSBEiJ_G0013100.1 mouse_genomes_project 6 71581856 71582440 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014787.1 MGP_WSBEiJ_G0012917.1 mouse_genomes_project 6 4330734 4331095 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014902.1 MGP_WSBEiJ_G0013032.1 mouse_genomes_project 6 56675180 56675549 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076415.1 MGP_WSBEiJ_G0029937.1 mouse_genomes_project 6 53193832 53239532 + MGP_WSBEiJ_P0076415 Plekha8 protein_coding protein_coding MGP_WSBEiJ_T0008454.1 MGP_WSBEiJ_G0006841.1 mouse_genomes_project 6 49145661 49184387 + C530044C16Rik lincRNA lincRNA MGP_WSBEiJ_T0008455.1 MGP_WSBEiJ_G0006841.1 mouse_genomes_project 6 49145870 49184526 + C530044C16Rik lincRNA lincRNA MGP_WSBEiJ_T0076095.1 MGP_WSBEiJ_G0029865.1 mouse_genomes_project 6 46243529 46267337 - MGP_WSBEiJ_P0076095 Zfp777 protein_coding protein_coding MGP_WSBEiJ_T0076096.1 MGP_WSBEiJ_G0029865.1 mouse_genomes_project 6 46243546 46269386 - MGP_WSBEiJ_P0076096 Zfp777 protein_coding protein_coding MGP_WSBEiJ_T0076097.1 MGP_WSBEiJ_G0029865.1 mouse_genomes_project 6 46248685 46263411 - MGP_WSBEiJ_P0076097 Zfp777 protein_coding protein_coding MGP_WSBEiJ_T0076098.1 MGP_WSBEiJ_G0029865.1 mouse_genomes_project 6 46263330 46267337 - MGP_WSBEiJ_P0076098 Zfp777 protein_coding protein_coding MGP_WSBEiJ_T0076099.1 MGP_WSBEiJ_G0029865.1 mouse_genomes_project 6 46263612 46266998 - MGP_WSBEiJ_P0076099 Zfp777 protein_coding protein_coding MGP_WSBEiJ_T0014801.1 MGP_WSBEiJ_G0012931.1 mouse_genomes_project 6 9890724 9891727 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100126.1 MGP_WSBEiJ_G0038720.1 mouse_genomes_project 6 40088885 40089732 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100127.1 MGP_WSBEiJ_G0038720.1 mouse_genomes_project 6 40089290 40089651 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0075371.1 MGP_WSBEiJ_G0029691.1 mouse_genomes_project 6 26606313 26609012 + MGP_WSBEiJ_P0075371 Hilpda protein_coding protein_coding MGP_WSBEiJ_T0075372.1 MGP_WSBEiJ_G0029691.1 mouse_genomes_project 6 26606451 26609272 + MGP_WSBEiJ_P0075372 Hilpda protein_coding protein_coding MGP_WSBEiJ_T0011448.1 MGP_WSBEiJ_G0009605.1 mouse_genomes_project 6 50734502 50734735 + Gm27817 misc_RNA misc_RNA MGP_WSBEiJ_T0015094.1 MGP_WSBEiJ_G0013224.1 mouse_genomes_project 6 121510315 121511199 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010583.1 MGP_WSBEiJ_G0008740.1 mouse_genomes_project 6 27568323 27568429 - Mir96 miRNA miRNA MGP_WSBEiJ_T0079329.1 MGP_WSBEiJ_G0030577.1 mouse_genomes_project 6 138351394 138371063 + MGP_WSBEiJ_P0079329 Gprc5a protein_coding protein_coding MGP_WSBEiJ_T0015166.1 MGP_WSBEiJ_G0013296.1 mouse_genomes_project 6 137078847 137079514 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077561.1 MGP_WSBEiJ_G0030187.1 mouse_genomes_project 6 89845566 89858685 + protein_coding lincRNA MGP_WSBEiJ_T0077562.1 MGP_WSBEiJ_G0030187.1 mouse_genomes_project 6 89845566 89860824 + protein_coding lincRNA MGP_WSBEiJ_T0077563.1 MGP_WSBEiJ_G0030187.1 mouse_genomes_project 6 89850702 89859005 + protein_coding lincRNA MGP_WSBEiJ_T0077564.1 MGP_WSBEiJ_G0030187.1 mouse_genomes_project 6 89851120 89860823 + MGP_WSBEiJ_P0077564 protein_coding protein_coding MGP_WSBEiJ_T0015023.1 MGP_WSBEiJ_G0013153.1 mouse_genomes_project 6 94594748 94595621 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077860.1 MGP_WSBEiJ_G0030256.1 mouse_genomes_project 6 101435828 101502744 - MGP_WSBEiJ_P0077860 Rybp protein_coding protein_coding MGP_WSBEiJ_T0077861.1 MGP_WSBEiJ_G0030256.1 mouse_genomes_project 6 101439441 101441390 - Rybp protein_coding retained_intron MGP_WSBEiJ_T0077862.1 MGP_WSBEiJ_G0030256.1 mouse_genomes_project 6 101441352 101499845 - Rybp protein_coding retained_intron MGP_WSBEiJ_T0078531.1 MGP_WSBEiJ_G0030374.1 mouse_genomes_project 6 122124405 122149513 + Il17ra protein_coding retained_intron MGP_WSBEiJ_T0078532.1 MGP_WSBEiJ_G0030374.1 mouse_genomes_project 6 122124405 122153739 + MGP_WSBEiJ_P0078532 Il17ra protein_coding protein_coding MGP_WSBEiJ_T0078533.1 MGP_WSBEiJ_G0030374.1 mouse_genomes_project 6 122138551 122144987 + Il17ra protein_coding processed_transcript MGP_WSBEiJ_T0001889.1 MGP_WSBEiJ_G0001809.1 mouse_genomes_project 6 18336254 18343514 + TEC TEC MGP_WSBEiJ_T0004848.1 MGP_WSBEiJ_G0004161.1 mouse_genomes_project 6 31822530 31859407 + Gm14546 antisense antisense MGP_WSBEiJ_T0014994.1 MGP_WSBEiJ_G0013124.1 mouse_genomes_project 6 83251624 83252818 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075128.1 MGP_WSBEiJ_G0029640.1 mouse_genomes_project 6 13759138 13831001 - MGP_WSBEiJ_P0075128 Tfec protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075129.1 MGP_WSBEiJ_G0029640.1 mouse_genomes_project 6 13759703 13795256 - MGP_WSBEiJ_P0075129 Tfec protein_coding protein_coding MGP_WSBEiJ_T0075130.1 MGP_WSBEiJ_G0029640.1 mouse_genomes_project 6 13760443 13761015 - MGP_WSBEiJ_P0075130 Tfec protein_coding protein_coding MGP_WSBEiJ_T0075131.1 MGP_WSBEiJ_G0029640.1 mouse_genomes_project 6 13768306 13831043 - Tfec protein_coding retained_intron MGP_WSBEiJ_T0075132.1 MGP_WSBEiJ_G0029640.1 mouse_genomes_project 6 13771087 13772887 - Tfec protein_coding retained_intron MGP_WSBEiJ_T0015189.1 MGP_WSBEiJ_G0013319.1 mouse_genomes_project 6 150819920 150820379 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014969.1 MGP_WSBEiJ_G0013099.1 mouse_genomes_project 6 71228520 71228919 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004987.1 MGP_WSBEiJ_G0004252.1 mouse_genomes_project 6 115423852 115426321 + Gm15082 antisense antisense MGP_WSBEiJ_T0077764.1 MGP_WSBEiJ_G0030237.1 mouse_genomes_project 6 96125765 96132927 + MGP_WSBEiJ_P0077764 Kbtbd8 protein_coding protein_coding MGP_WSBEiJ_T0077765.1 MGP_WSBEiJ_G0030237.1 mouse_genomes_project 6 96126428 96141348 + MGP_WSBEiJ_P0077765 Kbtbd8 protein_coding protein_coding MGP_WSBEiJ_T0077766.1 MGP_WSBEiJ_G0030237.1 mouse_genomes_project 6 96126505 96132834 + Kbtbd8 protein_coding processed_transcript MGP_WSBEiJ_T0002042.1 MGP_WSBEiJ_G0001962.1 mouse_genomes_project 6 92572905 92574736 + TEC TEC MGP_WSBEiJ_T0099669.1 MGP_WSBEiJ_G0038332.1 mouse_genomes_project 6 94845570 94845706 + Gm22840 snoRNA snoRNA MGP_WSBEiJ_T0001868.1 MGP_WSBEiJ_G0001788.1 mouse_genomes_project 6 1309193 1312054 - TEC TEC MGP_WSBEiJ_T0099665.1 MGP_WSBEiJ_G0038328.1 mouse_genomes_project 6 85646526 85646642 + Gm22893 snoRNA snoRNA MGP_WSBEiJ_T0002105.1 MGP_WSBEiJ_G0002024.1 mouse_genomes_project 6 130728284 130728749 + TEC TEC MGP_WSBEiJ_T0015116.1 MGP_WSBEiJ_G0013246.1 mouse_genomes_project 6 125853977 125854824 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099631.1 MGP_WSBEiJ_G0038294.1 mouse_genomes_project 6 5315789 5315910 - Gm26075 snoRNA snoRNA MGP_WSBEiJ_T0014810.1 MGP_WSBEiJ_G0012940.1 mouse_genomes_project 6 13859254 13860950 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100883.1 MGP_WSBEiJ_G0039341.1 mouse_genomes_project 6 31910509 31916735 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0078087.1 MGP_WSBEiJ_G0030298.1 mouse_genomes_project 6 114943174 114954514 + MGP_WSBEiJ_P0078087 Creld1 protein_coding protein_coding MGP_WSBEiJ_T0078088.1 MGP_WSBEiJ_G0030298.1 mouse_genomes_project 6 114943299 114949105 + Creld1 protein_coding retained_intron MGP_WSBEiJ_T0078089.1 MGP_WSBEiJ_G0030298.1 mouse_genomes_project 6 114943731 114948274 + Creld1 protein_coding retained_intron MGP_WSBEiJ_T0078090.1 MGP_WSBEiJ_G0030298.1 mouse_genomes_project 6 114947359 114949591 + Creld1 protein_coding retained_intron MGP_WSBEiJ_T0078091.1 MGP_WSBEiJ_G0030298.1 mouse_genomes_project 6 114953192 114954519 + Creld1 protein_coding retained_intron MGP_WSBEiJ_T0078092.1 MGP_WSBEiJ_G0030298.1 mouse_genomes_project 6 114953194 114954511 + Creld1 protein_coding retained_intron MGP_WSBEiJ_T0002118.1 MGP_WSBEiJ_G0002037.1 mouse_genomes_project 6 140181131 140182675 + TEC TEC MGP_WSBEiJ_T0008407.1 MGP_WSBEiJ_G0006810.1 mouse_genomes_project 6 28791771 28807949 + Gm14532 lincRNA lincRNA MGP_WSBEiJ_T0008649.1 MGP_WSBEiJ_G0006991.1 mouse_genomes_project 6 152787873 152793648 - Gm43913 lincRNA lincRNA MGP_WSBEiJ_T0076718.1 MGP_WSBEiJ_G0030029.1 mouse_genomes_project 6 71270906 71279040 - Rmnd5a protein_coding processed_transcript MGP_WSBEiJ_T0076719.1 MGP_WSBEiJ_G0030029.1 mouse_genomes_project 6 71274001 71278945 - Rmnd5a protein_coding processed_transcript MGP_WSBEiJ_T0076720.1 MGP_WSBEiJ_G0030029.1 mouse_genomes_project 6 71275861 71327168 - MGP_WSBEiJ_P0076720 Rmnd5a protein_coding protein_coding MGP_WSBEiJ_T0076721.1 MGP_WSBEiJ_G0030029.1 mouse_genomes_project 6 71277196 71279958 - Rmnd5a protein_coding retained_intron MGP_WSBEiJ_T0077462.1 MGP_WSBEiJ_G0030173.1 mouse_genomes_project 6 88690316 88691535 - MGP_WSBEiJ_P0077462 H1fx protein_coding protein_coding MGP_WSBEiJ_T0008373.1 MGP_WSBEiJ_G0006788.1 mouse_genomes_project 6 7730402 7794396 + Gm44004 lincRNA lincRNA MGP_WSBEiJ_T0075285.1 MGP_WSBEiJ_G0029671.1 mouse_genomes_project 6 21830144 21884278 - MGP_WSBEiJ_P0075285 Wasl protein_coding protein_coding MGP_WSBEiJ_T0075286.1 MGP_WSBEiJ_G0029671.1 mouse_genomes_project 6 21844733 21846144 - Wasl protein_coding retained_intron MGP_WSBEiJ_T0075287.1 MGP_WSBEiJ_G0029671.1 mouse_genomes_project 6 21850597 21884257 - MGP_WSBEiJ_P0075287 Wasl protein_coding protein_coding MGP_WSBEiJ_T0075288.1 MGP_WSBEiJ_G0029671.1 mouse_genomes_project 6 21855718 21884207 - Wasl protein_coding processed_transcript MGP_WSBEiJ_T0100285.1 MGP_WSBEiJ_G0038799.1 mouse_genomes_project 6 40900513 41095352 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0010639.1 MGP_WSBEiJ_G0008796.1 mouse_genomes_project 6 131409181 131409237 - Gm27336 miRNA miRNA MGP_WSBEiJ_T0000192.1 MGP_WSBEiJ_G0000144.1 mouse_genomes_project 6 69785849 69786411 - MGP_WSBEiJ_P0000192 Igkv7-33 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000193.1 MGP_WSBEiJ_G0000144.1 mouse_genomes_project 6 69785849 69786411 - MGP_WSBEiJ_P0000193 Igkv7-33 IG_V_gene IG_V_gene MGP_WSBEiJ_T0076732.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71494182 71539413 - MGP_WSBEiJ_P0076732 Kdm3a protein_coding protein_coding MGP_WSBEiJ_T0076733.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71494184 71539194 - MGP_WSBEiJ_P0076733 Kdm3a protein_coding protein_coding MGP_WSBEiJ_T0076734.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71494247 71539498 - MGP_WSBEiJ_P0076734 Kdm3a protein_coding protein_coding MGP_WSBEiJ_T0076735.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71495338 71497155 - Kdm3a protein_coding retained_intron MGP_WSBEiJ_T0076736.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71495767 71497794 - Kdm3a protein_coding retained_intron MGP_WSBEiJ_T0076737.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71499194 71502394 - Kdm3a protein_coding retained_intron MGP_WSBEiJ_T0076738.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71499839 71515575 - Kdm3a protein_coding processed_transcript MGP_WSBEiJ_T0076739.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71502183 71504643 - Kdm3a protein_coding retained_intron MGP_WSBEiJ_T0076740.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71504549 71539194 - MGP_WSBEiJ_P0076740 Kdm3a protein_coding protein_coding MGP_WSBEiJ_T0076741.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71504650 71506379 - Kdm3a protein_coding retained_intron MGP_WSBEiJ_T0076742.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71505946 71518465 - MGP_WSBEiJ_P0076742 Kdm3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076743.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71507964 71528158 - Kdm3a protein_coding retained_intron MGP_WSBEiJ_T0076744.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71508353 71509202 - Kdm3a protein_coding processed_transcript MGP_WSBEiJ_T0076745.1 MGP_WSBEiJ_G0030032.1 mouse_genomes_project 6 71518206 71527881 - Kdm3a protein_coding processed_transcript MGP_WSBEiJ_T0076518.1 MGP_WSBEiJ_G0029973.1 mouse_genomes_project 6 56270526 56303173 - MGP_WSBEiJ_P0076518 protein_coding unknown_likely_coding MGP_WSBEiJ_T0076519.1 MGP_WSBEiJ_G0029973.1 mouse_genomes_project 6 56277711 56279722 - MGP_WSBEiJ_P0076519 protein_coding protein_coding MGP_WSBEiJ_T0076520.1 MGP_WSBEiJ_G0029973.1 mouse_genomes_project 6 56301977 56303011 - protein_coding processed_transcript MGP_WSBEiJ_T0015077.1 MGP_WSBEiJ_G0013207.1 mouse_genomes_project 6 115545201 115545277 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100946.1 MGP_WSBEiJ_G0039403.1 mouse_genomes_project 6 135966245 135967147 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014926.1 MGP_WSBEiJ_G0013056.1 mouse_genomes_project 6 64273789 64274678 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076279.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49873773 49883455 - MGP_WSBEiJ_P0076279 Hnrnpa2b1 protein_coding protein_coding MGP_WSBEiJ_T0076280.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49873962 49883408 - MGP_WSBEiJ_P0076280 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076281.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49873965 49883406 - MGP_WSBEiJ_P0076281 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076282.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49873965 49883406 - MGP_WSBEiJ_P0076282 Hnrnpa2b1 protein_coding protein_coding MGP_WSBEiJ_T0076283.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49873986 49876026 - Hnrnpa2b1 protein_coding retained_intron MGP_WSBEiJ_T0076284.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49875601 49883387 - MGP_WSBEiJ_P0076284 Hnrnpa2b1 protein_coding protein_coding MGP_WSBEiJ_T0076285.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49875601 49883333 - MGP_WSBEiJ_P0076285 Hnrnpa2b1 protein_coding protein_coding MGP_WSBEiJ_T0076286.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49875601 49883333 - MGP_WSBEiJ_P0076286 Hnrnpa2b1 protein_coding protein_coding MGP_WSBEiJ_T0076287.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49875641 49877002 - Hnrnpa2b1 protein_coding retained_intron MGP_WSBEiJ_T0076288.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49876313 49880266 - MGP_WSBEiJ_P0076288 Hnrnpa2b1 protein_coding protein_coding MGP_WSBEiJ_T0076289.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49877473 49879802 - Hnrnpa2b1 protein_coding retained_intron MGP_WSBEiJ_T0076290.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49877843 49880232 - Hnrnpa2b1 protein_coding retained_intron MGP_WSBEiJ_T0076291.1 MGP_WSBEiJ_G0029908.1 mouse_genomes_project 6 49878649 49883445 - Hnrnpa2b1 protein_coding retained_intron MGP_WSBEiJ_T0079395.1 MGP_WSBEiJ_G0030594.1 mouse_genomes_project 6 140251139 140267139 - MGP_WSBEiJ_P0079395 Art4 protein_coding protein_coding MGP_WSBEiJ_T0076151.1 MGP_WSBEiJ_G0029876.1 mouse_genomes_project 6 46846985 46865856 + Gm44965 protein_coding processed_transcript MGP_WSBEiJ_T0076152.1 MGP_WSBEiJ_G0029876.1 mouse_genomes_project 6 46846988 46871896 + MGP_WSBEiJ_P0076152 Gm44965 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099633.1 MGP_WSBEiJ_G0038296.1 mouse_genomes_project 6 10975721 10975837 + Gm23760 snoRNA snoRNA MGP_WSBEiJ_T0004983.1 MGP_WSBEiJ_G0004248.1 mouse_genomes_project 6 114760289 114779354 - Gm15492 antisense antisense MGP_WSBEiJ_T0075471.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435589 27550113 + MGP_WSBEiJ_P0075471 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075472.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435592 27491426 + MGP_WSBEiJ_P0075472 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075473.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435603 27549835 + MGP_WSBEiJ_P0075473 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075474.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435630 27491759 + Nrf1 protein_coding retained_intron MGP_WSBEiJ_T0075475.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435632 27539577 + MGP_WSBEiJ_P0075475 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075476.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435643 27488199 + MGP_WSBEiJ_P0075476 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075477.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435646 27549158 + MGP_WSBEiJ_P0075477 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075478.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435668 27549153 + MGP_WSBEiJ_P0075478 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075479.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435673 27539914 + MGP_WSBEiJ_P0075479 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075480.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435673 27524819 + MGP_WSBEiJ_P0075480 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075481.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27435752 27481980 + MGP_WSBEiJ_P0075481 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075482.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27466952 27524499 + MGP_WSBEiJ_P0075482 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075483.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27481830 27539572 + MGP_WSBEiJ_P0075483 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075484.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27481836 27539572 + MGP_WSBEiJ_P0075484 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075485.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27481836 27524131 + MGP_WSBEiJ_P0075485 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075486.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27481836 27524131 + MGP_WSBEiJ_P0075486 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075487.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27481836 27548312 + MGP_WSBEiJ_P0075487 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0075488.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27481875 27482940 + Nrf1 protein_coding retained_intron MGP_WSBEiJ_T0075489.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27490633 27510329 + Nrf1 protein_coding processed_transcript MGP_WSBEiJ_T0075490.1 MGP_WSBEiJ_G0029707.1 mouse_genomes_project 6 27510317 27535621 + MGP_WSBEiJ_P0075490 Nrf1 protein_coding protein_coding MGP_WSBEiJ_T0076584.1 MGP_WSBEiJ_G0029996.1 mouse_genomes_project 6 59924989 60032276 - MGP_WSBEiJ_P0076584 Snca protein_coding protein_coding MGP_WSBEiJ_T0076585.1 MGP_WSBEiJ_G0029996.1 mouse_genomes_project 6 59924993 60031424 - MGP_WSBEiJ_P0076585 Snca protein_coding protein_coding MGP_WSBEiJ_T0076586.1 MGP_WSBEiJ_G0029996.1 mouse_genomes_project 6 60009255 60029976 - Snca protein_coding processed_transcript MGP_WSBEiJ_T0076587.1 MGP_WSBEiJ_G0029996.1 mouse_genomes_project 6 60016186 60031292 - Snca protein_coding retained_intron MGP_WSBEiJ_T0098437.1 MGP_WSBEiJ_G0037100.1 mouse_genomes_project 6 105183057 105183123 - Gm25656 snRNA snRNA MGP_WSBEiJ_T0008553.1 MGP_WSBEiJ_G0006918.1 mouse_genomes_project 6 102287254 102341070 + Gm43950 lincRNA lincRNA MGP_WSBEiJ_T0014808.1 MGP_WSBEiJ_G0012938.1 mouse_genomes_project 6 13159221 13159468 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008412.1 MGP_WSBEiJ_G0006813.1 mouse_genomes_project 6 29017659 29019407 + Gm6117 lincRNA lincRNA MGP_WSBEiJ_T0014961.1 MGP_WSBEiJ_G0013091.1 mouse_genomes_project 6 67701344 67701635 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075696.1 MGP_WSBEiJ_G0029741.1 mouse_genomes_project 6 32532441 32566372 - MGP_WSBEiJ_P0075696 protein_coding protein_coding MGP_WSBEiJ_T0075697.1 MGP_WSBEiJ_G0029741.1 mouse_genomes_project 6 32533098 32576773 - MGP_WSBEiJ_P0075697 protein_coding protein_coding MGP_WSBEiJ_T0075698.1 MGP_WSBEiJ_G0029741.1 mouse_genomes_project 6 32534666 32535741 - protein_coding processed_transcript MGP_WSBEiJ_T0075699.1 MGP_WSBEiJ_G0029741.1 mouse_genomes_project 6 32535599 32543060 - MGP_WSBEiJ_P0075699 protein_coding protein_coding MGP_WSBEiJ_T0075700.1 MGP_WSBEiJ_G0029741.1 mouse_genomes_project 6 32540995 32567427 - MGP_WSBEiJ_P0075700 protein_coding protein_coding MGP_WSBEiJ_T0008563.1 MGP_WSBEiJ_G0006926.1 mouse_genomes_project 6 113634917 113636734 + 1700054K19Rik lincRNA lincRNA MGP_WSBEiJ_T0000166.1 MGP_WSBEiJ_G0000126.1 mouse_genomes_project 6 68230280 68230753 + MGP_WSBEiJ_P0000166 Igkv12-98 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000167.1 MGP_WSBEiJ_G0000126.1 mouse_genomes_project 6 68230280 68230753 + MGP_WSBEiJ_P0000167 Igkv12-98 IG_V_gene IG_V_gene MGP_WSBEiJ_T0076979.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426660 83429948 + MGP_WSBEiJ_P0076979 Aup1 protein_coding protein_coding MGP_WSBEiJ_T0076980.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426785 83429826 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076981.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426853 83428525 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076982.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426868 83428495 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076983.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426870 83427309 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076984.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426870 83429818 + MGP_WSBEiJ_P0076984 Aup1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076985.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426875 83428574 + MGP_WSBEiJ_P0076985 Aup1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076986.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426877 83427655 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076987.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426887 83429822 + MGP_WSBEiJ_P0076987 Aup1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076988.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83426894 83428428 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076989.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83427530 83428257 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076990.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83427853 83428453 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076991.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83428549 83429784 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076992.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83428651 83428977 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076993.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83428987 83429533 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076994.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83428992 83429822 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076995.1 MGP_WSBEiJ_G0030081.1 mouse_genomes_project 6 83429360 83429816 + Aup1 protein_coding retained_intron MGP_WSBEiJ_T0076542.1 MGP_WSBEiJ_G0029982.1 mouse_genomes_project 6 56785652 56786598 - MGP_WSBEiJ_P0076542 Vmn1r24 protein_coding protein_coding MGP_WSBEiJ_T0010616.1 MGP_WSBEiJ_G0008773.1 mouse_genomes_project 6 100653930 100654042 - Gm22328 miRNA miRNA MGP_WSBEiJ_T0015175.1 MGP_WSBEiJ_G0013305.1 mouse_genomes_project 6 143600146 143600518 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098456.1 MGP_WSBEiJ_G0037119.1 mouse_genomes_project 6 139632237 139632427 + Gm26105 snRNA snRNA MGP_WSBEiJ_T0008440.1 MGP_WSBEiJ_G0006829.1 mouse_genomes_project 6 36260229 36262727 - Gm26699 lincRNA lincRNA MGP_WSBEiJ_T0075273.1 MGP_WSBEiJ_G0029666.1 mouse_genomes_project 6 21280149 21362887 - MGP_WSBEiJ_P0075273 Slc13a1 protein_coding protein_coding MGP_WSBEiJ_T0075274.1 MGP_WSBEiJ_G0029666.1 mouse_genomes_project 6 21280416 21301966 - Slc13a1 protein_coding processed_transcript MGP_WSBEiJ_T0075275.1 MGP_WSBEiJ_G0029666.1 mouse_genomes_project 6 21298676 21301963 - Slc13a1 protein_coding retained_intron MGP_WSBEiJ_T0075276.1 MGP_WSBEiJ_G0029666.1 mouse_genomes_project 6 21328079 21362885 - Slc13a1 protein_coding retained_intron MGP_WSBEiJ_T0100934.1 MGP_WSBEiJ_G0039391.1 mouse_genomes_project 6 131396260 131396374 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0078450.1 MGP_WSBEiJ_G0030364.1 mouse_genomes_project 6 121017394 121038098 - MGP_WSBEiJ_P0078450 Wnt5b protein_coding protein_coding MGP_WSBEiJ_T0078451.1 MGP_WSBEiJ_G0030364.1 mouse_genomes_project 6 121017403 121143549 - MGP_WSBEiJ_P0078451 Wnt5b protein_coding protein_coding MGP_WSBEiJ_T0099671.1 MGP_WSBEiJ_G0038334.1 mouse_genomes_project 6 98617782 98617912 - Gm25852 snoRNA snoRNA MGP_WSBEiJ_T0079088.1 MGP_WSBEiJ_G0030492.1 mouse_genomes_project 6 130745091 130778327 + MGP_WSBEiJ_P0079088 protein_coding protein_coding MGP_WSBEiJ_T0002613.1 MGP_WSBEiJ_G0002504.1 mouse_genomes_project 6 38920291 38920784 + MGP_WSBEiJ_P0002613 Trbv4 TR_V_gene TR_V_gene MGP_WSBEiJ_T0077941.1 MGP_WSBEiJ_G0030273.1 mouse_genomes_project 6 110220332 110264323 + MGP_WSBEiJ_P0077941 Arl8b protein_coding protein_coding MGP_WSBEiJ_T0079379.1 MGP_WSBEiJ_G0030590.1 mouse_genomes_project 6 140186366 140188203 + MGP_WSBEiJ_P0079379 H2afj protein_coding protein_coding MGP_WSBEiJ_T0079380.1 MGP_WSBEiJ_G0030590.1 mouse_genomes_project 6 140186455 140187917 + MGP_WSBEiJ_P0079380 H2afj protein_coding protein_coding MGP_WSBEiJ_T0014814.1 MGP_WSBEiJ_G0012944.1 mouse_genomes_project 6 15786623 15786887 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002049.1 MGP_WSBEiJ_G0001969.1 mouse_genomes_project 6 94173079 94175563 + TEC TEC MGP_WSBEiJ_T0015054.1 MGP_WSBEiJ_G0013184.1 mouse_genomes_project 6 105644055 105644511 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076904.1 MGP_WSBEiJ_G0030062.1 mouse_genomes_project 6 78601900 78604142 + MGP_WSBEiJ_P0076904 Reg3b protein_coding protein_coding MGP_WSBEiJ_T0076905.1 MGP_WSBEiJ_G0030062.1 mouse_genomes_project 6 78602104 78604710 + MGP_WSBEiJ_P0076905 Reg3b protein_coding protein_coding MGP_WSBEiJ_T0076906.1 MGP_WSBEiJ_G0030062.1 mouse_genomes_project 6 78602141 78604152 + MGP_WSBEiJ_P0076906 Reg3b protein_coding protein_coding MGP_WSBEiJ_T0076907.1 MGP_WSBEiJ_G0030062.1 mouse_genomes_project 6 78603774 78604662 + Reg3b protein_coding retained_intron MGP_WSBEiJ_T0075692.1 MGP_WSBEiJ_G0029740.1 mouse_genomes_project 6 32505702 32525781 + MGP_WSBEiJ_P0075692 Stra8 protein_coding protein_coding MGP_WSBEiJ_T0075693.1 MGP_WSBEiJ_G0029740.1 mouse_genomes_project 6 32506499 32525779 + MGP_WSBEiJ_P0075693 Stra8 protein_coding protein_coding MGP_WSBEiJ_T0075694.1 MGP_WSBEiJ_G0029740.1 mouse_genomes_project 6 32506543 32519586 + MGP_WSBEiJ_P0075694 Stra8 protein_coding protein_coding MGP_WSBEiJ_T0075695.1 MGP_WSBEiJ_G0029740.1 mouse_genomes_project 6 32506549 32525779 + MGP_WSBEiJ_P0075695 Stra8 protein_coding protein_coding MGP_WSBEiJ_T0000178.1 MGP_WSBEiJ_G0000134.1 mouse_genomes_project 6 68518495 68518971 - MGP_WSBEiJ_P0000178 Gm42543 IG_V_gene IG_V_gene MGP_WSBEiJ_T0076236.1 MGP_WSBEiJ_G0029898.1 mouse_genomes_project 6 47611003 47636250 + MGP_WSBEiJ_P0076236 Ccdc126 protein_coding protein_coding MGP_WSBEiJ_T0076237.1 MGP_WSBEiJ_G0029898.1 mouse_genomes_project 6 47611036 47636246 + MGP_WSBEiJ_P0076237 Ccdc126 protein_coding protein_coding MGP_WSBEiJ_T0079186.1 MGP_WSBEiJ_G0030521.1 mouse_genomes_project 6 132159025 132170135 + MGP_WSBEiJ_P0079186 Klrd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0079187.1 MGP_WSBEiJ_G0030521.1 mouse_genomes_project 6 132162495 132170135 + MGP_WSBEiJ_P0079187 Klrd1 protein_coding protein_coding MGP_WSBEiJ_T0079188.1 MGP_WSBEiJ_G0030521.1 mouse_genomes_project 6 132162523 132170436 + MGP_WSBEiJ_P0079188 Klrd1 protein_coding protein_coding MGP_WSBEiJ_T0079189.1 MGP_WSBEiJ_G0030521.1 mouse_genomes_project 6 132162538 132170279 + MGP_WSBEiJ_P0079189 Klrd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079190.1 MGP_WSBEiJ_G0030521.1 mouse_genomes_project 6 132165939 132170119 + MGP_WSBEiJ_P0079190 Klrd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079191.1 MGP_WSBEiJ_G0030521.1 mouse_genomes_project 6 132167910 132170118 + Klrd1 protein_coding retained_intron MGP_WSBEiJ_T0008378.1 MGP_WSBEiJ_G0006791.1 mouse_genomes_project 6 10254635 10257295 + 1700016P04Rik lincRNA lincRNA MGP_WSBEiJ_T0079048.1 MGP_WSBEiJ_G0030483.1 mouse_genomes_project 6 129825431 129904593 + MGP_WSBEiJ_P0079048 Cracr2a protein_coding protein_coding MGP_WSBEiJ_T0079049.1 MGP_WSBEiJ_G0030483.1 mouse_genomes_project 6 129845215 129904498 + MGP_WSBEiJ_P0079049 Cracr2a protein_coding protein_coding MGP_WSBEiJ_T0079574.1 MGP_WSBEiJ_G0030628.1 mouse_genomes_project 6 146054763 146068092 + MGP_WSBEiJ_P0079574 Golt1b protein_coding protein_coding MGP_WSBEiJ_T0079575.1 MGP_WSBEiJ_G0030628.1 mouse_genomes_project 6 146054795 146065963 + Golt1b protein_coding processed_transcript MGP_WSBEiJ_T0005023.1 MGP_WSBEiJ_G0004284.1 mouse_genomes_project 6 137544174 137642440 - Gm44293 antisense antisense MGP_WSBEiJ_T0010582.1 MGP_WSBEiJ_G0008739.1 mouse_genomes_project 6 27564817 27564892 - Mir182 miRNA miRNA MGP_WSBEiJ_T0002076.1 MGP_WSBEiJ_G0001996.1 mouse_genomes_project 6 114757247 114758297 - TEC TEC MGP_WSBEiJ_T0000149.1 MGP_WSBEiJ_G0000113.1 mouse_genomes_project 6 67331632 67332109 + MGP_WSBEiJ_P0000149 Igkv11-125 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000150.1 MGP_WSBEiJ_G0000113.1 mouse_genomes_project 6 67331632 67332109 + MGP_WSBEiJ_P0000150 Igkv11-125 IG_V_gene IG_V_gene MGP_WSBEiJ_T0075338.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 25779744 26201473 + MGP_WSBEiJ_P0075338 Snd1 protein_coding protein_coding MGP_WSBEiJ_T0075339.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 25779744 26190386 + MGP_WSBEiJ_P0075339 Snd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075340.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 25779755 26241793 + MGP_WSBEiJ_P0075340 Snd1 protein_coding protein_coding MGP_WSBEiJ_T0075341.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 25779825 25782236 + Snd1 protein_coding retained_intron MGP_WSBEiJ_T0075342.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 25779961 26106531 + MGP_WSBEiJ_P0075342 Snd1 protein_coding protein_coding MGP_WSBEiJ_T0075343.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 25865752 26030106 + Snd1 protein_coding processed_transcript MGP_WSBEiJ_T0075345.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 26009817 26011996 + Snd1 protein_coding processed_transcript MGP_WSBEiJ_T0075346.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 26010628 26030116 + Snd1 protein_coding processed_transcript MGP_WSBEiJ_T0075347.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 26070924 26187627 + Snd1 protein_coding processed_transcript MGP_WSBEiJ_T0075348.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 26084812 26192880 + Snd1 protein_coding processed_transcript MGP_WSBEiJ_T0075350.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 26163106 26192955 + Snd1 protein_coding processed_transcript MGP_WSBEiJ_T0075351.1 MGP_WSBEiJ_G0029685.1 mouse_genomes_project 6 26192689 26199169 + Snd1 protein_coding retained_intron MGP_WSBEiJ_T0078111.1 MGP_WSBEiJ_G0030303.1 mouse_genomes_project 6 115075543 115087711 + MGP_WSBEiJ_P0078111 Brk1 protein_coding protein_coding MGP_WSBEiJ_T0075006.1 MGP_WSBEiJ_G0029616.1 mouse_genomes_project 6 3772886 3838843 + MGP_WSBEiJ_P0075006 Sdhaf3 protein_coding protein_coding MGP_WSBEiJ_T0075007.1 MGP_WSBEiJ_G0029616.1 mouse_genomes_project 6 3772889 3783888 + Sdhaf3 protein_coding processed_transcript MGP_WSBEiJ_T0075992.1 MGP_WSBEiJ_G0029826.1 mouse_genomes_project 6 40357552 40358433 + MGP_WSBEiJ_P0075992 Tas2r143 protein_coding protein_coding MGP_WSBEiJ_T0004991.1 MGP_WSBEiJ_G0004256.1 mouse_genomes_project 6 117560104 117582163 + Gm20404 antisense antisense MGP_WSBEiJ_T0002059.1 MGP_WSBEiJ_G0001979.1 mouse_genomes_project 6 102043405 102045502 + TEC TEC MGP_WSBEiJ_T0005043.1 MGP_WSBEiJ_G0004301.1 mouse_genomes_project 6 148462804 148464146 + Sox5os5 antisense antisense MGP_WSBEiJ_T0079231.1 MGP_WSBEiJ_G0030535.1 mouse_genomes_project 6 134580909 134581999 - MGP_WSBEiJ_P0079231 Tas2r130 protein_coding protein_coding MGP_WSBEiJ_T0076861.1 MGP_WSBEiJ_G0030052.1 mouse_genomes_project 6 72595733 72605864 + MGP_WSBEiJ_P0076861 Retsat protein_coding protein_coding MGP_WSBEiJ_T0076862.1 MGP_WSBEiJ_G0030052.1 mouse_genomes_project 6 72595886 72604820 + MGP_WSBEiJ_P0076862 Retsat protein_coding protein_coding MGP_WSBEiJ_T0076863.1 MGP_WSBEiJ_G0030052.1 mouse_genomes_project 6 72595886 72604820 + MGP_WSBEiJ_P0076863 Retsat protein_coding protein_coding MGP_WSBEiJ_T0076864.1 MGP_WSBEiJ_G0030052.1 mouse_genomes_project 6 72601634 72603828 + Retsat protein_coding processed_transcript MGP_WSBEiJ_T0076865.1 MGP_WSBEiJ_G0030052.1 mouse_genomes_project 6 72603410 72604881 + MGP_WSBEiJ_P0076865 Retsat protein_coding protein_coding MGP_WSBEiJ_T0076866.1 MGP_WSBEiJ_G0030052.1 mouse_genomes_project 6 72604083 72604650 + MGP_WSBEiJ_P0076866 Retsat protein_coding protein_coding MGP_WSBEiJ_T0008441.1 MGP_WSBEiJ_G0006830.1 mouse_genomes_project 6 36989098 36991533 + Gm43479 lincRNA lincRNA MGP_WSBEiJ_T0014949.1 MGP_WSBEiJ_G0013079.1 mouse_genomes_project 6 66556408 66556873 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077738.1 MGP_WSBEiJ_G0030233.1 mouse_genomes_project 6 93786165 93801243 + MGP_WSBEiJ_P0077738 Gm15737 protein_coding protein_coding MGP_WSBEiJ_T0014987.1 MGP_WSBEiJ_G0013117.1 mouse_genomes_project 6 78712322 78713294 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015048.1 MGP_WSBEiJ_G0013178.1 mouse_genomes_project 6 102930854 102931308 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099630.1 MGP_WSBEiJ_G0038293.1 mouse_genomes_project 6 4667462 4667591 + Gm22276 snoRNA snoRNA MGP_WSBEiJ_T0001974.1 MGP_WSBEiJ_G0001894.1 mouse_genomes_project 6 72757251 72760047 - TEC TEC MGP_WSBEiJ_T0079001.1 MGP_WSBEiJ_G0030473.1 mouse_genomes_project 6 129052387 129081443 - MGP_WSBEiJ_P0079001 Ndufa9 protein_coding protein_coding MGP_WSBEiJ_T0079002.1 MGP_WSBEiJ_G0030473.1 mouse_genomes_project 6 129052662 129081443 - MGP_WSBEiJ_P0079002 Ndufa9 protein_coding protein_coding MGP_WSBEiJ_T0079003.1 MGP_WSBEiJ_G0030473.1 mouse_genomes_project 6 129076053 129081454 - Ndufa9 protein_coding retained_intron MGP_WSBEiJ_T0077856.1 MGP_WSBEiJ_G0030255.1 mouse_genomes_project 6 100893446 100909322 - MGP_WSBEiJ_P0077856 Prok2 protein_coding protein_coding MGP_WSBEiJ_T0077857.1 MGP_WSBEiJ_G0030255.1 mouse_genomes_project 6 100893497 100909283 - MGP_WSBEiJ_P0077857 Prok2 protein_coding protein_coding MGP_WSBEiJ_T0077858.1 MGP_WSBEiJ_G0030255.1 mouse_genomes_project 6 100894166 100909313 - MGP_WSBEiJ_P0077858 Prok2 protein_coding protein_coding MGP_WSBEiJ_T0077859.1 MGP_WSBEiJ_G0030255.1 mouse_genomes_project 6 100905034 100909322 - MGP_WSBEiJ_P0077859 Prok2 protein_coding protein_coding MGP_WSBEiJ_T0005024.1 MGP_WSBEiJ_G0004285.1 mouse_genomes_project 6 138006456 138007407 + Gm44025 antisense antisense MGP_WSBEiJ_T0015012.1 MGP_WSBEiJ_G0013142.1 mouse_genomes_project 6 86969022 86969222 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000175.1 MGP_WSBEiJ_G0000132.1 mouse_genomes_project 6 68479509 68479980 - MGP_WSBEiJ_P0000175 Igkv12-89 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000176.1 MGP_WSBEiJ_G0000132.1 mouse_genomes_project 6 68479509 68479980 - MGP_WSBEiJ_P0000176 Igkv12-89 IG_V_gene IG_V_gene MGP_WSBEiJ_T0099637.1 MGP_WSBEiJ_G0038300.1 mouse_genomes_project 6 22417655 22417778 - Gm22529 snoRNA snoRNA MGP_WSBEiJ_T0079841.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153028389 153032819 + MGP_WSBEiJ_P0079841 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079842.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153030071 153040375 + MGP_WSBEiJ_P0079842 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079843.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153030071 153040370 + MGP_WSBEiJ_P0079843 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079844.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153030074 153033665 + MGP_WSBEiJ_P0079844 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079845.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153030112 153033665 + MGP_WSBEiJ_P0079845 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079846.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153030122 153039602 + MGP_WSBEiJ_P0079846 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079847.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153030132 153040375 + MGP_WSBEiJ_P0079847 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079848.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153030196 153039617 + MGP_WSBEiJ_P0079848 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079849.1 MGP_WSBEiJ_G0030675.1 mouse_genomes_project 6 153030204 153040375 + MGP_WSBEiJ_P0079849 Mettl20 protein_coding protein_coding MGP_WSBEiJ_T0079250.1 MGP_WSBEiJ_G0030552.1 mouse_genomes_project 6 135947791 135948949 + MGP_WSBEiJ_P0079250 Tas2r117 protein_coding protein_coding MGP_WSBEiJ_T0010573.1 MGP_WSBEiJ_G0008730.1 mouse_genomes_project 6 1825527 1825632 - Gm44333 miRNA miRNA MGP_WSBEiJ_T0100921.1 MGP_WSBEiJ_G0039379.1 mouse_genomes_project 6 86987964 86989098 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010633.1 MGP_WSBEiJ_G0008790.1 mouse_genomes_project 6 126816848 126816917 - Mir200c miRNA miRNA MGP_WSBEiJ_T0002007.1 MGP_WSBEiJ_G0001927.1 mouse_genomes_project 6 87142354 87144103 + TEC TEC MGP_WSBEiJ_T0008388.1 MGP_WSBEiJ_G0006798.1 mouse_genomes_project 6 18953372 18958590 - Gm3289 lincRNA lincRNA MGP_WSBEiJ_T0076964.1 MGP_WSBEiJ_G0030079.1 mouse_genomes_project 6 83406358 83409742 + Loxl3 protein_coding processed_transcript MGP_WSBEiJ_T0076965.1 MGP_WSBEiJ_G0030079.1 mouse_genomes_project 6 83406358 83424702 + MGP_WSBEiJ_P0076965 Loxl3 protein_coding protein_coding MGP_WSBEiJ_T0076966.1 MGP_WSBEiJ_G0030079.1 mouse_genomes_project 6 83406358 83424702 + MGP_WSBEiJ_P0076966 Loxl3 protein_coding protein_coding MGP_WSBEiJ_T0076967.1 MGP_WSBEiJ_G0030079.1 mouse_genomes_project 6 83410585 83417318 + Loxl3 protein_coding processed_transcript MGP_WSBEiJ_T0076968.1 MGP_WSBEiJ_G0030079.1 mouse_genomes_project 6 83421993 83422793 + Loxl3 protein_coding retained_intron MGP_WSBEiJ_T0015033.1 MGP_WSBEiJ_G0013163.1 mouse_genomes_project 6 97052534 97052901 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100926.1 MGP_WSBEiJ_G0039384.1 mouse_genomes_project 6 90817291 90817529 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0076212.1 MGP_WSBEiJ_G0029892.1 mouse_genomes_project 6 47247739 47252187 + MGP_WSBEiJ_P0076212 protein_coding protein_coding MGP_WSBEiJ_T0076213.1 MGP_WSBEiJ_G0029892.1 mouse_genomes_project 6 47247850 47252188 + MGP_WSBEiJ_P0076213 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076214.1 MGP_WSBEiJ_G0029892.1 mouse_genomes_project 6 47250675 47252185 + protein_coding retained_intron MGP_WSBEiJ_T0100915.1 MGP_WSBEiJ_G0039373.1 mouse_genomes_project 6 62197742 62198073 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008625.1 MGP_WSBEiJ_G0006975.1 mouse_genomes_project 6 146931658 146988212 + D6Ertd474e lincRNA lincRNA MGP_WSBEiJ_T0008626.1 MGP_WSBEiJ_G0006975.1 mouse_genomes_project 6 146931658 146935761 + D6Ertd474e lincRNA lincRNA MGP_WSBEiJ_T0008627.1 MGP_WSBEiJ_G0006975.1 mouse_genomes_project 6 146931663 146988555 + D6Ertd474e lincRNA lincRNA MGP_WSBEiJ_T0008628.1 MGP_WSBEiJ_G0006975.1 mouse_genomes_project 6 146931663 146989762 + D6Ertd474e lincRNA lincRNA MGP_WSBEiJ_T0008629.1 MGP_WSBEiJ_G0006975.1 mouse_genomes_project 6 146978683 146988519 + D6Ertd474e lincRNA lincRNA MGP_WSBEiJ_T0099638.1 MGP_WSBEiJ_G0038301.1 mouse_genomes_project 6 24926011 24926128 + Gm26310 snoRNA snoRNA MGP_WSBEiJ_T0075289.1 MGP_WSBEiJ_G0029672.1 mouse_genomes_project 6 21949371 21962228 + MGP_WSBEiJ_P0075289 Hyal6 protein_coding protein_coding MGP_WSBEiJ_T0076528.1 MGP_WSBEiJ_G0029976.1 mouse_genomes_project 6 56470364 56511050 + MGP_WSBEiJ_P0076528 Lancl2 protein_coding protein_coding MGP_WSBEiJ_T0076529.1 MGP_WSBEiJ_G0029976.1 mouse_genomes_project 6 56470460 56510093 + MGP_WSBEiJ_P0076529 Lancl2 protein_coding protein_coding MGP_WSBEiJ_T0076530.1 MGP_WSBEiJ_G0029976.1 mouse_genomes_project 6 56470911 56511049 + MGP_WSBEiJ_P0076530 Lancl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076179.1 MGP_WSBEiJ_G0029885.1 mouse_genomes_project 6 46998252 47002985 + MGP_WSBEiJ_P0076179 Gimap1 protein_coding protein_coding MGP_WSBEiJ_T0076181.1 MGP_WSBEiJ_G0029885.1 mouse_genomes_project 6 46998271 47001918 + MGP_WSBEiJ_P0076181 Gimap1 protein_coding protein_coding MGP_WSBEiJ_T0076182.1 MGP_WSBEiJ_G0029885.1 mouse_genomes_project 6 46998274 47002989 + MGP_WSBEiJ_P0076182 Gimap1 protein_coding protein_coding MGP_WSBEiJ_T0076183.1 MGP_WSBEiJ_G0029885.1 mouse_genomes_project 6 46998285 46999229 + Gimap1 protein_coding retained_intron MGP_WSBEiJ_T0076184.1 MGP_WSBEiJ_G0029885.1 mouse_genomes_project 6 46998305 47000991 + Gimap1 protein_coding retained_intron MGP_WSBEiJ_T0076185.1 MGP_WSBEiJ_G0029885.1 mouse_genomes_project 6 47001376 47002990 + Gimap1 protein_coding retained_intron MGP_WSBEiJ_T0001876.1 MGP_WSBEiJ_G0001796.1 mouse_genomes_project 6 3665909 3667896 - TEC TEC MGP_WSBEiJ_T0014885.1 MGP_WSBEiJ_G0013015.1 mouse_genomes_project 6 47728302 47729126 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079160.1 MGP_WSBEiJ_G0030513.1 mouse_genomes_project 6 131934206 131945329 - MGP_WSBEiJ_P0079160 Clec12b protein_coding protein_coding MGP_WSBEiJ_T0079161.1 MGP_WSBEiJ_G0030513.1 mouse_genomes_project 6 131934478 131945700 - MGP_WSBEiJ_P0079161 Clec12b protein_coding protein_coding MGP_WSBEiJ_T0075897.1 MGP_WSBEiJ_G0029790.1 mouse_genomes_project 6 38471946 38505018 + MGP_WSBEiJ_P0075897 Mgam protein_coding protein_coding MGP_WSBEiJ_T0075898.1 MGP_WSBEiJ_G0029790.1 mouse_genomes_project 6 38489244 38567709 + MGP_WSBEiJ_P0075898 Mgam protein_coding unknown_likely_coding MGP_WSBEiJ_T0075899.1 MGP_WSBEiJ_G0029790.1 mouse_genomes_project 6 38544526 38624917 + MGP_WSBEiJ_P0075899 Mgam protein_coding protein_coding MGP_WSBEiJ_T0075900.1 MGP_WSBEiJ_G0029790.1 mouse_genomes_project 6 38571128 38625588 + MGP_WSBEiJ_P0075900 Mgam protein_coding unknown_likely_coding MGP_WSBEiJ_T0075901.1 MGP_WSBEiJ_G0029790.1 mouse_genomes_project 6 38603979 38625576 + Mgam protein_coding processed_transcript MGP_WSBEiJ_T0075902.1 MGP_WSBEiJ_G0029790.1 mouse_genomes_project 6 38604431 38605533 + Mgam protein_coding processed_transcript MGP_WSBEiJ_T0002113.1 MGP_WSBEiJ_G0002032.1 mouse_genomes_project 6 137312382 137315257 + TEC TEC MGP_WSBEiJ_T0015032.1 MGP_WSBEiJ_G0013162.1 mouse_genomes_project 6 96957636 96958825 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002067.1 MGP_WSBEiJ_G0001987.1 mouse_genomes_project 6 104873852 104877453 + TEC TEC MGP_WSBEiJ_T0004890.1 MGP_WSBEiJ_G0004193.1 mouse_genomes_project 6 65056588 65069241 - Gm16838 antisense antisense MGP_WSBEiJ_T0076292.1 MGP_WSBEiJ_G0029909.1 mouse_genomes_project 6 49884223 49889863 + Cbx3 protein_coding retained_intron MGP_WSBEiJ_T0076293.1 MGP_WSBEiJ_G0029909.1 mouse_genomes_project 6 49884237 49885625 + Cbx3 protein_coding retained_intron MGP_WSBEiJ_T0076294.1 MGP_WSBEiJ_G0029909.1 mouse_genomes_project 6 49884306 49905069 + MGP_WSBEiJ_P0076294 Cbx3 protein_coding protein_coding MGP_WSBEiJ_T0076295.1 MGP_WSBEiJ_G0029909.1 mouse_genomes_project 6 49884765 49909107 + MGP_WSBEiJ_P0076295 Cbx3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0076296.1 MGP_WSBEiJ_G0029909.1 mouse_genomes_project 6 49903926 49906852 + Cbx3 protein_coding retained_intron MGP_WSBEiJ_T0076106.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46636855 46660537 + MGP_WSBEiJ_P0076106 Krba1 protein_coding protein_coding MGP_WSBEiJ_T0076107.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46636883 46657882 + MGP_WSBEiJ_P0076107 Krba1 protein_coding protein_coding MGP_WSBEiJ_T0076108.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46636899 46641954 + Krba1 protein_coding retained_intron MGP_WSBEiJ_T0076109.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46636901 46657877 + MGP_WSBEiJ_P0076109 Krba1 protein_coding protein_coding MGP_WSBEiJ_T0076110.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46636927 46660537 + MGP_WSBEiJ_P0076110 Krba1 protein_coding protein_coding MGP_WSBEiJ_T0076111.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46636967 46644738 + Krba1 protein_coding processed_transcript MGP_WSBEiJ_T0076112.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46637135 46658452 + MGP_WSBEiJ_P0076112 Krba1 protein_coding protein_coding MGP_WSBEiJ_T0076113.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46645313 46649531 + Krba1 protein_coding processed_transcript MGP_WSBEiJ_T0076114.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46650192 46660537 + Krba1 protein_coding retained_intron MGP_WSBEiJ_T0076115.1 MGP_WSBEiJ_G0029867.1 mouse_genomes_project 6 46654318 46660773 + Krba1 protein_coding retained_intron MGP_WSBEiJ_T0015162.1 MGP_WSBEiJ_G0013292.1 mouse_genomes_project 6 136134982 136135411 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076211.1 MGP_WSBEiJ_G0029891.1 mouse_genomes_project 6 47197033 47200823 + MGP_WSBEiJ_P0076211 1600015I10Rik protein_coding protein_coding MGP_WSBEiJ_T0014875.1 MGP_WSBEiJ_G0013005.1 mouse_genomes_project 6 47208224 47208553 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079739.1 MGP_WSBEiJ_G0030656.1 mouse_genomes_project 6 150512074 150568209 + MGP_WSBEiJ_P0079739 Stk38l protein_coding protein_coding MGP_WSBEiJ_T0079740.1 MGP_WSBEiJ_G0030656.1 mouse_genomes_project 6 150512391 150547685 + MGP_WSBEiJ_P0079740 Stk38l protein_coding protein_coding MGP_WSBEiJ_T0001873.1 MGP_WSBEiJ_G0001793.1 mouse_genomes_project 6 1710574 1710894 + TEC TEC MGP_WSBEiJ_T0015017.1 MGP_WSBEiJ_G0013147.1 mouse_genomes_project 6 92448972 92449367 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075290.1 MGP_WSBEiJ_G0029673.1 mouse_genomes_project 6 21965103 21985846 + MGP_WSBEiJ_P0075290 Hyal4 protein_coding protein_coding MGP_WSBEiJ_T0011455.1 MGP_WSBEiJ_G0009612.1 mouse_genomes_project 6 83988679 83989002 - Gm24990 misc_RNA misc_RNA MGP_WSBEiJ_T0000297.1 MGP_WSBEiJ_G0000245.1 mouse_genomes_project 6 69858213 69858782 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0014917.1 MGP_WSBEiJ_G0013047.1 mouse_genomes_project 6 60619336 60619760 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078805.1 MGP_WSBEiJ_G0030436.1 mouse_genomes_project 6 126913910 126917598 - MGP_WSBEiJ_P0078805 Tpi1 protein_coding protein_coding MGP_WSBEiJ_T0078806.1 MGP_WSBEiJ_G0030436.1 mouse_genomes_project 6 126914597 126915212 - Tpi1 protein_coding retained_intron MGP_WSBEiJ_T0078807.1 MGP_WSBEiJ_G0030436.1 mouse_genomes_project 6 126915774 126916166 - Tpi1 protein_coding retained_intron MGP_WSBEiJ_T0078808.1 MGP_WSBEiJ_G0030436.1 mouse_genomes_project 6 126915860 126917484 - Tpi1 protein_coding retained_intron MGP_WSBEiJ_T0078809.1 MGP_WSBEiJ_G0030436.1 mouse_genomes_project 6 126916789 126917480 - Tpi1 protein_coding retained_intron MGP_WSBEiJ_T0075927.1 MGP_WSBEiJ_G0029808.1 mouse_genomes_project 6 39549480 39578775 - MGP_WSBEiJ_P0075927 Trpv5 protein_coding protein_coding MGP_WSBEiJ_T0075928.1 MGP_WSBEiJ_G0029808.1 mouse_genomes_project 6 39550437 39602106 - MGP_WSBEiJ_P0075928 Trpv5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0075929.1 MGP_WSBEiJ_G0029808.1 mouse_genomes_project 6 39550437 39578661 - MGP_WSBEiJ_P0075929 Trpv5 protein_coding protein_coding MGP_WSBEiJ_T0002045.1 MGP_WSBEiJ_G0001965.1 mouse_genomes_project 6 92814724 92815975 - TEC TEC MGP_WSBEiJ_T0004856.1 MGP_WSBEiJ_G0004168.1 mouse_genomes_project 6 37201458 37202474 + Gm10244 antisense antisense MGP_WSBEiJ_T0004857.1 MGP_WSBEiJ_G0004168.1 mouse_genomes_project 6 37201949 37202866 + Gm10244 antisense antisense MGP_WSBEiJ_T0002525.1 MGP_WSBEiJ_G0002433.1 mouse_genomes_project 6 39432436 39432485 + MGP_WSBEiJ_P0002525 Trbj2-5 TR_J_gene TR_J_gene MGP_WSBEiJ_T0079317.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289887 138304980 + MGP_WSBEiJ_P0079317 Ddx47 protein_coding protein_coding MGP_WSBEiJ_T0079318.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289897 138298798 + MGP_WSBEiJ_P0079318 Ddx47 protein_coding protein_coding MGP_WSBEiJ_T0079319.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289899 138298762 + MGP_WSBEiJ_P0079319 Ddx47 protein_coding protein_coding MGP_WSBEiJ_T0079320.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289901 138296390 + Ddx47 protein_coding retained_intron MGP_WSBEiJ_T0079321.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289907 138304976 + Ddx47 protein_coding retained_intron MGP_WSBEiJ_T0079322.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289908 138297877 + MGP_WSBEiJ_P0079322 Ddx47 protein_coding protein_coding MGP_WSBEiJ_T0079323.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289910 138295387 + Ddx47 protein_coding retained_intron MGP_WSBEiJ_T0079324.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289919 138301327 + MGP_WSBEiJ_P0079324 Ddx47 protein_coding protein_coding MGP_WSBEiJ_T0079325.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138289928 138301350 + MGP_WSBEiJ_P0079325 Ddx47 protein_coding protein_coding MGP_WSBEiJ_T0079326.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138295111 138298827 + Ddx47 protein_coding processed_transcript MGP_WSBEiJ_T0079327.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138295582 138298295 + Ddx47 protein_coding retained_intron MGP_WSBEiJ_T0079328.1 MGP_WSBEiJ_G0030576.1 mouse_genomes_project 6 138298760 138304976 + MGP_WSBEiJ_P0079328 Ddx47 protein_coding protein_coding MGP_WSBEiJ_T0000170.1 MGP_WSBEiJ_G0000128.1 mouse_genomes_project 6 68243276 68243759 - MGP_WSBEiJ_P0000170 IG_V_gene IG_V_gene MGP_WSBEiJ_T0002536.1 MGP_WSBEiJ_G0002444.1 mouse_genomes_project 6 39432581 39432629 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0079527.1 MGP_WSBEiJ_G0030617.1 mouse_genomes_project 6 145183733 145233013 + MGP_WSBEiJ_P0079527 Slco1c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079528.1 MGP_WSBEiJ_G0030617.1 mouse_genomes_project 6 145183751 145233029 + MGP_WSBEiJ_P0079528 Slco1c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079529.1 MGP_WSBEiJ_G0030617.1 mouse_genomes_project 6 145183758 145232837 + MGP_WSBEiJ_P0079529 Slco1c1 protein_coding protein_coding MGP_WSBEiJ_T0079530.1 MGP_WSBEiJ_G0030617.1 mouse_genomes_project 6 145183900 145233430 + MGP_WSBEiJ_P0079530 Slco1c1 protein_coding protein_coding MGP_WSBEiJ_T0079531.1 MGP_WSBEiJ_G0030617.1 mouse_genomes_project 6 145207861 145209967 + Slco1c1 protein_coding retained_intron MGP_WSBEiJ_T0002673.1 MGP_WSBEiJ_G0002557.1 mouse_genomes_project 6 39042339 39042633 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0098419.1 MGP_WSBEiJ_G0037082.1 mouse_genomes_project 6 62466862 62466968 - Gm22212 snRNA snRNA MGP_WSBEiJ_T0077380.1 MGP_WSBEiJ_G0030155.1 mouse_genomes_project 6 87729418 87785209 + MGP_WSBEiJ_P0077380 Gfpt1 protein_coding protein_coding MGP_WSBEiJ_T0077381.1 MGP_WSBEiJ_G0030155.1 mouse_genomes_project 6 87729418 87746954 + MGP_WSBEiJ_P0077381 Gfpt1 protein_coding protein_coding MGP_WSBEiJ_T0077382.1 MGP_WSBEiJ_G0030155.1 mouse_genomes_project 6 87729422 87745512 + Gfpt1 protein_coding processed_transcript MGP_WSBEiJ_T0077383.1 MGP_WSBEiJ_G0030155.1 mouse_genomes_project 6 87729422 87732362 + Gfpt1 protein_coding retained_intron MGP_WSBEiJ_T0077384.1 MGP_WSBEiJ_G0030155.1 mouse_genomes_project 6 87729422 87746954 + MGP_WSBEiJ_P0077384 Gfpt1 protein_coding protein_coding MGP_WSBEiJ_T0077385.1 MGP_WSBEiJ_G0030155.1 mouse_genomes_project 6 87729463 87781255 + MGP_WSBEiJ_P0077385 Gfpt1 protein_coding protein_coding MGP_WSBEiJ_T0077386.1 MGP_WSBEiJ_G0030155.1 mouse_genomes_project 6 87769817 87779381 + Gfpt1 protein_coding retained_intron MGP_WSBEiJ_T0078353.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353785 119357346 + Zfp637 protein_coding retained_intron MGP_WSBEiJ_T0078354.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353785 119357918 + MGP_WSBEiJ_P0078354 Zfp637 protein_coding protein_coding MGP_WSBEiJ_T0078355.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353786 119358225 + MGP_WSBEiJ_P0078355 Zfp637 protein_coding protein_coding MGP_WSBEiJ_T0078356.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353847 119358661 + MGP_WSBEiJ_P0078356 Zfp637 protein_coding protein_coding MGP_WSBEiJ_T0078357.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353851 119358662 + MGP_WSBEiJ_P0078357 Zfp637 protein_coding protein_coding MGP_WSBEiJ_T0078358.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353873 119358119 + MGP_WSBEiJ_P0078358 Zfp637 protein_coding protein_coding MGP_WSBEiJ_T0078359.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353873 119358119 + MGP_WSBEiJ_P0078359 Zfp637 protein_coding protein_coding MGP_WSBEiJ_T0078360.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353886 119358662 + MGP_WSBEiJ_P0078360 Zfp637 protein_coding protein_coding MGP_WSBEiJ_T0078361.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119353886 119358119 + MGP_WSBEiJ_P0078361 Zfp637 protein_coding protein_coding MGP_WSBEiJ_T0078362.1 MGP_WSBEiJ_G0030348.1 mouse_genomes_project 6 119356080 119358281 + Zfp637 protein_coding retained_intron MGP_WSBEiJ_T0097454.1 MGP_WSBEiJ_G0036124.1 mouse_genomes_project 6 148401310 148403604 - Sox5it sense_intronic sense_intronic MGP_WSBEiJ_T0008647.1 MGP_WSBEiJ_G0006989.1 mouse_genomes_project 6 152520974 152539363 - 4930528G23Rik lincRNA lincRNA MGP_WSBEiJ_T0100891.1 MGP_WSBEiJ_G0039349.1 mouse_genomes_project 6 40404060 40404202 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008503.1 MGP_WSBEiJ_G0006882.1 mouse_genomes_project 6 82227187 82236074 - 1700009C05Rik lincRNA lincRNA MGP_WSBEiJ_T0076186.1 MGP_WSBEiJ_G0029886.1 mouse_genomes_project 6 47005390 47014506 + MGP_WSBEiJ_P0076186 Gimap5 protein_coding protein_coding MGP_WSBEiJ_T0076187.1 MGP_WSBEiJ_G0029886.1 mouse_genomes_project 6 47005391 47006686 + Gimap5 protein_coding processed_transcript MGP_WSBEiJ_T0076188.1 MGP_WSBEiJ_G0029886.1 mouse_genomes_project 6 47005392 47006713 + Gimap5 protein_coding processed_transcript MGP_WSBEiJ_T0076189.1 MGP_WSBEiJ_G0029886.1 mouse_genomes_project 6 47005492 47007827 + Gimap5 protein_coding retained_intron MGP_WSBEiJ_T0001957.1 MGP_WSBEiJ_G0001877.1 mouse_genomes_project 6 59991366 59995394 - TEC TEC MGP_WSBEiJ_T0100939.1 MGP_WSBEiJ_G0039396.1 mouse_genomes_project 6 133228593 133322707 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098455.1 MGP_WSBEiJ_G0037118.1 mouse_genomes_project 6 132856580 132856654 + Gm24712 snRNA snRNA MGP_WSBEiJ_T0075228.1 MGP_WSBEiJ_G0029656.1 mouse_genomes_project 6 19092356 19389046 + MGP_WSBEiJ_P0075228 Cped1 protein_coding protein_coding MGP_WSBEiJ_T0075229.1 MGP_WSBEiJ_G0029656.1 mouse_genomes_project 6 19092384 19116965 + Cped1 protein_coding processed_transcript MGP_WSBEiJ_T0075230.1 MGP_WSBEiJ_G0029656.1 mouse_genomes_project 6 19092384 19245937 + MGP_WSBEiJ_P0075230 Cped1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075231.1 MGP_WSBEiJ_G0029656.1 mouse_genomes_project 6 19093034 19244964 + MGP_WSBEiJ_P0075231 Cped1 protein_coding protein_coding MGP_WSBEiJ_T0075232.1 MGP_WSBEiJ_G0029656.1 mouse_genomes_project 6 19093330 19181444 + Cped1 protein_coding processed_transcript MGP_WSBEiJ_T0075233.1 MGP_WSBEiJ_G0029656.1 mouse_genomes_project 6 19124331 19372546 + MGP_WSBEiJ_P0075233 Cped1 protein_coding protein_coding MGP_WSBEiJ_T0075234.1 MGP_WSBEiJ_G0029656.1 mouse_genomes_project 6 19134098 19202548 + Cped1 protein_coding processed_transcript MGP_WSBEiJ_T0075235.1 MGP_WSBEiJ_G0029656.1 mouse_genomes_project 6 19252422 19273887 + Cped1 protein_coding retained_intron MGP_WSBEiJ_T0010584.1 MGP_WSBEiJ_G0008741.1 mouse_genomes_project 6 27568545 27568615 - Mir183 miRNA miRNA MGP_WSBEiJ_T0001997.1 MGP_WSBEiJ_G0001917.1 mouse_genomes_project 6 82645033 82653874 - TEC TEC MGP_WSBEiJ_T0004922.1 MGP_WSBEiJ_G0004212.1 mouse_genomes_project 6 84432449 84435677 - Gm43918 antisense antisense MGP_WSBEiJ_T0099676.1 MGP_WSBEiJ_G0038339.1 mouse_genomes_project 6 117252515 117252655 - Snora7a snoRNA snoRNA MGP_WSBEiJ_T0076891.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 77049017 78196641 - MGP_WSBEiJ_P0076891 Ctnna2 protein_coding protein_coding MGP_WSBEiJ_T0076892.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 77049017 78196641 - MGP_WSBEiJ_P0076892 Ctnna2 protein_coding protein_coding MGP_WSBEiJ_T0076893.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 77049020 78196492 - MGP_WSBEiJ_P0076893 Ctnna2 protein_coding protein_coding MGP_WSBEiJ_T0076894.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 77049930 78196502 - MGP_WSBEiJ_P0076894 Ctnna2 protein_coding protein_coding MGP_WSBEiJ_T0076895.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 77050136 77074623 - Ctnna2 protein_coding retained_intron MGP_WSBEiJ_T0076896.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 77088061 77323949 - MGP_WSBEiJ_P0076896 Ctnna2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076901.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 77804537 78196502 - MGP_WSBEiJ_P0076901 Ctnna2 protein_coding protein_coding MGP_WSBEiJ_T0076902.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 77810133 78122278 - MGP_WSBEiJ_P0076902 Ctnna2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0076903.1 MGP_WSBEiJ_G0030060.1 mouse_genomes_project 6 78135491 78196527 - Ctnna2 protein_coding processed_transcript MGP_WSBEiJ_T0076509.1 MGP_WSBEiJ_G0029964.1 mouse_genomes_project 6 55881670 55882697 + MGP_WSBEiJ_P0076509 Vmn1r11 protein_coding protein_coding MGP_WSBEiJ_T0002134.1 MGP_WSBEiJ_G0002053.1 mouse_genomes_project 6 149073693 149074601 + TEC TEC MGP_WSBEiJ_T0008422.1 MGP_WSBEiJ_G0006821.1 mouse_genomes_project 6 31503133 31511719 - Gm13853 lincRNA lincRNA MGP_WSBEiJ_T0014829.1 MGP_WSBEiJ_G0012959.1 mouse_genomes_project 6 23207074 23207409 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079133.1 MGP_WSBEiJ_G0030504.1 mouse_genomes_project 6 131363293 131369504 - MGP_WSBEiJ_P0079133 BC035044 protein_coding protein_coding MGP_WSBEiJ_T0002669.1 MGP_WSBEiJ_G0002553.1 mouse_genomes_project 6 38950757 38951047 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0075678.1 MGP_WSBEiJ_G0029738.1 mouse_genomes_project 6 32441508 32447758 - MGP_WSBEiJ_P0075678 3110062M04Rik protein_coding protein_coding MGP_WSBEiJ_T0075679.1 MGP_WSBEiJ_G0029738.1 mouse_genomes_project 6 32441577 32447797 - MGP_WSBEiJ_P0075679 3110062M04Rik protein_coding protein_coding MGP_WSBEiJ_T0075681.1 MGP_WSBEiJ_G0029738.1 mouse_genomes_project 6 32443432 32447746 - MGP_WSBEiJ_P0075681 3110062M04Rik protein_coding protein_coding MGP_WSBEiJ_T0075682.1 MGP_WSBEiJ_G0029738.1 mouse_genomes_project 6 32444380 32446866 - MGP_WSBEiJ_P0075682 3110062M04Rik protein_coding protein_coding MGP_WSBEiJ_T0075683.1 MGP_WSBEiJ_G0029738.1 mouse_genomes_project 6 32445080 32446717 - 3110062M04Rik protein_coding retained_intron MGP_WSBEiJ_T0078707.1 MGP_WSBEiJ_G0030415.1 mouse_genomes_project 6 125629681 125675634 + MGP_WSBEiJ_P0078707 Vmn2r23 protein_coding protein_coding MGP_WSBEiJ_T0076662.1 MGP_WSBEiJ_G0030014.1 mouse_genomes_project 6 66360927 66363238 - MGP_WSBEiJ_P0076662 Gadd45a protein_coding protein_coding MGP_WSBEiJ_T0076663.1 MGP_WSBEiJ_G0030014.1 mouse_genomes_project 6 66361290 66363033 - Gadd45a protein_coding retained_intron MGP_WSBEiJ_T0076664.1 MGP_WSBEiJ_G0030014.1 mouse_genomes_project 6 66361290 66363196 - MGP_WSBEiJ_P0076664 Gadd45a protein_coding protein_coding MGP_WSBEiJ_T0076665.1 MGP_WSBEiJ_G0030014.1 mouse_genomes_project 6 66361297 66363083 - MGP_WSBEiJ_P0076665 Gadd45a protein_coding protein_coding MGP_WSBEiJ_T0076666.1 MGP_WSBEiJ_G0030014.1 mouse_genomes_project 6 66361410 66363018 - Gadd45a protein_coding retained_intron MGP_WSBEiJ_T0076667.1 MGP_WSBEiJ_G0030014.1 mouse_genomes_project 6 66362202 66363209 - Gadd45a protein_coding retained_intron MGP_WSBEiJ_T0076668.1 MGP_WSBEiJ_G0030014.1 mouse_genomes_project 6 66362728 66363289 - Gadd45a protein_coding retained_intron MGP_WSBEiJ_T0076802.1 MGP_WSBEiJ_G0030043.1 mouse_genomes_project 6 72315298 72319418 + MGP_WSBEiJ_P0076802 Tmem150a protein_coding protein_coding MGP_WSBEiJ_T0076803.1 MGP_WSBEiJ_G0030043.1 mouse_genomes_project 6 72315329 72320264 + MGP_WSBEiJ_P0076803 Tmem150a protein_coding protein_coding MGP_WSBEiJ_T0076804.1 MGP_WSBEiJ_G0030043.1 mouse_genomes_project 6 72317139 72320318 + Tmem150a protein_coding processed_transcript MGP_WSBEiJ_T0076805.1 MGP_WSBEiJ_G0030043.1 mouse_genomes_project 6 72317236 72319769 + MGP_WSBEiJ_P0076805 Tmem150a protein_coding protein_coding MGP_WSBEiJ_T0076051.1 MGP_WSBEiJ_G0029855.1 mouse_genomes_project 6 43080185 45480660 + MGP_WSBEiJ_P0076051 Cntnap2 protein_coding protein_coding MGP_WSBEiJ_T0076052.1 MGP_WSBEiJ_G0029855.1 mouse_genomes_project 6 44243043 44533754 + Cntnap2 protein_coding processed_transcript MGP_WSBEiJ_T0076053.1 MGP_WSBEiJ_G0029855.1 mouse_genomes_project 6 45160975 45216828 + MGP_WSBEiJ_P0076053 Cntnap2 protein_coding protein_coding MGP_WSBEiJ_T0076054.1 MGP_WSBEiJ_G0029855.1 mouse_genomes_project 6 45357847 45474844 + MGP_WSBEiJ_P0076054 Cntnap2 protein_coding protein_coding MGP_WSBEiJ_T0075820.1 MGP_WSBEiJ_G0029769.1 mouse_genomes_project 6 37094217 37137096 - MGP_WSBEiJ_P0075820 protein_coding unknown_likely_coding MGP_WSBEiJ_T0075821.1 MGP_WSBEiJ_G0029769.1 mouse_genomes_project 6 37100673 37116390 - protein_coding retained_intron MGP_WSBEiJ_T0075822.1 MGP_WSBEiJ_G0029769.1 mouse_genomes_project 6 37105645 37116418 - protein_coding processed_transcript MGP_WSBEiJ_T0075823.1 MGP_WSBEiJ_G0029769.1 mouse_genomes_project 6 37124012 37149359 - MGP_WSBEiJ_P0075823 protein_coding protein_coding MGP_WSBEiJ_T0075824.1 MGP_WSBEiJ_G0029769.1 mouse_genomes_project 6 37136949 37149339 - protein_coding processed_transcript MGP_WSBEiJ_T0075825.1 MGP_WSBEiJ_G0029769.1 mouse_genomes_project 6 37136958 37149318 - protein_coding processed_transcript MGP_WSBEiJ_T0000203.1 MGP_WSBEiJ_G0000153.1 mouse_genomes_project 6 70162609 70163190 - MGP_WSBEiJ_P0000203 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000206.1 MGP_WSBEiJ_G0000153.1 mouse_genomes_project 6 70162609 70163176 - MGP_WSBEiJ_P0000206 IG_V_gene IG_V_gene MGP_WSBEiJ_T0076935.1 MGP_WSBEiJ_G0030071.1 mouse_genomes_project 6 82289185 82299175 - MGP_WSBEiJ_P0076935 Mrpl19 protein_coding protein_coding MGP_WSBEiJ_T0076936.1 MGP_WSBEiJ_G0030071.1 mouse_genomes_project 6 82293269 82296072 - Mrpl19 protein_coding retained_intron MGP_WSBEiJ_T0076937.1 MGP_WSBEiJ_G0030071.1 mouse_genomes_project 6 82295635 82298858 - Mrpl19 protein_coding processed_transcript MGP_WSBEiJ_T0015193.1 MGP_WSBEiJ_G0013323.1 mouse_genomes_project 6 152773806 152773977 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014899.1 MGP_WSBEiJ_G0013029.1 mouse_genomes_project 6 51712106 51713292 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075766.1 MGP_WSBEiJ_G0029758.1 mouse_genomes_project 6 35990446 36048546 - MGP_WSBEiJ_P0075766 Zc3hav1 protein_coding protein_coding MGP_WSBEiJ_T0075767.1 MGP_WSBEiJ_G0029758.1 mouse_genomes_project 6 35996920 36048546 - MGP_WSBEiJ_P0075767 Zc3hav1 protein_coding protein_coding MGP_WSBEiJ_T0075768.1 MGP_WSBEiJ_G0029758.1 mouse_genomes_project 6 36002022 36048876 - MGP_WSBEiJ_P0075768 Zc3hav1 protein_coding protein_coding MGP_WSBEiJ_T0075769.1 MGP_WSBEiJ_G0029758.1 mouse_genomes_project 6 36002022 36048876 - MGP_WSBEiJ_P0075769 Zc3hav1 protein_coding protein_coding MGP_WSBEiJ_T0005029.1 MGP_WSBEiJ_G0004290.1 mouse_genomes_project 6 139517366 139519528 + Gm26653 antisense antisense MGP_WSBEiJ_T0001923.1 MGP_WSBEiJ_G0001843.1 mouse_genomes_project 6 43276288 43280156 + TEC TEC MGP_WSBEiJ_T0000277.1 MGP_WSBEiJ_G0000225.1 mouse_genomes_project 6 67723438 67723905 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0079421.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140941476 141120968 - MGP_WSBEiJ_P0079421 Eps8 protein_coding protein_coding MGP_WSBEiJ_T0079422.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140941899 141038457 - MGP_WSBEiJ_P0079422 Eps8 protein_coding protein_coding MGP_WSBEiJ_T0079423.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140942409 141120968 - MGP_WSBEiJ_P0079423 Eps8 protein_coding protein_coding MGP_WSBEiJ_T0079424.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140965704 141119983 - MGP_WSBEiJ_P0079424 Eps8 protein_coding protein_coding MGP_WSBEiJ_T0079425.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140980398 140986793 - Eps8 protein_coding processed_transcript MGP_WSBEiJ_T0079426.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140983146 141128087 - MGP_WSBEiJ_P0079426 Eps8 protein_coding protein_coding MGP_WSBEiJ_T0079427.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140983170 140986736 - Eps8 protein_coding retained_intron MGP_WSBEiJ_T0079428.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140990220 141056463 - MGP_WSBEiJ_P0079428 Eps8 protein_coding protein_coding MGP_WSBEiJ_T0079429.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 140994971 141120912 - Eps8 protein_coding processed_transcript MGP_WSBEiJ_T0079430.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 141002492 141005839 - Eps8 protein_coding retained_intron MGP_WSBEiJ_T0079431.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 141005387 141119983 - MGP_WSBEiJ_P0079431 Eps8 protein_coding protein_coding MGP_WSBEiJ_T0079432.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 141007086 141120925 - MGP_WSBEiJ_P0079432 Eps8 protein_coding protein_coding MGP_WSBEiJ_T0079433.1 MGP_WSBEiJ_G0030601.1 mouse_genomes_project 6 141034581 141038199 - Eps8 protein_coding retained_intron MGP_WSBEiJ_T0015136.1 MGP_WSBEiJ_G0013266.1 mouse_genomes_project 6 131044374 131044488 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077593.1 MGP_WSBEiJ_G0030203.1 mouse_genomes_project 6 91080477 91082634 + MGP_WSBEiJ_P0077593 protein_coding protein_coding MGP_WSBEiJ_T0076416.1 MGP_WSBEiJ_G0029938.1 mouse_genomes_project 6 53286278 53308616 + MGP_WSBEiJ_P0076416 Mturn protein_coding protein_coding MGP_WSBEiJ_T0076417.1 MGP_WSBEiJ_G0029938.1 mouse_genomes_project 6 53286408 53305907 + MGP_WSBEiJ_P0076417 Mturn protein_coding protein_coding MGP_WSBEiJ_T0076418.1 MGP_WSBEiJ_G0029938.1 mouse_genomes_project 6 53286456 53294176 + Mturn protein_coding retained_intron MGP_WSBEiJ_T0079808.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152636216 152656421 - Ipo8 protein_coding retained_intron MGP_WSBEiJ_T0079809.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152636216 152701809 - MGP_WSBEiJ_P0079809 Ipo8 protein_coding protein_coding MGP_WSBEiJ_T0079810.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152636226 152641129 - Ipo8 protein_coding retained_intron MGP_WSBEiJ_T0079811.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152641803 152644215 - Ipo8 protein_coding retained_intron MGP_WSBEiJ_T0079812.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152642411 152649151 - Ipo8 protein_coding retained_intron MGP_WSBEiJ_T0079813.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152651021 152666235 - Ipo8 protein_coding retained_intron MGP_WSBEiJ_T0079814.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152658627 152693788 - Ipo8 protein_coding retained_intron MGP_WSBEiJ_T0079815.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152669372 152687094 - Ipo8 protein_coding processed_transcript MGP_WSBEiJ_T0079816.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152669373 152701806 - MGP_WSBEiJ_P0079816 Ipo8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079817.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152669375 152701768 - MGP_WSBEiJ_P0079817 Ipo8 protein_coding protein_coding MGP_WSBEiJ_T0079818.1 MGP_WSBEiJ_G0030670.1 mouse_genomes_project 6 152688624 152691531 - Ipo8 protein_coding retained_intron MGP_WSBEiJ_T0075020.1 MGP_WSBEiJ_G0029620.1 mouse_genomes_project 6 4780691 4976636 - MGP_WSBEiJ_P0075020 Col28a1 protein_coding protein_coding MGP_WSBEiJ_T0075021.1 MGP_WSBEiJ_G0029620.1 mouse_genomes_project 6 4803512 4804995 - Col28a1 protein_coding processed_transcript MGP_WSBEiJ_T0075022.1 MGP_WSBEiJ_G0029620.1 mouse_genomes_project 6 4864395 4870849 - Col28a1 protein_coding retained_intron MGP_WSBEiJ_T0002056.1 MGP_WSBEiJ_G0001976.1 mouse_genomes_project 6 101467366 101469875 - TEC TEC MGP_WSBEiJ_T0002026.1 MGP_WSBEiJ_G0001946.1 mouse_genomes_project 6 88941437 88941695 - TEC TEC MGP_WSBEiJ_T0004882.1 MGP_WSBEiJ_G0004185.1 mouse_genomes_project 6 52361152 52414030 + Gm43938 antisense antisense MGP_WSBEiJ_T0008459.1 MGP_WSBEiJ_G0006844.1 mouse_genomes_project 6 49680377 49684701 - Gm44447 lincRNA lincRNA MGP_WSBEiJ_T0075539.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28084150 28125873 - MGP_WSBEiJ_P0075539 Cep41 protein_coding protein_coding MGP_WSBEiJ_T0075540.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28084152 28125817 - MGP_WSBEiJ_P0075540 Cep41 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075541.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28085071 28125819 - MGP_WSBEiJ_P0075541 Cep41 protein_coding protein_coding MGP_WSBEiJ_T0075542.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28085072 28101296 - Cep41 protein_coding processed_transcript MGP_WSBEiJ_T0075543.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28086225 28087503 - Cep41 protein_coding retained_intron MGP_WSBEiJ_T0075544.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28089075 28093314 - Cep41 protein_coding retained_intron MGP_WSBEiJ_T0075545.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28092925 28125212 - MGP_WSBEiJ_P0075545 Cep41 protein_coding protein_coding MGP_WSBEiJ_T0075546.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28097968 28125800 - MGP_WSBEiJ_P0075546 Cep41 protein_coding protein_coding MGP_WSBEiJ_T0075547.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28098254 28112477 - MGP_WSBEiJ_P0075547 Cep41 protein_coding protein_coding MGP_WSBEiJ_T0075548.1 MGP_WSBEiJ_G0029717.1 mouse_genomes_project 6 28111025 28125824 - MGP_WSBEiJ_P0075548 Cep41 protein_coding protein_coding MGP_WSBEiJ_T0078663.1 MGP_WSBEiJ_G0030401.1 mouse_genomes_project 6 124626034 124642471 - MGP_WSBEiJ_P0078663 Slc2a3 protein_coding protein_coding MGP_WSBEiJ_T0078664.1 MGP_WSBEiJ_G0030401.1 mouse_genomes_project 6 124626051 124642248 - Slc2a3 protein_coding retained_intron MGP_WSBEiJ_T0078665.1 MGP_WSBEiJ_G0030401.1 mouse_genomes_project 6 124628156 124642116 - MGP_WSBEiJ_P0078665 Slc2a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078666.1 MGP_WSBEiJ_G0030401.1 mouse_genomes_project 6 124629758 124631685 - Slc2a3 protein_coding retained_intron MGP_WSBEiJ_T0078667.1 MGP_WSBEiJ_G0030401.1 mouse_genomes_project 6 124635593 124707021 - MGP_WSBEiJ_P0078667 Slc2a3 protein_coding protein_coding MGP_WSBEiJ_T0078668.1 MGP_WSBEiJ_G0030401.1 mouse_genomes_project 6 124635786 124681271 - MGP_WSBEiJ_P0078668 Slc2a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078669.1 MGP_WSBEiJ_G0030401.1 mouse_genomes_project 6 124639552 124641988 - MGP_WSBEiJ_P0078669 Slc2a3 protein_coding protein_coding MGP_WSBEiJ_T0078670.1 MGP_WSBEiJ_G0030401.1 mouse_genomes_project 6 124639611 124642646 - MGP_WSBEiJ_P0078670 Slc2a3 protein_coding protein_coding MGP_WSBEiJ_T0075295.1 MGP_WSBEiJ_G0029675.1 mouse_genomes_project 6 22075127 22109361 + MGP_WSBEiJ_P0075295 Hyal5 protein_coding protein_coding MGP_WSBEiJ_T0075296.1 MGP_WSBEiJ_G0029675.1 mouse_genomes_project 6 22093636 22109206 + MGP_WSBEiJ_P0075296 Hyal5 protein_coding protein_coding MGP_WSBEiJ_T0075297.1 MGP_WSBEiJ_G0029675.1 mouse_genomes_project 6 22107937 22109146 + Hyal5 protein_coding processed_transcript MGP_WSBEiJ_T0008648.1 MGP_WSBEiJ_G0006990.1 mouse_genomes_project 6 152566375 152576462 + Gm44115 lincRNA lincRNA MGP_WSBEiJ_T0015171.1 MGP_WSBEiJ_G0013301.1 mouse_genomes_project 6 139843726 139844791 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076131.1 MGP_WSBEiJ_G0029871.1 mouse_genomes_project 6 46805736 46821594 + MGP_WSBEiJ_P0076131 Lrrc61 protein_coding protein_coding MGP_WSBEiJ_T0076132.1 MGP_WSBEiJ_G0029871.1 mouse_genomes_project 6 46805739 46819261 + MGP_WSBEiJ_P0076132 Lrrc61 protein_coding protein_coding MGP_WSBEiJ_T0076133.1 MGP_WSBEiJ_G0029871.1 mouse_genomes_project 6 46805739 46819241 + MGP_WSBEiJ_P0076133 Lrrc61 protein_coding protein_coding MGP_WSBEiJ_T0076134.1 MGP_WSBEiJ_G0029871.1 mouse_genomes_project 6 46805745 46821593 + MGP_WSBEiJ_P0076134 Lrrc61 protein_coding protein_coding MGP_WSBEiJ_T0076135.1 MGP_WSBEiJ_G0029871.1 mouse_genomes_project 6 46805751 46819136 + Lrrc61 protein_coding processed_transcript MGP_WSBEiJ_T0076136.1 MGP_WSBEiJ_G0029871.1 mouse_genomes_project 6 46805769 46819444 + MGP_WSBEiJ_P0076136 Lrrc61 protein_coding protein_coding MGP_WSBEiJ_T0015088.1 MGP_WSBEiJ_G0013218.1 mouse_genomes_project 6 118480811 118481220 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076698.1 MGP_WSBEiJ_G0030022.1 mouse_genomes_project 6 70812394 70816913 + MGP_WSBEiJ_P0076698 Foxi3 protein_coding protein_coding MGP_WSBEiJ_T0076699.1 MGP_WSBEiJ_G0030022.1 mouse_genomes_project 6 70812469 70816916 + MGP_WSBEiJ_P0076699 Foxi3 protein_coding protein_coding MGP_WSBEiJ_T0004905.1 MGP_WSBEiJ_G0004205.1 mouse_genomes_project 6 83118526 83121541 + Gm17034 antisense antisense MGP_WSBEiJ_T0015084.1 MGP_WSBEiJ_G0013214.1 mouse_genomes_project 6 117149554 117149720 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014840.1 MGP_WSBEiJ_G0012970.1 mouse_genomes_project 6 34177188 34177393 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076581.1 MGP_WSBEiJ_G0029993.1 mouse_genomes_project 6 58211146 58214310 + MGP_WSBEiJ_P0076581 Tigd2 protein_coding protein_coding MGP_WSBEiJ_T0004967.1 MGP_WSBEiJ_G0004240.1 mouse_genomes_project 6 102467709 102480687 + Gm26911 antisense antisense MGP_WSBEiJ_T0004968.1 MGP_WSBEiJ_G0004240.1 mouse_genomes_project 6 102467726 102490513 + Gm26911 antisense antisense MGP_WSBEiJ_T0004969.1 MGP_WSBEiJ_G0004240.1 mouse_genomes_project 6 102467798 102479299 + Gm26911 antisense antisense MGP_WSBEiJ_T0100920.1 MGP_WSBEiJ_G0039378.1 mouse_genomes_project 6 86767325 86768368 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099672.1 MGP_WSBEiJ_G0038335.1 mouse_genomes_project 6 98873245 98873388 + Gm23703 snoRNA snoRNA MGP_WSBEiJ_T0011458.1 MGP_WSBEiJ_G0009615.1 mouse_genomes_project 6 84119139 84119333 + Gm27893 misc_RNA misc_RNA MGP_WSBEiJ_T0077161.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84432141 84668875 + MGP_WSBEiJ_P0077161 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077162.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84432253 84668711 + MGP_WSBEiJ_P0077162 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077163.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84432253 84668711 + MGP_WSBEiJ_P0077163 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077164.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84432253 84668711 + MGP_WSBEiJ_P0077164 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077165.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84432318 84668711 + MGP_WSBEiJ_P0077165 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077166.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84432466 84668874 + MGP_WSBEiJ_P0077166 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077167.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84444139 84668874 + MGP_WSBEiJ_P0077167 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077168.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84444139 84668672 + MGP_WSBEiJ_P0077168 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077169.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84444139 84668672 + MGP_WSBEiJ_P0077169 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077170.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84444139 84668672 + MGP_WSBEiJ_P0077170 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077171.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84444140 84668875 + MGP_WSBEiJ_P0077171 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077172.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84444143 84668874 + MGP_WSBEiJ_P0077172 Dysf protein_coding protein_coding MGP_WSBEiJ_T0077173.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84444272 84668646 + MGP_WSBEiJ_P0077173 Dysf protein_coding unknown_likely_coding MGP_WSBEiJ_T0077174.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84552603 84560513 + Dysf protein_coding processed_transcript MGP_WSBEiJ_T0077175.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84553781 84565193 + Dysf protein_coding retained_intron MGP_WSBEiJ_T0077176.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84597270 84602930 + Dysf protein_coding processed_transcript MGP_WSBEiJ_T0077177.1 MGP_WSBEiJ_G0030113.1 mouse_genomes_project 6 84668298 84668856 + Dysf protein_coding processed_transcript MGP_WSBEiJ_T0000293.1 MGP_WSBEiJ_G0000241.1 mouse_genomes_project 6 69428958 69429338 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0002634.1 MGP_WSBEiJ_G0002521.1 mouse_genomes_project 6 39150618 39151233 + MGP_WSBEiJ_P0002634 Trbv30 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002635.1 MGP_WSBEiJ_G0002521.1 mouse_genomes_project 6 39150618 39151233 + MGP_WSBEiJ_P0002635 Trbv30 TR_V_gene TR_V_gene MGP_WSBEiJ_T0075412.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26821631 26832895 - Kcp protein_coding retained_intron MGP_WSBEiJ_T0075413.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26830782 26857737 - MGP_WSBEiJ_P0075413 Kcp protein_coding protein_coding MGP_WSBEiJ_T0075414.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26830786 26845724 - MGP_WSBEiJ_P0075414 Kcp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075415.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26830786 26833611 - MGP_WSBEiJ_P0075415 Kcp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075416.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26830786 26857748 - MGP_WSBEiJ_P0075416 Kcp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075417.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26832443 26833723 - Kcp protein_coding retained_intron MGP_WSBEiJ_T0075418.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26846654 26848418 - Kcp protein_coding retained_intron MGP_WSBEiJ_T0075419.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26847739 26852635 - MGP_WSBEiJ_P0075419 Kcp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075420.1 MGP_WSBEiJ_G0029700.1 mouse_genomes_project 6 26852100 26857763 - MGP_WSBEiJ_P0075420 Kcp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078244.1 MGP_WSBEiJ_G0030328.1 mouse_genomes_project 6 117281058 117293490 - MGP_WSBEiJ_P0078244 Mbd4 protein_coding protein_coding MGP_WSBEiJ_T0078245.1 MGP_WSBEiJ_G0030328.1 mouse_genomes_project 6 117281560 117288831 - Mbd4 protein_coding processed_transcript MGP_WSBEiJ_T0078246.1 MGP_WSBEiJ_G0030328.1 mouse_genomes_project 6 117282696 117293484 - MGP_WSBEiJ_P0078246 Mbd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078247.1 MGP_WSBEiJ_G0030328.1 mouse_genomes_project 6 117282696 117289092 - MGP_WSBEiJ_P0078247 Mbd4 protein_coding protein_coding MGP_WSBEiJ_T0078248.1 MGP_WSBEiJ_G0030328.1 mouse_genomes_project 6 117287811 117293407 - MGP_WSBEiJ_P0078248 Mbd4 protein_coding protein_coding MGP_WSBEiJ_T0008624.1 MGP_WSBEiJ_G0006974.1 mouse_genomes_project 6 146791233 146837225 - Gm31108 lincRNA lincRNA MGP_WSBEiJ_T0014858.1 MGP_WSBEiJ_G0012988.1 mouse_genomes_project 6 40697387 40697818 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078213.1 MGP_WSBEiJ_G0030320.1 mouse_genomes_project 6 116964622 116975663 + MGP_WSBEiJ_P0078213 Tsen2 protein_coding protein_coding MGP_WSBEiJ_T0078214.1 MGP_WSBEiJ_G0030320.1 mouse_genomes_project 6 116964622 117000086 + MGP_WSBEiJ_P0078214 Tsen2 protein_coding protein_coding MGP_WSBEiJ_T0078215.1 MGP_WSBEiJ_G0030320.1 mouse_genomes_project 6 116964660 116981178 + Tsen2 protein_coding processed_transcript MGP_WSBEiJ_T0078216.1 MGP_WSBEiJ_G0030320.1 mouse_genomes_project 6 116964664 116973752 + Tsen2 protein_coding retained_intron MGP_WSBEiJ_T0078217.1 MGP_WSBEiJ_G0030320.1 mouse_genomes_project 6 116995928 116999449 + Tsen2 protein_coding retained_intron MGP_WSBEiJ_T0079727.1 MGP_WSBEiJ_G0030653.1 mouse_genomes_project 6 150402878 150435768 - MGP_WSBEiJ_P0079727 Tm7sf3 protein_coding protein_coding MGP_WSBEiJ_T0079728.1 MGP_WSBEiJ_G0030653.1 mouse_genomes_project 6 150411422 150435669 - MGP_WSBEiJ_P0079728 Tm7sf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079729.1 MGP_WSBEiJ_G0030653.1 mouse_genomes_project 6 150420936 150443458 - Tm7sf3 protein_coding processed_transcript MGP_WSBEiJ_T0079730.1 MGP_WSBEiJ_G0030653.1 mouse_genomes_project 6 150422947 150443468 - Tm7sf3 protein_coding processed_transcript MGP_WSBEiJ_T0011474.1 MGP_WSBEiJ_G0009631.1 mouse_genomes_project 6 145903894 145904183 - Gm25430 misc_RNA misc_RNA MGP_WSBEiJ_T0077463.1 MGP_WSBEiJ_G0030174.1 mouse_genomes_project 6 88710350 88759740 - MGP_WSBEiJ_P0077463 Rab7 protein_coding protein_coding MGP_WSBEiJ_T0077464.1 MGP_WSBEiJ_G0030174.1 mouse_genomes_project 6 88715304 88759726 - MGP_WSBEiJ_P0077464 Rab7 protein_coding protein_coding MGP_WSBEiJ_T0077465.1 MGP_WSBEiJ_G0030174.1 mouse_genomes_project 6 88715362 88759693 - MGP_WSBEiJ_P0077465 Rab7 protein_coding protein_coding MGP_WSBEiJ_T0015120.1 MGP_WSBEiJ_G0013250.1 mouse_genomes_project 6 127259424 127266294 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079593.1 MGP_WSBEiJ_G0030634.1 mouse_genomes_project 6 146427140 146447305 + MGP_WSBEiJ_P0079593 Cmas protein_coding protein_coding MGP_WSBEiJ_T0079594.1 MGP_WSBEiJ_G0030634.1 mouse_genomes_project 6 146427208 146441081 + MGP_WSBEiJ_P0079594 Cmas protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079595.1 MGP_WSBEiJ_G0030634.1 mouse_genomes_project 6 146427218 146446252 + MGP_WSBEiJ_P0079595 Cmas protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079596.1 MGP_WSBEiJ_G0030634.1 mouse_genomes_project 6 146427229 146443814 + MGP_WSBEiJ_P0079596 Cmas protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079597.1 MGP_WSBEiJ_G0030634.1 mouse_genomes_project 6 146440489 146442905 + Cmas protein_coding retained_intron MGP_WSBEiJ_T0000199.1 MGP_WSBEiJ_G0000149.1 mouse_genomes_project 6 69894463 69895036 - MGP_WSBEiJ_P0000199 Igkv8-24 IG_V_gene IG_V_gene MGP_WSBEiJ_T0075568.1 MGP_WSBEiJ_G0029720.1 mouse_genomes_project 6 28323445 28332965 - Tsga13 protein_coding processed_transcript MGP_WSBEiJ_T0075569.1 MGP_WSBEiJ_G0029720.1 mouse_genomes_project 6 28323445 28344985 - MGP_WSBEiJ_P0075569 Tsga13 protein_coding protein_coding MGP_WSBEiJ_T0075570.1 MGP_WSBEiJ_G0029720.1 mouse_genomes_project 6 28323679 28329998 - Tsga13 protein_coding retained_intron MGP_WSBEiJ_T0077540.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89645120 89655413 + MGP_WSBEiJ_P0077540 Tpra1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0077541.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89645330 89652587 + Tpra1 protein_coding processed_transcript MGP_WSBEiJ_T0077542.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89645348 89649130 + Tpra1 protein_coding retained_intron MGP_WSBEiJ_T0077543.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89645348 89649601 + Tpra1 protein_coding processed_transcript MGP_WSBEiJ_T0077544.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89645368 89653536 + Tpra1 protein_coding processed_transcript MGP_WSBEiJ_T0077545.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89645373 89653400 + MGP_WSBEiJ_P0077545 Tpra1 protein_coding protein_coding MGP_WSBEiJ_T0077546.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89645383 89653384 + MGP_WSBEiJ_P0077546 Tpra1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077547.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89645484 89655404 + MGP_WSBEiJ_P0077547 Tpra1 protein_coding protein_coding MGP_WSBEiJ_T0077548.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89648666 89652474 + Tpra1 protein_coding processed_transcript MGP_WSBEiJ_T0077549.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89648987 89650797 + Tpra1 protein_coding processed_transcript MGP_WSBEiJ_T0077550.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89648989 89654920 + MGP_WSBEiJ_P0077550 Tpra1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077551.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89649007 89653993 + MGP_WSBEiJ_P0077551 Tpra1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077552.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89649073 89653821 + MGP_WSBEiJ_P0077552 Tpra1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077553.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89651011 89655411 + MGP_WSBEiJ_P0077553 Tpra1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077554.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89651011 89655157 + MGP_WSBEiJ_P0077554 Tpra1 protein_coding protein_coding MGP_WSBEiJ_T0077555.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89651025 89654274 + MGP_WSBEiJ_P0077555 Tpra1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077556.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89651224 89652700 + Tpra1 protein_coding processed_transcript MGP_WSBEiJ_T0077557.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89651224 89652716 + Tpra1 protein_coding retained_intron MGP_WSBEiJ_T0077558.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89653330 89654122 + Tpra1 protein_coding retained_intron MGP_WSBEiJ_T0077559.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89653395 89653671 + Tpra1 protein_coding retained_intron MGP_WSBEiJ_T0077560.1 MGP_WSBEiJ_G0030186.1 mouse_genomes_project 6 89653771 89654928 + Tpra1 protein_coding retained_intron MGP_WSBEiJ_T0098401.1 MGP_WSBEiJ_G0037064.1 mouse_genomes_project 6 7679381 7679488 - Gm26058 snRNA snRNA MGP_WSBEiJ_T0014916.1 MGP_WSBEiJ_G0013046.1 mouse_genomes_project 6 60233219 60234105 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100904.1 MGP_WSBEiJ_G0039362.1 mouse_genomes_project 6 56889833 56890746 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079134.1 MGP_WSBEiJ_G0030505.1 mouse_genomes_project 6 131365966 131377305 + MGP_WSBEiJ_P0079134 Clec2i protein_coding protein_coding MGP_WSBEiJ_T0079135.1 MGP_WSBEiJ_G0030505.1 mouse_genomes_project 6 131365967 131377035 + Clec2i protein_coding retained_intron MGP_WSBEiJ_T0079136.1 MGP_WSBEiJ_G0030505.1 mouse_genomes_project 6 131365976 131376001 + MGP_WSBEiJ_P0079136 Clec2i protein_coding protein_coding MGP_WSBEiJ_T0015059.1 MGP_WSBEiJ_G0013189.1 mouse_genomes_project 6 108931329 108931978 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001985.1 MGP_WSBEiJ_G0001905.1 mouse_genomes_project 6 77898049 77900844 - TEC TEC MGP_WSBEiJ_T0077010.1 MGP_WSBEiJ_G0030087.1 mouse_genomes_project 6 83475736 83483788 + MGP_WSBEiJ_P0077010 Gm42688 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076397.1 MGP_WSBEiJ_G0029934.1 mouse_genomes_project 6 53008412 53084401 + MGP_WSBEiJ_P0076397 Wipf3 protein_coding protein_coding MGP_WSBEiJ_T0076398.1 MGP_WSBEiJ_G0029934.1 mouse_genomes_project 6 53008412 53084401 + MGP_WSBEiJ_P0076398 Wipf3 protein_coding protein_coding MGP_WSBEiJ_T0076399.1 MGP_WSBEiJ_G0029934.1 mouse_genomes_project 6 53031367 53084404 + MGP_WSBEiJ_P0076399 Wipf3 protein_coding protein_coding MGP_WSBEiJ_T0076400.1 MGP_WSBEiJ_G0029934.1 mouse_genomes_project 6 53031367 53084404 + MGP_WSBEiJ_P0076400 Wipf3 protein_coding protein_coding MGP_WSBEiJ_T0076401.1 MGP_WSBEiJ_G0029934.1 mouse_genomes_project 6 53050068 53064975 + Wipf3 protein_coding processed_transcript MGP_WSBEiJ_T0076402.1 MGP_WSBEiJ_G0029934.1 mouse_genomes_project 6 53067296 53072192 + Wipf3 protein_coding retained_intron MGP_WSBEiJ_T0075864.1 MGP_WSBEiJ_G0029779.1 mouse_genomes_project 6 38160880 38231629 + MGP_WSBEiJ_P0075864 Agk protein_coding protein_coding MGP_WSBEiJ_T0075865.1 MGP_WSBEiJ_G0029779.1 mouse_genomes_project 6 38161202 38204658 + Agk protein_coding retained_intron MGP_WSBEiJ_T0075866.1 MGP_WSBEiJ_G0029779.1 mouse_genomes_project 6 38161204 38162485 + Agk protein_coding retained_intron MGP_WSBEiJ_T0075867.1 MGP_WSBEiJ_G0029779.1 mouse_genomes_project 6 38161225 38184991 + Agk protein_coding retained_intron MGP_WSBEiJ_T0075868.1 MGP_WSBEiJ_G0029779.1 mouse_genomes_project 6 38165109 38183641 + Agk protein_coding processed_transcript MGP_WSBEiJ_T0075869.1 MGP_WSBEiJ_G0029779.1 mouse_genomes_project 6 38165109 38193112 + MGP_WSBEiJ_P0075869 Agk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075870.1 MGP_WSBEiJ_G0029779.1 mouse_genomes_project 6 38185538 38188530 + Agk protein_coding retained_intron MGP_WSBEiJ_T0075871.1 MGP_WSBEiJ_G0029779.1 mouse_genomes_project 6 38211812 38231533 + Agk protein_coding retained_intron MGP_WSBEiJ_T0079198.1 MGP_WSBEiJ_G0030523.1 mouse_genomes_project 6 132212762 132216989 - MGP_WSBEiJ_P0079198 Klrc3 protein_coding protein_coding MGP_WSBEiJ_T0079199.1 MGP_WSBEiJ_G0030523.1 mouse_genomes_project 6 132212762 132216989 - MGP_WSBEiJ_P0079199 Klrc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079200.1 MGP_WSBEiJ_G0030523.1 mouse_genomes_project 6 132212783 132216989 - MGP_WSBEiJ_P0079200 Klrc3 protein_coding protein_coding MGP_WSBEiJ_T0010619.1 MGP_WSBEiJ_G0008776.1 mouse_genomes_project 6 108868615 108868741 - Gm27690 miRNA miRNA MGP_WSBEiJ_T0015015.1 MGP_WSBEiJ_G0013145.1 mouse_genomes_project 6 90647282 90648242 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075915.1 MGP_WSBEiJ_G0029801.1 mouse_genomes_project 6 39250176 39253911 - MGP_WSBEiJ_P0075915 protein_coding protein_coding MGP_WSBEiJ_T0000285.1 MGP_WSBEiJ_G0000233.1 mouse_genomes_project 6 68408938 68409346 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0100909.1 MGP_WSBEiJ_G0039367.1 mouse_genomes_project 6 57193380 57194306 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008593.1 MGP_WSBEiJ_G0006954.1 mouse_genomes_project 6 130161280 130164930 - Gm42810 lincRNA lincRNA MGP_WSBEiJ_T0014777.1 MGP_WSBEiJ_G0012907.1 mouse_genomes_project 6 1064974 1067346 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014967.1 MGP_WSBEiJ_G0013097.1 mouse_genomes_project 6 68378731 68379223 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015041.1 MGP_WSBEiJ_G0013171.1 mouse_genomes_project 6 101027971 101028578 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001989.1 MGP_WSBEiJ_G0001909.1 mouse_genomes_project 6 80500039 80502054 + TEC TEC MGP_WSBEiJ_T0015049.1 MGP_WSBEiJ_G0013179.1 mouse_genomes_project 6 103351565 103352350 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000021.1 MGP_WSBEiJ_G0000015.1 mouse_genomes_project 6 70564410 70564942 + MGP_WSBEiJ_P0000021 Igkc IG_C_gene IG_C_gene MGP_WSBEiJ_T0015087.1 MGP_WSBEiJ_G0013217.1 mouse_genomes_project 6 118452174 118452604 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077634.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91833277 91941832 - MGP_WSBEiJ_P0077634 Nup210 protein_coding protein_coding MGP_WSBEiJ_T0077635.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91833279 91941822 - MGP_WSBEiJ_P0077635 Nup210 protein_coding protein_coding MGP_WSBEiJ_T0077636.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91833279 91878613 - MGP_WSBEiJ_P0077636 Nup210 protein_coding protein_coding MGP_WSBEiJ_T0077637.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91833526 91839066 - Nup210 protein_coding processed_transcript MGP_WSBEiJ_T0077638.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91840369 91846807 - Nup210 protein_coding retained_intron MGP_WSBEiJ_T0077639.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91840548 91845350 - Nup210 protein_coding processed_transcript MGP_WSBEiJ_T0077640.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91847877 91851556 - Nup210 protein_coding retained_intron MGP_WSBEiJ_T0077641.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91875819 91876855 - Nup210 protein_coding processed_transcript MGP_WSBEiJ_T0077642.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91883994 91888719 - Nup210 protein_coding processed_transcript MGP_WSBEiJ_T0077643.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91908376 91921194 - Nup210 protein_coding retained_intron MGP_WSBEiJ_T0077644.1 MGP_WSBEiJ_G0030213.1 mouse_genomes_project 6 91939359 91941799 - Nup210 protein_coding retained_intron MGP_WSBEiJ_T0008507.1 MGP_WSBEiJ_G0006885.1 mouse_genomes_project 6 83181788 83196858 + Gm43878 lincRNA lincRNA MGP_WSBEiJ_T0008508.1 MGP_WSBEiJ_G0006885.1 mouse_genomes_project 6 83190162 83196870 + Gm43878 lincRNA lincRNA MGP_WSBEiJ_T0008509.1 MGP_WSBEiJ_G0006885.1 mouse_genomes_project 6 83190197 83200868 + Gm43878 lincRNA lincRNA MGP_WSBEiJ_T0079050.1 MGP_WSBEiJ_G0030484.1 mouse_genomes_project 6 129966290 130050098 - MGP_WSBEiJ_P0079050 Prmt8 protein_coding protein_coding MGP_WSBEiJ_T0076855.1 MGP_WSBEiJ_G0030051.1 mouse_genomes_project 6 72562047 72595601 - MGP_WSBEiJ_P0076855 Elmod3 protein_coding protein_coding MGP_WSBEiJ_T0076856.1 MGP_WSBEiJ_G0030051.1 mouse_genomes_project 6 72562059 72595602 - MGP_WSBEiJ_P0076856 Elmod3 protein_coding protein_coding MGP_WSBEiJ_T0076857.1 MGP_WSBEiJ_G0030051.1 mouse_genomes_project 6 72563633 72595654 - MGP_WSBEiJ_P0076857 Elmod3 protein_coding protein_coding MGP_WSBEiJ_T0076858.1 MGP_WSBEiJ_G0030051.1 mouse_genomes_project 6 72565419 72595620 - MGP_WSBEiJ_P0076858 Elmod3 protein_coding protein_coding MGP_WSBEiJ_T0076859.1 MGP_WSBEiJ_G0030051.1 mouse_genomes_project 6 72580507 72592286 - Elmod3 protein_coding processed_transcript MGP_WSBEiJ_T0076860.1 MGP_WSBEiJ_G0030051.1 mouse_genomes_project 6 72584902 72595672 - MGP_WSBEiJ_P0076860 Elmod3 protein_coding protein_coding MGP_WSBEiJ_T0076352.1 MGP_WSBEiJ_G0029927.1 mouse_genomes_project 6 51227749 51283747 + MGP_WSBEiJ_P0076352 Tax1bp1 protein_coding protein_coding MGP_WSBEiJ_T0076353.1 MGP_WSBEiJ_G0029927.1 mouse_genomes_project 6 51227770 51248748 + MGP_WSBEiJ_P0076353 Tax1bp1 protein_coding protein_coding MGP_WSBEiJ_T0076354.1 MGP_WSBEiJ_G0029927.1 mouse_genomes_project 6 51227783 51247070 + Tax1bp1 protein_coding retained_intron MGP_WSBEiJ_T0076355.1 MGP_WSBEiJ_G0029927.1 mouse_genomes_project 6 51228239 51248782 + MGP_WSBEiJ_P0076355 Tax1bp1 protein_coding protein_coding MGP_WSBEiJ_T0076356.1 MGP_WSBEiJ_G0029927.1 mouse_genomes_project 6 51228370 51242826 + MGP_WSBEiJ_P0076356 Tax1bp1 protein_coding protein_coding MGP_WSBEiJ_T0076357.1 MGP_WSBEiJ_G0029927.1 mouse_genomes_project 6 51256710 51258638 + Tax1bp1 protein_coding processed_transcript MGP_WSBEiJ_T0076358.1 MGP_WSBEiJ_G0029927.1 mouse_genomes_project 6 51274580 51279253 + Tax1bp1 protein_coding retained_intron MGP_WSBEiJ_T0002083.1 MGP_WSBEiJ_G0002003.1 mouse_genomes_project 6 117724168 117727826 - TEC TEC MGP_WSBEiJ_T0000281.1 MGP_WSBEiJ_G0000229.1 mouse_genomes_project 6 68117730 68117988 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0100917.1 MGP_WSBEiJ_G0039375.1 mouse_genomes_project 6 70287414 70287562 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079031.1 MGP_WSBEiJ_G0030481.1 mouse_genomes_project 6 129360141 129388115 - MGP_WSBEiJ_P0079031 Ccnd2 protein_coding protein_coding MGP_WSBEiJ_T0079032.1 MGP_WSBEiJ_G0030481.1 mouse_genomes_project 6 129365484 129376207 - Ccnd2 protein_coding processed_transcript MGP_WSBEiJ_T0079033.1 MGP_WSBEiJ_G0030481.1 mouse_genomes_project 6 129376147 129383742 - Ccnd2 protein_coding processed_transcript MGP_WSBEiJ_T0079034.1 MGP_WSBEiJ_G0030481.1 mouse_genomes_project 6 129383076 129389247 - MGP_WSBEiJ_P0079034 Ccnd2 protein_coding protein_coding MGP_WSBEiJ_T0079035.1 MGP_WSBEiJ_G0030481.1 mouse_genomes_project 6 129384554 129388062 - Ccnd2 protein_coding retained_intron MGP_WSBEiJ_T0079036.1 MGP_WSBEiJ_G0030481.1 mouse_genomes_project 6 129385337 129388088 - MGP_WSBEiJ_P0079036 Ccnd2 protein_coding protein_coding MGP_WSBEiJ_T0079037.1 MGP_WSBEiJ_G0030481.1 mouse_genomes_project 6 129385354 129388062 - MGP_WSBEiJ_P0079037 Ccnd2 protein_coding protein_coding MGP_WSBEiJ_T0079038.1 MGP_WSBEiJ_G0030481.1 mouse_genomes_project 6 129387837 129388016 - Ccnd2 protein_coding processed_transcript MGP_WSBEiJ_T0079072.1 MGP_WSBEiJ_G0030489.1 mouse_genomes_project 6 130725777 130731579 - MGP_WSBEiJ_P0079072 protein_coding protein_coding MGP_WSBEiJ_T0079073.1 MGP_WSBEiJ_G0030489.1 mouse_genomes_project 6 130726137 130731635 - MGP_WSBEiJ_P0079073 protein_coding protein_coding MGP_WSBEiJ_T0079074.1 MGP_WSBEiJ_G0030489.1 mouse_genomes_project 6 130726142 130731635 - MGP_WSBEiJ_P0079074 protein_coding protein_coding MGP_WSBEiJ_T0079075.1 MGP_WSBEiJ_G0030489.1 mouse_genomes_project 6 130726748 130731346 - MGP_WSBEiJ_P0079075 protein_coding protein_coding MGP_WSBEiJ_T0079076.1 MGP_WSBEiJ_G0030489.1 mouse_genomes_project 6 130728006 130731462 - MGP_WSBEiJ_P0079076 protein_coding protein_coding MGP_WSBEiJ_T0079077.1 MGP_WSBEiJ_G0030489.1 mouse_genomes_project 6 130730645 130731678 - protein_coding processed_transcript MGP_WSBEiJ_T0001915.1 MGP_WSBEiJ_G0001835.1 mouse_genomes_project 6 38750515 38751854 - TEC TEC MGP_WSBEiJ_T0002098.1 MGP_WSBEiJ_G0002017.1 mouse_genomes_project 6 129564928 129567153 + TEC TEC MGP_WSBEiJ_T0011462.1 MGP_WSBEiJ_G0009619.1 mouse_genomes_project 6 101084244 101084566 - Gm24248 misc_RNA misc_RNA MGP_WSBEiJ_T0004869.1 MGP_WSBEiJ_G0004179.1 mouse_genomes_project 6 48918092 48947601 + 5430402O13Rik antisense antisense MGP_WSBEiJ_T0004870.1 MGP_WSBEiJ_G0004179.1 mouse_genomes_project 6 48918187 48947558 + 5430402O13Rik antisense antisense MGP_WSBEiJ_T0001981.1 MGP_WSBEiJ_G0001901.1 mouse_genomes_project 6 77621904 77626736 - TEC TEC MGP_WSBEiJ_T0015130.1 MGP_WSBEiJ_G0013260.1 mouse_genomes_project 6 129620176 129620709 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076428.1 MGP_WSBEiJ_G0029941.1 mouse_genomes_project 6 53601975 53612724 - MGP_WSBEiJ_P0076428 Ggct protein_coding protein_coding MGP_WSBEiJ_T0076429.1 MGP_WSBEiJ_G0029941.1 mouse_genomes_project 6 53605068 53612481 - Ggct protein_coding processed_transcript MGP_WSBEiJ_T0076430.1 MGP_WSBEiJ_G0029941.1 mouse_genomes_project 6 53605352 53612635 - MGP_WSBEiJ_P0076430 Ggct protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076431.1 MGP_WSBEiJ_G0029941.1 mouse_genomes_project 6 53605376 53612637 - MGP_WSBEiJ_P0076431 Ggct protein_coding protein_coding MGP_WSBEiJ_T0076432.1 MGP_WSBEiJ_G0029941.1 mouse_genomes_project 6 53605901 53612637 - Ggct protein_coding retained_intron MGP_WSBEiJ_T0076433.1 MGP_WSBEiJ_G0029941.1 mouse_genomes_project 6 53608924 53612397 - Ggct protein_coding retained_intron MGP_WSBEiJ_T0004867.1 MGP_WSBEiJ_G0004177.1 mouse_genomes_project 6 46866586 46874975 - Gm44119 antisense antisense MGP_WSBEiJ_T0005013.1 MGP_WSBEiJ_G0004276.1 mouse_genomes_project 6 130229318 130239461 - Gm15870 antisense antisense MGP_WSBEiJ_T0076552.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57584331 57666260 + MGP_WSBEiJ_P0076552 Abcg2 protein_coding protein_coding MGP_WSBEiJ_T0076553.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57641240 57666514 + Abcg2 protein_coding retained_intron MGP_WSBEiJ_T0076554.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57641254 57666975 + MGP_WSBEiJ_P0076554 Abcg2 protein_coding protein_coding MGP_WSBEiJ_T0076555.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57641254 57695210 + MGP_WSBEiJ_P0076555 Abcg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076556.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57641258 57692895 + MGP_WSBEiJ_P0076556 Abcg2 protein_coding protein_coding MGP_WSBEiJ_T0076557.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57641258 57694852 + MGP_WSBEiJ_P0076557 Abcg2 protein_coding protein_coding MGP_WSBEiJ_T0076558.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57641276 57666975 + MGP_WSBEiJ_P0076558 Abcg2 protein_coding protein_coding MGP_WSBEiJ_T0076559.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57657388 57698803 + MGP_WSBEiJ_P0076559 Abcg2 protein_coding protein_coding MGP_WSBEiJ_T0076560.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57665139 57666476 + Abcg2 protein_coding retained_intron MGP_WSBEiJ_T0076561.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57676991 57694716 + MGP_WSBEiJ_P0076561 Abcg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076562.1 MGP_WSBEiJ_G0029989.1 mouse_genomes_project 6 57680045 57687060 + Abcg2 protein_coding retained_intron MGP_WSBEiJ_T0079475.1 MGP_WSBEiJ_G0030608.1 mouse_genomes_project 6 143075401 143084395 - MGP_WSBEiJ_P0079475 Rergl protein_coding protein_coding MGP_WSBEiJ_T0079401.1 MGP_WSBEiJ_G0030597.1 mouse_genomes_project 6 140339333 140360917 - MGP_WSBEiJ_P0079401 protein_coding unknown_likely_coding MGP_WSBEiJ_T0079403.1 MGP_WSBEiJ_G0030597.1 mouse_genomes_project 6 140339893 140360881 - MGP_WSBEiJ_P0079403 protein_coding protein_coding MGP_WSBEiJ_T0079404.1 MGP_WSBEiJ_G0030597.1 mouse_genomes_project 6 140350056 140358614 - MGP_WSBEiJ_P0079404 protein_coding protein_coding MGP_WSBEiJ_T0075310.1 MGP_WSBEiJ_G0029679.1 mouse_genomes_project 6 24519682 25416437 - MGP_WSBEiJ_P0075310 Grm8 protein_coding protein_coding MGP_WSBEiJ_T0075311.1 MGP_WSBEiJ_G0029679.1 mouse_genomes_project 6 24519691 25408026 - MGP_WSBEiJ_P0075311 Grm8 protein_coding protein_coding MGP_WSBEiJ_T0075312.1 MGP_WSBEiJ_G0029679.1 mouse_genomes_project 6 24520175 25408096 - MGP_WSBEiJ_P0075312 Grm8 protein_coding protein_coding MGP_WSBEiJ_T0075313.1 MGP_WSBEiJ_G0029679.1 mouse_genomes_project 6 24869797 25417055 - MGP_WSBEiJ_P0075313 Grm8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0075314.1 MGP_WSBEiJ_G0029679.1 mouse_genomes_project 6 25025269 25415226 - MGP_WSBEiJ_P0075314 Grm8 protein_coding protein_coding MGP_WSBEiJ_T0075315.1 MGP_WSBEiJ_G0029679.1 mouse_genomes_project 6 25206000 25417070 - Grm8 protein_coding processed_transcript MGP_WSBEiJ_T0075316.1 MGP_WSBEiJ_G0029679.1 mouse_genomes_project 6 25407964 25415030 - MGP_WSBEiJ_P0075316 Grm8 protein_coding protein_coding MGP_WSBEiJ_T0075317.1 MGP_WSBEiJ_G0029679.1 mouse_genomes_project 6 25413927 25416277 - Grm8 protein_coding processed_transcript MGP_WSBEiJ_T0008539.1 MGP_WSBEiJ_G0006907.1 mouse_genomes_project 6 92286260 92288251 - lincRNA lincRNA MGP_WSBEiJ_T0011464.1 MGP_WSBEiJ_G0009621.1 mouse_genomes_project 6 113030931 113031227 + Gm24005 misc_RNA misc_RNA MGP_WSBEiJ_T0078776.1 MGP_WSBEiJ_G0030432.1 mouse_genomes_project 6 126843338 126858804 - MGP_WSBEiJ_P0078776 protein_coding protein_coding MGP_WSBEiJ_T0078777.1 MGP_WSBEiJ_G0030432.1 mouse_genomes_project 6 126845962 126846416 - protein_coding processed_transcript MGP_WSBEiJ_T0078778.1 MGP_WSBEiJ_G0030432.1 mouse_genomes_project 6 126848509 126856842 - MGP_WSBEiJ_P0078778 protein_coding protein_coding MGP_WSBEiJ_T0078890.1 MGP_WSBEiJ_G0030450.1 mouse_genomes_project 6 127167988 127173711 + MGP_WSBEiJ_P0078890 Acrbp protein_coding protein_coding MGP_WSBEiJ_T0078891.1 MGP_WSBEiJ_G0030450.1 mouse_genomes_project 6 127168247 127169793 + MGP_WSBEiJ_P0078891 Acrbp protein_coding protein_coding MGP_WSBEiJ_T0078892.1 MGP_WSBEiJ_G0030450.1 mouse_genomes_project 6 127168259 127182804 + MGP_WSBEiJ_P0078892 Acrbp protein_coding protein_coding MGP_WSBEiJ_T0078893.1 MGP_WSBEiJ_G0030450.1 mouse_genomes_project 6 127168267 127169843 + MGP_WSBEiJ_P0078893 Acrbp protein_coding protein_coding MGP_WSBEiJ_T0078894.1 MGP_WSBEiJ_G0030450.1 mouse_genomes_project 6 127170148 127173710 + Acrbp protein_coding processed_transcript MGP_WSBEiJ_T0078895.1 MGP_WSBEiJ_G0030450.1 mouse_genomes_project 6 127173318 127174725 + Acrbp protein_coding retained_intron MGP_WSBEiJ_T0078896.1 MGP_WSBEiJ_G0030450.1 mouse_genomes_project 6 127181725 127182779 + Acrbp protein_coding retained_intron MGP_WSBEiJ_T0078941.1 MGP_WSBEiJ_G0030458.1 mouse_genomes_project 6 127351339 127358106 + MGP_WSBEiJ_P0078941 Vamp1 protein_coding protein_coding MGP_WSBEiJ_T0078942.1 MGP_WSBEiJ_G0030458.1 mouse_genomes_project 6 127351369 127357963 + MGP_WSBEiJ_P0078942 Vamp1 protein_coding protein_coding MGP_WSBEiJ_T0078943.1 MGP_WSBEiJ_G0030458.1 mouse_genomes_project 6 127351369 127377041 + MGP_WSBEiJ_P0078943 Vamp1 protein_coding protein_coding MGP_WSBEiJ_T0078944.1 MGP_WSBEiJ_G0030458.1 mouse_genomes_project 6 127354373 127357452 + MGP_WSBEiJ_P0078944 Vamp1 protein_coding protein_coding MGP_WSBEiJ_T0078946.1 MGP_WSBEiJ_G0030458.1 mouse_genomes_project 6 127367067 127381757 + Vamp1 protein_coding processed_transcript MGP_WSBEiJ_T0078947.1 MGP_WSBEiJ_G0030458.1 mouse_genomes_project 6 127367067 127375726 + Vamp1 protein_coding processed_transcript MGP_WSBEiJ_T0000276.1 MGP_WSBEiJ_G0000224.1 mouse_genomes_project 6 67712484 67713217 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0077916.1 MGP_WSBEiJ_G0030268.1 mouse_genomes_project 6 108959587 109000161 + MGP_WSBEiJ_P0077916 Lrrn1 protein_coding protein_coding MGP_WSBEiJ_T0075421.1 MGP_WSBEiJ_G0029701.1 mouse_genomes_project 6 26878680 26889353 + MGP_WSBEiJ_P0075421 Irf5 protein_coding protein_coding MGP_WSBEiJ_T0075422.1 MGP_WSBEiJ_G0029701.1 mouse_genomes_project 6 26878763 26893814 + MGP_WSBEiJ_P0075422 Irf5 protein_coding protein_coding MGP_WSBEiJ_T0075423.1 MGP_WSBEiJ_G0029701.1 mouse_genomes_project 6 26880325 26886031 + MGP_WSBEiJ_P0075423 Irf5 protein_coding protein_coding MGP_WSBEiJ_T0075424.1 MGP_WSBEiJ_G0029701.1 mouse_genomes_project 6 26881315 26889353 + MGP_WSBEiJ_P0075424 Irf5 protein_coding protein_coding MGP_WSBEiJ_T0075425.1 MGP_WSBEiJ_G0029701.1 mouse_genomes_project 6 26883281 26887380 + MGP_WSBEiJ_P0075425 Irf5 protein_coding protein_coding MGP_WSBEiJ_T0075429.1 MGP_WSBEiJ_G0029701.1 mouse_genomes_project 6 26893089 26893801 + Irf5 protein_coding processed_transcript MGP_WSBEiJ_T0079245.1 MGP_WSBEiJ_G0030547.1 mouse_genomes_project 6 135849712 135850642 - MGP_WSBEiJ_P0079245 Tas2r122 protein_coding protein_coding MGP_WSBEiJ_T0015050.1 MGP_WSBEiJ_G0013180.1 mouse_genomes_project 6 103965663 103967773 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015003.1 MGP_WSBEiJ_G0013133.1 mouse_genomes_project 6 85579797 85579939 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008397.1 MGP_WSBEiJ_G0006804.1 mouse_genomes_project 6 27879036 27882161 + 1700012C14Rik lincRNA lincRNA MGP_WSBEiJ_T0008398.1 MGP_WSBEiJ_G0006804.1 mouse_genomes_project 6 27879893 27882213 + 1700012C14Rik lincRNA lincRNA MGP_WSBEiJ_T0014839.1 MGP_WSBEiJ_G0012969.1 mouse_genomes_project 6 32383899 32384595 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001895.1 MGP_WSBEiJ_G0001815.1 mouse_genomes_project 6 25502125 25509128 - TEC TEC MGP_WSBEiJ_T0078829.1 MGP_WSBEiJ_G0030440.1 mouse_genomes_project 6 126945837 126963741 - MGP_WSBEiJ_P0078829 P3h3 protein_coding protein_coding MGP_WSBEiJ_T0078830.1 MGP_WSBEiJ_G0030440.1 mouse_genomes_project 6 126945954 126963718 - MGP_WSBEiJ_P0078830 P3h3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078831.1 MGP_WSBEiJ_G0030440.1 mouse_genomes_project 6 126946242 126948524 - P3h3 protein_coding retained_intron MGP_WSBEiJ_T0078832.1 MGP_WSBEiJ_G0030440.1 mouse_genomes_project 6 126951273 126956901 - P3h3 protein_coding retained_intron MGP_WSBEiJ_T0078833.1 MGP_WSBEiJ_G0030440.1 mouse_genomes_project 6 126951921 126960820 - P3h3 protein_coding retained_intron MGP_WSBEiJ_T0078834.1 MGP_WSBEiJ_G0030440.1 mouse_genomes_project 6 126951963 126960723 - P3h3 protein_coding retained_intron MGP_WSBEiJ_T0078835.1 MGP_WSBEiJ_G0030440.1 mouse_genomes_project 6 126960291 126961066 - P3h3 protein_coding retained_intron MGP_WSBEiJ_T0008416.1 MGP_WSBEiJ_G0006816.1 mouse_genomes_project 6 29116698 29120610 - lincRNA lincRNA MGP_WSBEiJ_T0079620.1 MGP_WSBEiJ_G0030638.1 mouse_genomes_project 6 146851707 146903201 + MGP_WSBEiJ_P0079620 Etnk1 protein_coding protein_coding MGP_WSBEiJ_T0079621.1 MGP_WSBEiJ_G0030638.1 mouse_genomes_project 6 146851716 146893607 + MGP_WSBEiJ_P0079621 Etnk1 protein_coding protein_coding MGP_WSBEiJ_T0079622.1 MGP_WSBEiJ_G0030638.1 mouse_genomes_project 6 146851740 146876669 + Etnk1 protein_coding retained_intron MGP_WSBEiJ_T0079623.1 MGP_WSBEiJ_G0030638.1 mouse_genomes_project 6 146851740 146918150 + MGP_WSBEiJ_P0079623 Etnk1 protein_coding protein_coding MGP_WSBEiJ_T0075876.1 MGP_WSBEiJ_G0029781.1 mouse_genomes_project 6 38279809 38295335 + MGP_WSBEiJ_P0075876 Wee2 protein_coding protein_coding MGP_WSBEiJ_T0075877.1 MGP_WSBEiJ_G0029781.1 mouse_genomes_project 6 38283526 38307090 + MGP_WSBEiJ_P0075877 Wee2 protein_coding protein_coding MGP_WSBEiJ_T0075878.1 MGP_WSBEiJ_G0029781.1 mouse_genomes_project 6 38283601 38284825 + MGP_WSBEiJ_P0075878 Wee2 protein_coding protein_coding MGP_WSBEiJ_T0079452.1 MGP_WSBEiJ_G0030604.1 mouse_genomes_project 6 141477993 141560201 - Slc15a5 protein_coding retained_intron MGP_WSBEiJ_T0079453.1 MGP_WSBEiJ_G0030604.1 mouse_genomes_project 6 141477993 141569298 - MGP_WSBEiJ_P0079453 Slc15a5 protein_coding protein_coding MGP_WSBEiJ_T0079454.1 MGP_WSBEiJ_G0030604.1 mouse_genomes_project 6 141478715 141559910 - MGP_WSBEiJ_P0079454 Slc15a5 protein_coding protein_coding MGP_WSBEiJ_T0079455.1 MGP_WSBEiJ_G0030604.1 mouse_genomes_project 6 141512863 141525783 - MGP_WSBEiJ_P0079455 Slc15a5 protein_coding protein_coding MGP_WSBEiJ_T0079456.1 MGP_WSBEiJ_G0030604.1 mouse_genomes_project 6 141522184 141532551 - MGP_WSBEiJ_P0079456 Slc15a5 protein_coding protein_coding MGP_WSBEiJ_T0079457.1 MGP_WSBEiJ_G0030604.1 mouse_genomes_project 6 141525956 141548973 - Slc15a5 protein_coding retained_intron MGP_WSBEiJ_T0078547.1 MGP_WSBEiJ_G0030378.1 mouse_genomes_project 6 122450676 122475215 + MGP_WSBEiJ_P0078547 Slc25a18 protein_coding protein_coding MGP_WSBEiJ_T0079237.1 MGP_WSBEiJ_G0030541.1 mouse_genomes_project 6 135027424 135030729 - MGP_WSBEiJ_P0079237 protein_coding protein_coding MGP_WSBEiJ_T0078452.1 MGP_WSBEiJ_G0030365.1 mouse_genomes_project 6 121070961 121073876 + MGP_WSBEiJ_P0078452 Fbxl14 protein_coding protein_coding MGP_WSBEiJ_T0002077.1 MGP_WSBEiJ_G0001997.1 mouse_genomes_project 6 114875811 114878924 + TEC TEC MGP_WSBEiJ_T0079603.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146690518 146782291 - MGP_WSBEiJ_P0079603 C2cd5 protein_coding protein_coding MGP_WSBEiJ_T0079604.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146690518 146782291 - MGP_WSBEiJ_P0079604 C2cd5 protein_coding protein_coding MGP_WSBEiJ_T0079605.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146690523 146782274 - MGP_WSBEiJ_P0079605 C2cd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079606.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146690526 146781944 - MGP_WSBEiJ_P0079606 C2cd5 protein_coding protein_coding MGP_WSBEiJ_T0079607.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146691080 146781935 - MGP_WSBEiJ_P0079607 C2cd5 protein_coding protein_coding MGP_WSBEiJ_T0079608.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146691331 146782255 - MGP_WSBEiJ_P0079608 C2cd5 protein_coding protein_coding MGP_WSBEiJ_T0079609.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146691337 146693336 - C2cd5 protein_coding retained_intron MGP_WSBEiJ_T0079610.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146691535 146782189 - MGP_WSBEiJ_P0079610 C2cd5 protein_coding protein_coding MGP_WSBEiJ_T0079611.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146696693 146701215 - C2cd5 protein_coding retained_intron MGP_WSBEiJ_T0079612.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146707826 146782291 - C2cd5 protein_coding retained_intron MGP_WSBEiJ_T0079613.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146722665 146747790 - MGP_WSBEiJ_P0079613 C2cd5 protein_coding protein_coding MGP_WSBEiJ_T0079614.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146728082 146731497 - C2cd5 protein_coding retained_intron MGP_WSBEiJ_T0079615.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146751194 146782017 - C2cd5 protein_coding retained_intron MGP_WSBEiJ_T0079616.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146754518 146763266 - C2cd5 protein_coding processed_transcript MGP_WSBEiJ_T0079617.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146759794 146761763 - C2cd5 protein_coding retained_intron MGP_WSBEiJ_T0079618.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146760161 146782325 - MGP_WSBEiJ_P0079618 C2cd5 protein_coding protein_coding MGP_WSBEiJ_T0079619.1 MGP_WSBEiJ_G0030637.1 mouse_genomes_project 6 146764906 146782262 - C2cd5 protein_coding retained_intron MGP_WSBEiJ_T0078437.1 MGP_WSBEiJ_G0030362.1 mouse_genomes_project 6 120888306 120905108 - MGP_WSBEiJ_P0078437 Lrtm2 protein_coding protein_coding MGP_WSBEiJ_T0078438.1 MGP_WSBEiJ_G0030362.1 mouse_genomes_project 6 120888306 120903547 - MGP_WSBEiJ_P0078438 Lrtm2 protein_coding protein_coding MGP_WSBEiJ_T0078439.1 MGP_WSBEiJ_G0030362.1 mouse_genomes_project 6 120888306 120905099 - MGP_WSBEiJ_P0078439 Lrtm2 protein_coding protein_coding MGP_WSBEiJ_T0078440.1 MGP_WSBEiJ_G0030362.1 mouse_genomes_project 6 120896837 120903547 - MGP_WSBEiJ_P0078440 Lrtm2 protein_coding protein_coding MGP_WSBEiJ_T0000160.1 MGP_WSBEiJ_G0000122.1 mouse_genomes_project 6 68082191 68082677 + MGP_WSBEiJ_P0000160 Igkv15-103 IG_V_gene IG_V_gene MGP_WSBEiJ_T0078874.1 MGP_WSBEiJ_G0030448.1 mouse_genomes_project 6 127123061 127151081 + protein_coding retained_intron MGP_WSBEiJ_T0078875.1 MGP_WSBEiJ_G0030448.1 mouse_genomes_project 6 127123193 127146828 + protein_coding processed_transcript MGP_WSBEiJ_T0078876.1 MGP_WSBEiJ_G0030448.1 mouse_genomes_project 6 127124506 127153338 + MGP_WSBEiJ_P0078876 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078877.1 MGP_WSBEiJ_G0030448.1 mouse_genomes_project 6 127124513 127139532 + protein_coding processed_transcript MGP_WSBEiJ_T0078878.1 MGP_WSBEiJ_G0030448.1 mouse_genomes_project 6 127124515 127139678 + MGP_WSBEiJ_P0078878 protein_coding protein_coding MGP_WSBEiJ_T0078879.1 MGP_WSBEiJ_G0030448.1 mouse_genomes_project 6 127124545 127147711 + protein_coding retained_intron MGP_WSBEiJ_T0078880.1 MGP_WSBEiJ_G0030448.1 mouse_genomes_project 6 127139551 127147707 + protein_coding retained_intron MGP_WSBEiJ_T0078130.1 MGP_WSBEiJ_G0030307.1 mouse_genomes_project 6 115196728 115200471 - MGP_WSBEiJ_P0078130 Ghrl protein_coding protein_coding MGP_WSBEiJ_T0078131.1 MGP_WSBEiJ_G0030307.1 mouse_genomes_project 6 115196728 115198301 - MGP_WSBEiJ_P0078131 Ghrl protein_coding protein_coding MGP_WSBEiJ_T0078132.1 MGP_WSBEiJ_G0030307.1 mouse_genomes_project 6 115196733 115200040 - MGP_WSBEiJ_P0078132 Ghrl protein_coding protein_coding MGP_WSBEiJ_T0078133.1 MGP_WSBEiJ_G0030307.1 mouse_genomes_project 6 115196741 115200439 - MGP_WSBEiJ_P0078133 Ghrl protein_coding protein_coding MGP_WSBEiJ_T0078134.1 MGP_WSBEiJ_G0030307.1 mouse_genomes_project 6 115196781 115200029 - MGP_WSBEiJ_P0078134 Ghrl protein_coding protein_coding MGP_WSBEiJ_T0078135.1 MGP_WSBEiJ_G0030307.1 mouse_genomes_project 6 115196859 115200011 - MGP_WSBEiJ_P0078135 Ghrl protein_coding protein_coding MGP_WSBEiJ_T0078136.1 MGP_WSBEiJ_G0030307.1 mouse_genomes_project 6 115199758 115200036 - Ghrl protein_coding retained_intron MGP_WSBEiJ_T0075630.1 MGP_WSBEiJ_G0029732.1 mouse_genomes_project 6 31920159 31937826 + MGP_WSBEiJ_P0075630 protein_coding protein_coding MGP_WSBEiJ_T0075631.1 MGP_WSBEiJ_G0029732.1 mouse_genomes_project 6 31920190 31926315 + protein_coding retained_intron MGP_WSBEiJ_T0075632.1 MGP_WSBEiJ_G0029732.1 mouse_genomes_project 6 31920222 31937823 + MGP_WSBEiJ_P0075632 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075633.1 MGP_WSBEiJ_G0029732.1 mouse_genomes_project 6 31920222 31937624 + MGP_WSBEiJ_P0075633 protein_coding protein_coding MGP_WSBEiJ_T0075634.1 MGP_WSBEiJ_G0029732.1 mouse_genomes_project 6 31926334 31927302 + protein_coding retained_intron MGP_WSBEiJ_T0075635.1 MGP_WSBEiJ_G0029732.1 mouse_genomes_project 6 31928174 31932587 + protein_coding retained_intron MGP_WSBEiJ_T0075636.1 MGP_WSBEiJ_G0029732.1 mouse_genomes_project 6 31928982 31937530 + MGP_WSBEiJ_P0075636 protein_coding unknown_likely_coding MGP_WSBEiJ_T0075911.1 MGP_WSBEiJ_G0029797.1 mouse_genomes_project 6 38891906 38897148 - MGP_WSBEiJ_P0075911 2210010C04Rik protein_coding protein_coding MGP_WSBEiJ_T0079476.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143170881 143207980 + MGP_WSBEiJ_P0079476 Pik3c2g protein_coding protein_coding MGP_WSBEiJ_T0079477.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143170897 143221939 + MGP_WSBEiJ_P0079477 Pik3c2g protein_coding protein_coding MGP_WSBEiJ_T0079478.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143183035 143222046 + MGP_WSBEiJ_P0079478 Pik3c2g protein_coding protein_coding MGP_WSBEiJ_T0079479.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143183038 143245307 + Pik3c2g protein_coding processed_transcript MGP_WSBEiJ_T0079480.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143198008 143245307 + MGP_WSBEiJ_P0079480 Pik3c2g protein_coding protein_coding MGP_WSBEiJ_T0079481.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143200180 143531487 + MGP_WSBEiJ_P0079481 Pik3c2g protein_coding unknown_likely_coding MGP_WSBEiJ_T0079482.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143207380 143221712 + MGP_WSBEiJ_P0079482 Pik3c2g protein_coding protein_coding MGP_WSBEiJ_T0079483.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143270332 143403041 + Pik3c2g protein_coding processed_transcript MGP_WSBEiJ_T0079484.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143270332 143531481 + MGP_WSBEiJ_P0079484 Pik3c2g protein_coding protein_coding MGP_WSBEiJ_T0079485.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143330220 143398037 + Pik3c2g protein_coding retained_intron MGP_WSBEiJ_T0079486.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143393169 143531481 + Pik3c2g protein_coding processed_transcript MGP_WSBEiJ_T0079487.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143393227 143413849 + Pik3c2g protein_coding processed_transcript MGP_WSBEiJ_T0079488.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143393305 143456033 + Pik3c2g protein_coding processed_transcript MGP_WSBEiJ_T0079490.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143395169 143531481 + MGP_WSBEiJ_P0079490 Pik3c2g protein_coding protein_coding MGP_WSBEiJ_T0079491.1 MGP_WSBEiJ_G0030609.1 mouse_genomes_project 6 143476208 143504255 + Pik3c2g protein_coding processed_transcript MGP_WSBEiJ_T0098441.1 MGP_WSBEiJ_G0037104.1 mouse_genomes_project 6 114476607 114476699 - Gm23244 snRNA snRNA MGP_WSBEiJ_T0099684.1 MGP_WSBEiJ_G0038347.1 mouse_genomes_project 6 125953422 125953529 + Gm22763 snoRNA snoRNA MGP_WSBEiJ_T0014778.1 MGP_WSBEiJ_G0012908.1 mouse_genomes_project 6 1093973 1094295 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008501.1 MGP_WSBEiJ_G0006880.1 mouse_genomes_project 6 79154039 79154359 - Gm29005 lincRNA lincRNA MGP_WSBEiJ_T0014831.1 MGP_WSBEiJ_G0012961.1 mouse_genomes_project 6 25647672 25648924 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099657.1 MGP_WSBEiJ_G0038320.1 mouse_genomes_project 6 67474669 67474807 + Gm24911 snoRNA snoRNA MGP_WSBEiJ_T0002674.1 MGP_WSBEiJ_G0002558.1 mouse_genomes_project 6 39080358 39080649 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0076079.1 MGP_WSBEiJ_G0029858.1 mouse_genomes_project 6 46006685 46025499 - MGP_WSBEiJ_P0076079 Pdia4 protein_coding protein_coding MGP_WSBEiJ_T0076080.1 MGP_WSBEiJ_G0029858.1 mouse_genomes_project 6 46017469 46025433 - Pdia4 protein_coding processed_transcript MGP_WSBEiJ_T0079687.1 MGP_WSBEiJ_G0030646.1 mouse_genomes_project 6 149402632 149408408 + MGP_WSBEiJ_P0079687 Tuba3b protein_coding protein_coding MGP_WSBEiJ_T0100309.1 MGP_WSBEiJ_G0038808.1 mouse_genomes_project 6 133228728 133688695 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0008579.1 MGP_WSBEiJ_G0006940.1 mouse_genomes_project 6 119795211 119797563 + Gm30557 lincRNA lincRNA MGP_WSBEiJ_T0079165.1 MGP_WSBEiJ_G0030515.1 mouse_genomes_project 6 131968942 131985263 + MGP_WSBEiJ_P0079165 Clec9a protein_coding protein_coding MGP_WSBEiJ_T0079166.1 MGP_WSBEiJ_G0030515.1 mouse_genomes_project 6 131968943 131983069 + MGP_WSBEiJ_P0079166 Clec9a protein_coding protein_coding MGP_WSBEiJ_T0079167.1 MGP_WSBEiJ_G0030515.1 mouse_genomes_project 6 131969035 131982858 + MGP_WSBEiJ_P0079167 Clec9a protein_coding protein_coding MGP_WSBEiJ_T0079168.1 MGP_WSBEiJ_G0030515.1 mouse_genomes_project 6 131969035 131982858 + MGP_WSBEiJ_P0079168 Clec9a protein_coding protein_coding MGP_WSBEiJ_T0015177.1 MGP_WSBEiJ_G0013307.1 mouse_genomes_project 6 143627786 143628199 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001954.1 MGP_WSBEiJ_G0001874.1 mouse_genomes_project 6 56452781 56455619 - TEC TEC MGP_WSBEiJ_T0075951.1 MGP_WSBEiJ_G0029819.1 mouse_genomes_project 6 40202688 40207308 + MGP_WSBEiJ_P0075951 Gstk1 protein_coding protein_coding MGP_WSBEiJ_T0075952.1 MGP_WSBEiJ_G0029819.1 mouse_genomes_project 6 40202732 40207308 + MGP_WSBEiJ_P0075952 Gstk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075953.1 MGP_WSBEiJ_G0029819.1 mouse_genomes_project 6 40202742 40207314 + Gstk1 protein_coding retained_intron MGP_WSBEiJ_T0075954.1 MGP_WSBEiJ_G0029819.1 mouse_genomes_project 6 40202776 40207186 + Gstk1 protein_coding processed_transcript MGP_WSBEiJ_T0002452.1 MGP_WSBEiJ_G0002366.1 mouse_genomes_project 6 39431144 39431159 + MGP_WSBEiJ_P0002452 Trbd2 TR_D_gene TR_D_gene MGP_WSBEiJ_T0078430.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120805779 120928077 + MGP_WSBEiJ_P0078430 Cacna2d4 protein_coding protein_coding MGP_WSBEiJ_T0078431.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120805780 120847575 + Cacna2d4 protein_coding retained_intron MGP_WSBEiJ_T0078432.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120805848 120926128 + MGP_WSBEiJ_P0078432 Cacna2d4 protein_coding protein_coding MGP_WSBEiJ_T0078433.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120819443 120874594 + Cacna2d4 protein_coding processed_transcript MGP_WSBEiJ_T0078434.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120820644 120842417 + Cacna2d4 protein_coding processed_transcript MGP_WSBEiJ_T0078435.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120838002 120841715 + Cacna2d4 protein_coding processed_transcript MGP_WSBEiJ_T0078436.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120838203 120841758 + Cacna2d4 protein_coding retained_intron MGP_WSBEiJ_T0078441.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120905110 120919731 + Cacna2d4 protein_coding processed_transcript MGP_WSBEiJ_T0078442.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120905143 120913977 + Cacna2d4 protein_coding retained_intron MGP_WSBEiJ_T0078443.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120906771 120922927 + Cacna2d4 protein_coding processed_transcript MGP_WSBEiJ_T0078444.1 MGP_WSBEiJ_G0030361.1 mouse_genomes_project 6 120909138 120928085 + MGP_WSBEiJ_P0078444 Cacna2d4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0014872.1 MGP_WSBEiJ_G0013002.1 mouse_genomes_project 6 46618472 46619343 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010613.1 MGP_WSBEiJ_G0008770.1 mouse_genomes_project 6 95602149 95602201 - Mir7041 miRNA miRNA MGP_WSBEiJ_T0076339.1 MGP_WSBEiJ_G0029924.1 mouse_genomes_project 6 50745616 50750267 - MGP_WSBEiJ_P0076339 Hoxa13 protein_coding protein_coding MGP_WSBEiJ_T0076340.1 MGP_WSBEiJ_G0029924.1 mouse_genomes_project 6 50746775 50750344 - MGP_WSBEiJ_P0076340 Hoxa13 protein_coding protein_coding MGP_WSBEiJ_T0076341.1 MGP_WSBEiJ_G0029924.1 mouse_genomes_project 6 50746793 50750266 - Hoxa13 protein_coding processed_transcript MGP_WSBEiJ_T0076342.1 MGP_WSBEiJ_G0029924.1 mouse_genomes_project 6 50746793 50750266 - Hoxa13 protein_coding processed_transcript MGP_WSBEiJ_T0076343.1 MGP_WSBEiJ_G0029924.1 mouse_genomes_project 6 50746793 50750266 - Hoxa13 protein_coding processed_transcript MGP_WSBEiJ_T0076344.1 MGP_WSBEiJ_G0029924.1 mouse_genomes_project 6 50746793 50750266 - MGP_WSBEiJ_P0076344 Hoxa13 protein_coding protein_coding MGP_WSBEiJ_T0008535.1 MGP_WSBEiJ_G0006903.1 mouse_genomes_project 6 91271227 91272985 - Gm44117 lincRNA lincRNA MGP_WSBEiJ_T0077428.1 MGP_WSBEiJ_G0030169.1 mouse_genomes_project 6 88522206 88546975 - MGP_WSBEiJ_P0077428 Isy1 protein_coding protein_coding MGP_WSBEiJ_T0077429.1 MGP_WSBEiJ_G0030169.1 mouse_genomes_project 6 88530097 88546915 - MGP_WSBEiJ_P0077429 Isy1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077430.1 MGP_WSBEiJ_G0030169.1 mouse_genomes_project 6 88530167 88531144 - Isy1 protein_coding retained_intron MGP_WSBEiJ_T0077431.1 MGP_WSBEiJ_G0030169.1 mouse_genomes_project 6 88530981 88546877 - MGP_WSBEiJ_P0077431 Isy1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077432.1 MGP_WSBEiJ_G0030169.1 mouse_genomes_project 6 88533844 88546933 - Isy1 protein_coding retained_intron MGP_WSBEiJ_T0077433.1 MGP_WSBEiJ_G0030169.1 mouse_genomes_project 6 88535630 88546890 - Isy1 protein_coding retained_intron MGP_WSBEiJ_T0077434.1 MGP_WSBEiJ_G0030169.1 mouse_genomes_project 6 88536233 88546924 - MGP_WSBEiJ_P0077434 Isy1 protein_coding protein_coding MGP_WSBEiJ_T0077435.1 MGP_WSBEiJ_G0030169.1 mouse_genomes_project 6 88541701 88546933 - Isy1 protein_coding retained_intron MGP_WSBEiJ_T0079532.1 MGP_WSBEiJ_G0030618.1 mouse_genomes_project 6 145287609 145350751 + MGP_WSBEiJ_P0079532 Slco1b2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0079533.1 MGP_WSBEiJ_G0030618.1 mouse_genomes_project 6 145294580 145350751 + MGP_WSBEiJ_P0079533 Slco1b2 protein_coding protein_coding MGP_WSBEiJ_T0079534.1 MGP_WSBEiJ_G0030618.1 mouse_genomes_project 6 145317148 145322472 + Slco1b2 protein_coding retained_intron MGP_WSBEiJ_T0079535.1 MGP_WSBEiJ_G0030618.1 mouse_genomes_project 6 145346406 145350754 + Slco1b2 protein_coding retained_intron MGP_WSBEiJ_T0079278.1 MGP_WSBEiJ_G0030568.1 mouse_genomes_project 6 137685932 137812661 - MGP_WSBEiJ_P0079278 Lrp6 protein_coding protein_coding MGP_WSBEiJ_T0079279.1 MGP_WSBEiJ_G0030568.1 mouse_genomes_project 6 137689929 137713256 - Lrp6 protein_coding retained_intron MGP_WSBEiJ_T0079280.1 MGP_WSBEiJ_G0030568.1 mouse_genomes_project 6 137701663 137706970 - Lrp6 protein_coding retained_intron MGP_WSBEiJ_T0079281.1 MGP_WSBEiJ_G0030568.1 mouse_genomes_project 6 137703392 137709719 - Lrp6 protein_coding retained_intron MGP_WSBEiJ_T0079282.1 MGP_WSBEiJ_G0030568.1 mouse_genomes_project 6 137755104 137812713 - MGP_WSBEiJ_P0079282 Lrp6 protein_coding protein_coding MGP_WSBEiJ_T0079283.1 MGP_WSBEiJ_G0030568.1 mouse_genomes_project 6 137785199 137786157 - Lrp6 protein_coding retained_intron MGP_WSBEiJ_T0076323.1 MGP_WSBEiJ_G0029920.1 mouse_genomes_project 6 50701594 50707482 - MGP_WSBEiJ_P0076323 Hoxa7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076324.1 MGP_WSBEiJ_G0029920.1 mouse_genomes_project 6 50701601 50704594 - MGP_WSBEiJ_P0076324 Hoxa7 protein_coding protein_coding MGP_WSBEiJ_T0076325.1 MGP_WSBEiJ_G0029920.1 mouse_genomes_project 6 50702842 50705800 - MGP_WSBEiJ_P0076325 Hoxa7 protein_coding protein_coding MGP_WSBEiJ_T0076326.1 MGP_WSBEiJ_G0029920.1 mouse_genomes_project 6 50703098 50708945 - MGP_WSBEiJ_P0076326 Hoxa7 protein_coding protein_coding MGP_WSBEiJ_T0076327.1 MGP_WSBEiJ_G0029920.1 mouse_genomes_project 6 50703529 50704541 - MGP_WSBEiJ_P0076327 Hoxa7 protein_coding protein_coding MGP_WSBEiJ_T0075549.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28155577 28175091 + MGP_WSBEiJ_P0075549 Mest protein_coding protein_coding MGP_WSBEiJ_T0075550.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28155577 28164490 + MGP_WSBEiJ_P0075550 Mest protein_coding protein_coding MGP_WSBEiJ_T0075551.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28163742 28175095 + MGP_WSBEiJ_P0075551 Mest protein_coding protein_coding MGP_WSBEiJ_T0075552.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28165229 28175353 + MGP_WSBEiJ_P0075552 Mest protein_coding protein_coding MGP_WSBEiJ_T0075553.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28165281 28180981 + MGP_WSBEiJ_P0075553 Mest protein_coding protein_coding MGP_WSBEiJ_T0075554.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28170653 28180981 + MGP_WSBEiJ_P0075554 Mest protein_coding protein_coding MGP_WSBEiJ_T0075555.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28170656 28180984 + MGP_WSBEiJ_P0075555 Mest protein_coding protein_coding MGP_WSBEiJ_T0075556.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28170658 28171482 + Mest protein_coding processed_transcript MGP_WSBEiJ_T0075557.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28173298 28175659 + Mest protein_coding retained_intron MGP_WSBEiJ_T0075558.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28174592 28175657 + Mest protein_coding retained_intron MGP_WSBEiJ_T0075559.1 MGP_WSBEiJ_G0029718.1 mouse_genomes_project 6 28174605 28175667 + Mest protein_coding retained_intron MGP_WSBEiJ_T0076328.1 MGP_WSBEiJ_G0029921.1 mouse_genomes_project 6 50710175 50714441 - MGP_WSBEiJ_P0076328 Hoxa9 protein_coding protein_coding MGP_WSBEiJ_T0076329.1 MGP_WSBEiJ_G0029921.1 mouse_genomes_project 6 50711037 50718175 - Hoxa9 protein_coding processed_transcript MGP_WSBEiJ_T0076330.1 MGP_WSBEiJ_G0029921.1 mouse_genomes_project 6 50711194 50713259 - MGP_WSBEiJ_P0076330 Hoxa9 protein_coding protein_coding MGP_WSBEiJ_T0076331.1 MGP_WSBEiJ_G0029921.1 mouse_genomes_project 6 50711396 50717370 - Hoxa9 protein_coding processed_transcript MGP_WSBEiJ_T0076332.1 MGP_WSBEiJ_G0029921.1 mouse_genomes_project 6 50715337 50717619 - Hoxa9 protein_coding retained_intron MGP_WSBEiJ_T0015138.1 MGP_WSBEiJ_G0013268.1 mouse_genomes_project 6 131065167 131065324 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001967.1 MGP_WSBEiJ_G0001887.1 mouse_genomes_project 6 71752889 71753515 - TEC TEC MGP_WSBEiJ_T0078512.1 MGP_WSBEiJ_G0030371.1 mouse_genomes_project 6 121946746 121947814 + MGP_WSBEiJ_P0078512 D330020A13Rik protein_coding protein_coding MGP_WSBEiJ_T0008636.1 MGP_WSBEiJ_G0006982.1 mouse_genomes_project 6 150460494 150468695 + 4930479D17Rik lincRNA lincRNA MGP_WSBEiJ_T0075299.1 MGP_WSBEiJ_G0029677.1 mouse_genomes_project 6 22881241 22908183 - MGP_WSBEiJ_P0075299 Gpr37 protein_coding protein_coding MGP_WSBEiJ_T0075300.1 MGP_WSBEiJ_G0029677.1 mouse_genomes_project 6 22885897 22909120 - MGP_WSBEiJ_P0075300 Gpr37 protein_coding protein_coding MGP_WSBEiJ_T0078403.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120127476 120765605 - MGP_WSBEiJ_P0078403 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078404.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120132505 120135638 - Cacna1c protein_coding processed_transcript MGP_WSBEiJ_T0078405.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120132520 120302383 - Cacna1c protein_coding processed_transcript MGP_WSBEiJ_T0078406.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120132665 120664314 - MGP_WSBEiJ_P0078406 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078407.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133144 120664314 - MGP_WSBEiJ_P0078407 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078408.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133144 120664361 - MGP_WSBEiJ_P0078408 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078409.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133284 120765792 - MGP_WSBEiJ_P0078409 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078410.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133848 120664686 - MGP_WSBEiJ_P0078410 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078411.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133848 120765761 - MGP_WSBEiJ_P0078411 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078412.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133995 120664100 - MGP_WSBEiJ_P0078412 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078413.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133995 120664100 - MGP_WSBEiJ_P0078413 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078414.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133995 120664100 - MGP_WSBEiJ_P0078414 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078415.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133995 120664100 - MGP_WSBEiJ_P0078415 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078416.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133995 120664100 - MGP_WSBEiJ_P0078416 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078417.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120133995 120664100 - MGP_WSBEiJ_P0078417 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078418.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120134001 120635771 - MGP_WSBEiJ_P0078418 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078419.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120134094 120664100 - MGP_WSBEiJ_P0078419 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078420.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120134094 120664100 - MGP_WSBEiJ_P0078420 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078421.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120134094 120765605 - MGP_WSBEiJ_P0078421 Cacna1c protein_coding protein_coding MGP_WSBEiJ_T0078422.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120155588 120170099 - Cacna1c protein_coding processed_transcript MGP_WSBEiJ_T0078423.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120246568 120251528 - Cacna1c protein_coding retained_intron MGP_WSBEiJ_T0078424.1 MGP_WSBEiJ_G0030359.1 mouse_genomes_project 6 120496336 120765783 - Cacna1c protein_coding processed_transcript MGP_WSBEiJ_T0002032.1 MGP_WSBEiJ_G0001952.1 mouse_genomes_project 6 89662905 89665812 + TEC TEC MGP_WSBEiJ_T0014988.1 MGP_WSBEiJ_G0013118.1 mouse_genomes_project 6 78720260 78720756 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008565.1 MGP_WSBEiJ_G0006928.1 mouse_genomes_project 6 114380290 114382584 + Gm44081 lincRNA lincRNA MGP_WSBEiJ_T0075187.1 MGP_WSBEiJ_G0029648.1 mouse_genomes_project 6 15039716 15098547 - MGP_WSBEiJ_P0075187 Asz1 protein_coding protein_coding MGP_WSBEiJ_T0075188.1 MGP_WSBEiJ_G0029648.1 mouse_genomes_project 6 15039735 15098534 - Asz1 protein_coding retained_intron MGP_WSBEiJ_T0075189.1 MGP_WSBEiJ_G0029648.1 mouse_genomes_project 6 15061833 15063137 - Asz1 protein_coding retained_intron MGP_WSBEiJ_T0075190.1 MGP_WSBEiJ_G0029648.1 mouse_genomes_project 6 15063805 15098535 - MGP_WSBEiJ_P0075190 Asz1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075191.1 MGP_WSBEiJ_G0029648.1 mouse_genomes_project 6 15065092 15098551 - Asz1 protein_coding processed_transcript MGP_WSBEiJ_T0014918.1 MGP_WSBEiJ_G0013048.1 mouse_genomes_project 6 61550033 61550342 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077399.1 MGP_WSBEiJ_G0030159.1 mouse_genomes_project 6 88064885 88071026 + MGP_WSBEiJ_P0077399 Gkn2 protein_coding protein_coding MGP_WSBEiJ_T0002625.1 MGP_WSBEiJ_G0002515.1 mouse_genomes_project 6 39045419 39046091 + MGP_WSBEiJ_P0002625 Trbv19 TR_V_gene TR_V_gene MGP_WSBEiJ_T0076689.1 MGP_WSBEiJ_G0030019.1 mouse_genomes_project 6 70601727 70631922 - MGP_WSBEiJ_P0076689 Rpia protein_coding protein_coding MGP_WSBEiJ_T0076690.1 MGP_WSBEiJ_G0030019.1 mouse_genomes_project 6 70602280 70610634 - Rpia protein_coding retained_intron MGP_WSBEiJ_T0076691.1 MGP_WSBEiJ_G0030019.1 mouse_genomes_project 6 70620001 70631693 - Rpia protein_coding retained_intron MGP_WSBEiJ_T0078730.1 MGP_WSBEiJ_G0030423.1 mouse_genomes_project 6 126694477 126729741 - MGP_WSBEiJ_P0078730 protein_coding protein_coding MGP_WSBEiJ_T0078731.1 MGP_WSBEiJ_G0030423.1 mouse_genomes_project 6 126694480 126729742 - MGP_WSBEiJ_P0078731 protein_coding protein_coding MGP_WSBEiJ_T0078734.1 MGP_WSBEiJ_G0030423.1 mouse_genomes_project 6 126723660 126727842 - protein_coding retained_intron MGP_WSBEiJ_T0078735.1 MGP_WSBEiJ_G0030423.1 mouse_genomes_project 6 126727785 126729723 - MGP_WSBEiJ_P0078735 protein_coding protein_coding MGP_WSBEiJ_T0078736.1 MGP_WSBEiJ_G0030423.1 mouse_genomes_project 6 126728402 126729729 - MGP_WSBEiJ_P0078736 protein_coding protein_coding MGP_WSBEiJ_T0008466.1 MGP_WSBEiJ_G0006850.1 mouse_genomes_project 6 50578714 50589094 + Halr1 lincRNA lincRNA MGP_WSBEiJ_T0008467.1 MGP_WSBEiJ_G0006850.1 mouse_genomes_project 6 50578759 50590246 + Halr1 lincRNA lincRNA MGP_WSBEiJ_T0008468.1 MGP_WSBEiJ_G0006850.1 mouse_genomes_project 6 50578768 50588754 + Halr1 lincRNA lincRNA MGP_WSBEiJ_T0014920.1 MGP_WSBEiJ_G0013050.1 mouse_genomes_project 6 61845698 61846830 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097447.1 MGP_WSBEiJ_G0036117.1 mouse_genomes_project 6 115078245 115082298 + Gm44200 sense_intronic sense_intronic MGP_WSBEiJ_T0077409.1 MGP_WSBEiJ_G0030164.1 mouse_genomes_project 6 88329185 88375644 - MGP_WSBEiJ_P0077409 Aplf protein_coding protein_coding MGP_WSBEiJ_T0077410.1 MGP_WSBEiJ_G0030164.1 mouse_genomes_project 6 88330315 88375561 - MGP_WSBEiJ_P0077410 Aplf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077411.1 MGP_WSBEiJ_G0030164.1 mouse_genomes_project 6 88330320 88375690 - MGP_WSBEiJ_P0077411 Aplf protein_coding protein_coding MGP_WSBEiJ_T0077412.1 MGP_WSBEiJ_G0030164.1 mouse_genomes_project 6 88351661 88375626 - Aplf protein_coding retained_intron MGP_WSBEiJ_T0001918.1 MGP_WSBEiJ_G0001838.1 mouse_genomes_project 6 43096543 43097772 + TEC TEC MGP_WSBEiJ_T0077064.1 MGP_WSBEiJ_G0030097.1 mouse_genomes_project 6 83691075 83703012 - MGP_WSBEiJ_P0077064 Mthfd2 protein_coding protein_coding MGP_WSBEiJ_T0077065.1 MGP_WSBEiJ_G0030097.1 mouse_genomes_project 6 83691786 83702959 - MGP_WSBEiJ_P0077065 Mthfd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077066.1 MGP_WSBEiJ_G0030097.1 mouse_genomes_project 6 83691942 83694700 - Mthfd2 protein_coding retained_intron MGP_WSBEiJ_T0077067.1 MGP_WSBEiJ_G0030097.1 mouse_genomes_project 6 83694726 83695949 - Mthfd2 protein_coding retained_intron MGP_WSBEiJ_T0077068.1 MGP_WSBEiJ_G0030097.1 mouse_genomes_project 6 83694944 83697000 - Mthfd2 protein_coding retained_intron MGP_WSBEiJ_T0077069.1 MGP_WSBEiJ_G0030097.1 mouse_genomes_project 6 83696751 83697810 - Mthfd2 protein_coding retained_intron MGP_WSBEiJ_T0077070.1 MGP_WSBEiJ_G0030097.1 mouse_genomes_project 6 83697275 83713398 - MGP_WSBEiJ_P0077070 Mthfd2 protein_coding protein_coding MGP_WSBEiJ_T0008576.1 MGP_WSBEiJ_G0006937.1 mouse_genomes_project 6 119158309 119209648 - lincRNA lincRNA MGP_WSBEiJ_T0017677.1 MGP_WSBEiJ_G0015054.1 mouse_genomes_project 6 52839283 53009013 - 9130019P16Rik processed_transcript antisense MGP_WSBEiJ_T0017678.1 MGP_WSBEiJ_G0015054.1 mouse_genomes_project 6 52872686 52898816 - 9130019P16Rik processed_transcript lincRNA MGP_WSBEiJ_T0017679.1 MGP_WSBEiJ_G0015054.1 mouse_genomes_project 6 53002393 53008347 - 9130019P16Rik processed_transcript lincRNA MGP_WSBEiJ_T0008482.1 MGP_WSBEiJ_G0006862.1 mouse_genomes_project 6 59782863 59787289 + Gm35386 lincRNA lincRNA MGP_WSBEiJ_T0004861.1 MGP_WSBEiJ_G0004172.1 mouse_genomes_project 6 38809040 38809338 + Gm29588 antisense antisense MGP_WSBEiJ_T0015052.1 MGP_WSBEiJ_G0013182.1 mouse_genomes_project 6 104615949 104616385 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001894.1 MGP_WSBEiJ_G0001814.1 mouse_genomes_project 6 25491669 25495463 - TEC TEC MGP_WSBEiJ_T0078044.1 MGP_WSBEiJ_G0030290.1 mouse_genomes_project 6 114825781 114836807 - MGP_WSBEiJ_P0078044 Tada3 protein_coding protein_coding MGP_WSBEiJ_T0078045.1 MGP_WSBEiJ_G0030290.1 mouse_genomes_project 6 114826042 114830255 - Tada3 protein_coding retained_intron MGP_WSBEiJ_T0078046.1 MGP_WSBEiJ_G0030290.1 mouse_genomes_project 6 114826114 114837107 - MGP_WSBEiJ_P0078046 Tada3 protein_coding protein_coding MGP_WSBEiJ_T0078047.1 MGP_WSBEiJ_G0030290.1 mouse_genomes_project 6 114833676 114837029 - Tada3 protein_coding retained_intron MGP_WSBEiJ_T0078048.1 MGP_WSBEiJ_G0030290.1 mouse_genomes_project 6 114833772 114837029 - Tada3 protein_coding retained_intron MGP_WSBEiJ_T0078049.1 MGP_WSBEiJ_G0030290.1 mouse_genomes_project 6 114835293 114837046 - MGP_WSBEiJ_P0078049 Tada3 protein_coding protein_coding MGP_WSBEiJ_T0078709.1 MGP_WSBEiJ_G0030417.1 mouse_genomes_project 6 126334351 126360672 + MGP_WSBEiJ_P0078709 Cd163 protein_coding protein_coding MGP_WSBEiJ_T0078710.1 MGP_WSBEiJ_G0030417.1 mouse_genomes_project 6 126334395 126360672 + MGP_WSBEiJ_P0078710 Cd163 protein_coding protein_coding MGP_WSBEiJ_T0078711.1 MGP_WSBEiJ_G0030417.1 mouse_genomes_project 6 126350644 126360664 + Cd163 protein_coding retained_intron MGP_WSBEiJ_T0079235.1 MGP_WSBEiJ_G0030539.1 mouse_genomes_project 6 134635071 134636035 - MGP_WSBEiJ_P0079235 Tas2r105 protein_coding protein_coding MGP_WSBEiJ_T0075949.1 MGP_WSBEiJ_G0029817.1 mouse_genomes_project 6 40111841 40112801 + MGP_WSBEiJ_P0075949 Tas2r139 protein_coding protein_coding MGP_WSBEiJ_T0077585.1 MGP_WSBEiJ_G0030198.1 mouse_genomes_project 6 90833538 90834471 - MGP_WSBEiJ_P0077585 Vmn1r49 protein_coding protein_coding MGP_WSBEiJ_T0077586.1 MGP_WSBEiJ_G0030198.1 mouse_genomes_project 6 90833538 90839933 - MGP_WSBEiJ_P0077586 Vmn1r49 protein_coding protein_coding MGP_WSBEiJ_T0002519.1 MGP_WSBEiJ_G0002428.1 mouse_genomes_project 6 39423507 39423553 + MGP_WSBEiJ_P0002519 Trbj1-7 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002520.1 MGP_WSBEiJ_G0002428.1 mouse_genomes_project 6 39423507 39423552 + Trbj1-7 TR_J_gene processed_transcript MGP_WSBEiJ_T0076505.1 MGP_WSBEiJ_G0029960.1 mouse_genomes_project 6 55695522 55696580 + MGP_WSBEiJ_P0076505 Vmn1r6 protein_coding protein_coding MGP_WSBEiJ_T0100914.1 MGP_WSBEiJ_G0039372.1 mouse_genomes_project 6 60257610 60257875 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098428.1 MGP_WSBEiJ_G0037091.1 mouse_genomes_project 6 84129680 84129777 + Gm25054 snRNA snRNA MGP_WSBEiJ_T0014821.1 MGP_WSBEiJ_G0012951.1 mouse_genomes_project 6 19771932 19772708 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077235.1 MGP_WSBEiJ_G0030127.1 mouse_genomes_project 6 86132656 86377728 + MGP_WSBEiJ_P0077235 Alms1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0077236.1 MGP_WSBEiJ_G0030127.1 mouse_genomes_project 6 86132697 86253340 + MGP_WSBEiJ_P0077236 Alms1 protein_coding protein_coding MGP_WSBEiJ_T0077237.1 MGP_WSBEiJ_G0030127.1 mouse_genomes_project 6 86190598 86193327 + Alms1 protein_coding retained_intron MGP_WSBEiJ_T0077238.1 MGP_WSBEiJ_G0030127.1 mouse_genomes_project 6 86197864 86202662 + Alms1 protein_coding retained_intron MGP_WSBEiJ_T0077239.1 MGP_WSBEiJ_G0030127.1 mouse_genomes_project 6 86271333 86274557 + Alms1 protein_coding retained_intron MGP_WSBEiJ_T0078795.1 MGP_WSBEiJ_G0030434.1 mouse_genomes_project 6 126873299 126883568 - MGP_WSBEiJ_P0078795 Lrrc23 protein_coding protein_coding MGP_WSBEiJ_T0078796.1 MGP_WSBEiJ_G0030434.1 mouse_genomes_project 6 126873305 126883577 - MGP_WSBEiJ_P0078796 Lrrc23 protein_coding protein_coding MGP_WSBEiJ_T0078797.1 MGP_WSBEiJ_G0030434.1 mouse_genomes_project 6 126874034 126878462 - Lrrc23 protein_coding retained_intron MGP_WSBEiJ_T0078798.1 MGP_WSBEiJ_G0030434.1 mouse_genomes_project 6 126882111 126883567 - MGP_WSBEiJ_P0078798 Lrrc23 protein_coding protein_coding MGP_WSBEiJ_T0078799.1 MGP_WSBEiJ_G0030434.1 mouse_genomes_project 6 126882750 126883554 - MGP_WSBEiJ_P0078799 Lrrc23 protein_coding protein_coding MGP_WSBEiJ_T0011422.1 MGP_WSBEiJ_G0009579.1 mouse_genomes_project 6 5248363 5248675 + Gm24059 misc_RNA misc_RNA MGP_WSBEiJ_T0014852.1 MGP_WSBEiJ_G0012982.1 mouse_genomes_project 6 38887903 38888284 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078945.1 MGP_WSBEiJ_G0030459.1 mouse_genomes_project 6 127359732 127367652 - MGP_WSBEiJ_P0078945 Tapbpl protein_coding protein_coding MGP_WSBEiJ_T0098449.1 MGP_WSBEiJ_G0037112.1 mouse_genomes_project 6 131704754 131704817 + Gm26160 snRNA snRNA MGP_WSBEiJ_T0077855.1 MGP_WSBEiJ_G0030254.1 mouse_genomes_project 6 100872416 100874804 + MGP_WSBEiJ_P0077855 Gpr27 protein_coding protein_coding MGP_WSBEiJ_T0008590.1 MGP_WSBEiJ_G0006951.1 mouse_genomes_project 6 129495053 129498063 - Gm43635 lincRNA lincRNA MGP_WSBEiJ_T0014954.1 MGP_WSBEiJ_G0013084.1 mouse_genomes_project 6 66782301 66782638 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000295.1 MGP_WSBEiJ_G0000243.1 mouse_genomes_project 6 69670205 69670487 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0100302.1 MGP_WSBEiJ_G0038803.1 mouse_genomes_project 6 86296462 86378468 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100303.1 MGP_WSBEiJ_G0038803.1 mouse_genomes_project 6 86325481 86378468 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0076692.1 MGP_WSBEiJ_G0030020.1 mouse_genomes_project 6 70691910 70753081 + MGP_WSBEiJ_P0076692 Eif2ak3 protein_coding protein_coding MGP_WSBEiJ_T0076693.1 MGP_WSBEiJ_G0030020.1 mouse_genomes_project 6 70691948 70713271 + MGP_WSBEiJ_P0076693 Eif2ak3 protein_coding protein_coding MGP_WSBEiJ_T0076694.1 MGP_WSBEiJ_G0030020.1 mouse_genomes_project 6 70691951 70693038 + Eif2ak3 protein_coding retained_intron MGP_WSBEiJ_T0076695.1 MGP_WSBEiJ_G0030020.1 mouse_genomes_project 6 70727017 70741618 + Eif2ak3 protein_coding retained_intron MGP_WSBEiJ_T0076696.1 MGP_WSBEiJ_G0030020.1 mouse_genomes_project 6 70744943 70748998 + Eif2ak3 protein_coding retained_intron MGP_WSBEiJ_T0079346.1 MGP_WSBEiJ_G0030583.1 mouse_genomes_project 6 138664914 138686562 + MGP_WSBEiJ_P0079346 Emp1 protein_coding protein_coding MGP_WSBEiJ_T0079347.1 MGP_WSBEiJ_G0030583.1 mouse_genomes_project 6 138665311 138686562 + MGP_WSBEiJ_P0079347 Emp1 protein_coding protein_coding MGP_WSBEiJ_T0079348.1 MGP_WSBEiJ_G0030583.1 mouse_genomes_project 6 138665311 138686562 + MGP_WSBEiJ_P0079348 Emp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079349.1 MGP_WSBEiJ_G0030583.1 mouse_genomes_project 6 138665388 138683762 + Emp1 protein_coding retained_intron MGP_WSBEiJ_T0079350.1 MGP_WSBEiJ_G0030583.1 mouse_genomes_project 6 138665448 138668047 + Emp1 protein_coding retained_intron MGP_WSBEiJ_T0079351.1 MGP_WSBEiJ_G0030583.1 mouse_genomes_project 6 138669879 138686562 + MGP_WSBEiJ_P0079351 Emp1 protein_coding protein_coding MGP_WSBEiJ_T0014780.1 MGP_WSBEiJ_G0012910.1 mouse_genomes_project 6 1571065 1571237 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004887.1 MGP_WSBEiJ_G0004190.1 mouse_genomes_project 6 57963759 57971120 + Gm45060 antisense antisense MGP_WSBEiJ_T0004982.1 MGP_WSBEiJ_G0004247.1 mouse_genomes_project 6 114725108 114726203 - Gm16161 antisense antisense MGP_WSBEiJ_T0078983.1 MGP_WSBEiJ_G0030468.1 mouse_genomes_project 6 127855701 128149515 + Ano2 protein_coding retained_intron MGP_WSBEiJ_T0078984.1 MGP_WSBEiJ_G0030468.1 mouse_genomes_project 6 127855701 128234542 + MGP_WSBEiJ_P0078984 Ano2 protein_coding protein_coding MGP_WSBEiJ_T0078985.1 MGP_WSBEiJ_G0030468.1 mouse_genomes_project 6 127856010 128234575 + MGP_WSBEiJ_P0078985 Ano2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078986.1 MGP_WSBEiJ_G0030468.1 mouse_genomes_project 6 127878330 128234542 + MGP_WSBEiJ_P0078986 Ano2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078987.1 MGP_WSBEiJ_G0030468.1 mouse_genomes_project 6 127879180 127974233 + Ano2 protein_coding processed_transcript MGP_WSBEiJ_T0078988.1 MGP_WSBEiJ_G0030468.1 mouse_genomes_project 6 128000794 128091972 + Ano2 protein_coding processed_transcript MGP_WSBEiJ_T0078989.1 MGP_WSBEiJ_G0030468.1 mouse_genomes_project 6 128000795 128234540 + MGP_WSBEiJ_P0078989 Ano2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001965.1 MGP_WSBEiJ_G0001885.1 mouse_genomes_project 6 71708236 71711028 + TEC TEC MGP_WSBEiJ_T0076504.1 MGP_WSBEiJ_G0029959.1 mouse_genomes_project 6 55677697 55678753 + MGP_WSBEiJ_P0076504 Vmn1r5 protein_coding protein_coding MGP_WSBEiJ_T0014997.1 MGP_WSBEiJ_G0013127.1 mouse_genomes_project 6 84207120 84207498 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001961.1 MGP_WSBEiJ_G0001881.1 mouse_genomes_project 6 71153519 71156362 + TEC TEC MGP_WSBEiJ_T0100893.1 MGP_WSBEiJ_G0039351.1 mouse_genomes_project 6 40714536 40714600 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015111.1 MGP_WSBEiJ_G0013241.1 mouse_genomes_project 6 124442127 124442318 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076297.1 MGP_WSBEiJ_G0029910.1 mouse_genomes_project 6 49954232 50032026 + MGP_WSBEiJ_P0076297 Snx10 protein_coding protein_coding MGP_WSBEiJ_T0076298.1 MGP_WSBEiJ_G0029910.1 mouse_genomes_project 6 49954313 50009720 + Snx10 protein_coding retained_intron MGP_WSBEiJ_T0076299.1 MGP_WSBEiJ_G0029910.1 mouse_genomes_project 6 49954589 50020942 + MGP_WSBEiJ_P0076299 Snx10 protein_coding protein_coding MGP_WSBEiJ_T0076300.1 MGP_WSBEiJ_G0029910.1 mouse_genomes_project 6 49954614 50029783 + MGP_WSBEiJ_P0076300 Snx10 protein_coding protein_coding MGP_WSBEiJ_T0076301.1 MGP_WSBEiJ_G0029910.1 mouse_genomes_project 6 49978767 50032017 + MGP_WSBEiJ_P0076301 Snx10 protein_coding protein_coding MGP_WSBEiJ_T0076302.1 MGP_WSBEiJ_G0029910.1 mouse_genomes_project 6 49978768 50030419 + MGP_WSBEiJ_P0076302 Snx10 protein_coding protein_coding MGP_WSBEiJ_T0076303.1 MGP_WSBEiJ_G0029910.1 mouse_genomes_project 6 49978810 50030390 + MGP_WSBEiJ_P0076303 Snx10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097442.1 MGP_WSBEiJ_G0036112.1 mouse_genomes_project 6 84384524 84387296 + Gm43920 sense_intronic sense_intronic MGP_WSBEiJ_T0011445.1 MGP_WSBEiJ_G0009602.1 mouse_genomes_project 6 50733090 50733186 + Gm28032 misc_RNA misc_RNA MGP_WSBEiJ_T0000283.1 MGP_WSBEiJ_G0000231.1 mouse_genomes_project 6 68252779 68253501 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0010636.1 MGP_WSBEiJ_G0008793.1 mouse_genomes_project 6 127370477 127370606 - Mir8113 miRNA miRNA MGP_WSBEiJ_T0004988.1 MGP_WSBEiJ_G0004253.1 mouse_genomes_project 6 115493181 115543524 + Gm15083 antisense antisense MGP_WSBEiJ_T0014864.1 MGP_WSBEiJ_G0012994.1 mouse_genomes_project 6 42974411 42975114 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008598.1 MGP_WSBEiJ_G0006959.1 mouse_genomes_project 6 131755165 131783823 - 2310001H17Rik lincRNA lincRNA MGP_WSBEiJ_T0008599.1 MGP_WSBEiJ_G0006959.1 mouse_genomes_project 6 131760282 131778872 - 2310001H17Rik lincRNA lincRNA MGP_WSBEiJ_T0008600.1 MGP_WSBEiJ_G0006959.1 mouse_genomes_project 6 131765727 131783866 - 2310001H17Rik lincRNA lincRNA MGP_WSBEiJ_T0008601.1 MGP_WSBEiJ_G0006959.1 mouse_genomes_project 6 131777508 131784600 - 2310001H17Rik lincRNA lincRNA MGP_WSBEiJ_T0008602.1 MGP_WSBEiJ_G0006959.1 mouse_genomes_project 6 131777568 131784357 - 2310001H17Rik lincRNA lincRNA MGP_WSBEiJ_T0008603.1 MGP_WSBEiJ_G0006959.1 mouse_genomes_project 6 131777673 131778881 - 2310001H17Rik lincRNA lincRNA MGP_WSBEiJ_T0010593.1 MGP_WSBEiJ_G0008750.1 mouse_genomes_project 6 46269168 46269270 + Gm24563 miRNA miRNA MGP_WSBEiJ_T0075075.1 MGP_WSBEiJ_G0029631.1 mouse_genomes_project 6 9904794 9910852 + MGP_WSBEiJ_P0075075 Tmem106b protein_coding protein_coding MGP_WSBEiJ_T0075076.1 MGP_WSBEiJ_G0029631.1 mouse_genomes_project 6 9904851 9906989 + MGP_WSBEiJ_P0075076 Tmem106b protein_coding protein_coding MGP_WSBEiJ_T0075077.1 MGP_WSBEiJ_G0029631.1 mouse_genomes_project 6 9904874 9925027 + MGP_WSBEiJ_P0075077 Tmem106b protein_coding protein_coding MGP_WSBEiJ_T0075078.1 MGP_WSBEiJ_G0029631.1 mouse_genomes_project 6 9904886 9911143 + Tmem106b protein_coding retained_intron MGP_WSBEiJ_T0075079.1 MGP_WSBEiJ_G0029631.1 mouse_genomes_project 6 9904889 9912128 + Tmem106b protein_coding processed_transcript MGP_WSBEiJ_T0075080.1 MGP_WSBEiJ_G0029631.1 mouse_genomes_project 6 9905286 9917414 + MGP_WSBEiJ_P0075080 Tmem106b protein_coding protein_coding MGP_WSBEiJ_T0004914.1 MGP_WSBEiJ_G0004209.1 mouse_genomes_project 6 83962502 83984984 + Gm21284 antisense antisense MGP_WSBEiJ_T0002129.1 MGP_WSBEiJ_G0002048.1 mouse_genomes_project 6 144994146 144998613 + TEC TEC MGP_WSBEiJ_T0076601.1 MGP_WSBEiJ_G0029999.1 mouse_genomes_project 6 62520163 62582111 + Grid2 protein_coding processed_transcript MGP_WSBEiJ_T0076602.1 MGP_WSBEiJ_G0029999.1 mouse_genomes_project 6 62520293 63476715 + Grid2 protein_coding processed_transcript MGP_WSBEiJ_T0076603.1 MGP_WSBEiJ_G0029999.1 mouse_genomes_project 6 62520314 63961729 + MGP_WSBEiJ_P0076603 Grid2 protein_coding protein_coding MGP_WSBEiJ_T0076604.1 MGP_WSBEiJ_G0029999.1 mouse_genomes_project 6 62520482 62781353 + Grid2 protein_coding retained_intron MGP_WSBEiJ_T0076605.1 MGP_WSBEiJ_G0029999.1 mouse_genomes_project 6 62521113 63572542 + Grid2 protein_coding retained_intron MGP_WSBEiJ_T0076606.1 MGP_WSBEiJ_G0029999.1 mouse_genomes_project 6 63378338 63396872 + Grid2 protein_coding retained_intron MGP_WSBEiJ_T0076551.1 MGP_WSBEiJ_G0029988.1 mouse_genomes_project 6 57483456 57484536 - MGP_WSBEiJ_P0076551 protein_coding protein_coding MGP_WSBEiJ_T0015014.1 MGP_WSBEiJ_G0013144.1 mouse_genomes_project 6 89624954 89625477 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100908.1 MGP_WSBEiJ_G0039366.1 mouse_genomes_project 6 57101125 57117606 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008413.1 MGP_WSBEiJ_G0006814.1 mouse_genomes_project 6 29049102 29208308 + Gm43154 lincRNA lincRNA MGP_WSBEiJ_T0008414.1 MGP_WSBEiJ_G0006814.1 mouse_genomes_project 6 29049180 29208571 + Gm43154 lincRNA lincRNA MGP_WSBEiJ_T0008417.1 MGP_WSBEiJ_G0006814.1 mouse_genomes_project 6 29120656 29208573 + Gm43154 lincRNA lincRNA MGP_WSBEiJ_T0010576.1 MGP_WSBEiJ_G0008733.1 mouse_genomes_project 6 16538818 16538938 + Mir6370 miRNA miRNA MGP_WSBEiJ_T0002000.1 MGP_WSBEiJ_G0001920.1 mouse_genomes_project 6 83699549 83702349 - TEC TEC MGP_WSBEiJ_T0000294.1 MGP_WSBEiJ_G0000242.1 mouse_genomes_project 6 69481701 69482179 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0079233.1 MGP_WSBEiJ_G0030537.1 mouse_genomes_project 6 134624462 134625389 - MGP_WSBEiJ_P0079233 Tas2r106 protein_coding protein_coding MGP_WSBEiJ_T0014935.1 MGP_WSBEiJ_G0013065.1 mouse_genomes_project 6 64693532 64695135 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008483.1 MGP_WSBEiJ_G0006863.1 mouse_genomes_project 6 60278871 60283445 - Gm43893 lincRNA lincRNA MGP_WSBEiJ_T0002622.1 MGP_WSBEiJ_G0002512.1 mouse_genomes_project 6 39007647 39008118 + MGP_WSBEiJ_P0002622 Trbv15 TR_V_gene TR_V_gene MGP_WSBEiJ_T0075834.1 MGP_WSBEiJ_G0029772.1 mouse_genomes_project 6 37247845 37353571 - MGP_WSBEiJ_P0075834 Dennd2a protein_coding protein_coding MGP_WSBEiJ_T0075835.1 MGP_WSBEiJ_G0029772.1 mouse_genomes_project 6 37248720 37275699 - Dennd2a protein_coding retained_intron MGP_WSBEiJ_T0075836.1 MGP_WSBEiJ_G0029772.1 mouse_genomes_project 6 37253708 37255829 - Dennd2a protein_coding retained_intron MGP_WSBEiJ_T0075837.1 MGP_WSBEiJ_G0029772.1 mouse_genomes_project 6 37271111 37272989 - Dennd2a protein_coding retained_intron MGP_WSBEiJ_T0075838.1 MGP_WSBEiJ_G0029772.1 mouse_genomes_project 6 37284516 37353571 - MGP_WSBEiJ_P0075838 Dennd2a protein_coding protein_coding MGP_WSBEiJ_T0079557.1 MGP_WSBEiJ_G0030626.1 mouse_genomes_project 6 146012867 146031264 + MGP_WSBEiJ_P0079557 Pyroxd1 protein_coding protein_coding MGP_WSBEiJ_T0079558.1 MGP_WSBEiJ_G0030626.1 mouse_genomes_project 6 146012880 146015051 + Pyroxd1 protein_coding retained_intron MGP_WSBEiJ_T0079559.1 MGP_WSBEiJ_G0030626.1 mouse_genomes_project 6 146012891 146030058 + Pyroxd1 protein_coding retained_intron MGP_WSBEiJ_T0079560.1 MGP_WSBEiJ_G0030626.1 mouse_genomes_project 6 146014128 146025531 + Pyroxd1 protein_coding processed_transcript MGP_WSBEiJ_T0079562.1 MGP_WSBEiJ_G0030626.1 mouse_genomes_project 6 146020990 146022725 + Pyroxd1 protein_coding retained_intron MGP_WSBEiJ_T0097440.1 MGP_WSBEiJ_G0036110.1 mouse_genomes_project 6 37941936 37953646 + Gm26638 sense_intronic sense_intronic MGP_WSBEiJ_T0074972.1 MGP_WSBEiJ_G0029607.1 mouse_genomes_project 6 1987559 2023539 - MGP_WSBEiJ_P0074972 Pon3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074973.1 MGP_WSBEiJ_G0029607.1 mouse_genomes_project 6 1987559 2023592 - MGP_WSBEiJ_P0074973 Pon3 protein_coding protein_coding MGP_WSBEiJ_T0074974.1 MGP_WSBEiJ_G0029607.1 mouse_genomes_project 6 1995717 2023541 - MGP_WSBEiJ_P0074974 Pon3 protein_coding protein_coding MGP_WSBEiJ_T0074975.1 MGP_WSBEiJ_G0029607.1 mouse_genomes_project 6 1999696 2023520 - Pon3 protein_coding retained_intron MGP_WSBEiJ_T0074976.1 MGP_WSBEiJ_G0029607.1 mouse_genomes_project 6 2000139 2022172 - Pon3 protein_coding retained_intron MGP_WSBEiJ_T0074977.1 MGP_WSBEiJ_G0029607.1 mouse_genomes_project 6 2021885 2022873 - Pon3 protein_coding processed_transcript MGP_WSBEiJ_T0001972.1 MGP_WSBEiJ_G0001892.1 mouse_genomes_project 6 72645500 72646746 - TEC TEC MGP_WSBEiJ_T0077240.1 MGP_WSBEiJ_G0030128.1 mouse_genomes_project 6 86355059 86422181 - protein_coding processed_transcript MGP_WSBEiJ_T0077242.1 MGP_WSBEiJ_G0030128.1 mouse_genomes_project 6 86390542 86422171 - MGP_WSBEiJ_P0077242 protein_coding protein_coding MGP_WSBEiJ_T0077243.1 MGP_WSBEiJ_G0030128.1 mouse_genomes_project 6 86390573 86392371 - MGP_WSBEiJ_P0077243 protein_coding protein_coding MGP_WSBEiJ_T0004835.1 MGP_WSBEiJ_G0004150.1 mouse_genomes_project 6 25496212 25545991 + 6530409C15Rik antisense antisense MGP_WSBEiJ_T0004836.1 MGP_WSBEiJ_G0004150.1 mouse_genomes_project 6 25496233 25499560 + 6530409C15Rik antisense antisense MGP_WSBEiJ_T0001872.1 MGP_WSBEiJ_G0001792.1 mouse_genomes_project 6 1697693 1698872 + TEC TEC MGP_WSBEiJ_T0075919.1 MGP_WSBEiJ_G0029805.1 mouse_genomes_project 6 39408694 39411983 + MGP_WSBEiJ_P0075919 Prss2 protein_coding protein_coding MGP_WSBEiJ_T0008364.1 MGP_WSBEiJ_G0006782.1 mouse_genomes_project 6 3261861 3293744 - Gm20617 lincRNA lincRNA MGP_WSBEiJ_T0008365.1 MGP_WSBEiJ_G0006782.1 mouse_genomes_project 6 3262265 3293910 - Gm20617 lincRNA lincRNA MGP_WSBEiJ_T0015184.1 MGP_WSBEiJ_G0013314.1 mouse_genomes_project 6 145790295 145791360 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014842.1 MGP_WSBEiJ_G0012972.1 mouse_genomes_project 6 35189047 35189594 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075839.1 MGP_WSBEiJ_G0029773.1 mouse_genomes_project 6 37370236 37386380 + MGP_WSBEiJ_P0075839 Adck2 protein_coding protein_coding MGP_WSBEiJ_T0075840.1 MGP_WSBEiJ_G0029773.1 mouse_genomes_project 6 37370322 37381669 + MGP_WSBEiJ_P0075840 Adck2 protein_coding protein_coding MGP_WSBEiJ_T0075841.1 MGP_WSBEiJ_G0029773.1 mouse_genomes_project 6 37370327 37385363 + MGP_WSBEiJ_P0075841 Adck2 protein_coding protein_coding MGP_WSBEiJ_T0075842.1 MGP_WSBEiJ_G0029773.1 mouse_genomes_project 6 37371347 37376334 + Adck2 protein_coding retained_intron MGP_WSBEiJ_T0075843.1 MGP_WSBEiJ_G0029773.1 mouse_genomes_project 6 37372756 37378400 + MGP_WSBEiJ_P0075843 Adck2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075844.1 MGP_WSBEiJ_G0029773.1 mouse_genomes_project 6 37381551 37383549 + Adck2 protein_coding retained_intron MGP_WSBEiJ_T0008608.1 MGP_WSBEiJ_G0006964.1 mouse_genomes_project 6 138193816 138227338 + Lockd lincRNA lincRNA MGP_WSBEiJ_T0008609.1 MGP_WSBEiJ_G0006964.1 mouse_genomes_project 6 138193822 138220805 + Lockd lincRNA lincRNA MGP_WSBEiJ_T0008610.1 MGP_WSBEiJ_G0006964.1 mouse_genomes_project 6 138193822 138220571 + Lockd lincRNA lincRNA MGP_WSBEiJ_T0008611.1 MGP_WSBEiJ_G0006964.1 mouse_genomes_project 6 138193857 138220803 + Lockd lincRNA lincRNA MGP_WSBEiJ_T0008612.1 MGP_WSBEiJ_G0006964.1 mouse_genomes_project 6 138193879 138220946 + Lockd lincRNA lincRNA MGP_WSBEiJ_T0017685.1 MGP_WSBEiJ_G0015059.1 mouse_genomes_project 6 66362430 66409035 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_WSBEiJ_T0017686.1 MGP_WSBEiJ_G0015059.1 mouse_genomes_project 6 66362436 66392149 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_WSBEiJ_T0017687.1 MGP_WSBEiJ_G0015059.1 mouse_genomes_project 6 66362486 66408520 + E230016M11Rik processed_transcript retained_intron MGP_WSBEiJ_T0017688.1 MGP_WSBEiJ_G0015059.1 mouse_genomes_project 6 66405140 66408478 + E230016M11Rik processed_transcript retained_intron MGP_WSBEiJ_T0001941.1 MGP_WSBEiJ_G0001861.1 mouse_genomes_project 6 47537496 47539064 + TEC TEC MGP_WSBEiJ_T0010641.1 MGP_WSBEiJ_G0008798.1 mouse_genomes_project 6 132276309 132276418 + Mir680-1 miRNA miRNA MGP_WSBEiJ_T0100903.1 MGP_WSBEiJ_G0039361.1 mouse_genomes_project 6 56826567 56826701 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079330.1 MGP_WSBEiJ_G0030578.1 mouse_genomes_project 6 138394180 138407564 - MGP_WSBEiJ_P0079330 Gprc5d protein_coding protein_coding MGP_WSBEiJ_T0079331.1 MGP_WSBEiJ_G0030578.1 mouse_genomes_project 6 138394180 138407527 - MGP_WSBEiJ_P0079331 Gprc5d protein_coding protein_coding MGP_WSBEiJ_T0008395.1 MGP_WSBEiJ_G0006803.1 mouse_genomes_project 6 27715939 27745822 + 1700095J07Rik lincRNA lincRNA MGP_WSBEiJ_T0008396.1 MGP_WSBEiJ_G0006803.1 mouse_genomes_project 6 27715955 27719103 + 1700095J07Rik lincRNA lincRNA MGP_WSBEiJ_T0099689.1 MGP_WSBEiJ_G0038352.1 mouse_genomes_project 6 126813758 126814027 + Gm23547 snoRNA snoRNA MGP_WSBEiJ_T0079210.1 MGP_WSBEiJ_G0030529.1 mouse_genomes_project 6 132423270 132474468 - MGP_WSBEiJ_P0079210 Klra17 protein_coding protein_coding MGP_WSBEiJ_T0079211.1 MGP_WSBEiJ_G0030529.1 mouse_genomes_project 6 132423280 132474470 - MGP_WSBEiJ_P0079211 Klra17 protein_coding protein_coding MGP_WSBEiJ_T0015060.1 MGP_WSBEiJ_G0013190.1 mouse_genomes_project 6 109308221 109308834 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014789.1 MGP_WSBEiJ_G0012919.1 mouse_genomes_project 6 4626892 4627282 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008401.1 MGP_WSBEiJ_G0006807.1 mouse_genomes_project 6 28511646 28511950 - Gm13834 lincRNA lincRNA MGP_WSBEiJ_T0078860.1 MGP_WSBEiJ_G0030446.1 mouse_genomes_project 6 127079398 127086528 - MGP_WSBEiJ_P0078860 Cops7a protein_coding protein_coding MGP_WSBEiJ_T0078861.1 MGP_WSBEiJ_G0030446.1 mouse_genomes_project 6 127079801 127086438 - MGP_WSBEiJ_P0078861 Cops7a protein_coding protein_coding MGP_WSBEiJ_T0078862.1 MGP_WSBEiJ_G0030446.1 mouse_genomes_project 6 127080219 127081127 - Cops7a protein_coding retained_intron MGP_WSBEiJ_T0078863.1 MGP_WSBEiJ_G0030446.1 mouse_genomes_project 6 127080892 127086280 - MGP_WSBEiJ_P0078863 Cops7a protein_coding protein_coding MGP_WSBEiJ_T0078864.1 MGP_WSBEiJ_G0030446.1 mouse_genomes_project 6 127082143 127086398 - MGP_WSBEiJ_P0078864 Cops7a protein_coding protein_coding MGP_WSBEiJ_T0078865.1 MGP_WSBEiJ_G0030446.1 mouse_genomes_project 6 127083608 127086197 - MGP_WSBEiJ_P0078865 Cops7a protein_coding protein_coding MGP_WSBEiJ_T0078866.1 MGP_WSBEiJ_G0030446.1 mouse_genomes_project 6 127085543 127086502 - Cops7a protein_coding retained_intron MGP_WSBEiJ_T0015051.1 MGP_WSBEiJ_G0013181.1 mouse_genomes_project 6 104497831 104497984 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079638.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148740280 148802864 - MGP_WSBEiJ_P0079638 Bcat1 protein_coding protein_coding MGP_WSBEiJ_T0079639.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148746351 148831443 - MGP_WSBEiJ_P0079639 Bcat1 protein_coding protein_coding MGP_WSBEiJ_T0079640.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148752488 148831443 - MGP_WSBEiJ_P0079640 Bcat1 protein_coding protein_coding MGP_WSBEiJ_T0079641.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148752768 148788318 - Bcat1 protein_coding processed_transcript MGP_WSBEiJ_T0079642.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148756288 148802662 - MGP_WSBEiJ_P0079642 Bcat1 protein_coding protein_coding MGP_WSBEiJ_T0079643.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148764252 148785629 - MGP_WSBEiJ_P0079643 Bcat1 protein_coding protein_coding MGP_WSBEiJ_T0079644.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148767679 148801907 - MGP_WSBEiJ_P0079644 Bcat1 protein_coding protein_coding MGP_WSBEiJ_T0079645.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148785575 148794919 - Bcat1 protein_coding processed_transcript MGP_WSBEiJ_T0079646.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148785594 148801715 - MGP_WSBEiJ_P0079646 Bcat1 protein_coding protein_coding MGP_WSBEiJ_T0079647.1 MGP_WSBEiJ_G0030640.1 mouse_genomes_project 6 148785658 148795031 - Bcat1 protein_coding processed_transcript MGP_WSBEiJ_T0001925.1 MGP_WSBEiJ_G0001845.1 mouse_genomes_project 6 43340598 43341862 + TEC TEC MGP_WSBEiJ_T0001943.1 MGP_WSBEiJ_G0001863.1 mouse_genomes_project 6 50744140 50745383 - TEC TEC MGP_WSBEiJ_T0017694.1 MGP_WSBEiJ_G0015062.1 mouse_genomes_project 6 83836530 83843096 + B230319C09Rik processed_transcript antisense MGP_WSBEiJ_T0017695.1 MGP_WSBEiJ_G0015062.1 mouse_genomes_project 6 83836585 83840134 + B230319C09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017696.1 MGP_WSBEiJ_G0015062.1 mouse_genomes_project 6 83836587 83837421 + B230319C09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0001874.1 MGP_WSBEiJ_G0001794.1 mouse_genomes_project 6 1982797 1987245 - TEC TEC MGP_WSBEiJ_T0079051.1 MGP_WSBEiJ_G0030485.1 mouse_genomes_project 6 130176986 130248536 + MGP_WSBEiJ_P0079051 Tspan11 protein_coding protein_coding MGP_WSBEiJ_T0079052.1 MGP_WSBEiJ_G0030485.1 mouse_genomes_project 6 130177176 130216932 + Tspan11 protein_coding retained_intron MGP_WSBEiJ_T0014973.1 MGP_WSBEiJ_G0013103.1 mouse_genomes_project 6 71843589 71844535 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077344.1 MGP_WSBEiJ_G0030150.1 mouse_genomes_project 6 87334070 87343442 - MGP_WSBEiJ_P0077344 Snrnp27 protein_coding protein_coding MGP_WSBEiJ_T0077345.1 MGP_WSBEiJ_G0030150.1 mouse_genomes_project 6 87334324 87343411 - Snrnp27 protein_coding processed_transcript MGP_WSBEiJ_T0077346.1 MGP_WSBEiJ_G0030150.1 mouse_genomes_project 6 87334591 87343442 - MGP_WSBEiJ_P0077346 Snrnp27 protein_coding protein_coding MGP_WSBEiJ_T0077347.1 MGP_WSBEiJ_G0030150.1 mouse_genomes_project 6 87341595 87343437 - Snrnp27 protein_coding processed_transcript MGP_WSBEiJ_T0000174.1 MGP_WSBEiJ_G0000131.1 mouse_genomes_project 6 68415194 68415737 - MGP_WSBEiJ_P0000174 Igkv4-91 IG_V_gene IG_V_gene MGP_WSBEiJ_T0015145.1 MGP_WSBEiJ_G0013275.1 mouse_genomes_project 6 134177843 134177958 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078467.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523179 121537128 + Rad52 protein_coding processed_transcript MGP_WSBEiJ_T0078468.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523184 121545370 + MGP_WSBEiJ_P0078468 Rad52 protein_coding protein_coding MGP_WSBEiJ_T0078469.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523184 121545375 + MGP_WSBEiJ_P0078469 Rad52 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078470.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523186 121535517 + Rad52 protein_coding retained_intron MGP_WSBEiJ_T0078471.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523186 121534890 + Rad52 protein_coding processed_transcript MGP_WSBEiJ_T0078472.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523209 121544052 + Rad52 protein_coding retained_intron MGP_WSBEiJ_T0078473.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523215 121541903 + Rad52 protein_coding processed_transcript MGP_WSBEiJ_T0078474.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523215 121541903 + Rad52 protein_coding processed_transcript MGP_WSBEiJ_T0078475.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523220 121543550 + Rad52 protein_coding retained_intron MGP_WSBEiJ_T0078476.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121523257 121545370 + MGP_WSBEiJ_P0078476 Rad52 protein_coding protein_coding MGP_WSBEiJ_T0078477.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121535030 121536011 + Rad52 protein_coding retained_intron MGP_WSBEiJ_T0078478.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121535743 121541521 + Rad52 protein_coding retained_intron MGP_WSBEiJ_T0078479.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121537044 121541666 + Rad52 protein_coding retained_intron MGP_WSBEiJ_T0078480.1 MGP_WSBEiJ_G0030367.1 mouse_genomes_project 6 121540816 121544310 + Rad52 protein_coding retained_intron MGP_WSBEiJ_T0010634.1 MGP_WSBEiJ_G0008791.1 mouse_genomes_project 6 127222689 127222752 + Mir7045 miRNA miRNA MGP_WSBEiJ_T0079413.1 MGP_WSBEiJ_G0030600.1 mouse_genomes_project 6 140698119 140839650 + Ptpro protein_coding retained_intron MGP_WSBEiJ_T0079414.1 MGP_WSBEiJ_G0030600.1 mouse_genomes_project 6 140698134 140924759 + MGP_WSBEiJ_P0079414 Ptpro protein_coding protein_coding MGP_WSBEiJ_T0079415.1 MGP_WSBEiJ_G0030600.1 mouse_genomes_project 6 140698265 140924759 + MGP_WSBEiJ_P0079415 Ptpro protein_coding protein_coding MGP_WSBEiJ_T0079416.1 MGP_WSBEiJ_G0030600.1 mouse_genomes_project 6 140874066 140924765 + MGP_WSBEiJ_P0079416 Ptpro protein_coding protein_coding MGP_WSBEiJ_T0079417.1 MGP_WSBEiJ_G0030600.1 mouse_genomes_project 6 140874082 140924765 + MGP_WSBEiJ_P0079417 Ptpro protein_coding protein_coding MGP_WSBEiJ_T0079418.1 MGP_WSBEiJ_G0030600.1 mouse_genomes_project 6 140874104 140877503 + Ptpro protein_coding retained_intron MGP_WSBEiJ_T0079419.1 MGP_WSBEiJ_G0030600.1 mouse_genomes_project 6 140914448 140923836 + Ptpro protein_coding processed_transcript MGP_WSBEiJ_T0079420.1 MGP_WSBEiJ_G0030600.1 mouse_genomes_project 6 140915598 140924154 + Ptpro protein_coding processed_transcript MGP_WSBEiJ_T0014874.1 MGP_WSBEiJ_G0013004.1 mouse_genomes_project 6 47079788 47081882 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002135.1 MGP_WSBEiJ_G0002054.1 mouse_genomes_project 6 149674219 149676095 + TEC TEC MGP_WSBEiJ_T0000164.1 MGP_WSBEiJ_G0000125.1 mouse_genomes_project 6 68186464 68187243 + MGP_WSBEiJ_P0000164 Igkv1-99 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000165.1 MGP_WSBEiJ_G0000125.1 mouse_genomes_project 6 68186478 68187243 + MGP_WSBEiJ_P0000165 Igkv1-99 IG_V_gene IG_V_gene MGP_WSBEiJ_T0079341.1 MGP_WSBEiJ_G0030581.1 mouse_genomes_project 6 138536828 138548512 - MGP_WSBEiJ_P0079341 Gsg1 protein_coding protein_coding MGP_WSBEiJ_T0079342.1 MGP_WSBEiJ_G0030581.1 mouse_genomes_project 6 138536831 138555505 - MGP_WSBEiJ_P0079342 Gsg1 protein_coding protein_coding MGP_WSBEiJ_T0079343.1 MGP_WSBEiJ_G0030581.1 mouse_genomes_project 6 138536831 138555661 - MGP_WSBEiJ_P0079343 Gsg1 protein_coding protein_coding MGP_WSBEiJ_T0079344.1 MGP_WSBEiJ_G0030581.1 mouse_genomes_project 6 138536838 138555686 - MGP_WSBEiJ_P0079344 Gsg1 protein_coding protein_coding MGP_WSBEiJ_T0077476.1 MGP_WSBEiJ_G0030177.1 mouse_genomes_project 6 88947462 88948452 + MGP_WSBEiJ_P0077476 Dnajb8 protein_coding protein_coding MGP_WSBEiJ_T0077477.1 MGP_WSBEiJ_G0030177.1 mouse_genomes_project 6 88948079 88979171 + MGP_WSBEiJ_P0077477 Dnajb8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099668.1 MGP_WSBEiJ_G0038331.1 mouse_genomes_project 6 94442435 94442565 + Gm22312 snoRNA snoRNA MGP_WSBEiJ_T0077511.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89576921 89582908 - MGP_WSBEiJ_P0077511 Abtb1 protein_coding protein_coding MGP_WSBEiJ_T0077512.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89576931 89582902 - MGP_WSBEiJ_P0077512 Abtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077513.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89577155 89582992 - MGP_WSBEiJ_P0077513 Abtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077514.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89577285 89579723 - Abtb1 protein_coding retained_intron MGP_WSBEiJ_T0077515.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89577430 89579874 - MGP_WSBEiJ_P0077515 Abtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077516.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89577692 89580088 - MGP_WSBEiJ_P0077516 Abtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077517.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89579122 89580163 - MGP_WSBEiJ_P0077517 Abtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077518.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89579461 89582874 - MGP_WSBEiJ_P0077518 Abtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077519.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89579664 89580597 - Abtb1 protein_coding retained_intron MGP_WSBEiJ_T0077520.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89579852 89582890 - MGP_WSBEiJ_P0077520 Abtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077521.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89580025 89582838 - Abtb1 protein_coding retained_intron MGP_WSBEiJ_T0077522.1 MGP_WSBEiJ_G0030183.1 mouse_genomes_project 6 89580672 89582943 - MGP_WSBEiJ_P0077522 Abtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076514.1 MGP_WSBEiJ_G0029969.1 mouse_genomes_project 6 56070000 56071035 - MGP_WSBEiJ_P0076514 Vmn1r16 protein_coding protein_coding MGP_WSBEiJ_T0002523.1 MGP_WSBEiJ_G0002431.1 mouse_genomes_project 6 39432206 39432255 + MGP_WSBEiJ_P0002523 Trbj2-3 TR_J_gene TR_J_gene MGP_WSBEiJ_T0014817.1 MGP_WSBEiJ_G0012947.1 mouse_genomes_project 6 16758406 16760107 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014966.1 MGP_WSBEiJ_G0013096.1 mouse_genomes_project 6 68032101 68033622 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001924.1 MGP_WSBEiJ_G0001844.1 mouse_genomes_project 6 43335614 43337019 + TEC TEC MGP_WSBEiJ_T0078072.1 MGP_WSBEiJ_G0030295.1 mouse_genomes_project 6 114902555 114908191 + MGP_WSBEiJ_P0078072 Jagn1 protein_coding protein_coding MGP_WSBEiJ_T0078073.1 MGP_WSBEiJ_G0030295.1 mouse_genomes_project 6 114902581 114904998 + Jagn1 protein_coding retained_intron MGP_WSBEiJ_T0078074.1 MGP_WSBEiJ_G0030295.1 mouse_genomes_project 6 114902596 114908171 + MGP_WSBEiJ_P0078074 Jagn1 protein_coding protein_coding MGP_WSBEiJ_T0010631.1 MGP_WSBEiJ_G0008788.1 mouse_genomes_project 6 124739891 124739952 + Mir7231 miRNA miRNA MGP_WSBEiJ_T0015194.1 MGP_WSBEiJ_G0013324.1 mouse_genomes_project 6 152884547 152884959 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002671.1 MGP_WSBEiJ_G0002555.1 mouse_genomes_project 6 38970082 38970342 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0079256.1 MGP_WSBEiJ_G0030558.1 mouse_genomes_project 6 136064545 136065482 + MGP_WSBEiJ_P0079256 Tas2r125 protein_coding protein_coding MGP_WSBEiJ_T0014975.1 MGP_WSBEiJ_G0013105.1 mouse_genomes_project 6 72018566 72019062 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004953.1 MGP_WSBEiJ_G0004231.1 mouse_genomes_project 6 91409296 91412557 - Gm15756 antisense antisense MGP_WSBEiJ_T0015132.1 MGP_WSBEiJ_G0013262.1 mouse_genomes_project 6 130044447 130044673 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097078.1 MGP_WSBEiJ_G0035759.1 mouse_genomes_project 6 9550748 9550868 + n-R5s160 rRNA rRNA MGP_WSBEiJ_T0002526.1 MGP_WSBEiJ_G0002434.1 mouse_genomes_project 6 39432793 39432840 + MGP_WSBEiJ_P0002526 Trbj2-7 TR_J_gene TR_J_gene MGP_WSBEiJ_T0008551.1 MGP_WSBEiJ_G0006916.1 mouse_genomes_project 6 101739526 101740918 + Gm44107 lincRNA lincRNA MGP_WSBEiJ_T0076016.1 MGP_WSBEiJ_G0029840.1 mouse_genomes_project 6 40806066 40809954 + MGP_WSBEiJ_P0076016 Olfr449 protein_coding protein_coding MGP_WSBEiJ_T0076017.1 MGP_WSBEiJ_G0029840.1 mouse_genomes_project 6 40806066 40810140 + MGP_WSBEiJ_P0076017 Olfr449 protein_coding protein_coding MGP_WSBEiJ_T0076018.1 MGP_WSBEiJ_G0029840.1 mouse_genomes_project 6 40806114 40809620 + MGP_WSBEiJ_P0076018 Olfr449 protein_coding protein_coding MGP_WSBEiJ_T0076019.1 MGP_WSBEiJ_G0029840.1 mouse_genomes_project 6 40809531 40810568 + MGP_WSBEiJ_P0076019 Olfr449 protein_coding protein_coding MGP_WSBEiJ_T0076024.1 MGP_WSBEiJ_G0029845.1 mouse_genomes_project 6 41159750 41160750 + MGP_WSBEiJ_P0076024 protein_coding protein_coding MGP_WSBEiJ_T0077937.1 MGP_WSBEiJ_G0030272.1 mouse_genomes_project 6 110097722 110104068 + MGP_WSBEiJ_P0077937 Bhlhe40 protein_coding protein_coding MGP_WSBEiJ_T0077938.1 MGP_WSBEiJ_G0030272.1 mouse_genomes_project 6 110097892 110098428 + Bhlhe40 protein_coding retained_intron MGP_WSBEiJ_T0077939.1 MGP_WSBEiJ_G0030272.1 mouse_genomes_project 6 110097967 110099794 + MGP_WSBEiJ_P0077939 Bhlhe40 protein_coding protein_coding MGP_WSBEiJ_T0077940.1 MGP_WSBEiJ_G0030272.1 mouse_genomes_project 6 110100139 110102808 + Bhlhe40 protein_coding retained_intron MGP_WSBEiJ_T0097507.1 MGP_WSBEiJ_G0036171.1 mouse_genomes_project 6 92374758 92384732 + Gm45216 sense_overlapping sense_overlapping MGP_WSBEiJ_T0100898.1 MGP_WSBEiJ_G0039356.1 mouse_genomes_project 6 41197468 41197991 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0076454.1 MGP_WSBEiJ_G0029948.1 mouse_genomes_project 6 54092653 54142841 + MGP_WSBEiJ_P0076454 Adcyap1r1 protein_coding protein_coding MGP_WSBEiJ_T0076455.1 MGP_WSBEiJ_G0029948.1 mouse_genomes_project 6 54092703 54145385 + MGP_WSBEiJ_P0076455 Adcyap1r1 protein_coding protein_coding MGP_WSBEiJ_T0076456.1 MGP_WSBEiJ_G0029948.1 mouse_genomes_project 6 54092732 54120432 + MGP_WSBEiJ_P0076456 Adcyap1r1 protein_coding protein_coding MGP_WSBEiJ_T0076457.1 MGP_WSBEiJ_G0029948.1 mouse_genomes_project 6 54092852 54100902 + MGP_WSBEiJ_P0076457 Adcyap1r1 protein_coding protein_coding MGP_WSBEiJ_T0076458.1 MGP_WSBEiJ_G0029948.1 mouse_genomes_project 6 54100892 54141107 + MGP_WSBEiJ_P0076458 Adcyap1r1 protein_coding protein_coding MGP_WSBEiJ_T0076459.1 MGP_WSBEiJ_G0029948.1 mouse_genomes_project 6 54100892 54141364 + MGP_WSBEiJ_P0076459 Adcyap1r1 protein_coding protein_coding MGP_WSBEiJ_T0076460.1 MGP_WSBEiJ_G0029948.1 mouse_genomes_project 6 54100892 54141107 + MGP_WSBEiJ_P0076460 Adcyap1r1 protein_coding protein_coding MGP_WSBEiJ_T0076461.1 MGP_WSBEiJ_G0029948.1 mouse_genomes_project 6 54100892 54141107 + MGP_WSBEiJ_P0076461 Adcyap1r1 protein_coding protein_coding MGP_WSBEiJ_T0004846.1 MGP_WSBEiJ_G0004159.1 mouse_genomes_project 6 30525568 30530319 + Gm14540 antisense antisense MGP_WSBEiJ_T0001882.1 MGP_WSBEiJ_G0001802.1 mouse_genomes_project 6 12724601 12726336 + TEC TEC MGP_WSBEiJ_T0075896.1 MGP_WSBEiJ_G0029789.1 mouse_genomes_project 6 38453946 38454942 - MGP_WSBEiJ_P0075896 Tas2r138 protein_coding protein_coding MGP_WSBEiJ_T0078611.1 MGP_WSBEiJ_G0030391.1 mouse_genomes_project 6 124126832 124138700 - MGP_WSBEiJ_P0078611 Klrg1 protein_coding protein_coding MGP_WSBEiJ_T0078612.1 MGP_WSBEiJ_G0030391.1 mouse_genomes_project 6 124127608 124138143 - MGP_WSBEiJ_P0078612 Klrg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078997.1 MGP_WSBEiJ_G0030472.1 mouse_genomes_project 6 128923458 128957773 - MGP_WSBEiJ_P0078997 Kcna6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078998.1 MGP_WSBEiJ_G0030472.1 mouse_genomes_project 6 128923460 128953916 - Kcna6 protein_coding processed_transcript MGP_WSBEiJ_T0078999.1 MGP_WSBEiJ_G0030472.1 mouse_genomes_project 6 128923461 128957785 - MGP_WSBEiJ_P0078999 Kcna6 protein_coding protein_coding MGP_WSBEiJ_T0079000.1 MGP_WSBEiJ_G0030472.1 mouse_genomes_project 6 128953792 128957256 - MGP_WSBEiJ_P0079000 Kcna6 protein_coding protein_coding MGP_WSBEiJ_T0076275.1 MGP_WSBEiJ_G0029906.1 mouse_genomes_project 6 49009700 49013465 - MGP_WSBEiJ_P0076275 Npvf protein_coding protein_coding MGP_WSBEiJ_T0079819.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152713389 152714552 - Caprin2 protein_coding retained_intron MGP_WSBEiJ_T0079820.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152713389 152769094 - MGP_WSBEiJ_P0079820 Caprin2 protein_coding protein_coding MGP_WSBEiJ_T0079821.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152713390 152723248 - MGP_WSBEiJ_P0079821 Caprin2 protein_coding protein_coding MGP_WSBEiJ_T0079822.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152713390 152769007 - MGP_WSBEiJ_P0079822 Caprin2 protein_coding protein_coding MGP_WSBEiJ_T0079823.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152714938 152721036 - Caprin2 protein_coding retained_intron MGP_WSBEiJ_T0079824.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152715466 152723219 - Caprin2 protein_coding processed_transcript MGP_WSBEiJ_T0079825.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152719461 152733482 - Caprin2 protein_coding processed_transcript MGP_WSBEiJ_T0079826.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152750500 152768316 - MGP_WSBEiJ_P0079826 Caprin2 protein_coding protein_coding MGP_WSBEiJ_T0079827.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152757133 152763424 - Caprin2 protein_coding retained_intron MGP_WSBEiJ_T0079828.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152760267 152769019 - Caprin2 protein_coding processed_transcript MGP_WSBEiJ_T0079829.1 MGP_WSBEiJ_G0030671.1 mouse_genomes_project 6 152767026 152768466 - Caprin2 protein_coding processed_transcript MGP_WSBEiJ_T0076216.1 MGP_WSBEiJ_G0029894.1 mouse_genomes_project 6 47308667 47310499 + Gpnmb protein_coding retained_intron MGP_WSBEiJ_T0076217.1 MGP_WSBEiJ_G0029894.1 mouse_genomes_project 6 47308736 47330324 + MGP_WSBEiJ_P0076217 Gpnmb protein_coding protein_coding MGP_WSBEiJ_T0076218.1 MGP_WSBEiJ_G0029894.1 mouse_genomes_project 6 47308786 47315070 + MGP_WSBEiJ_P0076218 Gpnmb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076219.1 MGP_WSBEiJ_G0029894.1 mouse_genomes_project 6 47308798 47344431 + MGP_WSBEiJ_P0076219 Gpnmb protein_coding protein_coding MGP_WSBEiJ_T0076220.1 MGP_WSBEiJ_G0029894.1 mouse_genomes_project 6 47319583 47320511 + Gpnmb protein_coding retained_intron MGP_WSBEiJ_T0077565.1 MGP_WSBEiJ_G0030188.1 mouse_genomes_project 6 90073720 90115086 - MGP_WSBEiJ_P0077565 Plxna1 protein_coding protein_coding MGP_WSBEiJ_T0077566.1 MGP_WSBEiJ_G0030188.1 mouse_genomes_project 6 90078039 90078505 - Plxna1 protein_coding retained_intron MGP_WSBEiJ_T0077567.1 MGP_WSBEiJ_G0030188.1 mouse_genomes_project 6 90079930 90082049 - MGP_WSBEiJ_P0077567 Plxna1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077568.1 MGP_WSBEiJ_G0030188.1 mouse_genomes_project 6 90087792 90090486 - Plxna1 protein_coding processed_transcript MGP_WSBEiJ_T0077569.1 MGP_WSBEiJ_G0030188.1 mouse_genomes_project 6 90092826 90100005 - MGP_WSBEiJ_P0077569 Plxna1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076750.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71753184 71778171 + Immt protein_coding retained_intron MGP_WSBEiJ_T0076751.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71753185 71784146 + MGP_WSBEiJ_P0076751 Immt protein_coding protein_coding MGP_WSBEiJ_T0076752.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71753215 71798307 + MGP_WSBEiJ_P0076752 Immt protein_coding protein_coding MGP_WSBEiJ_T0076753.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71753218 71798311 + MGP_WSBEiJ_P0076753 Immt protein_coding protein_coding MGP_WSBEiJ_T0076754.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71753223 71798300 + MGP_WSBEiJ_P0076754 Immt protein_coding protein_coding MGP_WSBEiJ_T0076755.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71753237 71800435 + MGP_WSBEiJ_P0076755 Immt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076756.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71753264 71779937 + MGP_WSBEiJ_P0076756 Immt protein_coding protein_coding MGP_WSBEiJ_T0076757.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71753276 71798311 + MGP_WSBEiJ_P0076757 Immt protein_coding protein_coding MGP_WSBEiJ_T0076758.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71786556 71790043 + Immt protein_coding retained_intron MGP_WSBEiJ_T0076759.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71793077 71796128 + Immt protein_coding retained_intron MGP_WSBEiJ_T0076760.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71794182 71798304 + Immt protein_coding retained_intron MGP_WSBEiJ_T0076761.1 MGP_WSBEiJ_G0030035.1 mouse_genomes_project 6 71794546 71797582 + MGP_WSBEiJ_P0076761 Immt protein_coding protein_coding MGP_WSBEiJ_T0015082.1 MGP_WSBEiJ_G0013212.1 mouse_genomes_project 6 116497964 116498295 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075920.1 MGP_WSBEiJ_G0029806.1 mouse_genomes_project 6 39500450 39515510 + MGP_WSBEiJ_P0075920 Ephb6 protein_coding protein_coding MGP_WSBEiJ_T0075921.1 MGP_WSBEiJ_G0029806.1 mouse_genomes_project 6 39508273 39509587 + Ephb6 protein_coding processed_transcript MGP_WSBEiJ_T0075922.1 MGP_WSBEiJ_G0029806.1 mouse_genomes_project 6 39509667 39511758 + MGP_WSBEiJ_P0075922 Ephb6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075923.1 MGP_WSBEiJ_G0029806.1 mouse_genomes_project 6 39514943 39515508 + MGP_WSBEiJ_P0075923 Ephb6 protein_coding protein_coding MGP_WSBEiJ_T0001975.1 MGP_WSBEiJ_G0001895.1 mouse_genomes_project 6 72916532 72917489 - TEC TEC MGP_WSBEiJ_T0076913.1 MGP_WSBEiJ_G0030066.1 mouse_genomes_project 6 78651692 78657653 + MGP_WSBEiJ_P0076913 Reg1 protein_coding protein_coding MGP_WSBEiJ_T0076914.1 MGP_WSBEiJ_G0030066.1 mouse_genomes_project 6 78651752 78657653 + MGP_WSBEiJ_P0076914 Reg1 protein_coding protein_coding MGP_WSBEiJ_T0076915.1 MGP_WSBEiJ_G0030066.1 mouse_genomes_project 6 78654968 78657652 + MGP_WSBEiJ_P0076915 Reg1 protein_coding protein_coding MGP_WSBEiJ_T0078613.1 MGP_WSBEiJ_G0030392.1 mouse_genomes_project 6 124153967 124155031 + MGP_WSBEiJ_P0078613 protein_coding protein_coding MGP_WSBEiJ_T0078614.1 MGP_WSBEiJ_G0030392.1 mouse_genomes_project 6 124154282 124154992 + protein_coding processed_transcript MGP_WSBEiJ_T0008479.1 MGP_WSBEiJ_G0006859.1 mouse_genomes_project 6 55245679 55331136 - Gm8239 lincRNA lincRNA MGP_WSBEiJ_T0079781.1 MGP_WSBEiJ_G0030666.1 mouse_genomes_project 6 151299747 151335919 + MGP_WSBEiJ_P0079781 Ccdc91 protein_coding protein_coding MGP_WSBEiJ_T0079782.1 MGP_WSBEiJ_G0030666.1 mouse_genomes_project 6 151299790 151461764 + MGP_WSBEiJ_P0079782 Ccdc91 protein_coding protein_coding MGP_WSBEiJ_T0079783.1 MGP_WSBEiJ_G0030666.1 mouse_genomes_project 6 151299910 151364921 + MGP_WSBEiJ_P0079783 Ccdc91 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079784.1 MGP_WSBEiJ_G0030666.1 mouse_genomes_project 6 151362228 151374816 + Ccdc91 protein_coding processed_transcript MGP_WSBEiJ_T0076607.1 MGP_WSBEiJ_G0030000.1 mouse_genomes_project 6 64020356 64022478 + MGP_WSBEiJ_P0076607 Atoh1 protein_coding protein_coding MGP_WSBEiJ_T0099692.1 MGP_WSBEiJ_G0038355.1 mouse_genomes_project 6 134301358 134301492 - Gm22362 snoRNA snoRNA MGP_WSBEiJ_T0014941.1 MGP_WSBEiJ_G0013071.1 mouse_genomes_project 6 65560865 65565945 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099650.1 MGP_WSBEiJ_G0038313.1 mouse_genomes_project 6 53596598 53596727 + Gm24230 snoRNA snoRNA MGP_WSBEiJ_T0015149.1 MGP_WSBEiJ_G0013279.1 mouse_genomes_project 6 134816397 134816607 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099658.1 MGP_WSBEiJ_G0038321.1 mouse_genomes_project 6 68176736 68176869 + Gm25833 snoRNA snoRNA MGP_WSBEiJ_T0001969.1 MGP_WSBEiJ_G0001889.1 mouse_genomes_project 6 72414335 72415895 + TEC TEC MGP_WSBEiJ_T0099693.1 MGP_WSBEiJ_G0038356.1 mouse_genomes_project 6 138439196 138439330 + Gm22881 snoRNA snoRNA MGP_WSBEiJ_T0076002.1 MGP_WSBEiJ_G0029834.1 mouse_genomes_project 6 40585797 40616774 - MGP_WSBEiJ_P0076002 Tcaf2 protein_coding protein_coding MGP_WSBEiJ_T0076003.1 MGP_WSBEiJ_G0029834.1 mouse_genomes_project 6 40589295 40592349 - Tcaf2 protein_coding retained_intron MGP_WSBEiJ_T0002079.1 MGP_WSBEiJ_G0001999.1 mouse_genomes_project 6 115167109 115167647 + TEC TEC MGP_WSBEiJ_T0011466.1 MGP_WSBEiJ_G0009623.1 mouse_genomes_project 6 113415346 113415661 + Gm25454 misc_RNA misc_RNA MGP_WSBEiJ_T0014887.1 MGP_WSBEiJ_G0013017.1 mouse_genomes_project 6 48043187 48043460 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002117.1 MGP_WSBEiJ_G0002036.1 mouse_genomes_project 6 139984192 139986640 + TEC TEC MGP_WSBEiJ_T0078920.1 MGP_WSBEiJ_G0030455.1 mouse_genomes_project 6 127294414 127298213 - MGP_WSBEiJ_P0078920 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078921.1 MGP_WSBEiJ_G0030455.1 mouse_genomes_project 6 127294788 127298213 - MGP_WSBEiJ_P0078921 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078922.1 MGP_WSBEiJ_G0030455.1 mouse_genomes_project 6 127295927 127298212 - MGP_WSBEiJ_P0078922 protein_coding protein_coding MGP_WSBEiJ_T0078923.1 MGP_WSBEiJ_G0030455.1 mouse_genomes_project 6 127295955 127298212 - protein_coding processed_transcript MGP_WSBEiJ_T0078924.1 MGP_WSBEiJ_G0030455.1 mouse_genomes_project 6 127297206 127298214 - protein_coding retained_intron MGP_WSBEiJ_T0077478.1 MGP_WSBEiJ_G0030178.1 mouse_genomes_project 6 88982089 89178309 - MGP_WSBEiJ_P0077478 Eefsec protein_coding protein_coding MGP_WSBEiJ_T0077479.1 MGP_WSBEiJ_G0030178.1 mouse_genomes_project 6 88982628 89178297 - MGP_WSBEiJ_P0077479 Eefsec protein_coding protein_coding MGP_WSBEiJ_T0077480.1 MGP_WSBEiJ_G0030178.1 mouse_genomes_project 6 88983028 89178284 - MGP_WSBEiJ_P0077480 Eefsec protein_coding protein_coding MGP_WSBEiJ_T0077481.1 MGP_WSBEiJ_G0030178.1 mouse_genomes_project 6 89006369 89178272 - MGP_WSBEiJ_P0077481 Eefsec protein_coding protein_coding MGP_WSBEiJ_T0077482.1 MGP_WSBEiJ_G0030178.1 mouse_genomes_project 6 89021569 89171610 - MGP_WSBEiJ_P0077482 Eefsec protein_coding protein_coding MGP_WSBEiJ_T0077483.1 MGP_WSBEiJ_G0030178.1 mouse_genomes_project 6 89021752 89178254 - MGP_WSBEiJ_P0077483 Eefsec protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004863.1 MGP_WSBEiJ_G0004174.1 mouse_genomes_project 6 40328197 40338072 + 2010310C07Rik antisense antisense MGP_WSBEiJ_T0004864.1 MGP_WSBEiJ_G0004174.1 mouse_genomes_project 6 40335472 40338732 + 2010310C07Rik antisense antisense MGP_WSBEiJ_T0001933.1 MGP_WSBEiJ_G0001853.1 mouse_genomes_project 6 44117434 44119608 + TEC TEC MGP_WSBEiJ_T0077645.1 MGP_WSBEiJ_G0030214.1 mouse_genomes_project 6 91986689 92005463 + MGP_WSBEiJ_P0077645 Hdac11 protein_coding protein_coding MGP_WSBEiJ_T0077646.1 MGP_WSBEiJ_G0030214.1 mouse_genomes_project 6 91986757 91989655 + Hdac11 protein_coding retained_intron MGP_WSBEiJ_T0077647.1 MGP_WSBEiJ_G0030214.1 mouse_genomes_project 6 91986765 91997317 + MGP_WSBEiJ_P0077647 Hdac11 protein_coding protein_coding MGP_WSBEiJ_T0077648.1 MGP_WSBEiJ_G0030214.1 mouse_genomes_project 6 91987103 91998639 + Hdac11 protein_coding retained_intron MGP_WSBEiJ_T0077649.1 MGP_WSBEiJ_G0030214.1 mouse_genomes_project 6 91996446 92000245 + MGP_WSBEiJ_P0077649 Hdac11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077650.1 MGP_WSBEiJ_G0030214.1 mouse_genomes_project 6 92002547 92004067 + Hdac11 protein_coding retained_intron MGP_WSBEiJ_T0014999.1 MGP_WSBEiJ_G0013129.1 mouse_genomes_project 6 84316422 84316786 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078400.1 MGP_WSBEiJ_G0030358.1 mouse_genomes_project 6 120041911 120104602 - MGP_WSBEiJ_P0078400 Ankrd26 protein_coding protein_coding MGP_WSBEiJ_T0078401.1 MGP_WSBEiJ_G0030358.1 mouse_genomes_project 6 120059386 120064442 - Ankrd26 protein_coding retained_intron MGP_WSBEiJ_T0078402.1 MGP_WSBEiJ_G0030358.1 mouse_genomes_project 6 120084560 120090780 - Ankrd26 protein_coding retained_intron MGP_WSBEiJ_T0010578.1 MGP_WSBEiJ_G0008735.1 mouse_genomes_project 6 25212333 25212429 - Mir592 miRNA miRNA MGP_WSBEiJ_T0014964.1 MGP_WSBEiJ_G0013094.1 mouse_genomes_project 6 67870005 67870730 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098444.1 MGP_WSBEiJ_G0037107.1 mouse_genomes_project 6 122038322 122038427 - Gm24592 snRNA snRNA MGP_WSBEiJ_T0077017.1 MGP_WSBEiJ_G0030090.1 mouse_genomes_project 6 83492881 83495114 - MGP_WSBEiJ_P0077017 Wbp1 protein_coding protein_coding MGP_WSBEiJ_T0077018.1 MGP_WSBEiJ_G0030090.1 mouse_genomes_project 6 83492887 83495402 - MGP_WSBEiJ_P0077018 Wbp1 protein_coding protein_coding MGP_WSBEiJ_T0077019.1 MGP_WSBEiJ_G0030090.1 mouse_genomes_project 6 83492888 83495402 - Wbp1 protein_coding retained_intron MGP_WSBEiJ_T0077020.1 MGP_WSBEiJ_G0030090.1 mouse_genomes_project 6 83493150 83495230 - MGP_WSBEiJ_P0077020 Wbp1 protein_coding protein_coding MGP_WSBEiJ_T0077021.1 MGP_WSBEiJ_G0030090.1 mouse_genomes_project 6 83493393 83494052 - MGP_WSBEiJ_P0077021 Wbp1 protein_coding protein_coding MGP_WSBEiJ_T0077022.1 MGP_WSBEiJ_G0030090.1 mouse_genomes_project 6 83493478 83494721 - Wbp1 protein_coding retained_intron MGP_WSBEiJ_T0077023.1 MGP_WSBEiJ_G0030090.1 mouse_genomes_project 6 83493483 83495102 - Wbp1 protein_coding processed_transcript MGP_WSBEiJ_T0077024.1 MGP_WSBEiJ_G0030090.1 mouse_genomes_project 6 83494402 83495117 - MGP_WSBEiJ_P0077024 Wbp1 protein_coding protein_coding MGP_WSBEiJ_T0100139.1 MGP_WSBEiJ_G0038727.1 mouse_genomes_project 6 149165457 149179960 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100140.1 MGP_WSBEiJ_G0038727.1 mouse_genomes_project 6 149165458 149170103 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100141.1 MGP_WSBEiJ_G0038727.1 mouse_genomes_project 6 149168170 149169912 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100142.1 MGP_WSBEiJ_G0038727.1 mouse_genomes_project 6 149169288 149170029 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0002065.1 MGP_WSBEiJ_G0001985.1 mouse_genomes_project 6 102630321 102631199 - TEC TEC MGP_WSBEiJ_T0077402.1 MGP_WSBEiJ_G0030162.1 mouse_genomes_project 6 88147716 88189674 - Arhgap25 protein_coding retained_intron MGP_WSBEiJ_T0077403.1 MGP_WSBEiJ_G0030162.1 mouse_genomes_project 6 88148588 88228457 - MGP_WSBEiJ_P0077403 Arhgap25 protein_coding protein_coding MGP_WSBEiJ_T0077404.1 MGP_WSBEiJ_G0030162.1 mouse_genomes_project 6 88149103 88228084 - MGP_WSBEiJ_P0077404 Arhgap25 protein_coding protein_coding MGP_WSBEiJ_T0077405.1 MGP_WSBEiJ_G0030162.1 mouse_genomes_project 6 88149298 88152847 - Arhgap25 protein_coding retained_intron MGP_WSBEiJ_T0014800.1 MGP_WSBEiJ_G0012930.1 mouse_genomes_project 6 9675358 9676345 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098434.1 MGP_WSBEiJ_G0037097.1 mouse_genomes_project 6 98808917 98809024 + Gm24565 snRNA snRNA MGP_WSBEiJ_T0011443.1 MGP_WSBEiJ_G0009600.1 mouse_genomes_project 6 50643828 50643930 + Gm27868 misc_RNA misc_RNA MGP_WSBEiJ_T0001930.1 MGP_WSBEiJ_G0001850.1 mouse_genomes_project 6 43957769 43960151 + TEC TEC MGP_WSBEiJ_T0002082.1 MGP_WSBEiJ_G0002002.1 mouse_genomes_project 6 117373776 117374615 - TEC TEC MGP_WSBEiJ_T0014972.1 MGP_WSBEiJ_G0013102.1 mouse_genomes_project 6 71792260 71793054 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079247.1 MGP_WSBEiJ_G0030549.1 mouse_genomes_project 6 135896006 135896936 + MGP_WSBEiJ_P0079247 Tas2r124 protein_coding protein_coding MGP_WSBEiJ_T0079648.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148874365 148939458 + MGP_WSBEiJ_P0079648 Lrmp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079649.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148880484 148939464 + MGP_WSBEiJ_P0079649 Lrmp protein_coding protein_coding MGP_WSBEiJ_T0079650.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148880487 148933342 + Lrmp protein_coding retained_intron MGP_WSBEiJ_T0079651.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148880526 148924326 + Lrmp protein_coding retained_intron MGP_WSBEiJ_T0079652.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148900077 148923718 + MGP_WSBEiJ_P0079652 Lrmp protein_coding protein_coding MGP_WSBEiJ_T0079653.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148907987 148921942 + Lrmp protein_coding retained_intron MGP_WSBEiJ_T0079654.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148907987 148924339 + MGP_WSBEiJ_P0079654 Lrmp protein_coding protein_coding MGP_WSBEiJ_T0079655.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148907990 148939458 + MGP_WSBEiJ_P0079655 Lrmp protein_coding protein_coding MGP_WSBEiJ_T0079656.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148921035 148936243 + Lrmp protein_coding processed_transcript MGP_WSBEiJ_T0079657.1 MGP_WSBEiJ_G0030641.1 mouse_genomes_project 6 148934067 148939208 + Lrmp protein_coding retained_intron MGP_WSBEiJ_T0078453.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121171083 121456711 - MGP_WSBEiJ_P0078453 Erc1 protein_coding protein_coding MGP_WSBEiJ_T0078454.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121171091 121431988 - MGP_WSBEiJ_P0078454 Erc1 protein_coding protein_coding MGP_WSBEiJ_T0078455.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121172917 121456660 - MGP_WSBEiJ_P0078455 Erc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078456.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121173995 121456620 - MGP_WSBEiJ_P0078456 Erc1 protein_coding protein_coding MGP_WSBEiJ_T0078457.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121174844 121456676 - MGP_WSBEiJ_P0078457 Erc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078458.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121175279 121348837 - MGP_WSBEiJ_P0078458 Erc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078459.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121175514 121456695 - MGP_WSBEiJ_P0078459 Erc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078460.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121175584 121456728 - MGP_WSBEiJ_P0078460 Erc1 protein_coding protein_coding MGP_WSBEiJ_T0078461.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121175799 121456650 - MGP_WSBEiJ_P0078461 Erc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078462.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121217638 121222458 - Erc1 protein_coding retained_intron MGP_WSBEiJ_T0078463.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121218783 121432576 - MGP_WSBEiJ_P0078463 Erc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078464.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121326718 121402430 - Erc1 protein_coding processed_transcript MGP_WSBEiJ_T0078465.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121378017 121456663 - MGP_WSBEiJ_P0078465 Erc1 protein_coding protein_coding MGP_WSBEiJ_T0078466.1 MGP_WSBEiJ_G0030366.1 mouse_genomes_project 6 121430746 121433220 - Erc1 protein_coding retained_intron MGP_WSBEiJ_T0076652.1 MGP_WSBEiJ_G0030012.1 mouse_genomes_project 6 66146798 66147831 - MGP_WSBEiJ_P0076652 protein_coding protein_coding MGP_WSBEiJ_T0079352.1 MGP_WSBEiJ_G0030584.1 mouse_genomes_project 6 139030703 139517431 - MGP_WSBEiJ_P0079352 Grin2b protein_coding protein_coding MGP_WSBEiJ_T0079353.1 MGP_WSBEiJ_G0030584.1 mouse_genomes_project 6 139049089 139517409 - MGP_WSBEiJ_P0079353 Grin2b protein_coding protein_coding MGP_WSBEiJ_T0079354.1 MGP_WSBEiJ_G0030584.1 mouse_genomes_project 6 139195520 139517409 - MGP_WSBEiJ_P0079354 Grin2b protein_coding protein_coding MGP_WSBEiJ_T0079355.1 MGP_WSBEiJ_G0030584.1 mouse_genomes_project 6 139380572 139516196 - MGP_WSBEiJ_P0079355 Grin2b protein_coding protein_coding MGP_WSBEiJ_T0079356.1 MGP_WSBEiJ_G0030584.1 mouse_genomes_project 6 139380575 139517243 - MGP_WSBEiJ_P0079356 Grin2b protein_coding protein_coding MGP_WSBEiJ_T0010609.1 MGP_WSBEiJ_G0008766.1 mouse_genomes_project 6 87228103 87228165 - Gm22184 miRNA miRNA MGP_WSBEiJ_T0076543.1 MGP_WSBEiJ_G0029983.1 mouse_genomes_project 6 56840252 56841272 - MGP_WSBEiJ_P0076543 Vmn1r26 protein_coding protein_coding MGP_WSBEiJ_T0004834.1 MGP_WSBEiJ_G0004149.1 mouse_genomes_project 6 18952811 18953898 + Gm42582 antisense antisense MGP_WSBEiJ_T0002124.1 MGP_WSBEiJ_G0002043.1 mouse_genomes_project 6 143159890 143161172 - TEC TEC MGP_WSBEiJ_T0015106.1 MGP_WSBEiJ_G0013236.1 mouse_genomes_project 6 124153987 124154370 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001960.1 MGP_WSBEiJ_G0001880.1 mouse_genomes_project 6 70970563 70971463 - TEC TEC MGP_WSBEiJ_T0078206.1 MGP_WSBEiJ_G0030319.1 mouse_genomes_project 6 116767853 116903332 + MGP_WSBEiJ_P0078206 Pparg protein_coding protein_coding MGP_WSBEiJ_T0078207.1 MGP_WSBEiJ_G0030319.1 mouse_genomes_project 6 116769195 116903327 + MGP_WSBEiJ_P0078207 Pparg protein_coding protein_coding MGP_WSBEiJ_T0078208.1 MGP_WSBEiJ_G0030319.1 mouse_genomes_project 6 116769252 116851528 + MGP_WSBEiJ_P0078208 Pparg protein_coding protein_coding MGP_WSBEiJ_T0078209.1 MGP_WSBEiJ_G0030319.1 mouse_genomes_project 6 116769253 116790555 + Pparg protein_coding retained_intron MGP_WSBEiJ_T0078210.1 MGP_WSBEiJ_G0030319.1 mouse_genomes_project 6 116790430 116875143 + MGP_WSBEiJ_P0078210 Pparg protein_coding protein_coding MGP_WSBEiJ_T0078211.1 MGP_WSBEiJ_G0030319.1 mouse_genomes_project 6 116831237 116903332 + MGP_WSBEiJ_P0078211 Pparg protein_coding protein_coding MGP_WSBEiJ_T0078212.1 MGP_WSBEiJ_G0030319.1 mouse_genomes_project 6 116849945 116875519 + Pparg protein_coding retained_intron MGP_WSBEiJ_T0015028.1 MGP_WSBEiJ_G0013158.1 mouse_genomes_project 6 95820120 95821110 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077884.1 MGP_WSBEiJ_G0030263.1 mouse_genomes_project 6 105847233 106008562 + MGP_WSBEiJ_P0077884 Cntn6 protein_coding protein_coding MGP_WSBEiJ_T0077885.1 MGP_WSBEiJ_G0030263.1 mouse_genomes_project 6 105847497 105932012 + Cntn6 protein_coding retained_intron MGP_WSBEiJ_T0077886.1 MGP_WSBEiJ_G0030263.1 mouse_genomes_project 6 105897180 106236901 + MGP_WSBEiJ_P0077886 Cntn6 protein_coding protein_coding MGP_WSBEiJ_T0017708.1 MGP_WSBEiJ_G0015067.1 mouse_genomes_project 6 124438895 124451534 - Gm16556 processed_transcript processed_transcript MGP_WSBEiJ_T0017709.1 MGP_WSBEiJ_G0015067.1 mouse_genomes_project 6 124438921 124451510 - Gm16556 processed_transcript processed_transcript MGP_WSBEiJ_T0098440.1 MGP_WSBEiJ_G0037103.1 mouse_genomes_project 6 114024740 114024847 - Gm23002 snRNA snRNA MGP_WSBEiJ_T0011444.1 MGP_WSBEiJ_G0009601.1 mouse_genomes_project 6 50643943 50644086 + Gm27477 misc_RNA misc_RNA MGP_WSBEiJ_T0078867.1 MGP_WSBEiJ_G0030447.1 mouse_genomes_project 6 127110622 127117034 + MGP_WSBEiJ_P0078867 Pianp protein_coding protein_coding MGP_WSBEiJ_T0078868.1 MGP_WSBEiJ_G0030447.1 mouse_genomes_project 6 127110799 127117034 + MGP_WSBEiJ_P0078868 Pianp protein_coding protein_coding MGP_WSBEiJ_T0078869.1 MGP_WSBEiJ_G0030447.1 mouse_genomes_project 6 127111012 127113669 + MGP_WSBEiJ_P0078869 Pianp protein_coding protein_coding MGP_WSBEiJ_T0078870.1 MGP_WSBEiJ_G0030447.1 mouse_genomes_project 6 127112374 127117034 + MGP_WSBEiJ_P0078870 Pianp protein_coding protein_coding MGP_WSBEiJ_T0078871.1 MGP_WSBEiJ_G0030447.1 mouse_genomes_project 6 127112547 127116081 + MGP_WSBEiJ_P0078871 Pianp protein_coding protein_coding MGP_WSBEiJ_T0078872.1 MGP_WSBEiJ_G0030447.1 mouse_genomes_project 6 127112576 127113383 + MGP_WSBEiJ_P0078872 Pianp protein_coding protein_coding MGP_WSBEiJ_T0078873.1 MGP_WSBEiJ_G0030447.1 mouse_genomes_project 6 127113599 127114987 + MGP_WSBEiJ_P0078873 Pianp protein_coding protein_coding MGP_WSBEiJ_T0008480.1 MGP_WSBEiJ_G0006860.1 mouse_genomes_project 6 58622573 58626406 - lincRNA lincRNA MGP_WSBEiJ_T0077820.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100064779 100319325 - MGP_WSBEiJ_P0077820 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077821.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100065128 100427016 - MGP_WSBEiJ_P0077821 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077822.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100065132 100602902 - MGP_WSBEiJ_P0077822 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077823.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100065205 100069574 - Foxp1 protein_coding processed_transcript MGP_WSBEiJ_T0077824.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100068976 100690345 - MGP_WSBEiJ_P0077824 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077825.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100319325 - MGP_WSBEiJ_P0077825 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077826.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100168872 - MGP_WSBEiJ_P0077826 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077827.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100319325 - MGP_WSBEiJ_P0077827 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077828.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100602902 - MGP_WSBEiJ_P0077828 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077829.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100602902 - MGP_WSBEiJ_P0077829 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077830.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100319325 - MGP_WSBEiJ_P0077830 Foxp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077831.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100319325 - MGP_WSBEiJ_P0077831 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077832.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100319325 - MGP_WSBEiJ_P0077832 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077833.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069877 100319325 - MGP_WSBEiJ_P0077833 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077834.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100069958 100075327 - Foxp1 protein_coding retained_intron MGP_WSBEiJ_T0077835.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100085312 100168926 - MGP_WSBEiJ_P0077835 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077836.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100091988 100143470 - Foxp1 protein_coding retained_intron MGP_WSBEiJ_T0077837.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100142989 100169565 - MGP_WSBEiJ_P0077837 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077838.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100143182 100187798 - MGP_WSBEiJ_P0077838 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077839.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100146475 100168879 - Foxp1 protein_coding processed_transcript MGP_WSBEiJ_T0077840.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100149753 100246966 - MGP_WSBEiJ_P0077840 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077841.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100149764 100187781 - MGP_WSBEiJ_P0077841 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077842.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100156381 100168604 - MGP_WSBEiJ_P0077842 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077843.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100226182 100408889 - MGP_WSBEiJ_P0077843 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077844.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100308468 100427016 - Foxp1 protein_coding processed_transcript MGP_WSBEiJ_T0077845.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100318246 100427033 - Foxp1 protein_coding retained_intron MGP_WSBEiJ_T0077846.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100318246 100427033 - Foxp1 protein_coding retained_intron MGP_WSBEiJ_T0077847.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100319235 100690510 - MGP_WSBEiJ_P0077847 Foxp1 protein_coding protein_coding MGP_WSBEiJ_T0077849.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100420886 100692032 - Foxp1 protein_coding processed_transcript MGP_WSBEiJ_T0077850.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100470914 100603963 - Foxp1 protein_coding processed_transcript MGP_WSBEiJ_T0077853.1 MGP_WSBEiJ_G0030251.1 mouse_genomes_project 6 100602792 100692106 - Foxp1 protein_coding processed_transcript MGP_WSBEiJ_T0078554.1 MGP_WSBEiJ_G0030380.1 mouse_genomes_project 6 122515810 122550578 + Bcl2l13 protein_coding retained_intron MGP_WSBEiJ_T0078555.1 MGP_WSBEiJ_G0030380.1 mouse_genomes_project 6 122515810 122548325 + MGP_WSBEiJ_P0078555 Bcl2l13 protein_coding protein_coding MGP_WSBEiJ_T0078556.1 MGP_WSBEiJ_G0030380.1 mouse_genomes_project 6 122515824 122559551 + MGP_WSBEiJ_P0078556 Bcl2l13 protein_coding protein_coding MGP_WSBEiJ_T0078557.1 MGP_WSBEiJ_G0030380.1 mouse_genomes_project 6 122515836 122579861 + MGP_WSBEiJ_P0078557 Bcl2l13 protein_coding protein_coding MGP_WSBEiJ_T0077592.1 MGP_WSBEiJ_G0030202.1 mouse_genomes_project 6 91006267 91007389 - MGP_WSBEiJ_P0077592 Vmn1r53 protein_coding protein_coding MGP_WSBEiJ_T0014850.1 MGP_WSBEiJ_G0012980.1 mouse_genomes_project 6 38367775 38368185 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014836.1 MGP_WSBEiJ_G0012966.1 mouse_genomes_project 6 30732305 30733077 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008377.1 MGP_WSBEiJ_G0006790.1 mouse_genomes_project 6 9419918 9459926 + lincRNA lincRNA MGP_WSBEiJ_T0100896.1 MGP_WSBEiJ_G0039354.1 mouse_genomes_project 6 41099299 41099615 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079007.1 MGP_WSBEiJ_G0030475.1 mouse_genomes_project 6 129108370 129152576 - MGP_WSBEiJ_P0079007 Dyrk4 protein_coding protein_coding MGP_WSBEiJ_T0079008.1 MGP_WSBEiJ_G0030475.1 mouse_genomes_project 6 129108543 129117746 - MGP_WSBEiJ_P0079008 Dyrk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079009.1 MGP_WSBEiJ_G0030475.1 mouse_genomes_project 6 129108549 129138129 - Dyrk4 protein_coding processed_transcript MGP_WSBEiJ_T0079261.1 MGP_WSBEiJ_G0030563.1 mouse_genomes_project 6 136272417 136276274 + MGP_WSBEiJ_P0079261 Smim10l1 protein_coding protein_coding MGP_WSBEiJ_T0079262.1 MGP_WSBEiJ_G0030563.1 mouse_genomes_project 6 136272773 136279421 + MGP_WSBEiJ_P0079262 Smim10l1 protein_coding protein_coding MGP_WSBEiJ_T0079263.1 MGP_WSBEiJ_G0030563.1 mouse_genomes_project 6 136272807 136279423 + MGP_WSBEiJ_P0079263 Smim10l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100130.1 MGP_WSBEiJ_G0038722.1 mouse_genomes_project 6 65571884 65593777 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100131.1 MGP_WSBEiJ_G0038722.1 mouse_genomes_project 6 65581158 65594883 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100132.1 MGP_WSBEiJ_G0038722.1 mouse_genomes_project 6 65593544 65594277 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0079010.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129153784 129170372 - MGP_WSBEiJ_P0079010 Rad51ap1 protein_coding protein_coding MGP_WSBEiJ_T0079011.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129154149 129156565 - Rad51ap1 protein_coding retained_intron MGP_WSBEiJ_T0079012.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129154149 129170372 - MGP_WSBEiJ_P0079012 Rad51ap1 protein_coding protein_coding MGP_WSBEiJ_T0079013.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129154913 129156471 - Rad51ap1 protein_coding processed_transcript MGP_WSBEiJ_T0079014.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129155724 129159012 - Rad51ap1 protein_coding retained_intron MGP_WSBEiJ_T0079015.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129157097 129170356 - MGP_WSBEiJ_P0079015 Rad51ap1 protein_coding protein_coding MGP_WSBEiJ_T0079016.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129157113 129158850 - Rad51ap1 protein_coding retained_intron MGP_WSBEiJ_T0079017.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129158386 129170331 - Rad51ap1 protein_coding processed_transcript MGP_WSBEiJ_T0079018.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129158848 129170360 - MGP_WSBEiJ_P0079018 Rad51ap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079019.1 MGP_WSBEiJ_G0030476.1 mouse_genomes_project 6 129159419 129170372 - Rad51ap1 protein_coding retained_intron MGP_WSBEiJ_T0002002.1 MGP_WSBEiJ_G0001922.1 mouse_genomes_project 6 84290758 84292977 + TEC TEC MGP_WSBEiJ_T0099646.1 MGP_WSBEiJ_G0038309.1 mouse_genomes_project 6 47201931 47202061 + Gm24348 snoRNA snoRNA MGP_WSBEiJ_T0001942.1 MGP_WSBEiJ_G0001862.1 mouse_genomes_project 6 49287142 49288108 + TEC TEC MGP_WSBEiJ_T0079437.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141235836 141264859 + Dera protein_coding retained_intron MGP_WSBEiJ_T0079438.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141235836 141242692 + Dera protein_coding processed_transcript MGP_WSBEiJ_T0079439.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141235846 141322213 + MGP_WSBEiJ_P0079439 Dera protein_coding protein_coding MGP_WSBEiJ_T0079440.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141235848 141322652 + MGP_WSBEiJ_P0079440 Dera protein_coding protein_coding MGP_WSBEiJ_T0079441.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141235866 141342455 + MGP_WSBEiJ_P0079441 Dera protein_coding protein_coding MGP_WSBEiJ_T0079442.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141235881 141245912 + Dera protein_coding processed_transcript MGP_WSBEiJ_T0079443.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141235905 141322192 + MGP_WSBEiJ_P0079443 Dera protein_coding protein_coding MGP_WSBEiJ_T0079444.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141242397 141242693 + Dera protein_coding TEC MGP_WSBEiJ_T0079445.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141253993 141265688 + Dera protein_coding processed_transcript MGP_WSBEiJ_T0079446.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141259615 141261283 + Dera protein_coding retained_intron MGP_WSBEiJ_T0079447.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141262456 141322239 + MGP_WSBEiJ_P0079447 Dera protein_coding protein_coding MGP_WSBEiJ_T0079448.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141283611 141297135 + Dera protein_coding processed_transcript MGP_WSBEiJ_T0079449.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141316682 141341927 + MGP_WSBEiJ_P0079449 Dera protein_coding protein_coding MGP_WSBEiJ_T0079450.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141320424 141322838 + Dera protein_coding retained_intron MGP_WSBEiJ_T0079451.1 MGP_WSBEiJ_G0030603.1 mouse_genomes_project 6 141321606 141330255 + MGP_WSBEiJ_P0079451 Dera protein_coding protein_coding MGP_WSBEiJ_T0100935.1 MGP_WSBEiJ_G0039392.1 mouse_genomes_project 6 131555129 131555969 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0075466.1 MGP_WSBEiJ_G0029706.1 mouse_genomes_project 6 27296883 27339807 + MGP_WSBEiJ_P0075466 Strip2 protein_coding protein_coding MGP_WSBEiJ_T0075467.1 MGP_WSBEiJ_G0029706.1 mouse_genomes_project 6 27296884 27325871 + Strip2 protein_coding retained_intron MGP_WSBEiJ_T0075468.1 MGP_WSBEiJ_G0029706.1 mouse_genomes_project 6 27296884 27337899 + Strip2 protein_coding retained_intron MGP_WSBEiJ_T0075469.1 MGP_WSBEiJ_G0029706.1 mouse_genomes_project 6 27296884 27327397 + MGP_WSBEiJ_P0075469 Strip2 protein_coding protein_coding MGP_WSBEiJ_T0075470.1 MGP_WSBEiJ_G0029706.1 mouse_genomes_project 6 27296884 27339813 + MGP_WSBEiJ_P0075470 Strip2 protein_coding protein_coding MGP_WSBEiJ_T0005022.1 MGP_WSBEiJ_G0004283.1 mouse_genomes_project 6 137465752 137476319 - Gm17089 antisense antisense MGP_WSBEiJ_T0010607.1 MGP_WSBEiJ_G0008764.1 mouse_genomes_project 6 83790097 83790204 - Mir6374 miRNA miRNA MGP_WSBEiJ_T0078051.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114848528 114858910 + MGP_WSBEiJ_P0078051 Ttll3 protein_coding protein_coding MGP_WSBEiJ_T0078052.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114850005 114858310 + Ttll3 protein_coding processed_transcript MGP_WSBEiJ_T0078053.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114851736 114873927 + MGP_WSBEiJ_P0078053 Ttll3 protein_coding protein_coding MGP_WSBEiJ_T0078054.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114851775 114873909 + MGP_WSBEiJ_P0078054 Ttll3 protein_coding protein_coding MGP_WSBEiJ_T0078055.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114852438 114873923 + MGP_WSBEiJ_P0078055 Ttll3 protein_coding protein_coding MGP_WSBEiJ_T0078056.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114852455 114869285 + MGP_WSBEiJ_P0078056 Ttll3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078057.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114857196 114873902 + Ttll3 protein_coding retained_intron MGP_WSBEiJ_T0078058.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114868591 114869285 + Ttll3 protein_coding processed_transcript MGP_WSBEiJ_T0078059.1 MGP_WSBEiJ_G0030292.1 mouse_genomes_project 6 114872170 114873898 + Ttll3 protein_coding processed_transcript MGP_WSBEiJ_T0004837.1 MGP_WSBEiJ_G0004151.1 mouse_genomes_project 6 26665465 26665873 - Gm17172 antisense antisense MGP_WSBEiJ_T0014863.1 MGP_WSBEiJ_G0012993.1 mouse_genomes_project 6 42814077 42814974 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098457.1 MGP_WSBEiJ_G0037120.1 mouse_genomes_project 6 139767154 139767239 + Gm25882 snRNA snRNA MGP_WSBEiJ_T0011461.1 MGP_WSBEiJ_G0009618.1 mouse_genomes_project 6 100751075 100751322 + Gm24936 misc_RNA misc_RNA MGP_WSBEiJ_T0097082.1 MGP_WSBEiJ_G0035763.1 mouse_genomes_project 6 59346562 59346681 + n-R5s162 rRNA rRNA MGP_WSBEiJ_T0014796.1 MGP_WSBEiJ_G0012926.1 mouse_genomes_project 6 7612439 7613340 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078220.1 MGP_WSBEiJ_G0030322.1 mouse_genomes_project 6 117028476 117049203 + MGP_WSBEiJ_P0078220 Mkrn2 protein_coding protein_coding MGP_WSBEiJ_T0078221.1 MGP_WSBEiJ_G0030322.1 mouse_genomes_project 6 117028515 117039991 + Mkrn2 protein_coding processed_transcript MGP_WSBEiJ_T0078222.1 MGP_WSBEiJ_G0030322.1 mouse_genomes_project 6 117037912 117038972 + Mkrn2 protein_coding retained_intron MGP_WSBEiJ_T0005555.1 MGP_WSBEiJ_G0004673.1 mouse_genomes_project 6 139874551 139879112 - Gm44140 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0100936.1 MGP_WSBEiJ_G0039393.1 mouse_genomes_project 6 132390208 132400780 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010614.1 MGP_WSBEiJ_G0008771.1 mouse_genomes_project 6 95823316 95823414 + Gm23364 miRNA miRNA MGP_WSBEiJ_T0008389.1 MGP_WSBEiJ_G0006799.1 mouse_genomes_project 6 19092348 19180005 - Gm26719 lincRNA lincRNA MGP_WSBEiJ_T0014871.1 MGP_WSBEiJ_G0013001.1 mouse_genomes_project 6 46198380 46199254 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005010.1 MGP_WSBEiJ_G0004274.1 mouse_genomes_project 6 129386442 129453121 + 9330179D12Rik antisense antisense MGP_WSBEiJ_T0005011.1 MGP_WSBEiJ_G0004274.1 mouse_genomes_project 6 129386679 129453413 + 9330179D12Rik antisense antisense MGP_WSBEiJ_T0015020.1 MGP_WSBEiJ_G0013150.1 mouse_genomes_project 6 93164436 93164915 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000278.1 MGP_WSBEiJ_G0000226.1 mouse_genomes_project 6 67888256 67888558 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0002121.1 MGP_WSBEiJ_G0002040.1 mouse_genomes_project 6 140582328 140583383 - TEC TEC MGP_WSBEiJ_T0077678.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92545003 92629843 + MGP_WSBEiJ_P0077678 Slc6a6 protein_coding protein_coding MGP_WSBEiJ_T0077679.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92545019 92605961 + Slc6a6 protein_coding processed_transcript MGP_WSBEiJ_T0077680.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92545045 92597742 + Slc6a6 protein_coding retained_intron MGP_WSBEiJ_T0077681.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92545070 92595753 + MGP_WSBEiJ_P0077681 Slc6a6 protein_coding protein_coding MGP_WSBEiJ_T0077682.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92545078 92595788 + MGP_WSBEiJ_P0077682 Slc6a6 protein_coding protein_coding MGP_WSBEiJ_T0077683.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92545099 92560208 + Slc6a6 protein_coding retained_intron MGP_WSBEiJ_T0077684.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92562548 92595674 + MGP_WSBEiJ_P0077684 Slc6a6 protein_coding protein_coding MGP_WSBEiJ_T0077685.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92595769 92615815 + MGP_WSBEiJ_P0077685 Slc6a6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077686.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92610437 92611885 + Slc6a6 protein_coding retained_intron MGP_WSBEiJ_T0077687.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92619150 92620947 + Slc6a6 protein_coding retained_intron MGP_WSBEiJ_T0077688.1 MGP_WSBEiJ_G0030221.1 mouse_genomes_project 6 92620960 92623555 + Slc6a6 protein_coding retained_intron MGP_WSBEiJ_T0015190.1 MGP_WSBEiJ_G0013320.1 mouse_genomes_project 6 151088862 151089675 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078021.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114758759 114777466 + MGP_WSBEiJ_P0078021 Brpf1 protein_coding protein_coding MGP_WSBEiJ_T0078022.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114758788 114777309 + MGP_WSBEiJ_P0078022 Brpf1 protein_coding protein_coding MGP_WSBEiJ_T0078023.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114758814 114777469 + MGP_WSBEiJ_P0078023 Brpf1 protein_coding protein_coding MGP_WSBEiJ_T0078024.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114758814 114777328 + MGP_WSBEiJ_P0078024 Brpf1 protein_coding protein_coding MGP_WSBEiJ_T0078025.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114758846 114777450 + MGP_WSBEiJ_P0078025 Brpf1 protein_coding protein_coding MGP_WSBEiJ_T0078026.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114758935 114777230 + MGP_WSBEiJ_P0078026 Brpf1 protein_coding protein_coding MGP_WSBEiJ_T0078027.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114759051 114777331 + MGP_WSBEiJ_P0078027 Brpf1 protein_coding protein_coding MGP_WSBEiJ_T0078028.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114769457 114770753 + Brpf1 protein_coding retained_intron MGP_WSBEiJ_T0078029.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114772686 114774913 + Brpf1 protein_coding retained_intron MGP_WSBEiJ_T0078030.1 MGP_WSBEiJ_G0030287.1 mouse_genomes_project 6 114772844 114777309 + Brpf1 protein_coding retained_intron MGP_WSBEiJ_T0005003.1 MGP_WSBEiJ_G0004268.1 mouse_genomes_project 6 127124973 127168152 - Gm43989 antisense antisense MGP_WSBEiJ_T0097084.1 MGP_WSBEiJ_G0035765.1 mouse_genomes_project 6 90002217 90002352 - Gm25961 rRNA rRNA MGP_WSBEiJ_T0002138.1 MGP_WSBEiJ_G0002057.1 mouse_genomes_project 6 150551382 150552533 + TEC TEC MGP_WSBEiJ_T0002035.1 MGP_WSBEiJ_G0001955.1 mouse_genomes_project 6 91199548 91201922 + TEC TEC MGP_WSBEiJ_T0001958.1 MGP_WSBEiJ_G0001878.1 mouse_genomes_project 6 61222348 61224380 + TEC TEC MGP_WSBEiJ_T0076996.1 MGP_WSBEiJ_G0030082.1 mouse_genomes_project 6 83430070 83438742 + MGP_WSBEiJ_P0076996 protein_coding unknown_likely_coding MGP_WSBEiJ_T0076997.1 MGP_WSBEiJ_G0030082.1 mouse_genomes_project 6 83430236 83432128 + MGP_WSBEiJ_P0076997 protein_coding non_stop_decay MGP_WSBEiJ_T0076034.1 MGP_WSBEiJ_G0029852.1 mouse_genomes_project 6 41280668 41304411 + MGP_WSBEiJ_P0076034 Arhgef5 protein_coding protein_coding MGP_WSBEiJ_T0076035.1 MGP_WSBEiJ_G0029852.1 mouse_genomes_project 6 41289619 41304410 + MGP_WSBEiJ_P0076035 Arhgef5 protein_coding protein_coding MGP_WSBEiJ_T0076036.1 MGP_WSBEiJ_G0029852.1 mouse_genomes_project 6 41292046 41295035 + Arhgef5 protein_coding retained_intron MGP_WSBEiJ_T0076037.1 MGP_WSBEiJ_G0029852.1 mouse_genomes_project 6 41292155 41302288 + Arhgef5 protein_coding retained_intron MGP_WSBEiJ_T0076038.1 MGP_WSBEiJ_G0029852.1 mouse_genomes_project 6 41294569 41304407 + Arhgef5 protein_coding retained_intron MGP_WSBEiJ_T0076039.1 MGP_WSBEiJ_G0029852.1 mouse_genomes_project 6 41296099 41298676 + Arhgef5 protein_coding retained_intron MGP_WSBEiJ_T0076040.1 MGP_WSBEiJ_G0029852.1 mouse_genomes_project 6 41297723 41304406 + Arhgef5 protein_coding retained_intron MGP_WSBEiJ_T0076041.1 MGP_WSBEiJ_G0029852.1 mouse_genomes_project 6 41297991 41299132 + Arhgef5 protein_coding retained_intron MGP_WSBEiJ_T0002057.1 MGP_WSBEiJ_G0001977.1 mouse_genomes_project 6 101485356 101486446 - TEC TEC MGP_WSBEiJ_T0078152.1 MGP_WSBEiJ_G0030311.1 mouse_genomes_project 6 115783804 115819097 + MGP_WSBEiJ_P0078152 Slc6a1 protein_coding protein_coding MGP_WSBEiJ_T0078153.1 MGP_WSBEiJ_G0030311.1 mouse_genomes_project 6 115783993 115808683 + Slc6a1 protein_coding retained_intron MGP_WSBEiJ_T0078154.1 MGP_WSBEiJ_G0030311.1 mouse_genomes_project 6 115783993 115814099 + Slc6a1 protein_coding retained_intron MGP_WSBEiJ_T0078155.1 MGP_WSBEiJ_G0030311.1 mouse_genomes_project 6 115801590 115803519 + Slc6a1 protein_coding processed_transcript MGP_WSBEiJ_T0078156.1 MGP_WSBEiJ_G0030311.1 mouse_genomes_project 6 115802811 115803519 + Slc6a1 protein_coding retained_intron MGP_WSBEiJ_T0078157.1 MGP_WSBEiJ_G0030311.1 mouse_genomes_project 6 115814850 115817169 + Slc6a1 protein_coding retained_intron MGP_WSBEiJ_T0098412.1 MGP_WSBEiJ_G0037075.1 mouse_genomes_project 6 37014659 37014764 - Gm26008 snRNA snRNA MGP_WSBEiJ_T0010622.1 MGP_WSBEiJ_G0008779.1 mouse_genomes_project 6 114991246 114991371 - Gm23365 miRNA miRNA MGP_WSBEiJ_T0001914.1 MGP_WSBEiJ_G0001834.1 mouse_genomes_project 6 38054762 38057590 + TEC TEC MGP_WSBEiJ_T0077284.1 MGP_WSBEiJ_G0030140.1 mouse_genomes_project 6 86817557 86902484 + MGP_WSBEiJ_P0077284 Tgfa protein_coding protein_coding MGP_WSBEiJ_T0077285.1 MGP_WSBEiJ_G0030140.1 mouse_genomes_project 6 86817585 86832278 + Tgfa protein_coding processed_transcript MGP_WSBEiJ_T0077286.1 MGP_WSBEiJ_G0030140.1 mouse_genomes_project 6 86817724 86898795 + MGP_WSBEiJ_P0077286 Tgfa protein_coding protein_coding MGP_WSBEiJ_T0077287.1 MGP_WSBEiJ_G0030140.1 mouse_genomes_project 6 86837500 86898985 + Tgfa protein_coding processed_transcript MGP_WSBEiJ_T0002631.1 MGP_WSBEiJ_G0002519.1 mouse_genomes_project 6 39097316 39097805 + MGP_WSBEiJ_P0002631 Trbv26 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002632.1 MGP_WSBEiJ_G0002519.1 mouse_genomes_project 6 39097336 39097805 + MGP_WSBEiJ_P0002632 Trbv26 TR_V_gene TR_V_gene MGP_WSBEiJ_T0001944.1 MGP_WSBEiJ_G0001864.1 mouse_genomes_project 6 50789091 50789819 + TEC TEC MGP_WSBEiJ_T0001984.1 MGP_WSBEiJ_G0001904.1 mouse_genomes_project 6 77792792 77794279 - TEC TEC MGP_WSBEiJ_T0014957.1 MGP_WSBEiJ_G0013087.1 mouse_genomes_project 6 67140690 67140854 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002093.1 MGP_WSBEiJ_G0002012.1 mouse_genomes_project 6 124716665 124719029 + TEC TEC MGP_WSBEiJ_T0015006.1 MGP_WSBEiJ_G0013136.1 mouse_genomes_project 6 85641636 85642576 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002675.1 MGP_WSBEiJ_G0002559.1 mouse_genomes_project 6 39087012 39087479 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0079536.1 MGP_WSBEiJ_G0030619.1 mouse_genomes_project 6 145378113 145439185 - MGP_WSBEiJ_P0079536 Gm5724 protein_coding protein_coding MGP_WSBEiJ_T0100931.1 MGP_WSBEiJ_G0039389.1 mouse_genomes_project 6 126168639 126194191 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005038.1 MGP_WSBEiJ_G0004297.1 mouse_genomes_project 6 147712064 147713935 + Sox5os1 antisense antisense MGP_WSBEiJ_T0010600.1 MGP_WSBEiJ_G0008757.1 mouse_genomes_project 6 54849592 54849696 - Gm44413 miRNA miRNA MGP_WSBEiJ_T0076032.1 MGP_WSBEiJ_G0029851.1 mouse_genomes_project 6 41230151 41231211 + MGP_WSBEiJ_P0076032 Olfr47 protein_coding protein_coding MGP_WSBEiJ_T0008379.1 MGP_WSBEiJ_G0006792.1 mouse_genomes_project 6 10725416 10907242 + lincRNA lincRNA MGP_WSBEiJ_T0008380.1 MGP_WSBEiJ_G0006792.1 mouse_genomes_project 6 10725459 10748537 + lincRNA lincRNA MGP_WSBEiJ_T0075775.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36135162 36217125 + MGP_WSBEiJ_P0075775 Ubn2 protein_coding protein_coding MGP_WSBEiJ_T0075776.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36135385 36207233 + MGP_WSBEiJ_P0075776 Ubn2 protein_coding protein_coding MGP_WSBEiJ_T0075777.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36141742 36230326 + MGP_WSBEiJ_P0075777 Ubn2 protein_coding protein_coding MGP_WSBEiJ_T0075778.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36167474 36168254 + Ubn2 protein_coding retained_intron MGP_WSBEiJ_T0075779.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36168412 36189528 + Ubn2 protein_coding retained_intron MGP_WSBEiJ_T0075780.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36187821 36192129 + Ubn2 protein_coding retained_intron MGP_WSBEiJ_T0075781.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36187919 36193013 + Ubn2 protein_coding processed_transcript MGP_WSBEiJ_T0075782.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36188766 36207233 + Ubn2 protein_coding retained_intron MGP_WSBEiJ_T0075783.1 MGP_WSBEiJ_G0029760.1 mouse_genomes_project 6 36195672 36230360 + MGP_WSBEiJ_P0075783 Ubn2 protein_coding protein_coding MGP_WSBEiJ_T0014939.1 MGP_WSBEiJ_G0013069.1 mouse_genomes_project 6 65280196 65281772 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099634.1 MGP_WSBEiJ_G0038297.1 mouse_genomes_project 6 18080076 18080207 - Gm23960 snoRNA snoRNA MGP_WSBEiJ_T0001978.1 MGP_WSBEiJ_G0001898.1 mouse_genomes_project 6 77516034 77516891 - TEC TEC MGP_WSBEiJ_T0099667.1 MGP_WSBEiJ_G0038330.1 mouse_genomes_project 6 94270900 94271031 - Gm25094 snoRNA snoRNA MGP_WSBEiJ_T0017680.1 MGP_WSBEiJ_G0015055.1 mouse_genomes_project 6 56358107 56397057 + processed_transcript processed_transcript MGP_WSBEiJ_T0076576.1 MGP_WSBEiJ_G0029992.1 mouse_genomes_project 6 57930869 58022198 - MGP_WSBEiJ_P0076576 Fam13a protein_coding protein_coding MGP_WSBEiJ_T0076577.1 MGP_WSBEiJ_G0029992.1 mouse_genomes_project 6 57934364 58021989 - MGP_WSBEiJ_P0076577 Fam13a protein_coding protein_coding MGP_WSBEiJ_T0076578.1 MGP_WSBEiJ_G0029992.1 mouse_genomes_project 6 57972984 58022071 - Fam13a protein_coding processed_transcript MGP_WSBEiJ_T0076579.1 MGP_WSBEiJ_G0029992.1 mouse_genomes_project 6 58001960 58022153 - Fam13a protein_coding retained_intron MGP_WSBEiJ_T0076580.1 MGP_WSBEiJ_G0029992.1 mouse_genomes_project 6 58017783 58022092 - Fam13a protein_coding retained_intron MGP_WSBEiJ_T0098450.1 MGP_WSBEiJ_G0037113.1 mouse_genomes_project 6 132528144 132528218 + Gm23977 snRNA snRNA MGP_WSBEiJ_T0077009.1 MGP_WSBEiJ_G0030086.1 mouse_genomes_project 6 83475720 83482243 + MGP_WSBEiJ_P0077009 protein_coding protein_coding MGP_WSBEiJ_T0077011.1 MGP_WSBEiJ_G0030086.1 mouse_genomes_project 6 83475777 83477974 + protein_coding retained_intron MGP_WSBEiJ_T0077012.1 MGP_WSBEiJ_G0030086.1 mouse_genomes_project 6 83480949 83481683 + protein_coding retained_intron MGP_WSBEiJ_T0099642.1 MGP_WSBEiJ_G0038305.1 mouse_genomes_project 6 37203860 37203991 - Gm25402 snoRNA snoRNA MGP_WSBEiJ_T0076021.1 MGP_WSBEiJ_G0029842.1 mouse_genomes_project 6 40882054 40882987 + MGP_WSBEiJ_P0076021 Olfr447 protein_coding protein_coding MGP_WSBEiJ_T0001932.1 MGP_WSBEiJ_G0001852.1 mouse_genomes_project 6 44112060 44115999 + TEC TEC MGP_WSBEiJ_T0015178.1 MGP_WSBEiJ_G0013308.1 mouse_genomes_project 6 143640540 143641045 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079284.1 MGP_WSBEiJ_G0030569.1 mouse_genomes_project 6 137859138 137886011 - MGP_WSBEiJ_P0079284 Mansc1 protein_coding protein_coding MGP_WSBEiJ_T0100911.1 MGP_WSBEiJ_G0039369.1 mouse_genomes_project 6 57447421 57448346 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079234.1 MGP_WSBEiJ_G0030538.1 mouse_genomes_project 6 134633385 134634294 - MGP_WSBEiJ_P0079234 Tas2r104 protein_coding protein_coding MGP_WSBEiJ_T0000280.1 MGP_WSBEiJ_G0000228.1 mouse_genomes_project 6 68104318 68104605 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0014881.1 MGP_WSBEiJ_G0013011.1 mouse_genomes_project 6 47345131 47345438 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076081.1 MGP_WSBEiJ_G0029859.1 mouse_genomes_project 6 46032656 46046091 - MGP_WSBEiJ_P0076081 Zfp786 protein_coding protein_coding MGP_WSBEiJ_T0076082.1 MGP_WSBEiJ_G0029859.1 mouse_genomes_project 6 46035048 46045792 - Zfp786 protein_coding processed_transcript MGP_WSBEiJ_T0076083.1 MGP_WSBEiJ_G0029859.1 mouse_genomes_project 6 46043375 46045728 - Zfp786 protein_coding retained_intron MGP_WSBEiJ_T0078302.1 MGP_WSBEiJ_G0030336.1 mouse_genomes_project 6 117748684 117796190 + MGP_WSBEiJ_P0078302 Zfand4 protein_coding protein_coding MGP_WSBEiJ_T0005028.1 MGP_WSBEiJ_G0004289.1 mouse_genomes_project 6 139202112 139211687 + Gm14330 antisense antisense MGP_WSBEiJ_T0078845.1 MGP_WSBEiJ_G0030443.1 mouse_genomes_project 6 127013403 127022140 - MGP_WSBEiJ_P0078845 Lag3 protein_coding protein_coding MGP_WSBEiJ_T0078846.1 MGP_WSBEiJ_G0030443.1 mouse_genomes_project 6 127019034 127020486 - Lag3 protein_coding processed_transcript MGP_WSBEiJ_T0077958.1 MGP_WSBEiJ_G0030279.1 mouse_genomes_project 6 113891849 113909054 - MGP_WSBEiJ_P0077958 Oxtr protein_coding protein_coding MGP_WSBEiJ_T0077959.1 MGP_WSBEiJ_G0030279.1 mouse_genomes_project 6 113891853 113907505 - MGP_WSBEiJ_P0077959 Oxtr protein_coding protein_coding MGP_WSBEiJ_T0015192.1 MGP_WSBEiJ_G0013322.1 mouse_genomes_project 6 152561927 152562535 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077574.1 MGP_WSBEiJ_G0030190.1 mouse_genomes_project 6 90403815 90435412 + MGP_WSBEiJ_P0077574 Txnrd3 protein_coding protein_coding MGP_WSBEiJ_T0077575.1 MGP_WSBEiJ_G0030190.1 mouse_genomes_project 6 90403815 90435412 + MGP_WSBEiJ_P0077575 Txnrd3 protein_coding protein_coding MGP_WSBEiJ_T0002084.1 MGP_WSBEiJ_G0002004.1 mouse_genomes_project 6 117864926 117865867 + TEC TEC MGP_WSBEiJ_T0078326.1 MGP_WSBEiJ_G0030339.1 mouse_genomes_project 6 117965193 117971071 + MGP_WSBEiJ_P0078326 Olfr211 protein_coding protein_coding MGP_WSBEiJ_T0078327.1 MGP_WSBEiJ_G0030339.1 mouse_genomes_project 6 117970141 117971071 + MGP_WSBEiJ_P0078327 Olfr211 protein_coding protein_coding MGP_WSBEiJ_T0075001.1 MGP_WSBEiJ_G0029614.1 mouse_genomes_project 6 3675046 3678663 + MGP_WSBEiJ_P0075001 protein_coding protein_coding MGP_WSBEiJ_T0075002.1 MGP_WSBEiJ_G0029614.1 mouse_genomes_project 6 3675132 3676765 + protein_coding retained_intron MGP_WSBEiJ_T0010610.1 MGP_WSBEiJ_G0008767.1 mouse_genomes_project 6 88691511 88691639 - miRNA miRNA MGP_WSBEiJ_T0008415.1 MGP_WSBEiJ_G0006815.1 mouse_genomes_project 6 29105535 29116500 + lincRNA lincRNA MGP_WSBEiJ_T0014922.1 MGP_WSBEiJ_G0013052.1 mouse_genomes_project 6 62091380 62091906 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014960.1 MGP_WSBEiJ_G0013090.1 mouse_genomes_project 6 67634900 67635577 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079624.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147516102 147909467 - MGP_WSBEiJ_P0079624 Sox5 protein_coding protein_coding MGP_WSBEiJ_T0079625.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147516102 147909400 - MGP_WSBEiJ_P0079625 Sox5 protein_coding protein_coding MGP_WSBEiJ_T0079626.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147519783 147909467 - MGP_WSBEiJ_P0079626 Sox5 protein_coding protein_coding MGP_WSBEiJ_T0079627.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147521011 147634758 - MGP_WSBEiJ_P0079627 Sox5 protein_coding protein_coding MGP_WSBEiJ_T0079628.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147521146 147909372 - MGP_WSBEiJ_P0079628 Sox5 protein_coding protein_coding MGP_WSBEiJ_T0079629.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147527328 147634753 - Sox5 protein_coding processed_transcript MGP_WSBEiJ_T0079630.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147531357 148523899 - Sox5 protein_coding retained_intron MGP_WSBEiJ_T0079631.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147532453 147634749 - MGP_WSBEiJ_P0079631 Sox5 protein_coding protein_coding MGP_WSBEiJ_T0079632.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147548848 147634740 - MGP_WSBEiJ_P0079632 Sox5 protein_coding protein_coding MGP_WSBEiJ_T0079633.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147590187 147904346 - Sox5 protein_coding retained_intron MGP_WSBEiJ_T0079634.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147711296 147909400 - Sox5 protein_coding retained_intron MGP_WSBEiJ_T0079635.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147798923 148523841 - Sox5 protein_coding processed_transcript MGP_WSBEiJ_T0079636.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147811976 147903976 - Sox5 protein_coding processed_transcript MGP_WSBEiJ_T0079637.1 MGP_WSBEiJ_G0030639.1 mouse_genomes_project 6 147851636 147909467 - Sox5 protein_coding retained_intron MGP_WSBEiJ_T0010627.1 MGP_WSBEiJ_G0008784.1 mouse_genomes_project 6 119619113 119619185 + Mir7044 miRNA miRNA MGP_WSBEiJ_T0000270.1 MGP_WSBEiJ_G0000218.1 mouse_genomes_project 6 40938243 40938700 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0001971.1 MGP_WSBEiJ_G0001891.1 mouse_genomes_project 6 72634080 72637492 - TEC TEC MGP_WSBEiJ_T0075085.1 MGP_WSBEiJ_G0029633.1 mouse_genomes_project 6 10423582 10452373 - MGP_WSBEiJ_P0075085 Tmem168 protein_coding protein_coding MGP_WSBEiJ_T0075086.1 MGP_WSBEiJ_G0029633.1 mouse_genomes_project 6 10423585 10452293 - MGP_WSBEiJ_P0075086 Tmem168 protein_coding protein_coding MGP_WSBEiJ_T0075087.1 MGP_WSBEiJ_G0029633.1 mouse_genomes_project 6 10447655 10452021 - Tmem168 protein_coding processed_transcript MGP_WSBEiJ_T0075088.1 MGP_WSBEiJ_G0029633.1 mouse_genomes_project 6 10447671 10452278 - Tmem168 protein_coding processed_transcript MGP_WSBEiJ_T0075089.1 MGP_WSBEiJ_G0029633.1 mouse_genomes_project 6 10450208 10452317 - Tmem168 protein_coding processed_transcript MGP_WSBEiJ_T0075090.1 MGP_WSBEiJ_G0029633.1 mouse_genomes_project 6 10450870 10452292 - Tmem168 protein_coding processed_transcript MGP_WSBEiJ_T0075091.1 MGP_WSBEiJ_G0029633.1 mouse_genomes_project 6 10451559 10452300 - Tmem168 protein_coding processed_transcript MGP_WSBEiJ_T0015104.1 MGP_WSBEiJ_G0013234.1 mouse_genomes_project 6 123726240 123726372 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005016.1 MGP_WSBEiJ_G0004279.1 mouse_genomes_project 6 130813162 130852489 + Gm10069 antisense antisense MGP_WSBEiJ_T0005017.1 MGP_WSBEiJ_G0004279.1 mouse_genomes_project 6 130813747 130886287 + Gm10069 antisense antisense MGP_WSBEiJ_T0005018.1 MGP_WSBEiJ_G0004279.1 mouse_genomes_project 6 130850464 130869686 + Gm10069 antisense antisense MGP_WSBEiJ_T0002133.1 MGP_WSBEiJ_G0002052.1 mouse_genomes_project 6 149005414 149007975 - TEC TEC MGP_WSBEiJ_T0075613.1 MGP_WSBEiJ_G0029728.1 mouse_genomes_project 6 31550324 31659530 + MGP_WSBEiJ_P0075613 Lrguk protein_coding protein_coding MGP_WSBEiJ_T0075614.1 MGP_WSBEiJ_G0029728.1 mouse_genomes_project 6 31550326 31569135 + MGP_WSBEiJ_P0075614 Lrguk protein_coding protein_coding MGP_WSBEiJ_T0075615.1 MGP_WSBEiJ_G0029728.1 mouse_genomes_project 6 31550352 31629277 + MGP_WSBEiJ_P0075615 Lrguk protein_coding unknown_likely_coding MGP_WSBEiJ_T0075616.1 MGP_WSBEiJ_G0029728.1 mouse_genomes_project 6 31560229 31569150 + MGP_WSBEiJ_P0075616 Lrguk protein_coding protein_coding MGP_WSBEiJ_T0011471.1 MGP_WSBEiJ_G0009628.1 mouse_genomes_project 6 144146804 144147057 + Gm25780 misc_RNA misc_RNA MGP_WSBEiJ_T0004993.1 MGP_WSBEiJ_G0004258.1 mouse_genomes_project 6 122181056 122181819 + Gm20692 antisense antisense MGP_WSBEiJ_T0076773.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71833268 71880586 + MGP_WSBEiJ_P0076773 Polr1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076774.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71833276 71902502 + MGP_WSBEiJ_P0076774 Polr1a protein_coding protein_coding MGP_WSBEiJ_T0076775.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71833284 71846111 + Polr1a protein_coding retained_intron MGP_WSBEiJ_T0076776.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71836619 71880471 + Polr1a protein_coding retained_intron MGP_WSBEiJ_T0076777.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71850751 71851369 + Polr1a protein_coding retained_intron MGP_WSBEiJ_T0076778.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71855828 71856420 + Polr1a protein_coding retained_intron MGP_WSBEiJ_T0076779.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71860639 71866989 + Polr1a protein_coding processed_transcript MGP_WSBEiJ_T0076780.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71873794 71880272 + MGP_WSBEiJ_P0076780 Polr1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076781.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71873795 71875189 + Polr1a protein_coding retained_intron MGP_WSBEiJ_T0076782.1 MGP_WSBEiJ_G0030037.1 mouse_genomes_project 6 71881641 71904961 + MGP_WSBEiJ_P0076782 Polr1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002524.1 MGP_WSBEiJ_G0002432.1 mouse_genomes_project 6 39432345 39432394 + MGP_WSBEiJ_P0002524 Trbj2-4 TR_J_gene TR_J_gene MGP_WSBEiJ_T0015025.1 MGP_WSBEiJ_G0013155.1 mouse_genomes_project 6 95326328 95326719 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079720.1 MGP_WSBEiJ_G0030652.1 mouse_genomes_project 6 150376007 150392691 + MGP_WSBEiJ_P0079720 Fgfr1op2 protein_coding protein_coding MGP_WSBEiJ_T0079721.1 MGP_WSBEiJ_G0030652.1 mouse_genomes_project 6 150376667 150399767 + MGP_WSBEiJ_P0079721 Fgfr1op2 protein_coding protein_coding MGP_WSBEiJ_T0079722.1 MGP_WSBEiJ_G0030652.1 mouse_genomes_project 6 150376667 150399767 + MGP_WSBEiJ_P0079722 Fgfr1op2 protein_coding protein_coding MGP_WSBEiJ_T0079723.1 MGP_WSBEiJ_G0030652.1 mouse_genomes_project 6 150376729 150392691 + MGP_WSBEiJ_P0079723 Fgfr1op2 protein_coding protein_coding MGP_WSBEiJ_T0079724.1 MGP_WSBEiJ_G0030652.1 mouse_genomes_project 6 150376748 150389825 + Fgfr1op2 protein_coding processed_transcript MGP_WSBEiJ_T0079725.1 MGP_WSBEiJ_G0030652.1 mouse_genomes_project 6 150376750 150387117 + Fgfr1op2 protein_coding retained_intron MGP_WSBEiJ_T0079726.1 MGP_WSBEiJ_G0030652.1 mouse_genomes_project 6 150388128 150397110 + Fgfr1op2 protein_coding processed_transcript MGP_WSBEiJ_T0008383.1 MGP_WSBEiJ_G0006795.1 mouse_genomes_project 6 14154771 14162671 + D830026I12Rik lincRNA lincRNA MGP_WSBEiJ_T0008384.1 MGP_WSBEiJ_G0006795.1 mouse_genomes_project 6 14155131 14163577 + D830026I12Rik lincRNA lincRNA MGP_WSBEiJ_T0008385.1 MGP_WSBEiJ_G0006795.1 mouse_genomes_project 6 14155146 14168024 + D830026I12Rik lincRNA lincRNA MGP_WSBEiJ_T0011420.1 MGP_WSBEiJ_G0009577.1 mouse_genomes_project 6 3629939 3630146 + Gm27905 misc_RNA misc_RNA MGP_WSBEiJ_T0076536.1 MGP_WSBEiJ_G0029978.1 mouse_genomes_project 6 56626348 56627384 - MGP_WSBEiJ_P0076536 Vmn1r21 protein_coding protein_coding MGP_WSBEiJ_T0076537.1 MGP_WSBEiJ_G0029978.1 mouse_genomes_project 6 56627020 56633092 - MGP_WSBEiJ_P0076537 Vmn1r21 protein_coding protein_coding MGP_WSBEiJ_T0076538.1 MGP_WSBEiJ_G0029978.1 mouse_genomes_project 6 56627027 56633094 - MGP_WSBEiJ_P0076538 Vmn1r21 protein_coding protein_coding MGP_WSBEiJ_T0004997.1 MGP_WSBEiJ_G0004262.1 mouse_genomes_project 6 124719110 124726413 - Gm26826 antisense antisense MGP_WSBEiJ_T0001976.1 MGP_WSBEiJ_G0001896.1 mouse_genomes_project 6 73264968 73266907 + TEC TEC MGP_WSBEiJ_T0078752.1 MGP_WSBEiJ_G0030428.1 mouse_genomes_project 6 126810862 126812397 + Phb2 protein_coding retained_intron MGP_WSBEiJ_T0078753.1 MGP_WSBEiJ_G0030428.1 mouse_genomes_project 6 126810862 126811595 + Phb2 protein_coding retained_intron MGP_WSBEiJ_T0078754.1 MGP_WSBEiJ_G0030428.1 mouse_genomes_project 6 126810862 126815475 + Phb2 protein_coding retained_intron MGP_WSBEiJ_T0078755.1 MGP_WSBEiJ_G0030428.1 mouse_genomes_project 6 126810862 126815475 + MGP_WSBEiJ_P0078755 Phb2 protein_coding protein_coding MGP_WSBEiJ_T0078756.1 MGP_WSBEiJ_G0030428.1 mouse_genomes_project 6 126811292 126813327 + MGP_WSBEiJ_P0078756 Phb2 protein_coding protein_coding MGP_WSBEiJ_T0078757.1 MGP_WSBEiJ_G0030428.1 mouse_genomes_project 6 126811648 126815165 + MGP_WSBEiJ_P0078757 Phb2 protein_coding protein_coding MGP_WSBEiJ_T0078758.1 MGP_WSBEiJ_G0030428.1 mouse_genomes_project 6 126813872 126815475 + Phb2 protein_coding retained_intron MGP_WSBEiJ_T0078759.1 MGP_WSBEiJ_G0030428.1 mouse_genomes_project 6 126813887 126815064 + Phb2 protein_coding processed_transcript MGP_WSBEiJ_T0010628.1 MGP_WSBEiJ_G0008785.1 mouse_genomes_project 6 119972766 119972849 + Gm25953 miRNA miRNA MGP_WSBEiJ_T0002024.1 MGP_WSBEiJ_G0001944.1 mouse_genomes_project 6 88704350 88705398 - TEC TEC MGP_WSBEiJ_T0001940.1 MGP_WSBEiJ_G0001860.1 mouse_genomes_project 6 45829182 45830779 + TEC TEC MGP_WSBEiJ_T0099681.1 MGP_WSBEiJ_G0038344.1 mouse_genomes_project 6 125461748 125462161 - Gm25065 snoRNA snoRNA MGP_WSBEiJ_T0014909.1 MGP_WSBEiJ_G0013039.1 mouse_genomes_project 6 57780526 57780772 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076029.1 MGP_WSBEiJ_G0029848.1 mouse_genomes_project 6 41182661 41183715 + MGP_WSBEiJ_P0076029 Olfr13 protein_coding protein_coding MGP_WSBEiJ_T0015157.1 MGP_WSBEiJ_G0013287.1 mouse_genomes_project 6 135486718 135487169 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001891.1 MGP_WSBEiJ_G0001811.1 mouse_genomes_project 6 20436051 20438256 + TEC TEC MGP_WSBEiJ_T0002086.1 MGP_WSBEiJ_G0002006.1 mouse_genomes_project 6 118648156 118649632 + TEC TEC MGP_WSBEiJ_T0015080.1 MGP_WSBEiJ_G0013210.1 mouse_genomes_project 6 116123637 116124070 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008560.1 MGP_WSBEiJ_G0006923.1 mouse_genomes_project 6 107031353 107035868 - Gm15631 lincRNA lincRNA MGP_WSBEiJ_T0002101.1 MGP_WSBEiJ_G0002020.1 mouse_genomes_project 6 130053945 130056223 - TEC TEC MGP_WSBEiJ_T0077111.1 MGP_WSBEiJ_G0030106.1 mouse_genomes_project 6 84119664 84148832 + MGP_WSBEiJ_P0077111 Vax2 protein_coding protein_coding MGP_WSBEiJ_T0015101.1 MGP_WSBEiJ_G0013231.1 mouse_genomes_project 6 123289097 123289485 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075989.1 MGP_WSBEiJ_G0029825.1 mouse_genomes_project 6 40315223 40330788 - MGP_WSBEiJ_P0075989 Epha1 protein_coding protein_coding MGP_WSBEiJ_T0075990.1 MGP_WSBEiJ_G0029825.1 mouse_genomes_project 6 40315452 40330788 - MGP_WSBEiJ_P0075990 Epha1 protein_coding protein_coding MGP_WSBEiJ_T0075991.1 MGP_WSBEiJ_G0029825.1 mouse_genomes_project 6 40324559 40330755 - Epha1 protein_coding retained_intron MGP_WSBEiJ_T0100889.1 MGP_WSBEiJ_G0039347.1 mouse_genomes_project 6 39285636 39286805 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099686.1 MGP_WSBEiJ_G0038349.1 mouse_genomes_project 6 126112803 126112922 + Gm22916 snoRNA snoRNA MGP_WSBEiJ_T0014854.1 MGP_WSBEiJ_G0012984.1 mouse_genomes_project 6 39378554 39379001 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011440.1 MGP_WSBEiJ_G0009597.1 mouse_genomes_project 6 45998609 45998721 - Rny1 misc_RNA misc_RNA MGP_WSBEiJ_T0011423.1 MGP_WSBEiJ_G0009580.1 mouse_genomes_project 6 7694429 7694521 + Gm27894 misc_RNA misc_RNA MGP_WSBEiJ_T0004866.1 MGP_WSBEiJ_G0004176.1 mouse_genomes_project 6 41487441 41493588 + 9430018G01Rik antisense antisense MGP_WSBEiJ_T0097086.1 MGP_WSBEiJ_G0035767.1 mouse_genomes_project 6 113004347 113004458 + Gm22093 rRNA rRNA MGP_WSBEiJ_T0008445.1 MGP_WSBEiJ_G0006833.1 mouse_genomes_project 6 45735089 45740131 + Gm26625 lincRNA lincRNA MGP_WSBEiJ_T0004847.1 MGP_WSBEiJ_G0004160.1 mouse_genomes_project 6 31677036 31699294 + Gm13856 antisense antisense MGP_WSBEiJ_T0005050.1 MGP_WSBEiJ_G0004308.1 mouse_genomes_project 6 151262691 151299735 - Gm6288 antisense antisense MGP_WSBEiJ_T0005051.1 MGP_WSBEiJ_G0004308.1 mouse_genomes_project 6 151299053 151299966 - Gm6288 antisense antisense MGP_WSBEiJ_T0079769.1 MGP_WSBEiJ_G0030662.1 mouse_genomes_project 6 150838419 150846266 + Mrps35 protein_coding retained_intron MGP_WSBEiJ_T0079770.1 MGP_WSBEiJ_G0030662.1 mouse_genomes_project 6 150838419 150871588 + MGP_WSBEiJ_P0079770 Mrps35 protein_coding protein_coding MGP_WSBEiJ_T0079771.1 MGP_WSBEiJ_G0030662.1 mouse_genomes_project 6 150840246 150852016 + MGP_WSBEiJ_P0079771 Mrps35 protein_coding protein_coding MGP_WSBEiJ_T0079772.1 MGP_WSBEiJ_G0030662.1 mouse_genomes_project 6 150856378 150867524 + Mrps35 protein_coding processed_transcript MGP_WSBEiJ_T0079773.1 MGP_WSBEiJ_G0030662.1 mouse_genomes_project 6 150857394 150867603 + Mrps35 protein_coding processed_transcript MGP_WSBEiJ_T0077734.1 MGP_WSBEiJ_G0030232.1 mouse_genomes_project 6 93730474 93757368 + MGP_WSBEiJ_P0077734 A730049H05Rik protein_coding protein_coding MGP_WSBEiJ_T0077735.1 MGP_WSBEiJ_G0030232.1 mouse_genomes_project 6 93741626 93762042 + A730049H05Rik protein_coding processed_transcript MGP_WSBEiJ_T0075950.1 MGP_WSBEiJ_G0029818.1 mouse_genomes_project 6 40171716 40172676 + MGP_WSBEiJ_P0075950 Tas2r144 protein_coding protein_coding MGP_WSBEiJ_T0076322.1 MGP_WSBEiJ_G0029919.1 mouse_genomes_project 6 50693422 50695833 - MGP_WSBEiJ_P0076322 Hoxa6 protein_coding protein_coding MGP_WSBEiJ_T0008542.1 MGP_WSBEiJ_G0006910.1 mouse_genomes_project 6 95952002 95960379 + 4930511E03Rik lincRNA lincRNA MGP_WSBEiJ_T0075890.1 MGP_WSBEiJ_G0029786.1 mouse_genomes_project 6 38395502 38396444 - MGP_WSBEiJ_P0075890 Olfr461 protein_coding protein_coding MGP_WSBEiJ_T0004859.1 MGP_WSBEiJ_G0004170.1 mouse_genomes_project 6 37684677 37685117 - Gm26833 antisense antisense MGP_WSBEiJ_T0011426.1 MGP_WSBEiJ_G0009583.1 mouse_genomes_project 6 14668698 14668882 + Gm27960 misc_RNA misc_RNA MGP_WSBEiJ_T0002090.1 MGP_WSBEiJ_G0002009.1 mouse_genomes_project 6 122247891 122248363 - TEC TEC MGP_WSBEiJ_T0002033.1 MGP_WSBEiJ_G0001953.1 mouse_genomes_project 6 90102542 90103965 + TEC TEC MGP_WSBEiJ_T0000173.1 MGP_WSBEiJ_G0000130.1 mouse_genomes_project 6 68401248 68401803 - MGP_WSBEiJ_P0000173 Igkv4-92 IG_V_gene IG_V_gene MGP_WSBEiJ_T0015160.1 MGP_WSBEiJ_G0013290.1 mouse_genomes_project 6 135972166 135972539 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075572.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28836224 28955195 + MGP_WSBEiJ_P0075572 Mkln1 protein_coding protein_coding MGP_WSBEiJ_T0075573.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28836317 28908631 + Mkln1 protein_coding retained_intron MGP_WSBEiJ_T0075574.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28836318 28873281 + Mkln1 protein_coding retained_intron MGP_WSBEiJ_T0075575.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28836325 28856721 + Mkln1 protein_coding retained_intron MGP_WSBEiJ_T0075576.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28836334 28841758 + Mkln1 protein_coding retained_intron MGP_WSBEiJ_T0075577.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28836334 28868143 + Mkln1 protein_coding retained_intron MGP_WSBEiJ_T0075578.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28836348 28870395 + Mkln1 protein_coding processed_transcript MGP_WSBEiJ_T0075579.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28867957 28928037 + Mkln1 protein_coding processed_transcript MGP_WSBEiJ_T0075580.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28867991 28912122 + Mkln1 protein_coding processed_transcript MGP_WSBEiJ_T0075581.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28905861 28931319 + Mkln1 protein_coding retained_intron MGP_WSBEiJ_T0075582.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28914612 28918224 + Mkln1 protein_coding retained_intron MGP_WSBEiJ_T0075583.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28928019 28946353 + MGP_WSBEiJ_P0075583 Mkln1 protein_coding protein_coding MGP_WSBEiJ_T0075584.1 MGP_WSBEiJ_G0029722.1 mouse_genomes_project 6 28931246 28946232 + Mkln1 protein_coding retained_intron MGP_WSBEiJ_T0097085.1 MGP_WSBEiJ_G0035766.1 mouse_genomes_project 6 95827652 95827795 - Gm24601 rRNA rRNA MGP_WSBEiJ_T0077108.1 MGP_WSBEiJ_G0030104.1 mouse_genomes_project 6 84050302 84062386 - MGP_WSBEiJ_P0077108 Clec4f protein_coding protein_coding MGP_WSBEiJ_T0077109.1 MGP_WSBEiJ_G0030104.1 mouse_genomes_project 6 84050977 84062320 - Clec4f protein_coding processed_transcript MGP_WSBEiJ_T0099655.1 MGP_WSBEiJ_G0038318.1 mouse_genomes_project 6 58630196 58630325 + Gm22622 snoRNA snoRNA MGP_WSBEiJ_T0076541.1 MGP_WSBEiJ_G0029981.1 mouse_genomes_project 6 56688117 56689026 - MGP_WSBEiJ_P0076541 protein_coding protein_coding MGP_WSBEiJ_T0076506.1 MGP_WSBEiJ_G0029961.1 mouse_genomes_project 6 55790556 55791546 + MGP_WSBEiJ_P0076506 protein_coding protein_coding MGP_WSBEiJ_T0010629.1 MGP_WSBEiJ_G0008786.1 mouse_genomes_project 6 121664220 121664305 - Mir706 miRNA miRNA MGP_WSBEiJ_T0010594.1 MGP_WSBEiJ_G0008751.1 mouse_genomes_project 6 46661745 46661819 + Gm24325 miRNA miRNA MGP_WSBEiJ_T0008504.1 MGP_WSBEiJ_G0006883.1 mouse_genomes_project 6 82323529 82332299 + lincRNA lincRNA MGP_WSBEiJ_T0008506.1 MGP_WSBEiJ_G0006883.1 mouse_genomes_project 6 82331335 82332877 + lincRNA lincRNA MGP_WSBEiJ_T0014978.1 MGP_WSBEiJ_G0013108.1 mouse_genomes_project 6 73556187 73556606 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078737.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126756478 126802873 + Lpcat3 protein_coding retained_intron MGP_WSBEiJ_T0078738.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126756478 126802921 + MGP_WSBEiJ_P0078738 Lpcat3 protein_coding protein_coding MGP_WSBEiJ_T0078739.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126756623 126800793 + MGP_WSBEiJ_P0078739 Lpcat3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078740.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126756632 126798007 + Lpcat3 protein_coding retained_intron MGP_WSBEiJ_T0078741.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126756666 126799066 + Lpcat3 protein_coding retained_intron MGP_WSBEiJ_T0078742.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126799924 126801116 + Lpcat3 protein_coding retained_intron MGP_WSBEiJ_T0078743.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126800759 126801561 + Lpcat3 protein_coding processed_transcript MGP_WSBEiJ_T0078744.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126801257 126802431 + Lpcat3 protein_coding retained_intron MGP_WSBEiJ_T0078745.1 MGP_WSBEiJ_G0030426.1 mouse_genomes_project 6 126801507 126802520 + Lpcat3 protein_coding retained_intron MGP_WSBEiJ_T0015029.1 MGP_WSBEiJ_G0013159.1 mouse_genomes_project 6 95850429 95850865 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001910.1 MGP_WSBEiJ_G0001830.1 mouse_genomes_project 6 33770638 33773029 - TEC TEC MGP_WSBEiJ_T0075826.1 MGP_WSBEiJ_G0029770.1 mouse_genomes_project 6 37153896 37164037 + MGP_WSBEiJ_P0075826 Rab19 protein_coding protein_coding MGP_WSBEiJ_T0008622.1 MGP_WSBEiJ_G0006972.1 mouse_genomes_project 6 146644410 146646383 + A930014E10Rik lincRNA lincRNA MGP_WSBEiJ_T0100942.1 MGP_WSBEiJ_G0039399.1 mouse_genomes_project 6 135027811 135177964 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0075327.1 MGP_WSBEiJ_G0029682.1 mouse_genomes_project 6 25720429 25723420 + MGP_WSBEiJ_P0075327 Arf5 protein_coding protein_coding MGP_WSBEiJ_T0075328.1 MGP_WSBEiJ_G0029682.1 mouse_genomes_project 6 25720453 25723158 + MGP_WSBEiJ_P0075328 Arf5 protein_coding protein_coding MGP_WSBEiJ_T0075329.1 MGP_WSBEiJ_G0029682.1 mouse_genomes_project 6 25720572 25721535 + Arf5 protein_coding retained_intron MGP_WSBEiJ_T0079738.1 MGP_WSBEiJ_G0030655.1 mouse_genomes_project 6 150447872 150451837 - MGP_WSBEiJ_P0079738 protein_coding protein_coding MGP_WSBEiJ_T0014996.1 MGP_WSBEiJ_G0013126.1 mouse_genomes_project 6 83362729 83363486 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077580.1 MGP_WSBEiJ_G0030195.1 mouse_genomes_project 6 90636579 90647493 + MGP_WSBEiJ_P0077580 Vmn1r44 protein_coding protein_coding MGP_WSBEiJ_T0077581.1 MGP_WSBEiJ_G0030195.1 mouse_genomes_project 6 90647185 90648293 + MGP_WSBEiJ_P0077581 Vmn1r44 protein_coding protein_coding MGP_WSBEiJ_T0001995.1 MGP_WSBEiJ_G0001915.1 mouse_genomes_project 6 81126493 81129173 + TEC TEC MGP_WSBEiJ_T0078238.1 MGP_WSBEiJ_G0030325.1 mouse_genomes_project 6 117215221 117250198 + MGP_WSBEiJ_P0078238 Cand2 protein_coding protein_coding MGP_WSBEiJ_T0008498.1 MGP_WSBEiJ_G0006877.1 mouse_genomes_project 6 73482065 73502992 - lincRNA lincRNA MGP_WSBEiJ_T0078125.1 MGP_WSBEiJ_G0030306.1 mouse_genomes_project 6 115176334 115190352 + MGP_WSBEiJ_P0078125 Tatdn2 protein_coding protein_coding MGP_WSBEiJ_T0078126.1 MGP_WSBEiJ_G0030306.1 mouse_genomes_project 6 115176843 115190232 + MGP_WSBEiJ_P0078126 Tatdn2 protein_coding protein_coding MGP_WSBEiJ_T0078127.1 MGP_WSBEiJ_G0030306.1 mouse_genomes_project 6 115176952 115189487 + MGP_WSBEiJ_P0078127 Tatdn2 protein_coding protein_coding MGP_WSBEiJ_T0078128.1 MGP_WSBEiJ_G0030306.1 mouse_genomes_project 6 115184105 115190349 + MGP_WSBEiJ_P0078128 Tatdn2 protein_coding protein_coding MGP_WSBEiJ_T0078129.1 MGP_WSBEiJ_G0030306.1 mouse_genomes_project 6 115186557 115189732 + MGP_WSBEiJ_P0078129 Tatdn2 protein_coding protein_coding MGP_WSBEiJ_T0001916.1 MGP_WSBEiJ_G0001836.1 mouse_genomes_project 6 39590650 39594198 - TEC TEC MGP_WSBEiJ_T0079029.1 MGP_WSBEiJ_G0030480.1 mouse_genomes_project 6 129323351 129344107 - MGP_WSBEiJ_P0079029 Tigar protein_coding protein_coding MGP_WSBEiJ_T0079030.1 MGP_WSBEiJ_G0030480.1 mouse_genomes_project 6 129326385 129344114 - MGP_WSBEiJ_P0079030 Tigar protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002085.1 MGP_WSBEiJ_G0002005.1 mouse_genomes_project 6 118136566 118139294 + TEC TEC MGP_WSBEiJ_T0001956.1 MGP_WSBEiJ_G0001876.1 mouse_genomes_project 6 57972082 57974177 + TEC TEC MGP_WSBEiJ_T0100312.1 MGP_WSBEiJ_G0038811.1 mouse_genomes_project 6 136509998 136512301 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100313.1 MGP_WSBEiJ_G0038811.1 mouse_genomes_project 6 136510031 136512302 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0014936.1 MGP_WSBEiJ_G0013066.1 mouse_genomes_project 6 64710710 64712499 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015005.1 MGP_WSBEiJ_G0013135.1 mouse_genomes_project 6 85594943 85595520 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098427.1 MGP_WSBEiJ_G0037090.1 mouse_genomes_project 6 81969024 81969183 + Gm26264 snRNA snRNA MGP_WSBEiJ_T0077231.1 MGP_WSBEiJ_G0030125.1 mouse_genomes_project 6 86003001 86039167 - MGP_WSBEiJ_P0077231 Fbxo41 protein_coding protein_coding MGP_WSBEiJ_T0077232.1 MGP_WSBEiJ_G0030125.1 mouse_genomes_project 6 86003005 86039059 - MGP_WSBEiJ_P0077232 Fbxo41 protein_coding protein_coding MGP_WSBEiJ_T0077233.1 MGP_WSBEiJ_G0030125.1 mouse_genomes_project 6 86003007 86039031 - MGP_WSBEiJ_P0077233 Fbxo41 protein_coding protein_coding MGP_WSBEiJ_T0011446.1 MGP_WSBEiJ_G0009603.1 mouse_genomes_project 6 50733480 50733667 + Gm27492 misc_RNA misc_RNA MGP_WSBEiJ_T0008505.1 MGP_WSBEiJ_G0006884.1 mouse_genomes_project 6 82324904 82325895 - Gm44202 lincRNA lincRNA MGP_WSBEiJ_T0076199.1 MGP_WSBEiJ_G0029889.1 mouse_genomes_project 6 47103029 47104441 + MGP_WSBEiJ_P0076199 Tmem176a protein_coding protein_coding MGP_WSBEiJ_T0076200.1 MGP_WSBEiJ_G0029889.1 mouse_genomes_project 6 47103622 47107980 + MGP_WSBEiJ_P0076200 Tmem176a protein_coding protein_coding MGP_WSBEiJ_T0076201.1 MGP_WSBEiJ_G0029889.1 mouse_genomes_project 6 47103632 47110278 + MGP_WSBEiJ_P0076201 Tmem176a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076202.1 MGP_WSBEiJ_G0029889.1 mouse_genomes_project 6 47103658 47107472 + Tmem176a protein_coding retained_intron MGP_WSBEiJ_T0076203.1 MGP_WSBEiJ_G0029889.1 mouse_genomes_project 6 47103693 47107476 + MGP_WSBEiJ_P0076203 Tmem176a protein_coding protein_coding MGP_WSBEiJ_T0076204.1 MGP_WSBEiJ_G0029889.1 mouse_genomes_project 6 47103880 47106886 + MGP_WSBEiJ_P0076204 Tmem176a protein_coding protein_coding MGP_WSBEiJ_T0076205.1 MGP_WSBEiJ_G0029889.1 mouse_genomes_project 6 47104699 47105703 + MGP_WSBEiJ_P0076205 Tmem176a protein_coding protein_coding MGP_WSBEiJ_T0014882.1 MGP_WSBEiJ_G0013012.1 mouse_genomes_project 6 47354553 47355154 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075784.1 MGP_WSBEiJ_G0029761.1 mouse_genomes_project 6 36242054 36248001 + Fmc1 protein_coding processed_transcript MGP_WSBEiJ_T0075785.1 MGP_WSBEiJ_G0029761.1 mouse_genomes_project 6 36243375 36248002 + MGP_WSBEiJ_P0075785 Fmc1 protein_coding protein_coding MGP_WSBEiJ_T0004853.1 MGP_WSBEiJ_G0004165.1 mouse_genomes_project 6 36648174 36718084 - Gm42962 antisense antisense MGP_WSBEiJ_T0100885.1 MGP_WSBEiJ_G0039343.1 mouse_genomes_project 6 36250856 36254825 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014786.1 MGP_WSBEiJ_G0012916.1 mouse_genomes_project 6 3981805 3983986 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001927.1 MGP_WSBEiJ_G0001847.1 mouse_genomes_project 6 43366977 43367532 + TEC TEC MGP_WSBEiJ_T0077768.1 MGP_WSBEiJ_G0030239.1 mouse_genomes_project 6 96492021 96742999 - MGP_WSBEiJ_P0077768 Suclg2 protein_coding protein_coding MGP_WSBEiJ_T0077769.1 MGP_WSBEiJ_G0030239.1 mouse_genomes_project 6 96493156 96716672 - MGP_WSBEiJ_P0077769 Suclg2 protein_coding protein_coding MGP_WSBEiJ_T0077770.1 MGP_WSBEiJ_G0030239.1 mouse_genomes_project 6 96591890 96673184 - Suclg2 protein_coding processed_transcript MGP_WSBEiJ_T0077771.1 MGP_WSBEiJ_G0030239.1 mouse_genomes_project 6 96683909 96742999 - Suclg2 protein_coding retained_intron MGP_WSBEiJ_T0014793.1 MGP_WSBEiJ_G0012923.1 mouse_genomes_project 6 5968168 5968481 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015187.1 MGP_WSBEiJ_G0013317.1 mouse_genomes_project 6 146818457 146818660 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098438.1 MGP_WSBEiJ_G0037101.1 mouse_genomes_project 6 108422857 108422964 + Gm22418 snRNA snRNA MGP_WSBEiJ_T0015069.1 MGP_WSBEiJ_G0013199.1 mouse_genomes_project 6 113818482 113818950 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008538.1 MGP_WSBEiJ_G0006906.1 mouse_genomes_project 6 91944764 91945876 - Gm44278 lincRNA lincRNA MGP_WSBEiJ_T0014998.1 MGP_WSBEiJ_G0013128.1 mouse_genomes_project 6 84263804 84264570 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076540.1 MGP_WSBEiJ_G0029980.1 mouse_genomes_project 6 56688077 56689073 - MGP_WSBEiJ_P0076540 Vmn1r23 protein_coding protein_coding MGP_WSBEiJ_T0097087.1 MGP_WSBEiJ_G0035768.1 mouse_genomes_project 6 113657697 113657797 - n-R5s165 rRNA rRNA MGP_WSBEiJ_T0078344.1 MGP_WSBEiJ_G0030345.1 mouse_genomes_project 6 118156911 118159130 + MGP_WSBEiJ_P0078344 8430408G22Rik protein_coding protein_coding MGP_WSBEiJ_T0078345.1 MGP_WSBEiJ_G0030345.1 mouse_genomes_project 6 118156930 118159130 + MGP_WSBEiJ_P0078345 8430408G22Rik protein_coding protein_coding MGP_WSBEiJ_T0078346.1 MGP_WSBEiJ_G0030345.1 mouse_genomes_project 6 118156998 118158213 + MGP_WSBEiJ_P0078346 8430408G22Rik protein_coding protein_coding MGP_WSBEiJ_T0015141.1 MGP_WSBEiJ_G0013271.1 mouse_genomes_project 6 132273184 132273753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014993.1 MGP_WSBEiJ_G0013123.1 mouse_genomes_project 6 82572679 82573351 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011449.1 MGP_WSBEiJ_G0009606.1 mouse_genomes_project 6 50735413 50735617 + Gm27454 misc_RNA misc_RNA MGP_WSBEiJ_T0077863.1 MGP_WSBEiJ_G0030257.1 mouse_genomes_project 6 101820372 101927098 - MGP_WSBEiJ_P0077863 Shq1 protein_coding protein_coding MGP_WSBEiJ_T0077864.1 MGP_WSBEiJ_G0030257.1 mouse_genomes_project 6 101824551 101927098 - MGP_WSBEiJ_P0077864 Shq1 protein_coding protein_coding MGP_WSBEiJ_T0077865.1 MGP_WSBEiJ_G0030257.1 mouse_genomes_project 6 101824552 101927080 - MGP_WSBEiJ_P0077865 Shq1 protein_coding protein_coding MGP_WSBEiJ_T0077866.1 MGP_WSBEiJ_G0030257.1 mouse_genomes_project 6 101918800 101927074 - Shq1 protein_coding processed_transcript MGP_WSBEiJ_T0017657.1 MGP_WSBEiJ_G0015048.1 mouse_genomes_project 6 46997546 46999815 - Gimap1os processed_transcript antisense MGP_WSBEiJ_T0017658.1 MGP_WSBEiJ_G0015048.1 mouse_genomes_project 6 46998694 47000639 - Gimap1os processed_transcript retained_intron MGP_WSBEiJ_T0079492.1 MGP_WSBEiJ_G0030611.1 mouse_genomes_project 6 143551434 143580963 - MGP_WSBEiJ_P0079492 Plcz1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0079493.1 MGP_WSBEiJ_G0030611.1 mouse_genomes_project 6 143552895 143610279 - MGP_WSBEiJ_P0079493 Plcz1 protein_coding protein_coding MGP_WSBEiJ_T0079494.1 MGP_WSBEiJ_G0030611.1 mouse_genomes_project 6 143552944 143610253 - MGP_WSBEiJ_P0079494 Plcz1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079495.1 MGP_WSBEiJ_G0030611.1 mouse_genomes_project 6 143552946 143610234 - MGP_WSBEiJ_P0079495 Plcz1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079496.1 MGP_WSBEiJ_G0030611.1 mouse_genomes_project 6 143587264 143610234 - MGP_WSBEiJ_P0079496 Plcz1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079776.1 MGP_WSBEiJ_G0030664.1 mouse_genomes_project 6 150887480 150911169 + MGP_WSBEiJ_P0079776 Klhl42 protein_coding protein_coding MGP_WSBEiJ_T0079777.1 MGP_WSBEiJ_G0030664.1 mouse_genomes_project 6 150902466 150906560 + Klhl42 protein_coding processed_transcript MGP_WSBEiJ_T0079778.1 MGP_WSBEiJ_G0030664.1 mouse_genomes_project 6 150906480 150908988 + MGP_WSBEiJ_P0079778 Klhl42 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008387.1 MGP_WSBEiJ_G0006797.1 mouse_genomes_project 6 16251735 16284704 - 4930524B17Rik lincRNA lincRNA MGP_WSBEiJ_T0014959.1 MGP_WSBEiJ_G0013089.1 mouse_genomes_project 6 67190170 67191247 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100925.1 MGP_WSBEiJ_G0039383.1 mouse_genomes_project 6 90760031 90983783 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001920.1 MGP_WSBEiJ_G0001840.1 mouse_genomes_project 6 43162392 43164605 + TEC TEC MGP_WSBEiJ_T0077596.1 MGP_WSBEiJ_G0030205.1 mouse_genomes_project 6 91120323 91135244 - MGP_WSBEiJ_P0077596 Chst13 protein_coding protein_coding MGP_WSBEiJ_T0014781.1 MGP_WSBEiJ_G0012911.1 mouse_genomes_project 6 3131966 3132199 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002070.1 MGP_WSBEiJ_G0001990.1 mouse_genomes_project 6 104962588 104964082 + TEC TEC MGP_WSBEiJ_T0078288.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117670560 117726417 + MGP_WSBEiJ_P0078288 Fam21 protein_coding protein_coding MGP_WSBEiJ_T0078289.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117670568 117718154 + MGP_WSBEiJ_P0078289 Fam21 protein_coding protein_coding MGP_WSBEiJ_T0078290.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117670578 117683068 + MGP_WSBEiJ_P0078290 Fam21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078291.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117670617 117671845 + Fam21 protein_coding retained_intron MGP_WSBEiJ_T0078292.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117670644 117676489 + MGP_WSBEiJ_P0078292 Fam21 protein_coding protein_coding MGP_WSBEiJ_T0078293.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117670659 117678669 + MGP_WSBEiJ_P0078293 Fam21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078294.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117670728 117726396 + Fam21 protein_coding retained_intron MGP_WSBEiJ_T0078295.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117671038 117722064 + MGP_WSBEiJ_P0078295 Fam21 protein_coding protein_coding MGP_WSBEiJ_T0078296.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117683072 117687448 + Fam21 protein_coding retained_intron MGP_WSBEiJ_T0078297.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117684406 117689749 + MGP_WSBEiJ_P0078297 Fam21 protein_coding protein_coding MGP_WSBEiJ_T0078298.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117688460 117692132 + Fam21 protein_coding retained_intron MGP_WSBEiJ_T0078299.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117718887 117719910 + Fam21 protein_coding retained_intron MGP_WSBEiJ_T0078300.1 MGP_WSBEiJ_G0030334.1 mouse_genomes_project 6 117719637 117722049 + Fam21 protein_coding retained_intron MGP_WSBEiJ_T0079255.1 MGP_WSBEiJ_G0030557.1 mouse_genomes_project 6 136043026 136043956 + MGP_WSBEiJ_P0079255 Tas2r113 protein_coding protein_coding MGP_WSBEiJ_T0001983.1 MGP_WSBEiJ_G0001903.1 mouse_genomes_project 6 77739951 77743184 - TEC TEC MGP_WSBEiJ_T0078990.1 MGP_WSBEiJ_G0030469.1 mouse_genomes_project 6 128304851 128372603 - MGP_WSBEiJ_P0078990 Ntf3 protein_coding protein_coding MGP_WSBEiJ_T0078991.1 MGP_WSBEiJ_G0030469.1 mouse_genomes_project 6 128304851 128370833 - MGP_WSBEiJ_P0078991 Ntf3 protein_coding protein_coding MGP_WSBEiJ_T0078992.1 MGP_WSBEiJ_G0030469.1 mouse_genomes_project 6 128304851 128372798 - MGP_WSBEiJ_P0078992 Ntf3 protein_coding protein_coding MGP_WSBEiJ_T0014856.1 MGP_WSBEiJ_G0012986.1 mouse_genomes_project 6 40202775 40207146 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014963.1 MGP_WSBEiJ_G0013093.1 mouse_genomes_project 6 67869246 67869537 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010596.1 MGP_WSBEiJ_G0008753.1 mouse_genomes_project 6 49666675 49666774 - Mir148a miRNA miRNA MGP_WSBEiJ_T0076027.1 MGP_WSBEiJ_G0029847.1 mouse_genomes_project 6 41171645 41176737 + MGP_WSBEiJ_P0076027 Olfr437 protein_coding protein_coding MGP_WSBEiJ_T0076028.1 MGP_WSBEiJ_G0029847.1 mouse_genomes_project 6 41175719 41176737 + MGP_WSBEiJ_P0076028 Olfr437 protein_coding protein_coding MGP_WSBEiJ_T0079750.1 MGP_WSBEiJ_G0030658.1 mouse_genomes_project 6 150638495 150661573 + MGP_WSBEiJ_P0079750 Smco2 protein_coding protein_coding MGP_WSBEiJ_T0079751.1 MGP_WSBEiJ_G0030658.1 mouse_genomes_project 6 150638548 150645472 + Smco2 protein_coding retained_intron MGP_WSBEiJ_T0079752.1 MGP_WSBEiJ_G0030658.1 mouse_genomes_project 6 150646157 150653570 + Smco2 protein_coding processed_transcript MGP_WSBEiJ_T0079753.1 MGP_WSBEiJ_G0030658.1 mouse_genomes_project 6 150651085 150658341 + Smco2 protein_coding processed_transcript MGP_WSBEiJ_T0015016.1 MGP_WSBEiJ_G0013146.1 mouse_genomes_project 6 91042076 91042658 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075012.1 MGP_WSBEiJ_G0029618.1 mouse_genomes_project 6 4470621 4488425 - MGP_WSBEiJ_P0075012 Asns protein_coding protein_coding MGP_WSBEiJ_T0075013.1 MGP_WSBEiJ_G0029618.1 mouse_genomes_project 6 4470621 4488042 - MGP_WSBEiJ_P0075013 Asns protein_coding protein_coding MGP_WSBEiJ_T0075014.1 MGP_WSBEiJ_G0029618.1 mouse_genomes_project 6 4470922 4472848 - Asns protein_coding processed_transcript MGP_WSBEiJ_T0075015.1 MGP_WSBEiJ_G0029618.1 mouse_genomes_project 6 4476740 4477810 - Asns protein_coding retained_intron MGP_WSBEiJ_T0075016.1 MGP_WSBEiJ_G0029618.1 mouse_genomes_project 6 4477724 4488281 - MGP_WSBEiJ_P0075016 Asns protein_coding protein_coding MGP_WSBEiJ_T0075017.1 MGP_WSBEiJ_G0029618.1 mouse_genomes_project 6 4480429 4487395 - MGP_WSBEiJ_P0075017 Asns protein_coding protein_coding MGP_WSBEiJ_T0075018.1 MGP_WSBEiJ_G0029618.1 mouse_genomes_project 6 4480521 4488043 - MGP_WSBEiJ_P0075018 Asns protein_coding protein_coding MGP_WSBEiJ_T0079207.1 MGP_WSBEiJ_G0030527.1 mouse_genomes_project 6 132320457 132334239 - MGP_WSBEiJ_P0079207 Klri2 protein_coding protein_coding MGP_WSBEiJ_T0000291.1 MGP_WSBEiJ_G0000239.1 mouse_genomes_project 6 69031820 69032129 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0010589.1 MGP_WSBEiJ_G0008746.1 mouse_genomes_project 6 34011937 34012021 + Mir490 miRNA miRNA MGP_WSBEiJ_T0001867.1 MGP_WSBEiJ_G0001787.1 mouse_genomes_project 6 1214354 1216146 + TEC TEC MGP_WSBEiJ_T0001953.1 MGP_WSBEiJ_G0001873.1 mouse_genomes_project 6 55637290 55640276 - TEC TEC MGP_WSBEiJ_T0004819.1 MGP_WSBEiJ_G0004140.1 mouse_genomes_project 6 2752925 2769102 - 1700019G24Rik antisense antisense MGP_WSBEiJ_T0100286.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46162673 46175240 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100287.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46162697 46168841 + transcribed_unprocessed_pseudogene retained_intron MGP_WSBEiJ_T0100288.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46162705 46168857 + transcribed_unprocessed_pseudogene retained_intron MGP_WSBEiJ_T0100289.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46162710 46167423 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100290.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46162710 46173844 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100291.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46162752 46174265 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100292.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46166129 46169680 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100293.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46166197 46172029 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100294.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46166588 46176609 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100295.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46166601 46174266 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100296.1 MGP_WSBEiJ_G0029863.1 mouse_genomes_project 6 46167369 46174265 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0008596.1 MGP_WSBEiJ_G0006957.1 mouse_genomes_project 6 131295894 131305540 - lincRNA lincRNA MGP_WSBEiJ_T0076795.1 MGP_WSBEiJ_G0030041.1 mouse_genomes_project 6 72277138 72305047 - MGP_WSBEiJ_P0076795 Usp39 protein_coding protein_coding MGP_WSBEiJ_T0076796.1 MGP_WSBEiJ_G0030041.1 mouse_genomes_project 6 72279760 72293404 - Usp39 protein_coding retained_intron MGP_WSBEiJ_T0076797.1 MGP_WSBEiJ_G0030041.1 mouse_genomes_project 6 72296295 72302987 - MGP_WSBEiJ_P0076797 Usp39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076830.1 MGP_WSBEiJ_G0030048.1 mouse_genomes_project 6 72397981 72414841 - MGP_WSBEiJ_P0076830 Mat2a protein_coding protein_coding MGP_WSBEiJ_T0076831.1 MGP_WSBEiJ_G0030048.1 mouse_genomes_project 6 72397981 72414843 - MGP_WSBEiJ_P0076831 Mat2a protein_coding protein_coding MGP_WSBEiJ_T0076832.1 MGP_WSBEiJ_G0030048.1 mouse_genomes_project 6 72409844 72414841 - MGP_WSBEiJ_P0076832 Mat2a protein_coding protein_coding MGP_WSBEiJ_T0076833.1 MGP_WSBEiJ_G0030048.1 mouse_genomes_project 6 72411100 72414673 - MGP_WSBEiJ_P0076833 Mat2a protein_coding protein_coding MGP_WSBEiJ_T0076834.1 MGP_WSBEiJ_G0030048.1 mouse_genomes_project 6 72411706 72414825 - Mat2a protein_coding retained_intron MGP_WSBEiJ_T0076835.1 MGP_WSBEiJ_G0030048.1 mouse_genomes_project 6 72412037 72414828 - Mat2a protein_coding retained_intron MGP_WSBEiJ_T0076836.1 MGP_WSBEiJ_G0030048.1 mouse_genomes_project 6 72412679 72414833 - Mat2a protein_coding processed_transcript MGP_WSBEiJ_T0076837.1 MGP_WSBEiJ_G0030048.1 mouse_genomes_project 6 72414086 72414841 - Mat2a protein_coding retained_intron MGP_WSBEiJ_T0011457.1 MGP_WSBEiJ_G0009614.1 mouse_genomes_project 6 84111311 84111777 + Gm27631 misc_RNA misc_RNA MGP_WSBEiJ_T0097448.1 MGP_WSBEiJ_G0036118.1 mouse_genomes_project 6 115279252 115281131 - Gm44167 sense_intronic sense_intronic MGP_WSBEiJ_T0078958.1 MGP_WSBEiJ_G0030463.1 mouse_genomes_project 6 127471232 127480992 + MGP_WSBEiJ_P0078958 Scnn1a protein_coding protein_coding MGP_WSBEiJ_T0078959.1 MGP_WSBEiJ_G0030463.1 mouse_genomes_project 6 127471306 127495624 + MGP_WSBEiJ_P0078959 Scnn1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078960.1 MGP_WSBEiJ_G0030463.1 mouse_genomes_project 6 127471548 127495847 + MGP_WSBEiJ_P0078960 Scnn1a protein_coding protein_coding MGP_WSBEiJ_T0078961.1 MGP_WSBEiJ_G0030463.1 mouse_genomes_project 6 127471908 127496184 + MGP_WSBEiJ_P0078961 Scnn1a protein_coding protein_coding MGP_WSBEiJ_T0014984.1 MGP_WSBEiJ_G0013114.1 mouse_genomes_project 6 76248328 76249601 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077818.1 MGP_WSBEiJ_G0030250.1 mouse_genomes_project 6 99350849 99463525 - MGP_WSBEiJ_P0077818 Gm765 protein_coding protein_coding MGP_WSBEiJ_T0077819.1 MGP_WSBEiJ_G0030250.1 mouse_genomes_project 6 99462232 99463430 - Gm765 protein_coding retained_intron MGP_WSBEiJ_T0077604.1 MGP_WSBEiJ_G0030208.1 mouse_genomes_project 6 91216399 91243012 - MGP_WSBEiJ_P0077604 Cfap100 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077605.1 MGP_WSBEiJ_G0030208.1 mouse_genomes_project 6 91216656 91242657 - MGP_WSBEiJ_P0077605 Cfap100 protein_coding protein_coding MGP_WSBEiJ_T0077606.1 MGP_WSBEiJ_G0030208.1 mouse_genomes_project 6 91216658 91242638 - MGP_WSBEiJ_P0077606 Cfap100 protein_coding protein_coding MGP_WSBEiJ_T0077607.1 MGP_WSBEiJ_G0030208.1 mouse_genomes_project 6 91233700 91243022 - MGP_WSBEiJ_P0077607 Cfap100 protein_coding protein_coding MGP_WSBEiJ_T0077608.1 MGP_WSBEiJ_G0030208.1 mouse_genomes_project 6 91233913 91242660 - MGP_WSBEiJ_P0077608 Cfap100 protein_coding protein_coding MGP_WSBEiJ_T0077609.1 MGP_WSBEiJ_G0030208.1 mouse_genomes_project 6 91240708 91242620 - MGP_WSBEiJ_P0077609 Cfap100 protein_coding protein_coding MGP_WSBEiJ_T0077610.1 MGP_WSBEiJ_G0030208.1 mouse_genomes_project 6 91242120 91242810 - Cfap100 protein_coding processed_transcript MGP_WSBEiJ_T0014835.1 MGP_WSBEiJ_G0012965.1 mouse_genomes_project 6 28151910 28152126 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075857.1 MGP_WSBEiJ_G0029777.1 mouse_genomes_project 6 37611114 37624135 - MGP_WSBEiJ_P0075857 Mrps33 protein_coding protein_coding MGP_WSBEiJ_T0075858.1 MGP_WSBEiJ_G0029777.1 mouse_genomes_project 6 37613979 37624032 - MGP_WSBEiJ_P0075858 Mrps33 protein_coding protein_coding MGP_WSBEiJ_T0075859.1 MGP_WSBEiJ_G0029777.1 mouse_genomes_project 6 37614171 37619238 - MGP_WSBEiJ_P0075859 Mrps33 protein_coding protein_coding MGP_WSBEiJ_T0075860.1 MGP_WSBEiJ_G0029777.1 mouse_genomes_project 6 37618437 37624040 - Mrps33 protein_coding retained_intron MGP_WSBEiJ_T0078187.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116385720 116420347 - MGP_WSBEiJ_P0078187 Tamm41 protein_coding protein_coding MGP_WSBEiJ_T0078188.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116385727 116393856 - Tamm41 protein_coding retained_intron MGP_WSBEiJ_T0078189.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116385782 116408523 - MGP_WSBEiJ_P0078189 Tamm41 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078190.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116389511 116397695 - Tamm41 protein_coding retained_intron MGP_WSBEiJ_T0078191.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116392163 116414735 - MGP_WSBEiJ_P0078191 Tamm41 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078192.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116393535 116420326 - MGP_WSBEiJ_P0078192 Tamm41 protein_coding protein_coding MGP_WSBEiJ_T0078193.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116397522 116420296 - MGP_WSBEiJ_P0078193 Tamm41 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078194.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116407193 116420347 - Tamm41 protein_coding retained_intron MGP_WSBEiJ_T0078195.1 MGP_WSBEiJ_G0030315.1 mouse_genomes_project 6 116413748 116414736 - Tamm41 protein_coding processed_transcript MGP_WSBEiJ_T0079162.1 MGP_WSBEiJ_G0030514.1 mouse_genomes_project 6 131956727 131964361 + MGP_WSBEiJ_P0079162 Clec1b protein_coding protein_coding MGP_WSBEiJ_T0079163.1 MGP_WSBEiJ_G0030514.1 mouse_genomes_project 6 131956735 131964349 + MGP_WSBEiJ_P0079163 Clec1b protein_coding protein_coding MGP_WSBEiJ_T0079164.1 MGP_WSBEiJ_G0030514.1 mouse_genomes_project 6 131962670 131969416 + Clec1b protein_coding retained_intron MGP_WSBEiJ_T0002619.1 MGP_WSBEiJ_G0002509.1 mouse_genomes_project 6 38984763 38985200 + MGP_WSBEiJ_P0002619 Trbv13-2 TR_V_gene TR_V_gene MGP_WSBEiJ_T0008641.1 MGP_WSBEiJ_G0006985.1 mouse_genomes_project 6 151517661 151529720 + 1700049E15Rik lincRNA lincRNA MGP_WSBEiJ_T0008642.1 MGP_WSBEiJ_G0006985.1 mouse_genomes_project 6 151522143 151529694 + 1700049E15Rik lincRNA lincRNA MGP_WSBEiJ_T0078534.1 MGP_WSBEiJ_G0030375.1 mouse_genomes_project 6 122155110 122159979 - MGP_WSBEiJ_P0078534 Cecr6 protein_coding protein_coding MGP_WSBEiJ_T0098431.1 MGP_WSBEiJ_G0037094.1 mouse_genomes_project 6 97514230 97514327 - Gm22971 snRNA snRNA MGP_WSBEiJ_T0076481.1 MGP_WSBEiJ_G0029954.1 mouse_genomes_project 6 55401011 55402425 + Avl9 protein_coding retained_intron MGP_WSBEiJ_T0076482.1 MGP_WSBEiJ_G0029954.1 mouse_genomes_project 6 55401039 55446046 + MGP_WSBEiJ_P0076482 Avl9 protein_coding protein_coding MGP_WSBEiJ_T0076483.1 MGP_WSBEiJ_G0029954.1 mouse_genomes_project 6 55401050 55424509 + MGP_WSBEiJ_P0076483 Avl9 protein_coding protein_coding MGP_WSBEiJ_T0076484.1 MGP_WSBEiJ_G0029954.1 mouse_genomes_project 6 55401054 55415603 + MGP_WSBEiJ_P0076484 Avl9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076485.1 MGP_WSBEiJ_G0029954.1 mouse_genomes_project 6 55428264 55438172 + Avl9 protein_coding retained_intron MGP_WSBEiJ_T0000195.1 MGP_WSBEiJ_G0000146.1 mouse_genomes_project 6 69888195 69888820 - MGP_WSBEiJ_P0000195 IG_V_gene IG_V_gene MGP_WSBEiJ_T0074987.1 MGP_WSBEiJ_G0029611.1 mouse_genomes_project 6 2504350 2823714 + MGP_WSBEiJ_P0074987 Dync1i1 protein_coding protein_coding MGP_WSBEiJ_T0074988.1 MGP_WSBEiJ_G0029611.1 mouse_genomes_project 6 2504474 2823705 + MGP_WSBEiJ_P0074988 Dync1i1 protein_coding protein_coding MGP_WSBEiJ_T0074989.1 MGP_WSBEiJ_G0029611.1 mouse_genomes_project 6 2504502 2823714 + MGP_WSBEiJ_P0074989 Dync1i1 protein_coding protein_coding MGP_WSBEiJ_T0074990.1 MGP_WSBEiJ_G0029611.1 mouse_genomes_project 6 2504523 2823714 + MGP_WSBEiJ_P0074990 Dync1i1 protein_coding protein_coding MGP_WSBEiJ_T0074991.1 MGP_WSBEiJ_G0029611.1 mouse_genomes_project 6 2504529 2544947 + MGP_WSBEiJ_P0074991 Dync1i1 protein_coding protein_coding MGP_WSBEiJ_T0074992.1 MGP_WSBEiJ_G0029611.1 mouse_genomes_project 6 2535312 2563772 + MGP_WSBEiJ_P0074992 Dync1i1 protein_coding protein_coding MGP_WSBEiJ_T0074993.1 MGP_WSBEiJ_G0029611.1 mouse_genomes_project 6 2799065 2823462 + Dync1i1 protein_coding retained_intron MGP_WSBEiJ_T0076144.1 MGP_WSBEiJ_G0029874.1 mouse_genomes_project 6 46842688 46865855 + MGP_WSBEiJ_P0076144 Gm45021 protein_coding protein_coding MGP_WSBEiJ_T0075298.1 MGP_WSBEiJ_G0029676.1 mouse_genomes_project 6 22163043 22168197 - MGP_WSBEiJ_P0075298 Tmem229a protein_coding protein_coding MGP_WSBEiJ_T0076512.1 MGP_WSBEiJ_G0029967.1 mouse_genomes_project 6 55979346 55980876 + MGP_WSBEiJ_P0076512 Vmn1r14 protein_coding protein_coding MGP_WSBEiJ_T0002128.1 MGP_WSBEiJ_G0002047.1 mouse_genomes_project 6 144250680 144252946 - TEC TEC MGP_WSBEiJ_T0004877.1 MGP_WSBEiJ_G0004183.1 mouse_genomes_project 6 50667635 50675648 + Gm29430 antisense antisense MGP_WSBEiJ_T0004878.1 MGP_WSBEiJ_G0004183.1 mouse_genomes_project 6 50668286 50675575 + Gm29430 antisense antisense MGP_WSBEiJ_T0015011.1 MGP_WSBEiJ_G0013141.1 mouse_genomes_project 6 86911694 86912702 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014848.1 MGP_WSBEiJ_G0012978.1 mouse_genomes_project 6 37640047 37640621 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017674.1 MGP_WSBEiJ_G0015053.1 mouse_genomes_project 6 52815365 52824522 - Gm15527 processed_transcript retained_intron MGP_WSBEiJ_T0017675.1 MGP_WSBEiJ_G0015053.1 mouse_genomes_project 6 52817791 52848674 - Gm15527 processed_transcript antisense MGP_WSBEiJ_T0017676.1 MGP_WSBEiJ_G0015053.1 mouse_genomes_project 6 52817807 52848676 - Gm15527 processed_transcript antisense MGP_WSBEiJ_T0001963.1 MGP_WSBEiJ_G0001883.1 mouse_genomes_project 6 71354973 71357768 - TEC TEC MGP_WSBEiJ_T0078680.1 MGP_WSBEiJ_G0030406.1 mouse_genomes_project 6 124856696 124866760 + MGP_WSBEiJ_P0078680 Clec4a3 protein_coding protein_coding MGP_WSBEiJ_T0078681.1 MGP_WSBEiJ_G0030406.1 mouse_genomes_project 6 124856825 124866759 + MGP_WSBEiJ_P0078681 Clec4a3 protein_coding protein_coding MGP_WSBEiJ_T0078682.1 MGP_WSBEiJ_G0030406.1 mouse_genomes_project 6 124856959 124863864 + MGP_WSBEiJ_P0078682 Clec4a3 protein_coding protein_coding MGP_WSBEiJ_T0002670.1 MGP_WSBEiJ_G0002554.1 mouse_genomes_project 6 38954699 38954988 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0098443.1 MGP_WSBEiJ_G0037106.1 mouse_genomes_project 6 120381540 120381641 + Gm25905 snRNA snRNA MGP_WSBEiJ_T0000202.1 MGP_WSBEiJ_G0000152.1 mouse_genomes_project 6 70162609 70162914 - MGP_WSBEiJ_P0000202 Igkv8-27 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000205.1 MGP_WSBEiJ_G0000152.1 mouse_genomes_project 6 70162609 70162925 - MGP_WSBEiJ_P0000205 Igkv8-27 IG_V_gene IG_V_gene MGP_WSBEiJ_T0100307.1 MGP_WSBEiJ_G0038807.1 mouse_genomes_project 6 131511354 131527579 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100308.1 MGP_WSBEiJ_G0038807.1 mouse_genomes_project 6 131511442 131527500 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0077277.1 MGP_WSBEiJ_G0030139.1 mouse_genomes_project 6 86641257 86713223 + Add2 protein_coding retained_intron MGP_WSBEiJ_T0077278.1 MGP_WSBEiJ_G0030139.1 mouse_genomes_project 6 86641271 86734873 + MGP_WSBEiJ_P0077278 Add2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0077279.1 MGP_WSBEiJ_G0030139.1 mouse_genomes_project 6 86641323 86725556 + MGP_WSBEiJ_P0077279 Add2 protein_coding protein_coding MGP_WSBEiJ_T0077280.1 MGP_WSBEiJ_G0030139.1 mouse_genomes_project 6 86667018 86708450 + MGP_WSBEiJ_P0077280 Add2 protein_coding protein_coding MGP_WSBEiJ_T0077281.1 MGP_WSBEiJ_G0030139.1 mouse_genomes_project 6 86692991 86725554 + MGP_WSBEiJ_P0077281 Add2 protein_coding protein_coding MGP_WSBEiJ_T0077282.1 MGP_WSBEiJ_G0030139.1 mouse_genomes_project 6 86697739 86724385 + MGP_WSBEiJ_P0077282 Add2 protein_coding protein_coding MGP_WSBEiJ_T0077283.1 MGP_WSBEiJ_G0030139.1 mouse_genomes_project 6 86700805 86734893 + MGP_WSBEiJ_P0077283 Add2 protein_coding protein_coding MGP_WSBEiJ_T0076790.1 MGP_WSBEiJ_G0030040.1 mouse_genomes_project 6 72262042 72271461 + MGP_WSBEiJ_P0076790 Sftpb protein_coding protein_coding MGP_WSBEiJ_T0076791.1 MGP_WSBEiJ_G0030040.1 mouse_genomes_project 6 72262052 72271457 + MGP_WSBEiJ_P0076791 Sftpb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076792.1 MGP_WSBEiJ_G0030040.1 mouse_genomes_project 6 72262057 72270049 + MGP_WSBEiJ_P0076792 Sftpb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076793.1 MGP_WSBEiJ_G0030040.1 mouse_genomes_project 6 72262057 72270049 + MGP_WSBEiJ_P0076793 Sftpb protein_coding protein_coding MGP_WSBEiJ_T0076794.1 MGP_WSBEiJ_G0030040.1 mouse_genomes_project 6 72263539 72271162 + Sftpb protein_coding retained_intron MGP_WSBEiJ_T0004862.1 MGP_WSBEiJ_G0004173.1 mouse_genomes_project 6 40286445 40307604 - Gm44284 antisense antisense MGP_WSBEiJ_T0015044.1 MGP_WSBEiJ_G0013174.1 mouse_genomes_project 6 101881404 101881826 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075809.1 MGP_WSBEiJ_G0029766.1 mouse_genomes_project 6 36605386 36685574 + MGP_WSBEiJ_P0075809 Tbxas1 protein_coding protein_coding MGP_WSBEiJ_T0075810.1 MGP_WSBEiJ_G0029766.1 mouse_genomes_project 6 36650060 36827388 + MGP_WSBEiJ_P0075810 Tbxas1 protein_coding protein_coding MGP_WSBEiJ_T0075811.1 MGP_WSBEiJ_G0029766.1 mouse_genomes_project 6 36650085 36768097 + Tbxas1 protein_coding retained_intron MGP_WSBEiJ_T0075812.1 MGP_WSBEiJ_G0029766.1 mouse_genomes_project 6 36650104 36827388 + Tbxas1 protein_coding retained_intron MGP_WSBEiJ_T0075813.1 MGP_WSBEiJ_G0029766.1 mouse_genomes_project 6 36673986 36736673 + MGP_WSBEiJ_P0075813 Tbxas1 protein_coding protein_coding MGP_WSBEiJ_T0075814.1 MGP_WSBEiJ_G0029766.1 mouse_genomes_project 6 36705694 36717283 + Tbxas1 protein_coding processed_transcript MGP_WSBEiJ_T0075815.1 MGP_WSBEiJ_G0029766.1 mouse_genomes_project 6 36717066 36815446 + Tbxas1 protein_coding retained_intron MGP_WSBEiJ_T0008464.1 MGP_WSBEiJ_G0006848.1 mouse_genomes_project 6 50142083 50159668 - Gm44191 lincRNA lincRNA MGP_WSBEiJ_T0100882.1 MGP_WSBEiJ_G0039340.1 mouse_genomes_project 6 25765230 25765506 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0078779.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126862404 126865960 - Eno2 protein_coding retained_intron MGP_WSBEiJ_T0078780.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126862406 126873058 - MGP_WSBEiJ_P0078780 Eno2 protein_coding protein_coding MGP_WSBEiJ_T0078781.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126862406 126873110 - MGP_WSBEiJ_P0078781 Eno2 protein_coding protein_coding MGP_WSBEiJ_T0078782.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126862716 126871774 - Eno2 protein_coding retained_intron MGP_WSBEiJ_T0078783.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126863272 126872957 - MGP_WSBEiJ_P0078783 Eno2 protein_coding protein_coding MGP_WSBEiJ_T0078784.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126863505 126865634 - Eno2 protein_coding retained_intron MGP_WSBEiJ_T0078785.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126863564 126865670 - Eno2 protein_coding retained_intron MGP_WSBEiJ_T0078786.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126865004 126866269 - Eno2 protein_coding processed_transcript MGP_WSBEiJ_T0078787.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126866114 126871767 - MGP_WSBEiJ_P0078787 Eno2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078788.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126866217 126871813 - MGP_WSBEiJ_P0078788 Eno2 protein_coding protein_coding MGP_WSBEiJ_T0078789.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126869576 126872921 - MGP_WSBEiJ_P0078789 Eno2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078790.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126869657 126871768 - MGP_WSBEiJ_P0078790 Eno2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078791.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126869720 126872987 - MGP_WSBEiJ_P0078791 Eno2 protein_coding protein_coding MGP_WSBEiJ_T0078792.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126870205 126871774 - Eno2 protein_coding retained_intron MGP_WSBEiJ_T0078793.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126870383 126872953 - Eno2 protein_coding retained_intron MGP_WSBEiJ_T0078794.1 MGP_WSBEiJ_G0030433.1 mouse_genomes_project 6 126871144 126872923 - MGP_WSBEiJ_P0078794 Eno2 protein_coding protein_coding MGP_WSBEiJ_T0001988.1 MGP_WSBEiJ_G0001908.1 mouse_genomes_project 6 80307467 80310112 + TEC TEC MGP_WSBEiJ_T0014830.1 MGP_WSBEiJ_G0012960.1 mouse_genomes_project 6 24080971 24081713 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008566.1 MGP_WSBEiJ_G0006929.1 mouse_genomes_project 6 115102528 115104023 - 1700015O11Rik lincRNA lincRNA MGP_WSBEiJ_T0077189.1 MGP_WSBEiJ_G0030117.1 mouse_genomes_project 6 85615699 85631289 - MGP_WSBEiJ_P0077189 Spr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077190.1 MGP_WSBEiJ_G0030117.1 mouse_genomes_project 6 85626778 85631289 - MGP_WSBEiJ_P0077190 Spr protein_coding protein_coding MGP_WSBEiJ_T0077191.1 MGP_WSBEiJ_G0030117.1 mouse_genomes_project 6 85626787 85631279 - MGP_WSBEiJ_P0077191 Spr protein_coding protein_coding MGP_WSBEiJ_T0077192.1 MGP_WSBEiJ_G0030117.1 mouse_genomes_project 6 85627100 85631285 - MGP_WSBEiJ_P0077192 Spr protein_coding protein_coding MGP_WSBEiJ_T0077772.1 MGP_WSBEiJ_G0030240.1 mouse_genomes_project 6 97139197 97699570 + MGP_WSBEiJ_P0077772 Fam19a1 protein_coding protein_coding MGP_WSBEiJ_T0077773.1 MGP_WSBEiJ_G0030240.1 mouse_genomes_project 6 97139285 97157642 + Fam19a1 protein_coding processed_transcript MGP_WSBEiJ_T0077774.1 MGP_WSBEiJ_G0030240.1 mouse_genomes_project 6 97140633 97141897 + Fam19a1 protein_coding processed_transcript MGP_WSBEiJ_T0077775.1 MGP_WSBEiJ_G0030240.1 mouse_genomes_project 6 97141290 97698840 + MGP_WSBEiJ_P0077775 Fam19a1 protein_coding protein_coding MGP_WSBEiJ_T0015118.1 MGP_WSBEiJ_G0013248.1 mouse_genomes_project 6 126273578 126274512 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076588.1 MGP_WSBEiJ_G0029997.1 mouse_genomes_project 6 60132154 60155424 + Mmrn1 protein_coding retained_intron MGP_WSBEiJ_T0076589.1 MGP_WSBEiJ_G0029997.1 mouse_genomes_project 6 60153782 60199552 + MGP_WSBEiJ_P0076589 Mmrn1 protein_coding protein_coding MGP_WSBEiJ_T0076590.1 MGP_WSBEiJ_G0029997.1 mouse_genomes_project 6 60153784 60199552 + MGP_WSBEiJ_P0076590 Mmrn1 protein_coding protein_coding MGP_WSBEiJ_T0098404.1 MGP_WSBEiJ_G0037067.1 mouse_genomes_project 6 18197612 18197715 + Gm26373 snRNA snRNA MGP_WSBEiJ_T0008520.1 MGP_WSBEiJ_G0006893.1 mouse_genomes_project 6 87159012 87161379 - Gm44386 lincRNA lincRNA MGP_WSBEiJ_T0008562.1 MGP_WSBEiJ_G0006925.1 mouse_genomes_project 6 109053811 109059438 + 4933431M02Rik lincRNA lincRNA MGP_WSBEiJ_T0011441.1 MGP_WSBEiJ_G0009598.1 mouse_genomes_project 6 50640238 50640363 + Gm27867 misc_RNA misc_RNA MGP_WSBEiJ_T0076878.1 MGP_WSBEiJ_G0030057.1 mouse_genomes_project 6 73051485 73263662 - MGP_WSBEiJ_P0076878 Dnah6 protein_coding protein_coding MGP_WSBEiJ_T0076879.1 MGP_WSBEiJ_G0030057.1 mouse_genomes_project 6 73051488 73263682 - MGP_WSBEiJ_P0076879 Dnah6 protein_coding protein_coding MGP_WSBEiJ_T0076880.1 MGP_WSBEiJ_G0030057.1 mouse_genomes_project 6 73051621 73261767 - MGP_WSBEiJ_P0076880 Dnah6 protein_coding protein_coding MGP_WSBEiJ_T0076881.1 MGP_WSBEiJ_G0030057.1 mouse_genomes_project 6 73121653 73173448 - Dnah6 protein_coding retained_intron MGP_WSBEiJ_T0076635.1 MGP_WSBEiJ_G0030005.1 mouse_genomes_project 6 64950236 64994106 + MGP_WSBEiJ_P0076635 Ndnf protein_coding protein_coding MGP_WSBEiJ_T0076636.1 MGP_WSBEiJ_G0030005.1 mouse_genomes_project 6 64982394 64984405 + Ndnf protein_coding retained_intron MGP_WSBEiJ_T0015008.1 MGP_WSBEiJ_G0013138.1 mouse_genomes_project 6 86485703 86486339 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100892.1 MGP_WSBEiJ_G0039350.1 mouse_genomes_project 6 40693707 40694055 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004930.1 MGP_WSBEiJ_G0004219.1 mouse_genomes_project 6 87173240 87205166 + 1600020E01Rik antisense antisense MGP_WSBEiJ_T0004931.1 MGP_WSBEiJ_G0004219.1 mouse_genomes_project 6 87173240 87218449 + 1600020E01Rik antisense antisense MGP_WSBEiJ_T0004932.1 MGP_WSBEiJ_G0004219.1 mouse_genomes_project 6 87173264 87218449 + 1600020E01Rik antisense antisense MGP_WSBEiJ_T0004933.1 MGP_WSBEiJ_G0004219.1 mouse_genomes_project 6 87173798 87236014 + 1600020E01Rik antisense antisense MGP_WSBEiJ_T0004934.1 MGP_WSBEiJ_G0004219.1 mouse_genomes_project 6 87174307 87218449 + 1600020E01Rik antisense antisense MGP_WSBEiJ_T0004935.1 MGP_WSBEiJ_G0004219.1 mouse_genomes_project 6 87174389 87218448 + 1600020E01Rik antisense antisense MGP_WSBEiJ_T0004936.1 MGP_WSBEiJ_G0004219.1 mouse_genomes_project 6 87174462 87217507 + 1600020E01Rik antisense antisense MGP_WSBEiJ_T0004937.1 MGP_WSBEiJ_G0004219.1 mouse_genomes_project 6 87202072 87236444 + 1600020E01Rik antisense antisense MGP_WSBEiJ_T0002122.1 MGP_WSBEiJ_G0002041.1 mouse_genomes_project 6 141059435 141061022 - TEC TEC MGP_WSBEiJ_T0079695.1 MGP_WSBEiJ_G0030649.1 mouse_genomes_project 6 149739442 149773662 + MGP_WSBEiJ_P0079695 Sspn protein_coding protein_coding MGP_WSBEiJ_T0079696.1 MGP_WSBEiJ_G0030649.1 mouse_genomes_project 6 149742599 149773662 + MGP_WSBEiJ_P0079696 Sspn protein_coding protein_coding MGP_WSBEiJ_T0079697.1 MGP_WSBEiJ_G0030649.1 mouse_genomes_project 6 149761898 149773662 + MGP_WSBEiJ_P0079697 Sspn protein_coding protein_coding MGP_WSBEiJ_T0097222.1 MGP_WSBEiJ_G0035903.1 mouse_genomes_project 6 127248920 127249056 + Gm23751 scaRNA scaRNA MGP_WSBEiJ_T0000153.1 MGP_WSBEiJ_G0000116.1 mouse_genomes_project 6 67366901 67367388 - MGP_WSBEiJ_P0000153 Igkv9-123 IG_V_gene IG_V_gene MGP_WSBEiJ_T0014897.1 MGP_WSBEiJ_G0013027.1 mouse_genomes_project 6 51361450 51362043 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075978.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306371 40307890 + MGP_WSBEiJ_P0075978 Zyx protein_coding protein_coding MGP_WSBEiJ_T0075979.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306521 40308349 + MGP_WSBEiJ_P0075979 Zyx protein_coding protein_coding MGP_WSBEiJ_T0075980.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306569 40315299 + MGP_WSBEiJ_P0075980 Zyx protein_coding protein_coding MGP_WSBEiJ_T0075981.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306610 40315130 + MGP_WSBEiJ_P0075981 Zyx protein_coding protein_coding MGP_WSBEiJ_T0075982.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306774 40315130 + Zyx protein_coding retained_intron MGP_WSBEiJ_T0075983.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306774 40315130 + MGP_WSBEiJ_P0075983 Zyx protein_coding protein_coding MGP_WSBEiJ_T0075984.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306779 40308506 + Zyx protein_coding processed_transcript MGP_WSBEiJ_T0075985.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306780 40316950 + MGP_WSBEiJ_P0075985 Zyx protein_coding protein_coding MGP_WSBEiJ_T0075986.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40306812 40307806 + MGP_WSBEiJ_P0075986 Zyx protein_coding protein_coding MGP_WSBEiJ_T0075987.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40310219 40312773 + Zyx protein_coding processed_transcript MGP_WSBEiJ_T0075988.1 MGP_WSBEiJ_G0029824.1 mouse_genomes_project 6 40311872 40312997 + Zyx protein_coding processed_transcript MGP_WSBEiJ_T0001948.1 MGP_WSBEiJ_G0001868.1 mouse_genomes_project 6 52208019 52210219 + TEC TEC MGP_WSBEiJ_T0099641.1 MGP_WSBEiJ_G0038304.1 mouse_genomes_project 6 36750402 36750528 + Gm23010 snoRNA snoRNA MGP_WSBEiJ_T0004994.1 MGP_WSBEiJ_G0004259.1 mouse_genomes_project 6 122644291 122645254 + Gm43916 antisense antisense MGP_WSBEiJ_T0100944.1 MGP_WSBEiJ_G0039401.1 mouse_genomes_project 6 135931097 135932089 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0077071.1 MGP_WSBEiJ_G0030098.1 mouse_genomes_project 6 83713507 83721898 + Mob1a protein_coding processed_transcript MGP_WSBEiJ_T0077072.1 MGP_WSBEiJ_G0030098.1 mouse_genomes_project 6 83713525 83719922 + MGP_WSBEiJ_P0077072 Mob1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077073.1 MGP_WSBEiJ_G0030098.1 mouse_genomes_project 6 83713743 83732213 + MGP_WSBEiJ_P0077073 Mob1a protein_coding protein_coding MGP_WSBEiJ_T0078671.1 MGP_WSBEiJ_G0030402.1 mouse_genomes_project 6 124725712 124757353 + MGP_WSBEiJ_P0078671 Foxj2 protein_coding protein_coding MGP_WSBEiJ_T0078672.1 MGP_WSBEiJ_G0030402.1 mouse_genomes_project 6 124726309 124757328 + MGP_WSBEiJ_P0078672 Foxj2 protein_coding protein_coding MGP_WSBEiJ_T0078673.1 MGP_WSBEiJ_G0030402.1 mouse_genomes_project 6 124733303 124745221 + MGP_WSBEiJ_P0078673 Foxj2 protein_coding protein_coding MGP_WSBEiJ_T0079053.1 MGP_WSBEiJ_G0030486.1 mouse_genomes_project 6 130259918 130336124 - MGP_WSBEiJ_P0079053 Tspan9 protein_coding protein_coding MGP_WSBEiJ_T0079054.1 MGP_WSBEiJ_G0030486.1 mouse_genomes_project 6 130263779 130265370 - Tspan9 protein_coding retained_intron MGP_WSBEiJ_T0079055.1 MGP_WSBEiJ_G0030486.1 mouse_genomes_project 6 130264314 130336628 - MGP_WSBEiJ_P0079055 Tspan9 protein_coding protein_coding MGP_WSBEiJ_T0079056.1 MGP_WSBEiJ_G0030486.1 mouse_genomes_project 6 130264983 130451802 - MGP_WSBEiJ_P0079056 Tspan9 protein_coding protein_coding MGP_WSBEiJ_T0079057.1 MGP_WSBEiJ_G0030486.1 mouse_genomes_project 6 130264989 130448976 - MGP_WSBEiJ_P0079057 Tspan9 protein_coding protein_coding MGP_WSBEiJ_T0079058.1 MGP_WSBEiJ_G0030486.1 mouse_genomes_project 6 130265633 130451795 - MGP_WSBEiJ_P0079058 Tspan9 protein_coding protein_coding MGP_WSBEiJ_T0079059.1 MGP_WSBEiJ_G0030486.1 mouse_genomes_project 6 130265718 130430326 - MGP_WSBEiJ_P0079059 Tspan9 protein_coding protein_coding MGP_WSBEiJ_T0079060.1 MGP_WSBEiJ_G0030486.1 mouse_genomes_project 6 130385506 130451836 - Tspan9 protein_coding processed_transcript MGP_WSBEiJ_T0008572.1 MGP_WSBEiJ_G0006935.1 mouse_genomes_project 6 119075944 119084406 + Gm9946 lincRNA lincRNA MGP_WSBEiJ_T0008573.1 MGP_WSBEiJ_G0006935.1 mouse_genomes_project 6 119075944 119088580 + Gm9946 lincRNA lincRNA MGP_WSBEiJ_T0008574.1 MGP_WSBEiJ_G0006935.1 mouse_genomes_project 6 119083884 119084268 + Gm9946 lincRNA lincRNA MGP_WSBEiJ_T0002114.1 MGP_WSBEiJ_G0002033.1 mouse_genomes_project 6 137478293 137478989 - TEC TEC MGP_WSBEiJ_T0075211.1 MGP_WSBEiJ_G0029652.1 mouse_genomes_project 6 15862644 15875089 + MGP_WSBEiJ_P0075211 Ankrd7 protein_coding protein_coding MGP_WSBEiJ_T0075212.1 MGP_WSBEiJ_G0029652.1 mouse_genomes_project 6 15862676 15875085 + MGP_WSBEiJ_P0075212 Ankrd7 protein_coding protein_coding MGP_WSBEiJ_T0002087.1 MGP_WSBEiJ_G0002007.1 mouse_genomes_project 6 119422384 119425234 - TEC TEC MGP_WSBEiJ_T0002088.1 MGP_WSBEiJ_G0002007.1 mouse_genomes_project 6 119424594 119425235 - TEC TEC MGP_WSBEiJ_T0008421.1 MGP_WSBEiJ_G0006820.1 mouse_genomes_project 6 30234535 30235195 - BC049739 lincRNA lincRNA MGP_WSBEiJ_T0000145.1 MGP_WSBEiJ_G0000110.1 mouse_genomes_project 6 67121346 67437407 - MGP_WSBEiJ_P0000145 IG_V_gene IG_V_gene MGP_WSBEiJ_T0002127.1 MGP_WSBEiJ_G0002046.1 mouse_genomes_project 6 143917165 143917832 + TEC TEC MGP_WSBEiJ_T0015129.1 MGP_WSBEiJ_G0013259.1 mouse_genomes_project 6 129422347 129424762 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011447.1 MGP_WSBEiJ_G0009604.1 mouse_genomes_project 6 50733799 50733890 + Gm27695 misc_RNA misc_RNA MGP_WSBEiJ_T0075092.1 MGP_WSBEiJ_G0029634.1 mouse_genomes_project 6 10470856 10527358 - MGP_WSBEiJ_P0075092 Bmt2 protein_coding protein_coding MGP_WSBEiJ_T0075093.1 MGP_WSBEiJ_G0029634.1 mouse_genomes_project 6 10471993 10527330 - MGP_WSBEiJ_P0075093 Bmt2 protein_coding protein_coding MGP_WSBEiJ_T0079238.1 MGP_WSBEiJ_G0030542.1 mouse_genomes_project 6 135173852 135177994 - MGP_WSBEiJ_P0079238 protein_coding protein_coding MGP_WSBEiJ_T0011434.1 MGP_WSBEiJ_G0009591.1 mouse_genomes_project 6 27538517 27538844 - Gm25580 misc_RNA misc_RNA MGP_WSBEiJ_T0079688.1 MGP_WSBEiJ_G0030647.1 mouse_genomes_project 6 149550031 149628925 + MGP_WSBEiJ_P0079688 Rassf8 protein_coding protein_coding MGP_WSBEiJ_T0079689.1 MGP_WSBEiJ_G0030647.1 mouse_genomes_project 6 149553849 149623037 + MGP_WSBEiJ_P0079689 Rassf8 protein_coding protein_coding MGP_WSBEiJ_T0079690.1 MGP_WSBEiJ_G0030647.1 mouse_genomes_project 6 149615117 149625429 + MGP_WSBEiJ_P0079690 Rassf8 protein_coding protein_coding MGP_WSBEiJ_T0079691.1 MGP_WSBEiJ_G0030647.1 mouse_genomes_project 6 149627789 149628920 + MGP_WSBEiJ_P0079691 Rassf8 protein_coding protein_coding MGP_WSBEiJ_T0077695.1 MGP_WSBEiJ_G0030223.1 mouse_genomes_project 6 92751374 92758324 + Ccdc174 protein_coding retained_intron MGP_WSBEiJ_T0077696.1 MGP_WSBEiJ_G0030223.1 mouse_genomes_project 6 92751374 92773593 + MGP_WSBEiJ_P0077696 Ccdc174 protein_coding protein_coding MGP_WSBEiJ_T0077697.1 MGP_WSBEiJ_G0030223.1 mouse_genomes_project 6 92751374 92773593 + MGP_WSBEiJ_P0077697 Ccdc174 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077698.1 MGP_WSBEiJ_G0030223.1 mouse_genomes_project 6 92751393 92753845 + Ccdc174 protein_coding retained_intron MGP_WSBEiJ_T0077699.1 MGP_WSBEiJ_G0030223.1 mouse_genomes_project 6 92751396 92761648 + Ccdc174 protein_coding retained_intron MGP_WSBEiJ_T0077700.1 MGP_WSBEiJ_G0030223.1 mouse_genomes_project 6 92766100 92769043 + Ccdc174 protein_coding retained_intron MGP_WSBEiJ_T0077701.1 MGP_WSBEiJ_G0030223.1 mouse_genomes_project 6 92766557 92769089 + Ccdc174 protein_coding retained_intron MGP_WSBEiJ_T0079214.1 MGP_WSBEiJ_G0030531.1 mouse_genomes_project 6 134192248 134193610 - Magohb protein_coding retained_intron MGP_WSBEiJ_T0079215.1 MGP_WSBEiJ_G0030531.1 mouse_genomes_project 6 134192258 134201675 - MGP_WSBEiJ_P0079215 Magohb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079216.1 MGP_WSBEiJ_G0030531.1 mouse_genomes_project 6 134192364 134201709 - MGP_WSBEiJ_P0079216 Magohb protein_coding protein_coding MGP_WSBEiJ_T0079217.1 MGP_WSBEiJ_G0030531.1 mouse_genomes_project 6 134192400 134198237 - Magohb protein_coding retained_intron MGP_WSBEiJ_T0079218.1 MGP_WSBEiJ_G0030531.1 mouse_genomes_project 6 134192436 134201695 - MGP_WSBEiJ_P0079218 Magohb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079219.1 MGP_WSBEiJ_G0030531.1 mouse_genomes_project 6 134195913 134201695 - MGP_WSBEiJ_P0079219 Magohb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008476.1 MGP_WSBEiJ_G0006856.1 mouse_genomes_project 6 53781036 53793794 + Gm43995 lincRNA lincRNA MGP_WSBEiJ_T0002516.1 MGP_WSBEiJ_G0002425.1 mouse_genomes_project 6 39422676 39422727 + MGP_WSBEiJ_P0002516 Trbj1-4 TR_J_gene TR_J_gene MGP_WSBEiJ_T0076014.1 MGP_WSBEiJ_G0029838.1 mouse_genomes_project 6 40759182 40760137 + MGP_WSBEiJ_P0076014 Olfr452 protein_coding protein_coding MGP_WSBEiJ_T0002080.1 MGP_WSBEiJ_G0002000.1 mouse_genomes_project 6 115199165 115199860 + TEC TEC MGP_WSBEiJ_T0004978.1 MGP_WSBEiJ_G0004246.1 mouse_genomes_project 6 114509520 114520770 - antisense antisense MGP_WSBEiJ_T0004979.1 MGP_WSBEiJ_G0004246.1 mouse_genomes_project 6 114509751 114520756 - antisense antisense MGP_WSBEiJ_T0004980.1 MGP_WSBEiJ_G0004246.1 mouse_genomes_project 6 114512490 114520789 - antisense antisense MGP_WSBEiJ_T0004981.1 MGP_WSBEiJ_G0004246.1 mouse_genomes_project 6 114512866 114520912 - antisense antisense MGP_WSBEiJ_T0076806.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72320730 72323124 - Rnf181 protein_coding retained_intron MGP_WSBEiJ_T0076807.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72320730 72323394 - MGP_WSBEiJ_P0076807 Rnf181 protein_coding protein_coding MGP_WSBEiJ_T0076808.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72320730 72323433 - MGP_WSBEiJ_P0076808 Rnf181 protein_coding protein_coding MGP_WSBEiJ_T0076809.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72320888 72323361 - MGP_WSBEiJ_P0076809 Rnf181 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076810.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321100 72322397 - MGP_WSBEiJ_P0076810 Rnf181 protein_coding protein_coding MGP_WSBEiJ_T0076811.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321261 72327944 - MGP_WSBEiJ_P0076811 Rnf181 protein_coding protein_coding MGP_WSBEiJ_T0076812.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321267 72323345 - MGP_WSBEiJ_P0076812 Rnf181 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076813.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321293 72323391 - MGP_WSBEiJ_P0076813 Rnf181 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076814.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321294 72323364 - MGP_WSBEiJ_P0076814 Rnf181 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076815.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321304 72323383 - MGP_WSBEiJ_P0076815 Rnf181 protein_coding protein_coding MGP_WSBEiJ_T0076816.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321352 72323366 - MGP_WSBEiJ_P0076816 Rnf181 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076817.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321434 72322068 - Rnf181 protein_coding retained_intron MGP_WSBEiJ_T0076818.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72321629 72323429 - Rnf181 protein_coding retained_intron MGP_WSBEiJ_T0076819.1 MGP_WSBEiJ_G0030044.1 mouse_genomes_project 6 72322029 72322996 - Rnf181 protein_coding retained_intron MGP_WSBEiJ_T0076653.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66220755 66345622 + MGP_WSBEiJ_P0076653 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0076654.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66220781 66342201 + MGP_WSBEiJ_P0076654 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0076655.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66220789 66342545 + MGP_WSBEiJ_P0076655 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0076656.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66220792 66342561 + MGP_WSBEiJ_P0076656 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0076657.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66220795 66342173 + MGP_WSBEiJ_P0076657 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0076658.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66220798 66343358 + MGP_WSBEiJ_P0076658 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0076659.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66220814 66342120 + MGP_WSBEiJ_P0076659 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0076660.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66220907 66342418 + MGP_WSBEiJ_P0076660 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0076661.1 MGP_WSBEiJ_G0030013.1 mouse_genomes_project 6 66221249 66341839 + MGP_WSBEiJ_P0076661 Gng12 protein_coding protein_coding MGP_WSBEiJ_T0075186.1 MGP_WSBEiJ_G0029647.1 mouse_genomes_project 6 14974976 15017296 - MGP_WSBEiJ_P0075186 Wnt2 protein_coding protein_coding MGP_WSBEiJ_T0004902.1 MGP_WSBEiJ_G0004202.1 mouse_genomes_project 6 73046008 73054138 + Gm44031 antisense antisense MGP_WSBEiJ_T0077178.1 MGP_WSBEiJ_G0030114.1 mouse_genomes_project 6 85050388 85067008 - MGP_WSBEiJ_P0077178 Cyp26b1 protein_coding protein_coding MGP_WSBEiJ_T0077179.1 MGP_WSBEiJ_G0030114.1 mouse_genomes_project 6 85053213 85067008 - MGP_WSBEiJ_P0077179 Cyp26b1 protein_coding protein_coding MGP_WSBEiJ_T0005039.1 MGP_WSBEiJ_G0004298.1 mouse_genomes_project 6 148203791 148223821 + Sox5os2 antisense antisense MGP_WSBEiJ_T0075818.1 MGP_WSBEiJ_G0029768.1 mouse_genomes_project 6 36878889 36954599 - MGP_WSBEiJ_P0075818 Kdm7a protein_coding protein_coding MGP_WSBEiJ_T0075819.1 MGP_WSBEiJ_G0029768.1 mouse_genomes_project 6 36885423 36898026 - Kdm7a protein_coding processed_transcript MGP_WSBEiJ_T0075408.1 MGP_WSBEiJ_G0029698.1 mouse_genomes_project 6 26816202 26818982 + MGP_WSBEiJ_P0075408 Atp6v1f protein_coding protein_coding MGP_WSBEiJ_T0075409.1 MGP_WSBEiJ_G0029698.1 mouse_genomes_project 6 26816552 26818982 + MGP_WSBEiJ_P0075409 Atp6v1f protein_coding protein_coding MGP_WSBEiJ_T0075410.1 MGP_WSBEiJ_G0029698.1 mouse_genomes_project 6 26816552 26818982 + MGP_WSBEiJ_P0075410 Atp6v1f protein_coding protein_coding MGP_WSBEiJ_T0002020.1 MGP_WSBEiJ_G0001940.1 mouse_genomes_project 6 88513427 88514292 - TEC TEC MGP_WSBEiJ_T0002023.1 MGP_WSBEiJ_G0001943.1 mouse_genomes_project 6 88697409 88700947 + TEC TEC MGP_WSBEiJ_T0099695.1 MGP_WSBEiJ_G0038358.1 mouse_genomes_project 6 147170919 147171056 - Gm23272 snoRNA snoRNA MGP_WSBEiJ_T0076687.1 MGP_WSBEiJ_G0030017.1 mouse_genomes_project 6 66787514 66859999 - MGP_WSBEiJ_P0076687 Il23r protein_coding protein_coding MGP_WSBEiJ_T0078249.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117293588 117364792 + MGP_WSBEiJ_P0078249 Ift122 protein_coding protein_coding MGP_WSBEiJ_T0078250.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117293648 117364782 + MGP_WSBEiJ_P0078250 Ift122 protein_coding protein_coding MGP_WSBEiJ_T0078251.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117293698 117364785 + MGP_WSBEiJ_P0078251 Ift122 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078252.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117293706 117296202 + Ift122 protein_coding retained_intron MGP_WSBEiJ_T0078253.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117293753 117364423 + MGP_WSBEiJ_P0078253 Ift122 protein_coding protein_coding MGP_WSBEiJ_T0078254.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117293763 117312291 + Ift122 protein_coding processed_transcript MGP_WSBEiJ_T0078255.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117314260 117324343 + Ift122 protein_coding processed_transcript MGP_WSBEiJ_T0078256.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117322895 117324348 + Ift122 protein_coding processed_transcript MGP_WSBEiJ_T0078257.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117324127 117325820 + Ift122 protein_coding retained_intron MGP_WSBEiJ_T0078258.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117331046 117336680 + Ift122 protein_coding retained_intron MGP_WSBEiJ_T0078259.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117336170 117364786 + Ift122 protein_coding processed_transcript MGP_WSBEiJ_T0078260.1 MGP_WSBEiJ_G0030329.1 mouse_genomes_project 6 117339687 117364787 + Ift122 protein_coding retained_intron MGP_WSBEiJ_T0000179.1 MGP_WSBEiJ_G0000135.1 mouse_genomes_project 6 68574748 68575214 + MGP_WSBEiJ_P0000179 Igkv13-84 IG_V_gene IG_V_gene MGP_WSBEiJ_T0078331.1 MGP_WSBEiJ_G0030342.1 mouse_genomes_project 6 118087465 118088559 - MGP_WSBEiJ_P0078331 Olfr215 protein_coding protein_coding MGP_WSBEiJ_T0008558.1 MGP_WSBEiJ_G0006921.1 mouse_genomes_project 6 103113362 103120232 + Gm44176 lincRNA lincRNA MGP_WSBEiJ_T0077919.1 MGP_WSBEiJ_G0030270.1 mouse_genomes_project 6 109529050 109613513 - MGP_WSBEiJ_P0077919 Sumf1 protein_coding protein_coding MGP_WSBEiJ_T0077920.1 MGP_WSBEiJ_G0030270.1 mouse_genomes_project 6 109530369 109550970 - Sumf1 protein_coding processed_transcript MGP_WSBEiJ_T0077921.1 MGP_WSBEiJ_G0030270.1 mouse_genomes_project 6 109530498 109613487 - MGP_WSBEiJ_P0077921 Sumf1 protein_coding protein_coding MGP_WSBEiJ_T0077922.1 MGP_WSBEiJ_G0030270.1 mouse_genomes_project 6 109530498 109613487 - MGP_WSBEiJ_P0077922 Sumf1 protein_coding protein_coding MGP_WSBEiJ_T0077923.1 MGP_WSBEiJ_G0030270.1 mouse_genomes_project 6 109541571 109571435 - MGP_WSBEiJ_P0077923 Sumf1 protein_coding protein_coding MGP_WSBEiJ_T0077924.1 MGP_WSBEiJ_G0030270.1 mouse_genomes_project 6 109571052 109579706 - Sumf1 protein_coding retained_intron MGP_WSBEiJ_T0076938.1 MGP_WSBEiJ_G0030072.1 mouse_genomes_project 6 82369146 82422199 + MGP_WSBEiJ_P0076938 Eva1a protein_coding protein_coding MGP_WSBEiJ_T0076939.1 MGP_WSBEiJ_G0030072.1 mouse_genomes_project 6 82370603 82423404 + MGP_WSBEiJ_P0076939 Eva1a protein_coding protein_coding MGP_WSBEiJ_T0076940.1 MGP_WSBEiJ_G0030072.1 mouse_genomes_project 6 82370668 82376135 + Eva1a protein_coding processed_transcript MGP_WSBEiJ_T0076941.1 MGP_WSBEiJ_G0030072.1 mouse_genomes_project 6 82381311 82422464 + MGP_WSBEiJ_P0076941 Eva1a protein_coding protein_coding MGP_WSBEiJ_T0002148.1 MGP_WSBEiJ_G0002067.1 mouse_genomes_project 6 153495975 153500852 + TEC TEC MGP_WSBEiJ_T0077616.1 MGP_WSBEiJ_G0030210.1 mouse_genomes_project 6 91297867 91372598 + Aldh1l1 protein_coding processed_transcript MGP_WSBEiJ_T0077617.1 MGP_WSBEiJ_G0030210.1 mouse_genomes_project 6 91364001 91412812 + MGP_WSBEiJ_P0077617 Aldh1l1 protein_coding protein_coding MGP_WSBEiJ_T0077618.1 MGP_WSBEiJ_G0030210.1 mouse_genomes_project 6 91364017 91411778 + MGP_WSBEiJ_P0077618 Aldh1l1 protein_coding protein_coding MGP_WSBEiJ_T0077619.1 MGP_WSBEiJ_G0030210.1 mouse_genomes_project 6 91364055 91373173 + MGP_WSBEiJ_P0077619 Aldh1l1 protein_coding protein_coding MGP_WSBEiJ_T0077620.1 MGP_WSBEiJ_G0030210.1 mouse_genomes_project 6 91364060 91411769 + MGP_WSBEiJ_P0077620 Aldh1l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077621.1 MGP_WSBEiJ_G0030210.1 mouse_genomes_project 6 91380903 91384084 + Aldh1l1 protein_coding processed_transcript MGP_WSBEiJ_T0077622.1 MGP_WSBEiJ_G0030210.1 mouse_genomes_project 6 91401948 91409674 + Aldh1l1 protein_coding retained_intron MGP_WSBEiJ_T0099653.1 MGP_WSBEiJ_G0038316.1 mouse_genomes_project 6 56642545 56642674 - Gm25726 snoRNA snoRNA MGP_WSBEiJ_T0099691.1 MGP_WSBEiJ_G0038354.1 mouse_genomes_project 6 127391247 127391376 - Gm24175 snoRNA snoRNA MGP_WSBEiJ_T0079388.1 MGP_WSBEiJ_G0030592.1 mouse_genomes_project 6 140219327 140237473 + BC049715 protein_coding retained_intron MGP_WSBEiJ_T0079389.1 MGP_WSBEiJ_G0030592.1 mouse_genomes_project 6 140219681 140242544 + MGP_WSBEiJ_P0079389 BC049715 protein_coding protein_coding MGP_WSBEiJ_T0079390.1 MGP_WSBEiJ_G0030592.1 mouse_genomes_project 6 140220536 140243282 + MGP_WSBEiJ_P0079390 BC049715 protein_coding protein_coding MGP_WSBEiJ_T0079393.1 MGP_WSBEiJ_G0030592.1 mouse_genomes_project 6 140222599 140243408 + MGP_WSBEiJ_P0079393 BC049715 protein_coding protein_coding MGP_WSBEiJ_T0079394.1 MGP_WSBEiJ_G0030592.1 mouse_genomes_project 6 140242509 140243253 + MGP_WSBEiJ_P0079394 BC049715 protein_coding protein_coding MGP_WSBEiJ_T0078381.1 MGP_WSBEiJ_G0030352.1 mouse_genomes_project 6 119598577 119624429 + MGP_WSBEiJ_P0078381 Rasgef1a protein_coding protein_coding MGP_WSBEiJ_T0078382.1 MGP_WSBEiJ_G0030352.1 mouse_genomes_project 6 119598577 119624500 + MGP_WSBEiJ_P0078382 Rasgef1a protein_coding protein_coding MGP_WSBEiJ_T0078383.1 MGP_WSBEiJ_G0030352.1 mouse_genomes_project 6 119610008 119625477 + MGP_WSBEiJ_P0078383 Rasgef1a protein_coding unknown_likely_coding MGP_WSBEiJ_T0075617.1 MGP_WSBEiJ_G0029729.1 mouse_genomes_project 6 31678487 31702173 - MGP_WSBEiJ_P0075617 Slc35b4 protein_coding protein_coding MGP_WSBEiJ_T0075618.1 MGP_WSBEiJ_G0029729.1 mouse_genomes_project 6 31681827 31688581 - Slc35b4 protein_coding retained_intron MGP_WSBEiJ_T0075619.1 MGP_WSBEiJ_G0029729.1 mouse_genomes_project 6 31683189 31702032 - Slc35b4 protein_coding retained_intron MGP_WSBEiJ_T0075620.1 MGP_WSBEiJ_G0029729.1 mouse_genomes_project 6 31685622 31702144 - MGP_WSBEiJ_P0075620 Slc35b4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075571.1 MGP_WSBEiJ_G0029721.1 mouse_genomes_project 6 28381543 28384597 - MGP_WSBEiJ_P0075571 Klf14 protein_coding protein_coding MGP_WSBEiJ_T0008485.1 MGP_WSBEiJ_G0006865.1 mouse_genomes_project 6 65775222 65783899 - lincRNA lincRNA MGP_WSBEiJ_T0008486.1 MGP_WSBEiJ_G0006865.1 mouse_genomes_project 6 65777465 65783938 - lincRNA lincRNA MGP_WSBEiJ_T0002109.1 MGP_WSBEiJ_G0002028.1 mouse_genomes_project 6 132109534 132110225 + TEC TEC MGP_WSBEiJ_T0078158.1 MGP_WSBEiJ_G0030312.1 mouse_genomes_project 6 115904675 115994829 + MGP_WSBEiJ_P0078158 Hrh1 protein_coding protein_coding MGP_WSBEiJ_T0078159.1 MGP_WSBEiJ_G0030312.1 mouse_genomes_project 6 115904825 115991397 + MGP_WSBEiJ_P0078159 Hrh1 protein_coding protein_coding MGP_WSBEiJ_T0078160.1 MGP_WSBEiJ_G0030312.1 mouse_genomes_project 6 115910406 115994001 + MGP_WSBEiJ_P0078160 Hrh1 protein_coding protein_coding MGP_WSBEiJ_T0078161.1 MGP_WSBEiJ_G0030312.1 mouse_genomes_project 6 115910562 115993935 + MGP_WSBEiJ_P0078161 Hrh1 protein_coding protein_coding MGP_WSBEiJ_T0078162.1 MGP_WSBEiJ_G0030312.1 mouse_genomes_project 6 115965189 115993999 + MGP_WSBEiJ_P0078162 Hrh1 protein_coding protein_coding MGP_WSBEiJ_T0075931.1 MGP_WSBEiJ_G0029810.1 mouse_genomes_project 6 39584326 39602660 - MGP_WSBEiJ_P0075931 Kel protein_coding protein_coding MGP_WSBEiJ_T0075932.1 MGP_WSBEiJ_G0029810.1 mouse_genomes_project 6 39584331 39585997 - MGP_WSBEiJ_P0075932 Kel protein_coding protein_coding MGP_WSBEiJ_T0075933.1 MGP_WSBEiJ_G0029810.1 mouse_genomes_project 6 39584350 39585856 - Kel protein_coding processed_transcript MGP_WSBEiJ_T0075934.1 MGP_WSBEiJ_G0029810.1 mouse_genomes_project 6 39586023 39597481 - MGP_WSBEiJ_P0075934 Kel protein_coding protein_coding MGP_WSBEiJ_T0075935.1 MGP_WSBEiJ_G0029810.1 mouse_genomes_project 6 39586438 39586964 - Kel protein_coding retained_intron MGP_WSBEiJ_T0100134.1 MGP_WSBEiJ_G0038724.1 mouse_genomes_project 6 101456574 101458919 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100135.1 MGP_WSBEiJ_G0038724.1 mouse_genomes_project 6 101458790 101461004 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0077249.1 MGP_WSBEiJ_G0030134.1 mouse_genomes_project 6 86461800 86501741 - MGP_WSBEiJ_P0077249 Nat8f4 protein_coding protein_coding MGP_WSBEiJ_T0077250.1 MGP_WSBEiJ_G0030134.1 mouse_genomes_project 6 86461800 86501537 - MGP_WSBEiJ_P0077250 Nat8f4 protein_coding protein_coding MGP_WSBEiJ_T0099632.1 MGP_WSBEiJ_G0038295.1 mouse_genomes_project 6 9952096 9952225 + Gm24985 snoRNA snoRNA MGP_WSBEiJ_T0014799.1 MGP_WSBEiJ_G0012929.1 mouse_genomes_project 6 9373529 9375231 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075251.1 MGP_WSBEiJ_G0029660.1 mouse_genomes_project 6 20246356 20312759 - MGP_WSBEiJ_P0075251 Aass protein_coding protein_coding MGP_WSBEiJ_T0075252.1 MGP_WSBEiJ_G0029660.1 mouse_genomes_project 6 20267364 20306045 - Aass protein_coding processed_transcript MGP_WSBEiJ_T0075253.1 MGP_WSBEiJ_G0029660.1 mouse_genomes_project 6 20267364 20306077 - MGP_WSBEiJ_P0075253 Aass protein_coding protein_coding MGP_WSBEiJ_T0075254.1 MGP_WSBEiJ_G0029660.1 mouse_genomes_project 6 20287420 20312688 - Aass protein_coding processed_transcript MGP_WSBEiJ_T0078825.1 MGP_WSBEiJ_G0030439.1 mouse_genomes_project 6 126938997 126945024 - MGP_WSBEiJ_P0078825 Gnb3 protein_coding protein_coding MGP_WSBEiJ_T0078826.1 MGP_WSBEiJ_G0030439.1 mouse_genomes_project 6 126939004 126944706 - Gnb3 protein_coding retained_intron MGP_WSBEiJ_T0078827.1 MGP_WSBEiJ_G0030439.1 mouse_genomes_project 6 126939436 126941046 - Gnb3 protein_coding processed_transcript MGP_WSBEiJ_T0078828.1 MGP_WSBEiJ_G0030439.1 mouse_genomes_project 6 126943847 126944832 - Gnb3 protein_coding retained_intron MGP_WSBEiJ_T0099660.1 MGP_WSBEiJ_G0038323.1 mouse_genomes_project 6 71806815 71806952 - Gm22486 snoRNA snoRNA MGP_WSBEiJ_T0015108.1 MGP_WSBEiJ_G0013238.1 mouse_genomes_project 6 124153989 124154369 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000048.1 MGP_WSBEiJ_G0000039.1 mouse_genomes_project 6 70561523 70561561 + MGP_WSBEiJ_P0000048 Igkj4 IG_J_gene IG_J_gene MGP_WSBEiJ_T0015174.1 MGP_WSBEiJ_G0013304.1 mouse_genomes_project 6 142397429 142398033 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004893.1 MGP_WSBEiJ_G0004196.1 mouse_genomes_project 6 71441650 71442574 - 1700040L08Rik antisense antisense MGP_WSBEiJ_T0076480.1 MGP_WSBEiJ_G0029953.1 mouse_genomes_project 6 55386472 55392048 - MGP_WSBEiJ_P0076480 Lsm5 protein_coding protein_coding MGP_WSBEiJ_T0075591.1 MGP_WSBEiJ_G0029725.1 mouse_genomes_project 6 29609866 30064355 - MGP_WSBEiJ_P0075591 Plxna4 protein_coding protein_coding MGP_WSBEiJ_T0075592.1 MGP_WSBEiJ_G0029725.1 mouse_genomes_project 6 29691497 29692924 - Plxna4 protein_coding retained_intron MGP_WSBEiJ_T0078363.1 MGP_WSBEiJ_G0030349.1 mouse_genomes_project 6 119374132 119382355 + Zfp239 protein_coding processed_transcript MGP_WSBEiJ_T0078364.1 MGP_WSBEiJ_G0030349.1 mouse_genomes_project 6 119375109 119382316 + Zfp239 protein_coding processed_transcript MGP_WSBEiJ_T0078365.1 MGP_WSBEiJ_G0030349.1 mouse_genomes_project 6 119375109 119384878 + MGP_WSBEiJ_P0078365 Zfp239 protein_coding protein_coding MGP_WSBEiJ_T0078366.1 MGP_WSBEiJ_G0030349.1 mouse_genomes_project 6 119375109 119384352 + MGP_WSBEiJ_P0078366 Zfp239 protein_coding protein_coding MGP_WSBEiJ_T0078367.1 MGP_WSBEiJ_G0030349.1 mouse_genomes_project 6 119375116 119381496 + Zfp239 protein_coding retained_intron MGP_WSBEiJ_T0078368.1 MGP_WSBEiJ_G0030349.1 mouse_genomes_project 6 119375116 119382311 + Zfp239 protein_coding processed_transcript MGP_WSBEiJ_T0078369.1 MGP_WSBEiJ_G0030349.1 mouse_genomes_project 6 119375116 119382044 + Zfp239 protein_coding processed_transcript MGP_WSBEiJ_T0015063.1 MGP_WSBEiJ_G0013193.1 mouse_genomes_project 6 110662981 110663567 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015153.1 MGP_WSBEiJ_G0013283.1 mouse_genomes_project 6 135481622 135481857 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002038.1 MGP_WSBEiJ_G0001958.1 mouse_genomes_project 6 92038758 92041591 - TEC TEC MGP_WSBEiJ_T0015137.1 MGP_WSBEiJ_G0013267.1 mouse_genomes_project 6 131056835 131057325 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002623.1 MGP_WSBEiJ_G0002513.1 mouse_genomes_project 6 39018584 39019075 + MGP_WSBEiJ_P0002623 Trbv16 TR_V_gene TR_V_gene MGP_WSBEiJ_T0079499.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144035980 144219225 + MGP_WSBEiJ_P0079499 Plekha5 protein_coding protein_coding MGP_WSBEiJ_T0079500.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144036074 144209785 + MGP_WSBEiJ_P0079500 Plekha5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079501.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144036075 144207002 + MGP_WSBEiJ_P0079501 Plekha5 protein_coding protein_coding MGP_WSBEiJ_T0079502.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144045974 144168968 + MGP_WSBEiJ_P0079502 Plekha5 protein_coding protein_coding MGP_WSBEiJ_T0079503.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144132528 144168969 + MGP_WSBEiJ_P0079503 Plekha5 protein_coding protein_coding MGP_WSBEiJ_T0079504.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144141017 144207002 + MGP_WSBEiJ_P0079504 Plekha5 protein_coding protein_coding MGP_WSBEiJ_T0079505.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144151227 144219225 + Plekha5 protein_coding processed_transcript MGP_WSBEiJ_T0079506.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144159923 144219225 + MGP_WSBEiJ_P0079506 Plekha5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079507.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144159949 144173907 + Plekha5 protein_coding processed_transcript MGP_WSBEiJ_T0079508.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144159953 144219225 + MGP_WSBEiJ_P0079508 Plekha5 protein_coding protein_coding MGP_WSBEiJ_T0079509.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144160088 144219225 + MGP_WSBEiJ_P0079509 Plekha5 protein_coding protein_coding MGP_WSBEiJ_T0079510.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144184444 144219231 + MGP_WSBEiJ_P0079510 Plekha5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0079511.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144185276 144200419 + Plekha5 protein_coding retained_intron MGP_WSBEiJ_T0079512.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144197770 144200426 + Plekha5 protein_coding retained_intron MGP_WSBEiJ_T0079513.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144197958 144219225 + MGP_WSBEiJ_P0079513 Plekha5 protein_coding protein_coding MGP_WSBEiJ_T0079514.1 MGP_WSBEiJ_G0030613.1 mouse_genomes_project 6 144202505 144204674 + Plekha5 protein_coding retained_intron MGP_WSBEiJ_T0001884.1 MGP_WSBEiJ_G0001804.1 mouse_genomes_project 6 14693100 14696024 + TEC TEC MGP_WSBEiJ_T0008644.1 MGP_WSBEiJ_G0006987.1 mouse_genomes_project 6 152040866 152042073 - Gm17216 lincRNA lincRNA MGP_WSBEiJ_T0074984.1 MGP_WSBEiJ_G0029610.1 mouse_genomes_project 6 2255289 2268157 - MGP_WSBEiJ_P0074984 Pdk4 protein_coding protein_coding MGP_WSBEiJ_T0074985.1 MGP_WSBEiJ_G0029610.1 mouse_genomes_project 6 2263468 2268109 - MGP_WSBEiJ_P0074985 Pdk4 protein_coding protein_coding MGP_WSBEiJ_T0074986.1 MGP_WSBEiJ_G0029610.1 mouse_genomes_project 6 2266741 2268123 - Pdk4 protein_coding retained_intron MGP_WSBEiJ_T0100932.1 MGP_WSBEiJ_G0039390.1 mouse_genomes_project 6 131060464 131068880 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100933.1 MGP_WSBEiJ_G0039390.1 mouse_genomes_project 6 131060487 131064090 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0077387.1 MGP_WSBEiJ_G0030156.1 mouse_genomes_project 6 87798750 87806797 + MGP_WSBEiJ_P0077387 D6Ertd527e protein_coding protein_coding MGP_WSBEiJ_T0077388.1 MGP_WSBEiJ_G0030156.1 mouse_genomes_project 6 87798752 87806854 + MGP_WSBEiJ_P0077388 D6Ertd527e protein_coding protein_coding MGP_WSBEiJ_T0077389.1 MGP_WSBEiJ_G0030156.1 mouse_genomes_project 6 87798752 87806853 + MGP_WSBEiJ_P0077389 D6Ertd527e protein_coding protein_coding MGP_WSBEiJ_T0077390.1 MGP_WSBEiJ_G0030156.1 mouse_genomes_project 6 87798786 87805264 + D6Ertd527e protein_coding processed_transcript MGP_WSBEiJ_T0077391.1 MGP_WSBEiJ_G0030156.1 mouse_genomes_project 6 87798817 87805256 + D6Ertd527e protein_coding processed_transcript MGP_WSBEiJ_T0097223.1 MGP_WSBEiJ_G0035904.1 mouse_genomes_project 6 142759611 142759778 - Gm25434 scaRNA scaRNA MGP_WSBEiJ_T0014851.1 MGP_WSBEiJ_G0012981.1 mouse_genomes_project 6 38871718 38871906 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100297.1 MGP_WSBEiJ_G0038800.1 mouse_genomes_project 6 56457471 56457688 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0078852.1 MGP_WSBEiJ_G0030445.1 mouse_genomes_project 6 127046570 127052408 + Mlf2 protein_coding retained_intron MGP_WSBEiJ_T0078853.1 MGP_WSBEiJ_G0030445.1 mouse_genomes_project 6 127046589 127049555 + Mlf2 protein_coding retained_intron MGP_WSBEiJ_T0078854.1 MGP_WSBEiJ_G0030445.1 mouse_genomes_project 6 127046589 127047873 + Mlf2 protein_coding retained_intron MGP_WSBEiJ_T0078855.1 MGP_WSBEiJ_G0030445.1 mouse_genomes_project 6 127046609 127049549 + MGP_WSBEiJ_P0078855 Mlf2 protein_coding protein_coding MGP_WSBEiJ_T0078856.1 MGP_WSBEiJ_G0030445.1 mouse_genomes_project 6 127046616 127051315 + MGP_WSBEiJ_P0078856 Mlf2 protein_coding protein_coding MGP_WSBEiJ_T0078857.1 MGP_WSBEiJ_G0030445.1 mouse_genomes_project 6 127046660 127051314 + MGP_WSBEiJ_P0078857 Mlf2 protein_coding protein_coding MGP_WSBEiJ_T0078858.1 MGP_WSBEiJ_G0030445.1 mouse_genomes_project 6 127047094 127049541 + MGP_WSBEiJ_P0078858 Mlf2 protein_coding protein_coding MGP_WSBEiJ_T0078859.1 MGP_WSBEiJ_G0030445.1 mouse_genomes_project 6 127047808 127050463 + Mlf2 protein_coding retained_intron MGP_WSBEiJ_T0008606.1 MGP_WSBEiJ_G0006962.1 mouse_genomes_project 6 137855173 137857617 - Gm43949 lincRNA lincRNA MGP_WSBEiJ_T0075816.1 MGP_WSBEiJ_G0029767.1 mouse_genomes_project 6 36829212 36862283 - MGP_WSBEiJ_P0075816 Parp12 protein_coding protein_coding MGP_WSBEiJ_T0075817.1 MGP_WSBEiJ_G0029767.1 mouse_genomes_project 6 36831810 36833889 - Parp12 protein_coding retained_intron MGP_WSBEiJ_T0014912.1 MGP_WSBEiJ_G0013042.1 mouse_genomes_project 6 59285104 59287025 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099643.1 MGP_WSBEiJ_G0038306.1 mouse_genomes_project 6 40232965 40233043 + Gm25108 snoRNA snoRNA MGP_WSBEiJ_T0008575.1 MGP_WSBEiJ_G0006936.1 mouse_genomes_project 6 119094926 119127183 - Gm45083 lincRNA lincRNA MGP_WSBEiJ_T0100900.1 MGP_WSBEiJ_G0039358.1 mouse_genomes_project 6 56032072 56032430 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001937.1 MGP_WSBEiJ_G0001857.1 mouse_genomes_project 6 44508909 44511439 + TEC TEC MGP_WSBEiJ_T0015075.1 MGP_WSBEiJ_G0013205.1 mouse_genomes_project 6 114900480 114900889 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004831.1 MGP_WSBEiJ_G0004146.1 mouse_genomes_project 6 14813993 14814594 - Gm26738 antisense antisense MGP_WSBEiJ_T0075726.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34453364 34790904 - MGP_WSBEiJ_P0075726 Dgki protein_coding unknown_likely_coding MGP_WSBEiJ_T0075727.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34457339 34934133 - MGP_WSBEiJ_P0075727 Dgki protein_coding protein_coding MGP_WSBEiJ_T0075728.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34458298 34934343 - MGP_WSBEiJ_P0075728 Dgki protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075729.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34458298 34934343 - MGP_WSBEiJ_P0075729 Dgki protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075730.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34458298 34934343 - MGP_WSBEiJ_P0075730 Dgki protein_coding protein_coding MGP_WSBEiJ_T0075731.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34458473 34933796 - MGP_WSBEiJ_P0075731 Dgki protein_coding protein_coding MGP_WSBEiJ_T0075732.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34527822 34652332 - Dgki protein_coding processed_transcript MGP_WSBEiJ_T0075733.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34655911 34687091 - Dgki protein_coding processed_transcript MGP_WSBEiJ_T0075734.1 MGP_WSBEiJ_G0029749.1 mouse_genomes_project 6 34859019 34933903 - Dgki protein_coding processed_transcript MGP_WSBEiJ_T0076623.1 MGP_WSBEiJ_G0030002.1 mouse_genomes_project 6 64420975 64448665 - MGP_WSBEiJ_P0076623 Hpgds protein_coding protein_coding MGP_WSBEiJ_T0076624.1 MGP_WSBEiJ_G0030002.1 mouse_genomes_project 6 64422718 64426605 - Hpgds protein_coding retained_intron MGP_WSBEiJ_T0076625.1 MGP_WSBEiJ_G0030002.1 mouse_genomes_project 6 64435684 64441944 - Hpgds protein_coding retained_intron MGP_WSBEiJ_T0014901.1 MGP_WSBEiJ_G0013031.1 mouse_genomes_project 6 56387721 56387974 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014956.1 MGP_WSBEiJ_G0013086.1 mouse_genomes_project 6 67126343 67128965 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076174.1 MGP_WSBEiJ_G0029883.1 mouse_genomes_project 6 46977866 47012893 + MGP_WSBEiJ_P0076174 Gm28053 protein_coding protein_coding MGP_WSBEiJ_T0076176.1 MGP_WSBEiJ_G0029883.1 mouse_genomes_project 6 46977913 46988979 + Gm28053 protein_coding retained_intron MGP_WSBEiJ_T0076180.1 MGP_WSBEiJ_G0029883.1 mouse_genomes_project 6 46998255 47012937 + MGP_WSBEiJ_P0076180 Gm28053 protein_coding protein_coding MGP_WSBEiJ_T0075908.1 MGP_WSBEiJ_G0029794.1 mouse_genomes_project 6 38807193 38810691 - MGP_WSBEiJ_P0075908 Gm4744 protein_coding protein_coding MGP_WSBEiJ_T0000191.1 MGP_WSBEiJ_G0000143.1 mouse_genomes_project 6 69777850 69778417 - MGP_WSBEiJ_P0000191 Igkv8-34 IG_V_gene IG_V_gene MGP_WSBEiJ_T0002022.1 MGP_WSBEiJ_G0001942.1 mouse_genomes_project 6 88560038 88561122 + TEC TEC MGP_WSBEiJ_T0078273.1 MGP_WSBEiJ_G0030332.1 mouse_genomes_project 6 117393991 117437648 - MGP_WSBEiJ_P0078273 Plxnd1 protein_coding protein_coding MGP_WSBEiJ_T0078274.1 MGP_WSBEiJ_G0030332.1 mouse_genomes_project 6 117394822 117396027 - Plxnd1 protein_coding retained_intron MGP_WSBEiJ_T0078275.1 MGP_WSBEiJ_G0030332.1 mouse_genomes_project 6 117394988 117395553 - Plxnd1 protein_coding retained_intron MGP_WSBEiJ_T0078276.1 MGP_WSBEiJ_G0030332.1 mouse_genomes_project 6 117397750 117399215 - Plxnd1 protein_coding retained_intron MGP_WSBEiJ_T0078277.1 MGP_WSBEiJ_G0030332.1 mouse_genomes_project 6 117406149 117408616 - MGP_WSBEiJ_P0078277 Plxnd1 protein_coding protein_coding MGP_WSBEiJ_T0078278.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117466399 117589727 - MGP_WSBEiJ_P0078278 Tmcc1 protein_coding protein_coding MGP_WSBEiJ_T0078279.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117468953 117560314 - MGP_WSBEiJ_P0078279 Tmcc1 protein_coding protein_coding MGP_WSBEiJ_T0078280.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117469123 117589717 - MGP_WSBEiJ_P0078280 Tmcc1 protein_coding protein_coding MGP_WSBEiJ_T0078281.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117469397 117589827 - MGP_WSBEiJ_P0078281 Tmcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078282.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117469775 117525780 - MGP_WSBEiJ_P0078282 Tmcc1 protein_coding protein_coding MGP_WSBEiJ_T0078283.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117491938 117589300 - MGP_WSBEiJ_P0078283 Tmcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078284.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117503210 117509634 - Tmcc1 protein_coding retained_intron MGP_WSBEiJ_T0078285.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117557366 117562859 - Tmcc1 protein_coding retained_intron MGP_WSBEiJ_T0078286.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117587027 117631530 - MGP_WSBEiJ_P0078286 Tmcc1 protein_coding protein_coding MGP_WSBEiJ_T0078287.1 MGP_WSBEiJ_G0030333.1 mouse_genomes_project 6 117588916 117590515 - Tmcc1 protein_coding retained_intron MGP_WSBEiJ_T0008477.1 MGP_WSBEiJ_G0006857.1 mouse_genomes_project 6 54034501 54051308 + 6430584L05Rik lincRNA lincRNA MGP_WSBEiJ_T0002010.1 MGP_WSBEiJ_G0001930.1 mouse_genomes_project 6 87536314 87537887 + TEC TEC MGP_WSBEiJ_T0100955.1 MGP_WSBEiJ_G0039412.1 mouse_genomes_project 6 136840334 136842296 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079028.1 MGP_WSBEiJ_G0030479.1 mouse_genomes_project 6 129311046 129319507 + MGP_WSBEiJ_P0079028 Fgf23 protein_coding protein_coding MGP_WSBEiJ_T0079555.1 MGP_WSBEiJ_G0030625.1 mouse_genomes_project 6 145964941 145970461 + MGP_WSBEiJ_P0079555 Iapp protein_coding protein_coding MGP_WSBEiJ_T0079556.1 MGP_WSBEiJ_G0030625.1 mouse_genomes_project 6 145964965 145965582 + Iapp protein_coding processed_transcript MGP_WSBEiJ_T0076128.1 MGP_WSBEiJ_G0029870.1 mouse_genomes_project 6 46786683 46790915 + MGP_WSBEiJ_P0076128 Atp6v0e2 protein_coding protein_coding MGP_WSBEiJ_T0076129.1 MGP_WSBEiJ_G0029870.1 mouse_genomes_project 6 46786706 46788941 + Atp6v0e2 protein_coding retained_intron MGP_WSBEiJ_T0076130.1 MGP_WSBEiJ_G0029870.1 mouse_genomes_project 6 46786733 46790915 + MGP_WSBEiJ_P0076130 Atp6v0e2 protein_coding protein_coding MGP_WSBEiJ_T0076243.1 MGP_WSBEiJ_G0029900.1 mouse_genomes_project 6 47696612 47777400 + MGP_WSBEiJ_P0076243 protein_coding protein_coding MGP_WSBEiJ_T0076244.1 MGP_WSBEiJ_G0029900.1 mouse_genomes_project 6 47696612 47777400 + MGP_WSBEiJ_P0076244 protein_coding protein_coding MGP_WSBEiJ_T0076245.1 MGP_WSBEiJ_G0029900.1 mouse_genomes_project 6 47699903 47777550 + MGP_WSBEiJ_P0076245 protein_coding unknown_likely_coding MGP_WSBEiJ_T0076246.1 MGP_WSBEiJ_G0029900.1 mouse_genomes_project 6 47743472 47777548 + MGP_WSBEiJ_P0076246 protein_coding protein_coding MGP_WSBEiJ_T0015053.1 MGP_WSBEiJ_G0013183.1 mouse_genomes_project 6 105314799 105315179 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001931.1 MGP_WSBEiJ_G0001851.1 mouse_genomes_project 6 44108865 44110820 + TEC TEC MGP_WSBEiJ_T0014813.1 MGP_WSBEiJ_G0012943.1 mouse_genomes_project 6 15290240 15291201 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077660.1 MGP_WSBEiJ_G0030216.1 mouse_genomes_project 6 92203688 92252822 - MGP_WSBEiJ_P0077660 Wnt7a protein_coding protein_coding MGP_WSBEiJ_T0077661.1 MGP_WSBEiJ_G0030216.1 mouse_genomes_project 6 92203690 92204805 - Wnt7a protein_coding processed_transcript MGP_WSBEiJ_T0077662.1 MGP_WSBEiJ_G0030216.1 mouse_genomes_project 6 92203692 92204779 - Wnt7a protein_coding processed_transcript MGP_WSBEiJ_T0017681.1 MGP_WSBEiJ_G0015056.1 mouse_genomes_project 6 59369927 59371214 - processed_transcript lincRNA MGP_WSBEiJ_T0076311.1 MGP_WSBEiJ_G0029912.1 mouse_genomes_project 6 50637396 50640124 - MGP_WSBEiJ_P0076311 Hoxa1 protein_coding protein_coding MGP_WSBEiJ_T0076312.1 MGP_WSBEiJ_G0029912.1 mouse_genomes_project 6 50637401 50640124 - MGP_WSBEiJ_P0076312 Hoxa1 protein_coding protein_coding MGP_WSBEiJ_T0079119.1 MGP_WSBEiJ_G0030499.1 mouse_genomes_project 6 131010347 131277423 - MGP_WSBEiJ_P0079119 protein_coding protein_coding MGP_WSBEiJ_T0079128.1 MGP_WSBEiJ_G0030499.1 mouse_genomes_project 6 131204152 131277360 - MGP_WSBEiJ_P0079128 protein_coding protein_coding MGP_WSBEiJ_T0000196.1 MGP_WSBEiJ_G0000147.1 mouse_genomes_project 6 69888195 69888848 - MGP_WSBEiJ_P0000196 Igkv6-29 IG_V_gene IG_V_gene MGP_WSBEiJ_T0078180.1 MGP_WSBEiJ_G0030314.1 mouse_genomes_project 6 116237136 116251571 - Vgll4 protein_coding processed_transcript MGP_WSBEiJ_T0078181.1 MGP_WSBEiJ_G0030314.1 mouse_genomes_project 6 116237932 116298754 - MGP_WSBEiJ_P0078181 Vgll4 protein_coding protein_coding MGP_WSBEiJ_T0078182.1 MGP_WSBEiJ_G0030314.1 mouse_genomes_project 6 116238699 116251484 - Vgll4 protein_coding processed_transcript MGP_WSBEiJ_T0078183.1 MGP_WSBEiJ_G0030314.1 mouse_genomes_project 6 116238699 116241266 - Vgll4 protein_coding processed_transcript MGP_WSBEiJ_T0078184.1 MGP_WSBEiJ_G0030314.1 mouse_genomes_project 6 116238829 116348867 - MGP_WSBEiJ_P0078184 Vgll4 protein_coding protein_coding MGP_WSBEiJ_T0078185.1 MGP_WSBEiJ_G0030314.1 mouse_genomes_project 6 116239272 116349681 - MGP_WSBEiJ_P0078185 Vgll4 protein_coding protein_coding MGP_WSBEiJ_T0078186.1 MGP_WSBEiJ_G0030314.1 mouse_genomes_project 6 116296986 116298749 - Vgll4 protein_coding retained_intron MGP_WSBEiJ_T0001987.1 MGP_WSBEiJ_G0001907.1 mouse_genomes_project 6 78205457 78207510 + TEC TEC MGP_WSBEiJ_T0078150.1 MGP_WSBEiJ_G0030310.1 mouse_genomes_project 6 115626596 115750579 + MGP_WSBEiJ_P0078150 Slc6a11 protein_coding protein_coding MGP_WSBEiJ_T0078151.1 MGP_WSBEiJ_G0030310.1 mouse_genomes_project 6 115626774 115627791 + Slc6a11 protein_coding retained_intron MGP_WSBEiJ_T0076192.1 MGP_WSBEiJ_G0029888.1 mouse_genomes_project 6 47096154 47102596 - MGP_WSBEiJ_P0076192 Tmem176b protein_coding protein_coding MGP_WSBEiJ_T0076193.1 MGP_WSBEiJ_G0029888.1 mouse_genomes_project 6 47096723 47102872 - MGP_WSBEiJ_P0076193 Tmem176b protein_coding protein_coding MGP_WSBEiJ_T0076194.1 MGP_WSBEiJ_G0029888.1 mouse_genomes_project 6 47097556 47103189 - MGP_WSBEiJ_P0076194 Tmem176b protein_coding protein_coding MGP_WSBEiJ_T0076195.1 MGP_WSBEiJ_G0029888.1 mouse_genomes_project 6 47097556 47103607 - MGP_WSBEiJ_P0076195 Tmem176b protein_coding protein_coding MGP_WSBEiJ_T0076196.1 MGP_WSBEiJ_G0029888.1 mouse_genomes_project 6 47097558 47102859 - MGP_WSBEiJ_P0076196 Tmem176b protein_coding protein_coding MGP_WSBEiJ_T0076197.1 MGP_WSBEiJ_G0029888.1 mouse_genomes_project 6 47097625 47102706 - MGP_WSBEiJ_P0076197 Tmem176b protein_coding protein_coding MGP_WSBEiJ_T0076198.1 MGP_WSBEiJ_G0029888.1 mouse_genomes_project 6 47097910 47102566 - Tmem176b protein_coding retained_intron MGP_WSBEiJ_T0005027.1 MGP_WSBEiJ_G0004288.1 mouse_genomes_project 6 138586440 138643767 + Gm44276 antisense antisense MGP_WSBEiJ_T0100138.1 MGP_WSBEiJ_G0038726.1 mouse_genomes_project 6 130520771 130557550 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0004894.1 MGP_WSBEiJ_G0004197.1 mouse_genomes_project 6 71881246 71884076 - Gm26628 antisense antisense MGP_WSBEiJ_T0001870.1 MGP_WSBEiJ_G0001790.1 mouse_genomes_project 6 1505239 1507276 + TEC TEC MGP_WSBEiJ_T0014883.1 MGP_WSBEiJ_G0013013.1 mouse_genomes_project 6 47449270 47449472 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008569.1 MGP_WSBEiJ_G0006932.1 mouse_genomes_project 6 118667710 118669746 + D030044L04Rik lincRNA lincRNA MGP_WSBEiJ_T0099663.1 MGP_WSBEiJ_G0038326.1 mouse_genomes_project 6 82157865 82157983 + Gm22530 snoRNA snoRNA MGP_WSBEiJ_T0075537.1 MGP_WSBEiJ_G0029716.1 mouse_genomes_project 6 28066863 28073018 + MGP_WSBEiJ_P0075537 Cpa1 protein_coding protein_coding MGP_WSBEiJ_T0075538.1 MGP_WSBEiJ_G0029716.1 mouse_genomes_project 6 28067985 28069537 + Cpa1 protein_coding retained_intron MGP_WSBEiJ_T0015037.1 MGP_WSBEiJ_G0013167.1 mouse_genomes_project 6 100003419 100003895 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079240.1 MGP_WSBEiJ_G0030544.1 mouse_genomes_project 6 135764895 135767244 - A630073D07Rik protein_coding processed_transcript MGP_WSBEiJ_T0079241.1 MGP_WSBEiJ_G0030544.1 mouse_genomes_project 6 135764895 135767296 - MGP_WSBEiJ_P0079241 A630073D07Rik protein_coding protein_coding MGP_WSBEiJ_T0079242.1 MGP_WSBEiJ_G0030544.1 mouse_genomes_project 6 135764899 135788321 - A630073D07Rik protein_coding processed_transcript MGP_WSBEiJ_T0078925.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127300613 127301830 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078926.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127300613 127326638 - MGP_WSBEiJ_P0078926 Ncapd2 protein_coding protein_coding MGP_WSBEiJ_T0078927.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127302384 127303650 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078928.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127303500 127304366 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078929.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127303611 127306476 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078930.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127304391 127306458 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078931.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127305922 127307096 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078932.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127306017 127310365 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078933.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127308398 127311017 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078934.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127310840 127313075 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078935.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127318440 127326540 - MGP_WSBEiJ_P0078935 Ncapd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078936.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127318664 127320740 - Ncapd2 protein_coding retained_intron MGP_WSBEiJ_T0078937.1 MGP_WSBEiJ_G0030456.1 mouse_genomes_project 6 127319937 127326427 - MGP_WSBEiJ_P0078937 Ncapd2 protein_coding protein_coding MGP_WSBEiJ_T0001913.1 MGP_WSBEiJ_G0001833.1 mouse_genomes_project 6 37920927 37924320 + TEC TEC MGP_WSBEiJ_T0079183.1 MGP_WSBEiJ_G0030520.1 mouse_genomes_project 6 132148576 132156583 + MGP_WSBEiJ_P0079183 Klre1 protein_coding protein_coding MGP_WSBEiJ_T0079184.1 MGP_WSBEiJ_G0030520.1 mouse_genomes_project 6 132148922 132156533 + MGP_WSBEiJ_P0079184 Klre1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079185.1 MGP_WSBEiJ_G0030520.1 mouse_genomes_project 6 132154073 132156580 + Klre1 protein_coding retained_intron MGP_WSBEiJ_T0008564.1 MGP_WSBEiJ_G0006927.1 mouse_genomes_project 6 114122253 114129996 + Gm26799 lincRNA lincRNA MGP_WSBEiJ_T0010638.1 MGP_WSBEiJ_G0008795.1 mouse_genomes_project 6 130398501 130398611 - Gm26338 miRNA miRNA MGP_WSBEiJ_T0015170.1 MGP_WSBEiJ_G0013300.1 mouse_genomes_project 6 139730832 139732018 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077917.1 MGP_WSBEiJ_G0030269.1 mouse_genomes_project 6 109489224 109502671 + MGP_WSBEiJ_P0077917 Setmar protein_coding protein_coding MGP_WSBEiJ_T0077918.1 MGP_WSBEiJ_G0030269.1 mouse_genomes_project 6 109489241 109502671 + MGP_WSBEiJ_P0077918 Setmar protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002092.1 MGP_WSBEiJ_G0002011.1 mouse_genomes_project 6 122898878 122900389 - TEC TEC MGP_WSBEiJ_T0075739.1 MGP_WSBEiJ_G0029752.1 mouse_genomes_project 6 35544411 35598811 + Trim24 protein_coding retained_intron MGP_WSBEiJ_T0075740.1 MGP_WSBEiJ_G0029752.1 mouse_genomes_project 6 35544411 35625061 + Trim24 protein_coding retained_intron MGP_WSBEiJ_T0075741.1 MGP_WSBEiJ_G0029752.1 mouse_genomes_project 6 35544411 35645590 + MGP_WSBEiJ_P0075741 Trim24 protein_coding protein_coding MGP_WSBEiJ_T0075742.1 MGP_WSBEiJ_G0029752.1 mouse_genomes_project 6 35544411 35645590 + MGP_WSBEiJ_P0075742 Trim24 protein_coding protein_coding MGP_WSBEiJ_T0075743.1 MGP_WSBEiJ_G0029752.1 mouse_genomes_project 6 35549930 35609483 + Trim24 protein_coding processed_transcript MGP_WSBEiJ_T0075744.1 MGP_WSBEiJ_G0029752.1 mouse_genomes_project 6 35577082 35645226 + MGP_WSBEiJ_P0075744 Trim24 protein_coding protein_coding MGP_WSBEiJ_T0075745.1 MGP_WSBEiJ_G0029752.1 mouse_genomes_project 6 35592681 35605212 + Trim24 protein_coding retained_intron MGP_WSBEiJ_T0075746.1 MGP_WSBEiJ_G0029752.1 mouse_genomes_project 6 35626822 35632921 + Trim24 protein_coding retained_intron MGP_WSBEiJ_T0015144.1 MGP_WSBEiJ_G0013274.1 mouse_genomes_project 6 134069175 134070200 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008392.1 MGP_WSBEiJ_G0006801.1 mouse_genomes_project 6 26292336 26343736 + Gm3294 lincRNA lincRNA MGP_WSBEiJ_T0014986.1 MGP_WSBEiJ_G0013116.1 mouse_genomes_project 6 78288532 78289730 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076908.1 MGP_WSBEiJ_G0030063.1 mouse_genomes_project 6 78607116 78610108 - MGP_WSBEiJ_P0076908 Reg3d protein_coding protein_coding MGP_WSBEiJ_T0076909.1 MGP_WSBEiJ_G0030063.1 mouse_genomes_project 6 78607116 78610108 - MGP_WSBEiJ_P0076909 Reg3d protein_coding protein_coding MGP_WSBEiJ_T0076910.1 MGP_WSBEiJ_G0030063.1 mouse_genomes_project 6 78607166 78609756 - MGP_WSBEiJ_P0076910 Reg3d protein_coding protein_coding MGP_WSBEiJ_T0004885.1 MGP_WSBEiJ_G0004188.1 mouse_genomes_project 6 53285584 53286572 - Gm28402 antisense antisense MGP_WSBEiJ_T0078261.1 MGP_WSBEiJ_G0030330.1 mouse_genomes_project 6 117369836 117378125 + MGP_WSBEiJ_P0078261 Rho protein_coding protein_coding MGP_WSBEiJ_T0078262.1 MGP_WSBEiJ_G0030330.1 mouse_genomes_project 6 117370013 117372187 + Rho protein_coding retained_intron MGP_WSBEiJ_T0078263.1 MGP_WSBEiJ_G0030330.1 mouse_genomes_project 6 117370644 117374796 + MGP_WSBEiJ_P0078263 Rho protein_coding protein_coding MGP_WSBEiJ_T0078264.1 MGP_WSBEiJ_G0030330.1 mouse_genomes_project 6 117372429 117375041 + MGP_WSBEiJ_P0078264 Rho protein_coding protein_coding MGP_WSBEiJ_T0078265.1 MGP_WSBEiJ_G0030330.1 mouse_genomes_project 6 117372460 117375161 + MGP_WSBEiJ_P0078265 Rho protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078266.1 MGP_WSBEiJ_G0030330.1 mouse_genomes_project 6 117372826 117374133 + Rho protein_coding retained_intron MGP_WSBEiJ_T0078267.1 MGP_WSBEiJ_G0030330.1 mouse_genomes_project 6 117373285 117374317 + Rho protein_coding retained_intron MGP_WSBEiJ_T0002039.1 MGP_WSBEiJ_G0001959.1 mouse_genomes_project 6 92252971 92254174 + TEC TEC MGP_WSBEiJ_T0011442.1 MGP_WSBEiJ_G0009599.1 mouse_genomes_project 6 50642855 50643069 + Gm27861 misc_RNA misc_RNA MGP_WSBEiJ_T0008456.1 MGP_WSBEiJ_G0006842.1 mouse_genomes_project 6 49168618 49172568 - Gm44109 lincRNA lincRNA MGP_WSBEiJ_T0002016.1 MGP_WSBEiJ_G0001936.1 mouse_genomes_project 6 88008852 88009634 - TEC TEC MGP_WSBEiJ_T0001936.1 MGP_WSBEiJ_G0001856.1 mouse_genomes_project 6 44208994 44213356 + TEC TEC MGP_WSBEiJ_T0076651.1 MGP_WSBEiJ_G0030011.1 mouse_genomes_project 6 66146676 66147893 - MGP_WSBEiJ_P0076651 protein_coding protein_coding MGP_WSBEiJ_T0014834.1 MGP_WSBEiJ_G0012964.1 mouse_genomes_project 6 27343780 27343987 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014782.1 MGP_WSBEiJ_G0012912.1 mouse_genomes_project 6 3132202 3132427 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097083.1 MGP_WSBEiJ_G0035764.1 mouse_genomes_project 6 87968583 87968695 + n-R5s164 rRNA rRNA MGP_WSBEiJ_T0002044.1 MGP_WSBEiJ_G0001964.1 mouse_genomes_project 6 92750256 92751307 - TEC TEC MGP_WSBEiJ_T0079290.1 MGP_WSBEiJ_G0030571.1 mouse_genomes_project 6 137967224 138045402 - MGP_WSBEiJ_P0079290 Dusp16 protein_coding protein_coding MGP_WSBEiJ_T0079291.1 MGP_WSBEiJ_G0030571.1 mouse_genomes_project 6 137967229 138045552 - MGP_WSBEiJ_P0079291 Dusp16 protein_coding protein_coding MGP_WSBEiJ_T0079292.1 MGP_WSBEiJ_G0030571.1 mouse_genomes_project 6 137969589 138013184 - MGP_WSBEiJ_P0079292 Dusp16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079293.1 MGP_WSBEiJ_G0030571.1 mouse_genomes_project 6 137970544 137977777 - Dusp16 protein_coding retained_intron MGP_WSBEiJ_T0079294.1 MGP_WSBEiJ_G0030571.1 mouse_genomes_project 6 137970696 137996100 - Dusp16 protein_coding processed_transcript MGP_WSBEiJ_T0079295.1 MGP_WSBEiJ_G0030571.1 mouse_genomes_project 6 137972351 138010954 - MGP_WSBEiJ_P0079295 Dusp16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079296.1 MGP_WSBEiJ_G0030571.1 mouse_genomes_project 6 137988923 138044242 - MGP_WSBEiJ_P0079296 Dusp16 protein_coding protein_coding MGP_WSBEiJ_T0100937.1 MGP_WSBEiJ_G0039394.1 mouse_genomes_project 6 133140738 133150345 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014776.1 MGP_WSBEiJ_G0012906.1 mouse_genomes_project 6 971305 971401 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004841.1 MGP_WSBEiJ_G0004155.1 mouse_genomes_project 6 28166814 28167711 - Gm44296 antisense antisense MGP_WSBEiJ_T0008514.1 MGP_WSBEiJ_G0006888.1 mouse_genomes_project 6 84884817 84895692 - Gm10445 lincRNA lincRNA MGP_WSBEiJ_T0001903.1 MGP_WSBEiJ_G0001823.1 mouse_genomes_project 6 28532882 28534955 - TEC TEC MGP_WSBEiJ_T0008424.1 MGP_WSBEiJ_G0006823.1 mouse_genomes_project 6 32079918 32088291 + Gm13860 lincRNA lincRNA MGP_WSBEiJ_T0077247.1 MGP_WSBEiJ_G0030132.1 mouse_genomes_project 6 86414954 86416649 - MGP_WSBEiJ_P0077247 Nat8 protein_coding protein_coding MGP_WSBEiJ_T0008429.1 MGP_WSBEiJ_G0006826.1 mouse_genomes_project 6 32933859 32939827 + 1700065J11Rik lincRNA lincRNA MGP_WSBEiJ_T0079272.1 MGP_WSBEiJ_G0030567.1 mouse_genomes_project 6 137635359 137678424 + MGP_WSBEiJ_P0079272 Bcl2l14 protein_coding protein_coding MGP_WSBEiJ_T0079273.1 MGP_WSBEiJ_G0030567.1 mouse_genomes_project 6 137635386 137642382 + Bcl2l14 protein_coding processed_transcript MGP_WSBEiJ_T0079274.1 MGP_WSBEiJ_G0030567.1 mouse_genomes_project 6 137637694 137678412 + MGP_WSBEiJ_P0079274 Bcl2l14 protein_coding protein_coding MGP_WSBEiJ_T0079275.1 MGP_WSBEiJ_G0030567.1 mouse_genomes_project 6 137637706 137662922 + MGP_WSBEiJ_P0079275 Bcl2l14 protein_coding protein_coding MGP_WSBEiJ_T0079276.1 MGP_WSBEiJ_G0030567.1 mouse_genomes_project 6 137653462 137677803 + MGP_WSBEiJ_P0079276 Bcl2l14 protein_coding protein_coding MGP_WSBEiJ_T0079277.1 MGP_WSBEiJ_G0030567.1 mouse_genomes_project 6 137653499 137667409 + Bcl2l14 protein_coding retained_intron MGP_WSBEiJ_T0015095.1 MGP_WSBEiJ_G0013225.1 mouse_genomes_project 6 121632212 121632500 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075352.1 MGP_WSBEiJ_G0029687.1 mouse_genomes_project 6 26377037 26390674 + MGP_WSBEiJ_P0075352 Lep protein_coding protein_coding MGP_WSBEiJ_T0075353.1 MGP_WSBEiJ_G0029687.1 mouse_genomes_project 6 26382275 26387786 + MGP_WSBEiJ_P0075353 Lep protein_coding protein_coding MGP_WSBEiJ_T0077248.1 MGP_WSBEiJ_G0030133.1 mouse_genomes_project 6 86461799 86471765 - MGP_WSBEiJ_P0077248 Nat8f2 protein_coding protein_coding MGP_WSBEiJ_T0100895.1 MGP_WSBEiJ_G0039353.1 mouse_genomes_project 6 40909844 40910158 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079582.1 MGP_WSBEiJ_G0030631.1 mouse_genomes_project 6 146153645 146164693 - MGP_WSBEiJ_P0079582 Ldhb protein_coding protein_coding MGP_WSBEiJ_T0079583.1 MGP_WSBEiJ_G0030631.1 mouse_genomes_project 6 146153746 146173622 - MGP_WSBEiJ_P0079583 Ldhb protein_coding protein_coding MGP_WSBEiJ_T0079584.1 MGP_WSBEiJ_G0030631.1 mouse_genomes_project 6 146158866 146173426 - MGP_WSBEiJ_P0079584 Ldhb protein_coding protein_coding MGP_WSBEiJ_T0077796.1 MGP_WSBEiJ_G0030246.1 mouse_genomes_project 6 98254848 98277470 + MGP_WSBEiJ_P0077796 Arl6ip5 protein_coding protein_coding MGP_WSBEiJ_T0004955.1 MGP_WSBEiJ_G0004233.1 mouse_genomes_project 6 91988650 91989194 - Gm14573 antisense antisense MGP_WSBEiJ_T0015159.1 MGP_WSBEiJ_G0013289.1 mouse_genomes_project 6 135901974 135902245 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098442.1 MGP_WSBEiJ_G0037105.1 mouse_genomes_project 6 114502790 114502896 + Gm22591 snRNA snRNA MGP_WSBEiJ_T0079267.1 MGP_WSBEiJ_G0030566.1 mouse_genomes_project 6 137248451 137502645 + MGP_WSBEiJ_P0079267 Etv6 protein_coding protein_coding MGP_WSBEiJ_T0079268.1 MGP_WSBEiJ_G0030566.1 mouse_genomes_project 6 137248719 137480884 + MGP_WSBEiJ_P0079268 Etv6 protein_coding protein_coding MGP_WSBEiJ_T0079269.1 MGP_WSBEiJ_G0030566.1 mouse_genomes_project 6 137367074 137502652 + MGP_WSBEiJ_P0079269 Etv6 protein_coding protein_coding MGP_WSBEiJ_T0079270.1 MGP_WSBEiJ_G0030566.1 mouse_genomes_project 6 137466194 137494511 + Etv6 protein_coding retained_intron MGP_WSBEiJ_T0079271.1 MGP_WSBEiJ_G0030566.1 mouse_genomes_project 6 137480164 137481157 + Etv6 protein_coding processed_transcript MGP_WSBEiJ_T0079372.1 MGP_WSBEiJ_G0030587.1 mouse_genomes_project 6 139974230 140023951 - MGP_WSBEiJ_P0079372 Plbd1 protein_coding protein_coding MGP_WSBEiJ_T0079373.1 MGP_WSBEiJ_G0030587.1 mouse_genomes_project 6 139975468 140023896 - Plbd1 protein_coding retained_intron MGP_WSBEiJ_T0079374.1 MGP_WSBEiJ_G0030587.1 mouse_genomes_project 6 139976041 139996656 - Plbd1 protein_coding retained_intron MGP_WSBEiJ_T0079375.1 MGP_WSBEiJ_G0030587.1 mouse_genomes_project 6 140002307 140023586 - MGP_WSBEiJ_P0079375 Plbd1 protein_coding protein_coding MGP_WSBEiJ_T0014809.1 MGP_WSBEiJ_G0012939.1 mouse_genomes_project 6 13166202 13166814 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008374.1 MGP_WSBEiJ_G0006789.1 mouse_genomes_project 6 7795830 7804673 - AA545190 lincRNA lincRNA MGP_WSBEiJ_T0008375.1 MGP_WSBEiJ_G0006789.1 mouse_genomes_project 6 7796269 7804648 - AA545190 lincRNA lincRNA MGP_WSBEiJ_T0008376.1 MGP_WSBEiJ_G0006789.1 mouse_genomes_project 6 7796328 7798645 - AA545190 lincRNA lincRNA MGP_WSBEiJ_T0075411.1 MGP_WSBEiJ_G0029699.1 mouse_genomes_project 6 26819906 26821935 + MGP_WSBEiJ_P0075411 Gm9047 protein_coding protein_coding MGP_WSBEiJ_T0004985.1 MGP_WSBEiJ_G0004250.1 mouse_genomes_project 6 115115380 115116334 - Gm43964 antisense antisense MGP_WSBEiJ_T0014891.1 MGP_WSBEiJ_G0013021.1 mouse_genomes_project 6 49113406 49114536 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099656.1 MGP_WSBEiJ_G0038319.1 mouse_genomes_project 6 67313960 67314100 - Gm25910 snoRNA snoRNA MGP_WSBEiJ_T0008517.1 MGP_WSBEiJ_G0006891.1 mouse_genomes_project 6 87125525 87131703 - 2310040G24Rik lincRNA lincRNA MGP_WSBEiJ_T0008518.1 MGP_WSBEiJ_G0006891.1 mouse_genomes_project 6 87125525 87131726 - 2310040G24Rik lincRNA lincRNA MGP_WSBEiJ_T0075701.1 MGP_WSBEiJ_G0029742.1 mouse_genomes_project 6 32611275 32615217 - Cnot4 protein_coding retained_intron MGP_WSBEiJ_T0075702.1 MGP_WSBEiJ_G0029742.1 mouse_genomes_project 6 32611275 32727110 - MGP_WSBEiJ_P0075702 Cnot4 protein_coding protein_coding MGP_WSBEiJ_T0075703.1 MGP_WSBEiJ_G0029742.1 mouse_genomes_project 6 32611276 32727179 - MGP_WSBEiJ_P0075703 Cnot4 protein_coding protein_coding MGP_WSBEiJ_T0075704.1 MGP_WSBEiJ_G0029742.1 mouse_genomes_project 6 32611281 32727174 - MGP_WSBEiJ_P0075704 Cnot4 protein_coding protein_coding MGP_WSBEiJ_T0075705.1 MGP_WSBEiJ_G0029742.1 mouse_genomes_project 6 32638737 32727200 - MGP_WSBEiJ_P0075705 Cnot4 protein_coding protein_coding MGP_WSBEiJ_T0075706.1 MGP_WSBEiJ_G0029742.1 mouse_genomes_project 6 32640040 32679566 - MGP_WSBEiJ_P0075706 Cnot4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0075707.1 MGP_WSBEiJ_G0029742.1 mouse_genomes_project 6 32646262 32650211 - Cnot4 protein_coding retained_intron MGP_WSBEiJ_T0075708.1 MGP_WSBEiJ_G0029742.1 mouse_genomes_project 6 32646693 32727172 - Cnot4 protein_coding processed_transcript MGP_WSBEiJ_T0000168.1 MGP_WSBEiJ_G0000127.1 mouse_genomes_project 6 68243276 68243563 - MGP_WSBEiJ_P0000168 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000169.1 MGP_WSBEiJ_G0000127.1 mouse_genomes_project 6 68243276 68243747 - MGP_WSBEiJ_P0000169 IG_V_gene IG_V_gene MGP_WSBEiJ_T0008578.1 MGP_WSBEiJ_G0006939.1 mouse_genomes_project 6 119779372 119781130 - 1700069P05Rik lincRNA lincRNA MGP_WSBEiJ_T0078617.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178333 124197642 - MGP_WSBEiJ_P0078617 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078618.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178333 124197642 - MGP_WSBEiJ_P0078618 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078619.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178340 124200280 - MGP_WSBEiJ_P0078619 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078620.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178352 124200280 - MGP_WSBEiJ_P0078620 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078621.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178352 124199493 - MGP_WSBEiJ_P0078621 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078622.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178452 124200273 - MGP_WSBEiJ_P0078622 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078623.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178905 124200240 - Phc1 protein_coding retained_intron MGP_WSBEiJ_T0078624.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178905 124200240 - MGP_WSBEiJ_P0078624 Phc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078625.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124178906 124201068 - MGP_WSBEiJ_P0078625 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078626.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124186160 124197546 - MGP_WSBEiJ_P0078626 Phc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078627.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124186552 124201013 - MGP_WSBEiJ_P0078627 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078628.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124193294 124195772 - Phc1 protein_coding retained_intron MGP_WSBEiJ_T0078629.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124194017 124200731 - MGP_WSBEiJ_P0078629 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078630.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124194756 124200280 - MGP_WSBEiJ_P0078630 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078631.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124194757 124197923 - MGP_WSBEiJ_P0078631 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0078632.1 MGP_WSBEiJ_G0030394.1 mouse_genomes_project 6 124194761 124200255 - MGP_WSBEiJ_P0078632 Phc1 protein_coding protein_coding MGP_WSBEiJ_T0099654.1 MGP_WSBEiJ_G0038317.1 mouse_genomes_project 6 58101375 58101507 + Gm22367 snoRNA snoRNA MGP_WSBEiJ_T0015186.1 MGP_WSBEiJ_G0013316.1 mouse_genomes_project 6 146808128 146808597 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078962.1 MGP_WSBEiJ_G0030464.1 mouse_genomes_project 6 127500607 127501281 + Tnfrsf1a protein_coding processed_transcript MGP_WSBEiJ_T0078963.1 MGP_WSBEiJ_G0030464.1 mouse_genomes_project 6 127500696 127509764 + MGP_WSBEiJ_P0078963 Tnfrsf1a protein_coding protein_coding MGP_WSBEiJ_T0078964.1 MGP_WSBEiJ_G0030464.1 mouse_genomes_project 6 127500968 127514933 + MGP_WSBEiJ_P0078964 Tnfrsf1a protein_coding protein_coding MGP_WSBEiJ_T0078965.1 MGP_WSBEiJ_G0030464.1 mouse_genomes_project 6 127509818 127513554 + MGP_WSBEiJ_P0078965 Tnfrsf1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078966.1 MGP_WSBEiJ_G0030464.1 mouse_genomes_project 6 127510212 127514227 + MGP_WSBEiJ_P0078966 Tnfrsf1a protein_coding protein_coding MGP_WSBEiJ_T0078967.1 MGP_WSBEiJ_G0030464.1 mouse_genomes_project 6 127512875 127514323 + Tnfrsf1a protein_coding retained_intron MGP_WSBEiJ_T0004871.1 MGP_WSBEiJ_G0004180.1 mouse_genomes_project 6 50638708 50640335 + Hotairm1 antisense antisense MGP_WSBEiJ_T0004872.1 MGP_WSBEiJ_G0004180.1 mouse_genomes_project 6 50640238 50643938 + Hotairm1 antisense antisense MGP_WSBEiJ_T0004873.1 MGP_WSBEiJ_G0004180.1 mouse_genomes_project 6 50640330 50643839 + Hotairm1 antisense antisense MGP_WSBEiJ_T0100943.1 MGP_WSBEiJ_G0039400.1 mouse_genomes_project 6 135887574 135887939 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014870.1 MGP_WSBEiJ_G0013000.1 mouse_genomes_project 6 46066070 46066467 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015195.1 MGP_WSBEiJ_G0013325.1 mouse_genomes_project 6 152921447 152921770 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077665.1 MGP_WSBEiJ_G0030218.1 mouse_genomes_project 6 92326043 92340804 + MGP_WSBEiJ_P0077665 Tmem43 protein_coding protein_coding MGP_WSBEiJ_T0077666.1 MGP_WSBEiJ_G0030218.1 mouse_genomes_project 6 92326067 92329974 + Tmem43 protein_coding retained_intron MGP_WSBEiJ_T0077667.1 MGP_WSBEiJ_G0030218.1 mouse_genomes_project 6 92326091 92326816 + Tmem43 protein_coding processed_transcript MGP_WSBEiJ_T0077668.1 MGP_WSBEiJ_G0030218.1 mouse_genomes_project 6 92326099 92331481 + Tmem43 protein_coding retained_intron MGP_WSBEiJ_T0077669.1 MGP_WSBEiJ_G0030218.1 mouse_genomes_project 6 92328940 92330598 + Tmem43 protein_coding processed_transcript MGP_WSBEiJ_T0014868.1 MGP_WSBEiJ_G0012998.1 mouse_genomes_project 6 45776719 45776909 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014943.1 MGP_WSBEiJ_G0013073.1 mouse_genomes_project 6 65720620 65720846 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014896.1 MGP_WSBEiJ_G0013026.1 mouse_genomes_project 6 51237392 51237693 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077582.1 MGP_WSBEiJ_G0030196.1 mouse_genomes_project 6 90682681 90684586 - MGP_WSBEiJ_P0077582 Vmn1r45 protein_coding protein_coding MGP_WSBEiJ_T0015181.1 MGP_WSBEiJ_G0013311.1 mouse_genomes_project 6 144436677 144436883 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000043.1 MGP_WSBEiJ_G0000036.1 mouse_genomes_project 6 70560537 70560575 + MGP_WSBEiJ_P0000043 Igkj1 IG_J_gene IG_J_gene MGP_WSBEiJ_T0002130.1 MGP_WSBEiJ_G0002049.1 mouse_genomes_project 6 145093244 145097720 + TEC TEC MGP_WSBEiJ_T0078050.1 MGP_WSBEiJ_G0030291.1 mouse_genomes_project 6 114837495 114848045 + MGP_WSBEiJ_P0078050 Arpc4 protein_coding protein_coding MGP_WSBEiJ_T0075938.1 MGP_WSBEiJ_G0029812.1 mouse_genomes_project 6 39765619 39770158 + MGP_WSBEiJ_P0075938 Pip protein_coding protein_coding MGP_WSBEiJ_T0075939.1 MGP_WSBEiJ_G0029812.1 mouse_genomes_project 6 39765652 39770050 + MGP_WSBEiJ_P0075939 Pip protein_coding protein_coding MGP_WSBEiJ_T0075940.1 MGP_WSBEiJ_G0029812.1 mouse_genomes_project 6 39765669 39769677 + MGP_WSBEiJ_P0075940 Pip protein_coding protein_coding MGP_WSBEiJ_T0076145.1 MGP_WSBEiJ_G0029875.1 mouse_genomes_project 6 46846927 46852140 + MGP_WSBEiJ_P0076145 Repin1 protein_coding protein_coding MGP_WSBEiJ_T0076146.1 MGP_WSBEiJ_G0029875.1 mouse_genomes_project 6 46846927 46852140 + MGP_WSBEiJ_P0076146 Repin1 protein_coding protein_coding MGP_WSBEiJ_T0076147.1 MGP_WSBEiJ_G0029875.1 mouse_genomes_project 6 46846927 46850448 + MGP_WSBEiJ_P0076147 Repin1 protein_coding protein_coding MGP_WSBEiJ_T0076148.1 MGP_WSBEiJ_G0029875.1 mouse_genomes_project 6 46846935 46852141 + MGP_WSBEiJ_P0076148 Repin1 protein_coding protein_coding MGP_WSBEiJ_T0076149.1 MGP_WSBEiJ_G0029875.1 mouse_genomes_project 6 46846944 46852140 + MGP_WSBEiJ_P0076149 Repin1 protein_coding protein_coding MGP_WSBEiJ_T0076150.1 MGP_WSBEiJ_G0029875.1 mouse_genomes_project 6 46846984 46848378 + Repin1 protein_coding retained_intron MGP_WSBEiJ_T0076153.1 MGP_WSBEiJ_G0029875.1 mouse_genomes_project 6 46847363 46849684 + Repin1 protein_coding retained_intron MGP_WSBEiJ_T0077392.1 MGP_WSBEiJ_G0030157.1 mouse_genomes_project 6 87828885 88023179 - MGP_WSBEiJ_P0077392 Antxr1 protein_coding protein_coding MGP_WSBEiJ_T0077393.1 MGP_WSBEiJ_G0030157.1 mouse_genomes_project 6 87828898 87995762 - MGP_WSBEiJ_P0077393 Antxr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077394.1 MGP_WSBEiJ_G0030157.1 mouse_genomes_project 6 87852777 88023461 - MGP_WSBEiJ_P0077394 Antxr1 protein_coding protein_coding MGP_WSBEiJ_T0077395.1 MGP_WSBEiJ_G0030157.1 mouse_genomes_project 6 87873447 88023501 - MGP_WSBEiJ_P0077395 Antxr1 protein_coding protein_coding MGP_WSBEiJ_T0077396.1 MGP_WSBEiJ_G0030157.1 mouse_genomes_project 6 87892780 87957634 - Antxr1 protein_coding processed_transcript MGP_WSBEiJ_T0077397.1 MGP_WSBEiJ_G0030157.1 mouse_genomes_project 6 87967921 88023558 - Antxr1 protein_coding retained_intron MGP_WSBEiJ_T0008581.1 MGP_WSBEiJ_G0006942.1 mouse_genomes_project 6 121516658 121523135 - 4930540M05Rik lincRNA lincRNA MGP_WSBEiJ_T0076783.1 MGP_WSBEiJ_G0030038.1 mouse_genomes_project 6 72037908 72100283 + MGP_WSBEiJ_P0076783 St3gal5 protein_coding protein_coding MGP_WSBEiJ_T0076784.1 MGP_WSBEiJ_G0030038.1 mouse_genomes_project 6 72037939 72100283 + MGP_WSBEiJ_P0076784 St3gal5 protein_coding protein_coding MGP_WSBEiJ_T0076785.1 MGP_WSBEiJ_G0030038.1 mouse_genomes_project 6 72038073 72092426 + MGP_WSBEiJ_P0076785 St3gal5 protein_coding protein_coding MGP_WSBEiJ_T0076786.1 MGP_WSBEiJ_G0030038.1 mouse_genomes_project 6 72058678 72087738 + MGP_WSBEiJ_P0076786 St3gal5 protein_coding protein_coding MGP_WSBEiJ_T0001866.1 MGP_WSBEiJ_G0001786.1 mouse_genomes_project 6 1190597 1191322 - TEC TEC MGP_WSBEiJ_T0100311.1 MGP_WSBEiJ_G0038810.1 mouse_genomes_project 6 134512705 134516845 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100954.1 MGP_WSBEiJ_G0039411.1 mouse_genomes_project 6 136819573 136821594 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079039.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129711356 129746405 + MGP_WSBEiJ_P0079039 Parp11 protein_coding protein_coding MGP_WSBEiJ_T0079040.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129715717 129740304 + Parp11 protein_coding retained_intron MGP_WSBEiJ_T0079041.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129715745 129746356 + MGP_WSBEiJ_P0079041 Parp11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079042.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129715747 129763368 + MGP_WSBEiJ_P0079042 Parp11 protein_coding protein_coding MGP_WSBEiJ_T0079043.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129715763 129739202 + Parp11 protein_coding retained_intron MGP_WSBEiJ_T0079044.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129715772 129747327 + MGP_WSBEiJ_P0079044 Parp11 protein_coding protein_coding MGP_WSBEiJ_T0079045.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129739802 129741561 + Parp11 protein_coding retained_intron MGP_WSBEiJ_T0079046.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129742417 129747218 + Parp11 protein_coding retained_intron MGP_WSBEiJ_T0079047.1 MGP_WSBEiJ_G0030482.1 mouse_genomes_project 6 129745926 129759187 + Parp11 protein_coding retained_intron MGP_WSBEiJ_T0008484.1 MGP_WSBEiJ_G0006864.1 mouse_genomes_project 6 60359553 60360241 - Gm43894 lincRNA lincRNA MGP_WSBEiJ_T0076445.1 MGP_WSBEiJ_G0029944.1 mouse_genomes_project 6 53797180 53801614 - MGP_WSBEiJ_P0076445 Inmt protein_coding protein_coding MGP_WSBEiJ_T0076446.1 MGP_WSBEiJ_G0029944.1 mouse_genomes_project 6 53799332 53801585 - Inmt protein_coding retained_intron MGP_WSBEiJ_T0079202.1 MGP_WSBEiJ_G0030525.1 mouse_genomes_project 6 132225842 132262390 - MGP_WSBEiJ_P0079202 Klrc1 protein_coding protein_coding MGP_WSBEiJ_T0079203.1 MGP_WSBEiJ_G0030525.1 mouse_genomes_project 6 132232896 132262345 - MGP_WSBEiJ_P0079203 Klrc1 protein_coding protein_coding MGP_WSBEiJ_T0079204.1 MGP_WSBEiJ_G0030525.1 mouse_genomes_project 6 132232897 132262390 - MGP_WSBEiJ_P0079204 Klrc1 protein_coding protein_coding MGP_WSBEiJ_T0079205.1 MGP_WSBEiJ_G0030525.1 mouse_genomes_project 6 132232921 132262327 - MGP_WSBEiJ_P0079205 Klrc1 protein_coding protein_coding MGP_WSBEiJ_T0004851.1 MGP_WSBEiJ_G0004163.1 mouse_genomes_project 6 32286869 32295790 - Gm14547 antisense antisense MGP_WSBEiJ_T0001912.1 MGP_WSBEiJ_G0001832.1 mouse_genomes_project 6 37845886 37847600 + TEC TEC MGP_WSBEiJ_T0077952.1 MGP_WSBEiJ_G0030276.1 mouse_genomes_project 6 113690583 113747329 + MGP_WSBEiJ_P0077952 Lmcd1 protein_coding protein_coding MGP_WSBEiJ_T0005037.1 MGP_WSBEiJ_G0004296.1 mouse_genomes_project 6 146885418 146906118 - 1700126G02Rik antisense antisense MGP_WSBEiJ_T0014790.1 MGP_WSBEiJ_G0012920.1 mouse_genomes_project 6 4651088 4651278 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076084.1 MGP_WSBEiJ_G0029860.1 mouse_genomes_project 6 46053981 46061990 + Zfp398 protein_coding retained_intron MGP_WSBEiJ_T0076085.1 MGP_WSBEiJ_G0029860.1 mouse_genomes_project 6 46053984 46080386 + MGP_WSBEiJ_P0076085 Zfp398 protein_coding protein_coding MGP_WSBEiJ_T0076086.1 MGP_WSBEiJ_G0029860.1 mouse_genomes_project 6 46054015 46086232 + MGP_WSBEiJ_P0076086 Zfp398 protein_coding protein_coding MGP_WSBEiJ_T0014833.1 MGP_WSBEiJ_G0012963.1 mouse_genomes_project 6 27341146 27342301 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075903.1 MGP_WSBEiJ_G0029791.1 mouse_genomes_project 6 38738471 38748483 - MGP_WSBEiJ_P0075903 Moxd2 protein_coding protein_coding MGP_WSBEiJ_T0000303.1 MGP_WSBEiJ_G0000251.1 mouse_genomes_project 6 70291313 70291615 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0000273.1 MGP_WSBEiJ_G0000221.1 mouse_genomes_project 6 67383400 67383893 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0076629.1 MGP_WSBEiJ_G0030004.1 mouse_genomes_project 6 64801299 64907517 + MGP_WSBEiJ_P0076629 Tnip3 protein_coding protein_coding MGP_WSBEiJ_T0076630.1 MGP_WSBEiJ_G0030004.1 mouse_genomes_project 6 64864565 64874400 + Tnip3 protein_coding retained_intron MGP_WSBEiJ_T0076631.1 MGP_WSBEiJ_G0030004.1 mouse_genomes_project 6 64864577 64865811 + Tnip3 protein_coding processed_transcript MGP_WSBEiJ_T0076632.1 MGP_WSBEiJ_G0030004.1 mouse_genomes_project 6 64864608 64867920 + Tnip3 protein_coding retained_intron MGP_WSBEiJ_T0076633.1 MGP_WSBEiJ_G0030004.1 mouse_genomes_project 6 64864636 64869333 + Tnip3 protein_coding retained_intron MGP_WSBEiJ_T0076634.1 MGP_WSBEiJ_G0030004.1 mouse_genomes_project 6 64871793 64874423 + Tnip3 protein_coding retained_intron MGP_WSBEiJ_T0075891.1 MGP_WSBEiJ_G0029787.1 mouse_genomes_project 6 38414332 38418596 + MGP_WSBEiJ_P0075891 Olfr460 protein_coding protein_coding MGP_WSBEiJ_T0008367.1 MGP_WSBEiJ_G0006784.1 mouse_genomes_project 6 3413294 3494560 - Gm20618 lincRNA lincRNA MGP_WSBEiJ_T0008368.1 MGP_WSBEiJ_G0006784.1 mouse_genomes_project 6 3442169 3504404 - Gm20618 lincRNA lincRNA MGP_WSBEiJ_T0076726.1 MGP_WSBEiJ_G0030031.1 mouse_genomes_project 6 71442311 71463822 + Chmp3 protein_coding processed_transcript MGP_WSBEiJ_T0076727.1 MGP_WSBEiJ_G0030031.1 mouse_genomes_project 6 71442329 71487835 + MGP_WSBEiJ_P0076727 Chmp3 protein_coding protein_coding MGP_WSBEiJ_T0076728.1 MGP_WSBEiJ_G0030031.1 mouse_genomes_project 6 71442388 71483020 + MGP_WSBEiJ_P0076728 Chmp3 protein_coding protein_coding MGP_WSBEiJ_T0076729.1 MGP_WSBEiJ_G0030031.1 mouse_genomes_project 6 71442388 71463841 + MGP_WSBEiJ_P0076729 Chmp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076730.1 MGP_WSBEiJ_G0030031.1 mouse_genomes_project 6 71442812 71479354 + Chmp3 protein_coding processed_transcript MGP_WSBEiJ_T0076731.1 MGP_WSBEiJ_G0030031.1 mouse_genomes_project 6 71482816 71485043 + Chmp3 protein_coding retained_intron MGP_WSBEiJ_T0099699.1 MGP_WSBEiJ_G0038362.1 mouse_genomes_project 6 152501585 152501722 - Gm23456 snoRNA snoRNA MGP_WSBEiJ_T0000151.1 MGP_WSBEiJ_G0000114.1 mouse_genomes_project 6 67355678 67355965 - MGP_WSBEiJ_P0000151 IG_V_gene IG_V_gene MGP_WSBEiJ_T0100890.1 MGP_WSBEiJ_G0039348.1 mouse_genomes_project 6 39391428 39392966 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0078714.1 MGP_WSBEiJ_G0030419.1 mouse_genomes_project 6 126425061 126444257 - MGP_WSBEiJ_P0078714 Pex5 protein_coding protein_coding MGP_WSBEiJ_T0078715.1 MGP_WSBEiJ_G0030419.1 mouse_genomes_project 6 126425062 126443623 - MGP_WSBEiJ_P0078715 Pex5 protein_coding protein_coding MGP_WSBEiJ_T0078716.1 MGP_WSBEiJ_G0030419.1 mouse_genomes_project 6 126425062 126444257 - MGP_WSBEiJ_P0078716 Pex5 protein_coding protein_coding MGP_WSBEiJ_T0078717.1 MGP_WSBEiJ_G0030419.1 mouse_genomes_project 6 126425062 126444053 - MGP_WSBEiJ_P0078717 Pex5 protein_coding protein_coding MGP_WSBEiJ_T0078718.1 MGP_WSBEiJ_G0030419.1 mouse_genomes_project 6 126425077 126444227 - MGP_WSBEiJ_P0078718 Pex5 protein_coding protein_coding MGP_WSBEiJ_T0078719.1 MGP_WSBEiJ_G0030419.1 mouse_genomes_project 6 126426157 126428817 - Pex5 protein_coding retained_intron MGP_WSBEiJ_T0078720.1 MGP_WSBEiJ_G0030419.1 mouse_genomes_project 6 126432337 126443214 - Pex5 protein_coding processed_transcript MGP_WSBEiJ_T0078721.1 MGP_WSBEiJ_G0030419.1 mouse_genomes_project 6 126433520 126434575 - Pex5 protein_coding retained_intron MGP_WSBEiJ_T0076521.1 MGP_WSBEiJ_G0029974.1 mouse_genomes_project 6 56352327 56437222 + MGP_WSBEiJ_P0076521 Herc6 protein_coding protein_coding MGP_WSBEiJ_T0076522.1 MGP_WSBEiJ_G0029974.1 mouse_genomes_project 6 56352335 56359524 + MGP_WSBEiJ_P0076522 Herc6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076523.1 MGP_WSBEiJ_G0029974.1 mouse_genomes_project 6 56375487 56399988 + Herc6 protein_coding retained_intron MGP_WSBEiJ_T0076524.1 MGP_WSBEiJ_G0029974.1 mouse_genomes_project 6 56378695 56383654 + Herc6 protein_coding retained_intron MGP_WSBEiJ_T0076525.1 MGP_WSBEiJ_G0029974.1 mouse_genomes_project 6 56380194 56389369 + Herc6 protein_coding retained_intron MGP_WSBEiJ_T0076526.1 MGP_WSBEiJ_G0029974.1 mouse_genomes_project 6 56383591 56390626 + Herc6 protein_coding retained_intron MGP_WSBEiJ_T0010597.1 MGP_WSBEiJ_G0008754.1 mouse_genomes_project 6 50065971 50066048 + Gm22914 miRNA miRNA MGP_WSBEiJ_T0078640.1 MGP_WSBEiJ_G0030396.1 mouse_genomes_project 6 124382066 124391553 + MGP_WSBEiJ_P0078640 Mfap5 protein_coding protein_coding MGP_WSBEiJ_T0078641.1 MGP_WSBEiJ_G0030396.1 mouse_genomes_project 6 124389776 124406132 + MGP_WSBEiJ_P0078641 Mfap5 protein_coding protein_coding MGP_WSBEiJ_T0078642.1 MGP_WSBEiJ_G0030396.1 mouse_genomes_project 6 124389776 124405608 + MGP_WSBEiJ_P0078642 Mfap5 protein_coding protein_coding MGP_WSBEiJ_T0078643.1 MGP_WSBEiJ_G0030396.1 mouse_genomes_project 6 124389852 124405474 + MGP_WSBEiJ_P0078643 Mfap5 protein_coding protein_coding MGP_WSBEiJ_T0078644.1 MGP_WSBEiJ_G0030396.1 mouse_genomes_project 6 124389869 124405474 + MGP_WSBEiJ_P0078644 Mfap5 protein_coding protein_coding MGP_WSBEiJ_T0078645.1 MGP_WSBEiJ_G0030396.1 mouse_genomes_project 6 124389869 124405180 + MGP_WSBEiJ_P0078645 Mfap5 protein_coding protein_coding MGP_WSBEiJ_T0078646.1 MGP_WSBEiJ_G0030396.1 mouse_genomes_project 6 124389900 124404132 + MGP_WSBEiJ_P0078646 Mfap5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078647.1 MGP_WSBEiJ_G0030396.1 mouse_genomes_project 6 124398215 124405477 + Mfap5 protein_coding retained_intron MGP_WSBEiJ_T0015091.1 MGP_WSBEiJ_G0013221.1 mouse_genomes_project 6 119316080 119316581 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010571.1 MGP_WSBEiJ_G0008728.1 mouse_genomes_project 6 421522 421607 - Mir653 miRNA miRNA MGP_WSBEiJ_T0002052.1 MGP_WSBEiJ_G0001972.1 mouse_genomes_project 6 98182210 98185737 + TEC TEC MGP_WSBEiJ_T0075759.1 MGP_WSBEiJ_G0029755.1 mouse_genomes_project 6 35788670 35796117 + MGP_WSBEiJ_P0075759 Tmem213 protein_coding protein_coding MGP_WSBEiJ_T0015156.1 MGP_WSBEiJ_G0013286.1 mouse_genomes_project 6 135486702 135487173 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076164.1 MGP_WSBEiJ_G0029881.1 mouse_genomes_project 6 46940434 46947264 + MGP_WSBEiJ_P0076164 Gimap4 protein_coding protein_coding MGP_WSBEiJ_T0076165.1 MGP_WSBEiJ_G0029881.1 mouse_genomes_project 6 46940463 46947946 + MGP_WSBEiJ_P0076165 Gimap4 protein_coding protein_coding MGP_WSBEiJ_T0076166.1 MGP_WSBEiJ_G0029881.1 mouse_genomes_project 6 46940463 46947946 + MGP_WSBEiJ_P0076166 Gimap4 protein_coding protein_coding MGP_WSBEiJ_T0076167.1 MGP_WSBEiJ_G0029881.1 mouse_genomes_project 6 46940466 46947763 + MGP_WSBEiJ_P0076167 Gimap4 protein_coding protein_coding MGP_WSBEiJ_T0076168.1 MGP_WSBEiJ_G0029881.1 mouse_genomes_project 6 46940466 46947943 + MGP_WSBEiJ_P0076168 Gimap4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076169.1 MGP_WSBEiJ_G0029881.1 mouse_genomes_project 6 46940467 46947946 + MGP_WSBEiJ_P0076169 Gimap4 protein_coding protein_coding MGP_WSBEiJ_T0015010.1 MGP_WSBEiJ_G0013140.1 mouse_genomes_project 6 86540100 86540877 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077418.1 MGP_WSBEiJ_G0030166.1 mouse_genomes_project 6 88483050 88484747 + MGP_WSBEiJ_P0077418 Gp9 protein_coding protein_coding MGP_WSBEiJ_T0010644.1 MGP_WSBEiJ_G0008801.1 mouse_genomes_project 6 140186665 140186806 - Gm44364 miRNA miRNA MGP_WSBEiJ_T0010605.1 MGP_WSBEiJ_G0008762.1 mouse_genomes_project 6 83421836 83421899 + Mir7040 miRNA miRNA MGP_WSBEiJ_T0099645.1 MGP_WSBEiJ_G0038308.1 mouse_genomes_project 6 44580521 44580653 - Gm25161 snoRNA snoRNA MGP_WSBEiJ_T0075724.1 MGP_WSBEiJ_G0029748.1 mouse_genomes_project 6 34313453 34421343 - MGP_WSBEiJ_P0075724 Ptn protein_coding protein_coding MGP_WSBEiJ_T0075725.1 MGP_WSBEiJ_G0029748.1 mouse_genomes_project 6 34338193 34421302 - MGP_WSBEiJ_P0075725 Ptn protein_coding protein_coding MGP_WSBEiJ_T0002050.1 MGP_WSBEiJ_G0001970.1 mouse_genomes_project 6 94388443 94388926 - TEC TEC MGP_WSBEiJ_T0077419.1 MGP_WSBEiJ_G0030167.1 mouse_genomes_project 6 88495107 88519719 - MGP_WSBEiJ_P0077419 Rab43 protein_coding protein_coding MGP_WSBEiJ_T0077420.1 MGP_WSBEiJ_G0030167.1 mouse_genomes_project 6 88495107 88517694 - MGP_WSBEiJ_P0077420 Rab43 protein_coding protein_coding MGP_WSBEiJ_T0077422.1 MGP_WSBEiJ_G0030167.1 mouse_genomes_project 6 88495119 88496331 - Rab43 protein_coding processed_transcript MGP_WSBEiJ_T0077423.1 MGP_WSBEiJ_G0030167.1 mouse_genomes_project 6 88497754 88517697 - Rab43 protein_coding processed_transcript MGP_WSBEiJ_T0077424.1 MGP_WSBEiJ_G0030167.1 mouse_genomes_project 6 88498313 88520104 - Rab43 protein_coding processed_transcript MGP_WSBEiJ_T0077426.1 MGP_WSBEiJ_G0030167.1 mouse_genomes_project 6 88498959 88520038 - Rab43 protein_coding processed_transcript MGP_WSBEiJ_T0077427.1 MGP_WSBEiJ_G0030167.1 mouse_genomes_project 6 88500130 88519719 - MGP_WSBEiJ_P0077427 Rab43 protein_coding protein_coding MGP_WSBEiJ_T0017702.1 MGP_WSBEiJ_G0015064.1 mouse_genomes_project 6 110093405 110095907 + Gm17055 processed_transcript lincRNA MGP_WSBEiJ_T0017703.1 MGP_WSBEiJ_G0015064.1 mouse_genomes_project 6 110093533 110096027 + Gm17055 processed_transcript retained_intron MGP_WSBEiJ_T0014824.1 MGP_WSBEiJ_G0012954.1 mouse_genomes_project 6 20344606 20346004 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015107.1 MGP_WSBEiJ_G0013237.1 mouse_genomes_project 6 124153988 124154370 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078548.1 MGP_WSBEiJ_G0030379.1 mouse_genomes_project 6 122475183 122483979 - Atp6v1e1 protein_coding retained_intron MGP_WSBEiJ_T0078549.1 MGP_WSBEiJ_G0030379.1 mouse_genomes_project 6 122476114 122499549 - MGP_WSBEiJ_P0078549 Atp6v1e1 protein_coding protein_coding MGP_WSBEiJ_T0078550.1 MGP_WSBEiJ_G0030379.1 mouse_genomes_project 6 122476124 122495160 - MGP_WSBEiJ_P0078550 Atp6v1e1 protein_coding protein_coding MGP_WSBEiJ_T0078551.1 MGP_WSBEiJ_G0030379.1 mouse_genomes_project 6 122485299 122499441 - Atp6v1e1 protein_coding retained_intron MGP_WSBEiJ_T0078552.1 MGP_WSBEiJ_G0030379.1 mouse_genomes_project 6 122485637 122499448 - MGP_WSBEiJ_P0078552 Atp6v1e1 protein_coding protein_coding MGP_WSBEiJ_T0078553.1 MGP_WSBEiJ_G0030379.1 mouse_genomes_project 6 122489256 122499295 - MGP_WSBEiJ_P0078553 Atp6v1e1 protein_coding protein_coding MGP_WSBEiJ_T0075946.1 MGP_WSBEiJ_G0029815.1 mouse_genomes_project 6 39882349 39887299 + MGP_WSBEiJ_P0075946 Sval3 protein_coding protein_coding MGP_WSBEiJ_T0002518.1 MGP_WSBEiJ_G0002427.1 mouse_genomes_project 6 39423419 39423472 + MGP_WSBEiJ_P0002518 Trbj1-6 TR_J_gene TR_J_gene MGP_WSBEiJ_T0077810.1 MGP_WSBEiJ_G0030249.1 mouse_genomes_project 6 98889761 99109400 + MGP_WSBEiJ_P0077810 Mitf protein_coding protein_coding MGP_WSBEiJ_T0077811.1 MGP_WSBEiJ_G0030249.1 mouse_genomes_project 6 98889767 99030915 + Mitf protein_coding retained_intron MGP_WSBEiJ_T0077812.1 MGP_WSBEiJ_G0030249.1 mouse_genomes_project 6 98889767 99112156 + MGP_WSBEiJ_P0077812 Mitf protein_coding protein_coding MGP_WSBEiJ_T0077813.1 MGP_WSBEiJ_G0030249.1 mouse_genomes_project 6 99012833 99109514 + MGP_WSBEiJ_P0077813 Mitf protein_coding protein_coding MGP_WSBEiJ_T0077814.1 MGP_WSBEiJ_G0030249.1 mouse_genomes_project 6 99029653 99109514 + MGP_WSBEiJ_P0077814 Mitf protein_coding protein_coding MGP_WSBEiJ_T0077815.1 MGP_WSBEiJ_G0030249.1 mouse_genomes_project 6 99081810 99109514 + MGP_WSBEiJ_P0077815 Mitf protein_coding protein_coding MGP_WSBEiJ_T0077816.1 MGP_WSBEiJ_G0030249.1 mouse_genomes_project 6 99081837 99109304 + MGP_WSBEiJ_P0077816 Mitf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077817.1 MGP_WSBEiJ_G0030249.1 mouse_genomes_project 6 99081939 99108982 + MGP_WSBEiJ_P0077817 Mitf protein_coding protein_coding MGP_WSBEiJ_T0075284.1 MGP_WSBEiJ_G0029670.1 mouse_genomes_project 6 21814093 21821748 + MGP_WSBEiJ_P0075284 Lmod2 protein_coding protein_coding MGP_WSBEiJ_T0077134.1 MGP_WSBEiJ_G0030111.1 mouse_genomes_project 6 84223879 84225421 - Paip2b protein_coding retained_intron MGP_WSBEiJ_T0077135.1 MGP_WSBEiJ_G0030111.1 mouse_genomes_project 6 84224059 84248258 - MGP_WSBEiJ_P0077135 Paip2b protein_coding unknown_likely_coding MGP_WSBEiJ_T0077136.1 MGP_WSBEiJ_G0030111.1 mouse_genomes_project 6 84224934 84248258 - Paip2b protein_coding retained_intron MGP_WSBEiJ_T0077137.1 MGP_WSBEiJ_G0030111.1 mouse_genomes_project 6 84228075 84248258 - Paip2b protein_coding retained_intron MGP_WSBEiJ_T0077138.1 MGP_WSBEiJ_G0030111.1 mouse_genomes_project 6 84248001 84248245 - Paip2b protein_coding retained_intron MGP_WSBEiJ_T0005053.1 MGP_WSBEiJ_G0004310.1 mouse_genomes_project 6 152190515 152193832 + Gm44020 antisense antisense MGP_WSBEiJ_T0015110.1 MGP_WSBEiJ_G0013240.1 mouse_genomes_project 6 124285922 124286214 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076546.1 MGP_WSBEiJ_G0029986.1 mouse_genomes_project 6 57245370 57246393 + MGP_WSBEiJ_P0076546 Vmn1r29 protein_coding protein_coding MGP_WSBEiJ_T0002091.1 MGP_WSBEiJ_G0002010.1 mouse_genomes_project 6 122603932 122606026 - TEC TEC MGP_WSBEiJ_T0078303.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117808297 117884913 + MGP_WSBEiJ_P0078303 protein_coding protein_coding MGP_WSBEiJ_T0078304.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117808304 117884916 + MGP_WSBEiJ_P0078304 protein_coding protein_coding MGP_WSBEiJ_T0078305.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117808306 117884913 + MGP_WSBEiJ_P0078305 protein_coding protein_coding MGP_WSBEiJ_T0078306.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117808317 117881126 + MGP_WSBEiJ_P0078306 protein_coding protein_coding MGP_WSBEiJ_T0078307.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117808326 117881114 + MGP_WSBEiJ_P0078307 protein_coding protein_coding MGP_WSBEiJ_T0078308.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117808337 117850668 + MGP_WSBEiJ_P0078308 protein_coding protein_coding MGP_WSBEiJ_T0078309.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117822320 117825430 + protein_coding retained_intron MGP_WSBEiJ_T0078310.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117822829 117878886 + MGP_WSBEiJ_P0078310 protein_coding protein_coding MGP_WSBEiJ_T0078311.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117822870 117850729 + MGP_WSBEiJ_P0078311 protein_coding protein_coding MGP_WSBEiJ_T0078312.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117850558 117876889 + protein_coding retained_intron MGP_WSBEiJ_T0078313.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117861531 117881597 + MGP_WSBEiJ_P0078313 protein_coding protein_coding MGP_WSBEiJ_T0078314.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117861557 117881507 + protein_coding retained_intron MGP_WSBEiJ_T0078315.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117867991 117877315 + protein_coding processed_transcript MGP_WSBEiJ_T0078316.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117878449 117881155 + protein_coding processed_transcript MGP_WSBEiJ_T0078317.1 MGP_WSBEiJ_G0030337.1 mouse_genomes_project 6 117880549 117881678 + protein_coding processed_transcript MGP_WSBEiJ_T0008617.1 MGP_WSBEiJ_G0006968.1 mouse_genomes_project 6 142889387 142896364 - 4922502N22Rik lincRNA lincRNA MGP_WSBEiJ_T0015191.1 MGP_WSBEiJ_G0013321.1 mouse_genomes_project 6 152088992 152089395 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010601.1 MGP_WSBEiJ_G0008758.1 mouse_genomes_project 6 71148509 71148640 + Mir8112 miRNA miRNA MGP_WSBEiJ_T0076710.1 MGP_WSBEiJ_G0030026.1 mouse_genomes_project 6 71148515 71162327 + MGP_WSBEiJ_P0076710 Krcc1 protein_coding protein_coding MGP_WSBEiJ_T0076711.1 MGP_WSBEiJ_G0030026.1 mouse_genomes_project 6 71148539 71161248 + MGP_WSBEiJ_P0076711 Krcc1 protein_coding protein_coding MGP_WSBEiJ_T0076712.1 MGP_WSBEiJ_G0030026.1 mouse_genomes_project 6 71148851 71162327 + MGP_WSBEiJ_P0076712 Krcc1 protein_coding protein_coding MGP_WSBEiJ_T0076713.1 MGP_WSBEiJ_G0030026.1 mouse_genomes_project 6 71159286 71162326 + MGP_WSBEiJ_P0076713 Krcc1 protein_coding protein_coding MGP_WSBEiJ_T0008489.1 MGP_WSBEiJ_G0006868.1 mouse_genomes_project 6 71031383 71032692 + Gm44427 lincRNA lincRNA MGP_WSBEiJ_T0008386.1 MGP_WSBEiJ_G0006796.1 mouse_genomes_project 6 14312393 14313002 + Gm29591 lincRNA lincRNA MGP_WSBEiJ_T0078610.1 MGP_WSBEiJ_G0030390.1 mouse_genomes_project 6 123759705 123774580 + protein_coding retained_intron MGP_WSBEiJ_T0004820.1 MGP_WSBEiJ_G0004141.1 mouse_genomes_project 6 3628999 3673236 - Dlx6os1 antisense antisense MGP_WSBEiJ_T0004821.1 MGP_WSBEiJ_G0004141.1 mouse_genomes_project 6 3629353 3683793 - Dlx6os1 antisense antisense MGP_WSBEiJ_T0100886.1 MGP_WSBEiJ_G0039344.1 mouse_genomes_project 6 38644281 38714062 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001949.1 MGP_WSBEiJ_G0001869.1 mouse_genomes_project 6 53298298 53298710 + TEC TEC MGP_WSBEiJ_T0001992.1 MGP_WSBEiJ_G0001912.1 mouse_genomes_project 6 80596592 80598284 + TEC TEC MGP_WSBEiJ_T0010624.1 MGP_WSBEiJ_G0008781.1 mouse_genomes_project 6 116488187 116488282 + Gm24767 miRNA miRNA MGP_WSBEiJ_T0010623.1 MGP_WSBEiJ_G0008780.1 mouse_genomes_project 6 115186489 115186547 + Mir7042 miRNA miRNA MGP_WSBEiJ_T0008370.1 MGP_WSBEiJ_G0006786.1 mouse_genomes_project 6 4096637 4101486 + Gm19272 lincRNA lincRNA MGP_WSBEiJ_T0008371.1 MGP_WSBEiJ_G0006786.1 mouse_genomes_project 6 4096637 4104464 + Gm19272 lincRNA lincRNA MGP_WSBEiJ_T0079541.1 MGP_WSBEiJ_G0030621.1 mouse_genomes_project 6 145587475 145630528 - MGP_WSBEiJ_P0079541 Slco1a1 protein_coding protein_coding MGP_WSBEiJ_T0079542.1 MGP_WSBEiJ_G0030621.1 mouse_genomes_project 6 145587514 145630204 - MGP_WSBEiJ_P0079542 Slco1a1 protein_coding protein_coding MGP_WSBEiJ_T0079543.1 MGP_WSBEiJ_G0030621.1 mouse_genomes_project 6 145605428 145630382 - Slco1a1 protein_coding retained_intron MGP_WSBEiJ_T0000292.1 MGP_WSBEiJ_G0000240.1 mouse_genomes_project 6 69031836 69032129 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0015114.1 MGP_WSBEiJ_G0013244.1 mouse_genomes_project 6 125003915 125004066 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011437.1 MGP_WSBEiJ_G0009594.1 mouse_genomes_project 6 44104288 44104592 + Gm22839 misc_RNA misc_RNA MGP_WSBEiJ_T0004844.1 MGP_WSBEiJ_G0004157.1 mouse_genomes_project 6 29924051 29927641 + Plxna4os2 antisense antisense MGP_WSBEiJ_T0100919.1 MGP_WSBEiJ_G0039377.1 mouse_genomes_project 6 86325488 86377605 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0076359.1 MGP_WSBEiJ_G0029928.1 mouse_genomes_project 6 51285765 51428486 - Jazf1 protein_coding processed_transcript MGP_WSBEiJ_T0076360.1 MGP_WSBEiJ_G0029928.1 mouse_genomes_project 6 51285765 51295278 - Jazf1 protein_coding processed_transcript MGP_WSBEiJ_T0076361.1 MGP_WSBEiJ_G0029928.1 mouse_genomes_project 6 51285765 51589995 - MGP_WSBEiJ_P0076361 Jazf1 protein_coding protein_coding MGP_WSBEiJ_T0004895.1 MGP_WSBEiJ_G0004198.1 mouse_genomes_project 6 72066444 72069172 - 4933431G14Rik antisense antisense MGP_WSBEiJ_T0004896.1 MGP_WSBEiJ_G0004198.1 mouse_genomes_project 6 72066444 72069429 - 4933431G14Rik antisense antisense MGP_WSBEiJ_T0005007.1 MGP_WSBEiJ_G0004271.1 mouse_genomes_project 6 129053043 129055833 + Gm42574 antisense antisense MGP_WSBEiJ_T0078031.1 MGP_WSBEiJ_G0030288.1 mouse_genomes_project 6 114779578 114786557 + MGP_WSBEiJ_P0078031 Ogg1 protein_coding protein_coding MGP_WSBEiJ_T0078032.1 MGP_WSBEiJ_G0030288.1 mouse_genomes_project 6 114779591 114781068 + Ogg1 protein_coding retained_intron MGP_WSBEiJ_T0078033.1 MGP_WSBEiJ_G0030288.1 mouse_genomes_project 6 114779605 114786553 + MGP_WSBEiJ_P0078033 Ogg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078034.1 MGP_WSBEiJ_G0030288.1 mouse_genomes_project 6 114779614 114781575 + Ogg1 protein_coding processed_transcript MGP_WSBEiJ_T0078035.1 MGP_WSBEiJ_G0030288.1 mouse_genomes_project 6 114779619 114786355 + MGP_WSBEiJ_P0078035 Ogg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078036.1 MGP_WSBEiJ_G0030288.1 mouse_genomes_project 6 114779717 114781199 + Ogg1 protein_coding retained_intron MGP_WSBEiJ_T0078037.1 MGP_WSBEiJ_G0030288.1 mouse_genomes_project 6 114785687 114787437 + Ogg1 protein_coding retained_intron MGP_WSBEiJ_T0075151.1 MGP_WSBEiJ_G0029644.1 mouse_genomes_project 6 14428736 14543450 + MGP_WSBEiJ_P0075151 Met protein_coding protein_coding MGP_WSBEiJ_T0075152.1 MGP_WSBEiJ_G0029644.1 mouse_genomes_project 6 14428763 14457365 + MGP_WSBEiJ_P0075152 Met protein_coding protein_coding MGP_WSBEiJ_T0075153.1 MGP_WSBEiJ_G0029644.1 mouse_genomes_project 6 14428974 14541701 + MGP_WSBEiJ_P0075153 Met protein_coding protein_coding MGP_WSBEiJ_T0075154.1 MGP_WSBEiJ_G0029644.1 mouse_genomes_project 6 14429043 14509496 + Met protein_coding retained_intron MGP_WSBEiJ_T0075155.1 MGP_WSBEiJ_G0029644.1 mouse_genomes_project 6 14456858 14540275 + MGP_WSBEiJ_P0075155 Met protein_coding protein_coding MGP_WSBEiJ_T0075156.1 MGP_WSBEiJ_G0029644.1 mouse_genomes_project 6 14502367 14515297 + MGP_WSBEiJ_P0075156 Met protein_coding protein_coding MGP_WSBEiJ_T0075157.1 MGP_WSBEiJ_G0029644.1 mouse_genomes_project 6 14515059 14521452 + MGP_WSBEiJ_P0075157 Met protein_coding protein_coding MGP_WSBEiJ_T0008502.1 MGP_WSBEiJ_G0006881.1 mouse_genomes_project 6 82015200 82057828 - Gm43902 lincRNA lincRNA MGP_WSBEiJ_T0075888.1 MGP_WSBEiJ_G0029785.1 mouse_genomes_project 6 38359940 38364625 - MGP_WSBEiJ_P0075888 Prss37 protein_coding protein_coding MGP_WSBEiJ_T0075889.1 MGP_WSBEiJ_G0029785.1 mouse_genomes_project 6 38364285 38364600 - Prss37 protein_coding processed_transcript MGP_WSBEiJ_T0076248.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48436475 48531144 + MGP_WSBEiJ_P0076248 Mpp6 protein_coding protein_coding MGP_WSBEiJ_T0076249.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48436483 48531133 + MGP_WSBEiJ_P0076249 Mpp6 protein_coding protein_coding MGP_WSBEiJ_T0076250.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48436512 48531485 + MGP_WSBEiJ_P0076250 Mpp6 protein_coding protein_coding MGP_WSBEiJ_T0076251.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48436514 48440005 + Mpp6 protein_coding retained_intron MGP_WSBEiJ_T0076252.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48436593 48530970 + MGP_WSBEiJ_P0076252 Mpp6 protein_coding protein_coding MGP_WSBEiJ_T0076253.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48436617 48493898 + MGP_WSBEiJ_P0076253 Mpp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076254.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48437069 48511397 + MGP_WSBEiJ_P0076254 Mpp6 protein_coding protein_coding MGP_WSBEiJ_T0076255.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48511083 48528774 + Mpp6 protein_coding processed_transcript MGP_WSBEiJ_T0076258.1 MGP_WSBEiJ_G0029902.1 mouse_genomes_project 6 48525208 48530873 + Mpp6 protein_coding retained_intron MGP_WSBEiJ_T0017719.1 MGP_WSBEiJ_G0015071.1 mouse_genomes_project 6 132101213 132103081 - 1700101I11Rik processed_transcript TEC MGP_WSBEiJ_T0017720.1 MGP_WSBEiJ_G0015071.1 mouse_genomes_project 6 132101357 132102548 - 1700101I11Rik processed_transcript antisense MGP_WSBEiJ_T0015019.1 MGP_WSBEiJ_G0013149.1 mouse_genomes_project 6 93156593 93156749 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008591.1 MGP_WSBEiJ_G0006952.1 mouse_genomes_project 6 129541487 129553585 - Gm38404 lincRNA lincRNA MGP_WSBEiJ_T0000184.1 MGP_WSBEiJ_G0000139.1 mouse_genomes_project 6 69685032 69685495 - MGP_WSBEiJ_P0000184 Igkv12-38 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000185.1 MGP_WSBEiJ_G0000139.1 mouse_genomes_project 6 69685032 69685495 - MGP_WSBEiJ_P0000185 Igkv12-38 IG_V_gene IG_V_gene MGP_WSBEiJ_T0076969.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83423391 83426711 - MGP_WSBEiJ_P0076969 Htra2 protein_coding protein_coding MGP_WSBEiJ_T0076970.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83423391 83426582 - MGP_WSBEiJ_P0076970 Htra2 protein_coding protein_coding MGP_WSBEiJ_T0076971.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83423405 83426711 - MGP_WSBEiJ_P0076971 Htra2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076972.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83423409 83427413 - Htra2 protein_coding retained_intron MGP_WSBEiJ_T0076973.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83423512 83425826 - MGP_WSBEiJ_P0076973 Htra2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076974.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83423602 83425977 - MGP_WSBEiJ_P0076974 Htra2 protein_coding protein_coding MGP_WSBEiJ_T0076975.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83423611 83425977 - Htra2 protein_coding retained_intron MGP_WSBEiJ_T0076976.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83423890 83426177 - MGP_WSBEiJ_P0076976 Htra2 protein_coding protein_coding MGP_WSBEiJ_T0076977.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83425177 83427305 - Htra2 protein_coding processed_transcript MGP_WSBEiJ_T0076978.1 MGP_WSBEiJ_G0030080.1 mouse_genomes_project 6 83425286 83426025 - Htra2 protein_coding processed_transcript MGP_WSBEiJ_T0077498.1 MGP_WSBEiJ_G0030181.1 mouse_genomes_project 6 89285048 89355096 - MGP_WSBEiJ_P0077498 Kbtbd12 protein_coding protein_coding MGP_WSBEiJ_T0077499.1 MGP_WSBEiJ_G0030181.1 mouse_genomes_project 6 89318403 89322541 - Kbtbd12 protein_coding retained_intron MGP_WSBEiJ_T0077500.1 MGP_WSBEiJ_G0030181.1 mouse_genomes_project 6 89350000 89363705 - Kbtbd12 protein_coding retained_intron MGP_WSBEiJ_T0077501.1 MGP_WSBEiJ_G0030181.1 mouse_genomes_project 6 89350279 89354772 - Kbtbd12 protein_coding processed_transcript MGP_WSBEiJ_T0077502.1 MGP_WSBEiJ_G0030181.1 mouse_genomes_project 6 89353685 89363702 - Kbtbd12 protein_coding retained_intron MGP_WSBEiJ_T0077503.1 MGP_WSBEiJ_G0030181.1 mouse_genomes_project 6 89354866 89375013 - MGP_WSBEiJ_P0077503 Kbtbd12 protein_coding protein_coding MGP_WSBEiJ_T0010585.1 MGP_WSBEiJ_G0008742.1 mouse_genomes_project 6 28173815 28173913 + Mir335 miRNA miRNA MGP_WSBEiJ_T0015056.1 MGP_WSBEiJ_G0013186.1 mouse_genomes_project 6 106901899 106902207 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079208.1 MGP_WSBEiJ_G0030528.1 mouse_genomes_project 6 132365924 132378501 - MGP_WSBEiJ_P0079208 Gm156 protein_coding protein_coding MGP_WSBEiJ_T0079209.1 MGP_WSBEiJ_G0030528.1 mouse_genomes_project 6 132365981 132375213 - MGP_WSBEiJ_P0079209 Gm156 protein_coding protein_coding MGP_WSBEiJ_T0002616.1 MGP_WSBEiJ_G0002507.1 mouse_genomes_project 6 38979467 38979929 + MGP_WSBEiJ_P0002616 Trbv13-1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002617.1 MGP_WSBEiJ_G0002507.1 mouse_genomes_project 6 38979496 38979929 + MGP_WSBEiJ_P0002617 Trbv13-1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0098420.1 MGP_WSBEiJ_G0037083.1 mouse_genomes_project 6 63701091 63701194 + Gm25205 snRNA snRNA MGP_WSBEiJ_T0001900.1 MGP_WSBEiJ_G0001820.1 mouse_genomes_project 6 26898546 26900071 - TEC TEC MGP_WSBEiJ_T0001926.1 MGP_WSBEiJ_G0001846.1 mouse_genomes_project 6 43364144 43366405 + TEC TEC MGP_WSBEiJ_T0002041.1 MGP_WSBEiJ_G0001961.1 mouse_genomes_project 6 92550834 92552510 - TEC TEC MGP_WSBEiJ_T0075102.1 MGP_WSBEiJ_G0029637.1 mouse_genomes_project 6 11594480 11640226 - MGP_WSBEiJ_P0075102 Ppp1r3a protein_coding protein_coding MGP_WSBEiJ_T0075165.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14666729 14800035 + St7 protein_coding retained_intron MGP_WSBEiJ_T0075166.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14667743 14926862 + MGP_WSBEiJ_P0075166 St7 protein_coding protein_coding MGP_WSBEiJ_T0075167.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14667790 14926862 + MGP_WSBEiJ_P0075167 St7 protein_coding protein_coding MGP_WSBEiJ_T0075168.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14667828 14926865 + MGP_WSBEiJ_P0075168 St7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075169.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14667828 14926806 + MGP_WSBEiJ_P0075169 St7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075170.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14667828 14926806 + MGP_WSBEiJ_P0075170 St7 protein_coding protein_coding MGP_WSBEiJ_T0075171.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14667828 14834994 + MGP_WSBEiJ_P0075171 St7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075172.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14667828 14926806 + MGP_WSBEiJ_P0075172 St7 protein_coding protein_coding MGP_WSBEiJ_T0075173.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14667963 14926806 + MGP_WSBEiJ_P0075173 St7 protein_coding protein_coding MGP_WSBEiJ_T0075174.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14721305 14926806 + MGP_WSBEiJ_P0075174 St7 protein_coding protein_coding MGP_WSBEiJ_T0075175.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14721305 14926806 + MGP_WSBEiJ_P0075175 St7 protein_coding protein_coding MGP_WSBEiJ_T0075176.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14727445 14890297 + St7 protein_coding processed_transcript MGP_WSBEiJ_T0075177.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14727445 14926865 + MGP_WSBEiJ_P0075177 St7 protein_coding protein_coding MGP_WSBEiJ_T0075178.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14727491 14926860 + MGP_WSBEiJ_P0075178 St7 protein_coding protein_coding MGP_WSBEiJ_T0075179.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14727571 14816124 + St7 protein_coding retained_intron MGP_WSBEiJ_T0075180.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14727608 14926862 + St7 protein_coding retained_intron MGP_WSBEiJ_T0075181.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14727671 14926841 + St7 protein_coding retained_intron MGP_WSBEiJ_T0075182.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14820594 14828531 + St7 protein_coding processed_transcript MGP_WSBEiJ_T0075183.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14820613 14888724 + St7 protein_coding processed_transcript MGP_WSBEiJ_T0075184.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14834949 14890283 + St7 protein_coding processed_transcript MGP_WSBEiJ_T0075185.1 MGP_WSBEiJ_G0029646.1 mouse_genomes_project 6 14889373 14926775 + St7 protein_coding processed_transcript MGP_WSBEiJ_T0078163.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008595 116237123 + MGP_WSBEiJ_P0078163 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078164.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008610 116237121 + MGP_WSBEiJ_P0078164 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078165.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008614 116051293 + Atg7 protein_coding retained_intron MGP_WSBEiJ_T0078166.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008616 116042727 + MGP_WSBEiJ_P0078166 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078167.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008620 116235608 + MGP_WSBEiJ_P0078167 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078168.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008625 116038437 + MGP_WSBEiJ_P0078168 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078169.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008625 116235699 + MGP_WSBEiJ_P0078169 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078170.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008627 116235702 + MGP_WSBEiJ_P0078170 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078171.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008627 116235708 + MGP_WSBEiJ_P0078171 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078172.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116008629 116052608 + MGP_WSBEiJ_P0078172 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078173.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116014277 116050897 + MGP_WSBEiJ_P0078173 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078174.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116017869 116052591 + MGP_WSBEiJ_P0078174 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078175.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116023364 116039035 + MGP_WSBEiJ_P0078175 Atg7 protein_coding protein_coding MGP_WSBEiJ_T0078176.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116046534 116068266 + Atg7 protein_coding processed_transcript MGP_WSBEiJ_T0078177.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116049663 116051880 + Atg7 protein_coding retained_intron MGP_WSBEiJ_T0078178.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116089355 116235702 + Atg7 protein_coding processed_transcript MGP_WSBEiJ_T0078179.1 MGP_WSBEiJ_G0030313.1 mouse_genomes_project 6 116232628 116235700 + Atg7 protein_coding processed_transcript MGP_WSBEiJ_T0079779.1 MGP_WSBEiJ_G0030665.1 mouse_genomes_project 6 151068786 151080906 - MGP_WSBEiJ_P0079779 Pthlh protein_coding protein_coding MGP_WSBEiJ_T0079780.1 MGP_WSBEiJ_G0030665.1 mouse_genomes_project 6 151068794 151080922 - MGP_WSBEiJ_P0079780 Pthlh protein_coding protein_coding MGP_WSBEiJ_T0002021.1 MGP_WSBEiJ_G0001941.1 mouse_genomes_project 6 88538835 88541428 - TEC TEC MGP_WSBEiJ_T0015139.1 MGP_WSBEiJ_G0013269.1 mouse_genomes_project 6 131362202 131362901 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004965.1 MGP_WSBEiJ_G0004238.1 mouse_genomes_project 6 100908700 100916342 + Gm26748 antisense antisense MGP_WSBEiJ_T0008471.1 MGP_WSBEiJ_G0006852.1 mouse_genomes_project 6 50992889 51000523 + 1700094M24Rik lincRNA lincRNA MGP_WSBEiJ_T0014929.1 MGP_WSBEiJ_G0013059.1 mouse_genomes_project 6 64458299 64458528 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099700.1 MGP_WSBEiJ_G0038363.1 mouse_genomes_project 6 152839831 152839953 + Gm25539 snoRNA snoRNA MGP_WSBEiJ_T0077900.1 MGP_WSBEiJ_G0030265.1 mouse_genomes_project 6 108121008 108161216 - MGP_WSBEiJ_P0077900 Il5ra protein_coding protein_coding MGP_WSBEiJ_T0077901.1 MGP_WSBEiJ_G0030265.1 mouse_genomes_project 6 108121258 108161127 - MGP_WSBEiJ_P0077901 Il5ra protein_coding protein_coding MGP_WSBEiJ_T0077902.1 MGP_WSBEiJ_G0030265.1 mouse_genomes_project 6 108122627 108157308 - MGP_WSBEiJ_P0077902 Il5ra protein_coding protein_coding MGP_WSBEiJ_T0076844.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72538114 72559749 + MGP_WSBEiJ_P0076844 Capg protein_coding protein_coding MGP_WSBEiJ_T0076845.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72538260 72559747 + MGP_WSBEiJ_P0076845 Capg protein_coding protein_coding MGP_WSBEiJ_T0076846.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72539492 72551955 + MGP_WSBEiJ_P0076846 Capg protein_coding protein_coding MGP_WSBEiJ_T0076847.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72543653 72553472 + MGP_WSBEiJ_P0076847 Capg protein_coding protein_coding MGP_WSBEiJ_T0076848.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72544986 72559749 + MGP_WSBEiJ_P0076848 Capg protein_coding protein_coding MGP_WSBEiJ_T0076849.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72545145 72553443 + Capg protein_coding retained_intron MGP_WSBEiJ_T0076850.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72545164 72551569 + MGP_WSBEiJ_P0076850 Capg protein_coding protein_coding MGP_WSBEiJ_T0076851.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72545171 72551338 + Capg protein_coding retained_intron MGP_WSBEiJ_T0076852.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72545365 72551527 + MGP_WSBEiJ_P0076852 Capg protein_coding protein_coding MGP_WSBEiJ_T0076853.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72548650 72553959 + MGP_WSBEiJ_P0076853 Capg protein_coding protein_coding MGP_WSBEiJ_T0076854.1 MGP_WSBEiJ_G0030050.1 mouse_genomes_project 6 72551681 72553549 + Capg protein_coding retained_intron MGP_WSBEiJ_T0079692.1 MGP_WSBEiJ_G0030648.1 mouse_genomes_project 6 149669146 149676481 - MGP_WSBEiJ_P0079692 Bhlhe41 protein_coding protein_coding MGP_WSBEiJ_T0079693.1 MGP_WSBEiJ_G0030648.1 mouse_genomes_project 6 149674427 149676225 - MGP_WSBEiJ_P0079693 Bhlhe41 protein_coding protein_coding MGP_WSBEiJ_T0079694.1 MGP_WSBEiJ_G0030648.1 mouse_genomes_project 6 149675585 149676275 - Bhlhe41 protein_coding retained_intron MGP_WSBEiJ_T0097449.1 MGP_WSBEiJ_G0036119.1 mouse_genomes_project 6 127320505 127320786 - Gm28967 sense_intronic sense_intronic MGP_WSBEiJ_T0077413.1 MGP_WSBEiJ_G0030165.1 mouse_genomes_project 6 88437826 88440953 + Efcc1 protein_coding retained_intron MGP_WSBEiJ_T0077414.1 MGP_WSBEiJ_G0030165.1 mouse_genomes_project 6 88437826 88462408 + MGP_WSBEiJ_P0077414 Efcc1 protein_coding protein_coding MGP_WSBEiJ_T0077415.1 MGP_WSBEiJ_G0030165.1 mouse_genomes_project 6 88437850 88463225 + MGP_WSBEiJ_P0077415 Efcc1 protein_coding protein_coding MGP_WSBEiJ_T0077416.1 MGP_WSBEiJ_G0030165.1 mouse_genomes_project 6 88439768 88458845 + Efcc1 protein_coding processed_transcript MGP_WSBEiJ_T0077417.1 MGP_WSBEiJ_G0030165.1 mouse_genomes_project 6 88460478 88461719 + Efcc1 protein_coding retained_intron MGP_WSBEiJ_T0008633.1 MGP_WSBEiJ_G0006979.1 mouse_genomes_project 6 149072536 149078172 + 2010013B24Rik lincRNA lincRNA MGP_WSBEiJ_T0008630.1 MGP_WSBEiJ_G0006976.1 mouse_genomes_project 6 147227973 147229522 - 4930579D09Rik lincRNA lincRNA MGP_WSBEiJ_T0015176.1 MGP_WSBEiJ_G0013306.1 mouse_genomes_project 6 143626604 143627793 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001991.1 MGP_WSBEiJ_G0001911.1 mouse_genomes_project 6 80584129 80585893 + TEC TEC MGP_WSBEiJ_T0004964.1 MGP_WSBEiJ_G0004237.1 mouse_genomes_project 6 99234440 99364202 + Gm32592 antisense antisense MGP_WSBEiJ_T0077352.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87396942 87429575 - MGP_WSBEiJ_P0077352 Anxa4 protein_coding protein_coding MGP_WSBEiJ_T0077353.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87396943 87457514 - MGP_WSBEiJ_P0077353 Anxa4 protein_coding protein_coding MGP_WSBEiJ_T0077354.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87396949 87429489 - MGP_WSBEiJ_P0077354 Anxa4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077355.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87397757 87405156 - Anxa4 protein_coding retained_intron MGP_WSBEiJ_T0077356.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87397830 87422069 - MGP_WSBEiJ_P0077356 Anxa4 protein_coding protein_coding MGP_WSBEiJ_T0077357.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87397866 87457470 - MGP_WSBEiJ_P0077357 Anxa4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0077358.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87402010 87429472 - MGP_WSBEiJ_P0077358 Anxa4 protein_coding protein_coding MGP_WSBEiJ_T0077359.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87402017 87457494 - MGP_WSBEiJ_P0077359 Anxa4 protein_coding protein_coding MGP_WSBEiJ_T0077360.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87403222 87457494 - MGP_WSBEiJ_P0077360 Anxa4 protein_coding protein_coding MGP_WSBEiJ_T0077361.1 MGP_WSBEiJ_G0030152.1 mouse_genomes_project 6 87408054 87429575 - Anxa4 protein_coding retained_intron MGP_WSBEiJ_T0001897.1 MGP_WSBEiJ_G0001817.1 mouse_genomes_project 6 25867425 25869297 + TEC TEC MGP_WSBEiJ_T0076888.1 MGP_WSBEiJ_G0030059.1 mouse_genomes_project 6 73500549 73501644 - MGP_WSBEiJ_P0076888 4931417E11Rik protein_coding protein_coding MGP_WSBEiJ_T0076889.1 MGP_WSBEiJ_G0030059.1 mouse_genomes_project 6 73500557 73501596 - 4931417E11Rik protein_coding processed_transcript MGP_WSBEiJ_T0076890.1 MGP_WSBEiJ_G0030059.1 mouse_genomes_project 6 73500623 73501541 - 4931417E11Rik protein_coding transcribed_processed_pseudogene MGP_WSBEiJ_T0017704.1 MGP_WSBEiJ_G0015065.1 mouse_genomes_project 6 117803830 117807736 - Gm44957 processed_transcript retained_intron MGP_WSBEiJ_T0017705.1 MGP_WSBEiJ_G0015065.1 mouse_genomes_project 6 117803845 117808223 - Gm44957 processed_transcript bidirectional_promoter_lncRNA MGP_WSBEiJ_T0015196.1 MGP_WSBEiJ_G0013326.1 mouse_genomes_project 6 152956610 152957545 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014898.1 MGP_WSBEiJ_G0013028.1 mouse_genomes_project 6 51566462 51567002 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014845.1 MGP_WSBEiJ_G0012975.1 mouse_genomes_project 6 35969035 35969459 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077583.1 MGP_WSBEiJ_G0030197.1 mouse_genomes_project 6 90730103 90737909 + MGP_WSBEiJ_P0077583 Vmn1r46 protein_coding protein_coding MGP_WSBEiJ_T0077584.1 MGP_WSBEiJ_G0030197.1 mouse_genomes_project 6 90736952 90737882 + MGP_WSBEiJ_P0077584 Vmn1r46 protein_coding protein_coding MGP_WSBEiJ_T0097079.1 MGP_WSBEiJ_G0035760.1 mouse_genomes_project 6 20828943 20829076 - Gm24217 rRNA rRNA MGP_WSBEiJ_T0097452.1 MGP_WSBEiJ_G0036122.1 mouse_genomes_project 6 138151314 138154757 - Gm44366 sense_intronic sense_intronic MGP_WSBEiJ_T0008510.1 MGP_WSBEiJ_G0006886.1 mouse_genomes_project 6 83241520 83245976 - 2310069B03Rik lincRNA lincRNA MGP_WSBEiJ_T0008511.1 MGP_WSBEiJ_G0006886.1 mouse_genomes_project 6 83242183 83245976 - 2310069B03Rik lincRNA lincRNA MGP_WSBEiJ_T0008512.1 MGP_WSBEiJ_G0006886.1 mouse_genomes_project 6 83243076 83245955 - 2310069B03Rik lincRNA lincRNA MGP_WSBEiJ_T0005035.1 MGP_WSBEiJ_G0004294.1 mouse_genomes_project 6 144899179 144902173 - Gm28523 antisense antisense MGP_WSBEiJ_T0015073.1 MGP_WSBEiJ_G0013203.1 mouse_genomes_project 6 114428292 114428767 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076157.1 MGP_WSBEiJ_G0029878.1 mouse_genomes_project 6 46879267 46886188 + MGP_WSBEiJ_P0076157 AI854703 protein_coding protein_coding MGP_WSBEiJ_T0076158.1 MGP_WSBEiJ_G0029878.1 mouse_genomes_project 6 46879726 46881967 + MGP_WSBEiJ_P0076158 AI854703 protein_coding protein_coding MGP_WSBEiJ_T0076159.1 MGP_WSBEiJ_G0029878.1 mouse_genomes_project 6 46879784 46881967 + MGP_WSBEiJ_P0076159 AI854703 protein_coding protein_coding MGP_WSBEiJ_T0076160.1 MGP_WSBEiJ_G0029878.1 mouse_genomes_project 6 46880438 46886192 + MGP_WSBEiJ_P0076160 AI854703 protein_coding protein_coding MGP_WSBEiJ_T0100951.1 MGP_WSBEiJ_G0039408.1 mouse_genomes_project 6 136260003 136260948 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079232.1 MGP_WSBEiJ_G0030536.1 mouse_genomes_project 6 134605566 134606598 - MGP_WSBEiJ_P0079232 Tas2r107 protein_coding protein_coding MGP_WSBEiJ_T0078729.1 MGP_WSBEiJ_G0030422.1 mouse_genomes_project 6 126621793 126661755 + MGP_WSBEiJ_P0078729 C1ra protein_coding protein_coding MGP_WSBEiJ_T0004942.1 MGP_WSBEiJ_G0004224.1 mouse_genomes_project 6 88690777 88694072 + Gm5577 antisense antisense MGP_WSBEiJ_T0004943.1 MGP_WSBEiJ_G0004224.1 mouse_genomes_project 6 88691580 88694064 + Gm5577 antisense antisense MGP_WSBEiJ_T0004944.1 MGP_WSBEiJ_G0004224.1 mouse_genomes_project 6 88691580 88715680 + Gm5577 antisense antisense MGP_WSBEiJ_T0010606.1 MGP_WSBEiJ_G0008763.1 mouse_genomes_project 6 83464606 83464683 - Mir3470a miRNA miRNA MGP_WSBEiJ_T0077340.1 MGP_WSBEiJ_G0030149.1 mouse_genomes_project 6 87306426 87328076 - MGP_WSBEiJ_P0077340 Mxd1 protein_coding protein_coding MGP_WSBEiJ_T0077341.1 MGP_WSBEiJ_G0030149.1 mouse_genomes_project 6 87308400 87322020 - MGP_WSBEiJ_P0077341 Mxd1 protein_coding protein_coding MGP_WSBEiJ_T0077342.1 MGP_WSBEiJ_G0030149.1 mouse_genomes_project 6 87310184 87328015 - MGP_WSBEiJ_P0077342 Mxd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077343.1 MGP_WSBEiJ_G0030149.1 mouse_genomes_project 6 87325116 87328032 - Mxd1 protein_coding retained_intron MGP_WSBEiJ_T0004926.1 MGP_WSBEiJ_G0004216.1 mouse_genomes_project 6 86699308 86702020 - Gm44089 antisense antisense MGP_WSBEiJ_T0002074.1 MGP_WSBEiJ_G0001994.1 mouse_genomes_project 6 113710090 113712616 + TEC TEC MGP_WSBEiJ_T0100941.1 MGP_WSBEiJ_G0039398.1 mouse_genomes_project 6 135027811 135177966 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0076637.1 MGP_WSBEiJ_G0030006.1 mouse_genomes_project 6 65068979 65235581 + MGP_WSBEiJ_P0076637 Prdm5 protein_coding protein_coding MGP_WSBEiJ_T0076638.1 MGP_WSBEiJ_G0030006.1 mouse_genomes_project 6 65069013 65129029 + Prdm5 protein_coding retained_intron MGP_WSBEiJ_T0076639.1 MGP_WSBEiJ_G0030006.1 mouse_genomes_project 6 65069013 65235578 + MGP_WSBEiJ_P0076639 Prdm5 protein_coding protein_coding MGP_WSBEiJ_T0076640.1 MGP_WSBEiJ_G0030006.1 mouse_genomes_project 6 65069016 65235503 + MGP_WSBEiJ_P0076640 Prdm5 protein_coding protein_coding MGP_WSBEiJ_T0076641.1 MGP_WSBEiJ_G0030006.1 mouse_genomes_project 6 65069085 65074253 + Prdm5 protein_coding retained_intron MGP_WSBEiJ_T0076642.1 MGP_WSBEiJ_G0030006.1 mouse_genomes_project 6 65069152 65235339 + MGP_WSBEiJ_P0076642 Prdm5 protein_coding protein_coding MGP_WSBEiJ_T0076643.1 MGP_WSBEiJ_G0030006.1 mouse_genomes_project 6 65234295 65236215 + Prdm5 protein_coding retained_intron MGP_WSBEiJ_T0097444.1 MGP_WSBEiJ_G0036114.1 mouse_genomes_project 6 89079113 89079578 - Gm44265 sense_intronic sense_intronic MGP_WSBEiJ_T0000158.1 MGP_WSBEiJ_G0000120.1 mouse_genomes_project 6 67783997 67784829 + MGP_WSBEiJ_P0000158 Igkv2-112 IG_V_gene IG_V_gene MGP_WSBEiJ_T0015047.1 MGP_WSBEiJ_G0013177.1 mouse_genomes_project 6 102414386 102414626 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010591.1 MGP_WSBEiJ_G0008748.1 mouse_genomes_project 6 36211688 36211757 + Mir7670 miRNA miRNA MGP_WSBEiJ_T0010572.1 MGP_WSBEiJ_G0008729.1 mouse_genomes_project 6 422118 422225 - Mir489 miRNA miRNA MGP_WSBEiJ_T0001909.1 MGP_WSBEiJ_G0001829.1 mouse_genomes_project 6 32428389 32429620 + TEC TEC MGP_WSBEiJ_T0075998.1 MGP_WSBEiJ_G0029832.1 mouse_genomes_project 6 40501949 40502903 - MGP_WSBEiJ_P0075998 Olfr455 protein_coding protein_coding MGP_WSBEiJ_T0002611.1 MGP_WSBEiJ_G0002502.1 mouse_genomes_project 6 38908727 38909383 + MGP_WSBEiJ_P0002611 Trbv2 TR_V_gene TR_V_gene MGP_WSBEiJ_T0079458.1 MGP_WSBEiJ_G0030605.1 mouse_genomes_project 6 141631631 141651977 + MGP_WSBEiJ_P0079458 Mgst1 protein_coding protein_coding MGP_WSBEiJ_T0079459.1 MGP_WSBEiJ_G0030605.1 mouse_genomes_project 6 141631843 141651827 + MGP_WSBEiJ_P0079459 Mgst1 protein_coding protein_coding MGP_WSBEiJ_T0079460.1 MGP_WSBEiJ_G0030605.1 mouse_genomes_project 6 141631869 141651614 + MGP_WSBEiJ_P0079460 Mgst1 protein_coding protein_coding MGP_WSBEiJ_T0079461.1 MGP_WSBEiJ_G0030605.1 mouse_genomes_project 6 141631886 141651964 + MGP_WSBEiJ_P0079461 Mgst1 protein_coding protein_coding MGP_WSBEiJ_T0079462.1 MGP_WSBEiJ_G0030605.1 mouse_genomes_project 6 141631914 141651606 + MGP_WSBEiJ_P0079462 Mgst1 protein_coding protein_coding MGP_WSBEiJ_T0079463.1 MGP_WSBEiJ_G0030605.1 mouse_genomes_project 6 141632681 141651781 + MGP_WSBEiJ_P0079463 Mgst1 protein_coding protein_coding MGP_WSBEiJ_T0079464.1 MGP_WSBEiJ_G0030605.1 mouse_genomes_project 6 141632897 141651834 + MGP_WSBEiJ_P0079464 Mgst1 protein_coding protein_coding MGP_WSBEiJ_T0079465.1 MGP_WSBEiJ_G0030605.1 mouse_genomes_project 6 141634168 141644402 + MGP_WSBEiJ_P0079465 Mgst1 protein_coding protein_coding MGP_WSBEiJ_T0075381.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26695176 26722172 + MGP_WSBEiJ_P0075381 Calu protein_coding protein_coding MGP_WSBEiJ_T0075382.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26695176 26722172 + MGP_WSBEiJ_P0075382 Calu protein_coding protein_coding MGP_WSBEiJ_T0075383.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26695213 26724344 + MGP_WSBEiJ_P0075383 Calu protein_coding protein_coding MGP_WSBEiJ_T0075384.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26695226 26723798 + MGP_WSBEiJ_P0075384 Calu protein_coding protein_coding MGP_WSBEiJ_T0075385.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26695232 26724345 + MGP_WSBEiJ_P0075385 Calu protein_coding protein_coding MGP_WSBEiJ_T0075386.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26703591 26722694 + MGP_WSBEiJ_P0075386 Calu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075387.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26708581 26721006 + MGP_WSBEiJ_P0075387 Calu protein_coding protein_coding MGP_WSBEiJ_T0075388.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26720210 26724779 + MGP_WSBEiJ_P0075388 Calu protein_coding protein_coding MGP_WSBEiJ_T0075389.1 MGP_WSBEiJ_G0029694.1 mouse_genomes_project 6 26721319 26722700 + Calu protein_coding processed_transcript MGP_WSBEiJ_T0077998.1 MGP_WSBEiJ_G0030284.1 mouse_genomes_project 6 114618347 114645790 - MGP_WSBEiJ_P0077998 Lhfpl4 protein_coding protein_coding MGP_WSBEiJ_T0077999.1 MGP_WSBEiJ_G0030284.1 mouse_genomes_project 6 114626112 114644422 - MGP_WSBEiJ_P0077999 Lhfpl4 protein_coding protein_coding MGP_WSBEiJ_T0002140.1 MGP_WSBEiJ_G0002059.1 mouse_genomes_project 6 151358292 151362137 - TEC TEC MGP_WSBEiJ_T0017639.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648528 28772571 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017640.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648528 28772445 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017641.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648528 28772602 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017642.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648534 28772590 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017643.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648582 28772575 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017644.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648582 28772583 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017645.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648599 28762653 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017646.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648599 28772508 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017647.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648612 28772595 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017648.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648618 28772571 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017649.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28648624 28772598 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017650.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28710192 28726058 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017651.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28717091 28772601 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0017652.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28725372 28726504 + 2210408F21Rik processed_transcript TEC MGP_WSBEiJ_T0017653.1 MGP_WSBEiJ_G0015046.1 mouse_genomes_project 6 28756324 28772583 + 2210408F21Rik processed_transcript lincRNA MGP_WSBEiJ_T0000194.1 MGP_WSBEiJ_G0000145.1 mouse_genomes_project 6 69802313 69802894 - MGP_WSBEiJ_P0000194 Igkv6-32 IG_V_gene IG_V_gene MGP_WSBEiJ_T0079861.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153204523 153222309 + MGP_WSBEiJ_P0079861 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0079862.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153204537 153232013 + MGP_WSBEiJ_P0079862 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0079863.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153204565 153224615 + MGP_WSBEiJ_P0079863 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0079864.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153204583 153231254 + MGP_WSBEiJ_P0079864 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0079865.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153204583 153231254 + MGP_WSBEiJ_P0079865 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0079866.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153204682 153205565 + 2810474O19Rik protein_coding retained_intron MGP_WSBEiJ_T0079867.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153204837 153221127 + MGP_WSBEiJ_P0079867 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0079868.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153206525 153209466 + 2810474O19Rik protein_coding retained_intron MGP_WSBEiJ_T0079869.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153212432 153221605 + MGP_WSBEiJ_P0079869 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0079870.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153220294 153221411 + MGP_WSBEiJ_P0079870 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0079871.1 MGP_WSBEiJ_G0030677.1 mouse_genomes_project 6 153221095 153232008 + MGP_WSBEiJ_P0079871 2810474O19Rik protein_coding protein_coding MGP_WSBEiJ_T0008522.1 MGP_WSBEiJ_G0006895.1 mouse_genomes_project 6 87393592 87397168 + Gm44036 lincRNA lincRNA MGP_WSBEiJ_T0099690.1 MGP_WSBEiJ_G0038353.1 mouse_genomes_project 6 127320503 127320828 - Scarna10 snoRNA snoRNA MGP_WSBEiJ_T0075323.1 MGP_WSBEiJ_G0029681.1 mouse_genomes_project 6 25710551 25716186 - MGP_WSBEiJ_P0075323 Gcc1 protein_coding protein_coding MGP_WSBEiJ_T0075324.1 MGP_WSBEiJ_G0029681.1 mouse_genomes_project 6 25712288 25725234 - MGP_WSBEiJ_P0075324 Gcc1 protein_coding protein_coding MGP_WSBEiJ_T0075325.1 MGP_WSBEiJ_G0029681.1 mouse_genomes_project 6 25714121 25715320 - MGP_WSBEiJ_P0075325 Gcc1 protein_coding protein_coding MGP_WSBEiJ_T0075326.1 MGP_WSBEiJ_G0029681.1 mouse_genomes_project 6 25715741 25721017 - MGP_WSBEiJ_P0075326 Gcc1 protein_coding protein_coding MGP_WSBEiJ_T0000154.1 MGP_WSBEiJ_G0000117.1 mouse_genomes_project 6 67393091 67393565 - MGP_WSBEiJ_P0000154 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000155.1 MGP_WSBEiJ_G0000117.1 mouse_genomes_project 6 67393091 67393565 - MGP_WSBEiJ_P0000155 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000156.1 MGP_WSBEiJ_G0000118.1 mouse_genomes_project 6 67487235 67487548 + MGP_WSBEiJ_P0000156 Igkv1-122 IG_V_gene IG_V_gene MGP_WSBEiJ_T0075995.1 MGP_WSBEiJ_G0029829.1 mouse_genomes_project 6 40415662 40455230 - MGP_WSBEiJ_P0075995 Olfr458 protein_coding protein_coding MGP_WSBEiJ_T0002003.1 MGP_WSBEiJ_G0001923.1 mouse_genomes_project 6 86180691 86182972 + TEC TEC MGP_WSBEiJ_T0100899.1 MGP_WSBEiJ_G0039357.1 mouse_genomes_project 6 55938615 55939453 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005001.1 MGP_WSBEiJ_G0004266.1 mouse_genomes_project 6 126832934 126838837 + Gm20531 antisense antisense MGP_WSBEiJ_T0008469.1 MGP_WSBEiJ_G0006851.1 mouse_genomes_project 6 50752224 50757050 + Hottip lincRNA lincRNA MGP_WSBEiJ_T0008470.1 MGP_WSBEiJ_G0006851.1 mouse_genomes_project 6 50752233 50756526 + Hottip lincRNA lincRNA MGP_WSBEiJ_T0015046.1 MGP_WSBEiJ_G0013176.1 mouse_genomes_project 6 102221893 102223486 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075301.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 22966770 23033085 - MGP_WSBEiJ_P0075301 Pot1a protein_coding protein_coding MGP_WSBEiJ_T0075302.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 22967534 22969182 - Pot1a protein_coding retained_intron MGP_WSBEiJ_T0075303.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 22967614 23021894 - MGP_WSBEiJ_P0075303 Pot1a protein_coding protein_coding MGP_WSBEiJ_T0075304.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 22972380 23033085 - Pot1a protein_coding retained_intron MGP_WSBEiJ_T0075305.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 22982316 23033053 - MGP_WSBEiJ_P0075305 Pot1a protein_coding protein_coding MGP_WSBEiJ_T0075306.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 23000318 23033081 - Pot1a protein_coding processed_transcript MGP_WSBEiJ_T0075307.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 23015668 23033105 - Pot1a protein_coding retained_intron MGP_WSBEiJ_T0075308.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 23022410 23033075 - Pot1a protein_coding retained_intron MGP_WSBEiJ_T0075309.1 MGP_WSBEiJ_G0029678.1 mouse_genomes_project 6 23024200 23025270 - Pot1a protein_coding processed_transcript MGP_WSBEiJ_T0096834.1 MGP_WSBEiJ_G0035515.1 mouse_genomes_project 6 3537563 3538741 - pseudogene pseudogene MGP_WSBEiJ_T0079515.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144254216 144313443 + MGP_WSBEiJ_P0079515 Aebp2 protein_coding protein_coding MGP_WSBEiJ_T0079516.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144254222 144287316 + MGP_WSBEiJ_P0079516 Aebp2 protein_coding protein_coding MGP_WSBEiJ_T0079517.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144254825 144312422 + MGP_WSBEiJ_P0079517 Aebp2 protein_coding protein_coding MGP_WSBEiJ_T0079518.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144255439 144285239 + MGP_WSBEiJ_P0079518 Aebp2 protein_coding protein_coding MGP_WSBEiJ_T0079519.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144257371 144286320 + MGP_WSBEiJ_P0079519 Aebp2 protein_coding protein_coding MGP_WSBEiJ_T0079520.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144267221 144268604 + Aebp2 protein_coding retained_intron MGP_WSBEiJ_T0079521.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144268187 144287905 + MGP_WSBEiJ_P0079521 Aebp2 protein_coding protein_coding MGP_WSBEiJ_T0079522.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144274396 144285525 + Aebp2 protein_coding processed_transcript MGP_WSBEiJ_T0079523.1 MGP_WSBEiJ_G0030614.1 mouse_genomes_project 6 144280402 144281889 + Aebp2 protein_coding processed_transcript MGP_WSBEiJ_T0078301.1 MGP_WSBEiJ_G0030335.1 mouse_genomes_project 6 117727952 117797004 + MGP_WSBEiJ_P0078301 Zfand4 protein_coding protein_coding MGP_WSBEiJ_T0014837.1 MGP_WSBEiJ_G0012967.1 mouse_genomes_project 6 30872132 30874239 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002620.1 MGP_WSBEiJ_G0002510.1 mouse_genomes_project 6 38994041 38994480 + MGP_WSBEiJ_P0002620 Trbv13-3 TR_V_gene TR_V_gene MGP_WSBEiJ_T0011427.1 MGP_WSBEiJ_G0009584.1 mouse_genomes_project 6 14669150 14669327 + Gm27365 misc_RNA misc_RNA MGP_WSBEiJ_T0077947.1 MGP_WSBEiJ_G0030275.1 mouse_genomes_project 6 112124700 112894339 + MGP_WSBEiJ_P0077947 Grm7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077948.1 MGP_WSBEiJ_G0030275.1 mouse_genomes_project 6 112124700 112967851 + MGP_WSBEiJ_P0077948 Grm7 protein_coding protein_coding MGP_WSBEiJ_T0077949.1 MGP_WSBEiJ_G0030275.1 mouse_genomes_project 6 112124701 112969014 + MGP_WSBEiJ_P0077949 Grm7 protein_coding protein_coding MGP_WSBEiJ_T0077950.1 MGP_WSBEiJ_G0030275.1 mouse_genomes_project 6 112892964 112898262 + MGP_WSBEiJ_P0077950 Grm7 protein_coding protein_coding MGP_WSBEiJ_T0077951.1 MGP_WSBEiJ_G0030275.1 mouse_genomes_project 6 112892993 112900613 + MGP_WSBEiJ_P0077951 Grm7 protein_coding protein_coding MGP_WSBEiJ_T0078203.1 MGP_WSBEiJ_G0030318.1 mouse_genomes_project 6 116637936 116648243 - MGP_WSBEiJ_P0078203 Timp4 protein_coding protein_coding MGP_WSBEiJ_T0078204.1 MGP_WSBEiJ_G0030318.1 mouse_genomes_project 6 116642868 116647889 - MGP_WSBEiJ_P0078204 Timp4 protein_coding protein_coding MGP_WSBEiJ_T0004970.1 MGP_WSBEiJ_G0004241.1 mouse_genomes_project 6 103555500 103596777 + Gm44188 antisense antisense MGP_WSBEiJ_T0004971.1 MGP_WSBEiJ_G0004241.1 mouse_genomes_project 6 103555522 103626482 + Gm44188 antisense antisense MGP_WSBEiJ_T0001917.1 MGP_WSBEiJ_G0001837.1 mouse_genomes_project 6 41292863 41293491 + TEC TEC MGP_WSBEiJ_T0004849.1 MGP_WSBEiJ_G0004162.1 mouse_genomes_project 6 32286320 32286555 - Npn2 antisense antisense MGP_WSBEiJ_T0004850.1 MGP_WSBEiJ_G0004162.1 mouse_genomes_project 6 32286479 32286554 - Npn2 antisense antisense MGP_WSBEiJ_T0017712.1 MGP_WSBEiJ_G0015069.1 mouse_genomes_project 6 127404690 127429089 + processed_transcript antisense MGP_WSBEiJ_T0017713.1 MGP_WSBEiJ_G0015069.1 mouse_genomes_project 6 127404739 127405743 + processed_transcript retained_intron MGP_WSBEiJ_T0017714.1 MGP_WSBEiJ_G0015069.1 mouse_genomes_project 6 127404759 127411548 + processed_transcript antisense MGP_WSBEiJ_T0017715.1 MGP_WSBEiJ_G0015069.1 mouse_genomes_project 6 127404833 127414547 + processed_transcript antisense MGP_WSBEiJ_T0077942.1 MGP_WSBEiJ_G0030274.1 mouse_genomes_project 6 110267668 110302397 + MGP_WSBEiJ_P0077942 Edem1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077943.1 MGP_WSBEiJ_G0030274.1 mouse_genomes_project 6 110267701 110302389 + MGP_WSBEiJ_P0077943 Edem1 protein_coding protein_coding MGP_WSBEiJ_T0077944.1 MGP_WSBEiJ_G0030274.1 mouse_genomes_project 6 110276711 110283972 + Edem1 protein_coding processed_transcript MGP_WSBEiJ_T0077945.1 MGP_WSBEiJ_G0030274.1 mouse_genomes_project 6 110289435 110293040 + Edem1 protein_coding retained_intron MGP_WSBEiJ_T0077946.1 MGP_WSBEiJ_G0030274.1 mouse_genomes_project 6 110293788 110298571 + Edem1 protein_coding retained_intron MGP_WSBEiJ_T0008555.1 MGP_WSBEiJ_G0006920.1 mouse_genomes_project 6 103044629 103068703 + Gm9871 lincRNA lincRNA MGP_WSBEiJ_T0008556.1 MGP_WSBEiJ_G0006920.1 mouse_genomes_project 6 103054301 103068536 + Gm9871 lincRNA lincRNA MGP_WSBEiJ_T0008557.1 MGP_WSBEiJ_G0006920.1 mouse_genomes_project 6 103062945 103068331 + Gm9871 lincRNA lincRNA MGP_WSBEiJ_T0010595.1 MGP_WSBEiJ_G0008752.1 mouse_genomes_project 6 48925150 48925261 + Mir6371 miRNA miRNA MGP_WSBEiJ_T0005044.1 MGP_WSBEiJ_G0004302.1 mouse_genomes_project 6 148801613 148804488 + Gm26666 antisense antisense MGP_WSBEiJ_T0075158.1 MGP_WSBEiJ_G0029645.1 mouse_genomes_project 6 14608320 14629766 + Capza2 protein_coding processed_transcript MGP_WSBEiJ_T0075159.1 MGP_WSBEiJ_G0029645.1 mouse_genomes_project 6 14609069 14640291 + MGP_WSBEiJ_P0075159 Capza2 protein_coding protein_coding MGP_WSBEiJ_T0075160.1 MGP_WSBEiJ_G0029645.1 mouse_genomes_project 6 14609121 14632928 + Capza2 protein_coding retained_intron MGP_WSBEiJ_T0075161.1 MGP_WSBEiJ_G0029645.1 mouse_genomes_project 6 14609128 14629716 + Capza2 protein_coding processed_transcript MGP_WSBEiJ_T0075162.1 MGP_WSBEiJ_G0029645.1 mouse_genomes_project 6 14609196 14638907 + MGP_WSBEiJ_P0075162 Capza2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075163.1 MGP_WSBEiJ_G0029645.1 mouse_genomes_project 6 14609199 14634129 + MGP_WSBEiJ_P0075163 Capza2 protein_coding protein_coding MGP_WSBEiJ_T0075164.1 MGP_WSBEiJ_G0029645.1 mouse_genomes_project 6 14633924 14639005 + Capza2 protein_coding retained_intron MGP_WSBEiJ_T0008568.1 MGP_WSBEiJ_G0006931.1 mouse_genomes_project 6 116946259 116955108 - Gm44082 lincRNA lincRNA MGP_WSBEiJ_T0004822.1 MGP_WSBEiJ_G0004142.1 mouse_genomes_project 6 5159953 5175645 - Gm16055 antisense antisense MGP_WSBEiJ_T0008500.1 MGP_WSBEiJ_G0006879.1 mouse_genomes_project 6 76079627 76086427 - Gm44113 lincRNA lincRNA MGP_WSBEiJ_T0004889.1 MGP_WSBEiJ_G0004192.1 mouse_genomes_project 6 62593418 62597275 - Gm44071 antisense antisense MGP_WSBEiJ_T0005054.1 MGP_WSBEiJ_G0004311.1 mouse_genomes_project 6 152819626 152821885 + 3010003L21Rik antisense antisense MGP_WSBEiJ_T0005055.1 MGP_WSBEiJ_G0004311.1 mouse_genomes_project 6 152819626 152821877 + 3010003L21Rik antisense antisense MGP_WSBEiJ_T0076953.1 MGP_WSBEiJ_G0030076.1 mouse_genomes_project 6 83279040 83307439 - MGP_WSBEiJ_P0076953 Sema4f protein_coding protein_coding MGP_WSBEiJ_T0076954.1 MGP_WSBEiJ_G0030076.1 mouse_genomes_project 6 83281241 83284539 - Sema4f protein_coding processed_transcript MGP_WSBEiJ_T0076955.1 MGP_WSBEiJ_G0030076.1 mouse_genomes_project 6 83283167 83307439 - Sema4f protein_coding retained_intron MGP_WSBEiJ_T0076956.1 MGP_WSBEiJ_G0030076.1 mouse_genomes_project 6 83285554 83307215 - MGP_WSBEiJ_P0076956 Sema4f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077973.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114487657 114510366 + MGP_WSBEiJ_P0077973 Thumpd3 protein_coding protein_coding MGP_WSBEiJ_T0077974.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114487734 114497997 + MGP_WSBEiJ_P0077974 Thumpd3 protein_coding protein_coding MGP_WSBEiJ_T0077975.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114487747 114502890 + Thumpd3 protein_coding retained_intron MGP_WSBEiJ_T0077976.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114487759 114490975 + Thumpd3 protein_coding retained_intron MGP_WSBEiJ_T0077977.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114487789 114489451 + Thumpd3 protein_coding retained_intron MGP_WSBEiJ_T0077978.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114487890 114489111 + MGP_WSBEiJ_P0077978 Thumpd3 protein_coding protein_coding MGP_WSBEiJ_T0077979.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114488187 114489137 + MGP_WSBEiJ_P0077979 Thumpd3 protein_coding protein_coding MGP_WSBEiJ_T0077980.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114488847 114493272 + Thumpd3 protein_coding processed_transcript MGP_WSBEiJ_T0077981.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114499998 114503114 + Thumpd3 protein_coding retained_intron MGP_WSBEiJ_T0077982.1 MGP_WSBEiJ_G0030282.1 mouse_genomes_project 6 114507518 114509989 + Thumpd3 protein_coding retained_intron MGP_WSBEiJ_T0017710.1 MGP_WSBEiJ_G0015068.1 mouse_genomes_project 6 127157659 127169838 + Gm44597 processed_transcript retained_intron MGP_WSBEiJ_T0017711.1 MGP_WSBEiJ_G0015068.1 mouse_genomes_project 6 127157688 127169795 + Gm44597 processed_transcript retained_intron MGP_WSBEiJ_T0075003.1 MGP_WSBEiJ_G0029615.1 mouse_genomes_project 6 3690986 3695271 - MGP_WSBEiJ_P0075003 Dlx5 protein_coding protein_coding MGP_WSBEiJ_T0075004.1 MGP_WSBEiJ_G0029615.1 mouse_genomes_project 6 3690986 3695254 - MGP_WSBEiJ_P0075004 Dlx5 protein_coding protein_coding MGP_WSBEiJ_T0075005.1 MGP_WSBEiJ_G0029615.1 mouse_genomes_project 6 3693865 3695268 - Dlx5 protein_coding retained_intron MGP_WSBEiJ_T0075133.1 MGP_WSBEiJ_G0029641.1 mouse_genomes_project 6 14001907 14041675 + MGP_WSBEiJ_P0075133 Tes protein_coding protein_coding MGP_WSBEiJ_T0075134.1 MGP_WSBEiJ_G0029641.1 mouse_genomes_project 6 14001918 14005701 + Tes protein_coding retained_intron MGP_WSBEiJ_T0075135.1 MGP_WSBEiJ_G0029641.1 mouse_genomes_project 6 14001926 14033246 + MGP_WSBEiJ_P0075135 Tes protein_coding protein_coding MGP_WSBEiJ_T0075136.1 MGP_WSBEiJ_G0029641.1 mouse_genomes_project 6 14001950 14024722 + Tes protein_coding processed_transcript MGP_WSBEiJ_T0075137.1 MGP_WSBEiJ_G0029641.1 mouse_genomes_project 6 14001982 14041680 + MGP_WSBEiJ_P0075137 Tes protein_coding protein_coding MGP_WSBEiJ_T0010640.1 MGP_WSBEiJ_G0008797.1 mouse_genomes_project 6 131491899 131491955 - Mir7649 miRNA miRNA MGP_WSBEiJ_T0015061.1 MGP_WSBEiJ_G0013191.1 mouse_genomes_project 6 109310484 109310973 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011475.1 MGP_WSBEiJ_G0009632.1 mouse_genomes_project 6 149056460 149056790 - Gm22793 misc_RNA misc_RNA MGP_WSBEiJ_T0098439.1 MGP_WSBEiJ_G0037102.1 mouse_genomes_project 6 113938943 113939046 + Gm27944 snRNA snRNA MGP_WSBEiJ_T0014928.1 MGP_WSBEiJ_G0013058.1 mouse_genomes_project 6 64432257 64432689 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077058.1 MGP_WSBEiJ_G0030096.1 mouse_genomes_project 6 83594199 83688861 + MGP_WSBEiJ_P0077058 Slc4a5 protein_coding protein_coding MGP_WSBEiJ_T0077059.1 MGP_WSBEiJ_G0030096.1 mouse_genomes_project 6 83612646 83642610 + Slc4a5 protein_coding processed_transcript MGP_WSBEiJ_T0077060.1 MGP_WSBEiJ_G0030096.1 mouse_genomes_project 6 83612805 83690329 + MGP_WSBEiJ_P0077060 Slc4a5 protein_coding protein_coding MGP_WSBEiJ_T0077061.1 MGP_WSBEiJ_G0030096.1 mouse_genomes_project 6 83612805 83690330 + MGP_WSBEiJ_P0077061 Slc4a5 protein_coding protein_coding MGP_WSBEiJ_T0077062.1 MGP_WSBEiJ_G0030096.1 mouse_genomes_project 6 83659967 83673818 + Slc4a5 protein_coding processed_transcript MGP_WSBEiJ_T0077063.1 MGP_WSBEiJ_G0030096.1 mouse_genomes_project 6 83672991 83682129 + Slc4a5 protein_coding processed_transcript MGP_WSBEiJ_T0008592.1 MGP_WSBEiJ_G0006953.1 mouse_genomes_project 6 129921786 129935229 + Gm43634 lincRNA lincRNA MGP_WSBEiJ_T0078201.1 MGP_WSBEiJ_G0030317.1 mouse_genomes_project 6 116623639 116655348 + MGP_WSBEiJ_P0078201 Gm17482 protein_coding protein_coding MGP_WSBEiJ_T0008607.1 MGP_WSBEiJ_G0006963.1 mouse_genomes_project 6 138193717 138196625 - lincRNA lincRNA MGP_WSBEiJ_T0078507.1 MGP_WSBEiJ_G0030369.1 mouse_genomes_project 6 121728292 121844922 + MGP_WSBEiJ_P0078507 Ninj2 protein_coding protein_coding MGP_WSBEiJ_T0078508.1 MGP_WSBEiJ_G0030369.1 mouse_genomes_project 6 121838375 121844917 + MGP_WSBEiJ_P0078508 Ninj2 protein_coding protein_coding MGP_WSBEiJ_T0017682.1 MGP_WSBEiJ_G0015057.1 mouse_genomes_project 6 62517422 62521914 - processed_transcript retained_intron MGP_WSBEiJ_T0079206.1 MGP_WSBEiJ_G0030526.1 mouse_genomes_project 6 132281880 132305794 - MGP_WSBEiJ_P0079206 Klri1 protein_coding protein_coding MGP_WSBEiJ_T0099666.1 MGP_WSBEiJ_G0038329.1 mouse_genomes_project 6 91677530 91677626 + Gm25185 snoRNA snoRNA MGP_WSBEiJ_T0075354.1 MGP_WSBEiJ_G0029688.1 mouse_genomes_project 6 26441866 26487437 - MGP_WSBEiJ_P0075354 Rbm28 protein_coding protein_coding MGP_WSBEiJ_T0075355.1 MGP_WSBEiJ_G0029688.1 mouse_genomes_project 6 26443427 26475542 - Rbm28 protein_coding retained_intron MGP_WSBEiJ_T0075356.1 MGP_WSBEiJ_G0029688.1 mouse_genomes_project 6 26443461 26449507 - MGP_WSBEiJ_P0075356 Rbm28 protein_coding protein_coding MGP_WSBEiJ_T0075357.1 MGP_WSBEiJ_G0029688.1 mouse_genomes_project 6 26455631 26473301 - Rbm28 protein_coding retained_intron MGP_WSBEiJ_T0075358.1 MGP_WSBEiJ_G0029688.1 mouse_genomes_project 6 26477130 26480657 - Rbm28 protein_coding retained_intron MGP_WSBEiJ_T0075359.1 MGP_WSBEiJ_G0029688.1 mouse_genomes_project 6 26477590 26480432 - Rbm28 protein_coding retained_intron MGP_WSBEiJ_T0015117.1 MGP_WSBEiJ_G0013247.1 mouse_genomes_project 6 125853977 125854827 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015062.1 MGP_WSBEiJ_G0013192.1 mouse_genomes_project 6 110574596 110575074 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079027.1 MGP_WSBEiJ_G0030478.1 mouse_genomes_project 6 129244967 129259528 + MGP_WSBEiJ_P0079027 Fgf6 protein_coding protein_coding MGP_WSBEiJ_T0076362.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826302 51935960 + 9430076C15Rik protein_coding retained_intron MGP_WSBEiJ_T0076363.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826302 52241130 + MGP_WSBEiJ_P0076363 9430076C15Rik protein_coding protein_coding MGP_WSBEiJ_T0076364.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826318 51940115 + 9430076C15Rik protein_coding processed_transcript MGP_WSBEiJ_T0076365.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826327 51942628 + 9430076C15Rik protein_coding processed_transcript MGP_WSBEiJ_T0076366.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826350 51827758 + 9430076C15Rik protein_coding processed_transcript MGP_WSBEiJ_T0076367.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826350 52188455 + 9430076C15Rik protein_coding processed_transcript MGP_WSBEiJ_T0076368.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826350 51933369 + 9430076C15Rik protein_coding processed_transcript MGP_WSBEiJ_T0076369.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826350 52151605 + 9430076C15Rik protein_coding retained_intron MGP_WSBEiJ_T0076370.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51826353 51955743 + 9430076C15Rik protein_coding processed_transcript MGP_WSBEiJ_T0076371.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51829473 52235494 + MGP_WSBEiJ_P0076371 9430076C15Rik protein_coding protein_coding MGP_WSBEiJ_T0076372.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 51849808 52235494 + MGP_WSBEiJ_P0076372 9430076C15Rik protein_coding protein_coding MGP_WSBEiJ_T0076373.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 52112793 52241121 + MGP_WSBEiJ_P0076373 9430076C15Rik protein_coding protein_coding MGP_WSBEiJ_T0076374.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 52112868 52153101 + 9430076C15Rik protein_coding retained_intron MGP_WSBEiJ_T0076375.1 MGP_WSBEiJ_G0029929.1 mouse_genomes_project 6 52112869 52149951 + MGP_WSBEiJ_P0076375 9430076C15Rik protein_coding protein_coding MGP_WSBEiJ_T0010575.1 MGP_WSBEiJ_G0008732.1 mouse_genomes_project 6 15445754 15445826 - Gm26233 miRNA miRNA MGP_WSBEiJ_T0079525.1 MGP_WSBEiJ_G0030616.1 mouse_genomes_project 6 144901432 145163972 + MGP_WSBEiJ_P0079525 Pde3a protein_coding protein_coding MGP_WSBEiJ_T0079526.1 MGP_WSBEiJ_G0030616.1 mouse_genomes_project 6 144902129 145124972 + Pde3a protein_coding retained_intron MGP_WSBEiJ_T0000284.1 MGP_WSBEiJ_G0000232.1 mouse_genomes_project 6 68252804 68253501 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0076918.1 MGP_WSBEiJ_G0030068.1 mouse_genomes_project 6 80084483 80084932 + MGP_WSBEiJ_P0076918 Gm20594 protein_coding protein_coding MGP_WSBEiJ_T0014927.1 MGP_WSBEiJ_G0013057.1 mouse_genomes_project 6 64287836 64288398 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075532.1 MGP_WSBEiJ_G0029714.1 mouse_genomes_project 6 27993205 28017656 + MGP_WSBEiJ_P0075532 Cpa4 protein_coding protein_coding MGP_WSBEiJ_T0004927.1 MGP_WSBEiJ_G0004217.1 mouse_genomes_project 6 87009745 87012493 - Gm44941 antisense antisense MGP_WSBEiJ_T0079561.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146017537 146054579 - MGP_WSBEiJ_P0079561 Recql protein_coding protein_coding MGP_WSBEiJ_T0079563.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146024956 146054617 - MGP_WSBEiJ_P0079563 Recql protein_coding protein_coding MGP_WSBEiJ_T0079564.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146024960 146034796 - MGP_WSBEiJ_P0079564 Recql protein_coding protein_coding MGP_WSBEiJ_T0079565.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146025870 146031669 - Recql protein_coding processed_transcript MGP_WSBEiJ_T0079566.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146030127 146031581 - MGP_WSBEiJ_P0079566 Recql protein_coding protein_coding MGP_WSBEiJ_T0079567.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146030726 146054512 - MGP_WSBEiJ_P0079567 Recql protein_coding unknown_likely_coding MGP_WSBEiJ_T0079568.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146030764 146032224 - Recql protein_coding retained_intron MGP_WSBEiJ_T0079569.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146032627 146036571 - Recql protein_coding processed_transcript MGP_WSBEiJ_T0079570.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146035325 146035737 - Recql protein_coding retained_intron MGP_WSBEiJ_T0079571.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146042749 146054552 - MGP_WSBEiJ_P0079571 Recql protein_coding protein_coding MGP_WSBEiJ_T0079572.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146042749 146054517 - MGP_WSBEiJ_P0079572 Recql protein_coding protein_coding MGP_WSBEiJ_T0079573.1 MGP_WSBEiJ_G0030627.1 mouse_genomes_project 6 146044829 146054625 - MGP_WSBEiJ_P0079573 Recql protein_coding protein_coding MGP_WSBEiJ_T0076304.1 MGP_WSBEiJ_G0029911.1 mouse_genomes_project 6 50316087 50475030 - MGP_WSBEiJ_P0076304 Skap2 protein_coding protein_coding MGP_WSBEiJ_T0076305.1 MGP_WSBEiJ_G0029911.1 mouse_genomes_project 6 50317770 50330607 - Skap2 protein_coding processed_transcript MGP_WSBEiJ_T0076306.1 MGP_WSBEiJ_G0029911.1 mouse_genomes_project 6 50317832 50474996 - MGP_WSBEiJ_P0076306 Skap2 protein_coding protein_coding MGP_WSBEiJ_T0076307.1 MGP_WSBEiJ_G0029911.1 mouse_genomes_project 6 50318723 50369103 - MGP_WSBEiJ_P0076307 Skap2 protein_coding protein_coding MGP_WSBEiJ_T0076308.1 MGP_WSBEiJ_G0029911.1 mouse_genomes_project 6 50328892 50331347 - Skap2 protein_coding retained_intron MGP_WSBEiJ_T0076309.1 MGP_WSBEiJ_G0029911.1 mouse_genomes_project 6 50333152 50393247 - Skap2 protein_coding processed_transcript MGP_WSBEiJ_T0076310.1 MGP_WSBEiJ_G0029911.1 mouse_genomes_project 6 50452893 50475013 - Skap2 protein_coding retained_intron MGP_WSBEiJ_T0099662.1 MGP_WSBEiJ_G0038325.1 mouse_genomes_project 6 74370038 74370170 + Gm26179 snoRNA snoRNA MGP_WSBEiJ_T0078445.1 MGP_WSBEiJ_G0030363.1 mouse_genomes_project 6 120928819 120999488 - MGP_WSBEiJ_P0078445 Adipor2 protein_coding protein_coding MGP_WSBEiJ_T0078446.1 MGP_WSBEiJ_G0030363.1 mouse_genomes_project 6 120929434 120966375 - MGP_WSBEiJ_P0078446 Adipor2 protein_coding protein_coding MGP_WSBEiJ_T0078447.1 MGP_WSBEiJ_G0030363.1 mouse_genomes_project 6 120931174 120967972 - MGP_WSBEiJ_P0078447 Adipor2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078448.1 MGP_WSBEiJ_G0030363.1 mouse_genomes_project 6 120933396 120999474 - Adipor2 protein_coding retained_intron MGP_WSBEiJ_T0078449.1 MGP_WSBEiJ_G0030363.1 mouse_genomes_project 6 120946504 120999259 - MGP_WSBEiJ_P0078449 Adipor2 protein_coding protein_coding MGP_WSBEiJ_T0005004.1 MGP_WSBEiJ_G0004269.1 mouse_genomes_project 6 127630196 127634951 + Gm28809 antisense antisense MGP_WSBEiJ_T0005005.1 MGP_WSBEiJ_G0004269.1 mouse_genomes_project 6 127630777 127632443 + Gm28809 antisense antisense MGP_WSBEiJ_T0075936.1 MGP_WSBEiJ_G0029811.1 mouse_genomes_project 6 39670650 39674711 - MGP_WSBEiJ_P0075936 Olfr459 protein_coding protein_coding MGP_WSBEiJ_T0075937.1 MGP_WSBEiJ_G0029811.1 mouse_genomes_project 6 39670650 39671759 - MGP_WSBEiJ_P0075937 Olfr459 protein_coding protein_coding MGP_WSBEiJ_T0099648.1 MGP_WSBEiJ_G0038311.1 mouse_genomes_project 6 51147588 51147710 - Gm24355 snoRNA snoRNA MGP_WSBEiJ_T0078800.1 MGP_WSBEiJ_G0030435.1 mouse_genomes_project 6 126911988 126913945 + MGP_WSBEiJ_P0078800 Spsb2 protein_coding protein_coding MGP_WSBEiJ_T0078801.1 MGP_WSBEiJ_G0030435.1 mouse_genomes_project 6 126912212 126913664 + MGP_WSBEiJ_P0078801 Spsb2 protein_coding protein_coding MGP_WSBEiJ_T0078802.1 MGP_WSBEiJ_G0030435.1 mouse_genomes_project 6 126912233 126913945 + MGP_WSBEiJ_P0078802 Spsb2 protein_coding protein_coding MGP_WSBEiJ_T0078803.1 MGP_WSBEiJ_G0030435.1 mouse_genomes_project 6 126912246 126913266 + MGP_WSBEiJ_P0078803 Spsb2 protein_coding protein_coding MGP_WSBEiJ_T0078804.1 MGP_WSBEiJ_G0030435.1 mouse_genomes_project 6 126912625 126913945 + MGP_WSBEiJ_P0078804 Spsb2 protein_coding protein_coding MGP_WSBEiJ_T0000304.1 MGP_WSBEiJ_G0000252.1 mouse_genomes_project 6 70420242 70420866 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0079078.1 MGP_WSBEiJ_G0030490.1 mouse_genomes_project 6 130731733 130738601 + Foxm1 protein_coding processed_transcript MGP_WSBEiJ_T0079079.1 MGP_WSBEiJ_G0030490.1 mouse_genomes_project 6 130731733 130745733 + MGP_WSBEiJ_P0079079 Foxm1 protein_coding protein_coding MGP_WSBEiJ_T0079080.1 MGP_WSBEiJ_G0030490.1 mouse_genomes_project 6 130734471 130743554 + MGP_WSBEiJ_P0079080 Foxm1 protein_coding protein_coding MGP_WSBEiJ_T0079081.1 MGP_WSBEiJ_G0030490.1 mouse_genomes_project 6 130734933 130742946 + MGP_WSBEiJ_P0079081 Foxm1 protein_coding protein_coding MGP_WSBEiJ_T0079082.1 MGP_WSBEiJ_G0030490.1 mouse_genomes_project 6 130736073 130742459 + MGP_WSBEiJ_P0079082 Foxm1 protein_coding protein_coding MGP_WSBEiJ_T0079083.1 MGP_WSBEiJ_G0030490.1 mouse_genomes_project 6 130736151 130741759 + Foxm1 protein_coding retained_intron MGP_WSBEiJ_T0079084.1 MGP_WSBEiJ_G0030490.1 mouse_genomes_project 6 130739054 130740959 + Foxm1 protein_coding retained_intron MGP_WSBEiJ_T0079085.1 MGP_WSBEiJ_G0030490.1 mouse_genomes_project 6 130740547 130742770 + Foxm1 protein_coding retained_intron MGP_WSBEiJ_T0005554.1 MGP_WSBEiJ_G0004672.1 mouse_genomes_project 6 117661906 117670516 - 9530062K07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0078082.1 MGP_WSBEiJ_G0030297.1 mouse_genomes_project 6 114931332 114943018 + MGP_WSBEiJ_P0078082 Il17rc protein_coding protein_coding MGP_WSBEiJ_T0078083.1 MGP_WSBEiJ_G0030297.1 mouse_genomes_project 6 114932188 114936312 + MGP_WSBEiJ_P0078083 Il17rc protein_coding protein_coding MGP_WSBEiJ_T0078084.1 MGP_WSBEiJ_G0030297.1 mouse_genomes_project 6 114932699 114943018 + MGP_WSBEiJ_P0078084 Il17rc protein_coding protein_coding MGP_WSBEiJ_T0078085.1 MGP_WSBEiJ_G0030297.1 mouse_genomes_project 6 114934128 114936618 + MGP_WSBEiJ_P0078085 Il17rc protein_coding protein_coding MGP_WSBEiJ_T0078086.1 MGP_WSBEiJ_G0030297.1 mouse_genomes_project 6 114936461 114939175 + Il17rc protein_coding retained_intron MGP_WSBEiJ_T0004986.1 MGP_WSBEiJ_G0004251.1 mouse_genomes_project 6 115195580 115196731 + Gm26982 antisense antisense MGP_WSBEiJ_T0075291.1 MGP_WSBEiJ_G0029674.1 mouse_genomes_project 6 22009699 22020709 + MGP_WSBEiJ_P0075291 Spam1 protein_coding protein_coding MGP_WSBEiJ_T0075292.1 MGP_WSBEiJ_G0029674.1 mouse_genomes_project 6 22009712 22020709 + MGP_WSBEiJ_P0075292 Spam1 protein_coding protein_coding MGP_WSBEiJ_T0075293.1 MGP_WSBEiJ_G0029674.1 mouse_genomes_project 6 22009726 22015500 + Spam1 protein_coding retained_intron MGP_WSBEiJ_T0075294.1 MGP_WSBEiJ_G0029674.1 mouse_genomes_project 6 22014273 22020709 + MGP_WSBEiJ_P0075294 Spam1 protein_coding protein_coding MGP_WSBEiJ_T0008426.1 MGP_WSBEiJ_G0006825.1 mouse_genomes_project 6 32852385 32864189 + 1810058I24Rik lincRNA lincRNA MGP_WSBEiJ_T0008427.1 MGP_WSBEiJ_G0006825.1 mouse_genomes_project 6 32852447 32861369 + 1810058I24Rik lincRNA lincRNA MGP_WSBEiJ_T0008428.1 MGP_WSBEiJ_G0006825.1 mouse_genomes_project 6 32852463 32861754 + 1810058I24Rik lincRNA lincRNA MGP_WSBEiJ_T0000044.1 MGP_WSBEiJ_G0000037.1 mouse_genomes_project 6 70560891 70560930 + MGP_WSBEiJ_P0000044 Igkj2 IG_J_gene IG_J_gene MGP_WSBEiJ_T0000045.1 MGP_WSBEiJ_G0000037.1 mouse_genomes_project 6 70560891 70560934 + Igkj2 IG_J_gene processed_transcript MGP_WSBEiJ_T0002046.1 MGP_WSBEiJ_G0001966.1 mouse_genomes_project 6 92885901 92887831 + TEC TEC MGP_WSBEiJ_T0001898.1 MGP_WSBEiJ_G0001818.1 mouse_genomes_project 6 25872006 25876347 + TEC TEC MGP_WSBEiJ_T0002029.1 MGP_WSBEiJ_G0001949.1 mouse_genomes_project 6 89481883 89484767 + TEC TEC MGP_WSBEiJ_T0077007.1 MGP_WSBEiJ_G0030085.1 mouse_genomes_project 6 83459189 83461873 + MGP_WSBEiJ_P0077007 Lbx2 protein_coding protein_coding MGP_WSBEiJ_T0077008.1 MGP_WSBEiJ_G0030085.1 mouse_genomes_project 6 83460967 83461726 + Lbx2 protein_coding processed_transcript MGP_WSBEiJ_T0075912.1 MGP_WSBEiJ_G0029798.1 mouse_genomes_project 6 39177172 39180441 + MGP_WSBEiJ_P0075912 Try4 protein_coding protein_coding MGP_WSBEiJ_T0008390.1 MGP_WSBEiJ_G0006800.1 mouse_genomes_project 6 23160598 23207555 + Gm20756 lincRNA lincRNA MGP_WSBEiJ_T0008391.1 MGP_WSBEiJ_G0006800.1 mouse_genomes_project 6 23184798 23188619 + Gm20756 lincRNA lincRNA MGP_WSBEiJ_T0008492.1 MGP_WSBEiJ_G0006871.1 mouse_genomes_project 6 71232193 71252441 + Gm44174 lincRNA lincRNA MGP_WSBEiJ_T0014951.1 MGP_WSBEiJ_G0013081.1 mouse_genomes_project 6 66747465 66748389 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010588.1 MGP_WSBEiJ_G0008745.1 mouse_genomes_project 6 33113245 33113341 - Gm23053 miRNA miRNA MGP_WSBEiJ_T0075673.1 MGP_WSBEiJ_G0029737.1 mouse_genomes_project 6 32431827 32441325 + Tmem140 protein_coding processed_transcript MGP_WSBEiJ_T0075674.1 MGP_WSBEiJ_G0029737.1 mouse_genomes_project 6 32431827 32444681 + MGP_WSBEiJ_P0075674 Tmem140 protein_coding protein_coding MGP_WSBEiJ_T0075675.1 MGP_WSBEiJ_G0029737.1 mouse_genomes_project 6 32431943 32442351 + MGP_WSBEiJ_P0075675 Tmem140 protein_coding protein_coding MGP_WSBEiJ_T0075676.1 MGP_WSBEiJ_G0029737.1 mouse_genomes_project 6 32435756 32438563 + Tmem140 protein_coding processed_transcript MGP_WSBEiJ_T0075677.1 MGP_WSBEiJ_G0029737.1 mouse_genomes_project 6 32435788 32442476 + MGP_WSBEiJ_P0075677 Tmem140 protein_coding protein_coding MGP_WSBEiJ_T0075680.1 MGP_WSBEiJ_G0029737.1 mouse_genomes_project 6 32442451 32443293 + Tmem140 protein_coding processed_transcript MGP_WSBEiJ_T0077790.1 MGP_WSBEiJ_G0030245.1 mouse_genomes_project 6 98225298 98249736 - MGP_WSBEiJ_P0077790 Uba3 protein_coding protein_coding MGP_WSBEiJ_T0077791.1 MGP_WSBEiJ_G0030245.1 mouse_genomes_project 6 98225446 98249735 - MGP_WSBEiJ_P0077791 Uba3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077792.1 MGP_WSBEiJ_G0030245.1 mouse_genomes_project 6 98225635 98249823 - MGP_WSBEiJ_P0077792 Uba3 protein_coding protein_coding MGP_WSBEiJ_T0077793.1 MGP_WSBEiJ_G0030245.1 mouse_genomes_project 6 98238530 98240710 - Uba3 protein_coding retained_intron MGP_WSBEiJ_T0077794.1 MGP_WSBEiJ_G0030245.1 mouse_genomes_project 6 98247189 98249741 - Uba3 protein_coding retained_intron MGP_WSBEiJ_T0077795.1 MGP_WSBEiJ_G0030245.1 mouse_genomes_project 6 98248266 98249744 - Uba3 protein_coding retained_intron MGP_WSBEiJ_T0002071.1 MGP_WSBEiJ_G0001991.1 mouse_genomes_project 6 109897615 109899850 - TEC TEC MGP_WSBEiJ_T0010604.1 MGP_WSBEiJ_G0008761.1 mouse_genomes_project 6 82223322 82223400 - Mir468 miRNA miRNA MGP_WSBEiJ_T0076501.1 MGP_WSBEiJ_G0029958.1 mouse_genomes_project 6 55617077 55621469 + Vmn1r4 protein_coding retained_intron MGP_WSBEiJ_T0076502.1 MGP_WSBEiJ_G0029958.1 mouse_genomes_project 6 55617084 55679098 + MGP_WSBEiJ_P0076502 Vmn1r4 protein_coding protein_coding MGP_WSBEiJ_T0076503.1 MGP_WSBEiJ_G0029958.1 mouse_genomes_project 6 55677697 55678745 + MGP_WSBEiJ_P0076503 Vmn1r4 protein_coding protein_coding MGP_WSBEiJ_T0005045.1 MGP_WSBEiJ_G0004303.1 mouse_genomes_project 6 148810388 148813846 + Gm15687 antisense antisense MGP_WSBEiJ_T0078728.1 MGP_WSBEiJ_G0030421.1 mouse_genomes_project 6 126532786 126550504 + MGP_WSBEiJ_P0078728 C1rl protein_coding protein_coding MGP_WSBEiJ_T0075008.1 MGP_WSBEiJ_G0029617.1 mouse_genomes_project 6 4347450 4355735 + MGP_WSBEiJ_P0075008 Tac1 protein_coding protein_coding MGP_WSBEiJ_T0075009.1 MGP_WSBEiJ_G0029617.1 mouse_genomes_project 6 4347653 4355729 + MGP_WSBEiJ_P0075009 Tac1 protein_coding protein_coding MGP_WSBEiJ_T0075010.1 MGP_WSBEiJ_G0029617.1 mouse_genomes_project 6 4347675 4355453 + MGP_WSBEiJ_P0075010 Tac1 protein_coding protein_coding MGP_WSBEiJ_T0075011.1 MGP_WSBEiJ_G0029617.1 mouse_genomes_project 6 4355120 4358589 + Tac1 protein_coding processed_transcript MGP_WSBEiJ_T0098454.1 MGP_WSBEiJ_G0037117.1 mouse_genomes_project 6 132823301 132823375 + Gm22621 snRNA snRNA MGP_WSBEiJ_T0077597.1 MGP_WSBEiJ_G0030206.1 mouse_genomes_project 6 91144891 91177340 + MGP_WSBEiJ_P0077597 Uroc1 protein_coding protein_coding MGP_WSBEiJ_T0077598.1 MGP_WSBEiJ_G0030206.1 mouse_genomes_project 6 91144896 91177335 + MGP_WSBEiJ_P0077598 Uroc1 protein_coding protein_coding MGP_WSBEiJ_T0075916.1 MGP_WSBEiJ_G0029802.1 mouse_genomes_project 6 39250180 39253911 - MGP_WSBEiJ_P0075916 protein_coding protein_coding MGP_WSBEiJ_T0078075.1 MGP_WSBEiJ_G0030296.1 mouse_genomes_project 6 114918656 114920770 + Il17re protein_coding retained_intron MGP_WSBEiJ_T0078076.1 MGP_WSBEiJ_G0030296.1 mouse_genomes_project 6 114918702 114930303 + MGP_WSBEiJ_P0078076 Il17re protein_coding protein_coding MGP_WSBEiJ_T0078077.1 MGP_WSBEiJ_G0030296.1 mouse_genomes_project 6 114918729 114930275 + MGP_WSBEiJ_P0078077 Il17re protein_coding protein_coding MGP_WSBEiJ_T0078078.1 MGP_WSBEiJ_G0030296.1 mouse_genomes_project 6 114918790 114930044 + MGP_WSBEiJ_P0078078 Il17re protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078079.1 MGP_WSBEiJ_G0030296.1 mouse_genomes_project 6 114918790 114930044 + MGP_WSBEiJ_P0078079 Il17re protein_coding protein_coding MGP_WSBEiJ_T0078080.1 MGP_WSBEiJ_G0030296.1 mouse_genomes_project 6 114924688 114930662 + Il17re protein_coding retained_intron MGP_WSBEiJ_T0078081.1 MGP_WSBEiJ_G0030296.1 mouse_genomes_project 6 114926260 114929888 + Il17re protein_coding retained_intron MGP_WSBEiJ_T0079434.1 MGP_WSBEiJ_G0030602.1 mouse_genomes_project 6 141214778 141233214 + MGP_WSBEiJ_P0079434 Strap protein_coding protein_coding MGP_WSBEiJ_T0079435.1 MGP_WSBEiJ_G0030602.1 mouse_genomes_project 6 141226333 141230019 + Strap protein_coding processed_transcript MGP_WSBEiJ_T0079436.1 MGP_WSBEiJ_G0030602.1 mouse_genomes_project 6 141230490 141231958 + Strap protein_coding retained_intron MGP_WSBEiJ_T0017661.1 MGP_WSBEiJ_G0015050.1 mouse_genomes_project 6 50648419 50652205 + Hoxaas2 processed_transcript antisense MGP_WSBEiJ_T0017662.1 MGP_WSBEiJ_G0015050.1 mouse_genomes_project 6 50649272 50652318 + Hoxaas2 processed_transcript retained_intron MGP_WSBEiJ_T0017663.1 MGP_WSBEiJ_G0015050.1 mouse_genomes_project 6 50651264 50652318 + Hoxaas2 processed_transcript processed_transcript MGP_WSBEiJ_T0078579.1 MGP_WSBEiJ_G0030383.1 mouse_genomes_project 6 122885242 122888882 + MGP_WSBEiJ_P0078579 Pex26 protein_coding protein_coding MGP_WSBEiJ_T0078580.1 MGP_WSBEiJ_G0030383.1 mouse_genomes_project 6 122885329 122898389 + MGP_WSBEiJ_P0078580 Pex26 protein_coding protein_coding MGP_WSBEiJ_T0078581.1 MGP_WSBEiJ_G0030383.1 mouse_genomes_project 6 122885338 122888522 + Pex26 protein_coding retained_intron MGP_WSBEiJ_T0078582.1 MGP_WSBEiJ_G0030383.1 mouse_genomes_project 6 122885705 122895819 + MGP_WSBEiJ_P0078582 Pex26 protein_coding protein_coding MGP_WSBEiJ_T0004840.1 MGP_WSBEiJ_G0004154.1 mouse_genomes_project 6 28105883 28114205 + Gm13782 antisense antisense MGP_WSBEiJ_T0077726.1 MGP_WSBEiJ_G0030229.1 mouse_genomes_project 6 93127321 93129957 - MGP_WSBEiJ_P0077726 Trh protein_coding protein_coding MGP_WSBEiJ_T0004842.1 MGP_WSBEiJ_G0004156.1 mouse_genomes_project 6 29773659 29786475 + Plxna4os3 antisense antisense MGP_WSBEiJ_T0004843.1 MGP_WSBEiJ_G0004156.1 mouse_genomes_project 6 29773743 29786467 + Plxna4os3 antisense antisense MGP_WSBEiJ_T0008634.1 MGP_WSBEiJ_G0006980.1 mouse_genomes_project 6 149542000 149549557 - Gm15704 lincRNA lincRNA MGP_WSBEiJ_T0074911.1 MGP_WSBEiJ_G0029596.1 mouse_genomes_project 6 383265 464351 - MGP_WSBEiJ_P0074911 Calcr protein_coding protein_coding MGP_WSBEiJ_T0074912.1 MGP_WSBEiJ_G0029596.1 mouse_genomes_project 6 383305 465435 - MGP_WSBEiJ_P0074912 Calcr protein_coding protein_coding MGP_WSBEiJ_T0074913.1 MGP_WSBEiJ_G0029596.1 mouse_genomes_project 6 383318 465379 - MGP_WSBEiJ_P0074913 Calcr protein_coding protein_coding MGP_WSBEiJ_T0074914.1 MGP_WSBEiJ_G0029596.1 mouse_genomes_project 6 384406 453692 - MGP_WSBEiJ_P0074914 Calcr protein_coding protein_coding MGP_WSBEiJ_T0074915.1 MGP_WSBEiJ_G0029596.1 mouse_genomes_project 6 384406 453692 - MGP_WSBEiJ_P0074915 Calcr protein_coding protein_coding MGP_WSBEiJ_T0002060.1 MGP_WSBEiJ_G0001980.1 mouse_genomes_project 6 102180082 102180689 - TEC TEC MGP_WSBEiJ_T0005025.1 MGP_WSBEiJ_G0004286.1 mouse_genomes_project 6 138160651 138163748 + 2810454H06Rik antisense antisense MGP_WSBEiJ_T0077727.1 MGP_WSBEiJ_G0030230.1 mouse_genomes_project 6 93260057 93613865 - MGP_WSBEiJ_P0077727 Prickle2 protein_coding protein_coding MGP_WSBEiJ_T0077728.1 MGP_WSBEiJ_G0030230.1 mouse_genomes_project 6 93260057 93465479 - MGP_WSBEiJ_P0077728 Prickle2 protein_coding protein_coding MGP_WSBEiJ_T0077729.1 MGP_WSBEiJ_G0030230.1 mouse_genomes_project 6 93260059 93430975 - MGP_WSBEiJ_P0077729 Prickle2 protein_coding protein_coding MGP_WSBEiJ_T0077730.1 MGP_WSBEiJ_G0030230.1 mouse_genomes_project 6 93264530 93376876 - MGP_WSBEiJ_P0077730 Prickle2 protein_coding protein_coding MGP_WSBEiJ_T0010630.1 MGP_WSBEiJ_G0008787.1 mouse_genomes_project 6 122478444 122478541 - Gm25193 miRNA miRNA MGP_WSBEiJ_T0075941.1 MGP_WSBEiJ_G0029813.1 mouse_genomes_project 6 39771080 39782793 + MGP_WSBEiJ_P0075941 Sval2 protein_coding protein_coding MGP_WSBEiJ_T0075942.1 MGP_WSBEiJ_G0029813.1 mouse_genomes_project 6 39778612 39782752 + MGP_WSBEiJ_P0075942 Sval2 protein_coding protein_coding MGP_WSBEiJ_T0075943.1 MGP_WSBEiJ_G0029813.1 mouse_genomes_project 6 39780168 39782752 + MGP_WSBEiJ_P0075943 Sval2 protein_coding protein_coding MGP_WSBEiJ_T0075944.1 MGP_WSBEiJ_G0029813.1 mouse_genomes_project 6 39781719 39782669 + Sval2 protein_coding retained_intron MGP_WSBEiJ_T0079264.1 MGP_WSBEiJ_G0030564.1 mouse_genomes_project 6 136509998 136512351 + MGP_WSBEiJ_P0079264 5530400C23Rik protein_coding protein_coding MGP_WSBEiJ_T0079004.1 MGP_WSBEiJ_G0030474.1 mouse_genomes_project 6 129085416 129106606 + MGP_WSBEiJ_P0079004 Akap3 protein_coding protein_coding MGP_WSBEiJ_T0079005.1 MGP_WSBEiJ_G0030474.1 mouse_genomes_project 6 129085462 129106603 + MGP_WSBEiJ_P0079005 Akap3 protein_coding protein_coding MGP_WSBEiJ_T0079006.1 MGP_WSBEiJ_G0030474.1 mouse_genomes_project 6 129085478 129106606 + MGP_WSBEiJ_P0079006 Akap3 protein_coding protein_coding MGP_WSBEiJ_T0008639.1 MGP_WSBEiJ_G0006984.1 mouse_genomes_project 6 151059260 151060527 - Gm15767 lincRNA lincRNA MGP_WSBEiJ_T0008640.1 MGP_WSBEiJ_G0006984.1 mouse_genomes_project 6 151059456 151060519 - Gm15767 lincRNA lincRNA MGP_WSBEiJ_T0075376.1 MGP_WSBEiJ_G0029693.1 mouse_genomes_project 6 26661794 26669393 + Fam71f1 protein_coding processed_transcript MGP_WSBEiJ_T0075377.1 MGP_WSBEiJ_G0029693.1 mouse_genomes_project 6 26661794 26679944 + MGP_WSBEiJ_P0075377 Fam71f1 protein_coding protein_coding MGP_WSBEiJ_T0075378.1 MGP_WSBEiJ_G0029693.1 mouse_genomes_project 6 26661811 26679779 + MGP_WSBEiJ_P0075378 Fam71f1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075379.1 MGP_WSBEiJ_G0029693.1 mouse_genomes_project 6 26661811 26679779 + MGP_WSBEiJ_P0075379 Fam71f1 protein_coding protein_coding MGP_WSBEiJ_T0075380.1 MGP_WSBEiJ_G0029693.1 mouse_genomes_project 6 26661853 26679779 + MGP_WSBEiJ_P0075380 Fam71f1 protein_coding protein_coding MGP_WSBEiJ_T0100927.1 MGP_WSBEiJ_G0039385.1 mouse_genomes_project 6 90817508 90817680 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002018.1 MGP_WSBEiJ_G0001938.1 mouse_genomes_project 6 88228604 88231240 + TEC TEC MGP_WSBEiJ_T0008393.1 MGP_WSBEiJ_G0006802.1 mouse_genomes_project 6 27364279 27372247 + Smkr-ps lincRNA lincRNA MGP_WSBEiJ_T0008394.1 MGP_WSBEiJ_G0006802.1 mouse_genomes_project 6 27364281 27372498 + Smkr-ps lincRNA lincRNA MGP_WSBEiJ_T0002030.1 MGP_WSBEiJ_G0001950.1 mouse_genomes_project 6 89523320 89526442 - TEC TEC MGP_WSBEiJ_T0015065.1 MGP_WSBEiJ_G0013195.1 mouse_genomes_project 6 110891097 110891722 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004832.1 MGP_WSBEiJ_G0004147.1 mouse_genomes_project 6 15262767 15285019 - Gm15592 antisense antisense MGP_WSBEiJ_T0005042.1 MGP_WSBEiJ_G0004300.1 mouse_genomes_project 6 148460195 148501274 + Sox5os4 antisense antisense MGP_WSBEiJ_T0079550.1 MGP_WSBEiJ_G0030624.1 mouse_genomes_project 6 145898467 145942739 - MGP_WSBEiJ_P0079550 Slco1a5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079551.1 MGP_WSBEiJ_G0030624.1 mouse_genomes_project 6 145898467 145990232 - MGP_WSBEiJ_P0079551 Slco1a5 protein_coding protein_coding MGP_WSBEiJ_T0079552.1 MGP_WSBEiJ_G0030624.1 mouse_genomes_project 6 145898467 145945973 - MGP_WSBEiJ_P0079552 Slco1a5 protein_coding protein_coding MGP_WSBEiJ_T0079553.1 MGP_WSBEiJ_G0030624.1 mouse_genomes_project 6 145913139 145945973 - Slco1a5 protein_coding retained_intron MGP_WSBEiJ_T0079554.1 MGP_WSBEiJ_G0030624.1 mouse_genomes_project 6 145922909 145990199 - MGP_WSBEiJ_P0079554 Slco1a5 protein_coding protein_coding MGP_WSBEiJ_T0008594.1 MGP_WSBEiJ_G0006955.1 mouse_genomes_project 6 130974501 130976895 - Gm44009 lincRNA lincRNA MGP_WSBEiJ_T0099674.1 MGP_WSBEiJ_G0038337.1 mouse_genomes_project 6 106607162 106607301 + Gm23339 snoRNA snoRNA MGP_WSBEiJ_T0008451.1 MGP_WSBEiJ_G0006839.1 mouse_genomes_project 6 47124551 47130293 + Gm7932 lincRNA lincRNA MGP_WSBEiJ_T0008452.1 MGP_WSBEiJ_G0006839.1 mouse_genomes_project 6 47124646 47128654 + Gm7932 lincRNA lincRNA MGP_WSBEiJ_T0077848.1 MGP_WSBEiJ_G0030252.1 mouse_genomes_project 6 100418013 100845557 - MGP_WSBEiJ_P0077848 Gm20696 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077851.1 MGP_WSBEiJ_G0030252.1 mouse_genomes_project 6 100602307 100613040 - Gm20696 protein_coding retained_intron MGP_WSBEiJ_T0077852.1 MGP_WSBEiJ_G0030252.1 mouse_genomes_project 6 100602338 100811229 - Gm20696 protein_coding retained_intron MGP_WSBEiJ_T0008447.1 MGP_WSBEiJ_G0006835.1 mouse_genomes_project 6 46611942 46636672 - Gm44696 lincRNA lincRNA MGP_WSBEiJ_T0014805.1 MGP_WSBEiJ_G0012935.1 mouse_genomes_project 6 10945724 10946029 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011459.1 MGP_WSBEiJ_G0009616.1 mouse_genomes_project 6 85546695 85546950 + Gm26353 misc_RNA misc_RNA MGP_WSBEiJ_T0074895.1 MGP_WSBEiJ_G0029593.1 mouse_genomes_project 6 75160 107797 - MGP_WSBEiJ_P0074895 Samd9l protein_coding protein_coding MGP_WSBEiJ_T0074896.1 MGP_WSBEiJ_G0029593.1 mouse_genomes_project 6 79853 91667 - MGP_WSBEiJ_P0074896 Samd9l protein_coding protein_coding MGP_WSBEiJ_T0008453.1 MGP_WSBEiJ_G0006840.1 mouse_genomes_project 6 48374435 48433865 + Gm3455 lincRNA lincRNA MGP_WSBEiJ_T0014819.1 MGP_WSBEiJ_G0012949.1 mouse_genomes_project 6 18573693 18573913 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008418.1 MGP_WSBEiJ_G0006817.1 mouse_genomes_project 6 29164010 29168962 - Gm43293 lincRNA lincRNA MGP_WSBEiJ_T0001880.1 MGP_WSBEiJ_G0001800.1 mouse_genomes_project 6 9739551 9740497 + TEC TEC MGP_WSBEiJ_T0100913.1 MGP_WSBEiJ_G0039371.1 mouse_genomes_project 6 57483540 57484440 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011428.1 MGP_WSBEiJ_G0009585.1 mouse_genomes_project 6 14670690 14670946 + Gm27542 misc_RNA misc_RNA MGP_WSBEiJ_T0004954.1 MGP_WSBEiJ_G0004232.1 mouse_genomes_project 6 91505939 91507038 + Gm44123 antisense antisense MGP_WSBEiJ_T0000282.1 MGP_WSBEiJ_G0000230.1 mouse_genomes_project 6 68119844 68120143 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0002063.1 MGP_WSBEiJ_G0001983.1 mouse_genomes_project 6 102603926 102606779 - TEC TEC MGP_WSBEiJ_T0079143.1 MGP_WSBEiJ_G0030508.1 mouse_genomes_project 6 131570258 131580206 + MGP_WSBEiJ_P0079143 Klrb1f protein_coding protein_coding MGP_WSBEiJ_T0079144.1 MGP_WSBEiJ_G0030508.1 mouse_genomes_project 6 131570258 131580206 + MGP_WSBEiJ_P0079144 Klrb1f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079145.1 MGP_WSBEiJ_G0030508.1 mouse_genomes_project 6 131570277 131579452 + MGP_WSBEiJ_P0079145 Klrb1f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079146.1 MGP_WSBEiJ_G0030508.1 mouse_genomes_project 6 131570282 131575541 + Klrb1f protein_coding retained_intron MGP_WSBEiJ_T0079147.1 MGP_WSBEiJ_G0030508.1 mouse_genomes_project 6 131570284 131576614 + MGP_WSBEiJ_P0079147 Klrb1f protein_coding protein_coding MGP_WSBEiJ_T0077204.1 MGP_WSBEiJ_G0030120.1 mouse_genomes_project 6 85853685 85895953 - MGP_WSBEiJ_P0077204 protein_coding protein_coding MGP_WSBEiJ_T0077205.1 MGP_WSBEiJ_G0030120.1 mouse_genomes_project 6 85853690 85896023 - MGP_WSBEiJ_P0077205 protein_coding protein_coding MGP_WSBEiJ_T0077206.1 MGP_WSBEiJ_G0030120.1 mouse_genomes_project 6 85856348 85860358 - protein_coding processed_transcript MGP_WSBEiJ_T0014890.1 MGP_WSBEiJ_G0013020.1 mouse_genomes_project 6 48962259 48963643 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077903.1 MGP_WSBEiJ_G0030266.1 mouse_genomes_project 6 108182598 108191161 + MGP_WSBEiJ_P0077903 Trnt1 protein_coding protein_coding MGP_WSBEiJ_T0077904.1 MGP_WSBEiJ_G0030266.1 mouse_genomes_project 6 108182619 108195343 + MGP_WSBEiJ_P0077904 Trnt1 protein_coding protein_coding MGP_WSBEiJ_T0077905.1 MGP_WSBEiJ_G0030266.1 mouse_genomes_project 6 108182644 108196184 + MGP_WSBEiJ_P0077905 Trnt1 protein_coding protein_coding MGP_WSBEiJ_T0077906.1 MGP_WSBEiJ_G0030266.1 mouse_genomes_project 6 108182644 108195126 + MGP_WSBEiJ_P0077906 Trnt1 protein_coding protein_coding MGP_WSBEiJ_T0077907.1 MGP_WSBEiJ_G0030266.1 mouse_genomes_project 6 108182648 108183643 + Trnt1 protein_coding retained_intron MGP_WSBEiJ_T0077908.1 MGP_WSBEiJ_G0030266.1 mouse_genomes_project 6 108182691 108186534 + Trnt1 protein_coding processed_transcript MGP_WSBEiJ_T0077909.1 MGP_WSBEiJ_G0030266.1 mouse_genomes_project 6 108182764 108186830 + MGP_WSBEiJ_P0077909 Trnt1 protein_coding protein_coding MGP_WSBEiJ_T0077910.1 MGP_WSBEiJ_G0030266.1 mouse_genomes_project 6 108182985 108187944 + MGP_WSBEiJ_P0077910 Trnt1 protein_coding protein_coding MGP_WSBEiJ_T0008631.1 MGP_WSBEiJ_G0006977.1 mouse_genomes_project 6 147289549 147350059 - 1700060C16Rik lincRNA lincRNA MGP_WSBEiJ_T0002061.1 MGP_WSBEiJ_G0001981.1 mouse_genomes_project 6 102412425 102415297 + TEC TEC MGP_WSBEiJ_T0015128.1 MGP_WSBEiJ_G0013258.1 mouse_genomes_project 6 129405613 129406133 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008586.1 MGP_WSBEiJ_G0006947.1 mouse_genomes_project 6 126388096 126389303 - 1700027F06Rik lincRNA lincRNA MGP_WSBEiJ_T0014981.1 MGP_WSBEiJ_G0013111.1 mouse_genomes_project 6 75269663 75270646 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001887.1 MGP_WSBEiJ_G0001807.1 mouse_genomes_project 6 15099635 15101456 - TEC TEC MGP_WSBEiJ_T0002451.1 MGP_WSBEiJ_G0002365.1 mouse_genomes_project 6 39421006 39421018 + MGP_WSBEiJ_P0002451 Trbd1 TR_D_gene TR_D_gene MGP_WSBEiJ_T0076697.1 MGP_WSBEiJ_G0030021.1 mouse_genomes_project 6 70761901 70767744 - MGP_WSBEiJ_P0076697 Tex37 protein_coding protein_coding MGP_WSBEiJ_T0002627.1 MGP_WSBEiJ_G0002517.1 mouse_genomes_project 6 39068923 39069416 + MGP_WSBEiJ_P0002627 Trbv21 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002628.1 MGP_WSBEiJ_G0002517.1 mouse_genomes_project 6 39069128 39069418 + MGP_WSBEiJ_P0002628 Trbv21 TR_V_gene TR_V_gene MGP_WSBEiJ_T0004884.1 MGP_WSBEiJ_G0004187.1 mouse_genomes_project 6 53041753 53051227 - Gm44026 antisense antisense MGP_WSBEiJ_T0077025.1 MGP_WSBEiJ_G0030091.1 mouse_genomes_project 6 83495607 83499279 - MGP_WSBEiJ_P0077025 Ino80b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077026.1 MGP_WSBEiJ_G0030091.1 mouse_genomes_project 6 83495607 83499279 - MGP_WSBEiJ_P0077026 Ino80b protein_coding protein_coding MGP_WSBEiJ_T0077027.1 MGP_WSBEiJ_G0030091.1 mouse_genomes_project 6 83495670 83498877 - MGP_WSBEiJ_P0077027 Ino80b protein_coding protein_coding MGP_WSBEiJ_T0077028.1 MGP_WSBEiJ_G0030091.1 mouse_genomes_project 6 83498260 83498716 - Ino80b protein_coding retained_intron MGP_WSBEiJ_T0000210.1 MGP_WSBEiJ_G0000158.1 mouse_genomes_project 6 70473898 70474489 + MGP_WSBEiJ_P0000210 Igkv3-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0008561.1 MGP_WSBEiJ_G0006924.1 mouse_genomes_project 6 108591778 108694054 - Gm44398 lincRNA lincRNA MGP_WSBEiJ_T0010643.1 MGP_WSBEiJ_G0008800.1 mouse_genomes_project 6 139061329 139061434 + Gm22892 miRNA miRNA MGP_WSBEiJ_T0076688.1 MGP_WSBEiJ_G0030018.1 mouse_genomes_project 6 66888452 66890187 - MGP_WSBEiJ_P0076688 Tacstd2 protein_coding protein_coding MGP_WSBEiJ_T0075996.1 MGP_WSBEiJ_G0029830.1 mouse_genomes_project 6 40426928 40455230 - MGP_WSBEiJ_P0075996 Olfr457 protein_coding protein_coding MGP_WSBEiJ_T0079402.1 MGP_WSBEiJ_G0030598.1 mouse_genomes_project 6 140339513 140385337 + MGP_WSBEiJ_P0079402 Pde6h protein_coding protein_coding MGP_WSBEiJ_T0079405.1 MGP_WSBEiJ_G0030598.1 mouse_genomes_project 6 140376676 140390727 + MGP_WSBEiJ_P0079405 Pde6h protein_coding protein_coding MGP_WSBEiJ_T0079406.1 MGP_WSBEiJ_G0030598.1 mouse_genomes_project 6 140376686 140385582 + Pde6h protein_coding retained_intron MGP_WSBEiJ_T0079407.1 MGP_WSBEiJ_G0030598.1 mouse_genomes_project 6 140381389 140385368 + MGP_WSBEiJ_P0079407 Pde6h protein_coding protein_coding MGP_WSBEiJ_T0004919.1 MGP_WSBEiJ_G0004211.1 mouse_genomes_project 6 84174762 84175868 - 1700124L16Rik antisense antisense MGP_WSBEiJ_T0004920.1 MGP_WSBEiJ_G0004211.1 mouse_genomes_project 6 84174762 84175845 - 1700124L16Rik antisense antisense MGP_WSBEiJ_T0004921.1 MGP_WSBEiJ_G0004211.1 mouse_genomes_project 6 84174762 84175511 - 1700124L16Rik antisense antisense MGP_WSBEiJ_T0079259.1 MGP_WSBEiJ_G0030561.1 mouse_genomes_project 6 136204072 136205011 - MGP_WSBEiJ_P0079259 Tas2r103 protein_coding protein_coding MGP_WSBEiJ_T0076510.1 MGP_WSBEiJ_G0029965.1 mouse_genomes_project 6 55905973 55906908 + MGP_WSBEiJ_P0076510 Vmn1r12 protein_coding protein_coding MGP_WSBEiJ_T0002072.1 MGP_WSBEiJ_G0001992.1 mouse_genomes_project 6 110029225 110030403 - TEC TEC MGP_WSBEiJ_T0005019.1 MGP_WSBEiJ_G0004280.1 mouse_genomes_project 6 131468734 131492089 - Gm15987 antisense antisense MGP_WSBEiJ_T0077953.1 MGP_WSBEiJ_G0030277.1 mouse_genomes_project 6 113777850 113811494 - MGP_WSBEiJ_P0077953 Ssu2 protein_coding protein_coding MGP_WSBEiJ_T0077954.1 MGP_WSBEiJ_G0030277.1 mouse_genomes_project 6 113791447 113801211 - Ssu2 protein_coding processed_transcript MGP_WSBEiJ_T0077955.1 MGP_WSBEiJ_G0030277.1 mouse_genomes_project 6 113791982 113799224 - Ssu2 protein_coding retained_intron MGP_WSBEiJ_T0077956.1 MGP_WSBEiJ_G0030277.1 mouse_genomes_project 6 113792403 113811470 - MGP_WSBEiJ_P0077956 Ssu2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0098445.1 MGP_WSBEiJ_G0037108.1 mouse_genomes_project 6 122193696 122193798 + Gm24391 snRNA snRNA MGP_WSBEiJ_T0077869.1 MGP_WSBEiJ_G0030259.1 mouse_genomes_project 6 102102355 102116914 + protein_coding retained_intron MGP_WSBEiJ_T0077870.1 MGP_WSBEiJ_G0030259.1 mouse_genomes_project 6 102102406 102117003 + MGP_WSBEiJ_P0077870 protein_coding protein_coding MGP_WSBEiJ_T0001922.1 MGP_WSBEiJ_G0001842.1 mouse_genomes_project 6 43234137 43237818 + TEC TEC MGP_WSBEiJ_T0015097.1 MGP_WSBEiJ_G0013227.1 mouse_genomes_project 6 122697232 122697360 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001928.1 MGP_WSBEiJ_G0001848.1 mouse_genomes_project 6 43462157 43464317 + TEC TEC MGP_WSBEiJ_T0001896.1 MGP_WSBEiJ_G0001816.1 mouse_genomes_project 6 25516995 25520927 - TEC TEC MGP_WSBEiJ_T0098421.1 MGP_WSBEiJ_G0037084.1 mouse_genomes_project 6 65160742 65160848 - Gm23543 snRNA snRNA MGP_WSBEiJ_T0076747.1 MGP_WSBEiJ_G0030034.1 mouse_genomes_project 6 71731523 71745793 - MGP_WSBEiJ_P0076747 Mrpl35 protein_coding protein_coding MGP_WSBEiJ_T0076748.1 MGP_WSBEiJ_G0030034.1 mouse_genomes_project 6 71738121 71745746 - MGP_WSBEiJ_P0076748 Mrpl35 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076749.1 MGP_WSBEiJ_G0030034.1 mouse_genomes_project 6 71739629 71748930 - Mrpl35 protein_coding processed_transcript MGP_WSBEiJ_T0076722.1 MGP_WSBEiJ_G0030030.1 mouse_genomes_project 6 71391430 71408455 + MGP_WSBEiJ_P0076722 Rnf103 protein_coding protein_coding MGP_WSBEiJ_T0076723.1 MGP_WSBEiJ_G0030030.1 mouse_genomes_project 6 71391446 71408455 + MGP_WSBEiJ_P0076723 Rnf103 protein_coding protein_coding MGP_WSBEiJ_T0076724.1 MGP_WSBEiJ_G0030030.1 mouse_genomes_project 6 71391539 71408337 + MGP_WSBEiJ_P0076724 Rnf103 protein_coding protein_coding MGP_WSBEiJ_T0076725.1 MGP_WSBEiJ_G0030030.1 mouse_genomes_project 6 71401432 71404730 + Rnf103 protein_coding retained_intron MGP_WSBEiJ_T0014982.1 MGP_WSBEiJ_G0013112.1 mouse_genomes_project 6 75458300 75459269 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079109.1 MGP_WSBEiJ_G0030496.1 mouse_genomes_project 6 130862148 130911859 - MGP_WSBEiJ_P0079109 Pzp protein_coding protein_coding MGP_WSBEiJ_T0079110.1 MGP_WSBEiJ_G0030496.1 mouse_genomes_project 6 130866243 130868529 - Pzp protein_coding processed_transcript MGP_WSBEiJ_T0079111.1 MGP_WSBEiJ_G0030496.1 mouse_genomes_project 6 130875382 130877258 - Pzp protein_coding retained_intron MGP_WSBEiJ_T0079112.1 MGP_WSBEiJ_G0030496.1 mouse_genomes_project 6 130905383 130911842 - MGP_WSBEiJ_P0079112 Pzp protein_coding protein_coding MGP_WSBEiJ_T0076465.1 MGP_WSBEiJ_G0029951.1 mouse_genomes_project 6 54687440 54705029 + MGP_WSBEiJ_P0076465 Ppp1r17 protein_coding protein_coding MGP_WSBEiJ_T0000161.1 MGP_WSBEiJ_G0000123.1 mouse_genomes_project 6 68113043 68113517 + MGP_WSBEiJ_P0000161 Igkv20-101-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0079156.1 MGP_WSBEiJ_G0030512.1 mouse_genomes_project 6 131895053 131915487 + MGP_WSBEiJ_P0079156 Clec12a protein_coding protein_coding MGP_WSBEiJ_T0079157.1 MGP_WSBEiJ_G0030512.1 mouse_genomes_project 6 131902129 131908272 + Clec12a protein_coding retained_intron MGP_WSBEiJ_T0079158.1 MGP_WSBEiJ_G0030512.1 mouse_genomes_project 6 131902351 131921439 + MGP_WSBEiJ_P0079158 Clec12a protein_coding protein_coding MGP_WSBEiJ_T0079159.1 MGP_WSBEiJ_G0030512.1 mouse_genomes_project 6 131911449 131920552 + Clec12a protein_coding retained_intron MGP_WSBEiJ_T0008461.1 MGP_WSBEiJ_G0006846.1 mouse_genomes_project 6 49781171 49796369 - Gm26677 lincRNA lincRNA MGP_WSBEiJ_T0077611.1 MGP_WSBEiJ_G0030209.1 mouse_genomes_project 6 91274087 91286756 + MGP_WSBEiJ_P0077611 Klf15 protein_coding protein_coding MGP_WSBEiJ_T0077612.1 MGP_WSBEiJ_G0030209.1 mouse_genomes_project 6 91274185 91286756 + MGP_WSBEiJ_P0077612 Klf15 protein_coding protein_coding MGP_WSBEiJ_T0077613.1 MGP_WSBEiJ_G0030209.1 mouse_genomes_project 6 91276811 91286753 + MGP_WSBEiJ_P0077613 Klf15 protein_coding protein_coding MGP_WSBEiJ_T0077614.1 MGP_WSBEiJ_G0030209.1 mouse_genomes_project 6 91277907 91286753 + MGP_WSBEiJ_P0077614 Klf15 protein_coding protein_coding MGP_WSBEiJ_T0077615.1 MGP_WSBEiJ_G0030209.1 mouse_genomes_project 6 91278625 91286740 + MGP_WSBEiJ_P0077615 Klf15 protein_coding protein_coding MGP_WSBEiJ_T0005047.1 MGP_WSBEiJ_G0004305.1 mouse_genomes_project 6 149217513 149219724 + Gm15499 antisense antisense MGP_WSBEiJ_T0099659.1 MGP_WSBEiJ_G0038322.1 mouse_genomes_project 6 70702939 70703075 + Gm23346 snoRNA snoRNA MGP_WSBEiJ_T0076547.1 MGP_WSBEiJ_G0029987.1 mouse_genomes_project 6 57397710 57398763 - MGP_WSBEiJ_P0076547 Vmn1r25 protein_coding protein_coding MGP_WSBEiJ_T0075390.1 MGP_WSBEiJ_G0029695.1 mouse_genomes_project 6 26724339 26728183 - MGP_WSBEiJ_P0075390 Opn1sw protein_coding protein_coding MGP_WSBEiJ_T0075391.1 MGP_WSBEiJ_G0029695.1 mouse_genomes_project 6 26725052 26728101 - MGP_WSBEiJ_P0075391 Opn1sw protein_coding protein_coding MGP_WSBEiJ_T0075392.1 MGP_WSBEiJ_G0029695.1 mouse_genomes_project 6 26726600 26728083 - Opn1sw protein_coding processed_transcript MGP_WSBEiJ_T0075393.1 MGP_WSBEiJ_G0029695.1 mouse_genomes_project 6 26727042 26736126 - MGP_WSBEiJ_P0075393 Opn1sw protein_coding protein_coding MGP_WSBEiJ_T0008356.1 MGP_WSBEiJ_G0006780.1 mouse_genomes_project 6 1542358 1542738 - Gm20714 lincRNA lincRNA MGP_WSBEiJ_T0008357.1 MGP_WSBEiJ_G0006780.1 mouse_genomes_project 6 1542358 1554331 - Gm20714 lincRNA lincRNA MGP_WSBEiJ_T0008358.1 MGP_WSBEiJ_G0006780.1 mouse_genomes_project 6 1542360 1549699 - Gm20714 lincRNA lincRNA MGP_WSBEiJ_T0015022.1 MGP_WSBEiJ_G0013152.1 mouse_genomes_project 6 94060325 94061312 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001883.1 MGP_WSBEiJ_G0001803.1 mouse_genomes_project 6 12751065 12752706 + TEC TEC MGP_WSBEiJ_T0078602.1 MGP_WSBEiJ_G0030388.1 mouse_genomes_project 6 123088593 123191753 - MGP_WSBEiJ_P0078602 Iqsec3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078603.1 MGP_WSBEiJ_G0030388.1 mouse_genomes_project 6 123088593 123191711 - MGP_WSBEiJ_P0078603 Iqsec3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078604.1 MGP_WSBEiJ_G0030388.1 mouse_genomes_project 6 123088593 123191766 - MGP_WSBEiJ_P0078604 Iqsec3 protein_coding protein_coding MGP_WSBEiJ_T0078605.1 MGP_WSBEiJ_G0030388.1 mouse_genomes_project 6 123095481 123191651 - MGP_WSBEiJ_P0078605 Iqsec3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078606.1 MGP_WSBEiJ_G0030388.1 mouse_genomes_project 6 123120156 123191766 - MGP_WSBEiJ_P0078606 Iqsec3 protein_coding protein_coding MGP_WSBEiJ_T0014992.1 MGP_WSBEiJ_G0013122.1 mouse_genomes_project 6 82187407 82188092 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076015.1 MGP_WSBEiJ_G0029839.1 mouse_genomes_project 6 40789703 40790636 + MGP_WSBEiJ_P0076015 Olfr450 protein_coding protein_coding MGP_WSBEiJ_T0076700.1 MGP_WSBEiJ_G0030023.1 mouse_genomes_project 6 70994760 71010978 - MGP_WSBEiJ_P0076700 Thnsl2 protein_coding protein_coding MGP_WSBEiJ_T0076701.1 MGP_WSBEiJ_G0030023.1 mouse_genomes_project 6 70994992 71010886 - MGP_WSBEiJ_P0076701 Thnsl2 protein_coding protein_coding MGP_WSBEiJ_T0076702.1 MGP_WSBEiJ_G0030023.1 mouse_genomes_project 6 70995250 70998575 - MGP_WSBEiJ_P0076702 Thnsl2 protein_coding protein_coding MGP_WSBEiJ_T0076703.1 MGP_WSBEiJ_G0030023.1 mouse_genomes_project 6 70998368 71010870 - Thnsl2 protein_coding processed_transcript MGP_WSBEiJ_T0002055.1 MGP_WSBEiJ_G0001975.1 mouse_genomes_project 6 101348834 101349226 - TEC TEC MGP_WSBEiJ_T0002048.1 MGP_WSBEiJ_G0001968.1 mouse_genomes_project 6 94122589 94125413 + TEC TEC MGP_WSBEiJ_T0008583.1 MGP_WSBEiJ_G0006944.1 mouse_genomes_project 6 122960890 122980494 - Gm44148 lincRNA lincRNA MGP_WSBEiJ_T0078732.1 MGP_WSBEiJ_G0030424.1 mouse_genomes_project 6 126694536 126728857 - MGP_WSBEiJ_P0078732 protein_coding protein_coding MGP_WSBEiJ_T0014979.1 MGP_WSBEiJ_G0013109.1 mouse_genomes_project 6 73899745 73899931 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075752.1 MGP_WSBEiJ_G0029754.1 mouse_genomes_project 6 35723000 35726073 - Atp6v0a4 protein_coding processed_transcript MGP_WSBEiJ_T0075753.1 MGP_WSBEiJ_G0029754.1 mouse_genomes_project 6 35723000 35788965 - MGP_WSBEiJ_P0075753 Atp6v0a4 protein_coding protein_coding MGP_WSBEiJ_T0075754.1 MGP_WSBEiJ_G0029754.1 mouse_genomes_project 6 35723000 35805739 - MGP_WSBEiJ_P0075754 Atp6v0a4 protein_coding protein_coding MGP_WSBEiJ_T0075755.1 MGP_WSBEiJ_G0029754.1 mouse_genomes_project 6 35725792 35731222 - Atp6v0a4 protein_coding retained_intron MGP_WSBEiJ_T0075756.1 MGP_WSBEiJ_G0029754.1 mouse_genomes_project 6 35756182 35760636 - Atp6v0a4 protein_coding retained_intron MGP_WSBEiJ_T0075757.1 MGP_WSBEiJ_G0029754.1 mouse_genomes_project 6 35765918 35774394 - Atp6v0a4 protein_coding retained_intron MGP_WSBEiJ_T0075758.1 MGP_WSBEiJ_G0029754.1 mouse_genomes_project 6 35770885 35805642 - Atp6v0a4 protein_coding retained_intron MGP_WSBEiJ_T0008369.1 MGP_WSBEiJ_G0006785.1 mouse_genomes_project 6 3768301 3772783 - Gm26774 lincRNA lincRNA MGP_WSBEiJ_T0079297.1 MGP_WSBEiJ_G0030572.1 mouse_genomes_project 6 138090700 138119207 + MGP_WSBEiJ_P0079297 Crebl2 protein_coding protein_coding MGP_WSBEiJ_T0079298.1 MGP_WSBEiJ_G0030572.1 mouse_genomes_project 6 138090774 138109876 + Crebl2 protein_coding retained_intron MGP_WSBEiJ_T0079299.1 MGP_WSBEiJ_G0030572.1 mouse_genomes_project 6 138090801 138116440 + MGP_WSBEiJ_P0079299 Crebl2 protein_coding protein_coding MGP_WSBEiJ_T0079300.1 MGP_WSBEiJ_G0030572.1 mouse_genomes_project 6 138111462 138114888 + Crebl2 protein_coding retained_intron MGP_WSBEiJ_T0078539.1 MGP_WSBEiJ_G0030377.1 mouse_genomes_project 6 122342103 122398950 + Cecr2 protein_coding retained_intron MGP_WSBEiJ_T0078540.1 MGP_WSBEiJ_G0030377.1 mouse_genomes_project 6 122342155 122448297 + MGP_WSBEiJ_P0078540 Cecr2 protein_coding protein_coding MGP_WSBEiJ_T0078541.1 MGP_WSBEiJ_G0030377.1 mouse_genomes_project 6 122342269 122398778 + Cecr2 protein_coding processed_transcript MGP_WSBEiJ_T0078542.1 MGP_WSBEiJ_G0030377.1 mouse_genomes_project 6 122342316 122444012 + MGP_WSBEiJ_P0078542 Cecr2 protein_coding protein_coding MGP_WSBEiJ_T0078543.1 MGP_WSBEiJ_G0030377.1 mouse_genomes_project 6 122410071 122433771 + Cecr2 protein_coding processed_transcript MGP_WSBEiJ_T0078544.1 MGP_WSBEiJ_G0030377.1 mouse_genomes_project 6 122410138 122432646 + MGP_WSBEiJ_P0078544 Cecr2 protein_coding protein_coding MGP_WSBEiJ_T0078545.1 MGP_WSBEiJ_G0030377.1 mouse_genomes_project 6 122411269 122415264 + Cecr2 protein_coding retained_intron MGP_WSBEiJ_T0078546.1 MGP_WSBEiJ_G0030377.1 mouse_genomes_project 6 122435226 122438813 + MGP_WSBEiJ_P0078546 Cecr2 protein_coding protein_coding MGP_WSBEiJ_T0100916.1 MGP_WSBEiJ_G0039374.1 mouse_genomes_project 6 66084979 66085878 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0076942.1 MGP_WSBEiJ_G0030073.1 mouse_genomes_project 6 82730947 82733978 + Tacr1 protein_coding retained_intron MGP_WSBEiJ_T0076943.1 MGP_WSBEiJ_G0030073.1 mouse_genomes_project 6 82731088 82905553 + MGP_WSBEiJ_P0076943 Tacr1 protein_coding protein_coding MGP_WSBEiJ_T0076944.1 MGP_WSBEiJ_G0030073.1 mouse_genomes_project 6 82731400 82905558 + MGP_WSBEiJ_P0076944 Tacr1 protein_coding protein_coding MGP_WSBEiJ_T0100310.1 MGP_WSBEiJ_G0038809.1 mouse_genomes_project 6 133229468 133246986 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0075603.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 30738419 31490373 + MGP_WSBEiJ_P0075603 Exoc4 protein_coding protein_coding MGP_WSBEiJ_T0075604.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 30738462 30847509 + Exoc4 protein_coding retained_intron MGP_WSBEiJ_T0075605.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 30738462 31314628 + Exoc4 protein_coding processed_transcript MGP_WSBEiJ_T0075606.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 30738462 30986584 + MGP_WSBEiJ_P0075606 Exoc4 protein_coding protein_coding MGP_WSBEiJ_T0075607.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 30738466 31088844 + MGP_WSBEiJ_P0075607 Exoc4 protein_coding protein_coding MGP_WSBEiJ_T0075608.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 30738470 30811749 + Exoc4 protein_coding processed_transcript MGP_WSBEiJ_T0075609.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 30826347 31010167 + Exoc4 protein_coding processed_transcript MGP_WSBEiJ_T0075610.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 30827409 30844729 + Exoc4 protein_coding retained_intron MGP_WSBEiJ_T0075611.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 31205644 31368368 + Exoc4 protein_coding processed_transcript MGP_WSBEiJ_T0075612.1 MGP_WSBEiJ_G0029727.1 mouse_genomes_project 6 31368307 31382328 + Exoc4 protein_coding processed_transcript MGP_WSBEiJ_T0004984.1 MGP_WSBEiJ_G0004249.1 mouse_genomes_project 6 115081088 115083206 - Gm44199 antisense antisense MGP_WSBEiJ_T0000152.1 MGP_WSBEiJ_G0000115.1 mouse_genomes_project 6 67355678 67356152 - MGP_WSBEiJ_P0000152 IG_V_gene IG_V_gene MGP_WSBEiJ_T0011453.1 MGP_WSBEiJ_G0009610.1 mouse_genomes_project 6 50752507 50752868 + Gm27383 misc_RNA misc_RNA MGP_WSBEiJ_T0098417.1 MGP_WSBEiJ_G0037080.1 mouse_genomes_project 6 46521212 46521412 + Gm22122 snRNA snRNA MGP_WSBEiJ_T0002040.1 MGP_WSBEiJ_G0001960.1 mouse_genomes_project 6 92537235 92538261 - TEC TEC MGP_WSBEiJ_T0077000.1 MGP_WSBEiJ_G0030084.1 mouse_genomes_project 6 83450741 83451861 + MGP_WSBEiJ_P0077000 Pcgf1 protein_coding protein_coding MGP_WSBEiJ_T0077001.1 MGP_WSBEiJ_G0030084.1 mouse_genomes_project 6 83451218 83453721 + MGP_WSBEiJ_P0077001 Pcgf1 protein_coding protein_coding MGP_WSBEiJ_T0077002.1 MGP_WSBEiJ_G0030084.1 mouse_genomes_project 6 83451294 83453728 + MGP_WSBEiJ_P0077002 Pcgf1 protein_coding protein_coding MGP_WSBEiJ_T0077003.1 MGP_WSBEiJ_G0030084.1 mouse_genomes_project 6 83451502 83453623 + MGP_WSBEiJ_P0077003 Pcgf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077004.1 MGP_WSBEiJ_G0030084.1 mouse_genomes_project 6 83451563 83453623 + MGP_WSBEiJ_P0077004 Pcgf1 protein_coding protein_coding MGP_WSBEiJ_T0077005.1 MGP_WSBEiJ_G0030084.1 mouse_genomes_project 6 83451590 83452576 + Pcgf1 protein_coding retained_intron MGP_WSBEiJ_T0077006.1 MGP_WSBEiJ_G0030084.1 mouse_genomes_project 6 83452885 83453720 + Pcgf1 protein_coding retained_intron MGP_WSBEiJ_T0014904.1 MGP_WSBEiJ_G0013034.1 mouse_genomes_project 6 56989992 56991164 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002147.1 MGP_WSBEiJ_G0002066.1 mouse_genomes_project 6 153177519 153180654 - TEC TEC MGP_WSBEiJ_T0076012.1 MGP_WSBEiJ_G0029836.1 mouse_genomes_project 6 40713388 40714342 + MGP_WSBEiJ_P0076012 Olfr453 protein_coding protein_coding MGP_WSBEiJ_T0076319.1 MGP_WSBEiJ_G0029917.1 mouse_genomes_project 6 50675393 50677476 - MGP_WSBEiJ_P0076319 Hoxa4 protein_coding protein_coding MGP_WSBEiJ_T0008537.1 MGP_WSBEiJ_G0006905.1 mouse_genomes_project 6 91297833 91330317 + lincRNA lincRNA MGP_WSBEiJ_T0096837.1 MGP_WSBEiJ_G0035518.1 mouse_genomes_project 6 68380864 68381146 - pseudogene pseudogene MGP_WSBEiJ_T0008650.1 MGP_WSBEiJ_G0006992.1 mouse_genomes_project 6 152867551 152870021 + Gm26540 lincRNA lincRNA MGP_WSBEiJ_T0077329.1 MGP_WSBEiJ_G0030145.1 mouse_genomes_project 6 87065698 87085820 + MGP_WSBEiJ_P0077329 Gm44790 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077180.1 MGP_WSBEiJ_G0030115.1 mouse_genomes_project 6 85101288 85550028 - MGP_WSBEiJ_P0077180 Exoc6b protein_coding protein_coding MGP_WSBEiJ_T0077181.1 MGP_WSBEiJ_G0030115.1 mouse_genomes_project 6 85301731 85550028 - Exoc6b protein_coding retained_intron MGP_WSBEiJ_T0077182.1 MGP_WSBEiJ_G0030115.1 mouse_genomes_project 6 85302675 85549972 - Exoc6b protein_coding retained_intron MGP_WSBEiJ_T0077183.1 MGP_WSBEiJ_G0030115.1 mouse_genomes_project 6 85320365 85550017 - MGP_WSBEiJ_P0077183 Exoc6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077184.1 MGP_WSBEiJ_G0030115.1 mouse_genomes_project 6 85362739 85366721 - Exoc6b protein_coding retained_intron MGP_WSBEiJ_T0077185.1 MGP_WSBEiJ_G0030115.1 mouse_genomes_project 6 85421018 85550017 - Exoc6b protein_coding processed_transcript MGP_WSBEiJ_T0077186.1 MGP_WSBEiJ_G0030115.1 mouse_genomes_project 6 85462832 85549983 - Exoc6b protein_coding retained_intron MGP_WSBEiJ_T0077187.1 MGP_WSBEiJ_G0030115.1 mouse_genomes_project 6 85482980 85549990 - Exoc6b protein_coding retained_intron MGP_WSBEiJ_T0004906.1 MGP_WSBEiJ_G0004206.1 mouse_genomes_project 6 83480456 83482903 - Ccdc142os antisense antisense MGP_WSBEiJ_T0004907.1 MGP_WSBEiJ_G0004206.1 mouse_genomes_project 6 83480467 83482902 - Ccdc142os antisense antisense MGP_WSBEiJ_T0004908.1 MGP_WSBEiJ_G0004206.1 mouse_genomes_project 6 83480715 83482836 - Ccdc142os antisense antisense MGP_WSBEiJ_T0004909.1 MGP_WSBEiJ_G0004206.1 mouse_genomes_project 6 83481595 83482903 - Ccdc142os antisense antisense MGP_WSBEiJ_T0014884.1 MGP_WSBEiJ_G0013014.1 mouse_genomes_project 6 47575049 47575614 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002636.1 MGP_WSBEiJ_G0002522.1 mouse_genomes_project 6 39447517 39448201 - MGP_WSBEiJ_P0002636 Trbv31 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002637.1 MGP_WSBEiJ_G0002522.1 mouse_genomes_project 6 39447519 39448282 - MGP_WSBEiJ_P0002637 Trbv31 TR_V_gene TR_V_gene MGP_WSBEiJ_T0014937.1 MGP_WSBEiJ_G0013067.1 mouse_genomes_project 6 65043728 65044115 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011418.1 MGP_WSBEiJ_G0009575.1 mouse_genomes_project 6 1085991 1086318 + Gm24442 misc_RNA misc_RNA MGP_WSBEiJ_T0015164.1 MGP_WSBEiJ_G0013294.1 mouse_genomes_project 6 136283123 136283469 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078234.1 MGP_WSBEiJ_G0030324.1 mouse_genomes_project 6 117166491 117197957 - MGP_WSBEiJ_P0078234 Tmem40 protein_coding protein_coding MGP_WSBEiJ_T0078235.1 MGP_WSBEiJ_G0030324.1 mouse_genomes_project 6 117166498 117203539 - MGP_WSBEiJ_P0078235 Tmem40 protein_coding protein_coding MGP_WSBEiJ_T0078236.1 MGP_WSBEiJ_G0030324.1 mouse_genomes_project 6 117166503 117171695 - Tmem40 protein_coding processed_transcript MGP_WSBEiJ_T0078237.1 MGP_WSBEiJ_G0030324.1 mouse_genomes_project 6 117166893 117172036 - Tmem40 protein_coding retained_intron MGP_WSBEiJ_T0098446.1 MGP_WSBEiJ_G0037109.1 mouse_genomes_project 6 126842017 126842079 - Rnu7 snRNA snRNA MGP_WSBEiJ_T0075976.1 MGP_WSBEiJ_G0029823.1 mouse_genomes_project 6 40273036 40282367 - MGP_WSBEiJ_P0075976 Fam131b protein_coding protein_coding MGP_WSBEiJ_T0075977.1 MGP_WSBEiJ_G0029823.1 mouse_genomes_project 6 40275884 40282196 - MGP_WSBEiJ_P0075977 Fam131b protein_coding protein_coding MGP_WSBEiJ_T0000300.1 MGP_WSBEiJ_G0000248.1 mouse_genomes_project 6 70188460 70188682 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0076175.1 MGP_WSBEiJ_G0029884.1 mouse_genomes_project 6 46977880 46983876 + MGP_WSBEiJ_P0076175 Gimap7 protein_coding protein_coding MGP_WSBEiJ_T0076177.1 MGP_WSBEiJ_G0029884.1 mouse_genomes_project 6 46977916 46982979 + MGP_WSBEiJ_P0076177 Gimap7 protein_coding protein_coding MGP_WSBEiJ_T0076178.1 MGP_WSBEiJ_G0029884.1 mouse_genomes_project 6 46977924 46978916 + Gimap7 protein_coding retained_intron MGP_WSBEiJ_T0008497.1 MGP_WSBEiJ_G0006876.1 mouse_genomes_project 6 72985778 72989791 + Gm26640 lincRNA lincRNA MGP_WSBEiJ_T0075198.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15362318 15424234 - Cttnbp2 protein_coding retained_intron MGP_WSBEiJ_T0075199.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15362405 15430504 - MGP_WSBEiJ_P0075199 Cttnbp2 protein_coding protein_coding MGP_WSBEiJ_T0075200.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15362547 15519370 - MGP_WSBEiJ_P0075200 Cttnbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075201.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15363062 15519442 - MGP_WSBEiJ_P0075201 Cttnbp2 protein_coding protein_coding MGP_WSBEiJ_T0075202.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15385533 15404641 - MGP_WSBEiJ_P0075202 Cttnbp2 protein_coding protein_coding MGP_WSBEiJ_T0075203.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15427992 15519420 - Cttnbp2 protein_coding retained_intron MGP_WSBEiJ_T0075204.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15431303 15517714 - MGP_WSBEiJ_P0075204 Cttnbp2 protein_coding protein_coding MGP_WSBEiJ_T0075205.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15444734 15505208 - MGP_WSBEiJ_P0075205 Cttnbp2 protein_coding protein_coding MGP_WSBEiJ_T0075206.1 MGP_WSBEiJ_G0029650.1 mouse_genomes_project 6 15504777 15519464 - Cttnbp2 protein_coding retained_intron MGP_WSBEiJ_T0001990.1 MGP_WSBEiJ_G0001910.1 mouse_genomes_project 6 80549435 80552979 + TEC TEC MGP_WSBEiJ_T0008408.1 MGP_WSBEiJ_G0006811.1 mouse_genomes_project 6 28802464 28836263 - Mkln1os lincRNA lincRNA MGP_WSBEiJ_T0008410.1 MGP_WSBEiJ_G0006811.1 mouse_genomes_project 6 28820067 28836243 - Mkln1os lincRNA lincRNA MGP_WSBEiJ_T0008411.1 MGP_WSBEiJ_G0006811.1 mouse_genomes_project 6 28821714 28836249 - Mkln1os lincRNA lincRNA MGP_WSBEiJ_T0100122.1 MGP_WSBEiJ_G0038719.1 mouse_genomes_project 6 31964845 31983105 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100123.1 MGP_WSBEiJ_G0038719.1 mouse_genomes_project 6 31965000 31980334 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100124.1 MGP_WSBEiJ_G0038719.1 mouse_genomes_project 6 31980302 31980475 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100125.1 MGP_WSBEiJ_G0038719.1 mouse_genomes_project 6 31980740 31983106 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0015125.1 MGP_WSBEiJ_G0013255.1 mouse_genomes_project 6 129162436 129163330 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011432.1 MGP_WSBEiJ_G0009589.1 mouse_genomes_project 6 16039053 16039368 + Gm22718 misc_RNA misc_RNA MGP_WSBEiJ_T0000186.1 MGP_WSBEiJ_G0000140.1 mouse_genomes_project 6 69698893 69699455 - MGP_WSBEiJ_P0000186 Igkv5-37 IG_V_gene IG_V_gene MGP_WSBEiJ_T0015199.1 MGP_WSBEiJ_G0013329.1 mouse_genomes_project 6 153319972 153320838 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078137.1 MGP_WSBEiJ_G0030308.1 mouse_genomes_project 6 115206157 115221243 - MGP_WSBEiJ_P0078137 Sec13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078138.1 MGP_WSBEiJ_G0030308.1 mouse_genomes_project 6 115208621 115221339 - MGP_WSBEiJ_P0078138 Sec13 protein_coding protein_coding MGP_WSBEiJ_T0078139.1 MGP_WSBEiJ_G0030308.1 mouse_genomes_project 6 115211025 115215666 - Sec13 protein_coding retained_intron MGP_WSBEiJ_T0078140.1 MGP_WSBEiJ_G0030308.1 mouse_genomes_project 6 115211191 115215666 - Sec13 protein_coding retained_intron MGP_WSBEiJ_T0078141.1 MGP_WSBEiJ_G0030308.1 mouse_genomes_project 6 115219724 115221323 - Sec13 protein_coding retained_intron MGP_WSBEiJ_T0076508.1 MGP_WSBEiJ_G0029963.1 mouse_genomes_project 6 55790580 55793748 + MGP_WSBEiJ_P0076508 protein_coding protein_coding MGP_WSBEiJ_T0076650.1 MGP_WSBEiJ_G0030010.1 mouse_genomes_project 6 66116215 66117251 - MGP_WSBEiJ_P0076650 Vmn1r38 protein_coding protein_coding MGP_WSBEiJ_T0008589.1 MGP_WSBEiJ_G0006950.1 mouse_genomes_project 6 128540746 128543055 + Gm29009 lincRNA lincRNA MGP_WSBEiJ_T0002512.1 MGP_WSBEiJ_G0002422.1 mouse_genomes_project 6 39421727 39421775 + MGP_WSBEiJ_P0002512 Trbj1-1 TR_J_gene TR_J_gene MGP_WSBEiJ_T0015112.1 MGP_WSBEiJ_G0013242.1 mouse_genomes_project 6 124447396 124448156 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001966.1 MGP_WSBEiJ_G0001886.1 mouse_genomes_project 6 71721433 71722696 + TEC TEC MGP_WSBEiJ_T0014976.1 MGP_WSBEiJ_G0013106.1 mouse_genomes_project 6 73016311 73016897 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008495.1 MGP_WSBEiJ_G0006874.1 mouse_genomes_project 6 71934777 71966613 - 9130221F21Rik lincRNA lincRNA MGP_WSBEiJ_T0014825.1 MGP_WSBEiJ_G0012955.1 mouse_genomes_project 6 21331507 21333529 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014952.1 MGP_WSBEiJ_G0013082.1 mouse_genomes_project 6 66770173 66770594 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079182.1 MGP_WSBEiJ_G0030519.1 mouse_genomes_project 6 132102425 132111644 + MGP_WSBEiJ_P0079182 Gabarapl1 protein_coding protein_coding MGP_WSBEiJ_T0076434.1 MGP_WSBEiJ_G0029942.1 mouse_genomes_project 6 53659078 53702555 + MGP_WSBEiJ_P0076434 Gars protein_coding protein_coding MGP_WSBEiJ_T0076435.1 MGP_WSBEiJ_G0029942.1 mouse_genomes_project 6 53669179 53673901 + Gars protein_coding retained_intron MGP_WSBEiJ_T0076436.1 MGP_WSBEiJ_G0029942.1 mouse_genomes_project 6 53673029 53684459 + Gars protein_coding retained_intron MGP_WSBEiJ_T0000286.1 MGP_WSBEiJ_G0000234.1 mouse_genomes_project 6 68513778 68514177 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0004966.1 MGP_WSBEiJ_G0004239.1 mouse_genomes_project 6 102317135 102467164 + Gm43948 antisense antisense MGP_WSBEiJ_T0076820.1 MGP_WSBEiJ_G0030045.1 mouse_genomes_project 6 72329793 72333127 - MGP_WSBEiJ_P0076820 Vamp5 protein_coding protein_coding MGP_WSBEiJ_T0076821.1 MGP_WSBEiJ_G0030045.1 mouse_genomes_project 6 72330022 72342251 - MGP_WSBEiJ_P0076821 Vamp5 protein_coding protein_coding MGP_WSBEiJ_T0076822.1 MGP_WSBEiJ_G0030045.1 mouse_genomes_project 6 72330028 72342297 - MGP_WSBEiJ_P0076822 Vamp5 protein_coding protein_coding MGP_WSBEiJ_T0004924.1 MGP_WSBEiJ_G0004214.1 mouse_genomes_project 6 85396177 85400059 + Gm44012 antisense antisense MGP_WSBEiJ_T0076787.1 MGP_WSBEiJ_G0030039.1 mouse_genomes_project 6 72159171 72190300 - MGP_WSBEiJ_P0076787 Atoh8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076788.1 MGP_WSBEiJ_G0030039.1 mouse_genomes_project 6 72159171 72191340 - MGP_WSBEiJ_P0076788 Atoh8 protein_coding protein_coding MGP_WSBEiJ_T0076789.1 MGP_WSBEiJ_G0030039.1 mouse_genomes_project 6 72179676 72190993 - Atoh8 protein_coding processed_transcript MGP_WSBEiJ_T0002106.1 MGP_WSBEiJ_G0002025.1 mouse_genomes_project 6 130746561 130747285 + TEC TEC MGP_WSBEiJ_T0075765.1 MGP_WSBEiJ_G0029757.1 mouse_genomes_project 6 35971862 35984567 - MGP_WSBEiJ_P0075765 Zc3hav1l protein_coding protein_coding MGP_WSBEiJ_T0005015.1 MGP_WSBEiJ_G0004278.1 mouse_genomes_project 6 130750774 130770437 - Gm15862 antisense antisense MGP_WSBEiJ_T0015007.1 MGP_WSBEiJ_G0013137.1 mouse_genomes_project 6 86065622 86066091 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004865.1 MGP_WSBEiJ_G0004175.1 mouse_genomes_project 6 41279642 41280942 - Gm44731 antisense antisense MGP_WSBEiJ_T0005006.1 MGP_WSBEiJ_G0004270.1 mouse_genomes_project 6 128935693 128958759 + Gm26673 antisense antisense MGP_WSBEiJ_T0015146.1 MGP_WSBEiJ_G0013276.1 mouse_genomes_project 6 134200162 134200898 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099664.1 MGP_WSBEiJ_G0038327.1 mouse_genomes_project 6 84253651 84253781 - Gm23014 snoRNA snoRNA MGP_WSBEiJ_T0000159.1 MGP_WSBEiJ_G0000121.1 mouse_genomes_project 6 68070011 68070509 + MGP_WSBEiJ_P0000159 Igkv16-104 IG_V_gene IG_V_gene MGP_WSBEiJ_T0077120.1 MGP_WSBEiJ_G0030109.1 mouse_genomes_project 6 84181886 84189532 - MGP_WSBEiJ_P0077120 Tex261 protein_coding protein_coding MGP_WSBEiJ_T0077121.1 MGP_WSBEiJ_G0030109.1 mouse_genomes_project 6 84183412 84189509 - Tex261 protein_coding retained_intron MGP_WSBEiJ_T0077122.1 MGP_WSBEiJ_G0030109.1 mouse_genomes_project 6 84184186 84185475 - Tex261 protein_coding retained_intron MGP_WSBEiJ_T0077123.1 MGP_WSBEiJ_G0030109.1 mouse_genomes_project 6 84186606 84189477 - Tex261 protein_coding retained_intron MGP_WSBEiJ_T0008516.1 MGP_WSBEiJ_G0006890.1 mouse_genomes_project 6 86613178 86618145 + 4930553P18Rik lincRNA lincRNA MGP_WSBEiJ_T0078948.1 MGP_WSBEiJ_G0030460.1 mouse_genomes_project 6 127368413 127372804 - MGP_WSBEiJ_P0078948 Cd27 protein_coding protein_coding MGP_WSBEiJ_T0078949.1 MGP_WSBEiJ_G0030460.1 mouse_genomes_project 6 127368946 127372788 - MGP_WSBEiJ_P0078949 Cd27 protein_coding protein_coding MGP_WSBEiJ_T0078950.1 MGP_WSBEiJ_G0030460.1 mouse_genomes_project 6 127369017 127372747 - MGP_WSBEiJ_P0078950 Cd27 protein_coding protein_coding MGP_WSBEiJ_T0078951.1 MGP_WSBEiJ_G0030460.1 mouse_genomes_project 6 127369351 127370610 - Cd27 protein_coding retained_intron MGP_WSBEiJ_T0078952.1 MGP_WSBEiJ_G0030460.1 mouse_genomes_project 6 127369487 127370470 - Cd27 protein_coding retained_intron MGP_WSBEiJ_T0078953.1 MGP_WSBEiJ_G0030460.1 mouse_genomes_project 6 127371901 127372797 - Cd27 protein_coding retained_intron MGP_WSBEiJ_T0008448.1 MGP_WSBEiJ_G0006836.1 mouse_genomes_project 6 46785643 46786536 - 1700026J14Rik lincRNA lincRNA MGP_WSBEiJ_T0077110.1 MGP_WSBEiJ_G0030105.1 mouse_genomes_project 6 84077337 84083980 - MGP_WSBEiJ_P0077110 Cd207 protein_coding protein_coding MGP_WSBEiJ_T0075886.1 MGP_WSBEiJ_G0029783.1 mouse_genomes_project 6 38331446 38332515 + MGP_WSBEiJ_P0075886 protein_coding protein_coding MGP_WSBEiJ_T0075999.1 MGP_WSBEiJ_G0029833.1 mouse_genomes_project 6 40552456 40556105 - Tcaf3 protein_coding processed_transcript MGP_WSBEiJ_T0076000.1 MGP_WSBEiJ_G0029833.1 mouse_genomes_project 6 40555688 40565703 - MGP_WSBEiJ_P0076000 Tcaf3 protein_coding protein_coding MGP_WSBEiJ_T0076001.1 MGP_WSBEiJ_G0029833.1 mouse_genomes_project 6 40562484 40566023 - MGP_WSBEiJ_P0076001 Tcaf3 protein_coding protein_coding MGP_WSBEiJ_T0079408.1 MGP_WSBEiJ_G0030599.1 mouse_genomes_project 6 140483460 140607043 - MGP_WSBEiJ_P0079408 Rerg protein_coding protein_coding MGP_WSBEiJ_T0079409.1 MGP_WSBEiJ_G0030599.1 mouse_genomes_project 6 140483466 140606265 - MGP_WSBEiJ_P0079409 Rerg protein_coding protein_coding MGP_WSBEiJ_T0079410.1 MGP_WSBEiJ_G0030599.1 mouse_genomes_project 6 140484739 140606218 - MGP_WSBEiJ_P0079410 Rerg protein_coding protein_coding MGP_WSBEiJ_T0079411.1 MGP_WSBEiJ_G0030599.1 mouse_genomes_project 6 140485029 140576475 - MGP_WSBEiJ_P0079411 Rerg protein_coding protein_coding MGP_WSBEiJ_T0079412.1 MGP_WSBEiJ_G0030599.1 mouse_genomes_project 6 140554073 140606241 - MGP_WSBEiJ_P0079412 Rerg protein_coding protein_coding MGP_WSBEiJ_T0014908.1 MGP_WSBEiJ_G0013038.1 mouse_genomes_project 6 57501889 57502150 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001865.1 MGP_WSBEiJ_G0001785.1 mouse_genomes_project 6 9666 13560 - TEC TEC MGP_WSBEiJ_T0078659.1 MGP_WSBEiJ_G0030399.1 mouse_genomes_project 6 124492874 124497547 - MGP_WSBEiJ_P0078659 Gdf3 protein_coding protein_coding MGP_WSBEiJ_T0078660.1 MGP_WSBEiJ_G0030399.1 mouse_genomes_project 6 124495486 124497284 - Gdf3 protein_coding processed_transcript MGP_WSBEiJ_T0098447.1 MGP_WSBEiJ_G0037110.1 mouse_genomes_project 6 127085263 127085366 + Gm23851 snRNA snRNA MGP_WSBEiJ_T0001921.1 MGP_WSBEiJ_G0001841.1 mouse_genomes_project 6 43224678 43227261 + TEC TEC MGP_WSBEiJ_T0077118.1 MGP_WSBEiJ_G0030108.1 mouse_genomes_project 6 84175646 84181328 + MGP_WSBEiJ_P0077118 Ankrd53 protein_coding protein_coding MGP_WSBEiJ_T0077119.1 MGP_WSBEiJ_G0030108.1 mouse_genomes_project 6 84175688 84181039 + MGP_WSBEiJ_P0077119 Ankrd53 protein_coding protein_coding MGP_WSBEiJ_T0077787.1 MGP_WSBEiJ_G0030244.1 mouse_genomes_project 6 98187013 98219444 - MGP_WSBEiJ_P0077787 Tmf1 protein_coding protein_coding MGP_WSBEiJ_T0077788.1 MGP_WSBEiJ_G0030244.1 mouse_genomes_project 6 98190586 98219359 - MGP_WSBEiJ_P0077788 Tmf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077789.1 MGP_WSBEiJ_G0030244.1 mouse_genomes_project 6 98195560 98204121 - Tmf1 protein_coding processed_transcript MGP_WSBEiJ_T0079754.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150679153 150823962 + MGP_WSBEiJ_P0079754 Ppfibp1 protein_coding protein_coding MGP_WSBEiJ_T0079755.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150679175 150767295 + MGP_WSBEiJ_P0079755 Ppfibp1 protein_coding protein_coding MGP_WSBEiJ_T0079756.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150679255 150823962 + MGP_WSBEiJ_P0079756 Ppfibp1 protein_coding protein_coding MGP_WSBEiJ_T0079759.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150765717 150784516 + MGP_WSBEiJ_P0079759 Ppfibp1 protein_coding protein_coding MGP_WSBEiJ_T0079760.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150784560 150797862 + MGP_WSBEiJ_P0079760 Ppfibp1 protein_coding protein_coding MGP_WSBEiJ_T0079761.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150788401 150794122 + Ppfibp1 protein_coding processed_transcript MGP_WSBEiJ_T0079762.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150791408 150823960 + Ppfibp1 protein_coding retained_intron MGP_WSBEiJ_T0079763.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150792177 150809366 + Ppfibp1 protein_coding retained_intron MGP_WSBEiJ_T0079764.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150793566 150797890 + Ppfibp1 protein_coding retained_intron MGP_WSBEiJ_T0079765.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150794115 150811103 + MGP_WSBEiJ_P0079765 Ppfibp1 protein_coding protein_coding MGP_WSBEiJ_T0079766.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150796982 150798211 + Ppfibp1 protein_coding retained_intron MGP_WSBEiJ_T0079767.1 MGP_WSBEiJ_G0030659.1 mouse_genomes_project 6 150802804 150811510 + MGP_WSBEiJ_P0079767 Ppfibp1 protein_coding protein_coding MGP_WSBEiJ_T0078038.1 MGP_WSBEiJ_G0030289.1 mouse_genomes_project 6 114786492 114796519 - MGP_WSBEiJ_P0078038 Camk1 protein_coding protein_coding MGP_WSBEiJ_T0078039.1 MGP_WSBEiJ_G0030289.1 mouse_genomes_project 6 114786496 114788990 - Camk1 protein_coding retained_intron MGP_WSBEiJ_T0078040.1 MGP_WSBEiJ_G0030289.1 mouse_genomes_project 6 114786505 114796439 - Camk1 protein_coding retained_intron MGP_WSBEiJ_T0078041.1 MGP_WSBEiJ_G0030289.1 mouse_genomes_project 6 114789083 114793055 - Camk1 protein_coding retained_intron MGP_WSBEiJ_T0078042.1 MGP_WSBEiJ_G0030289.1 mouse_genomes_project 6 114790260 114796513 - MGP_WSBEiJ_P0078042 Camk1 protein_coding protein_coding MGP_WSBEiJ_T0078043.1 MGP_WSBEiJ_G0030289.1 mouse_genomes_project 6 114793040 114796498 - Camk1 protein_coding retained_intron MGP_WSBEiJ_T0002066.1 MGP_WSBEiJ_G0001986.1 mouse_genomes_project 6 102834263 102836307 + TEC TEC MGP_WSBEiJ_T0001950.1 MGP_WSBEiJ_G0001870.1 mouse_genomes_project 6 53516340 53519653 + TEC TEC MGP_WSBEiJ_T0001881.1 MGP_WSBEiJ_G0001801.1 mouse_genomes_project 6 12541004 12543261 + TEC TEC MGP_WSBEiJ_T0014971.1 MGP_WSBEiJ_G0013101.1 mouse_genomes_project 6 71593938 71594526 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099677.1 MGP_WSBEiJ_G0038340.1 mouse_genomes_project 6 117843836 117843966 - Gm23527 snoRNA snoRNA MGP_WSBEiJ_T0076919.1 MGP_WSBEiJ_G0030069.1 mouse_genomes_project 6 80274635 81108106 + MGP_WSBEiJ_P0076919 Lrrtm4 protein_coding protein_coding MGP_WSBEiJ_T0076920.1 MGP_WSBEiJ_G0030069.1 mouse_genomes_project 6 80274646 80277546 + MGP_WSBEiJ_P0076920 Lrrtm4 protein_coding protein_coding MGP_WSBEiJ_T0076921.1 MGP_WSBEiJ_G0030069.1 mouse_genomes_project 6 80274676 80280714 + MGP_WSBEiJ_P0076921 Lrrtm4 protein_coding protein_coding MGP_WSBEiJ_T0076922.1 MGP_WSBEiJ_G0030069.1 mouse_genomes_project 6 80274676 81107286 + MGP_WSBEiJ_P0076922 Lrrtm4 protein_coding protein_coding MGP_WSBEiJ_T0076923.1 MGP_WSBEiJ_G0030069.1 mouse_genomes_project 6 80274769 81108104 + MGP_WSBEiJ_P0076923 Lrrtm4 protein_coding protein_coding MGP_WSBEiJ_T0076924.1 MGP_WSBEiJ_G0030069.1 mouse_genomes_project 6 80274806 80281699 + MGP_WSBEiJ_P0076924 Lrrtm4 protein_coding protein_coding MGP_WSBEiJ_T0076925.1 MGP_WSBEiJ_G0030069.1 mouse_genomes_project 6 80275096 80277713 + MGP_WSBEiJ_P0076925 Lrrtm4 protein_coding protein_coding MGP_WSBEiJ_T0076926.1 MGP_WSBEiJ_G0030069.1 mouse_genomes_project 6 80275419 80280722 + MGP_WSBEiJ_P0076926 Lrrtm4 protein_coding protein_coding MGP_WSBEiJ_T0010590.1 MGP_WSBEiJ_G0008747.1 mouse_genomes_project 6 34304080 34304227 + Gm25111 miRNA miRNA MGP_WSBEiJ_T0099670.1 MGP_WSBEiJ_G0038333.1 mouse_genomes_project 6 98198126 98198257 - Gm26175 snoRNA snoRNA MGP_WSBEiJ_T0075103.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 11783285 12344367 + MGP_WSBEiJ_P0075103 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075104.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 11783324 12314094 + Foxp2 protein_coding retained_intron MGP_WSBEiJ_T0075105.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 11783387 11869287 + Foxp2 protein_coding processed_transcript MGP_WSBEiJ_T0075106.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 11783413 12181528 + MGP_WSBEiJ_P0075106 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075107.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 11783414 12182510 + Foxp2 protein_coding retained_intron MGP_WSBEiJ_T0075108.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 11785404 12088029 + Foxp2 protein_coding processed_transcript MGP_WSBEiJ_T0075109.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12075086 12090418 + MGP_WSBEiJ_P0075109 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075110.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12075886 12340696 + MGP_WSBEiJ_P0075110 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075111.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12075886 12340415 + MGP_WSBEiJ_P0075111 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075112.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12075886 12343590 + MGP_WSBEiJ_P0075112 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075113.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12075943 12296997 + MGP_WSBEiJ_P0075113 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075114.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12088018 12300025 + Foxp2 protein_coding retained_intron MGP_WSBEiJ_T0075115.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12088020 12307832 + MGP_WSBEiJ_P0075115 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075116.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12088020 12277715 + MGP_WSBEiJ_P0075116 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075117.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12088033 12307832 + MGP_WSBEiJ_P0075117 Foxp2 protein_coding protein_coding MGP_WSBEiJ_T0075118.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12148394 12181528 + Foxp2 protein_coding processed_transcript MGP_WSBEiJ_T0075119.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12220519 12221700 + Foxp2 protein_coding retained_intron MGP_WSBEiJ_T0075120.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12274568 12275968 + Foxp2 protein_coding processed_transcript MGP_WSBEiJ_T0075121.1 MGP_WSBEiJ_G0029638.1 mouse_genomes_project 6 12274568 12341440 + MGP_WSBEiJ_P0075121 Foxp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0004957.1 MGP_WSBEiJ_G0004235.1 mouse_genomes_project 6 93857813 94205527 + antisense antisense MGP_WSBEiJ_T0004958.1 MGP_WSBEiJ_G0004235.1 mouse_genomes_project 6 93857853 94205437 + antisense antisense MGP_WSBEiJ_T0004959.1 MGP_WSBEiJ_G0004235.1 mouse_genomes_project 6 93858062 94032205 + antisense antisense MGP_WSBEiJ_T0004960.1 MGP_WSBEiJ_G0004235.1 mouse_genomes_project 6 93858066 94205525 + antisense antisense MGP_WSBEiJ_T0004961.1 MGP_WSBEiJ_G0004235.1 mouse_genomes_project 6 93858066 94032488 + antisense antisense MGP_WSBEiJ_T0004962.1 MGP_WSBEiJ_G0004235.1 mouse_genomes_project 6 93858066 94068952 + antisense antisense MGP_WSBEiJ_T0079089.1 MGP_WSBEiJ_G0030493.1 mouse_genomes_project 6 130769992 130779066 + MGP_WSBEiJ_P0079089 protein_coding protein_coding MGP_WSBEiJ_T0079090.1 MGP_WSBEiJ_G0030493.1 mouse_genomes_project 6 130770004 130778959 + MGP_WSBEiJ_P0079090 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079091.1 MGP_WSBEiJ_G0030493.1 mouse_genomes_project 6 130770462 130779775 + MGP_WSBEiJ_P0079091 protein_coding protein_coding MGP_WSBEiJ_T0079092.1 MGP_WSBEiJ_G0030493.1 mouse_genomes_project 6 130770662 130779775 + MGP_WSBEiJ_P0079092 protein_coding protein_coding MGP_WSBEiJ_T0079093.1 MGP_WSBEiJ_G0030493.1 mouse_genomes_project 6 130770740 130779775 + protein_coding retained_intron MGP_WSBEiJ_T0079094.1 MGP_WSBEiJ_G0030493.1 mouse_genomes_project 6 130770985 130787208 + MGP_WSBEiJ_P0079094 protein_coding non_stop_decay MGP_WSBEiJ_T0014985.1 MGP_WSBEiJ_G0013115.1 mouse_genomes_project 6 76614544 76615019 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077207.1 MGP_WSBEiJ_G0030121.1 mouse_genomes_project 6 85952360 85957254 + MGP_WSBEiJ_P0077207 Noto protein_coding protein_coding MGP_WSBEiJ_T0077208.1 MGP_WSBEiJ_G0030121.1 mouse_genomes_project 6 85952542 85956651 + MGP_WSBEiJ_P0077208 Noto protein_coding protein_coding MGP_WSBEiJ_T0008595.1 MGP_WSBEiJ_G0006956.1 mouse_genomes_project 6 131294666 131295280 - Gm44066 lincRNA lincRNA MGP_WSBEiJ_T0076950.1 MGP_WSBEiJ_G0030075.1 mouse_genomes_project 6 83078909 83128057 - MGP_WSBEiJ_P0076950 Hk2 protein_coding protein_coding MGP_WSBEiJ_T0076951.1 MGP_WSBEiJ_G0030075.1 mouse_genomes_project 6 83078946 83080224 - Hk2 protein_coding processed_transcript MGP_WSBEiJ_T0076952.1 MGP_WSBEiJ_G0030075.1 mouse_genomes_project 6 83113287 83127065 - MGP_WSBEiJ_P0076952 Hk2 protein_coding protein_coding MGP_WSBEiJ_T0014946.1 MGP_WSBEiJ_G0013076.1 mouse_genomes_project 6 66040844 66041298 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075585.1 MGP_WSBEiJ_G0029723.1 mouse_genomes_project 6 28957898 29005868 - MGP_WSBEiJ_P0075585 Podxl protein_coding protein_coding MGP_WSBEiJ_T0075586.1 MGP_WSBEiJ_G0029723.1 mouse_genomes_project 6 28962528 28963848 - Podxl protein_coding processed_transcript MGP_WSBEiJ_T0077960.1 MGP_WSBEiJ_G0030280.1 mouse_genomes_project 6 114049131 114122163 - MGP_WSBEiJ_P0077960 Rad18 protein_coding protein_coding MGP_WSBEiJ_T0077961.1 MGP_WSBEiJ_G0030280.1 mouse_genomes_project 6 114049226 114122081 - MGP_WSBEiJ_P0077961 Rad18 protein_coding protein_coding MGP_WSBEiJ_T0077962.1 MGP_WSBEiJ_G0030280.1 mouse_genomes_project 6 114049254 114122088 - MGP_WSBEiJ_P0077962 Rad18 protein_coding protein_coding MGP_WSBEiJ_T0077963.1 MGP_WSBEiJ_G0030280.1 mouse_genomes_project 6 114049256 114122147 - MGP_WSBEiJ_P0077963 Rad18 protein_coding protein_coding MGP_WSBEiJ_T0077964.1 MGP_WSBEiJ_G0030280.1 mouse_genomes_project 6 114050115 114100596 - MGP_WSBEiJ_P0077964 Rad18 protein_coding protein_coding MGP_WSBEiJ_T0077965.1 MGP_WSBEiJ_G0030280.1 mouse_genomes_project 6 114055664 114122125 - Rad18 protein_coding processed_transcript MGP_WSBEiJ_T0077966.1 MGP_WSBEiJ_G0030280.1 mouse_genomes_project 6 114075030 114122110 - MGP_WSBEiJ_P0077966 Rad18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077967.1 MGP_WSBEiJ_G0030280.1 mouse_genomes_project 6 114087863 114122121 - Rad18 protein_coding retained_intron MGP_WSBEiJ_T0078690.1 MGP_WSBEiJ_G0030411.1 mouse_genomes_project 6 125119780 125133134 + MGP_WSBEiJ_P0078690 Clec4n protein_coding protein_coding MGP_WSBEiJ_T0078691.1 MGP_WSBEiJ_G0030411.1 mouse_genomes_project 6 125119791 125133132 + MGP_WSBEiJ_P0078691 Clec4n protein_coding protein_coding MGP_WSBEiJ_T0078692.1 MGP_WSBEiJ_G0030411.1 mouse_genomes_project 6 125119794 125120773 + Clec4n protein_coding processed_transcript MGP_WSBEiJ_T0078693.1 MGP_WSBEiJ_G0030411.1 mouse_genomes_project 6 125119794 125133132 + MGP_WSBEiJ_P0078693 Clec4n protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078694.1 MGP_WSBEiJ_G0030411.1 mouse_genomes_project 6 125119794 125133132 + MGP_WSBEiJ_P0078694 Clec4n protein_coding protein_coding MGP_WSBEiJ_T0078695.1 MGP_WSBEiJ_G0030411.1 mouse_genomes_project 6 125119955 125132697 + MGP_WSBEiJ_P0078695 Clec4n protein_coding protein_coding MGP_WSBEiJ_T0008493.1 MGP_WSBEiJ_G0006872.1 mouse_genomes_project 6 71233508 71239985 - Gm44175 lincRNA lincRNA MGP_WSBEiJ_T0002009.1 MGP_WSBEiJ_G0001929.1 mouse_genomes_project 6 87322102 87324466 - TEC TEC MGP_WSBEiJ_T0017697.1 MGP_WSBEiJ_G0015063.1 mouse_genomes_project 6 96270521 96349893 - AY512915 processed_transcript antisense MGP_WSBEiJ_T0017698.1 MGP_WSBEiJ_G0015063.1 mouse_genomes_project 6 96292846 96349880 - AY512915 processed_transcript antisense MGP_WSBEiJ_T0017699.1 MGP_WSBEiJ_G0015063.1 mouse_genomes_project 6 96308305 96349895 - AY512915 processed_transcript lincRNA MGP_WSBEiJ_T0017700.1 MGP_WSBEiJ_G0015063.1 mouse_genomes_project 6 96325884 96349873 - AY512915 processed_transcript antisense MGP_WSBEiJ_T0017701.1 MGP_WSBEiJ_G0015063.1 mouse_genomes_project 6 96339692 96349879 - AY512915 processed_transcript processed_transcript MGP_WSBEiJ_T0015167.1 MGP_WSBEiJ_G0013297.1 mouse_genomes_project 6 138096379 138096788 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015121.1 MGP_WSBEiJ_G0013251.1 mouse_genomes_project 6 127344244 127344558 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015127.1 MGP_WSBEiJ_G0013257.1 mouse_genomes_project 6 129219358 129219636 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001996.1 MGP_WSBEiJ_G0001916.1 mouse_genomes_project 6 82220556 82222062 - TEC TEC MGP_WSBEiJ_T0078607.1 MGP_WSBEiJ_G0030389.1 mouse_genomes_project 6 123359705 123362784 + MGP_WSBEiJ_P0078607 A2m protein_coding protein_coding MGP_WSBEiJ_T0078608.1 MGP_WSBEiJ_G0030389.1 mouse_genomes_project 6 123360557 123400819 + MGP_WSBEiJ_P0078608 A2m protein_coding protein_coding MGP_WSBEiJ_T0078609.1 MGP_WSBEiJ_G0030389.1 mouse_genomes_project 6 123379636 123382214 + A2m protein_coding retained_intron MGP_WSBEiJ_T0002031.1 MGP_WSBEiJ_G0001951.1 mouse_genomes_project 6 89542132 89545900 + TEC TEC MGP_WSBEiJ_T0075924.1 MGP_WSBEiJ_G0029807.1 mouse_genomes_project 6 39515621 39533411 - MGP_WSBEiJ_P0075924 Trpv6 protein_coding protein_coding MGP_WSBEiJ_T0075925.1 MGP_WSBEiJ_G0029807.1 mouse_genomes_project 6 39515624 39533411 - MGP_WSBEiJ_P0075925 Trpv6 protein_coding protein_coding MGP_WSBEiJ_T0075926.1 MGP_WSBEiJ_G0029807.1 mouse_genomes_project 6 39518492 39533386 - Trpv6 protein_coding retained_intron MGP_WSBEiJ_T0078648.1 MGP_WSBEiJ_G0030397.1 mouse_genomes_project 6 124432277 124443024 + MGP_WSBEiJ_P0078648 Aicda protein_coding protein_coding MGP_WSBEiJ_T0078649.1 MGP_WSBEiJ_G0030397.1 mouse_genomes_project 6 124439336 124441921 + MGP_WSBEiJ_P0078649 Aicda protein_coding protein_coding MGP_WSBEiJ_T0015183.1 MGP_WSBEiJ_G0013313.1 mouse_genomes_project 6 144784998 144785528 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076215.1 MGP_WSBEiJ_G0029893.1 mouse_genomes_project 6 47260251 47265113 + MGP_WSBEiJ_P0076215 Svs1 protein_coding protein_coding MGP_WSBEiJ_T0076873.1 MGP_WSBEiJ_G0030055.1 mouse_genomes_project 6 72859054 72922046 - MGP_WSBEiJ_P0076873 Kcmf1 protein_coding protein_coding MGP_WSBEiJ_T0076874.1 MGP_WSBEiJ_G0030055.1 mouse_genomes_project 6 72859170 72922120 - MGP_WSBEiJ_P0076874 Kcmf1 protein_coding protein_coding MGP_WSBEiJ_T0076875.1 MGP_WSBEiJ_G0030055.1 mouse_genomes_project 6 72862578 72865622 - Kcmf1 protein_coding retained_intron MGP_WSBEiJ_T0076876.1 MGP_WSBEiJ_G0030055.1 mouse_genomes_project 6 72864444 72875044 - Kcmf1 protein_coding processed_transcript MGP_WSBEiJ_T0014859.1 MGP_WSBEiJ_G0012989.1 mouse_genomes_project 6 41242672 41243094 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015158.1 MGP_WSBEiJ_G0013288.1 mouse_genomes_project 6 135609606 135610039 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076447.1 MGP_WSBEiJ_G0029945.1 mouse_genomes_project 6 53833888 53955923 + MGP_WSBEiJ_P0076447 Fam188b protein_coding protein_coding MGP_WSBEiJ_T0076448.1 MGP_WSBEiJ_G0029945.1 mouse_genomes_project 6 53833888 53912412 + MGP_WSBEiJ_P0076448 Fam188b protein_coding protein_coding MGP_WSBEiJ_T0076449.1 MGP_WSBEiJ_G0029945.1 mouse_genomes_project 6 53911941 53954016 + Fam188b protein_coding processed_transcript MGP_WSBEiJ_T0008582.1 MGP_WSBEiJ_G0006943.1 mouse_genomes_project 6 122227233 122235257 + 1700072O05Rik lincRNA lincRNA MGP_WSBEiJ_T0079095.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130780286 130798941 - MGP_WSBEiJ_P0079095 Itfg2 protein_coding protein_coding MGP_WSBEiJ_T0079096.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130780340 130781214 - MGP_WSBEiJ_P0079096 Itfg2 protein_coding protein_coding MGP_WSBEiJ_T0079097.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130780375 130798928 - MGP_WSBEiJ_P0079097 Itfg2 protein_coding protein_coding MGP_WSBEiJ_T0079098.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130781045 130798879 - MGP_WSBEiJ_P0079098 Itfg2 protein_coding protein_coding MGP_WSBEiJ_T0079099.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130781091 130781519 - Itfg2 protein_coding retained_intron MGP_WSBEiJ_T0079100.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130782421 130785160 - Itfg2 protein_coding retained_intron MGP_WSBEiJ_T0079101.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130783842 130798922 - MGP_WSBEiJ_P0079101 Itfg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079102.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130784475 130798923 - MGP_WSBEiJ_P0079102 Itfg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079103.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130786414 130798940 - Itfg2 protein_coding retained_intron MGP_WSBEiJ_T0079104.1 MGP_WSBEiJ_G0030494.1 mouse_genomes_project 6 130795692 130798928 - Itfg2 protein_coding retained_intron MGP_WSBEiJ_T0015089.1 MGP_WSBEiJ_G0013219.1 mouse_genomes_project 6 118722413 118722790 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074919.1 MGP_WSBEiJ_G0029598.1 mouse_genomes_project 6 703898 707542 + MGP_WSBEiJ_P0074919 Gngt1 protein_coding protein_coding MGP_WSBEiJ_T0074920.1 MGP_WSBEiJ_G0029598.1 mouse_genomes_project 6 703903 707007 + Gngt1 protein_coding retained_intron MGP_WSBEiJ_T0014915.1 MGP_WSBEiJ_G0013045.1 mouse_genomes_project 6 60085490 60086015 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002100.1 MGP_WSBEiJ_G0002019.1 mouse_genomes_project 6 129754510 129757348 + TEC TEC MGP_WSBEiJ_T0099696.1 MGP_WSBEiJ_G0038359.1 mouse_genomes_project 6 148546541 148546674 - Gm22792 snoRNA snoRNA MGP_WSBEiJ_T0001998.1 MGP_WSBEiJ_G0001918.1 mouse_genomes_project 6 83363553 83365021 + TEC TEC MGP_WSBEiJ_T0099647.1 MGP_WSBEiJ_G0038310.1 mouse_genomes_project 6 48886227 48886358 - Gm26289 snoRNA snoRNA MGP_WSBEiJ_T0002615.1 MGP_WSBEiJ_G0002506.1 mouse_genomes_project 6 38977025 38977528 + MGP_WSBEiJ_P0002615 Trbv12-1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0014995.1 MGP_WSBEiJ_G0013125.1 mouse_genomes_project 6 83321066 83321424 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015068.1 MGP_WSBEiJ_G0013198.1 mouse_genomes_project 6 111838559 111839134 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076669.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66590118 66626387 + Serbp1 protein_coding processed_transcript MGP_WSBEiJ_T0076670.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66621748 66655151 + MGP_WSBEiJ_P0076670 Serbp1 protein_coding protein_coding MGP_WSBEiJ_T0076671.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622107 66641712 + MGP_WSBEiJ_P0076671 Serbp1 protein_coding protein_coding MGP_WSBEiJ_T0076672.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622112 66624475 + Serbp1 protein_coding retained_intron MGP_WSBEiJ_T0076673.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622129 66641472 + MGP_WSBEiJ_P0076673 Serbp1 protein_coding protein_coding MGP_WSBEiJ_T0076674.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622134 66640347 + MGP_WSBEiJ_P0076674 Serbp1 protein_coding protein_coding MGP_WSBEiJ_T0076675.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622135 66629127 + Serbp1 protein_coding retained_intron MGP_WSBEiJ_T0076676.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622135 66640347 + MGP_WSBEiJ_P0076676 Serbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076677.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622135 66641717 + MGP_WSBEiJ_P0076677 Serbp1 protein_coding protein_coding MGP_WSBEiJ_T0076678.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622140 66629722 + Serbp1 protein_coding retained_intron MGP_WSBEiJ_T0076679.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622162 66632898 + MGP_WSBEiJ_P0076679 Serbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076680.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622195 66640314 + MGP_WSBEiJ_P0076680 Serbp1 protein_coding protein_coding MGP_WSBEiJ_T0076681.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622203 66627355 + Serbp1 protein_coding retained_intron MGP_WSBEiJ_T0076682.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622381 66627973 + MGP_WSBEiJ_P0076682 Serbp1 protein_coding protein_coding MGP_WSBEiJ_T0076683.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66622454 66636944 + MGP_WSBEiJ_P0076683 Serbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076684.1 MGP_WSBEiJ_G0030015.1 mouse_genomes_project 6 66626993 66636961 + Serbp1 protein_coding retained_intron MGP_WSBEiJ_T0097441.1 MGP_WSBEiJ_G0036111.1 mouse_genomes_project 6 46264715 46265123 - sense_intronic sense_intronic MGP_WSBEiJ_T0008614.1 MGP_WSBEiJ_G0006966.1 mouse_genomes_project 6 138977857 139000118 + 4930425L21Rik lincRNA lincRNA MGP_WSBEiJ_T0008615.1 MGP_WSBEiJ_G0006966.1 mouse_genomes_project 6 138996184 139001250 + 4930425L21Rik lincRNA lincRNA MGP_WSBEiJ_T0098413.1 MGP_WSBEiJ_G0037076.1 mouse_genomes_project 6 39497201 39497263 - Gm27549 snRNA snRNA MGP_WSBEiJ_T0014846.1 MGP_WSBEiJ_G0012976.1 mouse_genomes_project 6 36094518 36094941 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076042.1 MGP_WSBEiJ_G0029853.1 mouse_genomes_project 6 41316778 41322677 - MGP_WSBEiJ_P0076042 Nobox protein_coding protein_coding MGP_WSBEiJ_T0076043.1 MGP_WSBEiJ_G0029853.1 mouse_genomes_project 6 41316804 41318240 - Nobox protein_coding processed_transcript MGP_WSBEiJ_T0076044.1 MGP_WSBEiJ_G0029853.1 mouse_genomes_project 6 41317002 41320341 - MGP_WSBEiJ_P0076044 Nobox protein_coding protein_coding MGP_WSBEiJ_T0078615.1 MGP_WSBEiJ_G0030393.1 mouse_genomes_project 6 124168913 124176602 + MGP_WSBEiJ_P0078615 M6pr protein_coding unknown_likely_coding MGP_WSBEiJ_T0078616.1 MGP_WSBEiJ_G0030393.1 mouse_genomes_project 6 124169134 124176563 + M6pr protein_coding retained_intron MGP_WSBEiJ_T0074897.1 MGP_WSBEiJ_G0029594.1 mouse_genomes_project 6 166776 204360 - MGP_WSBEiJ_P0074897 Hepacam2 protein_coding protein_coding MGP_WSBEiJ_T0074898.1 MGP_WSBEiJ_G0029594.1 mouse_genomes_project 6 167075 197116 - Hepacam2 protein_coding retained_intron MGP_WSBEiJ_T0074899.1 MGP_WSBEiJ_G0029594.1 mouse_genomes_project 6 185793 197130 - MGP_WSBEiJ_P0074899 Hepacam2 protein_coding protein_coding MGP_WSBEiJ_T0074900.1 MGP_WSBEiJ_G0029594.1 mouse_genomes_project 6 193011 208046 - MGP_WSBEiJ_P0074900 Hepacam2 protein_coding protein_coding MGP_WSBEiJ_T0074901.1 MGP_WSBEiJ_G0029594.1 mouse_genomes_project 6 193301 197097 - Hepacam2 protein_coding retained_intron MGP_WSBEiJ_T0008419.1 MGP_WSBEiJ_G0006818.1 mouse_genomes_project 6 29252896 29383477 + Gm13849 lincRNA lincRNA MGP_WSBEiJ_T0078112.1 MGP_WSBEiJ_G0030304.1 mouse_genomes_project 6 115094842 115102513 + MGP_WSBEiJ_P0078112 Vhl protein_coding protein_coding MGP_WSBEiJ_T0078113.1 MGP_WSBEiJ_G0030304.1 mouse_genomes_project 6 115095604 115100641 + Vhl protein_coding processed_transcript MGP_WSBEiJ_T0078114.1 MGP_WSBEiJ_G0030304.1 mouse_genomes_project 6 115095812 115100437 + Vhl protein_coding processed_transcript MGP_WSBEiJ_T0078115.1 MGP_WSBEiJ_G0030304.1 mouse_genomes_project 6 115100386 115102507 + MGP_WSBEiJ_P0078115 Vhl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0015039.1 MGP_WSBEiJ_G0013169.1 mouse_genomes_project 6 101027966 101028578 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075360.1 MGP_WSBEiJ_G0029689.1 mouse_genomes_project 6 26491654 26502632 - MGP_WSBEiJ_P0075360 Prrt4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0014947.1 MGP_WSBEiJ_G0013077.1 mouse_genomes_project 6 66336748 66337135 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004939.1 MGP_WSBEiJ_G0004221.1 mouse_genomes_project 6 88359125 88365651 + Gm44097 antisense antisense MGP_WSBEiJ_T0002036.1 MGP_WSBEiJ_G0001956.1 mouse_genomes_project 6 91324710 91325223 + TEC TEC MGP_WSBEiJ_T0015074.1 MGP_WSBEiJ_G0013204.1 mouse_genomes_project 6 114810357 114813283 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078708.1 MGP_WSBEiJ_G0030416.1 mouse_genomes_project 6 126213867 126253455 - MGP_WSBEiJ_P0078708 protein_coding protein_coding MGP_WSBEiJ_T0075955.1 MGP_WSBEiJ_G0029820.1 mouse_genomes_project 6 40219338 40221924 + MGP_WSBEiJ_P0075955 Tmem139 protein_coding protein_coding MGP_WSBEiJ_T0076746.1 MGP_WSBEiJ_G0030033.1 mouse_genomes_project 6 71617557 71729236 + MGP_WSBEiJ_P0076746 Reep1 protein_coding protein_coding MGP_WSBEiJ_T0015151.1 MGP_WSBEiJ_G0013281.1 mouse_genomes_project 6 135041634 135042085 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078819.1 MGP_WSBEiJ_G0030438.1 mouse_genomes_project 6 126932881 126937432 + MGP_WSBEiJ_P0078819 Cdca3 protein_coding protein_coding MGP_WSBEiJ_T0078820.1 MGP_WSBEiJ_G0030438.1 mouse_genomes_project 6 126933022 126938469 + MGP_WSBEiJ_P0078820 Cdca3 protein_coding protein_coding MGP_WSBEiJ_T0078821.1 MGP_WSBEiJ_G0030438.1 mouse_genomes_project 6 126933551 126937353 + MGP_WSBEiJ_P0078821 Cdca3 protein_coding protein_coding MGP_WSBEiJ_T0078822.1 MGP_WSBEiJ_G0030438.1 mouse_genomes_project 6 126933569 126938300 + Cdca3 protein_coding retained_intron MGP_WSBEiJ_T0078823.1 MGP_WSBEiJ_G0030438.1 mouse_genomes_project 6 126933697 126936800 + Cdca3 protein_coding retained_intron MGP_WSBEiJ_T0078824.1 MGP_WSBEiJ_G0030438.1 mouse_genomes_project 6 126933709 126937207 + MGP_WSBEiJ_P0078824 Cdca3 protein_coding protein_coding MGP_WSBEiJ_T0001906.1 MGP_WSBEiJ_G0001826.1 mouse_genomes_project 6 30526236 30529216 - TEC TEC MGP_WSBEiJ_T0075827.1 MGP_WSBEiJ_G0029771.1 mouse_genomes_project 6 37172684 37201855 - MGP_WSBEiJ_P0075827 Mkrn1 protein_coding protein_coding MGP_WSBEiJ_T0075828.1 MGP_WSBEiJ_G0029771.1 mouse_genomes_project 6 37174022 37179588 - MGP_WSBEiJ_P0075828 Mkrn1 protein_coding protein_coding MGP_WSBEiJ_T0075829.1 MGP_WSBEiJ_G0029771.1 mouse_genomes_project 6 37175633 37201639 - MGP_WSBEiJ_P0075829 Mkrn1 protein_coding protein_coding MGP_WSBEiJ_T0075830.1 MGP_WSBEiJ_G0029771.1 mouse_genomes_project 6 37175639 37201930 - MGP_WSBEiJ_P0075830 Mkrn1 protein_coding protein_coding MGP_WSBEiJ_T0075831.1 MGP_WSBEiJ_G0029771.1 mouse_genomes_project 6 37176154 37179939 - Mkrn1 protein_coding retained_intron MGP_WSBEiJ_T0075832.1 MGP_WSBEiJ_G0029771.1 mouse_genomes_project 6 37179668 37201329 - MGP_WSBEiJ_P0075832 Mkrn1 protein_coding protein_coding MGP_WSBEiJ_T0075833.1 MGP_WSBEiJ_G0029771.1 mouse_genomes_project 6 37180396 37201870 - MGP_WSBEiJ_P0075833 Mkrn1 protein_coding protein_coding MGP_WSBEiJ_T0014828.1 MGP_WSBEiJ_G0012958.1 mouse_genomes_project 6 22269075 22269871 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079398.1 MGP_WSBEiJ_G0030596.1 mouse_genomes_project 6 140322253 140337862 - MGP_WSBEiJ_P0079398 Erp27 protein_coding protein_coding MGP_WSBEiJ_T0079399.1 MGP_WSBEiJ_G0030596.1 mouse_genomes_project 6 140324709 140337862 - Erp27 protein_coding retained_intron MGP_WSBEiJ_T0079400.1 MGP_WSBEiJ_G0030596.1 mouse_genomes_project 6 140335348 140337822 - Erp27 protein_coding retained_intron MGP_WSBEiJ_T0005544.1 MGP_WSBEiJ_G0004667.1 mouse_genomes_project 6 60384790 60387018 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0005545.1 MGP_WSBEiJ_G0004667.1 mouse_genomes_project 6 60386475 60392795 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0005546.1 MGP_WSBEiJ_G0004667.1 mouse_genomes_project 6 60388545 60393335 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0000180.1 MGP_WSBEiJ_G0000136.1 mouse_genomes_project 6 69031836 69032112 - MGP_WSBEiJ_P0000180 IG_V_gene IG_V_gene MGP_WSBEiJ_T0004898.1 MGP_WSBEiJ_G0004200.1 mouse_genomes_project 6 72627439 72635418 + Gm15401 antisense antisense MGP_WSBEiJ_T0004899.1 MGP_WSBEiJ_G0004200.1 mouse_genomes_project 6 72627988 72636301 + Gm15401 antisense antisense MGP_WSBEiJ_T0004900.1 MGP_WSBEiJ_G0004200.1 mouse_genomes_project 6 72635186 72636652 + Gm15401 antisense antisense MGP_WSBEiJ_T0004833.1 MGP_WSBEiJ_G0004148.1 mouse_genomes_project 6 15420696 15423888 + Gm15594 antisense antisense MGP_WSBEiJ_T0078101.1 MGP_WSBEiJ_G0030301.1 mouse_genomes_project 6 114994389 115066265 + MGP_WSBEiJ_P0078101 Fancd2 protein_coding protein_coding MGP_WSBEiJ_T0078102.1 MGP_WSBEiJ_G0030301.1 mouse_genomes_project 6 114994411 115000577 + Fancd2 protein_coding retained_intron MGP_WSBEiJ_T0078103.1 MGP_WSBEiJ_G0030301.1 mouse_genomes_project 6 114994411 115001460 + Fancd2 protein_coding retained_intron MGP_WSBEiJ_T0078104.1 MGP_WSBEiJ_G0030301.1 mouse_genomes_project 6 114994411 115065521 + MGP_WSBEiJ_P0078104 Fancd2 protein_coding protein_coding MGP_WSBEiJ_T0078105.1 MGP_WSBEiJ_G0030301.1 mouse_genomes_project 6 115015091 115017258 + Fancd2 protein_coding retained_intron MGP_WSBEiJ_T0078106.1 MGP_WSBEiJ_G0030301.1 mouse_genomes_project 6 115015095 115026740 + MGP_WSBEiJ_P0078106 Fancd2 protein_coding protein_coding MGP_WSBEiJ_T0078107.1 MGP_WSBEiJ_G0030301.1 mouse_genomes_project 6 115032951 115038831 + MGP_WSBEiJ_P0078107 Fancd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078108.1 MGP_WSBEiJ_G0030301.1 mouse_genomes_project 6 115051753 115054340 + Fancd2 protein_coding retained_intron MGP_WSBEiJ_T0010642.1 MGP_WSBEiJ_G0008799.1 mouse_genomes_project 6 136364222 136364332 + Gm25019 miRNA miRNA MGP_WSBEiJ_T0076762.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71801683 71832956 - MGP_WSBEiJ_P0076762 Ptcd3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0076763.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71804280 71832966 - MGP_WSBEiJ_P0076763 Ptcd3 protein_coding protein_coding MGP_WSBEiJ_T0076764.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71804281 71832966 - MGP_WSBEiJ_P0076764 Ptcd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076765.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71804283 71813927 - Ptcd3 protein_coding retained_intron MGP_WSBEiJ_T0076766.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71809363 71813852 - Ptcd3 protein_coding retained_intron MGP_WSBEiJ_T0076767.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71811508 71832960 - Ptcd3 protein_coding retained_intron MGP_WSBEiJ_T0076768.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71812862 71821368 - MGP_WSBEiJ_P0076768 Ptcd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076769.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71817193 71819350 - Ptcd3 protein_coding retained_intron MGP_WSBEiJ_T0076770.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71819508 71822652 - Ptcd3 protein_coding retained_intron MGP_WSBEiJ_T0076771.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71822608 71832934 - MGP_WSBEiJ_P0076771 Ptcd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076772.1 MGP_WSBEiJ_G0030036.1 mouse_genomes_project 6 71826902 71827687 - Ptcd3 protein_coding retained_intron MGP_WSBEiJ_T0015034.1 MGP_WSBEiJ_G0013164.1 mouse_genomes_project 6 98508667 98510317 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002517.1 MGP_WSBEiJ_G0002426.1 mouse_genomes_project 6 39422949 39422999 + MGP_WSBEiJ_P0002517 Trbj1-5 TR_J_gene TR_J_gene MGP_WSBEiJ_T0008496.1 MGP_WSBEiJ_G0006875.1 mouse_genomes_project 6 72108464 72113330 + Gm45050 lincRNA lincRNA MGP_WSBEiJ_T0010598.1 MGP_WSBEiJ_G0008755.1 mouse_genomes_project 6 50717171 50717256 - Mir196b miRNA miRNA MGP_WSBEiJ_T0010602.1 MGP_WSBEiJ_G0008759.1 mouse_genomes_project 6 74545898 74546008 - Gm22254 miRNA miRNA MGP_WSBEiJ_T0002139.1 MGP_WSBEiJ_G0002058.1 mouse_genomes_project 6 150632524 150633451 - TEC TEC MGP_WSBEiJ_T0014832.1 MGP_WSBEiJ_G0012962.1 mouse_genomes_project 6 27122142 27122507 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015083.1 MGP_WSBEiJ_G0013213.1 mouse_genomes_project 6 116547841 116548676 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078683.1 MGP_WSBEiJ_G0030407.1 mouse_genomes_project 6 124884140 124912442 + MGP_WSBEiJ_P0078683 Clec4a4 protein_coding protein_coding MGP_WSBEiJ_T0075495.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27781807 27808564 - MGP_WSBEiJ_P0075495 Zc3hc1 protein_coding protein_coding MGP_WSBEiJ_T0075496.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27781811 27808543 - MGP_WSBEiJ_P0075496 Zc3hc1 protein_coding protein_coding MGP_WSBEiJ_T0075497.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27781815 27782646 - Zc3hc1 protein_coding retained_intron MGP_WSBEiJ_T0075498.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27781815 27808569 - MGP_WSBEiJ_P0075498 Zc3hc1 protein_coding protein_coding MGP_WSBEiJ_T0075499.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27781901 27808551 - MGP_WSBEiJ_P0075499 Zc3hc1 protein_coding protein_coding MGP_WSBEiJ_T0075500.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27785709 27788416 - Zc3hc1 protein_coding retained_intron MGP_WSBEiJ_T0075501.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27788363 27808547 - MGP_WSBEiJ_P0075501 Zc3hc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075502.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27790234 27798932 - Zc3hc1 protein_coding processed_transcript MGP_WSBEiJ_T0075503.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27791414 27808530 - MGP_WSBEiJ_P0075503 Zc3hc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075504.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27801081 27808551 - Zc3hc1 protein_coding retained_intron MGP_WSBEiJ_T0075505.1 MGP_WSBEiJ_G0029709.1 mouse_genomes_project 6 27803643 27808555 - Zc3hc1 protein_coding retained_intron MGP_WSBEiJ_T0002116.1 MGP_WSBEiJ_G0002035.1 mouse_genomes_project 6 138609474 138609730 - TEC TEC MGP_WSBEiJ_T0075644.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32146521 32337320 + MGP_WSBEiJ_P0075644 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075645.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32146533 32313913 + MGP_WSBEiJ_P0075645 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075646.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32146565 32243893 + Cald1 protein_coding retained_intron MGP_WSBEiJ_T0075647.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32146565 32302617 + Cald1 protein_coding retained_intron MGP_WSBEiJ_T0075648.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32146585 32337332 + MGP_WSBEiJ_P0075648 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075649.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32146586 32337332 + MGP_WSBEiJ_P0075649 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075650.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32146641 32218136 + Cald1 protein_coding retained_intron MGP_WSBEiJ_T0075651.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32269270 32337339 + MGP_WSBEiJ_P0075651 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075652.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32269318 32270582 + Cald1 protein_coding retained_intron MGP_WSBEiJ_T0075653.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32269318 32337334 + MGP_WSBEiJ_P0075653 Cald1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075654.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32269462 32335540 + MGP_WSBEiJ_P0075654 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075655.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32306299 32316217 + MGP_WSBEiJ_P0075655 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075656.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32306328 32316127 + MGP_WSBEiJ_P0075656 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075657.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32306354 32316127 + MGP_WSBEiJ_P0075657 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075658.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32306733 32323952 + MGP_WSBEiJ_P0075658 Cald1 protein_coding protein_coding MGP_WSBEiJ_T0075659.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32308118 32313832 + Cald1 protein_coding retained_intron MGP_WSBEiJ_T0075660.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32324685 32328667 + Cald1 protein_coding retained_intron MGP_WSBEiJ_T0075661.1 MGP_WSBEiJ_G0029735.1 mouse_genomes_project 6 32326790 32328474 + Cald1 protein_coding retained_intron MGP_WSBEiJ_T0000049.1 MGP_WSBEiJ_G0000040.1 mouse_genomes_project 6 70561861 70561899 + MGP_WSBEiJ_P0000049 Igkj5 IG_J_gene IG_J_gene MGP_WSBEiJ_T0000050.1 MGP_WSBEiJ_G0000040.1 mouse_genomes_project 6 70561861 70561903 + Igkj5 IG_J_gene processed_transcript MGP_WSBEiJ_T0100953.1 MGP_WSBEiJ_G0039410.1 mouse_genomes_project 6 136607658 136609294 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008532.1 MGP_WSBEiJ_G0006902.1 mouse_genomes_project 6 90023182 90039975 - Gm44205 lincRNA lincRNA MGP_WSBEiJ_T0008533.1 MGP_WSBEiJ_G0006902.1 mouse_genomes_project 6 90023188 90026875 - Gm44205 lincRNA lincRNA MGP_WSBEiJ_T0008534.1 MGP_WSBEiJ_G0006902.1 mouse_genomes_project 6 90038900 90039944 - Gm44205 lincRNA lincRNA MGP_WSBEiJ_T0076395.1 MGP_WSBEiJ_G0029933.1 mouse_genomes_project 6 52897315 52899382 + Prr15 protein_coding retained_intron MGP_WSBEiJ_T0076396.1 MGP_WSBEiJ_G0029933.1 mouse_genomes_project 6 52898357 52901657 + MGP_WSBEiJ_P0076396 Prr15 protein_coding protein_coding MGP_WSBEiJ_T0076451.1 MGP_WSBEiJ_G0029947.1 mouse_genomes_project 6 54012792 54019359 + Ghrhr protein_coding retained_intron MGP_WSBEiJ_T0076452.1 MGP_WSBEiJ_G0029947.1 mouse_genomes_project 6 54012840 54024940 + MGP_WSBEiJ_P0076452 Ghrhr protein_coding protein_coding MGP_WSBEiJ_T0076453.1 MGP_WSBEiJ_G0029947.1 mouse_genomes_project 6 54012862 54024729 + MGP_WSBEiJ_P0076453 Ghrhr protein_coding protein_coding MGP_WSBEiJ_T0000182.1 MGP_WSBEiJ_G0000138.1 mouse_genomes_project 6 69642991 69643545 - MGP_WSBEiJ_P0000182 Igkv5-39 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000183.1 MGP_WSBEiJ_G0000138.1 mouse_genomes_project 6 69642991 69643278 - MGP_WSBEiJ_P0000183 Igkv5-39 IG_V_gene IG_V_gene MGP_WSBEiJ_T0004938.1 MGP_WSBEiJ_G0004220.1 mouse_genomes_project 6 87965142 87967149 + Gm44418 antisense antisense MGP_WSBEiJ_T0076486.1 MGP_WSBEiJ_G0029955.1 mouse_genomes_project 6 55464628 55485076 - MGP_WSBEiJ_P0076486 Kbtbd2 protein_coding protein_coding MGP_WSBEiJ_T0076487.1 MGP_WSBEiJ_G0029955.1 mouse_genomes_project 6 55464629 55485153 - MGP_WSBEiJ_P0076487 Kbtbd2 protein_coding protein_coding MGP_WSBEiJ_T0076488.1 MGP_WSBEiJ_G0029955.1 mouse_genomes_project 6 55476457 55484619 - MGP_WSBEiJ_P0076488 Kbtbd2 protein_coding protein_coding MGP_WSBEiJ_T0076489.1 MGP_WSBEiJ_G0029955.1 mouse_genomes_project 6 55476602 55483814 - Kbtbd2 protein_coding processed_transcript MGP_WSBEiJ_T0015090.1 MGP_WSBEiJ_G0013220.1 mouse_genomes_project 6 118986385 118986809 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008402.1 MGP_WSBEiJ_G0006808.1 mouse_genomes_project 6 28517595 28646652 - Lncpint lincRNA lincRNA MGP_WSBEiJ_T0008404.1 MGP_WSBEiJ_G0006808.1 mouse_genomes_project 6 28591289 28646611 - Lncpint lincRNA lincRNA MGP_WSBEiJ_T0008405.1 MGP_WSBEiJ_G0006808.1 mouse_genomes_project 6 28592242 28646598 - Lncpint lincRNA lincRNA MGP_WSBEiJ_T0008406.1 MGP_WSBEiJ_G0006808.1 mouse_genomes_project 6 28592290 28646524 - Lncpint lincRNA lincRNA MGP_WSBEiJ_T0014794.1 MGP_WSBEiJ_G0012924.1 mouse_genomes_project 6 7017421 7018484 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015042.1 MGP_WSBEiJ_G0013172.1 mouse_genomes_project 6 101028137 101028578 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002145.1 MGP_WSBEiJ_G0002064.1 mouse_genomes_project 6 152772024 152773486 - TEC TEC MGP_WSBEiJ_T0008544.1 MGP_WSBEiJ_G0006912.1 mouse_genomes_project 6 99669237 99686114 - Gm44197 lincRNA lincRNA MGP_WSBEiJ_T0014826.1 MGP_WSBEiJ_G0012956.1 mouse_genomes_project 6 21810806 21811513 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076116.1 MGP_WSBEiJ_G0029868.1 mouse_genomes_project 6 46669441 46685847 - MGP_WSBEiJ_P0076116 Zfp467 protein_coding protein_coding MGP_WSBEiJ_T0076117.1 MGP_WSBEiJ_G0029868.1 mouse_genomes_project 6 46669441 46688484 - MGP_WSBEiJ_P0076117 Zfp467 protein_coding protein_coding MGP_WSBEiJ_T0076118.1 MGP_WSBEiJ_G0029868.1 mouse_genomes_project 6 46669441 46688588 - MGP_WSBEiJ_P0076118 Zfp467 protein_coding protein_coding MGP_WSBEiJ_T0076119.1 MGP_WSBEiJ_G0029868.1 mouse_genomes_project 6 46675906 46688393 - MGP_WSBEiJ_P0076119 Zfp467 protein_coding protein_coding MGP_WSBEiJ_T0076120.1 MGP_WSBEiJ_G0029868.1 mouse_genomes_project 6 46678418 46688868 - MGP_WSBEiJ_P0076120 Zfp467 protein_coding protein_coding MGP_WSBEiJ_T0076121.1 MGP_WSBEiJ_G0029868.1 mouse_genomes_project 6 46681194 46688378 - MGP_WSBEiJ_P0076121 Zfp467 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076122.1 MGP_WSBEiJ_G0029868.1 mouse_genomes_project 6 46684576 46688515 - Zfp467 protein_coding retained_intron MGP_WSBEiJ_T0011460.1 MGP_WSBEiJ_G0009617.1 mouse_genomes_project 6 89135096 89135419 + Gm25178 misc_RNA misc_RNA MGP_WSBEiJ_T0014803.1 MGP_WSBEiJ_G0012933.1 mouse_genomes_project 6 10769975 10770269 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004998.1 MGP_WSBEiJ_G0004263.1 mouse_genomes_project 6 126531836 126533998 - Gm44096 antisense antisense MGP_WSBEiJ_T0011439.1 MGP_WSBEiJ_G0009596.1 mouse_genomes_project 6 45984979 45985081 + Rny3 misc_RNA misc_RNA MGP_WSBEiJ_T0076490.1 MGP_WSBEiJ_G0029956.1 mouse_genomes_project 6 55521970 55570729 + MGP_WSBEiJ_P0076490 Fkbp9 protein_coding protein_coding MGP_WSBEiJ_T0076491.1 MGP_WSBEiJ_G0029956.1 mouse_genomes_project 6 55540708 55542042 + Fkbp9 protein_coding retained_intron MGP_WSBEiJ_T0075330.1 MGP_WSBEiJ_G0029683.1 mouse_genomes_project 6 25724608 25735750 + MGP_WSBEiJ_P0075330 Fscn3 protein_coding protein_coding MGP_WSBEiJ_T0075331.1 MGP_WSBEiJ_G0029683.1 mouse_genomes_project 6 25731432 25733030 + Fscn3 protein_coding processed_transcript MGP_WSBEiJ_T0100136.1 MGP_WSBEiJ_G0038725.1 mouse_genomes_project 6 124809441 124812538 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100137.1 MGP_WSBEiJ_G0038725.1 mouse_genomes_project 6 124809856 124810126 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0076087.1 MGP_WSBEiJ_G0029861.1 mouse_genomes_project 6 46089905 46120269 + MGP_WSBEiJ_P0076087 Zfp282 protein_coding protein_coding MGP_WSBEiJ_T0076088.1 MGP_WSBEiJ_G0029861.1 mouse_genomes_project 6 46090357 46105536 + Zfp282 protein_coding retained_intron MGP_WSBEiJ_T0002513.1 MGP_WSBEiJ_G0002423.1 mouse_genomes_project 6 39421864 39421912 + MGP_WSBEiJ_P0002513 Trbj1-2 TR_J_gene TR_J_gene MGP_WSBEiJ_T0008359.1 MGP_WSBEiJ_G0006781.1 mouse_genomes_project 6 3050587 3082352 + Gm20619 lincRNA lincRNA MGP_WSBEiJ_T0008360.1 MGP_WSBEiJ_G0006781.1 mouse_genomes_project 6 3050615 3170483 + Gm20619 lincRNA lincRNA MGP_WSBEiJ_T0008361.1 MGP_WSBEiJ_G0006781.1 mouse_genomes_project 6 3050618 3187213 + Gm20619 lincRNA lincRNA MGP_WSBEiJ_T0008362.1 MGP_WSBEiJ_G0006781.1 mouse_genomes_project 6 3050646 3082348 + Gm20619 lincRNA lincRNA MGP_WSBEiJ_T0008363.1 MGP_WSBEiJ_G0006781.1 mouse_genomes_project 6 3097863 3170278 + Gm20619 lincRNA lincRNA MGP_WSBEiJ_T0076463.1 MGP_WSBEiJ_G0029950.1 mouse_genomes_project 6 54496443 54642491 + MGP_WSBEiJ_P0076463 Ccdc129 protein_coding protein_coding MGP_WSBEiJ_T0076464.1 MGP_WSBEiJ_G0029950.1 mouse_genomes_project 6 54549523 54642604 + Ccdc129 protein_coding processed_transcript MGP_WSBEiJ_T0001879.1 MGP_WSBEiJ_G0001799.1 mouse_genomes_project 6 4642080 4643950 + TEC TEC MGP_WSBEiJ_T0002064.1 MGP_WSBEiJ_G0001984.1 mouse_genomes_project 6 102627766 102628719 - TEC TEC MGP_WSBEiJ_T0015045.1 MGP_WSBEiJ_G0013175.1 mouse_genomes_project 6 101983180 101983763 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079658.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148939363 148971977 - Casc1 protein_coding retained_intron MGP_WSBEiJ_T0079659.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148939363 148977692 - MGP_WSBEiJ_P0079659 Casc1 protein_coding protein_coding MGP_WSBEiJ_T0079660.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148939363 148977513 - MGP_WSBEiJ_P0079660 Casc1 protein_coding protein_coding MGP_WSBEiJ_T0079661.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148939471 148977596 - MGP_WSBEiJ_P0079661 Casc1 protein_coding protein_coding MGP_WSBEiJ_T0079662.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148956229 148977621 - Casc1 protein_coding retained_intron MGP_WSBEiJ_T0079663.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148958880 148977591 - Casc1 protein_coding processed_transcript MGP_WSBEiJ_T0079664.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148969515 148977601 - Casc1 protein_coding retained_intron MGP_WSBEiJ_T0079665.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148970897 148977631 - Casc1 protein_coding retained_intron MGP_WSBEiJ_T0079666.1 MGP_WSBEiJ_G0030642.1 mouse_genomes_project 6 148974715 148977727 - Casc1 protein_coding retained_intron MGP_WSBEiJ_T0079113.1 MGP_WSBEiJ_G0030497.1 mouse_genomes_project 6 130922662 130927639 - BC048546 protein_coding retained_intron MGP_WSBEiJ_T0079114.1 MGP_WSBEiJ_G0030497.1 mouse_genomes_project 6 130922668 130968934 - MGP_WSBEiJ_P0079114 BC048546 protein_coding protein_coding MGP_WSBEiJ_T0079115.1 MGP_WSBEiJ_G0030497.1 mouse_genomes_project 6 130932639 130937451 - BC048546 protein_coding retained_intron MGP_WSBEiJ_T0079116.1 MGP_WSBEiJ_G0030497.1 mouse_genomes_project 6 130942384 130943630 - BC048546 protein_coding retained_intron MGP_WSBEiJ_T0079117.1 MGP_WSBEiJ_G0030497.1 mouse_genomes_project 6 130961481 130964071 - BC048546 protein_coding retained_intron MGP_WSBEiJ_T0075879.1 MGP_WSBEiJ_G0029782.1 mouse_genomes_project 6 38311580 38324848 + MGP_WSBEiJ_P0075879 Ssbp1 protein_coding protein_coding MGP_WSBEiJ_T0075880.1 MGP_WSBEiJ_G0029782.1 mouse_genomes_project 6 38311643 38318790 + MGP_WSBEiJ_P0075880 Ssbp1 protein_coding protein_coding MGP_WSBEiJ_T0075881.1 MGP_WSBEiJ_G0029782.1 mouse_genomes_project 6 38311681 38314513 + Ssbp1 protein_coding retained_intron MGP_WSBEiJ_T0075882.1 MGP_WSBEiJ_G0029782.1 mouse_genomes_project 6 38311696 38321159 + MGP_WSBEiJ_P0075882 Ssbp1 protein_coding protein_coding MGP_WSBEiJ_T0075883.1 MGP_WSBEiJ_G0029782.1 mouse_genomes_project 6 38311703 38321156 + MGP_WSBEiJ_P0075883 Ssbp1 protein_coding protein_coding MGP_WSBEiJ_T0075884.1 MGP_WSBEiJ_G0029782.1 mouse_genomes_project 6 38311754 38316733 + MGP_WSBEiJ_P0075884 Ssbp1 protein_coding protein_coding MGP_WSBEiJ_T0075885.1 MGP_WSBEiJ_G0029782.1 mouse_genomes_project 6 38316700 38317648 + Ssbp1 protein_coding retained_intron MGP_WSBEiJ_T0015131.1 MGP_WSBEiJ_G0013261.1 mouse_genomes_project 6 129670164 129671766 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077195.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85726414 85852146 - MGP_WSBEiJ_P0077195 Sfxn5 protein_coding protein_coding MGP_WSBEiJ_T0077196.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85742654 85779379 - Sfxn5 protein_coding processed_transcript MGP_WSBEiJ_T0077197.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85747726 85852143 - MGP_WSBEiJ_P0077197 Sfxn5 protein_coding protein_coding MGP_WSBEiJ_T0077198.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85783153 85852130 - Sfxn5 protein_coding retained_intron MGP_WSBEiJ_T0077199.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85809480 85852143 - Sfxn5 protein_coding processed_transcript MGP_WSBEiJ_T0077200.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85815134 85852146 - MGP_WSBEiJ_P0077200 Sfxn5 protein_coding protein_coding MGP_WSBEiJ_T0077201.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85815136 85838434 - Sfxn5 protein_coding processed_transcript MGP_WSBEiJ_T0077202.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85836911 85851474 - MGP_WSBEiJ_P0077202 Sfxn5 protein_coding protein_coding MGP_WSBEiJ_T0077203.1 MGP_WSBEiJ_G0030119.1 mouse_genomes_project 6 85847667 85852146 - Sfxn5 protein_coding retained_intron MGP_WSBEiJ_T0015057.1 MGP_WSBEiJ_G0013187.1 mouse_genomes_project 6 108515469 108515924 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074921.1 MGP_WSBEiJ_G0029599.1 mouse_genomes_project 6 714020 718535 + MGP_WSBEiJ_P0074921 Gng11 protein_coding protein_coding MGP_WSBEiJ_T0077224.1 MGP_WSBEiJ_G0030124.1 mouse_genomes_project 6 85983005 86001903 + MGP_WSBEiJ_P0077224 Cct7 protein_coding protein_coding MGP_WSBEiJ_T0077225.1 MGP_WSBEiJ_G0030124.1 mouse_genomes_project 6 85983509 85987392 + Cct7 protein_coding retained_intron MGP_WSBEiJ_T0077226.1 MGP_WSBEiJ_G0030124.1 mouse_genomes_project 6 85983542 86001710 + MGP_WSBEiJ_P0077226 Cct7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077227.1 MGP_WSBEiJ_G0030124.1 mouse_genomes_project 6 85983582 86001710 + MGP_WSBEiJ_P0077227 Cct7 protein_coding protein_coding MGP_WSBEiJ_T0077228.1 MGP_WSBEiJ_G0030124.1 mouse_genomes_project 6 85992224 85998337 + Cct7 protein_coding retained_intron MGP_WSBEiJ_T0077229.1 MGP_WSBEiJ_G0030124.1 mouse_genomes_project 6 85993257 85999364 + Cct7 protein_coding retained_intron MGP_WSBEiJ_T0077230.1 MGP_WSBEiJ_G0030124.1 mouse_genomes_project 6 85993638 85999515 + MGP_WSBEiJ_P0077230 Cct7 protein_coding protein_coding MGP_WSBEiJ_T0005551.1 MGP_WSBEiJ_G0004670.1 mouse_genomes_project 6 116516779 116524288 - Gm17733 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0001938.1 MGP_WSBEiJ_G0001858.1 mouse_genomes_project 6 44585558 44588028 + TEC TEC MGP_WSBEiJ_T0011451.1 MGP_WSBEiJ_G0009608.1 mouse_genomes_project 6 50749529 50749588 + Gm27280 misc_RNA misc_RNA MGP_WSBEiJ_T0000144.1 MGP_WSBEiJ_G0000109.1 mouse_genomes_project 6 67080330 67081074 + MGP_WSBEiJ_P0000144 IG_V_gene IG_V_gene MGP_WSBEiJ_T0075662.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342275 32411328 + Agbl3 protein_coding retained_intron MGP_WSBEiJ_T0075663.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342275 32426616 + MGP_WSBEiJ_P0075663 Agbl3 protein_coding protein_coding MGP_WSBEiJ_T0075664.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342275 32426616 + MGP_WSBEiJ_P0075664 Agbl3 protein_coding protein_coding MGP_WSBEiJ_T0075665.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342285 32366501 + MGP_WSBEiJ_P0075665 Agbl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075666.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342295 32361740 + Agbl3 protein_coding retained_intron MGP_WSBEiJ_T0075667.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342691 32428144 + MGP_WSBEiJ_P0075667 Agbl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075668.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342718 32368344 + Agbl3 protein_coding retained_intron MGP_WSBEiJ_T0075669.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342718 32347560 + MGP_WSBEiJ_P0075669 Agbl3 protein_coding protein_coding MGP_WSBEiJ_T0075670.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342719 32364308 + Agbl3 protein_coding retained_intron MGP_WSBEiJ_T0075671.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342732 32347485 + MGP_WSBEiJ_P0075671 Agbl3 protein_coding protein_coding MGP_WSBEiJ_T0075672.1 MGP_WSBEiJ_G0029736.1 mouse_genomes_project 6 32342733 32347524 + MGP_WSBEiJ_P0075672 Agbl3 protein_coding protein_coding MGP_WSBEiJ_T0002136.1 MGP_WSBEiJ_G0002055.1 mouse_genomes_project 6 149755545 149758415 + TEC TEC MGP_WSBEiJ_T0098459.1 MGP_WSBEiJ_G0037122.1 mouse_genomes_project 6 152957909 152958013 - Gm23462 snRNA snRNA MGP_WSBEiJ_T0002078.1 MGP_WSBEiJ_G0001998.1 mouse_genomes_project 6 115151321 115153814 - TEC TEC MGP_WSBEiJ_T0077241.1 MGP_WSBEiJ_G0030129.1 mouse_genomes_project 6 86390528 86404262 - MGP_WSBEiJ_P0077241 protein_coding protein_coding MGP_WSBEiJ_T0077244.1 MGP_WSBEiJ_G0030129.1 mouse_genomes_project 6 86390764 86392368 - MGP_WSBEiJ_P0077244 protein_coding protein_coding MGP_WSBEiJ_T0014843.1 MGP_WSBEiJ_G0012973.1 mouse_genomes_project 6 35344963 35345920 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098402.1 MGP_WSBEiJ_G0037065.1 mouse_genomes_project 6 11317336 11317442 - Gm23013 snRNA snRNA MGP_WSBEiJ_T0075255.1 MGP_WSBEiJ_G0029661.1 mouse_genomes_project 6 20430031 20433330 - MGP_WSBEiJ_P0075255 Fezf1 protein_coding protein_coding MGP_WSBEiJ_T0076437.1 MGP_WSBEiJ_G0029943.1 mouse_genomes_project 6 53713074 53742061 - MGP_WSBEiJ_P0076437 Crhr2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0076438.1 MGP_WSBEiJ_G0029943.1 mouse_genomes_project 6 53713084 53758515 - MGP_WSBEiJ_P0076438 Crhr2 protein_coding protein_coding MGP_WSBEiJ_T0076439.1 MGP_WSBEiJ_G0029943.1 mouse_genomes_project 6 53714221 53742275 - MGP_WSBEiJ_P0076439 Crhr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076440.1 MGP_WSBEiJ_G0029943.1 mouse_genomes_project 6 53714248 53742203 - MGP_WSBEiJ_P0076440 Crhr2 protein_coding protein_coding MGP_WSBEiJ_T0076441.1 MGP_WSBEiJ_G0029943.1 mouse_genomes_project 6 53715075 53758342 - MGP_WSBEiJ_P0076441 Crhr2 protein_coding protein_coding MGP_WSBEiJ_T0076442.1 MGP_WSBEiJ_G0029943.1 mouse_genomes_project 6 53717224 53724839 - Crhr2 protein_coding retained_intron MGP_WSBEiJ_T0076443.1 MGP_WSBEiJ_G0029943.1 mouse_genomes_project 6 53722899 53758517 - Crhr2 protein_coding retained_intron MGP_WSBEiJ_T0076444.1 MGP_WSBEiJ_G0029943.1 mouse_genomes_project 6 53729035 53742061 - Crhr2 protein_coding retained_intron MGP_WSBEiJ_T0011425.1 MGP_WSBEiJ_G0009582.1 mouse_genomes_project 6 14667733 14667842 + Gm27762 misc_RNA misc_RNA MGP_WSBEiJ_T0000046.1 MGP_WSBEiJ_G0000038.1 mouse_genomes_project 6 70561198 70561234 + Igkj3 IG_J_gene processed_transcript MGP_WSBEiJ_T0000047.1 MGP_WSBEiJ_G0000038.1 mouse_genomes_project 6 70561198 70561236 + MGP_WSBEiJ_P0000047 Igkj3 IG_J_gene IG_J_gene MGP_WSBEiJ_T0076645.1 MGP_WSBEiJ_G0030008.1 mouse_genomes_project 6 65858548 65870356 + MGP_WSBEiJ_P0076645 Mad2l1 protein_coding protein_coding MGP_WSBEiJ_T0076646.1 MGP_WSBEiJ_G0030008.1 mouse_genomes_project 6 65858583 65864155 + Mad2l1 protein_coding retained_intron MGP_WSBEiJ_T0076647.1 MGP_WSBEiJ_G0030008.1 mouse_genomes_project 6 65858626 65864126 + MGP_WSBEiJ_P0076647 Mad2l1 protein_coding protein_coding MGP_WSBEiJ_T0076648.1 MGP_WSBEiJ_G0030008.1 mouse_genomes_project 6 65858836 65859232 + Mad2l1 protein_coding processed_transcript MGP_WSBEiJ_T0079598.1 MGP_WSBEiJ_G0030635.1 mouse_genomes_project 6 146456620 146480067 - MGP_WSBEiJ_P0079598 Sult6b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079599.1 MGP_WSBEiJ_G0030635.1 mouse_genomes_project 6 146457196 146480031 - MGP_WSBEiJ_P0079599 Sult6b2 protein_coding protein_coding MGP_WSBEiJ_T0002125.1 MGP_WSBEiJ_G0002044.1 mouse_genomes_project 6 143335270 143336923 + TEC TEC MGP_WSBEiJ_T0075639.1 MGP_WSBEiJ_G0029734.1 mouse_genomes_project 6 32018934 32048382 + MGP_WSBEiJ_P0075639 Bpgm protein_coding protein_coding MGP_WSBEiJ_T0075640.1 MGP_WSBEiJ_G0029734.1 mouse_genomes_project 6 32019083 32031848 + Bpgm protein_coding retained_intron MGP_WSBEiJ_T0075641.1 MGP_WSBEiJ_G0029734.1 mouse_genomes_project 6 32019179 32030452 + MGP_WSBEiJ_P0075641 Bpgm protein_coding protein_coding MGP_WSBEiJ_T0075642.1 MGP_WSBEiJ_G0029734.1 mouse_genomes_project 6 32019206 32030512 + MGP_WSBEiJ_P0075642 Bpgm protein_coding protein_coding MGP_WSBEiJ_T0075643.1 MGP_WSBEiJ_G0029734.1 mouse_genomes_project 6 32019870 32030613 + MGP_WSBEiJ_P0075643 Bpgm protein_coding protein_coding MGP_WSBEiJ_T0015013.1 MGP_WSBEiJ_G0013143.1 mouse_genomes_project 6 88666641 88667055 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076333.1 MGP_WSBEiJ_G0029922.1 mouse_genomes_project 6 50718282 50722024 - MGP_WSBEiJ_P0076333 Hoxa10 protein_coding protein_coding MGP_WSBEiJ_T0076334.1 MGP_WSBEiJ_G0029922.1 mouse_genomes_project 6 50718284 50720409 - Hoxa10 protein_coding processed_transcript MGP_WSBEiJ_T0076335.1 MGP_WSBEiJ_G0029922.1 mouse_genomes_project 6 50719006 50727939 - MGP_WSBEiJ_P0076335 Hoxa10 protein_coding protein_coding MGP_WSBEiJ_T0076336.1 MGP_WSBEiJ_G0029922.1 mouse_genomes_project 6 50719166 50727880 - Hoxa10 protein_coding processed_transcript MGP_WSBEiJ_T0014895.1 MGP_WSBEiJ_G0013025.1 mouse_genomes_project 6 50852256 50852537 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015152.1 MGP_WSBEiJ_G0013282.1 mouse_genomes_project 6 135481621 135481838 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076515.1 MGP_WSBEiJ_G0029970.1 mouse_genomes_project 6 56107657 56108770 - MGP_WSBEiJ_P0076515 Vmn1r17 protein_coding protein_coding MGP_WSBEiJ_T0077330.1 MGP_WSBEiJ_G0030146.1 mouse_genomes_project 6 87077567 87112508 + MGP_WSBEiJ_P0077330 C87436 protein_coding protein_coding MGP_WSBEiJ_T0077331.1 MGP_WSBEiJ_G0030146.1 mouse_genomes_project 6 87077582 87086011 + MGP_WSBEiJ_P0077331 C87436 protein_coding protein_coding MGP_WSBEiJ_T0077332.1 MGP_WSBEiJ_G0030146.1 mouse_genomes_project 6 87077885 87112508 + MGP_WSBEiJ_P0077332 C87436 protein_coding protein_coding MGP_WSBEiJ_T0077333.1 MGP_WSBEiJ_G0030146.1 mouse_genomes_project 6 87077885 87112508 + MGP_WSBEiJ_P0077333 C87436 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077334.1 MGP_WSBEiJ_G0030146.1 mouse_genomes_project 6 87077901 87078682 + C87436 protein_coding processed_transcript MGP_WSBEiJ_T0077335.1 MGP_WSBEiJ_G0030146.1 mouse_genomes_project 6 87077920 87112508 + MGP_WSBEiJ_P0077335 C87436 protein_coding protein_coding MGP_WSBEiJ_T0077336.1 MGP_WSBEiJ_G0030146.1 mouse_genomes_project 6 87082933 87115619 + MGP_WSBEiJ_P0077336 C87436 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077337.1 MGP_WSBEiJ_G0030146.1 mouse_genomes_project 6 87106157 87112067 + C87436 protein_coding processed_transcript MGP_WSBEiJ_T0014983.1 MGP_WSBEiJ_G0013113.1 mouse_genomes_project 6 75885075 75885570 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079154.1 MGP_WSBEiJ_G0030511.1 mouse_genomes_project 6 131873513 131883122 - MGP_WSBEiJ_P0079154 4922502D21Rik protein_coding protein_coding MGP_WSBEiJ_T0079155.1 MGP_WSBEiJ_G0030511.1 mouse_genomes_project 6 131874196 131878040 - MGP_WSBEiJ_P0079155 4922502D21Rik protein_coding protein_coding MGP_WSBEiJ_T0075270.1 MGP_WSBEiJ_G0029664.1 mouse_genomes_project 6 20843371 20844610 - MGP_WSBEiJ_P0075270 Rnf148 protein_coding protein_coding MGP_WSBEiJ_T0076466.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54744589 55028887 - MGP_WSBEiJ_P0076466 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076467.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54746462 55230259 - MGP_WSBEiJ_P0076467 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076468.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54747072 55028339 - Pde1c protein_coding processed_transcript MGP_WSBEiJ_T0076469.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54752859 55029014 - MGP_WSBEiJ_P0076469 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076470.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54756968 55036049 - MGP_WSBEiJ_P0076470 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076471.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54757083 54799658 - MGP_WSBEiJ_P0076471 Pde1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076472.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54757136 55036068 - MGP_WSBEiJ_P0076472 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076473.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54775925 55028795 - MGP_WSBEiJ_P0076473 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076474.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54779485 55036097 - MGP_WSBEiJ_P0076474 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076475.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54781194 55029309 - MGP_WSBEiJ_P0076475 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076476.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54781647 55028861 - MGP_WSBEiJ_P0076476 Pde1c protein_coding protein_coding MGP_WSBEiJ_T0076477.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 54855333 55028869 - Pde1c protein_coding retained_intron MGP_WSBEiJ_T0076478.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 55008305 55028797 - Pde1c protein_coding retained_intron MGP_WSBEiJ_T0076479.1 MGP_WSBEiJ_G0029952.1 mouse_genomes_project 6 55011522 55036070 - Pde1c protein_coding retained_intron MGP_WSBEiJ_T0077245.1 MGP_WSBEiJ_G0030130.1 mouse_genomes_project 6 86390989 86391672 - MGP_WSBEiJ_P0077245 protein_coding protein_coding MGP_WSBEiJ_T0014900.1 MGP_WSBEiJ_G0013030.1 mouse_genomes_project 6 52320841 52321598 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004976.1 MGP_WSBEiJ_G0004245.1 mouse_genomes_project 6 113702445 113705660 - 5031434C07Rik antisense antisense MGP_WSBEiJ_T0004977.1 MGP_WSBEiJ_G0004245.1 mouse_genomes_project 6 113702679 113705661 - 5031434C07Rik antisense antisense MGP_WSBEiJ_T0076544.1 MGP_WSBEiJ_G0029984.1 mouse_genomes_project 6 57125614 57126516 - MGP_WSBEiJ_P0076544 Vmn1r27 protein_coding protein_coding MGP_WSBEiJ_T0004956.1 MGP_WSBEiJ_G0004234.1 mouse_genomes_project 6 92890764 92894488 - 4930466I24Rik antisense antisense MGP_WSBEiJ_T0100945.1 MGP_WSBEiJ_G0039402.1 mouse_genomes_project 6 135947874 135948867 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015105.1 MGP_WSBEiJ_G0013235.1 mouse_genomes_project 6 123853104 123853236 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099639.1 MGP_WSBEiJ_G0038302.1 mouse_genomes_project 6 26561203 26561334 + Gm26021 snoRNA snoRNA MGP_WSBEiJ_T0008524.1 MGP_WSBEiJ_G0006897.1 mouse_genomes_project 6 88379089 88397058 - 1810020O05Rik lincRNA lincRNA MGP_WSBEiJ_T0079121.1 MGP_WSBEiJ_G0030501.1 mouse_genomes_project 6 131069444 131084439 + MGP_WSBEiJ_P0079121 Clec2h protein_coding protein_coding MGP_WSBEiJ_T0079122.1 MGP_WSBEiJ_G0030501.1 mouse_genomes_project 6 131069445 131082033 + MGP_WSBEiJ_P0079122 Clec2h protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079123.1 MGP_WSBEiJ_G0030501.1 mouse_genomes_project 6 131069446 131081824 + MGP_WSBEiJ_P0079123 Clec2h protein_coding protein_coding MGP_WSBEiJ_T0079124.1 MGP_WSBEiJ_G0030501.1 mouse_genomes_project 6 131069450 131082026 + Clec2h protein_coding retained_intron MGP_WSBEiJ_T0014914.1 MGP_WSBEiJ_G0013044.1 mouse_genomes_project 6 59965678 59967041 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002075.1 MGP_WSBEiJ_G0001995.1 mouse_genomes_project 6 114485464 114487581 - TEC TEC MGP_WSBEiJ_T0079239.1 MGP_WSBEiJ_G0030543.1 mouse_genomes_project 6 135173852 135174906 - MGP_WSBEiJ_P0079239 Gm8882 protein_coding protein_coding MGP_WSBEiJ_T0010581.1 MGP_WSBEiJ_G0008738.1 mouse_genomes_project 6 26745031 26745174 - Gm44354 miRNA miRNA MGP_WSBEiJ_T0100938.1 MGP_WSBEiJ_G0039395.1 mouse_genomes_project 6 133199045 133221279 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004949.1 MGP_WSBEiJ_G0004228.1 mouse_genomes_project 6 89455580 89465022 - Gm26588 antisense antisense MGP_WSBEiJ_T0004950.1 MGP_WSBEiJ_G0004228.1 mouse_genomes_project 6 89458400 89463663 - Gm26588 antisense antisense MGP_WSBEiJ_T0010635.1 MGP_WSBEiJ_G0008792.1 mouse_genomes_project 6 127330732 127330819 + Mir3098 miRNA miRNA MGP_WSBEiJ_T0077670.1 MGP_WSBEiJ_G0030219.1 mouse_genomes_project 6 92341645 92368228 - MGP_WSBEiJ_P0077670 Xpc protein_coding protein_coding MGP_WSBEiJ_T0077671.1 MGP_WSBEiJ_G0030219.1 mouse_genomes_project 6 92344613 92368135 - MGP_WSBEiJ_P0077671 Xpc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077672.1 MGP_WSBEiJ_G0030219.1 mouse_genomes_project 6 92359256 92368224 - MGP_WSBEiJ_P0077672 Xpc protein_coding protein_coding MGP_WSBEiJ_T0076004.1 MGP_WSBEiJ_G0029835.1 mouse_genomes_project 6 40636198 40681274 - MGP_WSBEiJ_P0076004 Tcaf1 protein_coding protein_coding MGP_WSBEiJ_T0076005.1 MGP_WSBEiJ_G0029835.1 mouse_genomes_project 6 40638136 40663189 - MGP_WSBEiJ_P0076005 Tcaf1 protein_coding protein_coding MGP_WSBEiJ_T0076006.1 MGP_WSBEiJ_G0029835.1 mouse_genomes_project 6 40639225 40663161 - MGP_WSBEiJ_P0076006 Tcaf1 protein_coding protein_coding MGP_WSBEiJ_T0076007.1 MGP_WSBEiJ_G0029835.1 mouse_genomes_project 6 40645695 40663105 - Tcaf1 protein_coding retained_intron MGP_WSBEiJ_T0076008.1 MGP_WSBEiJ_G0029835.1 mouse_genomes_project 6 40648025 40681257 - Tcaf1 protein_coding processed_transcript MGP_WSBEiJ_T0076009.1 MGP_WSBEiJ_G0029835.1 mouse_genomes_project 6 40655329 40681257 - Tcaf1 protein_coding retained_intron MGP_WSBEiJ_T0076010.1 MGP_WSBEiJ_G0029835.1 mouse_genomes_project 6 40660400 40663110 - Tcaf1 protein_coding processed_transcript MGP_WSBEiJ_T0076011.1 MGP_WSBEiJ_G0029835.1 mouse_genomes_project 6 40680282 40681258 - Tcaf1 protein_coding processed_transcript MGP_WSBEiJ_T0004868.1 MGP_WSBEiJ_G0004178.1 mouse_genomes_project 6 47260006 47273008 - 4930563H07Rik antisense antisense MGP_WSBEiJ_T0079524.1 MGP_WSBEiJ_G0030615.1 mouse_genomes_project 6 144373636 144404591 + MGP_WSBEiJ_P0079524 Gm11077 protein_coding protein_coding MGP_WSBEiJ_T0076247.1 MGP_WSBEiJ_G0029901.1 mouse_genomes_project 6 48143506 48150311 + MGP_WSBEiJ_P0076247 Npy protein_coding protein_coding MGP_WSBEiJ_T0015066.1 MGP_WSBEiJ_G0013196.1 mouse_genomes_project 6 111002067 111002320 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100192.1 MGP_WSBEiJ_G0038759.1 mouse_genomes_project 6 46752258 46773178 + transcribed_unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100193.1 MGP_WSBEiJ_G0038759.1 mouse_genomes_project 6 46752311 46783918 + transcribed_unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100194.1 MGP_WSBEiJ_G0038759.1 mouse_genomes_project 6 46756086 46779526 + transcribed_unitary_pseudogene transcribed_unitary_pseudogene MGP_WSBEiJ_T0100195.1 MGP_WSBEiJ_G0038759.1 mouse_genomes_project 6 46760204 46781590 + transcribed_unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100196.1 MGP_WSBEiJ_G0038759.1 mouse_genomes_project 6 46760261 46777600 + transcribed_unitary_pseudogene processed_transcript MGP_WSBEiJ_T0014879.1 MGP_WSBEiJ_G0013009.1 mouse_genomes_project 6 47268615 47271045 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098425.1 MGP_WSBEiJ_G0037088.1 mouse_genomes_project 6 76335920 76336081 - Gm22283 snRNA snRNA MGP_WSBEiJ_T0099682.1 MGP_WSBEiJ_G0038345.1 mouse_genomes_project 6 125665658 125665818 - Gm22724 snoRNA snoRNA MGP_WSBEiJ_T0001875.1 MGP_WSBEiJ_G0001795.1 mouse_genomes_project 6 2047728 2049554 + TEC TEC MGP_WSBEiJ_T0077139.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84287796 84350663 + MGP_WSBEiJ_P0077139 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077140.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84287797 84364648 + MGP_WSBEiJ_P0077140 Zfp638 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077141.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333828 84412774 + MGP_WSBEiJ_P0077141 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077142.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333832 84353383 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0077143.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333832 84364624 + Zfp638 protein_coding processed_transcript MGP_WSBEiJ_T0077144.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333834 84378337 + MGP_WSBEiJ_P0077144 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077145.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333835 84387782 + MGP_WSBEiJ_P0077145 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077146.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333851 84409108 + MGP_WSBEiJ_P0077146 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077147.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333851 84409110 + MGP_WSBEiJ_P0077147 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077148.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333853 84408888 + MGP_WSBEiJ_P0077148 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077149.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333856 84335358 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0077150.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84333858 84364660 + Zfp638 protein_coding processed_transcript MGP_WSBEiJ_T0077151.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84350395 84409110 + MGP_WSBEiJ_P0077151 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077152.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84350395 84408862 + MGP_WSBEiJ_P0077152 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077153.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84364266 84366346 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0077154.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84369524 84391478 + MGP_WSBEiJ_P0077154 Zfp638 protein_coding protein_coding MGP_WSBEiJ_T0077155.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84384294 84389094 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0077156.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84387837 84390065 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0077157.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84401848 84404076 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0077158.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84405840 84409108 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0077159.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84405840 84408812 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0077160.1 MGP_WSBEiJ_G0030112.1 mouse_genomes_project 6 84406592 84408856 + Zfp638 protein_coding retained_intron MGP_WSBEiJ_T0098451.1 MGP_WSBEiJ_G0037114.1 mouse_genomes_project 6 132642176 132642250 + Gm23552 snRNA snRNA MGP_WSBEiJ_T0076685.1 MGP_WSBEiJ_G0030016.1 mouse_genomes_project 6 66648720 66698758 - MGP_WSBEiJ_P0076685 Il12rb2 protein_coding protein_coding MGP_WSBEiJ_T0076686.1 MGP_WSBEiJ_G0030016.1 mouse_genomes_project 6 66649434 66739232 - MGP_WSBEiJ_P0076686 Il12rb2 protein_coding protein_coding MGP_WSBEiJ_T0076023.1 MGP_WSBEiJ_G0029844.1 mouse_genomes_project 6 40924057 41160728 + MGP_WSBEiJ_P0076023 protein_coding protein_coding MGP_WSBEiJ_T0076026.1 MGP_WSBEiJ_G0029844.1 mouse_genomes_project 6 41159795 41160728 + MGP_WSBEiJ_P0076026 protein_coding protein_coding MGP_WSBEiJ_T0002677.1 MGP_WSBEiJ_G0002561.1 mouse_genomes_project 6 39125079 39125736 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0004858.1 MGP_WSBEiJ_G0004169.1 mouse_genomes_project 6 37381698 37391136 - Gm16272 antisense antisense MGP_WSBEiJ_T0077871.1 MGP_WSBEiJ_G0030260.1 mouse_genomes_project 6 102417812 102659932 - MGP_WSBEiJ_P0077871 Pdzrn3 protein_coding protein_coding MGP_WSBEiJ_T0077872.1 MGP_WSBEiJ_G0030260.1 mouse_genomes_project 6 102426560 102637375 - Pdzrn3 protein_coding processed_transcript MGP_WSBEiJ_T0077873.1 MGP_WSBEiJ_G0030260.1 mouse_genomes_project 6 102439193 102468341 - Pdzrn3 protein_coding retained_intron MGP_WSBEiJ_T0077874.1 MGP_WSBEiJ_G0030260.1 mouse_genomes_project 6 102449224 102659377 - Pdzrn3 protein_coding processed_transcript MGP_WSBEiJ_T0098406.1 MGP_WSBEiJ_G0037069.1 mouse_genomes_project 6 26431724 26431890 - Gm25589 snRNA snRNA MGP_WSBEiJ_T0100949.1 MGP_WSBEiJ_G0039406.1 mouse_genomes_project 6 136095055 136098244 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015179.1 MGP_WSBEiJ_G0013309.1 mouse_genomes_project 6 143710815 143711257 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008536.1 MGP_WSBEiJ_G0006904.1 mouse_genomes_project 6 91289935 91291123 + Gm44421 lincRNA lincRNA MGP_WSBEiJ_T0004880.1 MGP_WSBEiJ_G0004184.1 mouse_genomes_project 6 50802450 50808898 - Evx1os antisense antisense MGP_WSBEiJ_T0004881.1 MGP_WSBEiJ_G0004184.1 mouse_genomes_project 6 50804897 50807571 - Evx1os antisense antisense MGP_WSBEiJ_T0079066.1 MGP_WSBEiJ_G0030488.1 mouse_genomes_project 6 130683514 130724612 - MGP_WSBEiJ_P0079066 Tulp3 protein_coding protein_coding MGP_WSBEiJ_T0079067.1 MGP_WSBEiJ_G0030488.1 mouse_genomes_project 6 130686281 130688808 - Tulp3 protein_coding processed_transcript MGP_WSBEiJ_T0079068.1 MGP_WSBEiJ_G0030488.1 mouse_genomes_project 6 130697692 130724602 - Tulp3 protein_coding retained_intron MGP_WSBEiJ_T0079069.1 MGP_WSBEiJ_G0030488.1 mouse_genomes_project 6 130700384 130724576 - MGP_WSBEiJ_P0079069 Tulp3 protein_coding protein_coding MGP_WSBEiJ_T0079070.1 MGP_WSBEiJ_G0030488.1 mouse_genomes_project 6 130707357 130710792 - Tulp3 protein_coding retained_intron MGP_WSBEiJ_T0079071.1 MGP_WSBEiJ_G0030488.1 mouse_genomes_project 6 130708061 130724586 - MGP_WSBEiJ_P0079071 Tulp3 protein_coding protein_coding MGP_WSBEiJ_T0098448.1 MGP_WSBEiJ_G0037111.1 mouse_genomes_project 6 128073308 128073418 + Gm24947 snRNA snRNA MGP_WSBEiJ_T0100314.1 MGP_WSBEiJ_G0038812.1 mouse_genomes_project 6 136837654 136996028 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100315.1 MGP_WSBEiJ_G0038812.1 mouse_genomes_project 6 136837654 136996029 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100316.1 MGP_WSBEiJ_G0038812.1 mouse_genomes_project 6 136993919 136996028 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0004992.1 MGP_WSBEiJ_G0004257.1 mouse_genomes_project 6 121171228 121178342 + Gm44317 antisense antisense MGP_WSBEiJ_T0014795.1 MGP_WSBEiJ_G0012925.1 mouse_genomes_project 6 7186058 7186683 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008618.1 MGP_WSBEiJ_G0006969.1 mouse_genomes_project 6 143138160 143141639 - lincRNA lincRNA MGP_WSBEiJ_T0014861.1 MGP_WSBEiJ_G0012991.1 mouse_genomes_project 6 41789083 41789829 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078685.1 MGP_WSBEiJ_G0030409.1 mouse_genomes_project 6 124994887 125019505 + MGP_WSBEiJ_P0078685 Clec4a2 protein_coding protein_coding MGP_WSBEiJ_T0078686.1 MGP_WSBEiJ_G0030409.1 mouse_genomes_project 6 125018522 125023933 + MGP_WSBEiJ_P0078686 Clec4a2 protein_coding protein_coding MGP_WSBEiJ_T0078687.1 MGP_WSBEiJ_G0030409.1 mouse_genomes_project 6 125018524 125028451 + MGP_WSBEiJ_P0078687 Clec4a2 protein_coding protein_coding MGP_WSBEiJ_T0078688.1 MGP_WSBEiJ_G0030409.1 mouse_genomes_project 6 125019150 125032477 + MGP_WSBEiJ_P0078688 Clec4a2 protein_coding protein_coding MGP_WSBEiJ_T0076161.1 MGP_WSBEiJ_G0029879.1 mouse_genomes_project 6 46900456 46912532 + MGP_WSBEiJ_P0076161 Gimap8 protein_coding protein_coding MGP_WSBEiJ_T0078239.1 MGP_WSBEiJ_G0030326.1 mouse_genomes_project 6 117250145 117253288 - MGP_WSBEiJ_P0078239 Rpl32 protein_coding protein_coding MGP_WSBEiJ_T0078240.1 MGP_WSBEiJ_G0030326.1 mouse_genomes_project 6 117250152 117252889 - MGP_WSBEiJ_P0078240 Rpl32 protein_coding protein_coding MGP_WSBEiJ_T0008559.1 MGP_WSBEiJ_G0006922.1 mouse_genomes_project 6 106851129 106854956 - lincRNA lincRNA MGP_WSBEiJ_T0004925.1 MGP_WSBEiJ_G0004215.1 mouse_genomes_project 6 86566720 86610749 + Gm19265 antisense antisense MGP_WSBEiJ_T0015143.1 MGP_WSBEiJ_G0013273.1 mouse_genomes_project 6 133245713 133245834 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004830.1 MGP_WSBEiJ_G0004145.1 mouse_genomes_project 6 14164717 14355511 - Gm15581 antisense antisense MGP_WSBEiJ_T0079220.1 MGP_WSBEiJ_G0030532.1 mouse_genomes_project 6 134207688 134223596 - MGP_WSBEiJ_P0079220 Styk1 protein_coding protein_coding MGP_WSBEiJ_T0079221.1 MGP_WSBEiJ_G0030532.1 mouse_genomes_project 6 134208678 134226135 - MGP_WSBEiJ_P0079221 Styk1 protein_coding protein_coding MGP_WSBEiJ_T0079222.1 MGP_WSBEiJ_G0030532.1 mouse_genomes_project 6 134220952 134272291 - Styk1 protein_coding processed_transcript MGP_WSBEiJ_T0079223.1 MGP_WSBEiJ_G0030532.1 mouse_genomes_project 6 134256213 134272288 - Styk1 protein_coding processed_transcript MGP_WSBEiJ_T0079224.1 MGP_WSBEiJ_G0030532.1 mouse_genomes_project 6 134270669 134272291 - Styk1 protein_coding retained_intron MGP_WSBEiJ_T0077663.1 MGP_WSBEiJ_G0030217.1 mouse_genomes_project 6 92313518 92325887 - MGP_WSBEiJ_P0077663 Chchd4 protein_coding protein_coding MGP_WSBEiJ_T0077664.1 MGP_WSBEiJ_G0030217.1 mouse_genomes_project 6 92323936 92325790 - Chchd4 protein_coding retained_intron MGP_WSBEiJ_T0076511.1 MGP_WSBEiJ_G0029966.1 mouse_genomes_project 6 55960394 55961299 + MGP_WSBEiJ_P0076511 Vmn1r13 protein_coding protein_coding MGP_WSBEiJ_T0002103.1 MGP_WSBEiJ_G0002022.1 mouse_genomes_project 6 130089552 130092320 - TEC TEC MGP_WSBEiJ_T0008521.1 MGP_WSBEiJ_G0006894.1 mouse_genomes_project 6 87346710 87347316 - Gm44214 lincRNA lincRNA MGP_WSBEiJ_T0076798.1 MGP_WSBEiJ_G0030042.1 mouse_genomes_project 6 72307179 72311079 + 0610030E20Rik protein_coding retained_intron MGP_WSBEiJ_T0076799.1 MGP_WSBEiJ_G0030042.1 mouse_genomes_project 6 72307188 72309038 + 0610030E20Rik protein_coding retained_intron MGP_WSBEiJ_T0076800.1 MGP_WSBEiJ_G0030042.1 mouse_genomes_project 6 72307196 72312987 + MGP_WSBEiJ_P0076800 0610030E20Rik protein_coding protein_coding MGP_WSBEiJ_T0076801.1 MGP_WSBEiJ_G0030042.1 mouse_genomes_project 6 72307229 72310480 + 0610030E20Rik protein_coding retained_intron MGP_WSBEiJ_T0075845.1 MGP_WSBEiJ_G0029774.1 mouse_genomes_project 6 37383363 37394945 + MGP_WSBEiJ_P0075845 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099661.1 MGP_WSBEiJ_G0038324.1 mouse_genomes_project 6 73175930 73176126 - Gm24533 snoRNA snoRNA MGP_WSBEiJ_T0014906.1 MGP_WSBEiJ_G0013036.1 mouse_genomes_project 6 57401562 57401726 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076256.1 MGP_WSBEiJ_G0029903.1 mouse_genomes_project 6 48519677 48524308 - Dfna5 protein_coding retained_intron MGP_WSBEiJ_T0076257.1 MGP_WSBEiJ_G0029903.1 mouse_genomes_project 6 48520157 48596099 - MGP_WSBEiJ_P0076257 Dfna5 protein_coding protein_coding MGP_WSBEiJ_T0076259.1 MGP_WSBEiJ_G0029903.1 mouse_genomes_project 6 48532808 48596091 - MGP_WSBEiJ_P0076259 Dfna5 protein_coding protein_coding MGP_WSBEiJ_T0076260.1 MGP_WSBEiJ_G0029903.1 mouse_genomes_project 6 48539986 48598206 - MGP_WSBEiJ_P0076260 Dfna5 protein_coding protein_coding MGP_WSBEiJ_T0076261.1 MGP_WSBEiJ_G0029903.1 mouse_genomes_project 6 48539988 48596113 - MGP_WSBEiJ_P0076261 Dfna5 protein_coding protein_coding MGP_WSBEiJ_T0076262.1 MGP_WSBEiJ_G0029903.1 mouse_genomes_project 6 48579545 48596370 - MGP_WSBEiJ_P0076262 Dfna5 protein_coding protein_coding MGP_WSBEiJ_T0076263.1 MGP_WSBEiJ_G0029903.1 mouse_genomes_project 6 48593724 48596319 - Dfna5 protein_coding retained_intron MGP_WSBEiJ_T0100897.1 MGP_WSBEiJ_G0039355.1 mouse_genomes_project 6 41142714 41143021 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002058.1 MGP_WSBEiJ_G0001978.1 mouse_genomes_project 6 101916976 101918424 - TEC TEC MGP_WSBEiJ_T0076957.1 MGP_WSBEiJ_G0030077.1 mouse_genomes_project 6 83315267 83402368 + MGP_WSBEiJ_P0076957 M1ap protein_coding protein_coding MGP_WSBEiJ_T0076958.1 MGP_WSBEiJ_G0030077.1 mouse_genomes_project 6 83376870 83402122 + MGP_WSBEiJ_P0076958 M1ap protein_coding unknown_likely_coding MGP_WSBEiJ_T0076959.1 MGP_WSBEiJ_G0030077.1 mouse_genomes_project 6 83398534 83402494 + MGP_WSBEiJ_P0076959 M1ap protein_coding protein_coding MGP_WSBEiJ_T0076960.1 MGP_WSBEiJ_G0030077.1 mouse_genomes_project 6 83400452 83402008 + M1ap protein_coding retained_intron MGP_WSBEiJ_T0000148.1 MGP_WSBEiJ_G0000112.1 mouse_genomes_project 6 67313067 67313538 + MGP_WSBEiJ_P0000148 Igkv14-126 IG_V_gene IG_V_gene MGP_WSBEiJ_T0079086.1 MGP_WSBEiJ_G0030491.1 mouse_genomes_project 6 130745044 130754676 + MGP_WSBEiJ_P0079086 4933413G19Rik protein_coding protein_coding MGP_WSBEiJ_T0079087.1 MGP_WSBEiJ_G0030491.1 mouse_genomes_project 6 130745044 130755339 + MGP_WSBEiJ_P0079087 4933413G19Rik protein_coding protein_coding MGP_WSBEiJ_T0075026.1 MGP_WSBEiJ_G0029622.1 mouse_genomes_project 6 5058710 5062803 - MGP_WSBEiJ_P0075026 Rpa3 protein_coding protein_coding MGP_WSBEiJ_T0077577.1 MGP_WSBEiJ_G0030192.1 mouse_genomes_project 6 90487081 90648215 + MGP_WSBEiJ_P0077577 Vmn1r41 protein_coding protein_coding MGP_WSBEiJ_T0014866.1 MGP_WSBEiJ_G0012996.1 mouse_genomes_project 6 44869425 44869873 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078523.1 MGP_WSBEiJ_G0030373.1 mouse_genomes_project 6 122020659 122106825 + MGP_WSBEiJ_P0078523 protein_coding protein_coding MGP_WSBEiJ_T0078524.1 MGP_WSBEiJ_G0030373.1 mouse_genomes_project 6 122020659 122082223 + MGP_WSBEiJ_P0078524 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078525.1 MGP_WSBEiJ_G0030373.1 mouse_genomes_project 6 122020667 122026152 + protein_coding retained_intron MGP_WSBEiJ_T0078526.1 MGP_WSBEiJ_G0030373.1 mouse_genomes_project 6 122020993 122082196 + MGP_WSBEiJ_P0078526 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078527.1 MGP_WSBEiJ_G0030373.1 mouse_genomes_project 6 122032372 122047193 + MGP_WSBEiJ_P0078527 protein_coding protein_coding MGP_WSBEiJ_T0078528.1 MGP_WSBEiJ_G0030373.1 mouse_genomes_project 6 122067339 122075318 + protein_coding retained_intron MGP_WSBEiJ_T0078529.1 MGP_WSBEiJ_G0030373.1 mouse_genomes_project 6 122087075 122091243 + protein_coding retained_intron MGP_WSBEiJ_T0078530.1 MGP_WSBEiJ_G0030373.1 mouse_genomes_project 6 122091164 122101970 + protein_coding processed_transcript MGP_WSBEiJ_T0004888.1 MGP_WSBEiJ_G0004191.1 mouse_genomes_project 6 57964540 58000950 + BB365896 antisense antisense MGP_WSBEiJ_T0098433.1 MGP_WSBEiJ_G0037096.1 mouse_genomes_project 6 98642376 98642508 - Gm23510 snRNA snRNA MGP_WSBEiJ_T0004904.1 MGP_WSBEiJ_G0004204.1 mouse_genomes_project 6 82379449 82381586 - Gm15864 antisense antisense MGP_WSBEiJ_T0076025.1 MGP_WSBEiJ_G0029846.1 mouse_genomes_project 6 41159754 41160804 + MGP_WSBEiJ_P0076025 protein_coding protein_coding MGP_WSBEiJ_T0078098.1 MGP_WSBEiJ_G0030300.1 mouse_genomes_project 6 114977570 114994360 - MGP_WSBEiJ_P0078098 Emc3 protein_coding protein_coding MGP_WSBEiJ_T0078099.1 MGP_WSBEiJ_G0030300.1 mouse_genomes_project 6 114982487 114983604 - Emc3 protein_coding retained_intron MGP_WSBEiJ_T0078100.1 MGP_WSBEiJ_G0030300.1 mouse_genomes_project 6 114993110 114994326 - Emc3 protein_coding retained_intron MGP_WSBEiJ_T0076539.1 MGP_WSBEiJ_G0029979.1 mouse_genomes_project 6 56687994 56689090 - MGP_WSBEiJ_P0076539 Vmn1r22 protein_coding protein_coding MGP_WSBEiJ_T0076274.1 MGP_WSBEiJ_G0029905.1 mouse_genomes_project 6 48926058 48949368 - MGP_WSBEiJ_P0076274 4921507P07Rik protein_coding protein_coding MGP_WSBEiJ_T0014784.1 MGP_WSBEiJ_G0012914.1 mouse_genomes_project 6 3537619 3538684 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079360.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139865826 139928730 + MGP_WSBEiJ_P0079360 Atf7ip protein_coding protein_coding MGP_WSBEiJ_T0079361.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139878882 139973023 + MGP_WSBEiJ_P0079361 Atf7ip protein_coding protein_coding MGP_WSBEiJ_T0079362.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139878886 139925743 + MGP_WSBEiJ_P0079362 Atf7ip protein_coding protein_coding MGP_WSBEiJ_T0079363.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139878921 139944284 + MGP_WSBEiJ_P0079363 Atf7ip protein_coding protein_coding MGP_WSBEiJ_T0079364.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139878926 139884478 + Atf7ip protein_coding retained_intron MGP_WSBEiJ_T0079365.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139893203 139948549 + MGP_WSBEiJ_P0079365 Atf7ip protein_coding protein_coding MGP_WSBEiJ_T0079366.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139913120 139921856 + MGP_WSBEiJ_P0079366 Atf7ip protein_coding protein_coding MGP_WSBEiJ_T0079367.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139915960 139922039 + MGP_WSBEiJ_P0079367 Atf7ip protein_coding protein_coding MGP_WSBEiJ_T0079368.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139915978 139917174 + Atf7ip protein_coding retained_intron MGP_WSBEiJ_T0079369.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139922791 139934330 + MGP_WSBEiJ_P0079369 Atf7ip protein_coding protein_coding MGP_WSBEiJ_T0079370.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139939265 139944231 + Atf7ip protein_coding retained_intron MGP_WSBEiJ_T0079371.1 MGP_WSBEiJ_G0030586.1 mouse_genomes_project 6 139956446 139969067 + Atf7ip protein_coding retained_intron MGP_WSBEiJ_T0001892.1 MGP_WSBEiJ_G0001812.1 mouse_genomes_project 6 21875790 21879638 - TEC TEC MGP_WSBEiJ_T0002626.1 MGP_WSBEiJ_G0002516.1 mouse_genomes_project 6 39055329 39056034 + MGP_WSBEiJ_P0002626 Trbv20 TR_V_gene TR_V_gene MGP_WSBEiJ_T0078372.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119455536 119459615 - MGP_WSBEiJ_P0078372 Fxyd4 protein_coding protein_coding MGP_WSBEiJ_T0078373.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119455537 119459258 - MGP_WSBEiJ_P0078373 Fxyd4 protein_coding protein_coding MGP_WSBEiJ_T0078374.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119455537 119459258 - MGP_WSBEiJ_P0078374 Fxyd4 protein_coding protein_coding MGP_WSBEiJ_T0078375.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119455537 119459258 - MGP_WSBEiJ_P0078375 Fxyd4 protein_coding protein_coding MGP_WSBEiJ_T0078376.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119455537 119459258 - MGP_WSBEiJ_P0078376 Fxyd4 protein_coding protein_coding MGP_WSBEiJ_T0078377.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119455706 119459258 - MGP_WSBEiJ_P0078377 Fxyd4 protein_coding protein_coding MGP_WSBEiJ_T0078378.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119456812 119459258 - Fxyd4 protein_coding retained_intron MGP_WSBEiJ_T0078379.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119456818 119457856 - Fxyd4 protein_coding retained_intron MGP_WSBEiJ_T0078380.1 MGP_WSBEiJ_G0030351.1 mouse_genomes_project 6 119456820 119459258 - Fxyd4 protein_coding retained_intron MGP_WSBEiJ_T0008543.1 MGP_WSBEiJ_G0006911.1 mouse_genomes_project 6 99641632 99840511 - Gm44196 lincRNA lincRNA MGP_WSBEiJ_T0008545.1 MGP_WSBEiJ_G0006911.1 mouse_genomes_project 6 99806210 99840530 - Gm44196 lincRNA lincRNA MGP_WSBEiJ_T0008546.1 MGP_WSBEiJ_G0006911.1 mouse_genomes_project 6 99835540 99840560 - Gm44196 lincRNA lincRNA MGP_WSBEiJ_T0010579.1 MGP_WSBEiJ_G0008736.1 mouse_genomes_project 6 26337460 26337533 + Mir129-1 miRNA miRNA MGP_WSBEiJ_T0000302.1 MGP_WSBEiJ_G0000250.1 mouse_genomes_project 6 70285407 70285707 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0077798.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98338658 98550068 - MGP_WSBEiJ_P0077798 Frmd4b protein_coding protein_coding MGP_WSBEiJ_T0077799.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98338827 98343047 - Frmd4b protein_coding retained_intron MGP_WSBEiJ_T0077800.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98338877 98366669 - Frmd4b protein_coding processed_transcript MGP_WSBEiJ_T0077801.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98338883 98519842 - MGP_WSBEiJ_P0077801 Frmd4b protein_coding protein_coding MGP_WSBEiJ_T0077802.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98359757 98366719 - Frmd4b protein_coding retained_intron MGP_WSBEiJ_T0077803.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98360673 98378356 - Frmd4b protein_coding processed_transcript MGP_WSBEiJ_T0077804.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98363005 98409064 - Frmd4b protein_coding retained_intron MGP_WSBEiJ_T0077805.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98377873 98448109 - Frmd4b protein_coding processed_transcript MGP_WSBEiJ_T0077806.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98378531 98550117 - Frmd4b protein_coding processed_transcript MGP_WSBEiJ_T0077807.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98405819 98692848 - Frmd4b protein_coding retained_intron MGP_WSBEiJ_T0077808.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98447159 98448077 - Frmd4b protein_coding retained_intron MGP_WSBEiJ_T0077809.1 MGP_WSBEiJ_G0030248.1 mouse_genomes_project 6 98447627 98486225 - MGP_WSBEiJ_P0077809 Frmd4b protein_coding protein_coding MGP_WSBEiJ_T0097090.1 MGP_WSBEiJ_G0035771.1 mouse_genomes_project 6 148792249 148792364 - Gm23071 rRNA rRNA MGP_WSBEiJ_T0001993.1 MGP_WSBEiJ_G0001913.1 mouse_genomes_project 6 80719177 80721644 + TEC TEC MGP_WSBEiJ_T0079585.1 MGP_WSBEiJ_G0030632.1 mouse_genomes_project 6 146231920 146238719 - MGP_WSBEiJ_P0079585 Kcnj8 protein_coding protein_coding MGP_WSBEiJ_T0079586.1 MGP_WSBEiJ_G0030632.1 mouse_genomes_project 6 146231922 146238475 - MGP_WSBEiJ_P0079586 Kcnj8 protein_coding protein_coding MGP_WSBEiJ_T0078993.1 MGP_WSBEiJ_G0030470.1 mouse_genomes_project 6 128738040 128740903 - MGP_WSBEiJ_P0078993 Kcna5 protein_coding protein_coding MGP_WSBEiJ_T0077471.1 MGP_WSBEiJ_G0030176.1 mouse_genomes_project 6 88918447 88932780 + MGP_WSBEiJ_P0077471 Gata2 protein_coding protein_coding MGP_WSBEiJ_T0077472.1 MGP_WSBEiJ_G0030176.1 mouse_genomes_project 6 88922884 88932778 + MGP_WSBEiJ_P0077472 Gata2 protein_coding protein_coding MGP_WSBEiJ_T0077473.1 MGP_WSBEiJ_G0030176.1 mouse_genomes_project 6 88922884 88924210 + MGP_WSBEiJ_P0077473 Gata2 protein_coding protein_coding MGP_WSBEiJ_T0077474.1 MGP_WSBEiJ_G0030176.1 mouse_genomes_project 6 88925465 88927188 + Gata2 protein_coding retained_intron MGP_WSBEiJ_T0077475.1 MGP_WSBEiJ_G0030176.1 mouse_genomes_project 6 88930199 88931519 + Gata2 protein_coding retained_intron MGP_WSBEiJ_T0076626.1 MGP_WSBEiJ_G0030003.1 mouse_genomes_project 6 64660179 64731554 + MGP_WSBEiJ_P0076626 C130060K24Rik protein_coding protein_coding MGP_WSBEiJ_T0076627.1 MGP_WSBEiJ_G0030003.1 mouse_genomes_project 6 64660368 64736739 + MGP_WSBEiJ_P0076627 C130060K24Rik protein_coding protein_coding MGP_WSBEiJ_T0076628.1 MGP_WSBEiJ_G0030003.1 mouse_genomes_project 6 64719108 64731582 + MGP_WSBEiJ_P0076628 C130060K24Rik protein_coding protein_coding MGP_WSBEiJ_T0075997.1 MGP_WSBEiJ_G0029831.1 mouse_genomes_project 6 40454220 40455272 - MGP_WSBEiJ_P0075997 Olfr456 protein_coding protein_coding MGP_WSBEiJ_T0076419.1 MGP_WSBEiJ_G0029939.1 mouse_genomes_project 6 53424731 53504883 + MGP_WSBEiJ_P0076419 Znrf2 protein_coding protein_coding MGP_WSBEiJ_T0076420.1 MGP_WSBEiJ_G0029939.1 mouse_genomes_project 6 53425085 53489837 + MGP_WSBEiJ_P0076420 Znrf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076421.1 MGP_WSBEiJ_G0029939.1 mouse_genomes_project 6 53425263 53496491 + MGP_WSBEiJ_P0076421 Znrf2 protein_coding protein_coding MGP_WSBEiJ_T0079230.1 MGP_WSBEiJ_G0030534.1 mouse_genomes_project 6 134456087 134460580 + MGP_WSBEiJ_P0079230 protein_coding protein_coding MGP_WSBEiJ_T0008494.1 MGP_WSBEiJ_G0006873.1 mouse_genomes_project 6 71343794 71350727 + Gm44172 lincRNA lincRNA MGP_WSBEiJ_T0015002.1 MGP_WSBEiJ_G0013132.1 mouse_genomes_project 6 85575105 85575649 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002099.1 MGP_WSBEiJ_G0002018.1 mouse_genomes_project 6 129572866 129573236 - TEC TEC MGP_WSBEiJ_T0100922.1 MGP_WSBEiJ_G0039380.1 mouse_genomes_project 6 90454257 90455056 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000201.1 MGP_WSBEiJ_G0000151.1 mouse_genomes_project 6 70105510 70384977 + MGP_WSBEiJ_P0000201 IG_V_gene IG_V_gene MGP_WSBEiJ_T0076231.1 MGP_WSBEiJ_G0029897.1 mouse_genomes_project 6 47526560 47546613 - MGP_WSBEiJ_P0076231 Tra2a protein_coding protein_coding MGP_WSBEiJ_T0076232.1 MGP_WSBEiJ_G0029897.1 mouse_genomes_project 6 47526560 47546614 - MGP_WSBEiJ_P0076232 Tra2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076233.1 MGP_WSBEiJ_G0029897.1 mouse_genomes_project 6 47526564 47546636 - Tra2a protein_coding retained_intron MGP_WSBEiJ_T0076234.1 MGP_WSBEiJ_G0029897.1 mouse_genomes_project 6 47526564 47546633 - MGP_WSBEiJ_P0076234 Tra2a protein_coding protein_coding MGP_WSBEiJ_T0076235.1 MGP_WSBEiJ_G0029897.1 mouse_genomes_project 6 47542845 47546633 - Tra2a protein_coding retained_intron MGP_WSBEiJ_T0002131.1 MGP_WSBEiJ_G0002050.1 mouse_genomes_project 6 147677520 147679646 - TEC TEC MGP_WSBEiJ_T0017670.1 MGP_WSBEiJ_G0015052.1 mouse_genomes_project 6 52534705 52576154 + 4921529L05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017671.1 MGP_WSBEiJ_G0015052.1 mouse_genomes_project 6 52534715 52537817 + 4921529L05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017672.1 MGP_WSBEiJ_G0015052.1 mouse_genomes_project 6 52534743 52568137 + 4921529L05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017673.1 MGP_WSBEiJ_G0015052.1 mouse_genomes_project 6 52568062 52576797 + 4921529L05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0078196.1 MGP_WSBEiJ_G0030316.1 mouse_genomes_project 6 116524354 116674466 + Syn2 protein_coding retained_intron MGP_WSBEiJ_T0078197.1 MGP_WSBEiJ_G0030316.1 mouse_genomes_project 6 116524354 116675934 + MGP_WSBEiJ_P0078197 Syn2 protein_coding protein_coding MGP_WSBEiJ_T0078198.1 MGP_WSBEiJ_G0030316.1 mouse_genomes_project 6 116524369 116681373 + MGP_WSBEiJ_P0078198 Syn2 protein_coding protein_coding MGP_WSBEiJ_T0078199.1 MGP_WSBEiJ_G0030316.1 mouse_genomes_project 6 116524402 116675934 + MGP_WSBEiJ_P0078199 Syn2 protein_coding protein_coding MGP_WSBEiJ_T0078200.1 MGP_WSBEiJ_G0030316.1 mouse_genomes_project 6 116609253 116640182 + Syn2 protein_coding processed_transcript MGP_WSBEiJ_T0078202.1 MGP_WSBEiJ_G0030316.1 mouse_genomes_project 6 116634353 116675934 + Syn2 protein_coding processed_transcript MGP_WSBEiJ_T0078205.1 MGP_WSBEiJ_G0030316.1 mouse_genomes_project 6 116648988 116678086 + Syn2 protein_coding retained_intron MGP_WSBEiJ_T0078661.1 MGP_WSBEiJ_G0030400.1 mouse_genomes_project 6 124519894 124523710 + MGP_WSBEiJ_P0078661 Dppa3 protein_coding protein_coding MGP_WSBEiJ_T0078662.1 MGP_WSBEiJ_G0030400.1 mouse_genomes_project 6 124520200 124523710 + MGP_WSBEiJ_P0078662 Dppa3 protein_coding protein_coding MGP_WSBEiJ_T0099679.1 MGP_WSBEiJ_G0038342.1 mouse_genomes_project 6 119648497 119648629 - Gm23908 snoRNA snoRNA MGP_WSBEiJ_T0002108.1 MGP_WSBEiJ_G0002027.1 mouse_genomes_project 6 132092352 132095023 + TEC TEC MGP_WSBEiJ_T0008431.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33793576 33974712 - lincRNA lincRNA MGP_WSBEiJ_T0008432.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33795943 33859233 - lincRNA lincRNA MGP_WSBEiJ_T0008433.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33852088 33974953 - lincRNA lincRNA MGP_WSBEiJ_T0008434.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33924338 33975095 - lincRNA lincRNA MGP_WSBEiJ_T0008435.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33974238 33975149 - lincRNA lincRNA MGP_WSBEiJ_T0008436.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33974240 33977053 - lincRNA lincRNA MGP_WSBEiJ_T0008437.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33974247 33975778 - lincRNA lincRNA MGP_WSBEiJ_T0008438.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33974526 33976288 - lincRNA lincRNA MGP_WSBEiJ_T0008439.1 MGP_WSBEiJ_G0006828.1 mouse_genomes_project 6 33974600 33975919 - lincRNA lincRNA MGP_WSBEiJ_T0077625.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91469939 91532583 - MGP_WSBEiJ_P0077625 Iqsec1 protein_coding protein_coding MGP_WSBEiJ_T0077626.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91473453 91477170 - Iqsec1 protein_coding retained_intron MGP_WSBEiJ_T0077627.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91473453 91628831 - MGP_WSBEiJ_P0077627 Iqsec1 protein_coding protein_coding MGP_WSBEiJ_T0077628.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91477509 91483524 - Iqsec1 protein_coding processed_transcript MGP_WSBEiJ_T0077629.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91477693 91482872 - Iqsec1 protein_coding processed_transcript MGP_WSBEiJ_T0077630.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91506026 91510914 - Iqsec1 protein_coding processed_transcript MGP_WSBEiJ_T0077631.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91506740 91581290 - MGP_WSBEiJ_P0077631 Iqsec1 protein_coding protein_coding MGP_WSBEiJ_T0077632.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91506870 91553832 - Iqsec1 protein_coding processed_transcript MGP_WSBEiJ_T0077633.1 MGP_WSBEiJ_G0030212.1 mouse_genomes_project 6 91510816 91574701 - Iqsec1 protein_coding processed_transcript MGP_WSBEiJ_T0098415.1 MGP_WSBEiJ_G0037078.1 mouse_genomes_project 6 40742772 40742880 - Gm22363 snRNA snRNA MGP_WSBEiJ_T0078116.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115113280 115174313 + MGP_WSBEiJ_P0078116 Irak2 protein_coding protein_coding MGP_WSBEiJ_T0078117.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115113301 115171901 + MGP_WSBEiJ_P0078117 Irak2 protein_coding protein_coding MGP_WSBEiJ_T0078118.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115113314 115140607 + Irak2 protein_coding retained_intron MGP_WSBEiJ_T0078119.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115113341 115174296 + MGP_WSBEiJ_P0078119 Irak2 protein_coding protein_coding MGP_WSBEiJ_T0078120.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115113349 115147633 + MGP_WSBEiJ_P0078120 Irak2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078121.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115143447 115147539 + Irak2 protein_coding processed_transcript MGP_WSBEiJ_T0078122.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115144375 115171901 + Irak2 protein_coding retained_intron MGP_WSBEiJ_T0078123.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115167999 115172016 + Irak2 protein_coding retained_intron MGP_WSBEiJ_T0078124.1 MGP_WSBEiJ_G0030305.1 mouse_genomes_project 6 115170856 115172111 + Irak2 protein_coding processed_transcript MGP_WSBEiJ_T0002047.1 MGP_WSBEiJ_G0001967.1 mouse_genomes_project 6 93998888 94000348 + TEC TEC MGP_WSBEiJ_T0075861.1 MGP_WSBEiJ_G0029778.1 mouse_genomes_project 6 37686416 38084776 + MGP_WSBEiJ_P0075861 Tmem178b protein_coding protein_coding MGP_WSBEiJ_T0075862.1 MGP_WSBEiJ_G0029778.1 mouse_genomes_project 6 37933410 38078138 + MGP_WSBEiJ_P0075862 Tmem178b protein_coding protein_coding MGP_WSBEiJ_T0075863.1 MGP_WSBEiJ_G0029778.1 mouse_genomes_project 6 38078601 38084851 + Tmem178b protein_coding retained_intron MGP_WSBEiJ_T0014880.1 MGP_WSBEiJ_G0013010.1 mouse_genomes_project 6 47345112 47345421 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077083.1 MGP_WSBEiJ_G0030100.1 mouse_genomes_project 6 83750458 83836385 - MGP_WSBEiJ_P0077083 Tet3 protein_coding protein_coding MGP_WSBEiJ_T0077084.1 MGP_WSBEiJ_G0030100.1 mouse_genomes_project 6 83755597 83851151 - MGP_WSBEiJ_P0077084 Tet3 protein_coding protein_coding MGP_WSBEiJ_T0077085.1 MGP_WSBEiJ_G0030100.1 mouse_genomes_project 6 83787522 83836454 - Tet3 protein_coding processed_transcript MGP_WSBEiJ_T0077086.1 MGP_WSBEiJ_G0030100.1 mouse_genomes_project 6 83793511 83853836 - MGP_WSBEiJ_P0077086 Tet3 protein_coding protein_coding MGP_WSBEiJ_T0077087.1 MGP_WSBEiJ_G0030100.1 mouse_genomes_project 6 83831571 83836408 - Tet3 protein_coding retained_intron MGP_WSBEiJ_T0075332.1 MGP_WSBEiJ_G0029684.1 mouse_genomes_project 6 25739475 25748367 - MGP_WSBEiJ_P0075332 Pax4 protein_coding protein_coding MGP_WSBEiJ_T0075333.1 MGP_WSBEiJ_G0029684.1 mouse_genomes_project 6 25739475 25748469 - MGP_WSBEiJ_P0075333 Pax4 protein_coding protein_coding MGP_WSBEiJ_T0075334.1 MGP_WSBEiJ_G0029684.1 mouse_genomes_project 6 25739480 25748367 - MGP_WSBEiJ_P0075334 Pax4 protein_coding protein_coding MGP_WSBEiJ_T0075335.1 MGP_WSBEiJ_G0029684.1 mouse_genomes_project 6 25739516 25746302 - MGP_WSBEiJ_P0075335 Pax4 protein_coding protein_coding MGP_WSBEiJ_T0075336.1 MGP_WSBEiJ_G0029684.1 mouse_genomes_project 6 25740785 25745499 - Pax4 protein_coding retained_intron MGP_WSBEiJ_T0075337.1 MGP_WSBEiJ_G0029684.1 mouse_genomes_project 6 25741772 25746302 - Pax4 protein_coding retained_intron MGP_WSBEiJ_T0015113.1 MGP_WSBEiJ_G0013243.1 mouse_genomes_project 6 124540987 124541428 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011470.1 MGP_WSBEiJ_G0009627.1 mouse_genomes_project 6 130134156 130134455 + Gm23098 misc_RNA misc_RNA MGP_WSBEiJ_T0075716.1 MGP_WSBEiJ_G0029744.1 mouse_genomes_project 6 32868629 32910915 - MGP_WSBEiJ_P0075716 Slc13a4 protein_coding protein_coding MGP_WSBEiJ_T0075717.1 MGP_WSBEiJ_G0029744.1 mouse_genomes_project 6 32880803 32888776 - Slc13a4 protein_coding retained_intron MGP_WSBEiJ_T0075718.1 MGP_WSBEiJ_G0029744.1 mouse_genomes_project 6 32887203 32910913 - Slc13a4 protein_coding retained_intron MGP_WSBEiJ_T0014965.1 MGP_WSBEiJ_G0013095.1 mouse_genomes_project 6 67959976 67961504 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077288.1 MGP_WSBEiJ_G0030141.1 mouse_genomes_project 6 87002851 87007264 + MGP_WSBEiJ_P0077288 Fam136a protein_coding protein_coding MGP_WSBEiJ_T0077289.1 MGP_WSBEiJ_G0030141.1 mouse_genomes_project 6 87002919 87004225 + Fam136a protein_coding retained_intron MGP_WSBEiJ_T0077290.1 MGP_WSBEiJ_G0030141.1 mouse_genomes_project 6 87002929 87006004 + MGP_WSBEiJ_P0077290 Fam136a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077217.1 MGP_WSBEiJ_G0030123.1 mouse_genomes_project 6 85976650 85982696 - Pradc1 protein_coding retained_intron MGP_WSBEiJ_T0077218.1 MGP_WSBEiJ_G0030123.1 mouse_genomes_project 6 85976651 85982740 - MGP_WSBEiJ_P0077218 Pradc1 protein_coding protein_coding MGP_WSBEiJ_T0077219.1 MGP_WSBEiJ_G0030123.1 mouse_genomes_project 6 85976793 85982674 - MGP_WSBEiJ_P0077219 Pradc1 protein_coding protein_coding MGP_WSBEiJ_T0077220.1 MGP_WSBEiJ_G0030123.1 mouse_genomes_project 6 85976824 85983436 - Pradc1 protein_coding processed_transcript MGP_WSBEiJ_T0077221.1 MGP_WSBEiJ_G0030123.1 mouse_genomes_project 6 85977149 85982716 - Pradc1 protein_coding processed_transcript MGP_WSBEiJ_T0077222.1 MGP_WSBEiJ_G0030123.1 mouse_genomes_project 6 85977164 85982748 - Pradc1 protein_coding retained_intron MGP_WSBEiJ_T0077223.1 MGP_WSBEiJ_G0030123.1 mouse_genomes_project 6 85977296 85982705 - Pradc1 protein_coding processed_transcript MGP_WSBEiJ_T0077594.1 MGP_WSBEiJ_G0030204.1 mouse_genomes_project 6 91113756 91117983 + MGP_WSBEiJ_P0077594 BC048671 protein_coding protein_coding MGP_WSBEiJ_T0077595.1 MGP_WSBEiJ_G0030204.1 mouse_genomes_project 6 91114653 91117983 + MGP_WSBEiJ_P0077595 BC048671 protein_coding protein_coding MGP_WSBEiJ_T0076190.1 MGP_WSBEiJ_G0029887.1 mouse_genomes_project 6 47025893 47032320 - MGP_WSBEiJ_P0076190 Gimap3 protein_coding protein_coding MGP_WSBEiJ_T0076191.1 MGP_WSBEiJ_G0029887.1 mouse_genomes_project 6 47025895 47028389 - MGP_WSBEiJ_P0076191 Gimap3 protein_coding protein_coding MGP_WSBEiJ_T0100901.1 MGP_WSBEiJ_G0039359.1 mouse_genomes_project 6 56060382 56061268 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005552.1 MGP_WSBEiJ_G0004671.1 mouse_genomes_project 6 117109846 117111658 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0005553.1 MGP_WSBEiJ_G0004671.1 mouse_genomes_project 6 117109873 117111015 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0005048.1 MGP_WSBEiJ_G0004306.1 mouse_genomes_project 6 149760125 149766001 - Sspnos antisense antisense MGP_WSBEiJ_T0002141.1 MGP_WSBEiJ_G0002060.1 mouse_genomes_project 6 152039752 152043231 + TEC TEC MGP_WSBEiJ_T0008355.1 MGP_WSBEiJ_G0006779.1 mouse_genomes_project 6 741898 758537 - Gm43986 lincRNA lincRNA MGP_WSBEiJ_T0079149.1 MGP_WSBEiJ_G0030510.1 mouse_genomes_project 6 131815267 131823469 - MGP_WSBEiJ_P0079149 Cd69 protein_coding protein_coding MGP_WSBEiJ_T0079150.1 MGP_WSBEiJ_G0030510.1 mouse_genomes_project 6 131816201 131823399 - MGP_WSBEiJ_P0079150 Cd69 protein_coding protein_coding MGP_WSBEiJ_T0079151.1 MGP_WSBEiJ_G0030510.1 mouse_genomes_project 6 131817404 131823402 - Cd69 protein_coding retained_intron MGP_WSBEiJ_T0079152.1 MGP_WSBEiJ_G0030510.1 mouse_genomes_project 6 131818422 131823402 - Cd69 protein_coding retained_intron MGP_WSBEiJ_T0079153.1 MGP_WSBEiJ_G0030510.1 mouse_genomes_project 6 131819192 131823402 - Cd69 protein_coding retained_intron MGP_WSBEiJ_T0005000.1 MGP_WSBEiJ_G0004265.1 mouse_genomes_project 6 126814097 126817361 - Gm15884 antisense antisense MGP_WSBEiJ_T0010611.1 MGP_WSBEiJ_G0008768.1 mouse_genomes_project 6 88823138 88823269 - Mir6376 miRNA miRNA MGP_WSBEiJ_T0075945.1 MGP_WSBEiJ_G0029814.1 mouse_genomes_project 6 39858142 39867850 + MGP_WSBEiJ_P0075945 Sval1 protein_coding protein_coding MGP_WSBEiJ_T0014802.1 MGP_WSBEiJ_G0012932.1 mouse_genomes_project 6 10308552 10309048 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015123.1 MGP_WSBEiJ_G0013253.1 mouse_genomes_project 6 127907698 127908088 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079301.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138130345 138160615 - MGP_WSBEiJ_P0079301 Gpr19 protein_coding protein_coding MGP_WSBEiJ_T0079302.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138130345 138160505 - MGP_WSBEiJ_P0079302 Gpr19 protein_coding protein_coding MGP_WSBEiJ_T0079303.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138130360 138160548 - MGP_WSBEiJ_P0079303 Gpr19 protein_coding protein_coding MGP_WSBEiJ_T0079304.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138130409 138149367 - MGP_WSBEiJ_P0079304 Gpr19 protein_coding protein_coding MGP_WSBEiJ_T0079305.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138130414 138160553 - MGP_WSBEiJ_P0079305 Gpr19 protein_coding protein_coding MGP_WSBEiJ_T0079306.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138131289 138160515 - MGP_WSBEiJ_P0079306 Gpr19 protein_coding protein_coding MGP_WSBEiJ_T0079307.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138131460 138160505 - MGP_WSBEiJ_P0079307 Gpr19 protein_coding protein_coding MGP_WSBEiJ_T0079308.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138131501 138149303 - MGP_WSBEiJ_P0079308 Gpr19 protein_coding protein_coding MGP_WSBEiJ_T0079309.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138138672 138160577 - Gpr19 protein_coding processed_transcript MGP_WSBEiJ_T0079310.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138148425 138159777 - Gpr19 protein_coding processed_transcript MGP_WSBEiJ_T0079311.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138149185 138161254 - Gpr19 protein_coding processed_transcript MGP_WSBEiJ_T0079312.1 MGP_WSBEiJ_G0030573.1 mouse_genomes_project 6 138159390 138160615 - Gpr19 protein_coding processed_transcript MGP_WSBEiJ_T0011424.1 MGP_WSBEiJ_G0009581.1 mouse_genomes_project 6 14667222 14667354 + Gm27755 misc_RNA misc_RNA MGP_WSBEiJ_T0077740.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94621484 95257567 - MGP_WSBEiJ_P0077740 Magi1 protein_coding protein_coding MGP_WSBEiJ_T0077741.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94621484 95256972 - MGP_WSBEiJ_P0077741 Magi1 protein_coding protein_coding MGP_WSBEiJ_T0077742.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94621484 95256972 - MGP_WSBEiJ_P0077742 Magi1 protein_coding protein_coding MGP_WSBEiJ_T0077743.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94624065 94868665 - MGP_WSBEiJ_P0077743 Magi1 protein_coding protein_coding MGP_WSBEiJ_T0077744.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94624385 94900439 - MGP_WSBEiJ_P0077744 Magi1 protein_coding protein_coding MGP_WSBEiJ_T0077745.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94628104 94867937 - MGP_WSBEiJ_P0077745 Magi1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077746.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94629053 95257545 - MGP_WSBEiJ_P0077746 Magi1 protein_coding protein_coding MGP_WSBEiJ_T0077747.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94724654 94867479 - MGP_WSBEiJ_P0077747 Magi1 protein_coding protein_coding MGP_WSBEiJ_T0077748.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 94736122 94743357 - MGP_WSBEiJ_P0077748 Magi1 protein_coding protein_coding MGP_WSBEiJ_T0077749.1 MGP_WSBEiJ_G0030234.1 mouse_genomes_project 6 95100378 95256675 - Magi1 protein_coding processed_transcript MGP_WSBEiJ_T0076337.1 MGP_WSBEiJ_G0029923.1 mouse_genomes_project 6 50729190 50732892 - MGP_WSBEiJ_P0076337 Hoxa11 protein_coding protein_coding MGP_WSBEiJ_T0076338.1 MGP_WSBEiJ_G0029923.1 mouse_genomes_project 6 50729194 50732877 - Hoxa11 protein_coding processed_transcript MGP_WSBEiJ_T0077101.1 MGP_WSBEiJ_G0030103.1 mouse_genomes_project 6 83938287 83966886 - Stambp protein_coding retained_intron MGP_WSBEiJ_T0077102.1 MGP_WSBEiJ_G0030103.1 mouse_genomes_project 6 83938293 83966892 - MGP_WSBEiJ_P0077102 Stambp protein_coding protein_coding MGP_WSBEiJ_T0077103.1 MGP_WSBEiJ_G0030103.1 mouse_genomes_project 6 83938300 83967197 - MGP_WSBEiJ_P0077103 Stambp protein_coding protein_coding MGP_WSBEiJ_T0077104.1 MGP_WSBEiJ_G0030103.1 mouse_genomes_project 6 83938430 83945562 - Stambp protein_coding retained_intron MGP_WSBEiJ_T0077105.1 MGP_WSBEiJ_G0030103.1 mouse_genomes_project 6 83938835 83966876 - MGP_WSBEiJ_P0077105 Stambp protein_coding protein_coding MGP_WSBEiJ_T0077106.1 MGP_WSBEiJ_G0030103.1 mouse_genomes_project 6 83944986 83945390 - Stambp protein_coding retained_intron MGP_WSBEiJ_T0077107.1 MGP_WSBEiJ_G0030103.1 mouse_genomes_project 6 83965591 83966898 - Stambp protein_coding retained_intron MGP_WSBEiJ_T0002678.1 MGP_WSBEiJ_G0002562.1 mouse_genomes_project 6 39133993 39134257 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0076704.1 MGP_WSBEiJ_G0030024.1 mouse_genomes_project 6 71069528 71074735 + MGP_WSBEiJ_P0076704 Fabp1 protein_coding protein_coding MGP_WSBEiJ_T0011421.1 MGP_WSBEiJ_G0009578.1 mouse_genomes_project 6 3683688 3683834 - Dlx6os1 misc_RNA misc_RNA MGP_WSBEiJ_T0017716.1 MGP_WSBEiJ_G0015070.1 mouse_genomes_project 6 127646315 127660723 + Gm26728 processed_transcript antisense MGP_WSBEiJ_T0017717.1 MGP_WSBEiJ_G0015070.1 mouse_genomes_project 6 127646319 127647861 + Gm26728 processed_transcript retained_intron MGP_WSBEiJ_T0017718.1 MGP_WSBEiJ_G0015070.1 mouse_genomes_project 6 127646321 127651558 + Gm26728 processed_transcript antisense MGP_WSBEiJ_T0075587.1 MGP_WSBEiJ_G0029724.1 mouse_genomes_project 6 29516868 29526076 + 1700012A03Rik protein_coding processed_transcript MGP_WSBEiJ_T0075588.1 MGP_WSBEiJ_G0029724.1 mouse_genomes_project 6 29516890 29526076 + 1700012A03Rik protein_coding processed_transcript MGP_WSBEiJ_T0075589.1 MGP_WSBEiJ_G0029724.1 mouse_genomes_project 6 29516907 29526070 + MGP_WSBEiJ_P0075589 1700012A03Rik protein_coding protein_coding MGP_WSBEiJ_T0075590.1 MGP_WSBEiJ_G0029724.1 mouse_genomes_project 6 29525295 29525776 + 1700012A03Rik protein_coding processed_transcript MGP_WSBEiJ_T0099687.1 MGP_WSBEiJ_G0038350.1 mouse_genomes_project 6 126162469 126162579 + Gm23554 snoRNA snoRNA MGP_WSBEiJ_T0100905.1 MGP_WSBEiJ_G0039363.1 mouse_genomes_project 6 56939599 56939903 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0075081.1 MGP_WSBEiJ_G0029632.1 mouse_genomes_project 6 9996863 10077157 - MGP_WSBEiJ_P0075081 protein_coding protein_coding MGP_WSBEiJ_T0075082.1 MGP_WSBEiJ_G0029632.1 mouse_genomes_project 6 10018082 10020752 - protein_coding retained_intron MGP_WSBEiJ_T0075083.1 MGP_WSBEiJ_G0029632.1 mouse_genomes_project 6 10030041 10077157 - MGP_WSBEiJ_P0075083 protein_coding protein_coding MGP_WSBEiJ_T0075084.1 MGP_WSBEiJ_G0029632.1 mouse_genomes_project 6 10042639 10060384 - protein_coding retained_intron MGP_WSBEiJ_T0076998.1 MGP_WSBEiJ_G0030083.1 mouse_genomes_project 6 83440477 83442379 - MGP_WSBEiJ_P0076998 Tlx2 protein_coding protein_coding MGP_WSBEiJ_T0076999.1 MGP_WSBEiJ_G0030083.1 mouse_genomes_project 6 83440744 83442447 - MGP_WSBEiJ_P0076999 Tlx2 protein_coding protein_coding MGP_WSBEiJ_T0079682.1 MGP_WSBEiJ_G0030645.1 mouse_genomes_project 6 149141942 149401149 - MGP_WSBEiJ_P0079682 Lmntd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079683.1 MGP_WSBEiJ_G0030645.1 mouse_genomes_project 6 149171235 149210289 - MGP_WSBEiJ_P0079683 Lmntd1 protein_coding protein_coding MGP_WSBEiJ_T0079684.1 MGP_WSBEiJ_G0030645.1 mouse_genomes_project 6 149206256 149210341 - MGP_WSBEiJ_P0079684 Lmntd1 protein_coding protein_coding MGP_WSBEiJ_T0079685.1 MGP_WSBEiJ_G0030645.1 mouse_genomes_project 6 149326930 149401195 - Lmntd1 protein_coding processed_transcript MGP_WSBEiJ_T0079686.1 MGP_WSBEiJ_G0030645.1 mouse_genomes_project 6 149368040 149400845 - Lmntd1 protein_coding processed_transcript MGP_WSBEiJ_T0077523.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89583565 89584728 - Podxl2 protein_coding processed_transcript MGP_WSBEiJ_T0077524.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89583774 89617321 - MGP_WSBEiJ_P0077524 Podxl2 protein_coding protein_coding MGP_WSBEiJ_T0077525.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89584545 89586928 - Podxl2 protein_coding retained_intron MGP_WSBEiJ_T0077526.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89585183 89590379 - Podxl2 protein_coding processed_transcript MGP_WSBEiJ_T0077527.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89587969 89589845 - Podxl2 protein_coding retained_intron MGP_WSBEiJ_T0077528.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89590680 89617080 - MGP_WSBEiJ_P0077528 Podxl2 protein_coding protein_coding MGP_WSBEiJ_T0077529.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89590680 89617138 - MGP_WSBEiJ_P0077529 Podxl2 protein_coding protein_coding MGP_WSBEiJ_T0077530.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89590815 89606016 - Podxl2 protein_coding processed_transcript MGP_WSBEiJ_T0077531.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89605030 89617331 - Podxl2 protein_coding retained_intron MGP_WSBEiJ_T0077532.1 MGP_WSBEiJ_G0030184.1 mouse_genomes_project 6 89605560 89616719 - Podxl2 protein_coding retained_intron MGP_WSBEiJ_T0004945.1 MGP_WSBEiJ_G0004225.1 mouse_genomes_project 6 88947796 88950873 - 1700031F10Rik antisense antisense MGP_WSBEiJ_T0004946.1 MGP_WSBEiJ_G0004225.1 mouse_genomes_project 6 88947798 88948834 - 1700031F10Rik antisense antisense MGP_WSBEiJ_T0075282.1 MGP_WSBEiJ_G0029669.1 mouse_genomes_project 6 21737244 21786693 + MGP_WSBEiJ_P0075282 Asb15 protein_coding protein_coding MGP_WSBEiJ_T0075283.1 MGP_WSBEiJ_G0029669.1 mouse_genomes_project 6 21770476 21789343 + MGP_WSBEiJ_P0075283 Asb15 protein_coding protein_coding MGP_WSBEiJ_T0076608.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64343515 64360021 + MGP_WSBEiJ_P0076608 Smarcad1 protein_coding protein_coding MGP_WSBEiJ_T0076609.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64343541 64419745 + MGP_WSBEiJ_P0076609 Smarcad1 protein_coding protein_coding MGP_WSBEiJ_T0076610.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64343553 64344494 + Smarcad1 protein_coding retained_intron MGP_WSBEiJ_T0076611.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64343599 64345064 + MGP_WSBEiJ_P0076611 Smarcad1 protein_coding protein_coding MGP_WSBEiJ_T0076612.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64343768 64345136 + MGP_WSBEiJ_P0076612 Smarcad1 protein_coding protein_coding MGP_WSBEiJ_T0076613.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64343790 64356293 + MGP_WSBEiJ_P0076613 Smarcad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076614.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64343798 64356382 + MGP_WSBEiJ_P0076614 Smarcad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076615.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64343811 64386060 + Smarcad1 protein_coding processed_transcript MGP_WSBEiJ_T0076616.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64344145 64419282 + MGP_WSBEiJ_P0076616 Smarcad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076617.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64356415 64372214 + Smarcad1 protein_coding retained_intron MGP_WSBEiJ_T0076618.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64361196 64379645 + Smarcad1 protein_coding processed_transcript MGP_WSBEiJ_T0076619.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64379810 64399618 + MGP_WSBEiJ_P0076619 Smarcad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076620.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64382178 64384936 + Smarcad1 protein_coding retained_intron MGP_WSBEiJ_T0076621.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64401093 64401736 + Smarcad1 protein_coding retained_intron MGP_WSBEiJ_T0076622.1 MGP_WSBEiJ_G0030001.1 mouse_genomes_project 6 64407459 64413663 + Smarcad1 protein_coding retained_intron MGP_WSBEiJ_T0001973.1 MGP_WSBEiJ_G0001893.1 mouse_genomes_project 6 72657733 72659024 + TEC TEC MGP_WSBEiJ_T0077706.1 MGP_WSBEiJ_G0030225.1 mouse_genomes_project 6 92857313 92957034 + MGP_WSBEiJ_P0077706 Fgd5 protein_coding protein_coding MGP_WSBEiJ_T0077707.1 MGP_WSBEiJ_G0030225.1 mouse_genomes_project 6 92948456 92957031 + Fgd5 protein_coding retained_intron MGP_WSBEiJ_T0077708.1 MGP_WSBEiJ_G0030225.1 mouse_genomes_project 6 92952215 92955243 + Fgd5 protein_coding retained_intron MGP_WSBEiJ_T0001901.1 MGP_WSBEiJ_G0001821.1 mouse_genomes_project 6 27291896 27295505 - TEC TEC MGP_WSBEiJ_T0078771.1 MGP_WSBEiJ_G0030430.1 mouse_genomes_project 6 126839979 126841488 - Grcc10 protein_coding processed_transcript MGP_WSBEiJ_T0078772.1 MGP_WSBEiJ_G0030430.1 mouse_genomes_project 6 126839979 126842167 - MGP_WSBEiJ_P0078772 Grcc10 protein_coding protein_coding MGP_WSBEiJ_T0078773.1 MGP_WSBEiJ_G0030430.1 mouse_genomes_project 6 126839982 126841858 - Grcc10 protein_coding retained_intron MGP_WSBEiJ_T0078774.1 MGP_WSBEiJ_G0030430.1 mouse_genomes_project 6 126839983 126841508 - Grcc10 protein_coding retained_intron MGP_WSBEiJ_T0014942.1 MGP_WSBEiJ_G0013072.1 mouse_genomes_project 6 65720425 65720591 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014924.1 MGP_WSBEiJ_G0013054.1 mouse_genomes_project 6 63394262 63394427 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004874.1 MGP_WSBEiJ_G0004181.1 mouse_genomes_project 6 50655631 50656781 + Gm15050 antisense antisense MGP_WSBEiJ_T0008550.1 MGP_WSBEiJ_G0006915.1 mouse_genomes_project 6 101162780 101190174 - Gm44290 lincRNA lincRNA MGP_WSBEiJ_T0078592.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123057591 123079749 + MGP_WSBEiJ_P0078592 Slc6a12 protein_coding protein_coding MGP_WSBEiJ_T0078593.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123057914 123062121 + MGP_WSBEiJ_P0078593 Slc6a12 protein_coding protein_coding MGP_WSBEiJ_T0078594.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123061131 123080152 + MGP_WSBEiJ_P0078594 Slc6a12 protein_coding protein_coding MGP_WSBEiJ_T0078595.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123061932 123069841 + MGP_WSBEiJ_P0078595 Slc6a12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078596.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123061932 123079749 + MGP_WSBEiJ_P0078596 Slc6a12 protein_coding protein_coding MGP_WSBEiJ_T0078597.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123071333 123076445 + Slc6a12 protein_coding retained_intron MGP_WSBEiJ_T0078598.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123071346 123077892 + Slc6a12 protein_coding retained_intron MGP_WSBEiJ_T0078599.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123071431 123079749 + MGP_WSBEiJ_P0078599 Slc6a12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078600.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123071431 123079749 + MGP_WSBEiJ_P0078600 Slc6a12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078601.1 MGP_WSBEiJ_G0030387.1 mouse_genomes_project 6 123073477 123078422 + Slc6a12 protein_coding retained_intron MGP_WSBEiJ_T0078689.1 MGP_WSBEiJ_G0030410.1 mouse_genomes_project 6 125062802 125095094 + MGP_WSBEiJ_P0078689 Clec4b2 protein_coding protein_coding MGP_WSBEiJ_T0077406.1 MGP_WSBEiJ_G0030163.1 mouse_genomes_project 6 88276538 88288716 - MGP_WSBEiJ_P0077406 Prokr1 protein_coding protein_coding MGP_WSBEiJ_T0077407.1 MGP_WSBEiJ_G0030163.1 mouse_genomes_project 6 88276539 88288693 - MGP_WSBEiJ_P0077407 Prokr1 protein_coding protein_coding MGP_WSBEiJ_T0077408.1 MGP_WSBEiJ_G0030163.1 mouse_genomes_project 6 88286345 88288692 - MGP_WSBEiJ_P0077408 Prokr1 protein_coding protein_coding MGP_WSBEiJ_T0001911.1 MGP_WSBEiJ_G0001831.1 mouse_genomes_project 6 36869095 36870312 - TEC TEC MGP_WSBEiJ_T0075684.1 MGP_WSBEiJ_G0029739.1 mouse_genomes_project 6 32450203 32494229 - MGP_WSBEiJ_P0075684 Wdr91 protein_coding protein_coding MGP_WSBEiJ_T0075685.1 MGP_WSBEiJ_G0029739.1 mouse_genomes_project 6 32450203 32494229 - MGP_WSBEiJ_P0075685 Wdr91 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075686.1 MGP_WSBEiJ_G0029739.1 mouse_genomes_project 6 32488019 32493948 - MGP_WSBEiJ_P0075686 Wdr91 protein_coding protein_coding MGP_WSBEiJ_T0075687.1 MGP_WSBEiJ_G0029739.1 mouse_genomes_project 6 32490015 32494015 - MGP_WSBEiJ_P0075687 Wdr91 protein_coding protein_coding MGP_WSBEiJ_T0075688.1 MGP_WSBEiJ_G0029739.1 mouse_genomes_project 6 32491647 32493916 - MGP_WSBEiJ_P0075688 Wdr91 protein_coding protein_coding MGP_WSBEiJ_T0075689.1 MGP_WSBEiJ_G0029739.1 mouse_genomes_project 6 32491899 32494186 - Wdr91 protein_coding retained_intron MGP_WSBEiJ_T0075690.1 MGP_WSBEiJ_G0029739.1 mouse_genomes_project 6 32492799 32494189 - Wdr91 protein_coding processed_transcript MGP_WSBEiJ_T0075691.1 MGP_WSBEiJ_G0029739.1 mouse_genomes_project 6 32492813 32494195 - Wdr91 protein_coding processed_transcript MGP_WSBEiJ_T0015182.1 MGP_WSBEiJ_G0013312.1 mouse_genomes_project 6 144656680 144656796 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014877.1 MGP_WSBEiJ_G0013007.1 mouse_genomes_project 6 47236011 47237257 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078398.1 MGP_WSBEiJ_G0030357.1 mouse_genomes_project 6 120007088 120024876 - MGP_WSBEiJ_P0078398 Zfp9 protein_coding protein_coding MGP_WSBEiJ_T0078399.1 MGP_WSBEiJ_G0030357.1 mouse_genomes_project 6 120011893 120013516 - Zfp9 protein_coding retained_intron MGP_WSBEiJ_T0008623.1 MGP_WSBEiJ_G0006973.1 mouse_genomes_project 6 146663179 146663566 + 4930434O05Rik lincRNA lincRNA MGP_WSBEiJ_T0014989.1 MGP_WSBEiJ_G0013119.1 mouse_genomes_project 6 79303827 79304536 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015103.1 MGP_WSBEiJ_G0013233.1 mouse_genomes_project 6 123418951 123419358 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079357.1 MGP_WSBEiJ_G0030585.1 mouse_genomes_project 6 139750730 139765037 - MGP_WSBEiJ_P0079357 E330021D16Rik protein_coding protein_coding MGP_WSBEiJ_T0079358.1 MGP_WSBEiJ_G0030585.1 mouse_genomes_project 6 139751129 139752245 - MGP_WSBEiJ_P0079358 E330021D16Rik protein_coding protein_coding MGP_WSBEiJ_T0079359.1 MGP_WSBEiJ_G0030585.1 mouse_genomes_project 6 139751909 139765032 - MGP_WSBEiJ_P0079359 E330021D16Rik protein_coding protein_coding MGP_WSBEiJ_T0079378.1 MGP_WSBEiJ_G0030589.1 mouse_genomes_project 6 140178640 140180864 - MGP_WSBEiJ_P0079378 Hist4h4 protein_coding protein_coding MGP_WSBEiJ_T0008635.1 MGP_WSBEiJ_G0006981.1 mouse_genomes_project 6 149814469 149816697 - Gm44269 lincRNA lincRNA MGP_WSBEiJ_T0005020.1 MGP_WSBEiJ_G0004281.1 mouse_genomes_project 6 131571612 131572901 - antisense antisense MGP_WSBEiJ_T0014948.1 MGP_WSBEiJ_G0013078.1 mouse_genomes_project 6 66346448 66346743 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078318.1 MGP_WSBEiJ_G0030338.1 mouse_genomes_project 6 117885449 117940077 - MGP_WSBEiJ_P0078318 Alox5 protein_coding protein_coding MGP_WSBEiJ_T0078319.1 MGP_WSBEiJ_G0030338.1 mouse_genomes_project 6 117885646 117940030 - Alox5 protein_coding retained_intron MGP_WSBEiJ_T0078320.1 MGP_WSBEiJ_G0030338.1 mouse_genomes_project 6 117885648 117888158 - Alox5 protein_coding retained_intron MGP_WSBEiJ_T0078321.1 MGP_WSBEiJ_G0030338.1 mouse_genomes_project 6 117885979 117939923 - MGP_WSBEiJ_P0078321 Alox5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078322.1 MGP_WSBEiJ_G0030338.1 mouse_genomes_project 6 117886091 117939923 - MGP_WSBEiJ_P0078322 Alox5 protein_coding protein_coding MGP_WSBEiJ_T0078323.1 MGP_WSBEiJ_G0030338.1 mouse_genomes_project 6 117886091 117939923 - MGP_WSBEiJ_P0078323 Alox5 protein_coding protein_coding MGP_WSBEiJ_T0078324.1 MGP_WSBEiJ_G0030338.1 mouse_genomes_project 6 117887956 117889423 - Alox5 protein_coding retained_intron MGP_WSBEiJ_T0078325.1 MGP_WSBEiJ_G0030338.1 mouse_genomes_project 6 117890867 117901596 - Alox5 protein_coding processed_transcript MGP_WSBEiJ_T0015100.1 MGP_WSBEiJ_G0013230.1 mouse_genomes_project 6 123272433 123272706 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015180.1 MGP_WSBEiJ_G0013310.1 mouse_genomes_project 6 144032092 144032578 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002017.1 MGP_WSBEiJ_G0001937.1 mouse_genomes_project 6 88020493 88022597 - TEC TEC MGP_WSBEiJ_T0008588.1 MGP_WSBEiJ_G0006949.1 mouse_genomes_project 6 128492462 128537683 - Gm10415 lincRNA lincRNA MGP_WSBEiJ_T0077878.1 MGP_WSBEiJ_G0030262.1 mouse_genomes_project 6 104858184 105093973 + MGP_WSBEiJ_P0077878 Chl1 protein_coding protein_coding MGP_WSBEiJ_T0077879.1 MGP_WSBEiJ_G0030262.1 mouse_genomes_project 6 104858560 104992142 + Chl1 protein_coding retained_intron MGP_WSBEiJ_T0077880.1 MGP_WSBEiJ_G0030262.1 mouse_genomes_project 6 104858666 105075602 + MGP_WSBEiJ_P0077880 Chl1 protein_coding protein_coding MGP_WSBEiJ_T0077881.1 MGP_WSBEiJ_G0030262.1 mouse_genomes_project 6 104858772 105071208 + MGP_WSBEiJ_P0077881 Chl1 protein_coding protein_coding MGP_WSBEiJ_T0077882.1 MGP_WSBEiJ_G0030262.1 mouse_genomes_project 6 104858928 105012282 + MGP_WSBEiJ_P0077882 Chl1 protein_coding protein_coding MGP_WSBEiJ_T0077883.1 MGP_WSBEiJ_G0030262.1 mouse_genomes_project 6 105045352 105071565 + MGP_WSBEiJ_P0077883 Chl1 protein_coding protein_coding MGP_WSBEiJ_T0014860.1 MGP_WSBEiJ_G0012990.1 mouse_genomes_project 6 41389388 41391136 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002120.1 MGP_WSBEiJ_G0002039.1 mouse_genomes_project 6 140402680 140403488 + TEC TEC MGP_WSBEiJ_T0074936.1 MGP_WSBEiJ_G0029602.1 mouse_genomes_project 6 1317057 1363505 + MGP_WSBEiJ_P0074936 Casd1 protein_coding protein_coding MGP_WSBEiJ_T0074937.1 MGP_WSBEiJ_G0029602.1 mouse_genomes_project 6 1317167 1342886 + MGP_WSBEiJ_P0074937 Casd1 protein_coding protein_coding MGP_WSBEiJ_T0074938.1 MGP_WSBEiJ_G0029602.1 mouse_genomes_project 6 1317364 1326045 + MGP_WSBEiJ_P0074938 Casd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074939.1 MGP_WSBEiJ_G0029602.1 mouse_genomes_project 6 1317421 1339755 + MGP_WSBEiJ_P0074939 Casd1 protein_coding protein_coding MGP_WSBEiJ_T0074940.1 MGP_WSBEiJ_G0029602.1 mouse_genomes_project 6 1349869 1361123 + MGP_WSBEiJ_P0074940 Casd1 protein_coding protein_coding MGP_WSBEiJ_T0004911.1 MGP_WSBEiJ_G0004208.1 mouse_genomes_project 6 83542858 83550542 - Gm15624 antisense antisense MGP_WSBEiJ_T0004912.1 MGP_WSBEiJ_G0004208.1 mouse_genomes_project 6 83547150 83550564 - Gm15624 antisense antisense MGP_WSBEiJ_T0004913.1 MGP_WSBEiJ_G0004208.1 mouse_genomes_project 6 83547614 83550363 - Gm15624 antisense antisense MGP_WSBEiJ_T0002119.1 MGP_WSBEiJ_G0002038.1 mouse_genomes_project 6 140250428 140250936 - TEC TEC MGP_WSBEiJ_T0079833.1 MGP_WSBEiJ_G0030673.1 mouse_genomes_project 6 152866894 152985660 - MGP_WSBEiJ_P0079833 Dennd5b protein_coding protein_coding MGP_WSBEiJ_T0079834.1 MGP_WSBEiJ_G0030673.1 mouse_genomes_project 6 152894059 152897531 - Dennd5b protein_coding retained_intron MGP_WSBEiJ_T0079835.1 MGP_WSBEiJ_G0030673.1 mouse_genomes_project 6 152894197 152985518 - Dennd5b protein_coding retained_intron MGP_WSBEiJ_T0079836.1 MGP_WSBEiJ_G0030673.1 mouse_genomes_project 6 152918572 152923341 - Dennd5b protein_coding retained_intron MGP_WSBEiJ_T0079837.1 MGP_WSBEiJ_G0030673.1 mouse_genomes_project 6 152952605 152965187 - MGP_WSBEiJ_P0079837 Dennd5b protein_coding protein_coding MGP_WSBEiJ_T0079838.1 MGP_WSBEiJ_G0030673.1 mouse_genomes_project 6 152952628 152985564 - MGP_WSBEiJ_P0079838 Dennd5b protein_coding protein_coding MGP_WSBEiJ_T0079839.1 MGP_WSBEiJ_G0030673.1 mouse_genomes_project 6 152966276 152969287 - Dennd5b protein_coding retained_intron MGP_WSBEiJ_T0075737.1 MGP_WSBEiJ_G0029751.1 mouse_genomes_project 6 35174273 35212222 + MGP_WSBEiJ_P0075737 Akr1d1 protein_coding protein_coding MGP_WSBEiJ_T0075738.1 MGP_WSBEiJ_G0029751.1 mouse_genomes_project 6 35186577 35200896 + Akr1d1 protein_coding processed_transcript MGP_WSBEiJ_T0100128.1 MGP_WSBEiJ_G0038721.1 mouse_genomes_project 6 64602301 64603341 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100129.1 MGP_WSBEiJ_G0038721.1 mouse_genomes_project 6 64602407 64603125 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0076507.1 MGP_WSBEiJ_G0029962.1 mouse_genomes_project 6 55790562 55793787 + MGP_WSBEiJ_P0076507 protein_coding protein_coding MGP_WSBEiJ_T0079061.1 MGP_WSBEiJ_G0030487.1 mouse_genomes_project 6 130570773 130634001 - MGP_WSBEiJ_P0079061 Tead4 protein_coding protein_coding MGP_WSBEiJ_T0079062.1 MGP_WSBEiJ_G0030487.1 mouse_genomes_project 6 130573380 130658932 - MGP_WSBEiJ_P0079062 Tead4 protein_coding protein_coding MGP_WSBEiJ_T0079063.1 MGP_WSBEiJ_G0030487.1 mouse_genomes_project 6 130574418 130658932 - MGP_WSBEiJ_P0079063 Tead4 protein_coding protein_coding MGP_WSBEiJ_T0079064.1 MGP_WSBEiJ_G0030487.1 mouse_genomes_project 6 130627727 130658942 - MGP_WSBEiJ_P0079064 Tead4 protein_coding protein_coding MGP_WSBEiJ_T0079065.1 MGP_WSBEiJ_G0030487.1 mouse_genomes_project 6 130627777 130658857 - MGP_WSBEiJ_P0079065 Tead4 protein_coding protein_coding MGP_WSBEiJ_T0078093.1 MGP_WSBEiJ_G0030299.1 mouse_genomes_project 6 114954814 114963103 - MGP_WSBEiJ_P0078093 Prrt3 protein_coding protein_coding MGP_WSBEiJ_T0078094.1 MGP_WSBEiJ_G0030299.1 mouse_genomes_project 6 114955100 114963151 - MGP_WSBEiJ_P0078094 Prrt3 protein_coding protein_coding MGP_WSBEiJ_T0078095.1 MGP_WSBEiJ_G0030299.1 mouse_genomes_project 6 114955270 114963038 - MGP_WSBEiJ_P0078095 Prrt3 protein_coding protein_coding MGP_WSBEiJ_T0078096.1 MGP_WSBEiJ_G0030299.1 mouse_genomes_project 6 114957443 114963107 - MGP_WSBEiJ_P0078096 Prrt3 protein_coding protein_coding MGP_WSBEiJ_T0078097.1 MGP_WSBEiJ_G0030299.1 mouse_genomes_project 6 114957475 114963113 - MGP_WSBEiJ_P0078097 Prrt3 protein_coding protein_coding MGP_WSBEiJ_T0014911.1 MGP_WSBEiJ_G0013041.1 mouse_genomes_project 6 58198256 58198460 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077777.1 MGP_WSBEiJ_G0030242.1 mouse_genomes_project 6 97860155 98090595 - MGP_WSBEiJ_P0077777 Fam19a4 protein_coding protein_coding MGP_WSBEiJ_T0077778.1 MGP_WSBEiJ_G0030242.1 mouse_genomes_project 6 98086807 98090575 - Fam19a4 protein_coding retained_intron MGP_WSBEiJ_T0005026.1 MGP_WSBEiJ_G0004287.1 mouse_genomes_project 6 138485132 138491648 + Gm19434 antisense antisense MGP_WSBEiJ_T0008554.1 MGP_WSBEiJ_G0006919.1 mouse_genomes_project 6 102813145 102832838 + Gm44169 lincRNA lincRNA MGP_WSBEiJ_T0000204.1 MGP_WSBEiJ_G0000154.1 mouse_genomes_project 6 70162609 70163176 - MGP_WSBEiJ_P0000204 IG_V_gene IG_V_gene MGP_WSBEiJ_T0099651.1 MGP_WSBEiJ_G0038314.1 mouse_genomes_project 6 55248180 55248312 - Gm24709 snoRNA snoRNA MGP_WSBEiJ_T0004915.1 MGP_WSBEiJ_G0004210.1 mouse_genomes_project 6 84099407 84120602 - Vax2os antisense antisense MGP_WSBEiJ_T0004916.1 MGP_WSBEiJ_G0004210.1 mouse_genomes_project 6 84106730 84119333 - Vax2os antisense antisense MGP_WSBEiJ_T0004917.1 MGP_WSBEiJ_G0004210.1 mouse_genomes_project 6 84109923 84111337 - Vax2os antisense antisense MGP_WSBEiJ_T0004918.1 MGP_WSBEiJ_G0004210.1 mouse_genomes_project 6 84110273 84111416 - Vax2os antisense antisense MGP_WSBEiJ_T0079316.1 MGP_WSBEiJ_G0030575.1 mouse_genomes_project 6 138256868 138262023 + MGP_WSBEiJ_P0079316 Apold1 protein_coding protein_coding MGP_WSBEiJ_T0079192.1 MGP_WSBEiJ_G0030522.1 mouse_genomes_project 6 132184315 132200438 - MGP_WSBEiJ_P0079192 Klrk1 protein_coding protein_coding MGP_WSBEiJ_T0079193.1 MGP_WSBEiJ_G0030522.1 mouse_genomes_project 6 132186403 132199343 - MGP_WSBEiJ_P0079193 Klrk1 protein_coding protein_coding MGP_WSBEiJ_T0079194.1 MGP_WSBEiJ_G0030522.1 mouse_genomes_project 6 132186449 132200415 - MGP_WSBEiJ_P0079194 Klrk1 protein_coding protein_coding MGP_WSBEiJ_T0079195.1 MGP_WSBEiJ_G0030522.1 mouse_genomes_project 6 132190469 132199151 - Klrk1 protein_coding retained_intron MGP_WSBEiJ_T0079196.1 MGP_WSBEiJ_G0030522.1 mouse_genomes_project 6 132190544 132199255 - Klrk1 protein_coding retained_intron MGP_WSBEiJ_T0079197.1 MGP_WSBEiJ_G0030522.1 mouse_genomes_project 6 132197173 132200434 - Klrk1 protein_coding retained_intron MGP_WSBEiJ_T0002019.1 MGP_WSBEiJ_G0001939.1 mouse_genomes_project 6 88502231 88505371 - TEC TEC MGP_WSBEiJ_T0077209.1 MGP_WSBEiJ_G0030122.1 mouse_genomes_project 6 85960362 85976052 + MGP_WSBEiJ_P0077209 Smyd5 protein_coding protein_coding MGP_WSBEiJ_T0077210.1 MGP_WSBEiJ_G0030122.1 mouse_genomes_project 6 85960375 85969904 + Smyd5 protein_coding retained_intron MGP_WSBEiJ_T0077211.1 MGP_WSBEiJ_G0030122.1 mouse_genomes_project 6 85960446 85961187 + Smyd5 protein_coding retained_intron MGP_WSBEiJ_T0077212.1 MGP_WSBEiJ_G0030122.1 mouse_genomes_project 6 85968705 85971517 + Smyd5 protein_coding retained_intron MGP_WSBEiJ_T0077213.1 MGP_WSBEiJ_G0030122.1 mouse_genomes_project 6 85971191 85975060 + Smyd5 protein_coding retained_intron MGP_WSBEiJ_T0077214.1 MGP_WSBEiJ_G0030122.1 mouse_genomes_project 6 85971286 85974577 + Smyd5 protein_coding processed_transcript MGP_WSBEiJ_T0077215.1 MGP_WSBEiJ_G0030122.1 mouse_genomes_project 6 85971301 85974814 + Smyd5 protein_coding retained_intron MGP_WSBEiJ_T0077216.1 MGP_WSBEiJ_G0030122.1 mouse_genomes_project 6 85972137 85975049 + Smyd5 protein_coding processed_transcript MGP_WSBEiJ_T0079137.1 MGP_WSBEiJ_G0030506.1 mouse_genomes_project 6 131366797 131501428 + MGP_WSBEiJ_P0079137 Clec2g protein_coding protein_coding MGP_WSBEiJ_T0015099.1 MGP_WSBEiJ_G0013229.1 mouse_genomes_project 6 123263565 123263890 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077587.1 MGP_WSBEiJ_G0030199.1 mouse_genomes_project 6 90861584 90868239 + MGP_WSBEiJ_P0077587 Vmn1r50 protein_coding protein_coding MGP_WSBEiJ_T0077588.1 MGP_WSBEiJ_G0030199.1 mouse_genomes_project 6 90867306 90868239 + MGP_WSBEiJ_P0077588 Vmn1r50 protein_coding protein_coding MGP_WSBEiJ_T0014950.1 MGP_WSBEiJ_G0013080.1 mouse_genomes_project 6 66572437 66573069 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008585.1 MGP_WSBEiJ_G0006946.1 mouse_genomes_project 6 126302276 126306378 + Gm43971 lincRNA lincRNA MGP_WSBEiJ_T0097506.1 MGP_WSBEiJ_G0036170.1 mouse_genomes_project 6 38944491 38954743 + Gm37610 sense_overlapping sense_overlapping MGP_WSBEiJ_T0077968.1 MGP_WSBEiJ_G0030281.1 mouse_genomes_project 6 114140558 114380520 - MGP_WSBEiJ_P0077968 Srgap3 protein_coding protein_coding MGP_WSBEiJ_T0077969.1 MGP_WSBEiJ_G0030281.1 mouse_genomes_project 6 114140561 114380014 - MGP_WSBEiJ_P0077969 Srgap3 protein_coding protein_coding MGP_WSBEiJ_T0077970.1 MGP_WSBEiJ_G0030281.1 mouse_genomes_project 6 114163044 114191600 - MGP_WSBEiJ_P0077970 Srgap3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077971.1 MGP_WSBEiJ_G0030281.1 mouse_genomes_project 6 114191226 114380520 - Srgap3 protein_coding retained_intron MGP_WSBEiJ_T0077972.1 MGP_WSBEiJ_G0030281.1 mouse_genomes_project 6 114219820 114254573 - Srgap3 protein_coding retained_intron MGP_WSBEiJ_T0004860.1 MGP_WSBEiJ_G0004171.1 mouse_genomes_project 6 38027324 38033279 - Gm26807 antisense antisense MGP_WSBEiJ_T0001899.1 MGP_WSBEiJ_G0001819.1 mouse_genomes_project 6 26106042 26109298 + TEC TEC MGP_WSBEiJ_T0098424.1 MGP_WSBEiJ_G0037087.1 mouse_genomes_project 6 70903680 70903835 - Gm23485 snRNA snRNA MGP_WSBEiJ_T0075122.1 MGP_WSBEiJ_G0029639.1 mouse_genomes_project 6 12629081 12715478 + MGP_WSBEiJ_P0075122 Mdfic protein_coding protein_coding MGP_WSBEiJ_T0075123.1 MGP_WSBEiJ_G0029639.1 mouse_genomes_project 6 12629081 12715482 + MGP_WSBEiJ_P0075123 Mdfic protein_coding protein_coding MGP_WSBEiJ_T0075124.1 MGP_WSBEiJ_G0029639.1 mouse_genomes_project 6 12629123 12682966 + MGP_WSBEiJ_P0075124 Mdfic protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075125.1 MGP_WSBEiJ_G0029639.1 mouse_genomes_project 6 12629141 12685035 + MGP_WSBEiJ_P0075125 Mdfic protein_coding protein_coding MGP_WSBEiJ_T0075126.1 MGP_WSBEiJ_G0029639.1 mouse_genomes_project 6 12629507 12714122 + MGP_WSBEiJ_P0075126 Mdfic protein_coding protein_coding MGP_WSBEiJ_T0075127.1 MGP_WSBEiJ_G0029639.1 mouse_genomes_project 6 12636684 12682080 + MGP_WSBEiJ_P0075127 Mdfic protein_coding protein_coding MGP_WSBEiJ_T0077291.1 MGP_WSBEiJ_G0030142.1 mouse_genomes_project 6 87008511 87016551 + MGP_WSBEiJ_P0077291 Snrpg protein_coding protein_coding MGP_WSBEiJ_T0077292.1 MGP_WSBEiJ_G0030142.1 mouse_genomes_project 6 87008749 87013961 + Snrpg protein_coding retained_intron MGP_WSBEiJ_T0077293.1 MGP_WSBEiJ_G0030142.1 mouse_genomes_project 6 87008778 87016130 + Snrpg protein_coding processed_transcript MGP_WSBEiJ_T0077294.1 MGP_WSBEiJ_G0030142.1 mouse_genomes_project 6 87008811 87016081 + Snrpg protein_coding processed_transcript MGP_WSBEiJ_T0014812.1 MGP_WSBEiJ_G0012942.1 mouse_genomes_project 6 15136813 15137749 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075361.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26524466 26542650 - MGP_WSBEiJ_P0075361 Impdh1 protein_coding protein_coding MGP_WSBEiJ_T0075362.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26524469 26538568 - MGP_WSBEiJ_P0075362 Impdh1 protein_coding protein_coding MGP_WSBEiJ_T0075363.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26524469 26538616 - MGP_WSBEiJ_P0075363 Impdh1 protein_coding protein_coding MGP_WSBEiJ_T0075364.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26524469 26542683 - MGP_WSBEiJ_P0075364 Impdh1 protein_coding protein_coding MGP_WSBEiJ_T0075365.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26524470 26542661 - MGP_WSBEiJ_P0075365 Impdh1 protein_coding protein_coding MGP_WSBEiJ_T0075366.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26524477 26527451 - MGP_WSBEiJ_P0075366 Impdh1 protein_coding protein_coding MGP_WSBEiJ_T0075367.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26528592 26530469 - Impdh1 protein_coding retained_intron MGP_WSBEiJ_T0075368.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26529137 26542596 - MGP_WSBEiJ_P0075368 Impdh1 protein_coding protein_coding MGP_WSBEiJ_T0075369.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26531853 26534637 - Impdh1 protein_coding retained_intron MGP_WSBEiJ_T0075370.1 MGP_WSBEiJ_G0029690.1 mouse_genomes_project 6 26532019 26542248 - MGP_WSBEiJ_P0075370 Impdh1 protein_coding protein_coding MGP_WSBEiJ_T0001885.1 MGP_WSBEiJ_G0001805.1 mouse_genomes_project 6 14725797 14727176 - TEC TEC MGP_WSBEiJ_T0004845.1 MGP_WSBEiJ_G0004158.1 mouse_genomes_project 6 29984286 29988790 + Plxna4os1 antisense antisense MGP_WSBEiJ_T0075993.1 MGP_WSBEiJ_G0029827.1 mouse_genomes_project 6 40363593 40364686 + MGP_WSBEiJ_P0075993 Tas2r135 protein_coding protein_coding MGP_WSBEiJ_T0075930.1 MGP_WSBEiJ_G0029809.1 mouse_genomes_project 6 39582423 39583710 + MGP_WSBEiJ_P0075930 1700034O15Rik protein_coding protein_coding MGP_WSBEiJ_T0078969.1 MGP_WSBEiJ_G0030466.1 mouse_genomes_project 6 127609115 127646683 - MGP_WSBEiJ_P0078969 Cd9 protein_coding protein_coding MGP_WSBEiJ_T0078970.1 MGP_WSBEiJ_G0030466.1 mouse_genomes_project 6 127609438 127627086 - Cd9 protein_coding processed_transcript MGP_WSBEiJ_T0078971.1 MGP_WSBEiJ_G0030466.1 mouse_genomes_project 6 127610965 127611870 - Cd9 protein_coding retained_intron MGP_WSBEiJ_T0002123.1 MGP_WSBEiJ_G0002042.1 mouse_genomes_project 6 142131716 142132216 + TEC TEC MGP_WSBEiJ_T0097451.1 MGP_WSBEiJ_G0036121.1 mouse_genomes_project 6 131978678 131979272 + Gm43914 sense_intronic sense_intronic MGP_WSBEiJ_T0076705.1 MGP_WSBEiJ_G0030025.1 mouse_genomes_project 6 71083651 71138447 - MGP_WSBEiJ_P0076705 Smyd1 protein_coding protein_coding MGP_WSBEiJ_T0076706.1 MGP_WSBEiJ_G0030025.1 mouse_genomes_project 6 71083653 71138419 - MGP_WSBEiJ_P0076706 Smyd1 protein_coding protein_coding MGP_WSBEiJ_T0076707.1 MGP_WSBEiJ_G0030025.1 mouse_genomes_project 6 71085059 71200114 - MGP_WSBEiJ_P0076707 Smyd1 protein_coding protein_coding MGP_WSBEiJ_T0076708.1 MGP_WSBEiJ_G0030025.1 mouse_genomes_project 6 71085213 71086560 - MGP_WSBEiJ_P0076708 Smyd1 protein_coding protein_coding MGP_WSBEiJ_T0076709.1 MGP_WSBEiJ_G0030025.1 mouse_genomes_project 6 71135764 71138398 - MGP_WSBEiJ_P0076709 Smyd1 protein_coding protein_coding MGP_WSBEiJ_T0076714.1 MGP_WSBEiJ_G0030025.1 mouse_genomes_project 6 71187364 71200087 - MGP_WSBEiJ_P0076714 Smyd1 protein_coding protein_coding MGP_WSBEiJ_T0077466.1 MGP_WSBEiJ_G0030175.1 mouse_genomes_project 6 88802365 88824315 + MGP_WSBEiJ_P0077466 Rpn1 protein_coding protein_coding MGP_WSBEiJ_T0077467.1 MGP_WSBEiJ_G0030175.1 mouse_genomes_project 6 88802446 88813381 + MGP_WSBEiJ_P0077467 Rpn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077468.1 MGP_WSBEiJ_G0030175.1 mouse_genomes_project 6 88811634 88818809 + Rpn1 protein_coding retained_intron MGP_WSBEiJ_T0077469.1 MGP_WSBEiJ_G0030175.1 mouse_genomes_project 6 88817006 88819066 + Rpn1 protein_coding retained_intron MGP_WSBEiJ_T0077470.1 MGP_WSBEiJ_G0030175.1 mouse_genomes_project 6 88819274 88822397 + Rpn1 protein_coding retained_intron MGP_WSBEiJ_T0002676.1 MGP_WSBEiJ_G0002560.1 mouse_genomes_project 6 39091752 39092025 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0000189.1 MGP_WSBEiJ_G0000142.1 mouse_genomes_project 6 69748863 69749589 - MGP_WSBEiJ_P0000189 Igkv1-35 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000190.1 MGP_WSBEiJ_G0000142.1 mouse_genomes_project 6 69748863 69749589 - MGP_WSBEiJ_P0000190 Igkv1-35 IG_V_gene IG_V_gene MGP_WSBEiJ_T0004973.1 MGP_WSBEiJ_G0004243.1 mouse_genomes_project 6 110011852 110098028 - 0610040F04Rik antisense antisense MGP_WSBEiJ_T0004974.1 MGP_WSBEiJ_G0004243.1 mouse_genomes_project 6 110045298 110048950 - 0610040F04Rik antisense antisense MGP_WSBEiJ_T0014977.1 MGP_WSBEiJ_G0013107.1 mouse_genomes_project 6 73352281 73352705 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015071.1 MGP_WSBEiJ_G0013201.1 mouse_genomes_project 6 114412524 114412695 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011429.1 MGP_WSBEiJ_G0009586.1 mouse_genomes_project 6 14677007 14677193 + Gm28008 misc_RNA misc_RNA MGP_WSBEiJ_T0015030.1 MGP_WSBEiJ_G0013160.1 mouse_genomes_project 6 96255015 96255366 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014910.1 MGP_WSBEiJ_G0013040.1 mouse_genomes_project 6 58035157 58037591 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014792.1 MGP_WSBEiJ_G0012922.1 mouse_genomes_project 6 5410181 5411428 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079872.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153323045 153336180 + Bicd1 protein_coding retained_intron MGP_WSBEiJ_T0079873.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153323143 153486066 + MGP_WSBEiJ_P0079873 Bicd1 protein_coding protein_coding MGP_WSBEiJ_T0079874.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153323175 153480069 + MGP_WSBEiJ_P0079874 Bicd1 protein_coding protein_coding MGP_WSBEiJ_T0079875.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153323228 153421812 + Bicd1 protein_coding retained_intron MGP_WSBEiJ_T0079876.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153323588 153479192 + MGP_WSBEiJ_P0079876 Bicd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079877.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153323588 153479192 + MGP_WSBEiJ_P0079877 Bicd1 protein_coding protein_coding MGP_WSBEiJ_T0079878.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153431289 153439072 + Bicd1 protein_coding retained_intron MGP_WSBEiJ_T0079879.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153436231 153440194 + MGP_WSBEiJ_P0079879 Bicd1 protein_coding protein_coding MGP_WSBEiJ_T0079880.1 MGP_WSBEiJ_G0030678.1 mouse_genomes_project 6 153466536 153481095 + Bicd1 protein_coding retained_intron MGP_WSBEiJ_T0002115.1 MGP_WSBEiJ_G0002034.1 mouse_genomes_project 6 137875346 137875986 + TEC TEC MGP_WSBEiJ_T0004897.1 MGP_WSBEiJ_G0004199.1 mouse_genomes_project 6 72306891 72308321 - Gm45051 antisense antisense MGP_WSBEiJ_T0002014.1 MGP_WSBEiJ_G0001934.1 mouse_genomes_project 6 87867045 87869110 - TEC TEC MGP_WSBEiJ_T0077188.1 MGP_WSBEiJ_G0030116.1 mouse_genomes_project 6 85594666 85612240 - protein_coding lincRNA MGP_WSBEiJ_T0000209.1 MGP_WSBEiJ_G0000157.1 mouse_genomes_project 6 70420277 70420867 + MGP_WSBEiJ_P0000209 IG_V_gene IG_V_gene MGP_WSBEiJ_T0078760.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126819232 126833921 - MGP_WSBEiJ_P0078760 Ptpn6 protein_coding protein_coding MGP_WSBEiJ_T0078761.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126819232 126839511 - MGP_WSBEiJ_P0078761 Ptpn6 protein_coding protein_coding MGP_WSBEiJ_T0078762.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126819232 126839422 - MGP_WSBEiJ_P0078762 Ptpn6 protein_coding protein_coding MGP_WSBEiJ_T0078763.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126819245 126820368 - MGP_WSBEiJ_P0078763 Ptpn6 protein_coding protein_coding MGP_WSBEiJ_T0078764.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126819633 126839381 - MGP_WSBEiJ_P0078764 Ptpn6 protein_coding protein_coding MGP_WSBEiJ_T0078765.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126823463 126827285 - MGP_WSBEiJ_P0078765 Ptpn6 protein_coding protein_coding MGP_WSBEiJ_T0078766.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126823511 126827235 - MGP_WSBEiJ_P0078766 Ptpn6 protein_coding protein_coding MGP_WSBEiJ_T0078767.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126827570 126828532 - Ptpn6 protein_coding retained_intron MGP_WSBEiJ_T0078768.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126828724 126833538 - Ptpn6 protein_coding processed_transcript MGP_WSBEiJ_T0078769.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126833128 126833849 - MGP_WSBEiJ_P0078769 Ptpn6 protein_coding protein_coding MGP_WSBEiJ_T0078770.1 MGP_WSBEiJ_G0030429.1 mouse_genomes_project 6 126833421 126833877 - Ptpn6 protein_coding retained_intron MGP_WSBEiJ_T0008525.1 MGP_WSBEiJ_G0006898.1 mouse_genomes_project 6 88481121 88482459 + Gm43904 lincRNA lincRNA MGP_WSBEiJ_T0005547.1 MGP_WSBEiJ_G0004668.1 mouse_genomes_project 6 87521963 87523005 - 2610306M01Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0079741.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150580861 150590362 + protein_coding processed_transcript MGP_WSBEiJ_T0079742.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150580871 150618425 + MGP_WSBEiJ_P0079742 protein_coding protein_coding MGP_WSBEiJ_T0079743.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150590313 150617416 + MGP_WSBEiJ_P0079743 protein_coding protein_coding MGP_WSBEiJ_T0079744.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150590313 150617416 + MGP_WSBEiJ_P0079744 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079745.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150590313 150617416 + MGP_WSBEiJ_P0079745 protein_coding protein_coding MGP_WSBEiJ_T0079746.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150590313 150617416 + MGP_WSBEiJ_P0079746 protein_coding protein_coding MGP_WSBEiJ_T0079747.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150605150 150607852 + protein_coding retained_intron MGP_WSBEiJ_T0079748.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150607310 150608615 + protein_coding retained_intron MGP_WSBEiJ_T0079749.1 MGP_WSBEiJ_G0030657.1 mouse_genomes_project 6 150615297 150618418 + protein_coding retained_intron MGP_WSBEiJ_T0076644.1 MGP_WSBEiJ_G0030007.1 mouse_genomes_project 6 65252581 65253987 + MGP_WSBEiJ_P0076644 4930544G11Rik protein_coding protein_coding MGP_WSBEiJ_T0005014.1 MGP_WSBEiJ_G0004277.1 mouse_genomes_project 6 130724764 130727612 + Gm26770 antisense antisense MGP_WSBEiJ_T0015018.1 MGP_WSBEiJ_G0013148.1 mouse_genomes_project 6 93050780 93052560 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008570.1 MGP_WSBEiJ_G0006933.1 mouse_genomes_project 6 118933031 118936061 - Gm4640 lincRNA lincRNA MGP_WSBEiJ_T0076877.1 MGP_WSBEiJ_G0030056.1 mouse_genomes_project 6 72990740 72991492 - MGP_WSBEiJ_P0076877 protein_coding protein_coding MGP_WSBEiJ_T0000298.1 MGP_WSBEiJ_G0000246.1 mouse_genomes_project 6 69858213 69858782 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0017654.1 MGP_WSBEiJ_G0015047.1 mouse_genomes_project 6 37319053 37334962 + 8030453O22Rik processed_transcript antisense MGP_WSBEiJ_T0017655.1 MGP_WSBEiJ_G0015047.1 mouse_genomes_project 6 37319062 37338793 + 8030453O22Rik processed_transcript antisense MGP_WSBEiJ_T0017656.1 MGP_WSBEiJ_G0015047.1 mouse_genomes_project 6 37319066 37319815 + 8030453O22Rik processed_transcript retained_intron MGP_WSBEiJ_T0079474.1 MGP_WSBEiJ_G0030607.1 mouse_genomes_project 6 142191618 142193074 - MGP_WSBEiJ_P0079474 Igbp1b protein_coding protein_coding MGP_WSBEiJ_T0076582.1 MGP_WSBEiJ_G0029994.1 mouse_genomes_project 6 58342850 58427918 - MGP_WSBEiJ_P0076582 Gprin3 protein_coding protein_coding MGP_WSBEiJ_T0099694.1 MGP_WSBEiJ_G0038357.1 mouse_genomes_project 6 138899651 138899766 + Gm25136 snoRNA snoRNA MGP_WSBEiJ_T0008425.1 MGP_WSBEiJ_G0006824.1 mouse_genomes_project 6 32205227 32207764 - Gm13861 lincRNA lincRNA MGP_WSBEiJ_T0076317.1 MGP_WSBEiJ_G0029916.1 mouse_genomes_project 6 50662020 50665377 + MGP_WSBEiJ_P0076317 5730596B20Rik protein_coding protein_coding MGP_WSBEiJ_T0004947.1 MGP_WSBEiJ_G0004226.1 mouse_genomes_project 6 89177457 89178283 + Gm44264 antisense antisense MGP_WSBEiJ_T0004838.1 MGP_WSBEiJ_G0004152.1 mouse_genomes_project 6 26857535 26859540 + Gm26627 antisense antisense MGP_WSBEiJ_T0002614.1 MGP_WSBEiJ_G0002505.1 mouse_genomes_project 6 38924482 38924953 + MGP_WSBEiJ_P0002614 Trbv5 TR_V_gene TR_V_gene MGP_WSBEiJ_T0077348.1 MGP_WSBEiJ_G0030151.1 mouse_genomes_project 6 87350655 87393487 - MGP_WSBEiJ_P0077348 Gmcl1 protein_coding protein_coding MGP_WSBEiJ_T0077349.1 MGP_WSBEiJ_G0030151.1 mouse_genomes_project 6 87373668 87377244 - Gmcl1 protein_coding retained_intron MGP_WSBEiJ_T0077350.1 MGP_WSBEiJ_G0030151.1 mouse_genomes_project 6 87373752 87378700 - Gmcl1 protein_coding retained_intron MGP_WSBEiJ_T0077351.1 MGP_WSBEiJ_G0030151.1 mouse_genomes_project 6 87380303 87393344 - MGP_WSBEiJ_P0077351 Gmcl1 protein_coding protein_coding MGP_WSBEiJ_T0014905.1 MGP_WSBEiJ_G0013035.1 mouse_genomes_project 6 57036963 57037222 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077295.1 MGP_WSBEiJ_G0030143.1 mouse_genomes_project 6 87023193 87035016 - MGP_WSBEiJ_P0077295 Pcyox1 protein_coding protein_coding MGP_WSBEiJ_T0077296.1 MGP_WSBEiJ_G0030143.1 mouse_genomes_project 6 87025858 87035003 - MGP_WSBEiJ_P0077296 Pcyox1 protein_coding protein_coding MGP_WSBEiJ_T0077297.1 MGP_WSBEiJ_G0030143.1 mouse_genomes_project 6 87026176 87029531 - MGP_WSBEiJ_P0077297 Pcyox1 protein_coding protein_coding MGP_WSBEiJ_T0077298.1 MGP_WSBEiJ_G0030143.1 mouse_genomes_project 6 87028871 87035005 - MGP_WSBEiJ_P0077298 Pcyox1 protein_coding protein_coding MGP_WSBEiJ_T0077299.1 MGP_WSBEiJ_G0030143.1 mouse_genomes_project 6 87031642 87034488 - Pcyox1 protein_coding retained_intron MGP_WSBEiJ_T0077300.1 MGP_WSBEiJ_G0030143.1 mouse_genomes_project 6 87033644 87034981 - Pcyox1 protein_coding retained_intron MGP_WSBEiJ_T0076226.1 MGP_WSBEiJ_G0029896.1 mouse_genomes_project 6 47359314 47495573 - MGP_WSBEiJ_P0076226 Igf2bp3 protein_coding protein_coding MGP_WSBEiJ_T0076227.1 MGP_WSBEiJ_G0029896.1 mouse_genomes_project 6 47362219 47368294 - Igf2bp3 protein_coding retained_intron MGP_WSBEiJ_T0076228.1 MGP_WSBEiJ_G0029896.1 mouse_genomes_project 6 47367192 47494776 - Igf2bp3 protein_coding retained_intron MGP_WSBEiJ_T0076229.1 MGP_WSBEiJ_G0029896.1 mouse_genomes_project 6 47382441 47386149 - Igf2bp3 protein_coding processed_transcript MGP_WSBEiJ_T0076230.1 MGP_WSBEiJ_G0029896.1 mouse_genomes_project 6 47444399 47495319 - Igf2bp3 protein_coding processed_transcript MGP_WSBEiJ_T0078938.1 MGP_WSBEiJ_G0030457.1 mouse_genomes_project 6 127326737 127328499 + Mrpl51 protein_coding processed_transcript MGP_WSBEiJ_T0078939.1 MGP_WSBEiJ_G0030457.1 mouse_genomes_project 6 127327101 127331210 + MGP_WSBEiJ_P0078939 Mrpl51 protein_coding protein_coding MGP_WSBEiJ_T0078940.1 MGP_WSBEiJ_G0030457.1 mouse_genomes_project 6 127327153 127327815 + Mrpl51 protein_coding retained_intron MGP_WSBEiJ_T0015148.1 MGP_WSBEiJ_G0013278.1 mouse_genomes_project 6 134564749 134564862 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100888.1 MGP_WSBEiJ_G0039346.1 mouse_genomes_project 6 39285593 39286805 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0074902.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 208129 313901 + MGP_WSBEiJ_P0074902 Vps50 protein_coding protein_coding MGP_WSBEiJ_T0074903.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 208151 311474 + MGP_WSBEiJ_P0074903 Vps50 protein_coding protein_coding MGP_WSBEiJ_T0074904.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 208169 313685 + MGP_WSBEiJ_P0074904 Vps50 protein_coding protein_coding MGP_WSBEiJ_T0074905.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 208173 232745 + Vps50 protein_coding retained_intron MGP_WSBEiJ_T0074906.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 229447 244158 + Vps50 protein_coding processed_transcript MGP_WSBEiJ_T0074907.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 273549 313685 + Vps50 protein_coding retained_intron MGP_WSBEiJ_T0074908.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 286252 313685 + Vps50 protein_coding processed_transcript MGP_WSBEiJ_T0074909.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 298604 303609 + Vps50 protein_coding retained_intron MGP_WSBEiJ_T0074910.1 MGP_WSBEiJ_G0029595.1 mouse_genomes_project 6 304569 310626 + Vps50 protein_coding processed_transcript MGP_WSBEiJ_T0015058.1 MGP_WSBEiJ_G0013188.1 mouse_genomes_project 6 108758689 108758915 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008643.1 MGP_WSBEiJ_G0006986.1 mouse_genomes_project 6 151537297 151540420 - lincRNA lincRNA MGP_WSBEiJ_T0078840.1 MGP_WSBEiJ_G0030442.1 mouse_genomes_project 6 126970684 126994213 - MGP_WSBEiJ_P0078840 Cd4 protein_coding protein_coding MGP_WSBEiJ_T0078841.1 MGP_WSBEiJ_G0030442.1 mouse_genomes_project 6 126972623 126976268 - Cd4 protein_coding processed_transcript MGP_WSBEiJ_T0078842.1 MGP_WSBEiJ_G0030442.1 mouse_genomes_project 6 126972723 126976485 - Cd4 protein_coding processed_transcript MGP_WSBEiJ_T0078843.1 MGP_WSBEiJ_G0030442.1 mouse_genomes_project 6 126973328 126994191 - Cd4 protein_coding retained_intron MGP_WSBEiJ_T0078844.1 MGP_WSBEiJ_G0030442.1 mouse_genomes_project 6 126984732 126994192 - Cd4 protein_coding retained_intron MGP_WSBEiJ_T0001964.1 MGP_WSBEiJ_G0001884.1 mouse_genomes_project 6 71436963 71440197 - TEC TEC MGP_WSBEiJ_T0078650.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124459633 124489371 - MGP_WSBEiJ_P0078650 Apobec1 protein_coding protein_coding MGP_WSBEiJ_T0078651.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124459640 124486818 - MGP_WSBEiJ_P0078651 Apobec1 protein_coding protein_coding MGP_WSBEiJ_T0078652.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124459642 124489298 - MGP_WSBEiJ_P0078652 Apobec1 protein_coding protein_coding MGP_WSBEiJ_T0078653.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124463142 124489314 - MGP_WSBEiJ_P0078653 Apobec1 protein_coding protein_coding MGP_WSBEiJ_T0078654.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124463168 124487049 - MGP_WSBEiJ_P0078654 Apobec1 protein_coding protein_coding MGP_WSBEiJ_T0078655.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124463350 124489256 - MGP_WSBEiJ_P0078655 Apobec1 protein_coding protein_coding MGP_WSBEiJ_T0078656.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124474011 124489297 - MGP_WSBEiJ_P0078656 Apobec1 protein_coding protein_coding MGP_WSBEiJ_T0078657.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124474744 124489291 - Apobec1 protein_coding retained_intron MGP_WSBEiJ_T0078658.1 MGP_WSBEiJ_G0030398.1 mouse_genomes_project 6 124483318 124487129 - Apobec1 protein_coding retained_intron MGP_WSBEiJ_T0014820.1 MGP_WSBEiJ_G0012950.1 mouse_genomes_project 6 19377999 19378572 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076927.1 MGP_WSBEiJ_G0030070.1 mouse_genomes_project 6 82252745 82291250 + MGP_WSBEiJ_P0076927 Gcfc2 protein_coding protein_coding MGP_WSBEiJ_T0076928.1 MGP_WSBEiJ_G0030070.1 mouse_genomes_project 6 82252749 82290591 + MGP_WSBEiJ_P0076928 Gcfc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076929.1 MGP_WSBEiJ_G0030070.1 mouse_genomes_project 6 82252756 82274683 + Gcfc2 protein_coding retained_intron MGP_WSBEiJ_T0076930.1 MGP_WSBEiJ_G0030070.1 mouse_genomes_project 6 82260984 82261445 + Gcfc2 protein_coding retained_intron MGP_WSBEiJ_T0076931.1 MGP_WSBEiJ_G0030070.1 mouse_genomes_project 6 82263290 82264725 + Gcfc2 protein_coding retained_intron MGP_WSBEiJ_T0076932.1 MGP_WSBEiJ_G0030070.1 mouse_genomes_project 6 82271811 82274183 + Gcfc2 protein_coding retained_intron MGP_WSBEiJ_T0076933.1 MGP_WSBEiJ_G0030070.1 mouse_genomes_project 6 82276960 82289397 + MGP_WSBEiJ_P0076933 Gcfc2 protein_coding protein_coding MGP_WSBEiJ_T0076934.1 MGP_WSBEiJ_G0030070.1 mouse_genomes_project 6 82280080 82288197 + Gcfc2 protein_coding retained_intron MGP_WSBEiJ_T0075560.1 MGP_WSBEiJ_G0029719.1 mouse_genomes_project 6 28180072 28323204 - MGP_WSBEiJ_P0075560 Copg2 protein_coding protein_coding MGP_WSBEiJ_T0075561.1 MGP_WSBEiJ_G0029719.1 mouse_genomes_project 6 28180930 28323259 - MGP_WSBEiJ_P0075561 Copg2 protein_coding protein_coding MGP_WSBEiJ_T0075562.1 MGP_WSBEiJ_G0029719.1 mouse_genomes_project 6 28244163 28323175 - Copg2 protein_coding processed_transcript MGP_WSBEiJ_T0075563.1 MGP_WSBEiJ_G0029719.1 mouse_genomes_project 6 28244653 28323229 - Copg2 protein_coding processed_transcript MGP_WSBEiJ_T0075564.1 MGP_WSBEiJ_G0029719.1 mouse_genomes_project 6 28281007 28323195 - Copg2 protein_coding processed_transcript MGP_WSBEiJ_T0075565.1 MGP_WSBEiJ_G0029719.1 mouse_genomes_project 6 28281383 28322891 - Copg2 protein_coding processed_transcript MGP_WSBEiJ_T0075566.1 MGP_WSBEiJ_G0029719.1 mouse_genomes_project 6 28321361 28322902 - Copg2 protein_coding processed_transcript MGP_WSBEiJ_T0075567.1 MGP_WSBEiJ_G0029719.1 mouse_genomes_project 6 28322579 28323213 - Copg2 protein_coding processed_transcript MGP_WSBEiJ_T0000279.1 MGP_WSBEiJ_G0000227.1 mouse_genomes_project 6 67905681 67915289 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0002514.1 MGP_WSBEiJ_G0002424.1 mouse_genomes_project 6 39422186 39422236 + MGP_WSBEiJ_P0002514 Trbj1-3 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002515.1 MGP_WSBEiJ_G0002424.1 mouse_genomes_project 6 39422186 39422240 + Trbj1-3 TR_J_gene processed_transcript MGP_WSBEiJ_T0099697.1 MGP_WSBEiJ_G0038360.1 mouse_genomes_project 6 149143688 149143775 + Gm23498 snoRNA snoRNA MGP_WSBEiJ_T0079768.1 MGP_WSBEiJ_G0030661.1 mouse_genomes_project 6 150824520 150829046 + MGP_WSBEiJ_P0079768 Rep15 protein_coding protein_coding MGP_WSBEiJ_T0014888.1 MGP_WSBEiJ_G0013018.1 mouse_genomes_project 6 48179505 48181102 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0074994.1 MGP_WSBEiJ_G0029612.1 mouse_genomes_project 6 2836711 3017787 - MGP_WSBEiJ_P0074994 Slc25a13 protein_coding protein_coding MGP_WSBEiJ_T0074995.1 MGP_WSBEiJ_G0029612.1 mouse_genomes_project 6 2836712 3017842 - MGP_WSBEiJ_P0074995 Slc25a13 protein_coding protein_coding MGP_WSBEiJ_T0074996.1 MGP_WSBEiJ_G0029612.1 mouse_genomes_project 6 2863467 2890512 - Slc25a13 protein_coding processed_transcript MGP_WSBEiJ_T0074997.1 MGP_WSBEiJ_G0029612.1 mouse_genomes_project 6 2913088 2973933 - Slc25a13 protein_coding processed_transcript MGP_WSBEiJ_T0074998.1 MGP_WSBEiJ_G0029612.1 mouse_genomes_project 6 2929902 2991259 - Slc25a13 protein_coding retained_intron MGP_WSBEiJ_T0015115.1 MGP_WSBEiJ_G0013245.1 mouse_genomes_project 6 125049110 125049204 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008637.1 MGP_WSBEiJ_G0006983.1 mouse_genomes_project 6 150987614 151020344 + E330012B07Rik lincRNA lincRNA MGP_WSBEiJ_T0008638.1 MGP_WSBEiJ_G0006983.1 mouse_genomes_project 6 150987632 151011060 + E330012B07Rik lincRNA lincRNA MGP_WSBEiJ_T0008584.1 MGP_WSBEiJ_G0006945.1 mouse_genomes_project 6 124262584 124263894 + 1700063H04Rik lincRNA lincRNA MGP_WSBEiJ_T0077484.1 MGP_WSBEiJ_G0030179.1 mouse_genomes_project 6 89199116 89232828 + MGP_WSBEiJ_P0077484 Ruvbl1 protein_coding protein_coding MGP_WSBEiJ_T0077485.1 MGP_WSBEiJ_G0030179.1 mouse_genomes_project 6 89199434 89217533 + MGP_WSBEiJ_P0077485 Ruvbl1 protein_coding protein_coding MGP_WSBEiJ_T0079466.1 MGP_WSBEiJ_G0030606.1 mouse_genomes_project 6 141864070 142111438 - MGP_WSBEiJ_P0079466 Lmo3 protein_coding protein_coding MGP_WSBEiJ_T0079467.1 MGP_WSBEiJ_G0030606.1 mouse_genomes_project 6 141865350 141926912 - MGP_WSBEiJ_P0079467 Lmo3 protein_coding protein_coding MGP_WSBEiJ_T0079468.1 MGP_WSBEiJ_G0030606.1 mouse_genomes_project 6 141866103 141932223 - MGP_WSBEiJ_P0079468 Lmo3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079469.1 MGP_WSBEiJ_G0030606.1 mouse_genomes_project 6 141866732 141928422 - MGP_WSBEiJ_P0079469 Lmo3 protein_coding protein_coding MGP_WSBEiJ_T0079470.1 MGP_WSBEiJ_G0030606.1 mouse_genomes_project 6 141866736 141928365 - MGP_WSBEiJ_P0079470 Lmo3 protein_coding protein_coding MGP_WSBEiJ_T0079471.1 MGP_WSBEiJ_G0030606.1 mouse_genomes_project 6 141867040 141934769 - MGP_WSBEiJ_P0079471 Lmo3 protein_coding protein_coding MGP_WSBEiJ_T0079472.1 MGP_WSBEiJ_G0030606.1 mouse_genomes_project 6 141879891 141928447 - MGP_WSBEiJ_P0079472 Lmo3 protein_coding protein_coding MGP_WSBEiJ_T0079473.1 MGP_WSBEiJ_G0030606.1 mouse_genomes_project 6 141921495 141934423 - MGP_WSBEiJ_P0079473 Lmo3 protein_coding protein_coding MGP_WSBEiJ_T0002081.1 MGP_WSBEiJ_G0002001.1 mouse_genomes_project 6 117034741 117035155 + TEC TEC MGP_WSBEiJ_T0077267.1 MGP_WSBEiJ_G0030137.1 mouse_genomes_project 6 86545465 86566765 - MGP_WSBEiJ_P0077267 Dusp11 protein_coding protein_coding MGP_WSBEiJ_T0077268.1 MGP_WSBEiJ_G0030137.1 mouse_genomes_project 6 86550944 86563744 - MGP_WSBEiJ_P0077268 Dusp11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077269.1 MGP_WSBEiJ_G0030137.1 mouse_genomes_project 6 86554192 86555366 - Dusp11 protein_coding retained_intron MGP_WSBEiJ_T0077270.1 MGP_WSBEiJ_G0030137.1 mouse_genomes_project 6 86554197 86558425 - Dusp11 protein_coding processed_transcript MGP_WSBEiJ_T0077271.1 MGP_WSBEiJ_G0030137.1 mouse_genomes_project 6 86554520 86558309 - Dusp11 protein_coding retained_intron MGP_WSBEiJ_T0077272.1 MGP_WSBEiJ_G0030137.1 mouse_genomes_project 6 86559444 86566765 - Dusp11 protein_coding processed_transcript MGP_WSBEiJ_T0077273.1 MGP_WSBEiJ_G0030137.1 mouse_genomes_project 6 86559546 86566705 - Dusp11 protein_coding processed_transcript MGP_WSBEiJ_T0077274.1 MGP_WSBEiJ_G0030137.1 mouse_genomes_project 6 86565502 86566740 - Dusp11 protein_coding retained_intron MGP_WSBEiJ_T0075593.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30273314 30370195 - MGP_WSBEiJ_P0075593 Chchd3 protein_coding protein_coding MGP_WSBEiJ_T0075594.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30274555 30546895 - MGP_WSBEiJ_P0075594 Chchd3 protein_coding protein_coding MGP_WSBEiJ_T0075595.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30274562 30546871 - MGP_WSBEiJ_P0075595 Chchd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075596.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30274975 30375696 - Chchd3 protein_coding processed_transcript MGP_WSBEiJ_T0075597.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30274980 30375653 - Chchd3 protein_coding processed_transcript MGP_WSBEiJ_T0075598.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30274981 30375646 - Chchd3 protein_coding processed_transcript MGP_WSBEiJ_T0075599.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30274992 30286055 - Chchd3 protein_coding processed_transcript MGP_WSBEiJ_T0075600.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30275032 30301560 - Chchd3 protein_coding processed_transcript MGP_WSBEiJ_T0075601.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30286050 30546872 - MGP_WSBEiJ_P0075601 Chchd3 protein_coding protein_coding MGP_WSBEiJ_T0075602.1 MGP_WSBEiJ_G0029726.1 mouse_genomes_project 6 30330954 30546852 - MGP_WSBEiJ_P0075602 Chchd3 protein_coding protein_coding MGP_WSBEiJ_T0011456.1 MGP_WSBEiJ_G0009613.1 mouse_genomes_project 6 84110284 84110471 + Gm27772 misc_RNA misc_RNA MGP_WSBEiJ_T0076031.1 MGP_WSBEiJ_G0029850.1 mouse_genomes_project 6 41226335 41230650 + MGP_WSBEiJ_P0076031 Olfr434 protein_coding protein_coding MGP_WSBEiJ_T0076033.1 MGP_WSBEiJ_G0029850.1 mouse_genomes_project 6 41230151 41231207 + MGP_WSBEiJ_P0076033 Olfr434 protein_coding protein_coding MGP_WSBEiJ_T0014930.1 MGP_WSBEiJ_G0013060.1 mouse_genomes_project 6 64477429 64478167 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079830.1 MGP_WSBEiJ_G0030672.1 mouse_genomes_project 6 152795237 152808135 - MGP_WSBEiJ_P0079830 Fam60a protein_coding unknown_likely_coding MGP_WSBEiJ_T0079831.1 MGP_WSBEiJ_G0030672.1 mouse_genomes_project 6 152802941 152821112 - MGP_WSBEiJ_P0079831 Fam60a protein_coding protein_coding MGP_WSBEiJ_T0079832.1 MGP_WSBEiJ_G0030672.1 mouse_genomes_project 6 152819149 152821199 - Fam60a protein_coding processed_transcript MGP_WSBEiJ_T0011465.1 MGP_WSBEiJ_G0009622.1 mouse_genomes_project 6 113407739 113408054 + Gm26362 misc_RNA misc_RNA MGP_WSBEiJ_T0099652.1 MGP_WSBEiJ_G0038315.1 mouse_genomes_project 6 55266838 55266970 - Gm22493 snoRNA snoRNA MGP_WSBEiJ_T0008541.1 MGP_WSBEiJ_G0006909.1 mouse_genomes_project 6 92454213 92460496 + Gm45218 lincRNA lincRNA MGP_WSBEiJ_T0077925.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109641335 109982485 + MGP_WSBEiJ_P0077925 Itpr1 protein_coding protein_coding MGP_WSBEiJ_T0077926.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109641339 109982493 + MGP_WSBEiJ_P0077926 Itpr1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0077927.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109641441 109982485 + MGP_WSBEiJ_P0077927 Itpr1 protein_coding protein_coding MGP_WSBEiJ_T0077928.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109683357 109818818 + Itpr1 protein_coding retained_intron MGP_WSBEiJ_T0077929.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109781932 109803352 + MGP_WSBEiJ_P0077929 Itpr1 protein_coding protein_coding MGP_WSBEiJ_T0077930.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109841035 109844807 + Itpr1 protein_coding retained_intron MGP_WSBEiJ_T0077931.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109842577 109868057 + MGP_WSBEiJ_P0077931 Itpr1 protein_coding protein_coding MGP_WSBEiJ_T0077932.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109842644 109900915 + MGP_WSBEiJ_P0077932 Itpr1 protein_coding protein_coding MGP_WSBEiJ_T0077933.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109843658 109868012 + MGP_WSBEiJ_P0077933 Itpr1 protein_coding protein_coding MGP_WSBEiJ_T0077934.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109886060 109898393 + Itpr1 protein_coding processed_transcript MGP_WSBEiJ_T0077935.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109938670 109943276 + Itpr1 protein_coding retained_intron MGP_WSBEiJ_T0077936.1 MGP_WSBEiJ_G0030271.1 mouse_genomes_project 6 109949052 109949993 + Itpr1 protein_coding retained_intron MGP_WSBEiJ_T0076376.1 MGP_WSBEiJ_G0029930.1 mouse_genomes_project 6 52357872 52363240 - MGP_WSBEiJ_P0076376 Tril protein_coding protein_coding MGP_WSBEiJ_T0004892.1 MGP_WSBEiJ_G0004195.1 mouse_genomes_project 6 66528793 66529636 - antisense antisense MGP_WSBEiJ_T0008513.1 MGP_WSBEiJ_G0006887.1 mouse_genomes_project 6 84685894 84748052 + Gm44127 lincRNA lincRNA MGP_WSBEiJ_T0076403.1 MGP_WSBEiJ_G0029935.1 mouse_genomes_project 6 53081840 53089989 - MGP_WSBEiJ_P0076403 Scrn1 protein_coding protein_coding MGP_WSBEiJ_T0076404.1 MGP_WSBEiJ_G0029935.1 mouse_genomes_project 6 53086527 53157778 - MGP_WSBEiJ_P0076404 Scrn1 protein_coding protein_coding MGP_WSBEiJ_T0076405.1 MGP_WSBEiJ_G0029935.1 mouse_genomes_project 6 53086902 53101857 - MGP_WSBEiJ_P0076405 Scrn1 protein_coding protein_coding MGP_WSBEiJ_T0076406.1 MGP_WSBEiJ_G0029935.1 mouse_genomes_project 6 53089735 53095436 - Scrn1 protein_coding retained_intron MGP_WSBEiJ_T0076407.1 MGP_WSBEiJ_G0029935.1 mouse_genomes_project 6 53120759 53145764 - MGP_WSBEiJ_P0076407 Scrn1 protein_coding protein_coding MGP_WSBEiJ_T0076408.1 MGP_WSBEiJ_G0029935.1 mouse_genomes_project 6 53143026 53145755 - Scrn1 protein_coding processed_transcript MGP_WSBEiJ_T0077401.1 MGP_WSBEiJ_G0030161.1 mouse_genomes_project 6 88115502 88125422 + MGP_WSBEiJ_P0077401 Bmp10 protein_coding protein_coding MGP_WSBEiJ_T0076045.1 MGP_WSBEiJ_G0029854.1 mouse_genomes_project 6 41358088 41686495 - MGP_WSBEiJ_P0076045 Tpk1 protein_coding protein_coding MGP_WSBEiJ_T0076046.1 MGP_WSBEiJ_G0029854.1 mouse_genomes_project 6 41358160 41649387 - Tpk1 protein_coding processed_transcript MGP_WSBEiJ_T0076047.1 MGP_WSBEiJ_G0029854.1 mouse_genomes_project 6 41358360 41686392 - MGP_WSBEiJ_P0076047 Tpk1 protein_coding protein_coding MGP_WSBEiJ_T0076048.1 MGP_WSBEiJ_G0029854.1 mouse_genomes_project 6 41359928 41495792 - Tpk1 protein_coding processed_transcript MGP_WSBEiJ_T0076049.1 MGP_WSBEiJ_G0029854.1 mouse_genomes_project 6 41615457 41686436 - Tpk1 protein_coding processed_transcript MGP_WSBEiJ_T0076050.1 MGP_WSBEiJ_G0029854.1 mouse_genomes_project 6 41616935 41686098 - Tpk1 protein_coding processed_transcript MGP_WSBEiJ_T0002012.1 MGP_WSBEiJ_G0001932.1 mouse_genomes_project 6 87638678 87642497 + TEC TEC MGP_WSBEiJ_T0008382.1 MGP_WSBEiJ_G0006794.1 mouse_genomes_project 6 13995560 14001755 - Gm15473 lincRNA lincRNA MGP_WSBEiJ_T0000288.1 MGP_WSBEiJ_G0000236.1 mouse_genomes_project 6 68603938 68604586 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0077338.1 MGP_WSBEiJ_G0030147.1 mouse_genomes_project 6 87171485 87173315 - MGP_WSBEiJ_P0077338 Pcbp1 protein_coding protein_coding MGP_WSBEiJ_T0004928.1 MGP_WSBEiJ_G0004218.1 mouse_genomes_project 6 87112396 87122889 - A430078I02Rik antisense antisense MGP_WSBEiJ_T0004929.1 MGP_WSBEiJ_G0004218.1 mouse_genomes_project 6 87112924 87122949 - A430078I02Rik antisense antisense MGP_WSBEiJ_T0075036.1 MGP_WSBEiJ_G0029625.1 mouse_genomes_project 6 5325678 5411990 + MGP_WSBEiJ_P0075036 Glcci1 protein_coding protein_coding MGP_WSBEiJ_T0075037.1 MGP_WSBEiJ_G0029625.1 mouse_genomes_project 6 5327018 5393173 + MGP_WSBEiJ_P0075037 Glcci1 protein_coding protein_coding MGP_WSBEiJ_T0075038.1 MGP_WSBEiJ_G0029625.1 mouse_genomes_project 6 5336577 5408060 + MGP_WSBEiJ_P0075038 Glcci1 protein_coding protein_coding MGP_WSBEiJ_T0075039.1 MGP_WSBEiJ_G0029625.1 mouse_genomes_project 6 5355758 5408510 + MGP_WSBEiJ_P0075039 Glcci1 protein_coding protein_coding MGP_WSBEiJ_T0075040.1 MGP_WSBEiJ_G0029625.1 mouse_genomes_project 6 5393230 5406069 + Glcci1 protein_coding processed_transcript MGP_WSBEiJ_T0078387.1 MGP_WSBEiJ_G0030354.1 mouse_genomes_project 6 119688315 119734932 - MGP_WSBEiJ_P0078387 Ret protein_coding protein_coding MGP_WSBEiJ_T0078388.1 MGP_WSBEiJ_G0030354.1 mouse_genomes_project 6 119691137 119735517 - MGP_WSBEiJ_P0078388 Ret protein_coding protein_coding MGP_WSBEiJ_T0014955.1 MGP_WSBEiJ_G0013085.1 mouse_genomes_project 6 66920703 66921819 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014919.1 MGP_WSBEiJ_G0013049.1 mouse_genomes_project 6 61564810 61566345 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079178.1 MGP_WSBEiJ_G0030518.1 mouse_genomes_project 6 132082324 132089016 + MGP_WSBEiJ_P0079178 Tmem52b protein_coding protein_coding MGP_WSBEiJ_T0079179.1 MGP_WSBEiJ_G0030518.1 mouse_genomes_project 6 132082382 132087199 + MGP_WSBEiJ_P0079179 Tmem52b protein_coding protein_coding MGP_WSBEiJ_T0079180.1 MGP_WSBEiJ_G0030518.1 mouse_genomes_project 6 132085549 132087230 + Tmem52b protein_coding retained_intron MGP_WSBEiJ_T0079181.1 MGP_WSBEiJ_G0030518.1 mouse_genomes_project 6 132086296 132087280 + Tmem52b protein_coding retained_intron MGP_WSBEiJ_T0078910.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127275460 127294207 + Iffo1 protein_coding retained_intron MGP_WSBEiJ_T0078911.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127275460 127294207 + MGP_WSBEiJ_P0078911 Iffo1 protein_coding protein_coding MGP_WSBEiJ_T0078912.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127275460 127294207 + MGP_WSBEiJ_P0078912 Iffo1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078913.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127275470 127294201 + MGP_WSBEiJ_P0078913 Iffo1 protein_coding protein_coding MGP_WSBEiJ_T0078914.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127275485 127294201 + Iffo1 protein_coding retained_intron MGP_WSBEiJ_T0078915.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127276020 127294201 + MGP_WSBEiJ_P0078915 Iffo1 protein_coding protein_coding MGP_WSBEiJ_T0078916.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127276245 127294201 + Iffo1 protein_coding retained_intron MGP_WSBEiJ_T0078917.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127279226 127281712 + Iffo1 protein_coding processed_transcript MGP_WSBEiJ_T0078918.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127279747 127282955 + Iffo1 protein_coding retained_intron MGP_WSBEiJ_T0078919.1 MGP_WSBEiJ_G0030454.1 mouse_genomes_project 6 127283572 127293482 + Iffo1 protein_coding retained_intron MGP_WSBEiJ_T0077673.1 MGP_WSBEiJ_G0030220.1 mouse_genomes_project 6 92368267 92374975 + MGP_WSBEiJ_P0077673 Lsm3 protein_coding protein_coding MGP_WSBEiJ_T0077674.1 MGP_WSBEiJ_G0030220.1 mouse_genomes_project 6 92368296 92372175 + Lsm3 protein_coding retained_intron MGP_WSBEiJ_T0077675.1 MGP_WSBEiJ_G0030220.1 mouse_genomes_project 6 92368316 92370346 + Lsm3 protein_coding retained_intron MGP_WSBEiJ_T0077676.1 MGP_WSBEiJ_G0030220.1 mouse_genomes_project 6 92368386 92369857 + Lsm3 protein_coding retained_intron MGP_WSBEiJ_T0077677.1 MGP_WSBEiJ_G0030220.1 mouse_genomes_project 6 92368387 92374970 + MGP_WSBEiJ_P0077677 Lsm3 protein_coding protein_coding MGP_WSBEiJ_T0014775.1 MGP_WSBEiJ_G0012905.1 mouse_genomes_project 6 968864 969111 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010621.1 MGP_WSBEiJ_G0008778.1 mouse_genomes_project 6 114881489 114881575 + Gm24387 miRNA miRNA MGP_WSBEiJ_T0004940.1 MGP_WSBEiJ_G0004222.1 mouse_genomes_project 6 88436921 88438106 - Gm44210 antisense antisense MGP_WSBEiJ_T0077702.1 MGP_WSBEiJ_G0030224.1 mouse_genomes_project 6 92776558 92778462 + 4930590J08Rik protein_coding retained_intron MGP_WSBEiJ_T0077703.1 MGP_WSBEiJ_G0030224.1 mouse_genomes_project 6 92777982 92827177 + MGP_WSBEiJ_P0077703 4930590J08Rik protein_coding protein_coding MGP_WSBEiJ_T0077704.1 MGP_WSBEiJ_G0030224.1 mouse_genomes_project 6 92790048 92827091 + MGP_WSBEiJ_P0077704 4930590J08Rik protein_coding protein_coding MGP_WSBEiJ_T0077705.1 MGP_WSBEiJ_G0030224.1 mouse_genomes_project 6 92820715 92826481 + MGP_WSBEiJ_P0077705 4930590J08Rik protein_coding protein_coding MGP_WSBEiJ_T0078633.1 MGP_WSBEiJ_G0030395.1 mouse_genomes_project 6 124320279 124341391 - MGP_WSBEiJ_P0078633 Rimklb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078634.1 MGP_WSBEiJ_G0030395.1 mouse_genomes_project 6 124320281 124325708 - Rimklb protein_coding processed_transcript MGP_WSBEiJ_T0078635.1 MGP_WSBEiJ_G0030395.1 mouse_genomes_project 6 124326076 124362053 - MGP_WSBEiJ_P0078635 Rimklb protein_coding protein_coding MGP_WSBEiJ_T0078636.1 MGP_WSBEiJ_G0030395.1 mouse_genomes_project 6 124327235 124341339 - MGP_WSBEiJ_P0078636 Rimklb protein_coding protein_coding MGP_WSBEiJ_T0078637.1 MGP_WSBEiJ_G0030395.1 mouse_genomes_project 6 124332629 124347361 - Rimklb protein_coding processed_transcript MGP_WSBEiJ_T0078638.1 MGP_WSBEiJ_G0030395.1 mouse_genomes_project 6 124338973 124361987 - MGP_WSBEiJ_P0078638 Rimklb protein_coding protein_coding MGP_WSBEiJ_T0078639.1 MGP_WSBEiJ_G0030395.1 mouse_genomes_project 6 124347344 124374247 - MGP_WSBEiJ_P0078639 Rimklb protein_coding protein_coding MGP_WSBEiJ_T0100929.1 MGP_WSBEiJ_G0039387.1 mouse_genomes_project 6 126098886 126099790 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0075272.1 MGP_WSBEiJ_G0029665.1 mouse_genomes_project 6 21160622 21161522 - MGP_WSBEiJ_P0075272 Tas2r118 protein_coding protein_coding MGP_WSBEiJ_T0000289.1 MGP_WSBEiJ_G0000237.1 mouse_genomes_project 6 68777514 68777829 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0076563.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57824806 57837379 + MGP_WSBEiJ_P0076563 Herc3 protein_coding protein_coding MGP_WSBEiJ_T0076564.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57824844 57837365 + MGP_WSBEiJ_P0076564 Herc3 protein_coding protein_coding MGP_WSBEiJ_T0076565.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57824865 57848541 + MGP_WSBEiJ_P0076565 Herc3 protein_coding protein_coding MGP_WSBEiJ_T0076566.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57825089 57848545 + MGP_WSBEiJ_P0076566 Herc3 protein_coding protein_coding MGP_WSBEiJ_T0076567.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57825202 57900098 + MGP_WSBEiJ_P0076567 Herc3 protein_coding protein_coding MGP_WSBEiJ_T0076568.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57827041 57918261 + MGP_WSBEiJ_P0076568 Herc3 protein_coding protein_coding MGP_WSBEiJ_T0076569.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57857321 57869743 + Herc3 protein_coding retained_intron MGP_WSBEiJ_T0076570.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57870340 57871040 + Herc3 protein_coding processed_transcript MGP_WSBEiJ_T0076571.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57886115 57898562 + MGP_WSBEiJ_P0076571 Herc3 protein_coding protein_coding MGP_WSBEiJ_T0076572.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57897758 57901378 + Herc3 protein_coding retained_intron MGP_WSBEiJ_T0076575.1 MGP_WSBEiJ_G0029990.1 mouse_genomes_project 6 57904130 57914686 + Herc3 protein_coding processed_transcript MGP_WSBEiJ_T0079336.1 MGP_WSBEiJ_G0030580.1 mouse_genomes_project 6 138494659 138535740 + MGP_WSBEiJ_P0079336 Fam234b protein_coding protein_coding MGP_WSBEiJ_T0079337.1 MGP_WSBEiJ_G0030580.1 mouse_genomes_project 6 138494659 138545538 + MGP_WSBEiJ_P0079337 Fam234b protein_coding protein_coding MGP_WSBEiJ_T0079338.1 MGP_WSBEiJ_G0030580.1 mouse_genomes_project 6 138494791 138507901 + MGP_WSBEiJ_P0079338 Fam234b protein_coding protein_coding MGP_WSBEiJ_T0079339.1 MGP_WSBEiJ_G0030580.1 mouse_genomes_project 6 138495094 138507930 + MGP_WSBEiJ_P0079339 Fam234b protein_coding protein_coding MGP_WSBEiJ_T0079340.1 MGP_WSBEiJ_G0030580.1 mouse_genomes_project 6 138531116 138535736 + Fam234b protein_coding retained_intron MGP_WSBEiJ_T0005002.1 MGP_WSBEiJ_G0004267.1 mouse_genomes_project 6 127027230 127039918 + A230083G16Rik antisense antisense MGP_WSBEiJ_T0015140.1 MGP_WSBEiJ_G0013270.1 mouse_genomes_project 6 132121331 132121773 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100924.1 MGP_WSBEiJ_G0039382.1 mouse_genomes_project 6 90662264 90663206 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0076583.1 MGP_WSBEiJ_G0029995.1 mouse_genomes_project 6 59661662 59662039 - MGP_WSBEiJ_P0076583 Gm8797 protein_coding protein_coding MGP_WSBEiJ_T0011419.1 MGP_WSBEiJ_G0009576.1 mouse_genomes_project 6 3629752 3629932 + Gm27699 misc_RNA misc_RNA MGP_WSBEiJ_T0098408.1 MGP_WSBEiJ_G0037071.1 mouse_genomes_project 6 27343691 27343798 + Gm24536 snRNA snRNA MGP_WSBEiJ_T0014892.1 MGP_WSBEiJ_G0013022.1 mouse_genomes_project 6 49347462 49347700 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008604.1 MGP_WSBEiJ_G0006960.1 mouse_genomes_project 6 134872832 134873542 - Gm43974 lincRNA lincRNA MGP_WSBEiJ_T0075491.1 MGP_WSBEiJ_G0029708.1 mouse_genomes_project 6 27616925 27648513 - Ube2h protein_coding processed_transcript MGP_WSBEiJ_T0075492.1 MGP_WSBEiJ_G0029708.1 mouse_genomes_project 6 27616977 27715857 - MGP_WSBEiJ_P0075492 Ube2h protein_coding protein_coding MGP_WSBEiJ_T0075493.1 MGP_WSBEiJ_G0029708.1 mouse_genomes_project 6 27617481 27675354 - MGP_WSBEiJ_P0075493 Ube2h protein_coding unknown_likely_coding MGP_WSBEiJ_T0075494.1 MGP_WSBEiJ_G0029708.1 mouse_genomes_project 6 27625033 27715863 - Ube2h protein_coding processed_transcript MGP_WSBEiJ_T0077504.1 MGP_WSBEiJ_G0030182.1 mouse_genomes_project 6 89463631 89465203 + Mgll protein_coding processed_transcript MGP_WSBEiJ_T0077505.1 MGP_WSBEiJ_G0030182.1 mouse_genomes_project 6 89463642 89564393 + MGP_WSBEiJ_P0077505 Mgll protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077506.1 MGP_WSBEiJ_G0030182.1 mouse_genomes_project 6 89463655 89566991 + MGP_WSBEiJ_P0077506 Mgll protein_coding protein_coding MGP_WSBEiJ_T0077507.1 MGP_WSBEiJ_G0030182.1 mouse_genomes_project 6 89463757 89505765 + MGP_WSBEiJ_P0077507 Mgll protein_coding protein_coding MGP_WSBEiJ_T0077508.1 MGP_WSBEiJ_G0030182.1 mouse_genomes_project 6 89464238 89566877 + MGP_WSBEiJ_P0077508 Mgll protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077509.1 MGP_WSBEiJ_G0030182.1 mouse_genomes_project 6 89464312 89569351 + MGP_WSBEiJ_P0077509 Mgll protein_coding protein_coding MGP_WSBEiJ_T0077510.1 MGP_WSBEiJ_G0030182.1 mouse_genomes_project 6 89564139 89566839 + Mgll protein_coding retained_intron MGP_WSBEiJ_T0010612.1 MGP_WSBEiJ_G0008769.1 mouse_genomes_project 6 91497581 91497738 - Gm24816 miRNA miRNA MGP_WSBEiJ_T0078712.1 MGP_WSBEiJ_G0030418.1 mouse_genomes_project 6 126372491 126381869 - MGP_WSBEiJ_P0078712 1700013D24Rik protein_coding protein_coding MGP_WSBEiJ_T0078713.1 MGP_WSBEiJ_G0030418.1 mouse_genomes_project 6 126372496 126381852 - 1700013D24Rik protein_coding lincRNA MGP_WSBEiJ_T0078392.1 MGP_WSBEiJ_G0030356.1 mouse_genomes_project 6 119970922 120000248 - MGP_WSBEiJ_P0078392 Zfp248 protein_coding protein_coding MGP_WSBEiJ_T0078393.1 MGP_WSBEiJ_G0030356.1 mouse_genomes_project 6 119976841 120000570 - Zfp248 protein_coding processed_transcript MGP_WSBEiJ_T0078394.1 MGP_WSBEiJ_G0030356.1 mouse_genomes_project 6 119976919 120000216 - MGP_WSBEiJ_P0078394 Zfp248 protein_coding protein_coding MGP_WSBEiJ_T0078395.1 MGP_WSBEiJ_G0030356.1 mouse_genomes_project 6 119998244 120000653 - Zfp248 protein_coding retained_intron MGP_WSBEiJ_T0078396.1 MGP_WSBEiJ_G0030356.1 mouse_genomes_project 6 119998277 120000622 - Zfp248 protein_coding retained_intron MGP_WSBEiJ_T0078397.1 MGP_WSBEiJ_G0030356.1 mouse_genomes_project 6 119998313 119999902 - Zfp248 protein_coding processed_transcript MGP_WSBEiJ_T0004996.1 MGP_WSBEiJ_G0004261.1 mouse_genomes_project 6 122927858 122930129 - Gm15856 antisense antisense MGP_WSBEiJ_T0078900.1 MGP_WSBEiJ_G0030452.1 mouse_genomes_project 6 127220110 127257791 + MGP_WSBEiJ_P0078900 Chd4 protein_coding protein_coding MGP_WSBEiJ_T0078901.1 MGP_WSBEiJ_G0030452.1 mouse_genomes_project 6 127220110 127257785 + MGP_WSBEiJ_P0078901 Chd4 protein_coding protein_coding MGP_WSBEiJ_T0078902.1 MGP_WSBEiJ_G0030452.1 mouse_genomes_project 6 127221832 127257791 + MGP_WSBEiJ_P0078902 Chd4 protein_coding protein_coding MGP_WSBEiJ_T0078903.1 MGP_WSBEiJ_G0030452.1 mouse_genomes_project 6 127221847 127223037 + Chd4 protein_coding retained_intron MGP_WSBEiJ_T0078904.1 MGP_WSBEiJ_G0030452.1 mouse_genomes_project 6 127222234 127226184 + MGP_WSBEiJ_P0078904 Chd4 protein_coding protein_coding MGP_WSBEiJ_T0078905.1 MGP_WSBEiJ_G0030452.1 mouse_genomes_project 6 127238567 127239648 + Chd4 protein_coding retained_intron MGP_WSBEiJ_T0078906.1 MGP_WSBEiJ_G0030452.1 mouse_genomes_project 6 127238595 127249139 + MGP_WSBEiJ_P0078906 Chd4 protein_coding protein_coding MGP_WSBEiJ_T0078907.1 MGP_WSBEiJ_G0030452.1 mouse_genomes_project 6 127246967 127248062 + Chd4 protein_coding retained_intron MGP_WSBEiJ_T0097443.1 MGP_WSBEiJ_G0036113.1 mouse_genomes_project 6 87656122 87656770 + Gm44091 sense_intronic sense_intronic MGP_WSBEiJ_T0075245.1 MGP_WSBEiJ_G0029659.1 mouse_genomes_project 6 20044010 20231199 + MGP_WSBEiJ_P0075245 Ptprz1 protein_coding protein_coding MGP_WSBEiJ_T0075246.1 MGP_WSBEiJ_G0029659.1 mouse_genomes_project 6 20044232 20177291 + MGP_WSBEiJ_P0075246 Ptprz1 protein_coding protein_coding MGP_WSBEiJ_T0075247.1 MGP_WSBEiJ_G0029659.1 mouse_genomes_project 6 20044287 20230900 + MGP_WSBEiJ_P0075247 Ptprz1 protein_coding protein_coding MGP_WSBEiJ_T0075248.1 MGP_WSBEiJ_G0029659.1 mouse_genomes_project 6 20144919 20145354 + Ptprz1 protein_coding retained_intron MGP_WSBEiJ_T0075249.1 MGP_WSBEiJ_G0029659.1 mouse_genomes_project 6 20158622 20172010 + Ptprz1 protein_coding retained_intron MGP_WSBEiJ_T0075250.1 MGP_WSBEiJ_G0029659.1 mouse_genomes_project 6 20226576 20229812 + Ptprz1 protein_coding retained_intron MGP_WSBEiJ_T0076013.1 MGP_WSBEiJ_G0029837.1 mouse_genomes_project 6 40736742 40737510 + MGP_WSBEiJ_P0076013 Olfr38 protein_coding protein_coding MGP_WSBEiJ_T0015109.1 MGP_WSBEiJ_G0013239.1 mouse_genomes_project 6 124166071 124166310 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004952.1 MGP_WSBEiJ_G0004230.1 mouse_genomes_project 6 90060262 90085036 + Gm26811 antisense antisense MGP_WSBEiJ_T0078513.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 121977530 122020910 - MGP_WSBEiJ_P0078513 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078514.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 121977530 122014252 - MGP_WSBEiJ_P0078514 protein_coding protein_coding MGP_WSBEiJ_T0078515.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 121978242 122014295 - MGP_WSBEiJ_P0078515 protein_coding protein_coding MGP_WSBEiJ_T0078516.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 121987201 122014233 - MGP_WSBEiJ_P0078516 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078517.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 121990176 122014190 - MGP_WSBEiJ_P0078517 protein_coding protein_coding MGP_WSBEiJ_T0078518.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 121990209 122014163 - MGP_WSBEiJ_P0078518 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078519.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 121993168 122014200 - protein_coding retained_intron MGP_WSBEiJ_T0078520.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 122000751 122005859 - protein_coding retained_intron MGP_WSBEiJ_T0078521.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 122005676 122020892 - MGP_WSBEiJ_P0078521 protein_coding protein_coding MGP_WSBEiJ_T0078522.1 MGP_WSBEiJ_G0030372.1 mouse_genomes_project 6 122009648 122014190 - protein_coding retained_intron MGP_WSBEiJ_T0077445.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88598434 88624090 + MGP_WSBEiJ_P0077445 Copg1 protein_coding protein_coding MGP_WSBEiJ_T0077446.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88598548 88601380 + MGP_WSBEiJ_P0077446 Copg1 protein_coding protein_coding MGP_WSBEiJ_T0077447.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88598560 88604417 + Copg1 protein_coding processed_transcript MGP_WSBEiJ_T0077448.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88598577 88605585 + Copg1 protein_coding retained_intron MGP_WSBEiJ_T0077449.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88604552 88613067 + Copg1 protein_coding retained_intron MGP_WSBEiJ_T0077450.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88605738 88606733 + Copg1 protein_coding retained_intron MGP_WSBEiJ_T0077451.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88606078 88615580 + Copg1 protein_coding retained_intron MGP_WSBEiJ_T0077452.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88606627 88623025 + Copg1 protein_coding retained_intron MGP_WSBEiJ_T0077453.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88608522 88613479 + Copg1 protein_coding retained_intron MGP_WSBEiJ_T0077454.1 MGP_WSBEiJ_G0030171.1 mouse_genomes_project 6 88619271 88620554 + Copg1 protein_coding processed_transcript MGP_WSBEiJ_T0010574.1 MGP_WSBEiJ_G0008731.1 mouse_genomes_project 6 12307137 12307248 + Gm25470 miRNA miRNA MGP_WSBEiJ_T0008621.1 MGP_WSBEiJ_G0006971.1 mouse_genomes_project 6 145541705 145550864 + Gm44244 lincRNA lincRNA MGP_WSBEiJ_T0004989.1 MGP_WSBEiJ_G0004254.1 mouse_genomes_project 6 116862726 116876911 - Gm44079 antisense antisense MGP_WSBEiJ_T0077570.1 MGP_WSBEiJ_G0030189.1 mouse_genomes_project 6 90140397 90353667 - MGP_WSBEiJ_P0077570 Chchd6 protein_coding protein_coding MGP_WSBEiJ_T0077571.1 MGP_WSBEiJ_G0030189.1 mouse_genomes_project 6 90140402 90353667 - MGP_WSBEiJ_P0077571 Chchd6 protein_coding protein_coding MGP_WSBEiJ_T0077572.1 MGP_WSBEiJ_G0030189.1 mouse_genomes_project 6 90175272 90353619 - Chchd6 protein_coding retained_intron MGP_WSBEiJ_T0077573.1 MGP_WSBEiJ_G0030189.1 mouse_genomes_project 6 90327561 90353626 - MGP_WSBEiJ_P0077573 Chchd6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014873.1 MGP_WSBEiJ_G0013003.1 mouse_genomes_project 6 46918758 46919216 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005033.1 MGP_WSBEiJ_G0004292.1 mouse_genomes_project 6 141957172 141976046 + Gm30332 antisense antisense MGP_WSBEiJ_T0005012.1 MGP_WSBEiJ_G0004275.1 mouse_genomes_project 6 130048177 130049531 + Gm42738 antisense antisense MGP_WSBEiJ_T0002013.1 MGP_WSBEiJ_G0001933.1 mouse_genomes_project 6 87833756 87835864 - TEC TEC MGP_WSBEiJ_T0078109.1 MGP_WSBEiJ_G0030302.1 mouse_genomes_project 6 115066008 115069956 - MGP_WSBEiJ_P0078109 Fancd2os protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078110.1 MGP_WSBEiJ_G0030302.1 mouse_genomes_project 6 115066009 115069956 - MGP_WSBEiJ_P0078110 Fancd2os protein_coding protein_coding MGP_WSBEiJ_T0014944.1 MGP_WSBEiJ_G0013074.1 mouse_genomes_project 6 65850181 65852096 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001951.1 MGP_WSBEiJ_G0001871.1 mouse_genomes_project 6 55484930 55486528 + TEC TEC MGP_WSBEiJ_T0096838.1 MGP_WSBEiJ_G0035519.1 mouse_genomes_project 6 70207631 70207861 + pseudogene pseudogene MGP_WSBEiJ_T0014990.1 MGP_WSBEiJ_G0013120.1 mouse_genomes_project 6 79806423 79807183 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008430.1 MGP_WSBEiJ_G0006827.1 mouse_genomes_project 6 33210690 33215270 - Gm42931 lincRNA lincRNA MGP_WSBEiJ_T0075872.1 MGP_WSBEiJ_G0029780.1 mouse_genomes_project 6 38239645 38276808 - MGP_WSBEiJ_P0075872 E330009J07Rik protein_coding protein_coding MGP_WSBEiJ_T0075873.1 MGP_WSBEiJ_G0029780.1 mouse_genomes_project 6 38245770 38276806 - MGP_WSBEiJ_P0075873 E330009J07Rik protein_coding protein_coding MGP_WSBEiJ_T0075874.1 MGP_WSBEiJ_G0029780.1 mouse_genomes_project 6 38257600 38271105 - MGP_WSBEiJ_P0075874 E330009J07Rik protein_coding protein_coding MGP_WSBEiJ_T0075875.1 MGP_WSBEiJ_G0029780.1 mouse_genomes_project 6 38262511 38276788 - E330009J07Rik protein_coding retained_intron MGP_WSBEiJ_T0100305.1 MGP_WSBEiJ_G0038805.1 mouse_genomes_project 6 125955866 125975035 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0010586.1 MGP_WSBEiJ_G0008743.1 mouse_genomes_project 6 28486573 28486661 - Mir29a miRNA miRNA MGP_WSBEiJ_T0099673.1 MGP_WSBEiJ_G0038336.1 mouse_genomes_project 6 101734968 101735102 - Gm23234 snoRNA snoRNA MGP_WSBEiJ_T0078847.1 MGP_WSBEiJ_G0030444.1 mouse_genomes_project 6 127024044 127028314 - MGP_WSBEiJ_P0078847 Ptms protein_coding protein_coding MGP_WSBEiJ_T0078848.1 MGP_WSBEiJ_G0030444.1 mouse_genomes_project 6 127024051 127025041 - Ptms protein_coding processed_transcript MGP_WSBEiJ_T0078849.1 MGP_WSBEiJ_G0030444.1 mouse_genomes_project 6 127024127 127030462 - Ptms protein_coding processed_transcript MGP_WSBEiJ_T0078850.1 MGP_WSBEiJ_G0030444.1 mouse_genomes_project 6 127024412 127025591 - Ptms protein_coding retained_intron MGP_WSBEiJ_T0078851.1 MGP_WSBEiJ_G0030444.1 mouse_genomes_project 6 127025007 127025896 - Ptms protein_coding processed_transcript MGP_WSBEiJ_T0100910.1 MGP_WSBEiJ_G0039368.1 mouse_genomes_project 6 57373348 57374263 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0076313.1 MGP_WSBEiJ_G0029913.1 mouse_genomes_project 6 50645157 50647572 - MGP_WSBEiJ_P0076313 Hoxa2 protein_coding protein_coding MGP_WSBEiJ_T0015169.1 MGP_WSBEiJ_G0013299.1 mouse_genomes_project 6 138463670 138464576 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008587.1 MGP_WSBEiJ_G0006948.1 mouse_genomes_project 6 126398328 126400972 + Gm44006 lincRNA lincRNA MGP_WSBEiJ_T0100306.1 MGP_WSBEiJ_G0038806.1 mouse_genomes_project 6 131498211 131543910 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0074928.1 MGP_WSBEiJ_G0029601.1 mouse_genomes_project 6 1213187 1225246 + MGP_WSBEiJ_P0074928 Col1a2 protein_coding protein_coding MGP_WSBEiJ_T0074929.1 MGP_WSBEiJ_G0029601.1 mouse_genomes_project 6 1213760 1250337 + MGP_WSBEiJ_P0074929 Col1a2 protein_coding protein_coding MGP_WSBEiJ_T0074930.1 MGP_WSBEiJ_G0029601.1 mouse_genomes_project 6 1213969 1223838 + Col1a2 protein_coding retained_intron MGP_WSBEiJ_T0074931.1 MGP_WSBEiJ_G0029601.1 mouse_genomes_project 6 1213969 1223351 + Col1a2 protein_coding retained_intron MGP_WSBEiJ_T0074932.1 MGP_WSBEiJ_G0029601.1 mouse_genomes_project 6 1229432 1238254 + Col1a2 protein_coding retained_intron MGP_WSBEiJ_T0074933.1 MGP_WSBEiJ_G0029601.1 mouse_genomes_project 6 1238958 1244684 + Col1a2 protein_coding retained_intron MGP_WSBEiJ_T0074934.1 MGP_WSBEiJ_G0029601.1 mouse_genomes_project 6 1244579 1245422 + Col1a2 protein_coding retained_intron MGP_WSBEiJ_T0074935.1 MGP_WSBEiJ_G0029601.1 mouse_genomes_project 6 1246287 1246789 + Col1a2 protein_coding retained_intron MGP_WSBEiJ_T0077779.1 MGP_WSBEiJ_G0030243.1 mouse_genomes_project 6 98143347 98183199 - MGP_WSBEiJ_P0077779 Eogt protein_coding protein_coding MGP_WSBEiJ_T0077780.1 MGP_WSBEiJ_G0030243.1 mouse_genomes_project 6 98145313 98182900 - Eogt protein_coding processed_transcript MGP_WSBEiJ_T0077781.1 MGP_WSBEiJ_G0030243.1 mouse_genomes_project 6 98145342 98182944 - MGP_WSBEiJ_P0077781 Eogt protein_coding protein_coding MGP_WSBEiJ_T0077782.1 MGP_WSBEiJ_G0030243.1 mouse_genomes_project 6 98145527 98151990 - Eogt protein_coding processed_transcript MGP_WSBEiJ_T0077783.1 MGP_WSBEiJ_G0030243.1 mouse_genomes_project 6 98170514 98181801 - MGP_WSBEiJ_P0077783 Eogt protein_coding protein_coding MGP_WSBEiJ_T0077784.1 MGP_WSBEiJ_G0030243.1 mouse_genomes_project 6 98177996 98181811 - MGP_WSBEiJ_P0077784 Eogt protein_coding protein_coding MGP_WSBEiJ_T0077785.1 MGP_WSBEiJ_G0030243.1 mouse_genomes_project 6 98179286 98182877 - MGP_WSBEiJ_P0077785 Eogt protein_coding protein_coding MGP_WSBEiJ_T0077786.1 MGP_WSBEiJ_G0030243.1 mouse_genomes_project 6 98179340 98182941 - MGP_WSBEiJ_P0077786 Eogt protein_coding protein_coding MGP_WSBEiJ_T0079125.1 MGP_WSBEiJ_G0030502.1 mouse_genomes_project 6 131112896 131116125 - Klrb1 protein_coding processed_transcript MGP_WSBEiJ_T0079126.1 MGP_WSBEiJ_G0030502.1 mouse_genomes_project 6 131113502 131132475 - MGP_WSBEiJ_P0079126 Klrb1 protein_coding protein_coding MGP_WSBEiJ_T0004910.1 MGP_WSBEiJ_G0004207.1 mouse_genomes_project 6 83496362 83498245 + Gm44287 antisense antisense MGP_WSBEiJ_T0014913.1 MGP_WSBEiJ_G0013043.1 mouse_genomes_project 6 59661841 59662023 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001979.1 MGP_WSBEiJ_G0001899.1 mouse_genomes_project 6 77571471 77573661 - TEC TEC MGP_WSBEiJ_T0015024.1 MGP_WSBEiJ_G0013154.1 mouse_genomes_project 6 95299735 95300499 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002143.1 MGP_WSBEiJ_G0002062.1 mouse_genomes_project 6 152220660 152226108 - TEC TEC MGP_WSBEiJ_T0097453.1 MGP_WSBEiJ_G0036123.1 mouse_genomes_project 6 140894319 140894626 + Gm44258 sense_intronic sense_intronic MGP_WSBEiJ_T0014938.1 MGP_WSBEiJ_G0013068.1 mouse_genomes_project 6 65177641 65178207 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008460.1 MGP_WSBEiJ_G0006845.1 mouse_genomes_project 6 49781171 49796383 + Gm6559 lincRNA lincRNA MGP_WSBEiJ_T0076206.1 MGP_WSBEiJ_G0029890.1 mouse_genomes_project 6 47138265 47171811 + MGP_WSBEiJ_P0076206 Aoc1 protein_coding protein_coding MGP_WSBEiJ_T0076207.1 MGP_WSBEiJ_G0029890.1 mouse_genomes_project 6 47160966 47175123 + MGP_WSBEiJ_P0076207 Aoc1 protein_coding protein_coding MGP_WSBEiJ_T0076208.1 MGP_WSBEiJ_G0029890.1 mouse_genomes_project 6 47170920 47175122 + MGP_WSBEiJ_P0076208 Aoc1 protein_coding protein_coding MGP_WSBEiJ_T0076209.1 MGP_WSBEiJ_G0029890.1 mouse_genomes_project 6 47170920 47175122 + MGP_WSBEiJ_P0076209 Aoc1 protein_coding protein_coding MGP_WSBEiJ_T0076210.1 MGP_WSBEiJ_G0029890.1 mouse_genomes_project 6 47173289 47174586 + Aoc1 protein_coding retained_intron MGP_WSBEiJ_T0079148.1 MGP_WSBEiJ_G0030509.1 mouse_genomes_project 6 131615777 131625721 - MGP_WSBEiJ_P0079148 Clec2e protein_coding protein_coding MGP_WSBEiJ_T0002062.1 MGP_WSBEiJ_G0001982.1 mouse_genomes_project 6 102562431 102565116 - TEC TEC MGP_WSBEiJ_T0008597.1 MGP_WSBEiJ_G0006958.1 mouse_genomes_project 6 131295894 131305540 + lincRNA lincRNA MGP_WSBEiJ_T0004852.1 MGP_WSBEiJ_G0004164.1 mouse_genomes_project 6 34557328 34606929 + 1700111E14Rik antisense antisense MGP_WSBEiJ_T0077371.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87688824 87709620 + MGP_WSBEiJ_P0077371 Nfu1 protein_coding protein_coding MGP_WSBEiJ_T0077372.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87689424 87695346 + Nfu1 protein_coding retained_intron MGP_WSBEiJ_T0077373.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87689424 87709613 + MGP_WSBEiJ_P0077373 Nfu1 protein_coding protein_coding MGP_WSBEiJ_T0077374.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87689424 87709618 + MGP_WSBEiJ_P0077374 Nfu1 protein_coding protein_coding MGP_WSBEiJ_T0077375.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87689468 87691977 + Nfu1 protein_coding retained_intron MGP_WSBEiJ_T0077376.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87689477 87693078 + Nfu1 protein_coding retained_intron MGP_WSBEiJ_T0077377.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87689477 87703828 + MGP_WSBEiJ_P0077377 Nfu1 protein_coding protein_coding MGP_WSBEiJ_T0077378.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87689591 87706183 + Nfu1 protein_coding processed_transcript MGP_WSBEiJ_T0077379.1 MGP_WSBEiJ_G0030154.1 mouse_genomes_project 6 87705636 87709620 + Nfu1 protein_coding retained_intron MGP_WSBEiJ_T0077246.1 MGP_WSBEiJ_G0030131.1 mouse_genomes_project 6 86400533 86404280 - MGP_WSBEiJ_P0077246 Nat8f5 protein_coding protein_coding MGP_WSBEiJ_T0002667.1 MGP_WSBEiJ_G0002551.1 mouse_genomes_project 6 38942392 38942794 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0075019.1 MGP_WSBEiJ_G0029619.1 mouse_genomes_project 6 4633045 4663603 + MGP_WSBEiJ_P0075019 C1galt1 protein_coding protein_coding MGP_WSBEiJ_T0075027.1 MGP_WSBEiJ_G0029623.1 mouse_genomes_project 6 5062917 5271123 + MGP_WSBEiJ_P0075027 Umad1 protein_coding protein_coding MGP_WSBEiJ_T0075028.1 MGP_WSBEiJ_G0029623.1 mouse_genomes_project 6 5062979 5234313 + MGP_WSBEiJ_P0075028 Umad1 protein_coding protein_coding MGP_WSBEiJ_T0075029.1 MGP_WSBEiJ_G0029623.1 mouse_genomes_project 6 5063011 5235938 + MGP_WSBEiJ_P0075029 Umad1 protein_coding protein_coding MGP_WSBEiJ_T0075030.1 MGP_WSBEiJ_G0029623.1 mouse_genomes_project 6 5063057 5234454 + MGP_WSBEiJ_P0075030 Umad1 protein_coding protein_coding MGP_WSBEiJ_T0075031.1 MGP_WSBEiJ_G0029623.1 mouse_genomes_project 6 5063059 5235935 + MGP_WSBEiJ_P0075031 Umad1 protein_coding protein_coding MGP_WSBEiJ_T0075032.1 MGP_WSBEiJ_G0029623.1 mouse_genomes_project 6 5063073 5082999 + Umad1 protein_coding processed_transcript MGP_WSBEiJ_T0075034.1 MGP_WSBEiJ_G0029623.1 mouse_genomes_project 6 5074139 5235941 + MGP_WSBEiJ_P0075034 Umad1 protein_coding protein_coding MGP_WSBEiJ_T0075035.1 MGP_WSBEiJ_G0029623.1 mouse_genomes_project 6 5226842 5235412 + Umad1 protein_coding processed_transcript MGP_WSBEiJ_T0014893.1 MGP_WSBEiJ_G0013023.1 mouse_genomes_project 6 50595637 50596287 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002004.1 MGP_WSBEiJ_G0001924.1 mouse_genomes_project 6 86652301 86653954 + TEC TEC MGP_WSBEiJ_T0077074.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83736991 83745957 + MGP_WSBEiJ_P0077074 Bola3 protein_coding protein_coding MGP_WSBEiJ_T0077075.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83737060 83745932 + MGP_WSBEiJ_P0077075 Bola3 protein_coding protein_coding MGP_WSBEiJ_T0077076.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83737290 83747694 + MGP_WSBEiJ_P0077076 Bola3 protein_coding protein_coding MGP_WSBEiJ_T0077077.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83737335 83738245 + Bola3 protein_coding processed_transcript MGP_WSBEiJ_T0077078.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83737364 83741043 + Bola3 protein_coding retained_intron MGP_WSBEiJ_T0077079.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83738884 83741054 + Bola3 protein_coding retained_intron MGP_WSBEiJ_T0077080.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83738884 83745977 + Bola3 protein_coding retained_intron MGP_WSBEiJ_T0077081.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83739939 83745894 + Bola3 protein_coding processed_transcript MGP_WSBEiJ_T0077082.1 MGP_WSBEiJ_G0030099.1 mouse_genomes_project 6 83741158 83746805 + Bola3 protein_coding processed_transcript MGP_WSBEiJ_T0017632.1 MGP_WSBEiJ_G0015044.1 mouse_genomes_project 6 5303169 5326222 - A430035B10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017633.1 MGP_WSBEiJ_G0015044.1 mouse_genomes_project 6 5304310 5312533 - A430035B10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017634.1 MGP_WSBEiJ_G0015044.1 mouse_genomes_project 6 5305477 5323632 - A430035B10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017635.1 MGP_WSBEiJ_G0015044.1 mouse_genomes_project 6 5306863 5323575 - A430035B10Rik processed_transcript retained_intron MGP_WSBEiJ_T0017636.1 MGP_WSBEiJ_G0015044.1 mouse_genomes_project 6 5321612 5323692 - A430035B10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0014876.1 MGP_WSBEiJ_G0013006.1 mouse_genomes_project 6 47227363 47227847 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079212.1 MGP_WSBEiJ_G0030530.1 mouse_genomes_project 6 134125541 134153818 - MGP_WSBEiJ_P0079212 Klra2 protein_coding protein_coding MGP_WSBEiJ_T0079213.1 MGP_WSBEiJ_G0030530.1 mouse_genomes_project 6 134127879 134153818 - MGP_WSBEiJ_P0079213 Klra2 protein_coding protein_coding MGP_WSBEiJ_T0077046.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83542626 83577922 + MGP_WSBEiJ_P0077046 Dctn1 protein_coding protein_coding MGP_WSBEiJ_T0077047.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83542657 83577923 + MGP_WSBEiJ_P0077047 Dctn1 protein_coding protein_coding MGP_WSBEiJ_T0077048.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83542710 83567360 + MGP_WSBEiJ_P0077048 Dctn1 protein_coding protein_coding MGP_WSBEiJ_T0077049.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83557357 83577776 + MGP_WSBEiJ_P0077049 Dctn1 protein_coding protein_coding MGP_WSBEiJ_T0077050.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83557360 83577922 + MGP_WSBEiJ_P0077050 Dctn1 protein_coding protein_coding MGP_WSBEiJ_T0077051.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83557384 83566931 + MGP_WSBEiJ_P0077051 Dctn1 protein_coding protein_coding MGP_WSBEiJ_T0077052.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83563722 83577923 + MGP_WSBEiJ_P0077052 Dctn1 protein_coding protein_coding MGP_WSBEiJ_T0077053.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83566388 83567385 + Dctn1 protein_coding retained_intron MGP_WSBEiJ_T0077054.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83572130 83573375 + Dctn1 protein_coding retained_intron MGP_WSBEiJ_T0077055.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83572329 83573074 + Dctn1 protein_coding retained_intron MGP_WSBEiJ_T0077056.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83572888 83573863 + Dctn1 protein_coding retained_intron MGP_WSBEiJ_T0077057.1 MGP_WSBEiJ_G0030095.1 mouse_genomes_project 6 83574808 83576411 + Dctn1 protein_coding retained_intron MGP_WSBEiJ_T0015198.1 MGP_WSBEiJ_G0013328.1 mouse_genomes_project 6 153315944 153316394 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015124.1 MGP_WSBEiJ_G0013254.1 mouse_genomes_project 6 128545333 128545746 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076513.1 MGP_WSBEiJ_G0029968.1 mouse_genomes_project 6 56010138 56011038 + MGP_WSBEiJ_P0076513 Vmn1r15 protein_coding protein_coding MGP_WSBEiJ_T0075720.1 MGP_WSBEiJ_G0029746.1 mouse_genomes_project 6 33092403 33131091 - MGP_WSBEiJ_P0075720 Mtpn protein_coding protein_coding MGP_WSBEiJ_T0075721.1 MGP_WSBEiJ_G0029746.1 mouse_genomes_project 6 33110631 33131002 - MGP_WSBEiJ_P0075721 Mtpn protein_coding protein_coding MGP_WSBEiJ_T0010645.1 MGP_WSBEiJ_G0008802.1 mouse_genomes_project 6 141408896 141409010 - Gm24308 miRNA miRNA MGP_WSBEiJ_T0014788.1 MGP_WSBEiJ_G0012918.1 mouse_genomes_project 6 4428575 4429212 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076868.1 MGP_WSBEiJ_G0030054.1 mouse_genomes_project 6 72624566 72800664 - MGP_WSBEiJ_P0076868 Tcf7l1 protein_coding protein_coding MGP_WSBEiJ_T0076869.1 MGP_WSBEiJ_G0030054.1 mouse_genomes_project 6 72625451 72800362 - MGP_WSBEiJ_P0076869 Tcf7l1 protein_coding protein_coding MGP_WSBEiJ_T0076870.1 MGP_WSBEiJ_G0030054.1 mouse_genomes_project 6 72625770 72628422 - Tcf7l1 protein_coding processed_transcript MGP_WSBEiJ_T0076871.1 MGP_WSBEiJ_G0030054.1 mouse_genomes_project 6 72631127 72800008 - MGP_WSBEiJ_P0076871 Tcf7l1 protein_coding protein_coding MGP_WSBEiJ_T0076872.1 MGP_WSBEiJ_G0030054.1 mouse_genomes_project 6 72654230 72678552 - Tcf7l1 protein_coding processed_transcript MGP_WSBEiJ_T0078972.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127711025 127756238 + MGP_WSBEiJ_P0078972 Vwf protein_coding protein_coding MGP_WSBEiJ_T0078973.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127717628 127851947 + MGP_WSBEiJ_P0078973 Vwf protein_coding protein_coding MGP_WSBEiJ_T0078974.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127717643 127768903 + Vwf protein_coding retained_intron MGP_WSBEiJ_T0078975.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127717643 127756537 + MGP_WSBEiJ_P0078975 Vwf protein_coding protein_coding MGP_WSBEiJ_T0078976.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127731070 127742704 + Vwf protein_coding processed_transcript MGP_WSBEiJ_T0078977.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127767676 127807645 + Vwf protein_coding processed_transcript MGP_WSBEiJ_T0078978.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127798586 127800927 + Vwf protein_coding retained_intron MGP_WSBEiJ_T0078979.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127811063 127826714 + Vwf protein_coding retained_intron MGP_WSBEiJ_T0078980.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127813996 127851940 + MGP_WSBEiJ_P0078980 Vwf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078981.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127819665 127821363 + Vwf protein_coding retained_intron MGP_WSBEiJ_T0078982.1 MGP_WSBEiJ_G0030467.1 mouse_genomes_project 6 127851004 127851903 + Vwf protein_coding processed_transcript MGP_WSBEiJ_T0017721.1 MGP_WSBEiJ_G0015072.1 mouse_genomes_project 6 146489616 146510004 + Gm7457 processed_transcript antisense MGP_WSBEiJ_T0017722.1 MGP_WSBEiJ_G0015072.1 mouse_genomes_project 6 146489769 146492320 + Gm7457 processed_transcript retained_intron MGP_WSBEiJ_T0002142.1 MGP_WSBEiJ_G0002061.1 mouse_genomes_project 6 152192859 152196371 - TEC TEC MGP_WSBEiJ_T0001945.1 MGP_WSBEiJ_G0001865.1 mouse_genomes_project 6 51064574 51067257 + TEC TEC MGP_WSBEiJ_T0014933.1 MGP_WSBEiJ_G0013063.1 mouse_genomes_project 6 64555459 64555861 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008652.1 MGP_WSBEiJ_G0006994.1 mouse_genomes_project 6 153491870 153492742 + lincRNA lincRNA MGP_WSBEiJ_T0002107.1 MGP_WSBEiJ_G0002026.1 mouse_genomes_project 6 131571180 131571377 - TEC TEC MGP_WSBEiJ_T0079675.1 MGP_WSBEiJ_G0030644.1 mouse_genomes_project 6 148983429 149016977 - MGP_WSBEiJ_P0079675 Kras protein_coding protein_coding MGP_WSBEiJ_T0079676.1 MGP_WSBEiJ_G0030644.1 mouse_genomes_project 6 148986732 148997585 - Kras protein_coding processed_transcript MGP_WSBEiJ_T0079677.1 MGP_WSBEiJ_G0030644.1 mouse_genomes_project 6 148986977 149016977 - MGP_WSBEiJ_P0079677 Kras protein_coding protein_coding MGP_WSBEiJ_T0079678.1 MGP_WSBEiJ_G0030644.1 mouse_genomes_project 6 148987001 149016915 - MGP_WSBEiJ_P0079678 Kras protein_coding protein_coding MGP_WSBEiJ_T0079679.1 MGP_WSBEiJ_G0030644.1 mouse_genomes_project 6 148987053 149016908 - MGP_WSBEiJ_P0079679 Kras protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079680.1 MGP_WSBEiJ_G0030644.1 mouse_genomes_project 6 148987368 148992315 - Kras protein_coding retained_intron MGP_WSBEiJ_T0079681.1 MGP_WSBEiJ_G0030644.1 mouse_genomes_project 6 149013459 149016940 - MGP_WSBEiJ_P0079681 Kras protein_coding protein_coding MGP_WSBEiJ_T0008540.1 MGP_WSBEiJ_G0006908.1 mouse_genomes_project 6 92288324 92290251 + lincRNA lincRNA MGP_WSBEiJ_T0098452.1 MGP_WSBEiJ_G0037115.1 mouse_genomes_project 6 132663242 132663308 + Gm22555 snRNA snRNA MGP_WSBEiJ_T0001908.1 MGP_WSBEiJ_G0001828.1 mouse_genomes_project 6 31194879 31197007 - TEC TEC MGP_WSBEiJ_T0015163.1 MGP_WSBEiJ_G0013293.1 mouse_genomes_project 6 136257107 136257756 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015035.1 MGP_WSBEiJ_G0013165.1 mouse_genomes_project 6 98975420 98975672 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076142.1 MGP_WSBEiJ_G0029873.1 mouse_genomes_project 6 46842522 46843649 + MGP_WSBEiJ_P0076142 protein_coding protein_coding MGP_WSBEiJ_T0076143.1 MGP_WSBEiJ_G0029873.1 mouse_genomes_project 6 46842665 46843583 + protein_coding retained_intron MGP_WSBEiJ_T0002111.1 MGP_WSBEiJ_G0002030.1 mouse_genomes_project 6 136278997 136280826 + TEC TEC MGP_WSBEiJ_T0014815.1 MGP_WSBEiJ_G0012945.1 mouse_genomes_project 6 16118399 16119708 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100298.1 MGP_WSBEiJ_G0038801.1 mouse_genomes_project 6 62303386 62307085 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100299.1 MGP_WSBEiJ_G0038801.1 mouse_genomes_project 6 62303736 62305148 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0077455.1 MGP_WSBEiJ_G0030172.1 mouse_genomes_project 6 88624429 88651486 + MGP_WSBEiJ_P0077455 Hmces protein_coding protein_coding MGP_WSBEiJ_T0077456.1 MGP_WSBEiJ_G0030172.1 mouse_genomes_project 6 88624444 88647910 + Hmces protein_coding processed_transcript MGP_WSBEiJ_T0077457.1 MGP_WSBEiJ_G0030172.1 mouse_genomes_project 6 88624452 88625498 + Hmces protein_coding processed_transcript MGP_WSBEiJ_T0077458.1 MGP_WSBEiJ_G0030172.1 mouse_genomes_project 6 88624473 88632049 + MGP_WSBEiJ_P0077458 Hmces protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077459.1 MGP_WSBEiJ_G0030172.1 mouse_genomes_project 6 88624800 88651486 + MGP_WSBEiJ_P0077459 Hmces protein_coding protein_coding MGP_WSBEiJ_T0077460.1 MGP_WSBEiJ_G0030172.1 mouse_genomes_project 6 88628416 88648287 + Hmces protein_coding processed_transcript MGP_WSBEiJ_T0077461.1 MGP_WSBEiJ_G0030172.1 mouse_genomes_project 6 88647854 88651386 + Hmces protein_coding retained_intron MGP_WSBEiJ_T0000143.1 MGP_WSBEiJ_G0000108.1 mouse_genomes_project 6 66910916 66911637 + MGP_WSBEiJ_P0000143 Igkv2-137 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000207.1 MGP_WSBEiJ_G0000155.1 mouse_genomes_project 6 70347059 70384977 + MGP_WSBEiJ_P0000207 IG_V_gene IG_V_gene MGP_WSBEiJ_T0078674.1 MGP_WSBEiJ_G0030403.1 mouse_genomes_project 6 124759245 124768254 - MGP_WSBEiJ_P0078674 C3ar1 protein_coding protein_coding MGP_WSBEiJ_T0001905.1 MGP_WSBEiJ_G0001825.1 mouse_genomes_project 6 28721038 28724532 + TEC TEC MGP_WSBEiJ_T0076422.1 MGP_WSBEiJ_G0029940.1 mouse_genomes_project 6 53538546 53592314 - MGP_WSBEiJ_P0076422 Nod1 protein_coding protein_coding MGP_WSBEiJ_T0076423.1 MGP_WSBEiJ_G0029940.1 mouse_genomes_project 6 53538546 53593256 - MGP_WSBEiJ_P0076423 Nod1 protein_coding protein_coding MGP_WSBEiJ_T0076424.1 MGP_WSBEiJ_G0029940.1 mouse_genomes_project 6 53539355 53542704 - Nod1 protein_coding processed_transcript MGP_WSBEiJ_T0076425.1 MGP_WSBEiJ_G0029940.1 mouse_genomes_project 6 53542694 53559999 - MGP_WSBEiJ_P0076425 Nod1 protein_coding protein_coding MGP_WSBEiJ_T0076426.1 MGP_WSBEiJ_G0029940.1 mouse_genomes_project 6 53553897 53556395 - Nod1 protein_coding processed_transcript MGP_WSBEiJ_T0076427.1 MGP_WSBEiJ_G0029940.1 mouse_genomes_project 6 53566021 53585531 - MGP_WSBEiJ_P0076427 Nod1 protein_coding protein_coding MGP_WSBEiJ_T0014889.1 MGP_WSBEiJ_G0013019.1 mouse_genomes_project 6 48952642 48953014 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076916.1 MGP_WSBEiJ_G0030067.1 mouse_genomes_project 6 78692099 78694402 - Reg3g protein_coding retained_intron MGP_WSBEiJ_T0076917.1 MGP_WSBEiJ_G0030067.1 mouse_genomes_project 6 78692099 78694703 - MGP_WSBEiJ_P0076917 Reg3g protein_coding protein_coding MGP_WSBEiJ_T0014953.1 MGP_WSBEiJ_G0013083.1 mouse_genomes_project 6 66779017 66779599 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004886.1 MGP_WSBEiJ_G0004189.1 mouse_genomes_project 6 53930049 53941529 - Gm44073 antisense antisense MGP_WSBEiJ_T0011469.1 MGP_WSBEiJ_G0009626.1 mouse_genomes_project 6 124516927 124517039 + Gm26168 misc_RNA misc_RNA MGP_WSBEiJ_T0076314.1 MGP_WSBEiJ_G0029914.1 mouse_genomes_project 6 50646099 50700453 - MGP_WSBEiJ_P0076314 Gm28308 protein_coding protein_coding MGP_WSBEiJ_T0077421.1 MGP_WSBEiJ_G0030168.1 mouse_genomes_project 6 88495115 88543928 - MGP_WSBEiJ_P0077421 Gm45140 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077425.1 MGP_WSBEiJ_G0030168.1 mouse_genomes_project 6 88498607 88530221 - MGP_WSBEiJ_P0077425 Gm45140 protein_coding protein_coding MGP_WSBEiJ_T0002633.1 MGP_WSBEiJ_G0002520.1 mouse_genomes_project 6 39140257 39140745 + MGP_WSBEiJ_P0002633 Trbv29 TR_V_gene TR_V_gene MGP_WSBEiJ_T0078060.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114874658 114878682 - MGP_WSBEiJ_P0078060 Rpusd3 protein_coding protein_coding MGP_WSBEiJ_T0078061.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114874668 114878661 - MGP_WSBEiJ_P0078061 Rpusd3 protein_coding protein_coding MGP_WSBEiJ_T0078062.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114874887 114875792 - Rpusd3 protein_coding retained_intron MGP_WSBEiJ_T0078063.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114875445 114878661 - MGP_WSBEiJ_P0078063 Rpusd3 protein_coding protein_coding MGP_WSBEiJ_T0078064.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114875649 114878652 - MGP_WSBEiJ_P0078064 Rpusd3 protein_coding protein_coding MGP_WSBEiJ_T0078065.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114876128 114878661 - Rpusd3 protein_coding retained_intron MGP_WSBEiJ_T0078066.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114876233 114878656 - MGP_WSBEiJ_P0078066 Rpusd3 protein_coding protein_coding MGP_WSBEiJ_T0078067.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114876535 114878390 - Rpusd3 protein_coding retained_intron MGP_WSBEiJ_T0078068.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114876562 114878673 - MGP_WSBEiJ_P0078068 Rpusd3 protein_coding protein_coding MGP_WSBEiJ_T0078069.1 MGP_WSBEiJ_G0030293.1 mouse_genomes_project 6 114877643 114878665 - Rpusd3 protein_coding retained_intron MGP_WSBEiJ_T0076649.1 MGP_WSBEiJ_G0030009.1 mouse_genomes_project 6 65875321 66154955 - MGP_WSBEiJ_P0076649 protein_coding protein_coding MGP_WSBEiJ_T0098414.1 MGP_WSBEiJ_G0037077.1 mouse_genomes_project 6 40295653 40295760 - Gm24611 snRNA snRNA MGP_WSBEiJ_T0005021.1 MGP_WSBEiJ_G0004282.1 mouse_genomes_project 6 137401667 137404797 - Gm17088 antisense antisense MGP_WSBEiJ_T0002051.1 MGP_WSBEiJ_G0001971.1 mouse_genomes_project 6 95798536 95799540 + TEC TEC MGP_WSBEiJ_T0077088.1 MGP_WSBEiJ_G0030101.1 mouse_genomes_project 6 83875783 83902710 - MGP_WSBEiJ_P0077088 Dguok protein_coding protein_coding MGP_WSBEiJ_T0077089.1 MGP_WSBEiJ_G0030101.1 mouse_genomes_project 6 83875785 83902614 - MGP_WSBEiJ_P0077089 Dguok protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077090.1 MGP_WSBEiJ_G0030101.1 mouse_genomes_project 6 83875875 83902592 - MGP_WSBEiJ_P0077090 Dguok protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077091.1 MGP_WSBEiJ_G0030101.1 mouse_genomes_project 6 83876431 83889302 - Dguok protein_coding processed_transcript MGP_WSBEiJ_T0077092.1 MGP_WSBEiJ_G0030101.1 mouse_genomes_project 6 83876779 83882579 - Dguok protein_coding processed_transcript MGP_WSBEiJ_T0077093.1 MGP_WSBEiJ_G0030101.1 mouse_genomes_project 6 83883547 83885988 - Dguok protein_coding retained_intron MGP_WSBEiJ_T0077094.1 MGP_WSBEiJ_G0030101.1 mouse_genomes_project 6 83885775 83902678 - Dguok protein_coding retained_intron MGP_WSBEiJ_T0100120.1 MGP_WSBEiJ_G0038718.1 mouse_genomes_project 6 8913993 8925879 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100121.1 MGP_WSBEiJ_G0038718.1 mouse_genomes_project 6 8914185 8914745 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0076450.1 MGP_WSBEiJ_G0029946.1 mouse_genomes_project 6 53972916 53985038 + MGP_WSBEiJ_P0076450 Aqp1 protein_coding protein_coding MGP_WSBEiJ_T0079850.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153048001 153082430 - MGP_WSBEiJ_P0079850 Amn1 protein_coding protein_coding MGP_WSBEiJ_T0079851.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153048121 153067093 - Amn1 protein_coding retained_intron MGP_WSBEiJ_T0079852.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153048431 153082382 - Amn1 protein_coding processed_transcript MGP_WSBEiJ_T0079853.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153048432 153082403 - MGP_WSBEiJ_P0079853 Amn1 protein_coding protein_coding MGP_WSBEiJ_T0079854.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153048437 153077205 - Amn1 protein_coding processed_transcript MGP_WSBEiJ_T0079855.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153048453 153077202 - MGP_WSBEiJ_P0079855 Amn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079856.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153058777 153082399 - Amn1 protein_coding processed_transcript MGP_WSBEiJ_T0079857.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153061940 153082388 - Amn1 protein_coding retained_intron MGP_WSBEiJ_T0079858.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153062106 153082413 - Amn1 protein_coding processed_transcript MGP_WSBEiJ_T0079859.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153064595 153082405 - MGP_WSBEiJ_P0079859 Amn1 protein_coding protein_coding MGP_WSBEiJ_T0079860.1 MGP_WSBEiJ_G0030676.1 mouse_genomes_project 6 153066583 153082420 - Amn1 protein_coding retained_intron MGP_WSBEiJ_T0005052.1 MGP_WSBEiJ_G0004309.1 mouse_genomes_project 6 151837470 151874831 - Far2os2 antisense antisense MGP_WSBEiJ_T0100912.1 MGP_WSBEiJ_G0039370.1 mouse_genomes_project 6 57483532 57484440 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008465.1 MGP_WSBEiJ_G0006849.1 mouse_genomes_project 6 50475081 50491617 + Gm44077 lincRNA lincRNA MGP_WSBEiJ_T0002011.1 MGP_WSBEiJ_G0001931.1 mouse_genomes_project 6 87547171 87549335 + TEC TEC MGP_WSBEiJ_T0077720.1 MGP_WSBEiJ_G0030228.1 mouse_genomes_project 6 93067378 93096994 - MGP_WSBEiJ_P0077720 Rbsn protein_coding protein_coding MGP_WSBEiJ_T0077721.1 MGP_WSBEiJ_G0030228.1 mouse_genomes_project 6 93070507 93081320 - MGP_WSBEiJ_P0077721 Rbsn protein_coding protein_coding MGP_WSBEiJ_T0077722.1 MGP_WSBEiJ_G0030228.1 mouse_genomes_project 6 93071049 93083223 - Rbsn protein_coding processed_transcript MGP_WSBEiJ_T0077723.1 MGP_WSBEiJ_G0030228.1 mouse_genomes_project 6 93071412 93074795 - Rbsn protein_coding retained_intron MGP_WSBEiJ_T0077724.1 MGP_WSBEiJ_G0030228.1 mouse_genomes_project 6 93088741 93096918 - MGP_WSBEiJ_P0077724 Rbsn protein_coding protein_coding MGP_WSBEiJ_T0077725.1 MGP_WSBEiJ_G0030228.1 mouse_genomes_project 6 93093146 93096638 - MGP_WSBEiJ_P0077725 Rbsn protein_coding protein_coding MGP_WSBEiJ_T0075956.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40222353 40239840 + MGP_WSBEiJ_P0075956 Casp2 protein_coding protein_coding MGP_WSBEiJ_T0075957.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40222424 40226480 + Casp2 protein_coding retained_intron MGP_WSBEiJ_T0075958.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40222488 40237825 + MGP_WSBEiJ_P0075958 Casp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075959.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40224759 40225399 + Casp2 protein_coding processed_transcript MGP_WSBEiJ_T0075960.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40225378 40226966 + Casp2 protein_coding retained_intron MGP_WSBEiJ_T0075961.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40226643 40237230 + Casp2 protein_coding processed_transcript MGP_WSBEiJ_T0075962.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40233818 40237866 + Casp2 protein_coding retained_intron MGP_WSBEiJ_T0075963.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40236969 40237823 + Casp2 protein_coding processed_transcript MGP_WSBEiJ_T0075964.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40237113 40237974 + Casp2 protein_coding processed_transcript MGP_WSBEiJ_T0075965.1 MGP_WSBEiJ_G0029821.1 mouse_genomes_project 6 40237139 40238100 + Casp2 protein_coding processed_transcript MGP_WSBEiJ_T0014807.1 MGP_WSBEiJ_G0012937.1 mouse_genomes_project 6 13016875 13017149 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0001962.1 MGP_WSBEiJ_G0001882.1 mouse_genomes_project 6 71318496 71321687 - TEC TEC MGP_WSBEiJ_T0015093.1 MGP_WSBEiJ_G0013223.1 mouse_genomes_project 6 120159154 120160752 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008478.1 MGP_WSBEiJ_G0006858.1 mouse_genomes_project 6 54331883 54341881 + Gm3279 lincRNA lincRNA MGP_WSBEiJ_T0078994.1 MGP_WSBEiJ_G0030471.1 mouse_genomes_project 6 128848854 128853256 - MGP_WSBEiJ_P0078994 Kcna1 protein_coding protein_coding MGP_WSBEiJ_T0078995.1 MGP_WSBEiJ_G0030471.1 mouse_genomes_project 6 128850123 128853273 - MGP_WSBEiJ_P0078995 Kcna1 protein_coding protein_coding MGP_WSBEiJ_T0078996.1 MGP_WSBEiJ_G0030471.1 mouse_genomes_project 6 128852234 128854846 - Kcna1 protein_coding processed_transcript MGP_WSBEiJ_T0077750.1 MGP_WSBEiJ_G0030235.1 mouse_genomes_project 6 95493659 95600459 + MGP_WSBEiJ_P0077750 Slc25a26 protein_coding protein_coding MGP_WSBEiJ_T0077751.1 MGP_WSBEiJ_G0030235.1 mouse_genomes_project 6 95493661 95599841 + MGP_WSBEiJ_P0077751 Slc25a26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077752.1 MGP_WSBEiJ_G0030235.1 mouse_genomes_project 6 95493697 95600459 + MGP_WSBEiJ_P0077752 Slc25a26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077753.1 MGP_WSBEiJ_G0030235.1 mouse_genomes_project 6 95493877 95504161 + Slc25a26 protein_coding processed_transcript MGP_WSBEiJ_T0077754.1 MGP_WSBEiJ_G0030235.1 mouse_genomes_project 6 95500857 95591061 + MGP_WSBEiJ_P0077754 Slc25a26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077755.1 MGP_WSBEiJ_G0030235.1 mouse_genomes_project 6 95527647 95599649 + Slc25a26 protein_coding processed_transcript MGP_WSBEiJ_T0077756.1 MGP_WSBEiJ_G0030235.1 mouse_genomes_project 6 95571785 95599369 + Slc25a26 protein_coding processed_transcript MGP_WSBEiJ_T0008366.1 MGP_WSBEiJ_G0006783.1 mouse_genomes_project 6 3292444 3313747 + Gm20685 lincRNA lincRNA MGP_WSBEiJ_T0079252.1 MGP_WSBEiJ_G0030554.1 mouse_genomes_project 6 135999474 136000476 + MGP_WSBEiJ_P0079252 Tas2r123 protein_coding protein_coding MGP_WSBEiJ_T0078070.1 MGP_WSBEiJ_G0030294.1 mouse_genomes_project 6 114884009 114894588 - MGP_WSBEiJ_P0078070 Cidec protein_coding protein_coding MGP_WSBEiJ_T0078071.1 MGP_WSBEiJ_G0030294.1 mouse_genomes_project 6 114888339 114894467 - MGP_WSBEiJ_P0078071 Cidec protein_coding protein_coding MGP_WSBEiJ_T0075910.1 MGP_WSBEiJ_G0029796.1 mouse_genomes_project 6 38856170 38860561 - MGP_WSBEiJ_P0075910 protein_coding protein_coding MGP_WSBEiJ_T0079251.1 MGP_WSBEiJ_G0030553.1 mouse_genomes_project 6 135966244 135967155 + MGP_WSBEiJ_P0079251 Tas2r109 protein_coding protein_coding MGP_WSBEiJ_T0015165.1 MGP_WSBEiJ_G0013295.1 mouse_genomes_project 6 136955822 136956151 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098418.1 MGP_WSBEiJ_G0037081.1 mouse_genomes_project 6 51975534 51975698 + Gm25818 snRNA snRNA MGP_WSBEiJ_T0001886.1 MGP_WSBEiJ_G0001806.1 mouse_genomes_project 6 14898786 14904390 + TEC TEC MGP_WSBEiJ_T0079253.1 MGP_WSBEiJ_G0030555.1 mouse_genomes_project 6 136007831 136008749 + MGP_WSBEiJ_P0079253 Tas2r116 protein_coding protein_coding MGP_WSBEiJ_T0098409.1 MGP_WSBEiJ_G0037072.1 mouse_genomes_project 6 30576573 30576677 - Gm22321 snRNA snRNA MGP_WSBEiJ_T0004941.1 MGP_WSBEiJ_G0004223.1 mouse_genomes_project 6 88619341 88624954 - Gm26636 antisense antisense MGP_WSBEiJ_T0076838.1 MGP_WSBEiJ_G0030049.1 mouse_genomes_project 6 72499423 72501070 - Sh2d6 protein_coding processed_transcript MGP_WSBEiJ_T0076839.1 MGP_WSBEiJ_G0030049.1 mouse_genomes_project 6 72499424 72505660 - MGP_WSBEiJ_P0076839 Sh2d6 protein_coding protein_coding MGP_WSBEiJ_T0076840.1 MGP_WSBEiJ_G0030049.1 mouse_genomes_project 6 72499433 72506316 - MGP_WSBEiJ_P0076840 Sh2d6 protein_coding protein_coding MGP_WSBEiJ_T0076841.1 MGP_WSBEiJ_G0030049.1 mouse_genomes_project 6 72499435 72506405 - MGP_WSBEiJ_P0076841 Sh2d6 protein_coding protein_coding MGP_WSBEiJ_T0076842.1 MGP_WSBEiJ_G0030049.1 mouse_genomes_project 6 72501106 72505755 - Sh2d6 protein_coding processed_transcript MGP_WSBEiJ_T0076843.1 MGP_WSBEiJ_G0030049.1 mouse_genomes_project 6 72503186 72507412 - Sh2d6 protein_coding retained_intron MGP_WSBEiJ_T0077875.1 MGP_WSBEiJ_G0030261.1 mouse_genomes_project 6 103448457 103452023 - Cntn3 protein_coding retained_intron MGP_WSBEiJ_T0077876.1 MGP_WSBEiJ_G0030261.1 mouse_genomes_project 6 103449106 103765749 - MGP_WSBEiJ_P0077876 Cntn3 protein_coding protein_coding MGP_WSBEiJ_T0077877.1 MGP_WSBEiJ_G0030261.1 mouse_genomes_project 6 103449108 103765753 - MGP_WSBEiJ_P0077877 Cntn3 protein_coding protein_coding MGP_WSBEiJ_T0076030.1 MGP_WSBEiJ_G0029849.1 mouse_genomes_project 6 41212822 41213761 + MGP_WSBEiJ_P0076030 Olfr435 protein_coding protein_coding MGP_WSBEiJ_T0078349.1 MGP_WSBEiJ_G0030347.1 mouse_genomes_project 6 118675467 118682030 + MGP_WSBEiJ_P0078349 Cxcl12 protein_coding protein_coding MGP_WSBEiJ_T0078350.1 MGP_WSBEiJ_G0030347.1 mouse_genomes_project 6 118675506 118688327 + MGP_WSBEiJ_P0078350 Cxcl12 protein_coding protein_coding MGP_WSBEiJ_T0078351.1 MGP_WSBEiJ_G0030347.1 mouse_genomes_project 6 118675509 118683088 + Cxcl12 protein_coding retained_intron MGP_WSBEiJ_T0078352.1 MGP_WSBEiJ_G0030347.1 mouse_genomes_project 6 118675509 118688328 + MGP_WSBEiJ_P0078352 Cxcl12 protein_coding protein_coding MGP_WSBEiJ_T0075947.1 MGP_WSBEiJ_G0029816.1 mouse_genomes_project 6 39954759 39962210 + MGP_WSBEiJ_P0075947 Sva protein_coding protein_coding MGP_WSBEiJ_T0075948.1 MGP_WSBEiJ_G0029816.1 mouse_genomes_project 6 39954759 39962216 + MGP_WSBEiJ_P0075948 Sva protein_coding protein_coding MGP_WSBEiJ_T0015038.1 MGP_WSBEiJ_G0013168.1 mouse_genomes_project 6 100955387 100955853 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015168.1 MGP_WSBEiJ_G0013298.1 mouse_genomes_project 6 138422718 138423092 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008577.1 MGP_WSBEiJ_G0006938.1 mouse_genomes_project 6 119415760 119416082 + Gm29509 lincRNA lincRNA MGP_WSBEiJ_T0005046.1 MGP_WSBEiJ_G0004304.1 mouse_genomes_project 6 148946820 148951989 + Gm15543 antisense antisense MGP_WSBEiJ_T0015102.1 MGP_WSBEiJ_G0013232.1 mouse_genomes_project 6 123350673 123351339 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015000.1 MGP_WSBEiJ_G0013130.1 mouse_genomes_project 6 85543086 85543480 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0004854.1 MGP_WSBEiJ_G0004166.1 mouse_genomes_project 6 36804784 36808474 - 1700025N23Rik antisense antisense MGP_WSBEiJ_T0076377.1 MGP_WSBEiJ_G0029931.1 mouse_genomes_project 6 52419216 52534686 - MGP_WSBEiJ_P0076377 Cpvl protein_coding protein_coding MGP_WSBEiJ_T0076378.1 MGP_WSBEiJ_G0029931.1 mouse_genomes_project 6 52419316 52534677 - MGP_WSBEiJ_P0076378 Cpvl protein_coding protein_coding MGP_WSBEiJ_T0076379.1 MGP_WSBEiJ_G0029931.1 mouse_genomes_project 6 52419316 52534677 - MGP_WSBEiJ_P0076379 Cpvl protein_coding protein_coding MGP_WSBEiJ_T0078142.1 MGP_WSBEiJ_G0030309.1 mouse_genomes_project 6 115225532 115533538 - MGP_WSBEiJ_P0078142 Atp2b2 protein_coding protein_coding MGP_WSBEiJ_T0078143.1 MGP_WSBEiJ_G0030309.1 mouse_genomes_project 6 115227370 115376704 - MGP_WSBEiJ_P0078143 Atp2b2 protein_coding protein_coding MGP_WSBEiJ_T0078144.1 MGP_WSBEiJ_G0030309.1 mouse_genomes_project 6 115228767 115376704 - MGP_WSBEiJ_P0078144 Atp2b2 protein_coding protein_coding MGP_WSBEiJ_T0078145.1 MGP_WSBEiJ_G0030309.1 mouse_genomes_project 6 115230001 115420790 - MGP_WSBEiJ_P0078145 Atp2b2 protein_coding protein_coding MGP_WSBEiJ_T0078146.1 MGP_WSBEiJ_G0030309.1 mouse_genomes_project 6 115232477 115326494 - MGP_WSBEiJ_P0078146 Atp2b2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078147.1 MGP_WSBEiJ_G0030309.1 mouse_genomes_project 6 115285999 115376534 - Atp2b2 protein_coding retained_intron MGP_WSBEiJ_T0078148.1 MGP_WSBEiJ_G0030309.1 mouse_genomes_project 6 115326494 115395684 - Atp2b2 protein_coding processed_transcript MGP_WSBEiJ_T0078149.1 MGP_WSBEiJ_G0030309.1 mouse_genomes_project 6 115326712 115534077 - Atp2b2 protein_coding processed_transcript MGP_WSBEiJ_T0078241.1 MGP_WSBEiJ_G0030327.1 mouse_genomes_project 6 117255272 117278779 - MGP_WSBEiJ_P0078241 Efcab12 protein_coding protein_coding MGP_WSBEiJ_T0078242.1 MGP_WSBEiJ_G0030327.1 mouse_genomes_project 6 117255438 117278779 - MGP_WSBEiJ_P0078242 Efcab12 protein_coding protein_coding MGP_WSBEiJ_T0078243.1 MGP_WSBEiJ_G0030327.1 mouse_genomes_project 6 117255438 117278779 - MGP_WSBEiJ_P0078243 Efcab12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078558.1 MGP_WSBEiJ_G0030381.1 mouse_genomes_project 6 122578947 122607869 - MGP_WSBEiJ_P0078558 Bid protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078559.1 MGP_WSBEiJ_G0030381.1 mouse_genomes_project 6 122579872 122607886 - MGP_WSBEiJ_P0078559 Bid protein_coding protein_coding MGP_WSBEiJ_T0078560.1 MGP_WSBEiJ_G0030381.1 mouse_genomes_project 6 122582636 122584587 - Bid protein_coding retained_intron MGP_WSBEiJ_T0078561.1 MGP_WSBEiJ_G0030381.1 mouse_genomes_project 6 122587169 122607831 - MGP_WSBEiJ_P0078561 Bid protein_coding protein_coding MGP_WSBEiJ_T0078562.1 MGP_WSBEiJ_G0030381.1 mouse_genomes_project 6 122593940 122607836 - Bid protein_coding processed_transcript MGP_WSBEiJ_T0010617.1 MGP_WSBEiJ_G0008774.1 mouse_genomes_project 6 104091905 104092007 + Mir6373 miRNA miRNA MGP_WSBEiJ_T0002137.1 MGP_WSBEiJ_G0002056.1 mouse_genomes_project 6 150043631 150045977 - TEC TEC MGP_WSBEiJ_T0002624.1 MGP_WSBEiJ_G0002514.1 mouse_genomes_project 6 39029567 39030059 + MGP_WSBEiJ_P0002624 Trbv17 TR_V_gene TR_V_gene MGP_WSBEiJ_T0015134.1 MGP_WSBEiJ_G0013264.1 mouse_genomes_project 6 130820792 130821984 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075887.1 MGP_WSBEiJ_G0029784.1 mouse_genomes_project 6 38333738 38334751 + MGP_WSBEiJ_P0075887 Tas2r108 protein_coding protein_coding MGP_WSBEiJ_T0078347.1 MGP_WSBEiJ_G0030346.1 mouse_genomes_project 6 118199748 118225619 - MGP_WSBEiJ_P0078347 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078348.1 MGP_WSBEiJ_G0030346.1 mouse_genomes_project 6 118203264 118225501 - MGP_WSBEiJ_P0078348 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078584.1 MGP_WSBEiJ_G0030385.1 mouse_genomes_project 6 122951530 122978726 + MGP_WSBEiJ_P0078584 Usp18 protein_coding protein_coding MGP_WSBEiJ_T0078585.1 MGP_WSBEiJ_G0030385.1 mouse_genomes_project 6 122959488 122961449 + Usp18 protein_coding retained_intron MGP_WSBEiJ_T0078586.1 MGP_WSBEiJ_G0030385.1 mouse_genomes_project 6 122968238 122970007 + Usp18 protein_coding retained_intron MGP_WSBEiJ_T0078587.1 MGP_WSBEiJ_G0030385.1 mouse_genomes_project 6 122975376 122976292 + MGP_WSBEiJ_P0078587 Usp18 protein_coding protein_coding MGP_WSBEiJ_T0001939.1 MGP_WSBEiJ_G0001859.1 mouse_genomes_project 6 44878328 44882078 + TEC TEC MGP_WSBEiJ_T0015197.1 MGP_WSBEiJ_G0013327.1 mouse_genomes_project 6 153263565 153264010 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015055.1 MGP_WSBEiJ_G0013185.1 mouse_genomes_project 6 106436775 106438689 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014811.1 MGP_WSBEiJ_G0012941.1 mouse_genomes_project 6 14687211 14688466 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076531.1 MGP_WSBEiJ_G0029977.1 mouse_genomes_project 6 56498740 56604445 - MGP_WSBEiJ_P0076531 Vopp1 protein_coding protein_coding MGP_WSBEiJ_T0076532.1 MGP_WSBEiJ_G0029977.1 mouse_genomes_project 6 56527112 56604289 - MGP_WSBEiJ_P0076532 Vopp1 protein_coding protein_coding MGP_WSBEiJ_T0076533.1 MGP_WSBEiJ_G0029977.1 mouse_genomes_project 6 56529419 56604459 - MGP_WSBEiJ_P0076533 Vopp1 protein_coding protein_coding MGP_WSBEiJ_T0076534.1 MGP_WSBEiJ_G0029977.1 mouse_genomes_project 6 56533208 56604463 - MGP_WSBEiJ_P0076534 Vopp1 protein_coding protein_coding MGP_WSBEiJ_T0076535.1 MGP_WSBEiJ_G0029977.1 mouse_genomes_project 6 56537424 56603949 - Vopp1 protein_coding processed_transcript MGP_WSBEiJ_T0076162.1 MGP_WSBEiJ_G0029880.1 mouse_genomes_project 6 46929549 46933393 + MGP_WSBEiJ_P0076162 Gimap9 protein_coding protein_coding MGP_WSBEiJ_T0076163.1 MGP_WSBEiJ_G0029880.1 mouse_genomes_project 6 46932204 46933806 + MGP_WSBEiJ_P0076163 Gimap9 protein_coding protein_coding MGP_WSBEiJ_T0017659.1 MGP_WSBEiJ_G0015049.1 mouse_genomes_project 6 47110865 47127323 - Gm44764 processed_transcript lincRNA MGP_WSBEiJ_T0017660.1 MGP_WSBEiJ_G0015049.1 mouse_genomes_project 6 47126510 47127330 - Gm44764 processed_transcript retained_intron MGP_WSBEiJ_T0097445.1 MGP_WSBEiJ_G0036115.1 mouse_genomes_project 6 91612615 91613195 - Gm44105 sense_intronic sense_intronic MGP_WSBEiJ_T0075892.1 MGP_WSBEiJ_G0029788.1 mouse_genomes_project 6 38421079 38432236 - MGP_WSBEiJ_P0075892 Clec5a protein_coding protein_coding MGP_WSBEiJ_T0075893.1 MGP_WSBEiJ_G0029788.1 mouse_genomes_project 6 38422903 38432254 - Clec5a protein_coding processed_transcript MGP_WSBEiJ_T0075894.1 MGP_WSBEiJ_G0029788.1 mouse_genomes_project 6 38424037 38432228 - MGP_WSBEiJ_P0075894 Clec5a protein_coding protein_coding MGP_WSBEiJ_T0075895.1 MGP_WSBEiJ_G0029788.1 mouse_genomes_project 6 38424147 38432223 - MGP_WSBEiJ_P0075895 Clec5a protein_coding protein_coding MGP_WSBEiJ_T0014894.1 MGP_WSBEiJ_G0013024.1 mouse_genomes_project 6 50609497 50609766 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100948.1 MGP_WSBEiJ_G0039405.1 mouse_genomes_project 6 136057110 136058039 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001947.1 MGP_WSBEiJ_G0001867.1 mouse_genomes_project 6 51227364 51227976 - TEC TEC MGP_WSBEiJ_T0077887.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107036438 107201055 + Cntn4 protein_coding processed_transcript MGP_WSBEiJ_T0077888.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107036523 108083923 + MGP_WSBEiJ_P0077888 Cntn4 protein_coding protein_coding MGP_WSBEiJ_T0077889.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107036523 108109564 + MGP_WSBEiJ_P0077889 Cntn4 protein_coding protein_coding MGP_WSBEiJ_T0077890.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107036553 108109569 + MGP_WSBEiJ_P0077890 Cntn4 protein_coding protein_coding MGP_WSBEiJ_T0077891.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107294202 108083929 + MGP_WSBEiJ_P0077891 Cntn4 protein_coding protein_coding MGP_WSBEiJ_T0077892.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107498510 108018179 + MGP_WSBEiJ_P0077892 Cntn4 protein_coding protein_coding MGP_WSBEiJ_T0077893.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107498663 107920106 + Cntn4 protein_coding processed_transcript MGP_WSBEiJ_T0077894.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107498751 108083146 + MGP_WSBEiJ_P0077894 Cntn4 protein_coding protein_coding MGP_WSBEiJ_T0077895.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107498800 107737029 + Cntn4 protein_coding processed_transcript MGP_WSBEiJ_T0077896.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 107908123 108108016 + Cntn4 protein_coding processed_transcript MGP_WSBEiJ_T0077897.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 108063292 108109451 + Cntn4 protein_coding processed_transcript MGP_WSBEiJ_T0077898.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 108088887 108089863 + Cntn4 protein_coding retained_intron MGP_WSBEiJ_T0077899.1 MGP_WSBEiJ_G0030264.1 mouse_genomes_project 6 108103728 108108160 + Cntn4 protein_coding processed_transcript MGP_WSBEiJ_T0079600.1 MGP_WSBEiJ_G0030636.1 mouse_genomes_project 6 146497209 146637090 - MGP_WSBEiJ_P0079600 St8sia1 protein_coding protein_coding MGP_WSBEiJ_T0079601.1 MGP_WSBEiJ_G0030636.1 mouse_genomes_project 6 146504748 146636779 - MGP_WSBEiJ_P0079601 St8sia1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079602.1 MGP_WSBEiJ_G0030636.1 mouse_genomes_project 6 146505378 146561641 - St8sia1 protein_coding processed_transcript MGP_WSBEiJ_T0098416.1 MGP_WSBEiJ_G0037079.1 mouse_genomes_project 6 40804462 40804567 + Gm23982 snRNA snRNA MGP_WSBEiJ_T0014974.1 MGP_WSBEiJ_G0013104.1 mouse_genomes_project 6 72000159 72001261 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098410.1 MGP_WSBEiJ_G0037073.1 mouse_genomes_project 6 32842631 32842787 + Gm23435 snRNA snRNA MGP_WSBEiJ_T0098429.1 MGP_WSBEiJ_G0037092.1 mouse_genomes_project 6 94744589 94744695 + Gm23035 snRNA snRNA MGP_WSBEiJ_T0001968.1 MGP_WSBEiJ_G0001888.1 mouse_genomes_project 6 72046176 72048789 + TEC TEC MGP_WSBEiJ_T0001934.1 MGP_WSBEiJ_G0001854.1 mouse_genomes_project 6 44141243 44143775 + TEC TEC MGP_WSBEiJ_T0001959.1 MGP_WSBEiJ_G0001879.1 mouse_genomes_project 6 70731810 70734257 - TEC TEC MGP_WSBEiJ_T0008605.1 MGP_WSBEiJ_G0006961.1 mouse_genomes_project 6 137643101 137663280 - Gm44448 lincRNA lincRNA MGP_WSBEiJ_T0000271.1 MGP_WSBEiJ_G0000219.1 mouse_genomes_project 6 67076155 67076656 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0015185.1 MGP_WSBEiJ_G0013315.1 mouse_genomes_project 6 145790295 145791365 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079774.1 MGP_WSBEiJ_G0030663.1 mouse_genomes_project 6 150872653 150881309 - MGP_WSBEiJ_P0079774 Mansc4 protein_coding protein_coding MGP_WSBEiJ_T0079775.1 MGP_WSBEiJ_G0030663.1 mouse_genomes_project 6 150875934 150881278 - MGP_WSBEiJ_P0079775 Mansc4 protein_coding protein_coding MGP_WSBEiJ_T0008613.1 MGP_WSBEiJ_G0006965.1 mouse_genomes_project 6 138610171 138620356 - Gm44275 lincRNA lincRNA MGP_WSBEiJ_T0075709.1 MGP_WSBEiJ_G0029743.1 mouse_genomes_project 6 32772893 32846633 + MGP_WSBEiJ_P0075709 Nup205 protein_coding protein_coding MGP_WSBEiJ_T0075710.1 MGP_WSBEiJ_G0029743.1 mouse_genomes_project 6 32772902 32846633 + MGP_WSBEiJ_P0075710 Nup205 protein_coding protein_coding MGP_WSBEiJ_T0075711.1 MGP_WSBEiJ_G0029743.1 mouse_genomes_project 6 32773088 32802546 + Nup205 protein_coding retained_intron MGP_WSBEiJ_T0075712.1 MGP_WSBEiJ_G0029743.1 mouse_genomes_project 6 32773101 32846627 + MGP_WSBEiJ_P0075712 Nup205 protein_coding protein_coding MGP_WSBEiJ_T0075713.1 MGP_WSBEiJ_G0029743.1 mouse_genomes_project 6 32801939 32846633 + Nup205 protein_coding processed_transcript MGP_WSBEiJ_T0075714.1 MGP_WSBEiJ_G0029743.1 mouse_genomes_project 6 32822637 32837206 + Nup205 protein_coding retained_intron MGP_WSBEiJ_T0075715.1 MGP_WSBEiJ_G0029743.1 mouse_genomes_project 6 32844210 32845509 + Nup205 protein_coding retained_intron MGP_WSBEiJ_T0097450.1 MGP_WSBEiJ_G0036120.1 mouse_genomes_project 6 130715872 130717252 - Gm44190 sense_intronic sense_intronic MGP_WSBEiJ_T0015064.1 MGP_WSBEiJ_G0013194.1 mouse_genomes_project 6 110835086 110835534 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002034.1 MGP_WSBEiJ_G0001954.1 mouse_genomes_project 6 91106799 91109933 + TEC TEC MGP_WSBEiJ_T0075511.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27899437 27930603 - MGP_WSBEiJ_P0075511 Tmem209 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075512.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27901185 27930614 - MGP_WSBEiJ_P0075512 Tmem209 protein_coding protein_coding MGP_WSBEiJ_T0075513.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27901410 27930615 - MGP_WSBEiJ_P0075513 Tmem209 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075514.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27901616 27930682 - MGP_WSBEiJ_P0075514 Tmem209 protein_coding protein_coding MGP_WSBEiJ_T0075515.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27902802 27930617 - MGP_WSBEiJ_P0075515 Tmem209 protein_coding protein_coding MGP_WSBEiJ_T0075516.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27903188 27930614 - MGP_WSBEiJ_P0075516 Tmem209 protein_coding protein_coding MGP_WSBEiJ_T0075517.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27911531 27913351 - Tmem209 protein_coding retained_intron MGP_WSBEiJ_T0075518.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27923173 27930648 - MGP_WSBEiJ_P0075518 Tmem209 protein_coding protein_coding MGP_WSBEiJ_T0075519.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27925651 27930621 - Tmem209 protein_coding retained_intron MGP_WSBEiJ_T0075520.1 MGP_WSBEiJ_G0029711.1 mouse_genomes_project 6 27926663 27930623 - MGP_WSBEiJ_P0075520 Tmem209 protein_coding protein_coding MGP_WSBEiJ_T0008462.1 MGP_WSBEiJ_G0006847.1 mouse_genomes_project 6 49805956 49807208 - 0610033M10Rik lincRNA lincRNA MGP_WSBEiJ_T0008463.1 MGP_WSBEiJ_G0006847.1 mouse_genomes_project 6 49806193 49807022 - 0610033M10Rik lincRNA lincRNA MGP_WSBEiJ_T0098411.1 MGP_WSBEiJ_G0037074.1 mouse_genomes_project 6 35798683 35798787 + Gm23231 snRNA snRNA MGP_WSBEiJ_T0000287.1 MGP_WSBEiJ_G0000235.1 mouse_genomes_project 6 68529766 68530161 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0076238.1 MGP_WSBEiJ_G0029899.1 mouse_genomes_project 6 47666732 47675492 + MGP_WSBEiJ_P0076238 Fam221a protein_coding protein_coding MGP_WSBEiJ_T0076239.1 MGP_WSBEiJ_G0029899.1 mouse_genomes_project 6 47666745 47689868 + MGP_WSBEiJ_P0076239 Fam221a protein_coding protein_coding MGP_WSBEiJ_T0076240.1 MGP_WSBEiJ_G0029899.1 mouse_genomes_project 6 47678124 47686433 + Fam221a protein_coding processed_transcript MGP_WSBEiJ_T0076241.1 MGP_WSBEiJ_G0029899.1 mouse_genomes_project 6 47686229 47690256 + Fam221a protein_coding retained_intron MGP_WSBEiJ_T0076242.1 MGP_WSBEiJ_G0029899.1 mouse_genomes_project 6 47688460 47690201 + Fam221a protein_coding retained_intron MGP_WSBEiJ_T0079020.1 MGP_WSBEiJ_G0030477.1 mouse_genomes_project 6 129170746 129198606 + D6Wsu163e protein_coding retained_intron MGP_WSBEiJ_T0079021.1 MGP_WSBEiJ_G0030477.1 mouse_genomes_project 6 129170750 129204749 + MGP_WSBEiJ_P0079021 D6Wsu163e protein_coding protein_coding MGP_WSBEiJ_T0079022.1 MGP_WSBEiJ_G0030477.1 mouse_genomes_project 6 129170755 129173419 + D6Wsu163e protein_coding retained_intron MGP_WSBEiJ_T0079023.1 MGP_WSBEiJ_G0030477.1 mouse_genomes_project 6 129170759 129178206 + D6Wsu163e protein_coding retained_intron MGP_WSBEiJ_T0079024.1 MGP_WSBEiJ_G0030477.1 mouse_genomes_project 6 129170813 129175523 + MGP_WSBEiJ_P0079024 D6Wsu163e protein_coding protein_coding MGP_WSBEiJ_T0079025.1 MGP_WSBEiJ_G0030477.1 mouse_genomes_project 6 129180998 129185813 + D6Wsu163e protein_coding retained_intron MGP_WSBEiJ_T0079026.1 MGP_WSBEiJ_G0030477.1 mouse_genomes_project 6 129203359 129204554 + D6Wsu163e protein_coding retained_intron MGP_WSBEiJ_T0002629.1 MGP_WSBEiJ_G0002518.1 mouse_genomes_project 6 39084994 39085448 + MGP_WSBEiJ_P0002629 Trbv23 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002630.1 MGP_WSBEiJ_G0002518.1 mouse_genomes_project 6 39084994 39085448 + MGP_WSBEiJ_P0002630 Trbv23 TR_V_gene TR_V_gene MGP_WSBEiJ_T0011452.1 MGP_WSBEiJ_G0009609.1 mouse_genomes_project 6 50752041 50752419 + Gm27985 misc_RNA misc_RNA MGP_WSBEiJ_T0004951.1 MGP_WSBEiJ_G0004229.1 mouse_genomes_project 6 89583861 89588276 + Gm15612 antisense antisense MGP_WSBEiJ_T0011450.1 MGP_WSBEiJ_G0009607.1 mouse_genomes_project 6 50736380 50736557 + Gm27543 misc_RNA misc_RNA MGP_WSBEiJ_T0008409.1 MGP_WSBEiJ_G0006812.1 mouse_genomes_project 6 28808474 28820908 + Gm13844 lincRNA lincRNA MGP_WSBEiJ_T0075053.1 MGP_WSBEiJ_G0029627.1 mouse_genomes_project 6 5762659 5766659 + Nxph1 protein_coding processed_transcript MGP_WSBEiJ_T0075054.1 MGP_WSBEiJ_G0029627.1 mouse_genomes_project 6 5762842 6074068 + MGP_WSBEiJ_P0075054 Nxph1 protein_coding protein_coding MGP_WSBEiJ_T0075055.1 MGP_WSBEiJ_G0029627.1 mouse_genomes_project 6 5763904 6074066 + MGP_WSBEiJ_P0075055 Nxph1 protein_coding protein_coding MGP_WSBEiJ_T0002521.1 MGP_WSBEiJ_G0002429.1 mouse_genomes_project 6 39431737 39431787 + MGP_WSBEiJ_P0002521 Trbj2-1 TR_J_gene TR_J_gene MGP_WSBEiJ_T0008446.1 MGP_WSBEiJ_G0006834.1 mouse_genomes_project 6 46363101 46366021 - lincRNA lincRNA MGP_WSBEiJ_T0008420.1 MGP_WSBEiJ_G0006819.1 mouse_genomes_project 6 29576657 29577741 + Gm13850 lincRNA lincRNA MGP_WSBEiJ_T0008481.1 MGP_WSBEiJ_G0006861.1 mouse_genomes_project 6 59691832 59692322 + Gm44410 lincRNA lincRNA MGP_WSBEiJ_T0002610.1 MGP_WSBEiJ_G0002501.1 mouse_genomes_project 6 38752211 38752868 + MGP_WSBEiJ_P0002610 Trbv1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0078425.1 MGP_WSBEiJ_G0030360.1 mouse_genomes_project 6 120744691 120790909 + MGP_WSBEiJ_P0078425 Dcp1b protein_coding protein_coding MGP_WSBEiJ_T0078426.1 MGP_WSBEiJ_G0030360.1 mouse_genomes_project 6 120744726 120789478 + MGP_WSBEiJ_P0078426 Dcp1b protein_coding protein_coding MGP_WSBEiJ_T0078427.1 MGP_WSBEiJ_G0030360.1 mouse_genomes_project 6 120761730 120789499 + Dcp1b protein_coding retained_intron MGP_WSBEiJ_T0078428.1 MGP_WSBEiJ_G0030360.1 mouse_genomes_project 6 120771329 120784140 + Dcp1b protein_coding retained_intron MGP_WSBEiJ_T0078429.1 MGP_WSBEiJ_G0030360.1 mouse_genomes_project 6 120786836 120790907 + Dcp1b protein_coding retained_intron MGP_WSBEiJ_T0000146.1 MGP_WSBEiJ_G0000111.1 mouse_genomes_project 6 67203066 67203517 + MGP_WSBEiJ_P0000146 Igkv14-130 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000147.1 MGP_WSBEiJ_G0000111.1 mouse_genomes_project 6 67203066 67203517 + MGP_WSBEiJ_P0000147 Igkv14-130 IG_V_gene IG_V_gene MGP_WSBEiJ_T0014886.1 MGP_WSBEiJ_G0013016.1 mouse_genomes_project 6 47848936 47849682 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076170.1 MGP_WSBEiJ_G0029882.1 mouse_genomes_project 6 46957442 46964078 - MGP_WSBEiJ_P0076170 Gimap6 protein_coding protein_coding MGP_WSBEiJ_T0076171.1 MGP_WSBEiJ_G0029882.1 mouse_genomes_project 6 46957443 46964066 - MGP_WSBEiJ_P0076171 Gimap6 protein_coding protein_coding MGP_WSBEiJ_T0076172.1 MGP_WSBEiJ_G0029882.1 mouse_genomes_project 6 46959606 46964049 - MGP_WSBEiJ_P0076172 Gimap6 protein_coding protein_coding MGP_WSBEiJ_T0076173.1 MGP_WSBEiJ_G0029882.1 mouse_genomes_project 6 46960294 46962110 - Gimap6 protein_coding processed_transcript MGP_WSBEiJ_T0002001.1 MGP_WSBEiJ_G0001921.1 mouse_genomes_project 6 83808347 83813580 - TEC TEC MGP_WSBEiJ_T0005049.1 MGP_WSBEiJ_G0004307.1 mouse_genomes_project 6 150784444 150786002 - Gm44085 antisense antisense MGP_WSBEiJ_T0077301.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042040 87070395 + MGP_WSBEiJ_P0077301 Tia1 protein_coding protein_coding MGP_WSBEiJ_T0077302.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042040 87072599 + MGP_WSBEiJ_P0077302 Tia1 protein_coding protein_coding MGP_WSBEiJ_T0077303.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042056 87042990 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077304.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042103 87044930 + Tia1 protein_coding processed_transcript MGP_WSBEiJ_T0077305.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042112 87055993 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077306.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042117 87057796 + Tia1 protein_coding processed_transcript MGP_WSBEiJ_T0077307.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042117 87066978 + MGP_WSBEiJ_P0077307 Tia1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077308.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042125 87069966 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077309.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042134 87071379 + MGP_WSBEiJ_P0077309 Tia1 protein_coding protein_coding MGP_WSBEiJ_T0077310.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042135 87069965 + MGP_WSBEiJ_P0077310 Tia1 protein_coding protein_coding MGP_WSBEiJ_T0077311.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042138 87067033 + MGP_WSBEiJ_P0077311 Tia1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077312.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042144 87062904 + Tia1 protein_coding processed_transcript MGP_WSBEiJ_T0077313.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042146 87072421 + MGP_WSBEiJ_P0077313 Tia1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077314.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042157 87057842 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077315.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042157 87071374 + MGP_WSBEiJ_P0077315 Tia1 protein_coding protein_coding MGP_WSBEiJ_T0077316.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042181 87057877 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077317.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87042294 87064327 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077318.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87051828 87061160 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077319.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87053792 87056452 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077320.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87057206 87062656 + Tia1 protein_coding processed_transcript MGP_WSBEiJ_T0077321.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87057398 87064551 + Tia1 protein_coding processed_transcript MGP_WSBEiJ_T0077322.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87057898 87062890 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077323.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87057930 87063464 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077324.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87058257 87066995 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077325.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87059982 87063675 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077326.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87062869 87064035 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077327.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87064041 87064741 + Tia1 protein_coding retained_intron MGP_WSBEiJ_T0077328.1 MGP_WSBEiJ_G0030144.1 mouse_genomes_project 6 87064516 87069497 + MGP_WSBEiJ_P0077328 Tia1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075917.1 MGP_WSBEiJ_G0029803.1 mouse_genomes_project 6 39250180 39253165 - MGP_WSBEiJ_P0075917 protein_coding protein_coding MGP_WSBEiJ_T0014857.1 MGP_WSBEiJ_G0012987.1 mouse_genomes_project 6 40482422 40483220 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079576.1 MGP_WSBEiJ_G0030629.1 mouse_genomes_project 6 146077794 146082441 + MGP_WSBEiJ_P0079576 Spx protein_coding protein_coding MGP_WSBEiJ_T0079577.1 MGP_WSBEiJ_G0030629.1 mouse_genomes_project 6 146077794 146082441 + MGP_WSBEiJ_P0079577 Spx protein_coding unknown_likely_coding MGP_WSBEiJ_T0079578.1 MGP_WSBEiJ_G0030629.1 mouse_genomes_project 6 146078367 146083951 + Spx protein_coding retained_intron MGP_WSBEiJ_T0079579.1 MGP_WSBEiJ_G0030629.1 mouse_genomes_project 6 146078892 146083951 + Spx protein_coding retained_intron MGP_WSBEiJ_T0015119.1 MGP_WSBEiJ_G0013249.1 mouse_genomes_project 6 127072284 127072735 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008523.1 MGP_WSBEiJ_G0006896.1 mouse_genomes_project 6 88297334 88298775 + Gm44201 lincRNA lincRNA MGP_WSBEiJ_T0079544.1 MGP_WSBEiJ_G0030622.1 mouse_genomes_project 6 145655288 145699757 - MGP_WSBEiJ_P0079544 Gm6614 protein_coding protein_coding MGP_WSBEiJ_T0079545.1 MGP_WSBEiJ_G0030622.1 mouse_genomes_project 6 145655288 145699757 - MGP_WSBEiJ_P0079545 Gm6614 protein_coding protein_coding MGP_WSBEiJ_T0079546.1 MGP_WSBEiJ_G0030622.1 mouse_genomes_project 6 145655624 145697094 - MGP_WSBEiJ_P0079546 Gm6614 protein_coding protein_coding MGP_WSBEiJ_T0076123.1 MGP_WSBEiJ_G0029869.1 mouse_genomes_project 6 46691229 46748808 + MGP_WSBEiJ_P0076123 Sspo protein_coding protein_coding MGP_WSBEiJ_T0076124.1 MGP_WSBEiJ_G0029869.1 mouse_genomes_project 6 46691229 46748823 + MGP_WSBEiJ_P0076124 Sspo protein_coding protein_coding MGP_WSBEiJ_T0076125.1 MGP_WSBEiJ_G0029869.1 mouse_genomes_project 6 46727025 46733911 + Sspo protein_coding retained_intron MGP_WSBEiJ_T0076126.1 MGP_WSBEiJ_G0029869.1 mouse_genomes_project 6 46734471 46748823 + MGP_WSBEiJ_P0076126 Sspo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076127.1 MGP_WSBEiJ_G0029869.1 mouse_genomes_project 6 46741379 46743806 + MGP_WSBEiJ_P0076127 Sspo protein_coding protein_coding MGP_WSBEiJ_T0008474.1 MGP_WSBEiJ_G0006855.1 mouse_genomes_project 6 52362383 52364560 + Gm16499 lincRNA lincRNA MGP_WSBEiJ_T0008475.1 MGP_WSBEiJ_G0006855.1 mouse_genomes_project 6 52362384 52362450 + Gm16499 lincRNA lincRNA MGP_WSBEiJ_T0008487.1 MGP_WSBEiJ_G0006866.1 mouse_genomes_project 6 66886892 66911625 + Gm42889 lincRNA lincRNA MGP_WSBEiJ_T0002089.1 MGP_WSBEiJ_G0002008.1 mouse_genomes_project 6 119437899 119439100 - TEC TEC MGP_WSBEiJ_T0002126.1 MGP_WSBEiJ_G0002045.1 mouse_genomes_project 6 143902919 143903913 - TEC TEC MGP_WSBEiJ_T0002132.1 MGP_WSBEiJ_G0002051.1 mouse_genomes_project 6 148904731 148907911 - TEC TEC MGP_WSBEiJ_T0000177.1 MGP_WSBEiJ_G0000133.1 mouse_genomes_project 6 68500848 68501615 - MGP_WSBEiJ_P0000177 Igkv1-88 IG_V_gene IG_V_gene MGP_WSBEiJ_T0014923.1 MGP_WSBEiJ_G0013053.1 mouse_genomes_project 6 62424559 62425250 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075214.1 MGP_WSBEiJ_G0029654.1 mouse_genomes_project 6 18869294 18952440 - MGP_WSBEiJ_P0075214 Tspan12 protein_coding protein_coding MGP_WSBEiJ_T0075215.1 MGP_WSBEiJ_G0029654.1 mouse_genomes_project 6 18869294 18952909 - MGP_WSBEiJ_P0075215 Tspan12 protein_coding protein_coding MGP_WSBEiJ_T0075216.1 MGP_WSBEiJ_G0029654.1 mouse_genomes_project 6 18897440 18952333 - MGP_WSBEiJ_P0075216 Tspan12 protein_coding protein_coding MGP_WSBEiJ_T0075217.1 MGP_WSBEiJ_G0029654.1 mouse_genomes_project 6 18901815 18952266 - MGP_WSBEiJ_P0075217 Tspan12 protein_coding protein_coding MGP_WSBEiJ_T0075218.1 MGP_WSBEiJ_G0029654.1 mouse_genomes_project 6 18939735 18952521 - MGP_WSBEiJ_P0075218 Tspan12 protein_coding protein_coding MGP_WSBEiJ_T0075219.1 MGP_WSBEiJ_G0029654.1 mouse_genomes_project 6 18951357 18952180 - MGP_WSBEiJ_P0075219 Tspan12 protein_coding protein_coding MGP_WSBEiJ_T0077623.1 MGP_WSBEiJ_G0030211.1 mouse_genomes_project 6 91417377 91459096 + MGP_WSBEiJ_P0077623 Slc41a3 protein_coding protein_coding MGP_WSBEiJ_T0077624.1 MGP_WSBEiJ_G0030211.1 mouse_genomes_project 6 91431773 91459096 + MGP_WSBEiJ_P0077624 Slc41a3 protein_coding protein_coding MGP_WSBEiJ_T0002037.1 MGP_WSBEiJ_G0001957.1 mouse_genomes_project 6 92004208 92004801 - TEC TEC MGP_WSBEiJ_T0098403.1 MGP_WSBEiJ_G0037066.1 mouse_genomes_project 6 16607184 16607291 + Gm22828 snRNA snRNA MGP_WSBEiJ_T0075905.1 MGP_WSBEiJ_G0029793.1 mouse_genomes_project 6 38779016 38799174 - MGP_WSBEiJ_P0075905 1700074P13Rik protein_coding protein_coding MGP_WSBEiJ_T0075906.1 MGP_WSBEiJ_G0029793.1 mouse_genomes_project 6 38779039 38799234 - MGP_WSBEiJ_P0075906 1700074P13Rik protein_coding protein_coding MGP_WSBEiJ_T0075907.1 MGP_WSBEiJ_G0029793.1 mouse_genomes_project 6 38781062 38789018 - MGP_WSBEiJ_P0075907 1700074P13Rik protein_coding protein_coding MGP_WSBEiJ_T0078775.1 MGP_WSBEiJ_G0030431.1 mouse_genomes_project 6 126839985 126856809 - MGP_WSBEiJ_P0078775 Atn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075256.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20447686 21028980 - MGP_WSBEiJ_P0075256 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075257.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20447686 21028881 - MGP_WSBEiJ_P0075257 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075258.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20447686 21028981 - MGP_WSBEiJ_P0075258 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075259.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20447736 21028785 - MGP_WSBEiJ_P0075259 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075260.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20447751 21028697 - MGP_WSBEiJ_P0075260 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075261.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20447752 21028784 - MGP_WSBEiJ_P0075261 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075262.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20447756 20547357 - Cadps2 protein_coding processed_transcript MGP_WSBEiJ_T0075263.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20448404 20779334 - MGP_WSBEiJ_P0075263 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075264.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20448404 21028703 - MGP_WSBEiJ_P0075264 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075265.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20448409 20502348 - Cadps2 protein_coding processed_transcript MGP_WSBEiJ_T0075266.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20602221 21028823 - MGP_WSBEiJ_P0075266 Cadps2 protein_coding protein_coding MGP_WSBEiJ_T0075267.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20773620 21028860 - Cadps2 protein_coding retained_intron MGP_WSBEiJ_T0075271.1 MGP_WSBEiJ_G0029662.1 mouse_genomes_project 6 20873702 21028822 - Cadps2 protein_coding retained_intron MGP_WSBEiJ_T0097089.1 MGP_WSBEiJ_G0035770.1 mouse_genomes_project 6 143927198 143927302 + n-R5s168 rRNA rRNA MGP_WSBEiJ_T0075444.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27140621 27141338 + MGP_WSBEiJ_P0075444 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075445.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27141053 27245921 + Ahcyl2 protein_coding retained_intron MGP_WSBEiJ_T0075446.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27141102 27292184 + MGP_WSBEiJ_P0075446 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075447.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27141108 27143253 + Ahcyl2 protein_coding retained_intron MGP_WSBEiJ_T0075448.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27141138 27249621 + MGP_WSBEiJ_P0075448 Ahcyl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075449.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27141148 27292190 + MGP_WSBEiJ_P0075449 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075450.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27176497 27262641 + MGP_WSBEiJ_P0075450 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075451.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27232259 27289089 + MGP_WSBEiJ_P0075451 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075452.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27232266 27241738 + MGP_WSBEiJ_P0075452 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075453.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27232268 27249633 + MGP_WSBEiJ_P0075453 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075454.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27232273 27259547 + MGP_WSBEiJ_P0075454 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075455.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27232390 27245921 + Ahcyl2 protein_coding retained_intron MGP_WSBEiJ_T0075456.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27237881 27292178 + MGP_WSBEiJ_P0075456 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075457.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27238186 27262650 + MGP_WSBEiJ_P0075457 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075458.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27238211 27262643 + MGP_WSBEiJ_P0075458 Ahcyl2 protein_coding protein_coding MGP_WSBEiJ_T0075459.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27243888 27250223 + Ahcyl2 protein_coding processed_transcript MGP_WSBEiJ_T0075460.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27249296 27292183 + Ahcyl2 protein_coding retained_intron MGP_WSBEiJ_T0075461.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27255664 27258037 + Ahcyl2 protein_coding retained_intron MGP_WSBEiJ_T0075462.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27272692 27275098 + Ahcyl2 protein_coding retained_intron MGP_WSBEiJ_T0075463.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27275268 27288929 + Ahcyl2 protein_coding retained_intron MGP_WSBEiJ_T0075464.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27281974 27289081 + Ahcyl2 protein_coding processed_transcript MGP_WSBEiJ_T0075465.1 MGP_WSBEiJ_G0029705.1 mouse_genomes_project 6 27282446 27289025 + Ahcyl2 protein_coding processed_transcript MGP_WSBEiJ_T0079265.1 MGP_WSBEiJ_G0030565.1 mouse_genomes_project 6 137060121 137063995 - MGP_WSBEiJ_P0079265 Kap protein_coding protein_coding MGP_WSBEiJ_T0079266.1 MGP_WSBEiJ_G0030565.1 mouse_genomes_project 6 137060224 137063906 - MGP_WSBEiJ_P0079266 Kap protein_coding protein_coding MGP_WSBEiJ_T0078955.1 MGP_WSBEiJ_G0030462.1 mouse_genomes_project 6 127453435 127461511 - MGP_WSBEiJ_P0078955 Ltbr protein_coding protein_coding MGP_WSBEiJ_T0078956.1 MGP_WSBEiJ_G0030462.1 mouse_genomes_project 6 127456744 127457198 - Ltbr protein_coding retained_intron MGP_WSBEiJ_T0078957.1 MGP_WSBEiJ_G0030462.1 mouse_genomes_project 6 127460358 127460891 - Ltbr protein_coding retained_intron MGP_WSBEiJ_T0005008.1 MGP_WSBEiJ_G0004272.1 mouse_genomes_project 6 129342945 129345024 + antisense antisense MGP_WSBEiJ_T0099683.1 MGP_WSBEiJ_G0038346.1 mouse_genomes_project 6 125745628 125745745 - Gm23079 snoRNA snoRNA MGP_WSBEiJ_T0078675.1 MGP_WSBEiJ_G0030404.1 mouse_genomes_project 6 124784212 124798814 + MGP_WSBEiJ_P0078675 Necap1 protein_coding protein_coding MGP_WSBEiJ_T0078676.1 MGP_WSBEiJ_G0030404.1 mouse_genomes_project 6 124784287 124785811 + Necap1 protein_coding processed_transcript MGP_WSBEiJ_T0078677.1 MGP_WSBEiJ_G0030404.1 mouse_genomes_project 6 124784309 124792303 + Necap1 protein_coding retained_intron MGP_WSBEiJ_T0078678.1 MGP_WSBEiJ_G0030404.1 mouse_genomes_project 6 124784319 124791018 + Necap1 protein_coding retained_intron MGP_WSBEiJ_T0075138.1 MGP_WSBEiJ_G0029642.1 mouse_genomes_project 6 14242591 14251451 + MGP_WSBEiJ_P0075138 Cav2 protein_coding protein_coding MGP_WSBEiJ_T0075139.1 MGP_WSBEiJ_G0029642.1 mouse_genomes_project 6 14242732 14244083 + MGP_WSBEiJ_P0075139 Cav2 protein_coding protein_coding MGP_WSBEiJ_T0075140.1 MGP_WSBEiJ_G0029642.1 mouse_genomes_project 6 14242757 14248831 + MGP_WSBEiJ_P0075140 Cav2 protein_coding protein_coding MGP_WSBEiJ_T0075799.1 MGP_WSBEiJ_G0029763.1 mouse_genomes_project 6 36340830 36354838 - MGP_WSBEiJ_P0075799 Klrg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075800.1 MGP_WSBEiJ_G0029763.1 mouse_genomes_project 6 36341797 36354838 - MGP_WSBEiJ_P0075800 Klrg2 protein_coding protein_coding MGP_WSBEiJ_T0075801.1 MGP_WSBEiJ_G0029763.1 mouse_genomes_project 6 36342398 36354847 - MGP_WSBEiJ_P0075801 Klrg2 protein_coding protein_coding MGP_WSBEiJ_T0011463.1 MGP_WSBEiJ_G0009620.1 mouse_genomes_project 6 109883556 109883910 + Gm27813 misc_RNA misc_RNA MGP_WSBEiJ_T0000162.1 MGP_WSBEiJ_G0000124.1 mouse_genomes_project 6 68158766 68159233 + MGP_WSBEiJ_P0000162 Igkv14-100 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000163.1 MGP_WSBEiJ_G0000124.1 mouse_genomes_project 6 68158766 68159233 + MGP_WSBEiJ_P0000163 Igkv14-100 IG_V_gene IG_V_gene MGP_WSBEiJ_T0100930.1 MGP_WSBEiJ_G0039388.1 mouse_genomes_project 6 126159050 126159952 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015067.1 MGP_WSBEiJ_G0013197.1 mouse_genomes_project 6 111488351 111488895 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075056.1 MGP_WSBEiJ_G0029628.1 mouse_genomes_project 6 8716148 8723206 - Ndufa4 protein_coding retained_intron MGP_WSBEiJ_T0075057.1 MGP_WSBEiJ_G0029628.1 mouse_genomes_project 6 8716311 8723142 - MGP_WSBEiJ_P0075057 Ndufa4 protein_coding protein_coding MGP_WSBEiJ_T0000157.1 MGP_WSBEiJ_G0000119.1 mouse_genomes_project 6 67649063 67649543 + MGP_WSBEiJ_P0000157 Igkv14-111 IG_V_gene IG_V_gene MGP_WSBEiJ_T0015154.1 MGP_WSBEiJ_G0013284.1 mouse_genomes_project 6 135486679 135487169 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100894.1 MGP_WSBEiJ_G0039352.1 mouse_genomes_project 6 40900513 41095340 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079709.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150344466 150349493 - MGP_WSBEiJ_P0079709 Asun protein_coding protein_coding MGP_WSBEiJ_T0079710.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150344466 150352178 - MGP_WSBEiJ_P0079710 Asun protein_coding protein_coding MGP_WSBEiJ_T0079711.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150344466 150376644 - MGP_WSBEiJ_P0079711 Asun protein_coding protein_coding MGP_WSBEiJ_T0079712.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150344475 150346214 - Asun protein_coding retained_intron MGP_WSBEiJ_T0079713.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150344765 150345236 - Asun protein_coding retained_intron MGP_WSBEiJ_T0079714.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150344928 150348893 - Asun protein_coding retained_intron MGP_WSBEiJ_T0079715.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150347340 150351090 - Asun protein_coding processed_transcript MGP_WSBEiJ_T0079716.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150348939 150349662 - Asun protein_coding retained_intron MGP_WSBEiJ_T0079717.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150349853 150375073 - MGP_WSBEiJ_P0079717 Asun protein_coding protein_coding MGP_WSBEiJ_T0079718.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150358939 150362266 - Asun protein_coding retained_intron MGP_WSBEiJ_T0079719.1 MGP_WSBEiJ_G0030651.1 mouse_genomes_project 6 150371976 150376589 - Asun protein_coding retained_intron MGP_WSBEiJ_T0075786.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260032 36318574 + MGP_WSBEiJ_P0075786 Luc7l2 protein_coding protein_coding MGP_WSBEiJ_T0075787.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260163 36319922 + MGP_WSBEiJ_P0075787 Luc7l2 protein_coding protein_coding MGP_WSBEiJ_T0075788.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260163 36324581 + MGP_WSBEiJ_P0075788 Luc7l2 protein_coding protein_coding MGP_WSBEiJ_T0075789.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260212 36324579 + MGP_WSBEiJ_P0075789 Luc7l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075790.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260229 36266637 + Luc7l2 protein_coding processed_transcript MGP_WSBEiJ_T0075791.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260229 36266768 + Luc7l2 protein_coding retained_intron MGP_WSBEiJ_T0075792.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260229 36262727 + Luc7l2 protein_coding processed_transcript MGP_WSBEiJ_T0075793.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260501 36323272 + MGP_WSBEiJ_P0075793 Luc7l2 protein_coding protein_coding MGP_WSBEiJ_T0075794.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36260545 36296061 + Luc7l2 protein_coding processed_transcript MGP_WSBEiJ_T0075795.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36264442 36302346 + MGP_WSBEiJ_P0075795 Luc7l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075796.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36266359 36322247 + MGP_WSBEiJ_P0075796 Luc7l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075797.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36267932 36278504 + Luc7l2 protein_coding retained_intron MGP_WSBEiJ_T0075798.1 MGP_WSBEiJ_G0029762.1 mouse_genomes_project 6 36279039 36319560 + Luc7l2 protein_coding retained_intron MGP_WSBEiJ_T0001890.1 MGP_WSBEiJ_G0001810.1 mouse_genomes_project 6 18773362 18777445 + TEC TEC MGP_WSBEiJ_T0077037.1 MGP_WSBEiJ_G0030093.1 mouse_genomes_project 6 83526135 83533145 - MGP_WSBEiJ_P0077037 Wdr54 protein_coding protein_coding MGP_WSBEiJ_T0077039.1 MGP_WSBEiJ_G0030093.1 mouse_genomes_project 6 83529466 83532968 - Wdr54 protein_coding retained_intron MGP_WSBEiJ_T0077040.1 MGP_WSBEiJ_G0030093.1 mouse_genomes_project 6 83529470 83533113 - Wdr54 protein_coding retained_intron MGP_WSBEiJ_T0077041.1 MGP_WSBEiJ_G0030093.1 mouse_genomes_project 6 83530042 83533013 - Wdr54 protein_coding processed_transcript MGP_WSBEiJ_T0077042.1 MGP_WSBEiJ_G0030093.1 mouse_genomes_project 6 83531284 83533145 - MGP_WSBEiJ_P0077042 Wdr54 protein_coding protein_coding MGP_WSBEiJ_T0077043.1 MGP_WSBEiJ_G0030093.1 mouse_genomes_project 6 83531942 83533127 - Wdr54 protein_coding processed_transcript MGP_WSBEiJ_T0076089.1 MGP_WSBEiJ_G0029862.1 mouse_genomes_project 6 46135818 46149497 + MGP_WSBEiJ_P0076089 Zfp212 protein_coding protein_coding MGP_WSBEiJ_T0076090.1 MGP_WSBEiJ_G0029862.1 mouse_genomes_project 6 46141637 46142478 + Zfp212 protein_coding retained_intron MGP_WSBEiJ_T0096836.1 MGP_WSBEiJ_G0035517.1 mouse_genomes_project 6 50717170 50717617 - pseudogene pseudogene MGP_WSBEiJ_T0075373.1 MGP_WSBEiJ_G0029692.1 mouse_genomes_project 6 26614345 26624537 + MGP_WSBEiJ_P0075373 Fam71f2 protein_coding protein_coding MGP_WSBEiJ_T0075374.1 MGP_WSBEiJ_G0029692.1 mouse_genomes_project 6 26615893 26627249 + MGP_WSBEiJ_P0075374 Fam71f2 protein_coding protein_coding MGP_WSBEiJ_T0075375.1 MGP_WSBEiJ_G0029692.1 mouse_genomes_project 6 26615895 26627244 + MGP_WSBEiJ_P0075375 Fam71f2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0001952.1 MGP_WSBEiJ_G0001872.1 mouse_genomes_project 6 55598956 55599628 - TEC TEC MGP_WSBEiJ_T0000274.1 MGP_WSBEiJ_G0000222.1 mouse_genomes_project 6 67632679 67633083 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0008423.1 MGP_WSBEiJ_G0006822.1 mouse_genomes_project 6 31704293 31711459 + Gm13855 lincRNA lincRNA MGP_WSBEiJ_T0076492.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55574792 55616995 - MGP_WSBEiJ_P0076492 Nt5c3 protein_coding protein_coding MGP_WSBEiJ_T0076493.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55574792 55594942 - MGP_WSBEiJ_P0076493 Nt5c3 protein_coding protein_coding MGP_WSBEiJ_T0076494.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55575343 55616882 - MGP_WSBEiJ_P0076494 Nt5c3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076495.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55575376 55616939 - MGP_WSBEiJ_P0076495 Nt5c3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076496.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55577183 55616787 - MGP_WSBEiJ_P0076496 Nt5c3 protein_coding protein_coding MGP_WSBEiJ_T0076497.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55579055 55582271 - Nt5c3 protein_coding retained_intron MGP_WSBEiJ_T0076498.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55583920 55616953 - Nt5c3 protein_coding processed_transcript MGP_WSBEiJ_T0076499.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55585182 55616920 - Nt5c3 protein_coding processed_transcript MGP_WSBEiJ_T0076500.1 MGP_WSBEiJ_G0029957.1 mouse_genomes_project 6 55588176 55594939 - Nt5c3 protein_coding retained_intron MGP_WSBEiJ_T0074982.1 MGP_WSBEiJ_G0029609.1 mouse_genomes_project 6 2149242 2205045 + MGP_WSBEiJ_P0074982 Asb4 protein_coding protein_coding MGP_WSBEiJ_T0074983.1 MGP_WSBEiJ_G0029609.1 mouse_genomes_project 6 2156278 2172989 + MGP_WSBEiJ_P0074983 Asb4 protein_coding protein_coding MGP_WSBEiJ_T0001902.1 MGP_WSBEiJ_G0001822.1 mouse_genomes_project 6 27571767 27573988 + TEC TEC MGP_WSBEiJ_T0015004.1 MGP_WSBEiJ_G0013134.1 mouse_genomes_project 6 85586055 85586812 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079236.1 MGP_WSBEiJ_G0030540.1 mouse_genomes_project 6 134637673 134638603 - MGP_WSBEiJ_P0079236 Tas2r114 protein_coding protein_coding MGP_WSBEiJ_T0077251.1 MGP_WSBEiJ_G0030135.1 mouse_genomes_project 6 86509496 86516104 - protein_coding processed_transcript MGP_WSBEiJ_T0077252.1 MGP_WSBEiJ_G0030135.1 mouse_genomes_project 6 86511122 86516042 - MGP_WSBEiJ_P0077252 protein_coding protein_coding MGP_WSBEiJ_T0076345.1 MGP_WSBEiJ_G0029925.1 mouse_genomes_project 6 50807563 50812445 + MGP_WSBEiJ_P0076345 Evx1 protein_coding protein_coding MGP_WSBEiJ_T0076346.1 MGP_WSBEiJ_G0029925.1 mouse_genomes_project 6 50807617 50810710 + MGP_WSBEiJ_P0076346 Evx1 protein_coding protein_coding MGP_WSBEiJ_T0014822.1 MGP_WSBEiJ_G0012952.1 mouse_genomes_project 6 19890413 19891181 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078836.1 MGP_WSBEiJ_G0030441.1 mouse_genomes_project 6 126964432 126969904 - MGP_WSBEiJ_P0078836 Gpr162 protein_coding protein_coding MGP_WSBEiJ_T0078837.1 MGP_WSBEiJ_G0030441.1 mouse_genomes_project 6 126964435 126969699 - Gpr162 protein_coding retained_intron MGP_WSBEiJ_T0078838.1 MGP_WSBEiJ_G0030441.1 mouse_genomes_project 6 126964436 126969970 - MGP_WSBEiJ_P0078838 Gpr162 protein_coding protein_coding MGP_WSBEiJ_T0078839.1 MGP_WSBEiJ_G0030441.1 mouse_genomes_project 6 126967717 126969699 - Gpr162 protein_coding processed_transcript MGP_WSBEiJ_T0077709.1 MGP_WSBEiJ_G0030226.1 mouse_genomes_project 6 92973905 93052560 + MGP_WSBEiJ_P0077709 Nr2c2 protein_coding protein_coding MGP_WSBEiJ_T0077710.1 MGP_WSBEiJ_G0030226.1 mouse_genomes_project 6 92974948 93046469 + MGP_WSBEiJ_P0077710 Nr2c2 protein_coding protein_coding MGP_WSBEiJ_T0077711.1 MGP_WSBEiJ_G0030226.1 mouse_genomes_project 6 93017429 93019242 + MGP_WSBEiJ_P0077711 Nr2c2 protein_coding protein_coding MGP_WSBEiJ_T0077712.1 MGP_WSBEiJ_G0030226.1 mouse_genomes_project 6 93018029 93021647 + Nr2c2 protein_coding retained_intron MGP_WSBEiJ_T0077713.1 MGP_WSBEiJ_G0030226.1 mouse_genomes_project 6 93019205 93047432 + MGP_WSBEiJ_P0077713 Nr2c2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077714.1 MGP_WSBEiJ_G0030226.1 mouse_genomes_project 6 93024576 93035424 + Nr2c2 protein_coding processed_transcript MGP_WSBEiJ_T0077715.1 MGP_WSBEiJ_G0030226.1 mouse_genomes_project 6 93035794 93037641 + Nr2c2 protein_coding retained_intron MGP_WSBEiJ_T0077716.1 MGP_WSBEiJ_G0030226.1 mouse_genomes_project 6 93043002 93054965 + Nr2c2 protein_coding processed_transcript MGP_WSBEiJ_T0076092.1 MGP_WSBEiJ_G0029864.1 mouse_genomes_project 6 46174080 46186023 + MGP_WSBEiJ_P0076092 Zfp956 protein_coding protein_coding MGP_WSBEiJ_T0076093.1 MGP_WSBEiJ_G0029864.1 mouse_genomes_project 6 46174135 46176951 + Zfp956 protein_coding retained_intron MGP_WSBEiJ_T0076094.1 MGP_WSBEiJ_G0029864.1 mouse_genomes_project 6 46174137 46186020 + MGP_WSBEiJ_P0076094 Zfp956 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077362.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87523081 87682829 + MGP_WSBEiJ_P0077362 Aak1 protein_coding protein_coding MGP_WSBEiJ_T0077363.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87523096 87612038 + MGP_WSBEiJ_P0077363 Aak1 protein_coding protein_coding MGP_WSBEiJ_T0077364.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87523192 87627543 + Aak1 protein_coding retained_intron MGP_WSBEiJ_T0077365.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87523617 87671466 + MGP_WSBEiJ_P0077365 Aak1 protein_coding protein_coding MGP_WSBEiJ_T0077366.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87524749 87612033 + Aak1 protein_coding processed_transcript MGP_WSBEiJ_T0077367.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87636147 87675494 + MGP_WSBEiJ_P0077367 Aak1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077368.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87646402 87675817 + Aak1 protein_coding processed_transcript MGP_WSBEiJ_T0077369.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87664865 87667631 + Aak1 protein_coding retained_intron MGP_WSBEiJ_T0077370.1 MGP_WSBEiJ_G0030153.1 mouse_genomes_project 6 87674608 87676273 + Aak1 protein_coding processed_transcript MGP_WSBEiJ_T0100947.1 MGP_WSBEiJ_G0039404.1 mouse_genomes_project 6 135966246 135967147 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0014791.1 MGP_WSBEiJ_G0012921.1 mouse_genomes_project 6 5190137 5191931 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100906.1 MGP_WSBEiJ_G0039364.1 mouse_genomes_project 6 56939683 56939788 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099675.1 MGP_WSBEiJ_G0038338.1 mouse_genomes_project 6 117161180 117161318 - Gm24008 snoRNA snoRNA MGP_WSBEiJ_T0002008.1 MGP_WSBEiJ_G0001928.1 mouse_genomes_project 6 87245144 87249056 + TEC TEC MGP_WSBEiJ_T0005009.1 MGP_WSBEiJ_G0004273.1 mouse_genomes_project 6 129358684 129361132 + Gm43126 antisense antisense MGP_WSBEiJ_T0098405.1 MGP_WSBEiJ_G0037068.1 mouse_genomes_project 6 23693870 23694010 - Gm24691 snRNA snRNA MGP_WSBEiJ_T0077044.1 MGP_WSBEiJ_G0030094.1 mouse_genomes_project 6 83533151 83539640 + MGP_WSBEiJ_P0077044 1700003E16Rik protein_coding protein_coding MGP_WSBEiJ_T0077045.1 MGP_WSBEiJ_G0030094.1 mouse_genomes_project 6 83533248 83539586 + MGP_WSBEiJ_P0077045 1700003E16Rik protein_coding protein_coding MGP_WSBEiJ_T0076573.1 MGP_WSBEiJ_G0029991.1 mouse_genomes_project 6 57902101 57903945 - MGP_WSBEiJ_P0076573 Nap1l5 protein_coding protein_coding MGP_WSBEiJ_T0076574.1 MGP_WSBEiJ_G0029991.1 mouse_genomes_project 6 57902672 57903542 - MGP_WSBEiJ_P0076574 Nap1l5 protein_coding protein_coding MGP_WSBEiJ_T0002073.1 MGP_WSBEiJ_G0001993.1 mouse_genomes_project 6 113506095 113506651 - TEC TEC MGP_WSBEiJ_T0008616.1 MGP_WSBEiJ_G0006967.1 mouse_genomes_project 6 139052128 139064639 + Gm14329 lincRNA lincRNA MGP_WSBEiJ_T0005040.1 MGP_WSBEiJ_G0004299.1 mouse_genomes_project 6 148403751 148432022 + Sox5os3 antisense antisense MGP_WSBEiJ_T0005041.1 MGP_WSBEiJ_G0004299.1 mouse_genomes_project 6 148413008 148431772 + Sox5os3 antisense antisense MGP_WSBEiJ_T0075803.1 MGP_WSBEiJ_G0029765.1 mouse_genomes_project 6 36422232 36605800 - MGP_WSBEiJ_P0075803 Hipk2 protein_coding protein_coding MGP_WSBEiJ_T0075804.1 MGP_WSBEiJ_G0029765.1 mouse_genomes_project 6 36423659 36605906 - MGP_WSBEiJ_P0075804 Hipk2 protein_coding protein_coding MGP_WSBEiJ_T0075805.1 MGP_WSBEiJ_G0029765.1 mouse_genomes_project 6 36423659 36605954 - MGP_WSBEiJ_P0075805 Hipk2 protein_coding protein_coding MGP_WSBEiJ_T0075806.1 MGP_WSBEiJ_G0029765.1 mouse_genomes_project 6 36463362 36469924 - Hipk2 protein_coding processed_transcript MGP_WSBEiJ_T0075807.1 MGP_WSBEiJ_G0029765.1 mouse_genomes_project 6 36472083 36547497 - Hipk2 protein_coding retained_intron MGP_WSBEiJ_T0075808.1 MGP_WSBEiJ_G0029765.1 mouse_genomes_project 6 36547057 36566453 - Hipk2 protein_coding retained_intron MGP_WSBEiJ_T0005548.1 MGP_WSBEiJ_G0004669.1 mouse_genomes_project 6 88375878 88382783 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0005549.1 MGP_WSBEiJ_G0004669.1 mouse_genomes_project 6 88375926 88384521 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0005550.1 MGP_WSBEiJ_G0004669.1 mouse_genomes_project 6 88375926 88383734 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0075760.1 MGP_WSBEiJ_G0029756.1 mouse_genomes_project 6 35804324 35939689 - MGP_WSBEiJ_P0075760 D630045J12Rik protein_coding protein_coding MGP_WSBEiJ_T0075761.1 MGP_WSBEiJ_G0029756.1 mouse_genomes_project 6 35807166 35829894 - D630045J12Rik protein_coding retained_intron MGP_WSBEiJ_T0075762.1 MGP_WSBEiJ_G0029756.1 mouse_genomes_project 6 35807172 35829837 - D630045J12Rik protein_coding retained_intron MGP_WSBEiJ_T0075763.1 MGP_WSBEiJ_G0029756.1 mouse_genomes_project 6 35818588 35877843 - D630045J12Rik protein_coding retained_intron MGP_WSBEiJ_T0075764.1 MGP_WSBEiJ_G0029756.1 mouse_genomes_project 6 35840578 35851028 - D630045J12Rik protein_coding retained_intron MGP_WSBEiJ_T0075069.1 MGP_WSBEiJ_G0029630.1 mouse_genomes_project 6 9125176 9559117 - MGP_WSBEiJ_P0075069 Thsd7a protein_coding protein_coding MGP_WSBEiJ_T0075070.1 MGP_WSBEiJ_G0029630.1 mouse_genomes_project 6 9130662 9559274 - MGP_WSBEiJ_P0075070 Thsd7a protein_coding protein_coding MGP_WSBEiJ_T0075071.1 MGP_WSBEiJ_G0029630.1 mouse_genomes_project 6 9130702 9131905 - Thsd7a protein_coding retained_intron MGP_WSBEiJ_T0075072.1 MGP_WSBEiJ_G0029630.1 mouse_genomes_project 6 9130924 9233878 - Thsd7a protein_coding processed_transcript MGP_WSBEiJ_T0075073.1 MGP_WSBEiJ_G0029630.1 mouse_genomes_project 6 9135587 9144008 - Thsd7a protein_coding retained_intron MGP_WSBEiJ_T0075074.1 MGP_WSBEiJ_G0029630.1 mouse_genomes_project 6 9278577 9363179 - Thsd7a protein_coding processed_transcript MGP_WSBEiJ_T0078696.1 MGP_WSBEiJ_G0030412.1 mouse_genomes_project 6 125148301 125161472 + MGP_WSBEiJ_P0078696 Clec4d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078697.1 MGP_WSBEiJ_G0030412.1 mouse_genomes_project 6 125148307 125161814 + MGP_WSBEiJ_P0078697 Clec4d protein_coding protein_coding MGP_WSBEiJ_T0078698.1 MGP_WSBEiJ_G0030412.1 mouse_genomes_project 6 125154638 125161261 + Clec4d protein_coding retained_intron MGP_WSBEiJ_T0001982.1 MGP_WSBEiJ_G0001902.1 mouse_genomes_project 6 77665689 77670332 - TEC TEC MGP_WSBEiJ_T0076912.1 MGP_WSBEiJ_G0030065.1 mouse_genomes_project 6 78632992 78635941 + MGP_WSBEiJ_P0076912 Reg2 protein_coding protein_coding MGP_WSBEiJ_T0079201.1 MGP_WSBEiJ_G0030524.1 mouse_genomes_project 6 132224545 132235883 - MGP_WSBEiJ_P0079201 protein_coding protein_coding MGP_WSBEiJ_T0014878.1 MGP_WSBEiJ_G0013008.1 mouse_genomes_project 6 47254559 47255649 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077576.1 MGP_WSBEiJ_G0030191.1 mouse_genomes_project 6 90470870 90471803 + MGP_WSBEiJ_P0077576 Vmn1r40 protein_coding protein_coding MGP_WSBEiJ_T0076591.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60392848 61640046 + MGP_WSBEiJ_P0076591 Ccser1 protein_coding protein_coding MGP_WSBEiJ_T0076592.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60393061 60528964 + Ccser1 protein_coding retained_intron MGP_WSBEiJ_T0076593.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60393062 60528595 + Ccser1 protein_coding retained_intron MGP_WSBEiJ_T0076594.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60526841 61637455 + MGP_WSBEiJ_P0076594 Ccser1 protein_coding protein_coding MGP_WSBEiJ_T0076595.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60529787 60792877 + Ccser1 protein_coding retained_intron MGP_WSBEiJ_T0076596.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60535906 60792639 + Ccser1 protein_coding processed_transcript MGP_WSBEiJ_T0076597.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60592113 61047598 + MGP_WSBEiJ_P0076597 Ccser1 protein_coding protein_coding MGP_WSBEiJ_T0076598.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60592121 60946773 + Ccser1 protein_coding retained_intron MGP_WSBEiJ_T0076599.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60592156 60687807 + Ccser1 protein_coding processed_transcript MGP_WSBEiJ_T0076600.1 MGP_WSBEiJ_G0029998.1 mouse_genomes_project 6 60792540 61057383 + MGP_WSBEiJ_P0076600 Ccser1 protein_coding protein_coding MGP_WSBEiJ_T0001893.1 MGP_WSBEiJ_G0001813.1 mouse_genomes_project 6 24699521 24702311 - TEC TEC MGP_WSBEiJ_T0002621.1 MGP_WSBEiJ_G0002511.1 mouse_genomes_project 6 38999413 38999886 + MGP_WSBEiJ_P0002621 Trbv14 TR_V_gene TR_V_gene MGP_WSBEiJ_T0075207.1 MGP_WSBEiJ_G0029651.1 mouse_genomes_project 6 15843997 15849472 + MGP_WSBEiJ_P0075207 Lsm8 protein_coding protein_coding MGP_WSBEiJ_T0075208.1 MGP_WSBEiJ_G0029651.1 mouse_genomes_project 6 15844059 15851171 + Lsm8 protein_coding retained_intron MGP_WSBEiJ_T0075209.1 MGP_WSBEiJ_G0029651.1 mouse_genomes_project 6 15844074 15845826 + Lsm8 protein_coding retained_intron MGP_WSBEiJ_T0075210.1 MGP_WSBEiJ_G0029651.1 mouse_genomes_project 6 15844086 15849166 + MGP_WSBEiJ_P0075210 Lsm8 protein_coding protein_coding MGP_WSBEiJ_T0001986.1 MGP_WSBEiJ_G0001906.1 mouse_genomes_project 6 77944721 77948763 - TEC TEC MGP_WSBEiJ_T0075023.1 MGP_WSBEiJ_G0029621.1 mouse_genomes_project 6 5010458 5038138 + MGP_WSBEiJ_P0075023 Mios protein_coding protein_coding MGP_WSBEiJ_T0075024.1 MGP_WSBEiJ_G0029621.1 mouse_genomes_project 6 5028490 5038132 + Mios protein_coding retained_intron MGP_WSBEiJ_T0075025.1 MGP_WSBEiJ_G0029621.1 mouse_genomes_project 6 5031360 5038132 + Mios protein_coding retained_intron MGP_WSBEiJ_T0079667.1 MGP_WSBEiJ_G0030643.1 mouse_genomes_project 6 148977855 148982520 + MGP_WSBEiJ_P0079667 Lyrm5 protein_coding protein_coding MGP_WSBEiJ_T0079668.1 MGP_WSBEiJ_G0030643.1 mouse_genomes_project 6 148977877 148983670 + MGP_WSBEiJ_P0079668 Lyrm5 protein_coding protein_coding MGP_WSBEiJ_T0079669.1 MGP_WSBEiJ_G0030643.1 mouse_genomes_project 6 148977877 148983267 + MGP_WSBEiJ_P0079669 Lyrm5 protein_coding protein_coding MGP_WSBEiJ_T0079670.1 MGP_WSBEiJ_G0030643.1 mouse_genomes_project 6 148977891 148981696 + Lyrm5 protein_coding processed_transcript MGP_WSBEiJ_T0079671.1 MGP_WSBEiJ_G0030643.1 mouse_genomes_project 6 148977896 148983267 + MGP_WSBEiJ_P0079671 Lyrm5 protein_coding protein_coding MGP_WSBEiJ_T0079672.1 MGP_WSBEiJ_G0030643.1 mouse_genomes_project 6 148977896 148982500 + MGP_WSBEiJ_P0079672 Lyrm5 protein_coding protein_coding MGP_WSBEiJ_T0079673.1 MGP_WSBEiJ_G0030643.1 mouse_genomes_project 6 148977907 148983267 + MGP_WSBEiJ_P0079673 Lyrm5 protein_coding protein_coding MGP_WSBEiJ_T0079674.1 MGP_WSBEiJ_G0030643.1 mouse_genomes_project 6 148977921 148982463 + MGP_WSBEiJ_P0079674 Lyrm5 protein_coding protein_coding MGP_WSBEiJ_T0079118.1 MGP_WSBEiJ_G0030498.1 mouse_genomes_project 6 131010206 131020386 - MGP_WSBEiJ_P0079118 Klrb1a protein_coding protein_coding MGP_WSBEiJ_T0015009.1 MGP_WSBEiJ_G0013139.1 mouse_genomes_project 6 86521567 86522411 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075213.1 MGP_WSBEiJ_G0029653.1 mouse_genomes_project 6 18292306 18824377 + MGP_WSBEiJ_P0075213 Kcnd2 protein_coding protein_coding MGP_WSBEiJ_T0015150.1 MGP_WSBEiJ_G0013280.1 mouse_genomes_project 6 135041609 135042090 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008490.1 MGP_WSBEiJ_G0006869.1 mouse_genomes_project 6 71171537 71179083 + Gm1070 lincRNA lincRNA MGP_WSBEiJ_T0008527.1 MGP_WSBEiJ_G0006900.1 mouse_genomes_project 6 89891430 89897824 + Gm1965 lincRNA lincRNA MGP_WSBEiJ_T0008528.1 MGP_WSBEiJ_G0006900.1 mouse_genomes_project 6 89891441 89897127 + Gm1965 lincRNA lincRNA MGP_WSBEiJ_T0008529.1 MGP_WSBEiJ_G0006900.1 mouse_genomes_project 6 89891441 89897807 + Gm1965 lincRNA lincRNA MGP_WSBEiJ_T0008530.1 MGP_WSBEiJ_G0006900.1 mouse_genomes_project 6 89891441 89897842 + Gm1965 lincRNA lincRNA MGP_WSBEiJ_T0004999.1 MGP_WSBEiJ_G0004264.1 mouse_genomes_project 6 126581367 126599134 + antisense antisense MGP_WSBEiJ_T0015001.1 MGP_WSBEiJ_G0013131.1 mouse_genomes_project 6 85558227 85559621 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100887.1 MGP_WSBEiJ_G0039345.1 mouse_genomes_project 6 38882241 38882883 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001888.1 MGP_WSBEiJ_G0001808.1 mouse_genomes_project 6 15425648 15427269 - TEC TEC MGP_WSBEiJ_T0077599.1 MGP_WSBEiJ_G0030207.1 mouse_genomes_project 6 91182265 91197827 + MGP_WSBEiJ_P0077599 Zxdc protein_coding protein_coding MGP_WSBEiJ_T0077600.1 MGP_WSBEiJ_G0030207.1 mouse_genomes_project 6 91182267 91216411 + MGP_WSBEiJ_P0077600 Zxdc protein_coding protein_coding MGP_WSBEiJ_T0077601.1 MGP_WSBEiJ_G0030207.1 mouse_genomes_project 6 91182381 91196958 + MGP_WSBEiJ_P0077601 Zxdc protein_coding protein_coding MGP_WSBEiJ_T0077602.1 MGP_WSBEiJ_G0030207.1 mouse_genomes_project 6 91182386 91195848 + MGP_WSBEiJ_P0077602 Zxdc protein_coding protein_coding MGP_WSBEiJ_T0077603.1 MGP_WSBEiJ_G0030207.1 mouse_genomes_project 6 91182391 91187316 + Zxdc protein_coding retained_intron MGP_WSBEiJ_T0075098.1 MGP_WSBEiJ_G0029636.1 mouse_genomes_project 6 10721623 10725409 - MGP_WSBEiJ_P0075098 2610001J05Rik protein_coding protein_coding MGP_WSBEiJ_T0075099.1 MGP_WSBEiJ_G0029636.1 mouse_genomes_project 6 10723688 10725357 - MGP_WSBEiJ_P0075099 2610001J05Rik protein_coding protein_coding MGP_WSBEiJ_T0075100.1 MGP_WSBEiJ_G0029636.1 mouse_genomes_project 6 10723748 10725356 - MGP_WSBEiJ_P0075100 2610001J05Rik protein_coding protein_coding MGP_WSBEiJ_T0075101.1 MGP_WSBEiJ_G0029636.1 mouse_genomes_project 6 10723889 10725356 - MGP_WSBEiJ_P0075101 2610001J05Rik protein_coding protein_coding MGP_WSBEiJ_T0001919.1 MGP_WSBEiJ_G0001839.1 mouse_genomes_project 6 43103667 43107427 + TEC TEC MGP_WSBEiJ_T0076380.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52598394 52628638 + Chn2 protein_coding processed_transcript MGP_WSBEiJ_T0076381.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52598413 52870757 + MGP_WSBEiJ_P0076381 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076382.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52598453 52790250 + MGP_WSBEiJ_P0076382 Chn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076383.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52598879 52792216 + Chn2 protein_coding processed_transcript MGP_WSBEiJ_T0076384.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52598926 52765525 + MGP_WSBEiJ_P0076384 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076385.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52658523 52790217 + Chn2 protein_coding processed_transcript MGP_WSBEiJ_T0076386.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52834466 52870330 + MGP_WSBEiJ_P0076386 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076387.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52836736 52870122 + MGP_WSBEiJ_P0076387 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076388.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52838759 52870428 + MGP_WSBEiJ_P0076388 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076389.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52842083 52871846 + MGP_WSBEiJ_P0076389 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076390.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52842503 52870281 + MGP_WSBEiJ_P0076390 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076391.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52842503 52870281 + MGP_WSBEiJ_P0076391 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076392.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52842503 52870281 + MGP_WSBEiJ_P0076392 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076393.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52842503 52870281 + MGP_WSBEiJ_P0076393 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0076394.1 MGP_WSBEiJ_G0029932.1 mouse_genomes_project 6 52842503 52870281 + MGP_WSBEiJ_P0076394 Chn2 protein_coding protein_coding MGP_WSBEiJ_T0015126.1 MGP_WSBEiJ_G0013256.1 mouse_genomes_project 6 129213355 129214150 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014797.1 MGP_WSBEiJ_G0012927.1 mouse_genomes_project 6 7717400 7723575 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010625.1 MGP_WSBEiJ_G0008782.1 mouse_genomes_project 6 117216278 117216341 + Mir7660 miRNA miRNA MGP_WSBEiJ_T0078329.1 MGP_WSBEiJ_G0030341.1 mouse_genomes_project 6 118060138 118063243 + MGP_WSBEiJ_P0078329 Olfr214 protein_coding protein_coding MGP_WSBEiJ_T0078330.1 MGP_WSBEiJ_G0030341.1 mouse_genomes_project 6 118062235 118063243 + MGP_WSBEiJ_P0078330 Olfr214 protein_coding protein_coding MGP_WSBEiJ_T0004972.1 MGP_WSBEiJ_G0004242.1 mouse_genomes_project 6 109949349 109956038 - Gm44040 antisense antisense MGP_WSBEiJ_T0011433.1 MGP_WSBEiJ_G0009590.1 mouse_genomes_project 6 16337088 16337346 - Gm24213 misc_RNA misc_RNA MGP_WSBEiJ_T0076517.1 MGP_WSBEiJ_G0029972.1 mouse_genomes_project 6 56145592 56146710 + MGP_WSBEiJ_P0076517 Vmn1r19 protein_coding protein_coding MGP_WSBEiJ_T0076823.1 MGP_WSBEiJ_G0030046.1 mouse_genomes_project 6 72346992 72353636 - MGP_WSBEiJ_P0076823 Vamp8 protein_coding protein_coding MGP_WSBEiJ_T0076824.1 MGP_WSBEiJ_G0030046.1 mouse_genomes_project 6 72346997 72352844 - MGP_WSBEiJ_P0076824 Vamp8 protein_coding protein_coding MGP_WSBEiJ_T0015031.1 MGP_WSBEiJ_G0013161.1 mouse_genomes_project 6 96265088 96269294 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008381.1 MGP_WSBEiJ_G0006793.1 mouse_genomes_project 6 13466282 13501114 + Gm43998 lincRNA lincRNA MGP_WSBEiJ_T0008645.1 MGP_WSBEiJ_G0006988.1 mouse_genomes_project 6 152460430 152463370 - Gm6313 lincRNA lincRNA MGP_WSBEiJ_T0008646.1 MGP_WSBEiJ_G0006988.1 mouse_genomes_project 6 152460430 152468552 - Gm6313 lincRNA lincRNA MGP_WSBEiJ_T0002054.1 MGP_WSBEiJ_G0001974.1 mouse_genomes_project 6 100837242 100841000 - TEC TEC MGP_WSBEiJ_T0079804.1 MGP_WSBEiJ_G0030669.1 mouse_genomes_project 6 152059928 152280301 - MGP_WSBEiJ_P0079804 Tmtc1 protein_coding protein_coding MGP_WSBEiJ_T0079805.1 MGP_WSBEiJ_G0030669.1 mouse_genomes_project 6 152059928 152280301 - MGP_WSBEiJ_P0079805 Tmtc1 protein_coding protein_coding MGP_WSBEiJ_T0079806.1 MGP_WSBEiJ_G0030669.1 mouse_genomes_project 6 152074582 152277547 - MGP_WSBEiJ_P0079806 Tmtc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079807.1 MGP_WSBEiJ_G0030669.1 mouse_genomes_project 6 152246653 152277547 - MGP_WSBEiJ_P0079807 Tmtc1 protein_coding protein_coding MGP_WSBEiJ_T0076321.1 MGP_WSBEiJ_G0029918.1 mouse_genomes_project 6 50688881 50691722 - MGP_WSBEiJ_P0076321 Hoxa5 protein_coding protein_coding MGP_WSBEiJ_T0014818.1 MGP_WSBEiJ_G0012948.1 mouse_genomes_project 6 18034293 18034849 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008567.1 MGP_WSBEiJ_G0006930.1 mouse_genomes_project 6 115205784 115206711 + Gm44053 lincRNA lincRNA MGP_WSBEiJ_T0098436.1 MGP_WSBEiJ_G0037099.1 mouse_genomes_project 6 104934056 104934118 + Gm24784 snRNA snRNA MGP_WSBEiJ_T0078684.1 MGP_WSBEiJ_G0030408.1 mouse_genomes_project 6 124929623 124951411 + MGP_WSBEiJ_P0078684 Clec4b1 protein_coding protein_coding MGP_WSBEiJ_T0076867.1 MGP_WSBEiJ_G0030053.1 mouse_genomes_project 6 72605870 72614032 - MGP_WSBEiJ_P0076867 Tgoln1 protein_coding protein_coding MGP_WSBEiJ_T0004995.1 MGP_WSBEiJ_G0004260.1 mouse_genomes_project 6 122651230 122687537 + Gm43915 antisense antisense MGP_WSBEiJ_T0014867.1 MGP_WSBEiJ_G0012997.1 mouse_genomes_project 6 45161071 45162205 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075628.1 MGP_WSBEiJ_G0029731.1 mouse_genomes_project 6 31890075 31906288 + MGP_WSBEiJ_P0075628 Akr1b8 protein_coding protein_coding MGP_WSBEiJ_T0075629.1 MGP_WSBEiJ_G0029731.1 mouse_genomes_project 6 31892070 31903064 + Akr1b8 protein_coding processed_transcript MGP_WSBEiJ_T0011454.1 MGP_WSBEiJ_G0009611.1 mouse_genomes_project 6 50756030 50756201 + Gm27866 misc_RNA misc_RNA MGP_WSBEiJ_T0099640.1 MGP_WSBEiJ_G0038303.1 mouse_genomes_project 6 33569108 33569243 + Gm23273 snoRNA snoRNA MGP_WSBEiJ_T0000181.1 MGP_WSBEiJ_G0000137.1 mouse_genomes_project 6 69446411 69446977 - MGP_WSBEiJ_P0000181 Igkv5-48 IG_V_gene IG_V_gene MGP_WSBEiJ_T0079244.1 MGP_WSBEiJ_G0030546.1 mouse_genomes_project 6 135839453 135840371 - MGP_WSBEiJ_P0079244 Tas2r121 protein_coding protein_coding MGP_WSBEiJ_T0100884.1 MGP_WSBEiJ_G0039342.1 mouse_genomes_project 6 31915423 31916393 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0001929.1 MGP_WSBEiJ_G0001849.1 mouse_genomes_project 6 43583610 43588425 + TEC TEC MGP_WSBEiJ_T0004823.1 MGP_WSBEiJ_G0004143.1 mouse_genomes_project 6 5227173 5252466 - Gm16043 antisense antisense MGP_WSBEiJ_T0076545.1 MGP_WSBEiJ_G0029985.1 mouse_genomes_project 6 57125614 57126563 - MGP_WSBEiJ_P0076545 protein_coding protein_coding MGP_WSBEiJ_T0078954.1 MGP_WSBEiJ_G0030461.1 mouse_genomes_project 6 127420076 127427845 - MGP_WSBEiJ_P0078954 Tuba3a protein_coding protein_coding MGP_WSBEiJ_T0076020.1 MGP_WSBEiJ_G0029841.1 mouse_genomes_project 6 40864703 40865636 + MGP_WSBEiJ_P0076020 Olfr448 protein_coding protein_coding MGP_WSBEiJ_T0008580.1 MGP_WSBEiJ_G0006941.1 mouse_genomes_project 6 119835295 119844726 - Gm30498 lincRNA lincRNA MGP_WSBEiJ_T0010637.1 MGP_WSBEiJ_G0008794.1 mouse_genomes_project 6 130069629 130069689 - Mir7233 miRNA miRNA MGP_WSBEiJ_T0099636.1 MGP_WSBEiJ_G0038299.1 mouse_genomes_project 6 22299121 22299253 - Gm24443 snoRNA snoRNA MGP_WSBEiJ_T0014849.1 MGP_WSBEiJ_G0012979.1 mouse_genomes_project 6 37655433 37656517 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075909.1 MGP_WSBEiJ_G0029795.1 mouse_genomes_project 6 38856165 38860587 - MGP_WSBEiJ_P0075909 protein_coding protein_coding MGP_WSBEiJ_T0011430.1 MGP_WSBEiJ_G0009587.1 mouse_genomes_project 6 14889497 14889634 + Gm27444 misc_RNA misc_RNA MGP_WSBEiJ_T0001955.1 MGP_WSBEiJ_G0001875.1 mouse_genomes_project 6 56628471 56631228 + TEC TEC MGP_WSBEiJ_T0002102.1 MGP_WSBEiJ_G0002021.1 mouse_genomes_project 6 130057642 130059891 - TEC TEC MGP_WSBEiJ_T0078223.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117044645 117064899 - Raf1 protein_coding retained_intron MGP_WSBEiJ_T0078224.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117045147 117109843 - MGP_WSBEiJ_P0078224 Raf1 protein_coding protein_coding MGP_WSBEiJ_T0078225.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117045147 117110514 - MGP_WSBEiJ_P0078225 Raf1 protein_coding protein_coding MGP_WSBEiJ_T0078226.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117045175 117048404 - MGP_WSBEiJ_P0078226 Raf1 protein_coding protein_coding MGP_WSBEiJ_T0078227.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117045819 117046897 - Raf1 protein_coding retained_intron MGP_WSBEiJ_T0078228.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117046172 117050123 - MGP_WSBEiJ_P0078228 Raf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078229.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117046843 117061004 - Raf1 protein_coding retained_intron MGP_WSBEiJ_T0078230.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117048394 117053608 - Raf1 protein_coding retained_intron MGP_WSBEiJ_T0078231.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117048404 117053646 - Raf1 protein_coding retained_intron MGP_WSBEiJ_T0078232.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117050101 117063273 - MGP_WSBEiJ_P0078232 Raf1 protein_coding protein_coding MGP_WSBEiJ_T0078233.1 MGP_WSBEiJ_G0030323.1 mouse_genomes_project 6 117060474 117110514 - Raf1 protein_coding retained_intron MGP_WSBEiJ_T0075904.1 MGP_WSBEiJ_G0029792.1 mouse_genomes_project 6 38756260 38763314 - MGP_WSBEiJ_P0075904 Prss58 protein_coding protein_coding MGP_WSBEiJ_T0077578.1 MGP_WSBEiJ_G0030193.1 mouse_genomes_project 6 90594909 90596007 - MGP_WSBEiJ_P0077578 Vmn1r42 protein_coding protein_coding MGP_WSBEiJ_T0099644.1 MGP_WSBEiJ_G0038307.1 mouse_genomes_project 6 41906324 41906455 + Gm22939 snoRNA snoRNA MGP_WSBEiJ_T0075913.1 MGP_WSBEiJ_G0029799.1 mouse_genomes_project 6 39186149 39190943 - MGP_WSBEiJ_P0075913 Try5 protein_coding protein_coding MGP_WSBEiJ_T0015092.1 MGP_WSBEiJ_G0013222.1 mouse_genomes_project 6 119521758 119522544 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078897.1 MGP_WSBEiJ_G0030451.1 mouse_genomes_project 6 127190044 127204557 + MGP_WSBEiJ_P0078897 Lpar5 protein_coding protein_coding MGP_WSBEiJ_T0078898.1 MGP_WSBEiJ_G0030451.1 mouse_genomes_project 6 127193388 127203893 + MGP_WSBEiJ_P0078898 Lpar5 protein_coding protein_coding MGP_WSBEiJ_T0078899.1 MGP_WSBEiJ_G0030451.1 mouse_genomes_project 6 127193388 127204557 + MGP_WSBEiJ_P0078899 Lpar5 protein_coding protein_coding MGP_WSBEiJ_T0076715.1 MGP_WSBEiJ_G0030027.1 mouse_genomes_project 6 71200664 71215344 + MGP_WSBEiJ_P0076715 Cd8b1 protein_coding protein_coding MGP_WSBEiJ_T0010592.1 MGP_WSBEiJ_G0008749.1 mouse_genomes_project 6 46014036 46014113 - Mir704 miRNA miRNA MGP_WSBEiJ_T0077651.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92045945 92107219 + MGP_WSBEiJ_P0077651 Fbln2 protein_coding protein_coding MGP_WSBEiJ_T0077652.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92045945 92107220 + MGP_WSBEiJ_P0077652 Fbln2 protein_coding protein_coding MGP_WSBEiJ_T0077653.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92046312 92067924 + MGP_WSBEiJ_P0077653 Fbln2 protein_coding protein_coding MGP_WSBEiJ_T0077654.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92046314 92068103 + MGP_WSBEiJ_P0077654 Fbln2 protein_coding protein_coding MGP_WSBEiJ_T0077655.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92046317 92047735 + Fbln2 protein_coding processed_transcript MGP_WSBEiJ_T0077656.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92046321 92068123 + MGP_WSBEiJ_P0077656 Fbln2 protein_coding protein_coding MGP_WSBEiJ_T0077657.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92090728 92092520 + Fbln2 protein_coding retained_intron MGP_WSBEiJ_T0077658.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92091131 92098109 + Fbln2 protein_coding retained_intron MGP_WSBEiJ_T0077659.1 MGP_WSBEiJ_G0030215.1 mouse_genomes_project 6 92100558 92107108 + Fbln2 protein_coding retained_intron MGP_WSBEiJ_T0099685.1 MGP_WSBEiJ_G0038348.1 mouse_genomes_project 6 126073593 126073669 - Gm24843 snoRNA snoRNA MGP_WSBEiJ_T0004891.1 MGP_WSBEiJ_G0004194.1 mouse_genomes_project 6 66317950 66319188 - antisense antisense MGP_WSBEiJ_T0078000.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114685351 114730630 + MGP_WSBEiJ_P0078000 protein_coding protein_coding MGP_WSBEiJ_T0078001.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114685359 114720063 + MGP_WSBEiJ_P0078001 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078002.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114685405 114730625 + MGP_WSBEiJ_P0078002 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078003.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114686941 114705418 + MGP_WSBEiJ_P0078003 protein_coding protein_coding MGP_WSBEiJ_T0078004.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114702490 114718778 + MGP_WSBEiJ_P0078004 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078005.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114704220 114715296 + MGP_WSBEiJ_P0078005 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078006.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114709954 114727191 + MGP_WSBEiJ_P0078006 protein_coding protein_coding MGP_WSBEiJ_T0078007.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114715229 114730157 + MGP_WSBEiJ_P0078007 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078008.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114715260 114730434 + MGP_WSBEiJ_P0078008 protein_coding protein_coding MGP_WSBEiJ_T0078009.1 MGP_WSBEiJ_G0030285.1 mouse_genomes_project 6 114718817 114730325 + MGP_WSBEiJ_P0078009 protein_coding protein_coding MGP_WSBEiJ_T0078679.1 MGP_WSBEiJ_G0030405.1 mouse_genomes_project 6 124825091 124838850 + MGP_WSBEiJ_P0078679 Clec4a1 protein_coding protein_coding MGP_WSBEiJ_T0002612.1 MGP_WSBEiJ_G0002503.1 mouse_genomes_project 6 38909677 38910216 + MGP_WSBEiJ_P0002612 Trbv3 TR_V_gene TR_V_gene MGP_WSBEiJ_T0079105.1 MGP_WSBEiJ_G0030495.1 mouse_genomes_project 6 130804353 130813083 - Fkbp4 protein_coding retained_intron MGP_WSBEiJ_T0079106.1 MGP_WSBEiJ_G0030495.1 mouse_genomes_project 6 130804508 130813083 - MGP_WSBEiJ_P0079106 Fkbp4 protein_coding protein_coding MGP_WSBEiJ_T0079107.1 MGP_WSBEiJ_G0030495.1 mouse_genomes_project 6 130807615 130812546 - MGP_WSBEiJ_P0079107 Fkbp4 protein_coding protein_coding MGP_WSBEiJ_T0079108.1 MGP_WSBEiJ_G0030495.1 mouse_genomes_project 6 130808162 130812059 - MGP_WSBEiJ_P0079108 Fkbp4 protein_coding protein_coding MGP_WSBEiJ_T0079376.1 MGP_WSBEiJ_G0030588.1 mouse_genomes_project 6 140063909 140148501 - MGP_WSBEiJ_P0079376 Gucy2c protein_coding protein_coding MGP_WSBEiJ_T0079377.1 MGP_WSBEiJ_G0030588.1 mouse_genomes_project 6 140063910 140148478 - MGP_WSBEiJ_P0079377 Gucy2c protein_coding protein_coding MGP_WSBEiJ_T0079698.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 149880453 150292804 - MGP_WSBEiJ_P0079698 Itpr2 protein_coding protein_coding MGP_WSBEiJ_T0079699.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 149883634 150292538 - MGP_WSBEiJ_P0079699 Itpr2 protein_coding protein_coding MGP_WSBEiJ_T0079700.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 149892742 149920274 - Itpr2 protein_coding processed_transcript MGP_WSBEiJ_T0079701.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 149955061 150004218 - MGP_WSBEiJ_P0079701 Itpr2 protein_coding protein_coding MGP_WSBEiJ_T0079702.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 149955136 149971767 - Itpr2 protein_coding processed_transcript MGP_WSBEiJ_T0079703.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 150007643 150009145 - Itpr2 protein_coding retained_intron MGP_WSBEiJ_T0079704.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 150065504 150069299 - Itpr2 protein_coding retained_intron MGP_WSBEiJ_T0079705.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 150135741 150178714 - MGP_WSBEiJ_P0079705 Itpr2 protein_coding protein_coding MGP_WSBEiJ_T0079706.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 150152264 150292849 - MGP_WSBEiJ_P0079706 Itpr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079707.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 150161615 150292804 - Itpr2 protein_coding retained_intron MGP_WSBEiJ_T0079708.1 MGP_WSBEiJ_G0030650.1 mouse_genomes_project 6 150205074 150292504 - Itpr2 protein_coding processed_transcript MGP_WSBEiJ_T0014855.1 MGP_WSBEiJ_G0012985.1 mouse_genomes_project 6 39380946 39381322 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015085.1 MGP_WSBEiJ_G0013215.1 mouse_genomes_project 6 117952579 117953099 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000187.1 MGP_WSBEiJ_G0000141.1 mouse_genomes_project 6 69730110 69730620 - MGP_WSBEiJ_P0000187 Igkv18-36 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000188.1 MGP_WSBEiJ_G0000141.1 mouse_genomes_project 6 69730110 69730620 - MGP_WSBEiJ_P0000188 Igkv18-36 IG_V_gene IG_V_gene MGP_WSBEiJ_T0004883.1 MGP_WSBEiJ_G0004186.1 mouse_genomes_project 6 52709979 52714021 - 9530036M11Rik antisense antisense MGP_WSBEiJ_T0098435.1 MGP_WSBEiJ_G0037098.1 mouse_genomes_project 6 104149366 104149474 + Gm26022 snRNA snRNA MGP_WSBEiJ_T0098430.1 MGP_WSBEiJ_G0037093.1 mouse_genomes_project 6 96106701 96106808 - Gm26501 snRNA snRNA MGP_WSBEiJ_T0004990.1 MGP_WSBEiJ_G0004255.1 mouse_genomes_project 6 117276497 117282775 + antisense antisense MGP_WSBEiJ_T0002006.1 MGP_WSBEiJ_G0001926.1 mouse_genomes_project 6 87138382 87141378 + TEC TEC MGP_WSBEiJ_T0078328.1 MGP_WSBEiJ_G0030340.1 mouse_genomes_project 6 117990831 117994101 + MGP_WSBEiJ_P0078328 protein_coding protein_coding MGP_WSBEiJ_T0015173.1 MGP_WSBEiJ_G0013303.1 mouse_genomes_project 6 140061628 140061907 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075033.1 MGP_WSBEiJ_G0029624.1 mouse_genomes_project 6 5063079 5411919 + MGP_WSBEiJ_P0075033 Gm45062 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008651.1 MGP_WSBEiJ_G0006993.1 mouse_genomes_project 6 153094927 153112792 - 1700003I16Rik lincRNA lincRNA MGP_WSBEiJ_T0075722.1 MGP_WSBEiJ_G0029747.1 mouse_genomes_project 6 33974944 34114345 + MGP_WSBEiJ_P0075722 Chrm2 protein_coding protein_coding MGP_WSBEiJ_T0075723.1 MGP_WSBEiJ_G0029747.1 mouse_genomes_project 6 33975055 34034045 + Chrm2 protein_coding processed_transcript MGP_WSBEiJ_T0078268.1 MGP_WSBEiJ_G0030331.1 mouse_genomes_project 6 117384089 117389403 + MGP_WSBEiJ_P0078268 H1foo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078269.1 MGP_WSBEiJ_G0030331.1 mouse_genomes_project 6 117384089 117389408 + MGP_WSBEiJ_P0078269 H1foo protein_coding protein_coding MGP_WSBEiJ_T0078270.1 MGP_WSBEiJ_G0030331.1 mouse_genomes_project 6 117384089 117389403 + MGP_WSBEiJ_P0078270 H1foo protein_coding protein_coding MGP_WSBEiJ_T0078271.1 MGP_WSBEiJ_G0030331.1 mouse_genomes_project 6 117384095 117389093 + MGP_WSBEiJ_P0078271 H1foo protein_coding protein_coding MGP_WSBEiJ_T0078272.1 MGP_WSBEiJ_G0030331.1 mouse_genomes_project 6 117387890 117389397 + MGP_WSBEiJ_P0078272 H1foo protein_coding protein_coding MGP_WSBEiJ_T0015155.1 MGP_WSBEiJ_G0013285.1 mouse_genomes_project 6 135486693 135487168 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011431.1 MGP_WSBEiJ_G0009588.1 mouse_genomes_project 6 14890961 14891081 + Gm27402 misc_RNA misc_RNA MGP_WSBEiJ_T0010603.1 MGP_WSBEiJ_G0008760.1 mouse_genomes_project 6 82222312 82222386 - Mir7232 miRNA miRNA MGP_WSBEiJ_T0002069.1 MGP_WSBEiJ_G0001989.1 mouse_genomes_project 6 104951504 104954772 + TEC TEC MGP_WSBEiJ_T0077015.1 MGP_WSBEiJ_G0030089.1 mouse_genomes_project 6 83489339 83492742 + MGP_WSBEiJ_P0077015 Mogs protein_coding protein_coding MGP_WSBEiJ_T0077016.1 MGP_WSBEiJ_G0030089.1 mouse_genomes_project 6 83490359 83491195 + Mogs protein_coding retained_intron MGP_WSBEiJ_T0000275.1 MGP_WSBEiJ_G0000223.1 mouse_genomes_project 6 67654490 67654955 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0015172.1 MGP_WSBEiJ_G0013302.1 mouse_genomes_project 6 139845920 139846314 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076264.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48626153 48718948 - MGP_WSBEiJ_P0076264 Osbpl3 protein_coding protein_coding MGP_WSBEiJ_T0076265.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48628003 48633176 - Osbpl3 protein_coding retained_intron MGP_WSBEiJ_T0076266.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48628509 48706368 - MGP_WSBEiJ_P0076266 Osbpl3 protein_coding protein_coding MGP_WSBEiJ_T0076267.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48629627 48798301 - MGP_WSBEiJ_P0076267 Osbpl3 protein_coding protein_coding MGP_WSBEiJ_T0076268.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48629633 48706471 - MGP_WSBEiJ_P0076268 Osbpl3 protein_coding protein_coding MGP_WSBEiJ_T0076269.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48633035 48718948 - Osbpl3 protein_coding retained_intron MGP_WSBEiJ_T0076270.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48661813 48688113 - MGP_WSBEiJ_P0076270 Osbpl3 protein_coding protein_coding MGP_WSBEiJ_T0076271.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48684240 48798292 - MGP_WSBEiJ_P0076271 Osbpl3 protein_coding protein_coding MGP_WSBEiJ_T0076272.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48688975 48733251 - MGP_WSBEiJ_P0076272 Osbpl3 protein_coding protein_coding MGP_WSBEiJ_T0076273.1 MGP_WSBEiJ_G0029904.1 mouse_genomes_project 6 48748324 48798332 - Osbpl3 protein_coding processed_transcript MGP_WSBEiJ_T0098422.1 MGP_WSBEiJ_G0037085.1 mouse_genomes_project 6 65287970 65288070 - Gm23625 snRNA snRNA MGP_WSBEiJ_T0002005.1 MGP_WSBEiJ_G0001925.1 mouse_genomes_project 6 86888319 86890679 - TEC TEC MGP_WSBEiJ_T0077717.1 MGP_WSBEiJ_G0030227.1 mouse_genomes_project 6 93050816 93064699 - MGP_WSBEiJ_P0077717 Mrps25 protein_coding protein_coding MGP_WSBEiJ_T0077718.1 MGP_WSBEiJ_G0030227.1 mouse_genomes_project 6 93055508 93056573 - Mrps25 protein_coding retained_intron MGP_WSBEiJ_T0077719.1 MGP_WSBEiJ_G0030227.1 mouse_genomes_project 6 93058982 93064637 - Mrps25 protein_coding retained_intron MGP_WSBEiJ_T0076716.1 MGP_WSBEiJ_G0030028.1 mouse_genomes_project 6 71252704 71257892 + Cd8a protein_coding retained_intron MGP_WSBEiJ_T0076717.1 MGP_WSBEiJ_G0030028.1 mouse_genomes_project 6 71252709 71257196 + MGP_WSBEiJ_P0076717 Cd8a protein_coding protein_coding MGP_WSBEiJ_T0014862.1 MGP_WSBEiJ_G0012992.1 mouse_genomes_project 6 42673104 42673249 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002028.1 MGP_WSBEiJ_G0001948.1 mouse_genomes_project 6 89477349 89480524 + TEC TEC MGP_WSBEiJ_T0014847.1 MGP_WSBEiJ_G0012977.1 mouse_genomes_project 6 37452899 37453415 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077339.1 MGP_WSBEiJ_G0030148.1 mouse_genomes_project 6 87285631 87287178 + MGP_WSBEiJ_P0077339 Asprv1 protein_coding protein_coding MGP_WSBEiJ_T0014925.1 MGP_WSBEiJ_G0013055.1 mouse_genomes_project 6 64179610 64180280 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010599.1 MGP_WSBEiJ_G0008756.1 mouse_genomes_project 6 54180363 54180473 + Gm44352 miRNA miRNA MGP_WSBEiJ_T0100918.1 MGP_WSBEiJ_G0039376.1 mouse_genomes_project 6 73461897 73462801 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0004901.1 MGP_WSBEiJ_G0004201.1 mouse_genomes_project 6 72707450 72713335 + Gm15402 antisense antisense MGP_WSBEiJ_T0077029.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83510628 83526333 + MGP_WSBEiJ_P0077029 Rtkn protein_coding protein_coding MGP_WSBEiJ_T0077030.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83510977 83529336 + MGP_WSBEiJ_P0077030 Rtkn protein_coding protein_coding MGP_WSBEiJ_T0077031.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83512218 83529336 + MGP_WSBEiJ_P0077031 Rtkn protein_coding protein_coding MGP_WSBEiJ_T0077032.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83512239 83529336 + MGP_WSBEiJ_P0077032 Rtkn protein_coding protein_coding MGP_WSBEiJ_T0077033.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83519183 83524929 + MGP_WSBEiJ_P0077033 Rtkn protein_coding protein_coding MGP_WSBEiJ_T0077034.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83519329 83529341 + MGP_WSBEiJ_P0077034 Rtkn protein_coding unknown_likely_coding MGP_WSBEiJ_T0077035.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83519355 83524451 + MGP_WSBEiJ_P0077035 Rtkn protein_coding protein_coding MGP_WSBEiJ_T0077036.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83524610 83527015 + Rtkn protein_coding retained_intron MGP_WSBEiJ_T0077038.1 MGP_WSBEiJ_G0030092.1 mouse_genomes_project 6 83527511 83528965 + Rtkn protein_coding retained_intron MGP_WSBEiJ_T0076882.1 MGP_WSBEiJ_G0030058.1 mouse_genomes_project 6 73293025 73325280 + MGP_WSBEiJ_P0076882 Suclg1 protein_coding protein_coding MGP_WSBEiJ_T0076883.1 MGP_WSBEiJ_G0030058.1 mouse_genomes_project 6 73293295 73311830 + MGP_WSBEiJ_P0076883 Suclg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076884.1 MGP_WSBEiJ_G0030058.1 mouse_genomes_project 6 73293303 73325273 + MGP_WSBEiJ_P0076884 Suclg1 protein_coding protein_coding MGP_WSBEiJ_T0076885.1 MGP_WSBEiJ_G0030058.1 mouse_genomes_project 6 73293304 73302079 + Suclg1 protein_coding processed_transcript MGP_WSBEiJ_T0076886.1 MGP_WSBEiJ_G0030058.1 mouse_genomes_project 6 73293311 73310602 + Suclg1 protein_coding retained_intron MGP_WSBEiJ_T0076887.1 MGP_WSBEiJ_G0030058.1 mouse_genomes_project 6 73304827 73311826 + Suclg1 protein_coding retained_intron MGP_WSBEiJ_T0004875.1 MGP_WSBEiJ_G0004182.1 mouse_genomes_project 6 50657940 50678674 + Hoxaas3 antisense antisense MGP_WSBEiJ_T0004876.1 MGP_WSBEiJ_G0004182.1 mouse_genomes_project 6 50657958 50702180 + Hoxaas3 antisense antisense MGP_WSBEiJ_T0004879.1 MGP_WSBEiJ_G0004182.1 mouse_genomes_project 6 50688251 50700719 + Hoxaas3 antisense antisense MGP_WSBEiJ_T0075521.1 MGP_WSBEiJ_G0029712.1 mouse_genomes_project 6 27930747 27941935 + MGP_WSBEiJ_P0075521 Ssmem1 protein_coding protein_coding MGP_WSBEiJ_T0075522.1 MGP_WSBEiJ_G0029712.1 mouse_genomes_project 6 27933175 27941936 + MGP_WSBEiJ_P0075522 Ssmem1 protein_coding protein_coding MGP_WSBEiJ_T0075523.1 MGP_WSBEiJ_G0029712.1 mouse_genomes_project 6 27934590 27941226 + MGP_WSBEiJ_P0075523 Ssmem1 protein_coding protein_coding MGP_WSBEiJ_T0079731.1 MGP_WSBEiJ_G0030654.1 mouse_genomes_project 6 150443190 150454612 + Med21 protein_coding processed_transcript MGP_WSBEiJ_T0079732.1 MGP_WSBEiJ_G0030654.1 mouse_genomes_project 6 150443190 150454612 + MGP_WSBEiJ_P0079732 Med21 protein_coding protein_coding MGP_WSBEiJ_T0079733.1 MGP_WSBEiJ_G0030654.1 mouse_genomes_project 6 150443222 150444620 + Med21 protein_coding retained_intron MGP_WSBEiJ_T0079734.1 MGP_WSBEiJ_G0030654.1 mouse_genomes_project 6 150443223 150453543 + MGP_WSBEiJ_P0079734 Med21 protein_coding protein_coding MGP_WSBEiJ_T0079735.1 MGP_WSBEiJ_G0030654.1 mouse_genomes_project 6 150443224 150454612 + Med21 protein_coding processed_transcript MGP_WSBEiJ_T0079736.1 MGP_WSBEiJ_G0030654.1 mouse_genomes_project 6 150443234 150454743 + MGP_WSBEiJ_P0079736 Med21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079737.1 MGP_WSBEiJ_G0030654.1 mouse_genomes_project 6 150447840 150454612 + Med21 protein_coding retained_intron MGP_WSBEiJ_T0075192.1 MGP_WSBEiJ_G0029649.1 mouse_genomes_project 6 15158000 15319871 + MGP_WSBEiJ_P0075192 Cftr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075193.1 MGP_WSBEiJ_G0029649.1 mouse_genomes_project 6 15158000 15319872 + MGP_WSBEiJ_P0075193 Cftr protein_coding protein_coding MGP_WSBEiJ_T0075194.1 MGP_WSBEiJ_G0029649.1 mouse_genomes_project 6 15158000 15319871 + MGP_WSBEiJ_P0075194 Cftr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075195.1 MGP_WSBEiJ_G0029649.1 mouse_genomes_project 6 15158084 15228515 + MGP_WSBEiJ_P0075195 Cftr protein_coding protein_coding MGP_WSBEiJ_T0075196.1 MGP_WSBEiJ_G0029649.1 mouse_genomes_project 6 15158137 15318137 + MGP_WSBEiJ_P0075196 Cftr protein_coding protein_coding MGP_WSBEiJ_T0075197.1 MGP_WSBEiJ_G0029649.1 mouse_genomes_project 6 15249094 15260762 + Cftr protein_coding retained_intron MGP_WSBEiJ_T0075426.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26892865 26963879 - MGP_WSBEiJ_P0075426 Tnpo3 protein_coding protein_coding MGP_WSBEiJ_T0075427.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26892865 26963599 - MGP_WSBEiJ_P0075427 Tnpo3 protein_coding protein_coding MGP_WSBEiJ_T0075428.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26892925 26912025 - MGP_WSBEiJ_P0075428 Tnpo3 protein_coding protein_coding MGP_WSBEiJ_T0075430.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26893513 26963803 - MGP_WSBEiJ_P0075430 Tnpo3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075431.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26906805 26908996 - Tnpo3 protein_coding retained_intron MGP_WSBEiJ_T0075432.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26916807 26963615 - Tnpo3 protein_coding retained_intron MGP_WSBEiJ_T0075433.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26920861 26923940 - Tnpo3 protein_coding retained_intron MGP_WSBEiJ_T0075434.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26932784 26936595 - Tnpo3 protein_coding retained_intron MGP_WSBEiJ_T0075435.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26934285 26963811 - Tnpo3 protein_coding retained_intron MGP_WSBEiJ_T0075436.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26937551 26963626 - Tnpo3 protein_coding retained_intron MGP_WSBEiJ_T0075437.1 MGP_WSBEiJ_G0029702.1 mouse_genomes_project 6 26943296 26963605 - Tnpo3 protein_coding processed_transcript MGP_WSBEiJ_T0077436.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88551458 88559936 - MGP_WSBEiJ_P0077436 Cnbp protein_coding protein_coding MGP_WSBEiJ_T0077437.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88551458 88559936 - MGP_WSBEiJ_P0077437 Cnbp protein_coding protein_coding MGP_WSBEiJ_T0077438.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88551925 88559910 - MGP_WSBEiJ_P0077438 Cnbp protein_coding protein_coding MGP_WSBEiJ_T0077439.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88551925 88559860 - MGP_WSBEiJ_P0077439 Cnbp protein_coding protein_coding MGP_WSBEiJ_T0077440.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88552730 88559890 - MGP_WSBEiJ_P0077440 Cnbp protein_coding protein_coding MGP_WSBEiJ_T0077441.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88552762 88559857 - Cnbp protein_coding retained_intron MGP_WSBEiJ_T0077442.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88552782 88559852 - Cnbp protein_coding retained_intron MGP_WSBEiJ_T0077443.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88552843 88559889 - Cnbp protein_coding retained_intron MGP_WSBEiJ_T0077444.1 MGP_WSBEiJ_G0030170.1 mouse_genomes_project 6 88554372 88555154 - Cnbp protein_coding retained_intron MGP_WSBEiJ_T0075621.1 MGP_WSBEiJ_G0029730.1 mouse_genomes_project 6 31834705 31841695 - Akr1b3 protein_coding retained_intron MGP_WSBEiJ_T0075622.1 MGP_WSBEiJ_G0029730.1 mouse_genomes_project 6 31836202 31852818 - MGP_WSBEiJ_P0075622 Akr1b3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0075623.1 MGP_WSBEiJ_G0029730.1 mouse_genomes_project 6 31836209 31840925 - Akr1b3 protein_coding retained_intron MGP_WSBEiJ_T0075624.1 MGP_WSBEiJ_G0029730.1 mouse_genomes_project 6 31836209 31852795 - MGP_WSBEiJ_P0075624 Akr1b3 protein_coding protein_coding MGP_WSBEiJ_T0075625.1 MGP_WSBEiJ_G0029730.1 mouse_genomes_project 6 31841860 31852758 - Akr1b3 protein_coding retained_intron MGP_WSBEiJ_T0075626.1 MGP_WSBEiJ_G0029730.1 mouse_genomes_project 6 31844030 31852747 - Akr1b3 protein_coding retained_intron MGP_WSBEiJ_T0075627.1 MGP_WSBEiJ_G0029730.1 mouse_genomes_project 6 31845922 31852776 - MGP_WSBEiJ_P0075627 Akr1b3 protein_coding protein_coding MGP_WSBEiJ_T0001904.1 MGP_WSBEiJ_G0001824.1 mouse_genomes_project 6 28570899 28573191 - TEC TEC MGP_WSBEiJ_T0096835.1 MGP_WSBEiJ_G0035516.1 mouse_genomes_project 6 45642105 45642650 - pseudogene pseudogene MGP_WSBEiJ_T0015081.1 MGP_WSBEiJ_G0013211.1 mouse_genomes_project 6 116162103 116162491 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014816.1 MGP_WSBEiJ_G0012946.1 mouse_genomes_project 6 16318404 16320301 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078384.1 MGP_WSBEiJ_G0030353.1 mouse_genomes_project 6 119644032 119666232 - Csgalnact2 protein_coding retained_intron MGP_WSBEiJ_T0078385.1 MGP_WSBEiJ_G0030353.1 mouse_genomes_project 6 119644032 119675756 - MGP_WSBEiJ_P0078385 Csgalnact2 protein_coding protein_coding MGP_WSBEiJ_T0078386.1 MGP_WSBEiJ_G0030353.1 mouse_genomes_project 6 119645916 119662958 - MGP_WSBEiJ_P0078386 Csgalnact2 protein_coding protein_coding MGP_WSBEiJ_T0075278.1 MGP_WSBEiJ_G0029668.1 mouse_genomes_project 6 21727768 21731967 - Ndufa5 protein_coding retained_intron MGP_WSBEiJ_T0075279.1 MGP_WSBEiJ_G0029668.1 mouse_genomes_project 6 21727768 21736671 - MGP_WSBEiJ_P0075279 Ndufa5 protein_coding protein_coding MGP_WSBEiJ_T0075280.1 MGP_WSBEiJ_G0029668.1 mouse_genomes_project 6 21727768 21737114 - MGP_WSBEiJ_P0075280 Ndufa5 protein_coding protein_coding MGP_WSBEiJ_T0075281.1 MGP_WSBEiJ_G0029668.1 mouse_genomes_project 6 21727769 21736627 - Ndufa5 protein_coding processed_transcript MGP_WSBEiJ_T0099635.1 MGP_WSBEiJ_G0038298.1 mouse_genomes_project 6 22112049 22112180 - Gm22267 snoRNA snoRNA MGP_WSBEiJ_T0078810.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126918343 126932819 - MGP_WSBEiJ_P0078810 Usp5 protein_coding protein_coding MGP_WSBEiJ_T0078811.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126918362 126932770 - MGP_WSBEiJ_P0078811 Usp5 protein_coding protein_coding MGP_WSBEiJ_T0078812.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126918744 126921972 - Usp5 protein_coding retained_intron MGP_WSBEiJ_T0078813.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126920580 126921228 - Usp5 protein_coding retained_intron MGP_WSBEiJ_T0078814.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126925109 126926804 - Usp5 protein_coding retained_intron MGP_WSBEiJ_T0078815.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126925953 126932743 - MGP_WSBEiJ_P0078815 Usp5 protein_coding protein_coding MGP_WSBEiJ_T0078816.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126926061 126926958 - Usp5 protein_coding retained_intron MGP_WSBEiJ_T0078817.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126926177 126927535 - Usp5 protein_coding retained_intron MGP_WSBEiJ_T0078818.1 MGP_WSBEiJ_G0030437.1 mouse_genomes_project 6 126927470 126932230 - MGP_WSBEiJ_P0078818 Usp5 protein_coding protein_coding MGP_WSBEiJ_T0075533.1 MGP_WSBEiJ_G0029715.1 mouse_genomes_project 6 28036615 28057811 + MGP_WSBEiJ_P0075533 Cpa5 protein_coding protein_coding MGP_WSBEiJ_T0075534.1 MGP_WSBEiJ_G0029715.1 mouse_genomes_project 6 28036656 28057586 + MGP_WSBEiJ_P0075534 Cpa5 protein_coding protein_coding MGP_WSBEiJ_T0075535.1 MGP_WSBEiJ_G0029715.1 mouse_genomes_project 6 28037799 28057809 + MGP_WSBEiJ_P0075535 Cpa5 protein_coding protein_coding MGP_WSBEiJ_T0075536.1 MGP_WSBEiJ_G0029715.1 mouse_genomes_project 6 28038166 28057502 + MGP_WSBEiJ_P0075536 Cpa5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0014865.1 MGP_WSBEiJ_G0012995.1 mouse_genomes_project 6 44728748 44729748 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014838.1 MGP_WSBEiJ_G0012968.1 mouse_genomes_project 6 32373529 32373726 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098426.1 MGP_WSBEiJ_G0037089.1 mouse_genomes_project 6 79152713 79152875 + Gm23727 snRNA snRNA MGP_WSBEiJ_T0076315.1 MGP_WSBEiJ_G0029915.1 mouse_genomes_project 6 50651816 50700229 - MGP_WSBEiJ_P0076315 Hoxa3 protein_coding protein_coding MGP_WSBEiJ_T0076316.1 MGP_WSBEiJ_G0029915.1 mouse_genomes_project 6 50655321 50668417 - MGP_WSBEiJ_P0076316 Hoxa3 protein_coding protein_coding MGP_WSBEiJ_T0076318.1 MGP_WSBEiJ_G0029915.1 mouse_genomes_project 6 50665085 50669436 - Hoxa3 protein_coding processed_transcript MGP_WSBEiJ_T0076320.1 MGP_WSBEiJ_G0029915.1 mouse_genomes_project 6 50686270 50700450 - Hoxa3 protein_coding retained_intron MGP_WSBEiJ_T0010620.1 MGP_WSBEiJ_G0008777.1 mouse_genomes_project 6 109917924 109917985 + Mir7661 miRNA miRNA MGP_WSBEiJ_T0010580.1 MGP_WSBEiJ_G0008737.1 mouse_genomes_project 6 26744214 26744303 + Gm26220 miRNA miRNA MGP_WSBEiJ_T0004839.1 MGP_WSBEiJ_G0004153.1 mouse_genomes_project 6 27997988 28000872 - Gm13781 antisense antisense MGP_WSBEiJ_T0014827.1 MGP_WSBEiJ_G0012957.1 mouse_genomes_project 6 22053759 22054589 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077253.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86512286 86515663 + Tprkb protein_coding processed_transcript MGP_WSBEiJ_T0077254.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86512298 86529926 + MGP_WSBEiJ_P0077254 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0077255.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86512312 86516049 + Tprkb protein_coding processed_transcript MGP_WSBEiJ_T0077256.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86512328 86525370 + Tprkb protein_coding processed_transcript MGP_WSBEiJ_T0077257.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86514519 86516483 + Tprkb protein_coding retained_intron MGP_WSBEiJ_T0077258.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516156 86528601 + MGP_WSBEiJ_P0077258 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0077259.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516175 86531277 + MGP_WSBEiJ_P0077259 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0077260.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516175 86529088 + MGP_WSBEiJ_P0077260 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0077261.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516184 86531275 + MGP_WSBEiJ_P0077261 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0077262.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516184 86529513 + MGP_WSBEiJ_P0077262 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0077263.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516192 86530018 + MGP_WSBEiJ_P0077263 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0077264.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516193 86525609 + Tprkb protein_coding processed_transcript MGP_WSBEiJ_T0077265.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516194 86528884 + MGP_WSBEiJ_P0077265 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0077266.1 MGP_WSBEiJ_G0030136.1 mouse_genomes_project 6 86516235 86528933 + MGP_WSBEiJ_P0077266 Tprkb protein_coding protein_coding MGP_WSBEiJ_T0079396.1 MGP_WSBEiJ_G0030595.1 mouse_genomes_project 6 140281469 140284882 - MGP_WSBEiJ_P0079396 Mgp protein_coding protein_coding MGP_WSBEiJ_T0079397.1 MGP_WSBEiJ_G0030595.1 mouse_genomes_project 6 140282745 140284840 - Mgp protein_coding retained_intron MGP_WSBEiJ_T0078588.1 MGP_WSBEiJ_G0030386.1 mouse_genomes_project 6 123009437 123052213 + MGP_WSBEiJ_P0078588 Slc6a13 protein_coding protein_coding MGP_WSBEiJ_T0078589.1 MGP_WSBEiJ_G0030386.1 mouse_genomes_project 6 123009499 123048071 + Slc6a13 protein_coding retained_intron MGP_WSBEiJ_T0078590.1 MGP_WSBEiJ_G0030386.1 mouse_genomes_project 6 123009499 123012410 + Slc6a13 protein_coding retained_intron MGP_WSBEiJ_T0078591.1 MGP_WSBEiJ_G0030386.1 mouse_genomes_project 6 123009993 123038778 + MGP_WSBEiJ_P0078591 Slc6a13 protein_coding protein_coding MGP_WSBEiJ_T0078699.1 MGP_WSBEiJ_G0030413.1 mouse_genomes_project 6 125167490 125174824 - MGP_WSBEiJ_P0078699 Clec4e protein_coding protein_coding MGP_WSBEiJ_T0078700.1 MGP_WSBEiJ_G0030413.1 mouse_genomes_project 6 125167650 125174822 - Clec4e protein_coding retained_intron MGP_WSBEiJ_T0078701.1 MGP_WSBEiJ_G0030413.1 mouse_genomes_project 6 125167846 125174824 - Clec4e protein_coding retained_intron MGP_WSBEiJ_T0078702.1 MGP_WSBEiJ_G0030413.1 mouse_genomes_project 6 125168369 125174824 - Clec4e protein_coding retained_intron MGP_WSBEiJ_T0078703.1 MGP_WSBEiJ_G0030413.1 mouse_genomes_project 6 125169199 125174824 - MGP_WSBEiJ_P0078703 Clec4e protein_coding protein_coding MGP_WSBEiJ_T0078704.1 MGP_WSBEiJ_G0030413.1 mouse_genomes_project 6 125169402 125174819 - MGP_WSBEiJ_P0078704 Clec4e protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078705.1 MGP_WSBEiJ_G0030413.1 mouse_genomes_project 6 125172737 125174824 - Clec4e protein_coding processed_transcript MGP_WSBEiJ_T0078583.1 MGP_WSBEiJ_G0030384.1 mouse_genomes_project 6 122912959 122930830 + MGP_WSBEiJ_P0078583 Tuba8 protein_coding protein_coding MGP_WSBEiJ_T0075094.1 MGP_WSBEiJ_G0029635.1 mouse_genomes_project 6 10687398 10692844 - MGP_WSBEiJ_P0075094 Gpr85 protein_coding protein_coding MGP_WSBEiJ_T0075095.1 MGP_WSBEiJ_G0029635.1 mouse_genomes_project 6 10688014 10691369 - MGP_WSBEiJ_P0075095 Gpr85 protein_coding protein_coding MGP_WSBEiJ_T0075096.1 MGP_WSBEiJ_G0029635.1 mouse_genomes_project 6 10688023 10690189 - MGP_WSBEiJ_P0075096 Gpr85 protein_coding protein_coding MGP_WSBEiJ_T0075097.1 MGP_WSBEiJ_G0029635.1 mouse_genomes_project 6 10691021 10692397 - Gpr85 protein_coding processed_transcript MGP_WSBEiJ_T0079246.1 MGP_WSBEiJ_G0030548.1 mouse_genomes_project 6 135878590 135879623 - MGP_WSBEiJ_P0079246 Tas2r115 protein_coding protein_coding MGP_WSBEiJ_T0075236.1 MGP_WSBEiJ_G0029657.1 mouse_genomes_project 6 19422986 19428325 + MGP_WSBEiJ_P0075236 Wnt16 protein_coding protein_coding MGP_WSBEiJ_T0075237.1 MGP_WSBEiJ_G0029657.1 mouse_genomes_project 6 19422989 19433538 + MGP_WSBEiJ_P0075237 Wnt16 protein_coding protein_coding MGP_WSBEiJ_T0075238.1 MGP_WSBEiJ_G0029657.1 mouse_genomes_project 6 19423047 19429331 + MGP_WSBEiJ_P0075238 Wnt16 protein_coding protein_coding MGP_WSBEiJ_T0075239.1 MGP_WSBEiJ_G0029657.1 mouse_genomes_project 6 19423621 19432843 + MGP_WSBEiJ_P0075239 Wnt16 protein_coding protein_coding MGP_WSBEiJ_T0074957.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1647872 1916723 + MGP_WSBEiJ_P0074957 Ppp1r9a protein_coding protein_coding MGP_WSBEiJ_T0074958.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1647929 1833381 + MGP_WSBEiJ_P0074958 Ppp1r9a protein_coding protein_coding MGP_WSBEiJ_T0074959.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1647973 1917354 + MGP_WSBEiJ_P0074959 Ppp1r9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074960.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1648514 1651527 + MGP_WSBEiJ_P0074960 Ppp1r9a protein_coding protein_coding MGP_WSBEiJ_T0074961.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1649965 1921645 + Ppp1r9a protein_coding retained_intron MGP_WSBEiJ_T0074962.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1649965 1922784 + MGP_WSBEiJ_P0074962 Ppp1r9a protein_coding protein_coding MGP_WSBEiJ_T0074963.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1650155 1916942 + MGP_WSBEiJ_P0074963 Ppp1r9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074964.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1650155 1916950 + MGP_WSBEiJ_P0074964 Ppp1r9a protein_coding protein_coding MGP_WSBEiJ_T0074965.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1651146 1911380 + MGP_WSBEiJ_P0074965 Ppp1r9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074966.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1865283 1868411 + Ppp1r9a protein_coding processed_transcript MGP_WSBEiJ_T0074967.1 MGP_WSBEiJ_G0029605.1 mouse_genomes_project 6 1868082 1871194 + Ppp1r9a protein_coding retained_intron MGP_WSBEiJ_T0078746.1 MGP_WSBEiJ_G0030427.1 mouse_genomes_project 6 126802587 126806924 - Emg1 protein_coding retained_intron MGP_WSBEiJ_T0078747.1 MGP_WSBEiJ_G0030427.1 mouse_genomes_project 6 126802883 126810705 - MGP_WSBEiJ_P0078747 Emg1 protein_coding protein_coding MGP_WSBEiJ_T0078748.1 MGP_WSBEiJ_G0030427.1 mouse_genomes_project 6 126802884 126804162 - Emg1 protein_coding processed_transcript MGP_WSBEiJ_T0078749.1 MGP_WSBEiJ_G0030427.1 mouse_genomes_project 6 126802960 126810596 - Emg1 protein_coding retained_intron MGP_WSBEiJ_T0078750.1 MGP_WSBEiJ_G0030427.1 mouse_genomes_project 6 126803453 126810668 - Emg1 protein_coding retained_intron MGP_WSBEiJ_T0078751.1 MGP_WSBEiJ_G0030427.1 mouse_genomes_project 6 126803662 126810584 - MGP_WSBEiJ_P0078751 Emg1 protein_coding protein_coding MGP_WSBEiJ_T0079757.1 MGP_WSBEiJ_G0030660.1 mouse_genomes_project 6 150738511 150742604 - MGP_WSBEiJ_P0079757 1700034J05Rik protein_coding protein_coding MGP_WSBEiJ_T0079758.1 MGP_WSBEiJ_G0030660.1 mouse_genomes_project 6 150739482 150742596 - MGP_WSBEiJ_P0079758 1700034J05Rik protein_coding protein_coding MGP_WSBEiJ_T0074916.1 MGP_WSBEiJ_G0029597.1 mouse_genomes_project 6 673661 679136 - MGP_WSBEiJ_P0074916 Tfpi2 protein_coding protein_coding MGP_WSBEiJ_T0074917.1 MGP_WSBEiJ_G0029597.1 mouse_genomes_project 6 674451 698972 - MGP_WSBEiJ_P0074917 Tfpi2 protein_coding protein_coding MGP_WSBEiJ_T0074918.1 MGP_WSBEiJ_G0029597.1 mouse_genomes_project 6 676613 699033 - MGP_WSBEiJ_P0074918 Tfpi2 protein_coding protein_coding MGP_WSBEiJ_T0074999.1 MGP_WSBEiJ_G0029613.1 mouse_genomes_project 6 3365820 3388756 - MGP_WSBEiJ_P0074999 Shfm1 protein_coding protein_coding MGP_WSBEiJ_T0075000.1 MGP_WSBEiJ_G0029613.1 mouse_genomes_project 6 3386534 3388761 - Shfm1 protein_coding retained_intron MGP_WSBEiJ_T0011438.1 MGP_WSBEiJ_G0009595.1 mouse_genomes_project 6 45831042 45831119 + Gm25283 misc_RNA misc_RNA MGP_WSBEiJ_T0011637.1 MGP_WSBEiJ_G0009770.1 mouse_genomes_project 6 132029186 132039797 - MGP_WSBEiJ_P0011637 Clec7a polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011638.1 MGP_WSBEiJ_G0009770.1 mouse_genomes_project 6 132029186 132039802 - MGP_WSBEiJ_P0011638 Clec7a polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0011639.1 MGP_WSBEiJ_G0009770.1 mouse_genomes_project 6 132030625 132039802 - MGP_WSBEiJ_P0011639 Clec7a polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0011640.1 MGP_WSBEiJ_G0009770.1 mouse_genomes_project 6 132037670 132039804 - Clec7a polymorphic_pseudogene retained_intron MGP_WSBEiJ_T0079172.1 MGP_WSBEiJ_G0009770.1 mouse_genomes_project 6 132029182 132039710 - MGP_WSBEiJ_P0079172 Clec7a polymorphic_pseudogene unknown_likely_coding MGP_WSBEiJ_T0076825.1 MGP_WSBEiJ_G0030047.1 mouse_genomes_project 6 72379533 72395874 + MGP_WSBEiJ_P0076825 Ggcx protein_coding protein_coding MGP_WSBEiJ_T0076826.1 MGP_WSBEiJ_G0030047.1 mouse_genomes_project 6 72379566 72395505 + MGP_WSBEiJ_P0076826 Ggcx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076827.1 MGP_WSBEiJ_G0030047.1 mouse_genomes_project 6 72383082 72395346 + MGP_WSBEiJ_P0076827 Ggcx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076828.1 MGP_WSBEiJ_G0030047.1 mouse_genomes_project 6 72383133 72389220 + MGP_WSBEiJ_P0076828 Ggcx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076829.1 MGP_WSBEiJ_G0030047.1 mouse_genomes_project 6 72391796 72394362 + MGP_WSBEiJ_P0076829 Ggcx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077400.1 MGP_WSBEiJ_G0030160.1 mouse_genomes_project 6 88074790 88081149 - MGP_WSBEiJ_P0077400 Gkn3 protein_coding protein_coding MGP_WSBEiJ_T0015147.1 MGP_WSBEiJ_G0013277.1 mouse_genomes_project 6 134355460 134357308 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015098.1 MGP_WSBEiJ_G0013228.1 mouse_genomes_project 6 122816345 122817776 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015133.1 MGP_WSBEiJ_G0013263.1 mouse_genomes_project 6 130652221 130652618 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076137.1 MGP_WSBEiJ_G0029872.1 mouse_genomes_project 6 46820567 46823529 - Rarres2 protein_coding retained_intron MGP_WSBEiJ_T0076138.1 MGP_WSBEiJ_G0029872.1 mouse_genomes_project 6 46820567 46823571 - MGP_WSBEiJ_P0076138 Rarres2 protein_coding protein_coding MGP_WSBEiJ_T0076139.1 MGP_WSBEiJ_G0029872.1 mouse_genomes_project 6 46820567 46823638 - MGP_WSBEiJ_P0076139 Rarres2 protein_coding protein_coding MGP_WSBEiJ_T0076140.1 MGP_WSBEiJ_G0029872.1 mouse_genomes_project 6 46820567 46823670 - MGP_WSBEiJ_P0076140 Rarres2 protein_coding protein_coding MGP_WSBEiJ_T0076141.1 MGP_WSBEiJ_G0029872.1 mouse_genomes_project 6 46820581 46823672 - MGP_WSBEiJ_P0076141 Rarres2 protein_coding protein_coding MGP_WSBEiJ_T0076462.1 MGP_WSBEiJ_G0029949.1 mouse_genomes_project 6 54325148 54328589 - MGP_WSBEiJ_P0076462 Neurod6 protein_coding protein_coding MGP_WSBEiJ_T0075770.1 MGP_WSBEiJ_G0029759.1 mouse_genomes_project 6 36079737 36128910 + MGP_WSBEiJ_P0075770 Ttc26 protein_coding protein_coding MGP_WSBEiJ_T0075771.1 MGP_WSBEiJ_G0029759.1 mouse_genomes_project 6 36079793 36093394 + MGP_WSBEiJ_P0075771 Ttc26 protein_coding protein_coding MGP_WSBEiJ_T0075772.1 MGP_WSBEiJ_G0029759.1 mouse_genomes_project 6 36079793 36128910 + MGP_WSBEiJ_P0075772 Ttc26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075773.1 MGP_WSBEiJ_G0029759.1 mouse_genomes_project 6 36079797 36096560 + MGP_WSBEiJ_P0075773 Ttc26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075774.1 MGP_WSBEiJ_G0029759.1 mouse_genomes_project 6 36089758 36093732 + Ttc26 protein_coding retained_intron MGP_WSBEiJ_T0008548.1 MGP_WSBEiJ_G0006914.1 mouse_genomes_project 6 101120672 101145131 - Gm44442 lincRNA lincRNA MGP_WSBEiJ_T0008549.1 MGP_WSBEiJ_G0006914.1 mouse_genomes_project 6 101120673 101124864 - Gm44442 lincRNA lincRNA MGP_WSBEiJ_T0008499.1 MGP_WSBEiJ_G0006878.1 mouse_genomes_project 6 73608212 73630573 - Gm31747 lincRNA lincRNA MGP_WSBEiJ_T0002522.1 MGP_WSBEiJ_G0002430.1 mouse_genomes_project 6 39431940 39431991 + MGP_WSBEiJ_P0002522 Trbj2-2 TR_J_gene TR_J_gene MGP_WSBEiJ_T0079787.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152006001 152039874 - MGP_WSBEiJ_P0079787 Ergic2 protein_coding protein_coding MGP_WSBEiJ_T0079788.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152008140 152039607 - MGP_WSBEiJ_P0079788 Ergic2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079789.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152008234 152014993 - MGP_WSBEiJ_P0079789 Ergic2 protein_coding protein_coding MGP_WSBEiJ_T0079790.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152008289 152010127 - MGP_WSBEiJ_P0079790 Ergic2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079791.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152008569 152022091 - MGP_WSBEiJ_P0079791 Ergic2 protein_coding protein_coding MGP_WSBEiJ_T0079792.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152008852 152023076 - Ergic2 protein_coding retained_intron MGP_WSBEiJ_T0079793.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152009964 152016607 - Ergic2 protein_coding retained_intron MGP_WSBEiJ_T0079794.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152010616 152039874 - Ergic2 protein_coding processed_transcript MGP_WSBEiJ_T0079795.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152014937 152023361 - Ergic2 protein_coding retained_intron MGP_WSBEiJ_T0079796.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152016400 152022074 - Ergic2 protein_coding processed_transcript MGP_WSBEiJ_T0079797.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152016446 152039522 - MGP_WSBEiJ_P0079797 Ergic2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079798.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152017819 152023178 - Ergic2 protein_coding processed_transcript MGP_WSBEiJ_T0079799.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152022028 152030287 - Ergic2 protein_coding retained_intron MGP_WSBEiJ_T0079800.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152026454 152039477 - Ergic2 protein_coding retained_intron MGP_WSBEiJ_T0079801.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152028989 152039522 - MGP_WSBEiJ_P0079801 Ergic2 protein_coding protein_coding MGP_WSBEiJ_T0079802.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152029744 152039521 - Ergic2 protein_coding retained_intron MGP_WSBEiJ_T0079803.1 MGP_WSBEiJ_G0030668.1 mouse_genomes_project 6 152030197 152039505 - Ergic2 protein_coding processed_transcript MGP_WSBEiJ_T0014958.1 MGP_WSBEiJ_G0013088.1 mouse_genomes_project 6 67140693 67140854 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0075058.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8723585 8750665 + MGP_WSBEiJ_P0075058 Phf14 protein_coding protein_coding MGP_WSBEiJ_T0075059.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8723660 8771802 + MGP_WSBEiJ_P0075059 Phf14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075060.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8743129 8855732 + MGP_WSBEiJ_P0075060 Phf14 protein_coding unknown_likely_coding MGP_WSBEiJ_T0075061.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8743140 8817910 + MGP_WSBEiJ_P0075061 Phf14 protein_coding protein_coding MGP_WSBEiJ_T0075062.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8743174 8817978 + MGP_WSBEiJ_P0075062 Phf14 protein_coding protein_coding MGP_WSBEiJ_T0075063.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8743175 8892659 + MGP_WSBEiJ_P0075063 Phf14 protein_coding protein_coding MGP_WSBEiJ_T0075064.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8744034 8794191 + MGP_WSBEiJ_P0075064 Phf14 protein_coding protein_coding MGP_WSBEiJ_T0075065.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8794796 8796389 + Phf14 protein_coding retained_intron MGP_WSBEiJ_T0075066.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8800659 8805090 + Phf14 protein_coding retained_intron MGP_WSBEiJ_T0075067.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8816716 8892554 + MGP_WSBEiJ_P0075067 Phf14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075068.1 MGP_WSBEiJ_G0029629.1 mouse_genomes_project 6 8852507 8858423 + Phf14 protein_coding retained_intron MGP_WSBEiJ_T0100952.1 MGP_WSBEiJ_G0039409.1 mouse_genomes_project 6 136528998 136531081 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000296.1 MGP_WSBEiJ_G0000244.1 mouse_genomes_project 6 69775275 69775581 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0075438.1 MGP_WSBEiJ_G0029703.1 mouse_genomes_project 6 27061474 27086543 + MGP_WSBEiJ_P0075438 Tspan33 protein_coding protein_coding MGP_WSBEiJ_T0075439.1 MGP_WSBEiJ_G0029703.1 mouse_genomes_project 6 27061486 27086541 + MGP_WSBEiJ_P0075439 Tspan33 protein_coding protein_coding MGP_WSBEiJ_T0075440.1 MGP_WSBEiJ_G0029703.1 mouse_genomes_project 6 27076036 27082827 + Tspan33 protein_coding retained_intron MGP_WSBEiJ_T0078535.1 MGP_WSBEiJ_G0030376.1 mouse_genomes_project 6 122178303 122201264 - MGP_WSBEiJ_P0078535 Cecr5 protein_coding protein_coding MGP_WSBEiJ_T0078536.1 MGP_WSBEiJ_G0030376.1 mouse_genomes_project 6 122188712 122201249 - Cecr5 protein_coding retained_intron MGP_WSBEiJ_T0078537.1 MGP_WSBEiJ_G0030376.1 mouse_genomes_project 6 122189591 122201235 - Cecr5 protein_coding retained_intron MGP_WSBEiJ_T0078538.1 MGP_WSBEiJ_G0030376.1 mouse_genomes_project 6 122199915 122201247 - Cecr5 protein_coding retained_intron MGP_WSBEiJ_T0075268.1 MGP_WSBEiJ_G0029663.1 mouse_genomes_project 6 20838342 20839779 - MGP_WSBEiJ_P0075268 Rnf133 protein_coding protein_coding MGP_WSBEiJ_T0075269.1 MGP_WSBEiJ_G0029663.1 mouse_genomes_project 6 20838347 20839680 - MGP_WSBEiJ_P0075269 Rnf133 protein_coding protein_coding MGP_WSBEiJ_T0008472.1 MGP_WSBEiJ_G0006853.1 mouse_genomes_project 6 51010321 51014434 + Gm44028 lincRNA lincRNA MGP_WSBEiJ_T0074922.1 MGP_WSBEiJ_G0029600.1 mouse_genomes_project 6 788589 799225 - MGP_WSBEiJ_P0074922 Bet1 protein_coding protein_coding MGP_WSBEiJ_T0074923.1 MGP_WSBEiJ_G0029600.1 mouse_genomes_project 6 789409 799172 - Bet1 protein_coding processed_transcript MGP_WSBEiJ_T0074924.1 MGP_WSBEiJ_G0029600.1 mouse_genomes_project 6 789563 792352 - Bet1 protein_coding retained_intron MGP_WSBEiJ_T0074925.1 MGP_WSBEiJ_G0029600.1 mouse_genomes_project 6 792578 799225 - Bet1 protein_coding retained_intron MGP_WSBEiJ_T0074926.1 MGP_WSBEiJ_G0029600.1 mouse_genomes_project 6 793755 799183 - Bet1 protein_coding processed_transcript MGP_WSBEiJ_T0074927.1 MGP_WSBEiJ_G0029600.1 mouse_genomes_project 6 793778 799183 - Bet1 protein_coding processed_transcript MGP_WSBEiJ_T0014783.1 MGP_WSBEiJ_G0012913.1 mouse_genomes_project 6 3455163 3457125 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077112.1 MGP_WSBEiJ_G0030107.1 mouse_genomes_project 6 84153845 84171397 + MGP_WSBEiJ_P0077112 Atp6v1b1 protein_coding protein_coding MGP_WSBEiJ_T0077113.1 MGP_WSBEiJ_G0030107.1 mouse_genomes_project 6 84153904 84161625 + Atp6v1b1 protein_coding processed_transcript MGP_WSBEiJ_T0077114.1 MGP_WSBEiJ_G0030107.1 mouse_genomes_project 6 84153919 84162153 + MGP_WSBEiJ_P0077114 Atp6v1b1 protein_coding protein_coding MGP_WSBEiJ_T0077115.1 MGP_WSBEiJ_G0030107.1 mouse_genomes_project 6 84153949 84165593 + MGP_WSBEiJ_P0077115 Atp6v1b1 protein_coding protein_coding MGP_WSBEiJ_T0077116.1 MGP_WSBEiJ_G0030107.1 mouse_genomes_project 6 84162680 84164700 + Atp6v1b1 protein_coding retained_intron MGP_WSBEiJ_T0077117.1 MGP_WSBEiJ_G0030107.1 mouse_genomes_project 6 84169680 84170774 + Atp6v1b1 protein_coding retained_intron MGP_WSBEiJ_T0008399.1 MGP_WSBEiJ_G0006805.1 mouse_genomes_project 6 28323363 28368111 + 4930412F09Rik lincRNA lincRNA MGP_WSBEiJ_T0098423.1 MGP_WSBEiJ_G0037086.1 mouse_genomes_project 6 66351310 66351444 + Gm25260 snRNA snRNA MGP_WSBEiJ_T0001935.1 MGP_WSBEiJ_G0001855.1 mouse_genomes_project 6 44144907 44149031 + TEC TEC MGP_WSBEiJ_T0077591.1 MGP_WSBEiJ_G0030201.1 mouse_genomes_project 6 90915980 90916673 + MGP_WSBEiJ_P0077591 Vmn1r47 protein_coding protein_coding MGP_WSBEiJ_T0014774.1 MGP_WSBEiJ_G0012904.1 mouse_genomes_project 6 565150 565549 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002068.1 MGP_WSBEiJ_G0001988.1 mouse_genomes_project 6 104913722 104916201 + TEC TEC MGP_WSBEiJ_T0077757.1 MGP_WSBEiJ_G0030236.1 mouse_genomes_project 6 95600315 95695915 - MGP_WSBEiJ_P0077757 Lrig1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077758.1 MGP_WSBEiJ_G0030236.1 mouse_genomes_project 6 95600320 95695902 - MGP_WSBEiJ_P0077758 Lrig1 protein_coding protein_coding MGP_WSBEiJ_T0077759.1 MGP_WSBEiJ_G0030236.1 mouse_genomes_project 6 95600322 95695894 - MGP_WSBEiJ_P0077759 Lrig1 protein_coding protein_coding MGP_WSBEiJ_T0077760.1 MGP_WSBEiJ_G0030236.1 mouse_genomes_project 6 95600466 95601180 - Lrig1 protein_coding processed_transcript MGP_WSBEiJ_T0077761.1 MGP_WSBEiJ_G0030236.1 mouse_genomes_project 6 95620833 95676412 - Lrig1 protein_coding processed_transcript MGP_WSBEiJ_T0077762.1 MGP_WSBEiJ_G0030236.1 mouse_genomes_project 6 95622249 95651271 - Lrig1 protein_coding processed_transcript MGP_WSBEiJ_T0077763.1 MGP_WSBEiJ_G0030236.1 mouse_genomes_project 6 95623874 95674641 - Lrig1 protein_coding processed_transcript MGP_WSBEiJ_T0079257.1 MGP_WSBEiJ_G0030559.1 mouse_genomes_project 6 136116319 136117284 + MGP_WSBEiJ_P0079257 Tas2r129 protein_coding protein_coding MGP_WSBEiJ_T0100133.1 MGP_WSBEiJ_G0038723.1 mouse_genomes_project 6 91040181 91041203 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0004963.1 MGP_WSBEiJ_G0004236.1 mouse_genomes_project 6 96121990 96126153 - Kbtbd8os antisense antisense MGP_WSBEiJ_T0097221.1 MGP_WSBEiJ_G0035902.1 mouse_genomes_project 6 51530973 51531112 - Gm26215 scaRNA scaRNA MGP_WSBEiJ_T0002110.1 MGP_WSBEiJ_G0002029.1 mouse_genomes_project 6 136015343 136015654 + TEC TEC MGP_WSBEiJ_T0077579.1 MGP_WSBEiJ_G0030194.1 mouse_genomes_project 6 90621451 90622520 - MGP_WSBEiJ_P0077579 Vmn1r43 protein_coding protein_coding MGP_WSBEiJ_T0015070.1 MGP_WSBEiJ_G0013200.1 mouse_genomes_project 6 113991560 113993126 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014853.1 MGP_WSBEiJ_G0012983.1 mouse_genomes_project 6 39181111 39181674 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0078881.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127157603 127167302 + MGP_WSBEiJ_P0078881 Ing4 protein_coding protein_coding MGP_WSBEiJ_T0078882.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127157679 127164479 + Ing4 protein_coding retained_intron MGP_WSBEiJ_T0078883.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127157679 127167564 + MGP_WSBEiJ_P0078883 Ing4 protein_coding protein_coding MGP_WSBEiJ_T0078884.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127157691 127165872 + Ing4 protein_coding retained_intron MGP_WSBEiJ_T0078885.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127157704 127167108 + Ing4 protein_coding retained_intron MGP_WSBEiJ_T0078886.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127157704 127167565 + MGP_WSBEiJ_P0078886 Ing4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078887.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127161613 127166306 + Ing4 protein_coding retained_intron MGP_WSBEiJ_T0078888.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127163815 127167565 + Ing4 protein_coding retained_intron MGP_WSBEiJ_T0078889.1 MGP_WSBEiJ_G0030449.1 mouse_genomes_project 6 127165939 127166918 + Ing4 protein_coding retained_intron MGP_WSBEiJ_T0097446.1 MGP_WSBEiJ_G0036116.1 mouse_genomes_project 6 100549241 100553128 - Gm20705 sense_intronic sense_intronic MGP_WSBEiJ_T0002015.1 MGP_WSBEiJ_G0001935.1 mouse_genomes_project 6 87939615 87942978 - TEC TEC MGP_WSBEiJ_T0008450.1 MGP_WSBEiJ_G0006838.1 mouse_genomes_project 6 47015109 47016141 + 4833403J16Rik lincRNA lincRNA MGP_WSBEiJ_T0075524.1 MGP_WSBEiJ_G0029713.1 mouse_genomes_project 6 27963092 27989310 + MGP_WSBEiJ_P0075524 Cpa2 protein_coding protein_coding MGP_WSBEiJ_T0075525.1 MGP_WSBEiJ_G0029713.1 mouse_genomes_project 6 27963152 27965980 + Cpa2 protein_coding retained_intron MGP_WSBEiJ_T0075526.1 MGP_WSBEiJ_G0029713.1 mouse_genomes_project 6 27963180 27968617 + Cpa2 protein_coding processed_transcript MGP_WSBEiJ_T0075527.1 MGP_WSBEiJ_G0029713.1 mouse_genomes_project 6 27964715 27966499 + Cpa2 protein_coding retained_intron MGP_WSBEiJ_T0075528.1 MGP_WSBEiJ_G0029713.1 mouse_genomes_project 6 27965423 27975632 + Cpa2 protein_coding retained_intron MGP_WSBEiJ_T0075529.1 MGP_WSBEiJ_G0029713.1 mouse_genomes_project 6 27965992 27972876 + Cpa2 protein_coding retained_intron MGP_WSBEiJ_T0075530.1 MGP_WSBEiJ_G0029713.1 mouse_genomes_project 6 27968148 27968662 + Cpa2 protein_coding processed_transcript MGP_WSBEiJ_T0075531.1 MGP_WSBEiJ_G0029713.1 mouse_genomes_project 6 27975478 27989082 + Cpa2 protein_coding retained_intron MGP_WSBEiJ_T0074954.1 MGP_WSBEiJ_G0029604.1 mouse_genomes_project 6 1478351 1494086 + MGP_WSBEiJ_P0074954 protein_coding protein_coding MGP_WSBEiJ_T0074955.1 MGP_WSBEiJ_G0029604.1 mouse_genomes_project 6 1478351 1494089 + MGP_WSBEiJ_P0074955 protein_coding protein_coding MGP_WSBEiJ_T0074956.1 MGP_WSBEiJ_G0029604.1 mouse_genomes_project 6 1478451 1494089 + MGP_WSBEiJ_P0074956 protein_coding protein_coding MGP_WSBEiJ_T0079489.1 MGP_WSBEiJ_G0030610.1 mouse_genomes_project 6 143393415 143530137 + MGP_WSBEiJ_P0079489 Pik3c2g protein_coding protein_coding MGP_WSBEiJ_T0077731.1 MGP_WSBEiJ_G0030231.1 mouse_genomes_project 6 93682396 93860971 - MGP_WSBEiJ_P0077731 Adamts9 protein_coding protein_coding MGP_WSBEiJ_T0077732.1 MGP_WSBEiJ_G0030231.1 mouse_genomes_project 6 93682398 93860701 - MGP_WSBEiJ_P0077732 Adamts9 protein_coding protein_coding MGP_WSBEiJ_T0077733.1 MGP_WSBEiJ_G0030231.1 mouse_genomes_project 6 93704635 93776930 - Adamts9 protein_coding retained_intron MGP_WSBEiJ_T0077736.1 MGP_WSBEiJ_G0030231.1 mouse_genomes_project 6 93759497 93776940 - Adamts9 protein_coding retained_intron MGP_WSBEiJ_T0077737.1 MGP_WSBEiJ_G0030231.1 mouse_genomes_project 6 93768076 93771419 - Adamts9 protein_coding retained_intron MGP_WSBEiJ_T0077739.1 MGP_WSBEiJ_G0030231.1 mouse_genomes_project 6 93843189 93860971 - Adamts9 protein_coding processed_transcript MGP_WSBEiJ_T0079381.1 MGP_WSBEiJ_G0030591.1 mouse_genomes_project 6 140191773 140219930 - MGP_WSBEiJ_P0079381 Wbp11 protein_coding protein_coding MGP_WSBEiJ_T0079382.1 MGP_WSBEiJ_G0030591.1 mouse_genomes_project 6 140196140 140200509 - MGP_WSBEiJ_P0079382 Wbp11 protein_coding protein_coding MGP_WSBEiJ_T0079383.1 MGP_WSBEiJ_G0030591.1 mouse_genomes_project 6 140196365 140219833 - MGP_WSBEiJ_P0079383 Wbp11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079384.1 MGP_WSBEiJ_G0030591.1 mouse_genomes_project 6 140199031 140219840 - Wbp11 protein_coding retained_intron MGP_WSBEiJ_T0079385.1 MGP_WSBEiJ_G0030591.1 mouse_genomes_project 6 140207725 140219832 - Wbp11 protein_coding retained_intron MGP_WSBEiJ_T0079386.1 MGP_WSBEiJ_G0030591.1 mouse_genomes_project 6 140208477 140209465 - Wbp11 protein_coding retained_intron MGP_WSBEiJ_T0079387.1 MGP_WSBEiJ_G0030591.1 mouse_genomes_project 6 140208885 140219433 - MGP_WSBEiJ_P0079387 Wbp11 protein_coding protein_coding MGP_WSBEiJ_T0008552.1 MGP_WSBEiJ_G0006917.1 mouse_genomes_project 6 101772814 101780324 + 1700049E22Rik lincRNA lincRNA MGP_WSBEiJ_T0077013.1 MGP_WSBEiJ_G0030088.1 mouse_genomes_project 6 83482888 83483788 + MGP_WSBEiJ_P0077013 Mrpl53 protein_coding protein_coding MGP_WSBEiJ_T0077014.1 MGP_WSBEiJ_G0030088.1 mouse_genomes_project 6 83482968 83483788 + Mrpl53 protein_coding retained_intron MGP_WSBEiJ_T0015076.1 MGP_WSBEiJ_G0013206.1 mouse_genomes_project 6 115028928 115029153 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0076154.1 MGP_WSBEiJ_G0029877.1 mouse_genomes_project 6 46855119 46875730 + MGP_WSBEiJ_P0076154 Zfp775 protein_coding protein_coding MGP_WSBEiJ_T0076155.1 MGP_WSBEiJ_G0029877.1 mouse_genomes_project 6 46858623 46872360 + MGP_WSBEiJ_P0076155 Zfp775 protein_coding protein_coding MGP_WSBEiJ_T0076156.1 MGP_WSBEiJ_G0029877.1 mouse_genomes_project 6 46865784 46875730 + MGP_WSBEiJ_P0076156 Zfp775 protein_coding protein_coding MGP_WSBEiJ_T0010632.1 MGP_WSBEiJ_G0008789.1 mouse_genomes_project 6 126816440 126816512 - Mir141 miRNA miRNA MGP_WSBEiJ_T0010608.1 MGP_WSBEiJ_G0008765.1 mouse_genomes_project 6 85855015 85855097 - Mir705 miRNA miRNA MGP_WSBEiJ_T0077486.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89238834 89254149 - MGP_WSBEiJ_P0077486 Sec61a1 protein_coding protein_coding MGP_WSBEiJ_T0077487.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89240056 89241629 - Sec61a1 protein_coding processed_transcript MGP_WSBEiJ_T0077488.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89241430 89247662 - Sec61a1 protein_coding processed_transcript MGP_WSBEiJ_T0077489.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89241586 89249140 - Sec61a1 protein_coding retained_intron MGP_WSBEiJ_T0077490.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89243936 89247980 - Sec61a1 protein_coding retained_intron MGP_WSBEiJ_T0077491.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89247295 89248052 - Sec61a1 protein_coding retained_intron MGP_WSBEiJ_T0077492.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89249049 89254017 - Sec61a1 protein_coding retained_intron MGP_WSBEiJ_T0077493.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89249445 89251219 - Sec61a1 protein_coding retained_intron MGP_WSBEiJ_T0077494.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89250564 89254072 - Sec61a1 protein_coding retained_intron MGP_WSBEiJ_T0077495.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89250602 89254035 - Sec61a1 protein_coding processed_transcript MGP_WSBEiJ_T0077496.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89250622 89254147 - Sec61a1 protein_coding retained_intron MGP_WSBEiJ_T0077497.1 MGP_WSBEiJ_G0030180.1 mouse_genomes_project 6 89253421 89254037 - Sec61a1 protein_coding processed_transcript MGP_WSBEiJ_T0002668.1 MGP_WSBEiJ_G0002552.1 mouse_genomes_project 6 38947655 38947940 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0077193.1 MGP_WSBEiJ_G0030118.1 mouse_genomes_project 6 85694470 85717753 + MGP_WSBEiJ_P0077193 Emx1 protein_coding protein_coding MGP_WSBEiJ_T0077194.1 MGP_WSBEiJ_G0030118.1 mouse_genomes_project 6 85705960 85717857 + Emx1 protein_coding retained_intron MGP_WSBEiJ_T0098407.1 MGP_WSBEiJ_G0037070.1 mouse_genomes_project 6 26836467 26836573 - Gm26484 snRNA snRNA MGP_WSBEiJ_T0078968.1 MGP_WSBEiJ_G0030465.1 mouse_genomes_project 6 127515108 127533062 - MGP_WSBEiJ_P0078968 Plekhg6 protein_coding protein_coding MGP_WSBEiJ_T0000272.1 MGP_WSBEiJ_G0000220.1 mouse_genomes_project 6 67145731 67145984 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0002095.1 MGP_WSBEiJ_G0002014.1 mouse_genomes_project 6 126816171 126816471 - TEC TEC MGP_WSBEiJ_T0010626.1 MGP_WSBEiJ_G0008783.1 mouse_genomes_project 6 118152285 118152355 - Mir7043 miRNA miRNA MGP_WSBEiJ_T0001869.1 MGP_WSBEiJ_G0001789.1 mouse_genomes_project 6 1327939 1328877 + TEC TEC MGP_WSBEiJ_T0075966.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40244541 40272382 + MGP_WSBEiJ_P0075966 Clcn1 protein_coding protein_coding MGP_WSBEiJ_T0075967.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40244623 40271904 + MGP_WSBEiJ_P0075967 Clcn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075968.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40244712 40271904 + MGP_WSBEiJ_P0075968 Clcn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075969.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40244712 40271955 + MGP_WSBEiJ_P0075969 Clcn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075970.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40244712 40271904 + MGP_WSBEiJ_P0075970 Clcn1 protein_coding protein_coding MGP_WSBEiJ_T0075971.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40244712 40271904 + MGP_WSBEiJ_P0075971 Clcn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075972.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40244722 40271683 + MGP_WSBEiJ_P0075972 Clcn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075973.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40256770 40273481 + Clcn1 protein_coding processed_transcript MGP_WSBEiJ_T0075974.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40267933 40270849 + MGP_WSBEiJ_P0075974 Clcn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075975.1 MGP_WSBEiJ_G0029822.1 mouse_genomes_project 6 40270276 40271129 + Clcn1 protein_coding retained_intron MGP_WSBEiJ_T0076897.1 MGP_WSBEiJ_G0030061.1 mouse_genomes_project 6 77428106 77444989 + MGP_WSBEiJ_P0076897 Lrrtm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0076898.1 MGP_WSBEiJ_G0030061.1 mouse_genomes_project 6 77428114 77430935 + MGP_WSBEiJ_P0076898 Lrrtm1 protein_coding protein_coding MGP_WSBEiJ_T0076899.1 MGP_WSBEiJ_G0030061.1 mouse_genomes_project 6 77428135 77430929 + MGP_WSBEiJ_P0076899 Lrrtm1 protein_coding protein_coding MGP_WSBEiJ_T0076900.1 MGP_WSBEiJ_G0030061.1 mouse_genomes_project 6 77428339 77429530 + MGP_WSBEiJ_P0076900 Lrrtm1 protein_coding protein_coding MGP_WSBEiJ_T0011436.1 MGP_WSBEiJ_G0009593.1 mouse_genomes_project 6 28168566 28168665 + Gm27568 misc_RNA misc_RNA MGP_WSBEiJ_T0008515.1 MGP_WSBEiJ_G0006889.1 mouse_genomes_project 6 85015024 85015680 + lincRNA lincRNA MGP_WSBEiJ_T0079129.1 MGP_WSBEiJ_G0030503.1 mouse_genomes_project 6 131206542 131277439 - MGP_WSBEiJ_P0079129 Klrb1b protein_coding protein_coding MGP_WSBEiJ_T0079130.1 MGP_WSBEiJ_G0030503.1 mouse_genomes_project 6 131261129 131277421 - MGP_WSBEiJ_P0079130 Klrb1b protein_coding protein_coding MGP_WSBEiJ_T0079131.1 MGP_WSBEiJ_G0030503.1 mouse_genomes_project 6 131261649 131277398 - MGP_WSBEiJ_P0079131 Klrb1b protein_coding protein_coding MGP_WSBEiJ_T0079132.1 MGP_WSBEiJ_G0030503.1 mouse_genomes_project 6 131269260 131277413 - MGP_WSBEiJ_P0079132 Klrb1b protein_coding protein_coding MGP_WSBEiJ_T0008444.1 MGP_WSBEiJ_G0006832.1 mouse_genomes_project 6 42082767 42085640 - Gm35216 lincRNA lincRNA MGP_WSBEiJ_T0008473.1 MGP_WSBEiJ_G0006854.1 mouse_genomes_project 6 51755586 51759428 + Gm4872 lincRNA lincRNA MGP_WSBEiJ_T0079313.1 MGP_WSBEiJ_G0030574.1 mouse_genomes_project 6 138183063 138188781 + MGP_WSBEiJ_P0079313 Cdkn1b protein_coding protein_coding MGP_WSBEiJ_T0079314.1 MGP_WSBEiJ_G0030574.1 mouse_genomes_project 6 138183063 138190218 + MGP_WSBEiJ_P0079314 Cdkn1b protein_coding protein_coding MGP_WSBEiJ_T0079315.1 MGP_WSBEiJ_G0030574.1 mouse_genomes_project 6 138183176 138188727 + MGP_WSBEiJ_P0079315 Cdkn1b protein_coding protein_coding MGP_WSBEiJ_T0075506.1 MGP_WSBEiJ_G0029710.1 mouse_genomes_project 6 27819361 27871121 + MGP_WSBEiJ_P0075506 Klhdc10 protein_coding protein_coding MGP_WSBEiJ_T0075507.1 MGP_WSBEiJ_G0029710.1 mouse_genomes_project 6 27819487 27873019 + MGP_WSBEiJ_P0075507 Klhdc10 protein_coding protein_coding MGP_WSBEiJ_T0075508.1 MGP_WSBEiJ_G0029710.1 mouse_genomes_project 6 27819491 27868395 + MGP_WSBEiJ_P0075508 Klhdc10 protein_coding protein_coding MGP_WSBEiJ_T0075509.1 MGP_WSBEiJ_G0029710.1 mouse_genomes_project 6 27834832 27865280 + MGP_WSBEiJ_P0075509 Klhdc10 protein_coding protein_coding MGP_WSBEiJ_T0075510.1 MGP_WSBEiJ_G0029710.1 mouse_genomes_project 6 27861650 27868674 + Klhdc10 protein_coding retained_intron MGP_WSBEiJ_T0008526.1 MGP_WSBEiJ_G0006899.1 mouse_genomes_project 6 88912963 88915249 - Gm44246 lincRNA lincRNA MGP_WSBEiJ_T0075240.1 MGP_WSBEiJ_G0029658.1 mouse_genomes_project 6 19441557 19492433 - MGP_WSBEiJ_P0075240 Fam3c protein_coding protein_coding MGP_WSBEiJ_T0075241.1 MGP_WSBEiJ_G0029658.1 mouse_genomes_project 6 19442917 19492336 - MGP_WSBEiJ_P0075241 Fam3c protein_coding protein_coding MGP_WSBEiJ_T0075242.1 MGP_WSBEiJ_G0029658.1 mouse_genomes_project 6 19443495 19464589 - Fam3c protein_coding processed_transcript MGP_WSBEiJ_T0075243.1 MGP_WSBEiJ_G0029658.1 mouse_genomes_project 6 19444366 19492311 - MGP_WSBEiJ_P0075243 Fam3c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0075244.1 MGP_WSBEiJ_G0029658.1 mouse_genomes_project 6 19457422 19480161 - MGP_WSBEiJ_P0075244 Fam3c protein_coding protein_coding MGP_WSBEiJ_T0017637.1 MGP_WSBEiJ_G0015045.1 mouse_genomes_project 6 13375473 13390244 - Gm43996 processed_transcript lincRNA MGP_WSBEiJ_T0017638.1 MGP_WSBEiJ_G0015045.1 mouse_genomes_project 6 13388530 13390198 - Gm43996 processed_transcript retained_intron MGP_WSBEiJ_T0015142.1 MGP_WSBEiJ_G0013272.1 mouse_genomes_project 6 133245707 133245813 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017689.1 MGP_WSBEiJ_G0015060.1 mouse_genomes_project 6 66446286 66510014 + A430010J10Rik processed_transcript lincRNA MGP_WSBEiJ_T0017690.1 MGP_WSBEiJ_G0015060.1 mouse_genomes_project 6 66446290 66447652 + A430010J10Rik processed_transcript retained_intron MGP_WSBEiJ_T0017691.1 MGP_WSBEiJ_G0015060.1 mouse_genomes_project 6 66506508 66509698 + A430010J10Rik processed_transcript retained_intron MGP_WSBEiJ_T0017692.1 MGP_WSBEiJ_G0015060.1 mouse_genomes_project 6 66506787 66507204 + A430010J10Rik processed_transcript pseudogene MGP_WSBEiJ_T0079537.1 MGP_WSBEiJ_G0030620.1 mouse_genomes_project 6 145473159 145534331 - MGP_WSBEiJ_P0079537 Slco1a4 protein_coding protein_coding MGP_WSBEiJ_T0079538.1 MGP_WSBEiJ_G0030620.1 mouse_genomes_project 6 145474446 145520287 - MGP_WSBEiJ_P0079538 Slco1a4 protein_coding protein_coding MGP_WSBEiJ_T0079539.1 MGP_WSBEiJ_G0030620.1 mouse_genomes_project 6 145506368 145534359 - MGP_WSBEiJ_P0079539 Slco1a4 protein_coding protein_coding MGP_WSBEiJ_T0079540.1 MGP_WSBEiJ_G0030620.1 mouse_genomes_project 6 145528986 145531835 - Slco1a4 protein_coding retained_intron MGP_WSBEiJ_T0079248.1 MGP_WSBEiJ_G0030550.1 mouse_genomes_project 6 135903741 135904785 + MGP_WSBEiJ_P0079248 Tas2r102 protein_coding protein_coding MGP_WSBEiJ_T0014968.1 MGP_WSBEiJ_G0013098.1 mouse_genomes_project 6 68546839 68547291 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017683.1 MGP_WSBEiJ_G0015058.1 mouse_genomes_project 6 66219071 66219876 - 4930597O21Rik processed_transcript retained_intron MGP_WSBEiJ_T0017684.1 MGP_WSBEiJ_G0015058.1 mouse_genomes_project 6 66219073 66220880 - 4930597O21Rik processed_transcript bidirectional_promoter_lncRNA MGP_WSBEiJ_T0079173.1 MGP_WSBEiJ_G0030517.1 mouse_genomes_project 6 132053454 132076113 - MGP_WSBEiJ_P0079173 Olr1 protein_coding protein_coding MGP_WSBEiJ_T0079174.1 MGP_WSBEiJ_G0030517.1 mouse_genomes_project 6 132055842 132076055 - MGP_WSBEiJ_P0079174 Olr1 protein_coding protein_coding MGP_WSBEiJ_T0079175.1 MGP_WSBEiJ_G0030517.1 mouse_genomes_project 6 132055842 132076055 - MGP_WSBEiJ_P0079175 Olr1 protein_coding protein_coding MGP_WSBEiJ_T0079176.1 MGP_WSBEiJ_G0030517.1 mouse_genomes_project 6 132055881 132065812 - MGP_WSBEiJ_P0079176 Olr1 protein_coding protein_coding MGP_WSBEiJ_T0079177.1 MGP_WSBEiJ_G0030517.1 mouse_genomes_project 6 132068871 132076113 - MGP_WSBEiJ_P0079177 Olr1 protein_coding protein_coding MGP_WSBEiJ_T0002672.1 MGP_WSBEiJ_G0002556.1 mouse_genomes_project 6 38991518 38991989 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0099678.1 MGP_WSBEiJ_G0038341.1 mouse_genomes_project 6 118266474 118266598 - Gm22882 snoRNA snoRNA MGP_WSBEiJ_T0010577.1 MGP_WSBEiJ_G0008734.1 mouse_genomes_project 6 19928942 19929045 - Gm23961 miRNA miRNA MGP_WSBEiJ_T0001871.1 MGP_WSBEiJ_G0001791.1 mouse_genomes_project 6 1693308 1697449 + TEC TEC MGP_WSBEiJ_T0004824.1 MGP_WSBEiJ_G0004144.1 mouse_genomes_project 6 14001768 14123680 - Gm4876 antisense antisense MGP_WSBEiJ_T0004825.1 MGP_WSBEiJ_G0004144.1 mouse_genomes_project 6 14013050 14124024 - Gm4876 antisense antisense MGP_WSBEiJ_T0004826.1 MGP_WSBEiJ_G0004144.1 mouse_genomes_project 6 14033798 14123656 - Gm4876 antisense antisense MGP_WSBEiJ_T0004827.1 MGP_WSBEiJ_G0004144.1 mouse_genomes_project 6 14048281 14123808 - Gm4876 antisense antisense MGP_WSBEiJ_T0004828.1 MGP_WSBEiJ_G0004144.1 mouse_genomes_project 6 14111853 14123937 - Gm4876 antisense antisense MGP_WSBEiJ_T0004829.1 MGP_WSBEiJ_G0004144.1 mouse_genomes_project 6 14123579 14124001 - Gm4876 antisense antisense MGP_WSBEiJ_T0014932.1 MGP_WSBEiJ_G0013062.1 mouse_genomes_project 6 64519350 64519696 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014962.1 MGP_WSBEiJ_G0013092.1 mouse_genomes_project 6 67702103 67702828 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002618.1 MGP_WSBEiJ_G0002508.1 mouse_genomes_project 6 38982282 38982775 + MGP_WSBEiJ_P0002618 TR_V_gene TR_V_gene MGP_WSBEiJ_T0075441.1 MGP_WSBEiJ_G0029704.1 mouse_genomes_project 6 27105029 27107537 + Smo protein_coding retained_intron MGP_WSBEiJ_T0075442.1 MGP_WSBEiJ_G0029704.1 mouse_genomes_project 6 27105226 27134202 + MGP_WSBEiJ_P0075442 Smo protein_coding protein_coding MGP_WSBEiJ_T0075443.1 MGP_WSBEiJ_G0029704.1 mouse_genomes_project 6 27105543 27132686 + MGP_WSBEiJ_P0075443 Smo protein_coding unknown_likely_coding MGP_WSBEiJ_T0077398.1 MGP_WSBEiJ_G0030158.1 mouse_genomes_project 6 88035979 88041274 - MGP_WSBEiJ_P0077398 Gkn1 protein_coding protein_coding MGP_WSBEiJ_T0008372.1 MGP_WSBEiJ_G0006787.1 mouse_genomes_project 6 4553018 4562674 + Gm44217 lincRNA lincRNA MGP_WSBEiJ_T0014903.1 MGP_WSBEiJ_G0013033.1 mouse_genomes_project 6 56852005 56852443 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008619.1 MGP_WSBEiJ_G0006970.1 mouse_genomes_project 6 144607857 144691029 + Gm30524 lincRNA lincRNA MGP_WSBEiJ_T0008620.1 MGP_WSBEiJ_G0006970.1 mouse_genomes_project 6 144607883 144689333 + Gm30524 lincRNA lincRNA MGP_WSBEiJ_T0075852.1 MGP_WSBEiJ_G0029776.1 mouse_genomes_project 6 37401586 37532532 - MGP_WSBEiJ_P0075852 Braf protein_coding protein_coding MGP_WSBEiJ_T0075853.1 MGP_WSBEiJ_G0029776.1 mouse_genomes_project 6 37412459 37532262 - MGP_WSBEiJ_P0075853 Braf protein_coding protein_coding MGP_WSBEiJ_T0075854.1 MGP_WSBEiJ_G0029776.1 mouse_genomes_project 6 37437943 37443436 - Braf protein_coding retained_intron MGP_WSBEiJ_T0075855.1 MGP_WSBEiJ_G0029776.1 mouse_genomes_project 6 37438958 37441904 - Braf protein_coding retained_intron MGP_WSBEiJ_T0075856.1 MGP_WSBEiJ_G0029776.1 mouse_genomes_project 6 37450230 37466906 - Braf protein_coding retained_intron MGP_WSBEiJ_T0014798.1 MGP_WSBEiJ_G0012928.1 mouse_genomes_project 6 8945288 8945586 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0077689.1 MGP_WSBEiJ_G0030222.1 mouse_genomes_project 6 92632285 92678128 - MGP_WSBEiJ_P0077689 Grip2 protein_coding protein_coding MGP_WSBEiJ_T0077690.1 MGP_WSBEiJ_G0030222.1 mouse_genomes_project 6 92632285 92697822 - MGP_WSBEiJ_P0077690 Grip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077691.1 MGP_WSBEiJ_G0030222.1 mouse_genomes_project 6 92634224 92677990 - MGP_WSBEiJ_P0077691 Grip2 protein_coding protein_coding MGP_WSBEiJ_T0077692.1 MGP_WSBEiJ_G0030222.1 mouse_genomes_project 6 92654321 92678065 - MGP_WSBEiJ_P0077692 Grip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077693.1 MGP_WSBEiJ_G0030222.1 mouse_genomes_project 6 92655376 92666926 - MGP_WSBEiJ_P0077693 Grip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0077694.1 MGP_WSBEiJ_G0030222.1 mouse_genomes_project 6 92663353 92666942 - Grip2 protein_coding retained_intron MGP_WSBEiJ_T0011636.1 MGP_WSBEiJ_G0009769.1 mouse_genomes_project 6 40770570 40771506 + MGP_WSBEiJ_P0011636 Olfr451-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0100304.1 MGP_WSBEiJ_G0038804.1 mouse_genomes_project 6 123528159 123774581 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0011435.1 MGP_WSBEiJ_G0009592.1 mouse_genomes_project 6 28166215 28166445 + Gm27522 misc_RNA misc_RNA MGP_WSBEiJ_T0074968.1 MGP_WSBEiJ_G0029606.1 mouse_genomes_project 6 1925165 1954569 - MGP_WSBEiJ_P0074968 Pon1 protein_coding protein_coding MGP_WSBEiJ_T0074969.1 MGP_WSBEiJ_G0029606.1 mouse_genomes_project 6 1925570 1954407 - MGP_WSBEiJ_P0074969 Pon1 protein_coding protein_coding MGP_WSBEiJ_T0074970.1 MGP_WSBEiJ_G0029606.1 mouse_genomes_project 6 1928870 1954407 - MGP_WSBEiJ_P0074970 Pon1 protein_coding protein_coding MGP_WSBEiJ_T0074971.1 MGP_WSBEiJ_G0029606.1 mouse_genomes_project 6 1945001 1954386 - Pon1 protein_coding retained_intron MGP_WSBEiJ_T0004903.1 MGP_WSBEiJ_G0004203.1 mouse_genomes_project 6 80191578 80278946 - Gm4409 antisense antisense MGP_WSBEiJ_T0079332.1 MGP_WSBEiJ_G0030579.1 mouse_genomes_project 6 138426110 138460663 - MGP_WSBEiJ_P0079332 Hebp1 protein_coding protein_coding MGP_WSBEiJ_T0079333.1 MGP_WSBEiJ_G0030579.1 mouse_genomes_project 6 138442897 138460640 - Hebp1 protein_coding processed_transcript MGP_WSBEiJ_T0079334.1 MGP_WSBEiJ_G0030579.1 mouse_genomes_project 6 138445310 138494705 - Hebp1 protein_coding processed_transcript MGP_WSBEiJ_T0079335.1 MGP_WSBEiJ_G0030579.1 mouse_genomes_project 6 138458012 138460583 - Hebp1 protein_coding retained_intron MGP_WSBEiJ_T0015043.1 MGP_WSBEiJ_G0013173.1 mouse_genomes_project 6 101438783 101502596 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008547.1 MGP_WSBEiJ_G0006913.1 mouse_genomes_project 6 101075412 101087861 - Gm43067 lincRNA lincRNA MGP_WSBEiJ_T0015161.1 MGP_WSBEiJ_G0013291.1 mouse_genomes_project 6 135972183 135972538 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011473.1 MGP_WSBEiJ_G0009630.1 mouse_genomes_project 6 145594655 145594874 - Gm22036 misc_RNA misc_RNA MGP_WSBEiJ_T0098400.1 MGP_WSBEiJ_G0037063.1 mouse_genomes_project 6 3737141 3737303 - Gm22155 snRNA snRNA MGP_WSBEiJ_T0078010.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731545 114757250 + Cpne9 protein_coding retained_intron MGP_WSBEiJ_T0078011.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731545 114757192 + MGP_WSBEiJ_P0078011 Cpne9 protein_coding protein_coding MGP_WSBEiJ_T0078012.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731548 114756452 + MGP_WSBEiJ_P0078012 Cpne9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0078013.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731573 114734063 + Cpne9 protein_coding retained_intron MGP_WSBEiJ_T0078014.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731574 114736929 + Cpne9 protein_coding retained_intron MGP_WSBEiJ_T0078015.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731577 114735166 + Cpne9 protein_coding retained_intron MGP_WSBEiJ_T0078016.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731602 114735630 + Cpne9 protein_coding processed_transcript MGP_WSBEiJ_T0078017.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731603 114736085 + Cpne9 protein_coding processed_transcript MGP_WSBEiJ_T0078018.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114731712 114757167 + MGP_WSBEiJ_P0078018 Cpne9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0078019.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114740133 114757194 + Cpne9 protein_coding retained_intron MGP_WSBEiJ_T0078020.1 MGP_WSBEiJ_G0030286.1 mouse_genomes_project 6 114745967 114753326 + Cpne9 protein_coding processed_transcript MGP_WSBEiJ_T0014841.1 MGP_WSBEiJ_G0012971.1 mouse_genomes_project 6 34233514 34233943 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0014940.1 MGP_WSBEiJ_G0013070.1 mouse_genomes_project 6 65293053 65293748 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008488.1 MGP_WSBEiJ_G0006867.1 mouse_genomes_project 6 70557051 70578371 + Gm43291 lincRNA lincRNA MGP_WSBEiJ_T0008519.1 MGP_WSBEiJ_G0006892.1 mouse_genomes_project 6 87136636 87137330 - Gm43936 lincRNA lincRNA MGP_WSBEiJ_T0001878.1 MGP_WSBEiJ_G0001798.1 mouse_genomes_project 6 4174047 4176725 + TEC TEC MGP_WSBEiJ_T0000299.1 MGP_WSBEiJ_G0000247.1 mouse_genomes_project 6 70105537 70384977 + IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0074941.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1400833 1478222 - MGP_WSBEiJ_P0074941 Sgce protein_coding protein_coding MGP_WSBEiJ_T0074942.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1400833 1478250 - MGP_WSBEiJ_P0074942 Sgce protein_coding protein_coding MGP_WSBEiJ_T0074943.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1400837 1478203 - MGP_WSBEiJ_P0074943 Sgce protein_coding protein_coding MGP_WSBEiJ_T0074944.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1400837 1478253 - MGP_WSBEiJ_P0074944 Sgce protein_coding protein_coding MGP_WSBEiJ_T0074945.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1400867 1478162 - MGP_WSBEiJ_P0074945 Sgce protein_coding protein_coding MGP_WSBEiJ_T0074946.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1400901 1478170 - MGP_WSBEiJ_P0074946 Sgce protein_coding protein_coding MGP_WSBEiJ_T0074947.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1400901 1478234 - MGP_WSBEiJ_P0074947 Sgce protein_coding protein_coding MGP_WSBEiJ_T0074948.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1404193 1478203 - Sgce protein_coding retained_intron MGP_WSBEiJ_T0074949.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1415724 1478126 - Sgce protein_coding retained_intron MGP_WSBEiJ_T0074950.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1418541 1478116 - Sgce protein_coding processed_transcript MGP_WSBEiJ_T0074951.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1418713 1478109 - MGP_WSBEiJ_P0074951 Sgce protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0074952.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1434695 1439111 - Sgce protein_coding retained_intron MGP_WSBEiJ_T0074953.1 MGP_WSBEiJ_G0029603.1 mouse_genomes_project 6 1467814 1471213 - Sgce protein_coding retained_intron MGP_WSBEiJ_T0075277.1 MGP_WSBEiJ_G0029667.1 mouse_genomes_project 6 21654223 21724152 - MGP_WSBEiJ_P0075277 Iqub protein_coding protein_coding MGP_WSBEiJ_T0076055.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45641726 45687416 + MGP_WSBEiJ_P0076055 Cul1 protein_coding protein_coding MGP_WSBEiJ_T0076056.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45641820 45674661 + MGP_WSBEiJ_P0076056 Cul1 protein_coding protein_coding MGP_WSBEiJ_T0076057.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45642233 45714451 + MGP_WSBEiJ_P0076057 Cul1 protein_coding protein_coding MGP_WSBEiJ_T0076058.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45642649 45716824 + MGP_WSBEiJ_P0076058 Cul1 protein_coding protein_coding MGP_WSBEiJ_T0076059.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45642717 45674873 + MGP_WSBEiJ_P0076059 Cul1 protein_coding protein_coding MGP_WSBEiJ_T0076060.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45705515 45716743 + Cul1 protein_coding processed_transcript MGP_WSBEiJ_T0076061.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45707699 45710479 + Cul1 protein_coding retained_intron MGP_WSBEiJ_T0076062.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45710395 45713966 + Cul1 protein_coding retained_intron MGP_WSBEiJ_T0076063.1 MGP_WSBEiJ_G0029856.1 mouse_genomes_project 6 45714248 45716464 + Cul1 protein_coding processed_transcript MGP_WSBEiJ_T0014804.1 MGP_WSBEiJ_G0012934.1 mouse_genomes_project 6 10867858 10868212 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011467.1 MGP_WSBEiJ_G0009624.1 mouse_genomes_project 6 117186860 117187110 - Gm27853 misc_RNA misc_RNA MGP_WSBEiJ_T0079345.1 MGP_WSBEiJ_G0030582.1 mouse_genomes_project 6 138607145 138608424 - MGP_WSBEiJ_P0079345 Pbp2 protein_coding protein_coding MGP_WSBEiJ_T0011472.1 MGP_WSBEiJ_G0009629.1 mouse_genomes_project 6 145387977 145388288 - Gm23069 misc_RNA misc_RNA MGP_WSBEiJ_T0076945.1 MGP_WSBEiJ_G0030074.1 mouse_genomes_project 6 82963247 83060038 - Pole4 protein_coding processed_transcript MGP_WSBEiJ_T0076946.1 MGP_WSBEiJ_G0030074.1 mouse_genomes_project 6 82966122 82993412 - MGP_WSBEiJ_P0076946 Pole4 protein_coding protein_coding MGP_WSBEiJ_T0076947.1 MGP_WSBEiJ_G0030074.1 mouse_genomes_project 6 82987254 82993471 - MGP_WSBEiJ_P0076947 Pole4 protein_coding protein_coding MGP_WSBEiJ_T0076948.1 MGP_WSBEiJ_G0030074.1 mouse_genomes_project 6 82987869 82993077 - Pole4 protein_coding processed_transcript MGP_WSBEiJ_T0076949.1 MGP_WSBEiJ_G0030074.1 mouse_genomes_project 6 82988396 82993075 - Pole4 protein_coding processed_transcript MGP_WSBEiJ_T0079580.1 MGP_WSBEiJ_G0030630.1 mouse_genomes_project 6 146086733 146137476 - MGP_WSBEiJ_P0079580 Gys2 protein_coding protein_coding MGP_WSBEiJ_T0079581.1 MGP_WSBEiJ_G0030630.1 mouse_genomes_project 6 146086737 146087739 - MGP_WSBEiJ_P0079581 Gys2 protein_coding protein_coding MGP_WSBEiJ_T0077234.1 MGP_WSBEiJ_G0030126.1 mouse_genomes_project 6 86047295 86049764 - MGP_WSBEiJ_P0077234 Egr4 protein_coding protein_coding MGP_WSBEiJ_T0083781.1 MGP_WSBEiJ_G0031686.1 mouse_genomes_project 7 101225380 101240312 + MGP_WSBEiJ_P0083781 Prkrir protein_coding protein_coding MGP_WSBEiJ_T0083782.1 MGP_WSBEiJ_G0031686.1 mouse_genomes_project 7 101225380 101237617 + MGP_WSBEiJ_P0083782 Prkrir protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083783.1 MGP_WSBEiJ_G0031686.1 mouse_genomes_project 7 101225605 101237363 + MGP_WSBEiJ_P0083783 Prkrir protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083784.1 MGP_WSBEiJ_G0031686.1 mouse_genomes_project 7 101232127 101237507 + Prkrir protein_coding processed_transcript MGP_WSBEiJ_T0084912.1 MGP_WSBEiJ_G0032086.1 mouse_genomes_project 7 125817924 125852365 - MGP_WSBEiJ_P0084912 Gga2 protein_coding protein_coding MGP_WSBEiJ_T0084913.1 MGP_WSBEiJ_G0032086.1 mouse_genomes_project 7 125817924 125852310 - MGP_WSBEiJ_P0084913 Gga2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084914.1 MGP_WSBEiJ_G0032086.1 mouse_genomes_project 7 125819964 125833622 - Gga2 protein_coding retained_intron MGP_WSBEiJ_T0084915.1 MGP_WSBEiJ_G0032086.1 mouse_genomes_project 7 125827812 125830263 - Gga2 protein_coding retained_intron MGP_WSBEiJ_T0084916.1 MGP_WSBEiJ_G0032086.1 mouse_genomes_project 7 125835892 125852323 - Gga2 protein_coding retained_intron MGP_WSBEiJ_T0084917.1 MGP_WSBEiJ_G0032086.1 mouse_genomes_project 7 125841571 125852330 - Gga2 protein_coding retained_intron MGP_WSBEiJ_T0099717.1 MGP_WSBEiJ_G0038380.1 mouse_genomes_project 7 60222237 60222306 - Gm25499 snoRNA snoRNA MGP_WSBEiJ_T0101060.1 MGP_WSBEiJ_G0039517.1 mouse_genomes_project 7 48839207 48840055 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005206.1 MGP_WSBEiJ_G0004414.1 mouse_genomes_project 7 125811282 125820316 + Gm44987 antisense antisense MGP_WSBEiJ_T0081135.1 MGP_WSBEiJ_G0031051.1 mouse_genomes_project 7 25697821 25712089 + MGP_WSBEiJ_P0081135 BC024978 protein_coding protein_coding MGP_WSBEiJ_T0081136.1 MGP_WSBEiJ_G0031051.1 mouse_genomes_project 7 25697821 25706234 + MGP_WSBEiJ_P0081136 BC024978 protein_coding protein_coding MGP_WSBEiJ_T0081137.1 MGP_WSBEiJ_G0031051.1 mouse_genomes_project 7 25699163 25706075 + MGP_WSBEiJ_P0081137 BC024978 protein_coding protein_coding MGP_WSBEiJ_T0081138.1 MGP_WSBEiJ_G0031051.1 mouse_genomes_project 7 25704545 25706234 + MGP_WSBEiJ_P0081138 BC024978 protein_coding protein_coding MGP_WSBEiJ_T0081009.1 MGP_WSBEiJ_G0031015.1 mouse_genomes_project 7 23762453 23805897 - MGP_WSBEiJ_P0081009 protein_coding protein_coding MGP_WSBEiJ_T0015379.1 MGP_WSBEiJ_G0013509.1 mouse_genomes_project 7 105351962 105352204 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080136.1 MGP_WSBEiJ_G0030726.1 mouse_genomes_project 7 1731136 1751174 - MGP_WSBEiJ_P0080136 Ube2s protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080137.1 MGP_WSBEiJ_G0030726.1 mouse_genomes_project 7 1744606 1749942 - Ube2s protein_coding retained_intron MGP_WSBEiJ_T0080138.1 MGP_WSBEiJ_G0030726.1 mouse_genomes_project 7 1745647 1751413 - MGP_WSBEiJ_P0080138 Ube2s protein_coding protein_coding MGP_WSBEiJ_T0080139.1 MGP_WSBEiJ_G0030726.1 mouse_genomes_project 7 1746005 1750947 - MGP_WSBEiJ_P0080139 Ube2s protein_coding protein_coding MGP_WSBEiJ_T0080140.1 MGP_WSBEiJ_G0030726.1 mouse_genomes_project 7 1749265 1750729 - MGP_WSBEiJ_P0080140 Ube2s protein_coding protein_coding MGP_WSBEiJ_T0086216.1 MGP_WSBEiJ_G0032366.1 mouse_genomes_project 7 146279568 146282576 - MGP_WSBEiJ_P0086216 Cend1 protein_coding protein_coding MGP_WSBEiJ_T0086217.1 MGP_WSBEiJ_G0032366.1 mouse_genomes_project 7 146279568 146282642 - MGP_WSBEiJ_P0086217 Cend1 protein_coding protein_coding MGP_WSBEiJ_T0086218.1 MGP_WSBEiJ_G0032366.1 mouse_genomes_project 7 146279573 146282569 - MGP_WSBEiJ_P0086218 Cend1 protein_coding protein_coding MGP_WSBEiJ_T0086219.1 MGP_WSBEiJ_G0032366.1 mouse_genomes_project 7 146279573 146282502 - MGP_WSBEiJ_P0086219 Cend1 protein_coding protein_coding MGP_WSBEiJ_T0005126.1 MGP_WSBEiJ_G0004361.1 mouse_genomes_project 7 37729022 37729238 - D530033B14Rik antisense antisense MGP_WSBEiJ_T0005127.1 MGP_WSBEiJ_G0004361.1 mouse_genomes_project 7 37729218 37742714 - D530033B14Rik antisense antisense MGP_WSBEiJ_T0101074.1 MGP_WSBEiJ_G0039531.1 mouse_genomes_project 7 87036852 87047157 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082801.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56726236 56778784 + Cyfip1 protein_coding retained_intron MGP_WSBEiJ_T0082802.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56726561 56819488 + MGP_WSBEiJ_P0082802 Cyfip1 protein_coding protein_coding MGP_WSBEiJ_T0082803.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56726562 56763513 + MGP_WSBEiJ_P0082803 Cyfip1 protein_coding protein_coding MGP_WSBEiJ_T0082804.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56726696 56817385 + MGP_WSBEiJ_P0082804 Cyfip1 protein_coding protein_coding MGP_WSBEiJ_T0082805.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56726740 56812683 + Cyfip1 protein_coding retained_intron MGP_WSBEiJ_T0082806.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56726745 56817358 + MGP_WSBEiJ_P0082806 Cyfip1 protein_coding protein_coding MGP_WSBEiJ_T0082807.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56757445 56810857 + MGP_WSBEiJ_P0082807 Cyfip1 protein_coding protein_coding MGP_WSBEiJ_T0082808.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56783259 56817385 + Cyfip1 protein_coding retained_intron MGP_WSBEiJ_T0082809.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56784004 56791281 + Cyfip1 protein_coding retained_intron MGP_WSBEiJ_T0082810.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56795381 56800738 + Cyfip1 protein_coding retained_intron MGP_WSBEiJ_T0082811.1 MGP_WSBEiJ_G0031464.1 mouse_genomes_project 7 56815770 56817358 + Cyfip1 protein_coding retained_intron MGP_WSBEiJ_T0081690.1 MGP_WSBEiJ_G0031184.1 mouse_genomes_project 7 29493230 29504463 - MGP_WSBEiJ_P0081690 Haus5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081691.1 MGP_WSBEiJ_G0031184.1 mouse_genomes_project 7 29493235 29504524 - MGP_WSBEiJ_P0081691 Haus5 protein_coding protein_coding MGP_WSBEiJ_T0081692.1 MGP_WSBEiJ_G0031184.1 mouse_genomes_project 7 29493457 29496523 - Haus5 protein_coding retained_intron MGP_WSBEiJ_T0081693.1 MGP_WSBEiJ_G0031184.1 mouse_genomes_project 7 29497079 29498482 - Haus5 protein_coding retained_intron MGP_WSBEiJ_T0081694.1 MGP_WSBEiJ_G0031184.1 mouse_genomes_project 7 29497607 29504490 - Haus5 protein_coding retained_intron MGP_WSBEiJ_T0081695.1 MGP_WSBEiJ_G0031184.1 mouse_genomes_project 7 29498366 29500375 - Haus5 protein_coding retained_intron MGP_WSBEiJ_T0015200.1 MGP_WSBEiJ_G0013330.1 mouse_genomes_project 7 176424 177304 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083870.1 MGP_WSBEiJ_G0031713.1 mouse_genomes_project 7 103118855 103133076 + Ucp3 protein_coding retained_intron MGP_WSBEiJ_T0083871.1 MGP_WSBEiJ_G0031713.1 mouse_genomes_project 7 103118856 103134081 + MGP_WSBEiJ_P0083871 Ucp3 protein_coding protein_coding MGP_WSBEiJ_T0083872.1 MGP_WSBEiJ_G0031713.1 mouse_genomes_project 7 103118858 103132956 + MGP_WSBEiJ_P0083872 Ucp3 protein_coding protein_coding MGP_WSBEiJ_T0083873.1 MGP_WSBEiJ_G0031713.1 mouse_genomes_project 7 103118859 103133059 + Ucp3 protein_coding retained_intron MGP_WSBEiJ_T0084428.1 MGP_WSBEiJ_G0031961.1 mouse_genomes_project 7 111759118 111760075 - MGP_WSBEiJ_P0084428 Olfr504 protein_coding protein_coding MGP_WSBEiJ_T0015321.1 MGP_WSBEiJ_G0013451.1 mouse_genomes_project 7 59724883 59727636 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083558.1 MGP_WSBEiJ_G0031634.1 mouse_genomes_project 7 89607822 89680964 - MGP_WSBEiJ_P0083558 Tyr protein_coding protein_coding MGP_WSBEiJ_T0101031.1 MGP_WSBEiJ_G0039488.1 mouse_genomes_project 7 40676258 40682596 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002186.1 MGP_WSBEiJ_G0002105.1 mouse_genomes_project 7 55770595 55772131 + TEC TEC MGP_WSBEiJ_T0010669.1 MGP_WSBEiJ_G0008826.1 mouse_genomes_project 7 24179681 24179777 - Gm24865 miRNA miRNA MGP_WSBEiJ_T0081105.1 MGP_WSBEiJ_G0031043.1 mouse_genomes_project 7 25488547 25496290 + MGP_WSBEiJ_P0081105 protein_coding protein_coding MGP_WSBEiJ_T0082596.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46275407 46297205 + MGP_WSBEiJ_P0082596 Tmem143 protein_coding protein_coding MGP_WSBEiJ_T0082597.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46275547 46297205 + MGP_WSBEiJ_P0082597 Tmem143 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082598.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46275567 46297201 + MGP_WSBEiJ_P0082598 Tmem143 protein_coding protein_coding MGP_WSBEiJ_T0082599.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46275886 46280595 + Tmem143 protein_coding retained_intron MGP_WSBEiJ_T0082600.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46275889 46286380 + Tmem143 protein_coding processed_transcript MGP_WSBEiJ_T0082601.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46275895 46285627 + Tmem143 protein_coding retained_intron MGP_WSBEiJ_T0082602.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46275895 46287687 + MGP_WSBEiJ_P0082602 Tmem143 protein_coding protein_coding MGP_WSBEiJ_T0082603.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46287024 46287629 + Tmem143 protein_coding processed_transcript MGP_WSBEiJ_T0082604.1 MGP_WSBEiJ_G0031406.1 mouse_genomes_project 7 46295807 46296767 + Tmem143 protein_coding processed_transcript MGP_WSBEiJ_T0082086.1 MGP_WSBEiJ_G0031265.1 mouse_genomes_project 7 43365203 43368307 + MGP_WSBEiJ_P0082086 protein_coding protein_coding MGP_WSBEiJ_T0082979.1 MGP_WSBEiJ_G0031500.1 mouse_genomes_project 7 67034569 67102468 + MGP_WSBEiJ_P0082979 Chsy1 protein_coding protein_coding MGP_WSBEiJ_T0084063.1 MGP_WSBEiJ_G0031748.1 mouse_genomes_project 7 104880861 104977036 - MGP_WSBEiJ_P0084063 Nup98 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084064.1 MGP_WSBEiJ_G0031748.1 mouse_genomes_project 7 104895896 104977058 - MGP_WSBEiJ_P0084064 Nup98 protein_coding protein_coding MGP_WSBEiJ_T0002181.1 MGP_WSBEiJ_G0002100.1 mouse_genomes_project 7 44540721 44540878 + TEC TEC MGP_WSBEiJ_T0010705.1 MGP_WSBEiJ_G0008862.1 mouse_genomes_project 7 62545423 62545493 - Gm23873 miRNA miRNA MGP_WSBEiJ_T0081879.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33474775 33504036 - MGP_WSBEiJ_P0081879 Gpi1 protein_coding protein_coding MGP_WSBEiJ_T0081880.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33475615 33484053 - Gpi1 protein_coding retained_intron MGP_WSBEiJ_T0081881.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33475662 33481579 - MGP_WSBEiJ_P0081881 Gpi1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081882.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33475839 33487120 - MGP_WSBEiJ_P0081882 Gpi1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081883.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33475863 33502677 - MGP_WSBEiJ_P0081883 Gpi1 protein_coding protein_coding MGP_WSBEiJ_T0081884.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33476349 33503957 - MGP_WSBEiJ_P0081884 Gpi1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081885.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33476475 33479947 - Gpi1 protein_coding retained_intron MGP_WSBEiJ_T0081886.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33477722 33503942 - MGP_WSBEiJ_P0081886 Gpi1 protein_coding protein_coding MGP_WSBEiJ_T0081887.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33488892 33503963 - Gpi1 protein_coding retained_intron MGP_WSBEiJ_T0081888.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33500786 33503497 - Gpi1 protein_coding processed_transcript MGP_WSBEiJ_T0081889.1 MGP_WSBEiJ_G0031223.1 mouse_genomes_project 7 33502855 33503989 - Gpi1 protein_coding retained_intron MGP_WSBEiJ_T0081907.1 MGP_WSBEiJ_G0031227.1 mouse_genomes_project 7 33942017 33958715 - MGP_WSBEiJ_P0081907 Kctd15 protein_coding protein_coding MGP_WSBEiJ_T0081908.1 MGP_WSBEiJ_G0031227.1 mouse_genomes_project 7 33942018 33957155 - MGP_WSBEiJ_P0081908 Kctd15 protein_coding protein_coding MGP_WSBEiJ_T0081909.1 MGP_WSBEiJ_G0031227.1 mouse_genomes_project 7 33942022 33959797 - MGP_WSBEiJ_P0081909 Kctd15 protein_coding protein_coding MGP_WSBEiJ_T0081910.1 MGP_WSBEiJ_G0031227.1 mouse_genomes_project 7 33943185 33952320 - Kctd15 protein_coding processed_transcript MGP_WSBEiJ_T0081911.1 MGP_WSBEiJ_G0031227.1 mouse_genomes_project 7 33953562 33958706 - MGP_WSBEiJ_P0081911 Kctd15 protein_coding protein_coding MGP_WSBEiJ_T0081912.1 MGP_WSBEiJ_G0031227.1 mouse_genomes_project 7 33956949 33957344 - Kctd15 protein_coding processed_transcript MGP_WSBEiJ_T0081913.1 MGP_WSBEiJ_G0031227.1 mouse_genomes_project 7 33956949 33957630 - Kctd15 protein_coding processed_transcript MGP_WSBEiJ_T0081914.1 MGP_WSBEiJ_G0031227.1 mouse_genomes_project 7 33959657 33961018 - Kctd15 protein_coding processed_transcript MGP_WSBEiJ_T0081255.1 MGP_WSBEiJ_G0031081.1 mouse_genomes_project 7 26771010 26781833 + MGP_WSBEiJ_P0081255 Fbl protein_coding protein_coding MGP_WSBEiJ_T0099737.1 MGP_WSBEiJ_G0038400.1 mouse_genomes_project 7 102236480 102236611 - Gm25409 snoRNA snoRNA MGP_WSBEiJ_T0084803.1 MGP_WSBEiJ_G0032054.1 mouse_genomes_project 7 123406180 123430484 + MGP_WSBEiJ_P0084803 Acsm4 protein_coding protein_coding MGP_WSBEiJ_T0081184.1 MGP_WSBEiJ_G0031060.1 mouse_genomes_project 7 25971538 25989536 + MGP_WSBEiJ_P0081184 Blvrb protein_coding protein_coding MGP_WSBEiJ_T0081185.1 MGP_WSBEiJ_G0031060.1 mouse_genomes_project 7 25971560 25983722 + MGP_WSBEiJ_P0081185 Blvrb protein_coding protein_coding MGP_WSBEiJ_T0081186.1 MGP_WSBEiJ_G0031060.1 mouse_genomes_project 7 25971624 25989502 + MGP_WSBEiJ_P0081186 Blvrb protein_coding protein_coding MGP_WSBEiJ_T0081187.1 MGP_WSBEiJ_G0031060.1 mouse_genomes_project 7 25975968 25986644 + Blvrb protein_coding processed_transcript MGP_WSBEiJ_T0008748.1 MGP_WSBEiJ_G0007072.1 mouse_genomes_project 7 69283596 69378521 + lincRNA lincRNA MGP_WSBEiJ_T0008749.1 MGP_WSBEiJ_G0007072.1 mouse_genomes_project 7 69287387 69369078 + lincRNA lincRNA MGP_WSBEiJ_T0008750.1 MGP_WSBEiJ_G0007072.1 mouse_genomes_project 7 69312215 69378519 + lincRNA lincRNA MGP_WSBEiJ_T0008751.1 MGP_WSBEiJ_G0007072.1 mouse_genomes_project 7 69345670 69369157 + lincRNA lincRNA MGP_WSBEiJ_T0081684.1 MGP_WSBEiJ_G0031180.1 mouse_genomes_project 7 29441307 29450901 - MGP_WSBEiJ_P0081684 Upk1a protein_coding protein_coding MGP_WSBEiJ_T0081260.1 MGP_WSBEiJ_G0031083.1 mouse_genomes_project 7 26868780 26870171 + MGP_WSBEiJ_P0081260 Eid2 protein_coding protein_coding MGP_WSBEiJ_T0010681.1 MGP_WSBEiJ_G0008838.1 mouse_genomes_project 7 29942148 29942208 - Mir7050 miRNA miRNA MGP_WSBEiJ_T0080798.1 MGP_WSBEiJ_G0030964.1 mouse_genomes_project 7 22212772 22230744 + MGP_WSBEiJ_P0080798 Zfp112 protein_coding protein_coding MGP_WSBEiJ_T0080799.1 MGP_WSBEiJ_G0030964.1 mouse_genomes_project 7 22212780 22230285 + MGP_WSBEiJ_P0080799 Zfp112 protein_coding protein_coding MGP_WSBEiJ_T0080800.1 MGP_WSBEiJ_G0030964.1 mouse_genomes_project 7 22212816 22214924 + Zfp112 protein_coding retained_intron MGP_WSBEiJ_T0080801.1 MGP_WSBEiJ_G0030964.1 mouse_genomes_project 7 22212835 22238361 + MGP_WSBEiJ_P0080801 Zfp112 protein_coding unknown_likely_coding MGP_WSBEiJ_T0100966.1 MGP_WSBEiJ_G0039423.1 mouse_genomes_project 7 8904323 8905246 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081339.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27457007 27479800 + Sirt2 protein_coding processed_transcript MGP_WSBEiJ_T0081340.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27457024 27479805 + MGP_WSBEiJ_P0081340 Sirt2 protein_coding protein_coding MGP_WSBEiJ_T0081341.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27457039 27479800 + MGP_WSBEiJ_P0081341 Sirt2 protein_coding protein_coding MGP_WSBEiJ_T0081342.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27457526 27479800 + Sirt2 protein_coding processed_transcript MGP_WSBEiJ_T0081343.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27468012 27468851 + Sirt2 protein_coding retained_intron MGP_WSBEiJ_T0081344.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27468162 27474527 + Sirt2 protein_coding retained_intron MGP_WSBEiJ_T0081345.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27475813 27478955 + Sirt2 protein_coding processed_transcript MGP_WSBEiJ_T0081346.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27476562 27478814 + Sirt2 protein_coding retained_intron MGP_WSBEiJ_T0081347.1 MGP_WSBEiJ_G0031108.1 mouse_genomes_project 7 27476736 27479448 + Sirt2 protein_coding retained_intron MGP_WSBEiJ_T0079910.1 MGP_WSBEiJ_G0030688.1 mouse_genomes_project 7 489406 493906 + MGP_WSBEiJ_P0079910 Ndufa3 protein_coding protein_coding MGP_WSBEiJ_T0079911.1 MGP_WSBEiJ_G0030688.1 mouse_genomes_project 7 489413 493731 + Ndufa3 protein_coding retained_intron MGP_WSBEiJ_T0079912.1 MGP_WSBEiJ_G0030688.1 mouse_genomes_project 7 489418 489739 + Ndufa3 protein_coding retained_intron MGP_WSBEiJ_T0079913.1 MGP_WSBEiJ_G0030688.1 mouse_genomes_project 7 489419 493707 + MGP_WSBEiJ_P0079913 Ndufa3 protein_coding protein_coding MGP_WSBEiJ_T0079914.1 MGP_WSBEiJ_G0030688.1 mouse_genomes_project 7 489424 493742 + MGP_WSBEiJ_P0079914 Ndufa3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079915.1 MGP_WSBEiJ_G0030688.1 mouse_genomes_project 7 489650 493664 + MGP_WSBEiJ_P0079915 Ndufa3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085015.1 MGP_WSBEiJ_G0032104.1 mouse_genomes_project 7 127898613 128346716 + MGP_WSBEiJ_P0085015 Hs3st4 protein_coding protein_coding MGP_WSBEiJ_T0005131.1 MGP_WSBEiJ_G0004363.1 mouse_genomes_project 7 44145368 44448320 - antisense antisense MGP_WSBEiJ_T0081508.1 MGP_WSBEiJ_G0031144.1 mouse_genomes_project 7 28854209 28857485 - Zfp82 protein_coding retained_intron MGP_WSBEiJ_T0081509.1 MGP_WSBEiJ_G0031144.1 mouse_genomes_project 7 28855749 28873628 - MGP_WSBEiJ_P0081509 Zfp82 protein_coding protein_coding MGP_WSBEiJ_T0081511.1 MGP_WSBEiJ_G0031144.1 mouse_genomes_project 7 28855756 28861029 - Zfp82 protein_coding retained_intron MGP_WSBEiJ_T0081512.1 MGP_WSBEiJ_G0031144.1 mouse_genomes_project 7 28855758 28872867 - MGP_WSBEiJ_P0081512 Zfp82 protein_coding protein_coding MGP_WSBEiJ_T0081513.1 MGP_WSBEiJ_G0031144.1 mouse_genomes_project 7 28856991 28873535 - MGP_WSBEiJ_P0081513 Zfp82 protein_coding protein_coding MGP_WSBEiJ_T0081514.1 MGP_WSBEiJ_G0031144.1 mouse_genomes_project 7 28858962 28873553 - MGP_WSBEiJ_P0081514 Zfp82 protein_coding protein_coding MGP_WSBEiJ_T0085932.1 MGP_WSBEiJ_G0032282.1 mouse_genomes_project 7 143510257 143530380 - MGP_WSBEiJ_P0085932 Bnip3 protein_coding protein_coding MGP_WSBEiJ_T0085933.1 MGP_WSBEiJ_G0032282.1 mouse_genomes_project 7 143514507 143530482 - Bnip3 protein_coding processed_transcript MGP_WSBEiJ_T0085934.1 MGP_WSBEiJ_G0032282.1 mouse_genomes_project 7 143514836 143518507 - Bnip3 protein_coding processed_transcript MGP_WSBEiJ_T0085935.1 MGP_WSBEiJ_G0032282.1 mouse_genomes_project 7 143518770 143530506 - Bnip3 protein_coding processed_transcript MGP_WSBEiJ_T0085936.1 MGP_WSBEiJ_G0032282.1 mouse_genomes_project 7 143518940 143530466 - Bnip3 protein_coding processed_transcript MGP_WSBEiJ_T0081311.1 MGP_WSBEiJ_G0031100.1 mouse_genomes_project 7 27198950 27202676 - MGP_WSBEiJ_P0081311 Nccrp1 protein_coding protein_coding MGP_WSBEiJ_T0082073.1 MGP_WSBEiJ_G0031262.1 mouse_genomes_project 7 41423605 41439239 + MGP_WSBEiJ_P0082073 Zfp788 protein_coding protein_coding MGP_WSBEiJ_T0082074.1 MGP_WSBEiJ_G0031262.1 mouse_genomes_project 7 41423933 41442569 + MGP_WSBEiJ_P0082074 Zfp788 protein_coding protein_coding MGP_WSBEiJ_T0082075.1 MGP_WSBEiJ_G0031262.1 mouse_genomes_project 7 41423958 41440049 + MGP_WSBEiJ_P0082075 Zfp788 protein_coding protein_coding MGP_WSBEiJ_T0082076.1 MGP_WSBEiJ_G0031262.1 mouse_genomes_project 7 41423960 41440688 + MGP_WSBEiJ_P0082076 Zfp788 protein_coding protein_coding MGP_WSBEiJ_T0082077.1 MGP_WSBEiJ_G0031262.1 mouse_genomes_project 7 41423966 41442622 + MGP_WSBEiJ_P0082077 Zfp788 protein_coding protein_coding MGP_WSBEiJ_T0082078.1 MGP_WSBEiJ_G0031262.1 mouse_genomes_project 7 41423979 41443389 + MGP_WSBEiJ_P0082078 Zfp788 protein_coding protein_coding MGP_WSBEiJ_T0082079.1 MGP_WSBEiJ_G0031262.1 mouse_genomes_project 7 41439274 41442287 + MGP_WSBEiJ_P0082079 Zfp788 protein_coding protein_coding MGP_WSBEiJ_T0098509.1 MGP_WSBEiJ_G0037172.1 mouse_genomes_project 7 123698846 123698947 + Gm25217 snRNA snRNA MGP_WSBEiJ_T0010689.1 MGP_WSBEiJ_G0008846.1 mouse_genomes_project 7 45437505 45437579 - Mir5121 miRNA miRNA MGP_WSBEiJ_T0084395.1 MGP_WSBEiJ_G0031935.1 mouse_genomes_project 7 110262729 110296042 + MGP_WSBEiJ_P0084395 Nlrp14 protein_coding protein_coding MGP_WSBEiJ_T0084396.1 MGP_WSBEiJ_G0031935.1 mouse_genomes_project 7 110284593 110296051 + MGP_WSBEiJ_P0084396 Nlrp14 protein_coding protein_coding MGP_WSBEiJ_T0101095.1 MGP_WSBEiJ_G0039552.1 mouse_genomes_project 7 88963366 88964242 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008845.1 MGP_WSBEiJ_G0007135.1 mouse_genomes_project 7 118435364 118441674 - Gm45020 lincRNA lincRNA MGP_WSBEiJ_T0083210.1 MGP_WSBEiJ_G0031540.1 mouse_genomes_project 7 81088043 81113952 - MGP_WSBEiJ_P0083210 Rhcg protein_coding protein_coding MGP_WSBEiJ_T0083211.1 MGP_WSBEiJ_G0031540.1 mouse_genomes_project 7 81088049 81089610 - MGP_WSBEiJ_P0083211 Rhcg protein_coding protein_coding MGP_WSBEiJ_T0083212.1 MGP_WSBEiJ_G0031540.1 mouse_genomes_project 7 81099584 81103691 - MGP_WSBEiJ_P0083212 Rhcg protein_coding protein_coding MGP_WSBEiJ_T0084360.1 MGP_WSBEiJ_G0031907.1 mouse_genomes_project 7 108649579 108684920 - MGP_WSBEiJ_P0084360 Dchs1 protein_coding protein_coding MGP_WSBEiJ_T0084361.1 MGP_WSBEiJ_G0031907.1 mouse_genomes_project 7 108653571 108654488 - Dchs1 protein_coding retained_intron MGP_WSBEiJ_T0084362.1 MGP_WSBEiJ_G0031907.1 mouse_genomes_project 7 108661066 108684946 - MGP_WSBEiJ_P0084362 Dchs1 protein_coding protein_coding MGP_WSBEiJ_T0080003.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1063343 1068481 + MGP_WSBEiJ_P0080003 Leng8 protein_coding protein_coding MGP_WSBEiJ_T0080004.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1063353 1066299 + MGP_WSBEiJ_P0080004 Leng8 protein_coding protein_coding MGP_WSBEiJ_T0080005.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1063353 1074474 + MGP_WSBEiJ_P0080005 Leng8 protein_coding protein_coding MGP_WSBEiJ_T0080006.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1063364 1066752 + MGP_WSBEiJ_P0080006 Leng8 protein_coding protein_coding MGP_WSBEiJ_T0080007.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1063370 1074469 + MGP_WSBEiJ_P0080007 Leng8 protein_coding protein_coding MGP_WSBEiJ_T0080008.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1063375 1068406 + MGP_WSBEiJ_P0080008 Leng8 protein_coding protein_coding MGP_WSBEiJ_T0080009.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1063388 1074470 + Leng8 protein_coding retained_intron MGP_WSBEiJ_T0080010.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1063861 1067389 + MGP_WSBEiJ_P0080010 Leng8 protein_coding protein_coding MGP_WSBEiJ_T0080011.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1068456 1069226 + Leng8 protein_coding retained_intron MGP_WSBEiJ_T0080012.1 MGP_WSBEiJ_G0030700.1 mouse_genomes_project 7 1071016 1071938 + Leng8 protein_coding retained_intron MGP_WSBEiJ_T0081813.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29972648 29981147 - MGP_WSBEiJ_P0081813 Fxyd3 protein_coding protein_coding MGP_WSBEiJ_T0081814.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29975007 29976747 - Fxyd3 protein_coding retained_intron MGP_WSBEiJ_T0081815.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29975009 29981098 - Fxyd3 protein_coding retained_intron MGP_WSBEiJ_T0081816.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29975009 29975510 - Fxyd3 protein_coding retained_intron MGP_WSBEiJ_T0081817.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29975009 29975932 - Fxyd3 protein_coding retained_intron MGP_WSBEiJ_T0081818.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29975010 29981112 - MGP_WSBEiJ_P0081818 Fxyd3 protein_coding protein_coding MGP_WSBEiJ_T0081819.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29975011 29976509 - Fxyd3 protein_coding retained_intron MGP_WSBEiJ_T0081820.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29975356 29979404 - MGP_WSBEiJ_P0081820 Fxyd3 protein_coding protein_coding MGP_WSBEiJ_T0081821.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29976006 29981097 - Fxyd3 protein_coding retained_intron MGP_WSBEiJ_T0081822.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29976473 29981088 - Fxyd3 protein_coding retained_intron MGP_WSBEiJ_T0081823.1 MGP_WSBEiJ_G0031207.1 mouse_genomes_project 7 29977475 29981106 - Fxyd3 protein_coding retained_intron MGP_WSBEiJ_T0005067.1 MGP_WSBEiJ_G0004318.1 mouse_genomes_project 7 1546685 1550405 + Gm44877 antisense antisense MGP_WSBEiJ_T0099722.1 MGP_WSBEiJ_G0038385.1 mouse_genomes_project 7 60552445 60552534 - Gm22373 snoRNA snoRNA MGP_WSBEiJ_T0084185.1 MGP_WSBEiJ_G0031839.1 mouse_genomes_project 7 106940267 106941212 - MGP_WSBEiJ_P0084185 protein_coding protein_coding MGP_WSBEiJ_T0081023.1 MGP_WSBEiJ_G0031020.1 mouse_genomes_project 7 23966308 23968106 - MGP_WSBEiJ_P0081023 Bckdha protein_coding protein_coding MGP_WSBEiJ_T0081024.1 MGP_WSBEiJ_G0031020.1 mouse_genomes_project 7 23966308 23997561 - MGP_WSBEiJ_P0081024 Bckdha protein_coding protein_coding MGP_WSBEiJ_T0008813.1 MGP_WSBEiJ_G0007112.1 mouse_genomes_project 7 85948911 85992313 + Gm26708 lincRNA lincRNA MGP_WSBEiJ_T0010679.1 MGP_WSBEiJ_G0008836.1 mouse_genomes_project 7 29385150 29385227 + Gm38670 miRNA miRNA MGP_WSBEiJ_T0084626.1 MGP_WSBEiJ_G0032018.1 mouse_genomes_project 7 117502085 117576058 - MGP_WSBEiJ_P0084626 Rras2 protein_coding protein_coding MGP_WSBEiJ_T0081531.1 MGP_WSBEiJ_G0031152.1 mouse_genomes_project 7 28996866 29009838 - MGP_WSBEiJ_P0081531 Capns1 protein_coding protein_coding MGP_WSBEiJ_T0081532.1 MGP_WSBEiJ_G0031152.1 mouse_genomes_project 7 28996941 29004176 - MGP_WSBEiJ_P0081532 Capns1 protein_coding protein_coding MGP_WSBEiJ_T0081533.1 MGP_WSBEiJ_G0031152.1 mouse_genomes_project 7 28997119 28999743 - Capns1 protein_coding processed_transcript MGP_WSBEiJ_T0081534.1 MGP_WSBEiJ_G0031152.1 mouse_genomes_project 7 28997434 29004851 - Capns1 protein_coding processed_transcript MGP_WSBEiJ_T0081535.1 MGP_WSBEiJ_G0031152.1 mouse_genomes_project 7 28997458 29003481 - Capns1 protein_coding processed_transcript MGP_WSBEiJ_T0082276.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44789936 44794007 - MGP_WSBEiJ_P0082276 Nr1h2 protein_coding protein_coding MGP_WSBEiJ_T0082277.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44789936 44794270 - MGP_WSBEiJ_P0082277 Nr1h2 protein_coding protein_coding MGP_WSBEiJ_T0082278.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44789937 44794269 - MGP_WSBEiJ_P0082278 Nr1h2 protein_coding protein_coding MGP_WSBEiJ_T0082279.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44789955 44794244 - MGP_WSBEiJ_P0082279 Nr1h2 protein_coding protein_coding MGP_WSBEiJ_T0082280.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44789972 44794244 - MGP_WSBEiJ_P0082280 Nr1h2 protein_coding protein_coding MGP_WSBEiJ_T0082281.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44790622 44794232 - Nr1h2 protein_coding retained_intron MGP_WSBEiJ_T0082282.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44790694 44791944 - Nr1h2 protein_coding retained_intron MGP_WSBEiJ_T0082283.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44791377 44794272 - Nr1h2 protein_coding retained_intron MGP_WSBEiJ_T0082284.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44791460 44792192 - Nr1h2 protein_coding retained_intron MGP_WSBEiJ_T0082285.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44792529 44792908 - Nr1h2 protein_coding retained_intron MGP_WSBEiJ_T0082286.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44792814 44794244 - Nr1h2 protein_coding retained_intron MGP_WSBEiJ_T0082287.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44792913 44793533 - Nr1h2 protein_coding retained_intron MGP_WSBEiJ_T0082288.1 MGP_WSBEiJ_G0031321.1 mouse_genomes_project 7 44792954 44794220 - Nr1h2 protein_coding retained_intron MGP_WSBEiJ_T0080624.1 MGP_WSBEiJ_G0030907.1 mouse_genomes_project 7 17053908 17064683 - MGP_WSBEiJ_P0080624 Qpctl protein_coding protein_coding MGP_WSBEiJ_T0080625.1 MGP_WSBEiJ_G0030907.1 mouse_genomes_project 7 17057772 17062920 - Qpctl protein_coding retained_intron MGP_WSBEiJ_T0084497.1 MGP_WSBEiJ_G0031990.1 mouse_genomes_project 7 113259558 113274869 - MGP_WSBEiJ_P0084497 Tmem41b protein_coding protein_coding MGP_WSBEiJ_T0084498.1 MGP_WSBEiJ_G0031990.1 mouse_genomes_project 7 113264126 113274580 - MGP_WSBEiJ_P0084498 Tmem41b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084499.1 MGP_WSBEiJ_G0031990.1 mouse_genomes_project 7 113264126 113274693 - MGP_WSBEiJ_P0084499 Tmem41b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084500.1 MGP_WSBEiJ_G0031990.1 mouse_genomes_project 7 113264193 113274667 - MGP_WSBEiJ_P0084500 Tmem41b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084501.1 MGP_WSBEiJ_G0031990.1 mouse_genomes_project 7 113267526 113274677 - Tmem41b protein_coding retained_intron MGP_WSBEiJ_T0086307.1 MGP_WSBEiJ_G0032378.1 mouse_genomes_project 7 146644459 146676391 + MGP_WSBEiJ_P0086307 Muc5ac protein_coding protein_coding MGP_WSBEiJ_T0086308.1 MGP_WSBEiJ_G0032378.1 mouse_genomes_project 7 146644459 146676172 + MGP_WSBEiJ_P0086308 Muc5ac protein_coding protein_coding MGP_WSBEiJ_T0080971.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23536617 23566702 + MGP_WSBEiJ_P0080971 Cic protein_coding protein_coding MGP_WSBEiJ_T0080972.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23537300 23540437 + MGP_WSBEiJ_P0080972 Cic protein_coding protein_coding MGP_WSBEiJ_T0080973.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23547596 23557507 + Cic protein_coding processed_transcript MGP_WSBEiJ_T0080974.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23548812 23557470 + Cic protein_coding processed_transcript MGP_WSBEiJ_T0080975.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23551350 23566688 + MGP_WSBEiJ_P0080975 Cic protein_coding protein_coding MGP_WSBEiJ_T0080976.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23551350 23566691 + MGP_WSBEiJ_P0080976 Cic protein_coding protein_coding MGP_WSBEiJ_T0080977.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23555347 23563880 + MGP_WSBEiJ_P0080977 Cic protein_coding protein_coding MGP_WSBEiJ_T0080978.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23555754 23557733 + Cic protein_coding processed_transcript MGP_WSBEiJ_T0080979.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23557207 23558222 + Cic protein_coding retained_intron MGP_WSBEiJ_T0080980.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23558360 23566685 + Cic protein_coding retained_intron MGP_WSBEiJ_T0080981.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23561800 23562244 + Cic protein_coding retained_intron MGP_WSBEiJ_T0080982.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23563708 23566688 + MGP_WSBEiJ_P0080982 Cic protein_coding protein_coding MGP_WSBEiJ_T0080983.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23563745 23564616 + Cic protein_coding retained_intron MGP_WSBEiJ_T0080984.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23564472 23564999 + Cic protein_coding retained_intron MGP_WSBEiJ_T0080985.1 MGP_WSBEiJ_G0031007.1 mouse_genomes_project 7 23565557 23566688 + MGP_WSBEiJ_P0080985 Cic protein_coding protein_coding MGP_WSBEiJ_T0002213.1 MGP_WSBEiJ_G0002131.1 mouse_genomes_project 7 74999415 74999572 + TEC TEC MGP_WSBEiJ_T0015385.1 MGP_WSBEiJ_G0013515.1 mouse_genomes_project 7 107656466 107657459 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015411.1 MGP_WSBEiJ_G0013541.1 mouse_genomes_project 7 131523668 131523840 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080345.1 MGP_WSBEiJ_G0030819.1 mouse_genomes_project 7 10382474 10383401 - MGP_WSBEiJ_P0080345 Vmn1r85 protein_coding protein_coding MGP_WSBEiJ_T0008909.1 MGP_WSBEiJ_G0007176.1 mouse_genomes_project 7 147527925 147533444 - lincRNA lincRNA MGP_WSBEiJ_T0008910.1 MGP_WSBEiJ_G0007176.1 mouse_genomes_project 7 147527954 147530517 - lincRNA lincRNA MGP_WSBEiJ_T0008911.1 MGP_WSBEiJ_G0007176.1 mouse_genomes_project 7 147528030 147528935 - lincRNA lincRNA MGP_WSBEiJ_T0008912.1 MGP_WSBEiJ_G0007176.1 mouse_genomes_project 7 147528692 147529307 - lincRNA lincRNA MGP_WSBEiJ_T0008913.1 MGP_WSBEiJ_G0007176.1 mouse_genomes_project 7 147528903 147530492 - lincRNA lincRNA MGP_WSBEiJ_T0002248.1 MGP_WSBEiJ_G0002166.1 mouse_genomes_project 7 125066640 125067272 - TEC TEC MGP_WSBEiJ_T0084416.1 MGP_WSBEiJ_G0031949.1 mouse_genomes_project 7 111229170 111230199 - MGP_WSBEiJ_P0084416 Olfr480 protein_coding protein_coding MGP_WSBEiJ_T0084170.1 MGP_WSBEiJ_G0031824.1 mouse_genomes_project 7 106703752 106705298 - MGP_WSBEiJ_P0084170 Hbb-bh1 protein_coding protein_coding MGP_WSBEiJ_T0082369.1 MGP_WSBEiJ_G0031343.1 mouse_genomes_project 7 45281882 45288173 - MGP_WSBEiJ_P0082369 Bcl2l12 protein_coding protein_coding MGP_WSBEiJ_T0085882.1 MGP_WSBEiJ_G0032264.1 mouse_genomes_project 7 138190285 138306877 + MGP_WSBEiJ_P0085882 Fank1 protein_coding protein_coding MGP_WSBEiJ_T0085883.1 MGP_WSBEiJ_G0032264.1 mouse_genomes_project 7 138190315 138302204 + MGP_WSBEiJ_P0085883 Fank1 protein_coding protein_coding MGP_WSBEiJ_T0085884.1 MGP_WSBEiJ_G0032264.1 mouse_genomes_project 7 138190366 138306210 + MGP_WSBEiJ_P0085884 Fank1 protein_coding protein_coding MGP_WSBEiJ_T0008684.1 MGP_WSBEiJ_G0007023.1 mouse_genomes_project 7 33504119 33507811 - Gm12762 lincRNA lincRNA MGP_WSBEiJ_T0082767.1 MGP_WSBEiJ_G0031456.1 mouse_genomes_project 7 52513948 52514789 + protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0085438.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131629325 131645571 + Srcap protein_coding retained_intron MGP_WSBEiJ_T0085439.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131629325 131647841 + MGP_WSBEiJ_P0085439 Srcap protein_coding protein_coding MGP_WSBEiJ_T0085440.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131629344 131641367 + MGP_WSBEiJ_P0085440 Srcap protein_coding protein_coding MGP_WSBEiJ_T0085441.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131629369 131643850 + MGP_WSBEiJ_P0085441 Srcap protein_coding protein_coding MGP_WSBEiJ_T0085442.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131629454 131632753 + Srcap protein_coding processed_transcript MGP_WSBEiJ_T0085443.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131629643 131633328 + Srcap protein_coding processed_transcript MGP_WSBEiJ_T0085444.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131629807 131657755 + MGP_WSBEiJ_P0085444 Srcap protein_coding protein_coding MGP_WSBEiJ_T0085445.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131630334 131654895 + Srcap protein_coding retained_intron MGP_WSBEiJ_T0085446.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131630334 131654895 + MGP_WSBEiJ_P0085446 Srcap protein_coding protein_coding MGP_WSBEiJ_T0085447.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131630360 131680467 + MGP_WSBEiJ_P0085447 Srcap protein_coding protein_coding MGP_WSBEiJ_T0085448.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131633324 131638518 + Srcap protein_coding retained_intron MGP_WSBEiJ_T0085449.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131633479 131680024 + MGP_WSBEiJ_P0085449 Srcap protein_coding protein_coding MGP_WSBEiJ_T0085450.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131633479 131680024 + MGP_WSBEiJ_P0085450 Srcap protein_coding protein_coding MGP_WSBEiJ_T0085452.1 MGP_WSBEiJ_G0032180.1 mouse_genomes_project 7 131652280 131654312 + Srcap protein_coding retained_intron MGP_WSBEiJ_T0005236.1 MGP_WSBEiJ_G0004437.1 mouse_genomes_project 7 148134375 148139953 - Gm28821 antisense antisense MGP_WSBEiJ_T0096844.1 MGP_WSBEiJ_G0035525.1 mouse_genomes_project 7 107539966 107540925 + pseudogene pseudogene MGP_WSBEiJ_T0100319.1 MGP_WSBEiJ_G0038814.1 mouse_genomes_project 7 15413963 15423364 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100320.1 MGP_WSBEiJ_G0038814.1 mouse_genomes_project 7 15413963 15423733 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0015207.1 MGP_WSBEiJ_G0013337.1 mouse_genomes_project 7 1207961 1208326 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002200.1 MGP_WSBEiJ_G0002119.1 mouse_genomes_project 7 65174842 65175443 + TEC TEC MGP_WSBEiJ_T0002229.1 MGP_WSBEiJ_G0002147.1 mouse_genomes_project 7 80780746 80784654 + TEC TEC MGP_WSBEiJ_T0082539.1 MGP_WSBEiJ_G0031390.1 mouse_genomes_project 7 46040944 46057663 - MGP_WSBEiJ_P0082539 Sec1 protein_coding protein_coding MGP_WSBEiJ_T0084736.1 MGP_WSBEiJ_G0032036.1 mouse_genomes_project 7 122036555 122100816 - MGP_WSBEiJ_P0084736 Syt17 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084737.1 MGP_WSBEiJ_G0032036.1 mouse_genomes_project 7 122036558 122100755 - MGP_WSBEiJ_P0084737 Syt17 protein_coding protein_coding MGP_WSBEiJ_T0084738.1 MGP_WSBEiJ_G0032036.1 mouse_genomes_project 7 122036559 122099766 - Syt17 protein_coding retained_intron MGP_WSBEiJ_T0084739.1 MGP_WSBEiJ_G0032036.1 mouse_genomes_project 7 122065777 122105365 - MGP_WSBEiJ_P0084739 Syt17 protein_coding protein_coding MGP_WSBEiJ_T0098513.1 MGP_WSBEiJ_G0037176.1 mouse_genomes_project 7 127855037 127855143 - Gm23788 snRNA snRNA MGP_WSBEiJ_T0002153.1 MGP_WSBEiJ_G0002072.1 mouse_genomes_project 7 14736576 14743397 + TEC TEC MGP_WSBEiJ_T0080487.1 MGP_WSBEiJ_G0030866.1 mouse_genomes_project 7 14472620 14480106 - MGP_WSBEiJ_P0080487 Fkrp protein_coding protein_coding MGP_WSBEiJ_T0080488.1 MGP_WSBEiJ_G0030866.1 mouse_genomes_project 7 14474986 14478895 - MGP_WSBEiJ_P0080488 Fkrp protein_coding protein_coding MGP_WSBEiJ_T0080489.1 MGP_WSBEiJ_G0030866.1 mouse_genomes_project 7 14476494 14479067 - Fkrp protein_coding retained_intron MGP_WSBEiJ_T0080490.1 MGP_WSBEiJ_G0030866.1 mouse_genomes_project 7 14478117 14480106 - Fkrp protein_coding retained_intron MGP_WSBEiJ_T0084604.1 MGP_WSBEiJ_G0032011.1 mouse_genomes_project 7 116369862 116373357 + MGP_WSBEiJ_P0084604 Rassf10 protein_coding protein_coding MGP_WSBEiJ_T0008763.1 MGP_WSBEiJ_G0007083.1 mouse_genomes_project 7 73869732 73870072 - Gm28744 lincRNA lincRNA MGP_WSBEiJ_T0082186.1 MGP_WSBEiJ_G0031302.1 mouse_genomes_project 7 44180544 44234894 + MGP_WSBEiJ_P0082186 protein_coding protein_coding MGP_WSBEiJ_T0085569.1 MGP_WSBEiJ_G0032205.1 mouse_genomes_project 7 132061481 132064364 - Prss36 protein_coding processed_transcript MGP_WSBEiJ_T0085570.1 MGP_WSBEiJ_G0032205.1 mouse_genomes_project 7 132061481 132064324 - Prss36 protein_coding processed_transcript MGP_WSBEiJ_T0085571.1 MGP_WSBEiJ_G0032205.1 mouse_genomes_project 7 132061481 132077695 - MGP_WSBEiJ_P0085571 Prss36 protein_coding protein_coding MGP_WSBEiJ_T0085572.1 MGP_WSBEiJ_G0032205.1 mouse_genomes_project 7 132061481 132077695 - MGP_WSBEiJ_P0085572 Prss36 protein_coding protein_coding MGP_WSBEiJ_T0085573.1 MGP_WSBEiJ_G0032205.1 mouse_genomes_project 7 132061642 132064295 - MGP_WSBEiJ_P0085573 Prss36 protein_coding protein_coding MGP_WSBEiJ_T0085574.1 MGP_WSBEiJ_G0032205.1 mouse_genomes_project 7 132061745 132064274 - MGP_WSBEiJ_P0085574 Prss36 protein_coding protein_coding MGP_WSBEiJ_T0085575.1 MGP_WSBEiJ_G0032205.1 mouse_genomes_project 7 132061803 132064942 - Prss36 protein_coding retained_intron MGP_WSBEiJ_T0085576.1 MGP_WSBEiJ_G0032205.1 mouse_genomes_project 7 132061850 132064359 - Prss36 protein_coding processed_transcript MGP_WSBEiJ_T0081858.1 MGP_WSBEiJ_G0031218.1 mouse_genomes_project 7 33269893 33271292 + MGP_WSBEiJ_P0081858 Scgb1b27 protein_coding protein_coding MGP_WSBEiJ_T0081860.1 MGP_WSBEiJ_G0031218.1 mouse_genomes_project 7 33269977 33270860 + MGP_WSBEiJ_P0081860 Scgb1b27 protein_coding protein_coding MGP_WSBEiJ_T0084714.1 MGP_WSBEiJ_G0032032.1 mouse_genomes_project 7 120975508 121244868 + Xylt1 protein_coding retained_intron MGP_WSBEiJ_T0084715.1 MGP_WSBEiJ_G0032032.1 mouse_genomes_project 7 120975508 121285089 + MGP_WSBEiJ_P0084715 Xylt1 protein_coding protein_coding MGP_WSBEiJ_T0084716.1 MGP_WSBEiJ_G0032032.1 mouse_genomes_project 7 121075934 121150083 + Xylt1 protein_coding retained_intron MGP_WSBEiJ_T0083476.1 MGP_WSBEiJ_G0031593.1 mouse_genomes_project 7 84390487 84416401 + MGP_WSBEiJ_P0083476 Efl1 protein_coding protein_coding MGP_WSBEiJ_T0083477.1 MGP_WSBEiJ_G0031593.1 mouse_genomes_project 7 84390487 84518226 + MGP_WSBEiJ_P0083477 Efl1 protein_coding protein_coding MGP_WSBEiJ_T0083478.1 MGP_WSBEiJ_G0031593.1 mouse_genomes_project 7 84390502 84440876 + Efl1 protein_coding retained_intron MGP_WSBEiJ_T0083479.1 MGP_WSBEiJ_G0031593.1 mouse_genomes_project 7 84390514 84518226 + MGP_WSBEiJ_P0083479 Efl1 protein_coding protein_coding MGP_WSBEiJ_T0083480.1 MGP_WSBEiJ_G0031593.1 mouse_genomes_project 7 84412074 84416390 + Efl1 protein_coding processed_transcript MGP_WSBEiJ_T0086078.1 MGP_WSBEiJ_G0032335.1 mouse_genomes_project 7 145640118 145658315 - MGP_WSBEiJ_P0086078 Sirt3 protein_coding protein_coding MGP_WSBEiJ_T0086079.1 MGP_WSBEiJ_G0032335.1 mouse_genomes_project 7 145640118 145658755 - MGP_WSBEiJ_P0086079 Sirt3 protein_coding protein_coding MGP_WSBEiJ_T0086080.1 MGP_WSBEiJ_G0032335.1 mouse_genomes_project 7 145641468 145654593 - MGP_WSBEiJ_P0086080 Sirt3 protein_coding protein_coding MGP_WSBEiJ_T0086081.1 MGP_WSBEiJ_G0032335.1 mouse_genomes_project 7 145645938 145658315 - MGP_WSBEiJ_P0086081 Sirt3 protein_coding protein_coding MGP_WSBEiJ_T0086082.1 MGP_WSBEiJ_G0032335.1 mouse_genomes_project 7 145652879 145658315 - MGP_WSBEiJ_P0086082 Sirt3 protein_coding protein_coding MGP_WSBEiJ_T0083019.1 MGP_WSBEiJ_G0031508.1 mouse_genomes_project 7 68198347 68333087 - MGP_WSBEiJ_P0083019 Mef2a protein_coding protein_coding MGP_WSBEiJ_T0083020.1 MGP_WSBEiJ_G0031508.1 mouse_genomes_project 7 68199102 68333087 - MGP_WSBEiJ_P0083020 Mef2a protein_coding protein_coding MGP_WSBEiJ_T0083021.1 MGP_WSBEiJ_G0031508.1 mouse_genomes_project 7 68199268 68277324 - MGP_WSBEiJ_P0083021 Mef2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083022.1 MGP_WSBEiJ_G0031508.1 mouse_genomes_project 7 68201223 68333087 - MGP_WSBEiJ_P0083022 Mef2a protein_coding protein_coding MGP_WSBEiJ_T0083023.1 MGP_WSBEiJ_G0031508.1 mouse_genomes_project 7 68201331 68333087 - MGP_WSBEiJ_P0083023 Mef2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083024.1 MGP_WSBEiJ_G0031508.1 mouse_genomes_project 7 68201408 68333087 - MGP_WSBEiJ_P0083024 Mef2a protein_coding protein_coding MGP_WSBEiJ_T0083025.1 MGP_WSBEiJ_G0031508.1 mouse_genomes_project 7 68218984 68333087 - MGP_WSBEiJ_P0083025 Mef2a protein_coding protein_coding MGP_WSBEiJ_T0083026.1 MGP_WSBEiJ_G0031508.1 mouse_genomes_project 7 68308627 68333056 - Mef2a protein_coding processed_transcript MGP_WSBEiJ_T0082763.1 MGP_WSBEiJ_G0031453.1 mouse_genomes_project 7 51368853 51370194 + MGP_WSBEiJ_P0082763 4933405O20Rik protein_coding protein_coding MGP_WSBEiJ_T0084695.1 MGP_WSBEiJ_G0032029.1 mouse_genomes_project 7 119891316 119894003 - MGP_WSBEiJ_P0084695 Rps13 protein_coding protein_coding MGP_WSBEiJ_T0084696.1 MGP_WSBEiJ_G0032029.1 mouse_genomes_project 7 119891321 119893941 - MGP_WSBEiJ_P0084696 Rps13 protein_coding protein_coding MGP_WSBEiJ_T0084697.1 MGP_WSBEiJ_G0032029.1 mouse_genomes_project 7 119891322 119892990 - Rps13 protein_coding retained_intron MGP_WSBEiJ_T0084698.1 MGP_WSBEiJ_G0032029.1 mouse_genomes_project 7 119891323 119893938 - Rps13 protein_coding retained_intron MGP_WSBEiJ_T0084699.1 MGP_WSBEiJ_G0032029.1 mouse_genomes_project 7 119891323 119893943 - Rps13 protein_coding retained_intron MGP_WSBEiJ_T0084700.1 MGP_WSBEiJ_G0032029.1 mouse_genomes_project 7 119891323 119893974 - MGP_WSBEiJ_P0084700 Rps13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084701.1 MGP_WSBEiJ_G0032029.1 mouse_genomes_project 7 119891862 119893925 - Rps13 protein_coding retained_intron MGP_WSBEiJ_T0084702.1 MGP_WSBEiJ_G0032029.1 mouse_genomes_project 7 119892847 119893930 - Rps13 protein_coding retained_intron MGP_WSBEiJ_T0084403.1 MGP_WSBEiJ_G0031938.1 mouse_genomes_project 7 110676355 110705329 + MGP_WSBEiJ_P0084403 Olfml1 protein_coding protein_coding MGP_WSBEiJ_T0083579.1 MGP_WSBEiJ_G0031642.1 mouse_genomes_project 7 91839723 92026617 + Me3 protein_coding retained_intron MGP_WSBEiJ_T0083580.1 MGP_WSBEiJ_G0031642.1 mouse_genomes_project 7 91839865 91851789 + Me3 protein_coding processed_transcript MGP_WSBEiJ_T0083581.1 MGP_WSBEiJ_G0031642.1 mouse_genomes_project 7 91840034 92070158 + MGP_WSBEiJ_P0083581 Me3 protein_coding protein_coding MGP_WSBEiJ_T0083582.1 MGP_WSBEiJ_G0031642.1 mouse_genomes_project 7 91840217 92063226 + Me3 protein_coding retained_intron MGP_WSBEiJ_T0083583.1 MGP_WSBEiJ_G0031642.1 mouse_genomes_project 7 91957860 92037124 + Me3 protein_coding processed_transcript MGP_WSBEiJ_T0083584.1 MGP_WSBEiJ_G0031642.1 mouse_genomes_project 7 92042080 92067760 + MGP_WSBEiJ_P0083584 Me3 protein_coding protein_coding MGP_WSBEiJ_T0010742.1 MGP_WSBEiJ_G0008899.1 mouse_genomes_project 7 131828579 131828655 + Mir762 miRNA miRNA MGP_WSBEiJ_T0084773.1 MGP_WSBEiJ_G0032044.1 mouse_genomes_project 7 122534124 122548041 - MGP_WSBEiJ_P0084773 Knop1 protein_coding protein_coding MGP_WSBEiJ_T0084774.1 MGP_WSBEiJ_G0032044.1 mouse_genomes_project 7 122534124 122548041 - MGP_WSBEiJ_P0084774 Knop1 protein_coding protein_coding MGP_WSBEiJ_T0084775.1 MGP_WSBEiJ_G0032044.1 mouse_genomes_project 7 122534139 122548044 - MGP_WSBEiJ_P0084775 Knop1 protein_coding protein_coding MGP_WSBEiJ_T0084776.1 MGP_WSBEiJ_G0032044.1 mouse_genomes_project 7 122535692 122547727 - MGP_WSBEiJ_P0084776 Knop1 protein_coding protein_coding MGP_WSBEiJ_T0084777.1 MGP_WSBEiJ_G0032044.1 mouse_genomes_project 7 122537403 122547645 - MGP_WSBEiJ_P0084777 Knop1 protein_coding protein_coding MGP_WSBEiJ_T0084778.1 MGP_WSBEiJ_G0032044.1 mouse_genomes_project 7 122537657 122548297 - MGP_WSBEiJ_P0084778 Knop1 protein_coding protein_coding MGP_WSBEiJ_T0084779.1 MGP_WSBEiJ_G0032044.1 mouse_genomes_project 7 122544736 122546264 - MGP_WSBEiJ_P0084779 Knop1 protein_coding protein_coding MGP_WSBEiJ_T0080626.1 MGP_WSBEiJ_G0030908.1 mouse_genomes_project 7 17065113 17068933 + MGP_WSBEiJ_P0080626 Snrpd2 protein_coding protein_coding MGP_WSBEiJ_T0080627.1 MGP_WSBEiJ_G0030908.1 mouse_genomes_project 7 17065250 17066484 + Snrpd2 protein_coding retained_intron MGP_WSBEiJ_T0015352.1 MGP_WSBEiJ_G0013482.1 mouse_genomes_project 7 87809316 87809893 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081475.1 MGP_WSBEiJ_G0031133.1 mouse_genomes_project 7 28552552 28562139 + MGP_WSBEiJ_P0081475 Zfp84 protein_coding unknown_likely_coding MGP_WSBEiJ_T0015342.1 MGP_WSBEiJ_G0013472.1 mouse_genomes_project 7 80894343 80894551 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080808.1 MGP_WSBEiJ_G0030966.1 mouse_genomes_project 7 22280854 22288399 + MGP_WSBEiJ_P0080808 protein_coding protein_coding MGP_WSBEiJ_T0080809.1 MGP_WSBEiJ_G0030966.1 mouse_genomes_project 7 22280880 22290757 + MGP_WSBEiJ_P0080809 protein_coding protein_coding MGP_WSBEiJ_T0080810.1 MGP_WSBEiJ_G0030966.1 mouse_genomes_project 7 22283493 22291621 + MGP_WSBEiJ_P0080810 protein_coding protein_coding MGP_WSBEiJ_T0082057.1 MGP_WSBEiJ_G0031255.1 mouse_genomes_project 7 41112744 41253487 - MGP_WSBEiJ_P0082057 AI987944 protein_coding protein_coding MGP_WSBEiJ_T0082058.1 MGP_WSBEiJ_G0031255.1 mouse_genomes_project 7 41112744 41253435 - MGP_WSBEiJ_P0082058 AI987944 protein_coding protein_coding MGP_WSBEiJ_T0082059.1 MGP_WSBEiJ_G0031255.1 mouse_genomes_project 7 41113750 41253554 - MGP_WSBEiJ_P0082059 AI987944 protein_coding protein_coding MGP_WSBEiJ_T0080285.1 MGP_WSBEiJ_G0030805.1 mouse_genomes_project 7 10072985 10087421 - MGP_WSBEiJ_P0080285 Zfp329 protein_coding protein_coding MGP_WSBEiJ_T0080286.1 MGP_WSBEiJ_G0030805.1 mouse_genomes_project 7 10072990 10087425 - MGP_WSBEiJ_P0080286 Zfp329 protein_coding protein_coding MGP_WSBEiJ_T0080287.1 MGP_WSBEiJ_G0030805.1 mouse_genomes_project 7 10074082 10076105 - Zfp329 protein_coding processed_transcript MGP_WSBEiJ_T0080288.1 MGP_WSBEiJ_G0030805.1 mouse_genomes_project 7 10074130 10087419 - MGP_WSBEiJ_P0080288 Zfp329 protein_coding protein_coding MGP_WSBEiJ_T0008864.1 MGP_WSBEiJ_G0007147.1 mouse_genomes_project 7 129262687 129313249 - 4933440M02Rik lincRNA lincRNA MGP_WSBEiJ_T0008865.1 MGP_WSBEiJ_G0007147.1 mouse_genomes_project 7 129304642 129324616 - 4933440M02Rik lincRNA lincRNA MGP_WSBEiJ_T0008866.1 MGP_WSBEiJ_G0007147.1 mouse_genomes_project 7 129306781 129324632 - 4933440M02Rik lincRNA lincRNA MGP_WSBEiJ_T0099710.1 MGP_WSBEiJ_G0038373.1 mouse_genomes_project 7 45435214 45435304 - Snord35a snoRNA snoRNA MGP_WSBEiJ_T0099707.1 MGP_WSBEiJ_G0038370.1 mouse_genomes_project 7 44472955 44473045 + Snord88a snoRNA snoRNA MGP_WSBEiJ_T0008774.1 MGP_WSBEiJ_G0007092.1 mouse_genomes_project 7 74864796 74872289 + Gm44737 lincRNA lincRNA MGP_WSBEiJ_T0083832.1 MGP_WSBEiJ_G0031704.1 mouse_genomes_project 7 102526683 102603932 - MGP_WSBEiJ_P0083832 Rnf169 protein_coding protein_coding MGP_WSBEiJ_T0083833.1 MGP_WSBEiJ_G0031704.1 mouse_genomes_project 7 102542556 102583856 - Rnf169 protein_coding processed_transcript MGP_WSBEiJ_T0015278.1 MGP_WSBEiJ_G0013408.1 mouse_genomes_project 7 39205173 39205961 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101046.1 MGP_WSBEiJ_G0039503.1 mouse_genomes_project 7 44409991 44411154 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084611.1 MGP_WSBEiJ_G0032014.1 mouse_genomes_project 7 116827126 116830123 - MGP_WSBEiJ_P0084611 Pth protein_coding protein_coding MGP_WSBEiJ_T0010701.1 MGP_WSBEiJ_G0008858.1 mouse_genomes_project 7 62505999 62506079 - Mir344d-3 miRNA miRNA MGP_WSBEiJ_T0017770.1 MGP_WSBEiJ_G0015093.1 mouse_genomes_project 7 56923672 56934726 - Gm34121 processed_transcript lincRNA MGP_WSBEiJ_T0017771.1 MGP_WSBEiJ_G0015093.1 mouse_genomes_project 7 56931140 56934691 - Gm34121 processed_transcript retained_intron MGP_WSBEiJ_T0082917.1 MGP_WSBEiJ_G0031488.1 mouse_genomes_project 7 65269248 65285695 - MGP_WSBEiJ_P0082917 Mphosph10 protein_coding protein_coding MGP_WSBEiJ_T0082918.1 MGP_WSBEiJ_G0031488.1 mouse_genomes_project 7 65269997 65277949 - Mphosph10 protein_coding retained_intron MGP_WSBEiJ_T0082919.1 MGP_WSBEiJ_G0031488.1 mouse_genomes_project 7 65281414 65285663 - Mphosph10 protein_coding retained_intron MGP_WSBEiJ_T0008717.1 MGP_WSBEiJ_G0007048.1 mouse_genomes_project 7 40557559 40566800 + Gm28307 lincRNA lincRNA MGP_WSBEiJ_T0085420.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131587108 131593497 + MGP_WSBEiJ_P0085420 Prr14 protein_coding protein_coding MGP_WSBEiJ_T0085421.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131587760 131590596 + MGP_WSBEiJ_P0085421 Prr14 protein_coding protein_coding MGP_WSBEiJ_T0085422.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131587770 131590459 + MGP_WSBEiJ_P0085422 Prr14 protein_coding protein_coding MGP_WSBEiJ_T0085423.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131587793 131590567 + Prr14 protein_coding retained_intron MGP_WSBEiJ_T0085424.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131588190 131589846 + Prr14 protein_coding retained_intron MGP_WSBEiJ_T0085425.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131588231 131593496 + MGP_WSBEiJ_P0085425 Prr14 protein_coding protein_coding MGP_WSBEiJ_T0085426.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131588642 131591950 + Prr14 protein_coding retained_intron MGP_WSBEiJ_T0085427.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131590364 131592008 + MGP_WSBEiJ_P0085427 Prr14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085428.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131592238 131593495 + Prr14 protein_coding retained_intron MGP_WSBEiJ_T0085429.1 MGP_WSBEiJ_G0032178.1 mouse_genomes_project 7 131592256 131593493 + MGP_WSBEiJ_P0085429 Prr14 protein_coding protein_coding MGP_WSBEiJ_T0005134.1 MGP_WSBEiJ_G0004366.1 mouse_genomes_project 7 45903011 45904073 - antisense antisense MGP_WSBEiJ_T0082936.1 MGP_WSBEiJ_G0031492.1 mouse_genomes_project 7 65753781 65759727 - MGP_WSBEiJ_P0082936 Ndnl2 protein_coding protein_coding MGP_WSBEiJ_T0086477.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148565157 148612370 - MGP_WSBEiJ_P0086477 Cars protein_coding protein_coding MGP_WSBEiJ_T0086478.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148565634 148612336 - MGP_WSBEiJ_P0086478 Cars protein_coding protein_coding MGP_WSBEiJ_T0086479.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148569664 148577749 - Cars protein_coding processed_transcript MGP_WSBEiJ_T0086480.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148572510 148578515 - Cars protein_coding retained_intron MGP_WSBEiJ_T0086481.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148578325 148579592 - Cars protein_coding processed_transcript MGP_WSBEiJ_T0086482.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148579440 148583994 - Cars protein_coding retained_intron MGP_WSBEiJ_T0086483.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148596434 148609000 - Cars protein_coding processed_transcript MGP_WSBEiJ_T0086484.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148597835 148611961 - Cars protein_coding processed_transcript MGP_WSBEiJ_T0086485.1 MGP_WSBEiJ_G0032409.1 mouse_genomes_project 7 148603110 148612311 - Cars protein_coding processed_transcript MGP_WSBEiJ_T0008871.1 MGP_WSBEiJ_G0007151.1 mouse_genomes_project 7 130359291 130362515 - Gm45142 lincRNA lincRNA MGP_WSBEiJ_T0008872.1 MGP_WSBEiJ_G0007151.1 mouse_genomes_project 7 130361540 130362537 - Gm45142 lincRNA lincRNA MGP_WSBEiJ_T0002236.1 MGP_WSBEiJ_G0002154.1 mouse_genomes_project 7 81430183 81432436 - TEC TEC MGP_WSBEiJ_T0085343.1 MGP_WSBEiJ_G0032157.1 mouse_genomes_project 7 131082897 131084126 - MGP_WSBEiJ_P0085343 Kif22 protein_coding protein_coding MGP_WSBEiJ_T0085344.1 MGP_WSBEiJ_G0032157.1 mouse_genomes_project 7 131082899 131098203 - MGP_WSBEiJ_P0085344 Kif22 protein_coding protein_coding MGP_WSBEiJ_T0085345.1 MGP_WSBEiJ_G0032157.1 mouse_genomes_project 7 131082900 131083285 - Kif22 protein_coding retained_intron MGP_WSBEiJ_T0085346.1 MGP_WSBEiJ_G0032157.1 mouse_genomes_project 7 131084272 131087873 - Kif22 protein_coding retained_intron MGP_WSBEiJ_T0085347.1 MGP_WSBEiJ_G0032157.1 mouse_genomes_project 7 131087396 131098141 - Kif22 protein_coding retained_intron MGP_WSBEiJ_T0085348.1 MGP_WSBEiJ_G0032157.1 mouse_genomes_project 7 131088753 131098138 - MGP_WSBEiJ_P0085348 Kif22 protein_coding protein_coding MGP_WSBEiJ_T0082698.1 MGP_WSBEiJ_G0031431.1 mouse_genomes_project 7 47461932 47480960 - MGP_WSBEiJ_P0082698 Spty2d1 protein_coding protein_coding MGP_WSBEiJ_T0008786.1 MGP_WSBEiJ_G0007101.1 mouse_genomes_project 7 80265260 80267641 + 5330411O13Rik lincRNA lincRNA MGP_WSBEiJ_T0080648.1 MGP_WSBEiJ_G0030914.1 mouse_genomes_project 7 17207803 17211057 - MGP_WSBEiJ_P0080648 Ppm1n protein_coding protein_coding MGP_WSBEiJ_T0080649.1 MGP_WSBEiJ_G0030914.1 mouse_genomes_project 7 17207840 17209394 - Ppm1n protein_coding retained_intron MGP_WSBEiJ_T0080650.1 MGP_WSBEiJ_G0030914.1 mouse_genomes_project 7 17208813 17209148 - Ppm1n protein_coding retained_intron MGP_WSBEiJ_T0080651.1 MGP_WSBEiJ_G0030914.1 mouse_genomes_project 7 17209809 17210594 - Ppm1n protein_coding retained_intron MGP_WSBEiJ_T0084820.1 MGP_WSBEiJ_G0032058.1 mouse_genomes_project 7 123516977 123572833 + MGP_WSBEiJ_P0084820 2610020H08Rik protein_coding protein_coding MGP_WSBEiJ_T0084821.1 MGP_WSBEiJ_G0032058.1 mouse_genomes_project 7 123516981 123572833 + MGP_WSBEiJ_P0084821 2610020H08Rik protein_coding protein_coding MGP_WSBEiJ_T0084822.1 MGP_WSBEiJ_G0032058.1 mouse_genomes_project 7 123517122 123544810 + 2610020H08Rik protein_coding retained_intron MGP_WSBEiJ_T0084823.1 MGP_WSBEiJ_G0032058.1 mouse_genomes_project 7 123517351 123577038 + MGP_WSBEiJ_P0084823 2610020H08Rik protein_coding protein_coding MGP_WSBEiJ_T0084824.1 MGP_WSBEiJ_G0032058.1 mouse_genomes_project 7 123548452 123557116 + 2610020H08Rik protein_coding processed_transcript MGP_WSBEiJ_T0084825.1 MGP_WSBEiJ_G0032058.1 mouse_genomes_project 7 123549888 123552348 + 2610020H08Rik protein_coding retained_intron MGP_WSBEiJ_T0084826.1 MGP_WSBEiJ_G0032058.1 mouse_genomes_project 7 123558429 123567929 + 2610020H08Rik protein_coding processed_transcript MGP_WSBEiJ_T0084827.1 MGP_WSBEiJ_G0032058.1 mouse_genomes_project 7 123568095 123569326 + 2610020H08Rik protein_coding retained_intron MGP_WSBEiJ_T0083091.1 MGP_WSBEiJ_G0031521.1 mouse_genomes_project 7 75201531 75280712 - MGP_WSBEiJ_P0083091 St8sia2 protein_coding protein_coding MGP_WSBEiJ_T0083092.1 MGP_WSBEiJ_G0031521.1 mouse_genomes_project 7 75223982 75280728 - MGP_WSBEiJ_P0083092 St8sia2 protein_coding protein_coding MGP_WSBEiJ_T0085656.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132617395 132639564 - MGP_WSBEiJ_P0085656 Tial1 protein_coding protein_coding MGP_WSBEiJ_T0085657.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132617843 132639544 - Tial1 protein_coding retained_intron MGP_WSBEiJ_T0085658.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132619018 132639565 - MGP_WSBEiJ_P0085658 Tial1 protein_coding protein_coding MGP_WSBEiJ_T0085659.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132619410 132639215 - MGP_WSBEiJ_P0085659 Tial1 protein_coding protein_coding MGP_WSBEiJ_T0085660.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132619824 132622521 - MGP_WSBEiJ_P0085660 Tial1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085661.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132619895 132639247 - MGP_WSBEiJ_P0085661 Tial1 protein_coding protein_coding MGP_WSBEiJ_T0085662.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132619895 132639609 - MGP_WSBEiJ_P0085662 Tial1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085663.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132619895 132639101 - MGP_WSBEiJ_P0085663 Tial1 protein_coding protein_coding MGP_WSBEiJ_T0085664.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132619926 132639238 - MGP_WSBEiJ_P0085664 Tial1 protein_coding protein_coding MGP_WSBEiJ_T0085665.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132621429 132625955 - MGP_WSBEiJ_P0085665 Tial1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085666.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132621904 132623321 - Tial1 protein_coding retained_intron MGP_WSBEiJ_T0085667.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132622427 132632612 - MGP_WSBEiJ_P0085667 Tial1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085668.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132624378 132626179 - Tial1 protein_coding retained_intron MGP_WSBEiJ_T0085669.1 MGP_WSBEiJ_G0032221.1 mouse_genomes_project 7 132625456 132626487 - Tial1 protein_coding retained_intron MGP_WSBEiJ_T0015249.1 MGP_WSBEiJ_G0013379.1 mouse_genomes_project 7 22916976 22917314 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081310.1 MGP_WSBEiJ_G0031099.1 mouse_genomes_project 7 27196239 27197569 + MGP_WSBEiJ_P0081310 Sycn protein_coding protein_coding MGP_WSBEiJ_T0084790.1 MGP_WSBEiJ_G0032051.1 mouse_genomes_project 7 123228310 123248575 + MGP_WSBEiJ_P0084790 Acsm5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0080709.1 MGP_WSBEiJ_G0030931.1 mouse_genomes_project 7 17531258 17534628 + MGP_WSBEiJ_P0080709 Zfp296 protein_coding protein_coding MGP_WSBEiJ_T0083439.1 MGP_WSBEiJ_G0031584.1 mouse_genomes_project 7 83469948 83480651 - MGP_WSBEiJ_P0083439 3110040N11Rik protein_coding protein_coding MGP_WSBEiJ_T0083440.1 MGP_WSBEiJ_G0031584.1 mouse_genomes_project 7 83471024 83480674 - 3110040N11Rik protein_coding processed_transcript MGP_WSBEiJ_T0083441.1 MGP_WSBEiJ_G0031584.1 mouse_genomes_project 7 83471024 83479869 - 3110040N11Rik protein_coding processed_transcript MGP_WSBEiJ_T0083442.1 MGP_WSBEiJ_G0031584.1 mouse_genomes_project 7 83471043 83480314 - 3110040N11Rik protein_coding processed_transcript MGP_WSBEiJ_T0083443.1 MGP_WSBEiJ_G0031584.1 mouse_genomes_project 7 83471097 83480670 - MGP_WSBEiJ_P0083443 3110040N11Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0101036.1 MGP_WSBEiJ_G0039493.1 mouse_genomes_project 7 44182840 44184457 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081348.1 MGP_WSBEiJ_G0031109.1 mouse_genomes_project 7 27480108 27491165 + MGP_WSBEiJ_P0081348 Rinl protein_coding protein_coding MGP_WSBEiJ_T0085430.1 MGP_WSBEiJ_G0032179.1 mouse_genomes_project 7 131595932 131606804 + MGP_WSBEiJ_P0085430 protein_coding protein_coding MGP_WSBEiJ_T0085431.1 MGP_WSBEiJ_G0032179.1 mouse_genomes_project 7 131596748 131599953 + protein_coding processed_transcript MGP_WSBEiJ_T0085432.1 MGP_WSBEiJ_G0032179.1 mouse_genomes_project 7 131601951 131608033 + MGP_WSBEiJ_P0085432 protein_coding protein_coding MGP_WSBEiJ_T0085433.1 MGP_WSBEiJ_G0032179.1 mouse_genomes_project 7 131602138 131606068 + protein_coding retained_intron MGP_WSBEiJ_T0085434.1 MGP_WSBEiJ_G0032179.1 mouse_genomes_project 7 131602371 131606250 + MGP_WSBEiJ_P0085434 protein_coding protein_coding MGP_WSBEiJ_T0085435.1 MGP_WSBEiJ_G0032179.1 mouse_genomes_project 7 131602377 131606660 + MGP_WSBEiJ_P0085435 protein_coding protein_coding MGP_WSBEiJ_T0085436.1 MGP_WSBEiJ_G0032179.1 mouse_genomes_project 7 131603578 131608231 + protein_coding retained_intron MGP_WSBEiJ_T0085437.1 MGP_WSBEiJ_G0032179.1 mouse_genomes_project 7 131603792 131604683 + protein_coding retained_intron MGP_WSBEiJ_T0084866.1 MGP_WSBEiJ_G0032072.1 mouse_genomes_project 7 124516747 124589881 + MGP_WSBEiJ_P0084866 Vwa3a protein_coding protein_coding MGP_WSBEiJ_T0084867.1 MGP_WSBEiJ_G0032072.1 mouse_genomes_project 7 124516747 124572916 + MGP_WSBEiJ_P0084867 Vwa3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084868.1 MGP_WSBEiJ_G0032072.1 mouse_genomes_project 7 124517237 124590078 + MGP_WSBEiJ_P0084868 Vwa3a protein_coding protein_coding MGP_WSBEiJ_T0084869.1 MGP_WSBEiJ_G0032072.1 mouse_genomes_project 7 124517237 124589878 + MGP_WSBEiJ_P0084869 Vwa3a protein_coding protein_coding MGP_WSBEiJ_T0084870.1 MGP_WSBEiJ_G0032072.1 mouse_genomes_project 7 124517301 124590086 + MGP_WSBEiJ_P0084870 Vwa3a protein_coding unknown_likely_coding MGP_WSBEiJ_T0084871.1 MGP_WSBEiJ_G0032072.1 mouse_genomes_project 7 124564235 124572917 + MGP_WSBEiJ_P0084871 Vwa3a protein_coding protein_coding MGP_WSBEiJ_T0084872.1 MGP_WSBEiJ_G0032072.1 mouse_genomes_project 7 124565893 124572917 + Vwa3a protein_coding processed_transcript MGP_WSBEiJ_T0084873.1 MGP_WSBEiJ_G0032072.1 mouse_genomes_project 7 124568323 124575433 + MGP_WSBEiJ_P0084873 Vwa3a protein_coding protein_coding MGP_WSBEiJ_T0015339.1 MGP_WSBEiJ_G0013469.1 mouse_genomes_project 7 76749740 76750019 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008771.1 MGP_WSBEiJ_G0007090.1 mouse_genomes_project 7 74518562 74523372 + 4930429H19Rik lincRNA lincRNA MGP_WSBEiJ_T0008772.1 MGP_WSBEiJ_G0007090.1 mouse_genomes_project 7 74518712 74520137 + 4930429H19Rik lincRNA lincRNA MGP_WSBEiJ_T0010664.1 MGP_WSBEiJ_G0008821.1 mouse_genomes_project 7 22465906 22466032 - Gm27592 miRNA miRNA MGP_WSBEiJ_T0005231.1 MGP_WSBEiJ_G0004435.1 mouse_genomes_project 7 147632080 147642565 + Igf2os antisense antisense MGP_WSBEiJ_T0005232.1 MGP_WSBEiJ_G0004435.1 mouse_genomes_project 7 147632099 147633079 + Igf2os antisense antisense MGP_WSBEiJ_T0005233.1 MGP_WSBEiJ_G0004435.1 mouse_genomes_project 7 147637523 147638478 + Igf2os antisense antisense MGP_WSBEiJ_T0098488.1 MGP_WSBEiJ_G0037151.1 mouse_genomes_project 7 74881178 74881283 - Gm26176 snRNA snRNA MGP_WSBEiJ_T0015226.1 MGP_WSBEiJ_G0013356.1 mouse_genomes_project 7 10945827 10947402 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084482.1 MGP_WSBEiJ_G0031987.1 mouse_genomes_project 7 113028152 113053455 - MGP_WSBEiJ_P0084482 Nrip3 protein_coding protein_coding MGP_WSBEiJ_T0084483.1 MGP_WSBEiJ_G0031987.1 mouse_genomes_project 7 113028156 113052975 - MGP_WSBEiJ_P0084483 Nrip3 protein_coding protein_coding MGP_WSBEiJ_T0083972.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104399685 104459103 + Clpb protein_coding retained_intron MGP_WSBEiJ_T0083973.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104399685 104528785 + MGP_WSBEiJ_P0083973 Clpb protein_coding protein_coding MGP_WSBEiJ_T0083974.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104399757 104526418 + MGP_WSBEiJ_P0083974 Clpb protein_coding protein_coding MGP_WSBEiJ_T0083975.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104399809 104425148 + Clpb protein_coding retained_intron MGP_WSBEiJ_T0083976.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104399827 104442713 + MGP_WSBEiJ_P0083976 Clpb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083977.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104399828 104525060 + Clpb protein_coding retained_intron MGP_WSBEiJ_T0083978.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104418308 104501989 + MGP_WSBEiJ_P0083978 Clpb protein_coding protein_coding MGP_WSBEiJ_T0083979.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104419397 104489832 + MGP_WSBEiJ_P0083979 Clpb protein_coding protein_coding MGP_WSBEiJ_T0083980.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104501872 104507648 + Clpb protein_coding processed_transcript MGP_WSBEiJ_T0083981.1 MGP_WSBEiJ_G0031730.1 mouse_genomes_project 7 104501899 104523797 + Clpb protein_coding processed_transcript MGP_WSBEiJ_T0084397.1 MGP_WSBEiJ_G0031936.1 mouse_genomes_project 7 110309764 110311240 + MGP_WSBEiJ_P0084397 Rbmxl2 protein_coding protein_coding MGP_WSBEiJ_T0080079.1 MGP_WSBEiJ_G0030714.1 mouse_genomes_project 7 1547900 1550343 - MGP_WSBEiJ_P0080079 Tmem86b protein_coding protein_coding MGP_WSBEiJ_T0080080.1 MGP_WSBEiJ_G0030714.1 mouse_genomes_project 7 1547902 1550048 - MGP_WSBEiJ_P0080080 Tmem86b protein_coding protein_coding MGP_WSBEiJ_T0080081.1 MGP_WSBEiJ_G0030714.1 mouse_genomes_project 7 1548266 1551283 - MGP_WSBEiJ_P0080081 Tmem86b protein_coding protein_coding MGP_WSBEiJ_T0080082.1 MGP_WSBEiJ_G0030714.1 mouse_genomes_project 7 1548464 1550197 - MGP_WSBEiJ_P0080082 Tmem86b protein_coding protein_coding MGP_WSBEiJ_T0080953.1 MGP_WSBEiJ_G0031002.1 mouse_genomes_project 7 23332306 23384416 - MGP_WSBEiJ_P0080953 Pou2f2 protein_coding protein_coding MGP_WSBEiJ_T0080954.1 MGP_WSBEiJ_G0031002.1 mouse_genomes_project 7 23338226 23384416 - MGP_WSBEiJ_P0080954 Pou2f2 protein_coding protein_coding MGP_WSBEiJ_T0080955.1 MGP_WSBEiJ_G0031002.1 mouse_genomes_project 7 23338269 23384405 - MGP_WSBEiJ_P0080955 Pou2f2 protein_coding protein_coding MGP_WSBEiJ_T0080956.1 MGP_WSBEiJ_G0031002.1 mouse_genomes_project 7 23338426 23384488 - MGP_WSBEiJ_P0080956 Pou2f2 protein_coding protein_coding MGP_WSBEiJ_T0080957.1 MGP_WSBEiJ_G0031002.1 mouse_genomes_project 7 23338426 23373712 - MGP_WSBEiJ_P0080957 Pou2f2 protein_coding protein_coding MGP_WSBEiJ_T0080958.1 MGP_WSBEiJ_G0031002.1 mouse_genomes_project 7 23338997 23384440 - MGP_WSBEiJ_P0080958 Pou2f2 protein_coding protein_coding MGP_WSBEiJ_T0080959.1 MGP_WSBEiJ_G0031002.1 mouse_genomes_project 7 23346811 23372826 - MGP_WSBEiJ_P0080959 Pou2f2 protein_coding protein_coding MGP_WSBEiJ_T0080960.1 MGP_WSBEiJ_G0031002.1 mouse_genomes_project 7 23372585 23415201 - Pou2f2 protein_coding retained_intron MGP_WSBEiJ_T0080766.1 MGP_WSBEiJ_G0030944.1 mouse_genomes_project 7 17833837 17840193 + MGP_WSBEiJ_P0080766 Gm19345 protein_coding protein_coding MGP_WSBEiJ_T0015344.1 MGP_WSBEiJ_G0013474.1 mouse_genomes_project 7 82012748 82014279 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085688.1 MGP_WSBEiJ_G0032226.1 mouse_genomes_project 7 133477340 133620266 + MGP_WSBEiJ_P0085688 Plpp4 protein_coding protein_coding MGP_WSBEiJ_T0085689.1 MGP_WSBEiJ_G0032226.1 mouse_genomes_project 7 133477347 133550274 + Plpp4 protein_coding retained_intron MGP_WSBEiJ_T0085690.1 MGP_WSBEiJ_G0032226.1 mouse_genomes_project 7 133477356 133531439 + Plpp4 protein_coding processed_transcript MGP_WSBEiJ_T0085691.1 MGP_WSBEiJ_G0032226.1 mouse_genomes_project 7 133477358 133620161 + MGP_WSBEiJ_P0085691 Plpp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085692.1 MGP_WSBEiJ_G0032226.1 mouse_genomes_project 7 133477364 133619873 + MGP_WSBEiJ_P0085692 Plpp4 protein_coding protein_coding MGP_WSBEiJ_T0008897.1 MGP_WSBEiJ_G0007167.1 mouse_genomes_project 7 134204017 134220317 + Gm4265 lincRNA lincRNA MGP_WSBEiJ_T0084106.1 MGP_WSBEiJ_G0031763.1 mouse_genomes_project 7 105417169 105418123 + MGP_WSBEiJ_P0084106 Olfr554 protein_coding protein_coding MGP_WSBEiJ_T0080747.1 MGP_WSBEiJ_G0030941.1 mouse_genomes_project 7 17725788 17741058 - MGP_WSBEiJ_P0080747 Bcam protein_coding protein_coding MGP_WSBEiJ_T0080748.1 MGP_WSBEiJ_G0030941.1 mouse_genomes_project 7 17726216 17726611 - Bcam protein_coding retained_intron MGP_WSBEiJ_T0080749.1 MGP_WSBEiJ_G0030941.1 mouse_genomes_project 7 17734208 17741006 - Bcam protein_coding retained_intron MGP_WSBEiJ_T0080750.1 MGP_WSBEiJ_G0030941.1 mouse_genomes_project 7 17736119 17741527 - MGP_WSBEiJ_P0080750 Bcam protein_coding protein_coding MGP_WSBEiJ_T0080751.1 MGP_WSBEiJ_G0030941.1 mouse_genomes_project 7 17737493 17741006 - MGP_WSBEiJ_P0080751 Bcam protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080667.1 MGP_WSBEiJ_G0030919.1 mouse_genomes_project 7 17299067 17300635 + Ppp1r13l protein_coding processed_transcript MGP_WSBEiJ_T0080668.1 MGP_WSBEiJ_G0030919.1 mouse_genomes_project 7 17299088 17309342 + MGP_WSBEiJ_P0080668 Ppp1r13l protein_coding protein_coding MGP_WSBEiJ_T0080669.1 MGP_WSBEiJ_G0030919.1 mouse_genomes_project 7 17299964 17309338 + MGP_WSBEiJ_P0080669 Ppp1r13l protein_coding protein_coding MGP_WSBEiJ_T0080670.1 MGP_WSBEiJ_G0030919.1 mouse_genomes_project 7 17300534 17317944 + MGP_WSBEiJ_P0080670 Ppp1r13l protein_coding protein_coding MGP_WSBEiJ_T0080671.1 MGP_WSBEiJ_G0030919.1 mouse_genomes_project 7 17307902 17309316 + MGP_WSBEiJ_P0080671 Ppp1r13l protein_coding protein_coding MGP_WSBEiJ_T0015349.1 MGP_WSBEiJ_G0013479.1 mouse_genomes_project 7 84734764 84735082 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080522.1 MGP_WSBEiJ_G0030872.1 mouse_genomes_project 7 14582915 14591703 - MGP_WSBEiJ_P0080522 Calm3 protein_coding protein_coding MGP_WSBEiJ_T0080523.1 MGP_WSBEiJ_G0030872.1 mouse_genomes_project 7 14582937 14584822 - MGP_WSBEiJ_P0080523 Calm3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080524.1 MGP_WSBEiJ_G0030872.1 mouse_genomes_project 7 14583473 14584860 - MGP_WSBEiJ_P0080524 Calm3 protein_coding protein_coding MGP_WSBEiJ_T0080525.1 MGP_WSBEiJ_G0030872.1 mouse_genomes_project 7 14584800 14591418 - Calm3 protein_coding processed_transcript MGP_WSBEiJ_T0080815.1 MGP_WSBEiJ_G0030969.1 mouse_genomes_project 7 22372142 22379261 + MGP_WSBEiJ_P0080815 Zfp108 protein_coding protein_coding MGP_WSBEiJ_T0080816.1 MGP_WSBEiJ_G0030969.1 mouse_genomes_project 7 22372145 22379191 + MGP_WSBEiJ_P0080816 Zfp108 protein_coding protein_coding MGP_WSBEiJ_T0080817.1 MGP_WSBEiJ_G0030969.1 mouse_genomes_project 7 22373960 22378730 + MGP_WSBEiJ_P0080817 Zfp108 protein_coding protein_coding MGP_WSBEiJ_T0086037.1 MGP_WSBEiJ_G0032310.1 mouse_genomes_project 7 144947469 144998010 + MGP_WSBEiJ_P0086037 5830411N06Rik protein_coding protein_coding MGP_WSBEiJ_T0086038.1 MGP_WSBEiJ_G0032310.1 mouse_genomes_project 7 144947546 145000160 + MGP_WSBEiJ_P0086038 5830411N06Rik protein_coding protein_coding MGP_WSBEiJ_T0086039.1 MGP_WSBEiJ_G0032310.1 mouse_genomes_project 7 144947549 145000160 + MGP_WSBEiJ_P0086039 5830411N06Rik protein_coding protein_coding MGP_WSBEiJ_T0083071.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74646757 74769476 - MGP_WSBEiJ_P0083071 Chd2 protein_coding protein_coding MGP_WSBEiJ_T0083072.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74646813 74690566 - MGP_WSBEiJ_P0083072 Chd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083073.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74650107 74667068 - MGP_WSBEiJ_P0083073 Chd2 protein_coding protein_coding MGP_WSBEiJ_T0083074.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74669078 74675427 - MGP_WSBEiJ_P0083074 Chd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083075.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74671647 74681561 - Chd2 protein_coding processed_transcript MGP_WSBEiJ_T0083076.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74697462 74703897 - Chd2 protein_coding processed_transcript MGP_WSBEiJ_T0083077.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74697468 74703899 - MGP_WSBEiJ_P0083077 Chd2 protein_coding protein_coding MGP_WSBEiJ_T0083078.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74697469 74701723 - Chd2 protein_coding retained_intron MGP_WSBEiJ_T0083079.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74722001 74726407 - MGP_WSBEiJ_P0083079 Chd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083080.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74723936 74726326 - MGP_WSBEiJ_P0083080 Chd2 protein_coding protein_coding MGP_WSBEiJ_T0083081.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74725274 74769475 - MGP_WSBEiJ_P0083081 Chd2 protein_coding protein_coding MGP_WSBEiJ_T0083082.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74726227 74727713 - Chd2 protein_coding retained_intron MGP_WSBEiJ_T0083083.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74732009 74765356 - MGP_WSBEiJ_P0083083 Chd2 protein_coding protein_coding MGP_WSBEiJ_T0083084.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74732039 74769466 - MGP_WSBEiJ_P0083084 Chd2 protein_coding protein_coding MGP_WSBEiJ_T0083085.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74765824 74769560 - Chd2 protein_coding retained_intron MGP_WSBEiJ_T0083086.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74767088 74769476 - Chd2 protein_coding processed_transcript MGP_WSBEiJ_T0083087.1 MGP_WSBEiJ_G0031519.1 mouse_genomes_project 7 74767532 74769255 - Chd2 protein_coding processed_transcript MGP_WSBEiJ_T0098518.1 MGP_WSBEiJ_G0037181.1 mouse_genomes_project 7 132205888 132206044 - Gm22809 snRNA snRNA MGP_WSBEiJ_T0082824.1 MGP_WSBEiJ_G0031467.1 mouse_genomes_project 7 56934947 56952490 + MGP_WSBEiJ_P0082824 Herc2 protein_coding protein_coding MGP_WSBEiJ_T0082825.1 MGP_WSBEiJ_G0031467.1 mouse_genomes_project 7 56935004 57118814 + MGP_WSBEiJ_P0082825 Herc2 protein_coding protein_coding MGP_WSBEiJ_T0082826.1 MGP_WSBEiJ_G0031467.1 mouse_genomes_project 7 56935140 57118777 + MGP_WSBEiJ_P0082826 Herc2 protein_coding protein_coding MGP_WSBEiJ_T0082827.1 MGP_WSBEiJ_G0031467.1 mouse_genomes_project 7 56935517 56998068 + MGP_WSBEiJ_P0082827 Herc2 protein_coding protein_coding MGP_WSBEiJ_T0082828.1 MGP_WSBEiJ_G0031467.1 mouse_genomes_project 7 56935629 57118146 + MGP_WSBEiJ_P0082828 Herc2 protein_coding protein_coding MGP_WSBEiJ_T0082829.1 MGP_WSBEiJ_G0031467.1 mouse_genomes_project 7 56935699 56957440 + Herc2 protein_coding retained_intron MGP_WSBEiJ_T0082830.1 MGP_WSBEiJ_G0031467.1 mouse_genomes_project 7 57043663 57048918 + Herc2 protein_coding processed_transcript MGP_WSBEiJ_T0082831.1 MGP_WSBEiJ_G0031467.1 mouse_genomes_project 7 57107513 57118115 + MGP_WSBEiJ_P0082831 Herc2 protein_coding protein_coding MGP_WSBEiJ_T0015419.1 MGP_WSBEiJ_G0013549.1 mouse_genomes_project 7 133194557 133195243 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015312.1 MGP_WSBEiJ_G0013442.1 mouse_genomes_project 7 56357093 56357639 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080167.1 MGP_WSBEiJ_G0030738.1 mouse_genomes_project 7 1973213 1986050 + MGP_WSBEiJ_P0080167 Zfp865 protein_coding protein_coding MGP_WSBEiJ_T0083118.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79604847 80016567 - MGP_WSBEiJ_P0083118 Ntrk3 protein_coding protein_coding MGP_WSBEiJ_T0083119.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79609566 79621426 - MGP_WSBEiJ_P0083119 Ntrk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083120.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79621062 80015942 - MGP_WSBEiJ_P0083120 Ntrk3 protein_coding protein_coding MGP_WSBEiJ_T0083121.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79621089 80015948 - MGP_WSBEiJ_P0083121 Ntrk3 protein_coding protein_coding MGP_WSBEiJ_T0083122.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79677590 79694198 - MGP_WSBEiJ_P0083122 Ntrk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083123.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79730884 80016141 - MGP_WSBEiJ_P0083123 Ntrk3 protein_coding protein_coding MGP_WSBEiJ_T0083124.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79732517 79811944 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083125.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79732825 79786489 - MGP_WSBEiJ_P0083125 Ntrk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083126.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79786450 79886613 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083127.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79884115 80016134 - Ntrk3 protein_coding retained_intron MGP_WSBEiJ_T0083128.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79913550 80010049 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083129.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79953165 80064105 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083130.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 79953899 80016562 - MGP_WSBEiJ_P0083130 Ntrk3 protein_coding protein_coding MGP_WSBEiJ_T0083131.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 80015694 80098127 - MGP_WSBEiJ_P0083131 Ntrk3 protein_coding protein_coding MGP_WSBEiJ_T0083132.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 80019220 80160558 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083133.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 80025368 80181569 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083134.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 80032456 80098512 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083135.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 80169062 80181571 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083136.1 MGP_WSBEiJ_G0031527.1 mouse_genomes_project 7 80174032 80181571 - Ntrk3 protein_coding processed_transcript MGP_WSBEiJ_T0101118.1 MGP_WSBEiJ_G0039575.1 mouse_genomes_project 7 108726162 109354109 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085769.1 MGP_WSBEiJ_G0032240.1 mouse_genomes_project 7 135660516 135682001 - MGP_WSBEiJ_P0085769 2310057M21Rik protein_coding protein_coding MGP_WSBEiJ_T0098520.1 MGP_WSBEiJ_G0037183.1 mouse_genomes_project 7 134277613 134277723 + Gm23847 snRNA snRNA MGP_WSBEiJ_T0011502.1 MGP_WSBEiJ_G0009659.1 mouse_genomes_project 7 148272633 148272828 + Gm27389 misc_RNA misc_RNA MGP_WSBEiJ_T0083494.1 MGP_WSBEiJ_G0031599.1 mouse_genomes_project 7 85424474 85437120 - Il16 protein_coding retained_intron MGP_WSBEiJ_T0083495.1 MGP_WSBEiJ_G0031599.1 mouse_genomes_project 7 85424690 85520075 - MGP_WSBEiJ_P0083495 Il16 protein_coding protein_coding MGP_WSBEiJ_T0083496.1 MGP_WSBEiJ_G0031599.1 mouse_genomes_project 7 85431199 85436950 - Il16 protein_coding retained_intron MGP_WSBEiJ_T0083497.1 MGP_WSBEiJ_G0031599.1 mouse_genomes_project 7 85442516 85531415 - MGP_WSBEiJ_P0083497 Il16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083498.1 MGP_WSBEiJ_G0031599.1 mouse_genomes_project 7 85505001 85514889 - MGP_WSBEiJ_P0083498 Il16 protein_coding protein_coding MGP_WSBEiJ_T0083499.1 MGP_WSBEiJ_G0031599.1 mouse_genomes_project 7 85505001 85525616 - MGP_WSBEiJ_P0083499 Il16 protein_coding protein_coding MGP_WSBEiJ_T0084022.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104663912 104675414 - MGP_WSBEiJ_P0084022 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084023.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104663917 104674976 - MGP_WSBEiJ_P0084023 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084024.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104663917 104675427 - MGP_WSBEiJ_P0084024 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084025.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104663918 104687988 - MGP_WSBEiJ_P0084025 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084026.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104663918 104688050 - MGP_WSBEiJ_P0084026 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084027.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104663918 104675401 - MGP_WSBEiJ_P0084027 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084028.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104663922 104675385 - MGP_WSBEiJ_P0084028 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084029.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104663929 104688077 - Lrrc51 protein_coding processed_transcript MGP_WSBEiJ_T0084030.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104664086 104687984 - MGP_WSBEiJ_P0084030 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084031.1 MGP_WSBEiJ_G0031738.1 mouse_genomes_project 7 104664102 104688012 - MGP_WSBEiJ_P0084031 Lrrc51 protein_coding protein_coding MGP_WSBEiJ_T0084752.1 MGP_WSBEiJ_G0032041.1 mouse_genomes_project 7 122374165 122393166 - MGP_WSBEiJ_P0084752 Gde1 protein_coding protein_coding MGP_WSBEiJ_T0084753.1 MGP_WSBEiJ_G0032041.1 mouse_genomes_project 7 122377203 122392768 - MGP_WSBEiJ_P0084753 Gde1 protein_coding protein_coding MGP_WSBEiJ_T0084231.1 MGP_WSBEiJ_G0031858.1 mouse_genomes_project 7 107362023 107362965 + MGP_WSBEiJ_P0084231 Olfr651 protein_coding protein_coding MGP_WSBEiJ_T0010654.1 MGP_WSBEiJ_G0008811.1 mouse_genomes_project 7 99725 99794 + Mir295 miRNA miRNA MGP_WSBEiJ_T0086334.1 MGP_WSBEiJ_G0032386.1 mouse_genomes_project 7 147107482 147109655 + MGP_WSBEiJ_P0086334 protein_coding protein_coding MGP_WSBEiJ_T0081011.1 MGP_WSBEiJ_G0031017.1 mouse_genomes_project 7 23950072 23951345 - MGP_WSBEiJ_P0081011 Erich4 protein_coding protein_coding MGP_WSBEiJ_T0081736.1 MGP_WSBEiJ_G0031195.1 mouse_genomes_project 7 29725652 29730977 - MGP_WSBEiJ_P0081736 Ffar1 protein_coding protein_coding MGP_WSBEiJ_T0084322.1 MGP_WSBEiJ_G0031902.1 mouse_genomes_project 7 108534350 108552676 + Dnhd1 protein_coding processed_transcript MGP_WSBEiJ_T0084328.1 MGP_WSBEiJ_G0031902.1 mouse_genomes_project 7 108534367 108578060 + Dnhd1 protein_coding processed_transcript MGP_WSBEiJ_T0084332.1 MGP_WSBEiJ_G0031902.1 mouse_genomes_project 7 108544449 108615649 + MGP_WSBEiJ_P0084332 Dnhd1 protein_coding protein_coding MGP_WSBEiJ_T0084333.1 MGP_WSBEiJ_G0031902.1 mouse_genomes_project 7 108544830 108615617 + MGP_WSBEiJ_P0084333 Dnhd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084334.1 MGP_WSBEiJ_G0031902.1 mouse_genomes_project 7 108567632 108571866 + Dnhd1 protein_coding retained_intron MGP_WSBEiJ_T0084335.1 MGP_WSBEiJ_G0031902.1 mouse_genomes_project 7 108571689 108578053 + MGP_WSBEiJ_P0084335 Dnhd1 protein_coding protein_coding MGP_WSBEiJ_T0083597.1 MGP_WSBEiJ_G0031648.1 mouse_genomes_project 7 92475055 92516636 - MGP_WSBEiJ_P0083597 Ccdc83 protein_coding protein_coding MGP_WSBEiJ_T0083598.1 MGP_WSBEiJ_G0031648.1 mouse_genomes_project 7 92485722 92516636 - MGP_WSBEiJ_P0083598 Ccdc83 protein_coding protein_coding MGP_WSBEiJ_T0083599.1 MGP_WSBEiJ_G0031648.1 mouse_genomes_project 7 92487078 92516636 - MGP_WSBEiJ_P0083599 Ccdc83 protein_coding protein_coding MGP_WSBEiJ_T0015327.1 MGP_WSBEiJ_G0013457.1 mouse_genomes_project 7 67053388 67054134 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083137.1 MGP_WSBEiJ_G0031528.1 mouse_genomes_project 7 80220082 80228926 - MGP_WSBEiJ_P0083137 Mrpl46 protein_coding protein_coding MGP_WSBEiJ_T0083138.1 MGP_WSBEiJ_G0031528.1 mouse_genomes_project 7 80220446 80229368 - Mrpl46 protein_coding processed_transcript MGP_WSBEiJ_T0083483.1 MGP_WSBEiJ_G0031596.1 mouse_genomes_project 7 85321011 85329822 - MGP_WSBEiJ_P0083483 protein_coding protein_coding MGP_WSBEiJ_T0080022.1 MGP_WSBEiJ_G0030706.1 mouse_genomes_project 7 1337998 1358965 - MGP_WSBEiJ_P0080022 Rdh13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080023.1 MGP_WSBEiJ_G0030706.1 mouse_genomes_project 7 1338895 1359013 - MGP_WSBEiJ_P0080023 Rdh13 protein_coding protein_coding MGP_WSBEiJ_T0080024.1 MGP_WSBEiJ_G0030706.1 mouse_genomes_project 7 1348412 1358545 - MGP_WSBEiJ_P0080024 Rdh13 protein_coding protein_coding MGP_WSBEiJ_T0080025.1 MGP_WSBEiJ_G0030706.1 mouse_genomes_project 7 1353773 1358957 - Rdh13 protein_coding retained_intron MGP_WSBEiJ_T0080026.1 MGP_WSBEiJ_G0030706.1 mouse_genomes_project 7 1356017 1359006 - Rdh13 protein_coding processed_transcript MGP_WSBEiJ_T0080027.1 MGP_WSBEiJ_G0030706.1 mouse_genomes_project 7 1357568 1358990 - Rdh13 protein_coding processed_transcript MGP_WSBEiJ_T0100982.1 MGP_WSBEiJ_G0039439.1 mouse_genomes_project 7 10823822 10824258 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008754.1 MGP_WSBEiJ_G0007074.1 mouse_genomes_project 7 71361355 71362155 - Gm29327 lincRNA lincRNA MGP_WSBEiJ_T0084850.1 MGP_WSBEiJ_G0032067.1 mouse_genomes_project 7 124073516 124107355 + Abca15 protein_coding retained_intron MGP_WSBEiJ_T0084851.1 MGP_WSBEiJ_G0032067.1 mouse_genomes_project 7 124073516 124157696 + MGP_WSBEiJ_P0084851 Abca15 protein_coding protein_coding MGP_WSBEiJ_T0084852.1 MGP_WSBEiJ_G0032067.1 mouse_genomes_project 7 124073516 124157696 + MGP_WSBEiJ_P0084852 Abca15 protein_coding protein_coding MGP_WSBEiJ_T0101003.1 MGP_WSBEiJ_G0039460.1 mouse_genomes_project 7 14865909 14866900 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080999.1 MGP_WSBEiJ_G0031012.1 mouse_genomes_project 7 23651586 23653669 - MGP_WSBEiJ_P0080999 Cnfn protein_coding protein_coding MGP_WSBEiJ_T0081000.1 MGP_WSBEiJ_G0031012.1 mouse_genomes_project 7 23651588 23653690 - MGP_WSBEiJ_P0081000 Cnfn protein_coding protein_coding MGP_WSBEiJ_T0080789.1 MGP_WSBEiJ_G0030960.1 mouse_genomes_project 7 21845851 21848218 + MGP_WSBEiJ_P0080789 Vmn1r172 protein_coding protein_coding MGP_WSBEiJ_T0080790.1 MGP_WSBEiJ_G0030960.1 mouse_genomes_project 7 21845956 21848216 + MGP_WSBEiJ_P0080790 Vmn1r172 protein_coding protein_coding MGP_WSBEiJ_T0080992.1 MGP_WSBEiJ_G0031009.1 mouse_genomes_project 7 23573954 23576676 + MGP_WSBEiJ_P0080992 Prr19 protein_coding protein_coding MGP_WSBEiJ_T0080552.1 MGP_WSBEiJ_G0030884.1 mouse_genomes_project 7 15826190 15832075 + MGP_WSBEiJ_P0080552 Ceacam12 protein_coding protein_coding MGP_WSBEiJ_T0080553.1 MGP_WSBEiJ_G0030884.1 mouse_genomes_project 7 15826200 15838248 + MGP_WSBEiJ_P0080553 Ceacam12 protein_coding protein_coding MGP_WSBEiJ_T0080554.1 MGP_WSBEiJ_G0030884.1 mouse_genomes_project 7 15826252 15830689 + MGP_WSBEiJ_P0080554 Ceacam12 protein_coding protein_coding MGP_WSBEiJ_T0086405.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147621276 147629023 - MGP_WSBEiJ_P0086405 Igf2 protein_coding protein_coding MGP_WSBEiJ_T0086406.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147621279 147631877 - MGP_WSBEiJ_P0086406 Igf2 protein_coding protein_coding MGP_WSBEiJ_T0086407.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147621279 147628993 - MGP_WSBEiJ_P0086407 Igf2 protein_coding protein_coding MGP_WSBEiJ_T0086408.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147621279 147633689 - MGP_WSBEiJ_P0086408 Igf2 protein_coding protein_coding MGP_WSBEiJ_T0086409.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147621353 147624557 - Igf2 protein_coding processed_transcript MGP_WSBEiJ_T0086410.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147625282 147639202 - MGP_WSBEiJ_P0086410 Igf2 protein_coding protein_coding MGP_WSBEiJ_T0086411.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147625575 147634254 - MGP_WSBEiJ_P0086411 Igf2 protein_coding protein_coding MGP_WSBEiJ_T0086412.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147625878 147627545 - MGP_WSBEiJ_P0086412 Igf2 protein_coding protein_coding MGP_WSBEiJ_T0086413.1 MGP_WSBEiJ_G0032395.1 mouse_genomes_project 7 147626968 147633589 - Igf2 protein_coding retained_intron MGP_WSBEiJ_T0080577.1 MGP_WSBEiJ_G0030895.1 mouse_genomes_project 7 16816981 16853649 + MGP_WSBEiJ_P0080577 Nova2 protein_coding protein_coding MGP_WSBEiJ_T0081256.1 MGP_WSBEiJ_G0031082.1 mouse_genomes_project 7 26781842 26789660 + MGP_WSBEiJ_P0081256 Dyrk1b protein_coding protein_coding MGP_WSBEiJ_T0081257.1 MGP_WSBEiJ_G0031082.1 mouse_genomes_project 7 26781867 26789289 + MGP_WSBEiJ_P0081257 Dyrk1b protein_coding protein_coding MGP_WSBEiJ_T0081258.1 MGP_WSBEiJ_G0031082.1 mouse_genomes_project 7 26782639 26789660 + MGP_WSBEiJ_P0081258 Dyrk1b protein_coding protein_coding MGP_WSBEiJ_T0081259.1 MGP_WSBEiJ_G0031082.1 mouse_genomes_project 7 26782689 26789309 + MGP_WSBEiJ_P0081259 Dyrk1b protein_coding protein_coding MGP_WSBEiJ_T0085016.1 MGP_WSBEiJ_G0032105.1 mouse_genomes_project 7 129424513 129442139 + MGP_WSBEiJ_P0085016 Kdm8 protein_coding protein_coding MGP_WSBEiJ_T0085017.1 MGP_WSBEiJ_G0032105.1 mouse_genomes_project 7 129424521 129439893 + MGP_WSBEiJ_P0085017 Kdm8 protein_coding protein_coding MGP_WSBEiJ_T0017738.1 MGP_WSBEiJ_G0015080.1 mouse_genomes_project 7 26191631 26193315 - Gm44685 processed_transcript processed_transcript MGP_WSBEiJ_T0081435.1 MGP_WSBEiJ_G0031126.1 mouse_genomes_project 7 27983411 27992778 + MGP_WSBEiJ_P0081435 Yif1b protein_coding protein_coding MGP_WSBEiJ_T0081436.1 MGP_WSBEiJ_G0031126.1 mouse_genomes_project 7 27983435 27992778 + MGP_WSBEiJ_P0081436 Yif1b protein_coding protein_coding MGP_WSBEiJ_T0081437.1 MGP_WSBEiJ_G0031126.1 mouse_genomes_project 7 27983451 27990088 + MGP_WSBEiJ_P0081437 Yif1b protein_coding protein_coding MGP_WSBEiJ_T0081438.1 MGP_WSBEiJ_G0031126.1 mouse_genomes_project 7 27983534 27992842 + MGP_WSBEiJ_P0081438 Yif1b protein_coding protein_coding MGP_WSBEiJ_T0081439.1 MGP_WSBEiJ_G0031126.1 mouse_genomes_project 7 27983555 27991241 + Yif1b protein_coding processed_transcript MGP_WSBEiJ_T0086170.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146101662 146105378 - MGP_WSBEiJ_P0086170 Irf7 protein_coding protein_coding MGP_WSBEiJ_T0086171.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146102139 146105438 - MGP_WSBEiJ_P0086171 Irf7 protein_coding protein_coding MGP_WSBEiJ_T0086172.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146102140 146105380 - MGP_WSBEiJ_P0086172 Irf7 protein_coding protein_coding MGP_WSBEiJ_T0086173.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146102143 146105379 - Irf7 protein_coding retained_intron MGP_WSBEiJ_T0086174.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146102388 146104249 - MGP_WSBEiJ_P0086174 Irf7 protein_coding protein_coding MGP_WSBEiJ_T0086175.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146102747 146104088 - Irf7 protein_coding retained_intron MGP_WSBEiJ_T0086176.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146102929 146105001 - Irf7 protein_coding processed_transcript MGP_WSBEiJ_T0086177.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146103179 146104430 - Irf7 protein_coding retained_intron MGP_WSBEiJ_T0086178.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146103756 146104664 - Irf7 protein_coding retained_intron MGP_WSBEiJ_T0086179.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146104171 146104941 - Irf7 protein_coding retained_intron MGP_WSBEiJ_T0086180.1 MGP_WSBEiJ_G0032357.1 mouse_genomes_project 7 146104332 146105378 - Irf7 protein_coding processed_transcript MGP_WSBEiJ_T0100974.1 MGP_WSBEiJ_G0039431.1 mouse_genomes_project 7 9385108 9386371 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085797.1 MGP_WSBEiJ_G0032249.1 mouse_genomes_project 7 136590931 136673751 - MGP_WSBEiJ_P0085797 Chst15 protein_coding protein_coding MGP_WSBEiJ_T0085798.1 MGP_WSBEiJ_G0032249.1 mouse_genomes_project 7 136590931 136673244 - MGP_WSBEiJ_P0085798 Chst15 protein_coding protein_coding MGP_WSBEiJ_T0085799.1 MGP_WSBEiJ_G0032249.1 mouse_genomes_project 7 136590956 136628852 - MGP_WSBEiJ_P0085799 Chst15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0085800.1 MGP_WSBEiJ_G0032249.1 mouse_genomes_project 7 136627005 136635035 - Chst15 protein_coding processed_transcript MGP_WSBEiJ_T0080835.1 MGP_WSBEiJ_G0030974.1 mouse_genomes_project 7 22481613 22488723 + MGP_WSBEiJ_P0080835 Lypd5 protein_coding protein_coding MGP_WSBEiJ_T0015299.1 MGP_WSBEiJ_G0013429.1 mouse_genomes_project 7 43560032 43560762 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084207.1 MGP_WSBEiJ_G0031851.1 mouse_genomes_project 7 107130774 107143198 + MGP_WSBEiJ_P0084207 protein_coding protein_coding MGP_WSBEiJ_T0084210.1 MGP_WSBEiJ_G0031851.1 mouse_genomes_project 7 107133930 107142906 + MGP_WSBEiJ_P0084210 protein_coding protein_coding MGP_WSBEiJ_T0084211.1 MGP_WSBEiJ_G0031851.1 mouse_genomes_project 7 107133930 107142906 + MGP_WSBEiJ_P0084211 protein_coding protein_coding MGP_WSBEiJ_T0080190.1 MGP_WSBEiJ_G0030753.1 mouse_genomes_project 7 2926663 2927626 - MGP_WSBEiJ_P0080190 Vmn1r64 protein_coding protein_coding MGP_WSBEiJ_T0080129.1 MGP_WSBEiJ_G0030724.1 mouse_genomes_project 7 1719647 1724747 - MGP_WSBEiJ_P0080129 Tmem238 protein_coding protein_coding MGP_WSBEiJ_T0080130.1 MGP_WSBEiJ_G0030724.1 mouse_genomes_project 7 1720262 1724164 - MGP_WSBEiJ_P0080130 Tmem238 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080728.1 MGP_WSBEiJ_G0030937.1 mouse_genomes_project 7 17650011 17653749 - MGP_WSBEiJ_P0080728 Apoc1 protein_coding protein_coding MGP_WSBEiJ_T0080729.1 MGP_WSBEiJ_G0030937.1 mouse_genomes_project 7 17650011 17653811 - MGP_WSBEiJ_P0080729 Apoc1 protein_coding protein_coding MGP_WSBEiJ_T0083163.1 MGP_WSBEiJ_G0031534.1 mouse_genomes_project 7 80580853 80596302 - MGP_WSBEiJ_P0083163 Hapln3 protein_coding protein_coding MGP_WSBEiJ_T0083164.1 MGP_WSBEiJ_G0031534.1 mouse_genomes_project 7 80581489 80596279 - MGP_WSBEiJ_P0083164 Hapln3 protein_coding protein_coding MGP_WSBEiJ_T0083165.1 MGP_WSBEiJ_G0031534.1 mouse_genomes_project 7 80582772 80596297 - MGP_WSBEiJ_P0083165 Hapln3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083166.1 MGP_WSBEiJ_G0031534.1 mouse_genomes_project 7 80587504 80593952 - Hapln3 protein_coding processed_transcript MGP_WSBEiJ_T0101078.1 MGP_WSBEiJ_G0039535.1 mouse_genomes_project 7 87429676 87434737 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080403.1 MGP_WSBEiJ_G0030842.1 mouse_genomes_project 7 13484501 13489515 - MGP_WSBEiJ_P0080403 protein_coding protein_coding MGP_WSBEiJ_T0086313.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146823040 146883718 + MGP_WSBEiJ_P0086313 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0086314.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146823040 146888959 + MGP_WSBEiJ_P0086314 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0086315.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146825364 146883885 + MGP_WSBEiJ_P0086315 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0086316.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146825446 146887642 + MGP_WSBEiJ_P0086316 Brsk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086317.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146825522 146885663 + MGP_WSBEiJ_P0086317 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0086318.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146825525 146888960 + MGP_WSBEiJ_P0086318 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0086319.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146825525 146886945 + MGP_WSBEiJ_P0086319 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0086320.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146866251 146886860 + MGP_WSBEiJ_P0086320 Brsk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086321.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146869563 146886860 + MGP_WSBEiJ_P0086321 Brsk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086322.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146869603 146887884 + MGP_WSBEiJ_P0086322 Brsk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086323.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146870424 146886860 + MGP_WSBEiJ_P0086323 Brsk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086324.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146877866 146886863 + MGP_WSBEiJ_P0086324 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0086325.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146877922 146887189 + MGP_WSBEiJ_P0086325 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0086326.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146882182 146888780 + Brsk2 protein_coding processed_transcript MGP_WSBEiJ_T0086327.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146882210 146887388 + Brsk2 protein_coding processed_transcript MGP_WSBEiJ_T0086328.1 MGP_WSBEiJ_G0032381.1 mouse_genomes_project 7 146883373 146886154 + MGP_WSBEiJ_P0086328 Brsk2 protein_coding protein_coding MGP_WSBEiJ_T0010743.1 MGP_WSBEiJ_G0008900.1 mouse_genomes_project 7 132452013 132452080 - Mir3103 miRNA miRNA MGP_WSBEiJ_T0096848.1 MGP_WSBEiJ_G0035529.1 mouse_genomes_project 7 116370094 116371521 + pseudogene pseudogene MGP_WSBEiJ_T0084175.1 MGP_WSBEiJ_G0031829.1 mouse_genomes_project 7 106796336 106797296 + MGP_WSBEiJ_P0084175 Olfr631 protein_coding protein_coding MGP_WSBEiJ_T0082381.1 MGP_WSBEiJ_G0031348.1 mouse_genomes_project 7 45351502 45360994 - MGP_WSBEiJ_P0082381 Prrg2 protein_coding protein_coding MGP_WSBEiJ_T0084833.1 MGP_WSBEiJ_G0032060.1 mouse_genomes_project 7 123621844 123642920 + MGP_WSBEiJ_P0084833 Lyrm1 protein_coding protein_coding MGP_WSBEiJ_T0084834.1 MGP_WSBEiJ_G0032060.1 mouse_genomes_project 7 123621850 123642451 + MGP_WSBEiJ_P0084834 Lyrm1 protein_coding protein_coding MGP_WSBEiJ_T0084835.1 MGP_WSBEiJ_G0032060.1 mouse_genomes_project 7 123622276 123642916 + MGP_WSBEiJ_P0084835 Lyrm1 protein_coding protein_coding MGP_WSBEiJ_T0084836.1 MGP_WSBEiJ_G0032060.1 mouse_genomes_project 7 123626096 123642922 + MGP_WSBEiJ_P0084836 Lyrm1 protein_coding protein_coding MGP_WSBEiJ_T0084279.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440773 108468045 - MGP_WSBEiJ_P0084279 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084280.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440774 108453732 - MGP_WSBEiJ_P0084280 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084281.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440774 108454252 - MGP_WSBEiJ_P0084281 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084282.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440774 108454468 - MGP_WSBEiJ_P0084282 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084283.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440774 108467670 - MGP_WSBEiJ_P0084283 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084284.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440776 108460990 - MGP_WSBEiJ_P0084284 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084285.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440777 108453911 - Apbb1 protein_coding retained_intron MGP_WSBEiJ_T0084286.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440793 108467883 - MGP_WSBEiJ_P0084286 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084287.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108440813 108454247 - MGP_WSBEiJ_P0084287 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084288.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108441108 108453732 - MGP_WSBEiJ_P0084288 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084289.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108441451 108450459 - Apbb1 protein_coding retained_intron MGP_WSBEiJ_T0084290.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108441758 108452249 - Apbb1 protein_coding retained_intron MGP_WSBEiJ_T0084291.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108450543 108467584 - MGP_WSBEiJ_P0084291 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084292.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108451060 108453918 - MGP_WSBEiJ_P0084292 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084293.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108451503 108454220 - MGP_WSBEiJ_P0084293 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084294.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108451618 108454228 - MGP_WSBEiJ_P0084294 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084295.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108452048 108454547 - MGP_WSBEiJ_P0084295 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0084296.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108452122 108453625 - Apbb1 protein_coding retained_intron MGP_WSBEiJ_T0084297.1 MGP_WSBEiJ_G0031897.1 mouse_genomes_project 7 108460555 108467580 - MGP_WSBEiJ_P0084297 Apbb1 protein_coding protein_coding MGP_WSBEiJ_T0085761.1 MGP_WSBEiJ_G0032235.1 mouse_genomes_project 7 135438205 135457032 - MGP_WSBEiJ_P0085761 4933402N03Rik protein_coding protein_coding MGP_WSBEiJ_T0080374.1 MGP_WSBEiJ_G0030827.1 mouse_genomes_project 7 10759732 10783354 + MGP_WSBEiJ_P0080374 Bsph1 protein_coding protein_coding MGP_WSBEiJ_T0080375.1 MGP_WSBEiJ_G0030827.1 mouse_genomes_project 7 10759747 10783284 + MGP_WSBEiJ_P0080375 Bsph1 protein_coding protein_coding MGP_WSBEiJ_T0015275.1 MGP_WSBEiJ_G0013405.1 mouse_genomes_project 7 35668140 35669115 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082262.1 MGP_WSBEiJ_G0031318.1 mouse_genomes_project 7 44739397 44764388 - MGP_WSBEiJ_P0082262 Mybpc2 protein_coding protein_coding MGP_WSBEiJ_T0082263.1 MGP_WSBEiJ_G0031318.1 mouse_genomes_project 7 44739530 44769702 - MGP_WSBEiJ_P0082263 Mybpc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084096.1 MGP_WSBEiJ_G0031754.1 mouse_genomes_project 7 105264214 105272240 - MGP_WSBEiJ_P0084096 protein_coding protein_coding MGP_WSBEiJ_T0082060.1 MGP_WSBEiJ_G0031256.1 mouse_genomes_project 7 41141310 41168737 - MGP_WSBEiJ_P0082060 Vmn2r63 protein_coding protein_coding MGP_WSBEiJ_T0002155.1 MGP_WSBEiJ_G0002074.1 mouse_genomes_project 7 16743922 16745164 + TEC TEC MGP_WSBEiJ_T0099706.1 MGP_WSBEiJ_G0038369.1 mouse_genomes_project 7 44472672 44472762 + Snord88c snoRNA snoRNA MGP_WSBEiJ_T0081855.1 MGP_WSBEiJ_G0031217.1 mouse_genomes_project 7 33258777 33260798 - MGP_WSBEiJ_P0081855 Scgb2b26 protein_coding protein_coding MGP_WSBEiJ_T0097093.1 MGP_WSBEiJ_G0035774.1 mouse_genomes_project 7 18009833 18009952 - n-R5s152 rRNA rRNA MGP_WSBEiJ_T0080307.1 MGP_WSBEiJ_G0030810.1 mouse_genomes_project 7 10202184 10205842 + MGP_WSBEiJ_P0080307 Rnf225 protein_coding protein_coding MGP_WSBEiJ_T0083411.1 MGP_WSBEiJ_G0031576.1 mouse_genomes_project 7 82865456 82996618 + MGP_WSBEiJ_P0083411 Pde8a protein_coding protein_coding MGP_WSBEiJ_T0083412.1 MGP_WSBEiJ_G0031576.1 mouse_genomes_project 7 82957914 82977382 + Pde8a protein_coding processed_transcript MGP_WSBEiJ_T0083413.1 MGP_WSBEiJ_G0031576.1 mouse_genomes_project 7 82968896 82981524 + Pde8a protein_coding processed_transcript MGP_WSBEiJ_T0084431.1 MGP_WSBEiJ_G0031964.1 mouse_genomes_project 7 111821933 111822866 + MGP_WSBEiJ_P0084431 Olfr508 protein_coding protein_coding MGP_WSBEiJ_T0083609.1 MGP_WSBEiJ_G0031651.1 mouse_genomes_project 7 92703289 92707001 + MGP_WSBEiJ_P0083609 Crebzf protein_coding protein_coding MGP_WSBEiJ_T0083610.1 MGP_WSBEiJ_G0031651.1 mouse_genomes_project 7 92703341 92709640 + MGP_WSBEiJ_P0083610 Crebzf protein_coding protein_coding MGP_WSBEiJ_T0083611.1 MGP_WSBEiJ_G0031651.1 mouse_genomes_project 7 92704230 92705263 + Crebzf protein_coding processed_transcript MGP_WSBEiJ_T0083612.1 MGP_WSBEiJ_G0031651.1 mouse_genomes_project 7 92704230 92704938 + MGP_WSBEiJ_P0083612 Crebzf protein_coding protein_coding MGP_WSBEiJ_T0083613.1 MGP_WSBEiJ_G0031651.1 mouse_genomes_project 7 92704402 92707913 + Crebzf protein_coding processed_transcript MGP_WSBEiJ_T0084391.1 MGP_WSBEiJ_G0031931.1 mouse_genomes_project 7 110183036 110183984 + MGP_WSBEiJ_P0084391 Olfr17 protein_coding protein_coding MGP_WSBEiJ_T0081279.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26973785 26986386 - MGP_WSBEiJ_P0081279 Plekhg2 protein_coding protein_coding MGP_WSBEiJ_T0081280.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26973786 26986730 - Plekhg2 protein_coding retained_intron MGP_WSBEiJ_T0081281.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26973786 26977467 - Plekhg2 protein_coding retained_intron MGP_WSBEiJ_T0081282.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26973786 26986647 - MGP_WSBEiJ_P0081282 Plekhg2 protein_coding protein_coding MGP_WSBEiJ_T0081283.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26973786 26985727 - MGP_WSBEiJ_P0081283 Plekhg2 protein_coding protein_coding MGP_WSBEiJ_T0081284.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26975273 26986752 - MGP_WSBEiJ_P0081284 Plekhg2 protein_coding protein_coding MGP_WSBEiJ_T0081285.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26978129 26979618 - Plekhg2 protein_coding retained_intron MGP_WSBEiJ_T0081286.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26982535 26985880 - MGP_WSBEiJ_P0081286 Plekhg2 protein_coding protein_coding MGP_WSBEiJ_T0081287.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26984233 26986233 - MGP_WSBEiJ_P0081287 Plekhg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081288.1 MGP_WSBEiJ_G0031090.1 mouse_genomes_project 7 26984568 26985661 - MGP_WSBEiJ_P0081288 Plekhg2 protein_coding protein_coding MGP_WSBEiJ_T0101065.1 MGP_WSBEiJ_G0039522.1 mouse_genomes_project 7 49299873 49300765 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005114.1 MGP_WSBEiJ_G0004352.1 mouse_genomes_project 7 30063908 30071754 + Gm10640 antisense antisense MGP_WSBEiJ_T0005115.1 MGP_WSBEiJ_G0004352.1 mouse_genomes_project 7 30070557 30079184 + Gm10640 antisense antisense MGP_WSBEiJ_T0080283.1 MGP_WSBEiJ_G0030803.1 mouse_genomes_project 7 9975977 9995976 - MGP_WSBEiJ_P0080283 protein_coding protein_coding MGP_WSBEiJ_T0017778.1 MGP_WSBEiJ_G0015095.1 mouse_genomes_project 7 64761944 64765142 + Gm27252 processed_transcript lincRNA MGP_WSBEiJ_T0017779.1 MGP_WSBEiJ_G0015095.1 mouse_genomes_project 7 64763385 64764973 + Gm27252 processed_transcript antisense MGP_WSBEiJ_T0098512.1 MGP_WSBEiJ_G0037175.1 mouse_genomes_project 7 127280727 127280830 - Gm23559 snRNA snRNA MGP_WSBEiJ_T0083567.1 MGP_WSBEiJ_G0031637.1 mouse_genomes_project 7 90629280 90691624 + MGP_WSBEiJ_P0083567 Rab38 protein_coding protein_coding MGP_WSBEiJ_T0082046.1 MGP_WSBEiJ_G0031252.1 mouse_genomes_project 7 37808730 37818164 - MGP_WSBEiJ_P0082046 Pop4 protein_coding protein_coding MGP_WSBEiJ_T0082047.1 MGP_WSBEiJ_G0031252.1 mouse_genomes_project 7 37811080 37818068 - MGP_WSBEiJ_P0082047 Pop4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082048.1 MGP_WSBEiJ_G0031252.1 mouse_genomes_project 7 37811150 37818110 - MGP_WSBEiJ_P0082048 Pop4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082049.1 MGP_WSBEiJ_G0031252.1 mouse_genomes_project 7 37812631 37818090 - Pop4 protein_coding retained_intron MGP_WSBEiJ_T0082050.1 MGP_WSBEiJ_G0031252.1 mouse_genomes_project 7 37812836 37818114 - MGP_WSBEiJ_P0082050 Pop4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082051.1 MGP_WSBEiJ_G0031252.1 mouse_genomes_project 7 37815116 37818016 - Pop4 protein_coding retained_intron MGP_WSBEiJ_T0085630.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132429223 132430284 + Slc5a2 protein_coding retained_intron MGP_WSBEiJ_T0085631.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132429242 132435813 + MGP_WSBEiJ_P0085631 Slc5a2 protein_coding protein_coding MGP_WSBEiJ_T0085632.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132429244 132435603 + MGP_WSBEiJ_P0085632 Slc5a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085633.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132429249 132432707 + MGP_WSBEiJ_P0085633 Slc5a2 protein_coding protein_coding MGP_WSBEiJ_T0085634.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132429261 132432711 + MGP_WSBEiJ_P0085634 Slc5a2 protein_coding protein_coding MGP_WSBEiJ_T0085635.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132429866 132433447 + MGP_WSBEiJ_P0085635 Slc5a2 protein_coding protein_coding MGP_WSBEiJ_T0085636.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132429909 132431045 + MGP_WSBEiJ_P0085636 Slc5a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085637.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132429936 132430341 + Slc5a2 protein_coding retained_intron MGP_WSBEiJ_T0085638.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132430524 132432560 + Slc5a2 protein_coding retained_intron MGP_WSBEiJ_T0085639.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132430957 132433370 + MGP_WSBEiJ_P0085639 Slc5a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085640.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132432520 132435570 + MGP_WSBEiJ_P0085640 Slc5a2 protein_coding protein_coding MGP_WSBEiJ_T0085641.1 MGP_WSBEiJ_G0032218.1 mouse_genomes_project 7 132433956 132435570 + MGP_WSBEiJ_P0085641 Slc5a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010718.1 MGP_WSBEiJ_G0008875.1 mouse_genomes_project 7 75067583 75067635 + Mir7234 miRNA miRNA MGP_WSBEiJ_T0017769.1 MGP_WSBEiJ_G0015092.1 mouse_genomes_project 7 56862323 56863257 + Gm15888 processed_transcript processed_transcript MGP_WSBEiJ_T0098503.1 MGP_WSBEiJ_G0037166.1 mouse_genomes_project 7 113044708 113044815 - Gm22822 snRNA snRNA MGP_WSBEiJ_T0082605.1 MGP_WSBEiJ_G0031407.1 mouse_genomes_project 7 46297816 46300661 - MGP_WSBEiJ_P0082605 Emp3 protein_coding protein_coding MGP_WSBEiJ_T0082606.1 MGP_WSBEiJ_G0031407.1 mouse_genomes_project 7 46297816 46301238 - MGP_WSBEiJ_P0082606 Emp3 protein_coding protein_coding MGP_WSBEiJ_T0015338.1 MGP_WSBEiJ_G0013468.1 mouse_genomes_project 7 76689537 76689741 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010755.1 MGP_WSBEiJ_G0008912.1 mouse_genomes_project 7 147626450 147626523 - Mir483 miRNA miRNA MGP_WSBEiJ_T0082101.1 MGP_WSBEiJ_G0031269.1 mouse_genomes_project 7 43573670 43586889 + MGP_WSBEiJ_P0082101 Siglecg protein_coding protein_coding MGP_WSBEiJ_T0082102.1 MGP_WSBEiJ_G0031269.1 mouse_genomes_project 7 43573705 43586889 + Siglecg protein_coding retained_intron MGP_WSBEiJ_T0082103.1 MGP_WSBEiJ_G0031269.1 mouse_genomes_project 7 43573734 43586889 + Siglecg protein_coding retained_intron MGP_WSBEiJ_T0082104.1 MGP_WSBEiJ_G0031269.1 mouse_genomes_project 7 43573939 43579603 + Siglecg protein_coding retained_intron MGP_WSBEiJ_T0017803.1 MGP_WSBEiJ_G0015103.1 mouse_genomes_project 7 100671025 100674858 + processed_transcript processed_transcript MGP_WSBEiJ_T0017804.1 MGP_WSBEiJ_G0015103.1 mouse_genomes_project 7 100671072 100674858 + processed_transcript processed_transcript MGP_WSBEiJ_T0085497.1 MGP_WSBEiJ_G0032189.1 mouse_genomes_project 7 131838228 131848615 - MGP_WSBEiJ_P0085497 Ctf2 protein_coding protein_coding MGP_WSBEiJ_T0082565.1 MGP_WSBEiJ_G0031398.1 mouse_genomes_project 7 46095785 46127878 - MGP_WSBEiJ_P0082565 Sult2b1 protein_coding protein_coding MGP_WSBEiJ_T0082566.1 MGP_WSBEiJ_G0031398.1 mouse_genomes_project 7 46095802 46109540 - MGP_WSBEiJ_P0082566 Sult2b1 protein_coding protein_coding MGP_WSBEiJ_T0082567.1 MGP_WSBEiJ_G0031398.1 mouse_genomes_project 7 46102463 46109540 - MGP_WSBEiJ_P0082567 Sult2b1 protein_coding protein_coding MGP_WSBEiJ_T0082568.1 MGP_WSBEiJ_G0031398.1 mouse_genomes_project 7 46102497 46109803 - Sult2b1 protein_coding processed_transcript MGP_WSBEiJ_T0082569.1 MGP_WSBEiJ_G0031398.1 mouse_genomes_project 7 46126739 46127796 - Sult2b1 protein_coding processed_transcript MGP_WSBEiJ_T0081503.1 MGP_WSBEiJ_G0031142.1 mouse_genomes_project 7 28777477 28824204 + MGP_WSBEiJ_P0081503 Zfp568 protein_coding protein_coding MGP_WSBEiJ_T0081504.1 MGP_WSBEiJ_G0031142.1 mouse_genomes_project 7 28778809 28827375 + MGP_WSBEiJ_P0081504 Zfp568 protein_coding protein_coding MGP_WSBEiJ_T0081505.1 MGP_WSBEiJ_G0031142.1 mouse_genomes_project 7 28781283 28822740 + MGP_WSBEiJ_P0081505 Zfp568 protein_coding protein_coding MGP_WSBEiJ_T0081506.1 MGP_WSBEiJ_G0031142.1 mouse_genomes_project 7 28781283 28822740 + MGP_WSBEiJ_P0081506 Zfp568 protein_coding protein_coding MGP_WSBEiJ_T0005215.1 MGP_WSBEiJ_G0004422.1 mouse_genomes_project 7 131710370 131715857 - Gm44759 antisense antisense MGP_WSBEiJ_T0084606.1 MGP_WSBEiJ_G0032013.1 mouse_genomes_project 7 116755166 116810012 - MGP_WSBEiJ_P0084606 Btbd10 protein_coding protein_coding MGP_WSBEiJ_T0084607.1 MGP_WSBEiJ_G0032013.1 mouse_genomes_project 7 116755177 116787598 - MGP_WSBEiJ_P0084607 Btbd10 protein_coding protein_coding MGP_WSBEiJ_T0084608.1 MGP_WSBEiJ_G0032013.1 mouse_genomes_project 7 116755186 116792341 - MGP_WSBEiJ_P0084608 Btbd10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084609.1 MGP_WSBEiJ_G0032013.1 mouse_genomes_project 7 116767137 116771685 - Btbd10 protein_coding retained_intron MGP_WSBEiJ_T0084610.1 MGP_WSBEiJ_G0032013.1 mouse_genomes_project 7 116809289 116810009 - Btbd10 protein_coding processed_transcript MGP_WSBEiJ_T0085170.1 MGP_WSBEiJ_G0032130.1 mouse_genomes_project 7 130709236 130712691 - MGP_WSBEiJ_P0085170 Sult1a1 protein_coding protein_coding MGP_WSBEiJ_T0085171.1 MGP_WSBEiJ_G0032130.1 mouse_genomes_project 7 130709242 130712730 - MGP_WSBEiJ_P0085171 Sult1a1 protein_coding protein_coding MGP_WSBEiJ_T0085172.1 MGP_WSBEiJ_G0032130.1 mouse_genomes_project 7 130709243 130712730 - MGP_WSBEiJ_P0085172 Sult1a1 protein_coding protein_coding MGP_WSBEiJ_T0085173.1 MGP_WSBEiJ_G0032130.1 mouse_genomes_project 7 130710640 130712748 - MGP_WSBEiJ_P0085173 Sult1a1 protein_coding protein_coding MGP_WSBEiJ_T0081671.1 MGP_WSBEiJ_G0031177.1 mouse_genomes_project 7 29400102 29402623 + MGP_WSBEiJ_P0081671 Igflr1 protein_coding protein_coding MGP_WSBEiJ_T0081672.1 MGP_WSBEiJ_G0031177.1 mouse_genomes_project 7 29400755 29402620 + MGP_WSBEiJ_P0081672 Igflr1 protein_coding protein_coding MGP_WSBEiJ_T0005213.1 MGP_WSBEiJ_G0004420.1 mouse_genomes_project 7 131627781 131630212 - 1700008J07Rik antisense antisense MGP_WSBEiJ_T0081920.1 MGP_WSBEiJ_G0031229.1 mouse_genomes_project 7 34245573 34384917 + MGP_WSBEiJ_P0081920 Pepd protein_coding protein_coding MGP_WSBEiJ_T0081921.1 MGP_WSBEiJ_G0031229.1 mouse_genomes_project 7 34281914 34359344 + MGP_WSBEiJ_P0081921 Pepd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081922.1 MGP_WSBEiJ_G0031229.1 mouse_genomes_project 7 34305563 34380943 + Pepd protein_coding retained_intron MGP_WSBEiJ_T0081923.1 MGP_WSBEiJ_G0031229.1 mouse_genomes_project 7 34305790 34317076 + Pepd protein_coding retained_intron MGP_WSBEiJ_T0081924.1 MGP_WSBEiJ_G0031229.1 mouse_genomes_project 7 34380690 34384916 + Pepd protein_coding retained_intron MGP_WSBEiJ_T0081925.1 MGP_WSBEiJ_G0031229.1 mouse_genomes_project 7 34383398 34384743 + Pepd protein_coding retained_intron MGP_WSBEiJ_T0010750.1 MGP_WSBEiJ_G0008907.1 mouse_genomes_project 7 144679784 144679850 - Mir7062 miRNA miRNA MGP_WSBEiJ_T0017767.1 MGP_WSBEiJ_G0015091.1 mouse_genomes_project 7 56843100 56854604 + A230056P14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017768.1 MGP_WSBEiJ_G0015091.1 mouse_genomes_project 7 56843100 56863275 + A230056P14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0101102.1 MGP_WSBEiJ_G0039559.1 mouse_genomes_project 7 106012390 106013317 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080066.1 MGP_WSBEiJ_G0030710.1 mouse_genomes_project 7 1432279 1433741 - Tnni3 protein_coding retained_intron MGP_WSBEiJ_T0080067.1 MGP_WSBEiJ_G0030710.1 mouse_genomes_project 7 1432279 1438348 - MGP_WSBEiJ_P0080067 Tnni3 protein_coding protein_coding MGP_WSBEiJ_T0080068.1 MGP_WSBEiJ_G0030710.1 mouse_genomes_project 7 1432282 1434349 - Tnni3 protein_coding retained_intron MGP_WSBEiJ_T0080069.1 MGP_WSBEiJ_G0030710.1 mouse_genomes_project 7 1434219 1438614 - MGP_WSBEiJ_P0080069 Tnni3 protein_coding protein_coding MGP_WSBEiJ_T0080070.1 MGP_WSBEiJ_G0030710.1 mouse_genomes_project 7 1434258 1440049 - MGP_WSBEiJ_P0080070 Tnni3 protein_coding protein_coding MGP_WSBEiJ_T0080071.1 MGP_WSBEiJ_G0030710.1 mouse_genomes_project 7 1434823 1438262 - Tnni3 protein_coding retained_intron MGP_WSBEiJ_T0080072.1 MGP_WSBEiJ_G0030710.1 mouse_genomes_project 7 1437160 1438312 - Tnni3 protein_coding retained_intron MGP_WSBEiJ_T0085222.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130832148 130838731 - MGP_WSBEiJ_P0085222 Ppp4c protein_coding protein_coding MGP_WSBEiJ_T0085223.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130832150 130838575 - MGP_WSBEiJ_P0085223 Ppp4c protein_coding protein_coding MGP_WSBEiJ_T0085224.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130832442 130834694 - MGP_WSBEiJ_P0085224 Ppp4c protein_coding protein_coding MGP_WSBEiJ_T0085225.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130832512 130833623 - MGP_WSBEiJ_P0085225 Ppp4c protein_coding protein_coding MGP_WSBEiJ_T0085226.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130832572 130838728 - MGP_WSBEiJ_P0085226 Ppp4c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085227.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130833503 130835328 - MGP_WSBEiJ_P0085227 Ppp4c protein_coding protein_coding MGP_WSBEiJ_T0085228.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130833751 130838382 - MGP_WSBEiJ_P0085228 Ppp4c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085229.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130833854 130835301 - Ppp4c protein_coding retained_intron MGP_WSBEiJ_T0085230.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130833947 130838701 - Ppp4c protein_coding retained_intron MGP_WSBEiJ_T0085231.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130836796 130838731 - Ppp4c protein_coding retained_intron MGP_WSBEiJ_T0085232.1 MGP_WSBEiJ_G0032138.1 mouse_genomes_project 7 130836820 130838717 - Ppp4c protein_coding retained_intron MGP_WSBEiJ_T0081335.1 MGP_WSBEiJ_G0031106.1 mouse_genomes_project 7 27446335 27449142 + MGP_WSBEiJ_P0081335 Ccer2 protein_coding protein_coding MGP_WSBEiJ_T0082107.1 MGP_WSBEiJ_G0031272.1 mouse_genomes_project 7 43598560 43604467 + MGP_WSBEiJ_P0082107 Lim2 protein_coding protein_coding MGP_WSBEiJ_T0086487.1 MGP_WSBEiJ_G0032411.1 mouse_genomes_project 7 148648481 148663769 - MGP_WSBEiJ_P0086487 protein_coding protein_coding MGP_WSBEiJ_T0086489.1 MGP_WSBEiJ_G0032411.1 mouse_genomes_project 7 148650573 148663754 - MGP_WSBEiJ_P0086489 protein_coding protein_coding MGP_WSBEiJ_T0080270.1 MGP_WSBEiJ_G0030796.1 mouse_genomes_project 7 9575323 9576241 + MGP_WSBEiJ_P0080270 Vmn1r82 protein_coding protein_coding MGP_WSBEiJ_T0080271.1 MGP_WSBEiJ_G0030796.1 mouse_genomes_project 7 9575326 9576241 + MGP_WSBEiJ_P0080271 Vmn1r82 protein_coding protein_coding MGP_WSBEiJ_T0097458.1 MGP_WSBEiJ_G0036128.1 mouse_genomes_project 7 79998056 80013389 - Gm44606 sense_intronic sense_intronic MGP_WSBEiJ_T0084113.1 MGP_WSBEiJ_G0031770.1 mouse_genomes_project 7 105528261 105547921 - MGP_WSBEiJ_P0084113 Olfr78 protein_coding protein_coding MGP_WSBEiJ_T0084114.1 MGP_WSBEiJ_G0031770.1 mouse_genomes_project 7 105528261 105547921 - MGP_WSBEiJ_P0084114 Olfr78 protein_coding protein_coding MGP_WSBEiJ_T0081071.1 MGP_WSBEiJ_G0031029.1 mouse_genomes_project 7 24254891 24290805 + MGP_WSBEiJ_P0081071 Cyp2b10 protein_coding protein_coding MGP_WSBEiJ_T0081072.1 MGP_WSBEiJ_G0031029.1 mouse_genomes_project 7 24254947 24290740 + MGP_WSBEiJ_P0081072 Cyp2b10 protein_coding protein_coding MGP_WSBEiJ_T0081073.1 MGP_WSBEiJ_G0031029.1 mouse_genomes_project 7 24279739 24280404 + Cyp2b10 protein_coding retained_intron MGP_WSBEiJ_T0080897.1 MGP_WSBEiJ_G0030993.1 mouse_genomes_project 7 23089621 23095223 - MGP_WSBEiJ_P0080897 Lypd4 protein_coding protein_coding MGP_WSBEiJ_T0080898.1 MGP_WSBEiJ_G0030993.1 mouse_genomes_project 7 23090326 23095014 - MGP_WSBEiJ_P0080898 Lypd4 protein_coding protein_coding MGP_WSBEiJ_T0008817.1 MGP_WSBEiJ_G0007116.1 mouse_genomes_project 7 94998192 95005690 + Gm26944 lincRNA lincRNA MGP_WSBEiJ_T0083161.1 MGP_WSBEiJ_G0031533.1 mouse_genomes_project 7 80518796 80580851 + MGP_WSBEiJ_P0083161 Acan protein_coding protein_coding MGP_WSBEiJ_T0083162.1 MGP_WSBEiJ_G0031533.1 mouse_genomes_project 7 80565510 80580379 + MGP_WSBEiJ_P0083162 Acan protein_coding protein_coding MGP_WSBEiJ_T0084853.1 MGP_WSBEiJ_G0032068.1 mouse_genomes_project 7 124159655 124235253 + MGP_WSBEiJ_P0084853 Abca16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084854.1 MGP_WSBEiJ_G0032068.1 mouse_genomes_project 7 124172663 124296361 + MGP_WSBEiJ_P0084854 Abca16 protein_coding protein_coding MGP_WSBEiJ_T0084855.1 MGP_WSBEiJ_G0032068.1 mouse_genomes_project 7 124172663 124296361 + MGP_WSBEiJ_P0084855 Abca16 protein_coding protein_coding MGP_WSBEiJ_T0084856.1 MGP_WSBEiJ_G0032068.1 mouse_genomes_project 7 124230975 124249699 + Abca16 protein_coding retained_intron MGP_WSBEiJ_T0084097.1 MGP_WSBEiJ_G0031755.1 mouse_genomes_project 7 105279036 105279976 - MGP_WSBEiJ_P0084097 Olfr545 protein_coding protein_coding MGP_WSBEiJ_T0080682.1 MGP_WSBEiJ_G0030921.1 mouse_genomes_project 7 17333994 17344618 - MGP_WSBEiJ_P0080682 Klc3 protein_coding protein_coding MGP_WSBEiJ_T0080683.1 MGP_WSBEiJ_G0030921.1 mouse_genomes_project 7 17333997 17340416 - MGP_WSBEiJ_P0080683 Klc3 protein_coding protein_coding MGP_WSBEiJ_T0080684.1 MGP_WSBEiJ_G0030921.1 mouse_genomes_project 7 17333997 17340373 - MGP_WSBEiJ_P0080684 Klc3 protein_coding protein_coding MGP_WSBEiJ_T0080685.1 MGP_WSBEiJ_G0030921.1 mouse_genomes_project 7 17334058 17335540 - Klc3 protein_coding retained_intron MGP_WSBEiJ_T0080686.1 MGP_WSBEiJ_G0030921.1 mouse_genomes_project 7 17334121 17340045 - MGP_WSBEiJ_P0080686 Klc3 protein_coding protein_coding MGP_WSBEiJ_T0080687.1 MGP_WSBEiJ_G0030921.1 mouse_genomes_project 7 17334911 17336134 - Klc3 protein_coding retained_intron MGP_WSBEiJ_T0080695.1 MGP_WSBEiJ_G0030927.1 mouse_genomes_project 7 17456908 17465763 + MGP_WSBEiJ_P0080695 Trappc6a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080696.1 MGP_WSBEiJ_G0030927.1 mouse_genomes_project 7 17456948 17465770 + MGP_WSBEiJ_P0080696 Trappc6a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080697.1 MGP_WSBEiJ_G0030927.1 mouse_genomes_project 7 17456950 17465770 + MGP_WSBEiJ_P0080697 Trappc6a protein_coding protein_coding MGP_WSBEiJ_T0080698.1 MGP_WSBEiJ_G0030927.1 mouse_genomes_project 7 17456964 17465766 + MGP_WSBEiJ_P0080698 Trappc6a protein_coding protein_coding MGP_WSBEiJ_T0080699.1 MGP_WSBEiJ_G0030927.1 mouse_genomes_project 7 17456968 17464943 + Trappc6a protein_coding retained_intron MGP_WSBEiJ_T0080700.1 MGP_WSBEiJ_G0030927.1 mouse_genomes_project 7 17464045 17465761 + MGP_WSBEiJ_P0080700 Trappc6a protein_coding protein_coding MGP_WSBEiJ_T0081194.1 MGP_WSBEiJ_G0031064.1 mouse_genomes_project 7 26055999 26063906 + MGP_WSBEiJ_P0081194 Hipk4 protein_coding protein_coding MGP_WSBEiJ_T0081195.1 MGP_WSBEiJ_G0031064.1 mouse_genomes_project 7 26059789 26063901 + MGP_WSBEiJ_P0081195 Hipk4 protein_coding protein_coding MGP_WSBEiJ_T0099715.1 MGP_WSBEiJ_G0038378.1 mouse_genomes_project 7 58903315 58903449 + Gm23911 snoRNA snoRNA MGP_WSBEiJ_T0101098.1 MGP_WSBEiJ_G0039555.1 mouse_genomes_project 7 105728678 105729563 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0086270.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146316356 146321970 + MGP_WSBEiJ_P0086270 Cracr2b protein_coding protein_coding MGP_WSBEiJ_T0086271.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146317157 146320338 + MGP_WSBEiJ_P0086271 Cracr2b protein_coding protein_coding MGP_WSBEiJ_T0086272.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146317222 146318771 + MGP_WSBEiJ_P0086272 Cracr2b protein_coding protein_coding MGP_WSBEiJ_T0086273.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146318419 146320038 + MGP_WSBEiJ_P0086273 Cracr2b protein_coding protein_coding MGP_WSBEiJ_T0086274.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146318719 146321429 + MGP_WSBEiJ_P0086274 Cracr2b protein_coding protein_coding MGP_WSBEiJ_T0086275.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146319352 146320141 + Cracr2b protein_coding retained_intron MGP_WSBEiJ_T0086276.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146320402 146321034 + Cracr2b protein_coding retained_intron MGP_WSBEiJ_T0086277.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146320536 146321715 + Cracr2b protein_coding retained_intron MGP_WSBEiJ_T0086278.1 MGP_WSBEiJ_G0032371.1 mouse_genomes_project 7 146321030 146321970 + MGP_WSBEiJ_P0086278 Cracr2b protein_coding protein_coding MGP_WSBEiJ_T0098492.1 MGP_WSBEiJ_G0037155.1 mouse_genomes_project 7 85966963 85967121 + Gm22177 snRNA snRNA MGP_WSBEiJ_T0010753.1 MGP_WSBEiJ_G0008910.1 mouse_genomes_project 7 146876891 146876954 + Mir3104 miRNA miRNA MGP_WSBEiJ_T0082769.1 MGP_WSBEiJ_G0031458.1 mouse_genomes_project 7 52692465 52831322 + MGP_WSBEiJ_P0082769 Gas2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082770.1 MGP_WSBEiJ_G0031458.1 mouse_genomes_project 7 52692830 52833464 + MGP_WSBEiJ_P0082770 Gas2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082771.1 MGP_WSBEiJ_G0031458.1 mouse_genomes_project 7 52692877 52802342 + MGP_WSBEiJ_P0082771 Gas2 protein_coding protein_coding MGP_WSBEiJ_T0082772.1 MGP_WSBEiJ_G0031458.1 mouse_genomes_project 7 52694354 52694848 + Gas2 protein_coding retained_intron MGP_WSBEiJ_T0082773.1 MGP_WSBEiJ_G0031458.1 mouse_genomes_project 7 52712178 52779700 + MGP_WSBEiJ_P0082773 Gas2 protein_coding protein_coding MGP_WSBEiJ_T0082774.1 MGP_WSBEiJ_G0031458.1 mouse_genomes_project 7 52760087 52779738 + Gas2 protein_coding processed_transcript MGP_WSBEiJ_T0082775.1 MGP_WSBEiJ_G0031458.1 mouse_genomes_project 7 52779654 52792790 + Gas2 protein_coding processed_transcript MGP_WSBEiJ_T0084389.1 MGP_WSBEiJ_G0031929.1 mouse_genomes_project 7 110121624 110122599 + MGP_WSBEiJ_P0084389 Olfr713 protein_coding protein_coding MGP_WSBEiJ_T0015225.1 MGP_WSBEiJ_G0013355.1 mouse_genomes_project 7 10943971 10947404 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015253.1 MGP_WSBEiJ_G0013383.1 mouse_genomes_project 7 23737418 23738730 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083466.1 MGP_WSBEiJ_G0031591.1 mouse_genomes_project 7 84045286 84049616 + Adamtsl3 protein_coding processed_transcript MGP_WSBEiJ_T0083467.1 MGP_WSBEiJ_G0031591.1 mouse_genomes_project 7 84045324 84347712 + MGP_WSBEiJ_P0083467 Adamtsl3 protein_coding protein_coding MGP_WSBEiJ_T0083468.1 MGP_WSBEiJ_G0031591.1 mouse_genomes_project 7 84046809 84345685 + MGP_WSBEiJ_P0083468 Adamtsl3 protein_coding protein_coding MGP_WSBEiJ_T0083469.1 MGP_WSBEiJ_G0031591.1 mouse_genomes_project 7 84128477 84189319 + Adamtsl3 protein_coding retained_intron MGP_WSBEiJ_T0083470.1 MGP_WSBEiJ_G0031591.1 mouse_genomes_project 7 84345031 84346038 + MGP_WSBEiJ_P0083470 Adamtsl3 protein_coding protein_coding MGP_WSBEiJ_T0080308.1 MGP_WSBEiJ_G0030811.1 mouse_genomes_project 7 10244391 10252339 + MGP_WSBEiJ_P0080308 Zfp324 protein_coding protein_coding MGP_WSBEiJ_T0080309.1 MGP_WSBEiJ_G0030811.1 mouse_genomes_project 7 10244398 10252753 + MGP_WSBEiJ_P0080309 Zfp324 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080310.1 MGP_WSBEiJ_G0030811.1 mouse_genomes_project 7 10244420 10252316 + MGP_WSBEiJ_P0080310 Zfp324 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100956.1 MGP_WSBEiJ_G0039413.1 mouse_genomes_project 7 152154 152998 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080949.1 MGP_WSBEiJ_G0031001.1 mouse_genomes_project 7 23317528 23321978 + Zfp574 protein_coding processed_transcript MGP_WSBEiJ_T0080950.1 MGP_WSBEiJ_G0031001.1 mouse_genomes_project 7 23317607 23322337 + Zfp574 protein_coding processed_transcript MGP_WSBEiJ_T0080951.1 MGP_WSBEiJ_G0031001.1 mouse_genomes_project 7 23322166 23328453 + MGP_WSBEiJ_P0080951 Zfp574 protein_coding protein_coding MGP_WSBEiJ_T0080952.1 MGP_WSBEiJ_G0031001.1 mouse_genomes_project 7 23322245 23327441 + MGP_WSBEiJ_P0080952 Zfp574 protein_coding protein_coding MGP_WSBEiJ_T0081932.1 MGP_WSBEiJ_G0031232.1 mouse_genomes_project 7 34531605 34546357 + MGP_WSBEiJ_P0081932 Slc7a10 protein_coding protein_coding MGP_WSBEiJ_T0081933.1 MGP_WSBEiJ_G0031232.1 mouse_genomes_project 7 34531605 34540689 + MGP_WSBEiJ_P0081933 Slc7a10 protein_coding protein_coding MGP_WSBEiJ_T0081934.1 MGP_WSBEiJ_G0031232.1 mouse_genomes_project 7 34531641 34546150 + MGP_WSBEiJ_P0081934 Slc7a10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081935.1 MGP_WSBEiJ_G0031232.1 mouse_genomes_project 7 34531702 34543187 + MGP_WSBEiJ_P0081935 Slc7a10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081936.1 MGP_WSBEiJ_G0031232.1 mouse_genomes_project 7 34544150 34546131 + MGP_WSBEiJ_P0081936 Slc7a10 protein_coding protein_coding MGP_WSBEiJ_T0080018.1 MGP_WSBEiJ_G0030704.1 mouse_genomes_project 7 1236739 1250753 + MGP_WSBEiJ_P0080018 Ncr1 protein_coding protein_coding MGP_WSBEiJ_T0080019.1 MGP_WSBEiJ_G0030704.1 mouse_genomes_project 7 1236784 1250753 + MGP_WSBEiJ_P0080019 Ncr1 protein_coding protein_coding MGP_WSBEiJ_T0084138.1 MGP_WSBEiJ_G0031792.1 mouse_genomes_project 7 105992936 105993872 + MGP_WSBEiJ_P0084138 Olfr594 protein_coding protein_coding MGP_WSBEiJ_T0080773.1 MGP_WSBEiJ_G0030948.1 mouse_genomes_project 7 17927523 17943408 - MGP_WSBEiJ_P0080773 Igsf23 protein_coding protein_coding MGP_WSBEiJ_T0002261.1 MGP_WSBEiJ_G0002179.1 mouse_genomes_project 7 130045991 130047533 - TEC TEC MGP_WSBEiJ_T0097459.1 MGP_WSBEiJ_G0036129.1 mouse_genomes_project 7 91544001 91577124 - sense_intronic sense_intronic MGP_WSBEiJ_T0005091.1 MGP_WSBEiJ_G0004334.1 mouse_genomes_project 7 23662494 23734814 + antisense antisense MGP_WSBEiJ_T0005092.1 MGP_WSBEiJ_G0004334.1 mouse_genomes_project 7 23662498 23673305 + antisense antisense MGP_WSBEiJ_T0005093.1 MGP_WSBEiJ_G0004334.1 mouse_genomes_project 7 23672375 23673144 + antisense antisense MGP_WSBEiJ_T0005094.1 MGP_WSBEiJ_G0004334.1 mouse_genomes_project 7 23683020 23884661 + antisense antisense MGP_WSBEiJ_T0005234.1 MGP_WSBEiJ_G0004436.1 mouse_genomes_project 7 147984286 147986093 - Tspan32os antisense antisense MGP_WSBEiJ_T0005235.1 MGP_WSBEiJ_G0004436.1 mouse_genomes_project 7 147984286 148004381 - Tspan32os antisense antisense MGP_WSBEiJ_T0010704.1 MGP_WSBEiJ_G0008861.1 mouse_genomes_project 7 62521259 62521319 - Mir344h-1 miRNA miRNA MGP_WSBEiJ_T0086498.1 MGP_WSBEiJ_G0032415.1 mouse_genomes_project 7 148806566 148813192 - MGP_WSBEiJ_P0086498 Mrgpre protein_coding protein_coding MGP_WSBEiJ_T0086042.1 MGP_WSBEiJ_G0032313.1 mouse_genomes_project 7 145048470 145049406 - MGP_WSBEiJ_P0086042 Olfr60 protein_coding protein_coding MGP_WSBEiJ_T0083342.1 MGP_WSBEiJ_G0031565.1 mouse_genomes_project 7 81969902 81978903 - Furin protein_coding retained_intron MGP_WSBEiJ_T0083343.1 MGP_WSBEiJ_G0031565.1 mouse_genomes_project 7 81970513 81985301 - MGP_WSBEiJ_P0083343 Furin protein_coding protein_coding MGP_WSBEiJ_T0083344.1 MGP_WSBEiJ_G0031565.1 mouse_genomes_project 7 81970513 81987767 - MGP_WSBEiJ_P0083344 Furin protein_coding protein_coding MGP_WSBEiJ_T0083345.1 MGP_WSBEiJ_G0031565.1 mouse_genomes_project 7 81970516 81984246 - MGP_WSBEiJ_P0083345 Furin protein_coding protein_coding MGP_WSBEiJ_T0083346.1 MGP_WSBEiJ_G0031565.1 mouse_genomes_project 7 81978554 81985116 - MGP_WSBEiJ_P0083346 Furin protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083347.1 MGP_WSBEiJ_G0031565.1 mouse_genomes_project 7 81978864 81981982 - Furin protein_coding retained_intron MGP_WSBEiJ_T0083348.1 MGP_WSBEiJ_G0031565.1 mouse_genomes_project 7 81981106 81987772 - MGP_WSBEiJ_P0083348 Furin protein_coding protein_coding MGP_WSBEiJ_T0083349.1 MGP_WSBEiJ_G0031565.1 mouse_genomes_project 7 81981153 81985658 - MGP_WSBEiJ_P0083349 Furin protein_coding protein_coding MGP_WSBEiJ_T0010696.1 MGP_WSBEiJ_G0008853.1 mouse_genomes_project 7 62459646 62459726 - Gm23962 miRNA miRNA MGP_WSBEiJ_T0017737.1 MGP_WSBEiJ_G0015079.1 mouse_genomes_project 7 25954064 25955298 + Gm44924 processed_transcript processed_transcript MGP_WSBEiJ_T0005057.1 MGP_WSBEiJ_G0004313.1 mouse_genomes_project 7 541244 545243 + Gm15929 antisense antisense MGP_WSBEiJ_T0008677.1 MGP_WSBEiJ_G0007016.1 mouse_genomes_project 7 27793757 27803295 + Gm26604 lincRNA lincRNA MGP_WSBEiJ_T0015402.1 MGP_WSBEiJ_G0013532.1 mouse_genomes_project 7 129197799 129198237 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085905.1 MGP_WSBEiJ_G0032272.1 mouse_genomes_project 7 139993937 140012279 - MGP_WSBEiJ_P0085905 Clrn3 protein_coding protein_coding MGP_WSBEiJ_T0101087.1 MGP_WSBEiJ_G0039544.1 mouse_genomes_project 7 88150058 88160691 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008708.1 MGP_WSBEiJ_G0007043.1 mouse_genomes_project 7 39408651 39409196 - lincRNA lincRNA MGP_WSBEiJ_T0011499.1 MGP_WSBEiJ_G0009656.1 mouse_genomes_project 7 147529249 147529320 + Gm27483 misc_RNA misc_RNA MGP_WSBEiJ_T0081592.1 MGP_WSBEiJ_G0031163.1 mouse_genomes_project 7 29177370 29184621 - MGP_WSBEiJ_P0081592 Lrfn3 protein_coding protein_coding MGP_WSBEiJ_T0015384.1 MGP_WSBEiJ_G0013514.1 mouse_genomes_project 7 107336009 107337139 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008697.1 MGP_WSBEiJ_G0007035.1 mouse_genomes_project 7 36606433 36615033 - Gm28078 lincRNA lincRNA MGP_WSBEiJ_T0005209.1 MGP_WSBEiJ_G0004417.1 mouse_genomes_project 7 129546461 129547803 - Gm44876 antisense antisense MGP_WSBEiJ_T0084926.1 MGP_WSBEiJ_G0032089.1 mouse_genomes_project 7 125921760 125924998 - Ndufab1 protein_coding retained_intron MGP_WSBEiJ_T0084927.1 MGP_WSBEiJ_G0032089.1 mouse_genomes_project 7 125923256 125936556 - MGP_WSBEiJ_P0084927 Ndufab1 protein_coding protein_coding MGP_WSBEiJ_T0084928.1 MGP_WSBEiJ_G0032089.1 mouse_genomes_project 7 125924028 125926303 - Ndufab1 protein_coding retained_intron MGP_WSBEiJ_T0084929.1 MGP_WSBEiJ_G0032089.1 mouse_genomes_project 7 125924043 125926993 - Ndufab1 protein_coding retained_intron MGP_WSBEiJ_T0084930.1 MGP_WSBEiJ_G0032089.1 mouse_genomes_project 7 125924736 125936424 - MGP_WSBEiJ_P0084930 Ndufab1 protein_coding protein_coding MGP_WSBEiJ_T0084931.1 MGP_WSBEiJ_G0032089.1 mouse_genomes_project 7 125926335 125936395 - Ndufab1 protein_coding retained_intron MGP_WSBEiJ_T0084932.1 MGP_WSBEiJ_G0032089.1 mouse_genomes_project 7 125927242 125934410 - Ndufab1 protein_coding processed_transcript MGP_WSBEiJ_T0084933.1 MGP_WSBEiJ_G0032089.1 mouse_genomes_project 7 125929672 125936517 - Ndufab1 protein_coding retained_intron MGP_WSBEiJ_T0005557.1 MGP_WSBEiJ_G0004675.1 mouse_genomes_project 7 80750536 80751660 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0005558.1 MGP_WSBEiJ_G0004675.1 mouse_genomes_project 7 80750540 80751884 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0100971.1 MGP_WSBEiJ_G0039428.1 mouse_genomes_project 7 9240396 9241236 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0086287.1 MGP_WSBEiJ_G0032374.1 mouse_genomes_project 7 146349597 146397575 - MGP_WSBEiJ_P0086287 Chid1 protein_coding protein_coding MGP_WSBEiJ_T0086288.1 MGP_WSBEiJ_G0032374.1 mouse_genomes_project 7 146351860 146397537 - Chid1 protein_coding retained_intron MGP_WSBEiJ_T0086289.1 MGP_WSBEiJ_G0032374.1 mouse_genomes_project 7 146352507 146390588 - MGP_WSBEiJ_P0086289 Chid1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086290.1 MGP_WSBEiJ_G0032374.1 mouse_genomes_project 7 146352507 146397608 - MGP_WSBEiJ_P0086290 Chid1 protein_coding protein_coding MGP_WSBEiJ_T0086291.1 MGP_WSBEiJ_G0032374.1 mouse_genomes_project 7 146369099 146384144 - Chid1 protein_coding processed_transcript MGP_WSBEiJ_T0086292.1 MGP_WSBEiJ_G0032374.1 mouse_genomes_project 7 146373049 146397248 - MGP_WSBEiJ_P0086292 Chid1 protein_coding protein_coding MGP_WSBEiJ_T0086293.1 MGP_WSBEiJ_G0032374.1 mouse_genomes_project 7 146389560 146397550 - Chid1 protein_coding retained_intron MGP_WSBEiJ_T0084191.1 MGP_WSBEiJ_G0031845.1 mouse_genomes_project 7 107024850 107034018 - MGP_WSBEiJ_P0084191 Olfm5 protein_coding protein_coding MGP_WSBEiJ_T0084192.1 MGP_WSBEiJ_G0031845.1 mouse_genomes_project 7 107025954 107033999 - MGP_WSBEiJ_P0084192 Olfm5 protein_coding protein_coding MGP_WSBEiJ_T0082958.1 MGP_WSBEiJ_G0031496.1 mouse_genomes_project 7 66769220 66868306 + MGP_WSBEiJ_P0082958 Pcsk6 protein_coding protein_coding MGP_WSBEiJ_T0082959.1 MGP_WSBEiJ_G0031496.1 mouse_genomes_project 7 66769515 66972984 + MGP_WSBEiJ_P0082959 Pcsk6 protein_coding protein_coding MGP_WSBEiJ_T0082960.1 MGP_WSBEiJ_G0031496.1 mouse_genomes_project 7 66769622 66972932 + MGP_WSBEiJ_P0082960 Pcsk6 protein_coding protein_coding MGP_WSBEiJ_T0082961.1 MGP_WSBEiJ_G0031496.1 mouse_genomes_project 7 66769918 66972938 + MGP_WSBEiJ_P0082961 Pcsk6 protein_coding protein_coding MGP_WSBEiJ_T0082962.1 MGP_WSBEiJ_G0031496.1 mouse_genomes_project 7 66868333 66878530 + Pcsk6 protein_coding retained_intron MGP_WSBEiJ_T0082963.1 MGP_WSBEiJ_G0031496.1 mouse_genomes_project 7 66959608 66966135 + Pcsk6 protein_coding retained_intron MGP_WSBEiJ_T0080294.1 MGP_WSBEiJ_G0030807.1 mouse_genomes_project 7 10154900 10166166 + Zfp128 protein_coding retained_intron MGP_WSBEiJ_T0080295.1 MGP_WSBEiJ_G0030807.1 mouse_genomes_project 7 10154900 10167706 + MGP_WSBEiJ_P0080295 Zfp128 protein_coding protein_coding MGP_WSBEiJ_T0005192.1 MGP_WSBEiJ_G0004406.1 mouse_genomes_project 7 116960043 116986945 - Far1os antisense antisense MGP_WSBEiJ_T0005193.1 MGP_WSBEiJ_G0004406.1 mouse_genomes_project 7 116968581 116995576 - Far1os antisense antisense MGP_WSBEiJ_T0081081.1 MGP_WSBEiJ_G0031033.1 mouse_genomes_project 7 24863899 24909237 + MGP_WSBEiJ_P0081081 Nlrp4a protein_coding protein_coding MGP_WSBEiJ_T0081082.1 MGP_WSBEiJ_G0031033.1 mouse_genomes_project 7 24864400 24908311 + MGP_WSBEiJ_P0081082 Nlrp4a protein_coding protein_coding MGP_WSBEiJ_T0081083.1 MGP_WSBEiJ_G0031033.1 mouse_genomes_project 7 24864432 24882597 + Nlrp4a protein_coding processed_transcript MGP_WSBEiJ_T0081084.1 MGP_WSBEiJ_G0031033.1 mouse_genomes_project 7 24864432 24897861 + MGP_WSBEiJ_P0081084 Nlrp4a protein_coding protein_coding MGP_WSBEiJ_T0083744.1 MGP_WSBEiJ_G0031679.1 mouse_genomes_project 7 100630678 100632822 - MGP_WSBEiJ_P0083744 Omp protein_coding protein_coding MGP_WSBEiJ_T0015201.1 MGP_WSBEiJ_G0013331.1 mouse_genomes_project 7 436764 437065 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083681.1 MGP_WSBEiJ_G0031668.1 mouse_genomes_project 7 99876560 99881354 - MGP_WSBEiJ_P0083681 Thrsp protein_coding protein_coding MGP_WSBEiJ_T0083682.1 MGP_WSBEiJ_G0031668.1 mouse_genomes_project 7 99879772 99881143 - Thrsp protein_coding retained_intron MGP_WSBEiJ_T0083245.1 MGP_WSBEiJ_G0031550.1 mouse_genomes_project 7 81432801 81444366 - MGP_WSBEiJ_P0083245 Arpin protein_coding protein_coding MGP_WSBEiJ_T0008899.1 MGP_WSBEiJ_G0007169.1 mouse_genomes_project 7 135041457 135043461 - Etos1 lincRNA lincRNA MGP_WSBEiJ_T0080371.1 MGP_WSBEiJ_G0030826.1 mouse_genomes_project 7 10718420 10729169 + MGP_WSBEiJ_P0080371 Cabp5 protein_coding protein_coding MGP_WSBEiJ_T0080372.1 MGP_WSBEiJ_G0030826.1 mouse_genomes_project 7 10718583 10726597 + MGP_WSBEiJ_P0080372 Cabp5 protein_coding protein_coding MGP_WSBEiJ_T0080373.1 MGP_WSBEiJ_G0030826.1 mouse_genomes_project 7 10718596 10725848 + MGP_WSBEiJ_P0080373 Cabp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081191.1 MGP_WSBEiJ_G0031063.1 mouse_genomes_project 7 26034442 26052597 + MGP_WSBEiJ_P0081191 Prx protein_coding protein_coding MGP_WSBEiJ_T0081192.1 MGP_WSBEiJ_G0031063.1 mouse_genomes_project 7 26037258 26052797 + MGP_WSBEiJ_P0081192 Prx protein_coding protein_coding MGP_WSBEiJ_T0081193.1 MGP_WSBEiJ_G0031063.1 mouse_genomes_project 7 26037263 26052804 + MGP_WSBEiJ_P0081193 Prx protein_coding protein_coding MGP_WSBEiJ_T0085593.1 MGP_WSBEiJ_G0032207.1 mouse_genomes_project 7 132126842 132131003 - MGP_WSBEiJ_P0085593 Pycard protein_coding protein_coding MGP_WSBEiJ_T0085594.1 MGP_WSBEiJ_G0032207.1 mouse_genomes_project 7 132128774 132130663 - MGP_WSBEiJ_P0085594 Pycard protein_coding protein_coding MGP_WSBEiJ_T0011505.1 MGP_WSBEiJ_G0009662.1 mouse_genomes_project 7 148451581 148451642 + Gm27901 misc_RNA misc_RNA MGP_WSBEiJ_T0015323.1 MGP_WSBEiJ_G0013453.1 mouse_genomes_project 7 64692137 64692398 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008724.1 MGP_WSBEiJ_G0007053.1 mouse_genomes_project 7 44458511 44465524 + Gm36864 lincRNA lincRNA MGP_WSBEiJ_T0097096.1 MGP_WSBEiJ_G0035777.1 mouse_genomes_project 7 67308444 67308534 - Gm23957 rRNA rRNA MGP_WSBEiJ_T0082776.1 MGP_WSBEiJ_G0031459.1 mouse_genomes_project 7 52833511 52842246 - MGP_WSBEiJ_P0082776 Svip protein_coding protein_coding MGP_WSBEiJ_T0083983.1 MGP_WSBEiJ_G0031732.1 mouse_genomes_project 7 104563572 104579102 - MGP_WSBEiJ_P0083983 Inppl1 protein_coding protein_coding MGP_WSBEiJ_T0083984.1 MGP_WSBEiJ_G0031732.1 mouse_genomes_project 7 104563579 104578798 - MGP_WSBEiJ_P0083984 Inppl1 protein_coding protein_coding MGP_WSBEiJ_T0083985.1 MGP_WSBEiJ_G0031732.1 mouse_genomes_project 7 104563593 104570201 - Inppl1 protein_coding processed_transcript MGP_WSBEiJ_T0083986.1 MGP_WSBEiJ_G0031732.1 mouse_genomes_project 7 104564881 104578779 - MGP_WSBEiJ_P0083986 Inppl1 protein_coding protein_coding MGP_WSBEiJ_T0084947.1 MGP_WSBEiJ_G0032092.1 mouse_genomes_project 7 125998338 126010955 + MGP_WSBEiJ_P0084947 Plk1 protein_coding protein_coding MGP_WSBEiJ_T0084948.1 MGP_WSBEiJ_G0032092.1 mouse_genomes_project 7 125998406 126004106 + MGP_WSBEiJ_P0084948 Plk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084949.1 MGP_WSBEiJ_G0032092.1 mouse_genomes_project 7 125998480 126000526 + MGP_WSBEiJ_P0084949 Plk1 protein_coding protein_coding MGP_WSBEiJ_T0086185.1 MGP_WSBEiJ_G0032360.1 mouse_genomes_project 7 146132317 146136904 + MGP_WSBEiJ_P0086185 Drd4 protein_coding protein_coding MGP_WSBEiJ_T0082386.1 MGP_WSBEiJ_G0031352.1 mouse_genomes_project 7 45431256 45433258 - MGP_WSBEiJ_P0082386 Rps11 protein_coding protein_coding MGP_WSBEiJ_T0015372.1 MGP_WSBEiJ_G0013502.1 mouse_genomes_project 7 100970213 100970530 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084035.1 MGP_WSBEiJ_G0031740.1 mouse_genomes_project 7 104771775 104774852 - MGP_WSBEiJ_P0084035 Il18bp protein_coding protein_coding MGP_WSBEiJ_T0002151.1 MGP_WSBEiJ_G0002070.1 mouse_genomes_project 7 1580610 1581905 + TEC TEC MGP_WSBEiJ_T0079903.1 MGP_WSBEiJ_G0030686.1 mouse_genomes_project 7 400033 415001 - MGP_WSBEiJ_P0079903 Tarm1 protein_coding protein_coding MGP_WSBEiJ_T0079904.1 MGP_WSBEiJ_G0030686.1 mouse_genomes_project 7 402076 415067 - MGP_WSBEiJ_P0079904 Tarm1 protein_coding protein_coding MGP_WSBEiJ_T0079905.1 MGP_WSBEiJ_G0030686.1 mouse_genomes_project 7 402577 414961 - MGP_WSBEiJ_P0079905 Tarm1 protein_coding protein_coding MGP_WSBEiJ_T0080690.1 MGP_WSBEiJ_G0030924.1 mouse_genomes_project 7 17367882 17401639 - MGP_WSBEiJ_P0080690 Mark4 protein_coding protein_coding MGP_WSBEiJ_T0080691.1 MGP_WSBEiJ_G0030924.1 mouse_genomes_project 7 17368154 17401978 - MGP_WSBEiJ_P0080691 Mark4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082178.1 MGP_WSBEiJ_G0031297.1 mouse_genomes_project 7 44076473 44081119 + MGP_WSBEiJ_P0082178 Klk4 protein_coding protein_coding MGP_WSBEiJ_T0080722.1 MGP_WSBEiJ_G0030935.1 mouse_genomes_project 7 17629797 17635551 - MGP_WSBEiJ_P0080722 Gm44805 protein_coding protein_coding MGP_WSBEiJ_T0080723.1 MGP_WSBEiJ_G0030935.1 mouse_genomes_project 7 17629802 17632578 - MGP_WSBEiJ_P0080723 Gm44805 protein_coding protein_coding MGP_WSBEiJ_T0080724.1 MGP_WSBEiJ_G0030935.1 mouse_genomes_project 7 17629802 17640051 - MGP_WSBEiJ_P0080724 Gm44805 protein_coding protein_coding MGP_WSBEiJ_T0080725.1 MGP_WSBEiJ_G0030935.1 mouse_genomes_project 7 17629802 17636628 - MGP_WSBEiJ_P0080725 Gm44805 protein_coding protein_coding MGP_WSBEiJ_T0080726.1 MGP_WSBEiJ_G0030935.1 mouse_genomes_project 7 17631886 17640064 - MGP_WSBEiJ_P0080726 Gm44805 protein_coding protein_coding MGP_WSBEiJ_T0015340.1 MGP_WSBEiJ_G0013470.1 mouse_genomes_project 7 77117666 77118018 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083445.1 MGP_WSBEiJ_G0031586.1 mouse_genomes_project 7 83553134 83553464 - MGP_WSBEiJ_P0083445 Gm10160 protein_coding protein_coding MGP_WSBEiJ_T0084374.1 MGP_WSBEiJ_G0031915.1 mouse_genomes_project 7 109860814 109861765 - MGP_WSBEiJ_P0084374 Olfr699 protein_coding protein_coding MGP_WSBEiJ_T0100152.1 MGP_WSBEiJ_G0038733.1 mouse_genomes_project 7 132482993 132511647 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100153.1 MGP_WSBEiJ_G0038733.1 mouse_genomes_project 7 132511308 132511503 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0098464.1 MGP_WSBEiJ_G0037127.1 mouse_genomes_project 7 13820300 13824268 - Gm26473 snRNA snRNA MGP_WSBEiJ_T0005219.1 MGP_WSBEiJ_G0004425.1 mouse_genomes_project 7 132337902 132339616 - Gm45108 antisense antisense MGP_WSBEiJ_T0086050.1 MGP_WSBEiJ_G0032321.1 mouse_genomes_project 7 145267781 145268714 + MGP_WSBEiJ_P0086050 protein_coding protein_coding MGP_WSBEiJ_T0085552.1 MGP_WSBEiJ_G0032201.1 mouse_genomes_project 7 132022159 132024714 - MGP_WSBEiJ_P0085552 Vkorc1 protein_coding protein_coding MGP_WSBEiJ_T0085553.1 MGP_WSBEiJ_G0032201.1 mouse_genomes_project 7 132022161 132024348 - MGP_WSBEiJ_P0085553 Vkorc1 protein_coding protein_coding MGP_WSBEiJ_T0085554.1 MGP_WSBEiJ_G0032201.1 mouse_genomes_project 7 132022334 132024406 - MGP_WSBEiJ_P0085554 Vkorc1 protein_coding protein_coding MGP_WSBEiJ_T0085178.1 MGP_WSBEiJ_G0032132.1 mouse_genomes_project 7 130733565 130734852 + Bola2 protein_coding retained_intron MGP_WSBEiJ_T0085179.1 MGP_WSBEiJ_G0032132.1 mouse_genomes_project 7 130733600 130735223 + MGP_WSBEiJ_P0085179 Bola2 protein_coding protein_coding MGP_WSBEiJ_T0085180.1 MGP_WSBEiJ_G0032132.1 mouse_genomes_project 7 130734130 130734858 + Bola2 protein_coding processed_transcript MGP_WSBEiJ_T0085181.1 MGP_WSBEiJ_G0032132.1 mouse_genomes_project 7 130734137 130734862 + MGP_WSBEiJ_P0085181 Bola2 protein_coding protein_coding MGP_WSBEiJ_T0085182.1 MGP_WSBEiJ_G0032132.1 mouse_genomes_project 7 130734167 130744443 + Bola2 protein_coding retained_intron MGP_WSBEiJ_T0081291.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27008257 27014716 + MGP_WSBEiJ_P0081291 Paf1 protein_coding protein_coding MGP_WSBEiJ_T0081292.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27008268 27009348 + Paf1 protein_coding retained_intron MGP_WSBEiJ_T0081293.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27008347 27014711 + Paf1 protein_coding retained_intron MGP_WSBEiJ_T0081294.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27008467 27011078 + Paf1 protein_coding retained_intron MGP_WSBEiJ_T0081295.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27008764 27010996 + Paf1 protein_coding retained_intron MGP_WSBEiJ_T0081296.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27010063 27011100 + Paf1 protein_coding retained_intron MGP_WSBEiJ_T0081297.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27010725 27011380 + Paf1 protein_coding retained_intron MGP_WSBEiJ_T0081298.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27011125 27014071 + Paf1 protein_coding retained_intron MGP_WSBEiJ_T0081299.1 MGP_WSBEiJ_G0031093.1 mouse_genomes_project 7 27013761 27014388 + Paf1 protein_coding processed_transcript MGP_WSBEiJ_T0084759.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122429468 122534869 + MGP_WSBEiJ_P0084759 9030624J02Rik protein_coding protein_coding MGP_WSBEiJ_T0084760.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122429962 122471477 + 9030624J02Rik protein_coding processed_transcript MGP_WSBEiJ_T0084761.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122429977 122533392 + MGP_WSBEiJ_P0084761 9030624J02Rik protein_coding protein_coding MGP_WSBEiJ_T0084762.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122429977 122533382 + MGP_WSBEiJ_P0084762 9030624J02Rik protein_coding protein_coding MGP_WSBEiJ_T0084763.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122429977 122449415 + MGP_WSBEiJ_P0084763 9030624J02Rik protein_coding protein_coding MGP_WSBEiJ_T0084764.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122429979 122435609 + 9030624J02Rik protein_coding retained_intron MGP_WSBEiJ_T0084765.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122435840 122453706 + 9030624J02Rik protein_coding retained_intron MGP_WSBEiJ_T0084766.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122440057 122441614 + 9030624J02Rik protein_coding retained_intron MGP_WSBEiJ_T0084767.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122451382 122533390 + MGP_WSBEiJ_P0084767 9030624J02Rik protein_coding protein_coding MGP_WSBEiJ_T0084768.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122484721 122518120 + MGP_WSBEiJ_P0084768 9030624J02Rik protein_coding protein_coding MGP_WSBEiJ_T0084769.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122493815 122525910 + 9030624J02Rik protein_coding retained_intron MGP_WSBEiJ_T0084770.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122497316 122503943 + 9030624J02Rik protein_coding retained_intron MGP_WSBEiJ_T0084771.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122512012 122518344 + 9030624J02Rik protein_coding retained_intron MGP_WSBEiJ_T0084772.1 MGP_WSBEiJ_G0032043.1 mouse_genomes_project 7 122516499 122533202 + 9030624J02Rik protein_coding processed_transcript MGP_WSBEiJ_T0084219.1 MGP_WSBEiJ_G0031854.1 mouse_genomes_project 7 107165669 107182415 - protein_coding retained_intron MGP_WSBEiJ_T0084220.1 MGP_WSBEiJ_G0031854.1 mouse_genomes_project 7 107165685 107168896 - MGP_WSBEiJ_P0084220 protein_coding protein_coding MGP_WSBEiJ_T0084221.1 MGP_WSBEiJ_G0031854.1 mouse_genomes_project 7 107167137 107177724 - MGP_WSBEiJ_P0084221 protein_coding protein_coding MGP_WSBEiJ_T0084222.1 MGP_WSBEiJ_G0031854.1 mouse_genomes_project 7 107167843 107168893 - protein_coding retained_intron MGP_WSBEiJ_T0084223.1 MGP_WSBEiJ_G0031854.1 mouse_genomes_project 7 107172352 107182312 - MGP_WSBEiJ_P0084223 protein_coding protein_coding MGP_WSBEiJ_T0008681.1 MGP_WSBEiJ_G0007020.1 mouse_genomes_project 7 29757150 29759487 + Gm29440 lincRNA lincRNA MGP_WSBEiJ_T0082127.1 MGP_WSBEiJ_G0031278.1 mouse_genomes_project 7 43641306 43660052 - MGP_WSBEiJ_P0082127 Iglon5 protein_coding protein_coding MGP_WSBEiJ_T0082128.1 MGP_WSBEiJ_G0031278.1 mouse_genomes_project 7 43642573 43646621 - MGP_WSBEiJ_P0082128 Iglon5 protein_coding protein_coding MGP_WSBEiJ_T0085922.1 MGP_WSBEiJ_G0032280.1 mouse_genomes_project 7 143451533 143462905 - MGP_WSBEiJ_P0085922 Mapk1ip1 protein_coding protein_coding MGP_WSBEiJ_T0085923.1 MGP_WSBEiJ_G0032280.1 mouse_genomes_project 7 143451543 143462892 - MGP_WSBEiJ_P0085923 Mapk1ip1 protein_coding protein_coding MGP_WSBEiJ_T0085924.1 MGP_WSBEiJ_G0032280.1 mouse_genomes_project 7 143451588 143462889 - MGP_WSBEiJ_P0085924 Mapk1ip1 protein_coding protein_coding MGP_WSBEiJ_T0098495.1 MGP_WSBEiJ_G0037158.1 mouse_genomes_project 7 93689614 93689720 - Gm22080 snRNA snRNA MGP_WSBEiJ_T0082636.1 MGP_WSBEiJ_G0031417.1 mouse_genomes_project 7 46861887 47068489 - MGP_WSBEiJ_P0082636 Sergef protein_coding protein_coding MGP_WSBEiJ_T0082637.1 MGP_WSBEiJ_G0031417.1 mouse_genomes_project 7 46861940 47029859 - Sergef protein_coding processed_transcript MGP_WSBEiJ_T0082638.1 MGP_WSBEiJ_G0031417.1 mouse_genomes_project 7 46862193 47041425 - Sergef protein_coding processed_transcript MGP_WSBEiJ_T0082639.1 MGP_WSBEiJ_G0031417.1 mouse_genomes_project 7 47061341 47064629 - Sergef protein_coding retained_intron MGP_WSBEiJ_T0082640.1 MGP_WSBEiJ_G0031417.1 mouse_genomes_project 7 47061363 47068313 - MGP_WSBEiJ_P0082640 Sergef protein_coding protein_coding MGP_WSBEiJ_T0082641.1 MGP_WSBEiJ_G0031417.1 mouse_genomes_project 7 47061377 47068262 - Sergef protein_coding processed_transcript MGP_WSBEiJ_T0005223.1 MGP_WSBEiJ_G0004429.1 mouse_genomes_project 7 136505300 136506431 + Gm15677 antisense antisense MGP_WSBEiJ_T0080641.1 MGP_WSBEiJ_G0030912.1 mouse_genomes_project 7 17152274 17172897 + MGP_WSBEiJ_P0080641 Opa3 protein_coding protein_coding MGP_WSBEiJ_T0080642.1 MGP_WSBEiJ_G0030912.1 mouse_genomes_project 7 17152323 17153053 + Opa3 protein_coding retained_intron MGP_WSBEiJ_T0080643.1 MGP_WSBEiJ_G0030912.1 mouse_genomes_project 7 17152323 17181607 + MGP_WSBEiJ_P0080643 Opa3 protein_coding protein_coding MGP_WSBEiJ_T0083834.1 MGP_WSBEiJ_G0031705.1 mouse_genomes_project 7 102632387 102661758 + MGP_WSBEiJ_P0083834 Chrdl2 protein_coding protein_coding MGP_WSBEiJ_T0083835.1 MGP_WSBEiJ_G0031705.1 mouse_genomes_project 7 102635897 102661760 + MGP_WSBEiJ_P0083835 Chrdl2 protein_coding protein_coding MGP_WSBEiJ_T0083836.1 MGP_WSBEiJ_G0031705.1 mouse_genomes_project 7 102648100 102661758 + MGP_WSBEiJ_P0083836 Chrdl2 protein_coding protein_coding MGP_WSBEiJ_T0081442.1 MGP_WSBEiJ_G0031128.1 mouse_genomes_project 7 28001580 28034993 - MGP_WSBEiJ_P0081442 Spint2 protein_coding protein_coding MGP_WSBEiJ_T0081443.1 MGP_WSBEiJ_G0031128.1 mouse_genomes_project 7 28001580 28034993 - MGP_WSBEiJ_P0081443 Spint2 protein_coding protein_coding MGP_WSBEiJ_T0081623.1 MGP_WSBEiJ_G0031173.1 mouse_genomes_project 7 29384500 29387767 + Hspb6 protein_coding processed_transcript MGP_WSBEiJ_T0081624.1 MGP_WSBEiJ_G0031173.1 mouse_genomes_project 7 29384846 29387766 + Hspb6 protein_coding processed_transcript MGP_WSBEiJ_T0081625.1 MGP_WSBEiJ_G0031173.1 mouse_genomes_project 7 29385590 29387770 + MGP_WSBEiJ_P0081625 Hspb6 protein_coding protein_coding MGP_WSBEiJ_T0081626.1 MGP_WSBEiJ_G0031173.1 mouse_genomes_project 7 29386211 29386971 + Hspb6 protein_coding processed_transcript MGP_WSBEiJ_T0082129.1 MGP_WSBEiJ_G0031279.1 mouse_genomes_project 7 43663227 43677166 - MGP_WSBEiJ_P0082129 4931406B18Rik protein_coding protein_coding MGP_WSBEiJ_T0082130.1 MGP_WSBEiJ_G0031279.1 mouse_genomes_project 7 43665013 43676862 - MGP_WSBEiJ_P0082130 4931406B18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082131.1 MGP_WSBEiJ_G0031279.1 mouse_genomes_project 7 43665759 43677156 - MGP_WSBEiJ_P0082131 4931406B18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082132.1 MGP_WSBEiJ_G0031279.1 mouse_genomes_project 7 43667821 43675349 - MGP_WSBEiJ_P0082132 4931406B18Rik protein_coding protein_coding MGP_WSBEiJ_T0082133.1 MGP_WSBEiJ_G0031279.1 mouse_genomes_project 7 43668911 43677162 - 4931406B18Rik protein_coding retained_intron MGP_WSBEiJ_T0082134.1 MGP_WSBEiJ_G0031279.1 mouse_genomes_project 7 43669557 43677168 - MGP_WSBEiJ_P0082134 4931406B18Rik protein_coding protein_coding MGP_WSBEiJ_T0082135.1 MGP_WSBEiJ_G0031279.1 mouse_genomes_project 7 43672389 43676923 - MGP_WSBEiJ_P0082135 4931406B18Rik protein_coding protein_coding MGP_WSBEiJ_T0017815.1 MGP_WSBEiJ_G0015110.1 mouse_genomes_project 7 130814381 130823059 - Gm9967 processed_transcript antisense MGP_WSBEiJ_T0017816.1 MGP_WSBEiJ_G0015110.1 mouse_genomes_project 7 130819952 130823047 - Gm9967 processed_transcript antisense MGP_WSBEiJ_T0017817.1 MGP_WSBEiJ_G0015110.1 mouse_genomes_project 7 130821227 130823099 - Gm9967 processed_transcript retained_intron MGP_WSBEiJ_T0081237.1 MGP_WSBEiJ_G0031075.1 mouse_genomes_project 7 26550807 26571305 - MGP_WSBEiJ_P0081237 Zfp780b protein_coding protein_coding MGP_WSBEiJ_T0084187.1 MGP_WSBEiJ_G0031841.1 mouse_genomes_project 7 106978057 106978996 + MGP_WSBEiJ_P0084187 Olfr646 protein_coding protein_coding MGP_WSBEiJ_T0081330.1 MGP_WSBEiJ_G0031104.1 mouse_genomes_project 7 27424012 27424463 - Mrps12 protein_coding processed_transcript MGP_WSBEiJ_T0081331.1 MGP_WSBEiJ_G0031104.1 mouse_genomes_project 7 27424012 27428731 - MGP_WSBEiJ_P0081331 Mrps12 protein_coding protein_coding MGP_WSBEiJ_T0081332.1 MGP_WSBEiJ_G0031104.1 mouse_genomes_project 7 27424013 27428781 - MGP_WSBEiJ_P0081332 Mrps12 protein_coding protein_coding MGP_WSBEiJ_T0081333.1 MGP_WSBEiJ_G0031104.1 mouse_genomes_project 7 27424287 27427759 - MGP_WSBEiJ_P0081333 Mrps12 protein_coding protein_coding MGP_WSBEiJ_T0005076.1 MGP_WSBEiJ_G0004323.1 mouse_genomes_project 7 16893941 16901884 - Mypopos antisense antisense MGP_WSBEiJ_T0005077.1 MGP_WSBEiJ_G0004323.1 mouse_genomes_project 7 16894260 16901911 - Mypopos antisense antisense MGP_WSBEiJ_T0005078.1 MGP_WSBEiJ_G0004323.1 mouse_genomes_project 7 16895453 16897773 - Mypopos antisense antisense MGP_WSBEiJ_T0005079.1 MGP_WSBEiJ_G0004323.1 mouse_genomes_project 7 16898013 16901895 - Mypopos antisense antisense MGP_WSBEiJ_T0084612.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116942816 117002132 + MGP_WSBEiJ_P0084612 Far1 protein_coding protein_coding MGP_WSBEiJ_T0084613.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116942843 116981101 + Far1 protein_coding retained_intron MGP_WSBEiJ_T0084614.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116942843 116978138 + MGP_WSBEiJ_P0084614 Far1 protein_coding protein_coding MGP_WSBEiJ_T0084615.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116942843 117002132 + MGP_WSBEiJ_P0084615 Far1 protein_coding protein_coding MGP_WSBEiJ_T0084616.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116942844 117001080 + MGP_WSBEiJ_P0084616 Far1 protein_coding protein_coding MGP_WSBEiJ_T0084617.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116942859 116980636 + MGP_WSBEiJ_P0084617 Far1 protein_coding protein_coding MGP_WSBEiJ_T0084618.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116942863 116955713 + Far1 protein_coding retained_intron MGP_WSBEiJ_T0084619.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116943080 116969946 + MGP_WSBEiJ_P0084619 Far1 protein_coding protein_coding MGP_WSBEiJ_T0084620.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116978015 116983739 + Far1 protein_coding retained_intron MGP_WSBEiJ_T0084621.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116991503 116998772 + Far1 protein_coding retained_intron MGP_WSBEiJ_T0084622.1 MGP_WSBEiJ_G0032015.1 mouse_genomes_project 7 116996688 116998827 + Far1 protein_coding retained_intron MGP_WSBEiJ_T0008680.1 MGP_WSBEiJ_G0007019.1 mouse_genomes_project 7 29489883 29492231 + Gm26610 lincRNA lincRNA MGP_WSBEiJ_T0082299.1 MGP_WSBEiJ_G0031328.1 mouse_genomes_project 7 44998005 45010288 - MGP_WSBEiJ_P0082299 Zfp473 protein_coding protein_coding MGP_WSBEiJ_T0082300.1 MGP_WSBEiJ_G0031328.1 mouse_genomes_project 7 44998015 45015450 - MGP_WSBEiJ_P0082300 Zfp473 protein_coding protein_coding MGP_WSBEiJ_T0082301.1 MGP_WSBEiJ_G0031328.1 mouse_genomes_project 7 44998027 45015224 - MGP_WSBEiJ_P0082301 Zfp473 protein_coding protein_coding MGP_WSBEiJ_T0082302.1 MGP_WSBEiJ_G0031328.1 mouse_genomes_project 7 44998039 45014882 - MGP_WSBEiJ_P0082302 Zfp473 protein_coding protein_coding MGP_WSBEiJ_T0082303.1 MGP_WSBEiJ_G0031328.1 mouse_genomes_project 7 44998533 45015139 - MGP_WSBEiJ_P0082303 Zfp473 protein_coding protein_coding MGP_WSBEiJ_T0082304.1 MGP_WSBEiJ_G0031328.1 mouse_genomes_project 7 45000983 45015182 - MGP_WSBEiJ_P0082304 Zfp473 protein_coding protein_coding MGP_WSBEiJ_T0082305.1 MGP_WSBEiJ_G0031328.1 mouse_genomes_project 7 45001134 45017882 - MGP_WSBEiJ_P0082305 Zfp473 protein_coding protein_coding MGP_WSBEiJ_T0080172.1 MGP_WSBEiJ_G0030743.1 mouse_genomes_project 7 2008610 2012948 + MGP_WSBEiJ_P0080172 protein_coding protein_coding MGP_WSBEiJ_T0008662.1 MGP_WSBEiJ_G0007003.1 mouse_genomes_project 7 14538730 14542273 - 9330104G04Rik lincRNA lincRNA MGP_WSBEiJ_T0008663.1 MGP_WSBEiJ_G0007003.1 mouse_genomes_project 7 14540329 14542273 - 9330104G04Rik lincRNA lincRNA MGP_WSBEiJ_T0099730.1 MGP_WSBEiJ_G0038393.1 mouse_genomes_project 7 84763776 84763908 + Gm22934 snoRNA snoRNA MGP_WSBEiJ_T0008691.1 MGP_WSBEiJ_G0007029.1 mouse_genomes_project 7 34431242 34435213 + Gm45097 lincRNA lincRNA MGP_WSBEiJ_T0081792.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955526 29959466 - MGP_WSBEiJ_P0081792 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081793.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955526 29959281 - MGP_WSBEiJ_P0081793 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081794.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955528 29957375 - Fxyd1 protein_coding retained_intron MGP_WSBEiJ_T0081795.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955528 29959539 - MGP_WSBEiJ_P0081795 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081796.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955528 29958672 - MGP_WSBEiJ_P0081796 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081797.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955529 29956965 - MGP_WSBEiJ_P0081797 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081798.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955529 29959528 - MGP_WSBEiJ_P0081798 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081799.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955530 29956042 - Fxyd1 protein_coding retained_intron MGP_WSBEiJ_T0081800.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955530 29958679 - MGP_WSBEiJ_P0081800 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081801.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955530 29958660 - MGP_WSBEiJ_P0081801 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081802.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955531 29958690 - MGP_WSBEiJ_P0081802 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081803.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955556 29959454 - MGP_WSBEiJ_P0081803 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081804.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955576 29958691 - MGP_WSBEiJ_P0081804 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081805.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955783 29959580 - MGP_WSBEiJ_P0081805 Fxyd1 protein_coding protein_coding MGP_WSBEiJ_T0081806.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29955976 29957917 - Fxyd1 protein_coding retained_intron MGP_WSBEiJ_T0081807.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29957331 29959495 - Fxyd1 protein_coding retained_intron MGP_WSBEiJ_T0081808.1 MGP_WSBEiJ_G0031205.1 mouse_genomes_project 7 29957634 29961060 - Fxyd1 protein_coding retained_intron MGP_WSBEiJ_T0080793.1 MGP_WSBEiJ_G0030963.1 mouse_genomes_project 7 22177845 22205992 + MGP_WSBEiJ_P0080793 Zfp180 protein_coding protein_coding MGP_WSBEiJ_T0080794.1 MGP_WSBEiJ_G0030963.1 mouse_genomes_project 7 22177911 22205999 + MGP_WSBEiJ_P0080794 Zfp180 protein_coding protein_coding MGP_WSBEiJ_T0080795.1 MGP_WSBEiJ_G0030963.1 mouse_genomes_project 7 22177911 22205984 + MGP_WSBEiJ_P0080795 Zfp180 protein_coding protein_coding MGP_WSBEiJ_T0080796.1 MGP_WSBEiJ_G0030963.1 mouse_genomes_project 7 22177934 22202046 + MGP_WSBEiJ_P0080796 Zfp180 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080797.1 MGP_WSBEiJ_G0030963.1 mouse_genomes_project 7 22194720 22198996 + Zfp180 protein_coding retained_intron MGP_WSBEiJ_T0015298.1 MGP_WSBEiJ_G0013428.1 mouse_genomes_project 7 43552561 43552826 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008873.1 MGP_WSBEiJ_G0007152.1 mouse_genomes_project 7 130785568 130787346 + 4930448A20Rik lincRNA lincRNA MGP_WSBEiJ_T0008759.1 MGP_WSBEiJ_G0007079.1 mouse_genomes_project 7 73087914 73114267 + 4930441H08Rik lincRNA lincRNA MGP_WSBEiJ_T0083276.1 MGP_WSBEiJ_G0031558.1 mouse_genomes_project 7 81839060 81861022 + MGP_WSBEiJ_P0083276 Vps33b protein_coding protein_coding MGP_WSBEiJ_T0083277.1 MGP_WSBEiJ_G0031558.1 mouse_genomes_project 7 81839090 81861014 + MGP_WSBEiJ_P0083277 Vps33b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083278.1 MGP_WSBEiJ_G0031558.1 mouse_genomes_project 7 81839145 81855203 + Vps33b protein_coding retained_intron MGP_WSBEiJ_T0083279.1 MGP_WSBEiJ_G0031558.1 mouse_genomes_project 7 81839151 81861012 + MGP_WSBEiJ_P0083279 Vps33b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083280.1 MGP_WSBEiJ_G0031558.1 mouse_genomes_project 7 81843752 81853528 + Vps33b protein_coding processed_transcript MGP_WSBEiJ_T0083281.1 MGP_WSBEiJ_G0031558.1 mouse_genomes_project 7 81859460 81861204 + MGP_WSBEiJ_P0083281 Vps33b protein_coding protein_coding MGP_WSBEiJ_T0083282.1 MGP_WSBEiJ_G0031558.1 mouse_genomes_project 7 81859508 81860331 + Vps33b protein_coding retained_intron MGP_WSBEiJ_T0100323.1 MGP_WSBEiJ_G0038816.1 mouse_genomes_project 7 30332934 32847847 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100324.1 MGP_WSBEiJ_G0038816.1 mouse_genomes_project 7 30333098 30334371 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0005075.1 MGP_WSBEiJ_G0004322.1 mouse_genomes_project 7 16888266 16889032 - Gm45058 antisense antisense MGP_WSBEiJ_T0080547.1 MGP_WSBEiJ_G0030880.1 mouse_genomes_project 7 14877597 14890834 + MGP_WSBEiJ_P0080547 Psg29 protein_coding protein_coding MGP_WSBEiJ_T0015205.1 MGP_WSBEiJ_G0013335.1 mouse_genomes_project 7 1106180 1107053 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005152.1 MGP_WSBEiJ_G0004379.1 mouse_genomes_project 7 80478793 80518640 - Gm26633 antisense antisense MGP_WSBEiJ_T0015240.1 MGP_WSBEiJ_G0013370.1 mouse_genomes_project 7 15798390 15799089 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008824.1 MGP_WSBEiJ_G0007121.1 mouse_genomes_project 7 96786818 96789407 - lincRNA lincRNA MGP_WSBEiJ_T0080231.1 MGP_WSBEiJ_G0030769.1 mouse_genomes_project 7 3648668 3655250 - MGP_WSBEiJ_P0080231 Olfr5 protein_coding protein_coding MGP_WSBEiJ_T0080380.1 MGP_WSBEiJ_G0030831.1 mouse_genomes_project 7 11427516 11450571 - MGP_WSBEiJ_P0080380 protein_coding protein_coding MGP_WSBEiJ_T0015377.1 MGP_WSBEiJ_G0013507.1 mouse_genomes_project 7 103939745 103940683 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081204.1 MGP_WSBEiJ_G0031066.1 mouse_genomes_project 7 26088716 26120163 + MGP_WSBEiJ_P0081204 2310022A10Rik protein_coding protein_coding MGP_WSBEiJ_T0081205.1 MGP_WSBEiJ_G0031066.1 mouse_genomes_project 7 26088750 26109557 + MGP_WSBEiJ_P0081205 2310022A10Rik protein_coding protein_coding MGP_WSBEiJ_T0081206.1 MGP_WSBEiJ_G0031066.1 mouse_genomes_project 7 26088753 26089555 + 2310022A10Rik protein_coding processed_transcript MGP_WSBEiJ_T0081207.1 MGP_WSBEiJ_G0031066.1 mouse_genomes_project 7 26088769 26120163 + MGP_WSBEiJ_P0081207 2310022A10Rik protein_coding protein_coding MGP_WSBEiJ_T0081208.1 MGP_WSBEiJ_G0031066.1 mouse_genomes_project 7 26094635 26120158 + MGP_WSBEiJ_P0081208 2310022A10Rik protein_coding protein_coding MGP_WSBEiJ_T0081209.1 MGP_WSBEiJ_G0031066.1 mouse_genomes_project 7 26094656 26108167 + 2310022A10Rik protein_coding retained_intron MGP_WSBEiJ_T0081210.1 MGP_WSBEiJ_G0031066.1 mouse_genomes_project 7 26099540 26118692 + MGP_WSBEiJ_P0081210 2310022A10Rik protein_coding protein_coding MGP_WSBEiJ_T0081211.1 MGP_WSBEiJ_G0031066.1 mouse_genomes_project 7 26109305 26118478 + 2310022A10Rik protein_coding processed_transcript MGP_WSBEiJ_T0084605.1 MGP_WSBEiJ_G0032012.1 mouse_genomes_project 7 116639492 116753843 + MGP_WSBEiJ_P0084605 Arntl protein_coding protein_coding MGP_WSBEiJ_T0080348.1 MGP_WSBEiJ_G0030822.1 mouse_genomes_project 7 10534237 10535188 + MGP_WSBEiJ_P0080348 Vmn1r89 protein_coding protein_coding MGP_WSBEiJ_T0101000.1 MGP_WSBEiJ_G0039457.1 mouse_genomes_project 7 13347295 13347588 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010647.1 MGP_WSBEiJ_G0008804.1 mouse_genomes_project 7 97686 97744 - Mir290b miRNA miRNA MGP_WSBEiJ_T0085263.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130901223 130911398 - MGP_WSBEiJ_P0085263 protein_coding protein_coding MGP_WSBEiJ_T0085264.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130901843 130911590 - MGP_WSBEiJ_P0085264 protein_coding protein_coding MGP_WSBEiJ_T0085265.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130902688 130911912 - MGP_WSBEiJ_P0085265 protein_coding protein_coding MGP_WSBEiJ_T0085266.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130902696 130912506 - protein_coding retained_intron MGP_WSBEiJ_T0085267.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130902843 130911987 - MGP_WSBEiJ_P0085267 protein_coding protein_coding MGP_WSBEiJ_T0085268.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130902945 130911859 - protein_coding processed_transcript MGP_WSBEiJ_T0085269.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130903081 130907994 - MGP_WSBEiJ_P0085269 protein_coding protein_coding MGP_WSBEiJ_T0085270.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130903158 130912490 - MGP_WSBEiJ_P0085270 protein_coding protein_coding MGP_WSBEiJ_T0085271.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130903193 130911910 - MGP_WSBEiJ_P0085271 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085272.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130906464 130911996 - protein_coding retained_intron MGP_WSBEiJ_T0085273.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130907939 130911918 - protein_coding processed_transcript MGP_WSBEiJ_T0085274.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130907962 130911971 - MGP_WSBEiJ_P0085274 protein_coding protein_coding MGP_WSBEiJ_T0085275.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130907977 130911775 - MGP_WSBEiJ_P0085275 protein_coding protein_coding MGP_WSBEiJ_T0085276.1 MGP_WSBEiJ_G0032143.1 mouse_genomes_project 7 130911366 130911975 - protein_coding processed_transcript MGP_WSBEiJ_T0082402.1 MGP_WSBEiJ_G0031357.1 mouse_genomes_project 7 45479584 45491562 + MGP_WSBEiJ_P0082402 Slc17a7 protein_coding protein_coding MGP_WSBEiJ_T0097463.1 MGP_WSBEiJ_G0036132.1 mouse_genomes_project 7 126882169 126882753 + Gm20274 sense_intronic sense_intronic MGP_WSBEiJ_T0081428.1 MGP_WSBEiJ_G0031124.1 mouse_genomes_project 7 27917068 28501763 - protein_coding processed_transcript MGP_WSBEiJ_T0081429.1 MGP_WSBEiJ_G0031124.1 mouse_genomes_project 7 27917071 27953320 - protein_coding retained_intron MGP_WSBEiJ_T0081430.1 MGP_WSBEiJ_G0031124.1 mouse_genomes_project 7 27918791 27953299 - protein_coding retained_intron MGP_WSBEiJ_T0081431.1 MGP_WSBEiJ_G0031124.1 mouse_genomes_project 7 27918926 27953352 - MGP_WSBEiJ_P0081431 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081432.1 MGP_WSBEiJ_G0031124.1 mouse_genomes_project 7 27929844 27945800 - MGP_WSBEiJ_P0081432 protein_coding protein_coding MGP_WSBEiJ_T0081433.1 MGP_WSBEiJ_G0031124.1 mouse_genomes_project 7 27941999 27953337 - protein_coding processed_transcript MGP_WSBEiJ_T0080819.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22415065 22423811 - MGP_WSBEiJ_P0080819 Zfp61 protein_coding protein_coding MGP_WSBEiJ_T0080820.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22415083 22420170 - MGP_WSBEiJ_P0080820 Zfp61 protein_coding protein_coding MGP_WSBEiJ_T0080821.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22416045 22419900 - Zfp61 protein_coding processed_transcript MGP_WSBEiJ_T0080822.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22416188 22423446 - MGP_WSBEiJ_P0080822 Zfp61 protein_coding protein_coding MGP_WSBEiJ_T0080823.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22417549 22419737 - Zfp61 protein_coding retained_intron MGP_WSBEiJ_T0080824.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22419259 22423434 - Zfp61 protein_coding processed_transcript MGP_WSBEiJ_T0080825.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22419502 22423537 - Zfp61 protein_coding retained_intron MGP_WSBEiJ_T0080826.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22421771 22425401 - Zfp61 protein_coding processed_transcript MGP_WSBEiJ_T0080827.1 MGP_WSBEiJ_G0030971.1 mouse_genomes_project 7 22422233 22423773 - Zfp61 protein_coding retained_intron MGP_WSBEiJ_T0017754.1 MGP_WSBEiJ_G0015088.1 mouse_genomes_project 7 45693124 45694910 + Mtag2 processed_transcript processed_transcript MGP_WSBEiJ_T0017755.1 MGP_WSBEiJ_G0015088.1 mouse_genomes_project 7 45694196 45694910 + Mtag2 processed_transcript pseudogene MGP_WSBEiJ_T0017793.1 MGP_WSBEiJ_G0015099.1 mouse_genomes_project 7 76632056 76641846 + 1500012K07Rik processed_transcript lincRNA MGP_WSBEiJ_T0017794.1 MGP_WSBEiJ_G0015099.1 mouse_genomes_project 7 76632062 76654310 + 1500012K07Rik processed_transcript antisense MGP_WSBEiJ_T0017795.1 MGP_WSBEiJ_G0015099.1 mouse_genomes_project 7 76632062 76652730 + 1500012K07Rik processed_transcript lincRNA MGP_WSBEiJ_T0081074.1 MGP_WSBEiJ_G0031030.1 mouse_genomes_project 7 24312739 24351757 + MGP_WSBEiJ_P0081074 Cyp2b9 protein_coding protein_coding MGP_WSBEiJ_T0084810.1 MGP_WSBEiJ_G0032057.1 mouse_genomes_project 7 123491032 123516939 - MGP_WSBEiJ_P0084810 Eri2 protein_coding protein_coding MGP_WSBEiJ_T0084811.1 MGP_WSBEiJ_G0032057.1 mouse_genomes_project 7 123494297 123516939 - MGP_WSBEiJ_P0084811 Eri2 protein_coding protein_coding MGP_WSBEiJ_T0084815.1 MGP_WSBEiJ_G0032057.1 mouse_genomes_project 7 123504896 123516947 - Eri2 protein_coding retained_intron MGP_WSBEiJ_T0084816.1 MGP_WSBEiJ_G0032057.1 mouse_genomes_project 7 123506150 123516954 - MGP_WSBEiJ_P0084816 Eri2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084817.1 MGP_WSBEiJ_G0032057.1 mouse_genomes_project 7 123506167 123516931 - MGP_WSBEiJ_P0084817 Eri2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084818.1 MGP_WSBEiJ_G0032057.1 mouse_genomes_project 7 123507219 123517030 - MGP_WSBEiJ_P0084818 Eri2 protein_coding protein_coding MGP_WSBEiJ_T0084819.1 MGP_WSBEiJ_G0032057.1 mouse_genomes_project 7 123508817 123510276 - Eri2 protein_coding retained_intron MGP_WSBEiJ_T0082686.1 MGP_WSBEiJ_G0031427.1 mouse_genomes_project 7 47321116 47339251 + MGP_WSBEiJ_P0082686 Ldhc protein_coding protein_coding MGP_WSBEiJ_T0082687.1 MGP_WSBEiJ_G0031427.1 mouse_genomes_project 7 47321235 47336892 + MGP_WSBEiJ_P0082687 Ldhc protein_coding protein_coding MGP_WSBEiJ_T0082688.1 MGP_WSBEiJ_G0031427.1 mouse_genomes_project 7 47321319 47337580 + MGP_WSBEiJ_P0082688 Ldhc protein_coding protein_coding MGP_WSBEiJ_T0083541.1 MGP_WSBEiJ_G0031626.1 mouse_genomes_project 7 88811988 88812999 + MGP_WSBEiJ_P0083541 Olfr293 protein_coding protein_coding MGP_WSBEiJ_T0081076.1 MGP_WSBEiJ_G0031032.1 mouse_genomes_project 7 24737561 24813525 - MGP_WSBEiJ_P0081076 Nlrp9c protein_coding protein_coding MGP_WSBEiJ_T0081077.1 MGP_WSBEiJ_G0031032.1 mouse_genomes_project 7 24785603 24813530 - MGP_WSBEiJ_P0081077 Nlrp9c protein_coding protein_coding MGP_WSBEiJ_T0081078.1 MGP_WSBEiJ_G0031032.1 mouse_genomes_project 7 24794646 24823963 - Nlrp9c protein_coding retained_intron MGP_WSBEiJ_T0081079.1 MGP_WSBEiJ_G0031032.1 mouse_genomes_project 7 24794646 24823959 - Nlrp9c protein_coding processed_transcript MGP_WSBEiJ_T0081080.1 MGP_WSBEiJ_G0031032.1 mouse_genomes_project 7 24811554 24823963 - Nlrp9c protein_coding retained_intron MGP_WSBEiJ_T0080703.1 MGP_WSBEiJ_G0030930.1 mouse_genomes_project 7 17518884 17527814 - MGP_WSBEiJ_P0080703 Gemin7 protein_coding protein_coding MGP_WSBEiJ_T0080704.1 MGP_WSBEiJ_G0030930.1 mouse_genomes_project 7 17518887 17527334 - MGP_WSBEiJ_P0080704 Gemin7 protein_coding protein_coding MGP_WSBEiJ_T0080705.1 MGP_WSBEiJ_G0030930.1 mouse_genomes_project 7 17519025 17526959 - MGP_WSBEiJ_P0080705 Gemin7 protein_coding protein_coding MGP_WSBEiJ_T0080706.1 MGP_WSBEiJ_G0030930.1 mouse_genomes_project 7 17519057 17527080 - MGP_WSBEiJ_P0080706 Gemin7 protein_coding protein_coding MGP_WSBEiJ_T0080707.1 MGP_WSBEiJ_G0030930.1 mouse_genomes_project 7 17519184 17527376 - MGP_WSBEiJ_P0080707 Gemin7 protein_coding protein_coding MGP_WSBEiJ_T0080708.1 MGP_WSBEiJ_G0030930.1 mouse_genomes_project 7 17519362 17527165 - MGP_WSBEiJ_P0080708 Gemin7 protein_coding protein_coding MGP_WSBEiJ_T0086558.1 MGP_WSBEiJ_G0032428.1 mouse_genomes_project 7 150010895 150020830 - MGP_WSBEiJ_P0086558 Ccnd1 protein_coding protein_coding MGP_WSBEiJ_T0086559.1 MGP_WSBEiJ_G0032428.1 mouse_genomes_project 7 150018253 150019156 - Ccnd1 protein_coding retained_intron MGP_WSBEiJ_T0015398.1 MGP_WSBEiJ_G0013528.1 mouse_genomes_project 7 126095145 126095869 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015306.1 MGP_WSBEiJ_G0013436.1 mouse_genomes_project 7 48857331 48858002 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101053.1 MGP_WSBEiJ_G0039510.1 mouse_genomes_project 7 48126739 48742536 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008675.1 MGP_WSBEiJ_G0007014.1 mouse_genomes_project 7 24166623 24171550 + Gm26707 lincRNA lincRNA MGP_WSBEiJ_T0083587.1 MGP_WSBEiJ_G0031644.1 mouse_genomes_project 7 92140089 92166809 - MGP_WSBEiJ_P0083587 l7Rn6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083588.1 MGP_WSBEiJ_G0031644.1 mouse_genomes_project 7 92140306 92166827 - MGP_WSBEiJ_P0083588 l7Rn6 protein_coding protein_coding MGP_WSBEiJ_T0083589.1 MGP_WSBEiJ_G0031644.1 mouse_genomes_project 7 92140339 92166741 - MGP_WSBEiJ_P0083589 l7Rn6 protein_coding protein_coding MGP_WSBEiJ_T0083590.1 MGP_WSBEiJ_G0031644.1 mouse_genomes_project 7 92140958 92146929 - l7Rn6 protein_coding retained_intron MGP_WSBEiJ_T0083591.1 MGP_WSBEiJ_G0031644.1 mouse_genomes_project 7 92154551 92166908 - l7Rn6 protein_coding processed_transcript MGP_WSBEiJ_T0008906.1 MGP_WSBEiJ_G0007174.1 mouse_genomes_project 7 140123236 140139705 - 5830432E09Rik lincRNA lincRNA MGP_WSBEiJ_T0008907.1 MGP_WSBEiJ_G0007174.1 mouse_genomes_project 7 140135852 140139736 - 5830432E09Rik lincRNA lincRNA MGP_WSBEiJ_T0082642.1 MGP_WSBEiJ_G0031418.1 mouse_genomes_project 7 47075824 47097919 - MGP_WSBEiJ_P0082642 Tph1 protein_coding protein_coding MGP_WSBEiJ_T0082643.1 MGP_WSBEiJ_G0031418.1 mouse_genomes_project 7 47075855 47103102 - MGP_WSBEiJ_P0082643 Tph1 protein_coding protein_coding MGP_WSBEiJ_T0082644.1 MGP_WSBEiJ_G0031418.1 mouse_genomes_project 7 47076120 47095831 - MGP_WSBEiJ_P0082644 Tph1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082645.1 MGP_WSBEiJ_G0031418.1 mouse_genomes_project 7 47076120 47095843 - MGP_WSBEiJ_P0082645 Tph1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082646.1 MGP_WSBEiJ_G0031418.1 mouse_genomes_project 7 47080349 47082023 - Tph1 protein_coding retained_intron MGP_WSBEiJ_T0082647.1 MGP_WSBEiJ_G0031418.1 mouse_genomes_project 7 47087446 47091245 - Tph1 protein_coding retained_intron MGP_WSBEiJ_T0082648.1 MGP_WSBEiJ_G0031418.1 mouse_genomes_project 7 47090596 47092860 - Tph1 protein_coding retained_intron MGP_WSBEiJ_T0082649.1 MGP_WSBEiJ_G0031418.1 mouse_genomes_project 7 47090914 47097885 - MGP_WSBEiJ_P0082649 Tph1 protein_coding protein_coding MGP_WSBEiJ_T0084892.1 MGP_WSBEiJ_G0032078.1 mouse_genomes_project 7 124834116 124876506 + MGP_WSBEiJ_P0084892 Mettl9 protein_coding protein_coding MGP_WSBEiJ_T0084046.1 MGP_WSBEiJ_G0031743.1 mouse_genomes_project 7 104826549 104858305 + MGP_WSBEiJ_P0084046 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084047.1 MGP_WSBEiJ_G0031743.1 mouse_genomes_project 7 104826549 104857857 + MGP_WSBEiJ_P0084047 protein_coding protein_coding MGP_WSBEiJ_T0084049.1 MGP_WSBEiJ_G0031743.1 mouse_genomes_project 7 104826614 104857785 + MGP_WSBEiJ_P0084049 protein_coding protein_coding MGP_WSBEiJ_T0084050.1 MGP_WSBEiJ_G0031743.1 mouse_genomes_project 7 104837455 104857785 + MGP_WSBEiJ_P0084050 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084051.1 MGP_WSBEiJ_G0031743.1 mouse_genomes_project 7 104837459 104857777 + MGP_WSBEiJ_P0084051 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083900.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103301255 103316500 - MGP_WSBEiJ_P0083900 Plekhb1 protein_coding protein_coding MGP_WSBEiJ_T0083901.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103302264 103320374 - MGP_WSBEiJ_P0083901 Plekhb1 protein_coding protein_coding MGP_WSBEiJ_T0083902.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103302264 103315046 - MGP_WSBEiJ_P0083902 Plekhb1 protein_coding protein_coding MGP_WSBEiJ_T0083903.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103302264 103320423 - MGP_WSBEiJ_P0083903 Plekhb1 protein_coding protein_coding MGP_WSBEiJ_T0083904.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103302268 103316522 - MGP_WSBEiJ_P0083904 Plekhb1 protein_coding protein_coding MGP_WSBEiJ_T0083905.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103303172 103311857 - Plekhb1 protein_coding retained_intron MGP_WSBEiJ_T0083906.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103303314 103320316 - MGP_WSBEiJ_P0083906 Plekhb1 protein_coding protein_coding MGP_WSBEiJ_T0083907.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103303936 103315169 - MGP_WSBEiJ_P0083907 Plekhb1 protein_coding protein_coding MGP_WSBEiJ_T0083908.1 MGP_WSBEiJ_G0031719.1 mouse_genomes_project 7 103304004 103316488 - MGP_WSBEiJ_P0083908 Plekhb1 protein_coding protein_coding MGP_WSBEiJ_T0101006.1 MGP_WSBEiJ_G0039463.1 mouse_genomes_project 7 16084513 16099959 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099723.1 MGP_WSBEiJ_G0038386.1 mouse_genomes_project 7 60612118 60612185 - Snord64 snoRNA snoRNA MGP_WSBEiJ_T0010727.1 MGP_WSBEiJ_G0008884.1 mouse_genomes_project 7 102129420 102129515 + Mir326 miRNA miRNA MGP_WSBEiJ_T0100327.1 MGP_WSBEiJ_G0038819.1 mouse_genomes_project 7 41462695 41994199 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0084800.1 MGP_WSBEiJ_G0032053.1 mouse_genomes_project 7 123314826 123345921 + MGP_WSBEiJ_P0084800 Acsm1 protein_coding protein_coding MGP_WSBEiJ_T0084801.1 MGP_WSBEiJ_G0032053.1 mouse_genomes_project 7 123325610 123373344 + MGP_WSBEiJ_P0084801 Acsm1 protein_coding protein_coding MGP_WSBEiJ_T0084802.1 MGP_WSBEiJ_G0032053.1 mouse_genomes_project 7 123325642 123373064 + MGP_WSBEiJ_P0084802 Acsm1 protein_coding protein_coding MGP_WSBEiJ_T0083619.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 93374014 94806271 + MGP_WSBEiJ_P0083619 Dlg2 protein_coding protein_coding MGP_WSBEiJ_T0083620.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 93374034 94638692 + Dlg2 protein_coding processed_transcript MGP_WSBEiJ_T0083621.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 93374036 94806271 + MGP_WSBEiJ_P0083621 Dlg2 protein_coding protein_coding MGP_WSBEiJ_T0083622.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 93994252 94346923 + Dlg2 protein_coding retained_intron MGP_WSBEiJ_T0083623.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 94036884 94806271 + MGP_WSBEiJ_P0083623 Dlg2 protein_coding protein_coding MGP_WSBEiJ_T0083624.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 94037141 94284553 + Dlg2 protein_coding processed_transcript MGP_WSBEiJ_T0083625.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 94037143 94489238 + MGP_WSBEiJ_P0083625 Dlg2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083626.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 94412338 94806271 + MGP_WSBEiJ_P0083626 Dlg2 protein_coding protein_coding MGP_WSBEiJ_T0083627.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 94531291 94640392 + Dlg2 protein_coding retained_intron MGP_WSBEiJ_T0083628.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 94580265 94805751 + Dlg2 protein_coding processed_transcript MGP_WSBEiJ_T0083629.1 MGP_WSBEiJ_G0031654.1 mouse_genomes_project 7 94580469 94789461 + Dlg2 protein_coding processed_transcript MGP_WSBEiJ_T0080882.1 MGP_WSBEiJ_G0030986.1 mouse_genomes_project 7 22768453 22786703 + MGP_WSBEiJ_P0080882 Phldb3 protein_coding protein_coding MGP_WSBEiJ_T0080883.1 MGP_WSBEiJ_G0030986.1 mouse_genomes_project 7 22769018 22786694 + MGP_WSBEiJ_P0080883 Phldb3 protein_coding protein_coding MGP_WSBEiJ_T0080884.1 MGP_WSBEiJ_G0030986.1 mouse_genomes_project 7 22776449 22784041 + Phldb3 protein_coding retained_intron MGP_WSBEiJ_T0080885.1 MGP_WSBEiJ_G0030986.1 mouse_genomes_project 7 22776853 22779676 + Phldb3 protein_coding processed_transcript MGP_WSBEiJ_T0005142.1 MGP_WSBEiJ_G0004371.1 mouse_genomes_project 7 58253726 58277336 + Gm9962 antisense antisense MGP_WSBEiJ_T0086309.1 MGP_WSBEiJ_G0032379.1 mouse_genomes_project 7 146729191 146739140 + MGP_WSBEiJ_P0086309 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082717.1 MGP_WSBEiJ_G0031444.1 mouse_genomes_project 7 49479898 49518242 + MGP_WSBEiJ_P0082717 Zdhhc13 protein_coding protein_coding MGP_WSBEiJ_T0082718.1 MGP_WSBEiJ_G0031444.1 mouse_genomes_project 7 49479921 49515519 + MGP_WSBEiJ_P0082718 Zdhhc13 protein_coding protein_coding MGP_WSBEiJ_T0082719.1 MGP_WSBEiJ_G0031444.1 mouse_genomes_project 7 49479927 49493745 + Zdhhc13 protein_coding processed_transcript MGP_WSBEiJ_T0086033.1 MGP_WSBEiJ_G0032306.1 mouse_genomes_project 7 144856055 144857131 - MGP_WSBEiJ_P0086033 Olfr522 protein_coding protein_coding MGP_WSBEiJ_T0010662.1 MGP_WSBEiJ_G0008819.1 mouse_genomes_project 7 17326246 17326321 + Mir343 miRNA miRNA MGP_WSBEiJ_T0002167.1 MGP_WSBEiJ_G0002086.1 mouse_genomes_project 7 36200164 36202547 + TEC TEC MGP_WSBEiJ_T0011477.1 MGP_WSBEiJ_G0009634.1 mouse_genomes_project 7 10652955 10653235 + Gm24909 misc_RNA misc_RNA MGP_WSBEiJ_T0081545.1 MGP_WSBEiJ_G0031155.1 mouse_genomes_project 7 29049941 29052224 - MGP_WSBEiJ_P0081545 Ovol3 protein_coding protein_coding MGP_WSBEiJ_T0015257.1 MGP_WSBEiJ_G0013387.1 mouse_genomes_project 7 24230851 24231203 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084109.1 MGP_WSBEiJ_G0031766.1 mouse_genomes_project 7 105456025 105465772 - MGP_WSBEiJ_P0084109 Trim68 protein_coding protein_coding MGP_WSBEiJ_T0085792.1 MGP_WSBEiJ_G0032247.1 mouse_genomes_project 7 136307597 136340502 + MGP_WSBEiJ_P0085792 Gpr26 protein_coding protein_coding MGP_WSBEiJ_T0099749.1 MGP_WSBEiJ_G0038412.1 mouse_genomes_project 7 122524483 122524597 + Gm26147 snoRNA snoRNA MGP_WSBEiJ_T0083332.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81959066 81969254 - MGP_WSBEiJ_P0083332 Fes protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083333.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81959068 81961747 - Fes protein_coding retained_intron MGP_WSBEiJ_T0083334.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81959068 81969264 - MGP_WSBEiJ_P0083334 Fes protein_coding protein_coding MGP_WSBEiJ_T0083335.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81959068 81960941 - MGP_WSBEiJ_P0083335 Fes protein_coding protein_coding MGP_WSBEiJ_T0083336.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81959073 81969189 - MGP_WSBEiJ_P0083336 Fes protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083337.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81959074 81969259 - MGP_WSBEiJ_P0083337 Fes protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083338.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81959083 81968737 - MGP_WSBEiJ_P0083338 Fes protein_coding protein_coding MGP_WSBEiJ_T0083339.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81965519 81969213 - MGP_WSBEiJ_P0083339 Fes protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083340.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81968230 81969199 - MGP_WSBEiJ_P0083340 Fes protein_coding protein_coding MGP_WSBEiJ_T0083341.1 MGP_WSBEiJ_G0031564.1 mouse_genomes_project 7 81968356 81969212 - Fes protein_coding retained_intron MGP_WSBEiJ_T0005212.1 MGP_WSBEiJ_G0004419.1 mouse_genomes_project 7 131086636 131090454 + Gm31749 antisense antisense MGP_WSBEiJ_T0084249.1 MGP_WSBEiJ_G0031875.1 mouse_genomes_project 7 107868808 107869747 - MGP_WSBEiJ_P0084249 Olfr672 protein_coding protein_coding MGP_WSBEiJ_T0005166.1 MGP_WSBEiJ_G0004389.1 mouse_genomes_project 7 85377181 85413470 - Gm16638 antisense antisense MGP_WSBEiJ_T0002230.1 MGP_WSBEiJ_G0002148.1 mouse_genomes_project 7 80949004 80951127 + TEC TEC MGP_WSBEiJ_T0086332.1 MGP_WSBEiJ_G0032384.1 mouse_genomes_project 7 147076781 147077186 - MGP_WSBEiJ_P0086332 protein_coding protein_coding MGP_WSBEiJ_T0080183.1 MGP_WSBEiJ_G0030747.1 mouse_genomes_project 7 2065933 2073074 - MGP_WSBEiJ_P0080183 Rfpl4 protein_coding protein_coding MGP_WSBEiJ_T0080184.1 MGP_WSBEiJ_G0030747.1 mouse_genomes_project 7 2065933 2073074 - MGP_WSBEiJ_P0080184 Rfpl4 protein_coding protein_coding MGP_WSBEiJ_T0084159.1 MGP_WSBEiJ_G0031813.1 mouse_genomes_project 7 106485588 106486403 + MGP_WSBEiJ_P0084159 protein_coding protein_coding MGP_WSBEiJ_T0008736.1 MGP_WSBEiJ_G0007063.1 mouse_genomes_project 7 64939149 64944495 + Gm20670 lincRNA lincRNA MGP_WSBEiJ_T0081479.1 MGP_WSBEiJ_G0031135.1 mouse_genomes_project 7 28604666 28621663 + MGP_WSBEiJ_P0081479 Zfp790 protein_coding protein_coding MGP_WSBEiJ_T0081480.1 MGP_WSBEiJ_G0031135.1 mouse_genomes_project 7 28604666 28621663 + MGP_WSBEiJ_P0081480 Zfp790 protein_coding protein_coding MGP_WSBEiJ_T0100960.1 MGP_WSBEiJ_G0039417.1 mouse_genomes_project 7 7578606 7610976 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081507.1 MGP_WSBEiJ_G0031143.1 mouse_genomes_project 7 28836704 28843381 - MGP_WSBEiJ_P0081507 Zfp14 protein_coding protein_coding MGP_WSBEiJ_T0081536.1 MGP_WSBEiJ_G0031153.1 mouse_genomes_project 7 29039864 29048775 - MGP_WSBEiJ_P0081536 Tbcb protein_coding protein_coding MGP_WSBEiJ_T0081537.1 MGP_WSBEiJ_G0031153.1 mouse_genomes_project 7 29039866 29043752 - Tbcb protein_coding processed_transcript MGP_WSBEiJ_T0081538.1 MGP_WSBEiJ_G0031153.1 mouse_genomes_project 7 29039870 29043813 - Tbcb protein_coding retained_intron MGP_WSBEiJ_T0015269.1 MGP_WSBEiJ_G0013399.1 mouse_genomes_project 7 33212224 33212811 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101057.1 MGP_WSBEiJ_G0039514.1 mouse_genomes_project 7 48741716 48742536 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002228.1 MGP_WSBEiJ_G0002146.1 mouse_genomes_project 7 80756592 80761878 + TEC TEC MGP_WSBEiJ_T0002264.1 MGP_WSBEiJ_G0002182.1 mouse_genomes_project 7 131239853 131241097 - TEC TEC MGP_WSBEiJ_T0011500.1 MGP_WSBEiJ_G0009657.1 mouse_genomes_project 7 147530245 147530315 + Gm27786 misc_RNA misc_RNA MGP_WSBEiJ_T0084533.1 MGP_WSBEiJ_G0031999.1 mouse_genomes_project 7 114137192 114138360 - Rnf141 protein_coding retained_intron MGP_WSBEiJ_T0084534.1 MGP_WSBEiJ_G0031999.1 mouse_genomes_project 7 114137374 114158092 - MGP_WSBEiJ_P0084534 Rnf141 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084535.1 MGP_WSBEiJ_G0031999.1 mouse_genomes_project 7 114150284 114182983 - MGP_WSBEiJ_P0084535 Rnf141 protein_coding protein_coding MGP_WSBEiJ_T0084536.1 MGP_WSBEiJ_G0031999.1 mouse_genomes_project 7 114152337 114182907 - MGP_WSBEiJ_P0084536 Rnf141 protein_coding protein_coding MGP_WSBEiJ_T0084537.1 MGP_WSBEiJ_G0031999.1 mouse_genomes_project 7 114153210 114158038 - MGP_WSBEiJ_P0084537 Rnf141 protein_coding protein_coding MGP_WSBEiJ_T0084538.1 MGP_WSBEiJ_G0031999.1 mouse_genomes_project 7 114153346 114158363 - Rnf141 protein_coding retained_intron MGP_WSBEiJ_T0084539.1 MGP_WSBEiJ_G0031999.1 mouse_genomes_project 7 114168219 114182959 - Rnf141 protein_coding processed_transcript MGP_WSBEiJ_T0084540.1 MGP_WSBEiJ_G0031999.1 mouse_genomes_project 7 114171337 114182714 - MGP_WSBEiJ_P0084540 Rnf141 protein_coding protein_coding MGP_WSBEiJ_T0015304.1 MGP_WSBEiJ_G0013434.1 mouse_genomes_project 7 44525920 44526894 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080269.1 MGP_WSBEiJ_G0030795.1 mouse_genomes_project 7 9534867 9535788 - MGP_WSBEiJ_P0080269 Vmn1r81 protein_coding protein_coding MGP_WSBEiJ_T0011501.1 MGP_WSBEiJ_G0009658.1 mouse_genomes_project 7 148250898 148251358 + Gm27395 misc_RNA misc_RNA MGP_WSBEiJ_T0101054.1 MGP_WSBEiJ_G0039511.1 mouse_genomes_project 7 48409362 48409847 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083528.1 MGP_WSBEiJ_G0031614.1 mouse_genomes_project 7 88354144 88355226 - MGP_WSBEiJ_P0083528 Olfr310 protein_coding protein_coding MGP_WSBEiJ_T0086422.1 MGP_WSBEiJ_G0032397.1 mouse_genomes_project 7 147806595 147834885 + MGP_WSBEiJ_P0086422 protein_coding protein_coding MGP_WSBEiJ_T0086423.1 MGP_WSBEiJ_G0032397.1 mouse_genomes_project 7 147826738 147834084 + protein_coding processed_transcript MGP_WSBEiJ_T0011497.1 MGP_WSBEiJ_G0009654.1 mouse_genomes_project 7 134796370 134796446 - Gm27884 misc_RNA misc_RNA MGP_WSBEiJ_T0086031.1 MGP_WSBEiJ_G0032305.1 mouse_genomes_project 7 144844938 144849182 - MGP_WSBEiJ_P0086031 Sprn protein_coding protein_coding MGP_WSBEiJ_T0086032.1 MGP_WSBEiJ_G0032305.1 mouse_genomes_project 7 144845274 144847852 - Sprn protein_coding processed_transcript MGP_WSBEiJ_T0017825.1 MGP_WSBEiJ_G0015116.1 mouse_genomes_project 7 132639959 132654598 + Gm45019 processed_transcript lincRNA MGP_WSBEiJ_T0017826.1 MGP_WSBEiJ_G0015116.1 mouse_genomes_project 7 132653244 132654597 + Gm45019 processed_transcript retained_intron MGP_WSBEiJ_T0101044.1 MGP_WSBEiJ_G0039501.1 mouse_genomes_project 7 44252190 44254439 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010691.1 MGP_WSBEiJ_G0008848.1 mouse_genomes_project 7 47561467 47561526 - Mir7056 miRNA miRNA MGP_WSBEiJ_T0015206.1 MGP_WSBEiJ_G0013336.1 mouse_genomes_project 7 1107184 1107338 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082531.1 MGP_WSBEiJ_G0031387.1 mouse_genomes_project 7 45986043 45998474 + MGP_WSBEiJ_P0082531 Rasip1 protein_coding protein_coding MGP_WSBEiJ_T0080376.1 MGP_WSBEiJ_G0030828.1 mouse_genomes_project 7 10849675 10867225 - MGP_WSBEiJ_P0080376 Bsph2 protein_coding protein_coding MGP_WSBEiJ_T0080377.1 MGP_WSBEiJ_G0030828.1 mouse_genomes_project 7 10849677 10867225 - MGP_WSBEiJ_P0080377 Bsph2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0017736.1 MGP_WSBEiJ_G0015078.1 mouse_genomes_project 7 25759221 25770526 + Gm44641 processed_transcript processed_transcript MGP_WSBEiJ_T0100993.1 MGP_WSBEiJ_G0039450.1 mouse_genomes_project 7 12064376 12064871 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0101042.1 MGP_WSBEiJ_G0039499.1 mouse_genomes_project 7 44217023 44236918 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002207.1 MGP_WSBEiJ_G0002126.1 mouse_genomes_project 7 74641550 74643189 + TEC TEC MGP_WSBEiJ_T0080379.1 MGP_WSBEiJ_G0030830.1 mouse_genomes_project 7 11220418 11241843 - MGP_WSBEiJ_P0080379 protein_coding protein_coding MGP_WSBEiJ_T0099725.1 MGP_WSBEiJ_G0038388.1 mouse_genomes_project 7 63446847 63446975 + Gm22494 snoRNA snoRNA MGP_WSBEiJ_T0081303.1 MGP_WSBEiJ_G0031096.1 mouse_genomes_project 7 27085557 27095678 + MGP_WSBEiJ_P0081303 Lrfn1 protein_coding protein_coding MGP_WSBEiJ_T0081304.1 MGP_WSBEiJ_G0031096.1 mouse_genomes_project 7 27085725 27099816 + MGP_WSBEiJ_P0081304 Lrfn1 protein_coding protein_coding MGP_WSBEiJ_T0081305.1 MGP_WSBEiJ_G0031096.1 mouse_genomes_project 7 27085815 27096845 + Lrfn1 protein_coding retained_intron MGP_WSBEiJ_T0081306.1 MGP_WSBEiJ_G0031096.1 mouse_genomes_project 7 27095050 27099751 + MGP_WSBEiJ_P0081306 Lrfn1 protein_coding protein_coding MGP_WSBEiJ_T0081307.1 MGP_WSBEiJ_G0031096.1 mouse_genomes_project 7 27095050 27107053 + MGP_WSBEiJ_P0081307 Lrfn1 protein_coding protein_coding MGP_WSBEiJ_T0081128.1 MGP_WSBEiJ_G0031050.1 mouse_genomes_project 7 25685428 25689387 - Snrpa protein_coding retained_intron MGP_WSBEiJ_T0081129.1 MGP_WSBEiJ_G0031050.1 mouse_genomes_project 7 25685430 25697801 - MGP_WSBEiJ_P0081129 Snrpa protein_coding protein_coding MGP_WSBEiJ_T0081130.1 MGP_WSBEiJ_G0031050.1 mouse_genomes_project 7 25685430 25698286 - MGP_WSBEiJ_P0081130 Snrpa protein_coding protein_coding MGP_WSBEiJ_T0081131.1 MGP_WSBEiJ_G0031050.1 mouse_genomes_project 7 25685430 25698312 - MGP_WSBEiJ_P0081131 Snrpa protein_coding protein_coding MGP_WSBEiJ_T0081132.1 MGP_WSBEiJ_G0031050.1 mouse_genomes_project 7 25687707 25697801 - MGP_WSBEiJ_P0081132 Snrpa protein_coding protein_coding MGP_WSBEiJ_T0081133.1 MGP_WSBEiJ_G0031050.1 mouse_genomes_project 7 25692086 25698065 - MGP_WSBEiJ_P0081133 Snrpa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081134.1 MGP_WSBEiJ_G0031050.1 mouse_genomes_project 7 25694829 25698194 - Snrpa protein_coding retained_intron MGP_WSBEiJ_T0010756.1 MGP_WSBEiJ_G0008913.1 mouse_genomes_project 7 148580063 148580152 - Mir7064 miRNA miRNA MGP_WSBEiJ_T0015284.1 MGP_WSBEiJ_G0013414.1 mouse_genomes_project 7 41359096 41360936 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010723.1 MGP_WSBEiJ_G0008880.1 mouse_genomes_project 7 83197102 83197175 + Mir1839 miRNA miRNA MGP_WSBEiJ_T0084093.1 MGP_WSBEiJ_G0031751.1 mouse_genomes_project 7 105041340 105215030 + MGP_WSBEiJ_P0084093 Stim1 protein_coding protein_coding MGP_WSBEiJ_T0085412.1 MGP_WSBEiJ_G0032176.1 mouse_genomes_project 7 131533147 131536204 - Zfp688 protein_coding retained_intron MGP_WSBEiJ_T0085413.1 MGP_WSBEiJ_G0032176.1 mouse_genomes_project 7 131533147 131536216 - MGP_WSBEiJ_P0085413 Zfp688 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085414.1 MGP_WSBEiJ_G0032176.1 mouse_genomes_project 7 131533147 131536211 - MGP_WSBEiJ_P0085414 Zfp688 protein_coding protein_coding MGP_WSBEiJ_T0085415.1 MGP_WSBEiJ_G0032176.1 mouse_genomes_project 7 131533149 131536245 - Zfp688 protein_coding retained_intron MGP_WSBEiJ_T0085416.1 MGP_WSBEiJ_G0032176.1 mouse_genomes_project 7 131533526 131536027 - MGP_WSBEiJ_P0085416 Zfp688 protein_coding protein_coding MGP_WSBEiJ_T0085417.1 MGP_WSBEiJ_G0032176.1 mouse_genomes_project 7 131533771 131536144 - MGP_WSBEiJ_P0085417 Zfp688 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084258.1 MGP_WSBEiJ_G0031884.1 mouse_genomes_project 7 108065089 108066107 - MGP_WSBEiJ_P0084258 Olfr686 protein_coding protein_coding MGP_WSBEiJ_T0099748.1 MGP_WSBEiJ_G0038411.1 mouse_genomes_project 7 121792710 121792841 + Gm25683 snoRNA snoRNA MGP_WSBEiJ_T0098467.1 MGP_WSBEiJ_G0037130.1 mouse_genomes_project 7 16332658 16332765 + Gm26062 snRNA snRNA MGP_WSBEiJ_T0015369.1 MGP_WSBEiJ_G0013499.1 mouse_genomes_project 7 100408887 100409278 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086002.1 MGP_WSBEiJ_G0032299.1 mouse_genomes_project 7 144755011 144767778 - MGP_WSBEiJ_P0086002 Caly protein_coding unknown_likely_coding MGP_WSBEiJ_T0082705.1 MGP_WSBEiJ_G0031436.1 mouse_genomes_project 7 47791359 47979517 - MGP_WSBEiJ_P0082705 protein_coding protein_coding MGP_WSBEiJ_T0080644.1 MGP_WSBEiJ_G0030913.1 mouse_genomes_project 7 17181992 17202520 - MGP_WSBEiJ_P0080644 Vasp protein_coding protein_coding MGP_WSBEiJ_T0080645.1 MGP_WSBEiJ_G0030913.1 mouse_genomes_project 7 17182647 17183195 - Vasp protein_coding retained_intron MGP_WSBEiJ_T0080646.1 MGP_WSBEiJ_G0030913.1 mouse_genomes_project 7 17185721 17186137 - Vasp protein_coding processed_transcript MGP_WSBEiJ_T0080647.1 MGP_WSBEiJ_G0030913.1 mouse_genomes_project 7 17185922 17194509 - Vasp protein_coding processed_transcript MGP_WSBEiJ_T0085904.1 MGP_WSBEiJ_G0032271.1 mouse_genomes_project 7 139891033 139894284 + MGP_WSBEiJ_P0085904 Foxi2 protein_coding protein_coding MGP_WSBEiJ_T0084242.1 MGP_WSBEiJ_G0031868.1 mouse_genomes_project 7 107707843 107710965 - MGP_WSBEiJ_P0084242 Usp17lb protein_coding protein_coding MGP_WSBEiJ_T0082366.1 MGP_WSBEiJ_G0031340.1 mouse_genomes_project 7 45245407 45264612 - MGP_WSBEiJ_P0082366 Cpt1c protein_coding protein_coding MGP_WSBEiJ_T0081554.1 MGP_WSBEiJ_G0031158.1 mouse_genomes_project 7 29112645 29129400 + MGP_WSBEiJ_P0081554 Clip3 protein_coding protein_coding MGP_WSBEiJ_T0081555.1 MGP_WSBEiJ_G0031158.1 mouse_genomes_project 7 29112701 29113647 + Clip3 protein_coding retained_intron MGP_WSBEiJ_T0081556.1 MGP_WSBEiJ_G0031158.1 mouse_genomes_project 7 29112702 29118141 + MGP_WSBEiJ_P0081556 Clip3 protein_coding protein_coding MGP_WSBEiJ_T0081557.1 MGP_WSBEiJ_G0031158.1 mouse_genomes_project 7 29112712 29117897 + MGP_WSBEiJ_P0081557 Clip3 protein_coding protein_coding MGP_WSBEiJ_T0081558.1 MGP_WSBEiJ_G0031158.1 mouse_genomes_project 7 29112931 29117908 + MGP_WSBEiJ_P0081558 Clip3 protein_coding protein_coding MGP_WSBEiJ_T0081559.1 MGP_WSBEiJ_G0031158.1 mouse_genomes_project 7 29118090 29120130 + Clip3 protein_coding processed_transcript MGP_WSBEiJ_T0081560.1 MGP_WSBEiJ_G0031158.1 mouse_genomes_project 7 29125775 29128336 + Clip3 protein_coding processed_transcript MGP_WSBEiJ_T0098510.1 MGP_WSBEiJ_G0037173.1 mouse_genomes_project 7 124822911 124823014 - Gm25924 snRNA snRNA MGP_WSBEiJ_T0081235.1 MGP_WSBEiJ_G0031073.1 mouse_genomes_project 7 26419852 26440757 + MGP_WSBEiJ_P0081235 protein_coding protein_coding MGP_WSBEiJ_T0082706.1 MGP_WSBEiJ_G0031437.1 mouse_genomes_project 7 47791363 47979546 - MGP_WSBEiJ_P0082706 protein_coding protein_coding MGP_WSBEiJ_T0082707.1 MGP_WSBEiJ_G0031437.1 mouse_genomes_project 7 47791364 48031355 - MGP_WSBEiJ_P0082707 protein_coding protein_coding MGP_WSBEiJ_T0079906.1 MGP_WSBEiJ_G0030687.1 mouse_genomes_project 7 481835 488169 - MGP_WSBEiJ_P0079906 Oscar protein_coding protein_coding MGP_WSBEiJ_T0079907.1 MGP_WSBEiJ_G0030687.1 mouse_genomes_project 7 481835 488193 - MGP_WSBEiJ_P0079907 Oscar protein_coding protein_coding MGP_WSBEiJ_T0079908.1 MGP_WSBEiJ_G0030687.1 mouse_genomes_project 7 481835 488193 - MGP_WSBEiJ_P0079908 Oscar protein_coding protein_coding MGP_WSBEiJ_T0079909.1 MGP_WSBEiJ_G0030687.1 mouse_genomes_project 7 483193 488121 - Oscar protein_coding processed_transcript MGP_WSBEiJ_T0008837.1 MGP_WSBEiJ_G0007131.1 mouse_genomes_project 7 113286429 113297801 - lincRNA lincRNA MGP_WSBEiJ_T0008838.1 MGP_WSBEiJ_G0007131.1 mouse_genomes_project 7 113286457 113287287 - lincRNA lincRNA MGP_WSBEiJ_T0008839.1 MGP_WSBEiJ_G0007131.1 mouse_genomes_project 7 113286465 113454680 - lincRNA lincRNA MGP_WSBEiJ_T0008840.1 MGP_WSBEiJ_G0007131.1 mouse_genomes_project 7 113290007 113297786 - lincRNA lincRNA MGP_WSBEiJ_T0086097.1 MGP_WSBEiJ_G0032338.1 mouse_genomes_project 7 145698551 145706493 + MGP_WSBEiJ_P0086097 Nlrp6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086098.1 MGP_WSBEiJ_G0032338.1 mouse_genomes_project 7 145699786 145707568 + MGP_WSBEiJ_P0086098 Nlrp6 protein_coding protein_coding MGP_WSBEiJ_T0086099.1 MGP_WSBEiJ_G0032338.1 mouse_genomes_project 7 145699955 145706520 + MGP_WSBEiJ_P0086099 Nlrp6 protein_coding protein_coding MGP_WSBEiJ_T0086100.1 MGP_WSBEiJ_G0032338.1 mouse_genomes_project 7 145700991 145701741 + Nlrp6 protein_coding retained_intron MGP_WSBEiJ_T0008831.1 MGP_WSBEiJ_G0007127.1 mouse_genomes_project 7 102375541 102377090 - F730035P03Rik lincRNA lincRNA MGP_WSBEiJ_T0084378.1 MGP_WSBEiJ_G0031918.1 mouse_genomes_project 7 109892552 109895693 - MGP_WSBEiJ_P0084378 Olfr702 protein_coding protein_coding MGP_WSBEiJ_T0100970.1 MGP_WSBEiJ_G0039427.1 mouse_genomes_project 7 9229053 9229341 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015333.1 MGP_WSBEiJ_G0013463.1 mouse_genomes_project 7 74922049 74929314 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082924.1 MGP_WSBEiJ_G0031490.1 mouse_genomes_project 7 65372828 65637934 + MGP_WSBEiJ_P0082924 Apba2 protein_coding protein_coding MGP_WSBEiJ_T0082925.1 MGP_WSBEiJ_G0031490.1 mouse_genomes_project 7 65373071 65577098 + MGP_WSBEiJ_P0082925 Apba2 protein_coding protein_coding MGP_WSBEiJ_T0082926.1 MGP_WSBEiJ_G0031490.1 mouse_genomes_project 7 65373260 65577162 + MGP_WSBEiJ_P0082926 Apba2 protein_coding protein_coding MGP_WSBEiJ_T0082927.1 MGP_WSBEiJ_G0031490.1 mouse_genomes_project 7 65514869 65637914 + MGP_WSBEiJ_P0082927 Apba2 protein_coding protein_coding MGP_WSBEiJ_T0082928.1 MGP_WSBEiJ_G0031490.1 mouse_genomes_project 7 65611039 65626157 + Apba2 protein_coding processed_transcript MGP_WSBEiJ_T0082929.1 MGP_WSBEiJ_G0031490.1 mouse_genomes_project 7 65625477 65637434 + Apba2 protein_coding processed_transcript MGP_WSBEiJ_T0082930.1 MGP_WSBEiJ_G0031490.1 mouse_genomes_project 7 65626221 65637473 + MGP_WSBEiJ_P0082930 Apba2 protein_coding protein_coding MGP_WSBEiJ_T0082841.1 MGP_WSBEiJ_G0031470.1 mouse_genomes_project 7 58275066 58380173 - MGP_WSBEiJ_P0082841 Gabra5 protein_coding protein_coding MGP_WSBEiJ_T0082842.1 MGP_WSBEiJ_G0031470.1 mouse_genomes_project 7 58275113 58379535 - MGP_WSBEiJ_P0082842 Gabra5 protein_coding protein_coding MGP_WSBEiJ_T0082843.1 MGP_WSBEiJ_G0031470.1 mouse_genomes_project 7 58275299 58380223 - MGP_WSBEiJ_P0082843 Gabra5 protein_coding protein_coding MGP_WSBEiJ_T0081950.1 MGP_WSBEiJ_G0031236.1 mouse_genomes_project 7 34765233 34769917 - MGP_WSBEiJ_P0081950 Faap24 protein_coding protein_coding MGP_WSBEiJ_T0081951.1 MGP_WSBEiJ_G0031236.1 mouse_genomes_project 7 34765386 34769794 - Faap24 protein_coding retained_intron MGP_WSBEiJ_T0081952.1 MGP_WSBEiJ_G0031236.1 mouse_genomes_project 7 34765777 34769789 - MGP_WSBEiJ_P0081952 Faap24 protein_coding protein_coding MGP_WSBEiJ_T0082715.1 MGP_WSBEiJ_G0031442.1 mouse_genomes_project 7 49261452 49268497 - MGP_WSBEiJ_P0082715 Mrgprb2 protein_coding protein_coding MGP_WSBEiJ_T0015412.1 MGP_WSBEiJ_G0013542.1 mouse_genomes_project 7 132155964 132156743 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015400.1 MGP_WSBEiJ_G0013530.1 mouse_genomes_project 7 126722342 126722669 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097456.1 MGP_WSBEiJ_G0036126.1 mouse_genomes_project 7 34391606 34392744 - Gm44836 sense_intronic sense_intronic MGP_WSBEiJ_T0100995.1 MGP_WSBEiJ_G0039452.1 mouse_genomes_project 7 12317949 12318206 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084963.1 MGP_WSBEiJ_G0032096.1 mouse_genomes_project 7 126538865 126651517 + MGP_WSBEiJ_P0084963 Cacng3 protein_coding protein_coding MGP_WSBEiJ_T0084964.1 MGP_WSBEiJ_G0032096.1 mouse_genomes_project 7 126539755 126650545 + MGP_WSBEiJ_P0084964 Cacng3 protein_coding protein_coding MGP_WSBEiJ_T0084965.1 MGP_WSBEiJ_G0032096.1 mouse_genomes_project 7 126539782 126650664 + MGP_WSBEiJ_P0084965 Cacng3 protein_coding protein_coding MGP_WSBEiJ_T0002195.1 MGP_WSBEiJ_G0002114.1 mouse_genomes_project 7 58658223 58660460 + TEC TEC MGP_WSBEiJ_T0010699.1 MGP_WSBEiJ_G0008856.1 mouse_genomes_project 7 62486459 62486539 - Gm23490 miRNA miRNA MGP_WSBEiJ_T0008701.1 MGP_WSBEiJ_G0007039.1 mouse_genomes_project 7 36807847 36811057 - lincRNA lincRNA MGP_WSBEiJ_T0015427.1 MGP_WSBEiJ_G0013557.1 mouse_genomes_project 7 148608686 148609242 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084133.1 MGP_WSBEiJ_G0031788.1 mouse_genomes_project 7 105938229 105939183 - MGP_WSBEiJ_P0084133 Olfr589 protein_coding protein_coding MGP_WSBEiJ_T0085981.1 MGP_WSBEiJ_G0032292.1 mouse_genomes_project 7 144580669 144609593 + MGP_WSBEiJ_P0085981 Kndc1 protein_coding protein_coding MGP_WSBEiJ_T0085982.1 MGP_WSBEiJ_G0032292.1 mouse_genomes_project 7 144580669 144629083 + MGP_WSBEiJ_P0085982 Kndc1 protein_coding protein_coding MGP_WSBEiJ_T0085983.1 MGP_WSBEiJ_G0032292.1 mouse_genomes_project 7 144580812 144600281 + MGP_WSBEiJ_P0085983 Kndc1 protein_coding protein_coding MGP_WSBEiJ_T0085984.1 MGP_WSBEiJ_G0032292.1 mouse_genomes_project 7 144609368 144629083 + Kndc1 protein_coding retained_intron MGP_WSBEiJ_T0084140.1 MGP_WSBEiJ_G0031794.1 mouse_genomes_project 7 106126604 106127552 + MGP_WSBEiJ_P0084140 Olfr599 protein_coding protein_coding MGP_WSBEiJ_T0017821.1 MGP_WSBEiJ_G0015114.1 mouse_genomes_project 7 132350583 132364073 - 4931431B13Rik processed_transcript antisense MGP_WSBEiJ_T0017822.1 MGP_WSBEiJ_G0015114.1 mouse_genomes_project 7 132362822 132364069 - 4931431B13Rik processed_transcript retained_intron MGP_WSBEiJ_T0086540.1 MGP_WSBEiJ_G0032423.1 mouse_genomes_project 7 149655279 149810544 - MGP_WSBEiJ_P0086540 Ano1 protein_coding protein_coding MGP_WSBEiJ_T0086541.1 MGP_WSBEiJ_G0032423.1 mouse_genomes_project 7 149655288 149810592 - MGP_WSBEiJ_P0086541 Ano1 protein_coding protein_coding MGP_WSBEiJ_T0086542.1 MGP_WSBEiJ_G0032423.1 mouse_genomes_project 7 149655288 149810615 - MGP_WSBEiJ_P0086542 Ano1 protein_coding protein_coding MGP_WSBEiJ_T0086543.1 MGP_WSBEiJ_G0032423.1 mouse_genomes_project 7 149662181 149675062 - Ano1 protein_coding retained_intron MGP_WSBEiJ_T0086544.1 MGP_WSBEiJ_G0032423.1 mouse_genomes_project 7 149688338 149739189 - MGP_WSBEiJ_P0086544 Ano1 protein_coding protein_coding MGP_WSBEiJ_T0086545.1 MGP_WSBEiJ_G0032423.1 mouse_genomes_project 7 149717143 149823959 - MGP_WSBEiJ_P0086545 Ano1 protein_coding protein_coding MGP_WSBEiJ_T0086546.1 MGP_WSBEiJ_G0032423.1 mouse_genomes_project 7 149720743 149739186 - Ano1 protein_coding retained_intron MGP_WSBEiJ_T0086547.1 MGP_WSBEiJ_G0032423.1 mouse_genomes_project 7 149722249 149748674 - MGP_WSBEiJ_P0086547 Ano1 protein_coding protein_coding MGP_WSBEiJ_T0002204.1 MGP_WSBEiJ_G0002123.1 mouse_genomes_project 7 66274433 66274854 - TEC TEC MGP_WSBEiJ_T0005128.1 MGP_WSBEiJ_G0004362.1 mouse_genomes_project 7 40494740 40582159 - antisense antisense MGP_WSBEiJ_T0005129.1 MGP_WSBEiJ_G0004362.1 mouse_genomes_project 7 40530383 40579292 - antisense antisense MGP_WSBEiJ_T0005130.1 MGP_WSBEiJ_G0004362.1 mouse_genomes_project 7 40532494 40556341 - antisense antisense MGP_WSBEiJ_T0101005.1 MGP_WSBEiJ_G0039462.1 mouse_genomes_project 7 15634217 15680392 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080436.1 MGP_WSBEiJ_G0030851.1 mouse_genomes_project 7 13781387 13789275 - Dhx34 protein_coding retained_intron MGP_WSBEiJ_T0080437.1 MGP_WSBEiJ_G0030851.1 mouse_genomes_project 7 13781387 13807161 - MGP_WSBEiJ_P0080437 Dhx34 protein_coding protein_coding MGP_WSBEiJ_T0080438.1 MGP_WSBEiJ_G0030851.1 mouse_genomes_project 7 13781461 13807156 - MGP_WSBEiJ_P0080438 Dhx34 protein_coding protein_coding MGP_WSBEiJ_T0080439.1 MGP_WSBEiJ_G0030851.1 mouse_genomes_project 7 13781461 13807117 - MGP_WSBEiJ_P0080439 Dhx34 protein_coding protein_coding MGP_WSBEiJ_T0080440.1 MGP_WSBEiJ_G0030851.1 mouse_genomes_project 7 13781461 13807117 - MGP_WSBEiJ_P0080440 Dhx34 protein_coding protein_coding MGP_WSBEiJ_T0080441.1 MGP_WSBEiJ_G0030851.1 mouse_genomes_project 7 13781464 13807117 - MGP_WSBEiJ_P0080441 Dhx34 protein_coding protein_coding MGP_WSBEiJ_T0080442.1 MGP_WSBEiJ_G0030851.1 mouse_genomes_project 7 13791061 13798516 - Dhx34 protein_coding processed_transcript MGP_WSBEiJ_T0008797.1 MGP_WSBEiJ_G0007106.1 mouse_genomes_project 7 81072638 81073974 - Gm45168 lincRNA lincRNA MGP_WSBEiJ_T0008798.1 MGP_WSBEiJ_G0007106.1 mouse_genomes_project 7 81072779 81073985 - Gm45168 lincRNA lincRNA MGP_WSBEiJ_T0101035.1 MGP_WSBEiJ_G0039492.1 mouse_genomes_project 7 44163059 44260110 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083060.1 MGP_WSBEiJ_G0031515.1 mouse_genomes_project 7 71468948 71477605 - MGP_WSBEiJ_P0083060 Nr2f2 protein_coding protein_coding MGP_WSBEiJ_T0083061.1 MGP_WSBEiJ_G0031515.1 mouse_genomes_project 7 71471426 71484736 - MGP_WSBEiJ_P0083061 Nr2f2 protein_coding protein_coding MGP_WSBEiJ_T0008766.1 MGP_WSBEiJ_G0007086.1 mouse_genomes_project 7 74316423 74318533 + 4933435G04Rik lincRNA lincRNA MGP_WSBEiJ_T0080289.1 MGP_WSBEiJ_G0030806.1 mouse_genomes_project 7 10105006 10121406 + MGP_WSBEiJ_P0080289 Zfp110 protein_coding protein_coding MGP_WSBEiJ_T0080290.1 MGP_WSBEiJ_G0030806.1 mouse_genomes_project 7 10105061 10106327 + Zfp110 protein_coding processed_transcript MGP_WSBEiJ_T0080291.1 MGP_WSBEiJ_G0030806.1 mouse_genomes_project 7 10105282 10106919 + Zfp110 protein_coding retained_intron MGP_WSBEiJ_T0080292.1 MGP_WSBEiJ_G0030806.1 mouse_genomes_project 7 10105728 10120995 + MGP_WSBEiJ_P0080292 Zfp110 protein_coding protein_coding MGP_WSBEiJ_T0080293.1 MGP_WSBEiJ_G0030806.1 mouse_genomes_project 7 10106523 10115153 + Zfp110 protein_coding processed_transcript MGP_WSBEiJ_T0085516.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923332 131926966 + MGP_WSBEiJ_P0085516 Hsd3b7 protein_coding protein_coding MGP_WSBEiJ_T0085517.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923743 131926958 + Hsd3b7 protein_coding retained_intron MGP_WSBEiJ_T0085518.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923743 131926958 + Hsd3b7 protein_coding retained_intron MGP_WSBEiJ_T0085519.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923753 131926958 + MGP_WSBEiJ_P0085519 Hsd3b7 protein_coding protein_coding MGP_WSBEiJ_T0085520.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923753 131925554 + MGP_WSBEiJ_P0085520 Hsd3b7 protein_coding protein_coding MGP_WSBEiJ_T0085521.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923775 131925178 + MGP_WSBEiJ_P0085521 Hsd3b7 protein_coding protein_coding MGP_WSBEiJ_T0085522.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923785 131925426 + MGP_WSBEiJ_P0085522 Hsd3b7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085523.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923786 131925379 + Hsd3b7 protein_coding retained_intron MGP_WSBEiJ_T0085524.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923797 131925269 + Hsd3b7 protein_coding retained_intron MGP_WSBEiJ_T0085525.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923810 131925483 + Hsd3b7 protein_coding retained_intron MGP_WSBEiJ_T0085526.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131923819 131925194 + MGP_WSBEiJ_P0085526 Hsd3b7 protein_coding protein_coding MGP_WSBEiJ_T0085527.1 MGP_WSBEiJ_G0032194.1 mouse_genomes_project 7 131924098 131924676 + MGP_WSBEiJ_P0085527 Hsd3b7 protein_coding protein_coding MGP_WSBEiJ_T0080166.1 MGP_WSBEiJ_G0030737.1 mouse_genomes_project 7 1968178 1971164 + MGP_WSBEiJ_P0080166 Zfp524 protein_coding protein_coding MGP_WSBEiJ_T0084883.1 MGP_WSBEiJ_G0032074.1 mouse_genomes_project 7 124712998 124743493 + MGP_WSBEiJ_P0084883 Polr3e protein_coding protein_coding MGP_WSBEiJ_T0084884.1 MGP_WSBEiJ_G0032074.1 mouse_genomes_project 7 124712998 124743493 + MGP_WSBEiJ_P0084884 Polr3e protein_coding protein_coding MGP_WSBEiJ_T0100330.1 MGP_WSBEiJ_G0038821.1 mouse_genomes_project 7 44409568 44446078 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0099716.1 MGP_WSBEiJ_G0038379.1 mouse_genomes_project 7 59032384 59032516 - Gm26288 snoRNA snoRNA MGP_WSBEiJ_T0098462.1 MGP_WSBEiJ_G0037125.1 mouse_genomes_project 7 2245833 2245940 - Gm23942 snRNA snRNA MGP_WSBEiJ_T0010656.1 MGP_WSBEiJ_G0008813.1 mouse_genomes_project 7 2087421 2087499 - Gm26217 miRNA miRNA MGP_WSBEiJ_T0096840.1 MGP_WSBEiJ_G0035521.1 mouse_genomes_project 7 72482453 72482996 - pseudogene pseudogene MGP_WSBEiJ_T0082400.1 MGP_WSBEiJ_G0031356.1 mouse_genomes_project 7 45470044 45475728 + MGP_WSBEiJ_P0082400 Pih1d1 protein_coding protein_coding MGP_WSBEiJ_T0082401.1 MGP_WSBEiJ_G0031356.1 mouse_genomes_project 7 45471598 45475728 + MGP_WSBEiJ_P0082401 Pih1d1 protein_coding protein_coding MGP_WSBEiJ_T0085960.1 MGP_WSBEiJ_G0032288.1 mouse_genomes_project 7 144042445 144238571 + MGP_WSBEiJ_P0085960 Inpp5a protein_coding protein_coding MGP_WSBEiJ_T0085961.1 MGP_WSBEiJ_G0032288.1 mouse_genomes_project 7 144042446 144238571 + MGP_WSBEiJ_P0085961 Inpp5a protein_coding protein_coding MGP_WSBEiJ_T0085962.1 MGP_WSBEiJ_G0032288.1 mouse_genomes_project 7 144053886 144238144 + MGP_WSBEiJ_P0085962 Inpp5a protein_coding protein_coding MGP_WSBEiJ_T0085963.1 MGP_WSBEiJ_G0032288.1 mouse_genomes_project 7 144112342 144170405 + Inpp5a protein_coding processed_transcript MGP_WSBEiJ_T0085964.1 MGP_WSBEiJ_G0032288.1 mouse_genomes_project 7 144139641 144155956 + Inpp5a protein_coding processed_transcript MGP_WSBEiJ_T0085965.1 MGP_WSBEiJ_G0032288.1 mouse_genomes_project 7 144182786 144234128 + Inpp5a protein_coding processed_transcript MGP_WSBEiJ_T0015351.1 MGP_WSBEiJ_G0013481.1 mouse_genomes_project 7 87134226 87134872 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100150.1 MGP_WSBEiJ_G0038732.1 mouse_genomes_project 7 130154320 130158699 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100151.1 MGP_WSBEiJ_G0038732.1 mouse_genomes_project 7 130155940 130156897 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099732.1 MGP_WSBEiJ_G0038395.1 mouse_genomes_project 7 95518449 95518575 - Gm25860 snoRNA snoRNA MGP_WSBEiJ_T0084375.1 MGP_WSBEiJ_G0031916.1 mouse_genomes_project 7 109874487 109875438 - MGP_WSBEiJ_P0084375 Olfr700 protein_coding protein_coding MGP_WSBEiJ_T0099750.1 MGP_WSBEiJ_G0038413.1 mouse_genomes_project 7 123011260 123011386 - Gm23321 snoRNA snoRNA MGP_WSBEiJ_T0011489.1 MGP_WSBEiJ_G0009646.1 mouse_genomes_project 7 93408801 93409011 - Gm27470 misc_RNA misc_RNA MGP_WSBEiJ_T0085891.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138699632 138796348 - MGP_WSBEiJ_P0085891 D7Ertd443e protein_coding unknown_likely_coding MGP_WSBEiJ_T0085892.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138699633 138815753 - MGP_WSBEiJ_P0085892 D7Ertd443e protein_coding protein_coding MGP_WSBEiJ_T0085893.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138700101 138803786 - MGP_WSBEiJ_P0085893 D7Ertd443e protein_coding protein_coding MGP_WSBEiJ_T0085894.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138700114 138779087 - MGP_WSBEiJ_P0085894 D7Ertd443e protein_coding protein_coding MGP_WSBEiJ_T0085895.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138700653 138702713 - D7Ertd443e protein_coding retained_intron MGP_WSBEiJ_T0085896.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138700653 138786021 - MGP_WSBEiJ_P0085896 D7Ertd443e protein_coding protein_coding MGP_WSBEiJ_T0085897.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138786657 138815756 - MGP_WSBEiJ_P0085897 D7Ertd443e protein_coding protein_coding MGP_WSBEiJ_T0085898.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138786778 138815750 - MGP_WSBEiJ_P0085898 D7Ertd443e protein_coding protein_coding MGP_WSBEiJ_T0085899.1 MGP_WSBEiJ_G0032266.1 mouse_genomes_project 7 138792326 138824586 - D7Ertd443e protein_coding processed_transcript MGP_WSBEiJ_T0084172.1 MGP_WSBEiJ_G0031826.1 mouse_genomes_project 7 106752936 106753872 - MGP_WSBEiJ_P0084172 Olfr66 protein_coding protein_coding MGP_WSBEiJ_T0085356.1 MGP_WSBEiJ_G0032161.1 mouse_genomes_project 7 131195517 131202292 - MGP_WSBEiJ_P0085356 Spn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085357.1 MGP_WSBEiJ_G0032161.1 mouse_genomes_project 7 131196747 131201071 - MGP_WSBEiJ_P0085357 Spn protein_coding protein_coding MGP_WSBEiJ_T0085358.1 MGP_WSBEiJ_G0032161.1 mouse_genomes_project 7 131196979 131202301 - MGP_WSBEiJ_P0085358 Spn protein_coding protein_coding MGP_WSBEiJ_T0084648.1 MGP_WSBEiJ_G0032024.1 mouse_genomes_project 7 118192970 118197680 + MGP_WSBEiJ_P0084648 Calcb protein_coding protein_coding MGP_WSBEiJ_T0084649.1 MGP_WSBEiJ_G0032024.1 mouse_genomes_project 7 118193002 118197378 + MGP_WSBEiJ_P0084649 Calcb protein_coding protein_coding MGP_WSBEiJ_T0084650.1 MGP_WSBEiJ_G0032024.1 mouse_genomes_project 7 118193838 118194467 + MGP_WSBEiJ_P0084650 Calcb protein_coding protein_coding MGP_WSBEiJ_T0081930.1 MGP_WSBEiJ_G0031231.1 mouse_genomes_project 7 34463315 34465948 + MGP_WSBEiJ_P0081930 Cebpa protein_coding protein_coding MGP_WSBEiJ_T0081931.1 MGP_WSBEiJ_G0031231.1 mouse_genomes_project 7 34463325 34465948 + MGP_WSBEiJ_P0081931 Cebpa protein_coding protein_coding MGP_WSBEiJ_T0097092.1 MGP_WSBEiJ_G0035773.1 mouse_genomes_project 7 14103781 14103900 + n-R5s151 rRNA rRNA MGP_WSBEiJ_T0082202.1 MGP_WSBEiJ_G0031309.1 mouse_genomes_project 7 44528768 44532985 - MGP_WSBEiJ_P0082202 Clec11a protein_coding protein_coding MGP_WSBEiJ_T0008704.1 MGP_WSBEiJ_G0007042.1 mouse_genomes_project 7 39157588 39167104 + Gm37494 lincRNA lincRNA MGP_WSBEiJ_T0008705.1 MGP_WSBEiJ_G0007042.1 mouse_genomes_project 7 39166271 39167502 + Gm37494 lincRNA lincRNA MGP_WSBEiJ_T0008706.1 MGP_WSBEiJ_G0007042.1 mouse_genomes_project 7 39166272 39196177 + Gm37494 lincRNA lincRNA MGP_WSBEiJ_T0008707.1 MGP_WSBEiJ_G0007042.1 mouse_genomes_project 7 39166296 39179859 + Gm37494 lincRNA lincRNA MGP_WSBEiJ_T0085120.1 MGP_WSBEiJ_G0032123.1 mouse_genomes_project 7 130517007 130528784 - MGP_WSBEiJ_P0085120 Atxn2l protein_coding protein_coding MGP_WSBEiJ_T0085121.1 MGP_WSBEiJ_G0032123.1 mouse_genomes_project 7 130517014 130527761 - MGP_WSBEiJ_P0085121 Atxn2l protein_coding protein_coding MGP_WSBEiJ_T0085122.1 MGP_WSBEiJ_G0032123.1 mouse_genomes_project 7 130517085 130528702 - MGP_WSBEiJ_P0085122 Atxn2l protein_coding protein_coding MGP_WSBEiJ_T0085123.1 MGP_WSBEiJ_G0032123.1 mouse_genomes_project 7 130517451 130518675 - MGP_WSBEiJ_P0085123 Atxn2l protein_coding protein_coding MGP_WSBEiJ_T0085124.1 MGP_WSBEiJ_G0032123.1 mouse_genomes_project 7 130518261 130527665 - MGP_WSBEiJ_P0085124 Atxn2l protein_coding protein_coding MGP_WSBEiJ_T0085125.1 MGP_WSBEiJ_G0032123.1 mouse_genomes_project 7 130524497 130527447 - MGP_WSBEiJ_P0085125 Atxn2l protein_coding protein_coding MGP_WSBEiJ_T0080234.1 MGP_WSBEiJ_G0030772.1 mouse_genomes_project 7 3842481 3869261 - MGP_WSBEiJ_P0080234 Zim1 protein_coding protein_coding MGP_WSBEiJ_T0080235.1 MGP_WSBEiJ_G0030772.1 mouse_genomes_project 7 3847718 3869240 - MGP_WSBEiJ_P0080235 Zim1 protein_coding protein_coding MGP_WSBEiJ_T0080236.1 MGP_WSBEiJ_G0030772.1 mouse_genomes_project 7 3848634 3860382 - MGP_WSBEiJ_P0080236 Zim1 protein_coding protein_coding MGP_WSBEiJ_T0086096.1 MGP_WSBEiJ_G0032337.1 mouse_genomes_project 7 145677811 145679315 - MGP_WSBEiJ_P0086096 Cox8b protein_coding protein_coding MGP_WSBEiJ_T0015262.1 MGP_WSBEiJ_G0013392.1 mouse_genomes_project 7 25644320 25644563 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002258.1 MGP_WSBEiJ_G0002176.1 mouse_genomes_project 7 126855882 126856875 - TEC TEC MGP_WSBEiJ_T0080168.1 MGP_WSBEiJ_G0030739.1 mouse_genomes_project 7 1981845 1985598 + MGP_WSBEiJ_P0080168 protein_coding protein_coding MGP_WSBEiJ_T0085849.1 MGP_WSBEiJ_G0032258.1 mouse_genomes_project 7 137993341 138009907 - MGP_WSBEiJ_P0085849 Tex36 protein_coding protein_coding MGP_WSBEiJ_T0080247.1 MGP_WSBEiJ_G0030777.1 mouse_genomes_project 7 4351255 4363452 + MGP_WSBEiJ_P0080247 Zfp418 protein_coding protein_coding MGP_WSBEiJ_T0098507.1 MGP_WSBEiJ_G0037170.1 mouse_genomes_project 7 120270571 120270678 - Gm25423 snRNA snRNA MGP_WSBEiJ_T0015282.1 MGP_WSBEiJ_G0013412.1 mouse_genomes_project 7 41057408 41057636 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098521.1 MGP_WSBEiJ_G0037184.1 mouse_genomes_project 7 142705378 142705485 - Gm25798 snRNA snRNA MGP_WSBEiJ_T0080774.1 MGP_WSBEiJ_G0030949.1 mouse_genomes_project 7 17947897 17948661 + MGP_WSBEiJ_P0080774 protein_coding protein_coding MGP_WSBEiJ_T0017838.1 MGP_WSBEiJ_G0015123.1 mouse_genomes_project 7 147496046 147510856 - Nctc1 processed_transcript antisense MGP_WSBEiJ_T0017839.1 MGP_WSBEiJ_G0015123.1 mouse_genomes_project 7 147505954 147510856 - Nctc1 processed_transcript retained_intron MGP_WSBEiJ_T0085919.1 MGP_WSBEiJ_G0032279.1 mouse_genomes_project 7 142816090 143000541 - MGP_WSBEiJ_P0085919 Tcerg1l protein_coding protein_coding MGP_WSBEiJ_T0085920.1 MGP_WSBEiJ_G0032279.1 mouse_genomes_project 7 142816833 142872951 - Tcerg1l protein_coding processed_transcript MGP_WSBEiJ_T0085921.1 MGP_WSBEiJ_G0032279.1 mouse_genomes_project 7 142865558 143000543 - Tcerg1l protein_coding retained_intron MGP_WSBEiJ_T0015416.1 MGP_WSBEiJ_G0013546.1 mouse_genomes_project 7 132789434 132789734 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081980.1 MGP_WSBEiJ_G0031241.1 mouse_genomes_project 7 34977171 34983758 - MGP_WSBEiJ_P0081980 Rgs9bp protein_coding protein_coding MGP_WSBEiJ_T0083238.1 MGP_WSBEiJ_G0031548.1 mouse_genomes_project 7 81326321 81347599 - MGP_WSBEiJ_P0083238 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083239.1 MGP_WSBEiJ_G0031548.1 mouse_genomes_project 7 81326329 81330025 - protein_coding retained_intron MGP_WSBEiJ_T0083240.1 MGP_WSBEiJ_G0031548.1 mouse_genomes_project 7 81326789 81352590 - MGP_WSBEiJ_P0083240 protein_coding protein_coding MGP_WSBEiJ_T0083241.1 MGP_WSBEiJ_G0031548.1 mouse_genomes_project 7 81346479 81366456 - MGP_WSBEiJ_P0083241 protein_coding protein_coding MGP_WSBEiJ_T0083242.1 MGP_WSBEiJ_G0031548.1 mouse_genomes_project 7 81347037 81352600 - protein_coding processed_transcript MGP_WSBEiJ_T0081632.1 MGP_WSBEiJ_G0031175.1 mouse_genomes_project 7 29395746 29397860 - MGP_WSBEiJ_P0081632 Psenen protein_coding protein_coding MGP_WSBEiJ_T0005556.1 MGP_WSBEiJ_G0004674.1 mouse_genomes_project 7 66768492 66769479 - Gm20684 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0083236.1 MGP_WSBEiJ_G0031546.1 mouse_genomes_project 7 81296912 81298460 - MGP_WSBEiJ_P0083236 Mesp1 protein_coding protein_coding MGP_WSBEiJ_T0010717.1 MGP_WSBEiJ_G0008874.1 mouse_genomes_project 7 67323211 67323269 - Mir7057 miRNA miRNA MGP_WSBEiJ_T0008674.1 MGP_WSBEiJ_G0007013.1 mouse_genomes_project 7 23918428 23928317 + Gm44880 lincRNA lincRNA MGP_WSBEiJ_T0002184.1 MGP_WSBEiJ_G0002103.1 mouse_genomes_project 7 49906990 49910570 + TEC TEC MGP_WSBEiJ_T0084336.1 MGP_WSBEiJ_G0031903.1 mouse_genomes_project 7 108625877 108631535 - MGP_WSBEiJ_P0084336 Rrp8 protein_coding protein_coding MGP_WSBEiJ_T0084337.1 MGP_WSBEiJ_G0031903.1 mouse_genomes_project 7 108626074 108632130 - MGP_WSBEiJ_P0084337 Rrp8 protein_coding protein_coding MGP_WSBEiJ_T0084338.1 MGP_WSBEiJ_G0031903.1 mouse_genomes_project 7 108626310 108627352 - Rrp8 protein_coding retained_intron MGP_WSBEiJ_T0084339.1 MGP_WSBEiJ_G0031903.1 mouse_genomes_project 7 108626676 108627734 - Rrp8 protein_coding processed_transcript MGP_WSBEiJ_T0084340.1 MGP_WSBEiJ_G0031903.1 mouse_genomes_project 7 108626676 108627617 - Rrp8 protein_coding retained_intron MGP_WSBEiJ_T0084341.1 MGP_WSBEiJ_G0031903.1 mouse_genomes_project 7 108628362 108631127 - Rrp8 protein_coding processed_transcript MGP_WSBEiJ_T0008775.1 MGP_WSBEiJ_G0007093.1 mouse_genomes_project 7 74906682 74907239 - lincRNA lincRNA MGP_WSBEiJ_T0010735.1 MGP_WSBEiJ_G0008892.1 mouse_genomes_project 7 118672714 118672794 + Gm27684 miRNA miRNA MGP_WSBEiJ_T0083220.1 MGP_WSBEiJ_G0031542.1 mouse_genomes_project 7 81196752 81214468 - MGP_WSBEiJ_P0083220 Kif7 protein_coding protein_coding MGP_WSBEiJ_T0083221.1 MGP_WSBEiJ_G0031542.1 mouse_genomes_project 7 81196753 81212835 - MGP_WSBEiJ_P0083221 Kif7 protein_coding protein_coding MGP_WSBEiJ_T0083222.1 MGP_WSBEiJ_G0031542.1 mouse_genomes_project 7 81196753 81212835 - MGP_WSBEiJ_P0083222 Kif7 protein_coding protein_coding MGP_WSBEiJ_T0083223.1 MGP_WSBEiJ_G0031542.1 mouse_genomes_project 7 81197176 81214417 - MGP_WSBEiJ_P0083223 Kif7 protein_coding protein_coding MGP_WSBEiJ_T0010666.1 MGP_WSBEiJ_G0008823.1 mouse_genomes_project 7 23227402 23227466 - Mir7047 miRNA miRNA MGP_WSBEiJ_T0015414.1 MGP_WSBEiJ_G0013544.1 mouse_genomes_project 7 132303943 132304843 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002218.1 MGP_WSBEiJ_G0002136.1 mouse_genomes_project 7 76884336 76887976 + TEC TEC MGP_WSBEiJ_T0081019.1 MGP_WSBEiJ_G0031019.1 mouse_genomes_project 7 23963012 23964788 + MGP_WSBEiJ_P0081019 B3gnt8 protein_coding protein_coding MGP_WSBEiJ_T0081020.1 MGP_WSBEiJ_G0031019.1 mouse_genomes_project 7 23963999 23971463 + MGP_WSBEiJ_P0081020 B3gnt8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081021.1 MGP_WSBEiJ_G0031019.1 mouse_genomes_project 7 23964000 23965855 + MGP_WSBEiJ_P0081021 B3gnt8 protein_coding protein_coding MGP_WSBEiJ_T0081022.1 MGP_WSBEiJ_G0031019.1 mouse_genomes_project 7 23964004 23965848 + B3gnt8 protein_coding retained_intron MGP_WSBEiJ_T0083235.1 MGP_WSBEiJ_G0031545.1 mouse_genomes_project 7 81245539 81289837 + MGP_WSBEiJ_P0083235 Wdr93 protein_coding unknown_likely_coding MGP_WSBEiJ_T0008696.1 MGP_WSBEiJ_G0007034.1 mouse_genomes_project 7 36030926 36034669 + Gm29129 lincRNA lincRNA MGP_WSBEiJ_T0010660.1 MGP_WSBEiJ_G0008817.1 mouse_genomes_project 7 16996306 16996371 + Mir3100 miRNA miRNA MGP_WSBEiJ_T0082209.1 MGP_WSBEiJ_G0031311.1 mouse_genomes_project 7 44587163 44603941 - MGP_WSBEiJ_P0082209 1700008O03Rik protein_coding protein_coding MGP_WSBEiJ_T0082210.1 MGP_WSBEiJ_G0031311.1 mouse_genomes_project 7 44587219 44603425 - 1700008O03Rik protein_coding retained_intron MGP_WSBEiJ_T0082211.1 MGP_WSBEiJ_G0031311.1 mouse_genomes_project 7 44587357 44602511 - MGP_WSBEiJ_P0082211 1700008O03Rik protein_coding protein_coding MGP_WSBEiJ_T0082212.1 MGP_WSBEiJ_G0031311.1 mouse_genomes_project 7 44589781 44616888 - 1700008O03Rik protein_coding processed_transcript MGP_WSBEiJ_T0082213.1 MGP_WSBEiJ_G0031311.1 mouse_genomes_project 7 44610091 44617024 - 1700008O03Rik protein_coding processed_transcript MGP_WSBEiJ_T0101075.1 MGP_WSBEiJ_G0039532.1 mouse_genomes_project 7 87036903 87037773 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0086550.1 MGP_WSBEiJ_G0032425.1 mouse_genomes_project 7 149935250 149939148 + MGP_WSBEiJ_P0086550 Fgf4 protein_coding protein_coding MGP_WSBEiJ_T0015202.1 MGP_WSBEiJ_G0013332.1 mouse_genomes_project 7 879052 879884 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085477.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131726980 131734373 - MGP_WSBEiJ_P0085477 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0085478.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131726980 131735212 - MGP_WSBEiJ_P0085478 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0085479.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131726980 131735155 - MGP_WSBEiJ_P0085479 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0085480.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131728404 131734807 - MGP_WSBEiJ_P0085480 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0085481.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131728536 131735198 - MGP_WSBEiJ_P0085481 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0085482.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131728705 131735737 - MGP_WSBEiJ_P0085482 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0085483.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131731853 131734300 - MGP_WSBEiJ_P0085483 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0085484.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131731933 131735140 - MGP_WSBEiJ_P0085484 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0085485.1 MGP_WSBEiJ_G0032186.1 mouse_genomes_project 7 131732000 131734305 - MGP_WSBEiJ_P0085485 Zfp629 protein_coding protein_coding MGP_WSBEiJ_T0080281.1 MGP_WSBEiJ_G0030801.1 mouse_genomes_project 7 9765483 9802142 + MGP_WSBEiJ_P0080281 2900092C05Rik protein_coding protein_coding MGP_WSBEiJ_T0084572.1 MGP_WSBEiJ_G0032005.1 mouse_genomes_project 7 115398279 115489715 + MGP_WSBEiJ_P0084572 Usp47 protein_coding protein_coding MGP_WSBEiJ_T0084573.1 MGP_WSBEiJ_G0032005.1 mouse_genomes_project 7 115398481 115489720 + MGP_WSBEiJ_P0084573 Usp47 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099703.1 MGP_WSBEiJ_G0038366.1 mouse_genomes_project 7 34280181 34280311 - Gm25922 snoRNA snoRNA MGP_WSBEiJ_T0081321.1 MGP_WSBEiJ_G0031102.1 mouse_genomes_project 7 27365134 27373810 + MGP_WSBEiJ_P0081321 Fbxo27 protein_coding protein_coding MGP_WSBEiJ_T0081322.1 MGP_WSBEiJ_G0031102.1 mouse_genomes_project 7 27365325 27365801 + MGP_WSBEiJ_P0081322 Fbxo27 protein_coding protein_coding MGP_WSBEiJ_T0081323.1 MGP_WSBEiJ_G0031102.1 mouse_genomes_project 7 27365582 27373814 + MGP_WSBEiJ_P0081323 Fbxo27 protein_coding protein_coding MGP_WSBEiJ_T0081324.1 MGP_WSBEiJ_G0031102.1 mouse_genomes_project 7 27371120 27372430 + Fbxo27 protein_coding processed_transcript MGP_WSBEiJ_T0083785.1 MGP_WSBEiJ_G0031687.1 mouse_genomes_project 7 101366934 101378385 + MGP_WSBEiJ_P0083785 Wnt11 protein_coding protein_coding MGP_WSBEiJ_T0083786.1 MGP_WSBEiJ_G0031687.1 mouse_genomes_project 7 101366934 101385587 + MGP_WSBEiJ_P0083786 Wnt11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083787.1 MGP_WSBEiJ_G0031687.1 mouse_genomes_project 7 101366953 101386987 + MGP_WSBEiJ_P0083787 Wnt11 protein_coding protein_coding MGP_WSBEiJ_T0083788.1 MGP_WSBEiJ_G0031687.1 mouse_genomes_project 7 101370657 101385527 + MGP_WSBEiJ_P0083788 Wnt11 protein_coding protein_coding MGP_WSBEiJ_T0083789.1 MGP_WSBEiJ_G0031687.1 mouse_genomes_project 7 101370710 101385345 + MGP_WSBEiJ_P0083789 Wnt11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086490.1 MGP_WSBEiJ_G0032413.1 mouse_genomes_project 7 148714530 148720329 - Osbpl5 protein_coding retained_intron MGP_WSBEiJ_T0086491.1 MGP_WSBEiJ_G0032413.1 mouse_genomes_project 7 148714530 148767296 - MGP_WSBEiJ_P0086491 Osbpl5 protein_coding protein_coding MGP_WSBEiJ_T0086492.1 MGP_WSBEiJ_G0032413.1 mouse_genomes_project 7 148714530 148768918 - MGP_WSBEiJ_P0086492 Osbpl5 protein_coding protein_coding MGP_WSBEiJ_T0086493.1 MGP_WSBEiJ_G0032413.1 mouse_genomes_project 7 148720031 148720854 - Osbpl5 protein_coding retained_intron MGP_WSBEiJ_T0086494.1 MGP_WSBEiJ_G0032413.1 mouse_genomes_project 7 148729981 148732046 - Osbpl5 protein_coding retained_intron MGP_WSBEiJ_T0086495.1 MGP_WSBEiJ_G0032413.1 mouse_genomes_project 7 148735977 148785163 - MGP_WSBEiJ_P0086495 Osbpl5 protein_coding protein_coding MGP_WSBEiJ_T0086496.1 MGP_WSBEiJ_G0032413.1 mouse_genomes_project 7 148740430 148767254 - Osbpl5 protein_coding processed_transcript MGP_WSBEiJ_T0005167.1 MGP_WSBEiJ_G0004390.1 mouse_genomes_project 7 85441194 85442583 + 2310044K18Rik antisense antisense MGP_WSBEiJ_T0101052.1 MGP_WSBEiJ_G0039509.1 mouse_genomes_project 7 48126737 48742537 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099729.1 MGP_WSBEiJ_G0038392.1 mouse_genomes_project 7 83666064 83666189 + Gm25907 snoRNA snoRNA MGP_WSBEiJ_T0010695.1 MGP_WSBEiJ_G0008852.1 mouse_genomes_project 7 62451958 62452037 - Gm25533 miRNA miRNA MGP_WSBEiJ_T0083186.1 MGP_WSBEiJ_G0031538.1 mouse_genomes_project 7 80874123 80883955 + MGP_WSBEiJ_P0083186 Fanci protein_coding protein_coding MGP_WSBEiJ_T0083187.1 MGP_WSBEiJ_G0031538.1 mouse_genomes_project 7 80874482 80891644 + MGP_WSBEiJ_P0083187 Fanci protein_coding protein_coding MGP_WSBEiJ_T0083188.1 MGP_WSBEiJ_G0031538.1 mouse_genomes_project 7 80874486 80933078 + MGP_WSBEiJ_P0083188 Fanci protein_coding protein_coding MGP_WSBEiJ_T0083189.1 MGP_WSBEiJ_G0031538.1 mouse_genomes_project 7 80874527 80933078 + MGP_WSBEiJ_P0083189 Fanci protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083190.1 MGP_WSBEiJ_G0031538.1 mouse_genomes_project 7 80881204 80917710 + MGP_WSBEiJ_P0083190 Fanci protein_coding protein_coding MGP_WSBEiJ_T0083191.1 MGP_WSBEiJ_G0031538.1 mouse_genomes_project 7 80894769 80909253 + MGP_WSBEiJ_P0083191 Fanci protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083192.1 MGP_WSBEiJ_G0031538.1 mouse_genomes_project 7 80923504 80928540 + MGP_WSBEiJ_P0083192 Fanci protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0015290.1 MGP_WSBEiJ_G0013420.1 mouse_genomes_project 7 42425492 42425974 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005240.1 MGP_WSBEiJ_G0004441.1 mouse_genomes_project 7 149414955 149454704 - Gm14372 antisense antisense MGP_WSBEiJ_T0015210.1 MGP_WSBEiJ_G0013340.1 mouse_genomes_project 7 1320135 1320799 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008898.1 MGP_WSBEiJ_G0007168.1 mouse_genomes_project 7 134795035 134798319 + lincRNA lincRNA MGP_WSBEiJ_T0098475.1 MGP_WSBEiJ_G0037138.1 mouse_genomes_project 7 39249170 39249281 + Gm26327 snRNA snRNA MGP_WSBEiJ_T0005180.1 MGP_WSBEiJ_G0004399.1 mouse_genomes_project 7 100126604 100175085 - Rsf1os2 antisense antisense MGP_WSBEiJ_T0005181.1 MGP_WSBEiJ_G0004399.1 mouse_genomes_project 7 100171964 100175163 - Rsf1os2 antisense antisense MGP_WSBEiJ_T0005182.1 MGP_WSBEiJ_G0004399.1 mouse_genomes_project 7 100174424 100175370 - Rsf1os2 antisense antisense MGP_WSBEiJ_T0100962.1 MGP_WSBEiJ_G0039419.1 mouse_genomes_project 7 7772123 7773002 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008829.1 MGP_WSBEiJ_G0007126.1 mouse_genomes_project 7 102206611 102209809 + Gm10605 lincRNA lincRNA MGP_WSBEiJ_T0008830.1 MGP_WSBEiJ_G0007126.1 mouse_genomes_project 7 102206814 102212374 + Gm10605 lincRNA lincRNA MGP_WSBEiJ_T0084503.1 MGP_WSBEiJ_G0031992.1 mouse_genomes_project 7 113354201 113358694 - MGP_WSBEiJ_P0084503 protein_coding protein_coding MGP_WSBEiJ_T0084298.1 MGP_WSBEiJ_G0031898.1 mouse_genomes_project 7 108482459 108491296 - MGP_WSBEiJ_P0084298 Hpx protein_coding protein_coding MGP_WSBEiJ_T0015362.1 MGP_WSBEiJ_G0013492.1 mouse_genomes_project 7 97895405 97896853 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084476.1 MGP_WSBEiJ_G0031984.1 mouse_genomes_project 7 112977578 112989684 - MGP_WSBEiJ_P0084476 BC051019 protein_coding protein_coding MGP_WSBEiJ_T0084477.1 MGP_WSBEiJ_G0031984.1 mouse_genomes_project 7 112977581 112989748 - MGP_WSBEiJ_P0084477 BC051019 protein_coding protein_coding MGP_WSBEiJ_T0084478.1 MGP_WSBEiJ_G0031984.1 mouse_genomes_project 7 112981305 112986914 - MGP_WSBEiJ_P0084478 BC051019 protein_coding protein_coding MGP_WSBEiJ_T0084454.1 MGP_WSBEiJ_G0031978.1 mouse_genomes_project 7 112365176 112400523 - MGP_WSBEiJ_P0084454 Lmo1 protein_coding protein_coding MGP_WSBEiJ_T0082368.1 MGP_WSBEiJ_G0031342.1 mouse_genomes_project 7 45266649 45277123 - MGP_WSBEiJ_P0082368 protein_coding protein_coding MGP_WSBEiJ_T0082920.1 MGP_WSBEiJ_G0031489.1 mouse_genomes_project 7 65286033 65292181 + Mcee protein_coding processed_transcript MGP_WSBEiJ_T0082921.1 MGP_WSBEiJ_G0031489.1 mouse_genomes_project 7 65286070 65311395 + MGP_WSBEiJ_P0082921 Mcee protein_coding protein_coding MGP_WSBEiJ_T0082922.1 MGP_WSBEiJ_G0031489.1 mouse_genomes_project 7 65286165 65311391 + MGP_WSBEiJ_P0082922 Mcee protein_coding protein_coding MGP_WSBEiJ_T0082923.1 MGP_WSBEiJ_G0031489.1 mouse_genomes_project 7 65286200 65311391 + MGP_WSBEiJ_P0082923 Mcee protein_coding protein_coding MGP_WSBEiJ_T0085743.1 MGP_WSBEiJ_G0032232.1 mouse_genomes_project 7 135044875 135103175 + MGP_WSBEiJ_P0085743 Btbd16 protein_coding protein_coding MGP_WSBEiJ_T0080468.1 MGP_WSBEiJ_G0030860.1 mouse_genomes_project 7 14085927 14109322 - MGP_WSBEiJ_P0080468 Npas1 protein_coding protein_coding MGP_WSBEiJ_T0084480.1 MGP_WSBEiJ_G0031986.1 mouse_genomes_project 7 113003162 113020412 - MGP_WSBEiJ_P0084480 Tmem9b protein_coding protein_coding MGP_WSBEiJ_T0084481.1 MGP_WSBEiJ_G0031986.1 mouse_genomes_project 7 113013513 113020401 - MGP_WSBEiJ_P0084481 Tmem9b protein_coding protein_coding MGP_WSBEiJ_T0082886.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65033128 65160830 + MGP_WSBEiJ_P0082886 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082887.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65033138 65160187 + MGP_WSBEiJ_P0082887 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082888.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65033138 65113294 + MGP_WSBEiJ_P0082888 Trpm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082889.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65033221 65160187 + MGP_WSBEiJ_P0082889 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082890.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067592 65098060 + Trpm1 protein_coding retained_intron MGP_WSBEiJ_T0082891.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067670 65084506 + Trpm1 protein_coding processed_transcript MGP_WSBEiJ_T0082892.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067670 65111355 + MGP_WSBEiJ_P0082892 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082893.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067761 65111283 + Trpm1 protein_coding retained_intron MGP_WSBEiJ_T0082894.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067763 65160812 + MGP_WSBEiJ_P0082894 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082895.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067764 65087174 + MGP_WSBEiJ_P0082895 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082896.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067766 65105254 + MGP_WSBEiJ_P0082896 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082897.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067795 65105254 + MGP_WSBEiJ_P0082897 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082898.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65067812 65087147 + MGP_WSBEiJ_P0082898 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082899.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65084484 65087290 + MGP_WSBEiJ_P0082899 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082900.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65088266 65097519 + Trpm1 protein_coding processed_transcript MGP_WSBEiJ_T0082901.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65088266 65094959 + MGP_WSBEiJ_P0082901 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082902.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65096652 65106875 + Trpm1 protein_coding retained_intron MGP_WSBEiJ_T0082903.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65097538 65110279 + MGP_WSBEiJ_P0082903 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0082904.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65106393 65109742 + Trpm1 protein_coding retained_intron MGP_WSBEiJ_T0082905.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65113135 65132351 + Trpm1 protein_coding retained_intron MGP_WSBEiJ_T0082906.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65113502 65119297 + Trpm1 protein_coding processed_transcript MGP_WSBEiJ_T0082907.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65134578 65159195 + Trpm1 protein_coding retained_intron MGP_WSBEiJ_T0082908.1 MGP_WSBEiJ_G0031485.1 mouse_genomes_project 7 65134791 65159075 + MGP_WSBEiJ_P0082908 Trpm1 protein_coding protein_coding MGP_WSBEiJ_T0101024.1 MGP_WSBEiJ_G0039481.1 mouse_genomes_project 7 33128154 33128992 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015423.1 MGP_WSBEiJ_G0013553.1 mouse_genomes_project 7 143535238 143536165 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082713.1 MGP_WSBEiJ_G0031441.1 mouse_genomes_project 7 49203936 49219265 - MGP_WSBEiJ_P0082713 Mrgprx2 protein_coding protein_coding MGP_WSBEiJ_T0082714.1 MGP_WSBEiJ_G0031441.1 mouse_genomes_project 7 49205939 49216068 - MGP_WSBEiJ_P0082714 Mrgprx2 protein_coding protein_coding MGP_WSBEiJ_T0080778.1 MGP_WSBEiJ_G0030953.1 mouse_genomes_project 7 21462786 21528233 + MGP_WSBEiJ_P0080778 protein_coding protein_coding MGP_WSBEiJ_T0080779.1 MGP_WSBEiJ_G0030953.1 mouse_genomes_project 7 21462798 21528234 + MGP_WSBEiJ_P0080779 protein_coding protein_coding MGP_WSBEiJ_T0080780.1 MGP_WSBEiJ_G0030953.1 mouse_genomes_project 7 21484387 21528234 + MGP_WSBEiJ_P0080780 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080781.1 MGP_WSBEiJ_G0030953.1 mouse_genomes_project 7 21484387 21528234 + MGP_WSBEiJ_P0080781 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080782.1 MGP_WSBEiJ_G0030953.1 mouse_genomes_project 7 21484387 21528234 + MGP_WSBEiJ_P0080782 protein_coding protein_coding MGP_WSBEiJ_T0081118.1 MGP_WSBEiJ_G0031048.1 mouse_genomes_project 7 25666000 25678617 - MGP_WSBEiJ_P0081118 Gm21983 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085684.1 MGP_WSBEiJ_G0032225.1 mouse_genomes_project 7 132942087 132983052 + MGP_WSBEiJ_P0085684 Sec23ip protein_coding protein_coding MGP_WSBEiJ_T0085685.1 MGP_WSBEiJ_G0032225.1 mouse_genomes_project 7 132942121 132946723 + Sec23ip protein_coding retained_intron MGP_WSBEiJ_T0085686.1 MGP_WSBEiJ_G0032225.1 mouse_genomes_project 7 132942179 132951281 + MGP_WSBEiJ_P0085686 Sec23ip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085687.1 MGP_WSBEiJ_G0032225.1 mouse_genomes_project 7 132942564 132947521 + MGP_WSBEiJ_P0085687 Sec23ip protein_coding protein_coding MGP_WSBEiJ_T0082621.1 MGP_WSBEiJ_G0031412.1 mouse_genomes_project 7 46496729 46574753 - MGP_WSBEiJ_P0082621 Abcc8 protein_coding protein_coding MGP_WSBEiJ_T0082622.1 MGP_WSBEiJ_G0031412.1 mouse_genomes_project 7 46496730 46574669 - MGP_WSBEiJ_P0082622 Abcc8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082115.1 MGP_WSBEiJ_G0031276.1 mouse_genomes_project 7 43612599 43631914 + MGP_WSBEiJ_P0082115 Gm45233 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082117.1 MGP_WSBEiJ_G0031276.1 mouse_genomes_project 7 43612602 43631997 + MGP_WSBEiJ_P0082117 Gm45233 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081139.1 MGP_WSBEiJ_G0031052.1 mouse_genomes_project 7 25709074 25732475 - MGP_WSBEiJ_P0081139 Itpkc protein_coding protein_coding MGP_WSBEiJ_T0081140.1 MGP_WSBEiJ_G0031052.1 mouse_genomes_project 7 25709872 25714955 - Itpkc protein_coding processed_transcript MGP_WSBEiJ_T0081141.1 MGP_WSBEiJ_G0031052.1 mouse_genomes_project 7 25714467 25716357 - Itpkc protein_coding retained_intron MGP_WSBEiJ_T0081142.1 MGP_WSBEiJ_G0031052.1 mouse_genomes_project 7 25729603 25732508 - Itpkc protein_coding retained_intron MGP_WSBEiJ_T0084144.1 MGP_WSBEiJ_G0031798.1 mouse_genomes_project 7 106245158 106246118 + MGP_WSBEiJ_P0084144 Olfr606 protein_coding protein_coding MGP_WSBEiJ_T0084438.1 MGP_WSBEiJ_G0031971.1 mouse_genomes_project 7 112090573 112091628 - MGP_WSBEiJ_P0084438 Olfr517 protein_coding protein_coding MGP_WSBEiJ_T0081527.1 MGP_WSBEiJ_G0031149.1 mouse_genomes_project 7 28966292 28976223 - MGP_WSBEiJ_P0081527 Zfp146 protein_coding protein_coding MGP_WSBEiJ_T0081528.1 MGP_WSBEiJ_G0031149.1 mouse_genomes_project 7 28967744 28968394 - Zfp146 protein_coding processed_transcript MGP_WSBEiJ_T0083792.1 MGP_WSBEiJ_G0031690.1 mouse_genomes_project 7 101765396 101784927 - MGP_WSBEiJ_P0083792 Mogat2 protein_coding protein_coding MGP_WSBEiJ_T0083793.1 MGP_WSBEiJ_G0031690.1 mouse_genomes_project 7 101772889 101784902 - Mogat2 protein_coding processed_transcript MGP_WSBEiJ_T0083256.1 MGP_WSBEiJ_G0031553.1 mouse_genomes_project 7 81747503 81790857 + MGP_WSBEiJ_P0083256 Sema4b protein_coding protein_coding MGP_WSBEiJ_T0083257.1 MGP_WSBEiJ_G0031553.1 mouse_genomes_project 7 81747540 81784896 + Sema4b protein_coding retained_intron MGP_WSBEiJ_T0083258.1 MGP_WSBEiJ_G0031553.1 mouse_genomes_project 7 81760811 81790741 + MGP_WSBEiJ_P0083258 Sema4b protein_coding protein_coding MGP_WSBEiJ_T0083259.1 MGP_WSBEiJ_G0031553.1 mouse_genomes_project 7 81760906 81777120 + Sema4b protein_coding retained_intron MGP_WSBEiJ_T0081440.1 MGP_WSBEiJ_G0031127.1 mouse_genomes_project 7 27991807 27993672 - MGP_WSBEiJ_P0081440 2200002D01Rik protein_coding protein_coding MGP_WSBEiJ_T0081441.1 MGP_WSBEiJ_G0031127.1 mouse_genomes_project 7 27992820 27993578 - 2200002D01Rik protein_coding retained_intron MGP_WSBEiJ_T0002226.1 MGP_WSBEiJ_G0002144.1 mouse_genomes_project 7 80223123 80224200 - TEC TEC MGP_WSBEiJ_T0086486.1 MGP_WSBEiJ_G0032410.1 mouse_genomes_project 7 148620912 148641621 - MGP_WSBEiJ_P0086486 Tnfrsf26 protein_coding protein_coding MGP_WSBEiJ_T0082480.1 MGP_WSBEiJ_G0031376.1 mouse_genomes_project 7 45801040 45807336 - MGP_WSBEiJ_P0082480 Bax protein_coding protein_coding MGP_WSBEiJ_T0008776.1 MGP_WSBEiJ_G0007094.1 mouse_genomes_project 7 75027938 75064424 - Gm10619 lincRNA lincRNA MGP_WSBEiJ_T0008777.1 MGP_WSBEiJ_G0007094.1 mouse_genomes_project 7 75056213 75064496 - Gm10619 lincRNA lincRNA MGP_WSBEiJ_T0083988.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104601964 104614263 - MGP_WSBEiJ_P0083988 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083989.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104601964 104610992 - MGP_WSBEiJ_P0083989 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083990.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104601964 104607724 - MGP_WSBEiJ_P0083990 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083991.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104601964 104614361 - MGP_WSBEiJ_P0083991 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083992.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104601964 104614287 - MGP_WSBEiJ_P0083992 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083993.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104601964 104614368 - MGP_WSBEiJ_P0083993 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083994.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104602752 104613131 - MGP_WSBEiJ_P0083994 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083995.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104602762 104614294 - MGP_WSBEiJ_P0083995 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083996.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104602821 104614366 - MGP_WSBEiJ_P0083996 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083997.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104603054 104612904 - MGP_WSBEiJ_P0083997 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083998.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104607501 104614368 - MGP_WSBEiJ_P0083998 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0083999.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104607503 104612598 - MGP_WSBEiJ_P0083999 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0084000.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104607506 104614367 - MGP_WSBEiJ_P0084000 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0084001.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104607539 104612247 - MGP_WSBEiJ_P0084001 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0084002.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104607578 104612902 - MGP_WSBEiJ_P0084002 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0084003.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104607656 104614164 - MGP_WSBEiJ_P0084003 Folr1 protein_coding protein_coding MGP_WSBEiJ_T0084004.1 MGP_WSBEiJ_G0031734.1 mouse_genomes_project 7 104612044 104613681 - Folr1 protein_coding processed_transcript MGP_WSBEiJ_T0002217.1 MGP_WSBEiJ_G0002135.1 mouse_genomes_project 7 76813033 76814637 + TEC TEC MGP_WSBEiJ_T0085949.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143837820 143874727 + MGP_WSBEiJ_P0085949 Lrrc27 protein_coding protein_coding MGP_WSBEiJ_T0085950.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143837843 143844447 + MGP_WSBEiJ_P0085950 Lrrc27 protein_coding protein_coding MGP_WSBEiJ_T0085951.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143838104 143856410 + MGP_WSBEiJ_P0085951 Lrrc27 protein_coding protein_coding MGP_WSBEiJ_T0085952.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143839525 143848279 + MGP_WSBEiJ_P0085952 Lrrc27 protein_coding protein_coding MGP_WSBEiJ_T0085953.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143846766 143853509 + Lrrc27 protein_coding processed_transcript MGP_WSBEiJ_T0085954.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143847784 143853602 + Lrrc27 protein_coding retained_intron MGP_WSBEiJ_T0085955.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143861405 143874719 + Lrrc27 protein_coding processed_transcript MGP_WSBEiJ_T0085956.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143867593 143874720 + Lrrc27 protein_coding processed_transcript MGP_WSBEiJ_T0085957.1 MGP_WSBEiJ_G0032286.1 mouse_genomes_project 7 143870304 143874724 + Lrrc27 protein_coding processed_transcript MGP_WSBEiJ_T0097102.1 MGP_WSBEiJ_G0035783.1 mouse_genomes_project 7 120200060 120200185 - n-R5s157 rRNA rRNA MGP_WSBEiJ_T0083068.1 MGP_WSBEiJ_G0031518.1 mouse_genomes_project 7 74591554 74637331 + MGP_WSBEiJ_P0083068 Rgma protein_coding protein_coding MGP_WSBEiJ_T0083069.1 MGP_WSBEiJ_G0031518.1 mouse_genomes_project 7 74608716 74628669 + MGP_WSBEiJ_P0083069 Rgma protein_coding protein_coding MGP_WSBEiJ_T0083070.1 MGP_WSBEiJ_G0031518.1 mouse_genomes_project 7 74608833 74610809 + Rgma protein_coding retained_intron MGP_WSBEiJ_T0101038.1 MGP_WSBEiJ_G0039495.1 mouse_genomes_project 7 44189954 44234805 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015405.1 MGP_WSBEiJ_G0013535.1 mouse_genomes_project 7 130243396 130243644 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084380.1 MGP_WSBEiJ_G0031920.1 mouse_genomes_project 7 109939252 109940200 + MGP_WSBEiJ_P0084380 Olfr704 protein_coding protein_coding MGP_WSBEiJ_T0084194.1 MGP_WSBEiJ_G0031847.1 mouse_genomes_project 7 107063390 107072102 - MGP_WSBEiJ_P0084194 Olfr649 protein_coding protein_coding MGP_WSBEiJ_T0084195.1 MGP_WSBEiJ_G0031847.1 mouse_genomes_project 7 107063391 107064330 - MGP_WSBEiJ_P0084195 Olfr649 protein_coding protein_coding MGP_WSBEiJ_T0086497.1 MGP_WSBEiJ_G0032414.1 mouse_genomes_project 7 148791922 148795205 - MGP_WSBEiJ_P0086497 Mrgprg protein_coding protein_coding MGP_WSBEiJ_T0015254.1 MGP_WSBEiJ_G0013384.1 mouse_genomes_project 7 23934678 23935255 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010674.1 MGP_WSBEiJ_G0008831.1 mouse_genomes_project 7 27767969 27768035 + Gm44408 miRNA miRNA MGP_WSBEiJ_T0082529.1 MGP_WSBEiJ_G0031386.1 mouse_genomes_project 7 45978994 45985798 + MGP_WSBEiJ_P0082529 Izumo1 protein_coding protein_coding MGP_WSBEiJ_T0082530.1 MGP_WSBEiJ_G0031386.1 mouse_genomes_project 7 45981575 45987379 + Izumo1 protein_coding retained_intron MGP_WSBEiJ_T0081091.1 MGP_WSBEiJ_G0031035.1 mouse_genomes_project 7 25055217 25056050 - MGP_WSBEiJ_P0081091 protein_coding protein_coding MGP_WSBEiJ_T0086561.1 MGP_WSBEiJ_G0032430.1 mouse_genomes_project 7 150404762 150413516 + MGP_WSBEiJ_P0086561 Mrgprf protein_coding protein_coding MGP_WSBEiJ_T0086562.1 MGP_WSBEiJ_G0032430.1 mouse_genomes_project 7 150404833 150413308 + MGP_WSBEiJ_P0086562 Mrgprf protein_coding protein_coding MGP_WSBEiJ_T0085616.1 MGP_WSBEiJ_G0032214.1 mouse_genomes_project 7 132395899 132399476 - MGP_WSBEiJ_P0085616 9130023H24Rik protein_coding protein_coding MGP_WSBEiJ_T0080702.1 MGP_WSBEiJ_G0030929.1 mouse_genomes_project 7 17485134 17516347 - MGP_WSBEiJ_P0080702 Ppp1r37 protein_coding protein_coding MGP_WSBEiJ_T0084430.1 MGP_WSBEiJ_G0031963.1 mouse_genomes_project 7 111811586 111812537 + MGP_WSBEiJ_P0084430 Olfr507 protein_coding protein_coding MGP_WSBEiJ_T0081336.1 MGP_WSBEiJ_G0031107.1 mouse_genomes_project 7 27448426 27456913 - MGP_WSBEiJ_P0081336 Nfkbib protein_coding protein_coding MGP_WSBEiJ_T0081337.1 MGP_WSBEiJ_G0031107.1 mouse_genomes_project 7 27449208 27456787 - MGP_WSBEiJ_P0081337 Nfkbib protein_coding protein_coding MGP_WSBEiJ_T0081338.1 MGP_WSBEiJ_G0031107.1 mouse_genomes_project 7 27452013 27457785 - MGP_WSBEiJ_P0081338 Nfkbib protein_coding protein_coding MGP_WSBEiJ_T0015390.1 MGP_WSBEiJ_G0013520.1 mouse_genomes_project 7 113747148 113747714 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081265.1 MGP_WSBEiJ_G0031086.1 mouse_genomes_project 7 26903714 26913350 - MGP_WSBEiJ_P0081265 Dll3 protein_coding protein_coding MGP_WSBEiJ_T0081266.1 MGP_WSBEiJ_G0031086.1 mouse_genomes_project 7 26903760 26904643 - Dll3 protein_coding processed_transcript MGP_WSBEiJ_T0081267.1 MGP_WSBEiJ_G0031086.1 mouse_genomes_project 7 26909798 26912884 - Dll3 protein_coding retained_intron MGP_WSBEiJ_T0084148.1 MGP_WSBEiJ_G0031802.1 mouse_genomes_project 7 106299002 106299950 - MGP_WSBEiJ_P0084148 Olfr610 protein_coding protein_coding MGP_WSBEiJ_T0101080.1 MGP_WSBEiJ_G0039537.1 mouse_genomes_project 7 87467728 87471587 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081188.1 MGP_WSBEiJ_G0031061.1 mouse_genomes_project 7 25997752 26001345 + MGP_WSBEiJ_P0081188 Sertad3 protein_coding protein_coding MGP_WSBEiJ_T0002225.1 MGP_WSBEiJ_G0002143.1 mouse_genomes_project 7 79640916 79642006 - TEC TEC MGP_WSBEiJ_T0081673.1 MGP_WSBEiJ_G0031178.1 mouse_genomes_project 7 29404323 29425469 - MGP_WSBEiJ_P0081673 Kmt2b protein_coding protein_coding MGP_WSBEiJ_T0081674.1 MGP_WSBEiJ_G0031178.1 mouse_genomes_project 7 29404323 29425460 - MGP_WSBEiJ_P0081674 Kmt2b protein_coding protein_coding MGP_WSBEiJ_T0081675.1 MGP_WSBEiJ_G0031178.1 mouse_genomes_project 7 29404325 29422083 - MGP_WSBEiJ_P0081675 Kmt2b protein_coding protein_coding MGP_WSBEiJ_T0081676.1 MGP_WSBEiJ_G0031178.1 mouse_genomes_project 7 29405218 29406130 - Kmt2b protein_coding retained_intron MGP_WSBEiJ_T0081677.1 MGP_WSBEiJ_G0031178.1 mouse_genomes_project 7 29408633 29409639 - Kmt2b protein_coding retained_intron MGP_WSBEiJ_T0081678.1 MGP_WSBEiJ_G0031178.1 mouse_genomes_project 7 29411037 29412629 - Kmt2b protein_coding processed_transcript MGP_WSBEiJ_T0081679.1 MGP_WSBEiJ_G0031178.1 mouse_genomes_project 7 29412494 29414459 - Kmt2b protein_coding processed_transcript MGP_WSBEiJ_T0081680.1 MGP_WSBEiJ_G0031178.1 mouse_genomes_project 7 29421023 29421817 - Kmt2b protein_coding processed_transcript MGP_WSBEiJ_T0084104.1 MGP_WSBEiJ_G0031761.1 mouse_genomes_project 7 105388455 105389409 + MGP_WSBEiJ_P0084104 Olfr552 protein_coding protein_coding MGP_WSBEiJ_T0080174.1 MGP_WSBEiJ_G0030745.1 mouse_genomes_project 7 2014569 2034794 + MGP_WSBEiJ_P0080174 U2af2 protein_coding protein_coding MGP_WSBEiJ_T0080175.1 MGP_WSBEiJ_G0030745.1 mouse_genomes_project 7 2020684 2034349 + MGP_WSBEiJ_P0080175 U2af2 protein_coding protein_coding MGP_WSBEiJ_T0086004.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144782974 144790531 - MGP_WSBEiJ_P0086004 Fuom protein_coding protein_coding MGP_WSBEiJ_T0086005.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144784716 144790534 - MGP_WSBEiJ_P0086005 Fuom protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086006.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144785675 144790504 - MGP_WSBEiJ_P0086006 Fuom protein_coding protein_coding MGP_WSBEiJ_T0086007.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144785675 144790569 - MGP_WSBEiJ_P0086007 Fuom protein_coding protein_coding MGP_WSBEiJ_T0086008.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144785677 144786174 - Fuom protein_coding retained_intron MGP_WSBEiJ_T0086009.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144785679 144790448 - Fuom protein_coding processed_transcript MGP_WSBEiJ_T0086010.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144785699 144789392 - Fuom protein_coding retained_intron MGP_WSBEiJ_T0086011.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144786094 144790472 - MGP_WSBEiJ_P0086011 Fuom protein_coding protein_coding MGP_WSBEiJ_T0086012.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144788703 144790534 - MGP_WSBEiJ_P0086012 Fuom protein_coding protein_coding MGP_WSBEiJ_T0086013.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144789250 144790434 - Fuom protein_coding processed_transcript MGP_WSBEiJ_T0086014.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144789302 144790094 - Fuom protein_coding processed_transcript MGP_WSBEiJ_T0086015.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144789311 144790534 - Fuom protein_coding retained_intron MGP_WSBEiJ_T0086016.1 MGP_WSBEiJ_G0032301.1 mouse_genomes_project 7 144789426 144790458 - Fuom protein_coding retained_intron MGP_WSBEiJ_T0084224.1 MGP_WSBEiJ_G0031855.1 mouse_genomes_project 7 107195904 107209316 - MGP_WSBEiJ_P0084224 Trim30c protein_coding protein_coding MGP_WSBEiJ_T0005153.1 MGP_WSBEiJ_G0004380.1 mouse_genomes_project 7 81208931 81211004 + 9330171B17Rik antisense antisense MGP_WSBEiJ_T0005154.1 MGP_WSBEiJ_G0004380.1 mouse_genomes_project 7 81209019 81211006 + 9330171B17Rik antisense antisense MGP_WSBEiJ_T0015366.1 MGP_WSBEiJ_G0013496.1 mouse_genomes_project 7 99868635 99868822 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015353.1 MGP_WSBEiJ_G0013483.1 mouse_genomes_project 7 88391029 88391279 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005065.1 MGP_WSBEiJ_G0004317.1 mouse_genomes_project 7 1442357 1444034 + Gm15873 antisense antisense MGP_WSBEiJ_T0005066.1 MGP_WSBEiJ_G0004317.1 mouse_genomes_project 7 1442455 1446425 + Gm15873 antisense antisense MGP_WSBEiJ_T0101023.1 MGP_WSBEiJ_G0039480.1 mouse_genomes_project 7 33089878 33091155 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0086475.1 MGP_WSBEiJ_G0032407.1 mouse_genomes_project 7 148506895 148507892 - MGP_WSBEiJ_P0086475 Phlda2 protein_coding protein_coding MGP_WSBEiJ_T0002257.1 MGP_WSBEiJ_G0002175.1 mouse_genomes_project 7 126568161 126569789 - TEC TEC MGP_WSBEiJ_T0101120.1 MGP_WSBEiJ_G0039577.1 mouse_genomes_project 7 132500643 132500837 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005179.1 MGP_WSBEiJ_G0004398.1 mouse_genomes_project 7 100075001 100121723 - Rsf1os1 antisense antisense MGP_WSBEiJ_T0085793.1 MGP_WSBEiJ_G0032248.1 mouse_genomes_project 7 136392963 136505869 - MGP_WSBEiJ_P0085793 Cpxm2 protein_coding protein_coding MGP_WSBEiJ_T0085794.1 MGP_WSBEiJ_G0032248.1 mouse_genomes_project 7 136407479 136412789 - Cpxm2 protein_coding retained_intron MGP_WSBEiJ_T0085795.1 MGP_WSBEiJ_G0032248.1 mouse_genomes_project 7 136409912 136505752 - Cpxm2 protein_coding retained_intron MGP_WSBEiJ_T0085796.1 MGP_WSBEiJ_G0032248.1 mouse_genomes_project 7 136459587 136496832 - Cpxm2 protein_coding processed_transcript MGP_WSBEiJ_T0011488.1 MGP_WSBEiJ_G0009645.1 mouse_genomes_project 7 80829405 80829663 - Gm24224 misc_RNA misc_RNA MGP_WSBEiJ_T0084805.1 MGP_WSBEiJ_G0032056.1 mouse_genomes_project 7 123482997 123507213 + MGP_WSBEiJ_P0084805 Acsm3 protein_coding protein_coding MGP_WSBEiJ_T0084806.1 MGP_WSBEiJ_G0032056.1 mouse_genomes_project 7 123482997 123507217 + MGP_WSBEiJ_P0084806 Acsm3 protein_coding protein_coding MGP_WSBEiJ_T0084807.1 MGP_WSBEiJ_G0032056.1 mouse_genomes_project 7 123482998 123507215 + MGP_WSBEiJ_P0084807 Acsm3 protein_coding protein_coding MGP_WSBEiJ_T0084808.1 MGP_WSBEiJ_G0032056.1 mouse_genomes_project 7 123482998 123509837 + MGP_WSBEiJ_P0084808 Acsm3 protein_coding protein_coding MGP_WSBEiJ_T0084809.1 MGP_WSBEiJ_G0032056.1 mouse_genomes_project 7 123488724 123507220 + MGP_WSBEiJ_P0084809 Acsm3 protein_coding protein_coding MGP_WSBEiJ_T0084812.1 MGP_WSBEiJ_G0032056.1 mouse_genomes_project 7 123496887 123501508 + Acsm3 protein_coding retained_intron MGP_WSBEiJ_T0084813.1 MGP_WSBEiJ_G0032056.1 mouse_genomes_project 7 123499381 123503338 + Acsm3 protein_coding retained_intron MGP_WSBEiJ_T0084814.1 MGP_WSBEiJ_G0032056.1 mouse_genomes_project 7 123503060 123503379 + Acsm3 protein_coding retained_intron MGP_WSBEiJ_T0015213.1 MGP_WSBEiJ_G0013343.1 mouse_genomes_project 7 2434584 2434926 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084120.1 MGP_WSBEiJ_G0031776.1 mouse_genomes_project 7 105695792 105696761 - MGP_WSBEiJ_P0084120 Olfr571 protein_coding protein_coding MGP_WSBEiJ_T0084139.1 MGP_WSBEiJ_G0031793.1 mouse_genomes_project 7 106114839 106116426 + MGP_WSBEiJ_P0084139 Olfr597 protein_coding protein_coding MGP_WSBEiJ_T0015382.1 MGP_WSBEiJ_G0013512.1 mouse_genomes_project 7 106690888 106691150 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101094.1 MGP_WSBEiJ_G0039551.1 mouse_genomes_project 7 88844509 88845437 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099720.1 MGP_WSBEiJ_G0038383.1 mouse_genomes_project 7 60227692 60227771 - snoRNA snoRNA MGP_WSBEiJ_T0086046.1 MGP_WSBEiJ_G0032317.1 mouse_genomes_project 7 145191150 145192785 + MGP_WSBEiJ_P0086046 Olfr533 protein_coding protein_coding MGP_WSBEiJ_T0082974.1 MGP_WSBEiJ_G0031499.1 mouse_genomes_project 7 67002521 67013101 + MGP_WSBEiJ_P0082974 Vimp protein_coding protein_coding MGP_WSBEiJ_T0082975.1 MGP_WSBEiJ_G0031499.1 mouse_genomes_project 7 67002549 67011148 + Vimp protein_coding retained_intron MGP_WSBEiJ_T0082976.1 MGP_WSBEiJ_G0031499.1 mouse_genomes_project 7 67002550 67013099 + MGP_WSBEiJ_P0082976 Vimp protein_coding protein_coding MGP_WSBEiJ_T0082977.1 MGP_WSBEiJ_G0031499.1 mouse_genomes_project 7 67002559 67012819 + MGP_WSBEiJ_P0082977 Vimp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082978.1 MGP_WSBEiJ_G0031499.1 mouse_genomes_project 7 67002586 67013108 + MGP_WSBEiJ_P0082978 Vimp protein_coding protein_coding MGP_WSBEiJ_T0002278.1 MGP_WSBEiJ_G0002196.1 mouse_genomes_project 7 148347032 148348434 + TEC TEC MGP_WSBEiJ_T0080886.1 MGP_WSBEiJ_G0030987.1 mouse_genomes_project 7 22793843 22798342 + MGP_WSBEiJ_P0080886 Lypd3 protein_coding protein_coding MGP_WSBEiJ_T0082187.1 MGP_WSBEiJ_G0031303.1 mouse_genomes_project 7 44182797 44458457 - MGP_WSBEiJ_P0082187 1700028J19Rik protein_coding protein_coding MGP_WSBEiJ_T0082188.1 MGP_WSBEiJ_G0031303.1 mouse_genomes_project 7 44182797 44458439 - MGP_WSBEiJ_P0082188 1700028J19Rik protein_coding protein_coding MGP_WSBEiJ_T0002265.1 MGP_WSBEiJ_G0002183.1 mouse_genomes_project 7 131346935 131348987 + TEC TEC MGP_WSBEiJ_T0010710.1 MGP_WSBEiJ_G0008867.1 mouse_genomes_project 7 62787120 62787191 - Mir344g miRNA miRNA MGP_WSBEiJ_T0010680.1 MGP_WSBEiJ_G0008837.1 mouse_genomes_project 7 29426122 29426180 + Mir3569 miRNA miRNA MGP_WSBEiJ_T0015245.1 MGP_WSBEiJ_G0013375.1 mouse_genomes_project 7 22444262 22444701 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084238.1 MGP_WSBEiJ_G0031864.1 mouse_genomes_project 7 107462339 107474782 - MGP_WSBEiJ_P0084238 protein_coding protein_coding MGP_WSBEiJ_T0008683.1 MGP_WSBEiJ_G0007022.1 mouse_genomes_project 7 33498426 33503936 + Gm26762 lincRNA lincRNA MGP_WSBEiJ_T0008875.1 MGP_WSBEiJ_G0007154.1 mouse_genomes_project 7 130887545 130896652 + Gm44854 lincRNA lincRNA MGP_WSBEiJ_T0083523.1 MGP_WSBEiJ_G0031609.1 mouse_genomes_project 7 86729139 86729742 + MGP_WSBEiJ_P0083523 protein_coding protein_coding MGP_WSBEiJ_T0084424.1 MGP_WSBEiJ_G0031957.1 mouse_genomes_project 7 111551232 111552179 + MGP_WSBEiJ_P0084424 protein_coding protein_coding MGP_WSBEiJ_T0080711.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17561197 17585267 - MGP_WSBEiJ_P0080711 Relb protein_coding unknown_likely_coding MGP_WSBEiJ_T0080712.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17561200 17585463 - Relb protein_coding retained_intron MGP_WSBEiJ_T0080713.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17561200 17585463 - Relb protein_coding retained_intron MGP_WSBEiJ_T0080714.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17561200 17585463 - Relb protein_coding retained_intron MGP_WSBEiJ_T0080715.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17561200 17585463 - MGP_WSBEiJ_P0080715 Relb protein_coding protein_coding MGP_WSBEiJ_T0080716.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17561200 17585463 - MGP_WSBEiJ_P0080716 Relb protein_coding protein_coding MGP_WSBEiJ_T0080717.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17561206 17585463 - MGP_WSBEiJ_P0080717 Relb protein_coding protein_coding MGP_WSBEiJ_T0080718.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17571261 17584809 - Relb protein_coding processed_transcript MGP_WSBEiJ_T0080719.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17572659 17584498 - Relb protein_coding processed_transcript MGP_WSBEiJ_T0080720.1 MGP_WSBEiJ_G0030933.1 mouse_genomes_project 7 17572723 17584459 - Relb protein_coding processed_transcript MGP_WSBEiJ_T0082038.1 MGP_WSBEiJ_G0031250.1 mouse_genomes_project 7 37729676 37743823 + MGP_WSBEiJ_P0082038 1600014C10Rik protein_coding protein_coding MGP_WSBEiJ_T0082039.1 MGP_WSBEiJ_G0031250.1 mouse_genomes_project 7 37729699 37730359 + 1600014C10Rik protein_coding processed_transcript MGP_WSBEiJ_T0082040.1 MGP_WSBEiJ_G0031250.1 mouse_genomes_project 7 37729720 37742849 + MGP_WSBEiJ_P0082040 1600014C10Rik protein_coding protein_coding MGP_WSBEiJ_T0082041.1 MGP_WSBEiJ_G0031250.1 mouse_genomes_project 7 37730112 37743823 + MGP_WSBEiJ_P0082041 1600014C10Rik protein_coding protein_coding MGP_WSBEiJ_T0082042.1 MGP_WSBEiJ_G0031250.1 mouse_genomes_project 7 37730307 37735391 + MGP_WSBEiJ_P0082042 1600014C10Rik protein_coding protein_coding MGP_WSBEiJ_T0082043.1 MGP_WSBEiJ_G0031250.1 mouse_genomes_project 7 37730357 37741231 + MGP_WSBEiJ_P0082043 1600014C10Rik protein_coding protein_coding MGP_WSBEiJ_T0082044.1 MGP_WSBEiJ_G0031250.1 mouse_genomes_project 7 37732723 37741523 + MGP_WSBEiJ_P0082044 1600014C10Rik protein_coding protein_coding MGP_WSBEiJ_T0080859.1 MGP_WSBEiJ_G0030979.1 mouse_genomes_project 7 22627585 22652453 + MGP_WSBEiJ_P0080859 Cadm4 protein_coding protein_coding MGP_WSBEiJ_T0080860.1 MGP_WSBEiJ_G0030979.1 mouse_genomes_project 7 22647873 22650709 + Cadm4 protein_coding processed_transcript MGP_WSBEiJ_T0085233.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130841479 130845508 - MGP_WSBEiJ_P0085233 Aldoa protein_coding protein_coding MGP_WSBEiJ_T0085234.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130841480 130846668 - MGP_WSBEiJ_P0085234 Aldoa protein_coding protein_coding MGP_WSBEiJ_T0085235.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130841481 130845395 - MGP_WSBEiJ_P0085235 Aldoa protein_coding protein_coding MGP_WSBEiJ_T0085236.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130842161 130844536 - Aldoa protein_coding processed_transcript MGP_WSBEiJ_T0085237.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130842198 130844561 - Aldoa protein_coding retained_intron MGP_WSBEiJ_T0085238.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130842198 130844005 - Aldoa protein_coding retained_intron MGP_WSBEiJ_T0085239.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130842288 130846267 - MGP_WSBEiJ_P0085239 Aldoa protein_coding protein_coding MGP_WSBEiJ_T0085240.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130842520 130845247 - MGP_WSBEiJ_P0085240 Aldoa protein_coding protein_coding MGP_WSBEiJ_T0085241.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130842731 130845424 - Aldoa protein_coding retained_intron MGP_WSBEiJ_T0085242.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130842917 130845363 - MGP_WSBEiJ_P0085242 Aldoa protein_coding protein_coding MGP_WSBEiJ_T0085243.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130842967 130846257 - MGP_WSBEiJ_P0085243 Aldoa protein_coding protein_coding MGP_WSBEiJ_T0085244.1 MGP_WSBEiJ_G0032139.1 mouse_genomes_project 7 130843089 130846972 - MGP_WSBEiJ_P0085244 Aldoa protein_coding protein_coding MGP_WSBEiJ_T0015370.1 MGP_WSBEiJ_G0013500.1 mouse_genomes_project 7 100942310 100942624 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083246.1 MGP_WSBEiJ_G0031551.1 mouse_genomes_project 7 81551136 81621379 + MGP_WSBEiJ_P0083246 Zfp710 protein_coding protein_coding MGP_WSBEiJ_T0083247.1 MGP_WSBEiJ_G0031551.1 mouse_genomes_project 7 81554479 81615669 + MGP_WSBEiJ_P0083247 Zfp710 protein_coding protein_coding MGP_WSBEiJ_T0083248.1 MGP_WSBEiJ_G0031551.1 mouse_genomes_project 7 81615576 81625080 + MGP_WSBEiJ_P0083248 Zfp710 protein_coding protein_coding MGP_WSBEiJ_T0098526.1 MGP_WSBEiJ_G0037189.1 mouse_genomes_project 7 147371718 147371826 + Gm26143 snRNA snRNA MGP_WSBEiJ_T0008835.1 MGP_WSBEiJ_G0007129.1 mouse_genomes_project 7 110344404 110395658 + Platr28 lincRNA lincRNA MGP_WSBEiJ_T0008901.1 MGP_WSBEiJ_G0007171.1 mouse_genomes_project 7 138035262 138036639 - Gm28747 lincRNA lincRNA MGP_WSBEiJ_T0083538.1 MGP_WSBEiJ_G0031623.1 mouse_genomes_project 7 88596245 88597244 - MGP_WSBEiJ_P0083538 Olfr298 protein_coding protein_coding MGP_WSBEiJ_T0084975.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127019703 127058372 + Tnrc6a protein_coding processed_transcript MGP_WSBEiJ_T0084976.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127019995 127089702 + MGP_WSBEiJ_P0084976 Tnrc6a protein_coding protein_coding MGP_WSBEiJ_T0084977.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127019999 127091011 + MGP_WSBEiJ_P0084977 Tnrc6a protein_coding protein_coding MGP_WSBEiJ_T0084978.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127020074 127073413 + MGP_WSBEiJ_P0084978 Tnrc6a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084979.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127064879 127066662 + Tnrc6a protein_coding retained_intron MGP_WSBEiJ_T0084980.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127066388 127089693 + MGP_WSBEiJ_P0084980 Tnrc6a protein_coding protein_coding MGP_WSBEiJ_T0084981.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127067144 127071456 + Tnrc6a protein_coding retained_intron MGP_WSBEiJ_T0084982.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127067403 127070190 + Tnrc6a protein_coding retained_intron MGP_WSBEiJ_T0084983.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127068615 127069955 + Tnrc6a protein_coding retained_intron MGP_WSBEiJ_T0084984.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127069972 127076337 + MGP_WSBEiJ_P0084984 Tnrc6a protein_coding protein_coding MGP_WSBEiJ_T0084985.1 MGP_WSBEiJ_G0032098.1 mouse_genomes_project 7 127075636 127089464 + Tnrc6a protein_coding retained_intron MGP_WSBEiJ_T0086329.1 MGP_WSBEiJ_G0032382.1 mouse_genomes_project 7 146893265 146947915 - MGP_WSBEiJ_P0086329 Mob2 protein_coding protein_coding MGP_WSBEiJ_T0099742.1 MGP_WSBEiJ_G0038405.1 mouse_genomes_project 7 113317973 113318106 + Gm25636 snoRNA snoRNA MGP_WSBEiJ_T0002203.1 MGP_WSBEiJ_G0002122.1 mouse_genomes_project 7 65403499 65403971 + TEC TEC MGP_WSBEiJ_T0083155.1 MGP_WSBEiJ_G0031532.1 mouse_genomes_project 7 80369030 80375845 + MGP_WSBEiJ_P0083155 Isg20 protein_coding protein_coding MGP_WSBEiJ_T0083156.1 MGP_WSBEiJ_G0031532.1 mouse_genomes_project 7 80369064 80375935 + MGP_WSBEiJ_P0083156 Isg20 protein_coding protein_coding MGP_WSBEiJ_T0083157.1 MGP_WSBEiJ_G0031532.1 mouse_genomes_project 7 80369371 80376022 + MGP_WSBEiJ_P0083157 Isg20 protein_coding protein_coding MGP_WSBEiJ_T0083158.1 MGP_WSBEiJ_G0031532.1 mouse_genomes_project 7 80369587 80372641 + Isg20 protein_coding retained_intron MGP_WSBEiJ_T0083159.1 MGP_WSBEiJ_G0031532.1 mouse_genomes_project 7 80369841 80375977 + MGP_WSBEiJ_P0083159 Isg20 protein_coding protein_coding MGP_WSBEiJ_T0083160.1 MGP_WSBEiJ_G0031532.1 mouse_genomes_project 7 80369935 80375815 + MGP_WSBEiJ_P0083160 Isg20 protein_coding protein_coding MGP_WSBEiJ_T0101002.1 MGP_WSBEiJ_G0039459.1 mouse_genomes_project 7 14658200 14658561 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082708.1 MGP_WSBEiJ_G0031438.1 mouse_genomes_project 7 48741507 48748100 - MGP_WSBEiJ_P0082708 Mrgprx1 protein_coding protein_coding MGP_WSBEiJ_T0082748.1 MGP_WSBEiJ_G0031450.1 mouse_genomes_project 7 50524776 50604977 + MGP_WSBEiJ_P0082748 Prmt3 protein_coding protein_coding MGP_WSBEiJ_T0082749.1 MGP_WSBEiJ_G0031450.1 mouse_genomes_project 7 50524776 50529891 + MGP_WSBEiJ_P0082749 Prmt3 protein_coding protein_coding MGP_WSBEiJ_T0082750.1 MGP_WSBEiJ_G0031450.1 mouse_genomes_project 7 50524867 50529553 + Prmt3 protein_coding processed_transcript MGP_WSBEiJ_T0082751.1 MGP_WSBEiJ_G0031450.1 mouse_genomes_project 7 50524867 50574334 + MGP_WSBEiJ_P0082751 Prmt3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082752.1 MGP_WSBEiJ_G0031450.1 mouse_genomes_project 7 50524869 50528024 + Prmt3 protein_coding processed_transcript MGP_WSBEiJ_T0082753.1 MGP_WSBEiJ_G0031450.1 mouse_genomes_project 7 50524974 50534721 + Prmt3 protein_coding processed_transcript MGP_WSBEiJ_T0082754.1 MGP_WSBEiJ_G0031450.1 mouse_genomes_project 7 50527263 50534751 + MGP_WSBEiJ_P0082754 Prmt3 protein_coding protein_coding MGP_WSBEiJ_T0082755.1 MGP_WSBEiJ_G0031450.1 mouse_genomes_project 7 50545828 50574530 + MGP_WSBEiJ_P0082755 Prmt3 protein_coding protein_coding MGP_WSBEiJ_T0082781.1 MGP_WSBEiJ_G0031461.1 mouse_genomes_project 7 55729232 56146921 + Luzp2 protein_coding retained_intron MGP_WSBEiJ_T0082782.1 MGP_WSBEiJ_G0031461.1 mouse_genomes_project 7 55729349 56165840 + MGP_WSBEiJ_P0082782 Luzp2 protein_coding protein_coding MGP_WSBEiJ_T0099739.1 MGP_WSBEiJ_G0038402.1 mouse_genomes_project 7 108536130 108536269 - Gm22504 snoRNA snoRNA MGP_WSBEiJ_T0086563.1 MGP_WSBEiJ_G0032431.1 mouse_genomes_project 7 150418823 150428047 + MGP_WSBEiJ_P0086563 Mrgprd protein_coding protein_coding MGP_WSBEiJ_T0015230.1 MGP_WSBEiJ_G0013360.1 mouse_genomes_project 7 11597015 11597469 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015244.1 MGP_WSBEiJ_G0013374.1 mouse_genomes_project 7 22157592 22157901 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084247.1 MGP_WSBEiJ_G0031873.1 mouse_genomes_project 7 107816886 107817654 - MGP_WSBEiJ_P0084247 protein_coding protein_coding MGP_WSBEiJ_T0082466.1 MGP_WSBEiJ_G0031372.1 mouse_genomes_project 7 45757927 45758969 + MGP_WSBEiJ_P0082466 Lhb protein_coding protein_coding MGP_WSBEiJ_T0008767.1 MGP_WSBEiJ_G0007087.1 mouse_genomes_project 7 74379003 74379382 - Gm28746 lincRNA lincRNA MGP_WSBEiJ_T0085028.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129617940 129688769 - MGP_WSBEiJ_P0085028 Gtf3c1 protein_coding protein_coding MGP_WSBEiJ_T0085029.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129617940 129688872 - MGP_WSBEiJ_P0085029 Gtf3c1 protein_coding protein_coding MGP_WSBEiJ_T0085030.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129621169 129626964 - Gtf3c1 protein_coding retained_intron MGP_WSBEiJ_T0085031.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129624516 129634720 - MGP_WSBEiJ_P0085031 Gtf3c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085032.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129640759 129688852 - Gtf3c1 protein_coding retained_intron MGP_WSBEiJ_T0085033.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129641071 129688834 - MGP_WSBEiJ_P0085033 Gtf3c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085034.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129641191 129649342 - MGP_WSBEiJ_P0085034 Gtf3c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085035.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129647992 129650109 - Gtf3c1 protein_coding retained_intron MGP_WSBEiJ_T0085036.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129671488 129679766 - Gtf3c1 protein_coding retained_intron MGP_WSBEiJ_T0085037.1 MGP_WSBEiJ_G0032109.1 mouse_genomes_project 7 129673497 129686805 - MGP_WSBEiJ_P0085037 Gtf3c1 protein_coding protein_coding MGP_WSBEiJ_T0098473.1 MGP_WSBEiJ_G0037136.1 mouse_genomes_project 7 37334399 37334505 - Gm22302 snRNA snRNA MGP_WSBEiJ_T0083765.1 MGP_WSBEiJ_G0031684.1 mouse_genomes_project 7 100996769 101005755 + MGP_WSBEiJ_P0083765 Lrrc32 protein_coding protein_coding MGP_WSBEiJ_T0083766.1 MGP_WSBEiJ_G0031684.1 mouse_genomes_project 7 100997179 101009685 + MGP_WSBEiJ_P0083766 Lrrc32 protein_coding protein_coding MGP_WSBEiJ_T0083767.1 MGP_WSBEiJ_G0031684.1 mouse_genomes_project 7 101001722 101009335 + MGP_WSBEiJ_P0083767 Lrrc32 protein_coding protein_coding MGP_WSBEiJ_T0015247.1 MGP_WSBEiJ_G0013377.1 mouse_genomes_project 7 22886589 22886792 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015376.1 MGP_WSBEiJ_G0013506.1 mouse_genomes_project 7 103279365 103279802 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005229.1 MGP_WSBEiJ_G0004433.1 mouse_genomes_project 7 145612990 145622153 - C330022C24Rik antisense antisense MGP_WSBEiJ_T0099746.1 MGP_WSBEiJ_G0038409.1 mouse_genomes_project 7 118315642 118315774 - Gm24982 snoRNA snoRNA MGP_WSBEiJ_T0015271.1 MGP_WSBEiJ_G0013401.1 mouse_genomes_project 7 33455021 33455354 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084142.1 MGP_WSBEiJ_G0031796.1 mouse_genomes_project 7 106148903 106149848 - MGP_WSBEiJ_P0084142 protein_coding protein_coding MGP_WSBEiJ_T0015374.1 MGP_WSBEiJ_G0013504.1 mouse_genomes_project 7 102828737 102829830 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082296.1 MGP_WSBEiJ_G0031325.1 mouse_genomes_project 7 44858468 44925097 - MGP_WSBEiJ_P0082296 protein_coding protein_coding MGP_WSBEiJ_T0005217.1 MGP_WSBEiJ_G0004424.1 mouse_genomes_project 7 132138998 132142260 - Gm15533 antisense antisense MGP_WSBEiJ_T0005218.1 MGP_WSBEiJ_G0004424.1 mouse_genomes_project 7 132139948 132142290 - Gm15533 antisense antisense MGP_WSBEiJ_T0008744.1 MGP_WSBEiJ_G0007069.1 mouse_genomes_project 7 68167899 68189600 - 1700112J16Rik lincRNA lincRNA MGP_WSBEiJ_T0002255.1 MGP_WSBEiJ_G0002173.1 mouse_genomes_project 7 126323977 126326725 + TEC TEC MGP_WSBEiJ_T0082549.1 MGP_WSBEiJ_G0031394.1 mouse_genomes_project 7 46073044 46081581 - MGP_WSBEiJ_P0082549 Sphk2 protein_coding protein_coding MGP_WSBEiJ_T0082550.1 MGP_WSBEiJ_G0031394.1 mouse_genomes_project 7 46073844 46081481 - MGP_WSBEiJ_P0082550 Sphk2 protein_coding protein_coding MGP_WSBEiJ_T0082551.1 MGP_WSBEiJ_G0031394.1 mouse_genomes_project 7 46073862 46078787 - MGP_WSBEiJ_P0082551 Sphk2 protein_coding protein_coding MGP_WSBEiJ_T0080619.1 MGP_WSBEiJ_G0030905.1 mouse_genomes_project 7 17010293 17031457 - MGP_WSBEiJ_P0080619 Gm4969 protein_coding protein_coding MGP_WSBEiJ_T0080620.1 MGP_WSBEiJ_G0030905.1 mouse_genomes_project 7 17010293 17027583 - MGP_WSBEiJ_P0080620 Gm4969 protein_coding unknown_likely_coding MGP_WSBEiJ_T0080621.1 MGP_WSBEiJ_G0030905.1 mouse_genomes_project 7 17012798 17031430 - MGP_WSBEiJ_P0080621 Gm4969 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011494.1 MGP_WSBEiJ_G0009651.1 mouse_genomes_project 7 126307408 126307677 + Gm26414 misc_RNA misc_RNA MGP_WSBEiJ_T0084061.1 MGP_WSBEiJ_G0031746.1 mouse_genomes_project 7 104863183 104872613 + MGP_WSBEiJ_P0084061 Art1 protein_coding protein_coding MGP_WSBEiJ_T0005204.1 MGP_WSBEiJ_G0004413.1 mouse_genomes_project 7 125531122 125532061 + 1700069B07Rik antisense antisense MGP_WSBEiJ_T0005205.1 MGP_WSBEiJ_G0004413.1 mouse_genomes_project 7 125531236 125532059 + 1700069B07Rik antisense antisense MGP_WSBEiJ_T0011486.1 MGP_WSBEiJ_G0009643.1 mouse_genomes_project 7 76274197 76274548 - Gm22326 misc_RNA misc_RNA MGP_WSBEiJ_T0085129.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130597060 130613328 - MGP_WSBEiJ_P0085129 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085130.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130597253 130610758 - MGP_WSBEiJ_P0085130 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085131.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130597253 130611791 - MGP_WSBEiJ_P0085131 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085132.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130597940 130610701 - MGP_WSBEiJ_P0085132 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085133.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130597944 130601112 - Cln3 protein_coding processed_transcript MGP_WSBEiJ_T0085134.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130597962 130598583 - Cln3 protein_coding processed_transcript MGP_WSBEiJ_T0085135.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130597976 130605378 - Cln3 protein_coding retained_intron MGP_WSBEiJ_T0085136.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130605873 130611818 - Cln3 protein_coding retained_intron MGP_WSBEiJ_T0085137.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130606725 130610737 - Cln3 protein_coding processed_transcript MGP_WSBEiJ_T0085138.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130606761 130610873 - MGP_WSBEiJ_P0085138 Cln3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085139.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130606777 130611731 - MGP_WSBEiJ_P0085139 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085140.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130606923 130611034 - MGP_WSBEiJ_P0085140 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085141.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130607780 130610625 - Cln3 protein_coding retained_intron MGP_WSBEiJ_T0085142.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130608341 130610827 - Cln3 protein_coding retained_intron MGP_WSBEiJ_T0085143.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130609023 130610853 - Cln3 protein_coding processed_transcript MGP_WSBEiJ_T0085144.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130609168 130611077 - MGP_WSBEiJ_P0085144 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085145.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130609171 130612089 - MGP_WSBEiJ_P0085145 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085146.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130609225 130611065 - MGP_WSBEiJ_P0085146 Cln3 protein_coding protein_coding MGP_WSBEiJ_T0085147.1 MGP_WSBEiJ_G0032125.1 mouse_genomes_project 7 130610832 130612297 - Cln3 protein_coding processed_transcript MGP_WSBEiJ_T0015283.1 MGP_WSBEiJ_G0013413.1 mouse_genomes_project 7 41057409 41058904 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084126.1 MGP_WSBEiJ_G0031781.1 mouse_genomes_project 7 105760714 105761653 - MGP_WSBEiJ_P0084126 Olfr577 protein_coding protein_coding MGP_WSBEiJ_T0085505.1 MGP_WSBEiJ_G0032191.1 mouse_genomes_project 7 131891628 131896964 + MGP_WSBEiJ_P0085505 Orai3 protein_coding protein_coding MGP_WSBEiJ_T0085506.1 MGP_WSBEiJ_G0032191.1 mouse_genomes_project 7 131891628 131896964 + MGP_WSBEiJ_P0085506 Orai3 protein_coding protein_coding MGP_WSBEiJ_T0085507.1 MGP_WSBEiJ_G0032191.1 mouse_genomes_project 7 131891628 131896506 + MGP_WSBEiJ_P0085507 Orai3 protein_coding protein_coding MGP_WSBEiJ_T0085021.1 MGP_WSBEiJ_G0032107.1 mouse_genomes_project 7 129527799 129555159 + MGP_WSBEiJ_P0085021 Il4ra protein_coding protein_coding MGP_WSBEiJ_T0085022.1 MGP_WSBEiJ_G0032107.1 mouse_genomes_project 7 129527950 129547966 + Il4ra protein_coding retained_intron MGP_WSBEiJ_T0085023.1 MGP_WSBEiJ_G0032107.1 mouse_genomes_project 7 129527950 129542889 + MGP_WSBEiJ_P0085023 Il4ra protein_coding protein_coding MGP_WSBEiJ_T0085024.1 MGP_WSBEiJ_G0032107.1 mouse_genomes_project 7 129527955 129545683 + MGP_WSBEiJ_P0085024 Il4ra protein_coding protein_coding MGP_WSBEiJ_T0085025.1 MGP_WSBEiJ_G0032107.1 mouse_genomes_project 7 129527966 129553652 + MGP_WSBEiJ_P0085025 Il4ra protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002189.1 MGP_WSBEiJ_G0002108.1 mouse_genomes_project 7 55977781 55979172 + TEC TEC MGP_WSBEiJ_T0008863.1 MGP_WSBEiJ_G0007146.1 mouse_genomes_project 7 128875450 128883259 + Gm45092 lincRNA lincRNA MGP_WSBEiJ_T0086040.1 MGP_WSBEiJ_G0032311.1 mouse_genomes_project 7 145025849 145026899 + MGP_WSBEiJ_P0086040 Olfr525 protein_coding protein_coding MGP_WSBEiJ_T0085530.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131952170 131978124 + Stx4a protein_coding processed_transcript MGP_WSBEiJ_T0085531.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131970713 131978124 + MGP_WSBEiJ_P0085531 Stx4a protein_coding protein_coding MGP_WSBEiJ_T0085532.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131970917 131978105 + MGP_WSBEiJ_P0085532 Stx4a protein_coding protein_coding MGP_WSBEiJ_T0085533.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131970919 131972894 + Stx4a protein_coding retained_intron MGP_WSBEiJ_T0085534.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131970927 131975568 + MGP_WSBEiJ_P0085534 Stx4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085535.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131971634 131975536 + Stx4a protein_coding retained_intron MGP_WSBEiJ_T0085536.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131972547 131977780 + Stx4a protein_coding retained_intron MGP_WSBEiJ_T0085537.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131974733 131977601 + Stx4a protein_coding retained_intron MGP_WSBEiJ_T0085538.1 MGP_WSBEiJ_G0032196.1 mouse_genomes_project 7 131977493 131978124 + Stx4a protein_coding retained_intron MGP_WSBEiJ_T0081253.1 MGP_WSBEiJ_G0031080.1 mouse_genomes_project 7 26718792 26735898 + protein_coding retained_intron MGP_WSBEiJ_T0081254.1 MGP_WSBEiJ_G0031080.1 mouse_genomes_project 7 26718792 26733585 + protein_coding retained_intron MGP_WSBEiJ_T0082585.1 MGP_WSBEiJ_G0031402.1 mouse_genomes_project 7 46196356 46201919 - MGP_WSBEiJ_P0082585 Grwd1 protein_coding protein_coding MGP_WSBEiJ_T0082586.1 MGP_WSBEiJ_G0031402.1 mouse_genomes_project 7 46196359 46201906 - MGP_WSBEiJ_P0082586 Grwd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082587.1 MGP_WSBEiJ_G0031402.1 mouse_genomes_project 7 46196361 46202074 - MGP_WSBEiJ_P0082587 Grwd1 protein_coding protein_coding MGP_WSBEiJ_T0082588.1 MGP_WSBEiJ_G0031402.1 mouse_genomes_project 7 46197192 46202011 - MGP_WSBEiJ_P0082588 Grwd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083063.1 MGP_WSBEiJ_G0031517.1 mouse_genomes_project 7 73263379 73517852 - MGP_WSBEiJ_P0083063 Mctp2 protein_coding protein_coding MGP_WSBEiJ_T0083064.1 MGP_WSBEiJ_G0031517.1 mouse_genomes_project 7 73265962 73298873 - MGP_WSBEiJ_P0083064 Mctp2 protein_coding protein_coding MGP_WSBEiJ_T0083065.1 MGP_WSBEiJ_G0031517.1 mouse_genomes_project 7 73310001 73364178 - MGP_WSBEiJ_P0083065 Mctp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083066.1 MGP_WSBEiJ_G0031517.1 mouse_genomes_project 7 73431335 73435322 - Mctp2 protein_coding retained_intron MGP_WSBEiJ_T0083067.1 MGP_WSBEiJ_G0031517.1 mouse_genomes_project 7 73462824 73517852 - Mctp2 protein_coding retained_intron MGP_WSBEiJ_T0101033.1 MGP_WSBEiJ_G0039490.1 mouse_genomes_project 7 42225268 42225510 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080784.1 MGP_WSBEiJ_G0030955.1 mouse_genomes_project 7 21578749 21579769 - MGP_WSBEiJ_P0080784 protein_coding protein_coding MGP_WSBEiJ_T0085498.1 MGP_WSBEiJ_G0032190.1 mouse_genomes_project 7 131864844 131871337 + MGP_WSBEiJ_P0085498 Fbxl19 protein_coding protein_coding MGP_WSBEiJ_T0085499.1 MGP_WSBEiJ_G0032190.1 mouse_genomes_project 7 131865504 131890741 + MGP_WSBEiJ_P0085499 Fbxl19 protein_coding protein_coding MGP_WSBEiJ_T0085500.1 MGP_WSBEiJ_G0032190.1 mouse_genomes_project 7 131866073 131871340 + MGP_WSBEiJ_P0085500 Fbxl19 protein_coding protein_coding MGP_WSBEiJ_T0085501.1 MGP_WSBEiJ_G0032190.1 mouse_genomes_project 7 131866089 131891290 + MGP_WSBEiJ_P0085501 Fbxl19 protein_coding protein_coding MGP_WSBEiJ_T0085502.1 MGP_WSBEiJ_G0032190.1 mouse_genomes_project 7 131868397 131890742 + MGP_WSBEiJ_P0085502 Fbxl19 protein_coding protein_coding MGP_WSBEiJ_T0085503.1 MGP_WSBEiJ_G0032190.1 mouse_genomes_project 7 131869769 131890541 + MGP_WSBEiJ_P0085503 Fbxl19 protein_coding protein_coding MGP_WSBEiJ_T0085504.1 MGP_WSBEiJ_G0032190.1 mouse_genomes_project 7 131869896 131891297 + MGP_WSBEiJ_P0085504 Fbxl19 protein_coding protein_coding MGP_WSBEiJ_T0099718.1 MGP_WSBEiJ_G0038381.1 mouse_genomes_project 7 60224084 60224163 - Gm24966 snoRNA snoRNA MGP_WSBEiJ_T0010675.1 MGP_WSBEiJ_G0008832.1 mouse_genomes_project 7 27805822 27805881 - Mir1963 miRNA miRNA MGP_WSBEiJ_T0084446.1 MGP_WSBEiJ_G0031976.1 mouse_genomes_project 7 112241510 112261818 + MGP_WSBEiJ_P0084446 Tub protein_coding protein_coding MGP_WSBEiJ_T0084447.1 MGP_WSBEiJ_G0031976.1 mouse_genomes_project 7 112258785 112260921 + Tub protein_coding retained_intron MGP_WSBEiJ_T0101007.1 MGP_WSBEiJ_G0039464.1 mouse_genomes_project 7 21880163 21881053 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008669.1 MGP_WSBEiJ_G0007009.1 mouse_genomes_project 7 22586603 22589556 + Gm44512 lincRNA lincRNA MGP_WSBEiJ_T0101059.1 MGP_WSBEiJ_G0039516.1 mouse_genomes_project 7 48830546 48831495 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082756.1 MGP_WSBEiJ_G0031451.1 mouse_genomes_project 7 50659065 50716319 + MGP_WSBEiJ_P0082756 Slc6a5 protein_coding protein_coding MGP_WSBEiJ_T0082757.1 MGP_WSBEiJ_G0031451.1 mouse_genomes_project 7 50660619 50711966 + MGP_WSBEiJ_P0082757 Slc6a5 protein_coding protein_coding MGP_WSBEiJ_T0099745.1 MGP_WSBEiJ_G0038408.1 mouse_genomes_project 7 116015238 116015368 - Gm24154 snoRNA snoRNA MGP_WSBEiJ_T0098472.1 MGP_WSBEiJ_G0037135.1 mouse_genomes_project 7 29178588 29178781 - Gm25259 snRNA snRNA MGP_WSBEiJ_T0084372.1 MGP_WSBEiJ_G0031913.1 mouse_genomes_project 7 109809535 109810582 - MGP_WSBEiJ_P0084372 Olfr697 protein_coding protein_coding MGP_WSBEiJ_T0085148.1 MGP_WSBEiJ_G0032126.1 mouse_genomes_project 7 130612452 130616623 + MGP_WSBEiJ_P0085148 Apobr protein_coding protein_coding MGP_WSBEiJ_T0085149.1 MGP_WSBEiJ_G0032126.1 mouse_genomes_project 7 130612501 130615462 + MGP_WSBEiJ_P0085149 Apobr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085150.1 MGP_WSBEiJ_G0032126.1 mouse_genomes_project 7 130612502 130615881 + MGP_WSBEiJ_P0085150 Apobr protein_coding protein_coding MGP_WSBEiJ_T0085151.1 MGP_WSBEiJ_G0032126.1 mouse_genomes_project 7 130614590 130615956 + MGP_WSBEiJ_P0085151 Apobr protein_coding protein_coding MGP_WSBEiJ_T0085152.1 MGP_WSBEiJ_G0032126.1 mouse_genomes_project 7 130615184 130615836 + MGP_WSBEiJ_P0085152 Apobr protein_coding protein_coding MGP_WSBEiJ_T0100976.1 MGP_WSBEiJ_G0039433.1 mouse_genomes_project 7 9489498 9490449 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100990.1 MGP_WSBEiJ_G0039447.1 mouse_genomes_project 7 12063755 12064766 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008758.1 MGP_WSBEiJ_G0007078.1 mouse_genomes_project 7 72522925 72532398 + lincRNA lincRNA MGP_WSBEiJ_T0002245.1 MGP_WSBEiJ_G0002163.1 mouse_genomes_project 7 119969918 119970875 - TEC TEC MGP_WSBEiJ_T0099719.1 MGP_WSBEiJ_G0038382.1 mouse_genomes_project 7 60227348 60227436 - Gm22496 snoRNA snoRNA MGP_WSBEiJ_T0084262.1 MGP_WSBEiJ_G0031888.1 mouse_genomes_project 7 108201322 108202384 - MGP_WSBEiJ_P0084262 Olfr690 protein_coding protein_coding MGP_WSBEiJ_T0002220.1 MGP_WSBEiJ_G0002138.1 mouse_genomes_project 7 77357373 77359429 + TEC TEC MGP_WSBEiJ_T0084127.1 MGP_WSBEiJ_G0031782.1 mouse_genomes_project 7 105771831 105772773 - MGP_WSBEiJ_P0084127 Olfr578 protein_coding protein_coding MGP_WSBEiJ_T0084154.1 MGP_WSBEiJ_G0031808.1 mouse_genomes_project 7 106419882 106420839 + MGP_WSBEiJ_P0084154 Olfr618 protein_coding protein_coding MGP_WSBEiJ_T0098481.1 MGP_WSBEiJ_G0037144.1 mouse_genomes_project 7 53791530 53791638 + Gm22444 snRNA snRNA MGP_WSBEiJ_T0084359.1 MGP_WSBEiJ_G0031906.1 mouse_genomes_project 7 108640147 108648795 - MGP_WSBEiJ_P0084359 Tpp1 protein_coding protein_coding MGP_WSBEiJ_T0084299.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108495588 108527311 - MGP_WSBEiJ_P0084299 Trim3 protein_coding protein_coding MGP_WSBEiJ_T0084300.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108501600 108527363 - MGP_WSBEiJ_P0084300 Trim3 protein_coding protein_coding MGP_WSBEiJ_T0084301.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108502425 108527340 - MGP_WSBEiJ_P0084301 Trim3 protein_coding protein_coding MGP_WSBEiJ_T0084302.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108502916 108503620 - Trim3 protein_coding retained_intron MGP_WSBEiJ_T0084303.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108504071 108505168 - Trim3 protein_coding retained_intron MGP_WSBEiJ_T0084304.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108508793 108509789 - Trim3 protein_coding retained_intron MGP_WSBEiJ_T0084305.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108510546 108527328 - MGP_WSBEiJ_P0084305 Trim3 protein_coding protein_coding MGP_WSBEiJ_T0084306.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108510868 108527374 - Trim3 protein_coding processed_transcript MGP_WSBEiJ_T0084307.1 MGP_WSBEiJ_G0031899.1 mouse_genomes_project 7 108511145 108527288 - MGP_WSBEiJ_P0084307 Trim3 protein_coding protein_coding MGP_WSBEiJ_T0002201.1 MGP_WSBEiJ_G0002120.1 mouse_genomes_project 7 65175850 65179253 - TEC TEC MGP_WSBEiJ_T0082578.1 MGP_WSBEiJ_G0031400.1 mouse_genomes_project 7 46178240 46184896 - MGP_WSBEiJ_P0082578 Cyth2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082579.1 MGP_WSBEiJ_G0031400.1 mouse_genomes_project 7 46178250 46184876 - MGP_WSBEiJ_P0082579 Cyth2 protein_coding protein_coding MGP_WSBEiJ_T0082580.1 MGP_WSBEiJ_G0031400.1 mouse_genomes_project 7 46178362 46184710 - MGP_WSBEiJ_P0082580 Cyth2 protein_coding protein_coding MGP_WSBEiJ_T0082581.1 MGP_WSBEiJ_G0031400.1 mouse_genomes_project 7 46180648 46184866 - Cyth2 protein_coding processed_transcript MGP_WSBEiJ_T0082582.1 MGP_WSBEiJ_G0031400.1 mouse_genomes_project 7 46181448 46185175 - MGP_WSBEiJ_P0082582 Cyth2 protein_coding protein_coding MGP_WSBEiJ_T0082583.1 MGP_WSBEiJ_G0031400.1 mouse_genomes_project 7 46182117 46184855 - Cyth2 protein_coding processed_transcript MGP_WSBEiJ_T0002190.1 MGP_WSBEiJ_G0002109.1 mouse_genomes_project 7 56173847 56176070 + TEC TEC MGP_WSBEiJ_T0086116.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145905125 145921349 + MGP_WSBEiJ_P0086116 Pkp3 protein_coding protein_coding MGP_WSBEiJ_T0086117.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145906054 145909568 + MGP_WSBEiJ_P0086117 Pkp3 protein_coding protein_coding MGP_WSBEiJ_T0086118.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145906675 145921349 + MGP_WSBEiJ_P0086118 Pkp3 protein_coding protein_coding MGP_WSBEiJ_T0086119.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145906690 145910043 + MGP_WSBEiJ_P0086119 Pkp3 protein_coding protein_coding MGP_WSBEiJ_T0086120.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145906695 145909617 + MGP_WSBEiJ_P0086120 Pkp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086121.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145918599 145919716 + Pkp3 protein_coding retained_intron MGP_WSBEiJ_T0086122.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145918984 145921346 + Pkp3 protein_coding retained_intron MGP_WSBEiJ_T0086123.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145919046 145919687 + Pkp3 protein_coding retained_intron MGP_WSBEiJ_T0086124.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145920249 145920755 + Pkp3 protein_coding retained_intron MGP_WSBEiJ_T0086125.1 MGP_WSBEiJ_G0032347.1 mouse_genomes_project 7 145920699 145921348 + MGP_WSBEiJ_P0086125 Pkp3 protein_coding protein_coding MGP_WSBEiJ_T0085597.1 MGP_WSBEiJ_G0032209.1 mouse_genomes_project 7 132206823 132269089 + MGP_WSBEiJ_P0085597 protein_coding protein_coding MGP_WSBEiJ_T0085598.1 MGP_WSBEiJ_G0032209.1 mouse_genomes_project 7 132206852 132269088 + MGP_WSBEiJ_P0085598 protein_coding protein_coding MGP_WSBEiJ_T0085599.1 MGP_WSBEiJ_G0032209.1 mouse_genomes_project 7 132206862 132267688 + MGP_WSBEiJ_P0085599 protein_coding protein_coding MGP_WSBEiJ_T0085601.1 MGP_WSBEiJ_G0032209.1 mouse_genomes_project 7 132206866 132268129 + MGP_WSBEiJ_P0085601 protein_coding protein_coding MGP_WSBEiJ_T0085602.1 MGP_WSBEiJ_G0032209.1 mouse_genomes_project 7 132206911 132219753 + protein_coding processed_transcript MGP_WSBEiJ_T0085603.1 MGP_WSBEiJ_G0032209.1 mouse_genomes_project 7 132206926 132219995 + MGP_WSBEiJ_P0085603 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084278.1 MGP_WSBEiJ_G0031896.1 mouse_genomes_project 7 108436650 108440679 + MGP_WSBEiJ_P0084278 Smpd1 protein_coding protein_coding MGP_WSBEiJ_T0002171.1 MGP_WSBEiJ_G0002090.1 mouse_genomes_project 7 37012625 37013432 - TEC TEC MGP_WSBEiJ_T0081238.1 MGP_WSBEiJ_G0031076.1 mouse_genomes_project 7 26581074 26608518 - MGP_WSBEiJ_P0081238 protein_coding protein_coding MGP_WSBEiJ_T0081239.1 MGP_WSBEiJ_G0031076.1 mouse_genomes_project 7 26581076 26582017 - MGP_WSBEiJ_P0081239 protein_coding protein_coding MGP_WSBEiJ_T0084121.1 MGP_WSBEiJ_G0031777.1 mouse_genomes_project 7 105715040 105715997 + MGP_WSBEiJ_P0084121 Olfr572 protein_coding protein_coding MGP_WSBEiJ_T0085551.1 MGP_WSBEiJ_G0032200.1 mouse_genomes_project 7 132015325 132024551 - MGP_WSBEiJ_P0085551 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097101.1 MGP_WSBEiJ_G0035782.1 mouse_genomes_project 7 116546293 116546404 + Gm23662 rRNA rRNA MGP_WSBEiJ_T0082382.1 MGP_WSBEiJ_G0031349.1 mouse_genomes_project 7 45361771 45380051 + MGP_WSBEiJ_P0082382 Nosip protein_coding protein_coding MGP_WSBEiJ_T0082383.1 MGP_WSBEiJ_G0031349.1 mouse_genomes_project 7 45361771 45380051 + MGP_WSBEiJ_P0082383 Nosip protein_coding protein_coding MGP_WSBEiJ_T0084091.1 MGP_WSBEiJ_G0031750.1 mouse_genomes_project 7 105010901 105022727 - MGP_WSBEiJ_P0084091 Rhog protein_coding protein_coding MGP_WSBEiJ_T0084092.1 MGP_WSBEiJ_G0031750.1 mouse_genomes_project 7 105010901 105022692 - MGP_WSBEiJ_P0084092 Rhog protein_coding protein_coding MGP_WSBEiJ_T0086070.1 MGP_WSBEiJ_G0032334.1 mouse_genomes_project 7 145633405 145640179 + MGP_WSBEiJ_P0086070 Ric8a protein_coding protein_coding MGP_WSBEiJ_T0086071.1 MGP_WSBEiJ_G0032334.1 mouse_genomes_project 7 145633763 145634791 + Ric8a protein_coding retained_intron MGP_WSBEiJ_T0086072.1 MGP_WSBEiJ_G0032334.1 mouse_genomes_project 7 145633870 145635007 + Ric8a protein_coding processed_transcript MGP_WSBEiJ_T0086073.1 MGP_WSBEiJ_G0032334.1 mouse_genomes_project 7 145633890 145634991 + Ric8a protein_coding processed_transcript MGP_WSBEiJ_T0086074.1 MGP_WSBEiJ_G0032334.1 mouse_genomes_project 7 145634147 145639408 + Ric8a protein_coding retained_intron MGP_WSBEiJ_T0086075.1 MGP_WSBEiJ_G0032334.1 mouse_genomes_project 7 145634610 145636183 + Ric8a protein_coding processed_transcript MGP_WSBEiJ_T0086076.1 MGP_WSBEiJ_G0032334.1 mouse_genomes_project 7 145637090 145639592 + Ric8a protein_coding retained_intron MGP_WSBEiJ_T0086077.1 MGP_WSBEiJ_G0032334.1 mouse_genomes_project 7 145637621 145639068 + Ric8a protein_coding retained_intron MGP_WSBEiJ_T0083545.1 MGP_WSBEiJ_G0031629.1 mouse_genomes_project 7 88866768 88927568 - MGP_WSBEiJ_P0083545 Folh1 protein_coding protein_coding MGP_WSBEiJ_T0083546.1 MGP_WSBEiJ_G0031629.1 mouse_genomes_project 7 88866768 88927512 - MGP_WSBEiJ_P0083546 Folh1 protein_coding protein_coding MGP_WSBEiJ_T0008761.1 MGP_WSBEiJ_G0007081.1 mouse_genomes_project 7 73138609 73207173 + 1700011C11Rik lincRNA lincRNA MGP_WSBEiJ_T0080186.1 MGP_WSBEiJ_G0030749.1 mouse_genomes_project 7 2103978 2927726 - MGP_WSBEiJ_P0080186 Vmn1r56 protein_coding protein_coding MGP_WSBEiJ_T0084966.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126850939 126862833 + MGP_WSBEiJ_P0084966 Rbbp6 protein_coding protein_coding MGP_WSBEiJ_T0084967.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126857388 126889370 + MGP_WSBEiJ_P0084967 Rbbp6 protein_coding protein_coding MGP_WSBEiJ_T0084968.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126857524 126871210 + MGP_WSBEiJ_P0084968 Rbbp6 protein_coding protein_coding MGP_WSBEiJ_T0084969.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126857742 126889370 + MGP_WSBEiJ_P0084969 Rbbp6 protein_coding protein_coding MGP_WSBEiJ_T0084970.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126862464 126865586 + Rbbp6 protein_coding retained_intron MGP_WSBEiJ_T0084971.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126862682 126870381 + Rbbp6 protein_coding retained_intron MGP_WSBEiJ_T0084972.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126869328 126889372 + MGP_WSBEiJ_P0084972 Rbbp6 protein_coding protein_coding MGP_WSBEiJ_T0084973.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126869366 126872520 + Rbbp6 protein_coding retained_intron MGP_WSBEiJ_T0084974.1 MGP_WSBEiJ_G0032097.1 mouse_genomes_project 7 126876951 126879334 + Rbbp6 protein_coding retained_intron MGP_WSBEiJ_T0084678.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119665229 119786557 - MGP_WSBEiJ_P0084678 Plekha7 protein_coding protein_coding MGP_WSBEiJ_T0084679.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119665237 119863057 - MGP_WSBEiJ_P0084679 Plekha7 protein_coding protein_coding MGP_WSBEiJ_T0084680.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119665273 119674443 - MGP_WSBEiJ_P0084680 Plekha7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084681.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119667782 119731127 - MGP_WSBEiJ_P0084681 Plekha7 protein_coding protein_coding MGP_WSBEiJ_T0084682.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119675570 119731404 - MGP_WSBEiJ_P0084682 Plekha7 protein_coding protein_coding MGP_WSBEiJ_T0084683.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119676708 119863055 - MGP_WSBEiJ_P0084683 Plekha7 protein_coding protein_coding MGP_WSBEiJ_T0084684.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119676805 119786276 - MGP_WSBEiJ_P0084684 Plekha7 protein_coding protein_coding MGP_WSBEiJ_T0084685.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119684524 119699674 - MGP_WSBEiJ_P0084685 Plekha7 protein_coding protein_coding MGP_WSBEiJ_T0084686.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119697850 119786411 - Plekha7 protein_coding retained_intron MGP_WSBEiJ_T0084687.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119704967 119705903 - Plekha7 protein_coding retained_intron MGP_WSBEiJ_T0084688.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119706279 119726315 - Plekha7 protein_coding processed_transcript MGP_WSBEiJ_T0084689.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119712494 119808792 - MGP_WSBEiJ_P0084689 Plekha7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084690.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119712617 119728800 - Plekha7 protein_coding processed_transcript MGP_WSBEiJ_T0084691.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119717528 119862951 - MGP_WSBEiJ_P0084691 Plekha7 protein_coding protein_coding MGP_WSBEiJ_T0084692.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119718702 119862760 - Plekha7 protein_coding retained_intron MGP_WSBEiJ_T0084693.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119718748 119722476 - Plekha7 protein_coding retained_intron MGP_WSBEiJ_T0084694.1 MGP_WSBEiJ_G0032028.1 mouse_genomes_project 7 119723043 119814754 - Plekha7 protein_coding processed_transcript MGP_WSBEiJ_T0015303.1 MGP_WSBEiJ_G0013433.1 mouse_genomes_project 7 44506823 44507771 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002233.1 MGP_WSBEiJ_G0002151.1 mouse_genomes_project 7 81007546 81009428 + TEC TEC MGP_WSBEiJ_T0010741.1 MGP_WSBEiJ_G0008898.1 mouse_genomes_project 7 131607361 131607452 + miRNA miRNA MGP_WSBEiJ_T0083500.1 MGP_WSBEiJ_G0031600.1 mouse_genomes_project 7 85565720 85580917 - MGP_WSBEiJ_P0083500 Cfap161 protein_coding protein_coding MGP_WSBEiJ_T0083501.1 MGP_WSBEiJ_G0031600.1 mouse_genomes_project 7 85565828 85580110 - MGP_WSBEiJ_P0083501 Cfap161 protein_coding protein_coding MGP_WSBEiJ_T0083502.1 MGP_WSBEiJ_G0031600.1 mouse_genomes_project 7 85571363 85580202 - MGP_WSBEiJ_P0083502 Cfap161 protein_coding protein_coding MGP_WSBEiJ_T0080300.1 MGP_WSBEiJ_G0030809.1 mouse_genomes_project 7 10197052 10201453 + MGP_WSBEiJ_P0080300 Rps5 protein_coding protein_coding MGP_WSBEiJ_T0080301.1 MGP_WSBEiJ_G0030809.1 mouse_genomes_project 7 10197052 10201452 + MGP_WSBEiJ_P0080301 Rps5 protein_coding protein_coding MGP_WSBEiJ_T0080302.1 MGP_WSBEiJ_G0030809.1 mouse_genomes_project 7 10197080 10201261 + MGP_WSBEiJ_P0080302 Rps5 protein_coding protein_coding MGP_WSBEiJ_T0080303.1 MGP_WSBEiJ_G0030809.1 mouse_genomes_project 7 10197093 10200987 + Rps5 protein_coding retained_intron MGP_WSBEiJ_T0080304.1 MGP_WSBEiJ_G0030809.1 mouse_genomes_project 7 10197098 10198134 + Rps5 protein_coding retained_intron MGP_WSBEiJ_T0080305.1 MGP_WSBEiJ_G0030809.1 mouse_genomes_project 7 10197199 10201261 + MGP_WSBEiJ_P0080305 Rps5 protein_coding protein_coding MGP_WSBEiJ_T0080306.1 MGP_WSBEiJ_G0030809.1 mouse_genomes_project 7 10200804 10201451 + Rps5 protein_coding retained_intron MGP_WSBEiJ_T0084419.1 MGP_WSBEiJ_G0031952.1 mouse_genomes_project 7 111291538 111292636 - MGP_WSBEiJ_P0084419 protein_coding protein_coding MGP_WSBEiJ_T0080888.1 MGP_WSBEiJ_G0030989.1 mouse_genomes_project 7 22883684 22898514 + MGP_WSBEiJ_P0080888 BC049730 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086048.1 MGP_WSBEiJ_G0032319.1 mouse_genomes_project 7 145227517 145236109 - MGP_WSBEiJ_P0086048 Olfr536 protein_coding protein_coding MGP_WSBEiJ_T0015328.1 MGP_WSBEiJ_G0013458.1 mouse_genomes_project 7 68767168 68768173 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005155.1 MGP_WSBEiJ_G0004381.1 mouse_genomes_project 7 81242057 81244380 + antisense antisense MGP_WSBEiJ_T0005112.1 MGP_WSBEiJ_G0004350.1 mouse_genomes_project 7 29844254 29848469 + Gm4673 antisense antisense MGP_WSBEiJ_T0085320.1 MGP_WSBEiJ_G0032152.1 mouse_genomes_project 7 131057060 131072022 - MGP_WSBEiJ_P0085320 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084418.1 MGP_WSBEiJ_G0031951.1 mouse_genomes_project 7 111270097 111271163 + MGP_WSBEiJ_P0084418 Olfr483 protein_coding protein_coding MGP_WSBEiJ_T0010693.1 MGP_WSBEiJ_G0008850.1 mouse_genomes_project 7 54877696 54877804 - Gm27921 miRNA miRNA MGP_WSBEiJ_T0015367.1 MGP_WSBEiJ_G0013497.1 mouse_genomes_project 7 100068458 100069166 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082053.1 MGP_WSBEiJ_G0031254.1 mouse_genomes_project 7 40579295 40611728 + MGP_WSBEiJ_P0082053 Vstm2b protein_coding protein_coding MGP_WSBEiJ_T0082054.1 MGP_WSBEiJ_G0031254.1 mouse_genomes_project 7 40580502 40611102 + MGP_WSBEiJ_P0082054 Vstm2b protein_coding protein_coding MGP_WSBEiJ_T0082055.1 MGP_WSBEiJ_G0031254.1 mouse_genomes_project 7 40580556 40584006 + MGP_WSBEiJ_P0082055 Vstm2b protein_coding protein_coding MGP_WSBEiJ_T0082056.1 MGP_WSBEiJ_G0031254.1 mouse_genomes_project 7 40581350 40584019 + MGP_WSBEiJ_P0082056 Vstm2b protein_coding protein_coding MGP_WSBEiJ_T0081075.1 MGP_WSBEiJ_G0031031.1 mouse_genomes_project 7 24312739 24609959 + MGP_WSBEiJ_P0081075 protein_coding protein_coding MGP_WSBEiJ_T0083017.1 MGP_WSBEiJ_G0031507.1 mouse_genomes_project 7 68189685 68195653 + MGP_WSBEiJ_P0083017 Lysmd4 protein_coding protein_coding MGP_WSBEiJ_T0083018.1 MGP_WSBEiJ_G0031507.1 mouse_genomes_project 7 68189757 68195653 + MGP_WSBEiJ_P0083018 Lysmd4 protein_coding protein_coding MGP_WSBEiJ_T0100978.1 MGP_WSBEiJ_G0039435.1 mouse_genomes_project 7 9645904 9646595 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100972.1 MGP_WSBEiJ_G0039429.1 mouse_genomes_project 7 9260417 9260616 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008765.1 MGP_WSBEiJ_G0007085.1 mouse_genomes_project 7 74284447 74288767 - Gm6567 lincRNA lincRNA MGP_WSBEiJ_T0101012.1 MGP_WSBEiJ_G0039469.1 mouse_genomes_project 7 30240809 30241196 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015403.1 MGP_WSBEiJ_G0013533.1 mouse_genomes_project 7 129522943 129524277 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079964.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582142 585952 + MGP_WSBEiJ_P0079964 Rps9 protein_coding protein_coding MGP_WSBEiJ_T0079965.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582187 585950 + MGP_WSBEiJ_P0079965 Rps9 protein_coding protein_coding MGP_WSBEiJ_T0079966.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582190 583027 + Rps9 protein_coding retained_intron MGP_WSBEiJ_T0079967.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582191 582871 + MGP_WSBEiJ_P0079967 Rps9 protein_coding protein_coding MGP_WSBEiJ_T0079968.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582197 584489 + Rps9 protein_coding retained_intron MGP_WSBEiJ_T0079969.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582201 585915 + MGP_WSBEiJ_P0079969 Rps9 protein_coding protein_coding MGP_WSBEiJ_T0079970.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582469 585931 + MGP_WSBEiJ_P0079970 Rps9 protein_coding protein_coding MGP_WSBEiJ_T0079971.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582474 585440 + MGP_WSBEiJ_P0079971 Rps9 protein_coding protein_coding MGP_WSBEiJ_T0079972.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 582513 585949 + MGP_WSBEiJ_P0079972 Rps9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079973.1 MGP_WSBEiJ_G0030696.1 mouse_genomes_project 7 584675 585287 + Rps9 protein_coding retained_intron MGP_WSBEiJ_T0008682.1 MGP_WSBEiJ_G0007021.1 mouse_genomes_project 7 29790652 29820841 + Gm44662 lincRNA lincRNA MGP_WSBEiJ_T0086361.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147407569 147441629 + MGP_WSBEiJ_P0086361 Lsp1 protein_coding protein_coding MGP_WSBEiJ_T0086362.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147407606 147441629 + MGP_WSBEiJ_P0086362 Lsp1 protein_coding protein_coding MGP_WSBEiJ_T0086363.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147407624 147441365 + MGP_WSBEiJ_P0086363 Lsp1 protein_coding protein_coding MGP_WSBEiJ_T0086364.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147418607 147441361 + MGP_WSBEiJ_P0086364 Lsp1 protein_coding protein_coding MGP_WSBEiJ_T0086365.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147418636 147435131 + Lsp1 protein_coding retained_intron MGP_WSBEiJ_T0086366.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147418915 147441362 + MGP_WSBEiJ_P0086366 Lsp1 protein_coding protein_coding MGP_WSBEiJ_T0086367.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147421758 147433264 + Lsp1 protein_coding processed_transcript MGP_WSBEiJ_T0086368.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147423777 147441629 + Lsp1 protein_coding processed_transcript MGP_WSBEiJ_T0086369.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147430018 147436743 + Lsp1 protein_coding processed_transcript MGP_WSBEiJ_T0086370.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147430163 147433240 + Lsp1 protein_coding processed_transcript MGP_WSBEiJ_T0086371.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147435776 147437184 + Lsp1 protein_coding retained_intron MGP_WSBEiJ_T0086372.1 MGP_WSBEiJ_G0032391.1 mouse_genomes_project 7 147436572 147441279 + Lsp1 protein_coding retained_intron MGP_WSBEiJ_T0081177.1 MGP_WSBEiJ_G0031059.1 mouse_genomes_project 7 25871983 25913971 - MGP_WSBEiJ_P0081177 Sptbn4 protein_coding protein_coding MGP_WSBEiJ_T0081178.1 MGP_WSBEiJ_G0031059.1 mouse_genomes_project 7 25871983 25916737 - MGP_WSBEiJ_P0081178 Sptbn4 protein_coding protein_coding MGP_WSBEiJ_T0081179.1 MGP_WSBEiJ_G0031059.1 mouse_genomes_project 7 25871983 25916382 - MGP_WSBEiJ_P0081179 Sptbn4 protein_coding protein_coding MGP_WSBEiJ_T0081180.1 MGP_WSBEiJ_G0031059.1 mouse_genomes_project 7 25871983 25970122 - MGP_WSBEiJ_P0081180 Sptbn4 protein_coding protein_coding MGP_WSBEiJ_T0081181.1 MGP_WSBEiJ_G0031059.1 mouse_genomes_project 7 25871987 25971193 - MGP_WSBEiJ_P0081181 Sptbn4 protein_coding protein_coding MGP_WSBEiJ_T0081182.1 MGP_WSBEiJ_G0031059.1 mouse_genomes_project 7 25955129 25971193 - MGP_WSBEiJ_P0081182 Sptbn4 protein_coding protein_coding MGP_WSBEiJ_T0081183.1 MGP_WSBEiJ_G0031059.1 mouse_genomes_project 7 25969475 25970040 - Sptbn4 protein_coding processed_transcript MGP_WSBEiJ_T0097460.1 MGP_WSBEiJ_G0036130.1 mouse_genomes_project 7 119832800 119834044 - Gm44867 sense_intronic sense_intronic MGP_WSBEiJ_T0097461.1 MGP_WSBEiJ_G0036130.1 mouse_genomes_project 7 119832800 119834186 - Gm44867 sense_intronic sense_intronic MGP_WSBEiJ_T0084265.1 MGP_WSBEiJ_G0031891.1 mouse_genomes_project 7 108232053 108263910 - MGP_WSBEiJ_P0084265 Fam160a2 protein_coding protein_coding MGP_WSBEiJ_T0084266.1 MGP_WSBEiJ_G0031891.1 mouse_genomes_project 7 108232053 108263932 - MGP_WSBEiJ_P0084266 Fam160a2 protein_coding protein_coding MGP_WSBEiJ_T0084268.1 MGP_WSBEiJ_G0031891.1 mouse_genomes_project 7 108239464 108263932 - MGP_WSBEiJ_P0084268 Fam160a2 protein_coding protein_coding MGP_WSBEiJ_T0084269.1 MGP_WSBEiJ_G0031891.1 mouse_genomes_project 7 108239464 108263863 - MGP_WSBEiJ_P0084269 Fam160a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084270.1 MGP_WSBEiJ_G0031891.1 mouse_genomes_project 7 108239465 108263886 - MGP_WSBEiJ_P0084270 Fam160a2 protein_coding protein_coding MGP_WSBEiJ_T0084271.1 MGP_WSBEiJ_G0031891.1 mouse_genomes_project 7 108239465 108263889 - MGP_WSBEiJ_P0084271 Fam160a2 protein_coding protein_coding MGP_WSBEiJ_T0084272.1 MGP_WSBEiJ_G0031891.1 mouse_genomes_project 7 108239930 108242836 - Fam160a2 protein_coding retained_intron MGP_WSBEiJ_T0084273.1 MGP_WSBEiJ_G0031891.1 mouse_genomes_project 7 108246242 108249966 - Fam160a2 protein_coding retained_intron MGP_WSBEiJ_T0084169.1 MGP_WSBEiJ_G0031823.1 mouse_genomes_project 7 106701300 106702548 - MGP_WSBEiJ_P0084169 Hbb-bh2 protein_coding protein_coding MGP_WSBEiJ_T0085087.1 MGP_WSBEiJ_G0032116.1 mouse_genomes_project 7 130396593 130411347 - MGP_WSBEiJ_P0085087 Nfatc2ip protein_coding protein_coding MGP_WSBEiJ_T0085088.1 MGP_WSBEiJ_G0032116.1 mouse_genomes_project 7 130398617 130405185 - MGP_WSBEiJ_P0085088 Nfatc2ip protein_coding protein_coding MGP_WSBEiJ_T0080391.1 MGP_WSBEiJ_G0030838.1 mouse_genomes_project 7 13308283 13309496 + MGP_WSBEiJ_P0080391 protein_coding protein_coding MGP_WSBEiJ_T0082364.1 MGP_WSBEiJ_G0031339.1 mouse_genomes_project 7 45224546 45244068 + MGP_WSBEiJ_P0082364 Tsks protein_coding protein_coding MGP_WSBEiJ_T0082365.1 MGP_WSBEiJ_G0031339.1 mouse_genomes_project 7 45224546 45244068 + MGP_WSBEiJ_P0082365 Tsks protein_coding protein_coding MGP_WSBEiJ_T0083918.1 MGP_WSBEiJ_G0031723.1 mouse_genomes_project 7 103611575 103640399 - MGP_WSBEiJ_P0083918 P2ry6 protein_coding protein_coding MGP_WSBEiJ_T0084241.1 MGP_WSBEiJ_G0031867.1 mouse_genomes_project 7 107603307 107613254 - MGP_WSBEiJ_P0084241 Usp17la protein_coding protein_coding MGP_WSBEiJ_T0015326.1 MGP_WSBEiJ_G0013456.1 mouse_genomes_project 7 66311966 66312285 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085650.1 MGP_WSBEiJ_G0032220.1 mouse_genomes_project 7 132545317 132594089 - MGP_WSBEiJ_P0085650 Rgs10 protein_coding protein_coding MGP_WSBEiJ_T0085651.1 MGP_WSBEiJ_G0032220.1 mouse_genomes_project 7 132545581 132566914 - Rgs10 protein_coding processed_transcript MGP_WSBEiJ_T0085652.1 MGP_WSBEiJ_G0032220.1 mouse_genomes_project 7 132545697 132549314 - Rgs10 protein_coding processed_transcript MGP_WSBEiJ_T0085653.1 MGP_WSBEiJ_G0032220.1 mouse_genomes_project 7 132562075 132577707 - Rgs10 protein_coding retained_intron MGP_WSBEiJ_T0085654.1 MGP_WSBEiJ_G0032220.1 mouse_genomes_project 7 132576138 132594079 - MGP_WSBEiJ_P0085654 Rgs10 protein_coding protein_coding MGP_WSBEiJ_T0085655.1 MGP_WSBEiJ_G0032220.1 mouse_genomes_project 7 132576409 132594674 - MGP_WSBEiJ_P0085655 Rgs10 protein_coding protein_coding MGP_WSBEiJ_T0084413.1 MGP_WSBEiJ_G0031946.1 mouse_genomes_project 7 111160320 111162966 + MGP_WSBEiJ_P0084413 protein_coding protein_coding MGP_WSBEiJ_T0084153.1 MGP_WSBEiJ_G0031807.1 mouse_genomes_project 7 106371838 106372792 - MGP_WSBEiJ_P0084153 Olfr616 protein_coding protein_coding MGP_WSBEiJ_T0080378.1 MGP_WSBEiJ_G0030829.1 mouse_genomes_project 7 11220412 11241847 - MGP_WSBEiJ_P0080378 protein_coding protein_coding MGP_WSBEiJ_T0081687.1 MGP_WSBEiJ_G0031183.1 mouse_genomes_project 7 29479600 29489816 - MGP_WSBEiJ_P0081687 Rbm42 protein_coding protein_coding MGP_WSBEiJ_T0081688.1 MGP_WSBEiJ_G0031183.1 mouse_genomes_project 7 29479605 29489643 - MGP_WSBEiJ_P0081688 Rbm42 protein_coding protein_coding MGP_WSBEiJ_T0081689.1 MGP_WSBEiJ_G0031183.1 mouse_genomes_project 7 29483603 29485490 - Rbm42 protein_coding retained_intron MGP_WSBEiJ_T0005230.1 MGP_WSBEiJ_G0004434.1 mouse_genomes_project 7 146480242 146483925 - Gm16982 antisense antisense MGP_WSBEiJ_T0008671.1 MGP_WSBEiJ_G0007011.1 mouse_genomes_project 7 23189387 23192681 + Gm44970 lincRNA lincRNA MGP_WSBEiJ_T0080892.1 MGP_WSBEiJ_G0030991.1 mouse_genomes_project 7 22936816 22955303 - MGP_WSBEiJ_P0080892 Cd177 protein_coding protein_coding MGP_WSBEiJ_T0080893.1 MGP_WSBEiJ_G0030991.1 mouse_genomes_project 7 22937784 22944669 - Cd177 protein_coding retained_intron MGP_WSBEiJ_T0015227.1 MGP_WSBEiJ_G0013357.1 mouse_genomes_project 7 11023418 11023632 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084267.1 MGP_WSBEiJ_G0031892.1 mouse_genomes_project 7 108235952 108239142 + MGP_WSBEiJ_P0084267 Gm5901 protein_coding protein_coding MGP_WSBEiJ_T0083283.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81862678 81896084 - Rccd1 protein_coding retained_intron MGP_WSBEiJ_T0083298.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81891026 81900411 - MGP_WSBEiJ_P0083298 Rccd1 protein_coding protein_coding MGP_WSBEiJ_T0083299.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81891986 81900112 - Rccd1 protein_coding retained_intron MGP_WSBEiJ_T0083300.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81891986 81900431 - MGP_WSBEiJ_P0083300 Rccd1 protein_coding protein_coding MGP_WSBEiJ_T0083301.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81892730 81900441 - Rccd1 protein_coding retained_intron MGP_WSBEiJ_T0083302.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81892732 81895190 - Rccd1 protein_coding retained_intron MGP_WSBEiJ_T0083303.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81896901 81900107 - MGP_WSBEiJ_P0083303 Rccd1 protein_coding protein_coding MGP_WSBEiJ_T0083304.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81897213 81900140 - Rccd1 protein_coding retained_intron MGP_WSBEiJ_T0083305.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81898606 81900121 - Rccd1 protein_coding retained_intron MGP_WSBEiJ_T0083306.1 MGP_WSBEiJ_G0031559.1 mouse_genomes_project 7 81899756 81900388 - Rccd1 protein_coding processed_transcript MGP_WSBEiJ_T0085642.1 MGP_WSBEiJ_G0032219.1 mouse_genomes_project 7 132434761 132438231 - BC017158 protein_coding retained_intron MGP_WSBEiJ_T0085643.1 MGP_WSBEiJ_G0032219.1 mouse_genomes_project 7 132434761 132461805 - MGP_WSBEiJ_P0085643 BC017158 protein_coding protein_coding MGP_WSBEiJ_T0085644.1 MGP_WSBEiJ_G0032219.1 mouse_genomes_project 7 132435489 132461743 - BC017158 protein_coding retained_intron MGP_WSBEiJ_T0085645.1 MGP_WSBEiJ_G0032219.1 mouse_genomes_project 7 132435489 132461744 - BC017158 protein_coding retained_intron MGP_WSBEiJ_T0085646.1 MGP_WSBEiJ_G0032219.1 mouse_genomes_project 7 132435708 132461730 - MGP_WSBEiJ_P0085646 BC017158 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085647.1 MGP_WSBEiJ_G0032219.1 mouse_genomes_project 7 132439347 132461209 - BC017158 protein_coding retained_intron MGP_WSBEiJ_T0085648.1 MGP_WSBEiJ_G0032219.1 mouse_genomes_project 7 132439683 132452350 - BC017158 protein_coding retained_intron MGP_WSBEiJ_T0085649.1 MGP_WSBEiJ_G0032219.1 mouse_genomes_project 7 132451609 132454260 - MGP_WSBEiJ_P0085649 BC017158 protein_coding protein_coding MGP_WSBEiJ_T0017742.1 MGP_WSBEiJ_G0015084.1 mouse_genomes_project 7 43878055 43988141 - 2310002F09Rik processed_transcript antisense MGP_WSBEiJ_T0017743.1 MGP_WSBEiJ_G0015084.1 mouse_genomes_project 7 43932279 43935608 - 2310002F09Rik processed_transcript antisense MGP_WSBEiJ_T0017744.1 MGP_WSBEiJ_G0015084.1 mouse_genomes_project 7 43987019 43988154 - 2310002F09Rik processed_transcript antisense MGP_WSBEiJ_T0085788.1 MGP_WSBEiJ_G0032244.1 mouse_genomes_project 7 135861588 135863647 + MGP_WSBEiJ_P0085788 Hmx3 protein_coding protein_coding MGP_WSBEiJ_T0098502.1 MGP_WSBEiJ_G0037165.1 mouse_genomes_project 7 112307889 112307996 - Gm25450 snRNA snRNA MGP_WSBEiJ_T0008672.1 MGP_WSBEiJ_G0007012.1 mouse_genomes_project 7 23406549 23410716 + D930028M14Rik lincRNA lincRNA MGP_WSBEiJ_T0008673.1 MGP_WSBEiJ_G0007012.1 mouse_genomes_project 7 23409157 23410308 + D930028M14Rik lincRNA lincRNA MGP_WSBEiJ_T0084178.1 MGP_WSBEiJ_G0031832.1 mouse_genomes_project 7 106839866 106841251 + MGP_WSBEiJ_P0084178 protein_coding protein_coding MGP_WSBEiJ_T0098480.1 MGP_WSBEiJ_G0037143.1 mouse_genomes_project 7 52917853 52918009 - Gm22211 snRNA snRNA MGP_WSBEiJ_T0005149.1 MGP_WSBEiJ_G0004377.1 mouse_genomes_project 7 79685864 79686988 + 4921513I08Rik antisense antisense MGP_WSBEiJ_T0082520.1 MGP_WSBEiJ_G0031383.1 mouse_genomes_project 7 45924606 45946176 + MGP_WSBEiJ_P0082520 Bcat2 protein_coding protein_coding MGP_WSBEiJ_T0082521.1 MGP_WSBEiJ_G0031383.1 mouse_genomes_project 7 45924803 45943227 + Bcat2 protein_coding retained_intron MGP_WSBEiJ_T0082522.1 MGP_WSBEiJ_G0031383.1 mouse_genomes_project 7 45924826 45946176 + MGP_WSBEiJ_P0082522 Bcat2 protein_coding protein_coding MGP_WSBEiJ_T0082523.1 MGP_WSBEiJ_G0031383.1 mouse_genomes_project 7 45925449 45946176 + MGP_WSBEiJ_P0082523 Bcat2 protein_coding protein_coding MGP_WSBEiJ_T0082524.1 MGP_WSBEiJ_G0031383.1 mouse_genomes_project 7 45927322 45946176 + MGP_WSBEiJ_P0082524 Bcat2 protein_coding protein_coding MGP_WSBEiJ_T0082525.1 MGP_WSBEiJ_G0031383.1 mouse_genomes_project 7 45929528 45941493 + MGP_WSBEiJ_P0082525 Bcat2 protein_coding protein_coding MGP_WSBEiJ_T0082526.1 MGP_WSBEiJ_G0031383.1 mouse_genomes_project 7 45929650 45941612 + Bcat2 protein_coding retained_intron MGP_WSBEiJ_T0084479.1 MGP_WSBEiJ_G0031985.1 mouse_genomes_project 7 112993364 112998175 - MGP_WSBEiJ_P0084479 Ascl3 protein_coding protein_coding MGP_WSBEiJ_T0099754.1 MGP_WSBEiJ_G0038417.1 mouse_genomes_project 7 131646388 131646518 + Snora30 snoRNA snoRNA MGP_WSBEiJ_T0017740.1 MGP_WSBEiJ_G0015082.1 mouse_genomes_project 7 28350623 28355901 - A330087D11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0015420.1 MGP_WSBEiJ_G0013550.1 mouse_genomes_project 7 133252640 133253398 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099728.1 MGP_WSBEiJ_G0038391.1 mouse_genomes_project 7 71055840 71055969 - Gm24120 snoRNA snoRNA MGP_WSBEiJ_T0084168.1 MGP_WSBEiJ_G0031822.1 mouse_genomes_project 7 106671575 106689325 - MGP_WSBEiJ_P0084168 protein_coding protein_coding MGP_WSBEiJ_T0080548.1 MGP_WSBEiJ_G0030881.1 mouse_genomes_project 7 15575736 15578757 + MGP_WSBEiJ_P0080548 Ceacam14 protein_coding protein_coding MGP_WSBEiJ_T0002223.1 MGP_WSBEiJ_G0002141.1 mouse_genomes_project 7 78076118 78077695 - TEC TEC MGP_WSBEiJ_T0080262.1 MGP_WSBEiJ_G0030788.1 mouse_genomes_project 7 8921115 8922036 - MGP_WSBEiJ_P0080262 Vmn1r72 protein_coding protein_coding MGP_WSBEiJ_T0010646.1 MGP_WSBEiJ_G0008803.1 mouse_genomes_project 7 97674 97757 + Mir290a miRNA miRNA MGP_WSBEiJ_T0080986.1 MGP_WSBEiJ_G0031008.1 mouse_genomes_project 7 23567582 23569994 - MGP_WSBEiJ_P0080986 Pafah1b3 protein_coding protein_coding MGP_WSBEiJ_T0080987.1 MGP_WSBEiJ_G0031008.1 mouse_genomes_project 7 23567590 23569244 - Pafah1b3 protein_coding retained_intron MGP_WSBEiJ_T0080988.1 MGP_WSBEiJ_G0031008.1 mouse_genomes_project 7 23567900 23570424 - MGP_WSBEiJ_P0080988 Pafah1b3 protein_coding protein_coding MGP_WSBEiJ_T0080989.1 MGP_WSBEiJ_G0031008.1 mouse_genomes_project 7 23568507 23570479 - MGP_WSBEiJ_P0080989 Pafah1b3 protein_coding protein_coding MGP_WSBEiJ_T0080990.1 MGP_WSBEiJ_G0031008.1 mouse_genomes_project 7 23569161 23570463 - Pafah1b3 protein_coding retained_intron MGP_WSBEiJ_T0080991.1 MGP_WSBEiJ_G0031008.1 mouse_genomes_project 7 23569415 23570476 - Pafah1b3 protein_coding processed_transcript MGP_WSBEiJ_T0081546.1 MGP_WSBEiJ_G0031156.1 mouse_genomes_project 7 29056587 29101376 - MGP_WSBEiJ_P0081546 Wdr62 protein_coding protein_coding MGP_WSBEiJ_T0081547.1 MGP_WSBEiJ_G0031156.1 mouse_genomes_project 7 29056587 29080087 - MGP_WSBEiJ_P0081547 Wdr62 protein_coding protein_coding MGP_WSBEiJ_T0081548.1 MGP_WSBEiJ_G0031156.1 mouse_genomes_project 7 29056587 29101353 - MGP_WSBEiJ_P0081548 Wdr62 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081549.1 MGP_WSBEiJ_G0031156.1 mouse_genomes_project 7 29056592 29057333 - Wdr62 protein_coding processed_transcript MGP_WSBEiJ_T0081550.1 MGP_WSBEiJ_G0031156.1 mouse_genomes_project 7 29058146 29058728 - MGP_WSBEiJ_P0081550 Wdr62 protein_coding protein_coding MGP_WSBEiJ_T0081551.1 MGP_WSBEiJ_G0031156.1 mouse_genomes_project 7 29061864 29068294 - Wdr62 protein_coding retained_intron MGP_WSBEiJ_T0081552.1 MGP_WSBEiJ_G0031156.1 mouse_genomes_project 7 29066240 29066984 - Wdr62 protein_coding retained_intron MGP_WSBEiJ_T0085045.1 MGP_WSBEiJ_G0032111.1 mouse_genomes_project 7 129865781 130068563 - MGP_WSBEiJ_P0085045 Gsg1l protein_coding protein_coding MGP_WSBEiJ_T0084421.1 MGP_WSBEiJ_G0031954.1 mouse_genomes_project 7 111471545 111472490 - MGP_WSBEiJ_P0084421 protein_coding protein_coding MGP_WSBEiJ_T0011481.1 MGP_WSBEiJ_G0009638.1 mouse_genomes_project 7 29132566 29132937 + Gm24757 misc_RNA misc_RNA MGP_WSBEiJ_T0080555.1 MGP_WSBEiJ_G0030885.1 mouse_genomes_project 7 15942818 15948151 + MGP_WSBEiJ_P0080555 Igfl3 protein_coding protein_coding MGP_WSBEiJ_T0015237.1 MGP_WSBEiJ_G0013367.1 mouse_genomes_project 7 14764843 14765308 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083389.1 MGP_WSBEiJ_G0031571.1 mouse_genomes_project 7 82527024 82529163 - Nmb protein_coding retained_intron MGP_WSBEiJ_T0083390.1 MGP_WSBEiJ_G0031571.1 mouse_genomes_project 7 82527025 82529846 - MGP_WSBEiJ_P0083390 Nmb protein_coding protein_coding MGP_WSBEiJ_T0083391.1 MGP_WSBEiJ_G0031571.1 mouse_genomes_project 7 82527029 82529144 - Nmb protein_coding retained_intron MGP_WSBEiJ_T0083392.1 MGP_WSBEiJ_G0031571.1 mouse_genomes_project 7 82527029 82529830 - MGP_WSBEiJ_P0083392 Nmb protein_coding protein_coding MGP_WSBEiJ_T0005237.1 MGP_WSBEiJ_G0004438.1 mouse_genomes_project 7 148215046 148296153 - Kcnq1ot1 antisense antisense MGP_WSBEiJ_T0081012.1 MGP_WSBEiJ_G0031018.1 mouse_genomes_project 7 23955768 23961914 + MGP_WSBEiJ_P0081012 Atp5sl protein_coding unknown_likely_coding MGP_WSBEiJ_T0081013.1 MGP_WSBEiJ_G0031018.1 mouse_genomes_project 7 23955774 23961910 + MGP_WSBEiJ_P0081013 Atp5sl protein_coding protein_coding MGP_WSBEiJ_T0081014.1 MGP_WSBEiJ_G0031018.1 mouse_genomes_project 7 23955784 23956900 + Atp5sl protein_coding retained_intron MGP_WSBEiJ_T0081015.1 MGP_WSBEiJ_G0031018.1 mouse_genomes_project 7 23955853 23961907 + MGP_WSBEiJ_P0081015 Atp5sl protein_coding protein_coding MGP_WSBEiJ_T0081016.1 MGP_WSBEiJ_G0031018.1 mouse_genomes_project 7 23956897 23958767 + Atp5sl protein_coding retained_intron MGP_WSBEiJ_T0081017.1 MGP_WSBEiJ_G0031018.1 mouse_genomes_project 7 23957256 23960441 + MGP_WSBEiJ_P0081017 Atp5sl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081018.1 MGP_WSBEiJ_G0031018.1 mouse_genomes_project 7 23957263 23958364 + Atp5sl protein_coding processed_transcript MGP_WSBEiJ_T0005148.1 MGP_WSBEiJ_G0004376.1 mouse_genomes_project 7 75680271 75699403 + Gm7580 antisense antisense MGP_WSBEiJ_T0082745.1 MGP_WSBEiJ_G0031448.1 mouse_genomes_project 7 50368666 50373985 - MGP_WSBEiJ_P0082745 Dbx1 protein_coding protein_coding MGP_WSBEiJ_T0081915.1 MGP_WSBEiJ_G0031228.1 mouse_genomes_project 7 33978951 34141204 - MGP_WSBEiJ_P0081915 Chst8 protein_coding protein_coding MGP_WSBEiJ_T0081916.1 MGP_WSBEiJ_G0031228.1 mouse_genomes_project 7 33979240 34141204 - MGP_WSBEiJ_P0081916 Chst8 protein_coding protein_coding MGP_WSBEiJ_T0081917.1 MGP_WSBEiJ_G0031228.1 mouse_genomes_project 7 33980300 34141229 - Chst8 protein_coding processed_transcript MGP_WSBEiJ_T0081918.1 MGP_WSBEiJ_G0031228.1 mouse_genomes_project 7 34000852 34004013 - Chst8 protein_coding processed_transcript MGP_WSBEiJ_T0081919.1 MGP_WSBEiJ_G0031228.1 mouse_genomes_project 7 34001654 34141190 - Chst8 protein_coding processed_transcript MGP_WSBEiJ_T0101047.1 MGP_WSBEiJ_G0039504.1 mouse_genomes_project 7 47791546 47792464 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015391.1 MGP_WSBEiJ_G0013521.1 mouse_genomes_project 7 113847622 113848215 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080788.1 MGP_WSBEiJ_G0030959.1 mouse_genomes_project 7 21841661 21848218 + MGP_WSBEiJ_P0080788 Vmn1r173 protein_coding protein_coding MGP_WSBEiJ_T0015256.1 MGP_WSBEiJ_G0013386.1 mouse_genomes_project 7 24160163 24160451 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096846.1 MGP_WSBEiJ_G0035527.1 mouse_genomes_project 7 111376081 111377199 + pseudogene pseudogene MGP_WSBEiJ_T0080443.1 MGP_WSBEiJ_G0030852.1 mouse_genomes_project 7 13820142 13845442 - MGP_WSBEiJ_P0080443 C5ar2 protein_coding protein_coding MGP_WSBEiJ_T0080444.1 MGP_WSBEiJ_G0030852.1 mouse_genomes_project 7 13820142 13847278 - MGP_WSBEiJ_P0080444 C5ar2 protein_coding protein_coding MGP_WSBEiJ_T0080912.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23134283 23156212 + MGP_WSBEiJ_P0080912 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080913.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23134408 23156209 + MGP_WSBEiJ_P0080913 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080914.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23134422 23156209 + MGP_WSBEiJ_P0080914 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080915.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23134427 23156214 + MGP_WSBEiJ_P0080915 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080916.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23134436 23135755 + Arhgef1 protein_coding processed_transcript MGP_WSBEiJ_T0080917.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23134442 23139256 + MGP_WSBEiJ_P0080917 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080918.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23134446 23141324 + Arhgef1 protein_coding retained_intron MGP_WSBEiJ_T0080919.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23135726 23146036 + MGP_WSBEiJ_P0080919 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080920.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23135728 23156209 + Arhgef1 protein_coding retained_intron MGP_WSBEiJ_T0080921.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23135775 23145185 + MGP_WSBEiJ_P0080921 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080922.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23135777 23156212 + MGP_WSBEiJ_P0080922 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080923.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23135810 23152711 + MGP_WSBEiJ_P0080923 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080924.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23139010 23144725 + MGP_WSBEiJ_P0080924 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080925.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23145201 23148294 + Arhgef1 protein_coding retained_intron MGP_WSBEiJ_T0080926.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23146732 23155726 + MGP_WSBEiJ_P0080926 Arhgef1 protein_coding protein_coding MGP_WSBEiJ_T0080927.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23149103 23151999 + Arhgef1 protein_coding retained_intron MGP_WSBEiJ_T0080928.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23152867 23154467 + Arhgef1 protein_coding retained_intron MGP_WSBEiJ_T0080929.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23152972 23155105 + Arhgef1 protein_coding retained_intron MGP_WSBEiJ_T0080930.1 MGP_WSBEiJ_G0030997.1 mouse_genomes_project 7 23152982 23155556 + Arhgef1 protein_coding processed_transcript MGP_WSBEiJ_T0080163.1 MGP_WSBEiJ_G0030736.1 mouse_genomes_project 7 1959062 1966931 - MGP_WSBEiJ_P0080163 Fiz1 protein_coding protein_coding MGP_WSBEiJ_T0080164.1 MGP_WSBEiJ_G0030736.1 mouse_genomes_project 7 1959062 1965262 - MGP_WSBEiJ_P0080164 Fiz1 protein_coding protein_coding MGP_WSBEiJ_T0080165.1 MGP_WSBEiJ_G0030736.1 mouse_genomes_project 7 1959062 1967375 - MGP_WSBEiJ_P0080165 Fiz1 protein_coding protein_coding MGP_WSBEiJ_T0085195.1 MGP_WSBEiJ_G0032134.1 mouse_genomes_project 7 130805164 130811149 + MGP_WSBEiJ_P0085195 Mapk3 protein_coding protein_coding MGP_WSBEiJ_T0085196.1 MGP_WSBEiJ_G0032134.1 mouse_genomes_project 7 130805164 130812123 + MGP_WSBEiJ_P0085196 Mapk3 protein_coding protein_coding MGP_WSBEiJ_T0085198.1 MGP_WSBEiJ_G0032134.1 mouse_genomes_project 7 130805965 130807313 + Mapk3 protein_coding retained_intron MGP_WSBEiJ_T0085199.1 MGP_WSBEiJ_G0032134.1 mouse_genomes_project 7 130806139 130809463 + Mapk3 protein_coding processed_transcript MGP_WSBEiJ_T0085200.1 MGP_WSBEiJ_G0032134.1 mouse_genomes_project 7 130806902 130812123 + MGP_WSBEiJ_P0085200 Mapk3 protein_coding protein_coding MGP_WSBEiJ_T0085201.1 MGP_WSBEiJ_G0032134.1 mouse_genomes_project 7 130807054 130810876 + MGP_WSBEiJ_P0085201 Mapk3 protein_coding protein_coding MGP_WSBEiJ_T0085202.1 MGP_WSBEiJ_G0032134.1 mouse_genomes_project 7 130809580 130810664 + Mapk3 protein_coding retained_intron MGP_WSBEiJ_T0083360.1 MGP_WSBEiJ_G0031567.1 mouse_genomes_project 7 82178789 82291096 - MGP_WSBEiJ_P0083360 Crtc3 protein_coding protein_coding MGP_WSBEiJ_T0083361.1 MGP_WSBEiJ_G0031567.1 mouse_genomes_project 7 82184978 82205174 - MGP_WSBEiJ_P0083361 Crtc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083362.1 MGP_WSBEiJ_G0031567.1 mouse_genomes_project 7 82187868 82193684 - Crtc3 protein_coding retained_intron MGP_WSBEiJ_T0083363.1 MGP_WSBEiJ_G0031567.1 mouse_genomes_project 7 82187930 82227106 - MGP_WSBEiJ_P0083363 Crtc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083364.1 MGP_WSBEiJ_G0031567.1 mouse_genomes_project 7 82213330 82227187 - Crtc3 protein_coding retained_intron MGP_WSBEiJ_T0083365.1 MGP_WSBEiJ_G0031567.1 mouse_genomes_project 7 82274501 82291096 - Crtc3 protein_coding retained_intron MGP_WSBEiJ_T0098470.1 MGP_WSBEiJ_G0037133.1 mouse_genomes_project 7 17403944 17404083 - Gm23099 snRNA snRNA MGP_WSBEiJ_T0084100.1 MGP_WSBEiJ_G0031758.1 mouse_genomes_project 7 105341420 105348951 - MGP_WSBEiJ_P0084100 Trim21 protein_coding protein_coding MGP_WSBEiJ_T0084101.1 MGP_WSBEiJ_G0031758.1 mouse_genomes_project 7 105341420 105348951 - MGP_WSBEiJ_P0084101 Trim21 protein_coding protein_coding MGP_WSBEiJ_T0082931.1 MGP_WSBEiJ_G0031491.1 mouse_genomes_project 7 65640238 66061194 - MGP_WSBEiJ_P0082931 Fam189a1 protein_coding protein_coding MGP_WSBEiJ_T0082932.1 MGP_WSBEiJ_G0031491.1 mouse_genomes_project 7 65640260 65658639 - Fam189a1 protein_coding processed_transcript MGP_WSBEiJ_T0082933.1 MGP_WSBEiJ_G0031491.1 mouse_genomes_project 7 65652713 65812524 - MGP_WSBEiJ_P0082933 Fam189a1 protein_coding protein_coding MGP_WSBEiJ_T0082934.1 MGP_WSBEiJ_G0031491.1 mouse_genomes_project 7 65671675 66061040 - MGP_WSBEiJ_P0082934 Fam189a1 protein_coding protein_coding MGP_WSBEiJ_T0082935.1 MGP_WSBEiJ_G0031491.1 mouse_genomes_project 7 65707037 65742159 - Fam189a1 protein_coding retained_intron MGP_WSBEiJ_T0084433.1 MGP_WSBEiJ_G0031966.1 mouse_genomes_project 7 111864819 111865764 + MGP_WSBEiJ_P0084433 Olfr510 protein_coding protein_coding MGP_WSBEiJ_T0002158.1 MGP_WSBEiJ_G0002077.1 mouse_genomes_project 7 30119236 30119994 + TEC TEC MGP_WSBEiJ_T0015223.1 MGP_WSBEiJ_G0013353.1 mouse_genomes_project 7 10751817 10752607 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086401.1 MGP_WSBEiJ_G0032394.1 mouse_genomes_project 7 147484297 147492228 + Mrpl23 protein_coding processed_transcript MGP_WSBEiJ_T0086402.1 MGP_WSBEiJ_G0032394.1 mouse_genomes_project 7 147484510 147492238 + MGP_WSBEiJ_P0086402 Mrpl23 protein_coding protein_coding MGP_WSBEiJ_T0086403.1 MGP_WSBEiJ_G0032394.1 mouse_genomes_project 7 147486017 147488780 + Mrpl23 protein_coding retained_intron MGP_WSBEiJ_T0086404.1 MGP_WSBEiJ_G0032394.1 mouse_genomes_project 7 147487598 147489401 + Mrpl23 protein_coding retained_intron MGP_WSBEiJ_T0080229.1 MGP_WSBEiJ_G0030767.1 mouse_genomes_project 7 3628684 3629629 + MGP_WSBEiJ_P0080229 Olfr1336 protein_coding protein_coding MGP_WSBEiJ_T0082475.1 MGP_WSBEiJ_G0031375.1 mouse_genomes_project 7 45797340 45799017 - MGP_WSBEiJ_P0082475 Ftl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082476.1 MGP_WSBEiJ_G0031375.1 mouse_genomes_project 7 45797346 45799270 - MGP_WSBEiJ_P0082476 Ftl1 protein_coding protein_coding MGP_WSBEiJ_T0082477.1 MGP_WSBEiJ_G0031375.1 mouse_genomes_project 7 45797347 45798198 - Ftl1 protein_coding processed_transcript MGP_WSBEiJ_T0082478.1 MGP_WSBEiJ_G0031375.1 mouse_genomes_project 7 45797347 45798820 - Ftl1 protein_coding processed_transcript MGP_WSBEiJ_T0082479.1 MGP_WSBEiJ_G0031375.1 mouse_genomes_project 7 45797367 45798862 - Ftl1 protein_coding retained_intron MGP_WSBEiJ_T0080692.1 MGP_WSBEiJ_G0030925.1 mouse_genomes_project 7 17407908 17444068 + MGP_WSBEiJ_P0080692 Exoc3l2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0080693.1 MGP_WSBEiJ_G0030925.1 mouse_genomes_project 7 17436147 17444062 + MGP_WSBEiJ_P0080693 Exoc3l2 protein_coding protein_coding MGP_WSBEiJ_T0002271.1 MGP_WSBEiJ_G0002189.1 mouse_genomes_project 7 132130403 132133734 + TEC TEC MGP_WSBEiJ_T0005145.1 MGP_WSBEiJ_G0004374.1 mouse_genomes_project 7 74522185 74591445 - A730056A06Rik antisense antisense MGP_WSBEiJ_T0005146.1 MGP_WSBEiJ_G0004374.1 mouse_genomes_project 7 74524431 74591454 - A730056A06Rik antisense antisense MGP_WSBEiJ_T0083535.1 MGP_WSBEiJ_G0031620.1 mouse_genomes_project 7 88494342 88495382 - MGP_WSBEiJ_P0083535 Olfr303 protein_coding protein_coding MGP_WSBEiJ_T0099753.1 MGP_WSBEiJ_G0038416.1 mouse_genomes_project 7 128441944 128442087 + Gm23168 snoRNA snoRNA MGP_WSBEiJ_T0082716.1 MGP_WSBEiJ_G0031443.1 mouse_genomes_project 7 49342355 49343364 - MGP_WSBEiJ_P0082716 Mrgprb3 protein_coding protein_coding MGP_WSBEiJ_T0081599.1 MGP_WSBEiJ_G0031167.1 mouse_genomes_project 7 29254078 29266288 - MGP_WSBEiJ_P0081599 Aplp1 protein_coding protein_coding MGP_WSBEiJ_T0101115.1 MGP_WSBEiJ_G0039572.1 mouse_genomes_project 7 107510244 107510616 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080665.1 MGP_WSBEiJ_G0030918.1 mouse_genomes_project 7 17296168 17298800 - MGP_WSBEiJ_P0080665 Cd3eap protein_coding protein_coding MGP_WSBEiJ_T0080666.1 MGP_WSBEiJ_G0030918.1 mouse_genomes_project 7 17298158 17298802 - Cd3eap protein_coding retained_intron MGP_WSBEiJ_T0101051.1 MGP_WSBEiJ_G0039508.1 mouse_genomes_project 7 48126736 48742535 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0101066.1 MGP_WSBEiJ_G0039523.1 mouse_genomes_project 7 49316355 49317139 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084188.1 MGP_WSBEiJ_G0031842.1 mouse_genomes_project 7 106995862 106997777 - MGP_WSBEiJ_P0084188 4931431F19Rik protein_coding protein_coding MGP_WSBEiJ_T0082437.1 MGP_WSBEiJ_G0031367.1 mouse_genomes_project 7 45664206 45693678 - MGP_WSBEiJ_P0082437 Ppfia3 protein_coding protein_coding MGP_WSBEiJ_T0082438.1 MGP_WSBEiJ_G0031367.1 mouse_genomes_project 7 45664207 45665852 - Ppfia3 protein_coding processed_transcript MGP_WSBEiJ_T0082439.1 MGP_WSBEiJ_G0031367.1 mouse_genomes_project 7 45664207 45693983 - MGP_WSBEiJ_P0082439 Ppfia3 protein_coding protein_coding MGP_WSBEiJ_T0082440.1 MGP_WSBEiJ_G0031367.1 mouse_genomes_project 7 45664353 45693983 - Ppfia3 protein_coding retained_intron MGP_WSBEiJ_T0082441.1 MGP_WSBEiJ_G0031367.1 mouse_genomes_project 7 45664355 45687089 - MGP_WSBEiJ_P0082441 Ppfia3 protein_coding protein_coding MGP_WSBEiJ_T0082442.1 MGP_WSBEiJ_G0031367.1 mouse_genomes_project 7 45664361 45665843 - Ppfia3 protein_coding processed_transcript MGP_WSBEiJ_T0082443.1 MGP_WSBEiJ_G0031367.1 mouse_genomes_project 7 45664902 45666241 - Ppfia3 protein_coding retained_intron MGP_WSBEiJ_T0010651.1 MGP_WSBEiJ_G0008808.1 mouse_genomes_project 7 98529 98606 + Mir291b miRNA miRNA MGP_WSBEiJ_T0085909.1 MGP_WSBEiJ_G0032276.1 mouse_genomes_project 7 141760622 141883791 - MGP_WSBEiJ_P0085909 Ebf3 protein_coding protein_coding MGP_WSBEiJ_T0085910.1 MGP_WSBEiJ_G0032276.1 mouse_genomes_project 7 141760622 141883791 - MGP_WSBEiJ_P0085910 Ebf3 protein_coding protein_coding MGP_WSBEiJ_T0085911.1 MGP_WSBEiJ_G0032276.1 mouse_genomes_project 7 141760622 141883791 - MGP_WSBEiJ_P0085911 Ebf3 protein_coding protein_coding MGP_WSBEiJ_T0085912.1 MGP_WSBEiJ_G0032276.1 mouse_genomes_project 7 141761641 141883760 - MGP_WSBEiJ_P0085912 Ebf3 protein_coding protein_coding MGP_WSBEiJ_T0080333.1 MGP_WSBEiJ_G0030817.1 mouse_genomes_project 7 10329663 10332052 - Ube2m protein_coding processed_transcript MGP_WSBEiJ_T0080334.1 MGP_WSBEiJ_G0030817.1 mouse_genomes_project 7 10329733 10332032 - MGP_WSBEiJ_P0080334 Ube2m protein_coding protein_coding MGP_WSBEiJ_T0080335.1 MGP_WSBEiJ_G0030817.1 mouse_genomes_project 7 10329992 10331053 - MGP_WSBEiJ_P0080335 Ube2m protein_coding protein_coding MGP_WSBEiJ_T0080336.1 MGP_WSBEiJ_G0030817.1 mouse_genomes_project 7 10330018 10332134 - MGP_WSBEiJ_P0080336 Ube2m protein_coding protein_coding MGP_WSBEiJ_T0080337.1 MGP_WSBEiJ_G0030817.1 mouse_genomes_project 7 10330380 10332151 - Ube2m protein_coding retained_intron MGP_WSBEiJ_T0080338.1 MGP_WSBEiJ_G0030817.1 mouse_genomes_project 7 10330846 10332676 - MGP_WSBEiJ_P0080338 Ube2m protein_coding protein_coding MGP_WSBEiJ_T0080339.1 MGP_WSBEiJ_G0030817.1 mouse_genomes_project 7 10330970 10331926 - Ube2m protein_coding processed_transcript MGP_WSBEiJ_T0002198.1 MGP_WSBEiJ_G0002117.1 mouse_genomes_project 7 65087293 65087729 - TEC TEC MGP_WSBEiJ_T0084489.1 MGP_WSBEiJ_G0031989.1 mouse_genomes_project 7 113170764 113173684 - Dennd5a protein_coding retained_intron MGP_WSBEiJ_T0084490.1 MGP_WSBEiJ_G0031989.1 mouse_genomes_project 7 113170764 113244546 - MGP_WSBEiJ_P0084490 Dennd5a protein_coding protein_coding MGP_WSBEiJ_T0084491.1 MGP_WSBEiJ_G0031989.1 mouse_genomes_project 7 113170764 113245236 - MGP_WSBEiJ_P0084491 Dennd5a protein_coding protein_coding MGP_WSBEiJ_T0084492.1 MGP_WSBEiJ_G0031989.1 mouse_genomes_project 7 113173364 113174541 - Dennd5a protein_coding retained_intron MGP_WSBEiJ_T0084493.1 MGP_WSBEiJ_G0031989.1 mouse_genomes_project 7 113176805 113178198 - Dennd5a protein_coding retained_intron MGP_WSBEiJ_T0084494.1 MGP_WSBEiJ_G0031989.1 mouse_genomes_project 7 113186950 113201806 - Dennd5a protein_coding retained_intron MGP_WSBEiJ_T0084495.1 MGP_WSBEiJ_G0031989.1 mouse_genomes_project 7 113202408 113206193 - Dennd5a protein_coding processed_transcript MGP_WSBEiJ_T0084496.1 MGP_WSBEiJ_G0031989.1 mouse_genomes_project 7 113217083 113244469 - Dennd5a protein_coding processed_transcript MGP_WSBEiJ_T0008737.1 MGP_WSBEiJ_G0007064.1 mouse_genomes_project 7 66116524 66117080 - Gm45214 lincRNA lincRNA MGP_WSBEiJ_T0008738.1 MGP_WSBEiJ_G0007064.1 mouse_genomes_project 7 66116527 66117140 - Gm45214 lincRNA lincRNA MGP_WSBEiJ_T0011492.1 MGP_WSBEiJ_G0009649.1 mouse_genomes_project 7 106048459 106048780 + Gm23973 misc_RNA misc_RNA MGP_WSBEiJ_T0010728.1 MGP_WSBEiJ_G0008885.1 mouse_genomes_project 7 103556557 103556661 - Mir3102 miRNA miRNA MGP_WSBEiJ_T0017728.1 MGP_WSBEiJ_G0015074.1 mouse_genomes_project 7 2003150 2009536 - Gm15510 processed_transcript processed_transcript MGP_WSBEiJ_T0017729.1 MGP_WSBEiJ_G0015074.1 mouse_genomes_project 7 2003151 2009451 - Gm15510 processed_transcript processed_transcript MGP_WSBEiJ_T0080042.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1394203 1414294 - MGP_WSBEiJ_P0080042 Ppp1r12c protein_coding protein_coding MGP_WSBEiJ_T0080043.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1394203 1414613 - MGP_WSBEiJ_P0080043 Ppp1r12c protein_coding protein_coding MGP_WSBEiJ_T0080044.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1394206 1396716 - Ppp1r12c protein_coding retained_intron MGP_WSBEiJ_T0080045.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1394271 1395318 - Ppp1r12c protein_coding processed_transcript MGP_WSBEiJ_T0080046.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1396317 1397183 - Ppp1r12c protein_coding retained_intron MGP_WSBEiJ_T0080047.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1396623 1397998 - Ppp1r12c protein_coding retained_intron MGP_WSBEiJ_T0080048.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1396700 1398392 - Ppp1r12c protein_coding retained_intron MGP_WSBEiJ_T0080049.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1397889 1398616 - Ppp1r12c protein_coding retained_intron MGP_WSBEiJ_T0080050.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1398834 1399418 - Ppp1r12c protein_coding retained_intron MGP_WSBEiJ_T0080051.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1402114 1414597 - Ppp1r12c protein_coding retained_intron MGP_WSBEiJ_T0080052.1 MGP_WSBEiJ_G0030708.1 mouse_genomes_project 7 1402753 1414462 - MGP_WSBEiJ_P0080052 Ppp1r12c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084846.1 MGP_WSBEiJ_G0032066.1 mouse_genomes_project 7 123939857 123985933 + Abca14 protein_coding processed_transcript MGP_WSBEiJ_T0084847.1 MGP_WSBEiJ_G0032066.1 mouse_genomes_project 7 123939860 124070196 + MGP_WSBEiJ_P0084847 Abca14 protein_coding protein_coding MGP_WSBEiJ_T0084848.1 MGP_WSBEiJ_G0032066.1 mouse_genomes_project 7 123939900 123948795 + Abca14 protein_coding retained_intron MGP_WSBEiJ_T0084849.1 MGP_WSBEiJ_G0032066.1 mouse_genomes_project 7 123939903 123952105 + Abca14 protein_coding processed_transcript MGP_WSBEiJ_T0002210.1 MGP_WSBEiJ_G0002129.1 mouse_genomes_project 7 74754439 74755911 - TEC TEC MGP_WSBEiJ_T0015336.1 MGP_WSBEiJ_G0013466.1 mouse_genomes_project 7 76163574 76163704 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084005.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104627562 104647402 + MGP_WSBEiJ_P0084005 Anapc15 protein_coding protein_coding MGP_WSBEiJ_T0084006.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104643886 104645884 + Anapc15 protein_coding processed_transcript MGP_WSBEiJ_T0084007.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104644196 104647399 + MGP_WSBEiJ_P0084007 Anapc15 protein_coding protein_coding MGP_WSBEiJ_T0084008.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104644264 104646086 + Anapc15 protein_coding retained_intron MGP_WSBEiJ_T0084009.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104644272 104647339 + MGP_WSBEiJ_P0084009 Anapc15 protein_coding protein_coding MGP_WSBEiJ_T0084010.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104644273 104649498 + MGP_WSBEiJ_P0084010 Anapc15 protein_coding protein_coding MGP_WSBEiJ_T0084011.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104644284 104647397 + Anapc15 protein_coding retained_intron MGP_WSBEiJ_T0084012.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104644719 104645887 + Anapc15 protein_coding processed_transcript MGP_WSBEiJ_T0084013.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104644817 104646901 + MGP_WSBEiJ_P0084013 Anapc15 protein_coding protein_coding MGP_WSBEiJ_T0084014.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104645244 104646437 + Anapc15 protein_coding retained_intron MGP_WSBEiJ_T0084015.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104645590 104649704 + MGP_WSBEiJ_P0084015 Anapc15 protein_coding protein_coding MGP_WSBEiJ_T0084016.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104645653 104649498 + MGP_WSBEiJ_P0084016 Anapc15 protein_coding protein_coding MGP_WSBEiJ_T0084018.1 MGP_WSBEiJ_G0031735.1 mouse_genomes_project 7 104646850 104647403 + Anapc15 protein_coding processed_transcript MGP_WSBEiJ_T0010665.1 MGP_WSBEiJ_G0008822.1 mouse_genomes_project 7 23205611 23205677 - Mir7046 miRNA miRNA MGP_WSBEiJ_T0086049.1 MGP_WSBEiJ_G0032320.1 mouse_genomes_project 7 145267757 145268714 + MGP_WSBEiJ_P0086049 protein_coding protein_coding MGP_WSBEiJ_T0082591.1 MGP_WSBEiJ_G0031404.1 mouse_genomes_project 7 46249779 46251258 + Kdelr1 protein_coding processed_transcript MGP_WSBEiJ_T0082592.1 MGP_WSBEiJ_G0031404.1 mouse_genomes_project 7 46249903 46259904 + MGP_WSBEiJ_P0082592 Kdelr1 protein_coding protein_coding MGP_WSBEiJ_T0082593.1 MGP_WSBEiJ_G0031404.1 mouse_genomes_project 7 46258329 46260245 + Kdelr1 protein_coding processed_transcript MGP_WSBEiJ_T0005560.1 MGP_WSBEiJ_G0004677.1 mouse_genomes_project 7 119999988 120000738 + AV356131 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0084921.1 MGP_WSBEiJ_G0032088.1 mouse_genomes_project 7 125900671 125915711 + MGP_WSBEiJ_P0084921 Ubfd1 protein_coding protein_coding MGP_WSBEiJ_T0084922.1 MGP_WSBEiJ_G0032088.1 mouse_genomes_project 7 125900704 125911146 + Ubfd1 protein_coding retained_intron MGP_WSBEiJ_T0084923.1 MGP_WSBEiJ_G0032088.1 mouse_genomes_project 7 125900936 125904924 + Ubfd1 protein_coding retained_intron MGP_WSBEiJ_T0084924.1 MGP_WSBEiJ_G0032088.1 mouse_genomes_project 7 125900943 125902476 + Ubfd1 protein_coding processed_transcript MGP_WSBEiJ_T0084925.1 MGP_WSBEiJ_G0032088.1 mouse_genomes_project 7 125902395 125912126 + MGP_WSBEiJ_P0084925 Ubfd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082332.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45127480 45133896 + MGP_WSBEiJ_P0082332 Akt1s1 protein_coding protein_coding MGP_WSBEiJ_T0082333.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45127833 45133905 + Akt1s1 protein_coding retained_intron MGP_WSBEiJ_T0082334.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45128070 45131434 + MGP_WSBEiJ_P0082334 Akt1s1 protein_coding protein_coding MGP_WSBEiJ_T0082335.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45128118 45133224 + MGP_WSBEiJ_P0082335 Akt1s1 protein_coding protein_coding MGP_WSBEiJ_T0082336.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45128496 45132524 + MGP_WSBEiJ_P0082336 Akt1s1 protein_coding protein_coding MGP_WSBEiJ_T0082337.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45128885 45131351 + MGP_WSBEiJ_P0082337 Akt1s1 protein_coding protein_coding MGP_WSBEiJ_T0082338.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45129465 45133908 + MGP_WSBEiJ_P0082338 Akt1s1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082339.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45129981 45131126 + MGP_WSBEiJ_P0082339 Akt1s1 protein_coding protein_coding MGP_WSBEiJ_T0082340.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45131058 45133174 + MGP_WSBEiJ_P0082340 Akt1s1 protein_coding protein_coding MGP_WSBEiJ_T0082341.1 MGP_WSBEiJ_G0031333.1 mouse_genomes_project 7 45131407 45133132 + Akt1s1 protein_coding retained_intron MGP_WSBEiJ_T0080556.1 MGP_WSBEiJ_G0030886.1 mouse_genomes_project 7 16016540 16040441 + MGP_WSBEiJ_P0080556 Mill1 protein_coding protein_coding MGP_WSBEiJ_T0015417.1 MGP_WSBEiJ_G0013547.1 mouse_genomes_project 7 132879881 132880165 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005174.1 MGP_WSBEiJ_G0004393.1 mouse_genomes_project 7 98793200 98795680 - Gm15412 antisense antisense MGP_WSBEiJ_T0085998.1 MGP_WSBEiJ_G0032296.1 mouse_genomes_project 7 144688951 144715681 - MGP_WSBEiJ_P0085998 Tubgcp2 protein_coding protein_coding MGP_WSBEiJ_T0010694.1 MGP_WSBEiJ_G0008851.1 mouse_genomes_project 7 58455878 58455980 + Mir6389 miRNA miRNA MGP_WSBEiJ_T0080894.1 MGP_WSBEiJ_G0030992.1 mouse_genomes_project 7 22992598 23006660 + MGP_WSBEiJ_P0080894 Ceacam10 protein_coding protein_coding MGP_WSBEiJ_T0080895.1 MGP_WSBEiJ_G0030992.1 mouse_genomes_project 7 22992602 23006656 + MGP_WSBEiJ_P0080895 Ceacam10 protein_coding protein_coding MGP_WSBEiJ_T0080896.1 MGP_WSBEiJ_G0030992.1 mouse_genomes_project 7 22992651 23006661 + MGP_WSBEiJ_P0080896 Ceacam10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082370.1 MGP_WSBEiJ_G0031344.1 mouse_genomes_project 7 45288241 45293832 + MGP_WSBEiJ_P0082370 Irf3 protein_coding protein_coding MGP_WSBEiJ_T0082371.1 MGP_WSBEiJ_G0031344.1 mouse_genomes_project 7 45288541 45293376 + MGP_WSBEiJ_P0082371 Irf3 protein_coding protein_coding MGP_WSBEiJ_T0081861.1 MGP_WSBEiJ_G0031220.1 mouse_genomes_project 7 33382423 33407640 - MGP_WSBEiJ_P0081861 Wtip protein_coding protein_coding MGP_WSBEiJ_T0081862.1 MGP_WSBEiJ_G0031220.1 mouse_genomes_project 7 33383045 33402409 - Wtip protein_coding processed_transcript MGP_WSBEiJ_T0081863.1 MGP_WSBEiJ_G0031220.1 mouse_genomes_project 7 33383096 33391927 - Wtip protein_coding retained_intron MGP_WSBEiJ_T0081864.1 MGP_WSBEiJ_G0031220.1 mouse_genomes_project 7 33383106 33407190 - MGP_WSBEiJ_P0081864 Wtip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002273.1 MGP_WSBEiJ_G0002191.1 mouse_genomes_project 7 132915461 132916457 - TEC TEC MGP_WSBEiJ_T0082633.1 MGP_WSBEiJ_G0031416.1 mouse_genomes_project 7 46811955 46852061 + MGP_WSBEiJ_P0082633 Kcnc1 protein_coding protein_coding MGP_WSBEiJ_T0082634.1 MGP_WSBEiJ_G0031416.1 mouse_genomes_project 7 46813106 46857083 + MGP_WSBEiJ_P0082634 Kcnc1 protein_coding protein_coding MGP_WSBEiJ_T0082635.1 MGP_WSBEiJ_G0031416.1 mouse_genomes_project 7 46840428 46846529 + Kcnc1 protein_coding processed_transcript MGP_WSBEiJ_T0085566.1 MGP_WSBEiJ_G0032204.1 mouse_genomes_project 7 132054714 132059103 - MGP_WSBEiJ_P0085566 Prss8 protein_coding protein_coding MGP_WSBEiJ_T0085567.1 MGP_WSBEiJ_G0032204.1 mouse_genomes_project 7 132054714 132059103 - MGP_WSBEiJ_P0085567 Prss8 protein_coding protein_coding MGP_WSBEiJ_T0085568.1 MGP_WSBEiJ_G0032204.1 mouse_genomes_project 7 132055760 132059094 - MGP_WSBEiJ_P0085568 Prss8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082444.1 MGP_WSBEiJ_G0031368.1 mouse_genomes_project 7 45694852 45697547 - MGP_WSBEiJ_P0082444 Lin7b protein_coding protein_coding MGP_WSBEiJ_T0082445.1 MGP_WSBEiJ_G0031368.1 mouse_genomes_project 7 45694854 45695564 - Lin7b protein_coding retained_intron MGP_WSBEiJ_T0082446.1 MGP_WSBEiJ_G0031368.1 mouse_genomes_project 7 45696171 45697279 - Lin7b protein_coding retained_intron MGP_WSBEiJ_T0082447.1 MGP_WSBEiJ_G0031368.1 mouse_genomes_project 7 45696225 45697149 - Lin7b protein_coding retained_intron MGP_WSBEiJ_T0082448.1 MGP_WSBEiJ_G0031368.1 mouse_genomes_project 7 45696524 45697310 - Lin7b protein_coding retained_intron MGP_WSBEiJ_T0086210.1 MGP_WSBEiJ_G0032365.1 mouse_genomes_project 7 146258363 146264586 - Pddc1 protein_coding retained_intron MGP_WSBEiJ_T0086211.1 MGP_WSBEiJ_G0032365.1 mouse_genomes_project 7 146258412 146259599 - Pddc1 protein_coding retained_intron MGP_WSBEiJ_T0086212.1 MGP_WSBEiJ_G0032365.1 mouse_genomes_project 7 146258412 146264632 - MGP_WSBEiJ_P0086212 Pddc1 protein_coding protein_coding MGP_WSBEiJ_T0086213.1 MGP_WSBEiJ_G0032365.1 mouse_genomes_project 7 146258414 146264574 - Pddc1 protein_coding retained_intron MGP_WSBEiJ_T0086214.1 MGP_WSBEiJ_G0032365.1 mouse_genomes_project 7 146261110 146264561 - Pddc1 protein_coding retained_intron MGP_WSBEiJ_T0086215.1 MGP_WSBEiJ_G0032365.1 mouse_genomes_project 7 146261961 146264572 - Pddc1 protein_coding retained_intron MGP_WSBEiJ_T0085322.1 MGP_WSBEiJ_G0032153.1 mouse_genomes_project 7 131070570 131072890 - MGP_WSBEiJ_P0085322 Pagr1a protein_coding protein_coding MGP_WSBEiJ_T0085325.1 MGP_WSBEiJ_G0032153.1 mouse_genomes_project 7 131070712 131072858 - MGP_WSBEiJ_P0085325 Pagr1a protein_coding protein_coding MGP_WSBEiJ_T0085326.1 MGP_WSBEiJ_G0032153.1 mouse_genomes_project 7 131070914 131072218 - MGP_WSBEiJ_P0085326 Pagr1a protein_coding protein_coding MGP_WSBEiJ_T0085327.1 MGP_WSBEiJ_G0032153.1 mouse_genomes_project 7 131070943 131072855 - MGP_WSBEiJ_P0085327 Pagr1a protein_coding protein_coding MGP_WSBEiJ_T0080701.1 MGP_WSBEiJ_G0030928.1 mouse_genomes_project 7 17469976 17476301 + MGP_WSBEiJ_P0080701 Nkpd1 protein_coding protein_coding MGP_WSBEiJ_T0008869.1 MGP_WSBEiJ_G0007149.1 mouse_genomes_project 7 129395426 129396546 - Gm44766 lincRNA lincRNA MGP_WSBEiJ_T0005163.1 MGP_WSBEiJ_G0004387.1 mouse_genomes_project 7 82359536 82368066 + Gm44649 antisense antisense MGP_WSBEiJ_T0005164.1 MGP_WSBEiJ_G0004387.1 mouse_genomes_project 7 82359559 82360856 + Gm44649 antisense antisense MGP_WSBEiJ_T0086333.1 MGP_WSBEiJ_G0032385.1 mouse_genomes_project 7 147094867 147095528 - MGP_WSBEiJ_P0086333 protein_coding protein_coding MGP_WSBEiJ_T0002214.1 MGP_WSBEiJ_G0002132.1 mouse_genomes_project 7 75045584 75046274 - TEC TEC MGP_WSBEiJ_T0085349.1 MGP_WSBEiJ_G0032158.1 mouse_genomes_project 7 131105879 131108399 - MGP_WSBEiJ_P0085349 Zg16 protein_coding protein_coding MGP_WSBEiJ_T0085350.1 MGP_WSBEiJ_G0032158.1 mouse_genomes_project 7 131105879 131107701 - MGP_WSBEiJ_P0085350 Zg16 protein_coding protein_coding MGP_WSBEiJ_T0080237.1 MGP_WSBEiJ_G0030773.1 mouse_genomes_project 7 3877988 3904499 - MGP_WSBEiJ_P0080237 Peg3 protein_coding protein_coding MGP_WSBEiJ_T0080238.1 MGP_WSBEiJ_G0030773.1 mouse_genomes_project 7 3883493 3904497 - MGP_WSBEiJ_P0080238 Peg3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080239.1 MGP_WSBEiJ_G0030773.1 mouse_genomes_project 7 3885794 3897316 - MGP_WSBEiJ_P0080239 Peg3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080240.1 MGP_WSBEiJ_G0030773.1 mouse_genomes_project 7 3896033 3904497 - Peg3 protein_coding retained_intron MGP_WSBEiJ_T0008886.1 MGP_WSBEiJ_G0007158.1 mouse_genomes_project 7 131549704 131554606 + Gm45184 lincRNA lincRNA MGP_WSBEiJ_T0083547.1 MGP_WSBEiJ_G0031630.1 mouse_genomes_project 7 88952082 88964433 + MGP_WSBEiJ_P0083547 protein_coding protein_coding MGP_WSBEiJ_T0005241.1 MGP_WSBEiJ_G0004442.1 mouse_genomes_project 7 149634144 149648298 + Faddos antisense antisense MGP_WSBEiJ_T0080997.1 MGP_WSBEiJ_G0031011.1 mouse_genomes_project 7 23590722 23649936 + MGP_WSBEiJ_P0080997 Megf8 protein_coding protein_coding MGP_WSBEiJ_T0080998.1 MGP_WSBEiJ_G0031011.1 mouse_genomes_project 7 23628315 23649933 + Megf8 protein_coding retained_intron MGP_WSBEiJ_T0015277.1 MGP_WSBEiJ_G0013407.1 mouse_genomes_project 7 39198699 39199293 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015329.1 MGP_WSBEiJ_G0013459.1 mouse_genomes_project 7 70266366 70267369 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101014.1 MGP_WSBEiJ_G0039471.1 mouse_genomes_project 7 30333101 30334368 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081539.1 MGP_WSBEiJ_G0031154.1 mouse_genomes_project 7 29048823 29049898 + MGP_WSBEiJ_P0081539 Polr2i protein_coding protein_coding MGP_WSBEiJ_T0081540.1 MGP_WSBEiJ_G0031154.1 mouse_genomes_project 7 29048834 29049889 + MGP_WSBEiJ_P0081540 Polr2i protein_coding protein_coding MGP_WSBEiJ_T0081541.1 MGP_WSBEiJ_G0031154.1 mouse_genomes_project 7 29048844 29049886 + Polr2i protein_coding retained_intron MGP_WSBEiJ_T0081542.1 MGP_WSBEiJ_G0031154.1 mouse_genomes_project 7 29048852 29049828 + Polr2i protein_coding retained_intron MGP_WSBEiJ_T0081543.1 MGP_WSBEiJ_G0031154.1 mouse_genomes_project 7 29049105 29049890 + Polr2i protein_coding processed_transcript MGP_WSBEiJ_T0081544.1 MGP_WSBEiJ_G0031154.1 mouse_genomes_project 7 29049434 29049885 + Polr2i protein_coding retained_intron MGP_WSBEiJ_T0081498.1 MGP_WSBEiJ_G0031140.1 mouse_genomes_project 7 28723444 28745808 - MGP_WSBEiJ_P0081498 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081499.1 MGP_WSBEiJ_G0031140.1 mouse_genomes_project 7 28723468 28736186 - MGP_WSBEiJ_P0081499 protein_coding protein_coding MGP_WSBEiJ_T0081500.1 MGP_WSBEiJ_G0031140.1 mouse_genomes_project 7 28724123 28745802 - MGP_WSBEiJ_P0081500 protein_coding protein_coding MGP_WSBEiJ_T0081501.1 MGP_WSBEiJ_G0031140.1 mouse_genomes_project 7 28730365 28745804 - protein_coding processed_transcript MGP_WSBEiJ_T0098471.1 MGP_WSBEiJ_G0037134.1 mouse_genomes_project 7 26712237 26712343 + Gm24356 snRNA snRNA MGP_WSBEiJ_T0083374.1 MGP_WSBEiJ_G0031569.1 mouse_genomes_project 7 82484626 82499706 + MGP_WSBEiJ_P0083374 Zscan2 protein_coding protein_coding MGP_WSBEiJ_T0083375.1 MGP_WSBEiJ_G0031569.1 mouse_genomes_project 7 82484657 82488241 + MGP_WSBEiJ_P0083375 Zscan2 protein_coding protein_coding MGP_WSBEiJ_T0083376.1 MGP_WSBEiJ_G0031569.1 mouse_genomes_project 7 82484659 82500625 + MGP_WSBEiJ_P0083376 Zscan2 protein_coding protein_coding MGP_WSBEiJ_T0083377.1 MGP_WSBEiJ_G0031569.1 mouse_genomes_project 7 82485819 82501296 + MGP_WSBEiJ_P0083377 Zscan2 protein_coding protein_coding MGP_WSBEiJ_T0083378.1 MGP_WSBEiJ_G0031569.1 mouse_genomes_project 7 82487672 82499835 + MGP_WSBEiJ_P0083378 Zscan2 protein_coding protein_coding MGP_WSBEiJ_T0082483.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45830329 45868209 + MGP_WSBEiJ_P0082483 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082484.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45830330 45867656 + MGP_WSBEiJ_P0082484 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082485.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45830431 45867658 + MGP_WSBEiJ_P0082485 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082495.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45858994 45867870 + MGP_WSBEiJ_P0082495 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082496.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45859012 45867663 + MGP_WSBEiJ_P0082496 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082497.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45859869 45861976 + MGP_WSBEiJ_P0082497 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082498.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45859890 45867658 + MGP_WSBEiJ_P0082498 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082499.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45859894 45863231 + MGP_WSBEiJ_P0082499 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082500.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45859925 45868914 + MGP_WSBEiJ_P0082500 Tulp2 protein_coding protein_coding MGP_WSBEiJ_T0082501.1 MGP_WSBEiJ_G0031378.1 mouse_genomes_project 7 45861096 45861609 + Tulp2 protein_coding processed_transcript MGP_WSBEiJ_T0002159.1 MGP_WSBEiJ_G0002078.1 mouse_genomes_project 7 33529553 33530655 - TEC TEC MGP_WSBEiJ_T0010737.1 MGP_WSBEiJ_G0008894.1 mouse_genomes_project 7 130381503 130381578 - Mir7058 miRNA miRNA MGP_WSBEiJ_T0100987.1 MGP_WSBEiJ_G0039444.1 mouse_genomes_project 7 11930537 11930979 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100980.1 MGP_WSBEiJ_G0039437.1 mouse_genomes_project 7 10550767 10550968 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084370.1 MGP_WSBEiJ_G0031911.1 mouse_genomes_project 7 109756485 109757433 - MGP_WSBEiJ_P0084370 Olfr694 protein_coding protein_coding MGP_WSBEiJ_T0084130.1 MGP_WSBEiJ_G0031785.1 mouse_genomes_project 7 105876053 105877803 + MGP_WSBEiJ_P0084130 protein_coding protein_coding MGP_WSBEiJ_T0015221.1 MGP_WSBEiJ_G0013351.1 mouse_genomes_project 7 9845226 9846677 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002263.1 MGP_WSBEiJ_G0002181.1 mouse_genomes_project 7 130992019 130993769 + TEC TEC MGP_WSBEiJ_T0082965.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66981357 66997140 + Snrpa1 protein_coding processed_transcript MGP_WSBEiJ_T0082966.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66982479 66991716 + Snrpa1 protein_coding processed_transcript MGP_WSBEiJ_T0082967.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66982518 66997384 + MGP_WSBEiJ_P0082967 Snrpa1 protein_coding protein_coding MGP_WSBEiJ_T0082968.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66982713 66997173 + Snrpa1 protein_coding processed_transcript MGP_WSBEiJ_T0082969.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66982725 66997377 + MGP_WSBEiJ_P0082969 Snrpa1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082970.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66982745 66993802 + Snrpa1 protein_coding retained_intron MGP_WSBEiJ_T0082971.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66982784 66997167 + Snrpa1 protein_coding processed_transcript MGP_WSBEiJ_T0082972.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66982956 66984338 + Snrpa1 protein_coding processed_transcript MGP_WSBEiJ_T0082973.1 MGP_WSBEiJ_G0031498.1 mouse_genomes_project 7 66991029 66991713 + Snrpa1 protein_coding retained_intron MGP_WSBEiJ_T0010712.1 MGP_WSBEiJ_G0008869.1 mouse_genomes_project 7 62892175 62892263 - Gm24923 miRNA miRNA MGP_WSBEiJ_T0081510.1 MGP_WSBEiJ_G0031145.1 mouse_genomes_project 7 28855754 28894409 - MGP_WSBEiJ_P0081510 Gm26920 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080185.1 MGP_WSBEiJ_G0030748.1 mouse_genomes_project 7 2081278 2082291 - MGP_WSBEiJ_P0080185 Rasl2-9 protein_coding protein_coding MGP_WSBEiJ_T0100999.1 MGP_WSBEiJ_G0039456.1 mouse_genomes_project 7 13206718 13206973 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081325.1 MGP_WSBEiJ_G0031103.1 mouse_genomes_project 7 27395797 27422459 + MGP_WSBEiJ_P0081325 Fbxo17 protein_coding protein_coding MGP_WSBEiJ_T0081326.1 MGP_WSBEiJ_G0031103.1 mouse_genomes_project 7 27395825 27422453 + MGP_WSBEiJ_P0081326 Fbxo17 protein_coding protein_coding MGP_WSBEiJ_T0081327.1 MGP_WSBEiJ_G0031103.1 mouse_genomes_project 7 27395849 27407544 + Fbxo17 protein_coding retained_intron MGP_WSBEiJ_T0081328.1 MGP_WSBEiJ_G0031103.1 mouse_genomes_project 7 27395866 27422459 + MGP_WSBEiJ_P0081328 Fbxo17 protein_coding protein_coding MGP_WSBEiJ_T0081329.1 MGP_WSBEiJ_G0031103.1 mouse_genomes_project 7 27415715 27421797 + MGP_WSBEiJ_P0081329 Fbxo17 protein_coding protein_coding MGP_WSBEiJ_T0081445.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28060918 28076737 + MGP_WSBEiJ_P0081445 Dpf1 protein_coding protein_coding MGP_WSBEiJ_T0081446.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28060943 28077063 + MGP_WSBEiJ_P0081446 Dpf1 protein_coding protein_coding MGP_WSBEiJ_T0081447.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28067321 28076369 + MGP_WSBEiJ_P0081447 Dpf1 protein_coding protein_coding MGP_WSBEiJ_T0081448.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28067409 28076361 + Dpf1 protein_coding retained_intron MGP_WSBEiJ_T0081449.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28067409 28076376 + MGP_WSBEiJ_P0081449 Dpf1 protein_coding protein_coding MGP_WSBEiJ_T0081450.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28067415 28077059 + Dpf1 protein_coding processed_transcript MGP_WSBEiJ_T0081451.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28068910 28072693 + MGP_WSBEiJ_P0081451 Dpf1 protein_coding protein_coding MGP_WSBEiJ_T0081452.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28069003 28071097 + Dpf1 protein_coding processed_transcript MGP_WSBEiJ_T0081453.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28072414 28075209 + MGP_WSBEiJ_P0081453 Dpf1 protein_coding protein_coding MGP_WSBEiJ_T0081454.1 MGP_WSBEiJ_G0031130.1 mouse_genomes_project 7 28073614 28076035 + Dpf1 protein_coding retained_intron MGP_WSBEiJ_T0083562.1 MGP_WSBEiJ_G0031636.1 mouse_genomes_project 7 90478293 90512911 + MGP_WSBEiJ_P0083562 Ctsc protein_coding protein_coding MGP_WSBEiJ_T0083563.1 MGP_WSBEiJ_G0031636.1 mouse_genomes_project 7 90478342 90510046 + MGP_WSBEiJ_P0083563 Ctsc protein_coding protein_coding MGP_WSBEiJ_T0083564.1 MGP_WSBEiJ_G0031636.1 mouse_genomes_project 7 90478346 90482888 + Ctsc protein_coding retained_intron MGP_WSBEiJ_T0083565.1 MGP_WSBEiJ_G0031636.1 mouse_genomes_project 7 90478346 90492504 + Ctsc protein_coding retained_intron MGP_WSBEiJ_T0083566.1 MGP_WSBEiJ_G0031636.1 mouse_genomes_project 7 90498268 90504324 + Ctsc protein_coding retained_intron MGP_WSBEiJ_T0101084.1 MGP_WSBEiJ_G0039541.1 mouse_genomes_project 7 87840178 87840917 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0101119.1 MGP_WSBEiJ_G0039576.1 mouse_genomes_project 7 109056421 109308727 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081965.1 MGP_WSBEiJ_G0031238.1 mouse_genomes_project 7 34829442 34848234 + MGP_WSBEiJ_P0081965 Slc7a9 protein_coding protein_coding MGP_WSBEiJ_T0081966.1 MGP_WSBEiJ_G0031238.1 mouse_genomes_project 7 34829687 34848234 + MGP_WSBEiJ_P0081966 Slc7a9 protein_coding protein_coding MGP_WSBEiJ_T0081967.1 MGP_WSBEiJ_G0031238.1 mouse_genomes_project 7 34829748 34830721 + Slc7a9 protein_coding retained_intron MGP_WSBEiJ_T0081968.1 MGP_WSBEiJ_G0031238.1 mouse_genomes_project 7 34829750 34848201 + Slc7a9 protein_coding retained_intron MGP_WSBEiJ_T0081969.1 MGP_WSBEiJ_G0031238.1 mouse_genomes_project 7 34829820 34848234 + MGP_WSBEiJ_P0081969 Slc7a9 protein_coding protein_coding MGP_WSBEiJ_T0081970.1 MGP_WSBEiJ_G0031238.1 mouse_genomes_project 7 34830486 34837790 + MGP_WSBEiJ_P0081970 Slc7a9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080462.1 MGP_WSBEiJ_G0030856.1 mouse_genomes_project 7 13923912 13934812 + MGP_WSBEiJ_P0080462 Bbc3 protein_coding protein_coding MGP_WSBEiJ_T0080463.1 MGP_WSBEiJ_G0030856.1 mouse_genomes_project 7 13927078 13930353 + MGP_WSBEiJ_P0080463 Bbc3 protein_coding protein_coding MGP_WSBEiJ_T0080464.1 MGP_WSBEiJ_G0030856.1 mouse_genomes_project 7 13930131 13934307 + Bbc3 protein_coding processed_transcript MGP_WSBEiJ_T0084196.1 MGP_WSBEiJ_G0031848.1 mouse_genomes_project 7 107101354 107115353 + Trim6 protein_coding retained_intron MGP_WSBEiJ_T0084197.1 MGP_WSBEiJ_G0031848.1 mouse_genomes_project 7 107101356 107121549 + MGP_WSBEiJ_P0084197 Trim6 protein_coding protein_coding MGP_WSBEiJ_T0084198.1 MGP_WSBEiJ_G0031848.1 mouse_genomes_project 7 107101398 107113899 + MGP_WSBEiJ_P0084198 Trim6 protein_coding protein_coding MGP_WSBEiJ_T0084199.1 MGP_WSBEiJ_G0031848.1 mouse_genomes_project 7 107101983 107113936 + MGP_WSBEiJ_P0084199 Trim6 protein_coding protein_coding MGP_WSBEiJ_T0084200.1 MGP_WSBEiJ_G0031848.1 mouse_genomes_project 7 107103514 107114644 + MGP_WSBEiJ_P0084200 Trim6 protein_coding protein_coding MGP_WSBEiJ_T0084201.1 MGP_WSBEiJ_G0031848.1 mouse_genomes_project 7 107113508 107119498 + MGP_WSBEiJ_P0084201 Trim6 protein_coding protein_coding MGP_WSBEiJ_T0010698.1 MGP_WSBEiJ_G0008855.1 mouse_genomes_project 7 62463403 62463483 - Mir344d-2 miRNA miRNA MGP_WSBEiJ_T0083243.1 MGP_WSBEiJ_G0031549.1 mouse_genomes_project 7 81382043 81428273 - MGP_WSBEiJ_P0083243 Ap3s2 protein_coding protein_coding MGP_WSBEiJ_T0083244.1 MGP_WSBEiJ_G0031549.1 mouse_genomes_project 7 81389225 81428220 - MGP_WSBEiJ_P0083244 Ap3s2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0015346.1 MGP_WSBEiJ_G0013476.1 mouse_genomes_project 7 82803837 82804185 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085781.1 MGP_WSBEiJ_G0032243.1 mouse_genomes_project 7 135727009 135763378 + MGP_WSBEiJ_P0085781 Acadsb protein_coding protein_coding MGP_WSBEiJ_T0085782.1 MGP_WSBEiJ_G0032243.1 mouse_genomes_project 7 135727111 135761930 + MGP_WSBEiJ_P0085782 Acadsb protein_coding protein_coding MGP_WSBEiJ_T0085783.1 MGP_WSBEiJ_G0032243.1 mouse_genomes_project 7 135741709 135747263 + Acadsb protein_coding retained_intron MGP_WSBEiJ_T0085784.1 MGP_WSBEiJ_G0032243.1 mouse_genomes_project 7 135741744 135746063 + Acadsb protein_coding retained_intron MGP_WSBEiJ_T0085785.1 MGP_WSBEiJ_G0032243.1 mouse_genomes_project 7 135745856 135749415 + Acadsb protein_coding retained_intron MGP_WSBEiJ_T0085786.1 MGP_WSBEiJ_G0032243.1 mouse_genomes_project 7 135747083 135763376 + Acadsb protein_coding retained_intron MGP_WSBEiJ_T0085787.1 MGP_WSBEiJ_G0032243.1 mouse_genomes_project 7 135751518 135754606 + Acadsb protein_coding retained_intron MGP_WSBEiJ_T0085368.1 MGP_WSBEiJ_G0032163.1 mouse_genomes_project 7 131264943 131278247 - MGP_WSBEiJ_P0085368 Tbc1d10b protein_coding protein_coding MGP_WSBEiJ_T0085369.1 MGP_WSBEiJ_G0032163.1 mouse_genomes_project 7 131266202 131273675 - MGP_WSBEiJ_P0085369 Tbc1d10b protein_coding protein_coding MGP_WSBEiJ_T0085370.1 MGP_WSBEiJ_G0032163.1 mouse_genomes_project 7 131266537 131267466 - Tbc1d10b protein_coding retained_intron MGP_WSBEiJ_T0085371.1 MGP_WSBEiJ_G0032163.1 mouse_genomes_project 7 131266842 131277526 - Tbc1d10b protein_coding processed_transcript MGP_WSBEiJ_T0085372.1 MGP_WSBEiJ_G0032163.1 mouse_genomes_project 7 131267302 131268435 - Tbc1d10b protein_coding retained_intron MGP_WSBEiJ_T0085373.1 MGP_WSBEiJ_G0032163.1 mouse_genomes_project 7 131267347 131273575 - Tbc1d10b protein_coding retained_intron MGP_WSBEiJ_T0085374.1 MGP_WSBEiJ_G0032163.1 mouse_genomes_project 7 131267733 131273616 - Tbc1d10b protein_coding retained_intron MGP_WSBEiJ_T0085375.1 MGP_WSBEiJ_G0032163.1 mouse_genomes_project 7 131272874 131273396 - Tbc1d10b protein_coding retained_intron MGP_WSBEiJ_T0085004.1 MGP_WSBEiJ_G0032101.1 mouse_genomes_project 7 127276021 127335831 + MGP_WSBEiJ_P0085004 Lcmt1 protein_coding protein_coding MGP_WSBEiJ_T0085005.1 MGP_WSBEiJ_G0032101.1 mouse_genomes_project 7 127276095 127335823 + MGP_WSBEiJ_P0085005 Lcmt1 protein_coding protein_coding MGP_WSBEiJ_T0085006.1 MGP_WSBEiJ_G0032101.1 mouse_genomes_project 7 127314010 127328190 + Lcmt1 protein_coding processed_transcript MGP_WSBEiJ_T0085007.1 MGP_WSBEiJ_G0032101.1 mouse_genomes_project 7 127323590 127335817 + Lcmt1 protein_coding retained_intron MGP_WSBEiJ_T0085008.1 MGP_WSBEiJ_G0032101.1 mouse_genomes_project 7 127333336 127335821 + Lcmt1 protein_coding retained_intron MGP_WSBEiJ_T0080993.1 MGP_WSBEiJ_G0031010.1 mouse_genomes_project 7 23578612 23582720 + Tmem145 protein_coding retained_intron MGP_WSBEiJ_T0080994.1 MGP_WSBEiJ_G0031010.1 mouse_genomes_project 7 23578614 23589754 + MGP_WSBEiJ_P0080994 Tmem145 protein_coding protein_coding MGP_WSBEiJ_T0080995.1 MGP_WSBEiJ_G0031010.1 mouse_genomes_project 7 23578614 23589741 + MGP_WSBEiJ_P0080995 Tmem145 protein_coding protein_coding MGP_WSBEiJ_T0080996.1 MGP_WSBEiJ_G0031010.1 mouse_genomes_project 7 23588598 23589751 + Tmem145 protein_coding retained_intron MGP_WSBEiJ_T0015273.1 MGP_WSBEiJ_G0013403.1 mouse_genomes_project 7 33791322 33791967 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015267.1 MGP_WSBEiJ_G0013397.1 mouse_genomes_project 7 33068075 33068834 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015204.1 MGP_WSBEiJ_G0013334.1 mouse_genomes_project 7 911263 911543 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084410.1 MGP_WSBEiJ_G0031943.1 mouse_genomes_project 7 111074700 111075783 + MGP_WSBEiJ_P0084410 Olfr472 protein_coding protein_coding MGP_WSBEiJ_T0015322.1 MGP_WSBEiJ_G0013452.1 mouse_genomes_project 7 59850874 59851742 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082147.1 MGP_WSBEiJ_G0031283.1 mouse_genomes_project 7 43782560 43793577 + MGP_WSBEiJ_P0082147 Zfp819 protein_coding protein_coding MGP_WSBEiJ_T0082148.1 MGP_WSBEiJ_G0031283.1 mouse_genomes_project 7 43782600 43788038 + MGP_WSBEiJ_P0082148 Zfp819 protein_coding protein_coding MGP_WSBEiJ_T0082149.1 MGP_WSBEiJ_G0031283.1 mouse_genomes_project 7 43782616 43793646 + MGP_WSBEiJ_P0082149 Zfp819 protein_coding protein_coding MGP_WSBEiJ_T0082150.1 MGP_WSBEiJ_G0031283.1 mouse_genomes_project 7 43785321 43793279 + MGP_WSBEiJ_P0082150 Zfp819 protein_coding protein_coding MGP_WSBEiJ_T0099758.1 MGP_WSBEiJ_G0038421.1 mouse_genomes_project 7 147047580 147047674 + Gm25370 snoRNA snoRNA MGP_WSBEiJ_T0083896.1 MGP_WSBEiJ_G0031718.1 mouse_genomes_project 7 103261055 103298522 + MGP_WSBEiJ_P0083896 Rab6a protein_coding protein_coding MGP_WSBEiJ_T0083897.1 MGP_WSBEiJ_G0031718.1 mouse_genomes_project 7 103261231 103298522 + MGP_WSBEiJ_P0083897 Rab6a protein_coding protein_coding MGP_WSBEiJ_T0083898.1 MGP_WSBEiJ_G0031718.1 mouse_genomes_project 7 103261335 103298522 + MGP_WSBEiJ_P0083898 Rab6a protein_coding protein_coding MGP_WSBEiJ_T0083899.1 MGP_WSBEiJ_G0031718.1 mouse_genomes_project 7 103291600 103296616 + Rab6a protein_coding retained_intron MGP_WSBEiJ_T0086152.1 MGP_WSBEiJ_G0032355.1 mouse_genomes_project 7 146051979 146054778 + MGP_WSBEiJ_P0086152 Rassf7 protein_coding protein_coding MGP_WSBEiJ_T0086153.1 MGP_WSBEiJ_G0032355.1 mouse_genomes_project 7 146051994 146054120 + Rassf7 protein_coding processed_transcript MGP_WSBEiJ_T0086154.1 MGP_WSBEiJ_G0032355.1 mouse_genomes_project 7 146052018 146053633 + Rassf7 protein_coding processed_transcript MGP_WSBEiJ_T0086155.1 MGP_WSBEiJ_G0032355.1 mouse_genomes_project 7 146052097 146053598 + MGP_WSBEiJ_P0086155 Rassf7 protein_coding protein_coding MGP_WSBEiJ_T0086156.1 MGP_WSBEiJ_G0032355.1 mouse_genomes_project 7 146052322 146053592 + MGP_WSBEiJ_P0086156 Rassf7 protein_coding protein_coding MGP_WSBEiJ_T0086157.1 MGP_WSBEiJ_G0032355.1 mouse_genomes_project 7 146052754 146053725 + MGP_WSBEiJ_P0086157 Rassf7 protein_coding protein_coding MGP_WSBEiJ_T0086158.1 MGP_WSBEiJ_G0032355.1 mouse_genomes_project 7 146052819 146053833 + MGP_WSBEiJ_P0086158 Rassf7 protein_coding protein_coding MGP_WSBEiJ_T0080740.1 MGP_WSBEiJ_G0030939.1 mouse_genomes_project 7 17662546 17678702 - MGP_WSBEiJ_P0080740 Tomm40 protein_coding protein_coding MGP_WSBEiJ_T0080741.1 MGP_WSBEiJ_G0030939.1 mouse_genomes_project 7 17662562 17678689 - MGP_WSBEiJ_P0080741 Tomm40 protein_coding protein_coding MGP_WSBEiJ_T0080742.1 MGP_WSBEiJ_G0030939.1 mouse_genomes_project 7 17663053 17672729 - Tomm40 protein_coding retained_intron MGP_WSBEiJ_T0080743.1 MGP_WSBEiJ_G0030939.1 mouse_genomes_project 7 17663897 17664373 - MGP_WSBEiJ_P0080743 Tomm40 protein_coding protein_coding MGP_WSBEiJ_T0080744.1 MGP_WSBEiJ_G0030939.1 mouse_genomes_project 7 17674675 17678692 - Tomm40 protein_coding retained_intron MGP_WSBEiJ_T0082081.1 MGP_WSBEiJ_G0031264.1 mouse_genomes_project 7 41975429 42162092 + MGP_WSBEiJ_P0082081 Vmn2r61 protein_coding protein_coding MGP_WSBEiJ_T0082082.1 MGP_WSBEiJ_G0031264.1 mouse_genomes_project 7 42152632 42162302 + Vmn2r61 protein_coding processed_transcript MGP_WSBEiJ_T0079887.1 MGP_WSBEiJ_G0030682.1 mouse_genomes_project 7 180964 198566 + Prkcg protein_coding processed_transcript MGP_WSBEiJ_T0079892.1 MGP_WSBEiJ_G0030682.1 mouse_genomes_project 7 197776 226813 + MGP_WSBEiJ_P0079892 Prkcg protein_coding protein_coding MGP_WSBEiJ_T0079893.1 MGP_WSBEiJ_G0030682.1 mouse_genomes_project 7 197899 226081 + MGP_WSBEiJ_P0079893 Prkcg protein_coding protein_coding MGP_WSBEiJ_T0079894.1 MGP_WSBEiJ_G0030682.1 mouse_genomes_project 7 199748 214765 + MGP_WSBEiJ_P0079894 Prkcg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079895.1 MGP_WSBEiJ_G0030682.1 mouse_genomes_project 7 224551 225734 + Prkcg protein_coding retained_intron MGP_WSBEiJ_T0080628.1 MGP_WSBEiJ_G0030909.1 mouse_genomes_project 7 17071451 17082372 - MGP_WSBEiJ_P0080628 Gipr protein_coding protein_coding MGP_WSBEiJ_T0080629.1 MGP_WSBEiJ_G0030909.1 mouse_genomes_project 7 17071454 17082372 - Gipr protein_coding retained_intron MGP_WSBEiJ_T0080630.1 MGP_WSBEiJ_G0030909.1 mouse_genomes_project 7 17078534 17082372 - MGP_WSBEiJ_P0080630 Gipr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080631.1 MGP_WSBEiJ_G0030909.1 mouse_genomes_project 7 17078701 17081339 - Gipr protein_coding retained_intron MGP_WSBEiJ_T0080596.1 MGP_WSBEiJ_G0030902.1 mouse_genomes_project 7 16981746 16990136 + MGP_WSBEiJ_P0080596 Dmwd protein_coding protein_coding MGP_WSBEiJ_T0080597.1 MGP_WSBEiJ_G0030902.1 mouse_genomes_project 7 16981777 16990136 + MGP_WSBEiJ_P0080597 Dmwd protein_coding protein_coding MGP_WSBEiJ_T0080598.1 MGP_WSBEiJ_G0030902.1 mouse_genomes_project 7 16983547 16990135 + Dmwd protein_coding processed_transcript MGP_WSBEiJ_T0080599.1 MGP_WSBEiJ_G0030902.1 mouse_genomes_project 7 16983580 16989862 + Dmwd protein_coding processed_transcript MGP_WSBEiJ_T0083888.1 MGP_WSBEiJ_G0031717.1 mouse_genomes_project 7 103197433 103237293 - MGP_WSBEiJ_P0083888 protein_coding protein_coding MGP_WSBEiJ_T0083889.1 MGP_WSBEiJ_G0031717.1 mouse_genomes_project 7 103197438 103199301 - MGP_WSBEiJ_P0083889 protein_coding protein_coding MGP_WSBEiJ_T0083890.1 MGP_WSBEiJ_G0031717.1 mouse_genomes_project 7 103201495 103228906 - protein_coding processed_transcript MGP_WSBEiJ_T0083891.1 MGP_WSBEiJ_G0031717.1 mouse_genomes_project 7 103202836 103246923 - protein_coding processed_transcript MGP_WSBEiJ_T0083892.1 MGP_WSBEiJ_G0031717.1 mouse_genomes_project 7 103204815 103261943 - protein_coding processed_transcript MGP_WSBEiJ_T0083893.1 MGP_WSBEiJ_G0031717.1 mouse_genomes_project 7 103219573 103237266 - MGP_WSBEiJ_P0083893 protein_coding protein_coding MGP_WSBEiJ_T0083894.1 MGP_WSBEiJ_G0031717.1 mouse_genomes_project 7 103219584 103237301 - protein_coding processed_transcript MGP_WSBEiJ_T0083895.1 MGP_WSBEiJ_G0031717.1 mouse_genomes_project 7 103219588 103261640 - protein_coding processed_transcript MGP_WSBEiJ_T0082768.1 MGP_WSBEiJ_G0031457.1 mouse_genomes_project 7 52691027 52692718 - MGP_WSBEiJ_P0082768 Fancf protein_coding protein_coding MGP_WSBEiJ_T0015279.1 MGP_WSBEiJ_G0013409.1 mouse_genomes_project 7 39282817 39283281 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010749.1 MGP_WSBEiJ_G0008906.1 mouse_genomes_project 7 144647469 144647541 - Mir202 miRNA miRNA MGP_WSBEiJ_T0083929.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 103999225 104013680 - MGP_WSBEiJ_P0083929 Atg16l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083930.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 103999448 104013741 - MGP_WSBEiJ_P0083930 Atg16l2 protein_coding protein_coding MGP_WSBEiJ_T0083931.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 103999450 104000293 - Atg16l2 protein_coding retained_intron MGP_WSBEiJ_T0083932.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 103999450 104013724 - MGP_WSBEiJ_P0083932 Atg16l2 protein_coding protein_coding MGP_WSBEiJ_T0083933.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 103999459 104013904 - MGP_WSBEiJ_P0083933 Atg16l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083934.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 103999661 104000410 - Atg16l2 protein_coding retained_intron MGP_WSBEiJ_T0083935.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 104000477 104001977 - Atg16l2 protein_coding retained_intron MGP_WSBEiJ_T0083936.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 104000994 104001980 - Atg16l2 protein_coding retained_intron MGP_WSBEiJ_T0083937.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 104001408 104002222 - Atg16l2 protein_coding retained_intron MGP_WSBEiJ_T0083938.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 104001837 104008437 - Atg16l2 protein_coding retained_intron MGP_WSBEiJ_T0083939.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 104002236 104008450 - MGP_WSBEiJ_P0083939 Atg16l2 protein_coding protein_coding MGP_WSBEiJ_T0083940.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 104004703 104008380 - Atg16l2 protein_coding retained_intron MGP_WSBEiJ_T0083941.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 104007895 104008837 - Atg16l2 protein_coding retained_intron MGP_WSBEiJ_T0083942.1 MGP_WSBEiJ_G0031726.1 mouse_genomes_project 7 104008562 104013724 - MGP_WSBEiJ_P0083942 Atg16l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083504.1 MGP_WSBEiJ_G0031602.1 mouse_genomes_project 7 85674801 85692106 + Mesdc2 protein_coding processed_transcript MGP_WSBEiJ_T0083505.1 MGP_WSBEiJ_G0031602.1 mouse_genomes_project 7 85684572 85695684 + MGP_WSBEiJ_P0083505 Mesdc2 protein_coding protein_coding MGP_WSBEiJ_T0083506.1 MGP_WSBEiJ_G0031602.1 mouse_genomes_project 7 85684574 85691933 + MGP_WSBEiJ_P0083506 Mesdc2 protein_coding protein_coding MGP_WSBEiJ_T0083507.1 MGP_WSBEiJ_G0031602.1 mouse_genomes_project 7 85684902 85692246 + MGP_WSBEiJ_P0083507 Mesdc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083874.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103140994 103149678 + MGP_WSBEiJ_P0083874 Ucp2 protein_coding protein_coding MGP_WSBEiJ_T0083875.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103141021 103144605 + Ucp2 protein_coding retained_intron MGP_WSBEiJ_T0083876.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103141452 103144820 + MGP_WSBEiJ_P0083876 Ucp2 protein_coding protein_coding MGP_WSBEiJ_T0083877.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103141724 103144962 + MGP_WSBEiJ_P0083877 Ucp2 protein_coding protein_coding MGP_WSBEiJ_T0083878.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103143735 103145913 + MGP_WSBEiJ_P0083878 Ucp2 protein_coding protein_coding MGP_WSBEiJ_T0083879.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103144852 103146282 + Ucp2 protein_coding processed_transcript MGP_WSBEiJ_T0083880.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103144924 103146397 + Ucp2 protein_coding processed_transcript MGP_WSBEiJ_T0083881.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103145797 103146268 + Ucp2 protein_coding processed_transcript MGP_WSBEiJ_T0083882.1 MGP_WSBEiJ_G0031714.1 mouse_genomes_project 7 103146002 103146959 + Ucp2 protein_coding processed_transcript MGP_WSBEiJ_T0008892.1 MGP_WSBEiJ_G0007163.1 mouse_genomes_project 7 132994332 133130402 + Gm44671 lincRNA lincRNA MGP_WSBEiJ_T0017730.1 MGP_WSBEiJ_G0015075.1 mouse_genomes_project 7 3822782 3833385 - Gm44015 processed_transcript lincRNA MGP_WSBEiJ_T0017731.1 MGP_WSBEiJ_G0015075.1 mouse_genomes_project 7 3822820 3829387 - Gm44015 processed_transcript retained_intron MGP_WSBEiJ_T0082695.1 MGP_WSBEiJ_G0031430.1 mouse_genomes_project 7 47455116 47459340 + protein_coding processed_transcript MGP_WSBEiJ_T0082696.1 MGP_WSBEiJ_G0031430.1 mouse_genomes_project 7 47455197 47459348 + protein_coding processed_transcript MGP_WSBEiJ_T0082697.1 MGP_WSBEiJ_G0031430.1 mouse_genomes_project 7 47458360 47459341 + MGP_WSBEiJ_P0082697 protein_coding protein_coding MGP_WSBEiJ_T0084427.1 MGP_WSBEiJ_G0031960.1 mouse_genomes_project 7 111743895 111744856 - MGP_WSBEiJ_P0084427 Olfr657 protein_coding protein_coding MGP_WSBEiJ_T0084115.1 MGP_WSBEiJ_G0031771.1 mouse_genomes_project 7 105567716 105568787 + MGP_WSBEiJ_P0084115 Olfr561 protein_coding protein_coding MGP_WSBEiJ_T0082159.1 MGP_WSBEiJ_G0031289.1 mouse_genomes_project 7 43956513 43961202 + MGP_WSBEiJ_P0082159 Klk12 protein_coding protein_coding MGP_WSBEiJ_T0082160.1 MGP_WSBEiJ_G0031289.1 mouse_genomes_project 7 43956716 43961092 + MGP_WSBEiJ_P0082160 Klk12 protein_coding protein_coding MGP_WSBEiJ_T0008836.1 MGP_WSBEiJ_G0007130.1 mouse_genomes_project 7 112179354 112190117 - Gm26599 lincRNA lincRNA MGP_WSBEiJ_T0080861.1 MGP_WSBEiJ_G0030980.1 mouse_genomes_project 7 22654932 22663310 + MGP_WSBEiJ_P0080861 Zfp428 protein_coding protein_coding MGP_WSBEiJ_T0080862.1 MGP_WSBEiJ_G0030980.1 mouse_genomes_project 7 22654996 22663573 + MGP_WSBEiJ_P0080862 Zfp428 protein_coding protein_coding MGP_WSBEiJ_T0080863.1 MGP_WSBEiJ_G0030980.1 mouse_genomes_project 7 22655025 22662994 + MGP_WSBEiJ_P0080863 Zfp428 protein_coding protein_coding MGP_WSBEiJ_T0080864.1 MGP_WSBEiJ_G0030980.1 mouse_genomes_project 7 22655056 22663571 + MGP_WSBEiJ_P0080864 Zfp428 protein_coding protein_coding MGP_WSBEiJ_T0084404.1 MGP_WSBEiJ_G0031939.1 mouse_genomes_project 7 110709195 110865739 + MGP_WSBEiJ_P0084404 Ppfibp2 protein_coding protein_coding MGP_WSBEiJ_T0084405.1 MGP_WSBEiJ_G0031939.1 mouse_genomes_project 7 110721970 110869460 + MGP_WSBEiJ_P0084405 Ppfibp2 protein_coding protein_coding MGP_WSBEiJ_T0080332.1 MGP_WSBEiJ_G0030816.1 mouse_genomes_project 7 10326408 10329182 - MGP_WSBEiJ_P0080332 Chmp2a protein_coding protein_coding MGP_WSBEiJ_T0080584.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16924558 16956688 + MGP_WSBEiJ_P0080584 Sympk protein_coding unknown_likely_coding MGP_WSBEiJ_T0080585.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16924560 16959526 + MGP_WSBEiJ_P0080585 Sympk protein_coding protein_coding MGP_WSBEiJ_T0080586.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16924603 16939951 + MGP_WSBEiJ_P0080586 Sympk protein_coding protein_coding MGP_WSBEiJ_T0080587.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16924606 16939063 + Sympk protein_coding retained_intron MGP_WSBEiJ_T0080588.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16924609 16956685 + MGP_WSBEiJ_P0080588 Sympk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080589.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16950669 16954993 + Sympk protein_coding processed_transcript MGP_WSBEiJ_T0080590.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16957269 16959521 + Sympk protein_coding processed_transcript MGP_WSBEiJ_T0080591.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16957336 16959527 + MGP_WSBEiJ_P0080591 Sympk protein_coding protein_coding MGP_WSBEiJ_T0080592.1 MGP_WSBEiJ_G0030900.1 mouse_genomes_project 7 16957366 16958817 + Sympk protein_coding retained_intron MGP_WSBEiJ_T0005208.1 MGP_WSBEiJ_G0004416.1 mouse_genomes_project 7 127885712 127900111 - Gm27040 antisense antisense MGP_WSBEiJ_T0083513.1 MGP_WSBEiJ_G0031604.1 mouse_genomes_project 7 85904918 85948447 - MGP_WSBEiJ_P0083513 Abhd17c protein_coding protein_coding MGP_WSBEiJ_T0083514.1 MGP_WSBEiJ_G0031604.1 mouse_genomes_project 7 85909801 85944370 - Abhd17c protein_coding processed_transcript MGP_WSBEiJ_T0015331.1 MGP_WSBEiJ_G0013461.1 mouse_genomes_project 7 71621069 71622073 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101068.1 MGP_WSBEiJ_G0039525.1 mouse_genomes_project 7 86610636 86612762 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079937.1 MGP_WSBEiJ_G0030692.1 mouse_genomes_project 7 534656 540833 - MGP_WSBEiJ_P0079937 Leng1 protein_coding protein_coding MGP_WSBEiJ_T0081953.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34770115 34817726 + MGP_WSBEiJ_P0081953 Cep89 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081954.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34770135 34817728 + MGP_WSBEiJ_P0081954 Cep89 protein_coding protein_coding MGP_WSBEiJ_T0081955.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34770187 34784048 + Cep89 protein_coding retained_intron MGP_WSBEiJ_T0081956.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34770196 34782702 + Cep89 protein_coding processed_transcript MGP_WSBEiJ_T0081957.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34770210 34782685 + MGP_WSBEiJ_P0081957 Cep89 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081958.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34770248 34817607 + MGP_WSBEiJ_P0081958 Cep89 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081959.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34789542 34791473 + Cep89 protein_coding processed_transcript MGP_WSBEiJ_T0081960.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34789635 34794418 + Cep89 protein_coding retained_intron MGP_WSBEiJ_T0081961.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34791004 34807680 + MGP_WSBEiJ_P0081961 Cep89 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081962.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34791493 34807181 + Cep89 protein_coding processed_transcript MGP_WSBEiJ_T0081963.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34806749 34811975 + Cep89 protein_coding retained_intron MGP_WSBEiJ_T0081964.1 MGP_WSBEiJ_G0031237.1 mouse_genomes_project 7 34807787 34817720 + MGP_WSBEiJ_P0081964 Cep89 protein_coding protein_coding MGP_WSBEiJ_T0081998.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35088328 35162426 - MGP_WSBEiJ_P0081998 Dpy19l3 protein_coding protein_coding MGP_WSBEiJ_T0081999.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35093890 35111335 - MGP_WSBEiJ_P0081999 Dpy19l3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082000.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35110466 35111808 - Dpy19l3 protein_coding retained_intron MGP_WSBEiJ_T0082001.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35110875 35111894 - Dpy19l3 protein_coding retained_intron MGP_WSBEiJ_T0082002.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35117402 35133724 - MGP_WSBEiJ_P0082002 Dpy19l3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082003.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35119210 35126745 - Dpy19l3 protein_coding retained_intron MGP_WSBEiJ_T0082004.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35122700 35128537 - Dpy19l3 protein_coding processed_transcript MGP_WSBEiJ_T0082005.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35128551 35133768 - Dpy19l3 protein_coding retained_intron MGP_WSBEiJ_T0082006.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35133669 35162371 - Dpy19l3 protein_coding processed_transcript MGP_WSBEiJ_T0082007.1 MGP_WSBEiJ_G0031244.1 mouse_genomes_project 7 35159271 35162327 - Dpy19l3 protein_coding retained_intron MGP_WSBEiJ_T0084406.1 MGP_WSBEiJ_G0031940.1 mouse_genomes_project 7 110742479 110743670 - MGP_WSBEiJ_P0084406 5330417H12Rik protein_coding protein_coding MGP_WSBEiJ_T0005216.1 MGP_WSBEiJ_G0004423.1 mouse_genomes_project 7 131723850 131724396 - 1700120K04Rik antisense antisense MGP_WSBEiJ_T0002224.1 MGP_WSBEiJ_G0002142.1 mouse_genomes_project 7 78819759 78820612 + TEC TEC MGP_WSBEiJ_T0085209.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823235 130826797 + MGP_WSBEiJ_P0085209 Ypel3 protein_coding protein_coding MGP_WSBEiJ_T0085210.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823255 130826794 + MGP_WSBEiJ_P0085210 Ypel3 protein_coding protein_coding MGP_WSBEiJ_T0085211.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823258 130824380 + MGP_WSBEiJ_P0085211 Ypel3 protein_coding protein_coding MGP_WSBEiJ_T0085212.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823279 130824705 + Ypel3 protein_coding processed_transcript MGP_WSBEiJ_T0085213.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823279 130826796 + Ypel3 protein_coding processed_transcript MGP_WSBEiJ_T0085214.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823281 130826797 + MGP_WSBEiJ_P0085214 Ypel3 protein_coding protein_coding MGP_WSBEiJ_T0085215.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823285 130826348 + MGP_WSBEiJ_P0085215 Ypel3 protein_coding protein_coding MGP_WSBEiJ_T0085216.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823427 130824153 + MGP_WSBEiJ_P0085216 Ypel3 protein_coding protein_coding MGP_WSBEiJ_T0085217.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823493 130826729 + MGP_WSBEiJ_P0085217 Ypel3 protein_coding protein_coding MGP_WSBEiJ_T0085218.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823786 130826514 + Ypel3 protein_coding processed_transcript MGP_WSBEiJ_T0085219.1 MGP_WSBEiJ_G0032136.1 mouse_genomes_project 7 130823859 130824572 + Ypel3 protein_coding retained_intron MGP_WSBEiJ_T0015413.1 MGP_WSBEiJ_G0013543.1 mouse_genomes_project 7 132276431 132276778 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015294.1 MGP_WSBEiJ_G0013424.1 mouse_genomes_project 7 42876626 42877021 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085986.1 MGP_WSBEiJ_G0032293.1 mouse_genomes_project 7 144631348 144632672 + MGP_WSBEiJ_P0085986 Utf1 protein_coding protein_coding MGP_WSBEiJ_T0083414.1 MGP_WSBEiJ_G0031577.1 mouse_genomes_project 7 83004816 83006616 - Rps17 protein_coding processed_transcript MGP_WSBEiJ_T0083415.1 MGP_WSBEiJ_G0031577.1 mouse_genomes_project 7 83004817 83007339 - MGP_WSBEiJ_P0083415 Rps17 protein_coding protein_coding MGP_WSBEiJ_T0083416.1 MGP_WSBEiJ_G0031577.1 mouse_genomes_project 7 83004824 83007319 - Rps17 protein_coding retained_intron MGP_WSBEiJ_T0083417.1 MGP_WSBEiJ_G0031577.1 mouse_genomes_project 7 83005501 83007317 - Rps17 protein_coding retained_intron MGP_WSBEiJ_T0083418.1 MGP_WSBEiJ_G0031577.1 mouse_genomes_project 7 83006788 83007309 - Rps17 protein_coding processed_transcript MGP_WSBEiJ_T0008702.1 MGP_WSBEiJ_G0007040.1 mouse_genomes_project 7 37573688 37585269 - Gm45106 lincRNA lincRNA MGP_WSBEiJ_T0084237.1 MGP_WSBEiJ_G0031863.1 mouse_genomes_project 7 107434034 107435025 + MGP_WSBEiJ_P0084237 Olfr656 protein_coding protein_coding MGP_WSBEiJ_T0008891.1 MGP_WSBEiJ_G0007162.1 mouse_genomes_project 7 132783016 132785407 - Gm45121 lincRNA lincRNA MGP_WSBEiJ_T0080253.1 MGP_WSBEiJ_G0030783.1 mouse_genomes_project 7 7801826 7803558 - MGP_WSBEiJ_P0080253 Vmn1r69 protein_coding protein_coding MGP_WSBEiJ_T0080255.1 MGP_WSBEiJ_G0030783.1 mouse_genomes_project 7 7802759 7840107 - MGP_WSBEiJ_P0080255 Vmn1r69 protein_coding protein_coding MGP_WSBEiJ_T0080256.1 MGP_WSBEiJ_G0030783.1 mouse_genomes_project 7 7802759 7840107 - MGP_WSBEiJ_P0080256 Vmn1r69 protein_coding protein_coding MGP_WSBEiJ_T0008665.1 MGP_WSBEiJ_G0007005.1 mouse_genomes_project 7 17231037 17233550 - Gm26802 lincRNA lincRNA MGP_WSBEiJ_T0100328.1 MGP_WSBEiJ_G0038820.1 mouse_genomes_project 7 44120415 44124908 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100329.1 MGP_WSBEiJ_G0038820.1 mouse_genomes_project 7 44122218 44126035 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0085808.1 MGP_WSBEiJ_G0032253.1 mouse_genomes_project 7 137089189 137159887 - MGP_WSBEiJ_P0085808 Fam53b protein_coding protein_coding MGP_WSBEiJ_T0085809.1 MGP_WSBEiJ_G0032253.1 mouse_genomes_project 7 137137719 137193736 - MGP_WSBEiJ_P0085809 Fam53b protein_coding protein_coding MGP_WSBEiJ_T0085810.1 MGP_WSBEiJ_G0032253.1 mouse_genomes_project 7 137137719 137167610 - MGP_WSBEiJ_P0085810 Fam53b protein_coding protein_coding MGP_WSBEiJ_T0085811.1 MGP_WSBEiJ_G0032253.1 mouse_genomes_project 7 137138554 137194370 - MGP_WSBEiJ_P0085811 Fam53b protein_coding protein_coding MGP_WSBEiJ_T0085812.1 MGP_WSBEiJ_G0032253.1 mouse_genomes_project 7 137159809 137188051 - MGP_WSBEiJ_P0085812 Fam53b protein_coding protein_coding MGP_WSBEiJ_T0085813.1 MGP_WSBEiJ_G0032253.1 mouse_genomes_project 7 137159920 137160981 - Fam53b protein_coding processed_transcript MGP_WSBEiJ_T0085814.1 MGP_WSBEiJ_G0032253.1 mouse_genomes_project 7 137159979 137183421 - Fam53b protein_coding processed_transcript MGP_WSBEiJ_T0100144.1 MGP_WSBEiJ_G0038729.1 mouse_genomes_project 7 27131904 27137053 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100145.1 MGP_WSBEiJ_G0038729.1 mouse_genomes_project 7 27136280 27136835 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0086083.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658413 145677511 + MGP_WSBEiJ_P0086083 Psmd13 protein_coding protein_coding MGP_WSBEiJ_T0086084.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658859 145676781 + Psmd13 protein_coding retained_intron MGP_WSBEiJ_T0086085.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658874 145663711 + Psmd13 protein_coding processed_transcript MGP_WSBEiJ_T0086086.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658883 145663309 + Psmd13 protein_coding processed_transcript MGP_WSBEiJ_T0086087.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658897 145666165 + Psmd13 protein_coding processed_transcript MGP_WSBEiJ_T0086088.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658912 145663624 + Psmd13 protein_coding retained_intron MGP_WSBEiJ_T0086089.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658917 145677157 + MGP_WSBEiJ_P0086089 Psmd13 protein_coding protein_coding MGP_WSBEiJ_T0086090.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658917 145677102 + MGP_WSBEiJ_P0086090 Psmd13 protein_coding protein_coding MGP_WSBEiJ_T0086091.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145658917 145677157 + MGP_WSBEiJ_P0086091 Psmd13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086092.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145659945 145662877 + Psmd13 protein_coding processed_transcript MGP_WSBEiJ_T0086093.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145665845 145677264 + MGP_WSBEiJ_P0086093 Psmd13 protein_coding protein_coding MGP_WSBEiJ_T0086094.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145666834 145676709 + Psmd13 protein_coding retained_intron MGP_WSBEiJ_T0086095.1 MGP_WSBEiJ_G0032336.1 mouse_genomes_project 7 145671709 145677512 + MGP_WSBEiJ_P0086095 Psmd13 protein_coding protein_coding MGP_WSBEiJ_T0080505.1 MGP_WSBEiJ_G0030868.1 mouse_genomes_project 7 14507850 14535748 + MGP_WSBEiJ_P0080505 Prkd2 protein_coding protein_coding MGP_WSBEiJ_T0080506.1 MGP_WSBEiJ_G0030868.1 mouse_genomes_project 7 14508013 14535843 + MGP_WSBEiJ_P0080506 Prkd2 protein_coding protein_coding MGP_WSBEiJ_T0080507.1 MGP_WSBEiJ_G0030868.1 mouse_genomes_project 7 14509109 14514488 + Prkd2 protein_coding processed_transcript MGP_WSBEiJ_T0080508.1 MGP_WSBEiJ_G0030868.1 mouse_genomes_project 7 14511040 14513416 + Prkd2 protein_coding processed_transcript MGP_WSBEiJ_T0080509.1 MGP_WSBEiJ_G0030868.1 mouse_genomes_project 7 14511607 14516223 + Prkd2 protein_coding retained_intron MGP_WSBEiJ_T0080510.1 MGP_WSBEiJ_G0030868.1 mouse_genomes_project 7 14514431 14519561 + Prkd2 protein_coding retained_intron MGP_WSBEiJ_T0080511.1 MGP_WSBEiJ_G0030868.1 mouse_genomes_project 7 14528820 14535266 + Prkd2 protein_coding retained_intron MGP_WSBEiJ_T0080512.1 MGP_WSBEiJ_G0030868.1 mouse_genomes_project 7 14534627 14535512 + Prkd2 protein_coding retained_intron MGP_WSBEiJ_T0083768.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101101741 101177849 - MGP_WSBEiJ_P0083768 Emsy protein_coding protein_coding MGP_WSBEiJ_T0083769.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101104456 101177616 - MGP_WSBEiJ_P0083769 Emsy protein_coding protein_coding MGP_WSBEiJ_T0083770.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101106120 101177621 - MGP_WSBEiJ_P0083770 Emsy protein_coding protein_coding MGP_WSBEiJ_T0083771.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101106788 101109748 - Emsy protein_coding retained_intron MGP_WSBEiJ_T0083772.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101109011 101110527 - Emsy protein_coding processed_transcript MGP_WSBEiJ_T0083773.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101110635 101130399 - MGP_WSBEiJ_P0083773 Emsy protein_coding protein_coding MGP_WSBEiJ_T0083774.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101112005 101119666 - Emsy protein_coding retained_intron MGP_WSBEiJ_T0083775.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101112559 101132899 - MGP_WSBEiJ_P0083775 Emsy protein_coding protein_coding MGP_WSBEiJ_T0083776.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101117719 101120126 - Emsy protein_coding retained_intron MGP_WSBEiJ_T0083777.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101119934 101177665 - MGP_WSBEiJ_P0083777 Emsy protein_coding protein_coding MGP_WSBEiJ_T0083778.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101147601 101177634 - MGP_WSBEiJ_P0083778 Emsy protein_coding protein_coding MGP_WSBEiJ_T0083779.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101154610 101162514 - MGP_WSBEiJ_P0083779 Emsy protein_coding protein_coding MGP_WSBEiJ_T0083780.1 MGP_WSBEiJ_G0031685.1 mouse_genomes_project 7 101160374 101177853 - Emsy protein_coding retained_intron MGP_WSBEiJ_T0008723.1 MGP_WSBEiJ_G0007052.1 mouse_genomes_project 7 44048654 44049982 - Gm44707 lincRNA lincRNA MGP_WSBEiJ_T0084420.1 MGP_WSBEiJ_G0031953.1 mouse_genomes_project 7 111439401 111454398 - MGP_WSBEiJ_P0084420 Olfr488 protein_coding protein_coding MGP_WSBEiJ_T0084786.1 MGP_WSBEiJ_G0032047.1 mouse_genomes_project 7 122843747 122883806 - MGP_WSBEiJ_P0084786 Gpr139 protein_coding protein_coding MGP_WSBEiJ_T0017792.1 MGP_WSBEiJ_G0015098.1 mouse_genomes_project 7 75211635 75221174 + Gm38143 processed_transcript processed_transcript MGP_WSBEiJ_T0082156.1 MGP_WSBEiJ_G0031288.1 mouse_genomes_project 7 43898366 43913314 + MGP_WSBEiJ_P0082156 Klk13 protein_coding protein_coding MGP_WSBEiJ_T0082157.1 MGP_WSBEiJ_G0031288.1 mouse_genomes_project 7 43899198 43907097 + MGP_WSBEiJ_P0082157 Klk13 protein_coding protein_coding MGP_WSBEiJ_T0082158.1 MGP_WSBEiJ_G0031288.1 mouse_genomes_project 7 43900758 43909653 + MGP_WSBEiJ_P0082158 Klk13 protein_coding protein_coding MGP_WSBEiJ_T0099727.1 MGP_WSBEiJ_G0038390.1 mouse_genomes_project 7 70003662 70003799 - Gm23795 snoRNA snoRNA MGP_WSBEiJ_T0082155.1 MGP_WSBEiJ_G0031287.1 mouse_genomes_project 7 43872034 43878385 + MGP_WSBEiJ_P0082155 Klk14 protein_coding protein_coding MGP_WSBEiJ_T0081316.1 MGP_WSBEiJ_G0031101.1 mouse_genomes_project 7 27265207 27290239 - MGP_WSBEiJ_P0081316 Acp7 protein_coding protein_coding MGP_WSBEiJ_T0081317.1 MGP_WSBEiJ_G0031101.1 mouse_genomes_project 7 27274131 27289679 - Acp7 protein_coding processed_transcript MGP_WSBEiJ_T0081318.1 MGP_WSBEiJ_G0031101.1 mouse_genomes_project 7 27274620 27289679 - Acp7 protein_coding processed_transcript MGP_WSBEiJ_T0081319.1 MGP_WSBEiJ_G0031101.1 mouse_genomes_project 7 27288662 27289672 - Acp7 protein_coding processed_transcript MGP_WSBEiJ_T0081320.1 MGP_WSBEiJ_G0031101.1 mouse_genomes_project 7 27288695 27290503 - Acp7 protein_coding processed_transcript MGP_WSBEiJ_T0008731.1 MGP_WSBEiJ_G0007059.1 mouse_genomes_project 7 64190829 64289201 - 4930554H23Rik lincRNA lincRNA MGP_WSBEiJ_T0002165.1 MGP_WSBEiJ_G0002084.1 mouse_genomes_project 7 36183227 36184386 + TEC TEC MGP_WSBEiJ_T0015324.1 MGP_WSBEiJ_G0013454.1 mouse_genomes_project 7 66075075 66076331 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015260.1 MGP_WSBEiJ_G0013390.1 mouse_genomes_project 7 24646719 24648779 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081085.1 MGP_WSBEiJ_G0031034.1 mouse_genomes_project 7 24965245 25007721 + MGP_WSBEiJ_P0081085 protein_coding protein_coding MGP_WSBEiJ_T0081086.1 MGP_WSBEiJ_G0031034.1 mouse_genomes_project 7 24965287 25007717 + MGP_WSBEiJ_P0081086 protein_coding protein_coding MGP_WSBEiJ_T0081087.1 MGP_WSBEiJ_G0031034.1 mouse_genomes_project 7 24965288 25000896 + MGP_WSBEiJ_P0081087 protein_coding protein_coding MGP_WSBEiJ_T0081088.1 MGP_WSBEiJ_G0031034.1 mouse_genomes_project 7 24965293 24997825 + protein_coding processed_transcript MGP_WSBEiJ_T0081089.1 MGP_WSBEiJ_G0031034.1 mouse_genomes_project 7 24980449 25007724 + MGP_WSBEiJ_P0081089 protein_coding protein_coding MGP_WSBEiJ_T0081090.1 MGP_WSBEiJ_G0031034.1 mouse_genomes_project 7 24980449 25009302 + MGP_WSBEiJ_P0081090 protein_coding protein_coding MGP_WSBEiJ_T0008818.1 MGP_WSBEiJ_G0007117.1 mouse_genomes_project 7 95098357 95102266 + Gm26981 lincRNA lincRNA MGP_WSBEiJ_T0080427.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13751365 13755087 + MGP_WSBEiJ_P0080427 Meis3 protein_coding protein_coding MGP_WSBEiJ_T0080428.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13751414 13755085 + MGP_WSBEiJ_P0080428 Meis3 protein_coding protein_coding MGP_WSBEiJ_T0080429.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13751550 13765730 + MGP_WSBEiJ_P0080429 Meis3 protein_coding protein_coding MGP_WSBEiJ_T0080430.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13751663 13765727 + Meis3 protein_coding retained_intron MGP_WSBEiJ_T0080431.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13751705 13765730 + MGP_WSBEiJ_P0080431 Meis3 protein_coding protein_coding MGP_WSBEiJ_T0080432.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13751705 13765730 + MGP_WSBEiJ_P0080432 Meis3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080433.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13753992 13754728 + Meis3 protein_coding retained_intron MGP_WSBEiJ_T0080434.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13755335 13764741 + MGP_WSBEiJ_P0080434 Meis3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080435.1 MGP_WSBEiJ_G0030850.1 mouse_genomes_project 7 13761156 13765730 + Meis3 protein_coding retained_intron MGP_WSBEiJ_T0085856.1 MGP_WSBEiJ_G0032260.1 mouse_genomes_project 7 138084993 138090765 - Mmp21 protein_coding retained_intron MGP_WSBEiJ_T0085857.1 MGP_WSBEiJ_G0032260.1 mouse_genomes_project 7 138084993 138090765 - MGP_WSBEiJ_P0085857 Mmp21 protein_coding protein_coding MGP_WSBEiJ_T0085858.1 MGP_WSBEiJ_G0032260.1 mouse_genomes_project 7 138085079 138090765 - MGP_WSBEiJ_P0085858 Mmp21 protein_coding protein_coding MGP_WSBEiJ_T0083527.1 MGP_WSBEiJ_G0031613.1 mouse_genomes_project 7 88306053 88328205 - MGP_WSBEiJ_P0083527 Vmn2r76 protein_coding protein_coding MGP_WSBEiJ_T0084586.1 MGP_WSBEiJ_G0032009.1 mouse_genomes_project 7 115820808 115986505 + MGP_WSBEiJ_P0084586 Parva protein_coding protein_coding MGP_WSBEiJ_T0084587.1 MGP_WSBEiJ_G0032009.1 mouse_genomes_project 7 115821011 115988570 + MGP_WSBEiJ_P0084587 Parva protein_coding protein_coding MGP_WSBEiJ_T0084588.1 MGP_WSBEiJ_G0032009.1 mouse_genomes_project 7 115821210 115949023 + MGP_WSBEiJ_P0084588 Parva protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084589.1 MGP_WSBEiJ_G0032009.1 mouse_genomes_project 7 115893500 115943712 + Parva protein_coding processed_transcript MGP_WSBEiJ_T0084590.1 MGP_WSBEiJ_G0032009.1 mouse_genomes_project 7 115911918 115985846 + MGP_WSBEiJ_P0084590 Parva protein_coding protein_coding MGP_WSBEiJ_T0084591.1 MGP_WSBEiJ_G0032009.1 mouse_genomes_project 7 115965325 115975728 + Parva protein_coding processed_transcript MGP_WSBEiJ_T0101106.1 MGP_WSBEiJ_G0039563.1 mouse_genomes_project 7 106467979 106591211 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084157.1 MGP_WSBEiJ_G0031811.1 mouse_genomes_project 7 106467846 106468800 - MGP_WSBEiJ_P0084157 Olfr622 protein_coding protein_coding MGP_WSBEiJ_T0008757.1 MGP_WSBEiJ_G0007077.1 mouse_genomes_project 7 72503605 72543877 + Gm29295 lincRNA lincRNA MGP_WSBEiJ_T0101017.1 MGP_WSBEiJ_G0039474.1 mouse_genomes_project 7 30333105 30334368 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080654.1 MGP_WSBEiJ_G0030916.1 mouse_genomes_project 7 17235500 17242835 - MGP_WSBEiJ_P0080654 Fosb protein_coding protein_coding MGP_WSBEiJ_T0008788.1 MGP_WSBEiJ_G0007103.1 mouse_genomes_project 7 80304180 80308351 - Gm44730 lincRNA lincRNA MGP_WSBEiJ_T0081776.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934580 29943732 - MGP_WSBEiJ_P0081776 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081777.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934584 29944367 - MGP_WSBEiJ_P0081777 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081778.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934588 29942315 - Fxyd5 protein_coding retained_intron MGP_WSBEiJ_T0081779.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934588 29939763 - Fxyd5 protein_coding retained_intron MGP_WSBEiJ_T0081780.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934588 29940937 - MGP_WSBEiJ_P0081780 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081781.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934588 29944011 - MGP_WSBEiJ_P0081781 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081782.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934591 29943971 - MGP_WSBEiJ_P0081782 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081783.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934591 29943971 - MGP_WSBEiJ_P0081783 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081784.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934621 29944039 - MGP_WSBEiJ_P0081784 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081785.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29934665 29944033 - MGP_WSBEiJ_P0081785 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081786.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29938301 29944009 - MGP_WSBEiJ_P0081786 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081787.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29938330 29944006 - MGP_WSBEiJ_P0081787 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081788.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29938332 29943980 - MGP_WSBEiJ_P0081788 Fxyd5 protein_coding protein_coding MGP_WSBEiJ_T0081789.1 MGP_WSBEiJ_G0031203.1 mouse_genomes_project 7 29943062 29944033 - Fxyd5 protein_coding retained_intron MGP_WSBEiJ_T0083982.1 MGP_WSBEiJ_G0031731.1 mouse_genomes_project 7 104559242 104563667 + MGP_WSBEiJ_P0083982 Phox2a protein_coding protein_coding MGP_WSBEiJ_T0080188.1 MGP_WSBEiJ_G0030751.1 mouse_genomes_project 7 2269654 2337082 - MGP_WSBEiJ_P0080188 Nlrp2 protein_coding protein_coding MGP_WSBEiJ_T0101101.1 MGP_WSBEiJ_G0039558.1 mouse_genomes_project 7 105944144 105945000 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084791.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123257792 123307411 + MGP_WSBEiJ_P0084791 Acsm2 protein_coding protein_coding MGP_WSBEiJ_T0084792.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123266163 123303367 + MGP_WSBEiJ_P0084792 Acsm2 protein_coding protein_coding MGP_WSBEiJ_T0084793.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123266378 123307411 + MGP_WSBEiJ_P0084793 Acsm2 protein_coding protein_coding MGP_WSBEiJ_T0084794.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123266382 123283441 + MGP_WSBEiJ_P0084794 Acsm2 protein_coding protein_coding MGP_WSBEiJ_T0084795.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123266456 123287165 + Acsm2 protein_coding processed_transcript MGP_WSBEiJ_T0084796.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123277609 123302775 + MGP_WSBEiJ_P0084796 Acsm2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084797.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123285906 123302936 + MGP_WSBEiJ_P0084797 Acsm2 protein_coding protein_coding MGP_WSBEiJ_T0084798.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123295618 123299312 + MGP_WSBEiJ_P0084798 Acsm2 protein_coding protein_coding MGP_WSBEiJ_T0084799.1 MGP_WSBEiJ_G0032052.1 mouse_genomes_project 7 123297628 123298218 + Acsm2 protein_coding retained_intron MGP_WSBEiJ_T0015280.1 MGP_WSBEiJ_G0013410.1 mouse_genomes_project 7 39354218 39354761 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011478.1 MGP_WSBEiJ_G0009635.1 mouse_genomes_project 7 10690672 10690940 + Gm23499 misc_RNA misc_RNA MGP_WSBEiJ_T0083753.1 MGP_WSBEiJ_G0031682.1 mouse_genomes_project 7 100853469 100864080 - MGP_WSBEiJ_P0083753 Tsku protein_coding protein_coding MGP_WSBEiJ_T0083754.1 MGP_WSBEiJ_G0031682.1 mouse_genomes_project 7 100853469 100864120 - MGP_WSBEiJ_P0083754 Tsku protein_coding protein_coding MGP_WSBEiJ_T0083755.1 MGP_WSBEiJ_G0031682.1 mouse_genomes_project 7 100853469 100864080 - MGP_WSBEiJ_P0083755 Tsku protein_coding protein_coding MGP_WSBEiJ_T0083756.1 MGP_WSBEiJ_G0031682.1 mouse_genomes_project 7 100853469 100864084 - MGP_WSBEiJ_P0083756 Tsku protein_coding protein_coding MGP_WSBEiJ_T0083757.1 MGP_WSBEiJ_G0031682.1 mouse_genomes_project 7 100853587 100862885 - MGP_WSBEiJ_P0083757 Tsku protein_coding protein_coding MGP_WSBEiJ_T0083758.1 MGP_WSBEiJ_G0031682.1 mouse_genomes_project 7 100853587 100862885 - MGP_WSBEiJ_P0083758 Tsku protein_coding protein_coding MGP_WSBEiJ_T0083759.1 MGP_WSBEiJ_G0031682.1 mouse_genomes_project 7 100853669 100864080 - MGP_WSBEiJ_P0083759 Tsku protein_coding protein_coding MGP_WSBEiJ_T0083760.1 MGP_WSBEiJ_G0031682.1 mouse_genomes_project 7 100856350 100862993 - Tsku protein_coding processed_transcript MGP_WSBEiJ_T0101089.1 MGP_WSBEiJ_G0039546.1 mouse_genomes_project 7 88258671 88259611 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083608.1 MGP_WSBEiJ_G0031650.1 mouse_genomes_project 7 92686996 92689345 + MGP_WSBEiJ_P0083608 Ccdc89 protein_coding protein_coding MGP_WSBEiJ_T0082864.1 MGP_WSBEiJ_G0031474.1 mouse_genomes_project 7 60607591 60642226 - MGP_WSBEiJ_P0082864 Snurf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082865.1 MGP_WSBEiJ_G0031474.1 mouse_genomes_project 7 60607591 60642226 - MGP_WSBEiJ_P0082865 Snurf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082866.1 MGP_WSBEiJ_G0031474.1 mouse_genomes_project 7 60610005 60614024 - Snurf protein_coding processed_transcript MGP_WSBEiJ_T0082867.1 MGP_WSBEiJ_G0031474.1 mouse_genomes_project 7 60613857 60614280 - Snurf protein_coding processed_transcript MGP_WSBEiJ_T0100143.1 MGP_WSBEiJ_G0038728.1 mouse_genomes_project 7 9306493 9311089 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0084177.1 MGP_WSBEiJ_G0031831.1 mouse_genomes_project 7 106814143 106815082 + MGP_WSBEiJ_P0084177 Olfr633 protein_coding protein_coding MGP_WSBEiJ_T0084575.1 MGP_WSBEiJ_G0032007.1 mouse_genomes_project 7 115608926 115741989 + MGP_WSBEiJ_P0084575 Mical2 protein_coding protein_coding MGP_WSBEiJ_T0084576.1 MGP_WSBEiJ_G0032007.1 mouse_genomes_project 7 115608960 115733830 + MGP_WSBEiJ_P0084576 Mical2 protein_coding protein_coding MGP_WSBEiJ_T0084577.1 MGP_WSBEiJ_G0032007.1 mouse_genomes_project 7 115608960 115700874 + MGP_WSBEiJ_P0084577 Mical2 protein_coding protein_coding MGP_WSBEiJ_T0084578.1 MGP_WSBEiJ_G0032007.1 mouse_genomes_project 7 115655101 115740768 + MGP_WSBEiJ_P0084578 Mical2 protein_coding protein_coding MGP_WSBEiJ_T0084579.1 MGP_WSBEiJ_G0032007.1 mouse_genomes_project 7 115701485 115732953 + Mical2 protein_coding retained_intron MGP_WSBEiJ_T0084580.1 MGP_WSBEiJ_G0032007.1 mouse_genomes_project 7 115732190 115741989 + MGP_WSBEiJ_P0084580 Mical2 protein_coding protein_coding MGP_WSBEiJ_T0085925.1 MGP_WSBEiJ_G0032281.1 mouse_genomes_project 7 143462710 143490392 + Ppp2r2d protein_coding retained_intron MGP_WSBEiJ_T0085926.1 MGP_WSBEiJ_G0032281.1 mouse_genomes_project 7 143463017 143488474 + MGP_WSBEiJ_P0085926 Ppp2r2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085927.1 MGP_WSBEiJ_G0032281.1 mouse_genomes_project 7 143463078 143504944 + MGP_WSBEiJ_P0085927 Ppp2r2d protein_coding protein_coding MGP_WSBEiJ_T0085928.1 MGP_WSBEiJ_G0032281.1 mouse_genomes_project 7 143463218 143488517 + Ppp2r2d protein_coding processed_transcript MGP_WSBEiJ_T0085929.1 MGP_WSBEiJ_G0032281.1 mouse_genomes_project 7 143463251 143495251 + MGP_WSBEiJ_P0085929 Ppp2r2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085930.1 MGP_WSBEiJ_G0032281.1 mouse_genomes_project 7 143463491 143488492 + Ppp2r2d protein_coding processed_transcript MGP_WSBEiJ_T0085931.1 MGP_WSBEiJ_G0032281.1 mouse_genomes_project 7 143487099 143495245 + MGP_WSBEiJ_P0085931 Ppp2r2d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080600.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16991210 17003345 + MGP_WSBEiJ_P0080600 Dmpk protein_coding protein_coding MGP_WSBEiJ_T0080601.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16991229 16996440 + MGP_WSBEiJ_P0080601 Dmpk protein_coding protein_coding MGP_WSBEiJ_T0080602.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16991231 17003345 + MGP_WSBEiJ_P0080602 Dmpk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080603.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16991246 17003345 + MGP_WSBEiJ_P0080603 Dmpk protein_coding protein_coding MGP_WSBEiJ_T0080604.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16991302 17003345 + MGP_WSBEiJ_P0080604 Dmpk protein_coding protein_coding MGP_WSBEiJ_T0080605.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16992071 16997180 + Dmpk protein_coding processed_transcript MGP_WSBEiJ_T0080606.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16993861 17003343 + Dmpk protein_coding retained_intron MGP_WSBEiJ_T0080607.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16993861 17003343 + Dmpk protein_coding retained_intron MGP_WSBEiJ_T0080608.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16993861 17003343 + Dmpk protein_coding processed_transcript MGP_WSBEiJ_T0080609.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16996747 16998611 + Dmpk protein_coding processed_transcript MGP_WSBEiJ_T0080610.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16996971 16998110 + Dmpk protein_coding processed_transcript MGP_WSBEiJ_T0080611.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16997089 17001234 + Dmpk protein_coding processed_transcript MGP_WSBEiJ_T0080612.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16997224 16998837 + Dmpk protein_coding retained_intron MGP_WSBEiJ_T0080613.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 16997663 17002511 + Dmpk protein_coding processed_transcript MGP_WSBEiJ_T0080614.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 17000949 17001828 + Dmpk protein_coding retained_intron MGP_WSBEiJ_T0080615.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 17001082 17002002 + Dmpk protein_coding processed_transcript MGP_WSBEiJ_T0080616.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 17001684 17003295 + Dmpk protein_coding processed_transcript MGP_WSBEiJ_T0080617.1 MGP_WSBEiJ_G0030903.1 mouse_genomes_project 7 17001762 17002667 + Dmpk protein_coding retained_intron MGP_WSBEiJ_T0080228.1 MGP_WSBEiJ_G0030766.1 mouse_genomes_project 7 3628670 3629623 + MGP_WSBEiJ_P0080228 protein_coding protein_coding MGP_WSBEiJ_T0084257.1 MGP_WSBEiJ_G0031883.1 mouse_genomes_project 7 108040666 108041754 - MGP_WSBEiJ_P0084257 protein_coding protein_coding MGP_WSBEiJ_T0086035.1 MGP_WSBEiJ_G0032308.1 mouse_genomes_project 7 144897737 144898795 - MGP_WSBEiJ_P0086035 Olfr524 protein_coding protein_coding MGP_WSBEiJ_T0085026.1 MGP_WSBEiJ_G0032108.1 mouse_genomes_project 7 129579130 129606714 + MGP_WSBEiJ_P0085026 Il21r protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085027.1 MGP_WSBEiJ_G0032108.1 mouse_genomes_project 7 129579177 129608509 + MGP_WSBEiJ_P0085027 Il21r protein_coding protein_coding MGP_WSBEiJ_T0081124.1 MGP_WSBEiJ_G0031049.1 mouse_genomes_project 7 25677273 25678680 - MGP_WSBEiJ_P0081124 Mia protein_coding protein_coding MGP_WSBEiJ_T0081125.1 MGP_WSBEiJ_G0031049.1 mouse_genomes_project 7 25677275 25678658 - Mia protein_coding retained_intron MGP_WSBEiJ_T0081126.1 MGP_WSBEiJ_G0031049.1 mouse_genomes_project 7 25677275 25678688 - MGP_WSBEiJ_P0081126 Mia protein_coding protein_coding MGP_WSBEiJ_T0081127.1 MGP_WSBEiJ_G0031049.1 mouse_genomes_project 7 25678020 25678527 - Mia protein_coding processed_transcript MGP_WSBEiJ_T0082631.1 MGP_WSBEiJ_G0031414.1 mouse_genomes_project 7 46640783 46720131 + MGP_WSBEiJ_P0082631 Otog protein_coding protein_coding MGP_WSBEiJ_T0083454.1 MGP_WSBEiJ_G0031588.1 mouse_genomes_project 7 83578922 83633610 - MGP_WSBEiJ_P0083454 Hdgfrp3 protein_coding protein_coding MGP_WSBEiJ_T0083455.1 MGP_WSBEiJ_G0031588.1 mouse_genomes_project 7 83589650 83633596 - MGP_WSBEiJ_P0083455 Hdgfrp3 protein_coding protein_coding MGP_WSBEiJ_T0083456.1 MGP_WSBEiJ_G0031588.1 mouse_genomes_project 7 83595451 83633159 - Hdgfrp3 protein_coding retained_intron MGP_WSBEiJ_T0008883.1 MGP_WSBEiJ_G0007156.1 mouse_genomes_project 7 131125863 131130590 + lincRNA lincRNA MGP_WSBEiJ_T0080083.1 MGP_WSBEiJ_G0030715.1 mouse_genomes_project 7 1551355 1580970 - MGP_WSBEiJ_P0080083 Ppp6r1 protein_coding protein_coding MGP_WSBEiJ_T0080084.1 MGP_WSBEiJ_G0030715.1 mouse_genomes_project 7 1558748 1564321 - Ppp6r1 protein_coding retained_intron MGP_WSBEiJ_T0080085.1 MGP_WSBEiJ_G0030715.1 mouse_genomes_project 7 1564715 1580941 - Ppp6r1 protein_coding retained_intron MGP_WSBEiJ_T0080086.1 MGP_WSBEiJ_G0030715.1 mouse_genomes_project 7 1565453 1567423 - MGP_WSBEiJ_P0080086 Ppp6r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080087.1 MGP_WSBEiJ_G0030715.1 mouse_genomes_project 7 1566294 1571553 - MGP_WSBEiJ_P0080087 Ppp6r1 protein_coding protein_coding MGP_WSBEiJ_T0080088.1 MGP_WSBEiJ_G0030715.1 mouse_genomes_project 7 1567375 1580932 - MGP_WSBEiJ_P0080088 Ppp6r1 protein_coding protein_coding MGP_WSBEiJ_T0080074.1 MGP_WSBEiJ_G0030712.1 mouse_genomes_project 7 1457804 1464497 - MGP_WSBEiJ_P0080074 Syt5 protein_coding protein_coding MGP_WSBEiJ_T0080075.1 MGP_WSBEiJ_G0030712.1 mouse_genomes_project 7 1463617 1465471 - MGP_WSBEiJ_P0080075 Syt5 protein_coding protein_coding MGP_WSBEiJ_T0080076.1 MGP_WSBEiJ_G0030712.1 mouse_genomes_project 7 1464222 1464903 - MGP_WSBEiJ_P0080076 Syt5 protein_coding protein_coding MGP_WSBEiJ_T0086054.1 MGP_WSBEiJ_G0032325.1 mouse_genomes_project 7 145459705 145460637 + MGP_WSBEiJ_P0086054 Olfr45 protein_coding protein_coding MGP_WSBEiJ_T0101004.1 MGP_WSBEiJ_G0039461.1 mouse_genomes_project 7 15389709 15397178 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083508.1 MGP_WSBEiJ_G0031603.1 mouse_genomes_project 7 85722913 85881824 - MGP_WSBEiJ_P0083508 Cemip protein_coding protein_coding MGP_WSBEiJ_T0083509.1 MGP_WSBEiJ_G0031603.1 mouse_genomes_project 7 85725128 85734692 - Cemip protein_coding retained_intron MGP_WSBEiJ_T0083510.1 MGP_WSBEiJ_G0031603.1 mouse_genomes_project 7 85738499 85881824 - Cemip protein_coding retained_intron MGP_WSBEiJ_T0083511.1 MGP_WSBEiJ_G0031603.1 mouse_genomes_project 7 85742413 85768132 - Cemip protein_coding retained_intron MGP_WSBEiJ_T0083512.1 MGP_WSBEiJ_G0031603.1 mouse_genomes_project 7 85752706 85881824 - Cemip protein_coding retained_intron MGP_WSBEiJ_T0008743.1 MGP_WSBEiJ_G0007068.1 mouse_genomes_project 7 67001774 67002346 - Gm45081 lincRNA lincRNA MGP_WSBEiJ_T0086330.1 MGP_WSBEiJ_G0032383.1 mouse_genomes_project 7 146966689 146982699 - MGP_WSBEiJ_P0086330 Dusp8 protein_coding protein_coding MGP_WSBEiJ_T0086331.1 MGP_WSBEiJ_G0032383.1 mouse_genomes_project 7 146971020 146983270 - MGP_WSBEiJ_P0086331 Dusp8 protein_coding protein_coding MGP_WSBEiJ_T0086137.1 MGP_WSBEiJ_G0032351.1 mouse_genomes_project 7 145994447 146002990 - MGP_WSBEiJ_P0086137 Rnh1 protein_coding protein_coding MGP_WSBEiJ_T0086138.1 MGP_WSBEiJ_G0032351.1 mouse_genomes_project 7 145994447 146006889 - MGP_WSBEiJ_P0086138 Rnh1 protein_coding protein_coding MGP_WSBEiJ_T0008773.1 MGP_WSBEiJ_G0007091.1 mouse_genomes_project 7 74860538 74861273 - Gm44738 lincRNA lincRNA MGP_WSBEiJ_T0082656.1 MGP_WSBEiJ_G0031420.1 mouse_genomes_project 7 47144454 47149850 - MGP_WSBEiJ_P0082656 Saa3 protein_coding protein_coding MGP_WSBEiJ_T0081389.1 MGP_WSBEiJ_G0031116.1 mouse_genomes_project 7 27688938 27699712 - MGP_WSBEiJ_P0081389 Eif3k protein_coding protein_coding MGP_WSBEiJ_T0005113.1 MGP_WSBEiJ_G0004351.1 mouse_genomes_project 7 30056748 30060905 + G630030J09Rik antisense antisense MGP_WSBEiJ_T0082607.1 MGP_WSBEiJ_G0031408.1 mouse_genomes_project 7 46303883 46311122 + MGP_WSBEiJ_P0082607 Ccdc114 protein_coding protein_coding MGP_WSBEiJ_T0082608.1 MGP_WSBEiJ_G0031408.1 mouse_genomes_project 7 46304027 46304879 + Ccdc114 protein_coding retained_intron MGP_WSBEiJ_T0082609.1 MGP_WSBEiJ_G0031408.1 mouse_genomes_project 7 46304054 46311128 + MGP_WSBEiJ_P0082609 Ccdc114 protein_coding protein_coding MGP_WSBEiJ_T0082610.1 MGP_WSBEiJ_G0031408.1 mouse_genomes_project 7 46304054 46315166 + MGP_WSBEiJ_P0082610 Ccdc114 protein_coding protein_coding MGP_WSBEiJ_T0082611.1 MGP_WSBEiJ_G0031408.1 mouse_genomes_project 7 46304331 46328882 + MGP_WSBEiJ_P0082611 Ccdc114 protein_coding protein_coding MGP_WSBEiJ_T0080261.1 MGP_WSBEiJ_G0030787.1 mouse_genomes_project 7 7985727 7987763 - MGP_WSBEiJ_P0080261 Vmn1r71 protein_coding protein_coding MGP_WSBEiJ_T0084062.1 MGP_WSBEiJ_G0031747.1 mouse_genomes_project 7 104872730 104878167 - MGP_WSBEiJ_P0084062 Chrna10 protein_coding protein_coding MGP_WSBEiJ_T0084165.1 MGP_WSBEiJ_G0031819.1 mouse_genomes_project 7 106635212 106636651 - MGP_WSBEiJ_P0084165 Olfr69 protein_coding protein_coding MGP_WSBEiJ_T0081681.1 MGP_WSBEiJ_G0031179.1 mouse_genomes_project 7 29426423 29429685 - MGP_WSBEiJ_P0081681 Zbtb32 protein_coding protein_coding MGP_WSBEiJ_T0081682.1 MGP_WSBEiJ_G0031179.1 mouse_genomes_project 7 29426425 29435614 - MGP_WSBEiJ_P0081682 Zbtb32 protein_coding protein_coding MGP_WSBEiJ_T0081683.1 MGP_WSBEiJ_G0031179.1 mouse_genomes_project 7 29434676 29435654 - Zbtb32 protein_coding processed_transcript MGP_WSBEiJ_T0080769.1 MGP_WSBEiJ_G0030947.1 mouse_genomes_project 7 17890502 17910336 - MGP_WSBEiJ_P0080769 Pvr protein_coding protein_coding MGP_WSBEiJ_T0080770.1 MGP_WSBEiJ_G0030947.1 mouse_genomes_project 7 17891996 17897352 - Pvr protein_coding retained_intron MGP_WSBEiJ_T0080771.1 MGP_WSBEiJ_G0030947.1 mouse_genomes_project 7 17903523 17910289 - Pvr protein_coding retained_intron MGP_WSBEiJ_T0080772.1 MGP_WSBEiJ_G0030947.1 mouse_genomes_project 7 17905030 17910289 - Pvr protein_coding retained_intron MGP_WSBEiJ_T0081001.1 MGP_WSBEiJ_G0031013.1 mouse_genomes_project 7 23665336 23683216 - MGP_WSBEiJ_P0081001 Lipe protein_coding protein_coding MGP_WSBEiJ_T0081002.1 MGP_WSBEiJ_G0031013.1 mouse_genomes_project 7 23665348 23686354 - MGP_WSBEiJ_P0081002 Lipe protein_coding protein_coding MGP_WSBEiJ_T0081003.1 MGP_WSBEiJ_G0031013.1 mouse_genomes_project 7 23670723 23672497 - MGP_WSBEiJ_P0081003 Lipe protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081004.1 MGP_WSBEiJ_G0031013.1 mouse_genomes_project 7 23670744 23671379 - Lipe protein_coding retained_intron MGP_WSBEiJ_T0081005.1 MGP_WSBEiJ_G0031013.1 mouse_genomes_project 7 23676140 23678085 - MGP_WSBEiJ_P0081005 Lipe protein_coding protein_coding MGP_WSBEiJ_T0081006.1 MGP_WSBEiJ_G0031013.1 mouse_genomes_project 7 23685102 23686353 - MGP_WSBEiJ_P0081006 Lipe protein_coding protein_coding MGP_WSBEiJ_T0079881.1 MGP_WSBEiJ_G0030679.1 mouse_genomes_project 7 29994 40646 - AU018091 protein_coding processed_transcript MGP_WSBEiJ_T0079882.1 MGP_WSBEiJ_G0030679.1 mouse_genomes_project 7 29994 44819 - MGP_WSBEiJ_P0079882 AU018091 protein_coding protein_coding MGP_WSBEiJ_T0079883.1 MGP_WSBEiJ_G0030679.1 mouse_genomes_project 7 38594 44724 - MGP_WSBEiJ_P0079883 AU018091 protein_coding protein_coding MGP_WSBEiJ_T0086530.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149538159 149620273 - MGP_WSBEiJ_P0086530 Ppfia1 protein_coding protein_coding MGP_WSBEiJ_T0086531.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149538160 149550738 - Ppfia1 protein_coding retained_intron MGP_WSBEiJ_T0086532.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149538167 149575911 - MGP_WSBEiJ_P0086532 Ppfia1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086533.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149538379 149619080 - MGP_WSBEiJ_P0086533 Ppfia1 protein_coding protein_coding MGP_WSBEiJ_T0086534.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149543827 149548170 - Ppfia1 protein_coding processed_transcript MGP_WSBEiJ_T0086535.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149560191 149562909 - Ppfia1 protein_coding retained_intron MGP_WSBEiJ_T0086536.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149568558 149571321 - Ppfia1 protein_coding retained_intron MGP_WSBEiJ_T0086537.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149582871 149618905 - MGP_WSBEiJ_P0086537 Ppfia1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086538.1 MGP_WSBEiJ_G0032421.1 mouse_genomes_project 7 149583896 149587970 - Ppfia1 protein_coding retained_intron MGP_WSBEiJ_T0086057.1 MGP_WSBEiJ_G0032328.1 mouse_genomes_project 7 145543602 145554226 - MGP_WSBEiJ_P0086057 Syce1 protein_coding protein_coding MGP_WSBEiJ_T0005118.1 MGP_WSBEiJ_G0004354.1 mouse_genomes_project 7 33680243 33686364 + Gm12764 antisense antisense MGP_WSBEiJ_T0081037.1 MGP_WSBEiJ_G0031023.1 mouse_genomes_project 7 24019436 24025217 + MGP_WSBEiJ_P0081037 B9d2 protein_coding protein_coding MGP_WSBEiJ_T0081038.1 MGP_WSBEiJ_G0031023.1 mouse_genomes_project 7 24019494 24022285 + MGP_WSBEiJ_P0081038 B9d2 protein_coding protein_coding MGP_WSBEiJ_T0081039.1 MGP_WSBEiJ_G0031023.1 mouse_genomes_project 7 24019512 24022056 + MGP_WSBEiJ_P0081039 B9d2 protein_coding protein_coding MGP_WSBEiJ_T0081040.1 MGP_WSBEiJ_G0031023.1 mouse_genomes_project 7 24019814 24025217 + MGP_WSBEiJ_P0081040 B9d2 protein_coding protein_coding MGP_WSBEiJ_T0086552.1 MGP_WSBEiJ_G0032427.1 mouse_genomes_project 7 149995641 150011718 + MGP_WSBEiJ_P0086552 Oraov1 protein_coding protein_coding MGP_WSBEiJ_T0086553.1 MGP_WSBEiJ_G0032427.1 mouse_genomes_project 7 149995680 150001671 + MGP_WSBEiJ_P0086553 Oraov1 protein_coding protein_coding MGP_WSBEiJ_T0086554.1 MGP_WSBEiJ_G0032427.1 mouse_genomes_project 7 149995716 149998247 + Oraov1 protein_coding retained_intron MGP_WSBEiJ_T0086555.1 MGP_WSBEiJ_G0032427.1 mouse_genomes_project 7 149995718 149997003 + Oraov1 protein_coding processed_transcript MGP_WSBEiJ_T0086556.1 MGP_WSBEiJ_G0032427.1 mouse_genomes_project 7 149995725 150010460 + MGP_WSBEiJ_P0086556 Oraov1 protein_coding protein_coding MGP_WSBEiJ_T0086557.1 MGP_WSBEiJ_G0032427.1 mouse_genomes_project 7 149996681 150000366 + Oraov1 protein_coding retained_intron MGP_WSBEiJ_T0082289.1 MGP_WSBEiJ_G0031322.1 mouse_genomes_project 7 44817855 44834837 + Napsa protein_coding retained_intron MGP_WSBEiJ_T0082290.1 MGP_WSBEiJ_G0031322.1 mouse_genomes_project 7 44817855 44838501 + MGP_WSBEiJ_P0082290 Napsa protein_coding protein_coding MGP_WSBEiJ_T0080014.1 MGP_WSBEiJ_G0030702.1 mouse_genomes_project 7 1077556 1092966 - MGP_WSBEiJ_P0080014 1700027J19Rik protein_coding protein_coding MGP_WSBEiJ_T0080015.1 MGP_WSBEiJ_G0030702.1 mouse_genomes_project 7 1077847 1092645 - MGP_WSBEiJ_P0080015 1700027J19Rik protein_coding protein_coding MGP_WSBEiJ_T0080016.1 MGP_WSBEiJ_G0030702.1 mouse_genomes_project 7 1078072 1092548 - MGP_WSBEiJ_P0080016 1700027J19Rik protein_coding protein_coding MGP_WSBEiJ_T0084176.1 MGP_WSBEiJ_G0031830.1 mouse_genomes_project 7 106804470 106805424 + MGP_WSBEiJ_P0084176 Olfr632 protein_coding protein_coding MGP_WSBEiJ_T0085671.1 MGP_WSBEiJ_G0032223.1 mouse_genomes_project 7 132800667 132863032 + Inpp5f protein_coding processed_transcript MGP_WSBEiJ_T0085672.1 MGP_WSBEiJ_G0032223.1 mouse_genomes_project 7 132800699 132887763 + MGP_WSBEiJ_P0085672 Inpp5f protein_coding protein_coding MGP_WSBEiJ_T0085673.1 MGP_WSBEiJ_G0032223.1 mouse_genomes_project 7 132850376 132868862 + Inpp5f protein_coding retained_intron MGP_WSBEiJ_T0085674.1 MGP_WSBEiJ_G0032223.1 mouse_genomes_project 7 132855056 132859971 + Inpp5f protein_coding processed_transcript MGP_WSBEiJ_T0085675.1 MGP_WSBEiJ_G0032223.1 mouse_genomes_project 7 132859093 132860176 + Inpp5f protein_coding retained_intron MGP_WSBEiJ_T0085676.1 MGP_WSBEiJ_G0032223.1 mouse_genomes_project 7 132871073 132887612 + Inpp5f protein_coding retained_intron MGP_WSBEiJ_T0085677.1 MGP_WSBEiJ_G0032223.1 mouse_genomes_project 7 132879835 132885005 + MGP_WSBEiJ_P0085677 Inpp5f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085678.1 MGP_WSBEiJ_G0032223.1 mouse_genomes_project 7 132880595 132887614 + MGP_WSBEiJ_P0085678 Inpp5f protein_coding protein_coding MGP_WSBEiJ_T0082764.1 MGP_WSBEiJ_G0031454.1 mouse_genomes_project 7 52319625 52407385 + MGP_WSBEiJ_P0082764 Ano5 protein_coding protein_coding MGP_WSBEiJ_T0082765.1 MGP_WSBEiJ_G0031454.1 mouse_genomes_project 7 52320384 52407385 + MGP_WSBEiJ_P0082765 Ano5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083921.1 MGP_WSBEiJ_G0031725.1 mouse_genomes_project 7 103801090 103994215 + MGP_WSBEiJ_P0083921 Fchsd2 protein_coding protein_coding MGP_WSBEiJ_T0083922.1 MGP_WSBEiJ_G0031725.1 mouse_genomes_project 7 103801091 103903505 + Fchsd2 protein_coding processed_transcript MGP_WSBEiJ_T0083923.1 MGP_WSBEiJ_G0031725.1 mouse_genomes_project 7 103801096 103994238 + MGP_WSBEiJ_P0083923 Fchsd2 protein_coding protein_coding MGP_WSBEiJ_T0083924.1 MGP_WSBEiJ_G0031725.1 mouse_genomes_project 7 103801120 103900540 + Fchsd2 protein_coding retained_intron MGP_WSBEiJ_T0083925.1 MGP_WSBEiJ_G0031725.1 mouse_genomes_project 7 103801195 103889571 + Fchsd2 protein_coding processed_transcript MGP_WSBEiJ_T0083926.1 MGP_WSBEiJ_G0031725.1 mouse_genomes_project 7 103801197 103836860 + Fchsd2 protein_coding retained_intron MGP_WSBEiJ_T0083927.1 MGP_WSBEiJ_G0031725.1 mouse_genomes_project 7 103852455 103992366 + MGP_WSBEiJ_P0083927 Fchsd2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083928.1 MGP_WSBEiJ_G0031725.1 mouse_genomes_project 7 103947279 103958350 + Fchsd2 protein_coding retained_intron MGP_WSBEiJ_T0084907.1 MGP_WSBEiJ_G0032085.1 mouse_genomes_project 7 125706255 125709190 - Cog7 protein_coding retained_intron MGP_WSBEiJ_T0084908.1 MGP_WSBEiJ_G0032085.1 mouse_genomes_project 7 125706694 125811233 - MGP_WSBEiJ_P0084908 Cog7 protein_coding protein_coding MGP_WSBEiJ_T0084910.1 MGP_WSBEiJ_G0032085.1 mouse_genomes_project 7 125750991 125811233 - MGP_WSBEiJ_P0084910 Cog7 protein_coding protein_coding MGP_WSBEiJ_T0084911.1 MGP_WSBEiJ_G0032085.1 mouse_genomes_project 7 125757001 125811216 - Cog7 protein_coding retained_intron MGP_WSBEiJ_T0099705.1 MGP_WSBEiJ_G0038368.1 mouse_genomes_project 7 44470910 44471001 + Gm26247 snoRNA snoRNA MGP_WSBEiJ_T0008887.1 MGP_WSBEiJ_G0007159.1 mouse_genomes_project 7 131806077 131820281 + lincRNA lincRNA MGP_WSBEiJ_T0008888.1 MGP_WSBEiJ_G0007159.1 mouse_genomes_project 7 131817215 131820891 + lincRNA lincRNA MGP_WSBEiJ_T0080347.1 MGP_WSBEiJ_G0030821.1 mouse_genomes_project 7 10477559 10478510 + MGP_WSBEiJ_P0080347 Vmn1r88 protein_coding protein_coding MGP_WSBEiJ_T0084373.1 MGP_WSBEiJ_G0031914.1 mouse_genomes_project 7 109822260 109823196 - MGP_WSBEiJ_P0084373 Olfr698 protein_coding protein_coding MGP_WSBEiJ_T0101099.1 MGP_WSBEiJ_G0039556.1 mouse_genomes_project 7 105914394 105915342 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085089.1 MGP_WSBEiJ_G0032117.1 mouse_genomes_project 7 130424678 130431062 - Cd19 protein_coding retained_intron MGP_WSBEiJ_T0085090.1 MGP_WSBEiJ_G0032117.1 mouse_genomes_project 7 130424679 130431083 - MGP_WSBEiJ_P0085090 Cd19 protein_coding protein_coding MGP_WSBEiJ_T0085091.1 MGP_WSBEiJ_G0032117.1 mouse_genomes_project 7 130424679 130431066 - MGP_WSBEiJ_P0085091 Cd19 protein_coding protein_coding MGP_WSBEiJ_T0085092.1 MGP_WSBEiJ_G0032117.1 mouse_genomes_project 7 130425590 130426025 - Cd19 protein_coding retained_intron MGP_WSBEiJ_T0085093.1 MGP_WSBEiJ_G0032117.1 mouse_genomes_project 7 130429859 130430748 - Cd19 protein_coding retained_intron MGP_WSBEiJ_T0098483.1 MGP_WSBEiJ_G0037146.1 mouse_genomes_project 7 56576310 56576372 + Gm26482 snRNA snRNA MGP_WSBEiJ_T0085739.1 MGP_WSBEiJ_G0032231.1 mouse_genomes_project 7 134844959 135035605 + MGP_WSBEiJ_P0085739 Tacc2 protein_coding protein_coding MGP_WSBEiJ_T0085740.1 MGP_WSBEiJ_G0032231.1 mouse_genomes_project 7 134844959 135035603 + MGP_WSBEiJ_P0085740 Tacc2 protein_coding protein_coding MGP_WSBEiJ_T0085741.1 MGP_WSBEiJ_G0032231.1 mouse_genomes_project 7 134960306 135035605 + MGP_WSBEiJ_P0085741 Tacc2 protein_coding protein_coding MGP_WSBEiJ_T0085742.1 MGP_WSBEiJ_G0032231.1 mouse_genomes_project 7 134960670 135035140 + MGP_WSBEiJ_P0085742 Tacc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0017823.1 MGP_WSBEiJ_G0015115.1 mouse_genomes_project 7 132583243 132585269 - Gm15503 processed_transcript retained_intron MGP_WSBEiJ_T0017824.1 MGP_WSBEiJ_G0015115.1 mouse_genomes_project 7 132584695 132586617 - Gm15503 processed_transcript sense_intronic MGP_WSBEiJ_T0083532.1 MGP_WSBEiJ_G0031617.1 mouse_genomes_project 7 88431212 88432224 - MGP_WSBEiJ_P0083532 Olfr307 protein_coding protein_coding MGP_WSBEiJ_T0082658.1 MGP_WSBEiJ_G0031422.1 mouse_genomes_project 7 47173798 47177466 - MGP_WSBEiJ_P0082658 Saa2 protein_coding protein_coding MGP_WSBEiJ_T0002182.1 MGP_WSBEiJ_G0002101.1 mouse_genomes_project 7 44617603 44620358 + TEC TEC MGP_WSBEiJ_T0083457.1 MGP_WSBEiJ_G0031589.1 mouse_genomes_project 7 83667901 83693612 - MGP_WSBEiJ_P0083457 Bnc1 protein_coding protein_coding MGP_WSBEiJ_T0080233.1 MGP_WSBEiJ_G0030771.1 mouse_genomes_project 7 3741052 3741979 + MGP_WSBEiJ_P0080233 Olfr1350 protein_coding protein_coding MGP_WSBEiJ_T0080792.1 MGP_WSBEiJ_G0030962.1 mouse_genomes_project 7 22025530 22026502 + MGP_WSBEiJ_P0080792 Vmn1r179 protein_coding protein_coding MGP_WSBEiJ_T0080311.1 MGP_WSBEiJ_G0030812.1 mouse_genomes_project 7 10262835 10263604 - Slc27a5 protein_coding processed_transcript MGP_WSBEiJ_T0080312.1 MGP_WSBEiJ_G0030812.1 mouse_genomes_project 7 10262835 10286586 - MGP_WSBEiJ_P0080312 Slc27a5 protein_coding protein_coding MGP_WSBEiJ_T0080313.1 MGP_WSBEiJ_G0030812.1 mouse_genomes_project 7 10262841 10286628 - MGP_WSBEiJ_P0080313 Slc27a5 protein_coding protein_coding MGP_WSBEiJ_T0080319.1 MGP_WSBEiJ_G0030812.1 mouse_genomes_project 7 10281753 10284995 - Slc27a5 protein_coding retained_intron MGP_WSBEiJ_T0080320.1 MGP_WSBEiJ_G0030812.1 mouse_genomes_project 7 10281753 10286113 - MGP_WSBEiJ_P0080320 Slc27a5 protein_coding protein_coding MGP_WSBEiJ_T0098506.1 MGP_WSBEiJ_G0037169.1 mouse_genomes_project 7 115315634 115315784 - Gm23345 snRNA snRNA MGP_WSBEiJ_T0008715.1 MGP_WSBEiJ_G0007047.1 mouse_genomes_project 7 40336426 40344929 + 4933402C06Rik lincRNA lincRNA MGP_WSBEiJ_T0008716.1 MGP_WSBEiJ_G0007047.1 mouse_genomes_project 7 40336426 40353378 + 4933402C06Rik lincRNA lincRNA MGP_WSBEiJ_T0008822.1 MGP_WSBEiJ_G0007120.1 mouse_genomes_project 7 96443749 96766058 + lincRNA lincRNA MGP_WSBEiJ_T0008823.1 MGP_WSBEiJ_G0007120.1 mouse_genomes_project 7 96443810 97148134 + lincRNA lincRNA MGP_WSBEiJ_T0008698.1 MGP_WSBEiJ_G0007036.1 mouse_genomes_project 7 36625487 36628852 - Gm28076 lincRNA lincRNA MGP_WSBEiJ_T0083115.1 MGP_WSBEiJ_G0031526.1 mouse_genomes_project 7 77586790 78518339 + MGP_WSBEiJ_P0083115 Agbl1 protein_coding protein_coding MGP_WSBEiJ_T0083116.1 MGP_WSBEiJ_G0031526.1 mouse_genomes_project 7 77762545 78078101 + MGP_WSBEiJ_P0083116 Agbl1 protein_coding protein_coding MGP_WSBEiJ_T0083117.1 MGP_WSBEiJ_G0031526.1 mouse_genomes_project 7 77762545 78142255 + MGP_WSBEiJ_P0083117 Agbl1 protein_coding protein_coding MGP_WSBEiJ_T0015255.1 MGP_WSBEiJ_G0013385.1 mouse_genomes_project 7 24140234 24140850 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085605.1 MGP_WSBEiJ_G0032211.1 mouse_genomes_project 7 132279082 132300580 + MGP_WSBEiJ_P0085605 Itgax protein_coding unknown_likely_coding MGP_WSBEiJ_T0085606.1 MGP_WSBEiJ_G0032211.1 mouse_genomes_project 7 132279143 132300573 + MGP_WSBEiJ_P0085606 Itgax protein_coding protein_coding MGP_WSBEiJ_T0085607.1 MGP_WSBEiJ_G0032211.1 mouse_genomes_project 7 132279147 132283803 + MGP_WSBEiJ_P0085607 Itgax protein_coding protein_coding MGP_WSBEiJ_T0085608.1 MGP_WSBEiJ_G0032211.1 mouse_genomes_project 7 132284507 132285214 + Itgax protein_coding retained_intron MGP_WSBEiJ_T0085609.1 MGP_WSBEiJ_G0032211.1 mouse_genomes_project 7 132297380 132298129 + Itgax protein_coding retained_intron MGP_WSBEiJ_T0086065.1 MGP_WSBEiJ_G0032331.1 mouse_genomes_project 7 145622010 145623233 + MGP_WSBEiJ_P0086065 Scgb1c1 protein_coding protein_coding MGP_WSBEiJ_T0082481.1 MGP_WSBEiJ_G0031377.1 mouse_genomes_project 7 45815383 45832853 - MGP_WSBEiJ_P0082481 Dhdh protein_coding protein_coding MGP_WSBEiJ_T0082482.1 MGP_WSBEiJ_G0031377.1 mouse_genomes_project 7 45817484 45821178 - Dhdh protein_coding processed_transcript MGP_WSBEiJ_T0010690.1 MGP_WSBEiJ_G0008847.1 mouse_genomes_project 7 45488954 45489013 + Mir7055 miRNA miRNA MGP_WSBEiJ_T0080191.1 MGP_WSBEiJ_G0030754.1 mouse_genomes_project 7 3093075 3097202 - MGP_WSBEiJ_P0080191 Vmn1r65 protein_coding protein_coding MGP_WSBEiJ_T0083419.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83009110 83117828 - MGP_WSBEiJ_P0083419 Cpeb1 protein_coding protein_coding MGP_WSBEiJ_T0083420.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83009112 83099489 - MGP_WSBEiJ_P0083420 Cpeb1 protein_coding protein_coding MGP_WSBEiJ_T0083421.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83009113 83117828 - MGP_WSBEiJ_P0083421 Cpeb1 protein_coding protein_coding MGP_WSBEiJ_T0083422.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83011405 83012595 - Cpeb1 protein_coding retained_intron MGP_WSBEiJ_T0083423.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83011686 83018080 - Cpeb1 protein_coding processed_transcript MGP_WSBEiJ_T0083424.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83023679 83035007 - Cpeb1 protein_coding retained_intron MGP_WSBEiJ_T0083425.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83023679 83118535 - Cpeb1 protein_coding processed_transcript MGP_WSBEiJ_T0083426.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83023843 83035051 - Cpeb1 protein_coding processed_transcript MGP_WSBEiJ_T0083427.1 MGP_WSBEiJ_G0031578.1 mouse_genomes_project 7 83099335 83118462 - Cpeb1 protein_coding processed_transcript MGP_WSBEiJ_T0080526.1 MGP_WSBEiJ_G0030873.1 mouse_genomes_project 7 14612288 14616432 + MGP_WSBEiJ_P0080526 Pnmal2 protein_coding protein_coding MGP_WSBEiJ_T0080445.1 MGP_WSBEiJ_G0030853.1 mouse_genomes_project 7 13849803 13866863 - MGP_WSBEiJ_P0080445 C5ar1 protein_coding protein_coding MGP_WSBEiJ_T0080446.1 MGP_WSBEiJ_G0030853.1 mouse_genomes_project 7 13849805 13866661 - MGP_WSBEiJ_P0080446 C5ar1 protein_coding protein_coding MGP_WSBEiJ_T0099714.1 MGP_WSBEiJ_G0038377.1 mouse_genomes_project 7 45716826 45716980 + Gm22478 snoRNA snoRNA MGP_WSBEiJ_T0008902.1 MGP_WSBEiJ_G0007172.1 mouse_genomes_project 7 138865811 138941545 - Gm4593 lincRNA lincRNA MGP_WSBEiJ_T0008903.1 MGP_WSBEiJ_G0007172.1 mouse_genomes_project 7 138940751 138943710 - Gm4593 lincRNA lincRNA MGP_WSBEiJ_T0005056.1 MGP_WSBEiJ_G0004312.1 mouse_genomes_project 7 297329 306642 - Gm44151 antisense antisense MGP_WSBEiJ_T0010685.1 MGP_WSBEiJ_G0008842.1 mouse_genomes_project 7 44777853 44777926 - Mir7053 miRNA miRNA MGP_WSBEiJ_T0008851.1 MGP_WSBEiJ_G0007137.1 mouse_genomes_project 7 118532913 118569363 + Gm44944 lincRNA lincRNA MGP_WSBEiJ_T0008852.1 MGP_WSBEiJ_G0007137.1 mouse_genomes_project 7 118566613 118569652 + Gm44944 lincRNA lincRNA MGP_WSBEiJ_T0008853.1 MGP_WSBEiJ_G0007137.1 mouse_genomes_project 7 118569376 118569681 + Gm44944 lincRNA lincRNA MGP_WSBEiJ_T0015334.1 MGP_WSBEiJ_G0013464.1 mouse_genomes_project 7 74948669 74949035 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101025.1 MGP_WSBEiJ_G0039482.1 mouse_genomes_project 7 33161349 33162326 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080245.1 MGP_WSBEiJ_G0030775.1 mouse_genomes_project 7 4306685 4315572 - MGP_WSBEiJ_P0080245 Zfp954 protein_coding protein_coding MGP_WSBEiJ_T0082181.1 MGP_WSBEiJ_G0031299.1 mouse_genomes_project 7 44180415 44409253 + MGP_WSBEiJ_P0082181 protein_coding protein_coding MGP_WSBEiJ_T0084651.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118223623 118270972 + MGP_WSBEiJ_P0084651 Insc protein_coding protein_coding MGP_WSBEiJ_T0084652.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118225669 118271250 + MGP_WSBEiJ_P0084652 Insc protein_coding protein_coding MGP_WSBEiJ_T0084653.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118225695 118333630 + MGP_WSBEiJ_P0084653 Insc protein_coding protein_coding MGP_WSBEiJ_T0084654.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118233654 118248935 + Insc protein_coding retained_intron MGP_WSBEiJ_T0084655.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118248325 118333633 + MGP_WSBEiJ_P0084655 Insc protein_coding protein_coding MGP_WSBEiJ_T0084656.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118248363 118271009 + MGP_WSBEiJ_P0084656 Insc protein_coding protein_coding MGP_WSBEiJ_T0084657.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118250886 118271145 + Insc protein_coding processed_transcript MGP_WSBEiJ_T0084658.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118272006 118333630 + Insc protein_coding retained_intron MGP_WSBEiJ_T0084659.1 MGP_WSBEiJ_G0032025.1 mouse_genomes_project 7 118273919 118312458 + MGP_WSBEiJ_P0084659 Insc protein_coding protein_coding MGP_WSBEiJ_T0086432.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148001406 148015846 + MGP_WSBEiJ_P0086432 Tspan32 protein_coding protein_coding MGP_WSBEiJ_T0086433.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148001409 148003836 + Tspan32 protein_coding retained_intron MGP_WSBEiJ_T0086434.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148001987 148016004 + MGP_WSBEiJ_P0086434 Tspan32 protein_coding protein_coding MGP_WSBEiJ_T0086435.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148002012 148015843 + MGP_WSBEiJ_P0086435 Tspan32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086436.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148002020 148015846 + MGP_WSBEiJ_P0086436 Tspan32 protein_coding protein_coding MGP_WSBEiJ_T0086437.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148002034 148015846 + MGP_WSBEiJ_P0086437 Tspan32 protein_coding protein_coding MGP_WSBEiJ_T0086438.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148002048 148015846 + MGP_WSBEiJ_P0086438 Tspan32 protein_coding protein_coding MGP_WSBEiJ_T0086439.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148002048 148015846 + MGP_WSBEiJ_P0086439 Tspan32 protein_coding protein_coding MGP_WSBEiJ_T0086440.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148002277 148014033 + MGP_WSBEiJ_P0086440 Tspan32 protein_coding protein_coding MGP_WSBEiJ_T0086441.1 MGP_WSBEiJ_G0032400.1 mouse_genomes_project 7 148013768 148015263 + Tspan32 protein_coding retained_intron MGP_WSBEiJ_T0082015.1 MGP_WSBEiJ_G0031246.1 mouse_genomes_project 7 36169051 36249254 + MGP_WSBEiJ_P0082015 Tshz3 protein_coding protein_coding MGP_WSBEiJ_T0010687.1 MGP_WSBEiJ_G0008844.1 mouse_genomes_project 7 45305372 45305434 - Mir7054 miRNA miRNA MGP_WSBEiJ_T0083595.1 MGP_WSBEiJ_G0031647.1 mouse_genomes_project 7 92378681 92460591 + MGP_WSBEiJ_P0083595 Picalm protein_coding protein_coding MGP_WSBEiJ_T0083596.1 MGP_WSBEiJ_G0031647.1 mouse_genomes_project 7 92378986 92460594 + MGP_WSBEiJ_P0083596 Picalm protein_coding unknown_likely_coding MGP_WSBEiJ_T0015286.1 MGP_WSBEiJ_G0013416.1 mouse_genomes_project 7 41479644 41480282 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002270.1 MGP_WSBEiJ_G0002188.1 mouse_genomes_project 7 132026662 132027371 + TEC TEC MGP_WSBEiJ_T0005187.1 MGP_WSBEiJ_G0004402.1 mouse_genomes_project 7 107163158 107173308 + Gm15133 antisense antisense MGP_WSBEiJ_T0005188.1 MGP_WSBEiJ_G0004402.1 mouse_genomes_project 7 107163159 107173479 + Gm15133 antisense antisense MGP_WSBEiJ_T0084274.1 MGP_WSBEiJ_G0031893.1 mouse_genomes_project 7 108268407 108272579 + MGP_WSBEiJ_P0084274 Cnga4 protein_coding protein_coding MGP_WSBEiJ_T0017796.1 MGP_WSBEiJ_G0015100.1 mouse_genomes_project 7 82696810 82704737 + Platr32 processed_transcript processed_transcript MGP_WSBEiJ_T0083520.1 MGP_WSBEiJ_G0031607.1 mouse_genomes_project 7 86418947 86483278 - MGP_WSBEiJ_P0083520 Zfand6 protein_coding protein_coding MGP_WSBEiJ_T0083521.1 MGP_WSBEiJ_G0031607.1 mouse_genomes_project 7 86418947 86483288 - MGP_WSBEiJ_P0083521 Zfand6 protein_coding protein_coding MGP_WSBEiJ_T0085456.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131692372 131703255 + MGP_WSBEiJ_P0085456 protein_coding unknown_likely_coding MGP_WSBEiJ_T0085457.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131692565 131698599 + protein_coding retained_intron MGP_WSBEiJ_T0085458.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131692605 131702399 + MGP_WSBEiJ_P0085458 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085459.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131692627 131702399 + MGP_WSBEiJ_P0085459 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085460.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131692629 131699238 + protein_coding retained_intron MGP_WSBEiJ_T0085461.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131693641 131702350 + protein_coding retained_intron MGP_WSBEiJ_T0085462.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131693641 131703257 + MGP_WSBEiJ_P0085462 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085463.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131697952 131703252 + MGP_WSBEiJ_P0085463 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085464.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131699233 131702371 + protein_coding retained_intron MGP_WSBEiJ_T0085465.1 MGP_WSBEiJ_G0032183.1 mouse_genomes_project 7 131702047 131702638 + protein_coding retained_intron MGP_WSBEiJ_T0011491.1 MGP_WSBEiJ_G0009648.1 mouse_genomes_project 7 97601089 97601382 + Gm23884 misc_RNA misc_RNA MGP_WSBEiJ_T0015288.1 MGP_WSBEiJ_G0013418.1 mouse_genomes_project 7 42142886 42142993 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082832.1 MGP_WSBEiJ_G0031468.1 mouse_genomes_project 7 57126769 57419670 + MGP_WSBEiJ_P0082832 Oca2 protein_coding protein_coding MGP_WSBEiJ_T0082833.1 MGP_WSBEiJ_G0031468.1 mouse_genomes_project 7 57126770 57142014 + MGP_WSBEiJ_P0082833 Oca2 protein_coding protein_coding MGP_WSBEiJ_T0082834.1 MGP_WSBEiJ_G0031468.1 mouse_genomes_project 7 57126786 57419417 + MGP_WSBEiJ_P0082834 Oca2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082835.1 MGP_WSBEiJ_G0031468.1 mouse_genomes_project 7 57126790 57162291 + MGP_WSBEiJ_P0082835 Oca2 protein_coding protein_coding MGP_WSBEiJ_T0082836.1 MGP_WSBEiJ_G0031468.1 mouse_genomes_project 7 57126817 57419665 + MGP_WSBEiJ_P0082836 Oca2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082837.1 MGP_WSBEiJ_G0031468.1 mouse_genomes_project 7 57190539 57209766 + Oca2 protein_coding processed_transcript MGP_WSBEiJ_T0084252.1 MGP_WSBEiJ_G0031878.1 mouse_genomes_project 7 107962123 107963065 + MGP_WSBEiJ_P0084252 Olfr678 protein_coding protein_coding MGP_WSBEiJ_T0005103.1 MGP_WSBEiJ_G0004342.1 mouse_genomes_project 7 28335888 28338339 - Gm29326 antisense antisense MGP_WSBEiJ_T0083101.1 MGP_WSBEiJ_G0031523.1 mouse_genomes_project 7 76429033 76632611 - MGP_WSBEiJ_P0083101 Sv2b protein_coding protein_coding MGP_WSBEiJ_T0083102.1 MGP_WSBEiJ_G0031523.1 mouse_genomes_project 7 76429036 76631727 - MGP_WSBEiJ_P0083102 Sv2b protein_coding protein_coding MGP_WSBEiJ_T0083103.1 MGP_WSBEiJ_G0031523.1 mouse_genomes_project 7 76430473 76537144 - MGP_WSBEiJ_P0083103 Sv2b protein_coding protein_coding MGP_WSBEiJ_T0083104.1 MGP_WSBEiJ_G0031523.1 mouse_genomes_project 7 76434078 76466335 - MGP_WSBEiJ_P0083104 Sv2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083105.1 MGP_WSBEiJ_G0031523.1 mouse_genomes_project 7 76476368 76481016 - Sv2b protein_coding processed_transcript MGP_WSBEiJ_T0083106.1 MGP_WSBEiJ_G0031523.1 mouse_genomes_project 7 76519758 76631657 - Sv2b protein_coding retained_intron MGP_WSBEiJ_T0082561.1 MGP_WSBEiJ_G0031396.1 mouse_genomes_project 7 46087011 46095278 + MGP_WSBEiJ_P0082561 Fam83e protein_coding protein_coding MGP_WSBEiJ_T0082562.1 MGP_WSBEiJ_G0031396.1 mouse_genomes_project 7 46087019 46090657 + Fam83e protein_coding retained_intron MGP_WSBEiJ_T0082564.1 MGP_WSBEiJ_G0031396.1 mouse_genomes_project 7 46091659 46095275 + Fam83e protein_coding processed_transcript MGP_WSBEiJ_T0081246.1 MGP_WSBEiJ_G0031078.1 mouse_genomes_project 7 26666569 26709842 + MGP_WSBEiJ_P0081246 Fcgbp protein_coding protein_coding MGP_WSBEiJ_T0081247.1 MGP_WSBEiJ_G0031078.1 mouse_genomes_project 7 26666569 26709840 + MGP_WSBEiJ_P0081247 Fcgbp protein_coding protein_coding MGP_WSBEiJ_T0081248.1 MGP_WSBEiJ_G0031078.1 mouse_genomes_project 7 26666911 26680121 + Fcgbp protein_coding retained_intron MGP_WSBEiJ_T0081250.1 MGP_WSBEiJ_G0031078.1 mouse_genomes_project 7 26691679 26709840 + Fcgbp protein_coding retained_intron MGP_WSBEiJ_T0081251.1 MGP_WSBEiJ_G0031078.1 mouse_genomes_project 7 26701946 26709841 + Fcgbp protein_coding retained_intron MGP_WSBEiJ_T0081252.1 MGP_WSBEiJ_G0031078.1 mouse_genomes_project 7 26703753 26709841 + Fcgbp protein_coding processed_transcript MGP_WSBEiJ_T0015364.1 MGP_WSBEiJ_G0013494.1 mouse_genomes_project 7 98373996 98374554 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084417.1 MGP_WSBEiJ_G0031950.1 mouse_genomes_project 7 111245035 111245974 + MGP_WSBEiJ_P0084417 Olfr481 protein_coding protein_coding MGP_WSBEiJ_T0085299.1 MGP_WSBEiJ_G0032147.1 mouse_genomes_project 7 130982025 130999611 + MGP_WSBEiJ_P0085299 Kctd13 protein_coding protein_coding MGP_WSBEiJ_T0085300.1 MGP_WSBEiJ_G0032147.1 mouse_genomes_project 7 130983067 130994502 + Kctd13 protein_coding retained_intron MGP_WSBEiJ_T0085301.1 MGP_WSBEiJ_G0032147.1 mouse_genomes_project 7 130996027 130998947 + Kctd13 protein_coding retained_intron MGP_WSBEiJ_T0083093.1 MGP_WSBEiJ_G0031522.1 mouse_genomes_project 7 75552588 75850546 - MGP_WSBEiJ_P0083093 Slco3a1 protein_coding protein_coding MGP_WSBEiJ_T0083094.1 MGP_WSBEiJ_G0031522.1 mouse_genomes_project 7 75559042 75850527 - MGP_WSBEiJ_P0083094 Slco3a1 protein_coding protein_coding MGP_WSBEiJ_T0083095.1 MGP_WSBEiJ_G0031522.1 mouse_genomes_project 7 75572604 75850693 - MGP_WSBEiJ_P0083095 Slco3a1 protein_coding protein_coding MGP_WSBEiJ_T0083096.1 MGP_WSBEiJ_G0031522.1 mouse_genomes_project 7 75609831 75627219 - Slco3a1 protein_coding retained_intron MGP_WSBEiJ_T0083097.1 MGP_WSBEiJ_G0031522.1 mouse_genomes_project 7 75626773 75850393 - MGP_WSBEiJ_P0083097 Slco3a1 protein_coding protein_coding MGP_WSBEiJ_T0083098.1 MGP_WSBEiJ_G0031522.1 mouse_genomes_project 7 75647001 75797962 - Slco3a1 protein_coding retained_intron MGP_WSBEiJ_T0083099.1 MGP_WSBEiJ_G0031522.1 mouse_genomes_project 7 75797865 75848513 - MGP_WSBEiJ_P0083099 Slco3a1 protein_coding protein_coding MGP_WSBEiJ_T0083100.1 MGP_WSBEiJ_G0031522.1 mouse_genomes_project 7 75798012 75825730 - Slco3a1 protein_coding processed_transcript MGP_WSBEiJ_T0008802.1 MGP_WSBEiJ_G0007110.1 mouse_genomes_project 7 83190710 83196741 + 2900076A07Rik lincRNA lincRNA MGP_WSBEiJ_T0008803.1 MGP_WSBEiJ_G0007110.1 mouse_genomes_project 7 83190723 83197333 + 2900076A07Rik lincRNA lincRNA MGP_WSBEiJ_T0008804.1 MGP_WSBEiJ_G0007110.1 mouse_genomes_project 7 83190731 83198675 + 2900076A07Rik lincRNA lincRNA MGP_WSBEiJ_T0008805.1 MGP_WSBEiJ_G0007110.1 mouse_genomes_project 7 83190731 83196625 + 2900076A07Rik lincRNA lincRNA MGP_WSBEiJ_T0008806.1 MGP_WSBEiJ_G0007110.1 mouse_genomes_project 7 83190766 83196427 + 2900076A07Rik lincRNA lincRNA MGP_WSBEiJ_T0008807.1 MGP_WSBEiJ_G0007110.1 mouse_genomes_project 7 83195585 83196698 + 2900076A07Rik lincRNA lincRNA MGP_WSBEiJ_T0008808.1 MGP_WSBEiJ_G0007110.1 mouse_genomes_project 7 83195962 83196777 + 2900076A07Rik lincRNA lincRNA MGP_WSBEiJ_T0008809.1 MGP_WSBEiJ_G0007110.1 mouse_genomes_project 7 83195977 83198679 + 2900076A07Rik lincRNA lincRNA MGP_WSBEiJ_T0017756.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45922227 45929586 - processed_transcript processed_transcript MGP_WSBEiJ_T0017757.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45922367 45929586 - processed_transcript processed_transcript MGP_WSBEiJ_T0017758.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45922533 45929275 - processed_transcript retained_intron MGP_WSBEiJ_T0017759.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45922556 45929756 - processed_transcript processed_transcript MGP_WSBEiJ_T0017760.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45922652 45929586 - processed_transcript processed_transcript MGP_WSBEiJ_T0017761.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45923534 45929602 - processed_transcript retained_intron MGP_WSBEiJ_T0017762.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45924601 45925492 - processed_transcript processed_transcript MGP_WSBEiJ_T0017763.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45924628 45929623 - processed_transcript processed_transcript MGP_WSBEiJ_T0017764.1 MGP_WSBEiJ_G0015089.1 mouse_genomes_project 7 45928513 45929585 - processed_transcript retained_intron MGP_WSBEiJ_T0005162.1 MGP_WSBEiJ_G0004386.1 mouse_genomes_project 7 82234874 82243233 + Gm15880 antisense antisense MGP_WSBEiJ_T0017745.1 MGP_WSBEiJ_G0015085.1 mouse_genomes_project 7 44469060 44486897 + Gm28496 processed_transcript processed_transcript MGP_WSBEiJ_T0017746.1 MGP_WSBEiJ_G0015085.1 mouse_genomes_project 7 44469108 44486065 + Gm28496 processed_transcript processed_transcript MGP_WSBEiJ_T0083987.1 MGP_WSBEiJ_G0031733.1 mouse_genomes_project 7 104581015 104586284 - MGP_WSBEiJ_P0083987 protein_coding protein_coding MGP_WSBEiJ_T0086108.1 MGP_WSBEiJ_G0032341.1 mouse_genomes_project 7 145735236 145736347 - MGP_WSBEiJ_P0086108 Ifitm2 protein_coding protein_coding MGP_WSBEiJ_T0100983.1 MGP_WSBEiJ_G0039440.1 mouse_genomes_project 7 11587436 11603908 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097100.1 MGP_WSBEiJ_G0035781.1 mouse_genomes_project 7 99337530 99337623 - Gm25712 rRNA rRNA MGP_WSBEiJ_T0082306.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45015245 45044744 + MGP_WSBEiJ_P0082306 Vrk3 protein_coding protein_coding MGP_WSBEiJ_T0082307.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45015317 45025131 + Vrk3 protein_coding retained_intron MGP_WSBEiJ_T0082308.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45015416 45026787 + MGP_WSBEiJ_P0082308 Vrk3 protein_coding protein_coding MGP_WSBEiJ_T0082309.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45015468 45044744 + MGP_WSBEiJ_P0082309 Vrk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082310.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45015478 45030236 + MGP_WSBEiJ_P0082310 Vrk3 protein_coding protein_coding MGP_WSBEiJ_T0082311.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45015479 45031984 + MGP_WSBEiJ_P0082311 Vrk3 protein_coding protein_coding MGP_WSBEiJ_T0082312.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45015775 45020982 + MGP_WSBEiJ_P0082312 Vrk3 protein_coding protein_coding MGP_WSBEiJ_T0082313.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45018934 45026425 + Vrk3 protein_coding processed_transcript MGP_WSBEiJ_T0082314.1 MGP_WSBEiJ_G0031329.1 mouse_genomes_project 7 45018936 45026425 + Vrk3 protein_coding processed_transcript MGP_WSBEiJ_T0083950.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104064556 104132416 + MGP_WSBEiJ_P0083950 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083951.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104064572 104131843 + MGP_WSBEiJ_P0083951 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083952.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104078958 104092182 + MGP_WSBEiJ_P0083952 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083953.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104079173 104092056 + MGP_WSBEiJ_P0083953 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083954.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104079699 104092191 + MGP_WSBEiJ_P0083954 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083955.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104092019 104132410 + MGP_WSBEiJ_P0083955 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083956.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104097232 104132266 + MGP_WSBEiJ_P0083956 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083957.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104097411 104105534 + MGP_WSBEiJ_P0083957 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083958.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104101870 104104637 + Arap1 protein_coding processed_transcript MGP_WSBEiJ_T0083959.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104103063 104105204 + MGP_WSBEiJ_P0083959 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083960.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104104440 104105452 + MGP_WSBEiJ_P0083960 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083961.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104104445 104105844 + MGP_WSBEiJ_P0083961 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083962.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104113349 104133109 + MGP_WSBEiJ_P0083962 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083963.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104113369 104133109 + MGP_WSBEiJ_P0083963 Arap1 protein_coding protein_coding MGP_WSBEiJ_T0083964.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104113636 104115113 + Arap1 protein_coding retained_intron MGP_WSBEiJ_T0083965.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104114830 104117340 + Arap1 protein_coding processed_transcript MGP_WSBEiJ_T0083966.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104117325 104118529 + Arap1 protein_coding processed_transcript MGP_WSBEiJ_T0083967.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104122028 104129569 + Arap1 protein_coding retained_intron MGP_WSBEiJ_T0083968.1 MGP_WSBEiJ_G0031728.1 mouse_genomes_project 7 104128136 104132201 + Arap1 protein_coding retained_intron MGP_WSBEiJ_T0084174.1 MGP_WSBEiJ_G0031828.1 mouse_genomes_project 7 106780633 106781581 + MGP_WSBEiJ_P0084174 protein_coding protein_coding MGP_WSBEiJ_T0084202.1 MGP_WSBEiJ_G0031849.1 mouse_genomes_project 7 107130428 107147888 - protein_coding processed_transcript MGP_WSBEiJ_T0084203.1 MGP_WSBEiJ_G0031849.1 mouse_genomes_project 7 107130431 107163601 - MGP_WSBEiJ_P0084203 protein_coding protein_coding MGP_WSBEiJ_T0084204.1 MGP_WSBEiJ_G0031849.1 mouse_genomes_project 7 107130431 107163602 - MGP_WSBEiJ_P0084204 protein_coding protein_coding MGP_WSBEiJ_T0084215.1 MGP_WSBEiJ_G0031849.1 mouse_genomes_project 7 107150246 107163609 - MGP_WSBEiJ_P0084215 protein_coding protein_coding MGP_WSBEiJ_T0084217.1 MGP_WSBEiJ_G0031849.1 mouse_genomes_project 7 107153693 107163489 - protein_coding processed_transcript MGP_WSBEiJ_T0084218.1 MGP_WSBEiJ_G0031849.1 mouse_genomes_project 7 107157837 107163612 - protein_coding retained_intron MGP_WSBEiJ_T0008713.1 MGP_WSBEiJ_G0007045.1 mouse_genomes_project 7 39899939 39907930 + 4933404I11Rik lincRNA lincRNA MGP_WSBEiJ_T0082594.1 MGP_WSBEiJ_G0031405.1 mouse_genomes_project 7 46262122 46275168 - Syngr4 protein_coding processed_transcript MGP_WSBEiJ_T0082595.1 MGP_WSBEiJ_G0031405.1 mouse_genomes_project 7 46263790 46275281 - MGP_WSBEiJ_P0082595 Syngr4 protein_coding protein_coding MGP_WSBEiJ_T0015276.1 MGP_WSBEiJ_G0013406.1 mouse_genomes_project 7 38714684 38715485 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085323.1 MGP_WSBEiJ_G0032154.1 mouse_genomes_project 7 131070588 131072890 - MGP_WSBEiJ_P0085323 protein_coding protein_coding MGP_WSBEiJ_T0085324.1 MGP_WSBEiJ_G0032154.1 mouse_genomes_project 7 131070602 131075860 - protein_coding retained_intron MGP_WSBEiJ_T0085328.1 MGP_WSBEiJ_G0032154.1 mouse_genomes_project 7 131071768 131076630 - protein_coding processed_transcript MGP_WSBEiJ_T0085329.1 MGP_WSBEiJ_G0032154.1 mouse_genomes_project 7 131071771 131076572 - MGP_WSBEiJ_P0085329 protein_coding protein_coding MGP_WSBEiJ_T0085330.1 MGP_WSBEiJ_G0032154.1 mouse_genomes_project 7 131072308 131076622 - protein_coding processed_transcript MGP_WSBEiJ_T0083646.1 MGP_WSBEiJ_G0031660.1 mouse_genomes_project 7 95243322 95302235 + MGP_WSBEiJ_P0083646 Prcp protein_coding protein_coding MGP_WSBEiJ_T0082470.1 MGP_WSBEiJ_G0031374.1 mouse_genomes_project 7 45771945 45796023 + MGP_WSBEiJ_P0082470 Gys1 protein_coding protein_coding MGP_WSBEiJ_T0082471.1 MGP_WSBEiJ_G0031374.1 mouse_genomes_project 7 45771978 45795234 + MGP_WSBEiJ_P0082471 Gys1 protein_coding protein_coding MGP_WSBEiJ_T0082472.1 MGP_WSBEiJ_G0031374.1 mouse_genomes_project 7 45787353 45791221 + Gys1 protein_coding processed_transcript MGP_WSBEiJ_T0082473.1 MGP_WSBEiJ_G0031374.1 mouse_genomes_project 7 45787479 45791245 + Gys1 protein_coding processed_transcript MGP_WSBEiJ_T0082474.1 MGP_WSBEiJ_G0031374.1 mouse_genomes_project 7 45788002 45794726 + Gys1 protein_coding retained_intron MGP_WSBEiJ_T0082528.1 MGP_WSBEiJ_G0031385.1 mouse_genomes_project 7 45974850 45978243 + MGP_WSBEiJ_P0082528 Fut1 protein_coding protein_coding MGP_WSBEiJ_T0082909.1 MGP_WSBEiJ_G0031486.1 mouse_genomes_project 7 65178695 65195597 + Mtmr10 protein_coding retained_intron MGP_WSBEiJ_T0082910.1 MGP_WSBEiJ_G0031486.1 mouse_genomes_project 7 65178712 65233933 + MGP_WSBEiJ_P0082910 Mtmr10 protein_coding protein_coding MGP_WSBEiJ_T0082911.1 MGP_WSBEiJ_G0031486.1 mouse_genomes_project 7 65178824 65231156 + MGP_WSBEiJ_P0082911 Mtmr10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082912.1 MGP_WSBEiJ_G0031486.1 mouse_genomes_project 7 65193056 65213409 + MGP_WSBEiJ_P0082912 Mtmr10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002246.1 MGP_WSBEiJ_G0002164.1 mouse_genomes_project 7 120976391 120978291 + TEC TEC MGP_WSBEiJ_T0005071.1 MGP_WSBEiJ_G0004320.1 mouse_genomes_project 7 14248061 14270910 + Gm29443 antisense antisense MGP_WSBEiJ_T0005072.1 MGP_WSBEiJ_G0004320.1 mouse_genomes_project 7 14248277 14271009 + Gm29443 antisense antisense MGP_WSBEiJ_T0082505.1 MGP_WSBEiJ_G0031381.1 mouse_genomes_project 7 45871379 45902047 + MGP_WSBEiJ_P0082505 Plekha4 protein_coding protein_coding MGP_WSBEiJ_T0082506.1 MGP_WSBEiJ_G0031381.1 mouse_genomes_project 7 45871379 45906687 + MGP_WSBEiJ_P0082506 Plekha4 protein_coding protein_coding MGP_WSBEiJ_T0082507.1 MGP_WSBEiJ_G0031381.1 mouse_genomes_project 7 45874686 45906687 + MGP_WSBEiJ_P0082507 Plekha4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082508.1 MGP_WSBEiJ_G0031381.1 mouse_genomes_project 7 45874733 45877207 + MGP_WSBEiJ_P0082508 Plekha4 protein_coding protein_coding MGP_WSBEiJ_T0082509.1 MGP_WSBEiJ_G0031381.1 mouse_genomes_project 7 45874798 45906687 + MGP_WSBEiJ_P0082509 Plekha4 protein_coding protein_coding MGP_WSBEiJ_T0082510.1 MGP_WSBEiJ_G0031381.1 mouse_genomes_project 7 45875269 45906490 + MGP_WSBEiJ_P0082510 Plekha4 protein_coding protein_coding MGP_WSBEiJ_T0082511.1 MGP_WSBEiJ_G0031381.1 mouse_genomes_project 7 45902312 45906687 + Plekha4 protein_coding processed_transcript MGP_WSBEiJ_T0082512.1 MGP_WSBEiJ_G0031381.1 mouse_genomes_project 7 45905147 45906687 + Plekha4 protein_coding retained_intron MGP_WSBEiJ_T0082838.1 MGP_WSBEiJ_G0031469.1 mouse_genomes_project 7 57591610 58253643 - MGP_WSBEiJ_P0082838 Gabrg3 protein_coding protein_coding MGP_WSBEiJ_T0082839.1 MGP_WSBEiJ_G0031469.1 mouse_genomes_project 7 58047270 58253326 - MGP_WSBEiJ_P0082839 Gabrg3 protein_coding protein_coding MGP_WSBEiJ_T0082840.1 MGP_WSBEiJ_G0031469.1 mouse_genomes_project 7 58195085 58253643 - Gabrg3 protein_coding retained_intron MGP_WSBEiJ_T0082502.1 MGP_WSBEiJ_G0031380.1 mouse_genomes_project 7 45868197 45869050 - Ppp1r15a protein_coding processed_transcript MGP_WSBEiJ_T0082503.1 MGP_WSBEiJ_G0031380.1 mouse_genomes_project 7 45868198 45871318 - MGP_WSBEiJ_P0082503 Ppp1r15a protein_coding protein_coding MGP_WSBEiJ_T0082504.1 MGP_WSBEiJ_G0031380.1 mouse_genomes_project 7 45868203 45871196 - Ppp1r15a protein_coding retained_intron MGP_WSBEiJ_T0080867.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22696847 22727704 + MGP_WSBEiJ_P0080867 Xrcc1 protein_coding protein_coding MGP_WSBEiJ_T0080868.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22697708 22727707 + MGP_WSBEiJ_P0080868 Xrcc1 protein_coding protein_coding MGP_WSBEiJ_T0080869.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22697756 22714123 + Xrcc1 protein_coding retained_intron MGP_WSBEiJ_T0080870.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22697759 22703195 + Xrcc1 protein_coding processed_transcript MGP_WSBEiJ_T0080871.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22697839 22699117 + Xrcc1 protein_coding retained_intron MGP_WSBEiJ_T0080872.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22697887 22721207 + Xrcc1 protein_coding retained_intron MGP_WSBEiJ_T0080873.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22719836 22721808 + Xrcc1 protein_coding retained_intron MGP_WSBEiJ_T0080874.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22721629 22724961 + Xrcc1 protein_coding retained_intron MGP_WSBEiJ_T0080875.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22723969 22724979 + Xrcc1 protein_coding retained_intron MGP_WSBEiJ_T0080876.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22724124 22725195 + Xrcc1 protein_coding retained_intron MGP_WSBEiJ_T0080877.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22724798 22727709 + Xrcc1 protein_coding processed_transcript MGP_WSBEiJ_T0080878.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22725982 22727703 + Xrcc1 protein_coding retained_intron MGP_WSBEiJ_T0080879.1 MGP_WSBEiJ_G0030983.1 mouse_genomes_project 7 22726494 22727703 + Xrcc1 protein_coding processed_transcript MGP_WSBEiJ_T0080802.1 MGP_WSBEiJ_G0030965.1 mouse_genomes_project 7 22238568 22243010 + Zfp235 protein_coding retained_intron MGP_WSBEiJ_T0080803.1 MGP_WSBEiJ_G0030965.1 mouse_genomes_project 7 22238573 22243817 + Zfp235 protein_coding processed_transcript MGP_WSBEiJ_T0080804.1 MGP_WSBEiJ_G0030965.1 mouse_genomes_project 7 22238595 22247851 + MGP_WSBEiJ_P0080804 Zfp235 protein_coding protein_coding MGP_WSBEiJ_T0080805.1 MGP_WSBEiJ_G0030965.1 mouse_genomes_project 7 22238606 22242380 + Zfp235 protein_coding retained_intron MGP_WSBEiJ_T0080806.1 MGP_WSBEiJ_G0030965.1 mouse_genomes_project 7 22238627 22243821 + Zfp235 protein_coding processed_transcript MGP_WSBEiJ_T0080807.1 MGP_WSBEiJ_G0030965.1 mouse_genomes_project 7 22238641 22251732 + MGP_WSBEiJ_P0080807 Zfp235 protein_coding protein_coding MGP_WSBEiJ_T0081859.1 MGP_WSBEiJ_G0031219.1 mouse_genomes_project 7 33269895 33372945 + MGP_WSBEiJ_P0081859 protein_coding protein_coding MGP_WSBEiJ_T0008695.1 MGP_WSBEiJ_G0007033.1 mouse_genomes_project 7 35522162 35525220 + Gm45143 lincRNA lincRNA MGP_WSBEiJ_T0098487.1 MGP_WSBEiJ_G0037150.1 mouse_genomes_project 7 70567239 70567346 - Gm23815 snRNA snRNA MGP_WSBEiJ_T0080565.1 MGP_WSBEiJ_G0030892.1 mouse_genomes_project 7 16752842 16774176 + Pglyrp1 protein_coding processed_transcript MGP_WSBEiJ_T0080566.1 MGP_WSBEiJ_G0030892.1 mouse_genomes_project 7 16766690 16774158 + MGP_WSBEiJ_P0080566 Pglyrp1 protein_coding protein_coding MGP_WSBEiJ_T0080567.1 MGP_WSBEiJ_G0030892.1 mouse_genomes_project 7 16766703 16767707 + Pglyrp1 protein_coding retained_intron MGP_WSBEiJ_T0002221.1 MGP_WSBEiJ_G0002139.1 mouse_genomes_project 7 77407099 77409752 + TEC TEC MGP_WSBEiJ_T0080264.1 MGP_WSBEiJ_G0030790.1 mouse_genomes_project 7 9104644 9105559 + MGP_WSBEiJ_P0080264 Vmn1r74 protein_coding protein_coding MGP_WSBEiJ_T0086282.1 MGP_WSBEiJ_G0032373.1 mouse_genomes_project 7 146331852 146348262 + MGP_WSBEiJ_P0086282 Tspan4 protein_coding protein_coding MGP_WSBEiJ_T0086283.1 MGP_WSBEiJ_G0032373.1 mouse_genomes_project 7 146331855 146348275 + MGP_WSBEiJ_P0086283 Tspan4 protein_coding protein_coding MGP_WSBEiJ_T0086284.1 MGP_WSBEiJ_G0032373.1 mouse_genomes_project 7 146332078 146346067 + MGP_WSBEiJ_P0086284 Tspan4 protein_coding protein_coding MGP_WSBEiJ_T0086285.1 MGP_WSBEiJ_G0032373.1 mouse_genomes_project 7 146338647 146349414 + MGP_WSBEiJ_P0086285 Tspan4 protein_coding protein_coding MGP_WSBEiJ_T0086286.1 MGP_WSBEiJ_G0032373.1 mouse_genomes_project 7 146347947 146349421 + Tspan4 protein_coding retained_intron MGP_WSBEiJ_T0005200.1 MGP_WSBEiJ_G0004411.1 mouse_genomes_project 7 125122433 125211180 - Gm45077 antisense antisense MGP_WSBEiJ_T0100973.1 MGP_WSBEiJ_G0039430.1 mouse_genomes_project 7 9273754 9274999 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002173.1 MGP_WSBEiJ_G0002092.1 mouse_genomes_project 7 39155722 39158093 - TEC TEC MGP_WSBEiJ_T0010726.1 MGP_WSBEiJ_G0008883.1 mouse_genomes_project 7 98764987 98765086 + Mir6394 miRNA miRNA MGP_WSBEiJ_T0010667.1 MGP_WSBEiJ_G0008824.1 mouse_genomes_project 7 23343891 23344001 - Mir6537 miRNA miRNA MGP_WSBEiJ_T0097094.1 MGP_WSBEiJ_G0035775.1 mouse_genomes_project 7 28438402 28438518 - n-R5s153 rRNA rRNA MGP_WSBEiJ_T0080889.1 MGP_WSBEiJ_G0030990.1 mouse_genomes_project 7 22898998 22914478 - MGP_WSBEiJ_P0080889 Gm4763 protein_coding protein_coding MGP_WSBEiJ_T0080890.1 MGP_WSBEiJ_G0030990.1 mouse_genomes_project 7 22906916 22908709 - MGP_WSBEiJ_P0080890 Gm4763 protein_coding protein_coding MGP_WSBEiJ_T0080891.1 MGP_WSBEiJ_G0030990.1 mouse_genomes_project 7 22907329 22908970 - Gm4763 protein_coding processed_transcript MGP_WSBEiJ_T0008729.1 MGP_WSBEiJ_G0007057.1 mouse_genomes_project 7 52572601 52594523 - Gm29296 lincRNA lincRNA MGP_WSBEiJ_T0086560.1 MGP_WSBEiJ_G0032429.1 mouse_genomes_project 7 150356112 150392057 - MGP_WSBEiJ_P0086560 Tpcn2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081502.1 MGP_WSBEiJ_G0031141.1 mouse_genomes_project 7 28745335 28747707 + MGP_WSBEiJ_P0081502 protein_coding protein_coding MGP_WSBEiJ_T0085903.1 MGP_WSBEiJ_G0032270.1 mouse_genomes_project 7 139874532 139878400 + MGP_WSBEiJ_P0085903 protein_coding protein_coding MGP_WSBEiJ_T0015361.1 MGP_WSBEiJ_G0013491.1 mouse_genomes_project 7 97895405 97896850 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086115.1 MGP_WSBEiJ_G0032346.1 mouse_genomes_project 7 145885527 145897555 + MGP_WSBEiJ_P0086115 B4galnt4 protein_coding protein_coding MGP_WSBEiJ_T0082152.1 MGP_WSBEiJ_G0031285.1 mouse_genomes_project 7 43827897 43837273 - MGP_WSBEiJ_P0082152 Siglece protein_coding protein_coding MGP_WSBEiJ_T0082153.1 MGP_WSBEiJ_G0031285.1 mouse_genomes_project 7 43828368 43836468 - MGP_WSBEiJ_P0082153 Siglece protein_coding protein_coding MGP_WSBEiJ_T0015396.1 MGP_WSBEiJ_G0013526.1 mouse_genomes_project 7 125031715 125032457 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083446.1 MGP_WSBEiJ_G0031587.1 mouse_genomes_project 7 83556444 83576031 + MGP_WSBEiJ_P0083446 Tm6sf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083447.1 MGP_WSBEiJ_G0031587.1 mouse_genomes_project 7 83556670 83581747 + MGP_WSBEiJ_P0083447 Tm6sf1 protein_coding protein_coding MGP_WSBEiJ_T0083448.1 MGP_WSBEiJ_G0031587.1 mouse_genomes_project 7 83556689 83571549 + Tm6sf1 protein_coding retained_intron MGP_WSBEiJ_T0083449.1 MGP_WSBEiJ_G0031587.1 mouse_genomes_project 7 83556787 83563070 + Tm6sf1 protein_coding processed_transcript MGP_WSBEiJ_T0083450.1 MGP_WSBEiJ_G0031587.1 mouse_genomes_project 7 83556820 83582110 + MGP_WSBEiJ_P0083450 Tm6sf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083451.1 MGP_WSBEiJ_G0031587.1 mouse_genomes_project 7 83560358 83581091 + MGP_WSBEiJ_P0083451 Tm6sf1 protein_coding protein_coding MGP_WSBEiJ_T0083452.1 MGP_WSBEiJ_G0031587.1 mouse_genomes_project 7 83567404 83570087 + Tm6sf1 protein_coding retained_intron MGP_WSBEiJ_T0083453.1 MGP_WSBEiJ_G0031587.1 mouse_genomes_project 7 83571164 83581079 + Tm6sf1 protein_coding retained_intron MGP_WSBEiJ_T0005110.1 MGP_WSBEiJ_G0004348.1 mouse_genomes_project 7 29744211 29744812 + Gm29439 antisense antisense MGP_WSBEiJ_T0085508.1 MGP_WSBEiJ_G0032192.1 mouse_genomes_project 7 131898484 131923262 + MGP_WSBEiJ_P0085508 Setd1a protein_coding protein_coding MGP_WSBEiJ_T0085509.1 MGP_WSBEiJ_G0032192.1 mouse_genomes_project 7 131898963 131906639 + MGP_WSBEiJ_P0085509 Setd1a protein_coding protein_coding MGP_WSBEiJ_T0085510.1 MGP_WSBEiJ_G0032192.1 mouse_genomes_project 7 131899203 131906266 + MGP_WSBEiJ_P0085510 Setd1a protein_coding protein_coding MGP_WSBEiJ_T0085511.1 MGP_WSBEiJ_G0032192.1 mouse_genomes_project 7 131899203 131923255 + MGP_WSBEiJ_P0085511 Setd1a protein_coding protein_coding MGP_WSBEiJ_T0085512.1 MGP_WSBEiJ_G0032192.1 mouse_genomes_project 7 131899509 131900380 + MGP_WSBEiJ_P0085512 Setd1a protein_coding protein_coding MGP_WSBEiJ_T0085513.1 MGP_WSBEiJ_G0032192.1 mouse_genomes_project 7 131900391 131903718 + Setd1a protein_coding processed_transcript MGP_WSBEiJ_T0101015.1 MGP_WSBEiJ_G0039472.1 mouse_genomes_project 7 30333104 30334368 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082061.1 MGP_WSBEiJ_G0031257.1 mouse_genomes_project 7 41141310 41192007 - MGP_WSBEiJ_P0082061 Vmn2r57 protein_coding protein_coding MGP_WSBEiJ_T0083666.1 MGP_WSBEiJ_G0031664.1 mouse_genomes_project 7 99764623 99787408 - MGP_WSBEiJ_P0083666 Usp35 protein_coding protein_coding MGP_WSBEiJ_T0083667.1 MGP_WSBEiJ_G0031664.1 mouse_genomes_project 7 99764623 99781351 - MGP_WSBEiJ_P0083667 Usp35 protein_coding protein_coding MGP_WSBEiJ_T0083668.1 MGP_WSBEiJ_G0031664.1 mouse_genomes_project 7 99764649 99771237 - Usp35 protein_coding processed_transcript MGP_WSBEiJ_T0083669.1 MGP_WSBEiJ_G0031664.1 mouse_genomes_project 7 99767716 99770268 - Usp35 protein_coding retained_intron MGP_WSBEiJ_T0083670.1 MGP_WSBEiJ_G0031664.1 mouse_genomes_project 7 99767831 99771238 - Usp35 protein_coding processed_transcript MGP_WSBEiJ_T0083671.1 MGP_WSBEiJ_G0031664.1 mouse_genomes_project 7 99774431 99779780 - Usp35 protein_coding retained_intron MGP_WSBEiJ_T0008867.1 MGP_WSBEiJ_G0007148.1 mouse_genomes_project 7 129343186 129345345 + 4930571K23Rik lincRNA lincRNA MGP_WSBEiJ_T0008868.1 MGP_WSBEiJ_G0007148.1 mouse_genomes_project 7 129343337 129345339 + 4930571K23Rik lincRNA lincRNA MGP_WSBEiJ_T0082532.1 MGP_WSBEiJ_G0031388.1 mouse_genomes_project 7 45999357 46005160 + Mamstr protein_coding retained_intron MGP_WSBEiJ_T0082533.1 MGP_WSBEiJ_G0031388.1 mouse_genomes_project 7 45999357 46000376 + Mamstr protein_coding retained_intron MGP_WSBEiJ_T0082534.1 MGP_WSBEiJ_G0031388.1 mouse_genomes_project 7 45999373 46004597 + MGP_WSBEiJ_P0082534 Mamstr protein_coding protein_coding MGP_WSBEiJ_T0082535.1 MGP_WSBEiJ_G0031388.1 mouse_genomes_project 7 46000865 46005912 + Mamstr protein_coding retained_intron MGP_WSBEiJ_T0082536.1 MGP_WSBEiJ_G0031388.1 mouse_genomes_project 7 46001161 46005132 + Mamstr protein_coding retained_intron MGP_WSBEiJ_T0082537.1 MGP_WSBEiJ_G0031388.1 mouse_genomes_project 7 46003769 46004395 + MGP_WSBEiJ_P0082537 Mamstr protein_coding protein_coding MGP_WSBEiJ_T0082884.1 MGP_WSBEiJ_G0031484.1 mouse_genomes_project 7 64788056 64793761 + MGP_WSBEiJ_P0082884 E030018B13Rik protein_coding protein_coding MGP_WSBEiJ_T0098498.1 MGP_WSBEiJ_G0037161.1 mouse_genomes_project 7 99395785 99395894 - Gm22226 snRNA snRNA MGP_WSBEiJ_T0084255.1 MGP_WSBEiJ_G0031881.1 mouse_genomes_project 7 107983816 107986089 - MGP_WSBEiJ_P0084255 protein_coding protein_coding MGP_WSBEiJ_T0085595.1 MGP_WSBEiJ_G0032208.1 mouse_genomes_project 7 132141048 132148133 + MGP_WSBEiJ_P0085595 Trim72 protein_coding protein_coding MGP_WSBEiJ_T0085596.1 MGP_WSBEiJ_G0032208.1 mouse_genomes_project 7 132141477 132147776 + MGP_WSBEiJ_P0085596 Trim72 protein_coding protein_coding MGP_WSBEiJ_T0005177.1 MGP_WSBEiJ_G0004396.1 mouse_genomes_project 7 99284501 99289540 - Gm15416 antisense antisense MGP_WSBEiJ_T0084259.1 MGP_WSBEiJ_G0031885.1 mouse_genomes_project 7 108152895 108183502 + MGP_WSBEiJ_P0084259 protein_coding protein_coding MGP_WSBEiJ_T0083916.1 MGP_WSBEiJ_G0031722.1 mouse_genomes_project 7 103544016 103606041 - MGP_WSBEiJ_P0083916 Arhgef17 protein_coding protein_coding MGP_WSBEiJ_T0083917.1 MGP_WSBEiJ_G0031722.1 mouse_genomes_project 7 103544046 103568811 - MGP_WSBEiJ_P0083917 Arhgef17 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084189.1 MGP_WSBEiJ_G0031843.1 mouse_genomes_project 7 107012484 107015141 - MGP_WSBEiJ_P0084189 Ubqln3 protein_coding protein_coding MGP_WSBEiJ_T0015392.1 MGP_WSBEiJ_G0013522.1 mouse_genomes_project 7 116764366 116764768 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084134.1 MGP_WSBEiJ_G0031789.1 mouse_genomes_project 7 105950948 105951893 - MGP_WSBEiJ_P0084134 Olfr591 protein_coding protein_coding MGP_WSBEiJ_T0015316.1 MGP_WSBEiJ_G0013446.1 mouse_genomes_project 7 57622625 57623637 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080652.1 MGP_WSBEiJ_G0030915.1 mouse_genomes_project 7 17213654 17228942 + MGP_WSBEiJ_P0080652 Rtn2 protein_coding protein_coding MGP_WSBEiJ_T0080653.1 MGP_WSBEiJ_G0030915.1 mouse_genomes_project 7 17222273 17228937 + MGP_WSBEiJ_P0080653 Rtn2 protein_coding protein_coding MGP_WSBEiJ_T0081349.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27500697 27514392 + MGP_WSBEiJ_P0081349 Hnrnpl protein_coding protein_coding MGP_WSBEiJ_T0081350.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27500962 27509168 + Hnrnpl protein_coding retained_intron MGP_WSBEiJ_T0081351.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27500964 27514375 + MGP_WSBEiJ_P0081351 Hnrnpl protein_coding protein_coding MGP_WSBEiJ_T0081352.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27501674 27507334 + MGP_WSBEiJ_P0081352 Hnrnpl protein_coding protein_coding MGP_WSBEiJ_T0081353.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27503060 27514392 + MGP_WSBEiJ_P0081353 Hnrnpl protein_coding protein_coding MGP_WSBEiJ_T0081354.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27503158 27514366 + MGP_WSBEiJ_P0081354 Hnrnpl protein_coding protein_coding MGP_WSBEiJ_T0081355.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27503161 27509144 + Hnrnpl protein_coding retained_intron MGP_WSBEiJ_T0081356.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27505566 27514375 + MGP_WSBEiJ_P0081356 Hnrnpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081357.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27505599 27506669 + Hnrnpl protein_coding retained_intron MGP_WSBEiJ_T0081358.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27507045 27510908 + Hnrnpl protein_coding retained_intron MGP_WSBEiJ_T0081359.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27507314 27512843 + Hnrnpl protein_coding retained_intron MGP_WSBEiJ_T0081360.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27510041 27510920 + Hnrnpl protein_coding retained_intron MGP_WSBEiJ_T0081361.1 MGP_WSBEiJ_G0031110.1 mouse_genomes_project 7 27513332 27514370 + Hnrnpl protein_coding retained_intron MGP_WSBEiJ_T0017765.1 MGP_WSBEiJ_G0015090.1 mouse_genomes_project 7 49569746 49577748 + processed_transcript processed_transcript MGP_WSBEiJ_T0017766.1 MGP_WSBEiJ_G0015090.1 mouse_genomes_project 7 49573103 49578394 + processed_transcript processed_transcript MGP_WSBEiJ_T0086446.1 MGP_WSBEiJ_G0032402.1 mouse_genomes_project 7 148065483 148070892 - MGP_WSBEiJ_P0086446 Trpm5 protein_coding protein_coding MGP_WSBEiJ_T0086453.1 MGP_WSBEiJ_G0032402.1 mouse_genomes_project 7 148067421 148070368 - MGP_WSBEiJ_P0086453 Trpm5 protein_coding protein_coding MGP_WSBEiJ_T0086454.1 MGP_WSBEiJ_G0032402.1 mouse_genomes_project 7 148067547 148071184 - Trpm5 protein_coding retained_intron MGP_WSBEiJ_T0086455.1 MGP_WSBEiJ_G0032402.1 mouse_genomes_project 7 148067859 148083545 - Trpm5 protein_coding retained_intron MGP_WSBEiJ_T0086456.1 MGP_WSBEiJ_G0032402.1 mouse_genomes_project 7 148068119 148090975 - MGP_WSBEiJ_P0086456 Trpm5 protein_coding protein_coding MGP_WSBEiJ_T0086457.1 MGP_WSBEiJ_G0032402.1 mouse_genomes_project 7 148068508 148083460 - Trpm5 protein_coding retained_intron MGP_WSBEiJ_T0086458.1 MGP_WSBEiJ_G0032402.1 mouse_genomes_project 7 148068672 148090939 - MGP_WSBEiJ_P0086458 Trpm5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086459.1 MGP_WSBEiJ_G0032402.1 mouse_genomes_project 7 148077046 148078253 - Trpm5 protein_coding retained_intron MGP_WSBEiJ_T0015300.1 MGP_WSBEiJ_G0013430.1 mouse_genomes_project 7 43678170 43678722 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081753.1 MGP_WSBEiJ_G0031197.1 mouse_genomes_project 7 29772229 29788521 - MGP_WSBEiJ_P0081753 Mag protein_coding protein_coding MGP_WSBEiJ_T0081754.1 MGP_WSBEiJ_G0031197.1 mouse_genomes_project 7 29772236 29788005 - MGP_WSBEiJ_P0081754 Mag protein_coding protein_coding MGP_WSBEiJ_T0081755.1 MGP_WSBEiJ_G0031197.1 mouse_genomes_project 7 29772584 29787986 - MGP_WSBEiJ_P0081755 Mag protein_coding protein_coding MGP_WSBEiJ_T0081756.1 MGP_WSBEiJ_G0031197.1 mouse_genomes_project 7 29772639 29787986 - MGP_WSBEiJ_P0081756 Mag protein_coding protein_coding MGP_WSBEiJ_T0081757.1 MGP_WSBEiJ_G0031197.1 mouse_genomes_project 7 29780029 29788562 - Mag protein_coding retained_intron MGP_WSBEiJ_T0081758.1 MGP_WSBEiJ_G0031197.1 mouse_genomes_project 7 29782875 29788554 - MGP_WSBEiJ_P0081758 Mag protein_coding protein_coding MGP_WSBEiJ_T0081759.1 MGP_WSBEiJ_G0031197.1 mouse_genomes_project 7 29785293 29788513 - MGP_WSBEiJ_P0081759 Mag protein_coding protein_coding MGP_WSBEiJ_T0081760.1 MGP_WSBEiJ_G0031197.1 mouse_genomes_project 7 29785670 29788534 - Mag protein_coding processed_transcript MGP_WSBEiJ_T0082172.1 MGP_WSBEiJ_G0031295.1 mouse_genomes_project 7 44017110 44024636 + MGP_WSBEiJ_P0082172 Klk6 protein_coding protein_coding MGP_WSBEiJ_T0082173.1 MGP_WSBEiJ_G0031295.1 mouse_genomes_project 7 44017169 44024392 + MGP_WSBEiJ_P0082173 Klk6 protein_coding protein_coding MGP_WSBEiJ_T0082174.1 MGP_WSBEiJ_G0031295.1 mouse_genomes_project 7 44017181 44021171 + MGP_WSBEiJ_P0082174 Klk6 protein_coding protein_coding MGP_WSBEiJ_T0082175.1 MGP_WSBEiJ_G0031295.1 mouse_genomes_project 7 44017979 44024392 + MGP_WSBEiJ_P0082175 Klk6 protein_coding protein_coding MGP_WSBEiJ_T0081600.1 MGP_WSBEiJ_G0031168.1 mouse_genomes_project 7 29268253 29281288 - Kirrel2 protein_coding retained_intron MGP_WSBEiJ_T0081601.1 MGP_WSBEiJ_G0031168.1 mouse_genomes_project 7 29268255 29281151 - MGP_WSBEiJ_P0081601 Kirrel2 protein_coding protein_coding MGP_WSBEiJ_T0081602.1 MGP_WSBEiJ_G0031168.1 mouse_genomes_project 7 29268790 29274706 - MGP_WSBEiJ_P0081602 Kirrel2 protein_coding protein_coding MGP_WSBEiJ_T0081603.1 MGP_WSBEiJ_G0031168.1 mouse_genomes_project 7 29268838 29280485 - MGP_WSBEiJ_P0081603 Kirrel2 protein_coding protein_coding MGP_WSBEiJ_T0081604.1 MGP_WSBEiJ_G0031168.1 mouse_genomes_project 7 29280619 29281326 - Kirrel2 protein_coding processed_transcript MGP_WSBEiJ_T0098489.1 MGP_WSBEiJ_G0037152.1 mouse_genomes_project 7 76992048 76992132 + Gm25282 snRNA snRNA MGP_WSBEiJ_T0099752.1 MGP_WSBEiJ_G0038415.1 mouse_genomes_project 7 128081288 128081417 + Gm25759 snoRNA snoRNA MGP_WSBEiJ_T0082870.1 MGP_WSBEiJ_G0031476.1 mouse_genomes_project 7 60632234 60642211 - MGP_WSBEiJ_P0082870 Gm38393 protein_coding protein_coding MGP_WSBEiJ_T0082358.1 MGP_WSBEiJ_G0031336.1 mouse_genomes_project 7 45157676 45171175 - MGP_WSBEiJ_P0082358 Med25 protein_coding protein_coding MGP_WSBEiJ_T0084131.1 MGP_WSBEiJ_G0031786.1 mouse_genomes_project 7 105890857 105891817 + MGP_WSBEiJ_P0084131 Olfr585 protein_coding protein_coding MGP_WSBEiJ_T0080640.1 MGP_WSBEiJ_G0030911.1 mouse_genomes_project 7 17135278 17146924 + MGP_WSBEiJ_P0080640 Gpr4 protein_coding protein_coding MGP_WSBEiJ_T0084865.1 MGP_WSBEiJ_G0032071.1 mouse_genomes_project 7 124451508 124512052 + MGP_WSBEiJ_P0084865 BC030336 protein_coding protein_coding MGP_WSBEiJ_T0081223.1 MGP_WSBEiJ_G0031068.1 mouse_genomes_project 7 26196146 26199578 + MGP_WSBEiJ_P0081223 Ttc9b protein_coding protein_coding MGP_WSBEiJ_T0100957.1 MGP_WSBEiJ_G0039414.1 mouse_genomes_project 7 1117032 1117869 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005176.1 MGP_WSBEiJ_G0004395.1 mouse_genomes_project 7 99263513 99273631 - Gm15413 antisense antisense MGP_WSBEiJ_T0081561.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129743 29135363 + MGP_WSBEiJ_P0081561 Alkbh6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081562.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129749 29135356 + MGP_WSBEiJ_P0081562 Alkbh6 protein_coding protein_coding MGP_WSBEiJ_T0081563.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129809 29135206 + MGP_WSBEiJ_P0081563 Alkbh6 protein_coding protein_coding MGP_WSBEiJ_T0081564.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129809 29135213 + MGP_WSBEiJ_P0081564 Alkbh6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081565.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129820 29135355 + Alkbh6 protein_coding retained_intron MGP_WSBEiJ_T0081566.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129827 29133550 + Alkbh6 protein_coding retained_intron MGP_WSBEiJ_T0081567.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129841 29133462 + Alkbh6 protein_coding retained_intron MGP_WSBEiJ_T0081568.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129845 29132091 + Alkbh6 protein_coding processed_transcript MGP_WSBEiJ_T0081569.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29129886 29133738 + Alkbh6 protein_coding retained_intron MGP_WSBEiJ_T0081570.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29130810 29133703 + Alkbh6 protein_coding retained_intron MGP_WSBEiJ_T0081571.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29132167 29133405 + Alkbh6 protein_coding retained_intron MGP_WSBEiJ_T0081572.1 MGP_WSBEiJ_G0031159.1 mouse_genomes_project 7 29133716 29135356 + Alkbh6 protein_coding processed_transcript MGP_WSBEiJ_T0080513.1 MGP_WSBEiJ_G0030869.1 mouse_genomes_project 7 14542703 14554893 + MGP_WSBEiJ_P0080513 Dact3 protein_coding protein_coding MGP_WSBEiJ_T0015297.1 MGP_WSBEiJ_G0013427.1 mouse_genomes_project 7 43507098 43507336 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083444.1 MGP_WSBEiJ_G0031585.1 mouse_genomes_project 7 83487132 83523129 - MGP_WSBEiJ_P0083444 Btbd1 protein_coding protein_coding MGP_WSBEiJ_T0084443.1 MGP_WSBEiJ_G0031975.1 mouse_genomes_project 7 112162094 112170632 + MGP_WSBEiJ_P0084443 Eif3f protein_coding protein_coding MGP_WSBEiJ_T0084444.1 MGP_WSBEiJ_G0031975.1 mouse_genomes_project 7 112166074 112168157 + Eif3f protein_coding retained_intron MGP_WSBEiJ_T0084445.1 MGP_WSBEiJ_G0031975.1 mouse_genomes_project 7 112167988 112168689 + Eif3f protein_coding retained_intron MGP_WSBEiJ_T0080232.1 MGP_WSBEiJ_G0030770.1 mouse_genomes_project 7 3686733 3687787 - MGP_WSBEiJ_P0080232 Olfr1349 protein_coding protein_coding MGP_WSBEiJ_T0002231.1 MGP_WSBEiJ_G0002149.1 mouse_genomes_project 7 80999787 81000826 + TEC TEC MGP_WSBEiJ_T0085411.1 MGP_WSBEiJ_G0032175.1 mouse_genomes_project 7 131516789 131519242 - MGP_WSBEiJ_P0085411 protein_coding protein_coding MGP_WSBEiJ_T0081301.1 MGP_WSBEiJ_G0031095.1 mouse_genomes_project 7 27058080 27080086 + MGP_WSBEiJ_P0081301 Gmfg protein_coding protein_coding MGP_WSBEiJ_T0081302.1 MGP_WSBEiJ_G0031095.1 mouse_genomes_project 7 27074409 27081818 + Gmfg protein_coding processed_transcript MGP_WSBEiJ_T0084943.1 MGP_WSBEiJ_G0032091.1 mouse_genomes_project 7 125967851 125986671 + MGP_WSBEiJ_P0084943 Dctn5 protein_coding protein_coding MGP_WSBEiJ_T0084944.1 MGP_WSBEiJ_G0032091.1 mouse_genomes_project 7 125967864 125986671 + Dctn5 protein_coding retained_intron MGP_WSBEiJ_T0084945.1 MGP_WSBEiJ_G0032091.1 mouse_genomes_project 7 125967882 125969942 + MGP_WSBEiJ_P0084945 Dctn5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084946.1 MGP_WSBEiJ_G0032091.1 mouse_genomes_project 7 125980387 125986208 + MGP_WSBEiJ_P0084946 Dctn5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081524.1 MGP_WSBEiJ_G0031148.1 mouse_genomes_project 7 28926170 28939923 + MGP_WSBEiJ_P0081524 Zfp382 protein_coding protein_coding MGP_WSBEiJ_T0081525.1 MGP_WSBEiJ_G0031148.1 mouse_genomes_project 7 28926198 28936050 + MGP_WSBEiJ_P0081525 Zfp382 protein_coding protein_coding MGP_WSBEiJ_T0081526.1 MGP_WSBEiJ_G0031148.1 mouse_genomes_project 7 28929890 28938803 + Zfp382 protein_coding retained_intron MGP_WSBEiJ_T0081610.1 MGP_WSBEiJ_G0031170.1 mouse_genomes_project 7 29323400 29344752 + MGP_WSBEiJ_P0081610 Prodh2 protein_coding protein_coding MGP_WSBEiJ_T0081611.1 MGP_WSBEiJ_G0031170.1 mouse_genomes_project 7 29323436 29340112 + Prodh2 protein_coding processed_transcript MGP_WSBEiJ_T0081612.1 MGP_WSBEiJ_G0031170.1 mouse_genomes_project 7 29323436 29337898 + MGP_WSBEiJ_P0081612 Prodh2 protein_coding protein_coding MGP_WSBEiJ_T0081613.1 MGP_WSBEiJ_G0031170.1 mouse_genomes_project 7 29323437 29324066 + Prodh2 protein_coding retained_intron MGP_WSBEiJ_T0081614.1 MGP_WSBEiJ_G0031170.1 mouse_genomes_project 7 29323437 29338126 + MGP_WSBEiJ_P0081614 Prodh2 protein_coding protein_coding MGP_WSBEiJ_T0081615.1 MGP_WSBEiJ_G0031170.1 mouse_genomes_project 7 29323459 29337987 + MGP_WSBEiJ_P0081615 Prodh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081616.1 MGP_WSBEiJ_G0031170.1 mouse_genomes_project 7 29323558 29338194 + MGP_WSBEiJ_P0081616 Prodh2 protein_coding protein_coding MGP_WSBEiJ_T0081617.1 MGP_WSBEiJ_G0031170.1 mouse_genomes_project 7 29338225 29344388 + MGP_WSBEiJ_P0081617 Prodh2 protein_coding protein_coding MGP_WSBEiJ_T0080775.1 MGP_WSBEiJ_G0030950.1 mouse_genomes_project 7 17959826 17993896 + MGP_WSBEiJ_P0080775 Ceacam20 protein_coding protein_coding MGP_WSBEiJ_T0084032.1 MGP_WSBEiJ_G0031739.1 mouse_genomes_project 7 104728056 104771656 + MGP_WSBEiJ_P0084032 Numa1 protein_coding protein_coding MGP_WSBEiJ_T0084033.1 MGP_WSBEiJ_G0031739.1 mouse_genomes_project 7 104728346 104770944 + MGP_WSBEiJ_P0084033 Numa1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084034.1 MGP_WSBEiJ_G0031739.1 mouse_genomes_project 7 104758115 104771652 + MGP_WSBEiJ_P0084034 Numa1 protein_coding protein_coding MGP_WSBEiJ_T0081309.1 MGP_WSBEiJ_G0031098.1 mouse_genomes_project 7 27116250 27155824 - MGP_WSBEiJ_P0081309 protein_coding protein_coding MGP_WSBEiJ_T0015270.1 MGP_WSBEiJ_G0013400.1 mouse_genomes_project 7 33311235 33311378 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084504.1 MGP_WSBEiJ_G0031993.1 mouse_genomes_project 7 113359070 113395577 + MGP_WSBEiJ_P0084504 Zfp143 protein_coding protein_coding MGP_WSBEiJ_T0084505.1 MGP_WSBEiJ_G0031993.1 mouse_genomes_project 7 113359078 113395572 + MGP_WSBEiJ_P0084505 Zfp143 protein_coding protein_coding MGP_WSBEiJ_T0017806.1 MGP_WSBEiJ_G0015105.1 mouse_genomes_project 7 112677536 112683792 + 1700095J03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0083696.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024579 100052413 - MGP_WSBEiJ_P0083696 Aamdc protein_coding protein_coding MGP_WSBEiJ_T0083697.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024582 100056243 - MGP_WSBEiJ_P0083697 Aamdc protein_coding protein_coding MGP_WSBEiJ_T0083698.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024588 100056162 - MGP_WSBEiJ_P0083698 Aamdc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083699.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024595 100056250 - Aamdc protein_coding processed_transcript MGP_WSBEiJ_T0083700.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024790 100056205 - MGP_WSBEiJ_P0083700 Aamdc protein_coding protein_coding MGP_WSBEiJ_T0083701.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024796 100056206 - MGP_WSBEiJ_P0083701 Aamdc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083702.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024813 100056238 - MGP_WSBEiJ_P0083702 Aamdc protein_coding protein_coding MGP_WSBEiJ_T0083703.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024849 100056254 - MGP_WSBEiJ_P0083703 Aamdc protein_coding protein_coding MGP_WSBEiJ_T0083704.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024918 100056183 - MGP_WSBEiJ_P0083704 Aamdc protein_coding protein_coding MGP_WSBEiJ_T0083705.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100024963 100056146 - MGP_WSBEiJ_P0083705 Aamdc protein_coding protein_coding MGP_WSBEiJ_T0083706.1 MGP_WSBEiJ_G0031671.1 mouse_genomes_project 7 100052659 100054986 - Aamdc protein_coding retained_intron MGP_WSBEiJ_T0010759.1 MGP_WSBEiJ_G0008916.1 mouse_genomes_project 7 149042898 149042983 + Mir3105 miRNA miRNA MGP_WSBEiJ_T0084508.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113618801 113947807 - MGP_WSBEiJ_P0084508 Sbf2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084509.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113618804 113947968 - MGP_WSBEiJ_P0084509 Sbf2 protein_coding protein_coding MGP_WSBEiJ_T0084510.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113618813 113947966 - MGP_WSBEiJ_P0084510 Sbf2 protein_coding protein_coding MGP_WSBEiJ_T0084511.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113620189 113947807 - MGP_WSBEiJ_P0084511 Sbf2 protein_coding protein_coding MGP_WSBEiJ_T0084512.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113631512 113650932 - Sbf2 protein_coding retained_intron MGP_WSBEiJ_T0084513.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113640711 113674745 - MGP_WSBEiJ_P0084513 Sbf2 protein_coding protein_coding MGP_WSBEiJ_T0084514.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113649830 113662791 - Sbf2 protein_coding retained_intron MGP_WSBEiJ_T0084515.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113651970 113678189 - MGP_WSBEiJ_P0084515 Sbf2 protein_coding protein_coding MGP_WSBEiJ_T0084516.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113691562 113947960 - Sbf2 protein_coding retained_intron MGP_WSBEiJ_T0084517.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113691873 113947942 - Sbf2 protein_coding retained_intron MGP_WSBEiJ_T0084518.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113741075 113765074 - MGP_WSBEiJ_P0084518 Sbf2 protein_coding protein_coding MGP_WSBEiJ_T0084519.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113747737 113947928 - Sbf2 protein_coding retained_intron MGP_WSBEiJ_T0084520.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113764070 113947951 - MGP_WSBEiJ_P0084520 Sbf2 protein_coding protein_coding MGP_WSBEiJ_T0084521.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113764256 113791579 - MGP_WSBEiJ_P0084521 Sbf2 protein_coding protein_coding MGP_WSBEiJ_T0084522.1 MGP_WSBEiJ_G0031996.1 mouse_genomes_project 7 113791522 113947807 - MGP_WSBEiJ_P0084522 Sbf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083828.1 MGP_WSBEiJ_G0031700.1 mouse_genomes_project 7 102361131 102363616 + MGP_WSBEiJ_P0083828 Olfr521 protein_coding protein_coding MGP_WSBEiJ_T0080157.1 MGP_WSBEiJ_G0030735.1 mouse_genomes_project 7 1935427 1948053 - Zfp579 protein_coding processed_transcript MGP_WSBEiJ_T0080158.1 MGP_WSBEiJ_G0030735.1 mouse_genomes_project 7 1944814 1948156 - Zfp579 protein_coding processed_transcript MGP_WSBEiJ_T0080159.1 MGP_WSBEiJ_G0030735.1 mouse_genomes_project 7 1944814 1947303 - MGP_WSBEiJ_P0080159 Zfp579 protein_coding protein_coding MGP_WSBEiJ_T0080160.1 MGP_WSBEiJ_G0030735.1 mouse_genomes_project 7 1944816 1948099 - MGP_WSBEiJ_P0080160 Zfp579 protein_coding protein_coding MGP_WSBEiJ_T0080161.1 MGP_WSBEiJ_G0030735.1 mouse_genomes_project 7 1946163 1948083 - MGP_WSBEiJ_P0080161 Zfp579 protein_coding protein_coding MGP_WSBEiJ_T0080162.1 MGP_WSBEiJ_G0030735.1 mouse_genomes_project 7 1946973 1948027 - Zfp579 protein_coding processed_transcript MGP_WSBEiJ_T0100959.1 MGP_WSBEiJ_G0039416.1 mouse_genomes_project 7 7520992 7521888 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084244.1 MGP_WSBEiJ_G0031870.1 mouse_genomes_project 7 107784325 107785306 - MGP_WSBEiJ_P0084244 Olfr667 protein_coding protein_coding MGP_WSBEiJ_T0083748.1 MGP_WSBEiJ_G0031680.1 mouse_genomes_project 7 100687453 100694528 - MGP_WSBEiJ_P0083748 B3gnt6 protein_coding protein_coding MGP_WSBEiJ_T0080546.1 MGP_WSBEiJ_G0030879.1 mouse_genomes_project 7 14828213 14855878 + MGP_WSBEiJ_P0080546 Ceacam3 protein_coding protein_coding MGP_WSBEiJ_T0099735.1 MGP_WSBEiJ_G0038398.1 mouse_genomes_project 7 102038581 102038726 - Snord15b snoRNA snoRNA MGP_WSBEiJ_T0081699.1 MGP_WSBEiJ_G0031187.1 mouse_genomes_project 7 29558278 29566881 + Atp4a protein_coding retained_intron MGP_WSBEiJ_T0081700.1 MGP_WSBEiJ_G0031187.1 mouse_genomes_project 7 29558278 29572670 + MGP_WSBEiJ_P0081700 Atp4a protein_coding protein_coding MGP_WSBEiJ_T0081701.1 MGP_WSBEiJ_G0031187.1 mouse_genomes_project 7 29558301 29572669 + MGP_WSBEiJ_P0081701 Atp4a protein_coding protein_coding MGP_WSBEiJ_T0081702.1 MGP_WSBEiJ_G0031187.1 mouse_genomes_project 7 29563910 29566630 + MGP_WSBEiJ_P0081702 Atp4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081703.1 MGP_WSBEiJ_G0031187.1 mouse_genomes_project 7 29568403 29572326 + Atp4a protein_coding retained_intron MGP_WSBEiJ_T0084383.1 MGP_WSBEiJ_G0031923.1 mouse_genomes_project 7 109989780 109992573 + MGP_WSBEiJ_P0084383 Olfr1532-ps1 protein_coding protein_coding MGP_WSBEiJ_T0084744.1 MGP_WSBEiJ_G0032039.1 mouse_genomes_project 7 122198167 122251141 - MGP_WSBEiJ_P0084744 Tmc7 protein_coding protein_coding MGP_WSBEiJ_T0084745.1 MGP_WSBEiJ_G0032039.1 mouse_genomes_project 7 122212188 122251091 - Tmc7 protein_coding retained_intron MGP_WSBEiJ_T0084746.1 MGP_WSBEiJ_G0032039.1 mouse_genomes_project 7 122230114 122232499 - Tmc7 protein_coding retained_intron MGP_WSBEiJ_T0084747.1 MGP_WSBEiJ_G0032039.1 mouse_genomes_project 7 122237927 122251114 - Tmc7 protein_coding processed_transcript MGP_WSBEiJ_T0002197.1 MGP_WSBEiJ_G0002116.1 mouse_genomes_project 7 64822895 64824425 + TEC TEC MGP_WSBEiJ_T0086507.1 MGP_WSBEiJ_G0032417.1 mouse_genomes_project 7 148860702 148879920 + MGP_WSBEiJ_P0086507 Dhcr7 protein_coding protein_coding MGP_WSBEiJ_T0086508.1 MGP_WSBEiJ_G0032417.1 mouse_genomes_project 7 148860890 148879915 + MGP_WSBEiJ_P0086508 Dhcr7 protein_coding protein_coding MGP_WSBEiJ_T0086509.1 MGP_WSBEiJ_G0032417.1 mouse_genomes_project 7 148861047 148876385 + MGP_WSBEiJ_P0086509 Dhcr7 protein_coding protein_coding MGP_WSBEiJ_T0086510.1 MGP_WSBEiJ_G0032417.1 mouse_genomes_project 7 148861051 148873966 + MGP_WSBEiJ_P0086510 Dhcr7 protein_coding protein_coding MGP_WSBEiJ_T0086511.1 MGP_WSBEiJ_G0032417.1 mouse_genomes_project 7 148861071 148868702 + Dhcr7 protein_coding processed_transcript MGP_WSBEiJ_T0086512.1 MGP_WSBEiJ_G0032417.1 mouse_genomes_project 7 148871748 148874119 + Dhcr7 protein_coding processed_transcript MGP_WSBEiJ_T0086513.1 MGP_WSBEiJ_G0032417.1 mouse_genomes_project 7 148872153 148878225 + Dhcr7 protein_coding processed_transcript MGP_WSBEiJ_T0008827.1 MGP_WSBEiJ_G0007124.1 mouse_genomes_project 7 101203290 101225206 - Gm15506 lincRNA lincRNA MGP_WSBEiJ_T0005156.1 MGP_WSBEiJ_G0004382.1 mouse_genomes_project 7 81424560 81428265 + Gm26646 antisense antisense MGP_WSBEiJ_T0005157.1 MGP_WSBEiJ_G0004382.1 mouse_genomes_project 7 81426592 81428265 + Gm26646 antisense antisense MGP_WSBEiJ_T0083057.1 MGP_WSBEiJ_G0031514.1 mouse_genomes_project 7 69777509 69789698 - MGP_WSBEiJ_P0083057 Arrdc4 protein_coding protein_coding MGP_WSBEiJ_T0083058.1 MGP_WSBEiJ_G0031514.1 mouse_genomes_project 7 69781966 69785362 - Arrdc4 protein_coding retained_intron MGP_WSBEiJ_T0083059.1 MGP_WSBEiJ_G0031514.1 mouse_genomes_project 7 69782058 69789645 - MGP_WSBEiJ_P0083059 Arrdc4 protein_coding protein_coding MGP_WSBEiJ_T0080123.1 MGP_WSBEiJ_G0030721.1 mouse_genomes_project 7 1685613 1706580 - MGP_WSBEiJ_P0080123 Fam71e2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080124.1 MGP_WSBEiJ_G0030721.1 mouse_genomes_project 7 1685616 1706580 - MGP_WSBEiJ_P0080124 Fam71e2 protein_coding protein_coding MGP_WSBEiJ_T0083007.1 MGP_WSBEiJ_G0031505.1 mouse_genomes_project 7 67699269 67784778 + MGP_WSBEiJ_P0083007 Cers3 protein_coding protein_coding MGP_WSBEiJ_T0082267.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44772493 44789273 - MGP_WSBEiJ_P0082267 Pold1 protein_coding protein_coding MGP_WSBEiJ_T0082268.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44772496 44773666 - Pold1 protein_coding retained_intron MGP_WSBEiJ_T0082269.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44772498 44789275 - Pold1 protein_coding retained_intron MGP_WSBEiJ_T0082270.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44772501 44774839 - Pold1 protein_coding retained_intron MGP_WSBEiJ_T0082271.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44772533 44789264 - MGP_WSBEiJ_P0082271 Pold1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082272.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44773027 44773937 - Pold1 protein_coding retained_intron MGP_WSBEiJ_T0082273.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44773643 44775706 - Pold1 protein_coding retained_intron MGP_WSBEiJ_T0082274.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44777266 44778165 - Pold1 protein_coding retained_intron MGP_WSBEiJ_T0082275.1 MGP_WSBEiJ_G0031320.1 mouse_genomes_project 7 44781848 44789159 - MGP_WSBEiJ_P0082275 Pold1 protein_coding protein_coding MGP_WSBEiJ_T0085404.1 MGP_WSBEiJ_G0032171.1 mouse_genomes_project 7 131439114 131441743 - MGP_WSBEiJ_P0085404 Zfp768 protein_coding protein_coding MGP_WSBEiJ_T0085405.1 MGP_WSBEiJ_G0032171.1 mouse_genomes_project 7 131439114 131441909 - MGP_WSBEiJ_P0085405 Zfp768 protein_coding protein_coding MGP_WSBEiJ_T0079944.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 552582 569820 - MGP_WSBEiJ_P0079944 Mboat7 protein_coding protein_coding MGP_WSBEiJ_T0079945.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 552586 568411 - MGP_WSBEiJ_P0079945 Mboat7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079946.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 553195 568160 - MGP_WSBEiJ_P0079946 Mboat7 protein_coding protein_coding MGP_WSBEiJ_T0079947.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 553568 559169 - Mboat7 protein_coding retained_intron MGP_WSBEiJ_T0079948.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 557998 569249 - Mboat7 protein_coding retained_intron MGP_WSBEiJ_T0079949.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 560244 570450 - MGP_WSBEiJ_P0079949 Mboat7 protein_coding protein_coding MGP_WSBEiJ_T0079950.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 560599 569185 - MGP_WSBEiJ_P0079950 Mboat7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079951.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 560615 569185 - MGP_WSBEiJ_P0079951 Mboat7 protein_coding protein_coding MGP_WSBEiJ_T0079952.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 564717 569059 - MGP_WSBEiJ_P0079952 Mboat7 protein_coding protein_coding MGP_WSBEiJ_T0079953.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 565146 569259 - Mboat7 protein_coding retained_intron MGP_WSBEiJ_T0079954.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 565444 569077 - Mboat7 protein_coding retained_intron MGP_WSBEiJ_T0079955.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 565972 569235 - Mboat7 protein_coding retained_intron MGP_WSBEiJ_T0079956.1 MGP_WSBEiJ_G0030694.1 mouse_genomes_project 7 567993 568951 - Mboat7 protein_coding retained_intron MGP_WSBEiJ_T0099704.1 MGP_WSBEiJ_G0038367.1 mouse_genomes_project 7 34562462 34562588 + Gm24505 snoRNA snoRNA MGP_WSBEiJ_T0010732.1 MGP_WSBEiJ_G0008889.1 mouse_genomes_project 7 114139241 114139348 + miRNA miRNA MGP_WSBEiJ_T0015404.1 MGP_WSBEiJ_G0013534.1 mouse_genomes_project 7 130168407 130168818 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002256.1 MGP_WSBEiJ_G0002174.1 mouse_genomes_project 7 126451679 126453026 + TEC TEC MGP_WSBEiJ_T0008900.1 MGP_WSBEiJ_G0007170.1 mouse_genomes_project 7 137272154 137314671 - 1500002F19Rik lincRNA lincRNA MGP_WSBEiJ_T0084828.1 MGP_WSBEiJ_G0032059.1 mouse_genomes_project 7 123577052 123621729 - MGP_WSBEiJ_P0084828 Dcun1d3 protein_coding protein_coding MGP_WSBEiJ_T0084829.1 MGP_WSBEiJ_G0032059.1 mouse_genomes_project 7 123579703 123621527 - MGP_WSBEiJ_P0084829 Dcun1d3 protein_coding protein_coding MGP_WSBEiJ_T0084830.1 MGP_WSBEiJ_G0032059.1 mouse_genomes_project 7 123581215 123622276 - MGP_WSBEiJ_P0084830 Dcun1d3 protein_coding protein_coding MGP_WSBEiJ_T0084831.1 MGP_WSBEiJ_G0032059.1 mouse_genomes_project 7 123581884 123585733 - MGP_WSBEiJ_P0084831 Dcun1d3 protein_coding protein_coding MGP_WSBEiJ_T0084832.1 MGP_WSBEiJ_G0032059.1 mouse_genomes_project 7 123583521 123585705 - MGP_WSBEiJ_P0084832 Dcun1d3 protein_coding protein_coding MGP_WSBEiJ_T0082563.1 MGP_WSBEiJ_G0031397.1 mouse_genomes_project 7 46090907 46091614 - MGP_WSBEiJ_P0082563 Spaca4 protein_coding protein_coding MGP_WSBEiJ_T0101037.1 MGP_WSBEiJ_G0039494.1 mouse_genomes_project 7 44183416 44236905 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083858.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103016495 103115327 + MGP_WSBEiJ_P0083858 C2cd3 protein_coding protein_coding MGP_WSBEiJ_T0083859.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103016495 103116016 + MGP_WSBEiJ_P0083859 C2cd3 protein_coding protein_coding MGP_WSBEiJ_T0083860.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103016508 103068356 + MGP_WSBEiJ_P0083860 C2cd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083861.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103016543 103052173 + C2cd3 protein_coding retained_intron MGP_WSBEiJ_T0083862.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103040074 103100330 + MGP_WSBEiJ_P0083862 C2cd3 protein_coding protein_coding MGP_WSBEiJ_T0083863.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103065486 103068082 + C2cd3 protein_coding retained_intron MGP_WSBEiJ_T0083864.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103074130 103077312 + MGP_WSBEiJ_P0083864 C2cd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083865.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103075158 103116018 + MGP_WSBEiJ_P0083865 C2cd3 protein_coding protein_coding MGP_WSBEiJ_T0083866.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103088369 103089773 + C2cd3 protein_coding retained_intron MGP_WSBEiJ_T0083867.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103094701 103100719 + MGP_WSBEiJ_P0083867 C2cd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083868.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103097226 103100678 + C2cd3 protein_coding retained_intron MGP_WSBEiJ_T0083869.1 MGP_WSBEiJ_G0031712.1 mouse_genomes_project 7 103110073 103116018 + MGP_WSBEiJ_P0083869 C2cd3 protein_coding protein_coding MGP_WSBEiJ_T0008693.1 MGP_WSBEiJ_G0007031.1 mouse_genomes_project 7 35183866 35190481 + Gm26790 lincRNA lincRNA MGP_WSBEiJ_T0084124.1 MGP_WSBEiJ_G0031780.1 mouse_genomes_project 7 105752705 105753644 + MGP_WSBEiJ_P0084124 Olfr576 protein_coding protein_coding MGP_WSBEiJ_T0084125.1 MGP_WSBEiJ_G0031780.1 mouse_genomes_project 7 105752705 105762816 + MGP_WSBEiJ_P0084125 Olfr576 protein_coding protein_coding MGP_WSBEiJ_T0098517.1 MGP_WSBEiJ_G0037180.1 mouse_genomes_project 7 131140145 131140240 + Gm22747 snRNA snRNA MGP_WSBEiJ_T0002252.1 MGP_WSBEiJ_G0002170.1 mouse_genomes_project 7 126159829 126165268 + TEC TEC MGP_WSBEiJ_T0081490.1 MGP_WSBEiJ_G0031138.1 mouse_genomes_project 7 28684745 28700289 - MGP_WSBEiJ_P0081490 Zfp27 protein_coding protein_coding MGP_WSBEiJ_T0081491.1 MGP_WSBEiJ_G0031138.1 mouse_genomes_project 7 28685127 28691877 - MGP_WSBEiJ_P0081491 Zfp27 protein_coding protein_coding MGP_WSBEiJ_T0081492.1 MGP_WSBEiJ_G0031138.1 mouse_genomes_project 7 28685128 28698820 - MGP_WSBEiJ_P0081492 Zfp27 protein_coding protein_coding MGP_WSBEiJ_T0081493.1 MGP_WSBEiJ_G0031138.1 mouse_genomes_project 7 28685128 28700248 - MGP_WSBEiJ_P0081493 Zfp27 protein_coding protein_coding MGP_WSBEiJ_T0081494.1 MGP_WSBEiJ_G0031138.1 mouse_genomes_project 7 28685491 28690254 - MGP_WSBEiJ_P0081494 Zfp27 protein_coding protein_coding MGP_WSBEiJ_T0081495.1 MGP_WSBEiJ_G0031138.1 mouse_genomes_project 7 28691625 28698776 - Zfp27 protein_coding processed_transcript MGP_WSBEiJ_T0083749.1 MGP_WSBEiJ_G0031681.1 mouse_genomes_project 7 100714432 100810137 - MGP_WSBEiJ_P0083749 Acer3 protein_coding protein_coding MGP_WSBEiJ_T0083750.1 MGP_WSBEiJ_G0031681.1 mouse_genomes_project 7 100717056 100810215 - MGP_WSBEiJ_P0083750 Acer3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083751.1 MGP_WSBEiJ_G0031681.1 mouse_genomes_project 7 100724921 100728863 - Acer3 protein_coding retained_intron MGP_WSBEiJ_T0083752.1 MGP_WSBEiJ_G0031681.1 mouse_genomes_project 7 100751111 100810193 - MGP_WSBEiJ_P0083752 Acer3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002193.1 MGP_WSBEiJ_G0002112.1 mouse_genomes_project 7 56879391 56880569 - TEC TEC MGP_WSBEiJ_T0002234.1 MGP_WSBEiJ_G0002152.1 mouse_genomes_project 7 81096685 81099495 - TEC TEC MGP_WSBEiJ_T0008679.1 MGP_WSBEiJ_G0007018.1 mouse_genomes_project 7 29009586 29011838 + lincRNA lincRNA MGP_WSBEiJ_T0085451.1 MGP_WSBEiJ_G0032181.1 mouse_genomes_project 7 131638132 131686293 + MGP_WSBEiJ_P0085451 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085453.1 MGP_WSBEiJ_G0032181.1 mouse_genomes_project 7 131679339 131682451 + MGP_WSBEiJ_P0085453 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080099.1 MGP_WSBEiJ_G0030718.1 mouse_genomes_project 7 1636407 1655588 - MGP_WSBEiJ_P0080099 Tmem150b protein_coding protein_coding MGP_WSBEiJ_T0080101.1 MGP_WSBEiJ_G0030718.1 mouse_genomes_project 7 1645223 1655421 - MGP_WSBEiJ_P0080101 Tmem150b protein_coding protein_coding MGP_WSBEiJ_T0081594.1 MGP_WSBEiJ_G0031165.1 mouse_genomes_project 7 29235669 29237831 - MGP_WSBEiJ_P0081594 Hcst protein_coding protein_coding MGP_WSBEiJ_T0011483.1 MGP_WSBEiJ_G0009640.1 mouse_genomes_project 7 39998735 39999007 + Gm24910 misc_RNA misc_RNA MGP_WSBEiJ_T0085777.1 MGP_WSBEiJ_G0032242.1 mouse_genomes_project 7 135701678 135726930 - MGP_WSBEiJ_P0085777 Ikzf5 protein_coding protein_coding MGP_WSBEiJ_T0085778.1 MGP_WSBEiJ_G0032242.1 mouse_genomes_project 7 135706535 135726787 - MGP_WSBEiJ_P0085778 Ikzf5 protein_coding protein_coding MGP_WSBEiJ_T0085779.1 MGP_WSBEiJ_G0032242.1 mouse_genomes_project 7 135707404 135726904 - MGP_WSBEiJ_P0085779 Ikzf5 protein_coding protein_coding MGP_WSBEiJ_T0085780.1 MGP_WSBEiJ_G0032242.1 mouse_genomes_project 7 135710734 135725492 - MGP_WSBEiJ_P0085780 Ikzf5 protein_coding protein_coding MGP_WSBEiJ_T0002150.1 MGP_WSBEiJ_G0002069.1 mouse_genomes_project 7 403117 404586 - TEC TEC MGP_WSBEiJ_T0002166.1 MGP_WSBEiJ_G0002085.1 mouse_genomes_project 7 36194819 36198804 + TEC TEC MGP_WSBEiJ_T0084789.1 MGP_WSBEiJ_G0032050.1 mouse_genomes_project 7 123194761 123225904 - MGP_WSBEiJ_P0084789 Pdilt protein_coding protein_coding MGP_WSBEiJ_T0080102.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1671607 1679911 + MGP_WSBEiJ_P0080102 Suv420h2 protein_coding protein_coding MGP_WSBEiJ_T0080103.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1671645 1673569 + Suv420h2 protein_coding retained_intron MGP_WSBEiJ_T0080104.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1671648 1674534 + MGP_WSBEiJ_P0080104 Suv420h2 protein_coding protein_coding MGP_WSBEiJ_T0080105.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1671659 1679911 + MGP_WSBEiJ_P0080105 Suv420h2 protein_coding protein_coding MGP_WSBEiJ_T0080106.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1671677 1679911 + MGP_WSBEiJ_P0080106 Suv420h2 protein_coding protein_coding MGP_WSBEiJ_T0080107.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1673115 1674018 + Suv420h2 protein_coding retained_intron MGP_WSBEiJ_T0080108.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1673330 1679295 + MGP_WSBEiJ_P0080108 Suv420h2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080109.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1673804 1678305 + Suv420h2 protein_coding retained_intron MGP_WSBEiJ_T0080110.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1673934 1674960 + Suv420h2 protein_coding retained_intron MGP_WSBEiJ_T0080111.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1674137 1675084 + Suv420h2 protein_coding retained_intron MGP_WSBEiJ_T0080112.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1674224 1678518 + Suv420h2 protein_coding retained_intron MGP_WSBEiJ_T0080113.1 MGP_WSBEiJ_G0030719.1 mouse_genomes_project 7 1678204 1678993 + MGP_WSBEiJ_P0080113 Suv420h2 protein_coding protein_coding MGP_WSBEiJ_T0083268.1 MGP_WSBEiJ_G0031555.1 mouse_genomes_project 7 81797192 81809752 + MGP_WSBEiJ_P0083268 Gdpgp1 protein_coding protein_coding MGP_WSBEiJ_T0081240.1 MGP_WSBEiJ_G0031077.1 mouse_genomes_project 7 26629831 26638246 - MGP_WSBEiJ_P0081240 Psmc4 protein_coding protein_coding MGP_WSBEiJ_T0081241.1 MGP_WSBEiJ_G0031077.1 mouse_genomes_project 7 26629840 26635162 - Psmc4 protein_coding retained_intron MGP_WSBEiJ_T0081242.1 MGP_WSBEiJ_G0031077.1 mouse_genomes_project 7 26629841 26638201 - Psmc4 protein_coding retained_intron MGP_WSBEiJ_T0081243.1 MGP_WSBEiJ_G0031077.1 mouse_genomes_project 7 26630712 26635489 - Psmc4 protein_coding retained_intron MGP_WSBEiJ_T0081244.1 MGP_WSBEiJ_G0031077.1 mouse_genomes_project 7 26630789 26635658 - Psmc4 protein_coding processed_transcript MGP_WSBEiJ_T0081245.1 MGP_WSBEiJ_G0031077.1 mouse_genomes_project 7 26635396 26638201 - Psmc4 protein_coding retained_intron MGP_WSBEiJ_T0015401.1 MGP_WSBEiJ_G0013531.1 mouse_genomes_project 7 126896944 126897454 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086355.1 MGP_WSBEiJ_G0032390.1 mouse_genomes_project 7 147388730 147391333 + MGP_WSBEiJ_P0086355 Tnni2 protein_coding protein_coding MGP_WSBEiJ_T0086356.1 MGP_WSBEiJ_G0032390.1 mouse_genomes_project 7 147388738 147390959 + MGP_WSBEiJ_P0086356 Tnni2 protein_coding protein_coding MGP_WSBEiJ_T0086357.1 MGP_WSBEiJ_G0032390.1 mouse_genomes_project 7 147389252 147391291 + MGP_WSBEiJ_P0086357 Tnni2 protein_coding protein_coding MGP_WSBEiJ_T0086358.1 MGP_WSBEiJ_G0032390.1 mouse_genomes_project 7 147389830 147391331 + Tnni2 protein_coding retained_intron MGP_WSBEiJ_T0086359.1 MGP_WSBEiJ_G0032390.1 mouse_genomes_project 7 147389902 147390782 + Tnni2 protein_coding retained_intron MGP_WSBEiJ_T0086360.1 MGP_WSBEiJ_G0032390.1 mouse_genomes_project 7 147390093 147391328 + MGP_WSBEiJ_P0086360 Tnni2 protein_coding protein_coding MGP_WSBEiJ_T0085471.1 MGP_WSBEiJ_G0032185.1 mouse_genomes_project 7 131708723 131724750 + MGP_WSBEiJ_P0085471 Rnf40 protein_coding protein_coding MGP_WSBEiJ_T0085472.1 MGP_WSBEiJ_G0032185.1 mouse_genomes_project 7 131708875 131723545 + MGP_WSBEiJ_P0085472 Rnf40 protein_coding protein_coding MGP_WSBEiJ_T0085473.1 MGP_WSBEiJ_G0032185.1 mouse_genomes_project 7 131708875 131723536 + MGP_WSBEiJ_P0085473 Rnf40 protein_coding protein_coding MGP_WSBEiJ_T0085474.1 MGP_WSBEiJ_G0032185.1 mouse_genomes_project 7 131712369 131714681 + Rnf40 protein_coding retained_intron MGP_WSBEiJ_T0085475.1 MGP_WSBEiJ_G0032185.1 mouse_genomes_project 7 131712830 131716187 + Rnf40 protein_coding retained_intron MGP_WSBEiJ_T0085476.1 MGP_WSBEiJ_G0032185.1 mouse_genomes_project 7 131716767 131720558 + Rnf40 protein_coding retained_intron MGP_WSBEiJ_T0002156.1 MGP_WSBEiJ_G0002075.1 mouse_genomes_project 7 16890261 16893482 - TEC TEC MGP_WSBEiJ_T0085978.1 MGP_WSBEiJ_G0032291.1 mouse_genomes_project 7 144516295 144559337 + MGP_WSBEiJ_P0085978 Adgra1 protein_coding protein_coding MGP_WSBEiJ_T0085979.1 MGP_WSBEiJ_G0032291.1 mouse_genomes_project 7 144516486 144527734 + Adgra1 protein_coding processed_transcript MGP_WSBEiJ_T0085980.1 MGP_WSBEiJ_G0032291.1 mouse_genomes_project 7 144517083 144523314 + Adgra1 protein_coding retained_intron MGP_WSBEiJ_T0080127.1 MGP_WSBEiJ_G0030723.1 mouse_genomes_project 7 1718028 1719432 + MGP_WSBEiJ_P0080127 Tmem190 protein_coding protein_coding MGP_WSBEiJ_T0080128.1 MGP_WSBEiJ_G0030723.1 mouse_genomes_project 7 1718042 1718448 + Tmem190 protein_coding retained_intron MGP_WSBEiJ_T0085009.1 MGP_WSBEiJ_G0032102.1 mouse_genomes_project 7 127374627 127380341 + MGP_WSBEiJ_P0085009 Aqp8 protein_coding protein_coding MGP_WSBEiJ_T0085010.1 MGP_WSBEiJ_G0032102.1 mouse_genomes_project 7 127374648 127380323 + MGP_WSBEiJ_P0085010 Aqp8 protein_coding protein_coding MGP_WSBEiJ_T0085011.1 MGP_WSBEiJ_G0032102.1 mouse_genomes_project 7 127376087 127380335 + Aqp8 protein_coding processed_transcript MGP_WSBEiJ_T0084542.1 MGP_WSBEiJ_G0032001.1 mouse_genomes_project 7 114206806 114267114 - MGP_WSBEiJ_P0084542 Mrvi1 protein_coding protein_coding MGP_WSBEiJ_T0084543.1 MGP_WSBEiJ_G0032001.1 mouse_genomes_project 7 114206810 114320628 - MGP_WSBEiJ_P0084543 Mrvi1 protein_coding protein_coding MGP_WSBEiJ_T0084544.1 MGP_WSBEiJ_G0032001.1 mouse_genomes_project 7 114206812 114284678 - MGP_WSBEiJ_P0084544 Mrvi1 protein_coding protein_coding MGP_WSBEiJ_T0084545.1 MGP_WSBEiJ_G0032001.1 mouse_genomes_project 7 114260511 114264423 - Mrvi1 protein_coding processed_transcript MGP_WSBEiJ_T0084546.1 MGP_WSBEiJ_G0032001.1 mouse_genomes_project 7 114264579 114320225 - MGP_WSBEiJ_P0084546 Mrvi1 protein_coding protein_coding MGP_WSBEiJ_T0084547.1 MGP_WSBEiJ_G0032001.1 mouse_genomes_project 7 114265069 114267383 - Mrvi1 protein_coding retained_intron MGP_WSBEiJ_T0084548.1 MGP_WSBEiJ_G0032001.1 mouse_genomes_project 7 114267095 114320371 - MGP_WSBEiJ_P0084548 Mrvi1 protein_coding protein_coding MGP_WSBEiJ_T0101083.1 MGP_WSBEiJ_G0039540.1 mouse_genomes_project 7 87699716 87701481 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0086469.1 MGP_WSBEiJ_G0032406.1 mouse_genomes_project 7 148478207 148504683 + MGP_WSBEiJ_P0086469 Slc22a18 protein_coding protein_coding MGP_WSBEiJ_T0086470.1 MGP_WSBEiJ_G0032406.1 mouse_genomes_project 7 148479214 148481811 + Slc22a18 protein_coding processed_transcript MGP_WSBEiJ_T0086471.1 MGP_WSBEiJ_G0032406.1 mouse_genomes_project 7 148479229 148504685 + MGP_WSBEiJ_P0086471 Slc22a18 protein_coding protein_coding MGP_WSBEiJ_T0086472.1 MGP_WSBEiJ_G0032406.1 mouse_genomes_project 7 148479261 148502406 + MGP_WSBEiJ_P0086472 Slc22a18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086473.1 MGP_WSBEiJ_G0032406.1 mouse_genomes_project 7 148479273 148504685 + MGP_WSBEiJ_P0086473 Slc22a18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086474.1 MGP_WSBEiJ_G0032406.1 mouse_genomes_project 7 148479298 148502407 + MGP_WSBEiJ_P0086474 Slc22a18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082253.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44734288 44738839 + MGP_WSBEiJ_P0082253 Fam71e1 protein_coding protein_coding MGP_WSBEiJ_T0082254.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44734295 44738042 + Fam71e1 protein_coding retained_intron MGP_WSBEiJ_T0082255.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44734306 44734856 + MGP_WSBEiJ_P0082255 Fam71e1 protein_coding protein_coding MGP_WSBEiJ_T0082256.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44734365 44738832 + MGP_WSBEiJ_P0082256 Fam71e1 protein_coding protein_coding MGP_WSBEiJ_T0082257.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44734375 44738832 + MGP_WSBEiJ_P0082257 Fam71e1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082258.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44734379 44739185 + Fam71e1 protein_coding retained_intron MGP_WSBEiJ_T0082259.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44734379 44735716 + Fam71e1 protein_coding retained_intron MGP_WSBEiJ_T0082260.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44734401 44738071 + Fam71e1 protein_coding retained_intron MGP_WSBEiJ_T0082261.1 MGP_WSBEiJ_G0031317.1 mouse_genomes_project 7 44738123 44738831 + Fam71e1 protein_coding processed_transcript MGP_WSBEiJ_T0085629.1 MGP_WSBEiJ_G0032217.1 mouse_genomes_project 7 132411358 132415824 + MGP_WSBEiJ_P0085629 Tgfb1i1 protein_coding protein_coding MGP_WSBEiJ_T0101113.1 MGP_WSBEiJ_G0039570.1 mouse_genomes_project 7 107038094 107038980 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085454.1 MGP_WSBEiJ_G0032182.1 mouse_genomes_project 7 131680637 131684519 + MGP_WSBEiJ_P0085454 Tmem265 protein_coding protein_coding MGP_WSBEiJ_T0085455.1 MGP_WSBEiJ_G0032182.1 mouse_genomes_project 7 131680826 131686179 + MGP_WSBEiJ_P0085455 Tmem265 protein_coding protein_coding MGP_WSBEiJ_T0097104.1 MGP_WSBEiJ_G0035785.1 mouse_genomes_project 7 136411566 136411686 + n-R5s159 rRNA rRNA MGP_WSBEiJ_T0015415.1 MGP_WSBEiJ_G0013545.1 mouse_genomes_project 7 132511308 132511503 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083542.1 MGP_WSBEiJ_G0031627.1 mouse_genomes_project 7 88837322 88845436 + MGP_WSBEiJ_P0083542 protein_coding protein_coding MGP_WSBEiJ_T0083829.1 MGP_WSBEiJ_G0031701.1 mouse_genomes_project 7 102413086 102428788 - MGP_WSBEiJ_P0083829 Neu3 protein_coding protein_coding MGP_WSBEiJ_T0002174.1 MGP_WSBEiJ_G0002093.1 mouse_genomes_project 7 39402784 39405783 + TEC TEC MGP_WSBEiJ_T0084261.1 MGP_WSBEiJ_G0031887.1 mouse_genomes_project 7 108182599 108183622 + MGP_WSBEiJ_P0084261 protein_coding protein_coding MGP_WSBEiJ_T0082851.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60109165 60130563 + MGP_WSBEiJ_P0082851 Ube3a protein_coding protein_coding MGP_WSBEiJ_T0082852.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60109165 60155639 + MGP_WSBEiJ_P0082852 Ube3a protein_coding protein_coding MGP_WSBEiJ_T0082853.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60109185 60172283 + Ube3a protein_coding retained_intron MGP_WSBEiJ_T0082854.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60109540 60159666 + Ube3a protein_coding processed_transcript MGP_WSBEiJ_T0082855.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60109588 60130906 + Ube3a protein_coding processed_transcript MGP_WSBEiJ_T0082856.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60109646 60159929 + MGP_WSBEiJ_P0082856 Ube3a protein_coding protein_coding MGP_WSBEiJ_T0082857.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60109921 60183234 + MGP_WSBEiJ_P0082857 Ube3a protein_coding protein_coding MGP_WSBEiJ_T0082858.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60126299 60155549 + MGP_WSBEiJ_P0082858 Ube3a protein_coding protein_coding MGP_WSBEiJ_T0082859.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60160512 60165561 + Ube3a protein_coding retained_intron MGP_WSBEiJ_T0082860.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60167217 60170582 + Ube3a protein_coding retained_intron MGP_WSBEiJ_T0082861.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60170998 60183236 + MGP_WSBEiJ_P0082861 Ube3a protein_coding protein_coding MGP_WSBEiJ_T0082862.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60171762 60183246 + MGP_WSBEiJ_P0082862 Ube3a protein_coding protein_coding MGP_WSBEiJ_T0082863.1 MGP_WSBEiJ_G0031473.1 mouse_genomes_project 7 60181814 60183248 + Ube3a protein_coding retained_intron MGP_WSBEiJ_T0083053.1 MGP_WSBEiJ_G0031511.1 mouse_genomes_project 7 68710294 68741918 - MGP_WSBEiJ_P0083053 Synm protein_coding protein_coding MGP_WSBEiJ_T0083054.1 MGP_WSBEiJ_G0031511.1 mouse_genomes_project 7 68710294 68741918 - MGP_WSBEiJ_P0083054 Synm protein_coding protein_coding MGP_WSBEiJ_T0010683.1 MGP_WSBEiJ_G0008840.1 mouse_genomes_project 7 43625913 43625986 + Mir7051 miRNA miRNA MGP_WSBEiJ_T0086279.1 MGP_WSBEiJ_G0032372.1 mouse_genomes_project 7 146322718 146326895 + MGP_WSBEiJ_P0086279 Cd151 protein_coding protein_coding MGP_WSBEiJ_T0086280.1 MGP_WSBEiJ_G0032372.1 mouse_genomes_project 7 146322718 146326895 + MGP_WSBEiJ_P0086280 Cd151 protein_coding protein_coding MGP_WSBEiJ_T0086281.1 MGP_WSBEiJ_G0032372.1 mouse_genomes_project 7 146324143 146326895 + MGP_WSBEiJ_P0086281 Cd151 protein_coding protein_coding MGP_WSBEiJ_T0084128.1 MGP_WSBEiJ_G0031783.1 mouse_genomes_project 7 105831843 105877803 + MGP_WSBEiJ_P0084128 protein_coding protein_coding MGP_WSBEiJ_T0081946.1 MGP_WSBEiJ_G0031235.1 mouse_genomes_project 7 34702322 34765371 + MGP_WSBEiJ_P0081946 Rhpn2 protein_coding protein_coding MGP_WSBEiJ_T0081947.1 MGP_WSBEiJ_G0031235.1 mouse_genomes_project 7 34702522 34765367 + MGP_WSBEiJ_P0081947 Rhpn2 protein_coding protein_coding MGP_WSBEiJ_T0081948.1 MGP_WSBEiJ_G0031235.1 mouse_genomes_project 7 34750831 34753169 + Rhpn2 protein_coding retained_intron MGP_WSBEiJ_T0081949.1 MGP_WSBEiJ_G0031235.1 mouse_genomes_project 7 34754095 34758300 + Rhpn2 protein_coding retained_intron MGP_WSBEiJ_T0080146.1 MGP_WSBEiJ_G0030728.1 mouse_genomes_project 7 1786969 1809154 - MGP_WSBEiJ_P0080146 Isoc2b protein_coding unknown_likely_coding MGP_WSBEiJ_T0083536.1 MGP_WSBEiJ_G0031621.1 mouse_genomes_project 7 88505049 88515544 + MGP_WSBEiJ_P0083536 Olfr301 protein_coding protein_coding MGP_WSBEiJ_T0008700.1 MGP_WSBEiJ_G0007038.1 mouse_genomes_project 7 36787372 36793324 + Gm28077 lincRNA lincRNA MGP_WSBEiJ_T0097091.1 MGP_WSBEiJ_G0035772.1 mouse_genomes_project 7 3684572 3684680 + n-R5s150 rRNA rRNA MGP_WSBEiJ_T0080314.1 MGP_WSBEiJ_G0030813.1 mouse_genomes_project 7 10267627 10274095 + MGP_WSBEiJ_P0080314 Zfp446 protein_coding protein_coding MGP_WSBEiJ_T0080315.1 MGP_WSBEiJ_G0030813.1 mouse_genomes_project 7 10267627 10273182 + MGP_WSBEiJ_P0080315 Zfp446 protein_coding protein_coding MGP_WSBEiJ_T0080316.1 MGP_WSBEiJ_G0030813.1 mouse_genomes_project 7 10267672 10271249 + Zfp446 protein_coding retained_intron MGP_WSBEiJ_T0080317.1 MGP_WSBEiJ_G0030813.1 mouse_genomes_project 7 10268816 10272461 + MGP_WSBEiJ_P0080317 Zfp446 protein_coding protein_coding MGP_WSBEiJ_T0080318.1 MGP_WSBEiJ_G0030813.1 mouse_genomes_project 7 10269299 10274126 + Zfp446 protein_coding retained_intron MGP_WSBEiJ_T0081164.1 MGP_WSBEiJ_G0031056.1 mouse_genomes_project 7 25825107 25847786 - MGP_WSBEiJ_P0081164 Ltbp4 protein_coding protein_coding MGP_WSBEiJ_T0084950.1 MGP_WSBEiJ_G0032093.1 mouse_genomes_project 7 126010974 126027278 - MGP_WSBEiJ_P0084950 Ern2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084951.1 MGP_WSBEiJ_G0032093.1 mouse_genomes_project 7 126011019 126027275 - MGP_WSBEiJ_P0084951 Ern2 protein_coding protein_coding MGP_WSBEiJ_T0084952.1 MGP_WSBEiJ_G0032093.1 mouse_genomes_project 7 126011139 126025054 - MGP_WSBEiJ_P0084952 Ern2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084641.1 MGP_WSBEiJ_G0032023.1 mouse_genomes_project 7 118096412 118101242 - MGP_WSBEiJ_P0084641 Calca protein_coding protein_coding MGP_WSBEiJ_T0084642.1 MGP_WSBEiJ_G0032023.1 mouse_genomes_project 7 118096502 118097575 - Calca protein_coding retained_intron MGP_WSBEiJ_T0084643.1 MGP_WSBEiJ_G0032023.1 mouse_genomes_project 7 118097486 118101192 - MGP_WSBEiJ_P0084643 Calca protein_coding protein_coding MGP_WSBEiJ_T0084644.1 MGP_WSBEiJ_G0032023.1 mouse_genomes_project 7 118098175 118101197 - MGP_WSBEiJ_P0084644 Calca protein_coding protein_coding MGP_WSBEiJ_T0084645.1 MGP_WSBEiJ_G0032023.1 mouse_genomes_project 7 118098292 118101180 - MGP_WSBEiJ_P0084645 Calca protein_coding protein_coding MGP_WSBEiJ_T0084646.1 MGP_WSBEiJ_G0032023.1 mouse_genomes_project 7 118099223 118101191 - MGP_WSBEiJ_P0084646 Calca protein_coding protein_coding MGP_WSBEiJ_T0084647.1 MGP_WSBEiJ_G0032023.1 mouse_genomes_project 7 118099254 118101156 - MGP_WSBEiJ_P0084647 Calca protein_coding protein_coding MGP_WSBEiJ_T0082726.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 49602461 49667697 + Nav2 protein_coding processed_transcript MGP_WSBEiJ_T0082727.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 49662980 49672356 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0082728.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 49663004 50340943 + MGP_WSBEiJ_P0082728 Nav2 protein_coding protein_coding MGP_WSBEiJ_T0082729.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 49959041 50129252 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0082730.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 49959041 50344140 + MGP_WSBEiJ_P0082730 Nav2 protein_coding protein_coding MGP_WSBEiJ_T0082731.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 49959695 50344143 + MGP_WSBEiJ_P0082731 Nav2 protein_coding protein_coding MGP_WSBEiJ_T0082732.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 49959696 50220709 + MGP_WSBEiJ_P0082732 Nav2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082733.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50018050 50131018 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0082734.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50018165 50158357 + Nav2 protein_coding processed_transcript MGP_WSBEiJ_T0082735.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50018167 50019811 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0082736.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50067166 50344144 + MGP_WSBEiJ_P0082736 Nav2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082737.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50067518 50344144 + MGP_WSBEiJ_P0082737 Nav2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082738.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50083558 50175153 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0082739.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50171273 50188367 + Nav2 protein_coding processed_transcript MGP_WSBEiJ_T0082740.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50278691 50287483 + MGP_WSBEiJ_P0082740 Nav2 protein_coding protein_coding MGP_WSBEiJ_T0082741.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50284393 50287224 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0082742.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50307399 50308865 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0082743.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50319353 50320939 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0082744.1 MGP_WSBEiJ_G0031447.1 mouse_genomes_project 7 50321463 50324099 + Nav2 protein_coding retained_intron MGP_WSBEiJ_T0086183.1 MGP_WSBEiJ_G0032359.1 mouse_genomes_project 7 146117406 146118209 - MGP_WSBEiJ_P0086183 Sct protein_coding protein_coding MGP_WSBEiJ_T0086184.1 MGP_WSBEiJ_G0032359.1 mouse_genomes_project 7 146117429 146118207 - MGP_WSBEiJ_P0086184 Sct protein_coding protein_coding MGP_WSBEiJ_T0101082.1 MGP_WSBEiJ_G0039539.1 mouse_genomes_project 7 87555969 87556876 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010733.1 MGP_WSBEiJ_G0008890.1 mouse_genomes_project 7 116118153 116118282 + Gm44462 miRNA miRNA MGP_WSBEiJ_T0101032.1 MGP_WSBEiJ_G0039489.1 mouse_genomes_project 7 41516677 41516917 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100146.1 MGP_WSBEiJ_G0038730.1 mouse_genomes_project 7 39060231 39060576 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100147.1 MGP_WSBEiJ_G0038730.1 mouse_genomes_project 7 39060510 39063624 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0015258.1 MGP_WSBEiJ_G0013388.1 mouse_genomes_project 7 24238218 24238590 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084676.1 MGP_WSBEiJ_G0032027.1 mouse_genomes_project 7 119634721 119645835 + MGP_WSBEiJ_P0084676 1110004F10Rik protein_coding protein_coding MGP_WSBEiJ_T0084677.1 MGP_WSBEiJ_G0032027.1 mouse_genomes_project 7 119634759 119646751 + MGP_WSBEiJ_P0084677 1110004F10Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098491.1 MGP_WSBEiJ_G0037154.1 mouse_genomes_project 7 83354471 83354579 + Gm26149 snRNA snRNA MGP_WSBEiJ_T0008857.1 MGP_WSBEiJ_G0007141.1 mouse_genomes_project 7 124447327 124451409 - 9030407P20Rik lincRNA lincRNA MGP_WSBEiJ_T0008858.1 MGP_WSBEiJ_G0007141.1 mouse_genomes_project 7 124447623 124451449 - 9030407P20Rik lincRNA lincRNA MGP_WSBEiJ_T0005122.1 MGP_WSBEiJ_G0004358.1 mouse_genomes_project 7 34947218 34948778 + B230322F03Rik antisense antisense MGP_WSBEiJ_T0084342.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108631345 108637661 + MGP_WSBEiJ_P0084342 Ilk protein_coding protein_coding MGP_WSBEiJ_T0084343.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108631424 108637654 + Ilk protein_coding retained_intron MGP_WSBEiJ_T0084344.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108631478 108637661 + MGP_WSBEiJ_P0084344 Ilk protein_coding protein_coding MGP_WSBEiJ_T0084345.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108631486 108635781 + MGP_WSBEiJ_P0084345 Ilk protein_coding protein_coding MGP_WSBEiJ_T0084346.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108631854 108636099 + Ilk protein_coding retained_intron MGP_WSBEiJ_T0084347.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108631876 108636213 + Ilk protein_coding retained_intron MGP_WSBEiJ_T0084349.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108634925 108636502 + Ilk protein_coding retained_intron MGP_WSBEiJ_T0084350.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108635248 108635912 + Ilk protein_coding retained_intron MGP_WSBEiJ_T0084351.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108635248 108636646 + MGP_WSBEiJ_P0084351 Ilk protein_coding protein_coding MGP_WSBEiJ_T0084352.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108635709 108636648 + Ilk protein_coding retained_intron MGP_WSBEiJ_T0084353.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108635919 108636834 + Ilk protein_coding retained_intron MGP_WSBEiJ_T0084354.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108636320 108637514 + Ilk protein_coding retained_intron MGP_WSBEiJ_T0084355.1 MGP_WSBEiJ_G0031904.1 mouse_genomes_project 7 108636518 108637395 + Ilk protein_coding processed_transcript MGP_WSBEiJ_T0080514.1 MGP_WSBEiJ_G0030870.1 mouse_genomes_project 7 14559220 14562847 + MGP_WSBEiJ_P0080514 Gng8 protein_coding protein_coding MGP_WSBEiJ_T0080515.1 MGP_WSBEiJ_G0030870.1 mouse_genomes_project 7 14559646 14562857 + MGP_WSBEiJ_P0080515 Gng8 protein_coding protein_coding MGP_WSBEiJ_T0080516.1 MGP_WSBEiJ_G0030870.1 mouse_genomes_project 7 14559705 14562845 + MGP_WSBEiJ_P0080516 Gng8 protein_coding protein_coding MGP_WSBEiJ_T0080517.1 MGP_WSBEiJ_G0030870.1 mouse_genomes_project 7 14559755 14562848 + Gng8 protein_coding processed_transcript MGP_WSBEiJ_T0080518.1 MGP_WSBEiJ_G0030870.1 mouse_genomes_project 7 14562068 14562858 + Gng8 protein_coding retained_intron MGP_WSBEiJ_T0080519.1 MGP_WSBEiJ_G0030870.1 mouse_genomes_project 7 14562366 14562785 + Gng8 protein_coding retained_intron MGP_WSBEiJ_T0100326.1 MGP_WSBEiJ_G0038818.1 mouse_genomes_project 7 41335167 41335636 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0084384.1 MGP_WSBEiJ_G0031924.1 mouse_genomes_project 7 110001999 110002923 - MGP_WSBEiJ_P0084384 Olfr709-ps1 protein_coding protein_coding MGP_WSBEiJ_T0008862.1 MGP_WSBEiJ_G0007145.1 mouse_genomes_project 7 128583555 128677237 - 3100003L05Rik lincRNA lincRNA MGP_WSBEiJ_T0086197.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146181305 146208985 + MGP_WSBEiJ_P0086197 Eps8l2 protein_coding protein_coding MGP_WSBEiJ_T0086198.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146181381 146208985 + Eps8l2 protein_coding retained_intron MGP_WSBEiJ_T0086199.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146181412 146201791 + Eps8l2 protein_coding processed_transcript MGP_WSBEiJ_T0086200.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146181429 146201789 + Eps8l2 protein_coding retained_intron MGP_WSBEiJ_T0086201.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146181431 146185416 + MGP_WSBEiJ_P0086201 Eps8l2 protein_coding protein_coding MGP_WSBEiJ_T0086202.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146185081 146201926 + Eps8l2 protein_coding retained_intron MGP_WSBEiJ_T0086203.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146203927 146207380 + Eps8l2 protein_coding retained_intron MGP_WSBEiJ_T0086204.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146204134 146207699 + Eps8l2 protein_coding processed_transcript MGP_WSBEiJ_T0086205.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146206210 146207697 + Eps8l2 protein_coding processed_transcript MGP_WSBEiJ_T0086206.1 MGP_WSBEiJ_G0032363.1 mouse_genomes_project 7 146207501 146208632 + Eps8l2 protein_coding processed_transcript MGP_WSBEiJ_T0082183.1 MGP_WSBEiJ_G0031301.1 mouse_genomes_project 7 44180418 44191555 + protein_coding retained_intron MGP_WSBEiJ_T0082184.1 MGP_WSBEiJ_G0031301.1 mouse_genomes_project 7 44180418 44192006 + MGP_WSBEiJ_P0082184 protein_coding protein_coding MGP_WSBEiJ_T0082185.1 MGP_WSBEiJ_G0031301.1 mouse_genomes_project 7 44180418 44191931 + MGP_WSBEiJ_P0082185 protein_coding protein_coding MGP_WSBEiJ_T0086430.1 MGP_WSBEiJ_G0032399.1 mouse_genomes_project 7 147961244 147963687 - MGP_WSBEiJ_P0086430 Ascl2 protein_coding protein_coding MGP_WSBEiJ_T0086431.1 MGP_WSBEiJ_G0032399.1 mouse_genomes_project 7 147961251 147963687 - MGP_WSBEiJ_P0086431 Ascl2 protein_coding protein_coding MGP_WSBEiJ_T0082538.1 MGP_WSBEiJ_G0031389.1 mouse_genomes_project 7 46007984 46029646 - MGP_WSBEiJ_P0082538 Fut2 protein_coding protein_coding MGP_WSBEiJ_T0084246.1 MGP_WSBEiJ_G0031872.1 mouse_genomes_project 7 107809789 107810743 + MGP_WSBEiJ_P0084246 Olfr669 protein_coding protein_coding MGP_WSBEiJ_T0101103.1 MGP_WSBEiJ_G0039560.1 mouse_genomes_project 7 106256310 106257277 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002243.1 MGP_WSBEiJ_G0002161.1 mouse_genomes_project 7 94998402 95002033 + TEC TEC MGP_WSBEiJ_T0083529.1 MGP_WSBEiJ_G0031615.1 mouse_genomes_project 7 88399646 88406773 - MGP_WSBEiJ_P0083529 Olfr309 protein_coding protein_coding MGP_WSBEiJ_T0083530.1 MGP_WSBEiJ_G0031615.1 mouse_genomes_project 7 88399646 88400573 - MGP_WSBEiJ_P0083530 Olfr309 protein_coding protein_coding MGP_WSBEiJ_T0015317.1 MGP_WSBEiJ_G0013447.1 mouse_genomes_project 7 57676554 57677413 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080073.1 MGP_WSBEiJ_G0030711.1 mouse_genomes_project 7 1438752 1449471 - MGP_WSBEiJ_P0080073 Dnaaf3 protein_coding protein_coding MGP_WSBEiJ_T0080448.1 MGP_WSBEiJ_G0030855.1 mouse_genomes_project 7 13879339 13881018 - MGP_WSBEiJ_P0080448 Inafm1 protein_coding protein_coding MGP_WSBEiJ_T0017830.1 MGP_WSBEiJ_G0015119.1 mouse_genomes_project 7 144637945 144653091 + Gm16201 processed_transcript processed_transcript MGP_WSBEiJ_T0017831.1 MGP_WSBEiJ_G0015119.1 mouse_genomes_project 7 144637989 144671951 + Gm16201 processed_transcript processed_transcript MGP_WSBEiJ_T0002269.1 MGP_WSBEiJ_G0002187.1 mouse_genomes_project 7 131935296 131936650 - TEC TEC MGP_WSBEiJ_T0084379.1 MGP_WSBEiJ_G0031919.1 mouse_genomes_project 7 109915630 109916590 + MGP_WSBEiJ_P0084379 Olfr703 protein_coding protein_coding MGP_WSBEiJ_T0083919.1 MGP_WSBEiJ_G0031724.1 mouse_genomes_project 7 103677172 103693422 - MGP_WSBEiJ_P0083919 P2ry2 protein_coding protein_coding MGP_WSBEiJ_T0083920.1 MGP_WSBEiJ_G0031724.1 mouse_genomes_project 7 103677827 103693407 - MGP_WSBEiJ_P0083920 P2ry2 protein_coding protein_coding MGP_WSBEiJ_T0098476.1 MGP_WSBEiJ_G0037139.1 mouse_genomes_project 7 40560674 40560755 + Gm25784 snRNA snRNA MGP_WSBEiJ_T0080848.1 MGP_WSBEiJ_G0030977.1 mouse_genomes_project 7 22570465 22584093 - MGP_WSBEiJ_P0080848 Irgc1 protein_coding protein_coding MGP_WSBEiJ_T0080849.1 MGP_WSBEiJ_G0030977.1 mouse_genomes_project 7 22570465 22574076 - MGP_WSBEiJ_P0080849 Irgc1 protein_coding protein_coding MGP_WSBEiJ_T0080850.1 MGP_WSBEiJ_G0030977.1 mouse_genomes_project 7 22571687 22590400 - MGP_WSBEiJ_P0080850 Irgc1 protein_coding protein_coding MGP_WSBEiJ_T0080851.1 MGP_WSBEiJ_G0030977.1 mouse_genomes_project 7 22588698 22590526 - Irgc1 protein_coding processed_transcript MGP_WSBEiJ_T0080852.1 MGP_WSBEiJ_G0030977.1 mouse_genomes_project 7 22589103 22590516 - Irgc1 protein_coding processed_transcript MGP_WSBEiJ_T0082403.1 MGP_WSBEiJ_G0031358.1 mouse_genomes_project 7 45491772 45496261 - MGP_WSBEiJ_P0082403 Gfy protein_coding protein_coding MGP_WSBEiJ_T0084523.1 MGP_WSBEiJ_G0031997.1 mouse_genomes_project 7 113960738 113962903 + MGP_WSBEiJ_P0084523 Adm protein_coding protein_coding MGP_WSBEiJ_T0084524.1 MGP_WSBEiJ_G0031997.1 mouse_genomes_project 7 113960746 113962902 + MGP_WSBEiJ_P0084524 Adm protein_coding protein_coding MGP_WSBEiJ_T0084525.1 MGP_WSBEiJ_G0031997.1 mouse_genomes_project 7 113961105 113961629 + Adm protein_coding retained_intron MGP_WSBEiJ_T0101055.1 MGP_WSBEiJ_G0039512.1 mouse_genomes_project 7 48712162 48742537 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082294.1 MGP_WSBEiJ_G0031324.1 mouse_genomes_project 7 44858076 44925103 - MGP_WSBEiJ_P0082294 Myh14 protein_coding protein_coding MGP_WSBEiJ_T0082295.1 MGP_WSBEiJ_G0031324.1 mouse_genomes_project 7 44858076 44925103 - MGP_WSBEiJ_P0082295 Myh14 protein_coding protein_coding MGP_WSBEiJ_T0015264.1 MGP_WSBEiJ_G0013394.1 mouse_genomes_project 7 29555805 29556333 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100997.1 MGP_WSBEiJ_G0039454.1 mouse_genomes_project 7 12835897 12836184 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085828.1 MGP_WSBEiJ_G0032256.1 mouse_genomes_project 7 137332243 137368117 + MGP_WSBEiJ_P0085828 Zranb1 protein_coding protein_coding MGP_WSBEiJ_T0085829.1 MGP_WSBEiJ_G0032256.1 mouse_genomes_project 7 137365024 137366932 + Zranb1 protein_coding retained_intron MGP_WSBEiJ_T0082850.1 MGP_WSBEiJ_G0031472.1 mouse_genomes_project 7 59537983 59717536 + MGP_WSBEiJ_P0082850 Atp10a protein_coding protein_coding MGP_WSBEiJ_T0080382.1 MGP_WSBEiJ_G0030833.1 mouse_genomes_project 7 11633110 11666500 - MGP_WSBEiJ_P0080382 Sult2a6 protein_coding protein_coding MGP_WSBEiJ_T0080383.1 MGP_WSBEiJ_G0030833.1 mouse_genomes_project 7 11633118 11666500 - MGP_WSBEiJ_P0080383 Sult2a6 protein_coding protein_coding MGP_WSBEiJ_T0083178.1 MGP_WSBEiJ_G0031537.1 mouse_genomes_project 7 80852462 80868160 - MGP_WSBEiJ_P0083178 Rlbp1 protein_coding protein_coding MGP_WSBEiJ_T0083179.1 MGP_WSBEiJ_G0031537.1 mouse_genomes_project 7 80852463 80868071 - MGP_WSBEiJ_P0083179 Rlbp1 protein_coding protein_coding MGP_WSBEiJ_T0083180.1 MGP_WSBEiJ_G0031537.1 mouse_genomes_project 7 80853137 80857306 - Rlbp1 protein_coding retained_intron MGP_WSBEiJ_T0083181.1 MGP_WSBEiJ_G0031537.1 mouse_genomes_project 7 80853513 80865224 - MGP_WSBEiJ_P0083181 Rlbp1 protein_coding protein_coding MGP_WSBEiJ_T0083182.1 MGP_WSBEiJ_G0031537.1 mouse_genomes_project 7 80856986 80867653 - MGP_WSBEiJ_P0083182 Rlbp1 protein_coding protein_coding MGP_WSBEiJ_T0083183.1 MGP_WSBEiJ_G0031537.1 mouse_genomes_project 7 80859557 80867717 - MGP_WSBEiJ_P0083183 Rlbp1 protein_coding protein_coding MGP_WSBEiJ_T0083184.1 MGP_WSBEiJ_G0031537.1 mouse_genomes_project 7 80862907 80867586 - MGP_WSBEiJ_P0083184 Rlbp1 protein_coding protein_coding MGP_WSBEiJ_T0083185.1 MGP_WSBEiJ_G0031537.1 mouse_genomes_project 7 80864969 80868024 - MGP_WSBEiJ_P0083185 Rlbp1 protein_coding protein_coding MGP_WSBEiJ_T0002266.1 MGP_WSBEiJ_G0002184.1 mouse_genomes_project 7 131570731 131572133 + TEC TEC MGP_WSBEiJ_T0015421.1 MGP_WSBEiJ_G0013551.1 mouse_genomes_project 7 139118217 139120777 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084857.1 MGP_WSBEiJ_G0032069.1 mouse_genomes_project 7 124407195 124431488 + MGP_WSBEiJ_P0084857 Uqcrc2 protein_coding protein_coding MGP_WSBEiJ_T0084858.1 MGP_WSBEiJ_G0032069.1 mouse_genomes_project 7 124407259 124415237 + Uqcrc2 protein_coding processed_transcript MGP_WSBEiJ_T0084859.1 MGP_WSBEiJ_G0032069.1 mouse_genomes_project 7 124407534 124417262 + Uqcrc2 protein_coding processed_transcript MGP_WSBEiJ_T0084860.1 MGP_WSBEiJ_G0032069.1 mouse_genomes_project 7 124409681 124431171 + Uqcrc2 protein_coding processed_transcript MGP_WSBEiJ_T0084861.1 MGP_WSBEiJ_G0032069.1 mouse_genomes_project 7 124416937 124422952 + Uqcrc2 protein_coding retained_intron MGP_WSBEiJ_T0084862.1 MGP_WSBEiJ_G0032069.1 mouse_genomes_project 7 124423301 124429877 + Uqcrc2 protein_coding retained_intron MGP_WSBEiJ_T0083683.1 MGP_WSBEiJ_G0031669.1 mouse_genomes_project 7 99918399 99926277 + MGP_WSBEiJ_P0083683 Kctd14 protein_coding protein_coding MGP_WSBEiJ_T0083684.1 MGP_WSBEiJ_G0031669.1 mouse_genomes_project 7 99920280 99926272 + MGP_WSBEiJ_P0083684 Kctd14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083685.1 MGP_WSBEiJ_G0031669.1 mouse_genomes_project 7 99920280 99926275 + MGP_WSBEiJ_P0083685 Kctd14 protein_coding protein_coding MGP_WSBEiJ_T0083686.1 MGP_WSBEiJ_G0031669.1 mouse_genomes_project 7 99920280 99926275 + MGP_WSBEiJ_P0083686 Kctd14 protein_coding protein_coding MGP_WSBEiJ_T0083687.1 MGP_WSBEiJ_G0031669.1 mouse_genomes_project 7 99920280 99925477 + MGP_WSBEiJ_P0083687 Kctd14 protein_coding protein_coding MGP_WSBEiJ_T0083688.1 MGP_WSBEiJ_G0031669.1 mouse_genomes_project 7 99920298 99926274 + MGP_WSBEiJ_P0083688 Kctd14 protein_coding protein_coding MGP_WSBEiJ_T0098501.1 MGP_WSBEiJ_G0037164.1 mouse_genomes_project 7 111287757 111287815 - Gm25424 snRNA snRNA MGP_WSBEiJ_T0015350.1 MGP_WSBEiJ_G0013480.1 mouse_genomes_project 7 86734129 86735252 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085908.1 MGP_WSBEiJ_G0032275.1 mouse_genomes_project 7 141459128 141697742 + MGP_WSBEiJ_P0085908 Mgmt protein_coding protein_coding MGP_WSBEiJ_T0080426.1 MGP_WSBEiJ_G0030849.1 mouse_genomes_project 7 13704989 13736609 + MGP_WSBEiJ_P0080426 Slc8a2 protein_coding protein_coding MGP_WSBEiJ_T0084986.1 MGP_WSBEiJ_G0032099.1 mouse_genomes_project 7 127110814 127162800 + MGP_WSBEiJ_P0084986 protein_coding protein_coding MGP_WSBEiJ_T0084987.1 MGP_WSBEiJ_G0032099.1 mouse_genomes_project 7 127110845 127125772 + protein_coding processed_transcript MGP_WSBEiJ_T0084988.1 MGP_WSBEiJ_G0032099.1 mouse_genomes_project 7 127125671 127136231 + MGP_WSBEiJ_P0084988 protein_coding protein_coding MGP_WSBEiJ_T0084989.1 MGP_WSBEiJ_G0032099.1 mouse_genomes_project 7 127125671 127144807 + MGP_WSBEiJ_P0084989 protein_coding protein_coding MGP_WSBEiJ_T0084990.1 MGP_WSBEiJ_G0032099.1 mouse_genomes_project 7 127132426 127171775 + MGP_WSBEiJ_P0084990 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084991.1 MGP_WSBEiJ_G0032099.1 mouse_genomes_project 7 127137127 127147239 + MGP_WSBEiJ_P0084991 protein_coding protein_coding MGP_WSBEiJ_T0084992.1 MGP_WSBEiJ_G0032099.1 mouse_genomes_project 7 127162308 127164921 + protein_coding processed_transcript MGP_WSBEiJ_T0098519.1 MGP_WSBEiJ_G0037182.1 mouse_genomes_project 7 132928628 132928730 + Gm23783 snRNA snRNA MGP_WSBEiJ_T0084788.1 MGP_WSBEiJ_G0032049.1 mouse_genomes_project 7 123170336 123187395 - MGP_WSBEiJ_P0084788 Umod protein_coding protein_coding MGP_WSBEiJ_T0084385.1 MGP_WSBEiJ_G0031925.1 mouse_genomes_project 7 110018783 110023038 - MGP_WSBEiJ_P0084385 Olfr710 protein_coding protein_coding MGP_WSBEiJ_T0084017.1 MGP_WSBEiJ_G0031736.1 mouse_genomes_project 7 104646231 104651644 - MGP_WSBEiJ_P0084017 Tomt protein_coding protein_coding MGP_WSBEiJ_T0084019.1 MGP_WSBEiJ_G0031736.1 mouse_genomes_project 7 104647676 104654218 - MGP_WSBEiJ_P0084019 Tomt protein_coding protein_coding MGP_WSBEiJ_T0099713.1 MGP_WSBEiJ_G0038376.1 mouse_genomes_project 7 45438070 45438153 - Snord32a snoRNA snoRNA MGP_WSBEiJ_T0082229.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702839 44706512 + MGP_WSBEiJ_P0082229 Josd2 protein_coding protein_coding MGP_WSBEiJ_T0082230.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702865 44705038 + Josd2 protein_coding retained_intron MGP_WSBEiJ_T0082231.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702881 44706509 + MGP_WSBEiJ_P0082231 Josd2 protein_coding protein_coding MGP_WSBEiJ_T0082232.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702882 44706511 + MGP_WSBEiJ_P0082232 Josd2 protein_coding protein_coding MGP_WSBEiJ_T0082233.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702895 44706396 + MGP_WSBEiJ_P0082233 Josd2 protein_coding protein_coding MGP_WSBEiJ_T0082234.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702898 44706522 + MGP_WSBEiJ_P0082234 Josd2 protein_coding protein_coding MGP_WSBEiJ_T0082235.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702902 44704172 + Josd2 protein_coding retained_intron MGP_WSBEiJ_T0082236.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702904 44706508 + MGP_WSBEiJ_P0082236 Josd2 protein_coding protein_coding MGP_WSBEiJ_T0082237.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702909 44704294 + Josd2 protein_coding retained_intron MGP_WSBEiJ_T0082238.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702931 44706481 + MGP_WSBEiJ_P0082238 Josd2 protein_coding protein_coding MGP_WSBEiJ_T0082239.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702935 44704209 + Josd2 protein_coding retained_intron MGP_WSBEiJ_T0082240.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702944 44706036 + MGP_WSBEiJ_P0082240 Josd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082241.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702948 44704708 + Josd2 protein_coding processed_transcript MGP_WSBEiJ_T0082242.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702948 44706511 + MGP_WSBEiJ_P0082242 Josd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082243.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44702953 44706503 + MGP_WSBEiJ_P0082243 Josd2 protein_coding protein_coding MGP_WSBEiJ_T0082244.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44703010 44706512 + Josd2 protein_coding retained_intron MGP_WSBEiJ_T0082245.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44703041 44703830 + Josd2 protein_coding retained_intron MGP_WSBEiJ_T0082246.1 MGP_WSBEiJ_G0031315.1 mouse_genomes_project 7 44703685 44706463 + Josd2 protein_coding processed_transcript MGP_WSBEiJ_T0083435.1 MGP_WSBEiJ_G0031581.1 mouse_genomes_project 7 83200450 83236388 - MGP_WSBEiJ_P0083435 Fsd2 protein_coding protein_coding MGP_WSBEiJ_T0101076.1 MGP_WSBEiJ_G0039533.1 mouse_genomes_project 7 87036912 87037773 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083639.1 MGP_WSBEiJ_G0031657.1 mouse_genomes_project 7 95001961 95034616 - MGP_WSBEiJ_P0083639 Pcf11 protein_coding protein_coding MGP_WSBEiJ_T0083640.1 MGP_WSBEiJ_G0031657.1 mouse_genomes_project 7 95002508 95028227 - MGP_WSBEiJ_P0083640 Pcf11 protein_coding protein_coding MGP_WSBEiJ_T0083641.1 MGP_WSBEiJ_G0031657.1 mouse_genomes_project 7 95005065 95006448 - Pcf11 protein_coding retained_intron MGP_WSBEiJ_T0100964.1 MGP_WSBEiJ_G0039421.1 mouse_genomes_project 7 7875185 7875505 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008870.1 MGP_WSBEiJ_G0007150.1 mouse_genomes_project 7 130222318 130249255 - Gm44875 lincRNA lincRNA MGP_WSBEiJ_T0081496.1 MGP_WSBEiJ_G0031139.1 mouse_genomes_project 7 28701939 28711941 + MGP_WSBEiJ_P0081496 Zfp383 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081497.1 MGP_WSBEiJ_G0031139.1 mouse_genomes_project 7 28702233 28711935 + MGP_WSBEiJ_P0081497 Zfp383 protein_coding protein_coding MGP_WSBEiJ_T0084436.1 MGP_WSBEiJ_G0031969.1 mouse_genomes_project 7 112044245 112045178 - MGP_WSBEiJ_P0084436 Olfr514 protein_coding protein_coding MGP_WSBEiJ_T0005088.1 MGP_WSBEiJ_G0004332.1 mouse_genomes_project 7 23479717 23481280 + 4933430L12Rik antisense antisense MGP_WSBEiJ_T0085254.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130897679 130899789 + MGP_WSBEiJ_P0085254 Doc2a protein_coding protein_coding MGP_WSBEiJ_T0085255.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130897816 130902969 + MGP_WSBEiJ_P0085255 Doc2a protein_coding protein_coding MGP_WSBEiJ_T0085256.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130897901 130899016 + Doc2a protein_coding processed_transcript MGP_WSBEiJ_T0085257.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130897961 130898956 + MGP_WSBEiJ_P0085257 Doc2a protein_coding protein_coding MGP_WSBEiJ_T0085258.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130897989 130901603 + MGP_WSBEiJ_P0085258 Doc2a protein_coding protein_coding MGP_WSBEiJ_T0085259.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130898190 130899100 + MGP_WSBEiJ_P0085259 Doc2a protein_coding protein_coding MGP_WSBEiJ_T0085260.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130898225 130899099 + MGP_WSBEiJ_P0085260 Doc2a protein_coding protein_coding MGP_WSBEiJ_T0085261.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130898518 130900024 + MGP_WSBEiJ_P0085261 Doc2a protein_coding protein_coding MGP_WSBEiJ_T0085262.1 MGP_WSBEiJ_G0032142.1 mouse_genomes_project 7 130899060 130902300 + MGP_WSBEiJ_P0085262 Doc2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083350.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82039694 82050039 - MGP_WSBEiJ_P0083350 Blm protein_coding protein_coding MGP_WSBEiJ_T0083351.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82040189 82126467 - MGP_WSBEiJ_P0083351 Blm protein_coding protein_coding MGP_WSBEiJ_T0083352.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82040288 82126346 - MGP_WSBEiJ_P0083352 Blm protein_coding protein_coding MGP_WSBEiJ_T0083353.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82040434 82042545 - Blm protein_coding processed_transcript MGP_WSBEiJ_T0083354.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82040589 82044426 - Blm protein_coding retained_intron MGP_WSBEiJ_T0083355.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82040617 82045997 - MGP_WSBEiJ_P0083355 Blm protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083356.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82049931 82052644 - MGP_WSBEiJ_P0083356 Blm protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083357.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82054392 82103784 - Blm protein_coding retained_intron MGP_WSBEiJ_T0083358.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82054418 82056926 - Blm protein_coding retained_intron MGP_WSBEiJ_T0083359.1 MGP_WSBEiJ_G0031566.1 mouse_genomes_project 7 82061174 82070313 - Blm protein_coding retained_intron MGP_WSBEiJ_T0010746.1 MGP_WSBEiJ_G0008903.1 mouse_genomes_project 7 140049082 140049204 + Mir1962 miRNA miRNA MGP_WSBEiJ_T0084042.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104826345 104845265 + MGP_WSBEiJ_P0084042 Xndc1 protein_coding protein_coding MGP_WSBEiJ_T0084043.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104826354 104841789 + Xndc1 protein_coding retained_intron MGP_WSBEiJ_T0084044.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104826356 104831382 + Xndc1 protein_coding processed_transcript MGP_WSBEiJ_T0084045.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104826429 104839388 + MGP_WSBEiJ_P0084045 Xndc1 protein_coding protein_coding MGP_WSBEiJ_T0084048.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104826594 104844584 + MGP_WSBEiJ_P0084048 Xndc1 protein_coding protein_coding MGP_WSBEiJ_T0084052.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104837496 104840760 + Xndc1 protein_coding retained_intron MGP_WSBEiJ_T0084053.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104840277 104845268 + MGP_WSBEiJ_P0084053 Xndc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084054.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104842560 104844094 + Xndc1 protein_coding processed_transcript MGP_WSBEiJ_T0084055.1 MGP_WSBEiJ_G0031742.1 mouse_genomes_project 7 104842563 104844024 + Xndc1 protein_coding retained_intron MGP_WSBEiJ_T0080767.1 MGP_WSBEiJ_G0030945.1 mouse_genomes_project 7 17833931 17843148 - MGP_WSBEiJ_P0080767 Ceacam16 protein_coding protein_coding MGP_WSBEiJ_T0081977.1 MGP_WSBEiJ_G0031240.1 mouse_genomes_project 7 34939023 34948147 - MGP_WSBEiJ_P0081977 Nudt19 protein_coding protein_coding MGP_WSBEiJ_T0081978.1 MGP_WSBEiJ_G0031240.1 mouse_genomes_project 7 34939359 34947046 - Nudt19 protein_coding processed_transcript MGP_WSBEiJ_T0081979.1 MGP_WSBEiJ_G0031240.1 mouse_genomes_project 7 34939814 34943882 - Nudt19 protein_coding retained_intron MGP_WSBEiJ_T0099736.1 MGP_WSBEiJ_G0038399.1 mouse_genomes_project 7 102041803 102041951 - Snord15a snoRNA snoRNA MGP_WSBEiJ_T0085850.1 MGP_WSBEiJ_G0032259.1 mouse_genomes_project 7 138048283 138083695 + MGP_WSBEiJ_P0085850 Edrf1 protein_coding protein_coding MGP_WSBEiJ_T0085851.1 MGP_WSBEiJ_G0032259.1 mouse_genomes_project 7 138048433 138082903 + MGP_WSBEiJ_P0085851 Edrf1 protein_coding protein_coding MGP_WSBEiJ_T0085852.1 MGP_WSBEiJ_G0032259.1 mouse_genomes_project 7 138048601 138050079 + Edrf1 protein_coding retained_intron MGP_WSBEiJ_T0085853.1 MGP_WSBEiJ_G0032259.1 mouse_genomes_project 7 138067834 138072611 + MGP_WSBEiJ_P0085853 Edrf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085854.1 MGP_WSBEiJ_G0032259.1 mouse_genomes_project 7 138076655 138082653 + MGP_WSBEiJ_P0085854 Edrf1 protein_coding protein_coding MGP_WSBEiJ_T0085855.1 MGP_WSBEiJ_G0032259.1 mouse_genomes_project 7 138077935 138082194 + Edrf1 protein_coding retained_intron MGP_WSBEiJ_T0084748.1 MGP_WSBEiJ_G0032040.1 mouse_genomes_project 7 122265107 122352980 + MGP_WSBEiJ_P0084748 Tmc5 protein_coding protein_coding MGP_WSBEiJ_T0084749.1 MGP_WSBEiJ_G0032040.1 mouse_genomes_project 7 122265107 122352981 + MGP_WSBEiJ_P0084749 Tmc5 protein_coding protein_coding MGP_WSBEiJ_T0084750.1 MGP_WSBEiJ_G0032040.1 mouse_genomes_project 7 122269096 122352981 + MGP_WSBEiJ_P0084750 Tmc5 protein_coding protein_coding MGP_WSBEiJ_T0084751.1 MGP_WSBEiJ_G0032040.1 mouse_genomes_project 7 122306523 122352981 + MGP_WSBEiJ_P0084751 Tmc5 protein_coding protein_coding MGP_WSBEiJ_T0080759.1 MGP_WSBEiJ_G0030943.1 mouse_genomes_project 7 17783536 17786196 - MGP_WSBEiJ_P0080759 Bcl3 protein_coding protein_coding MGP_WSBEiJ_T0080760.1 MGP_WSBEiJ_G0030943.1 mouse_genomes_project 7 17783536 17797803 - MGP_WSBEiJ_P0080760 Bcl3 protein_coding protein_coding MGP_WSBEiJ_T0080761.1 MGP_WSBEiJ_G0030943.1 mouse_genomes_project 7 17786191 17786964 - Bcl3 protein_coding retained_intron MGP_WSBEiJ_T0080762.1 MGP_WSBEiJ_G0030943.1 mouse_genomes_project 7 17786423 17787908 - Bcl3 protein_coding retained_intron MGP_WSBEiJ_T0080763.1 MGP_WSBEiJ_G0030943.1 mouse_genomes_project 7 17786569 17791067 - Bcl3 protein_coding processed_transcript MGP_WSBEiJ_T0080764.1 MGP_WSBEiJ_G0030943.1 mouse_genomes_project 7 17786660 17797190 - MGP_WSBEiJ_P0080764 Bcl3 protein_coding protein_coding MGP_WSBEiJ_T0080765.1 MGP_WSBEiJ_G0030943.1 mouse_genomes_project 7 17787469 17797803 - Bcl3 protein_coding processed_transcript MGP_WSBEiJ_T0083403.1 MGP_WSBEiJ_G0031573.1 mouse_genomes_project 7 82628282 82682484 + MGP_WSBEiJ_P0083403 Zfp592 protein_coding protein_coding MGP_WSBEiJ_T0083404.1 MGP_WSBEiJ_G0031573.1 mouse_genomes_project 7 82660579 82661753 + Zfp592 protein_coding processed_transcript MGP_WSBEiJ_T0083405.1 MGP_WSBEiJ_G0031573.1 mouse_genomes_project 7 82675148 82675710 + Zfp592 protein_coding retained_intron MGP_WSBEiJ_T0083406.1 MGP_WSBEiJ_G0031573.1 mouse_genomes_project 7 82675424 82678773 + Zfp592 protein_coding retained_intron MGP_WSBEiJ_T0015252.1 MGP_WSBEiJ_G0013382.1 mouse_genomes_project 7 23713475 23714425 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083679.1 MGP_WSBEiJ_G0031667.1 mouse_genomes_project 7 99862507 99870288 + MGP_WSBEiJ_P0083679 Ndufc2 protein_coding protein_coding MGP_WSBEiJ_T0083680.1 MGP_WSBEiJ_G0031667.1 mouse_genomes_project 7 99862607 99869566 + MGP_WSBEiJ_P0083680 Ndufc2 protein_coding protein_coding MGP_WSBEiJ_T0101011.1 MGP_WSBEiJ_G0039468.1 mouse_genomes_project 7 25188049 25195991 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085277.1 MGP_WSBEiJ_G0032144.1 mouse_genomes_project 7 130912098 130915506 + MGP_WSBEiJ_P0085277 Hirip3 protein_coding protein_coding MGP_WSBEiJ_T0085278.1 MGP_WSBEiJ_G0032144.1 mouse_genomes_project 7 130912567 130913533 + Hirip3 protein_coding retained_intron MGP_WSBEiJ_T0085279.1 MGP_WSBEiJ_G0032144.1 mouse_genomes_project 7 130912592 130913854 + Hirip3 protein_coding retained_intron MGP_WSBEiJ_T0085280.1 MGP_WSBEiJ_G0032144.1 mouse_genomes_project 7 130912595 130914300 + Hirip3 protein_coding processed_transcript MGP_WSBEiJ_T0085281.1 MGP_WSBEiJ_G0032144.1 mouse_genomes_project 7 130912609 130913560 + MGP_WSBEiJ_P0085281 Hirip3 protein_coding protein_coding MGP_WSBEiJ_T0085282.1 MGP_WSBEiJ_G0032144.1 mouse_genomes_project 7 130913971 130914657 + Hirip3 protein_coding retained_intron MGP_WSBEiJ_T0085283.1 MGP_WSBEiJ_G0032144.1 mouse_genomes_project 7 130914544 130915047 + Hirip3 protein_coding retained_intron MGP_WSBEiJ_T0008726.1 MGP_WSBEiJ_G0007055.1 mouse_genomes_project 7 45560273 45578621 + lincRNA lincRNA MGP_WSBEiJ_T0008727.1 MGP_WSBEiJ_G0007055.1 mouse_genomes_project 7 45578582 45593453 + lincRNA lincRNA MGP_WSBEiJ_T0084900.1 MGP_WSBEiJ_G0032081.1 mouse_genomes_project 7 125209932 125216154 + MGP_WSBEiJ_P0084900 Hs3st2 protein_coding protein_coding MGP_WSBEiJ_T0084901.1 MGP_WSBEiJ_G0032081.1 mouse_genomes_project 7 125210368 125315006 + MGP_WSBEiJ_P0084901 Hs3st2 protein_coding protein_coding MGP_WSBEiJ_T0083537.1 MGP_WSBEiJ_G0031622.1 mouse_genomes_project 7 88571814 88572807 + MGP_WSBEiJ_P0083537 Olfr299 protein_coding protein_coding MGP_WSBEiJ_T0080125.1 MGP_WSBEiJ_G0030722.1 mouse_genomes_project 7 1707624 1713413 - MGP_WSBEiJ_P0080125 Il11 protein_coding protein_coding MGP_WSBEiJ_T0080126.1 MGP_WSBEiJ_G0030722.1 mouse_genomes_project 7 1708505 1717949 - MGP_WSBEiJ_P0080126 Il11 protein_coding protein_coding MGP_WSBEiJ_T0008667.1 MGP_WSBEiJ_G0007007.1 mouse_genomes_project 7 17552311 17557318 - Gm26890 lincRNA lincRNA MGP_WSBEiJ_T0084171.1 MGP_WSBEiJ_G0031825.1 mouse_genomes_project 7 106717368 106718868 - MGP_WSBEiJ_P0084171 Hbb-y protein_coding protein_coding MGP_WSBEiJ_T0101049.1 MGP_WSBEiJ_G0039506.1 mouse_genomes_project 7 48126735 48742536 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085154.1 MGP_WSBEiJ_G0032128.1 mouse_genomes_project 7 130658830 130661258 - MGP_WSBEiJ_P0085154 Nupr1 protein_coding protein_coding MGP_WSBEiJ_T0085155.1 MGP_WSBEiJ_G0032128.1 mouse_genomes_project 7 130658833 130662590 - Nupr1 protein_coding retained_intron MGP_WSBEiJ_T0085156.1 MGP_WSBEiJ_G0032128.1 mouse_genomes_project 7 130658859 130660926 - MGP_WSBEiJ_P0085156 Nupr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085157.1 MGP_WSBEiJ_G0032128.1 mouse_genomes_project 7 130659023 130661057 - MGP_WSBEiJ_P0085157 Nupr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085158.1 MGP_WSBEiJ_G0032128.1 mouse_genomes_project 7 130660529 130661596 - Nupr1 protein_coding processed_transcript MGP_WSBEiJ_T0085159.1 MGP_WSBEiJ_G0032128.1 mouse_genomes_project 7 130660529 130666216 - Nupr1 protein_coding processed_transcript MGP_WSBEiJ_T0081852.1 MGP_WSBEiJ_G0031214.1 mouse_genomes_project 7 32970954 32973077 - MGP_WSBEiJ_P0081852 Scgb2b24 protein_coding protein_coding MGP_WSBEiJ_T0010672.1 MGP_WSBEiJ_G0008829.1 mouse_genomes_project 7 25707438 25707558 + Mir1191 miRNA miRNA MGP_WSBEiJ_T0100977.1 MGP_WSBEiJ_G0039434.1 mouse_genomes_project 7 9639930 9640543 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084105.1 MGP_WSBEiJ_G0031762.1 mouse_genomes_project 7 105397428 105398409 - MGP_WSBEiJ_P0084105 Olfr553 protein_coding protein_coding MGP_WSBEiJ_T0084264.1 MGP_WSBEiJ_G0031890.1 mouse_genomes_project 7 108229072 108230198 + MGP_WSBEiJ_P0084264 Olfr692 protein_coding protein_coding MGP_WSBEiJ_T0099734.1 MGP_WSBEiJ_G0038397.1 mouse_genomes_project 7 101472443 101472565 + Gm23479 snoRNA snoRNA MGP_WSBEiJ_T0005098.1 MGP_WSBEiJ_G0004338.1 mouse_genomes_project 7 26031529 26037580 - Gm15541 antisense antisense MGP_WSBEiJ_T0080694.1 MGP_WSBEiJ_G0030926.1 mouse_genomes_project 7 17454078 17456570 - MGP_WSBEiJ_P0080694 Bloc1s3 protein_coding protein_coding MGP_WSBEiJ_T0010673.1 MGP_WSBEiJ_G0008830.1 mouse_genomes_project 7 27217242 27217302 - Mir7049 miRNA miRNA MGP_WSBEiJ_T0085486.1 MGP_WSBEiJ_G0032187.1 mouse_genomes_project 7 131774574 131828878 - MGP_WSBEiJ_P0085486 Bcl7c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085487.1 MGP_WSBEiJ_G0032187.1 mouse_genomes_project 7 131779914 131828732 - MGP_WSBEiJ_P0085487 Bcl7c protein_coding protein_coding MGP_WSBEiJ_T0085488.1 MGP_WSBEiJ_G0032187.1 mouse_genomes_project 7 131780070 131828555 - MGP_WSBEiJ_P0085488 Bcl7c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085489.1 MGP_WSBEiJ_G0032187.1 mouse_genomes_project 7 131825065 131828620 - MGP_WSBEiJ_P0085489 Bcl7c protein_coding protein_coding MGP_WSBEiJ_T0085490.1 MGP_WSBEiJ_G0032187.1 mouse_genomes_project 7 131825084 131827401 - MGP_WSBEiJ_P0085490 Bcl7c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085491.1 MGP_WSBEiJ_G0032187.1 mouse_genomes_project 7 131825890 131828168 - Bcl7c protein_coding processed_transcript MGP_WSBEiJ_T0002177.1 MGP_WSBEiJ_G0002096.1 mouse_genomes_project 7 43367756 43367881 + TEC TEC MGP_WSBEiJ_T0081553.1 MGP_WSBEiJ_G0031157.1 mouse_genomes_project 7 29101050 29111211 + MGP_WSBEiJ_P0081553 protein_coding protein_coding MGP_WSBEiJ_T0008666.1 MGP_WSBEiJ_G0007006.1 mouse_genomes_project 7 17321777 17332271 - Gm26852 lincRNA lincRNA MGP_WSBEiJ_T0008908.1 MGP_WSBEiJ_G0007175.1 mouse_genomes_project 7 144646785 144647820 - Gm2044 lincRNA lincRNA MGP_WSBEiJ_T0084741.1 MGP_WSBEiJ_G0032038.1 mouse_genomes_project 7 122172018 122195623 - MGP_WSBEiJ_P0084741 Coq7 protein_coding protein_coding MGP_WSBEiJ_T0084742.1 MGP_WSBEiJ_G0032038.1 mouse_genomes_project 7 122187349 122195678 - MGP_WSBEiJ_P0084742 Coq7 protein_coding protein_coding MGP_WSBEiJ_T0084743.1 MGP_WSBEiJ_G0032038.1 mouse_genomes_project 7 122189090 122195636 - Coq7 protein_coding retained_intron MGP_WSBEiJ_T0083578.1 MGP_WSBEiJ_G0031641.1 mouse_genomes_project 7 91839428 91840456 - MGP_WSBEiJ_P0083578 protein_coding protein_coding MGP_WSBEiJ_T0081605.1 MGP_WSBEiJ_G0031169.1 mouse_genomes_project 7 29281950 29284644 + MGP_WSBEiJ_P0081605 Nphs1 protein_coding protein_coding MGP_WSBEiJ_T0081606.1 MGP_WSBEiJ_G0031169.1 mouse_genomes_project 7 29283359 29316628 + MGP_WSBEiJ_P0081606 Nphs1 protein_coding protein_coding MGP_WSBEiJ_T0081607.1 MGP_WSBEiJ_G0031169.1 mouse_genomes_project 7 29299013 29310962 + Nphs1 protein_coding retained_intron MGP_WSBEiJ_T0081608.1 MGP_WSBEiJ_G0031169.1 mouse_genomes_project 7 29304990 29316286 + MGP_WSBEiJ_P0081608 Nphs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081609.1 MGP_WSBEiJ_G0031169.1 mouse_genomes_project 7 29315659 29316393 + Nphs1 protein_coding retained_intron MGP_WSBEiJ_T0008816.1 MGP_WSBEiJ_G0007115.1 mouse_genomes_project 7 92372662 92377925 - 2310010J17Rik lincRNA lincRNA MGP_WSBEiJ_T0080618.1 MGP_WSBEiJ_G0030904.1 mouse_genomes_project 7 17005846 17009801 + MGP_WSBEiJ_P0080618 Six5 protein_coding protein_coding MGP_WSBEiJ_T0002227.1 MGP_WSBEiJ_G0002145.1 mouse_genomes_project 7 80377684 80379317 - TEC TEC MGP_WSBEiJ_T0011479.1 MGP_WSBEiJ_G0009636.1 mouse_genomes_project 7 13513752 13514002 + Gm24576 misc_RNA misc_RNA MGP_WSBEiJ_T0083577.1 MGP_WSBEiJ_G0031640.1 mouse_genomes_project 7 91715672 91725472 - MGP_WSBEiJ_P0083577 Prss23 protein_coding protein_coding MGP_WSBEiJ_T0083943.1 MGP_WSBEiJ_G0031727.1 mouse_genomes_project 7 104029565 104063176 + MGP_WSBEiJ_P0083943 Stard10 protein_coding protein_coding MGP_WSBEiJ_T0083944.1 MGP_WSBEiJ_G0031727.1 mouse_genomes_project 7 104035892 104062687 + MGP_WSBEiJ_P0083944 Stard10 protein_coding protein_coding MGP_WSBEiJ_T0083945.1 MGP_WSBEiJ_G0031727.1 mouse_genomes_project 7 104036158 104059837 + MGP_WSBEiJ_P0083945 Stard10 protein_coding protein_coding MGP_WSBEiJ_T0083946.1 MGP_WSBEiJ_G0031727.1 mouse_genomes_project 7 104036383 104062739 + MGP_WSBEiJ_P0083946 Stard10 protein_coding protein_coding MGP_WSBEiJ_T0083947.1 MGP_WSBEiJ_G0031727.1 mouse_genomes_project 7 104036455 104062858 + MGP_WSBEiJ_P0083947 Stard10 protein_coding protein_coding MGP_WSBEiJ_T0083948.1 MGP_WSBEiJ_G0031727.1 mouse_genomes_project 7 104036640 104060882 + MGP_WSBEiJ_P0083948 Stard10 protein_coding protein_coding MGP_WSBEiJ_T0083949.1 MGP_WSBEiJ_G0031727.1 mouse_genomes_project 7 104059059 104062687 + MGP_WSBEiJ_P0083949 Stard10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005186.1 MGP_WSBEiJ_G0004401.1 mouse_genomes_project 7 107142920 107143628 - antisense antisense MGP_WSBEiJ_T0082710.1 MGP_WSBEiJ_G0031440.1 mouse_genomes_project 7 49168546 49181367 - MGP_WSBEiJ_P0082710 Mrgprb1 protein_coding protein_coding MGP_WSBEiJ_T0082711.1 MGP_WSBEiJ_G0031440.1 mouse_genomes_project 7 49171333 49181320 - MGP_WSBEiJ_P0082711 Mrgprb1 protein_coding protein_coding MGP_WSBEiJ_T0082712.1 MGP_WSBEiJ_G0031440.1 mouse_genomes_project 7 49171563 49181271 - MGP_WSBEiJ_P0082712 Mrgprb1 protein_coding protein_coding MGP_WSBEiJ_T0015307.1 MGP_WSBEiJ_G0013437.1 mouse_genomes_project 7 48972643 48973280 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002176.1 MGP_WSBEiJ_G0002095.1 mouse_genomes_project 7 40496882 40498412 - TEC TEC MGP_WSBEiJ_T0015388.1 MGP_WSBEiJ_G0013518.1 mouse_genomes_project 7 110296627 110298070 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080568.1 MGP_WSBEiJ_G0030893.1 mouse_genomes_project 7 16774599 16775112 - Ccdc61 protein_coding retained_intron MGP_WSBEiJ_T0080569.1 MGP_WSBEiJ_G0030893.1 mouse_genomes_project 7 16774599 16793946 - MGP_WSBEiJ_P0080569 Ccdc61 protein_coding protein_coding MGP_WSBEiJ_T0080570.1 MGP_WSBEiJ_G0030893.1 mouse_genomes_project 7 16774600 16793929 - MGP_WSBEiJ_P0080570 Ccdc61 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080571.1 MGP_WSBEiJ_G0030893.1 mouse_genomes_project 7 16774600 16776263 - MGP_WSBEiJ_P0080571 Ccdc61 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080572.1 MGP_WSBEiJ_G0030893.1 mouse_genomes_project 7 16774721 16777676 - MGP_WSBEiJ_P0080572 Ccdc61 protein_coding protein_coding MGP_WSBEiJ_T0080573.1 MGP_WSBEiJ_G0030893.1 mouse_genomes_project 7 16775363 16776069 - Ccdc61 protein_coding retained_intron MGP_WSBEiJ_T0080574.1 MGP_WSBEiJ_G0030893.1 mouse_genomes_project 7 16783220 16793929 - MGP_WSBEiJ_P0080574 Ccdc61 protein_coding protein_coding MGP_WSBEiJ_T0080575.1 MGP_WSBEiJ_G0030893.1 mouse_genomes_project 7 16784653 16793920 - MGP_WSBEiJ_P0080575 Ccdc61 protein_coding protein_coding MGP_WSBEiJ_T0008741.1 MGP_WSBEiJ_G0007067.1 mouse_genomes_project 7 66708966 66712153 + 1810008I18Rik lincRNA lincRNA MGP_WSBEiJ_T0008742.1 MGP_WSBEiJ_G0007067.1 mouse_genomes_project 7 66709885 66712316 + 1810008I18Rik lincRNA lincRNA MGP_WSBEiJ_T0005138.1 MGP_WSBEiJ_G0004369.1 mouse_genomes_project 7 51281564 51338297 - Nell1os antisense antisense MGP_WSBEiJ_T0005139.1 MGP_WSBEiJ_G0004369.1 mouse_genomes_project 7 51311331 51338384 - Nell1os antisense antisense MGP_WSBEiJ_T0005140.1 MGP_WSBEiJ_G0004369.1 mouse_genomes_project 7 51325859 51337087 - Nell1os antisense antisense MGP_WSBEiJ_T0085768.1 MGP_WSBEiJ_G0032239.1 mouse_genomes_project 7 135650222 135653358 + MGP_WSBEiJ_P0085768 Fam24a protein_coding protein_coding MGP_WSBEiJ_T0085902.1 MGP_WSBEiJ_G0032269.1 mouse_genomes_project 7 139743467 139747771 + MGP_WSBEiJ_P0085902 Nps protein_coding protein_coding MGP_WSBEiJ_T0015208.1 MGP_WSBEiJ_G0013338.1 mouse_genomes_project 7 1267726 1267904 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085406.1 MGP_WSBEiJ_G0032172.1 mouse_genomes_project 7 131482893 131519249 - MGP_WSBEiJ_P0085406 protein_coding protein_coding MGP_WSBEiJ_T0085407.1 MGP_WSBEiJ_G0032172.1 mouse_genomes_project 7 131484557 131519211 - MGP_WSBEiJ_P0085407 protein_coding protein_coding MGP_WSBEiJ_T0085408.1 MGP_WSBEiJ_G0032172.1 mouse_genomes_project 7 131484608 131519214 - protein_coding retained_intron MGP_WSBEiJ_T0079916.1 MGP_WSBEiJ_G0030689.1 mouse_genomes_project 7 493902 503473 - MGP_WSBEiJ_P0079916 Tfpt protein_coding protein_coding MGP_WSBEiJ_T0079917.1 MGP_WSBEiJ_G0030689.1 mouse_genomes_project 7 493902 503518 - MGP_WSBEiJ_P0079917 Tfpt protein_coding protein_coding MGP_WSBEiJ_T0079918.1 MGP_WSBEiJ_G0030689.1 mouse_genomes_project 7 493913 502675 - MGP_WSBEiJ_P0079918 Tfpt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079919.1 MGP_WSBEiJ_G0030689.1 mouse_genomes_project 7 494357 503168 - Tfpt protein_coding processed_transcript MGP_WSBEiJ_T0079920.1 MGP_WSBEiJ_G0030689.1 mouse_genomes_project 7 494373 503416 - MGP_WSBEiJ_P0079920 Tfpt protein_coding protein_coding MGP_WSBEiJ_T0079921.1 MGP_WSBEiJ_G0030689.1 mouse_genomes_project 7 494552 503448 - MGP_WSBEiJ_P0079921 Tfpt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079922.1 MGP_WSBEiJ_G0030689.1 mouse_genomes_project 7 498174 503168 - MGP_WSBEiJ_P0079922 Tfpt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084256.1 MGP_WSBEiJ_G0031882.1 mouse_genomes_project 7 108000252 108001755 - MGP_WSBEiJ_P0084256 Olfr683 protein_coding protein_coding MGP_WSBEiJ_T0083585.1 MGP_WSBEiJ_G0031643.1 mouse_genomes_project 7 92080554 92122444 - MGP_WSBEiJ_P0083585 Ccdc81 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083586.1 MGP_WSBEiJ_G0031643.1 mouse_genomes_project 7 92080795 92122433 - MGP_WSBEiJ_P0083586 Ccdc81 protein_coding protein_coding MGP_WSBEiJ_T0083008.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 67800774 67932080 + Adamts17 protein_coding retained_intron MGP_WSBEiJ_T0083009.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 67800774 67988366 + Adamts17 protein_coding retained_intron MGP_WSBEiJ_T0083010.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 67800774 68120067 + MGP_WSBEiJ_P0083010 Adamts17 protein_coding protein_coding MGP_WSBEiJ_T0083011.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 67800852 68120071 + MGP_WSBEiJ_P0083011 Adamts17 protein_coding protein_coding MGP_WSBEiJ_T0083012.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 67800875 67815075 + MGP_WSBEiJ_P0083012 Adamts17 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083013.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 67803298 68024072 + Adamts17 protein_coding processed_transcript MGP_WSBEiJ_T0083014.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 67810786 67832978 + Adamts17 protein_coding processed_transcript MGP_WSBEiJ_T0083015.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 67874603 67932080 + Adamts17 protein_coding processed_transcript MGP_WSBEiJ_T0083016.1 MGP_WSBEiJ_G0031506.1 mouse_genomes_project 7 68008549 68043443 + MGP_WSBEiJ_P0083016 Adamts17 protein_coding protein_coding MGP_WSBEiJ_T0008884.1 MGP_WSBEiJ_G0007157.1 mouse_genomes_project 7 131364118 131366458 + Gm44728 lincRNA lincRNA MGP_WSBEiJ_T0008885.1 MGP_WSBEiJ_G0007157.1 mouse_genomes_project 7 131364604 131366870 + Gm44728 lincRNA lincRNA MGP_WSBEiJ_T0082151.1 MGP_WSBEiJ_G0031284.1 mouse_genomes_project 7 43810115 43826119 + MGP_WSBEiJ_P0082151 Ceacam18 protein_coding protein_coding MGP_WSBEiJ_T0082589.1 MGP_WSBEiJ_G0031403.1 mouse_genomes_project 7 46203012 46243285 - MGP_WSBEiJ_P0082589 Grin2d protein_coding protein_coding MGP_WSBEiJ_T0082590.1 MGP_WSBEiJ_G0031403.1 mouse_genomes_project 7 46242531 46247821 - MGP_WSBEiJ_P0082590 Grin2d protein_coding protein_coding MGP_WSBEiJ_T0005083.1 MGP_WSBEiJ_G0004327.1 mouse_genomes_project 7 17791623 17793696 + Gm16174 antisense antisense MGP_WSBEiJ_T0085885.1 MGP_WSBEiJ_G0032265.1 mouse_genomes_project 7 138308555 138657074 - MGP_WSBEiJ_P0085885 Adam12 protein_coding protein_coding MGP_WSBEiJ_T0085886.1 MGP_WSBEiJ_G0032265.1 mouse_genomes_project 7 138311553 138385752 - MGP_WSBEiJ_P0085886 Adam12 protein_coding protein_coding MGP_WSBEiJ_T0085887.1 MGP_WSBEiJ_G0032265.1 mouse_genomes_project 7 138401496 138663957 - MGP_WSBEiJ_P0085887 Adam12 protein_coding protein_coding MGP_WSBEiJ_T0085888.1 MGP_WSBEiJ_G0032265.1 mouse_genomes_project 7 138407433 138664098 - MGP_WSBEiJ_P0085888 Adam12 protein_coding protein_coding MGP_WSBEiJ_T0085889.1 MGP_WSBEiJ_G0032265.1 mouse_genomes_project 7 138595337 138597367 - Adam12 protein_coding retained_intron MGP_WSBEiJ_T0085890.1 MGP_WSBEiJ_G0032265.1 mouse_genomes_project 7 138619639 138657349 - Adam12 protein_coding processed_transcript MGP_WSBEiJ_T0083645.1 MGP_WSBEiJ_G0031659.1 mouse_genomes_project 7 95223728 95242283 - MGP_WSBEiJ_P0083645 Ddias protein_coding protein_coding MGP_WSBEiJ_T0080785.1 MGP_WSBEiJ_G0030956.1 mouse_genomes_project 7 21588076 21603096 - MGP_WSBEiJ_P0080785 Vmn1r176 protein_coding protein_coding MGP_WSBEiJ_T0082720.1 MGP_WSBEiJ_G0031445.1 mouse_genomes_project 7 49521171 49538818 - MGP_WSBEiJ_P0082720 Csrp3 protein_coding protein_coding MGP_WSBEiJ_T0082721.1 MGP_WSBEiJ_G0031445.1 mouse_genomes_project 7 49521171 49534437 - MGP_WSBEiJ_P0082721 Csrp3 protein_coding protein_coding MGP_WSBEiJ_T0080204.1 MGP_WSBEiJ_G0030758.1 mouse_genomes_project 7 3370559 3388988 + MGP_WSBEiJ_P0080204 Zscan5b protein_coding protein_coding MGP_WSBEiJ_T0080205.1 MGP_WSBEiJ_G0030758.1 mouse_genomes_project 7 3370576 3378954 + MGP_WSBEiJ_P0080205 Zscan5b protein_coding protein_coding MGP_WSBEiJ_T0080206.1 MGP_WSBEiJ_G0030758.1 mouse_genomes_project 7 3377728 3388754 + MGP_WSBEiJ_P0080206 Zscan5b protein_coding protein_coding MGP_WSBEiJ_T0084152.1 MGP_WSBEiJ_G0031806.1 mouse_genomes_project 7 106366252 106367194 + MGP_WSBEiJ_P0084152 Olfr615 protein_coding protein_coding MGP_WSBEiJ_T0086056.1 MGP_WSBEiJ_G0032327.1 mouse_genomes_project 7 145529671 145540911 + MGP_WSBEiJ_P0086056 Cyp2e1 protein_coding protein_coding MGP_WSBEiJ_T0015272.1 MGP_WSBEiJ_G0013402.1 mouse_genomes_project 7 33675014 33675430 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080887.1 MGP_WSBEiJ_G0030988.1 mouse_genomes_project 7 22825334 22829396 - MGP_WSBEiJ_P0080887 Tex101 protein_coding protein_coding MGP_WSBEiJ_T0080942.1 MGP_WSBEiJ_G0031000.1 mouse_genomes_project 7 23249415 23317175 - MGP_WSBEiJ_P0080942 Grik5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080943.1 MGP_WSBEiJ_G0031000.1 mouse_genomes_project 7 23249415 23317420 - MGP_WSBEiJ_P0080943 Grik5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080944.1 MGP_WSBEiJ_G0031000.1 mouse_genomes_project 7 23249415 23317366 - MGP_WSBEiJ_P0080944 Grik5 protein_coding protein_coding MGP_WSBEiJ_T0080945.1 MGP_WSBEiJ_G0031000.1 mouse_genomes_project 7 23288640 23301869 - Grik5 protein_coding retained_intron MGP_WSBEiJ_T0080946.1 MGP_WSBEiJ_G0031000.1 mouse_genomes_project 7 23302432 23308504 - Grik5 protein_coding retained_intron MGP_WSBEiJ_T0080947.1 MGP_WSBEiJ_G0031000.1 mouse_genomes_project 7 23302619 23303317 - Grik5 protein_coding retained_intron MGP_WSBEiJ_T0080948.1 MGP_WSBEiJ_G0031000.1 mouse_genomes_project 7 23311872 23317384 - Grik5 protein_coding processed_transcript MGP_WSBEiJ_T0080189.1 MGP_WSBEiJ_G0030752.1 mouse_genomes_project 7 2336588 2347036 + MGP_WSBEiJ_P0080189 Gm5065 protein_coding protein_coding MGP_WSBEiJ_T0081515.1 MGP_WSBEiJ_G0031146.1 mouse_genomes_project 7 28878881 28894526 - MGP_WSBEiJ_P0081515 Zfp566 protein_coding protein_coding MGP_WSBEiJ_T0081516.1 MGP_WSBEiJ_G0031146.1 mouse_genomes_project 7 28883906 28894462 - Zfp566 protein_coding retained_intron MGP_WSBEiJ_T0084918.1 MGP_WSBEiJ_G0032087.1 mouse_genomes_project 7 125868743 125900507 - Ears2 protein_coding retained_intron MGP_WSBEiJ_T0084919.1 MGP_WSBEiJ_G0032087.1 mouse_genomes_project 7 125870347 125900566 - Ears2 protein_coding retained_intron MGP_WSBEiJ_T0084920.1 MGP_WSBEiJ_G0032087.1 mouse_genomes_project 7 125870347 125900760 - MGP_WSBEiJ_P0084920 Ears2 protein_coding protein_coding MGP_WSBEiJ_T0005227.1 MGP_WSBEiJ_G0004431.1 mouse_genomes_project 7 137031516 137034023 - Gm15582 antisense antisense MGP_WSBEiJ_T0002268.1 MGP_WSBEiJ_G0002186.1 mouse_genomes_project 7 131923233 131925918 - TEC TEC MGP_WSBEiJ_T0081705.1 MGP_WSBEiJ_G0031189.1 mouse_genomes_project 7 29576909 29580063 - MGP_WSBEiJ_P0081705 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081706.1 MGP_WSBEiJ_G0031189.1 mouse_genomes_project 7 29576914 29592289 - MGP_WSBEiJ_P0081706 protein_coding protein_coding MGP_WSBEiJ_T0081707.1 MGP_WSBEiJ_G0031189.1 mouse_genomes_project 7 29577021 29592311 - MGP_WSBEiJ_P0081707 protein_coding protein_coding MGP_WSBEiJ_T0099711.1 MGP_WSBEiJ_G0038374.1 mouse_genomes_project 7 45435469 45435539 - Snord34 snoRNA snoRNA MGP_WSBEiJ_T0081101.1 MGP_WSBEiJ_G0031041.1 mouse_genomes_project 7 25291596 25319804 + MGP_WSBEiJ_P0081101 Cyp2a4 protein_coding protein_coding MGP_WSBEiJ_T0085539.1 MGP_WSBEiJ_G0032197.1 mouse_genomes_project 7 131992342 132005927 - MGP_WSBEiJ_P0085539 Zfp668 protein_coding protein_coding MGP_WSBEiJ_T0085540.1 MGP_WSBEiJ_G0032197.1 mouse_genomes_project 7 131995012 132005879 - MGP_WSBEiJ_P0085540 Zfp668 protein_coding protein_coding MGP_WSBEiJ_T0085541.1 MGP_WSBEiJ_G0032197.1 mouse_genomes_project 7 131995288 132004745 - MGP_WSBEiJ_P0085541 Zfp668 protein_coding protein_coding MGP_WSBEiJ_T0085542.1 MGP_WSBEiJ_G0032197.1 mouse_genomes_project 7 131995288 132005876 - MGP_WSBEiJ_P0085542 Zfp668 protein_coding protein_coding MGP_WSBEiJ_T0085543.1 MGP_WSBEiJ_G0032197.1 mouse_genomes_project 7 131997336 132004756 - MGP_WSBEiJ_P0085543 Zfp668 protein_coding protein_coding MGP_WSBEiJ_T0085544.1 MGP_WSBEiJ_G0032197.1 mouse_genomes_project 7 132002882 132005233 - Zfp668 protein_coding processed_transcript MGP_WSBEiJ_T0100963.1 MGP_WSBEiJ_G0039420.1 mouse_genomes_project 7 7830875 7831249 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083633.1 MGP_WSBEiJ_G0031656.1 mouse_genomes_project 7 94943810 94995555 - MGP_WSBEiJ_P0083633 Ankrd42 protein_coding protein_coding MGP_WSBEiJ_T0083634.1 MGP_WSBEiJ_G0031656.1 mouse_genomes_project 7 94946270 94995595 - MGP_WSBEiJ_P0083634 Ankrd42 protein_coding protein_coding MGP_WSBEiJ_T0083635.1 MGP_WSBEiJ_G0031656.1 mouse_genomes_project 7 94946286 94995589 - MGP_WSBEiJ_P0083635 Ankrd42 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083636.1 MGP_WSBEiJ_G0031656.1 mouse_genomes_project 7 94962508 94968482 - Ankrd42 protein_coding retained_intron MGP_WSBEiJ_T0083637.1 MGP_WSBEiJ_G0031656.1 mouse_genomes_project 7 94967284 94995488 - Ankrd42 protein_coding retained_intron MGP_WSBEiJ_T0083638.1 MGP_WSBEiJ_G0031656.1 mouse_genomes_project 7 94967536 94995583 - Ankrd42 protein_coding processed_transcript MGP_WSBEiJ_T0101018.1 MGP_WSBEiJ_G0039475.1 mouse_genomes_project 7 30333107 30334363 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080282.1 MGP_WSBEiJ_G0030802.1 mouse_genomes_project 7 9962036 9994948 - MGP_WSBEiJ_P0080282 protein_coding protein_coding MGP_WSBEiJ_T0083576.1 MGP_WSBEiJ_G0031639.1 mouse_genomes_project 7 91607247 91612992 + MGP_WSBEiJ_P0083576 Fzd4 protein_coding protein_coding MGP_WSBEiJ_T0082192.1 MGP_WSBEiJ_G0031307.1 mouse_genomes_project 7 44469121 44471573 + protein_coding processed_transcript MGP_WSBEiJ_T0082193.1 MGP_WSBEiJ_G0031307.1 mouse_genomes_project 7 44469131 44470987 + protein_coding processed_transcript MGP_WSBEiJ_T0082194.1 MGP_WSBEiJ_G0031307.1 mouse_genomes_project 7 44469134 44472876 + protein_coding processed_transcript MGP_WSBEiJ_T0082195.1 MGP_WSBEiJ_G0031307.1 mouse_genomes_project 7 44469142 44473302 + protein_coding processed_transcript MGP_WSBEiJ_T0082196.1 MGP_WSBEiJ_G0031307.1 mouse_genomes_project 7 44469152 44473349 + protein_coding processed_transcript MGP_WSBEiJ_T0082198.1 MGP_WSBEiJ_G0031307.1 mouse_genomes_project 7 44472412 44476093 + MGP_WSBEiJ_P0082198 protein_coding protein_coding MGP_WSBEiJ_T0082026.1 MGP_WSBEiJ_G0031248.1 mouse_genomes_project 7 37475898 37537061 - MGP_WSBEiJ_P0082026 Uri1 protein_coding protein_coding MGP_WSBEiJ_T0082027.1 MGP_WSBEiJ_G0031248.1 mouse_genomes_project 7 37475899 37485431 - Uri1 protein_coding processed_transcript MGP_WSBEiJ_T0082028.1 MGP_WSBEiJ_G0031248.1 mouse_genomes_project 7 37476548 37537085 - MGP_WSBEiJ_P0082028 Uri1 protein_coding protein_coding MGP_WSBEiJ_T0082029.1 MGP_WSBEiJ_G0031248.1 mouse_genomes_project 7 37477207 37478435 - MGP_WSBEiJ_P0082029 Uri1 protein_coding protein_coding MGP_WSBEiJ_T0082030.1 MGP_WSBEiJ_G0031248.1 mouse_genomes_project 7 37477270 37541088 - MGP_WSBEiJ_P0082030 Uri1 protein_coding protein_coding MGP_WSBEiJ_T0082031.1 MGP_WSBEiJ_G0031248.1 mouse_genomes_project 7 37481078 37481608 - Uri1 protein_coding processed_transcript MGP_WSBEiJ_T0082032.1 MGP_WSBEiJ_G0031248.1 mouse_genomes_project 7 37485407 37537041 - MGP_WSBEiJ_P0082032 Uri1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085351.1 MGP_WSBEiJ_G0032159.1 mouse_genomes_project 7 131152620 131155249 + MGP_WSBEiJ_P0085351 AI467606 protein_coding protein_coding MGP_WSBEiJ_T0085352.1 MGP_WSBEiJ_G0032159.1 mouse_genomes_project 7 131152685 131154256 + MGP_WSBEiJ_P0085352 AI467606 protein_coding protein_coding MGP_WSBEiJ_T0081421.1 MGP_WSBEiJ_G0031121.1 mouse_genomes_project 7 27889122 27897012 - MGP_WSBEiJ_P0081421 Spred3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081422.1 MGP_WSBEiJ_G0031121.1 mouse_genomes_project 7 27893511 27897331 - Spred3 protein_coding retained_intron MGP_WSBEiJ_T0101026.1 MGP_WSBEiJ_G0039483.1 mouse_genomes_project 7 33176219 33177401 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005105.1 MGP_WSBEiJ_G0004344.1 mouse_genomes_project 7 29346471 29353429 + Arhgap33os antisense antisense MGP_WSBEiJ_T0015311.1 MGP_WSBEiJ_G0013441.1 mouse_genomes_project 7 56138242 56140048 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015347.1 MGP_WSBEiJ_G0013477.1 mouse_genomes_project 7 82874225 82874738 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008796.1 MGP_WSBEiJ_G0007105.1 mouse_genomes_project 7 81029051 81054931 + Gm35040 lincRNA lincRNA MGP_WSBEiJ_T0080221.1 MGP_WSBEiJ_G0030762.1 mouse_genomes_project 7 3525569 3534359 + MGP_WSBEiJ_P0080221 Zfp78 protein_coding protein_coding MGP_WSBEiJ_T0080222.1 MGP_WSBEiJ_G0030762.1 mouse_genomes_project 7 3525569 3534359 + MGP_WSBEiJ_P0080222 Zfp78 protein_coding protein_coding MGP_WSBEiJ_T0101050.1 MGP_WSBEiJ_G0039507.1 mouse_genomes_project 7 48126735 48742535 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081474.1 MGP_WSBEiJ_G0031132.1 mouse_genomes_project 7 28307613 28308953 + MGP_WSBEiJ_P0081474 protein_coding protein_coding MGP_WSBEiJ_T0005101.1 MGP_WSBEiJ_G0004341.1 mouse_genomes_project 7 27883231 27884469 + 1110035H17Rik antisense pseudogene MGP_WSBEiJ_T0005102.1 MGP_WSBEiJ_G0004341.1 mouse_genomes_project 7 27883231 27884471 + 1110035H17Rik antisense antisense MGP_WSBEiJ_T0080171.1 MGP_WSBEiJ_G0030742.1 mouse_genomes_project 7 2003952 2006146 + MGP_WSBEiJ_P0080171 Zfp580 protein_coding protein_coding MGP_WSBEiJ_T0086294.1 MGP_WSBEiJ_G0032375.1 mouse_genomes_project 7 146426224 146503856 + MGP_WSBEiJ_P0086294 Ap2a2 protein_coding protein_coding MGP_WSBEiJ_T0086295.1 MGP_WSBEiJ_G0032375.1 mouse_genomes_project 7 146426259 146473269 + Ap2a2 protein_coding retained_intron MGP_WSBEiJ_T0086296.1 MGP_WSBEiJ_G0032375.1 mouse_genomes_project 7 146426581 146468957 + MGP_WSBEiJ_P0086296 Ap2a2 protein_coding protein_coding MGP_WSBEiJ_T0080017.1 MGP_WSBEiJ_G0030703.1 mouse_genomes_project 7 1149028 1154718 + MGP_WSBEiJ_P0080017 Lilra5 protein_coding protein_coding MGP_WSBEiJ_T0083642.1 MGP_WSBEiJ_G0031658.1 mouse_genomes_project 7 95110109 95200037 + MGP_WSBEiJ_P0083642 Rab30 protein_coding protein_coding MGP_WSBEiJ_T0083643.1 MGP_WSBEiJ_G0031658.1 mouse_genomes_project 7 95182899 95199567 + MGP_WSBEiJ_P0083643 Rab30 protein_coding protein_coding MGP_WSBEiJ_T0083644.1 MGP_WSBEiJ_G0031658.1 mouse_genomes_project 7 95182914 95199564 + MGP_WSBEiJ_P0083644 Rab30 protein_coding protein_coding MGP_WSBEiJ_T0083489.1 MGP_WSBEiJ_G0031598.1 mouse_genomes_project 7 85413586 85423945 + MGP_WSBEiJ_P0083489 Stard5 protein_coding protein_coding MGP_WSBEiJ_T0083490.1 MGP_WSBEiJ_G0031598.1 mouse_genomes_project 7 85413627 85415099 + Stard5 protein_coding retained_intron MGP_WSBEiJ_T0083491.1 MGP_WSBEiJ_G0031598.1 mouse_genomes_project 7 85413627 85434745 + MGP_WSBEiJ_P0083491 Stard5 protein_coding protein_coding MGP_WSBEiJ_T0083492.1 MGP_WSBEiJ_G0031598.1 mouse_genomes_project 7 85413643 85419704 + Stard5 protein_coding retained_intron MGP_WSBEiJ_T0083493.1 MGP_WSBEiJ_G0031598.1 mouse_genomes_project 7 85414180 85414983 + Stard5 protein_coding processed_transcript MGP_WSBEiJ_T0082106.1 MGP_WSBEiJ_G0031271.1 mouse_genomes_project 7 43596137 43604462 + MGP_WSBEiJ_P0082106 Gm42419 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083630.1 MGP_WSBEiJ_G0031655.1 mouse_genomes_project 7 94921760 94925332 + Ccdc90b protein_coding processed_transcript MGP_WSBEiJ_T0083631.1 MGP_WSBEiJ_G0031655.1 mouse_genomes_project 7 94921760 94944382 + MGP_WSBEiJ_P0083631 Ccdc90b protein_coding protein_coding MGP_WSBEiJ_T0083632.1 MGP_WSBEiJ_G0031655.1 mouse_genomes_project 7 94921760 94944382 + MGP_WSBEiJ_P0083632 Ccdc90b protein_coding protein_coding MGP_WSBEiJ_T0098466.1 MGP_WSBEiJ_G0037129.1 mouse_genomes_project 7 14622446 14622553 - Gm25815 snRNA snRNA MGP_WSBEiJ_T0084437.1 MGP_WSBEiJ_G0031970.1 mouse_genomes_project 7 112063529 112064556 - MGP_WSBEiJ_P0084437 Olfr516 protein_coding protein_coding MGP_WSBEiJ_T0005214.1 MGP_WSBEiJ_G0004421.1 mouse_genomes_project 7 131678396 131692342 - Gm28198 antisense antisense MGP_WSBEiJ_T0005119.1 MGP_WSBEiJ_G0004355.1 mouse_genomes_project 7 33957501 33964698 + Gm12781 antisense antisense MGP_WSBEiJ_T0080560.1 MGP_WSBEiJ_G0030890.1 mouse_genomes_project 7 16575020 16589414 + MGP_WSBEiJ_P0080560 protein_coding protein_coding MGP_WSBEiJ_T0002178.1 MGP_WSBEiJ_G0002097.1 mouse_genomes_project 7 43616544 43617021 + TEC TEC MGP_WSBEiJ_T0084319.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108533848 108537495 + MGP_WSBEiJ_P0084319 protein_coding protein_coding MGP_WSBEiJ_T0084320.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534240 108535636 + MGP_WSBEiJ_P0084320 protein_coding protein_coding MGP_WSBEiJ_T0084321.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534340 108544761 + MGP_WSBEiJ_P0084321 protein_coding protein_coding MGP_WSBEiJ_T0084323.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534352 108535578 + protein_coding retained_intron MGP_WSBEiJ_T0084324.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534352 108545303 + MGP_WSBEiJ_P0084324 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084325.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534355 108535632 + MGP_WSBEiJ_P0084325 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084326.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534358 108549381 + MGP_WSBEiJ_P0084326 protein_coding protein_coding MGP_WSBEiJ_T0084327.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534359 108537490 + MGP_WSBEiJ_P0084327 protein_coding protein_coding MGP_WSBEiJ_T0084329.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534377 108535542 + protein_coding processed_transcript MGP_WSBEiJ_T0084330.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534378 108535618 + MGP_WSBEiJ_P0084330 protein_coding protein_coding MGP_WSBEiJ_T0084331.1 MGP_WSBEiJ_G0031901.1 mouse_genomes_project 7 108534459 108535076 + protein_coding retained_intron MGP_WSBEiJ_T0085302.1 MGP_WSBEiJ_G0032148.1 mouse_genomes_project 7 130999546 131003138 - MGP_WSBEiJ_P0085302 protein_coding protein_coding MGP_WSBEiJ_T0085303.1 MGP_WSBEiJ_G0032148.1 mouse_genomes_project 7 130999967 131003567 - MGP_WSBEiJ_P0085303 protein_coding protein_coding MGP_WSBEiJ_T0085304.1 MGP_WSBEiJ_G0032148.1 mouse_genomes_project 7 130999986 131003566 - MGP_WSBEiJ_P0085304 protein_coding protein_coding MGP_WSBEiJ_T0085126.1 MGP_WSBEiJ_G0032124.1 mouse_genomes_project 7 130571566 130591449 - MGP_WSBEiJ_P0085126 Eif3c protein_coding protein_coding MGP_WSBEiJ_T0085127.1 MGP_WSBEiJ_G0032124.1 mouse_genomes_project 7 130587715 130591396 - MGP_WSBEiJ_P0085127 Eif3c protein_coding protein_coding MGP_WSBEiJ_T0085128.1 MGP_WSBEiJ_G0032124.1 mouse_genomes_project 7 130588130 130591242 - MGP_WSBEiJ_P0085128 Eif3c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085958.1 MGP_WSBEiJ_G0032287.1 mouse_genomes_project 7 143880242 143900197 + MGP_WSBEiJ_P0085958 Pwwp2b protein_coding protein_coding MGP_WSBEiJ_T0085959.1 MGP_WSBEiJ_G0032287.1 mouse_genomes_project 7 143880242 143900197 + MGP_WSBEiJ_P0085959 Pwwp2b protein_coding protein_coding MGP_WSBEiJ_T0080053.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1417502 1428576 - MGP_WSBEiJ_P0080053 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080054.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1417502 1428605 - MGP_WSBEiJ_P0080054 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080055.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1417595 1428576 - MGP_WSBEiJ_P0080055 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080056.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1417595 1428560 - MGP_WSBEiJ_P0080056 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080057.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1417687 1426969 - MGP_WSBEiJ_P0080057 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080058.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1417716 1422546 - Tnnt1 protein_coding retained_intron MGP_WSBEiJ_T0080059.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1417718 1420676 - Tnnt1 protein_coding processed_transcript MGP_WSBEiJ_T0080060.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1420277 1428562 - MGP_WSBEiJ_P0080060 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080061.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1420309 1422406 - Tnnt1 protein_coding retained_intron MGP_WSBEiJ_T0080062.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1421117 1427216 - MGP_WSBEiJ_P0080062 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080063.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1421185 1427175 - MGP_WSBEiJ_P0080063 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080064.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1422217 1428983 - MGP_WSBEiJ_P0080064 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080065.1 MGP_WSBEiJ_G0030709.1 mouse_genomes_project 7 1426429 1427708 - MGP_WSBEiJ_P0080065 Tnnt1 protein_coding protein_coding MGP_WSBEiJ_T0080727.1 MGP_WSBEiJ_G0030936.1 mouse_genomes_project 7 17636780 17640057 - MGP_WSBEiJ_P0080727 Apoc4 protein_coding protein_coding MGP_WSBEiJ_T0005141.1 MGP_WSBEiJ_G0004370.1 mouse_genomes_project 7 57129188 57130164 - Gm44506 antisense antisense MGP_WSBEiJ_T0080471.1 MGP_WSBEiJ_G0030862.1 mouse_genomes_project 7 14316276 14320966 - MGP_WSBEiJ_P0080471 Ceacam15 protein_coding protein_coding MGP_WSBEiJ_T0082166.1 MGP_WSBEiJ_G0031291.1 mouse_genomes_project 7 43969985 43974361 + MGP_WSBEiJ_P0082166 Klk10 protein_coding protein_coding MGP_WSBEiJ_T0085968.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144262412 144352129 - MGP_WSBEiJ_P0085968 protein_coding protein_coding MGP_WSBEiJ_T0085969.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144262412 144269829 - MGP_WSBEiJ_P0085969 protein_coding protein_coding MGP_WSBEiJ_T0085970.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144262412 144280302 - MGP_WSBEiJ_P0085970 protein_coding protein_coding MGP_WSBEiJ_T0085971.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144262541 144280282 - protein_coding retained_intron MGP_WSBEiJ_T0085972.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144275944 144280302 - protein_coding retained_intron MGP_WSBEiJ_T0085973.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144304000 144352129 - MGP_WSBEiJ_P0085973 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085974.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144304000 144326296 - MGP_WSBEiJ_P0085974 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085975.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144311006 144352129 - protein_coding retained_intron MGP_WSBEiJ_T0085976.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144343298 144352129 - MGP_WSBEiJ_P0085976 protein_coding protein_coding MGP_WSBEiJ_T0085977.1 MGP_WSBEiJ_G0032290.1 mouse_genomes_project 7 144346580 144352129 - protein_coding retained_intron MGP_WSBEiJ_T0015354.1 MGP_WSBEiJ_G0013484.1 mouse_genomes_project 7 89056590 89057514 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017812.1 MGP_WSBEiJ_G0015109.1 mouse_genomes_project 7 127873599 127883434 - Gm26974 processed_transcript lincRNA MGP_WSBEiJ_T0017813.1 MGP_WSBEiJ_G0015109.1 mouse_genomes_project 7 127881055 127883043 - Gm26974 processed_transcript lincRNA MGP_WSBEiJ_T0017814.1 MGP_WSBEiJ_G0015109.1 mouse_genomes_project 7 127881057 127882547 - Gm26974 processed_transcript retained_intron MGP_WSBEiJ_T0002254.1 MGP_WSBEiJ_G0002172.1 mouse_genomes_project 7 126260036 126263187 + TEC TEC MGP_WSBEiJ_T0081591.1 MGP_WSBEiJ_G0031162.1 mouse_genomes_project 7 29142785 29144518 + MGP_WSBEiJ_P0081591 E130208F15Rik protein_coding protein_coding MGP_WSBEiJ_T0100961.1 MGP_WSBEiJ_G0039418.1 mouse_genomes_project 7 7628101 7636093 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0101116.1 MGP_WSBEiJ_G0039573.1 mouse_genomes_project 7 107568000 107568966 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0086069.1 MGP_WSBEiJ_G0032333.1 mouse_genomes_project 7 145629836 145632832 - MGP_WSBEiJ_P0086069 Bet1l protein_coding protein_coding MGP_WSBEiJ_T0008746.1 MGP_WSBEiJ_G0007071.1 mouse_genomes_project 7 69276250 69284856 - Gm16157 lincRNA lincRNA MGP_WSBEiJ_T0008747.1 MGP_WSBEiJ_G0007071.1 mouse_genomes_project 7 69276863 69287987 - Gm16157 lincRNA lincRNA MGP_WSBEiJ_T0084381.1 MGP_WSBEiJ_G0031921.1 mouse_genomes_project 7 109947590 109948541 - MGP_WSBEiJ_P0084381 protein_coding protein_coding MGP_WSBEiJ_T0010702.1 MGP_WSBEiJ_G0008859.1 mouse_genomes_project 7 62515589 62515687 - Gm23917 miRNA miRNA MGP_WSBEiJ_T0080252.1 MGP_WSBEiJ_G0030782.1 mouse_genomes_project 7 7708969 7717135 - MGP_WSBEiJ_P0080252 Zik1 protein_coding protein_coding MGP_WSBEiJ_T0086127.1 MGP_WSBEiJ_G0032349.1 mouse_genomes_project 7 145932178 145948854 - MGP_WSBEiJ_P0086127 Ano9 protein_coding protein_coding MGP_WSBEiJ_T0080791.1 MGP_WSBEiJ_G0030961.1 mouse_genomes_project 7 21990590 21991505 + MGP_WSBEiJ_P0080791 Vmn1r178 protein_coding protein_coding MGP_WSBEiJ_T0083539.1 MGP_WSBEiJ_G0031624.1 mouse_genomes_project 7 88687107 88845441 + MGP_WSBEiJ_P0083539 protein_coding protein_coding MGP_WSBEiJ_T0083544.1 MGP_WSBEiJ_G0031624.1 mouse_genomes_project 7 88844509 88845441 + MGP_WSBEiJ_P0083544 protein_coding protein_coding MGP_WSBEiJ_T0081763.1 MGP_WSBEiJ_G0031200.1 mouse_genomes_project 7 29820767 29835471 - Usf2 protein_coding retained_intron MGP_WSBEiJ_T0081764.1 MGP_WSBEiJ_G0031200.1 mouse_genomes_project 7 29820857 29835927 - MGP_WSBEiJ_P0081764 Usf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081765.1 MGP_WSBEiJ_G0031200.1 mouse_genomes_project 7 29826573 29836779 - MGP_WSBEiJ_P0081765 Usf2 protein_coding protein_coding MGP_WSBEiJ_T0081766.1 MGP_WSBEiJ_G0031200.1 mouse_genomes_project 7 29835947 29836671 - Usf2 protein_coding processed_transcript MGP_WSBEiJ_T0015235.1 MGP_WSBEiJ_G0013365.1 mouse_genomes_project 7 14251290 14251405 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084184.1 MGP_WSBEiJ_G0031838.1 mouse_genomes_project 7 106927061 106928006 - MGP_WSBEiJ_P0084184 protein_coding protein_coding MGP_WSBEiJ_T0080853.1 MGP_WSBEiJ_G0030978.1 mouse_genomes_project 7 22605990 22619368 + MGP_WSBEiJ_P0080853 Plaur protein_coding protein_coding MGP_WSBEiJ_T0080854.1 MGP_WSBEiJ_G0030978.1 mouse_genomes_project 7 22605991 22608893 + Plaur protein_coding retained_intron MGP_WSBEiJ_T0080855.1 MGP_WSBEiJ_G0030978.1 mouse_genomes_project 7 22606001 22616366 + Plaur protein_coding retained_intron MGP_WSBEiJ_T0080856.1 MGP_WSBEiJ_G0030978.1 mouse_genomes_project 7 22606006 22619369 + Plaur protein_coding retained_intron MGP_WSBEiJ_T0080857.1 MGP_WSBEiJ_G0030978.1 mouse_genomes_project 7 22606006 22619120 + MGP_WSBEiJ_P0080857 Plaur protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080858.1 MGP_WSBEiJ_G0030978.1 mouse_genomes_project 7 22606006 22615399 + MGP_WSBEiJ_P0080858 Plaur protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002196.1 MGP_WSBEiJ_G0002115.1 mouse_genomes_project 7 64631652 64632011 + TEC TEC MGP_WSBEiJ_T0082179.1 MGP_WSBEiJ_G0031298.1 mouse_genomes_project 7 44141052 44146951 + MGP_WSBEiJ_P0082179 Klk15 protein_coding protein_coding MGP_WSBEiJ_T0082180.1 MGP_WSBEiJ_G0031298.1 mouse_genomes_project 7 44141105 44146042 + MGP_WSBEiJ_P0082180 Klk15 protein_coding protein_coding MGP_WSBEiJ_T0083224.1 MGP_WSBEiJ_G0031543.1 mouse_genomes_project 7 81218965 81232859 - MGP_WSBEiJ_P0083224 Plin1 protein_coding protein_coding MGP_WSBEiJ_T0083225.1 MGP_WSBEiJ_G0031543.1 mouse_genomes_project 7 81221285 81232243 - MGP_WSBEiJ_P0083225 Plin1 protein_coding protein_coding MGP_WSBEiJ_T0083226.1 MGP_WSBEiJ_G0031543.1 mouse_genomes_project 7 81221285 81232848 - MGP_WSBEiJ_P0083226 Plin1 protein_coding protein_coding MGP_WSBEiJ_T0083227.1 MGP_WSBEiJ_G0031543.1 mouse_genomes_project 7 81222502 81223410 - MGP_WSBEiJ_P0083227 Plin1 protein_coding protein_coding MGP_WSBEiJ_T0083228.1 MGP_WSBEiJ_G0031543.1 mouse_genomes_project 7 81225158 81229937 - MGP_WSBEiJ_P0083228 Plin1 protein_coding protein_coding MGP_WSBEiJ_T0083229.1 MGP_WSBEiJ_G0031543.1 mouse_genomes_project 7 81226583 81232907 - MGP_WSBEiJ_P0083229 Plin1 protein_coding protein_coding MGP_WSBEiJ_T0083230.1 MGP_WSBEiJ_G0031543.1 mouse_genomes_project 7 81229054 81232975 - MGP_WSBEiJ_P0083230 Plin1 protein_coding protein_coding MGP_WSBEiJ_T0083249.1 MGP_WSBEiJ_G0031552.1 mouse_genomes_project 7 81629414 81651928 - MGP_WSBEiJ_P0083249 Idh2 protein_coding protein_coding MGP_WSBEiJ_T0083250.1 MGP_WSBEiJ_G0031552.1 mouse_genomes_project 7 81629418 81651868 - MGP_WSBEiJ_P0083250 Idh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083251.1 MGP_WSBEiJ_G0031552.1 mouse_genomes_project 7 81629597 81632971 - Idh2 protein_coding retained_intron MGP_WSBEiJ_T0083252.1 MGP_WSBEiJ_G0031552.1 mouse_genomes_project 7 81629611 81630597 - Idh2 protein_coding retained_intron MGP_WSBEiJ_T0083253.1 MGP_WSBEiJ_G0031552.1 mouse_genomes_project 7 81629627 81651840 - MGP_WSBEiJ_P0083253 Idh2 protein_coding protein_coding MGP_WSBEiJ_T0083254.1 MGP_WSBEiJ_G0031552.1 mouse_genomes_project 7 81630595 81635443 - MGP_WSBEiJ_P0083254 Idh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083255.1 MGP_WSBEiJ_G0031552.1 mouse_genomes_project 7 81632733 81633701 - Idh2 protein_coding retained_intron MGP_WSBEiJ_T0082673.1 MGP_WSBEiJ_G0031425.1 mouse_genomes_project 7 47235180 47268435 + MGP_WSBEiJ_P0082673 Gtf2h1 protein_coding protein_coding MGP_WSBEiJ_T0082674.1 MGP_WSBEiJ_G0031425.1 mouse_genomes_project 7 47235191 47244562 + MGP_WSBEiJ_P0082674 Gtf2h1 protein_coding protein_coding MGP_WSBEiJ_T0082675.1 MGP_WSBEiJ_G0031425.1 mouse_genomes_project 7 47235748 47267908 + MGP_WSBEiJ_P0082675 Gtf2h1 protein_coding protein_coding MGP_WSBEiJ_T0082676.1 MGP_WSBEiJ_G0031425.1 mouse_genomes_project 7 47241198 47267541 + MGP_WSBEiJ_P0082676 Gtf2h1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082677.1 MGP_WSBEiJ_G0031425.1 mouse_genomes_project 7 47248042 47256501 + Gtf2h1 protein_coding retained_intron MGP_WSBEiJ_T0096839.1 MGP_WSBEiJ_G0035520.1 mouse_genomes_project 7 62940590 62944906 - pseudogene pseudogene MGP_WSBEiJ_T0100331.1 MGP_WSBEiJ_G0038822.1 mouse_genomes_project 7 107229126 107231588 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100332.1 MGP_WSBEiJ_G0038822.1 mouse_genomes_project 7 107229826 107231067 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0084275.1 MGP_WSBEiJ_G0031894.1 mouse_genomes_project 7 108291299 108339144 + MGP_WSBEiJ_P0084275 Cckbr protein_coding protein_coding MGP_WSBEiJ_T0084276.1 MGP_WSBEiJ_G0031894.1 mouse_genomes_project 7 108291302 108302511 + MGP_WSBEiJ_P0084276 Cckbr protein_coding protein_coding MGP_WSBEiJ_T0080730.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17657352 17660396 - MGP_WSBEiJ_P0080730 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080731.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17657510 17660282 - MGP_WSBEiJ_P0080731 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080732.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17657515 17659637 - MGP_WSBEiJ_P0080732 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080733.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17657515 17660238 - MGP_WSBEiJ_P0080733 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080734.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17657515 17660282 - MGP_WSBEiJ_P0080734 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080735.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17657863 17660268 - MGP_WSBEiJ_P0080735 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080736.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17657864 17659851 - MGP_WSBEiJ_P0080736 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080737.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17658087 17659477 - MGP_WSBEiJ_P0080737 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080738.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17658483 17660280 - MGP_WSBEiJ_P0080738 Apoe protein_coding protein_coding MGP_WSBEiJ_T0080739.1 MGP_WSBEiJ_G0030938.1 mouse_genomes_project 7 17658499 17659497 - MGP_WSBEiJ_P0080739 Apoe protein_coding protein_coding MGP_WSBEiJ_T0086045.1 MGP_WSBEiJ_G0032316.1 mouse_genomes_project 7 145140818 145141748 - MGP_WSBEiJ_P0086045 Olfr532 protein_coding protein_coding MGP_WSBEiJ_T0086447.1 MGP_WSBEiJ_G0032403.1 mouse_genomes_project 7 148065579 148067424 + MGP_WSBEiJ_P0086447 Tssc4 protein_coding protein_coding MGP_WSBEiJ_T0086448.1 MGP_WSBEiJ_G0032403.1 mouse_genomes_project 7 148065671 148066877 + MGP_WSBEiJ_P0086448 Tssc4 protein_coding protein_coding MGP_WSBEiJ_T0086449.1 MGP_WSBEiJ_G0032403.1 mouse_genomes_project 7 148065698 148067418 + MGP_WSBEiJ_P0086449 Tssc4 protein_coding protein_coding MGP_WSBEiJ_T0086450.1 MGP_WSBEiJ_G0032403.1 mouse_genomes_project 7 148065698 148067418 + MGP_WSBEiJ_P0086450 Tssc4 protein_coding protein_coding MGP_WSBEiJ_T0086451.1 MGP_WSBEiJ_G0032403.1 mouse_genomes_project 7 148065754 148066876 + MGP_WSBEiJ_P0086451 Tssc4 protein_coding protein_coding MGP_WSBEiJ_T0086452.1 MGP_WSBEiJ_G0032403.1 mouse_genomes_project 7 148065874 148066940 + MGP_WSBEiJ_P0086452 Tssc4 protein_coding protein_coding MGP_WSBEiJ_T0101093.1 MGP_WSBEiJ_G0039550.1 mouse_genomes_project 7 88650035 88650730 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080187.1 MGP_WSBEiJ_G0030750.1 mouse_genomes_project 7 2104395 2105679 - MGP_WSBEiJ_P0080187 Vmn1r55 protein_coding protein_coding MGP_WSBEiJ_T0082429.1 MGP_WSBEiJ_G0031364.1 mouse_genomes_project 7 45598452 45609939 + MGP_WSBEiJ_P0082429 protein_coding protein_coding MGP_WSBEiJ_T0082430.1 MGP_WSBEiJ_G0031364.1 mouse_genomes_project 7 45603454 45606210 + protein_coding processed_transcript MGP_WSBEiJ_T0082431.1 MGP_WSBEiJ_G0031364.1 mouse_genomes_project 7 45603687 45607604 + protein_coding retained_intron MGP_WSBEiJ_T0082432.1 MGP_WSBEiJ_G0031364.1 mouse_genomes_project 7 45603723 45609526 + MGP_WSBEiJ_P0082432 protein_coding protein_coding MGP_WSBEiJ_T0082433.1 MGP_WSBEiJ_G0031364.1 mouse_genomes_project 7 45603820 45609938 + MGP_WSBEiJ_P0082433 protein_coding protein_coding MGP_WSBEiJ_T0082434.1 MGP_WSBEiJ_G0031364.1 mouse_genomes_project 7 45608081 45609943 + protein_coding retained_intron MGP_WSBEiJ_T0080776.1 MGP_WSBEiJ_G0030951.1 mouse_genomes_project 7 18018593 18046397 + MGP_WSBEiJ_P0080776 protein_coding protein_coding MGP_WSBEiJ_T0008657.1 MGP_WSBEiJ_G0006999.1 mouse_genomes_project 7 898489 900217 + 1700095K22Rik lincRNA lincRNA MGP_WSBEiJ_T0084839.1 MGP_WSBEiJ_G0032062.1 mouse_genomes_project 7 123832467 123852308 + MGP_WSBEiJ_P0084839 Tmem159 protein_coding protein_coding MGP_WSBEiJ_T0084840.1 MGP_WSBEiJ_G0032062.1 mouse_genomes_project 7 123832486 123835331 + Tmem159 protein_coding retained_intron MGP_WSBEiJ_T0084841.1 MGP_WSBEiJ_G0032062.1 mouse_genomes_project 7 123832999 123852314 + MGP_WSBEiJ_P0084841 Tmem159 protein_coding protein_coding MGP_WSBEiJ_T0082791.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56677136 56716148 + MGP_WSBEiJ_P0082791 Tubgcp5 protein_coding protein_coding MGP_WSBEiJ_T0082792.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56677147 56710253 + Tubgcp5 protein_coding retained_intron MGP_WSBEiJ_T0082793.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56677150 56715917 + MGP_WSBEiJ_P0082793 Tubgcp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082794.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56677174 56715917 + MGP_WSBEiJ_P0082794 Tubgcp5 protein_coding protein_coding MGP_WSBEiJ_T0082795.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56677208 56681896 + MGP_WSBEiJ_P0082795 Tubgcp5 protein_coding protein_coding MGP_WSBEiJ_T0082796.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56687608 56691933 + Tubgcp5 protein_coding retained_intron MGP_WSBEiJ_T0082797.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56689261 56700916 + Tubgcp5 protein_coding retained_intron MGP_WSBEiJ_T0082798.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56700463 56702188 + Tubgcp5 protein_coding retained_intron MGP_WSBEiJ_T0082799.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56704806 56714083 + Tubgcp5 protein_coding retained_intron MGP_WSBEiJ_T0082800.1 MGP_WSBEiJ_G0031463.1 mouse_genomes_project 7 56709434 56715708 + MGP_WSBEiJ_P0082800 Tubgcp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0015395.1 MGP_WSBEiJ_G0013525.1 mouse_genomes_project 7 124367675 124368526 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080593.1 MGP_WSBEiJ_G0030901.1 mouse_genomes_project 7 16959598 16979968 + MGP_WSBEiJ_P0080593 Rsph6a protein_coding protein_coding MGP_WSBEiJ_T0080594.1 MGP_WSBEiJ_G0030901.1 mouse_genomes_project 7 16959607 16979968 + MGP_WSBEiJ_P0080594 Rsph6a protein_coding protein_coding MGP_WSBEiJ_T0080595.1 MGP_WSBEiJ_G0030901.1 mouse_genomes_project 7 16962265 16970407 + Rsph6a protein_coding processed_transcript MGP_WSBEiJ_T0008709.1 MGP_WSBEiJ_G0007044.1 mouse_genomes_project 7 39521202 39529188 - lincRNA lincRNA MGP_WSBEiJ_T0008710.1 MGP_WSBEiJ_G0007044.1 mouse_genomes_project 7 39521206 39529205 - lincRNA lincRNA MGP_WSBEiJ_T0008711.1 MGP_WSBEiJ_G0007044.1 mouse_genomes_project 7 39521207 39529226 - lincRNA lincRNA MGP_WSBEiJ_T0008712.1 MGP_WSBEiJ_G0007044.1 mouse_genomes_project 7 39521260 39529189 - lincRNA lincRNA MGP_WSBEiJ_T0083549.1 MGP_WSBEiJ_G0031632.1 mouse_genomes_project 7 89064879 89128744 + MGP_WSBEiJ_P0083549 protein_coding protein_coding MGP_WSBEiJ_T0011503.1 MGP_WSBEiJ_G0009660.1 mouse_genomes_project 7 148273146 148273265 + Gm27803 misc_RNA misc_RNA MGP_WSBEiJ_T0008890.1 MGP_WSBEiJ_G0007161.1 mouse_genomes_project 7 132668032 132680859 - Gm45018 lincRNA lincRNA MGP_WSBEiJ_T0085046.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130088466 130193891 - MGP_WSBEiJ_P0085046 Xpo6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0085047.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130090119 130194398 - MGP_WSBEiJ_P0085047 Xpo6 protein_coding protein_coding MGP_WSBEiJ_T0085048.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130090124 130098456 - Xpo6 protein_coding retained_intron MGP_WSBEiJ_T0085049.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130090124 130151199 - Xpo6 protein_coding processed_transcript MGP_WSBEiJ_T0085050.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130090124 130093213 - MGP_WSBEiJ_P0085050 Xpo6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085051.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130090137 130095571 - MGP_WSBEiJ_P0085051 Xpo6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085052.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130090472 130093426 - Xpo6 protein_coding retained_intron MGP_WSBEiJ_T0085053.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130090749 130095534 - MGP_WSBEiJ_P0085053 Xpo6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085054.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130093161 130101296 - MGP_WSBEiJ_P0085054 Xpo6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085055.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130096925 130101228 - MGP_WSBEiJ_P0085055 Xpo6 protein_coding protein_coding MGP_WSBEiJ_T0085056.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130101301 130131156 - MGP_WSBEiJ_P0085056 Xpo6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085057.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130108294 130194412 - Xpo6 protein_coding retained_intron MGP_WSBEiJ_T0085058.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130118049 130143571 - MGP_WSBEiJ_P0085058 Xpo6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085059.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130131136 130151340 - MGP_WSBEiJ_P0085059 Xpo6 protein_coding protein_coding MGP_WSBEiJ_T0085060.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130139831 130151348 - Xpo6 protein_coding processed_transcript MGP_WSBEiJ_T0085061.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130142223 130194332 - Xpo6 protein_coding processed_transcript MGP_WSBEiJ_T0085062.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130151335 130193918 - MGP_WSBEiJ_P0085062 Xpo6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085063.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130159563 130173921 - Xpo6 protein_coding processed_transcript MGP_WSBEiJ_T0085064.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130159563 130194403 - MGP_WSBEiJ_P0085064 Xpo6 protein_coding protein_coding MGP_WSBEiJ_T0085065.1 MGP_WSBEiJ_G0032112.1 mouse_genomes_project 7 130172057 130179162 - Xpo6 protein_coding retained_intron MGP_WSBEiJ_T0010657.1 MGP_WSBEiJ_G0008814.1 mouse_genomes_project 7 3981848 3981932 + Mir3099 miRNA miRNA MGP_WSBEiJ_T0080474.1 MGP_WSBEiJ_G0030864.1 mouse_genomes_project 7 14393244 14404119 + MGP_WSBEiJ_P0080474 Ap2s1 protein_coding protein_coding MGP_WSBEiJ_T0080475.1 MGP_WSBEiJ_G0030864.1 mouse_genomes_project 7 14393278 14403839 + MGP_WSBEiJ_P0080475 Ap2s1 protein_coding protein_coding MGP_WSBEiJ_T0080476.1 MGP_WSBEiJ_G0030864.1 mouse_genomes_project 7 14393306 14403759 + MGP_WSBEiJ_P0080476 Ap2s1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080477.1 MGP_WSBEiJ_G0030864.1 mouse_genomes_project 7 14393372 14403573 + Ap2s1 protein_coding processed_transcript MGP_WSBEiJ_T0080478.1 MGP_WSBEiJ_G0030864.1 mouse_genomes_project 7 14401589 14404119 + Ap2s1 protein_coding retained_intron MGP_WSBEiJ_T0083723.1 MGP_WSBEiJ_G0031675.1 mouse_genomes_project 7 100270110 100337277 + Pak1 protein_coding retained_intron MGP_WSBEiJ_T0083724.1 MGP_WSBEiJ_G0031675.1 mouse_genomes_project 7 100270110 100401526 + MGP_WSBEiJ_P0083724 Pak1 protein_coding protein_coding MGP_WSBEiJ_T0083725.1 MGP_WSBEiJ_G0031675.1 mouse_genomes_project 7 100310845 100349766 + MGP_WSBEiJ_P0083725 Pak1 protein_coding protein_coding MGP_WSBEiJ_T0083726.1 MGP_WSBEiJ_G0031675.1 mouse_genomes_project 7 100324272 100402024 + MGP_WSBEiJ_P0083726 Pak1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083727.1 MGP_WSBEiJ_G0031675.1 mouse_genomes_project 7 100324272 100402024 + MGP_WSBEiJ_P0083727 Pak1 protein_coding protein_coding MGP_WSBEiJ_T0083728.1 MGP_WSBEiJ_G0031675.1 mouse_genomes_project 7 100382701 100400925 + Pak1 protein_coding retained_intron MGP_WSBEiJ_T0015220.1 MGP_WSBEiJ_G0013350.1 mouse_genomes_project 7 9770378 9771342 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011495.1 MGP_WSBEiJ_G0009652.1 mouse_genomes_project 7 131101835 131102081 + Gm25333 misc_RNA misc_RNA MGP_WSBEiJ_T0084112.1 MGP_WSBEiJ_G0031769.1 mouse_genomes_project 7 105505910 105510103 - MGP_WSBEiJ_P0084112 Olfr559 protein_coding protein_coding MGP_WSBEiJ_T0002215.1 MGP_WSBEiJ_G0002133.1 mouse_genomes_project 7 75207780 75209950 - TEC TEC MGP_WSBEiJ_T0080410.1 MGP_WSBEiJ_G0030846.1 mouse_genomes_project 7 13646589 13670954 + MGP_WSBEiJ_P0080410 Zfp541 protein_coding protein_coding MGP_WSBEiJ_T0085821.1 MGP_WSBEiJ_G0032255.1 mouse_genomes_project 7 137241088 137263977 + MGP_WSBEiJ_P0085821 Fam175b protein_coding protein_coding MGP_WSBEiJ_T0085822.1 MGP_WSBEiJ_G0032255.1 mouse_genomes_project 7 137241104 137267780 + MGP_WSBEiJ_P0085822 Fam175b protein_coding protein_coding MGP_WSBEiJ_T0085823.1 MGP_WSBEiJ_G0032255.1 mouse_genomes_project 7 137241116 137263714 + MGP_WSBEiJ_P0085823 Fam175b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085824.1 MGP_WSBEiJ_G0032255.1 mouse_genomes_project 7 137241128 137258564 + Fam175b protein_coding retained_intron MGP_WSBEiJ_T0085825.1 MGP_WSBEiJ_G0032255.1 mouse_genomes_project 7 137241128 137267777 + MGP_WSBEiJ_P0085825 Fam175b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085826.1 MGP_WSBEiJ_G0032255.1 mouse_genomes_project 7 137241186 137261447 + Fam175b protein_coding processed_transcript MGP_WSBEiJ_T0085827.1 MGP_WSBEiJ_G0032255.1 mouse_genomes_project 7 137262207 137267779 + Fam175b protein_coding retained_intron MGP_WSBEiJ_T0080215.1 MGP_WSBEiJ_G0030761.1 mouse_genomes_project 7 3466906 3482456 - MGP_WSBEiJ_P0080215 Zfp583 protein_coding protein_coding MGP_WSBEiJ_T0080216.1 MGP_WSBEiJ_G0030761.1 mouse_genomes_project 7 3467522 3481605 - MGP_WSBEiJ_P0080216 Zfp583 protein_coding protein_coding MGP_WSBEiJ_T0080217.1 MGP_WSBEiJ_G0030761.1 mouse_genomes_project 7 3467551 3480445 - MGP_WSBEiJ_P0080217 Zfp583 protein_coding protein_coding MGP_WSBEiJ_T0080218.1 MGP_WSBEiJ_G0030761.1 mouse_genomes_project 7 3468875 3482421 - Zfp583 protein_coding processed_transcript MGP_WSBEiJ_T0080219.1 MGP_WSBEiJ_G0030761.1 mouse_genomes_project 7 3474375 3482375 - Zfp583 protein_coding processed_transcript MGP_WSBEiJ_T0080220.1 MGP_WSBEiJ_G0030761.1 mouse_genomes_project 7 3474829 3482449 - MGP_WSBEiJ_P0080220 Zfp583 protein_coding protein_coding MGP_WSBEiJ_T0098479.1 MGP_WSBEiJ_G0037142.1 mouse_genomes_project 7 46868976 46869083 + Gm22969 snRNA snRNA MGP_WSBEiJ_T0082247.1 MGP_WSBEiJ_G0031316.1 mouse_genomes_project 7 44727644 44734237 - MGP_WSBEiJ_P0082247 Emc10 protein_coding protein_coding MGP_WSBEiJ_T0082248.1 MGP_WSBEiJ_G0031316.1 mouse_genomes_project 7 44727818 44734114 - MGP_WSBEiJ_P0082248 Emc10 protein_coding protein_coding MGP_WSBEiJ_T0082249.1 MGP_WSBEiJ_G0031316.1 mouse_genomes_project 7 44728592 44729726 - Emc10 protein_coding retained_intron MGP_WSBEiJ_T0082250.1 MGP_WSBEiJ_G0031316.1 mouse_genomes_project 7 44729442 44734171 - Emc10 protein_coding retained_intron MGP_WSBEiJ_T0082251.1 MGP_WSBEiJ_G0031316.1 mouse_genomes_project 7 44729710 44734136 - MGP_WSBEiJ_P0082251 Emc10 protein_coding protein_coding MGP_WSBEiJ_T0082252.1 MGP_WSBEiJ_G0031316.1 mouse_genomes_project 7 44731981 44734105 - Emc10 protein_coding retained_intron MGP_WSBEiJ_T0002172.1 MGP_WSBEiJ_G0002091.1 mouse_genomes_project 7 37159641 37162901 - TEC TEC MGP_WSBEiJ_T0011476.1 MGP_WSBEiJ_G0009633.1 mouse_genomes_project 7 4018950 4019248 - Gm22649 misc_RNA misc_RNA MGP_WSBEiJ_T0101100.1 MGP_WSBEiJ_G0039557.1 mouse_genomes_project 7 105924255 105925197 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083145.1 MGP_WSBEiJ_G0031530.1 mouse_genomes_project 7 80267800 80294802 - MGP_WSBEiJ_P0083145 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083146.1 MGP_WSBEiJ_G0031530.1 mouse_genomes_project 7 80268520 80280436 - MGP_WSBEiJ_P0083146 protein_coding protein_coding MGP_WSBEiJ_T0083147.1 MGP_WSBEiJ_G0031530.1 mouse_genomes_project 7 80275143 80290831 - MGP_WSBEiJ_P0083147 protein_coding protein_coding MGP_WSBEiJ_T0002160.1 MGP_WSBEiJ_G0002079.1 mouse_genomes_project 7 33648961 33652542 - TEC TEC MGP_WSBEiJ_T0101056.1 MGP_WSBEiJ_G0039513.1 mouse_genomes_project 7 48741568 48741770 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080249.1 MGP_WSBEiJ_G0030779.1 mouse_genomes_project 7 7359020 7378034 - MGP_WSBEiJ_P0080249 protein_coding protein_coding MGP_WSBEiJ_T0081055.1 MGP_WSBEiJ_G0031026.1 mouse_genomes_project 7 24067523 24099879 - MGP_WSBEiJ_P0081055 Hnrnpul1 protein_coding protein_coding MGP_WSBEiJ_T0081056.1 MGP_WSBEiJ_G0031026.1 mouse_genomes_project 7 24081850 24099945 - MGP_WSBEiJ_P0081056 Hnrnpul1 protein_coding protein_coding MGP_WSBEiJ_T0081057.1 MGP_WSBEiJ_G0031026.1 mouse_genomes_project 7 24084528 24086818 - Hnrnpul1 protein_coding retained_intron MGP_WSBEiJ_T0081058.1 MGP_WSBEiJ_G0031026.1 mouse_genomes_project 7 24086994 24089609 - Hnrnpul1 protein_coding retained_intron MGP_WSBEiJ_T0080147.1 MGP_WSBEiJ_G0030729.1 mouse_genomes_project 7 1822120 1844379 + MGP_WSBEiJ_P0080147 Isoc2a protein_coding protein_coding MGP_WSBEiJ_T0015315.1 MGP_WSBEiJ_G0013445.1 mouse_genomes_project 7 57103376 57104268 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080323.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10318557 10325438 + MGP_WSBEiJ_P0080323 Trim28 protein_coding protein_coding MGP_WSBEiJ_T0080324.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10322019 10323527 + Trim28 protein_coding retained_intron MGP_WSBEiJ_T0080325.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10322231 10322905 + Trim28 protein_coding retained_intron MGP_WSBEiJ_T0080326.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10322423 10324002 + Trim28 protein_coding retained_intron MGP_WSBEiJ_T0080327.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10322807 10323768 + Trim28 protein_coding retained_intron MGP_WSBEiJ_T0080328.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10323282 10324329 + Trim28 protein_coding retained_intron MGP_WSBEiJ_T0080329.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10323493 10324398 + Trim28 protein_coding retained_intron MGP_WSBEiJ_T0080330.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10324106 10324750 + Trim28 protein_coding retained_intron MGP_WSBEiJ_T0080331.1 MGP_WSBEiJ_G0030815.1 mouse_genomes_project 7 10324774 10325435 + Trim28 protein_coding retained_intron MGP_WSBEiJ_T0083533.1 MGP_WSBEiJ_G0031618.1 mouse_genomes_project 7 88461082 88462042 - MGP_WSBEiJ_P0083533 Olfr305 protein_coding protein_coding MGP_WSBEiJ_T0082873.1 MGP_WSBEiJ_G0031479.1 mouse_genomes_project 7 63260451 63262998 - MGP_WSBEiJ_P0082873 Mkrn3 protein_coding protein_coding MGP_WSBEiJ_T0084108.1 MGP_WSBEiJ_G0031765.1 mouse_genomes_project 7 105448324 105449347 + MGP_WSBEiJ_P0084108 Olfr556 protein_coding protein_coding MGP_WSBEiJ_T0082615.1 MGP_WSBEiJ_G0031410.1 mouse_genomes_project 7 46422085 46475232 + MGP_WSBEiJ_P0082615 Nomo1 protein_coding protein_coding MGP_WSBEiJ_T0082616.1 MGP_WSBEiJ_G0031410.1 mouse_genomes_project 7 46439159 46439932 + Nomo1 protein_coding retained_intron MGP_WSBEiJ_T0082617.1 MGP_WSBEiJ_G0031410.1 mouse_genomes_project 7 46445253 46448273 + Nomo1 protein_coding retained_intron MGP_WSBEiJ_T0082618.1 MGP_WSBEiJ_G0031410.1 mouse_genomes_project 7 46449545 46452300 + Nomo1 protein_coding retained_intron MGP_WSBEiJ_T0082619.1 MGP_WSBEiJ_G0031410.1 mouse_genomes_project 7 46473695 46474823 + Nomo1 protein_coding retained_intron MGP_WSBEiJ_T0005199.1 MGP_WSBEiJ_G0004410.1 mouse_genomes_project 7 124661957 124664558 - antisense antisense MGP_WSBEiJ_T0005201.1 MGP_WSBEiJ_G0004412.1 mouse_genomes_project 7 125280920 125410247 - 4933432K03Rik antisense antisense MGP_WSBEiJ_T0005202.1 MGP_WSBEiJ_G0004412.1 mouse_genomes_project 7 125378425 125410249 - 4933432K03Rik antisense antisense MGP_WSBEiJ_T0005203.1 MGP_WSBEiJ_G0004412.1 mouse_genomes_project 7 125409688 125428401 - 4933432K03Rik antisense antisense MGP_WSBEiJ_T0008814.1 MGP_WSBEiJ_G0007113.1 mouse_genomes_project 7 86330981 86379542 + lincRNA lincRNA MGP_WSBEiJ_T0081150.1 MGP_WSBEiJ_G0031054.1 mouse_genomes_project 7 25766724 25775097 + Numbl protein_coding processed_transcript MGP_WSBEiJ_T0081151.1 MGP_WSBEiJ_G0031054.1 mouse_genomes_project 7 25767016 25792206 + MGP_WSBEiJ_P0081151 Numbl protein_coding protein_coding MGP_WSBEiJ_T0081152.1 MGP_WSBEiJ_G0031054.1 mouse_genomes_project 7 25767074 25773254 + Numbl protein_coding processed_transcript MGP_WSBEiJ_T0081153.1 MGP_WSBEiJ_G0031054.1 mouse_genomes_project 7 25767097 25792209 + Numbl protein_coding retained_intron MGP_WSBEiJ_T0081154.1 MGP_WSBEiJ_G0031054.1 mouse_genomes_project 7 25769651 25792046 + Numbl protein_coding retained_intron MGP_WSBEiJ_T0081836.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30037311 30059210 - Gramd1a protein_coding retained_intron MGP_WSBEiJ_T0081837.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30037311 30059210 - MGP_WSBEiJ_P0081837 Gramd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081838.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30037311 30059231 - MGP_WSBEiJ_P0081838 Gramd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081839.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30037311 30059280 - MGP_WSBEiJ_P0081839 Gramd1a protein_coding protein_coding MGP_WSBEiJ_T0081840.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30037311 30059212 - MGP_WSBEiJ_P0081840 Gramd1a protein_coding protein_coding MGP_WSBEiJ_T0081841.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30039543 30040549 - Gramd1a protein_coding retained_intron MGP_WSBEiJ_T0081842.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30039775 30045356 - MGP_WSBEiJ_P0081842 Gramd1a protein_coding protein_coding MGP_WSBEiJ_T0081843.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30040023 30050937 - MGP_WSBEiJ_P0081843 Gramd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081844.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30042775 30047096 - MGP_WSBEiJ_P0081844 Gramd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081845.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30047045 30059210 - MGP_WSBEiJ_P0081845 Gramd1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081846.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30048252 30059151 - Gramd1a protein_coding retained_intron MGP_WSBEiJ_T0081847.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30048360 30060267 - MGP_WSBEiJ_P0081847 Gramd1a protein_coding protein_coding MGP_WSBEiJ_T0081848.1 MGP_WSBEiJ_G0031210.1 mouse_genomes_project 7 30049781 30064137 - MGP_WSBEiJ_P0081848 Gramd1a protein_coding protein_coding MGP_WSBEiJ_T0086051.1 MGP_WSBEiJ_G0032322.1 mouse_genomes_project 7 145387062 145387998 + MGP_WSBEiJ_P0086051 Olfr61 protein_coding protein_coding MGP_WSBEiJ_T0081530.1 MGP_WSBEiJ_G0031151.1 mouse_genomes_project 7 28994109 28995974 + MGP_WSBEiJ_P0081530 Cox7a1 protein_coding protein_coding MGP_WSBEiJ_T0010648.1 MGP_WSBEiJ_G0008805.1 mouse_genomes_project 7 97967 98049 + Mir291a miRNA miRNA MGP_WSBEiJ_T0081308.1 MGP_WSBEiJ_G0031097.1 mouse_genomes_project 7 27116245 27155729 - MGP_WSBEiJ_P0081308 protein_coding protein_coding MGP_WSBEiJ_T0101048.1 MGP_WSBEiJ_G0039505.1 mouse_genomes_project 7 47996674 48512222 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085802.1 MGP_WSBEiJ_G0032251.1 mouse_genomes_project 7 136963702 136968448 - MGP_WSBEiJ_P0085802 Nkx1-2 protein_coding protein_coding MGP_WSBEiJ_T0099731.1 MGP_WSBEiJ_G0038394.1 mouse_genomes_project 7 90546057 90546190 + Gm25345 snoRNA snoRNA MGP_WSBEiJ_T0085830.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137372906 137401742 - MGP_WSBEiJ_P0085830 Ctbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085831.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137372921 137401500 - MGP_WSBEiJ_P0085831 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085832.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137373548 137512863 - MGP_WSBEiJ_P0085832 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085833.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137377105 137409793 - MGP_WSBEiJ_P0085833 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085834.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137380573 137511050 - MGP_WSBEiJ_P0085834 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085835.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137400718 137512223 - Ctbp2 protein_coding processed_transcript MGP_WSBEiJ_T0085836.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137400718 137512194 - Ctbp2 protein_coding processed_transcript MGP_WSBEiJ_T0085837.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137400908 137512192 - MGP_WSBEiJ_P0085837 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085838.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137400982 137501553 - Ctbp2 protein_coding processed_transcript MGP_WSBEiJ_T0085839.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137401087 137417158 - Ctbp2 protein_coding processed_transcript MGP_WSBEiJ_T0085840.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137401105 137512423 - Ctbp2 protein_coding processed_transcript MGP_WSBEiJ_T0085841.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137401373 137511465 - MGP_WSBEiJ_P0085841 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085842.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137401415 137512223 - MGP_WSBEiJ_P0085842 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085843.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137412745 137513005 - MGP_WSBEiJ_P0085843 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085844.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137412763 137500643 - MGP_WSBEiJ_P0085844 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085845.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137412764 137512158 - MGP_WSBEiJ_P0085845 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085846.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137412807 137512509 - MGP_WSBEiJ_P0085846 Ctbp2 protein_coding protein_coding MGP_WSBEiJ_T0085847.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137430753 137512509 - Ctbp2 protein_coding processed_transcript MGP_WSBEiJ_T0085848.1 MGP_WSBEiJ_G0032257.1 mouse_genomes_project 7 137468511 137512030 - Ctbp2 protein_coding retained_intron MGP_WSBEiJ_T0084526.1 MGP_WSBEiJ_G0031998.1 mouse_genomes_project 7 114104062 114148674 + MGP_WSBEiJ_P0084526 Ampd3 protein_coding protein_coding MGP_WSBEiJ_T0084527.1 MGP_WSBEiJ_G0031998.1 mouse_genomes_project 7 114104191 114127140 + Ampd3 protein_coding processed_transcript MGP_WSBEiJ_T0084528.1 MGP_WSBEiJ_G0031998.1 mouse_genomes_project 7 114108464 114149160 + MGP_WSBEiJ_P0084528 Ampd3 protein_coding protein_coding MGP_WSBEiJ_T0084529.1 MGP_WSBEiJ_G0031998.1 mouse_genomes_project 7 114108648 114130577 + Ampd3 protein_coding retained_intron MGP_WSBEiJ_T0084530.1 MGP_WSBEiJ_G0031998.1 mouse_genomes_project 7 114109532 114124670 + MGP_WSBEiJ_P0084530 Ampd3 protein_coding protein_coding MGP_WSBEiJ_T0084531.1 MGP_WSBEiJ_G0031998.1 mouse_genomes_project 7 114110104 114124592 + MGP_WSBEiJ_P0084531 Ampd3 protein_coding protein_coding MGP_WSBEiJ_T0084532.1 MGP_WSBEiJ_G0031998.1 mouse_genomes_project 7 114113552 114127185 + MGP_WSBEiJ_P0084532 Ampd3 protein_coding protein_coding MGP_WSBEiJ_T0010729.1 MGP_WSBEiJ_G0008886.1 mouse_genomes_project 7 104196544 104196612 + Mir139 miRNA miRNA MGP_WSBEiJ_T0084348.1 MGP_WSBEiJ_G0031905.1 mouse_genomes_project 7 108634130 108639661 - MGP_WSBEiJ_P0084348 protein_coding protein_coding MGP_WSBEiJ_T0084356.1 MGP_WSBEiJ_G0031905.1 mouse_genomes_project 7 108637631 108638676 - protein_coding retained_intron MGP_WSBEiJ_T0084357.1 MGP_WSBEiJ_G0031905.1 mouse_genomes_project 7 108637641 108638346 - protein_coding retained_intron MGP_WSBEiJ_T0084358.1 MGP_WSBEiJ_G0031905.1 mouse_genomes_project 7 108637972 108638936 - protein_coding retained_intron MGP_WSBEiJ_T0099743.1 MGP_WSBEiJ_G0038406.1 mouse_genomes_project 7 113342576 113342759 + Snora23 snoRNA snoRNA MGP_WSBEiJ_T0081104.1 MGP_WSBEiJ_G0031042.1 mouse_genomes_project 7 25488542 25496515 + MGP_WSBEiJ_P0081104 protein_coding protein_coding MGP_WSBEiJ_T0082844.1 MGP_WSBEiJ_G0031471.1 mouse_genomes_project 7 58287352 58713128 + MGP_WSBEiJ_P0082844 Gabrb3 protein_coding protein_coding MGP_WSBEiJ_T0082845.1 MGP_WSBEiJ_G0031471.1 mouse_genomes_project 7 58465313 58711964 + MGP_WSBEiJ_P0082845 Gabrb3 protein_coding protein_coding MGP_WSBEiJ_T0082846.1 MGP_WSBEiJ_G0031471.1 mouse_genomes_project 7 58465957 58713132 + MGP_WSBEiJ_P0082846 Gabrb3 protein_coding protein_coding MGP_WSBEiJ_T0082847.1 MGP_WSBEiJ_G0031471.1 mouse_genomes_project 7 58465968 58648577 + Gabrb3 protein_coding retained_intron MGP_WSBEiJ_T0082848.1 MGP_WSBEiJ_G0031471.1 mouse_genomes_project 7 58466325 58700696 + MGP_WSBEiJ_P0082848 Gabrb3 protein_coding protein_coding MGP_WSBEiJ_T0082849.1 MGP_WSBEiJ_G0031471.1 mouse_genomes_project 7 58674903 58700641 + Gabrb3 protein_coding retained_intron MGP_WSBEiJ_T0015218.1 MGP_WSBEiJ_G0013348.1 mouse_genomes_project 7 3705760 3706786 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082360.1 MGP_WSBEiJ_G0031338.1 mouse_genomes_project 7 45179169 45209354 - MGP_WSBEiJ_P0082360 Ap2a1 protein_coding protein_coding MGP_WSBEiJ_T0082361.1 MGP_WSBEiJ_G0031338.1 mouse_genomes_project 7 45179169 45210753 - MGP_WSBEiJ_P0082361 Ap2a1 protein_coding protein_coding MGP_WSBEiJ_T0082362.1 MGP_WSBEiJ_G0031338.1 mouse_genomes_project 7 45179169 45209354 - MGP_WSBEiJ_P0082362 Ap2a1 protein_coding protein_coding MGP_WSBEiJ_T0082363.1 MGP_WSBEiJ_G0031338.1 mouse_genomes_project 7 45179169 45210753 - MGP_WSBEiJ_P0082363 Ap2a1 protein_coding protein_coding MGP_WSBEiJ_T0015380.1 MGP_WSBEiJ_G0013510.1 mouse_genomes_project 7 105915761 105916062 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080529.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14679195 14702043 - MGP_WSBEiJ_P0080529 Ppp5c protein_coding protein_coding MGP_WSBEiJ_T0080530.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14679658 14681630 - Ppp5c protein_coding retained_intron MGP_WSBEiJ_T0080531.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14681699 14690018 - Ppp5c protein_coding retained_intron MGP_WSBEiJ_T0080532.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14682333 14702154 - Ppp5c protein_coding processed_transcript MGP_WSBEiJ_T0080533.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14682342 14683729 - Ppp5c protein_coding retained_intron MGP_WSBEiJ_T0080534.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14683137 14702124 - Ppp5c protein_coding processed_transcript MGP_WSBEiJ_T0080535.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14683161 14684694 - Ppp5c protein_coding retained_intron MGP_WSBEiJ_T0080536.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14684496 14698976 - Ppp5c protein_coding processed_transcript MGP_WSBEiJ_T0080537.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14690010 14701845 - Ppp5c protein_coding processed_transcript MGP_WSBEiJ_T0080538.1 MGP_WSBEiJ_G0030876.1 mouse_genomes_project 7 14696602 14702019 - Ppp5c protein_coding processed_transcript MGP_WSBEiJ_T0079886.1 MGP_WSBEiJ_G0030681.1 mouse_genomes_project 7 180865 192539 + MGP_WSBEiJ_P0079886 Myadm protein_coding protein_coding MGP_WSBEiJ_T0079888.1 MGP_WSBEiJ_G0030681.1 mouse_genomes_project 7 182316 193602 + MGP_WSBEiJ_P0079888 Myadm protein_coding protein_coding MGP_WSBEiJ_T0079889.1 MGP_WSBEiJ_G0030681.1 mouse_genomes_project 7 182357 194698 + MGP_WSBEiJ_P0079889 Myadm protein_coding protein_coding MGP_WSBEiJ_T0079890.1 MGP_WSBEiJ_G0030681.1 mouse_genomes_project 7 183261 191227 + MGP_WSBEiJ_P0079890 Myadm protein_coding protein_coding MGP_WSBEiJ_T0079891.1 MGP_WSBEiJ_G0030681.1 mouse_genomes_project 7 185932 193575 + MGP_WSBEiJ_P0079891 Myadm protein_coding protein_coding MGP_WSBEiJ_T0083482.1 MGP_WSBEiJ_G0031595.1 mouse_genomes_project 7 84925482 84933535 + MGP_WSBEiJ_P0083482 protein_coding protein_coding MGP_WSBEiJ_T0081704.1 MGP_WSBEiJ_G0031188.1 mouse_genomes_project 7 29574835 29576669 - MGP_WSBEiJ_P0081704 Tmem147 protein_coding protein_coding MGP_WSBEiJ_T0080965.1 MGP_WSBEiJ_G0031004.1 mouse_genomes_project 7 23481774 23487853 + MGP_WSBEiJ_P0080965 Zfp526 protein_coding protein_coding MGP_WSBEiJ_T0010744.1 MGP_WSBEiJ_G0008901.1 mouse_genomes_project 7 132657038 132657163 - Gm24365 miRNA miRNA MGP_WSBEiJ_T0080465.1 MGP_WSBEiJ_G0030857.1 mouse_genomes_project 7 13945351 14011099 - MGP_WSBEiJ_P0080465 Sae1 protein_coding protein_coding MGP_WSBEiJ_T0080095.1 MGP_WSBEiJ_G0030717.1 mouse_genomes_project 7 1618069 1646159 + MGP_WSBEiJ_P0080095 Brsk1 protein_coding protein_coding MGP_WSBEiJ_T0080096.1 MGP_WSBEiJ_G0030717.1 mouse_genomes_project 7 1618393 1646175 + MGP_WSBEiJ_P0080096 Brsk1 protein_coding protein_coding MGP_WSBEiJ_T0080097.1 MGP_WSBEiJ_G0030717.1 mouse_genomes_project 7 1618545 1634991 + MGP_WSBEiJ_P0080097 Brsk1 protein_coding protein_coding MGP_WSBEiJ_T0080098.1 MGP_WSBEiJ_G0030717.1 mouse_genomes_project 7 1619767 1634991 + MGP_WSBEiJ_P0080098 Brsk1 protein_coding protein_coding MGP_WSBEiJ_T0080100.1 MGP_WSBEiJ_G0030717.1 mouse_genomes_project 7 1638554 1640507 + MGP_WSBEiJ_P0080100 Brsk1 protein_coding protein_coding MGP_WSBEiJ_T0082702.1 MGP_WSBEiJ_G0031434.1 mouse_genomes_project 7 47662103 47663119 - MGP_WSBEiJ_P0082702 Mrgpra6 protein_coding protein_coding MGP_WSBEiJ_T0099756.1 MGP_WSBEiJ_G0038419.1 mouse_genomes_project 7 146235055 146235185 - Gm25725 snoRNA snoRNA MGP_WSBEiJ_T0080170.1 MGP_WSBEiJ_G0030741.1 mouse_genomes_project 7 1987265 1991275 - MGP_WSBEiJ_P0080170 Zfp784 protein_coding protein_coding MGP_WSBEiJ_T0083672.1 MGP_WSBEiJ_G0031665.1 mouse_genomes_project 7 99787714 99807365 + MGP_WSBEiJ_P0083672 Kctd21 protein_coding protein_coding MGP_WSBEiJ_T0086000.1 MGP_WSBEiJ_G0032298.1 mouse_genomes_project 7 144731327 144734259 - MGP_WSBEiJ_P0086000 Msx3 protein_coding protein_coding MGP_WSBEiJ_T0086001.1 MGP_WSBEiJ_G0032298.1 mouse_genomes_project 7 144731544 144734258 - MGP_WSBEiJ_P0086001 Msx3 protein_coding protein_coding MGP_WSBEiJ_T0085789.1 MGP_WSBEiJ_G0032245.1 mouse_genomes_project 7 135867490 135875209 + MGP_WSBEiJ_P0085789 Hmx2 protein_coding protein_coding MGP_WSBEiJ_T0085790.1 MGP_WSBEiJ_G0032245.1 mouse_genomes_project 7 135872719 135875209 + MGP_WSBEiJ_P0085790 Hmx2 protein_coding protein_coding MGP_WSBEiJ_T0082678.1 MGP_WSBEiJ_G0031426.1 mouse_genomes_project 7 47294919 47311867 + MGP_WSBEiJ_P0082678 Ldha protein_coding protein_coding MGP_WSBEiJ_T0082679.1 MGP_WSBEiJ_G0031426.1 mouse_genomes_project 7 47300150 47315740 + MGP_WSBEiJ_P0082679 Ldha protein_coding protein_coding MGP_WSBEiJ_T0082680.1 MGP_WSBEiJ_G0031426.1 mouse_genomes_project 7 47300154 47303519 + Ldha protein_coding processed_transcript MGP_WSBEiJ_T0082681.1 MGP_WSBEiJ_G0031426.1 mouse_genomes_project 7 47300154 47302436 + Ldha protein_coding retained_intron MGP_WSBEiJ_T0082682.1 MGP_WSBEiJ_G0031426.1 mouse_genomes_project 7 47300174 47311876 + MGP_WSBEiJ_P0082682 Ldha protein_coding protein_coding MGP_WSBEiJ_T0082683.1 MGP_WSBEiJ_G0031426.1 mouse_genomes_project 7 47300407 47303525 + Ldha protein_coding processed_transcript MGP_WSBEiJ_T0082684.1 MGP_WSBEiJ_G0031426.1 mouse_genomes_project 7 47301436 47315739 + MGP_WSBEiJ_P0082684 Ldha protein_coding protein_coding MGP_WSBEiJ_T0082685.1 MGP_WSBEiJ_G0031426.1 mouse_genomes_project 7 47301810 47310871 + Ldha protein_coding retained_intron MGP_WSBEiJ_T0082405.1 MGP_WSBEiJ_G0031360.1 mouse_genomes_project 7 45500287 45521447 - MGP_WSBEiJ_P0082405 Ccdc155 protein_coding protein_coding MGP_WSBEiJ_T0082406.1 MGP_WSBEiJ_G0031360.1 mouse_genomes_project 7 45500591 45506733 - Ccdc155 protein_coding retained_intron MGP_WSBEiJ_T0082420.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45552795 45558033 - MGP_WSBEiJ_P0082420 Cd37 protein_coding protein_coding MGP_WSBEiJ_T0082421.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45552800 45558008 - Cd37 protein_coding retained_intron MGP_WSBEiJ_T0082422.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45552804 45558308 - MGP_WSBEiJ_P0082422 Cd37 protein_coding protein_coding MGP_WSBEiJ_T0082423.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45552806 45554663 - Cd37 protein_coding processed_transcript MGP_WSBEiJ_T0082424.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45553054 45556251 - Cd37 protein_coding processed_transcript MGP_WSBEiJ_T0082425.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45553333 45558067 - MGP_WSBEiJ_P0082425 Cd37 protein_coding protein_coding MGP_WSBEiJ_T0082426.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45553513 45554622 - Cd37 protein_coding processed_transcript MGP_WSBEiJ_T0082427.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45553901 45558250 - MGP_WSBEiJ_P0082427 Cd37 protein_coding protein_coding MGP_WSBEiJ_T0082428.1 MGP_WSBEiJ_G0031363.1 mouse_genomes_project 7 45556926 45557989 - Cd37 protein_coding retained_intron MGP_WSBEiJ_T0080418.1 MGP_WSBEiJ_G0030848.1 mouse_genomes_project 7 13694573 13696203 + Kptn protein_coding retained_intron MGP_WSBEiJ_T0080419.1 MGP_WSBEiJ_G0030848.1 mouse_genomes_project 7 13694573 13702208 + MGP_WSBEiJ_P0080419 Kptn protein_coding protein_coding MGP_WSBEiJ_T0080420.1 MGP_WSBEiJ_G0030848.1 mouse_genomes_project 7 13694607 13695651 + Kptn protein_coding retained_intron MGP_WSBEiJ_T0080421.1 MGP_WSBEiJ_G0030848.1 mouse_genomes_project 7 13694897 13698544 + Kptn protein_coding retained_intron MGP_WSBEiJ_T0080422.1 MGP_WSBEiJ_G0030848.1 mouse_genomes_project 7 13695129 13695642 + Kptn protein_coding retained_intron MGP_WSBEiJ_T0080423.1 MGP_WSBEiJ_G0030848.1 mouse_genomes_project 7 13697495 13698507 + Kptn protein_coding retained_intron MGP_WSBEiJ_T0080424.1 MGP_WSBEiJ_G0030848.1 mouse_genomes_project 7 13697561 13698686 + Kptn protein_coding retained_intron MGP_WSBEiJ_T0080425.1 MGP_WSBEiJ_G0030848.1 mouse_genomes_project 7 13700094 13702056 + Kptn protein_coding retained_intron MGP_WSBEiJ_T0083729.1 MGP_WSBEiJ_G0031676.1 mouse_genomes_project 7 100410600 100529733 + MGP_WSBEiJ_P0083729 Gdpd4 protein_coding protein_coding MGP_WSBEiJ_T0083730.1 MGP_WSBEiJ_G0031676.1 mouse_genomes_project 7 100437193 100527814 + MGP_WSBEiJ_P0083730 Gdpd4 protein_coding protein_coding MGP_WSBEiJ_T0008826.1 MGP_WSBEiJ_G0007123.1 mouse_genomes_project 7 101052971 101076362 - A630091E08Rik lincRNA lincRNA MGP_WSBEiJ_T0010751.1 MGP_WSBEiJ_G0008908.1 mouse_genomes_project 7 146057503 146057613 - Mir210 miRNA miRNA MGP_WSBEiJ_T0081790.1 MGP_WSBEiJ_G0031204.1 mouse_genomes_project 7 29944398 29955252 - MGP_WSBEiJ_P0081790 Fxyd7 protein_coding protein_coding MGP_WSBEiJ_T0081791.1 MGP_WSBEiJ_G0031204.1 mouse_genomes_project 7 29944398 29955316 - MGP_WSBEiJ_P0081791 Fxyd7 protein_coding protein_coding MGP_WSBEiJ_T0082659.1 MGP_WSBEiJ_G0031423.1 mouse_genomes_project 7 47173803 47177466 - MGP_WSBEiJ_P0082659 Saa1 protein_coding protein_coding MGP_WSBEiJ_T0086053.1 MGP_WSBEiJ_G0032324.1 mouse_genomes_project 7 145425538 145427750 + MGP_WSBEiJ_P0086053 Olfr539 protein_coding protein_coding MGP_WSBEiJ_T0084137.1 MGP_WSBEiJ_G0031791.1 mouse_genomes_project 7 105983619 105984603 + MGP_WSBEiJ_P0084137 Olfr593 protein_coding protein_coding MGP_WSBEiJ_T0098522.1 MGP_WSBEiJ_G0037185.1 mouse_genomes_project 7 143822859 143822959 - Gm27975 snRNA snRNA MGP_WSBEiJ_T0083062.1 MGP_WSBEiJ_G0031516.1 mouse_genomes_project 7 72501123 72503640 - MGP_WSBEiJ_P0083062 Gm10295 protein_coding protein_coding MGP_WSBEiJ_T0002191.1 MGP_WSBEiJ_G0002110.1 mouse_genomes_project 7 56814056 56815795 - TEC TEC MGP_WSBEiJ_T0084623.1 MGP_WSBEiJ_G0032016.1 mouse_genomes_project 7 117146504 117146990 - MGP_WSBEiJ_P0084623 protein_coding protein_coding MGP_WSBEiJ_T0010706.1 MGP_WSBEiJ_G0008863.1 mouse_genomes_project 7 62585397 62585460 - Mir344b miRNA miRNA MGP_WSBEiJ_T0008656.1 MGP_WSBEiJ_G0006998.1 mouse_genomes_project 7 462649 476156 - Gm44920 lincRNA lincRNA MGP_WSBEiJ_T0082136.1 MGP_WSBEiJ_G0031280.1 mouse_genomes_project 7 43699553 43708482 - MGP_WSBEiJ_P0082136 Cd33 protein_coding protein_coding MGP_WSBEiJ_T0082137.1 MGP_WSBEiJ_G0031280.1 mouse_genomes_project 7 43703307 43708412 - MGP_WSBEiJ_P0082137 Cd33 protein_coding protein_coding MGP_WSBEiJ_T0082138.1 MGP_WSBEiJ_G0031280.1 mouse_genomes_project 7 43703686 43719690 - MGP_WSBEiJ_P0082138 Cd33 protein_coding protein_coding MGP_WSBEiJ_T0082139.1 MGP_WSBEiJ_G0031280.1 mouse_genomes_project 7 43703838 43707989 - MGP_WSBEiJ_P0082139 Cd33 protein_coding protein_coding MGP_WSBEiJ_T0082140.1 MGP_WSBEiJ_G0031280.1 mouse_genomes_project 7 43705664 43708398 - Cd33 protein_coding retained_intron MGP_WSBEiJ_T0082141.1 MGP_WSBEiJ_G0031280.1 mouse_genomes_project 7 43707351 43708265 - Cd33 protein_coding processed_transcript MGP_WSBEiJ_T0080265.1 MGP_WSBEiJ_G0030791.1 mouse_genomes_project 7 9137333 9138251 + MGP_WSBEiJ_P0080265 Vmn1r75 protein_coding protein_coding MGP_WSBEiJ_T0082408.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45533399 45552785 + MGP_WSBEiJ_P0082408 Tead2 protein_coding protein_coding MGP_WSBEiJ_T0082409.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45533437 45538573 + Tead2 protein_coding retained_intron MGP_WSBEiJ_T0082410.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45533456 45535853 + Tead2 protein_coding retained_intron MGP_WSBEiJ_T0082411.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45533469 45543446 + MGP_WSBEiJ_P0082411 Tead2 protein_coding protein_coding MGP_WSBEiJ_T0082412.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45533498 45552785 + MGP_WSBEiJ_P0082412 Tead2 protein_coding protein_coding MGP_WSBEiJ_T0082413.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45534319 45536816 + MGP_WSBEiJ_P0082413 Tead2 protein_coding protein_coding MGP_WSBEiJ_T0082414.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45534857 45538626 + Tead2 protein_coding retained_intron MGP_WSBEiJ_T0082415.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45534857 45552799 + MGP_WSBEiJ_P0082415 Tead2 protein_coding protein_coding MGP_WSBEiJ_T0082416.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45535685 45541395 + Tead2 protein_coding processed_transcript MGP_WSBEiJ_T0082417.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45537556 45538354 + Tead2 protein_coding retained_intron MGP_WSBEiJ_T0082418.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45538094 45538849 + Tead2 protein_coding processed_transcript MGP_WSBEiJ_T0082419.1 MGP_WSBEiJ_G0031362.1 mouse_genomes_project 7 45551313 45552252 + Tead2 protein_coding processed_transcript MGP_WSBEiJ_T0082168.1 MGP_WSBEiJ_G0031293.1 mouse_genomes_project 7 43987772 43994028 + MGP_WSBEiJ_P0082168 Klk8 protein_coding protein_coding MGP_WSBEiJ_T0082169.1 MGP_WSBEiJ_G0031293.1 mouse_genomes_project 7 43987791 43993877 + MGP_WSBEiJ_P0082169 Klk8 protein_coding protein_coding MGP_WSBEiJ_T0082170.1 MGP_WSBEiJ_G0031293.1 mouse_genomes_project 7 43992071 43994032 + Klk8 protein_coding retained_intron MGP_WSBEiJ_T0086186.1 MGP_WSBEiJ_G0032361.1 mouse_genomes_project 7 146139125 146170026 - MGP_WSBEiJ_P0086186 Deaf1 protein_coding protein_coding MGP_WSBEiJ_T0086187.1 MGP_WSBEiJ_G0032361.1 mouse_genomes_project 7 146139135 146166776 - MGP_WSBEiJ_P0086187 Deaf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084953.1 MGP_WSBEiJ_G0032094.1 mouse_genomes_project 7 126062592 126065928 + MGP_WSBEiJ_P0084953 Chp2 protein_coding protein_coding MGP_WSBEiJ_T0084954.1 MGP_WSBEiJ_G0032094.1 mouse_genomes_project 7 126064676 126065287 + Chp2 protein_coding processed_transcript MGP_WSBEiJ_T0015325.1 MGP_WSBEiJ_G0013455.1 mouse_genomes_project 7 66086617 66087191 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010708.1 MGP_WSBEiJ_G0008865.1 mouse_genomes_project 7 62677260 62677355 - Mir344 miRNA miRNA MGP_WSBEiJ_T0008725.1 MGP_WSBEiJ_G0007054.1 mouse_genomes_project 7 44721323 44722211 + Gm45123 lincRNA lincRNA MGP_WSBEiJ_T0002239.1 MGP_WSBEiJ_G0002157.1 mouse_genomes_project 7 81771752 81774280 + TEC TEC MGP_WSBEiJ_T0015233.1 MGP_WSBEiJ_G0013363.1 mouse_genomes_project 7 13471906 13472866 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084164.1 MGP_WSBEiJ_G0031818.1 mouse_genomes_project 7 106611488 106612554 - MGP_WSBEiJ_P0084164 Olfr630 protein_coding protein_coding MGP_WSBEiJ_T0084411.1 MGP_WSBEiJ_G0031944.1 mouse_genomes_project 7 111099601 111100534 + MGP_WSBEiJ_P0084411 Olfr473 protein_coding protein_coding MGP_WSBEiJ_T0081165.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25856307 25871620 - MGP_WSBEiJ_P0081165 Shkbp1 protein_coding protein_coding MGP_WSBEiJ_T0081166.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25856311 25871555 - Shkbp1 protein_coding retained_intron MGP_WSBEiJ_T0081167.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25856311 25871344 - Shkbp1 protein_coding retained_intron MGP_WSBEiJ_T0081168.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25856312 25859809 - Shkbp1 protein_coding processed_transcript MGP_WSBEiJ_T0081169.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25856586 25857096 - Shkbp1 protein_coding retained_intron MGP_WSBEiJ_T0081170.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25857322 25863053 - Shkbp1 protein_coding processed_transcript MGP_WSBEiJ_T0081171.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25859185 25862080 - Shkbp1 protein_coding retained_intron MGP_WSBEiJ_T0081172.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25862725 25866415 - Shkbp1 protein_coding retained_intron MGP_WSBEiJ_T0081173.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25867320 25871360 - Shkbp1 protein_coding retained_intron MGP_WSBEiJ_T0081174.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25867361 25871523 - Shkbp1 protein_coding processed_transcript MGP_WSBEiJ_T0081176.1 MGP_WSBEiJ_G0031057.1 mouse_genomes_project 7 25869679 25871372 - Shkbp1 protein_coding retained_intron MGP_WSBEiJ_T0015332.1 MGP_WSBEiJ_G0013462.1 mouse_genomes_project 7 73913672 73914660 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080814.1 MGP_WSBEiJ_G0030968.1 mouse_genomes_project 7 22342916 22353078 - MGP_WSBEiJ_P0080814 Zfp109 protein_coding protein_coding MGP_WSBEiJ_T0080834.1 MGP_WSBEiJ_G0030973.1 mouse_genomes_project 7 22460632 22461487 - MGP_WSBEiJ_P0080834 Tescl protein_coding protein_coding MGP_WSBEiJ_T0084132.1 MGP_WSBEiJ_G0031787.1 mouse_genomes_project 7 105900096 105901050 - MGP_WSBEiJ_P0084132 Olfr586 protein_coding protein_coding MGP_WSBEiJ_T0080388.1 MGP_WSBEiJ_G0030836.1 mouse_genomes_project 7 11868065 11900213 - MGP_WSBEiJ_P0080388 Sult2a7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0080389.1 MGP_WSBEiJ_G0030836.1 mouse_genomes_project 7 11868182 11901213 - MGP_WSBEiJ_P0080389 Sult2a7 protein_coding protein_coding MGP_WSBEiJ_T0085398.1 MGP_WSBEiJ_G0032170.1 mouse_genomes_project 7 131372530 131430693 + MGP_WSBEiJ_P0085398 Itgal protein_coding protein_coding MGP_WSBEiJ_T0085399.1 MGP_WSBEiJ_G0032170.1 mouse_genomes_project 7 131372561 131430694 + MGP_WSBEiJ_P0085399 Itgal protein_coding protein_coding MGP_WSBEiJ_T0085400.1 MGP_WSBEiJ_G0032170.1 mouse_genomes_project 7 131372585 131425366 + MGP_WSBEiJ_P0085400 Itgal protein_coding protein_coding MGP_WSBEiJ_T0085401.1 MGP_WSBEiJ_G0032170.1 mouse_genomes_project 7 131372680 131429285 + MGP_WSBEiJ_P0085401 Itgal protein_coding protein_coding MGP_WSBEiJ_T0085402.1 MGP_WSBEiJ_G0032170.1 mouse_genomes_project 7 131373700 131375844 + Itgal protein_coding processed_transcript MGP_WSBEiJ_T0085403.1 MGP_WSBEiJ_G0032170.1 mouse_genomes_project 7 131398866 131430693 + MGP_WSBEiJ_P0085403 Itgal protein_coding protein_coding MGP_WSBEiJ_T0015217.1 MGP_WSBEiJ_G0013347.1 mouse_genomes_project 7 3568137 3568347 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084123.1 MGP_WSBEiJ_G0031779.1 mouse_genomes_project 7 105741584 105742541 - MGP_WSBEiJ_P0084123 Olfr575 protein_coding protein_coding MGP_WSBEiJ_T0082449.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45704912 45724076 - MGP_WSBEiJ_P0082449 Snrnp70 protein_coding protein_coding MGP_WSBEiJ_T0082450.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45704918 45712355 - MGP_WSBEiJ_P0082450 Snrnp70 protein_coding protein_coding MGP_WSBEiJ_T0082451.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45704921 45723992 - Snrnp70 protein_coding retained_intron MGP_WSBEiJ_T0082452.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45704922 45724026 - Snrnp70 protein_coding retained_intron MGP_WSBEiJ_T0082453.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45705606 45720619 - MGP_WSBEiJ_P0082453 Snrnp70 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082454.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45709820 45712744 - Snrnp70 protein_coding retained_intron MGP_WSBEiJ_T0082455.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45712009 45723133 - Snrnp70 protein_coding retained_intron MGP_WSBEiJ_T0082456.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45712177 45716066 - Snrnp70 protein_coding retained_intron MGP_WSBEiJ_T0082457.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45712227 45723506 - MGP_WSBEiJ_P0082457 Snrnp70 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082458.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45712242 45723528 - MGP_WSBEiJ_P0082458 Snrnp70 protein_coding protein_coding MGP_WSBEiJ_T0082459.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45715244 45723053 - Snrnp70 protein_coding retained_intron MGP_WSBEiJ_T0082460.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45715685 45724043 - MGP_WSBEiJ_P0082460 Snrnp70 protein_coding protein_coding MGP_WSBEiJ_T0082461.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45715729 45721076 - Snrnp70 protein_coding processed_transcript MGP_WSBEiJ_T0082462.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45719298 45721181 - Snrnp70 protein_coding retained_intron MGP_WSBEiJ_T0082463.1 MGP_WSBEiJ_G0031369.1 mouse_genomes_project 7 45720121 45723891 - Snrnp70 protein_coding retained_intron MGP_WSBEiJ_T0083274.1 MGP_WSBEiJ_G0031557.1 mouse_genomes_project 7 81830722 81834879 + MGP_WSBEiJ_P0083274 Ngrn protein_coding protein_coding MGP_WSBEiJ_T0083275.1 MGP_WSBEiJ_G0031557.1 mouse_genomes_project 7 81830727 81834879 + Ngrn protein_coding retained_intron MGP_WSBEiJ_T0086310.1 MGP_WSBEiJ_G0032380.1 mouse_genomes_project 7 146741382 146770021 - MGP_WSBEiJ_P0086310 Tollip protein_coding protein_coding MGP_WSBEiJ_T0086311.1 MGP_WSBEiJ_G0032380.1 mouse_genomes_project 7 146751111 146769914 - MGP_WSBEiJ_P0086311 Tollip protein_coding protein_coding MGP_WSBEiJ_T0086312.1 MGP_WSBEiJ_G0032380.1 mouse_genomes_project 7 146759611 146770029 - MGP_WSBEiJ_P0086312 Tollip protein_coding protein_coding MGP_WSBEiJ_T0015387.1 MGP_WSBEiJ_G0013517.1 mouse_genomes_project 7 109464138 109465176 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101020.1 MGP_WSBEiJ_G0039477.1 mouse_genomes_project 7 32837427 32837797 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008685.1 MGP_WSBEiJ_G0007024.1 mouse_genomes_project 7 33732120 33818951 + Gm12766 lincRNA lincRNA MGP_WSBEiJ_T0080409.1 MGP_WSBEiJ_G0030845.1 mouse_genomes_project 7 13541938 13569797 - MGP_WSBEiJ_P0080409 Gltscr1 protein_coding protein_coding MGP_WSBEiJ_T0081971.1 MGP_WSBEiJ_G0031239.1 mouse_genomes_project 7 34851286 34929481 - MGP_WSBEiJ_P0081971 protein_coding protein_coding MGP_WSBEiJ_T0081972.1 MGP_WSBEiJ_G0031239.1 mouse_genomes_project 7 34853379 34929482 - MGP_WSBEiJ_P0081972 protein_coding protein_coding MGP_WSBEiJ_T0081973.1 MGP_WSBEiJ_G0031239.1 mouse_genomes_project 7 34877051 34929637 - MGP_WSBEiJ_P0081973 protein_coding protein_coding MGP_WSBEiJ_T0081974.1 MGP_WSBEiJ_G0031239.1 mouse_genomes_project 7 34877054 34929689 - MGP_WSBEiJ_P0081974 protein_coding protein_coding MGP_WSBEiJ_T0081975.1 MGP_WSBEiJ_G0031239.1 mouse_genomes_project 7 34877083 34889832 - MGP_WSBEiJ_P0081975 protein_coding protein_coding MGP_WSBEiJ_T0081976.1 MGP_WSBEiJ_G0031239.1 mouse_genomes_project 7 34895635 34929637 - MGP_WSBEiJ_P0081976 protein_coding protein_coding MGP_WSBEiJ_T0005150.1 MGP_WSBEiJ_G0004378.1 mouse_genomes_project 7 80016984 80019193 + Gm9885 antisense antisense MGP_WSBEiJ_T0005151.1 MGP_WSBEiJ_G0004378.1 mouse_genomes_project 7 80016984 80019189 + Gm9885 antisense antisense MGP_WSBEiJ_T0081224.1 MGP_WSBEiJ_G0031069.1 mouse_genomes_project 7 26198606 26229860 - MGP_WSBEiJ_P0081224 Map3k10 protein_coding protein_coding MGP_WSBEiJ_T0081225.1 MGP_WSBEiJ_G0031069.1 mouse_genomes_project 7 26198895 26229864 - MGP_WSBEiJ_P0081225 Map3k10 protein_coding protein_coding MGP_WSBEiJ_T0081226.1 MGP_WSBEiJ_G0031069.1 mouse_genomes_project 7 26209706 26210656 - Map3k10 protein_coding retained_intron MGP_WSBEiJ_T0081227.1 MGP_WSBEiJ_G0031069.1 mouse_genomes_project 7 26209728 26229623 - Map3k10 protein_coding retained_intron MGP_WSBEiJ_T0081228.1 MGP_WSBEiJ_G0031069.1 mouse_genomes_project 7 26213683 26229847 - MGP_WSBEiJ_P0081228 Map3k10 protein_coding protein_coding MGP_WSBEiJ_T0017828.1 MGP_WSBEiJ_G0015118.1 mouse_genomes_project 7 138659433 138662657 - A130023I24Rik processed_transcript sense_intronic MGP_WSBEiJ_T0017829.1 MGP_WSBEiJ_G0015118.1 mouse_genomes_project 7 138659512 138661279 - A130023I24Rik processed_transcript retained_intron MGP_WSBEiJ_T0008740.1 MGP_WSBEiJ_G0007066.1 mouse_genomes_project 7 66490062 66525685 + BC046251 lincRNA lincRNA MGP_WSBEiJ_T0098514.1 MGP_WSBEiJ_G0037177.1 mouse_genomes_project 7 130589000 130589107 - Gm24596 snRNA snRNA MGP_WSBEiJ_T0015266.1 MGP_WSBEiJ_G0013396.1 mouse_genomes_project 7 33007468 33008195 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080321.1 MGP_WSBEiJ_G0030814.1 mouse_genomes_project 7 10296931 10301994 - MGP_WSBEiJ_P0080321 Zbtb45 protein_coding protein_coding MGP_WSBEiJ_T0080322.1 MGP_WSBEiJ_G0030814.1 mouse_genomes_project 7 10297792 10301972 - MGP_WSBEiJ_P0080322 Zbtb45 protein_coding protein_coding MGP_WSBEiJ_T0084448.1 MGP_WSBEiJ_G0031977.1 mouse_genomes_project 7 112265873 112315072 - MGP_WSBEiJ_P0084448 Ric3 protein_coding protein_coding MGP_WSBEiJ_T0084449.1 MGP_WSBEiJ_G0031977.1 mouse_genomes_project 7 112265873 112290100 - MGP_WSBEiJ_P0084449 Ric3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084450.1 MGP_WSBEiJ_G0031977.1 mouse_genomes_project 7 112269529 112315063 - MGP_WSBEiJ_P0084450 Ric3 protein_coding protein_coding MGP_WSBEiJ_T0084451.1 MGP_WSBEiJ_G0031977.1 mouse_genomes_project 7 112276929 112315052 - Ric3 protein_coding retained_intron MGP_WSBEiJ_T0084452.1 MGP_WSBEiJ_G0031977.1 mouse_genomes_project 7 112289762 112315063 - Ric3 protein_coding retained_intron MGP_WSBEiJ_T0084453.1 MGP_WSBEiJ_G0031977.1 mouse_genomes_project 7 112312481 112315046 - Ric3 protein_coding processed_transcript MGP_WSBEiJ_T0085617.1 MGP_WSBEiJ_G0032215.1 mouse_genomes_project 7 132398786 132399541 + Armc5 protein_coding processed_transcript MGP_WSBEiJ_T0085618.1 MGP_WSBEiJ_G0032215.1 mouse_genomes_project 7 132398801 132407606 + MGP_WSBEiJ_P0085618 Armc5 protein_coding protein_coding MGP_WSBEiJ_T0099741.1 MGP_WSBEiJ_G0038404.1 mouse_genomes_project 7 112780596 112780726 + Gm24888 snoRNA snoRNA MGP_WSBEiJ_T0101010.1 MGP_WSBEiJ_G0039467.1 mouse_genomes_project 7 24655387 24655934 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082298.1 MGP_WSBEiJ_G0031327.1 mouse_genomes_project 7 44973835 44985408 + MGP_WSBEiJ_P0082298 Izumo2 protein_coding protein_coding MGP_WSBEiJ_T0098496.1 MGP_WSBEiJ_G0037159.1 mouse_genomes_project 7 93988418 93988563 - Gm23928 snRNA snRNA MGP_WSBEiJ_T0083471.1 MGP_WSBEiJ_G0031592.1 mouse_genomes_project 7 84371343 84390397 - MGP_WSBEiJ_P0083471 Saxo2 protein_coding protein_coding MGP_WSBEiJ_T0083472.1 MGP_WSBEiJ_G0031592.1 mouse_genomes_project 7 84372786 84390309 - MGP_WSBEiJ_P0083472 Saxo2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083473.1 MGP_WSBEiJ_G0031592.1 mouse_genomes_project 7 84373610 84390397 - Saxo2 protein_coding processed_transcript MGP_WSBEiJ_T0083474.1 MGP_WSBEiJ_G0031592.1 mouse_genomes_project 7 84384036 84390402 - Saxo2 protein_coding retained_intron MGP_WSBEiJ_T0083475.1 MGP_WSBEiJ_G0031592.1 mouse_genomes_project 7 84388056 84390402 - Saxo2 protein_coding processed_transcript MGP_WSBEiJ_T0097095.1 MGP_WSBEiJ_G0035776.1 mouse_genomes_project 7 34446591 34446710 + Gm22535 rRNA rRNA MGP_WSBEiJ_T0082199.1 MGP_WSBEiJ_G0031308.1 mouse_genomes_project 7 44476486 44481555 - MGP_WSBEiJ_P0082199 Acpt protein_coding protein_coding MGP_WSBEiJ_T0082200.1 MGP_WSBEiJ_G0031308.1 mouse_genomes_project 7 44477243 44481555 - MGP_WSBEiJ_P0082200 Acpt protein_coding protein_coding MGP_WSBEiJ_T0082201.1 MGP_WSBEiJ_G0031308.1 mouse_genomes_project 7 44477250 44481382 - MGP_WSBEiJ_P0082201 Acpt protein_coding protein_coding MGP_WSBEiJ_T0083055.1 MGP_WSBEiJ_G0031512.1 mouse_genomes_project 7 68941795 69223949 + MGP_WSBEiJ_P0083055 Igf1r protein_coding protein_coding MGP_WSBEiJ_T0015341.1 MGP_WSBEiJ_G0013471.1 mouse_genomes_project 7 78700608 78701111 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015408.1 MGP_WSBEiJ_G0013538.1 mouse_genomes_project 7 130794669 130795031 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080777.1 MGP_WSBEiJ_G0030952.1 mouse_genomes_project 7 21432893 21439589 + protein_coding processed_transcript MGP_WSBEiJ_T0100965.1 MGP_WSBEiJ_G0039422.1 mouse_genomes_project 7 7894014 7894876 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084570.1 MGP_WSBEiJ_G0032004.1 mouse_genomes_project 7 114838964 115158141 - MGP_WSBEiJ_P0084570 Galnt18 protein_coding protein_coding MGP_WSBEiJ_T0084571.1 MGP_WSBEiJ_G0032004.1 mouse_genomes_project 7 114838964 115158141 - MGP_WSBEiJ_P0084571 Galnt18 protein_coding protein_coding MGP_WSBEiJ_T0010720.1 MGP_WSBEiJ_G0008877.1 mouse_genomes_project 7 80344978 80345075 + Mir7-2 miRNA miRNA MGP_WSBEiJ_T0083617.1 MGP_WSBEiJ_G0031653.1 mouse_genomes_project 7 92732592 92740417 - MGP_WSBEiJ_P0083617 Tmem126b protein_coding protein_coding MGP_WSBEiJ_T0083618.1 MGP_WSBEiJ_G0031653.1 mouse_genomes_project 7 92734331 92740411 - Tmem126b protein_coding retained_intron MGP_WSBEiJ_T0084484.1 MGP_WSBEiJ_G0031988.1 mouse_genomes_project 7 113070574 113140473 - MGP_WSBEiJ_P0084484 Scube2 protein_coding protein_coding MGP_WSBEiJ_T0084485.1 MGP_WSBEiJ_G0031988.1 mouse_genomes_project 7 113070588 113140566 - MGP_WSBEiJ_P0084485 Scube2 protein_coding protein_coding MGP_WSBEiJ_T0084486.1 MGP_WSBEiJ_G0031988.1 mouse_genomes_project 7 113070733 113140530 - MGP_WSBEiJ_P0084486 Scube2 protein_coding protein_coding MGP_WSBEiJ_T0084487.1 MGP_WSBEiJ_G0031988.1 mouse_genomes_project 7 113070989 113114970 - Scube2 protein_coding processed_transcript MGP_WSBEiJ_T0084488.1 MGP_WSBEiJ_G0031988.1 mouse_genomes_project 7 113072546 113080132 - Scube2 protein_coding processed_transcript MGP_WSBEiJ_T0017807.1 MGP_WSBEiJ_G0015106.1 mouse_genomes_project 7 116010624 116081510 - 2310014F06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0100996.1 MGP_WSBEiJ_G0039453.1 mouse_genomes_project 7 12317962 12318227 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082823.1 MGP_WSBEiJ_G0031466.1 mouse_genomes_project 7 56859958 56908545 - MGP_WSBEiJ_P0082823 Nipa1 protein_coding protein_coding MGP_WSBEiJ_T0084628.1 MGP_WSBEiJ_G0032020.1 mouse_genomes_project 7 117722709 117735455 - MGP_WSBEiJ_P0084628 Psma1 protein_coding protein_coding MGP_WSBEiJ_T0084629.1 MGP_WSBEiJ_G0032020.1 mouse_genomes_project 7 117722899 117735363 - Psma1 protein_coding processed_transcript MGP_WSBEiJ_T0084630.1 MGP_WSBEiJ_G0032020.1 mouse_genomes_project 7 117728611 117735391 - Psma1 protein_coding retained_intron MGP_WSBEiJ_T0084631.1 MGP_WSBEiJ_G0032020.1 mouse_genomes_project 7 117733138 117735380 - Psma1 protein_coding retained_intron MGP_WSBEiJ_T0082871.1 MGP_WSBEiJ_G0031477.1 mouse_genomes_project 7 63186360 63188012 + MGP_WSBEiJ_P0082871 Ndn protein_coding protein_coding MGP_WSBEiJ_T0085528.1 MGP_WSBEiJ_G0032195.1 mouse_genomes_project 7 131927055 131952426 - MGP_WSBEiJ_P0085528 Stx1b protein_coding protein_coding MGP_WSBEiJ_T0085529.1 MGP_WSBEiJ_G0032195.1 mouse_genomes_project 7 131930519 131934067 - MGP_WSBEiJ_P0085529 Stx1b protein_coding protein_coding MGP_WSBEiJ_T0101061.1 MGP_WSBEiJ_G0039518.1 mouse_genomes_project 7 48936984 48938332 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081229.1 MGP_WSBEiJ_G0031070.1 mouse_genomes_project 7 26245259 26277155 + MGP_WSBEiJ_P0081229 Zfp607b protein_coding protein_coding MGP_WSBEiJ_T0080284.1 MGP_WSBEiJ_G0030804.1 mouse_genomes_project 7 10029175 10041684 - MGP_WSBEiJ_P0080284 Zscan18 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081392.1 MGP_WSBEiJ_G0031118.1 mouse_genomes_project 7 27722662 27761792 - MGP_WSBEiJ_P0081392 Ryr1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081393.1 MGP_WSBEiJ_G0031118.1 mouse_genomes_project 7 27722663 27849593 - MGP_WSBEiJ_P0081393 Ryr1 protein_coding protein_coding MGP_WSBEiJ_T0081394.1 MGP_WSBEiJ_G0031118.1 mouse_genomes_project 7 27722667 27849593 - MGP_WSBEiJ_P0081394 Ryr1 protein_coding protein_coding MGP_WSBEiJ_T0081395.1 MGP_WSBEiJ_G0031118.1 mouse_genomes_project 7 27762423 27849457 - MGP_WSBEiJ_P0081395 Ryr1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081396.1 MGP_WSBEiJ_G0031118.1 mouse_genomes_project 7 27762423 27849457 - MGP_WSBEiJ_P0081396 Ryr1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0011480.1 MGP_WSBEiJ_G0009637.1 mouse_genomes_project 7 24224468 24224575 + Gm23921 misc_RNA misc_RNA MGP_WSBEiJ_T0086188.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146170039 146175617 + Tmem80 protein_coding processed_transcript MGP_WSBEiJ_T0086189.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146170188 146179582 + MGP_WSBEiJ_P0086189 Tmem80 protein_coding protein_coding MGP_WSBEiJ_T0086190.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146170188 146178643 + MGP_WSBEiJ_P0086190 Tmem80 protein_coding protein_coding MGP_WSBEiJ_T0086191.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146170430 146179237 + MGP_WSBEiJ_P0086191 Tmem80 protein_coding protein_coding MGP_WSBEiJ_T0086192.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146170430 146179582 + MGP_WSBEiJ_P0086192 Tmem80 protein_coding protein_coding MGP_WSBEiJ_T0086193.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146170460 146175658 + Tmem80 protein_coding processed_transcript MGP_WSBEiJ_T0086194.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146175644 146179239 + MGP_WSBEiJ_P0086194 Tmem80 protein_coding protein_coding MGP_WSBEiJ_T0086195.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146175711 146178493 + MGP_WSBEiJ_P0086195 Tmem80 protein_coding protein_coding MGP_WSBEiJ_T0086196.1 MGP_WSBEiJ_G0032362.1 mouse_genomes_project 7 146175988 146178573 + Tmem80 protein_coding retained_intron MGP_WSBEiJ_T0008745.1 MGP_WSBEiJ_G0007070.1 mouse_genomes_project 7 68769100 68788709 - 4833412C05Rik lincRNA lincRNA MGP_WSBEiJ_T0002192.1 MGP_WSBEiJ_G0002111.1 mouse_genomes_project 7 56855041 56856368 - TEC TEC MGP_WSBEiJ_T0080381.1 MGP_WSBEiJ_G0030832.1 mouse_genomes_project 7 11427517 11450572 - MGP_WSBEiJ_P0080381 protein_coding protein_coding MGP_WSBEiJ_T0010650.1 MGP_WSBEiJ_G0008807.1 mouse_genomes_project 7 98246 98308 - Mir292b miRNA miRNA MGP_WSBEiJ_T0080841.1 MGP_WSBEiJ_G0030976.1 mouse_genomes_project 7 22536219 22544819 + Smg9 protein_coding retained_intron MGP_WSBEiJ_T0080842.1 MGP_WSBEiJ_G0030976.1 mouse_genomes_project 7 22536219 22559242 + MGP_WSBEiJ_P0080842 Smg9 protein_coding protein_coding MGP_WSBEiJ_T0080843.1 MGP_WSBEiJ_G0030976.1 mouse_genomes_project 7 22536324 22542397 + Smg9 protein_coding retained_intron MGP_WSBEiJ_T0080844.1 MGP_WSBEiJ_G0030976.1 mouse_genomes_project 7 22536521 22544109 + MGP_WSBEiJ_P0080844 Smg9 protein_coding protein_coding MGP_WSBEiJ_T0080845.1 MGP_WSBEiJ_G0030976.1 mouse_genomes_project 7 22551244 22557394 + Smg9 protein_coding retained_intron MGP_WSBEiJ_T0080846.1 MGP_WSBEiJ_G0030976.1 mouse_genomes_project 7 22551486 22557394 + MGP_WSBEiJ_P0080846 Smg9 protein_coding protein_coding MGP_WSBEiJ_T0080847.1 MGP_WSBEiJ_G0030976.1 mouse_genomes_project 7 22556670 22559103 + Smg9 protein_coding retained_intron MGP_WSBEiJ_T0008842.1 MGP_WSBEiJ_G0007133.1 mouse_genomes_project 7 117778184 117877698 - 4933406I18Rik lincRNA lincRNA MGP_WSBEiJ_T0008843.1 MGP_WSBEiJ_G0007133.1 mouse_genomes_project 7 117817987 117877558 - 4933406I18Rik lincRNA lincRNA MGP_WSBEiJ_T0082297.1 MGP_WSBEiJ_G0031326.1 mouse_genomes_project 7 44937322 44938593 + MGP_WSBEiJ_P0082297 protein_coding protein_coding MGP_WSBEiJ_T0084785.1 MGP_WSBEiJ_G0032046.1 mouse_genomes_project 7 122668580 122691705 - MGP_WSBEiJ_P0084785 Gprc5b protein_coding protein_coding MGP_WSBEiJ_T0080176.1 MGP_WSBEiJ_G0030746.1 mouse_genomes_project 7 2035014 2054214 + MGP_WSBEiJ_P0080176 Epn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0080177.1 MGP_WSBEiJ_G0030746.1 mouse_genomes_project 7 2035083 2054206 + MGP_WSBEiJ_P0080177 Epn1 protein_coding protein_coding MGP_WSBEiJ_T0080178.1 MGP_WSBEiJ_G0030746.1 mouse_genomes_project 7 2035088 2045004 + MGP_WSBEiJ_P0080178 Epn1 protein_coding protein_coding MGP_WSBEiJ_T0080179.1 MGP_WSBEiJ_G0030746.1 mouse_genomes_project 7 2035116 2038945 + MGP_WSBEiJ_P0080179 Epn1 protein_coding protein_coding MGP_WSBEiJ_T0080180.1 MGP_WSBEiJ_G0030746.1 mouse_genomes_project 7 2035141 2054204 + MGP_WSBEiJ_P0080180 Epn1 protein_coding protein_coding MGP_WSBEiJ_T0080181.1 MGP_WSBEiJ_G0030746.1 mouse_genomes_project 7 2038693 2050206 + Epn1 protein_coding processed_transcript MGP_WSBEiJ_T0080182.1 MGP_WSBEiJ_G0030746.1 mouse_genomes_project 7 2044880 2047982 + Epn1 protein_coding retained_intron MGP_WSBEiJ_T0083794.1 MGP_WSBEiJ_G0031691.1 mouse_genomes_project 7 101815605 101888786 + MGP_WSBEiJ_P0083794 Map6 protein_coding protein_coding MGP_WSBEiJ_T0083795.1 MGP_WSBEiJ_G0031691.1 mouse_genomes_project 7 101815605 101888786 + MGP_WSBEiJ_P0083795 Map6 protein_coding protein_coding MGP_WSBEiJ_T0083796.1 MGP_WSBEiJ_G0031691.1 mouse_genomes_project 7 101815647 101872165 + Map6 protein_coding retained_intron MGP_WSBEiJ_T0083797.1 MGP_WSBEiJ_G0031691.1 mouse_genomes_project 7 101816504 101888787 + MGP_WSBEiJ_P0083797 Map6 protein_coding protein_coding MGP_WSBEiJ_T0083798.1 MGP_WSBEiJ_G0031691.1 mouse_genomes_project 7 101873080 101874336 + Map6 protein_coding processed_transcript MGP_WSBEiJ_T0010676.1 MGP_WSBEiJ_G0008833.1 mouse_genomes_project 7 28557868 28557951 + Mir1964 miRNA miRNA MGP_WSBEiJ_T0082190.1 MGP_WSBEiJ_G0031305.1 mouse_genomes_project 7 44189954 44192008 + MGP_WSBEiJ_P0082190 protein_coding protein_coding MGP_WSBEiJ_T0017733.1 MGP_WSBEiJ_G0015077.1 mouse_genomes_project 7 23041572 23065301 + Gm5893 processed_transcript processed_transcript MGP_WSBEiJ_T0017734.1 MGP_WSBEiJ_G0015077.1 mouse_genomes_project 7 23041572 23065318 + Gm5893 processed_transcript lincRNA MGP_WSBEiJ_T0017735.1 MGP_WSBEiJ_G0015077.1 mouse_genomes_project 7 23044885 23048637 + Gm5893 processed_transcript retained_intron MGP_WSBEiJ_T0085791.1 MGP_WSBEiJ_G0032246.1 mouse_genomes_project 7 135880499 135891943 + MGP_WSBEiJ_P0085791 Bub3 protein_coding protein_coding MGP_WSBEiJ_T0008756.1 MGP_WSBEiJ_G0007076.1 mouse_genomes_project 7 72365452 72372776 + 6030442E23Rik lincRNA lincRNA MGP_WSBEiJ_T0008668.1 MGP_WSBEiJ_G0007008.1 mouse_genomes_project 7 17741121 17746105 + Gm26600 lincRNA lincRNA MGP_WSBEiJ_T0084143.1 MGP_WSBEiJ_G0031797.1 mouse_genomes_project 7 106235994 106236939 - MGP_WSBEiJ_P0084143 protein_coding protein_coding MGP_WSBEiJ_T0086488.1 MGP_WSBEiJ_G0032412.1 mouse_genomes_project 7 148650069 148663755 - MGP_WSBEiJ_P0086488 Tnfrsf23 protein_coding protein_coding MGP_WSBEiJ_T0082142.1 MGP_WSBEiJ_G0031281.1 mouse_genomes_project 7 43734104 43751619 + MGP_WSBEiJ_P0082142 Zfp658 protein_coding protein_coding MGP_WSBEiJ_T0082143.1 MGP_WSBEiJ_G0031281.1 mouse_genomes_project 7 43736632 43751124 + MGP_WSBEiJ_P0082143 Zfp658 protein_coding protein_coding MGP_WSBEiJ_T0080267.1 MGP_WSBEiJ_G0030793.1 mouse_genomes_project 7 9424156 9425098 + MGP_WSBEiJ_P0080267 Vmn1r78 protein_coding protein_coding MGP_WSBEiJ_T0082390.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45455150 45470173 - Aldh16a1 protein_coding retained_intron MGP_WSBEiJ_T0082391.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45455371 45470220 - MGP_WSBEiJ_P0082391 Aldh16a1 protein_coding protein_coding MGP_WSBEiJ_T0082392.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45456300 45459155 - MGP_WSBEiJ_P0082392 Aldh16a1 protein_coding protein_coding MGP_WSBEiJ_T0082393.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45456910 45470231 - MGP_WSBEiJ_P0082393 Aldh16a1 protein_coding protein_coding MGP_WSBEiJ_T0082394.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45457244 45459189 - Aldh16a1 protein_coding processed_transcript MGP_WSBEiJ_T0082395.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45459517 45460500 - Aldh16a1 protein_coding retained_intron MGP_WSBEiJ_T0082396.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45461863 45470137 - Aldh16a1 protein_coding processed_transcript MGP_WSBEiJ_T0082397.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45461924 45470094 - Aldh16a1 protein_coding processed_transcript MGP_WSBEiJ_T0082398.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45462003 45462316 - Aldh16a1 protein_coding processed_transcript MGP_WSBEiJ_T0082399.1 MGP_WSBEiJ_G0031355.1 mouse_genomes_project 7 45462348 45463645 - Aldh16a1 protein_coding retained_intron MGP_WSBEiJ_T0080151.1 MGP_WSBEiJ_G0030733.1 mouse_genomes_project 7 1907757 1915861 - MGP_WSBEiJ_P0080151 Sbk2 protein_coding protein_coding MGP_WSBEiJ_T0080152.1 MGP_WSBEiJ_G0030733.1 mouse_genomes_project 7 1908704 1915864 - MGP_WSBEiJ_P0080152 Sbk2 protein_coding protein_coding MGP_WSBEiJ_T0080153.1 MGP_WSBEiJ_G0030733.1 mouse_genomes_project 7 1909145 1915870 - MGP_WSBEiJ_P0080153 Sbk2 protein_coding protein_coding MGP_WSBEiJ_T0080154.1 MGP_WSBEiJ_G0030733.1 mouse_genomes_project 7 1912596 1915906 - Sbk2 protein_coding processed_transcript MGP_WSBEiJ_T0080880.1 MGP_WSBEiJ_G0030984.1 mouse_genomes_project 7 22733458 22737085 - MGP_WSBEiJ_P0080880 Zfp575 protein_coding protein_coding MGP_WSBEiJ_T0101114.1 MGP_WSBEiJ_G0039571.1 mouse_genomes_project 7 107086798 107087794 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008876.1 MGP_WSBEiJ_G0007155.1 mouse_genomes_project 7 131025640 131029433 - lincRNA lincRNA MGP_WSBEiJ_T0008877.1 MGP_WSBEiJ_G0007155.1 mouse_genomes_project 7 131026543 131029742 - lincRNA lincRNA MGP_WSBEiJ_T0008878.1 MGP_WSBEiJ_G0007155.1 mouse_genomes_project 7 131026543 131030021 - lincRNA lincRNA MGP_WSBEiJ_T0008879.1 MGP_WSBEiJ_G0007155.1 mouse_genomes_project 7 131026543 131029760 - lincRNA lincRNA MGP_WSBEiJ_T0008880.1 MGP_WSBEiJ_G0007155.1 mouse_genomes_project 7 131026544 131029711 - lincRNA lincRNA MGP_WSBEiJ_T0008881.1 MGP_WSBEiJ_G0007155.1 mouse_genomes_project 7 131026545 131029769 - lincRNA lincRNA MGP_WSBEiJ_T0008882.1 MGP_WSBEiJ_G0007155.1 mouse_genomes_project 7 131028776 131029975 - lincRNA lincRNA MGP_WSBEiJ_T0008718.1 MGP_WSBEiJ_G0007049.1 mouse_genomes_project 7 43685312 43690468 - Gm2511 lincRNA lincRNA MGP_WSBEiJ_T0008719.1 MGP_WSBEiJ_G0007049.1 mouse_genomes_project 7 43685315 43693122 - Gm2511 lincRNA lincRNA MGP_WSBEiJ_T0008720.1 MGP_WSBEiJ_G0007049.1 mouse_genomes_project 7 43689725 43692706 - Gm2511 lincRNA lincRNA MGP_WSBEiJ_T0015373.1 MGP_WSBEiJ_G0013503.1 mouse_genomes_project 7 101386525 101386887 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086044.1 MGP_WSBEiJ_G0032315.1 mouse_genomes_project 7 145114897 145115812 - MGP_WSBEiJ_P0086044 Olfr531 protein_coding protein_coding MGP_WSBEiJ_T0082527.1 MGP_WSBEiJ_G0031384.1 mouse_genomes_project 7 45971151 45972735 - MGP_WSBEiJ_P0082527 Fgf21 protein_coding protein_coding MGP_WSBEiJ_T0086146.1 MGP_WSBEiJ_G0032353.1 mouse_genomes_project 7 146030112 146036922 + Lrrc56 protein_coding retained_intron MGP_WSBEiJ_T0086147.1 MGP_WSBEiJ_G0032353.1 mouse_genomes_project 7 146031041 146046104 + MGP_WSBEiJ_P0086147 Lrrc56 protein_coding protein_coding MGP_WSBEiJ_T0086148.1 MGP_WSBEiJ_G0032353.1 mouse_genomes_project 7 146031076 146034216 + Lrrc56 protein_coding processed_transcript MGP_WSBEiJ_T0086149.1 MGP_WSBEiJ_G0032353.1 mouse_genomes_project 7 146032866 146035819 + Lrrc56 protein_coding processed_transcript MGP_WSBEiJ_T0083594.1 MGP_WSBEiJ_G0031646.1 mouse_genomes_project 7 92212745 92213832 + MGP_WSBEiJ_P0083594 protein_coding protein_coding MGP_WSBEiJ_T0002169.1 MGP_WSBEiJ_G0002088.1 mouse_genomes_project 7 36854619 36855823 - TEC TEC MGP_WSBEiJ_T0099740.1 MGP_WSBEiJ_G0038403.1 mouse_genomes_project 7 112777625 112777757 + Snora3 snoRNA snoRNA MGP_WSBEiJ_T0099751.1 MGP_WSBEiJ_G0038414.1 mouse_genomes_project 7 124840015 124840152 - Gm27991 snoRNA snoRNA MGP_WSBEiJ_T0008703.1 MGP_WSBEiJ_G0007041.1 mouse_genomes_project 7 37582867 37603119 + Gm44635 lincRNA lincRNA MGP_WSBEiJ_T0084183.1 MGP_WSBEiJ_G0031837.1 mouse_genomes_project 7 106915749 106916694 - MGP_WSBEiJ_P0084183 Olfr642 protein_coding protein_coding MGP_WSBEiJ_T0080277.1 MGP_WSBEiJ_G0030800.1 mouse_genomes_project 7 9728116 9734461 + Zfp606 protein_coding retained_intron MGP_WSBEiJ_T0080278.1 MGP_WSBEiJ_G0030800.1 mouse_genomes_project 7 9728154 9744884 + MGP_WSBEiJ_P0080278 Zfp606 protein_coding protein_coding MGP_WSBEiJ_T0080279.1 MGP_WSBEiJ_G0030800.1 mouse_genomes_project 7 9728174 9746108 + MGP_WSBEiJ_P0080279 Zfp606 protein_coding protein_coding MGP_WSBEiJ_T0080280.1 MGP_WSBEiJ_G0030800.1 mouse_genomes_project 7 9740064 9746099 + Zfp606 protein_coding retained_intron MGP_WSBEiJ_T0083550.1 MGP_WSBEiJ_G0031633.1 mouse_genomes_project 7 89425621 89490020 + MGP_WSBEiJ_P0083550 Nox4 protein_coding protein_coding MGP_WSBEiJ_T0083551.1 MGP_WSBEiJ_G0031633.1 mouse_genomes_project 7 89427022 89493366 + Nox4 protein_coding retained_intron MGP_WSBEiJ_T0083552.1 MGP_WSBEiJ_G0031633.1 mouse_genomes_project 7 89427022 89471872 + Nox4 protein_coding processed_transcript MGP_WSBEiJ_T0083553.1 MGP_WSBEiJ_G0031633.1 mouse_genomes_project 7 89427022 89576613 + MGP_WSBEiJ_P0083553 Nox4 protein_coding protein_coding MGP_WSBEiJ_T0083554.1 MGP_WSBEiJ_G0031633.1 mouse_genomes_project 7 89427022 89580304 + MGP_WSBEiJ_P0083554 Nox4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083555.1 MGP_WSBEiJ_G0031633.1 mouse_genomes_project 7 89427022 89573101 + MGP_WSBEiJ_P0083555 Nox4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083556.1 MGP_WSBEiJ_G0031633.1 mouse_genomes_project 7 89427022 89580304 + MGP_WSBEiJ_P0083556 Nox4 protein_coding protein_coding MGP_WSBEiJ_T0083557.1 MGP_WSBEiJ_G0031633.1 mouse_genomes_project 7 89427185 89579933 + MGP_WSBEiJ_P0083557 Nox4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096847.1 MGP_WSBEiJ_G0035528.1 mouse_genomes_project 7 111506092 111507036 - pseudogene pseudogene MGP_WSBEiJ_T0008896.1 MGP_WSBEiJ_G0007166.1 mouse_genomes_project 7 134071626 134093182 + Gm44778 lincRNA lincRNA MGP_WSBEiJ_T0084412.1 MGP_WSBEiJ_G0031945.1 mouse_genomes_project 7 111120128 111121061 + MGP_WSBEiJ_P0084412 Olfr474 protein_coding protein_coding MGP_WSBEiJ_T0085600.1 MGP_WSBEiJ_G0032210.1 mouse_genomes_project 7 132206866 132277757 + MGP_WSBEiJ_P0085600 Itgam protein_coding protein_coding MGP_WSBEiJ_T0085604.1 MGP_WSBEiJ_G0032210.1 mouse_genomes_project 7 132267033 132276813 + MGP_WSBEiJ_P0085604 Itgam protein_coding protein_coding MGP_WSBEiJ_T0010658.1 MGP_WSBEiJ_G0008815.1 mouse_genomes_project 7 4487671 4487727 + Mir5620 miRNA miRNA MGP_WSBEiJ_T0086414.1 MGP_WSBEiJ_G0032396.1 mouse_genomes_project 7 147651749 147652779 - MGP_WSBEiJ_P0086414 Ins2 protein_coding protein_coding MGP_WSBEiJ_T0086415.1 MGP_WSBEiJ_G0032396.1 mouse_genomes_project 7 147651749 147672630 - MGP_WSBEiJ_P0086415 Ins2 protein_coding protein_coding MGP_WSBEiJ_T0086416.1 MGP_WSBEiJ_G0032396.1 mouse_genomes_project 7 147651752 147652820 - MGP_WSBEiJ_P0086416 Ins2 protein_coding protein_coding MGP_WSBEiJ_T0086417.1 MGP_WSBEiJ_G0032396.1 mouse_genomes_project 7 147651752 147652792 - MGP_WSBEiJ_P0086417 Ins2 protein_coding protein_coding MGP_WSBEiJ_T0086418.1 MGP_WSBEiJ_G0032396.1 mouse_genomes_project 7 147651752 147652786 - MGP_WSBEiJ_P0086418 Ins2 protein_coding protein_coding MGP_WSBEiJ_T0086419.1 MGP_WSBEiJ_G0032396.1 mouse_genomes_project 7 147651754 147652811 - MGP_WSBEiJ_P0086419 Ins2 protein_coding protein_coding MGP_WSBEiJ_T0086420.1 MGP_WSBEiJ_G0032396.1 mouse_genomes_project 7 147651802 147652674 - MGP_WSBEiJ_P0086420 Ins2 protein_coding protein_coding MGP_WSBEiJ_T0086421.1 MGP_WSBEiJ_G0032396.1 mouse_genomes_project 7 147651806 147652627 - MGP_WSBEiJ_P0086421 Ins2 protein_coding protein_coding MGP_WSBEiJ_T0101062.1 MGP_WSBEiJ_G0039519.1 mouse_genomes_project 7 49051629 49052614 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085289.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130936283 130941861 - MGP_WSBEiJ_P0085289 Tmem219 protein_coding protein_coding MGP_WSBEiJ_T0085290.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130936330 130947501 - MGP_WSBEiJ_P0085290 Tmem219 protein_coding protein_coding MGP_WSBEiJ_T0085291.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130936332 130939407 - Tmem219 protein_coding retained_intron MGP_WSBEiJ_T0085292.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130936332 130975404 - MGP_WSBEiJ_P0085292 Tmem219 protein_coding protein_coding MGP_WSBEiJ_T0085293.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130936332 130948330 - MGP_WSBEiJ_P0085293 Tmem219 protein_coding protein_coding MGP_WSBEiJ_T0085294.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130936332 130948353 - MGP_WSBEiJ_P0085294 Tmem219 protein_coding protein_coding MGP_WSBEiJ_T0085295.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130936334 130946953 - MGP_WSBEiJ_P0085295 Tmem219 protein_coding protein_coding MGP_WSBEiJ_T0085296.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130939126 130975406 - MGP_WSBEiJ_P0085296 Tmem219 protein_coding protein_coding MGP_WSBEiJ_T0085297.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130941085 130948358 - Tmem219 protein_coding retained_intron MGP_WSBEiJ_T0085298.1 MGP_WSBEiJ_G0032146.1 mouse_genomes_project 7 130941707 130975389 - MGP_WSBEiJ_P0085298 Tmem219 protein_coding protein_coding MGP_WSBEiJ_T0082404.1 MGP_WSBEiJ_G0031359.1 mouse_genomes_project 7 45497658 45498502 + MGP_WSBEiJ_P0082404 Pth2 protein_coding protein_coding MGP_WSBEiJ_T0097098.1 MGP_WSBEiJ_G0035779.1 mouse_genomes_project 7 84493279 84493387 - n-R5s154 rRNA rRNA MGP_WSBEiJ_T0083845.1 MGP_WSBEiJ_G0031707.1 mouse_genomes_project 7 102788647 102790736 + MGP_WSBEiJ_P0083845 Lipt2 protein_coding protein_coding MGP_WSBEiJ_T0098525.1 MGP_WSBEiJ_G0037188.1 mouse_genomes_project 7 146965530 146965637 - Gm25416 snRNA snRNA MGP_WSBEiJ_T0084232.1 MGP_WSBEiJ_G0031859.1 mouse_genomes_project 7 107371603 107372664 + MGP_WSBEiJ_P0084232 Olfr652 protein_coding protein_coding MGP_WSBEiJ_T0084233.1 MGP_WSBEiJ_G0031859.1 mouse_genomes_project 7 107371683 107372631 + MGP_WSBEiJ_P0084233 Olfr652 protein_coding protein_coding MGP_WSBEiJ_T0002277.1 MGP_WSBEiJ_G0002195.1 mouse_genomes_project 7 148297301 148301221 + TEC TEC MGP_WSBEiJ_T0084902.1 MGP_WSBEiJ_G0032082.1 mouse_genomes_project 7 125464577 125531301 - MGP_WSBEiJ_P0084902 Usp31 protein_coding protein_coding MGP_WSBEiJ_T0084903.1 MGP_WSBEiJ_G0032082.1 mouse_genomes_project 7 125481334 125489980 - Usp31 protein_coding retained_intron MGP_WSBEiJ_T0082467.1 MGP_WSBEiJ_G0031373.1 mouse_genomes_project 7 45758959 45775586 - MGP_WSBEiJ_P0082467 Ruvbl2 protein_coding protein_coding MGP_WSBEiJ_T0082468.1 MGP_WSBEiJ_G0031373.1 mouse_genomes_project 7 45759005 45771725 - MGP_WSBEiJ_P0082468 Ruvbl2 protein_coding protein_coding MGP_WSBEiJ_T0082469.1 MGP_WSBEiJ_G0031373.1 mouse_genomes_project 7 45762058 45771811 - MGP_WSBEiJ_P0082469 Ruvbl2 protein_coding protein_coding MGP_WSBEiJ_T0086299.1 MGP_WSBEiJ_G0032377.1 mouse_genomes_project 7 146575414 146583797 + MGP_WSBEiJ_P0086299 Muc2 protein_coding protein_coding MGP_WSBEiJ_T0086300.1 MGP_WSBEiJ_G0032377.1 mouse_genomes_project 7 146575443 146608092 + MGP_WSBEiJ_P0086300 Muc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086301.1 MGP_WSBEiJ_G0032377.1 mouse_genomes_project 7 146580776 146582260 + MGP_WSBEiJ_P0086301 Muc2 protein_coding protein_coding MGP_WSBEiJ_T0086302.1 MGP_WSBEiJ_G0032377.1 mouse_genomes_project 7 146584584 146586883 + MGP_WSBEiJ_P0086302 Muc2 protein_coding protein_coding MGP_WSBEiJ_T0086303.1 MGP_WSBEiJ_G0032377.1 mouse_genomes_project 7 146587602 146588281 + MGP_WSBEiJ_P0086303 Muc2 protein_coding protein_coding MGP_WSBEiJ_T0086304.1 MGP_WSBEiJ_G0032377.1 mouse_genomes_project 7 146589672 146590119 + MGP_WSBEiJ_P0086304 Muc2 protein_coding protein_coding MGP_WSBEiJ_T0086305.1 MGP_WSBEiJ_G0032377.1 mouse_genomes_project 7 146596338 146608086 + MGP_WSBEiJ_P0086305 Muc2 protein_coding protein_coding MGP_WSBEiJ_T0086306.1 MGP_WSBEiJ_G0032377.1 mouse_genomes_project 7 146598558 146608083 + MGP_WSBEiJ_P0086306 Muc2 protein_coding protein_coding MGP_WSBEiJ_T0085410.1 MGP_WSBEiJ_G0032174.1 mouse_genomes_project 7 131507414 131519233 - MGP_WSBEiJ_P0085410 protein_coding protein_coding MGP_WSBEiJ_T0083821.1 MGP_WSBEiJ_G0031698.1 mouse_genomes_project 7 102240621 102299816 - MGP_WSBEiJ_P0083821 Slco2b1 protein_coding protein_coding MGP_WSBEiJ_T0083822.1 MGP_WSBEiJ_G0031698.1 mouse_genomes_project 7 102241206 102281033 - MGP_WSBEiJ_P0083822 Slco2b1 protein_coding protein_coding MGP_WSBEiJ_T0083823.1 MGP_WSBEiJ_G0031698.1 mouse_genomes_project 7 102241206 102295620 - MGP_WSBEiJ_P0083823 Slco2b1 protein_coding protein_coding MGP_WSBEiJ_T0083824.1 MGP_WSBEiJ_G0031698.1 mouse_genomes_project 7 102242674 102247752 - MGP_WSBEiJ_P0083824 Slco2b1 protein_coding protein_coding MGP_WSBEiJ_T0083825.1 MGP_WSBEiJ_G0031698.1 mouse_genomes_project 7 102274304 102280852 - MGP_WSBEiJ_P0083825 Slco2b1 protein_coding protein_coding MGP_WSBEiJ_T0083826.1 MGP_WSBEiJ_G0031698.1 mouse_genomes_project 7 102275907 102280806 - MGP_WSBEiJ_P0083826 Slco2b1 protein_coding protein_coding MGP_WSBEiJ_T0081010.1 MGP_WSBEiJ_G0031016.1 mouse_genomes_project 7 23762453 23805897 - MGP_WSBEiJ_P0081010 protein_coding protein_coding MGP_WSBEiJ_T0084557.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114416524 114428120 - MGP_WSBEiJ_P0084557 Eif4g2 protein_coding protein_coding MGP_WSBEiJ_T0084558.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114418172 114418955 - Eif4g2 protein_coding processed_transcript MGP_WSBEiJ_T0084559.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114418395 114420065 - Eif4g2 protein_coding retained_intron MGP_WSBEiJ_T0084560.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114419203 114420053 - MGP_WSBEiJ_P0084560 Eif4g2 protein_coding protein_coding MGP_WSBEiJ_T0084561.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114419941 114420503 - Eif4g2 protein_coding retained_intron MGP_WSBEiJ_T0084562.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114420676 114421189 - Eif4g2 protein_coding retained_intron MGP_WSBEiJ_T0084563.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114421015 114422012 - Eif4g2 protein_coding processed_transcript MGP_WSBEiJ_T0084564.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114422325 114423554 - Eif4g2 protein_coding retained_intron MGP_WSBEiJ_T0084565.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114423752 114425167 - Eif4g2 protein_coding retained_intron MGP_WSBEiJ_T0084566.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114424224 114428820 - MGP_WSBEiJ_P0084566 Eif4g2 protein_coding protein_coding MGP_WSBEiJ_T0084567.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114425140 114427996 - MGP_WSBEiJ_P0084567 Eif4g2 protein_coding protein_coding MGP_WSBEiJ_T0084568.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114426219 114428628 - Eif4g2 protein_coding retained_intron MGP_WSBEiJ_T0084569.1 MGP_WSBEiJ_G0032003.1 mouse_genomes_project 7 114426717 114427654 - MGP_WSBEiJ_P0084569 Eif4g2 protein_coding protein_coding MGP_WSBEiJ_T0097465.1 MGP_WSBEiJ_G0036134.1 mouse_genomes_project 7 133903732 133929577 + Gm33248 sense_intronic sense_intronic MGP_WSBEiJ_T0083177.1 MGP_WSBEiJ_G0031536.1 mouse_genomes_project 7 80752047 80843371 + MGP_WSBEiJ_P0083177 Abhd2 protein_coding protein_coding MGP_WSBEiJ_T0005168.1 MGP_WSBEiJ_G0004391.1 mouse_genomes_project 7 91717894 91719256 + Prss23os antisense antisense MGP_WSBEiJ_T0005169.1 MGP_WSBEiJ_G0004391.1 mouse_genomes_project 7 91717910 91718379 + Prss23os antisense antisense MGP_WSBEiJ_T0100317.1 MGP_WSBEiJ_G0038813.1 mouse_genomes_project 7 14289194 14298514 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100318.1 MGP_WSBEiJ_G0038813.1 mouse_genomes_project 7 14289577 14292028 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0015355.1 MGP_WSBEiJ_G0013485.1 mouse_genomes_project 7 90647721 90648277 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083284.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81863900 81891701 + MGP_WSBEiJ_P0083284 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083285.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81863901 81891701 + MGP_WSBEiJ_P0083285 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083286.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81863915 81888183 + Prc1 protein_coding retained_intron MGP_WSBEiJ_T0083287.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81863923 81891021 + MGP_WSBEiJ_P0083287 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083288.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81863924 81873838 + Prc1 protein_coding retained_intron MGP_WSBEiJ_T0083289.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81863929 81891693 + MGP_WSBEiJ_P0083289 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083290.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81863955 81891696 + MGP_WSBEiJ_P0083290 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083291.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81863963 81874028 + Prc1 protein_coding retained_intron MGP_WSBEiJ_T0083292.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81873801 81875364 + Prc1 protein_coding retained_intron MGP_WSBEiJ_T0083293.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81874135 81886309 + MGP_WSBEiJ_P0083293 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083294.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81878814 81891699 + MGP_WSBEiJ_P0083294 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083295.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81886273 81888931 + MGP_WSBEiJ_P0083295 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083296.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81886529 81890954 + MGP_WSBEiJ_P0083296 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0083297.1 MGP_WSBEiJ_G0031560.1 mouse_genomes_project 7 81887744 81889134 + MGP_WSBEiJ_P0083297 Prc1 protein_coding protein_coding MGP_WSBEiJ_T0098486.1 MGP_WSBEiJ_G0037149.1 mouse_genomes_project 7 67045732 67045833 - Gm23042 snRNA snRNA MGP_WSBEiJ_T0099733.1 MGP_WSBEiJ_G0038396.1 mouse_genomes_project 7 99993158 99993856 + Gm24412 snoRNA snoRNA MGP_WSBEiJ_T0082632.1 MGP_WSBEiJ_G0031415.1 mouse_genomes_project 7 46790611 46793215 + MGP_WSBEiJ_P0082632 Myod1 protein_coding protein_coding MGP_WSBEiJ_T0081981.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 34984414 35038939 + MGP_WSBEiJ_P0081981 Ankrd27 protein_coding protein_coding MGP_WSBEiJ_T0081982.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 34984420 34999848 + MGP_WSBEiJ_P0081982 Ankrd27 protein_coding protein_coding MGP_WSBEiJ_T0081983.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 34984420 35007344 + MGP_WSBEiJ_P0081983 Ankrd27 protein_coding protein_coding MGP_WSBEiJ_T0081984.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 34984425 35034445 + MGP_WSBEiJ_P0081984 Ankrd27 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081985.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 34984445 35002092 + MGP_WSBEiJ_P0081985 Ankrd27 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081986.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 34984447 35038939 + MGP_WSBEiJ_P0081986 Ankrd27 protein_coding protein_coding MGP_WSBEiJ_T0081987.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 34999630 35002562 + Ankrd27 protein_coding retained_intron MGP_WSBEiJ_T0081988.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 35009961 35012856 + Ankrd27 protein_coding retained_intron MGP_WSBEiJ_T0081989.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 35013759 35026289 + MGP_WSBEiJ_P0081989 Ankrd27 protein_coding protein_coding MGP_WSBEiJ_T0081990.1 MGP_WSBEiJ_G0031242.1 mouse_genomes_project 7 35017290 35025384 + MGP_WSBEiJ_P0081990 Ankrd27 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010725.1 MGP_WSBEiJ_G0008882.1 mouse_genomes_project 7 98706018 98706127 + Mir708 miRNA miRNA MGP_WSBEiJ_T0086297.1 MGP_WSBEiJ_G0032376.1 mouse_genomes_project 7 146504300 146535476 - MGP_WSBEiJ_P0086297 Muc6 protein_coding protein_coding MGP_WSBEiJ_T0086298.1 MGP_WSBEiJ_G0032376.1 mouse_genomes_project 7 146504812 146535476 - MGP_WSBEiJ_P0086298 Muc6 protein_coding protein_coding MGP_WSBEiJ_T0015251.1 MGP_WSBEiJ_G0013381.1 mouse_genomes_project 7 23708961 23711680 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008699.1 MGP_WSBEiJ_G0007037.1 mouse_genomes_project 7 36629022 36630178 + Gm28075 lincRNA lincRNA MGP_WSBEiJ_T0008760.1 MGP_WSBEiJ_G0007080.1 mouse_genomes_project 7 73122592 73139459 - Gm36633 lincRNA lincRNA MGP_WSBEiJ_T0101110.1 MGP_WSBEiJ_G0039567.1 mouse_genomes_project 7 106839866 106841251 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084234.1 MGP_WSBEiJ_G0031860.1 mouse_genomes_project 7 107386692 107387738 + MGP_WSBEiJ_P0084234 Olfr653 protein_coding protein_coding MGP_WSBEiJ_T0100325.1 MGP_WSBEiJ_G0038817.1 mouse_genomes_project 7 39063920 39099056 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0086181.1 MGP_WSBEiJ_G0032358.1 mouse_genomes_project 7 146108166 146115862 - MGP_WSBEiJ_P0086181 Cdhr5 protein_coding protein_coding MGP_WSBEiJ_T0086182.1 MGP_WSBEiJ_G0032358.1 mouse_genomes_project 7 146108166 146115862 - MGP_WSBEiJ_P0086182 Cdhr5 protein_coding protein_coding MGP_WSBEiJ_T0080559.1 MGP_WSBEiJ_G0030889.1 mouse_genomes_project 7 16441930 16687306 - MGP_WSBEiJ_P0080559 protein_coding protein_coding MGP_WSBEiJ_T0099709.1 MGP_WSBEiJ_G0038372.1 mouse_genomes_project 7 45431893 45431980 - Snord35b snoRNA snoRNA MGP_WSBEiJ_T0017780.1 MGP_WSBEiJ_G0015096.1 mouse_genomes_project 7 71483163 71534223 + processed_transcript antisense MGP_WSBEiJ_T0017781.1 MGP_WSBEiJ_G0015096.1 mouse_genomes_project 7 71508268 71534227 + processed_transcript retained_intron MGP_WSBEiJ_T0017782.1 MGP_WSBEiJ_G0015096.1 mouse_genomes_project 7 71508268 71525652 + processed_transcript antisense MGP_WSBEiJ_T0017783.1 MGP_WSBEiJ_G0015096.1 mouse_genomes_project 7 71510978 71511516 + processed_transcript processed_transcript MGP_WSBEiJ_T0015357.1 MGP_WSBEiJ_G0013487.1 mouse_genomes_project 7 92353414 92353914 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015203.1 MGP_WSBEiJ_G0013333.1 mouse_genomes_project 7 901126 901525 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015399.1 MGP_WSBEiJ_G0013529.1 mouse_genomes_project 7 126344865 126345105 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081618.1 MGP_WSBEiJ_G0031171.1 mouse_genomes_project 7 29353454 29366191 - MGP_WSBEiJ_P0081618 Arhgap33 protein_coding unknown_likely_coding MGP_WSBEiJ_T0008686.1 MGP_WSBEiJ_G0007025.1 mouse_genomes_project 7 33836713 33848925 + Gm12784 lincRNA lincRNA MGP_WSBEiJ_T0008687.1 MGP_WSBEiJ_G0007025.1 mouse_genomes_project 7 33839451 33875809 + Gm12784 lincRNA lincRNA MGP_WSBEiJ_T0083307.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81901342 81919985 - MGP_WSBEiJ_P0083307 Unc45a protein_coding protein_coding MGP_WSBEiJ_T0083308.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81901345 81919199 - MGP_WSBEiJ_P0083308 Unc45a protein_coding protein_coding MGP_WSBEiJ_T0083309.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81901346 81919151 - MGP_WSBEiJ_P0083309 Unc45a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083310.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81901376 81918742 - MGP_WSBEiJ_P0083310 Unc45a protein_coding protein_coding MGP_WSBEiJ_T0083311.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81911259 81919186 - MGP_WSBEiJ_P0083311 Unc45a protein_coding protein_coding MGP_WSBEiJ_T0083312.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81917450 81919181 - Unc45a protein_coding retained_intron MGP_WSBEiJ_T0083313.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81918000 81919128 - Unc45a protein_coding retained_intron MGP_WSBEiJ_T0083314.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81918288 81919197 - MGP_WSBEiJ_P0083314 Unc45a protein_coding protein_coding MGP_WSBEiJ_T0083315.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81918292 81919199 - Unc45a protein_coding processed_transcript MGP_WSBEiJ_T0083316.1 MGP_WSBEiJ_G0031561.1 mouse_genomes_project 7 81918683 81919191 - Unc45a protein_coding retained_intron MGP_WSBEiJ_T0005084.1 MGP_WSBEiJ_G0004328.1 mouse_genomes_project 7 17908500 17918034 + Gm16251 antisense antisense MGP_WSBEiJ_T0084065.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104977145 104990341 + Pgap2 protein_coding processed_transcript MGP_WSBEiJ_T0084066.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104977272 104996539 + MGP_WSBEiJ_P0084066 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084067.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104977296 105010346 + MGP_WSBEiJ_P0084067 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084068.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104977306 104996599 + MGP_WSBEiJ_P0084068 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084069.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104977458 104987893 + Pgap2 protein_coding processed_transcript MGP_WSBEiJ_T0084070.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104977469 105008246 + Pgap2 protein_coding retained_intron MGP_WSBEiJ_T0084071.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989297 105007952 + MGP_WSBEiJ_P0084071 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084072.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989501 105009013 + MGP_WSBEiJ_P0084072 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084073.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989885 105010346 + MGP_WSBEiJ_P0084073 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084074.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989902 105009011 + MGP_WSBEiJ_P0084074 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084075.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989907 105009561 + MGP_WSBEiJ_P0084075 Pgap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084076.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989910 105008018 + MGP_WSBEiJ_P0084076 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084077.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989926 105009547 + MGP_WSBEiJ_P0084077 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084078.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989928 104997265 + Pgap2 protein_coding retained_intron MGP_WSBEiJ_T0084079.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989929 105009447 + Pgap2 protein_coding processed_transcript MGP_WSBEiJ_T0084080.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989932 104996508 + MGP_WSBEiJ_P0084080 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084081.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989935 105008203 + Pgap2 protein_coding retained_intron MGP_WSBEiJ_T0084082.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989941 105009405 + MGP_WSBEiJ_P0084082 Pgap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084083.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989942 105009518 + MGP_WSBEiJ_P0084083 Pgap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084084.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104989950 105010339 + Pgap2 protein_coding processed_transcript MGP_WSBEiJ_T0084085.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104990139 105008083 + MGP_WSBEiJ_P0084085 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084086.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104995971 105008120 + MGP_WSBEiJ_P0084086 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084087.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 104995984 105009337 + MGP_WSBEiJ_P0084087 Pgap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084088.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 105001793 105010339 + MGP_WSBEiJ_P0084088 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084089.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 105007638 105009315 + MGP_WSBEiJ_P0084089 Pgap2 protein_coding protein_coding MGP_WSBEiJ_T0084090.1 MGP_WSBEiJ_G0031749.1 mouse_genomes_project 7 105007687 105009439 + Pgap2 protein_coding retained_intron MGP_WSBEiJ_T0008914.1 MGP_WSBEiJ_G0007177.1 mouse_genomes_project 7 149971153 149974056 - Gm26793 lincRNA lincRNA MGP_WSBEiJ_T0099721.1 MGP_WSBEiJ_G0038384.1 mouse_genomes_project 7 60499028 60499107 - snoRNA snoRNA MGP_WSBEiJ_T0008655.1 MGP_WSBEiJ_G0006997.1 mouse_genomes_project 7 361504 388546 + Gm44160 lincRNA lincRNA MGP_WSBEiJ_T0086047.1 MGP_WSBEiJ_G0032318.1 mouse_genomes_project 7 145219262 145220253 + MGP_WSBEiJ_P0086047 Olfr535 protein_coding protein_coding MGP_WSBEiJ_T0008893.1 MGP_WSBEiJ_G0007164.1 mouse_genomes_project 7 133626947 133634973 - Gm44591 lincRNA lincRNA MGP_WSBEiJ_T0015287.1 MGP_WSBEiJ_G0013417.1 mouse_genomes_project 7 42139096 42140062 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085305.1 MGP_WSBEiJ_G0032149.1 mouse_genomes_project 7 131004547 131024525 + MGP_WSBEiJ_P0085305 Sez6l2 protein_coding protein_coding MGP_WSBEiJ_T0085306.1 MGP_WSBEiJ_G0032149.1 mouse_genomes_project 7 131004568 131012190 + MGP_WSBEiJ_P0085306 Sez6l2 protein_coding protein_coding MGP_WSBEiJ_T0085307.1 MGP_WSBEiJ_G0032149.1 mouse_genomes_project 7 131004713 131024515 + MGP_WSBEiJ_P0085307 Sez6l2 protein_coding protein_coding MGP_WSBEiJ_T0085308.1 MGP_WSBEiJ_G0032149.1 mouse_genomes_project 7 131004950 131024189 + MGP_WSBEiJ_P0085308 Sez6l2 protein_coding protein_coding MGP_WSBEiJ_T0085309.1 MGP_WSBEiJ_G0032149.1 mouse_genomes_project 7 131007825 131013356 + MGP_WSBEiJ_P0085309 Sez6l2 protein_coding protein_coding MGP_WSBEiJ_T0085310.1 MGP_WSBEiJ_G0032149.1 mouse_genomes_project 7 131021660 131024189 + Sez6l2 protein_coding retained_intron MGP_WSBEiJ_T0085311.1 MGP_WSBEiJ_G0032149.1 mouse_genomes_project 7 131021886 131024523 + MGP_WSBEiJ_P0085311 Sez6l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084382.1 MGP_WSBEiJ_G0031922.1 mouse_genomes_project 7 109963414 109964365 - MGP_WSBEiJ_P0084382 protein_coding protein_coding MGP_WSBEiJ_T0081619.1 MGP_WSBEiJ_G0031172.1 mouse_genomes_project 7 29370335 29384552 - MGP_WSBEiJ_P0081619 Proser3 protein_coding protein_coding MGP_WSBEiJ_T0081620.1 MGP_WSBEiJ_G0031172.1 mouse_genomes_project 7 29370729 29381988 - MGP_WSBEiJ_P0081620 Proser3 protein_coding protein_coding MGP_WSBEiJ_T0081621.1 MGP_WSBEiJ_G0031172.1 mouse_genomes_project 7 29373581 29384619 - Proser3 protein_coding retained_intron MGP_WSBEiJ_T0081622.1 MGP_WSBEiJ_G0031172.1 mouse_genomes_project 7 29381361 29384615 - MGP_WSBEiJ_P0081622 Proser3 protein_coding protein_coding MGP_WSBEiJ_T0083027.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68478797 68619273 - MGP_WSBEiJ_P0083027 Lrrc28 protein_coding protein_coding MGP_WSBEiJ_T0083028.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68478798 68612666 - MGP_WSBEiJ_P0083028 Lrrc28 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083029.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68480265 68547819 - Lrrc28 protein_coding processed_transcript MGP_WSBEiJ_T0083030.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68497216 68612702 - MGP_WSBEiJ_P0083030 Lrrc28 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083031.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68497341 68503385 - Lrrc28 protein_coding processed_transcript MGP_WSBEiJ_T0083032.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68499390 68591581 - Lrrc28 protein_coding processed_transcript MGP_WSBEiJ_T0083033.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68499481 68578330 - Lrrc28 protein_coding processed_transcript MGP_WSBEiJ_T0083034.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68499491 68591530 - Lrrc28 protein_coding processed_transcript MGP_WSBEiJ_T0083035.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68512743 68619246 - MGP_WSBEiJ_P0083035 Lrrc28 protein_coding protein_coding MGP_WSBEiJ_T0083036.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68564015 68619249 - MGP_WSBEiJ_P0083036 Lrrc28 protein_coding protein_coding MGP_WSBEiJ_T0083037.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68565017 68591552 - Lrrc28 protein_coding processed_transcript MGP_WSBEiJ_T0083038.1 MGP_WSBEiJ_G0031509.1 mouse_genomes_project 7 68589615 68619310 - MGP_WSBEiJ_P0083038 Lrrc28 protein_coding protein_coding MGP_WSBEiJ_T0085338.1 MGP_WSBEiJ_G0032156.1 mouse_genomes_project 7 131077657 131081953 - MGP_WSBEiJ_P0085338 Maz protein_coding unknown_likely_coding MGP_WSBEiJ_T0085339.1 MGP_WSBEiJ_G0032156.1 mouse_genomes_project 7 131077666 131081986 - MGP_WSBEiJ_P0085339 Maz protein_coding protein_coding MGP_WSBEiJ_T0085340.1 MGP_WSBEiJ_G0032156.1 mouse_genomes_project 7 131077667 131081848 - MGP_WSBEiJ_P0085340 Maz protein_coding protein_coding MGP_WSBEiJ_T0085341.1 MGP_WSBEiJ_G0032156.1 mouse_genomes_project 7 131078422 131082106 - MGP_WSBEiJ_P0085341 Maz protein_coding protein_coding MGP_WSBEiJ_T0085342.1 MGP_WSBEiJ_G0032156.1 mouse_genomes_project 7 131078582 131080666 - Maz protein_coding retained_intron MGP_WSBEiJ_T0002149.1 MGP_WSBEiJ_G0002068.1 mouse_genomes_project 7 234118 234453 + TEC TEC MGP_WSBEiJ_T0010731.1 MGP_WSBEiJ_G0008888.1 mouse_genomes_project 7 112780565 112780685 + miRNA miRNA MGP_WSBEiJ_T0084893.1 MGP_WSBEiJ_G0032079.1 mouse_genomes_project 7 124863738 124874202 - MGP_WSBEiJ_P0084893 Igsf6 protein_coding protein_coding MGP_WSBEiJ_T0084425.1 MGP_WSBEiJ_G0031958.1 mouse_genomes_project 7 111551234 111552179 + MGP_WSBEiJ_P0084425 Olfr497 protein_coding protein_coding MGP_WSBEiJ_T0017832.1 MGP_WSBEiJ_G0015120.1 mouse_genomes_project 7 146205072 146211047 - B230206H07Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017833.1 MGP_WSBEiJ_G0015120.1 mouse_genomes_project 7 146205109 146211075 - B230206H07Rik processed_transcript processed_transcript MGP_WSBEiJ_T0085766.1 MGP_WSBEiJ_G0032238.1 mouse_genomes_project 7 135640317 135645119 - MGP_WSBEiJ_P0085766 1700007K09Rik protein_coding protein_coding MGP_WSBEiJ_T0085767.1 MGP_WSBEiJ_G0032238.1 mouse_genomes_project 7 135640472 135642919 - MGP_WSBEiJ_P0085767 1700007K09Rik protein_coding protein_coding MGP_WSBEiJ_T0080900.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23112319 23117750 + MGP_WSBEiJ_P0080900 Rps19 protein_coding protein_coding MGP_WSBEiJ_T0080901.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23112581 23117750 + MGP_WSBEiJ_P0080901 Rps19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080902.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23112583 23115708 + Rps19 protein_coding retained_intron MGP_WSBEiJ_T0080903.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23112584 23117746 + MGP_WSBEiJ_P0080903 Rps19 protein_coding protein_coding MGP_WSBEiJ_T0080904.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23112599 23116899 + MGP_WSBEiJ_P0080904 Rps19 protein_coding protein_coding MGP_WSBEiJ_T0080905.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23112662 23117750 + MGP_WSBEiJ_P0080905 Rps19 protein_coding protein_coding MGP_WSBEiJ_T0080906.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23112761 23116879 + MGP_WSBEiJ_P0080906 Rps19 protein_coding protein_coding MGP_WSBEiJ_T0080907.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23112865 23116921 + MGP_WSBEiJ_P0080907 Rps19 protein_coding protein_coding MGP_WSBEiJ_T0080908.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23116138 23117748 + Rps19 protein_coding retained_intron MGP_WSBEiJ_T0080909.1 MGP_WSBEiJ_G0030995.1 mouse_genomes_project 7 23116688 23117748 + Rps19 protein_coding processed_transcript MGP_WSBEiJ_T0015232.1 MGP_WSBEiJ_G0013362.1 mouse_genomes_project 7 11706662 11709569 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002244.1 MGP_WSBEiJ_G0002162.1 mouse_genomes_project 7 103104348 103105275 + TEC TEC MGP_WSBEiJ_T0082465.1 MGP_WSBEiJ_G0031371.1 mouse_genomes_project 7 45747438 45750901 + MGP_WSBEiJ_P0082465 Ntf5 protein_coding protein_coding MGP_WSBEiJ_T0002206.1 MGP_WSBEiJ_G0002125.1 mouse_genomes_project 7 74623575 74625659 + TEC TEC MGP_WSBEiJ_T0002162.1 MGP_WSBEiJ_G0002081.1 mouse_genomes_project 7 34393181 34393798 - TEC TEC MGP_WSBEiJ_T0010724.1 MGP_WSBEiJ_G0008881.1 mouse_genomes_project 7 88391050 88391146 - Gm23192 miRNA miRNA MGP_WSBEiJ_T0101016.1 MGP_WSBEiJ_G0039473.1 mouse_genomes_project 7 30333105 30334371 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080783.1 MGP_WSBEiJ_G0030954.1 mouse_genomes_project 7 21578279 21579774 - MGP_WSBEiJ_P0080783 protein_coding protein_coding MGP_WSBEiJ_T0081991.1 MGP_WSBEiJ_G0031243.1 mouse_genomes_project 7 35041694 35048329 - MGP_WSBEiJ_P0081991 Pdcd5 protein_coding protein_coding MGP_WSBEiJ_T0081992.1 MGP_WSBEiJ_G0031243.1 mouse_genomes_project 7 35041724 35047537 - MGP_WSBEiJ_P0081992 Pdcd5 protein_coding protein_coding MGP_WSBEiJ_T0081993.1 MGP_WSBEiJ_G0031243.1 mouse_genomes_project 7 35041726 35042925 - Pdcd5 protein_coding retained_intron MGP_WSBEiJ_T0081994.1 MGP_WSBEiJ_G0031243.1 mouse_genomes_project 7 35041728 35043736 - Pdcd5 protein_coding retained_intron MGP_WSBEiJ_T0081995.1 MGP_WSBEiJ_G0031243.1 mouse_genomes_project 7 35043702 35048312 - Pdcd5 protein_coding retained_intron MGP_WSBEiJ_T0081996.1 MGP_WSBEiJ_G0031243.1 mouse_genomes_project 7 35044067 35048288 - Pdcd5 protein_coding retained_intron MGP_WSBEiJ_T0081997.1 MGP_WSBEiJ_G0031243.1 mouse_genomes_project 7 35046001 35048274 - Pdcd5 protein_coding retained_intron MGP_WSBEiJ_T0101009.1 MGP_WSBEiJ_G0039466.1 mouse_genomes_project 7 24343861 24351656 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099712.1 MGP_WSBEiJ_G0038375.1 mouse_genomes_project 7 45437451 45437535 - Snord33 snoRNA snoRNA MGP_WSBEiJ_T0080672.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17321567 17335252 + MGP_WSBEiJ_P0080672 Ercc2 protein_coding protein_coding MGP_WSBEiJ_T0080673.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17321575 17325250 + Ercc2 protein_coding processed_transcript MGP_WSBEiJ_T0080674.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17321588 17335250 + MGP_WSBEiJ_P0080674 Ercc2 protein_coding protein_coding MGP_WSBEiJ_T0080675.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17321597 17335252 + MGP_WSBEiJ_P0080675 Ercc2 protein_coding protein_coding MGP_WSBEiJ_T0080676.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17321765 17325455 + Ercc2 protein_coding processed_transcript MGP_WSBEiJ_T0080677.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17321826 17334019 + MGP_WSBEiJ_P0080677 Ercc2 protein_coding protein_coding MGP_WSBEiJ_T0080678.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17327796 17333238 + Ercc2 protein_coding processed_transcript MGP_WSBEiJ_T0080679.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17329970 17331452 + Ercc2 protein_coding retained_intron MGP_WSBEiJ_T0080680.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17332987 17334344 + Ercc2 protein_coding retained_intron MGP_WSBEiJ_T0080681.1 MGP_WSBEiJ_G0030920.1 mouse_genomes_project 7 17333218 17333623 + Ercc2 protein_coding retained_intron MGP_WSBEiJ_T0082167.1 MGP_WSBEiJ_G0031292.1 mouse_genomes_project 7 43981089 43986953 + MGP_WSBEiJ_P0082167 Klk9 protein_coding protein_coding MGP_WSBEiJ_T0084160.1 MGP_WSBEiJ_G0031814.1 mouse_genomes_project 7 106507437 106508391 - MGP_WSBEiJ_P0084160 Olfr623 protein_coding protein_coding MGP_WSBEiJ_T0084129.1 MGP_WSBEiJ_G0031784.1 mouse_genomes_project 7 105842777 105843737 + MGP_WSBEiJ_P0084129 Olfr583 protein_coding protein_coding MGP_WSBEiJ_T0002249.1 MGP_WSBEiJ_G0002167.1 mouse_genomes_project 7 125666196 125667810 - TEC TEC MGP_WSBEiJ_T0005196.1 MGP_WSBEiJ_G0004409.1 mouse_genomes_project 7 119894062 119894944 + Gm44777 antisense antisense MGP_WSBEiJ_T0005197.1 MGP_WSBEiJ_G0004409.1 mouse_genomes_project 7 119894069 119898155 + Gm44777 antisense antisense MGP_WSBEiJ_T0005198.1 MGP_WSBEiJ_G0004409.1 mouse_genomes_project 7 119895811 119898475 + Gm44777 antisense antisense MGP_WSBEiJ_T0081476.1 MGP_WSBEiJ_G0031134.1 mouse_genomes_project 7 28569019 28581100 + MGP_WSBEiJ_P0081476 Zfp30 protein_coding protein_coding MGP_WSBEiJ_T0081477.1 MGP_WSBEiJ_G0031134.1 mouse_genomes_project 7 28569044 28578313 + Zfp30 protein_coding retained_intron MGP_WSBEiJ_T0081478.1 MGP_WSBEiJ_G0031134.1 mouse_genomes_project 7 28571270 28584567 + MGP_WSBEiJ_P0081478 Zfp30 protein_coding protein_coding MGP_WSBEiJ_T0008664.1 MGP_WSBEiJ_G0007004.1 mouse_genomes_project 7 16857435 16861284 - Gm26821 lincRNA lincRNA MGP_WSBEiJ_T0084434.1 MGP_WSBEiJ_G0031967.1 mouse_genomes_project 7 111918431 111919487 + MGP_WSBEiJ_P0084434 Olfr512 protein_coding protein_coding MGP_WSBEiJ_T0015368.1 MGP_WSBEiJ_G0013498.1 mouse_genomes_project 7 100130862 100131340 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082650.1 MGP_WSBEiJ_G0031419.1 mouse_genomes_project 7 47120102 47143079 - MGP_WSBEiJ_P0082650 Saal1 protein_coding protein_coding MGP_WSBEiJ_T0082651.1 MGP_WSBEiJ_G0031419.1 mouse_genomes_project 7 47123304 47141333 - Saal1 protein_coding retained_intron MGP_WSBEiJ_T0082652.1 MGP_WSBEiJ_G0031419.1 mouse_genomes_project 7 47123339 47143040 - Saal1 protein_coding retained_intron MGP_WSBEiJ_T0082653.1 MGP_WSBEiJ_G0031419.1 mouse_genomes_project 7 47123341 47123932 - Saal1 protein_coding processed_transcript MGP_WSBEiJ_T0082654.1 MGP_WSBEiJ_G0031419.1 mouse_genomes_project 7 47125239 47143057 - Saal1 protein_coding retained_intron MGP_WSBEiJ_T0082655.1 MGP_WSBEiJ_G0031419.1 mouse_genomes_project 7 47125648 47143060 - Saal1 protein_coding retained_intron MGP_WSBEiJ_T0005125.1 MGP_WSBEiJ_G0004360.1 mouse_genomes_project 7 37169998 37172553 + 4930505M18Rik antisense antisense MGP_WSBEiJ_T0086476.1 MGP_WSBEiJ_G0032408.1 mouse_genomes_project 7 148520522 148557016 - MGP_WSBEiJ_P0086476 Nap1l4 protein_coding protein_coding MGP_WSBEiJ_T0086245.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291298 146298417 - Pidd1 protein_coding retained_intron MGP_WSBEiJ_T0086246.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291298 146298450 - MGP_WSBEiJ_P0086246 Pidd1 protein_coding protein_coding MGP_WSBEiJ_T0086247.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291298 146297781 - MGP_WSBEiJ_P0086247 Pidd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086248.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291298 146297778 - MGP_WSBEiJ_P0086248 Pidd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086249.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291302 146298433 - Pidd1 protein_coding retained_intron MGP_WSBEiJ_T0086250.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291310 146297781 - Pidd1 protein_coding retained_intron MGP_WSBEiJ_T0086251.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291700 146297780 - MGP_WSBEiJ_P0086251 Pidd1 protein_coding protein_coding MGP_WSBEiJ_T0086252.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291710 146297745 - MGP_WSBEiJ_P0086252 Pidd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086253.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146291715 146297745 - Pidd1 protein_coding retained_intron MGP_WSBEiJ_T0086254.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146292684 146294549 - Pidd1 protein_coding retained_intron MGP_WSBEiJ_T0086255.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146295474 146296714 - Pidd1 protein_coding retained_intron MGP_WSBEiJ_T0086256.1 MGP_WSBEiJ_G0032368.1 mouse_genomes_project 7 146296590 146298419 - Pidd1 protein_coding processed_transcript MGP_WSBEiJ_T0002260.1 MGP_WSBEiJ_G0002178.1 mouse_genomes_project 7 129293365 129294525 + TEC TEC MGP_WSBEiJ_T0005228.1 MGP_WSBEiJ_G0004432.1 mouse_genomes_project 7 137363761 137367718 - Gm15718 antisense antisense MGP_WSBEiJ_T0086055.1 MGP_WSBEiJ_G0032326.1 mouse_genomes_project 7 145472971 145475867 + MGP_WSBEiJ_P0086055 Olfr541 protein_coding protein_coding MGP_WSBEiJ_T0085990.1 MGP_WSBEiJ_G0032295.1 mouse_genomes_project 7 144671905 144685559 - Adam8 protein_coding retained_intron MGP_WSBEiJ_T0085991.1 MGP_WSBEiJ_G0032295.1 mouse_genomes_project 7 144671905 144681410 - Adam8 protein_coding retained_intron MGP_WSBEiJ_T0085992.1 MGP_WSBEiJ_G0032295.1 mouse_genomes_project 7 144671905 144685559 - MGP_WSBEiJ_P0085992 Adam8 protein_coding protein_coding MGP_WSBEiJ_T0085993.1 MGP_WSBEiJ_G0032295.1 mouse_genomes_project 7 144671905 144685545 - MGP_WSBEiJ_P0085993 Adam8 protein_coding protein_coding MGP_WSBEiJ_T0085994.1 MGP_WSBEiJ_G0032295.1 mouse_genomes_project 7 144672367 144673336 - Adam8 protein_coding processed_transcript MGP_WSBEiJ_T0085995.1 MGP_WSBEiJ_G0032295.1 mouse_genomes_project 7 144676829 144685559 - MGP_WSBEiJ_P0085995 Adam8 protein_coding protein_coding MGP_WSBEiJ_T0085996.1 MGP_WSBEiJ_G0032295.1 mouse_genomes_project 7 144680629 144681406 - Adam8 protein_coding processed_transcript MGP_WSBEiJ_T0085997.1 MGP_WSBEiJ_G0032295.1 mouse_genomes_project 7 144682394 144685505 - MGP_WSBEiJ_P0085997 Adam8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008846.1 MGP_WSBEiJ_G0007136.1 mouse_genomes_project 7 118441828 118480049 + A730082K24Rik lincRNA lincRNA MGP_WSBEiJ_T0008847.1 MGP_WSBEiJ_G0007136.1 mouse_genomes_project 7 118441866 118452302 + A730082K24Rik lincRNA lincRNA MGP_WSBEiJ_T0008848.1 MGP_WSBEiJ_G0007136.1 mouse_genomes_project 7 118445471 118470349 + A730082K24Rik lincRNA lincRNA MGP_WSBEiJ_T0008849.1 MGP_WSBEiJ_G0007136.1 mouse_genomes_project 7 118445486 118470315 + A730082K24Rik lincRNA lincRNA MGP_WSBEiJ_T0008850.1 MGP_WSBEiJ_G0007136.1 mouse_genomes_project 7 118445504 118478954 + A730082K24Rik lincRNA lincRNA MGP_WSBEiJ_T0008841.1 MGP_WSBEiJ_G0007132.1 mouse_genomes_project 7 117168338 117193306 + Gm29507 lincRNA lincRNA MGP_WSBEiJ_T0010652.1 MGP_WSBEiJ_G0008809.1 mouse_genomes_project 7 99308 99388 + Mir293 miRNA miRNA MGP_WSBEiJ_T0084837.1 MGP_WSBEiJ_G0032061.1 mouse_genomes_project 7 123648092 123825037 - MGP_WSBEiJ_P0084837 Dnah3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0084838.1 MGP_WSBEiJ_G0032061.1 mouse_genomes_project 7 123649484 123825037 - MGP_WSBEiJ_P0084838 Dnah3 protein_coding protein_coding MGP_WSBEiJ_T0005087.1 MGP_WSBEiJ_G0004331.1 mouse_genomes_project 7 22788542 22795206 - Gm26550 antisense antisense MGP_WSBEiJ_T0101073.1 MGP_WSBEiJ_G0039530.1 mouse_genomes_project 7 87036852 87037773 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085670.1 MGP_WSBEiJ_G0032222.1 mouse_genomes_project 7 132709162 132733325 + MGP_WSBEiJ_P0085670 Bag3 protein_coding protein_coding MGP_WSBEiJ_T0010713.1 MGP_WSBEiJ_G0008870.1 mouse_genomes_project 7 62899672 62899760 - Mir344i miRNA miRNA MGP_WSBEiJ_T0084239.1 MGP_WSBEiJ_G0031865.1 mouse_genomes_project 7 107501310 107502279 + MGP_WSBEiJ_P0084239 Olfr659 protein_coding protein_coding MGP_WSBEiJ_T0098523.1 MGP_WSBEiJ_G0037186.1 mouse_genomes_project 7 145936888 145936997 - Gm24962 snRNA snRNA MGP_WSBEiJ_T0082223.1 MGP_WSBEiJ_G0031314.1 mouse_genomes_project 7 44700250 44702618 + MGP_WSBEiJ_P0082223 Aspdh protein_coding protein_coding MGP_WSBEiJ_T0082224.1 MGP_WSBEiJ_G0031314.1 mouse_genomes_project 7 44700268 44702194 + MGP_WSBEiJ_P0082224 Aspdh protein_coding protein_coding MGP_WSBEiJ_T0082225.1 MGP_WSBEiJ_G0031314.1 mouse_genomes_project 7 44700276 44702081 + MGP_WSBEiJ_P0082225 Aspdh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082226.1 MGP_WSBEiJ_G0031314.1 mouse_genomes_project 7 44700285 44702072 + Aspdh protein_coding retained_intron MGP_WSBEiJ_T0082227.1 MGP_WSBEiJ_G0031314.1 mouse_genomes_project 7 44700303 44702176 + Aspdh protein_coding processed_transcript MGP_WSBEiJ_T0082228.1 MGP_WSBEiJ_G0031314.1 mouse_genomes_project 7 44701328 44702555 + MGP_WSBEiJ_P0082228 Aspdh protein_coding protein_coding MGP_WSBEiJ_T0085941.1 MGP_WSBEiJ_G0032284.1 mouse_genomes_project 7 143712032 143728694 + MGP_WSBEiJ_P0085941 Dpysl4 protein_coding protein_coding MGP_WSBEiJ_T0085942.1 MGP_WSBEiJ_G0032284.1 mouse_genomes_project 7 143712033 143720519 + Dpysl4 protein_coding processed_transcript MGP_WSBEiJ_T0085943.1 MGP_WSBEiJ_G0032284.1 mouse_genomes_project 7 143712058 143727786 + Dpysl4 protein_coding retained_intron MGP_WSBEiJ_T0085944.1 MGP_WSBEiJ_G0032284.1 mouse_genomes_project 7 143712059 143727774 + Dpysl4 protein_coding retained_intron MGP_WSBEiJ_T0085945.1 MGP_WSBEiJ_G0032284.1 mouse_genomes_project 7 143714396 143720485 + MGP_WSBEiJ_P0085945 Dpysl4 protein_coding protein_coding MGP_WSBEiJ_T0085946.1 MGP_WSBEiJ_G0032284.1 mouse_genomes_project 7 143715278 143727768 + MGP_WSBEiJ_P0085946 Dpysl4 protein_coding protein_coding MGP_WSBEiJ_T0084182.1 MGP_WSBEiJ_G0031836.1 mouse_genomes_project 7 106904826 106905765 + MGP_WSBEiJ_P0084182 Olfr641 protein_coding protein_coding MGP_WSBEiJ_T0086128.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145953560 145988434 + MGP_WSBEiJ_P0086128 Ptdss2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086129.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145961590 145986915 + MGP_WSBEiJ_P0086129 Ptdss2 protein_coding protein_coding MGP_WSBEiJ_T0086130.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145961612 145986747 + MGP_WSBEiJ_P0086130 Ptdss2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086131.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145962620 145990999 + MGP_WSBEiJ_P0086131 Ptdss2 protein_coding protein_coding MGP_WSBEiJ_T0086132.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145962635 145988301 + Ptdss2 protein_coding retained_intron MGP_WSBEiJ_T0086133.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145962678 145977261 + Ptdss2 protein_coding processed_transcript MGP_WSBEiJ_T0086134.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145962690 145976761 + MGP_WSBEiJ_P0086134 Ptdss2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086135.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145963772 145980936 + MGP_WSBEiJ_P0086135 Ptdss2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086136.1 MGP_WSBEiJ_G0032350.1 mouse_genomes_project 7 145963887 145977290 + Ptdss2 protein_coding processed_transcript MGP_WSBEiJ_T0084145.1 MGP_WSBEiJ_G0031799.1 mouse_genomes_project 7 106256364 106257279 - MGP_WSBEiJ_P0084145 protein_coding protein_coding MGP_WSBEiJ_T0081097.1 MGP_WSBEiJ_G0031039.1 mouse_genomes_project 7 25258846 25297397 + MGP_WSBEiJ_P0081097 Cyp2g1 protein_coding protein_coding MGP_WSBEiJ_T0081098.1 MGP_WSBEiJ_G0031039.1 mouse_genomes_project 7 25258881 25274458 + MGP_WSBEiJ_P0081098 Cyp2g1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081099.1 MGP_WSBEiJ_G0031039.1 mouse_genomes_project 7 25273057 25275962 + Cyp2g1 protein_coding retained_intron MGP_WSBEiJ_T0082703.1 MGP_WSBEiJ_G0031435.1 mouse_genomes_project 7 47718850 47738192 - MGP_WSBEiJ_P0082703 Mrgpra9 protein_coding protein_coding MGP_WSBEiJ_T0082704.1 MGP_WSBEiJ_G0031435.1 mouse_genomes_project 7 47718856 47738212 - MGP_WSBEiJ_P0082704 Mrgpra9 protein_coding protein_coding MGP_WSBEiJ_T0083801.1 MGP_WSBEiJ_G0031694.1 mouse_genomes_project 7 102025008 102033056 + MGP_WSBEiJ_P0083801 Klhl35 protein_coding protein_coding MGP_WSBEiJ_T0083802.1 MGP_WSBEiJ_G0031694.1 mouse_genomes_project 7 102027931 102030752 + MGP_WSBEiJ_P0083802 Klhl35 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083803.1 MGP_WSBEiJ_G0031694.1 mouse_genomes_project 7 102028918 102030839 + Klhl35 protein_coding retained_intron MGP_WSBEiJ_T0083804.1 MGP_WSBEiJ_G0031694.1 mouse_genomes_project 7 102030791 102032638 + MGP_WSBEiJ_P0083804 Klhl35 protein_coding protein_coding MGP_WSBEiJ_T0084147.1 MGP_WSBEiJ_G0031801.1 mouse_genomes_project 7 106284401 106285361 - MGP_WSBEiJ_P0084147 Olfr609 protein_coding protein_coding MGP_WSBEiJ_T0085906.1 MGP_WSBEiJ_G0032273.1 mouse_genomes_project 7 140002658 140170703 + MGP_WSBEiJ_P0085906 Ptpre protein_coding protein_coding MGP_WSBEiJ_T0005239.1 MGP_WSBEiJ_G0004440.1 mouse_genomes_project 7 148612413 148613579 + Gm15579 antisense antisense MGP_WSBEiJ_T0010649.1 MGP_WSBEiJ_G0008806.1 mouse_genomes_project 7 98237 98319 + Mir292 miRNA miRNA MGP_WSBEiJ_T0082812.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56818173 56843046 - MGP_WSBEiJ_P0082812 Nipa2 protein_coding protein_coding MGP_WSBEiJ_T0082813.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56818173 56843009 - MGP_WSBEiJ_P0082813 Nipa2 protein_coding protein_coding MGP_WSBEiJ_T0082814.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56818173 56842815 - MGP_WSBEiJ_P0082814 Nipa2 protein_coding protein_coding MGP_WSBEiJ_T0082815.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56818173 56843020 - MGP_WSBEiJ_P0082815 Nipa2 protein_coding protein_coding MGP_WSBEiJ_T0082816.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56820135 56842962 - Nipa2 protein_coding processed_transcript MGP_WSBEiJ_T0082817.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56820400 56824951 - Nipa2 protein_coding retained_intron MGP_WSBEiJ_T0082818.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56822688 56843046 - MGP_WSBEiJ_P0082818 Nipa2 protein_coding protein_coding MGP_WSBEiJ_T0082819.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56822736 56843000 - MGP_WSBEiJ_P0082819 Nipa2 protein_coding protein_coding MGP_WSBEiJ_T0082820.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56828833 56843038 - Nipa2 protein_coding retained_intron MGP_WSBEiJ_T0082821.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56829010 56832611 - Nipa2 protein_coding retained_intron MGP_WSBEiJ_T0082822.1 MGP_WSBEiJ_G0031465.1 mouse_genomes_project 7 56832273 56842743 - MGP_WSBEiJ_P0082822 Nipa2 protein_coding protein_coding MGP_WSBEiJ_T0082544.1 MGP_WSBEiJ_G0031393.1 mouse_genomes_project 7 46068665 46073733 + MGP_WSBEiJ_P0082544 Dbp protein_coding protein_coding MGP_WSBEiJ_T0082545.1 MGP_WSBEiJ_G0031393.1 mouse_genomes_project 7 46069201 46073692 + MGP_WSBEiJ_P0082545 Dbp protein_coding protein_coding MGP_WSBEiJ_T0082546.1 MGP_WSBEiJ_G0031393.1 mouse_genomes_project 7 46069201 46073692 + MGP_WSBEiJ_P0082546 Dbp protein_coding protein_coding MGP_WSBEiJ_T0082547.1 MGP_WSBEiJ_G0031393.1 mouse_genomes_project 7 46070681 46073606 + Dbp protein_coding retained_intron MGP_WSBEiJ_T0082548.1 MGP_WSBEiJ_G0031393.1 mouse_genomes_project 7 46071466 46073474 + Dbp protein_coding retained_intron MGP_WSBEiJ_T0082783.1 MGP_WSBEiJ_G0031462.1 mouse_genomes_project 7 56650993 56655345 + MGP_WSBEiJ_P0082783 Siglech protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082784.1 MGP_WSBEiJ_G0031462.1 mouse_genomes_project 7 56650999 56656298 + MGP_WSBEiJ_P0082784 Siglech protein_coding protein_coding MGP_WSBEiJ_T0082785.1 MGP_WSBEiJ_G0031462.1 mouse_genomes_project 7 56650999 56656298 + MGP_WSBEiJ_P0082785 Siglech protein_coding protein_coding MGP_WSBEiJ_T0082786.1 MGP_WSBEiJ_G0031462.1 mouse_genomes_project 7 56651041 56662530 + MGP_WSBEiJ_P0082786 Siglech protein_coding protein_coding MGP_WSBEiJ_T0082787.1 MGP_WSBEiJ_G0031462.1 mouse_genomes_project 7 56651041 56662315 + MGP_WSBEiJ_P0082787 Siglech protein_coding protein_coding MGP_WSBEiJ_T0082788.1 MGP_WSBEiJ_G0031462.1 mouse_genomes_project 7 56651051 56661246 + MGP_WSBEiJ_P0082788 Siglech protein_coding protein_coding MGP_WSBEiJ_T0082789.1 MGP_WSBEiJ_G0031462.1 mouse_genomes_project 7 56651051 56661299 + MGP_WSBEiJ_P0082789 Siglech protein_coding protein_coding MGP_WSBEiJ_T0082790.1 MGP_WSBEiJ_G0031462.1 mouse_genomes_project 7 56651076 56662622 + MGP_WSBEiJ_P0082790 Siglech protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011493.1 MGP_WSBEiJ_G0009650.1 mouse_genomes_project 7 118429438 118429756 + Gm22669 misc_RNA misc_RNA MGP_WSBEiJ_T0015383.1 MGP_WSBEiJ_G0013513.1 mouse_genomes_project 7 106835288 106837824 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084632.1 MGP_WSBEiJ_G0032021.1 mouse_genomes_project 7 117877817 118006940 + MGP_WSBEiJ_P0084632 Pde3b protein_coding protein_coding MGP_WSBEiJ_T0084633.1 MGP_WSBEiJ_G0032021.1 mouse_genomes_project 7 117973875 117976164 + Pde3b protein_coding retained_intron MGP_WSBEiJ_T0084634.1 MGP_WSBEiJ_G0032021.1 mouse_genomes_project 7 117989456 117998706 + Pde3b protein_coding retained_intron MGP_WSBEiJ_T0083379.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82515397 82526067 - MGP_WSBEiJ_P0083379 Wdr73 protein_coding protein_coding MGP_WSBEiJ_T0083380.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82515398 82526030 - Wdr73 protein_coding retained_intron MGP_WSBEiJ_T0083381.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82515398 82526030 - Wdr73 protein_coding retained_intron MGP_WSBEiJ_T0083382.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82515925 82526032 - Wdr73 protein_coding retained_intron MGP_WSBEiJ_T0083383.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82517660 82526017 - Wdr73 protein_coding processed_transcript MGP_WSBEiJ_T0083384.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82517724 82526018 - MGP_WSBEiJ_P0083384 Wdr73 protein_coding protein_coding MGP_WSBEiJ_T0083385.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82517725 82525517 - Wdr73 protein_coding processed_transcript MGP_WSBEiJ_T0083386.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82518364 82525302 - Wdr73 protein_coding processed_transcript MGP_WSBEiJ_T0083387.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82522568 82526042 - Wdr73 protein_coding processed_transcript MGP_WSBEiJ_T0083388.1 MGP_WSBEiJ_G0031570.1 mouse_genomes_project 7 82525470 82526030 - Wdr73 protein_coding processed_transcript MGP_WSBEiJ_T0081696.1 MGP_WSBEiJ_G0031185.1 mouse_genomes_project 7 29510245 29511129 - MGP_WSBEiJ_P0081696 Pmis2 protein_coding protein_coding MGP_WSBEiJ_T0081697.1 MGP_WSBEiJ_G0031185.1 mouse_genomes_project 7 29510280 29511124 - Pmis2 protein_coding processed_transcript MGP_WSBEiJ_T0101001.1 MGP_WSBEiJ_G0039458.1 mouse_genomes_project 7 13379316 13385143 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083543.1 MGP_WSBEiJ_G0031628.1 mouse_genomes_project 7 88844509 88845444 + MGP_WSBEiJ_P0083543 protein_coding protein_coding MGP_WSBEiJ_T0084020.1 MGP_WSBEiJ_G0031737.1 mouse_genomes_project 7 104653836 104680784 + MGP_WSBEiJ_P0084020 Lamtor1 protein_coding protein_coding MGP_WSBEiJ_T0084021.1 MGP_WSBEiJ_G0031737.1 mouse_genomes_project 7 104653857 104659224 + MGP_WSBEiJ_P0084021 Lamtor1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0008735.1 MGP_WSBEiJ_G0007062.1 mouse_genomes_project 7 64914257 64921659 - Gm45054 lincRNA lincRNA MGP_WSBEiJ_T0080558.1 MGP_WSBEiJ_G0030888.1 mouse_genomes_project 7 16401407 16405842 - MGP_WSBEiJ_P0080558 protein_coding protein_coding MGP_WSBEiJ_T0085174.1 MGP_WSBEiJ_G0032131.1 mouse_genomes_project 7 130727036 130733949 - MGP_WSBEiJ_P0085174 Slx1b protein_coding protein_coding MGP_WSBEiJ_T0085175.1 MGP_WSBEiJ_G0032131.1 mouse_genomes_project 7 130728035 130733804 - Slx1b protein_coding retained_intron MGP_WSBEiJ_T0085176.1 MGP_WSBEiJ_G0032131.1 mouse_genomes_project 7 130728475 130733910 - Slx1b protein_coding retained_intron MGP_WSBEiJ_T0085177.1 MGP_WSBEiJ_G0032131.1 mouse_genomes_project 7 130728475 130733889 - MGP_WSBEiJ_P0085177 Slx1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079929.1 MGP_WSBEiJ_G0030691.1 mouse_genomes_project 7 518851 523196 + Cnot3 protein_coding retained_intron MGP_WSBEiJ_T0079930.1 MGP_WSBEiJ_G0030691.1 mouse_genomes_project 7 518873 536154 + Cnot3 protein_coding retained_intron MGP_WSBEiJ_T0079931.1 MGP_WSBEiJ_G0030691.1 mouse_genomes_project 7 518892 525451 + MGP_WSBEiJ_P0079931 Cnot3 protein_coding protein_coding MGP_WSBEiJ_T0079932.1 MGP_WSBEiJ_G0030691.1 mouse_genomes_project 7 518935 536155 + MGP_WSBEiJ_P0079932 Cnot3 protein_coding protein_coding MGP_WSBEiJ_T0079933.1 MGP_WSBEiJ_G0030691.1 mouse_genomes_project 7 524908 529427 + MGP_WSBEiJ_P0079933 Cnot3 protein_coding protein_coding MGP_WSBEiJ_T0079934.1 MGP_WSBEiJ_G0030691.1 mouse_genomes_project 7 525170 533300 + MGP_WSBEiJ_P0079934 Cnot3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079935.1 MGP_WSBEiJ_G0030691.1 mouse_genomes_project 7 532747 535661 + Cnot3 protein_coding retained_intron MGP_WSBEiJ_T0079936.1 MGP_WSBEiJ_G0030691.1 mouse_genomes_project 7 533948 535661 + MGP_WSBEiJ_P0079936 Cnot3 protein_coding protein_coding MGP_WSBEiJ_T0086524.1 MGP_WSBEiJ_G0032420.1 mouse_genomes_project 7 149494718 149532383 - MGP_WSBEiJ_P0086524 Cttn protein_coding unknown_likely_coding MGP_WSBEiJ_T0086525.1 MGP_WSBEiJ_G0032420.1 mouse_genomes_project 7 149495720 149511224 - Cttn protein_coding retained_intron MGP_WSBEiJ_T0086526.1 MGP_WSBEiJ_G0032420.1 mouse_genomes_project 7 149496953 149507355 - Cttn protein_coding processed_transcript MGP_WSBEiJ_T0086527.1 MGP_WSBEiJ_G0032420.1 mouse_genomes_project 7 149499356 149532284 - MGP_WSBEiJ_P0086527 Cttn protein_coding unknown_likely_coding MGP_WSBEiJ_T0086528.1 MGP_WSBEiJ_G0032420.1 mouse_genomes_project 7 149507252 149514032 - Cttn protein_coding processed_transcript MGP_WSBEiJ_T0086529.1 MGP_WSBEiJ_G0032420.1 mouse_genomes_project 7 149517908 149522218 - Cttn protein_coding processed_transcript MGP_WSBEiJ_T0015236.1 MGP_WSBEiJ_G0013366.1 mouse_genomes_project 7 14341874 14342427 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084624.1 MGP_WSBEiJ_G0032017.1 mouse_genomes_project 7 117208551 117498666 + MGP_WSBEiJ_P0084624 Spon1 protein_coding protein_coding MGP_WSBEiJ_T0084625.1 MGP_WSBEiJ_G0032017.1 mouse_genomes_project 7 117208727 117383733 + MGP_WSBEiJ_P0084625 Spon1 protein_coding protein_coding MGP_WSBEiJ_T0084787.1 MGP_WSBEiJ_G0032048.1 mouse_genomes_project 7 123147942 123166740 - MGP_WSBEiJ_P0084787 Gp2 protein_coding protein_coding MGP_WSBEiJ_T0082709.1 MGP_WSBEiJ_G0031439.1 mouse_genomes_project 7 48923232 48924269 - MGP_WSBEiJ_P0082709 Mrgprb5 protein_coding protein_coding MGP_WSBEiJ_T0081276.1 MGP_WSBEiJ_G0031089.1 mouse_genomes_project 7 26964832 26966877 + MGP_WSBEiJ_P0081276 Rps16 protein_coding protein_coding MGP_WSBEiJ_T0081277.1 MGP_WSBEiJ_G0031089.1 mouse_genomes_project 7 26964943 26966877 + Rps16 protein_coding retained_intron MGP_WSBEiJ_T0081278.1 MGP_WSBEiJ_G0031089.1 mouse_genomes_project 7 26965104 26966877 + Rps16 protein_coding processed_transcript MGP_WSBEiJ_T0084107.1 MGP_WSBEiJ_G0031764.1 mouse_genomes_project 7 105435627 105436575 + MGP_WSBEiJ_P0084107 Olfr555 protein_coding protein_coding MGP_WSBEiJ_T0010758.1 MGP_WSBEiJ_G0008915.1 mouse_genomes_project 7 148961089 148961183 + Mir6404 miRNA miRNA MGP_WSBEiJ_T0008692.1 MGP_WSBEiJ_G0007030.1 mouse_genomes_project 7 34479023 34485427 - Gm45229 lincRNA lincRNA MGP_WSBEiJ_T0086150.1 MGP_WSBEiJ_G0032354.1 mouse_genomes_project 7 146046088 146050181 - MGP_WSBEiJ_P0086150 Lmntd2 protein_coding protein_coding MGP_WSBEiJ_T0086151.1 MGP_WSBEiJ_G0032354.1 mouse_genomes_project 7 146046088 146050183 - MGP_WSBEiJ_P0086151 Lmntd2 protein_coding protein_coding MGP_WSBEiJ_T0015345.1 MGP_WSBEiJ_G0013475.1 mouse_genomes_project 7 82532594 82532918 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081334.1 MGP_WSBEiJ_G0031105.1 mouse_genomes_project 7 27428928 27444046 + MGP_WSBEiJ_P0081334 Sars2 protein_coding protein_coding MGP_WSBEiJ_T0083790.1 MGP_WSBEiJ_G0031688.1 mouse_genomes_project 7 101420107 101686205 - MGP_WSBEiJ_P0083790 Uvrag protein_coding protein_coding MGP_WSBEiJ_T0082214.1 MGP_WSBEiJ_G0031312.1 mouse_genomes_project 7 44615304 44632189 + MGP_WSBEiJ_P0082214 Syt3 protein_coding protein_coding MGP_WSBEiJ_T0082215.1 MGP_WSBEiJ_G0031312.1 mouse_genomes_project 7 44615329 44616653 + Syt3 protein_coding processed_transcript MGP_WSBEiJ_T0082216.1 MGP_WSBEiJ_G0031312.1 mouse_genomes_project 7 44615356 44632347 + MGP_WSBEiJ_P0082216 Syt3 protein_coding protein_coding MGP_WSBEiJ_T0082217.1 MGP_WSBEiJ_G0031312.1 mouse_genomes_project 7 44615806 44617255 + MGP_WSBEiJ_P0082217 Syt3 protein_coding protein_coding MGP_WSBEiJ_T0082218.1 MGP_WSBEiJ_G0031312.1 mouse_genomes_project 7 44615806 44617325 + MGP_WSBEiJ_P0082218 Syt3 protein_coding protein_coding MGP_WSBEiJ_T0082219.1 MGP_WSBEiJ_G0031312.1 mouse_genomes_project 7 44616070 44631923 + MGP_WSBEiJ_P0082219 Syt3 protein_coding protein_coding MGP_WSBEiJ_T0015291.1 MGP_WSBEiJ_G0013421.1 mouse_genomes_project 7 42459977 42460232 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080578.1 MGP_WSBEiJ_G0030896.1 mouse_genomes_project 7 16888107 16889670 + MGP_WSBEiJ_P0080578 Nanos2 protein_coding protein_coding MGP_WSBEiJ_T0084780.1 MGP_WSBEiJ_G0032045.1 mouse_genomes_project 7 122547802 122594423 + Iqck protein_coding retained_intron MGP_WSBEiJ_T0084781.1 MGP_WSBEiJ_G0032045.1 mouse_genomes_project 7 122547817 122668661 + MGP_WSBEiJ_P0084781 Iqck protein_coding protein_coding MGP_WSBEiJ_T0084782.1 MGP_WSBEiJ_G0032045.1 mouse_genomes_project 7 122547817 122669193 + MGP_WSBEiJ_P0084782 Iqck protein_coding protein_coding MGP_WSBEiJ_T0084783.1 MGP_WSBEiJ_G0032045.1 mouse_genomes_project 7 122547817 122668829 + MGP_WSBEiJ_P0084783 Iqck protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084784.1 MGP_WSBEiJ_G0032045.1 mouse_genomes_project 7 122632177 122668307 + Iqck protein_coding processed_transcript MGP_WSBEiJ_T0099701.1 MGP_WSBEiJ_G0038364.1 mouse_genomes_project 7 13506291 13506400 - Snord23 snoRNA snoRNA MGP_WSBEiJ_T0080263.1 MGP_WSBEiJ_G0030789.1 mouse_genomes_project 7 9006342 9007254 + MGP_WSBEiJ_P0080263 Vmn1r73 protein_coding protein_coding MGP_WSBEiJ_T0010703.1 MGP_WSBEiJ_G0008860.1 mouse_genomes_project 7 62521257 62521323 - Mir344e miRNA miRNA MGP_WSBEiJ_T0010677.1 MGP_WSBEiJ_G0008834.1 mouse_genomes_project 7 28700224 28700284 + Mir7668 miRNA miRNA MGP_WSBEiJ_T0015301.1 MGP_WSBEiJ_G0013431.1 mouse_genomes_project 7 44056409 44056714 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084386.1 MGP_WSBEiJ_G0031926.1 mouse_genomes_project 7 110032622 110033573 - MGP_WSBEiJ_P0084386 Olfr6 protein_coding protein_coding MGP_WSBEiJ_T0101063.1 MGP_WSBEiJ_G0039520.1 mouse_genomes_project 7 49101256 49101837 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084392.1 MGP_WSBEiJ_G0031932.1 mouse_genomes_project 7 110190619 110191752 - MGP_WSBEiJ_P0084392 Gm10081 protein_coding protein_coding MGP_WSBEiJ_T0086061.1 MGP_WSBEiJ_G0032330.1 mouse_genomes_project 7 145610787 145613657 + MGP_WSBEiJ_P0086061 Urah protein_coding protein_coding MGP_WSBEiJ_T0086062.1 MGP_WSBEiJ_G0032330.1 mouse_genomes_project 7 145611048 145613736 + MGP_WSBEiJ_P0086062 Urah protein_coding protein_coding MGP_WSBEiJ_T0086063.1 MGP_WSBEiJ_G0032330.1 mouse_genomes_project 7 145611066 145613741 + MGP_WSBEiJ_P0086063 Urah protein_coding protein_coding MGP_WSBEiJ_T0086064.1 MGP_WSBEiJ_G0032330.1 mouse_genomes_project 7 145611103 145612838 + Urah protein_coding retained_intron MGP_WSBEiJ_T0082203.1 MGP_WSBEiJ_G0031310.1 mouse_genomes_project 7 44536248 44587693 + MGP_WSBEiJ_P0082203 Shank1 protein_coding protein_coding MGP_WSBEiJ_T0082204.1 MGP_WSBEiJ_G0031310.1 mouse_genomes_project 7 44538658 44584770 + MGP_WSBEiJ_P0082204 Shank1 protein_coding protein_coding MGP_WSBEiJ_T0082205.1 MGP_WSBEiJ_G0031310.1 mouse_genomes_project 7 44538677 44584620 + MGP_WSBEiJ_P0082205 Shank1 protein_coding protein_coding MGP_WSBEiJ_T0082206.1 MGP_WSBEiJ_G0031310.1 mouse_genomes_project 7 44563318 44571045 + Shank1 protein_coding processed_transcript MGP_WSBEiJ_T0082207.1 MGP_WSBEiJ_G0031310.1 mouse_genomes_project 7 44569441 44578641 + Shank1 protein_coding retained_intron MGP_WSBEiJ_T0082208.1 MGP_WSBEiJ_G0031310.1 mouse_genomes_project 7 44578044 44579340 + Shank1 protein_coding retained_intron MGP_WSBEiJ_T0015363.1 MGP_WSBEiJ_G0013493.1 mouse_genomes_project 7 97909283 97909650 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010734.1 MGP_WSBEiJ_G0008891.1 mouse_genomes_project 7 117102815 117102917 - Gm23700 miRNA miRNA MGP_WSBEiJ_T0080257.1 MGP_WSBEiJ_G0030785.1 mouse_genomes_project 7 7858594 7859491 + MGP_WSBEiJ_P0080257 Vmn1r70 protein_coding protein_coding MGP_WSBEiJ_T0084435.1 MGP_WSBEiJ_G0031968.1 mouse_genomes_project 7 111970476 111971412 + MGP_WSBEiJ_P0084435 Olfr513 protein_coding protein_coding MGP_WSBEiJ_T0002238.1 MGP_WSBEiJ_G0002156.1 mouse_genomes_project 7 81647329 81649170 - TEC TEC MGP_WSBEiJ_T0002187.1 MGP_WSBEiJ_G0002106.1 mouse_genomes_project 7 55827801 55828573 - TEC TEC MGP_WSBEiJ_T0082689.1 MGP_WSBEiJ_G0031428.1 mouse_genomes_project 7 47351167 47386058 - MGP_WSBEiJ_P0082689 Tsg101 protein_coding protein_coding MGP_WSBEiJ_T0082690.1 MGP_WSBEiJ_G0031428.1 mouse_genomes_project 7 47351244 47354203 - Tsg101 protein_coding processed_transcript MGP_WSBEiJ_T0082691.1 MGP_WSBEiJ_G0031428.1 mouse_genomes_project 7 47365402 47380511 - MGP_WSBEiJ_P0082691 Tsg101 protein_coding protein_coding MGP_WSBEiJ_T0082692.1 MGP_WSBEiJ_G0031428.1 mouse_genomes_project 7 47372611 47375066 - Tsg101 protein_coding retained_intron MGP_WSBEiJ_T0082693.1 MGP_WSBEiJ_G0031428.1 mouse_genomes_project 7 47373073 47386026 - MGP_WSBEiJ_P0082693 Tsg101 protein_coding protein_coding MGP_WSBEiJ_T0084724.1 MGP_WSBEiJ_G0032034.1 mouse_genomes_project 7 121753769 121767254 - MGP_WSBEiJ_P0084724 Arl6ip1 protein_coding protein_coding MGP_WSBEiJ_T0084725.1 MGP_WSBEiJ_G0032034.1 mouse_genomes_project 7 121755129 121766702 - Arl6ip1 protein_coding processed_transcript MGP_WSBEiJ_T0084726.1 MGP_WSBEiJ_G0032034.1 mouse_genomes_project 7 121755177 121767168 - MGP_WSBEiJ_P0084726 Arl6ip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084727.1 MGP_WSBEiJ_G0032034.1 mouse_genomes_project 7 121756079 121767166 - MGP_WSBEiJ_P0084727 Arl6ip1 protein_coding protein_coding MGP_WSBEiJ_T0084728.1 MGP_WSBEiJ_G0032034.1 mouse_genomes_project 7 121756106 121767152 - MGP_WSBEiJ_P0084728 Arl6ip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084729.1 MGP_WSBEiJ_G0032034.1 mouse_genomes_project 7 121763870 121767164 - Arl6ip1 protein_coding retained_intron MGP_WSBEiJ_T0086113.1 MGP_WSBEiJ_G0032344.1 mouse_genomes_project 7 145827484 145828565 - MGP_WSBEiJ_P0086113 Ifitm6 protein_coding protein_coding MGP_WSBEiJ_T0083837.1 MGP_WSBEiJ_G0031706.1 mouse_genomes_project 7 102708201 102749642 - MGP_WSBEiJ_P0083837 Pold3 protein_coding protein_coding MGP_WSBEiJ_T0083838.1 MGP_WSBEiJ_G0031706.1 mouse_genomes_project 7 102709483 102749532 - MGP_WSBEiJ_P0083838 Pold3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083839.1 MGP_WSBEiJ_G0031706.1 mouse_genomes_project 7 102709673 102721065 - Pold3 protein_coding retained_intron MGP_WSBEiJ_T0083840.1 MGP_WSBEiJ_G0031706.1 mouse_genomes_project 7 102709752 102717438 - Pold3 protein_coding retained_intron MGP_WSBEiJ_T0083841.1 MGP_WSBEiJ_G0031706.1 mouse_genomes_project 7 102723709 102728007 - Pold3 protein_coding retained_intron MGP_WSBEiJ_T0083842.1 MGP_WSBEiJ_G0031706.1 mouse_genomes_project 7 102726377 102727880 - Pold3 protein_coding retained_intron MGP_WSBEiJ_T0083843.1 MGP_WSBEiJ_G0031706.1 mouse_genomes_project 7 102726908 102749535 - Pold3 protein_coding processed_transcript MGP_WSBEiJ_T0083844.1 MGP_WSBEiJ_G0031706.1 mouse_genomes_project 7 102740341 102747997 - Pold3 protein_coding processed_transcript MGP_WSBEiJ_T0099702.1 MGP_WSBEiJ_G0038365.1 mouse_genomes_project 7 26965688 26965813 + AF357399 snoRNA snoRNA MGP_WSBEiJ_T0098497.1 MGP_WSBEiJ_G0037160.1 mouse_genomes_project 7 97872796 97872903 - Gm25684 snRNA snRNA MGP_WSBEiJ_T0080576.1 MGP_WSBEiJ_G0030894.1 mouse_genomes_project 7 16816794 16861430 + MGP_WSBEiJ_P0080576 protein_coding protein_coding MGP_WSBEiJ_T0005068.1 MGP_WSBEiJ_G0004319.1 mouse_genomes_project 7 4155211 4178269 - Zim3 antisense antisense MGP_WSBEiJ_T0005069.1 MGP_WSBEiJ_G0004319.1 mouse_genomes_project 7 4162852 4177073 - Zim3 antisense antisense MGP_WSBEiJ_T0005070.1 MGP_WSBEiJ_G0004319.1 mouse_genomes_project 7 4177907 4179026 - Zim3 antisense antisense MGP_WSBEiJ_T0005161.1 MGP_WSBEiJ_G0004385.1 mouse_genomes_project 7 81986604 81988913 + Gm44851 antisense antisense MGP_WSBEiJ_T0010678.1 MGP_WSBEiJ_G0008835.1 mouse_genomes_project 7 28904437 28904533 - Gm23368 miRNA miRNA MGP_WSBEiJ_T0082543.1 MGP_WSBEiJ_G0031392.1 mouse_genomes_project 7 46063434 46068237 + MGP_WSBEiJ_P0082543 Car11 protein_coding protein_coding MGP_WSBEiJ_T0082758.1 MGP_WSBEiJ_G0031452.1 mouse_genomes_project 7 50727331 51324138 + MGP_WSBEiJ_P0082758 Nell1 protein_coding protein_coding MGP_WSBEiJ_T0082759.1 MGP_WSBEiJ_G0031452.1 mouse_genomes_project 7 50727331 51655746 + MGP_WSBEiJ_P0082759 Nell1 protein_coding protein_coding MGP_WSBEiJ_T0082760.1 MGP_WSBEiJ_G0031452.1 mouse_genomes_project 7 50727536 51037003 + Nell1 protein_coding retained_intron MGP_WSBEiJ_T0082761.1 MGP_WSBEiJ_G0031452.1 mouse_genomes_project 7 50727801 51653847 + MGP_WSBEiJ_P0082761 Nell1 protein_coding protein_coding MGP_WSBEiJ_T0082762.1 MGP_WSBEiJ_G0031452.1 mouse_genomes_project 7 50854932 50991090 + Nell1 protein_coding processed_transcript MGP_WSBEiJ_T0084118.1 MGP_WSBEiJ_G0031774.1 mouse_genomes_project 7 105670170 105671115 - MGP_WSBEiJ_P0084118 Olfr569 protein_coding protein_coding MGP_WSBEiJ_T0082623.1 MGP_WSBEiJ_G0031413.1 mouse_genomes_project 7 46591264 46638248 - MGP_WSBEiJ_P0082623 Ush1c protein_coding protein_coding MGP_WSBEiJ_T0082624.1 MGP_WSBEiJ_G0031413.1 mouse_genomes_project 7 46591266 46638276 - MGP_WSBEiJ_P0082624 Ush1c protein_coding protein_coding MGP_WSBEiJ_T0082625.1 MGP_WSBEiJ_G0031413.1 mouse_genomes_project 7 46591273 46638274 - MGP_WSBEiJ_P0082625 Ush1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082626.1 MGP_WSBEiJ_G0031413.1 mouse_genomes_project 7 46591273 46638287 - MGP_WSBEiJ_P0082626 Ush1c protein_coding protein_coding MGP_WSBEiJ_T0082627.1 MGP_WSBEiJ_G0031413.1 mouse_genomes_project 7 46591547 46638248 - MGP_WSBEiJ_P0082627 Ush1c protein_coding protein_coding MGP_WSBEiJ_T0082628.1 MGP_WSBEiJ_G0031413.1 mouse_genomes_project 7 46591566 46638282 - MGP_WSBEiJ_P0082628 Ush1c protein_coding protein_coding MGP_WSBEiJ_T0082629.1 MGP_WSBEiJ_G0031413.1 mouse_genomes_project 7 46591586 46599103 - Ush1c protein_coding retained_intron MGP_WSBEiJ_T0082630.1 MGP_WSBEiJ_G0031413.1 mouse_genomes_project 7 46596942 46618167 - Ush1c protein_coding processed_transcript MGP_WSBEiJ_T0085999.1 MGP_WSBEiJ_G0032297.1 mouse_genomes_project 7 144715721 144719946 + MGP_WSBEiJ_P0085999 Zfp511 protein_coding protein_coding MGP_WSBEiJ_T0015302.1 MGP_WSBEiJ_G0013432.1 mouse_genomes_project 7 44493125 44494053 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083407.1 MGP_WSBEiJ_G0031574.1 mouse_genomes_project 7 82695267 82747245 + MGP_WSBEiJ_P0083407 protein_coding protein_coding MGP_WSBEiJ_T0083408.1 MGP_WSBEiJ_G0031574.1 mouse_genomes_project 7 82735492 82736355 + protein_coding retained_intron MGP_WSBEiJ_T0002275.1 MGP_WSBEiJ_G0002193.1 mouse_genomes_project 7 148121962 148122197 + TEC TEC MGP_WSBEiJ_T0080155.1 MGP_WSBEiJ_G0030734.1 mouse_genomes_project 7 1916773 1922471 - MGP_WSBEiJ_P0080155 Sbk3 protein_coding protein_coding MGP_WSBEiJ_T0080156.1 MGP_WSBEiJ_G0030734.1 mouse_genomes_project 7 1918878 1922678 - MGP_WSBEiJ_P0080156 Sbk3 protein_coding protein_coding MGP_WSBEiJ_T0080254.1 MGP_WSBEiJ_G0030784.1 mouse_genomes_project 7 7801913 7802873 - MGP_WSBEiJ_P0080254 Vmn1r68 protein_coding protein_coding MGP_WSBEiJ_T0101085.1 MGP_WSBEiJ_G0039542.1 mouse_genomes_project 7 87846620 87846940 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100969.1 MGP_WSBEiJ_G0039426.1 mouse_genomes_project 7 9172161 9173126 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100975.1 MGP_WSBEiJ_G0039432.1 mouse_genomes_project 7 9405256 9406245 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084502.1 MGP_WSBEiJ_G0031991.1 mouse_genomes_project 7 113313183 113351349 + MGP_WSBEiJ_P0084502 Ipo7 protein_coding protein_coding MGP_WSBEiJ_T0084111.1 MGP_WSBEiJ_G0031768.1 mouse_genomes_project 7 105481927 105491624 + MGP_WSBEiJ_P0084111 Olfr558 protein_coding protein_coding MGP_WSBEiJ_T0086025.1 MGP_WSBEiJ_G0032304.1 mouse_genomes_project 7 144828556 144845097 + MGP_WSBEiJ_P0086025 Mtg1 protein_coding protein_coding MGP_WSBEiJ_T0086026.1 MGP_WSBEiJ_G0032304.1 mouse_genomes_project 7 144828641 144836662 + Mtg1 protein_coding retained_intron MGP_WSBEiJ_T0086027.1 MGP_WSBEiJ_G0032304.1 mouse_genomes_project 7 144828655 144841782 + Mtg1 protein_coding retained_intron MGP_WSBEiJ_T0086028.1 MGP_WSBEiJ_G0032304.1 mouse_genomes_project 7 144828955 144829557 + Mtg1 protein_coding processed_transcript MGP_WSBEiJ_T0086029.1 MGP_WSBEiJ_G0032304.1 mouse_genomes_project 7 144834722 144841470 + Mtg1 protein_coding retained_intron MGP_WSBEiJ_T0086030.1 MGP_WSBEiJ_G0032304.1 mouse_genomes_project 7 144843268 144844757 + Mtg1 protein_coding processed_transcript MGP_WSBEiJ_T0015281.1 MGP_WSBEiJ_G0013411.1 mouse_genomes_project 7 41057408 41057639 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082486.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45836917 45856124 - MGP_WSBEiJ_P0082486 Nucb1 protein_coding protein_coding MGP_WSBEiJ_T0082487.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45838215 45847299 - MGP_WSBEiJ_P0082487 Nucb1 protein_coding protein_coding MGP_WSBEiJ_T0082488.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45839096 45839533 - Nucb1 protein_coding processed_transcript MGP_WSBEiJ_T0082489.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45839470 45847293 - Nucb1 protein_coding processed_transcript MGP_WSBEiJ_T0082490.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45842210 45842882 - Nucb1 protein_coding retained_intron MGP_WSBEiJ_T0082491.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45842770 45856033 - MGP_WSBEiJ_P0082491 Nucb1 protein_coding protein_coding MGP_WSBEiJ_T0082492.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45845636 45856049 - MGP_WSBEiJ_P0082492 Nucb1 protein_coding protein_coding MGP_WSBEiJ_T0082493.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45847107 45856107 - Nucb1 protein_coding processed_transcript MGP_WSBEiJ_T0082494.1 MGP_WSBEiJ_G0031379.1 mouse_genomes_project 7 45852886 45856103 - Nucb1 protein_coding retained_intron MGP_WSBEiJ_T0084469.1 MGP_WSBEiJ_G0031982.1 mouse_genomes_project 7 112783227 112878863 - MGP_WSBEiJ_P0084469 St5 protein_coding protein_coding MGP_WSBEiJ_T0084470.1 MGP_WSBEiJ_G0031982.1 mouse_genomes_project 7 112783227 112878863 - MGP_WSBEiJ_P0084470 St5 protein_coding protein_coding MGP_WSBEiJ_T0084471.1 MGP_WSBEiJ_G0031982.1 mouse_genomes_project 7 112783236 112878284 - MGP_WSBEiJ_P0084471 St5 protein_coding protein_coding MGP_WSBEiJ_T0084472.1 MGP_WSBEiJ_G0031982.1 mouse_genomes_project 7 112783236 112878284 - MGP_WSBEiJ_P0084472 St5 protein_coding protein_coding MGP_WSBEiJ_T0083731.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100531127 100601846 - MGP_WSBEiJ_P0083731 Myo7a protein_coding protein_coding MGP_WSBEiJ_T0083732.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100531130 100549373 - MGP_WSBEiJ_P0083732 Myo7a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083733.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100531468 100590696 - MGP_WSBEiJ_P0083733 Myo7a protein_coding protein_coding MGP_WSBEiJ_T0083734.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100531694 100600055 - MGP_WSBEiJ_P0083734 Myo7a protein_coding protein_coding MGP_WSBEiJ_T0083735.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100542639 100545205 - Myo7a protein_coding retained_intron MGP_WSBEiJ_T0083736.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100561201 100566140 - Myo7a protein_coding processed_transcript MGP_WSBEiJ_T0083737.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100579105 100594099 - Myo7a protein_coding processed_transcript MGP_WSBEiJ_T0083738.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100579680 100584842 - Myo7a protein_coding processed_transcript MGP_WSBEiJ_T0083739.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100579720 100584841 - Myo7a protein_coding processed_transcript MGP_WSBEiJ_T0083740.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100579729 100601815 - MGP_WSBEiJ_P0083740 Myo7a protein_coding protein_coding MGP_WSBEiJ_T0083741.1 MGP_WSBEiJ_G0031677.1 mouse_genomes_project 7 100590180 100601814 - Myo7a protein_coding processed_transcript MGP_WSBEiJ_T0080866.1 MGP_WSBEiJ_G0030982.1 mouse_genomes_project 7 22691488 22696677 - MGP_WSBEiJ_P0080866 Pinlyp protein_coding protein_coding MGP_WSBEiJ_T0100986.1 MGP_WSBEiJ_G0039443.1 mouse_genomes_project 7 11919203 11919903 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015216.1 MGP_WSBEiJ_G0013346.1 mouse_genomes_project 7 3105213 3109540 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083673.1 MGP_WSBEiJ_G0031666.1 mouse_genomes_project 7 99831480 99853029 + MGP_WSBEiJ_P0083673 Alg8 protein_coding protein_coding MGP_WSBEiJ_T0083674.1 MGP_WSBEiJ_G0031666.1 mouse_genomes_project 7 99847430 99852595 + Alg8 protein_coding retained_intron MGP_WSBEiJ_T0083675.1 MGP_WSBEiJ_G0031666.1 mouse_genomes_project 7 99847687 99852929 + Alg8 protein_coding processed_transcript MGP_WSBEiJ_T0083676.1 MGP_WSBEiJ_G0031666.1 mouse_genomes_project 7 99848015 99852492 + Alg8 protein_coding processed_transcript MGP_WSBEiJ_T0083677.1 MGP_WSBEiJ_G0031666.1 mouse_genomes_project 7 99848835 99852653 + Alg8 protein_coding retained_intron MGP_WSBEiJ_T0083678.1 MGP_WSBEiJ_G0031666.1 mouse_genomes_project 7 99851620 99852736 + Alg8 protein_coding retained_intron MGP_WSBEiJ_T0085803.1 MGP_WSBEiJ_G0032252.1 mouse_genomes_project 7 136980735 137004688 + Lhpp protein_coding processed_transcript MGP_WSBEiJ_T0085804.1 MGP_WSBEiJ_G0032252.1 mouse_genomes_project 7 136980736 137083572 + MGP_WSBEiJ_P0085804 Lhpp protein_coding protein_coding MGP_WSBEiJ_T0085805.1 MGP_WSBEiJ_G0032252.1 mouse_genomes_project 7 136980764 137045691 + Lhpp protein_coding processed_transcript MGP_WSBEiJ_T0085806.1 MGP_WSBEiJ_G0032252.1 mouse_genomes_project 7 136980805 137082929 + Lhpp protein_coding processed_transcript MGP_WSBEiJ_T0085807.1 MGP_WSBEiJ_G0032252.1 mouse_genomes_project 7 137004432 137015652 + Lhpp protein_coding retained_intron MGP_WSBEiJ_T0080447.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13879334 13895209 - MGP_WSBEiJ_P0080447 Ccdc9 protein_coding protein_coding MGP_WSBEiJ_T0080449.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13881367 13883097 - Ccdc9 protein_coding retained_intron MGP_WSBEiJ_T0080450.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13881370 13895170 - MGP_WSBEiJ_P0080450 Ccdc9 protein_coding protein_coding MGP_WSBEiJ_T0080451.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13882789 13893439 - MGP_WSBEiJ_P0080451 Ccdc9 protein_coding protein_coding MGP_WSBEiJ_T0080452.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13882802 13889076 - Ccdc9 protein_coding retained_intron MGP_WSBEiJ_T0080453.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13883195 13885710 - MGP_WSBEiJ_P0080453 Ccdc9 protein_coding protein_coding MGP_WSBEiJ_T0080454.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13883340 13884023 - Ccdc9 protein_coding retained_intron MGP_WSBEiJ_T0080455.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13883919 13889545 - Ccdc9 protein_coding retained_intron MGP_WSBEiJ_T0080456.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13889004 13890185 - Ccdc9 protein_coding processed_transcript MGP_WSBEiJ_T0080457.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13890889 13895160 - MGP_WSBEiJ_P0080457 Ccdc9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080458.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13890898 13893916 - MGP_WSBEiJ_P0080458 Ccdc9 protein_coding protein_coding MGP_WSBEiJ_T0080459.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13890949 13895154 - MGP_WSBEiJ_P0080459 Ccdc9 protein_coding protein_coding MGP_WSBEiJ_T0080460.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13891070 13895153 - Ccdc9 protein_coding retained_intron MGP_WSBEiJ_T0080461.1 MGP_WSBEiJ_G0030854.1 mouse_genomes_project 7 13891203 13894405 - MGP_WSBEiJ_P0080461 Ccdc9 protein_coding protein_coding MGP_WSBEiJ_T0083107.1 MGP_WSBEiJ_G0031524.1 mouse_genomes_project 7 76783371 77080968 + MGP_WSBEiJ_P0083107 Akap13 protein_coding protein_coding MGP_WSBEiJ_T0083108.1 MGP_WSBEiJ_G0031524.1 mouse_genomes_project 7 76864690 77080973 + MGP_WSBEiJ_P0083108 Akap13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0085815.1 MGP_WSBEiJ_G0032254.1 mouse_genomes_project 7 137209145 137234177 - MGP_WSBEiJ_P0085815 Mettl10 protein_coding protein_coding MGP_WSBEiJ_T0085816.1 MGP_WSBEiJ_G0032254.1 mouse_genomes_project 7 137209297 137234120 - MGP_WSBEiJ_P0085816 Mettl10 protein_coding protein_coding MGP_WSBEiJ_T0085817.1 MGP_WSBEiJ_G0032254.1 mouse_genomes_project 7 137209469 137233883 - Mettl10 protein_coding processed_transcript MGP_WSBEiJ_T0085818.1 MGP_WSBEiJ_G0032254.1 mouse_genomes_project 7 137213051 137234119 - MGP_WSBEiJ_P0085818 Mettl10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085819.1 MGP_WSBEiJ_G0032254.1 mouse_genomes_project 7 137213059 137234089 - MGP_WSBEiJ_P0085819 Mettl10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085820.1 MGP_WSBEiJ_G0032254.1 mouse_genomes_project 7 137231611 137234143 - Mettl10 protein_coding processed_transcript MGP_WSBEiJ_T0005109.1 MGP_WSBEiJ_G0004347.1 mouse_genomes_project 7 29586082 29601178 + Gm26935 antisense antisense MGP_WSBEiJ_T0017805.1 MGP_WSBEiJ_G0015104.1 mouse_genomes_project 7 104030196 104040917 - Gm20476 processed_transcript processed_transcript MGP_WSBEiJ_T0098478.1 MGP_WSBEiJ_G0037141.1 mouse_genomes_project 7 46252438 46252523 - Gm22098 snRNA snRNA MGP_WSBEiJ_T0080207.1 MGP_WSBEiJ_G0030759.1 mouse_genomes_project 7 3400988 3430882 + MGP_WSBEiJ_P0080207 Gm6792 protein_coding protein_coding MGP_WSBEiJ_T0080208.1 MGP_WSBEiJ_G0030759.1 mouse_genomes_project 7 3406652 3431089 + Gm6792 protein_coding processed_transcript MGP_WSBEiJ_T0080209.1 MGP_WSBEiJ_G0030759.1 mouse_genomes_project 7 3409705 3430882 + MGP_WSBEiJ_P0080209 Gm6792 protein_coding protein_coding MGP_WSBEiJ_T0085353.1 MGP_WSBEiJ_G0032160.1 mouse_genomes_project 7 131168354 131183411 - MGP_WSBEiJ_P0085353 Qprt protein_coding protein_coding MGP_WSBEiJ_T0085354.1 MGP_WSBEiJ_G0032160.1 mouse_genomes_project 7 131170231 131183226 - Qprt protein_coding processed_transcript MGP_WSBEiJ_T0085355.1 MGP_WSBEiJ_G0032160.1 mouse_genomes_project 7 131176979 131183203 - Qprt protein_coding processed_transcript MGP_WSBEiJ_T0084843.1 MGP_WSBEiJ_G0032064.1 mouse_genomes_project 7 123904770 123916195 + MGP_WSBEiJ_P0084843 Anks4b protein_coding protein_coding MGP_WSBEiJ_T0085102.1 MGP_WSBEiJ_G0032119.1 mouse_genomes_project 7 130466715 130484015 - MGP_WSBEiJ_P0085102 Atp2a1 protein_coding protein_coding MGP_WSBEiJ_T0085103.1 MGP_WSBEiJ_G0032119.1 mouse_genomes_project 7 130466717 130468503 - MGP_WSBEiJ_P0085103 Atp2a1 protein_coding protein_coding MGP_WSBEiJ_T0085104.1 MGP_WSBEiJ_G0032119.1 mouse_genomes_project 7 130466958 130484714 - MGP_WSBEiJ_P0085104 Atp2a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0101079.1 MGP_WSBEiJ_G0039536.1 mouse_genomes_project 7 87430323 87431150 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010709.1 MGP_WSBEiJ_G0008866.1 mouse_genomes_project 7 62744644 62744724 - Mir344-2 miRNA miRNA MGP_WSBEiJ_T0082948.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66600206 66610915 + MGP_WSBEiJ_P0082948 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0082949.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602444 66610906 + MGP_WSBEiJ_P0082949 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0082950.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602453 66610917 + MGP_WSBEiJ_P0082950 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0082951.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602483 66606736 + MGP_WSBEiJ_P0082951 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0082952.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602503 66606883 + MGP_WSBEiJ_P0082952 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0082953.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602512 66610904 + MGP_WSBEiJ_P0082953 Tm2d3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082954.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602513 66610906 + MGP_WSBEiJ_P0082954 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0082955.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602517 66604264 + MGP_WSBEiJ_P0082955 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0082956.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602560 66608156 + MGP_WSBEiJ_P0082956 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0082957.1 MGP_WSBEiJ_G0031495.1 mouse_genomes_project 7 66602560 66606878 + MGP_WSBEiJ_P0082957 Tm2d3 protein_coding protein_coding MGP_WSBEiJ_T0083853.1 MGP_WSBEiJ_G0031710.1 mouse_genomes_project 7 102928342 102962142 + MGP_WSBEiJ_P0083853 P4ha3 protein_coding protein_coding MGP_WSBEiJ_T0083854.1 MGP_WSBEiJ_G0031710.1 mouse_genomes_project 7 102928342 102962142 + MGP_WSBEiJ_P0083854 P4ha3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083855.1 MGP_WSBEiJ_G0031710.1 mouse_genomes_project 7 102928364 102941458 + P4ha3 protein_coding retained_intron MGP_WSBEiJ_T0083856.1 MGP_WSBEiJ_G0031710.1 mouse_genomes_project 7 102936618 102962141 + MGP_WSBEiJ_P0083856 P4ha3 protein_coding protein_coding MGP_WSBEiJ_T0005135.1 MGP_WSBEiJ_G0004367.1 mouse_genomes_project 7 45989219 45992171 - antisense antisense MGP_WSBEiJ_T0005136.1 MGP_WSBEiJ_G0004367.1 mouse_genomes_project 7 45990313 45992439 - antisense antisense MGP_WSBEiJ_T0084146.1 MGP_WSBEiJ_G0031800.1 mouse_genomes_project 7 106266940 106267891 + MGP_WSBEiJ_P0084146 Olfr608 protein_coding protein_coding MGP_WSBEiJ_T0005107.1 MGP_WSBEiJ_G0004346.1 mouse_genomes_project 7 29576713 29598671 + Tmem147os antisense antisense MGP_WSBEiJ_T0005108.1 MGP_WSBEiJ_G0004346.1 mouse_genomes_project 7 29579700 29585929 + Tmem147os antisense antisense MGP_WSBEiJ_T0086514.1 MGP_WSBEiJ_G0032418.1 mouse_genomes_project 7 148884602 148890565 + Gm498 protein_coding processed_transcript MGP_WSBEiJ_T0086515.1 MGP_WSBEiJ_G0032418.1 mouse_genomes_project 7 148886945 148918847 + MGP_WSBEiJ_P0086515 Gm498 protein_coding protein_coding MGP_WSBEiJ_T0086516.1 MGP_WSBEiJ_G0032418.1 mouse_genomes_project 7 148886951 148919858 + MGP_WSBEiJ_P0086516 Gm498 protein_coding protein_coding MGP_WSBEiJ_T0099759.1 MGP_WSBEiJ_G0038422.1 mouse_genomes_project 7 148539323 148539450 - Gm23297 snoRNA snoRNA MGP_WSBEiJ_T0082191.1 MGP_WSBEiJ_G0031306.1 mouse_genomes_project 7 44211033 44215806 + MGP_WSBEiJ_P0082191 protein_coding protein_coding MGP_WSBEiJ_T0010663.1 MGP_WSBEiJ_G0008820.1 mouse_genomes_project 7 21486593 21486703 + Gm25196 miRNA miRNA MGP_WSBEiJ_T0081529.1 MGP_WSBEiJ_G0031150.1 mouse_genomes_project 7 28976370 28988588 + MGP_WSBEiJ_P0081529 Gm5113 protein_coding protein_coding MGP_WSBEiJ_T0017820.1 MGP_WSBEiJ_G0015113.1 mouse_genomes_project 7 131563877 131572448 + B130055M24Rik processed_transcript processed_transcript MGP_WSBEiJ_T0080296.1 MGP_WSBEiJ_G0030808.1 mouse_genomes_project 7 10172278 10182706 + MGP_WSBEiJ_P0080296 Zscan22 protein_coding protein_coding MGP_WSBEiJ_T0080297.1 MGP_WSBEiJ_G0030808.1 mouse_genomes_project 7 10172299 10183550 + MGP_WSBEiJ_P0080297 Zscan22 protein_coding protein_coding MGP_WSBEiJ_T0080298.1 MGP_WSBEiJ_G0030808.1 mouse_genomes_project 7 10172304 10182004 + MGP_WSBEiJ_P0080298 Zscan22 protein_coding protein_coding MGP_WSBEiJ_T0080299.1 MGP_WSBEiJ_G0030808.1 mouse_genomes_project 7 10172330 10182709 + MGP_WSBEiJ_P0080299 Zscan22 protein_coding protein_coding MGP_WSBEiJ_T0084156.1 MGP_WSBEiJ_G0031810.1 mouse_genomes_project 7 106449105 106459002 - MGP_WSBEiJ_P0084156 Olfr624 protein_coding protein_coding MGP_WSBEiJ_T0086517.1 MGP_WSBEiJ_G0032419.1 mouse_genomes_project 7 149010953 149172726 + MGP_WSBEiJ_P0086517 Shank2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086518.1 MGP_WSBEiJ_G0032419.1 mouse_genomes_project 7 149011144 149172868 + MGP_WSBEiJ_P0086518 Shank2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086519.1 MGP_WSBEiJ_G0032419.1 mouse_genomes_project 7 149033734 149472278 + MGP_WSBEiJ_P0086519 Shank2 protein_coding protein_coding MGP_WSBEiJ_T0086520.1 MGP_WSBEiJ_G0032419.1 mouse_genomes_project 7 149217558 149472278 + MGP_WSBEiJ_P0086520 Shank2 protein_coding protein_coding MGP_WSBEiJ_T0086521.1 MGP_WSBEiJ_G0032419.1 mouse_genomes_project 7 149328982 149470459 + MGP_WSBEiJ_P0086521 Shank2 protein_coding protein_coding MGP_WSBEiJ_T0086522.1 MGP_WSBEiJ_G0032419.1 mouse_genomes_project 7 149329036 149472266 + Shank2 protein_coding retained_intron MGP_WSBEiJ_T0086523.1 MGP_WSBEiJ_G0032419.1 mouse_genomes_project 7 149465605 149468448 + Shank2 protein_coding processed_transcript MGP_WSBEiJ_T0085251.1 MGP_WSBEiJ_G0032141.1 mouse_genomes_project 7 130880826 130881855 - MGP_WSBEiJ_P0085251 4930451I11Rik protein_coding protein_coding MGP_WSBEiJ_T0085252.1 MGP_WSBEiJ_G0032141.1 mouse_genomes_project 7 130880827 130881998 - 4930451I11Rik protein_coding processed_transcript MGP_WSBEiJ_T0085253.1 MGP_WSBEiJ_G0032141.1 mouse_genomes_project 7 130880835 130881831 - MGP_WSBEiJ_P0085253 4930451I11Rik protein_coding protein_coding MGP_WSBEiJ_T0081593.1 MGP_WSBEiJ_G0031164.1 mouse_genomes_project 7 29231602 29235530 + MGP_WSBEiJ_P0081593 Tyrobp protein_coding protein_coding MGP_WSBEiJ_T0085756.1 MGP_WSBEiJ_G0032234.1 mouse_genomes_project 7 135221813 135268680 + Htra1 protein_coding retained_intron MGP_WSBEiJ_T0085757.1 MGP_WSBEiJ_G0032234.1 mouse_genomes_project 7 135221905 135274404 + MGP_WSBEiJ_P0085757 Htra1 protein_coding protein_coding MGP_WSBEiJ_T0085758.1 MGP_WSBEiJ_G0032234.1 mouse_genomes_project 7 135230138 135274404 + Htra1 protein_coding processed_transcript MGP_WSBEiJ_T0085759.1 MGP_WSBEiJ_G0032234.1 mouse_genomes_project 7 135270413 135271187 + Htra1 protein_coding retained_intron MGP_WSBEiJ_T0085760.1 MGP_WSBEiJ_G0032234.1 mouse_genomes_project 7 135271473 135274140 + Htra1 protein_coding processed_transcript MGP_WSBEiJ_T0101090.1 MGP_WSBEiJ_G0039547.1 mouse_genomes_project 7 88264715 88265586 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084369.1 MGP_WSBEiJ_G0031910.1 mouse_genomes_project 7 109745226 109746178 - MGP_WSBEiJ_P0084369 Olfr693 protein_coding protein_coding MGP_WSBEiJ_T0081397.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860854 27880093 + MGP_WSBEiJ_P0081397 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081398.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860854 27880093 + MGP_WSBEiJ_P0081398 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081399.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860854 27880093 + MGP_WSBEiJ_P0081399 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081400.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860854 27880093 + MGP_WSBEiJ_P0081400 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081401.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860854 27880093 + MGP_WSBEiJ_P0081401 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081402.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860854 27880093 + MGP_WSBEiJ_P0081402 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081403.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860936 27876855 + Rasgrp4 protein_coding retained_intron MGP_WSBEiJ_T0081404.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860936 27879172 + MGP_WSBEiJ_P0081404 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081405.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860936 27881491 + MGP_WSBEiJ_P0081405 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081406.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860936 27881513 + MGP_WSBEiJ_P0081406 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081407.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27860985 27878527 + Rasgrp4 protein_coding retained_intron MGP_WSBEiJ_T0081408.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27861009 27876090 + MGP_WSBEiJ_P0081408 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0081409.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27861929 27879050 + MGP_WSBEiJ_P0081409 Rasgrp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081410.1 MGP_WSBEiJ_G0031119.1 mouse_genomes_project 7 27877734 27879170 + MGP_WSBEiJ_P0081410 Rasgrp4 protein_coding protein_coding MGP_WSBEiJ_T0084874.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124628244 124700134 + MGP_WSBEiJ_P0084874 Eef2k protein_coding protein_coding MGP_WSBEiJ_T0084875.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124629013 124696924 + MGP_WSBEiJ_P0084875 Eef2k protein_coding protein_coding MGP_WSBEiJ_T0084876.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124629031 124645479 + MGP_WSBEiJ_P0084876 Eef2k protein_coding protein_coding MGP_WSBEiJ_T0084877.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124636619 124691979 + MGP_WSBEiJ_P0084877 Eef2k protein_coding protein_coding MGP_WSBEiJ_T0084878.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124636619 124671922 + MGP_WSBEiJ_P0084878 Eef2k protein_coding protein_coding MGP_WSBEiJ_T0084879.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124636631 124696426 + MGP_WSBEiJ_P0084879 Eef2k protein_coding protein_coding MGP_WSBEiJ_T0084880.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124665482 124671441 + Eef2k protein_coding retained_intron MGP_WSBEiJ_T0084881.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124681265 124686924 + MGP_WSBEiJ_P0084881 Eef2k protein_coding protein_coding MGP_WSBEiJ_T0084882.1 MGP_WSBEiJ_G0032073.1 mouse_genomes_project 7 124683434 124696508 + Eef2k protein_coding processed_transcript MGP_WSBEiJ_T0080210.1 MGP_WSBEiJ_G0030760.1 mouse_genomes_project 7 3435638 3457739 + MGP_WSBEiJ_P0080210 Zfp667 protein_coding protein_coding MGP_WSBEiJ_T0080211.1 MGP_WSBEiJ_G0030760.1 mouse_genomes_project 7 3435652 3450783 + Zfp667 protein_coding processed_transcript MGP_WSBEiJ_T0080212.1 MGP_WSBEiJ_G0030760.1 mouse_genomes_project 7 3435673 3457718 + MGP_WSBEiJ_P0080212 Zfp667 protein_coding protein_coding MGP_WSBEiJ_T0080213.1 MGP_WSBEiJ_G0030760.1 mouse_genomes_project 7 3436919 3457538 + MGP_WSBEiJ_P0080213 Zfp667 protein_coding protein_coding MGP_WSBEiJ_T0080214.1 MGP_WSBEiJ_G0030760.1 mouse_genomes_project 7 3439481 3444471 + Zfp667 protein_coding retained_intron MGP_WSBEiJ_T0098461.1 MGP_WSBEiJ_G0037124.1 mouse_genomes_project 7 1670331 1670433 + Gm24537 snRNA snRNA MGP_WSBEiJ_T0017741.1 MGP_WSBEiJ_G0015083.1 mouse_genomes_project 7 29479607 29504467 - Gm21982 processed_transcript retained_intron MGP_WSBEiJ_T0084393.1 MGP_WSBEiJ_G0031933.1 mouse_genomes_project 7 110190711 110191659 - MGP_WSBEiJ_P0084393 protein_coding protein_coding MGP_WSBEiJ_T0086114.1 MGP_WSBEiJ_G0032345.1 mouse_genomes_project 7 145843942 145846595 + MGP_WSBEiJ_P0086114 Gm17387 protein_coding protein_coding MGP_WSBEiJ_T0081444.1 MGP_WSBEiJ_G0031129.1 mouse_genomes_project 7 28041897 28047238 + MGP_WSBEiJ_P0081444 Ppp1r14a protein_coding protein_coding MGP_WSBEiJ_T0084423.1 MGP_WSBEiJ_G0031956.1 mouse_genomes_project 7 111529768 111530713 - MGP_WSBEiJ_P0084423 Olfr493 protein_coding protein_coding MGP_WSBEiJ_T0015215.1 MGP_WSBEiJ_G0013345.1 mouse_genomes_project 7 3056558 3057507 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100981.1 MGP_WSBEiJ_G0039438.1 mouse_genomes_project 7 10676494 10705790 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084804.1 MGP_WSBEiJ_G0032055.1 mouse_genomes_project 7 123431011 123436681 - MGP_WSBEiJ_P0084804 Thumpd1 protein_coding protein_coding MGP_WSBEiJ_T0100992.1 MGP_WSBEiJ_G0039449.1 mouse_genomes_project 7 12064376 12064766 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015410.1 MGP_WSBEiJ_G0013540.1 mouse_genomes_project 7 131222493 131223431 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010692.1 MGP_WSBEiJ_G0008849.1 mouse_genomes_project 7 54754558 54754687 - Mir6238 miRNA miRNA MGP_WSBEiJ_T0086335.1 MGP_WSBEiJ_G0032387.1 mouse_genomes_project 7 147265716 147279821 - Ifitm10 protein_coding processed_transcript MGP_WSBEiJ_T0086336.1 MGP_WSBEiJ_G0032387.1 mouse_genomes_project 7 147265989 147318020 - MGP_WSBEiJ_P0086336 Ifitm10 protein_coding protein_coding MGP_WSBEiJ_T0086337.1 MGP_WSBEiJ_G0032387.1 mouse_genomes_project 7 147266009 147317848 - Ifitm10 protein_coding processed_transcript MGP_WSBEiJ_T0086338.1 MGP_WSBEiJ_G0032387.1 mouse_genomes_project 7 147299332 147317838 - MGP_WSBEiJ_P0086338 Ifitm10 protein_coding protein_coding MGP_WSBEiJ_T0086339.1 MGP_WSBEiJ_G0032387.1 mouse_genomes_project 7 147299746 147319332 - MGP_WSBEiJ_P0086339 Ifitm10 protein_coding protein_coding MGP_WSBEiJ_T0086340.1 MGP_WSBEiJ_G0032387.1 mouse_genomes_project 7 147316721 147318460 - Ifitm10 protein_coding processed_transcript MGP_WSBEiJ_T0010714.1 MGP_WSBEiJ_G0008871.1 mouse_genomes_project 7 65091060 65091166 + Mir211 miRNA miRNA MGP_WSBEiJ_T0080020.1 MGP_WSBEiJ_G0030705.1 mouse_genomes_project 7 1275685 1307085 - MGP_WSBEiJ_P0080020 Gp6 protein_coding protein_coding MGP_WSBEiJ_T0080021.1 MGP_WSBEiJ_G0030705.1 mouse_genomes_project 7 1279254 1307069 - MGP_WSBEiJ_P0080021 Gp6 protein_coding protein_coding MGP_WSBEiJ_T0086424.1 MGP_WSBEiJ_G0032398.1 mouse_genomes_project 7 147882209 147889513 - MGP_WSBEiJ_P0086424 Th protein_coding protein_coding MGP_WSBEiJ_T0086425.1 MGP_WSBEiJ_G0032398.1 mouse_genomes_project 7 147882209 147923017 - MGP_WSBEiJ_P0086425 Th protein_coding protein_coding MGP_WSBEiJ_T0086426.1 MGP_WSBEiJ_G0032398.1 mouse_genomes_project 7 147882423 147889460 - MGP_WSBEiJ_P0086426 Th protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086427.1 MGP_WSBEiJ_G0032398.1 mouse_genomes_project 7 147883898 147886108 - MGP_WSBEiJ_P0086427 Th protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086428.1 MGP_WSBEiJ_G0032398.1 mouse_genomes_project 7 147883926 147889465 - MGP_WSBEiJ_P0086428 Th protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086429.1 MGP_WSBEiJ_G0032398.1 mouse_genomes_project 7 147886096 147923009 - MGP_WSBEiJ_P0086429 Th protein_coding protein_coding MGP_WSBEiJ_T0002154.1 MGP_WSBEiJ_G0002073.1 mouse_genomes_project 7 15563247 15565419 - TEC TEC MGP_WSBEiJ_T0098474.1 MGP_WSBEiJ_G0037137.1 mouse_genomes_project 7 37723105 37723163 - Gm22203 snRNA snRNA MGP_WSBEiJ_T0079898.1 MGP_WSBEiJ_G0030684.1 mouse_genomes_project 7 296394 325223 + MGP_WSBEiJ_P0079898 Cacng8 protein_coding protein_coding MGP_WSBEiJ_T0079899.1 MGP_WSBEiJ_G0030684.1 mouse_genomes_project 7 299849 325222 + MGP_WSBEiJ_P0079899 Cacng8 protein_coding protein_coding MGP_WSBEiJ_T0079900.1 MGP_WSBEiJ_G0030684.1 mouse_genomes_project 7 300150 300685 + MGP_WSBEiJ_P0079900 Cacng8 protein_coding protein_coding MGP_WSBEiJ_T0084844.1 MGP_WSBEiJ_G0032065.1 mouse_genomes_project 7 123919837 123936721 - MGP_WSBEiJ_P0084844 Crym protein_coding protein_coding MGP_WSBEiJ_T0084845.1 MGP_WSBEiJ_G0032065.1 mouse_genomes_project 7 123930631 123936721 - Crym protein_coding retained_intron MGP_WSBEiJ_T0015371.1 MGP_WSBEiJ_G0013501.1 mouse_genomes_project 7 100960389 100960629 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083799.1 MGP_WSBEiJ_G0031692.1 mouse_genomes_project 7 101897003 101906088 - MGP_WSBEiJ_P0083799 Serpinh1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0080114.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684179 1685411 - MGP_WSBEiJ_P0080114 Cox6b2 protein_coding protein_coding MGP_WSBEiJ_T0080115.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684179 1685482 - MGP_WSBEiJ_P0080115 Cox6b2 protein_coding protein_coding MGP_WSBEiJ_T0080116.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684179 1685411 - MGP_WSBEiJ_P0080116 Cox6b2 protein_coding protein_coding MGP_WSBEiJ_T0080117.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684179 1685360 - MGP_WSBEiJ_P0080117 Cox6b2 protein_coding protein_coding MGP_WSBEiJ_T0080118.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684181 1685397 - MGP_WSBEiJ_P0080118 Cox6b2 protein_coding protein_coding MGP_WSBEiJ_T0080119.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684182 1685411 - MGP_WSBEiJ_P0080119 Cox6b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080120.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684242 1685426 - MGP_WSBEiJ_P0080120 Cox6b2 protein_coding protein_coding MGP_WSBEiJ_T0080121.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684312 1684916 - Cox6b2 protein_coding retained_intron MGP_WSBEiJ_T0080122.1 MGP_WSBEiJ_G0030720.1 mouse_genomes_project 7 1684334 1685390 - MGP_WSBEiJ_P0080122 Cox6b2 protein_coding protein_coding MGP_WSBEiJ_T0098508.1 MGP_WSBEiJ_G0037171.1 mouse_genomes_project 7 121929615 121929720 + Gm23229 snRNA snRNA MGP_WSBEiJ_T0085728.1 MGP_WSBEiJ_G0032229.1 mouse_genomes_project 7 134657376 134787814 - MGP_WSBEiJ_P0085728 Ate1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0085729.1 MGP_WSBEiJ_G0032229.1 mouse_genomes_project 7 134657416 134787892 - MGP_WSBEiJ_P0085729 Ate1 protein_coding protein_coding MGP_WSBEiJ_T0085730.1 MGP_WSBEiJ_G0032229.1 mouse_genomes_project 7 134657416 134787883 - MGP_WSBEiJ_P0085730 Ate1 protein_coding protein_coding MGP_WSBEiJ_T0085731.1 MGP_WSBEiJ_G0032229.1 mouse_genomes_project 7 134660448 134788314 - MGP_WSBEiJ_P0085731 Ate1 protein_coding protein_coding MGP_WSBEiJ_T0085732.1 MGP_WSBEiJ_G0032229.1 mouse_genomes_project 7 134660448 134788314 - MGP_WSBEiJ_P0085732 Ate1 protein_coding protein_coding MGP_WSBEiJ_T0081875.1 MGP_WSBEiJ_G0031222.1 mouse_genomes_project 7 33461069 33471720 - MGP_WSBEiJ_P0081875 Pdcd2l protein_coding protein_coding MGP_WSBEiJ_T0081876.1 MGP_WSBEiJ_G0031222.1 mouse_genomes_project 7 33461203 33471667 - MGP_WSBEiJ_P0081876 Pdcd2l protein_coding protein_coding MGP_WSBEiJ_T0081877.1 MGP_WSBEiJ_G0031222.1 mouse_genomes_project 7 33465439 33467839 - Pdcd2l protein_coding retained_intron MGP_WSBEiJ_T0081878.1 MGP_WSBEiJ_G0031222.1 mouse_genomes_project 7 33467900 33471205 - Pdcd2l protein_coding processed_transcript MGP_WSBEiJ_T0010745.1 MGP_WSBEiJ_G0008902.1 mouse_genomes_project 7 135194662 135194730 + Mir7061 miRNA miRNA MGP_WSBEiJ_T0080786.1 MGP_WSBEiJ_G0030957.1 mouse_genomes_project 7 21676361 21677784 + MGP_WSBEiJ_P0080786 protein_coding protein_coding MGP_WSBEiJ_T0080931.1 MGP_WSBEiJ_G0030998.1 mouse_genomes_project 7 23205353 23208347 - MGP_WSBEiJ_P0080931 Rabac1 protein_coding protein_coding MGP_WSBEiJ_T0080932.1 MGP_WSBEiJ_G0030998.1 mouse_genomes_project 7 23205354 23207577 - Rabac1 protein_coding retained_intron MGP_WSBEiJ_T0080933.1 MGP_WSBEiJ_G0030998.1 mouse_genomes_project 7 23205362 23207619 - Rabac1 protein_coding processed_transcript MGP_WSBEiJ_T0080934.1 MGP_WSBEiJ_G0030998.1 mouse_genomes_project 7 23205362 23208231 - MGP_WSBEiJ_P0080934 Rabac1 protein_coding protein_coding MGP_WSBEiJ_T0080935.1 MGP_WSBEiJ_G0030998.1 mouse_genomes_project 7 23205363 23207820 - Rabac1 protein_coding processed_transcript MGP_WSBEiJ_T0080936.1 MGP_WSBEiJ_G0030998.1 mouse_genomes_project 7 23207092 23208145 - Rabac1 protein_coding retained_intron MGP_WSBEiJ_T0081941.1 MGP_WSBEiJ_G0031234.1 mouse_genomes_project 7 34627960 34682724 - MGP_WSBEiJ_P0081941 Gpatch1 protein_coding protein_coding MGP_WSBEiJ_T0081942.1 MGP_WSBEiJ_G0031234.1 mouse_genomes_project 7 34627968 34682705 - MGP_WSBEiJ_P0081942 Gpatch1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081943.1 MGP_WSBEiJ_G0031234.1 mouse_genomes_project 7 34639624 34682724 - MGP_WSBEiJ_P0081943 Gpatch1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081944.1 MGP_WSBEiJ_G0031234.1 mouse_genomes_project 7 34639657 34641325 - Gpatch1 protein_coding retained_intron MGP_WSBEiJ_T0081945.1 MGP_WSBEiJ_G0031234.1 mouse_genomes_project 7 34667082 34682679 - Gpatch1 protein_coding retained_intron MGP_WSBEiJ_T0082766.1 MGP_WSBEiJ_G0031455.1 mouse_genomes_project 7 52437330 52487091 + MGP_WSBEiJ_P0082766 Slc17a6 protein_coding protein_coding MGP_WSBEiJ_T0084162.1 MGP_WSBEiJ_G0031816.1 mouse_genomes_project 7 106578903 106579854 + MGP_WSBEiJ_P0084162 protein_coding protein_coding MGP_WSBEiJ_T0084166.1 MGP_WSBEiJ_G0031820.1 mouse_genomes_project 7 106646020 106646983 - MGP_WSBEiJ_P0084166 Olfr67 protein_coding protein_coding MGP_WSBEiJ_T0010655.1 MGP_WSBEiJ_G0008812.1 mouse_genomes_project 7 1355286 1355382 - Gm24605 miRNA miRNA MGP_WSBEiJ_T0080169.1 MGP_WSBEiJ_G0030740.1 mouse_genomes_project 7 1986952 1988073 + MGP_WSBEiJ_P0080169 protein_coding protein_coding MGP_WSBEiJ_T0080013.1 MGP_WSBEiJ_G0030701.1 mouse_genomes_project 7 1074211 1076671 - MGP_WSBEiJ_P0080013 Leng9 protein_coding protein_coding MGP_WSBEiJ_T0080469.1 MGP_WSBEiJ_G0030861.1 mouse_genomes_project 7 14127113 14249921 - MGP_WSBEiJ_P0080469 Arhgap35 protein_coding protein_coding MGP_WSBEiJ_T0080470.1 MGP_WSBEiJ_G0030861.1 mouse_genomes_project 7 14129632 14249865 - MGP_WSBEiJ_P0080470 Arhgap35 protein_coding protein_coding MGP_WSBEiJ_T0008815.1 MGP_WSBEiJ_G0007114.1 mouse_genomes_project 7 90478998 90484638 - Gm26522 lincRNA lincRNA MGP_WSBEiJ_T0079985.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044272 1050520 + Ttyh1 protein_coding processed_transcript MGP_WSBEiJ_T0079986.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044394 1061295 + Ttyh1 protein_coding retained_intron MGP_WSBEiJ_T0079987.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044394 1061693 + MGP_WSBEiJ_P0079987 Ttyh1 protein_coding protein_coding MGP_WSBEiJ_T0079988.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044397 1063013 + MGP_WSBEiJ_P0079988 Ttyh1 protein_coding protein_coding MGP_WSBEiJ_T0079989.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044420 1050551 + Ttyh1 protein_coding processed_transcript MGP_WSBEiJ_T0079990.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044449 1061679 + MGP_WSBEiJ_P0079990 Ttyh1 protein_coding protein_coding MGP_WSBEiJ_T0079991.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044452 1050560 + MGP_WSBEiJ_P0079991 Ttyh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079992.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044486 1053312 + MGP_WSBEiJ_P0079992 Ttyh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079993.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1044618 1061676 + MGP_WSBEiJ_P0079993 Ttyh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079994.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1045084 1050492 + Ttyh1 protein_coding processed_transcript MGP_WSBEiJ_T0079995.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1047079 1061753 + Ttyh1 protein_coding retained_intron MGP_WSBEiJ_T0079996.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1049420 1060585 + MGP_WSBEiJ_P0079996 Ttyh1 protein_coding protein_coding MGP_WSBEiJ_T0079997.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1050598 1059765 + Ttyh1 protein_coding processed_transcript MGP_WSBEiJ_T0079998.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1053272 1055164 + Ttyh1 protein_coding retained_intron MGP_WSBEiJ_T0079999.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1054290 1059543 + Ttyh1 protein_coding retained_intron MGP_WSBEiJ_T0080000.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1055708 1058238 + Ttyh1 protein_coding retained_intron MGP_WSBEiJ_T0080001.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1056226 1058382 + Ttyh1 protein_coding retained_intron MGP_WSBEiJ_T0080002.1 MGP_WSBEiJ_G0030699.1 mouse_genomes_project 7 1059375 1060318 + Ttyh1 protein_coding retained_intron MGP_WSBEiJ_T0010670.1 MGP_WSBEiJ_G0008827.1 mouse_genomes_project 7 24958474 24958584 + Gm25947 miRNA miRNA MGP_WSBEiJ_T0084904.1 MGP_WSBEiJ_G0032083.1 mouse_genomes_project 7 125559402 125595116 + MGP_WSBEiJ_P0084904 Scnn1g protein_coding protein_coding MGP_WSBEiJ_T0085966.1 MGP_WSBEiJ_G0032289.1 mouse_genomes_project 7 144238294 144241715 - MGP_WSBEiJ_P0085966 Nkx6-2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085967.1 MGP_WSBEiJ_G0032289.1 mouse_genomes_project 7 144240137 144241708 - MGP_WSBEiJ_P0085967 Nkx6-2 protein_coding protein_coding MGP_WSBEiJ_T0083515.1 MGP_WSBEiJ_G0031605.1 mouse_genomes_project 7 86047225 86213685 - MGP_WSBEiJ_P0083515 Arnt2 protein_coding protein_coding MGP_WSBEiJ_T0008855.1 MGP_WSBEiJ_G0007139.1 mouse_genomes_project 7 120115929 120118110 + 4732496C06Rik lincRNA lincRNA MGP_WSBEiJ_T0008688.1 MGP_WSBEiJ_G0007026.1 mouse_genomes_project 7 33939075 33939792 - Gm44837 lincRNA lincRNA MGP_WSBEiJ_T0085115.1 MGP_WSBEiJ_G0032122.1 mouse_genomes_project 7 130512665 130516026 + MGP_WSBEiJ_P0085115 protein_coding protein_coding MGP_WSBEiJ_T0098468.1 MGP_WSBEiJ_G0037131.1 mouse_genomes_project 7 16607824 16607931 - Gm24464 snRNA snRNA MGP_WSBEiJ_T0002216.1 MGP_WSBEiJ_G0002134.1 mouse_genomes_project 7 76810171 76811567 + TEC TEC MGP_WSBEiJ_T0085160.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130685966 130700406 + Sgf29 protein_coding processed_transcript MGP_WSBEiJ_T0085161.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130685966 130709298 + MGP_WSBEiJ_P0085161 Sgf29 protein_coding protein_coding MGP_WSBEiJ_T0085162.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130685969 130701352 + MGP_WSBEiJ_P0085162 Sgf29 protein_coding protein_coding MGP_WSBEiJ_T0085163.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130685979 130700501 + Sgf29 protein_coding retained_intron MGP_WSBEiJ_T0085164.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130686004 130708254 + Sgf29 protein_coding retained_intron MGP_WSBEiJ_T0085165.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130686059 130708612 + MGP_WSBEiJ_P0085165 Sgf29 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085166.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130697473 130708691 + MGP_WSBEiJ_P0085166 Sgf29 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085167.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130700194 130707061 + Sgf29 protein_coding retained_intron MGP_WSBEiJ_T0085168.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130707949 130708765 + MGP_WSBEiJ_P0085168 Sgf29 protein_coding protein_coding MGP_WSBEiJ_T0085169.1 MGP_WSBEiJ_G0032129.1 mouse_genomes_project 7 130708403 130709152 + Sgf29 protein_coding processed_transcript MGP_WSBEiJ_T0017827.1 MGP_WSBEiJ_G0015117.1 mouse_genomes_project 7 135146360 135151385 - Gm5602 processed_transcript processed_transcript MGP_WSBEiJ_T0099755.1 MGP_WSBEiJ_G0038418.1 mouse_genomes_project 7 139603003 139603136 - Gm24581 snoRNA snoRNA MGP_WSBEiJ_T0002161.1 MGP_WSBEiJ_G0002080.1 mouse_genomes_project 7 33681317 33685198 + TEC TEC MGP_WSBEiJ_T0084426.1 MGP_WSBEiJ_G0031959.1 mouse_genomes_project 7 111693644 111694703 - MGP_WSBEiJ_P0084426 Olfr502 protein_coding protein_coding MGP_WSBEiJ_T0100989.1 MGP_WSBEiJ_G0039446.1 mouse_genomes_project 7 11974352 11974830 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0017750.1 MGP_WSBEiJ_G0015087.1 mouse_genomes_project 7 45277705 45282573 + Gm15545 processed_transcript processed_transcript MGP_WSBEiJ_T0017751.1 MGP_WSBEiJ_G0015087.1 mouse_genomes_project 7 45277732 45285191 + Gm15545 processed_transcript processed_transcript MGP_WSBEiJ_T0017752.1 MGP_WSBEiJ_G0015087.1 mouse_genomes_project 7 45277739 45281762 + Gm15545 processed_transcript processed_transcript MGP_WSBEiJ_T0017753.1 MGP_WSBEiJ_G0015087.1 mouse_genomes_project 7 45277778 45282920 + Gm15545 processed_transcript processed_transcript MGP_WSBEiJ_T0015289.1 MGP_WSBEiJ_G0013419.1 mouse_genomes_project 7 42142888 42143010 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008820.1 MGP_WSBEiJ_G0007119.1 mouse_genomes_project 7 95420289 95451070 - Gm9934 lincRNA lincRNA MGP_WSBEiJ_T0008821.1 MGP_WSBEiJ_G0007119.1 mouse_genomes_project 7 95437423 95450838 - Gm9934 lincRNA lincRNA MGP_WSBEiJ_T0017840.1 MGP_WSBEiJ_G0015124.1 mouse_genomes_project 7 148018143 148049719 - R74862 processed_transcript processed_transcript MGP_WSBEiJ_T0017841.1 MGP_WSBEiJ_G0015124.1 mouse_genomes_project 7 148028987 148049988 - R74862 processed_transcript processed_transcript MGP_WSBEiJ_T0017842.1 MGP_WSBEiJ_G0015124.1 mouse_genomes_project 7 148029649 148049979 - R74862 processed_transcript processed_transcript MGP_WSBEiJ_T0080385.1 MGP_WSBEiJ_G0030835.1 mouse_genomes_project 7 11813131 11839422 - MGP_WSBEiJ_P0080385 Sult2a8 protein_coding protein_coding MGP_WSBEiJ_T0080386.1 MGP_WSBEiJ_G0030835.1 mouse_genomes_project 7 11813134 11846806 - MGP_WSBEiJ_P0080386 Sult2a8 protein_coding protein_coding MGP_WSBEiJ_T0080387.1 MGP_WSBEiJ_G0030835.1 mouse_genomes_project 7 11818588 11846989 - MGP_WSBEiJ_P0080387 Sult2a8 protein_coding protein_coding MGP_WSBEiJ_T0005195.1 MGP_WSBEiJ_G0004408.1 mouse_genomes_project 7 119561375 119561950 + Sox6os antisense antisense MGP_WSBEiJ_T0015229.1 MGP_WSBEiJ_G0013359.1 mouse_genomes_project 7 11164394 11164608 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082407.1 MGP_WSBEiJ_G0031361.1 mouse_genomes_project 7 45524046 45528405 - MGP_WSBEiJ_P0082407 Dkkl1 protein_coding protein_coding MGP_WSBEiJ_T0098515.1 MGP_WSBEiJ_G0037178.1 mouse_genomes_project 7 130592071 130592177 - Gm25579 snRNA snRNA MGP_WSBEiJ_T0002170.1 MGP_WSBEiJ_G0002089.1 mouse_genomes_project 7 36960783 36963077 - TEC TEC MGP_WSBEiJ_T0081115.1 MGP_WSBEiJ_G0031047.1 mouse_genomes_project 7 25665994 25676428 - MGP_WSBEiJ_P0081115 Rab4b protein_coding protein_coding MGP_WSBEiJ_T0081116.1 MGP_WSBEiJ_G0031047.1 mouse_genomes_project 7 25665996 25676342 - MGP_WSBEiJ_P0081116 Rab4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081117.1 MGP_WSBEiJ_G0031047.1 mouse_genomes_project 7 25665997 25676347 - Rab4b protein_coding retained_intron MGP_WSBEiJ_T0081119.1 MGP_WSBEiJ_G0031047.1 mouse_genomes_project 7 25666265 25676420 - Rab4b protein_coding processed_transcript MGP_WSBEiJ_T0081120.1 MGP_WSBEiJ_G0031047.1 mouse_genomes_project 7 25669909 25672023 - Rab4b protein_coding retained_intron MGP_WSBEiJ_T0081121.1 MGP_WSBEiJ_G0031047.1 mouse_genomes_project 7 25670220 25671970 - Rab4b protein_coding processed_transcript MGP_WSBEiJ_T0081122.1 MGP_WSBEiJ_G0031047.1 mouse_genomes_project 7 25673307 25676408 - Rab4b protein_coding processed_transcript MGP_WSBEiJ_T0081123.1 MGP_WSBEiJ_G0031047.1 mouse_genomes_project 7 25673338 25676355 - Rab4b protein_coding processed_transcript MGP_WSBEiJ_T0011482.1 MGP_WSBEiJ_G0009639.1 mouse_genomes_project 7 36224562 36224843 - Gm24550 misc_RNA misc_RNA MGP_WSBEiJ_T0098484.1 MGP_WSBEiJ_G0037147.1 mouse_genomes_project 7 62844588 62844695 - Gm23431 snRNA snRNA MGP_WSBEiJ_T0097455.1 MGP_WSBEiJ_G0036125.1 mouse_genomes_project 7 3561367 3562593 + sense_intronic sense_intronic MGP_WSBEiJ_T0005175.1 MGP_WSBEiJ_G0004394.1 mouse_genomes_project 7 99060884 99094325 - Gm15414 antisense antisense MGP_WSBEiJ_T0081093.1 MGP_WSBEiJ_G0031037.1 mouse_genomes_project 7 25114853 25135856 - MGP_WSBEiJ_P0081093 Cyp2b23 protein_coding protein_coding MGP_WSBEiJ_T0005160.1 MGP_WSBEiJ_G0004384.1 mouse_genomes_project 7 81623552 81625007 - Gm44949 antisense antisense MGP_WSBEiJ_T0081025.1 MGP_WSBEiJ_G0031021.1 mouse_genomes_project 7 23997743 24006585 + MGP_WSBEiJ_P0081025 Exosc5 protein_coding protein_coding MGP_WSBEiJ_T0081026.1 MGP_WSBEiJ_G0031021.1 mouse_genomes_project 7 23997770 24009920 + MGP_WSBEiJ_P0081026 Exosc5 protein_coding protein_coding MGP_WSBEiJ_T0081027.1 MGP_WSBEiJ_G0031021.1 mouse_genomes_project 7 23997791 24006585 + Exosc5 protein_coding retained_intron MGP_WSBEiJ_T0081028.1 MGP_WSBEiJ_G0031021.1 mouse_genomes_project 7 23997791 24004894 + MGP_WSBEiJ_P0081028 Exosc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081029.1 MGP_WSBEiJ_G0031021.1 mouse_genomes_project 7 23997797 24002989 + MGP_WSBEiJ_P0081029 Exosc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081030.1 MGP_WSBEiJ_G0031021.1 mouse_genomes_project 7 24002974 24005362 + Exosc5 protein_coding retained_intron MGP_WSBEiJ_T0080899.1 MGP_WSBEiJ_G0030994.1 mouse_genomes_project 7 23095338 23103555 + MGP_WSBEiJ_P0080899 Dmrtc2 protein_coding protein_coding MGP_WSBEiJ_T0084103.1 MGP_WSBEiJ_G0031760.1 mouse_genomes_project 7 105371444 105372523 - MGP_WSBEiJ_P0084103 Olfr551 protein_coding protein_coding MGP_WSBEiJ_T0015214.1 MGP_WSBEiJ_G0013344.1 mouse_genomes_project 7 2948814 2948946 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084245.1 MGP_WSBEiJ_G0031871.1 mouse_genomes_project 7 107793994 107794951 - MGP_WSBEiJ_P0084245 Olfr668 protein_coding protein_coding MGP_WSBEiJ_T0083516.1 MGP_WSBEiJ_G0031606.1 mouse_genomes_project 7 86386347 86408771 - MGP_WSBEiJ_P0083516 Fah protein_coding protein_coding MGP_WSBEiJ_T0083517.1 MGP_WSBEiJ_G0031606.1 mouse_genomes_project 7 86397323 86409669 - MGP_WSBEiJ_P0083517 Fah protein_coding protein_coding MGP_WSBEiJ_T0083518.1 MGP_WSBEiJ_G0031606.1 mouse_genomes_project 7 86402846 86403870 - Fah protein_coding processed_transcript MGP_WSBEiJ_T0083519.1 MGP_WSBEiJ_G0031606.1 mouse_genomes_project 7 86403390 86408673 - Fah protein_coding retained_intron MGP_WSBEiJ_T0080411.1 MGP_WSBEiJ_G0030847.1 mouse_genomes_project 7 13673088 13692656 + MGP_WSBEiJ_P0080411 Napa protein_coding protein_coding MGP_WSBEiJ_T0080412.1 MGP_WSBEiJ_G0030847.1 mouse_genomes_project 7 13673237 13688217 + Napa protein_coding processed_transcript MGP_WSBEiJ_T0080413.1 MGP_WSBEiJ_G0030847.1 mouse_genomes_project 7 13673261 13687816 + Napa protein_coding retained_intron MGP_WSBEiJ_T0080414.1 MGP_WSBEiJ_G0030847.1 mouse_genomes_project 7 13673267 13683991 + Napa protein_coding processed_transcript MGP_WSBEiJ_T0080415.1 MGP_WSBEiJ_G0030847.1 mouse_genomes_project 7 13683732 13688907 + Napa protein_coding retained_intron MGP_WSBEiJ_T0080416.1 MGP_WSBEiJ_G0030847.1 mouse_genomes_project 7 13688325 13691240 + Napa protein_coding retained_intron MGP_WSBEiJ_T0080417.1 MGP_WSBEiJ_G0030847.1 mouse_genomes_project 7 13689784 13691420 + Napa protein_coding processed_transcript MGP_WSBEiJ_T0010697.1 MGP_WSBEiJ_G0008854.1 mouse_genomes_project 7 62461255 62461324 - Mir344d-1 miRNA miRNA MGP_WSBEiJ_T0081175.1 MGP_WSBEiJ_G0031058.1 mouse_genomes_project 7 25868282 25873020 - MGP_WSBEiJ_P0081175 Gm20479 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085418.1 MGP_WSBEiJ_G0032177.1 mouse_genomes_project 7 131557330 131564400 - MGP_WSBEiJ_P0085418 Zfp689 protein_coding protein_coding MGP_WSBEiJ_T0085419.1 MGP_WSBEiJ_G0032177.1 mouse_genomes_project 7 131558960 131564235 - MGP_WSBEiJ_P0085419 Zfp689 protein_coding protein_coding MGP_WSBEiJ_T0005080.1 MGP_WSBEiJ_G0004324.1 mouse_genomes_project 7 17183555 17184803 + 1700058P15Rik antisense antisense MGP_WSBEiJ_T0101088.1 MGP_WSBEiJ_G0039545.1 mouse_genomes_project 7 88200791 88201688 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082182.1 MGP_WSBEiJ_G0031300.1 mouse_genomes_project 7 44180415 44234892 + MGP_WSBEiJ_P0082182 protein_coding protein_coding MGP_WSBEiJ_T0083850.1 MGP_WSBEiJ_G0031709.1 mouse_genomes_project 7 102860695 102916524 + MGP_WSBEiJ_P0083850 Pgm2l1 protein_coding protein_coding MGP_WSBEiJ_T0083851.1 MGP_WSBEiJ_G0031709.1 mouse_genomes_project 7 102860989 102918593 + MGP_WSBEiJ_P0083851 Pgm2l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083852.1 MGP_WSBEiJ_G0031709.1 mouse_genomes_project 7 102861011 102920052 + MGP_WSBEiJ_P0083852 Pgm2l1 protein_coding protein_coding MGP_WSBEiJ_T0017799.1 MGP_WSBEiJ_G0015102.1 mouse_genomes_project 7 99382623 99421118 - C230038L03Rik processed_transcript antisense MGP_WSBEiJ_T0017800.1 MGP_WSBEiJ_G0015102.1 mouse_genomes_project 7 99394494 99424224 - C230038L03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017801.1 MGP_WSBEiJ_G0015102.1 mouse_genomes_project 7 99421661 99425565 - C230038L03Rik processed_transcript antisense MGP_WSBEiJ_T0017802.1 MGP_WSBEiJ_G0015102.1 mouse_genomes_project 7 99421993 99425971 - C230038L03Rik processed_transcript antisense MGP_WSBEiJ_T0080241.1 MGP_WSBEiJ_G0030774.1 mouse_genomes_project 7 3904660 4168029 + MGP_WSBEiJ_P0080241 Usp29 protein_coding protein_coding MGP_WSBEiJ_T0080242.1 MGP_WSBEiJ_G0030774.1 mouse_genomes_project 7 3904818 4161272 + MGP_WSBEiJ_P0080242 Usp29 protein_coding protein_coding MGP_WSBEiJ_T0080243.1 MGP_WSBEiJ_G0030774.1 mouse_genomes_project 7 4138295 4164325 + MGP_WSBEiJ_P0080243 Usp29 protein_coding protein_coding MGP_WSBEiJ_T0080244.1 MGP_WSBEiJ_G0030774.1 mouse_genomes_project 7 4160677 4163287 + MGP_WSBEiJ_P0080244 Usp29 protein_coding protein_coding MGP_WSBEiJ_T0086442.1 MGP_WSBEiJ_G0032401.1 mouse_genomes_project 7 148049040 148064265 + MGP_WSBEiJ_P0086442 Cd81 protein_coding protein_coding MGP_WSBEiJ_T0086443.1 MGP_WSBEiJ_G0032401.1 mouse_genomes_project 7 148049095 148061944 + Cd81 protein_coding retained_intron MGP_WSBEiJ_T0086444.1 MGP_WSBEiJ_G0032401.1 mouse_genomes_project 7 148054863 148063493 + Cd81 protein_coding processed_transcript MGP_WSBEiJ_T0086445.1 MGP_WSBEiJ_G0032401.1 mouse_genomes_project 7 148062531 148063936 + Cd81 protein_coding retained_intron MGP_WSBEiJ_T0015309.1 MGP_WSBEiJ_G0013439.1 mouse_genomes_project 7 52209096 52209214 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082342.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135516 45140997 + MGP_WSBEiJ_P0082342 Pnkp protein_coding protein_coding MGP_WSBEiJ_T0082343.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135528 45135883 + MGP_WSBEiJ_P0082343 Pnkp protein_coding protein_coding MGP_WSBEiJ_T0082344.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135536 45141339 + MGP_WSBEiJ_P0082344 Pnkp protein_coding protein_coding MGP_WSBEiJ_T0082345.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135544 45141003 + Pnkp protein_coding retained_intron MGP_WSBEiJ_T0082346.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135550 45138771 + MGP_WSBEiJ_P0082346 Pnkp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082347.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135717 45139698 + MGP_WSBEiJ_P0082347 Pnkp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082348.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135719 45140996 + MGP_WSBEiJ_P0082348 Pnkp protein_coding protein_coding MGP_WSBEiJ_T0082349.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135725 45140997 + MGP_WSBEiJ_P0082349 Pnkp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082350.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135756 45140988 + MGP_WSBEiJ_P0082350 Pnkp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082351.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45135771 45140997 + MGP_WSBEiJ_P0082351 Pnkp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082352.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45138017 45140995 + Pnkp protein_coding retained_intron MGP_WSBEiJ_T0082353.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45138769 45139716 + Pnkp protein_coding retained_intron MGP_WSBEiJ_T0082354.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45139721 45140997 + MGP_WSBEiJ_P0082354 Pnkp protein_coding non_stop_decay MGP_WSBEiJ_T0082355.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45139860 45140995 + MGP_WSBEiJ_P0082355 Pnkp protein_coding protein_coding MGP_WSBEiJ_T0082356.1 MGP_WSBEiJ_G0031334.1 mouse_genomes_project 7 45140043 45141017 + Pnkp protein_coding retained_intron MGP_WSBEiJ_T0084398.1 MGP_WSBEiJ_G0031937.1 mouse_genomes_project 7 110471691 110539362 + MGP_WSBEiJ_P0084398 Syt9 protein_coding protein_coding MGP_WSBEiJ_T0084399.1 MGP_WSBEiJ_G0031937.1 mouse_genomes_project 7 110471753 110658817 + MGP_WSBEiJ_P0084399 Syt9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084400.1 MGP_WSBEiJ_G0031937.1 mouse_genomes_project 7 110471753 110658820 + MGP_WSBEiJ_P0084400 Syt9 protein_coding protein_coding MGP_WSBEiJ_T0084401.1 MGP_WSBEiJ_G0031937.1 mouse_genomes_project 7 110608699 110658817 + Syt9 protein_coding retained_intron MGP_WSBEiJ_T0084402.1 MGP_WSBEiJ_G0031937.1 mouse_genomes_project 7 110608733 110658817 + Syt9 protein_coding retained_intron MGP_WSBEiJ_T0085183.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130744417 130748865 - MGP_WSBEiJ_P0085183 Coro1a protein_coding protein_coding MGP_WSBEiJ_T0085184.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130744417 130749461 - MGP_WSBEiJ_P0085184 Coro1a protein_coding protein_coding MGP_WSBEiJ_T0085185.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130744525 130747818 - MGP_WSBEiJ_P0085185 Coro1a protein_coding protein_coding MGP_WSBEiJ_T0085186.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130744955 130745872 - Coro1a protein_coding retained_intron MGP_WSBEiJ_T0085187.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130744999 130745905 - Coro1a protein_coding retained_intron MGP_WSBEiJ_T0085188.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130745635 130746740 - Coro1a protein_coding retained_intron MGP_WSBEiJ_T0085189.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130745636 130747819 - MGP_WSBEiJ_P0085189 Coro1a protein_coding protein_coding MGP_WSBEiJ_T0085190.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130745974 130747117 - Coro1a protein_coding retained_intron MGP_WSBEiJ_T0085191.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130745991 130749399 - MGP_WSBEiJ_P0085191 Coro1a protein_coding protein_coding MGP_WSBEiJ_T0085192.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130746535 130749192 - MGP_WSBEiJ_P0085192 Coro1a protein_coding protein_coding MGP_WSBEiJ_T0085193.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130746546 130752457 - MGP_WSBEiJ_P0085193 Coro1a protein_coding protein_coding MGP_WSBEiJ_T0085194.1 MGP_WSBEiJ_G0032133.1 mouse_genomes_project 7 130747476 130749398 - Coro1a protein_coding retained_intron MGP_WSBEiJ_T0008661.1 MGP_WSBEiJ_G0007002.1 mouse_genomes_project 7 14253568 14254828 - Gm29442 lincRNA lincRNA MGP_WSBEiJ_T0084212.1 MGP_WSBEiJ_G0031852.1 mouse_genomes_project 7 107144826 107163615 - MGP_WSBEiJ_P0084212 protein_coding protein_coding MGP_WSBEiJ_T0084216.1 MGP_WSBEiJ_G0031852.1 mouse_genomes_project 7 107151012 107163602 - MGP_WSBEiJ_P0084216 protein_coding protein_coding MGP_WSBEiJ_T0015418.1 MGP_WSBEiJ_G0013548.1 mouse_genomes_project 7 132884042 132884492 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082700.1 MGP_WSBEiJ_G0031433.1 mouse_genomes_project 7 47556110 47615611 - MGP_WSBEiJ_P0082700 Ptpn5 protein_coding protein_coding MGP_WSBEiJ_T0082701.1 MGP_WSBEiJ_G0031433.1 mouse_genomes_project 7 47556114 47614605 - MGP_WSBEiJ_P0082701 Ptpn5 protein_coding protein_coding MGP_WSBEiJ_T0008844.1 MGP_WSBEiJ_G0007134.1 mouse_genomes_project 7 118334601 118337829 - Gm45017 lincRNA lincRNA MGP_WSBEiJ_T0100988.1 MGP_WSBEiJ_G0039445.1 mouse_genomes_project 7 11950772 11951292 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015406.1 MGP_WSBEiJ_G0013536.1 mouse_genomes_project 7 130768737 130769211 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083910.1 MGP_WSBEiJ_G0031721.1 mouse_genomes_project 7 103511042 103523622 - MGP_WSBEiJ_P0083910 Relt protein_coding protein_coding MGP_WSBEiJ_T0083911.1 MGP_WSBEiJ_G0031721.1 mouse_genomes_project 7 103517036 103533863 - MGP_WSBEiJ_P0083911 Relt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083912.1 MGP_WSBEiJ_G0031721.1 mouse_genomes_project 7 103521618 103526809 - MGP_WSBEiJ_P0083912 Relt protein_coding protein_coding MGP_WSBEiJ_T0083913.1 MGP_WSBEiJ_G0031721.1 mouse_genomes_project 7 103521618 103525936 - MGP_WSBEiJ_P0083913 Relt protein_coding protein_coding MGP_WSBEiJ_T0083914.1 MGP_WSBEiJ_G0031721.1 mouse_genomes_project 7 103521628 103533615 - MGP_WSBEiJ_P0083914 Relt protein_coding protein_coding MGP_WSBEiJ_T0083915.1 MGP_WSBEiJ_G0031721.1 mouse_genomes_project 7 103523563 103533855 - MGP_WSBEiJ_P0083915 Relt protein_coding protein_coding MGP_WSBEiJ_T0101043.1 MGP_WSBEiJ_G0039500.1 mouse_genomes_project 7 44240575 44240792 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081686.1 MGP_WSBEiJ_G0031182.1 mouse_genomes_project 7 29472522 29474759 - MGP_WSBEiJ_P0081686 Etv2 protein_coding protein_coding MGP_WSBEiJ_T0084150.1 MGP_WSBEiJ_G0031804.1 mouse_genomes_project 7 106341478 106342450 - MGP_WSBEiJ_P0084150 protein_coding protein_coding MGP_WSBEiJ_T0082171.1 MGP_WSBEiJ_G0031294.1 mouse_genomes_project 7 44001497 44008162 + MGP_WSBEiJ_P0082171 Klk7 protein_coding protein_coding MGP_WSBEiJ_T0002188.1 MGP_WSBEiJ_G0002107.1 mouse_genomes_project 7 55908114 55910288 + TEC TEC MGP_WSBEiJ_T0085577.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132102286 132121948 + MGP_WSBEiJ_P0085577 Fus protein_coding protein_coding MGP_WSBEiJ_T0085578.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132102319 132118224 + MGP_WSBEiJ_P0085578 Fus protein_coding protein_coding MGP_WSBEiJ_T0085579.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132102320 132110509 + Fus protein_coding retained_intron MGP_WSBEiJ_T0085580.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132102320 132108395 + Fus protein_coding processed_transcript MGP_WSBEiJ_T0085581.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132102320 132118221 + Fus protein_coding retained_intron MGP_WSBEiJ_T0085582.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132102337 132118224 + MGP_WSBEiJ_P0085582 Fus protein_coding protein_coding MGP_WSBEiJ_T0085583.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132107928 132110509 + Fus protein_coding retained_intron MGP_WSBEiJ_T0085584.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132108056 132113453 + Fus protein_coding processed_transcript MGP_WSBEiJ_T0085585.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132110324 132114419 + Fus protein_coding retained_intron MGP_WSBEiJ_T0085586.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132111156 132113015 + Fus protein_coding retained_intron MGP_WSBEiJ_T0085587.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132111865 132116428 + Fus protein_coding retained_intron MGP_WSBEiJ_T0085588.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132113495 132117641 + MGP_WSBEiJ_P0085588 Fus protein_coding protein_coding MGP_WSBEiJ_T0085589.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132114323 132116378 + Fus protein_coding retained_intron MGP_WSBEiJ_T0085590.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132116375 132118199 + MGP_WSBEiJ_P0085590 Fus protein_coding protein_coding MGP_WSBEiJ_T0085591.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132116407 132118021 + Fus protein_coding retained_intron MGP_WSBEiJ_T0085592.1 MGP_WSBEiJ_G0032206.1 mouse_genomes_project 7 132119325 132121948 + MGP_WSBEiJ_P0085592 Fus protein_coding protein_coding MGP_WSBEiJ_T0086126.1 MGP_WSBEiJ_G0032348.1 mouse_genomes_project 7 145922007 145927591 - MGP_WSBEiJ_P0086126 Sigirr protein_coding unknown_likely_coding MGP_WSBEiJ_T0084110.1 MGP_WSBEiJ_G0031767.1 mouse_genomes_project 7 105477812 105478869 + MGP_WSBEiJ_P0084110 Olfr557 protein_coding protein_coding MGP_WSBEiJ_T0017808.1 MGP_WSBEiJ_G0015107.1 mouse_genomes_project 7 119622364 119634553 - 1700003G18Rik processed_transcript sense_overlapping MGP_WSBEiJ_T0017809.1 MGP_WSBEiJ_G0015107.1 mouse_genomes_project 7 119622503 119634500 - 1700003G18Rik processed_transcript sense_overlapping MGP_WSBEiJ_T0017810.1 MGP_WSBEiJ_G0015107.1 mouse_genomes_project 7 119633291 119634492 - 1700003G18Rik processed_transcript retained_intron MGP_WSBEiJ_T0085069.1 MGP_WSBEiJ_G0032114.1 mouse_genomes_project 7 130376164 130383074 - MGP_WSBEiJ_P0085069 Lat protein_coding protein_coding MGP_WSBEiJ_T0085070.1 MGP_WSBEiJ_G0032114.1 mouse_genomes_project 7 130376167 130383067 - MGP_WSBEiJ_P0085070 Lat protein_coding protein_coding MGP_WSBEiJ_T0085071.1 MGP_WSBEiJ_G0032114.1 mouse_genomes_project 7 130376244 130377227 - Lat protein_coding retained_intron MGP_WSBEiJ_T0085072.1 MGP_WSBEiJ_G0032114.1 mouse_genomes_project 7 130381050 130383103 - Lat protein_coding retained_intron MGP_WSBEiJ_T0085073.1 MGP_WSBEiJ_G0032114.1 mouse_genomes_project 7 130381631 130383027 - MGP_WSBEiJ_P0085073 Lat protein_coding protein_coding MGP_WSBEiJ_T0085074.1 MGP_WSBEiJ_G0032114.1 mouse_genomes_project 7 130382189 130382873 - Lat protein_coding retained_intron MGP_WSBEiJ_T0005189.1 MGP_WSBEiJ_G0004403.1 mouse_genomes_project 7 113959358 113972425 - Gm28863 antisense antisense MGP_WSBEiJ_T0005194.1 MGP_WSBEiJ_G0004407.1 mouse_genomes_project 7 119521877 119541646 + Gm45025 antisense antisense MGP_WSBEiJ_T0005559.1 MGP_WSBEiJ_G0004676.1 mouse_genomes_project 7 81428346 81430145 + 5430400D12Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_WSBEiJ_T0083809.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102110790 102187568 + MGP_WSBEiJ_P0083809 Arrb1 protein_coding protein_coding MGP_WSBEiJ_T0083810.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102110790 102187568 + MGP_WSBEiJ_P0083810 Arrb1 protein_coding protein_coding MGP_WSBEiJ_T0083811.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102110986 102184367 + MGP_WSBEiJ_P0083811 Arrb1 protein_coding protein_coding MGP_WSBEiJ_T0083812.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102111028 102169725 + MGP_WSBEiJ_P0083812 Arrb1 protein_coding protein_coding MGP_WSBEiJ_T0083813.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102114993 102168920 + MGP_WSBEiJ_P0083813 Arrb1 protein_coding protein_coding MGP_WSBEiJ_T0083814.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102151088 102168912 + Arrb1 protein_coding processed_transcript MGP_WSBEiJ_T0083815.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102159502 102187461 + MGP_WSBEiJ_P0083815 Arrb1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083816.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102175368 102181934 + Arrb1 protein_coding retained_intron MGP_WSBEiJ_T0083817.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102175389 102181948 + Arrb1 protein_coding retained_intron MGP_WSBEiJ_T0083818.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102175396 102180588 + Arrb1 protein_coding retained_intron MGP_WSBEiJ_T0083819.1 MGP_WSBEiJ_G0031696.1 mouse_genomes_project 7 102175398 102180868 + MGP_WSBEiJ_P0083819 Arrb1 protein_coding protein_coding MGP_WSBEiJ_T0082660.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47195061 47234756 - MGP_WSBEiJ_P0082660 Hps5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082661.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47195061 47235105 - MGP_WSBEiJ_P0082661 Hps5 protein_coding protein_coding MGP_WSBEiJ_T0082662.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47195061 47235077 - MGP_WSBEiJ_P0082662 Hps5 protein_coding protein_coding MGP_WSBEiJ_T0082663.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47195067 47234959 - MGP_WSBEiJ_P0082663 Hps5 protein_coding protein_coding MGP_WSBEiJ_T0082664.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47195583 47234756 - Hps5 protein_coding retained_intron MGP_WSBEiJ_T0082665.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47195833 47207125 - Hps5 protein_coding processed_transcript MGP_WSBEiJ_T0082666.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47197544 47212840 - MGP_WSBEiJ_P0082666 Hps5 protein_coding protein_coding MGP_WSBEiJ_T0082667.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47200945 47209937 - MGP_WSBEiJ_P0082667 Hps5 protein_coding protein_coding MGP_WSBEiJ_T0082668.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47203008 47204490 - Hps5 protein_coding retained_intron MGP_WSBEiJ_T0082669.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47213765 47217538 - Hps5 protein_coding retained_intron MGP_WSBEiJ_T0082670.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47225642 47235142 - MGP_WSBEiJ_P0082670 Hps5 protein_coding protein_coding MGP_WSBEiJ_T0082671.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47227274 47234781 - MGP_WSBEiJ_P0082671 Hps5 protein_coding protein_coding MGP_WSBEiJ_T0082672.1 MGP_WSBEiJ_G0031424.1 mouse_genomes_project 7 47228059 47230094 - Hps5 protein_coding processed_transcript MGP_WSBEiJ_T0084119.1 MGP_WSBEiJ_G0031775.1 mouse_genomes_project 7 105684579 105685624 + MGP_WSBEiJ_P0084119 Olfr570 protein_coding protein_coding MGP_WSBEiJ_T0085318.1 MGP_WSBEiJ_G0032151.1 mouse_genomes_project 7 131041638 131070159 - MGP_WSBEiJ_P0085318 Mvp protein_coding protein_coding MGP_WSBEiJ_T0085319.1 MGP_WSBEiJ_G0032151.1 mouse_genomes_project 7 131054114 131067403 - MGP_WSBEiJ_P0085319 Mvp protein_coding protein_coding MGP_WSBEiJ_T0085321.1 MGP_WSBEiJ_G0032151.1 mouse_genomes_project 7 131065267 131070088 - Mvp protein_coding retained_intron MGP_WSBEiJ_T0002199.1 MGP_WSBEiJ_G0002118.1 mouse_genomes_project 7 65099822 65099972 + TEC TEC MGP_WSBEiJ_T0015381.1 MGP_WSBEiJ_G0013511.1 mouse_genomes_project 7 105930935 105931598 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008670.1 MGP_WSBEiJ_G0007010.1 mouse_genomes_project 7 22818629 22820460 + Gm4598 lincRNA lincRNA MGP_WSBEiJ_T0017723.1 MGP_WSBEiJ_G0015073.1 mouse_genomes_project 7 505702 518220 - Gm15927 processed_transcript antisense MGP_WSBEiJ_T0017724.1 MGP_WSBEiJ_G0015073.1 mouse_genomes_project 7 515892 516835 - Gm15927 processed_transcript antisense MGP_WSBEiJ_T0017725.1 MGP_WSBEiJ_G0015073.1 mouse_genomes_project 7 515893 518188 - Gm15927 processed_transcript retained_intron MGP_WSBEiJ_T0017726.1 MGP_WSBEiJ_G0015073.1 mouse_genomes_project 7 517682 518161 - Gm15927 processed_transcript processed_transcript MGP_WSBEiJ_T0017727.1 MGP_WSBEiJ_G0015073.1 mouse_genomes_project 7 517897 518471 - Gm15927 processed_transcript processed_transcript MGP_WSBEiJ_T0015305.1 MGP_WSBEiJ_G0013435.1 mouse_genomes_project 7 48829158 48829432 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002247.1 MGP_WSBEiJ_G0002165.1 mouse_genomes_project 7 123206814 123209455 + TEC TEC MGP_WSBEiJ_T0100967.1 MGP_WSBEiJ_G0039424.1 mouse_genomes_project 7 9031676 9031854 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015246.1 MGP_WSBEiJ_G0013376.1 mouse_genomes_project 7 22445886 22448656 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010736.1 MGP_WSBEiJ_G0008893.1 mouse_genomes_project 7 121391170 121391275 + Gm24063 miRNA miRNA MGP_WSBEiJ_T0085066.1 MGP_WSBEiJ_G0032113.1 mouse_genomes_project 7 130276016 130298709 + MGP_WSBEiJ_P0085066 Sbk1 protein_coding protein_coding MGP_WSBEiJ_T0085067.1 MGP_WSBEiJ_G0032113.1 mouse_genomes_project 7 130276797 130293623 + MGP_WSBEiJ_P0085067 Sbk1 protein_coding protein_coding MGP_WSBEiJ_T0085068.1 MGP_WSBEiJ_G0032113.1 mouse_genomes_project 7 130294772 130296513 + MGP_WSBEiJ_P0085068 Sbk1 protein_coding protein_coding MGP_WSBEiJ_T0015274.1 MGP_WSBEiJ_G0013404.1 mouse_genomes_project 7 34880892 34884520 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085390.1 MGP_WSBEiJ_G0032166.1 mouse_genomes_project 7 131305808 131310799 + MGP_WSBEiJ_P0085390 Zfp553 protein_coding protein_coding MGP_WSBEiJ_T0085391.1 MGP_WSBEiJ_G0032166.1 mouse_genomes_project 7 131305999 131310663 + MGP_WSBEiJ_P0085391 Zfp553 protein_coding protein_coding MGP_WSBEiJ_T0085392.1 MGP_WSBEiJ_G0032166.1 mouse_genomes_project 7 131306038 131306865 + Zfp553 protein_coding retained_intron MGP_WSBEiJ_T0083831.1 MGP_WSBEiJ_G0031703.1 mouse_genomes_project 7 102461943 102524252 + MGP_WSBEiJ_P0083831 Xrra1 protein_coding protein_coding MGP_WSBEiJ_T0080258.1 MGP_WSBEiJ_G0030786.1 mouse_genomes_project 7 7914023 7964765 + MGP_WSBEiJ_P0080258 Nlrp4b protein_coding protein_coding MGP_WSBEiJ_T0080259.1 MGP_WSBEiJ_G0030786.1 mouse_genomes_project 7 7914051 7964775 + MGP_WSBEiJ_P0080259 Nlrp4b protein_coding protein_coding MGP_WSBEiJ_T0080260.1 MGP_WSBEiJ_G0030786.1 mouse_genomes_project 7 7948217 7960390 + MGP_WSBEiJ_P0080260 Nlrp4b protein_coding protein_coding MGP_WSBEiJ_T0085733.1 MGP_WSBEiJ_G0032230.1 mouse_genomes_project 7 134801555 134817413 - MGP_WSBEiJ_P0085733 Nsmce4a protein_coding protein_coding MGP_WSBEiJ_T0085734.1 MGP_WSBEiJ_G0032230.1 mouse_genomes_project 7 134801565 134805977 - Nsmce4a protein_coding retained_intron MGP_WSBEiJ_T0085735.1 MGP_WSBEiJ_G0032230.1 mouse_genomes_project 7 134803789 134840601 - MGP_WSBEiJ_P0085735 Nsmce4a protein_coding protein_coding MGP_WSBEiJ_T0085736.1 MGP_WSBEiJ_G0032230.1 mouse_genomes_project 7 134805552 134809513 - Nsmce4a protein_coding retained_intron MGP_WSBEiJ_T0085737.1 MGP_WSBEiJ_G0032230.1 mouse_genomes_project 7 134806988 134815978 - MGP_WSBEiJ_P0085737 Nsmce4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085738.1 MGP_WSBEiJ_G0032230.1 mouse_genomes_project 7 134809713 134812814 - Nsmce4a protein_coding retained_intron MGP_WSBEiJ_T0008783.1 MGP_WSBEiJ_G0007099.1 mouse_genomes_project 7 76343453 76386055 + Gm44904 lincRNA lincRNA MGP_WSBEiJ_T0096842.1 MGP_WSBEiJ_G0035523.1 mouse_genomes_project 7 95449922 95451762 + pseudogene pseudogene MGP_WSBEiJ_T0085396.1 MGP_WSBEiJ_G0032168.1 mouse_genomes_project 7 131330109 131333855 - MGP_WSBEiJ_P0085396 Dctpp1 protein_coding protein_coding MGP_WSBEiJ_T0098465.1 MGP_WSBEiJ_G0037128.1 mouse_genomes_project 7 14260646 14260749 - Gm24708 snRNA snRNA MGP_WSBEiJ_T0080340.1 MGP_WSBEiJ_G0030818.1 mouse_genomes_project 7 10337559 10351415 - MGP_WSBEiJ_P0080340 Mzf1 protein_coding protein_coding MGP_WSBEiJ_T0080341.1 MGP_WSBEiJ_G0030818.1 mouse_genomes_project 7 10337563 10350358 - MGP_WSBEiJ_P0080341 Mzf1 protein_coding protein_coding MGP_WSBEiJ_T0080342.1 MGP_WSBEiJ_G0030818.1 mouse_genomes_project 7 10337565 10351015 - Mzf1 protein_coding retained_intron MGP_WSBEiJ_T0080343.1 MGP_WSBEiJ_G0030818.1 mouse_genomes_project 7 10337585 10351188 - MGP_WSBEiJ_P0080343 Mzf1 protein_coding protein_coding MGP_WSBEiJ_T0080344.1 MGP_WSBEiJ_G0030818.1 mouse_genomes_project 7 10343735 10351397 - Mzf1 protein_coding retained_intron MGP_WSBEiJ_T0086052.1 MGP_WSBEiJ_G0032323.1 mouse_genomes_project 7 145404146 145427750 + MGP_WSBEiJ_P0086052 Olfr53 protein_coding protein_coding MGP_WSBEiJ_T0082868.1 MGP_WSBEiJ_G0031475.1 mouse_genomes_project 7 60615842 60642273 - MGP_WSBEiJ_P0082868 Snrpn protein_coding protein_coding MGP_WSBEiJ_T0082869.1 MGP_WSBEiJ_G0031475.1 mouse_genomes_project 7 60615849 60824320 - MGP_WSBEiJ_P0082869 Snrpn protein_coding protein_coding MGP_WSBEiJ_T0083524.1 MGP_WSBEiJ_G0031610.1 mouse_genomes_project 7 86760252 86785078 - MGP_WSBEiJ_P0083524 Vmn2r65 protein_coding protein_coding MGP_WSBEiJ_T0083715.1 MGP_WSBEiJ_G0031673.1 mouse_genomes_project 7 100175175 100197218 + MGP_WSBEiJ_P0083715 Clns1a protein_coding protein_coding MGP_WSBEiJ_T0083716.1 MGP_WSBEiJ_G0031673.1 mouse_genomes_project 7 100175236 100191089 + Clns1a protein_coding retained_intron MGP_WSBEiJ_T0083717.1 MGP_WSBEiJ_G0031673.1 mouse_genomes_project 7 100196133 100199135 + Clns1a protein_coding retained_intron MGP_WSBEiJ_T0084754.1 MGP_WSBEiJ_G0032042.1 mouse_genomes_project 7 122401623 122426243 + MGP_WSBEiJ_P0084754 Ccp110 protein_coding protein_coding MGP_WSBEiJ_T0084755.1 MGP_WSBEiJ_G0032042.1 mouse_genomes_project 7 122404493 122426240 + MGP_WSBEiJ_P0084755 Ccp110 protein_coding protein_coding MGP_WSBEiJ_T0084756.1 MGP_WSBEiJ_G0032042.1 mouse_genomes_project 7 122410817 122426235 + Ccp110 protein_coding retained_intron MGP_WSBEiJ_T0084757.1 MGP_WSBEiJ_G0032042.1 mouse_genomes_project 7 122415177 122426243 + Ccp110 protein_coding retained_intron MGP_WSBEiJ_T0084758.1 MGP_WSBEiJ_G0032042.1 mouse_genomes_project 7 122419479 122421681 + Ccp110 protein_coding retained_intron MGP_WSBEiJ_T0010722.1 MGP_WSBEiJ_G0008879.1 mouse_genomes_project 7 81459584 81459683 + Gm24541 miRNA miRNA MGP_WSBEiJ_T0080407.1 MGP_WSBEiJ_G0030844.1 mouse_genomes_project 7 13514479 13538309 - MGP_WSBEiJ_P0080407 Ehd2 protein_coding protein_coding MGP_WSBEiJ_T0080408.1 MGP_WSBEiJ_G0030844.1 mouse_genomes_project 7 13527112 13538217 - MGP_WSBEiJ_P0080408 Ehd2 protein_coding protein_coding MGP_WSBEiJ_T0084102.1 MGP_WSBEiJ_G0031759.1 mouse_genomes_project 7 105362223 105363261 + MGP_WSBEiJ_P0084102 Olfr550 protein_coding protein_coding MGP_WSBEiJ_T0005137.1 MGP_WSBEiJ_G0004368.1 mouse_genomes_project 7 46983219 47004066 + Gm15700 antisense antisense MGP_WSBEiJ_T0082154.1 MGP_WSBEiJ_G0031286.1 mouse_genomes_project 7 43849970 43856184 + MGP_WSBEiJ_P0082154 Ctu1 protein_coding protein_coding MGP_WSBEiJ_T0015337.1 MGP_WSBEiJ_G0013467.1 mouse_genomes_project 7 76200177 76200980 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081143.1 MGP_WSBEiJ_G0031053.1 mouse_genomes_project 7 25736898 25765005 + MGP_WSBEiJ_P0081143 Coq8b protein_coding protein_coding MGP_WSBEiJ_T0081144.1 MGP_WSBEiJ_G0031053.1 mouse_genomes_project 7 25737088 25764999 + MGP_WSBEiJ_P0081144 Coq8b protein_coding protein_coding MGP_WSBEiJ_T0081145.1 MGP_WSBEiJ_G0031053.1 mouse_genomes_project 7 25737237 25765000 + MGP_WSBEiJ_P0081145 Coq8b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081146.1 MGP_WSBEiJ_G0031053.1 mouse_genomes_project 7 25745215 25750868 + Coq8b protein_coding processed_transcript MGP_WSBEiJ_T0081147.1 MGP_WSBEiJ_G0031053.1 mouse_genomes_project 7 25745476 25748280 + Coq8b protein_coding retained_intron MGP_WSBEiJ_T0081148.1 MGP_WSBEiJ_G0031053.1 mouse_genomes_project 7 25757228 25764998 + Coq8b protein_coding retained_intron MGP_WSBEiJ_T0081149.1 MGP_WSBEiJ_G0031053.1 mouse_genomes_project 7 25757430 25764461 + Coq8b protein_coding processed_transcript MGP_WSBEiJ_T0015424.1 MGP_WSBEiJ_G0013554.1 mouse_genomes_project 7 144455733 144456205 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084581.1 MGP_WSBEiJ_G0032008.1 mouse_genomes_project 7 115752548 115803578 + MGP_WSBEiJ_P0084581 Micalcl protein_coding protein_coding MGP_WSBEiJ_T0084582.1 MGP_WSBEiJ_G0032008.1 mouse_genomes_project 7 115764832 115785808 + MGP_WSBEiJ_P0084582 Micalcl protein_coding protein_coding MGP_WSBEiJ_T0084583.1 MGP_WSBEiJ_G0032008.1 mouse_genomes_project 7 115765355 115803572 + MGP_WSBEiJ_P0084583 Micalcl protein_coding protein_coding MGP_WSBEiJ_T0084584.1 MGP_WSBEiJ_G0032008.1 mouse_genomes_project 7 115771630 115803572 + MGP_WSBEiJ_P0084584 Micalcl protein_coding protein_coding MGP_WSBEiJ_T0084585.1 MGP_WSBEiJ_G0032008.1 mouse_genomes_project 7 115797585 115803523 + Micalcl protein_coding retained_intron MGP_WSBEiJ_T0080881.1 MGP_WSBEiJ_G0030985.1 mouse_genomes_project 7 22736986 22766628 + MGP_WSBEiJ_P0080881 Ethe1 protein_coding protein_coding MGP_WSBEiJ_T0083791.1 MGP_WSBEiJ_G0031689.1 mouse_genomes_project 7 101699249 101727867 - MGP_WSBEiJ_P0083791 Dgat2 protein_coding protein_coding MGP_WSBEiJ_T0005089.1 MGP_WSBEiJ_G0004333.1 mouse_genomes_project 7 23492009 23493580 + 9130221H12Rik antisense antisense MGP_WSBEiJ_T0005090.1 MGP_WSBEiJ_G0004333.1 mouse_genomes_project 7 23492045 23493586 + 9130221H12Rik antisense antisense MGP_WSBEiJ_T0082389.1 MGP_WSBEiJ_G0031354.1 mouse_genomes_project 7 45441888 45450990 - MGP_WSBEiJ_P0082389 protein_coding protein_coding MGP_WSBEiJ_T0008894.1 MGP_WSBEiJ_G0007165.1 mouse_genomes_project 7 133887297 133973251 + Gm44868 lincRNA lincRNA MGP_WSBEiJ_T0008895.1 MGP_WSBEiJ_G0007165.1 mouse_genomes_project 7 133887384 133891091 + Gm44868 lincRNA lincRNA MGP_WSBEiJ_T0084181.1 MGP_WSBEiJ_G0031835.1 mouse_genomes_project 7 106893425 106894370 - MGP_WSBEiJ_P0084181 Olfr640 protein_coding protein_coding MGP_WSBEiJ_T0101108.1 MGP_WSBEiJ_G0039565.1 mouse_genomes_project 7 106713643 106713772 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002240.1 MGP_WSBEiJ_G0002158.1 mouse_genomes_project 7 82197821 82198371 - TEC TEC MGP_WSBEiJ_T0098516.1 MGP_WSBEiJ_G0037179.1 mouse_genomes_project 7 130966767 130966874 - Gm23445 snRNA snRNA MGP_WSBEiJ_T0101019.1 MGP_WSBEiJ_G0039476.1 mouse_genomes_project 7 32729572 32730758 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080193.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3311552 3326843 + MGP_WSBEiJ_P0080193 Zfp444 protein_coding protein_coding MGP_WSBEiJ_T0080194.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3311808 3334004 + MGP_WSBEiJ_P0080194 Zfp444 protein_coding protein_coding MGP_WSBEiJ_T0080195.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3311828 3334925 + MGP_WSBEiJ_P0080195 Zfp444 protein_coding protein_coding MGP_WSBEiJ_T0080196.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3311839 3334003 + MGP_WSBEiJ_P0080196 Zfp444 protein_coding protein_coding MGP_WSBEiJ_T0080197.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3313132 3326715 + MGP_WSBEiJ_P0080197 Zfp444 protein_coding protein_coding MGP_WSBEiJ_T0080198.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3313305 3327323 + Zfp444 protein_coding processed_transcript MGP_WSBEiJ_T0080199.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3313360 3333422 + MGP_WSBEiJ_P0080199 Zfp444 protein_coding protein_coding MGP_WSBEiJ_T0080200.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3324376 3331734 + MGP_WSBEiJ_P0080200 Zfp444 protein_coding protein_coding MGP_WSBEiJ_T0080201.1 MGP_WSBEiJ_G0030756.1 mouse_genomes_project 7 3326467 3331809 + MGP_WSBEiJ_P0080201 Zfp444 protein_coding protein_coding MGP_WSBEiJ_T0098463.1 MGP_WSBEiJ_G0037126.1 mouse_genomes_project 7 10205542 10205650 + Gm26325 snRNA snRNA MGP_WSBEiJ_T0099738.1 MGP_WSBEiJ_G0038401.1 mouse_genomes_project 7 105519817 105519950 - Gm24210 snoRNA snoRNA MGP_WSBEiJ_T0082062.1 MGP_WSBEiJ_G0031258.1 mouse_genomes_project 7 41222196 41253998 - MGP_WSBEiJ_P0082062 AW146154 protein_coding protein_coding MGP_WSBEiJ_T0082063.1 MGP_WSBEiJ_G0031258.1 mouse_genomes_project 7 41226061 41227193 - AW146154 protein_coding retained_intron MGP_WSBEiJ_T0085679.1 MGP_WSBEiJ_G0032224.1 mouse_genomes_project 7 132887778 132936153 - MGP_WSBEiJ_P0085679 Mcmbp protein_coding protein_coding MGP_WSBEiJ_T0085680.1 MGP_WSBEiJ_G0032224.1 mouse_genomes_project 7 132889171 132936144 - MGP_WSBEiJ_P0085680 Mcmbp protein_coding protein_coding MGP_WSBEiJ_T0085681.1 MGP_WSBEiJ_G0032224.1 mouse_genomes_project 7 132889591 132890624 - Mcmbp protein_coding processed_transcript MGP_WSBEiJ_T0085682.1 MGP_WSBEiJ_G0032224.1 mouse_genomes_project 7 132890727 132895490 - Mcmbp protein_coding retained_intron MGP_WSBEiJ_T0085683.1 MGP_WSBEiJ_G0032224.1 mouse_genomes_project 7 132906169 132908417 - Mcmbp protein_coding retained_intron MGP_WSBEiJ_T0099744.1 MGP_WSBEiJ_G0038407.1 mouse_genomes_project 7 114421862 114422030 - Gm23262 snoRNA snoRNA MGP_WSBEiJ_T0085549.1 MGP_WSBEiJ_G0032199.1 mouse_genomes_project 7 132014939 132020067 - MGP_WSBEiJ_P0085549 Prss53 protein_coding protein_coding MGP_WSBEiJ_T0085550.1 MGP_WSBEiJ_G0032199.1 mouse_genomes_project 7 132015191 132020064 - MGP_WSBEiJ_P0085550 Prss53 protein_coding protein_coding MGP_WSBEiJ_T0082087.1 MGP_WSBEiJ_G0031266.1 mouse_genomes_project 7 43367758 43367881 + MGP_WSBEiJ_P0082087 protein_coding protein_coding MGP_WSBEiJ_T0084455.1 MGP_WSBEiJ_G0031979.1 mouse_genomes_project 7 112511753 112677999 - Stk33 protein_coding processed_transcript MGP_WSBEiJ_T0084456.1 MGP_WSBEiJ_G0031979.1 mouse_genomes_project 7 112511753 112677994 - MGP_WSBEiJ_P0084456 Stk33 protein_coding protein_coding MGP_WSBEiJ_T0084457.1 MGP_WSBEiJ_G0031979.1 mouse_genomes_project 7 112511753 112677735 - MGP_WSBEiJ_P0084457 Stk33 protein_coding protein_coding MGP_WSBEiJ_T0084458.1 MGP_WSBEiJ_G0031979.1 mouse_genomes_project 7 112511753 112677999 - MGP_WSBEiJ_P0084458 Stk33 protein_coding protein_coding MGP_WSBEiJ_T0084459.1 MGP_WSBEiJ_G0031979.1 mouse_genomes_project 7 112512125 112677916 - MGP_WSBEiJ_P0084459 Stk33 protein_coding protein_coding MGP_WSBEiJ_T0082317.1 MGP_WSBEiJ_G0031331.1 mouse_genomes_project 7 45093168 45109487 + MGP_WSBEiJ_P0082317 Il4i1 protein_coding protein_coding MGP_WSBEiJ_T0082318.1 MGP_WSBEiJ_G0031331.1 mouse_genomes_project 7 45093450 45119301 + MGP_WSBEiJ_P0082318 Il4i1 protein_coding protein_coding MGP_WSBEiJ_T0082319.1 MGP_WSBEiJ_G0031331.1 mouse_genomes_project 7 45093467 45111628 + Il4i1 protein_coding processed_transcript MGP_WSBEiJ_T0082320.1 MGP_WSBEiJ_G0031331.1 mouse_genomes_project 7 45114783 45119306 + MGP_WSBEiJ_P0082320 Il4i1 protein_coding protein_coding MGP_WSBEiJ_T0082321.1 MGP_WSBEiJ_G0031331.1 mouse_genomes_project 7 45114787 45116793 + Il4i1 protein_coding retained_intron MGP_WSBEiJ_T0082322.1 MGP_WSBEiJ_G0031331.1 mouse_genomes_project 7 45117187 45118278 + Il4i1 protein_coding retained_intron MGP_WSBEiJ_T0082323.1 MGP_WSBEiJ_G0031331.1 mouse_genomes_project 7 45117694 45118265 + MGP_WSBEiJ_P0082323 Il4i1 protein_coding protein_coding MGP_WSBEiJ_T0002183.1 MGP_WSBEiJ_G0002102.1 mouse_genomes_project 7 46760236 46760752 + TEC TEC MGP_WSBEiJ_T0085610.1 MGP_WSBEiJ_G0032212.1 mouse_genomes_project 7 132304300 132366242 + MGP_WSBEiJ_P0085610 protein_coding protein_coding MGP_WSBEiJ_T0085611.1 MGP_WSBEiJ_G0032212.1 mouse_genomes_project 7 132329518 132366245 + MGP_WSBEiJ_P0085611 protein_coding protein_coding MGP_WSBEiJ_T0085612.1 MGP_WSBEiJ_G0032212.1 mouse_genomes_project 7 132329527 132366242 + MGP_WSBEiJ_P0085612 protein_coding protein_coding MGP_WSBEiJ_T0085613.1 MGP_WSBEiJ_G0032212.1 mouse_genomes_project 7 132364356 132366245 + MGP_WSBEiJ_P0085613 protein_coding protein_coding MGP_WSBEiJ_T0085614.1 MGP_WSBEiJ_G0032212.1 mouse_genomes_project 7 132364618 132385272 + MGP_WSBEiJ_P0085614 protein_coding protein_coding MGP_WSBEiJ_T0080582.1 MGP_WSBEiJ_G0030898.1 mouse_genomes_project 7 16904515 16907251 + MGP_WSBEiJ_P0080582 Irf2bp1 protein_coding protein_coding MGP_WSBEiJ_T0015228.1 MGP_WSBEiJ_G0013358.1 mouse_genomes_project 7 11164394 11164572 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080745.1 MGP_WSBEiJ_G0030940.1 mouse_genomes_project 7 17679907 17719230 - MGP_WSBEiJ_P0080745 Nectin2 protein_coding protein_coding MGP_WSBEiJ_T0080746.1 MGP_WSBEiJ_G0030940.1 mouse_genomes_project 7 17690524 17719230 - MGP_WSBEiJ_P0080746 Nectin2 protein_coding protein_coding MGP_WSBEiJ_T0008780.1 MGP_WSBEiJ_G0007097.1 mouse_genomes_project 7 76087425 76092687 + Gm30459 lincRNA lincRNA MGP_WSBEiJ_T0080539.1 MGP_WSBEiJ_G0030877.1 mouse_genomes_project 7 14706705 14746369 - MGP_WSBEiJ_P0080539 Hif3a protein_coding protein_coding MGP_WSBEiJ_T0080540.1 MGP_WSBEiJ_G0030877.1 mouse_genomes_project 7 14710932 14734734 - MGP_WSBEiJ_P0080540 Hif3a protein_coding protein_coding MGP_WSBEiJ_T0080541.1 MGP_WSBEiJ_G0030877.1 mouse_genomes_project 7 14725334 14726850 - MGP_WSBEiJ_P0080541 Hif3a protein_coding protein_coding MGP_WSBEiJ_T0080542.1 MGP_WSBEiJ_G0030877.1 mouse_genomes_project 7 14728264 14746326 - MGP_WSBEiJ_P0080542 Hif3a protein_coding protein_coding MGP_WSBEiJ_T0082874.1 MGP_WSBEiJ_G0031480.1 mouse_genomes_project 7 63304080 63306709 - MGP_WSBEiJ_P0082874 Peg12 protein_coding protein_coding MGP_WSBEiJ_T0011487.1 MGP_WSBEiJ_G0009644.1 mouse_genomes_project 7 76598411 76598734 + Gm24858 misc_RNA misc_RNA MGP_WSBEiJ_T0002251.1 MGP_WSBEiJ_G0002169.1 mouse_genomes_project 7 126008148 126009155 - TEC TEC MGP_WSBEiJ_T0082144.1 MGP_WSBEiJ_G0031282.1 mouse_genomes_project 7 43755734 43769191 + MGP_WSBEiJ_P0082144 Zfp719 protein_coding protein_coding MGP_WSBEiJ_T0082145.1 MGP_WSBEiJ_G0031282.1 mouse_genomes_project 7 43755743 43765532 + MGP_WSBEiJ_P0082145 Zfp719 protein_coding protein_coding MGP_WSBEiJ_T0082146.1 MGP_WSBEiJ_G0031282.1 mouse_genomes_project 7 43755763 43760602 + Zfp719 protein_coding retained_intron MGP_WSBEiJ_T0101067.1 MGP_WSBEiJ_G0039524.1 mouse_genomes_project 7 49381438 49382432 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0101097.1 MGP_WSBEiJ_G0039554.1 mouse_genomes_project 7 105326849 105327784 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0101071.1 MGP_WSBEiJ_G0039528.1 mouse_genomes_project 7 86861021 86861545 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081411.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880058 27883722 - MGP_WSBEiJ_P0081411 Fam98c protein_coding protein_coding MGP_WSBEiJ_T0081412.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880061 27883762 - MGP_WSBEiJ_P0081412 Fam98c protein_coding protein_coding MGP_WSBEiJ_T0081413.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880062 27883735 - Fam98c protein_coding retained_intron MGP_WSBEiJ_T0081414.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880062 27883755 - Fam98c protein_coding retained_intron MGP_WSBEiJ_T0081415.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880062 27883735 - Fam98c protein_coding retained_intron MGP_WSBEiJ_T0081416.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880069 27883712 - MGP_WSBEiJ_P0081416 Fam98c protein_coding protein_coding MGP_WSBEiJ_T0081417.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880104 27883271 - MGP_WSBEiJ_P0081417 Fam98c protein_coding protein_coding MGP_WSBEiJ_T0081418.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880944 27883786 - MGP_WSBEiJ_P0081418 Fam98c protein_coding protein_coding MGP_WSBEiJ_T0081419.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27880975 27883155 - MGP_WSBEiJ_P0081419 Fam98c protein_coding protein_coding MGP_WSBEiJ_T0081420.1 MGP_WSBEiJ_G0031120.1 mouse_genomes_project 7 27881058 27883755 - Fam98c protein_coding processed_transcript MGP_WSBEiJ_T0082464.1 MGP_WSBEiJ_G0031370.1 mouse_genomes_project 7 45739699 45745114 + MGP_WSBEiJ_P0082464 Kcna7 protein_coding protein_coding MGP_WSBEiJ_T0080937.1 MGP_WSBEiJ_G0030999.1 mouse_genomes_project 7 23217987 23245463 - MGP_WSBEiJ_P0080937 Atp1a3 protein_coding protein_coding MGP_WSBEiJ_T0080938.1 MGP_WSBEiJ_G0030999.1 mouse_genomes_project 7 23217987 23245526 - MGP_WSBEiJ_P0080938 Atp1a3 protein_coding protein_coding MGP_WSBEiJ_T0080939.1 MGP_WSBEiJ_G0030999.1 mouse_genomes_project 7 23217990 23245511 - MGP_WSBEiJ_P0080939 Atp1a3 protein_coding protein_coding MGP_WSBEiJ_T0080940.1 MGP_WSBEiJ_G0030999.1 mouse_genomes_project 7 23231949 23245475 - Atp1a3 protein_coding retained_intron MGP_WSBEiJ_T0080941.1 MGP_WSBEiJ_G0030999.1 mouse_genomes_project 7 23240159 23245525 - Atp1a3 protein_coding retained_intron MGP_WSBEiJ_T0082315.1 MGP_WSBEiJ_G0031330.1 mouse_genomes_project 7 45088817 45092204 - MGP_WSBEiJ_P0082315 Atf5 protein_coding protein_coding MGP_WSBEiJ_T0082316.1 MGP_WSBEiJ_G0031330.1 mouse_genomes_project 7 45088818 45093680 - MGP_WSBEiJ_P0082316 Atf5 protein_coding protein_coding MGP_WSBEiJ_T0085075.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130383590 130390616 - MGP_WSBEiJ_P0085075 Spns1 protein_coding protein_coding MGP_WSBEiJ_T0085076.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130383599 130390950 - Spns1 protein_coding retained_intron MGP_WSBEiJ_T0085077.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130383599 130390950 - MGP_WSBEiJ_P0085077 Spns1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085078.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130383599 130390950 - MGP_WSBEiJ_P0085078 Spns1 protein_coding protein_coding MGP_WSBEiJ_T0085079.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130384279 130390568 - MGP_WSBEiJ_P0085079 Spns1 protein_coding protein_coding MGP_WSBEiJ_T0085080.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130384764 130386464 - Spns1 protein_coding retained_intron MGP_WSBEiJ_T0085081.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130385124 130390634 - MGP_WSBEiJ_P0085081 Spns1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085082.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130385408 130386107 - Spns1 protein_coding retained_intron MGP_WSBEiJ_T0085083.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130386289 130390746 - MGP_WSBEiJ_P0085083 Spns1 protein_coding protein_coding MGP_WSBEiJ_T0085084.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130387199 130387903 - Spns1 protein_coding retained_intron MGP_WSBEiJ_T0085085.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130387815 130390267 - Spns1 protein_coding processed_transcript MGP_WSBEiJ_T0085086.1 MGP_WSBEiJ_G0032115.1 mouse_genomes_project 7 130390236 130390960 - Spns1 protein_coding processed_transcript MGP_WSBEiJ_T0082291.1 MGP_WSBEiJ_G0031323.1 mouse_genomes_project 7 44843209 44856999 + MGP_WSBEiJ_P0082291 Kcnc3 protein_coding protein_coding MGP_WSBEiJ_T0082292.1 MGP_WSBEiJ_G0031323.1 mouse_genomes_project 7 44843209 44856999 + MGP_WSBEiJ_P0082292 Kcnc3 protein_coding protein_coding MGP_WSBEiJ_T0082293.1 MGP_WSBEiJ_G0031323.1 mouse_genomes_project 7 44843334 44857005 + MGP_WSBEiJ_P0082293 Kcnc3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0098460.1 MGP_WSBEiJ_G0037123.1 mouse_genomes_project 7 1012010 1012182 + Gm23741 snRNA snRNA MGP_WSBEiJ_T0081767.1 MGP_WSBEiJ_G0031201.1 mouse_genomes_project 7 29844615 29860287 - MGP_WSBEiJ_P0081767 Lsr protein_coding protein_coding MGP_WSBEiJ_T0081768.1 MGP_WSBEiJ_G0031201.1 mouse_genomes_project 7 29844620 29860325 - MGP_WSBEiJ_P0081768 Lsr protein_coding protein_coding MGP_WSBEiJ_T0081769.1 MGP_WSBEiJ_G0031201.1 mouse_genomes_project 7 29844622 29860288 - MGP_WSBEiJ_P0081769 Lsr protein_coding protein_coding MGP_WSBEiJ_T0081770.1 MGP_WSBEiJ_G0031201.1 mouse_genomes_project 7 29844624 29860183 - MGP_WSBEiJ_P0081770 Lsr protein_coding protein_coding MGP_WSBEiJ_T0081771.1 MGP_WSBEiJ_G0031201.1 mouse_genomes_project 7 29845107 29860276 - MGP_WSBEiJ_P0081771 Lsr protein_coding protein_coding MGP_WSBEiJ_T0005121.1 MGP_WSBEiJ_G0004357.1 mouse_genomes_project 7 34462062 34463628 - Gm45091 antisense antisense MGP_WSBEiJ_T0010757.1 MGP_WSBEiJ_G0008914.1 mouse_genomes_project 7 148808816 148808882 + Gm22064 miRNA miRNA MGP_WSBEiJ_T0083260.1 MGP_WSBEiJ_G0031554.1 mouse_genomes_project 7 81791480 81796888 - MGP_WSBEiJ_P0083260 Cib1 protein_coding protein_coding MGP_WSBEiJ_T0083261.1 MGP_WSBEiJ_G0031554.1 mouse_genomes_project 7 81791488 81796952 - MGP_WSBEiJ_P0083261 Cib1 protein_coding protein_coding MGP_WSBEiJ_T0083262.1 MGP_WSBEiJ_G0031554.1 mouse_genomes_project 7 81791488 81796893 - MGP_WSBEiJ_P0083262 Cib1 protein_coding protein_coding MGP_WSBEiJ_T0083263.1 MGP_WSBEiJ_G0031554.1 mouse_genomes_project 7 81792161 81794688 - Cib1 protein_coding retained_intron MGP_WSBEiJ_T0083264.1 MGP_WSBEiJ_G0031554.1 mouse_genomes_project 7 81792485 81796925 - Cib1 protein_coding retained_intron MGP_WSBEiJ_T0083265.1 MGP_WSBEiJ_G0031554.1 mouse_genomes_project 7 81792725 81797133 - MGP_WSBEiJ_P0083265 Cib1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083266.1 MGP_WSBEiJ_G0031554.1 mouse_genomes_project 7 81795778 81797059 - Cib1 protein_coding retained_intron MGP_WSBEiJ_T0083267.1 MGP_WSBEiJ_G0031554.1 mouse_genomes_project 7 81795893 81796909 - Cib1 protein_coding retained_intron MGP_WSBEiJ_T0097466.1 MGP_WSBEiJ_G0036135.1 mouse_genomes_project 7 149530932 149531393 - Gm14376 sense_intronic sense_intronic MGP_WSBEiJ_T0002250.1 MGP_WSBEiJ_G0002168.1 mouse_genomes_project 7 125929292 125931968 + TEC TEC MGP_WSBEiJ_T0083056.1 MGP_WSBEiJ_G0031513.1 mouse_genomes_project 7 69233674 69270788 - MGP_WSBEiJ_P0083056 Pgpep1l protein_coding protein_coding MGP_WSBEiJ_T0002242.1 MGP_WSBEiJ_G0002160.1 mouse_genomes_project 7 94995660 94995979 + TEC TEC MGP_WSBEiJ_T0084057.1 MGP_WSBEiJ_G0031745.1 mouse_genomes_project 7 104858319 104864284 - MGP_WSBEiJ_P0084057 Art5 protein_coding protein_coding MGP_WSBEiJ_T0084058.1 MGP_WSBEiJ_G0031745.1 mouse_genomes_project 7 104858320 104861674 - MGP_WSBEiJ_P0084058 Art5 protein_coding protein_coding MGP_WSBEiJ_T0084059.1 MGP_WSBEiJ_G0031745.1 mouse_genomes_project 7 104858551 104861384 - MGP_WSBEiJ_P0084059 Art5 protein_coding protein_coding MGP_WSBEiJ_T0084060.1 MGP_WSBEiJ_G0031745.1 mouse_genomes_project 7 104858551 104860938 - MGP_WSBEiJ_P0084060 Art5 protein_coding protein_coding MGP_WSBEiJ_T0083647.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 98632818 99384359 + MGP_WSBEiJ_P0083647 Tenm4 protein_coding protein_coding MGP_WSBEiJ_T0083648.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 98665628 98893489 + Tenm4 protein_coding retained_intron MGP_WSBEiJ_T0083649.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 98665678 98958242 + Tenm4 protein_coding processed_transcript MGP_WSBEiJ_T0083650.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 98666105 98895317 + Tenm4 protein_coding retained_intron MGP_WSBEiJ_T0083651.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 98666113 99017901 + MGP_WSBEiJ_P0083651 Tenm4 protein_coding protein_coding MGP_WSBEiJ_T0083652.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 98666596 99386883 + MGP_WSBEiJ_P0083652 Tenm4 protein_coding protein_coding MGP_WSBEiJ_T0083653.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 98667630 99384344 + MGP_WSBEiJ_P0083653 Tenm4 protein_coding protein_coding MGP_WSBEiJ_T0083654.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 98986896 99017901 + MGP_WSBEiJ_P0083654 Tenm4 protein_coding protein_coding MGP_WSBEiJ_T0083655.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 99111970 99202004 + Tenm4 protein_coding retained_intron MGP_WSBEiJ_T0083656.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 99250141 99269812 + MGP_WSBEiJ_P0083656 Tenm4 protein_coding protein_coding MGP_WSBEiJ_T0083657.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 99268719 99270649 + Tenm4 protein_coding processed_transcript MGP_WSBEiJ_T0083658.1 MGP_WSBEiJ_G0031661.1 mouse_genomes_project 7 99268719 99316525 + Tenm4 protein_coding retained_intron MGP_WSBEiJ_T0083428.1 MGP_WSBEiJ_G0031579.1 mouse_genomes_project 7 83124282 83129177 - Ap3b2 protein_coding retained_intron MGP_WSBEiJ_T0083429.1 MGP_WSBEiJ_G0031579.1 mouse_genomes_project 7 83124284 83160464 - MGP_WSBEiJ_P0083429 Ap3b2 protein_coding protein_coding MGP_WSBEiJ_T0083430.1 MGP_WSBEiJ_G0031579.1 mouse_genomes_project 7 83138269 83160245 - Ap3b2 protein_coding retained_intron MGP_WSBEiJ_T0083431.1 MGP_WSBEiJ_G0031579.1 mouse_genomes_project 7 83141024 83142312 - Ap3b2 protein_coding processed_transcript MGP_WSBEiJ_T0083432.1 MGP_WSBEiJ_G0031579.1 mouse_genomes_project 7 83143552 83160322 - MGP_WSBEiJ_P0083432 Ap3b2 protein_coding protein_coding MGP_WSBEiJ_T0084394.1 MGP_WSBEiJ_G0031934.1 mouse_genomes_project 7 110240016 110241120 + MGP_WSBEiJ_P0084394 Olfr716 protein_coding protein_coding MGP_WSBEiJ_T0081059.1 MGP_WSBEiJ_G0031027.1 mouse_genomes_project 7 24102536 24134680 - MGP_WSBEiJ_P0081059 Axl protein_coding protein_coding MGP_WSBEiJ_T0081060.1 MGP_WSBEiJ_G0031027.1 mouse_genomes_project 7 24102893 24134698 - MGP_WSBEiJ_P0081060 Axl protein_coding protein_coding MGP_WSBEiJ_T0081061.1 MGP_WSBEiJ_G0031027.1 mouse_genomes_project 7 24105959 24109334 - Axl protein_coding retained_intron MGP_WSBEiJ_T0081062.1 MGP_WSBEiJ_G0031027.1 mouse_genomes_project 7 24106650 24109683 - Axl protein_coding retained_intron MGP_WSBEiJ_T0081063.1 MGP_WSBEiJ_G0031027.1 mouse_genomes_project 7 24109063 24134693 - Axl protein_coding retained_intron MGP_WSBEiJ_T0081064.1 MGP_WSBEiJ_G0031027.1 mouse_genomes_project 7 24111840 24119978 - MGP_WSBEiJ_P0081064 Axl protein_coding protein_coding MGP_WSBEiJ_T0081065.1 MGP_WSBEiJ_G0031027.1 mouse_genomes_project 7 24124900 24133200 - Axl protein_coding retained_intron MGP_WSBEiJ_T0081066.1 MGP_WSBEiJ_G0031027.1 mouse_genomes_project 7 24132071 24133706 - Axl protein_coding retained_intron MGP_WSBEiJ_T0015407.1 MGP_WSBEiJ_G0013537.1 mouse_genomes_project 7 130787846 130788075 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084955.1 MGP_WSBEiJ_G0032095.1 mouse_genomes_project 7 126133879 126500868 + MGP_WSBEiJ_P0084955 Prkcb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084956.1 MGP_WSBEiJ_G0032095.1 mouse_genomes_project 7 126134425 126495141 + MGP_WSBEiJ_P0084956 Prkcb protein_coding protein_coding MGP_WSBEiJ_T0084957.1 MGP_WSBEiJ_G0032095.1 mouse_genomes_project 7 126134437 126500871 + MGP_WSBEiJ_P0084957 Prkcb protein_coding protein_coding MGP_WSBEiJ_T0084958.1 MGP_WSBEiJ_G0032095.1 mouse_genomes_project 7 126135156 126285629 + Prkcb protein_coding processed_transcript MGP_WSBEiJ_T0084959.1 MGP_WSBEiJ_G0032095.1 mouse_genomes_project 7 126276299 126317894 + Prkcb protein_coding processed_transcript MGP_WSBEiJ_T0084960.1 MGP_WSBEiJ_G0032095.1 mouse_genomes_project 7 126454637 126457421 + Prkcb protein_coding retained_intron MGP_WSBEiJ_T0084961.1 MGP_WSBEiJ_G0032095.1 mouse_genomes_project 7 126460655 126494564 + Prkcb protein_coding processed_transcript MGP_WSBEiJ_T0084962.1 MGP_WSBEiJ_G0032095.1 mouse_genomes_project 7 126499917 126500871 + Prkcb protein_coding retained_intron MGP_WSBEiJ_T0084415.1 MGP_WSBEiJ_G0031948.1 mouse_genomes_project 7 111218119 111219230 + MGP_WSBEiJ_P0084415 Olfr479 protein_coding protein_coding MGP_WSBEiJ_T0010719.1 MGP_WSBEiJ_G0008876.1 mouse_genomes_project 7 79445355 79445453 - Gm44358 miRNA miRNA MGP_WSBEiJ_T0015238.1 MGP_WSBEiJ_G0013368.1 mouse_genomes_project 7 15427532 15427999 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084167.1 MGP_WSBEiJ_G0031821.1 mouse_genomes_project 7 106670681 106672129 - MGP_WSBEiJ_P0084167 protein_coding protein_coding MGP_WSBEiJ_T0080227.1 MGP_WSBEiJ_G0030765.1 mouse_genomes_project 7 3606980 3608041 + MGP_WSBEiJ_P0080227 Olfr1344 protein_coding protein_coding MGP_WSBEiJ_T0083761.1 MGP_WSBEiJ_G0031683.1 mouse_genomes_project 7 100945520 100983407 + MGP_WSBEiJ_P0083761 Gucy2d protein_coding protein_coding MGP_WSBEiJ_T0083762.1 MGP_WSBEiJ_G0031683.1 mouse_genomes_project 7 100948541 100983406 + MGP_WSBEiJ_P0083762 Gucy2d protein_coding protein_coding MGP_WSBEiJ_T0083763.1 MGP_WSBEiJ_G0031683.1 mouse_genomes_project 7 100972772 100980246 + MGP_WSBEiJ_P0083763 Gucy2d protein_coding protein_coding MGP_WSBEiJ_T0083764.1 MGP_WSBEiJ_G0031683.1 mouse_genomes_project 7 100976593 100983406 + Gucy2d protein_coding processed_transcript MGP_WSBEiJ_T0005222.1 MGP_WSBEiJ_G0004428.1 mouse_genomes_project 7 132941323 132942421 - Gm44672 antisense antisense MGP_WSBEiJ_T0086548.1 MGP_WSBEiJ_G0032424.1 mouse_genomes_project 7 149910346 149914983 + MGP_WSBEiJ_P0086548 Fgf3 protein_coding protein_coding MGP_WSBEiJ_T0086549.1 MGP_WSBEiJ_G0032424.1 mouse_genomes_project 7 149910858 149916700 + MGP_WSBEiJ_P0086549 Fgf3 protein_coding protein_coding MGP_WSBEiJ_T0080251.1 MGP_WSBEiJ_G0030781.1 mouse_genomes_project 7 7667109 7668105 + MGP_WSBEiJ_P0080251 Vmn1r67 protein_coding protein_coding MGP_WSBEiJ_T0101109.1 MGP_WSBEiJ_G0039566.1 mouse_genomes_project 7 106825568 106826522 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008714.1 MGP_WSBEiJ_G0007046.1 mouse_genomes_project 7 40008979 40117587 - Gm28807 lincRNA lincRNA MGP_WSBEiJ_T0083522.1 MGP_WSBEiJ_G0031608.1 mouse_genomes_project 7 86671441 86674845 + MGP_WSBEiJ_P0083522 protein_coding protein_coding MGP_WSBEiJ_T0086499.1 MGP_WSBEiJ_G0032416.1 mouse_genomes_project 7 148826667 148855320 - MGP_WSBEiJ_P0086499 Nadsyn1 protein_coding protein_coding MGP_WSBEiJ_T0086500.1 MGP_WSBEiJ_G0032416.1 mouse_genomes_project 7 148826933 148855266 - MGP_WSBEiJ_P0086500 Nadsyn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086501.1 MGP_WSBEiJ_G0032416.1 mouse_genomes_project 7 148826952 148855321 - MGP_WSBEiJ_P0086501 Nadsyn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086502.1 MGP_WSBEiJ_G0032416.1 mouse_genomes_project 7 148828932 148829925 - Nadsyn1 protein_coding retained_intron MGP_WSBEiJ_T0086503.1 MGP_WSBEiJ_G0032416.1 mouse_genomes_project 7 148845241 148855297 - MGP_WSBEiJ_P0086503 Nadsyn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086504.1 MGP_WSBEiJ_G0032416.1 mouse_genomes_project 7 148845764 148855227 - Nadsyn1 protein_coding retained_intron MGP_WSBEiJ_T0086505.1 MGP_WSBEiJ_G0032416.1 mouse_genomes_project 7 148845902 148855284 - MGP_WSBEiJ_P0086505 Nadsyn1 protein_coding protein_coding MGP_WSBEiJ_T0086506.1 MGP_WSBEiJ_G0032416.1 mouse_genomes_project 7 148847816 148855328 - Nadsyn1 protein_coding retained_intron MGP_WSBEiJ_T0101104.1 MGP_WSBEiJ_G0039561.1 mouse_genomes_project 7 106449108 106459017 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083317.1 MGP_WSBEiJ_G0031562.1 mouse_genomes_project 7 81922083 81924310 + MGP_WSBEiJ_P0083317 Hddc3 protein_coding protein_coding MGP_WSBEiJ_T0083318.1 MGP_WSBEiJ_G0031562.1 mouse_genomes_project 7 81922095 81922959 + MGP_WSBEiJ_P0083318 Hddc3 protein_coding protein_coding MGP_WSBEiJ_T0083319.1 MGP_WSBEiJ_G0031562.1 mouse_genomes_project 7 81922545 81923361 + MGP_WSBEiJ_P0083319 Hddc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083320.1 MGP_WSBEiJ_G0031562.1 mouse_genomes_project 7 81922758 81928172 + MGP_WSBEiJ_P0083320 Hddc3 protein_coding protein_coding MGP_WSBEiJ_T0015314.1 MGP_WSBEiJ_G0013444.1 mouse_genomes_project 7 56789655 56790365 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002237.1 MGP_WSBEiJ_G0002155.1 mouse_genomes_project 7 81565079 81567169 + TEC TEC MGP_WSBEiJ_T0080272.1 MGP_WSBEiJ_G0030797.1 mouse_genomes_project 7 9589969 9590965 - MGP_WSBEiJ_P0080272 Vmn1r83 protein_coding protein_coding MGP_WSBEiJ_T0084099.1 MGP_WSBEiJ_G0031757.1 mouse_genomes_project 7 105339200 105340151 + MGP_WSBEiJ_P0084099 Olfr549 protein_coding protein_coding MGP_WSBEiJ_T0081627.1 MGP_WSBEiJ_G0031174.1 mouse_genomes_project 7 29387767 29392259 - MGP_WSBEiJ_P0081627 Lin37 protein_coding protein_coding MGP_WSBEiJ_T0081628.1 MGP_WSBEiJ_G0031174.1 mouse_genomes_project 7 29387770 29388348 - Lin37 protein_coding retained_intron MGP_WSBEiJ_T0081629.1 MGP_WSBEiJ_G0031174.1 mouse_genomes_project 7 29387771 29392451 - MGP_WSBEiJ_P0081629 Lin37 protein_coding protein_coding MGP_WSBEiJ_T0081630.1 MGP_WSBEiJ_G0031174.1 mouse_genomes_project 7 29388186 29392272 - MGP_WSBEiJ_P0081630 Lin37 protein_coding protein_coding MGP_WSBEiJ_T0081631.1 MGP_WSBEiJ_G0031174.1 mouse_genomes_project 7 29389705 29392252 - Lin37 protein_coding processed_transcript MGP_WSBEiJ_T0084407.1 MGP_WSBEiJ_G0031941.1 mouse_genomes_project 7 110869332 110879073 - MGP_WSBEiJ_P0084407 Cyb5r2 protein_coding protein_coding MGP_WSBEiJ_T0084408.1 MGP_WSBEiJ_G0031941.1 mouse_genomes_project 7 110871100 110878252 - MGP_WSBEiJ_P0084408 Cyb5r2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082359.1 MGP_WSBEiJ_G0031337.1 mouse_genomes_project 7 45174857 45179419 + MGP_WSBEiJ_P0082359 Fuz protein_coding protein_coding MGP_WSBEiJ_T0080392.1 MGP_WSBEiJ_G0030839.1 mouse_genomes_project 7 13396314 13403848 - MGP_WSBEiJ_P0080392 Obox6 protein_coding protein_coding MGP_WSBEiJ_T0002175.1 MGP_WSBEiJ_G0002094.1 mouse_genomes_project 7 39719524 39722828 - TEC TEC MGP_WSBEiJ_T0084243.1 MGP_WSBEiJ_G0031869.1 mouse_genomes_project 7 107749062 107750013 + MGP_WSBEiJ_P0084243 Olfr665 protein_coding protein_coding MGP_WSBEiJ_T0098500.1 MGP_WSBEiJ_G0037163.1 mouse_genomes_project 7 107146181 107146281 - Gm27995 snRNA snRNA MGP_WSBEiJ_T0083433.1 MGP_WSBEiJ_G0031580.1 mouse_genomes_project 7 83160813 83164819 - MGP_WSBEiJ_P0083433 BC048679 protein_coding protein_coding MGP_WSBEiJ_T0083434.1 MGP_WSBEiJ_G0031580.1 mouse_genomes_project 7 83160813 83164819 - MGP_WSBEiJ_P0083434 BC048679 protein_coding protein_coding MGP_WSBEiJ_T0084422.1 MGP_WSBEiJ_G0031955.1 mouse_genomes_project 7 111499488 111500421 + MGP_WSBEiJ_P0084422 Olfr491 protein_coding protein_coding MGP_WSBEiJ_T0017747.1 MGP_WSBEiJ_G0015086.1 mouse_genomes_project 7 44485623 44486068 + processed_transcript lincRNA MGP_WSBEiJ_T0017748.1 MGP_WSBEiJ_G0015086.1 mouse_genomes_project 7 44485706 44486065 + processed_transcript retained_intron MGP_WSBEiJ_T0017749.1 MGP_WSBEiJ_G0015086.1 mouse_genomes_project 7 44485737 44486066 + processed_transcript retained_intron MGP_WSBEiJ_T0080520.1 MGP_WSBEiJ_G0030871.1 mouse_genomes_project 7 14574014 14578430 + MGP_WSBEiJ_P0080520 Ptgir protein_coding protein_coding MGP_WSBEiJ_T0080521.1 MGP_WSBEiJ_G0030871.1 mouse_genomes_project 7 14574038 14578425 + MGP_WSBEiJ_P0080521 Ptgir protein_coding protein_coding MGP_WSBEiJ_T0086345.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147381772 147386808 + Syt8 protein_coding processed_transcript MGP_WSBEiJ_T0086346.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147381868 147385901 + Syt8 protein_coding processed_transcript MGP_WSBEiJ_T0086347.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147381899 147387329 + MGP_WSBEiJ_P0086347 Syt8 protein_coding protein_coding MGP_WSBEiJ_T0086348.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147381923 147387261 + Syt8 protein_coding retained_intron MGP_WSBEiJ_T0086349.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147381923 147387261 + MGP_WSBEiJ_P0086349 Syt8 protein_coding protein_coding MGP_WSBEiJ_T0086350.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147381923 147387261 + MGP_WSBEiJ_P0086350 Syt8 protein_coding protein_coding MGP_WSBEiJ_T0086351.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147383769 147387238 + MGP_WSBEiJ_P0086351 Syt8 protein_coding protein_coding MGP_WSBEiJ_T0086352.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147385064 147385475 + MGP_WSBEiJ_P0086352 Syt8 protein_coding protein_coding MGP_WSBEiJ_T0086353.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147385353 147386917 + Syt8 protein_coding retained_intron MGP_WSBEiJ_T0086354.1 MGP_WSBEiJ_G0032389.1 mouse_genomes_project 7 147385947 147387245 + Syt8 protein_coding retained_intron MGP_WSBEiJ_T0005062.1 MGP_WSBEiJ_G0004315.1 mouse_genomes_project 7 1051386 1063231 - D030047H15Rik antisense antisense MGP_WSBEiJ_T0081772.1 MGP_WSBEiJ_G0031202.1 mouse_genomes_project 7 29860650 29863171 + Fam187b protein_coding retained_intron MGP_WSBEiJ_T0081773.1 MGP_WSBEiJ_G0031202.1 mouse_genomes_project 7 29860664 29876427 + MGP_WSBEiJ_P0081773 Fam187b protein_coding protein_coding MGP_WSBEiJ_T0081774.1 MGP_WSBEiJ_G0031202.1 mouse_genomes_project 7 29863899 29876433 + MGP_WSBEiJ_P0081774 Fam187b protein_coding protein_coding MGP_WSBEiJ_T0081775.1 MGP_WSBEiJ_G0031202.1 mouse_genomes_project 7 29868722 29876169 + MGP_WSBEiJ_P0081775 Fam187b protein_coding protein_coding MGP_WSBEiJ_T0080865.1 MGP_WSBEiJ_G0030981.1 mouse_genomes_project 7 22678996 22686908 + MGP_WSBEiJ_P0080865 Irgq protein_coding protein_coding MGP_WSBEiJ_T0084934.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125941854 125967655 - MGP_WSBEiJ_P0084934 Palb2 protein_coding protein_coding MGP_WSBEiJ_T0084935.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125941854 125967720 - MGP_WSBEiJ_P0084935 Palb2 protein_coding protein_coding MGP_WSBEiJ_T0084936.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125941854 125967757 - MGP_WSBEiJ_P0084936 Palb2 protein_coding protein_coding MGP_WSBEiJ_T0084937.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125941857 125946573 - Palb2 protein_coding retained_intron MGP_WSBEiJ_T0084938.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125941859 125958271 - MGP_WSBEiJ_P0084938 Palb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084939.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125946104 125967728 - MGP_WSBEiJ_P0084939 Palb2 protein_coding protein_coding MGP_WSBEiJ_T0084940.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125946104 125967699 - MGP_WSBEiJ_P0084940 Palb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084941.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125959475 125967730 - Palb2 protein_coding retained_intron MGP_WSBEiJ_T0084942.1 MGP_WSBEiJ_G0032090.1 mouse_genomes_project 7 125965649 125967796 - Palb2 protein_coding retained_intron MGP_WSBEiJ_T0081212.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26133012 26170516 + MGP_WSBEiJ_P0081212 Akt2 protein_coding protein_coding MGP_WSBEiJ_T0081213.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26133102 26174358 + MGP_WSBEiJ_P0081213 Akt2 protein_coding protein_coding MGP_WSBEiJ_T0081214.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26134191 26157910 + Akt2 protein_coding processed_transcript MGP_WSBEiJ_T0081215.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26137474 26159801 + MGP_WSBEiJ_P0081215 Akt2 protein_coding protein_coding MGP_WSBEiJ_T0081216.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26146445 26170540 + MGP_WSBEiJ_P0081216 Akt2 protein_coding protein_coding MGP_WSBEiJ_T0081217.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26148383 26174338 + MGP_WSBEiJ_P0081217 Akt2 protein_coding protein_coding MGP_WSBEiJ_T0081218.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26148410 26182255 + MGP_WSBEiJ_P0081218 Akt2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081219.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26148639 26159854 + MGP_WSBEiJ_P0081219 Akt2 protein_coding protein_coding MGP_WSBEiJ_T0081220.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26149297 26179245 + MGP_WSBEiJ_P0081220 Akt2 protein_coding protein_coding MGP_WSBEiJ_T0081221.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26170195 26175691 + Akt2 protein_coding retained_intron MGP_WSBEiJ_T0081222.1 MGP_WSBEiJ_G0031067.1 mouse_genomes_project 7 26177102 26178494 + Akt2 protein_coding retained_intron MGP_WSBEiJ_T0097464.1 MGP_WSBEiJ_G0036133.1 mouse_genomes_project 7 128121925 128230521 + Gm15338 sense_intronic sense_intronic MGP_WSBEiJ_T0015308.1 MGP_WSBEiJ_G0013438.1 mouse_genomes_project 7 52209096 52209216 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082612.1 MGP_WSBEiJ_G0031409.1 mouse_genomes_project 7 46357318 46417502 - MGP_WSBEiJ_P0082612 Abcc6 protein_coding protein_coding MGP_WSBEiJ_T0082613.1 MGP_WSBEiJ_G0031409.1 mouse_genomes_project 7 46357834 46358624 - Abcc6 protein_coding retained_intron MGP_WSBEiJ_T0082614.1 MGP_WSBEiJ_G0031409.1 mouse_genomes_project 7 46379654 46384062 - Abcc6 protein_coding retained_intron MGP_WSBEiJ_T0098511.1 MGP_WSBEiJ_G0037174.1 mouse_genomes_project 7 126110358 126110465 + Gm23614 snRNA snRNA MGP_WSBEiJ_T0015320.1 MGP_WSBEiJ_G0013450.1 mouse_genomes_project 7 57895169 57896569 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097182.1 MGP_WSBEiJ_G0035863.1 mouse_genomes_project 7 3904675 3904769 + Gm27675 sRNA sRNA MGP_WSBEiJ_T0002267.1 MGP_WSBEiJ_G0002185.1 mouse_genomes_project 7 131770169 131771336 - TEC TEC MGP_WSBEiJ_T0002274.1 MGP_WSBEiJ_G0002192.1 mouse_genomes_project 7 138522240 138526729 - TEC TEC MGP_WSBEiJ_T0084163.1 MGP_WSBEiJ_G0031817.1 mouse_genomes_project 7 106590266 106591211 - MGP_WSBEiJ_P0084163 Olfr629 protein_coding protein_coding MGP_WSBEiJ_T0101008.1 MGP_WSBEiJ_G0039465.1 mouse_genomes_project 7 23158403 23158989 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084190.1 MGP_WSBEiJ_G0031844.1 mouse_genomes_project 7 107020089 107022387 - MGP_WSBEiJ_P0084190 Ubqlnl protein_coding protein_coding MGP_WSBEiJ_T0005120.1 MGP_WSBEiJ_G0004356.1 mouse_genomes_project 7 34396231 34396584 + Gm45095 antisense antisense MGP_WSBEiJ_T0081809.1 MGP_WSBEiJ_G0031206.1 mouse_genomes_project 7 29962949 29975408 + MGP_WSBEiJ_P0081809 Lgi4 protein_coding protein_coding MGP_WSBEiJ_T0081810.1 MGP_WSBEiJ_G0031206.1 mouse_genomes_project 7 29964192 29967296 + MGP_WSBEiJ_P0081810 Lgi4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081811.1 MGP_WSBEiJ_G0031206.1 mouse_genomes_project 7 29964230 29967702 + MGP_WSBEiJ_P0081811 Lgi4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081812.1 MGP_WSBEiJ_G0031206.1 mouse_genomes_project 7 29967176 29968224 + MGP_WSBEiJ_P0081812 Lgi4 protein_coding protein_coding MGP_WSBEiJ_T0082379.1 MGP_WSBEiJ_G0031346.1 mouse_genomes_project 7 45310954 45314589 + MGP_WSBEiJ_P0082379 Rras protein_coding protein_coding MGP_WSBEiJ_T0085545.1 MGP_WSBEiJ_G0032198.1 mouse_genomes_project 7 132005319 132007615 + Zfp646 protein_coding retained_intron MGP_WSBEiJ_T0085546.1 MGP_WSBEiJ_G0032198.1 mouse_genomes_project 7 132005894 132009287 + MGP_WSBEiJ_P0085546 Zfp646 protein_coding protein_coding MGP_WSBEiJ_T0085547.1 MGP_WSBEiJ_G0032198.1 mouse_genomes_project 7 132006799 132015095 + MGP_WSBEiJ_P0085547 Zfp646 protein_coding protein_coding MGP_WSBEiJ_T0085548.1 MGP_WSBEiJ_G0032198.1 mouse_genomes_project 7 132008409 132015091 + MGP_WSBEiJ_P0085548 Zfp646 protein_coding protein_coding MGP_WSBEiJ_T0101039.1 MGP_WSBEiJ_G0039496.1 mouse_genomes_project 7 44192362 44207181 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081155.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25817491 25851868 - MGP_WSBEiJ_P0081155 Ltbp4 protein_coding protein_coding MGP_WSBEiJ_T0081156.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25817495 25847845 - MGP_WSBEiJ_P0081156 Ltbp4 protein_coding protein_coding MGP_WSBEiJ_T0081157.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25817497 25851868 - MGP_WSBEiJ_P0081157 Ltbp4 protein_coding protein_coding MGP_WSBEiJ_T0081158.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25818353 25847795 - MGP_WSBEiJ_P0081158 Ltbp4 protein_coding protein_coding MGP_WSBEiJ_T0081159.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25818434 25819326 - Ltbp4 protein_coding retained_intron MGP_WSBEiJ_T0081160.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25818978 25824052 - MGP_WSBEiJ_P0081160 Ltbp4 protein_coding protein_coding MGP_WSBEiJ_T0081161.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25819915 25824071 - Ltbp4 protein_coding retained_intron MGP_WSBEiJ_T0081162.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25821332 25823855 - Ltbp4 protein_coding retained_intron MGP_WSBEiJ_T0081163.1 MGP_WSBEiJ_G0031055.1 mouse_genomes_project 7 25824952 25847830 - Ltbp4 protein_coding processed_transcript MGP_WSBEiJ_T0086041.1 MGP_WSBEiJ_G0032312.1 mouse_genomes_project 7 145039351 145040329 + MGP_WSBEiJ_P0086041 Olfr527 protein_coding protein_coding MGP_WSBEiJ_T0083909.1 MGP_WSBEiJ_G0031720.1 mouse_genomes_project 7 103440360 103504263 + MGP_WSBEiJ_P0083909 Fam168a protein_coding protein_coding MGP_WSBEiJ_T0082052.1 MGP_WSBEiJ_G0031253.1 mouse_genomes_project 7 39131360 39153658 + MGP_WSBEiJ_P0082052 Zfp619 protein_coding protein_coding MGP_WSBEiJ_T0082722.1 MGP_WSBEiJ_G0031446.1 mouse_genomes_project 7 49557175 49573399 - MGP_WSBEiJ_P0082722 E2f8 protein_coding protein_coding MGP_WSBEiJ_T0082723.1 MGP_WSBEiJ_G0031446.1 mouse_genomes_project 7 49557175 49572845 - MGP_WSBEiJ_P0082723 E2f8 protein_coding protein_coding MGP_WSBEiJ_T0082724.1 MGP_WSBEiJ_G0031446.1 mouse_genomes_project 7 49562847 49566976 - E2f8 protein_coding retained_intron MGP_WSBEiJ_T0082725.1 MGP_WSBEiJ_G0031446.1 mouse_genomes_project 7 49570624 49572808 - E2f8 protein_coding retained_intron MGP_WSBEiJ_T0085492.1 MGP_WSBEiJ_G0032188.1 mouse_genomes_project 7 131832858 131838315 + MGP_WSBEiJ_P0085492 Ctf1 protein_coding protein_coding MGP_WSBEiJ_T0085493.1 MGP_WSBEiJ_G0032188.1 mouse_genomes_project 7 131833059 131837453 + MGP_WSBEiJ_P0085493 Ctf1 protein_coding protein_coding MGP_WSBEiJ_T0085494.1 MGP_WSBEiJ_G0032188.1 mouse_genomes_project 7 131833066 131837713 + MGP_WSBEiJ_P0085494 Ctf1 protein_coding protein_coding MGP_WSBEiJ_T0085495.1 MGP_WSBEiJ_G0032188.1 mouse_genomes_project 7 131833422 131837149 + Ctf1 protein_coding processed_transcript MGP_WSBEiJ_T0085496.1 MGP_WSBEiJ_G0032188.1 mouse_genomes_project 7 131833679 131837162 + Ctf1 protein_coding processed_transcript MGP_WSBEiJ_T0010682.1 MGP_WSBEiJ_G0008839.1 mouse_genomes_project 7 34426324 34426394 + Gm25033 miRNA miRNA MGP_WSBEiJ_T0015211.1 MGP_WSBEiJ_G0013341.1 mouse_genomes_project 7 1528892 1529493 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083366.1 MGP_WSBEiJ_G0031568.1 mouse_genomes_project 7 82317489 82419735 - MGP_WSBEiJ_P0083366 Iqgap1 protein_coding protein_coding MGP_WSBEiJ_T0083367.1 MGP_WSBEiJ_G0031568.1 mouse_genomes_project 7 82333235 82336700 - MGP_WSBEiJ_P0083367 Iqgap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083368.1 MGP_WSBEiJ_G0031568.1 mouse_genomes_project 7 82348778 82351581 - Iqgap1 protein_coding retained_intron MGP_WSBEiJ_T0083369.1 MGP_WSBEiJ_G0031568.1 mouse_genomes_project 7 82357080 82419582 - Iqgap1 protein_coding retained_intron MGP_WSBEiJ_T0083370.1 MGP_WSBEiJ_G0031568.1 mouse_genomes_project 7 82364568 82419600 - Iqgap1 protein_coding retained_intron MGP_WSBEiJ_T0083371.1 MGP_WSBEiJ_G0031568.1 mouse_genomes_project 7 82372887 82436397 - MGP_WSBEiJ_P0083371 Iqgap1 protein_coding protein_coding MGP_WSBEiJ_T0083372.1 MGP_WSBEiJ_G0031568.1 mouse_genomes_project 7 82378729 82447962 - MGP_WSBEiJ_P0083372 Iqgap1 protein_coding protein_coding MGP_WSBEiJ_T0083373.1 MGP_WSBEiJ_G0031568.1 mouse_genomes_project 7 82412005 82419591 - Iqgap1 protein_coding retained_intron MGP_WSBEiJ_T0081369.1 MGP_WSBEiJ_G0031112.1 mouse_genomes_project 7 27528249 27536735 + MGP_WSBEiJ_P0081369 Lgals4 protein_coding protein_coding MGP_WSBEiJ_T0081370.1 MGP_WSBEiJ_G0031112.1 mouse_genomes_project 7 27528551 27530284 + Lgals4 protein_coding retained_intron MGP_WSBEiJ_T0081371.1 MGP_WSBEiJ_G0031112.1 mouse_genomes_project 7 27528582 27532490 + Lgals4 protein_coding retained_intron MGP_WSBEiJ_T0081372.1 MGP_WSBEiJ_G0031112.1 mouse_genomes_project 7 27528918 27536390 + MGP_WSBEiJ_P0081372 Lgals4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081373.1 MGP_WSBEiJ_G0031112.1 mouse_genomes_project 7 27530366 27536728 + Lgals4 protein_coding retained_intron MGP_WSBEiJ_T0081374.1 MGP_WSBEiJ_G0031112.1 mouse_genomes_project 7 27536181 27536730 + Lgals4 protein_coding retained_intron MGP_WSBEiJ_T0002168.1 MGP_WSBEiJ_G0002087.1 mouse_genomes_project 7 36206537 36208079 + TEC TEC MGP_WSBEiJ_T0079884.1 MGP_WSBEiJ_G0030680.1 mouse_genomes_project 7 97832 136769 - MGP_WSBEiJ_P0079884 Nlrp12 protein_coding protein_coding MGP_WSBEiJ_T0079885.1 MGP_WSBEiJ_G0030680.1 mouse_genomes_project 7 121206 136896 - Nlrp12 protein_coding retained_intron MGP_WSBEiJ_T0082189.1 MGP_WSBEiJ_G0031304.1 mouse_genomes_project 7 44189954 44192005 + MGP_WSBEiJ_P0082189 protein_coding protein_coding MGP_WSBEiJ_T0011485.1 MGP_WSBEiJ_G0009642.1 mouse_genomes_project 7 74897972 74898193 + Gm23020 misc_RNA misc_RNA MGP_WSBEiJ_T0084863.1 MGP_WSBEiJ_G0032070.1 mouse_genomes_project 7 124431305 124443127 - MGP_WSBEiJ_P0084863 Pdzd9 protein_coding protein_coding MGP_WSBEiJ_T0084864.1 MGP_WSBEiJ_G0032070.1 mouse_genomes_project 7 124431363 124443034 - Pdzd9 protein_coding processed_transcript MGP_WSBEiJ_T0005085.1 MGP_WSBEiJ_G0004329.1 mouse_genomes_project 7 22025147 22168382 - antisense antisense MGP_WSBEiJ_T0083548.1 MGP_WSBEiJ_G0031631.1 mouse_genomes_project 7 88953027 89128738 + MGP_WSBEiJ_P0083548 protein_coding protein_coding MGP_WSBEiJ_T0010686.1 MGP_WSBEiJ_G0008843.1 mouse_genomes_project 7 45128188 45128261 + Mir707 miRNA miRNA MGP_WSBEiJ_T0005086.1 MGP_WSBEiJ_G0004330.1 mouse_genomes_project 7 22212910 22217050 - Gm44793 antisense antisense MGP_WSBEiJ_T0082552.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46079036 46086634 + MGP_WSBEiJ_P0082552 protein_coding protein_coding MGP_WSBEiJ_T0082553.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46081649 46086635 + MGP_WSBEiJ_P0082553 protein_coding protein_coding MGP_WSBEiJ_T0082554.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46081735 46086628 + MGP_WSBEiJ_P0082554 protein_coding protein_coding MGP_WSBEiJ_T0082555.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46082730 46084498 + protein_coding retained_intron MGP_WSBEiJ_T0082556.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46082787 46084730 + MGP_WSBEiJ_P0082556 protein_coding protein_coding MGP_WSBEiJ_T0082557.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46082840 46086585 + protein_coding retained_intron MGP_WSBEiJ_T0082558.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46083968 46086627 + MGP_WSBEiJ_P0082558 protein_coding protein_coding MGP_WSBEiJ_T0082559.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46083993 46086630 + MGP_WSBEiJ_P0082559 protein_coding protein_coding MGP_WSBEiJ_T0082560.1 MGP_WSBEiJ_G0031395.1 mouse_genomes_project 7 46084527 46086630 + protein_coding retained_intron MGP_WSBEiJ_T0081835.1 MGP_WSBEiJ_G0031209.1 mouse_genomes_project 7 30022652 30034129 - MGP_WSBEiJ_P0081835 Scn1b protein_coding protein_coding MGP_WSBEiJ_T0084308.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108528004 108534209 - MGP_WSBEiJ_P0084308 Arfip2 protein_coding protein_coding MGP_WSBEiJ_T0084309.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108528009 108533707 - Arfip2 protein_coding retained_intron MGP_WSBEiJ_T0084310.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108529423 108534107 - MGP_WSBEiJ_P0084310 Arfip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084311.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108529426 108531698 - Arfip2 protein_coding processed_transcript MGP_WSBEiJ_T0084312.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108529458 108534130 - MGP_WSBEiJ_P0084312 Arfip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084313.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108529459 108534144 - MGP_WSBEiJ_P0084313 Arfip2 protein_coding protein_coding MGP_WSBEiJ_T0084314.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108530697 108531841 - Arfip2 protein_coding processed_transcript MGP_WSBEiJ_T0084315.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108530915 108531711 - Arfip2 protein_coding processed_transcript MGP_WSBEiJ_T0084316.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108530983 108534101 - MGP_WSBEiJ_P0084316 Arfip2 protein_coding protein_coding MGP_WSBEiJ_T0084317.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108531643 108534128 - MGP_WSBEiJ_P0084317 Arfip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084318.1 MGP_WSBEiJ_G0031900.1 mouse_genomes_project 7 108532380 108534133 - Arfip2 protein_coding retained_intron MGP_WSBEiJ_T0010688.1 MGP_WSBEiJ_G0008845.1 mouse_genomes_project 7 45430625 45430690 + Mir150 miRNA miRNA MGP_WSBEiJ_T0011484.1 MGP_WSBEiJ_G0009641.1 mouse_genomes_project 7 44462080 44462368 + Gm25386 misc_RNA misc_RNA MGP_WSBEiJ_T0008770.1 MGP_WSBEiJ_G0007089.1 mouse_genomes_project 7 74396773 74434542 - Gm30075 lincRNA lincRNA MGP_WSBEiJ_T0005183.1 MGP_WSBEiJ_G0004400.1 mouse_genomes_project 7 102244256 102251300 + Gm15635 antisense antisense MGP_WSBEiJ_T0005184.1 MGP_WSBEiJ_G0004400.1 mouse_genomes_project 7 102247920 102251211 + Gm15635 antisense antisense MGP_WSBEiJ_T0005185.1 MGP_WSBEiJ_G0004400.1 mouse_genomes_project 7 102247972 102251673 + Gm15635 antisense antisense MGP_WSBEiJ_T0084095.1 MGP_WSBEiJ_G0031753.1 mouse_genomes_project 7 105256950 105258080 - MGP_WSBEiJ_P0084095 Olfr543 protein_coding protein_coding MGP_WSBEiJ_T0080273.1 MGP_WSBEiJ_G0030798.1 mouse_genomes_project 7 9621509 9622466 - MGP_WSBEiJ_P0080273 Vmn1r84 protein_coding protein_coding MGP_WSBEiJ_T0082357.1 MGP_WSBEiJ_G0031335.1 mouse_genomes_project 7 45141415 45148144 - MGP_WSBEiJ_P0082357 Ptov1 protein_coding protein_coding MGP_WSBEiJ_T0008832.1 MGP_WSBEiJ_G0007128.1 mouse_genomes_project 7 103091754 103120670 - Gm10603 lincRNA lincRNA MGP_WSBEiJ_T0008833.1 MGP_WSBEiJ_G0007128.1 mouse_genomes_project 7 103105284 103113056 - Gm10603 lincRNA lincRNA MGP_WSBEiJ_T0008834.1 MGP_WSBEiJ_G0007128.1 mouse_genomes_project 7 103109439 103120675 - Gm10603 lincRNA lincRNA MGP_WSBEiJ_T0079901.1 MGP_WSBEiJ_G0030685.1 mouse_genomes_project 7 333577 344869 + MGP_WSBEiJ_P0079901 Cacng6 protein_coding protein_coding MGP_WSBEiJ_T0079902.1 MGP_WSBEiJ_G0030685.1 mouse_genomes_project 7 334044 344365 + MGP_WSBEiJ_P0079902 Cacng6 protein_coding protein_coding MGP_WSBEiJ_T0084905.1 MGP_WSBEiJ_G0032084.1 mouse_genomes_project 7 125689702 125746674 + MGP_WSBEiJ_P0084905 Scnn1b protein_coding protein_coding MGP_WSBEiJ_T0084906.1 MGP_WSBEiJ_G0032084.1 mouse_genomes_project 7 125689741 125746676 + MGP_WSBEiJ_P0084906 Scnn1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084909.1 MGP_WSBEiJ_G0032084.1 mouse_genomes_project 7 125727248 125740110 + MGP_WSBEiJ_P0084909 Scnn1b protein_coding protein_coding MGP_WSBEiJ_T0082064.1 MGP_WSBEiJ_G0031259.1 mouse_genomes_project 7 41305730 41335553 - MGP_WSBEiJ_P0082064 Gm6871 protein_coding protein_coding MGP_WSBEiJ_T0082065.1 MGP_WSBEiJ_G0031259.1 mouse_genomes_project 7 41305730 41322298 - MGP_WSBEiJ_P0082065 Gm6871 protein_coding protein_coding MGP_WSBEiJ_T0082066.1 MGP_WSBEiJ_G0031259.1 mouse_genomes_project 7 41323569 41335553 - MGP_WSBEiJ_P0082066 Gm6871 protein_coding protein_coding MGP_WSBEiJ_T0015285.1 MGP_WSBEiJ_G0013415.1 mouse_genomes_project 7 41459184 41462835 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002222.1 MGP_WSBEiJ_G0002140.1 mouse_genomes_project 7 77983848 77984799 + TEC TEC MGP_WSBEiJ_T0084574.1 MGP_WSBEiJ_G0032006.1 mouse_genomes_project 7 115494343 115538830 - MGP_WSBEiJ_P0084574 Dkk3 protein_coding protein_coding MGP_WSBEiJ_T0084193.1 MGP_WSBEiJ_G0031846.1 mouse_genomes_project 7 107053711 107054662 - MGP_WSBEiJ_P0084193 Olfr648 protein_coding protein_coding MGP_WSBEiJ_T0082995.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67641276 67663351 + MGP_WSBEiJ_P0082995 Lins1 protein_coding protein_coding MGP_WSBEiJ_T0082996.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67641281 67669650 + MGP_WSBEiJ_P0082996 Lins1 protein_coding protein_coding MGP_WSBEiJ_T0082997.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67641287 67663215 + MGP_WSBEiJ_P0082997 Lins1 protein_coding protein_coding MGP_WSBEiJ_T0082998.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67641336 67664896 + Lins1 protein_coding retained_intron MGP_WSBEiJ_T0082999.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67641345 67672161 + MGP_WSBEiJ_P0082999 Lins1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083000.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67641345 67669647 + MGP_WSBEiJ_P0083000 Lins1 protein_coding protein_coding MGP_WSBEiJ_T0083001.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67641358 67669650 + MGP_WSBEiJ_P0083001 Lins1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083002.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67663023 67669590 + MGP_WSBEiJ_P0083002 Lins1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083003.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67663171 67665369 + MGP_WSBEiJ_P0083003 Lins1 protein_coding protein_coding MGP_WSBEiJ_T0083004.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67663316 67665558 + MGP_WSBEiJ_P0083004 Lins1 protein_coding protein_coding MGP_WSBEiJ_T0083005.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67664402 67668753 + MGP_WSBEiJ_P0083005 Lins1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083006.1 MGP_WSBEiJ_G0031504.1 mouse_genomes_project 7 67665139 67672159 + Lins1 protein_coding retained_intron MGP_WSBEiJ_T0085466.1 MGP_WSBEiJ_G0032184.1 mouse_genomes_project 7 131702334 131708552 - MGP_WSBEiJ_P0085466 Ccdc189 protein_coding protein_coding MGP_WSBEiJ_T0085467.1 MGP_WSBEiJ_G0032184.1 mouse_genomes_project 7 131703311 131706292 - MGP_WSBEiJ_P0085467 Ccdc189 protein_coding protein_coding MGP_WSBEiJ_T0085468.1 MGP_WSBEiJ_G0032184.1 mouse_genomes_project 7 131703338 131705674 - Ccdc189 protein_coding retained_intron MGP_WSBEiJ_T0085469.1 MGP_WSBEiJ_G0032184.1 mouse_genomes_project 7 131705164 131708126 - Ccdc189 protein_coding retained_intron MGP_WSBEiJ_T0085470.1 MGP_WSBEiJ_G0032184.1 mouse_genomes_project 7 131707018 131708337 - Ccdc189 protein_coding retained_intron MGP_WSBEiJ_T0002157.1 MGP_WSBEiJ_G0002076.1 mouse_genomes_project 7 22824057 22824295 + TEC TEC MGP_WSBEiJ_T0010730.1 MGP_WSBEiJ_G0008887.1 mouse_genomes_project 7 104627422 104627518 + Gm22655 miRNA miRNA MGP_WSBEiJ_T0085359.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131259340 131263485 - MGP_WSBEiJ_P0085359 Cd2bp2 protein_coding protein_coding MGP_WSBEiJ_T0085360.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131259676 131263423 - MGP_WSBEiJ_P0085360 Cd2bp2 protein_coding protein_coding MGP_WSBEiJ_T0085361.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131259703 131263434 - Cd2bp2 protein_coding retained_intron MGP_WSBEiJ_T0085362.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131259705 131263472 - MGP_WSBEiJ_P0085362 Cd2bp2 protein_coding protein_coding MGP_WSBEiJ_T0085363.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131261339 131263360 - MGP_WSBEiJ_P0085363 Cd2bp2 protein_coding protein_coding MGP_WSBEiJ_T0085364.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131261945 131262929 - MGP_WSBEiJ_P0085364 Cd2bp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085365.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131262010 131263427 - MGP_WSBEiJ_P0085365 Cd2bp2 protein_coding protein_coding MGP_WSBEiJ_T0085366.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131262105 131263451 - MGP_WSBEiJ_P0085366 Cd2bp2 protein_coding protein_coding MGP_WSBEiJ_T0085367.1 MGP_WSBEiJ_G0032162.1 mouse_genomes_project 7 131262575 131263535 - MGP_WSBEiJ_P0085367 Cd2bp2 protein_coding protein_coding MGP_WSBEiJ_T0101112.1 MGP_WSBEiJ_G0039569.1 mouse_genomes_project 7 106862786 106863248 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079938.1 MGP_WSBEiJ_G0030693.1 mouse_genomes_project 7 540775 552272 - MGP_WSBEiJ_P0079938 Tmc4 protein_coding protein_coding MGP_WSBEiJ_T0079939.1 MGP_WSBEiJ_G0030693.1 mouse_genomes_project 7 540783 541876 - MGP_WSBEiJ_P0079939 Tmc4 protein_coding protein_coding MGP_WSBEiJ_T0079940.1 MGP_WSBEiJ_G0030693.1 mouse_genomes_project 7 540950 545447 - Tmc4 protein_coding retained_intron MGP_WSBEiJ_T0079941.1 MGP_WSBEiJ_G0030693.1 mouse_genomes_project 7 545541 551421 - Tmc4 protein_coding retained_intron MGP_WSBEiJ_T0079942.1 MGP_WSBEiJ_G0030693.1 mouse_genomes_project 7 545655 552318 - Tmc4 protein_coding retained_intron MGP_WSBEiJ_T0079943.1 MGP_WSBEiJ_G0030693.1 mouse_genomes_project 7 549963 552278 - Tmc4 protein_coding retained_intron MGP_WSBEiJ_T0082620.1 MGP_WSBEiJ_G0031411.1 mouse_genomes_project 7 46489396 46490569 - MGP_WSBEiJ_P0082620 Kcnj11 protein_coding protein_coding MGP_WSBEiJ_T0101091.1 MGP_WSBEiJ_G0039548.1 mouse_genomes_project 7 88448932 88449560 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008828.1 MGP_WSBEiJ_G0007125.1 mouse_genomes_project 7 101809036 101815378 - Gm26705 lincRNA lincRNA MGP_WSBEiJ_T0015209.1 MGP_WSBEiJ_G0013339.1 mouse_genomes_project 7 1320133 1320797 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010752.1 MGP_WSBEiJ_G0008909.1 mouse_genomes_project 7 146491496 146491587 + Mir7063 miRNA miRNA MGP_WSBEiJ_T0010747.1 MGP_WSBEiJ_G0008904.1 mouse_genomes_project 7 144460047 144460156 + Mir6401 miRNA miRNA MGP_WSBEiJ_T0083213.1 MGP_WSBEiJ_G0031541.1 mouse_genomes_project 7 81158180 81196803 + MGP_WSBEiJ_P0083213 Ticrr protein_coding protein_coding MGP_WSBEiJ_T0083214.1 MGP_WSBEiJ_G0031541.1 mouse_genomes_project 7 81158206 81159658 + Ticrr protein_coding retained_intron MGP_WSBEiJ_T0083215.1 MGP_WSBEiJ_G0031541.1 mouse_genomes_project 7 81158215 81196789 + MGP_WSBEiJ_P0083215 Ticrr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083216.1 MGP_WSBEiJ_G0031541.1 mouse_genomes_project 7 81158229 81182478 + MGP_WSBEiJ_P0083216 Ticrr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083217.1 MGP_WSBEiJ_G0031541.1 mouse_genomes_project 7 81158231 81192588 + MGP_WSBEiJ_P0083217 Ticrr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083218.1 MGP_WSBEiJ_G0031541.1 mouse_genomes_project 7 81167534 81173704 + Ticrr protein_coding processed_transcript MGP_WSBEiJ_T0083219.1 MGP_WSBEiJ_G0031541.1 mouse_genomes_project 7 81168918 81173704 + Ticrr protein_coding retained_intron MGP_WSBEiJ_T0098505.1 MGP_WSBEiJ_G0037168.1 mouse_genomes_project 7 113294748 113294889 + Gm23100 snRNA snRNA MGP_WSBEiJ_T0101030.1 MGP_WSBEiJ_G0039487.1 mouse_genomes_project 7 40676256 40964758 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0086539.1 MGP_WSBEiJ_G0032422.1 mouse_genomes_project 7 149644048 149649249 - MGP_WSBEiJ_P0086539 Fadd protein_coding protein_coding MGP_WSBEiJ_T0008764.1 MGP_WSBEiJ_G0007084.1 mouse_genomes_project 7 74277322 74280516 + Gm44725 lincRNA lincRNA MGP_WSBEiJ_T0084635.1 MGP_WSBEiJ_G0032022.1 mouse_genomes_project 7 118015481 118028264 - MGP_WSBEiJ_P0084635 Cyp2r1 protein_coding protein_coding MGP_WSBEiJ_T0084636.1 MGP_WSBEiJ_G0032022.1 mouse_genomes_project 7 118015537 118028262 - MGP_WSBEiJ_P0084636 Cyp2r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084637.1 MGP_WSBEiJ_G0032022.1 mouse_genomes_project 7 118015548 118028254 - MGP_WSBEiJ_P0084637 Cyp2r1 protein_coding protein_coding MGP_WSBEiJ_T0084638.1 MGP_WSBEiJ_G0032022.1 mouse_genomes_project 7 118015562 118020049 - Cyp2r1 protein_coding processed_transcript MGP_WSBEiJ_T0084639.1 MGP_WSBEiJ_G0032022.1 mouse_genomes_project 7 118015562 118020045 - MGP_WSBEiJ_P0084639 Cyp2r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084640.1 MGP_WSBEiJ_G0032022.1 mouse_genomes_project 7 118015564 118028254 - MGP_WSBEiJ_P0084640 Cyp2r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098504.1 MGP_WSBEiJ_G0037167.1 mouse_genomes_project 7 113276328 113276382 + Gm24842 snRNA snRNA MGP_WSBEiJ_T0098485.1 MGP_WSBEiJ_G0037148.1 mouse_genomes_project 7 64440634 64440735 + Gm22228 snRNA snRNA MGP_WSBEiJ_T0100994.1 MGP_WSBEiJ_G0039451.1 mouse_genomes_project 7 12191628 12191922 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080828.1 MGP_WSBEiJ_G0030972.1 mouse_genomes_project 7 22425876 22442498 - MGP_WSBEiJ_P0080828 Zfp94 protein_coding protein_coding MGP_WSBEiJ_T0080829.1 MGP_WSBEiJ_G0030972.1 mouse_genomes_project 7 22425969 22442559 - MGP_WSBEiJ_P0080829 Zfp94 protein_coding protein_coding MGP_WSBEiJ_T0080830.1 MGP_WSBEiJ_G0030972.1 mouse_genomes_project 7 22427800 22433561 - Zfp94 protein_coding retained_intron MGP_WSBEiJ_T0080831.1 MGP_WSBEiJ_G0030972.1 mouse_genomes_project 7 22432745 22442517 - Zfp94 protein_coding processed_transcript MGP_WSBEiJ_T0080832.1 MGP_WSBEiJ_G0030972.1 mouse_genomes_project 7 22433035 22442501 - Zfp94 protein_coding retained_intron MGP_WSBEiJ_T0080833.1 MGP_WSBEiJ_G0030972.1 mouse_genomes_project 7 22433148 22442475 - Zfp94 protein_coding processed_transcript MGP_WSBEiJ_T0008789.1 MGP_WSBEiJ_G0007104.1 mouse_genomes_project 7 80989441 81024311 + Mir9-3hg lincRNA lincRNA MGP_WSBEiJ_T0008790.1 MGP_WSBEiJ_G0007104.1 mouse_genomes_project 7 80989453 81024516 + Mir9-3hg lincRNA lincRNA MGP_WSBEiJ_T0008791.1 MGP_WSBEiJ_G0007104.1 mouse_genomes_project 7 80989532 81027410 + Mir9-3hg lincRNA lincRNA MGP_WSBEiJ_T0008792.1 MGP_WSBEiJ_G0007104.1 mouse_genomes_project 7 80989536 81024401 + Mir9-3hg lincRNA lincRNA MGP_WSBEiJ_T0008793.1 MGP_WSBEiJ_G0007104.1 mouse_genomes_project 7 81005896 81025599 + Mir9-3hg lincRNA lincRNA MGP_WSBEiJ_T0008794.1 MGP_WSBEiJ_G0007104.1 mouse_genomes_project 7 81006099 81024267 + Mir9-3hg lincRNA lincRNA MGP_WSBEiJ_T0008795.1 MGP_WSBEiJ_G0007104.1 mouse_genomes_project 7 81019582 81025052 + Mir9-3hg lincRNA lincRNA MGP_WSBEiJ_T0084161.1 MGP_WSBEiJ_G0031815.1 mouse_genomes_project 7 106549932 106550883 + MGP_WSBEiJ_P0084161 protein_coding protein_coding MGP_WSBEiJ_T0084388.1 MGP_WSBEiJ_G0031928.1 mouse_genomes_project 7 110083477 110085247 - MGP_WSBEiJ_P0084388 Olfr2 protein_coding protein_coding MGP_WSBEiJ_T0101045.1 MGP_WSBEiJ_G0039502.1 mouse_genomes_project 7 44409568 44454890 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098524.1 MGP_WSBEiJ_G0037187.1 mouse_genomes_project 7 146015761 146015857 - Gm22019 snRNA snRNA MGP_WSBEiJ_T0080384.1 MGP_WSBEiJ_G0030834.1 mouse_genomes_project 7 11736241 11739206 - MGP_WSBEiJ_P0080384 Obox8 protein_coding protein_coding MGP_WSBEiJ_T0085801.1 MGP_WSBEiJ_G0032250.1 mouse_genomes_project 7 136924244 136945197 - MGP_WSBEiJ_P0085801 Oat protein_coding protein_coding MGP_WSBEiJ_T0081728.1 MGP_WSBEiJ_G0031193.1 mouse_genomes_project 7 29684785 29691078 - MGP_WSBEiJ_P0081728 Ffar2 protein_coding protein_coding MGP_WSBEiJ_T0081729.1 MGP_WSBEiJ_G0031193.1 mouse_genomes_project 7 29684794 29687563 - MGP_WSBEiJ_P0081729 Ffar2 protein_coding protein_coding MGP_WSBEiJ_T0081730.1 MGP_WSBEiJ_G0031193.1 mouse_genomes_project 7 29685538 29688984 - MGP_WSBEiJ_P0081730 Ffar2 protein_coding protein_coding MGP_WSBEiJ_T0081731.1 MGP_WSBEiJ_G0031193.1 mouse_genomes_project 7 29685990 29687562 - MGP_WSBEiJ_P0081731 Ffar2 protein_coding protein_coding MGP_WSBEiJ_T0081732.1 MGP_WSBEiJ_G0031193.1 mouse_genomes_project 7 29686108 29687401 - MGP_WSBEiJ_P0081732 Ffar2 protein_coding protein_coding MGP_WSBEiJ_T0081733.1 MGP_WSBEiJ_G0031193.1 mouse_genomes_project 7 29686135 29687571 - MGP_WSBEiJ_P0081733 Ffar2 protein_coding protein_coding MGP_WSBEiJ_T0084730.1 MGP_WSBEiJ_G0032035.1 mouse_genomes_project 7 121770911 121895327 - MGP_WSBEiJ_P0084730 Smg1 protein_coding protein_coding MGP_WSBEiJ_T0084731.1 MGP_WSBEiJ_G0032035.1 mouse_genomes_project 7 121773684 121863209 - MGP_WSBEiJ_P0084731 Smg1 protein_coding protein_coding MGP_WSBEiJ_T0084732.1 MGP_WSBEiJ_G0032035.1 mouse_genomes_project 7 121780049 121781064 - MGP_WSBEiJ_P0084732 Smg1 protein_coding protein_coding MGP_WSBEiJ_T0084733.1 MGP_WSBEiJ_G0032035.1 mouse_genomes_project 7 121838373 121895327 - Smg1 protein_coding retained_intron MGP_WSBEiJ_T0084734.1 MGP_WSBEiJ_G0032035.1 mouse_genomes_project 7 121844205 121895317 - MGP_WSBEiJ_P0084734 Smg1 protein_coding protein_coding MGP_WSBEiJ_T0084735.1 MGP_WSBEiJ_G0032035.1 mouse_genomes_project 7 121848112 121895039 - Smg1 protein_coding retained_intron MGP_WSBEiJ_T0005133.1 MGP_WSBEiJ_G0004365.1 mouse_genomes_project 7 44739387 44741924 + Gm44646 antisense antisense MGP_WSBEiJ_T0081290.1 MGP_WSBEiJ_G0031092.1 mouse_genomes_project 7 27000284 27008015 - MGP_WSBEiJ_P0081290 Med29 protein_coding protein_coding MGP_WSBEiJ_T0084891.1 MGP_WSBEiJ_G0032077.1 mouse_genomes_project 7 124831798 124834768 - MGP_WSBEiJ_P0084891 protein_coding protein_coding MGP_WSBEiJ_T0084155.1 MGP_WSBEiJ_G0031809.1 mouse_genomes_project 7 106426209 106427172 + MGP_WSBEiJ_P0084155 Olfr619 protein_coding protein_coding MGP_WSBEiJ_T0008654.1 MGP_WSBEiJ_G0006996.1 mouse_genomes_project 7 331047 332828 - 3300002P13Rik lincRNA lincRNA MGP_WSBEiJ_T0015248.1 MGP_WSBEiJ_G0013378.1 mouse_genomes_project 7 22916973 22917379 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008690.1 MGP_WSBEiJ_G0007028.1 mouse_genomes_project 7 34397468 34408131 - Gm45096 lincRNA lincRNA MGP_WSBEiJ_T0085105.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130487894 130495979 - MGP_WSBEiJ_P0085105 Sh2b1 protein_coding protein_coding MGP_WSBEiJ_T0085106.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130487896 130495992 - MGP_WSBEiJ_P0085106 Sh2b1 protein_coding protein_coding MGP_WSBEiJ_T0085107.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130487897 130496019 - MGP_WSBEiJ_P0085107 Sh2b1 protein_coding protein_coding MGP_WSBEiJ_T0085108.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130487899 130493957 - MGP_WSBEiJ_P0085108 Sh2b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085109.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130487899 130495713 - MGP_WSBEiJ_P0085109 Sh2b1 protein_coding protein_coding MGP_WSBEiJ_T0085110.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130487899 130495711 - MGP_WSBEiJ_P0085110 Sh2b1 protein_coding protein_coding MGP_WSBEiJ_T0085111.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130487905 130495939 - MGP_WSBEiJ_P0085111 Sh2b1 protein_coding protein_coding MGP_WSBEiJ_T0085112.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130489799 130491095 - Sh2b1 protein_coding processed_transcript MGP_WSBEiJ_T0085113.1 MGP_WSBEiJ_G0032120.1 mouse_genomes_project 7 130493680 130496313 - MGP_WSBEiJ_P0085113 Sh2b1 protein_coding protein_coding MGP_WSBEiJ_T0005190.1 MGP_WSBEiJ_G0004404.1 mouse_genomes_project 7 114244701 114245568 + Gm16336 antisense antisense MGP_WSBEiJ_T0082113.1 MGP_WSBEiJ_G0031275.1 mouse_genomes_project 7 43612554 43626217 + MGP_WSBEiJ_P0082113 Etfb protein_coding protein_coding MGP_WSBEiJ_T0082114.1 MGP_WSBEiJ_G0031275.1 mouse_genomes_project 7 43612590 43626081 + MGP_WSBEiJ_P0082114 Etfb protein_coding protein_coding MGP_WSBEiJ_T0082116.1 MGP_WSBEiJ_G0031275.1 mouse_genomes_project 7 43612601 43624990 + MGP_WSBEiJ_P0082116 Etfb protein_coding protein_coding MGP_WSBEiJ_T0082118.1 MGP_WSBEiJ_G0031275.1 mouse_genomes_project 7 43612621 43626198 + MGP_WSBEiJ_P0082118 Etfb protein_coding protein_coding MGP_WSBEiJ_T0082119.1 MGP_WSBEiJ_G0031275.1 mouse_genomes_project 7 43621278 43626198 + MGP_WSBEiJ_P0082119 Etfb protein_coding protein_coding MGP_WSBEiJ_T0082120.1 MGP_WSBEiJ_G0031275.1 mouse_genomes_project 7 43624917 43626197 + Etfb protein_coding processed_transcript MGP_WSBEiJ_T0082121.1 MGP_WSBEiJ_G0031275.1 mouse_genomes_project 7 43625452 43626200 + Etfb protein_coding processed_transcript MGP_WSBEiJ_T0083592.1 MGP_WSBEiJ_G0031645.1 mouse_genomes_project 7 92181723 92212970 - MGP_WSBEiJ_P0083592 Eed protein_coding protein_coding MGP_WSBEiJ_T0083593.1 MGP_WSBEiJ_G0031645.1 mouse_genomes_project 7 92208761 92212557 - Eed protein_coding processed_transcript MGP_WSBEiJ_T0080349.1 MGP_WSBEiJ_G0030823.1 mouse_genomes_project 7 10565748 10585461 - MGP_WSBEiJ_P0080349 6330408A02Rik protein_coding protein_coding MGP_WSBEiJ_T0080350.1 MGP_WSBEiJ_G0030823.1 mouse_genomes_project 7 10565748 10584922 - MGP_WSBEiJ_P0080350 6330408A02Rik protein_coding protein_coding MGP_WSBEiJ_T0080351.1 MGP_WSBEiJ_G0030823.1 mouse_genomes_project 7 10565749 10585499 - MGP_WSBEiJ_P0080351 6330408A02Rik protein_coding protein_coding MGP_WSBEiJ_T0080352.1 MGP_WSBEiJ_G0030823.1 mouse_genomes_project 7 10572503 10585499 - 6330408A02Rik protein_coding retained_intron MGP_WSBEiJ_T0080353.1 MGP_WSBEiJ_G0030823.1 mouse_genomes_project 7 10580024 10585448 - 6330408A02Rik protein_coding retained_intron MGP_WSBEiJ_T0080354.1 MGP_WSBEiJ_G0030823.1 mouse_genomes_project 7 10580133 10585200 - 6330408A02Rik protein_coding retained_intron MGP_WSBEiJ_T0080355.1 MGP_WSBEiJ_G0030823.1 mouse_genomes_project 7 10584057 10585440 - MGP_WSBEiJ_P0080355 6330408A02Rik protein_coding protein_coding MGP_WSBEiJ_T0086467.1 MGP_WSBEiJ_G0032405.1 mouse_genomes_project 7 148463827 148466528 - MGP_WSBEiJ_P0086467 Cdkn1c protein_coding protein_coding MGP_WSBEiJ_T0086468.1 MGP_WSBEiJ_G0032405.1 mouse_genomes_project 7 148463827 148466528 - MGP_WSBEiJ_P0086468 Cdkn1c protein_coding protein_coding MGP_WSBEiJ_T0005132.1 MGP_WSBEiJ_G0004364.1 mouse_genomes_project 7 44589663 44590388 + Gm44780 antisense antisense MGP_WSBEiJ_T0082876.1 MGP_WSBEiJ_G0031482.1 mouse_genomes_project 7 64289422 64623812 + MGP_WSBEiJ_P0082876 Otud7a protein_coding protein_coding MGP_WSBEiJ_T0082877.1 MGP_WSBEiJ_G0031482.1 mouse_genomes_project 7 64289448 64478405 + Otud7a protein_coding processed_transcript MGP_WSBEiJ_T0082878.1 MGP_WSBEiJ_G0031482.1 mouse_genomes_project 7 64511085 64622773 + MGP_WSBEiJ_P0082878 Otud7a protein_coding protein_coding MGP_WSBEiJ_T0082879.1 MGP_WSBEiJ_G0031482.1 mouse_genomes_project 7 64545166 64623515 + MGP_WSBEiJ_P0082879 Otud7a protein_coding unknown_likely_coding MGP_WSBEiJ_T0082880.1 MGP_WSBEiJ_G0031482.1 mouse_genomes_project 7 64619485 64622709 + MGP_WSBEiJ_P0082880 Otud7a protein_coding protein_coding MGP_WSBEiJ_T0081713.1 MGP_WSBEiJ_G0031191.1 mouse_genomes_project 7 29621817 29641386 + MGP_WSBEiJ_P0081713 Dmkn protein_coding protein_coding MGP_WSBEiJ_T0081714.1 MGP_WSBEiJ_G0031191.1 mouse_genomes_project 7 29621824 29641385 + MGP_WSBEiJ_P0081714 Dmkn protein_coding protein_coding MGP_WSBEiJ_T0081715.1 MGP_WSBEiJ_G0031191.1 mouse_genomes_project 7 29621824 29641385 + MGP_WSBEiJ_P0081715 Dmkn protein_coding protein_coding MGP_WSBEiJ_T0081716.1 MGP_WSBEiJ_G0031191.1 mouse_genomes_project 7 29621860 29641385 + MGP_WSBEiJ_P0081716 Dmkn protein_coding protein_coding MGP_WSBEiJ_T0081717.1 MGP_WSBEiJ_G0031191.1 mouse_genomes_project 7 29623118 29641131 + MGP_WSBEiJ_P0081717 Dmkn protein_coding protein_coding MGP_WSBEiJ_T0081718.1 MGP_WSBEiJ_G0031191.1 mouse_genomes_project 7 29635416 29641391 + MGP_WSBEiJ_P0081718 Dmkn protein_coding protein_coding MGP_WSBEiJ_T0097099.1 MGP_WSBEiJ_G0035780.1 mouse_genomes_project 7 92546751 92546864 + n-R5s155 rRNA rRNA MGP_WSBEiJ_T0015397.1 MGP_WSBEiJ_G0013527.1 mouse_genomes_project 7 125965902 125966316 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101107.1 MGP_WSBEiJ_G0039564.1 mouse_genomes_project 7 106693763 106694851 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015343.1 MGP_WSBEiJ_G0013473.1 mouse_genomes_project 7 81803770 81805656 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084371.1 MGP_WSBEiJ_G0031912.1 mouse_genomes_project 7 109780957 109783567 - MGP_WSBEiJ_P0084371 protein_coding protein_coding MGP_WSBEiJ_T0085393.1 MGP_WSBEiJ_G0032167.1 mouse_genomes_project 7 131317712 131327955 + MGP_WSBEiJ_P0085393 Zfp771 protein_coding protein_coding MGP_WSBEiJ_T0085394.1 MGP_WSBEiJ_G0032167.1 mouse_genomes_project 7 131318527 131319138 + Zfp771 protein_coding processed_transcript MGP_WSBEiJ_T0085395.1 MGP_WSBEiJ_G0032167.1 mouse_genomes_project 7 131318613 131327024 + MGP_WSBEiJ_P0085395 Zfp771 protein_coding protein_coding MGP_WSBEiJ_T0015234.1 MGP_WSBEiJ_G0013364.1 mouse_genomes_project 7 14147219 14147958 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080655.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17281498 17295844 + MGP_WSBEiJ_P0080655 Ercc1 protein_coding protein_coding MGP_WSBEiJ_T0080656.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17281821 17292622 + Ercc1 protein_coding retained_intron MGP_WSBEiJ_T0080657.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17281827 17287260 + Ercc1 protein_coding retained_intron MGP_WSBEiJ_T0080658.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17281869 17291991 + MGP_WSBEiJ_P0080658 Ercc1 protein_coding protein_coding MGP_WSBEiJ_T0080659.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17281880 17286907 + MGP_WSBEiJ_P0080659 Ercc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080660.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17285244 17289739 + MGP_WSBEiJ_P0080660 Ercc1 protein_coding protein_coding MGP_WSBEiJ_T0080661.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17286196 17291498 + Ercc1 protein_coding processed_transcript MGP_WSBEiJ_T0080662.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17289206 17292327 + Ercc1 protein_coding retained_intron MGP_WSBEiJ_T0080663.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17289666 17295842 + MGP_WSBEiJ_P0080663 Ercc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080664.1 MGP_WSBEiJ_G0030917.1 mouse_genomes_project 7 17291518 17295843 + Ercc1 protein_coding retained_intron MGP_WSBEiJ_T0011496.1 MGP_WSBEiJ_G0009653.1 mouse_genomes_project 7 131258710 131258923 + Gm25735 misc_RNA misc_RNA MGP_WSBEiJ_T0082987.1 MGP_WSBEiJ_G0031502.1 mouse_genomes_project 7 67332319 67369805 - MGP_WSBEiJ_P0082987 Aldh1a3 protein_coding protein_coding MGP_WSBEiJ_T0082988.1 MGP_WSBEiJ_G0031502.1 mouse_genomes_project 7 67341317 67347420 - Aldh1a3 protein_coding retained_intron MGP_WSBEiJ_T0082989.1 MGP_WSBEiJ_G0031502.1 mouse_genomes_project 7 67343466 67361503 - MGP_WSBEiJ_P0082989 Aldh1a3 protein_coding protein_coding MGP_WSBEiJ_T0082990.1 MGP_WSBEiJ_G0031502.1 mouse_genomes_project 7 67349928 67368877 - Aldh1a3 protein_coding processed_transcript MGP_WSBEiJ_T0082991.1 MGP_WSBEiJ_G0031502.1 mouse_genomes_project 7 67351214 67367989 - Aldh1a3 protein_coding processed_transcript MGP_WSBEiJ_T0080543.1 MGP_WSBEiJ_G0030878.1 mouse_genomes_project 7 14760270 14788213 + MGP_WSBEiJ_P0080543 Psg16 protein_coding protein_coding MGP_WSBEiJ_T0080544.1 MGP_WSBEiJ_G0030878.1 mouse_genomes_project 7 14760347 14783521 + Psg16 protein_coding retained_intron MGP_WSBEiJ_T0080545.1 MGP_WSBEiJ_G0030878.1 mouse_genomes_project 7 14774762 14780723 + MGP_WSBEiJ_P0080545 Psg16 protein_coding protein_coding MGP_WSBEiJ_T0081106.1 MGP_WSBEiJ_G0031044.1 mouse_genomes_project 7 25613477 25628104 + MGP_WSBEiJ_P0081106 Cyp2f2 protein_coding protein_coding MGP_WSBEiJ_T0081107.1 MGP_WSBEiJ_G0031044.1 mouse_genomes_project 7 25613529 25619990 + Cyp2f2 protein_coding processed_transcript MGP_WSBEiJ_T0081108.1 MGP_WSBEiJ_G0031044.1 mouse_genomes_project 7 25616524 25625680 + MGP_WSBEiJ_P0081108 Cyp2f2 protein_coding protein_coding MGP_WSBEiJ_T0082513.1 MGP_WSBEiJ_G0031382.1 mouse_genomes_project 7 45907261 45921754 + MGP_WSBEiJ_P0082513 Hsd17b14 protein_coding protein_coding MGP_WSBEiJ_T0082514.1 MGP_WSBEiJ_G0031382.1 mouse_genomes_project 7 45907305 45922185 + MGP_WSBEiJ_P0082514 Hsd17b14 protein_coding protein_coding MGP_WSBEiJ_T0082515.1 MGP_WSBEiJ_G0031382.1 mouse_genomes_project 7 45909713 45921751 + Hsd17b14 protein_coding retained_intron MGP_WSBEiJ_T0082516.1 MGP_WSBEiJ_G0031382.1 mouse_genomes_project 7 45913651 45920442 + Hsd17b14 protein_coding retained_intron MGP_WSBEiJ_T0082517.1 MGP_WSBEiJ_G0031382.1 mouse_genomes_project 7 45916549 45920617 + Hsd17b14 protein_coding processed_transcript MGP_WSBEiJ_T0082518.1 MGP_WSBEiJ_G0031382.1 mouse_genomes_project 7 45916560 45921120 + Hsd17b14 protein_coding processed_transcript MGP_WSBEiJ_T0082519.1 MGP_WSBEiJ_G0031382.1 mouse_genomes_project 7 45917519 45920634 + Hsd17b14 protein_coding processed_transcript MGP_WSBEiJ_T0011498.1 MGP_WSBEiJ_G0009655.1 mouse_genomes_project 7 141043574 141043882 - Gm24444 misc_RNA misc_RNA MGP_WSBEiJ_T0080969.1 MGP_WSBEiJ_G0031006.1 mouse_genomes_project 7 23507270 23515180 - MGP_WSBEiJ_P0080969 Erf protein_coding protein_coding MGP_WSBEiJ_T0080970.1 MGP_WSBEiJ_G0031006.1 mouse_genomes_project 7 23509869 23515149 - MGP_WSBEiJ_P0080970 Erf protein_coding protein_coding MGP_WSBEiJ_T0084710.1 MGP_WSBEiJ_G0032031.1 mouse_genomes_project 7 120070645 120108328 + MGP_WSBEiJ_P0084710 Nucb2 protein_coding protein_coding MGP_WSBEiJ_T0084711.1 MGP_WSBEiJ_G0032031.1 mouse_genomes_project 7 120070660 120075958 + Nucb2 protein_coding processed_transcript MGP_WSBEiJ_T0084712.1 MGP_WSBEiJ_G0032031.1 mouse_genomes_project 7 120070691 120108187 + MGP_WSBEiJ_P0084712 Nucb2 protein_coding protein_coding MGP_WSBEiJ_T0084713.1 MGP_WSBEiJ_G0032031.1 mouse_genomes_project 7 120096454 120103678 + MGP_WSBEiJ_P0084713 Nucb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100979.1 MGP_WSBEiJ_G0039436.1 mouse_genomes_project 7 9651018 9651417 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0101027.1 MGP_WSBEiJ_G0039484.1 mouse_genomes_project 7 33242175 33250723 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081434.1 MGP_WSBEiJ_G0031125.1 mouse_genomes_project 7 27963452 27977630 - MGP_WSBEiJ_P0081434 Kcnk6 protein_coding protein_coding MGP_WSBEiJ_T0085555.1 MGP_WSBEiJ_G0032202.1 mouse_genomes_project 7 132033156 132039256 + MGP_WSBEiJ_P0085555 Bckdk protein_coding protein_coding MGP_WSBEiJ_T0085556.1 MGP_WSBEiJ_G0032202.1 mouse_genomes_project 7 132033177 132035032 + Bckdk protein_coding retained_intron MGP_WSBEiJ_T0085557.1 MGP_WSBEiJ_G0032202.1 mouse_genomes_project 7 132033714 132035241 + MGP_WSBEiJ_P0085557 Bckdk protein_coding protein_coding MGP_WSBEiJ_T0085558.1 MGP_WSBEiJ_G0032202.1 mouse_genomes_project 7 132033836 132037678 + MGP_WSBEiJ_P0085558 Bckdk protein_coding protein_coding MGP_WSBEiJ_T0085559.1 MGP_WSBEiJ_G0032202.1 mouse_genomes_project 7 132033836 132037678 + MGP_WSBEiJ_P0085559 Bckdk protein_coding protein_coding MGP_WSBEiJ_T0085560.1 MGP_WSBEiJ_G0032202.1 mouse_genomes_project 7 132033991 132035453 + MGP_WSBEiJ_P0085560 Bckdk protein_coding protein_coding MGP_WSBEiJ_T0085561.1 MGP_WSBEiJ_G0032202.1 mouse_genomes_project 7 132036309 132037670 + MGP_WSBEiJ_P0085561 Bckdk protein_coding protein_coding MGP_WSBEiJ_T0005116.1 MGP_WSBEiJ_G0004353.1 mouse_genomes_project 7 33510015 33516285 + Gm12758 antisense antisense MGP_WSBEiJ_T0005117.1 MGP_WSBEiJ_G0004353.1 mouse_genomes_project 7 33510079 33511196 + Gm12758 antisense antisense MGP_WSBEiJ_T0082324.1 MGP_WSBEiJ_G0031332.1 mouse_genomes_project 7 45119397 45127401 - Tbc1d17 protein_coding retained_intron MGP_WSBEiJ_T0082325.1 MGP_WSBEiJ_G0031332.1 mouse_genomes_project 7 45119516 45127565 - MGP_WSBEiJ_P0082325 Tbc1d17 protein_coding protein_coding MGP_WSBEiJ_T0082326.1 MGP_WSBEiJ_G0031332.1 mouse_genomes_project 7 45119524 45127569 - MGP_WSBEiJ_P0082326 Tbc1d17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082327.1 MGP_WSBEiJ_G0031332.1 mouse_genomes_project 7 45119525 45127380 - Tbc1d17 protein_coding retained_intron MGP_WSBEiJ_T0082328.1 MGP_WSBEiJ_G0031332.1 mouse_genomes_project 7 45121871 45122814 - Tbc1d17 protein_coding retained_intron MGP_WSBEiJ_T0082329.1 MGP_WSBEiJ_G0031332.1 mouse_genomes_project 7 45123066 45124490 - Tbc1d17 protein_coding retained_intron MGP_WSBEiJ_T0082330.1 MGP_WSBEiJ_G0031332.1 mouse_genomes_project 7 45126515 45127385 - Tbc1d17 protein_coding retained_intron MGP_WSBEiJ_T0082331.1 MGP_WSBEiJ_G0031332.1 mouse_genomes_project 7 45126764 45127084 - Tbc1d17 protein_coding retained_intron MGP_WSBEiJ_T0098482.1 MGP_WSBEiJ_G0037145.1 mouse_genomes_project 7 56140038 56140145 - Gm24116 snRNA snRNA MGP_WSBEiJ_T0084463.1 MGP_WSBEiJ_G0031981.1 mouse_genomes_project 7 112776650 112781684 + MGP_WSBEiJ_P0084463 Rpl27a protein_coding protein_coding MGP_WSBEiJ_T0084464.1 MGP_WSBEiJ_G0031981.1 mouse_genomes_project 7 112776699 112780470 + Rpl27a protein_coding retained_intron MGP_WSBEiJ_T0084465.1 MGP_WSBEiJ_G0031981.1 mouse_genomes_project 7 112776702 112777685 + Rpl27a protein_coding retained_intron MGP_WSBEiJ_T0084466.1 MGP_WSBEiJ_G0031981.1 mouse_genomes_project 7 112776716 112781083 + Rpl27a protein_coding retained_intron MGP_WSBEiJ_T0084467.1 MGP_WSBEiJ_G0031981.1 mouse_genomes_project 7 112776723 112778103 + MGP_WSBEiJ_P0084467 Rpl27a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084468.1 MGP_WSBEiJ_G0031981.1 mouse_genomes_project 7 112776773 112777444 + Rpl27a protein_coding retained_intron MGP_WSBEiJ_T0080491.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14479262 14505876 + MGP_WSBEiJ_P0080491 Strn4 protein_coding protein_coding MGP_WSBEiJ_T0080492.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14479690 14505872 + MGP_WSBEiJ_P0080492 Strn4 protein_coding protein_coding MGP_WSBEiJ_T0080493.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14479751 14492186 + MGP_WSBEiJ_P0080493 Strn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080494.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14485417 14487554 + Strn4 protein_coding processed_transcript MGP_WSBEiJ_T0080495.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14486443 14497347 + MGP_WSBEiJ_P0080495 Strn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080496.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14487429 14492123 + Strn4 protein_coding retained_intron MGP_WSBEiJ_T0080497.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14492150 14495011 + Strn4 protein_coding retained_intron MGP_WSBEiJ_T0080498.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14493505 14494881 + Strn4 protein_coding processed_transcript MGP_WSBEiJ_T0080499.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14494470 14502927 + MGP_WSBEiJ_P0080499 Strn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080500.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14495985 14497363 + Strn4 protein_coding retained_intron MGP_WSBEiJ_T0080501.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14496536 14498024 + Strn4 protein_coding retained_intron MGP_WSBEiJ_T0080502.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14499599 14505876 + Strn4 protein_coding retained_intron MGP_WSBEiJ_T0080503.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14502579 14505181 + MGP_WSBEiJ_P0080503 Strn4 protein_coding protein_coding MGP_WSBEiJ_T0080504.1 MGP_WSBEiJ_G0030867.1 mouse_genomes_project 7 14503500 14504964 + Strn4 protein_coding retained_intron MGP_WSBEiJ_T0083193.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80929044 80948958 - MGP_WSBEiJ_P0083193 Polg protein_coding protein_coding MGP_WSBEiJ_T0083194.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80932194 80934451 - MGP_WSBEiJ_P0083194 Polg protein_coding protein_coding MGP_WSBEiJ_T0083195.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80932195 80937897 - Polg protein_coding retained_intron MGP_WSBEiJ_T0083196.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80932195 80948783 - Polg protein_coding retained_intron MGP_WSBEiJ_T0083197.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80932195 80933431 - MGP_WSBEiJ_P0083197 Polg protein_coding protein_coding MGP_WSBEiJ_T0083198.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80932376 80948776 - MGP_WSBEiJ_P0083198 Polg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083199.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80932979 80934897 - Polg protein_coding retained_intron MGP_WSBEiJ_T0083200.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80934403 80934739 - MGP_WSBEiJ_P0083200 Polg protein_coding protein_coding MGP_WSBEiJ_T0083201.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80934416 80936603 - MGP_WSBEiJ_P0083201 Polg protein_coding protein_coding MGP_WSBEiJ_T0083202.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80934746 80937157 - Polg protein_coding retained_intron MGP_WSBEiJ_T0083203.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80936762 80938882 - Polg protein_coding retained_intron MGP_WSBEiJ_T0083204.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80937347 80938211 - Polg protein_coding retained_intron MGP_WSBEiJ_T0083205.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80938302 80942258 - MGP_WSBEiJ_P0083205 Polg protein_coding protein_coding MGP_WSBEiJ_T0083206.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80938886 80942613 - MGP_WSBEiJ_P0083206 Polg protein_coding protein_coding MGP_WSBEiJ_T0083207.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80942338 80944621 - Polg protein_coding processed_transcript MGP_WSBEiJ_T0083208.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80946511 80948790 - Polg protein_coding retained_intron MGP_WSBEiJ_T0083209.1 MGP_WSBEiJ_G0031539.1 mouse_genomes_project 7 80947490 80948666 - MGP_WSBEiJ_P0083209 Polg protein_coding protein_coding MGP_WSBEiJ_T0080467.1 MGP_WSBEiJ_G0030859.1 mouse_genomes_project 7 14082986 14085696 + MGP_WSBEiJ_P0080467 Tmem160 protein_coding protein_coding MGP_WSBEiJ_T0002280.1 MGP_WSBEiJ_G0002198.1 mouse_genomes_project 7 149835042 149836386 + TEC TEC MGP_WSBEiJ_T0015219.1 MGP_WSBEiJ_G0013349.1 mouse_genomes_project 7 9476010 9476665 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005143.1 MGP_WSBEiJ_G0004372.1 mouse_genomes_project 7 65230676 65238965 - Gm20457 antisense antisense MGP_WSBEiJ_T0008678.1 MGP_WSBEiJ_G0007017.1 mouse_genomes_project 7 28642348 28648288 + Gm26554 lincRNA lincRNA MGP_WSBEiJ_T0101081.1 MGP_WSBEiJ_G0039538.1 mouse_genomes_project 7 87549053 87549928 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100998.1 MGP_WSBEiJ_G0039455.1 mouse_genomes_project 7 13206702 13206998 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081109.1 MGP_WSBEiJ_G0031045.1 mouse_genomes_project 7 25649539 25656137 + MGP_WSBEiJ_P0081109 Cyp2t4 protein_coding protein_coding MGP_WSBEiJ_T0081110.1 MGP_WSBEiJ_G0031045.1 mouse_genomes_project 7 25652778 25656241 + MGP_WSBEiJ_P0081110 Cyp2t4 protein_coding protein_coding MGP_WSBEiJ_T0008889.1 MGP_WSBEiJ_G0007160.1 mouse_genomes_project 7 132118761 132121128 - Gm26690 lincRNA lincRNA MGP_WSBEiJ_T0080150.1 MGP_WSBEiJ_G0030732.1 mouse_genomes_project 7 1876606 1896431 + MGP_WSBEiJ_P0080150 Ssc5d protein_coding protein_coding MGP_WSBEiJ_T0082372.1 MGP_WSBEiJ_G0031345.1 mouse_genomes_project 7 45293932 45306920 - Scaf1 protein_coding retained_intron MGP_WSBEiJ_T0082373.1 MGP_WSBEiJ_G0031345.1 mouse_genomes_project 7 45293932 45309310 - MGP_WSBEiJ_P0082373 Scaf1 protein_coding protein_coding MGP_WSBEiJ_T0082374.1 MGP_WSBEiJ_G0031345.1 mouse_genomes_project 7 45293932 45307351 - MGP_WSBEiJ_P0082374 Scaf1 protein_coding protein_coding MGP_WSBEiJ_T0082375.1 MGP_WSBEiJ_G0031345.1 mouse_genomes_project 7 45302025 45309078 - Scaf1 protein_coding processed_transcript MGP_WSBEiJ_T0082376.1 MGP_WSBEiJ_G0031345.1 mouse_genomes_project 7 45305104 45306508 - Scaf1 protein_coding retained_intron MGP_WSBEiJ_T0082377.1 MGP_WSBEiJ_G0031345.1 mouse_genomes_project 7 45306198 45308804 - MGP_WSBEiJ_P0082377 Scaf1 protein_coding protein_coding MGP_WSBEiJ_T0082378.1 MGP_WSBEiJ_G0031345.1 mouse_genomes_project 7 45307150 45307883 - Scaf1 protein_coding processed_transcript MGP_WSBEiJ_T0015263.1 MGP_WSBEiJ_G0013393.1 mouse_genomes_project 7 28644904 28645320 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101029.1 MGP_WSBEiJ_G0039486.1 mouse_genomes_project 7 40652416 40657036 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083503.1 MGP_WSBEiJ_G0031601.1 mouse_genomes_project 7 85670117 85674641 - MGP_WSBEiJ_P0083503 Mesdc1 protein_coding protein_coding MGP_WSBEiJ_T0097103.1 MGP_WSBEiJ_G0035784.1 mouse_genomes_project 7 132971979 132972097 - n-R5s158 rRNA rRNA MGP_WSBEiJ_T0084213.1 MGP_WSBEiJ_G0031853.1 mouse_genomes_project 7 107144826 107154147 - MGP_WSBEiJ_P0084213 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084214.1 MGP_WSBEiJ_G0031853.1 mouse_genomes_project 7 107144826 107163570 - MGP_WSBEiJ_P0084214 protein_coding protein_coding MGP_WSBEiJ_T0010668.1 MGP_WSBEiJ_G0008825.1 mouse_genomes_project 7 23478018 23478076 - Mir7048 miRNA miRNA MGP_WSBEiJ_T0015268.1 MGP_WSBEiJ_G0013398.1 mouse_genomes_project 7 33105472 33106262 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015292.1 MGP_WSBEiJ_G0013422.1 mouse_genomes_project 7 42483018 42484753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083231.1 MGP_WSBEiJ_G0031544.1 mouse_genomes_project 7 81237336 81245444 - MGP_WSBEiJ_P0083231 Pex11a protein_coding protein_coding MGP_WSBEiJ_T0083232.1 MGP_WSBEiJ_G0031544.1 mouse_genomes_project 7 81238468 81245495 - Pex11a protein_coding processed_transcript MGP_WSBEiJ_T0083233.1 MGP_WSBEiJ_G0031544.1 mouse_genomes_project 7 81238629 81240104 - Pex11a protein_coding retained_intron MGP_WSBEiJ_T0083234.1 MGP_WSBEiJ_G0031544.1 mouse_genomes_project 7 81239151 81241736 - Pex11a protein_coding retained_intron MGP_WSBEiJ_T0084885.1 MGP_WSBEiJ_G0032075.1 mouse_genomes_project 7 124752989 124778175 - Cdr2 protein_coding processed_transcript MGP_WSBEiJ_T0084886.1 MGP_WSBEiJ_G0032075.1 mouse_genomes_project 7 124752989 124778697 - MGP_WSBEiJ_P0084886 Cdr2 protein_coding protein_coding MGP_WSBEiJ_T0008676.1 MGP_WSBEiJ_G0007015.1 mouse_genomes_project 7 24214615 24225407 + Gm30146 lincRNA lincRNA MGP_WSBEiJ_T0005238.1 MGP_WSBEiJ_G0004439.1 mouse_genomes_project 7 148325381 148333255 - antisense antisense MGP_WSBEiJ_T0008722.1 MGP_WSBEiJ_G0007051.1 mouse_genomes_project 7 43848791 43849265 - Gm44819 lincRNA lincRNA MGP_WSBEiJ_T0010739.1 MGP_WSBEiJ_G0008896.1 mouse_genomes_project 7 131102886 131102976 - Gm44343 miRNA miRNA MGP_WSBEiJ_T0084442.1 MGP_WSBEiJ_G0031974.1 mouse_genomes_project 7 112148190 112157832 - MGP_WSBEiJ_P0084442 Nlrp10 protein_coding protein_coding MGP_WSBEiJ_T0017811.1 MGP_WSBEiJ_G0015108.1 mouse_genomes_project 7 121895554 121897245 + 4930583K01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0002241.1 MGP_WSBEiJ_G0002159.1 mouse_genomes_project 7 83197495 83199708 - TEC TEC MGP_WSBEiJ_T0082008.1 MGP_WSBEiJ_G0031245.1 mouse_genomes_project 7 35183831 35214259 - MGP_WSBEiJ_P0082008 Zfp507 protein_coding protein_coding MGP_WSBEiJ_T0082009.1 MGP_WSBEiJ_G0031245.1 mouse_genomes_project 7 35185209 35205310 - MGP_WSBEiJ_P0082009 Zfp507 protein_coding protein_coding MGP_WSBEiJ_T0082010.1 MGP_WSBEiJ_G0031245.1 mouse_genomes_project 7 35187456 35214237 - MGP_WSBEiJ_P0082010 Zfp507 protein_coding protein_coding MGP_WSBEiJ_T0082011.1 MGP_WSBEiJ_G0031245.1 mouse_genomes_project 7 35190312 35190481 - Zfp507 protein_coding processed_transcript MGP_WSBEiJ_T0082012.1 MGP_WSBEiJ_G0031245.1 mouse_genomes_project 7 35203052 35214256 - MGP_WSBEiJ_P0082012 Zfp507 protein_coding protein_coding MGP_WSBEiJ_T0082013.1 MGP_WSBEiJ_G0031245.1 mouse_genomes_project 7 35212279 35214224 - Zfp507 protein_coding retained_intron MGP_WSBEiJ_T0082014.1 MGP_WSBEiJ_G0031245.1 mouse_genomes_project 7 35213286 35214273 - Zfp507 protein_coding retained_intron MGP_WSBEiJ_T0086207.1 MGP_WSBEiJ_G0032364.1 mouse_genomes_project 7 146240844 146252745 + MGP_WSBEiJ_P0086207 Taldo1 protein_coding protein_coding MGP_WSBEiJ_T0086208.1 MGP_WSBEiJ_G0032364.1 mouse_genomes_project 7 146240888 146248841 + Taldo1 protein_coding retained_intron MGP_WSBEiJ_T0086209.1 MGP_WSBEiJ_G0032364.1 mouse_genomes_project 7 146249936 146251989 + Taldo1 protein_coding retained_intron MGP_WSBEiJ_T0083568.1 MGP_WSBEiJ_G0031638.1 mouse_genomes_project 7 91346608 91545593 - MGP_WSBEiJ_P0083568 Tmem135 protein_coding protein_coding MGP_WSBEiJ_T0083569.1 MGP_WSBEiJ_G0031638.1 mouse_genomes_project 7 91348741 91361229 - Tmem135 protein_coding retained_intron MGP_WSBEiJ_T0083570.1 MGP_WSBEiJ_G0031638.1 mouse_genomes_project 7 91352952 91545566 - MGP_WSBEiJ_P0083570 Tmem135 protein_coding protein_coding MGP_WSBEiJ_T0083571.1 MGP_WSBEiJ_G0031638.1 mouse_genomes_project 7 91361055 91366546 - Tmem135 protein_coding processed_transcript MGP_WSBEiJ_T0083572.1 MGP_WSBEiJ_G0031638.1 mouse_genomes_project 7 91363376 91607104 - Tmem135 protein_coding processed_transcript MGP_WSBEiJ_T0083573.1 MGP_WSBEiJ_G0031638.1 mouse_genomes_project 7 91365906 91503450 - Tmem135 protein_coding processed_transcript MGP_WSBEiJ_T0083574.1 MGP_WSBEiJ_G0031638.1 mouse_genomes_project 7 91510431 91545514 - Tmem135 protein_coding retained_intron MGP_WSBEiJ_T0083575.1 MGP_WSBEiJ_G0031638.1 mouse_genomes_project 7 91511408 91545558 - MGP_WSBEiJ_P0083575 Tmem135 protein_coding protein_coding MGP_WSBEiJ_T0080787.1 MGP_WSBEiJ_G0030958.1 mouse_genomes_project 7 21841661 21848221 + MGP_WSBEiJ_P0080787 Vmn1r174 protein_coding protein_coding MGP_WSBEiJ_T0080710.1 MGP_WSBEiJ_G0030932.1 mouse_genomes_project 7 17535015 17559492 - MGP_WSBEiJ_P0080710 Clasrp protein_coding protein_coding MGP_WSBEiJ_T0008653.1 MGP_WSBEiJ_G0006995.1 mouse_genomes_project 7 280216 294761 - Gm44257 lincRNA lincRNA MGP_WSBEiJ_T0002219.1 MGP_WSBEiJ_G0002137.1 mouse_genomes_project 7 77031822 77033123 + TEC TEC MGP_WSBEiJ_T0080961.1 MGP_WSBEiJ_G0031003.1 mouse_genomes_project 7 23459174 23480209 - Dedd2 protein_coding processed_transcript MGP_WSBEiJ_T0080962.1 MGP_WSBEiJ_G0031003.1 mouse_genomes_project 7 23462099 23480209 - MGP_WSBEiJ_P0080962 Dedd2 protein_coding protein_coding MGP_WSBEiJ_T0080963.1 MGP_WSBEiJ_G0031003.1 mouse_genomes_project 7 23462100 23480965 - MGP_WSBEiJ_P0080963 Dedd2 protein_coding protein_coding MGP_WSBEiJ_T0080964.1 MGP_WSBEiJ_G0031003.1 mouse_genomes_project 7 23477447 23480221 - Dedd2 protein_coding retained_intron MGP_WSBEiJ_T0080250.1 MGP_WSBEiJ_G0030780.1 mouse_genomes_project 7 7495308 7496832 - MGP_WSBEiJ_P0080250 Vmn1r66 protein_coding protein_coding MGP_WSBEiJ_T0085245.1 MGP_WSBEiJ_G0032140.1 mouse_genomes_project 7 130843921 130880574 + MGP_WSBEiJ_P0085245 Fam57b protein_coding protein_coding MGP_WSBEiJ_T0085246.1 MGP_WSBEiJ_G0032140.1 mouse_genomes_project 7 130861503 130872356 + Fam57b protein_coding processed_transcript MGP_WSBEiJ_T0085247.1 MGP_WSBEiJ_G0032140.1 mouse_genomes_project 7 130862856 130866044 + Fam57b protein_coding processed_transcript MGP_WSBEiJ_T0085248.1 MGP_WSBEiJ_G0032140.1 mouse_genomes_project 7 130865698 130877888 + MGP_WSBEiJ_P0085248 Fam57b protein_coding protein_coding MGP_WSBEiJ_T0085249.1 MGP_WSBEiJ_G0032140.1 mouse_genomes_project 7 130865699 130880578 + MGP_WSBEiJ_P0085249 Fam57b protein_coding protein_coding MGP_WSBEiJ_T0085250.1 MGP_WSBEiJ_G0032140.1 mouse_genomes_project 7 130874446 130880576 + MGP_WSBEiJ_P0085250 Fam57b protein_coding protein_coding MGP_WSBEiJ_T0085744.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135150810 135199737 + MGP_WSBEiJ_P0085744 Plekha1 protein_coding protein_coding MGP_WSBEiJ_T0085745.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135150939 135181188 + Plekha1 protein_coding retained_intron MGP_WSBEiJ_T0085746.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135150941 135164247 + Plekha1 protein_coding retained_intron MGP_WSBEiJ_T0085747.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135150952 135198493 + MGP_WSBEiJ_P0085747 Plekha1 protein_coding protein_coding MGP_WSBEiJ_T0085748.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135150957 135196216 + MGP_WSBEiJ_P0085748 Plekha1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085749.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135150964 135199727 + MGP_WSBEiJ_P0085749 Plekha1 protein_coding protein_coding MGP_WSBEiJ_T0085750.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135168100 135171269 + Plekha1 protein_coding retained_intron MGP_WSBEiJ_T0085751.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135183431 135191833 + Plekha1 protein_coding retained_intron MGP_WSBEiJ_T0085752.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135186969 135196071 + Plekha1 protein_coding processed_transcript MGP_WSBEiJ_T0085753.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135188651 135195295 + Plekha1 protein_coding retained_intron MGP_WSBEiJ_T0085754.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135191310 135197588 + MGP_WSBEiJ_P0085754 Plekha1 protein_coding protein_coding MGP_WSBEiJ_T0085755.1 MGP_WSBEiJ_G0032233.1 mouse_genomes_project 7 135191710 135197326 + Plekha1 protein_coding retained_intron MGP_WSBEiJ_T0082122.1 MGP_WSBEiJ_G0031277.1 mouse_genomes_project 7 43631560 43640422 + MGP_WSBEiJ_P0082122 Vsig10l protein_coding protein_coding MGP_WSBEiJ_T0082123.1 MGP_WSBEiJ_G0031277.1 mouse_genomes_project 7 43631642 43639454 + MGP_WSBEiJ_P0082123 Vsig10l protein_coding protein_coding MGP_WSBEiJ_T0082124.1 MGP_WSBEiJ_G0031277.1 mouse_genomes_project 7 43633086 43633743 + Vsig10l protein_coding retained_intron MGP_WSBEiJ_T0082125.1 MGP_WSBEiJ_G0031277.1 mouse_genomes_project 7 43634123 43636089 + Vsig10l protein_coding processed_transcript MGP_WSBEiJ_T0082126.1 MGP_WSBEiJ_G0031277.1 mouse_genomes_project 7 43636025 43639409 + MGP_WSBEiJ_P0082126 Vsig10l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084409.1 MGP_WSBEiJ_G0031942.1 mouse_genomes_project 7 110901355 110925925 - MGP_WSBEiJ_P0084409 Ovch2 protein_coding protein_coding MGP_WSBEiJ_T0015389.1 MGP_WSBEiJ_G0013519.1 mouse_genomes_project 7 112625301 112626699 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081379.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27609804 27679121 - MGP_WSBEiJ_P0081379 Actn4 protein_coding protein_coding MGP_WSBEiJ_T0081380.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27609805 27678964 - MGP_WSBEiJ_P0081380 Actn4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081381.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27609805 27678964 - MGP_WSBEiJ_P0081381 Actn4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081382.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27610209 27623944 - Actn4 protein_coding processed_transcript MGP_WSBEiJ_T0081383.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27610788 27611409 - Actn4 protein_coding retained_intron MGP_WSBEiJ_T0081384.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27612198 27613588 - Actn4 protein_coding retained_intron MGP_WSBEiJ_T0081385.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27615176 27679004 - MGP_WSBEiJ_P0081385 Actn4 protein_coding protein_coding MGP_WSBEiJ_T0081386.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27618471 27624245 - Actn4 protein_coding processed_transcript MGP_WSBEiJ_T0081387.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27623572 27635785 - MGP_WSBEiJ_P0081387 Actn4 protein_coding protein_coding MGP_WSBEiJ_T0081388.1 MGP_WSBEiJ_G0031115.1 mouse_genomes_project 7 27629940 27666431 - MGP_WSBEiJ_P0081388 Actn4 protein_coding protein_coding MGP_WSBEiJ_T0084149.1 MGP_WSBEiJ_G0031803.1 mouse_genomes_project 7 106320475 106321447 - MGP_WSBEiJ_P0084149 protein_coding protein_coding MGP_WSBEiJ_T0002208.1 MGP_WSBEiJ_G0002127.1 mouse_genomes_project 7 74678433 74680461 - TEC TEC MGP_WSBEiJ_T0085562.1 MGP_WSBEiJ_G0032203.1 mouse_genomes_project 7 132041530 132045102 + Kat8 protein_coding retained_intron MGP_WSBEiJ_T0085563.1 MGP_WSBEiJ_G0032203.1 mouse_genomes_project 7 132041530 132054836 + MGP_WSBEiJ_P0085563 Kat8 protein_coding protein_coding MGP_WSBEiJ_T0085564.1 MGP_WSBEiJ_G0032203.1 mouse_genomes_project 7 132043166 132049510 + MGP_WSBEiJ_P0085564 Kat8 protein_coding protein_coding MGP_WSBEiJ_T0085565.1 MGP_WSBEiJ_G0032203.1 mouse_genomes_project 7 132048786 132049578 + Kat8 protein_coding retained_intron MGP_WSBEiJ_T0101111.1 MGP_WSBEiJ_G0039568.1 mouse_genomes_project 7 106854122 106855028 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080479.1 MGP_WSBEiJ_G0030865.1 mouse_genomes_project 7 14440705 14460250 + MGP_WSBEiJ_P0080479 Slc1a5 protein_coding protein_coding MGP_WSBEiJ_T0080480.1 MGP_WSBEiJ_G0030865.1 mouse_genomes_project 7 14440733 14460250 + Slc1a5 protein_coding retained_intron MGP_WSBEiJ_T0080481.1 MGP_WSBEiJ_G0030865.1 mouse_genomes_project 7 14441763 14446248 + Slc1a5 protein_coding retained_intron MGP_WSBEiJ_T0080482.1 MGP_WSBEiJ_G0030865.1 mouse_genomes_project 7 14444102 14455678 + Slc1a5 protein_coding processed_transcript MGP_WSBEiJ_T0080483.1 MGP_WSBEiJ_G0030865.1 mouse_genomes_project 7 14444729 14446237 + Slc1a5 protein_coding retained_intron MGP_WSBEiJ_T0080484.1 MGP_WSBEiJ_G0030865.1 mouse_genomes_project 7 14445439 14455768 + Slc1a5 protein_coding retained_intron MGP_WSBEiJ_T0080485.1 MGP_WSBEiJ_G0030865.1 mouse_genomes_project 7 14454998 14458131 + Slc1a5 protein_coding processed_transcript MGP_WSBEiJ_T0080486.1 MGP_WSBEiJ_G0030865.1 mouse_genomes_project 7 14455148 14457915 + Slc1a5 protein_coding retained_intron MGP_WSBEiJ_T0082384.1 MGP_WSBEiJ_G0031350.1 mouse_genomes_project 7 45385884 45396355 - MGP_WSBEiJ_P0082384 Rcn3 protein_coding protein_coding MGP_WSBEiJ_T0084158.1 MGP_WSBEiJ_G0031812.1 mouse_genomes_project 7 106475083 106486403 + MGP_WSBEiJ_P0084158 protein_coding protein_coding MGP_WSBEiJ_T0002179.1 MGP_WSBEiJ_G0002098.1 mouse_genomes_project 7 43874260 43874713 + TEC TEC MGP_WSBEiJ_T0015335.1 MGP_WSBEiJ_G0013465.1 mouse_genomes_project 7 75997483 75997714 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082980.1 MGP_WSBEiJ_G0031501.1 mouse_genomes_project 7 67158112 67201286 - Lrrk1 protein_coding processed_transcript MGP_WSBEiJ_T0082981.1 MGP_WSBEiJ_G0031501.1 mouse_genomes_project 7 67197560 67329778 - MGP_WSBEiJ_P0082981 Lrrk1 protein_coding protein_coding MGP_WSBEiJ_T0082982.1 MGP_WSBEiJ_G0031501.1 mouse_genomes_project 7 67197567 67204387 - Lrrk1 protein_coding retained_intron MGP_WSBEiJ_T0082983.1 MGP_WSBEiJ_G0031501.1 mouse_genomes_project 7 67197999 67222445 - MGP_WSBEiJ_P0082983 Lrrk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082984.1 MGP_WSBEiJ_G0031501.1 mouse_genomes_project 7 67205005 67208616 - Lrrk1 protein_coding retained_intron MGP_WSBEiJ_T0082985.1 MGP_WSBEiJ_G0031501.1 mouse_genomes_project 7 67277355 67279117 - Lrrk1 protein_coding processed_transcript MGP_WSBEiJ_T0082986.1 MGP_WSBEiJ_G0031501.1 mouse_genomes_project 7 67277524 67329735 - Lrrk1 protein_coding retained_intron MGP_WSBEiJ_T0101021.1 MGP_WSBEiJ_G0039478.1 mouse_genomes_project 7 33024179 33025005 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005082.1 MGP_WSBEiJ_G0004326.1 mouse_genomes_project 7 17784683 17786947 + Gm16175 antisense antisense MGP_WSBEiJ_T0084376.1 MGP_WSBEiJ_G0031917.1 mouse_genomes_project 7 109883134 109889721 + MGP_WSBEiJ_P0084376 Olfr701 protein_coding protein_coding MGP_WSBEiJ_T0084377.1 MGP_WSBEiJ_G0031917.1 mouse_genomes_project 7 109883169 109888112 + MGP_WSBEiJ_P0084377 Olfr701 protein_coding protein_coding MGP_WSBEiJ_T0098477.1 MGP_WSBEiJ_G0037140.1 mouse_genomes_project 7 45574204 45574306 - Gm23585 snRNA snRNA MGP_WSBEiJ_T0002209.1 MGP_WSBEiJ_G0002128.1 mouse_genomes_project 7 74722296 74723543 - TEC TEC MGP_WSBEiJ_T0082964.1 MGP_WSBEiJ_G0031497.1 mouse_genomes_project 7 66966208 66984439 + MGP_WSBEiJ_P0082964 Gm45213 protein_coding protein_coding MGP_WSBEiJ_T0005221.1 MGP_WSBEiJ_G0004427.1 mouse_genomes_project 7 132922831 132923960 + Gm44674 antisense antisense MGP_WSBEiJ_T0080818.1 MGP_WSBEiJ_G0030970.1 mouse_genomes_project 7 22387247 22396949 + MGP_WSBEiJ_P0080818 protein_coding protein_coding MGP_WSBEiJ_T0085913.1 MGP_WSBEiJ_G0032277.1 mouse_genomes_project 7 141946860 141990288 - 9430038I01Rik protein_coding processed_transcript MGP_WSBEiJ_T0085914.1 MGP_WSBEiJ_G0032277.1 mouse_genomes_project 7 141946860 141990294 - MGP_WSBEiJ_P0085914 9430038I01Rik protein_coding protein_coding MGP_WSBEiJ_T0085915.1 MGP_WSBEiJ_G0032277.1 mouse_genomes_project 7 141947423 141990267 - MGP_WSBEiJ_P0085915 9430038I01Rik protein_coding protein_coding MGP_WSBEiJ_T0085916.1 MGP_WSBEiJ_G0032277.1 mouse_genomes_project 7 141958411 141990288 - 9430038I01Rik protein_coding retained_intron MGP_WSBEiJ_T0085917.1 MGP_WSBEiJ_G0032277.1 mouse_genomes_project 7 141958443 141990264 - MGP_WSBEiJ_P0085917 9430038I01Rik protein_coding protein_coding MGP_WSBEiJ_T0085012.1 MGP_WSBEiJ_G0032103.1 mouse_genomes_project 7 127389518 127414097 - MGP_WSBEiJ_P0085012 Zkscan2 protein_coding protein_coding MGP_WSBEiJ_T0085013.1 MGP_WSBEiJ_G0032103.1 mouse_genomes_project 7 127391870 127395043 - Zkscan2 protein_coding retained_intron MGP_WSBEiJ_T0085014.1 MGP_WSBEiJ_G0032103.1 mouse_genomes_project 7 127408366 127414579 - MGP_WSBEiJ_P0085014 Zkscan2 protein_coding protein_coding MGP_WSBEiJ_T0081517.1 MGP_WSBEiJ_G0031147.1 mouse_genomes_project 7 28898764 28907900 + Zfp260 protein_coding processed_transcript MGP_WSBEiJ_T0081518.1 MGP_WSBEiJ_G0031147.1 mouse_genomes_project 7 28898781 28911231 + MGP_WSBEiJ_P0081518 Zfp260 protein_coding protein_coding MGP_WSBEiJ_T0081519.1 MGP_WSBEiJ_G0031147.1 mouse_genomes_project 7 28899149 28903717 + Zfp260 protein_coding retained_intron MGP_WSBEiJ_T0081520.1 MGP_WSBEiJ_G0031147.1 mouse_genomes_project 7 28899156 28908368 + MGP_WSBEiJ_P0081520 Zfp260 protein_coding protein_coding MGP_WSBEiJ_T0081521.1 MGP_WSBEiJ_G0031147.1 mouse_genomes_project 7 28899165 28911228 + Zfp260 protein_coding processed_transcript MGP_WSBEiJ_T0081522.1 MGP_WSBEiJ_G0031147.1 mouse_genomes_project 7 28899172 28911223 + MGP_WSBEiJ_P0081522 Zfp260 protein_coding protein_coding MGP_WSBEiJ_T0081523.1 MGP_WSBEiJ_G0031147.1 mouse_genomes_project 7 28901762 28903700 + Zfp260 protein_coding retained_intron MGP_WSBEiJ_T0084894.1 MGP_WSBEiJ_G0032080.1 mouse_genomes_project 7 124882803 124965790 + MGP_WSBEiJ_P0084894 Otoa protein_coding protein_coding MGP_WSBEiJ_T0084895.1 MGP_WSBEiJ_G0032080.1 mouse_genomes_project 7 124882889 124902174 + MGP_WSBEiJ_P0084895 Otoa protein_coding protein_coding MGP_WSBEiJ_T0084896.1 MGP_WSBEiJ_G0032080.1 mouse_genomes_project 7 124882905 124891051 + MGP_WSBEiJ_P0084896 Otoa protein_coding protein_coding MGP_WSBEiJ_T0084897.1 MGP_WSBEiJ_G0032080.1 mouse_genomes_project 7 124882905 124891069 + MGP_WSBEiJ_P0084897 Otoa protein_coding protein_coding MGP_WSBEiJ_T0084898.1 MGP_WSBEiJ_G0032080.1 mouse_genomes_project 7 124918975 124963542 + Otoa protein_coding retained_intron MGP_WSBEiJ_T0084899.1 MGP_WSBEiJ_G0032080.1 mouse_genomes_project 7 124918980 124965784 + Otoa protein_coding processed_transcript MGP_WSBEiJ_T0080274.1 MGP_WSBEiJ_G0030799.1 mouse_genomes_project 7 9664592 9672201 - MGP_WSBEiJ_P0080274 Zfp551 protein_coding protein_coding MGP_WSBEiJ_T0080275.1 MGP_WSBEiJ_G0030799.1 mouse_genomes_project 7 9666391 9671938 - MGP_WSBEiJ_P0080275 Zfp551 protein_coding protein_coding MGP_WSBEiJ_T0080276.1 MGP_WSBEiJ_G0030799.1 mouse_genomes_project 7 9666544 9671889 - Zfp551 protein_coding processed_transcript MGP_WSBEiJ_T0099724.1 MGP_WSBEiJ_G0038387.1 mouse_genomes_project 7 60614223 60614293 - Snord107 snoRNA snoRNA MGP_WSBEiJ_T0010721.1 MGP_WSBEiJ_G0008878.1 mouse_genomes_project 7 80994682 80994772 + Mir9-3 miRNA miRNA MGP_WSBEiJ_T0084660.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 118984169 119560444 - MGP_WSBEiJ_P0084660 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084661.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 118984641 119569533 - MGP_WSBEiJ_P0084661 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084662.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 118984641 119521690 - MGP_WSBEiJ_P0084662 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084663.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 118984641 119560444 - MGP_WSBEiJ_P0084663 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084664.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 118987753 119347604 - MGP_WSBEiJ_P0084664 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084665.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 118989955 119370501 - MGP_WSBEiJ_P0084665 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084666.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 118989955 119370536 - MGP_WSBEiJ_P0084666 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084667.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 118989968 119521690 - MGP_WSBEiJ_P0084667 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084668.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 119029614 119564381 - Sox6 protein_coding retained_intron MGP_WSBEiJ_T0084669.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 119030048 119112283 - Sox6 protein_coding processed_transcript MGP_WSBEiJ_T0084670.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 119057977 119569585 - Sox6 protein_coding retained_intron MGP_WSBEiJ_T0084671.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 119101927 119180419 - MGP_WSBEiJ_P0084671 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084672.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 119111616 119180419 - Sox6 protein_coding retained_intron MGP_WSBEiJ_T0084673.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 119304635 119384103 - MGP_WSBEiJ_P0084673 Sox6 protein_coding protein_coding MGP_WSBEiJ_T0084674.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 119330915 119565292 - Sox6 protein_coding processed_transcript MGP_WSBEiJ_T0084675.1 MGP_WSBEiJ_G0032026.1 mouse_genomes_project 7 119368567 119370547 - Sox6 protein_coding retained_intron MGP_WSBEiJ_T0079923.1 MGP_WSBEiJ_G0030690.1 mouse_genomes_project 7 503573 516072 + MGP_WSBEiJ_P0079923 Prpf31 protein_coding protein_coding MGP_WSBEiJ_T0079924.1 MGP_WSBEiJ_G0030690.1 mouse_genomes_project 7 503573 516073 + MGP_WSBEiJ_P0079924 Prpf31 protein_coding protein_coding MGP_WSBEiJ_T0079925.1 MGP_WSBEiJ_G0030690.1 mouse_genomes_project 7 503580 505010 + Prpf31 protein_coding retained_intron MGP_WSBEiJ_T0079926.1 MGP_WSBEiJ_G0030690.1 mouse_genomes_project 7 503647 510645 + MGP_WSBEiJ_P0079926 Prpf31 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079927.1 MGP_WSBEiJ_G0030690.1 mouse_genomes_project 7 504145 514816 + MGP_WSBEiJ_P0079927 Prpf31 protein_coding protein_coding MGP_WSBEiJ_T0079928.1 MGP_WSBEiJ_G0030690.1 mouse_genomes_project 7 509683 510645 + Prpf31 protein_coding retained_intron MGP_WSBEiJ_T0081849.1 MGP_WSBEiJ_G0031211.1 mouse_genomes_project 7 30239914 30241217 - MGP_WSBEiJ_P0081849 Scgb1b2 protein_coding protein_coding MGP_WSBEiJ_T0084056.1 MGP_WSBEiJ_G0031744.1 mouse_genomes_project 7 104844618 104857837 + MGP_WSBEiJ_P0084056 protein_coding protein_coding MGP_WSBEiJ_T0086263.1 MGP_WSBEiJ_G0032370.1 mouse_genomes_project 7 146310493 146316006 + MGP_WSBEiJ_P0086263 Pnpla2 protein_coding protein_coding MGP_WSBEiJ_T0086264.1 MGP_WSBEiJ_G0032370.1 mouse_genomes_project 7 146310501 146315355 + MGP_WSBEiJ_P0086264 Pnpla2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086265.1 MGP_WSBEiJ_G0032370.1 mouse_genomes_project 7 146310502 146315357 + MGP_WSBEiJ_P0086265 Pnpla2 protein_coding protein_coding MGP_WSBEiJ_T0086266.1 MGP_WSBEiJ_G0032370.1 mouse_genomes_project 7 146310514 146314201 + MGP_WSBEiJ_P0086266 Pnpla2 protein_coding protein_coding MGP_WSBEiJ_T0086267.1 MGP_WSBEiJ_G0032370.1 mouse_genomes_project 7 146310524 146315366 + MGP_WSBEiJ_P0086267 Pnpla2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086268.1 MGP_WSBEiJ_G0032370.1 mouse_genomes_project 7 146310902 146313446 + MGP_WSBEiJ_P0086268 Pnpla2 protein_coding protein_coding MGP_WSBEiJ_T0086269.1 MGP_WSBEiJ_G0032370.1 mouse_genomes_project 7 146312312 146313949 + MGP_WSBEiJ_P0086269 Pnpla2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098493.1 MGP_WSBEiJ_G0037156.1 mouse_genomes_project 7 90281489 90281553 - Gm24249 snRNA snRNA MGP_WSBEiJ_T0080472.1 MGP_WSBEiJ_G0030863.1 mouse_genomes_project 7 14373241 14376996 + MGP_WSBEiJ_P0080472 Ceacam9 protein_coding protein_coding MGP_WSBEiJ_T0080473.1 MGP_WSBEiJ_G0030863.1 mouse_genomes_project 7 14373270 14376078 + MGP_WSBEiJ_P0080473 Ceacam9 protein_coding protein_coding MGP_WSBEiJ_T0085702.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134416680 134518822 - MGP_WSBEiJ_P0085702 Fgfr2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0085703.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134416740 134523157 - MGP_WSBEiJ_P0085703 Fgfr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085704.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134416740 134523157 - MGP_WSBEiJ_P0085704 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085705.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134417836 134422113 - Fgfr2 protein_coding retained_intron MGP_WSBEiJ_T0085706.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134417937 134523175 - MGP_WSBEiJ_P0085706 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085707.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134417937 134523103 - MGP_WSBEiJ_P0085707 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085708.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418036 134426186 - Fgfr2 protein_coding retained_intron MGP_WSBEiJ_T0085709.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085709 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085710.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085710 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085711.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085711 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085712.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085712 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085713.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085713 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085714.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085714 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085715.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085715 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085716.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085716 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085717.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085717 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085718.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085718 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085719.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085719 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085720.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085720 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085721.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134418187 134518765 - MGP_WSBEiJ_P0085721 Fgfr2 protein_coding protein_coding MGP_WSBEiJ_T0085722.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134423974 134432335 - Fgfr2 protein_coding retained_intron MGP_WSBEiJ_T0085723.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134432050 134436656 - Fgfr2 protein_coding retained_intron MGP_WSBEiJ_T0085724.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134434330 134450760 - Fgfr2 protein_coding retained_intron MGP_WSBEiJ_T0085725.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134438789 134450272 - Fgfr2 protein_coding retained_intron MGP_WSBEiJ_T0085726.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134454594 134484715 - MGP_WSBEiJ_P0085726 Fgfr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085727.1 MGP_WSBEiJ_G0032228.1 mouse_genomes_project 7 134497918 134520888 - Fgfr2 protein_coding retained_intron MGP_WSBEiJ_T0010653.1 MGP_WSBEiJ_G0008810.1 mouse_genomes_project 7 99595 99677 + Mir294 miRNA miRNA MGP_WSBEiJ_T0080583.1 MGP_WSBEiJ_G0030899.1 mouse_genomes_project 7 16913804 16923722 - MGP_WSBEiJ_P0080583 Foxa3 protein_coding protein_coding MGP_WSBEiJ_T0082694.1 MGP_WSBEiJ_G0031429.1 mouse_genomes_project 7 47389304 47426400 - MGP_WSBEiJ_P0082694 Uevld protein_coding protein_coding MGP_WSBEiJ_T0010711.1 MGP_WSBEiJ_G0008868.1 mouse_genomes_project 7 62854008 62854076 - Mir344f miRNA miRNA MGP_WSBEiJ_T0017797.1 MGP_WSBEiJ_G0015101.1 mouse_genomes_project 7 86493489 86585947 + 2610206C17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017798.1 MGP_WSBEiJ_G0015101.1 mouse_genomes_project 7 86585100 86585418 + 2610206C17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0085693.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133817072 133861305 + MGP_WSBEiJ_P0085693 Wdr11 protein_coding protein_coding MGP_WSBEiJ_T0085694.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133817117 133851205 + Wdr11 protein_coding retained_intron MGP_WSBEiJ_T0085695.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133817127 133837847 + Wdr11 protein_coding retained_intron MGP_WSBEiJ_T0085696.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133818277 133858422 + MGP_WSBEiJ_P0085696 Wdr11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085697.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133830622 133833351 + Wdr11 protein_coding processed_transcript MGP_WSBEiJ_T0085698.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133832113 133861303 + Wdr11 protein_coding retained_intron MGP_WSBEiJ_T0085699.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133833349 133839597 + MGP_WSBEiJ_P0085699 Wdr11 protein_coding protein_coding MGP_WSBEiJ_T0085700.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133850620 133861301 + Wdr11 protein_coding retained_intron MGP_WSBEiJ_T0085701.1 MGP_WSBEiJ_G0032227.1 mouse_genomes_project 7 133854597 133859229 + MGP_WSBEiJ_P0085701 Wdr11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084460.1 MGP_WSBEiJ_G0031980.1 mouse_genomes_project 7 112692331 112765634 - MGP_WSBEiJ_P0084460 Trim66 protein_coding protein_coding MGP_WSBEiJ_T0084461.1 MGP_WSBEiJ_G0031980.1 mouse_genomes_project 7 112692811 112736210 - MGP_WSBEiJ_P0084461 Trim66 protein_coding protein_coding MGP_WSBEiJ_T0084462.1 MGP_WSBEiJ_G0031980.1 mouse_genomes_project 7 112708677 112714920 - Trim66 protein_coding processed_transcript MGP_WSBEiJ_T0005224.1 MGP_WSBEiJ_G0004430.1 mouse_genomes_project 7 136966211 136968448 + Gm16764 antisense antisense MGP_WSBEiJ_T0005225.1 MGP_WSBEiJ_G0004430.1 mouse_genomes_project 7 136966211 136968448 + Gm16764 antisense antisense MGP_WSBEiJ_T0005226.1 MGP_WSBEiJ_G0004430.1 mouse_genomes_project 7 136966227 136968448 + Gm16764 antisense antisense MGP_WSBEiJ_T0085907.1 MGP_WSBEiJ_G0032274.1 mouse_genomes_project 7 140178238 140207118 - MGP_WSBEiJ_P0085907 Mki67 protein_coding protein_coding MGP_WSBEiJ_T0082992.1 MGP_WSBEiJ_G0031503.1 mouse_genomes_project 7 67596005 67640950 - MGP_WSBEiJ_P0082992 Asb7 protein_coding protein_coding MGP_WSBEiJ_T0082993.1 MGP_WSBEiJ_G0031503.1 mouse_genomes_project 7 67596005 67640243 - MGP_WSBEiJ_P0082993 Asb7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082994.1 MGP_WSBEiJ_G0031503.1 mouse_genomes_project 7 67628456 67640828 - MGP_WSBEiJ_P0082994 Asb7 protein_coding protein_coding MGP_WSBEiJ_T0101034.1 MGP_WSBEiJ_G0039491.1 mouse_genomes_project 7 42302573 42302708 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005144.1 MGP_WSBEiJ_G0004373.1 mouse_genomes_project 7 73299050 73301746 + Gm45107 antisense antisense MGP_WSBEiJ_T0005073.1 MGP_WSBEiJ_G0004321.1 mouse_genomes_project 7 15834277 15953197 - antisense antisense MGP_WSBEiJ_T0005074.1 MGP_WSBEiJ_G0004321.1 mouse_genomes_project 7 15837611 15953241 - antisense antisense MGP_WSBEiJ_T0005210.1 MGP_WSBEiJ_G0004418.1 mouse_genomes_project 7 130685200 130686252 - 2510046G10Rik antisense antisense MGP_WSBEiJ_T0005211.1 MGP_WSBEiJ_G0004418.1 mouse_genomes_project 7 130685880 130686228 - 2510046G10Rik antisense antisense MGP_WSBEiJ_T0008762.1 MGP_WSBEiJ_G0007082.1 mouse_genomes_project 7 73856179 73856484 - Gm28745 lincRNA lincRNA MGP_WSBEiJ_T0084432.1 MGP_WSBEiJ_G0031965.1 mouse_genomes_project 7 111836656 111837731 - MGP_WSBEiJ_P0084432 Olfr509 protein_coding protein_coding MGP_WSBEiJ_T0082875.1 MGP_WSBEiJ_G0031481.1 mouse_genomes_project 7 63938252 64057084 - MGP_WSBEiJ_P0082875 Chrna7 protein_coding protein_coding MGP_WSBEiJ_T0084549.1 MGP_WSBEiJ_G0032002.1 mouse_genomes_project 7 114371457 114401835 + MGP_WSBEiJ_P0084549 Ctr9 protein_coding protein_coding MGP_WSBEiJ_T0084550.1 MGP_WSBEiJ_G0032002.1 mouse_genomes_project 7 114371501 114392045 + Ctr9 protein_coding retained_intron MGP_WSBEiJ_T0084551.1 MGP_WSBEiJ_G0032002.1 mouse_genomes_project 7 114371519 114373321 + Ctr9 protein_coding retained_intron MGP_WSBEiJ_T0084552.1 MGP_WSBEiJ_G0032002.1 mouse_genomes_project 7 114372721 114376568 + Ctr9 protein_coding processed_transcript MGP_WSBEiJ_T0084553.1 MGP_WSBEiJ_G0032002.1 mouse_genomes_project 7 114376547 114377892 + Ctr9 protein_coding retained_intron MGP_WSBEiJ_T0084554.1 MGP_WSBEiJ_G0032002.1 mouse_genomes_project 7 114390703 114391216 + Ctr9 protein_coding retained_intron MGP_WSBEiJ_T0084555.1 MGP_WSBEiJ_G0032002.1 mouse_genomes_project 7 114390703 114392365 + Ctr9 protein_coding retained_intron MGP_WSBEiJ_T0084556.1 MGP_WSBEiJ_G0032002.1 mouse_genomes_project 7 114395378 114397902 + Ctr9 protein_coding processed_transcript MGP_WSBEiJ_T0080404.1 MGP_WSBEiJ_G0030843.1 mouse_genomes_project 7 13503761 13513558 - MGP_WSBEiJ_P0080404 Gltscr2 protein_coding protein_coding MGP_WSBEiJ_T0080405.1 MGP_WSBEiJ_G0030843.1 mouse_genomes_project 7 13505368 13513255 - Gltscr2 protein_coding retained_intron MGP_WSBEiJ_T0080406.1 MGP_WSBEiJ_G0030843.1 mouse_genomes_project 7 13510351 13513560 - Gltscr2 protein_coding processed_transcript MGP_WSBEiJ_T0081734.1 MGP_WSBEiJ_G0031194.1 mouse_genomes_project 7 29722593 29724442 - MGP_WSBEiJ_P0081734 Ffar3 protein_coding protein_coding MGP_WSBEiJ_T0081735.1 MGP_WSBEiJ_G0031194.1 mouse_genomes_project 7 29723197 29724431 - MGP_WSBEiJ_P0081735 Ffar3 protein_coding protein_coding MGP_WSBEiJ_T0084135.1 MGP_WSBEiJ_G0031790.1 mouse_genomes_project 7 105961987 105964823 + MGP_WSBEiJ_P0084135 Olfr592 protein_coding protein_coding MGP_WSBEiJ_T0084136.1 MGP_WSBEiJ_G0031790.1 mouse_genomes_project 7 105963884 105964823 + MGP_WSBEiJ_P0084136 Olfr592 protein_coding protein_coding MGP_WSBEiJ_T0081761.1 MGP_WSBEiJ_G0031198.1 mouse_genomes_project 7 29794340 29818449 - MGP_WSBEiJ_P0081761 protein_coding protein_coding MGP_WSBEiJ_T0081031.1 MGP_WSBEiJ_G0031022.1 mouse_genomes_project 7 24007691 24013718 - MGP_WSBEiJ_P0081031 Tmem91 protein_coding protein_coding MGP_WSBEiJ_T0081032.1 MGP_WSBEiJ_G0031022.1 mouse_genomes_project 7 24007694 24012025 - MGP_WSBEiJ_P0081032 Tmem91 protein_coding protein_coding MGP_WSBEiJ_T0081033.1 MGP_WSBEiJ_G0031022.1 mouse_genomes_project 7 24007794 24013642 - MGP_WSBEiJ_P0081033 Tmem91 protein_coding protein_coding MGP_WSBEiJ_T0081034.1 MGP_WSBEiJ_G0031022.1 mouse_genomes_project 7 24007794 24013599 - MGP_WSBEiJ_P0081034 Tmem91 protein_coding protein_coding MGP_WSBEiJ_T0081035.1 MGP_WSBEiJ_G0031022.1 mouse_genomes_project 7 24008597 24013671 - Tmem91 protein_coding retained_intron MGP_WSBEiJ_T0081036.1 MGP_WSBEiJ_G0031022.1 mouse_genomes_project 7 24009748 24013670 - Tmem91 protein_coding retained_intron MGP_WSBEiJ_T0005096.1 MGP_WSBEiJ_G0004336.1 mouse_genomes_project 7 25619113 25625118 - Gm15883 antisense antisense MGP_WSBEiJ_T0083481.1 MGP_WSBEiJ_G0031594.1 mouse_genomes_project 7 84615699 84619932 + MGP_WSBEiJ_P0083481 Mex3b protein_coding protein_coding MGP_WSBEiJ_T0084363.1 MGP_WSBEiJ_G0031908.1 mouse_genomes_project 7 108703908 108708333 - MGP_WSBEiJ_P0084363 Mrpl17 protein_coding protein_coding MGP_WSBEiJ_T0084364.1 MGP_WSBEiJ_G0031908.1 mouse_genomes_project 7 108706916 108708197 - MGP_WSBEiJ_P0084364 Mrpl17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084365.1 MGP_WSBEiJ_G0031908.1 mouse_genomes_project 7 108706939 108708235 - Mrpl17 protein_coding retained_intron MGP_WSBEiJ_T0084366.1 MGP_WSBEiJ_G0031908.1 mouse_genomes_project 7 108707024 108708238 - Mrpl17 protein_coding processed_transcript MGP_WSBEiJ_T0084367.1 MGP_WSBEiJ_G0031908.1 mouse_genomes_project 7 108707380 108708267 - MGP_WSBEiJ_P0084367 Mrpl17 protein_coding protein_coding MGP_WSBEiJ_T0008739.1 MGP_WSBEiJ_G0007065.1 mouse_genomes_project 7 66487994 66543424 - lincRNA lincRNA MGP_WSBEiJ_T0084368.1 MGP_WSBEiJ_G0031909.1 mouse_genomes_project 7 109308058 109308731 - MGP_WSBEiJ_P0084368 protein_coding protein_coding MGP_WSBEiJ_T0083886.1 MGP_WSBEiJ_G0031716.1 mouse_genomes_project 7 103188771 103192052 + MGP_WSBEiJ_P0083886 Coa4 protein_coding protein_coding MGP_WSBEiJ_T0083887.1 MGP_WSBEiJ_G0031716.1 mouse_genomes_project 7 103188903 103191155 + MGP_WSBEiJ_P0083887 Coa4 protein_coding protein_coding MGP_WSBEiJ_T0082872.1 MGP_WSBEiJ_G0031478.1 mouse_genomes_project 7 63219384 63223956 + MGP_WSBEiJ_P0082872 Magel2 protein_coding protein_coding MGP_WSBEiJ_T0081274.1 MGP_WSBEiJ_G0031088.1 mouse_genomes_project 7 26926002 26951220 - MGP_WSBEiJ_P0081274 Supt5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081275.1 MGP_WSBEiJ_G0031088.1 mouse_genomes_project 7 26926011 26951175 - MGP_WSBEiJ_P0081275 Supt5 protein_coding protein_coding MGP_WSBEiJ_T0101022.1 MGP_WSBEiJ_G0039479.1 mouse_genomes_project 7 33076590 33078353 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080393.1 MGP_WSBEiJ_G0030840.1 mouse_genomes_project 7 13425211 13442667 - MGP_WSBEiJ_P0080393 Crx protein_coding protein_coding MGP_WSBEiJ_T0080394.1 MGP_WSBEiJ_G0030840.1 mouse_genomes_project 7 13425212 13431954 - MGP_WSBEiJ_P0080394 Crx protein_coding protein_coding MGP_WSBEiJ_T0080395.1 MGP_WSBEiJ_G0030840.1 mouse_genomes_project 7 13426490 13442571 - Crx protein_coding processed_transcript MGP_WSBEiJ_T0080396.1 MGP_WSBEiJ_G0030840.1 mouse_genomes_project 7 13426490 13442543 - MGP_WSBEiJ_P0080396 Crx protein_coding protein_coding MGP_WSBEiJ_T0080397.1 MGP_WSBEiJ_G0030840.1 mouse_genomes_project 7 13427320 13430998 - MGP_WSBEiJ_P0080397 Crx protein_coding protein_coding MGP_WSBEiJ_T0081854.1 MGP_WSBEiJ_G0031216.1 mouse_genomes_project 7 33258776 33260732 - MGP_WSBEiJ_P0081854 Scgb2b27 protein_coding protein_coding MGP_WSBEiJ_T0081856.1 MGP_WSBEiJ_G0031216.1 mouse_genomes_project 7 33258787 33260798 - Scgb2b27 protein_coding retained_intron MGP_WSBEiJ_T0081857.1 MGP_WSBEiJ_G0031216.1 mouse_genomes_project 7 33258825 33260723 - MGP_WSBEiJ_P0081857 Scgb2b27 protein_coding protein_coding MGP_WSBEiJ_T0084251.1 MGP_WSBEiJ_G0031877.1 mouse_genomes_project 7 107948935 107949874 + MGP_WSBEiJ_P0084251 Olfr677 protein_coding protein_coding MGP_WSBEiJ_T0100321.1 MGP_WSBEiJ_G0038815.1 mouse_genomes_project 7 28334102 28363809 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100322.1 MGP_WSBEiJ_G0038815.1 mouse_genomes_project 7 28336038 28357451 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0084260.1 MGP_WSBEiJ_G0031886.1 mouse_genomes_project 7 108182545 108183621 + MGP_WSBEiJ_P0084260 Olfr689 protein_coding protein_coding MGP_WSBEiJ_T0085114.1 MGP_WSBEiJ_G0032121.1 mouse_genomes_project 7 130512658 130516026 + MGP_WSBEiJ_P0085114 Tufm protein_coding protein_coding MGP_WSBEiJ_T0085116.1 MGP_WSBEiJ_G0032121.1 mouse_genomes_project 7 130512675 130516030 + MGP_WSBEiJ_P0085116 Tufm protein_coding protein_coding MGP_WSBEiJ_T0085117.1 MGP_WSBEiJ_G0032121.1 mouse_genomes_project 7 130512926 130514244 + Tufm protein_coding processed_transcript MGP_WSBEiJ_T0085118.1 MGP_WSBEiJ_G0032121.1 mouse_genomes_project 7 130513911 130514431 + Tufm protein_coding retained_intron MGP_WSBEiJ_T0085119.1 MGP_WSBEiJ_G0032121.1 mouse_genomes_project 7 130514668 130515528 + MGP_WSBEiJ_P0085119 Tufm protein_coding protein_coding MGP_WSBEiJ_T0085381.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131284913 131288834 - MGP_WSBEiJ_P0085381 Sept1 protein_coding protein_coding MGP_WSBEiJ_T0085382.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131284918 131285596 - Sept1 protein_coding retained_intron MGP_WSBEiJ_T0085383.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131285241 131288896 - MGP_WSBEiJ_P0085383 Sept1 protein_coding protein_coding MGP_WSBEiJ_T0085384.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131285436 131287464 - Sept1 protein_coding retained_intron MGP_WSBEiJ_T0085385.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131286355 131288815 - MGP_WSBEiJ_P0085385 Sept1 protein_coding protein_coding MGP_WSBEiJ_T0085386.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131287152 131305394 - MGP_WSBEiJ_P0085386 Sept1 protein_coding protein_coding MGP_WSBEiJ_T0085387.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131287189 131288851 - Sept1 protein_coding retained_intron MGP_WSBEiJ_T0085388.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131287396 131288656 - Sept1 protein_coding processed_transcript MGP_WSBEiJ_T0085389.1 MGP_WSBEiJ_G0032165.1 mouse_genomes_project 7 131305169 131305878 - Sept1 protein_coding retained_intron MGP_WSBEiJ_T0085901.1 MGP_WSBEiJ_G0032268.1 mouse_genomes_project 7 139351070 139406966 - MGP_WSBEiJ_P0085901 Fam196a protein_coding protein_coding MGP_WSBEiJ_T0015394.1 MGP_WSBEiJ_G0013524.1 mouse_genomes_project 7 120057324 120057612 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084429.1 MGP_WSBEiJ_G0031962.1 mouse_genomes_project 7 111802506 111803514 + MGP_WSBEiJ_P0084429 Olfr506 protein_coding protein_coding MGP_WSBEiJ_T0084993.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127176753 127267961 - MGP_WSBEiJ_P0084993 Arhgap17 protein_coding protein_coding MGP_WSBEiJ_T0084994.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127176806 127267996 - MGP_WSBEiJ_P0084994 Arhgap17 protein_coding protein_coding MGP_WSBEiJ_T0084995.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127176806 127267996 - MGP_WSBEiJ_P0084995 Arhgap17 protein_coding protein_coding MGP_WSBEiJ_T0084996.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127176810 127267988 - MGP_WSBEiJ_P0084996 Arhgap17 protein_coding protein_coding MGP_WSBEiJ_T0084997.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127176815 127268013 - MGP_WSBEiJ_P0084997 Arhgap17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084998.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127176920 127267995 - MGP_WSBEiJ_P0084998 Arhgap17 protein_coding protein_coding MGP_WSBEiJ_T0084999.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127180472 127183777 - Arhgap17 protein_coding retained_intron MGP_WSBEiJ_T0085000.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127184521 127194126 - Arhgap17 protein_coding retained_intron MGP_WSBEiJ_T0085001.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127192814 127268025 - Arhgap17 protein_coding retained_intron MGP_WSBEiJ_T0085002.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127218915 127268025 - MGP_WSBEiJ_P0085002 Arhgap17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085003.1 MGP_WSBEiJ_G0032100.1 mouse_genomes_project 7 127266875 127267986 - Arhgap17 protein_coding retained_intron MGP_WSBEiJ_T0008730.1 MGP_WSBEiJ_G0007058.1 mouse_genomes_project 7 61899144 62096950 - lincRNA lincRNA MGP_WSBEiJ_T0082881.1 MGP_WSBEiJ_G0031483.1 mouse_genomes_project 7 64751785 64813138 - MGP_WSBEiJ_P0082881 Klf13 protein_coding protein_coding MGP_WSBEiJ_T0082882.1 MGP_WSBEiJ_G0031483.1 mouse_genomes_project 7 64756840 64810521 - MGP_WSBEiJ_P0082882 Klf13 protein_coding protein_coding MGP_WSBEiJ_T0082883.1 MGP_WSBEiJ_G0031483.1 mouse_genomes_project 7 64756857 64798088 - MGP_WSBEiJ_P0082883 Klf13 protein_coding protein_coding MGP_WSBEiJ_T0082885.1 MGP_WSBEiJ_G0031483.1 mouse_genomes_project 7 64809618 64810552 - Klf13 protein_coding retained_intron MGP_WSBEiJ_T0083409.1 MGP_WSBEiJ_G0031575.1 mouse_genomes_project 7 82757475 82814100 + MGP_WSBEiJ_P0083409 Slc28a1 protein_coding protein_coding MGP_WSBEiJ_T0083410.1 MGP_WSBEiJ_G0031575.1 mouse_genomes_project 7 82757530 82814100 + MGP_WSBEiJ_P0083410 Slc28a1 protein_coding protein_coding MGP_WSBEiJ_T0079957.1 MGP_WSBEiJ_G0030695.1 mouse_genomes_project 7 569159 571110 + MGP_WSBEiJ_P0079957 protein_coding protein_coding MGP_WSBEiJ_T0079958.1 MGP_WSBEiJ_G0030695.1 mouse_genomes_project 7 569898 571490 + MGP_WSBEiJ_P0079958 protein_coding protein_coding MGP_WSBEiJ_T0079959.1 MGP_WSBEiJ_G0030695.1 mouse_genomes_project 7 570097 571929 + protein_coding retained_intron MGP_WSBEiJ_T0079960.1 MGP_WSBEiJ_G0030695.1 mouse_genomes_project 7 570125 571513 + MGP_WSBEiJ_P0079960 protein_coding protein_coding MGP_WSBEiJ_T0079961.1 MGP_WSBEiJ_G0030695.1 mouse_genomes_project 7 570594 571397 + MGP_WSBEiJ_P0079961 protein_coding protein_coding MGP_WSBEiJ_T0079962.1 MGP_WSBEiJ_G0030695.1 mouse_genomes_project 7 570804 576752 + MGP_WSBEiJ_P0079962 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079963.1 MGP_WSBEiJ_G0030695.1 mouse_genomes_project 7 571492 576752 + MGP_WSBEiJ_P0079963 protein_coding protein_coding MGP_WSBEiJ_T0083800.1 MGP_WSBEiJ_G0031693.1 mouse_genomes_project 7 101938664 102019934 + MGP_WSBEiJ_P0083800 Gdpd5 protein_coding protein_coding MGP_WSBEiJ_T0101070.1 MGP_WSBEiJ_G0039527.1 mouse_genomes_project 7 86690752 86693518 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100985.1 MGP_WSBEiJ_G0039442.1 mouse_genomes_project 7 11774774 11778027 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0079896.1 MGP_WSBEiJ_G0030683.1 mouse_genomes_project 7 228681 268060 + MGP_WSBEiJ_P0079896 Cacng7 protein_coding protein_coding MGP_WSBEiJ_T0079897.1 MGP_WSBEiJ_G0030683.1 mouse_genomes_project 7 234789 266822 + Cacng7 protein_coding retained_intron MGP_WSBEiJ_T0008768.1 MGP_WSBEiJ_G0007088.1 mouse_genomes_project 7 74379731 74383005 + Gm44670 lincRNA lincRNA MGP_WSBEiJ_T0008769.1 MGP_WSBEiJ_G0007088.1 mouse_genomes_project 7 74379790 74383436 + Gm44670 lincRNA lincRNA MGP_WSBEiJ_T0083846.1 MGP_WSBEiJ_G0031708.1 mouse_genomes_project 7 102807121 102815341 + MGP_WSBEiJ_P0083846 Kcne3 protein_coding protein_coding MGP_WSBEiJ_T0083847.1 MGP_WSBEiJ_G0031708.1 mouse_genomes_project 7 102809158 102815341 + MGP_WSBEiJ_P0083847 Kcne3 protein_coding protein_coding MGP_WSBEiJ_T0083848.1 MGP_WSBEiJ_G0031708.1 mouse_genomes_project 7 102809158 102815341 + MGP_WSBEiJ_P0083848 Kcne3 protein_coding protein_coding MGP_WSBEiJ_T0083849.1 MGP_WSBEiJ_G0031708.1 mouse_genomes_project 7 102809158 102815341 + MGP_WSBEiJ_P0083849 Kcne3 protein_coding protein_coding MGP_WSBEiJ_T0082937.1 MGP_WSBEiJ_G0031493.1 mouse_genomes_project 7 66203108 66279310 - MGP_WSBEiJ_P0082937 Tjp1 protein_coding protein_coding MGP_WSBEiJ_T0082938.1 MGP_WSBEiJ_G0031493.1 mouse_genomes_project 7 66203651 66279086 - MGP_WSBEiJ_P0082938 Tjp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082939.1 MGP_WSBEiJ_G0031493.1 mouse_genomes_project 7 66203651 66279086 - MGP_WSBEiJ_P0082939 Tjp1 protein_coding protein_coding MGP_WSBEiJ_T0082940.1 MGP_WSBEiJ_G0031493.1 mouse_genomes_project 7 66204447 66209454 - Tjp1 protein_coding processed_transcript MGP_WSBEiJ_T0082941.1 MGP_WSBEiJ_G0031493.1 mouse_genomes_project 7 66247805 66250380 - Tjp1 protein_coding retained_intron MGP_WSBEiJ_T0082942.1 MGP_WSBEiJ_G0031493.1 mouse_genomes_project 7 66250199 66436028 - MGP_WSBEiJ_P0082942 Tjp1 protein_coding protein_coding MGP_WSBEiJ_T0082943.1 MGP_WSBEiJ_G0031493.1 mouse_genomes_project 7 66421427 66436113 - Tjp1 protein_coding retained_intron MGP_WSBEiJ_T0098499.1 MGP_WSBEiJ_G0037162.1 mouse_genomes_project 7 101014461 101014625 + Gm23040 snRNA snRNA MGP_WSBEiJ_T0002185.1 MGP_WSBEiJ_G0002104.1 mouse_genomes_project 7 50195005 50196996 + TEC TEC MGP_WSBEiJ_T0086043.1 MGP_WSBEiJ_G0032314.1 mouse_genomes_project 7 145079052 145081244 - MGP_WSBEiJ_P0086043 Olfr530 protein_coding protein_coding MGP_WSBEiJ_T0081041.1 MGP_WSBEiJ_G0031024.1 mouse_genomes_project 7 24025661 24050405 + MGP_WSBEiJ_P0081041 Tgfb1 protein_coding protein_coding MGP_WSBEiJ_T0081042.1 MGP_WSBEiJ_G0031024.1 mouse_genomes_project 7 24026807 24027384 + Tgfb1 protein_coding processed_transcript MGP_WSBEiJ_T0081043.1 MGP_WSBEiJ_G0031024.1 mouse_genomes_project 7 24027549 24030131 + Tgfb1 protein_coding retained_intron MGP_WSBEiJ_T0081044.1 MGP_WSBEiJ_G0031024.1 mouse_genomes_project 7 24027586 24037496 + MGP_WSBEiJ_P0081044 Tgfb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081045.1 MGP_WSBEiJ_G0031024.1 mouse_genomes_project 7 24032696 24037457 + Tgfb1 protein_coding retained_intron MGP_WSBEiJ_T0084235.1 MGP_WSBEiJ_G0031861.1 mouse_genomes_project 7 107395002 107396028 + MGP_WSBEiJ_P0084235 Olfr654 protein_coding protein_coding MGP_WSBEiJ_T0085900.1 MGP_WSBEiJ_G0032267.1 mouse_genomes_project 7 139129781 139646125 + MGP_WSBEiJ_P0085900 Dock1 protein_coding protein_coding MGP_WSBEiJ_T0083526.1 MGP_WSBEiJ_G0031612.1 mouse_genomes_project 7 87036820 87550487 - MGP_WSBEiJ_P0083526 Vmn2r70 protein_coding protein_coding MGP_WSBEiJ_T0015212.1 MGP_WSBEiJ_G0013342.1 mouse_genomes_project 7 1529669 1530421 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015296.1 MGP_WSBEiJ_G0013426.1 mouse_genomes_project 7 43180844 43181380 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015360.1 MGP_WSBEiJ_G0013490.1 mouse_genomes_project 7 97032504 97032895 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080557.1 MGP_WSBEiJ_G0030887.1 mouse_genomes_project 7 16343045 16345600 - MGP_WSBEiJ_P0080557 protein_coding protein_coding MGP_WSBEiJ_T0081926.1 MGP_WSBEiJ_G0031230.1 mouse_genomes_project 7 34386630 34396778 - MGP_WSBEiJ_P0081926 Cebpg protein_coding protein_coding MGP_WSBEiJ_T0081927.1 MGP_WSBEiJ_G0031230.1 mouse_genomes_project 7 34390104 34391714 - Cebpg protein_coding retained_intron MGP_WSBEiJ_T0081928.1 MGP_WSBEiJ_G0031230.1 mouse_genomes_project 7 34390523 34396145 - MGP_WSBEiJ_P0081928 Cebpg protein_coding protein_coding MGP_WSBEiJ_T0081929.1 MGP_WSBEiJ_G0031230.1 mouse_genomes_project 7 34391073 34396188 - Cebpg protein_coding processed_transcript MGP_WSBEiJ_T0084253.1 MGP_WSBEiJ_G0031879.1 mouse_genomes_project 7 107979010 107979962 + MGP_WSBEiJ_P0084253 protein_coding protein_coding MGP_WSBEiJ_T0084506.1 MGP_WSBEiJ_G0031994.1 mouse_genomes_project 7 113423274 113444190 + MGP_WSBEiJ_P0084506 Wee1 protein_coding protein_coding MGP_WSBEiJ_T0083540.1 MGP_WSBEiJ_G0031625.1 mouse_genomes_project 7 88767365 88768632 - MGP_WSBEiJ_P0083540 Olfr294 protein_coding protein_coding MGP_WSBEiJ_T0086066.1 MGP_WSBEiJ_G0032332.1 mouse_genomes_project 7 145624268 145627464 + MGP_WSBEiJ_P0086066 Odf3 protein_coding protein_coding MGP_WSBEiJ_T0086067.1 MGP_WSBEiJ_G0032332.1 mouse_genomes_project 7 145624286 145627454 + MGP_WSBEiJ_P0086067 Odf3 protein_coding protein_coding MGP_WSBEiJ_T0086068.1 MGP_WSBEiJ_G0032332.1 mouse_genomes_project 7 145624287 145627457 + Odf3 protein_coding retained_intron MGP_WSBEiJ_T0085765.1 MGP_WSBEiJ_G0032237.1 mouse_genomes_project 7 135622524 135637181 - MGP_WSBEiJ_P0085765 Cuzd1 protein_coding protein_coding MGP_WSBEiJ_T0002279.1 MGP_WSBEiJ_G0002197.1 mouse_genomes_project 7 148353015 148356507 - TEC TEC MGP_WSBEiJ_T0005063.1 MGP_WSBEiJ_G0004316.1 mouse_genomes_project 7 1359060 1383903 - Gm15494 antisense antisense MGP_WSBEiJ_T0005064.1 MGP_WSBEiJ_G0004316.1 mouse_genomes_project 7 1361556 1383939 - Gm15494 antisense antisense MGP_WSBEiJ_T0008781.1 MGP_WSBEiJ_G0007098.1 mouse_genomes_project 7 76135753 76166125 - 0610006L08Rik lincRNA lincRNA MGP_WSBEiJ_T0008782.1 MGP_WSBEiJ_G0007098.1 mouse_genomes_project 7 76140540 76166122 - 0610006L08Rik lincRNA lincRNA MGP_WSBEiJ_T0010748.1 MGP_WSBEiJ_G0008905.1 mouse_genomes_project 7 144647346 144647403 - Mir7686 miRNA miRNA MGP_WSBEiJ_T0082161.1 MGP_WSBEiJ_G0031290.1 mouse_genomes_project 7 43962220 43968214 + MGP_WSBEiJ_P0082161 Klk11 protein_coding protein_coding MGP_WSBEiJ_T0082162.1 MGP_WSBEiJ_G0031290.1 mouse_genomes_project 7 43965279 43967904 + Klk11 protein_coding retained_intron MGP_WSBEiJ_T0082163.1 MGP_WSBEiJ_G0031290.1 mouse_genomes_project 7 43965279 43968209 + MGP_WSBEiJ_P0082163 Klk11 protein_coding protein_coding MGP_WSBEiJ_T0082164.1 MGP_WSBEiJ_G0031290.1 mouse_genomes_project 7 43965430 43968011 + Klk11 protein_coding processed_transcript MGP_WSBEiJ_T0082165.1 MGP_WSBEiJ_G0031290.1 mouse_genomes_project 7 43965430 43968011 + Klk11 protein_coding processed_transcript MGP_WSBEiJ_T0002180.1 MGP_WSBEiJ_G0002099.1 mouse_genomes_project 7 43901775 43902209 + TEC TEC MGP_WSBEiJ_T0085873.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138132541 138190228 - MGP_WSBEiJ_P0085873 Dhx32 protein_coding protein_coding MGP_WSBEiJ_T0085874.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138132545 138173891 - Dhx32 protein_coding processed_transcript MGP_WSBEiJ_T0085875.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138132647 138190126 - MGP_WSBEiJ_P0085875 Dhx32 protein_coding protein_coding MGP_WSBEiJ_T0085876.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138132709 138196613 - MGP_WSBEiJ_P0085876 Dhx32 protein_coding protein_coding MGP_WSBEiJ_T0085877.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138134643 138142455 - Dhx32 protein_coding processed_transcript MGP_WSBEiJ_T0085878.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138162233 138173094 - Dhx32 protein_coding processed_transcript MGP_WSBEiJ_T0085879.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138162533 138173451 - MGP_WSBEiJ_P0085879 Dhx32 protein_coding protein_coding MGP_WSBEiJ_T0085880.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138162678 138190112 - MGP_WSBEiJ_P0085880 Dhx32 protein_coding protein_coding MGP_WSBEiJ_T0085881.1 MGP_WSBEiJ_G0032263.1 mouse_genomes_project 7 138173299 138189934 - MGP_WSBEiJ_P0085881 Dhx32 protein_coding protein_coding MGP_WSBEiJ_T0086023.1 MGP_WSBEiJ_G0032303.1 mouse_genomes_project 7 144814212 144824364 + MGP_WSBEiJ_P0086023 Paox protein_coding protein_coding MGP_WSBEiJ_T0086024.1 MGP_WSBEiJ_G0032303.1 mouse_genomes_project 7 144816174 144822864 + MGP_WSBEiJ_P0086024 Paox protein_coding unknown_likely_coding MGP_WSBEiJ_T0010661.1 MGP_WSBEiJ_G0008818.1 mouse_genomes_project 7 17100474 17100572 + Mir330 miRNA miRNA MGP_WSBEiJ_T0083039.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68621450 68648630 + Ttc23 protein_coding retained_intron MGP_WSBEiJ_T0083040.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68621450 68706722 + MGP_WSBEiJ_P0083040 Ttc23 protein_coding protein_coding MGP_WSBEiJ_T0083041.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68621465 68706724 + MGP_WSBEiJ_P0083041 Ttc23 protein_coding protein_coding MGP_WSBEiJ_T0083042.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68621490 68706724 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0083043.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68621494 68623236 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0083044.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68621500 68635369 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0083045.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68623198 68658043 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0083046.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68629233 68658293 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0083047.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68629503 68706721 + MGP_WSBEiJ_P0083047 Ttc23 protein_coding protein_coding MGP_WSBEiJ_T0083048.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68635507 68710198 + MGP_WSBEiJ_P0083048 Ttc23 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083049.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68641538 68646037 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0083050.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68646055 68677699 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0083051.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68658266 68706200 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0083052.1 MGP_WSBEiJ_G0031510.1 mouse_genomes_project 7 68705405 68706162 + Ttc23 protein_coding processed_transcript MGP_WSBEiJ_T0008904.1 MGP_WSBEiJ_G0007173.1 mouse_genomes_project 7 139664036 139668076 - 1700120G07Rik lincRNA lincRNA MGP_WSBEiJ_T0008905.1 MGP_WSBEiJ_G0007173.1 mouse_genomes_project 7 139665198 139668076 - 1700120G07Rik lincRNA lincRNA MGP_WSBEiJ_T0086159.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146066392 146101699 + MGP_WSBEiJ_P0086159 Phrf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086160.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146066397 146101583 + MGP_WSBEiJ_P0086160 Phrf1 protein_coding protein_coding MGP_WSBEiJ_T0086161.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146071750 146084935 + MGP_WSBEiJ_P0086161 Phrf1 protein_coding protein_coding MGP_WSBEiJ_T0086162.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146081116 146101552 + MGP_WSBEiJ_P0086162 Phrf1 protein_coding protein_coding MGP_WSBEiJ_T0086163.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146093752 146097026 + Phrf1 protein_coding processed_transcript MGP_WSBEiJ_T0086164.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146094959 146096786 + Phrf1 protein_coding retained_intron MGP_WSBEiJ_T0086165.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146094960 146095843 + Phrf1 protein_coding retained_intron MGP_WSBEiJ_T0086166.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146098146 146101707 + MGP_WSBEiJ_P0086166 Phrf1 protein_coding protein_coding MGP_WSBEiJ_T0086167.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146098614 146099544 + Phrf1 protein_coding processed_transcript MGP_WSBEiJ_T0086168.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146099353 146101704 + MGP_WSBEiJ_P0086168 Phrf1 protein_coding protein_coding MGP_WSBEiJ_T0086169.1 MGP_WSBEiJ_G0032356.1 mouse_genomes_project 7 146100635 146101657 + Phrf1 protein_coding processed_transcript MGP_WSBEiJ_T0083237.1 MGP_WSBEiJ_G0031547.1 mouse_genomes_project 7 81315407 81318120 + MGP_WSBEiJ_P0083237 Mesp2 protein_coding protein_coding MGP_WSBEiJ_T0082540.1 MGP_WSBEiJ_G0031391.1 mouse_genomes_project 7 46047285 46057814 + MGP_WSBEiJ_P0082540 Ntn5 protein_coding protein_coding MGP_WSBEiJ_T0082541.1 MGP_WSBEiJ_G0031391.1 mouse_genomes_project 7 46047647 46057817 + MGP_WSBEiJ_P0082541 Ntn5 protein_coding protein_coding MGP_WSBEiJ_T0082542.1 MGP_WSBEiJ_G0031391.1 mouse_genomes_project 7 46047660 46057688 + MGP_WSBEiJ_P0082542 Ntn5 protein_coding protein_coding MGP_WSBEiJ_T0101117.1 MGP_WSBEiJ_G0039574.1 mouse_genomes_project 7 107983934 107986005 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080148.1 MGP_WSBEiJ_G0030730.1 mouse_genomes_project 7 1865996 1872781 + MGP_WSBEiJ_P0080148 Zfp628 protein_coding protein_coding MGP_WSBEiJ_T0080131.1 MGP_WSBEiJ_G0030725.1 mouse_genomes_project 7 1727915 1731657 + MGP_WSBEiJ_P0080131 Rpl28 protein_coding protein_coding MGP_WSBEiJ_T0080132.1 MGP_WSBEiJ_G0030725.1 mouse_genomes_project 7 1728031 1731117 + MGP_WSBEiJ_P0080132 Rpl28 protein_coding protein_coding MGP_WSBEiJ_T0080133.1 MGP_WSBEiJ_G0030725.1 mouse_genomes_project 7 1729989 1730417 + Rpl28 protein_coding retained_intron MGP_WSBEiJ_T0080134.1 MGP_WSBEiJ_G0030725.1 mouse_genomes_project 7 1730185 1731153 + MGP_WSBEiJ_P0080134 Rpl28 protein_coding protein_coding MGP_WSBEiJ_T0080135.1 MGP_WSBEiJ_G0030725.1 mouse_genomes_project 7 1730442 1731153 + Rpl28 protein_coding retained_intron MGP_WSBEiJ_T0084225.1 MGP_WSBEiJ_G0031856.1 mouse_genomes_project 7 107227774 107255616 - MGP_WSBEiJ_P0084225 Trim30a protein_coding unknown_likely_coding MGP_WSBEiJ_T0084226.1 MGP_WSBEiJ_G0031856.1 mouse_genomes_project 7 107230094 107231371 - Trim30a protein_coding retained_intron MGP_WSBEiJ_T0084227.1 MGP_WSBEiJ_G0031856.1 mouse_genomes_project 7 107230119 107231065 - Trim30a protein_coding processed_transcript MGP_WSBEiJ_T0084228.1 MGP_WSBEiJ_G0031856.1 mouse_genomes_project 7 107230434 107231017 - Trim30a protein_coding retained_intron MGP_WSBEiJ_T0002202.1 MGP_WSBEiJ_G0002121.1 mouse_genomes_project 7 65388791 65389396 + TEC TEC MGP_WSBEiJ_T0083484.1 MGP_WSBEiJ_G0031597.1 mouse_genomes_project 7 85365096 85398242 + Tmc3 protein_coding retained_intron MGP_WSBEiJ_T0083485.1 MGP_WSBEiJ_G0031597.1 mouse_genomes_project 7 85365100 85372000 + Tmc3 protein_coding retained_intron MGP_WSBEiJ_T0083486.1 MGP_WSBEiJ_G0031597.1 mouse_genomes_project 7 85365100 85405744 + MGP_WSBEiJ_P0083486 Tmc3 protein_coding protein_coding MGP_WSBEiJ_T0083487.1 MGP_WSBEiJ_G0031597.1 mouse_genomes_project 7 85365261 85403082 + MGP_WSBEiJ_P0083487 Tmc3 protein_coding protein_coding MGP_WSBEiJ_T0083488.1 MGP_WSBEiJ_G0031597.1 mouse_genomes_project 7 85377660 85379034 + Tmc3 protein_coding retained_intron MGP_WSBEiJ_T0015222.1 MGP_WSBEiJ_G0013352.1 mouse_genomes_project 7 10006130 10007117 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010707.1 MGP_WSBEiJ_G0008864.1 mouse_genomes_project 7 62634903 62634995 - Mir344c miRNA miRNA MGP_WSBEiJ_T0082380.1 MGP_WSBEiJ_G0031347.1 mouse_genomes_project 7 45322177 45350986 - MGP_WSBEiJ_P0082380 Prr12 protein_coding protein_coding MGP_WSBEiJ_T0084263.1 MGP_WSBEiJ_G0031889.1 mouse_genomes_project 7 108208821 108209790 - MGP_WSBEiJ_P0084263 Olfr691 protein_coding protein_coding MGP_WSBEiJ_T0085203.1 MGP_WSBEiJ_G0032135.1 mouse_genomes_project 7 130812636 130821908 + MGP_WSBEiJ_P0085203 Gdpd3 protein_coding protein_coding MGP_WSBEiJ_T0085204.1 MGP_WSBEiJ_G0032135.1 mouse_genomes_project 7 130813147 130814512 + Gdpd3 protein_coding retained_intron MGP_WSBEiJ_T0085205.1 MGP_WSBEiJ_G0032135.1 mouse_genomes_project 7 130813149 130814961 + Gdpd3 protein_coding retained_intron MGP_WSBEiJ_T0085206.1 MGP_WSBEiJ_G0032135.1 mouse_genomes_project 7 130813477 130814335 + Gdpd3 protein_coding retained_intron MGP_WSBEiJ_T0085207.1 MGP_WSBEiJ_G0032135.1 mouse_genomes_project 7 130814449 130817468 + Gdpd3 protein_coding retained_intron MGP_WSBEiJ_T0085208.1 MGP_WSBEiJ_G0032135.1 mouse_genomes_project 7 130814819 130821912 + Gdpd3 protein_coding retained_intron MGP_WSBEiJ_T0084254.1 MGP_WSBEiJ_G0031880.1 mouse_genomes_project 7 107979014 107979962 + MGP_WSBEiJ_P0084254 protein_coding protein_coding MGP_WSBEiJ_T0010740.1 MGP_WSBEiJ_G0008897.1 mouse_genomes_project 7 131605771 131605908 + Mir7060 miRNA miRNA MGP_WSBEiJ_T0080368.1 MGP_WSBEiJ_G0030825.1 mouse_genomes_project 7 10637941 10674781 + MGP_WSBEiJ_P0080368 Pla2g4c protein_coding protein_coding MGP_WSBEiJ_T0080369.1 MGP_WSBEiJ_G0030825.1 mouse_genomes_project 7 10638953 10676093 + MGP_WSBEiJ_P0080369 Pla2g4c protein_coding protein_coding MGP_WSBEiJ_T0080370.1 MGP_WSBEiJ_G0030825.1 mouse_genomes_project 7 10642493 10676097 + MGP_WSBEiJ_P0080370 Pla2g4c protein_coding protein_coding MGP_WSBEiJ_T0084473.1 MGP_WSBEiJ_G0031983.1 mouse_genomes_project 7 112969088 112977587 + MGP_WSBEiJ_P0084473 Akip1 protein_coding protein_coding MGP_WSBEiJ_T0084474.1 MGP_WSBEiJ_G0031983.1 mouse_genomes_project 7 112969150 112974371 + MGP_WSBEiJ_P0084474 Akip1 protein_coding protein_coding MGP_WSBEiJ_T0084475.1 MGP_WSBEiJ_G0031983.1 mouse_genomes_project 7 112974230 112977366 + Akip1 protein_coding processed_transcript MGP_WSBEiJ_T0010659.1 MGP_WSBEiJ_G0008816.1 mouse_genomes_project 7 15371097 15371207 + Gm25068 miRNA miRNA MGP_WSBEiJ_T0081824.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30004176 30017179 - MGP_WSBEiJ_P0081824 Hpn protein_coding protein_coding MGP_WSBEiJ_T0081825.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30004176 30021411 - MGP_WSBEiJ_P0081825 Hpn protein_coding protein_coding MGP_WSBEiJ_T0081826.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30004176 30021404 - MGP_WSBEiJ_P0081826 Hpn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081827.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30004176 30021419 - MGP_WSBEiJ_P0081827 Hpn protein_coding protein_coding MGP_WSBEiJ_T0081828.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30004180 30007954 - MGP_WSBEiJ_P0081828 Hpn protein_coding protein_coding MGP_WSBEiJ_T0081829.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30004184 30004737 - MGP_WSBEiJ_P0081829 Hpn protein_coding protein_coding MGP_WSBEiJ_T0081830.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30004689 30005735 - Hpn protein_coding retained_intron MGP_WSBEiJ_T0081831.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30007631 30008646 - Hpn protein_coding retained_intron MGP_WSBEiJ_T0081832.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30007937 30008919 - Hpn protein_coding retained_intron MGP_WSBEiJ_T0081833.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30015458 30018140 - MGP_WSBEiJ_P0081833 Hpn protein_coding protein_coding MGP_WSBEiJ_T0081834.1 MGP_WSBEiJ_G0031208.1 mouse_genomes_project 7 30016747 30017191 - Hpn protein_coding retained_intron MGP_WSBEiJ_T0008689.1 MGP_WSBEiJ_G0007027.1 mouse_genomes_project 7 33970151 33978483 - Gm12756 lincRNA lincRNA MGP_WSBEiJ_T0008859.1 MGP_WSBEiJ_G0007142.1 mouse_genomes_project 7 125065237 125103719 + Gm45079 lincRNA lincRNA MGP_WSBEiJ_T0084390.1 MGP_WSBEiJ_G0031930.1 mouse_genomes_project 7 110158748 110159702 + MGP_WSBEiJ_P0084390 Olfr714 protein_coding protein_coding MGP_WSBEiJ_T0084180.1 MGP_WSBEiJ_G0031834.1 mouse_genomes_project 7 106882056 106883007 - MGP_WSBEiJ_P0084180 Olfr639 protein_coding protein_coding MGP_WSBEiJ_T0086109.1 MGP_WSBEiJ_G0032342.1 mouse_genomes_project 7 145748672 145751276 + MGP_WSBEiJ_P0086109 Ifitm1 protein_coding protein_coding MGP_WSBEiJ_T0086110.1 MGP_WSBEiJ_G0032342.1 mouse_genomes_project 7 145749479 145751276 + MGP_WSBEiJ_P0086110 Ifitm1 protein_coding protein_coding MGP_WSBEiJ_T0086111.1 MGP_WSBEiJ_G0032342.1 mouse_genomes_project 7 145749491 145751276 + MGP_WSBEiJ_P0086111 Ifitm1 protein_coding protein_coding MGP_WSBEiJ_T0005123.1 MGP_WSBEiJ_G0004359.1 mouse_genomes_project 7 35213861 35249658 + E130304I02Rik antisense antisense MGP_WSBEiJ_T0005124.1 MGP_WSBEiJ_G0004359.1 mouse_genomes_project 7 35213862 35214297 + E130304I02Rik antisense antisense MGP_WSBEiJ_T0008854.1 MGP_WSBEiJ_G0007138.1 mouse_genomes_project 7 120111399 120113499 + Gm45151 lincRNA lincRNA MGP_WSBEiJ_T0083857.1 MGP_WSBEiJ_G0031711.1 mouse_genomes_project 7 102968439 103016159 - MGP_WSBEiJ_P0083857 Ppme1 protein_coding protein_coding MGP_WSBEiJ_T0084122.1 MGP_WSBEiJ_G0031778.1 mouse_genomes_project 7 105735463 105736504 + MGP_WSBEiJ_P0084122 Olfr574 protein_coding protein_coding MGP_WSBEiJ_T0082584.1 MGP_WSBEiJ_G0031401.1 mouse_genomes_project 7 46187134 46195886 - MGP_WSBEiJ_P0082584 Kcnj14 protein_coding protein_coding MGP_WSBEiJ_T0080721.1 MGP_WSBEiJ_G0030934.1 mouse_genomes_project 7 17587605 17622444 - MGP_WSBEiJ_P0080721 Clptm1 protein_coding protein_coding MGP_WSBEiJ_T0017732.1 MGP_WSBEiJ_G0015076.1 mouse_genomes_project 7 22328134 22329386 + Gm44796 processed_transcript processed_transcript MGP_WSBEiJ_T0005100.1 MGP_WSBEiJ_G0004340.1 mouse_genomes_project 7 27865132 27866760 - Gm16282 antisense antisense MGP_WSBEiJ_T0010715.1 MGP_WSBEiJ_G0008872.1 mouse_genomes_project 7 65139750 65139867 - Mir6416 miRNA miRNA MGP_WSBEiJ_T0081189.1 MGP_WSBEiJ_G0031062.1 mouse_genomes_project 7 26012234 26015639 + MGP_WSBEiJ_P0081189 Sertad1 protein_coding protein_coding MGP_WSBEiJ_T0081190.1 MGP_WSBEiJ_G0031062.1 mouse_genomes_project 7 26012699 26014830 + MGP_WSBEiJ_P0081190 Sertad1 protein_coding protein_coding MGP_WSBEiJ_T0082095.1 MGP_WSBEiJ_G0031268.1 mouse_genomes_project 7 43514929 43523055 + Siglecf protein_coding retained_intron MGP_WSBEiJ_T0082096.1 MGP_WSBEiJ_G0031268.1 mouse_genomes_project 7 43514929 43523057 + MGP_WSBEiJ_P0082096 Siglecf protein_coding protein_coding MGP_WSBEiJ_T0082097.1 MGP_WSBEiJ_G0031268.1 mouse_genomes_project 7 43514971 43515432 + Siglecf protein_coding processed_transcript MGP_WSBEiJ_T0082098.1 MGP_WSBEiJ_G0031268.1 mouse_genomes_project 7 43514996 43523118 + MGP_WSBEiJ_P0082098 Siglecf protein_coding protein_coding MGP_WSBEiJ_T0082099.1 MGP_WSBEiJ_G0031268.1 mouse_genomes_project 7 43515110 43522876 + MGP_WSBEiJ_P0082099 Siglecf protein_coding protein_coding MGP_WSBEiJ_T0082100.1 MGP_WSBEiJ_G0031268.1 mouse_genomes_project 7 43515136 43520205 + MGP_WSBEiJ_P0082100 Siglecf protein_coding protein_coding MGP_WSBEiJ_T0101092.1 MGP_WSBEiJ_G0039549.1 mouse_genomes_project 7 88540156 88541063 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015359.1 MGP_WSBEiJ_G0013489.1 mouse_genomes_project 7 96896815 96896947 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080768.1 MGP_WSBEiJ_G0030946.1 mouse_genomes_project 7 17862878 17876494 - MGP_WSBEiJ_P0080768 Ceacam19 protein_coding protein_coding MGP_WSBEiJ_T0082045.1 MGP_WSBEiJ_G0031251.1 mouse_genomes_project 7 37762232 37773153 - MGP_WSBEiJ_P0082045 Plekhf1 protein_coding protein_coding MGP_WSBEiJ_T0010738.1 MGP_WSBEiJ_G0008895.1 mouse_genomes_project 7 130606988 130607047 - Mir7059 miRNA miRNA MGP_WSBEiJ_T0084250.1 MGP_WSBEiJ_G0031876.1 mouse_genomes_project 7 107925106 107926060 + MGP_WSBEiJ_P0084250 Olfr676 protein_coding protein_coding MGP_WSBEiJ_T0086375.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445597 147462855 + Tnnt3 protein_coding processed_transcript MGP_WSBEiJ_T0086376.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445597 147462855 + MGP_WSBEiJ_P0086376 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086377.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445597 147462855 + MGP_WSBEiJ_P0086377 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086378.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445597 147462855 + MGP_WSBEiJ_P0086378 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086379.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445597 147462855 + MGP_WSBEiJ_P0086379 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086380.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445597 147462855 + MGP_WSBEiJ_P0086380 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086381.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445597 147462855 + MGP_WSBEiJ_P0086381 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086382.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445597 147462855 + MGP_WSBEiJ_P0086382 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086383.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445604 147462850 + MGP_WSBEiJ_P0086383 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086384.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445604 147462850 + MGP_WSBEiJ_P0086384 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086385.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445604 147462850 + MGP_WSBEiJ_P0086385 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086386.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445604 147462850 + MGP_WSBEiJ_P0086386 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086387.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445625 147462854 + MGP_WSBEiJ_P0086387 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086388.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147445633 147462851 + MGP_WSBEiJ_P0086388 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086389.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448379 147458272 + MGP_WSBEiJ_P0086389 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086390.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448382 147459358 + MGP_WSBEiJ_P0086390 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086391.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448400 147462678 + MGP_WSBEiJ_P0086391 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086392.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448400 147462678 + MGP_WSBEiJ_P0086392 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086393.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448400 147462678 + MGP_WSBEiJ_P0086393 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086394.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448400 147462678 + MGP_WSBEiJ_P0086394 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086395.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448400 147462678 + MGP_WSBEiJ_P0086395 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086396.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448400 147462678 + MGP_WSBEiJ_P0086396 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086397.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448400 147462678 + MGP_WSBEiJ_P0086397 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086398.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147448400 147462678 + MGP_WSBEiJ_P0086398 Tnnt3 protein_coding protein_coding MGP_WSBEiJ_T0086399.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147450765 147459321 + Tnnt3 protein_coding retained_intron MGP_WSBEiJ_T0086400.1 MGP_WSBEiJ_G0032393.1 mouse_genomes_project 7 147460977 147462856 + Tnnt3 protein_coding retained_intron MGP_WSBEiJ_T0086036.1 MGP_WSBEiJ_G0032309.1 mouse_genomes_project 7 144917151 144931309 + MGP_WSBEiJ_P0086036 Cd163l1 protein_coding protein_coding MGP_WSBEiJ_T0008733.1 MGP_WSBEiJ_G0007061.1 mouse_genomes_project 7 64879781 64900896 + Gm45055 lincRNA lincRNA MGP_WSBEiJ_T0008734.1 MGP_WSBEiJ_G0007061.1 mouse_genomes_project 7 64885628 64900866 + Gm45055 lincRNA lincRNA MGP_WSBEiJ_T0083534.1 MGP_WSBEiJ_G0031619.1 mouse_genomes_project 7 88483330 88484332 - MGP_WSBEiJ_P0083534 Olfr304 protein_coding protein_coding MGP_WSBEiJ_T0082088.1 MGP_WSBEiJ_G0031267.1 mouse_genomes_project 7 43456308 43473380 - MGP_WSBEiJ_P0082088 Zfp715 protein_coding protein_coding MGP_WSBEiJ_T0082089.1 MGP_WSBEiJ_G0031267.1 mouse_genomes_project 7 43456634 43473388 - MGP_WSBEiJ_P0082089 Zfp715 protein_coding protein_coding MGP_WSBEiJ_T0082090.1 MGP_WSBEiJ_G0031267.1 mouse_genomes_project 7 43456634 43471619 - MGP_WSBEiJ_P0082090 Zfp715 protein_coding protein_coding MGP_WSBEiJ_T0082091.1 MGP_WSBEiJ_G0031267.1 mouse_genomes_project 7 43456634 43473396 - MGP_WSBEiJ_P0082091 Zfp715 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082092.1 MGP_WSBEiJ_G0031267.1 mouse_genomes_project 7 43460063 43473228 - MGP_WSBEiJ_P0082092 Zfp715 protein_coding protein_coding MGP_WSBEiJ_T0082093.1 MGP_WSBEiJ_G0031267.1 mouse_genomes_project 7 43461587 43473427 - Zfp715 protein_coding retained_intron MGP_WSBEiJ_T0082094.1 MGP_WSBEiJ_G0031267.1 mouse_genomes_project 7 43461721 43473196 - MGP_WSBEiJ_P0082094 Zfp715 protein_coding protein_coding MGP_WSBEiJ_T0080268.1 MGP_WSBEiJ_G0030794.1 mouse_genomes_project 7 9466165 9467092 + MGP_WSBEiJ_P0080268 Vmn1r80 protein_coding protein_coding MGP_WSBEiJ_T0083321.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81926754 81943266 - Man2a2 protein_coding retained_intron MGP_WSBEiJ_T0083322.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81926754 81952753 - MGP_WSBEiJ_P0083322 Man2a2 protein_coding protein_coding MGP_WSBEiJ_T0083323.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81928891 81939537 - MGP_WSBEiJ_P0083323 Man2a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083324.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81934699 81943476 - Man2a2 protein_coding retained_intron MGP_WSBEiJ_T0083325.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81938925 81939703 - Man2a2 protein_coding retained_intron MGP_WSBEiJ_T0083326.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81939508 81943304 - MGP_WSBEiJ_P0083326 Man2a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083327.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81940091 81952239 - MGP_WSBEiJ_P0083327 Man2a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083328.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81940255 81952504 - Man2a2 protein_coding retained_intron MGP_WSBEiJ_T0083329.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81942469 81943464 - Man2a2 protein_coding retained_intron MGP_WSBEiJ_T0083330.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81951011 81952236 - MGP_WSBEiJ_P0083330 Man2a2 protein_coding protein_coding MGP_WSBEiJ_T0083331.1 MGP_WSBEiJ_G0031563.1 mouse_genomes_project 7 81951039 81952460 - MGP_WSBEiJ_P0083331 Man2a2 protein_coding protein_coding MGP_WSBEiJ_T0081111.1 MGP_WSBEiJ_G0031046.1 mouse_genomes_project 7 25656230 25664373 - MGP_WSBEiJ_P0081111 Egln2 protein_coding protein_coding MGP_WSBEiJ_T0081112.1 MGP_WSBEiJ_G0031046.1 mouse_genomes_project 7 25656231 25658443 - Egln2 protein_coding processed_transcript MGP_WSBEiJ_T0081113.1 MGP_WSBEiJ_G0031046.1 mouse_genomes_project 7 25656560 25663984 - MGP_WSBEiJ_P0081113 Egln2 protein_coding protein_coding MGP_WSBEiJ_T0081114.1 MGP_WSBEiJ_G0031046.1 mouse_genomes_project 7 25663103 25663853 - Egln2 protein_coding processed_transcript MGP_WSBEiJ_T0098469.1 MGP_WSBEiJ_G0037132.1 mouse_genomes_project 7 17167155 17167315 + Gm25134 snRNA snRNA MGP_WSBEiJ_T0100968.1 MGP_WSBEiJ_G0039425.1 mouse_genomes_project 7 9113982 9114372 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002163.1 MGP_WSBEiJ_G0002082.1 mouse_genomes_project 7 34638500 34639254 + TEC TEC MGP_WSBEiJ_T0005095.1 MGP_WSBEiJ_G0004335.1 mouse_genomes_project 7 25288848 25291714 - Gm44963 antisense antisense MGP_WSBEiJ_T0082387.1 MGP_WSBEiJ_G0031353.1 mouse_genomes_project 7 45434433 45439445 - MGP_WSBEiJ_P0082387 Rpl13a protein_coding protein_coding MGP_WSBEiJ_T0082388.1 MGP_WSBEiJ_G0031353.1 mouse_genomes_project 7 45437281 45439414 - MGP_WSBEiJ_P0082388 Rpl13a protein_coding unknown_likely_coding MGP_WSBEiJ_T0084507.1 MGP_WSBEiJ_G0031995.1 mouse_genomes_project 7 113530352 113594942 + MGP_WSBEiJ_P0084507 Swap70 protein_coding protein_coding MGP_WSBEiJ_T0010700.1 MGP_WSBEiJ_G0008857.1 mouse_genomes_project 7 62488573 62488642 - Gm22466 miRNA miRNA MGP_WSBEiJ_T0081737.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29735964 29751083 - MGP_WSBEiJ_P0081737 Cd22 protein_coding protein_coding MGP_WSBEiJ_T0081738.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29736389 29752089 - MGP_WSBEiJ_P0081738 Cd22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081739.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29736389 29752324 - MGP_WSBEiJ_P0081739 Cd22 protein_coding protein_coding MGP_WSBEiJ_T0081740.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29736389 29752120 - MGP_WSBEiJ_P0081740 Cd22 protein_coding protein_coding MGP_WSBEiJ_T0081741.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29736391 29750526 - MGP_WSBEiJ_P0081741 Cd22 protein_coding protein_coding MGP_WSBEiJ_T0081742.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29736825 29752389 - MGP_WSBEiJ_P0081742 Cd22 protein_coding protein_coding MGP_WSBEiJ_T0081743.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29736851 29752334 - MGP_WSBEiJ_P0081743 Cd22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081744.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29737093 29751380 - MGP_WSBEiJ_P0081744 Cd22 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081745.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29740994 29744898 - MGP_WSBEiJ_P0081745 Cd22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081746.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29747362 29751279 - Cd22 protein_coding processed_transcript MGP_WSBEiJ_T0081747.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29748739 29752316 - MGP_WSBEiJ_P0081747 Cd22 protein_coding protein_coding MGP_WSBEiJ_T0081748.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29748879 29749403 - Cd22 protein_coding retained_intron MGP_WSBEiJ_T0081749.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29748919 29752333 - Cd22 protein_coding processed_transcript MGP_WSBEiJ_T0081750.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29748958 29752333 - Cd22 protein_coding processed_transcript MGP_WSBEiJ_T0081751.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29749034 29752323 - MGP_WSBEiJ_P0081751 Cd22 protein_coding protein_coding MGP_WSBEiJ_T0081752.1 MGP_WSBEiJ_G0031196.1 mouse_genomes_project 7 29751247 29752397 - Cd22 protein_coding processed_transcript MGP_WSBEiJ_T0084717.1 MGP_WSBEiJ_G0032033.1 mouse_genomes_project 7 121736369 121750019 - MGP_WSBEiJ_P0084717 Rps15a protein_coding protein_coding MGP_WSBEiJ_T0084718.1 MGP_WSBEiJ_G0032033.1 mouse_genomes_project 7 121736375 121749086 - MGP_WSBEiJ_P0084718 Rps15a protein_coding protein_coding MGP_WSBEiJ_T0084719.1 MGP_WSBEiJ_G0032033.1 mouse_genomes_project 7 121741059 121749508 - MGP_WSBEiJ_P0084719 Rps15a protein_coding protein_coding MGP_WSBEiJ_T0084720.1 MGP_WSBEiJ_G0032033.1 mouse_genomes_project 7 121741164 121749385 - MGP_WSBEiJ_P0084720 Rps15a protein_coding protein_coding MGP_WSBEiJ_T0084721.1 MGP_WSBEiJ_G0032033.1 mouse_genomes_project 7 121741662 121749058 - Rps15a protein_coding retained_intron MGP_WSBEiJ_T0084722.1 MGP_WSBEiJ_G0032033.1 mouse_genomes_project 7 121741994 121749960 - MGP_WSBEiJ_P0084722 Rps15a protein_coding protein_coding MGP_WSBEiJ_T0084723.1 MGP_WSBEiJ_G0032033.1 mouse_genomes_project 7 121748614 121749959 - MGP_WSBEiJ_P0084723 Rps15a protein_coding protein_coding MGP_WSBEiJ_T0081937.1 MGP_WSBEiJ_G0031233.1 mouse_genomes_project 7 34545262 34548202 - Lrp3 protein_coding processed_transcript MGP_WSBEiJ_T0081938.1 MGP_WSBEiJ_G0031233.1 mouse_genomes_project 7 34546113 34548468 - Lrp3 protein_coding retained_intron MGP_WSBEiJ_T0081939.1 MGP_WSBEiJ_G0031233.1 mouse_genomes_project 7 34546113 34560728 - MGP_WSBEiJ_P0081939 Lrp3 protein_coding protein_coding MGP_WSBEiJ_T0081940.1 MGP_WSBEiJ_G0031233.1 mouse_genomes_project 7 34546114 34560522 - MGP_WSBEiJ_P0081940 Lrp3 protein_coding protein_coding MGP_WSBEiJ_T0015393.1 MGP_WSBEiJ_G0013523.1 mouse_genomes_project 7 118171042 118172167 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081853.1 MGP_WSBEiJ_G0031215.1 mouse_genomes_project 7 32977549 32978733 + MGP_WSBEiJ_P0081853 Scgb1b24 protein_coding protein_coding MGP_WSBEiJ_T0086220.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146282894 146291078 - MGP_WSBEiJ_P0086220 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086221.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146282899 146291013 - Slc25a22 protein_coding retained_intron MGP_WSBEiJ_T0086222.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146282899 146290817 - MGP_WSBEiJ_P0086222 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086223.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146282899 146287745 - MGP_WSBEiJ_P0086223 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086224.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146282899 146290823 - MGP_WSBEiJ_P0086224 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086225.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146282902 146288492 - Slc25a22 protein_coding retained_intron MGP_WSBEiJ_T0086226.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146282902 146290824 - MGP_WSBEiJ_P0086226 Slc25a22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086227.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146282906 146285904 - MGP_WSBEiJ_P0086227 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086228.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146284104 146285189 - Slc25a22 protein_coding retained_intron MGP_WSBEiJ_T0086229.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146284170 146285210 - Slc25a22 protein_coding retained_intron MGP_WSBEiJ_T0086230.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146284336 146284749 - MGP_WSBEiJ_P0086230 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086231.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146284518 146285999 - Slc25a22 protein_coding retained_intron MGP_WSBEiJ_T0086232.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146284726 146288548 - MGP_WSBEiJ_P0086232 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086233.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146284776 146287574 - MGP_WSBEiJ_P0086233 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086234.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146284789 146287466 - MGP_WSBEiJ_P0086234 Slc25a22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086235.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146284793 146287158 - MGP_WSBEiJ_P0086235 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086236.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146285043 146287121 - Slc25a22 protein_coding retained_intron MGP_WSBEiJ_T0086237.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146285057 146290779 - MGP_WSBEiJ_P0086237 Slc25a22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086238.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146285195 146288474 - Slc25a22 protein_coding processed_transcript MGP_WSBEiJ_T0086239.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146285261 146290778 - MGP_WSBEiJ_P0086239 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086240.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146285735 146288475 - Slc25a22 protein_coding retained_intron MGP_WSBEiJ_T0086241.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146285851 146287751 - MGP_WSBEiJ_P0086241 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086242.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146286747 146287755 - MGP_WSBEiJ_P0086242 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086243.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146287080 146287694 - MGP_WSBEiJ_P0086243 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0086244.1 MGP_WSBEiJ_G0032367.1 mouse_genomes_project 7 146287112 146287745 - MGP_WSBEiJ_P0086244 Slc25a22 protein_coding protein_coding MGP_WSBEiJ_T0101013.1 MGP_WSBEiJ_G0039470.1 mouse_genomes_project 7 30333098 30334371 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083269.1 MGP_WSBEiJ_G0031556.1 mouse_genomes_project 7 81815474 81830329 + MGP_WSBEiJ_P0083269 Ttll13 protein_coding protein_coding MGP_WSBEiJ_T0083270.1 MGP_WSBEiJ_G0031556.1 mouse_genomes_project 7 81815523 81815903 + Ttll13 protein_coding retained_intron MGP_WSBEiJ_T0083271.1 MGP_WSBEiJ_G0031556.1 mouse_genomes_project 7 81815653 81828704 + Ttll13 protein_coding retained_intron MGP_WSBEiJ_T0083272.1 MGP_WSBEiJ_G0031556.1 mouse_genomes_project 7 81816092 81822415 + Ttll13 protein_coding retained_intron MGP_WSBEiJ_T0083273.1 MGP_WSBEiJ_G0031556.1 mouse_genomes_project 7 81816486 81830178 + MGP_WSBEiJ_P0083273 Ttll13 protein_coding protein_coding MGP_WSBEiJ_T0081481.1 MGP_WSBEiJ_G0031136.1 mouse_genomes_project 7 28623229 28642933 - MGP_WSBEiJ_P0081481 protein_coding protein_coding MGP_WSBEiJ_T0081482.1 MGP_WSBEiJ_G0031136.1 mouse_genomes_project 7 28632448 28642905 - protein_coding retained_intron MGP_WSBEiJ_T0081483.1 MGP_WSBEiJ_G0031136.1 mouse_genomes_project 7 28633978 28642961 - MGP_WSBEiJ_P0081483 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081484.1 MGP_WSBEiJ_G0031136.1 mouse_genomes_project 7 28640145 28642706 - protein_coding processed_transcript MGP_WSBEiJ_T0083458.1 MGP_WSBEiJ_G0031590.1 mouse_genomes_project 7 83880129 83992681 + MGP_WSBEiJ_P0083458 Sh3gl3 protein_coding protein_coding MGP_WSBEiJ_T0083459.1 MGP_WSBEiJ_G0031590.1 mouse_genomes_project 7 83880776 83975796 + Sh3gl3 protein_coding retained_intron MGP_WSBEiJ_T0083460.1 MGP_WSBEiJ_G0031590.1 mouse_genomes_project 7 83880790 84017958 + MGP_WSBEiJ_P0083460 Sh3gl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083461.1 MGP_WSBEiJ_G0031590.1 mouse_genomes_project 7 83880884 84017958 + MGP_WSBEiJ_P0083461 Sh3gl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083462.1 MGP_WSBEiJ_G0031590.1 mouse_genomes_project 7 83880909 84017957 + MGP_WSBEiJ_P0083462 Sh3gl3 protein_coding protein_coding MGP_WSBEiJ_T0083463.1 MGP_WSBEiJ_G0031590.1 mouse_genomes_project 7 83881090 83992744 + MGP_WSBEiJ_P0083463 Sh3gl3 protein_coding protein_coding MGP_WSBEiJ_T0083464.1 MGP_WSBEiJ_G0031590.1 mouse_genomes_project 7 83881168 83882237 + Sh3gl3 protein_coding processed_transcript MGP_WSBEiJ_T0083465.1 MGP_WSBEiJ_G0031590.1 mouse_genomes_project 7 83976643 84017768 + MGP_WSBEiJ_P0083465 Sh3gl3 protein_coding protein_coding MGP_WSBEiJ_T0080390.1 MGP_WSBEiJ_G0030837.1 mouse_genomes_project 7 13308272 13309495 + MGP_WSBEiJ_P0080390 protein_coding protein_coding MGP_WSBEiJ_T0085220.1 MGP_WSBEiJ_G0032137.1 mouse_genomes_project 7 130827765 130831843 + MGP_WSBEiJ_P0085220 Tbx6 protein_coding protein_coding MGP_WSBEiJ_T0085221.1 MGP_WSBEiJ_G0032137.1 mouse_genomes_project 7 130827765 130831642 + MGP_WSBEiJ_P0085221 Tbx6 protein_coding protein_coding MGP_WSBEiJ_T0081719.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29649351 29652423 + Krtdap protein_coding retained_intron MGP_WSBEiJ_T0081720.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29649360 29653727 + MGP_WSBEiJ_P0081720 Krtdap protein_coding protein_coding MGP_WSBEiJ_T0081721.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29649360 29653743 + MGP_WSBEiJ_P0081721 Krtdap protein_coding protein_coding MGP_WSBEiJ_T0081722.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29649360 29653749 + MGP_WSBEiJ_P0081722 Krtdap protein_coding protein_coding MGP_WSBEiJ_T0081723.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29649360 29653757 + MGP_WSBEiJ_P0081723 Krtdap protein_coding protein_coding MGP_WSBEiJ_T0081724.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29649360 29653745 + MGP_WSBEiJ_P0081724 Krtdap protein_coding protein_coding MGP_WSBEiJ_T0081725.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29652461 29653745 + Krtdap protein_coding retained_intron MGP_WSBEiJ_T0081726.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29652513 29653743 + Krtdap protein_coding retained_intron MGP_WSBEiJ_T0081727.1 MGP_WSBEiJ_G0031192.1 mouse_genomes_project 7 29653146 29653745 + Krtdap protein_coding retained_intron MGP_WSBEiJ_T0084151.1 MGP_WSBEiJ_G0031805.1 mouse_genomes_project 7 106355981 106361809 + MGP_WSBEiJ_P0084151 Olfr613 protein_coding protein_coding MGP_WSBEiJ_T0083664.1 MGP_WSBEiJ_G0031663.1 mouse_genomes_project 7 99554232 99764190 + MGP_WSBEiJ_P0083664 Gab2 protein_coding protein_coding MGP_WSBEiJ_T0083665.1 MGP_WSBEiJ_G0031663.1 mouse_genomes_project 7 99555302 99760273 + MGP_WSBEiJ_P0083665 Gab2 protein_coding protein_coding MGP_WSBEiJ_T0082385.1 MGP_WSBEiJ_G0031351.1 mouse_genomes_project 7 45397908 45408899 - MGP_WSBEiJ_P0082385 Fcgrt protein_coding protein_coding MGP_WSBEiJ_T0015310.1 MGP_WSBEiJ_G0013440.1 mouse_genomes_project 7 53626756 53627020 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081007.1 MGP_WSBEiJ_G0031014.1 mouse_genomes_project 7 23687474 23701176 - MGP_WSBEiJ_P0081007 Cxcl17 protein_coding protein_coding MGP_WSBEiJ_T0081008.1 MGP_WSBEiJ_G0031014.1 mouse_genomes_project 7 23687474 23701176 - MGP_WSBEiJ_P0081008 Cxcl17 protein_coding protein_coding MGP_WSBEiJ_T0101077.1 MGP_WSBEiJ_G0039534.1 mouse_genomes_project 7 87158804 87160580 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080028.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1373346 1382625 + MGP_WSBEiJ_P0080028 Eps8l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080029.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1373346 1381882 + MGP_WSBEiJ_P0080029 Eps8l1 protein_coding protein_coding MGP_WSBEiJ_T0080030.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1373355 1392088 + MGP_WSBEiJ_P0080030 Eps8l1 protein_coding protein_coding MGP_WSBEiJ_T0080031.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1377147 1383489 + MGP_WSBEiJ_P0080031 Eps8l1 protein_coding protein_coding MGP_WSBEiJ_T0080032.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1377389 1382024 + Eps8l1 protein_coding retained_intron MGP_WSBEiJ_T0080033.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1377396 1382834 + Eps8l1 protein_coding retained_intron MGP_WSBEiJ_T0080034.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1377396 1391926 + MGP_WSBEiJ_P0080034 Eps8l1 protein_coding protein_coding MGP_WSBEiJ_T0080035.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1377423 1382697 + MGP_WSBEiJ_P0080035 Eps8l1 protein_coding protein_coding MGP_WSBEiJ_T0080036.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1377503 1393171 + MGP_WSBEiJ_P0080036 Eps8l1 protein_coding protein_coding MGP_WSBEiJ_T0080037.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1377515 1391924 + MGP_WSBEiJ_P0080037 Eps8l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080038.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1377523 1382574 + MGP_WSBEiJ_P0080038 Eps8l1 protein_coding protein_coding MGP_WSBEiJ_T0080039.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1386580 1387280 + Eps8l1 protein_coding processed_transcript MGP_WSBEiJ_T0080040.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1390111 1390654 + Eps8l1 protein_coding processed_transcript MGP_WSBEiJ_T0080041.1 MGP_WSBEiJ_G0030707.1 mouse_genomes_project 7 1390349 1391928 + MGP_WSBEiJ_P0080041 Eps8l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100148.1 MGP_WSBEiJ_G0038731.1 mouse_genomes_project 7 69650153 69651707 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100149.1 MGP_WSBEiJ_G0038731.1 mouse_genomes_project 7 69650535 69651255 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0015426.1 MGP_WSBEiJ_G0013556.1 mouse_genomes_project 7 145550885 145551372 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080149.1 MGP_WSBEiJ_G0030731.1 mouse_genomes_project 7 1873028 1875774 + MGP_WSBEiJ_P0080149 Nat14 protein_coding protein_coding MGP_WSBEiJ_T0005191.1 MGP_WSBEiJ_G0004405.1 mouse_genomes_project 7 115921060 115929770 - Parvaos antisense antisense MGP_WSBEiJ_T0015241.1 MGP_WSBEiJ_G0013371.1 mouse_genomes_project 7 15994088 15995610 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086257.1 MGP_WSBEiJ_G0032369.1 mouse_genomes_project 7 146301884 146306778 + MGP_WSBEiJ_P0086257 Rplp2 protein_coding protein_coding MGP_WSBEiJ_T0086258.1 MGP_WSBEiJ_G0032369.1 mouse_genomes_project 7 146302145 146303131 + Rplp2 protein_coding retained_intron MGP_WSBEiJ_T0086259.1 MGP_WSBEiJ_G0032369.1 mouse_genomes_project 7 146302183 146303542 + Rplp2 protein_coding retained_intron MGP_WSBEiJ_T0086260.1 MGP_WSBEiJ_G0032369.1 mouse_genomes_project 7 146302226 146306543 + MGP_WSBEiJ_P0086260 Rplp2 protein_coding protein_coding MGP_WSBEiJ_T0086261.1 MGP_WSBEiJ_G0032369.1 mouse_genomes_project 7 146302364 146306543 + MGP_WSBEiJ_P0086261 Rplp2 protein_coding protein_coding MGP_WSBEiJ_T0086262.1 MGP_WSBEiJ_G0032369.1 mouse_genomes_project 7 146305791 146306542 + Rplp2 protein_coding processed_transcript MGP_WSBEiJ_T0084205.1 MGP_WSBEiJ_G0031850.1 mouse_genomes_project 7 107130739 107143688 + MGP_WSBEiJ_P0084205 protein_coding protein_coding MGP_WSBEiJ_T0084206.1 MGP_WSBEiJ_G0031850.1 mouse_genomes_project 7 107130741 107143688 + MGP_WSBEiJ_P0084206 protein_coding protein_coding MGP_WSBEiJ_T0084208.1 MGP_WSBEiJ_G0031850.1 mouse_genomes_project 7 107130836 107146763 + MGP_WSBEiJ_P0084208 protein_coding protein_coding MGP_WSBEiJ_T0084209.1 MGP_WSBEiJ_G0031850.1 mouse_genomes_project 7 107130845 107143070 + MGP_WSBEiJ_P0084209 protein_coding protein_coding MGP_WSBEiJ_T0085770.1 MGP_WSBEiJ_G0032241.1 mouse_genomes_project 7 135690451 135700872 + MGP_WSBEiJ_P0085770 Pstk protein_coding protein_coding MGP_WSBEiJ_T0085771.1 MGP_WSBEiJ_G0032241.1 mouse_genomes_project 7 135690456 135700869 + MGP_WSBEiJ_P0085771 Pstk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085772.1 MGP_WSBEiJ_G0032241.1 mouse_genomes_project 7 135690467 135693556 + Pstk protein_coding processed_transcript MGP_WSBEiJ_T0085773.1 MGP_WSBEiJ_G0032241.1 mouse_genomes_project 7 135692327 135700866 + Pstk protein_coding retained_intron MGP_WSBEiJ_T0085774.1 MGP_WSBEiJ_G0032241.1 mouse_genomes_project 7 135696956 135700869 + Pstk protein_coding processed_transcript MGP_WSBEiJ_T0085775.1 MGP_WSBEiJ_G0032241.1 mouse_genomes_project 7 135697288 135700760 + Pstk protein_coding retained_intron MGP_WSBEiJ_T0085776.1 MGP_WSBEiJ_G0032241.1 mouse_genomes_project 7 135697529 135700865 + Pstk protein_coding processed_transcript MGP_WSBEiJ_T0101072.1 MGP_WSBEiJ_G0039529.1 mouse_genomes_project 7 86910022 86910407 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082080.1 MGP_WSBEiJ_G0031263.1 mouse_genomes_project 7 41975429 42001526 + MGP_WSBEiJ_P0082080 Vmn2r60 protein_coding protein_coding MGP_WSBEiJ_T0085312.1 MGP_WSBEiJ_G0032150.1 mouse_genomes_project 7 131030054 131034433 + MGP_WSBEiJ_P0085312 Cdipt protein_coding protein_coding MGP_WSBEiJ_T0085313.1 MGP_WSBEiJ_G0032150.1 mouse_genomes_project 7 131030358 131034427 + MGP_WSBEiJ_P0085313 Cdipt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085314.1 MGP_WSBEiJ_G0032150.1 mouse_genomes_project 7 131030380 131034429 + MGP_WSBEiJ_P0085314 Cdipt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085315.1 MGP_WSBEiJ_G0032150.1 mouse_genomes_project 7 131030510 131033579 + MGP_WSBEiJ_P0085315 Cdipt protein_coding protein_coding MGP_WSBEiJ_T0085316.1 MGP_WSBEiJ_G0032150.1 mouse_genomes_project 7 131030652 131033965 + MGP_WSBEiJ_P0085316 Cdipt protein_coding protein_coding MGP_WSBEiJ_T0085317.1 MGP_WSBEiJ_G0032150.1 mouse_genomes_project 7 131032155 131033403 + Cdipt protein_coding retained_intron MGP_WSBEiJ_T0005147.1 MGP_WSBEiJ_G0004375.1 mouse_genomes_project 7 74765747 74783019 + Gm44686 antisense antisense MGP_WSBEiJ_T0008810.1 MGP_WSBEiJ_G0007111.1 mouse_genomes_project 7 84598918 84608267 + 1700010L04Rik lincRNA lincRNA MGP_WSBEiJ_T0008811.1 MGP_WSBEiJ_G0007111.1 mouse_genomes_project 7 84604672 84608266 + 1700010L04Rik lincRNA lincRNA MGP_WSBEiJ_T0008812.1 MGP_WSBEiJ_G0007111.1 mouse_genomes_project 7 84604682 84607822 + 1700010L04Rik lincRNA lincRNA MGP_WSBEiJ_T0099757.1 MGP_WSBEiJ_G0038420.1 mouse_genomes_project 7 146303317 146303454 + Snora52 snoRNA snoRNA MGP_WSBEiJ_T0082111.1 MGP_WSBEiJ_G0031274.1 mouse_genomes_project 7 43609253 43611806 + MGP_WSBEiJ_P0082111 Cldnd2 protein_coding protein_coding MGP_WSBEiJ_T0082112.1 MGP_WSBEiJ_G0031274.1 mouse_genomes_project 7 43610047 43611771 + MGP_WSBEiJ_P0082112 Cldnd2 protein_coding protein_coding MGP_WSBEiJ_T0015259.1 MGP_WSBEiJ_G0013389.1 mouse_genomes_project 7 24312763 24312932 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005099.1 MGP_WSBEiJ_G0004339.1 mouse_genomes_project 7 26530411 26533417 + Gm26891 antisense antisense MGP_WSBEiJ_T0008800.1 MGP_WSBEiJ_G0007108.1 mouse_genomes_project 7 81704218 81705825 + Gm45202 lincRNA lincRNA MGP_WSBEiJ_T0083659.1 MGP_WSBEiJ_G0031662.1 mouse_genomes_project 7 99425589 99536374 + MGP_WSBEiJ_P0083659 Nars2 protein_coding protein_coding MGP_WSBEiJ_T0083660.1 MGP_WSBEiJ_G0031662.1 mouse_genomes_project 7 99425605 99473193 + Nars2 protein_coding processed_transcript MGP_WSBEiJ_T0083661.1 MGP_WSBEiJ_G0031662.1 mouse_genomes_project 7 99425646 99512661 + MGP_WSBEiJ_P0083661 Nars2 protein_coding protein_coding MGP_WSBEiJ_T0083662.1 MGP_WSBEiJ_G0031662.1 mouse_genomes_project 7 99496504 99534558 + MGP_WSBEiJ_P0083662 Nars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083663.1 MGP_WSBEiJ_G0031662.1 mouse_genomes_project 7 99512023 99534588 + MGP_WSBEiJ_P0083663 Nars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005058.1 MGP_WSBEiJ_G0004314.1 mouse_genomes_project 7 984239 1045600 - 9430041J12Rik antisense antisense MGP_WSBEiJ_T0005059.1 MGP_WSBEiJ_G0004314.1 mouse_genomes_project 7 984269 1045309 - 9430041J12Rik antisense antisense MGP_WSBEiJ_T0005060.1 MGP_WSBEiJ_G0004314.1 mouse_genomes_project 7 984586 1045309 - 9430041J12Rik antisense antisense MGP_WSBEiJ_T0005061.1 MGP_WSBEiJ_G0004314.1 mouse_genomes_project 7 1044771 1045309 - 9430041J12Rik antisense pseudogene MGP_WSBEiJ_T0008787.1 MGP_WSBEiJ_G0007102.1 mouse_genomes_project 7 80294849 80295126 + 1700011D18Rik lincRNA lincRNA MGP_WSBEiJ_T0080910.1 MGP_WSBEiJ_G0030996.1 mouse_genomes_project 7 23128752 23133569 + MGP_WSBEiJ_P0080910 Cd79a protein_coding protein_coding MGP_WSBEiJ_T0080911.1 MGP_WSBEiJ_G0030996.1 mouse_genomes_project 7 23128893 23133238 + MGP_WSBEiJ_P0080911 Cd79a protein_coding unknown_likely_coding MGP_WSBEiJ_T0081378.1 MGP_WSBEiJ_G0031114.1 mouse_genomes_project 7 27595900 27610142 + MGP_WSBEiJ_P0081378 Capn12 protein_coding protein_coding MGP_WSBEiJ_T0084440.1 MGP_WSBEiJ_G0031973.1 mouse_genomes_project 7 112116475 112120876 - MGP_WSBEiJ_P0084440 Olfr519 protein_coding protein_coding MGP_WSBEiJ_T0084441.1 MGP_WSBEiJ_G0031973.1 mouse_genomes_project 7 112116475 112121026 - MGP_WSBEiJ_P0084441 Olfr519 protein_coding protein_coding MGP_WSBEiJ_T0008825.1 MGP_WSBEiJ_G0007122.1 mouse_genomes_project 7 100892356 100920740 - Gm44507 lincRNA lincRNA MGP_WSBEiJ_T0081698.1 MGP_WSBEiJ_G0031186.1 mouse_genomes_project 7 29533248 29533846 + MGP_WSBEiJ_P0081698 2200002J24Rik protein_coding protein_coding MGP_WSBEiJ_T0083525.1 MGP_WSBEiJ_G0031611.1 mouse_genomes_project 7 87036820 87758135 - MGP_WSBEiJ_P0083525 protein_coding protein_coding MGP_WSBEiJ_T0081375.1 MGP_WSBEiJ_G0031113.1 mouse_genomes_project 7 27570521 27572364 + MGP_WSBEiJ_P0081375 Lgals7 protein_coding protein_coding MGP_WSBEiJ_T0081376.1 MGP_WSBEiJ_G0031113.1 mouse_genomes_project 7 27570897 27572952 + MGP_WSBEiJ_P0081376 Lgals7 protein_coding protein_coding MGP_WSBEiJ_T0081377.1 MGP_WSBEiJ_G0031113.1 mouse_genomes_project 7 27571123 27571656 + Lgals7 protein_coding processed_transcript MGP_WSBEiJ_T0099747.1 MGP_WSBEiJ_G0038410.1 mouse_genomes_project 7 119892978 119893065 - Snord14a snoRNA snoRNA MGP_WSBEiJ_T0085987.1 MGP_WSBEiJ_G0032294.1 mouse_genomes_project 7 144663189 144671697 - 6430531B16Rik protein_coding retained_intron MGP_WSBEiJ_T0085988.1 MGP_WSBEiJ_G0032294.1 mouse_genomes_project 7 144663189 144671729 - MGP_WSBEiJ_P0085988 6430531B16Rik protein_coding protein_coding MGP_WSBEiJ_T0085989.1 MGP_WSBEiJ_G0032294.1 mouse_genomes_project 7 144668469 144671697 - MGP_WSBEiJ_P0085989 6430531B16Rik protein_coding protein_coding MGP_WSBEiJ_T0080688.1 MGP_WSBEiJ_G0030922.1 mouse_genomes_project 7 17351607 17363401 + MGP_WSBEiJ_P0080688 Ckm protein_coding protein_coding MGP_WSBEiJ_T0084627.1 MGP_WSBEiJ_G0032019.1 mouse_genomes_project 7 117676355 117714288 - MGP_WSBEiJ_P0084627 Copb1 protein_coding protein_coding MGP_WSBEiJ_T0015318.1 MGP_WSBEiJ_G0013448.1 mouse_genomes_project 7 57712111 57712372 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017819.1 MGP_WSBEiJ_G0015112.1 mouse_genomes_project 7 130996123 131006832 + Gm21984 processed_transcript processed_transcript MGP_WSBEiJ_T0081865.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33418100 33447926 - MGP_WSBEiJ_P0081865 Uba2 protein_coding protein_coding MGP_WSBEiJ_T0081866.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33418126 33419499 - Uba2 protein_coding retained_intron MGP_WSBEiJ_T0081867.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33418495 33421961 - MGP_WSBEiJ_P0081867 Uba2 protein_coding protein_coding MGP_WSBEiJ_T0081868.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33418802 33420682 - Uba2 protein_coding retained_intron MGP_WSBEiJ_T0081869.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33419841 33424494 - Uba2 protein_coding retained_intron MGP_WSBEiJ_T0081870.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33430575 33441039 - MGP_WSBEiJ_P0081870 Uba2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081871.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33433582 33436973 - Uba2 protein_coding retained_intron MGP_WSBEiJ_T0081872.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33434171 33443764 - MGP_WSBEiJ_P0081872 Uba2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081873.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33440985 33448950 - MGP_WSBEiJ_P0081873 Uba2 protein_coding protein_coding MGP_WSBEiJ_T0081874.1 MGP_WSBEiJ_G0031221.1 mouse_genomes_project 7 33442318 33443687 - Uba2 protein_coding retained_intron MGP_WSBEiJ_T0080246.1 MGP_WSBEiJ_G0030776.1 mouse_genomes_project 7 4321176 4329570 - MGP_WSBEiJ_P0080246 Zfp773 protein_coding protein_coding MGP_WSBEiJ_T0081390.1 MGP_WSBEiJ_G0031117.1 mouse_genomes_project 7 27700748 27722603 + MGP_WSBEiJ_P0081390 Map4k1 protein_coding protein_coding MGP_WSBEiJ_T0081391.1 MGP_WSBEiJ_G0031117.1 mouse_genomes_project 7 27700850 27722598 + MGP_WSBEiJ_P0081391 Map4k1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0008784.1 MGP_WSBEiJ_G0007100.1 mouse_genomes_project 7 77101077 77104086 - AU020206 lincRNA lincRNA MGP_WSBEiJ_T0008785.1 MGP_WSBEiJ_G0007100.1 mouse_genomes_project 7 77101801 77113936 - AU020206 lincRNA lincRNA MGP_WSBEiJ_T0101069.1 MGP_WSBEiJ_G0039526.1 mouse_genomes_project 7 86623440 86624457 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083614.1 MGP_WSBEiJ_G0031652.1 mouse_genomes_project 7 92713310 92719767 - MGP_WSBEiJ_P0083614 Tmem126a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083615.1 MGP_WSBEiJ_G0031652.1 mouse_genomes_project 7 92713315 92719788 - MGP_WSBEiJ_P0083615 Tmem126a protein_coding protein_coding MGP_WSBEiJ_T0083616.1 MGP_WSBEiJ_G0031652.1 mouse_genomes_project 7 92717763 92719767 - Tmem126a protein_coding retained_intron MGP_WSBEiJ_T0084842.1 MGP_WSBEiJ_G0032063.1 mouse_genomes_project 7 123863754 123876341 - MGP_WSBEiJ_P0084842 Zp2 protein_coding protein_coding MGP_WSBEiJ_T0015358.1 MGP_WSBEiJ_G0013488.1 mouse_genomes_project 7 96611643 96611913 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081425.1 MGP_WSBEiJ_G0031123.1 mouse_genomes_project 7 27901683 27908693 - MGP_WSBEiJ_P0081425 Psmd8 protein_coding protein_coding MGP_WSBEiJ_T0081426.1 MGP_WSBEiJ_G0031123.1 mouse_genomes_project 7 27901683 27908721 - MGP_WSBEiJ_P0081426 Psmd8 protein_coding protein_coding MGP_WSBEiJ_T0081427.1 MGP_WSBEiJ_G0031123.1 mouse_genomes_project 7 27901683 27908572 - MGP_WSBEiJ_P0081427 Psmd8 protein_coding protein_coding MGP_WSBEiJ_T0085018.1 MGP_WSBEiJ_G0032106.1 mouse_genomes_project 7 129445663 129470588 - MGP_WSBEiJ_P0085018 Nsmce1 protein_coding protein_coding MGP_WSBEiJ_T0085019.1 MGP_WSBEiJ_G0032106.1 mouse_genomes_project 7 129449132 129470391 - MGP_WSBEiJ_P0085019 Nsmce1 protein_coding protein_coding MGP_WSBEiJ_T0085020.1 MGP_WSBEiJ_G0032106.1 mouse_genomes_project 7 129449186 129456610 - Nsmce1 protein_coding processed_transcript MGP_WSBEiJ_T0008752.1 MGP_WSBEiJ_G0007073.1 mouse_genomes_project 7 69354104 69368614 - Gm16158 lincRNA lincRNA MGP_WSBEiJ_T0008753.1 MGP_WSBEiJ_G0007073.1 mouse_genomes_project 7 69354104 69368633 - Gm16158 lincRNA lincRNA MGP_WSBEiJ_T0081590.1 MGP_WSBEiJ_G0031161.1 mouse_genomes_project 7 29142451 29144941 - MGP_WSBEiJ_P0081590 Sdhaf1 protein_coding protein_coding MGP_WSBEiJ_T0084036.1 MGP_WSBEiJ_G0031741.1 mouse_genomes_project 7 104776809 104821378 - MGP_WSBEiJ_P0084036 Rnf121 protein_coding protein_coding MGP_WSBEiJ_T0084037.1 MGP_WSBEiJ_G0031741.1 mouse_genomes_project 7 104777049 104825963 - MGP_WSBEiJ_P0084037 Rnf121 protein_coding protein_coding MGP_WSBEiJ_T0084038.1 MGP_WSBEiJ_G0031741.1 mouse_genomes_project 7 104777110 104781435 - Rnf121 protein_coding retained_intron MGP_WSBEiJ_T0084039.1 MGP_WSBEiJ_G0031741.1 mouse_genomes_project 7 104786896 104825952 - MGP_WSBEiJ_P0084039 Rnf121 protein_coding protein_coding MGP_WSBEiJ_T0084040.1 MGP_WSBEiJ_G0031741.1 mouse_genomes_project 7 104793198 104825993 - Rnf121 protein_coding processed_transcript MGP_WSBEiJ_T0084041.1 MGP_WSBEiJ_G0031741.1 mouse_genomes_project 7 104797434 104825879 - MGP_WSBEiJ_P0084041 Rnf121 protein_coding protein_coding MGP_WSBEiJ_T0096843.1 MGP_WSBEiJ_G0035524.1 mouse_genomes_project 7 104577738 104578358 + pseudogene pseudogene MGP_WSBEiJ_T0081289.1 MGP_WSBEiJ_G0031091.1 mouse_genomes_project 7 26990922 26993425 - MGP_WSBEiJ_P0081289 Zfp36 protein_coding protein_coding MGP_WSBEiJ_T0081685.1 MGP_WSBEiJ_G0031181.1 mouse_genomes_project 7 29455198 29464948 - MGP_WSBEiJ_P0081685 Cox6b1 protein_coding protein_coding MGP_WSBEiJ_T0015224.1 MGP_WSBEiJ_G0013354.1 mouse_genomes_project 7 10790581 10790903 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017834.1 MGP_WSBEiJ_G0015121.1 mouse_genomes_project 7 146316743 146320865 - Gm10575 processed_transcript processed_transcript MGP_WSBEiJ_T0017835.1 MGP_WSBEiJ_G0015121.1 mouse_genomes_project 7 146316745 146323128 - Gm10575 processed_transcript processed_transcript MGP_WSBEiJ_T0017836.1 MGP_WSBEiJ_G0015121.1 mouse_genomes_project 7 146317182 146319213 - Gm10575 processed_transcript processed_transcript MGP_WSBEiJ_T0008660.1 MGP_WSBEiJ_G0007001.1 mouse_genomes_project 7 10237963 10240523 + Gm29638 lincRNA lincRNA MGP_WSBEiJ_T0008658.1 MGP_WSBEiJ_G0007000.1 mouse_genomes_project 7 10226271 10240404 - 1810019N24Rik lincRNA lincRNA MGP_WSBEiJ_T0008659.1 MGP_WSBEiJ_G0007000.1 mouse_genomes_project 7 10227369 10227746 - 1810019N24Rik lincRNA lincRNA MGP_WSBEiJ_T0015243.1 MGP_WSBEiJ_G0013373.1 mouse_genomes_project 7 17898312 17898885 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084592.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116080771 116320954 + MGP_WSBEiJ_P0084592 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084593.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116080808 116314098 + MGP_WSBEiJ_P0084593 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084594.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116080961 116251040 + Tead1 protein_coding retained_intron MGP_WSBEiJ_T0084595.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116147151 116312768 + MGP_WSBEiJ_P0084595 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084596.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116161447 116312768 + MGP_WSBEiJ_P0084596 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084597.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116164429 116215911 + Tead1 protein_coding processed_transcript MGP_WSBEiJ_T0084598.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116164480 116312768 + MGP_WSBEiJ_P0084598 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084599.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116164525 116312768 + MGP_WSBEiJ_P0084599 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084600.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116164525 116312768 + MGP_WSBEiJ_P0084600 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084601.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116164525 116312768 + MGP_WSBEiJ_P0084601 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084602.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116164578 116271929 + MGP_WSBEiJ_P0084602 Tead1 protein_coding protein_coding MGP_WSBEiJ_T0084603.1 MGP_WSBEiJ_G0032010.1 mouse_genomes_project 7 116164588 116251019 + Tead1 protein_coding retained_intron MGP_WSBEiJ_T0015295.1 MGP_WSBEiJ_G0013425.1 mouse_genomes_project 7 43044575 43045059 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002259.1 MGP_WSBEiJ_G0002177.1 mouse_genomes_project 7 129041374 129043840 - TEC TEC MGP_WSBEiJ_T0085153.1 MGP_WSBEiJ_G0032127.1 mouse_genomes_project 7 130616520 130622446 - MGP_WSBEiJ_P0085153 Il27 protein_coding protein_coding MGP_WSBEiJ_T0084277.1 MGP_WSBEiJ_G0031895.1 mouse_genomes_project 7 108348773 108350376 - MGP_WSBEiJ_P0084277 Prkcdbp protein_coding protein_coding MGP_WSBEiJ_T0002164.1 MGP_WSBEiJ_G0002083.1 mouse_genomes_project 7 36166373 36167295 + TEC TEC MGP_WSBEiJ_T0015261.1 MGP_WSBEiJ_G0013391.1 mouse_genomes_project 7 25275862 25296912 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097457.1 MGP_WSBEiJ_G0036127.1 mouse_genomes_project 7 73357741 73358781 - sense_intronic sense_intronic MGP_WSBEiJ_T0086034.1 MGP_WSBEiJ_G0032307.1 mouse_genomes_project 7 144871058 144872114 + MGP_WSBEiJ_P0086034 Olfr523 protein_coding protein_coding MGP_WSBEiJ_T0008778.1 MGP_WSBEiJ_G0007095.1 mouse_genomes_project 7 75075040 75085062 + lincRNA lincRNA MGP_WSBEiJ_T0010716.1 MGP_WSBEiJ_G0008873.1 mouse_genomes_project 7 65846752 65846830 - Gm25249 miRNA miRNA MGP_WSBEiJ_T0085331.1 MGP_WSBEiJ_G0032155.1 mouse_genomes_project 7 131073068 131076744 - MGP_WSBEiJ_P0085331 Prrt2 protein_coding protein_coding MGP_WSBEiJ_T0085332.1 MGP_WSBEiJ_G0032155.1 mouse_genomes_project 7 131073080 131076507 - Prrt2 protein_coding retained_intron MGP_WSBEiJ_T0085333.1 MGP_WSBEiJ_G0032155.1 mouse_genomes_project 7 131073185 131075435 - MGP_WSBEiJ_P0085333 Prrt2 protein_coding protein_coding MGP_WSBEiJ_T0085334.1 MGP_WSBEiJ_G0032155.1 mouse_genomes_project 7 131073690 131075128 - MGP_WSBEiJ_P0085334 Prrt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085335.1 MGP_WSBEiJ_G0032155.1 mouse_genomes_project 7 131074039 131076489 - Prrt2 protein_coding processed_transcript MGP_WSBEiJ_T0085336.1 MGP_WSBEiJ_G0032155.1 mouse_genomes_project 7 131074236 131076670 - MGP_WSBEiJ_P0085336 Prrt2 protein_coding protein_coding MGP_WSBEiJ_T0085337.1 MGP_WSBEiJ_G0032155.1 mouse_genomes_project 7 131074927 131075888 - Prrt2 protein_coding processed_transcript MGP_WSBEiJ_T0080528.1 MGP_WSBEiJ_G0030875.1 mouse_genomes_project 7 14667263 14672069 + MGP_WSBEiJ_P0080528 Ccdc8 protein_coding protein_coding MGP_WSBEiJ_T0017739.1 MGP_WSBEiJ_G0015081.1 mouse_genomes_project 7 26229924 26233120 - Gm44684 processed_transcript processed_transcript MGP_WSBEiJ_T0081850.1 MGP_WSBEiJ_G0031212.1 mouse_genomes_project 7 30252435 30253503 + MGP_WSBEiJ_P0081850 Scgb2b2 protein_coding protein_coding MGP_WSBEiJ_T0017818.1 MGP_WSBEiJ_G0015111.1 mouse_genomes_project 7 130941726 130947313 + Gm20650 processed_transcript processed_transcript MGP_WSBEiJ_T0084117.1 MGP_WSBEiJ_G0031773.1 mouse_genomes_project 7 105659304 105660255 + MGP_WSBEiJ_P0084117 Olfr568 protein_coding protein_coding MGP_WSBEiJ_T0002262.1 MGP_WSBEiJ_G0002180.1 mouse_genomes_project 7 130410467 130412355 + TEC TEC MGP_WSBEiJ_T0086101.1 MGP_WSBEiJ_G0032339.1 mouse_genomes_project 7 145721647 145727905 + MGP_WSBEiJ_P0086101 Athl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086102.1 MGP_WSBEiJ_G0032339.1 mouse_genomes_project 7 145721816 145727907 + Athl1 protein_coding retained_intron MGP_WSBEiJ_T0086103.1 MGP_WSBEiJ_G0032339.1 mouse_genomes_project 7 145721821 145723363 + Athl1 protein_coding processed_transcript MGP_WSBEiJ_T0086104.1 MGP_WSBEiJ_G0032339.1 mouse_genomes_project 7 145721831 145727913 + MGP_WSBEiJ_P0086104 Athl1 protein_coding protein_coding MGP_WSBEiJ_T0086105.1 MGP_WSBEiJ_G0032339.1 mouse_genomes_project 7 145722560 145727092 + MGP_WSBEiJ_P0086105 Athl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086106.1 MGP_WSBEiJ_G0032339.1 mouse_genomes_project 7 145722786 145727909 + MGP_WSBEiJ_P0086106 Athl1 protein_coding protein_coding MGP_WSBEiJ_T0081890.1 MGP_WSBEiJ_G0031224.1 mouse_genomes_project 7 33515006 33565450 - MGP_WSBEiJ_P0081890 4931406P16Rik protein_coding protein_coding MGP_WSBEiJ_T0081891.1 MGP_WSBEiJ_G0031224.1 mouse_genomes_project 7 33515198 33521300 - MGP_WSBEiJ_P0081891 4931406P16Rik protein_coding protein_coding MGP_WSBEiJ_T0081892.1 MGP_WSBEiJ_G0031224.1 mouse_genomes_project 7 33516199 33521111 - 4931406P16Rik protein_coding retained_intron MGP_WSBEiJ_T0081894.1 MGP_WSBEiJ_G0031224.1 mouse_genomes_project 7 33533341 33536521 - 4931406P16Rik protein_coding retained_intron MGP_WSBEiJ_T0081895.1 MGP_WSBEiJ_G0031224.1 mouse_genomes_project 7 33564211 33595123 - 4931406P16Rik protein_coding retained_intron MGP_WSBEiJ_T0081896.1 MGP_WSBEiJ_G0031224.1 mouse_genomes_project 7 33565730 33595118 - 4931406P16Rik protein_coding processed_transcript MGP_WSBEiJ_T0081897.1 MGP_WSBEiJ_G0031224.1 mouse_genomes_project 7 33565816 33587086 - 4931406P16Rik protein_coding processed_transcript MGP_WSBEiJ_T0081898.1 MGP_WSBEiJ_G0031224.1 mouse_genomes_project 7 33593639 33595081 - 4931406P16Rik protein_coding processed_transcript MGP_WSBEiJ_T0015425.1 MGP_WSBEiJ_G0013555.1 mouse_genomes_project 7 144455797 144456208 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0081455.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28079837 28290682 - MGP_WSBEiJ_P0081455 Sipa1l3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0081456.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28079843 28139724 - MGP_WSBEiJ_P0081456 Sipa1l3 protein_coding protein_coding MGP_WSBEiJ_T0081457.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28079849 28113422 - Sipa1l3 protein_coding retained_intron MGP_WSBEiJ_T0081458.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28079849 28277135 - MGP_WSBEiJ_P0081458 Sipa1l3 protein_coding protein_coding MGP_WSBEiJ_T0081459.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28079849 28277135 - MGP_WSBEiJ_P0081459 Sipa1l3 protein_coding protein_coding MGP_WSBEiJ_T0081460.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28080803 28113344 - Sipa1l3 protein_coding retained_intron MGP_WSBEiJ_T0081461.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28081296 28088168 - MGP_WSBEiJ_P0081461 Sipa1l3 protein_coding protein_coding MGP_WSBEiJ_T0081462.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28081587 28129940 - MGP_WSBEiJ_P0081462 Sipa1l3 protein_coding protein_coding MGP_WSBEiJ_T0081463.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28082871 28101032 - Sipa1l3 protein_coding retained_intron MGP_WSBEiJ_T0081464.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28090264 28098224 - Sipa1l3 protein_coding retained_intron MGP_WSBEiJ_T0081465.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28127711 28129413 - Sipa1l3 protein_coding retained_intron MGP_WSBEiJ_T0081466.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28128831 28129948 - MGP_WSBEiJ_P0081466 Sipa1l3 protein_coding protein_coding MGP_WSBEiJ_T0081467.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28132905 28139864 - Sipa1l3 protein_coding retained_intron MGP_WSBEiJ_T0081468.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28146361 28277127 - Sipa1l3 protein_coding processed_transcript MGP_WSBEiJ_T0081469.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28164662 28290297 - MGP_WSBEiJ_P0081469 Sipa1l3 protein_coding protein_coding MGP_WSBEiJ_T0081470.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28164767 28290326 - Sipa1l3 protein_coding processed_transcript MGP_WSBEiJ_T0081471.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28164840 28290300 - Sipa1l3 protein_coding processed_transcript MGP_WSBEiJ_T0081472.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28266579 28290245 - Sipa1l3 protein_coding processed_transcript MGP_WSBEiJ_T0081473.1 MGP_WSBEiJ_G0031131.1 mouse_genomes_project 7 28288455 28290240 - Sipa1l3 protein_coding processed_transcript MGP_WSBEiJ_T0082746.1 MGP_WSBEiJ_G0031449.1 mouse_genomes_project 7 50503000 50517837 + MGP_WSBEiJ_P0082746 Htatip2 protein_coding protein_coding MGP_WSBEiJ_T0082747.1 MGP_WSBEiJ_G0031449.1 mouse_genomes_project 7 50503047 50517841 + MGP_WSBEiJ_P0082747 Htatip2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0082699.1 MGP_WSBEiJ_G0031432.1 mouse_genomes_project 7 47526681 47530811 + MGP_WSBEiJ_P0082699 Tmem86a protein_coding protein_coding MGP_WSBEiJ_T0080141.1 MGP_WSBEiJ_G0030727.1 mouse_genomes_project 7 1767149 1777669 - MGP_WSBEiJ_P0080141 Shisa7 protein_coding protein_coding MGP_WSBEiJ_T0080142.1 MGP_WSBEiJ_G0030727.1 mouse_genomes_project 7 1767150 1786396 - MGP_WSBEiJ_P0080142 Shisa7 protein_coding protein_coding MGP_WSBEiJ_T0080143.1 MGP_WSBEiJ_G0030727.1 mouse_genomes_project 7 1769625 1786396 - MGP_WSBEiJ_P0080143 Shisa7 protein_coding protein_coding MGP_WSBEiJ_T0080144.1 MGP_WSBEiJ_G0030727.1 mouse_genomes_project 7 1771775 1772731 - Shisa7 protein_coding retained_intron MGP_WSBEiJ_T0080145.1 MGP_WSBEiJ_G0030727.1 mouse_genomes_project 7 1772994 1776010 - Shisa7 protein_coding retained_intron MGP_WSBEiJ_T0017837.1 MGP_WSBEiJ_G0015122.1 mouse_genomes_project 7 146818555 146819350 - processed_transcript processed_transcript MGP_WSBEiJ_T0083718.1 MGP_WSBEiJ_G0031674.1 mouse_genomes_project 7 100202157 100216804 - MGP_WSBEiJ_P0083718 Aqp11 protein_coding protein_coding MGP_WSBEiJ_T0083719.1 MGP_WSBEiJ_G0031674.1 mouse_genomes_project 7 100204530 100216453 - MGP_WSBEiJ_P0083719 Aqp11 protein_coding protein_coding MGP_WSBEiJ_T0083720.1 MGP_WSBEiJ_G0031674.1 mouse_genomes_project 7 100204698 100207540 - Aqp11 protein_coding retained_intron MGP_WSBEiJ_T0083721.1 MGP_WSBEiJ_G0031674.1 mouse_genomes_project 7 100205581 100211379 - Aqp11 protein_coding retained_intron MGP_WSBEiJ_T0083722.1 MGP_WSBEiJ_G0031674.1 mouse_genomes_project 7 100207202 100208657 - Aqp11 protein_coding processed_transcript MGP_WSBEiJ_T0084740.1 MGP_WSBEiJ_G0032037.1 mouse_genomes_project 7 122146817 122153625 - MGP_WSBEiJ_P0084740 Itpripl2 protein_coding protein_coding MGP_WSBEiJ_T0081236.1 MGP_WSBEiJ_G0031074.1 mouse_genomes_project 7 26499506 26531844 - MGP_WSBEiJ_P0081236 Zfp974 protein_coding protein_coding MGP_WSBEiJ_T0008874.1 MGP_WSBEiJ_G0007153.1 mouse_genomes_project 7 130847010 130856636 - lincRNA lincRNA MGP_WSBEiJ_T0083167.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80599762 80609719 - Mfge8 protein_coding retained_intron MGP_WSBEiJ_T0083168.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80599762 80615009 - MGP_WSBEiJ_P0083168 Mfge8 protein_coding protein_coding MGP_WSBEiJ_T0083169.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80599763 80615016 - MGP_WSBEiJ_P0083169 Mfge8 protein_coding protein_coding MGP_WSBEiJ_T0083170.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80600110 80614987 - MGP_WSBEiJ_P0083170 Mfge8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083171.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80600133 80602994 - Mfge8 protein_coding retained_intron MGP_WSBEiJ_T0083172.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80602501 80608740 - Mfge8 protein_coding retained_intron MGP_WSBEiJ_T0083173.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80607810 80608983 - Mfge8 protein_coding retained_intron MGP_WSBEiJ_T0083174.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80608801 80613503 - Mfge8 protein_coding processed_transcript MGP_WSBEiJ_T0083175.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80610856 80614945 - Mfge8 protein_coding retained_intron MGP_WSBEiJ_T0083176.1 MGP_WSBEiJ_G0031535.1 mouse_genomes_project 7 80611270 80614174 - Mfge8 protein_coding processed_transcript MGP_WSBEiJ_T0011490.1 MGP_WSBEiJ_G0009647.1 mouse_genomes_project 7 93412147 93412356 - Gm27660 misc_RNA misc_RNA MGP_WSBEiJ_T0005220.1 MGP_WSBEiJ_G0004426.1 mouse_genomes_project 7 132376271 132382244 - Gm44850 antisense antisense MGP_WSBEiJ_T0008860.1 MGP_WSBEiJ_G0007143.1 mouse_genomes_project 7 125410315 125412004 + 1700025J12Rik lincRNA lincRNA MGP_WSBEiJ_T0008732.1 MGP_WSBEiJ_G0007060.1 mouse_genomes_project 7 64836415 64841889 + Gm45052 lincRNA lincRNA MGP_WSBEiJ_T0084141.1 MGP_WSBEiJ_G0031795.1 mouse_genomes_project 7 106135741 106136686 - MGP_WSBEiJ_P0084141 Olfr600 protein_coding protein_coding MGP_WSBEiJ_T0010684.1 MGP_WSBEiJ_G0008841.1 mouse_genomes_project 7 44705206 44705271 + Mir7052 miRNA miRNA MGP_WSBEiJ_T0081067.1 MGP_WSBEiJ_G0031028.1 mouse_genomes_project 7 24151159 24166623 - MGP_WSBEiJ_P0081067 Cyp2s1 protein_coding protein_coding MGP_WSBEiJ_T0081068.1 MGP_WSBEiJ_G0031028.1 mouse_genomes_project 7 24151159 24166883 - MGP_WSBEiJ_P0081068 Cyp2s1 protein_coding protein_coding MGP_WSBEiJ_T0081069.1 MGP_WSBEiJ_G0031028.1 mouse_genomes_project 7 24152832 24166528 - Cyp2s1 protein_coding retained_intron MGP_WSBEiJ_T0081070.1 MGP_WSBEiJ_G0031028.1 mouse_genomes_project 7 24158004 24165364 - MGP_WSBEiJ_P0081070 Cyp2s1 protein_coding protein_coding MGP_WSBEiJ_T0008801.1 MGP_WSBEiJ_G0007109.1 mouse_genomes_project 7 81867259 81869147 - 6330403N20Rik lincRNA lincRNA MGP_WSBEiJ_T0005170.1 MGP_WSBEiJ_G0004392.1 mouse_genomes_project 7 95102672 95109966 - 4632427E13Rik antisense antisense MGP_WSBEiJ_T0005171.1 MGP_WSBEiJ_G0004392.1 mouse_genomes_project 7 95106143 95109975 - 4632427E13Rik antisense antisense MGP_WSBEiJ_T0005172.1 MGP_WSBEiJ_G0004392.1 mouse_genomes_project 7 95106164 95109975 - 4632427E13Rik antisense antisense MGP_WSBEiJ_T0005173.1 MGP_WSBEiJ_G0004392.1 mouse_genomes_project 7 95109212 95109966 - 4632427E13Rik antisense antisense MGP_WSBEiJ_T0081851.1 MGP_WSBEiJ_G0031213.1 mouse_genomes_project 7 30305661 30308558 - MGP_WSBEiJ_P0081851 Scgb2b3 protein_coding protein_coding MGP_WSBEiJ_T0082777.1 MGP_WSBEiJ_G0031460.1 mouse_genomes_project 7 52848904 52854110 - MGP_WSBEiJ_P0082777 1700015G11Rik protein_coding protein_coding MGP_WSBEiJ_T0082778.1 MGP_WSBEiJ_G0031460.1 mouse_genomes_project 7 52848906 52854085 - MGP_WSBEiJ_P0082778 1700015G11Rik protein_coding protein_coding MGP_WSBEiJ_T0082779.1 MGP_WSBEiJ_G0031460.1 mouse_genomes_project 7 52848908 52854077 - MGP_WSBEiJ_P0082779 1700015G11Rik protein_coding protein_coding MGP_WSBEiJ_T0082780.1 MGP_WSBEiJ_G0031460.1 mouse_genomes_project 7 52848911 52854064 - MGP_WSBEiJ_P0082780 1700015G11Rik protein_coding protein_coding MGP_WSBEiJ_T0081485.1 MGP_WSBEiJ_G0031137.1 mouse_genomes_project 7 28649241 28665954 + MGP_WSBEiJ_P0081485 Zfp420 protein_coding protein_coding MGP_WSBEiJ_T0081486.1 MGP_WSBEiJ_G0031137.1 mouse_genomes_project 7 28649266 28650876 + Zfp420 protein_coding retained_intron MGP_WSBEiJ_T0081487.1 MGP_WSBEiJ_G0031137.1 mouse_genomes_project 7 28649273 28666741 + Zfp420 protein_coding processed_transcript MGP_WSBEiJ_T0081488.1 MGP_WSBEiJ_G0031137.1 mouse_genomes_project 7 28649303 28666276 + MGP_WSBEiJ_P0081488 Zfp420 protein_coding protein_coding MGP_WSBEiJ_T0081489.1 MGP_WSBEiJ_G0031137.1 mouse_genomes_project 7 28661969 28663985 + Zfp420 protein_coding retained_intron MGP_WSBEiJ_T0085937.1 MGP_WSBEiJ_G0032283.1 mouse_genomes_project 7 143563882 143692395 + MGP_WSBEiJ_P0085937 Jakmip3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0085938.1 MGP_WSBEiJ_G0032283.1 mouse_genomes_project 7 143564134 143673545 + MGP_WSBEiJ_P0085938 Jakmip3 protein_coding protein_coding MGP_WSBEiJ_T0085939.1 MGP_WSBEiJ_G0032283.1 mouse_genomes_project 7 143564154 143673539 + MGP_WSBEiJ_P0085939 Jakmip3 protein_coding protein_coding MGP_WSBEiJ_T0085940.1 MGP_WSBEiJ_G0032283.1 mouse_genomes_project 7 143689282 143709987 + MGP_WSBEiJ_P0085940 Jakmip3 protein_coding protein_coding MGP_WSBEiJ_T0081423.1 MGP_WSBEiJ_G0031122.1 mouse_genomes_project 7 27897709 27901429 + MGP_WSBEiJ_P0081423 Ggn protein_coding protein_coding MGP_WSBEiJ_T0081424.1 MGP_WSBEiJ_G0031122.1 mouse_genomes_project 7 27897879 27901408 + MGP_WSBEiJ_P0081424 Ggn protein_coding protein_coding MGP_WSBEiJ_T0085409.1 MGP_WSBEiJ_G0032173.1 mouse_genomes_project 7 131495312 131496815 - MGP_WSBEiJ_P0085409 E430018J23Rik protein_coding protein_coding MGP_WSBEiJ_T0085094.1 MGP_WSBEiJ_G0032118.1 mouse_genomes_project 7 130446459 130466759 + Rabep2 protein_coding retained_intron MGP_WSBEiJ_T0085095.1 MGP_WSBEiJ_G0032118.1 mouse_genomes_project 7 130446774 130466767 + MGP_WSBEiJ_P0085095 Rabep2 protein_coding protein_coding MGP_WSBEiJ_T0085096.1 MGP_WSBEiJ_G0032118.1 mouse_genomes_project 7 130446799 130454860 + Rabep2 protein_coding retained_intron MGP_WSBEiJ_T0085097.1 MGP_WSBEiJ_G0032118.1 mouse_genomes_project 7 130447082 130457145 + MGP_WSBEiJ_P0085097 Rabep2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085098.1 MGP_WSBEiJ_G0032118.1 mouse_genomes_project 7 130447128 130457136 + MGP_WSBEiJ_P0085098 Rabep2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085099.1 MGP_WSBEiJ_G0032118.1 mouse_genomes_project 7 130456904 130457468 + Rabep2 protein_coding retained_intron MGP_WSBEiJ_T0085100.1 MGP_WSBEiJ_G0032118.1 mouse_genomes_project 7 130459021 130465542 + Rabep2 protein_coding retained_intron MGP_WSBEiJ_T0085101.1 MGP_WSBEiJ_G0032118.1 mouse_genomes_project 7 130465657 130470103 + Rabep2 protein_coding retained_intron MGP_WSBEiJ_T0010754.1 MGP_WSBEiJ_G0008911.1 mouse_genomes_project 7 147529460 147529544 - Mir675 miRNA miRNA MGP_WSBEiJ_T0098490.1 MGP_WSBEiJ_G0037153.1 mouse_genomes_project 7 79324031 79324212 - Gm23239 snRNA snRNA MGP_WSBEiJ_T0101086.1 MGP_WSBEiJ_G0039543.1 mouse_genomes_project 7 87909073 87909381 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0085615.1 MGP_WSBEiJ_G0032213.1 mouse_genomes_project 7 132366175 132367128 - MGP_WSBEiJ_P0085615 Cox6a2 protein_coding protein_coding MGP_WSBEiJ_T0015422.1 MGP_WSBEiJ_G0013552.1 mouse_genomes_project 7 140460365 140461351 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0079974.1 MGP_WSBEiJ_G0030697.1 mouse_genomes_project 7 591508 595185 - MGP_WSBEiJ_P0079974 protein_coding unknown_likely_coding MGP_WSBEiJ_T0079975.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 918709 973332 - MGP_WSBEiJ_P0079975 Lair1 protein_coding protein_coding MGP_WSBEiJ_T0079976.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 922043 973357 - MGP_WSBEiJ_P0079976 Lair1 protein_coding protein_coding MGP_WSBEiJ_T0079977.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 923029 973327 - MGP_WSBEiJ_P0079977 Lair1 protein_coding protein_coding MGP_WSBEiJ_T0079978.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 923950 973314 - MGP_WSBEiJ_P0079978 Lair1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079979.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 923977 973292 - MGP_WSBEiJ_P0079979 Lair1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079980.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 924137 938545 - Lair1 protein_coding processed_transcript MGP_WSBEiJ_T0079981.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 924543 973269 - MGP_WSBEiJ_P0079981 Lair1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0079982.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 924633 973294 - MGP_WSBEiJ_P0079982 Lair1 protein_coding protein_coding MGP_WSBEiJ_T0079983.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 924633 973294 - MGP_WSBEiJ_P0079983 Lair1 protein_coding protein_coding MGP_WSBEiJ_T0079984.1 MGP_WSBEiJ_G0030698.1 mouse_genomes_project 7 938699 973301 - Lair1 protein_coding processed_transcript MGP_WSBEiJ_T0084179.1 MGP_WSBEiJ_G0031833.1 mouse_genomes_project 7 106868013 107008788 - MGP_WSBEiJ_P0084179 protein_coding protein_coding MGP_WSBEiJ_T0015313.1 MGP_WSBEiJ_G0013443.1 mouse_genomes_project 7 56530530 56530888 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015293.1 MGP_WSBEiJ_G0013423.1 mouse_genomes_project 7 42729028 42729539 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0083531.1 MGP_WSBEiJ_G0031616.1 mouse_genomes_project 7 88415807 88416863 - MGP_WSBEiJ_P0083531 Olfr308 protein_coding protein_coding MGP_WSBEiJ_T0081362.1 MGP_WSBEiJ_G0031111.1 mouse_genomes_project 7 27517322 27524114 + Ech1 protein_coding retained_intron MGP_WSBEiJ_T0081363.1 MGP_WSBEiJ_G0031111.1 mouse_genomes_project 7 27517322 27526217 + MGP_WSBEiJ_P0081363 Ech1 protein_coding protein_coding MGP_WSBEiJ_T0081364.1 MGP_WSBEiJ_G0031111.1 mouse_genomes_project 7 27517454 27518763 + Ech1 protein_coding retained_intron MGP_WSBEiJ_T0081365.1 MGP_WSBEiJ_G0031111.1 mouse_genomes_project 7 27518063 27525205 + Ech1 protein_coding processed_transcript MGP_WSBEiJ_T0081366.1 MGP_WSBEiJ_G0031111.1 mouse_genomes_project 7 27518309 27526217 + MGP_WSBEiJ_P0081366 Ech1 protein_coding protein_coding MGP_WSBEiJ_T0081367.1 MGP_WSBEiJ_G0031111.1 mouse_genomes_project 7 27524122 27526217 + Ech1 protein_coding retained_intron MGP_WSBEiJ_T0081368.1 MGP_WSBEiJ_G0031111.1 mouse_genomes_project 7 27525222 27526217 + Ech1 protein_coding retained_intron MGP_WSBEiJ_T0008779.1 MGP_WSBEiJ_G0007096.1 mouse_genomes_project 7 75302880 75313268 - Gm45004 lincRNA lincRNA MGP_WSBEiJ_T0015250.1 MGP_WSBEiJ_G0013380.1 mouse_genomes_project 7 23085957 23086473 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082435.1 MGP_WSBEiJ_G0031365.1 mouse_genomes_project 7 45623963 45658870 - MGP_WSBEiJ_P0082435 Trpm4 protein_coding protein_coding MGP_WSBEiJ_T0015348.1 MGP_WSBEiJ_G0013478.1 mouse_genomes_project 7 83108976 83109753 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015242.1 MGP_WSBEiJ_G0013372.1 mouse_genomes_project 7 16709413 16709983 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082367.1 MGP_WSBEiJ_G0031341.1 mouse_genomes_project 7 45266505 45277225 - MGP_WSBEiJ_P0082367 protein_coding protein_coding MGP_WSBEiJ_T0097462.1 MGP_WSBEiJ_G0036131.1 mouse_genomes_project 7 123214529 123216830 - Gm26967 sense_intronic sense_intronic MGP_WSBEiJ_T0081573.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29135859 29137710 + Syne4 protein_coding processed_transcript MGP_WSBEiJ_T0081574.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29135868 29140099 + MGP_WSBEiJ_P0081574 Syne4 protein_coding protein_coding MGP_WSBEiJ_T0081575.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29135923 29136762 + Syne4 protein_coding retained_intron MGP_WSBEiJ_T0081576.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29135932 29138144 + MGP_WSBEiJ_P0081576 Syne4 protein_coding protein_coding MGP_WSBEiJ_T0081577.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29135937 29137913 + Syne4 protein_coding retained_intron MGP_WSBEiJ_T0081578.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29135940 29138138 + MGP_WSBEiJ_P0081578 Syne4 protein_coding protein_coding MGP_WSBEiJ_T0081579.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29135968 29140099 + MGP_WSBEiJ_P0081579 Syne4 protein_coding protein_coding MGP_WSBEiJ_T0081580.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29136202 29137399 + Syne4 protein_coding retained_intron MGP_WSBEiJ_T0081581.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29136362 29138403 + Syne4 protein_coding retained_intron MGP_WSBEiJ_T0081582.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29137072 29137920 + Syne4 protein_coding retained_intron MGP_WSBEiJ_T0081583.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29137824 29140099 + Syne4 protein_coding retained_intron MGP_WSBEiJ_T0081584.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29137994 29140095 + MGP_WSBEiJ_P0081584 Syne4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081585.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29138039 29140098 + MGP_WSBEiJ_P0081585 Syne4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081586.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29138040 29140093 + MGP_WSBEiJ_P0081586 Syne4 protein_coding protein_coding MGP_WSBEiJ_T0081587.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29138072 29140097 + MGP_WSBEiJ_P0081587 Syne4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081588.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29138292 29140093 + Syne4 protein_coding retained_intron MGP_WSBEiJ_T0081589.1 MGP_WSBEiJ_G0031160.1 mouse_genomes_project 7 29138818 29140093 + Syne4 protein_coding retained_intron MGP_WSBEiJ_T0002232.1 MGP_WSBEiJ_G0002150.1 mouse_genomes_project 7 81003597 81003939 + TEC TEC MGP_WSBEiJ_T0081094.1 MGP_WSBEiJ_G0031038.1 mouse_genomes_project 7 25205939 25221663 + MGP_WSBEiJ_P0081094 Cyp2b19 protein_coding protein_coding MGP_WSBEiJ_T0081095.1 MGP_WSBEiJ_G0031038.1 mouse_genomes_project 7 25205960 25214675 + Cyp2b19 protein_coding retained_intron MGP_WSBEiJ_T0081096.1 MGP_WSBEiJ_G0031038.1 mouse_genomes_project 7 25215587 25220424 + Cyp2b19 protein_coding retained_intron MGP_WSBEiJ_T0002276.1 MGP_WSBEiJ_G0002194.1 mouse_genomes_project 7 148125189 148125248 + TEC TEC MGP_WSBEiJ_T0082016.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 36967763 36975567 - MGP_WSBEiJ_P0082016 Zfp536 protein_coding protein_coding MGP_WSBEiJ_T0082017.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 36974689 37278877 - MGP_WSBEiJ_P0082017 Zfp536 protein_coding protein_coding MGP_WSBEiJ_T0082018.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 36974694 37279218 - MGP_WSBEiJ_P0082018 Zfp536 protein_coding protein_coding MGP_WSBEiJ_T0082019.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 36974707 37280236 - MGP_WSBEiJ_P0082019 Zfp536 protein_coding protein_coding MGP_WSBEiJ_T0082020.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 36974762 37282068 - MGP_WSBEiJ_P0082020 Zfp536 protein_coding protein_coding MGP_WSBEiJ_T0082021.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 37067038 37280038 - MGP_WSBEiJ_P0082021 Zfp536 protein_coding protein_coding MGP_WSBEiJ_T0082022.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 37067168 37282836 - MGP_WSBEiJ_P0082022 Zfp536 protein_coding protein_coding MGP_WSBEiJ_T0082023.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 37212580 37282772 - Zfp536 protein_coding processed_transcript MGP_WSBEiJ_T0082024.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 37218816 37282757 - Zfp536 protein_coding retained_intron MGP_WSBEiJ_T0082025.1 MGP_WSBEiJ_G0031247.1 mouse_genomes_project 7 37281575 37282778 - Zfp536 protein_coding retained_intron MGP_WSBEiJ_T0083436.1 MGP_WSBEiJ_G0031582.1 mouse_genomes_project 7 83240750 83268119 + MGP_WSBEiJ_P0083436 Whamm protein_coding protein_coding MGP_WSBEiJ_T0083437.1 MGP_WSBEiJ_G0031582.1 mouse_genomes_project 7 83240780 83264137 + MGP_WSBEiJ_P0083437 Whamm protein_coding unknown_likely_coding MGP_WSBEiJ_T0082944.1 MGP_WSBEiJ_G0031494.1 mouse_genomes_project 7 66552774 66592852 + Tarsl2 protein_coding retained_intron MGP_WSBEiJ_T0082945.1 MGP_WSBEiJ_G0031494.1 mouse_genomes_project 7 66552774 66601129 + MGP_WSBEiJ_P0082945 Tarsl2 protein_coding protein_coding MGP_WSBEiJ_T0082946.1 MGP_WSBEiJ_G0031494.1 mouse_genomes_project 7 66566929 66570365 + Tarsl2 protein_coding retained_intron MGP_WSBEiJ_T0082947.1 MGP_WSBEiJ_G0031494.1 mouse_genomes_project 7 66587109 66599120 + Tarsl2 protein_coding processed_transcript MGP_WSBEiJ_T0085619.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132409317 132418158 + MGP_WSBEiJ_P0085619 protein_coding protein_coding MGP_WSBEiJ_T0085620.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132409424 132415863 + MGP_WSBEiJ_P0085620 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085621.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132409459 132416170 + MGP_WSBEiJ_P0085621 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085622.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132409459 132419819 + MGP_WSBEiJ_P0085622 protein_coding protein_coding MGP_WSBEiJ_T0085623.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132410481 132416170 + protein_coding retained_intron MGP_WSBEiJ_T0085624.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132410481 132416170 + protein_coding retained_intron MGP_WSBEiJ_T0085625.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132410481 132416170 + protein_coding retained_intron MGP_WSBEiJ_T0085626.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132410481 132416170 + protein_coding retained_intron MGP_WSBEiJ_T0085627.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132410481 132416170 + protein_coding retained_intron MGP_WSBEiJ_T0085628.1 MGP_WSBEiJ_G0032216.1 mouse_genomes_project 7 132410639 132415825 + MGP_WSBEiJ_P0085628 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083600.1 MGP_WSBEiJ_G0031649.1 mouse_genomes_project 7 92557686 92672251 + MGP_WSBEiJ_P0083600 Sytl2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0083601.1 MGP_WSBEiJ_G0031649.1 mouse_genomes_project 7 92609179 92672249 + MGP_WSBEiJ_P0083601 Sytl2 protein_coding protein_coding MGP_WSBEiJ_T0083602.1 MGP_WSBEiJ_G0031649.1 mouse_genomes_project 7 92609179 92672249 + MGP_WSBEiJ_P0083602 Sytl2 protein_coding protein_coding MGP_WSBEiJ_T0083603.1 MGP_WSBEiJ_G0031649.1 mouse_genomes_project 7 92609179 92672249 + MGP_WSBEiJ_P0083603 Sytl2 protein_coding protein_coding MGP_WSBEiJ_T0083604.1 MGP_WSBEiJ_G0031649.1 mouse_genomes_project 7 92609179 92672249 + MGP_WSBEiJ_P0083604 Sytl2 protein_coding protein_coding MGP_WSBEiJ_T0083605.1 MGP_WSBEiJ_G0031649.1 mouse_genomes_project 7 92641456 92672249 + Sytl2 protein_coding processed_transcript MGP_WSBEiJ_T0083606.1 MGP_WSBEiJ_G0031649.1 mouse_genomes_project 7 92641478 92672249 + Sytl2 protein_coding processed_transcript MGP_WSBEiJ_T0083607.1 MGP_WSBEiJ_G0031649.1 mouse_genomes_project 7 92659313 92672249 + Sytl2 protein_coding processed_transcript MGP_WSBEiJ_T0005081.1 MGP_WSBEiJ_G0004325.1 mouse_genomes_project 7 17678279 17684978 + Gm20512 antisense antisense MGP_WSBEiJ_T0084173.1 MGP_WSBEiJ_G0031827.1 mouse_genomes_project 7 106765030 106765954 - MGP_WSBEiJ_P0084173 Olfr64 protein_coding protein_coding MGP_WSBEiJ_T0085947.1 MGP_WSBEiJ_G0032285.1 mouse_genomes_project 7 143729627 143838140 - MGP_WSBEiJ_P0085947 Stk32c protein_coding protein_coding MGP_WSBEiJ_T0085948.1 MGP_WSBEiJ_G0032285.1 mouse_genomes_project 7 143729627 143811314 - MGP_WSBEiJ_P0085948 Stk32c protein_coding protein_coding MGP_WSBEiJ_T0082105.1 MGP_WSBEiJ_G0031270.1 mouse_genomes_project 7 43596089 43597341 + MGP_WSBEiJ_P0082105 Gm38999 protein_coding protein_coding MGP_WSBEiJ_T0082176.1 MGP_WSBEiJ_G0031296.1 mouse_genomes_project 7 44034565 44037898 + MGP_WSBEiJ_P0082176 Klk5 protein_coding protein_coding MGP_WSBEiJ_T0082177.1 MGP_WSBEiJ_G0031296.1 mouse_genomes_project 7 44034863 44043751 + MGP_WSBEiJ_P0082177 Klk5 protein_coding protein_coding MGP_WSBEiJ_T0100984.1 MGP_WSBEiJ_G0039441.1 mouse_genomes_project 7 11747632 11748203 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0081708.1 MGP_WSBEiJ_G0031190.1 mouse_genomes_project 7 29581733 29610394 + protein_coding processed_transcript MGP_WSBEiJ_T0081709.1 MGP_WSBEiJ_G0031190.1 mouse_genomes_project 7 29604219 29610402 + MGP_WSBEiJ_P0081709 protein_coding protein_coding MGP_WSBEiJ_T0081710.1 MGP_WSBEiJ_G0031190.1 mouse_genomes_project 7 29604223 29610402 + MGP_WSBEiJ_P0081710 protein_coding protein_coding MGP_WSBEiJ_T0081711.1 MGP_WSBEiJ_G0031190.1 mouse_genomes_project 7 29604307 29610402 + MGP_WSBEiJ_P0081711 protein_coding protein_coding MGP_WSBEiJ_T0081712.1 MGP_WSBEiJ_G0031190.1 mouse_genomes_project 7 29606899 29610394 + MGP_WSBEiJ_P0081712 protein_coding protein_coding MGP_WSBEiJ_T0083088.1 MGP_WSBEiJ_G0031520.1 mouse_genomes_project 7 74985155 75022112 + MGP_WSBEiJ_P0083088 Fam174b protein_coding protein_coding MGP_WSBEiJ_T0083089.1 MGP_WSBEiJ_G0031520.1 mouse_genomes_project 7 75010612 75020327 + MGP_WSBEiJ_P0083089 Fam174b protein_coding protein_coding MGP_WSBEiJ_T0083090.1 MGP_WSBEiJ_G0031520.1 mouse_genomes_project 7 75010668 75021211 + Fam174b protein_coding retained_intron MGP_WSBEiJ_T0083830.1 MGP_WSBEiJ_G0031702.1 mouse_genomes_project 7 102438902 102461609 - MGP_WSBEiJ_P0083830 Spcs2 protein_coding protein_coding MGP_WSBEiJ_T0083109.1 MGP_WSBEiJ_G0031525.1 mouse_genomes_project 7 77193629 77227270 + MGP_WSBEiJ_P0083109 Klhl25 protein_coding protein_coding MGP_WSBEiJ_T0083110.1 MGP_WSBEiJ_G0031525.1 mouse_genomes_project 7 77193657 77227269 + MGP_WSBEiJ_P0083110 Klhl25 protein_coding protein_coding MGP_WSBEiJ_T0083111.1 MGP_WSBEiJ_G0031525.1 mouse_genomes_project 7 77193660 77219147 + MGP_WSBEiJ_P0083111 Klhl25 protein_coding protein_coding MGP_WSBEiJ_T0083112.1 MGP_WSBEiJ_G0031525.1 mouse_genomes_project 7 77193683 77219143 + MGP_WSBEiJ_P0083112 Klhl25 protein_coding protein_coding MGP_WSBEiJ_T0083113.1 MGP_WSBEiJ_G0031525.1 mouse_genomes_project 7 77193716 77226664 + Klhl25 protein_coding processed_transcript MGP_WSBEiJ_T0083114.1 MGP_WSBEiJ_G0031525.1 mouse_genomes_project 7 77193760 77217283 + MGP_WSBEiJ_P0083114 Klhl25 protein_coding protein_coding MGP_WSBEiJ_T0005207.1 MGP_WSBEiJ_G0004415.1 mouse_genomes_project 7 125975453 125998301 - Gm15489 antisense antisense MGP_WSBEiJ_T0080266.1 MGP_WSBEiJ_G0030792.1 mouse_genomes_project 7 9191704 9192679 - MGP_WSBEiJ_P0080266 Vmn1r76 protein_coding protein_coding MGP_WSBEiJ_T0005104.1 MGP_WSBEiJ_G0004343.1 mouse_genomes_project 7 29285798 29290123 - Nphs1os antisense antisense MGP_WSBEiJ_T0005106.1 MGP_WSBEiJ_G0004345.1 mouse_genomes_project 7 29399412 29400032 - antisense antisense MGP_WSBEiJ_T0080223.1 MGP_WSBEiJ_G0030763.1 mouse_genomes_project 7 3561028 3595414 + MGP_WSBEiJ_P0080223 Smim17 protein_coding protein_coding MGP_WSBEiJ_T0080224.1 MGP_WSBEiJ_G0030763.1 mouse_genomes_project 7 3561061 3571513 + Smim17 protein_coding processed_transcript MGP_WSBEiJ_T0080226.1 MGP_WSBEiJ_G0030763.1 mouse_genomes_project 7 3580561 3598057 + MGP_WSBEiJ_P0080226 Smim17 protein_coding protein_coding MGP_WSBEiJ_T0085284.1 MGP_WSBEiJ_G0032145.1 mouse_genomes_project 7 130915803 130919025 - MGP_WSBEiJ_P0085284 Taok2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0085285.1 MGP_WSBEiJ_G0032145.1 mouse_genomes_project 7 130915806 130934816 - MGP_WSBEiJ_P0085285 Taok2 protein_coding protein_coding MGP_WSBEiJ_T0085286.1 MGP_WSBEiJ_G0032145.1 mouse_genomes_project 7 130916633 130917383 - Taok2 protein_coding retained_intron MGP_WSBEiJ_T0085287.1 MGP_WSBEiJ_G0032145.1 mouse_genomes_project 7 130919629 130934816 - MGP_WSBEiJ_P0085287 Taok2 protein_coding protein_coding MGP_WSBEiJ_T0085288.1 MGP_WSBEiJ_G0032145.1 mouse_genomes_project 7 130929907 130933070 - Taok2 protein_coding retained_intron MGP_WSBEiJ_T0085762.1 MGP_WSBEiJ_G0032236.1 mouse_genomes_project 7 135483269 135564482 + MGP_WSBEiJ_P0085762 5430419D17Rik protein_coding protein_coding MGP_WSBEiJ_T0085763.1 MGP_WSBEiJ_G0032236.1 mouse_genomes_project 7 135483288 135620306 + MGP_WSBEiJ_P0085763 5430419D17Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0085764.1 MGP_WSBEiJ_G0032236.1 mouse_genomes_project 7 135523753 135546527 + 5430419D17Rik protein_coding retained_intron MGP_WSBEiJ_T0084387.1 MGP_WSBEiJ_G0031927.1 mouse_genomes_project 7 110047916 110053322 - MGP_WSBEiJ_P0084387 Olfr711 protein_coding protein_coding MGP_WSBEiJ_T0101028.1 MGP_WSBEiJ_G0039485.1 mouse_genomes_project 7 34822206 34824878 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0082220.1 MGP_WSBEiJ_G0031313.1 mouse_genomes_project 7 44662829 44696221 + MGP_WSBEiJ_P0082220 Lrrc4b protein_coding protein_coding MGP_WSBEiJ_T0082221.1 MGP_WSBEiJ_G0031313.1 mouse_genomes_project 7 44677698 44698212 + MGP_WSBEiJ_P0082221 Lrrc4b protein_coding protein_coding MGP_WSBEiJ_T0082222.1 MGP_WSBEiJ_G0031313.1 mouse_genomes_project 7 44677950 44696267 + MGP_WSBEiJ_P0082222 Lrrc4b protein_coding protein_coding MGP_WSBEiJ_T0008819.1 MGP_WSBEiJ_G0007118.1 mouse_genomes_project 7 95374589 95481230 + Gm26862 lincRNA lincRNA MGP_WSBEiJ_T0081234.1 MGP_WSBEiJ_G0031072.1 mouse_genomes_project 7 26398092 26403212 + MGP_WSBEiJ_P0081234 Zfp626 protein_coding protein_coding MGP_WSBEiJ_T0080173.1 MGP_WSBEiJ_G0030744.1 mouse_genomes_project 7 2009150 2013204 + MGP_WSBEiJ_P0080173 Ccdc106 protein_coding protein_coding MGP_WSBEiJ_T0015409.1 MGP_WSBEiJ_G0013539.1 mouse_genomes_project 7 130853821 130854125 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0101105.1 MGP_WSBEiJ_G0039562.1 mouse_genomes_project 7 106458717 106459002 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084887.1 MGP_WSBEiJ_G0032076.1 mouse_genomes_project 7 124778893 124813060 + MGP_WSBEiJ_P0084887 Mfsd13b protein_coding protein_coding MGP_WSBEiJ_T0084888.1 MGP_WSBEiJ_G0032076.1 mouse_genomes_project 7 124778909 124787848 + MGP_WSBEiJ_P0084888 Mfsd13b protein_coding protein_coding MGP_WSBEiJ_T0084889.1 MGP_WSBEiJ_G0032076.1 mouse_genomes_project 7 124778912 124785462 + MGP_WSBEiJ_P0084889 Mfsd13b protein_coding protein_coding MGP_WSBEiJ_T0084890.1 MGP_WSBEiJ_G0032076.1 mouse_genomes_project 7 124788202 124813060 + MGP_WSBEiJ_P0084890 Mfsd13b protein_coding protein_coding MGP_WSBEiJ_T0080398.1 MGP_WSBEiJ_G0030841.1 mouse_genomes_project 7 13445355 13462690 + MGP_WSBEiJ_P0080398 protein_coding protein_coding MGP_WSBEiJ_T0080399.1 MGP_WSBEiJ_G0030841.1 mouse_genomes_project 7 13460195 13469251 + MGP_WSBEiJ_P0080399 protein_coding protein_coding MGP_WSBEiJ_T0080400.1 MGP_WSBEiJ_G0030841.1 mouse_genomes_project 7 13460242 13465139 + MGP_WSBEiJ_P0080400 protein_coding protein_coding MGP_WSBEiJ_T0080401.1 MGP_WSBEiJ_G0030841.1 mouse_genomes_project 7 13461478 13469153 + MGP_WSBEiJ_P0080401 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080402.1 MGP_WSBEiJ_G0030841.1 mouse_genomes_project 7 13466853 13469251 + MGP_WSBEiJ_P0080402 protein_coding protein_coding MGP_WSBEiJ_T0081249.1 MGP_WSBEiJ_G0031079.1 mouse_genomes_project 7 26690531 26693359 - MGP_WSBEiJ_P0081249 protein_coding protein_coding MGP_WSBEiJ_T0083883.1 MGP_WSBEiJ_G0031715.1 mouse_genomes_project 7 103150675 103165249 - MGP_WSBEiJ_P0083883 Dnajb13 protein_coding protein_coding MGP_WSBEiJ_T0083884.1 MGP_WSBEiJ_G0031715.1 mouse_genomes_project 7 103150678 103163686 - Dnajb13 protein_coding processed_transcript MGP_WSBEiJ_T0083885.1 MGP_WSBEiJ_G0031715.1 mouse_genomes_project 7 103150736 103162076 - Dnajb13 protein_coding processed_transcript MGP_WSBEiJ_T0080579.1 MGP_WSBEiJ_G0030897.1 mouse_genomes_project 7 16891952 16902453 + MGP_WSBEiJ_P0080579 Mypop protein_coding protein_coding MGP_WSBEiJ_T0080580.1 MGP_WSBEiJ_G0030897.1 mouse_genomes_project 7 16892026 16902455 + MGP_WSBEiJ_P0080580 Mypop protein_coding protein_coding MGP_WSBEiJ_T0080581.1 MGP_WSBEiJ_G0030897.1 mouse_genomes_project 7 16892676 16893808 + Mypop protein_coding retained_intron MGP_WSBEiJ_T0080836.1 MGP_WSBEiJ_G0030975.1 mouse_genomes_project 7 22503774 22520145 + MGP_WSBEiJ_P0080836 Kcnn4 protein_coding protein_coding MGP_WSBEiJ_T0080837.1 MGP_WSBEiJ_G0030975.1 mouse_genomes_project 7 22503810 22520141 + MGP_WSBEiJ_P0080837 Kcnn4 protein_coding protein_coding MGP_WSBEiJ_T0080838.1 MGP_WSBEiJ_G0030975.1 mouse_genomes_project 7 22503849 22519699 + MGP_WSBEiJ_P0080838 Kcnn4 protein_coding protein_coding MGP_WSBEiJ_T0080839.1 MGP_WSBEiJ_G0030975.1 mouse_genomes_project 7 22517131 22519729 + Kcnn4 protein_coding retained_intron MGP_WSBEiJ_T0080840.1 MGP_WSBEiJ_G0030975.1 mouse_genomes_project 7 22517993 22521643 + Kcnn4 protein_coding retained_intron MGP_WSBEiJ_T0096841.1 MGP_WSBEiJ_G0035522.1 mouse_genomes_project 7 83693314 83693931 + pseudogene pseudogene MGP_WSBEiJ_T0101064.1 MGP_WSBEiJ_G0039521.1 mouse_genomes_project 7 49101257 49101876 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080466.1 MGP_WSBEiJ_G0030858.1 mouse_genomes_project 7 14026387 14063818 + MGP_WSBEiJ_P0080466 Zc3h4 protein_coding protein_coding MGP_WSBEiJ_T0083827.1 MGP_WSBEiJ_G0031699.1 mouse_genomes_project 7 102326695 102327646 + MGP_WSBEiJ_P0083827 Olfr520 protein_coding protein_coding MGP_WSBEiJ_T0084439.1 MGP_WSBEiJ_G0031972.1 mouse_genomes_project 7 112103975 112104977 - MGP_WSBEiJ_P0084439 Olfr518 protein_coding protein_coding MGP_WSBEiJ_T0083438.1 MGP_WSBEiJ_G0031583.1 mouse_genomes_project 7 83281558 83391692 - MGP_WSBEiJ_P0083438 Homer2 protein_coding protein_coding MGP_WSBEiJ_T0002211.1 MGP_WSBEiJ_G0002130.1 mouse_genomes_project 7 74982783 74985878 - TEC TEC MGP_WSBEiJ_T0002212.1 MGP_WSBEiJ_G0002130.1 mouse_genomes_project 7 74983747 74985771 - TEC TEC MGP_WSBEiJ_T0015265.1 MGP_WSBEiJ_G0013395.1 mouse_genomes_project 7 30089943 30090730 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085859.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138096952 138119884 - Uros protein_coding retained_intron MGP_WSBEiJ_T0085860.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138097065 138119748 - MGP_WSBEiJ_P0085860 Uros protein_coding protein_coding MGP_WSBEiJ_T0085861.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138097065 138119859 - MGP_WSBEiJ_P0085861 Uros protein_coding protein_coding MGP_WSBEiJ_T0085862.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138097074 138120071 - MGP_WSBEiJ_P0085862 Uros protein_coding protein_coding MGP_WSBEiJ_T0085863.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138097670 138107746 - Uros protein_coding processed_transcript MGP_WSBEiJ_T0085864.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138102843 138119849 - MGP_WSBEiJ_P0085864 Uros protein_coding protein_coding MGP_WSBEiJ_T0085865.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138112660 138113438 - MGP_WSBEiJ_P0085865 Uros protein_coding protein_coding MGP_WSBEiJ_T0085866.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138112714 138119847 - MGP_WSBEiJ_P0085866 Uros protein_coding protein_coding MGP_WSBEiJ_T0085867.1 MGP_WSBEiJ_G0032261.1 mouse_genomes_project 7 138112716 138120868 - MGP_WSBEiJ_P0085867 Uros protein_coding protein_coding MGP_WSBEiJ_T0082067.1 MGP_WSBEiJ_G0031260.1 mouse_genomes_project 7 41364699 41402187 + protein_coding processed_transcript MGP_WSBEiJ_T0082068.1 MGP_WSBEiJ_G0031260.1 mouse_genomes_project 7 41364730 41418899 + MGP_WSBEiJ_P0082068 protein_coding protein_coding MGP_WSBEiJ_T0082069.1 MGP_WSBEiJ_G0031260.1 mouse_genomes_project 7 41364754 41393752 + protein_coding processed_transcript MGP_WSBEiJ_T0082070.1 MGP_WSBEiJ_G0031260.1 mouse_genomes_project 7 41364793 41403469 + MGP_WSBEiJ_P0082070 protein_coding protein_coding MGP_WSBEiJ_T0082072.1 MGP_WSBEiJ_G0031260.1 mouse_genomes_project 7 41402251 41403492 + protein_coding retained_intron MGP_WSBEiJ_T0082108.1 MGP_WSBEiJ_G0031273.1 mouse_genomes_project 7 43605543 43606720 + MGP_WSBEiJ_P0082108 Nkg7 protein_coding protein_coding MGP_WSBEiJ_T0082109.1 MGP_WSBEiJ_G0031273.1 mouse_genomes_project 7 43605600 43606717 + MGP_WSBEiJ_P0082109 Nkg7 protein_coding protein_coding MGP_WSBEiJ_T0082110.1 MGP_WSBEiJ_G0031273.1 mouse_genomes_project 7 43605974 43606720 + Nkg7 protein_coding retained_intron MGP_WSBEiJ_T0084541.1 MGP_WSBEiJ_G0032000.1 mouse_genomes_project 7 114189165 114201496 - MGP_WSBEiJ_P0084541 Lyve1 protein_coding protein_coding MGP_WSBEiJ_T0086139.1 MGP_WSBEiJ_G0032352.1 mouse_genomes_project 7 146025038 146029894 - MGP_WSBEiJ_P0086139 Hras protein_coding protein_coding MGP_WSBEiJ_T0086140.1 MGP_WSBEiJ_G0032352.1 mouse_genomes_project 7 146025867 146029938 - MGP_WSBEiJ_P0086140 Hras protein_coding protein_coding MGP_WSBEiJ_T0086141.1 MGP_WSBEiJ_G0032352.1 mouse_genomes_project 7 146026859 146029928 - Hras protein_coding retained_intron MGP_WSBEiJ_T0086142.1 MGP_WSBEiJ_G0032352.1 mouse_genomes_project 7 146026859 146029939 - MGP_WSBEiJ_P0086142 Hras protein_coding protein_coding MGP_WSBEiJ_T0086143.1 MGP_WSBEiJ_G0032352.1 mouse_genomes_project 7 146026860 146028438 - Hras protein_coding processed_transcript MGP_WSBEiJ_T0086144.1 MGP_WSBEiJ_G0032352.1 mouse_genomes_project 7 146026863 146027911 - Hras protein_coding processed_transcript MGP_WSBEiJ_T0086145.1 MGP_WSBEiJ_G0032352.1 mouse_genomes_project 7 146026863 146029816 - MGP_WSBEiJ_P0086145 Hras protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008728.1 MGP_WSBEiJ_G0007056.1 mouse_genomes_project 7 50602875 50604312 - Gm26856 lincRNA lincRNA MGP_WSBEiJ_T0086017.1 MGP_WSBEiJ_G0032302.1 mouse_genomes_project 7 144794858 144805084 - MGP_WSBEiJ_P0086017 Echs1 protein_coding protein_coding MGP_WSBEiJ_T0086018.1 MGP_WSBEiJ_G0032302.1 mouse_genomes_project 7 144794866 144804997 - Echs1 protein_coding retained_intron MGP_WSBEiJ_T0086019.1 MGP_WSBEiJ_G0032302.1 mouse_genomes_project 7 144795232 144802116 - MGP_WSBEiJ_P0086019 Echs1 protein_coding protein_coding MGP_WSBEiJ_T0086020.1 MGP_WSBEiJ_G0032302.1 mouse_genomes_project 7 144797874 144805023 - Echs1 protein_coding retained_intron MGP_WSBEiJ_T0086021.1 MGP_WSBEiJ_G0032302.1 mouse_genomes_project 7 144797874 144805023 - Echs1 protein_coding retained_intron MGP_WSBEiJ_T0086022.1 MGP_WSBEiJ_G0032302.1 mouse_genomes_project 7 144800848 144805015 - Echs1 protein_coding processed_transcript MGP_WSBEiJ_T0005178.1 MGP_WSBEiJ_G0004397.1 mouse_genomes_project 7 99285936 99290361 - Gm44633 antisense antisense MGP_WSBEiJ_T0082657.1 MGP_WSBEiJ_G0031421.1 mouse_genomes_project 7 47160520 47164950 - MGP_WSBEiJ_P0082657 Saa4 protein_coding protein_coding MGP_WSBEiJ_T0082913.1 MGP_WSBEiJ_G0031487.1 mouse_genomes_project 7 65239758 65266802 - MGP_WSBEiJ_P0082913 Fan1 protein_coding protein_coding MGP_WSBEiJ_T0082914.1 MGP_WSBEiJ_G0031487.1 mouse_genomes_project 7 65254315 65266098 - Fan1 protein_coding retained_intron MGP_WSBEiJ_T0082915.1 MGP_WSBEiJ_G0031487.1 mouse_genomes_project 7 65262866 65266817 - Fan1 protein_coding retained_intron MGP_WSBEiJ_T0082916.1 MGP_WSBEiJ_G0031487.1 mouse_genomes_project 7 65263625 65266763 - Fan1 protein_coding retained_intron MGP_WSBEiJ_T0080089.1 MGP_WSBEiJ_G0030716.1 mouse_genomes_project 7 1582477 1610394 - MGP_WSBEiJ_P0080089 Hspbp1 protein_coding protein_coding MGP_WSBEiJ_T0080090.1 MGP_WSBEiJ_G0030716.1 mouse_genomes_project 7 1584092 1586554 - MGP_WSBEiJ_P0080090 Hspbp1 protein_coding protein_coding MGP_WSBEiJ_T0080091.1 MGP_WSBEiJ_G0030716.1 mouse_genomes_project 7 1586124 1586719 - Hspbp1 protein_coding processed_transcript MGP_WSBEiJ_T0080092.1 MGP_WSBEiJ_G0030716.1 mouse_genomes_project 7 1586531 1610320 - MGP_WSBEiJ_P0080092 Hspbp1 protein_coding protein_coding MGP_WSBEiJ_T0080093.1 MGP_WSBEiJ_G0030716.1 mouse_genomes_project 7 1602325 1609987 - MGP_WSBEiJ_P0080093 Hspbp1 protein_coding protein_coding MGP_WSBEiJ_T0080094.1 MGP_WSBEiJ_G0030716.1 mouse_genomes_project 7 1602325 1610307 - MGP_WSBEiJ_P0080094 Hspbp1 protein_coding protein_coding MGP_WSBEiJ_T0084094.1 MGP_WSBEiJ_G0031752.1 mouse_genomes_project 7 105220340 105248906 + MGP_WSBEiJ_P0084094 Rrm1 protein_coding protein_coding MGP_WSBEiJ_T0083707.1 MGP_WSBEiJ_G0031672.1 mouse_genomes_project 7 100056652 100059743 + Rsf1 protein_coding retained_intron MGP_WSBEiJ_T0083708.1 MGP_WSBEiJ_G0031672.1 mouse_genomes_project 7 100056660 100164983 + Rsf1 protein_coding retained_intron MGP_WSBEiJ_T0083709.1 MGP_WSBEiJ_G0031672.1 mouse_genomes_project 7 100056660 100171320 + MGP_WSBEiJ_P0083709 Rsf1 protein_coding protein_coding MGP_WSBEiJ_T0083710.1 MGP_WSBEiJ_G0031672.1 mouse_genomes_project 7 100056670 100116064 + MGP_WSBEiJ_P0083710 Rsf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083711.1 MGP_WSBEiJ_G0031672.1 mouse_genomes_project 7 100133866 100137510 + Rsf1 protein_coding retained_intron MGP_WSBEiJ_T0083712.1 MGP_WSBEiJ_G0031672.1 mouse_genomes_project 7 100139147 100165171 + MGP_WSBEiJ_P0083712 Rsf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083713.1 MGP_WSBEiJ_G0031672.1 mouse_genomes_project 7 100147161 100154802 + Rsf1 protein_coding retained_intron MGP_WSBEiJ_T0083714.1 MGP_WSBEiJ_G0031672.1 mouse_genomes_project 7 100147516 100159349 + MGP_WSBEiJ_P0083714 Rsf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083689.1 MGP_WSBEiJ_G0031670.1 mouse_genomes_project 7 99950005 100015519 + MGP_WSBEiJ_P0083689 Ints4 protein_coding protein_coding MGP_WSBEiJ_T0083690.1 MGP_WSBEiJ_G0031670.1 mouse_genomes_project 7 99950052 99983717 + Ints4 protein_coding retained_intron MGP_WSBEiJ_T0083691.1 MGP_WSBEiJ_G0031670.1 mouse_genomes_project 7 99950062 99964979 + Ints4 protein_coding retained_intron MGP_WSBEiJ_T0083692.1 MGP_WSBEiJ_G0031670.1 mouse_genomes_project 7 99971877 99977351 + MGP_WSBEiJ_P0083692 Ints4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083693.1 MGP_WSBEiJ_G0031670.1 mouse_genomes_project 7 100003651 100008493 + Ints4 protein_coding retained_intron MGP_WSBEiJ_T0083694.1 MGP_WSBEiJ_G0031670.1 mouse_genomes_project 7 100008327 100015387 + Ints4 protein_coding retained_intron MGP_WSBEiJ_T0083695.1 MGP_WSBEiJ_G0031670.1 mouse_genomes_project 7 100008559 100015520 + Ints4 protein_coding retained_intron MGP_WSBEiJ_T0086551.1 MGP_WSBEiJ_G0032426.1 mouse_genomes_project 7 149973126 149977550 + MGP_WSBEiJ_P0086551 Fgf15 protein_coding protein_coding MGP_WSBEiJ_T0015356.1 MGP_WSBEiJ_G0013486.1 mouse_genomes_project 7 90776157 90777137 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0085514.1 MGP_WSBEiJ_G0032193.1 mouse_genomes_project 7 131908172 131926958 + MGP_WSBEiJ_P0085514 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0085515.1 MGP_WSBEiJ_G0032193.1 mouse_genomes_project 7 131922530 131925178 + MGP_WSBEiJ_P0085515 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081262.1 MGP_WSBEiJ_G0031085.1 mouse_genomes_project 7 26894007 26901333 - MGP_WSBEiJ_P0081262 protein_coding protein_coding MGP_WSBEiJ_T0081263.1 MGP_WSBEiJ_G0031085.1 mouse_genomes_project 7 26894007 26901385 - MGP_WSBEiJ_P0081263 protein_coding protein_coding MGP_WSBEiJ_T0081264.1 MGP_WSBEiJ_G0031085.1 mouse_genomes_project 7 26897250 26898373 - MGP_WSBEiJ_P0081264 protein_coding protein_coding MGP_WSBEiJ_T0008861.1 MGP_WSBEiJ_G0007144.1 mouse_genomes_project 7 128425601 128443340 - Gm15339 lincRNA lincRNA MGP_WSBEiJ_T0008799.1 MGP_WSBEiJ_G0007107.1 mouse_genomes_project 7 81081698 81087294 - Gm45169 lincRNA lincRNA MGP_WSBEiJ_T0085918.1 MGP_WSBEiJ_G0032278.1 mouse_genomes_project 7 142014993 142048375 + MGP_WSBEiJ_P0085918 Glrx3 protein_coding protein_coding MGP_WSBEiJ_T0081762.1 MGP_WSBEiJ_G0031199.1 mouse_genomes_project 7 29816274 29817949 - MGP_WSBEiJ_P0081762 protein_coding protein_coding MGP_WSBEiJ_T0101096.1 MGP_WSBEiJ_G0039553.1 mouse_genomes_project 7 91976076 91976289 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0008721.1 MGP_WSBEiJ_G0007050.1 mouse_genomes_project 7 43733167 43733525 + Gm44818 lincRNA lincRNA MGP_WSBEiJ_T0005111.1 MGP_WSBEiJ_G0004349.1 mouse_genomes_project 7 29835845 29844850 + antisense antisense MGP_WSBEiJ_T0080202.1 MGP_WSBEiJ_G0030757.1 mouse_genomes_project 7 3340497 3362404 + MGP_WSBEiJ_P0080202 Galp protein_coding protein_coding MGP_WSBEiJ_T0080203.1 MGP_WSBEiJ_G0030757.1 mouse_genomes_project 7 3347584 3357582 + Galp protein_coding processed_transcript MGP_WSBEiJ_T0081092.1 MGP_WSBEiJ_G0031036.1 mouse_genomes_project 7 25055262 25056019 - MGP_WSBEiJ_P0081092 protein_coding protein_coding MGP_WSBEiJ_T0015378.1 MGP_WSBEiJ_G0013508.1 mouse_genomes_project 7 105341645 105341858 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002272.1 MGP_WSBEiJ_G0002190.1 mouse_genomes_project 7 132725273 132725883 + TEC TEC MGP_WSBEiJ_T0086112.1 MGP_WSBEiJ_G0032343.1 mouse_genomes_project 7 145821210 145822401 - MGP_WSBEiJ_P0086112 Ifitm3 protein_coding protein_coding MGP_WSBEiJ_T0081268.1 MGP_WSBEiJ_G0031087.1 mouse_genomes_project 7 26916626 26923181 - MGP_WSBEiJ_P0081268 Timm50 protein_coding protein_coding MGP_WSBEiJ_T0081269.1 MGP_WSBEiJ_G0031087.1 mouse_genomes_project 7 26916932 26917773 - Timm50 protein_coding retained_intron MGP_WSBEiJ_T0081270.1 MGP_WSBEiJ_G0031087.1 mouse_genomes_project 7 26917536 26919127 - Timm50 protein_coding retained_intron MGP_WSBEiJ_T0081271.1 MGP_WSBEiJ_G0031087.1 mouse_genomes_project 7 26920614 26923146 - Timm50 protein_coding retained_intron MGP_WSBEiJ_T0081272.1 MGP_WSBEiJ_G0031087.1 mouse_genomes_project 7 26921325 26923165 - Timm50 protein_coding retained_intron MGP_WSBEiJ_T0081273.1 MGP_WSBEiJ_G0031087.1 mouse_genomes_project 7 26922022 26923048 - Timm50 protein_coding processed_transcript MGP_WSBEiJ_T0017784.1 MGP_WSBEiJ_G0015097.1 mouse_genomes_project 7 74766937 74786607 - 1810026B05Rik processed_transcript lincRNA MGP_WSBEiJ_T0017785.1 MGP_WSBEiJ_G0015097.1 mouse_genomes_project 7 74771763 74786456 - 1810026B05Rik processed_transcript lincRNA MGP_WSBEiJ_T0017786.1 MGP_WSBEiJ_G0015097.1 mouse_genomes_project 7 74771764 74786359 - 1810026B05Rik processed_transcript lincRNA MGP_WSBEiJ_T0017787.1 MGP_WSBEiJ_G0015097.1 mouse_genomes_project 7 74771769 74774586 - 1810026B05Rik processed_transcript retained_intron MGP_WSBEiJ_T0017788.1 MGP_WSBEiJ_G0015097.1 mouse_genomes_project 7 74771970 74784132 - 1810026B05Rik processed_transcript lincRNA MGP_WSBEiJ_T0017789.1 MGP_WSBEiJ_G0015097.1 mouse_genomes_project 7 74771991 74786185 - 1810026B05Rik processed_transcript lincRNA MGP_WSBEiJ_T0017790.1 MGP_WSBEiJ_G0015097.1 mouse_genomes_project 7 74772033 74786460 - 1810026B05Rik processed_transcript lincRNA MGP_WSBEiJ_T0017791.1 MGP_WSBEiJ_G0015097.1 mouse_genomes_project 7 74783364 74786598 - 1810026B05Rik processed_transcript retained_intron MGP_WSBEiJ_T0084098.1 MGP_WSBEiJ_G0031756.1 mouse_genomes_project 7 105319853 105320798 + MGP_WSBEiJ_P0084098 Olfr547 protein_coding protein_coding MGP_WSBEiJ_T0080622.1 MGP_WSBEiJ_G0030906.1 mouse_genomes_project 7 17032947 17054379 + MGP_WSBEiJ_P0080622 Fbxo46 protein_coding protein_coding MGP_WSBEiJ_T0080623.1 MGP_WSBEiJ_G0030906.1 mouse_genomes_project 7 17045899 17052019 + MGP_WSBEiJ_P0080623 Fbxo46 protein_coding protein_coding MGP_WSBEiJ_T0100958.1 MGP_WSBEiJ_G0039415.1 mouse_genomes_project 7 7502275 7503182 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0083805.1 MGP_WSBEiJ_G0031695.1 mouse_genomes_project 7 102036920 102042750 - MGP_WSBEiJ_P0083805 Rps3 protein_coding protein_coding MGP_WSBEiJ_T0083806.1 MGP_WSBEiJ_G0031695.1 mouse_genomes_project 7 102036928 102042670 - MGP_WSBEiJ_P0083806 Rps3 protein_coding protein_coding MGP_WSBEiJ_T0083807.1 MGP_WSBEiJ_G0031695.1 mouse_genomes_project 7 102037911 102042669 - Rps3 protein_coding retained_intron MGP_WSBEiJ_T0083808.1 MGP_WSBEiJ_G0031695.1 mouse_genomes_project 7 102038728 102042653 - Rps3 protein_coding retained_intron MGP_WSBEiJ_T0084414.1 MGP_WSBEiJ_G0031947.1 mouse_genomes_project 7 111193917 111194862 - MGP_WSBEiJ_P0084414 Olfr478 protein_coding protein_coding MGP_WSBEiJ_T0086107.1 MGP_WSBEiJ_G0032340.1 mouse_genomes_project 7 145729204 145730481 - MGP_WSBEiJ_P0086107 Ifitm5 protein_coding protein_coding MGP_WSBEiJ_T0080550.1 MGP_WSBEiJ_G0030883.1 mouse_genomes_project 7 15771461 15779229 + MGP_WSBEiJ_P0080550 Ceacam13 protein_coding protein_coding MGP_WSBEiJ_T0080551.1 MGP_WSBEiJ_G0030883.1 mouse_genomes_project 7 15771461 15775061 + MGP_WSBEiJ_P0080551 Ceacam13 protein_coding protein_coding MGP_WSBEiJ_T0085868.1 MGP_WSBEiJ_G0032262.1 mouse_genomes_project 7 138120122 138132745 + MGP_WSBEiJ_P0085868 Bccip protein_coding protein_coding MGP_WSBEiJ_T0085869.1 MGP_WSBEiJ_G0032262.1 mouse_genomes_project 7 138120137 138127058 + Bccip protein_coding retained_intron MGP_WSBEiJ_T0085870.1 MGP_WSBEiJ_G0032262.1 mouse_genomes_project 7 138120191 138125937 + Bccip protein_coding processed_transcript MGP_WSBEiJ_T0085871.1 MGP_WSBEiJ_G0032262.1 mouse_genomes_project 7 138126348 138132541 + Bccip protein_coding processed_transcript MGP_WSBEiJ_T0085872.1 MGP_WSBEiJ_G0032262.1 mouse_genomes_project 7 138128980 138130817 + Bccip protein_coding retained_intron MGP_WSBEiJ_T0082570.1 MGP_WSBEiJ_G0031399.1 mouse_genomes_project 7 46154295 46174745 + MGP_WSBEiJ_P0082570 Lmtk3 protein_coding protein_coding MGP_WSBEiJ_T0082571.1 MGP_WSBEiJ_G0031399.1 mouse_genomes_project 7 46154358 46161529 + MGP_WSBEiJ_P0082571 Lmtk3 protein_coding protein_coding MGP_WSBEiJ_T0082572.1 MGP_WSBEiJ_G0031399.1 mouse_genomes_project 7 46154504 46174710 + MGP_WSBEiJ_P0082572 Lmtk3 protein_coding protein_coding MGP_WSBEiJ_T0082573.1 MGP_WSBEiJ_G0031399.1 mouse_genomes_project 7 46155941 46174745 + MGP_WSBEiJ_P0082573 Lmtk3 protein_coding protein_coding MGP_WSBEiJ_T0082574.1 MGP_WSBEiJ_G0031399.1 mouse_genomes_project 7 46155948 46158510 + MGP_WSBEiJ_P0082574 Lmtk3 protein_coding protein_coding MGP_WSBEiJ_T0082575.1 MGP_WSBEiJ_G0031399.1 mouse_genomes_project 7 46156071 46158320 + Lmtk3 protein_coding retained_intron MGP_WSBEiJ_T0082576.1 MGP_WSBEiJ_G0031399.1 mouse_genomes_project 7 46157118 46163163 + MGP_WSBEiJ_P0082576 Lmtk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0082577.1 MGP_WSBEiJ_G0031399.1 mouse_genomes_project 7 46158465 46163202 + MGP_WSBEiJ_P0082577 Lmtk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086058.1 MGP_WSBEiJ_G0032329.1 mouse_genomes_project 7 145576622 145593596 - MGP_WSBEiJ_P0086058 Zfp941 protein_coding protein_coding MGP_WSBEiJ_T0086059.1 MGP_WSBEiJ_G0032329.1 mouse_genomes_project 7 145578728 145593550 - MGP_WSBEiJ_P0086059 Zfp941 protein_coding protein_coding MGP_WSBEiJ_T0086060.1 MGP_WSBEiJ_G0032329.1 mouse_genomes_project 7 145588303 145593564 - Zfp941 protein_coding processed_transcript MGP_WSBEiJ_T0002235.1 MGP_WSBEiJ_G0002153.1 mouse_genomes_project 7 81335207 81336440 - TEC TEC MGP_WSBEiJ_T0082436.1 MGP_WSBEiJ_G0031366.1 mouse_genomes_project 7 45660374 45664049 + MGP_WSBEiJ_P0082436 Hrc protein_coding protein_coding MGP_WSBEiJ_T0080225.1 MGP_WSBEiJ_G0030764.1 mouse_genomes_project 7 3573192 3608835 + MGP_WSBEiJ_P0080225 Gm20715 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099708.1 MGP_WSBEiJ_G0038371.1 mouse_genomes_project 7 44473270 44473363 + Gm23991 snoRNA snoRNA MGP_WSBEiJ_T0008694.1 MGP_WSBEiJ_G0007032.1 mouse_genomes_project 7 35249845 35251157 + Gm28514 lincRNA lincRNA MGP_WSBEiJ_T0083820.1 MGP_WSBEiJ_G0031697.1 mouse_genomes_project 7 102204757 102207779 - MGP_WSBEiJ_P0083820 Tpbgl protein_coding protein_coding MGP_WSBEiJ_T0080561.1 MGP_WSBEiJ_G0030891.1 mouse_genomes_project 7 16717119 16738238 + MGP_WSBEiJ_P0080561 Mill2 protein_coding protein_coding MGP_WSBEiJ_T0080562.1 MGP_WSBEiJ_G0030891.1 mouse_genomes_project 7 16717142 16742867 + MGP_WSBEiJ_P0080562 Mill2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080563.1 MGP_WSBEiJ_G0030891.1 mouse_genomes_project 7 16717145 16745168 + MGP_WSBEiJ_P0080563 Mill2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0080564.1 MGP_WSBEiJ_G0030891.1 mouse_genomes_project 7 16717154 16735963 + Mill2 protein_coding processed_transcript MGP_WSBEiJ_T0086003.1 MGP_WSBEiJ_G0032300.1 mouse_genomes_project 7 144778313 144783406 + MGP_WSBEiJ_P0086003 Prap1 protein_coding protein_coding MGP_WSBEiJ_T0097097.1 MGP_WSBEiJ_G0035778.1 mouse_genomes_project 7 71892750 71892835 + Gm24880 rRNA rRNA MGP_WSBEiJ_T0008856.1 MGP_WSBEiJ_G0007140.1 mouse_genomes_project 7 120818494 120871362 + Gm45152 lincRNA lincRNA MGP_WSBEiJ_T0085038.1 MGP_WSBEiJ_G0032110.1 mouse_genomes_project 7 129689008 129699018 + D430042O09Rik protein_coding retained_intron MGP_WSBEiJ_T0085039.1 MGP_WSBEiJ_G0032110.1 mouse_genomes_project 7 129689033 129860860 + MGP_WSBEiJ_P0085039 D430042O09Rik protein_coding protein_coding MGP_WSBEiJ_T0085040.1 MGP_WSBEiJ_G0032110.1 mouse_genomes_project 7 129689082 129747296 + MGP_WSBEiJ_P0085040 D430042O09Rik protein_coding protein_coding MGP_WSBEiJ_T0085041.1 MGP_WSBEiJ_G0032110.1 mouse_genomes_project 7 129773050 129848395 + D430042O09Rik protein_coding processed_transcript MGP_WSBEiJ_T0085042.1 MGP_WSBEiJ_G0032110.1 mouse_genomes_project 7 129819105 129862153 + D430042O09Rik protein_coding retained_intron MGP_WSBEiJ_T0085043.1 MGP_WSBEiJ_G0032110.1 mouse_genomes_project 7 129847076 129859607 + MGP_WSBEiJ_P0085043 D430042O09Rik protein_coding protein_coding MGP_WSBEiJ_T0085044.1 MGP_WSBEiJ_G0032110.1 mouse_genomes_project 7 129851666 129855347 + D430042O09Rik protein_coding retained_intron MGP_WSBEiJ_T0002253.1 MGP_WSBEiJ_G0002171.1 mouse_genomes_project 7 126215858 126217632 + TEC TEC MGP_WSBEiJ_T0083139.1 MGP_WSBEiJ_G0031529.1 mouse_genomes_project 7 80228955 80238835 + MGP_WSBEiJ_P0083139 Mrps11 protein_coding protein_coding MGP_WSBEiJ_T0083140.1 MGP_WSBEiJ_G0031529.1 mouse_genomes_project 7 80229149 80237072 + Mrps11 protein_coding retained_intron MGP_WSBEiJ_T0083141.1 MGP_WSBEiJ_G0031529.1 mouse_genomes_project 7 80229191 80235249 + Mrps11 protein_coding retained_intron MGP_WSBEiJ_T0083142.1 MGP_WSBEiJ_G0031529.1 mouse_genomes_project 7 80229192 80238835 + MGP_WSBEiJ_P0083142 Mrps11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0083143.1 MGP_WSBEiJ_G0031529.1 mouse_genomes_project 7 80229206 80236759 + Mrps11 protein_coding retained_intron MGP_WSBEiJ_T0083144.1 MGP_WSBEiJ_G0031529.1 mouse_genomes_project 7 80229207 80235141 + Mrps11 protein_coding retained_intron MGP_WSBEiJ_T0002194.1 MGP_WSBEiJ_G0002113.1 mouse_genomes_project 7 56902050 56906070 - TEC TEC MGP_WSBEiJ_T0080689.1 MGP_WSBEiJ_G0030923.1 mouse_genomes_project 7 17359213 17363235 - MGP_WSBEiJ_P0080689 protein_coding protein_coding MGP_WSBEiJ_T0081196.1 MGP_WSBEiJ_G0031065.1 mouse_genomes_project 7 26064754 26088702 - MGP_WSBEiJ_P0081196 Pld3 protein_coding protein_coding MGP_WSBEiJ_T0081197.1 MGP_WSBEiJ_G0031065.1 mouse_genomes_project 7 26064754 26088696 - MGP_WSBEiJ_P0081197 Pld3 protein_coding protein_coding MGP_WSBEiJ_T0081198.1 MGP_WSBEiJ_G0031065.1 mouse_genomes_project 7 26064949 26065501 - Pld3 protein_coding retained_intron MGP_WSBEiJ_T0081199.1 MGP_WSBEiJ_G0031065.1 mouse_genomes_project 7 26066208 26072145 - Pld3 protein_coding retained_intron MGP_WSBEiJ_T0081200.1 MGP_WSBEiJ_G0031065.1 mouse_genomes_project 7 26075331 26088500 - MGP_WSBEiJ_P0081200 Pld3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081201.1 MGP_WSBEiJ_G0031065.1 mouse_genomes_project 7 26076874 26088668 - MGP_WSBEiJ_P0081201 Pld3 protein_coding protein_coding MGP_WSBEiJ_T0081202.1 MGP_WSBEiJ_G0031065.1 mouse_genomes_project 7 26077409 26078414 - MGP_WSBEiJ_P0081202 Pld3 protein_coding protein_coding MGP_WSBEiJ_T0081203.1 MGP_WSBEiJ_G0031065.1 mouse_genomes_project 7 26078484 26088635 - Pld3 protein_coding processed_transcript MGP_WSBEiJ_T0005165.1 MGP_WSBEiJ_G0004388.1 mouse_genomes_project 7 84481777 84494053 - 4933406J10Rik antisense antisense MGP_WSBEiJ_T0081046.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24056439 24064414 - MGP_WSBEiJ_P0081046 Ccdc97 protein_coding protein_coding MGP_WSBEiJ_T0081047.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24058268 24061440 - Ccdc97 protein_coding processed_transcript MGP_WSBEiJ_T0081048.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24059467 24064329 - Ccdc97 protein_coding retained_intron MGP_WSBEiJ_T0081049.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24060155 24064371 - MGP_WSBEiJ_P0081049 Ccdc97 protein_coding protein_coding MGP_WSBEiJ_T0081050.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24060243 24061728 - Ccdc97 protein_coding retained_intron MGP_WSBEiJ_T0081051.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24061237 24064332 - Ccdc97 protein_coding processed_transcript MGP_WSBEiJ_T0081052.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24061237 24064317 - Ccdc97 protein_coding processed_transcript MGP_WSBEiJ_T0081053.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24061474 24064381 - Ccdc97 protein_coding processed_transcript MGP_WSBEiJ_T0081054.1 MGP_WSBEiJ_G0031025.1 mouse_genomes_project 7 24062239 24064393 - Ccdc97 protein_coding processed_transcript MGP_WSBEiJ_T0085397.1 MGP_WSBEiJ_G0032169.1 mouse_genomes_project 7 131345550 131347727 - MGP_WSBEiJ_P0085397 protein_coding protein_coding MGP_WSBEiJ_T0084703.1 MGP_WSBEiJ_G0032030.1 mouse_genomes_project 7 119897077 119999863 - MGP_WSBEiJ_P0084703 Pik3c2a protein_coding protein_coding MGP_WSBEiJ_T0084704.1 MGP_WSBEiJ_G0032030.1 mouse_genomes_project 7 119897088 119900471 - Pik3c2a protein_coding retained_intron MGP_WSBEiJ_T0084705.1 MGP_WSBEiJ_G0032030.1 mouse_genomes_project 7 119899446 119929424 - MGP_WSBEiJ_P0084705 Pik3c2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084706.1 MGP_WSBEiJ_G0032030.1 mouse_genomes_project 7 119899568 119999863 - MGP_WSBEiJ_P0084706 Pik3c2a protein_coding protein_coding MGP_WSBEiJ_T0084707.1 MGP_WSBEiJ_G0032030.1 mouse_genomes_project 7 119901922 119902663 - Pik3c2a protein_coding retained_intron MGP_WSBEiJ_T0084708.1 MGP_WSBEiJ_G0032030.1 mouse_genomes_project 7 119951771 119999861 - MGP_WSBEiJ_P0084708 Pik3c2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0084709.1 MGP_WSBEiJ_G0032030.1 mouse_genomes_project 7 119952758 119999853 - Pik3c2a protein_coding retained_intron MGP_WSBEiJ_T0080356.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10584060 10620915 + Lig1 protein_coding processed_transcript MGP_WSBEiJ_T0080357.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10584090 10620915 + MGP_WSBEiJ_P0080357 Lig1 protein_coding protein_coding MGP_WSBEiJ_T0080358.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10585602 10620915 + MGP_WSBEiJ_P0080358 Lig1 protein_coding protein_coding MGP_WSBEiJ_T0080359.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10585611 10600028 + MGP_WSBEiJ_P0080359 Lig1 protein_coding protein_coding MGP_WSBEiJ_T0080360.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10585631 10601007 + MGP_WSBEiJ_P0080360 Lig1 protein_coding protein_coding MGP_WSBEiJ_T0080361.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10585641 10620916 + Lig1 protein_coding processed_transcript MGP_WSBEiJ_T0080362.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10586041 10620923 + Lig1 protein_coding processed_transcript MGP_WSBEiJ_T0080363.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10586041 10620915 + MGP_WSBEiJ_P0080363 Lig1 protein_coding protein_coding MGP_WSBEiJ_T0080364.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10588599 10620923 + Lig1 protein_coding processed_transcript MGP_WSBEiJ_T0080365.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10588599 10599755 + MGP_WSBEiJ_P0080365 Lig1 protein_coding protein_coding MGP_WSBEiJ_T0080366.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10611292 10614506 + Lig1 protein_coding retained_intron MGP_WSBEiJ_T0080367.1 MGP_WSBEiJ_G0030824.1 mouse_genomes_project 7 10615680 10620855 + Lig1 protein_coding retained_intron MGP_WSBEiJ_T0097224.1 MGP_WSBEiJ_G0035905.1 mouse_genomes_project 7 83197041 83197168 + Mir1839 scaRNA scaRNA MGP_WSBEiJ_T0081899.1 MGP_WSBEiJ_G0031226.1 mouse_genomes_project 7 33631770 33681273 - MGP_WSBEiJ_P0081899 Lsm14a protein_coding protein_coding MGP_WSBEiJ_T0081900.1 MGP_WSBEiJ_G0031226.1 mouse_genomes_project 7 33631787 33640620 - MGP_WSBEiJ_P0081900 Lsm14a protein_coding protein_coding MGP_WSBEiJ_T0081901.1 MGP_WSBEiJ_G0031226.1 mouse_genomes_project 7 33632839 33684901 - MGP_WSBEiJ_P0081901 Lsm14a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081902.1 MGP_WSBEiJ_G0031226.1 mouse_genomes_project 7 33633062 33659444 - MGP_WSBEiJ_P0081902 Lsm14a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081903.1 MGP_WSBEiJ_G0031226.1 mouse_genomes_project 7 33637920 33640681 - Lsm14a protein_coding retained_intron MGP_WSBEiJ_T0081904.1 MGP_WSBEiJ_G0031226.1 mouse_genomes_project 7 33640607 33681058 - MGP_WSBEiJ_P0081904 Lsm14a protein_coding protein_coding MGP_WSBEiJ_T0081905.1 MGP_WSBEiJ_G0031226.1 mouse_genomes_project 7 33640938 33680659 - MGP_WSBEiJ_P0081905 Lsm14a protein_coding protein_coding MGP_WSBEiJ_T0081906.1 MGP_WSBEiJ_G0031226.1 mouse_genomes_project 7 33678160 33680740 - Lsm14a protein_coding retained_intron MGP_WSBEiJ_T0005158.1 MGP_WSBEiJ_G0004383.1 mouse_genomes_project 7 81596014 81609762 - Gm21057 antisense antisense MGP_WSBEiJ_T0005159.1 MGP_WSBEiJ_G0004383.1 mouse_genomes_project 7 81608281 81609782 - Gm21057 antisense antisense MGP_WSBEiJ_T0084186.1 MGP_WSBEiJ_G0031840.1 mouse_genomes_project 7 106957092 106958040 - MGP_WSBEiJ_P0084186 Olfr645 protein_coding protein_coding MGP_WSBEiJ_T0080230.1 MGP_WSBEiJ_G0030768.1 mouse_genomes_project 7 3642080 3643605 + MGP_WSBEiJ_P0080230 Olfr1346 protein_coding protein_coding MGP_WSBEiJ_T0081633.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29397976 29400030 + U2af1l4 protein_coding processed_transcript MGP_WSBEiJ_T0081634.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29397982 29399801 + U2af1l4 protein_coding processed_transcript MGP_WSBEiJ_T0081635.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29397994 29399157 + MGP_WSBEiJ_P0081635 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081636.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29397996 29400041 + MGP_WSBEiJ_P0081636 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081637.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398000 29400038 + MGP_WSBEiJ_P0081637 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081638.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398001 29399283 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081639.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398001 29400027 + MGP_WSBEiJ_P0081639 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081640.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398004 29399287 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081641.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398005 29399284 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081642.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398011 29399836 + MGP_WSBEiJ_P0081642 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081643.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398013 29399474 + MGP_WSBEiJ_P0081643 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081644.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398014 29399840 + MGP_WSBEiJ_P0081644 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081645.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398015 29398735 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081646.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398017 29399920 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081647.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398019 29402619 + MGP_WSBEiJ_P0081647 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081648.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398019 29399414 + MGP_WSBEiJ_P0081648 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081649.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398021 29399177 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081650.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398023 29400040 + MGP_WSBEiJ_P0081650 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081651.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398024 29398734 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081652.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398025 29400037 + U2af1l4 protein_coding processed_transcript MGP_WSBEiJ_T0081653.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398025 29402621 + MGP_WSBEiJ_P0081653 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081654.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398030 29402616 + MGP_WSBEiJ_P0081654 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081655.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398031 29399855 + MGP_WSBEiJ_P0081655 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081656.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398031 29399855 + MGP_WSBEiJ_P0081656 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081657.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398031 29399855 + MGP_WSBEiJ_P0081657 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081658.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398031 29399855 + MGP_WSBEiJ_P0081658 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081659.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398033 29400035 + U2af1l4 protein_coding processed_transcript MGP_WSBEiJ_T0081660.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398033 29399224 + MGP_WSBEiJ_P0081660 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081661.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398034 29402060 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081662.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398035 29399152 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081663.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398042 29399848 + U2af1l4 protein_coding processed_transcript MGP_WSBEiJ_T0081664.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398053 29400040 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081665.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398068 29399031 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081666.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398070 29399855 + MGP_WSBEiJ_P0081666 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081667.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398072 29399855 + MGP_WSBEiJ_P0081667 U2af1l4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081668.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398501 29399283 + U2af1l4 protein_coding retained_intron MGP_WSBEiJ_T0081669.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398546 29398954 + U2af1l4 protein_coding processed_transcript MGP_WSBEiJ_T0081670.1 MGP_WSBEiJ_G0031176.1 mouse_genomes_project 7 29398554 29399855 + MGP_WSBEiJ_P0081670 U2af1l4 protein_coding protein_coding MGP_WSBEiJ_T0081893.1 MGP_WSBEiJ_G0031225.1 mouse_genomes_project 7 33530337 33530793 + MGP_WSBEiJ_P0081893 Gm6096 protein_coding protein_coding MGP_WSBEiJ_T0081100.1 MGP_WSBEiJ_G0031040.1 mouse_genomes_project 7 25291586 25319792 + MGP_WSBEiJ_P0081100 Cyp2a5 protein_coding protein_coding MGP_WSBEiJ_T0081102.1 MGP_WSBEiJ_G0031040.1 mouse_genomes_project 7 25291645 25317275 + MGP_WSBEiJ_P0081102 Cyp2a5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081103.1 MGP_WSBEiJ_G0031040.1 mouse_genomes_project 7 25292485 25317214 + Cyp2a5 protein_coding processed_transcript MGP_WSBEiJ_T0080248.1 MGP_WSBEiJ_G0030778.1 mouse_genomes_project 7 4470122 4488289 - MGP_WSBEiJ_P0080248 Clcn4 protein_coding protein_coding MGP_WSBEiJ_T0080549.1 MGP_WSBEiJ_G0030882.1 mouse_genomes_project 7 15733591 15740024 + MGP_WSBEiJ_P0080549 Ceacam11 protein_coding protein_coding MGP_WSBEiJ_T0015365.1 MGP_WSBEiJ_G0013495.1 mouse_genomes_project 7 98891896 98892368 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0084240.1 MGP_WSBEiJ_G0031866.1 mouse_genomes_project 7 107519592 107520556 + MGP_WSBEiJ_P0084240 Olfr661 protein_coding protein_coding MGP_WSBEiJ_T0002152.1 MGP_WSBEiJ_G0002071.1 mouse_genomes_project 7 14556840 14558502 - TEC TEC MGP_WSBEiJ_T0080192.1 MGP_WSBEiJ_G0030755.1 mouse_genomes_project 7 3257249 3258974 - MGP_WSBEiJ_P0080192 Zfp787 protein_coding protein_coding MGP_WSBEiJ_T0083393.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82529658 82579643 - Sec11a protein_coding processed_transcript MGP_WSBEiJ_T0083394.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82532485 82579611 - MGP_WSBEiJ_P0083394 Sec11a protein_coding protein_coding MGP_WSBEiJ_T0083395.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82542790 82554423 - Sec11a protein_coding processed_transcript MGP_WSBEiJ_T0083396.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82542790 82552333 - Sec11a protein_coding retained_intron MGP_WSBEiJ_T0083397.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82542790 82579878 - MGP_WSBEiJ_P0083397 Sec11a protein_coding protein_coding MGP_WSBEiJ_T0083398.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82542979 82543744 - Sec11a protein_coding retained_intron MGP_WSBEiJ_T0083399.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82543074 82579878 - MGP_WSBEiJ_P0083399 Sec11a protein_coding protein_coding MGP_WSBEiJ_T0083400.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82543176 82579609 - Sec11a protein_coding processed_transcript MGP_WSBEiJ_T0083401.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82543502 82579878 - MGP_WSBEiJ_P0083401 Sec11a protein_coding protein_coding MGP_WSBEiJ_T0083402.1 MGP_WSBEiJ_G0031572.1 mouse_genomes_project 7 82548293 82579840 - Sec11a protein_coding retained_intron MGP_WSBEiJ_T0101041.1 MGP_WSBEiJ_G0039498.1 mouse_genomes_project 7 44202718 44205137 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015239.1 MGP_WSBEiJ_G0013369.1 mouse_genomes_project 7 15558001 15558493 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0082264.1 MGP_WSBEiJ_G0031319.1 mouse_genomes_project 7 44765724 44771819 - MGP_WSBEiJ_P0082264 Spib protein_coding protein_coding MGP_WSBEiJ_T0082265.1 MGP_WSBEiJ_G0031319.1 mouse_genomes_project 7 44767712 44771024 - MGP_WSBEiJ_P0082265 Spib protein_coding protein_coding MGP_WSBEiJ_T0082266.1 MGP_WSBEiJ_G0031319.1 mouse_genomes_project 7 44767712 44771801 - MGP_WSBEiJ_P0082266 Spib protein_coding protein_coding MGP_WSBEiJ_T0015330.1 MGP_WSBEiJ_G0013460.1 mouse_genomes_project 7 70683155 70684154 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0080966.1 MGP_WSBEiJ_G0031005.1 mouse_genomes_project 7 23488603 23501166 - MGP_WSBEiJ_P0080966 Gsk3a protein_coding protein_coding MGP_WSBEiJ_T0080967.1 MGP_WSBEiJ_G0031005.1 mouse_genomes_project 7 23488603 23501166 - MGP_WSBEiJ_P0080967 Gsk3a protein_coding protein_coding MGP_WSBEiJ_T0080968.1 MGP_WSBEiJ_G0031005.1 mouse_genomes_project 7 23492787 23494567 - Gsk3a protein_coding retained_intron MGP_WSBEiJ_T0008755.1 MGP_WSBEiJ_G0007075.1 mouse_genomes_project 7 71490035 71511084 - Gm28258 lincRNA lincRNA MGP_WSBEiJ_T0080527.1 MGP_WSBEiJ_G0030874.1 mouse_genomes_project 7 14632449 14637413 + MGP_WSBEiJ_P0080527 Pnmal1 protein_coding protein_coding MGP_WSBEiJ_T0083742.1 MGP_WSBEiJ_G0031678.1 mouse_genomes_project 7 100603960 100672104 - MGP_WSBEiJ_P0083742 Capn5 protein_coding protein_coding MGP_WSBEiJ_T0083743.1 MGP_WSBEiJ_G0031678.1 mouse_genomes_project 7 100606062 100651038 - MGP_WSBEiJ_P0083743 Capn5 protein_coding protein_coding MGP_WSBEiJ_T0083745.1 MGP_WSBEiJ_G0031678.1 mouse_genomes_project 7 100632835 100650906 - Capn5 protein_coding processed_transcript MGP_WSBEiJ_T0083746.1 MGP_WSBEiJ_G0031678.1 mouse_genomes_project 7 100650676 100655001 - MGP_WSBEiJ_P0083746 Capn5 protein_coding protein_coding MGP_WSBEiJ_T0083747.1 MGP_WSBEiJ_G0031678.1 mouse_genomes_project 7 100650693 100655480 - MGP_WSBEiJ_P0083747 Capn5 protein_coding protein_coding MGP_WSBEiJ_T0005097.1 MGP_WSBEiJ_G0004337.1 mouse_genomes_project 7 25756308 25764987 - Gm15567 antisense antisense MGP_WSBEiJ_T0084248.1 MGP_WSBEiJ_G0031874.1 mouse_genomes_project 7 107830163 107831102 - MGP_WSBEiJ_P0084248 Olfr670 protein_coding protein_coding MGP_WSBEiJ_T0096845.1 MGP_WSBEiJ_G0035526.1 mouse_genomes_project 7 111323570 111324514 - pseudogene pseudogene MGP_WSBEiJ_T0099726.1 MGP_WSBEiJ_G0038389.1 mouse_genomes_project 7 68537921 68538058 - Gm23233 snoRNA snoRNA MGP_WSBEiJ_T0002205.1 MGP_WSBEiJ_G0002124.1 mouse_genomes_project 7 73819256 73819761 + TEC TEC MGP_WSBEiJ_T0086341.1 MGP_WSBEiJ_G0032388.1 mouse_genomes_project 7 147316726 147328253 - MGP_WSBEiJ_P0086341 protein_coding protein_coding MGP_WSBEiJ_T0086342.1 MGP_WSBEiJ_G0032388.1 mouse_genomes_project 7 147321495 147333618 - MGP_WSBEiJ_P0086342 protein_coding protein_coding MGP_WSBEiJ_T0086343.1 MGP_WSBEiJ_G0032388.1 mouse_genomes_project 7 147321514 147333399 - MGP_WSBEiJ_P0086343 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086344.1 MGP_WSBEiJ_G0032388.1 mouse_genomes_project 7 147328779 147333399 - protein_coding retained_intron MGP_WSBEiJ_T0015231.1 MGP_WSBEiJ_G0013361.1 mouse_genomes_project 7 11637380 11639540 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086460.1 MGP_WSBEiJ_G0032404.1 mouse_genomes_project 7 148102678 148148896 + MGP_WSBEiJ_P0086460 Kcnq1 protein_coding protein_coding MGP_WSBEiJ_T0086461.1 MGP_WSBEiJ_G0032404.1 mouse_genomes_project 7 148102831 148148896 + MGP_WSBEiJ_P0086461 Kcnq1 protein_coding protein_coding MGP_WSBEiJ_T0086462.1 MGP_WSBEiJ_G0032404.1 mouse_genomes_project 7 148103061 148148896 + MGP_WSBEiJ_P0086462 Kcnq1 protein_coding protein_coding MGP_WSBEiJ_T0086463.1 MGP_WSBEiJ_G0032404.1 mouse_genomes_project 7 148103570 148431130 + MGP_WSBEiJ_P0086463 Kcnq1 protein_coding protein_coding MGP_WSBEiJ_T0086464.1 MGP_WSBEiJ_G0032404.1 mouse_genomes_project 7 148103867 148430213 + MGP_WSBEiJ_P0086464 Kcnq1 protein_coding protein_coding MGP_WSBEiJ_T0086465.1 MGP_WSBEiJ_G0032404.1 mouse_genomes_project 7 148104667 148148896 + MGP_WSBEiJ_P0086465 Kcnq1 protein_coding protein_coding MGP_WSBEiJ_T0086466.1 MGP_WSBEiJ_G0032404.1 mouse_genomes_project 7 148105510 148148896 + MGP_WSBEiJ_P0086466 Kcnq1 protein_coding protein_coding MGP_WSBEiJ_T0101040.1 MGP_WSBEiJ_G0039497.1 mouse_genomes_project 7 44202718 44205146 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0080752.1 MGP_WSBEiJ_G0030942.1 mouse_genomes_project 7 17749224 17760597 - Cblc protein_coding processed_transcript MGP_WSBEiJ_T0080753.1 MGP_WSBEiJ_G0030942.1 mouse_genomes_project 7 17749965 17755778 - Cblc protein_coding processed_transcript MGP_WSBEiJ_T0080754.1 MGP_WSBEiJ_G0030942.1 mouse_genomes_project 7 17750058 17769976 - MGP_WSBEiJ_P0080754 Cblc protein_coding protein_coding MGP_WSBEiJ_T0080755.1 MGP_WSBEiJ_G0030942.1 mouse_genomes_project 7 17750058 17769992 - MGP_WSBEiJ_P0080755 Cblc protein_coding protein_coding MGP_WSBEiJ_T0080756.1 MGP_WSBEiJ_G0030942.1 mouse_genomes_project 7 17756517 17764458 - Cblc protein_coding processed_transcript MGP_WSBEiJ_T0080757.1 MGP_WSBEiJ_G0030942.1 mouse_genomes_project 7 17761913 17765885 - Cblc protein_coding processed_transcript MGP_WSBEiJ_T0080758.1 MGP_WSBEiJ_G0030942.1 mouse_genomes_project 7 17764068 17769988 - Cblc protein_coding retained_intron MGP_WSBEiJ_T0082033.1 MGP_WSBEiJ_G0031249.1 mouse_genomes_project 7 37625127 37635242 - MGP_WSBEiJ_P0082033 Ccne1 protein_coding protein_coding MGP_WSBEiJ_T0082034.1 MGP_WSBEiJ_G0031249.1 mouse_genomes_project 7 37625811 37626647 - Ccne1 protein_coding retained_intron MGP_WSBEiJ_T0082035.1 MGP_WSBEiJ_G0031249.1 mouse_genomes_project 7 37625957 37626515 - Ccne1 protein_coding processed_transcript MGP_WSBEiJ_T0082036.1 MGP_WSBEiJ_G0031249.1 mouse_genomes_project 7 37627796 37634607 - MGP_WSBEiJ_P0082036 Ccne1 protein_coding protein_coding MGP_WSBEiJ_T0082037.1 MGP_WSBEiJ_G0031249.1 mouse_genomes_project 7 37630309 37635210 - MGP_WSBEiJ_P0082037 Ccne1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0081261.1 MGP_WSBEiJ_G0031084.1 mouse_genomes_project 7 26883068 26885492 + MGP_WSBEiJ_P0081261 Eid2b protein_coding protein_coding MGP_WSBEiJ_T0080346.1 MGP_WSBEiJ_G0030820.1 mouse_genomes_project 7 10433651 10434539 - MGP_WSBEiJ_P0080346 Vmn1r87 protein_coding protein_coding MGP_WSBEiJ_T0083969.1 MGP_WSBEiJ_G0031729.1 mouse_genomes_project 7 104142063 104239154 + MGP_WSBEiJ_P0083969 protein_coding protein_coding MGP_WSBEiJ_T0083970.1 MGP_WSBEiJ_G0031729.1 mouse_genomes_project 7 104142063 104239154 + MGP_WSBEiJ_P0083970 protein_coding protein_coding MGP_WSBEiJ_T0083971.1 MGP_WSBEiJ_G0031729.1 mouse_genomes_project 7 104142081 104239139 + MGP_WSBEiJ_P0083971 protein_coding protein_coding MGP_WSBEiJ_T0084229.1 MGP_WSBEiJ_G0031857.1 mouse_genomes_project 7 107281095 107296011 - MGP_WSBEiJ_P0084229 Trim30d protein_coding protein_coding MGP_WSBEiJ_T0084230.1 MGP_WSBEiJ_G0031857.1 mouse_genomes_project 7 107281275 107291447 - MGP_WSBEiJ_P0084230 Trim30d protein_coding protein_coding MGP_WSBEiJ_T0083148.1 MGP_WSBEiJ_G0031531.1 mouse_genomes_project 7 80354357 80366818 + Aen protein_coding processed_transcript MGP_WSBEiJ_T0083149.1 MGP_WSBEiJ_G0031531.1 mouse_genomes_project 7 80354430 80366818 + MGP_WSBEiJ_P0083149 Aen protein_coding protein_coding MGP_WSBEiJ_T0083150.1 MGP_WSBEiJ_G0031531.1 mouse_genomes_project 7 80354437 80363992 + MGP_WSBEiJ_P0083150 Aen protein_coding protein_coding MGP_WSBEiJ_T0083151.1 MGP_WSBEiJ_G0031531.1 mouse_genomes_project 7 80354512 80363989 + MGP_WSBEiJ_P0083151 Aen protein_coding protein_coding MGP_WSBEiJ_T0083152.1 MGP_WSBEiJ_G0031531.1 mouse_genomes_project 7 80356533 80358449 + MGP_WSBEiJ_P0083152 Aen protein_coding protein_coding MGP_WSBEiJ_T0083153.1 MGP_WSBEiJ_G0031531.1 mouse_genomes_project 7 80357987 80361620 + Aen protein_coding processed_transcript MGP_WSBEiJ_T0083154.1 MGP_WSBEiJ_G0031531.1 mouse_genomes_project 7 80358205 80362977 + MGP_WSBEiJ_P0083154 Aen protein_coding protein_coding MGP_WSBEiJ_T0010671.1 MGP_WSBEiJ_G0008828.1 mouse_genomes_project 7 25673516 25673604 - Mir3101 miRNA miRNA MGP_WSBEiJ_T0101058.1 MGP_WSBEiJ_G0039515.1 mouse_genomes_project 7 48742081 48742537 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0015386.1 MGP_WSBEiJ_G0013516.1 mouse_genomes_project 7 108765018 108765774 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086373.1 MGP_WSBEiJ_G0032392.1 mouse_genomes_project 7 147437835 147453516 - MGP_WSBEiJ_P0086373 protein_coding protein_coding MGP_WSBEiJ_T0086374.1 MGP_WSBEiJ_G0032392.1 mouse_genomes_project 7 147439511 147443733 - protein_coding processed_transcript MGP_WSBEiJ_T0085376.1 MGP_WSBEiJ_G0032164.1 mouse_genomes_project 7 131279376 131283994 + MGP_WSBEiJ_P0085376 Mylpf protein_coding protein_coding MGP_WSBEiJ_T0085377.1 MGP_WSBEiJ_G0032164.1 mouse_genomes_project 7 131282228 131284759 + MGP_WSBEiJ_P0085377 Mylpf protein_coding protein_coding MGP_WSBEiJ_T0085378.1 MGP_WSBEiJ_G0032164.1 mouse_genomes_project 7 131283150 131283959 + MGP_WSBEiJ_P0085378 Mylpf protein_coding protein_coding MGP_WSBEiJ_T0085379.1 MGP_WSBEiJ_G0032164.1 mouse_genomes_project 7 131283585 131283927 + Mylpf protein_coding retained_intron MGP_WSBEiJ_T0085380.1 MGP_WSBEiJ_G0032164.1 mouse_genomes_project 7 131284367 131284759 + Mylpf protein_coding retained_intron MGP_WSBEiJ_T0015319.1 MGP_WSBEiJ_G0013449.1 mouse_genomes_project 7 57731432 57731858 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015375.1 MGP_WSBEiJ_G0013505.1 mouse_genomes_project 7 103234451 103234804 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011504.1 MGP_WSBEiJ_G0009661.1 mouse_genomes_project 7 148293535 148293759 + Gm27539 misc_RNA misc_RNA MGP_WSBEiJ_T0080632.1 MGP_WSBEiJ_G0030910.1 mouse_genomes_project 7 17093471 17128952 + MGP_WSBEiJ_P0080632 Eml2 protein_coding protein_coding MGP_WSBEiJ_T0080633.1 MGP_WSBEiJ_G0030910.1 mouse_genomes_project 7 17100179 17129177 + MGP_WSBEiJ_P0080633 Eml2 protein_coding protein_coding MGP_WSBEiJ_T0080634.1 MGP_WSBEiJ_G0030910.1 mouse_genomes_project 7 17100190 17129173 + MGP_WSBEiJ_P0080634 Eml2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0080635.1 MGP_WSBEiJ_G0030910.1 mouse_genomes_project 7 17100213 17129174 + MGP_WSBEiJ_P0080635 Eml2 protein_coding protein_coding MGP_WSBEiJ_T0080636.1 MGP_WSBEiJ_G0030910.1 mouse_genomes_project 7 17100225 17103927 + MGP_WSBEiJ_P0080636 Eml2 protein_coding protein_coding MGP_WSBEiJ_T0080637.1 MGP_WSBEiJ_G0030910.1 mouse_genomes_project 7 17100246 17105368 + MGP_WSBEiJ_P0080637 Eml2 protein_coding protein_coding MGP_WSBEiJ_T0080638.1 MGP_WSBEiJ_G0030910.1 mouse_genomes_project 7 17100341 17103930 + Eml2 protein_coding processed_transcript MGP_WSBEiJ_T0080639.1 MGP_WSBEiJ_G0030910.1 mouse_genomes_project 7 17100615 17105381 + Eml2 protein_coding retained_intron MGP_WSBEiJ_T0084116.1 MGP_WSBEiJ_G0031772.1 mouse_genomes_project 7 105635282 105639189 - MGP_WSBEiJ_P0084116 Olfr566 protein_coding protein_coding MGP_WSBEiJ_T0083559.1 MGP_WSBEiJ_G0031635.1 mouse_genomes_project 7 89765807 90328120 + MGP_WSBEiJ_P0083559 Grm5 protein_coding protein_coding MGP_WSBEiJ_T0083560.1 MGP_WSBEiJ_G0031635.1 mouse_genomes_project 7 89783398 90323932 + MGP_WSBEiJ_P0083560 Grm5 protein_coding protein_coding MGP_WSBEiJ_T0083561.1 MGP_WSBEiJ_G0031635.1 mouse_genomes_project 7 89988276 89994767 + Grm5 protein_coding processed_transcript MGP_WSBEiJ_T0081595.1 MGP_WSBEiJ_G0031166.1 mouse_genomes_project 7 29239707 29246716 + MGP_WSBEiJ_P0081595 Nfkbid protein_coding protein_coding MGP_WSBEiJ_T0081596.1 MGP_WSBEiJ_G0031166.1 mouse_genomes_project 7 29240381 29246715 + MGP_WSBEiJ_P0081596 Nfkbid protein_coding protein_coding MGP_WSBEiJ_T0081597.1 MGP_WSBEiJ_G0031166.1 mouse_genomes_project 7 29241250 29246716 + MGP_WSBEiJ_P0081597 Nfkbid protein_coding protein_coding MGP_WSBEiJ_T0081598.1 MGP_WSBEiJ_G0031166.1 mouse_genomes_project 7 29243541 29244245 + Nfkbid protein_coding retained_intron MGP_WSBEiJ_T0100991.1 MGP_WSBEiJ_G0039448.1 mouse_genomes_project 7 12063757 12064775 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0084236.1 MGP_WSBEiJ_G0031862.1 mouse_genomes_project 7 107409622 107410549 - MGP_WSBEiJ_P0084236 Olfr655 protein_coding protein_coding MGP_WSBEiJ_T0098494.1 MGP_WSBEiJ_G0037157.1 mouse_genomes_project 7 93535896 93535999 + Gm24552 snRNA snRNA MGP_WSBEiJ_T0097665.1 MGP_WSBEiJ_G0036328.1 mouse_genomes_project 10 116634909 116635016 + Gm22070 snRNA snRNA MGP_WSBEiJ_T0096756.1 MGP_WSBEiJ_G0035437.1 mouse_genomes_project 10 57848435 57852911 + pseudogene pseudogene MGP_WSBEiJ_T0026237.1 MGP_WSBEiJ_G0017064.1 mouse_genomes_project 10 98311026 98349331 + MGP_WSBEiJ_P0026237 Dcn protein_coding protein_coding MGP_WSBEiJ_T0026238.1 MGP_WSBEiJ_G0017064.1 mouse_genomes_project 10 98313879 98349331 + MGP_WSBEiJ_P0026238 Dcn protein_coding protein_coding MGP_WSBEiJ_T0024213.1 MGP_WSBEiJ_G0016528.1 mouse_genomes_project 10 31521157 31639153 - MGP_WSBEiJ_P0024213 Clvs2 protein_coding protein_coding MGP_WSBEiJ_T0024214.1 MGP_WSBEiJ_G0016528.1 mouse_genomes_project 10 31558204 31638580 - Clvs2 protein_coding processed_transcript MGP_WSBEiJ_T0024215.1 MGP_WSBEiJ_G0016528.1 mouse_genomes_project 10 31602060 31639003 - Clvs2 protein_coding processed_transcript MGP_WSBEiJ_T0024216.1 MGP_WSBEiJ_G0016528.1 mouse_genomes_project 10 31606450 31639006 - MGP_WSBEiJ_P0024216 Clvs2 protein_coding protein_coding MGP_WSBEiJ_T0023881.1 MGP_WSBEiJ_G0016418.1 mouse_genomes_project 10 8423172 8441488 + MGP_WSBEiJ_P0023881 Fbxo30 protein_coding protein_coding MGP_WSBEiJ_T0023882.1 MGP_WSBEiJ_G0016418.1 mouse_genomes_project 10 8423429 8438957 + MGP_WSBEiJ_P0023882 Fbxo30 protein_coding protein_coding MGP_WSBEiJ_T0024300.1 MGP_WSBEiJ_G0016561.1 mouse_genomes_project 10 38341512 38462386 - MGP_WSBEiJ_P0024300 Slc16a10 protein_coding protein_coding MGP_WSBEiJ_T0024853.1 MGP_WSBEiJ_G0016724.1 mouse_genomes_project 10 67244261 67288879 - MGP_WSBEiJ_P0024853 Arid5b protein_coding unknown_likely_coding MGP_WSBEiJ_T0024854.1 MGP_WSBEiJ_G0016724.1 mouse_genomes_project 10 67247335 67437298 - MGP_WSBEiJ_P0024854 Arid5b protein_coding protein_coding MGP_WSBEiJ_T0026019.1 MGP_WSBEiJ_G0017015.1 mouse_genomes_project 10 88712165 88748327 + MGP_WSBEiJ_P0026019 Gnptab protein_coding protein_coding MGP_WSBEiJ_T0026020.1 MGP_WSBEiJ_G0017015.1 mouse_genomes_project 10 88712257 88748284 + MGP_WSBEiJ_P0026020 Gnptab protein_coding protein_coding MGP_WSBEiJ_T0026021.1 MGP_WSBEiJ_G0017015.1 mouse_genomes_project 10 88712257 88782836 + MGP_WSBEiJ_P0026021 Gnptab protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026022.1 MGP_WSBEiJ_G0017015.1 mouse_genomes_project 10 88712259 88782845 + MGP_WSBEiJ_P0026022 Gnptab protein_coding protein_coding MGP_WSBEiJ_T0026023.1 MGP_WSBEiJ_G0017015.1 mouse_genomes_project 10 88763534 88768615 + Gnptab protein_coding processed_transcript MGP_WSBEiJ_T0026024.1 MGP_WSBEiJ_G0017015.1 mouse_genomes_project 10 88768687 88776377 + Gnptab protein_coding processed_transcript MGP_WSBEiJ_T0026025.1 MGP_WSBEiJ_G0017015.1 mouse_genomes_project 10 88771369 88772055 + Gnptab protein_coding retained_intron MGP_WSBEiJ_T0025122.1 MGP_WSBEiJ_G0016775.1 mouse_genomes_project 10 75971366 76067168 - MGP_WSBEiJ_P0025122 Pcnt protein_coding protein_coding MGP_WSBEiJ_T0025123.1 MGP_WSBEiJ_G0016775.1 mouse_genomes_project 10 75971370 76066874 - MGP_WSBEiJ_P0025123 Pcnt protein_coding unknown_likely_coding MGP_WSBEiJ_T0011080.1 MGP_WSBEiJ_G0009237.1 mouse_genomes_project 10 78145914 78146222 - Gm22514 misc_RNA misc_RNA MGP_WSBEiJ_T0009495.1 MGP_WSBEiJ_G0007652.1 mouse_genomes_project 10 130868457 130868533 + Gm25361 miRNA miRNA MGP_WSBEiJ_T0026687.1 MGP_WSBEiJ_G0017215.1 mouse_genomes_project 10 130093235 130110177 + MGP_WSBEiJ_P0026687 Myo1a protein_coding protein_coding MGP_WSBEiJ_T0026688.1 MGP_WSBEiJ_G0017215.1 mouse_genomes_project 10 130093321 130122591 + MGP_WSBEiJ_P0026688 Myo1a protein_coding unknown_likely_coding MGP_WSBEiJ_T0025079.1 MGP_WSBEiJ_G0016760.1 mouse_genomes_project 10 75333191 75362261 - MGP_WSBEiJ_P0025079 Gstt1 protein_coding protein_coding MGP_WSBEiJ_T0025080.1 MGP_WSBEiJ_G0016760.1 mouse_genomes_project 10 75333362 75352818 - MGP_WSBEiJ_P0025080 Gstt1 protein_coding protein_coding MGP_WSBEiJ_T0025081.1 MGP_WSBEiJ_G0016760.1 mouse_genomes_project 10 75336394 75361408 - MGP_WSBEiJ_P0025081 Gstt1 protein_coding protein_coding MGP_WSBEiJ_T0025173.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76963127 77090957 - MGP_WSBEiJ_P0025173 Adarb1 protein_coding protein_coding MGP_WSBEiJ_T0025174.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76963127 77090952 - MGP_WSBEiJ_P0025174 Adarb1 protein_coding protein_coding MGP_WSBEiJ_T0025175.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76963128 77090957 - MGP_WSBEiJ_P0025175 Adarb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025176.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76963128 77090914 - MGP_WSBEiJ_P0025176 Adarb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025177.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76963128 77090914 - MGP_WSBEiJ_P0025177 Adarb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025178.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76963129 77090957 - MGP_WSBEiJ_P0025178 Adarb1 protein_coding protein_coding MGP_WSBEiJ_T0025179.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76992168 77090898 - Adarb1 protein_coding retained_intron MGP_WSBEiJ_T0025180.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76992182 77090952 - Adarb1 protein_coding retained_intron MGP_WSBEiJ_T0025181.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 76998688 77090925 - Adarb1 protein_coding retained_intron MGP_WSBEiJ_T0025182.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 77001236 77090537 - Adarb1 protein_coding retained_intron MGP_WSBEiJ_T0025183.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 77001427 77090904 - Adarb1 protein_coding retained_intron MGP_WSBEiJ_T0025184.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 77001613 77016055 - Adarb1 protein_coding retained_intron MGP_WSBEiJ_T0025185.1 MGP_WSBEiJ_G0016790.1 mouse_genomes_project 10 77001688 77042432 - Adarb1 protein_coding retained_intron MGP_WSBEiJ_T0024289.1 MGP_WSBEiJ_G0016556.1 mouse_genomes_project 10 38178690 38185928 - MGP_WSBEiJ_P0024289 Mfsd4b4 protein_coding protein_coding MGP_WSBEiJ_T0024290.1 MGP_WSBEiJ_G0016556.1 mouse_genomes_project 10 38178690 38189373 - MGP_WSBEiJ_P0024290 Mfsd4b4 protein_coding protein_coding MGP_WSBEiJ_T0023697.1 MGP_WSBEiJ_G0016378.1 mouse_genomes_project 10 659584 875024 + Plekhg1 protein_coding retained_intron MGP_WSBEiJ_T0023698.1 MGP_WSBEiJ_G0016378.1 mouse_genomes_project 10 660682 874977 + Plekhg1 protein_coding retained_intron MGP_WSBEiJ_T0023699.1 MGP_WSBEiJ_G0016378.1 mouse_genomes_project 10 795807 905548 + MGP_WSBEiJ_P0023699 Plekhg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023700.1 MGP_WSBEiJ_G0016378.1 mouse_genomes_project 10 804878 902794 + MGP_WSBEiJ_P0023700 Plekhg1 protein_coding protein_coding MGP_WSBEiJ_T0023701.1 MGP_WSBEiJ_G0016378.1 mouse_genomes_project 10 837539 852615 + Plekhg1 protein_coding retained_intron MGP_WSBEiJ_T0023702.1 MGP_WSBEiJ_G0016378.1 mouse_genomes_project 10 837543 905542 + MGP_WSBEiJ_P0023702 Plekhg1 protein_coding protein_coding MGP_WSBEiJ_T0023703.1 MGP_WSBEiJ_G0016378.1 mouse_genomes_project 10 896203 901771 + MGP_WSBEiJ_P0023703 Plekhg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026754.1 MGP_WSBEiJ_G0017238.1 mouse_genomes_project 10 130728464 130752866 + MGP_WSBEiJ_P0026754 Stat2 protein_coding protein_coding MGP_WSBEiJ_T0026755.1 MGP_WSBEiJ_G0017238.1 mouse_genomes_project 10 130728464 130752866 + MGP_WSBEiJ_P0026755 Stat2 protein_coding protein_coding MGP_WSBEiJ_T0026616.1 MGP_WSBEiJ_G0017199.1 mouse_genomes_project 10 129637057 129641002 - MGP_WSBEiJ_P0026616 Mbd6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026617.1 MGP_WSBEiJ_G0017199.1 mouse_genomes_project 10 129637057 129638770 - MGP_WSBEiJ_P0026617 Mbd6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026618.1 MGP_WSBEiJ_G0017199.1 mouse_genomes_project 10 129637057 129645187 - MGP_WSBEiJ_P0026618 Mbd6 protein_coding protein_coding MGP_WSBEiJ_T0026619.1 MGP_WSBEiJ_G0017199.1 mouse_genomes_project 10 129637057 129645315 - MGP_WSBEiJ_P0026619 Mbd6 protein_coding protein_coding MGP_WSBEiJ_T0026620.1 MGP_WSBEiJ_G0017199.1 mouse_genomes_project 10 129637777 129639460 - MGP_WSBEiJ_P0026620 Mbd6 protein_coding protein_coding MGP_WSBEiJ_T0026621.1 MGP_WSBEiJ_G0017199.1 mouse_genomes_project 10 129638627 129639473 - MGP_WSBEiJ_P0026621 Mbd6 protein_coding protein_coding MGP_WSBEiJ_T0024469.1 MGP_WSBEiJ_G0016617.1 mouse_genomes_project 10 50478079 50479102 - MGP_WSBEiJ_P0024469 4933411G06Rik protein_coding protein_coding MGP_WSBEiJ_T0026897.1 MGP_WSBEiJ_G0017314.1 mouse_genomes_project 10 132727455 132745460 - MGP_WSBEiJ_P0026897 protein_coding protein_coding MGP_WSBEiJ_T0100212.1 MGP_WSBEiJ_G0038768.1 mouse_genomes_project 10 130238835 130265381 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0024704.1 MGP_WSBEiJ_G0016688.1 mouse_genomes_project 10 60975242 60976916 + MGP_WSBEiJ_P0024704 Neurog3 protein_coding protein_coding MGP_WSBEiJ_T0023865.1 MGP_WSBEiJ_G0016414.1 mouse_genomes_project 10 7662705 7675859 - MGP_WSBEiJ_P0023865 Rab32 protein_coding protein_coding MGP_WSBEiJ_T0006060.1 MGP_WSBEiJ_G0005060.1 mouse_genomes_project 10 107656711 107666594 - lincRNA lincRNA MGP_WSBEiJ_T0023891.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10219705 10288850 + MGP_WSBEiJ_P0023891 Plagl1 protein_coding protein_coding MGP_WSBEiJ_T0023892.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251146 10286356 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023893.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251167 10286511 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023894.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251243 10286395 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023895.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251243 10292900 + MGP_WSBEiJ_P0023895 Plagl1 protein_coding protein_coding MGP_WSBEiJ_T0023896.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10274677 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023897.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10277176 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023898.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10277235 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023899.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10277158 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023900.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10277218 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023901.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10286476 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023902.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10269396 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023903.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10277174 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023904.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10266870 + Plagl1 protein_coding retained_intron MGP_WSBEiJ_T0023905.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10286413 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023906.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10286395 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023907.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10273033 + Plagl1 protein_coding processed_transcript MGP_WSBEiJ_T0023908.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251287 10292361 + MGP_WSBEiJ_P0023908 Plagl1 protein_coding protein_coding MGP_WSBEiJ_T0023909.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251290 10292348 + MGP_WSBEiJ_P0023909 Plagl1 protein_coding protein_coding MGP_WSBEiJ_T0023910.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251296 10273928 + Plagl1 protein_coding retained_intron MGP_WSBEiJ_T0023911.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251329 10273269 + Plagl1 protein_coding retained_intron MGP_WSBEiJ_T0023912.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251329 10273369 + Plagl1 protein_coding retained_intron MGP_WSBEiJ_T0023913.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10251468 10286526 + MGP_WSBEiJ_P0023913 Plagl1 protein_coding protein_coding MGP_WSBEiJ_T0023914.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10273948 10288837 + MGP_WSBEiJ_P0023914 Plagl1 protein_coding protein_coding MGP_WSBEiJ_T0023915.1 MGP_WSBEiJ_G0016423.1 mouse_genomes_project 10 10276817 10286563 + MGP_WSBEiJ_P0023915 Plagl1 protein_coding protein_coding MGP_WSBEiJ_T0025556.1 MGP_WSBEiJ_G0016891.1 mouse_genomes_project 10 80326209 80332890 - MGP_WSBEiJ_P0025556 Mbd3 protein_coding protein_coding MGP_WSBEiJ_T0025557.1 MGP_WSBEiJ_G0016891.1 mouse_genomes_project 10 80326210 80333209 - MGP_WSBEiJ_P0025557 Mbd3 protein_coding protein_coding MGP_WSBEiJ_T0025558.1 MGP_WSBEiJ_G0016891.1 mouse_genomes_project 10 80326510 80333081 - MGP_WSBEiJ_P0025558 Mbd3 protein_coding protein_coding MGP_WSBEiJ_T0025559.1 MGP_WSBEiJ_G0016891.1 mouse_genomes_project 10 80326653 80329387 - MGP_WSBEiJ_P0025559 Mbd3 protein_coding protein_coding MGP_WSBEiJ_T0025560.1 MGP_WSBEiJ_G0016891.1 mouse_genomes_project 10 80327563 80328994 - Mbd3 protein_coding processed_transcript MGP_WSBEiJ_T0026016.1 MGP_WSBEiJ_G0017014.1 mouse_genomes_project 10 88646424 88687203 - MGP_WSBEiJ_P0026016 Dram1 protein_coding protein_coding MGP_WSBEiJ_T0026017.1 MGP_WSBEiJ_G0017014.1 mouse_genomes_project 10 88646424 88687124 - MGP_WSBEiJ_P0026017 Dram1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026018.1 MGP_WSBEiJ_G0017014.1 mouse_genomes_project 10 88665717 88712114 - MGP_WSBEiJ_P0026018 Dram1 protein_coding protein_coding MGP_WSBEiJ_T0024191.1 MGP_WSBEiJ_G0016518.1 mouse_genomes_project 10 28384790 28454964 - MGP_WSBEiJ_P0024191 Trmt11 protein_coding protein_coding MGP_WSBEiJ_T0025369.1 MGP_WSBEiJ_G0016852.1 mouse_genomes_project 10 79692776 79703437 + MGP_WSBEiJ_P0025369 Misp protein_coding protein_coding MGP_WSBEiJ_T0025370.1 MGP_WSBEiJ_G0016852.1 mouse_genomes_project 10 79694383 79703437 + MGP_WSBEiJ_P0025370 Misp protein_coding protein_coding MGP_WSBEiJ_T0097618.1 MGP_WSBEiJ_G0036281.1 mouse_genomes_project 10 22573964 22574071 + Gm23410 snRNA snRNA MGP_WSBEiJ_T0025841.1 MGP_WSBEiJ_G0016962.1 mouse_genomes_project 10 82106461 82120662 + MGP_WSBEiJ_P0025841 Zfp873 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025842.1 MGP_WSBEiJ_G0016962.1 mouse_genomes_project 10 82116649 82120662 + MGP_WSBEiJ_P0025842 Zfp873 protein_coding protein_coding MGP_WSBEiJ_T0025412.1 MGP_WSBEiJ_G0016862.1 mouse_genomes_project 10 79810602 79839393 + MGP_WSBEiJ_P0025412 Arid3a protein_coding protein_coding MGP_WSBEiJ_T0025413.1 MGP_WSBEiJ_G0016862.1 mouse_genomes_project 10 79810698 79839085 + MGP_WSBEiJ_P0025413 Arid3a protein_coding protein_coding MGP_WSBEiJ_T0025414.1 MGP_WSBEiJ_G0016862.1 mouse_genomes_project 10 79810900 79839077 + MGP_WSBEiJ_P0025414 Arid3a protein_coding protein_coding MGP_WSBEiJ_T0025415.1 MGP_WSBEiJ_G0016862.1 mouse_genomes_project 10 79813845 79814640 + MGP_WSBEiJ_P0025415 Arid3a protein_coding protein_coding MGP_WSBEiJ_T0025416.1 MGP_WSBEiJ_G0016862.1 mouse_genomes_project 10 79830680 79837018 + Arid3a protein_coding processed_transcript MGP_WSBEiJ_T0026522.1 MGP_WSBEiJ_G0017163.1 mouse_genomes_project 10 123145995 123216255 + MGP_WSBEiJ_P0026522 Wif1 protein_coding protein_coding MGP_WSBEiJ_T0026523.1 MGP_WSBEiJ_G0017163.1 mouse_genomes_project 10 123146059 123216251 + MGP_WSBEiJ_P0026523 Wif1 protein_coding protein_coding MGP_WSBEiJ_T0026524.1 MGP_WSBEiJ_G0017163.1 mouse_genomes_project 10 123198160 123216242 + Wif1 protein_coding retained_intron MGP_WSBEiJ_T0000798.1 MGP_WSBEiJ_G0000737.1 mouse_genomes_project 10 106321575 106322282 - TEC TEC MGP_WSBEiJ_T0026599.1 MGP_WSBEiJ_G0017189.1 mouse_genomes_project 10 129405929 129408827 - MGP_WSBEiJ_P0026599 Tspan31 protein_coding protein_coding MGP_WSBEiJ_T0097628.1 MGP_WSBEiJ_G0036291.1 mouse_genomes_project 10 43817059 43817122 + Gm27723 snRNA snRNA MGP_WSBEiJ_T0025724.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81366560 81370993 - MGP_WSBEiJ_P0025724 Hmg20b protein_coding protein_coding MGP_WSBEiJ_T0025725.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81366563 81370882 - Hmg20b protein_coding retained_intron MGP_WSBEiJ_T0025726.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81366563 81370939 - MGP_WSBEiJ_P0025726 Hmg20b protein_coding protein_coding MGP_WSBEiJ_T0025727.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81366563 81370937 - MGP_WSBEiJ_P0025727 Hmg20b protein_coding protein_coding MGP_WSBEiJ_T0025728.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81366563 81370704 - MGP_WSBEiJ_P0025728 Hmg20b protein_coding protein_coding MGP_WSBEiJ_T0025729.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81366564 81367243 - Hmg20b protein_coding retained_intron MGP_WSBEiJ_T0025730.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81366564 81370840 - MGP_WSBEiJ_P0025730 Hmg20b protein_coding protein_coding MGP_WSBEiJ_T0025731.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81367271 81369598 - MGP_WSBEiJ_P0025731 Hmg20b protein_coding protein_coding MGP_WSBEiJ_T0025732.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81367509 81370956 - MGP_WSBEiJ_P0025732 Hmg20b protein_coding protein_coding MGP_WSBEiJ_T0025733.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81367510 81368435 - Hmg20b protein_coding retained_intron MGP_WSBEiJ_T0025734.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81369516 81370832 - Hmg20b protein_coding processed_transcript MGP_WSBEiJ_T0025735.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81369558 81370830 - Hmg20b protein_coding retained_intron MGP_WSBEiJ_T0025736.1 MGP_WSBEiJ_G0016943.1 mouse_genomes_project 10 81369568 81370957 - Hmg20b protein_coding processed_transcript MGP_WSBEiJ_T0011081.1 MGP_WSBEiJ_G0009238.1 mouse_genomes_project 10 92609825 92609980 - Gm27544 misc_RNA misc_RNA MGP_WSBEiJ_T0025101.1 MGP_WSBEiJ_G0016769.1 mouse_genomes_project 10 75531316 75595676 + MGP_WSBEiJ_P0025101 Gm5134 protein_coding protein_coding MGP_WSBEiJ_T0025102.1 MGP_WSBEiJ_G0016769.1 mouse_genomes_project 10 75556245 75583568 + Gm5134 protein_coding retained_intron MGP_WSBEiJ_T0024250.1 MGP_WSBEiJ_G0016549.1 mouse_genomes_project 10 37210222 37251750 + Lama4 protein_coding retained_intron MGP_WSBEiJ_T0024251.1 MGP_WSBEiJ_G0016549.1 mouse_genomes_project 10 37210222 37372162 + MGP_WSBEiJ_P0024251 Lama4 protein_coding protein_coding MGP_WSBEiJ_T0024252.1 MGP_WSBEiJ_G0016549.1 mouse_genomes_project 10 37210260 37294681 + Lama4 protein_coding retained_intron MGP_WSBEiJ_T0024253.1 MGP_WSBEiJ_G0016549.1 mouse_genomes_project 10 37210277 37282687 + Lama4 protein_coding retained_intron MGP_WSBEiJ_T0024254.1 MGP_WSBEiJ_G0016549.1 mouse_genomes_project 10 37210379 37302967 + Lama4 protein_coding retained_intron MGP_WSBEiJ_T0024255.1 MGP_WSBEiJ_G0016549.1 mouse_genomes_project 10 37302252 37306102 + Lama4 protein_coding retained_intron MGP_WSBEiJ_T0024256.1 MGP_WSBEiJ_G0016549.1 mouse_genomes_project 10 37367762 37372071 + Lama4 protein_coding retained_intron MGP_WSBEiJ_T0025770.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81526409 81536552 - MGP_WSBEiJ_P0025770 Ncln protein_coding protein_coding MGP_WSBEiJ_T0025771.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81526617 81536486 - MGP_WSBEiJ_P0025771 Ncln protein_coding protein_coding MGP_WSBEiJ_T0025772.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81527258 81528558 - Ncln protein_coding retained_intron MGP_WSBEiJ_T0025773.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81527450 81528378 - MGP_WSBEiJ_P0025773 Ncln protein_coding protein_coding MGP_WSBEiJ_T0025774.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81527500 81528804 - Ncln protein_coding retained_intron MGP_WSBEiJ_T0025775.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81527540 81528802 - Ncln protein_coding retained_intron MGP_WSBEiJ_T0025776.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81528386 81530429 - Ncln protein_coding retained_intron MGP_WSBEiJ_T0025777.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81531085 81532216 - Ncln protein_coding retained_intron MGP_WSBEiJ_T0025778.1 MGP_WSBEiJ_G0016951.1 mouse_genomes_project 10 81533483 81536502 - Ncln protein_coding retained_intron MGP_WSBEiJ_T0026550.1 MGP_WSBEiJ_G0017174.1 mouse_genomes_project 10 124817777 125021579 + Ppm1h protein_coding retained_intron MGP_WSBEiJ_T0026551.1 MGP_WSBEiJ_G0017174.1 mouse_genomes_project 10 124817793 125067575 + MGP_WSBEiJ_P0026551 Ppm1h protein_coding protein_coding MGP_WSBEiJ_T0026552.1 MGP_WSBEiJ_G0017174.1 mouse_genomes_project 10 124817797 125090549 + MGP_WSBEiJ_P0026552 Ppm1h protein_coding protein_coding MGP_WSBEiJ_T0026553.1 MGP_WSBEiJ_G0017174.1 mouse_genomes_project 10 124896741 124957271 + Ppm1h protein_coding processed_transcript MGP_WSBEiJ_T0026554.1 MGP_WSBEiJ_G0017174.1 mouse_genomes_project 10 124957043 124962512 + Ppm1h protein_coding retained_intron MGP_WSBEiJ_T0026555.1 MGP_WSBEiJ_G0017174.1 mouse_genomes_project 10 124957201 125086041 + Ppm1h protein_coding retained_intron MGP_WSBEiJ_T0026556.1 MGP_WSBEiJ_G0017174.1 mouse_genomes_project 10 124957246 125029235 + Ppm1h protein_coding processed_transcript MGP_WSBEiJ_T0026557.1 MGP_WSBEiJ_G0017174.1 mouse_genomes_project 10 125038191 125086202 + MGP_WSBEiJ_P0026557 Ppm1h protein_coding protein_coding MGP_WSBEiJ_T0006032.1 MGP_WSBEiJ_G0005046.1 mouse_genomes_project 10 84800713 84803958 - Gm17249 lincRNA lincRNA MGP_WSBEiJ_T0025296.1 MGP_WSBEiJ_G0016825.1 mouse_genomes_project 10 78646493 78735533 + MGP_WSBEiJ_P0025296 protein_coding protein_coding MGP_WSBEiJ_T0025297.1 MGP_WSBEiJ_G0016825.1 mouse_genomes_project 10 78646509 78735226 + MGP_WSBEiJ_P0025297 protein_coding protein_coding MGP_WSBEiJ_T0012201.1 MGP_WSBEiJ_G0010331.1 mouse_genomes_project 10 131171727 131180104 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025074.1 MGP_WSBEiJ_G0016759.1 mouse_genomes_project 10 75323407 75330793 - MGP_WSBEiJ_P0025074 Gstt3 protein_coding protein_coding MGP_WSBEiJ_T0025075.1 MGP_WSBEiJ_G0016759.1 mouse_genomes_project 10 75324092 75326530 - Gstt3 protein_coding processed_transcript MGP_WSBEiJ_T0025076.1 MGP_WSBEiJ_G0016759.1 mouse_genomes_project 10 75324212 75330397 - MGP_WSBEiJ_P0025076 Gstt3 protein_coding protein_coding MGP_WSBEiJ_T0025077.1 MGP_WSBEiJ_G0016759.1 mouse_genomes_project 10 75324686 75326133 - MGP_WSBEiJ_P0025077 Gstt3 protein_coding protein_coding MGP_WSBEiJ_T0025078.1 MGP_WSBEiJ_G0016759.1 mouse_genomes_project 10 75326022 75330429 - MGP_WSBEiJ_P0025078 Gstt3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000782.1 MGP_WSBEiJ_G0000722.1 mouse_genomes_project 10 11535317 11536143 + TEC TEC MGP_WSBEiJ_T0023757.1 MGP_WSBEiJ_G0016394.1 mouse_genomes_project 10 3796999 3812630 - MGP_WSBEiJ_P0023757 Gm10945 protein_coding protein_coding MGP_WSBEiJ_T0026475.1 MGP_WSBEiJ_G0017153.1 mouse_genomes_project 10 121170331 121215684 - MGP_WSBEiJ_P0026475 Cand1 protein_coding protein_coding MGP_WSBEiJ_T0026476.1 MGP_WSBEiJ_G0017153.1 mouse_genomes_project 10 121177385 121179274 - Cand1 protein_coding retained_intron MGP_WSBEiJ_T0026477.1 MGP_WSBEiJ_G0017153.1 mouse_genomes_project 10 121182844 121183675 - Cand1 protein_coding retained_intron MGP_WSBEiJ_T0026478.1 MGP_WSBEiJ_G0017153.1 mouse_genomes_project 10 121188902 121214932 - MGP_WSBEiJ_P0026478 Cand1 protein_coding protein_coding MGP_WSBEiJ_T0025924.1 MGP_WSBEiJ_G0016988.1 mouse_genomes_project 10 85299956 85315718 + MGP_WSBEiJ_P0025924 Tmem263 protein_coding protein_coding MGP_WSBEiJ_T0005995.1 MGP_WSBEiJ_G0005016.1 mouse_genomes_project 10 21758025 21764969 + Gm15137 lincRNA lincRNA MGP_WSBEiJ_T0024342.1 MGP_WSBEiJ_G0016577.1 mouse_genomes_project 10 39906879 39932116 + MGP_WSBEiJ_P0024342 Ppil6 protein_coding protein_coding MGP_WSBEiJ_T0024343.1 MGP_WSBEiJ_G0016577.1 mouse_genomes_project 10 39918335 39932034 + MGP_WSBEiJ_P0024343 Ppil6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0097621.1 MGP_WSBEiJ_G0036284.1 mouse_genomes_project 10 28806657 28806764 - Gm24168 snRNA snRNA MGP_WSBEiJ_T0023754.1 MGP_WSBEiJ_G0016393.1 mouse_genomes_project 10 2866304 2966669 - MGP_WSBEiJ_P0023754 Rgs17 protein_coding protein_coding MGP_WSBEiJ_T0023755.1 MGP_WSBEiJ_G0016393.1 mouse_genomes_project 10 2866304 2966683 - MGP_WSBEiJ_P0023755 Rgs17 protein_coding protein_coding MGP_WSBEiJ_T0023756.1 MGP_WSBEiJ_G0016393.1 mouse_genomes_project 10 2873722 2966649 - MGP_WSBEiJ_P0023756 Rgs17 protein_coding protein_coding MGP_WSBEiJ_T0026474.1 MGP_WSBEiJ_G0017152.1 mouse_genomes_project 10 120811824 120821344 - MGP_WSBEiJ_P0026474 Dyrk2 protein_coding protein_coding MGP_WSBEiJ_T0009478.1 MGP_WSBEiJ_G0007635.1 mouse_genomes_project 10 109745046 109745140 + Gm25591 miRNA miRNA MGP_WSBEiJ_T0098832.1 MGP_WSBEiJ_G0037495.1 mouse_genomes_project 10 9093742 9093868 + Gm25011 snoRNA snoRNA MGP_WSBEiJ_T0023704.1 MGP_WSBEiJ_G0016379.1 mouse_genomes_project 10 911271 1114367 + MGP_WSBEiJ_P0023704 Mthfd1l protein_coding protein_coding MGP_WSBEiJ_T0023705.1 MGP_WSBEiJ_G0016379.1 mouse_genomes_project 10 911284 1128967 + MGP_WSBEiJ_P0023705 Mthfd1l protein_coding protein_coding MGP_WSBEiJ_T0023706.1 MGP_WSBEiJ_G0016379.1 mouse_genomes_project 10 911297 1114367 + MGP_WSBEiJ_P0023706 Mthfd1l protein_coding protein_coding MGP_WSBEiJ_T0023707.1 MGP_WSBEiJ_G0016379.1 mouse_genomes_project 10 977801 996157 + Mthfd1l protein_coding processed_transcript MGP_WSBEiJ_T0097629.1 MGP_WSBEiJ_G0036292.1 mouse_genomes_project 10 44976393 44976500 + Gm25740 snRNA snRNA MGP_WSBEiJ_T0024053.1 MGP_WSBEiJ_G0016464.1 mouse_genomes_project 10 18770977 18848026 + MGP_WSBEiJ_P0024053 protein_coding protein_coding MGP_WSBEiJ_T0024054.1 MGP_WSBEiJ_G0016464.1 mouse_genomes_project 10 18770977 18789170 + MGP_WSBEiJ_P0024054 protein_coding protein_coding MGP_WSBEiJ_T0005998.1 MGP_WSBEiJ_G0005019.1 mouse_genomes_project 10 35553884 35595813 + Gm26535 lincRNA lincRNA MGP_WSBEiJ_T0025450.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80013657 80029540 + MGP_WSBEiJ_P0025450 Stk11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025451.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80013657 80029753 + MGP_WSBEiJ_P0025451 Stk11 protein_coding protein_coding MGP_WSBEiJ_T0025452.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80014201 80029541 + MGP_WSBEiJ_P0025452 Stk11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025453.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80014208 80015670 + Stk11 protein_coding processed_transcript MGP_WSBEiJ_T0025454.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80014471 80029494 + MGP_WSBEiJ_P0025454 Stk11 protein_coding protein_coding MGP_WSBEiJ_T0025455.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80023884 80029041 + Stk11 protein_coding retained_intron MGP_WSBEiJ_T0025456.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80024440 80025575 + Stk11 protein_coding retained_intron MGP_WSBEiJ_T0025457.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80025451 80027265 + Stk11 protein_coding retained_intron MGP_WSBEiJ_T0025458.1 MGP_WSBEiJ_G0016872.1 mouse_genomes_project 10 80025747 80029541 + MGP_WSBEiJ_P0025458 Stk11 protein_coding protein_coding MGP_WSBEiJ_T0006063.1 MGP_WSBEiJ_G0005063.1 mouse_genomes_project 10 114299633 114371385 + 1700010J16Rik lincRNA lincRNA MGP_WSBEiJ_T0006064.1 MGP_WSBEiJ_G0005063.1 mouse_genomes_project 10 114299671 114371388 + 1700010J16Rik lincRNA lincRNA MGP_WSBEiJ_T0006071.1 MGP_WSBEiJ_G0005067.1 mouse_genomes_project 10 121042656 121054760 + 1700064J06Rik lincRNA lincRNA MGP_WSBEiJ_T0016500.1 MGP_WSBEiJ_G0014547.1 mouse_genomes_project 10 4769860 4787980 - Gm20470 processed_transcript processed_transcript MGP_WSBEiJ_T0025334.1 MGP_WSBEiJ_G0016840.1 mouse_genomes_project 10 79527596 79531559 + MGP_WSBEiJ_P0025334 Madcam1 protein_coding protein_coding MGP_WSBEiJ_T0025593.1 MGP_WSBEiJ_G0016899.1 mouse_genomes_project 10 80560062 80567608 + MGP_WSBEiJ_P0025593 Adat3 protein_coding protein_coding MGP_WSBEiJ_T0025596.1 MGP_WSBEiJ_G0016899.1 mouse_genomes_project 10 80565988 80575702 + MGP_WSBEiJ_P0025596 Adat3 protein_coding protein_coding MGP_WSBEiJ_T0024693.1 MGP_WSBEiJ_G0016686.1 mouse_genomes_project 10 60907666 60909382 + MGP_WSBEiJ_P0024693 Gm5424 protein_coding protein_coding MGP_WSBEiJ_T0009474.1 MGP_WSBEiJ_G0007631.1 mouse_genomes_project 10 98248523 98248608 + Mir3966 miRNA miRNA MGP_WSBEiJ_T0024470.1 MGP_WSBEiJ_G0016618.1 mouse_genomes_project 10 50752643 50758605 + MGP_WSBEiJ_P0024470 Vgll2 protein_coding protein_coding MGP_WSBEiJ_T0024471.1 MGP_WSBEiJ_G0016618.1 mouse_genomes_project 10 50752669 50758477 + MGP_WSBEiJ_P0024471 Vgll2 protein_coding protein_coding MGP_WSBEiJ_T0009422.1 MGP_WSBEiJ_G0007579.1 mouse_genomes_project 10 17730416 17730524 - Mir6413 miRNA miRNA MGP_WSBEiJ_T0025411.1 MGP_WSBEiJ_G0016861.1 mouse_genomes_project 10 79798808 79804087 + MGP_WSBEiJ_P0025411 Kiss1r protein_coding protein_coding MGP_WSBEiJ_T0011071.1 MGP_WSBEiJ_G0009228.1 mouse_genomes_project 10 10252036 10252275 - Gm27741 misc_RNA misc_RNA MGP_WSBEiJ_T0100450.1 MGP_WSBEiJ_G0038909.1 mouse_genomes_project 10 98014820 98014998 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009434.1 MGP_WSBEiJ_G0007591.1 mouse_genomes_project 10 57570101 57570303 + Gm27672 miRNA miRNA MGP_WSBEiJ_T0100460.1 MGP_WSBEiJ_G0038919.1 mouse_genomes_project 10 132386524 132387349 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0026323.1 MGP_WSBEiJ_G0017096.1 mouse_genomes_project 10 108749662 108751540 - MGP_WSBEiJ_P0026323 Myf6 protein_coding protein_coding MGP_WSBEiJ_T0025553.1 MGP_WSBEiJ_G0016890.1 mouse_genomes_project 10 80311768 80321336 - MGP_WSBEiJ_P0025553 Mex3d protein_coding protein_coding MGP_WSBEiJ_T0025554.1 MGP_WSBEiJ_G0016890.1 mouse_genomes_project 10 80311770 80320405 - MGP_WSBEiJ_P0025554 Mex3d protein_coding protein_coding MGP_WSBEiJ_T0025555.1 MGP_WSBEiJ_G0016890.1 mouse_genomes_project 10 80311867 80313401 - MGP_WSBEiJ_P0025555 Mex3d protein_coding protein_coding MGP_WSBEiJ_T0006019.1 MGP_WSBEiJ_G0005036.1 mouse_genomes_project 10 70654418 70657742 + Gm20609 lincRNA lincRNA MGP_WSBEiJ_T0012193.1 MGP_WSBEiJ_G0010323.1 mouse_genomes_project 10 104765387 104766383 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024574.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58366664 58524987 + MGP_WSBEiJ_P0024574 Micu1 protein_coding protein_coding MGP_WSBEiJ_T0024575.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58366750 58410133 + Micu1 protein_coding retained_intron MGP_WSBEiJ_T0024576.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58366786 58524985 + MGP_WSBEiJ_P0024576 Micu1 protein_coding protein_coding MGP_WSBEiJ_T0024577.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58366805 58524985 + MGP_WSBEiJ_P0024577 Micu1 protein_coding protein_coding MGP_WSBEiJ_T0024578.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58366815 58524978 + MGP_WSBEiJ_P0024578 Micu1 protein_coding protein_coding MGP_WSBEiJ_T0024579.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58366836 58454910 + MGP_WSBEiJ_P0024579 Micu1 protein_coding protein_coding MGP_WSBEiJ_T0024580.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58366845 58417808 + Micu1 protein_coding retained_intron MGP_WSBEiJ_T0024581.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58405318 58405993 + Micu1 protein_coding processed_transcript MGP_WSBEiJ_T0024582.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58406008 58423339 + MGP_WSBEiJ_P0024582 Micu1 protein_coding protein_coding MGP_WSBEiJ_T0024583.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58428570 58455008 + Micu1 protein_coding processed_transcript MGP_WSBEiJ_T0024584.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58493525 58506635 + Micu1 protein_coding retained_intron MGP_WSBEiJ_T0024585.1 MGP_WSBEiJ_G0016656.1 mouse_genomes_project 10 58522389 58524258 + Micu1 protein_coding retained_intron MGP_WSBEiJ_T0025186.1 MGP_WSBEiJ_G0016791.1 mouse_genomes_project 10 77166479 77195700 - MGP_WSBEiJ_P0025186 Fam207a protein_coding protein_coding MGP_WSBEiJ_T0025271.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78040026 78128397 - MGP_WSBEiJ_P0025271 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025272.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78042406 78127820 - MGP_WSBEiJ_P0025272 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025273.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78042406 78069052 - MGP_WSBEiJ_P0025273 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025274.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78042406 78128008 - MGP_WSBEiJ_P0025274 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025275.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78042406 78127655 - MGP_WSBEiJ_P0025275 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025276.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78044454 78066248 - MGP_WSBEiJ_P0025276 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025277.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78044457 78049275 - Agpat3 protein_coding retained_intron MGP_WSBEiJ_T0025278.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78055092 78094350 - MGP_WSBEiJ_P0025278 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025279.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78055138 78079421 - MGP_WSBEiJ_P0025279 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025280.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78058690 78128444 - MGP_WSBEiJ_P0025280 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0025281.1 MGP_WSBEiJ_G0016813.1 mouse_genomes_project 10 78058701 78128167 - MGP_WSBEiJ_P0025281 Agpat3 protein_coding protein_coding MGP_WSBEiJ_T0024228.1 MGP_WSBEiJ_G0016539.1 mouse_genomes_project 10 32169391 32232486 - MGP_WSBEiJ_P0024228 Dse protein_coding protein_coding MGP_WSBEiJ_T0024200.1 MGP_WSBEiJ_G0016523.1 mouse_genomes_project 10 29186905 29204832 + MGP_WSBEiJ_P0024200 Hddc2 protein_coding protein_coding MGP_WSBEiJ_T0024201.1 MGP_WSBEiJ_G0016523.1 mouse_genomes_project 10 29186928 29190554 + Hddc2 protein_coding retained_intron MGP_WSBEiJ_T0024202.1 MGP_WSBEiJ_G0016523.1 mouse_genomes_project 10 29186930 29191365 + Hddc2 protein_coding retained_intron MGP_WSBEiJ_T0024203.1 MGP_WSBEiJ_G0016523.1 mouse_genomes_project 10 29186995 29204812 + MGP_WSBEiJ_P0024203 Hddc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024204.1 MGP_WSBEiJ_G0016523.1 mouse_genomes_project 10 29193687 29204830 + Hddc2 protein_coding retained_intron MGP_WSBEiJ_T0024095.1 MGP_WSBEiJ_G0016478.1 mouse_genomes_project 10 21467574 21479897 + MGP_WSBEiJ_P0024095 Vnn3 protein_coding protein_coding MGP_WSBEiJ_T0011091.1 MGP_WSBEiJ_G0009248.1 mouse_genomes_project 10 110453600 110453878 - Gm22097 misc_RNA misc_RNA MGP_WSBEiJ_T0026444.1 MGP_WSBEiJ_G0017144.1 mouse_genomes_project 10 119109952 119126437 - MGP_WSBEiJ_P0026444 protein_coding protein_coding MGP_WSBEiJ_T0098883.1 MGP_WSBEiJ_G0037546.1 mouse_genomes_project 10 130384469 130384600 - Gm23996 snoRNA snoRNA MGP_WSBEiJ_T0023949.1 MGP_WSBEiJ_G0016432.1 mouse_genomes_project 10 11634457 11789328 - MGP_WSBEiJ_P0023949 Adgrg6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023950.1 MGP_WSBEiJ_G0016432.1 mouse_genomes_project 10 11634578 11789288 - MGP_WSBEiJ_P0023950 Adgrg6 protein_coding protein_coding MGP_WSBEiJ_T0098837.1 MGP_WSBEiJ_G0037500.1 mouse_genomes_project 10 21390491 21390620 - Snora33 snoRNA snoRNA MGP_WSBEiJ_T0024208.1 MGP_WSBEiJ_G0016525.1 mouse_genomes_project 10 29374352 29494927 - MGP_WSBEiJ_P0024208 Rnf217 protein_coding protein_coding MGP_WSBEiJ_T0023890.1 MGP_WSBEiJ_G0016422.1 mouse_genomes_project 10 10155932 10159777 + MGP_WSBEiJ_P0023890 Sf3b5 protein_coding protein_coding MGP_WSBEiJ_T0026865.1 MGP_WSBEiJ_G0017291.1 mouse_genomes_project 10 132030491 132031514 + MGP_WSBEiJ_P0026865 Olfr787 protein_coding protein_coding MGP_WSBEiJ_T0009430.1 MGP_WSBEiJ_G0007587.1 mouse_genomes_project 10 43480264 43480375 - Gm24271 miRNA miRNA MGP_WSBEiJ_T0025985.1 MGP_WSBEiJ_G0017006.1 mouse_genomes_project 10 87343292 87508254 + MGP_WSBEiJ_P0025985 1700113H08Rik protein_coding protein_coding MGP_WSBEiJ_T0025986.1 MGP_WSBEiJ_G0017006.1 mouse_genomes_project 10 87343293 87508253 + MGP_WSBEiJ_P0025986 1700113H08Rik protein_coding protein_coding MGP_WSBEiJ_T0025987.1 MGP_WSBEiJ_G0017006.1 mouse_genomes_project 10 87483659 87508252 + MGP_WSBEiJ_P0025987 1700113H08Rik protein_coding protein_coding MGP_WSBEiJ_T0025911.1 MGP_WSBEiJ_G0016983.1 mouse_genomes_project 10 84754993 84794132 + MGP_WSBEiJ_P0025911 Tcp11l2 protein_coding protein_coding MGP_WSBEiJ_T0025912.1 MGP_WSBEiJ_G0016983.1 mouse_genomes_project 10 84755264 84773624 + Tcp11l2 protein_coding retained_intron MGP_WSBEiJ_T0025913.1 MGP_WSBEiJ_G0016983.1 mouse_genomes_project 10 84772976 84784763 + Tcp11l2 protein_coding retained_intron MGP_WSBEiJ_T0098847.1 MGP_WSBEiJ_G0037510.1 mouse_genomes_project 10 38422064 38422193 + Gm25613 snoRNA snoRNA MGP_WSBEiJ_T0002537.1 MGP_WSBEiJ_G0002445.1 mouse_genomes_project 10 32549201 32549852 + MGP_WSBEiJ_P0002537 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002538.1 MGP_WSBEiJ_G0002445.1 mouse_genomes_project 10 32549456 32549852 + MGP_WSBEiJ_P0002538 TR_V_gene TR_V_gene MGP_WSBEiJ_T0024357.1 MGP_WSBEiJ_G0016580.1 mouse_genomes_project 10 40046562 40072211 - MGP_WSBEiJ_P0024357 protein_coding protein_coding MGP_WSBEiJ_T0026317.1 MGP_WSBEiJ_G0017093.1 mouse_genomes_project 10 108166856 108376603 - MGP_WSBEiJ_P0026317 Acss3 protein_coding protein_coding MGP_WSBEiJ_T0026318.1 MGP_WSBEiJ_G0017093.1 mouse_genomes_project 10 108199971 108376603 - MGP_WSBEiJ_P0026318 Acss3 protein_coding protein_coding MGP_WSBEiJ_T0026319.1 MGP_WSBEiJ_G0017093.1 mouse_genomes_project 10 108355134 108376584 - Acss3 protein_coding processed_transcript MGP_WSBEiJ_T0025104.1 MGP_WSBEiJ_G0016771.1 mouse_genomes_project 10 75753063 75796320 + MGP_WSBEiJ_P0025104 Slc5a4a protein_coding protein_coding MGP_WSBEiJ_T0024949.1 MGP_WSBEiJ_G0016738.1 mouse_genomes_project 10 70590666 70625502 - MGP_WSBEiJ_P0024949 Ube2d1 protein_coding protein_coding MGP_WSBEiJ_T0024950.1 MGP_WSBEiJ_G0016738.1 mouse_genomes_project 10 70591344 70592601 - Ube2d1 protein_coding retained_intron MGP_WSBEiJ_T0024951.1 MGP_WSBEiJ_G0016738.1 mouse_genomes_project 10 70594831 70625458 - Ube2d1 protein_coding retained_intron MGP_WSBEiJ_T0025594.1 MGP_WSBEiJ_G0016900.1 mouse_genomes_project 10 80560064 80575702 + MGP_WSBEiJ_P0025594 Scamp4 protein_coding protein_coding MGP_WSBEiJ_T0025595.1 MGP_WSBEiJ_G0016900.1 mouse_genomes_project 10 80560435 80574882 + MGP_WSBEiJ_P0025595 Scamp4 protein_coding protein_coding MGP_WSBEiJ_T0026876.1 MGP_WSBEiJ_G0017300.1 mouse_genomes_project 10 132226045 132228185 + MGP_WSBEiJ_P0026876 Olfr800 protein_coding protein_coding MGP_WSBEiJ_T0026877.1 MGP_WSBEiJ_G0017300.1 mouse_genomes_project 10 132227249 132228185 + MGP_WSBEiJ_P0026877 Olfr800 protein_coding protein_coding MGP_WSBEiJ_T0026601.1 MGP_WSBEiJ_G0017191.1 mouse_genomes_project 10 129434412 129464542 - MGP_WSBEiJ_P0026601 Os9 protein_coding protein_coding MGP_WSBEiJ_T0026602.1 MGP_WSBEiJ_G0017191.1 mouse_genomes_project 10 129434412 129464542 - MGP_WSBEiJ_P0026602 Os9 protein_coding protein_coding MGP_WSBEiJ_T0026851.1 MGP_WSBEiJ_G0017281.1 mouse_genomes_project 10 131763287 131764223 - MGP_WSBEiJ_P0026851 Olfr773 protein_coding protein_coding MGP_WSBEiJ_T0024429.1 MGP_WSBEiJ_G0016600.1 mouse_genomes_project 10 42421762 42470977 + MGP_WSBEiJ_P0024429 Rtn4ip1 protein_coding protein_coding MGP_WSBEiJ_T0024430.1 MGP_WSBEiJ_G0016600.1 mouse_genomes_project 10 42422344 42470986 + MGP_WSBEiJ_P0024430 Rtn4ip1 protein_coding protein_coding MGP_WSBEiJ_T0024190.1 MGP_WSBEiJ_G0016517.1 mouse_genomes_project 10 28050465 28054983 - MGP_WSBEiJ_P0024190 Cenpw protein_coding protein_coding MGP_WSBEiJ_T0009431.1 MGP_WSBEiJ_G0007588.1 mouse_genomes_project 10 43655697 43655772 - Gm23766 miRNA miRNA MGP_WSBEiJ_T0026312.1 MGP_WSBEiJ_G0017091.1 mouse_genomes_project 10 107056243 107064063 + Ccdc59 protein_coding retained_intron MGP_WSBEiJ_T0026313.1 MGP_WSBEiJ_G0017091.1 mouse_genomes_project 10 107056243 107064063 + MGP_WSBEiJ_P0026313 Ccdc59 protein_coding protein_coding MGP_WSBEiJ_T0026314.1 MGP_WSBEiJ_G0017091.1 mouse_genomes_project 10 107056680 107058149 + Ccdc59 protein_coding retained_intron MGP_WSBEiJ_T0002539.1 MGP_WSBEiJ_G0002446.1 mouse_genomes_project 10 32562257 32565382 + MGP_WSBEiJ_P0002539 TR_V_gene TR_V_gene MGP_WSBEiJ_T0024759.1 MGP_WSBEiJ_G0016701.1 mouse_genomes_project 10 61648346 61700766 - MGP_WSBEiJ_P0024759 protein_coding protein_coding MGP_WSBEiJ_T0024760.1 MGP_WSBEiJ_G0016701.1 mouse_genomes_project 10 61670878 61700725 - MGP_WSBEiJ_P0024760 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024120.1 MGP_WSBEiJ_G0016496.1 mouse_genomes_project 10 22438363 22512718 - MGP_WSBEiJ_P0024120 Enpp3 protein_coding protein_coding MGP_WSBEiJ_T0024139.1 MGP_WSBEiJ_G0016500.1 mouse_genomes_project 10 23059958 23237110 + MGP_WSBEiJ_P0024139 Epb41l2 protein_coding protein_coding MGP_WSBEiJ_T0024140.1 MGP_WSBEiJ_G0016500.1 mouse_genomes_project 10 23059971 23199848 + MGP_WSBEiJ_P0024140 Epb41l2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024141.1 MGP_WSBEiJ_G0016500.1 mouse_genomes_project 10 23115953 23237110 + MGP_WSBEiJ_P0024141 Epb41l2 protein_coding protein_coding MGP_WSBEiJ_T0024142.1 MGP_WSBEiJ_G0016500.1 mouse_genomes_project 10 23203966 23237113 + MGP_WSBEiJ_P0024142 Epb41l2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0005981.1 MGP_WSBEiJ_G0005007.1 mouse_genomes_project 10 8382256 8422842 - 4930432B10Rik lincRNA lincRNA MGP_WSBEiJ_T0005982.1 MGP_WSBEiJ_G0005007.1 mouse_genomes_project 10 8393304 8423064 - 4930432B10Rik lincRNA lincRNA MGP_WSBEiJ_T0002957.1 MGP_WSBEiJ_G0002772.1 mouse_genomes_project 10 39972278 39975069 + Gm17196 antisense antisense MGP_WSBEiJ_T0002971.1 MGP_WSBEiJ_G0002784.1 mouse_genomes_project 10 62196324 62197396 - 1700120B22Rik antisense antisense MGP_WSBEiJ_T0026528.1 MGP_WSBEiJ_G0017167.1 mouse_genomes_project 10 123673490 123713309 - MGP_WSBEiJ_P0026528 Tbk1 protein_coding protein_coding MGP_WSBEiJ_T0026503.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122249794 122251405 + Tmbim4 protein_coding processed_transcript MGP_WSBEiJ_T0026504.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122249816 122251398 + Tmbim4 protein_coding processed_transcript MGP_WSBEiJ_T0026505.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122249862 122267218 + MGP_WSBEiJ_P0026505 Tmbim4 protein_coding protein_coding MGP_WSBEiJ_T0026506.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122250855 122251398 + Tmbim4 protein_coding processed_transcript MGP_WSBEiJ_T0026507.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122257639 122274448 + MGP_WSBEiJ_P0026507 Tmbim4 protein_coding protein_coding MGP_WSBEiJ_T0026508.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122257669 122267373 + MGP_WSBEiJ_P0026508 Tmbim4 protein_coding protein_coding MGP_WSBEiJ_T0026509.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122257682 122274370 + MGP_WSBEiJ_P0026509 Tmbim4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026510.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122270362 122274270 + Tmbim4 protein_coding retained_intron MGP_WSBEiJ_T0026511.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122271502 122273803 + Tmbim4 protein_coding retained_intron MGP_WSBEiJ_T0026512.1 MGP_WSBEiJ_G0017157.1 mouse_genomes_project 10 122271502 122274448 + Tmbim4 protein_coding retained_intron MGP_WSBEiJ_T0005994.1 MGP_WSBEiJ_G0005015.1 mouse_genomes_project 10 19310348 19325640 - Platr6 lincRNA lincRNA MGP_WSBEiJ_T0026342.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112155721 112159041 + E2f7 protein_coding processed_transcript MGP_WSBEiJ_T0026343.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112155747 112167449 + MGP_WSBEiJ_P0026343 E2f7 protein_coding protein_coding MGP_WSBEiJ_T0026344.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112155750 112178932 + E2f7 protein_coding retained_intron MGP_WSBEiJ_T0026345.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112155750 112200422 + MGP_WSBEiJ_P0026345 E2f7 protein_coding protein_coding MGP_WSBEiJ_T0026346.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112155795 112198548 + MGP_WSBEiJ_P0026346 E2f7 protein_coding protein_coding MGP_WSBEiJ_T0026347.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112155854 112165389 + MGP_WSBEiJ_P0026347 E2f7 protein_coding protein_coding MGP_WSBEiJ_T0026348.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112165073 112167059 + E2f7 protein_coding processed_transcript MGP_WSBEiJ_T0026349.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112165143 112185445 + MGP_WSBEiJ_P0026349 E2f7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026350.1 MGP_WSBEiJ_G0017103.1 mouse_genomes_project 10 112174648 112176547 + E2f7 protein_coding retained_intron MGP_WSBEiJ_T0006016.1 MGP_WSBEiJ_G0005033.1 mouse_genomes_project 10 65693498 65694443 + Gm28139 lincRNA lincRNA MGP_WSBEiJ_T0096904.1 MGP_WSBEiJ_G0035585.1 mouse_genomes_project 10 107019205 107019316 - n-R5s80 rRNA rRNA MGP_WSBEiJ_T0000804.1 MGP_WSBEiJ_G0000743.1 mouse_genomes_project 10 119916755 119917105 + TEC TEC MGP_WSBEiJ_T0006002.1 MGP_WSBEiJ_G0005023.1 mouse_genomes_project 10 41222845 41224885 - Gm26860 lincRNA lincRNA MGP_WSBEiJ_T0024488.1 MGP_WSBEiJ_G0016626.1 mouse_genomes_project 10 52062862 52167167 - MGP_WSBEiJ_P0024488 Cep85l protein_coding protein_coding MGP_WSBEiJ_T0097653.1 MGP_WSBEiJ_G0036316.1 mouse_genomes_project 10 90280470 90280577 - Gm26180 snRNA snRNA MGP_WSBEiJ_T0024313.1 MGP_WSBEiJ_G0016569.1 mouse_genomes_project 10 39224370 39280662 - MGP_WSBEiJ_P0024313 Cdc40 protein_coding protein_coding MGP_WSBEiJ_T0023987.1 MGP_WSBEiJ_G0016443.1 mouse_genomes_project 10 15766175 15907813 + MGP_WSBEiJ_P0023987 Nhsl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023988.1 MGP_WSBEiJ_G0016443.1 mouse_genomes_project 10 15783510 15798666 + Nhsl1 protein_coding processed_transcript MGP_WSBEiJ_T0023989.1 MGP_WSBEiJ_G0016443.1 mouse_genomes_project 10 15783547 15896031 + Nhsl1 protein_coding retained_intron MGP_WSBEiJ_T0023990.1 MGP_WSBEiJ_G0016443.1 mouse_genomes_project 10 15783547 15917413 + MGP_WSBEiJ_P0023990 Nhsl1 protein_coding protein_coding MGP_WSBEiJ_T0023991.1 MGP_WSBEiJ_G0016443.1 mouse_genomes_project 10 15850712 15854264 + Nhsl1 protein_coding retained_intron MGP_WSBEiJ_T0023992.1 MGP_WSBEiJ_G0016443.1 mouse_genomes_project 10 15850792 15881620 + Nhsl1 protein_coding processed_transcript MGP_WSBEiJ_T0023993.1 MGP_WSBEiJ_G0016443.1 mouse_genomes_project 10 15850805 15909483 + MGP_WSBEiJ_P0023993 Nhsl1 protein_coding protein_coding MGP_WSBEiJ_T0023994.1 MGP_WSBEiJ_G0016443.1 mouse_genomes_project 10 15850805 15917410 + MGP_WSBEiJ_P0023994 Nhsl1 protein_coding protein_coding MGP_WSBEiJ_T0097610.1 MGP_WSBEiJ_G0036273.1 mouse_genomes_project 10 2390912 2391020 + Gm23573 snRNA snRNA MGP_WSBEiJ_T0100457.1 MGP_WSBEiJ_G0038916.1 mouse_genomes_project 10 132116534 132117428 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0024561.1 MGP_WSBEiJ_G0016651.1 mouse_genomes_project 10 57956832 58007069 + MGP_WSBEiJ_P0024561 P4ha1 protein_coding protein_coding MGP_WSBEiJ_T0024562.1 MGP_WSBEiJ_G0016651.1 mouse_genomes_project 10 57956900 58005727 + MGP_WSBEiJ_P0024562 P4ha1 protein_coding protein_coding MGP_WSBEiJ_T0024563.1 MGP_WSBEiJ_G0016651.1 mouse_genomes_project 10 57956904 58006022 + MGP_WSBEiJ_P0024563 P4ha1 protein_coding protein_coding MGP_WSBEiJ_T0026308.1 MGP_WSBEiJ_G0017090.1 mouse_genomes_project 10 106971760 107056555 - MGP_WSBEiJ_P0026308 Mettl25 protein_coding protein_coding MGP_WSBEiJ_T0026309.1 MGP_WSBEiJ_G0017090.1 mouse_genomes_project 10 106971826 107056557 - MGP_WSBEiJ_P0026309 Mettl25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026310.1 MGP_WSBEiJ_G0017090.1 mouse_genomes_project 10 107041739 107056548 - MGP_WSBEiJ_P0026310 Mettl25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026311.1 MGP_WSBEiJ_G0017090.1 mouse_genomes_project 10 107054367 107056388 - Mettl25 protein_coding processed_transcript MGP_WSBEiJ_T0026382.1 MGP_WSBEiJ_G0017119.1 mouse_genomes_project 10 116727314 116842779 - MGP_WSBEiJ_P0026382 Tph2 protein_coding protein_coding MGP_WSBEiJ_T0026383.1 MGP_WSBEiJ_G0017119.1 mouse_genomes_project 10 116830781 116833309 - Tph2 protein_coding processed_transcript MGP_WSBEiJ_T0024564.1 MGP_WSBEiJ_G0016652.1 mouse_genomes_project 10 58033538 58054145 + MGP_WSBEiJ_P0024564 Pla2g12b protein_coding protein_coding MGP_WSBEiJ_T0024565.1 MGP_WSBEiJ_G0016652.1 mouse_genomes_project 10 58043054 58054139 + MGP_WSBEiJ_P0024565 Pla2g12b protein_coding protein_coding MGP_WSBEiJ_T0012183.1 MGP_WSBEiJ_G0010313.1 mouse_genomes_project 10 75549721 75549995 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097660.1 MGP_WSBEiJ_G0036323.1 mouse_genomes_project 10 106212783 106212949 + Gm25587 snRNA snRNA MGP_WSBEiJ_T0005986.1 MGP_WSBEiJ_G0005010.1 mouse_genomes_project 10 14242217 14388578 - Gm20125 lincRNA lincRNA MGP_WSBEiJ_T0006065.1 MGP_WSBEiJ_G0005064.1 mouse_genomes_project 10 118448629 118453316 + Gm26579 lincRNA lincRNA MGP_WSBEiJ_T0026566.1 MGP_WSBEiJ_G0017180.1 mouse_genomes_project 10 129182176 129215051 - MGP_WSBEiJ_P0026566 Xrcc6bp1 protein_coding protein_coding MGP_WSBEiJ_T0026567.1 MGP_WSBEiJ_G0017180.1 mouse_genomes_project 10 129200011 129215051 - MGP_WSBEiJ_P0026567 Xrcc6bp1 protein_coding protein_coding MGP_WSBEiJ_T0026859.1 MGP_WSBEiJ_G0017287.1 mouse_genomes_project 10 131977850 131978751 + MGP_WSBEiJ_P0026859 Olfr805 protein_coding protein_coding MGP_WSBEiJ_T0026860.1 MGP_WSBEiJ_G0017287.1 mouse_genomes_project 10 131977853 131978751 + MGP_WSBEiJ_P0026860 Olfr805 protein_coding protein_coding MGP_WSBEiJ_T0026625.1 MGP_WSBEiJ_G0017201.1 mouse_genomes_project 10 129652515 129670900 - MGP_WSBEiJ_P0026625 Mars protein_coding protein_coding MGP_WSBEiJ_T0026626.1 MGP_WSBEiJ_G0017201.1 mouse_genomes_project 10 129652516 129670900 - MGP_WSBEiJ_P0026626 Mars protein_coding protein_coding MGP_WSBEiJ_T0026627.1 MGP_WSBEiJ_G0017201.1 mouse_genomes_project 10 129652520 129670792 - Mars protein_coding retained_intron MGP_WSBEiJ_T0026628.1 MGP_WSBEiJ_G0017201.1 mouse_genomes_project 10 129652520 129654758 - MGP_WSBEiJ_P0026628 Mars protein_coding protein_coding MGP_WSBEiJ_T0026629.1 MGP_WSBEiJ_G0017201.1 mouse_genomes_project 10 129652643 129654669 - Mars protein_coding retained_intron MGP_WSBEiJ_T0026630.1 MGP_WSBEiJ_G0017201.1 mouse_genomes_project 10 129667149 129668087 - Mars protein_coding retained_intron MGP_WSBEiJ_T0023821.1 MGP_WSBEiJ_G0016403.1 mouse_genomes_project 10 4751805 4790029 + MGP_WSBEiJ_P0023821 Katna1 protein_coding protein_coding MGP_WSBEiJ_T0023822.1 MGP_WSBEiJ_G0016403.1 mouse_genomes_project 10 4751805 4790030 + MGP_WSBEiJ_P0023822 Katna1 protein_coding protein_coding MGP_WSBEiJ_T0023823.1 MGP_WSBEiJ_G0016403.1 mouse_genomes_project 10 4751813 4779046 + MGP_WSBEiJ_P0023823 Katna1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023824.1 MGP_WSBEiJ_G0016403.1 mouse_genomes_project 10 4775132 4787118 + Katna1 protein_coding retained_intron MGP_WSBEiJ_T0023825.1 MGP_WSBEiJ_G0016403.1 mouse_genomes_project 10 4786656 4789944 + MGP_WSBEiJ_P0023825 Katna1 protein_coding protein_coding MGP_WSBEiJ_T0023826.1 MGP_WSBEiJ_G0016403.1 mouse_genomes_project 10 4788113 4790028 + MGP_WSBEiJ_P0023826 Katna1 protein_coding protein_coding MGP_WSBEiJ_T0024088.1 MGP_WSBEiJ_G0016476.1 mouse_genomes_project 10 21390284 21394111 - MGP_WSBEiJ_P0024088 Rps12 protein_coding protein_coding MGP_WSBEiJ_T0009475.1 MGP_WSBEiJ_G0007632.1 mouse_genomes_project 10 102792923 102793004 + Mir3059 miRNA miRNA MGP_WSBEiJ_T0024143.1 MGP_WSBEiJ_G0016501.1 mouse_genomes_project 10 23240993 23249511 - MGP_WSBEiJ_P0024143 Smlr1 protein_coding protein_coding MGP_WSBEiJ_T0024144.1 MGP_WSBEiJ_G0016501.1 mouse_genomes_project 10 23245294 23249386 - Smlr1 protein_coding retained_intron MGP_WSBEiJ_T0026828.1 MGP_WSBEiJ_G0017271.1 mouse_genomes_project 10 131428206 131434409 - MGP_WSBEiJ_P0026828 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026829.1 MGP_WSBEiJ_G0017271.1 mouse_genomes_project 10 131428434 131432646 - MGP_WSBEiJ_P0026829 protein_coding protein_coding MGP_WSBEiJ_T0026830.1 MGP_WSBEiJ_G0017271.1 mouse_genomes_project 10 131428463 131429242 - protein_coding retained_intron MGP_WSBEiJ_T0026831.1 MGP_WSBEiJ_G0017271.1 mouse_genomes_project 10 131428842 131433867 - MGP_WSBEiJ_P0026831 protein_coding protein_coding MGP_WSBEiJ_T0026832.1 MGP_WSBEiJ_G0017271.1 mouse_genomes_project 10 131431891 131433892 - protein_coding retained_intron MGP_WSBEiJ_T0026834.1 MGP_WSBEiJ_G0017271.1 mouse_genomes_project 10 131432517 131433299 - MGP_WSBEiJ_P0026834 protein_coding protein_coding MGP_WSBEiJ_T0026835.1 MGP_WSBEiJ_G0017271.1 mouse_genomes_project 10 131433013 131437483 - MGP_WSBEiJ_P0026835 protein_coding protein_coding MGP_WSBEiJ_T0026293.1 MGP_WSBEiJ_G0017086.1 mouse_genomes_project 10 104135878 104157368 - MGP_WSBEiJ_P0026293 Alx1 protein_coding protein_coding MGP_WSBEiJ_T0026294.1 MGP_WSBEiJ_G0017086.1 mouse_genomes_project 10 104135879 104157105 - MGP_WSBEiJ_P0026294 Alx1 protein_coding protein_coding MGP_WSBEiJ_T0026295.1 MGP_WSBEiJ_G0017086.1 mouse_genomes_project 10 104136183 104150564 - Alx1 protein_coding processed_transcript MGP_WSBEiJ_T0002977.1 MGP_WSBEiJ_G0002789.1 mouse_genomes_project 10 75578156 75579449 - Gm16220 antisense antisense MGP_WSBEiJ_T0026044.1 MGP_WSBEiJ_G0017019.1 mouse_genomes_project 10 89031780 89045006 - MGP_WSBEiJ_P0026044 Spic protein_coding protein_coding MGP_WSBEiJ_T0026045.1 MGP_WSBEiJ_G0017019.1 mouse_genomes_project 10 89037349 89045006 - MGP_WSBEiJ_P0026045 Spic protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026046.1 MGP_WSBEiJ_G0017019.1 mouse_genomes_project 10 89037972 89046833 - MGP_WSBEiJ_P0026046 Spic protein_coding protein_coding MGP_WSBEiJ_T0026047.1 MGP_WSBEiJ_G0017019.1 mouse_genomes_project 10 89039872 89045006 - Spic protein_coding retained_intron MGP_WSBEiJ_T0005988.1 MGP_WSBEiJ_G0005012.1 mouse_genomes_project 10 18898811 18906011 + 1700021A07Rik lincRNA lincRNA MGP_WSBEiJ_T0005989.1 MGP_WSBEiJ_G0005012.1 mouse_genomes_project 10 18898930 18905192 + 1700021A07Rik lincRNA lincRNA MGP_WSBEiJ_T0005990.1 MGP_WSBEiJ_G0005012.1 mouse_genomes_project 10 18904787 18905096 + 1700021A07Rik lincRNA lincRNA MGP_WSBEiJ_T0026365.1 MGP_WSBEiJ_G0017111.1 mouse_genomes_project 10 113461158 113472989 - MGP_WSBEiJ_P0026365 Glipr1 protein_coding protein_coding MGP_WSBEiJ_T0026366.1 MGP_WSBEiJ_G0017111.1 mouse_genomes_project 10 113461165 113478165 - MGP_WSBEiJ_P0026366 Glipr1 protein_coding protein_coding MGP_WSBEiJ_T0026367.1 MGP_WSBEiJ_G0017111.1 mouse_genomes_project 10 113461170 113469205 - MGP_WSBEiJ_P0026367 Glipr1 protein_coding protein_coding MGP_WSBEiJ_T0026368.1 MGP_WSBEiJ_G0017111.1 mouse_genomes_project 10 113469177 113478175 - Glipr1 protein_coding processed_transcript MGP_WSBEiJ_T0026369.1 MGP_WSBEiJ_G0017111.1 mouse_genomes_project 10 113469277 113471524 - Glipr1 protein_coding processed_transcript MGP_WSBEiJ_T0023966.1 MGP_WSBEiJ_G0016436.1 mouse_genomes_project 10 15054466 15056912 + MGP_WSBEiJ_P0023966 Cited2 protein_coding protein_coding MGP_WSBEiJ_T0025783.1 MGP_WSBEiJ_G0016954.1 mouse_genomes_project 10 81573031 81589445 - MGP_WSBEiJ_P0025783 Gna11 protein_coding protein_coding MGP_WSBEiJ_T0025784.1 MGP_WSBEiJ_G0016954.1 mouse_genomes_project 10 81574594 81576307 - Gna11 protein_coding retained_intron MGP_WSBEiJ_T0025785.1 MGP_WSBEiJ_G0016954.1 mouse_genomes_project 10 81577401 81579402 - Gna11 protein_coding retained_intron MGP_WSBEiJ_T0098845.1 MGP_WSBEiJ_G0037508.1 mouse_genomes_project 10 36430142 36430273 + Gm24889 snoRNA snoRNA MGP_WSBEiJ_T0026050.1 MGP_WSBEiJ_G0017021.1 mouse_genomes_project 10 89128877 89210412 - MGP_WSBEiJ_P0026050 Utp20 protein_coding protein_coding MGP_WSBEiJ_T0024860.1 MGP_WSBEiJ_G0016728.1 mouse_genomes_project 10 68408727 68413175 - MGP_WSBEiJ_P0024860 A930033H14Rik protein_coding protein_coding MGP_WSBEiJ_T0097640.1 MGP_WSBEiJ_G0036303.1 mouse_genomes_project 10 65225795 65225901 - Gm22829 snRNA snRNA MGP_WSBEiJ_T0003037.1 MGP_WSBEiJ_G0002833.1 mouse_genomes_project 10 130857540 130861263 - Gm17201 antisense antisense MGP_WSBEiJ_T0024841.1 MGP_WSBEiJ_G0016720.1 mouse_genomes_project 10 66657245 66661696 - MGP_WSBEiJ_P0024841 Ado protein_coding protein_coding MGP_WSBEiJ_T0026561.1 MGP_WSBEiJ_G0017176.1 mouse_genomes_project 10 125267245 125351614 - MGP_WSBEiJ_P0026561 Usp15 protein_coding protein_coding MGP_WSBEiJ_T0024464.1 MGP_WSBEiJ_G0016614.1 mouse_genomes_project 10 50306917 50313975 - MGP_WSBEiJ_P0024464 Fam162b protein_coding protein_coding MGP_WSBEiJ_T0097663.1 MGP_WSBEiJ_G0036326.1 mouse_genomes_project 10 112549106 112549209 - Gm22101 snRNA snRNA MGP_WSBEiJ_T0097669.1 MGP_WSBEiJ_G0036332.1 mouse_genomes_project 10 130759167 130759273 - Gm23241 snRNA snRNA MGP_WSBEiJ_T0024510.1 MGP_WSBEiJ_G0016635.1 mouse_genomes_project 10 55597447 55600565 + MGP_WSBEiJ_P0024510 Gm9956 protein_coding protein_coding MGP_WSBEiJ_T0026752.1 MGP_WSBEiJ_G0017236.1 mouse_genomes_project 10 130708409 130710180 + MGP_WSBEiJ_P0026752 Apon protein_coding protein_coding MGP_WSBEiJ_T0098877.1 MGP_WSBEiJ_G0037540.1 mouse_genomes_project 10 112297129 112297251 - Gm22186 snoRNA snoRNA MGP_WSBEiJ_T0024221.1 MGP_WSBEiJ_G0016533.1 mouse_genomes_project 10 32003828 32003894 - MGP_WSBEiJ_P0024221 Gm17567 protein_coding protein_coding MGP_WSBEiJ_T0024953.1 MGP_WSBEiJ_G0016740.1 mouse_genomes_project 10 70692088 70733305 + MGP_WSBEiJ_P0024953 Ipmk protein_coding protein_coding MGP_WSBEiJ_T0024954.1 MGP_WSBEiJ_G0016740.1 mouse_genomes_project 10 70692161 70729419 + MGP_WSBEiJ_P0024954 Ipmk protein_coding protein_coding MGP_WSBEiJ_T0024955.1 MGP_WSBEiJ_G0016740.1 mouse_genomes_project 10 70692161 70729658 + MGP_WSBEiJ_P0024955 Ipmk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024956.1 MGP_WSBEiJ_G0016740.1 mouse_genomes_project 10 70692161 70724861 + MGP_WSBEiJ_P0024956 Ipmk protein_coding protein_coding MGP_WSBEiJ_T0024957.1 MGP_WSBEiJ_G0016740.1 mouse_genomes_project 10 70692168 70711340 + Ipmk protein_coding retained_intron MGP_WSBEiJ_T0024958.1 MGP_WSBEiJ_G0016740.1 mouse_genomes_project 10 70729167 70783108 + MGP_WSBEiJ_P0024958 Ipmk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024959.1 MGP_WSBEiJ_G0016740.1 mouse_genomes_project 10 70757344 70783255 + Ipmk protein_coding processed_transcript MGP_WSBEiJ_T0098861.1 MGP_WSBEiJ_G0037524.1 mouse_genomes_project 10 71274444 71274575 + Gm22937 snoRNA snoRNA MGP_WSBEiJ_T0024316.1 MGP_WSBEiJ_G0016571.1 mouse_genomes_project 10 39476169 39478466 - MGP_WSBEiJ_P0024316 Gpr6 protein_coding protein_coding MGP_WSBEiJ_T0025722.1 MGP_WSBEiJ_G0016941.1 mouse_genomes_project 10 81342823 81351435 + MGP_WSBEiJ_P0025722 Tbxa2r protein_coding protein_coding MGP_WSBEiJ_T0009448.1 MGP_WSBEiJ_G0007605.1 mouse_genomes_project 10 78215894 78215998 + Mir6410 miRNA miRNA MGP_WSBEiJ_T0002961.1 MGP_WSBEiJ_G0002776.1 mouse_genomes_project 10 41665638 41665931 + antisense antisense MGP_WSBEiJ_T0097670.1 MGP_WSBEiJ_G0036333.1 mouse_genomes_project 10 131460641 131460741 + Gm25494 snRNA snRNA MGP_WSBEiJ_T0009493.1 MGP_WSBEiJ_G0007650.1 mouse_genomes_project 10 130848541 130848610 + Mir6914 miRNA miRNA MGP_WSBEiJ_T0024800.1 MGP_WSBEiJ_G0016710.1 mouse_genomes_project 10 62197005 62283974 + MGP_WSBEiJ_P0024800 Herc4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024801.1 MGP_WSBEiJ_G0016710.1 mouse_genomes_project 10 62197039 62283985 + MGP_WSBEiJ_P0024801 Herc4 protein_coding protein_coding MGP_WSBEiJ_T0026257.1 MGP_WSBEiJ_G0017077.1 mouse_genomes_project 10 100642371 100644317 - MGP_WSBEiJ_P0026257 Csl protein_coding protein_coding MGP_WSBEiJ_T0023732.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1629087 1916953 + Esr1 protein_coding processed_transcript MGP_WSBEiJ_T0023733.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1629477 2023133 + MGP_WSBEiJ_P0023733 Esr1 protein_coding protein_coding MGP_WSBEiJ_T0023734.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1629484 1695463 + Esr1 protein_coding retained_intron MGP_WSBEiJ_T0023735.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1629501 1875100 + Esr1 protein_coding retained_intron MGP_WSBEiJ_T0023736.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1629509 2021280 + MGP_WSBEiJ_P0023736 Esr1 protein_coding protein_coding MGP_WSBEiJ_T0023737.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1735661 2019543 + MGP_WSBEiJ_P0023737 Esr1 protein_coding protein_coding MGP_WSBEiJ_T0023738.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1735661 1982395 + MGP_WSBEiJ_P0023738 Esr1 protein_coding protein_coding MGP_WSBEiJ_T0023739.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1738157 1807797 + Esr1 protein_coding processed_transcript MGP_WSBEiJ_T0023740.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1934387 2015451 + Esr1 protein_coding processed_transcript MGP_WSBEiJ_T0023741.1 MGP_WSBEiJ_G0016385.1 mouse_genomes_project 10 1952109 2019175 + Esr1 protein_coding processed_transcript MGP_WSBEiJ_T0025848.1 MGP_WSBEiJ_G0016966.1 mouse_genomes_project 10 82498750 82501001 + MGP_WSBEiJ_P0025848 protein_coding protein_coding MGP_WSBEiJ_T0024945.1 MGP_WSBEiJ_G0016737.1 mouse_genomes_project 10 70558798 70571673 - MGP_WSBEiJ_P0024945 Tfam protein_coding protein_coding MGP_WSBEiJ_T0024946.1 MGP_WSBEiJ_G0016737.1 mouse_genomes_project 10 70561791 70568932 - Tfam protein_coding processed_transcript MGP_WSBEiJ_T0024947.1 MGP_WSBEiJ_G0016737.1 mouse_genomes_project 10 70561802 70572013 - MGP_WSBEiJ_P0024947 Tfam protein_coding protein_coding MGP_WSBEiJ_T0024948.1 MGP_WSBEiJ_G0016737.1 mouse_genomes_project 10 70562461 70570776 - MGP_WSBEiJ_P0024948 Tfam protein_coding protein_coding MGP_WSBEiJ_T0025944.1 MGP_WSBEiJ_G0016995.1 mouse_genomes_project 10 86172234 86191053 - MGP_WSBEiJ_P0025944 Rtcb protein_coding protein_coding MGP_WSBEiJ_T0025945.1 MGP_WSBEiJ_G0016995.1 mouse_genomes_project 10 86182452 86189365 - Rtcb protein_coding retained_intron MGP_WSBEiJ_T0012179.1 MGP_WSBEiJ_G0010309.1 mouse_genomes_project 10 73160265 73160814 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012165.1 MGP_WSBEiJ_G0010295.1 mouse_genomes_project 10 42343117 42344122 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009472.1 MGP_WSBEiJ_G0007629.1 mouse_genomes_project 10 96268251 96268342 - Mir3058 miRNA miRNA MGP_WSBEiJ_T0000786.1 MGP_WSBEiJ_G0000726.1 mouse_genomes_project 10 35334471 35334818 + TEC TEC MGP_WSBEiJ_T0024441.1 MGP_WSBEiJ_G0016606.1 mouse_genomes_project 10 43908708 43946154 + MGP_WSBEiJ_P0024441 Bves protein_coding protein_coding MGP_WSBEiJ_T0098863.1 MGP_WSBEiJ_G0037526.1 mouse_genomes_project 10 77644717 77644793 - Gm22394 snoRNA snoRNA MGP_WSBEiJ_T0025214.1 MGP_WSBEiJ_G0016797.1 mouse_genomes_project 10 77408782 77409335 + MGP_WSBEiJ_P0025214 Gm10024 protein_coding protein_coding MGP_WSBEiJ_T0026269.1 MGP_WSBEiJ_G0017081.1 mouse_genomes_project 10 101506521 101518648 - MGP_WSBEiJ_P0026269 4930430F08Rik protein_coding protein_coding MGP_WSBEiJ_T0024602.1 MGP_WSBEiJ_G0016661.1 mouse_genomes_project 10 58792147 58827664 + MGP_WSBEiJ_P0024602 Spock2 protein_coding protein_coding MGP_WSBEiJ_T0024603.1 MGP_WSBEiJ_G0016661.1 mouse_genomes_project 10 58792148 58818364 + Spock2 protein_coding retained_intron MGP_WSBEiJ_T0024604.1 MGP_WSBEiJ_G0016661.1 mouse_genomes_project 10 58792397 58826374 + MGP_WSBEiJ_P0024604 Spock2 protein_coding protein_coding MGP_WSBEiJ_T0026359.1 MGP_WSBEiJ_G0017109.1 mouse_genomes_project 10 112949960 112952323 + MGP_WSBEiJ_P0026359 Phlda1 protein_coding protein_coding MGP_WSBEiJ_T0026360.1 MGP_WSBEiJ_G0017109.1 mouse_genomes_project 10 112951370 112951840 + Phlda1 protein_coding processed_transcript MGP_WSBEiJ_T0097658.1 MGP_WSBEiJ_G0036321.1 mouse_genomes_project 10 105685114 105685271 - Gm22945 snRNA snRNA MGP_WSBEiJ_T0009486.1 MGP_WSBEiJ_G0007643.1 mouse_genomes_project 10 125351554 125351650 - Gm27920 miRNA miRNA MGP_WSBEiJ_T0024198.1 MGP_WSBEiJ_G0016521.1 mouse_genomes_project 10 28694222 28704663 - MGP_WSBEiJ_P0024198 Hey2 protein_coding protein_coding MGP_WSBEiJ_T0024460.1 MGP_WSBEiJ_G0016611.1 mouse_genomes_project 10 49601925 49693026 + MGP_WSBEiJ_P0024460 Sim1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024487.1 MGP_WSBEiJ_G0016625.1 mouse_genomes_project 10 51449301 51890668 + MGP_WSBEiJ_P0024487 Slc35f1 protein_coding protein_coding MGP_WSBEiJ_T0024239.1 MGP_WSBEiJ_G0016545.1 mouse_genomes_project 10 34683967 35026232 + MGP_WSBEiJ_P0024239 Hs3st5 protein_coding protein_coding MGP_WSBEiJ_T0024240.1 MGP_WSBEiJ_G0016545.1 mouse_genomes_project 10 34683972 35026848 + MGP_WSBEiJ_P0024240 Hs3st5 protein_coding protein_coding MGP_WSBEiJ_T0024241.1 MGP_WSBEiJ_G0016545.1 mouse_genomes_project 10 34684042 34899230 + Hs3st5 protein_coding retained_intron MGP_WSBEiJ_T0024242.1 MGP_WSBEiJ_G0016545.1 mouse_genomes_project 10 34684179 35026856 + MGP_WSBEiJ_P0024242 Hs3st5 protein_coding protein_coding MGP_WSBEiJ_T0024243.1 MGP_WSBEiJ_G0016545.1 mouse_genomes_project 10 34684560 35004750 + Hs3st5 protein_coding processed_transcript MGP_WSBEiJ_T0026379.1 MGP_WSBEiJ_G0017118.1 mouse_genomes_project 10 116034051 116448968 - MGP_WSBEiJ_P0026379 Trhde protein_coding protein_coding MGP_WSBEiJ_T0026380.1 MGP_WSBEiJ_G0017118.1 mouse_genomes_project 10 116195693 116449855 - Trhde protein_coding retained_intron MGP_WSBEiJ_T0026381.1 MGP_WSBEiJ_G0017118.1 mouse_genomes_project 10 116432869 116448915 - Trhde protein_coding retained_intron MGP_WSBEiJ_T0024642.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59868477 59919926 - MGP_WSBEiJ_P0024642 Sgpl1 protein_coding protein_coding MGP_WSBEiJ_T0024643.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59868477 59919896 - MGP_WSBEiJ_P0024643 Sgpl1 protein_coding protein_coding MGP_WSBEiJ_T0024644.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59868480 59919896 - MGP_WSBEiJ_P0024644 Sgpl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024645.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59870662 59872973 - Sgpl1 protein_coding retained_intron MGP_WSBEiJ_T0024646.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59874041 59875324 - Sgpl1 protein_coding retained_intron MGP_WSBEiJ_T0024647.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59884255 59919955 - MGP_WSBEiJ_P0024647 Sgpl1 protein_coding protein_coding MGP_WSBEiJ_T0024648.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59886173 59919928 - MGP_WSBEiJ_P0024648 Sgpl1 protein_coding protein_coding MGP_WSBEiJ_T0024649.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59889548 59919904 - Sgpl1 protein_coding processed_transcript MGP_WSBEiJ_T0024650.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59895577 59919142 - MGP_WSBEiJ_P0024650 Sgpl1 protein_coding protein_coding MGP_WSBEiJ_T0024651.1 MGP_WSBEiJ_G0016670.1 mouse_genomes_project 10 59918029 59919856 - Sgpl1 protein_coding retained_intron MGP_WSBEiJ_T0025409.1 MGP_WSBEiJ_G0016859.1 mouse_genomes_project 10 79792185 79800241 - MGP_WSBEiJ_P0025409 R3hdm4 protein_coding protein_coding MGP_WSBEiJ_T0025401.1 MGP_WSBEiJ_G0016857.1 mouse_genomes_project 10 79770497 79772301 + MGP_WSBEiJ_P0025401 Cfd protein_coding protein_coding MGP_WSBEiJ_T0003006.1 MGP_WSBEiJ_G0002812.1 mouse_genomes_project 10 87253092 87311883 + Gm16271 antisense antisense MGP_WSBEiJ_T0025884.1 MGP_WSBEiJ_G0016977.1 mouse_genomes_project 10 83650938 83698963 - MGP_WSBEiJ_P0025884 Aldh1l2 protein_coding protein_coding MGP_WSBEiJ_T0025885.1 MGP_WSBEiJ_G0016977.1 mouse_genomes_project 10 83653696 83656377 - Aldh1l2 protein_coding processed_transcript MGP_WSBEiJ_T0025886.1 MGP_WSBEiJ_G0016977.1 mouse_genomes_project 10 83655099 83657861 - Aldh1l2 protein_coding processed_transcript MGP_WSBEiJ_T0025887.1 MGP_WSBEiJ_G0016977.1 mouse_genomes_project 10 83655101 83699030 - Aldh1l2 protein_coding retained_intron MGP_WSBEiJ_T0025888.1 MGP_WSBEiJ_G0016977.1 mouse_genomes_project 10 83660194 83671654 - Aldh1l2 protein_coding processed_transcript MGP_WSBEiJ_T0025889.1 MGP_WSBEiJ_G0016977.1 mouse_genomes_project 10 83666880 83677252 - Aldh1l2 protein_coding processed_transcript MGP_WSBEiJ_T0026320.1 MGP_WSBEiJ_G0017094.1 mouse_genomes_project 10 108525107 108683178 + MGP_WSBEiJ_P0026320 Lin7a protein_coding protein_coding MGP_WSBEiJ_T0026321.1 MGP_WSBEiJ_G0017094.1 mouse_genomes_project 10 108525107 108683178 + MGP_WSBEiJ_P0026321 Lin7a protein_coding protein_coding MGP_WSBEiJ_T0098887.1 MGP_WSBEiJ_G0037550.1 mouse_genomes_project 10 131898283 131898417 + Gm25764 snoRNA snoRNA MGP_WSBEiJ_T0003035.1 MGP_WSBEiJ_G0002831.1 mouse_genomes_project 10 130051063 130052709 + Gm16229 antisense antisense MGP_WSBEiJ_T0025098.1 MGP_WSBEiJ_G0016767.1 mouse_genomes_project 10 75510531 75512684 + MGP_WSBEiJ_P0025098 Chchd10 protein_coding protein_coding MGP_WSBEiJ_T0025105.1 MGP_WSBEiJ_G0016772.1 mouse_genomes_project 10 75816241 75847883 - MGP_WSBEiJ_P0025105 Prmt2 protein_coding protein_coding MGP_WSBEiJ_T0025106.1 MGP_WSBEiJ_G0016772.1 mouse_genomes_project 10 75816246 75847855 - MGP_WSBEiJ_P0025106 Prmt2 protein_coding protein_coding MGP_WSBEiJ_T0025107.1 MGP_WSBEiJ_G0016772.1 mouse_genomes_project 10 75816251 75847848 - MGP_WSBEiJ_P0025107 Prmt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025108.1 MGP_WSBEiJ_G0016772.1 mouse_genomes_project 10 75816251 75847854 - MGP_WSBEiJ_P0025108 Prmt2 protein_coding protein_coding MGP_WSBEiJ_T0025109.1 MGP_WSBEiJ_G0016772.1 mouse_genomes_project 10 75816995 75847875 - MGP_WSBEiJ_P0025109 Prmt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025110.1 MGP_WSBEiJ_G0016772.1 mouse_genomes_project 10 75817437 75820976 - Prmt2 protein_coding retained_intron MGP_WSBEiJ_T0025111.1 MGP_WSBEiJ_G0016772.1 mouse_genomes_project 10 75817463 75821739 - Prmt2 protein_coding processed_transcript MGP_WSBEiJ_T0023694.1 MGP_WSBEiJ_G0016376.1 mouse_genomes_project 10 297121 403098 + MGP_WSBEiJ_P0023694 Ppp1r14c protein_coding protein_coding MGP_WSBEiJ_T0024923.1 MGP_WSBEiJ_G0016731.1 mouse_genomes_project 10 69350977 69454318 + MGP_WSBEiJ_P0024923 Ccdc6 protein_coding protein_coding MGP_WSBEiJ_T0024924.1 MGP_WSBEiJ_G0016731.1 mouse_genomes_project 10 69434200 69443054 + Ccdc6 protein_coding retained_intron MGP_WSBEiJ_T0024925.1 MGP_WSBEiJ_G0016731.1 mouse_genomes_project 10 69434702 69449244 + MGP_WSBEiJ_P0024925 Ccdc6 protein_coding protein_coding MGP_WSBEiJ_T0024926.1 MGP_WSBEiJ_G0016731.1 mouse_genomes_project 10 69434738 69449258 + MGP_WSBEiJ_P0024926 Ccdc6 protein_coding protein_coding MGP_WSBEiJ_T0025209.1 MGP_WSBEiJ_G0016795.1 mouse_genomes_project 10 77311071 77332778 + MGP_WSBEiJ_P0025209 Ube2g2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025210.1 MGP_WSBEiJ_G0016795.1 mouse_genomes_project 10 77311122 77334216 + MGP_WSBEiJ_P0025210 Ube2g2 protein_coding protein_coding MGP_WSBEiJ_T0025211.1 MGP_WSBEiJ_G0016795.1 mouse_genomes_project 10 77311126 77329721 + MGP_WSBEiJ_P0025211 Ube2g2 protein_coding protein_coding MGP_WSBEiJ_T0025212.1 MGP_WSBEiJ_G0016795.1 mouse_genomes_project 10 77329406 77332727 + Ube2g2 protein_coding retained_intron MGP_WSBEiJ_T0026905.1 MGP_WSBEiJ_G0017321.1 mouse_genomes_project 10 133070203 133107658 - MGP_WSBEiJ_P0026905 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0097611.1 MGP_WSBEiJ_G0036274.1 mouse_genomes_project 10 5690990 5691096 + Gm24374 snRNA snRNA MGP_WSBEiJ_T0025099.1 MGP_WSBEiJ_G0016768.1 mouse_genomes_project 10 75518846 75526444 + MGP_WSBEiJ_P0025099 Vpreb3 protein_coding protein_coding MGP_WSBEiJ_T0025100.1 MGP_WSBEiJ_G0016768.1 mouse_genomes_project 10 75525106 75526464 + MGP_WSBEiJ_P0025100 Vpreb3 protein_coding protein_coding MGP_WSBEiJ_T0026077.1 MGP_WSBEiJ_G0017028.1 mouse_genomes_project 10 90169674 90189720 - MGP_WSBEiJ_P0026077 Actr6 protein_coding protein_coding MGP_WSBEiJ_T0025619.1 MGP_WSBEiJ_G0016909.1 mouse_genomes_project 10 80771875 80778601 + MGP_WSBEiJ_P0025619 Sf3a2 protein_coding protein_coding MGP_WSBEiJ_T0025620.1 MGP_WSBEiJ_G0016909.1 mouse_genomes_project 10 80772409 80777684 + MGP_WSBEiJ_P0025620 Sf3a2 protein_coding protein_coding MGP_WSBEiJ_T0025621.1 MGP_WSBEiJ_G0016909.1 mouse_genomes_project 10 80772646 80776080 + MGP_WSBEiJ_P0025621 Sf3a2 protein_coding protein_coding MGP_WSBEiJ_T0025622.1 MGP_WSBEiJ_G0016909.1 mouse_genomes_project 10 80776178 80777694 + Sf3a2 protein_coding retained_intron MGP_WSBEiJ_T0024732.1 MGP_WSBEiJ_G0016693.1 mouse_genomes_project 10 61302883 61323391 - MGP_WSBEiJ_P0024732 Supv3l1 protein_coding protein_coding MGP_WSBEiJ_T0024733.1 MGP_WSBEiJ_G0016693.1 mouse_genomes_project 10 61302929 61323336 - MGP_WSBEiJ_P0024733 Supv3l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024734.1 MGP_WSBEiJ_G0016693.1 mouse_genomes_project 10 61303014 61304296 - Supv3l1 protein_coding retained_intron MGP_WSBEiJ_T0024735.1 MGP_WSBEiJ_G0016693.1 mouse_genomes_project 10 61303117 61304643 - Supv3l1 protein_coding retained_intron MGP_WSBEiJ_T0024736.1 MGP_WSBEiJ_G0016693.1 mouse_genomes_project 10 61306033 61306802 - Supv3l1 protein_coding processed_transcript MGP_WSBEiJ_T0098834.1 MGP_WSBEiJ_G0037497.1 mouse_genomes_project 10 11450748 11450859 + Gm24343 snoRNA snoRNA MGP_WSBEiJ_T0024761.1 MGP_WSBEiJ_G0016702.1 mouse_genomes_project 10 61715829 61802557 - MGP_WSBEiJ_P0024761 Tet1 protein_coding protein_coding MGP_WSBEiJ_T0024762.1 MGP_WSBEiJ_G0016702.1 mouse_genomes_project 10 61715836 61823461 - MGP_WSBEiJ_P0024762 Tet1 protein_coding protein_coding MGP_WSBEiJ_T0024763.1 MGP_WSBEiJ_G0016702.1 mouse_genomes_project 10 61725761 61787455 - MGP_WSBEiJ_P0024763 Tet1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024764.1 MGP_WSBEiJ_G0016702.1 mouse_genomes_project 10 61725851 61727770 - MGP_WSBEiJ_P0024764 Tet1 protein_coding protein_coding MGP_WSBEiJ_T0024765.1 MGP_WSBEiJ_G0016702.1 mouse_genomes_project 10 61726355 61727771 - MGP_WSBEiJ_P0024765 Tet1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024766.1 MGP_WSBEiJ_G0016702.1 mouse_genomes_project 10 61726577 61727769 - MGP_WSBEiJ_P0024766 Tet1 protein_coding protein_coding MGP_WSBEiJ_T0024767.1 MGP_WSBEiJ_G0016702.1 mouse_genomes_project 10 61755058 61787119 - Tet1 protein_coding processed_transcript MGP_WSBEiJ_T0023745.1 MGP_WSBEiJ_G0016388.1 mouse_genomes_project 10 2261834 2366830 - MGP_WSBEiJ_P0023745 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024737.1 MGP_WSBEiJ_G0016694.1 mouse_genomes_project 10 61323141 61324986 + MGP_WSBEiJ_P0024737 4930507D05Rik protein_coding protein_coding MGP_WSBEiJ_T0024641.1 MGP_WSBEiJ_G0016669.1 mouse_genomes_project 10 59858494 59863491 + MGP_WSBEiJ_P0024641 Pcbd1 protein_coding protein_coding MGP_WSBEiJ_T0024305.1 MGP_WSBEiJ_G0016563.1 mouse_genomes_project 10 38573500 38581873 - MGP_WSBEiJ_P0024305 Gtf3c6 protein_coding protein_coding MGP_WSBEiJ_T0009436.1 MGP_WSBEiJ_G0007593.1 mouse_genomes_project 10 58914088 58914159 - Gm22117 miRNA miRNA MGP_WSBEiJ_T0024306.1 MGP_WSBEiJ_G0016564.1 mouse_genomes_project 10 38617912 38637919 - MGP_WSBEiJ_P0024306 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024131.1 MGP_WSBEiJ_G0016498.1 mouse_genomes_project 10 22597546 22609077 - MGP_WSBEiJ_P0024131 Arg1 protein_coding protein_coding MGP_WSBEiJ_T0026069.1 MGP_WSBEiJ_G0017026.1 mouse_genomes_project 10 90027788 90076568 - MGP_WSBEiJ_P0026069 Slc17a8 protein_coding protein_coding MGP_WSBEiJ_T0012156.1 MGP_WSBEiJ_G0010286.1 mouse_genomes_project 10 24410371 24411383 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026866.1 MGP_WSBEiJ_G0017292.1 mouse_genomes_project 10 132040767 132041703 + MGP_WSBEiJ_P0026866 Olfr788 protein_coding protein_coding MGP_WSBEiJ_T0025676.1 MGP_WSBEiJ_G0016928.1 mouse_genomes_project 10 81147700 81162171 - MGP_WSBEiJ_P0025676 Pias4 protein_coding protein_coding MGP_WSBEiJ_T0025677.1 MGP_WSBEiJ_G0016928.1 mouse_genomes_project 10 81148669 81150560 - Pias4 protein_coding retained_intron MGP_WSBEiJ_T0025678.1 MGP_WSBEiJ_G0016928.1 mouse_genomes_project 10 81149937 81152447 - Pias4 protein_coding retained_intron MGP_WSBEiJ_T0025679.1 MGP_WSBEiJ_G0016928.1 mouse_genomes_project 10 81150107 81161969 - MGP_WSBEiJ_P0025679 Pias4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025680.1 MGP_WSBEiJ_G0016928.1 mouse_genomes_project 10 81150294 81151695 - MGP_WSBEiJ_P0025680 Pias4 protein_coding protein_coding MGP_WSBEiJ_T0025681.1 MGP_WSBEiJ_G0016928.1 mouse_genomes_project 10 81157295 81161962 - Pias4 protein_coding retained_intron MGP_WSBEiJ_T0016506.1 MGP_WSBEiJ_G0014550.1 mouse_genomes_project 10 35346913 35350896 + 5930403N24Rik processed_transcript retained_intron MGP_WSBEiJ_T0016507.1 MGP_WSBEiJ_G0014550.1 mouse_genomes_project 10 35347097 35349209 + 5930403N24Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016508.1 MGP_WSBEiJ_G0014550.1 mouse_genomes_project 10 35347453 35360381 + 5930403N24Rik processed_transcript lincRNA MGP_WSBEiJ_T0024810.1 MGP_WSBEiJ_G0016713.1 mouse_genomes_project 10 62409230 62825625 + MGP_WSBEiJ_P0024810 Ctnna3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024811.1 MGP_WSBEiJ_G0016713.1 mouse_genomes_project 10 62409488 64030035 + MGP_WSBEiJ_P0024811 Ctnna3 protein_coding protein_coding MGP_WSBEiJ_T0024812.1 MGP_WSBEiJ_G0016713.1 mouse_genomes_project 10 62435110 64030735 + MGP_WSBEiJ_P0024812 Ctnna3 protein_coding protein_coding MGP_WSBEiJ_T0024813.1 MGP_WSBEiJ_G0016713.1 mouse_genomes_project 10 62488270 64029903 + MGP_WSBEiJ_P0024813 Ctnna3 protein_coding protein_coding MGP_WSBEiJ_T0024814.1 MGP_WSBEiJ_G0016713.1 mouse_genomes_project 10 62555384 62567885 + Ctnna3 protein_coding processed_transcript MGP_WSBEiJ_T0024815.1 MGP_WSBEiJ_G0016713.1 mouse_genomes_project 10 62794482 63061384 + Ctnna3 protein_coding processed_transcript MGP_WSBEiJ_T0025285.1 MGP_WSBEiJ_G0016817.1 mouse_genomes_project 10 78266280 78269548 - MGP_WSBEiJ_P0025285 Gm9978 protein_coding protein_coding MGP_WSBEiJ_T0026768.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130867093 130875373 - MGP_WSBEiJ_P0026768 Nabp2 protein_coding protein_coding MGP_WSBEiJ_T0026769.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130867093 130875519 - MGP_WSBEiJ_P0026769 Nabp2 protein_coding protein_coding MGP_WSBEiJ_T0026770.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130867172 130875367 - MGP_WSBEiJ_P0026770 Nabp2 protein_coding protein_coding MGP_WSBEiJ_T0026771.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130867288 130874488 - Nabp2 protein_coding retained_intron MGP_WSBEiJ_T0026772.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130867598 130875277 - MGP_WSBEiJ_P0026772 Nabp2 protein_coding protein_coding MGP_WSBEiJ_T0026773.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130867608 130876206 - MGP_WSBEiJ_P0026773 Nabp2 protein_coding protein_coding MGP_WSBEiJ_T0026774.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130873807 130874825 - MGP_WSBEiJ_P0026774 Nabp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026775.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130874363 130877147 - MGP_WSBEiJ_P0026775 Nabp2 protein_coding protein_coding MGP_WSBEiJ_T0026776.1 MGP_WSBEiJ_G0017246.1 mouse_genomes_project 10 130874391 130875381 - MGP_WSBEiJ_P0026776 Nabp2 protein_coding protein_coding MGP_WSBEiJ_T0026850.1 MGP_WSBEiJ_G0017280.1 mouse_genomes_project 10 131743951 131744905 - MGP_WSBEiJ_P0026850 Olfr771 protein_coding protein_coding MGP_WSBEiJ_T0026840.1 MGP_WSBEiJ_G0017273.1 mouse_genomes_project 10 131448312 131474161 + MGP_WSBEiJ_P0026840 Itga7 protein_coding protein_coding MGP_WSBEiJ_T0025344.1 MGP_WSBEiJ_G0016845.1 mouse_genomes_project 10 79584884 79604329 + MGP_WSBEiJ_P0025344 Hcn2 protein_coding protein_coding MGP_WSBEiJ_T0026784.1 MGP_WSBEiJ_G0017250.1 mouse_genomes_project 10 130966118 130972860 - MGP_WSBEiJ_P0026784 Myl6b protein_coding protein_coding MGP_WSBEiJ_T0025975.1 MGP_WSBEiJ_G0017003.1 mouse_genomes_project 10 86973446 87048526 + MGP_WSBEiJ_P0025975 Ttc41 protein_coding protein_coding MGP_WSBEiJ_T0025976.1 MGP_WSBEiJ_G0017003.1 mouse_genomes_project 10 86973446 86995736 + MGP_WSBEiJ_P0025976 Ttc41 protein_coding protein_coding MGP_WSBEiJ_T0009482.1 MGP_WSBEiJ_G0007639.1 mouse_genomes_project 10 123746223 123746299 - Gm24330 miRNA miRNA MGP_WSBEiJ_T0026526.1 MGP_WSBEiJ_G0017165.1 mouse_genomes_project 10 123484358 123517757 + MGP_WSBEiJ_P0026526 Gns protein_coding protein_coding MGP_WSBEiJ_T0000789.1 MGP_WSBEiJ_G0000729.1 mouse_genomes_project 10 72651903 72652296 - TEC TEC MGP_WSBEiJ_T0003029.1 MGP_WSBEiJ_G0002826.1 mouse_genomes_project 10 121847981 121876451 - Grip1os1 antisense antisense MGP_WSBEiJ_T0003030.1 MGP_WSBEiJ_G0002826.1 mouse_genomes_project 10 121871233 121876338 - Grip1os1 antisense antisense MGP_WSBEiJ_T0025291.1 MGP_WSBEiJ_G0016821.1 mouse_genomes_project 10 78501443 78507647 - MGP_WSBEiJ_P0025291 Casp14 protein_coding protein_coding MGP_WSBEiJ_T0009445.1 MGP_WSBEiJ_G0007602.1 mouse_genomes_project 10 77329444 77329528 + Mir1930 miRNA miRNA MGP_WSBEiJ_T0012163.1 MGP_WSBEiJ_G0010293.1 mouse_genomes_project 10 41811543 41811898 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023837.1 MGP_WSBEiJ_G0016406.1 mouse_genomes_project 10 4862328 4902510 + MGP_WSBEiJ_P0023837 Zc3h12d protein_coding protein_coding MGP_WSBEiJ_T0024551.1 MGP_WSBEiJ_G0016645.1 mouse_genomes_project 10 57209304 57288090 - MGP_WSBEiJ_P0024551 Edar protein_coding protein_coding MGP_WSBEiJ_T0025978.1 MGP_WSBEiJ_G0017005.1 mouse_genomes_project 10 87114740 87289379 - MGP_WSBEiJ_P0025978 Stab2 protein_coding protein_coding MGP_WSBEiJ_T0025979.1 MGP_WSBEiJ_G0017005.1 mouse_genomes_project 10 87114863 87167042 - MGP_WSBEiJ_P0025979 Stab2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025980.1 MGP_WSBEiJ_G0017005.1 mouse_genomes_project 10 87146564 87154183 - Stab2 protein_coding retained_intron MGP_WSBEiJ_T0025981.1 MGP_WSBEiJ_G0017005.1 mouse_genomes_project 10 87148533 87161188 - Stab2 protein_coding retained_intron MGP_WSBEiJ_T0025982.1 MGP_WSBEiJ_G0017005.1 mouse_genomes_project 10 87197059 87218921 - Stab2 protein_coding processed_transcript MGP_WSBEiJ_T0025983.1 MGP_WSBEiJ_G0017005.1 mouse_genomes_project 10 87271461 87289376 - Stab2 protein_coding processed_transcript MGP_WSBEiJ_T0025984.1 MGP_WSBEiJ_G0017005.1 mouse_genomes_project 10 87276159 87289366 - Stab2 protein_coding processed_transcript MGP_WSBEiJ_T0025486.1 MGP_WSBEiJ_G0016876.1 mouse_genomes_project 10 80073543 80077783 + MGP_WSBEiJ_P0025486 Cirbp protein_coding protein_coding MGP_WSBEiJ_T0025487.1 MGP_WSBEiJ_G0016876.1 mouse_genomes_project 10 80075271 80079122 + MGP_WSBEiJ_P0025487 Cirbp protein_coding protein_coding MGP_WSBEiJ_T0025488.1 MGP_WSBEiJ_G0016876.1 mouse_genomes_project 10 80075333 80080252 + MGP_WSBEiJ_P0025488 Cirbp protein_coding protein_coding MGP_WSBEiJ_T0025489.1 MGP_WSBEiJ_G0016876.1 mouse_genomes_project 10 80075356 80077596 + Cirbp protein_coding retained_intron MGP_WSBEiJ_T0025490.1 MGP_WSBEiJ_G0016876.1 mouse_genomes_project 10 80075379 80078604 + Cirbp protein_coding retained_intron MGP_WSBEiJ_T0025491.1 MGP_WSBEiJ_G0016876.1 mouse_genomes_project 10 80077693 80078671 + Cirbp protein_coding retained_intron MGP_WSBEiJ_T0025492.1 MGP_WSBEiJ_G0016876.1 mouse_genomes_project 10 80079448 80080165 + Cirbp protein_coding retained_intron MGP_WSBEiJ_T0026520.1 MGP_WSBEiJ_G0017162.1 mouse_genomes_project 10 123023041 123082669 - MGP_WSBEiJ_P0026520 Lemd3 protein_coding protein_coding MGP_WSBEiJ_T0026521.1 MGP_WSBEiJ_G0017162.1 mouse_genomes_project 10 123023482 123082669 - MGP_WSBEiJ_P0026521 Lemd3 protein_coding protein_coding MGP_WSBEiJ_T0026217.1 MGP_WSBEiJ_G0017054.1 mouse_genomes_project 10 95341175 95444936 + MGP_WSBEiJ_P0026217 Cep83 protein_coding protein_coding MGP_WSBEiJ_T0026244.1 MGP_WSBEiJ_G0017069.1 mouse_genomes_project 10 98529780 98531651 + MGP_WSBEiJ_P0026244 Ccer1 protein_coding protein_coding MGP_WSBEiJ_T0024108.1 MGP_WSBEiJ_G0016491.1 mouse_genomes_project 10 21727846 21740893 - MGP_WSBEiJ_P0024108 Taar9 protein_coding protein_coding MGP_WSBEiJ_T0026622.1 MGP_WSBEiJ_G0017200.1 mouse_genomes_project 10 129647068 129652583 + MGP_WSBEiJ_P0026622 Ddit3 protein_coding protein_coding MGP_WSBEiJ_T0026623.1 MGP_WSBEiJ_G0017200.1 mouse_genomes_project 10 129647087 129652360 + MGP_WSBEiJ_P0026623 Ddit3 protein_coding protein_coding MGP_WSBEiJ_T0026624.1 MGP_WSBEiJ_G0017200.1 mouse_genomes_project 10 129647088 129650877 + Ddit3 protein_coding retained_intron MGP_WSBEiJ_T0025826.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81682021 81691765 + MGP_WSBEiJ_P0025826 protein_coding protein_coding MGP_WSBEiJ_T0025827.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81682060 81683217 + MGP_WSBEiJ_P0025827 protein_coding protein_coding MGP_WSBEiJ_T0025828.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81682187 81683212 + MGP_WSBEiJ_P0025828 protein_coding protein_coding MGP_WSBEiJ_T0025829.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81687164 81696488 + MGP_WSBEiJ_P0025829 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025830.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81687168 81703502 + protein_coding retained_intron MGP_WSBEiJ_T0025831.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81687168 81689886 + MGP_WSBEiJ_P0025831 protein_coding protein_coding MGP_WSBEiJ_T0025832.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81687174 81689363 + protein_coding retained_intron MGP_WSBEiJ_T0025833.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81687174 81693364 + MGP_WSBEiJ_P0025833 protein_coding protein_coding MGP_WSBEiJ_T0025834.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81687182 81700648 + MGP_WSBEiJ_P0025834 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025835.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81688003 81691547 + MGP_WSBEiJ_P0025835 protein_coding protein_coding MGP_WSBEiJ_T0025836.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81694396 81696428 + MGP_WSBEiJ_P0025836 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025837.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81694408 81699438 + protein_coding retained_intron MGP_WSBEiJ_T0025838.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81697279 81703369 + MGP_WSBEiJ_P0025838 protein_coding protein_coding MGP_WSBEiJ_T0025839.1 MGP_WSBEiJ_G0016960.1 mouse_genomes_project 10 81700102 81700632 + protein_coding retained_intron MGP_WSBEiJ_T0025737.1 MGP_WSBEiJ_G0016944.1 mouse_genomes_project 10 81380506 81389257 + MGP_WSBEiJ_P0025737 Mfsd12 protein_coding protein_coding MGP_WSBEiJ_T0025738.1 MGP_WSBEiJ_G0016944.1 mouse_genomes_project 10 81380567 81384233 + MGP_WSBEiJ_P0025738 Mfsd12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024055.1 MGP_WSBEiJ_G0016465.1 mouse_genomes_project 10 18782645 18789180 + MGP_WSBEiJ_P0024055 Gm9923 protein_coding protein_coding MGP_WSBEiJ_T0024676.1 MGP_WSBEiJ_G0016681.1 mouse_genomes_project 10 60494489 60507480 + MGP_WSBEiJ_P0024676 Sar1a protein_coding protein_coding MGP_WSBEiJ_T0026759.1 MGP_WSBEiJ_G0017241.1 mouse_genomes_project 10 130782774 130788460 + MGP_WSBEiJ_P0026759 Cnpy2 protein_coding protein_coding MGP_WSBEiJ_T0024786.1 MGP_WSBEiJ_G0016706.1 mouse_genomes_project 10 61958785 61968506 - MGP_WSBEiJ_P0024786 Hnrnph3 protein_coding protein_coding MGP_WSBEiJ_T0024787.1 MGP_WSBEiJ_G0016706.1 mouse_genomes_project 10 61958785 61968506 - MGP_WSBEiJ_P0024787 Hnrnph3 protein_coding protein_coding MGP_WSBEiJ_T0024788.1 MGP_WSBEiJ_G0016706.1 mouse_genomes_project 10 61959549 61968829 - MGP_WSBEiJ_P0024788 Hnrnph3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024789.1 MGP_WSBEiJ_G0016706.1 mouse_genomes_project 10 61959552 61960290 - Hnrnph3 protein_coding retained_intron MGP_WSBEiJ_T0024790.1 MGP_WSBEiJ_G0016706.1 mouse_genomes_project 10 61960563 61962230 - Hnrnph3 protein_coding retained_intron MGP_WSBEiJ_T0024791.1 MGP_WSBEiJ_G0016706.1 mouse_genomes_project 10 61961952 61968459 - MGP_WSBEiJ_P0024791 Hnrnph3 protein_coding protein_coding MGP_WSBEiJ_T0002949.1 MGP_WSBEiJ_G0002768.1 mouse_genomes_project 10 31638629 31669293 + Gm15939 antisense antisense MGP_WSBEiJ_T0023967.1 MGP_WSBEiJ_G0016437.1 mouse_genomes_project 10 15131457 15143132 + Txlnb protein_coding retained_intron MGP_WSBEiJ_T0023968.1 MGP_WSBEiJ_G0016437.1 mouse_genomes_project 10 15131487 15179282 + MGP_WSBEiJ_P0023968 Txlnb protein_coding protein_coding MGP_WSBEiJ_T0003021.1 MGP_WSBEiJ_G0002822.1 mouse_genomes_project 10 118232864 118234684 + Kcnmb4os2 antisense antisense MGP_WSBEiJ_T0003022.1 MGP_WSBEiJ_G0002822.1 mouse_genomes_project 10 118233729 118235021 + Kcnmb4os2 antisense antisense MGP_WSBEiJ_T0003023.1 MGP_WSBEiJ_G0002822.1 mouse_genomes_project 10 118234046 118234689 + Kcnmb4os2 antisense antisense MGP_WSBEiJ_T0023848.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6860805 7014182 - MGP_WSBEiJ_P0023848 Stxbp5 protein_coding protein_coding MGP_WSBEiJ_T0023849.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6868257 7014578 - MGP_WSBEiJ_P0023849 Stxbp5 protein_coding protein_coding MGP_WSBEiJ_T0023850.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6868295 6909118 - Stxbp5 protein_coding processed_transcript MGP_WSBEiJ_T0023851.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6868880 6889054 - Stxbp5 protein_coding retained_intron MGP_WSBEiJ_T0023852.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6869212 7014182 - MGP_WSBEiJ_P0023852 Stxbp5 protein_coding protein_coding MGP_WSBEiJ_T0023853.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6875395 6878817 - Stxbp5 protein_coding retained_intron MGP_WSBEiJ_T0023854.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6875398 6877245 - Stxbp5 protein_coding retained_intron MGP_WSBEiJ_T0023855.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6875505 6887035 - Stxbp5 protein_coding retained_intron MGP_WSBEiJ_T0023856.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6877733 6909278 - MGP_WSBEiJ_P0023856 Stxbp5 protein_coding protein_coding MGP_WSBEiJ_T0023857.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6877899 6887035 - Stxbp5 protein_coding retained_intron MGP_WSBEiJ_T0023858.1 MGP_WSBEiJ_G0016412.1 mouse_genomes_project 10 6898631 6909249 - Stxbp5 protein_coding retained_intron MGP_WSBEiJ_T0024237.1 MGP_WSBEiJ_G0016544.1 mouse_genomes_project 10 32578841 32716845 + MGP_WSBEiJ_P0024237 Frk protein_coding protein_coding MGP_WSBEiJ_T0024238.1 MGP_WSBEiJ_G0016544.1 mouse_genomes_project 10 32578841 32716845 + MGP_WSBEiJ_P0024238 Frk protein_coding protein_coding MGP_WSBEiJ_T0025549.1 MGP_WSBEiJ_G0016889.1 mouse_genomes_project 10 80283062 80292139 + MGP_WSBEiJ_P0025549 Plk5 protein_coding protein_coding MGP_WSBEiJ_T0025550.1 MGP_WSBEiJ_G0016889.1 mouse_genomes_project 10 80283062 80292139 + MGP_WSBEiJ_P0025550 Plk5 protein_coding protein_coding MGP_WSBEiJ_T0025551.1 MGP_WSBEiJ_G0016889.1 mouse_genomes_project 10 80284582 80287131 + Plk5 protein_coding retained_intron MGP_WSBEiJ_T0025552.1 MGP_WSBEiJ_G0016889.1 mouse_genomes_project 10 80285873 80287389 + Plk5 protein_coding retained_intron MGP_WSBEiJ_T0026354.1 MGP_WSBEiJ_G0017106.1 mouse_genomes_project 10 112592172 112731468 + MGP_WSBEiJ_P0026354 Osbpl8 protein_coding protein_coding MGP_WSBEiJ_T0026355.1 MGP_WSBEiJ_G0017106.1 mouse_genomes_project 10 112592172 112731468 + MGP_WSBEiJ_P0026355 Osbpl8 protein_coding protein_coding MGP_WSBEiJ_T0024413.1 MGP_WSBEiJ_G0016594.1 mouse_genomes_project 10 41715185 41896347 + MGP_WSBEiJ_P0024413 Pdss2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024414.1 MGP_WSBEiJ_G0016594.1 mouse_genomes_project 10 41715185 41939912 + MGP_WSBEiJ_P0024414 Pdss2 protein_coding protein_coding MGP_WSBEiJ_T0024415.1 MGP_WSBEiJ_G0016594.1 mouse_genomes_project 10 41715216 41837541 + Pdss2 protein_coding retained_intron MGP_WSBEiJ_T0024416.1 MGP_WSBEiJ_G0016594.1 mouse_genomes_project 10 41715299 41966303 + MGP_WSBEiJ_P0024416 Pdss2 protein_coding protein_coding MGP_WSBEiJ_T0024417.1 MGP_WSBEiJ_G0016594.1 mouse_genomes_project 10 41715435 41837138 + Pdss2 protein_coding retained_intron MGP_WSBEiJ_T0024418.1 MGP_WSBEiJ_G0016594.1 mouse_genomes_project 10 41882652 41939558 + MGP_WSBEiJ_P0024418 Pdss2 protein_coding protein_coding MGP_WSBEiJ_T0026565.1 MGP_WSBEiJ_G0017179.1 mouse_genomes_project 10 128228548 128283280 + MGP_WSBEiJ_P0026565 Lrig3 protein_coding protein_coding MGP_WSBEiJ_T0097261.1 MGP_WSBEiJ_G0035941.1 mouse_genomes_project 10 95046936 95048778 + Gm16155 sense_intronic sense_intronic MGP_WSBEiJ_T0026473.1 MGP_WSBEiJ_G0017151.1 mouse_genomes_project 10 120372726 120377572 + MGP_WSBEiJ_P0026473 Ifng protein_coding protein_coding MGP_WSBEiJ_T0023833.1 MGP_WSBEiJ_G0016405.1 mouse_genomes_project 10 4820139 4852247 + MGP_WSBEiJ_P0023833 Ppil4 protein_coding protein_coding MGP_WSBEiJ_T0023834.1 MGP_WSBEiJ_G0016405.1 mouse_genomes_project 10 4820156 4836512 + Ppil4 protein_coding retained_intron MGP_WSBEiJ_T0023835.1 MGP_WSBEiJ_G0016405.1 mouse_genomes_project 10 4820169 4841993 + MGP_WSBEiJ_P0023835 Ppil4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023836.1 MGP_WSBEiJ_G0016405.1 mouse_genomes_project 10 4827223 4834542 + Ppil4 protein_coding retained_intron MGP_WSBEiJ_T0025965.1 MGP_WSBEiJ_G0017001.1 mouse_genomes_project 10 86951470 86954796 + MGP_WSBEiJ_P0025965 1190007I07Rik protein_coding protein_coding MGP_WSBEiJ_T0025966.1 MGP_WSBEiJ_G0017001.1 mouse_genomes_project 10 86951499 86954887 + MGP_WSBEiJ_P0025966 1190007I07Rik protein_coding protein_coding MGP_WSBEiJ_T0025967.1 MGP_WSBEiJ_G0017001.1 mouse_genomes_project 10 86951505 86954711 + MGP_WSBEiJ_P0025967 1190007I07Rik protein_coding protein_coding MGP_WSBEiJ_T0025968.1 MGP_WSBEiJ_G0017001.1 mouse_genomes_project 10 86951558 86952317 + MGP_WSBEiJ_P0025968 1190007I07Rik protein_coding protein_coding MGP_WSBEiJ_T0025969.1 MGP_WSBEiJ_G0017001.1 mouse_genomes_project 10 86951771 86954887 + MGP_WSBEiJ_P0025969 1190007I07Rik protein_coding protein_coding MGP_WSBEiJ_T0025428.1 MGP_WSBEiJ_G0016867.1 mouse_genomes_project 10 79885000 79904080 + MGP_WSBEiJ_P0025428 Abca7 protein_coding protein_coding MGP_WSBEiJ_T0025429.1 MGP_WSBEiJ_G0016867.1 mouse_genomes_project 10 79886082 79904061 + MGP_WSBEiJ_P0025429 Abca7 protein_coding protein_coding MGP_WSBEiJ_T0025430.1 MGP_WSBEiJ_G0016867.1 mouse_genomes_project 10 79886121 79904076 + MGP_WSBEiJ_P0025430 Abca7 protein_coding protein_coding MGP_WSBEiJ_T0026701.1 MGP_WSBEiJ_G0017224.1 mouse_genomes_project 10 130323976 130338307 + MGP_WSBEiJ_P0026701 Sdr9c7 protein_coding protein_coding MGP_WSBEiJ_T0026702.1 MGP_WSBEiJ_G0017224.1 mouse_genomes_project 10 130324233 130338296 + Sdr9c7 protein_coding processed_transcript MGP_WSBEiJ_T0026703.1 MGP_WSBEiJ_G0017224.1 mouse_genomes_project 10 130327498 130336932 + Sdr9c7 protein_coding processed_transcript MGP_WSBEiJ_T0026704.1 MGP_WSBEiJ_G0017224.1 mouse_genomes_project 10 130328866 130336883 + Sdr9c7 protein_coding processed_transcript MGP_WSBEiJ_T0023888.1 MGP_WSBEiJ_G0016421.1 mouse_genomes_project 10 10082674 10113606 - MGP_WSBEiJ_P0023888 Stx11 protein_coding protein_coding MGP_WSBEiJ_T0023889.1 MGP_WSBEiJ_G0016421.1 mouse_genomes_project 10 10082674 10113606 - MGP_WSBEiJ_P0023889 Stx11 protein_coding protein_coding MGP_WSBEiJ_T0026900.1 MGP_WSBEiJ_G0017317.1 mouse_genomes_project 10 132790801 132810740 - MGP_WSBEiJ_P0026900 protein_coding protein_coding MGP_WSBEiJ_T0026901.1 MGP_WSBEiJ_G0017317.1 mouse_genomes_project 10 132790801 132814046 - MGP_WSBEiJ_P0026901 protein_coding protein_coding MGP_WSBEiJ_T0025213.1 MGP_WSBEiJ_G0016796.1 mouse_genomes_project 10 77403941 77404274 + MGP_WSBEiJ_P0025213 Gm10272 protein_coding protein_coding MGP_WSBEiJ_T0026604.1 MGP_WSBEiJ_G0017193.1 mouse_genomes_project 10 129518866 129527067 - MGP_WSBEiJ_P0026604 Slc26a10 protein_coding protein_coding MGP_WSBEiJ_T0012184.1 MGP_WSBEiJ_G0010314.1 mouse_genomes_project 10 79767048 79767298 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026329.1 MGP_WSBEiJ_G0017101.1 mouse_genomes_project 10 109829208 110372334 - MGP_WSBEiJ_P0026329 Syt1 protein_coding protein_coding MGP_WSBEiJ_T0026330.1 MGP_WSBEiJ_G0017101.1 mouse_genomes_project 10 109829212 110372341 - MGP_WSBEiJ_P0026330 Syt1 protein_coding protein_coding MGP_WSBEiJ_T0026331.1 MGP_WSBEiJ_G0017101.1 mouse_genomes_project 10 109965749 109975431 - Syt1 protein_coding retained_intron MGP_WSBEiJ_T0026332.1 MGP_WSBEiJ_G0017101.1 mouse_genomes_project 10 109965805 110370464 - MGP_WSBEiJ_P0026332 Syt1 protein_coding protein_coding MGP_WSBEiJ_T0026333.1 MGP_WSBEiJ_G0017101.1 mouse_genomes_project 10 110249738 110372321 - Syt1 protein_coding retained_intron MGP_WSBEiJ_T0026334.1 MGP_WSBEiJ_G0017101.1 mouse_genomes_project 10 110249952 110370453 - Syt1 protein_coding retained_intron MGP_WSBEiJ_T0024282.1 MGP_WSBEiJ_G0016555.1 mouse_genomes_project 10 38016921 38164019 + MGP_WSBEiJ_P0024282 Rev3l protein_coding protein_coding MGP_WSBEiJ_T0024283.1 MGP_WSBEiJ_G0016555.1 mouse_genomes_project 10 38016930 38163976 + MGP_WSBEiJ_P0024283 Rev3l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024284.1 MGP_WSBEiJ_G0016555.1 mouse_genomes_project 10 38017167 38164014 + MGP_WSBEiJ_P0024284 Rev3l protein_coding protein_coding MGP_WSBEiJ_T0024285.1 MGP_WSBEiJ_G0016555.1 mouse_genomes_project 10 38114000 38164016 + MGP_WSBEiJ_P0024285 Rev3l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024286.1 MGP_WSBEiJ_G0016555.1 mouse_genomes_project 10 38117143 38131631 + Rev3l protein_coding retained_intron MGP_WSBEiJ_T0024287.1 MGP_WSBEiJ_G0016555.1 mouse_genomes_project 10 38147732 38151778 + Rev3l protein_coding retained_intron MGP_WSBEiJ_T0024288.1 MGP_WSBEiJ_G0016555.1 mouse_genomes_project 10 38155916 38163296 + Rev3l protein_coding retained_intron MGP_WSBEiJ_T0000790.1 MGP_WSBEiJ_G0000730.1 mouse_genomes_project 10 76631029 76631707 - TEC TEC MGP_WSBEiJ_T0012158.1 MGP_WSBEiJ_G0010288.1 mouse_genomes_project 10 29527736 29529039 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097260.1 MGP_WSBEiJ_G0035940.1 mouse_genomes_project 10 80545230 80547059 - Gm29093 sense_intronic sense_intronic MGP_WSBEiJ_T0098858.1 MGP_WSBEiJ_G0037521.1 mouse_genomes_project 10 61856001 61856130 - Gm25862 snoRNA snoRNA MGP_WSBEiJ_T0026517.1 MGP_WSBEiJ_G0017161.1 mouse_genomes_project 10 122879829 122996925 - MGP_WSBEiJ_P0026517 Msrb3 protein_coding protein_coding MGP_WSBEiJ_T0026518.1 MGP_WSBEiJ_G0017161.1 mouse_genomes_project 10 122882520 122950905 - Msrb3 protein_coding processed_transcript MGP_WSBEiJ_T0026519.1 MGP_WSBEiJ_G0017161.1 mouse_genomes_project 10 122882662 122971814 - MGP_WSBEiJ_P0026519 Msrb3 protein_coding protein_coding MGP_WSBEiJ_T0026760.1 MGP_WSBEiJ_G0017242.1 mouse_genomes_project 10 130799771 130825559 + MGP_WSBEiJ_P0026760 Cs protein_coding protein_coding MGP_WSBEiJ_T0025041.1 MGP_WSBEiJ_G0016751.1 mouse_genomes_project 10 75054695 75074282 + MGP_WSBEiJ_P0025041 Snrpd3 protein_coding protein_coding MGP_WSBEiJ_T0025042.1 MGP_WSBEiJ_G0016751.1 mouse_genomes_project 10 75055158 75057011 + Snrpd3 protein_coding retained_intron MGP_WSBEiJ_T0024230.1 MGP_WSBEiJ_G0016541.1 mouse_genomes_project 10 32314637 32341247 - Nt5dc1 protein_coding processed_transcript MGP_WSBEiJ_T0024232.1 MGP_WSBEiJ_G0016541.1 mouse_genomes_project 10 32330670 32449181 - MGP_WSBEiJ_P0024232 Nt5dc1 protein_coding protein_coding MGP_WSBEiJ_T0024233.1 MGP_WSBEiJ_G0016541.1 mouse_genomes_project 10 32330670 32449168 - MGP_WSBEiJ_P0024233 Nt5dc1 protein_coding protein_coding MGP_WSBEiJ_T0024234.1 MGP_WSBEiJ_G0016541.1 mouse_genomes_project 10 32331326 32449157 - Nt5dc1 protein_coding processed_transcript MGP_WSBEiJ_T0024236.1 MGP_WSBEiJ_G0016541.1 mouse_genomes_project 10 32425892 32449110 - MGP_WSBEiJ_P0024236 Nt5dc1 protein_coding protein_coding MGP_WSBEiJ_T0002948.1 MGP_WSBEiJ_G0002767.1 mouse_genomes_project 10 25159588 25166938 + 4930579H20Rik antisense antisense MGP_WSBEiJ_T0024318.1 MGP_WSBEiJ_G0016573.1 mouse_genomes_project 10 39723418 39856760 + MGP_WSBEiJ_P0024318 Ak9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024319.1 MGP_WSBEiJ_G0016573.1 mouse_genomes_project 10 39769339 39859672 + MGP_WSBEiJ_P0024319 Ak9 protein_coding protein_coding MGP_WSBEiJ_T0023859.1 MGP_WSBEiJ_G0016413.1 mouse_genomes_project 10 7456114 7592169 - MGP_WSBEiJ_P0023859 protein_coding protein_coding MGP_WSBEiJ_T0023860.1 MGP_WSBEiJ_G0016413.1 mouse_genomes_project 10 7456120 7535478 - MGP_WSBEiJ_P0023860 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023861.1 MGP_WSBEiJ_G0016413.1 mouse_genomes_project 10 7456120 7592148 - MGP_WSBEiJ_P0023861 protein_coding protein_coding MGP_WSBEiJ_T0023862.1 MGP_WSBEiJ_G0016413.1 mouse_genomes_project 10 7456349 7592136 - MGP_WSBEiJ_P0023862 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023863.1 MGP_WSBEiJ_G0016413.1 mouse_genomes_project 10 7522268 7550599 - MGP_WSBEiJ_P0023863 protein_coding protein_coding MGP_WSBEiJ_T0023864.1 MGP_WSBEiJ_G0016413.1 mouse_genomes_project 10 7522926 7592148 - MGP_WSBEiJ_P0023864 protein_coding protein_coding MGP_WSBEiJ_T0024518.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56523367 56632109 + MGP_WSBEiJ_P0024518 Pkib protein_coding protein_coding MGP_WSBEiJ_T0024519.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56523437 56634785 + MGP_WSBEiJ_P0024519 Pkib protein_coding protein_coding MGP_WSBEiJ_T0024520.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56523442 56600771 + Pkib protein_coding retained_intron MGP_WSBEiJ_T0024521.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56523510 56621317 + MGP_WSBEiJ_P0024521 Pkib protein_coding protein_coding MGP_WSBEiJ_T0024522.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56532335 56608133 + Pkib protein_coding processed_transcript MGP_WSBEiJ_T0024523.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56537329 56629542 + MGP_WSBEiJ_P0024523 Pkib protein_coding protein_coding MGP_WSBEiJ_T0024524.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56537380 56629542 + MGP_WSBEiJ_P0024524 Pkib protein_coding protein_coding MGP_WSBEiJ_T0024525.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56542444 56630247 + MGP_WSBEiJ_P0024525 Pkib protein_coding protein_coding MGP_WSBEiJ_T0024526.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56542457 56629543 + MGP_WSBEiJ_P0024526 Pkib protein_coding protein_coding MGP_WSBEiJ_T0024527.1 MGP_WSBEiJ_G0016638.1 mouse_genomes_project 10 56621147 56629613 + Pkib protein_coding processed_transcript MGP_WSBEiJ_T0002976.1 MGP_WSBEiJ_G0002788.1 mouse_genomes_project 10 75512681 75516453 - Gm867 antisense antisense MGP_WSBEiJ_T0026157.1 MGP_WSBEiJ_G0017040.1 mouse_genomes_project 10 94087215 94121436 + MGP_WSBEiJ_P0026157 Hal protein_coding protein_coding MGP_WSBEiJ_T0026158.1 MGP_WSBEiJ_G0017040.1 mouse_genomes_project 10 94087250 94118079 + MGP_WSBEiJ_P0026158 Hal protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026159.1 MGP_WSBEiJ_G0017040.1 mouse_genomes_project 10 94096272 94100436 + Hal protein_coding retained_intron MGP_WSBEiJ_T0026160.1 MGP_WSBEiJ_G0017040.1 mouse_genomes_project 10 94100903 94118283 + Hal protein_coding processed_transcript MGP_WSBEiJ_T0098839.1 MGP_WSBEiJ_G0037502.1 mouse_genomes_project 10 21392665 21392739 - Snord100 snoRNA snoRNA MGP_WSBEiJ_T0023728.1 MGP_WSBEiJ_G0016384.1 mouse_genomes_project 10 1481003 1572571 + MGP_WSBEiJ_P0023728 Ccdc170 protein_coding protein_coding MGP_WSBEiJ_T0023729.1 MGP_WSBEiJ_G0016384.1 mouse_genomes_project 10 1509032 1569164 + MGP_WSBEiJ_P0023729 Ccdc170 protein_coding protein_coding MGP_WSBEiJ_T0023730.1 MGP_WSBEiJ_G0016384.1 mouse_genomes_project 10 1510692 1513512 + MGP_WSBEiJ_P0023730 Ccdc170 protein_coding protein_coding MGP_WSBEiJ_T0023731.1 MGP_WSBEiJ_G0016384.1 mouse_genomes_project 10 1541530 1550186 + Ccdc170 protein_coding processed_transcript MGP_WSBEiJ_T0023998.1 MGP_WSBEiJ_G0016447.1 mouse_genomes_project 10 16246354 16259261 + MGP_WSBEiJ_P0023998 Perp protein_coding protein_coding MGP_WSBEiJ_T0023711.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1392668 1415613 - MGP_WSBEiJ_P0023711 Rmnd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023712.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1395413 1425753 - MGP_WSBEiJ_P0023712 Rmnd1 protein_coding protein_coding MGP_WSBEiJ_T0023713.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1396615 1401539 - Rmnd1 protein_coding retained_intron MGP_WSBEiJ_T0023714.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1396990 1401350 - MGP_WSBEiJ_P0023714 Rmnd1 protein_coding protein_coding MGP_WSBEiJ_T0023715.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1397428 1406796 - Rmnd1 protein_coding retained_intron MGP_WSBEiJ_T0023716.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1419149 1425709 - Rmnd1 protein_coding retained_intron MGP_WSBEiJ_T0023717.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1420298 1425660 - MGP_WSBEiJ_P0023717 Rmnd1 protein_coding protein_coding MGP_WSBEiJ_T0023718.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1420500 1425699 - MGP_WSBEiJ_P0023718 Rmnd1 protein_coding protein_coding MGP_WSBEiJ_T0023719.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1420578 1425699 - MGP_WSBEiJ_P0023719 Rmnd1 protein_coding protein_coding MGP_WSBEiJ_T0023720.1 MGP_WSBEiJ_G0016382.1 mouse_genomes_project 10 1421900 1425666 - Rmnd1 protein_coding retained_intron MGP_WSBEiJ_T0024708.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61131529 61209505 - MGP_WSBEiJ_P0024708 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024709.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61131778 61251591 - MGP_WSBEiJ_P0024709 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024710.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61131782 61227835 - MGP_WSBEiJ_P0024710 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024711.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61132583 61211682 - MGP_WSBEiJ_P0024711 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024712.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61147163 61152562 - Hk1 protein_coding retained_intron MGP_WSBEiJ_T0024713.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61157960 61184509 - MGP_WSBEiJ_P0024713 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024714.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61158193 61195503 - MGP_WSBEiJ_P0024714 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024715.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61160061 61211659 - MGP_WSBEiJ_P0024715 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024716.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61160306 61211668 - Hk1 protein_coding retained_intron MGP_WSBEiJ_T0024717.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61251535 - MGP_WSBEiJ_P0024717 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024718.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61246783 - MGP_WSBEiJ_P0024718 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024719.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61251535 - MGP_WSBEiJ_P0024719 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024720.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61246783 - MGP_WSBEiJ_P0024720 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024721.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61246783 - MGP_WSBEiJ_P0024721 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024722.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61246783 - MGP_WSBEiJ_P0024722 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024723.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61246783 - MGP_WSBEiJ_P0024723 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024724.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61246783 - MGP_WSBEiJ_P0024724 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024725.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61251535 - MGP_WSBEiJ_P0024725 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024726.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180723 61246783 - MGP_WSBEiJ_P0024726 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0024727.1 MGP_WSBEiJ_G0016691.1 mouse_genomes_project 10 61180768 61231747 - MGP_WSBEiJ_P0024727 Hk1 protein_coding protein_coding MGP_WSBEiJ_T0026371.1 MGP_WSBEiJ_G0017113.1 mouse_genomes_project 10 113613826 113641247 + MGP_WSBEiJ_P0026371 Glipr1l2 protein_coding protein_coding MGP_WSBEiJ_T0026372.1 MGP_WSBEiJ_G0017113.1 mouse_genomes_project 10 113613826 113640460 + MGP_WSBEiJ_P0026372 Glipr1l2 protein_coding protein_coding MGP_WSBEiJ_T0026002.1 MGP_WSBEiJ_G0017011.1 mouse_genomes_project 10 88399794 88459595 - MGP_WSBEiJ_P0026002 Parpbp protein_coding protein_coding MGP_WSBEiJ_T0026003.1 MGP_WSBEiJ_G0017011.1 mouse_genomes_project 10 88438496 88459532 - MGP_WSBEiJ_P0026003 Parpbp protein_coding protein_coding MGP_WSBEiJ_T0026004.1 MGP_WSBEiJ_G0017011.1 mouse_genomes_project 10 88438516 88459587 - MGP_WSBEiJ_P0026004 Parpbp protein_coding protein_coding MGP_WSBEiJ_T0026005.1 MGP_WSBEiJ_G0017011.1 mouse_genomes_project 10 88444980 88459532 - MGP_WSBEiJ_P0026005 Parpbp protein_coding protein_coding MGP_WSBEiJ_T0012146.1 MGP_WSBEiJ_G0010276.1 mouse_genomes_project 10 8534305 8535034 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026810.1 MGP_WSBEiJ_G0017258.1 mouse_genomes_project 10 131161077 131165109 - MGP_WSBEiJ_P0026810 Suox protein_coding protein_coding MGP_WSBEiJ_T0024180.1 MGP_WSBEiJ_G0016514.1 mouse_genomes_project 10 27128428 27162834 + MGP_WSBEiJ_P0024180 Echdc1 protein_coding protein_coding MGP_WSBEiJ_T0024181.1 MGP_WSBEiJ_G0016514.1 mouse_genomes_project 10 27128543 27161544 + MGP_WSBEiJ_P0024181 Echdc1 protein_coding protein_coding MGP_WSBEiJ_T0024182.1 MGP_WSBEiJ_G0016514.1 mouse_genomes_project 10 27128770 27163938 + MGP_WSBEiJ_P0024182 Echdc1 protein_coding protein_coding MGP_WSBEiJ_T0024183.1 MGP_WSBEiJ_G0016514.1 mouse_genomes_project 10 27128933 27151064 + Echdc1 protein_coding processed_transcript MGP_WSBEiJ_T0012157.1 MGP_WSBEiJ_G0010287.1 mouse_genomes_project 10 29459504 29460123 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009457.1 MGP_WSBEiJ_G0007614.1 mouse_genomes_project 10 81096698 81096758 - Mir5615-1 miRNA miRNA MGP_WSBEiJ_T0024277.1 MGP_WSBEiJ_G0016554.1 mouse_genomes_project 10 37892079 37937242 + MGP_WSBEiJ_P0024277 Traf3ip2 protein_coding protein_coding MGP_WSBEiJ_T0024278.1 MGP_WSBEiJ_G0016554.1 mouse_genomes_project 10 37922611 37928592 + Traf3ip2 protein_coding retained_intron MGP_WSBEiJ_T0024279.1 MGP_WSBEiJ_G0016554.1 mouse_genomes_project 10 37928956 37933755 + Traf3ip2 protein_coding processed_transcript MGP_WSBEiJ_T0024280.1 MGP_WSBEiJ_G0016554.1 mouse_genomes_project 10 37929547 37936758 + Traf3ip2 protein_coding retained_intron MGP_WSBEiJ_T0024281.1 MGP_WSBEiJ_G0016554.1 mouse_genomes_project 10 37933389 37936760 + Traf3ip2 protein_coding retained_intron MGP_WSBEiJ_T0025231.1 MGP_WSBEiJ_G0016805.1 mouse_genomes_project 10 77710428 77717356 + MGP_WSBEiJ_P0025231 1810043G02Rik protein_coding protein_coding MGP_WSBEiJ_T0025232.1 MGP_WSBEiJ_G0016805.1 mouse_genomes_project 10 77710558 77717177 + 1810043G02Rik protein_coding retained_intron MGP_WSBEiJ_T0025233.1 MGP_WSBEiJ_G0016805.1 mouse_genomes_project 10 77710575 77717356 + 1810043G02Rik protein_coding retained_intron MGP_WSBEiJ_T0025234.1 MGP_WSBEiJ_G0016805.1 mouse_genomes_project 10 77710577 77718839 + MGP_WSBEiJ_P0025234 1810043G02Rik protein_coding protein_coding MGP_WSBEiJ_T0025235.1 MGP_WSBEiJ_G0016805.1 mouse_genomes_project 10 77710585 77717358 + 1810043G02Rik protein_coding retained_intron MGP_WSBEiJ_T0025236.1 MGP_WSBEiJ_G0016805.1 mouse_genomes_project 10 77710597 77712425 + 1810043G02Rik protein_coding processed_transcript MGP_WSBEiJ_T0025237.1 MGP_WSBEiJ_G0016805.1 mouse_genomes_project 10 77712395 77716394 + 1810043G02Rik protein_coding processed_transcript MGP_WSBEiJ_T0025238.1 MGP_WSBEiJ_G0016805.1 mouse_genomes_project 10 77713700 77714833 + 1810043G02Rik protein_coding processed_transcript MGP_WSBEiJ_T0025402.1 MGP_WSBEiJ_G0016858.1 mouse_genomes_project 10 79774353 79791063 - MGP_WSBEiJ_P0025402 Med16 protein_coding protein_coding MGP_WSBEiJ_T0025403.1 MGP_WSBEiJ_G0016858.1 mouse_genomes_project 10 79774682 79791040 - MGP_WSBEiJ_P0025403 Med16 protein_coding protein_coding MGP_WSBEiJ_T0025404.1 MGP_WSBEiJ_G0016858.1 mouse_genomes_project 10 79777994 79779444 - Med16 protein_coding retained_intron MGP_WSBEiJ_T0025405.1 MGP_WSBEiJ_G0016858.1 mouse_genomes_project 10 79781620 79790960 - Med16 protein_coding retained_intron MGP_WSBEiJ_T0025406.1 MGP_WSBEiJ_G0016858.1 mouse_genomes_project 10 79782961 79791052 - MGP_WSBEiJ_P0025406 Med16 protein_coding protein_coding MGP_WSBEiJ_T0025407.1 MGP_WSBEiJ_G0016858.1 mouse_genomes_project 10 79783137 79790463 - MGP_WSBEiJ_P0025407 Med16 protein_coding protein_coding MGP_WSBEiJ_T0025408.1 MGP_WSBEiJ_G0016858.1 mouse_genomes_project 10 79783164 79791065 - MGP_WSBEiJ_P0025408 Med16 protein_coding protein_coding MGP_WSBEiJ_T0096897.1 MGP_WSBEiJ_G0035578.1 mouse_genomes_project 10 28531810 28531904 - Gm24189 rRNA rRNA MGP_WSBEiJ_T0026008.1 MGP_WSBEiJ_G0017013.1 mouse_genomes_project 10 88518357 88565242 + MGP_WSBEiJ_P0026008 Ccdc53 protein_coding protein_coding MGP_WSBEiJ_T0026009.1 MGP_WSBEiJ_G0017013.1 mouse_genomes_project 10 88518410 88534802 + MGP_WSBEiJ_P0026009 Ccdc53 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026010.1 MGP_WSBEiJ_G0017013.1 mouse_genomes_project 10 88518416 88565090 + MGP_WSBEiJ_P0026010 Ccdc53 protein_coding protein_coding MGP_WSBEiJ_T0026011.1 MGP_WSBEiJ_G0017013.1 mouse_genomes_project 10 88518435 88544842 + MGP_WSBEiJ_P0026011 Ccdc53 protein_coding protein_coding MGP_WSBEiJ_T0026012.1 MGP_WSBEiJ_G0017013.1 mouse_genomes_project 10 88518448 88534503 + Ccdc53 protein_coding retained_intron MGP_WSBEiJ_T0026013.1 MGP_WSBEiJ_G0017013.1 mouse_genomes_project 10 88518527 88544621 + MGP_WSBEiJ_P0026013 Ccdc53 protein_coding protein_coding MGP_WSBEiJ_T0026014.1 MGP_WSBEiJ_G0017013.1 mouse_genomes_project 10 88522708 88554123 + Ccdc53 protein_coding processed_transcript MGP_WSBEiJ_T0026015.1 MGP_WSBEiJ_G0017013.1 mouse_genomes_project 10 88554850 88565091 + Ccdc53 protein_coding processed_transcript MGP_WSBEiJ_T0025431.1 MGP_WSBEiJ_G0016868.1 mouse_genomes_project 10 79905160 79922075 + MGP_WSBEiJ_P0025431 Hmha1 protein_coding protein_coding MGP_WSBEiJ_T0025432.1 MGP_WSBEiJ_G0016868.1 mouse_genomes_project 10 79905246 79922072 + Hmha1 protein_coding retained_intron MGP_WSBEiJ_T0025433.1 MGP_WSBEiJ_G0016868.1 mouse_genomes_project 10 79905423 79922072 + MGP_WSBEiJ_P0025433 Hmha1 protein_coding protein_coding MGP_WSBEiJ_T0025434.1 MGP_WSBEiJ_G0016868.1 mouse_genomes_project 10 79910228 79922071 + MGP_WSBEiJ_P0025434 Hmha1 protein_coding protein_coding MGP_WSBEiJ_T0025435.1 MGP_WSBEiJ_G0016868.1 mouse_genomes_project 10 79912317 79922065 + Hmha1 protein_coding retained_intron MGP_WSBEiJ_T0024085.1 MGP_WSBEiJ_G0016474.1 mouse_genomes_project 10 20408565 20412399 - MGP_WSBEiJ_P0024085 Tcf21 protein_coding protein_coding MGP_WSBEiJ_T0025909.1 MGP_WSBEiJ_G0016982.1 mouse_genomes_project 10 84704625 84712200 - MGP_WSBEiJ_P0025909 Ckap4 protein_coding protein_coding MGP_WSBEiJ_T0025910.1 MGP_WSBEiJ_G0016982.1 mouse_genomes_project 10 84704956 84712348 - MGP_WSBEiJ_P0025910 Ckap4 protein_coding protein_coding MGP_WSBEiJ_T0098870.1 MGP_WSBEiJ_G0037533.1 mouse_genomes_project 10 102552725 102552857 + Gm26278 snoRNA snoRNA MGP_WSBEiJ_T0026405.1 MGP_WSBEiJ_G0017129.1 mouse_genomes_project 10 117849195 117851449 - MGP_WSBEiJ_P0026405 4933416C03Rik protein_coding protein_coding MGP_WSBEiJ_T0009464.1 MGP_WSBEiJ_G0007621.1 mouse_genomes_project 10 85551710 85551814 + Gm25281 miRNA miRNA MGP_WSBEiJ_T0026892.1 MGP_WSBEiJ_G0017310.1 mouse_genomes_project 10 132564043 132564862 - MGP_WSBEiJ_P0026892 protein_coding protein_coding MGP_WSBEiJ_T0006051.1 MGP_WSBEiJ_G0005053.1 mouse_genomes_project 10 92712137 92928677 - Gm20757 lincRNA lincRNA MGP_WSBEiJ_T0025007.1 MGP_WSBEiJ_G0016743.1 mouse_genomes_project 10 74449425 74529299 - MGP_WSBEiJ_P0025007 Rsph14 protein_coding protein_coding MGP_WSBEiJ_T0025008.1 MGP_WSBEiJ_G0016743.1 mouse_genomes_project 10 74449425 74529278 - MGP_WSBEiJ_P0025008 Rsph14 protein_coding protein_coding MGP_WSBEiJ_T0025009.1 MGP_WSBEiJ_G0016743.1 mouse_genomes_project 10 74449425 74529266 - MGP_WSBEiJ_P0025009 Rsph14 protein_coding protein_coding MGP_WSBEiJ_T0025010.1 MGP_WSBEiJ_G0016743.1 mouse_genomes_project 10 74453039 74529266 - MGP_WSBEiJ_P0025010 Rsph14 protein_coding protein_coding MGP_WSBEiJ_T0025011.1 MGP_WSBEiJ_G0016743.1 mouse_genomes_project 10 74455037 74529275 - MGP_WSBEiJ_P0025011 Rsph14 protein_coding protein_coding MGP_WSBEiJ_T0025015.1 MGP_WSBEiJ_G0016743.1 mouse_genomes_project 10 74519016 74529241 - MGP_WSBEiJ_P0025015 Rsph14 protein_coding protein_coding MGP_WSBEiJ_T0025016.1 MGP_WSBEiJ_G0016743.1 mouse_genomes_project 10 74521216 74529299 - Rsph14 protein_coding retained_intron MGP_WSBEiJ_T0025659.1 MGP_WSBEiJ_G0016925.1 mouse_genomes_project 10 81073093 81089216 - MGP_WSBEiJ_P0025659 Creb3l3 protein_coding protein_coding MGP_WSBEiJ_T0025660.1 MGP_WSBEiJ_G0016925.1 mouse_genomes_project 10 81078717 81081254 - Creb3l3 protein_coding retained_intron MGP_WSBEiJ_T0025661.1 MGP_WSBEiJ_G0016925.1 mouse_genomes_project 10 81079397 81080681 - Creb3l3 protein_coding retained_intron MGP_WSBEiJ_T0025662.1 MGP_WSBEiJ_G0016925.1 mouse_genomes_project 10 81081309 81088541 - Creb3l3 protein_coding processed_transcript MGP_WSBEiJ_T0096761.1 MGP_WSBEiJ_G0035442.1 mouse_genomes_project 10 80803248 80806873 + pseudogene pseudogene MGP_WSBEiJ_T0003013.1 MGP_WSBEiJ_G0002817.1 mouse_genomes_project 10 100052814 100058147 - Gm16239 antisense antisense MGP_WSBEiJ_T0024012.1 MGP_WSBEiJ_G0016451.1 mouse_genomes_project 10 17047187 17059849 + MGP_WSBEiJ_P0024012 Il22ra2 protein_coding protein_coding MGP_WSBEiJ_T0026590.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129400285 129406485 + MGP_WSBEiJ_P0026590 Cdk4 protein_coding protein_coding MGP_WSBEiJ_T0026591.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129400354 129405618 + MGP_WSBEiJ_P0026591 Cdk4 protein_coding protein_coding MGP_WSBEiJ_T0026592.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129400355 129404811 + MGP_WSBEiJ_P0026592 Cdk4 protein_coding protein_coding MGP_WSBEiJ_T0026593.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129400360 129405618 + MGP_WSBEiJ_P0026593 Cdk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026594.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129400365 129405910 + Cdk4 protein_coding retained_intron MGP_WSBEiJ_T0026595.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129400367 129403914 + Cdk4 protein_coding retained_intron MGP_WSBEiJ_T0026596.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129400619 129404865 + MGP_WSBEiJ_P0026596 Cdk4 protein_coding protein_coding MGP_WSBEiJ_T0026597.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129401049 129403949 + Cdk4 protein_coding retained_intron MGP_WSBEiJ_T0026598.1 MGP_WSBEiJ_G0017188.1 mouse_genomes_project 10 129404709 129405848 + Cdk4 protein_coding retained_intron MGP_WSBEiJ_T0026392.1 MGP_WSBEiJ_G0017125.1 mouse_genomes_project 10 117132708 117275132 - MGP_WSBEiJ_P0026392 Lgr5 protein_coding protein_coding MGP_WSBEiJ_T0026393.1 MGP_WSBEiJ_G0017125.1 mouse_genomes_project 10 117134410 117274845 - MGP_WSBEiJ_P0026393 Lgr5 protein_coding protein_coding MGP_WSBEiJ_T0026394.1 MGP_WSBEiJ_G0017125.1 mouse_genomes_project 10 117134410 117274845 - MGP_WSBEiJ_P0026394 Lgr5 protein_coding protein_coding MGP_WSBEiJ_T0026395.1 MGP_WSBEiJ_G0017125.1 mouse_genomes_project 10 117139036 117141383 - Lgr5 protein_coding retained_intron MGP_WSBEiJ_T0026396.1 MGP_WSBEiJ_G0017125.1 mouse_genomes_project 10 117145063 117275111 - Lgr5 protein_coding retained_intron MGP_WSBEiJ_T0026397.1 MGP_WSBEiJ_G0017125.1 mouse_genomes_project 10 117155772 117275111 - Lgr5 protein_coding retained_intron MGP_WSBEiJ_T0026398.1 MGP_WSBEiJ_G0017125.1 mouse_genomes_project 10 117208243 117275095 - Lgr5 protein_coding processed_transcript MGP_WSBEiJ_T0024426.1 MGP_WSBEiJ_G0016599.1 mouse_genomes_project 10 42392798 42421701 - MGP_WSBEiJ_P0024426 Qrsl1 protein_coding protein_coding MGP_WSBEiJ_T0024427.1 MGP_WSBEiJ_G0016599.1 mouse_genomes_project 10 42393032 42395789 - Qrsl1 protein_coding retained_intron MGP_WSBEiJ_T0024428.1 MGP_WSBEiJ_G0016599.1 mouse_genomes_project 10 42399467 42421701 - Qrsl1 protein_coding retained_intron MGP_WSBEiJ_T0026581.1 MGP_WSBEiJ_G0017185.1 mouse_genomes_project 10 129377917 129379689 + MGP_WSBEiJ_P0026581 Mettl1 protein_coding protein_coding MGP_WSBEiJ_T0026582.1 MGP_WSBEiJ_G0017185.1 mouse_genomes_project 10 129378435 129383143 + MGP_WSBEiJ_P0026582 Mettl1 protein_coding protein_coding MGP_WSBEiJ_T0026583.1 MGP_WSBEiJ_G0017185.1 mouse_genomes_project 10 129378460 129380522 + Mettl1 protein_coding retained_intron MGP_WSBEiJ_T0026584.1 MGP_WSBEiJ_G0017185.1 mouse_genomes_project 10 129378461 129382075 + MGP_WSBEiJ_P0026584 Mettl1 protein_coding protein_coding MGP_WSBEiJ_T0026585.1 MGP_WSBEiJ_G0017185.1 mouse_genomes_project 10 129378486 129382676 + MGP_WSBEiJ_P0026585 Mettl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002540.1 MGP_WSBEiJ_G0002447.1 mouse_genomes_project 10 32562346 32565382 + MGP_WSBEiJ_P0002540 TR_V_gene TR_V_gene MGP_WSBEiJ_T0026400.1 MGP_WSBEiJ_G0017127.1 mouse_genomes_project 10 117529748 117566028 + MGP_WSBEiJ_P0026400 Tspan8 protein_coding protein_coding MGP_WSBEiJ_T0026401.1 MGP_WSBEiJ_G0017127.1 mouse_genomes_project 10 117529748 117566028 + MGP_WSBEiJ_P0026401 Tspan8 protein_coding protein_coding MGP_WSBEiJ_T0026402.1 MGP_WSBEiJ_G0017127.1 mouse_genomes_project 10 117529748 117566028 + MGP_WSBEiJ_P0026402 Tspan8 protein_coding protein_coding MGP_WSBEiJ_T0098843.1 MGP_WSBEiJ_G0037506.1 mouse_genomes_project 10 33226946 33227080 + Gm26341 snoRNA snoRNA MGP_WSBEiJ_T0026385.1 MGP_WSBEiJ_G0017121.1 mouse_genomes_project 10 116957884 116985621 - MGP_WSBEiJ_P0026385 Rab21 protein_coding protein_coding MGP_WSBEiJ_T0009433.1 MGP_WSBEiJ_G0007590.1 mouse_genomes_project 10 50762376 50762513 + Gm24084 miRNA miRNA MGP_WSBEiJ_T0025864.1 MGP_WSBEiJ_G0016970.1 mouse_genomes_project 10 82845004 82857908 + Hcfc2 protein_coding processed_transcript MGP_WSBEiJ_T0025865.1 MGP_WSBEiJ_G0016970.1 mouse_genomes_project 10 82847854 82891084 + MGP_WSBEiJ_P0025865 Hcfc2 protein_coding protein_coding MGP_WSBEiJ_T0025866.1 MGP_WSBEiJ_G0016970.1 mouse_genomes_project 10 82848058 82861082 + MGP_WSBEiJ_P0025866 Hcfc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025867.1 MGP_WSBEiJ_G0016970.1 mouse_genomes_project 10 82877913 82890076 + MGP_WSBEiJ_P0025867 Hcfc2 protein_coding protein_coding MGP_WSBEiJ_T0009442.1 MGP_WSBEiJ_G0007599.1 mouse_genomes_project 10 61580021 61580072 + Mir7215 miRNA miRNA MGP_WSBEiJ_T0100458.1 MGP_WSBEiJ_G0038917.1 mouse_genomes_project 10 132147989 132148752 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0023999.1 MGP_WSBEiJ_G0016448.1 mouse_genomes_project 10 16418513 16434406 - MGP_WSBEiJ_P0023999 Tnfaip3 protein_coding protein_coding MGP_WSBEiJ_T0024000.1 MGP_WSBEiJ_G0016448.1 mouse_genomes_project 10 16418516 16429566 - MGP_WSBEiJ_P0024000 Tnfaip3 protein_coding protein_coding MGP_WSBEiJ_T0024001.1 MGP_WSBEiJ_G0016448.1 mouse_genomes_project 10 16418532 16434372 - Tnfaip3 protein_coding retained_intron MGP_WSBEiJ_T0024002.1 MGP_WSBEiJ_G0016448.1 mouse_genomes_project 10 16424870 16426449 - Tnfaip3 protein_coding retained_intron MGP_WSBEiJ_T0024003.1 MGP_WSBEiJ_G0016448.1 mouse_genomes_project 10 16425869 16434653 - MGP_WSBEiJ_P0024003 Tnfaip3 protein_coding protein_coding MGP_WSBEiJ_T0024004.1 MGP_WSBEiJ_G0016448.1 mouse_genomes_project 10 16429118 16432185 - MGP_WSBEiJ_P0024004 Tnfaip3 protein_coding protein_coding MGP_WSBEiJ_T0024145.1 MGP_WSBEiJ_G0016502.1 mouse_genomes_project 10 23694032 23796576 - MGP_WSBEiJ_P0024145 Tmem200a protein_coding protein_coding MGP_WSBEiJ_T0016522.1 MGP_WSBEiJ_G0014552.1 mouse_genomes_project 10 39987466 39995926 + 5730435O14Rik processed_transcript antisense MGP_WSBEiJ_T0016523.1 MGP_WSBEiJ_G0014552.1 mouse_genomes_project 10 39995015 39995915 + 5730435O14Rik processed_transcript retained_intron MGP_WSBEiJ_T0024298.1 MGP_WSBEiJ_G0016560.1 mouse_genomes_project 10 38308165 38333258 - MGP_WSBEiJ_P0024298 protein_coding protein_coding MGP_WSBEiJ_T0024299.1 MGP_WSBEiJ_G0016560.1 mouse_genomes_project 10 38315037 38333149 - protein_coding processed_transcript MGP_WSBEiJ_T0026535.1 MGP_WSBEiJ_G0017170.1 mouse_genomes_project 10 123863087 123876785 + MGP_WSBEiJ_P0026535 BC048403 protein_coding protein_coding MGP_WSBEiJ_T0026536.1 MGP_WSBEiJ_G0017170.1 mouse_genomes_project 10 123863088 123876798 + MGP_WSBEiJ_P0026536 BC048403 protein_coding protein_coding MGP_WSBEiJ_T0026537.1 MGP_WSBEiJ_G0017170.1 mouse_genomes_project 10 123874060 123875637 + BC048403 protein_coding processed_transcript MGP_WSBEiJ_T0024061.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19367663 19489776 + MGP_WSBEiJ_P0024061 Sgk1 protein_coding protein_coding MGP_WSBEiJ_T0024062.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19367848 19384595 + Sgk1 protein_coding processed_transcript MGP_WSBEiJ_T0024063.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19416657 19480226 + MGP_WSBEiJ_P0024063 Sgk1 protein_coding protein_coding MGP_WSBEiJ_T0024064.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19467980 19485761 + MGP_WSBEiJ_P0024064 Sgk1 protein_coding protein_coding MGP_WSBEiJ_T0024065.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19482047 19489781 + MGP_WSBEiJ_P0024065 Sgk1 protein_coding protein_coding MGP_WSBEiJ_T0024066.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19482047 19485742 + MGP_WSBEiJ_P0024066 Sgk1 protein_coding protein_coding MGP_WSBEiJ_T0024067.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19483749 19489774 + MGP_WSBEiJ_P0024067 Sgk1 protein_coding protein_coding MGP_WSBEiJ_T0024068.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19484542 19485469 + Sgk1 protein_coding retained_intron MGP_WSBEiJ_T0024069.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19484547 19489785 + MGP_WSBEiJ_P0024069 Sgk1 protein_coding protein_coding MGP_WSBEiJ_T0024070.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19484570 19486209 + Sgk1 protein_coding retained_intron MGP_WSBEiJ_T0024071.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19484769 19487312 + MGP_WSBEiJ_P0024071 Sgk1 protein_coding protein_coding MGP_WSBEiJ_T0024072.1 MGP_WSBEiJ_G0016468.1 mouse_genomes_project 10 19486458 19488118 + Sgk1 protein_coding retained_intron MGP_WSBEiJ_T0025394.1 MGP_WSBEiJ_G0016855.1 mouse_genomes_project 10 79751415 79760186 + Prtn3 protein_coding processed_transcript MGP_WSBEiJ_T0025395.1 MGP_WSBEiJ_G0016855.1 mouse_genomes_project 10 79756757 79760319 + MGP_WSBEiJ_P0025395 Prtn3 protein_coding protein_coding MGP_WSBEiJ_T0025396.1 MGP_WSBEiJ_G0016855.1 mouse_genomes_project 10 79758124 79760319 + Prtn3 protein_coding retained_intron MGP_WSBEiJ_T0025397.1 MGP_WSBEiJ_G0016855.1 mouse_genomes_project 10 79758148 79759534 + Prtn3 protein_coding retained_intron MGP_WSBEiJ_T0025398.1 MGP_WSBEiJ_G0016855.1 mouse_genomes_project 10 79758186 79759989 + MGP_WSBEiJ_P0025398 Prtn3 protein_coding protein_coding MGP_WSBEiJ_T0025399.1 MGP_WSBEiJ_G0016855.1 mouse_genomes_project 10 79758927 79760025 + Prtn3 protein_coding retained_intron MGP_WSBEiJ_T0026879.1 MGP_WSBEiJ_G0017301.1 mouse_genomes_project 10 132252121 132256958 - MGP_WSBEiJ_P0026879 Olfr802 protein_coding protein_coding MGP_WSBEiJ_T0026786.1 MGP_WSBEiJ_G0017252.1 mouse_genomes_project 10 131018926 131024741 - MGP_WSBEiJ_P0026786 Zc3h10 protein_coding protein_coding MGP_WSBEiJ_T0026787.1 MGP_WSBEiJ_G0017252.1 mouse_genomes_project 10 131021764 131024710 - Zc3h10 protein_coding processed_transcript MGP_WSBEiJ_T0026788.1 MGP_WSBEiJ_G0017252.1 mouse_genomes_project 10 131022046 131024606 - Zc3h10 protein_coding processed_transcript MGP_WSBEiJ_T0026789.1 MGP_WSBEiJ_G0017252.1 mouse_genomes_project 10 131022304 131024692 - Zc3h10 protein_coding processed_transcript MGP_WSBEiJ_T0025084.1 MGP_WSBEiJ_G0016762.1 mouse_genomes_project 10 75401298 75404326 - MGP_WSBEiJ_P0025084 Gstt2 protein_coding protein_coding MGP_WSBEiJ_T0026886.1 MGP_WSBEiJ_G0017307.1 mouse_genomes_project 10 132426745 132431491 - MGP_WSBEiJ_P0026886 Olfr812 protein_coding protein_coding MGP_WSBEiJ_T0026887.1 MGP_WSBEiJ_G0017307.1 mouse_genomes_project 10 132426745 132427788 - MGP_WSBEiJ_P0026887 Olfr812 protein_coding protein_coding MGP_WSBEiJ_T0000794.1 MGP_WSBEiJ_G0000734.1 mouse_genomes_project 10 87572628 87574971 + TEC TEC MGP_WSBEiJ_T0000795.1 MGP_WSBEiJ_G0000734.1 mouse_genomes_project 10 87573865 87574243 + TEC TEC MGP_WSBEiJ_T0026785.1 MGP_WSBEiJ_G0017251.1 mouse_genomes_project 10 130984373 130999955 - MGP_WSBEiJ_P0026785 Esyt1 protein_coding protein_coding MGP_WSBEiJ_T0026738.1 MGP_WSBEiJ_G0017233.1 mouse_genomes_project 10 130657470 130659357 - MGP_WSBEiJ_P0026738 Spryd4 protein_coding protein_coding MGP_WSBEiJ_T0097651.1 MGP_WSBEiJ_G0036314.1 mouse_genomes_project 10 87653674 87653781 - Gm23191 snRNA snRNA MGP_WSBEiJ_T0003000.1 MGP_WSBEiJ_G0002807.1 mouse_genomes_project 10 86260254 86262143 - A230060F14Rik antisense antisense MGP_WSBEiJ_T0003001.1 MGP_WSBEiJ_G0002807.1 mouse_genomes_project 10 86261593 86262139 - A230060F14Rik antisense antisense MGP_WSBEiJ_T0024591.1 MGP_WSBEiJ_G0016658.1 mouse_genomes_project 10 58618816 58620912 - MGP_WSBEiJ_P0024591 Ddit4 protein_coding protein_coding MGP_WSBEiJ_T0025840.1 MGP_WSBEiJ_G0016961.1 mouse_genomes_project 10 81784749 81790540 + protein_coding processed_transcript MGP_WSBEiJ_T0098874.1 MGP_WSBEiJ_G0037537.1 mouse_genomes_project 10 108384579 108384664 + Gm24745 snoRNA snoRNA MGP_WSBEiJ_T0025335.1 MGP_WSBEiJ_G0016841.1 mouse_genomes_project 10 79532432 79539151 + MGP_WSBEiJ_P0025335 Tpgs1 protein_coding protein_coding MGP_WSBEiJ_T0023748.1 MGP_WSBEiJ_G0016390.1 mouse_genomes_project 10 2671318 2679710 + MGP_WSBEiJ_P0023748 Vip protein_coding protein_coding MGP_WSBEiJ_T0012142.1 MGP_WSBEiJ_G0010272.1 mouse_genomes_project 10 930402 930846 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026223.1 MGP_WSBEiJ_G0017057.1 mouse_genomes_project 10 96078252 96110589 - MGP_WSBEiJ_P0026223 Socs2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026224.1 MGP_WSBEiJ_G0017057.1 mouse_genomes_project 10 96080557 96085843 - Socs2 protein_coding retained_intron MGP_WSBEiJ_T0026225.1 MGP_WSBEiJ_G0017057.1 mouse_genomes_project 10 96081233 96110250 - Socs2 protein_coding processed_transcript MGP_WSBEiJ_T0026226.1 MGP_WSBEiJ_G0017057.1 mouse_genomes_project 10 96094133 96110510 - Socs2 protein_coding processed_transcript MGP_WSBEiJ_T0026227.1 MGP_WSBEiJ_G0017057.1 mouse_genomes_project 10 96106586 96114184 - Socs2 protein_coding processed_transcript MGP_WSBEiJ_T0026228.1 MGP_WSBEiJ_G0017057.1 mouse_genomes_project 10 96110132 96114640 - MGP_WSBEiJ_P0026228 Socs2 protein_coding protein_coding MGP_WSBEiJ_T0026229.1 MGP_WSBEiJ_G0017057.1 mouse_genomes_project 10 96111016 96116025 - Socs2 protein_coding processed_transcript MGP_WSBEiJ_T0026230.1 MGP_WSBEiJ_G0017057.1 mouse_genomes_project 10 96114447 96115356 - Socs2 protein_coding processed_transcript MGP_WSBEiJ_T0098864.1 MGP_WSBEiJ_G0037527.1 mouse_genomes_project 10 77645879 77645933 - Gm22871 snoRNA snoRNA MGP_WSBEiJ_T0023997.1 MGP_WSBEiJ_G0016446.1 mouse_genomes_project 10 16178178 16185002 - MGP_WSBEiJ_P0023997 Gm4922 protein_coding protein_coding MGP_WSBEiJ_T0026531.1 MGP_WSBEiJ_G0017169.1 mouse_genomes_project 10 123768574 123805703 + MGP_WSBEiJ_P0026531 D930020B18Rik protein_coding protein_coding MGP_WSBEiJ_T0026532.1 MGP_WSBEiJ_G0017169.1 mouse_genomes_project 10 123768687 123823038 + MGP_WSBEiJ_P0026532 D930020B18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026533.1 MGP_WSBEiJ_G0017169.1 mouse_genomes_project 10 123768780 123822767 + MGP_WSBEiJ_P0026533 D930020B18Rik protein_coding protein_coding MGP_WSBEiJ_T0026534.1 MGP_WSBEiJ_G0017169.1 mouse_genomes_project 10 123768858 123822767 + MGP_WSBEiJ_P0026534 D930020B18Rik protein_coding protein_coding MGP_WSBEiJ_T0009426.1 MGP_WSBEiJ_G0007583.1 mouse_genomes_project 10 24078184 24078308 - Gm27754 miRNA miRNA MGP_WSBEiJ_T0006037.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92609194 92642023 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006038.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92609200 92609875 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006039.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92609288 92641876 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006040.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92613896 92614403 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006041.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92620490 92704995 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006042.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92620490 92706014 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006043.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92622631 92704913 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006044.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92672173 92706011 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006045.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92673900 92703404 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006046.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92673926 92705174 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006048.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92702367 92702427 - Rmst lincRNA misc_RNA MGP_WSBEiJ_T0006049.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92702367 92703025 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0006050.1 MGP_WSBEiJ_G0005051.1 mouse_genomes_project 10 92702410 92706014 - Rmst lincRNA lincRNA MGP_WSBEiJ_T0026603.1 MGP_WSBEiJ_G0017192.1 mouse_genomes_project 10 129509849 129518781 + MGP_WSBEiJ_P0026603 B4galnt1 protein_coding protein_coding MGP_WSBEiJ_T0026841.1 MGP_WSBEiJ_G0017274.1 mouse_genomes_project 10 131474160 131476945 - MGP_WSBEiJ_P0026841 Mettl7b protein_coding protein_coding MGP_WSBEiJ_T0025561.1 MGP_WSBEiJ_G0016892.1 mouse_genomes_project 10 80336601 80340371 - Uqcr11 protein_coding processed_transcript MGP_WSBEiJ_T0025562.1 MGP_WSBEiJ_G0016892.1 mouse_genomes_project 10 80336601 80340435 - MGP_WSBEiJ_P0025562 Uqcr11 protein_coding protein_coding MGP_WSBEiJ_T0025563.1 MGP_WSBEiJ_G0016892.1 mouse_genomes_project 10 80336602 80340400 - Uqcr11 protein_coding processed_transcript MGP_WSBEiJ_T0025219.1 MGP_WSBEiJ_G0016802.1 mouse_genomes_project 10 77551443 77610771 + MGP_WSBEiJ_P0025219 Tspear protein_coding protein_coding MGP_WSBEiJ_T0025220.1 MGP_WSBEiJ_G0016802.1 mouse_genomes_project 10 77551508 77616091 + MGP_WSBEiJ_P0025220 Tspear protein_coding protein_coding MGP_WSBEiJ_T0025221.1 MGP_WSBEiJ_G0016802.1 mouse_genomes_project 10 77594690 77598072 + Tspear protein_coding retained_intron MGP_WSBEiJ_T0026236.1 MGP_WSBEiJ_G0017063.1 mouse_genomes_project 10 97410140 97416940 + MGP_WSBEiJ_P0026236 Btg1 protein_coding protein_coding MGP_WSBEiJ_T0012166.1 MGP_WSBEiJ_G0010296.1 mouse_genomes_project 10 50861020 50861571 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026529.1 MGP_WSBEiJ_G0017168.1 mouse_genomes_project 10 123713894 123754368 - MGP_WSBEiJ_P0026529 Xpot protein_coding protein_coding MGP_WSBEiJ_T0026530.1 MGP_WSBEiJ_G0017168.1 mouse_genomes_project 10 123717783 123754568 - MGP_WSBEiJ_P0026530 Xpot protein_coding unknown_likely_coding MGP_WSBEiJ_T0026137.1 MGP_WSBEiJ_G0017035.1 mouse_genomes_project 10 93255413 93294054 - MGP_WSBEiJ_P0026137 Nedd1 protein_coding protein_coding MGP_WSBEiJ_T0026844.1 MGP_WSBEiJ_G0017277.1 mouse_genomes_project 10 131678099 131679038 - MGP_WSBEiJ_P0026844 Olfr768 protein_coding protein_coding MGP_WSBEiJ_T0026187.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94556013 94591070 - MGP_WSBEiJ_P0026187 Vezt protein_coding protein_coding MGP_WSBEiJ_T0026188.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94578123 94656459 - MGP_WSBEiJ_P0026188 Vezt protein_coding protein_coding MGP_WSBEiJ_T0026189.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94584706 94656390 - MGP_WSBEiJ_P0026189 Vezt protein_coding protein_coding MGP_WSBEiJ_T0026190.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94587878 94656347 - MGP_WSBEiJ_P0026190 Vezt protein_coding protein_coding MGP_WSBEiJ_T0026191.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94588335 94656384 - MGP_WSBEiJ_P0026191 Vezt protein_coding protein_coding MGP_WSBEiJ_T0026192.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94603621 94617197 - MGP_WSBEiJ_P0026192 Vezt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026193.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94607603 94656419 - MGP_WSBEiJ_P0026193 Vezt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026194.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94613737 94656443 - MGP_WSBEiJ_P0026194 Vezt protein_coding protein_coding MGP_WSBEiJ_T0026195.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94617133 94641321 - MGP_WSBEiJ_P0026195 Vezt protein_coding protein_coding MGP_WSBEiJ_T0026196.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94621994 94656391 - Vezt protein_coding retained_intron MGP_WSBEiJ_T0026197.1 MGP_WSBEiJ_G0017048.1 mouse_genomes_project 10 94624167 94656309 - Vezt protein_coding processed_transcript MGP_WSBEiJ_T0026070.1 MGP_WSBEiJ_G0017027.1 mouse_genomes_project 10 90094195 90142558 - MGP_WSBEiJ_P0026070 Scyl2 protein_coding protein_coding MGP_WSBEiJ_T0026071.1 MGP_WSBEiJ_G0017027.1 mouse_genomes_project 10 90095143 90111020 - Scyl2 protein_coding processed_transcript MGP_WSBEiJ_T0026072.1 MGP_WSBEiJ_G0017027.1 mouse_genomes_project 10 90095426 90142541 - MGP_WSBEiJ_P0026072 Scyl2 protein_coding protein_coding MGP_WSBEiJ_T0026073.1 MGP_WSBEiJ_G0017027.1 mouse_genomes_project 10 90106300 90110724 - Scyl2 protein_coding retained_intron MGP_WSBEiJ_T0026074.1 MGP_WSBEiJ_G0017027.1 mouse_genomes_project 10 90107298 90116694 - MGP_WSBEiJ_P0026074 Scyl2 protein_coding protein_coding MGP_WSBEiJ_T0026075.1 MGP_WSBEiJ_G0017027.1 mouse_genomes_project 10 90123935 90142541 - Scyl2 protein_coding retained_intron MGP_WSBEiJ_T0026076.1 MGP_WSBEiJ_G0017027.1 mouse_genomes_project 10 90131949 90142536 - Scyl2 protein_coding retained_intron MGP_WSBEiJ_T0023709.1 MGP_WSBEiJ_G0016381.1 mouse_genomes_project 10 1357273 1380222 - MGP_WSBEiJ_P0023709 Zbtb2 protein_coding protein_coding MGP_WSBEiJ_T0023710.1 MGP_WSBEiJ_G0016381.1 mouse_genomes_project 10 1357674 1379576 - MGP_WSBEiJ_P0023710 Zbtb2 protein_coding protein_coding MGP_WSBEiJ_T0009471.1 MGP_WSBEiJ_G0007628.1 mouse_genomes_project 10 95234396 95234459 - Mir7211 miRNA miRNA MGP_WSBEiJ_T0026691.1 MGP_WSBEiJ_G0017217.1 mouse_genomes_project 10 130130366 130139504 + MGP_WSBEiJ_P0026691 Zbtb39 protein_coding protein_coding MGP_WSBEiJ_T0026815.1 MGP_WSBEiJ_G0017262.1 mouse_genomes_project 10 131215696 131241225 - MGP_WSBEiJ_P0026815 Dgka protein_coding protein_coding MGP_WSBEiJ_T0025609.1 MGP_WSBEiJ_G0016905.1 mouse_genomes_project 10 80674287 80676977 + MGP_WSBEiJ_P0025609 Izumo4 protein_coding protein_coding MGP_WSBEiJ_T0025696.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81262538 81273910 + MGP_WSBEiJ_P0025696 Matk protein_coding protein_coding MGP_WSBEiJ_T0025697.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81268223 81274290 + MGP_WSBEiJ_P0025697 Matk protein_coding protein_coding MGP_WSBEiJ_T0025698.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81268223 81274290 + MGP_WSBEiJ_P0025698 Matk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025699.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81268223 81273906 + MGP_WSBEiJ_P0025699 Matk protein_coding protein_coding MGP_WSBEiJ_T0025700.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81268229 81273906 + MGP_WSBEiJ_P0025700 Matk protein_coding protein_coding MGP_WSBEiJ_T0025701.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81268266 81273910 + Matk protein_coding retained_intron MGP_WSBEiJ_T0025702.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81268372 81271451 + Matk protein_coding retained_intron MGP_WSBEiJ_T0025703.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81268754 81270578 + MGP_WSBEiJ_P0025703 Matk protein_coding protein_coding MGP_WSBEiJ_T0025704.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81268842 81273900 + MGP_WSBEiJ_P0025704 Matk protein_coding protein_coding MGP_WSBEiJ_T0025705.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81269139 81273838 + Matk protein_coding retained_intron MGP_WSBEiJ_T0025706.1 MGP_WSBEiJ_G0016935.1 mouse_genomes_project 10 81272094 81273592 + Matk protein_coding retained_intron MGP_WSBEiJ_T0025682.1 MGP_WSBEiJ_G0016929.1 mouse_genomes_project 10 81174133 81182171 + MGP_WSBEiJ_P0025682 Eef2 protein_coding protein_coding MGP_WSBEiJ_T0011078.1 MGP_WSBEiJ_G0009235.1 mouse_genomes_project 10 69809638 69809950 - Gm22320 misc_RNA misc_RNA MGP_WSBEiJ_T0026167.1 MGP_WSBEiJ_G0017043.1 mouse_genomes_project 10 94189854 94195954 - MGP_WSBEiJ_P0026167 Snrpf protein_coding unknown_likely_coding MGP_WSBEiJ_T0023883.1 MGP_WSBEiJ_G0016419.1 mouse_genomes_project 10 8488238 8611815 + MGP_WSBEiJ_P0023883 Epm2a protein_coding protein_coding MGP_WSBEiJ_T0023884.1 MGP_WSBEiJ_G0016419.1 mouse_genomes_project 10 8488287 8600873 + Epm2a protein_coding processed_transcript MGP_WSBEiJ_T0025073.1 MGP_WSBEiJ_G0016758.1 mouse_genomes_project 10 75320744 75330333 - MGP_WSBEiJ_P0025073 Gm20441 protein_coding protein_coding MGP_WSBEiJ_T0025187.1 MGP_WSBEiJ_G0016792.1 mouse_genomes_project 10 77209713 77246333 + MGP_WSBEiJ_P0025187 Itgb2 protein_coding protein_coding MGP_WSBEiJ_T0025188.1 MGP_WSBEiJ_G0016792.1 mouse_genomes_project 10 77209808 77227932 + MGP_WSBEiJ_P0025188 Itgb2 protein_coding protein_coding MGP_WSBEiJ_T0025189.1 MGP_WSBEiJ_G0016792.1 mouse_genomes_project 10 77209831 77229404 + MGP_WSBEiJ_P0025189 Itgb2 protein_coding protein_coding MGP_WSBEiJ_T0025190.1 MGP_WSBEiJ_G0016792.1 mouse_genomes_project 10 77209835 77246269 + MGP_WSBEiJ_P0025190 Itgb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025191.1 MGP_WSBEiJ_G0016792.1 mouse_genomes_project 10 77209841 77246355 + MGP_WSBEiJ_P0025191 Itgb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026902.1 MGP_WSBEiJ_G0017318.1 mouse_genomes_project 10 132846343 132847401 - MGP_WSBEiJ_P0026902 Olfr827 protein_coding protein_coding MGP_WSBEiJ_T0009429.1 MGP_WSBEiJ_G0007586.1 mouse_genomes_project 10 42905269 42905362 + Mir1929 miRNA miRNA MGP_WSBEiJ_T0097617.1 MGP_WSBEiJ_G0036280.1 mouse_genomes_project 10 20763423 20763530 - Gm24655 snRNA snRNA MGP_WSBEiJ_T0026875.1 MGP_WSBEiJ_G0017299.1 mouse_genomes_project 10 132213700 132214636 + MGP_WSBEiJ_P0026875 Olfr799 protein_coding protein_coding MGP_WSBEiJ_T0000792.1 MGP_WSBEiJ_G0000732.1 mouse_genomes_project 10 80455167 80456022 + TEC TEC MGP_WSBEiJ_T0025683.1 MGP_WSBEiJ_G0016930.1 mouse_genomes_project 10 81182268 81183482 - MGP_WSBEiJ_P0025683 4930442H23Rik protein_coding protein_coding MGP_WSBEiJ_T0026479.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121441301 122126334 + MGP_WSBEiJ_P0026479 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026480.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121443071 122114992 + MGP_WSBEiJ_P0026480 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026481.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121443077 122116535 + MGP_WSBEiJ_P0026481 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026482.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121716355 122116534 + MGP_WSBEiJ_P0026482 Grip1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026483.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121840983 122116535 + MGP_WSBEiJ_P0026483 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026484.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121840992 122115911 + MGP_WSBEiJ_P0026484 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026485.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121841099 122045694 + Grip1 protein_coding retained_intron MGP_WSBEiJ_T0026486.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121841106 122114992 + MGP_WSBEiJ_P0026486 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026487.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121841106 122114992 + MGP_WSBEiJ_P0026487 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026488.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121841109 122114912 + MGP_WSBEiJ_P0026488 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026489.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121841119 122126133 + MGP_WSBEiJ_P0026489 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026490.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121874799 122116530 + Grip1 protein_coding retained_intron MGP_WSBEiJ_T0026491.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 121937949 122114912 + Grip1 protein_coding processed_transcript MGP_WSBEiJ_T0026492.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 122026848 122126335 + MGP_WSBEiJ_P0026492 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026493.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 122027050 122116406 + MGP_WSBEiJ_P0026493 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026494.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 122027198 122115188 + MGP_WSBEiJ_P0026494 Grip1 protein_coding protein_coding MGP_WSBEiJ_T0026495.1 MGP_WSBEiJ_G0017154.1 mouse_genomes_project 10 122027234 122126334 + MGP_WSBEiJ_P0026495 Grip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0011085.1 MGP_WSBEiJ_G0009242.1 mouse_genomes_project 10 92641793 92641996 - Gm27753 misc_RNA misc_RNA MGP_WSBEiJ_T0026399.1 MGP_WSBEiJ_G0017126.1 mouse_genomes_project 10 117254845 117267764 + MGP_WSBEiJ_P0026399 A930009A15Rik protein_coding protein_coding MGP_WSBEiJ_T0025758.1 MGP_WSBEiJ_G0016948.1 mouse_genomes_project 10 81415948 81417749 + MGP_WSBEiJ_P0025758 Smim24 protein_coding protein_coding MGP_WSBEiJ_T0025759.1 MGP_WSBEiJ_G0016948.1 mouse_genomes_project 10 81416506 81417994 + Smim24 protein_coding processed_transcript MGP_WSBEiJ_T0025516.1 MGP_WSBEiJ_G0016882.1 mouse_genomes_project 10 80179450 80201369 + MGP_WSBEiJ_P0025516 Dazap1 protein_coding protein_coding MGP_WSBEiJ_T0025517.1 MGP_WSBEiJ_G0016882.1 mouse_genomes_project 10 80185301 80209776 + MGP_WSBEiJ_P0025517 Dazap1 protein_coding protein_coding MGP_WSBEiJ_T0025518.1 MGP_WSBEiJ_G0016882.1 mouse_genomes_project 10 80185333 80209261 + MGP_WSBEiJ_P0025518 Dazap1 protein_coding protein_coding MGP_WSBEiJ_T0025519.1 MGP_WSBEiJ_G0016882.1 mouse_genomes_project 10 80185391 80209776 + MGP_WSBEiJ_P0025519 Dazap1 protein_coding protein_coding MGP_WSBEiJ_T0025520.1 MGP_WSBEiJ_G0016882.1 mouse_genomes_project 10 80185441 80198735 + Dazap1 protein_coding processed_transcript MGP_WSBEiJ_T0025521.1 MGP_WSBEiJ_G0016882.1 mouse_genomes_project 10 80200786 80206956 + Dazap1 protein_coding retained_intron MGP_WSBEiJ_T0025522.1 MGP_WSBEiJ_G0016882.1 mouse_genomes_project 10 80203230 80204881 + Dazap1 protein_coding retained_intron MGP_WSBEiJ_T0024388.1 MGP_WSBEiJ_G0016588.1 mouse_genomes_project 10 41013054 41033678 - MGP_WSBEiJ_P0024388 Nr2e1 protein_coding protein_coding MGP_WSBEiJ_T0024389.1 MGP_WSBEiJ_G0016588.1 mouse_genomes_project 10 41014346 41019897 - MGP_WSBEiJ_P0024389 Nr2e1 protein_coding protein_coding MGP_WSBEiJ_T0024390.1 MGP_WSBEiJ_G0016588.1 mouse_genomes_project 10 41022547 41031159 - MGP_WSBEiJ_P0024390 Nr2e1 protein_coding protein_coding MGP_WSBEiJ_T0026209.1 MGP_WSBEiJ_G0017052.1 mouse_genomes_project 10 94923276 94928255 - MGP_WSBEiJ_P0026209 Gm4792 protein_coding protein_coding MGP_WSBEiJ_T0026210.1 MGP_WSBEiJ_G0017052.1 mouse_genomes_project 10 94926594 94928159 - Gm4792 protein_coding retained_intron MGP_WSBEiJ_T0025294.1 MGP_WSBEiJ_G0016824.1 mouse_genomes_project 10 78627115 78628078 - MGP_WSBEiJ_P0025294 Olfr1356 protein_coding protein_coding MGP_WSBEiJ_T0025295.1 MGP_WSBEiJ_G0016824.1 mouse_genomes_project 10 78627115 78632329 - MGP_WSBEiJ_P0025295 Olfr1356 protein_coding protein_coding MGP_WSBEiJ_T0025624.1 MGP_WSBEiJ_G0016911.1 mouse_genomes_project 10 80785344 80788724 - MGP_WSBEiJ_P0025624 Jsrp1 protein_coding protein_coding MGP_WSBEiJ_T0025625.1 MGP_WSBEiJ_G0016911.1 mouse_genomes_project 10 80785346 80790329 - MGP_WSBEiJ_P0025625 Jsrp1 protein_coding protein_coding MGP_WSBEiJ_T0025626.1 MGP_WSBEiJ_G0016911.1 mouse_genomes_project 10 80785349 80790332 - MGP_WSBEiJ_P0025626 Jsrp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025627.1 MGP_WSBEiJ_G0016911.1 mouse_genomes_project 10 80787029 80790335 - MGP_WSBEiJ_P0025627 Jsrp1 protein_coding protein_coding MGP_WSBEiJ_T0025580.1 MGP_WSBEiJ_G0016896.1 mouse_genomes_project 10 80492738 80497696 - Rexo1 protein_coding retained_intron MGP_WSBEiJ_T0025581.1 MGP_WSBEiJ_G0016896.1 mouse_genomes_project 10 80492741 80515159 - MGP_WSBEiJ_P0025581 Rexo1 protein_coding protein_coding MGP_WSBEiJ_T0025582.1 MGP_WSBEiJ_G0016896.1 mouse_genomes_project 10 80493480 80499781 - MGP_WSBEiJ_P0025582 Rexo1 protein_coding protein_coding MGP_WSBEiJ_T0025583.1 MGP_WSBEiJ_G0016896.1 mouse_genomes_project 10 80494089 80498662 - Rexo1 protein_coding retained_intron MGP_WSBEiJ_T0025584.1 MGP_WSBEiJ_G0016896.1 mouse_genomes_project 10 80494089 80498330 - Rexo1 protein_coding retained_intron MGP_WSBEiJ_T0025585.1 MGP_WSBEiJ_G0016896.1 mouse_genomes_project 10 80494432 80496130 - MGP_WSBEiJ_P0025585 Rexo1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025586.1 MGP_WSBEiJ_G0016896.1 mouse_genomes_project 10 80497856 80501322 - MGP_WSBEiJ_P0025586 Rexo1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025587.1 MGP_WSBEiJ_G0016896.1 mouse_genomes_project 10 80499186 80501320 - Rexo1 protein_coding processed_transcript MGP_WSBEiJ_T0024738.1 MGP_WSBEiJ_G0016695.1 mouse_genomes_project 10 61328560 61362321 - MGP_WSBEiJ_P0024738 Vps26a protein_coding protein_coding MGP_WSBEiJ_T0024739.1 MGP_WSBEiJ_G0016695.1 mouse_genomes_project 10 61328560 61362528 - MGP_WSBEiJ_P0024739 Vps26a protein_coding protein_coding MGP_WSBEiJ_T0009494.1 MGP_WSBEiJ_G0007651.1 mouse_genomes_project 10 130854530 130854599 + Mir6915 miRNA miRNA MGP_WSBEiJ_T0026527.1 MGP_WSBEiJ_G0017166.1 mouse_genomes_project 10 123530614 123599204 - MGP_WSBEiJ_P0026527 Rassf3 protein_coding protein_coding MGP_WSBEiJ_T0006005.1 MGP_WSBEiJ_G0005026.1 mouse_genomes_project 10 59681292 59690976 - Pldi lincRNA lincRNA MGP_WSBEiJ_T0012175.1 MGP_WSBEiJ_G0010305.1 mouse_genomes_project 10 61867882 61868508 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012191.1 MGP_WSBEiJ_G0010321.1 mouse_genomes_project 10 97249358 97250267 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024358.1 MGP_WSBEiJ_G0016581.1 mouse_genomes_project 10 40074733 40125117 - MGP_WSBEiJ_P0024358 protein_coding protein_coding MGP_WSBEiJ_T0097657.1 MGP_WSBEiJ_G0036320.1 mouse_genomes_project 10 105431559 105431621 - Gm22339 snRNA snRNA MGP_WSBEiJ_T0009467.1 MGP_WSBEiJ_G0007624.1 mouse_genomes_project 10 92676769 92676853 - Mir1251 miRNA miRNA MGP_WSBEiJ_T0002986.1 MGP_WSBEiJ_G0002797.1 mouse_genomes_project 10 80299962 80301224 + Gm15124 antisense antisense MGP_WSBEiJ_T0006004.1 MGP_WSBEiJ_G0005025.1 mouse_genomes_project 10 56360721 56368701 - 4930467K11Rik lincRNA lincRNA MGP_WSBEiJ_T0024509.1 MGP_WSBEiJ_G0016634.1 mouse_genomes_project 10 55229932 55242834 + MGP_WSBEiJ_P0024509 Gja1 protein_coding protein_coding MGP_WSBEiJ_T0024227.1 MGP_WSBEiJ_G0016538.1 mouse_genomes_project 10 32143374 32145278 - MGP_WSBEiJ_P0024227 Fam26f protein_coding protein_coding MGP_WSBEiJ_T0025877.1 MGP_WSBEiJ_G0016974.1 mouse_genomes_project 10 83141806 83363307 + MGP_WSBEiJ_P0025877 Chst11 protein_coding protein_coding MGP_WSBEiJ_T0009498.1 MGP_WSBEiJ_G0007655.1 mouse_genomes_project 10 131036282 131036401 - miRNA miRNA MGP_WSBEiJ_T0024101.1 MGP_WSBEiJ_G0016484.1 mouse_genomes_project 10 21577542 21578556 + MGP_WSBEiJ_P0024101 Taar5 protein_coding protein_coding MGP_WSBEiJ_T0011083.1 MGP_WSBEiJ_G0009240.1 mouse_genomes_project 10 92614264 92614426 - Gm27608 misc_RNA misc_RNA MGP_WSBEiJ_T0026079.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 90342059 91461441 + MGP_WSBEiJ_P0026079 protein_coding protein_coding MGP_WSBEiJ_T0026080.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 90342088 90983635 + MGP_WSBEiJ_P0026080 protein_coding protein_coding MGP_WSBEiJ_T0026081.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 90342188 91457614 + MGP_WSBEiJ_P0026081 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026082.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 90342222 91160947 + MGP_WSBEiJ_P0026082 protein_coding protein_coding MGP_WSBEiJ_T0026083.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 90455096 90494906 + protein_coding processed_transcript MGP_WSBEiJ_T0026084.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 90510603 90533133 + protein_coding processed_transcript MGP_WSBEiJ_T0026085.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 90533165 90541493 + MGP_WSBEiJ_P0026085 protein_coding protein_coding MGP_WSBEiJ_T0026086.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91052464 91465332 + MGP_WSBEiJ_P0026086 protein_coding protein_coding MGP_WSBEiJ_T0026087.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91052982 91409505 + MGP_WSBEiJ_P0026087 protein_coding protein_coding MGP_WSBEiJ_T0026088.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053107 91461480 + MGP_WSBEiJ_P0026088 protein_coding protein_coding MGP_WSBEiJ_T0026089.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053245 91463491 + MGP_WSBEiJ_P0026089 protein_coding protein_coding MGP_WSBEiJ_T0026090.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053297 91463734 + MGP_WSBEiJ_P0026090 protein_coding protein_coding MGP_WSBEiJ_T0026091.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053339 91461434 + MGP_WSBEiJ_P0026091 protein_coding protein_coding MGP_WSBEiJ_T0026092.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053418 91462086 + MGP_WSBEiJ_P0026092 protein_coding protein_coding MGP_WSBEiJ_T0026093.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053445 91463696 + MGP_WSBEiJ_P0026093 protein_coding protein_coding MGP_WSBEiJ_T0026094.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053463 91463734 + MGP_WSBEiJ_P0026094 protein_coding protein_coding MGP_WSBEiJ_T0026095.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053476 91077178 + protein_coding processed_transcript MGP_WSBEiJ_T0026096.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053477 91064396 + MGP_WSBEiJ_P0026096 protein_coding protein_coding MGP_WSBEiJ_T0026097.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053493 91064543 + MGP_WSBEiJ_P0026097 protein_coding protein_coding MGP_WSBEiJ_T0026098.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053528 91462201 + MGP_WSBEiJ_P0026098 protein_coding protein_coding MGP_WSBEiJ_T0026099.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053542 91464023 + MGP_WSBEiJ_P0026099 protein_coding protein_coding MGP_WSBEiJ_T0026100.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053692 91461441 + MGP_WSBEiJ_P0026100 protein_coding protein_coding MGP_WSBEiJ_T0026101.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91053719 91461042 + MGP_WSBEiJ_P0026101 protein_coding protein_coding MGP_WSBEiJ_T0026102.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91312780 91385783 + protein_coding processed_transcript MGP_WSBEiJ_T0026103.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91313817 91461434 + MGP_WSBEiJ_P0026103 protein_coding protein_coding MGP_WSBEiJ_T0026104.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91313949 91463489 + MGP_WSBEiJ_P0026104 protein_coding protein_coding MGP_WSBEiJ_T0026105.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91314169 91463316 + MGP_WSBEiJ_P0026105 protein_coding protein_coding MGP_WSBEiJ_T0026106.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91314207 91403198 + protein_coding processed_transcript MGP_WSBEiJ_T0026107.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91314231 91409530 + protein_coding processed_transcript MGP_WSBEiJ_T0026108.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91383552 91415007 + MGP_WSBEiJ_P0026108 protein_coding protein_coding MGP_WSBEiJ_T0026109.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91383563 91463489 + MGP_WSBEiJ_P0026109 protein_coding protein_coding MGP_WSBEiJ_T0026110.1 MGP_WSBEiJ_G0017030.1 mouse_genomes_project 10 91383643 91461314 + MGP_WSBEiJ_P0026110 protein_coding protein_coding MGP_WSBEiJ_T0026826.1 MGP_WSBEiJ_G0017270.1 mouse_genomes_project 10 131423579 131427458 + MGP_WSBEiJ_P0026826 Cd63 protein_coding protein_coding MGP_WSBEiJ_T0026827.1 MGP_WSBEiJ_G0017270.1 mouse_genomes_project 10 131424527 131427458 + MGP_WSBEiJ_P0026827 Cd63 protein_coding protein_coding MGP_WSBEiJ_T0024320.1 MGP_WSBEiJ_G0016574.1 mouse_genomes_project 10 39866733 39881997 + MGP_WSBEiJ_P0024320 Zbtb24 protein_coding protein_coding MGP_WSBEiJ_T0026001.1 MGP_WSBEiJ_G0017010.1 mouse_genomes_project 10 88399434 88400738 + MGP_WSBEiJ_P0026001 Pmch protein_coding protein_coding MGP_WSBEiJ_T0026893.1 MGP_WSBEiJ_G0017311.1 mouse_genomes_project 10 132629626 132630687 + MGP_WSBEiJ_P0026893 Olfr820 protein_coding protein_coding MGP_WSBEiJ_T0000801.1 MGP_WSBEiJ_G0000740.1 mouse_genomes_project 10 113275495 113275792 + TEC TEC MGP_WSBEiJ_T0024073.1 MGP_WSBEiJ_G0016469.1 mouse_genomes_project 10 19611551 19612046 - protein_coding processed_transcript MGP_WSBEiJ_T0026499.1 MGP_WSBEiJ_G0017156.1 mouse_genomes_project 10 122184924 122249664 - MGP_WSBEiJ_P0026499 Irak3 protein_coding protein_coding MGP_WSBEiJ_T0026500.1 MGP_WSBEiJ_G0017156.1 mouse_genomes_project 10 122185445 122249703 - MGP_WSBEiJ_P0026500 Irak3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026501.1 MGP_WSBEiJ_G0017156.1 mouse_genomes_project 10 122204066 122216780 - Irak3 protein_coding processed_transcript MGP_WSBEiJ_T0026502.1 MGP_WSBEiJ_G0017156.1 mouse_genomes_project 10 122208816 122249792 - Irak3 protein_coding retained_intron MGP_WSBEiJ_T0012173.1 MGP_WSBEiJ_G0010303.1 mouse_genomes_project 10 60100976 60101364 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026403.1 MGP_WSBEiJ_G0017128.1 mouse_genomes_project 10 117759750 118016600 + MGP_WSBEiJ_P0026403 Ptprr protein_coding protein_coding MGP_WSBEiJ_T0026404.1 MGP_WSBEiJ_G0017128.1 mouse_genomes_project 10 117759827 117852491 + Ptprr protein_coding processed_transcript MGP_WSBEiJ_T0026406.1 MGP_WSBEiJ_G0017128.1 mouse_genomes_project 10 117882284 118016598 + MGP_WSBEiJ_P0026406 Ptprr protein_coding protein_coding MGP_WSBEiJ_T0026407.1 MGP_WSBEiJ_G0017128.1 mouse_genomes_project 10 117909234 118016600 + MGP_WSBEiJ_P0026407 Ptprr protein_coding protein_coding MGP_WSBEiJ_T0026408.1 MGP_WSBEiJ_G0017128.1 mouse_genomes_project 10 117909327 118016600 + MGP_WSBEiJ_P0026408 Ptprr protein_coding protein_coding MGP_WSBEiJ_T0026409.1 MGP_WSBEiJ_G0017128.1 mouse_genomes_project 10 117909387 118016013 + MGP_WSBEiJ_P0026409 Ptprr protein_coding protein_coding MGP_WSBEiJ_T0026410.1 MGP_WSBEiJ_G0017128.1 mouse_genomes_project 10 117928327 117977543 + Ptprr protein_coding processed_transcript MGP_WSBEiJ_T0026589.1 MGP_WSBEiJ_G0017187.1 mouse_genomes_project 10 129391790 129396934 - MGP_WSBEiJ_P0026589 March9 protein_coding protein_coding MGP_WSBEiJ_T0023866.1 MGP_WSBEiJ_G0016415.1 mouse_genomes_project 10 7794196 7794707 + MGP_WSBEiJ_P0023866 Gm10944 protein_coding protein_coding MGP_WSBEiJ_T0005996.1 MGP_WSBEiJ_G0005017.1 mouse_genomes_project 10 22102247 22107415 + Gm15271 lincRNA lincRNA MGP_WSBEiJ_T0025721.1 MGP_WSBEiJ_G0016940.1 mouse_genomes_project 10 81335184 81340333 + MGP_WSBEiJ_P0025721 Cactin protein_coding protein_coding MGP_WSBEiJ_T0026699.1 MGP_WSBEiJ_G0017223.1 mouse_genomes_project 10 130308864 130314276 - MGP_WSBEiJ_P0026699 Rdh7 protein_coding protein_coding MGP_WSBEiJ_T0026700.1 MGP_WSBEiJ_G0017223.1 mouse_genomes_project 10 130312165 130313789 - Rdh7 protein_coding processed_transcript MGP_WSBEiJ_T0003019.1 MGP_WSBEiJ_G0002820.1 mouse_genomes_project 10 116449270 116464775 + Gm15723 antisense antisense MGP_WSBEiJ_T0025946.1 MGP_WSBEiJ_G0016996.1 mouse_genomes_project 10 86192563 86251722 - MGP_WSBEiJ_P0025946 Bpifc protein_coding protein_coding MGP_WSBEiJ_T0025947.1 MGP_WSBEiJ_G0016996.1 mouse_genomes_project 10 86230572 86251683 - MGP_WSBEiJ_P0025947 Bpifc protein_coding protein_coding MGP_WSBEiJ_T0026613.1 MGP_WSBEiJ_G0017196.1 mouse_genomes_project 10 129544447 129558991 - MGP_WSBEiJ_P0026613 Pip4k2c protein_coding protein_coding MGP_WSBEiJ_T0098842.1 MGP_WSBEiJ_G0037505.1 mouse_genomes_project 10 27217669 27217797 + Gm24286 snoRNA snoRNA MGP_WSBEiJ_T0026903.1 MGP_WSBEiJ_G0017319.1 mouse_genomes_project 10 132902854 132915447 - MGP_WSBEiJ_P0026903 Neurod4 protein_coding protein_coding MGP_WSBEiJ_T0097648.1 MGP_WSBEiJ_G0036311.1 mouse_genomes_project 10 84794491 84794586 + Gm25657 snRNA snRNA MGP_WSBEiJ_T0024086.1 MGP_WSBEiJ_G0016475.1 mouse_genomes_project 10 20700445 20952626 - MGP_WSBEiJ_P0024086 Eya4 protein_coding protein_coding MGP_WSBEiJ_T0024087.1 MGP_WSBEiJ_G0016475.1 mouse_genomes_project 10 20701040 20952618 - MGP_WSBEiJ_P0024087 Eya4 protein_coding protein_coding MGP_WSBEiJ_T0024439.1 MGP_WSBEiJ_G0016605.1 mouse_genomes_project 10 43862845 43891274 + MGP_WSBEiJ_P0024439 Popdc3 protein_coding protein_coding MGP_WSBEiJ_T0024440.1 MGP_WSBEiJ_G0016605.1 mouse_genomes_project 10 43862942 43890939 + MGP_WSBEiJ_P0024440 Popdc3 protein_coding protein_coding MGP_WSBEiJ_T0026573.1 MGP_WSBEiJ_G0017183.1 mouse_genomes_project 10 129343263 129366286 - MGP_WSBEiJ_P0026573 Tsfm protein_coding protein_coding MGP_WSBEiJ_T0026574.1 MGP_WSBEiJ_G0017183.1 mouse_genomes_project 10 129357831 129366323 - MGP_WSBEiJ_P0026574 Tsfm protein_coding protein_coding MGP_WSBEiJ_T0026575.1 MGP_WSBEiJ_G0017183.1 mouse_genomes_project 10 129357944 129360595 - Tsfm protein_coding retained_intron MGP_WSBEiJ_T0026576.1 MGP_WSBEiJ_G0017183.1 mouse_genomes_project 10 129358122 129365875 - Tsfm protein_coding processed_transcript MGP_WSBEiJ_T0026577.1 MGP_WSBEiJ_G0017183.1 mouse_genomes_project 10 129358404 129366242 - Tsfm protein_coding retained_intron MGP_WSBEiJ_T0026578.1 MGP_WSBEiJ_G0017183.1 mouse_genomes_project 10 129359731 129366282 - MGP_WSBEiJ_P0026578 Tsfm protein_coding protein_coding MGP_WSBEiJ_T0026579.1 MGP_WSBEiJ_G0017183.1 mouse_genomes_project 10 129364722 129366286 - Tsfm protein_coding retained_intron MGP_WSBEiJ_T0025608.1 MGP_WSBEiJ_G0016904.1 mouse_genomes_project 10 80655216 80671785 - MGP_WSBEiJ_P0025608 Mob3a protein_coding protein_coding MGP_WSBEiJ_T0097163.1 MGP_WSBEiJ_G0035844.1 mouse_genomes_project 10 26736361 26736515 - Gm22811 ribozyme ribozyme MGP_WSBEiJ_T0005987.1 MGP_WSBEiJ_G0005011.1 mouse_genomes_project 10 15598541 15602742 + lincRNA lincRNA MGP_WSBEiJ_T0024041.1 MGP_WSBEiJ_G0016460.1 mouse_genomes_project 10 17782808 17798046 + MGP_WSBEiJ_P0024041 Mtfr2 protein_coding protein_coding MGP_WSBEiJ_T0025360.1 MGP_WSBEiJ_G0016849.1 mouse_genomes_project 10 79647636 79652790 + MGP_WSBEiJ_P0025360 Fstl3 protein_coding protein_coding MGP_WSBEiJ_T0025361.1 MGP_WSBEiJ_G0016849.1 mouse_genomes_project 10 79647656 79649253 + Fstl3 protein_coding retained_intron MGP_WSBEiJ_T0025362.1 MGP_WSBEiJ_G0016849.1 mouse_genomes_project 10 79650740 79652767 + Fstl3 protein_coding processed_transcript MGP_WSBEiJ_T0024672.1 MGP_WSBEiJ_G0016680.1 mouse_genomes_project 10 60461013 60488441 + MGP_WSBEiJ_P0024672 Ppa1 protein_coding protein_coding MGP_WSBEiJ_T0024673.1 MGP_WSBEiJ_G0016680.1 mouse_genomes_project 10 60461082 60465049 + Ppa1 protein_coding retained_intron MGP_WSBEiJ_T0024674.1 MGP_WSBEiJ_G0016680.1 mouse_genomes_project 10 60475757 60478487 + Ppa1 protein_coding processed_transcript MGP_WSBEiJ_T0024675.1 MGP_WSBEiJ_G0016680.1 mouse_genomes_project 10 60476766 60478666 + Ppa1 protein_coding retained_intron MGP_WSBEiJ_T0100451.1 MGP_WSBEiJ_G0038910.1 mouse_genomes_project 10 106422884 106423043 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0025459.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80029521 80036462 - MGP_WSBEiJ_P0025459 Cbarp protein_coding protein_coding MGP_WSBEiJ_T0025460.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80029521 80036462 - MGP_WSBEiJ_P0025460 Cbarp protein_coding protein_coding MGP_WSBEiJ_T0025461.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80029621 80041474 - MGP_WSBEiJ_P0025461 Cbarp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025462.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80029621 80041474 - MGP_WSBEiJ_P0025462 Cbarp protein_coding protein_coding MGP_WSBEiJ_T0025463.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80031606 80033752 - Cbarp protein_coding retained_intron MGP_WSBEiJ_T0025464.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80032144 80034659 - Cbarp protein_coding retained_intron MGP_WSBEiJ_T0025465.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80034188 80041472 - MGP_WSBEiJ_P0025465 Cbarp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025466.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80034228 80041287 - MGP_WSBEiJ_P0025466 Cbarp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025467.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80034586 80036994 - Cbarp protein_coding processed_transcript MGP_WSBEiJ_T0025468.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80035719 80036981 - Cbarp protein_coding processed_transcript MGP_WSBEiJ_T0025469.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80035737 80036427 - Cbarp protein_coding processed_transcript MGP_WSBEiJ_T0025470.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80035782 80036749 - Cbarp protein_coding retained_intron MGP_WSBEiJ_T0025471.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80035948 80036669 - Cbarp protein_coding retained_intron MGP_WSBEiJ_T0025472.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80036421 80040725 - Cbarp protein_coding processed_transcript MGP_WSBEiJ_T0025473.1 MGP_WSBEiJ_G0016873.1 mouse_genomes_project 10 80036421 80045082 - MGP_WSBEiJ_P0025473 Cbarp protein_coding protein_coding MGP_WSBEiJ_T0024301.1 MGP_WSBEiJ_G0016562.1 mouse_genomes_project 10 38543313 38571300 - MGP_WSBEiJ_P0024301 Rpf2 protein_coding protein_coding MGP_WSBEiJ_T0024302.1 MGP_WSBEiJ_G0016562.1 mouse_genomes_project 10 38543494 38571334 - MGP_WSBEiJ_P0024302 Rpf2 protein_coding protein_coding MGP_WSBEiJ_T0024303.1 MGP_WSBEiJ_G0016562.1 mouse_genomes_project 10 38543750 38547865 - Rpf2 protein_coding processed_transcript MGP_WSBEiJ_T0024304.1 MGP_WSBEiJ_G0016562.1 mouse_genomes_project 10 38543880 38571301 - MGP_WSBEiJ_P0024304 Rpf2 protein_coding protein_coding MGP_WSBEiJ_T0011073.1 MGP_WSBEiJ_G0009230.1 mouse_genomes_project 10 39269775 39270018 - Gm22948 misc_RNA misc_RNA MGP_WSBEiJ_T0024106.1 MGP_WSBEiJ_G0016489.1 mouse_genomes_project 10 21660422 21664415 + MGP_WSBEiJ_P0024106 protein_coding protein_coding MGP_WSBEiJ_T0025306.1 MGP_WSBEiJ_G0016830.1 mouse_genomes_project 10 78830999 78832077 + MGP_WSBEiJ_P0025306 Olfr57 protein_coding protein_coding MGP_WSBEiJ_T0026845.1 MGP_WSBEiJ_G0017278.1 mouse_genomes_project 10 131696477 131697561 - MGP_WSBEiJ_P0026845 Olfr769 protein_coding protein_coding MGP_WSBEiJ_T0025537.1 MGP_WSBEiJ_G0016887.1 mouse_genomes_project 10 80253820 80260307 + MGP_WSBEiJ_P0025537 Reep6 protein_coding protein_coding MGP_WSBEiJ_T0025538.1 MGP_WSBEiJ_G0016887.1 mouse_genomes_project 10 80253820 80260307 + MGP_WSBEiJ_P0025538 Reep6 protein_coding protein_coding MGP_WSBEiJ_T0025539.1 MGP_WSBEiJ_G0016887.1 mouse_genomes_project 10 80254012 80260306 + MGP_WSBEiJ_P0025539 Reep6 protein_coding protein_coding MGP_WSBEiJ_T0025540.1 MGP_WSBEiJ_G0016887.1 mouse_genomes_project 10 80254065 80258304 + Reep6 protein_coding retained_intron MGP_WSBEiJ_T0025541.1 MGP_WSBEiJ_G0016887.1 mouse_genomes_project 10 80254069 80259448 + MGP_WSBEiJ_P0025541 Reep6 protein_coding protein_coding MGP_WSBEiJ_T0025604.1 MGP_WSBEiJ_G0016903.1 mouse_genomes_project 10 80633456 80644401 - MGP_WSBEiJ_P0025604 Mknk2 protein_coding protein_coding MGP_WSBEiJ_T0025605.1 MGP_WSBEiJ_G0016903.1 mouse_genomes_project 10 80638062 80640428 - MGP_WSBEiJ_P0025605 Mknk2 protein_coding protein_coding MGP_WSBEiJ_T0025606.1 MGP_WSBEiJ_G0016903.1 mouse_genomes_project 10 80639746 80640388 - MGP_WSBEiJ_P0025606 Mknk2 protein_coding protein_coding MGP_WSBEiJ_T0025607.1 MGP_WSBEiJ_G0016903.1 mouse_genomes_project 10 80640082 80646227 - MGP_WSBEiJ_P0025607 Mknk2 protein_coding protein_coding MGP_WSBEiJ_T0003036.1 MGP_WSBEiJ_G0002832.1 mouse_genomes_project 10 130058830 130063939 - Gm16230 antisense antisense MGP_WSBEiJ_T0024552.1 MGP_WSBEiJ_G0016646.1 mouse_genomes_project 10 57321484 57321769 + MGP_WSBEiJ_P0024552 BB019430 protein_coding protein_coding MGP_WSBEiJ_T0026435.1 MGP_WSBEiJ_G0017136.1 mouse_genomes_project 10 118794001 118837684 + MGP_WSBEiJ_P0026435 Best3 protein_coding protein_coding MGP_WSBEiJ_T0002990.1 MGP_WSBEiJ_G0002800.1 mouse_genomes_project 10 81197349 81201176 + Atcayos antisense antisense MGP_WSBEiJ_T0002991.1 MGP_WSBEiJ_G0002800.1 mouse_genomes_project 10 81197423 81214839 + Atcayos antisense antisense MGP_WSBEiJ_T0002992.1 MGP_WSBEiJ_G0002800.1 mouse_genomes_project 10 81197431 81216534 + Atcayos antisense antisense MGP_WSBEiJ_T0024056.1 MGP_WSBEiJ_G0016466.1 mouse_genomes_project 10 18856425 18875695 + MGP_WSBEiJ_P0024056 Aldh8a1 protein_coding protein_coding MGP_WSBEiJ_T0024057.1 MGP_WSBEiJ_G0016466.1 mouse_genomes_project 10 18856434 18864704 + Aldh8a1 protein_coding retained_intron MGP_WSBEiJ_T0024058.1 MGP_WSBEiJ_G0016466.1 mouse_genomes_project 10 18856481 18868114 + MGP_WSBEiJ_P0024058 Aldh8a1 protein_coding protein_coding MGP_WSBEiJ_T0024314.1 MGP_WSBEiJ_G0016570.1 mouse_genomes_project 10 39280993 39341079 + MGP_WSBEiJ_P0024314 Wasf1 protein_coding protein_coding MGP_WSBEiJ_T0024315.1 MGP_WSBEiJ_G0016570.1 mouse_genomes_project 10 39281345 39341080 + MGP_WSBEiJ_P0024315 Wasf1 protein_coding protein_coding MGP_WSBEiJ_T0025707.1 MGP_WSBEiJ_G0016936.1 mouse_genomes_project 10 81275638 81277853 - MGP_WSBEiJ_P0025707 Mrpl54 protein_coding protein_coding MGP_WSBEiJ_T0025708.1 MGP_WSBEiJ_G0016936.1 mouse_genomes_project 10 81276355 81277843 - Mrpl54 protein_coding retained_intron MGP_WSBEiJ_T0002982.1 MGP_WSBEiJ_G0002793.1 mouse_genomes_project 10 76174368 76190760 - 4930483K19Rik antisense antisense MGP_WSBEiJ_T0009427.1 MGP_WSBEiJ_G0007584.1 mouse_genomes_project 10 25986937 25987020 - Gm22370 miRNA miRNA MGP_WSBEiJ_T0011082.1 MGP_WSBEiJ_G0009239.1 mouse_genomes_project 10 92613942 92614135 - Gm27999 misc_RNA misc_RNA MGP_WSBEiJ_T0024542.1 MGP_WSBEiJ_G0016642.1 mouse_genomes_project 10 56923235 57026397 + MGP_WSBEiJ_P0024542 Lims1 protein_coding protein_coding MGP_WSBEiJ_T0024543.1 MGP_WSBEiJ_G0016642.1 mouse_genomes_project 10 56923425 57026401 + MGP_WSBEiJ_P0024543 Lims1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024544.1 MGP_WSBEiJ_G0016642.1 mouse_genomes_project 10 56995182 57023489 + MGP_WSBEiJ_P0024544 Lims1 protein_coding protein_coding MGP_WSBEiJ_T0024545.1 MGP_WSBEiJ_G0016642.1 mouse_genomes_project 10 56995197 57023284 + MGP_WSBEiJ_P0024545 Lims1 protein_coding protein_coding MGP_WSBEiJ_T0024546.1 MGP_WSBEiJ_G0016642.1 mouse_genomes_project 10 57008876 57011156 + Lims1 protein_coding processed_transcript MGP_WSBEiJ_T0024547.1 MGP_WSBEiJ_G0016642.1 mouse_genomes_project 10 57018362 57023370 + Lims1 protein_coding processed_transcript MGP_WSBEiJ_T0024121.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22547712 22596024 + MGP_WSBEiJ_P0024121 Med23 protein_coding protein_coding MGP_WSBEiJ_T0024122.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22547763 22576648 + Med23 protein_coding retained_intron MGP_WSBEiJ_T0024123.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22547763 22589098 + MGP_WSBEiJ_P0024123 Med23 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024124.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22547773 22595802 + MGP_WSBEiJ_P0024124 Med23 protein_coding protein_coding MGP_WSBEiJ_T0024125.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22547824 22580786 + Med23 protein_coding processed_transcript MGP_WSBEiJ_T0024126.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22548018 22557198 + MGP_WSBEiJ_P0024126 Med23 protein_coding protein_coding MGP_WSBEiJ_T0024127.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22548352 22554356 + Med23 protein_coding retained_intron MGP_WSBEiJ_T0024128.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22555632 22572578 + MGP_WSBEiJ_P0024128 Med23 protein_coding protein_coding MGP_WSBEiJ_T0024129.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22566866 22595361 + MGP_WSBEiJ_P0024129 Med23 protein_coding protein_coding MGP_WSBEiJ_T0024130.1 MGP_WSBEiJ_G0016497.1 mouse_genomes_project 10 22569371 22572570 + Med23 protein_coding retained_intron MGP_WSBEiJ_T0025030.1 MGP_WSBEiJ_G0016750.1 mouse_genomes_project 10 74928884 74968569 + MGP_WSBEiJ_P0025030 Upb1 protein_coding protein_coding MGP_WSBEiJ_T0025031.1 MGP_WSBEiJ_G0016750.1 mouse_genomes_project 10 74928931 74948109 + Upb1 protein_coding retained_intron MGP_WSBEiJ_T0025032.1 MGP_WSBEiJ_G0016750.1 mouse_genomes_project 10 74932050 74952203 + Upb1 protein_coding retained_intron MGP_WSBEiJ_T0025034.1 MGP_WSBEiJ_G0016750.1 mouse_genomes_project 10 74952606 74954744 + Upb1 protein_coding retained_intron MGP_WSBEiJ_T0026232.1 MGP_WSBEiJ_G0017059.1 mouse_genomes_project 10 96219720 96254652 + MGP_WSBEiJ_P0026232 protein_coding protein_coding MGP_WSBEiJ_T0026243.1 MGP_WSBEiJ_G0017068.1 mouse_genomes_project 10 98518632 98518947 - MGP_WSBEiJ_P0026243 Gm10754 protein_coding protein_coding MGP_WSBEiJ_T0026119.1 MGP_WSBEiJ_G0017032.1 mouse_genomes_project 10 91581722 91603666 + MGP_WSBEiJ_P0026119 Ikbip protein_coding protein_coding MGP_WSBEiJ_T0026120.1 MGP_WSBEiJ_G0017032.1 mouse_genomes_project 10 91581839 91599732 + MGP_WSBEiJ_P0026120 Ikbip protein_coding protein_coding MGP_WSBEiJ_T0026121.1 MGP_WSBEiJ_G0017032.1 mouse_genomes_project 10 91581888 91594496 + Ikbip protein_coding processed_transcript MGP_WSBEiJ_T0026122.1 MGP_WSBEiJ_G0017032.1 mouse_genomes_project 10 91581902 91595079 + Ikbip protein_coding retained_intron MGP_WSBEiJ_T0026123.1 MGP_WSBEiJ_G0017032.1 mouse_genomes_project 10 91597067 91603154 + Ikbip protein_coding processed_transcript MGP_WSBEiJ_T0024309.1 MGP_WSBEiJ_G0016566.1 mouse_genomes_project 10 38935663 38978375 + MGP_WSBEiJ_P0024309 Slc22a16 protein_coding protein_coding MGP_WSBEiJ_T0024310.1 MGP_WSBEiJ_G0016566.1 mouse_genomes_project 10 38935940 38978371 + MGP_WSBEiJ_P0024310 Slc22a16 protein_coding protein_coding MGP_WSBEiJ_T0098849.1 MGP_WSBEiJ_G0037512.1 mouse_genomes_project 10 38583343 38583557 + Rnu3a snoRNA snoRNA MGP_WSBEiJ_T0011079.1 MGP_WSBEiJ_G0009236.1 mouse_genomes_project 10 74969509 74969832 + Gm25545 misc_RNA misc_RNA MGP_WSBEiJ_T0026549.1 MGP_WSBEiJ_G0017173.1 mouse_genomes_project 10 124575196 124580151 + MGP_WSBEiJ_P0026549 Avpr1a protein_coding protein_coding MGP_WSBEiJ_T0026443.1 MGP_WSBEiJ_G0017143.1 mouse_genomes_project 10 119109952 119114333 - MGP_WSBEiJ_P0026443 Lyz2 protein_coding protein_coding MGP_WSBEiJ_T0024195.1 MGP_WSBEiJ_G0016520.1 mouse_genomes_project 10 28504422 28638587 - MGP_WSBEiJ_P0024195 Ncoa7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024196.1 MGP_WSBEiJ_G0016520.1 mouse_genomes_project 10 28504423 28514667 - MGP_WSBEiJ_P0024196 Ncoa7 protein_coding protein_coding MGP_WSBEiJ_T0024197.1 MGP_WSBEiJ_G0016520.1 mouse_genomes_project 10 28504423 28668411 - MGP_WSBEiJ_P0024197 Ncoa7 protein_coding protein_coding MGP_WSBEiJ_T0012171.1 MGP_WSBEiJ_G0010301.1 mouse_genomes_project 10 56670315 56670763 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009461.1 MGP_WSBEiJ_G0007618.1 mouse_genomes_project 10 81440932 81440990 - Mir1191b miRNA miRNA MGP_WSBEiJ_T0005983.1 MGP_WSBEiJ_G0005008.1 mouse_genomes_project 10 10057589 10065995 - B230208H11Rik lincRNA lincRNA MGP_WSBEiJ_T0005984.1 MGP_WSBEiJ_G0005008.1 mouse_genomes_project 10 10057620 10065985 - B230208H11Rik lincRNA lincRNA MGP_WSBEiJ_T0024746.1 MGP_WSBEiJ_G0016697.1 mouse_genomes_project 10 61418657 61463745 - MGP_WSBEiJ_P0024746 Kif1bp protein_coding protein_coding MGP_WSBEiJ_T0024747.1 MGP_WSBEiJ_G0016697.1 mouse_genomes_project 10 61419686 61455335 - MGP_WSBEiJ_P0024747 Kif1bp protein_coding protein_coding MGP_WSBEiJ_T0024748.1 MGP_WSBEiJ_G0016697.1 mouse_genomes_project 10 61443449 61463682 - MGP_WSBEiJ_P0024748 Kif1bp protein_coding protein_coding MGP_WSBEiJ_T0024749.1 MGP_WSBEiJ_G0016697.1 mouse_genomes_project 10 61443523 61451102 - MGP_WSBEiJ_P0024749 Kif1bp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024750.1 MGP_WSBEiJ_G0016697.1 mouse_genomes_project 10 61444579 61448559 - Kif1bp protein_coding retained_intron MGP_WSBEiJ_T0024751.1 MGP_WSBEiJ_G0016697.1 mouse_genomes_project 10 61450851 61455323 - Kif1bp protein_coding retained_intron MGP_WSBEiJ_T0024752.1 MGP_WSBEiJ_G0016697.1 mouse_genomes_project 10 61454969 61463699 - Kif1bp protein_coding retained_intron MGP_WSBEiJ_T0025044.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75098396 75112999 + MGP_WSBEiJ_P0025044 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025045.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75098447 75113046 + MGP_WSBEiJ_P0025045 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025046.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75100939 75111121 + MGP_WSBEiJ_P0025046 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025047.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75100946 75112999 + MGP_WSBEiJ_P0025047 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025048.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75103085 75115661 + MGP_WSBEiJ_P0025048 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025049.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75103090 75116109 + MGP_WSBEiJ_P0025049 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025050.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75105426 75116026 + MGP_WSBEiJ_P0025050 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025051.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75105433 75113046 + MGP_WSBEiJ_P0025051 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025052.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75105448 75122935 + MGP_WSBEiJ_P0025052 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025053.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75105449 75112798 + MGP_WSBEiJ_P0025053 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025054.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75105454 75113046 + MGP_WSBEiJ_P0025054 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025055.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75105466 75112713 + MGP_WSBEiJ_P0025055 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025056.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75108320 75115664 + MGP_WSBEiJ_P0025056 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025057.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75108325 75116104 + MGP_WSBEiJ_P0025057 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025058.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75108364 75118177 + Ggt1 protein_coding processed_transcript MGP_WSBEiJ_T0025059.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75110242 75122917 + MGP_WSBEiJ_P0025059 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025060.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75110680 75116127 + MGP_WSBEiJ_P0025060 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025061.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75112819 75121648 + MGP_WSBEiJ_P0025061 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025062.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75118113 75122893 + MGP_WSBEiJ_P0025062 Ggt1 protein_coding protein_coding MGP_WSBEiJ_T0025063.1 MGP_WSBEiJ_G0016753.1 mouse_genomes_project 10 75121849 75122926 + Ggt1 protein_coding retained_intron MGP_WSBEiJ_T0025743.1 MGP_WSBEiJ_G0016946.1 mouse_genomes_project 10 81389253 81401538 - MGP_WSBEiJ_P0025743 Fzr1 protein_coding protein_coding MGP_WSBEiJ_T0025744.1 MGP_WSBEiJ_G0016946.1 mouse_genomes_project 10 81390115 81401473 - MGP_WSBEiJ_P0025744 Fzr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025745.1 MGP_WSBEiJ_G0016946.1 mouse_genomes_project 10 81390389 81401485 - Fzr1 protein_coding retained_intron MGP_WSBEiJ_T0025746.1 MGP_WSBEiJ_G0016946.1 mouse_genomes_project 10 81390526 81394431 - MGP_WSBEiJ_P0025746 Fzr1 protein_coding protein_coding MGP_WSBEiJ_T0025747.1 MGP_WSBEiJ_G0016946.1 mouse_genomes_project 10 81391293 81392559 - Fzr1 protein_coding retained_intron MGP_WSBEiJ_T0025748.1 MGP_WSBEiJ_G0016946.1 mouse_genomes_project 10 81398384 81401402 - Fzr1 protein_coding processed_transcript MGP_WSBEiJ_T0024189.1 MGP_WSBEiJ_G0016516.1 mouse_genomes_project 10 27280688 27370760 - MGP_WSBEiJ_P0024189 Rspo3 protein_coding protein_coding MGP_WSBEiJ_T0024929.1 MGP_WSBEiJ_G0016733.1 mouse_genomes_project 10 69733315 69874084 + MGP_WSBEiJ_P0024929 Fam13c protein_coding protein_coding MGP_WSBEiJ_T0024930.1 MGP_WSBEiJ_G0016733.1 mouse_genomes_project 10 69733527 69874084 + MGP_WSBEiJ_P0024930 Fam13c protein_coding protein_coding MGP_WSBEiJ_T0024931.1 MGP_WSBEiJ_G0016733.1 mouse_genomes_project 10 69733573 69874086 + MGP_WSBEiJ_P0024931 Fam13c protein_coding protein_coding MGP_WSBEiJ_T0009499.1 MGP_WSBEiJ_G0007656.1 mouse_genomes_project 10 131061979 131062040 - Mir6917 miRNA miRNA MGP_WSBEiJ_T0025844.1 MGP_WSBEiJ_G0016964.1 mouse_genomes_project 10 82209992 82233679 + MGP_WSBEiJ_P0025844 AU041133 protein_coding protein_coding MGP_WSBEiJ_T0025845.1 MGP_WSBEiJ_G0016964.1 mouse_genomes_project 10 82220249 82232625 + MGP_WSBEiJ_P0025845 AU041133 protein_coding protein_coding MGP_WSBEiJ_T0026411.1 MGP_WSBEiJ_G0017130.1 mouse_genomes_project 10 118044579 118145338 + MGP_WSBEiJ_P0026411 Ptprb protein_coding protein_coding MGP_WSBEiJ_T0025304.1 MGP_WSBEiJ_G0016829.1 mouse_genomes_project 10 78808251 78814506 + MGP_WSBEiJ_P0025304 Olfr1351 protein_coding protein_coding MGP_WSBEiJ_T0025305.1 MGP_WSBEiJ_G0016829.1 mouse_genomes_project 10 78813546 78814506 + MGP_WSBEiJ_P0025305 Olfr1351 protein_coding protein_coding MGP_WSBEiJ_T0024600.1 MGP_WSBEiJ_G0016660.1 mouse_genomes_project 10 58682130 58785915 + MGP_WSBEiJ_P0024600 Ascc1 protein_coding protein_coding MGP_WSBEiJ_T0024601.1 MGP_WSBEiJ_G0016660.1 mouse_genomes_project 10 58682652 58785915 + MGP_WSBEiJ_P0024601 Ascc1 protein_coding protein_coding MGP_WSBEiJ_T0024485.1 MGP_WSBEiJ_G0016624.1 mouse_genomes_project 10 51180354 51203648 + MGP_WSBEiJ_P0024485 Nus1 protein_coding protein_coding MGP_WSBEiJ_T0024486.1 MGP_WSBEiJ_G0016624.1 mouse_genomes_project 10 51191738 51196180 + MGP_WSBEiJ_P0024486 Nus1 protein_coding protein_coding MGP_WSBEiJ_T0002994.1 MGP_WSBEiJ_G0002802.1 mouse_genomes_project 10 81434241 81436246 + Gm16104 antisense antisense MGP_WSBEiJ_T0096896.1 MGP_WSBEiJ_G0035577.1 mouse_genomes_project 10 24079390 24079490 + Gm23757 rRNA rRNA MGP_WSBEiJ_T0012144.1 MGP_WSBEiJ_G0010274.1 mouse_genomes_project 10 4837259 4837902 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098846.1 MGP_WSBEiJ_G0037509.1 mouse_genomes_project 10 36465433 36465501 + Gm24297 snoRNA snoRNA MGP_WSBEiJ_T0025685.1 MGP_WSBEiJ_G0016932.1 mouse_genomes_project 10 81200906 81204772 - MGP_WSBEiJ_P0025685 Nmrk2 protein_coding protein_coding MGP_WSBEiJ_T0025302.1 MGP_WSBEiJ_G0016828.1 mouse_genomes_project 10 78773858 78777529 + MGP_WSBEiJ_P0025302 Olfr1352 protein_coding protein_coding MGP_WSBEiJ_T0025303.1 MGP_WSBEiJ_G0016828.1 mouse_genomes_project 10 78773923 78777066 + MGP_WSBEiJ_P0025303 Olfr1352 protein_coding protein_coding MGP_WSBEiJ_T0024410.1 MGP_WSBEiJ_G0016592.1 mouse_genomes_project 10 41480047 41666777 - MGP_WSBEiJ_P0024410 protein_coding protein_coding MGP_WSBEiJ_T0024411.1 MGP_WSBEiJ_G0016592.1 mouse_genomes_project 10 41665349 41666768 - MGP_WSBEiJ_P0024411 protein_coding protein_coding MGP_WSBEiJ_T0026466.1 MGP_WSBEiJ_G0017148.1 mouse_genomes_project 10 119636549 119682982 - MGP_WSBEiJ_P0026466 Nup107 protein_coding protein_coding MGP_WSBEiJ_T0026467.1 MGP_WSBEiJ_G0017148.1 mouse_genomes_project 10 119636568 119682989 - MGP_WSBEiJ_P0026467 Nup107 protein_coding protein_coding MGP_WSBEiJ_T0025495.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80142601 80160045 + MGP_WSBEiJ_P0025495 Mum1 protein_coding protein_coding MGP_WSBEiJ_T0025496.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80142822 80160042 + Mum1 protein_coding retained_intron MGP_WSBEiJ_T0025497.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80142839 80148860 + MGP_WSBEiJ_P0025497 Mum1 protein_coding protein_coding MGP_WSBEiJ_T0025498.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80142847 80160040 + Mum1 protein_coding retained_intron MGP_WSBEiJ_T0025499.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80142918 80145340 + Mum1 protein_coding retained_intron MGP_WSBEiJ_T0025500.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80150373 80160045 + Mum1 protein_coding retained_intron MGP_WSBEiJ_T0025501.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80150374 80153294 + Mum1 protein_coding retained_intron MGP_WSBEiJ_T0025502.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80150439 80160043 + Mum1 protein_coding retained_intron MGP_WSBEiJ_T0025503.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80152290 80156568 + Mum1 protein_coding retained_intron MGP_WSBEiJ_T0025504.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80157713 80160042 + Mum1 protein_coding retained_intron MGP_WSBEiJ_T0025505.1 MGP_WSBEiJ_G0016879.1 mouse_genomes_project 10 80158751 80160042 + Mum1 protein_coding processed_transcript MGP_WSBEiJ_T0025338.1 MGP_WSBEiJ_G0016843.1 mouse_genomes_project 10 79554934 79562635 + MGP_WSBEiJ_P0025338 Gzmm protein_coding protein_coding MGP_WSBEiJ_T0025339.1 MGP_WSBEiJ_G0016843.1 mouse_genomes_project 10 79561131 79562634 + Gzmm protein_coding processed_transcript MGP_WSBEiJ_T0002938.1 MGP_WSBEiJ_G0002759.1 mouse_genomes_project 10 4807430 4808531 + B430219N15Rik antisense antisense MGP_WSBEiJ_T0002939.1 MGP_WSBEiJ_G0002759.1 mouse_genomes_project 10 4807509 4808599 + B430219N15Rik antisense antisense MGP_WSBEiJ_T0023789.1 MGP_WSBEiJ_G0016396.1 mouse_genomes_project 10 3955208 4050995 - MGP_WSBEiJ_P0023789 Ipcef1 protein_coding protein_coding MGP_WSBEiJ_T0023790.1 MGP_WSBEiJ_G0016396.1 mouse_genomes_project 10 3960266 4050331 - MGP_WSBEiJ_P0023790 Ipcef1 protein_coding protein_coding MGP_WSBEiJ_T0023791.1 MGP_WSBEiJ_G0016396.1 mouse_genomes_project 10 3983357 4050933 - Ipcef1 protein_coding processed_transcript MGP_WSBEiJ_T0023792.1 MGP_WSBEiJ_G0016396.1 mouse_genomes_project 10 3983357 4051084 - Ipcef1 protein_coding processed_transcript MGP_WSBEiJ_T0023793.1 MGP_WSBEiJ_G0016396.1 mouse_genomes_project 10 3985634 4095641 - MGP_WSBEiJ_P0023793 Ipcef1 protein_coding protein_coding MGP_WSBEiJ_T0023794.1 MGP_WSBEiJ_G0016396.1 mouse_genomes_project 10 3985714 4051153 - Ipcef1 protein_coding processed_transcript MGP_WSBEiJ_T0023795.1 MGP_WSBEiJ_G0016396.1 mouse_genomes_project 10 4021770 4073041 - MGP_WSBEiJ_P0023795 Ipcef1 protein_coding protein_coding MGP_WSBEiJ_T0006027.1 MGP_WSBEiJ_G0005042.1 mouse_genomes_project 10 81657316 81660740 - Gm26896 lincRNA lincRNA MGP_WSBEiJ_T0098835.1 MGP_WSBEiJ_G0037498.1 mouse_genomes_project 10 12244113 12244243 + Gm23892 snoRNA snoRNA MGP_WSBEiJ_T0023995.1 MGP_WSBEiJ_G0016444.1 mouse_genomes_project 10 15924683 15930628 - MGP_WSBEiJ_P0023995 Hebp2 protein_coding protein_coding MGP_WSBEiJ_T0025215.1 MGP_WSBEiJ_G0016798.1 mouse_genomes_project 10 77413127 77413490 + MGP_WSBEiJ_P0025215 Gm10142 protein_coding protein_coding MGP_WSBEiJ_T0026162.1 MGP_WSBEiJ_G0017042.1 mouse_genomes_project 10 94143387 94190723 + MGP_WSBEiJ_P0026162 Ccdc38 protein_coding protein_coding MGP_WSBEiJ_T0026163.1 MGP_WSBEiJ_G0017042.1 mouse_genomes_project 10 94152704 94157939 + Ccdc38 protein_coding retained_intron MGP_WSBEiJ_T0026164.1 MGP_WSBEiJ_G0017042.1 mouse_genomes_project 10 94157224 94157984 + Ccdc38 protein_coding retained_intron MGP_WSBEiJ_T0026165.1 MGP_WSBEiJ_G0017042.1 mouse_genomes_project 10 94157227 94188410 + Ccdc38 protein_coding processed_transcript MGP_WSBEiJ_T0026166.1 MGP_WSBEiJ_G0017042.1 mouse_genomes_project 10 94170279 94179444 + Ccdc38 protein_coding processed_transcript MGP_WSBEiJ_T0024756.1 MGP_WSBEiJ_G0016700.1 mouse_genomes_project 10 61553028 61628518 - MGP_WSBEiJ_P0024756 Stox1 protein_coding protein_coding MGP_WSBEiJ_T0024757.1 MGP_WSBEiJ_G0016700.1 mouse_genomes_project 10 61553028 61628191 - MGP_WSBEiJ_P0024757 Stox1 protein_coding protein_coding MGP_WSBEiJ_T0024758.1 MGP_WSBEiJ_G0016700.1 mouse_genomes_project 10 61561415 61628191 - MGP_WSBEiJ_P0024758 Stox1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024177.1 MGP_WSBEiJ_G0016511.1 mouse_genomes_project 10 26952050 26952965 - MGP_WSBEiJ_P0024177 Gm9996 protein_coding protein_coding MGP_WSBEiJ_T0025135.1 MGP_WSBEiJ_G0016780.1 mouse_genomes_project 10 76190805 76198486 + MGP_WSBEiJ_P0025135 Spatc1l protein_coding protein_coding MGP_WSBEiJ_T0025136.1 MGP_WSBEiJ_G0016780.1 mouse_genomes_project 10 76190842 76198315 + MGP_WSBEiJ_P0025136 Spatc1l protein_coding protein_coding MGP_WSBEiJ_T0025654.1 MGP_WSBEiJ_G0016924.1 mouse_genomes_project 10 81058789 81071323 + MGP_WSBEiJ_P0025654 Thop1 protein_coding protein_coding MGP_WSBEiJ_T0025655.1 MGP_WSBEiJ_G0016924.1 mouse_genomes_project 10 81058881 81063641 + Thop1 protein_coding retained_intron MGP_WSBEiJ_T0025656.1 MGP_WSBEiJ_G0016924.1 mouse_genomes_project 10 81058913 81067368 + Thop1 protein_coding processed_transcript MGP_WSBEiJ_T0025657.1 MGP_WSBEiJ_G0016924.1 mouse_genomes_project 10 81062042 81067519 + Thop1 protein_coding retained_intron MGP_WSBEiJ_T0025658.1 MGP_WSBEiJ_G0016924.1 mouse_genomes_project 10 81067631 81068843 + Thop1 protein_coding retained_intron MGP_WSBEiJ_T0009488.1 MGP_WSBEiJ_G0007645.1 mouse_genomes_project 10 129011429 129011539 - Mir378d miRNA miRNA MGP_WSBEiJ_T0026376.1 MGP_WSBEiJ_G0017116.1 mouse_genomes_project 10 114517537 114521122 - MGP_WSBEiJ_P0026376 Atxn7l3b protein_coding protein_coding MGP_WSBEiJ_T0026377.1 MGP_WSBEiJ_G0017116.1 mouse_genomes_project 10 114519898 114521128 - Atxn7l3b protein_coding processed_transcript MGP_WSBEiJ_T0024668.1 MGP_WSBEiJ_G0016676.1 mouse_genomes_project 10 60233250 60252743 - MGP_WSBEiJ_P0024668 Eif4ebp2 protein_coding protein_coding MGP_WSBEiJ_T0096757.1 MGP_WSBEiJ_G0035438.1 mouse_genomes_project 10 62996425 62996790 + pseudogene pseudogene MGP_WSBEiJ_T0097638.1 MGP_WSBEiJ_G0036301.1 mouse_genomes_project 10 61817779 61817885 - Gm26479 snRNA snRNA MGP_WSBEiJ_T0006062.1 MGP_WSBEiJ_G0005062.1 mouse_genomes_project 10 113036235 113044944 - 4933440J02Rik lincRNA lincRNA MGP_WSBEiJ_T0026782.1 MGP_WSBEiJ_G0017249.1 mouse_genomes_project 10 130962821 130965838 - MGP_WSBEiJ_P0026782 Myl6 protein_coding protein_coding MGP_WSBEiJ_T0026783.1 MGP_WSBEiJ_G0017249.1 mouse_genomes_project 10 130963697 130965774 - MGP_WSBEiJ_P0026783 Myl6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0097662.1 MGP_WSBEiJ_G0036325.1 mouse_genomes_project 10 112310979 112311085 - Gm22236 snRNA snRNA MGP_WSBEiJ_T0025029.1 MGP_WSBEiJ_G0016749.1 mouse_genomes_project 10 74864759 75054453 - MGP_WSBEiJ_P0025029 Gucd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025033.1 MGP_WSBEiJ_G0016749.1 mouse_genomes_project 10 74938813 75048465 - MGP_WSBEiJ_P0025033 Gucd1 protein_coding protein_coding MGP_WSBEiJ_T0025035.1 MGP_WSBEiJ_G0016749.1 mouse_genomes_project 10 75045981 75054469 - MGP_WSBEiJ_P0025035 Gucd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025036.1 MGP_WSBEiJ_G0016749.1 mouse_genomes_project 10 75046015 75048448 - Gucd1 protein_coding retained_intron MGP_WSBEiJ_T0025037.1 MGP_WSBEiJ_G0016749.1 mouse_genomes_project 10 75046061 75054376 - MGP_WSBEiJ_P0025037 Gucd1 protein_coding protein_coding MGP_WSBEiJ_T0025038.1 MGP_WSBEiJ_G0016749.1 mouse_genomes_project 10 75046148 75054350 - MGP_WSBEiJ_P0025038 Gucd1 protein_coding protein_coding MGP_WSBEiJ_T0025039.1 MGP_WSBEiJ_G0016749.1 mouse_genomes_project 10 75046900 75055001 - MGP_WSBEiJ_P0025039 Gucd1 protein_coding protein_coding MGP_WSBEiJ_T0025040.1 MGP_WSBEiJ_G0016749.1 mouse_genomes_project 10 75048363 75054440 - MGP_WSBEiJ_P0025040 Gucd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009500.1 MGP_WSBEiJ_G0007657.1 mouse_genomes_project 10 132152098 132152208 - Gm23252 miRNA miRNA MGP_WSBEiJ_T0024663.1 MGP_WSBEiJ_G0016672.1 mouse_genomes_project 10 59976115 60060636 - MGP_WSBEiJ_P0024663 Adamts14 protein_coding protein_coding MGP_WSBEiJ_T0024664.1 MGP_WSBEiJ_G0016672.1 mouse_genomes_project 10 59977453 60060440 - MGP_WSBEiJ_P0024664 Adamts14 protein_coding protein_coding MGP_WSBEiJ_T0098860.1 MGP_WSBEiJ_G0037523.1 mouse_genomes_project 10 68332218 68332335 + Gm24172 snoRNA snoRNA MGP_WSBEiJ_T0026706.1 MGP_WSBEiJ_G0017226.1 mouse_genomes_project 10 130448007 130463525 + MGP_WSBEiJ_P0026706 Prim1 protein_coding protein_coding MGP_WSBEiJ_T0026707.1 MGP_WSBEiJ_G0017226.1 mouse_genomes_project 10 130448011 130463579 + MGP_WSBEiJ_P0026707 Prim1 protein_coding protein_coding MGP_WSBEiJ_T0026708.1 MGP_WSBEiJ_G0017226.1 mouse_genomes_project 10 130448035 130463407 + Prim1 protein_coding retained_intron MGP_WSBEiJ_T0026709.1 MGP_WSBEiJ_G0017226.1 mouse_genomes_project 10 130453744 130455903 + Prim1 protein_coding retained_intron MGP_WSBEiJ_T0026710.1 MGP_WSBEiJ_G0017226.1 mouse_genomes_project 10 130460228 130463575 + Prim1 protein_coding retained_intron MGP_WSBEiJ_T0024632.1 MGP_WSBEiJ_G0016666.1 mouse_genomes_project 10 59123618 59127346 + MGP_WSBEiJ_P0024632 Gm17455 protein_coding protein_coding MGP_WSBEiJ_T0026739.1 MGP_WSBEiJ_G0017234.1 mouse_genomes_project 10 130676346 130682318 + MGP_WSBEiJ_P0026739 Mip protein_coding protein_coding MGP_WSBEiJ_T0098828.1 MGP_WSBEiJ_G0037491.1 mouse_genomes_project 10 6961735 6961866 - Gm25635 snoRNA snoRNA MGP_WSBEiJ_T0026563.1 MGP_WSBEiJ_G0017178.1 mouse_genomes_project 10 127457410 127561940 - MGP_WSBEiJ_P0026563 Slc16a7 protein_coding protein_coding MGP_WSBEiJ_T0026564.1 MGP_WSBEiJ_G0017178.1 mouse_genomes_project 10 127458440 127540543 - MGP_WSBEiJ_P0026564 Slc16a7 protein_coding protein_coding MGP_WSBEiJ_T0024842.1 MGP_WSBEiJ_G0016721.1 mouse_genomes_project 10 66687057 66689274 + MGP_WSBEiJ_P0024842 Gm10797 protein_coding protein_coding MGP_WSBEiJ_T0002980.1 MGP_WSBEiJ_G0002792.1 mouse_genomes_project 10 76010395 76023886 + 1700094J05Rik antisense antisense MGP_WSBEiJ_T0002981.1 MGP_WSBEiJ_G0002792.1 mouse_genomes_project 10 76020071 76020439 + 1700094J05Rik antisense antisense MGP_WSBEiJ_T0016509.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37901191 38016841 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016510.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37901193 38016840 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016511.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37902402 38016650 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016512.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37902432 38016683 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016513.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37902475 38016835 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016514.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37902491 38016648 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016515.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37902753 38016610 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016516.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37920952 37928489 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016517.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37921044 38016816 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016518.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37935831 38013012 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016519.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37936399 38016840 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016520.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 37961710 38016840 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016521.1 MGP_WSBEiJ_G0014551.1 mouse_genomes_project 10 38006230 38016801 - E130307A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0024669.1 MGP_WSBEiJ_G0016677.1 mouse_genomes_project 10 60268983 60270676 - MGP_WSBEiJ_P0024669 D830039M14Rik protein_coding protein_coding MGP_WSBEiJ_T0026757.1 MGP_WSBEiJ_G0017240.1 mouse_genomes_project 10 130763689 130781668 + MGP_WSBEiJ_P0026757 Pan2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026758.1 MGP_WSBEiJ_G0017240.1 mouse_genomes_project 10 130763696 130781674 + MGP_WSBEiJ_P0026758 Pan2 protein_coding protein_coding MGP_WSBEiJ_T0026296.1 MGP_WSBEiJ_G0017087.1 mouse_genomes_project 10 104178181 104361747 - MGP_WSBEiJ_P0026296 Lrriq1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026297.1 MGP_WSBEiJ_G0017087.1 mouse_genomes_project 10 104199504 104398246 - MGP_WSBEiJ_P0026297 Lrriq1 protein_coding protein_coding MGP_WSBEiJ_T0026298.1 MGP_WSBEiJ_G0017087.1 mouse_genomes_project 10 104361626 104398246 - MGP_WSBEiJ_P0026298 Lrriq1 protein_coding protein_coding MGP_WSBEiJ_T0026299.1 MGP_WSBEiJ_G0017087.1 mouse_genomes_project 10 104375788 104398217 - MGP_WSBEiJ_P0026299 Lrriq1 protein_coding protein_coding MGP_WSBEiJ_T0006017.1 MGP_WSBEiJ_G0005034.1 mouse_genomes_project 10 65984385 65993460 - 1110002J07Rik lincRNA lincRNA MGP_WSBEiJ_T0026436.1 MGP_WSBEiJ_G0017137.1 mouse_genomes_project 10 118861069 118862491 + MGP_WSBEiJ_P0026436 Lrrc10 protein_coding protein_coding MGP_WSBEiJ_T0025670.1 MGP_WSBEiJ_G0016927.1 mouse_genomes_project 10 81129577 81138885 + MGP_WSBEiJ_P0025670 Zbtb7a protein_coding protein_coding MGP_WSBEiJ_T0025671.1 MGP_WSBEiJ_G0016927.1 mouse_genomes_project 10 81130628 81146625 + MGP_WSBEiJ_P0025671 Zbtb7a protein_coding protein_coding MGP_WSBEiJ_T0025672.1 MGP_WSBEiJ_G0016927.1 mouse_genomes_project 10 81130906 81142845 + MGP_WSBEiJ_P0025672 Zbtb7a protein_coding protein_coding MGP_WSBEiJ_T0025673.1 MGP_WSBEiJ_G0016927.1 mouse_genomes_project 10 81130923 81138496 + MGP_WSBEiJ_P0025673 Zbtb7a protein_coding protein_coding MGP_WSBEiJ_T0025674.1 MGP_WSBEiJ_G0016927.1 mouse_genomes_project 10 81130935 81147398 + MGP_WSBEiJ_P0025674 Zbtb7a protein_coding protein_coding MGP_WSBEiJ_T0025675.1 MGP_WSBEiJ_G0016927.1 mouse_genomes_project 10 81132319 81142860 + MGP_WSBEiJ_P0025675 Zbtb7a protein_coding protein_coding MGP_WSBEiJ_T0000797.1 MGP_WSBEiJ_G0000736.1 mouse_genomes_project 10 101737627 101738394 - TEC TEC MGP_WSBEiJ_T0024244.1 MGP_WSBEiJ_G0016546.1 mouse_genomes_project 10 35172352 35202724 + MGP_WSBEiJ_P0024244 Hdac2 protein_coding protein_coding MGP_WSBEiJ_T0024245.1 MGP_WSBEiJ_G0016546.1 mouse_genomes_project 10 35172378 35195707 + MGP_WSBEiJ_P0024245 Hdac2 protein_coding protein_coding MGP_WSBEiJ_T0024246.1 MGP_WSBEiJ_G0016546.1 mouse_genomes_project 10 35190485 35202723 + Hdac2 protein_coding processed_transcript MGP_WSBEiJ_T0024247.1 MGP_WSBEiJ_G0016546.1 mouse_genomes_project 10 35199012 35202447 + Hdac2 protein_coding retained_intron MGP_WSBEiJ_T0025371.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79729873 79734980 + protein_coding retained_intron MGP_WSBEiJ_T0025372.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79729901 79738708 + protein_coding retained_intron MGP_WSBEiJ_T0025373.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79729909 79734881 + protein_coding processed_transcript MGP_WSBEiJ_T0025374.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79729920 79738692 + MGP_WSBEiJ_P0025374 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025375.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79729933 79734282 + MGP_WSBEiJ_P0025375 protein_coding protein_coding MGP_WSBEiJ_T0025376.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79729935 79734312 + protein_coding processed_transcript MGP_WSBEiJ_T0025377.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79729935 79734632 + MGP_WSBEiJ_P0025377 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025378.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79729982 79739709 + MGP_WSBEiJ_P0025378 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025379.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79730306 79734364 + MGP_WSBEiJ_P0025379 protein_coding protein_coding MGP_WSBEiJ_T0025380.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79734039 79734655 + MGP_WSBEiJ_P0025380 protein_coding protein_coding MGP_WSBEiJ_T0025381.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79734261 79735393 + protein_coding retained_intron MGP_WSBEiJ_T0025382.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79734917 79738321 + MGP_WSBEiJ_P0025382 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025384.1 MGP_WSBEiJ_G0016853.1 mouse_genomes_project 10 79737005 79738318 + protein_coding retained_intron MGP_WSBEiJ_T0026661.1 MGP_WSBEiJ_G0017209.1 mouse_genomes_project 10 129892834 129898153 - MGP_WSBEiJ_P0026661 Shmt2 protein_coding protein_coding MGP_WSBEiJ_T0026889.1 MGP_WSBEiJ_G0017308.1 mouse_genomes_project 10 132509021 132509960 - MGP_WSBEiJ_P0026889 Olfr816 protein_coding protein_coding MGP_WSBEiJ_T0097654.1 MGP_WSBEiJ_G0036317.1 mouse_genomes_project 10 90925410 90925505 + Gm22602 snRNA snRNA MGP_WSBEiJ_T0006006.1 MGP_WSBEiJ_G0005027.1 mouse_genomes_project 10 59789873 59798130 + Gm20611 lincRNA lincRNA MGP_WSBEiJ_T0023800.1 MGP_WSBEiJ_G0016399.1 mouse_genomes_project 10 4598395 4619458 + MGP_WSBEiJ_P0023800 Lrp11 protein_coding protein_coding MGP_WSBEiJ_T0023801.1 MGP_WSBEiJ_G0016399.1 mouse_genomes_project 10 4598412 4641756 + MGP_WSBEiJ_P0023801 Lrp11 protein_coding protein_coding MGP_WSBEiJ_T0023802.1 MGP_WSBEiJ_G0016399.1 mouse_genomes_project 10 4598574 4641756 + MGP_WSBEiJ_P0023802 Lrp11 protein_coding protein_coding MGP_WSBEiJ_T0023803.1 MGP_WSBEiJ_G0016399.1 mouse_genomes_project 10 4598722 4640295 + MGP_WSBEiJ_P0023803 Lrp11 protein_coding protein_coding MGP_WSBEiJ_T0023804.1 MGP_WSBEiJ_G0016399.1 mouse_genomes_project 10 4605813 4640025 + MGP_WSBEiJ_P0023804 Lrp11 protein_coding protein_coding MGP_WSBEiJ_T0026882.1 MGP_WSBEiJ_G0017304.1 mouse_genomes_project 10 132349138 132352092 + MGP_WSBEiJ_P0026882 Olfr808 protein_coding protein_coding MGP_WSBEiJ_T0026883.1 MGP_WSBEiJ_G0017304.1 mouse_genomes_project 10 132351153 132352092 + MGP_WSBEiJ_P0026883 Olfr808 protein_coding protein_coding MGP_WSBEiJ_T0016539.1 MGP_WSBEiJ_G0014559.1 mouse_genomes_project 10 122958076 122963775 + Gm15910 processed_transcript processed_transcript MGP_WSBEiJ_T0009425.1 MGP_WSBEiJ_G0007582.1 mouse_genomes_project 10 22746951 22747036 + Gm22566 miRNA miRNA MGP_WSBEiJ_T0026375.1 MGP_WSBEiJ_G0017115.1 mouse_genomes_project 10 113842740 114046203 + MGP_WSBEiJ_P0026375 Kcnc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026825.1 MGP_WSBEiJ_G0017269.1 mouse_genomes_project 10 131394357 131405068 - MGP_WSBEiJ_P0026825 Gdf11 protein_coding protein_coding MGP_WSBEiJ_T0002955.1 MGP_WSBEiJ_G0002771.1 mouse_genomes_project 10 38689975 38691571 - Cdk19os antisense antisense MGP_WSBEiJ_T0002956.1 MGP_WSBEiJ_G0002771.1 mouse_genomes_project 10 38690559 38691571 - Cdk19os antisense antisense MGP_WSBEiJ_T0009451.1 MGP_WSBEiJ_G0007608.1 mouse_genomes_project 10 79387492 79387554 - Mir6909 miRNA miRNA MGP_WSBEiJ_T0026201.1 MGP_WSBEiJ_G0017050.1 mouse_genomes_project 10 94771707 94822545 + MGP_WSBEiJ_P0026201 Nr2c1 protein_coding protein_coding MGP_WSBEiJ_T0026202.1 MGP_WSBEiJ_G0017050.1 mouse_genomes_project 10 94772103 94821014 + MGP_WSBEiJ_P0026202 Nr2c1 protein_coding protein_coding MGP_WSBEiJ_T0026203.1 MGP_WSBEiJ_G0017050.1 mouse_genomes_project 10 94779999 94820685 + MGP_WSBEiJ_P0026203 Nr2c1 protein_coding protein_coding MGP_WSBEiJ_T0100455.1 MGP_WSBEiJ_G0038914.1 mouse_genomes_project 10 131883819 131884026 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006067.1 MGP_WSBEiJ_G0005066.1 mouse_genomes_project 10 118768491 118771184 + D630029K05Rik lincRNA lincRNA MGP_WSBEiJ_T0006068.1 MGP_WSBEiJ_G0005066.1 mouse_genomes_project 10 118768524 118771389 + D630029K05Rik lincRNA lincRNA MGP_WSBEiJ_T0006069.1 MGP_WSBEiJ_G0005066.1 mouse_genomes_project 10 118769541 118771519 + D630029K05Rik lincRNA lincRNA MGP_WSBEiJ_T0006070.1 MGP_WSBEiJ_G0005066.1 mouse_genomes_project 10 118770062 118772876 + D630029K05Rik lincRNA lincRNA MGP_WSBEiJ_T0026614.1 MGP_WSBEiJ_G0017197.1 mouse_genomes_project 10 129578611 129618401 - MGP_WSBEiJ_P0026614 Kif5a protein_coding protein_coding MGP_WSBEiJ_T0097642.1 MGP_WSBEiJ_G0036305.1 mouse_genomes_project 10 75153758 75153871 - Gm26402 snRNA snRNA MGP_WSBEiJ_T0026833.1 MGP_WSBEiJ_G0017272.1 mouse_genomes_project 10 131432475 131438119 - MGP_WSBEiJ_P0026833 Bloc1s1 protein_coding protein_coding MGP_WSBEiJ_T0026836.1 MGP_WSBEiJ_G0017272.1 mouse_genomes_project 10 131434508 131438119 - MGP_WSBEiJ_P0026836 Bloc1s1 protein_coding protein_coding MGP_WSBEiJ_T0026837.1 MGP_WSBEiJ_G0017272.1 mouse_genomes_project 10 131434541 131438630 - MGP_WSBEiJ_P0026837 Bloc1s1 protein_coding protein_coding MGP_WSBEiJ_T0026838.1 MGP_WSBEiJ_G0017272.1 mouse_genomes_project 10 131434637 131437621 - Bloc1s1 protein_coding processed_transcript MGP_WSBEiJ_T0026839.1 MGP_WSBEiJ_G0017272.1 mouse_genomes_project 10 131437110 131438119 - Bloc1s1 protein_coding retained_intron MGP_WSBEiJ_T0023943.1 MGP_WSBEiJ_G0016431.1 mouse_genomes_project 10 11164655 11359372 + MGP_WSBEiJ_P0023943 Hivep2 protein_coding protein_coding MGP_WSBEiJ_T0023944.1 MGP_WSBEiJ_G0016431.1 mouse_genomes_project 10 11164959 11360157 + MGP_WSBEiJ_P0023944 Hivep2 protein_coding protein_coding MGP_WSBEiJ_T0023945.1 MGP_WSBEiJ_G0016431.1 mouse_genomes_project 10 11164959 11360156 + MGP_WSBEiJ_P0023945 Hivep2 protein_coding protein_coding MGP_WSBEiJ_T0023946.1 MGP_WSBEiJ_G0016431.1 mouse_genomes_project 10 11165225 11336660 + MGP_WSBEiJ_P0023946 Hivep2 protein_coding protein_coding MGP_WSBEiJ_T0023947.1 MGP_WSBEiJ_G0016431.1 mouse_genomes_project 10 11165540 11207578 + Hivep2 protein_coding retained_intron MGP_WSBEiJ_T0023948.1 MGP_WSBEiJ_G0016431.1 mouse_genomes_project 10 11165603 11283636 + Hivep2 protein_coding processed_transcript MGP_WSBEiJ_T0012189.1 MGP_WSBEiJ_G0010319.1 mouse_genomes_project 10 94271626 94272089 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025417.1 MGP_WSBEiJ_G0016863.1 mouse_genomes_project 10 79845988 79855029 + MGP_WSBEiJ_P0025417 Wdr18 protein_coding protein_coding MGP_WSBEiJ_T0024109.1 MGP_WSBEiJ_G0016492.1 mouse_genomes_project 10 21782519 21823837 + MGP_WSBEiJ_P0024109 Stx7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0097615.1 MGP_WSBEiJ_G0036278.1 mouse_genomes_project 10 11094335 11094442 - Gm22995 snRNA snRNA MGP_WSBEiJ_T0097650.1 MGP_WSBEiJ_G0036313.1 mouse_genomes_project 10 86278541 86278645 - Gm24430 snRNA snRNA MGP_WSBEiJ_T0025892.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83766926 83815862 - MGP_WSBEiJ_P0025892 Appl2 protein_coding protein_coding MGP_WSBEiJ_T0025893.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83767290 83770001 - MGP_WSBEiJ_P0025893 Appl2 protein_coding protein_coding MGP_WSBEiJ_T0025894.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83767635 83775141 - MGP_WSBEiJ_P0025894 Appl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025895.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83768796 83770206 - Appl2 protein_coding retained_intron MGP_WSBEiJ_T0025896.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83769637 83778020 - Appl2 protein_coding retained_intron MGP_WSBEiJ_T0025897.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83769741 83777401 - Appl2 protein_coding retained_intron MGP_WSBEiJ_T0025898.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83772111 83815794 - Appl2 protein_coding retained_intron MGP_WSBEiJ_T0025899.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83772231 83777867 - Appl2 protein_coding retained_intron MGP_WSBEiJ_T0025900.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83774739 83777235 - Appl2 protein_coding retained_intron MGP_WSBEiJ_T0025901.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83780397 83794483 - Appl2 protein_coding processed_transcript MGP_WSBEiJ_T0025902.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83783553 83815789 - MGP_WSBEiJ_P0025902 Appl2 protein_coding protein_coding MGP_WSBEiJ_T0025903.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83786885 83815727 - MGP_WSBEiJ_P0025903 Appl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025904.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83786999 83803629 - Appl2 protein_coding processed_transcript MGP_WSBEiJ_T0025905.1 MGP_WSBEiJ_G0016979.1 mouse_genomes_project 10 83790818 83815799 - MGP_WSBEiJ_P0025905 Appl2 protein_coding protein_coding MGP_WSBEiJ_T0025269.1 MGP_WSBEiJ_G0016811.1 mouse_genomes_project 10 77935564 77949817 - MGP_WSBEiJ_P0025269 Pwp2 protein_coding protein_coding MGP_WSBEiJ_T0023846.1 MGP_WSBEiJ_G0016410.1 mouse_genomes_project 10 6613352 6616508 - MGP_WSBEiJ_P0023846 Gm9930 protein_coding protein_coding MGP_WSBEiJ_T0025523.1 MGP_WSBEiJ_G0016883.1 mouse_genomes_project 10 80215400 80217037 + MGP_WSBEiJ_P0025523 Rps15 protein_coding protein_coding MGP_WSBEiJ_T0000806.1 MGP_WSBEiJ_G0000745.1 mouse_genomes_project 10 122743931 122749311 - TEC TEC MGP_WSBEiJ_T0025448.1 MGP_WSBEiJ_G0016871.1 mouse_genomes_project 10 79949658 80000591 - MGP_WSBEiJ_P0025448 Sbno2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025449.1 MGP_WSBEiJ_G0016871.1 mouse_genomes_project 10 79950084 80000596 - MGP_WSBEiJ_P0025449 Sbno2 protein_coding protein_coding MGP_WSBEiJ_T0024798.1 MGP_WSBEiJ_G0016708.1 mouse_genomes_project 10 62054068 62054518 + MGP_WSBEiJ_P0024798 Atoh7 protein_coding protein_coding MGP_WSBEiJ_T0024173.1 MGP_WSBEiJ_G0016510.1 mouse_genomes_project 10 26761201 26775176 - MGP_WSBEiJ_P0024173 2310057J18Rik protein_coding protein_coding MGP_WSBEiJ_T0024174.1 MGP_WSBEiJ_G0016510.1 mouse_genomes_project 10 26761277 26776085 - MGP_WSBEiJ_P0024174 2310057J18Rik protein_coding protein_coding MGP_WSBEiJ_T0024175.1 MGP_WSBEiJ_G0016510.1 mouse_genomes_project 10 26761279 26763103 - 2310057J18Rik protein_coding retained_intron MGP_WSBEiJ_T0024176.1 MGP_WSBEiJ_G0016510.1 mouse_genomes_project 10 26761279 26776095 - MGP_WSBEiJ_P0024176 2310057J18Rik protein_coding protein_coding MGP_WSBEiJ_T0026818.1 MGP_WSBEiJ_G0017264.1 mouse_genomes_project 10 131295405 131306754 + MGP_WSBEiJ_P0026818 Mmp19 protein_coding protein_coding MGP_WSBEiJ_T0024666.1 MGP_WSBEiJ_G0016674.1 mouse_genomes_project 10 60111764 60177306 - MGP_WSBEiJ_P0024666 Pald1 protein_coding protein_coding MGP_WSBEiJ_T0025421.1 MGP_WSBEiJ_G0016865.1 mouse_genomes_project 10 79860748 79864574 - Tmem259 protein_coding retained_intron MGP_WSBEiJ_T0025422.1 MGP_WSBEiJ_G0016865.1 mouse_genomes_project 10 79861690 79864741 - Tmem259 protein_coding retained_intron MGP_WSBEiJ_T0025423.1 MGP_WSBEiJ_G0016865.1 mouse_genomes_project 10 79862918 79872880 - MGP_WSBEiJ_P0025423 Tmem259 protein_coding protein_coding MGP_WSBEiJ_T0025424.1 MGP_WSBEiJ_G0016865.1 mouse_genomes_project 10 79863158 79870964 - MGP_WSBEiJ_P0025424 Tmem259 protein_coding protein_coding MGP_WSBEiJ_T0025425.1 MGP_WSBEiJ_G0016865.1 mouse_genomes_project 10 79863763 79864577 - Tmem259 protein_coding retained_intron MGP_WSBEiJ_T0096760.1 MGP_WSBEiJ_G0035441.1 mouse_genomes_project 10 75127829 75128341 - pseudogene pseudogene MGP_WSBEiJ_T0009489.1 MGP_WSBEiJ_G0007646.1 mouse_genomes_project 10 129325753 129325837 + Mir26a-2 miRNA miRNA MGP_WSBEiJ_T0009438.1 MGP_WSBEiJ_G0007595.1 mouse_genomes_project 10 59714896 59715018 + Mir466j miRNA miRNA MGP_WSBEiJ_T0025313.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79396711 79411504 - MGP_WSBEiJ_P0025313 Mier2 protein_coding protein_coding MGP_WSBEiJ_T0025314.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79396711 79411396 - MGP_WSBEiJ_P0025314 Mier2 protein_coding protein_coding MGP_WSBEiJ_T0025315.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79396712 79398431 - MGP_WSBEiJ_P0025315 Mier2 protein_coding protein_coding MGP_WSBEiJ_T0025316.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79397387 79398636 - Mier2 protein_coding retained_intron MGP_WSBEiJ_T0025317.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79398138 79401246 - Mier2 protein_coding retained_intron MGP_WSBEiJ_T0025318.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79398941 79400828 - Mier2 protein_coding processed_transcript MGP_WSBEiJ_T0025319.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79405278 79411419 - MGP_WSBEiJ_P0025319 Mier2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025320.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79405350 79411189 - MGP_WSBEiJ_P0025320 Mier2 protein_coding protein_coding MGP_WSBEiJ_T0025321.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79405357 79411426 - MGP_WSBEiJ_P0025321 Mier2 protein_coding protein_coding MGP_WSBEiJ_T0025322.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79405382 79407286 - MGP_WSBEiJ_P0025322 Mier2 protein_coding protein_coding MGP_WSBEiJ_T0025323.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79406034 79411382 - MGP_WSBEiJ_P0025323 Mier2 protein_coding protein_coding MGP_WSBEiJ_T0025324.1 MGP_WSBEiJ_G0016835.1 mouse_genomes_project 10 79406112 79410910 - MGP_WSBEiJ_P0025324 Mier2 protein_coding protein_coding MGP_WSBEiJ_T0026558.1 MGP_WSBEiJ_G0017175.1 mouse_genomes_project 10 125140839 125229831 - MGP_WSBEiJ_P0026558 Mon2 protein_coding protein_coding MGP_WSBEiJ_T0026559.1 MGP_WSBEiJ_G0017175.1 mouse_genomes_project 10 125140839 125229831 - MGP_WSBEiJ_P0026559 Mon2 protein_coding protein_coding MGP_WSBEiJ_T0026560.1 MGP_WSBEiJ_G0017175.1 mouse_genomes_project 10 125140839 125229831 - MGP_WSBEiJ_P0026560 Mon2 protein_coding protein_coding MGP_WSBEiJ_T0006033.1 MGP_WSBEiJ_G0005047.1 mouse_genomes_project 10 86951594 86960802 + lincRNA lincRNA MGP_WSBEiJ_T0009485.1 MGP_WSBEiJ_G0007642.1 mouse_genomes_project 10 125133507 125133592 - Mirlet7i miRNA miRNA MGP_WSBEiJ_T0002979.1 MGP_WSBEiJ_G0002791.1 mouse_genomes_project 10 75903693 75905409 + Gm16240 antisense antisense MGP_WSBEiJ_T0009435.1 MGP_WSBEiJ_G0007592.1 mouse_genomes_project 10 58817801 58817859 + Mir6906 miRNA miRNA MGP_WSBEiJ_T0009487.1 MGP_WSBEiJ_G0007644.1 mouse_genomes_project 10 128305351 128305424 + Gm22183 miRNA miRNA MGP_WSBEiJ_T0098878.1 MGP_WSBEiJ_G0037541.1 mouse_genomes_project 10 112925250 112925394 + Gm25117 snoRNA snoRNA MGP_WSBEiJ_T0026437.1 MGP_WSBEiJ_G0017138.1 mouse_genomes_project 10 118866719 118879595 - MGP_WSBEiJ_P0026437 Cct2 protein_coding protein_coding MGP_WSBEiJ_T0024100.1 MGP_WSBEiJ_G0016483.1 mouse_genomes_project 10 21567362 21568406 + MGP_WSBEiJ_P0024100 Taar4 protein_coding protein_coding MGP_WSBEiJ_T0025921.1 MGP_WSBEiJ_G0016986.1 mouse_genomes_project 10 85103148 85204656 + MGP_WSBEiJ_P0025921 Ric8b protein_coding protein_coding MGP_WSBEiJ_T0025922.1 MGP_WSBEiJ_G0016986.1 mouse_genomes_project 10 85103188 85204656 + MGP_WSBEiJ_P0025922 Ric8b protein_coding protein_coding MGP_WSBEiJ_T0006018.1 MGP_WSBEiJ_G0005035.1 mouse_genomes_project 10 65995203 65997891 + Gm26576 lincRNA lincRNA MGP_WSBEiJ_T0025068.1 MGP_WSBEiJ_G0016755.1 mouse_genomes_project 10 75181186 75188603 - MGP_WSBEiJ_P0025068 Susd2 protein_coding protein_coding MGP_WSBEiJ_T0025069.1 MGP_WSBEiJ_G0016755.1 mouse_genomes_project 10 75181186 75188603 - MGP_WSBEiJ_P0025069 Susd2 protein_coding protein_coding MGP_WSBEiJ_T0026543.1 MGP_WSBEiJ_G0017172.1 mouse_genomes_project 10 124218828 124234593 - MGP_WSBEiJ_P0026543 Tmem5 protein_coding protein_coding MGP_WSBEiJ_T0026544.1 MGP_WSBEiJ_G0017172.1 mouse_genomes_project 10 124221539 124234378 - MGP_WSBEiJ_P0026544 Tmem5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026545.1 MGP_WSBEiJ_G0017172.1 mouse_genomes_project 10 124221961 124226611 - Tmem5 protein_coding retained_intron MGP_WSBEiJ_T0026546.1 MGP_WSBEiJ_G0017172.1 mouse_genomes_project 10 124225866 124227927 - Tmem5 protein_coding retained_intron MGP_WSBEiJ_T0026547.1 MGP_WSBEiJ_G0017172.1 mouse_genomes_project 10 124226243 124233358 - Tmem5 protein_coding retained_intron MGP_WSBEiJ_T0026548.1 MGP_WSBEiJ_G0017172.1 mouse_genomes_project 10 124233277 124234348 - Tmem5 protein_coding processed_transcript MGP_WSBEiJ_T0025589.1 MGP_WSBEiJ_G0016898.1 mouse_genomes_project 10 80539240 80547610 - MGP_WSBEiJ_P0025589 Abhd17a protein_coding protein_coding MGP_WSBEiJ_T0025590.1 MGP_WSBEiJ_G0016898.1 mouse_genomes_project 10 80539241 80547593 - MGP_WSBEiJ_P0025590 Abhd17a protein_coding protein_coding MGP_WSBEiJ_T0025591.1 MGP_WSBEiJ_G0016898.1 mouse_genomes_project 10 80539242 80542211 - MGP_WSBEiJ_P0025591 Abhd17a protein_coding protein_coding MGP_WSBEiJ_T0025592.1 MGP_WSBEiJ_G0016898.1 mouse_genomes_project 10 80542265 80547584 - MGP_WSBEiJ_P0025592 Abhd17a protein_coding protein_coding MGP_WSBEiJ_T0100446.1 MGP_WSBEiJ_G0038905.1 mouse_genomes_project 10 4521963 4553153 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0025383.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79735742 79751510 - MGP_WSBEiJ_P0025383 Plppr3 protein_coding protein_coding MGP_WSBEiJ_T0025385.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79740470 79751306 - Plppr3 protein_coding retained_intron MGP_WSBEiJ_T0025386.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79740470 79751510 - Plppr3 protein_coding retained_intron MGP_WSBEiJ_T0025387.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79740470 79751574 - MGP_WSBEiJ_P0025387 Plppr3 protein_coding protein_coding MGP_WSBEiJ_T0025388.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79742101 79742971 - Plppr3 protein_coding retained_intron MGP_WSBEiJ_T0025389.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79742121 79751164 - MGP_WSBEiJ_P0025389 Plppr3 protein_coding protein_coding MGP_WSBEiJ_T0025390.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79742127 79751348 - MGP_WSBEiJ_P0025390 Plppr3 protein_coding protein_coding MGP_WSBEiJ_T0025391.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79742543 79751329 - Plppr3 protein_coding processed_transcript MGP_WSBEiJ_T0025392.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79742597 79751339 - MGP_WSBEiJ_P0025392 Plppr3 protein_coding protein_coding MGP_WSBEiJ_T0025393.1 MGP_WSBEiJ_G0016854.1 mouse_genomes_project 10 79743148 79751310 - MGP_WSBEiJ_P0025393 Plppr3 protein_coding protein_coding MGP_WSBEiJ_T0026038.1 MGP_WSBEiJ_G0017018.1 mouse_genomes_project 10 88866110 88963185 - MGP_WSBEiJ_P0026038 Mybpc1 protein_coding protein_coding MGP_WSBEiJ_T0026039.1 MGP_WSBEiJ_G0017018.1 mouse_genomes_project 10 88866113 88870976 - Mybpc1 protein_coding retained_intron MGP_WSBEiJ_T0026040.1 MGP_WSBEiJ_G0017018.1 mouse_genomes_project 10 88866171 88963058 - MGP_WSBEiJ_P0026040 Mybpc1 protein_coding protein_coding MGP_WSBEiJ_T0026041.1 MGP_WSBEiJ_G0017018.1 mouse_genomes_project 10 88867218 88885189 - MGP_WSBEiJ_P0026041 Mybpc1 protein_coding protein_coding MGP_WSBEiJ_T0026042.1 MGP_WSBEiJ_G0017018.1 mouse_genomes_project 10 88874000 88885241 - Mybpc1 protein_coding retained_intron MGP_WSBEiJ_T0026043.1 MGP_WSBEiJ_G0017018.1 mouse_genomes_project 10 88874091 88907514 - MGP_WSBEiJ_P0026043 Mybpc1 protein_coding protein_coding MGP_WSBEiJ_T0100453.1 MGP_WSBEiJ_G0038912.1 mouse_genomes_project 10 107700392 107700859 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0024665.1 MGP_WSBEiJ_G0016673.1 mouse_genomes_project 10 60089366 60095545 + MGP_WSBEiJ_P0024665 Prf1 protein_coding protein_coding MGP_WSBEiJ_T0026357.1 MGP_WSBEiJ_G0017108.1 mouse_genomes_project 10 112916951 112940565 + MGP_WSBEiJ_P0026357 Nap1l1 protein_coding protein_coding MGP_WSBEiJ_T0026358.1 MGP_WSBEiJ_G0017108.1 mouse_genomes_project 10 112924376 112941817 + MGP_WSBEiJ_P0026358 Nap1l1 protein_coding protein_coding MGP_WSBEiJ_T0026600.1 MGP_WSBEiJ_G0017190.1 mouse_genomes_project 10 129419056 129433323 + MGP_WSBEiJ_P0026600 Agap2 protein_coding protein_coding MGP_WSBEiJ_T0024586.1 MGP_WSBEiJ_G0016657.1 mouse_genomes_project 10 58542907 58562644 + MGP_WSBEiJ_P0024586 Dnajb12 protein_coding protein_coding MGP_WSBEiJ_T0024587.1 MGP_WSBEiJ_G0016657.1 mouse_genomes_project 10 58542915 58561356 + MGP_WSBEiJ_P0024587 Dnajb12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024588.1 MGP_WSBEiJ_G0016657.1 mouse_genomes_project 10 58542926 58562638 + MGP_WSBEiJ_P0024588 Dnajb12 protein_coding protein_coding MGP_WSBEiJ_T0024589.1 MGP_WSBEiJ_G0016657.1 mouse_genomes_project 10 58542969 58560117 + MGP_WSBEiJ_P0024589 Dnajb12 protein_coding protein_coding MGP_WSBEiJ_T0024590.1 MGP_WSBEiJ_G0016657.1 mouse_genomes_project 10 58542977 58561863 + MGP_WSBEiJ_P0024590 Dnajb12 protein_coding protein_coding MGP_WSBEiJ_T0025363.1 MGP_WSBEiJ_G0016850.1 mouse_genomes_project 10 79651633 79659166 - MGP_WSBEiJ_P0025363 Prss57 protein_coding protein_coding MGP_WSBEiJ_T0025364.1 MGP_WSBEiJ_G0016850.1 mouse_genomes_project 10 79651635 79661142 - MGP_WSBEiJ_P0025364 Prss57 protein_coding protein_coding MGP_WSBEiJ_T0025365.1 MGP_WSBEiJ_G0016850.1 mouse_genomes_project 10 79653077 79654732 - MGP_WSBEiJ_P0025365 Prss57 protein_coding protein_coding MGP_WSBEiJ_T0025366.1 MGP_WSBEiJ_G0016850.1 mouse_genomes_project 10 79653255 79654750 - MGP_WSBEiJ_P0025366 Prss57 protein_coding protein_coding MGP_WSBEiJ_T0025082.1 MGP_WSBEiJ_G0016761.1 mouse_genomes_project 10 75374838 75388940 - MGP_WSBEiJ_P0025082 Gstt4 protein_coding protein_coding MGP_WSBEiJ_T0025083.1 MGP_WSBEiJ_G0016761.1 mouse_genomes_project 10 75374839 75388924 - MGP_WSBEiJ_P0025083 Gstt4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098859.1 MGP_WSBEiJ_G0037522.1 mouse_genomes_project 10 65529828 65529958 + Gm22594 snoRNA snoRNA MGP_WSBEiJ_T0024753.1 MGP_WSBEiJ_G0016698.1 mouse_genomes_project 10 61465375 61490477 - MGP_WSBEiJ_P0024753 Ddx21 protein_coding protein_coding MGP_WSBEiJ_T0009424.1 MGP_WSBEiJ_G0007581.1 mouse_genomes_project 10 22592990 22593060 + Mir6905 miRNA miRNA MGP_WSBEiJ_T0011093.1 MGP_WSBEiJ_G0009250.1 mouse_genomes_project 10 116921856 116922162 - Gm22794 misc_RNA misc_RNA MGP_WSBEiJ_T0026251.1 MGP_WSBEiJ_G0017074.1 mouse_genomes_project 10 99991142 99995262 - MGP_WSBEiJ_P0026251 Phxr2 protein_coding protein_coding MGP_WSBEiJ_T0003007.1 MGP_WSBEiJ_G0002813.1 mouse_genomes_project 10 88132274 88134260 - Igf1os antisense antisense MGP_WSBEiJ_T0003008.1 MGP_WSBEiJ_G0002813.1 mouse_genomes_project 10 88132286 88171316 - Igf1os antisense antisense MGP_WSBEiJ_T0025270.1 MGP_WSBEiJ_G0016812.1 mouse_genomes_project 10 77951389 78012655 - MGP_WSBEiJ_P0025270 Trappc10 protein_coding protein_coding MGP_WSBEiJ_T0000784.1 MGP_WSBEiJ_G0000724.1 mouse_genomes_project 10 19540996 19543067 - TEC TEC MGP_WSBEiJ_T0026326.1 MGP_WSBEiJ_G0017099.1 mouse_genomes_project 10 109460175 109583492 + MGP_WSBEiJ_P0026326 Ppp1r12a protein_coding unknown_likely_coding MGP_WSBEiJ_T0026327.1 MGP_WSBEiJ_G0017099.1 mouse_genomes_project 10 109460175 109581079 + MGP_WSBEiJ_P0026327 Ppp1r12a protein_coding protein_coding MGP_WSBEiJ_T0024321.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39892723 39903473 + MGP_WSBEiJ_P0024321 Mical1 protein_coding protein_coding MGP_WSBEiJ_T0024322.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39892723 39903471 + MGP_WSBEiJ_P0024322 Mical1 protein_coding protein_coding MGP_WSBEiJ_T0024323.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39892745 39901631 + Mical1 protein_coding retained_intron MGP_WSBEiJ_T0024324.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39892777 39903473 + MGP_WSBEiJ_P0024324 Mical1 protein_coding protein_coding MGP_WSBEiJ_T0024325.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39892786 39903473 + MGP_WSBEiJ_P0024325 Mical1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024326.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39893488 39894595 + MGP_WSBEiJ_P0024326 Mical1 protein_coding protein_coding MGP_WSBEiJ_T0024327.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39894887 39897571 + Mical1 protein_coding retained_intron MGP_WSBEiJ_T0024328.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39896397 39897564 + Mical1 protein_coding retained_intron MGP_WSBEiJ_T0024329.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39898112 39899122 + Mical1 protein_coding retained_intron MGP_WSBEiJ_T0024330.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39900479 39901477 + Mical1 protein_coding retained_intron MGP_WSBEiJ_T0024332.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39902516 39903161 + Mical1 protein_coding retained_intron MGP_WSBEiJ_T0024333.1 MGP_WSBEiJ_G0016575.1 mouse_genomes_project 10 39902777 39903471 + Mical1 protein_coding retained_intron MGP_WSBEiJ_T0024156.1 MGP_WSBEiJ_G0016507.1 mouse_genomes_project 10 24737498 24745991 - Lama2 protein_coding retained_intron MGP_WSBEiJ_T0024157.1 MGP_WSBEiJ_G0016507.1 mouse_genomes_project 10 24738744 25396530 - MGP_WSBEiJ_P0024157 Lama2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024158.1 MGP_WSBEiJ_G0016507.1 mouse_genomes_project 10 24738747 25396577 - MGP_WSBEiJ_P0024158 Lama2 protein_coding protein_coding MGP_WSBEiJ_T0024159.1 MGP_WSBEiJ_G0016507.1 mouse_genomes_project 10 24954014 25396530 - MGP_WSBEiJ_P0024159 Lama2 protein_coding protein_coding MGP_WSBEiJ_T0024160.1 MGP_WSBEiJ_G0016507.1 mouse_genomes_project 10 25118261 25396600 - Lama2 protein_coding retained_intron MGP_WSBEiJ_T0024161.1 MGP_WSBEiJ_G0016507.1 mouse_genomes_project 10 25193022 25399488 - Lama2 protein_coding retained_intron MGP_WSBEiJ_T0024162.1 MGP_WSBEiJ_G0016507.1 mouse_genomes_project 10 25245402 25396600 - Lama2 protein_coding processed_transcript MGP_WSBEiJ_T0026412.1 MGP_WSBEiJ_G0017131.1 mouse_genomes_project 10 118174872 118233580 - MGP_WSBEiJ_P0026412 Kcnmb4 protein_coding protein_coding MGP_WSBEiJ_T0026413.1 MGP_WSBEiJ_G0017131.1 mouse_genomes_project 10 118192922 118233137 - MGP_WSBEiJ_P0026413 Kcnmb4 protein_coding protein_coding MGP_WSBEiJ_T0026414.1 MGP_WSBEiJ_G0017131.1 mouse_genomes_project 10 118222317 118233124 - MGP_WSBEiJ_P0026414 Kcnmb4 protein_coding protein_coding MGP_WSBEiJ_T0026898.1 MGP_WSBEiJ_G0017315.1 mouse_genomes_project 10 132727455 132745460 - MGP_WSBEiJ_P0026898 protein_coding protein_coding MGP_WSBEiJ_T0002965.1 MGP_WSBEiJ_G0002780.1 mouse_genomes_project 10 61209218 61219323 + Hk1os antisense antisense MGP_WSBEiJ_T0002966.1 MGP_WSBEiJ_G0002780.1 mouse_genomes_project 10 61209569 61219998 + Hk1os antisense antisense MGP_WSBEiJ_T0002967.1 MGP_WSBEiJ_G0002780.1 mouse_genomes_project 10 61209584 61232840 + Hk1os antisense antisense MGP_WSBEiJ_T0025201.1 MGP_WSBEiJ_G0016794.1 mouse_genomes_project 10 77293328 77329764 + MGP_WSBEiJ_P0025201 Sumo3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025202.1 MGP_WSBEiJ_G0016794.1 mouse_genomes_project 10 77293340 77305459 + MGP_WSBEiJ_P0025202 Sumo3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025203.1 MGP_WSBEiJ_G0016794.1 mouse_genomes_project 10 77293356 77305056 + MGP_WSBEiJ_P0025203 Sumo3 protein_coding protein_coding MGP_WSBEiJ_T0025204.1 MGP_WSBEiJ_G0016794.1 mouse_genomes_project 10 77293356 77305392 + MGP_WSBEiJ_P0025204 Sumo3 protein_coding protein_coding MGP_WSBEiJ_T0025205.1 MGP_WSBEiJ_G0016794.1 mouse_genomes_project 10 77293452 77305007 + MGP_WSBEiJ_P0025205 Sumo3 protein_coding protein_coding MGP_WSBEiJ_T0025206.1 MGP_WSBEiJ_G0016794.1 mouse_genomes_project 10 77293702 77306171 + MGP_WSBEiJ_P0025206 Sumo3 protein_coding protein_coding MGP_WSBEiJ_T0025207.1 MGP_WSBEiJ_G0016794.1 mouse_genomes_project 10 77297433 77305647 + MGP_WSBEiJ_P0025207 Sumo3 protein_coding protein_coding MGP_WSBEiJ_T0025208.1 MGP_WSBEiJ_G0016794.1 mouse_genomes_project 10 77302723 77304808 + Sumo3 protein_coding processed_transcript MGP_WSBEiJ_T0024462.1 MGP_WSBEiJ_G0016613.1 mouse_genomes_project 10 50192018 50200832 + MGP_WSBEiJ_P0024462 Lilrb4a protein_coding protein_coding MGP_WSBEiJ_T0026442.1 MGP_WSBEiJ_G0017142.1 mouse_genomes_project 10 119077740 119079965 + MGP_WSBEiJ_P0026442 Gm10936 protein_coding protein_coding MGP_WSBEiJ_T0024112.1 MGP_WSBEiJ_G0016494.1 mouse_genomes_project 10 22259870 22263983 + MGP_WSBEiJ_P0024112 Ctgf protein_coding protein_coding MGP_WSBEiJ_T0024113.1 MGP_WSBEiJ_G0016494.1 mouse_genomes_project 10 22260154 22263988 + MGP_WSBEiJ_P0024113 Ctgf protein_coding protein_coding MGP_WSBEiJ_T0024114.1 MGP_WSBEiJ_G0016494.1 mouse_genomes_project 10 22260208 22260799 + MGP_WSBEiJ_P0024114 Ctgf protein_coding protein_coding MGP_WSBEiJ_T0006011.1 MGP_WSBEiJ_G0005032.1 mouse_genomes_project 10 65169537 65311218 - 1700023F02Rik lincRNA lincRNA MGP_WSBEiJ_T0006012.1 MGP_WSBEiJ_G0005032.1 mouse_genomes_project 10 65169537 65172970 - 1700023F02Rik lincRNA lincRNA MGP_WSBEiJ_T0006013.1 MGP_WSBEiJ_G0005032.1 mouse_genomes_project 10 65169541 65172975 - 1700023F02Rik lincRNA lincRNA MGP_WSBEiJ_T0006014.1 MGP_WSBEiJ_G0005032.1 mouse_genomes_project 10 65169541 65172975 - 1700023F02Rik lincRNA lincRNA MGP_WSBEiJ_T0006015.1 MGP_WSBEiJ_G0005032.1 mouse_genomes_project 10 65169608 65171996 - 1700023F02Rik lincRNA lincRNA MGP_WSBEiJ_T0026715.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130517805 130525475 + MGP_WSBEiJ_P0026715 Atp5b protein_coding protein_coding MGP_WSBEiJ_T0026716.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130517838 130518619 + Atp5b protein_coding processed_transcript MGP_WSBEiJ_T0026717.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130518965 130520481 + Atp5b protein_coding retained_intron MGP_WSBEiJ_T0026718.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130520277 130525244 + Atp5b protein_coding retained_intron MGP_WSBEiJ_T0026719.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130520761 130524236 + Atp5b protein_coding processed_transcript MGP_WSBEiJ_T0026720.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130522764 130524135 + Atp5b protein_coding retained_intron MGP_WSBEiJ_T0026721.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130523574 130524765 + Atp5b protein_coding retained_intron MGP_WSBEiJ_T0026722.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130523635 130525357 + Atp5b protein_coding processed_transcript MGP_WSBEiJ_T0026723.1 MGP_WSBEiJ_G0017229.1 mouse_genomes_project 10 130524124 130525356 + Atp5b protein_coding processed_transcript MGP_WSBEiJ_T0024205.1 MGP_WSBEiJ_G0016524.1 mouse_genomes_project 10 29208985 29257808 - MGP_WSBEiJ_P0024205 Tpd52l1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024206.1 MGP_WSBEiJ_G0016524.1 mouse_genomes_project 10 29208985 29257246 - MGP_WSBEiJ_P0024206 Tpd52l1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024207.1 MGP_WSBEiJ_G0016524.1 mouse_genomes_project 10 29208995 29332044 - MGP_WSBEiJ_P0024207 Tpd52l1 protein_coding protein_coding MGP_WSBEiJ_T0024412.1 MGP_WSBEiJ_G0016593.1 mouse_genomes_project 10 41666950 41668811 + MGP_WSBEiJ_P0024412 9030612E09Rik protein_coding protein_coding MGP_WSBEiJ_T0024020.1 MGP_WSBEiJ_G0016456.1 mouse_genomes_project 10 17360918 17571129 + MGP_WSBEiJ_P0024020 Map3k5 protein_coding protein_coding MGP_WSBEiJ_T0024021.1 MGP_WSBEiJ_G0016456.1 mouse_genomes_project 10 17360972 17570045 + MGP_WSBEiJ_P0024021 Map3k5 protein_coding protein_coding MGP_WSBEiJ_T0024022.1 MGP_WSBEiJ_G0016456.1 mouse_genomes_project 10 17361703 17528067 + MGP_WSBEiJ_P0024022 Map3k5 protein_coding protein_coding MGP_WSBEiJ_T0024023.1 MGP_WSBEiJ_G0016456.1 mouse_genomes_project 10 17377549 17446953 + MGP_WSBEiJ_P0024023 Map3k5 protein_coding protein_coding MGP_WSBEiJ_T0024024.1 MGP_WSBEiJ_G0016456.1 mouse_genomes_project 10 17527433 17533337 + Map3k5 protein_coding processed_transcript MGP_WSBEiJ_T0024025.1 MGP_WSBEiJ_G0016456.1 mouse_genomes_project 10 17553585 17556469 + Map3k5 protein_coding retained_intron MGP_WSBEiJ_T0024026.1 MGP_WSBEiJ_G0016456.1 mouse_genomes_project 10 17556468 17566952 + Map3k5 protein_coding retained_intron MGP_WSBEiJ_T0024014.1 MGP_WSBEiJ_G0016453.1 mouse_genomes_project 10 17143874 17191325 + MGP_WSBEiJ_P0024014 Il20ra protein_coding protein_coding MGP_WSBEiJ_T0016532.1 MGP_WSBEiJ_G0014556.1 mouse_genomes_project 10 86958113 86959091 - Gm15344 processed_transcript processed_transcript MGP_WSBEiJ_T0026862.1 MGP_WSBEiJ_G0017289.1 mouse_genomes_project 10 131993552 131994491 + MGP_WSBEiJ_P0026862 Gm44444 protein_coding protein_coding MGP_WSBEiJ_T0098827.1 MGP_WSBEiJ_G0037490.1 mouse_genomes_project 10 5874319 5874456 - Gm25410 snoRNA snoRNA MGP_WSBEiJ_T0002541.1 MGP_WSBEiJ_G0002448.1 mouse_genomes_project 10 32562352 32565382 + MGP_WSBEiJ_P0002541 TR_V_gene TR_V_gene MGP_WSBEiJ_T0026692.1 MGP_WSBEiJ_G0017218.1 mouse_genomes_project 10 130139444 130145381 - MGP_WSBEiJ_P0026692 Gpr182 protein_coding protein_coding MGP_WSBEiJ_T0097622.1 MGP_WSBEiJ_G0036285.1 mouse_genomes_project 10 29027440 29027547 - Gm23790 snRNA snRNA MGP_WSBEiJ_T0025043.1 MGP_WSBEiJ_G0016752.1 mouse_genomes_project 10 75086951 75097123 - MGP_WSBEiJ_P0025043 Lrrc75b protein_coding protein_coding MGP_WSBEiJ_T0025333.1 MGP_WSBEiJ_G0016839.1 mouse_genomes_project 10 79502190 79509112 - MGP_WSBEiJ_P0025333 Odf3l2 protein_coding protein_coding MGP_WSBEiJ_T0025494.1 MGP_WSBEiJ_G0016878.1 mouse_genomes_project 10 80087587 80098138 + MGP_WSBEiJ_P0025494 Efna2 protein_coding protein_coding MGP_WSBEiJ_T0002996.1 MGP_WSBEiJ_G0002804.1 mouse_genomes_project 10 81622520 81625849 - Gm15917 antisense antisense MGP_WSBEiJ_T0003018.1 MGP_WSBEiJ_G0002819.1 mouse_genomes_project 10 116403127 116430489 + 4930473D10Rik antisense antisense MGP_WSBEiJ_T0025087.1 MGP_WSBEiJ_G0016765.1 mouse_genomes_project 10 75472061 75496545 - MGP_WSBEiJ_P0025087 Smarcb1 protein_coding protein_coding MGP_WSBEiJ_T0025088.1 MGP_WSBEiJ_G0016765.1 mouse_genomes_project 10 75472065 75489110 - Smarcb1 protein_coding retained_intron MGP_WSBEiJ_T0025089.1 MGP_WSBEiJ_G0016765.1 mouse_genomes_project 10 75472067 75491482 - Smarcb1 protein_coding retained_intron MGP_WSBEiJ_T0025090.1 MGP_WSBEiJ_G0016765.1 mouse_genomes_project 10 75472069 75496542 - MGP_WSBEiJ_P0025090 Smarcb1 protein_coding protein_coding MGP_WSBEiJ_T0025091.1 MGP_WSBEiJ_G0016765.1 mouse_genomes_project 10 75472816 75496517 - MGP_WSBEiJ_P0025091 Smarcb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025092.1 MGP_WSBEiJ_G0016765.1 mouse_genomes_project 10 75485240 75490074 - MGP_WSBEiJ_P0025092 Smarcb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025026.1 MGP_WSBEiJ_G0016747.1 mouse_genomes_project 10 74718872 74826144 + MGP_WSBEiJ_P0025026 Specc1l protein_coding protein_coding MGP_WSBEiJ_T0025027.1 MGP_WSBEiJ_G0016747.1 mouse_genomes_project 10 74740053 74826144 + MGP_WSBEiJ_P0025027 Specc1l protein_coding protein_coding MGP_WSBEiJ_T0025868.1 MGP_WSBEiJ_G0016971.1 mouse_genomes_project 10 82897356 82914372 - MGP_WSBEiJ_P0025868 Nfyb protein_coding protein_coding MGP_WSBEiJ_T0025869.1 MGP_WSBEiJ_G0016971.1 mouse_genomes_project 10 82897942 82914329 - Nfyb protein_coding retained_intron MGP_WSBEiJ_T0025870.1 MGP_WSBEiJ_G0016971.1 mouse_genomes_project 10 82899130 82900316 - Nfyb protein_coding retained_intron MGP_WSBEiJ_T0025871.1 MGP_WSBEiJ_G0016971.1 mouse_genomes_project 10 82899822 82901207 - Nfyb protein_coding retained_intron MGP_WSBEiJ_T0025872.1 MGP_WSBEiJ_G0016971.1 mouse_genomes_project 10 82901072 82913891 - Nfyb protein_coding processed_transcript MGP_WSBEiJ_T0025873.1 MGP_WSBEiJ_G0016971.1 mouse_genomes_project 10 82901174 82913874 - MGP_WSBEiJ_P0025873 Nfyb protein_coding protein_coding MGP_WSBEiJ_T0025874.1 MGP_WSBEiJ_G0016971.1 mouse_genomes_project 10 82904273 82906513 - Nfyb protein_coding retained_intron MGP_WSBEiJ_T0026255.1 MGP_WSBEiJ_G0017075.1 mouse_genomes_project 10 100144814 100149066 + MGP_WSBEiJ_P0026255 Dusp6 protein_coding protein_coding MGP_WSBEiJ_T0025958.1 MGP_WSBEiJ_G0016999.1 mouse_genomes_project 10 86548064 86610139 + MGP_WSBEiJ_P0025958 Timp3 protein_coding protein_coding MGP_WSBEiJ_T0025959.1 MGP_WSBEiJ_G0016999.1 mouse_genomes_project 10 86548246 86554441 + Timp3 protein_coding processed_transcript MGP_WSBEiJ_T0025960.1 MGP_WSBEiJ_G0016999.1 mouse_genomes_project 10 86548248 86575244 + Timp3 protein_coding processed_transcript MGP_WSBEiJ_T0025961.1 MGP_WSBEiJ_G0016999.1 mouse_genomes_project 10 86550525 86604622 + MGP_WSBEiJ_P0025961 Timp3 protein_coding protein_coding MGP_WSBEiJ_T0100449.1 MGP_WSBEiJ_G0038908.1 mouse_genomes_project 10 78301665 78302603 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097608.1 MGP_WSBEiJ_G0036271.1 mouse_genomes_project 10 1059405 1059562 + Gm25515 snRNA snRNA MGP_WSBEiJ_T0025915.1 MGP_WSBEiJ_G0016985.1 mouse_genomes_project 10 84936693 85091669 + MGP_WSBEiJ_P0025915 Rfx4 protein_coding protein_coding MGP_WSBEiJ_T0025916.1 MGP_WSBEiJ_G0016985.1 mouse_genomes_project 10 84937102 85092068 + MGP_WSBEiJ_P0025916 Rfx4 protein_coding protein_coding MGP_WSBEiJ_T0025917.1 MGP_WSBEiJ_G0016985.1 mouse_genomes_project 10 84942758 84995729 + Rfx4 protein_coding processed_transcript MGP_WSBEiJ_T0025918.1 MGP_WSBEiJ_G0016985.1 mouse_genomes_project 10 84942758 84995729 + Rfx4 protein_coding processed_transcript MGP_WSBEiJ_T0025919.1 MGP_WSBEiJ_G0016985.1 mouse_genomes_project 10 85020023 85054733 + Rfx4 protein_coding processed_transcript MGP_WSBEiJ_T0025920.1 MGP_WSBEiJ_G0016985.1 mouse_genomes_project 10 85020023 85092063 + MGP_WSBEiJ_P0025920 Rfx4 protein_coding protein_coding MGP_WSBEiJ_T0024476.1 MGP_WSBEiJ_G0016620.1 mouse_genomes_project 10 50977777 51070525 + MGP_WSBEiJ_P0024476 Dcbld1 protein_coding protein_coding MGP_WSBEiJ_T0024477.1 MGP_WSBEiJ_G0016620.1 mouse_genomes_project 10 50977791 51033879 + Dcbld1 protein_coding retained_intron MGP_WSBEiJ_T0024478.1 MGP_WSBEiJ_G0016620.1 mouse_genomes_project 10 50977795 51070527 + MGP_WSBEiJ_P0024478 Dcbld1 protein_coding protein_coding MGP_WSBEiJ_T0023936.1 MGP_WSBEiJ_G0016430.1 mouse_genomes_project 10 10827666 11067043 - MGP_WSBEiJ_P0023936 Aig1 protein_coding protein_coding MGP_WSBEiJ_T0023937.1 MGP_WSBEiJ_G0016430.1 mouse_genomes_project 10 10828281 11066885 - MGP_WSBEiJ_P0023937 Aig1 protein_coding protein_coding MGP_WSBEiJ_T0023938.1 MGP_WSBEiJ_G0016430.1 mouse_genomes_project 10 10832834 11067020 - MGP_WSBEiJ_P0023938 Aig1 protein_coding protein_coding MGP_WSBEiJ_T0023939.1 MGP_WSBEiJ_G0016430.1 mouse_genomes_project 10 10833971 11038869 - Aig1 protein_coding processed_transcript MGP_WSBEiJ_T0023940.1 MGP_WSBEiJ_G0016430.1 mouse_genomes_project 10 10991272 11058341 - Aig1 protein_coding retained_intron MGP_WSBEiJ_T0023941.1 MGP_WSBEiJ_G0016430.1 mouse_genomes_project 10 11021147 11067039 - Aig1 protein_coding retained_intron MGP_WSBEiJ_T0023942.1 MGP_WSBEiJ_G0016430.1 mouse_genomes_project 10 11023938 11066892 - Aig1 protein_coding processed_transcript MGP_WSBEiJ_T0026880.1 MGP_WSBEiJ_G0017302.1 mouse_genomes_project 10 132262143 132263070 - MGP_WSBEiJ_P0026880 Olfr803 protein_coding protein_coding MGP_WSBEiJ_T0009490.1 MGP_WSBEiJ_G0007647.1 mouse_genomes_project 10 129328160 129328281 + Mir546 miRNA miRNA MGP_WSBEiJ_T0026698.1 MGP_WSBEiJ_G0017222.1 mouse_genomes_project 10 130292154 130302209 + MGP_WSBEiJ_P0026698 BC089597 protein_coding protein_coding MGP_WSBEiJ_T0025328.1 MGP_WSBEiJ_G0016837.1 mouse_genomes_project 10 79469612 79476650 - MGP_WSBEiJ_P0025328 C2cd4c protein_coding protein_coding MGP_WSBEiJ_T0025329.1 MGP_WSBEiJ_G0016837.1 mouse_genomes_project 10 79469612 79476643 - MGP_WSBEiJ_P0025329 C2cd4c protein_coding protein_coding MGP_WSBEiJ_T0009458.1 MGP_WSBEiJ_G0007615.1 mouse_genomes_project 10 81096700 81096760 + Mir5615-2 miRNA miRNA MGP_WSBEiJ_T0023951.1 MGP_WSBEiJ_G0016433.1 mouse_genomes_project 10 11887386 11952743 - MGP_WSBEiJ_P0023951 Vta1 protein_coding protein_coding MGP_WSBEiJ_T0023952.1 MGP_WSBEiJ_G0016433.1 mouse_genomes_project 10 11887986 11952683 - MGP_WSBEiJ_P0023952 Vta1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023953.1 MGP_WSBEiJ_G0016433.1 mouse_genomes_project 10 11888294 11909968 - Vta1 protein_coding retained_intron MGP_WSBEiJ_T0023954.1 MGP_WSBEiJ_G0016433.1 mouse_genomes_project 10 11888419 11952642 - MGP_WSBEiJ_P0023954 Vta1 protein_coding protein_coding MGP_WSBEiJ_T0023955.1 MGP_WSBEiJ_G0016433.1 mouse_genomes_project 10 11888470 11930347 - MGP_WSBEiJ_P0023955 Vta1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023956.1 MGP_WSBEiJ_G0016433.1 mouse_genomes_project 10 11931134 11952648 - Vta1 protein_coding processed_transcript MGP_WSBEiJ_T0025125.1 MGP_WSBEiJ_G0016777.1 mouse_genomes_project 10 76085861 76095960 - MGP_WSBEiJ_P0025125 Ybey protein_coding protein_coding MGP_WSBEiJ_T0024636.1 MGP_WSBEiJ_G0016667.1 mouse_genomes_project 10 59449682 59491879 - MGP_WSBEiJ_P0024636 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024637.1 MGP_WSBEiJ_G0016667.1 mouse_genomes_project 10 59450289 59491954 - MGP_WSBEiJ_P0024637 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024638.1 MGP_WSBEiJ_G0016667.1 mouse_genomes_project 10 59450483 59458759 - protein_coding retained_intron MGP_WSBEiJ_T0024639.1 MGP_WSBEiJ_G0016667.1 mouse_genomes_project 10 59455303 59491890 - protein_coding processed_transcript MGP_WSBEiJ_T0097188.1 MGP_WSBEiJ_G0035869.1 mouse_genomes_project 10 130903199 130903330 + Gm26347 scaRNA scaRNA MGP_WSBEiJ_T0002950.1 MGP_WSBEiJ_G0002769.1 mouse_genomes_project 10 37831296 37833663 - Gm16364 antisense antisense MGP_WSBEiJ_T0002942.1 MGP_WSBEiJ_G0002762.1 mouse_genomes_project 10 11906925 11910025 + antisense antisense MGP_WSBEiJ_T0025663.1 MGP_WSBEiJ_G0016926.1 mouse_genomes_project 10 81097999 81117412 + MGP_WSBEiJ_P0025663 Map2k2 protein_coding protein_coding MGP_WSBEiJ_T0025664.1 MGP_WSBEiJ_G0016926.1 mouse_genomes_project 10 81098031 81116598 + MGP_WSBEiJ_P0025664 Map2k2 protein_coding protein_coding MGP_WSBEiJ_T0025665.1 MGP_WSBEiJ_G0016926.1 mouse_genomes_project 10 81098056 81116560 + MGP_WSBEiJ_P0025665 Map2k2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025666.1 MGP_WSBEiJ_G0016926.1 mouse_genomes_project 10 81098429 81111833 + MGP_WSBEiJ_P0025666 Map2k2 protein_coding protein_coding MGP_WSBEiJ_T0025667.1 MGP_WSBEiJ_G0016926.1 mouse_genomes_project 10 81111319 81112035 + Map2k2 protein_coding retained_intron MGP_WSBEiJ_T0025668.1 MGP_WSBEiJ_G0016926.1 mouse_genomes_project 10 81113561 81115270 + Map2k2 protein_coding retained_intron MGP_WSBEiJ_T0025669.1 MGP_WSBEiJ_G0016926.1 mouse_genomes_project 10 81114867 81116642 + Map2k2 protein_coding retained_intron MGP_WSBEiJ_T0026439.1 MGP_WSBEiJ_G0017140.1 mouse_genomes_project 10 119042914 119053087 - MGP_WSBEiJ_P0026439 Yeats4 protein_coding protein_coding MGP_WSBEiJ_T0023918.1 MGP_WSBEiJ_G0016426.1 mouse_genomes_project 10 10371848 10493711 - MGP_WSBEiJ_P0023918 Phactr2 protein_coding protein_coding MGP_WSBEiJ_T0023919.1 MGP_WSBEiJ_G0016426.1 mouse_genomes_project 10 10377483 10561625 - MGP_WSBEiJ_P0023919 Phactr2 protein_coding protein_coding MGP_WSBEiJ_T0023920.1 MGP_WSBEiJ_G0016426.1 mouse_genomes_project 10 10377483 10649591 - MGP_WSBEiJ_P0023920 Phactr2 protein_coding protein_coding MGP_WSBEiJ_T0023921.1 MGP_WSBEiJ_G0016426.1 mouse_genomes_project 10 10377485 10493840 - MGP_WSBEiJ_P0023921 Phactr2 protein_coding protein_coding MGP_WSBEiJ_T0023922.1 MGP_WSBEiJ_G0016426.1 mouse_genomes_project 10 10378346 10561842 - MGP_WSBEiJ_P0023922 Phactr2 protein_coding protein_coding MGP_WSBEiJ_T0023923.1 MGP_WSBEiJ_G0016426.1 mouse_genomes_project 10 10554279 10561603 - Phactr2 protein_coding processed_transcript MGP_WSBEiJ_T0026824.1 MGP_WSBEiJ_G0017268.1 mouse_genomes_project 10 131325969 131384155 + MGP_WSBEiJ_P0026824 Gm6563 protein_coding protein_coding MGP_WSBEiJ_T0000807.1 MGP_WSBEiJ_G0000746.1 mouse_genomes_project 10 122820935 122823033 + TEC TEC MGP_WSBEiJ_T0026373.1 MGP_WSBEiJ_G0017114.1 mouse_genomes_project 10 113722456 113779979 + MGP_WSBEiJ_P0026373 Caps2 protein_coding protein_coding MGP_WSBEiJ_T0026374.1 MGP_WSBEiJ_G0017114.1 mouse_genomes_project 10 113722456 113779540 + MGP_WSBEiJ_P0026374 Caps2 protein_coding protein_coding MGP_WSBEiJ_T0024382.1 MGP_WSBEiJ_G0016586.1 mouse_genomes_project 10 40748456 40920027 - MGP_WSBEiJ_P0024382 Lace1 protein_coding protein_coding MGP_WSBEiJ_T0024383.1 MGP_WSBEiJ_G0016586.1 mouse_genomes_project 10 40748464 40920041 - MGP_WSBEiJ_P0024383 Lace1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024384.1 MGP_WSBEiJ_G0016586.1 mouse_genomes_project 10 40749458 40856874 - MGP_WSBEiJ_P0024384 Lace1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098841.1 MGP_WSBEiJ_G0037504.1 mouse_genomes_project 10 25224191 25224263 + Gm23353 snoRNA snoRNA MGP_WSBEiJ_T0012198.1 MGP_WSBEiJ_G0010328.1 mouse_genomes_project 10 123027831 123028618 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098825.1 MGP_WSBEiJ_G0037488.1 mouse_genomes_project 10 1131791 1131923 + Gm25369 snoRNA snoRNA MGP_WSBEiJ_T0097631.1 MGP_WSBEiJ_G0036294.1 mouse_genomes_project 10 47270637 47270721 - Gm24256 snRNA snRNA MGP_WSBEiJ_T0006022.1 MGP_WSBEiJ_G0005039.1 mouse_genomes_project 10 77624420 77627134 + 1700009J07Rik lincRNA lincRNA MGP_WSBEiJ_T0006023.1 MGP_WSBEiJ_G0005039.1 mouse_genomes_project 10 77624423 77627131 + 1700009J07Rik lincRNA lincRNA MGP_WSBEiJ_T0006024.1 MGP_WSBEiJ_G0005039.1 mouse_genomes_project 10 77624431 77625539 + 1700009J07Rik lincRNA lincRNA MGP_WSBEiJ_T0002943.1 MGP_WSBEiJ_G0002763.1 mouse_genomes_project 10 12011978 12014604 - B230364G03Rik antisense antisense MGP_WSBEiJ_T0098880.1 MGP_WSBEiJ_G0037543.1 mouse_genomes_project 10 119009283 119009360 - Gm26311 snoRNA snoRNA MGP_WSBEiJ_T0002650.1 MGP_WSBEiJ_G0002534.1 mouse_genomes_project 10 32537934 32538214 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0025849.1 MGP_WSBEiJ_G0016967.1 mouse_genomes_project 10 82597689 82610603 - MGP_WSBEiJ_P0025849 Gm1553 protein_coding protein_coding MGP_WSBEiJ_T0026468.1 MGP_WSBEiJ_G0017149.1 mouse_genomes_project 10 119706500 119737886 - MGP_WSBEiJ_P0026468 Rap1b protein_coding protein_coding MGP_WSBEiJ_T0024694.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60948984 60952386 - MGP_WSBEiJ_P0024694 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024695.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60949537 60952281 - MGP_WSBEiJ_P0024695 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024696.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60949537 60952304 - MGP_WSBEiJ_P0024696 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024697.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60949537 60952386 - MGP_WSBEiJ_P0024697 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024698.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60949539 60952349 - MGP_WSBEiJ_P0024698 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024699.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60950162 60984625 - MGP_WSBEiJ_P0024699 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024700.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60950244 60976859 - MGP_WSBEiJ_P0024700 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024701.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60950245 60988822 - MGP_WSBEiJ_P0024701 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024702.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60950247 60951832 - MGP_WSBEiJ_P0024702 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024703.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60951275 60988826 - MGP_WSBEiJ_P0024703 2010107G23Rik protein_coding protein_coding MGP_WSBEiJ_T0024705.1 MGP_WSBEiJ_G0016687.1 mouse_genomes_project 10 60976673 60988836 - 2010107G23Rik protein_coding processed_transcript MGP_WSBEiJ_T0024048.1 MGP_WSBEiJ_G0016462.1 mouse_genomes_project 10 18417772 18549446 + MGP_WSBEiJ_P0024048 Ahi1 protein_coding protein_coding MGP_WSBEiJ_T0024049.1 MGP_WSBEiJ_G0016462.1 mouse_genomes_project 10 18508852 18549446 + MGP_WSBEiJ_P0024049 Ahi1 protein_coding protein_coding MGP_WSBEiJ_T0026440.1 MGP_WSBEiJ_G0017141.1 mouse_genomes_project 10 119060821 119067239 - MGP_WSBEiJ_P0026440 9530003J23Rik protein_coding protein_coding MGP_WSBEiJ_T0026441.1 MGP_WSBEiJ_G0017141.1 mouse_genomes_project 10 119062345 119067288 - MGP_WSBEiJ_P0026441 9530003J23Rik protein_coding protein_coding MGP_WSBEiJ_T0026632.1 MGP_WSBEiJ_G0017203.1 mouse_genomes_project 10 129691612 129703349 - MGP_WSBEiJ_P0026632 Gli1 protein_coding protein_coding MGP_WSBEiJ_T0009453.1 MGP_WSBEiJ_G0007610.1 mouse_genomes_project 10 80198522 80198591 + Mir6911 miRNA miRNA MGP_WSBEiJ_T0024472.1 MGP_WSBEiJ_G0016619.1 mouse_genomes_project 10 50780766 50941140 - MGP_WSBEiJ_P0024472 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024473.1 MGP_WSBEiJ_G0016619.1 mouse_genomes_project 10 50780971 50941428 - MGP_WSBEiJ_P0024473 protein_coding protein_coding MGP_WSBEiJ_T0024474.1 MGP_WSBEiJ_G0016619.1 mouse_genomes_project 10 50781061 50941140 - MGP_WSBEiJ_P0024474 protein_coding protein_coding MGP_WSBEiJ_T0024475.1 MGP_WSBEiJ_G0016619.1 mouse_genomes_project 10 50781061 50941140 - MGP_WSBEiJ_P0024475 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0016502.1 MGP_WSBEiJ_G0014549.1 mouse_genomes_project 10 22211492 22212391 - Gm15270 processed_transcript processed_transcript MGP_WSBEiJ_T0016503.1 MGP_WSBEiJ_G0014549.1 mouse_genomes_project 10 22211498 22260246 - Gm15270 processed_transcript processed_transcript MGP_WSBEiJ_T0016504.1 MGP_WSBEiJ_G0014549.1 mouse_genomes_project 10 22244507 22258194 - Gm15270 processed_transcript processed_transcript MGP_WSBEiJ_T0016505.1 MGP_WSBEiJ_G0014549.1 mouse_genomes_project 10 22259678 22261537 - Gm15270 processed_transcript processed_transcript MGP_WSBEiJ_T0012168.1 MGP_WSBEiJ_G0010298.1 mouse_genomes_project 10 51145654 51146089 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026270.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101520809 101534306 + MGP_WSBEiJ_P0026270 1700017N19Rik protein_coding protein_coding MGP_WSBEiJ_T0026271.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101522639 101550322 + MGP_WSBEiJ_P0026271 1700017N19Rik protein_coding protein_coding MGP_WSBEiJ_T0026272.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101522659 101550408 + MGP_WSBEiJ_P0026272 1700017N19Rik protein_coding protein_coding MGP_WSBEiJ_T0026273.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101522665 101543548 + MGP_WSBEiJ_P0026273 1700017N19Rik protein_coding protein_coding MGP_WSBEiJ_T0026274.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101522670 101550402 + MGP_WSBEiJ_P0026274 1700017N19Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026275.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101522674 101550402 + MGP_WSBEiJ_P0026275 1700017N19Rik protein_coding protein_coding MGP_WSBEiJ_T0026276.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101522685 101550324 + MGP_WSBEiJ_P0026276 1700017N19Rik protein_coding protein_coding MGP_WSBEiJ_T0026277.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101522697 101550412 + MGP_WSBEiJ_P0026277 1700017N19Rik protein_coding protein_coding MGP_WSBEiJ_T0026278.1 MGP_WSBEiJ_G0017082.1 mouse_genomes_project 10 101540183 101550319 + MGP_WSBEiJ_P0026278 1700017N19Rik protein_coding protein_coding MGP_WSBEiJ_T0000311.1 MGP_WSBEiJ_G0000259.1 mouse_genomes_project 10 85214727 85214795 + mt-Tp Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0100461.1 MGP_WSBEiJ_G0038920.1 mouse_genomes_project 10 132596959 132597148 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0025787.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81624469 81640373 + Tle2 protein_coding retained_intron MGP_WSBEiJ_T0025788.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81624642 81625741 + MGP_WSBEiJ_P0025788 Tle2 protein_coding protein_coding MGP_WSBEiJ_T0025789.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81624647 81630234 + MGP_WSBEiJ_P0025789 Tle2 protein_coding protein_coding MGP_WSBEiJ_T0025790.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81625168 81640377 + Tle2 protein_coding retained_intron MGP_WSBEiJ_T0025791.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81625170 81640380 + MGP_WSBEiJ_P0025791 Tle2 protein_coding protein_coding MGP_WSBEiJ_T0025792.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81625239 81640380 + MGP_WSBEiJ_P0025792 Tle2 protein_coding protein_coding MGP_WSBEiJ_T0025793.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81625325 81640375 + Tle2 protein_coding retained_intron MGP_WSBEiJ_T0025794.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81625407 81630544 + MGP_WSBEiJ_P0025794 Tle2 protein_coding protein_coding MGP_WSBEiJ_T0025795.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81625440 81640752 + MGP_WSBEiJ_P0025795 Tle2 protein_coding protein_coding MGP_WSBEiJ_T0025796.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81630742 81636834 + Tle2 protein_coding retained_intron MGP_WSBEiJ_T0025797.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81632451 81636791 + Tle2 protein_coding retained_intron MGP_WSBEiJ_T0025798.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81636998 81637853 + Tle2 protein_coding retained_intron MGP_WSBEiJ_T0025799.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81637332 81640330 + Tle2 protein_coding retained_intron MGP_WSBEiJ_T0025800.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81637875 81640380 + MGP_WSBEiJ_P0025800 Tle2 protein_coding protein_coding MGP_WSBEiJ_T0025801.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81637905 81640380 + MGP_WSBEiJ_P0025801 Tle2 protein_coding protein_coding MGP_WSBEiJ_T0025802.1 MGP_WSBEiJ_G0016956.1 mouse_genomes_project 10 81638547 81640208 + Tle2 protein_coding retained_intron MGP_WSBEiJ_T0098881.1 MGP_WSBEiJ_G0037544.1 mouse_genomes_project 10 122680061 122680121 + Gm24298 snoRNA snoRNA MGP_WSBEiJ_T0025766.1 MGP_WSBEiJ_G0016950.1 mouse_genomes_project 10 81493505 81522757 - MGP_WSBEiJ_P0025766 Celf5 protein_coding protein_coding MGP_WSBEiJ_T0025767.1 MGP_WSBEiJ_G0016950.1 mouse_genomes_project 10 81501286 81505106 - Celf5 protein_coding retained_intron MGP_WSBEiJ_T0025768.1 MGP_WSBEiJ_G0016950.1 mouse_genomes_project 10 81501778 81509677 - Celf5 protein_coding retained_intron MGP_WSBEiJ_T0025769.1 MGP_WSBEiJ_G0016950.1 mouse_genomes_project 10 81502030 81522824 - Celf5 protein_coding retained_intron MGP_WSBEiJ_T0024220.1 MGP_WSBEiJ_G0016532.1 mouse_genomes_project 10 31928397 31952614 - MGP_WSBEiJ_P0024220 Zufsp protein_coding protein_coding MGP_WSBEiJ_T0000787.1 MGP_WSBEiJ_G0000727.1 mouse_genomes_project 10 38539648 38542875 - TEC TEC MGP_WSBEiJ_T0026258.1 MGP_WSBEiJ_G0017078.1 mouse_genomes_project 10 100944333 101031327 + MGP_WSBEiJ_P0026258 Kitl protein_coding protein_coding MGP_WSBEiJ_T0026259.1 MGP_WSBEiJ_G0017078.1 mouse_genomes_project 10 100944529 101007072 + MGP_WSBEiJ_P0026259 Kitl protein_coding protein_coding MGP_WSBEiJ_T0026260.1 MGP_WSBEiJ_G0017078.1 mouse_genomes_project 10 100944619 101027270 + MGP_WSBEiJ_P0026260 Kitl protein_coding protein_coding MGP_WSBEiJ_T0026245.1 MGP_WSBEiJ_G0017070.1 mouse_genomes_project 10 98563061 98564941 - MGP_WSBEiJ_P0026245 protein_coding protein_coding MGP_WSBEiJ_T0023827.1 MGP_WSBEiJ_G0016404.1 mouse_genomes_project 10 4795128 4808159 - MGP_WSBEiJ_P0023827 Ginm1 protein_coding protein_coding MGP_WSBEiJ_T0023828.1 MGP_WSBEiJ_G0016404.1 mouse_genomes_project 10 4795131 4797754 - Ginm1 protein_coding retained_intron MGP_WSBEiJ_T0023829.1 MGP_WSBEiJ_G0016404.1 mouse_genomes_project 10 4795137 4808133 - MGP_WSBEiJ_P0023829 Ginm1 protein_coding protein_coding MGP_WSBEiJ_T0023830.1 MGP_WSBEiJ_G0016404.1 mouse_genomes_project 10 4806548 4820049 - Ginm1 protein_coding processed_transcript MGP_WSBEiJ_T0023831.1 MGP_WSBEiJ_G0016404.1 mouse_genomes_project 10 4818667 4820073 - Ginm1 protein_coding processed_transcript MGP_WSBEiJ_T0023832.1 MGP_WSBEiJ_G0016404.1 mouse_genomes_project 10 4819771 4820071 - MGP_WSBEiJ_P0023832 Ginm1 protein_coding protein_coding MGP_WSBEiJ_T0026356.1 MGP_WSBEiJ_G0017107.1 mouse_genomes_project 10 112732928 112735959 + MGP_WSBEiJ_P0026356 Bbs10 protein_coding protein_coding MGP_WSBEiJ_T0024768.1 MGP_WSBEiJ_G0016703.1 mouse_genomes_project 10 61852653 61881117 + MGP_WSBEiJ_P0024768 Slc25a16 protein_coding protein_coding MGP_WSBEiJ_T0024769.1 MGP_WSBEiJ_G0016703.1 mouse_genomes_project 10 61852687 61862305 + Slc25a16 protein_coding retained_intron MGP_WSBEiJ_T0024770.1 MGP_WSBEiJ_G0016703.1 mouse_genomes_project 10 61852700 61879037 + MGP_WSBEiJ_P0024770 Slc25a16 protein_coding protein_coding MGP_WSBEiJ_T0024771.1 MGP_WSBEiJ_G0016703.1 mouse_genomes_project 10 61877050 61879042 + Slc25a16 protein_coding retained_intron MGP_WSBEiJ_T0026171.1 MGP_WSBEiJ_G0017046.1 mouse_genomes_project 10 94441962 94459590 + MGP_WSBEiJ_P0026171 Usp44 protein_coding protein_coding MGP_WSBEiJ_T0025610.1 MGP_WSBEiJ_G0016906.1 mouse_genomes_project 10 80678582 80715081 - MGP_WSBEiJ_P0025610 Ap3d1 protein_coding protein_coding MGP_WSBEiJ_T0006003.1 MGP_WSBEiJ_G0005024.1 mouse_genomes_project 10 52883673 52888836 + Gm16998 lincRNA lincRNA MGP_WSBEiJ_T0026869.1 MGP_WSBEiJ_G0017295.1 mouse_genomes_project 10 132068207 132069176 + MGP_WSBEiJ_P0026869 protein_coding protein_coding MGP_WSBEiJ_T0024493.1 MGP_WSBEiJ_G0016629.1 mouse_genomes_project 10 52396266 52408520 + MGP_WSBEiJ_P0024493 Asf1a protein_coding protein_coding MGP_WSBEiJ_T0024226.1 MGP_WSBEiJ_G0016537.1 mouse_genomes_project 10 32106492 32111658 - MGP_WSBEiJ_P0024226 Fam26e protein_coding protein_coding MGP_WSBEiJ_T0024858.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68351697 68444930 + MGP_WSBEiJ_P0024858 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024859.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68407517 68487667 + MGP_WSBEiJ_P0024859 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024861.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68412710 68489591 + MGP_WSBEiJ_P0024861 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024862.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68412733 68471385 + Rhobtb1 protein_coding retained_intron MGP_WSBEiJ_T0024863.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68412752 68487766 + MGP_WSBEiJ_P0024863 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024864.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68413160 68461691 + MGP_WSBEiJ_P0024864 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024865.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68413247 68444940 + MGP_WSBEiJ_P0024865 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024866.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68413270 68489581 + MGP_WSBEiJ_P0024866 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024867.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68415379 68487477 + MGP_WSBEiJ_P0024867 Rhobtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024868.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68419456 68444945 + MGP_WSBEiJ_P0024868 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024869.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68461079 68466989 + Rhobtb1 protein_coding processed_transcript MGP_WSBEiJ_T0024870.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68477072 68487766 + MGP_WSBEiJ_P0024870 Rhobtb1 protein_coding protein_coding MGP_WSBEiJ_T0024871.1 MGP_WSBEiJ_G0016727.1 mouse_genomes_project 10 68477185 68484595 + Rhobtb1 protein_coding processed_transcript MGP_WSBEiJ_T0009439.1 MGP_WSBEiJ_G0007596.1 mouse_genomes_project 10 59897382 59897505 - Gm44308 miRNA miRNA MGP_WSBEiJ_T0012172.1 MGP_WSBEiJ_G0010302.1 mouse_genomes_project 10 58372974 58373223 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024559.1 MGP_WSBEiJ_G0016649.1 mouse_genomes_project 10 57781865 57848330 - MGP_WSBEiJ_P0024559 Sept10 protein_coding protein_coding MGP_WSBEiJ_T0023843.1 MGP_WSBEiJ_G0016408.1 mouse_genomes_project 10 5257981 5581009 - MGP_WSBEiJ_P0023843 Ust protein_coding protein_coding MGP_WSBEiJ_T0011087.1 MGP_WSBEiJ_G0009244.1 mouse_genomes_project 10 92673854 92673962 - Gm27366 misc_RNA misc_RNA MGP_WSBEiJ_T0024932.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69874065 69915707 - MGP_WSBEiJ_P0024932 Phyhipl protein_coding protein_coding MGP_WSBEiJ_T0024933.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69875057 69974452 - MGP_WSBEiJ_P0024933 Phyhipl protein_coding protein_coding MGP_WSBEiJ_T0024934.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69879220 69915682 - Phyhipl protein_coding retained_intron MGP_WSBEiJ_T0024935.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69883176 69915890 - Phyhipl protein_coding retained_intron MGP_WSBEiJ_T0024936.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69886273 69974459 - MGP_WSBEiJ_P0024936 Phyhipl protein_coding protein_coding MGP_WSBEiJ_T0024937.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69917648 69970419 - Phyhipl protein_coding processed_transcript MGP_WSBEiJ_T0024938.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69917732 69974457 - Phyhipl protein_coding processed_transcript MGP_WSBEiJ_T0024939.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69923858 69924333 - Phyhipl protein_coding processed_transcript MGP_WSBEiJ_T0024940.1 MGP_WSBEiJ_G0016734.1 mouse_genomes_project 10 69924368 69943399 - Phyhipl protein_coding processed_transcript MGP_WSBEiJ_T0006066.1 MGP_WSBEiJ_G0005065.1 mouse_genomes_project 10 118504175 118510844 - 1700030O20Rik lincRNA lincRNA MGP_WSBEiJ_T0098853.1 MGP_WSBEiJ_G0037516.1 mouse_genomes_project 10 47057141 47057270 + Gm23584 snoRNA snoRNA MGP_WSBEiJ_T0097624.1 MGP_WSBEiJ_G0036287.1 mouse_genomes_project 10 38035095 38035211 + Gm22105 snRNA snRNA MGP_WSBEiJ_T0009476.1 MGP_WSBEiJ_G0007633.1 mouse_genomes_project 10 105481758 105481866 + Mir6411 miRNA miRNA MGP_WSBEiJ_T0024396.1 MGP_WSBEiJ_G0016590.1 mouse_genomes_project 10 41222745 41297722 + MGP_WSBEiJ_P0024396 Sec63 protein_coding protein_coding MGP_WSBEiJ_T0024397.1 MGP_WSBEiJ_G0016590.1 mouse_genomes_project 10 41222864 41295600 + Sec63 protein_coding retained_intron MGP_WSBEiJ_T0024398.1 MGP_WSBEiJ_G0016590.1 mouse_genomes_project 10 41223055 41276852 + Sec63 protein_coding retained_intron MGP_WSBEiJ_T0024399.1 MGP_WSBEiJ_G0016590.1 mouse_genomes_project 10 41282037 41294488 + Sec63 protein_coding processed_transcript MGP_WSBEiJ_T0024400.1 MGP_WSBEiJ_G0016590.1 mouse_genomes_project 10 41282037 41294491 + Sec63 protein_coding processed_transcript MGP_WSBEiJ_T0025157.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76681233 76691318 + MGP_WSBEiJ_P0025157 Slc19a1 protein_coding protein_coding MGP_WSBEiJ_T0025158.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76681263 76690804 + MGP_WSBEiJ_P0025158 Slc19a1 protein_coding protein_coding MGP_WSBEiJ_T0025159.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76681683 76699387 + MGP_WSBEiJ_P0025159 Slc19a1 protein_coding protein_coding MGP_WSBEiJ_T0025160.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76682211 76699386 + MGP_WSBEiJ_P0025160 Slc19a1 protein_coding protein_coding MGP_WSBEiJ_T0025161.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76682267 76695225 + MGP_WSBEiJ_P0025161 Slc19a1 protein_coding protein_coding MGP_WSBEiJ_T0025162.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76682280 76691913 + MGP_WSBEiJ_P0025162 Slc19a1 protein_coding protein_coding MGP_WSBEiJ_T0025163.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76682318 76691287 + MGP_WSBEiJ_P0025163 Slc19a1 protein_coding protein_coding MGP_WSBEiJ_T0025164.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76691456 76693855 + Slc19a1 protein_coding retained_intron MGP_WSBEiJ_T0025165.1 MGP_WSBEiJ_G0016786.1 mouse_genomes_project 10 76691747 76709997 + MGP_WSBEiJ_P0025165 Slc19a1 protein_coding protein_coding MGP_WSBEiJ_T0024670.1 MGP_WSBEiJ_G0016678.1 mouse_genomes_project 10 60269571 60384686 + MGP_WSBEiJ_P0024670 Lrrc20 protein_coding protein_coding MGP_WSBEiJ_T0023971.1 MGP_WSBEiJ_G0016440.1 mouse_genomes_project 10 15404781 15483946 + MGP_WSBEiJ_P0023971 Reps1 protein_coding protein_coding MGP_WSBEiJ_T0023972.1 MGP_WSBEiJ_G0016440.1 mouse_genomes_project 10 15404826 15483960 + MGP_WSBEiJ_P0023972 Reps1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023973.1 MGP_WSBEiJ_G0016440.1 mouse_genomes_project 10 15404860 15483971 + MGP_WSBEiJ_P0023973 Reps1 protein_coding protein_coding MGP_WSBEiJ_T0023974.1 MGP_WSBEiJ_G0016440.1 mouse_genomes_project 10 15404883 15483764 + MGP_WSBEiJ_P0023974 Reps1 protein_coding protein_coding MGP_WSBEiJ_T0023975.1 MGP_WSBEiJ_G0016440.1 mouse_genomes_project 10 15446030 15463321 + Reps1 protein_coding retained_intron MGP_WSBEiJ_T0023976.1 MGP_WSBEiJ_G0016440.1 mouse_genomes_project 10 15447733 15462484 + MGP_WSBEiJ_P0023976 Reps1 protein_coding protein_coding MGP_WSBEiJ_T0023977.1 MGP_WSBEiJ_G0016440.1 mouse_genomes_project 10 15449093 15476026 + MGP_WSBEiJ_P0023977 Reps1 protein_coding protein_coding MGP_WSBEiJ_T0023978.1 MGP_WSBEiJ_G0016440.1 mouse_genomes_project 10 15481027 15481953 + Reps1 protein_coding retained_intron MGP_WSBEiJ_T0003038.1 MGP_WSBEiJ_G0002834.1 mouse_genomes_project 10 130996369 130999732 + Gm29585 antisense antisense MGP_WSBEiJ_T0003039.1 MGP_WSBEiJ_G0002834.1 mouse_genomes_project 10 130998670 130999753 + Gm29585 antisense antisense MGP_WSBEiJ_T0003040.1 MGP_WSBEiJ_G0002834.1 mouse_genomes_project 10 130999424 131022326 + Gm29585 antisense antisense MGP_WSBEiJ_T0009455.1 MGP_WSBEiJ_G0007612.1 mouse_genomes_project 10 80569213 80569283 + Mir6912 miRNA miRNA MGP_WSBEiJ_T0024081.1 MGP_WSBEiJ_G0016473.1 mouse_genomes_project 10 20300896 20330412 - MGP_WSBEiJ_P0024081 Tbpl1 protein_coding protein_coding MGP_WSBEiJ_T0024082.1 MGP_WSBEiJ_G0016473.1 mouse_genomes_project 10 20302396 20330903 - MGP_WSBEiJ_P0024082 Tbpl1 protein_coding protein_coding MGP_WSBEiJ_T0024083.1 MGP_WSBEiJ_G0016473.1 mouse_genomes_project 10 20302538 20303401 - Tbpl1 protein_coding processed_transcript MGP_WSBEiJ_T0024084.1 MGP_WSBEiJ_G0016473.1 mouse_genomes_project 10 20308796 20330326 - Tbpl1 protein_coding retained_intron MGP_WSBEiJ_T0026052.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89349224 89687107 - MGP_WSBEiJ_P0026052 Ano4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026053.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89349225 89686907 - MGP_WSBEiJ_P0026053 Ano4 protein_coding protein_coding MGP_WSBEiJ_T0026054.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89349231 89686939 - MGP_WSBEiJ_P0026054 Ano4 protein_coding protein_coding MGP_WSBEiJ_T0026055.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89349232 89686617 - MGP_WSBEiJ_P0026055 Ano4 protein_coding protein_coding MGP_WSBEiJ_T0026056.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89380837 89395890 - MGP_WSBEiJ_P0026056 Ano4 protein_coding protein_coding MGP_WSBEiJ_T0026057.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89390617 89438337 - Ano4 protein_coding processed_transcript MGP_WSBEiJ_T0026058.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89428882 89686871 - Ano4 protein_coding retained_intron MGP_WSBEiJ_T0026059.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89448378 89781937 - MGP_WSBEiJ_P0026059 Ano4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026060.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89475464 89686907 - MGP_WSBEiJ_P0026060 Ano4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026061.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89476016 89686453 - MGP_WSBEiJ_P0026061 Ano4 protein_coding protein_coding MGP_WSBEiJ_T0026062.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89498065 89752603 - MGP_WSBEiJ_P0026062 Ano4 protein_coding protein_coding MGP_WSBEiJ_T0026063.1 MGP_WSBEiJ_G0017023.1 mouse_genomes_project 10 89770758 89782054 - Ano4 protein_coding processed_transcript MGP_WSBEiJ_T0023867.1 MGP_WSBEiJ_G0016416.1 mouse_genomes_project 10 7798910 8219059 - MGP_WSBEiJ_P0023867 Grm1 protein_coding protein_coding MGP_WSBEiJ_T0023868.1 MGP_WSBEiJ_G0016416.1 mouse_genomes_project 10 7801439 8219008 - MGP_WSBEiJ_P0023868 Grm1 protein_coding protein_coding MGP_WSBEiJ_T0023869.1 MGP_WSBEiJ_G0016416.1 mouse_genomes_project 10 7801639 8217683 - MGP_WSBEiJ_P0023869 Grm1 protein_coding protein_coding MGP_WSBEiJ_T0023870.1 MGP_WSBEiJ_G0016416.1 mouse_genomes_project 10 7802284 7834847 - Grm1 protein_coding processed_transcript MGP_WSBEiJ_T0023871.1 MGP_WSBEiJ_G0016416.1 mouse_genomes_project 10 7862191 7864824 - Grm1 protein_coding processed_transcript MGP_WSBEiJ_T0023872.1 MGP_WSBEiJ_G0016416.1 mouse_genomes_project 10 8217215 8218953 - Grm1 protein_coding processed_transcript MGP_WSBEiJ_T0024754.1 MGP_WSBEiJ_G0016699.1 mouse_genomes_project 10 61504157 61543090 - MGP_WSBEiJ_P0024754 Ddx50 protein_coding protein_coding MGP_WSBEiJ_T0024755.1 MGP_WSBEiJ_G0016699.1 mouse_genomes_project 10 61504372 61543362 - MGP_WSBEiJ_P0024755 Ddx50 protein_coding unknown_likely_coding MGP_WSBEiJ_T0006061.1 MGP_WSBEiJ_G0005061.1 mouse_genomes_project 10 112950249 112951337 - Gm28592 lincRNA lincRNA MGP_WSBEiJ_T0024442.1 MGP_WSBEiJ_G0016607.1 mouse_genomes_project 10 43953054 44048652 - MGP_WSBEiJ_P0024442 Lin28b protein_coding protein_coding MGP_WSBEiJ_T0024443.1 MGP_WSBEiJ_G0016607.1 mouse_genomes_project 10 43957503 44048739 - MGP_WSBEiJ_P0024443 Lin28b protein_coding unknown_likely_coding MGP_WSBEiJ_T0025345.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604343 79614871 - Polrmt protein_coding retained_intron MGP_WSBEiJ_T0025346.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604347 79607639 - MGP_WSBEiJ_P0025346 Polrmt protein_coding protein_coding MGP_WSBEiJ_T0025347.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604348 79614871 - Polrmt protein_coding retained_intron MGP_WSBEiJ_T0025348.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604349 79605048 - Polrmt protein_coding processed_transcript MGP_WSBEiJ_T0025349.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604350 79614879 - MGP_WSBEiJ_P0025349 Polrmt protein_coding protein_coding MGP_WSBEiJ_T0025350.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604350 79614877 - MGP_WSBEiJ_P0025350 Polrmt protein_coding protein_coding MGP_WSBEiJ_T0025351.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604392 79605033 - Polrmt protein_coding retained_intron MGP_WSBEiJ_T0025352.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604393 79605978 - Polrmt protein_coding retained_intron MGP_WSBEiJ_T0025353.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604394 79614869 - MGP_WSBEiJ_P0025353 Polrmt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025354.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604427 79605951 - Polrmt protein_coding retained_intron MGP_WSBEiJ_T0025355.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79604797 79606896 - Polrmt protein_coding retained_intron MGP_WSBEiJ_T0025356.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79606352 79607640 - Polrmt protein_coding retained_intron MGP_WSBEiJ_T0025357.1 MGP_WSBEiJ_G0016846.1 mouse_genomes_project 10 79612019 79614871 - Polrmt protein_coding processed_transcript MGP_WSBEiJ_T0097668.1 MGP_WSBEiJ_G0036331.1 mouse_genomes_project 10 129774890 129774999 - Gm23819 snRNA snRNA MGP_WSBEiJ_T0026169.1 MGP_WSBEiJ_G0017045.1 mouse_genomes_project 10 94245896 94249966 + MGP_WSBEiJ_P0026169 Ntn4 protein_coding protein_coding MGP_WSBEiJ_T0026170.1 MGP_WSBEiJ_G0017045.1 mouse_genomes_project 10 94246264 94361807 + MGP_WSBEiJ_P0026170 Ntn4 protein_coding protein_coding MGP_WSBEiJ_T0002988.1 MGP_WSBEiJ_G0002799.1 mouse_genomes_project 10 81013952 81015413 + Gm16099 antisense antisense MGP_WSBEiJ_T0002989.1 MGP_WSBEiJ_G0002799.1 mouse_genomes_project 10 81014224 81015707 + Gm16099 antisense antisense MGP_WSBEiJ_T0024778.1 MGP_WSBEiJ_G0016705.1 mouse_genomes_project 10 61920801 61930940 + Rufy2 protein_coding retained_intron MGP_WSBEiJ_T0024779.1 MGP_WSBEiJ_G0016705.1 mouse_genomes_project 10 61920817 61947645 + MGP_WSBEiJ_P0024779 Rufy2 protein_coding protein_coding MGP_WSBEiJ_T0024780.1 MGP_WSBEiJ_G0016705.1 mouse_genomes_project 10 61920820 61958076 + MGP_WSBEiJ_P0024780 Rufy2 protein_coding protein_coding MGP_WSBEiJ_T0024781.1 MGP_WSBEiJ_G0016705.1 mouse_genomes_project 10 61920830 61961356 + MGP_WSBEiJ_P0024781 Rufy2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024782.1 MGP_WSBEiJ_G0016705.1 mouse_genomes_project 10 61920840 61947618 + MGP_WSBEiJ_P0024782 Rufy2 protein_coding protein_coding MGP_WSBEiJ_T0024783.1 MGP_WSBEiJ_G0016705.1 mouse_genomes_project 10 61920871 61945398 + MGP_WSBEiJ_P0024783 Rufy2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024784.1 MGP_WSBEiJ_G0016705.1 mouse_genomes_project 10 61921997 61929793 + MGP_WSBEiJ_P0024784 Rufy2 protein_coding protein_coding MGP_WSBEiJ_T0024785.1 MGP_WSBEiJ_G0016705.1 mouse_genomes_project 10 61945435 61951231 + Rufy2 protein_coding retained_intron MGP_WSBEiJ_T0026695.1 MGP_WSBEiJ_G0017220.1 mouse_genomes_project 10 130211410 130231659 + MGP_WSBEiJ_P0026695 protein_coding protein_coding MGP_WSBEiJ_T0026696.1 MGP_WSBEiJ_G0017220.1 mouse_genomes_project 10 130211410 130230986 + MGP_WSBEiJ_P0026696 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006028.1 MGP_WSBEiJ_G0005043.1 mouse_genomes_project 10 82962355 82975110 + 1700028I16Rik lincRNA lincRNA MGP_WSBEiJ_T0012149.1 MGP_WSBEiJ_G0010279.1 mouse_genomes_project 10 17965076 17967294 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026790.1 MGP_WSBEiJ_G0017253.1 mouse_genomes_project 10 131024898 131026287 - MGP_WSBEiJ_P0026790 protein_coding protein_coding MGP_WSBEiJ_T0026791.1 MGP_WSBEiJ_G0017253.1 mouse_genomes_project 10 131024898 131026135 - MGP_WSBEiJ_P0026791 protein_coding protein_coding MGP_WSBEiJ_T0026792.1 MGP_WSBEiJ_G0017253.1 mouse_genomes_project 10 131024898 131026144 - MGP_WSBEiJ_P0026792 protein_coding protein_coding MGP_WSBEiJ_T0026793.1 MGP_WSBEiJ_G0017253.1 mouse_genomes_project 10 131024901 131026120 - protein_coding retained_intron MGP_WSBEiJ_T0026794.1 MGP_WSBEiJ_G0017253.1 mouse_genomes_project 10 131024904 131026084 - MGP_WSBEiJ_P0026794 protein_coding protein_coding MGP_WSBEiJ_T0026795.1 MGP_WSBEiJ_G0017253.1 mouse_genomes_project 10 131024905 131026141 - protein_coding retained_intron MGP_WSBEiJ_T0026796.1 MGP_WSBEiJ_G0017253.1 mouse_genomes_project 10 131025457 131026094 - protein_coding retained_intron MGP_WSBEiJ_T0026890.1 MGP_WSBEiJ_G0017309.1 mouse_genomes_project 10 132541899 132542856 - MGP_WSBEiJ_P0026890 Olfr818 protein_coding protein_coding MGP_WSBEiJ_T0026891.1 MGP_WSBEiJ_G0017309.1 mouse_genomes_project 10 132542141 132545837 - MGP_WSBEiJ_P0026891 Olfr818 protein_coding protein_coding MGP_WSBEiJ_T0098857.1 MGP_WSBEiJ_G0037520.1 mouse_genomes_project 10 58483278 58483410 - Gm23803 snoRNA snoRNA MGP_WSBEiJ_T0026292.1 MGP_WSBEiJ_G0017085.1 mouse_genomes_project 10 103586683 103624739 + MGP_WSBEiJ_P0026292 Rassf9 protein_coding protein_coding MGP_WSBEiJ_T0024359.1 MGP_WSBEiJ_G0016582.1 mouse_genomes_project 10 40149633 40237642 - MGP_WSBEiJ_P0024359 Cep57l1 protein_coding protein_coding MGP_WSBEiJ_T0024360.1 MGP_WSBEiJ_G0016582.1 mouse_genomes_project 10 40149635 40237676 - MGP_WSBEiJ_P0024360 Cep57l1 protein_coding protein_coding MGP_WSBEiJ_T0024361.1 MGP_WSBEiJ_G0016582.1 mouse_genomes_project 10 40150639 40237651 - MGP_WSBEiJ_P0024361 Cep57l1 protein_coding protein_coding MGP_WSBEiJ_T0024362.1 MGP_WSBEiJ_G0016582.1 mouse_genomes_project 10 40151942 40153681 - MGP_WSBEiJ_P0024362 Cep57l1 protein_coding protein_coding MGP_WSBEiJ_T0024363.1 MGP_WSBEiJ_G0016582.1 mouse_genomes_project 10 40156312 40159730 - Cep57l1 protein_coding retained_intron MGP_WSBEiJ_T0024364.1 MGP_WSBEiJ_G0016582.1 mouse_genomes_project 10 40159273 40177371 - Cep57l1 protein_coding retained_intron MGP_WSBEiJ_T0024365.1 MGP_WSBEiJ_G0016582.1 mouse_genomes_project 10 40173428 40237641 - Cep57l1 protein_coding retained_intron MGP_WSBEiJ_T0024366.1 MGP_WSBEiJ_G0016582.1 mouse_genomes_project 10 40175468 40237659 - Cep57l1 protein_coding retained_intron MGP_WSBEiJ_T0026222.1 MGP_WSBEiJ_G0017056.1 mouse_genomes_project 10 95848158 96012594 - MGP_WSBEiJ_P0026222 Cradd protein_coding protein_coding MGP_WSBEiJ_T0025113.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75869553 75875606 - MGP_WSBEiJ_P0025113 Dip2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025114.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75872833 75964166 - MGP_WSBEiJ_P0025114 Dip2a protein_coding protein_coding MGP_WSBEiJ_T0025115.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75873131 75896043 - Dip2a protein_coding retained_intron MGP_WSBEiJ_T0025116.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75873148 75964135 - MGP_WSBEiJ_P0025116 Dip2a protein_coding protein_coding MGP_WSBEiJ_T0025117.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75873148 75964166 - MGP_WSBEiJ_P0025117 Dip2a protein_coding protein_coding MGP_WSBEiJ_T0025118.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75874718 75964072 - MGP_WSBEiJ_P0025118 Dip2a protein_coding unknown_likely_coding MGP_WSBEiJ_T0025119.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75874769 75880669 - Dip2a protein_coding retained_intron MGP_WSBEiJ_T0025120.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75892792 75902625 - MGP_WSBEiJ_P0025120 Dip2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025121.1 MGP_WSBEiJ_G0016774.1 mouse_genomes_project 10 75905790 75964107 - Dip2a protein_coding retained_intron MGP_WSBEiJ_T0026300.1 MGP_WSBEiJ_G0017088.1 mouse_genomes_project 10 104541570 104600908 + MGP_WSBEiJ_P0026300 Slc6a15 protein_coding protein_coding MGP_WSBEiJ_T0026301.1 MGP_WSBEiJ_G0017088.1 mouse_genomes_project 10 104541570 104600908 + MGP_WSBEiJ_P0026301 Slc6a15 protein_coding protein_coding MGP_WSBEiJ_T0006031.1 MGP_WSBEiJ_G0005045.1 mouse_genomes_project 10 84725931 84731836 - Platr7 lincRNA lincRNA MGP_WSBEiJ_T0012177.1 MGP_WSBEiJ_G0010307.1 mouse_genomes_project 10 71369841 71370646 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025287.1 MGP_WSBEiJ_G0016819.1 mouse_genomes_project 10 78373646 78381020 - MGP_WSBEiJ_P0025287 Syde1 protein_coding protein_coding MGP_WSBEiJ_T0012151.1 MGP_WSBEiJ_G0010281.1 mouse_genomes_project 10 18762496 18763506 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025647.1 MGP_WSBEiJ_G0016922.1 mouse_genomes_project 10 81017677 81026365 - MGP_WSBEiJ_P0025647 Slc39a3 protein_coding protein_coding MGP_WSBEiJ_T0025648.1 MGP_WSBEiJ_G0016922.1 mouse_genomes_project 10 81017679 81026247 - MGP_WSBEiJ_P0025648 Slc39a3 protein_coding protein_coding MGP_WSBEiJ_T0025649.1 MGP_WSBEiJ_G0016922.1 mouse_genomes_project 10 81017680 81023032 - MGP_WSBEiJ_P0025649 Slc39a3 protein_coding protein_coding MGP_WSBEiJ_T0025650.1 MGP_WSBEiJ_G0016922.1 mouse_genomes_project 10 81022976 81026221 - Slc39a3 protein_coding processed_transcript MGP_WSBEiJ_T0025651.1 MGP_WSBEiJ_G0016922.1 mouse_genomes_project 10 81023002 81026189 - Slc39a3 protein_coding processed_transcript MGP_WSBEiJ_T0005977.1 MGP_WSBEiJ_G0005003.1 mouse_genomes_project 10 1383700 1388567 + Gm21781 lincRNA lincRNA MGP_WSBEiJ_T0012190.1 MGP_WSBEiJ_G0010320.1 mouse_genomes_project 10 97177614 97177803 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024097.1 MGP_WSBEiJ_G0016480.1 mouse_genomes_project 10 21525755 21526869 + MGP_WSBEiJ_P0024097 Taar1 protein_coding protein_coding MGP_WSBEiJ_T0025993.1 MGP_WSBEiJ_G0017009.1 mouse_genomes_project 10 88166200 88238742 + MGP_WSBEiJ_P0025993 Igf1 protein_coding protein_coding MGP_WSBEiJ_T0025994.1 MGP_WSBEiJ_G0017009.1 mouse_genomes_project 10 88167000 88244890 + MGP_WSBEiJ_P0025994 Igf1 protein_coding protein_coding MGP_WSBEiJ_T0025995.1 MGP_WSBEiJ_G0017009.1 mouse_genomes_project 10 88167190 88239648 + MGP_WSBEiJ_P0025995 Igf1 protein_coding protein_coding MGP_WSBEiJ_T0025996.1 MGP_WSBEiJ_G0017009.1 mouse_genomes_project 10 88167423 88238740 + MGP_WSBEiJ_P0025996 Igf1 protein_coding protein_coding MGP_WSBEiJ_T0025997.1 MGP_WSBEiJ_G0017009.1 mouse_genomes_project 10 88167544 88223215 + MGP_WSBEiJ_P0025997 Igf1 protein_coding protein_coding MGP_WSBEiJ_T0025998.1 MGP_WSBEiJ_G0017009.1 mouse_genomes_project 10 88167963 88223760 + MGP_WSBEiJ_P0025998 Igf1 protein_coding protein_coding MGP_WSBEiJ_T0025999.1 MGP_WSBEiJ_G0017009.1 mouse_genomes_project 10 88168539 88238746 + MGP_WSBEiJ_P0025999 Igf1 protein_coding protein_coding MGP_WSBEiJ_T0026000.1 MGP_WSBEiJ_G0017009.1 mouse_genomes_project 10 88169262 88238724 + MGP_WSBEiJ_P0026000 Igf1 protein_coding protein_coding MGP_WSBEiJ_T0012147.1 MGP_WSBEiJ_G0010277.1 mouse_genomes_project 10 11096444 11097452 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024166.1 MGP_WSBEiJ_G0016509.1 mouse_genomes_project 10 26449664 26674809 + MGP_WSBEiJ_P0024166 Themis protein_coding protein_coding MGP_WSBEiJ_T0024167.1 MGP_WSBEiJ_G0016509.1 mouse_genomes_project 10 26449664 26574079 + MGP_WSBEiJ_P0024167 Themis protein_coding protein_coding MGP_WSBEiJ_T0024168.1 MGP_WSBEiJ_G0016509.1 mouse_genomes_project 10 26449699 26548669 + Themis protein_coding retained_intron MGP_WSBEiJ_T0024169.1 MGP_WSBEiJ_G0016509.1 mouse_genomes_project 10 26449701 26581935 + MGP_WSBEiJ_P0024169 Themis protein_coding protein_coding MGP_WSBEiJ_T0024170.1 MGP_WSBEiJ_G0016509.1 mouse_genomes_project 10 26449931 26674812 + MGP_WSBEiJ_P0024170 Themis protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024171.1 MGP_WSBEiJ_G0016509.1 mouse_genomes_project 10 26449937 26518117 + MGP_WSBEiJ_P0024171 Themis protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024172.1 MGP_WSBEiJ_G0016509.1 mouse_genomes_project 10 26449937 26562461 + MGP_WSBEiJ_P0024172 Themis protein_coding protein_coding MGP_WSBEiJ_T0024424.1 MGP_WSBEiJ_G0016597.1 mouse_genomes_project 10 42089306 42094386 + MGP_WSBEiJ_P0024424 Cd24a protein_coding protein_coding MGP_WSBEiJ_T0023930.1 MGP_WSBEiJ_G0016428.1 mouse_genomes_project 10 10699402 10731229 - MGP_WSBEiJ_P0023930 Pex3 protein_coding protein_coding MGP_WSBEiJ_T0023931.1 MGP_WSBEiJ_G0016428.1 mouse_genomes_project 10 10700445 10730985 - MGP_WSBEiJ_P0023931 Pex3 protein_coding protein_coding MGP_WSBEiJ_T0023932.1 MGP_WSBEiJ_G0016428.1 mouse_genomes_project 10 10704535 10712043 - Pex3 protein_coding retained_intron MGP_WSBEiJ_T0023933.1 MGP_WSBEiJ_G0016428.1 mouse_genomes_project 10 10707346 10730951 - Pex3 protein_coding processed_transcript MGP_WSBEiJ_T0023934.1 MGP_WSBEiJ_G0016428.1 mouse_genomes_project 10 10711808 10730906 - Pex3 protein_coding processed_transcript MGP_WSBEiJ_T0002985.1 MGP_WSBEiJ_G0002796.1 mouse_genomes_project 10 80299905 80300440 + Gm15123 antisense antisense MGP_WSBEiJ_T0026172.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94470171 94502365 - MGP_WSBEiJ_P0026172 Metap2 protein_coding protein_coding MGP_WSBEiJ_T0026173.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94471509 94476218 - Metap2 protein_coding retained_intron MGP_WSBEiJ_T0026174.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94472605 94503757 - MGP_WSBEiJ_P0026174 Metap2 protein_coding protein_coding MGP_WSBEiJ_T0026175.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94472606 94502335 - MGP_WSBEiJ_P0026175 Metap2 protein_coding protein_coding MGP_WSBEiJ_T0026176.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94472606 94502326 - MGP_WSBEiJ_P0026176 Metap2 protein_coding protein_coding MGP_WSBEiJ_T0026177.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94473258 94483796 - MGP_WSBEiJ_P0026177 Metap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026178.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94474388 94476153 - Metap2 protein_coding retained_intron MGP_WSBEiJ_T0026179.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94480986 94483654 - Metap2 protein_coding retained_intron MGP_WSBEiJ_T0026180.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94481083 94502165 - MGP_WSBEiJ_P0026180 Metap2 protein_coding protein_coding MGP_WSBEiJ_T0026181.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94482333 94502365 - MGP_WSBEiJ_P0026181 Metap2 protein_coding protein_coding MGP_WSBEiJ_T0026182.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94491604 94502279 - Metap2 protein_coding retained_intron MGP_WSBEiJ_T0026183.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94491683 94502312 - Metap2 protein_coding retained_intron MGP_WSBEiJ_T0026184.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94502239 94502849 - Metap2 protein_coding processed_transcript MGP_WSBEiJ_T0026185.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94502478 94503684 - Metap2 protein_coding processed_transcript MGP_WSBEiJ_T0026186.1 MGP_WSBEiJ_G0017047.1 mouse_genomes_project 10 94502595 94509652 - Metap2 protein_coding processed_transcript MGP_WSBEiJ_T0002964.1 MGP_WSBEiJ_G0002779.1 mouse_genomes_project 10 59685057 59693786 + Gm26947 antisense antisense MGP_WSBEiJ_T0026663.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129915182 130002844 - MGP_WSBEiJ_P0026663 Lrp1 protein_coding protein_coding MGP_WSBEiJ_T0026664.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129915614 129916612 - Lrp1 protein_coding retained_intron MGP_WSBEiJ_T0026665.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129916250 129917155 - Lrp1 protein_coding retained_intron MGP_WSBEiJ_T0026666.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129920457 129921470 - Lrp1 protein_coding retained_intron MGP_WSBEiJ_T0026667.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129924653 129928179 - MGP_WSBEiJ_P0026667 Lrp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026668.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129958249 129961830 - Lrp1 protein_coding retained_intron MGP_WSBEiJ_T0026669.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129961673 129963405 - MGP_WSBEiJ_P0026669 Lrp1 protein_coding protein_coding MGP_WSBEiJ_T0026670.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129967522 130002844 - Lrp1 protein_coding retained_intron MGP_WSBEiJ_T0026671.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129969068 130002666 - MGP_WSBEiJ_P0026671 Lrp1 protein_coding protein_coding MGP_WSBEiJ_T0026672.1 MGP_WSBEiJ_G0017211.1 mouse_genomes_project 10 129979783 130002618 - MGP_WSBEiJ_P0026672 Lrp1 protein_coding protein_coding MGP_WSBEiJ_T0026726.1 MGP_WSBEiJ_G0017231.1 mouse_genomes_project 10 130567532 130620272 - MGP_WSBEiJ_P0026726 Rbms2 protein_coding protein_coding MGP_WSBEiJ_T0024832.1 MGP_WSBEiJ_G0016718.1 mouse_genomes_project 10 66369940 66388843 - MGP_WSBEiJ_P0024832 Nrbf2 protein_coding protein_coding MGP_WSBEiJ_T0024833.1 MGP_WSBEiJ_G0016718.1 mouse_genomes_project 10 66371091 66388718 - MGP_WSBEiJ_P0024833 Nrbf2 protein_coding protein_coding MGP_WSBEiJ_T0097636.1 MGP_WSBEiJ_G0036299.1 mouse_genomes_project 10 56057357 56057457 + Gm24285 snRNA snRNA MGP_WSBEiJ_T0098836.1 MGP_WSBEiJ_G0037499.1 mouse_genomes_project 10 19364255 19364364 - Gm23839 snoRNA snoRNA MGP_WSBEiJ_T0026026.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88790489 88821757 - MGP_WSBEiJ_P0026026 Chpt1 protein_coding protein_coding MGP_WSBEiJ_T0026027.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88790748 88826184 - MGP_WSBEiJ_P0026027 Chpt1 protein_coding protein_coding MGP_WSBEiJ_T0026031.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88814149 88851323 - MGP_WSBEiJ_P0026031 Chpt1 protein_coding protein_coding MGP_WSBEiJ_T0026032.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88817739 88851249 - MGP_WSBEiJ_P0026032 Chpt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026033.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88818137 88851220 - MGP_WSBEiJ_P0026033 Chpt1 protein_coding protein_coding MGP_WSBEiJ_T0026034.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88818137 88851003 - MGP_WSBEiJ_P0026034 Chpt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026035.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88818159 88851139 - MGP_WSBEiJ_P0026035 Chpt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026036.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88830674 88851168 - MGP_WSBEiJ_P0026036 Chpt1 protein_coding protein_coding MGP_WSBEiJ_T0026037.1 MGP_WSBEiJ_G0017016.1 mouse_genomes_project 10 88832123 88851175 - MGP_WSBEiJ_P0026037 Chpt1 protein_coding protein_coding MGP_WSBEiJ_T0025686.1 MGP_WSBEiJ_G0016933.1 mouse_genomes_project 10 81209100 81239072 - MGP_WSBEiJ_P0025686 Atcay protein_coding protein_coding MGP_WSBEiJ_T0025687.1 MGP_WSBEiJ_G0016933.1 mouse_genomes_project 10 81209100 81239024 - MGP_WSBEiJ_P0025687 Atcay protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025688.1 MGP_WSBEiJ_G0016933.1 mouse_genomes_project 10 81215468 81220365 - Atcay protein_coding retained_intron MGP_WSBEiJ_T0024461.1 MGP_WSBEiJ_G0016612.1 mouse_genomes_project 10 50192018 50200816 + MGP_WSBEiJ_P0024461 Lilr4b protein_coding protein_coding MGP_WSBEiJ_T0024463.1 MGP_WSBEiJ_G0016612.1 mouse_genomes_project 10 50192303 50199848 + Lilr4b protein_coding processed_transcript MGP_WSBEiJ_T0016499.1 MGP_WSBEiJ_G0014546.1 mouse_genomes_project 10 1402466 1416425 + Gm16153 processed_transcript processed_transcript MGP_WSBEiJ_T0098879.1 MGP_WSBEiJ_G0037542.1 mouse_genomes_project 10 118085159 118085296 + Gm26495 snoRNA snoRNA MGP_WSBEiJ_T0024966.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 72565454 73816482 + Pcdh15 protein_coding retained_intron MGP_WSBEiJ_T0024967.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 72565547 73187515 + Pcdh15 protein_coding retained_intron MGP_WSBEiJ_T0024968.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 72565565 72958235 + Pcdh15 protein_coding retained_intron MGP_WSBEiJ_T0024969.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289866 74154971 + MGP_WSBEiJ_P0024969 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024970.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289866 74141855 + MGP_WSBEiJ_P0024970 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024971.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74140684 + MGP_WSBEiJ_P0024971 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024972.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74155321 + MGP_WSBEiJ_P0024972 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024973.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024973 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024974.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74155321 + MGP_WSBEiJ_P0024974 Pcdh15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024975.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024975 Pcdh15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024976.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024976 Pcdh15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024977.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024977 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024978.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74155321 + MGP_WSBEiJ_P0024978 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024979.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024979 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024980.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74155321 + MGP_WSBEiJ_P0024980 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024981.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024981 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024982.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74157072 + MGP_WSBEiJ_P0024982 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024983.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024983 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024984.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74155321 + MGP_WSBEiJ_P0024984 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024985.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74160332 + MGP_WSBEiJ_P0024985 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024986.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74156908 + MGP_WSBEiJ_P0024986 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024987.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74155321 + MGP_WSBEiJ_P0024987 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024988.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74155321 + MGP_WSBEiJ_P0024988 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024989.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024989 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024990.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139621 + MGP_WSBEiJ_P0024990 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024991.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74156908 + MGP_WSBEiJ_P0024991 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024992.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74155321 + MGP_WSBEiJ_P0024992 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024993.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289882 74139749 + MGP_WSBEiJ_P0024993 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024994.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289942 74007254 + MGP_WSBEiJ_P0024994 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024995.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289942 74007254 + MGP_WSBEiJ_P0024995 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024996.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73289942 74007254 + MGP_WSBEiJ_P0024996 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024997.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73419870 74154812 + MGP_WSBEiJ_P0024997 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024998.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73419870 74156762 + MGP_WSBEiJ_P0024998 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0024999.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73419870 74156666 + MGP_WSBEiJ_P0024999 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0025000.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73801475 73830125 + Pcdh15 protein_coding processed_transcript MGP_WSBEiJ_T0025001.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73855435 74139752 + MGP_WSBEiJ_P0025001 Pcdh15 protein_coding protein_coding MGP_WSBEiJ_T0025002.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 73886405 73897248 + Pcdh15 protein_coding retained_intron MGP_WSBEiJ_T0025003.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 74084771 74131706 + Pcdh15 protein_coding retained_intron MGP_WSBEiJ_T0025004.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 74137996 74156808 + Pcdh15 protein_coding processed_transcript MGP_WSBEiJ_T0025005.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 74138493 74145243 + Pcdh15 protein_coding retained_intron MGP_WSBEiJ_T0025006.1 MGP_WSBEiJ_G0016742.1 mouse_genomes_project 10 74138918 74151324 + Pcdh15 protein_coding processed_transcript MGP_WSBEiJ_T0025638.1 MGP_WSBEiJ_G0016919.1 mouse_genomes_project 10 80914282 80916401 + MGP_WSBEiJ_P0025638 Gadd45b protein_coding protein_coding MGP_WSBEiJ_T0026168.1 MGP_WSBEiJ_G0017044.1 mouse_genomes_project 10 94195825 94211096 + MGP_WSBEiJ_P0026168 4933408J17Rik protein_coding protein_coding MGP_WSBEiJ_T0026812.1 MGP_WSBEiJ_G0017260.1 mouse_genomes_project 10 131191183 131198939 - MGP_WSBEiJ_P0026812 Cdk2 protein_coding protein_coding MGP_WSBEiJ_T0026813.1 MGP_WSBEiJ_G0017260.1 mouse_genomes_project 10 131191183 131198939 - MGP_WSBEiJ_P0026813 Cdk2 protein_coding protein_coding MGP_WSBEiJ_T0006007.1 MGP_WSBEiJ_G0005028.1 mouse_genomes_project 10 59805943 59816127 - lincRNA lincRNA MGP_WSBEiJ_T0024050.1 MGP_WSBEiJ_G0016463.1 mouse_genomes_project 10 18594988 18637502 - MGP_WSBEiJ_P0024050 Myb protein_coding protein_coding MGP_WSBEiJ_T0024051.1 MGP_WSBEiJ_G0016463.1 mouse_genomes_project 10 18595328 18637502 - MGP_WSBEiJ_P0024051 Myb protein_coding protein_coding MGP_WSBEiJ_T0024052.1 MGP_WSBEiJ_G0016463.1 mouse_genomes_project 10 18613884 18637456 - Myb protein_coding retained_intron MGP_WSBEiJ_T0011095.1 MGP_WSBEiJ_G0009252.1 mouse_genomes_project 10 131756893 131757198 - Gm25807 misc_RNA misc_RNA MGP_WSBEiJ_T0025222.1 MGP_WSBEiJ_G0016803.1 mouse_genomes_project 10 77628616 77633587 - MGP_WSBEiJ_P0025222 Lrrc3 protein_coding protein_coding MGP_WSBEiJ_T0024843.1 MGP_WSBEiJ_G0016722.1 mouse_genomes_project 10 67026314 67053731 - MGP_WSBEiJ_P0024843 Zfp365 protein_coding protein_coding MGP_WSBEiJ_T0024844.1 MGP_WSBEiJ_G0016722.1 mouse_genomes_project 10 67026379 67042363 - Zfp365 protein_coding processed_transcript MGP_WSBEiJ_T0024845.1 MGP_WSBEiJ_G0016722.1 mouse_genomes_project 10 67031039 67040053 - Zfp365 protein_coding processed_transcript MGP_WSBEiJ_T0024846.1 MGP_WSBEiJ_G0016722.1 mouse_genomes_project 10 67037750 67053504 - Zfp365 protein_coding retained_intron MGP_WSBEiJ_T0026761.1 MGP_WSBEiJ_G0017243.1 mouse_genomes_project 10 130826176 130833057 - MGP_WSBEiJ_P0026761 Coq10a protein_coding protein_coding MGP_WSBEiJ_T0026762.1 MGP_WSBEiJ_G0017243.1 mouse_genomes_project 10 130826703 130831727 - MGP_WSBEiJ_P0026762 Coq10a protein_coding unknown_likely_coding MGP_WSBEiJ_T0012155.1 MGP_WSBEiJ_G0010285.1 mouse_genomes_project 10 22230873 22232577 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026867.1 MGP_WSBEiJ_G0017293.1 mouse_genomes_project 10 132052374 132053313 + MGP_WSBEiJ_P0026867 Olfr789 protein_coding protein_coding MGP_WSBEiJ_T0002975.1 MGP_WSBEiJ_G0002787.1 mouse_genomes_project 10 70399871 70400647 + Gm15647 antisense antisense MGP_WSBEiJ_T0098873.1 MGP_WSBEiJ_G0037536.1 mouse_genomes_project 10 107289624 107289746 - Gm25342 snoRNA snoRNA MGP_WSBEiJ_T0024219.1 MGP_WSBEiJ_G0016531.1 mouse_genomes_project 10 31904407 31919430 + MGP_WSBEiJ_P0024219 Rsph4a protein_coding protein_coding MGP_WSBEiJ_T0098886.1 MGP_WSBEiJ_G0037549.1 mouse_genomes_project 10 130811811 130811946 + Gm23182 snoRNA snoRNA MGP_WSBEiJ_T0006054.1 MGP_WSBEiJ_G0005056.1 mouse_genomes_project 10 96116731 96127992 + 5730420D15Rik lincRNA lincRNA MGP_WSBEiJ_T0026048.1 MGP_WSBEiJ_G0017020.1 mouse_genomes_project 10 89109719 89116240 + MGP_WSBEiJ_P0026048 Arl1 protein_coding protein_coding MGP_WSBEiJ_T0026049.1 MGP_WSBEiJ_G0017020.1 mouse_genomes_project 10 89110422 89124894 + MGP_WSBEiJ_P0026049 Arl1 protein_coding protein_coding MGP_WSBEiJ_T0025436.1 MGP_WSBEiJ_G0016869.1 mouse_genomes_project 10 79926579 79927816 - Polr2e protein_coding retained_intron MGP_WSBEiJ_T0025437.1 MGP_WSBEiJ_G0016869.1 mouse_genomes_project 10 79926579 79930341 - Polr2e protein_coding retained_intron MGP_WSBEiJ_T0025438.1 MGP_WSBEiJ_G0016869.1 mouse_genomes_project 10 79926579 79930426 - MGP_WSBEiJ_P0025438 Polr2e protein_coding protein_coding MGP_WSBEiJ_T0025439.1 MGP_WSBEiJ_G0016869.1 mouse_genomes_project 10 79926581 79930281 - Polr2e protein_coding retained_intron MGP_WSBEiJ_T0025440.1 MGP_WSBEiJ_G0016869.1 mouse_genomes_project 10 79926805 79930332 - Polr2e protein_coding retained_intron MGP_WSBEiJ_T0025780.1 MGP_WSBEiJ_G0016953.1 mouse_genomes_project 10 81542474 81548338 - Gna15 protein_coding retained_intron MGP_WSBEiJ_T0025781.1 MGP_WSBEiJ_G0016953.1 mouse_genomes_project 10 81542481 81566889 - MGP_WSBEiJ_P0025781 Gna15 protein_coding protein_coding MGP_WSBEiJ_T0025782.1 MGP_WSBEiJ_G0016953.1 mouse_genomes_project 10 81543255 81552801 - Gna15 protein_coding retained_intron MGP_WSBEiJ_T0023844.1 MGP_WSBEiJ_G0016409.1 mouse_genomes_project 10 5770563 5940996 - MGP_WSBEiJ_P0023844 Sash1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0023845.1 MGP_WSBEiJ_G0016409.1 mouse_genomes_project 10 5770573 5941208 - MGP_WSBEiJ_P0023845 Sash1 protein_coding protein_coding MGP_WSBEiJ_T0009484.1 MGP_WSBEiJ_G0007641.1 mouse_genomes_project 10 124818330 124818431 + Mir8104 miRNA miRNA MGP_WSBEiJ_T0012174.1 MGP_WSBEiJ_G0010304.1 mouse_genomes_project 10 60100976 60101370 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012181.1 MGP_WSBEiJ_G0010311.1 mouse_genomes_project 10 75160784 75161208 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024013.1 MGP_WSBEiJ_G0016452.1 mouse_genomes_project 10 17070687 17088886 + MGP_WSBEiJ_P0024013 protein_coding protein_coding MGP_WSBEiJ_T0025330.1 MGP_WSBEiJ_G0016838.1 mouse_genomes_project 10 79480498 79500515 - MGP_WSBEiJ_P0025330 Shc2 protein_coding protein_coding MGP_WSBEiJ_T0025331.1 MGP_WSBEiJ_G0016838.1 mouse_genomes_project 10 79480655 79485328 - Shc2 protein_coding retained_intron MGP_WSBEiJ_T0025332.1 MGP_WSBEiJ_G0016838.1 mouse_genomes_project 10 79482695 79485684 - Shc2 protein_coding retained_intron MGP_WSBEiJ_T0026064.1 MGP_WSBEiJ_G0017024.1 mouse_genomes_project 10 89848010 89885940 - MGP_WSBEiJ_P0026064 Gas2l3 protein_coding protein_coding MGP_WSBEiJ_T0026065.1 MGP_WSBEiJ_G0017024.1 mouse_genomes_project 10 89848010 89885940 - MGP_WSBEiJ_P0026065 Gas2l3 protein_coding protein_coding MGP_WSBEiJ_T0006036.1 MGP_WSBEiJ_G0005050.1 mouse_genomes_project 10 91657514 91658594 + Gm26765 lincRNA lincRNA MGP_WSBEiJ_T0024822.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66197498 66294508 + Jmjd1c protein_coding retained_intron MGP_WSBEiJ_T0024823.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66197778 66260760 + Jmjd1c protein_coding retained_intron MGP_WSBEiJ_T0024824.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66197865 66328977 + MGP_WSBEiJ_P0024824 Jmjd1c protein_coding protein_coding MGP_WSBEiJ_T0024825.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66229863 66360678 + MGP_WSBEiJ_P0024825 Jmjd1c protein_coding protein_coding MGP_WSBEiJ_T0024826.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66229863 66360679 + MGP_WSBEiJ_P0024826 Jmjd1c protein_coding protein_coding MGP_WSBEiJ_T0024827.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66288491 66320175 + Jmjd1c protein_coding retained_intron MGP_WSBEiJ_T0024828.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66288495 66294510 + Jmjd1c protein_coding retained_intron MGP_WSBEiJ_T0024829.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66321743 66322360 + Jmjd1c protein_coding retained_intron MGP_WSBEiJ_T0024830.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66342155 66356670 + MGP_WSBEiJ_P0024830 Jmjd1c protein_coding protein_coding MGP_WSBEiJ_T0024831.1 MGP_WSBEiJ_G0016717.1 mouse_genomes_project 10 66342929 66349425 + Jmjd1c protein_coding retained_intron MGP_WSBEiJ_T0025112.1 MGP_WSBEiJ_G0016773.1 mouse_genomes_project 10 75863956 75871258 + MGP_WSBEiJ_P0025112 S100b protein_coding protein_coding MGP_WSBEiJ_T0026697.1 MGP_WSBEiJ_G0017221.1 mouse_genomes_project 10 130271370 130285215 + MGP_WSBEiJ_P0026697 Rdh19 protein_coding protein_coding MGP_WSBEiJ_T0025239.1 MGP_WSBEiJ_G0016806.1 mouse_genomes_project 10 77718880 77746463 - MGP_WSBEiJ_P0025239 Pfkl protein_coding protein_coding MGP_WSBEiJ_T0025240.1 MGP_WSBEiJ_G0016806.1 mouse_genomes_project 10 77722390 77724104 - Pfkl protein_coding retained_intron MGP_WSBEiJ_T0025241.1 MGP_WSBEiJ_G0016806.1 mouse_genomes_project 10 77731471 77734168 - Pfkl protein_coding retained_intron MGP_WSBEiJ_T0025242.1 MGP_WSBEiJ_G0016806.1 mouse_genomes_project 10 77734913 77746739 - Pfkl protein_coding processed_transcript MGP_WSBEiJ_T0025954.1 MGP_WSBEiJ_G0016998.1 mouse_genomes_project 10 86295685 86764711 - MGP_WSBEiJ_P0025954 Syn3 protein_coding protein_coding MGP_WSBEiJ_T0025955.1 MGP_WSBEiJ_G0016998.1 mouse_genomes_project 10 86297983 86307368 - Syn3 protein_coding processed_transcript MGP_WSBEiJ_T0025956.1 MGP_WSBEiJ_G0016998.1 mouse_genomes_project 10 86310976 86757713 - Syn3 protein_coding retained_intron MGP_WSBEiJ_T0025957.1 MGP_WSBEiJ_G0016998.1 mouse_genomes_project 10 86538297 86764737 - MGP_WSBEiJ_P0025957 Syn3 protein_coding protein_coding MGP_WSBEiJ_T0025962.1 MGP_WSBEiJ_G0016998.1 mouse_genomes_project 10 86608406 86757713 - Syn3 protein_coding retained_intron MGP_WSBEiJ_T0025963.1 MGP_WSBEiJ_G0016998.1 mouse_genomes_project 10 86611777 86764751 - Syn3 protein_coding retained_intron MGP_WSBEiJ_T0099989.1 MGP_WSBEiJ_G0038639.1 mouse_genomes_project 10 26671915 26710933 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099990.1 MGP_WSBEiJ_G0038639.1 mouse_genomes_project 10 26710494 26712271 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0025286.1 MGP_WSBEiJ_G0016818.1 mouse_genomes_project 10 78363646 78373642 + MGP_WSBEiJ_P0025286 Ilvbl protein_coding protein_coding MGP_WSBEiJ_T0025493.1 MGP_WSBEiJ_G0016877.1 mouse_genomes_project 10 80080414 80082617 + MGP_WSBEiJ_P0025493 1600002K03Rik protein_coding protein_coding MGP_WSBEiJ_T0026151.1 MGP_WSBEiJ_G0017038.1 mouse_genomes_project 10 93830545 93896858 - MGP_WSBEiJ_P0026151 Elk3 protein_coding protein_coding MGP_WSBEiJ_T0026152.1 MGP_WSBEiJ_G0017038.1 mouse_genomes_project 10 93832429 93896530 - MGP_WSBEiJ_P0026152 Elk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026153.1 MGP_WSBEiJ_G0017038.1 mouse_genomes_project 10 93832429 93896692 - MGP_WSBEiJ_P0026153 Elk3 protein_coding protein_coding MGP_WSBEiJ_T0026154.1 MGP_WSBEiJ_G0017038.1 mouse_genomes_project 10 93869555 93896858 - Elk3 protein_coding retained_intron MGP_WSBEiJ_T0100447.1 MGP_WSBEiJ_G0038906.1 mouse_genomes_project 10 4521963 4553153 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0002969.1 MGP_WSBEiJ_G0002782.1 mouse_genomes_project 10 61942356 61942866 + antisense antisense MGP_WSBEiJ_T0025817.1 MGP_WSBEiJ_G0016958.1 mouse_genomes_project 10 81657218 81674187 + BC025920 protein_coding processed_transcript MGP_WSBEiJ_T0025818.1 MGP_WSBEiJ_G0016958.1 mouse_genomes_project 10 81657251 81660785 + MGP_WSBEiJ_P0025818 BC025920 protein_coding protein_coding MGP_WSBEiJ_T0025819.1 MGP_WSBEiJ_G0016958.1 mouse_genomes_project 10 81657831 81660494 + MGP_WSBEiJ_P0025819 BC025920 protein_coding protein_coding MGP_WSBEiJ_T0025820.1 MGP_WSBEiJ_G0016958.1 mouse_genomes_project 10 81657831 81660494 + MGP_WSBEiJ_P0025820 BC025920 protein_coding protein_coding MGP_WSBEiJ_T0025821.1 MGP_WSBEiJ_G0016958.1 mouse_genomes_project 10 81657973 81660758 + MGP_WSBEiJ_P0025821 BC025920 protein_coding protein_coding MGP_WSBEiJ_T0025749.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81407273 81411201 + MGP_WSBEiJ_P0025749 Dohh protein_coding protein_coding MGP_WSBEiJ_T0025750.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81407304 81410300 + MGP_WSBEiJ_P0025750 Dohh protein_coding protein_coding MGP_WSBEiJ_T0025751.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81407311 81414419 + MGP_WSBEiJ_P0025751 Dohh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025752.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81407312 81408950 + Dohh protein_coding retained_intron MGP_WSBEiJ_T0025753.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81407740 81408843 + MGP_WSBEiJ_P0025753 Dohh protein_coding protein_coding MGP_WSBEiJ_T0025754.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81408469 81410530 + MGP_WSBEiJ_P0025754 Dohh protein_coding protein_coding MGP_WSBEiJ_T0025755.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81410165 81413717 + MGP_WSBEiJ_P0025755 Dohh protein_coding protein_coding MGP_WSBEiJ_T0025756.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81411861 81414126 + Dohh protein_coding processed_transcript MGP_WSBEiJ_T0025757.1 MGP_WSBEiJ_G0016947.1 mouse_genomes_project 10 81413187 81413994 + Dohh protein_coding retained_intron MGP_WSBEiJ_T0097162.1 MGP_WSBEiJ_G0035843.1 mouse_genomes_project 10 2053026 2053308 - Gm25694 ribozyme ribozyme MGP_WSBEiJ_T0025760.1 MGP_WSBEiJ_G0016949.1 mouse_genomes_project 10 81419037 81456189 - MGP_WSBEiJ_P0025760 Nfic protein_coding protein_coding MGP_WSBEiJ_T0025761.1 MGP_WSBEiJ_G0016949.1 mouse_genomes_project 10 81421987 81456175 - MGP_WSBEiJ_P0025761 Nfic protein_coding protein_coding MGP_WSBEiJ_T0025762.1 MGP_WSBEiJ_G0016949.1 mouse_genomes_project 10 81421987 81456116 - MGP_WSBEiJ_P0025762 Nfic protein_coding protein_coding MGP_WSBEiJ_T0025763.1 MGP_WSBEiJ_G0016949.1 mouse_genomes_project 10 81422357 81423715 - Nfic protein_coding processed_transcript MGP_WSBEiJ_T0025764.1 MGP_WSBEiJ_G0016949.1 mouse_genomes_project 10 81423929 81432308 - MGP_WSBEiJ_P0025764 Nfic protein_coding protein_coding MGP_WSBEiJ_T0025765.1 MGP_WSBEiJ_G0016949.1 mouse_genomes_project 10 81424113 81459982 - MGP_WSBEiJ_P0025765 Nfic protein_coding protein_coding MGP_WSBEiJ_T0006000.1 MGP_WSBEiJ_G0005021.1 mouse_genomes_project 10 38189463 38198225 + 4930547M16Rik lincRNA lincRNA MGP_WSBEiJ_T0097645.1 MGP_WSBEiJ_G0036308.1 mouse_genomes_project 10 79874055 79874162 + Gm26243 snRNA snRNA MGP_WSBEiJ_T0024671.1 MGP_WSBEiJ_G0016679.1 mouse_genomes_project 10 60400977 60435008 + MGP_WSBEiJ_P0024671 Npffr1 protein_coding protein_coding MGP_WSBEiJ_T0024192.1 MGP_WSBEiJ_G0016519.1 mouse_genomes_project 10 28462415 28476021 - MGP_WSBEiJ_P0024192 Hint3 protein_coding protein_coding MGP_WSBEiJ_T0024193.1 MGP_WSBEiJ_G0016519.1 mouse_genomes_project 10 28462623 28475875 - MGP_WSBEiJ_P0024193 Hint3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024194.1 MGP_WSBEiJ_G0016519.1 mouse_genomes_project 10 28462657 28475879 - MGP_WSBEiJ_P0024194 Hint3 protein_coding protein_coding MGP_WSBEiJ_T0024465.1 MGP_WSBEiJ_G0016615.1 mouse_genomes_project 10 50332738 50349864 - MGP_WSBEiJ_P0024465 Gprc6a protein_coding protein_coding MGP_WSBEiJ_T0006026.1 MGP_WSBEiJ_G0005041.1 mouse_genomes_project 10 80649963 80657137 + Gm26541 lincRNA lincRNA MGP_WSBEiJ_T0000799.1 MGP_WSBEiJ_G0000738.1 mouse_genomes_project 10 108695327 108696267 - TEC TEC MGP_WSBEiJ_T0098830.1 MGP_WSBEiJ_G0037493.1 mouse_genomes_project 10 8474827 8474965 - Gm25979 snoRNA snoRNA MGP_WSBEiJ_T0025988.1 MGP_WSBEiJ_G0017007.1 mouse_genomes_project 10 87773091 87775936 - MGP_WSBEiJ_P0025988 Ascl1 protein_coding protein_coding MGP_WSBEiJ_T0024592.1 MGP_WSBEiJ_G0016659.1 mouse_genomes_project 10 58665894 58682461 - MGP_WSBEiJ_P0024592 Anapc16 protein_coding protein_coding MGP_WSBEiJ_T0024593.1 MGP_WSBEiJ_G0016659.1 mouse_genomes_project 10 58666393 58682437 - MGP_WSBEiJ_P0024593 Anapc16 protein_coding protein_coding MGP_WSBEiJ_T0024594.1 MGP_WSBEiJ_G0016659.1 mouse_genomes_project 10 58666889 58668860 - Anapc16 protein_coding processed_transcript MGP_WSBEiJ_T0024595.1 MGP_WSBEiJ_G0016659.1 mouse_genomes_project 10 58666908 58682321 - MGP_WSBEiJ_P0024595 Anapc16 protein_coding protein_coding MGP_WSBEiJ_T0024596.1 MGP_WSBEiJ_G0016659.1 mouse_genomes_project 10 58666956 58682412 - MGP_WSBEiJ_P0024596 Anapc16 protein_coding protein_coding MGP_WSBEiJ_T0024597.1 MGP_WSBEiJ_G0016659.1 mouse_genomes_project 10 58667063 58682095 - MGP_WSBEiJ_P0024597 Anapc16 protein_coding protein_coding MGP_WSBEiJ_T0024598.1 MGP_WSBEiJ_G0016659.1 mouse_genomes_project 10 58668842 58669557 - Anapc16 protein_coding retained_intron MGP_WSBEiJ_T0024599.1 MGP_WSBEiJ_G0016659.1 mouse_genomes_project 10 58675127 58677592 - Anapc16 protein_coding retained_intron MGP_WSBEiJ_T0026724.1 MGP_WSBEiJ_G0017230.1 mouse_genomes_project 10 130528109 130565671 + MGP_WSBEiJ_P0026724 Baz2a protein_coding protein_coding MGP_WSBEiJ_T0026725.1 MGP_WSBEiJ_G0017230.1 mouse_genomes_project 10 130532148 130567531 + MGP_WSBEiJ_P0026725 Baz2a protein_coding unknown_likely_coding MGP_WSBEiJ_T0016540.1 MGP_WSBEiJ_G0014560.1 mouse_genomes_project 10 129643615 129645978 + processed_transcript processed_transcript MGP_WSBEiJ_T0023758.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809369 4050324 + MGP_WSBEiJ_P0023758 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023759.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809369 4109717 + MGP_WSBEiJ_P0023759 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023760.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809456 3916537 + MGP_WSBEiJ_P0023760 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023761.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809456 3915782 + MGP_WSBEiJ_P0023761 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023762.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809456 3915782 + MGP_WSBEiJ_P0023762 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023763.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809456 3915782 + MGP_WSBEiJ_P0023763 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023764.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809456 3915782 + MGP_WSBEiJ_P0023764 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023765.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809456 3890393 + MGP_WSBEiJ_P0023765 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023766.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3809456 4110062 + MGP_WSBEiJ_P0023766 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023767.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843393 3916272 + MGP_WSBEiJ_P0023767 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023768.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843486 4109693 + MGP_WSBEiJ_P0023768 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023769.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 4109693 + MGP_WSBEiJ_P0023769 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023770.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 4050384 + MGP_WSBEiJ_P0023770 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023771.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 3896059 + MGP_WSBEiJ_P0023771 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023772.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 3892068 + MGP_WSBEiJ_P0023772 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023773.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 3902374 + MGP_WSBEiJ_P0023773 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023774.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 4109978 + MGP_WSBEiJ_P0023774 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023775.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 3903613 + MGP_WSBEiJ_P0023775 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023776.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 3905082 + MGP_WSBEiJ_P0023776 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023777.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 4109717 + MGP_WSBEiJ_P0023777 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023778.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 4050374 + MGP_WSBEiJ_P0023778 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023779.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 4110696 + MGP_WSBEiJ_P0023779 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023780.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 3905064 + MGP_WSBEiJ_P0023780 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023781.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 4109998 + MGP_WSBEiJ_P0023781 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023782.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 4109714 + MGP_WSBEiJ_P0023782 Oprm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023783.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843601 3905239 + MGP_WSBEiJ_P0023783 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023784.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843629 3903648 + MGP_WSBEiJ_P0023784 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023785.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843629 3895865 + MGP_WSBEiJ_P0023785 Oprm1 protein_coding protein_coding MGP_WSBEiJ_T0023786.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843767 4109998 + Oprm1 protein_coding processed_transcript MGP_WSBEiJ_T0023787.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843817 3890340 + Oprm1 protein_coding processed_transcript MGP_WSBEiJ_T0023788.1 MGP_WSBEiJ_G0016395.1 mouse_genomes_project 10 3843891 3915911 + Oprm1 protein_coding processed_transcript MGP_WSBEiJ_T0099987.1 MGP_WSBEiJ_G0038638.1 mouse_genomes_project 10 7718861 7729224 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099988.1 MGP_WSBEiJ_G0038638.1 mouse_genomes_project 10 7725961 7726958 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0098888.1 MGP_WSBEiJ_G0037551.1 mouse_genomes_project 10 132268240 132268364 + Gm24717 snoRNA snoRNA MGP_WSBEiJ_T0026261.1 MGP_WSBEiJ_G0017079.1 mouse_genomes_project 10 101372905 101421532 - MGP_WSBEiJ_P0026261 Tmtc3 protein_coding protein_coding MGP_WSBEiJ_T0026262.1 MGP_WSBEiJ_G0017079.1 mouse_genomes_project 10 101376758 101421507 - MGP_WSBEiJ_P0026262 Tmtc3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026263.1 MGP_WSBEiJ_G0017079.1 mouse_genomes_project 10 101377198 101421529 - MGP_WSBEiJ_P0026263 Tmtc3 protein_coding protein_coding MGP_WSBEiJ_T0026264.1 MGP_WSBEiJ_G0017079.1 mouse_genomes_project 10 101407007 101421521 - Tmtc3 protein_coding retained_intron MGP_WSBEiJ_T0026265.1 MGP_WSBEiJ_G0017079.1 mouse_genomes_project 10 101408230 101421449 - MGP_WSBEiJ_P0026265 Tmtc3 protein_coding protein_coding MGP_WSBEiJ_T0026266.1 MGP_WSBEiJ_G0017079.1 mouse_genomes_project 10 101411771 101421508 - MGP_WSBEiJ_P0026266 Tmtc3 protein_coding protein_coding MGP_WSBEiJ_T0024311.1 MGP_WSBEiJ_G0016567.1 mouse_genomes_project 10 39007057 39036932 + MGP_WSBEiJ_P0024311 Ddo protein_coding protein_coding MGP_WSBEiJ_T0012199.1 MGP_WSBEiJ_G0010329.1 mouse_genomes_project 10 124219644 124220290 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024652.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59946025 59966043 + MGP_WSBEiJ_P0024652 Tbata protein_coding protein_coding MGP_WSBEiJ_T0024653.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59946035 59956488 + MGP_WSBEiJ_P0024653 Tbata protein_coding protein_coding MGP_WSBEiJ_T0024654.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59946057 59966048 + MGP_WSBEiJ_P0024654 Tbata protein_coding protein_coding MGP_WSBEiJ_T0024655.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59948449 59959106 + MGP_WSBEiJ_P0024655 Tbata protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024656.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59948491 59966029 + MGP_WSBEiJ_P0024656 Tbata protein_coding unknown_likely_coding MGP_WSBEiJ_T0024657.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59950760 59956485 + Tbata protein_coding processed_transcript MGP_WSBEiJ_T0024658.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59950760 59956485 + Tbata protein_coding processed_transcript MGP_WSBEiJ_T0024659.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59950760 59956485 + Tbata protein_coding processed_transcript MGP_WSBEiJ_T0024660.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59950760 59956484 + MGP_WSBEiJ_P0024660 Tbata protein_coding protein_coding MGP_WSBEiJ_T0024661.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59950902 59956485 + Tbata protein_coding processed_transcript MGP_WSBEiJ_T0024662.1 MGP_WSBEiJ_G0016671.1 mouse_genomes_project 10 59951451 59966046 + MGP_WSBEiJ_P0024662 Tbata protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097659.1 MGP_WSBEiJ_G0036322.1 mouse_genomes_project 10 106036349 106036454 - Gm25522 snRNA snRNA MGP_WSBEiJ_T0026873.1 MGP_WSBEiJ_G0017298.1 mouse_genomes_project 10 132168030 132168963 - MGP_WSBEiJ_P0026873 Olfr796 protein_coding protein_coding MGP_WSBEiJ_T0026874.1 MGP_WSBEiJ_G0017298.1 mouse_genomes_project 10 132168030 132173606 - MGP_WSBEiJ_P0026874 Olfr796 protein_coding protein_coding MGP_WSBEiJ_T0025964.1 MGP_WSBEiJ_G0017000.1 mouse_genomes_project 10 86921736 86923188 + MGP_WSBEiJ_P0025964 Gm6729 protein_coding protein_coding MGP_WSBEiJ_T0026842.1 MGP_WSBEiJ_G0017275.1 mouse_genomes_project 10 131508077 131512208 + MGP_WSBEiJ_P0026842 Olfr9 protein_coding protein_coding MGP_WSBEiJ_T0026800.1 MGP_WSBEiJ_G0017255.1 mouse_genomes_project 10 131044607 131067194 - MGP_WSBEiJ_P0026800 Erbb3 protein_coding protein_coding MGP_WSBEiJ_T0024507.1 MGP_WSBEiJ_G0016632.1 mouse_genomes_project 10 54861965 55086600 - MGP_WSBEiJ_P0024507 Tbc1d32 protein_coding protein_coding MGP_WSBEiJ_T0024459.1 MGP_WSBEiJ_G0016610.1 mouse_genomes_project 10 49286672 49556219 + MGP_WSBEiJ_P0024459 Ascc3 protein_coding protein_coding MGP_WSBEiJ_T0002987.1 MGP_WSBEiJ_G0002798.1 mouse_genomes_project 10 80739755 80741846 - Gm17151 antisense antisense MGP_WSBEiJ_T0009450.1 MGP_WSBEiJ_G0007607.1 mouse_genomes_project 10 78310445 78310567 + Gm27541 miRNA miRNA MGP_WSBEiJ_T0098868.1 MGP_WSBEiJ_G0037531.1 mouse_genomes_project 10 96634947 96635080 + Gm24433 snoRNA snoRNA MGP_WSBEiJ_T0026239.1 MGP_WSBEiJ_G0017065.1 mouse_genomes_project 10 98390269 98398687 + MGP_WSBEiJ_P0026239 Lum protein_coding protein_coding MGP_WSBEiJ_T0024494.1 MGP_WSBEiJ_G0016630.1 mouse_genomes_project 10 52433316 52556068 - MGP_WSBEiJ_P0024494 Fam184a protein_coding protein_coding MGP_WSBEiJ_T0024495.1 MGP_WSBEiJ_G0016630.1 mouse_genomes_project 10 52433537 52498210 - MGP_WSBEiJ_P0024495 Fam184a protein_coding protein_coding MGP_WSBEiJ_T0024496.1 MGP_WSBEiJ_G0016630.1 mouse_genomes_project 10 52433540 52455823 - MGP_WSBEiJ_P0024496 Fam184a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024497.1 MGP_WSBEiJ_G0016630.1 mouse_genomes_project 10 52433541 52502740 - MGP_WSBEiJ_P0024497 Fam184a protein_coding protein_coding MGP_WSBEiJ_T0024498.1 MGP_WSBEiJ_G0016630.1 mouse_genomes_project 10 52433801 52447956 - MGP_WSBEiJ_P0024498 Fam184a protein_coding protein_coding MGP_WSBEiJ_T0024499.1 MGP_WSBEiJ_G0016630.1 mouse_genomes_project 10 52433805 52438441 - MGP_WSBEiJ_P0024499 Fam184a protein_coding protein_coding MGP_WSBEiJ_T0024500.1 MGP_WSBEiJ_G0016630.1 mouse_genomes_project 10 52438351 52480926 - Fam184a protein_coding processed_transcript MGP_WSBEiJ_T0024501.1 MGP_WSBEiJ_G0016630.1 mouse_genomes_project 10 52500383 52556097 - Fam184a protein_coding retained_intron MGP_WSBEiJ_T0012153.1 MGP_WSBEiJ_G0010283.1 mouse_genomes_project 10 19851338 19897234 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024074.1 MGP_WSBEiJ_G0016470.1 mouse_genomes_project 10 19651157 19880835 + MGP_WSBEiJ_P0024074 protein_coding protein_coding MGP_WSBEiJ_T0024077.1 MGP_WSBEiJ_G0016470.1 mouse_genomes_project 10 19869668 19880832 + MGP_WSBEiJ_P0024077 protein_coding protein_coding MGP_WSBEiJ_T0024078.1 MGP_WSBEiJ_G0016470.1 mouse_genomes_project 10 19870066 19880835 + MGP_WSBEiJ_P0024078 protein_coding protein_coding MGP_WSBEiJ_T0025307.1 MGP_WSBEiJ_G0016831.1 mouse_genomes_project 10 78859355 78891179 - MGP_WSBEiJ_P0025307 2610008E11Rik protein_coding protein_coding MGP_WSBEiJ_T0098850.1 MGP_WSBEiJ_G0037513.1 mouse_genomes_project 10 39624131 39624263 + Gm25526 snoRNA snoRNA MGP_WSBEiJ_T0025652.1 MGP_WSBEiJ_G0016923.1 mouse_genomes_project 10 81032999 81048975 - MGP_WSBEiJ_P0025652 Sgta protein_coding unknown_likely_coding MGP_WSBEiJ_T0025653.1 MGP_WSBEiJ_G0016923.1 mouse_genomes_project 10 81033005 81048977 - MGP_WSBEiJ_P0025653 Sgta protein_coding protein_coding MGP_WSBEiJ_T0026861.1 MGP_WSBEiJ_G0017288.1 mouse_genomes_project 10 131977853 131978813 + MGP_WSBEiJ_P0026861 Olfr784 protein_coding protein_coding MGP_WSBEiJ_T0023885.1 MGP_WSBEiJ_G0016420.1 mouse_genomes_project 10 9510957 9671250 - MGP_WSBEiJ_P0023885 Utrn protein_coding unknown_likely_coding MGP_WSBEiJ_T0023886.1 MGP_WSBEiJ_G0016420.1 mouse_genomes_project 10 9510959 9996682 - MGP_WSBEiJ_P0023886 Utrn protein_coding protein_coding MGP_WSBEiJ_T0023887.1 MGP_WSBEiJ_G0016420.1 mouse_genomes_project 10 9746714 10004295 - MGP_WSBEiJ_P0023887 Utrn protein_coding unknown_likely_coding MGP_WSBEiJ_T0009480.1 MGP_WSBEiJ_G0007637.1 mouse_genomes_project 10 118293165 118293260 - Gm25190 miRNA miRNA MGP_WSBEiJ_T0025914.1 MGP_WSBEiJ_G0016984.1 mouse_genomes_project 10 84803816 84913415 + MGP_WSBEiJ_P0025914 Polr3b protein_coding protein_coding MGP_WSBEiJ_T0009444.1 MGP_WSBEiJ_G0007601.1 mouse_genomes_project 10 75816345 75816429 - Mir678 miRNA miRNA MGP_WSBEiJ_T0024269.1 MGP_WSBEiJ_G0016553.1 mouse_genomes_project 10 37635243 37788006 + MGP_WSBEiJ_P0024269 Fyn protein_coding protein_coding MGP_WSBEiJ_T0024270.1 MGP_WSBEiJ_G0016553.1 mouse_genomes_project 10 37636151 37841157 + MGP_WSBEiJ_P0024270 Fyn protein_coding protein_coding MGP_WSBEiJ_T0024271.1 MGP_WSBEiJ_G0016553.1 mouse_genomes_project 10 37636190 37840199 + MGP_WSBEiJ_P0024271 Fyn protein_coding protein_coding MGP_WSBEiJ_T0024272.1 MGP_WSBEiJ_G0016553.1 mouse_genomes_project 10 37688522 37784192 + MGP_WSBEiJ_P0024272 Fyn protein_coding protein_coding MGP_WSBEiJ_T0024273.1 MGP_WSBEiJ_G0016553.1 mouse_genomes_project 10 37717382 37843519 + MGP_WSBEiJ_P0024273 Fyn protein_coding protein_coding MGP_WSBEiJ_T0024274.1 MGP_WSBEiJ_G0016553.1 mouse_genomes_project 10 37725713 37840131 + MGP_WSBEiJ_P0024274 Fyn protein_coding protein_coding MGP_WSBEiJ_T0024275.1 MGP_WSBEiJ_G0016553.1 mouse_genomes_project 10 37725823 37840131 + MGP_WSBEiJ_P0024275 Fyn protein_coding protein_coding MGP_WSBEiJ_T0024276.1 MGP_WSBEiJ_G0016553.1 mouse_genomes_project 10 37808511 37826644 + Fyn protein_coding processed_transcript MGP_WSBEiJ_T0002983.1 MGP_WSBEiJ_G0002794.1 mouse_genomes_project 10 76193297 76198817 - Gm15343 antisense antisense MGP_WSBEiJ_T0025474.1 MGP_WSBEiJ_G0016874.1 mouse_genomes_project 10 80040740 80046663 + Atp5d protein_coding processed_transcript MGP_WSBEiJ_T0025475.1 MGP_WSBEiJ_G0016874.1 mouse_genomes_project 10 80041661 80050085 + MGP_WSBEiJ_P0025475 Atp5d protein_coding unknown_likely_coding MGP_WSBEiJ_T0025476.1 MGP_WSBEiJ_G0016874.1 mouse_genomes_project 10 80045693 80050076 + MGP_WSBEiJ_P0025476 Atp5d protein_coding protein_coding MGP_WSBEiJ_T0025477.1 MGP_WSBEiJ_G0016874.1 mouse_genomes_project 10 80046577 80050081 + MGP_WSBEiJ_P0025477 Atp5d protein_coding protein_coding MGP_WSBEiJ_T0025478.1 MGP_WSBEiJ_G0016874.1 mouse_genomes_project 10 80046632 80050075 + MGP_WSBEiJ_P0025478 Atp5d protein_coding protein_coding MGP_WSBEiJ_T0024179.1 MGP_WSBEiJ_G0016513.1 mouse_genomes_project 10 27024536 27043145 + MGP_WSBEiJ_P0024179 9330159F19Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0025325.1 MGP_WSBEiJ_G0016836.1 mouse_genomes_project 10 79436764 79448579 - MGP_WSBEiJ_P0025325 Theg protein_coding protein_coding MGP_WSBEiJ_T0025326.1 MGP_WSBEiJ_G0016836.1 mouse_genomes_project 10 79436896 79440536 - Theg protein_coding retained_intron MGP_WSBEiJ_T0025327.1 MGP_WSBEiJ_G0016836.1 mouse_genomes_project 10 79436896 79448774 - MGP_WSBEiJ_P0025327 Theg protein_coding protein_coding MGP_WSBEiJ_T0025710.1 MGP_WSBEiJ_G0016938.1 mouse_genomes_project 10 81285912 81303990 - MGP_WSBEiJ_P0025710 Tjp3 protein_coding protein_coding MGP_WSBEiJ_T0024451.1 MGP_WSBEiJ_G0016609.1 mouse_genomes_project 10 47782290 48524883 - MGP_WSBEiJ_P0024451 Grik2 protein_coding protein_coding MGP_WSBEiJ_T0024452.1 MGP_WSBEiJ_G0016609.1 mouse_genomes_project 10 47782673 47933102 - Grik2 protein_coding retained_intron MGP_WSBEiJ_T0024453.1 MGP_WSBEiJ_G0016609.1 mouse_genomes_project 10 47782673 48519368 - MGP_WSBEiJ_P0024453 Grik2 protein_coding protein_coding MGP_WSBEiJ_T0024454.1 MGP_WSBEiJ_G0016609.1 mouse_genomes_project 10 47783557 48519368 - MGP_WSBEiJ_P0024454 Grik2 protein_coding protein_coding MGP_WSBEiJ_T0024455.1 MGP_WSBEiJ_G0016609.1 mouse_genomes_project 10 47783819 48519518 - MGP_WSBEiJ_P0024455 Grik2 protein_coding protein_coding MGP_WSBEiJ_T0024456.1 MGP_WSBEiJ_G0016609.1 mouse_genomes_project 10 47783958 47786762 - Grik2 protein_coding retained_intron MGP_WSBEiJ_T0024457.1 MGP_WSBEiJ_G0016609.1 mouse_genomes_project 10 47788778 48519368 - MGP_WSBEiJ_P0024457 Grik2 protein_coding protein_coding MGP_WSBEiJ_T0024458.1 MGP_WSBEiJ_G0016609.1 mouse_genomes_project 10 48203382 48524871 - MGP_WSBEiJ_P0024458 Grik2 protein_coding protein_coding MGP_WSBEiJ_T0024015.1 MGP_WSBEiJ_G0016454.1 mouse_genomes_project 10 17271741 17275282 - MGP_WSBEiJ_P0024015 Slc35d3 protein_coding protein_coding MGP_WSBEiJ_T0002968.1 MGP_WSBEiJ_G0002781.1 mouse_genomes_project 10 61462998 61464374 + 4933428P19Rik antisense antisense MGP_WSBEiJ_T0023924.1 MGP_WSBEiJ_G0016427.1 mouse_genomes_project 10 10674337 10675955 + MGP_WSBEiJ_P0023924 Fuca2 protein_coding protein_coding MGP_WSBEiJ_T0023925.1 MGP_WSBEiJ_G0016427.1 mouse_genomes_project 10 10674341 10681530 + MGP_WSBEiJ_P0023925 Fuca2 protein_coding protein_coding MGP_WSBEiJ_T0023926.1 MGP_WSBEiJ_G0016427.1 mouse_genomes_project 10 10675778 10691188 + MGP_WSBEiJ_P0023926 Fuca2 protein_coding protein_coding MGP_WSBEiJ_T0023927.1 MGP_WSBEiJ_G0016427.1 mouse_genomes_project 10 10675778 10694655 + MGP_WSBEiJ_P0023927 Fuca2 protein_coding protein_coding MGP_WSBEiJ_T0023928.1 MGP_WSBEiJ_G0016427.1 mouse_genomes_project 10 10675861 10688742 + Fuca2 protein_coding retained_intron MGP_WSBEiJ_T0023929.1 MGP_WSBEiJ_G0016427.1 mouse_genomes_project 10 10681686 10691143 + Fuca2 protein_coding processed_transcript MGP_WSBEiJ_T0098844.1 MGP_WSBEiJ_G0037507.1 mouse_genomes_project 10 34971473 34971620 - Gm22554 snoRNA snoRNA MGP_WSBEiJ_T0024438.1 MGP_WSBEiJ_G0016604.1 mouse_genomes_project 10 43627589 43720881 + MGP_WSBEiJ_P0024438 Prep protein_coding protein_coding MGP_WSBEiJ_T0097609.1 MGP_WSBEiJ_G0036272.1 mouse_genomes_project 10 1485046 1485206 + Gm22739 snRNA snRNA MGP_WSBEiJ_T0025512.1 MGP_WSBEiJ_G0016881.1 mouse_genomes_project 10 80176115 80178977 - MGP_WSBEiJ_P0025512 Gamt protein_coding protein_coding MGP_WSBEiJ_T0025513.1 MGP_WSBEiJ_G0016881.1 mouse_genomes_project 10 80176128 80178933 - MGP_WSBEiJ_P0025513 Gamt protein_coding protein_coding MGP_WSBEiJ_T0025514.1 MGP_WSBEiJ_G0016881.1 mouse_genomes_project 10 80176541 80178883 - Gamt protein_coding retained_intron MGP_WSBEiJ_T0025515.1 MGP_WSBEiJ_G0016881.1 mouse_genomes_project 10 80176757 80177254 - Gamt protein_coding retained_intron MGP_WSBEiJ_T0026615.1 MGP_WSBEiJ_G0017198.1 mouse_genomes_project 10 129621292 129637061 + MGP_WSBEiJ_P0026615 Dctn2 protein_coding protein_coding MGP_WSBEiJ_T0026843.1 MGP_WSBEiJ_G0017276.1 mouse_genomes_project 10 131543637 131549486 + MGP_WSBEiJ_P0026843 Olfr763 protein_coding protein_coding MGP_WSBEiJ_T0024016.1 MGP_WSBEiJ_G0016455.1 mouse_genomes_project 10 17283737 17332032 - MGP_WSBEiJ_P0024016 Pex7 protein_coding protein_coding MGP_WSBEiJ_T0024017.1 MGP_WSBEiJ_G0016455.1 mouse_genomes_project 10 17283905 17332017 - MGP_WSBEiJ_P0024017 Pex7 protein_coding protein_coding MGP_WSBEiJ_T0024018.1 MGP_WSBEiJ_G0016455.1 mouse_genomes_project 10 17284597 17294092 - Pex7 protein_coding retained_intron MGP_WSBEiJ_T0024019.1 MGP_WSBEiJ_G0016455.1 mouse_genomes_project 10 17309218 17331884 - MGP_WSBEiJ_P0024019 Pex7 protein_coding protein_coding MGP_WSBEiJ_T0009496.1 MGP_WSBEiJ_G0007653.1 mouse_genomes_project 10 130928010 130928099 + Mir8105 miRNA miRNA MGP_WSBEiJ_T0012161.1 MGP_WSBEiJ_G0010291.1 mouse_genomes_project 10 40766684 40767162 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002962.1 MGP_WSBEiJ_G0002777.1 mouse_genomes_project 10 43860976 43862965 - Gm15934 antisense antisense MGP_WSBEiJ_T0025875.1 MGP_WSBEiJ_G0016972.1 mouse_genomes_project 10 83009838 83051596 + MGP_WSBEiJ_P0025875 protein_coding protein_coding MGP_WSBEiJ_T0024401.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41327444 41436121 + MGP_WSBEiJ_P0024401 Scml4 protein_coding protein_coding MGP_WSBEiJ_T0024402.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41327609 41403416 + MGP_WSBEiJ_P0024402 Scml4 protein_coding protein_coding MGP_WSBEiJ_T0024403.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41327733 41407162 + MGP_WSBEiJ_P0024403 Scml4 protein_coding protein_coding MGP_WSBEiJ_T0024404.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41327859 41436119 + MGP_WSBEiJ_P0024404 Scml4 protein_coding protein_coding MGP_WSBEiJ_T0024405.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41332580 41403281 + MGP_WSBEiJ_P0024405 Scml4 protein_coding protein_coding MGP_WSBEiJ_T0024406.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41370560 41407940 + MGP_WSBEiJ_P0024406 Scml4 protein_coding protein_coding MGP_WSBEiJ_T0024407.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41407138 41434111 + Scml4 protein_coding retained_intron MGP_WSBEiJ_T0024408.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41407716 41420991 + Scml4 protein_coding retained_intron MGP_WSBEiJ_T0024409.1 MGP_WSBEiJ_G0016591.1 mouse_genomes_project 10 41412666 41434062 + Scml4 protein_coding processed_transcript MGP_WSBEiJ_T0026823.1 MGP_WSBEiJ_G0017267.1 mouse_genomes_project 10 131321678 131325830 - MGP_WSBEiJ_P0026823 Ormdl2 protein_coding protein_coding MGP_WSBEiJ_T0026516.1 MGP_WSBEiJ_G0017160.1 mouse_genomes_project 10 122859627 122877594 + MGP_WSBEiJ_P0026516 4921513I03Rik protein_coding protein_coding MGP_WSBEiJ_T0025939.1 MGP_WSBEiJ_G0016993.1 mouse_genomes_project 10 86117313 86147968 - MGP_WSBEiJ_P0025939 Prdm4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025940.1 MGP_WSBEiJ_G0016993.1 mouse_genomes_project 10 86117313 86147866 - MGP_WSBEiJ_P0025940 Prdm4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025941.1 MGP_WSBEiJ_G0016993.1 mouse_genomes_project 10 86117322 86147872 - MGP_WSBEiJ_P0025941 Prdm4 protein_coding protein_coding MGP_WSBEiJ_T0024248.1 MGP_WSBEiJ_G0016547.1 mouse_genomes_project 10 35338102 35346432 - MGP_WSBEiJ_P0024248 protein_coding protein_coding MGP_WSBEiJ_T0026138.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93343639 93617149 - MGP_WSBEiJ_P0026138 Cfap54 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026139.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93343639 93656543 - MGP_WSBEiJ_P0026139 Cfap54 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026140.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93343647 93656565 - MGP_WSBEiJ_P0026140 Cfap54 protein_coding protein_coding MGP_WSBEiJ_T0026141.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93364808 93403228 - MGP_WSBEiJ_P0026141 Cfap54 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026142.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93472348 93510179 - Cfap54 protein_coding processed_transcript MGP_WSBEiJ_T0026143.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93486374 93510187 - MGP_WSBEiJ_P0026143 Cfap54 protein_coding protein_coding MGP_WSBEiJ_T0026144.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93547162 93612704 - MGP_WSBEiJ_P0026144 Cfap54 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026145.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93598847 93602232 - Cfap54 protein_coding processed_transcript MGP_WSBEiJ_T0026146.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93606473 93656565 - MGP_WSBEiJ_P0026146 Cfap54 protein_coding protein_coding MGP_WSBEiJ_T0026147.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93613300 93656543 - MGP_WSBEiJ_P0026147 Cfap54 protein_coding protein_coding MGP_WSBEiJ_T0026148.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93634027 93656565 - Cfap54 protein_coding retained_intron MGP_WSBEiJ_T0026149.1 MGP_WSBEiJ_G0017036.1 mouse_genomes_project 10 93641026 93644519 - Cfap54 protein_coding processed_transcript MGP_WSBEiJ_T0006009.1 MGP_WSBEiJ_G0005030.1 mouse_genomes_project 10 62324527 62342703 + Gm16145 lincRNA lincRNA MGP_WSBEiJ_T0000802.1 MGP_WSBEiJ_G0000741.1 mouse_genomes_project 10 115617026 115617630 + TEC TEC MGP_WSBEiJ_T0026453.1 MGP_WSBEiJ_G0017146.1 mouse_genomes_project 10 119508833 119514767 + Cpm protein_coding processed_transcript MGP_WSBEiJ_T0026454.1 MGP_WSBEiJ_G0017146.1 mouse_genomes_project 10 119508833 119547721 + Cpm protein_coding retained_intron MGP_WSBEiJ_T0026455.1 MGP_WSBEiJ_G0017146.1 mouse_genomes_project 10 119508833 119568446 + MGP_WSBEiJ_P0026455 Cpm protein_coding protein_coding MGP_WSBEiJ_T0026456.1 MGP_WSBEiJ_G0017146.1 mouse_genomes_project 10 119556072 119566028 + Cpm protein_coding retained_intron MGP_WSBEiJ_T0024808.1 MGP_WSBEiJ_G0016712.1 mouse_genomes_project 10 62363586 62382954 + Dnajc12 protein_coding retained_intron MGP_WSBEiJ_T0024809.1 MGP_WSBEiJ_G0016712.1 mouse_genomes_project 10 62363713 62382410 + MGP_WSBEiJ_P0024809 Dnajc12 protein_coding protein_coding MGP_WSBEiJ_T0099992.1 MGP_WSBEiJ_G0038641.1 mouse_genomes_project 10 89108403 89109963 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099993.1 MGP_WSBEiJ_G0038641.1 mouse_genomes_project 10 89109181 89109578 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0026250.1 MGP_WSBEiJ_G0017073.1 mouse_genomes_project 10 99974165 99979254 + MGP_WSBEiJ_P0026250 Galnt4 protein_coding protein_coding MGP_WSBEiJ_T0026066.1 MGP_WSBEiJ_G0017025.1 mouse_genomes_project 10 89896209 89948745 - MGP_WSBEiJ_P0026066 Nr1h4 protein_coding protein_coding MGP_WSBEiJ_T0026067.1 MGP_WSBEiJ_G0017025.1 mouse_genomes_project 10 89896209 89948736 - MGP_WSBEiJ_P0026067 Nr1h4 protein_coding protein_coding MGP_WSBEiJ_T0026068.1 MGP_WSBEiJ_G0017025.1 mouse_genomes_project 10 89896348 89982359 - MGP_WSBEiJ_P0026068 Nr1h4 protein_coding protein_coding MGP_WSBEiJ_T0024686.1 MGP_WSBEiJ_G0016685.1 mouse_genomes_project 10 60663505 60703724 - Col13a1 protein_coding processed_transcript MGP_WSBEiJ_T0024687.1 MGP_WSBEiJ_G0016685.1 mouse_genomes_project 10 60663505 60691756 - MGP_WSBEiJ_P0024687 Col13a1 protein_coding protein_coding MGP_WSBEiJ_T0024688.1 MGP_WSBEiJ_G0016685.1 mouse_genomes_project 10 60663505 60812172 - MGP_WSBEiJ_P0024688 Col13a1 protein_coding protein_coding MGP_WSBEiJ_T0024689.1 MGP_WSBEiJ_G0016685.1 mouse_genomes_project 10 60663505 60812137 - MGP_WSBEiJ_P0024689 Col13a1 protein_coding protein_coding MGP_WSBEiJ_T0024690.1 MGP_WSBEiJ_G0016685.1 mouse_genomes_project 10 60663505 60812137 - MGP_WSBEiJ_P0024690 Col13a1 protein_coding protein_coding MGP_WSBEiJ_T0024691.1 MGP_WSBEiJ_G0016685.1 mouse_genomes_project 10 60673991 60811185 - Col13a1 protein_coding retained_intron MGP_WSBEiJ_T0024692.1 MGP_WSBEiJ_G0016685.1 mouse_genomes_project 10 60674120 60676781 - Col13a1 protein_coding retained_intron MGP_WSBEiJ_T0024199.1 MGP_WSBEiJ_G0016522.1 mouse_genomes_project 10 29120143 29122062 + MGP_WSBEiJ_P0024199 Gm5422 protein_coding protein_coding MGP_WSBEiJ_T0012176.1 MGP_WSBEiJ_G0010306.1 mouse_genomes_project 10 66370709 66388664 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100454.1 MGP_WSBEiJ_G0038913.1 mouse_genomes_project 10 131582269 131583132 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0024211.1 MGP_WSBEiJ_G0016527.1 mouse_genomes_project 10 31049021 31476530 + MGP_WSBEiJ_P0024211 Trdn protein_coding unknown_likely_coding MGP_WSBEiJ_T0024212.1 MGP_WSBEiJ_G0016527.1 mouse_genomes_project 10 31049467 31478720 + MGP_WSBEiJ_P0024212 Trdn protein_coding protein_coding MGP_WSBEiJ_T0016524.1 MGP_WSBEiJ_G0014553.1 mouse_genomes_project 10 60387849 60417640 - Gm28447 processed_transcript antisense MGP_WSBEiJ_T0016525.1 MGP_WSBEiJ_G0014553.1 mouse_genomes_project 10 60395350 60396328 - Gm28447 processed_transcript retained_intron MGP_WSBEiJ_T0097635.1 MGP_WSBEiJ_G0036298.1 mouse_genomes_project 10 53533287 53533349 - Gm25602 snRNA snRNA MGP_WSBEiJ_T0025948.1 MGP_WSBEiJ_G0016997.1 mouse_genomes_project 10 86261736 86294131 + MGP_WSBEiJ_P0025948 Fbxo7 protein_coding protein_coding MGP_WSBEiJ_T0025949.1 MGP_WSBEiJ_G0016997.1 mouse_genomes_project 10 86261800 86288856 + MGP_WSBEiJ_P0025949 Fbxo7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025950.1 MGP_WSBEiJ_G0016997.1 mouse_genomes_project 10 86261832 86268937 + MGP_WSBEiJ_P0025950 Fbxo7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025951.1 MGP_WSBEiJ_G0016997.1 mouse_genomes_project 10 86262002 86288886 + MGP_WSBEiJ_P0025951 Fbxo7 protein_coding protein_coding MGP_WSBEiJ_T0025952.1 MGP_WSBEiJ_G0016997.1 mouse_genomes_project 10 86272783 86292434 + Fbxo7 protein_coding processed_transcript MGP_WSBEiJ_T0025953.1 MGP_WSBEiJ_G0016997.1 mouse_genomes_project 10 86283014 86287372 + Fbxo7 protein_coding retained_intron MGP_WSBEiJ_T0002649.1 MGP_WSBEiJ_G0002533.1 mouse_genomes_project 10 32537934 32538203 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0025597.1 MGP_WSBEiJ_G0016901.1 mouse_genomes_project 10 80586068 80604047 + MGP_WSBEiJ_P0025597 Csnk1g2 protein_coding protein_coding MGP_WSBEiJ_T0025598.1 MGP_WSBEiJ_G0016901.1 mouse_genomes_project 10 80592934 80604047 + MGP_WSBEiJ_P0025598 Csnk1g2 protein_coding protein_coding MGP_WSBEiJ_T0024218.1 MGP_WSBEiJ_G0016530.1 mouse_genomes_project 10 31856371 31884824 + MGP_WSBEiJ_P0024218 Sult3a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024420.1 MGP_WSBEiJ_G0016596.1 mouse_genomes_project 10 42028634 42044510 - MGP_WSBEiJ_P0024420 1700021F05Rik protein_coding protein_coding MGP_WSBEiJ_T0024421.1 MGP_WSBEiJ_G0016596.1 mouse_genomes_project 10 42028646 42044484 - MGP_WSBEiJ_P0024421 1700021F05Rik protein_coding protein_coding MGP_WSBEiJ_T0024422.1 MGP_WSBEiJ_G0016596.1 mouse_genomes_project 10 42028672 42029357 - 1700021F05Rik protein_coding processed_transcript MGP_WSBEiJ_T0024423.1 MGP_WSBEiJ_G0016596.1 mouse_genomes_project 10 42036671 42044510 - 1700021F05Rik protein_coding processed_transcript MGP_WSBEiJ_T0009491.1 MGP_WSBEiJ_G0007648.1 mouse_genomes_project 10 130519817 130519895 + Mir677 miRNA miRNA MGP_WSBEiJ_T0026302.1 MGP_WSBEiJ_G0017089.1 mouse_genomes_project 10 106363465 106419705 - Tmtc2 protein_coding processed_transcript MGP_WSBEiJ_T0026303.1 MGP_WSBEiJ_G0017089.1 mouse_genomes_project 10 106363465 106780314 - MGP_WSBEiJ_P0026303 Tmtc2 protein_coding protein_coding MGP_WSBEiJ_T0026304.1 MGP_WSBEiJ_G0017089.1 mouse_genomes_project 10 106365306 106419690 - Tmtc2 protein_coding processed_transcript MGP_WSBEiJ_T0026305.1 MGP_WSBEiJ_G0017089.1 mouse_genomes_project 10 106365465 106376595 - Tmtc2 protein_coding processed_transcript MGP_WSBEiJ_T0026306.1 MGP_WSBEiJ_G0017089.1 mouse_genomes_project 10 106457766 106780330 - Tmtc2 protein_coding retained_intron MGP_WSBEiJ_T0026307.1 MGP_WSBEiJ_G0017089.1 mouse_genomes_project 10 106610531 106739033 - Tmtc2 protein_coding processed_transcript MGP_WSBEiJ_T0025166.1 MGP_WSBEiJ_G0016787.1 mouse_genomes_project 10 76701132 76820400 - MGP_WSBEiJ_P0025166 Col18a1 protein_coding protein_coding MGP_WSBEiJ_T0025167.1 MGP_WSBEiJ_G0016787.1 mouse_genomes_project 10 76701135 76763614 - MGP_WSBEiJ_P0025167 Col18a1 protein_coding protein_coding MGP_WSBEiJ_T0025168.1 MGP_WSBEiJ_G0016787.1 mouse_genomes_project 10 76701970 76763643 - MGP_WSBEiJ_P0025168 Col18a1 protein_coding protein_coding MGP_WSBEiJ_T0025169.1 MGP_WSBEiJ_G0016787.1 mouse_genomes_project 10 76729861 76738498 - MGP_WSBEiJ_P0025169 Col18a1 protein_coding protein_coding MGP_WSBEiJ_T0025170.1 MGP_WSBEiJ_G0016787.1 mouse_genomes_project 10 76746732 76763884 - MGP_WSBEiJ_P0025170 Col18a1 protein_coding protein_coding MGP_WSBEiJ_T0024331.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39902047 39906771 - Smpd2 protein_coding retained_intron MGP_WSBEiJ_T0024334.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39903612 39906562 - Smpd2 protein_coding retained_intron MGP_WSBEiJ_T0024335.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39903612 39906781 - MGP_WSBEiJ_P0024335 Smpd2 protein_coding protein_coding MGP_WSBEiJ_T0024336.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39903618 39906771 - Smpd2 protein_coding retained_intron MGP_WSBEiJ_T0024337.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39903989 39904686 - Smpd2 protein_coding retained_intron MGP_WSBEiJ_T0024338.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39904079 39906538 - MGP_WSBEiJ_P0024338 Smpd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024339.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39904471 39906120 - Smpd2 protein_coding retained_intron MGP_WSBEiJ_T0024340.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39904799 39906779 - Smpd2 protein_coding retained_intron MGP_WSBEiJ_T0024341.1 MGP_WSBEiJ_G0016576.1 mouse_genomes_project 10 39905457 39906810 - Smpd2 protein_coding retained_intron MGP_WSBEiJ_T0024075.1 MGP_WSBEiJ_G0016471.1 mouse_genomes_project 10 19869324 19880835 + MGP_WSBEiJ_P0024075 protein_coding protein_coding MGP_WSBEiJ_T0024076.1 MGP_WSBEiJ_G0016471.1 mouse_genomes_project 10 19869646 19880835 + MGP_WSBEiJ_P0024076 protein_coding protein_coding MGP_WSBEiJ_T0002995.1 MGP_WSBEiJ_G0002803.1 mouse_genomes_project 10 81495430 81497244 + Gm16105 antisense antisense MGP_WSBEiJ_T0012141.1 MGP_WSBEiJ_G0010271.1 mouse_genomes_project 10 801509 801818 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024834.1 MGP_WSBEiJ_G0016719.1 mouse_genomes_project 10 66647342 66652980 + MGP_WSBEiJ_P0024834 Egr2 protein_coding protein_coding MGP_WSBEiJ_T0024835.1 MGP_WSBEiJ_G0016719.1 mouse_genomes_project 10 66647450 66653115 + MGP_WSBEiJ_P0024835 Egr2 protein_coding protein_coding MGP_WSBEiJ_T0024836.1 MGP_WSBEiJ_G0016719.1 mouse_genomes_project 10 66650602 66654922 + MGP_WSBEiJ_P0024836 Egr2 protein_coding protein_coding MGP_WSBEiJ_T0024837.1 MGP_WSBEiJ_G0016719.1 mouse_genomes_project 10 66650603 66654922 + MGP_WSBEiJ_P0024837 Egr2 protein_coding protein_coding MGP_WSBEiJ_T0024838.1 MGP_WSBEiJ_G0016719.1 mouse_genomes_project 10 66650603 66651114 + MGP_WSBEiJ_P0024838 Egr2 protein_coding protein_coding MGP_WSBEiJ_T0024839.1 MGP_WSBEiJ_G0016719.1 mouse_genomes_project 10 66650663 66652675 + MGP_WSBEiJ_P0024839 Egr2 protein_coding protein_coding MGP_WSBEiJ_T0024840.1 MGP_WSBEiJ_G0016719.1 mouse_genomes_project 10 66651416 66654922 + MGP_WSBEiJ_P0024840 Egr2 protein_coding protein_coding MGP_WSBEiJ_T0023838.1 MGP_WSBEiJ_G0016407.1 mouse_genomes_project 10 4929855 4984127 - MGP_WSBEiJ_P0023838 Tab2 protein_coding protein_coding MGP_WSBEiJ_T0023839.1 MGP_WSBEiJ_G0016407.1 mouse_genomes_project 10 4931531 4934702 - Tab2 protein_coding retained_intron MGP_WSBEiJ_T0023840.1 MGP_WSBEiJ_G0016407.1 mouse_genomes_project 10 4931641 4935688 - Tab2 protein_coding retained_intron MGP_WSBEiJ_T0023841.1 MGP_WSBEiJ_G0016407.1 mouse_genomes_project 10 4935693 4957441 - MGP_WSBEiJ_P0023841 Tab2 protein_coding protein_coding MGP_WSBEiJ_T0023842.1 MGP_WSBEiJ_G0016407.1 mouse_genomes_project 10 4943569 4948470 - MGP_WSBEiJ_P0023842 Tab2 protein_coding protein_coding MGP_WSBEiJ_T0024344.1 MGP_WSBEiJ_G0016578.1 mouse_genomes_project 10 39937192 39948821 + MGP_WSBEiJ_P0024344 Cd164 protein_coding protein_coding MGP_WSBEiJ_T0024345.1 MGP_WSBEiJ_G0016578.1 mouse_genomes_project 10 39937279 39943053 + Cd164 protein_coding retained_intron MGP_WSBEiJ_T0024346.1 MGP_WSBEiJ_G0016578.1 mouse_genomes_project 10 39937670 39946819 + MGP_WSBEiJ_P0024346 Cd164 protein_coding protein_coding MGP_WSBEiJ_T0024347.1 MGP_WSBEiJ_G0016578.1 mouse_genomes_project 10 39937822 39944657 + Cd164 protein_coding processed_transcript MGP_WSBEiJ_T0025367.1 MGP_WSBEiJ_G0016851.1 mouse_genomes_project 10 79663732 79692657 + MGP_WSBEiJ_P0025367 Palm protein_coding protein_coding MGP_WSBEiJ_T0025368.1 MGP_WSBEiJ_G0016851.1 mouse_genomes_project 10 79663732 79692657 + MGP_WSBEiJ_P0025368 Palm protein_coding protein_coding MGP_WSBEiJ_T0012159.1 MGP_WSBEiJ_G0010289.1 mouse_genomes_project 10 37693122 37693501 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025103.1 MGP_WSBEiJ_G0016770.1 mouse_genomes_project 10 75651011 75710894 - MGP_WSBEiJ_P0025103 Slc5a4b protein_coding protein_coding MGP_WSBEiJ_T0024163.1 MGP_WSBEiJ_G0016508.1 mouse_genomes_project 10 25839875 26374165 + MGP_WSBEiJ_P0024163 Ptprk protein_coding protein_coding MGP_WSBEiJ_T0024164.1 MGP_WSBEiJ_G0016508.1 mouse_genomes_project 10 25840136 26372693 + MGP_WSBEiJ_P0024164 Ptprk protein_coding unknown_likely_coding MGP_WSBEiJ_T0024165.1 MGP_WSBEiJ_G0016508.1 mouse_genomes_project 10 26245580 26372693 + MGP_WSBEiJ_P0024165 Ptprk protein_coding unknown_likely_coding MGP_WSBEiJ_T0006076.1 MGP_WSBEiJ_G0005072.1 mouse_genomes_project 10 131135980 131138330 + lincRNA lincRNA MGP_WSBEiJ_T0098852.1 MGP_WSBEiJ_G0037515.1 mouse_genomes_project 10 45260173 45260304 - Gm23481 snoRNA snoRNA MGP_WSBEiJ_T0025850.1 MGP_WSBEiJ_G0016968.1 mouse_genomes_project 10 82773178 82787971 + MGP_WSBEiJ_P0025850 Tdg protein_coding protein_coding MGP_WSBEiJ_T0025851.1 MGP_WSBEiJ_G0016968.1 mouse_genomes_project 10 82773189 82784655 + Tdg protein_coding processed_transcript MGP_WSBEiJ_T0025852.1 MGP_WSBEiJ_G0016968.1 mouse_genomes_project 10 82773977 82787531 + MGP_WSBEiJ_P0025852 Tdg protein_coding protein_coding MGP_WSBEiJ_T0025853.1 MGP_WSBEiJ_G0016968.1 mouse_genomes_project 10 82784485 82787547 + Tdg protein_coding retained_intron MGP_WSBEiJ_T0025854.1 MGP_WSBEiJ_G0016968.1 mouse_genomes_project 10 82787265 82788093 + Tdg protein_coding retained_intron MGP_WSBEiJ_T0025855.1 MGP_WSBEiJ_G0016968.1 mouse_genomes_project 10 82787679 82792285 + Tdg protein_coding retained_intron MGP_WSBEiJ_T0025856.1 MGP_WSBEiJ_G0016968.1 mouse_genomes_project 10 82791587 82792936 + Tdg protein_coding retained_intron MGP_WSBEiJ_T0026846.1 MGP_WSBEiJ_G0017279.1 mouse_genomes_project 10 131722251 131727436 - MGP_WSBEiJ_P0026846 Olfr770 protein_coding protein_coding MGP_WSBEiJ_T0026847.1 MGP_WSBEiJ_G0017279.1 mouse_genomes_project 10 131722251 131723187 - MGP_WSBEiJ_P0026847 Olfr770 protein_coding protein_coding MGP_WSBEiJ_T0026848.1 MGP_WSBEiJ_G0017279.1 mouse_genomes_project 10 131722797 131728178 - MGP_WSBEiJ_P0026848 Olfr770 protein_coding protein_coding MGP_WSBEiJ_T0026849.1 MGP_WSBEiJ_G0017279.1 mouse_genomes_project 10 131722864 131728182 - MGP_WSBEiJ_P0026849 Olfr770 protein_coding protein_coding MGP_WSBEiJ_T0012196.1 MGP_WSBEiJ_G0010326.1 mouse_genomes_project 10 119286310 119286818 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009421.1 MGP_WSBEiJ_G0007578.1 mouse_genomes_project 10 4866208 4866302 + Mir5104 miRNA miRNA MGP_WSBEiJ_T0024267.1 MGP_WSBEiJ_G0016551.1 mouse_genomes_project 10 37395184 37412181 + MGP_WSBEiJ_P0024267 Tube1 protein_coding protein_coding MGP_WSBEiJ_T0023805.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4645645 4678779 - MGP_WSBEiJ_P0023805 Pcmt1 protein_coding protein_coding MGP_WSBEiJ_T0023806.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4645645 4678435 - MGP_WSBEiJ_P0023806 Pcmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023807.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4645653 4678474 - MGP_WSBEiJ_P0023807 Pcmt1 protein_coding protein_coding MGP_WSBEiJ_T0023808.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4651298 4663441 - MGP_WSBEiJ_P0023808 Pcmt1 protein_coding protein_coding MGP_WSBEiJ_T0023809.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4651298 4678432 - MGP_WSBEiJ_P0023809 Pcmt1 protein_coding protein_coding MGP_WSBEiJ_T0023810.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4653226 4678779 - Pcmt1 protein_coding retained_intron MGP_WSBEiJ_T0023811.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4657894 4700630 - MGP_WSBEiJ_P0023811 Pcmt1 protein_coding protein_coding MGP_WSBEiJ_T0023812.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4661880 4666231 - MGP_WSBEiJ_P0023812 Pcmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023813.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4661905 4700624 - MGP_WSBEiJ_P0023813 Pcmt1 protein_coding protein_coding MGP_WSBEiJ_T0023814.1 MGP_WSBEiJ_G0016400.1 mouse_genomes_project 10 4663250 4678435 - Pcmt1 protein_coding retained_intron MGP_WSBEiJ_T0006057.1 MGP_WSBEiJ_G0005058.1 mouse_genomes_project 10 100183566 100311370 + B530045E10Rik lincRNA lincRNA MGP_WSBEiJ_T0006058.1 MGP_WSBEiJ_G0005058.1 mouse_genomes_project 10 100308847 100311370 + B530045E10Rik lincRNA lincRNA MGP_WSBEiJ_T0026247.1 MGP_WSBEiJ_G0017072.1 mouse_genomes_project 10 99973042 100072327 + MGP_WSBEiJ_P0026247 Poc1b protein_coding protein_coding MGP_WSBEiJ_T0026248.1 MGP_WSBEiJ_G0017072.1 mouse_genomes_project 10 99973088 100071391 + MGP_WSBEiJ_P0026248 Poc1b protein_coding protein_coding MGP_WSBEiJ_T0026249.1 MGP_WSBEiJ_G0017072.1 mouse_genomes_project 10 99973109 100072413 + MGP_WSBEiJ_P0026249 Poc1b protein_coding protein_coding MGP_WSBEiJ_T0026252.1 MGP_WSBEiJ_G0017072.1 mouse_genomes_project 10 100000037 100066106 + MGP_WSBEiJ_P0026252 Poc1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026253.1 MGP_WSBEiJ_G0017072.1 mouse_genomes_project 10 100042552 100071367 + Poc1b protein_coding processed_transcript MGP_WSBEiJ_T0026254.1 MGP_WSBEiJ_G0017072.1 mouse_genomes_project 10 100066208 100071189 + Poc1b protein_coding processed_transcript MGP_WSBEiJ_T0026028.1 MGP_WSBEiJ_G0017017.1 mouse_genomes_project 10 88798872 88818556 + MGP_WSBEiJ_P0026028 Sycp3 protein_coding protein_coding MGP_WSBEiJ_T0026029.1 MGP_WSBEiJ_G0017017.1 mouse_genomes_project 10 88798967 88818557 + MGP_WSBEiJ_P0026029 Sycp3 protein_coding protein_coding MGP_WSBEiJ_T0026030.1 MGP_WSBEiJ_G0017017.1 mouse_genomes_project 10 88798967 88818557 + MGP_WSBEiJ_P0026030 Sycp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024178.1 MGP_WSBEiJ_G0016512.1 mouse_genomes_project 10 26952766 27013839 + MGP_WSBEiJ_P0024178 Soga3 protein_coding protein_coding MGP_WSBEiJ_T0005976.1 MGP_WSBEiJ_G0005002.1 mouse_genomes_project 10 295058 298107 - Gm26752 lincRNA lincRNA MGP_WSBEiJ_T0026811.1 MGP_WSBEiJ_G0017259.1 mouse_genomes_project 10 131169390 131189498 - MGP_WSBEiJ_P0026811 Rab5b protein_coding protein_coding MGP_WSBEiJ_T0098856.1 MGP_WSBEiJ_G0037519.1 mouse_genomes_project 10 57818917 57819044 + Gm23223 snoRNA snoRNA MGP_WSBEiJ_T0002946.1 MGP_WSBEiJ_G0002765.1 mouse_genomes_project 10 18620073 18630180 + Gm26577 antisense antisense MGP_WSBEiJ_T0024855.1 MGP_WSBEiJ_G0016725.1 mouse_genomes_project 10 67594185 67714876 - MGP_WSBEiJ_P0024855 1700040L02Rik protein_coding protein_coding MGP_WSBEiJ_T0024856.1 MGP_WSBEiJ_G0016725.1 mouse_genomes_project 10 67600449 67698711 - MGP_WSBEiJ_P0024856 1700040L02Rik protein_coding protein_coding MGP_WSBEiJ_T0026819.1 MGP_WSBEiJ_G0017265.1 mouse_genomes_project 10 131306035 131309891 - MGP_WSBEiJ_P0026819 Tmem198b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026820.1 MGP_WSBEiJ_G0017265.1 mouse_genomes_project 10 131306770 131309647 - MGP_WSBEiJ_P0026820 Tmem198b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026821.1 MGP_WSBEiJ_G0017265.1 mouse_genomes_project 10 131307024 131310402 - MGP_WSBEiJ_P0026821 Tmem198b protein_coding unknown_likely_coding MGP_WSBEiJ_T0025779.1 MGP_WSBEiJ_G0016952.1 mouse_genomes_project 10 81537904 81540292 - MGP_WSBEiJ_P0025779 S1pr4 protein_coding protein_coding MGP_WSBEiJ_T0011076.1 MGP_WSBEiJ_G0009233.1 mouse_genomes_project 10 49571367 49571657 - Gm23883 misc_RNA misc_RNA MGP_WSBEiJ_T0023979.1 MGP_WSBEiJ_G0016441.1 mouse_genomes_project 10 15487839 15575186 - MGP_WSBEiJ_P0023979 Ect2l protein_coding protein_coding MGP_WSBEiJ_T0023980.1 MGP_WSBEiJ_G0016441.1 mouse_genomes_project 10 15487839 15529265 - MGP_WSBEiJ_P0023980 Ect2l protein_coding unknown_likely_coding MGP_WSBEiJ_T0026822.1 MGP_WSBEiJ_G0017266.1 mouse_genomes_project 10 131310542 131321633 + MGP_WSBEiJ_P0026822 Dnajc14 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026779.1 MGP_WSBEiJ_G0017248.1 mouse_genomes_project 10 130928566 130962135 + MGP_WSBEiJ_P0026779 Smarcc2 protein_coding protein_coding MGP_WSBEiJ_T0026780.1 MGP_WSBEiJ_G0017248.1 mouse_genomes_project 10 130928566 130962135 + MGP_WSBEiJ_P0026780 Smarcc2 protein_coding protein_coding MGP_WSBEiJ_T0026781.1 MGP_WSBEiJ_G0017248.1 mouse_genomes_project 10 130928566 130962135 + MGP_WSBEiJ_P0026781 Smarcc2 protein_coding protein_coding MGP_WSBEiJ_T0024573.1 MGP_WSBEiJ_G0016655.1 mouse_genomes_project 10 58268276 58268612 + MGP_WSBEiJ_P0024573 Gm10322 protein_coding protein_coding MGP_WSBEiJ_T0024560.1 MGP_WSBEiJ_G0016650.1 mouse_genomes_project 10 57848435 57852914 + MGP_WSBEiJ_P0024560 Sowahc protein_coding protein_coding MGP_WSBEiJ_T0026894.1 MGP_WSBEiJ_G0017312.1 mouse_genomes_project 10 132642742 132647301 + MGP_WSBEiJ_P0026894 Olfr821 protein_coding protein_coding MGP_WSBEiJ_T0026895.1 MGP_WSBEiJ_G0017312.1 mouse_genomes_project 10 132646368 132647301 + MGP_WSBEiJ_P0026895 Olfr821 protein_coding protein_coding MGP_WSBEiJ_T0006020.1 MGP_WSBEiJ_G0005037.1 mouse_genomes_project 10 72672660 72794990 - Gm15398 lincRNA lincRNA MGP_WSBEiJ_T0009492.1 MGP_WSBEiJ_G0007649.1 mouse_genomes_project 10 130842106 130842175 - Gm26308 miRNA miRNA MGP_WSBEiJ_T0011075.1 MGP_WSBEiJ_G0009232.1 mouse_genomes_project 10 40935675 40935999 - Gm25277 misc_RNA misc_RNA MGP_WSBEiJ_T0025223.1 MGP_WSBEiJ_G0016804.1 mouse_genomes_project 10 77639845 77700769 - MGP_WSBEiJ_P0025223 Trpm2 protein_coding protein_coding MGP_WSBEiJ_T0025224.1 MGP_WSBEiJ_G0016804.1 mouse_genomes_project 10 77641246 77696173 - Trpm2 protein_coding processed_transcript MGP_WSBEiJ_T0025225.1 MGP_WSBEiJ_G0016804.1 mouse_genomes_project 10 77641384 77663844 - Trpm2 protein_coding retained_intron MGP_WSBEiJ_T0025226.1 MGP_WSBEiJ_G0016804.1 mouse_genomes_project 10 77641442 77666194 - Trpm2 protein_coding retained_intron MGP_WSBEiJ_T0025227.1 MGP_WSBEiJ_G0016804.1 mouse_genomes_project 10 77648137 77652892 - Trpm2 protein_coding retained_intron MGP_WSBEiJ_T0025228.1 MGP_WSBEiJ_G0016804.1 mouse_genomes_project 10 77649370 77672864 - Trpm2 protein_coding retained_intron MGP_WSBEiJ_T0025229.1 MGP_WSBEiJ_G0016804.1 mouse_genomes_project 10 77691511 77700719 - MGP_WSBEiJ_P0025229 Trpm2 protein_coding protein_coding MGP_WSBEiJ_T0025230.1 MGP_WSBEiJ_G0016804.1 mouse_genomes_project 10 77695760 77701478 - Trpm2 protein_coding processed_transcript MGP_WSBEiJ_T0016531.1 MGP_WSBEiJ_G0014555.1 mouse_genomes_project 10 79726648 79730225 - E130317F20Rik processed_transcript processed_transcript MGP_WSBEiJ_T0009441.1 MGP_WSBEiJ_G0007598.1 mouse_genomes_project 10 61042676 61042737 - Mir7662 miRNA miRNA MGP_WSBEiJ_T0009460.1 MGP_WSBEiJ_G0007617.1 mouse_genomes_project 10 81409195 81409261 + Mir6913 miRNA miRNA MGP_WSBEiJ_T0024508.1 MGP_WSBEiJ_G0016633.1 mouse_genomes_project 10 54952295 54962795 + MGP_WSBEiJ_P0024508 Msl3l2 protein_coding protein_coding MGP_WSBEiJ_T0025623.1 MGP_WSBEiJ_G0016910.1 mouse_genomes_project 10 80778924 80783222 + MGP_WSBEiJ_P0025623 Amh protein_coding protein_coding MGP_WSBEiJ_T0025803.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81640810 81647554 - Tle6 protein_coding processed_transcript MGP_WSBEiJ_T0025804.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81640810 81651799 - MGP_WSBEiJ_P0025804 Tle6 protein_coding protein_coding MGP_WSBEiJ_T0025805.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81640811 81645322 - Tle6 protein_coding retained_intron MGP_WSBEiJ_T0025806.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81640811 81642622 - Tle6 protein_coding processed_transcript MGP_WSBEiJ_T0025807.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81640811 81651824 - MGP_WSBEiJ_P0025807 Tle6 protein_coding protein_coding MGP_WSBEiJ_T0025808.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81640813 81647309 - Tle6 protein_coding processed_transcript MGP_WSBEiJ_T0025809.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81641039 81642725 - Tle6 protein_coding retained_intron MGP_WSBEiJ_T0025810.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81643825 81645151 - Tle6 protein_coding retained_intron MGP_WSBEiJ_T0025811.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81644145 81645715 - Tle6 protein_coding retained_intron MGP_WSBEiJ_T0025812.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81645115 81647302 - Tle6 protein_coding processed_transcript MGP_WSBEiJ_T0025813.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81645135 81647295 - Tle6 protein_coding processed_transcript MGP_WSBEiJ_T0025814.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81645859 81647331 - Tle6 protein_coding processed_transcript MGP_WSBEiJ_T0025815.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81645899 81651781 - MGP_WSBEiJ_P0025815 Tle6 protein_coding protein_coding MGP_WSBEiJ_T0025816.1 MGP_WSBEiJ_G0016957.1 mouse_genomes_project 10 81645902 81651997 - MGP_WSBEiJ_P0025816 Tle6 protein_coding protein_coding MGP_WSBEiJ_T0096898.1 MGP_WSBEiJ_G0035579.1 mouse_genomes_project 10 29190690 29190803 - n-R5s76 rRNA rRNA MGP_WSBEiJ_T0024479.1 MGP_WSBEiJ_G0016621.1 mouse_genomes_project 10 51086080 51137263 - MGP_WSBEiJ_P0024479 Gopc protein_coding protein_coding MGP_WSBEiJ_T0024480.1 MGP_WSBEiJ_G0016621.1 mouse_genomes_project 10 51086080 51137263 - MGP_WSBEiJ_P0024480 Gopc protein_coding protein_coding MGP_WSBEiJ_T0024481.1 MGP_WSBEiJ_G0016621.1 mouse_genomes_project 10 51088779 51137037 - MGP_WSBEiJ_P0024481 Gopc protein_coding unknown_likely_coding MGP_WSBEiJ_T0097164.1 MGP_WSBEiJ_G0035845.1 mouse_genomes_project 10 41284572 41284877 - Gm26464 ribozyme ribozyme MGP_WSBEiJ_T0012148.1 MGP_WSBEiJ_G0010278.1 mouse_genomes_project 10 15151012 15151952 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098831.1 MGP_WSBEiJ_G0037494.1 mouse_genomes_project 10 8796176 8796306 + Gm22546 snoRNA snoRNA MGP_WSBEiJ_T0097647.1 MGP_WSBEiJ_G0036310.1 mouse_genomes_project 10 83321636 83321739 - Gm23122 snRNA snRNA MGP_WSBEiJ_T0026763.1 MGP_WSBEiJ_G0017244.1 mouse_genomes_project 10 130841390 130851199 + Ankrd52 protein_coding retained_intron MGP_WSBEiJ_T0026764.1 MGP_WSBEiJ_G0017244.1 mouse_genomes_project 10 130841394 130859700 + MGP_WSBEiJ_P0026764 Ankrd52 protein_coding protein_coding MGP_WSBEiJ_T0026765.1 MGP_WSBEiJ_G0017244.1 mouse_genomes_project 10 130854988 130874349 + MGP_WSBEiJ_P0026765 Ankrd52 protein_coding protein_coding MGP_WSBEiJ_T0009473.1 MGP_WSBEiJ_G0007630.1 mouse_genomes_project 10 97650829 97650918 - Gm24587 miRNA miRNA MGP_WSBEiJ_T0024728.1 MGP_WSBEiJ_G0016692.1 mouse_genomes_project 10 61254821 61296260 - MGP_WSBEiJ_P0024728 Hkdc1 protein_coding protein_coding MGP_WSBEiJ_T0024729.1 MGP_WSBEiJ_G0016692.1 mouse_genomes_project 10 61267660 61272863 - Hkdc1 protein_coding retained_intron MGP_WSBEiJ_T0024730.1 MGP_WSBEiJ_G0016692.1 mouse_genomes_project 10 61283608 61285624 - Hkdc1 protein_coding retained_intron MGP_WSBEiJ_T0024731.1 MGP_WSBEiJ_G0016692.1 mouse_genomes_project 10 61290151 61296177 - Hkdc1 protein_coding retained_intron MGP_WSBEiJ_T0026325.1 MGP_WSBEiJ_G0017098.1 mouse_genomes_project 10 109040232 109199504 - MGP_WSBEiJ_P0026325 Otogl protein_coding protein_coding MGP_WSBEiJ_T0002947.1 MGP_WSBEiJ_G0002766.1 mouse_genomes_project 10 23249629 23375305 + Gm29571 antisense antisense MGP_WSBEiJ_T0023969.1 MGP_WSBEiJ_G0016438.1 mouse_genomes_project 10 15241201 15289075 - MGP_WSBEiJ_P0023969 Heca protein_coding protein_coding MGP_WSBEiJ_T0098876.1 MGP_WSBEiJ_G0037539.1 mouse_genomes_project 10 112209185 112209313 + Gm23698 snoRNA snoRNA MGP_WSBEiJ_T0096895.1 MGP_WSBEiJ_G0035576.1 mouse_genomes_project 10 868208 868317 - Gm23023 rRNA rRNA MGP_WSBEiJ_T0000796.1 MGP_WSBEiJ_G0000735.1 mouse_genomes_project 10 99333775 99334139 - TEC TEC MGP_WSBEiJ_T0024548.1 MGP_WSBEiJ_G0016643.1 mouse_genomes_project 10 57053028 57100548 + MGP_WSBEiJ_P0024548 Ranbp2 protein_coding protein_coding MGP_WSBEiJ_T0098851.1 MGP_WSBEiJ_G0037514.1 mouse_genomes_project 10 43840712 43840841 - Gm26016 snoRNA snoRNA MGP_WSBEiJ_T0009446.1 MGP_WSBEiJ_G0007603.1 mouse_genomes_project 10 78115275 78115333 - Mir7659 miRNA miRNA MGP_WSBEiJ_T0026204.1 MGP_WSBEiJ_G0017051.1 mouse_genomes_project 10 94824290 94847882 + MGP_WSBEiJ_P0026204 Ndufa12 protein_coding protein_coding MGP_WSBEiJ_T0026205.1 MGP_WSBEiJ_G0017051.1 mouse_genomes_project 10 94824339 94847332 + MGP_WSBEiJ_P0026205 Ndufa12 protein_coding protein_coding MGP_WSBEiJ_T0026206.1 MGP_WSBEiJ_G0017051.1 mouse_genomes_project 10 94824368 94847886 + MGP_WSBEiJ_P0026206 Ndufa12 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026207.1 MGP_WSBEiJ_G0017051.1 mouse_genomes_project 10 94824372 94828829 + Ndufa12 protein_coding retained_intron MGP_WSBEiJ_T0026208.1 MGP_WSBEiJ_G0017051.1 mouse_genomes_project 10 94825348 94847167 + MGP_WSBEiJ_P0026208 Ndufa12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003004.1 MGP_WSBEiJ_G0002810.1 mouse_genomes_project 10 87112925 87149660 + Gm16268 antisense antisense MGP_WSBEiJ_T0024623.1 MGP_WSBEiJ_G0016665.1 mouse_genomes_project 10 59069642 59096583 + MGP_WSBEiJ_P0024623 Vsir protein_coding protein_coding MGP_WSBEiJ_T0024624.1 MGP_WSBEiJ_G0016665.1 mouse_genomes_project 10 59069696 59081070 + Vsir protein_coding processed_transcript MGP_WSBEiJ_T0024625.1 MGP_WSBEiJ_G0016665.1 mouse_genomes_project 10 59069698 59080852 + Vsir protein_coding processed_transcript MGP_WSBEiJ_T0024626.1 MGP_WSBEiJ_G0016665.1 mouse_genomes_project 10 59069714 59096567 + MGP_WSBEiJ_P0024626 Vsir protein_coding protein_coding MGP_WSBEiJ_T0024627.1 MGP_WSBEiJ_G0016665.1 mouse_genomes_project 10 59069775 59082921 + Vsir protein_coding retained_intron MGP_WSBEiJ_T0024628.1 MGP_WSBEiJ_G0016665.1 mouse_genomes_project 10 59069803 59091668 + MGP_WSBEiJ_P0024628 Vsir protein_coding protein_coding MGP_WSBEiJ_T0011092.1 MGP_WSBEiJ_G0009249.1 mouse_genomes_project 10 116551286 116551611 - Gm25319 misc_RNA misc_RNA MGP_WSBEiJ_T0024391.1 MGP_WSBEiJ_G0016589.1 mouse_genomes_project 10 41034593 41035503 + Ostm1 protein_coding processed_transcript MGP_WSBEiJ_T0024392.1 MGP_WSBEiJ_G0016589.1 mouse_genomes_project 10 41034606 41163229 + MGP_WSBEiJ_P0024392 Ostm1 protein_coding protein_coding MGP_WSBEiJ_T0024393.1 MGP_WSBEiJ_G0016589.1 mouse_genomes_project 10 41034609 41165398 + MGP_WSBEiJ_P0024393 Ostm1 protein_coding protein_coding MGP_WSBEiJ_T0024394.1 MGP_WSBEiJ_G0016589.1 mouse_genomes_project 10 41141659 41167365 + MGP_WSBEiJ_P0024394 Ostm1 protein_coding protein_coding MGP_WSBEiJ_T0024395.1 MGP_WSBEiJ_G0016589.1 mouse_genomes_project 10 41141709 41164897 + Ostm1 protein_coding retained_intron MGP_WSBEiJ_T0097644.1 MGP_WSBEiJ_G0036307.1 mouse_genomes_project 10 79791336 79791443 + Gm24019 snRNA snRNA MGP_WSBEiJ_T0024031.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17747499 17777492 + MGP_WSBEiJ_P0024031 Bclaf1 protein_coding protein_coding MGP_WSBEiJ_T0024032.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17747502 17775253 + MGP_WSBEiJ_P0024032 Bclaf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024033.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17747514 17777490 + MGP_WSBEiJ_P0024033 Bclaf1 protein_coding protein_coding MGP_WSBEiJ_T0024034.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17747558 17757567 + Bclaf1 protein_coding retained_intron MGP_WSBEiJ_T0024035.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17747559 17775249 + MGP_WSBEiJ_P0024035 Bclaf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024036.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17747567 17775250 + MGP_WSBEiJ_P0024036 Bclaf1 protein_coding protein_coding MGP_WSBEiJ_T0024037.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17758691 17779603 + MGP_WSBEiJ_P0024037 Bclaf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024038.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17761009 17767258 + MGP_WSBEiJ_P0024038 Bclaf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024039.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17764048 17768890 + Bclaf1 protein_coding retained_intron MGP_WSBEiJ_T0024040.1 MGP_WSBEiJ_G0016459.1 mouse_genomes_project 10 17768253 17775193 + Bclaf1 protein_coding retained_intron MGP_WSBEiJ_T0026234.1 MGP_WSBEiJ_G0017061.1 mouse_genomes_project 10 96682376 96790110 + MGP_WSBEiJ_P0026234 Eea1 protein_coding protein_coding MGP_WSBEiJ_T0026853.1 MGP_WSBEiJ_G0017283.1 mouse_genomes_project 10 131844998 132031452 + MGP_WSBEiJ_P0026853 Olfr775 protein_coding protein_coding MGP_WSBEiJ_T0009456.1 MGP_WSBEiJ_G0007613.1 mouse_genomes_project 10 80806665 80806738 + Mir1982 miRNA miRNA MGP_WSBEiJ_T0012143.1 MGP_WSBEiJ_G0010273.1 mouse_genomes_project 10 4616974 4617704 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023935.1 MGP_WSBEiJ_G0016429.1 mouse_genomes_project 10 10730980 10742253 + MGP_WSBEiJ_P0023935 Adat2 protein_coding protein_coding MGP_WSBEiJ_T0097614.1 MGP_WSBEiJ_G0036277.1 mouse_genomes_project 10 9925943 9926043 - Gm23044 snRNA snRNA MGP_WSBEiJ_T0012194.1 MGP_WSBEiJ_G0010324.1 mouse_genomes_project 10 106707186 106708110 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025216.1 MGP_WSBEiJ_G0016799.1 mouse_genomes_project 10 77417906 77418577 + MGP_WSBEiJ_P0025216 Krtap12-1 protein_coding protein_coding MGP_WSBEiJ_T0026291.1 MGP_WSBEiJ_G0017084.1 mouse_genomes_project 10 103552359 103564165 - MGP_WSBEiJ_P0026291 Nts protein_coding unknown_likely_coding MGP_WSBEiJ_T0096903.1 MGP_WSBEiJ_G0035584.1 mouse_genomes_project 10 95476121 95476248 - Gm24186 rRNA rRNA MGP_WSBEiJ_T0024941.1 MGP_WSBEiJ_G0016735.1 mouse_genomes_project 10 70184835 70247659 + MGP_WSBEiJ_P0024941 4930533K18Rik protein_coding protein_coding MGP_WSBEiJ_T0009437.1 MGP_WSBEiJ_G0007594.1 mouse_genomes_project 10 59676089 59676180 + Mir6408 miRNA miRNA MGP_WSBEiJ_T0025172.1 MGP_WSBEiJ_G0016789.1 mouse_genomes_project 10 76930653 76941020 + MGP_WSBEiJ_P0025172 Pofut2 protein_coding protein_coding MGP_WSBEiJ_T0025310.1 MGP_WSBEiJ_G0016834.1 mouse_genomes_project 10 79382890 79390206 - Plpp2 protein_coding processed_transcript MGP_WSBEiJ_T0025311.1 MGP_WSBEiJ_G0016834.1 mouse_genomes_project 10 79383592 79390139 - MGP_WSBEiJ_P0025311 Plpp2 protein_coding protein_coding MGP_WSBEiJ_T0025312.1 MGP_WSBEiJ_G0016834.1 mouse_genomes_project 10 79383947 79390236 - MGP_WSBEiJ_P0025312 Plpp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006078.1 MGP_WSBEiJ_G0005074.1 mouse_genomes_project 10 131584368 131588558 - lincRNA lincRNA MGP_WSBEiJ_T0006025.1 MGP_WSBEiJ_G0005040.1 mouse_genomes_project 10 80532231 80534262 + Gm26710 lincRNA lincRNA MGP_WSBEiJ_T0025530.1 MGP_WSBEiJ_G0016885.1 mouse_genomes_project 10 80241128 80243432 - MGP_WSBEiJ_P0025530 2310011J03Rik protein_coding protein_coding MGP_WSBEiJ_T0024030.1 MGP_WSBEiJ_G0016458.1 mouse_genomes_project 10 17745535 17747324 - MGP_WSBEiJ_P0024030 4933406P04Rik protein_coding protein_coding MGP_WSBEiJ_T0011090.1 MGP_WSBEiJ_G0009247.1 mouse_genomes_project 10 96320975 96321300 + Gm23776 misc_RNA misc_RNA MGP_WSBEiJ_T0025925.1 MGP_WSBEiJ_G0016989.1 mouse_genomes_project 10 85317405 85326153 - MGP_WSBEiJ_P0025925 Mterf2 protein_coding protein_coding MGP_WSBEiJ_T0009459.1 MGP_WSBEiJ_G0007616.1 mouse_genomes_project 10 81282515 81282606 + Mir3057 miRNA miRNA MGP_WSBEiJ_T0002958.1 MGP_WSBEiJ_G0002773.1 mouse_genomes_project 10 40177478 40184649 + BC048559 antisense antisense MGP_WSBEiJ_T0098872.1 MGP_WSBEiJ_G0037535.1 mouse_genomes_project 10 107149813 107149945 - Gm24237 snoRNA snoRNA MGP_WSBEiJ_T0009469.1 MGP_WSBEiJ_G0007626.1 mouse_genomes_project 10 94026578 94026634 + Mir7688 miRNA miRNA MGP_WSBEiJ_T0025579.1 MGP_WSBEiJ_G0016895.1 mouse_genomes_project 10 80467705 80488666 - MGP_WSBEiJ_P0025579 Atp8b3 protein_coding protein_coding MGP_WSBEiJ_T0026586.1 MGP_WSBEiJ_G0017186.1 mouse_genomes_project 10 129385029 129389749 + MGP_WSBEiJ_P0026586 Cyp27b1 protein_coding protein_coding MGP_WSBEiJ_T0026587.1 MGP_WSBEiJ_G0017186.1 mouse_genomes_project 10 129385029 129389786 + MGP_WSBEiJ_P0026587 Cyp27b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026588.1 MGP_WSBEiJ_G0017186.1 mouse_genomes_project 10 129385450 129386646 + Cyp27b1 protein_coding processed_transcript MGP_WSBEiJ_T0097643.1 MGP_WSBEiJ_G0036306.1 mouse_genomes_project 10 79571748 79571855 - Gm25794 snRNA snRNA MGP_WSBEiJ_T0000800.1 MGP_WSBEiJ_G0000739.1 mouse_genomes_project 10 111448936 111449228 - TEC TEC MGP_WSBEiJ_T0026816.1 MGP_WSBEiJ_G0017263.1 mouse_genomes_project 10 131246620 131267360 + MGP_WSBEiJ_P0026816 Pym1 protein_coding protein_coding MGP_WSBEiJ_T0026817.1 MGP_WSBEiJ_G0017263.1 mouse_genomes_project 10 131247196 131267360 + MGP_WSBEiJ_P0026817 Pym1 protein_coding protein_coding MGP_WSBEiJ_T0024740.1 MGP_WSBEiJ_G0016696.1 mouse_genomes_project 10 61371327 61406411 - MGP_WSBEiJ_P0024740 Srgn protein_coding protein_coding MGP_WSBEiJ_T0024741.1 MGP_WSBEiJ_G0016696.1 mouse_genomes_project 10 61371922 61386773 - MGP_WSBEiJ_P0024741 Srgn protein_coding protein_coding MGP_WSBEiJ_T0024742.1 MGP_WSBEiJ_G0016696.1 mouse_genomes_project 10 61372178 61386956 - MGP_WSBEiJ_P0024742 Srgn protein_coding protein_coding MGP_WSBEiJ_T0024743.1 MGP_WSBEiJ_G0016696.1 mouse_genomes_project 10 61376947 61406385 - MGP_WSBEiJ_P0024743 Srgn protein_coding protein_coding MGP_WSBEiJ_T0024744.1 MGP_WSBEiJ_G0016696.1 mouse_genomes_project 10 61386693 61387115 - MGP_WSBEiJ_P0024744 Srgn protein_coding protein_coding MGP_WSBEiJ_T0024745.1 MGP_WSBEiJ_G0016696.1 mouse_genomes_project 10 61386759 61406385 - Srgn protein_coding processed_transcript MGP_WSBEiJ_T0003028.1 MGP_WSBEiJ_G0002825.1 mouse_genomes_project 10 121768313 121784047 - Grip1os2 antisense antisense MGP_WSBEiJ_T0009466.1 MGP_WSBEiJ_G0007623.1 mouse_genomes_project 10 92610250 92610350 - Mir135a-2 miRNA miRNA MGP_WSBEiJ_T0025309.1 MGP_WSBEiJ_G0016833.1 mouse_genomes_project 10 79324778 79344186 + MGP_WSBEiJ_P0025309 Vmn2r83 protein_coding protein_coding MGP_WSBEiJ_T0097630.1 MGP_WSBEiJ_G0036293.1 mouse_genomes_project 10 45441372 45441534 - Gm25650 snRNA snRNA MGP_WSBEiJ_T0024292.1 MGP_WSBEiJ_G0016558.1 mouse_genomes_project 10 38239006 38260817 - MGP_WSBEiJ_P0024292 Mfsd4b3 protein_coding protein_coding MGP_WSBEiJ_T0098848.1 MGP_WSBEiJ_G0037511.1 mouse_genomes_project 10 38583343 38583556 + Rnu3a snoRNA snoRNA MGP_WSBEiJ_T0097259.1 MGP_WSBEiJ_G0035939.1 mouse_genomes_project 10 72964062 72997011 + Gm15397 sense_intronic sense_intronic MGP_WSBEiJ_T0023721.1 MGP_WSBEiJ_G0016383.1 mouse_genomes_project 10 1425813 1450737 + MGP_WSBEiJ_P0023721 Armt1 protein_coding protein_coding MGP_WSBEiJ_T0023722.1 MGP_WSBEiJ_G0016383.1 mouse_genomes_project 10 1425813 1450738 + MGP_WSBEiJ_P0023722 Armt1 protein_coding protein_coding MGP_WSBEiJ_T0023723.1 MGP_WSBEiJ_G0016383.1 mouse_genomes_project 10 1425898 1434488 + MGP_WSBEiJ_P0023723 Armt1 protein_coding protein_coding MGP_WSBEiJ_T0023724.1 MGP_WSBEiJ_G0016383.1 mouse_genomes_project 10 1425905 1446013 + Armt1 protein_coding processed_transcript MGP_WSBEiJ_T0023725.1 MGP_WSBEiJ_G0016383.1 mouse_genomes_project 10 1425913 1429689 + Armt1 protein_coding retained_intron MGP_WSBEiJ_T0023726.1 MGP_WSBEiJ_G0016383.1 mouse_genomes_project 10 1425918 1449555 + MGP_WSBEiJ_P0023726 Armt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023727.1 MGP_WSBEiJ_G0016383.1 mouse_genomes_project 10 1429095 1434984 + Armt1 protein_coding processed_transcript MGP_WSBEiJ_T0026445.1 MGP_WSBEiJ_G0017145.1 mouse_genomes_project 10 119194702 119228064 - MGP_WSBEiJ_P0026445 Cpsf6 protein_coding protein_coding MGP_WSBEiJ_T0026446.1 MGP_WSBEiJ_G0017145.1 mouse_genomes_project 10 119199069 119228067 - MGP_WSBEiJ_P0026446 Cpsf6 protein_coding protein_coding MGP_WSBEiJ_T0026447.1 MGP_WSBEiJ_G0017145.1 mouse_genomes_project 10 119199072 119228023 - MGP_WSBEiJ_P0026447 Cpsf6 protein_coding protein_coding MGP_WSBEiJ_T0026448.1 MGP_WSBEiJ_G0017145.1 mouse_genomes_project 10 119199404 119212299 - MGP_WSBEiJ_P0026448 Cpsf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026449.1 MGP_WSBEiJ_G0017145.1 mouse_genomes_project 10 119203809 119228022 - MGP_WSBEiJ_P0026449 Cpsf6 protein_coding protein_coding MGP_WSBEiJ_T0026450.1 MGP_WSBEiJ_G0017145.1 mouse_genomes_project 10 119205529 119206060 - MGP_WSBEiJ_P0026450 Cpsf6 protein_coding protein_coding MGP_WSBEiJ_T0026451.1 MGP_WSBEiJ_G0017145.1 mouse_genomes_project 10 119210270 119214587 - Cpsf6 protein_coding retained_intron MGP_WSBEiJ_T0026452.1 MGP_WSBEiJ_G0017145.1 mouse_genomes_project 10 119217418 119231092 - MGP_WSBEiJ_P0026452 Cpsf6 protein_coding protein_coding MGP_WSBEiJ_T0025635.1 MGP_WSBEiJ_G0016918.1 mouse_genomes_project 10 80884259 80902122 - MGP_WSBEiJ_P0025635 Lmnb2 protein_coding protein_coding MGP_WSBEiJ_T0025636.1 MGP_WSBEiJ_G0016918.1 mouse_genomes_project 10 80885699 80889310 - MGP_WSBEiJ_P0025636 Lmnb2 protein_coding protein_coding MGP_WSBEiJ_T0025637.1 MGP_WSBEiJ_G0016918.1 mouse_genomes_project 10 80892551 80901755 - Lmnb2 protein_coding processed_transcript MGP_WSBEiJ_T0012192.1 MGP_WSBEiJ_G0010322.1 mouse_genomes_project 10 103532375 103533320 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025410.1 MGP_WSBEiJ_G0016860.1 mouse_genomes_project 10 79792692 79792977 + MGP_WSBEiJ_P0025410 Gm26602 protein_coding protein_coding MGP_WSBEiJ_T0012202.1 MGP_WSBEiJ_G0010332.1 mouse_genomes_project 10 132735899 132736870 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025645.1 MGP_WSBEiJ_G0016921.1 mouse_genomes_project 10 81008739 81014551 - MGP_WSBEiJ_P0025645 Diras1 protein_coding protein_coding MGP_WSBEiJ_T0025646.1 MGP_WSBEiJ_G0016921.1 mouse_genomes_project 10 81011239 81014804 - MGP_WSBEiJ_P0025646 Diras1 protein_coding protein_coding MGP_WSBEiJ_T0025192.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77266788 77285701 + MGP_WSBEiJ_P0025192 Pttg1ip protein_coding protein_coding MGP_WSBEiJ_T0025193.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77266824 77274291 + Pttg1ip protein_coding retained_intron MGP_WSBEiJ_T0025194.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77266826 77280758 + MGP_WSBEiJ_P0025194 Pttg1ip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025195.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77266871 77284299 + MGP_WSBEiJ_P0025195 Pttg1ip protein_coding protein_coding MGP_WSBEiJ_T0025196.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77266890 77279770 + MGP_WSBEiJ_P0025196 Pttg1ip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025197.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77267475 77284233 + MGP_WSBEiJ_P0025197 Pttg1ip protein_coding protein_coding MGP_WSBEiJ_T0025198.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77269007 77279858 + MGP_WSBEiJ_P0025198 Pttg1ip protein_coding protein_coding MGP_WSBEiJ_T0025199.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77276254 77284196 + Pttg1ip protein_coding retained_intron MGP_WSBEiJ_T0025200.1 MGP_WSBEiJ_G0016793.1 mouse_genomes_project 10 77279198 77284094 + Pttg1ip protein_coding retained_intron MGP_WSBEiJ_T0023957.1 MGP_WSBEiJ_G0016434.1 mouse_genomes_project 10 11952773 12020655 + MGP_WSBEiJ_P0023957 Nmbr protein_coding protein_coding MGP_WSBEiJ_T0023958.1 MGP_WSBEiJ_G0016434.1 mouse_genomes_project 10 11952779 12005187 + Nmbr protein_coding processed_transcript MGP_WSBEiJ_T0023959.1 MGP_WSBEiJ_G0016434.1 mouse_genomes_project 10 11952791 12012902 + Nmbr protein_coding processed_transcript MGP_WSBEiJ_T0023960.1 MGP_WSBEiJ_G0016434.1 mouse_genomes_project 10 11952803 12021176 + MGP_WSBEiJ_P0023960 Nmbr protein_coding protein_coding MGP_WSBEiJ_T0023961.1 MGP_WSBEiJ_G0016434.1 mouse_genomes_project 10 11952809 11971566 + Nmbr protein_coding retained_intron MGP_WSBEiJ_T0023963.1 MGP_WSBEiJ_G0016434.1 mouse_genomes_project 10 12014040 12024690 + MGP_WSBEiJ_P0023963 Nmbr protein_coding protein_coding MGP_WSBEiJ_T0023964.1 MGP_WSBEiJ_G0016434.1 mouse_genomes_project 10 12014102 12024423 + MGP_WSBEiJ_P0023964 Nmbr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023965.1 MGP_WSBEiJ_G0016434.1 mouse_genomes_project 10 12014102 12024423 + MGP_WSBEiJ_P0023965 Nmbr protein_coding protein_coding MGP_WSBEiJ_T0025846.1 MGP_WSBEiJ_G0016965.1 mouse_genomes_project 10 82308058 82325091 - MGP_WSBEiJ_P0025846 Zfp938 protein_coding protein_coding MGP_WSBEiJ_T0025847.1 MGP_WSBEiJ_G0016965.1 mouse_genomes_project 10 82308062 82325098 - MGP_WSBEiJ_P0025847 Zfp938 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024489.1 MGP_WSBEiJ_G0016627.1 mouse_genomes_project 10 52123741 52133308 + MGP_WSBEiJ_P0024489 Pln protein_coding protein_coding MGP_WSBEiJ_T0024490.1 MGP_WSBEiJ_G0016627.1 mouse_genomes_project 10 52123741 52133308 + MGP_WSBEiJ_P0024490 Pln protein_coding protein_coding MGP_WSBEiJ_T0097627.1 MGP_WSBEiJ_G0036290.1 mouse_genomes_project 10 43288301 43288416 + Gm22503 snRNA snRNA MGP_WSBEiJ_T0026753.1 MGP_WSBEiJ_G0017237.1 mouse_genomes_project 10 130725885 130728040 + MGP_WSBEiJ_P0026753 Apof protein_coding protein_coding MGP_WSBEiJ_T0024103.1 MGP_WSBEiJ_G0016486.1 mouse_genomes_project 10 21609377 21623415 + MGP_WSBEiJ_P0024103 protein_coding protein_coding MGP_WSBEiJ_T0025927.1 MGP_WSBEiJ_G0016991.1 mouse_genomes_project 10 85611206 85885119 + MGP_WSBEiJ_P0025927 Btbd11 protein_coding protein_coding MGP_WSBEiJ_T0025928.1 MGP_WSBEiJ_G0016991.1 mouse_genomes_project 10 85611219 85865355 + MGP_WSBEiJ_P0025928 Btbd11 protein_coding protein_coding MGP_WSBEiJ_T0025929.1 MGP_WSBEiJ_G0016991.1 mouse_genomes_project 10 85822421 85885119 + MGP_WSBEiJ_P0025929 Btbd11 protein_coding protein_coding MGP_WSBEiJ_T0025930.1 MGP_WSBEiJ_G0016991.1 mouse_genomes_project 10 85822431 85830061 + Btbd11 protein_coding processed_transcript MGP_WSBEiJ_T0025931.1 MGP_WSBEiJ_G0016991.1 mouse_genomes_project 10 85854305 85866394 + Btbd11 protein_coding retained_intron MGP_WSBEiJ_T0025932.1 MGP_WSBEiJ_G0016991.1 mouse_genomes_project 10 85864333 85885116 + Btbd11 protein_coding processed_transcript MGP_WSBEiJ_T0025933.1 MGP_WSBEiJ_G0016991.1 mouse_genomes_project 10 85870007 85885119 + Btbd11 protein_coding retained_intron MGP_WSBEiJ_T0025934.1 MGP_WSBEiJ_G0016991.1 mouse_genomes_project 10 85878969 85883087 + Btbd11 protein_coding retained_intron MGP_WSBEiJ_T0009479.1 MGP_WSBEiJ_G0007636.1 mouse_genomes_project 10 110696000 110696068 - Gm44495 miRNA miRNA MGP_WSBEiJ_T0026161.1 MGP_WSBEiJ_G0017041.1 mouse_genomes_project 10 94125474 94142785 - MGP_WSBEiJ_P0026161 Amdhd1 protein_coding protein_coding MGP_WSBEiJ_T0025524.1 MGP_WSBEiJ_G0016884.1 mouse_genomes_project 10 80218933 80241138 + MGP_WSBEiJ_P0025524 Apc2 protein_coding protein_coding MGP_WSBEiJ_T0025525.1 MGP_WSBEiJ_G0016884.1 mouse_genomes_project 10 80222019 80225316 + MGP_WSBEiJ_P0025525 Apc2 protein_coding protein_coding MGP_WSBEiJ_T0025526.1 MGP_WSBEiJ_G0016884.1 mouse_genomes_project 10 80223785 80226286 + Apc2 protein_coding retained_intron MGP_WSBEiJ_T0025527.1 MGP_WSBEiJ_G0016884.1 mouse_genomes_project 10 80223972 80225302 + MGP_WSBEiJ_P0025527 Apc2 protein_coding protein_coding MGP_WSBEiJ_T0025528.1 MGP_WSBEiJ_G0016884.1 mouse_genomes_project 10 80223973 80225361 + MGP_WSBEiJ_P0025528 Apc2 protein_coding protein_coding MGP_WSBEiJ_T0025529.1 MGP_WSBEiJ_G0016884.1 mouse_genomes_project 10 80224772 80241131 + MGP_WSBEiJ_P0025529 Apc2 protein_coding protein_coding MGP_WSBEiJ_T0009423.1 MGP_WSBEiJ_G0007580.1 mouse_genomes_project 10 20328336 20328397 - Mir7663 miRNA miRNA MGP_WSBEiJ_T0026051.1 MGP_WSBEiJ_G0017022.1 mouse_genomes_project 10 89273419 89330657 + MGP_WSBEiJ_P0026051 Slc5a8 protein_coding protein_coding MGP_WSBEiJ_T0026881.1 MGP_WSBEiJ_G0017303.1 mouse_genomes_project 10 132337906 132338903 - MGP_WSBEiJ_P0026881 Olfr807 protein_coding protein_coding MGP_WSBEiJ_T0024257.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380728 37395068 - MGP_WSBEiJ_P0024257 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024258.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380732 37395062 - MGP_WSBEiJ_P0024258 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024259.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380734 37395010 - MGP_WSBEiJ_P0024259 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024260.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380734 37385027 - MGP_WSBEiJ_P0024260 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024261.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380742 37395062 - MGP_WSBEiJ_P0024261 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024262.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380743 37395062 - MGP_WSBEiJ_P0024262 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024263.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380744 37384239 - MGP_WSBEiJ_P0024263 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024264.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380748 37395076 - MGP_WSBEiJ_P0024264 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024265.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37380792 37395062 - MGP_WSBEiJ_P0024265 Fam229b protein_coding protein_coding MGP_WSBEiJ_T0024266.1 MGP_WSBEiJ_G0016550.1 mouse_genomes_project 10 37381543 37395019 - Fam229b protein_coding retained_intron MGP_WSBEiJ_T0097652.1 MGP_WSBEiJ_G0036315.1 mouse_genomes_project 10 88482575 88482690 - Gm26357 snRNA snRNA MGP_WSBEiJ_T0026689.1 MGP_WSBEiJ_G0017216.1 mouse_genomes_project 10 130113772 130122584 + MGP_WSBEiJ_P0026689 Tac2 protein_coding protein_coding MGP_WSBEiJ_T0026690.1 MGP_WSBEiJ_G0017216.1 mouse_genomes_project 10 130114733 130122584 + MGP_WSBEiJ_P0026690 Tac2 protein_coding protein_coding MGP_WSBEiJ_T0026370.1 MGP_WSBEiJ_G0017112.1 mouse_genomes_project 10 113581746 113607034 + MGP_WSBEiJ_P0026370 Glipr1l1 protein_coding protein_coding MGP_WSBEiJ_T0098871.1 MGP_WSBEiJ_G0037534.1 mouse_genomes_project 10 104262702 104262835 + Gm25376 snoRNA snoRNA MGP_WSBEiJ_T0026562.1 MGP_WSBEiJ_G0017177.1 mouse_genomes_project 10 125422205 125918484 + MGP_WSBEiJ_P0026562 Fam19a2 protein_coding protein_coding MGP_WSBEiJ_T0016535.1 MGP_WSBEiJ_G0014558.1 mouse_genomes_project 10 122420146 122439156 + 1700006J14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016536.1 MGP_WSBEiJ_G0014558.1 mouse_genomes_project 10 122420147 122440646 + 1700006J14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016537.1 MGP_WSBEiJ_G0014558.1 mouse_genomes_project 10 122420159 122437068 + 1700006J14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016538.1 MGP_WSBEiJ_G0014558.1 mouse_genomes_project 10 122420199 122440137 + 1700006J14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0012170.1 MGP_WSBEiJ_G0010300.1 mouse_genomes_project 10 56491677 56492233 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003031.1 MGP_WSBEiJ_G0002827.1 mouse_genomes_project 10 122447556 122450775 + 9230105E05Rik antisense antisense MGP_WSBEiJ_T0024307.1 MGP_WSBEiJ_G0016565.1 mouse_genomes_project 10 38690775 38842677 + MGP_WSBEiJ_P0024307 Cdk19 protein_coding protein_coding MGP_WSBEiJ_T0024308.1 MGP_WSBEiJ_G0016565.1 mouse_genomes_project 10 38690775 38842677 + MGP_WSBEiJ_P0024308 Cdk19 protein_coding protein_coding MGP_WSBEiJ_T0024098.1 MGP_WSBEiJ_G0016481.1 mouse_genomes_project 10 21543324 21548233 + MGP_WSBEiJ_P0024098 Taar2 protein_coding protein_coding MGP_WSBEiJ_T0025141.1 MGP_WSBEiJ_G0016782.1 mouse_genomes_project 10 76227418 76255032 - MGP_WSBEiJ_P0025141 Col6a2 protein_coding protein_coding MGP_WSBEiJ_T0025142.1 MGP_WSBEiJ_G0016782.1 mouse_genomes_project 10 76229491 76254727 - MGP_WSBEiJ_P0025142 Col6a2 protein_coding protein_coding MGP_WSBEiJ_T0025143.1 MGP_WSBEiJ_G0016782.1 mouse_genomes_project 10 76232661 76254727 - Col6a2 protein_coding retained_intron MGP_WSBEiJ_T0024816.1 MGP_WSBEiJ_G0016714.1 mouse_genomes_project 10 62899162 62901731 - MGP_WSBEiJ_P0024816 Gm10118 protein_coding protein_coding MGP_WSBEiJ_T0025942.1 MGP_WSBEiJ_G0016994.1 mouse_genomes_project 10 86161368 86163382 + MGP_WSBEiJ_P0025942 Ascl4 protein_coding protein_coding MGP_WSBEiJ_T0025943.1 MGP_WSBEiJ_G0016994.1 mouse_genomes_project 10 86162461 86179759 + MGP_WSBEiJ_P0025943 Ascl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025634.1 MGP_WSBEiJ_G0016917.1 mouse_genomes_project 10 80882360 80883882 - MGP_WSBEiJ_P0025634 Timm13 protein_coding protein_coding MGP_WSBEiJ_T0026904.1 MGP_WSBEiJ_G0017320.1 mouse_genomes_project 10 132954546 132997408 + MGP_WSBEiJ_P0026904 Tespa1 protein_coding protein_coding MGP_WSBEiJ_T0026797.1 MGP_WSBEiJ_G0017254.1 mouse_genomes_project 10 131034848 131043019 - MGP_WSBEiJ_P0026797 Pa2g4 protein_coding protein_coding MGP_WSBEiJ_T0026798.1 MGP_WSBEiJ_G0017254.1 mouse_genomes_project 10 131036519 131042912 - MGP_WSBEiJ_P0026798 Pa2g4 protein_coding protein_coding MGP_WSBEiJ_T0026799.1 MGP_WSBEiJ_G0017254.1 mouse_genomes_project 10 131040236 131042954 - Pa2g4 protein_coding retained_intron MGP_WSBEiJ_T0098885.1 MGP_WSBEiJ_G0037548.1 mouse_genomes_project 10 130519820 130519892 + Mir677 snoRNA snoRNA MGP_WSBEiJ_T0002997.1 MGP_WSBEiJ_G0002805.1 mouse_genomes_project 10 82259019 82281896 + Gm15608 antisense antisense MGP_WSBEiJ_T0002998.1 MGP_WSBEiJ_G0002805.1 mouse_genomes_project 10 82265955 82281877 + Gm15608 antisense antisense MGP_WSBEiJ_T0011077.1 MGP_WSBEiJ_G0009234.1 mouse_genomes_project 10 61851577 61851860 + Gm22803 misc_RNA misc_RNA MGP_WSBEiJ_T0006052.1 MGP_WSBEiJ_G0005054.1 mouse_genomes_project 10 94509716 94514454 + 4930471D02Rik lincRNA lincRNA MGP_WSBEiJ_T0025418.1 MGP_WSBEiJ_G0016864.1 mouse_genomes_project 10 79856498 79862991 + MGP_WSBEiJ_P0025418 Grin3b protein_coding protein_coding MGP_WSBEiJ_T0025419.1 MGP_WSBEiJ_G0016864.1 mouse_genomes_project 10 79859537 79862516 + MGP_WSBEiJ_P0025419 Grin3b protein_coding protein_coding MGP_WSBEiJ_T0025420.1 MGP_WSBEiJ_G0016864.1 mouse_genomes_project 10 79860209 79862925 + MGP_WSBEiJ_P0025420 Grin3b protein_coding protein_coding MGP_WSBEiJ_T0006029.1 MGP_WSBEiJ_G0005044.1 mouse_genomes_project 10 84664927 84674102 + 4930463O16Rik lincRNA lincRNA MGP_WSBEiJ_T0006030.1 MGP_WSBEiJ_G0005044.1 mouse_genomes_project 10 84665368 84669380 + 4930463O16Rik lincRNA lincRNA MGP_WSBEiJ_T0026078.1 MGP_WSBEiJ_G0017029.1 mouse_genomes_project 10 90203583 90278917 + MGP_WSBEiJ_P0026078 Uhrf1bp1l protein_coding protein_coding MGP_WSBEiJ_T0024104.1 MGP_WSBEiJ_G0016487.1 mouse_genomes_project 10 21609433 21610510 + MGP_WSBEiJ_P0024104 protein_coding protein_coding MGP_WSBEiJ_T0000791.1 MGP_WSBEiJ_G0000731.1 mouse_genomes_project 10 78390200 78392948 - TEC TEC MGP_WSBEiJ_T0026568.1 MGP_WSBEiJ_G0017181.1 mouse_genomes_project 10 129309569 129327671 + MGP_WSBEiJ_P0026568 Ctdsp2 protein_coding protein_coding MGP_WSBEiJ_T0026633.1 MGP_WSBEiJ_G0017204.1 mouse_genomes_project 10 129710180 129712533 - MGP_WSBEiJ_P0026633 Inhbe protein_coding protein_coding MGP_WSBEiJ_T0009443.1 MGP_WSBEiJ_G0007600.1 mouse_genomes_project 10 75595010 75595102 + Mir6409 miRNA miRNA MGP_WSBEiJ_T0023708.1 MGP_WSBEiJ_G0016380.1 mouse_genomes_project 10 1226726 1349789 + MGP_WSBEiJ_P0023708 Akap12 protein_coding protein_coding MGP_WSBEiJ_T0026218.1 MGP_WSBEiJ_G0017055.1 mouse_genomes_project 10 95445465 95602723 - MGP_WSBEiJ_P0026218 Plxnc1 protein_coding protein_coding MGP_WSBEiJ_T0026219.1 MGP_WSBEiJ_G0017055.1 mouse_genomes_project 10 95492779 95500663 - Plxnc1 protein_coding retained_intron MGP_WSBEiJ_T0026220.1 MGP_WSBEiJ_G0017055.1 mouse_genomes_project 10 95511264 95527687 - MGP_WSBEiJ_P0026220 Plxnc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026221.1 MGP_WSBEiJ_G0017055.1 mouse_genomes_project 10 95527468 95580055 - Plxnc1 protein_coding retained_intron MGP_WSBEiJ_T0026863.1 MGP_WSBEiJ_G0017290.1 mouse_genomes_project 10 132007862 132018198 + MGP_WSBEiJ_P0026863 Olfr786 protein_coding protein_coding MGP_WSBEiJ_T0026864.1 MGP_WSBEiJ_G0017290.1 mouse_genomes_project 10 132017259 132018198 + MGP_WSBEiJ_P0026864 Olfr786 protein_coding protein_coding MGP_WSBEiJ_T0026855.1 MGP_WSBEiJ_G0017285.1 mouse_genomes_project 10 131924625 131929481 + MGP_WSBEiJ_P0026855 Olfr781 protein_coding protein_coding MGP_WSBEiJ_T0026856.1 MGP_WSBEiJ_G0017285.1 mouse_genomes_project 10 131928545 131929481 + MGP_WSBEiJ_P0026856 Olfr781 protein_coding protein_coding MGP_WSBEiJ_T0025359.1 MGP_WSBEiJ_G0016848.1 mouse_genomes_project 10 79626811 79635239 - MGP_WSBEiJ_P0025359 Rnf126 protein_coding protein_coding MGP_WSBEiJ_T0024312.1 MGP_WSBEiJ_G0016568.1 mouse_genomes_project 10 39073185 39203643 + MGP_WSBEiJ_P0024312 Mettl24 protein_coding protein_coding MGP_WSBEiJ_T0009440.1 MGP_WSBEiJ_G0007597.1 mouse_genomes_project 10 60590779 60590864 + Mir5108 miRNA miRNA MGP_WSBEiJ_T0012197.1 MGP_WSBEiJ_G0010327.1 mouse_genomes_project 10 120847519 120848427 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024533.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56848334 56862709 + MGP_WSBEiJ_P0024533 Gcc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024534.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56848356 56902790 + MGP_WSBEiJ_P0024534 Gcc2 protein_coding protein_coding MGP_WSBEiJ_T0024535.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56848392 56903148 + MGP_WSBEiJ_P0024535 Gcc2 protein_coding protein_coding MGP_WSBEiJ_T0024536.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56848539 56862581 + MGP_WSBEiJ_P0024536 Gcc2 protein_coding protein_coding MGP_WSBEiJ_T0024537.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56848717 56861292 + Gcc2 protein_coding processed_transcript MGP_WSBEiJ_T0024538.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56866691 56869541 + Gcc2 protein_coding retained_intron MGP_WSBEiJ_T0024539.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56868202 56875086 + MGP_WSBEiJ_P0024539 Gcc2 protein_coding protein_coding MGP_WSBEiJ_T0024540.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56881624 56890460 + Gcc2 protein_coding retained_intron MGP_WSBEiJ_T0024541.1 MGP_WSBEiJ_G0016641.1 mouse_genomes_project 10 56896085 56903137 + Gcc2 protein_coding retained_intron MGP_WSBEiJ_T0024006.1 MGP_WSBEiJ_G0016450.1 mouse_genomes_project 10 17016369 17034834 + MGP_WSBEiJ_P0024006 Ifngr1 protein_coding protein_coding MGP_WSBEiJ_T0024007.1 MGP_WSBEiJ_G0016450.1 mouse_genomes_project 10 17016378 17022281 + Ifngr1 protein_coding retained_intron MGP_WSBEiJ_T0024008.1 MGP_WSBEiJ_G0016450.1 mouse_genomes_project 10 17016451 17028109 + MGP_WSBEiJ_P0024008 Ifngr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024009.1 MGP_WSBEiJ_G0016450.1 mouse_genomes_project 10 17016468 17025853 + MGP_WSBEiJ_P0024009 Ifngr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024010.1 MGP_WSBEiJ_G0016450.1 mouse_genomes_project 10 17016477 17028129 + MGP_WSBEiJ_P0024010 Ifngr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024011.1 MGP_WSBEiJ_G0016450.1 mouse_genomes_project 10 17030434 17033859 + Ifngr1 protein_coding retained_intron MGP_WSBEiJ_T0011072.1 MGP_WSBEiJ_G0009229.1 mouse_genomes_project 10 22981764 22982017 - Gm26167 misc_RNA misc_RNA MGP_WSBEiJ_T0024528.1 MGP_WSBEiJ_G0016639.1 mouse_genomes_project 10 56672829 56676399 + MGP_WSBEiJ_P0024528 Fabp7 protein_coding protein_coding MGP_WSBEiJ_T0024529.1 MGP_WSBEiJ_G0016639.1 mouse_genomes_project 10 56672871 56674761 + MGP_WSBEiJ_P0024529 Fabp7 protein_coding protein_coding MGP_WSBEiJ_T0025611.1 MGP_WSBEiJ_G0016907.1 mouse_genomes_project 10 80728106 80769141 + MGP_WSBEiJ_P0025611 Dot1l protein_coding protein_coding MGP_WSBEiJ_T0025612.1 MGP_WSBEiJ_G0016907.1 mouse_genomes_project 10 80728108 80768067 + MGP_WSBEiJ_P0025612 Dot1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025613.1 MGP_WSBEiJ_G0016907.1 mouse_genomes_project 10 80728363 80739484 + Dot1l protein_coding retained_intron MGP_WSBEiJ_T0025614.1 MGP_WSBEiJ_G0016907.1 mouse_genomes_project 10 80751264 80768071 + MGP_WSBEiJ_P0025614 Dot1l protein_coding protein_coding MGP_WSBEiJ_T0025615.1 MGP_WSBEiJ_G0016907.1 mouse_genomes_project 10 80758867 80760125 + Dot1l protein_coding retained_intron MGP_WSBEiJ_T0025616.1 MGP_WSBEiJ_G0016907.1 mouse_genomes_project 10 80762742 80768027 + MGP_WSBEiJ_P0025616 Dot1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025617.1 MGP_WSBEiJ_G0016907.1 mouse_genomes_project 10 80765132 80767498 + MGP_WSBEiJ_P0025617 Dot1l protein_coding protein_coding MGP_WSBEiJ_T0025739.1 MGP_WSBEiJ_G0016945.1 mouse_genomes_project 10 81386065 81387886 - MGP_WSBEiJ_P0025739 4930404N11Rik protein_coding protein_coding MGP_WSBEiJ_T0025740.1 MGP_WSBEiJ_G0016945.1 mouse_genomes_project 10 81386921 81387908 - 4930404N11Rik protein_coding retained_intron MGP_WSBEiJ_T0025741.1 MGP_WSBEiJ_G0016945.1 mouse_genomes_project 10 81387022 81388848 - MGP_WSBEiJ_P0025741 4930404N11Rik protein_coding protein_coding MGP_WSBEiJ_T0025742.1 MGP_WSBEiJ_G0016945.1 mouse_genomes_project 10 81387045 81388822 - 4930404N11Rik protein_coding retained_intron MGP_WSBEiJ_T0009477.1 MGP_WSBEiJ_G0007634.1 mouse_genomes_project 10 108736727 108736856 + Gm44403 miRNA miRNA MGP_WSBEiJ_T0026801.1 MGP_WSBEiJ_G0017256.1 mouse_genomes_project 10 131110780 131112758 - MGP_WSBEiJ_P0026801 Rps26 protein_coding protein_coding MGP_WSBEiJ_T0025283.1 MGP_WSBEiJ_G0016815.1 mouse_genomes_project 10 78206896 78208847 + MGP_WSBEiJ_P0025283 Cstb protein_coding protein_coding MGP_WSBEiJ_T0024096.1 MGP_WSBEiJ_G0016479.1 mouse_genomes_project 10 21497825 21509086 + MGP_WSBEiJ_P0024096 Vnn1 protein_coding protein_coding MGP_WSBEiJ_T0025308.1 MGP_WSBEiJ_G0016832.1 mouse_genomes_project 10 78982111 79025845 + MGP_WSBEiJ_P0025308 protein_coding protein_coding MGP_WSBEiJ_T0025588.1 MGP_WSBEiJ_G0016897.1 mouse_genomes_project 10 80520716 80530906 - MGP_WSBEiJ_P0025588 Klf16 protein_coding protein_coding MGP_WSBEiJ_T0026352.1 MGP_WSBEiJ_G0017105.1 mouse_genomes_project 10 112347680 112416317 - MGP_WSBEiJ_P0026352 Zdhhc17 protein_coding protein_coding MGP_WSBEiJ_T0026353.1 MGP_WSBEiJ_G0017105.1 mouse_genomes_project 10 112369783 112416254 - MGP_WSBEiJ_P0026353 Zdhhc17 protein_coding protein_coding MGP_WSBEiJ_T0025506.1 MGP_WSBEiJ_G0016880.1 mouse_genomes_project 10 80166103 80173768 + MGP_WSBEiJ_P0025506 Ndufs7 protein_coding protein_coding MGP_WSBEiJ_T0025507.1 MGP_WSBEiJ_G0016880.1 mouse_genomes_project 10 80166431 80170396 + Ndufs7 protein_coding retained_intron MGP_WSBEiJ_T0025508.1 MGP_WSBEiJ_G0016880.1 mouse_genomes_project 10 80166434 80173767 + MGP_WSBEiJ_P0025508 Ndufs7 protein_coding protein_coding MGP_WSBEiJ_T0025509.1 MGP_WSBEiJ_G0016880.1 mouse_genomes_project 10 80166442 80170916 + Ndufs7 protein_coding retained_intron MGP_WSBEiJ_T0025510.1 MGP_WSBEiJ_G0016880.1 mouse_genomes_project 10 80166467 80173769 + Ndufs7 protein_coding processed_transcript MGP_WSBEiJ_T0025511.1 MGP_WSBEiJ_G0016880.1 mouse_genomes_project 10 80170297 80172115 + Ndufs7 protein_coding retained_intron MGP_WSBEiJ_T0024513.1 MGP_WSBEiJ_G0016637.1 mouse_genomes_project 10 56397841 56415281 - MGP_WSBEiJ_P0024513 Serinc1 protein_coding protein_coding MGP_WSBEiJ_T0024514.1 MGP_WSBEiJ_G0016637.1 mouse_genomes_project 10 56405135 56415179 - MGP_WSBEiJ_P0024514 Serinc1 protein_coding protein_coding MGP_WSBEiJ_T0024515.1 MGP_WSBEiJ_G0016637.1 mouse_genomes_project 10 56405284 56415161 - MGP_WSBEiJ_P0024515 Serinc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024516.1 MGP_WSBEiJ_G0016637.1 mouse_genomes_project 10 56407986 56415228 - Serinc1 protein_coding retained_intron MGP_WSBEiJ_T0024517.1 MGP_WSBEiJ_G0016637.1 mouse_genomes_project 10 56407992 56415160 - Serinc1 protein_coding retained_intron MGP_WSBEiJ_T0026256.1 MGP_WSBEiJ_G0017076.1 mouse_genomes_project 10 100332321 100335602 + MGP_WSBEiJ_P0026256 Gad1-ps protein_coding protein_coding MGP_WSBEiJ_T0003034.1 MGP_WSBEiJ_G0002830.1 mouse_genomes_project 10 129976434 129977765 + Gm16217 antisense antisense MGP_WSBEiJ_T0024707.1 MGP_WSBEiJ_G0016690.1 mouse_genomes_project 10 61111991 61128564 + MGP_WSBEiJ_P0024707 Tacr2 protein_coding protein_coding MGP_WSBEiJ_T0024482.1 MGP_WSBEiJ_G0016622.1 mouse_genomes_project 10 51107861 51107948 + MGP_WSBEiJ_P0024482 Gm26741 protein_coding protein_coding MGP_WSBEiJ_T0012182.1 MGP_WSBEiJ_G0010312.1 mouse_genomes_project 10 75522101 75522494 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024110.1 MGP_WSBEiJ_G0016493.1 mouse_genomes_project 10 21856972 21941094 + MGP_WSBEiJ_P0024110 Moxd1 protein_coding protein_coding MGP_WSBEiJ_T0024111.1 MGP_WSBEiJ_G0016493.1 mouse_genomes_project 10 21857000 21865817 + Moxd1 protein_coding processed_transcript MGP_WSBEiJ_T0024317.1 MGP_WSBEiJ_G0016572.1 mouse_genomes_project 10 39599261 39717708 - MGP_WSBEiJ_P0024317 Fig4 protein_coding protein_coding MGP_WSBEiJ_T0024107.1 MGP_WSBEiJ_G0016490.1 mouse_genomes_project 10 21663166 21664820 + MGP_WSBEiJ_P0024107 protein_coding protein_coding MGP_WSBEiJ_T0026711.1 MGP_WSBEiJ_G0017227.1 mouse_genomes_project 10 130468887 130482133 + MGP_WSBEiJ_P0026711 Naca protein_coding protein_coding MGP_WSBEiJ_T0026712.1 MGP_WSBEiJ_G0017227.1 mouse_genomes_project 10 130468887 130482133 + MGP_WSBEiJ_P0026712 Naca protein_coding protein_coding MGP_WSBEiJ_T0012203.1 MGP_WSBEiJ_G0010333.1 mouse_genomes_project 10 132768196 132776287 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000785.1 MGP_WSBEiJ_G0000725.1 mouse_genomes_project 10 25393302 25395062 - TEC TEC MGP_WSBEiJ_T0026315.1 MGP_WSBEiJ_G0017092.1 mouse_genomes_project 10 107666135 108164160 + MGP_WSBEiJ_P0026315 Ppfia2 protein_coding protein_coding MGP_WSBEiJ_T0026316.1 MGP_WSBEiJ_G0017092.1 mouse_genomes_project 10 107666171 107997679 + MGP_WSBEiJ_P0026316 Ppfia2 protein_coding protein_coding MGP_WSBEiJ_T0024879.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748073 69107702 + protein_coding retained_intron MGP_WSBEiJ_T0024880.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748073 68945689 + protein_coding processed_transcript MGP_WSBEiJ_T0024881.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748073 69275340 + MGP_WSBEiJ_P0024881 protein_coding protein_coding MGP_WSBEiJ_T0024882.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748116 69084697 + protein_coding retained_intron MGP_WSBEiJ_T0024883.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748144 69272535 + MGP_WSBEiJ_P0024883 protein_coding protein_coding MGP_WSBEiJ_T0024884.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748148 69272789 + MGP_WSBEiJ_P0024884 protein_coding protein_coding MGP_WSBEiJ_T0024885.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748148 69272789 + MGP_WSBEiJ_P0024885 protein_coding protein_coding MGP_WSBEiJ_T0024886.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748366 69055773 + MGP_WSBEiJ_P0024886 protein_coding protein_coding MGP_WSBEiJ_T0024887.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748509 69271779 + MGP_WSBEiJ_P0024887 protein_coding protein_coding MGP_WSBEiJ_T0024888.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748523 69263461 + MGP_WSBEiJ_P0024888 protein_coding protein_coding MGP_WSBEiJ_T0024889.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748523 69263461 + MGP_WSBEiJ_P0024889 protein_coding protein_coding MGP_WSBEiJ_T0024890.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748523 69263461 + MGP_WSBEiJ_P0024890 protein_coding protein_coding MGP_WSBEiJ_T0024891.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748523 69263461 + MGP_WSBEiJ_P0024891 protein_coding protein_coding MGP_WSBEiJ_T0024892.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68748523 69263461 + MGP_WSBEiJ_P0024892 protein_coding protein_coding MGP_WSBEiJ_T0024893.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68930966 68935149 + protein_coding retained_intron MGP_WSBEiJ_T0024894.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68931042 69263459 + MGP_WSBEiJ_P0024894 protein_coding protein_coding MGP_WSBEiJ_T0024895.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68931146 69242204 + protein_coding retained_intron MGP_WSBEiJ_T0024896.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 68931150 69053327 + protein_coding retained_intron MGP_WSBEiJ_T0024897.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69015093 69041131 + protein_coding retained_intron MGP_WSBEiJ_T0024898.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69015104 69093619 + MGP_WSBEiJ_P0024898 protein_coding protein_coding MGP_WSBEiJ_T0024899.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69017038 69084118 + MGP_WSBEiJ_P0024899 protein_coding protein_coding MGP_WSBEiJ_T0024900.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69135926 69271834 + MGP_WSBEiJ_P0024900 protein_coding protein_coding MGP_WSBEiJ_T0024901.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69136866 69220313 + MGP_WSBEiJ_P0024901 protein_coding protein_coding MGP_WSBEiJ_T0024902.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69156591 69198016 + protein_coding retained_intron MGP_WSBEiJ_T0024903.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168427 69169257 + protein_coding retained_intron MGP_WSBEiJ_T0024904.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168427 69271870 + MGP_WSBEiJ_P0024904 protein_coding protein_coding MGP_WSBEiJ_T0024905.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168464 69272861 + MGP_WSBEiJ_P0024905 protein_coding protein_coding MGP_WSBEiJ_T0024906.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168705 69272789 + MGP_WSBEiJ_P0024906 protein_coding protein_coding MGP_WSBEiJ_T0024907.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168705 69272789 + MGP_WSBEiJ_P0024907 protein_coding protein_coding MGP_WSBEiJ_T0024908.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168705 69272789 + MGP_WSBEiJ_P0024908 protein_coding protein_coding MGP_WSBEiJ_T0024909.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168737 69263633 + MGP_WSBEiJ_P0024909 protein_coding protein_coding MGP_WSBEiJ_T0024910.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168751 69241474 + protein_coding retained_intron MGP_WSBEiJ_T0024911.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69168888 69272550 + MGP_WSBEiJ_P0024911 protein_coding protein_coding MGP_WSBEiJ_T0024912.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69169014 69272535 + MGP_WSBEiJ_P0024912 protein_coding protein_coding MGP_WSBEiJ_T0024913.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69169051 69271908 + MGP_WSBEiJ_P0024913 protein_coding protein_coding MGP_WSBEiJ_T0024914.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69220224 69229209 + protein_coding retained_intron MGP_WSBEiJ_T0024915.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69225384 69246487 + MGP_WSBEiJ_P0024915 protein_coding protein_coding MGP_WSBEiJ_T0024916.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69226275 69233074 + MGP_WSBEiJ_P0024916 protein_coding protein_coding MGP_WSBEiJ_T0024917.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69227233 69272789 + MGP_WSBEiJ_P0024917 protein_coding protein_coding MGP_WSBEiJ_T0024918.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69229030 69246692 + protein_coding retained_intron MGP_WSBEiJ_T0024919.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69234812 69272537 + MGP_WSBEiJ_P0024919 protein_coding protein_coding MGP_WSBEiJ_T0024920.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69236898 69272356 + MGP_WSBEiJ_P0024920 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024921.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69239054 69245157 + MGP_WSBEiJ_P0024921 protein_coding protein_coding MGP_WSBEiJ_T0024922.1 MGP_WSBEiJ_G0016730.1 mouse_genomes_project 10 69241266 69251758 + protein_coding retained_intron MGP_WSBEiJ_T0025907.1 MGP_WSBEiJ_G0016981.1 mouse_genomes_project 10 84541592 84615966 - MGP_WSBEiJ_P0025907 Nuak1 protein_coding protein_coding MGP_WSBEiJ_T0025908.1 MGP_WSBEiJ_G0016981.1 mouse_genomes_project 10 84545991 84564653 - MGP_WSBEiJ_P0025908 Nuak1 protein_coding protein_coding MGP_WSBEiJ_T0005979.1 MGP_WSBEiJ_G0005005.1 mouse_genomes_project 10 6553206 6558174 - Gm28904 lincRNA lincRNA MGP_WSBEiJ_T0026235.1 MGP_WSBEiJ_G0017062.1 mouse_genomes_project 10 96886779 96887091 + MGP_WSBEiJ_P0026235 Gm5426 protein_coding protein_coding MGP_WSBEiJ_T0024530.1 MGP_WSBEiJ_G0016640.1 mouse_genomes_project 10 56682286 56691665 + MGP_WSBEiJ_P0024530 Smpdl3a protein_coding protein_coding MGP_WSBEiJ_T0024531.1 MGP_WSBEiJ_G0016640.1 mouse_genomes_project 10 56682325 56701896 + MGP_WSBEiJ_P0024531 Smpdl3a protein_coding protein_coding MGP_WSBEiJ_T0024532.1 MGP_WSBEiJ_G0016640.1 mouse_genomes_project 10 56682519 56696585 + Smpdl3a protein_coding processed_transcript MGP_WSBEiJ_T0024217.1 MGP_WSBEiJ_G0016529.1 mouse_genomes_project 10 31775424 31791045 - MGP_WSBEiJ_P0024217 Sult3a2 protein_coding protein_coding MGP_WSBEiJ_T0025876.1 MGP_WSBEiJ_G0016973.1 mouse_genomes_project 10 83110182 83110839 + MGP_WSBEiJ_P0025876 Gm4799 protein_coding protein_coding MGP_WSBEiJ_T0024005.1 MGP_WSBEiJ_G0016449.1 mouse_genomes_project 10 16783215 16785251 + MGP_WSBEiJ_P0024005 Olig3 protein_coding protein_coding MGP_WSBEiJ_T0016501.1 MGP_WSBEiJ_G0014548.1 mouse_genomes_project 10 17961191 17965230 - 4930403O15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0011086.1 MGP_WSBEiJ_G0009243.1 mouse_genomes_project 10 92672116 92672242 - Gm27582 misc_RNA misc_RNA MGP_WSBEiJ_T0026111.1 MGP_WSBEiJ_G0017031.1 mouse_genomes_project 10 91482154 91581445 - MGP_WSBEiJ_P0026111 Apaf1 protein_coding protein_coding MGP_WSBEiJ_T0026112.1 MGP_WSBEiJ_G0017031.1 mouse_genomes_project 10 91482156 91484435 - Apaf1 protein_coding retained_intron MGP_WSBEiJ_T0026113.1 MGP_WSBEiJ_G0017031.1 mouse_genomes_project 10 91482161 91581553 - MGP_WSBEiJ_P0026113 Apaf1 protein_coding protein_coding MGP_WSBEiJ_T0026114.1 MGP_WSBEiJ_G0017031.1 mouse_genomes_project 10 91483446 91581487 - MGP_WSBEiJ_P0026114 Apaf1 protein_coding protein_coding MGP_WSBEiJ_T0026115.1 MGP_WSBEiJ_G0017031.1 mouse_genomes_project 10 91488565 91493237 - Apaf1 protein_coding processed_transcript MGP_WSBEiJ_T0026116.1 MGP_WSBEiJ_G0017031.1 mouse_genomes_project 10 91489566 91492548 - Apaf1 protein_coding retained_intron MGP_WSBEiJ_T0026117.1 MGP_WSBEiJ_G0017031.1 mouse_genomes_project 10 91561358 91581212 - MGP_WSBEiJ_P0026117 Apaf1 protein_coding protein_coding MGP_WSBEiJ_T0026118.1 MGP_WSBEiJ_G0017031.1 mouse_genomes_project 10 91563838 91581553 - MGP_WSBEiJ_P0026118 Apaf1 protein_coding protein_coding MGP_WSBEiJ_T0023916.1 MGP_WSBEiJ_G0016424.1 mouse_genomes_project 10 10311663 10340270 - MGP_WSBEiJ_P0023916 Zc2hc1b protein_coding protein_coding MGP_WSBEiJ_T0009463.1 MGP_WSBEiJ_G0007620.1 mouse_genomes_project 10 85499041 85499142 - Gm27392 miRNA miRNA MGP_WSBEiJ_T0003012.1 MGP_WSBEiJ_G0002816.1 mouse_genomes_project 10 95215163 95260658 - Tmcc3os antisense antisense MGP_WSBEiJ_T0024431.1 MGP_WSBEiJ_G0016601.1 mouse_genomes_project 10 42473754 42544902 - MGP_WSBEiJ_P0024431 Aim1 protein_coding protein_coding MGP_WSBEiJ_T0024432.1 MGP_WSBEiJ_G0016601.1 mouse_genomes_project 10 42473758 42682332 - MGP_WSBEiJ_P0024432 Aim1 protein_coding protein_coding MGP_WSBEiJ_T0024872.1 MGP_WSBEiJ_G0016729.1 mouse_genomes_project 10 68535578 68553854 - MGP_WSBEiJ_P0024872 Cdk1 protein_coding protein_coding MGP_WSBEiJ_T0024873.1 MGP_WSBEiJ_G0016729.1 mouse_genomes_project 10 68537267 68553819 - MGP_WSBEiJ_P0024873 Cdk1 protein_coding protein_coding MGP_WSBEiJ_T0024874.1 MGP_WSBEiJ_G0016729.1 mouse_genomes_project 10 68539613 68541861 - Cdk1 protein_coding retained_intron MGP_WSBEiJ_T0024875.1 MGP_WSBEiJ_G0016729.1 mouse_genomes_project 10 68539744 68544642 - Cdk1 protein_coding retained_intron MGP_WSBEiJ_T0024876.1 MGP_WSBEiJ_G0016729.1 mouse_genomes_project 10 68539780 68551640 - MGP_WSBEiJ_P0024876 Cdk1 protein_coding protein_coding MGP_WSBEiJ_T0024877.1 MGP_WSBEiJ_G0016729.1 mouse_genomes_project 10 68539818 68544566 - Cdk1 protein_coding retained_intron MGP_WSBEiJ_T0024878.1 MGP_WSBEiJ_G0016729.1 mouse_genomes_project 10 68544136 68553826 - Cdk1 protein_coding retained_intron MGP_WSBEiJ_T0097661.1 MGP_WSBEiJ_G0036324.1 mouse_genomes_project 10 110739846 110739952 - Gm23041 snRNA snRNA MGP_WSBEiJ_T0098867.1 MGP_WSBEiJ_G0037530.1 mouse_genomes_project 10 93259510 93259653 - Gm24241 snoRNA snoRNA MGP_WSBEiJ_T0026525.1 MGP_WSBEiJ_G0017164.1 mouse_genomes_project 10 123374900 123428400 - MGP_WSBEiJ_P0026525 Tbc1d30 protein_coding protein_coding MGP_WSBEiJ_T0026871.1 MGP_WSBEiJ_G0017297.1 mouse_genomes_project 10 132136304 132140266 + MGP_WSBEiJ_P0026871 Olfr794 protein_coding protein_coding MGP_WSBEiJ_T0026872.1 MGP_WSBEiJ_G0017297.1 mouse_genomes_project 10 132139303 132140266 + MGP_WSBEiJ_P0026872 Olfr794 protein_coding protein_coding MGP_WSBEiJ_T0025631.1 MGP_WSBEiJ_G0016914.1 mouse_genomes_project 10 80831465 80834950 - MGP_WSBEiJ_P0025631 protein_coding protein_coding MGP_WSBEiJ_T0000805.1 MGP_WSBEiJ_G0000744.1 mouse_genomes_project 10 120813313 120816008 + TEC TEC MGP_WSBEiJ_T0097613.1 MGP_WSBEiJ_G0036276.1 mouse_genomes_project 10 9491536 9491703 + Gm23680 snRNA snRNA MGP_WSBEiJ_T0026777.1 MGP_WSBEiJ_G0017247.1 mouse_genomes_project 10 130877270 130908754 + MGP_WSBEiJ_P0026777 Rnf41 protein_coding protein_coding MGP_WSBEiJ_T0026778.1 MGP_WSBEiJ_G0017247.1 mouse_genomes_project 10 130877270 130908754 + MGP_WSBEiJ_P0026778 Rnf41 protein_coding protein_coding MGP_WSBEiJ_T0025843.1 MGP_WSBEiJ_G0016963.1 mouse_genomes_project 10 82189030 82190550 + MGP_WSBEiJ_P0025843 protein_coding protein_coding MGP_WSBEiJ_T0009447.1 MGP_WSBEiJ_G0007604.1 mouse_genomes_project 10 78189929 78190000 - Mir6907 miRNA miRNA MGP_WSBEiJ_T0012200.1 MGP_WSBEiJ_G0010330.1 mouse_genomes_project 10 130348763 130349058 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098840.1 MGP_WSBEiJ_G0037503.1 mouse_genomes_project 10 22965838 22965969 - Gm25016 snoRNA snoRNA MGP_WSBEiJ_T0097612.1 MGP_WSBEiJ_G0036275.1 mouse_genomes_project 10 7210442 7210606 + Gm25682 snRNA snRNA MGP_WSBEiJ_T0024553.1 MGP_WSBEiJ_G0016647.1 mouse_genomes_project 10 57331092 57335693 - MGP_WSBEiJ_P0024553 Gm17542 protein_coding protein_coding MGP_WSBEiJ_T0100459.1 MGP_WSBEiJ_G0038918.1 mouse_genomes_project 10 132184320 132184735 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0024385.1 MGP_WSBEiJ_G0016587.1 mouse_genomes_project 10 40945864 40981555 + MGP_WSBEiJ_P0024385 Snx3 protein_coding protein_coding MGP_WSBEiJ_T0024386.1 MGP_WSBEiJ_G0016587.1 mouse_genomes_project 10 40945865 40982138 + MGP_WSBEiJ_P0024386 Snx3 protein_coding protein_coding MGP_WSBEiJ_T0024387.1 MGP_WSBEiJ_G0016587.1 mouse_genomes_project 10 40946124 40982149 + MGP_WSBEiJ_P0024387 Snx3 protein_coding protein_coding MGP_WSBEiJ_T0023962.1 MGP_WSBEiJ_G0016435.1 mouse_genomes_project 10 11966737 11969329 - MGP_WSBEiJ_P0023962 Gje1 protein_coding protein_coding MGP_WSBEiJ_T0096755.1 MGP_WSBEiJ_G0035436.1 mouse_genomes_project 10 57410028 57410597 - pseudogene pseudogene MGP_WSBEiJ_T0011074.1 MGP_WSBEiJ_G0009231.1 mouse_genomes_project 10 40745673 40745918 + Gm23533 misc_RNA misc_RNA MGP_WSBEiJ_T0098826.1 MGP_WSBEiJ_G0037489.1 mouse_genomes_project 10 4878187 4878308 - Gm24726 snoRNA snoRNA MGP_WSBEiJ_T0098855.1 MGP_WSBEiJ_G0037518.1 mouse_genomes_project 10 57322065 57322141 - Gm25055 snoRNA snoRNA MGP_WSBEiJ_T0005978.1 MGP_WSBEiJ_G0005004.1 mouse_genomes_project 10 5939731 5941998 + Gm26674 lincRNA lincRNA MGP_WSBEiJ_T0005993.1 MGP_WSBEiJ_G0005014.1 mouse_genomes_project 10 19216145 19219290 + Gm29323 lincRNA lincRNA MGP_WSBEiJ_T0024640.1 MGP_WSBEiJ_G0016668.1 mouse_genomes_project 10 59501942 59576125 - MGP_WSBEiJ_P0024640 Unc5b protein_coding protein_coding MGP_WSBEiJ_T0000788.1 MGP_WSBEiJ_G0000728.1 mouse_genomes_project 10 62052261 62052603 + TEC TEC MGP_WSBEiJ_T0011084.1 MGP_WSBEiJ_G0009241.1 mouse_genomes_project 10 92639743 92640006 - Gm27588 misc_RNA misc_RNA MGP_WSBEiJ_T0012167.1 MGP_WSBEiJ_G0010297.1 mouse_genomes_project 10 50934908 50935468 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024102.1 MGP_WSBEiJ_G0016485.1 mouse_genomes_project 10 21593343 21594381 - MGP_WSBEiJ_P0024102 Taar6 protein_coding protein_coding MGP_WSBEiJ_T0024231.1 MGP_WSBEiJ_G0016542.1 mouse_genomes_project 10 32324503 32328382 + MGP_WSBEiJ_P0024231 Tspyl4 protein_coding protein_coding MGP_WSBEiJ_T0025630.1 MGP_WSBEiJ_G0016913.1 mouse_genomes_project 10 80810676 80821906 - MGP_WSBEiJ_P0025630 Lingo3 protein_coding protein_coding MGP_WSBEiJ_T0023917.1 MGP_WSBEiJ_G0016425.1 mouse_genomes_project 10 10340918 10356049 - MGP_WSBEiJ_P0023917 Ltv1 protein_coding protein_coding MGP_WSBEiJ_T0003024.1 MGP_WSBEiJ_G0002823.1 mouse_genomes_project 10 121416778 121443588 - Grip1os3 antisense antisense MGP_WSBEiJ_T0003025.1 MGP_WSBEiJ_G0002823.1 mouse_genomes_project 10 121426026 121444137 - Grip1os3 antisense antisense MGP_WSBEiJ_T0003026.1 MGP_WSBEiJ_G0002823.1 mouse_genomes_project 10 121426026 121443538 - Grip1os3 antisense antisense MGP_WSBEiJ_T0026431.1 MGP_WSBEiJ_G0017133.1 mouse_genomes_project 10 118557823 118695766 - MGP_WSBEiJ_P0026431 Myrfl protein_coding protein_coding MGP_WSBEiJ_T0002978.1 MGP_WSBEiJ_G0002790.1 mouse_genomes_project 10 75675700 75678870 + antisense antisense MGP_WSBEiJ_T0024605.1 MGP_WSBEiJ_G0016662.1 mouse_genomes_project 10 58876116 58922166 - MGP_WSBEiJ_P0024605 Chst3 protein_coding protein_coding MGP_WSBEiJ_T0024606.1 MGP_WSBEiJ_G0016662.1 mouse_genomes_project 10 58886296 58890406 - MGP_WSBEiJ_P0024606 Chst3 protein_coding protein_coding MGP_WSBEiJ_T0024607.1 MGP_WSBEiJ_G0016662.1 mouse_genomes_project 10 58887304 58896068 - MGP_WSBEiJ_P0024607 Chst3 protein_coding protein_coding MGP_WSBEiJ_T0025028.1 MGP_WSBEiJ_G0016748.1 mouse_genomes_project 10 74830696 74848499 + MGP_WSBEiJ_P0025028 Adora2a protein_coding protein_coding MGP_WSBEiJ_T0096902.1 MGP_WSBEiJ_G0035583.1 mouse_genomes_project 10 78300110 78300226 + Gm25164 rRNA rRNA MGP_WSBEiJ_T0024115.1 MGP_WSBEiJ_G0016495.1 mouse_genomes_project 10 22302087 22371558 - MGP_WSBEiJ_P0024115 Enpp1 protein_coding protein_coding MGP_WSBEiJ_T0024116.1 MGP_WSBEiJ_G0016495.1 mouse_genomes_project 10 22305609 22371559 - MGP_WSBEiJ_P0024116 Enpp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024117.1 MGP_WSBEiJ_G0016495.1 mouse_genomes_project 10 22305980 22371391 - MGP_WSBEiJ_P0024117 Enpp1 protein_coding protein_coding MGP_WSBEiJ_T0024118.1 MGP_WSBEiJ_G0016495.1 mouse_genomes_project 10 22311772 22371397 - Enpp1 protein_coding retained_intron MGP_WSBEiJ_T0024119.1 MGP_WSBEiJ_G0016495.1 mouse_genomes_project 10 22332674 22338465 - Enpp1 protein_coding retained_intron MGP_WSBEiJ_T0003005.1 MGP_WSBEiJ_G0002811.1 mouse_genomes_project 10 87187160 87188413 + Gm16280 antisense antisense MGP_WSBEiJ_T0023751.1 MGP_WSBEiJ_G0016392.1 mouse_genomes_project 10 2852822 2864552 - MGP_WSBEiJ_P0023751 Mtrf1l protein_coding protein_coding MGP_WSBEiJ_T0023752.1 MGP_WSBEiJ_G0016392.1 mouse_genomes_project 10 2854147 2856691 - Mtrf1l protein_coding processed_transcript MGP_WSBEiJ_T0023753.1 MGP_WSBEiJ_G0016392.1 mouse_genomes_project 10 2859842 2864188 - Mtrf1l protein_coding processed_transcript MGP_WSBEiJ_T0006010.1 MGP_WSBEiJ_G0005031.1 mouse_genomes_project 10 64151244 64152086 - Gm28881 lincRNA lincRNA MGP_WSBEiJ_T0012162.1 MGP_WSBEiJ_G0010292.1 mouse_genomes_project 10 40873005 40873182 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012195.1 MGP_WSBEiJ_G0010325.1 mouse_genomes_project 10 107413482 107413875 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000793.1 MGP_WSBEiJ_G0000733.1 mouse_genomes_project 10 84232000 84232470 + TEC TEC MGP_WSBEiJ_T0005997.1 MGP_WSBEiJ_G0005018.1 mouse_genomes_project 10 32322973 32325969 - Gm26564 lincRNA lincRNA MGP_WSBEiJ_T0024677.1 MGP_WSBEiJ_G0016682.1 mouse_genomes_project 10 60509698 60518031 + MGP_WSBEiJ_P0024677 Tysnd1 protein_coding protein_coding MGP_WSBEiJ_T0024952.1 MGP_WSBEiJ_G0016739.1 mouse_genomes_project 10 70674425 70689217 - MGP_WSBEiJ_P0024952 Cisd1 protein_coding protein_coding MGP_WSBEiJ_T0096753.1 MGP_WSBEiJ_G0035434.1 mouse_genomes_project 10 15356084 15356322 + pseudogene pseudogene MGP_WSBEiJ_T0025144.1 MGP_WSBEiJ_G0016783.1 mouse_genomes_project 10 76349658 76367056 - MGP_WSBEiJ_P0025144 Col6a1 protein_coding protein_coding MGP_WSBEiJ_T0025145.1 MGP_WSBEiJ_G0016783.1 mouse_genomes_project 10 76355899 76360119 - Col6a1 protein_coding retained_intron MGP_WSBEiJ_T0024377.1 MGP_WSBEiJ_G0016585.1 mouse_genomes_project 10 40610707 40706672 - MGP_WSBEiJ_P0024377 Foxo3 protein_coding protein_coding MGP_WSBEiJ_T0024378.1 MGP_WSBEiJ_G0016585.1 mouse_genomes_project 10 40614657 40706662 - MGP_WSBEiJ_P0024378 Foxo3 protein_coding protein_coding MGP_WSBEiJ_T0024379.1 MGP_WSBEiJ_G0016585.1 mouse_genomes_project 10 40625139 40706616 - MGP_WSBEiJ_P0024379 Foxo3 protein_coding protein_coding MGP_WSBEiJ_T0024380.1 MGP_WSBEiJ_G0016585.1 mouse_genomes_project 10 40626421 40688247 - MGP_WSBEiJ_P0024380 Foxo3 protein_coding protein_coding MGP_WSBEiJ_T0024381.1 MGP_WSBEiJ_G0016585.1 mouse_genomes_project 10 40677240 40706675 - MGP_WSBEiJ_P0024381 Foxo3 protein_coding protein_coding MGP_WSBEiJ_T0098866.1 MGP_WSBEiJ_G0037529.1 mouse_genomes_project 10 91622000 91622246 - Gm24119 snoRNA snoRNA MGP_WSBEiJ_T0026580.1 MGP_WSBEiJ_G0017184.1 mouse_genomes_project 10 129366486 129378017 - MGP_WSBEiJ_P0026580 Mettl21b protein_coding protein_coding MGP_WSBEiJ_T0096762.1 MGP_WSBEiJ_G0035443.1 mouse_genomes_project 10 118345449 118348659 + pseudogene pseudogene MGP_WSBEiJ_T0002959.1 MGP_WSBEiJ_G0002774.1 mouse_genomes_project 10 41162941 41163424 - Gm15200 antisense antisense MGP_WSBEiJ_T0097649.1 MGP_WSBEiJ_G0036312.1 mouse_genomes_project 10 84992160 84992257 - Gm24226 snRNA snRNA MGP_WSBEiJ_T0006053.1 MGP_WSBEiJ_G0005055.1 mouse_genomes_project 10 95325563 95340999 - Cep83os lincRNA lincRNA MGP_WSBEiJ_T0097626.1 MGP_WSBEiJ_G0036289.1 mouse_genomes_project 10 43150824 43150912 - Gm22087 snRNA snRNA MGP_WSBEiJ_T0016526.1 MGP_WSBEiJ_G0014554.1 mouse_genomes_project 10 69466693 69477892 + Mrln processed_transcript lincRNA MGP_WSBEiJ_T0016527.1 MGP_WSBEiJ_G0014554.1 mouse_genomes_project 10 69466696 69482324 + Mrln processed_transcript lincRNA MGP_WSBEiJ_T0016528.1 MGP_WSBEiJ_G0014554.1 mouse_genomes_project 10 69466739 69482193 + Mrln processed_transcript lincRNA MGP_WSBEiJ_T0016529.1 MGP_WSBEiJ_G0014554.1 mouse_genomes_project 10 69466754 69473022 + Mrln processed_transcript lincRNA MGP_WSBEiJ_T0016530.1 MGP_WSBEiJ_G0014554.1 mouse_genomes_project 10 69479503 69482323 + Mrln processed_transcript retained_intron MGP_WSBEiJ_T0025217.1 MGP_WSBEiJ_G0016800.1 mouse_genomes_project 10 77423800 77424163 + MGP_WSBEiJ_P0025217 Gm10100 protein_coding protein_coding MGP_WSBEiJ_T0009470.1 MGP_WSBEiJ_G0007627.1 mouse_genomes_project 10 94580374 94580470 - Mir331 miRNA miRNA MGP_WSBEiJ_T0099994.1 MGP_WSBEiJ_G0038642.1 mouse_genomes_project 10 119467973 119469503 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099995.1 MGP_WSBEiJ_G0038642.1 mouse_genomes_project 10 119468346 119468909 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0002941.1 MGP_WSBEiJ_G0002761.1 mouse_genomes_project 10 11357866 11363423 - Gm28289 antisense antisense MGP_WSBEiJ_T0025156.1 MGP_WSBEiJ_G0016785.1 mouse_genomes_project 10 76660391 76671170 + MGP_WSBEiJ_P0025156 Gm10787 protein_coding protein_coding MGP_WSBEiJ_T0098882.1 MGP_WSBEiJ_G0037545.1 mouse_genomes_project 10 129146344 129146471 - Gm24179 snoRNA snoRNA MGP_WSBEiJ_T0025599.1 MGP_WSBEiJ_G0016902.1 mouse_genomes_project 10 80608019 80624744 - MGP_WSBEiJ_P0025599 Btbd2 protein_coding protein_coding MGP_WSBEiJ_T0025600.1 MGP_WSBEiJ_G0016902.1 mouse_genomes_project 10 80608019 80624163 - MGP_WSBEiJ_P0025600 Btbd2 protein_coding protein_coding MGP_WSBEiJ_T0025601.1 MGP_WSBEiJ_G0016902.1 mouse_genomes_project 10 80608025 80610052 - Btbd2 protein_coding retained_intron MGP_WSBEiJ_T0025602.1 MGP_WSBEiJ_G0016902.1 mouse_genomes_project 10 80609535 80615399 - Btbd2 protein_coding retained_intron MGP_WSBEiJ_T0025603.1 MGP_WSBEiJ_G0016902.1 mouse_genomes_project 10 80610057 80623807 - MGP_WSBEiJ_P0025603 Btbd2 protein_coding protein_coding MGP_WSBEiJ_T0012186.1 MGP_WSBEiJ_G0010316.1 mouse_genomes_project 10 81544641 81544935 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025137.1 MGP_WSBEiJ_G0016781.1 mouse_genomes_project 10 76205398 76220264 + MGP_WSBEiJ_P0025137 Ftcd protein_coding protein_coding MGP_WSBEiJ_T0025138.1 MGP_WSBEiJ_G0016781.1 mouse_genomes_project 10 76205399 76220015 + MGP_WSBEiJ_P0025138 Ftcd protein_coding unknown_likely_coding MGP_WSBEiJ_T0025139.1 MGP_WSBEiJ_G0016781.1 mouse_genomes_project 10 76205402 76221041 + Ftcd protein_coding retained_intron MGP_WSBEiJ_T0025140.1 MGP_WSBEiJ_G0016781.1 mouse_genomes_project 10 76217836 76219271 + Ftcd protein_coding processed_transcript MGP_WSBEiJ_T0024960.1 MGP_WSBEiJ_G0016741.1 mouse_genomes_project 10 72101433 72121571 + MGP_WSBEiJ_P0024960 Zwint protein_coding protein_coding MGP_WSBEiJ_T0024961.1 MGP_WSBEiJ_G0016741.1 mouse_genomes_project 10 72101483 72116400 + MGP_WSBEiJ_P0024961 Zwint protein_coding protein_coding MGP_WSBEiJ_T0024962.1 MGP_WSBEiJ_G0016741.1 mouse_genomes_project 10 72101484 72115776 + MGP_WSBEiJ_P0024962 Zwint protein_coding protein_coding MGP_WSBEiJ_T0024963.1 MGP_WSBEiJ_G0016741.1 mouse_genomes_project 10 72102031 72103187 + Zwint protein_coding retained_intron MGP_WSBEiJ_T0024964.1 MGP_WSBEiJ_G0016741.1 mouse_genomes_project 10 72102825 72103977 + Zwint protein_coding retained_intron MGP_WSBEiJ_T0024965.1 MGP_WSBEiJ_G0016741.1 mouse_genomes_project 10 72103179 72120931 + Zwint protein_coding processed_transcript MGP_WSBEiJ_T0097633.1 MGP_WSBEiJ_G0036296.1 mouse_genomes_project 10 51674237 51674344 + Gm25664 snRNA snRNA MGP_WSBEiJ_T0023970.1 MGP_WSBEiJ_G0016439.1 mouse_genomes_project 10 15356079 15368577 - MGP_WSBEiJ_P0023970 Abracl protein_coding protein_coding MGP_WSBEiJ_T0026569.1 MGP_WSBEiJ_G0017182.1 mouse_genomes_project 10 129330435 129354694 + MGP_WSBEiJ_P0026569 Avil protein_coding protein_coding MGP_WSBEiJ_T0026570.1 MGP_WSBEiJ_G0017182.1 mouse_genomes_project 10 129330465 129338207 + MGP_WSBEiJ_P0026570 Avil protein_coding protein_coding MGP_WSBEiJ_T0026571.1 MGP_WSBEiJ_G0017182.1 mouse_genomes_project 10 129332728 129338279 + MGP_WSBEiJ_P0026571 Avil protein_coding protein_coding MGP_WSBEiJ_T0026572.1 MGP_WSBEiJ_G0017182.1 mouse_genomes_project 10 129332864 129354478 + MGP_WSBEiJ_P0026572 Avil protein_coding protein_coding MGP_WSBEiJ_T0009497.1 MGP_WSBEiJ_G0007654.1 mouse_genomes_project 10 130986092 130986155 - Mir6916 miRNA miRNA MGP_WSBEiJ_T0026605.1 MGP_WSBEiJ_G0017194.1 mouse_genomes_project 10 129528939 129536474 - MGP_WSBEiJ_P0026605 Arhgef25 protein_coding protein_coding MGP_WSBEiJ_T0026606.1 MGP_WSBEiJ_G0017194.1 mouse_genomes_project 10 129528939 129536243 - MGP_WSBEiJ_P0026606 Arhgef25 protein_coding protein_coding MGP_WSBEiJ_T0011089.1 MGP_WSBEiJ_G0009246.1 mouse_genomes_project 10 95606736 95607040 + Gm25266 misc_RNA misc_RNA MGP_WSBEiJ_T0003003.1 MGP_WSBEiJ_G0002809.1 mouse_genomes_project 10 86365274 86369302 + Gm15990 antisense antisense MGP_WSBEiJ_T0026885.1 MGP_WSBEiJ_G0017306.1 mouse_genomes_project 10 132375351 132376357 - MGP_WSBEiJ_P0026885 Olfr810 protein_coding protein_coding MGP_WSBEiJ_T0005985.1 MGP_WSBEiJ_G0005009.1 mouse_genomes_project 10 11165603 11210169 - Gm26835 lincRNA lincRNA MGP_WSBEiJ_T0024149.1 MGP_WSBEiJ_G0016505.1 mouse_genomes_project 10 23989698 24096111 - MGP_WSBEiJ_P0024149 L3mbtl3 protein_coding protein_coding MGP_WSBEiJ_T0024150.1 MGP_WSBEiJ_G0016505.1 mouse_genomes_project 10 23989701 24096111 - MGP_WSBEiJ_P0024150 L3mbtl3 protein_coding protein_coding MGP_WSBEiJ_T0024151.1 MGP_WSBEiJ_G0016505.1 mouse_genomes_project 10 23990682 24097343 - MGP_WSBEiJ_P0024151 L3mbtl3 protein_coding protein_coding MGP_WSBEiJ_T0097664.1 MGP_WSBEiJ_G0036327.1 mouse_genomes_project 10 114523536 114523696 + Gm22507 snRNA snRNA MGP_WSBEiJ_T0097641.1 MGP_WSBEiJ_G0036304.1 mouse_genomes_project 10 66339868 66339969 - Gm26359 snRNA snRNA MGP_WSBEiJ_T0024249.1 MGP_WSBEiJ_G0016548.1 mouse_genomes_project 10 37075966 37077205 - MGP_WSBEiJ_P0024249 Rfpl4b protein_coding protein_coding MGP_WSBEiJ_T0003009.1 MGP_WSBEiJ_G0002814.1 mouse_genomes_project 10 88779750 88785402 - Gm16235 antisense antisense MGP_WSBEiJ_T0003010.1 MGP_WSBEiJ_G0002814.1 mouse_genomes_project 10 88780668 88781450 - Gm16235 antisense antisense MGP_WSBEiJ_T0005999.1 MGP_WSBEiJ_G0005020.1 mouse_genomes_project 10 38153666 38155140 - Gm26824 lincRNA lincRNA MGP_WSBEiJ_T0026328.1 MGP_WSBEiJ_G0017100.1 mouse_genomes_project 10 109642845 109730805 + MGP_WSBEiJ_P0026328 Pawr protein_coding protein_coding MGP_WSBEiJ_T0026852.1 MGP_WSBEiJ_G0017282.1 mouse_genomes_project 10 131824724 131830685 + MGP_WSBEiJ_P0026852 protein_coding protein_coding MGP_WSBEiJ_T0024089.1 MGP_WSBEiJ_G0016477.1 mouse_genomes_project 10 21406939 21442261 + MGP_WSBEiJ_P0024089 Slc18b1 protein_coding protein_coding MGP_WSBEiJ_T0024090.1 MGP_WSBEiJ_G0016477.1 mouse_genomes_project 10 21406939 21442261 + MGP_WSBEiJ_P0024090 Slc18b1 protein_coding protein_coding MGP_WSBEiJ_T0024091.1 MGP_WSBEiJ_G0016477.1 mouse_genomes_project 10 21407005 21417136 + MGP_WSBEiJ_P0024091 Slc18b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024092.1 MGP_WSBEiJ_G0016477.1 mouse_genomes_project 10 21407153 21417088 + MGP_WSBEiJ_P0024092 Slc18b1 protein_coding protein_coding MGP_WSBEiJ_T0024093.1 MGP_WSBEiJ_G0016477.1 mouse_genomes_project 10 21417152 21431417 + MGP_WSBEiJ_P0024093 Slc18b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024094.1 MGP_WSBEiJ_G0016477.1 mouse_genomes_project 10 21437914 21440511 + Slc18b1 protein_coding retained_intron MGP_WSBEiJ_T0006034.1 MGP_WSBEiJ_G0005048.1 mouse_genomes_project 10 88712277 88718096 - Gm26546 lincRNA lincRNA MGP_WSBEiJ_T0025293.1 MGP_WSBEiJ_G0016823.1 mouse_genomes_project 10 78572362 78601852 + MGP_WSBEiJ_P0025293 Slc1a6 protein_coding protein_coding MGP_WSBEiJ_T0025531.1 MGP_WSBEiJ_G0016886.1 mouse_genomes_project 10 80245358 80253321 - Pcsk4 protein_coding retained_intron MGP_WSBEiJ_T0025532.1 MGP_WSBEiJ_G0016886.1 mouse_genomes_project 10 80245358 80253323 - MGP_WSBEiJ_P0025532 Pcsk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025533.1 MGP_WSBEiJ_G0016886.1 mouse_genomes_project 10 80245358 80253366 - MGP_WSBEiJ_P0025533 Pcsk4 protein_coding protein_coding MGP_WSBEiJ_T0025534.1 MGP_WSBEiJ_G0016886.1 mouse_genomes_project 10 80245362 80247203 - Pcsk4 protein_coding retained_intron MGP_WSBEiJ_T0025535.1 MGP_WSBEiJ_G0016886.1 mouse_genomes_project 10 80245362 80247202 - Pcsk4 protein_coding retained_intron MGP_WSBEiJ_T0025536.1 MGP_WSBEiJ_G0016886.1 mouse_genomes_project 10 80246197 80253267 - MGP_WSBEiJ_P0025536 Pcsk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025878.1 MGP_WSBEiJ_G0016975.1 mouse_genomes_project 10 83400710 83504848 - MGP_WSBEiJ_P0025878 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025879.1 MGP_WSBEiJ_G0016975.1 mouse_genomes_project 10 83476244 83479534 - protein_coding processed_transcript MGP_WSBEiJ_T0025880.1 MGP_WSBEiJ_G0016975.1 mouse_genomes_project 10 83493704 83501046 - MGP_WSBEiJ_P0025880 protein_coding protein_coding MGP_WSBEiJ_T0025881.1 MGP_WSBEiJ_G0016975.1 mouse_genomes_project 10 83493831 83516242 - MGP_WSBEiJ_P0025881 protein_coding protein_coding MGP_WSBEiJ_T0025882.1 MGP_WSBEiJ_G0016975.1 mouse_genomes_project 10 83494061 83513557 - MGP_WSBEiJ_P0025882 protein_coding protein_coding MGP_WSBEiJ_T0099991.1 MGP_WSBEiJ_G0038640.1 mouse_genomes_project 10 87187878 87191116 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0026246.1 MGP_WSBEiJ_G0017071.1 mouse_genomes_project 10 99835473 99895796 + MGP_WSBEiJ_P0026246 Atp2b1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026438.1 MGP_WSBEiJ_G0017139.1 mouse_genomes_project 10 118887707 118969493 - MGP_WSBEiJ_P0026438 Frs2 protein_coding protein_coding MGP_WSBEiJ_T0025857.1 MGP_WSBEiJ_G0016969.1 mouse_genomes_project 10 82796951 82839553 - MGP_WSBEiJ_P0025857 Glt8d2 protein_coding protein_coding MGP_WSBEiJ_T0025858.1 MGP_WSBEiJ_G0016969.1 mouse_genomes_project 10 82797824 82799986 - Glt8d2 protein_coding retained_intron MGP_WSBEiJ_T0025859.1 MGP_WSBEiJ_G0016969.1 mouse_genomes_project 10 82798077 82805662 - MGP_WSBEiJ_P0025859 Glt8d2 protein_coding protein_coding MGP_WSBEiJ_T0025860.1 MGP_WSBEiJ_G0016969.1 mouse_genomes_project 10 82799314 82839520 - MGP_WSBEiJ_P0025860 Glt8d2 protein_coding protein_coding MGP_WSBEiJ_T0025861.1 MGP_WSBEiJ_G0016969.1 mouse_genomes_project 10 82801566 82839520 - MGP_WSBEiJ_P0025861 Glt8d2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025862.1 MGP_WSBEiJ_G0016969.1 mouse_genomes_project 10 82810710 82816536 - MGP_WSBEiJ_P0025862 Glt8d2 protein_coding protein_coding MGP_WSBEiJ_T0025863.1 MGP_WSBEiJ_G0016969.1 mouse_genomes_project 10 82815324 82839532 - Glt8d2 protein_coding retained_intron MGP_WSBEiJ_T0026607.1 MGP_WSBEiJ_G0017195.1 mouse_genomes_project 10 129536797 129543091 - MGP_WSBEiJ_P0026607 Dtx3 protein_coding protein_coding MGP_WSBEiJ_T0026608.1 MGP_WSBEiJ_G0017195.1 mouse_genomes_project 10 129536797 129543091 - MGP_WSBEiJ_P0026608 Dtx3 protein_coding protein_coding MGP_WSBEiJ_T0026609.1 MGP_WSBEiJ_G0017195.1 mouse_genomes_project 10 129537060 129543109 - MGP_WSBEiJ_P0026609 Dtx3 protein_coding protein_coding MGP_WSBEiJ_T0026610.1 MGP_WSBEiJ_G0017195.1 mouse_genomes_project 10 129537244 129541854 - MGP_WSBEiJ_P0026610 Dtx3 protein_coding protein_coding MGP_WSBEiJ_T0026611.1 MGP_WSBEiJ_G0017195.1 mouse_genomes_project 10 129539410 129543110 - MGP_WSBEiJ_P0026611 Dtx3 protein_coding protein_coding MGP_WSBEiJ_T0026612.1 MGP_WSBEiJ_G0017195.1 mouse_genomes_project 10 129539939 129543101 - Dtx3 protein_coding retained_intron MGP_WSBEiJ_T0024059.1 MGP_WSBEiJ_G0016467.1 mouse_genomes_project 10 19076052 19105291 + MGP_WSBEiJ_P0024059 1700020N01Rik protein_coding protein_coding MGP_WSBEiJ_T0024060.1 MGP_WSBEiJ_G0016467.1 mouse_genomes_project 10 19099313 19104680 + 1700020N01Rik protein_coding processed_transcript MGP_WSBEiJ_T0003011.1 MGP_WSBEiJ_G0002815.1 mouse_genomes_project 10 94281633 94291651 - Gm15915 antisense antisense MGP_WSBEiJ_T0025989.1 MGP_WSBEiJ_G0017008.1 mouse_genomes_project 10 87807985 87877723 + MGP_WSBEiJ_P0025989 Pah protein_coding protein_coding MGP_WSBEiJ_T0025990.1 MGP_WSBEiJ_G0017008.1 mouse_genomes_project 10 87808120 87877621 + MGP_WSBEiJ_P0025990 Pah protein_coding protein_coding MGP_WSBEiJ_T0025991.1 MGP_WSBEiJ_G0017008.1 mouse_genomes_project 10 87808217 87877442 + MGP_WSBEiJ_P0025991 Pah protein_coding protein_coding MGP_WSBEiJ_T0025992.1 MGP_WSBEiJ_G0017008.1 mouse_genomes_project 10 87836493 87863047 + MGP_WSBEiJ_P0025992 Pah protein_coding protein_coding MGP_WSBEiJ_T0024613.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020075 59385720 - MGP_WSBEiJ_P0024613 Cdh23 protein_coding protein_coding MGP_WSBEiJ_T0024614.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020075 59385720 - MGP_WSBEiJ_P0024614 Cdh23 protein_coding protein_coding MGP_WSBEiJ_T0024615.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020077 59426466 - MGP_WSBEiJ_P0024615 Cdh23 protein_coding protein_coding MGP_WSBEiJ_T0024616.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020077 59426466 - MGP_WSBEiJ_P0024616 Cdh23 protein_coding protein_coding MGP_WSBEiJ_T0024617.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020077 59426466 - MGP_WSBEiJ_P0024617 Cdh23 protein_coding protein_coding MGP_WSBEiJ_T0024618.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020595 59040690 - Cdh23 protein_coding processed_transcript MGP_WSBEiJ_T0024619.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020595 59040690 - Cdh23 protein_coding processed_transcript MGP_WSBEiJ_T0024620.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020620 59385720 - Cdh23 protein_coding retained_intron MGP_WSBEiJ_T0024621.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020620 59385720 - Cdh23 protein_coding retained_intron MGP_WSBEiJ_T0024622.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59020673 59022992 - Cdh23 protein_coding retained_intron MGP_WSBEiJ_T0024629.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59099331 59110907 - Cdh23 protein_coding retained_intron MGP_WSBEiJ_T0024630.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59100653 59130237 - Cdh23 protein_coding processed_transcript MGP_WSBEiJ_T0024631.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59100747 59104078 - Cdh23 protein_coding processed_transcript MGP_WSBEiJ_T0024633.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59309180 59426466 - Cdh23 protein_coding processed_transcript MGP_WSBEiJ_T0024634.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59355592 59381421 - Cdh23 protein_coding processed_transcript MGP_WSBEiJ_T0024635.1 MGP_WSBEiJ_G0016664.1 mouse_genomes_project 10 59385652 59417234 - Cdh23 protein_coding processed_transcript MGP_WSBEiJ_T0026335.1 MGP_WSBEiJ_G0017102.1 mouse_genomes_project 10 111076021 111237283 - MGP_WSBEiJ_P0026335 Nav3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026336.1 MGP_WSBEiJ_G0017102.1 mouse_genomes_project 10 111077420 111410750 - MGP_WSBEiJ_P0026336 Nav3 protein_coding protein_coding MGP_WSBEiJ_T0026337.1 MGP_WSBEiJ_G0017102.1 mouse_genomes_project 10 111077420 111227116 - MGP_WSBEiJ_P0026337 Nav3 protein_coding protein_coding MGP_WSBEiJ_T0026338.1 MGP_WSBEiJ_G0017102.1 mouse_genomes_project 10 111112094 111121586 - Nav3 protein_coding processed_transcript MGP_WSBEiJ_T0026339.1 MGP_WSBEiJ_G0017102.1 mouse_genomes_project 10 111152615 111164926 - MGP_WSBEiJ_P0026339 Nav3 protein_coding protein_coding MGP_WSBEiJ_T0026340.1 MGP_WSBEiJ_G0017102.1 mouse_genomes_project 10 111287547 111312164 - Nav3 protein_coding retained_intron MGP_WSBEiJ_T0026341.1 MGP_WSBEiJ_G0017102.1 mouse_genomes_project 10 111307244 111874290 - Nav3 protein_coding retained_intron MGP_WSBEiJ_T0025086.1 MGP_WSBEiJ_G0016764.1 mouse_genomes_project 10 75468707 75471242 + MGP_WSBEiJ_P0025086 Derl3 protein_coding protein_coding MGP_WSBEiJ_T0023747.1 MGP_WSBEiJ_G0016389.1 mouse_genomes_project 10 2621850 2634188 + MGP_WSBEiJ_P0023747 Myct1 protein_coding protein_coding MGP_WSBEiJ_T0025025.1 MGP_WSBEiJ_G0016746.1 mouse_genomes_project 10 74564499 74689942 + MGP_WSBEiJ_P0025025 Bcr protein_coding protein_coding MGP_WSBEiJ_T0098829.1 MGP_WSBEiJ_G0037492.1 mouse_genomes_project 10 7777900 7778031 + Gm23601 snoRNA snoRNA MGP_WSBEiJ_T0025288.1 MGP_WSBEiJ_G0016820.1 mouse_genomes_project 10 78402803 78409110 - MGP_WSBEiJ_P0025288 Olfr1357 protein_coding protein_coding MGP_WSBEiJ_T0025289.1 MGP_WSBEiJ_G0016820.1 mouse_genomes_project 10 78402803 78403815 - MGP_WSBEiJ_P0025289 Olfr1357 protein_coding protein_coding MGP_WSBEiJ_T0025290.1 MGP_WSBEiJ_G0016820.1 mouse_genomes_project 10 78403067 78409110 - MGP_WSBEiJ_P0025290 Olfr1357 protein_coding protein_coding MGP_WSBEiJ_T0025064.1 MGP_WSBEiJ_G0016754.1 mouse_genomes_project 10 75127027 75158018 + MGP_WSBEiJ_P0025064 Ggt5 protein_coding protein_coding MGP_WSBEiJ_T0025065.1 MGP_WSBEiJ_G0016754.1 mouse_genomes_project 10 75127068 75144463 + MGP_WSBEiJ_P0025065 Ggt5 protein_coding protein_coding MGP_WSBEiJ_T0025066.1 MGP_WSBEiJ_G0016754.1 mouse_genomes_project 10 75127479 75144465 + MGP_WSBEiJ_P0025066 Ggt5 protein_coding protein_coding MGP_WSBEiJ_T0025067.1 MGP_WSBEiJ_G0016754.1 mouse_genomes_project 10 75143142 75150267 + Ggt5 protein_coding processed_transcript MGP_WSBEiJ_T0024554.1 MGP_WSBEiJ_G0016648.1 mouse_genomes_project 10 57410815 57657621 + MGP_WSBEiJ_P0024554 Sh3rf3 protein_coding protein_coding MGP_WSBEiJ_T0024555.1 MGP_WSBEiJ_G0016648.1 mouse_genomes_project 10 57410914 57753910 + MGP_WSBEiJ_P0024555 Sh3rf3 protein_coding protein_coding MGP_WSBEiJ_T0024556.1 MGP_WSBEiJ_G0016648.1 mouse_genomes_project 10 57411515 57614376 + Sh3rf3 protein_coding retained_intron MGP_WSBEiJ_T0024557.1 MGP_WSBEiJ_G0016648.1 mouse_genomes_project 10 57674704 57720212 + Sh3rf3 protein_coding retained_intron MGP_WSBEiJ_T0024558.1 MGP_WSBEiJ_G0016648.1 mouse_genomes_project 10 57691133 57719690 + Sh3rf3 protein_coding processed_transcript MGP_WSBEiJ_T0026854.1 MGP_WSBEiJ_G0017284.1 mouse_genomes_project 10 131917202 131918227 + MGP_WSBEiJ_P0026854 Olfr780 protein_coding protein_coding MGP_WSBEiJ_T0026469.1 MGP_WSBEiJ_G0017150.1 mouse_genomes_project 10 120046309 120073462 + MGP_WSBEiJ_P0026469 Mdm1 protein_coding protein_coding MGP_WSBEiJ_T0026470.1 MGP_WSBEiJ_G0017150.1 mouse_genomes_project 10 120046309 120073462 + MGP_WSBEiJ_P0026470 Mdm1 protein_coding protein_coding MGP_WSBEiJ_T0026471.1 MGP_WSBEiJ_G0017150.1 mouse_genomes_project 10 120046309 120073462 + MGP_WSBEiJ_P0026471 Mdm1 protein_coding protein_coding MGP_WSBEiJ_T0026472.1 MGP_WSBEiJ_G0017150.1 mouse_genomes_project 10 120046309 120073462 + MGP_WSBEiJ_P0026472 Mdm1 protein_coding protein_coding MGP_WSBEiJ_T0026387.1 MGP_WSBEiJ_G0017123.1 mouse_genomes_project 10 117049309 117064883 - MGP_WSBEiJ_P0026387 Thap2 protein_coding protein_coding MGP_WSBEiJ_T0026386.1 MGP_WSBEiJ_G0017122.1 mouse_genomes_project 10 117014409 117037974 - MGP_WSBEiJ_P0026386 Tmem19 protein_coding protein_coding MGP_WSBEiJ_T0097646.1 MGP_WSBEiJ_G0036309.1 mouse_genomes_project 10 80412637 80412741 + Gm25044 snRNA snRNA MGP_WSBEiJ_T0009481.1 MGP_WSBEiJ_G0007638.1 mouse_genomes_project 10 122511215 122511335 - Mir763 miRNA miRNA MGP_WSBEiJ_T0026006.1 MGP_WSBEiJ_G0017012.1 mouse_genomes_project 10 88459645 88495996 + MGP_WSBEiJ_P0026006 Nup37 protein_coding protein_coding MGP_WSBEiJ_T0026007.1 MGP_WSBEiJ_G0017012.1 mouse_genomes_project 10 88459724 88495996 + MGP_WSBEiJ_P0026007 Nup37 protein_coding protein_coding MGP_WSBEiJ_T0096754.1 MGP_WSBEiJ_G0035435.1 mouse_genomes_project 10 42530010 42530558 + pseudogene pseudogene MGP_WSBEiJ_T0012160.1 MGP_WSBEiJ_G0010290.1 mouse_genomes_project 10 38038028 38038638 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026322.1 MGP_WSBEiJ_G0017095.1 mouse_genomes_project 10 108739035 108742266 - MGP_WSBEiJ_P0026322 Myf5 protein_coding protein_coding MGP_WSBEiJ_T0100462.1 MGP_WSBEiJ_G0038921.1 mouse_genomes_project 10 132702386 132703138 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0025689.1 MGP_WSBEiJ_G0016934.1 mouse_genomes_project 10 81241379 81261696 + MGP_WSBEiJ_P0025689 Zfr2 protein_coding protein_coding MGP_WSBEiJ_T0025690.1 MGP_WSBEiJ_G0016934.1 mouse_genomes_project 10 81241379 81245778 + MGP_WSBEiJ_P0025690 Zfr2 protein_coding protein_coding MGP_WSBEiJ_T0025691.1 MGP_WSBEiJ_G0016934.1 mouse_genomes_project 10 81241400 81245802 + Zfr2 protein_coding processed_transcript MGP_WSBEiJ_T0025692.1 MGP_WSBEiJ_G0016934.1 mouse_genomes_project 10 81241400 81251989 + Zfr2 protein_coding retained_intron MGP_WSBEiJ_T0025693.1 MGP_WSBEiJ_G0016934.1 mouse_genomes_project 10 81241411 81261694 + Zfr2 protein_coding retained_intron MGP_WSBEiJ_T0025694.1 MGP_WSBEiJ_G0016934.1 mouse_genomes_project 10 81257985 81261285 + MGP_WSBEiJ_P0025694 Zfr2 protein_coding protein_coding MGP_WSBEiJ_T0025695.1 MGP_WSBEiJ_G0016934.1 mouse_genomes_project 10 81258620 81260116 + Zfr2 protein_coding retained_intron MGP_WSBEiJ_T0024491.1 MGP_WSBEiJ_G0016628.1 mouse_genomes_project 10 52337942 52430625 - MGP_WSBEiJ_P0024491 Mcm9 protein_coding protein_coding MGP_WSBEiJ_T0024492.1 MGP_WSBEiJ_G0016628.1 mouse_genomes_project 10 52338937 52396195 - MGP_WSBEiJ_P0024492 Mcm9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024678.1 MGP_WSBEiJ_G0016683.1 mouse_genomes_project 10 60530578 60553778 + MGP_WSBEiJ_P0024678 Aifm2 protein_coding protein_coding MGP_WSBEiJ_T0024679.1 MGP_WSBEiJ_G0016683.1 mouse_genomes_project 10 60530601 60543078 + Aifm2 protein_coding retained_intron MGP_WSBEiJ_T0024680.1 MGP_WSBEiJ_G0016683.1 mouse_genomes_project 10 60530625 60554393 + MGP_WSBEiJ_P0024680 Aifm2 protein_coding protein_coding MGP_WSBEiJ_T0024681.1 MGP_WSBEiJ_G0016683.1 mouse_genomes_project 10 60530637 60553772 + MGP_WSBEiJ_P0024681 Aifm2 protein_coding protein_coding MGP_WSBEiJ_T0024682.1 MGP_WSBEiJ_G0016683.1 mouse_genomes_project 10 60530646 60531550 + Aifm2 protein_coding processed_transcript MGP_WSBEiJ_T0024683.1 MGP_WSBEiJ_G0016683.1 mouse_genomes_project 10 60535958 60553778 + MGP_WSBEiJ_P0024683 Aifm2 protein_coding protein_coding MGP_WSBEiJ_T0024684.1 MGP_WSBEiJ_G0016683.1 mouse_genomes_project 10 60543304 60549688 + Aifm2 protein_coding retained_intron MGP_WSBEiJ_T0023796.1 MGP_WSBEiJ_G0016397.1 mouse_genomes_project 10 4193465 4212874 - MGP_WSBEiJ_P0023796 Cnksr3 protein_coding protein_coding MGP_WSBEiJ_T0023797.1 MGP_WSBEiJ_G0016397.1 mouse_genomes_project 10 4193465 4293026 - MGP_WSBEiJ_P0023797 Cnksr3 protein_coding protein_coding MGP_WSBEiJ_T0097634.1 MGP_WSBEiJ_G0036297.1 mouse_genomes_project 10 53120536 53120643 - Gm26177 snRNA snRNA MGP_WSBEiJ_T0025012.1 MGP_WSBEiJ_G0016744.1 mouse_genomes_project 10 74460555 74513631 + MGP_WSBEiJ_P0025012 Gnaz protein_coding protein_coding MGP_WSBEiJ_T0025013.1 MGP_WSBEiJ_G0016744.1 mouse_genomes_project 10 74460587 74486938 + Gnaz protein_coding processed_transcript MGP_WSBEiJ_T0025014.1 MGP_WSBEiJ_G0016744.1 mouse_genomes_project 10 74485734 74513622 + MGP_WSBEiJ_P0025014 Gnaz protein_coding protein_coding MGP_WSBEiJ_T0024235.1 MGP_WSBEiJ_G0016543.1 mouse_genomes_project 10 32418799 32425910 + MGP_WSBEiJ_P0024235 Col10a1 protein_coding protein_coding MGP_WSBEiJ_T0025906.1 MGP_WSBEiJ_G0016980.1 mouse_genomes_project 10 83890752 83932946 + MGP_WSBEiJ_P0025906 1500009L16Rik protein_coding protein_coding MGP_WSBEiJ_T0097619.1 MGP_WSBEiJ_G0036282.1 mouse_genomes_project 10 27166829 27166936 + Gm25596 snRNA snRNA MGP_WSBEiJ_T0025723.1 MGP_WSBEiJ_G0016942.1 mouse_genomes_project 10 81355409 81361931 - MGP_WSBEiJ_P0025723 Gipc3 protein_coding protein_coding MGP_WSBEiJ_T0024369.1 MGP_WSBEiJ_G0016584.1 mouse_genomes_project 10 40340146 40448340 - MGP_WSBEiJ_P0024369 protein_coding protein_coding MGP_WSBEiJ_T0024370.1 MGP_WSBEiJ_G0016584.1 mouse_genomes_project 10 40340149 40405846 - protein_coding retained_intron MGP_WSBEiJ_T0024371.1 MGP_WSBEiJ_G0016584.1 mouse_genomes_project 10 40340156 40448291 - MGP_WSBEiJ_P0024371 protein_coding protein_coding MGP_WSBEiJ_T0024372.1 MGP_WSBEiJ_G0016584.1 mouse_genomes_project 10 40341186 40405224 - protein_coding retained_intron MGP_WSBEiJ_T0024373.1 MGP_WSBEiJ_G0016584.1 mouse_genomes_project 10 40341930 40448346 - MGP_WSBEiJ_P0024373 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024374.1 MGP_WSBEiJ_G0016584.1 mouse_genomes_project 10 40415735 40422353 - MGP_WSBEiJ_P0024374 protein_coding protein_coding MGP_WSBEiJ_T0024375.1 MGP_WSBEiJ_G0016584.1 mouse_genomes_project 10 40428978 40448289 - MGP_WSBEiJ_P0024375 protein_coding protein_coding MGP_WSBEiJ_T0024376.1 MGP_WSBEiJ_G0016584.1 mouse_genomes_project 10 40429518 40448291 - MGP_WSBEiJ_P0024376 protein_coding protein_coding MGP_WSBEiJ_T0006001.1 MGP_WSBEiJ_G0005022.1 mouse_genomes_project 10 40032608 40035424 - Gm29095 lincRNA lincRNA MGP_WSBEiJ_T0009432.1 MGP_WSBEiJ_G0007589.1 mouse_genomes_project 10 44380724 44380839 - Gm27410 miRNA miRNA MGP_WSBEiJ_T0025684.1 MGP_WSBEiJ_G0016931.1 mouse_genomes_project 10 81182748 81195684 + MGP_WSBEiJ_P0025684 Dapk3 protein_coding protein_coding MGP_WSBEiJ_T0024229.1 MGP_WSBEiJ_G0016540.1 mouse_genomes_project 10 32308543 32311626 + MGP_WSBEiJ_P0024229 Tspyl1 protein_coding protein_coding MGP_WSBEiJ_T0026740.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130682589 130707211 + Timeless protein_coding retained_intron MGP_WSBEiJ_T0026741.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130682589 130700387 + MGP_WSBEiJ_P0026741 Timeless protein_coding protein_coding MGP_WSBEiJ_T0026742.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130682593 130695954 + MGP_WSBEiJ_P0026742 Timeless protein_coding protein_coding MGP_WSBEiJ_T0026743.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130693336 130707193 + MGP_WSBEiJ_P0026743 Timeless protein_coding protein_coding MGP_WSBEiJ_T0026744.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130694679 130695894 + Timeless protein_coding retained_intron MGP_WSBEiJ_T0026745.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130696617 130697289 + Timeless protein_coding retained_intron MGP_WSBEiJ_T0026746.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130696686 130698208 + Timeless protein_coding processed_transcript MGP_WSBEiJ_T0026747.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130696907 130697974 + Timeless protein_coding retained_intron MGP_WSBEiJ_T0026748.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130701557 130702325 + Timeless protein_coding retained_intron MGP_WSBEiJ_T0026749.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130701612 130707218 + Timeless protein_coding processed_transcript MGP_WSBEiJ_T0026750.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130703490 130704138 + Timeless protein_coding retained_intron MGP_WSBEiJ_T0026751.1 MGP_WSBEiJ_G0017235.1 mouse_genomes_project 10 130703896 130704650 + Timeless protein_coding retained_intron MGP_WSBEiJ_T0024268.1 MGP_WSBEiJ_G0016552.1 mouse_genomes_project 10 37412093 37424823 - MGP_WSBEiJ_P0024268 Wisp3 protein_coding protein_coding MGP_WSBEiJ_T0026132.1 MGP_WSBEiJ_G0017034.1 mouse_genomes_project 10 91655571 91679709 - MGP_WSBEiJ_P0026132 Tmpo protein_coding protein_coding MGP_WSBEiJ_T0026133.1 MGP_WSBEiJ_G0017034.1 mouse_genomes_project 10 91655571 91679709 - MGP_WSBEiJ_P0026133 Tmpo protein_coding protein_coding MGP_WSBEiJ_T0026134.1 MGP_WSBEiJ_G0017034.1 mouse_genomes_project 10 91655571 91679709 - MGP_WSBEiJ_P0026134 Tmpo protein_coding protein_coding MGP_WSBEiJ_T0026135.1 MGP_WSBEiJ_G0017034.1 mouse_genomes_project 10 91655571 91679709 - MGP_WSBEiJ_P0026135 Tmpo protein_coding protein_coding MGP_WSBEiJ_T0026136.1 MGP_WSBEiJ_G0017034.1 mouse_genomes_project 10 91668447 91679709 - MGP_WSBEiJ_P0026136 Tmpo protein_coding protein_coding MGP_WSBEiJ_T0012145.1 MGP_WSBEiJ_G0010275.1 mouse_genomes_project 10 7464309 7465522 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025923.1 MGP_WSBEiJ_G0016987.1 mouse_genomes_project 10 85294348 85299825 - MGP_WSBEiJ_P0025923 Fhl4 protein_coding protein_coding MGP_WSBEiJ_T0024293.1 MGP_WSBEiJ_G0016559.1 mouse_genomes_project 10 38258724 38291731 - MGP_WSBEiJ_P0024293 protein_coding protein_coding MGP_WSBEiJ_T0024294.1 MGP_WSBEiJ_G0016559.1 mouse_genomes_project 10 38268201 38291734 - MGP_WSBEiJ_P0024294 protein_coding protein_coding MGP_WSBEiJ_T0024295.1 MGP_WSBEiJ_G0016559.1 mouse_genomes_project 10 38271179 38291727 - MGP_WSBEiJ_P0024295 protein_coding protein_coding MGP_WSBEiJ_T0024296.1 MGP_WSBEiJ_G0016559.1 mouse_genomes_project 10 38277830 38291728 - MGP_WSBEiJ_P0024296 protein_coding protein_coding MGP_WSBEiJ_T0024297.1 MGP_WSBEiJ_G0016559.1 mouse_genomes_project 10 38278819 38279473 - MGP_WSBEiJ_P0024297 protein_coding protein_coding MGP_WSBEiJ_T0025336.1 MGP_WSBEiJ_G0016842.1 mouse_genomes_project 10 79546464 79554309 + MGP_WSBEiJ_P0025336 Cdc34 protein_coding protein_coding MGP_WSBEiJ_T0025337.1 MGP_WSBEiJ_G0016842.1 mouse_genomes_project 10 79546573 79554309 + MGP_WSBEiJ_P0025337 Cdc34 protein_coding protein_coding MGP_WSBEiJ_T0002963.1 MGP_WSBEiJ_G0002778.1 mouse_genomes_project 10 58465272 58466240 - Gm17059 antisense antisense MGP_WSBEiJ_T0026361.1 MGP_WSBEiJ_G0017110.1 mouse_genomes_project 10 113448434 113464141 + MGP_WSBEiJ_P0026361 Krr1 protein_coding protein_coding MGP_WSBEiJ_T0026362.1 MGP_WSBEiJ_G0017110.1 mouse_genomes_project 10 113448527 113452242 + Krr1 protein_coding retained_intron MGP_WSBEiJ_T0026363.1 MGP_WSBEiJ_G0017110.1 mouse_genomes_project 10 113448545 113462610 + Krr1 protein_coding retained_intron MGP_WSBEiJ_T0026364.1 MGP_WSBEiJ_G0017110.1 mouse_genomes_project 10 113448563 113460223 + MGP_WSBEiJ_P0026364 Krr1 protein_coding protein_coding MGP_WSBEiJ_T0026432.1 MGP_WSBEiJ_G0017134.1 mouse_genomes_project 10 118702125 118751607 - MGP_WSBEiJ_P0026432 Rab3ip protein_coding unknown_likely_coding MGP_WSBEiJ_T0026433.1 MGP_WSBEiJ_G0017134.1 mouse_genomes_project 10 118704653 118751581 - MGP_WSBEiJ_P0026433 Rab3ip protein_coding protein_coding MGP_WSBEiJ_T0024857.1 MGP_WSBEiJ_G0016726.1 mouse_genomes_project 10 67903490 67967244 + MGP_WSBEiJ_P0024857 Tmem26 protein_coding protein_coding MGP_WSBEiJ_T0025618.1 MGP_WSBEiJ_G0016908.1 mouse_genomes_project 10 80769779 80772304 - MGP_WSBEiJ_P0025618 Plekhj1 protein_coding protein_coding MGP_WSBEiJ_T0006047.1 MGP_WSBEiJ_G0005052.1 mouse_genomes_project 10 92702365 92704937 + Gm26700 lincRNA lincRNA MGP_WSBEiJ_T0026324.1 MGP_WSBEiJ_G0017097.1 mouse_genomes_project 10 108779184 108989947 - MGP_WSBEiJ_P0026324 Ptprq protein_coding protein_coding MGP_WSBEiJ_T0026538.1 MGP_WSBEiJ_G0017171.1 mouse_genomes_project 10 123905660 124189003 - MGP_WSBEiJ_P0026538 Srgap1 protein_coding protein_coding MGP_WSBEiJ_T0026539.1 MGP_WSBEiJ_G0017171.1 mouse_genomes_project 10 123905660 124188996 - MGP_WSBEiJ_P0026539 Srgap1 protein_coding protein_coding MGP_WSBEiJ_T0026540.1 MGP_WSBEiJ_G0017171.1 mouse_genomes_project 10 123910898 123932808 - Srgap1 protein_coding processed_transcript MGP_WSBEiJ_T0026541.1 MGP_WSBEiJ_G0017171.1 mouse_genomes_project 10 123932344 123948602 - MGP_WSBEiJ_P0026541 Srgap1 protein_coding protein_coding MGP_WSBEiJ_T0026542.1 MGP_WSBEiJ_G0017171.1 mouse_genomes_project 10 124026378 124189003 - Srgap1 protein_coding retained_intron MGP_WSBEiJ_T0026267.1 MGP_WSBEiJ_G0017080.1 mouse_genomes_project 10 101421797 101506567 + MGP_WSBEiJ_P0026267 Cep290 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026268.1 MGP_WSBEiJ_G0017080.1 mouse_genomes_project 10 101422466 101507903 + MGP_WSBEiJ_P0026268 Cep290 protein_coding protein_coding MGP_WSBEiJ_T0026868.1 MGP_WSBEiJ_G0017294.1 mouse_genomes_project 10 132068134 132069204 + MGP_WSBEiJ_P0026868 protein_coding protein_coding MGP_WSBEiJ_T0006073.1 MGP_WSBEiJ_G0005069.1 mouse_genomes_project 10 129542630 129550025 + F420014N23Rik lincRNA lincRNA MGP_WSBEiJ_T0025340.1 MGP_WSBEiJ_G0016844.1 mouse_genomes_project 10 79572634 79580208 + MGP_WSBEiJ_P0025340 Bsg protein_coding protein_coding MGP_WSBEiJ_T0025341.1 MGP_WSBEiJ_G0016844.1 mouse_genomes_project 10 79572760 79580126 + MGP_WSBEiJ_P0025341 Bsg protein_coding protein_coding MGP_WSBEiJ_T0025342.1 MGP_WSBEiJ_G0016844.1 mouse_genomes_project 10 79572768 79578967 + Bsg protein_coding processed_transcript MGP_WSBEiJ_T0025343.1 MGP_WSBEiJ_G0016844.1 mouse_genomes_project 10 79578355 79579941 + Bsg protein_coding retained_intron MGP_WSBEiJ_T0026673.1 MGP_WSBEiJ_G0017212.1 mouse_genomes_project 10 130025629 130048191 + MGP_WSBEiJ_P0026673 Stat6 protein_coding protein_coding MGP_WSBEiJ_T0026674.1 MGP_WSBEiJ_G0017212.1 mouse_genomes_project 10 130025645 130033434 + MGP_WSBEiJ_P0026674 Stat6 protein_coding protein_coding MGP_WSBEiJ_T0026675.1 MGP_WSBEiJ_G0017212.1 mouse_genomes_project 10 130035754 130039848 + Stat6 protein_coding retained_intron MGP_WSBEiJ_T0026676.1 MGP_WSBEiJ_G0017212.1 mouse_genomes_project 10 130042411 130043538 + Stat6 protein_coding retained_intron MGP_WSBEiJ_T0026677.1 MGP_WSBEiJ_G0017212.1 mouse_genomes_project 10 130046633 130047421 + Stat6 protein_coding retained_intron MGP_WSBEiJ_T0025709.1 MGP_WSBEiJ_G0016937.1 mouse_genomes_project 10 81279089 81285952 + MGP_WSBEiJ_P0025709 Apba3 protein_coding protein_coding MGP_WSBEiJ_T0025070.1 MGP_WSBEiJ_G0016756.1 mouse_genomes_project 10 75190707 75313610 - MGP_WSBEiJ_P0025070 Cabin1 protein_coding protein_coding MGP_WSBEiJ_T0025124.1 MGP_WSBEiJ_G0016776.1 mouse_genomes_project 10 76075186 76084416 + MGP_WSBEiJ_P0025124 2610028H24Rik protein_coding protein_coding MGP_WSBEiJ_T0025564.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343114 80368415 - MGP_WSBEiJ_P0025564 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025565.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343114 80367200 - MGP_WSBEiJ_P0025565 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025566.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343147 80368415 - MGP_WSBEiJ_P0025566 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025567.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343147 80368411 - MGP_WSBEiJ_P0025567 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025568.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343208 80367184 - MGP_WSBEiJ_P0025568 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025569.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343208 80367184 - MGP_WSBEiJ_P0025569 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025570.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343220 80364577 - MGP_WSBEiJ_P0025570 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025571.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343226 80367198 - MGP_WSBEiJ_P0025571 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025572.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343226 80367198 - MGP_WSBEiJ_P0025572 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025573.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343654 80364550 - MGP_WSBEiJ_P0025573 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025574.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80343654 80364647 - MGP_WSBEiJ_P0025574 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0025575.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80346227 80349031 - Tcf3 protein_coding processed_transcript MGP_WSBEiJ_T0025576.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80348786 80349832 - Tcf3 protein_coding retained_intron MGP_WSBEiJ_T0025577.1 MGP_WSBEiJ_G0016893.1 mouse_genomes_project 10 80353626 80355404 - MGP_WSBEiJ_P0025577 Tcf3 protein_coding protein_coding MGP_WSBEiJ_T0024566.1 MGP_WSBEiJ_G0016653.1 mouse_genomes_project 10 58055126 58075797 - MGP_WSBEiJ_P0024566 Oit3 protein_coding protein_coding MGP_WSBEiJ_T0024567.1 MGP_WSBEiJ_G0016653.1 mouse_genomes_project 10 58061086 58063866 - Oit3 protein_coding retained_intron MGP_WSBEiJ_T0026496.1 MGP_WSBEiJ_G0017155.1 mouse_genomes_project 10 122122712 122154526 - MGP_WSBEiJ_P0026496 Helb protein_coding protein_coding MGP_WSBEiJ_T0026497.1 MGP_WSBEiJ_G0017155.1 mouse_genomes_project 10 122123780 122132609 - Helb protein_coding retained_intron MGP_WSBEiJ_T0026498.1 MGP_WSBEiJ_G0017155.1 mouse_genomes_project 10 122123842 122154404 - MGP_WSBEiJ_P0026498 Helb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025268.1 MGP_WSBEiJ_G0016810.1 mouse_genomes_project 10 77926638 77934423 - MGP_WSBEiJ_P0025268 D10Jhu81e protein_coding protein_coding MGP_WSBEiJ_T0026233.1 MGP_WSBEiJ_G0017060.1 mouse_genomes_project 10 96255996 96271867 - MGP_WSBEiJ_P0026233 Nudt4 protein_coding protein_coding MGP_WSBEiJ_T0025883.1 MGP_WSBEiJ_G0016976.1 mouse_genomes_project 10 83546536 83554962 + MGP_WSBEiJ_P0025883 D10Wsu102e protein_coding protein_coding MGP_WSBEiJ_T0002999.1 MGP_WSBEiJ_G0002806.1 mouse_genomes_project 10 83302025 83304914 - 1700025N21Rik antisense antisense MGP_WSBEiJ_T0024799.1 MGP_WSBEiJ_G0016709.1 mouse_genomes_project 10 62064829 62156807 - MGP_WSBEiJ_P0024799 Mypn protein_coding protein_coding MGP_WSBEiJ_T0025542.1 MGP_WSBEiJ_G0016888.1 mouse_genomes_project 10 80262953 80263929 - Adamtsl5 protein_coding processed_transcript MGP_WSBEiJ_T0025543.1 MGP_WSBEiJ_G0016888.1 mouse_genomes_project 10 80263636 80272956 - Adamtsl5 protein_coding retained_intron MGP_WSBEiJ_T0025544.1 MGP_WSBEiJ_G0016888.1 mouse_genomes_project 10 80263664 80270690 - Adamtsl5 protein_coding retained_intron MGP_WSBEiJ_T0025545.1 MGP_WSBEiJ_G0016888.1 mouse_genomes_project 10 80264684 80272956 - Adamtsl5 protein_coding retained_intron MGP_WSBEiJ_T0025546.1 MGP_WSBEiJ_G0016888.1 mouse_genomes_project 10 80264684 80272956 - MGP_WSBEiJ_P0025546 Adamtsl5 protein_coding protein_coding MGP_WSBEiJ_T0025547.1 MGP_WSBEiJ_G0016888.1 mouse_genomes_project 10 80266582 80272956 - MGP_WSBEiJ_P0025547 Adamtsl5 protein_coding protein_coding MGP_WSBEiJ_T0025548.1 MGP_WSBEiJ_G0016888.1 mouse_genomes_project 10 80266849 80269809 - Adamtsl5 protein_coding processed_transcript MGP_WSBEiJ_T0023996.1 MGP_WSBEiJ_G0016445.1 mouse_genomes_project 10 15971582 16144040 - MGP_WSBEiJ_P0023996 Arfgef3 protein_coding protein_coding MGP_WSBEiJ_T0025093.1 MGP_WSBEiJ_G0016766.1 mouse_genomes_project 10 75498149 75498921 - MGP_WSBEiJ_P0025093 Mmp11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025094.1 MGP_WSBEiJ_G0016766.1 mouse_genomes_project 10 75498149 75507429 - MGP_WSBEiJ_P0025094 Mmp11 protein_coding protein_coding MGP_WSBEiJ_T0025095.1 MGP_WSBEiJ_G0016766.1 mouse_genomes_project 10 75498149 75507456 - MGP_WSBEiJ_P0025095 Mmp11 protein_coding protein_coding MGP_WSBEiJ_T0025096.1 MGP_WSBEiJ_G0016766.1 mouse_genomes_project 10 75498150 75501343 - MGP_WSBEiJ_P0025096 Mmp11 protein_coding protein_coding MGP_WSBEiJ_T0025097.1 MGP_WSBEiJ_G0016766.1 mouse_genomes_project 10 75501693 75502624 - Mmp11 protein_coding retained_intron MGP_WSBEiJ_T0026660.1 MGP_WSBEiJ_G0017208.1 mouse_genomes_project 10 129890661 129892864 + MGP_WSBEiJ_P0026660 Ndufa4l2 protein_coding protein_coding MGP_WSBEiJ_T0025426.1 MGP_WSBEiJ_G0016866.1 mouse_genomes_project 10 79877135 79884569 + MGP_WSBEiJ_P0025426 Cnn2 protein_coding protein_coding MGP_WSBEiJ_T0025427.1 MGP_WSBEiJ_G0016866.1 mouse_genomes_project 10 79877174 79883187 + MGP_WSBEiJ_P0025427 Cnn2 protein_coding protein_coding MGP_WSBEiJ_T0096759.1 MGP_WSBEiJ_G0035440.1 mouse_genomes_project 10 72565566 72566038 + pseudogene pseudogene MGP_WSBEiJ_T0097666.1 MGP_WSBEiJ_G0036329.1 mouse_genomes_project 10 125597008 125597192 + Gm22958 snRNA snRNA MGP_WSBEiJ_T0023981.1 MGP_WSBEiJ_G0016442.1 mouse_genomes_project 10 15577971 15598485 - MGP_WSBEiJ_P0023981 Ccdc28a protein_coding protein_coding MGP_WSBEiJ_T0023982.1 MGP_WSBEiJ_G0016442.1 mouse_genomes_project 10 15577977 15591785 - MGP_WSBEiJ_P0023982 Ccdc28a protein_coding protein_coding MGP_WSBEiJ_T0023983.1 MGP_WSBEiJ_G0016442.1 mouse_genomes_project 10 15578070 15580631 - Ccdc28a protein_coding retained_intron MGP_WSBEiJ_T0023984.1 MGP_WSBEiJ_G0016442.1 mouse_genomes_project 10 15578353 15583912 - MGP_WSBEiJ_P0023984 Ccdc28a protein_coding protein_coding MGP_WSBEiJ_T0023985.1 MGP_WSBEiJ_G0016442.1 mouse_genomes_project 10 15578373 15598487 - MGP_WSBEiJ_P0023985 Ccdc28a protein_coding protein_coding MGP_WSBEiJ_T0023986.1 MGP_WSBEiJ_G0016442.1 mouse_genomes_project 10 15581079 15598467 - MGP_WSBEiJ_P0023986 Ccdc28a protein_coding protein_coding MGP_WSBEiJ_T0026766.1 MGP_WSBEiJ_G0017245.1 mouse_genomes_project 10 130861633 130866923 - MGP_WSBEiJ_P0026766 Slc39a5 protein_coding protein_coding MGP_WSBEiJ_T0026767.1 MGP_WSBEiJ_G0017245.1 mouse_genomes_project 10 130861633 130866163 - MGP_WSBEiJ_P0026767 Slc39a5 protein_coding protein_coding MGP_WSBEiJ_T0025358.1 MGP_WSBEiJ_G0016847.1 mouse_genomes_project 10 79623416 79625259 + MGP_WSBEiJ_P0025358 Fgf22 protein_coding protein_coding MGP_WSBEiJ_T0024817.1 MGP_WSBEiJ_G0016715.1 mouse_genomes_project 10 62902768 63074171 - MGP_WSBEiJ_P0024817 Lrrtm3 protein_coding protein_coding MGP_WSBEiJ_T0024818.1 MGP_WSBEiJ_G0016715.1 mouse_genomes_project 10 62904186 63074174 - Lrrtm3 protein_coding processed_transcript MGP_WSBEiJ_T0024819.1 MGP_WSBEiJ_G0016715.1 mouse_genomes_project 10 63071390 63074144 - Lrrtm3 protein_coding retained_intron MGP_WSBEiJ_T0024820.1 MGP_WSBEiJ_G0016715.1 mouse_genomes_project 10 63072948 63074147 - MGP_WSBEiJ_P0024820 Lrrtm3 protein_coding protein_coding MGP_WSBEiJ_T0025633.1 MGP_WSBEiJ_G0016916.1 mouse_genomes_project 10 80862823 80882352 + MGP_WSBEiJ_P0025633 Tmprss9 protein_coding protein_coding MGP_WSBEiJ_T0098833.1 MGP_WSBEiJ_G0037496.1 mouse_genomes_project 10 9496517 9496727 + Gm25139 snoRNA snoRNA MGP_WSBEiJ_T0098869.1 MGP_WSBEiJ_G0037532.1 mouse_genomes_project 10 98583590 98583718 - Gm25658 snoRNA snoRNA MGP_WSBEiJ_T0097623.1 MGP_WSBEiJ_G0036286.1 mouse_genomes_project 10 36879408 36879515 - Gm22911 snRNA snRNA MGP_WSBEiJ_T0025632.1 MGP_WSBEiJ_G0016915.1 mouse_genomes_project 10 80835015 80851806 + MGP_WSBEiJ_P0025632 Sppl2b protein_coding protein_coding MGP_WSBEiJ_T0009452.1 MGP_WSBEiJ_G0007609.1 mouse_genomes_project 10 79737854 79737920 + Mir6910 miRNA miRNA MGP_WSBEiJ_T0024042.1 MGP_WSBEiJ_G0016461.1 mouse_genomes_project 10 17832032 18175984 - MGP_WSBEiJ_P0024042 Pde7b protein_coding protein_coding MGP_WSBEiJ_T0024043.1 MGP_WSBEiJ_G0016461.1 mouse_genomes_project 10 17832956 17996808 - MGP_WSBEiJ_P0024043 Pde7b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024044.1 MGP_WSBEiJ_G0016461.1 mouse_genomes_project 10 17834446 18175607 - MGP_WSBEiJ_P0024044 Pde7b protein_coding protein_coding MGP_WSBEiJ_T0024045.1 MGP_WSBEiJ_G0016461.1 mouse_genomes_project 10 17834446 17996808 - MGP_WSBEiJ_P0024045 Pde7b protein_coding protein_coding MGP_WSBEiJ_T0024046.1 MGP_WSBEiJ_G0016461.1 mouse_genomes_project 10 17841614 17996950 - MGP_WSBEiJ_P0024046 Pde7b protein_coding protein_coding MGP_WSBEiJ_T0024047.1 MGP_WSBEiJ_G0016461.1 mouse_genomes_project 10 18069514 18175938 - Pde7b protein_coding retained_intron MGP_WSBEiJ_T0025970.1 MGP_WSBEiJ_G0017002.1 mouse_genomes_project 10 86956195 86968046 - Hsp90b1 protein_coding retained_intron MGP_WSBEiJ_T0025971.1 MGP_WSBEiJ_G0017002.1 mouse_genomes_project 10 86957068 86973146 - MGP_WSBEiJ_P0025971 Hsp90b1 protein_coding protein_coding MGP_WSBEiJ_T0025972.1 MGP_WSBEiJ_G0017002.1 mouse_genomes_project 10 86958396 86964521 - MGP_WSBEiJ_P0025972 Hsp90b1 protein_coding protein_coding MGP_WSBEiJ_T0025973.1 MGP_WSBEiJ_G0017002.1 mouse_genomes_project 10 86960016 86961717 - Hsp90b1 protein_coding retained_intron MGP_WSBEiJ_T0025974.1 MGP_WSBEiJ_G0017002.1 mouse_genomes_project 10 86968023 86970730 - Hsp90b1 protein_coding retained_intron MGP_WSBEiJ_T0009462.1 MGP_WSBEiJ_G0007619.1 mouse_genomes_project 10 81544790 81544887 + Gm25595 miRNA miRNA MGP_WSBEiJ_T0002970.1 MGP_WSBEiJ_G0002783.1 mouse_genomes_project 10 62004473 62006344 - Gm16143 antisense antisense MGP_WSBEiJ_T0026870.1 MGP_WSBEiJ_G0017296.1 mouse_genomes_project 10 132093266 132094205 + MGP_WSBEiJ_P0026870 Olfr791 protein_coding protein_coding MGP_WSBEiJ_T0024772.1 MGP_WSBEiJ_G0016704.1 mouse_genomes_project 10 61881836 61913435 + MGP_WSBEiJ_P0024772 Dna2 protein_coding protein_coding MGP_WSBEiJ_T0024773.1 MGP_WSBEiJ_G0016704.1 mouse_genomes_project 10 61881885 61913021 + MGP_WSBEiJ_P0024773 Dna2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024774.1 MGP_WSBEiJ_G0016704.1 mouse_genomes_project 10 61881890 61886424 + Dna2 protein_coding retained_intron MGP_WSBEiJ_T0024775.1 MGP_WSBEiJ_G0016704.1 mouse_genomes_project 10 61881920 61904416 + Dna2 protein_coding retained_intron MGP_WSBEiJ_T0024776.1 MGP_WSBEiJ_G0016704.1 mouse_genomes_project 10 61903970 61913434 + Dna2 protein_coding retained_intron MGP_WSBEiJ_T0024777.1 MGP_WSBEiJ_G0016704.1 mouse_genomes_project 10 61904265 61913429 + Dna2 protein_coding retained_intron MGP_WSBEiJ_T0026634.1 MGP_WSBEiJ_G0017205.1 mouse_genomes_project 10 129717091 129732253 - MGP_WSBEiJ_P0026634 Inhbc protein_coding protein_coding MGP_WSBEiJ_T0006074.1 MGP_WSBEiJ_G0005070.1 mouse_genomes_project 10 130681094 130683269 - Gm26847 lincRNA lincRNA MGP_WSBEiJ_T0098862.1 MGP_WSBEiJ_G0037525.1 mouse_genomes_project 10 71962984 71963117 + Gm24984 snoRNA snoRNA MGP_WSBEiJ_T0003014.1 MGP_WSBEiJ_G0002818.1 mouse_genomes_project 10 112197622 112301323 - 1700020G17Rik antisense antisense MGP_WSBEiJ_T0003015.1 MGP_WSBEiJ_G0002818.1 mouse_genomes_project 10 112214190 112301353 - 1700020G17Rik antisense antisense MGP_WSBEiJ_T0003016.1 MGP_WSBEiJ_G0002818.1 mouse_genomes_project 10 112226853 112301385 - 1700020G17Rik antisense antisense MGP_WSBEiJ_T0003017.1 MGP_WSBEiJ_G0002818.1 mouse_genomes_project 10 112248206 112301372 - 1700020G17Rik antisense antisense MGP_WSBEiJ_T0024367.1 MGP_WSBEiJ_G0016583.1 mouse_genomes_project 10 40238602 40333643 + MGP_WSBEiJ_P0024367 Sesn1 protein_coding protein_coding MGP_WSBEiJ_T0024368.1 MGP_WSBEiJ_G0016583.1 mouse_genomes_project 10 40310579 40333643 + MGP_WSBEiJ_P0024368 Sesn1 protein_coding protein_coding MGP_WSBEiJ_T0097616.1 MGP_WSBEiJ_G0036279.1 mouse_genomes_project 10 14410103 14410200 + Gm25382 snRNA snRNA MGP_WSBEiJ_T0026155.1 MGP_WSBEiJ_G0017039.1 mouse_genomes_project 10 94046757 94083345 + MGP_WSBEiJ_P0026155 Lta4h protein_coding protein_coding MGP_WSBEiJ_T0026156.1 MGP_WSBEiJ_G0017039.1 mouse_genomes_project 10 94046871 94083326 + MGP_WSBEiJ_P0026156 Lta4h protein_coding unknown_likely_coding MGP_WSBEiJ_T0024667.1 MGP_WSBEiJ_G0016675.1 mouse_genomes_project 10 60215257 60224281 + MGP_WSBEiJ_P0024667 Nodal protein_coding protein_coding MGP_WSBEiJ_T0026635.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129743871 129816872 + MGP_WSBEiJ_P0026635 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026636.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129744206 129874795 + MGP_WSBEiJ_P0026636 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026637.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129758940 129874818 + MGP_WSBEiJ_P0026637 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026638.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129758940 129874818 + MGP_WSBEiJ_P0026638 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026639.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129792245 129825387 + MGP_WSBEiJ_P0026639 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026640.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129792774 129874784 + MGP_WSBEiJ_P0026640 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026641.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129793031 129874466 + MGP_WSBEiJ_P0026641 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026642.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129793139 129826168 + MGP_WSBEiJ_P0026642 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026643.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129816791 129874819 + MGP_WSBEiJ_P0026643 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026644.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129816791 129874144 + MGP_WSBEiJ_P0026644 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026645.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129816791 129874802 + MGP_WSBEiJ_P0026645 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026646.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129816791 129874144 + MGP_WSBEiJ_P0026646 R3hdm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026647.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129833655 129839364 + MGP_WSBEiJ_P0026647 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026648.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129833681 129839496 + R3hdm2 protein_coding retained_intron MGP_WSBEiJ_T0026649.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129833685 129874818 + MGP_WSBEiJ_P0026649 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026650.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129833725 129858601 + R3hdm2 protein_coding processed_transcript MGP_WSBEiJ_T0026651.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129855761 129858992 + R3hdm2 protein_coding retained_intron MGP_WSBEiJ_T0026652.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129859738 129867204 + R3hdm2 protein_coding retained_intron MGP_WSBEiJ_T0026653.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129859929 129870580 + MGP_WSBEiJ_P0026653 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026654.1 MGP_WSBEiJ_G0017206.1 mouse_genomes_project 10 129867136 129874802 + MGP_WSBEiJ_P0026654 R3hdm2 protein_coding protein_coding MGP_WSBEiJ_T0026384.1 MGP_WSBEiJ_G0017120.1 mouse_genomes_project 10 116857962 116914685 - MGP_WSBEiJ_P0026384 Tbc1d15 protein_coding protein_coding MGP_WSBEiJ_T0024184.1 MGP_WSBEiJ_G0016515.1 mouse_genomes_project 10 27161377 27179652 - MGP_WSBEiJ_P0024184 Rnf146 protein_coding protein_coding MGP_WSBEiJ_T0024185.1 MGP_WSBEiJ_G0016515.1 mouse_genomes_project 10 27163446 27179652 - MGP_WSBEiJ_P0024185 Rnf146 protein_coding protein_coding MGP_WSBEiJ_T0024186.1 MGP_WSBEiJ_G0016515.1 mouse_genomes_project 10 27163451 27179250 - MGP_WSBEiJ_P0024186 Rnf146 protein_coding protein_coding MGP_WSBEiJ_T0024187.1 MGP_WSBEiJ_G0016515.1 mouse_genomes_project 10 27163934 27174935 - MGP_WSBEiJ_P0024187 Rnf146 protein_coding protein_coding MGP_WSBEiJ_T0024188.1 MGP_WSBEiJ_G0016515.1 mouse_genomes_project 10 27164495 27179233 - MGP_WSBEiJ_P0024188 Rnf146 protein_coding protein_coding MGP_WSBEiJ_T0097262.1 MGP_WSBEiJ_G0035942.1 mouse_genomes_project 10 122900226 122901344 - Gm15961 sense_intronic sense_intronic MGP_WSBEiJ_T0025259.1 MGP_WSBEiJ_G0016808.1 mouse_genomes_project 10 77777189 77781129 + Dnmt3l protein_coding processed_transcript MGP_WSBEiJ_T0025260.1 MGP_WSBEiJ_G0016808.1 mouse_genomes_project 10 77777529 77801730 + MGP_WSBEiJ_P0025260 Dnmt3l protein_coding protein_coding MGP_WSBEiJ_T0025261.1 MGP_WSBEiJ_G0016808.1 mouse_genomes_project 10 77786479 77801730 + MGP_WSBEiJ_P0025261 Dnmt3l protein_coding protein_coding MGP_WSBEiJ_T0025262.1 MGP_WSBEiJ_G0016808.1 mouse_genomes_project 10 77786596 77801724 + MGP_WSBEiJ_P0025262 Dnmt3l protein_coding protein_coding MGP_WSBEiJ_T0025263.1 MGP_WSBEiJ_G0016808.1 mouse_genomes_project 10 77791480 77793998 + Dnmt3l protein_coding retained_intron MGP_WSBEiJ_T0025264.1 MGP_WSBEiJ_G0016808.1 mouse_genomes_project 10 77791979 77801723 + MGP_WSBEiJ_P0025264 Dnmt3l protein_coding protein_coding MGP_WSBEiJ_T0025265.1 MGP_WSBEiJ_G0016808.1 mouse_genomes_project 10 77791979 77801723 + MGP_WSBEiJ_P0025265 Dnmt3l protein_coding protein_coding MGP_WSBEiJ_T0025266.1 MGP_WSBEiJ_G0016808.1 mouse_genomes_project 10 77791979 77801723 + MGP_WSBEiJ_P0025266 Dnmt3l protein_coding protein_coding MGP_WSBEiJ_T0026814.1 MGP_WSBEiJ_G0017261.1 mouse_genomes_project 10 131200145 131215794 + MGP_WSBEiJ_P0026814 Pmel protein_coding protein_coding MGP_WSBEiJ_T0025890.1 MGP_WSBEiJ_G0016978.1 mouse_genomes_project 10 83708876 83763368 + MGP_WSBEiJ_P0025890 A230046K03Rik protein_coding protein_coding MGP_WSBEiJ_T0025891.1 MGP_WSBEiJ_G0016978.1 mouse_genomes_project 10 83708977 83763378 + MGP_WSBEiJ_P0025891 A230046K03Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0026388.1 MGP_WSBEiJ_G0017124.1 mouse_genomes_project 10 117065406 117114274 + MGP_WSBEiJ_P0026388 Zfc3h1 protein_coding protein_coding MGP_WSBEiJ_T0026389.1 MGP_WSBEiJ_G0017124.1 mouse_genomes_project 10 117108884 117114273 + Zfc3h1 protein_coding retained_intron MGP_WSBEiJ_T0026390.1 MGP_WSBEiJ_G0017124.1 mouse_genomes_project 10 117110078 117112377 + Zfc3h1 protein_coding retained_intron MGP_WSBEiJ_T0026391.1 MGP_WSBEiJ_G0017124.1 mouse_genomes_project 10 117112578 117113262 + Zfc3h1 protein_coding retained_intron MGP_WSBEiJ_T0025639.1 MGP_WSBEiJ_G0016920.1 mouse_genomes_project 10 80933132 81004065 - MGP_WSBEiJ_P0025639 Gng7 protein_coding protein_coding MGP_WSBEiJ_T0025640.1 MGP_WSBEiJ_G0016920.1 mouse_genomes_project 10 80933132 80990497 - MGP_WSBEiJ_P0025640 Gng7 protein_coding protein_coding MGP_WSBEiJ_T0025641.1 MGP_WSBEiJ_G0016920.1 mouse_genomes_project 10 80933132 81004045 - MGP_WSBEiJ_P0025641 Gng7 protein_coding protein_coding MGP_WSBEiJ_T0025642.1 MGP_WSBEiJ_G0016920.1 mouse_genomes_project 10 80933137 80990510 - MGP_WSBEiJ_P0025642 Gng7 protein_coding protein_coding MGP_WSBEiJ_T0025643.1 MGP_WSBEiJ_G0016920.1 mouse_genomes_project 10 80935713 80987317 - MGP_WSBEiJ_P0025643 Gng7 protein_coding protein_coding MGP_WSBEiJ_T0025644.1 MGP_WSBEiJ_G0016920.1 mouse_genomes_project 10 80936238 81004033 - MGP_WSBEiJ_P0025644 Gng7 protein_coding protein_coding MGP_WSBEiJ_T0012187.1 MGP_WSBEiJ_G0010317.1 mouse_genomes_project 10 82374559 82375189 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024099.1 MGP_WSBEiJ_G0016482.1 mouse_genomes_project 10 21556431 21557463 + MGP_WSBEiJ_P0024099 Taar3 protein_coding protein_coding MGP_WSBEiJ_T0097632.1 MGP_WSBEiJ_G0036295.1 mouse_genomes_project 10 49903123 49903230 + Gm26257 snRNA snRNA MGP_WSBEiJ_T0024927.1 MGP_WSBEiJ_G0016732.1 mouse_genomes_project 10 69511978 69559021 + MGP_WSBEiJ_P0024927 Slc16a9 protein_coding protein_coding MGP_WSBEiJ_T0024928.1 MGP_WSBEiJ_G0016732.1 mouse_genomes_project 10 69537911 69557034 + Slc16a9 protein_coding retained_intron MGP_WSBEiJ_T0026514.1 MGP_WSBEiJ_G0017159.1 mouse_genomes_project 10 122417200 122541769 - MGP_WSBEiJ_P0026514 Hmga2 protein_coding protein_coding MGP_WSBEiJ_T0026515.1 MGP_WSBEiJ_G0017159.1 mouse_genomes_project 10 122535588 122541592 - Hmga2 protein_coding retained_intron MGP_WSBEiJ_T0097639.1 MGP_WSBEiJ_G0036302.1 mouse_genomes_project 10 63301631 63301739 - Gm23854 snRNA snRNA MGP_WSBEiJ_T0026351.1 MGP_WSBEiJ_G0017104.1 mouse_genomes_project 10 112325672 112344978 + MGP_WSBEiJ_P0026351 Csrp2 protein_coding protein_coding MGP_WSBEiJ_T0026211.1 MGP_WSBEiJ_G0017053.1 mouse_genomes_project 10 94942904 95070081 + Tmcc3 protein_coding retained_intron MGP_WSBEiJ_T0026212.1 MGP_WSBEiJ_G0017053.1 mouse_genomes_project 10 94942972 95227084 + MGP_WSBEiJ_P0026212 Tmcc3 protein_coding protein_coding MGP_WSBEiJ_T0026213.1 MGP_WSBEiJ_G0017053.1 mouse_genomes_project 10 94943085 95008359 + Tmcc3 protein_coding processed_transcript MGP_WSBEiJ_T0026214.1 MGP_WSBEiJ_G0017053.1 mouse_genomes_project 10 95157474 95239253 + MGP_WSBEiJ_P0026214 Tmcc3 protein_coding protein_coding MGP_WSBEiJ_T0026215.1 MGP_WSBEiJ_G0017053.1 mouse_genomes_project 10 95192849 95227210 + MGP_WSBEiJ_P0026215 Tmcc3 protein_coding protein_coding MGP_WSBEiJ_T0026216.1 MGP_WSBEiJ_G0017053.1 mouse_genomes_project 10 95198264 95226955 + MGP_WSBEiJ_P0026216 Tmcc3 protein_coding protein_coding MGP_WSBEiJ_T0024433.1 MGP_WSBEiJ_G0016602.1 mouse_genomes_project 10 42811323 42909887 + MGP_WSBEiJ_P0024433 Atg5 protein_coding protein_coding MGP_WSBEiJ_T0097656.1 MGP_WSBEiJ_G0036319.1 mouse_genomes_project 10 93049101 93049163 + Gm25884 snRNA snRNA MGP_WSBEiJ_T0026279.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 102696483 103063886 + Mgat4c protein_coding retained_intron MGP_WSBEiJ_T0026280.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 102696483 103460266 + MGP_WSBEiJ_P0026280 Mgat4c protein_coding protein_coding MGP_WSBEiJ_T0026281.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 102696637 103445641 + Mgat4c protein_coding processed_transcript MGP_WSBEiJ_T0026282.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 102696637 103446260 + MGP_WSBEiJ_P0026282 Mgat4c protein_coding protein_coding MGP_WSBEiJ_T0026283.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 102696742 103453927 + MGP_WSBEiJ_P0026283 Mgat4c protein_coding protein_coding MGP_WSBEiJ_T0026284.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 103219002 103457176 + MGP_WSBEiJ_P0026284 Mgat4c protein_coding protein_coding MGP_WSBEiJ_T0026285.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 103219002 103460269 + MGP_WSBEiJ_P0026285 Mgat4c protein_coding protein_coding MGP_WSBEiJ_T0026286.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 103219022 103339612 + Mgat4c protein_coding processed_transcript MGP_WSBEiJ_T0026287.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 103219033 103446187 + MGP_WSBEiJ_P0026287 Mgat4c protein_coding protein_coding MGP_WSBEiJ_T0026288.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 103219049 103339613 + Mgat4c protein_coding processed_transcript MGP_WSBEiJ_T0026289.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 103219223 103460269 + MGP_WSBEiJ_P0026289 Mgat4c protein_coding protein_coding MGP_WSBEiJ_T0026290.1 MGP_WSBEiJ_G0017083.1 mouse_genomes_project 10 103442451 103459113 + MGP_WSBEiJ_P0026290 Mgat4c protein_coding protein_coding MGP_WSBEiJ_T0002940.1 MGP_WSBEiJ_G0002760.1 mouse_genomes_project 10 8353630 8354330 - Gm16577 antisense antisense MGP_WSBEiJ_T0024132.1 MGP_WSBEiJ_G0016499.1 mouse_genomes_project 10 22864282 22936774 - Akap7 protein_coding processed_transcript MGP_WSBEiJ_T0024133.1 MGP_WSBEiJ_G0016499.1 mouse_genomes_project 10 22864282 22897168 - MGP_WSBEiJ_P0024133 Akap7 protein_coding protein_coding MGP_WSBEiJ_T0024134.1 MGP_WSBEiJ_G0016499.1 mouse_genomes_project 10 22865310 22999258 - MGP_WSBEiJ_P0024134 Akap7 protein_coding protein_coding MGP_WSBEiJ_T0024135.1 MGP_WSBEiJ_G0016499.1 mouse_genomes_project 10 22967163 22996193 - MGP_WSBEiJ_P0024135 Akap7 protein_coding protein_coding MGP_WSBEiJ_T0024136.1 MGP_WSBEiJ_G0016499.1 mouse_genomes_project 10 22979492 22999201 - MGP_WSBEiJ_P0024136 Akap7 protein_coding protein_coding MGP_WSBEiJ_T0024137.1 MGP_WSBEiJ_G0016499.1 mouse_genomes_project 10 22984058 22997165 - MGP_WSBEiJ_P0024137 Akap7 protein_coding protein_coding MGP_WSBEiJ_T0024138.1 MGP_WSBEiJ_G0016499.1 mouse_genomes_project 10 22984159 23007665 - MGP_WSBEiJ_P0024138 Akap7 protein_coding protein_coding MGP_WSBEiJ_T0026655.1 MGP_WSBEiJ_G0017207.1 mouse_genomes_project 10 129877157 129884551 + MGP_WSBEiJ_P0026655 Stac3 protein_coding protein_coding MGP_WSBEiJ_T0026656.1 MGP_WSBEiJ_G0017207.1 mouse_genomes_project 10 129877165 129878310 + MGP_WSBEiJ_P0026656 Stac3 protein_coding protein_coding MGP_WSBEiJ_T0026657.1 MGP_WSBEiJ_G0017207.1 mouse_genomes_project 10 129877188 129884543 + MGP_WSBEiJ_P0026657 Stac3 protein_coding protein_coding MGP_WSBEiJ_T0026658.1 MGP_WSBEiJ_G0017207.1 mouse_genomes_project 10 129879962 129883216 + Stac3 protein_coding retained_intron MGP_WSBEiJ_T0026659.1 MGP_WSBEiJ_G0017207.1 mouse_genomes_project 10 129882952 129883720 + Stac3 protein_coding retained_intron MGP_WSBEiJ_T0024152.1 MGP_WSBEiJ_G0016506.1 mouse_genomes_project 10 24498934 24612772 + MGP_WSBEiJ_P0024152 Arhgap18 protein_coding protein_coding MGP_WSBEiJ_T0024153.1 MGP_WSBEiJ_G0016506.1 mouse_genomes_project 10 24518902 24674148 + MGP_WSBEiJ_P0024153 Arhgap18 protein_coding protein_coding MGP_WSBEiJ_T0024154.1 MGP_WSBEiJ_G0016506.1 mouse_genomes_project 10 24573004 24601242 + MGP_WSBEiJ_P0024154 Arhgap18 protein_coding protein_coding MGP_WSBEiJ_T0024155.1 MGP_WSBEiJ_G0016506.1 mouse_genomes_project 10 24615441 24673958 + Arhgap18 protein_coding processed_transcript MGP_WSBEiJ_T0003032.1 MGP_WSBEiJ_G0002828.1 mouse_genomes_project 10 122996980 122999689 + Gm4473 antisense antisense MGP_WSBEiJ_T0024222.1 MGP_WSBEiJ_G0016534.1 mouse_genomes_project 10 32005394 32031522 - MGP_WSBEiJ_P0024222 Rwdd1 protein_coding protein_coding MGP_WSBEiJ_T0024223.1 MGP_WSBEiJ_G0016534.1 mouse_genomes_project 10 32005400 32010087 - Rwdd1 protein_coding retained_intron MGP_WSBEiJ_T0025071.1 MGP_WSBEiJ_G0016757.1 mouse_genomes_project 10 75320523 75322328 - MGP_WSBEiJ_P0025071 Ddt protein_coding protein_coding MGP_WSBEiJ_T0025072.1 MGP_WSBEiJ_G0016757.1 mouse_genomes_project 10 75320526 75322708 - MGP_WSBEiJ_P0025072 Ddt protein_coding protein_coding MGP_WSBEiJ_T0011088.1 MGP_WSBEiJ_G0009245.1 mouse_genomes_project 10 92674583 92674692 - Gm27419 misc_RNA misc_RNA MGP_WSBEiJ_T0026434.1 MGP_WSBEiJ_G0017135.1 mouse_genomes_project 10 118759250 118776362 - MGP_WSBEiJ_P0026434 Gm10271 protein_coding protein_coding MGP_WSBEiJ_T0009483.1 MGP_WSBEiJ_G0007640.1 mouse_genomes_project 10 124782569 124782666 + Mir6412 miRNA miRNA MGP_WSBEiJ_T0009454.1 MGP_WSBEiJ_G0007611.1 mouse_genomes_project 10 80313715 80313798 + Gm22721 miRNA miRNA MGP_WSBEiJ_T0026231.1 MGP_WSBEiJ_G0017058.1 mouse_genomes_project 10 96182399 96204529 - MGP_WSBEiJ_P0026231 Mrpl42 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025298.1 MGP_WSBEiJ_G0016826.1 mouse_genomes_project 10 78646516 78748327 + MGP_WSBEiJ_P0025298 protein_coding protein_coding MGP_WSBEiJ_T0006008.1 MGP_WSBEiJ_G0005029.1 mouse_genomes_project 10 62256459 62259961 - Gm26789 lincRNA lincRNA MGP_WSBEiJ_T0024568.1 MGP_WSBEiJ_G0016654.1 mouse_genomes_project 10 58082188 58268906 - MGP_WSBEiJ_P0024568 Mcu protein_coding protein_coding MGP_WSBEiJ_T0024569.1 MGP_WSBEiJ_G0016654.1 mouse_genomes_project 10 58083799 58093273 - MGP_WSBEiJ_P0024569 Mcu protein_coding protein_coding MGP_WSBEiJ_T0024570.1 MGP_WSBEiJ_G0016654.1 mouse_genomes_project 10 58174799 58268889 - MGP_WSBEiJ_P0024570 Mcu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024571.1 MGP_WSBEiJ_G0016654.1 mouse_genomes_project 10 58251875 58268893 - Mcu protein_coding processed_transcript MGP_WSBEiJ_T0024572.1 MGP_WSBEiJ_G0016654.1 mouse_genomes_project 10 58252639 58268869 - Mcu protein_coding processed_transcript MGP_WSBEiJ_T0012180.1 MGP_WSBEiJ_G0010310.1 mouse_genomes_project 10 74359349 74359781 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0024146.1 MGP_WSBEiJ_G0016503.1 mouse_genomes_project 10 23795778 23796969 + MGP_WSBEiJ_P0024146 Gm9767 protein_coding protein_coding MGP_WSBEiJ_T0025282.1 MGP_WSBEiJ_G0016814.1 mouse_genomes_project 10 78180730 78194496 - MGP_WSBEiJ_P0025282 Rrp1 protein_coding protein_coding MGP_WSBEiJ_T0026240.1 MGP_WSBEiJ_G0017066.1 mouse_genomes_project 10 98439744 98446229 + MGP_WSBEiJ_P0026240 Kera protein_coding protein_coding MGP_WSBEiJ_T0011094.1 MGP_WSBEiJ_G0009251.1 mouse_genomes_project 10 126663270 126663529 + Gm23777 misc_RNA misc_RNA MGP_WSBEiJ_T0025146.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76403273 76471100 - MGP_WSBEiJ_P0025146 Pcbp3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0025147.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76403278 76608832 - MGP_WSBEiJ_P0025147 Pcbp3 protein_coding protein_coding MGP_WSBEiJ_T0025148.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76403279 76466874 - Pcbp3 protein_coding processed_transcript MGP_WSBEiJ_T0025149.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76403279 76469944 - MGP_WSBEiJ_P0025149 Pcbp3 protein_coding protein_coding MGP_WSBEiJ_T0025150.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76403281 76608931 - MGP_WSBEiJ_P0025150 Pcbp3 protein_coding protein_coding MGP_WSBEiJ_T0025151.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76403653 76441907 - Pcbp3 protein_coding processed_transcript MGP_WSBEiJ_T0025152.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76403791 76432423 - MGP_WSBEiJ_P0025152 Pcbp3 protein_coding protein_coding MGP_WSBEiJ_T0025153.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76404726 76460776 - MGP_WSBEiJ_P0025153 Pcbp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025154.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76433802 76552103 - Pcbp3 protein_coding processed_transcript MGP_WSBEiJ_T0025155.1 MGP_WSBEiJ_G0016784.1 mouse_genomes_project 10 76441890 76463473 - Pcbp3 protein_coding processed_transcript MGP_WSBEiJ_T0002944.1 MGP_WSBEiJ_G0002764.1 mouse_genomes_project 10 15125753 15130560 - Gm20655 antisense antisense MGP_WSBEiJ_T0002945.1 MGP_WSBEiJ_G0002764.1 mouse_genomes_project 10 15128337 15135153 - Gm20655 antisense antisense MGP_WSBEiJ_T0025218.1 MGP_WSBEiJ_G0016801.1 mouse_genomes_project 10 77517240 77518555 - MGP_WSBEiJ_P0025218 Gm19668 protein_coding protein_coding MGP_WSBEiJ_T0026513.1 MGP_WSBEiJ_G0017158.1 mouse_genomes_project 10 122276552 122282345 + MGP_WSBEiJ_P0026513 Llph protein_coding protein_coding MGP_WSBEiJ_T0026713.1 MGP_WSBEiJ_G0017228.1 mouse_genomes_project 10 130502616 130505720 + Ptges3 protein_coding retained_intron MGP_WSBEiJ_T0026714.1 MGP_WSBEiJ_G0017228.1 mouse_genomes_project 10 130503382 130509868 + MGP_WSBEiJ_P0026714 Ptges3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0006035.1 MGP_WSBEiJ_G0005049.1 mouse_genomes_project 10 90142643 90157743 + 1500026H17Rik lincRNA lincRNA MGP_WSBEiJ_T0096901.1 MGP_WSBEiJ_G0035582.1 mouse_genomes_project 10 78086038 78086157 + n-R5s77 rRNA rRNA MGP_WSBEiJ_T0009428.1 MGP_WSBEiJ_G0007585.1 mouse_genomes_project 10 40097895 40097950 + Mir3473b miRNA miRNA MGP_WSBEiJ_T0024224.1 MGP_WSBEiJ_G0016535.1 mouse_genomes_project 10 32049268 32127167 + MGP_WSBEiJ_P0024224 Trappc3l protein_coding protein_coding MGP_WSBEiJ_T0024802.1 MGP_WSBEiJ_G0016711.1 mouse_genomes_project 10 62285108 62358753 - MGP_WSBEiJ_P0024802 Sirt1 protein_coding protein_coding MGP_WSBEiJ_T0024803.1 MGP_WSBEiJ_G0016711.1 mouse_genomes_project 10 62285110 62306644 - MGP_WSBEiJ_P0024803 Sirt1 protein_coding protein_coding MGP_WSBEiJ_T0024804.1 MGP_WSBEiJ_G0016711.1 mouse_genomes_project 10 62285110 62304601 - MGP_WSBEiJ_P0024804 Sirt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024805.1 MGP_WSBEiJ_G0016711.1 mouse_genomes_project 10 62285110 62306644 - MGP_WSBEiJ_P0024805 Sirt1 protein_coding protein_coding MGP_WSBEiJ_T0024806.1 MGP_WSBEiJ_G0016711.1 mouse_genomes_project 10 62285162 62306647 - MGP_WSBEiJ_P0024806 Sirt1 protein_coding protein_coding MGP_WSBEiJ_T0024807.1 MGP_WSBEiJ_G0016711.1 mouse_genomes_project 10 62297907 62304601 - Sirt1 protein_coding retained_intron MGP_WSBEiJ_T0005980.1 MGP_WSBEiJ_G0005006.1 mouse_genomes_project 10 7094940 7261459 + Gm28905 lincRNA lincRNA MGP_WSBEiJ_T0012188.1 MGP_WSBEiJ_G0010318.1 mouse_genomes_project 10 87279754 87280163 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000783.1 MGP_WSBEiJ_G0000723.1 mouse_genomes_project 10 16331271 16331561 - TEC TEC MGP_WSBEiJ_T0002951.1 MGP_WSBEiJ_G0002770.1 mouse_genomes_project 10 37834096 37865212 - Gm16365 antisense antisense MGP_WSBEiJ_T0002952.1 MGP_WSBEiJ_G0002770.1 mouse_genomes_project 10 37835797 37892814 - Gm16365 antisense antisense MGP_WSBEiJ_T0002953.1 MGP_WSBEiJ_G0002770.1 mouse_genomes_project 10 37838153 37892818 - Gm16365 antisense antisense MGP_WSBEiJ_T0002954.1 MGP_WSBEiJ_G0002770.1 mouse_genomes_project 10 37872611 37892829 - Gm16365 antisense antisense MGP_WSBEiJ_T0003002.1 MGP_WSBEiJ_G0002808.1 mouse_genomes_project 10 86336500 86352933 + 4930486F22Rik antisense antisense MGP_WSBEiJ_T0096900.1 MGP_WSBEiJ_G0035581.1 mouse_genomes_project 10 43221720 43221831 + Gm27977 rRNA rRNA MGP_WSBEiJ_T0026198.1 MGP_WSBEiJ_G0017049.1 mouse_genomes_project 10 94656642 94769021 + MGP_WSBEiJ_P0026198 Fgd6 protein_coding protein_coding MGP_WSBEiJ_T0026199.1 MGP_WSBEiJ_G0017049.1 mouse_genomes_project 10 94694680 94712528 + Fgd6 protein_coding processed_transcript MGP_WSBEiJ_T0026200.1 MGP_WSBEiJ_G0017049.1 mouse_genomes_project 10 94756851 94763562 + Fgd6 protein_coding retained_intron MGP_WSBEiJ_T0002974.1 MGP_WSBEiJ_G0002786.1 mouse_genomes_project 10 69557184 69557898 - Gm7097 antisense antisense MGP_WSBEiJ_T0024847.1 MGP_WSBEiJ_G0016723.1 mouse_genomes_project 10 67126416 67192276 + MGP_WSBEiJ_P0024847 Rtkn2 protein_coding protein_coding MGP_WSBEiJ_T0024848.1 MGP_WSBEiJ_G0016723.1 mouse_genomes_project 10 67126444 67192272 + MGP_WSBEiJ_P0024848 Rtkn2 protein_coding protein_coding MGP_WSBEiJ_T0024849.1 MGP_WSBEiJ_G0016723.1 mouse_genomes_project 10 67126451 67210509 + MGP_WSBEiJ_P0024849 Rtkn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024850.1 MGP_WSBEiJ_G0016723.1 mouse_genomes_project 10 67126544 67210512 + MGP_WSBEiJ_P0024850 Rtkn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0024851.1 MGP_WSBEiJ_G0016723.1 mouse_genomes_project 10 67126561 67190710 + MGP_WSBEiJ_P0024851 Rtkn2 protein_coding protein_coding MGP_WSBEiJ_T0024852.1 MGP_WSBEiJ_G0016723.1 mouse_genomes_project 10 67192375 67200717 + Rtkn2 protein_coding processed_transcript MGP_WSBEiJ_T0002972.1 MGP_WSBEiJ_G0002785.1 mouse_genomes_project 10 67173512 67174377 - Gm16212 antisense antisense MGP_WSBEiJ_T0002973.1 MGP_WSBEiJ_G0002785.1 mouse_genomes_project 10 67174089 67174702 - Gm16212 antisense antisense MGP_WSBEiJ_T0000803.1 MGP_WSBEiJ_G0000742.1 mouse_genomes_project 10 115977124 115977439 + TEC TEC MGP_WSBEiJ_T0024434.1 MGP_WSBEiJ_G0016603.1 mouse_genomes_project 10 42984790 43006681 - MGP_WSBEiJ_P0024434 Prdm1 protein_coding protein_coding MGP_WSBEiJ_T0024435.1 MGP_WSBEiJ_G0016603.1 mouse_genomes_project 10 42985902 43006620 - MGP_WSBEiJ_P0024435 Prdm1 protein_coding protein_coding MGP_WSBEiJ_T0024436.1 MGP_WSBEiJ_G0016603.1 mouse_genomes_project 10 42987276 43005139 - MGP_WSBEiJ_P0024436 Prdm1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024437.1 MGP_WSBEiJ_G0016603.1 mouse_genomes_project 10 42994355 43079540 - Prdm1 protein_coding processed_transcript MGP_WSBEiJ_T0025400.1 MGP_WSBEiJ_G0016856.1 mouse_genomes_project 10 79764647 79766553 + MGP_WSBEiJ_P0025400 Elane protein_coding protein_coding MGP_WSBEiJ_T0006059.1 MGP_WSBEiJ_G0005059.1 mouse_genomes_project 10 104159280 104160146 - Gm17028 lincRNA lincRNA MGP_WSBEiJ_T0003020.1 MGP_WSBEiJ_G0002821.1 mouse_genomes_project 10 118175063 118178249 + Kcnmb4os1 antisense antisense MGP_WSBEiJ_T0024942.1 MGP_WSBEiJ_G0016736.1 mouse_genomes_project 10 70236368 70478675 - MGP_WSBEiJ_P0024942 Bicc1 protein_coding protein_coding MGP_WSBEiJ_T0024943.1 MGP_WSBEiJ_G0016736.1 mouse_genomes_project 10 70236380 70478606 - MGP_WSBEiJ_P0024943 Bicc1 protein_coding protein_coding MGP_WSBEiJ_T0024944.1 MGP_WSBEiJ_G0016736.1 mouse_genomes_project 10 70247833 70261725 - Bicc1 protein_coding retained_intron MGP_WSBEiJ_T0024147.1 MGP_WSBEiJ_G0016504.1 mouse_genomes_project 10 23943942 23974489 + MGP_WSBEiJ_P0024147 Samd3 protein_coding protein_coding MGP_WSBEiJ_T0024148.1 MGP_WSBEiJ_G0016504.1 mouse_genomes_project 10 23943942 23987403 + MGP_WSBEiJ_P0024148 Samd3 protein_coding protein_coding MGP_WSBEiJ_T0025017.1 MGP_WSBEiJ_G0016745.1 mouse_genomes_project 10 74535587 74550049 + Rab36 protein_coding retained_intron MGP_WSBEiJ_T0025018.1 MGP_WSBEiJ_G0016745.1 mouse_genomes_project 10 74535595 74556011 + MGP_WSBEiJ_P0025018 Rab36 protein_coding protein_coding MGP_WSBEiJ_T0025019.1 MGP_WSBEiJ_G0016745.1 mouse_genomes_project 10 74535613 74555368 + MGP_WSBEiJ_P0025019 Rab36 protein_coding protein_coding MGP_WSBEiJ_T0025020.1 MGP_WSBEiJ_G0016745.1 mouse_genomes_project 10 74535755 74548841 + Rab36 protein_coding retained_intron MGP_WSBEiJ_T0025021.1 MGP_WSBEiJ_G0016745.1 mouse_genomes_project 10 74535802 74547363 + Rab36 protein_coding retained_intron MGP_WSBEiJ_T0025022.1 MGP_WSBEiJ_G0016745.1 mouse_genomes_project 10 74535851 74551960 + MGP_WSBEiJ_P0025022 Rab36 protein_coding protein_coding MGP_WSBEiJ_T0025023.1 MGP_WSBEiJ_G0016745.1 mouse_genomes_project 10 74536365 74555326 + MGP_WSBEiJ_P0025023 Rab36 protein_coding protein_coding MGP_WSBEiJ_T0025024.1 MGP_WSBEiJ_G0016745.1 mouse_genomes_project 10 74536752 74551955 + Rab36 protein_coding retained_intron MGP_WSBEiJ_T0002960.1 MGP_WSBEiJ_G0002775.1 mouse_genomes_project 10 41641744 41643140 + Gm29245 antisense antisense MGP_WSBEiJ_T0024225.1 MGP_WSBEiJ_G0016536.1 mouse_genomes_project 10 32049499 32055029 - MGP_WSBEiJ_P0024225 Fam26d protein_coding protein_coding MGP_WSBEiJ_T0025977.1 MGP_WSBEiJ_G0017004.1 mouse_genomes_project 10 87050686 87112221 + MGP_WSBEiJ_P0025977 Nt5dc3 protein_coding protein_coding MGP_WSBEiJ_T0025479.1 MGP_WSBEiJ_G0016875.1 mouse_genomes_project 10 80052534 80064267 + MGP_WSBEiJ_P0025479 Midn protein_coding protein_coding MGP_WSBEiJ_T0025480.1 MGP_WSBEiJ_G0016875.1 mouse_genomes_project 10 80052534 80064268 + MGP_WSBEiJ_P0025480 Midn protein_coding protein_coding MGP_WSBEiJ_T0025481.1 MGP_WSBEiJ_G0016875.1 mouse_genomes_project 10 80055117 80056284 + MGP_WSBEiJ_P0025481 Midn protein_coding protein_coding MGP_WSBEiJ_T0025482.1 MGP_WSBEiJ_G0016875.1 mouse_genomes_project 10 80055891 80059686 + Midn protein_coding processed_transcript MGP_WSBEiJ_T0025483.1 MGP_WSBEiJ_G0016875.1 mouse_genomes_project 10 80056460 80059867 + MGP_WSBEiJ_P0025483 Midn protein_coding protein_coding MGP_WSBEiJ_T0025484.1 MGP_WSBEiJ_G0016875.1 mouse_genomes_project 10 80057157 80060471 + MGP_WSBEiJ_P0025484 Midn protein_coding protein_coding MGP_WSBEiJ_T0025485.1 MGP_WSBEiJ_G0016875.1 mouse_genomes_project 10 80057241 80059695 + MGP_WSBEiJ_P0025485 Midn protein_coding protein_coding MGP_WSBEiJ_T0024511.1 MGP_WSBEiJ_G0016636.1 mouse_genomes_project 10 56368732 56395198 + MGP_WSBEiJ_P0024511 Hsf2 protein_coding protein_coding MGP_WSBEiJ_T0024512.1 MGP_WSBEiJ_G0016636.1 mouse_genomes_project 10 56368868 56394280 + MGP_WSBEiJ_P0024512 Hsf2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009468.1 MGP_WSBEiJ_G0007625.1 mouse_genomes_project 10 93157455 93157549 + Gm22582 miRNA miRNA MGP_WSBEiJ_T0024079.1 MGP_WSBEiJ_G0016472.1 mouse_genomes_project 10 20240564 20301303 + MGP_WSBEiJ_P0024079 Slc2a12 protein_coding protein_coding MGP_WSBEiJ_T0024080.1 MGP_WSBEiJ_G0016472.1 mouse_genomes_project 10 20244560 20262094 + Slc2a12 protein_coding processed_transcript MGP_WSBEiJ_T0026705.1 MGP_WSBEiJ_G0017225.1 mouse_genomes_project 10 130423912 130440498 - MGP_WSBEiJ_P0026705 Hsd17b6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026693.1 MGP_WSBEiJ_G0017219.1 mouse_genomes_project 10 130153852 130230775 + MGP_WSBEiJ_P0026693 protein_coding protein_coding MGP_WSBEiJ_T0026694.1 MGP_WSBEiJ_G0017219.1 mouse_genomes_project 10 130175012 130180152 + MGP_WSBEiJ_P0026694 protein_coding protein_coding MGP_WSBEiJ_T0097637.1 MGP_WSBEiJ_G0036300.1 mouse_genomes_project 10 56948955 56949062 - Gm23058 snRNA snRNA MGP_WSBEiJ_T0026124.1 MGP_WSBEiJ_G0017033.1 mouse_genomes_project 10 91620283 91627773 - MGP_WSBEiJ_P0026124 Slc25a3 protein_coding protein_coding MGP_WSBEiJ_T0026125.1 MGP_WSBEiJ_G0017033.1 mouse_genomes_project 10 91620500 91627671 - MGP_WSBEiJ_P0026125 Slc25a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026126.1 MGP_WSBEiJ_G0017033.1 mouse_genomes_project 10 91620501 91627717 - MGP_WSBEiJ_P0026126 Slc25a3 protein_coding protein_coding MGP_WSBEiJ_T0026127.1 MGP_WSBEiJ_G0017033.1 mouse_genomes_project 10 91620517 91627669 - MGP_WSBEiJ_P0026127 Slc25a3 protein_coding protein_coding MGP_WSBEiJ_T0026128.1 MGP_WSBEiJ_G0017033.1 mouse_genomes_project 10 91620720 91623547 - Slc25a3 protein_coding retained_intron MGP_WSBEiJ_T0026129.1 MGP_WSBEiJ_G0017033.1 mouse_genomes_project 10 91621882 91624435 - Slc25a3 protein_coding processed_transcript MGP_WSBEiJ_T0026130.1 MGP_WSBEiJ_G0017033.1 mouse_genomes_project 10 91621908 91625937 - Slc25a3 protein_coding retained_intron MGP_WSBEiJ_T0026131.1 MGP_WSBEiJ_G0017033.1 mouse_genomes_project 10 91623484 91627736 - Slc25a3 protein_coding retained_intron MGP_WSBEiJ_T0025441.1 MGP_WSBEiJ_G0016870.1 mouse_genomes_project 10 79939822 79949108 + Gpx4 protein_coding processed_transcript MGP_WSBEiJ_T0025442.1 MGP_WSBEiJ_G0016870.1 mouse_genomes_project 10 79946158 79949108 + MGP_WSBEiJ_P0025442 Gpx4 protein_coding protein_coding MGP_WSBEiJ_T0025443.1 MGP_WSBEiJ_G0016870.1 mouse_genomes_project 10 79946705 79947778 + Gpx4 protein_coding processed_transcript MGP_WSBEiJ_T0025444.1 MGP_WSBEiJ_G0016870.1 mouse_genomes_project 10 79946707 79949108 + MGP_WSBEiJ_P0025444 Gpx4 protein_coding protein_coding MGP_WSBEiJ_T0025445.1 MGP_WSBEiJ_G0016870.1 mouse_genomes_project 10 79947135 79949063 + MGP_WSBEiJ_P0025445 Gpx4 protein_coding protein_coding MGP_WSBEiJ_T0025446.1 MGP_WSBEiJ_G0016870.1 mouse_genomes_project 10 79948563 79949034 + Gpx4 protein_coding retained_intron MGP_WSBEiJ_T0025447.1 MGP_WSBEiJ_G0016870.1 mouse_genomes_project 10 79948666 79949032 + Gpx4 protein_coding retained_intron MGP_WSBEiJ_T0023695.1 MGP_WSBEiJ_G0016377.1 mouse_genomes_project 10 480425 495523 + MGP_WSBEiJ_P0023695 Iyd protein_coding protein_coding MGP_WSBEiJ_T0023696.1 MGP_WSBEiJ_G0016377.1 mouse_genomes_project 10 480473 492744 + Iyd protein_coding retained_intron MGP_WSBEiJ_T0006077.1 MGP_WSBEiJ_G0005073.1 mouse_genomes_project 10 131489095 131497626 + 9030616G12Rik lincRNA lincRNA MGP_WSBEiJ_T0024419.1 MGP_WSBEiJ_G0016595.1 mouse_genomes_project 10 41981695 42018004 + MGP_WSBEiJ_P0024419 Bend3 protein_coding protein_coding MGP_WSBEiJ_T0026378.1 MGP_WSBEiJ_G0017117.1 mouse_genomes_project 10 114520627 114523269 + MGP_WSBEiJ_P0026378 Gm26596 protein_coding protein_coding MGP_WSBEiJ_T0016533.1 MGP_WSBEiJ_G0014557.1 mouse_genomes_project 10 106779831 106787885 + Gm15663 processed_transcript antisense MGP_WSBEiJ_T0016534.1 MGP_WSBEiJ_G0014557.1 mouse_genomes_project 10 106780437 106789719 + Gm15663 processed_transcript lincRNA MGP_WSBEiJ_T0100452.1 MGP_WSBEiJ_G0038911.1 mouse_genomes_project 10 106722674 106722858 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0025292.1 MGP_WSBEiJ_G0016822.1 mouse_genomes_project 10 78536411 78543427 - MGP_WSBEiJ_P0025292 Ccdc105 protein_coding protein_coding MGP_WSBEiJ_T0100448.1 MGP_WSBEiJ_G0038907.1 mouse_genomes_project 10 21631069 21631602 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0023744.1 MGP_WSBEiJ_G0016387.1 mouse_genomes_project 10 2090176 2092960 + MGP_WSBEiJ_P0023744 Gm10097 protein_coding protein_coding MGP_WSBEiJ_T0097620.1 MGP_WSBEiJ_G0036283.1 mouse_genomes_project 10 28341791 28341893 + Gm22623 snRNA snRNA MGP_WSBEiJ_T0096899.1 MGP_WSBEiJ_G0035580.1 mouse_genomes_project 10 39831100 39831205 - Gm27783 rRNA rRNA MGP_WSBEiJ_T0024549.1 MGP_WSBEiJ_G0016644.1 mouse_genomes_project 10 57106229 57184202 + MGP_WSBEiJ_P0024549 Ccdc138 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024550.1 MGP_WSBEiJ_G0016644.1 mouse_genomes_project 10 57106291 57184201 + MGP_WSBEiJ_P0024550 Ccdc138 protein_coding protein_coding MGP_WSBEiJ_T0009449.1 MGP_WSBEiJ_G0007606.1 mouse_genomes_project 10 78226146 78226210 - Mir6908 miRNA miRNA MGP_WSBEiJ_T0025926.1 MGP_WSBEiJ_G0016990.1 mouse_genomes_project 10 85329844 85386571 - MGP_WSBEiJ_P0025926 Cry1 protein_coding protein_coding MGP_WSBEiJ_T0002993.1 MGP_WSBEiJ_G0002801.1 mouse_genomes_project 10 81314406 81315623 - Gm16315 antisense antisense MGP_WSBEiJ_T0026678.1 MGP_WSBEiJ_G0017213.1 mouse_genomes_project 10 130048149 130053935 - MGP_WSBEiJ_P0026678 Nab2 protein_coding protein_coding MGP_WSBEiJ_T0026679.1 MGP_WSBEiJ_G0017213.1 mouse_genomes_project 10 130048152 130053857 - MGP_WSBEiJ_P0026679 Nab2 protein_coding protein_coding MGP_WSBEiJ_T0026680.1 MGP_WSBEiJ_G0017213.1 mouse_genomes_project 10 130052149 130052706 - MGP_WSBEiJ_P0026680 Nab2 protein_coding protein_coding MGP_WSBEiJ_T0026681.1 MGP_WSBEiJ_G0017213.1 mouse_genomes_project 10 130052208 130055791 - MGP_WSBEiJ_P0026681 Nab2 protein_coding protein_coding MGP_WSBEiJ_T0026899.1 MGP_WSBEiJ_G0017316.1 mouse_genomes_project 10 132790530 132791689 - MGP_WSBEiJ_P0026899 Olfr825 protein_coding protein_coding MGP_WSBEiJ_T0024608.1 MGP_WSBEiJ_G0016663.1 mouse_genomes_project 10 58991356 59019922 + MGP_WSBEiJ_P0024608 Psap protein_coding protein_coding MGP_WSBEiJ_T0024609.1 MGP_WSBEiJ_G0016663.1 mouse_genomes_project 10 58991357 59019925 + MGP_WSBEiJ_P0024609 Psap protein_coding protein_coding MGP_WSBEiJ_T0024610.1 MGP_WSBEiJ_G0016663.1 mouse_genomes_project 10 58991357 59019925 + MGP_WSBEiJ_P0024610 Psap protein_coding protein_coding MGP_WSBEiJ_T0024611.1 MGP_WSBEiJ_G0016663.1 mouse_genomes_project 10 58991357 59019925 + MGP_WSBEiJ_P0024611 Psap protein_coding protein_coding MGP_WSBEiJ_T0024612.1 MGP_WSBEiJ_G0016663.1 mouse_genomes_project 10 58998160 59019925 + MGP_WSBEiJ_P0024612 Psap protein_coding protein_coding MGP_WSBEiJ_T0024706.1 MGP_WSBEiJ_G0016689.1 mouse_genomes_project 10 61033918 61088127 - MGP_WSBEiJ_P0024706 Tspan15 protein_coding protein_coding MGP_WSBEiJ_T0012150.1 MGP_WSBEiJ_G0010280.1 mouse_genomes_project 10 18078270 18082220 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0023873.1 MGP_WSBEiJ_G0016417.1 mouse_genomes_project 10 8289521 8328634 + MGP_WSBEiJ_P0023873 Shprh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023874.1 MGP_WSBEiJ_G0016417.1 mouse_genomes_project 10 8289524 8358946 + MGP_WSBEiJ_P0023874 Shprh protein_coding protein_coding MGP_WSBEiJ_T0023875.1 MGP_WSBEiJ_G0016417.1 mouse_genomes_project 10 8289567 8294629 + Shprh protein_coding retained_intron MGP_WSBEiJ_T0023876.1 MGP_WSBEiJ_G0016417.1 mouse_genomes_project 10 8289618 8350826 + MGP_WSBEiJ_P0023876 Shprh protein_coding protein_coding MGP_WSBEiJ_T0023877.1 MGP_WSBEiJ_G0016417.1 mouse_genomes_project 10 8289618 8350826 + MGP_WSBEiJ_P0023877 Shprh protein_coding protein_coding MGP_WSBEiJ_T0023878.1 MGP_WSBEiJ_G0016417.1 mouse_genomes_project 10 8304371 8310090 + MGP_WSBEiJ_P0023878 Shprh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0023879.1 MGP_WSBEiJ_G0016417.1 mouse_genomes_project 10 8306483 8355648 + Shprh protein_coding retained_intron MGP_WSBEiJ_T0023880.1 MGP_WSBEiJ_G0016417.1 mouse_genomes_project 10 8346252 8350885 + Shprh protein_coding retained_intron MGP_WSBEiJ_T0025786.1 MGP_WSBEiJ_G0016955.1 mouse_genomes_project 10 81606543 81614824 + MGP_WSBEiJ_P0025786 Aes protein_coding protein_coding MGP_WSBEiJ_T0003027.1 MGP_WSBEiJ_G0002824.1 mouse_genomes_project 10 121429965 121430911 - Gm16321 antisense antisense MGP_WSBEiJ_T0024425.1 MGP_WSBEiJ_G0016598.1 mouse_genomes_project 10 42108609 42150936 + MGP_WSBEiJ_P0024425 F930017D23Rik protein_coding protein_coding MGP_WSBEiJ_T0098865.1 MGP_WSBEiJ_G0037528.1 mouse_genomes_project 10 81177469 81177533 + Snord37 snoRNA snoRNA MGP_WSBEiJ_T0025127.1 MGP_WSBEiJ_G0016779.1 mouse_genomes_project 10 76160095 76164070 + Lss protein_coding processed_transcript MGP_WSBEiJ_T0025128.1 MGP_WSBEiJ_G0016779.1 mouse_genomes_project 10 76160114 76177366 + Lss protein_coding retained_intron MGP_WSBEiJ_T0025129.1 MGP_WSBEiJ_G0016779.1 mouse_genomes_project 10 76160114 76183975 + MGP_WSBEiJ_P0025129 Lss protein_coding protein_coding MGP_WSBEiJ_T0025130.1 MGP_WSBEiJ_G0016779.1 mouse_genomes_project 10 76160119 76185637 + Lss protein_coding retained_intron MGP_WSBEiJ_T0025131.1 MGP_WSBEiJ_G0016779.1 mouse_genomes_project 10 76160189 76164225 + Lss protein_coding retained_intron MGP_WSBEiJ_T0025132.1 MGP_WSBEiJ_G0016779.1 mouse_genomes_project 10 76170379 76171244 + MGP_WSBEiJ_P0025132 Lss protein_coding protein_coding MGP_WSBEiJ_T0025133.1 MGP_WSBEiJ_G0016779.1 mouse_genomes_project 10 76179707 76185113 + Lss protein_coding retained_intron MGP_WSBEiJ_T0025134.1 MGP_WSBEiJ_G0016779.1 mouse_genomes_project 10 76180768 76181731 + Lss protein_coding retained_intron MGP_WSBEiJ_T0016541.1 MGP_WSBEiJ_G0014561.1 mouse_genomes_project 10 129645991 129647083 - Gm4189 processed_transcript processed_transcript MGP_WSBEiJ_T0016542.1 MGP_WSBEiJ_G0014561.1 mouse_genomes_project 10 129645991 129647020 - Gm4189 processed_transcript retained_intron MGP_WSBEiJ_T0012164.1 MGP_WSBEiJ_G0010294.1 mouse_genomes_project 10 41862405 41862838 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0025267.1 MGP_WSBEiJ_G0016809.1 mouse_genomes_project 10 77809817 77820029 + MGP_WSBEiJ_P0025267 Icosl protein_coding protein_coding MGP_WSBEiJ_T0023819.1 MGP_WSBEiJ_G0016402.1 mouse_genomes_project 10 4700702 4739981 + MGP_WSBEiJ_P0023819 Lats1 protein_coding protein_coding MGP_WSBEiJ_T0023820.1 MGP_WSBEiJ_G0016402.1 mouse_genomes_project 10 4712343 4737111 + MGP_WSBEiJ_P0023820 Lats1 protein_coding protein_coding MGP_WSBEiJ_T0026457.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119569982 119591545 - MGP_WSBEiJ_P0026457 Mdm2 protein_coding protein_coding MGP_WSBEiJ_T0026458.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119569982 119591545 - MGP_WSBEiJ_P0026458 Mdm2 protein_coding protein_coding MGP_WSBEiJ_T0026459.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119569989 119590809 - MGP_WSBEiJ_P0026459 Mdm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026460.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119571205 119591472 - Mdm2 protein_coding retained_intron MGP_WSBEiJ_T0026461.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119571339 119572617 - Mdm2 protein_coding retained_intron MGP_WSBEiJ_T0026462.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119575791 119590865 - Mdm2 protein_coding processed_transcript MGP_WSBEiJ_T0026463.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119576898 119591498 - Mdm2 protein_coding processed_transcript MGP_WSBEiJ_T0026464.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119583036 119591079 - Mdm2 protein_coding processed_transcript MGP_WSBEiJ_T0026465.1 MGP_WSBEiJ_G0017147.1 mouse_genomes_project 10 119590504 119591501 - Mdm2 protein_coding retained_intron MGP_WSBEiJ_T0006072.1 MGP_WSBEiJ_G0005068.1 mouse_genomes_project 10 121398911 121412912 + 1700025F24Rik lincRNA lincRNA MGP_WSBEiJ_T0097625.1 MGP_WSBEiJ_G0036288.1 mouse_genomes_project 10 39808661 39808768 + Gm25626 snRNA snRNA MGP_WSBEiJ_T0025822.1 MGP_WSBEiJ_G0016959.1 mouse_genomes_project 10 81675268 81680802 - MGP_WSBEiJ_P0025822 Sirt6 protein_coding protein_coding MGP_WSBEiJ_T0025823.1 MGP_WSBEiJ_G0016959.1 mouse_genomes_project 10 81675270 81681279 - MGP_WSBEiJ_P0025823 Sirt6 protein_coding protein_coding MGP_WSBEiJ_T0025824.1 MGP_WSBEiJ_G0016959.1 mouse_genomes_project 10 81679008 81681048 - Sirt6 protein_coding retained_intron MGP_WSBEiJ_T0025825.1 MGP_WSBEiJ_G0016959.1 mouse_genomes_project 10 81679260 81680739 - MGP_WSBEiJ_P0025825 Sirt6 protein_coding protein_coding MGP_WSBEiJ_T0024105.1 MGP_WSBEiJ_G0016488.1 mouse_genomes_project 10 21622367 21639367 + MGP_WSBEiJ_P0024105 protein_coding protein_coding MGP_WSBEiJ_T0026241.1 MGP_WSBEiJ_G0017067.1 mouse_genomes_project 10 98482634 98518431 + MGP_WSBEiJ_P0026241 Epyc protein_coding protein_coding MGP_WSBEiJ_T0026242.1 MGP_WSBEiJ_G0017067.1 mouse_genomes_project 10 98485657 98518985 + MGP_WSBEiJ_P0026242 Epyc protein_coding protein_coding MGP_WSBEiJ_T0024444.1 MGP_WSBEiJ_G0016608.1 mouse_genomes_project 10 44140698 44274434 + MGP_WSBEiJ_P0024444 Hace1 protein_coding protein_coding MGP_WSBEiJ_T0024445.1 MGP_WSBEiJ_G0016608.1 mouse_genomes_project 10 44141010 44168579 + MGP_WSBEiJ_P0024445 Hace1 protein_coding protein_coding MGP_WSBEiJ_T0024446.1 MGP_WSBEiJ_G0016608.1 mouse_genomes_project 10 44141149 44168533 + Hace1 protein_coding processed_transcript MGP_WSBEiJ_T0024447.1 MGP_WSBEiJ_G0016608.1 mouse_genomes_project 10 44151020 44212391 + Hace1 protein_coding processed_transcript MGP_WSBEiJ_T0024448.1 MGP_WSBEiJ_G0016608.1 mouse_genomes_project 10 44236400 44274248 + MGP_WSBEiJ_P0024448 Hace1 protein_coding protein_coding MGP_WSBEiJ_T0024449.1 MGP_WSBEiJ_G0016608.1 mouse_genomes_project 10 44237444 44274248 + MGP_WSBEiJ_P0024449 Hace1 protein_coding protein_coding MGP_WSBEiJ_T0024450.1 MGP_WSBEiJ_G0016608.1 mouse_genomes_project 10 44242009 44274360 + Hace1 protein_coding retained_intron MGP_WSBEiJ_T0025578.1 MGP_WSBEiJ_G0016894.1 mouse_genomes_project 10 80435977 80463834 + MGP_WSBEiJ_P0025578 Onecut3 protein_coding protein_coding MGP_WSBEiJ_T0025935.1 MGP_WSBEiJ_G0016992.1 mouse_genomes_project 10 86096437 86114452 + MGP_WSBEiJ_P0025935 Pwp1 protein_coding protein_coding MGP_WSBEiJ_T0025936.1 MGP_WSBEiJ_G0016992.1 mouse_genomes_project 10 86096490 86109247 + Pwp1 protein_coding retained_intron MGP_WSBEiJ_T0025937.1 MGP_WSBEiJ_G0016992.1 mouse_genomes_project 10 86096512 86106738 + MGP_WSBEiJ_P0025937 Pwp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025938.1 MGP_WSBEiJ_G0016992.1 mouse_genomes_project 10 86100865 86109038 + Pwp1 protein_coding retained_intron MGP_WSBEiJ_T0012178.1 MGP_WSBEiJ_G0010308.1 mouse_genomes_project 10 72672956 72674022 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009465.1 MGP_WSBEiJ_G0007622.1 mouse_genomes_project 10 86972952 86973085 - Gm25745 miRNA miRNA MGP_WSBEiJ_T0026756.1 MGP_WSBEiJ_G0017239.1 mouse_genomes_project 10 130755895 130757839 - MGP_WSBEiJ_P0026756 Il23a protein_coding protein_coding MGP_WSBEiJ_T0097655.1 MGP_WSBEiJ_G0036318.1 mouse_genomes_project 10 91500229 91500332 + Gm25390 snRNA snRNA MGP_WSBEiJ_T0012185.1 MGP_WSBEiJ_G0010315.1 mouse_genomes_project 10 80938996 80939253 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097667.1 MGP_WSBEiJ_G0036330.1 mouse_genomes_project 10 129482817 129482906 - Gm23664 snRNA snRNA MGP_WSBEiJ_T0096758.1 MGP_WSBEiJ_G0035439.1 mouse_genomes_project 10 69558559 69561335 - pseudogene pseudogene MGP_WSBEiJ_T0002984.1 MGP_WSBEiJ_G0002795.1 mouse_genomes_project 10 80202807 80203370 - Gm15122 antisense antisense MGP_WSBEiJ_T0025126.1 MGP_WSBEiJ_G0016778.1 mouse_genomes_project 10 76095816 76149044 + MGP_WSBEiJ_P0025126 Mcm3ap protein_coding protein_coding MGP_WSBEiJ_T0024027.1 MGP_WSBEiJ_G0016457.1 mouse_genomes_project 10 17576804 17710405 + MGP_WSBEiJ_P0024027 Map7 protein_coding protein_coding MGP_WSBEiJ_T0024028.1 MGP_WSBEiJ_G0016457.1 mouse_genomes_project 10 17577262 17713295 + MGP_WSBEiJ_P0024028 Map7 protein_coding protein_coding MGP_WSBEiJ_T0024029.1 MGP_WSBEiJ_G0016457.1 mouse_genomes_project 10 17599522 17688779 + MGP_WSBEiJ_P0024029 Map7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0006055.1 MGP_WSBEiJ_G0005057.1 mouse_genomes_project 10 96472248 96526043 + 4732465J04Rik lincRNA lincRNA MGP_WSBEiJ_T0006056.1 MGP_WSBEiJ_G0005057.1 mouse_genomes_project 10 96506432 96526448 + 4732465J04Rik lincRNA lincRNA MGP_WSBEiJ_T0098884.1 MGP_WSBEiJ_G0037547.1 mouse_genomes_project 10 130518675 130518749 + Snord59a snoRNA snoRNA MGP_WSBEiJ_T0100456.1 MGP_WSBEiJ_G0038915.1 mouse_genomes_project 10 131915701 131918197 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0025085.1 MGP_WSBEiJ_G0016763.1 mouse_genomes_project 10 75434221 75436018 - MGP_WSBEiJ_P0025085 Mif protein_coding protein_coding MGP_WSBEiJ_T0024466.1 MGP_WSBEiJ_G0016616.1 mouse_genomes_project 10 50401060 50450713 + Rfx6 protein_coding retained_intron MGP_WSBEiJ_T0024467.1 MGP_WSBEiJ_G0016616.1 mouse_genomes_project 10 50401060 50459912 + MGP_WSBEiJ_P0024467 Rfx6 protein_coding protein_coding MGP_WSBEiJ_T0024468.1 MGP_WSBEiJ_G0016616.1 mouse_genomes_project 10 50408848 50459912 + MGP_WSBEiJ_P0024468 Rfx6 protein_coding protein_coding MGP_WSBEiJ_T0026415.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118244962 118345680 - MGP_WSBEiJ_P0026415 Cnot2 protein_coding protein_coding MGP_WSBEiJ_T0026416.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118244966 118310530 - MGP_WSBEiJ_P0026416 Cnot2 protein_coding protein_coding MGP_WSBEiJ_T0026417.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118244966 118345665 - MGP_WSBEiJ_P0026417 Cnot2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026418.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118244967 118345669 - MGP_WSBEiJ_P0026418 Cnot2 protein_coding protein_coding MGP_WSBEiJ_T0026419.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118245588 118345680 - MGP_WSBEiJ_P0026419 Cnot2 protein_coding protein_coding MGP_WSBEiJ_T0026420.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118245998 118345671 - MGP_WSBEiJ_P0026420 Cnot2 protein_coding protein_coding MGP_WSBEiJ_T0026421.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118246001 118298560 - MGP_WSBEiJ_P0026421 Cnot2 protein_coding protein_coding MGP_WSBEiJ_T0026422.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118257631 118345652 - Cnot2 protein_coding processed_transcript MGP_WSBEiJ_T0026423.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118257881 118345662 - Cnot2 protein_coding processed_transcript MGP_WSBEiJ_T0026424.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118258913 118345659 - Cnot2 protein_coding processed_transcript MGP_WSBEiJ_T0026425.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118258918 118345654 - Cnot2 protein_coding processed_transcript MGP_WSBEiJ_T0026426.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118264145 118345634 - MGP_WSBEiJ_P0026426 Cnot2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026427.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118266486 118345660 - Cnot2 protein_coding processed_transcript MGP_WSBEiJ_T0026428.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118271340 118345665 - Cnot2 protein_coding processed_transcript MGP_WSBEiJ_T0026429.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118271340 118345680 - MGP_WSBEiJ_P0026429 Cnot2 protein_coding protein_coding MGP_WSBEiJ_T0026430.1 MGP_WSBEiJ_G0017132.1 mouse_genomes_project 10 118271705 118345652 - Cnot2 protein_coding processed_transcript MGP_WSBEiJ_T0025284.1 MGP_WSBEiJ_G0016816.1 mouse_genomes_project 10 78217832 78245896 - MGP_WSBEiJ_P0025284 Pdxk protein_coding protein_coding MGP_WSBEiJ_T0023798.1 MGP_WSBEiJ_G0016398.1 mouse_genomes_project 10 4521285 4551170 - MGP_WSBEiJ_P0023798 Ulbp1 protein_coding protein_coding MGP_WSBEiJ_T0023799.1 MGP_WSBEiJ_G0016398.1 mouse_genomes_project 10 4521803 4533258 - MGP_WSBEiJ_P0023799 Ulbp1 protein_coding protein_coding MGP_WSBEiJ_T0024291.1 MGP_WSBEiJ_G0016557.1 mouse_genomes_project 10 38211314 38219916 - MGP_WSBEiJ_P0024291 protein_coding protein_coding MGP_WSBEiJ_T0006021.1 MGP_WSBEiJ_G0005038.1 mouse_genomes_project 10 77166487 77196317 + 2810425M01Rik lincRNA lincRNA MGP_WSBEiJ_T0024483.1 MGP_WSBEiJ_G0016623.1 mouse_genomes_project 10 51149965 51161781 + MGP_WSBEiJ_P0024483 Nepn protein_coding protein_coding MGP_WSBEiJ_T0024484.1 MGP_WSBEiJ_G0016623.1 mouse_genomes_project 10 51152595 51165432 + MGP_WSBEiJ_P0024484 Nepn protein_coding protein_coding MGP_WSBEiJ_T0024348.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39957356 39971366 - protein_coding processed_transcript MGP_WSBEiJ_T0024349.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39957359 40029197 - MGP_WSBEiJ_P0024349 protein_coding protein_coding MGP_WSBEiJ_T0024350.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39957359 40008124 - MGP_WSBEiJ_P0024350 protein_coding protein_coding MGP_WSBEiJ_T0024351.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39957802 40140988 - MGP_WSBEiJ_P0024351 protein_coding unknown_likely_coding MGP_WSBEiJ_T0024352.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39957935 39998657 - MGP_WSBEiJ_P0024352 protein_coding protein_coding MGP_WSBEiJ_T0024353.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39967444 39979201 - protein_coding retained_intron MGP_WSBEiJ_T0024354.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39969124 40140341 - MGP_WSBEiJ_P0024354 protein_coding protein_coding MGP_WSBEiJ_T0024355.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39969243 39971934 - protein_coding retained_intron MGP_WSBEiJ_T0024356.1 MGP_WSBEiJ_G0016579.1 mouse_genomes_project 10 39999674 40008416 - protein_coding processed_transcript MGP_WSBEiJ_T0006075.1 MGP_WSBEiJ_G0005071.1 mouse_genomes_project 10 130973529 130978408 + A430046D13Rik lincRNA lincRNA MGP_WSBEiJ_T0023847.1 MGP_WSBEiJ_G0016411.1 mouse_genomes_project 10 6714740 6765955 - MGP_WSBEiJ_P0023847 Samd5 protein_coding protein_coding MGP_WSBEiJ_T0025171.1 MGP_WSBEiJ_G0016788.1 mouse_genomes_project 10 76929127 76930577 - MGP_WSBEiJ_P0025171 Gm10941 protein_coding protein_coding MGP_WSBEiJ_T0012169.1 MGP_WSBEiJ_G0010299.1 mouse_genomes_project 10 55553225 55554059 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012154.1 MGP_WSBEiJ_G0010284.1 mouse_genomes_project 10 21658350 21658965 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026662.1 MGP_WSBEiJ_G0017210.1 mouse_genomes_project 10 129902499 129911553 - MGP_WSBEiJ_P0026662 Nxph4 protein_coding protein_coding MGP_WSBEiJ_T0024209.1 MGP_WSBEiJ_G0016526.1 mouse_genomes_project 10 29634272 30857746 - MGP_WSBEiJ_P0024209 Nkain2 protein_coding protein_coding MGP_WSBEiJ_T0024210.1 MGP_WSBEiJ_G0016526.1 mouse_genomes_project 10 30857185 30857747 - MGP_WSBEiJ_P0024210 Nkain2 protein_coding protein_coding MGP_WSBEiJ_T0026631.1 MGP_WSBEiJ_G0017202.1 mouse_genomes_project 10 129685481 129691667 + MGP_WSBEiJ_P0026631 Arhgap9 protein_coding protein_coding MGP_WSBEiJ_T0024502.1 MGP_WSBEiJ_G0016631.1 mouse_genomes_project 10 52703964 52883482 - MGP_WSBEiJ_P0024502 Man1a protein_coding protein_coding MGP_WSBEiJ_T0024503.1 MGP_WSBEiJ_G0016631.1 mouse_genomes_project 10 52706191 52883395 - MGP_WSBEiJ_P0024503 Man1a protein_coding protein_coding MGP_WSBEiJ_T0024504.1 MGP_WSBEiJ_G0016631.1 mouse_genomes_project 10 52777423 52883395 - Man1a protein_coding retained_intron MGP_WSBEiJ_T0024505.1 MGP_WSBEiJ_G0016631.1 mouse_genomes_project 10 52808962 52883422 - MGP_WSBEiJ_P0024505 Man1a protein_coding protein_coding MGP_WSBEiJ_T0024506.1 MGP_WSBEiJ_G0016631.1 mouse_genomes_project 10 52817098 52883423 - Man1a protein_coding retained_intron MGP_WSBEiJ_T0025628.1 MGP_WSBEiJ_G0016912.1 mouse_genomes_project 10 80803168 80806826 + MGP_WSBEiJ_P0025628 protein_coding protein_coding MGP_WSBEiJ_T0025629.1 MGP_WSBEiJ_G0016912.1 mouse_genomes_project 10 80804197 80806846 + MGP_WSBEiJ_P0025629 protein_coding protein_coding MGP_WSBEiJ_T0098838.1 MGP_WSBEiJ_G0037501.1 mouse_genomes_project 10 21392480 21393459 - Gm23130 snoRNA snoRNA MGP_WSBEiJ_T0005991.1 MGP_WSBEiJ_G0005013.1 mouse_genomes_project 10 19166228 19187439 + Gm5420 lincRNA lincRNA MGP_WSBEiJ_T0005992.1 MGP_WSBEiJ_G0005013.1 mouse_genomes_project 10 19170639 19172271 + Gm5420 lincRNA lincRNA MGP_WSBEiJ_T0098875.1 MGP_WSBEiJ_G0037538.1 mouse_genomes_project 10 109676563 109676697 + Gm23105 snoRNA snoRNA MGP_WSBEiJ_T0024685.1 MGP_WSBEiJ_G0016684.1 mouse_genomes_project 10 60553789 60600233 - MGP_WSBEiJ_P0024685 H2afy2 protein_coding protein_coding MGP_WSBEiJ_T0026896.1 MGP_WSBEiJ_G0017313.1 mouse_genomes_project 10 132682943 132683885 + MGP_WSBEiJ_P0026896 Olfr822 protein_coding protein_coding MGP_WSBEiJ_T0012152.1 MGP_WSBEiJ_G0010282.1 mouse_genomes_project 10 19618787 19619727 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026727.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130642251 130657502 + MGP_WSBEiJ_P0026727 Gls2 protein_coding protein_coding MGP_WSBEiJ_T0026728.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130642442 130646864 + MGP_WSBEiJ_P0026728 Gls2 protein_coding protein_coding MGP_WSBEiJ_T0026729.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130642524 130657497 + MGP_WSBEiJ_P0026729 Gls2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026730.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130642527 130647241 + Gls2 protein_coding processed_transcript MGP_WSBEiJ_T0026731.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130642531 130657567 + MGP_WSBEiJ_P0026731 Gls2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026732.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130642553 130657497 + MGP_WSBEiJ_P0026732 Gls2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026733.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130642611 130647399 + Gls2 protein_coding retained_intron MGP_WSBEiJ_T0026734.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130650818 130651754 + Gls2 protein_coding retained_intron MGP_WSBEiJ_T0026735.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130651245 130654566 + Gls2 protein_coding processed_transcript MGP_WSBEiJ_T0026736.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130651326 130657505 + Gls2 protein_coding retained_intron MGP_WSBEiJ_T0026737.1 MGP_WSBEiJ_G0017232.1 mouse_genomes_project 10 130654487 130657293 + MGP_WSBEiJ_P0026737 Gls2 protein_coding protein_coding MGP_WSBEiJ_T0025243.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763274 77778823 - MGP_WSBEiJ_P0025243 Aire protein_coding protein_coding MGP_WSBEiJ_T0025244.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763274 77778823 - MGP_WSBEiJ_P0025244 Aire protein_coding protein_coding MGP_WSBEiJ_T0025245.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763274 77778823 - MGP_WSBEiJ_P0025245 Aire protein_coding protein_coding MGP_WSBEiJ_T0025246.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763275 77773509 - Aire protein_coding retained_intron MGP_WSBEiJ_T0025247.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763275 77778853 - MGP_WSBEiJ_P0025247 Aire protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025248.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763283 77778823 - MGP_WSBEiJ_P0025248 Aire protein_coding protein_coding MGP_WSBEiJ_T0025249.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763283 77778823 - MGP_WSBEiJ_P0025249 Aire protein_coding protein_coding MGP_WSBEiJ_T0025250.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763283 77778823 - MGP_WSBEiJ_P0025250 Aire protein_coding protein_coding MGP_WSBEiJ_T0025251.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763283 77778823 - MGP_WSBEiJ_P0025251 Aire protein_coding protein_coding MGP_WSBEiJ_T0025252.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763283 77778823 - MGP_WSBEiJ_P0025252 Aire protein_coding protein_coding MGP_WSBEiJ_T0025253.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763283 77778823 - MGP_WSBEiJ_P0025253 Aire protein_coding protein_coding MGP_WSBEiJ_T0025254.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763283 77778823 - MGP_WSBEiJ_P0025254 Aire protein_coding protein_coding MGP_WSBEiJ_T0025255.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763323 77778823 - MGP_WSBEiJ_P0025255 Aire protein_coding protein_coding MGP_WSBEiJ_T0025256.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77763323 77778815 - MGP_WSBEiJ_P0025256 Aire protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025257.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77765730 77773511 - Aire protein_coding retained_intron MGP_WSBEiJ_T0025258.1 MGP_WSBEiJ_G0016807.1 mouse_genomes_project 10 77771623 77776960 - Aire protein_coding retained_intron MGP_WSBEiJ_T0023815.1 MGP_WSBEiJ_G0016401.1 mouse_genomes_project 10 4683995 4698375 + MGP_WSBEiJ_P0023815 Nup43 protein_coding protein_coding MGP_WSBEiJ_T0023816.1 MGP_WSBEiJ_G0016401.1 mouse_genomes_project 10 4684006 4684784 + Nup43 protein_coding retained_intron MGP_WSBEiJ_T0023817.1 MGP_WSBEiJ_G0016401.1 mouse_genomes_project 10 4684032 4695574 + Nup43 protein_coding retained_intron MGP_WSBEiJ_T0023818.1 MGP_WSBEiJ_G0016401.1 mouse_genomes_project 10 4689036 4694748 + Nup43 protein_coding retained_intron MGP_WSBEiJ_T0025299.1 MGP_WSBEiJ_G0016827.1 mouse_genomes_project 10 78743137 78761539 + MGP_WSBEiJ_P0025299 Olfr1353 protein_coding protein_coding MGP_WSBEiJ_T0025300.1 MGP_WSBEiJ_G0016827.1 mouse_genomes_project 10 78743151 78760861 + MGP_WSBEiJ_P0025300 Olfr1353 protein_coding protein_coding MGP_WSBEiJ_T0025301.1 MGP_WSBEiJ_G0016827.1 mouse_genomes_project 10 78760524 78761539 + MGP_WSBEiJ_P0025301 Olfr1353 protein_coding protein_coding MGP_WSBEiJ_T0026802.1 MGP_WSBEiJ_G0017257.1 mouse_genomes_project 10 131116968 131133148 - MGP_WSBEiJ_P0026802 Ikzf4 protein_coding protein_coding MGP_WSBEiJ_T0026803.1 MGP_WSBEiJ_G0017257.1 mouse_genomes_project 10 131118534 131133127 - MGP_WSBEiJ_P0026803 Ikzf4 protein_coding protein_coding MGP_WSBEiJ_T0026804.1 MGP_WSBEiJ_G0017257.1 mouse_genomes_project 10 131118587 131133145 - MGP_WSBEiJ_P0026804 Ikzf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026805.1 MGP_WSBEiJ_G0017257.1 mouse_genomes_project 10 131119832 131131949 - MGP_WSBEiJ_P0026805 Ikzf4 protein_coding protein_coding MGP_WSBEiJ_T0026806.1 MGP_WSBEiJ_G0017257.1 mouse_genomes_project 10 131127560 131133097 - MGP_WSBEiJ_P0026806 Ikzf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026807.1 MGP_WSBEiJ_G0017257.1 mouse_genomes_project 10 131128476 131133091 - MGP_WSBEiJ_P0026807 Ikzf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026808.1 MGP_WSBEiJ_G0017257.1 mouse_genomes_project 10 131128502 131133108 - MGP_WSBEiJ_P0026808 Ikzf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026809.1 MGP_WSBEiJ_G0017257.1 mouse_genomes_project 10 131131738 131133127 - Ikzf4 protein_coding processed_transcript MGP_WSBEiJ_T0024821.1 MGP_WSBEiJ_G0016716.1 mouse_genomes_project 10 66102370 66198362 - MGP_WSBEiJ_P0024821 Reep3 protein_coding protein_coding MGP_WSBEiJ_T0026150.1 MGP_WSBEiJ_G0017037.1 mouse_genomes_project 10 93739381 93823381 + MGP_WSBEiJ_P0026150 Cdk17 protein_coding protein_coding MGP_WSBEiJ_T0023749.1 MGP_WSBEiJ_G0016391.1 mouse_genomes_project 10 2840085 2846526 - MGP_WSBEiJ_P0023749 Fbxo5 protein_coding protein_coding MGP_WSBEiJ_T0023750.1 MGP_WSBEiJ_G0016391.1 mouse_genomes_project 10 2843125 2845526 - Fbxo5 protein_coding processed_transcript MGP_WSBEiJ_T0098854.1 MGP_WSBEiJ_G0037517.1 mouse_genomes_project 10 50614278 50614406 + Gm23906 snoRNA snoRNA MGP_WSBEiJ_T0003033.1 MGP_WSBEiJ_G0002829.1 mouse_genomes_project 10 123905637 123907007 + C030027H14Rik antisense antisense MGP_WSBEiJ_T0025711.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81305684 81334054 + MGP_WSBEiJ_P0025711 Pip5k1c protein_coding protein_coding MGP_WSBEiJ_T0025712.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81305709 81323138 + MGP_WSBEiJ_P0025712 Pip5k1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025713.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81305725 81334054 + MGP_WSBEiJ_P0025713 Pip5k1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025714.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81305726 81334055 + MGP_WSBEiJ_P0025714 Pip5k1c protein_coding protein_coding MGP_WSBEiJ_T0025715.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81305780 81334062 + MGP_WSBEiJ_P0025715 Pip5k1c protein_coding protein_coding MGP_WSBEiJ_T0025716.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81324695 81327448 + MGP_WSBEiJ_P0025716 Pip5k1c protein_coding protein_coding MGP_WSBEiJ_T0025717.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81327370 81332227 + MGP_WSBEiJ_P0025717 Pip5k1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025718.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81327505 81332101 + MGP_WSBEiJ_P0025718 Pip5k1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0025719.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81327995 81329881 + Pip5k1c protein_coding retained_intron MGP_WSBEiJ_T0025720.1 MGP_WSBEiJ_G0016939.1 mouse_genomes_project 10 81330922 81332094 + Pip5k1c protein_coding retained_intron MGP_WSBEiJ_T0009000.1 MGP_WSBEiJ_G0007244.1 mouse_genomes_project 8 92476537 92484556 + Irx3os lincRNA lincRNA MGP_WSBEiJ_T0009001.1 MGP_WSBEiJ_G0007244.1 mouse_genomes_project 8 92478297 92482232 + Irx3os lincRNA lincRNA MGP_WSBEiJ_T0011527.1 MGP_WSBEiJ_G0009684.1 mouse_genomes_project 8 107740188 107740448 - Gm27956 misc_RNA misc_RNA MGP_WSBEiJ_T0087493.1 MGP_WSBEiJ_G0032741.1 mouse_genomes_project 8 53909441 53919032 - MGP_WSBEiJ_P0087493 Spcs3 protein_coding protein_coding MGP_WSBEiJ_T0087808.1 MGP_WSBEiJ_G0032829.1 mouse_genomes_project 8 70168177 70178590 + MGP_WSBEiJ_P0087808 Cope protein_coding protein_coding MGP_WSBEiJ_T0087809.1 MGP_WSBEiJ_G0032829.1 mouse_genomes_project 8 70168400 70172077 + Cope protein_coding retained_intron MGP_WSBEiJ_T0087810.1 MGP_WSBEiJ_G0032829.1 mouse_genomes_project 8 70168428 70178593 + Cope protein_coding retained_intron MGP_WSBEiJ_T0087811.1 MGP_WSBEiJ_G0032829.1 mouse_genomes_project 8 70168432 70176131 + MGP_WSBEiJ_P0087811 Cope protein_coding protein_coding MGP_WSBEiJ_T0087812.1 MGP_WSBEiJ_G0032829.1 mouse_genomes_project 8 70168452 70172576 + Cope protein_coding retained_intron MGP_WSBEiJ_T0087813.1 MGP_WSBEiJ_G0032829.1 mouse_genomes_project 8 70168455 70178372 + MGP_WSBEiJ_P0087813 Cope protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087814.1 MGP_WSBEiJ_G0032829.1 mouse_genomes_project 8 70171357 70178590 + MGP_WSBEiJ_P0087814 Cope protein_coding protein_coding MGP_WSBEiJ_T0087815.1 MGP_WSBEiJ_G0032829.1 mouse_genomes_project 8 70174167 70178590 + MGP_WSBEiJ_P0087815 Cope protein_coding protein_coding MGP_WSBEiJ_T0088440.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85496473 85503819 - Wdr83 protein_coding retained_intron MGP_WSBEiJ_T0088441.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85496473 85503748 - Wdr83 protein_coding retained_intron MGP_WSBEiJ_T0088442.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85496473 85503862 - MGP_WSBEiJ_P0088442 Wdr83 protein_coding protein_coding MGP_WSBEiJ_T0088443.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85496474 85503031 - Wdr83 protein_coding retained_intron MGP_WSBEiJ_T0088444.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85496475 85497546 - MGP_WSBEiJ_P0088444 Wdr83 protein_coding protein_coding MGP_WSBEiJ_T0088445.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85496476 85497730 - Wdr83 protein_coding retained_intron MGP_WSBEiJ_T0088446.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85496490 85506897 - Wdr83 protein_coding retained_intron MGP_WSBEiJ_T0088447.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85497266 85503789 - MGP_WSBEiJ_P0088447 Wdr83 protein_coding protein_coding MGP_WSBEiJ_T0088448.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85497562 85503790 - MGP_WSBEiJ_P0088448 Wdr83 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088449.1 MGP_WSBEiJ_G0033022.1 mouse_genomes_project 8 85502810 85503785 - Wdr83 protein_coding retained_intron MGP_WSBEiJ_T0005300.1 MGP_WSBEiJ_G0004490.1 mouse_genomes_project 8 106175649 106187606 + 1700082M22Rik antisense antisense MGP_WSBEiJ_T0005301.1 MGP_WSBEiJ_G0004490.1 mouse_genomes_project 8 106181684 106187466 + 1700082M22Rik antisense antisense MGP_WSBEiJ_T0005278.1 MGP_WSBEiJ_G0004471.1 mouse_genomes_project 8 56731372 56734596 - Gm28063 antisense antisense MGP_WSBEiJ_T0005279.1 MGP_WSBEiJ_G0004471.1 mouse_genomes_project 8 56731390 56734596 - Gm28063 antisense antisense MGP_WSBEiJ_T0087976.1 MGP_WSBEiJ_G0032880.1 mouse_genomes_project 8 71442522 71443345 + MGP_WSBEiJ_P0087976 Sfn protein_coding protein_coding MGP_WSBEiJ_T0086992.1 MGP_WSBEiJ_G0032586.1 mouse_genomes_project 8 20518571 20537739 - MGP_WSBEiJ_P0086992 protein_coding protein_coding MGP_WSBEiJ_T0010801.1 MGP_WSBEiJ_G0008958.1 mouse_genomes_project 8 84526304 84526393 - Mir181c miRNA miRNA MGP_WSBEiJ_T0015476.1 MGP_WSBEiJ_G0013606.1 mouse_genomes_project 8 78593042 78597037 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010809.1 MGP_WSBEiJ_G0008966.1 mouse_genomes_project 8 85537128 85537185 - Gm23388 miRNA miRNA MGP_WSBEiJ_T0010804.1 MGP_WSBEiJ_G0008961.1 mouse_genomes_project 8 84557052 84557159 + Mir24-2 miRNA miRNA MGP_WSBEiJ_T0086895.1 MGP_WSBEiJ_G0032531.1 mouse_genomes_project 8 12419276 12441584 + MGP_WSBEiJ_P0086895 Kbtbd11 protein_coding protein_coding MGP_WSBEiJ_T0086896.1 MGP_WSBEiJ_G0032531.1 mouse_genomes_project 8 12419567 12435344 + Kbtbd11 protein_coding processed_transcript MGP_WSBEiJ_T0086897.1 MGP_WSBEiJ_G0032531.1 mouse_genomes_project 8 12435540 12441584 + MGP_WSBEiJ_P0086897 Kbtbd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086898.1 MGP_WSBEiJ_G0032531.1 mouse_genomes_project 8 12440640 12441215 + Kbtbd11 protein_coding processed_transcript MGP_WSBEiJ_T0089069.1 MGP_WSBEiJ_G0033253.1 mouse_genomes_project 8 112654112 112675146 + MGP_WSBEiJ_P0089069 Mtss1l protein_coding protein_coding MGP_WSBEiJ_T0089070.1 MGP_WSBEiJ_G0033253.1 mouse_genomes_project 8 112658231 112673681 + MGP_WSBEiJ_P0089070 Mtss1l protein_coding protein_coding MGP_WSBEiJ_T0089071.1 MGP_WSBEiJ_G0033253.1 mouse_genomes_project 8 112658898 112664490 + Mtss1l protein_coding processed_transcript MGP_WSBEiJ_T0089072.1 MGP_WSBEiJ_G0033253.1 mouse_genomes_project 8 112659827 112671399 + MGP_WSBEiJ_P0089072 Mtss1l protein_coding protein_coding MGP_WSBEiJ_T0089073.1 MGP_WSBEiJ_G0033253.1 mouse_genomes_project 8 112659838 112671819 + MGP_WSBEiJ_P0089073 Mtss1l protein_coding protein_coding MGP_WSBEiJ_T0089074.1 MGP_WSBEiJ_G0033253.1 mouse_genomes_project 8 112670862 112672127 + Mtss1l protein_coding retained_intron MGP_WSBEiJ_T0087978.1 MGP_WSBEiJ_G0032882.1 mouse_genomes_project 8 71464935 71471976 + MGP_WSBEiJ_P0087978 Mvb12a protein_coding protein_coding MGP_WSBEiJ_T0089215.1 MGP_WSBEiJ_G0033298.1 mouse_genomes_project 8 119386691 119478048 - MGP_WSBEiJ_P0089215 Pkd1l2 protein_coding protein_coding MGP_WSBEiJ_T0089216.1 MGP_WSBEiJ_G0033298.1 mouse_genomes_project 8 119386691 119478048 - MGP_WSBEiJ_P0089216 Pkd1l2 protein_coding protein_coding MGP_WSBEiJ_T0089217.1 MGP_WSBEiJ_G0033298.1 mouse_genomes_project 8 119395204 119410551 - Pkd1l2 protein_coding retained_intron MGP_WSBEiJ_T0089218.1 MGP_WSBEiJ_G0033298.1 mouse_genomes_project 8 119410005 119416333 - Pkd1l2 protein_coding retained_intron MGP_WSBEiJ_T0086580.1 MGP_WSBEiJ_G0032437.1 mouse_genomes_project 8 408408 412464 + MGP_WSBEiJ_P0086580 Zfp358 protein_coding protein_coding MGP_WSBEiJ_T0097115.1 MGP_WSBEiJ_G0035796.1 mouse_genomes_project 8 72081032 72081119 + Gm24747 rRNA rRNA MGP_WSBEiJ_T0088370.1 MGP_WSBEiJ_G0033005.1 mouse_genomes_project 8 85272796 85295950 + MGP_WSBEiJ_P0088370 Syce2 protein_coding protein_coding MGP_WSBEiJ_T0088371.1 MGP_WSBEiJ_G0033005.1 mouse_genomes_project 8 85272796 85296715 + MGP_WSBEiJ_P0088371 Syce2 protein_coding protein_coding MGP_WSBEiJ_T0088372.1 MGP_WSBEiJ_G0033005.1 mouse_genomes_project 8 85272875 85295960 + MGP_WSBEiJ_P0088372 Syce2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088373.1 MGP_WSBEiJ_G0033005.1 mouse_genomes_project 8 85273120 85294485 + Syce2 protein_coding retained_intron MGP_WSBEiJ_T0096857.1 MGP_WSBEiJ_G0035538.1 mouse_genomes_project 8 95880385 95887210 - pseudogene pseudogene MGP_WSBEiJ_T0089564.1 MGP_WSBEiJ_G0033397.1 mouse_genomes_project 8 127097936 127213172 + MGP_WSBEiJ_P0089564 Galnt2 protein_coding protein_coding MGP_WSBEiJ_T0089565.1 MGP_WSBEiJ_G0033397.1 mouse_genomes_project 8 127098046 127201713 + Galnt2 protein_coding processed_transcript MGP_WSBEiJ_T0089566.1 MGP_WSBEiJ_G0033397.1 mouse_genomes_project 8 127161893 127190536 + Galnt2 protein_coding processed_transcript MGP_WSBEiJ_T0089567.1 MGP_WSBEiJ_G0033397.1 mouse_genomes_project 8 127162156 127213174 + Galnt2 protein_coding processed_transcript MGP_WSBEiJ_T0097468.1 MGP_WSBEiJ_G0036137.1 mouse_genomes_project 8 67593122 67593512 - sense_intronic sense_intronic MGP_WSBEiJ_T0088693.1 MGP_WSBEiJ_G0033102.1 mouse_genomes_project 8 95774676 95787169 - MGP_WSBEiJ_P0088693 Dok4 protein_coding protein_coding MGP_WSBEiJ_T0005291.1 MGP_WSBEiJ_G0004482.1 mouse_genomes_project 8 77564744 77567089 + 0610038B21Rik antisense antisense MGP_WSBEiJ_T0005292.1 MGP_WSBEiJ_G0004482.1 mouse_genomes_project 8 77566624 77573422 + 0610038B21Rik antisense antisense MGP_WSBEiJ_T0088288.1 MGP_WSBEiJ_G0032990.1 mouse_genomes_project 8 84604511 84611926 - MGP_WSBEiJ_P0088288 Mri1 protein_coding protein_coding MGP_WSBEiJ_T0088289.1 MGP_WSBEiJ_G0032990.1 mouse_genomes_project 8 84605626 84611015 - MGP_WSBEiJ_P0088289 Mri1 protein_coding protein_coding MGP_WSBEiJ_T0088290.1 MGP_WSBEiJ_G0032990.1 mouse_genomes_project 8 84608520 84611849 - MGP_WSBEiJ_P0088290 Mri1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088291.1 MGP_WSBEiJ_G0032990.1 mouse_genomes_project 8 84608834 84611928 - Mri1 protein_coding processed_transcript MGP_WSBEiJ_T0088292.1 MGP_WSBEiJ_G0032990.1 mouse_genomes_project 8 84610391 84611928 - Mri1 protein_coding retained_intron MGP_WSBEiJ_T0087276.1 MGP_WSBEiJ_G0032683.1 mouse_genomes_project 8 39244612 39303828 + MGP_WSBEiJ_P0087276 Zdhhc2 protein_coding protein_coding MGP_WSBEiJ_T0087277.1 MGP_WSBEiJ_G0032683.1 mouse_genomes_project 8 39244618 39330730 + MGP_WSBEiJ_P0087277 Zdhhc2 protein_coding protein_coding MGP_WSBEiJ_T0087278.1 MGP_WSBEiJ_G0032683.1 mouse_genomes_project 8 39244619 39288484 + Zdhhc2 protein_coding retained_intron MGP_WSBEiJ_T0087279.1 MGP_WSBEiJ_G0032683.1 mouse_genomes_project 8 39244637 39302362 + MGP_WSBEiJ_P0087279 Zdhhc2 protein_coding protein_coding MGP_WSBEiJ_T0087280.1 MGP_WSBEiJ_G0032683.1 mouse_genomes_project 8 39245301 39276826 + Zdhhc2 protein_coding processed_transcript MGP_WSBEiJ_T0087288.1 MGP_WSBEiJ_G0032683.1 mouse_genomes_project 8 39321015 39330732 + Zdhhc2 protein_coding processed_transcript MGP_WSBEiJ_T0087033.1 MGP_WSBEiJ_G0032596.1 mouse_genomes_project 8 21210772 21221636 - MGP_WSBEiJ_P0087033 Gins4 protein_coding protein_coding MGP_WSBEiJ_T0005310.1 MGP_WSBEiJ_G0004497.1 mouse_genomes_project 8 112747604 112749444 + Gm15895 antisense antisense MGP_WSBEiJ_T0089424.1 MGP_WSBEiJ_G0033355.1 mouse_genomes_project 8 125247968 125259679 - MGP_WSBEiJ_P0089424 Rnf166 protein_coding protein_coding MGP_WSBEiJ_T0089425.1 MGP_WSBEiJ_G0033355.1 mouse_genomes_project 8 125248683 125250049 - Rnf166 protein_coding retained_intron MGP_WSBEiJ_T0089426.1 MGP_WSBEiJ_G0033355.1 mouse_genomes_project 8 125249830 125259303 - Rnf166 protein_coding processed_transcript MGP_WSBEiJ_T0011528.1 MGP_WSBEiJ_G0009685.1 mouse_genomes_project 8 112430507 112430798 + Gm22701 misc_RNA misc_RNA MGP_WSBEiJ_T0011515.1 MGP_WSBEiJ_G0009672.1 mouse_genomes_project 8 24383462 24383722 - Gm22227 misc_RNA misc_RNA MGP_WSBEiJ_T0089606.1 MGP_WSBEiJ_G0033410.1 mouse_genomes_project 8 127792632 127798536 + MGP_WSBEiJ_P0089606 Sprtn protein_coding protein_coding MGP_WSBEiJ_T0088770.1 MGP_WSBEiJ_G0033131.1 mouse_genomes_project 8 105710051 105734312 - MGP_WSBEiJ_P0088770 Tk2 protein_coding protein_coding MGP_WSBEiJ_T0087384.1 MGP_WSBEiJ_G0032709.1 mouse_genomes_project 8 44958186 44967724 + MGP_WSBEiJ_P0087384 protein_coding protein_coding MGP_WSBEiJ_T0087385.1 MGP_WSBEiJ_G0032709.1 mouse_genomes_project 8 44958272 44965079 + MGP_WSBEiJ_P0087385 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005306.1 MGP_WSBEiJ_G0004494.1 mouse_genomes_project 8 110730156 110736578 - antisense antisense MGP_WSBEiJ_T0087900.1 MGP_WSBEiJ_G0032859.1 mouse_genomes_project 8 70750833 70766770 - MGP_WSBEiJ_P0087900 Kcnn1 protein_coding protein_coding MGP_WSBEiJ_T0087901.1 MGP_WSBEiJ_G0032859.1 mouse_genomes_project 8 70750833 70766770 - MGP_WSBEiJ_P0087901 Kcnn1 protein_coding protein_coding MGP_WSBEiJ_T0087902.1 MGP_WSBEiJ_G0032859.1 mouse_genomes_project 8 70751956 70773901 - MGP_WSBEiJ_P0087902 Kcnn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0015438.1 MGP_WSBEiJ_G0013568.1 mouse_genomes_project 8 7988853 7989294 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088274.1 MGP_WSBEiJ_G0032983.1 mouse_genomes_project 8 84442712 84451099 - MGP_WSBEiJ_P0088274 Dcaf15 protein_coding protein_coding MGP_WSBEiJ_T0088275.1 MGP_WSBEiJ_G0032983.1 mouse_genomes_project 8 84443090 84451167 - MGP_WSBEiJ_P0088275 Dcaf15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0008944.1 MGP_WSBEiJ_G0007199.1 mouse_genomes_project 8 32692008 32701358 + Gm29243 lincRNA lincRNA MGP_WSBEiJ_T0088515.1 MGP_WSBEiJ_G0033044.1 mouse_genomes_project 8 88659461 88694122 + MGP_WSBEiJ_P0088515 Heatr3 protein_coding protein_coding MGP_WSBEiJ_T0088516.1 MGP_WSBEiJ_G0033044.1 mouse_genomes_project 8 88680235 88681916 + Heatr3 protein_coding retained_intron MGP_WSBEiJ_T0088517.1 MGP_WSBEiJ_G0033044.1 mouse_genomes_project 8 88684704 88695184 + Heatr3 protein_coding retained_intron MGP_WSBEiJ_T0088518.1 MGP_WSBEiJ_G0033044.1 mouse_genomes_project 8 88687664 88690203 + Heatr3 protein_coding retained_intron MGP_WSBEiJ_T0086944.1 MGP_WSBEiJ_G0032555.1 mouse_genomes_project 8 18737667 18742734 + MGP_WSBEiJ_P0086944 Defb33 protein_coding protein_coding MGP_WSBEiJ_T0088418.1 MGP_WSBEiJ_G0033017.1 mouse_genomes_project 8 85443700 85447149 + MGP_WSBEiJ_P0088418 2310036O22Rik protein_coding protein_coding MGP_WSBEiJ_T0098575.1 MGP_WSBEiJ_G0037238.1 mouse_genomes_project 8 131752805 131752912 + Gm26002 snRNA snRNA MGP_WSBEiJ_T0089213.1 MGP_WSBEiJ_G0033297.1 mouse_genomes_project 8 119371521 119384553 - MGP_WSBEiJ_P0089213 Gcsh protein_coding protein_coding MGP_WSBEiJ_T0089214.1 MGP_WSBEiJ_G0033297.1 mouse_genomes_project 8 119374901 119382382 - Gcsh protein_coding processed_transcript MGP_WSBEiJ_T0087868.1 MGP_WSBEiJ_G0032841.1 mouse_genomes_project 8 70416276 70471038 + MGP_WSBEiJ_P0087868 Ell protein_coding protein_coding MGP_WSBEiJ_T0005275.1 MGP_WSBEiJ_G0004468.1 mouse_genomes_project 8 45189029 45192511 + Gm15634 antisense antisense MGP_WSBEiJ_T0087441.1 MGP_WSBEiJ_G0032723.1 mouse_genomes_project 8 46061881 46106063 + Enpp6 protein_coding retained_intron MGP_WSBEiJ_T0087442.1 MGP_WSBEiJ_G0032723.1 mouse_genomes_project 8 46061883 46170642 + Enpp6 protein_coding retained_intron MGP_WSBEiJ_T0087443.1 MGP_WSBEiJ_G0032723.1 mouse_genomes_project 8 46061883 46170642 + MGP_WSBEiJ_P0087443 Enpp6 protein_coding protein_coding MGP_WSBEiJ_T0087444.1 MGP_WSBEiJ_G0032723.1 mouse_genomes_project 8 46061910 46161742 + MGP_WSBEiJ_P0087444 Enpp6 protein_coding protein_coding MGP_WSBEiJ_T0087445.1 MGP_WSBEiJ_G0032723.1 mouse_genomes_project 8 46147861 46162426 + MGP_WSBEiJ_P0087445 Enpp6 protein_coding protein_coding MGP_WSBEiJ_T0086989.1 MGP_WSBEiJ_G0032584.1 mouse_genomes_project 8 20406128 20420394 - MGP_WSBEiJ_P0086989 Smim19 protein_coding protein_coding MGP_WSBEiJ_T0086990.1 MGP_WSBEiJ_G0032584.1 mouse_genomes_project 8 20406128 20420394 - MGP_WSBEiJ_P0086990 Smim19 protein_coding protein_coding MGP_WSBEiJ_T0089030.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111448167 111463861 - MGP_WSBEiJ_P0089030 Dhodh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089031.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111450070 111450879 - Dhodh protein_coding processed_transcript MGP_WSBEiJ_T0089032.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111450296 111465998 - MGP_WSBEiJ_P0089032 Dhodh protein_coding protein_coding MGP_WSBEiJ_T0089033.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111450300 111466249 - MGP_WSBEiJ_P0089033 Dhodh protein_coding protein_coding MGP_WSBEiJ_T0089034.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111450724 111453110 - Dhodh protein_coding retained_intron MGP_WSBEiJ_T0089035.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111450796 111451778 - Dhodh protein_coding retained_intron MGP_WSBEiJ_T0089036.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111450873 111458183 - Dhodh protein_coding retained_intron MGP_WSBEiJ_T0089037.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111452857 111465992 - MGP_WSBEiJ_P0089037 Dhodh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089038.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111457988 111466046 - Dhodh protein_coding retained_intron MGP_WSBEiJ_T0089039.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111458002 111466046 - Dhodh protein_coding retained_intron MGP_WSBEiJ_T0089040.1 MGP_WSBEiJ_G0033236.1 mouse_genomes_project 8 111459974 111466299 - MGP_WSBEiJ_P0089040 Dhodh protein_coding protein_coding MGP_WSBEiJ_T0099762.1 MGP_WSBEiJ_G0038425.1 mouse_genomes_project 8 11243091 11243221 + Gm24698 snoRNA snoRNA MGP_WSBEiJ_T0008923.1 MGP_WSBEiJ_G0007185.1 mouse_genomes_project 8 10519308 10528058 + 2810030D12Rik lincRNA lincRNA MGP_WSBEiJ_T0008924.1 MGP_WSBEiJ_G0007185.1 mouse_genomes_project 8 10519316 10528070 + 2810030D12Rik lincRNA lincRNA MGP_WSBEiJ_T0008925.1 MGP_WSBEiJ_G0007185.1 mouse_genomes_project 8 10519340 10520379 + 2810030D12Rik lincRNA lincRNA MGP_WSBEiJ_T0008926.1 MGP_WSBEiJ_G0007185.1 mouse_genomes_project 8 10519408 10528063 + 2810030D12Rik lincRNA lincRNA MGP_WSBEiJ_T0088388.1 MGP_WSBEiJ_G0033009.1 mouse_genomes_project 8 85322187 85334220 - Mast1 protein_coding retained_intron MGP_WSBEiJ_T0088389.1 MGP_WSBEiJ_G0033009.1 mouse_genomes_project 8 85322189 85348191 - MGP_WSBEiJ_P0088389 Mast1 protein_coding protein_coding MGP_WSBEiJ_T0088390.1 MGP_WSBEiJ_G0033009.1 mouse_genomes_project 8 85322267 85356885 - MGP_WSBEiJ_P0088390 Mast1 protein_coding protein_coding MGP_WSBEiJ_T0088392.1 MGP_WSBEiJ_G0033009.1 mouse_genomes_project 8 85331624 85335822 - Mast1 protein_coding retained_intron MGP_WSBEiJ_T0088393.1 MGP_WSBEiJ_G0033009.1 mouse_genomes_project 8 85333834 85338820 - Mast1 protein_coding retained_intron MGP_WSBEiJ_T0088394.1 MGP_WSBEiJ_G0033009.1 mouse_genomes_project 8 85345754 85348176 - Mast1 protein_coding retained_intron MGP_WSBEiJ_T0099770.1 MGP_WSBEiJ_G0038433.1 mouse_genomes_project 8 21281099 21281231 - Gm24335 snoRNA snoRNA MGP_WSBEiJ_T0088666.1 MGP_WSBEiJ_G0033095.1 mouse_genomes_project 8 95580331 95602448 - MGP_WSBEiJ_P0088666 Pllp protein_coding protein_coding MGP_WSBEiJ_T0099785.1 MGP_WSBEiJ_G0038448.1 mouse_genomes_project 8 60357629 60357737 - Gm23329 snoRNA snoRNA MGP_WSBEiJ_T0087241.1 MGP_WSBEiJ_G0032669.1 mouse_genomes_project 8 34043227 34067352 - MGP_WSBEiJ_P0087241 Eri1 protein_coding protein_coding MGP_WSBEiJ_T0086633.1 MGP_WSBEiJ_G0032453.1 mouse_genomes_project 8 802952 810503 - MGP_WSBEiJ_P0086633 Cd209d protein_coding protein_coding MGP_WSBEiJ_T0099792.1 MGP_WSBEiJ_G0038455.1 mouse_genomes_project 8 67799266 67799397 + Gm22018 snoRNA snoRNA MGP_WSBEiJ_T0086842.1 MGP_WSBEiJ_G0032515.1 mouse_genomes_project 8 10896552 10908303 - MGP_WSBEiJ_P0086842 1700029H14Rik protein_coding protein_coding MGP_WSBEiJ_T0086843.1 MGP_WSBEiJ_G0032515.1 mouse_genomes_project 8 10896552 10908290 - MGP_WSBEiJ_P0086843 1700029H14Rik protein_coding protein_coding MGP_WSBEiJ_T0086844.1 MGP_WSBEiJ_G0032515.1 mouse_genomes_project 8 10896830 10908247 - MGP_WSBEiJ_P0086844 1700029H14Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086845.1 MGP_WSBEiJ_G0032515.1 mouse_genomes_project 8 10896851 10908246 - MGP_WSBEiJ_P0086845 1700029H14Rik protein_coding protein_coding MGP_WSBEiJ_T0086846.1 MGP_WSBEiJ_G0032515.1 mouse_genomes_project 8 10901776 10908247 - MGP_WSBEiJ_P0086846 1700029H14Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0015470.1 MGP_WSBEiJ_G0013600.1 mouse_genomes_project 8 72411800 72412203 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015478.1 MGP_WSBEiJ_G0013608.1 mouse_genomes_project 8 79857361 79858304 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087036.1 MGP_WSBEiJ_G0032599.1 mouse_genomes_project 8 21648145 21913465 + MGP_WSBEiJ_P0087036 Zmat4 protein_coding protein_coding MGP_WSBEiJ_T0087037.1 MGP_WSBEiJ_G0032599.1 mouse_genomes_project 8 21686580 22100588 + MGP_WSBEiJ_P0087037 Zmat4 protein_coding protein_coding MGP_WSBEiJ_T0087038.1 MGP_WSBEiJ_G0032599.1 mouse_genomes_project 8 21686580 22201361 + MGP_WSBEiJ_P0087038 Zmat4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087039.1 MGP_WSBEiJ_G0032599.1 mouse_genomes_project 8 21719111 21819121 + MGP_WSBEiJ_P0087039 Zmat4 protein_coding protein_coding MGP_WSBEiJ_T0087040.1 MGP_WSBEiJ_G0032599.1 mouse_genomes_project 8 21944162 22042132 + Zmat4 protein_coding retained_intron MGP_WSBEiJ_T0086729.1 MGP_WSBEiJ_G0032486.1 mouse_genomes_project 8 8715451 8732624 + MGP_WSBEiJ_P0086729 Carkd protein_coding protein_coding MGP_WSBEiJ_T0086730.1 MGP_WSBEiJ_G0032486.1 mouse_genomes_project 8 8715512 8734297 + MGP_WSBEiJ_P0086730 Carkd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086731.1 MGP_WSBEiJ_G0032486.1 mouse_genomes_project 8 8715513 8732624 + MGP_WSBEiJ_P0086731 Carkd protein_coding protein_coding MGP_WSBEiJ_T0086732.1 MGP_WSBEiJ_G0032486.1 mouse_genomes_project 8 8715538 8726386 + Carkd protein_coding retained_intron MGP_WSBEiJ_T0086733.1 MGP_WSBEiJ_G0032486.1 mouse_genomes_project 8 8715578 8729573 + Carkd protein_coding retained_intron MGP_WSBEiJ_T0086734.1 MGP_WSBEiJ_G0032486.1 mouse_genomes_project 8 8715598 8732382 + MGP_WSBEiJ_P0086734 Carkd protein_coding protein_coding MGP_WSBEiJ_T0086735.1 MGP_WSBEiJ_G0032486.1 mouse_genomes_project 8 8729298 8732604 + Carkd protein_coding retained_intron MGP_WSBEiJ_T0087168.1 MGP_WSBEiJ_G0032639.1 mouse_genomes_project 8 25583322 25620039 + MGP_WSBEiJ_P0087168 Chrnb3 protein_coding protein_coding MGP_WSBEiJ_T0098541.1 MGP_WSBEiJ_G0037204.1 mouse_genomes_project 8 52841994 52842056 + Gm22841 snRNA snRNA MGP_WSBEiJ_T0088545.1 MGP_WSBEiJ_G0033053.1 mouse_genomes_project 8 89743128 89743635 - MGP_WSBEiJ_P0088545 protein_coding protein_coding MGP_WSBEiJ_T0098544.1 MGP_WSBEiJ_G0037207.1 mouse_genomes_project 8 65387175 65387282 - Gm23515 snRNA snRNA MGP_WSBEiJ_T0087741.1 MGP_WSBEiJ_G0032816.1 mouse_genomes_project 8 69920434 69927521 + MGP_WSBEiJ_P0087741 Tm6sf2 protein_coding protein_coding MGP_WSBEiJ_T0087742.1 MGP_WSBEiJ_G0032816.1 mouse_genomes_project 8 69920442 69927507 + MGP_WSBEiJ_P0087742 Tm6sf2 protein_coding protein_coding MGP_WSBEiJ_T0087743.1 MGP_WSBEiJ_G0032816.1 mouse_genomes_project 8 69921794 69923172 + Tm6sf2 protein_coding retained_intron MGP_WSBEiJ_T0087744.1 MGP_WSBEiJ_G0032816.1 mouse_genomes_project 8 69922886 69925591 + Tm6sf2 protein_coding retained_intron MGP_WSBEiJ_T0087745.1 MGP_WSBEiJ_G0032816.1 mouse_genomes_project 8 69924868 69926075 + Tm6sf2 protein_coding retained_intron MGP_WSBEiJ_T0087967.1 MGP_WSBEiJ_G0032878.1 mouse_genomes_project 8 71405078 71410388 + MGP_WSBEiJ_P0087967 Gtpbp3 protein_coding protein_coding MGP_WSBEiJ_T0087968.1 MGP_WSBEiJ_G0032878.1 mouse_genomes_project 8 71405078 71410388 + MGP_WSBEiJ_P0087968 Gtpbp3 protein_coding protein_coding MGP_WSBEiJ_T0087969.1 MGP_WSBEiJ_G0032878.1 mouse_genomes_project 8 71405696 71410388 + MGP_WSBEiJ_P0087969 Gtpbp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087970.1 MGP_WSBEiJ_G0032878.1 mouse_genomes_project 8 71405703 71416391 + MGP_WSBEiJ_P0087970 Gtpbp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087971.1 MGP_WSBEiJ_G0032878.1 mouse_genomes_project 8 71405709 71406555 + Gtpbp3 protein_coding retained_intron MGP_WSBEiJ_T0087972.1 MGP_WSBEiJ_G0032878.1 mouse_genomes_project 8 71405718 71410388 + Gtpbp3 protein_coding retained_intron MGP_WSBEiJ_T0087973.1 MGP_WSBEiJ_G0032878.1 mouse_genomes_project 8 71405726 71410388 + MGP_WSBEiJ_P0087973 Gtpbp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087974.1 MGP_WSBEiJ_G0032878.1 mouse_genomes_project 8 71406435 71408390 + Gtpbp3 protein_coding retained_intron MGP_WSBEiJ_T0086967.1 MGP_WSBEiJ_G0032575.1 mouse_genomes_project 8 19976431 19987334 + MGP_WSBEiJ_P0086967 Alg11 protein_coding protein_coding MGP_WSBEiJ_T0086968.1 MGP_WSBEiJ_G0032575.1 mouse_genomes_project 8 19976432 19987334 + MGP_WSBEiJ_P0086968 Alg11 protein_coding protein_coding MGP_WSBEiJ_T0086969.1 MGP_WSBEiJ_G0032575.1 mouse_genomes_project 8 19976450 19981158 + MGP_WSBEiJ_P0086969 Alg11 protein_coding protein_coding MGP_WSBEiJ_T0086970.1 MGP_WSBEiJ_G0032575.1 mouse_genomes_project 8 19984722 19985586 + Alg11 protein_coding processed_transcript MGP_WSBEiJ_T0086704.1 MGP_WSBEiJ_G0032469.1 mouse_genomes_project 8 1545755 1562375 + MGP_WSBEiJ_P0086704 Zfp958 protein_coding protein_coding MGP_WSBEiJ_T0086705.1 MGP_WSBEiJ_G0032469.1 mouse_genomes_project 8 1558665 1562206 + MGP_WSBEiJ_P0086705 Zfp958 protein_coding protein_coding MGP_WSBEiJ_T0087043.1 MGP_WSBEiJ_G0032602.1 mouse_genomes_project 8 22598417 22621125 - Ido2 protein_coding processed_transcript MGP_WSBEiJ_T0087044.1 MGP_WSBEiJ_G0032602.1 mouse_genomes_project 8 22598977 22642026 - MGP_WSBEiJ_P0087044 Ido2 protein_coding protein_coding MGP_WSBEiJ_T0087045.1 MGP_WSBEiJ_G0032602.1 mouse_genomes_project 8 22599969 22607297 - Ido2 protein_coding retained_intron MGP_WSBEiJ_T0087046.1 MGP_WSBEiJ_G0032602.1 mouse_genomes_project 8 22617940 22621082 - Ido2 protein_coding processed_transcript MGP_WSBEiJ_T0088906.1 MGP_WSBEiJ_G0033191.1 mouse_genomes_project 8 107508056 107530118 + MGP_WSBEiJ_P0088906 Nutf2 protein_coding protein_coding MGP_WSBEiJ_T0088766.1 MGP_WSBEiJ_G0033130.1 mouse_genomes_project 8 105652289 105702453 + MGP_WSBEiJ_P0088766 Bean1 protein_coding protein_coding MGP_WSBEiJ_T0088767.1 MGP_WSBEiJ_G0033130.1 mouse_genomes_project 8 105652289 105702453 + MGP_WSBEiJ_P0088767 Bean1 protein_coding protein_coding MGP_WSBEiJ_T0088768.1 MGP_WSBEiJ_G0033130.1 mouse_genomes_project 8 105652289 105702453 + MGP_WSBEiJ_P0088768 Bean1 protein_coding protein_coding MGP_WSBEiJ_T0088769.1 MGP_WSBEiJ_G0033130.1 mouse_genomes_project 8 105652289 105702453 + MGP_WSBEiJ_P0088769 Bean1 protein_coding protein_coding MGP_WSBEiJ_T0009014.1 MGP_WSBEiJ_G0007251.1 mouse_genomes_project 8 94519233 94581586 - Gm26843 lincRNA lincRNA MGP_WSBEiJ_T0087306.1 MGP_WSBEiJ_G0032689.1 mouse_genomes_project 8 39763985 39778605 + Pdgfrl protein_coding retained_intron MGP_WSBEiJ_T0087307.1 MGP_WSBEiJ_G0032689.1 mouse_genomes_project 8 39764004 39823644 + MGP_WSBEiJ_P0087307 Pdgfrl protein_coding protein_coding MGP_WSBEiJ_T0089169.1 MGP_WSBEiJ_G0033281.1 mouse_genomes_project 8 114086001 114096894 + MGP_WSBEiJ_P0089169 Terf2ip protein_coding protein_coding MGP_WSBEiJ_T0087322.1 MGP_WSBEiJ_G0032691.1 mouse_genomes_project 8 40027068 40049900 - MGP_WSBEiJ_P0087322 Fgl1 protein_coding protein_coding MGP_WSBEiJ_T0087323.1 MGP_WSBEiJ_G0032691.1 mouse_genomes_project 8 40033164 40049897 - Fgl1 protein_coding retained_intron MGP_WSBEiJ_T0087740.1 MGP_WSBEiJ_G0032815.1 mouse_genomes_project 8 69887227 69919454 + MGP_WSBEiJ_P0087740 Sugp1 protein_coding protein_coding MGP_WSBEiJ_T0086658.1 MGP_WSBEiJ_G0032459.1 mouse_genomes_project 8 1141923 1150590 - MGP_WSBEiJ_P0086658 Prr36 protein_coding protein_coding MGP_WSBEiJ_T0086659.1 MGP_WSBEiJ_G0032459.1 mouse_genomes_project 8 1148326 1150190 - MGP_WSBEiJ_P0086659 Prr36 protein_coding protein_coding MGP_WSBEiJ_T0086660.1 MGP_WSBEiJ_G0032459.1 mouse_genomes_project 8 1149249 1150430 - MGP_WSBEiJ_P0086660 Prr36 protein_coding protein_coding MGP_WSBEiJ_T0086661.1 MGP_WSBEiJ_G0032459.1 mouse_genomes_project 8 1149685 1150737 - MGP_WSBEiJ_P0086661 Prr36 protein_coding protein_coding MGP_WSBEiJ_T0096859.1 MGP_WSBEiJ_G0035540.1 mouse_genomes_project 8 119140219 119141555 - pseudogene pseudogene MGP_WSBEiJ_T0089490.1 MGP_WSBEiJ_G0033373.1 mouse_genomes_project 8 126027081 126036396 - MGP_WSBEiJ_P0089490 Chmp1a protein_coding protein_coding MGP_WSBEiJ_T0089491.1 MGP_WSBEiJ_G0033373.1 mouse_genomes_project 8 126028422 126033405 - Chmp1a protein_coding retained_intron MGP_WSBEiJ_T0089492.1 MGP_WSBEiJ_G0033373.1 mouse_genomes_project 8 126033222 126036399 - Chmp1a protein_coding retained_intron MGP_WSBEiJ_T0010766.1 MGP_WSBEiJ_G0008923.1 mouse_genomes_project 8 10450337 10450398 + Mir7065 miRNA miRNA MGP_WSBEiJ_T0015483.1 MGP_WSBEiJ_G0013613.1 mouse_genomes_project 8 82073247 82074861 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088154.1 MGP_WSBEiJ_G0032939.1 mouse_genomes_project 8 79337995 79376151 - MGP_WSBEiJ_P0088154 1700011L22Rik protein_coding protein_coding MGP_WSBEiJ_T0088963.1 MGP_WSBEiJ_G0033213.1 mouse_genomes_project 8 108291718 108362591 + MGP_WSBEiJ_P0088963 Cdh1 protein_coding protein_coding MGP_WSBEiJ_T0088964.1 MGP_WSBEiJ_G0033213.1 mouse_genomes_project 8 108291746 108361707 + MGP_WSBEiJ_P0088964 Cdh1 protein_coding protein_coding MGP_WSBEiJ_T0088965.1 MGP_WSBEiJ_G0033213.1 mouse_genomes_project 8 108292510 108343046 + Cdh1 protein_coding processed_transcript MGP_WSBEiJ_T0005259.1 MGP_WSBEiJ_G0004456.1 mouse_genomes_project 8 13648936 13655240 + Gm16346 antisense antisense MGP_WSBEiJ_T0097472.1 MGP_WSBEiJ_G0036141.1 mouse_genomes_project 8 124684004 124684671 - sense_intronic sense_intronic MGP_WSBEiJ_T0086722.1 MGP_WSBEiJ_G0032482.1 mouse_genomes_project 8 8178349 8199806 - MGP_WSBEiJ_P0086722 Irs2 protein_coding protein_coding MGP_WSBEiJ_T0086821.1 MGP_WSBEiJ_G0032506.1 mouse_genomes_project 8 10490835 10515818 - MGP_WSBEiJ_P0086821 Grtp1 protein_coding protein_coding MGP_WSBEiJ_T0089204.1 MGP_WSBEiJ_G0033293.1 mouse_genomes_project 8 119288087 119293969 - Cmc2 protein_coding retained_intron MGP_WSBEiJ_T0089205.1 MGP_WSBEiJ_G0033293.1 mouse_genomes_project 8 119288087 119314553 - MGP_WSBEiJ_P0089205 Cmc2 protein_coding protein_coding MGP_WSBEiJ_T0089206.1 MGP_WSBEiJ_G0033293.1 mouse_genomes_project 8 119288684 119314520 - MGP_WSBEiJ_P0089206 Cmc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089207.1 MGP_WSBEiJ_G0033293.1 mouse_genomes_project 8 119288938 119314537 - MGP_WSBEiJ_P0089207 Cmc2 protein_coding protein_coding MGP_WSBEiJ_T0089208.1 MGP_WSBEiJ_G0033293.1 mouse_genomes_project 8 119289020 119314544 - Cmc2 protein_coding processed_transcript MGP_WSBEiJ_T0089209.1 MGP_WSBEiJ_G0033293.1 mouse_genomes_project 8 119289037 119314463 - MGP_WSBEiJ_P0089209 Cmc2 protein_coding protein_coding MGP_WSBEiJ_T0010844.1 MGP_WSBEiJ_G0009001.1 mouse_genomes_project 8 127975082 127975140 + Gm22197 miRNA miRNA MGP_WSBEiJ_T0009038.1 MGP_WSBEiJ_G0007270.1 mouse_genomes_project 8 123707733 123707997 + Gm28324 lincRNA lincRNA MGP_WSBEiJ_T0089353.1 MGP_WSBEiJ_G0033337.1 mouse_genomes_project 8 123830706 123833435 + MGP_WSBEiJ_P0089353 Foxc2 protein_coding protein_coding MGP_WSBEiJ_T0099768.1 MGP_WSBEiJ_G0038431.1 mouse_genomes_project 8 16084067 16084196 - Gm25763 snoRNA snoRNA MGP_WSBEiJ_T0087123.1 MGP_WSBEiJ_G0032619.1 mouse_genomes_project 8 23882175 23902829 - MGP_WSBEiJ_P0087123 Bag4 protein_coding protein_coding MGP_WSBEiJ_T0087716.1 MGP_WSBEiJ_G0032807.1 mouse_genomes_project 8 69654325 69664451 + MGP_WSBEiJ_P0087716 Lpar2 protein_coding protein_coding MGP_WSBEiJ_T0087717.1 MGP_WSBEiJ_G0032807.1 mouse_genomes_project 8 69654461 69664452 + MGP_WSBEiJ_P0087717 Lpar2 protein_coding protein_coding MGP_WSBEiJ_T0011518.1 MGP_WSBEiJ_G0009675.1 mouse_genomes_project 8 45144272 45144545 + Gm23030 misc_RNA misc_RNA MGP_WSBEiJ_T0010800.1 MGP_WSBEiJ_G0008957.1 mouse_genomes_project 8 84526147 84526219 - Mir181d miRNA miRNA MGP_WSBEiJ_T0010772.1 MGP_WSBEiJ_G0008929.1 mouse_genomes_project 8 21072837 21072970 - Gm44365 miRNA miRNA MGP_WSBEiJ_T0008939.1 MGP_WSBEiJ_G0007196.1 mouse_genomes_project 8 32145681 32150382 - lincRNA lincRNA MGP_WSBEiJ_T0008940.1 MGP_WSBEiJ_G0007196.1 mouse_genomes_project 8 32145681 32150387 - lincRNA lincRNA MGP_WSBEiJ_T0009042.1 MGP_WSBEiJ_G0007272.1 mouse_genomes_project 8 123917418 123920534 - lincRNA lincRNA MGP_WSBEiJ_T0098529.1 MGP_WSBEiJ_G0037192.1 mouse_genomes_project 8 22995771 22995874 + Gm23898 snRNA snRNA MGP_WSBEiJ_T0088143.1 MGP_WSBEiJ_G0032937.1 mouse_genomes_project 8 78913940 78930198 - MGP_WSBEiJ_P0088143 Lsm6 protein_coding protein_coding MGP_WSBEiJ_T0088144.1 MGP_WSBEiJ_G0032937.1 mouse_genomes_project 8 78915525 78930198 - MGP_WSBEiJ_P0088144 Lsm6 protein_coding protein_coding MGP_WSBEiJ_T0088145.1 MGP_WSBEiJ_G0032937.1 mouse_genomes_project 8 78917111 78919285 - Lsm6 protein_coding retained_intron MGP_WSBEiJ_T0088146.1 MGP_WSBEiJ_G0032937.1 mouse_genomes_project 8 78917132 78922289 - Lsm6 protein_coding retained_intron MGP_WSBEiJ_T0089181.1 MGP_WSBEiJ_G0033286.1 mouse_genomes_project 8 116338160 116359960 + MGP_WSBEiJ_P0089181 Nudt7 protein_coding protein_coding MGP_WSBEiJ_T0089182.1 MGP_WSBEiJ_G0033286.1 mouse_genomes_project 8 116338177 116357522 + MGP_WSBEiJ_P0089182 Nudt7 protein_coding protein_coding MGP_WSBEiJ_T0089183.1 MGP_WSBEiJ_G0033286.1 mouse_genomes_project 8 116338221 116357532 + MGP_WSBEiJ_P0089183 Nudt7 protein_coding protein_coding MGP_WSBEiJ_T0089184.1 MGP_WSBEiJ_G0033286.1 mouse_genomes_project 8 116338244 116357526 + MGP_WSBEiJ_P0089184 Nudt7 protein_coding protein_coding MGP_WSBEiJ_T0089185.1 MGP_WSBEiJ_G0033286.1 mouse_genomes_project 8 116338245 116353629 + MGP_WSBEiJ_P0089185 Nudt7 protein_coding protein_coding MGP_WSBEiJ_T0005256.1 MGP_WSBEiJ_G0004453.1 mouse_genomes_project 8 11220975 11223979 + antisense antisense MGP_WSBEiJ_T0087890.1 MGP_WSBEiJ_G0032854.1 mouse_genomes_project 8 70668779 70672689 - MGP_WSBEiJ_P0087890 Ifi30 protein_coding protein_coding MGP_WSBEiJ_T0088159.1 MGP_WSBEiJ_G0032942.1 mouse_genomes_project 8 79789050 79827140 + MGP_WSBEiJ_P0088159 Otud4 protein_coding protein_coding MGP_WSBEiJ_T0088160.1 MGP_WSBEiJ_G0032942.1 mouse_genomes_project 8 79789136 79827088 + MGP_WSBEiJ_P0088160 Otud4 protein_coding protein_coding MGP_WSBEiJ_T0088161.1 MGP_WSBEiJ_G0032942.1 mouse_genomes_project 8 79800734 79808624 + Otud4 protein_coding retained_intron MGP_WSBEiJ_T0088162.1 MGP_WSBEiJ_G0032942.1 mouse_genomes_project 8 79801147 79810647 + Otud4 protein_coding retained_intron MGP_WSBEiJ_T0088163.1 MGP_WSBEiJ_G0032942.1 mouse_genomes_project 8 79810487 79817907 + MGP_WSBEiJ_P0088163 Otud4 protein_coding protein_coding MGP_WSBEiJ_T0088164.1 MGP_WSBEiJ_G0032942.1 mouse_genomes_project 8 79816240 79820798 + MGP_WSBEiJ_P0088164 Otud4 protein_coding protein_coding MGP_WSBEiJ_T0015450.1 MGP_WSBEiJ_G0013580.1 mouse_genomes_project 8 20169705 20169996 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088851.1 MGP_WSBEiJ_G0033168.1 mouse_genomes_project 8 106915647 106918351 + MGP_WSBEiJ_P0088851 Tmem208 protein_coding protein_coding MGP_WSBEiJ_T0088852.1 MGP_WSBEiJ_G0033168.1 mouse_genomes_project 8 106915655 106918349 + MGP_WSBEiJ_P0088852 Tmem208 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088853.1 MGP_WSBEiJ_G0033168.1 mouse_genomes_project 8 106915681 106918346 + MGP_WSBEiJ_P0088853 Tmem208 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088854.1 MGP_WSBEiJ_G0033168.1 mouse_genomes_project 8 106915688 106925891 + MGP_WSBEiJ_P0088854 Tmem208 protein_coding protein_coding MGP_WSBEiJ_T0088855.1 MGP_WSBEiJ_G0033168.1 mouse_genomes_project 8 106915748 106925473 + MGP_WSBEiJ_P0088855 Tmem208 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089532.1 MGP_WSBEiJ_G0033383.1 mouse_genomes_project 8 126247497 126267149 + MGP_WSBEiJ_P0089532 Tubb3 protein_coding protein_coding MGP_WSBEiJ_T0086720.1 MGP_WSBEiJ_G0032481.1 mouse_genomes_project 8 7412737 7805979 + MGP_WSBEiJ_P0086720 Myo16 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086721.1 MGP_WSBEiJ_G0032481.1 mouse_genomes_project 8 7437434 7805970 + MGP_WSBEiJ_P0086721 Myo16 protein_coding protein_coding MGP_WSBEiJ_T0086644.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1097446 1117856 + protein_coding retained_intron MGP_WSBEiJ_T0086645.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1097446 1125840 + MGP_WSBEiJ_P0086645 protein_coding protein_coding MGP_WSBEiJ_T0086646.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1097446 1140434 + MGP_WSBEiJ_P0086646 protein_coding protein_coding MGP_WSBEiJ_T0086647.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1097453 1140609 + MGP_WSBEiJ_P0086647 protein_coding protein_coding MGP_WSBEiJ_T0086648.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1097466 1140429 + MGP_WSBEiJ_P0086648 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086649.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1097480 1134111 + protein_coding retained_intron MGP_WSBEiJ_T0086650.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1097618 1140429 + MGP_WSBEiJ_P0086650 protein_coding protein_coding MGP_WSBEiJ_T0086651.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1118163 1119005 + protein_coding retained_intron MGP_WSBEiJ_T0086652.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1123430 1135462 + protein_coding processed_transcript MGP_WSBEiJ_T0086653.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1133183 1138108 + protein_coding retained_intron MGP_WSBEiJ_T0086654.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1135757 1140425 + protein_coding retained_intron MGP_WSBEiJ_T0086655.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1136001 1138723 + protein_coding retained_intron MGP_WSBEiJ_T0086656.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1138111 1138986 + protein_coding retained_intron MGP_WSBEiJ_T0086657.1 MGP_WSBEiJ_G0032458.1 mouse_genomes_project 8 1138631 1143638 + MGP_WSBEiJ_P0086657 protein_coding protein_coding MGP_WSBEiJ_T0099772.1 MGP_WSBEiJ_G0038435.1 mouse_genomes_project 8 23721187 23721318 - Gm23184 snoRNA snoRNA MGP_WSBEiJ_T0088902.1 MGP_WSBEiJ_G0033187.1 mouse_genomes_project 8 107405132 107470652 - MGP_WSBEiJ_P0088902 Ranbp10 protein_coding protein_coding MGP_WSBEiJ_T0009043.1 MGP_WSBEiJ_G0007273.1 mouse_genomes_project 8 123975653 124085236 - Gm26815 lincRNA lincRNA MGP_WSBEiJ_T0011508.1 MGP_WSBEiJ_G0009665.1 mouse_genomes_project 8 1038836 1039089 - Gm23888 misc_RNA misc_RNA MGP_WSBEiJ_T0088724.1 MGP_WSBEiJ_G0033113.1 mouse_genomes_project 8 96254762 96266477 + Usb1 protein_coding retained_intron MGP_WSBEiJ_T0088725.1 MGP_WSBEiJ_G0033113.1 mouse_genomes_project 8 96254799 96269712 + MGP_WSBEiJ_P0088725 Usb1 protein_coding protein_coding MGP_WSBEiJ_T0088726.1 MGP_WSBEiJ_G0033113.1 mouse_genomes_project 8 96267349 96269029 + Usb1 protein_coding retained_intron MGP_WSBEiJ_T0087209.1 MGP_WSBEiJ_G0032659.1 mouse_genomes_project 8 32162534 32169765 - MGP_WSBEiJ_P0087209 Smim18 protein_coding protein_coding MGP_WSBEiJ_T0099816.1 MGP_WSBEiJ_G0038479.1 mouse_genomes_project 8 120599871 120600001 + Gm25200 snoRNA snoRNA MGP_WSBEiJ_T0002281.1 MGP_WSBEiJ_G0002199.1 mouse_genomes_project 8 1458327 1458541 - TEC TEC MGP_WSBEiJ_T0086942.1 MGP_WSBEiJ_G0032553.1 mouse_genomes_project 8 16955264 16955480 - MGP_WSBEiJ_P0086942 Defb8 protein_coding protein_coding MGP_WSBEiJ_T0015442.1 MGP_WSBEiJ_G0013572.1 mouse_genomes_project 8 12510459 12511480 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088610.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94581259 94727800 + MGP_WSBEiJ_P0088610 Gnao1 protein_coding protein_coding MGP_WSBEiJ_T0088611.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94581850 94582860 + Gnao1 protein_coding retained_intron MGP_WSBEiJ_T0088612.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94581929 94746630 + MGP_WSBEiJ_P0088612 Gnao1 protein_coding protein_coding MGP_WSBEiJ_T0088613.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94581931 94746232 + MGP_WSBEiJ_P0088613 Gnao1 protein_coding protein_coding MGP_WSBEiJ_T0088614.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94582405 94734903 + Gnao1 protein_coding processed_transcript MGP_WSBEiJ_T0088615.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94582428 94737907 + MGP_WSBEiJ_P0088615 Gnao1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088616.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94668978 94745439 + MGP_WSBEiJ_P0088616 Gnao1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088617.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94726901 94728072 + Gnao1 protein_coding retained_intron MGP_WSBEiJ_T0088618.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94727801 94745336 + MGP_WSBEiJ_P0088618 Gnao1 protein_coding protein_coding MGP_WSBEiJ_T0088619.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94727801 94745357 + MGP_WSBEiJ_P0088619 Gnao1 protein_coding protein_coding MGP_WSBEiJ_T0088620.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94730340 94733974 + Gnao1 protein_coding processed_transcript MGP_WSBEiJ_T0088621.1 MGP_WSBEiJ_G0033078.1 mouse_genomes_project 8 94740121 94744293 + Gnao1 protein_coding retained_intron MGP_WSBEiJ_T0017888.1 MGP_WSBEiJ_G0015143.1 mouse_genomes_project 8 100475212 100582877 - Gm15680 processed_transcript processed_transcript MGP_WSBEiJ_T0087702.1 MGP_WSBEiJ_G0032803.1 mouse_genomes_project 8 69572077 69604277 - MGP_WSBEiJ_P0087702 Gm20422 protein_coding protein_coding MGP_WSBEiJ_T0087704.1 MGP_WSBEiJ_G0032803.1 mouse_genomes_project 8 69572399 69596259 - MGP_WSBEiJ_P0087704 Gm20422 protein_coding protein_coding MGP_WSBEiJ_T0008952.1 MGP_WSBEiJ_G0007207.1 mouse_genomes_project 8 56081567 56082904 + lincRNA lincRNA MGP_WSBEiJ_T0087464.1 MGP_WSBEiJ_G0032731.1 mouse_genomes_project 8 46818986 46820742 + MGP_WSBEiJ_P0087464 protein_coding protein_coding MGP_WSBEiJ_T0011507.1 MGP_WSBEiJ_G0009664.1 mouse_genomes_project 8 666517 666821 - Gm23886 misc_RNA misc_RNA MGP_WSBEiJ_T0087523.1 MGP_WSBEiJ_G0032751.1 mouse_genomes_project 8 56731368 56734880 + MGP_WSBEiJ_P0087523 Hand2 protein_coding protein_coding MGP_WSBEiJ_T0088884.1 MGP_WSBEiJ_G0033179.1 mouse_genomes_project 8 107221638 107238421 + MGP_WSBEiJ_P0088884 Fam65a protein_coding protein_coding MGP_WSBEiJ_T0015484.1 MGP_WSBEiJ_G0013614.1 mouse_genomes_project 8 82846114 82847072 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002295.1 MGP_WSBEiJ_G0002212.1 mouse_genomes_project 8 110679578 110681284 + TEC TEC MGP_WSBEiJ_T0087934.1 MGP_WSBEiJ_G0032869.1 mouse_genomes_project 8 71280804 71283912 + MGP_WSBEiJ_P0087934 Ocel1 protein_coding protein_coding MGP_WSBEiJ_T0087935.1 MGP_WSBEiJ_G0032869.1 mouse_genomes_project 8 71280845 71283213 + MGP_WSBEiJ_P0087935 Ocel1 protein_coding protein_coding MGP_WSBEiJ_T0087936.1 MGP_WSBEiJ_G0032869.1 mouse_genomes_project 8 71280852 71288891 + MGP_WSBEiJ_P0087936 Ocel1 protein_coding protein_coding MGP_WSBEiJ_T0087937.1 MGP_WSBEiJ_G0032869.1 mouse_genomes_project 8 71281996 71282479 + Ocel1 protein_coding retained_intron MGP_WSBEiJ_T0009036.1 MGP_WSBEiJ_G0007268.1 mouse_genomes_project 8 123297396 123307388 + Gm26537 lincRNA lincRNA MGP_WSBEiJ_T0088088.1 MGP_WSBEiJ_G0032918.1 mouse_genomes_project 8 72697174 72715899 + MGP_WSBEiJ_P0088088 Sin3b protein_coding protein_coding MGP_WSBEiJ_T0088089.1 MGP_WSBEiJ_G0032918.1 mouse_genomes_project 8 72697174 72736833 + MGP_WSBEiJ_P0088089 Sin3b protein_coding protein_coding MGP_WSBEiJ_T0011513.1 MGP_WSBEiJ_G0009670.1 mouse_genomes_project 8 9628992 9631544 + Gm22207 misc_RNA misc_RNA MGP_WSBEiJ_T0098556.1 MGP_WSBEiJ_G0037219.1 mouse_genomes_project 8 87118438 87118546 - Gm22305 snRNA snRNA MGP_WSBEiJ_T0089226.1 MGP_WSBEiJ_G0033303.1 mouse_genomes_project 8 120106498 120116715 - MGP_WSBEiJ_P0089226 Sdr42e1 protein_coding protein_coding MGP_WSBEiJ_T0089227.1 MGP_WSBEiJ_G0033303.1 mouse_genomes_project 8 120106501 120118857 - MGP_WSBEiJ_P0089227 Sdr42e1 protein_coding protein_coding MGP_WSBEiJ_T0089228.1 MGP_WSBEiJ_G0033303.1 mouse_genomes_project 8 120108432 120118857 - MGP_WSBEiJ_P0089228 Sdr42e1 protein_coding protein_coding MGP_WSBEiJ_T0011520.1 MGP_WSBEiJ_G0009677.1 mouse_genomes_project 8 65102233 65102376 + Gm25403 misc_RNA misc_RNA MGP_WSBEiJ_T0086741.1 MGP_WSBEiJ_G0032490.1 mouse_genomes_project 8 8892761 8917543 - MGP_WSBEiJ_P0086741 1700016D06Rik protein_coding protein_coding MGP_WSBEiJ_T0086742.1 MGP_WSBEiJ_G0032490.1 mouse_genomes_project 8 8893315 8900020 - 1700016D06Rik protein_coding processed_transcript MGP_WSBEiJ_T0086743.1 MGP_WSBEiJ_G0032490.1 mouse_genomes_project 8 8893316 8939220 - MGP_WSBEiJ_P0086743 1700016D06Rik protein_coding protein_coding MGP_WSBEiJ_T0086744.1 MGP_WSBEiJ_G0032490.1 mouse_genomes_project 8 8893317 8901909 - MGP_WSBEiJ_P0086744 1700016D06Rik protein_coding protein_coding MGP_WSBEiJ_T0008943.1 MGP_WSBEiJ_G0007198.1 mouse_genomes_project 8 32546759 32549480 + lincRNA lincRNA MGP_WSBEiJ_T0088959.1 MGP_WSBEiJ_G0033209.1 mouse_genomes_project 8 107932064 108017475 - MGP_WSBEiJ_P0088959 Smpd3 protein_coding protein_coding MGP_WSBEiJ_T0088579.1 MGP_WSBEiJ_G0033063.1 mouse_genomes_project 8 93064576 93068242 + MGP_WSBEiJ_P0088579 Irx5 protein_coding protein_coding MGP_WSBEiJ_T0086806.1 MGP_WSBEiJ_G0032502.1 mouse_genomes_project 8 10370663 10384506 + MGP_WSBEiJ_P0086806 Proz protein_coding protein_coding MGP_WSBEiJ_T0088641.1 MGP_WSBEiJ_G0033087.1 mouse_genomes_project 8 95097394 95201180 + MGP_WSBEiJ_P0088641 Nup93 protein_coding protein_coding MGP_WSBEiJ_T0088642.1 MGP_WSBEiJ_G0033087.1 mouse_genomes_project 8 95111456 95201388 + MGP_WSBEiJ_P0088642 Nup93 protein_coding protein_coding MGP_WSBEiJ_T0008948.1 MGP_WSBEiJ_G0007203.1 mouse_genomes_project 8 40671132 40906379 + 2810404M03Rik lincRNA lincRNA MGP_WSBEiJ_T0088639.1 MGP_WSBEiJ_G0033085.1 mouse_genomes_project 8 95050401 95051351 + MGP_WSBEiJ_P0088639 Mt2 protein_coding protein_coding MGP_WSBEiJ_T0087728.1 MGP_WSBEiJ_G0032810.1 mouse_genomes_project 8 69726483 69742179 - MGP_WSBEiJ_P0087728 Yjefn3 protein_coding protein_coding MGP_WSBEiJ_T0087729.1 MGP_WSBEiJ_G0032810.1 mouse_genomes_project 8 69726483 69729644 - MGP_WSBEiJ_P0087729 Yjefn3 protein_coding protein_coding MGP_WSBEiJ_T0087730.1 MGP_WSBEiJ_G0032810.1 mouse_genomes_project 8 69726485 69726871 - Yjefn3 protein_coding processed_transcript MGP_WSBEiJ_T0087731.1 MGP_WSBEiJ_G0032810.1 mouse_genomes_project 8 69726512 69732625 - MGP_WSBEiJ_P0087731 Yjefn3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087891.1 MGP_WSBEiJ_G0032855.1 mouse_genomes_project 8 70674200 70682799 - MGP_WSBEiJ_P0087891 Pik3r2 protein_coding protein_coding MGP_WSBEiJ_T0087892.1 MGP_WSBEiJ_G0032855.1 mouse_genomes_project 8 70674485 70675413 - MGP_WSBEiJ_P0087892 Pik3r2 protein_coding protein_coding MGP_WSBEiJ_T0087893.1 MGP_WSBEiJ_G0032855.1 mouse_genomes_project 8 70674664 70675689 - Pik3r2 protein_coding retained_intron MGP_WSBEiJ_T0087894.1 MGP_WSBEiJ_G0032855.1 mouse_genomes_project 8 70678066 70679238 - Pik3r2 protein_coding retained_intron MGP_WSBEiJ_T0087895.1 MGP_WSBEiJ_G0032855.1 mouse_genomes_project 8 70678446 70680769 - MGP_WSBEiJ_P0087895 Pik3r2 protein_coding protein_coding MGP_WSBEiJ_T0087896.1 MGP_WSBEiJ_G0032855.1 mouse_genomes_project 8 70681090 70682765 - Pik3r2 protein_coding processed_transcript MGP_WSBEiJ_T0087237.1 MGP_WSBEiJ_G0032665.1 mouse_genomes_project 8 32803175 32803636 + MGP_WSBEiJ_P0087237 protein_coding protein_coding MGP_WSBEiJ_T0088076.1 MGP_WSBEiJ_G0032914.1 mouse_genomes_project 8 72484390 72541027 - MGP_WSBEiJ_P0088076 Med26 protein_coding protein_coding MGP_WSBEiJ_T0087466.1 MGP_WSBEiJ_G0032733.1 mouse_genomes_project 8 46940256 46944271 + MGP_WSBEiJ_P0087466 Cldn22 protein_coding protein_coding MGP_WSBEiJ_T0015494.1 MGP_WSBEiJ_G0013624.1 mouse_genomes_project 8 101279214 101279713 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002301.1 MGP_WSBEiJ_G0002218.1 mouse_genomes_project 8 126244198 126244851 - TEC TEC MGP_WSBEiJ_T0015491.1 MGP_WSBEiJ_G0013621.1 mouse_genomes_project 8 96496000 96497438 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015461.1 MGP_WSBEiJ_G0013591.1 mouse_genomes_project 8 51594896 51595862 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017883.1 MGP_WSBEiJ_G0015141.1 mouse_genomes_project 8 87862656 87868532 - Gm27208 processed_transcript lincRNA MGP_WSBEiJ_T0017884.1 MGP_WSBEiJ_G0015141.1 mouse_genomes_project 8 87868049 87869154 - Gm27208 processed_transcript TEC MGP_WSBEiJ_T0089178.1 MGP_WSBEiJ_G0033284.1 mouse_genomes_project 8 115814425 115827682 + MGP_WSBEiJ_P0089178 Syce1l protein_coding protein_coding MGP_WSBEiJ_T0089179.1 MGP_WSBEiJ_G0033284.1 mouse_genomes_project 8 115814425 115827682 + MGP_WSBEiJ_P0089179 Syce1l protein_coding protein_coding MGP_WSBEiJ_T0087899.1 MGP_WSBEiJ_G0032858.1 mouse_genomes_project 8 70743872 70748439 - MGP_WSBEiJ_P0087899 Arrdc2 protein_coding protein_coding MGP_WSBEiJ_T0087822.1 MGP_WSBEiJ_G0032833.1 mouse_genomes_project 8 70249484 70308960 - Crtc1 protein_coding retained_intron MGP_WSBEiJ_T0087823.1 MGP_WSBEiJ_G0032833.1 mouse_genomes_project 8 70249484 70308960 - MGP_WSBEiJ_P0087823 Crtc1 protein_coding protein_coding MGP_WSBEiJ_T0087824.1 MGP_WSBEiJ_G0032833.1 mouse_genomes_project 8 70266217 70271280 - Crtc1 protein_coding retained_intron MGP_WSBEiJ_T0087825.1 MGP_WSBEiJ_G0032833.1 mouse_genomes_project 8 70273315 70308956 - Crtc1 protein_coding retained_intron MGP_WSBEiJ_T0087826.1 MGP_WSBEiJ_G0032833.1 mouse_genomes_project 8 70274757 70300754 - Crtc1 protein_coding processed_transcript MGP_WSBEiJ_T0089489.1 MGP_WSBEiJ_G0033372.1 mouse_genomes_project 8 126006770 126024628 + MGP_WSBEiJ_P0089489 Dpep1 protein_coding protein_coding MGP_WSBEiJ_T0002293.1 MGP_WSBEiJ_G0002210.1 mouse_genomes_project 8 108865649 108866432 + TEC TEC MGP_WSBEiJ_T0089583.1 MGP_WSBEiJ_G0033402.1 mouse_genomes_project 8 127518717 127548664 - MGP_WSBEiJ_P0089583 2310022B05Rik protein_coding protein_coding MGP_WSBEiJ_T0087074.1 MGP_WSBEiJ_G0032608.1 mouse_genomes_project 8 23009643 23077975 - MGP_WSBEiJ_P0087074 Adam9 protein_coding protein_coding MGP_WSBEiJ_T0005290.1 MGP_WSBEiJ_G0004481.1 mouse_genomes_project 8 68932149 68933234 + antisense antisense MGP_WSBEiJ_T0087570.1 MGP_WSBEiJ_G0032764.1 mouse_genomes_project 8 60785601 60969893 + MGP_WSBEiJ_P0087570 Sh3rf1 protein_coding protein_coding MGP_WSBEiJ_T0008947.1 MGP_WSBEiJ_G0007202.1 mouse_genomes_project 8 39693297 39696538 - Gm26584 lincRNA lincRNA MGP_WSBEiJ_T0098564.1 MGP_WSBEiJ_G0037227.1 mouse_genomes_project 8 112340785 112340892 - Gm23627 snRNA snRNA MGP_WSBEiJ_T0005316.1 MGP_WSBEiJ_G0004503.1 mouse_genomes_project 8 118011425 118013590 + Gm15655 antisense antisense MGP_WSBEiJ_T0008933.1 MGP_WSBEiJ_G0007192.1 mouse_genomes_project 8 26829127 26831545 + Gm26795 lincRNA lincRNA MGP_WSBEiJ_T0008934.1 MGP_WSBEiJ_G0007192.1 mouse_genomes_project 8 26829154 26829931 + Gm26795 lincRNA lincRNA MGP_WSBEiJ_T0088803.1 MGP_WSBEiJ_G0033147.1 mouse_genomes_project 8 106370102 106379799 + MGP_WSBEiJ_P0088803 Ces2b protein_coding protein_coding MGP_WSBEiJ_T0088804.1 MGP_WSBEiJ_G0033147.1 mouse_genomes_project 8 106370131 106378676 + MGP_WSBEiJ_P0088804 Ces2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088805.1 MGP_WSBEiJ_G0033147.1 mouse_genomes_project 8 106373183 106378483 + MGP_WSBEiJ_P0088805 Ces2b protein_coding unknown_likely_coding MGP_WSBEiJ_T0017857.1 MGP_WSBEiJ_G0015133.1 mouse_genomes_project 8 44728379 44746034 + processed_transcript processed_transcript MGP_WSBEiJ_T0086709.1 MGP_WSBEiJ_G0032473.1 mouse_genomes_project 8 2584900 2587813 + MGP_WSBEiJ_P0086709 protein_coding protein_coding MGP_WSBEiJ_T0086934.1 MGP_WSBEiJ_G0032546.1 mouse_genomes_project 8 16641061 16643314 + MGP_WSBEiJ_P0086934 Spag11b protein_coding protein_coding MGP_WSBEiJ_T0086935.1 MGP_WSBEiJ_G0032546.1 mouse_genomes_project 8 16641100 16643053 + MGP_WSBEiJ_P0086935 Spag11b protein_coding protein_coding MGP_WSBEiJ_T0087187.1 MGP_WSBEiJ_G0032649.1 mouse_genomes_project 8 30158100 30262086 - MGP_WSBEiJ_P0087187 Nrg1 protein_coding protein_coding MGP_WSBEiJ_T0099802.1 MGP_WSBEiJ_G0038465.1 mouse_genomes_project 8 87431156 87431273 - Gm24781 snoRNA snoRNA MGP_WSBEiJ_T0088811.1 MGP_WSBEiJ_G0033151.1 mouse_genomes_project 8 106520548 106528329 + MGP_WSBEiJ_P0088811 Ces2g protein_coding protein_coding MGP_WSBEiJ_T0008957.1 MGP_WSBEiJ_G0007212.1 mouse_genomes_project 8 64831803 64873945 - lincRNA lincRNA MGP_WSBEiJ_T0009019.1 MGP_WSBEiJ_G0007254.1 mouse_genomes_project 8 100494633 100503940 + lincRNA lincRNA MGP_WSBEiJ_T0087269.1 MGP_WSBEiJ_G0032680.1 mouse_genomes_project 8 38376836 38441380 - MGP_WSBEiJ_P0087269 Msr1 protein_coding protein_coding MGP_WSBEiJ_T0087270.1 MGP_WSBEiJ_G0032680.1 mouse_genomes_project 8 38400322 38441380 - MGP_WSBEiJ_P0087270 Msr1 protein_coding protein_coding MGP_WSBEiJ_T0088351.1 MGP_WSBEiJ_G0033000.1 mouse_genomes_project 8 85231964 85235927 + MGP_WSBEiJ_P0088351 Gadd45gip1 protein_coding protein_coding MGP_WSBEiJ_T0087250.1 MGP_WSBEiJ_G0032675.1 mouse_genomes_project 8 35106325 35171175 + MGP_WSBEiJ_P0087250 6430573F11Rik protein_coding protein_coding MGP_WSBEiJ_T0087251.1 MGP_WSBEiJ_G0032675.1 mouse_genomes_project 8 35106351 35172536 + MGP_WSBEiJ_P0087251 6430573F11Rik protein_coding protein_coding MGP_WSBEiJ_T0087252.1 MGP_WSBEiJ_G0032675.1 mouse_genomes_project 8 35106959 35169810 + MGP_WSBEiJ_P0087252 6430573F11Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087253.1 MGP_WSBEiJ_G0032675.1 mouse_genomes_project 8 35146187 35171228 + MGP_WSBEiJ_P0087253 6430573F11Rik protein_coding protein_coding MGP_WSBEiJ_T0087254.1 MGP_WSBEiJ_G0032675.1 mouse_genomes_project 8 35163867 35170812 + 6430573F11Rik protein_coding processed_transcript MGP_WSBEiJ_T0017853.1 MGP_WSBEiJ_G0015131.1 mouse_genomes_project 8 39851567 39858265 + B430010I23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017854.1 MGP_WSBEiJ_G0015131.1 mouse_genomes_project 8 39851837 39854616 + B430010I23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0099819.1 MGP_WSBEiJ_G0038482.1 mouse_genomes_project 8 125923784 125923870 + Snord68 snoRNA snoRNA MGP_WSBEiJ_T0008969.1 MGP_WSBEiJ_G0007222.1 mouse_genomes_project 8 81131970 81137208 - Gm27048 lincRNA lincRNA MGP_WSBEiJ_T0089062.1 MGP_WSBEiJ_G0033248.1 mouse_genomes_project 8 111995202 111997193 + MGP_WSBEiJ_P0089062 Gm21964 protein_coding protein_coding MGP_WSBEiJ_T0005283.1 MGP_WSBEiJ_G0004475.1 mouse_genomes_project 8 66156926 66159841 - Gm15354 antisense antisense MGP_WSBEiJ_T0010770.1 MGP_WSBEiJ_G0008927.1 mouse_genomes_project 8 13598081 13598163 - Mir3106 miRNA miRNA MGP_WSBEiJ_T0089272.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122502494 122554544 + MGP_WSBEiJ_P0089272 Usp10 protein_coding protein_coding MGP_WSBEiJ_T0089273.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122502948 122554549 + MGP_WSBEiJ_P0089273 Usp10 protein_coding protein_coding MGP_WSBEiJ_T0089274.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122502967 122549609 + Usp10 protein_coding processed_transcript MGP_WSBEiJ_T0089275.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122502991 122548916 + MGP_WSBEiJ_P0089275 Usp10 protein_coding protein_coding MGP_WSBEiJ_T0089276.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122538720 122543361 + Usp10 protein_coding processed_transcript MGP_WSBEiJ_T0089277.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122542945 122550273 + Usp10 protein_coding retained_intron MGP_WSBEiJ_T0089278.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122543056 122549385 + Usp10 protein_coding retained_intron MGP_WSBEiJ_T0089279.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122548944 122552299 + Usp10 protein_coding retained_intron MGP_WSBEiJ_T0089280.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122549633 122551793 + Usp10 protein_coding retained_intron MGP_WSBEiJ_T0089281.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122550256 122553858 + MGP_WSBEiJ_P0089281 Usp10 protein_coding protein_coding MGP_WSBEiJ_T0089282.1 MGP_WSBEiJ_G0033323.1 mouse_genomes_project 8 122553194 122554546 + Usp10 protein_coding processed_transcript MGP_WSBEiJ_T0088763.1 MGP_WSBEiJ_G0033128.1 mouse_genomes_project 8 103995746 104006976 - protein_coding retained_intron MGP_WSBEiJ_T0088764.1 MGP_WSBEiJ_G0033128.1 mouse_genomes_project 8 103999225 104007115 - protein_coding retained_intron MGP_WSBEiJ_T0088861.1 MGP_WSBEiJ_G0033171.1 mouse_genomes_project 8 106967713 106970000 + MGP_WSBEiJ_P0088861 Plekhg4 protein_coding protein_coding MGP_WSBEiJ_T0088862.1 MGP_WSBEiJ_G0033171.1 mouse_genomes_project 8 106969343 106977299 + MGP_WSBEiJ_P0088862 Plekhg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088863.1 MGP_WSBEiJ_G0033171.1 mouse_genomes_project 8 106969820 106976681 + MGP_WSBEiJ_P0088863 Plekhg4 protein_coding protein_coding MGP_WSBEiJ_T0088864.1 MGP_WSBEiJ_G0033171.1 mouse_genomes_project 8 106969820 106977302 + MGP_WSBEiJ_P0088864 Plekhg4 protein_coding protein_coding MGP_WSBEiJ_T0088865.1 MGP_WSBEiJ_G0033171.1 mouse_genomes_project 8 106974933 106977295 + Plekhg4 protein_coding retained_intron MGP_WSBEiJ_T0088926.1 MGP_WSBEiJ_G0033200.1 mouse_genomes_project 8 107642411 107649229 - MGP_WSBEiJ_P0088926 Dpep2 protein_coding protein_coding MGP_WSBEiJ_T0088927.1 MGP_WSBEiJ_G0033200.1 mouse_genomes_project 8 107642412 107654016 - MGP_WSBEiJ_P0088927 Dpep2 protein_coding protein_coding MGP_WSBEiJ_T0088928.1 MGP_WSBEiJ_G0033200.1 mouse_genomes_project 8 107642417 107649239 - MGP_WSBEiJ_P0088928 Dpep2 protein_coding protein_coding MGP_WSBEiJ_T0088929.1 MGP_WSBEiJ_G0033200.1 mouse_genomes_project 8 107645214 107649202 - Dpep2 protein_coding retained_intron MGP_WSBEiJ_T0088930.1 MGP_WSBEiJ_G0033200.1 mouse_genomes_project 8 107645965 107649230 - Dpep2 protein_coding retained_intron MGP_WSBEiJ_T0089420.1 MGP_WSBEiJ_G0033351.1 mouse_genomes_project 8 125202230 125204996 + MGP_WSBEiJ_P0089420 Il17c protein_coding protein_coding MGP_WSBEiJ_T0087267.1 MGP_WSBEiJ_G0032679.1 mouse_genomes_project 8 37824083 37963965 + MGP_WSBEiJ_P0087267 Tusc3 protein_coding protein_coding MGP_WSBEiJ_T0087268.1 MGP_WSBEiJ_G0032679.1 mouse_genomes_project 8 37824124 37963965 + MGP_WSBEiJ_P0087268 Tusc3 protein_coding protein_coding MGP_WSBEiJ_T0088074.1 MGP_WSBEiJ_G0032913.1 mouse_genomes_project 8 72468034 72482491 - MGP_WSBEiJ_P0088074 Slc35e1 protein_coding protein_coding MGP_WSBEiJ_T0088075.1 MGP_WSBEiJ_G0032913.1 mouse_genomes_project 8 72474479 72482094 - MGP_WSBEiJ_P0088075 Slc35e1 protein_coding protein_coding MGP_WSBEiJ_T0015486.1 MGP_WSBEiJ_G0013616.1 mouse_genomes_project 8 85255089 85255473 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005281.1 MGP_WSBEiJ_G0004473.1 mouse_genomes_project 8 60675815 60752478 - Gm16178 antisense antisense MGP_WSBEiJ_T0089202.1 MGP_WSBEiJ_G0033291.1 mouse_genomes_project 8 118851878 118862545 + MGP_WSBEiJ_P0089202 Dynlrb2 protein_coding protein_coding MGP_WSBEiJ_T0010812.1 MGP_WSBEiJ_G0008969.1 mouse_genomes_project 8 88659640 88659716 + Mir7071 miRNA miRNA MGP_WSBEiJ_T0008920.1 MGP_WSBEiJ_G0007182.1 mouse_genomes_project 8 8951412 8961673 + 1700128E19Rik lincRNA lincRNA MGP_WSBEiJ_T0088704.1 MGP_WSBEiJ_G0033107.1 mouse_genomes_project 8 95978275 96001544 + MGP_WSBEiJ_P0088704 Drc7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009020.1 MGP_WSBEiJ_G0007255.1 mouse_genomes_project 8 103984519 103985550 + lincRNA lincRNA MGP_WSBEiJ_T0088998.1 MGP_WSBEiJ_G0033225.1 mouse_genomes_project 8 108898855 108937431 + MGP_WSBEiJ_P0088998 Cyb5b protein_coding protein_coding MGP_WSBEiJ_T0089560.1 MGP_WSBEiJ_G0033395.1 mouse_genomes_project 8 126858835 126887817 - MGP_WSBEiJ_P0089560 Taf5l protein_coding protein_coding MGP_WSBEiJ_T0089561.1 MGP_WSBEiJ_G0033395.1 mouse_genomes_project 8 126858835 126886173 - MGP_WSBEiJ_P0089561 Taf5l protein_coding protein_coding MGP_WSBEiJ_T0088256.1 MGP_WSBEiJ_G0032974.1 mouse_genomes_project 8 84337257 84339295 + MGP_WSBEiJ_P0088256 protein_coding unknown_likely_coding MGP_WSBEiJ_T0017892.1 MGP_WSBEiJ_G0015145.1 mouse_genomes_project 8 113097898 113112563 - 9430091E24Rik processed_transcript processed_transcript MGP_WSBEiJ_T0089636.1 MGP_WSBEiJ_G0033420.1 mouse_genomes_project 8 129278540 129381427 + MGP_WSBEiJ_P0089636 Slc35f3 protein_coding protein_coding MGP_WSBEiJ_T0087887.1 MGP_WSBEiJ_G0032852.1 mouse_genomes_project 8 70661870 70664682 + MGP_WSBEiJ_P0087887 Rab3a protein_coding protein_coding MGP_WSBEiJ_T0087888.1 MGP_WSBEiJ_G0032852.1 mouse_genomes_project 8 70662471 70663701 + Rab3a protein_coding retained_intron MGP_WSBEiJ_T0088380.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85318840 85321751 + MGP_WSBEiJ_P0088380 Dnase2a protein_coding protein_coding MGP_WSBEiJ_T0088381.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85318840 85321990 + MGP_WSBEiJ_P0088381 Dnase2a protein_coding protein_coding MGP_WSBEiJ_T0088382.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85318927 85319481 + Dnase2a protein_coding retained_intron MGP_WSBEiJ_T0088383.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85318927 85319749 + Dnase2a protein_coding retained_intron MGP_WSBEiJ_T0088384.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85318970 85320206 + MGP_WSBEiJ_P0088384 Dnase2a protein_coding protein_coding MGP_WSBEiJ_T0088385.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85319001 85324761 + Dnase2a protein_coding processed_transcript MGP_WSBEiJ_T0088386.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85319011 85320245 + MGP_WSBEiJ_P0088386 Dnase2a protein_coding protein_coding MGP_WSBEiJ_T0088387.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85320115 85321743 + Dnase2a protein_coding processed_transcript MGP_WSBEiJ_T0088391.1 MGP_WSBEiJ_G0033008.1 mouse_genomes_project 8 85323672 85333155 + Dnase2a protein_coding processed_transcript MGP_WSBEiJ_T0089640.1 MGP_WSBEiJ_G0033424.1 mouse_genomes_project 8 129586157 129594676 - MGP_WSBEiJ_P0089640 Irf2bp2 protein_coding protein_coding MGP_WSBEiJ_T0088293.1 MGP_WSBEiJ_G0032991.1 mouse_genomes_project 8 84612898 84616502 - Ccdc130 protein_coding retained_intron MGP_WSBEiJ_T0088294.1 MGP_WSBEiJ_G0032991.1 mouse_genomes_project 8 84613077 84625029 - MGP_WSBEiJ_P0088294 Ccdc130 protein_coding protein_coding MGP_WSBEiJ_T0088295.1 MGP_WSBEiJ_G0032991.1 mouse_genomes_project 8 84613710 84621415 - MGP_WSBEiJ_P0088295 Ccdc130 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088296.1 MGP_WSBEiJ_G0032991.1 mouse_genomes_project 8 84614991 84616741 - Ccdc130 protein_coding retained_intron MGP_WSBEiJ_T0088297.1 MGP_WSBEiJ_G0032991.1 mouse_genomes_project 8 84618502 84624982 - MGP_WSBEiJ_P0088297 Ccdc130 protein_coding protein_coding MGP_WSBEiJ_T0088298.1 MGP_WSBEiJ_G0032991.1 mouse_genomes_project 8 84618777 84624979 - Ccdc130 protein_coding retained_intron MGP_WSBEiJ_T0087014.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 20943758 21130911 + MGP_WSBEiJ_P0087014 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087015.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 20943796 21131473 + MGP_WSBEiJ_P0087015 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087016.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 20944050 21129285 + MGP_WSBEiJ_P0087016 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087017.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21004956 21129768 + MGP_WSBEiJ_P0087017 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087018.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21004985 21130259 + MGP_WSBEiJ_P0087018 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087019.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21005088 21130259 + MGP_WSBEiJ_P0087019 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087020.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21029050 21131476 + MGP_WSBEiJ_P0087020 Ank1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087021.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21029066 21131476 + MGP_WSBEiJ_P0087021 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087022.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21029102 21131476 + MGP_WSBEiJ_P0087022 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087023.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21029316 21130666 + MGP_WSBEiJ_P0087023 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087024.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21029316 21130666 + MGP_WSBEiJ_P0087024 Ank1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087025.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21066226 21100458 + MGP_WSBEiJ_P0087025 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087026.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21096742 21106845 + Ank1 protein_coding retained_intron MGP_WSBEiJ_T0087027.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21120206 21130257 + MGP_WSBEiJ_P0087027 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087028.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21120281 21129672 + MGP_WSBEiJ_P0087028 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087029.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21120453 21129283 + MGP_WSBEiJ_P0087029 Ank1 protein_coding protein_coding MGP_WSBEiJ_T0087030.1 MGP_WSBEiJ_G0032593.1 mouse_genomes_project 8 21121269 21129347 + Ank1 protein_coding retained_intron MGP_WSBEiJ_T0088535.1 MGP_WSBEiJ_G0033048.1 mouse_genomes_project 8 89078086 89161832 + MGP_WSBEiJ_P0088535 Nkd1 protein_coding protein_coding MGP_WSBEiJ_T0088536.1 MGP_WSBEiJ_G0033048.1 mouse_genomes_project 8 89084398 89161832 + MGP_WSBEiJ_P0088536 Nkd1 protein_coding protein_coding MGP_WSBEiJ_T0089044.1 MGP_WSBEiJ_G0033239.1 mouse_genomes_project 8 111566530 111587290 + MGP_WSBEiJ_P0089044 Zfp821 protein_coding protein_coding MGP_WSBEiJ_T0099818.1 MGP_WSBEiJ_G0038481.1 mouse_genomes_project 8 124430287 124430366 - Gm23299 snoRNA snoRNA MGP_WSBEiJ_T0010781.1 MGP_WSBEiJ_G0008938.1 mouse_genomes_project 8 46685288 46685368 + Gm27409 miRNA miRNA MGP_WSBEiJ_T0008996.1 MGP_WSBEiJ_G0007241.1 mouse_genomes_project 8 87985288 87986471 - 1700120C18Rik lincRNA lincRNA MGP_WSBEiJ_T0089126.1 MGP_WSBEiJ_G0033266.1 mouse_genomes_project 8 113301030 113329599 - MGP_WSBEiJ_P0089126 Mlkl protein_coding protein_coding MGP_WSBEiJ_T0089127.1 MGP_WSBEiJ_G0033266.1 mouse_genomes_project 8 113301033 113329599 - MGP_WSBEiJ_P0089127 Mlkl protein_coding protein_coding MGP_WSBEiJ_T0089128.1 MGP_WSBEiJ_G0033266.1 mouse_genomes_project 8 113301035 113307301 - Mlkl protein_coding processed_transcript MGP_WSBEiJ_T0089129.1 MGP_WSBEiJ_G0033266.1 mouse_genomes_project 8 113323239 113329215 - MGP_WSBEiJ_P0089129 Mlkl protein_coding protein_coding MGP_WSBEiJ_T0098538.1 MGP_WSBEiJ_G0037201.1 mouse_genomes_project 8 49827405 49827468 + Gm23986 snRNA snRNA MGP_WSBEiJ_T0010816.1 MGP_WSBEiJ_G0008973.1 mouse_genomes_project 8 96687580 96687644 - Mir7073 miRNA miRNA MGP_WSBEiJ_T0087170.1 MGP_WSBEiJ_G0032641.1 mouse_genomes_project 8 25682515 25724607 + MGP_WSBEiJ_P0087170 protein_coding protein_coding MGP_WSBEiJ_T0005282.1 MGP_WSBEiJ_G0004474.1 mouse_genomes_project 8 61444612 61516914 + 4930512H18Rik antisense antisense MGP_WSBEiJ_T0008965.1 MGP_WSBEiJ_G0007219.1 mouse_genomes_project 8 74567394 74787374 - lincRNA lincRNA MGP_WSBEiJ_T0008966.1 MGP_WSBEiJ_G0007219.1 mouse_genomes_project 8 74781430 74787347 - lincRNA lincRNA MGP_WSBEiJ_T0087448.1 MGP_WSBEiJ_G0032725.1 mouse_genomes_project 8 46505870 46508084 + MGP_WSBEiJ_P0087448 protein_coding protein_coding MGP_WSBEiJ_T0015475.1 MGP_WSBEiJ_G0013605.1 mouse_genomes_project 8 76879497 76880290 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087249.1 MGP_WSBEiJ_G0032674.1 mouse_genomes_project 8 34860532 34895774 - MGP_WSBEiJ_P0087249 Lonrf1 protein_coding protein_coding MGP_WSBEiJ_T0087188.1 MGP_WSBEiJ_G0032650.1 mouse_genomes_project 8 30290532 30357794 - MGP_WSBEiJ_P0087188 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0008935.1 MGP_WSBEiJ_G0007193.1 mouse_genomes_project 8 28848408 28855358 + 4933433F19Rik lincRNA lincRNA MGP_WSBEiJ_T0005299.1 MGP_WSBEiJ_G0004489.1 mouse_genomes_project 8 105659613 105666638 - Gm10631 antisense antisense MGP_WSBEiJ_T0088058.1 MGP_WSBEiJ_G0032904.1 mouse_genomes_project 8 72181410 72190021 - MGP_WSBEiJ_P0088058 Cib3 protein_coding protein_coding MGP_WSBEiJ_T0005323.1 MGP_WSBEiJ_G0004509.1 mouse_genomes_project 8 124720622 124721594 - Gm27011 antisense antisense MGP_WSBEiJ_T0087324.1 MGP_WSBEiJ_G0032692.1 mouse_genomes_project 8 40071126 40167535 + MGP_WSBEiJ_P0087324 Pcm1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087325.1 MGP_WSBEiJ_G0032692.1 mouse_genomes_project 8 40071186 40169620 + MGP_WSBEiJ_P0087325 Pcm1 protein_coding protein_coding MGP_WSBEiJ_T0087938.1 MGP_WSBEiJ_G0032870.1 mouse_genomes_project 8 71283646 71291436 - Nr2f6 protein_coding processed_transcript MGP_WSBEiJ_T0087939.1 MGP_WSBEiJ_G0032870.1 mouse_genomes_project 8 71283650 71291490 - MGP_WSBEiJ_P0087939 Nr2f6 protein_coding protein_coding MGP_WSBEiJ_T0087940.1 MGP_WSBEiJ_G0032870.1 mouse_genomes_project 8 71284157 71285320 - Nr2f6 protein_coding processed_transcript MGP_WSBEiJ_T0087941.1 MGP_WSBEiJ_G0032870.1 mouse_genomes_project 8 71284182 71285320 - Nr2f6 protein_coding processed_transcript MGP_WSBEiJ_T0087942.1 MGP_WSBEiJ_G0032870.1 mouse_genomes_project 8 71284647 71285320 - Nr2f6 protein_coding processed_transcript MGP_WSBEiJ_T0087943.1 MGP_WSBEiJ_G0032870.1 mouse_genomes_project 8 71285281 71290439 - Nr2f6 protein_coding processed_transcript MGP_WSBEiJ_T0087944.1 MGP_WSBEiJ_G0032870.1 mouse_genomes_project 8 71285281 71290620 - MGP_WSBEiJ_P0087944 Nr2f6 protein_coding protein_coding MGP_WSBEiJ_T0087945.1 MGP_WSBEiJ_G0032870.1 mouse_genomes_project 8 71285348 71290707 - MGP_WSBEiJ_P0087945 Nr2f6 protein_coding protein_coding MGP_WSBEiJ_T0088194.1 MGP_WSBEiJ_G0032954.1 mouse_genomes_project 8 83132135 83358093 + MGP_WSBEiJ_P0088194 Rnf150 protein_coding protein_coding MGP_WSBEiJ_T0008919.1 MGP_WSBEiJ_G0007181.1 mouse_genomes_project 8 8692508 8695258 + E230013L22Rik lincRNA lincRNA MGP_WSBEiJ_T0087066.1 MGP_WSBEiJ_G0032607.1 mouse_genomes_project 8 22882540 23008077 - MGP_WSBEiJ_P0087066 Adam32 protein_coding protein_coding MGP_WSBEiJ_T0087067.1 MGP_WSBEiJ_G0032607.1 mouse_genomes_project 8 22882543 22915205 - Adam32 protein_coding retained_intron MGP_WSBEiJ_T0087068.1 MGP_WSBEiJ_G0032607.1 mouse_genomes_project 8 22882543 22923881 - MGP_WSBEiJ_P0087068 Adam32 protein_coding protein_coding MGP_WSBEiJ_T0087069.1 MGP_WSBEiJ_G0032607.1 mouse_genomes_project 8 22882546 23008068 - MGP_WSBEiJ_P0087069 Adam32 protein_coding protein_coding MGP_WSBEiJ_T0087070.1 MGP_WSBEiJ_G0032607.1 mouse_genomes_project 8 22882546 22935571 - MGP_WSBEiJ_P0087070 Adam32 protein_coding protein_coding MGP_WSBEiJ_T0087071.1 MGP_WSBEiJ_G0032607.1 mouse_genomes_project 8 22882605 22914087 - MGP_WSBEiJ_P0087071 Adam32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087072.1 MGP_WSBEiJ_G0032607.1 mouse_genomes_project 8 22968238 23008054 - MGP_WSBEiJ_P0087072 Adam32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087073.1 MGP_WSBEiJ_G0032607.1 mouse_genomes_project 8 22976176 23008077 - Adam32 protein_coding retained_intron MGP_WSBEiJ_T0086866.1 MGP_WSBEiJ_G0032524.1 mouse_genomes_project 8 11317943 11342480 - MGP_WSBEiJ_P0086866 Tdrp protein_coding protein_coding MGP_WSBEiJ_T0086867.1 MGP_WSBEiJ_G0032524.1 mouse_genomes_project 8 11318064 11319322 - Tdrp protein_coding processed_transcript MGP_WSBEiJ_T0086868.1 MGP_WSBEiJ_G0032524.1 mouse_genomes_project 8 11319690 11327744 - Tdrp protein_coding processed_transcript MGP_WSBEiJ_T0086869.1 MGP_WSBEiJ_G0032524.1 mouse_genomes_project 8 11320047 11342724 - MGP_WSBEiJ_P0086869 Tdrp protein_coding protein_coding MGP_WSBEiJ_T0086870.1 MGP_WSBEiJ_G0032524.1 mouse_genomes_project 8 11340319 11342447 - Tdrp protein_coding retained_intron MGP_WSBEiJ_T0088269.1 MGP_WSBEiJ_G0032978.1 mouse_genomes_project 8 84371717 84385972 - MGP_WSBEiJ_P0088269 Il27ra protein_coding protein_coding MGP_WSBEiJ_T0088364.1 MGP_WSBEiJ_G0033004.1 mouse_genomes_project 8 85257957 85269954 + MGP_WSBEiJ_P0088364 Farsa protein_coding protein_coding MGP_WSBEiJ_T0088365.1 MGP_WSBEiJ_G0033004.1 mouse_genomes_project 8 85257963 85269953 + Farsa protein_coding retained_intron MGP_WSBEiJ_T0088366.1 MGP_WSBEiJ_G0033004.1 mouse_genomes_project 8 85257977 85267718 + Farsa protein_coding retained_intron MGP_WSBEiJ_T0088367.1 MGP_WSBEiJ_G0033004.1 mouse_genomes_project 8 85257985 85269954 + MGP_WSBEiJ_P0088367 Farsa protein_coding protein_coding MGP_WSBEiJ_T0088368.1 MGP_WSBEiJ_G0033004.1 mouse_genomes_project 8 85257988 85269953 + MGP_WSBEiJ_P0088368 Farsa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088369.1 MGP_WSBEiJ_G0033004.1 mouse_genomes_project 8 85268259 85269707 + Farsa protein_coding retained_intron MGP_WSBEiJ_T0086725.1 MGP_WSBEiJ_G0032484.1 mouse_genomes_project 8 8517198 8659212 + MGP_WSBEiJ_P0086725 Col4a2 protein_coding protein_coding MGP_WSBEiJ_T0086726.1 MGP_WSBEiJ_G0032484.1 mouse_genomes_project 8 8613236 8629595 + MGP_WSBEiJ_P0086726 Col4a2 protein_coding protein_coding MGP_WSBEiJ_T0086727.1 MGP_WSBEiJ_G0032484.1 mouse_genomes_project 8 8651033 8653627 + Col4a2 protein_coding processed_transcript MGP_WSBEiJ_T0088193.1 MGP_WSBEiJ_G0032953.1 mouse_genomes_project 8 83035472 83046057 - MGP_WSBEiJ_P0088193 Zfp330 protein_coding protein_coding MGP_WSBEiJ_T0010846.1 MGP_WSBEiJ_G0009003.1 mouse_genomes_project 8 131459066 131459146 + Mir1903 miRNA miRNA MGP_WSBEiJ_T0088470.1 MGP_WSBEiJ_G0033032.1 mouse_genomes_project 8 85956644 85974247 - MGP_WSBEiJ_P0088470 Dnaja2 protein_coding protein_coding MGP_WSBEiJ_T0010768.1 MGP_WSBEiJ_G0008925.1 mouse_genomes_project 8 11243085 11243179 + miRNA miRNA MGP_WSBEiJ_T0087041.1 MGP_WSBEiJ_G0032600.1 mouse_genomes_project 8 22218535 22229844 + MGP_WSBEiJ_P0087041 protein_coding protein_coding MGP_WSBEiJ_T0005294.1 MGP_WSBEiJ_G0004484.1 mouse_genomes_project 8 84986797 84992733 - Gm16183 antisense antisense MGP_WSBEiJ_T0088271.1 MGP_WSBEiJ_G0032980.1 mouse_genomes_project 8 84409117 84410694 - MGP_WSBEiJ_P0088271 Gm10643 protein_coding protein_coding MGP_WSBEiJ_T0089642.1 MGP_WSBEiJ_G0033426.1 mouse_genomes_project 8 129969780 129995274 - MGP_WSBEiJ_P0089642 Rbm34 protein_coding protein_coding MGP_WSBEiJ_T0088814.1 MGP_WSBEiJ_G0033154.1 mouse_genomes_project 8 106637230 106642061 + Ces3b protein_coding retained_intron MGP_WSBEiJ_T0088815.1 MGP_WSBEiJ_G0033154.1 mouse_genomes_project 8 106637240 106650691 + MGP_WSBEiJ_P0088815 Ces3b protein_coding protein_coding MGP_WSBEiJ_T0098570.1 MGP_WSBEiJ_G0037233.1 mouse_genomes_project 8 124603404 124603511 + Gm24283 snRNA snRNA MGP_WSBEiJ_T0088962.1 MGP_WSBEiJ_G0033212.1 mouse_genomes_project 8 108186135 108237333 + MGP_WSBEiJ_P0088962 Cdh3 protein_coding protein_coding MGP_WSBEiJ_T0015459.1 MGP_WSBEiJ_G0013589.1 mouse_genomes_project 8 40766216 40768329 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086947.1 MGP_WSBEiJ_G0032557.1 mouse_genomes_project 8 18757540 18762801 - MGP_WSBEiJ_P0086947 Gm6040 protein_coding protein_coding MGP_WSBEiJ_T0086983.1 MGP_WSBEiJ_G0032580.1 mouse_genomes_project 8 20166119 20200735 + MGP_WSBEiJ_P0086983 Thsd1 protein_coding protein_coding MGP_WSBEiJ_T0086984.1 MGP_WSBEiJ_G0032580.1 mouse_genomes_project 8 20166151 20199781 + MGP_WSBEiJ_P0086984 Thsd1 protein_coding protein_coding MGP_WSBEiJ_T0086985.1 MGP_WSBEiJ_G0032580.1 mouse_genomes_project 8 20166168 20199779 + Thsd1 protein_coding processed_transcript MGP_WSBEiJ_T0087777.1 MGP_WSBEiJ_G0032825.1 mouse_genomes_project 8 70083304 70096225 - MGP_WSBEiJ_P0087777 Armc6 protein_coding protein_coding MGP_WSBEiJ_T0087778.1 MGP_WSBEiJ_G0032825.1 mouse_genomes_project 8 70083330 70085950 - Armc6 protein_coding retained_intron MGP_WSBEiJ_T0087779.1 MGP_WSBEiJ_G0032825.1 mouse_genomes_project 8 70083609 70085422 - Armc6 protein_coding retained_intron MGP_WSBEiJ_T0087780.1 MGP_WSBEiJ_G0032825.1 mouse_genomes_project 8 70086348 70088340 - Armc6 protein_coding retained_intron MGP_WSBEiJ_T0087781.1 MGP_WSBEiJ_G0032825.1 mouse_genomes_project 8 70087772 70096208 - Armc6 protein_coding retained_intron MGP_WSBEiJ_T0087782.1 MGP_WSBEiJ_G0032825.1 mouse_genomes_project 8 70088480 70095879 - MGP_WSBEiJ_P0087782 Armc6 protein_coding protein_coding MGP_WSBEiJ_T0017850.1 MGP_WSBEiJ_G0015129.1 mouse_genomes_project 8 23099604 23104304 + Gm16933 processed_transcript processed_transcript MGP_WSBEiJ_T0008964.1 MGP_WSBEiJ_G0007218.1 mouse_genomes_project 8 72482810 72495288 + Gm17435 lincRNA lincRNA MGP_WSBEiJ_T0087454.1 MGP_WSBEiJ_G0032727.1 mouse_genomes_project 8 46620654 46643058 + MGP_WSBEiJ_P0087454 Rwdd4a protein_coding protein_coding MGP_WSBEiJ_T0087455.1 MGP_WSBEiJ_G0032727.1 mouse_genomes_project 8 46620654 46641511 + MGP_WSBEiJ_P0087455 Rwdd4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087456.1 MGP_WSBEiJ_G0032727.1 mouse_genomes_project 8 46620676 46633917 + MGP_WSBEiJ_P0087456 Rwdd4a protein_coding protein_coding MGP_WSBEiJ_T0087457.1 MGP_WSBEiJ_G0032727.1 mouse_genomes_project 8 46638139 46641522 + Rwdd4a protein_coding processed_transcript MGP_WSBEiJ_T0087458.1 MGP_WSBEiJ_G0032727.1 mouse_genomes_project 8 46640689 46643188 + Rwdd4a protein_coding retained_intron MGP_WSBEiJ_T0087181.1 MGP_WSBEiJ_G0032645.1 mouse_genomes_project 8 29489905 29503487 + MGP_WSBEiJ_P0087181 Tti2 protein_coding protein_coding MGP_WSBEiJ_T0088033.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913776 71933884 + MGP_WSBEiJ_P0088033 Zfp961 protein_coding protein_coding MGP_WSBEiJ_T0088034.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913786 71933884 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088035.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913804 71933474 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088036.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913805 71931826 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088037.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913808 71931601 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088038.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913809 71931877 + MGP_WSBEiJ_P0088038 Zfp961 protein_coding protein_coding MGP_WSBEiJ_T0088039.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913815 71931717 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088040.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913818 71932066 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088041.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913819 71929790 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088042.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913819 71932527 + MGP_WSBEiJ_P0088042 Zfp961 protein_coding protein_coding MGP_WSBEiJ_T0088043.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913829 71957448 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088044.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71913829 71935268 + MGP_WSBEiJ_P0088044 Zfp961 protein_coding protein_coding MGP_WSBEiJ_T0088045.1 MGP_WSBEiJ_G0032897.1 mouse_genomes_project 8 71916171 71931724 + Zfp961 protein_coding processed_transcript MGP_WSBEiJ_T0088310.1 MGP_WSBEiJ_G0032994.1 mouse_genomes_project 8 85062264 85067279 - MGP_WSBEiJ_P0088310 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088589.1 MGP_WSBEiJ_G0033069.1 mouse_genomes_project 8 93750141 93777737 - MGP_WSBEiJ_P0088589 Ces1a protein_coding protein_coding MGP_WSBEiJ_T0097473.1 MGP_WSBEiJ_G0036142.1 mouse_genomes_project 8 125855147 125857285 + 2810013P06Rik sense_intronic sense_intronic MGP_WSBEiJ_T0010784.1 MGP_WSBEiJ_G0008941.1 mouse_genomes_project 8 64839868 64839952 - Gm23419 miRNA miRNA MGP_WSBEiJ_T0089023.1 MGP_WSBEiJ_G0033231.1 mouse_genomes_project 8 110505043 110606179 + MGP_WSBEiJ_P0089023 protein_coding protein_coding MGP_WSBEiJ_T0089024.1 MGP_WSBEiJ_G0033231.1 mouse_genomes_project 8 110597888 110779434 + MGP_WSBEiJ_P0089024 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009046.1 MGP_WSBEiJ_G0007276.1 mouse_genomes_project 8 124290959 124296450 + 1700030M09Rik lincRNA lincRNA MGP_WSBEiJ_T0009047.1 MGP_WSBEiJ_G0007276.1 mouse_genomes_project 8 124290965 124295759 + 1700030M09Rik lincRNA lincRNA MGP_WSBEiJ_T0089595.1 MGP_WSBEiJ_G0033405.1 mouse_genomes_project 8 127628790 127640190 - MGP_WSBEiJ_P0089595 Fam89a protein_coding protein_coding MGP_WSBEiJ_T0087419.1 MGP_WSBEiJ_G0032718.1 mouse_genomes_project 8 45517198 45588696 + MGP_WSBEiJ_P0087419 Acsl1 protein_coding protein_coding MGP_WSBEiJ_T0087420.1 MGP_WSBEiJ_G0032718.1 mouse_genomes_project 8 45517256 45563926 + Acsl1 protein_coding retained_intron MGP_WSBEiJ_T0087421.1 MGP_WSBEiJ_G0032718.1 mouse_genomes_project 8 45517340 45558420 + MGP_WSBEiJ_P0087421 Acsl1 protein_coding protein_coding MGP_WSBEiJ_T0087422.1 MGP_WSBEiJ_G0032718.1 mouse_genomes_project 8 45538168 45588226 + MGP_WSBEiJ_P0087422 Acsl1 protein_coding protein_coding MGP_WSBEiJ_T0087423.1 MGP_WSBEiJ_G0032718.1 mouse_genomes_project 8 45538168 45552735 + MGP_WSBEiJ_P0087423 Acsl1 protein_coding protein_coding MGP_WSBEiJ_T0087424.1 MGP_WSBEiJ_G0032718.1 mouse_genomes_project 8 45540028 45587125 + MGP_WSBEiJ_P0087424 Acsl1 protein_coding protein_coding MGP_WSBEiJ_T0087425.1 MGP_WSBEiJ_G0032718.1 mouse_genomes_project 8 45579404 45581283 + Acsl1 protein_coding retained_intron MGP_WSBEiJ_T0087426.1 MGP_WSBEiJ_G0032718.1 mouse_genomes_project 8 45583694 45587100 + MGP_WSBEiJ_P0087426 Acsl1 protein_coding protein_coding MGP_WSBEiJ_T0010780.1 MGP_WSBEiJ_G0008937.1 mouse_genomes_project 8 39117768 39117823 - Mir7666 miRNA miRNA MGP_WSBEiJ_T0097177.1 MGP_WSBEiJ_G0035858.1 mouse_genomes_project 8 69251090 69251386 + Gm25661 ribozyme ribozyme MGP_WSBEiJ_T0009031.1 MGP_WSBEiJ_G0007263.1 mouse_genomes_project 8 112806527 112887661 - Gm26816 lincRNA lincRNA MGP_WSBEiJ_T0089557.1 MGP_WSBEiJ_G0033392.1 mouse_genomes_project 8 126748448 126751417 - MGP_WSBEiJ_P0089557 Acta1 protein_coding protein_coding MGP_WSBEiJ_T0088674.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95724570 95746189 - MGP_WSBEiJ_P0088674 Ciapin1 protein_coding protein_coding MGP_WSBEiJ_T0088675.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95727309 95732329 - MGP_WSBEiJ_P0088675 Ciapin1 protein_coding protein_coding MGP_WSBEiJ_T0088676.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95727683 95728945 - Ciapin1 protein_coding retained_intron MGP_WSBEiJ_T0088677.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95727769 95732335 - Ciapin1 protein_coding processed_transcript MGP_WSBEiJ_T0088678.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95728459 95738860 - MGP_WSBEiJ_P0088678 Ciapin1 protein_coding protein_coding MGP_WSBEiJ_T0088679.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95729387 95732333 - Ciapin1 protein_coding retained_intron MGP_WSBEiJ_T0088680.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95729970 95737060 - Ciapin1 protein_coding processed_transcript MGP_WSBEiJ_T0088681.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95733688 95746096 - MGP_WSBEiJ_P0088681 Ciapin1 protein_coding protein_coding MGP_WSBEiJ_T0088682.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95737011 95746092 - Ciapin1 protein_coding processed_transcript MGP_WSBEiJ_T0088683.1 MGP_WSBEiJ_G0033099.1 mouse_genomes_project 8 95738853 95745873 - Ciapin1 protein_coding processed_transcript MGP_WSBEiJ_T0088109.1 MGP_WSBEiJ_G0032925.1 mouse_genomes_project 8 75080981 75099678 + MGP_WSBEiJ_P0088109 Mcm5 protein_coding protein_coding MGP_WSBEiJ_T0088051.1 MGP_WSBEiJ_G0032901.1 mouse_genomes_project 8 72106995 72116704 + Tpm4 protein_coding processed_transcript MGP_WSBEiJ_T0088052.1 MGP_WSBEiJ_G0032901.1 mouse_genomes_project 8 72107279 72127012 + MGP_WSBEiJ_P0088052 Tpm4 protein_coding protein_coding MGP_WSBEiJ_T0088817.1 MGP_WSBEiJ_G0033156.1 mouse_genomes_project 8 106751755 106803406 + MGP_WSBEiJ_P0088817 Cbfb protein_coding protein_coding MGP_WSBEiJ_T0088818.1 MGP_WSBEiJ_G0033156.1 mouse_genomes_project 8 106751825 106803398 + MGP_WSBEiJ_P0088818 Cbfb protein_coding protein_coding MGP_WSBEiJ_T0088819.1 MGP_WSBEiJ_G0033156.1 mouse_genomes_project 8 106751825 106803398 + MGP_WSBEiJ_P0088819 Cbfb protein_coding protein_coding MGP_WSBEiJ_T0088820.1 MGP_WSBEiJ_G0033156.1 mouse_genomes_project 8 106752064 106803398 + MGP_WSBEiJ_P0088820 Cbfb protein_coding protein_coding MGP_WSBEiJ_T0088821.1 MGP_WSBEiJ_G0033156.1 mouse_genomes_project 8 106752228 106761349 + Cbfb protein_coding retained_intron MGP_WSBEiJ_T0088822.1 MGP_WSBEiJ_G0033156.1 mouse_genomes_project 8 106752611 106777688 + Cbfb protein_coding processed_transcript MGP_WSBEiJ_T0088823.1 MGP_WSBEiJ_G0033156.1 mouse_genomes_project 8 106752683 106777668 + Cbfb protein_coding processed_transcript MGP_WSBEiJ_T0010840.1 MGP_WSBEiJ_G0008997.1 mouse_genomes_project 8 125416990 125417101 - Mir6396 miRNA miRNA MGP_WSBEiJ_T0098536.1 MGP_WSBEiJ_G0037199.1 mouse_genomes_project 8 44886161 44886287 - Gm25309 snRNA snRNA MGP_WSBEiJ_T0098574.1 MGP_WSBEiJ_G0037237.1 mouse_genomes_project 8 130074598 130074768 + Gm22730 snRNA snRNA MGP_WSBEiJ_T0098533.1 MGP_WSBEiJ_G0037196.1 mouse_genomes_project 8 35049168 35049319 - Gm26150 snRNA snRNA MGP_WSBEiJ_T0089029.1 MGP_WSBEiJ_G0033235.1 mouse_genomes_project 8 111430600 111434645 - MGP_WSBEiJ_P0089029 Hp protein_coding protein_coding MGP_WSBEiJ_T0088122.1 MGP_WSBEiJ_G0032929.1 mouse_genomes_project 8 77288349 77565596 - MGP_WSBEiJ_P0088122 Arhgap10 protein_coding protein_coding MGP_WSBEiJ_T0099781.1 MGP_WSBEiJ_G0038444.1 mouse_genomes_project 8 48153834 48153966 - Gm25830 snoRNA snoRNA MGP_WSBEiJ_T0088456.1 MGP_WSBEiJ_G0033027.1 mouse_genomes_project 8 85663793 85708592 - MGP_WSBEiJ_P0088456 Vps35 protein_coding protein_coding MGP_WSBEiJ_T0087577.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61093351 61496729 - MGP_WSBEiJ_P0087577 Palld protein_coding protein_coding MGP_WSBEiJ_T0087578.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61093353 61177455 - MGP_WSBEiJ_P0087578 Palld protein_coding protein_coding MGP_WSBEiJ_T0087579.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61093357 61354011 - MGP_WSBEiJ_P0087579 Palld protein_coding protein_coding MGP_WSBEiJ_T0087580.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61096084 61097060 - Palld protein_coding retained_intron MGP_WSBEiJ_T0087581.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61096180 61496750 - MGP_WSBEiJ_P0087581 Palld protein_coding protein_coding MGP_WSBEiJ_T0087582.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61097072 61177452 - MGP_WSBEiJ_P0087582 Palld protein_coding protein_coding MGP_WSBEiJ_T0087583.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61106267 61115402 - Palld protein_coding retained_intron MGP_WSBEiJ_T0087584.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61279431 61354020 - Palld protein_coding retained_intron MGP_WSBEiJ_T0087585.1 MGP_WSBEiJ_G0032766.1 mouse_genomes_project 8 61303167 61354011 - Palld protein_coding retained_intron MGP_WSBEiJ_T0005325.1 MGP_WSBEiJ_G0004511.1 mouse_genomes_project 8 126690421 126692654 - 2810455O05Rik antisense antisense MGP_WSBEiJ_T0089518.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126099458 126152552 - MGP_WSBEiJ_P0089518 Fanca protein_coding protein_coding MGP_WSBEiJ_T0089519.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126100448 126105383 - Fanca protein_coding processed_transcript MGP_WSBEiJ_T0089520.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126102364 126109570 - MGP_WSBEiJ_P0089520 Fanca protein_coding protein_coding MGP_WSBEiJ_T0089521.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126105317 126107713 - MGP_WSBEiJ_P0089521 Fanca protein_coding protein_coding MGP_WSBEiJ_T0089522.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126108576 126114342 - Fanca protein_coding retained_intron MGP_WSBEiJ_T0089523.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126117844 126152536 - Fanca protein_coding retained_intron MGP_WSBEiJ_T0089524.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126118063 126146181 - MGP_WSBEiJ_P0089524 Fanca protein_coding protein_coding MGP_WSBEiJ_T0089525.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126121019 126123510 - Fanca protein_coding retained_intron MGP_WSBEiJ_T0089526.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126136566 126152536 - MGP_WSBEiJ_P0089526 Fanca protein_coding protein_coding MGP_WSBEiJ_T0089527.1 MGP_WSBEiJ_G0033379.1 mouse_genomes_project 8 126145084 126152536 - Fanca protein_coding retained_intron MGP_WSBEiJ_T0087907.1 MGP_WSBEiJ_G0032864.1 mouse_genomes_project 8 70816890 70829472 + MGP_WSBEiJ_P0087907 Map1s protein_coding protein_coding MGP_WSBEiJ_T0088261.1 MGP_WSBEiJ_G0032976.1 mouse_genomes_project 8 84348893 84350830 - MGP_WSBEiJ_P0088261 2210011C24Rik protein_coding protein_coding MGP_WSBEiJ_T0088262.1 MGP_WSBEiJ_G0032976.1 mouse_genomes_project 8 84348910 84350083 - MGP_WSBEiJ_P0088262 2210011C24Rik protein_coding protein_coding MGP_WSBEiJ_T0088263.1 MGP_WSBEiJ_G0032976.1 mouse_genomes_project 8 84349438 84350083 - MGP_WSBEiJ_P0088263 2210011C24Rik protein_coding protein_coding MGP_WSBEiJ_T0088264.1 MGP_WSBEiJ_G0032976.1 mouse_genomes_project 8 84350115 84350843 - MGP_WSBEiJ_P0088264 2210011C24Rik protein_coding protein_coding MGP_WSBEiJ_T0088265.1 MGP_WSBEiJ_G0032976.1 mouse_genomes_project 8 84350123 84350828 - MGP_WSBEiJ_P0088265 2210011C24Rik protein_coding protein_coding MGP_WSBEiJ_T0087601.1 MGP_WSBEiJ_G0032770.1 mouse_genomes_project 8 63612013 63639444 - MGP_WSBEiJ_P0087601 Sgol2b protein_coding protein_coding MGP_WSBEiJ_T0087459.1 MGP_WSBEiJ_G0032728.1 mouse_genomes_project 8 46768835 46776814 - MGP_WSBEiJ_P0087459 Ing2 protein_coding protein_coding MGP_WSBEiJ_T0087460.1 MGP_WSBEiJ_G0032728.1 mouse_genomes_project 8 46768835 46775345 - MGP_WSBEiJ_P0087460 Ing2 protein_coding protein_coding MGP_WSBEiJ_T0087461.1 MGP_WSBEiJ_G0032728.1 mouse_genomes_project 8 46770412 46777212 - MGP_WSBEiJ_P0087461 Ing2 protein_coding protein_coding MGP_WSBEiJ_T0005288.1 MGP_WSBEiJ_G0004479.1 mouse_genomes_project 8 68255191 68256729 + Gm15656 antisense antisense MGP_WSBEiJ_T0098558.1 MGP_WSBEiJ_G0037221.1 mouse_genomes_project 8 98176359 98176461 + Gm25160 snRNA snRNA MGP_WSBEiJ_T0086954.1 MGP_WSBEiJ_G0032564.1 mouse_genomes_project 8 19620246 19645604 + MGP_WSBEiJ_P0086954 Defb1 protein_coding protein_coding MGP_WSBEiJ_T0010763.1 MGP_WSBEiJ_G0008920.1 mouse_genomes_project 8 8874397 8874440 - Mir7238 miRNA miRNA MGP_WSBEiJ_T0010829.1 MGP_WSBEiJ_G0008986.1 mouse_genomes_project 8 113005149 113005226 - Gm24103 miRNA miRNA MGP_WSBEiJ_T0089043.1 MGP_WSBEiJ_G0033238.1 mouse_genomes_project 8 111532409 111554321 - MGP_WSBEiJ_P0089043 Ist1 protein_coding protein_coding MGP_WSBEiJ_T0099760.1 MGP_WSBEiJ_G0038423.1 mouse_genomes_project 8 3206573 3206717 - Gm24288 snoRNA snoRNA MGP_WSBEiJ_T0089554.1 MGP_WSBEiJ_G0033390.1 mouse_genomes_project 8 126692699 126712394 - MGP_WSBEiJ_P0089554 Ccsap protein_coding protein_coding MGP_WSBEiJ_T0089555.1 MGP_WSBEiJ_G0033390.1 mouse_genomes_project 8 126692712 126713073 - MGP_WSBEiJ_P0089555 Ccsap protein_coding protein_coding MGP_WSBEiJ_T0089574.1 MGP_WSBEiJ_G0033399.1 mouse_genomes_project 8 127396475 127427696 + MGP_WSBEiJ_P0089574 Cog2 protein_coding protein_coding MGP_WSBEiJ_T0089575.1 MGP_WSBEiJ_G0033399.1 mouse_genomes_project 8 127396512 127405618 + MGP_WSBEiJ_P0089575 Cog2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089576.1 MGP_WSBEiJ_G0033399.1 mouse_genomes_project 8 127396513 127421461 + Cog2 protein_coding retained_intron MGP_WSBEiJ_T0089577.1 MGP_WSBEiJ_G0033399.1 mouse_genomes_project 8 127396527 127405590 + MGP_WSBEiJ_P0089577 Cog2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089578.1 MGP_WSBEiJ_G0033399.1 mouse_genomes_project 8 127410895 127420080 + Cog2 protein_coding retained_intron MGP_WSBEiJ_T0008953.1 MGP_WSBEiJ_G0007208.1 mouse_genomes_project 8 56742474 56751094 + lincRNA lincRNA MGP_WSBEiJ_T0087182.1 MGP_WSBEiJ_G0032646.1 mouse_genomes_project 8 29498591 29508372 - MGP_WSBEiJ_P0087182 Mak16 protein_coding protein_coding MGP_WSBEiJ_T0089594.1 MGP_WSBEiJ_G0033404.1 mouse_genomes_project 8 127607945 127621496 + MGP_WSBEiJ_P0089594 Arv1 protein_coding protein_coding MGP_WSBEiJ_T0087819.1 MGP_WSBEiJ_G0032831.1 mouse_genomes_project 8 70197255 70220187 - MGP_WSBEiJ_P0087819 Upf1 protein_coding protein_coding MGP_WSBEiJ_T0087820.1 MGP_WSBEiJ_G0032831.1 mouse_genomes_project 8 70198118 70219920 - MGP_WSBEiJ_P0087820 Upf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087156.1 MGP_WSBEiJ_G0032633.1 mouse_genomes_project 8 25273935 25314268 + MGP_WSBEiJ_P0087156 Adgra2 protein_coding protein_coding MGP_WSBEiJ_T0087157.1 MGP_WSBEiJ_G0032633.1 mouse_genomes_project 8 25273950 25314269 + MGP_WSBEiJ_P0087157 Adgra2 protein_coding protein_coding MGP_WSBEiJ_T0087158.1 MGP_WSBEiJ_G0032633.1 mouse_genomes_project 8 25305030 25309779 + MGP_WSBEiJ_P0087158 Adgra2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087159.1 MGP_WSBEiJ_G0032633.1 mouse_genomes_project 8 25308315 25312456 + MGP_WSBEiJ_P0087159 Adgra2 protein_coding protein_coding MGP_WSBEiJ_T0005273.1 MGP_WSBEiJ_G0004466.1 mouse_genomes_project 8 44002069 44007253 - Gm2366 antisense antisense MGP_WSBEiJ_T0087979.1 MGP_WSBEiJ_G0032883.1 mouse_genomes_project 8 71478371 71482944 - MGP_WSBEiJ_P0087979 Tmem221 protein_coding protein_coding MGP_WSBEiJ_T0086945.1 MGP_WSBEiJ_G0032556.1 mouse_genomes_project 8 18745616 18747455 - MGP_WSBEiJ_P0086945 Gm15056 protein_coding protein_coding MGP_WSBEiJ_T0086946.1 MGP_WSBEiJ_G0032556.1 mouse_genomes_project 8 18745616 18746984 - MGP_WSBEiJ_P0086946 Gm15056 protein_coding protein_coding MGP_WSBEiJ_T0087486.1 MGP_WSBEiJ_G0032739.1 mouse_genomes_project 8 52940259 52994793 - MGP_WSBEiJ_P0087486 Neil3 protein_coding protein_coding MGP_WSBEiJ_T0087487.1 MGP_WSBEiJ_G0032739.1 mouse_genomes_project 8 52962477 52969126 - Neil3 protein_coding processed_transcript MGP_WSBEiJ_T0087488.1 MGP_WSBEiJ_G0032739.1 mouse_genomes_project 8 52962477 52969180 - MGP_WSBEiJ_P0087488 Neil3 protein_coding protein_coding MGP_WSBEiJ_T0087489.1 MGP_WSBEiJ_G0032739.1 mouse_genomes_project 8 52962503 52970251 - MGP_WSBEiJ_P0087489 Neil3 protein_coding protein_coding MGP_WSBEiJ_T0087490.1 MGP_WSBEiJ_G0032739.1 mouse_genomes_project 8 52964012 52994694 - Neil3 protein_coding retained_intron MGP_WSBEiJ_T0087491.1 MGP_WSBEiJ_G0032739.1 mouse_genomes_project 8 52967196 52994406 - MGP_WSBEiJ_P0087491 Neil3 protein_coding protein_coding MGP_WSBEiJ_T0008929.1 MGP_WSBEiJ_G0007188.1 mouse_genomes_project 8 22483775 22501326 + Gm26714 lincRNA lincRNA MGP_WSBEiJ_T0097111.1 MGP_WSBEiJ_G0035792.1 mouse_genomes_project 8 46824964 46825088 + n-R5s96 rRNA rRNA MGP_WSBEiJ_T0086717.1 MGP_WSBEiJ_G0032479.1 mouse_genomes_project 8 7127788 7144481 + MGP_WSBEiJ_P0086717 Abhd13 protein_coding protein_coding MGP_WSBEiJ_T0086718.1 MGP_WSBEiJ_G0032479.1 mouse_genomes_project 8 7127798 7144481 + MGP_WSBEiJ_P0086718 Abhd13 protein_coding protein_coding MGP_WSBEiJ_T0099814.1 MGP_WSBEiJ_G0038477.1 mouse_genomes_project 8 113421200 113421332 + Gm24793 snoRNA snoRNA MGP_WSBEiJ_T0088177.1 MGP_WSBEiJ_G0032949.1 mouse_genomes_project 8 80958980 81079507 - MGP_WSBEiJ_P0088177 Gab1 protein_coding protein_coding MGP_WSBEiJ_T0008984.1 MGP_WSBEiJ_G0007235.1 mouse_genomes_project 8 87680014 87774173 + Gm27169 lincRNA lincRNA MGP_WSBEiJ_T0087468.1 MGP_WSBEiJ_G0032735.1 mouse_genomes_project 8 47231783 47279219 + MGP_WSBEiJ_P0087468 Dctd protein_coding protein_coding MGP_WSBEiJ_T0087469.1 MGP_WSBEiJ_G0032735.1 mouse_genomes_project 8 47245132 47280276 + MGP_WSBEiJ_P0087469 Dctd protein_coding protein_coding MGP_WSBEiJ_T0087470.1 MGP_WSBEiJ_G0032735.1 mouse_genomes_project 8 47245187 47280274 + MGP_WSBEiJ_P0087470 Dctd protein_coding protein_coding MGP_WSBEiJ_T0087471.1 MGP_WSBEiJ_G0032735.1 mouse_genomes_project 8 47245336 47280274 + MGP_WSBEiJ_P0087471 Dctd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087472.1 MGP_WSBEiJ_G0032735.1 mouse_genomes_project 8 47245339 47276301 + Dctd protein_coding retained_intron MGP_WSBEiJ_T0087473.1 MGP_WSBEiJ_G0032735.1 mouse_genomes_project 8 47245363 47277201 + Dctd protein_coding processed_transcript MGP_WSBEiJ_T0087474.1 MGP_WSBEiJ_G0032735.1 mouse_genomes_project 8 47245385 47293374 + MGP_WSBEiJ_P0087474 Dctd protein_coding protein_coding MGP_WSBEiJ_T0087874.1 MGP_WSBEiJ_G0032846.1 mouse_genomes_project 8 70529822 70545563 - MGP_WSBEiJ_P0087874 Pgpep1 protein_coding protein_coding MGP_WSBEiJ_T0008949.1 MGP_WSBEiJ_G0007204.1 mouse_genomes_project 8 44587249 44598329 - lincRNA lincRNA MGP_WSBEiJ_T0097112.1 MGP_WSBEiJ_G0035793.1 mouse_genomes_project 8 47021004 47021117 + n-R5s97 rRNA rRNA MGP_WSBEiJ_T0086728.1 MGP_WSBEiJ_G0032485.1 mouse_genomes_project 8 8663508 8693218 - MGP_WSBEiJ_P0086728 Rab20 protein_coding protein_coding MGP_WSBEiJ_T0015451.1 MGP_WSBEiJ_G0013581.1 mouse_genomes_project 8 21107254 21107509 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099790.1 MGP_WSBEiJ_G0038453.1 mouse_genomes_project 8 66708962 66709091 - Gm25275 snoRNA snoRNA MGP_WSBEiJ_T0089422.1 MGP_WSBEiJ_G0033353.1 mouse_genomes_project 8 125214949 125224778 - MGP_WSBEiJ_P0089422 Mvd protein_coding protein_coding MGP_WSBEiJ_T0101128.1 MGP_WSBEiJ_G0039585.1 mouse_genomes_project 8 100844179 100845568 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0088196.1 MGP_WSBEiJ_G0032956.1 mouse_genomes_project 8 83444508 83555121 + MGP_WSBEiJ_P0088196 Tbc1d9 protein_coding protein_coding MGP_WSBEiJ_T0088197.1 MGP_WSBEiJ_G0032956.1 mouse_genomes_project 8 83445016 83555634 + MGP_WSBEiJ_P0088197 Tbc1d9 protein_coding protein_coding MGP_WSBEiJ_T0088198.1 MGP_WSBEiJ_G0032956.1 mouse_genomes_project 8 83540945 83553648 + Tbc1d9 protein_coding retained_intron MGP_WSBEiJ_T0097113.1 MGP_WSBEiJ_G0035794.1 mouse_genomes_project 8 54258789 54258908 + n-R5s98 rRNA rRNA MGP_WSBEiJ_T0089337.1 MGP_WSBEiJ_G0033335.1 mouse_genomes_project 8 123797464 123801239 + MGP_WSBEiJ_P0089337 Foxf1 protein_coding protein_coding MGP_WSBEiJ_T0088276.1 MGP_WSBEiJ_G0032984.1 mouse_genomes_project 8 84470809 84477305 + MGP_WSBEiJ_P0088276 Podnl1 protein_coding protein_coding MGP_WSBEiJ_T0088277.1 MGP_WSBEiJ_G0032984.1 mouse_genomes_project 8 84472638 84477294 + Podnl1 protein_coding retained_intron MGP_WSBEiJ_T0086662.1 MGP_WSBEiJ_G0032460.1 mouse_genomes_project 8 1160138 1170528 + MGP_WSBEiJ_P0086662 Lrrc8e protein_coding protein_coding MGP_WSBEiJ_T0088894.1 MGP_WSBEiJ_G0033182.1 mouse_genomes_project 8 107318922 107321861 - MGP_WSBEiJ_P0088894 Acd protein_coding protein_coding MGP_WSBEiJ_T0010823.1 MGP_WSBEiJ_G0008980.1 mouse_genomes_project 8 108837508 108837590 - Mir7075 miRNA miRNA MGP_WSBEiJ_T0087271.1 MGP_WSBEiJ_G0032681.1 mouse_genomes_project 8 39086665 39094391 - MGP_WSBEiJ_P0087271 Fgf20 protein_coding protein_coding MGP_WSBEiJ_T0087272.1 MGP_WSBEiJ_G0032681.1 mouse_genomes_project 8 39087224 39118221 - MGP_WSBEiJ_P0087272 Fgf20 protein_coding protein_coding MGP_WSBEiJ_T0087475.1 MGP_WSBEiJ_G0032736.1 mouse_genomes_project 8 47374817 47578718 - MGP_WSBEiJ_P0087475 Tenm3 protein_coding protein_coding MGP_WSBEiJ_T0087476.1 MGP_WSBEiJ_G0032736.1 mouse_genomes_project 8 47376832 48024665 - MGP_WSBEiJ_P0087476 Tenm3 protein_coding protein_coding MGP_WSBEiJ_T0087477.1 MGP_WSBEiJ_G0032736.1 mouse_genomes_project 8 47376855 47845876 - MGP_WSBEiJ_P0087477 Tenm3 protein_coding protein_coding MGP_WSBEiJ_T0087478.1 MGP_WSBEiJ_G0032736.1 mouse_genomes_project 8 47427122 47452161 - Tenm3 protein_coding processed_transcript MGP_WSBEiJ_T0087479.1 MGP_WSBEiJ_G0032736.1 mouse_genomes_project 8 47488416 47719461 - MGP_WSBEiJ_P0087479 Tenm3 protein_coding protein_coding MGP_WSBEiJ_T0087480.1 MGP_WSBEiJ_G0032736.1 mouse_genomes_project 8 47552308 47719807 - MGP_WSBEiJ_P0087480 Tenm3 protein_coding protein_coding MGP_WSBEiJ_T0087481.1 MGP_WSBEiJ_G0032736.1 mouse_genomes_project 8 47552308 47719614 - MGP_WSBEiJ_P0087481 Tenm3 protein_coding protein_coding MGP_WSBEiJ_T0087678.1 MGP_WSBEiJ_G0032795.1 mouse_genomes_project 8 68910112 68935388 + MGP_WSBEiJ_P0087678 Atp6v1b2 protein_coding protein_coding MGP_WSBEiJ_T0087679.1 MGP_WSBEiJ_G0032795.1 mouse_genomes_project 8 68910234 68929049 + Atp6v1b2 protein_coding retained_intron MGP_WSBEiJ_T0087680.1 MGP_WSBEiJ_G0032795.1 mouse_genomes_project 8 68910253 68923824 + Atp6v1b2 protein_coding retained_intron MGP_WSBEiJ_T0087681.1 MGP_WSBEiJ_G0032795.1 mouse_genomes_project 8 68910255 68918183 + Atp6v1b2 protein_coding retained_intron MGP_WSBEiJ_T0087682.1 MGP_WSBEiJ_G0032795.1 mouse_genomes_project 8 68923787 68924636 + Atp6v1b2 protein_coding retained_intron MGP_WSBEiJ_T0087683.1 MGP_WSBEiJ_G0032795.1 mouse_genomes_project 8 68924700 68930022 + Atp6v1b2 protein_coding retained_intron MGP_WSBEiJ_T0008978.1 MGP_WSBEiJ_G0007230.1 mouse_genomes_project 8 87362289 87382155 + Gm27167 lincRNA lincRNA MGP_WSBEiJ_T0089318.1 MGP_WSBEiJ_G0033332.1 mouse_genomes_project 8 123307614 123324345 - MGP_WSBEiJ_P0089318 Emc8 protein_coding protein_coding MGP_WSBEiJ_T0089319.1 MGP_WSBEiJ_G0033332.1 mouse_genomes_project 8 123309677 123324379 - Emc8 protein_coding retained_intron MGP_WSBEiJ_T0089320.1 MGP_WSBEiJ_G0033332.1 mouse_genomes_project 8 123311549 123324940 - MGP_WSBEiJ_P0089320 Emc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089321.1 MGP_WSBEiJ_G0033332.1 mouse_genomes_project 8 123311722 123324130 - MGP_WSBEiJ_P0089321 Emc8 protein_coding protein_coding MGP_WSBEiJ_T0089322.1 MGP_WSBEiJ_G0033332.1 mouse_genomes_project 8 123311748 123324203 - MGP_WSBEiJ_P0089322 Emc8 protein_coding protein_coding MGP_WSBEiJ_T0089323.1 MGP_WSBEiJ_G0033332.1 mouse_genomes_project 8 123313675 123324370 - MGP_WSBEiJ_P0089323 Emc8 protein_coding protein_coding MGP_WSBEiJ_T0089324.1 MGP_WSBEiJ_G0033332.1 mouse_genomes_project 8 123314348 123324480 - Emc8 protein_coding retained_intron MGP_WSBEiJ_T0087300.1 MGP_WSBEiJ_G0032687.1 mouse_genomes_project 8 39496132 39503147 + MGP_WSBEiJ_P0087300 Adam24 protein_coding protein_coding MGP_WSBEiJ_T0008998.1 MGP_WSBEiJ_G0007243.1 mouse_genomes_project 8 88697716 88698191 + 9430002A10Rik lincRNA lincRNA MGP_WSBEiJ_T0008999.1 MGP_WSBEiJ_G0007243.1 mouse_genomes_project 8 88697716 88698185 + 9430002A10Rik lincRNA lincRNA MGP_WSBEiJ_T0005277.1 MGP_WSBEiJ_G0004470.1 mouse_genomes_project 8 53963397 54000603 - 5330439A09Rik antisense antisense MGP_WSBEiJ_T0088938.1 MGP_WSBEiJ_G0033203.1 mouse_genomes_project 8 107726875 107801681 + MGP_WSBEiJ_P0088938 Nfatc3 protein_coding protein_coding MGP_WSBEiJ_T0088939.1 MGP_WSBEiJ_G0033203.1 mouse_genomes_project 8 107727163 107790825 + MGP_WSBEiJ_P0088939 Nfatc3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087908.1 MGP_WSBEiJ_G0032865.1 mouse_genomes_project 8 70842653 70844260 + MGP_WSBEiJ_P0087908 protein_coding protein_coding MGP_WSBEiJ_T0087870.1 MGP_WSBEiJ_G0032843.1 mouse_genomes_project 8 70475643 70486414 - MGP_WSBEiJ_P0087870 Ssbp4 protein_coding protein_coding MGP_WSBEiJ_T0088077.1 MGP_WSBEiJ_G0032915.1 mouse_genomes_project 8 72559189 72564880 - MGP_WSBEiJ_P0088077 Smim7 protein_coding protein_coding MGP_WSBEiJ_T0088078.1 MGP_WSBEiJ_G0032915.1 mouse_genomes_project 8 72561492 72564841 - MGP_WSBEiJ_P0088078 Smim7 protein_coding protein_coding MGP_WSBEiJ_T0088079.1 MGP_WSBEiJ_G0032915.1 mouse_genomes_project 8 72564379 72564854 - Smim7 protein_coding retained_intron MGP_WSBEiJ_T0099769.1 MGP_WSBEiJ_G0038432.1 mouse_genomes_project 8 16415036 16415139 + Gm22551 snoRNA snoRNA MGP_WSBEiJ_T0086677.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1192797 1210121 - Timm44 protein_coding retained_intron MGP_WSBEiJ_T0086678.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1192797 1210149 - MGP_WSBEiJ_P0086678 Timm44 protein_coding protein_coding MGP_WSBEiJ_T0086679.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1192815 1210107 - MGP_WSBEiJ_P0086679 Timm44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086680.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1193050 1193802 - Timm44 protein_coding retained_intron MGP_WSBEiJ_T0086681.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1193166 1200084 - Timm44 protein_coding retained_intron MGP_WSBEiJ_T0086682.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1199151 1200021 - Timm44 protein_coding retained_intron MGP_WSBEiJ_T0086683.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1199332 1200701 - Timm44 protein_coding retained_intron MGP_WSBEiJ_T0086684.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1200382 1210118 - Timm44 protein_coding processed_transcript MGP_WSBEiJ_T0086685.1 MGP_WSBEiJ_G0032465.1 mouse_genomes_project 8 1200440 1210109 - Timm44 protein_coding retained_intron MGP_WSBEiJ_T0089263.1 MGP_WSBEiJ_G0033316.1 mouse_genomes_project 8 122179387 122183577 + MGP_WSBEiJ_P0089263 Adad2 protein_coding protein_coding MGP_WSBEiJ_T0087898.1 MGP_WSBEiJ_G0032857.1 mouse_genomes_project 8 70714554 70729005 + MGP_WSBEiJ_P0087898 Il12rb1 protein_coding protein_coding MGP_WSBEiJ_T0086706.1 MGP_WSBEiJ_G0032470.1 mouse_genomes_project 8 1626991 1627817 - MGP_WSBEiJ_P0086706 protein_coding protein_coding MGP_WSBEiJ_T0088519.1 MGP_WSBEiJ_G0033045.1 mouse_genomes_project 8 88725261 88790779 + MGP_WSBEiJ_P0088519 Papd5 protein_coding protein_coding MGP_WSBEiJ_T0088520.1 MGP_WSBEiJ_G0033045.1 mouse_genomes_project 8 88725261 88790779 + MGP_WSBEiJ_P0088520 Papd5 protein_coding protein_coding MGP_WSBEiJ_T0088521.1 MGP_WSBEiJ_G0033045.1 mouse_genomes_project 8 88725262 88790780 + MGP_WSBEiJ_P0088521 Papd5 protein_coding protein_coding MGP_WSBEiJ_T0088522.1 MGP_WSBEiJ_G0033045.1 mouse_genomes_project 8 88776984 88780844 + Papd5 protein_coding retained_intron MGP_WSBEiJ_T0088523.1 MGP_WSBEiJ_G0033045.1 mouse_genomes_project 8 88783625 88789051 + MGP_WSBEiJ_P0088523 Papd5 protein_coding protein_coding MGP_WSBEiJ_T0008985.1 MGP_WSBEiJ_G0007236.1 mouse_genomes_project 8 87836125 87854669 - Gm27207 lincRNA lincRNA MGP_WSBEiJ_T0015482.1 MGP_WSBEiJ_G0013612.1 mouse_genomes_project 8 82035053 82035404 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088417.1 MGP_WSBEiJ_G0033016.1 mouse_genomes_project 8 85433854 85442114 - MGP_WSBEiJ_P0088417 Asna1 protein_coding protein_coding MGP_WSBEiJ_T0088255.1 MGP_WSBEiJ_G0032973.1 mouse_genomes_project 8 84306767 84333616 + MGP_WSBEiJ_P0088255 Prkaca protein_coding protein_coding MGP_WSBEiJ_T0087160.1 MGP_WSBEiJ_G0032634.1 mouse_genomes_project 8 25314665 25319470 - MGP_WSBEiJ_P0087160 Brf2 protein_coding protein_coding MGP_WSBEiJ_T0087966.1 MGP_WSBEiJ_G0032877.1 mouse_genomes_project 8 71391666 71403036 - MGP_WSBEiJ_P0087966 Ano8 protein_coding protein_coding MGP_WSBEiJ_T0009052.1 MGP_WSBEiJ_G0007280.1 mouse_genomes_project 8 125043838 125046930 + Gm22 lincRNA lincRNA MGP_WSBEiJ_T0009053.1 MGP_WSBEiJ_G0007280.1 mouse_genomes_project 8 125043838 125046934 + Gm22 lincRNA lincRNA MGP_WSBEiJ_T0009054.1 MGP_WSBEiJ_G0007281.1 mouse_genomes_project 8 126061786 126070909 + 4933417D19Rik lincRNA lincRNA MGP_WSBEiJ_T0088066.1 MGP_WSBEiJ_G0032908.1 mouse_genomes_project 8 72294242 72296865 + MGP_WSBEiJ_P0088066 Klf2 protein_coding protein_coding MGP_WSBEiJ_T0011523.1 MGP_WSBEiJ_G0009680.1 mouse_genomes_project 8 88128208 88128563 + Gm24841 misc_RNA misc_RNA MGP_WSBEiJ_T0088644.1 MGP_WSBEiJ_G0033089.1 mouse_genomes_project 8 95274984 95283963 + MGP_WSBEiJ_P0088644 Herpud1 protein_coding protein_coding MGP_WSBEiJ_T0088645.1 MGP_WSBEiJ_G0033089.1 mouse_genomes_project 8 95275041 95283944 + MGP_WSBEiJ_P0088645 Herpud1 protein_coding protein_coding MGP_WSBEiJ_T0088646.1 MGP_WSBEiJ_G0033089.1 mouse_genomes_project 8 95276099 95281015 + Herpud1 protein_coding processed_transcript MGP_WSBEiJ_T0088647.1 MGP_WSBEiJ_G0033089.1 mouse_genomes_project 8 95276145 95280855 + Herpud1 protein_coding processed_transcript MGP_WSBEiJ_T0088648.1 MGP_WSBEiJ_G0033089.1 mouse_genomes_project 8 95282116 95283495 + Herpud1 protein_coding retained_intron MGP_WSBEiJ_T0010819.1 MGP_WSBEiJ_G0008976.1 mouse_genomes_project 8 106897803 106897912 - Gm27320 miRNA miRNA MGP_WSBEiJ_T0088114.1 MGP_WSBEiJ_G0032928.1 mouse_genomes_project 8 76923953 76934005 + MGP_WSBEiJ_P0088114 Nr3c2 protein_coding protein_coding MGP_WSBEiJ_T0088115.1 MGP_WSBEiJ_G0032928.1 mouse_genomes_project 8 76924283 77282994 + MGP_WSBEiJ_P0088115 Nr3c2 protein_coding protein_coding MGP_WSBEiJ_T0088116.1 MGP_WSBEiJ_G0032928.1 mouse_genomes_project 8 76926810 77282989 + MGP_WSBEiJ_P0088116 Nr3c2 protein_coding protein_coding MGP_WSBEiJ_T0088117.1 MGP_WSBEiJ_G0032928.1 mouse_genomes_project 8 76926810 77280978 + MGP_WSBEiJ_P0088117 Nr3c2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088118.1 MGP_WSBEiJ_G0032928.1 mouse_genomes_project 8 76926869 76934248 + MGP_WSBEiJ_P0088118 Nr3c2 protein_coding protein_coding MGP_WSBEiJ_T0088119.1 MGP_WSBEiJ_G0032928.1 mouse_genomes_project 8 76926998 77281645 + MGP_WSBEiJ_P0088119 Nr3c2 protein_coding protein_coding MGP_WSBEiJ_T0088120.1 MGP_WSBEiJ_G0032928.1 mouse_genomes_project 8 76933863 77280512 + MGP_WSBEiJ_P0088120 Nr3c2 protein_coding protein_coding MGP_WSBEiJ_T0088121.1 MGP_WSBEiJ_G0032928.1 mouse_genomes_project 8 77162178 77220996 + Nr3c2 protein_coding processed_transcript MGP_WSBEiJ_T0089022.1 MGP_WSBEiJ_G0033230.1 mouse_genomes_project 8 109351236 109360428 - MGP_WSBEiJ_P0089022 Psmd7 protein_coding protein_coding MGP_WSBEiJ_T0099804.1 MGP_WSBEiJ_G0038467.1 mouse_genomes_project 8 91721090 91721222 - Gm22428 snoRNA snoRNA MGP_WSBEiJ_T0087586.1 MGP_WSBEiJ_G0032767.1 mouse_genomes_project 8 61522166 61559383 + MGP_WSBEiJ_P0087586 Ddx60 protein_coding protein_coding MGP_WSBEiJ_T0087587.1 MGP_WSBEiJ_G0032767.1 mouse_genomes_project 8 61522168 61638903 + MGP_WSBEiJ_P0087587 Ddx60 protein_coding protein_coding MGP_WSBEiJ_T0087588.1 MGP_WSBEiJ_G0032767.1 mouse_genomes_project 8 61522168 61638909 + MGP_WSBEiJ_P0087588 Ddx60 protein_coding protein_coding MGP_WSBEiJ_T0087589.1 MGP_WSBEiJ_G0032767.1 mouse_genomes_project 8 61522168 61535350 + MGP_WSBEiJ_P0087589 Ddx60 protein_coding protein_coding MGP_WSBEiJ_T0087590.1 MGP_WSBEiJ_G0032767.1 mouse_genomes_project 8 61585964 61590134 + Ddx60 protein_coding retained_intron MGP_WSBEiJ_T0087591.1 MGP_WSBEiJ_G0032767.1 mouse_genomes_project 8 61624302 61626688 + Ddx60 protein_coding retained_intron MGP_WSBEiJ_T0087592.1 MGP_WSBEiJ_G0032767.1 mouse_genomes_project 8 61627898 61631897 + Ddx60 protein_coding retained_intron MGP_WSBEiJ_T0089230.1 MGP_WSBEiJ_G0033305.1 mouse_genomes_project 8 120251231 120262478 - MGP_WSBEiJ_P0089230 Mphosph6 protein_coding protein_coding MGP_WSBEiJ_T0098537.1 MGP_WSBEiJ_G0037200.1 mouse_genomes_project 8 45313999 45314096 + Gm24669 snRNA snRNA MGP_WSBEiJ_T0087151.1 MGP_WSBEiJ_G0032630.1 mouse_genomes_project 8 25160246 25164387 + MGP_WSBEiJ_P0087151 Zfp703 protein_coding protein_coding MGP_WSBEiJ_T0087152.1 MGP_WSBEiJ_G0032630.1 mouse_genomes_project 8 25160246 25164387 + MGP_WSBEiJ_P0087152 Zfp703 protein_coding protein_coding MGP_WSBEiJ_T0008932.1 MGP_WSBEiJ_G0007191.1 mouse_genomes_project 8 25832614 25850815 + Gm1698 lincRNA lincRNA MGP_WSBEiJ_T0097106.1 MGP_WSBEiJ_G0035787.1 mouse_genomes_project 8 2267852 2267971 - n-R5s94 rRNA rRNA MGP_WSBEiJ_T0089315.1 MGP_WSBEiJ_G0033331.1 mouse_genomes_project 8 123255462 123324446 - MGP_WSBEiJ_P0089315 Gm27021 protein_coding protein_coding MGP_WSBEiJ_T0089136.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113551670 113647351 + MGP_WSBEiJ_P0089136 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089137.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113552088 113644071 + MGP_WSBEiJ_P0089137 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089138.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113552167 113647661 + MGP_WSBEiJ_P0089138 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089139.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113552167 113647661 + MGP_WSBEiJ_P0089139 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089140.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113552369 113645409 + MGP_WSBEiJ_P0089140 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089141.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113552649 113644586 + MGP_WSBEiJ_P0089141 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089142.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113552992 113643549 + MGP_WSBEiJ_P0089142 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089143.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113553016 113644114 + MGP_WSBEiJ_P0089143 Znrf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089144.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113553871 113644184 + MGP_WSBEiJ_P0089144 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089145.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113553871 113647661 + MGP_WSBEiJ_P0089145 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089146.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113553993 113630730 + Znrf1 protein_coding processed_transcript MGP_WSBEiJ_T0089147.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113556781 113643277 + MGP_WSBEiJ_P0089147 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0089148.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113577969 113628168 + Znrf1 protein_coding processed_transcript MGP_WSBEiJ_T0089149.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113628119 113644575 + MGP_WSBEiJ_P0089149 Znrf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089150.1 MGP_WSBEiJ_G0033269.1 mouse_genomes_project 8 113630661 113643388 + MGP_WSBEiJ_P0089150 Znrf1 protein_coding protein_coding MGP_WSBEiJ_T0087075.1 MGP_WSBEiJ_G0032609.1 mouse_genomes_project 8 23078303 23083709 + MGP_WSBEiJ_P0087075 Tm2d2 protein_coding protein_coding MGP_WSBEiJ_T0088509.1 MGP_WSBEiJ_G0033043.1 mouse_genomes_project 8 88640257 88656548 + MGP_WSBEiJ_P0088509 Cnep1r1 protein_coding protein_coding MGP_WSBEiJ_T0088510.1 MGP_WSBEiJ_G0033043.1 mouse_genomes_project 8 88640266 88652296 + Cnep1r1 protein_coding processed_transcript MGP_WSBEiJ_T0088511.1 MGP_WSBEiJ_G0033043.1 mouse_genomes_project 8 88640275 88656552 + MGP_WSBEiJ_P0088511 Cnep1r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088512.1 MGP_WSBEiJ_G0033043.1 mouse_genomes_project 8 88640288 88655922 + Cnep1r1 protein_coding retained_intron MGP_WSBEiJ_T0088513.1 MGP_WSBEiJ_G0033043.1 mouse_genomes_project 8 88640288 88653129 + MGP_WSBEiJ_P0088513 Cnep1r1 protein_coding protein_coding MGP_WSBEiJ_T0088514.1 MGP_WSBEiJ_G0033043.1 mouse_genomes_project 8 88640295 88652512 + MGP_WSBEiJ_P0088514 Cnep1r1 protein_coding protein_coding MGP_WSBEiJ_T0088359.1 MGP_WSBEiJ_G0033002.1 mouse_genomes_project 8 85242303 85247389 - MGP_WSBEiJ_P0088359 Calr protein_coding protein_coding MGP_WSBEiJ_T0088360.1 MGP_WSBEiJ_G0033002.1 mouse_genomes_project 8 85243046 85245370 - Calr protein_coding retained_intron MGP_WSBEiJ_T0088361.1 MGP_WSBEiJ_G0033002.1 mouse_genomes_project 8 85245890 85247285 - Calr protein_coding retained_intron MGP_WSBEiJ_T0088362.1 MGP_WSBEiJ_G0033002.1 mouse_genomes_project 8 85246204 85247281 - Calr protein_coding retained_intron MGP_WSBEiJ_T0088459.1 MGP_WSBEiJ_G0033029.1 mouse_genomes_project 8 85737765 85776137 - MGP_WSBEiJ_P0088459 Mylk3 protein_coding protein_coding MGP_WSBEiJ_T0088460.1 MGP_WSBEiJ_G0033029.1 mouse_genomes_project 8 85737909 85793114 - MGP_WSBEiJ_P0088460 Mylk3 protein_coding protein_coding MGP_WSBEiJ_T0088461.1 MGP_WSBEiJ_G0033029.1 mouse_genomes_project 8 85740532 85776160 - MGP_WSBEiJ_P0088461 Mylk3 protein_coding protein_coding MGP_WSBEiJ_T0088462.1 MGP_WSBEiJ_G0033029.1 mouse_genomes_project 8 85769147 85798296 - MGP_WSBEiJ_P0088462 Mylk3 protein_coding protein_coding MGP_WSBEiJ_T0088463.1 MGP_WSBEiJ_G0033029.1 mouse_genomes_project 8 85770322 85793170 - Mylk3 protein_coding retained_intron MGP_WSBEiJ_T0010810.1 MGP_WSBEiJ_G0008967.1 mouse_genomes_project 8 86131654 86131771 + Mir8109 miRNA miRNA MGP_WSBEiJ_T0088856.1 MGP_WSBEiJ_G0033169.1 mouse_genomes_project 8 106918456 106940066 - Fhod1 protein_coding retained_intron MGP_WSBEiJ_T0088857.1 MGP_WSBEiJ_G0033169.1 mouse_genomes_project 8 106918456 106940110 - MGP_WSBEiJ_P0088857 Fhod1 protein_coding protein_coding MGP_WSBEiJ_T0088858.1 MGP_WSBEiJ_G0033169.1 mouse_genomes_project 8 106920231 106920858 - Fhod1 protein_coding retained_intron MGP_WSBEiJ_T0088859.1 MGP_WSBEiJ_G0033169.1 mouse_genomes_project 8 106927224 106928579 - Fhod1 protein_coding retained_intron MGP_WSBEiJ_T0088845.1 MGP_WSBEiJ_G0033163.1 mouse_genomes_project 8 106869464 106879560 - MGP_WSBEiJ_P0088845 4931428F04Rik protein_coding protein_coding MGP_WSBEiJ_T0088846.1 MGP_WSBEiJ_G0033163.1 mouse_genomes_project 8 106869464 106879560 - MGP_WSBEiJ_P0088846 4931428F04Rik protein_coding protein_coding MGP_WSBEiJ_T0089066.1 MGP_WSBEiJ_G0033251.1 mouse_genomes_project 8 112168233 112542068 + MGP_WSBEiJ_P0089066 Hydin protein_coding protein_coding MGP_WSBEiJ_T0089067.1 MGP_WSBEiJ_G0033251.1 mouse_genomes_project 8 112168239 112541872 + MGP_WSBEiJ_P0089067 Hydin protein_coding unknown_likely_coding MGP_WSBEiJ_T0086708.1 MGP_WSBEiJ_G0032472.1 mouse_genomes_project 8 2035039 2054492 - MGP_WSBEiJ_P0086708 Slc10a2 protein_coding protein_coding MGP_WSBEiJ_T0089596.1 MGP_WSBEiJ_G0033406.1 mouse_genomes_project 8 127687220 127731978 + MGP_WSBEiJ_P0089596 Trim67 protein_coding protein_coding MGP_WSBEiJ_T0089597.1 MGP_WSBEiJ_G0033406.1 mouse_genomes_project 8 127687293 127732142 + MGP_WSBEiJ_P0089597 Trim67 protein_coding protein_coding MGP_WSBEiJ_T0088551.1 MGP_WSBEiJ_G0033057.1 mouse_genomes_project 8 91560222 91560699 - MGP_WSBEiJ_P0088551 protein_coding protein_coding MGP_WSBEiJ_T0088649.1 MGP_WSBEiJ_G0033090.1 mouse_genomes_project 8 95333539 95427881 + MGP_WSBEiJ_P0088649 Nlrc5 protein_coding protein_coding MGP_WSBEiJ_T0088650.1 MGP_WSBEiJ_G0033090.1 mouse_genomes_project 8 95372341 95406931 + Nlrc5 protein_coding retained_intron MGP_WSBEiJ_T0088651.1 MGP_WSBEiJ_G0033090.1 mouse_genomes_project 8 95379372 95388934 + MGP_WSBEiJ_P0088651 Nlrc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088652.1 MGP_WSBEiJ_G0033090.1 mouse_genomes_project 8 95422338 95424128 + Nlrc5 protein_coding retained_intron MGP_WSBEiJ_T0088653.1 MGP_WSBEiJ_G0033090.1 mouse_genomes_project 8 95425685 95427887 + Nlrc5 protein_coding retained_intron MGP_WSBEiJ_T0088654.1 MGP_WSBEiJ_G0033090.1 mouse_genomes_project 8 95425685 95427883 + MGP_WSBEiJ_P0088654 Nlrc5 protein_coding protein_coding MGP_WSBEiJ_T0089448.1 MGP_WSBEiJ_G0033360.1 mouse_genomes_project 8 125368146 125405064 - MGP_WSBEiJ_P0089448 Galns protein_coding protein_coding MGP_WSBEiJ_T0009030.1 MGP_WSBEiJ_G0007262.1 mouse_genomes_project 8 112166504 112168719 - Gm26832 lincRNA lincRNA MGP_WSBEiJ_T0005298.1 MGP_WSBEiJ_G0004488.1 mouse_genomes_project 8 100066611 100089886 + Gm15679 antisense antisense MGP_WSBEiJ_T0088925.1 MGP_WSBEiJ_G0033199.1 mouse_genomes_project 8 107628327 107634227 - MGP_WSBEiJ_P0088925 Dpep3 protein_coding protein_coding MGP_WSBEiJ_T0086676.1 MGP_WSBEiJ_G0032464.1 mouse_genomes_project 8 1190714 1192341 - MGP_WSBEiJ_P0086676 Ctxn1 protein_coding protein_coding MGP_WSBEiJ_T0089130.1 MGP_WSBEiJ_G0033267.1 mouse_genomes_project 8 113337479 113358786 - Fa2h protein_coding processed_transcript MGP_WSBEiJ_T0089131.1 MGP_WSBEiJ_G0033267.1 mouse_genomes_project 8 113337485 113390336 - MGP_WSBEiJ_P0089131 Fa2h protein_coding protein_coding MGP_WSBEiJ_T0089132.1 MGP_WSBEiJ_G0033267.1 mouse_genomes_project 8 113338110 113340403 - Fa2h protein_coding processed_transcript MGP_WSBEiJ_T0089133.1 MGP_WSBEiJ_G0033267.1 mouse_genomes_project 8 113339815 113390330 - Fa2h protein_coding retained_intron MGP_WSBEiJ_T0011530.1 MGP_WSBEiJ_G0009687.1 mouse_genomes_project 8 123381974 123382229 - Gm24239 misc_RNA misc_RNA MGP_WSBEiJ_T0087203.1 MGP_WSBEiJ_G0032658.1 mouse_genomes_project 8 32150400 32201361 + MGP_WSBEiJ_P0087203 Gtf2e2 protein_coding protein_coding MGP_WSBEiJ_T0087204.1 MGP_WSBEiJ_G0032658.1 mouse_genomes_project 8 32150609 32201361 + MGP_WSBEiJ_P0087204 Gtf2e2 protein_coding protein_coding MGP_WSBEiJ_T0087205.1 MGP_WSBEiJ_G0032658.1 mouse_genomes_project 8 32150700 32175297 + MGP_WSBEiJ_P0087205 Gtf2e2 protein_coding protein_coding MGP_WSBEiJ_T0087206.1 MGP_WSBEiJ_G0032658.1 mouse_genomes_project 8 32150878 32156061 + MGP_WSBEiJ_P0087206 Gtf2e2 protein_coding protein_coding MGP_WSBEiJ_T0087207.1 MGP_WSBEiJ_G0032658.1 mouse_genomes_project 8 32150906 32201370 + MGP_WSBEiJ_P0087207 Gtf2e2 protein_coding protein_coding MGP_WSBEiJ_T0087208.1 MGP_WSBEiJ_G0032658.1 mouse_genomes_project 8 32152011 32181346 + MGP_WSBEiJ_P0087208 Gtf2e2 protein_coding protein_coding MGP_WSBEiJ_T0087210.1 MGP_WSBEiJ_G0032658.1 mouse_genomes_project 8 32187732 32200975 + Gtf2e2 protein_coding processed_transcript MGP_WSBEiJ_T0010838.1 MGP_WSBEiJ_G0008995.1 mouse_genomes_project 8 123797687 123797785 - Gm27530 miRNA miRNA MGP_WSBEiJ_T0010837.1 MGP_WSBEiJ_G0008994.1 mouse_genomes_project 8 123183733 123183792 + Mir7687 miRNA miRNA MGP_WSBEiJ_T0088132.1 MGP_WSBEiJ_G0032933.1 mouse_genomes_project 8 78279204 78286880 + MGP_WSBEiJ_P0088132 Ttc29 protein_coding protein_coding MGP_WSBEiJ_T0088133.1 MGP_WSBEiJ_G0032933.1 mouse_genomes_project 8 78279209 78286738 + MGP_WSBEiJ_P0088133 Ttc29 protein_coding protein_coding MGP_WSBEiJ_T0088134.1 MGP_WSBEiJ_G0032933.1 mouse_genomes_project 8 78279222 78283920 + Ttc29 protein_coding processed_transcript MGP_WSBEiJ_T0088135.1 MGP_WSBEiJ_G0032933.1 mouse_genomes_project 8 78279249 78472409 + MGP_WSBEiJ_P0088135 Ttc29 protein_coding protein_coding MGP_WSBEiJ_T0088136.1 MGP_WSBEiJ_G0032933.1 mouse_genomes_project 8 78279257 78283864 + Ttc29 protein_coding processed_transcript MGP_WSBEiJ_T0088137.1 MGP_WSBEiJ_G0032933.1 mouse_genomes_project 8 78284696 78471766 + MGP_WSBEiJ_P0088137 Ttc29 protein_coding protein_coding MGP_WSBEiJ_T0088138.1 MGP_WSBEiJ_G0032933.1 mouse_genomes_project 8 78320853 78346136 + Ttc29 protein_coding retained_intron MGP_WSBEiJ_T0088139.1 MGP_WSBEiJ_G0032933.1 mouse_genomes_project 8 78467378 78471857 + Ttc29 protein_coding processed_transcript MGP_WSBEiJ_T0087167.1 MGP_WSBEiJ_G0032638.1 mouse_genomes_project 8 25463637 25480130 + MGP_WSBEiJ_P0087167 Eif4ebp1 protein_coding protein_coding MGP_WSBEiJ_T0087732.1 MGP_WSBEiJ_G0032811.1 mouse_genomes_project 8 69732837 69742025 - MGP_WSBEiJ_P0087732 Ndufa13 protein_coding protein_coding MGP_WSBEiJ_T0005243.1 MGP_WSBEiJ_G0004444.1 mouse_genomes_project 8 606711 607861 - antisense antisense MGP_WSBEiJ_T0010807.1 MGP_WSBEiJ_G0008964.1 mouse_genomes_project 8 85335600 85335709 - Gm24197 miRNA miRNA MGP_WSBEiJ_T0087076.1 MGP_WSBEiJ_G0032610.1 mouse_genomes_project 8 23085907 23101515 - MGP_WSBEiJ_P0087076 Htra4 protein_coding protein_coding MGP_WSBEiJ_T0087077.1 MGP_WSBEiJ_G0032610.1 mouse_genomes_project 8 23090116 23099883 - Htra4 protein_coding retained_intron MGP_WSBEiJ_T0088127.1 MGP_WSBEiJ_G0032931.1 mouse_genomes_project 8 77648160 77662739 - MGP_WSBEiJ_P0088127 Tmem184c protein_coding protein_coding MGP_WSBEiJ_T0088128.1 MGP_WSBEiJ_G0032931.1 mouse_genomes_project 8 77655041 77662784 - MGP_WSBEiJ_P0088128 Tmem184c protein_coding protein_coding MGP_WSBEiJ_T0088129.1 MGP_WSBEiJ_G0032931.1 mouse_genomes_project 8 77658538 77662754 - MGP_WSBEiJ_P0088129 Tmem184c protein_coding protein_coding MGP_WSBEiJ_T0087593.1 MGP_WSBEiJ_G0032768.1 mouse_genomes_project 8 61656460 61721192 - MGP_WSBEiJ_P0087593 Anxa10 protein_coding protein_coding MGP_WSBEiJ_T0087594.1 MGP_WSBEiJ_G0032768.1 mouse_genomes_project 8 61656939 61721198 - MGP_WSBEiJ_P0087594 Anxa10 protein_coding protein_coding MGP_WSBEiJ_T0088877.1 MGP_WSBEiJ_G0033175.1 mouse_genomes_project 8 107074394 107098980 - MGP_WSBEiJ_P0088877 Zdhhc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088503.1 MGP_WSBEiJ_G0033042.1 mouse_genomes_project 8 88153294 88465005 - MGP_WSBEiJ_P0088503 Zfp423 protein_coding protein_coding MGP_WSBEiJ_T0088504.1 MGP_WSBEiJ_G0033042.1 mouse_genomes_project 8 88153297 88397210 - MGP_WSBEiJ_P0088504 Zfp423 protein_coding protein_coding MGP_WSBEiJ_T0088505.1 MGP_WSBEiJ_G0033042.1 mouse_genomes_project 8 88276663 88459095 - MGP_WSBEiJ_P0088505 Zfp423 protein_coding protein_coding MGP_WSBEiJ_T0088506.1 MGP_WSBEiJ_G0033042.1 mouse_genomes_project 8 88276818 88298833 - MGP_WSBEiJ_P0088506 Zfp423 protein_coding protein_coding MGP_WSBEiJ_T0088507.1 MGP_WSBEiJ_G0033042.1 mouse_genomes_project 8 88276987 88449348 - Zfp423 protein_coding processed_transcript MGP_WSBEiJ_T0088508.1 MGP_WSBEiJ_G0033042.1 mouse_genomes_project 8 88277004 88454024 - Zfp423 protein_coding processed_transcript MGP_WSBEiJ_T0088601.1 MGP_WSBEiJ_G0033074.1 mouse_genomes_project 8 94008286 94032799 - MGP_WSBEiJ_P0088601 Ces1f protein_coding protein_coding MGP_WSBEiJ_T0088602.1 MGP_WSBEiJ_G0033074.1 mouse_genomes_project 8 94008638 94010800 - Ces1f protein_coding retained_intron MGP_WSBEiJ_T0088603.1 MGP_WSBEiJ_G0033074.1 mouse_genomes_project 8 94018463 94020331 - Ces1f protein_coding retained_intron MGP_WSBEiJ_T0088604.1 MGP_WSBEiJ_G0033074.1 mouse_genomes_project 8 94018915 94020458 - Ces1f protein_coding retained_intron MGP_WSBEiJ_T0088605.1 MGP_WSBEiJ_G0033074.1 mouse_genomes_project 8 94026989 94028424 - Ces1f protein_coding retained_intron MGP_WSBEiJ_T0088606.1 MGP_WSBEiJ_G0033074.1 mouse_genomes_project 8 94027310 94032779 - MGP_WSBEiJ_P0088606 Ces1f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089266.1 MGP_WSBEiJ_G0033318.1 mouse_genomes_project 8 122237745 122259392 + MGP_WSBEiJ_P0089266 Wfdc1 protein_coding protein_coding MGP_WSBEiJ_T0087614.1 MGP_WSBEiJ_G0032776.1 mouse_genomes_project 8 64725789 64731785 - MGP_WSBEiJ_P0087614 Trim75 protein_coding protein_coding MGP_WSBEiJ_T0008987.1 MGP_WSBEiJ_G0007238.1 mouse_genomes_project 8 87944376 87947728 + Gm19872 lincRNA lincRNA MGP_WSBEiJ_T0089190.1 MGP_WSBEiJ_G0033288.1 mouse_genomes_project 8 116637218 116646217 + MGP_WSBEiJ_P0089190 Clec3a protein_coding protein_coding MGP_WSBEiJ_T0010794.1 MGP_WSBEiJ_G0008951.1 mouse_genomes_project 8 84038700 84038807 - Mir1668 miRNA miRNA MGP_WSBEiJ_T0089200.1 MGP_WSBEiJ_G0033290.1 mouse_genomes_project 8 117988258 118013453 - MGP_WSBEiJ_P0089200 Maf protein_coding protein_coding MGP_WSBEiJ_T0089201.1 MGP_WSBEiJ_G0033290.1 mouse_genomes_project 8 118007788 118014145 - MGP_WSBEiJ_P0089201 Maf protein_coding protein_coding MGP_WSBEiJ_T0088898.1 MGP_WSBEiJ_G0033185.1 mouse_genomes_project 8 107329051 107331005 + MGP_WSBEiJ_P0088898 4933405L10Rik protein_coding protein_coding MGP_WSBEiJ_T0089620.1 MGP_WSBEiJ_G0033416.1 mouse_genomes_project 8 128675203 128690538 + Ntpcr protein_coding processed_transcript MGP_WSBEiJ_T0089621.1 MGP_WSBEiJ_G0033416.1 mouse_genomes_project 8 128675268 128693048 + MGP_WSBEiJ_P0089621 Ntpcr protein_coding protein_coding MGP_WSBEiJ_T0089622.1 MGP_WSBEiJ_G0033416.1 mouse_genomes_project 8 128675272 128683341 + Ntpcr protein_coding processed_transcript MGP_WSBEiJ_T0089623.1 MGP_WSBEiJ_G0033416.1 mouse_genomes_project 8 128678317 128693273 + Ntpcr protein_coding processed_transcript MGP_WSBEiJ_T0089624.1 MGP_WSBEiJ_G0033416.1 mouse_genomes_project 8 128679429 128693475 + MGP_WSBEiJ_P0089624 Ntpcr protein_coding protein_coding MGP_WSBEiJ_T0089625.1 MGP_WSBEiJ_G0033416.1 mouse_genomes_project 8 128679459 128681526 + Ntpcr protein_coding retained_intron MGP_WSBEiJ_T0089626.1 MGP_WSBEiJ_G0033416.1 mouse_genomes_project 8 128679464 128684383 + MGP_WSBEiJ_P0089626 Ntpcr protein_coding protein_coding MGP_WSBEiJ_T0089627.1 MGP_WSBEiJ_G0033416.1 mouse_genomes_project 8 128681031 128693236 + MGP_WSBEiJ_P0089627 Ntpcr protein_coding protein_coding MGP_WSBEiJ_T0009055.1 MGP_WSBEiJ_G0007282.1 mouse_genomes_project 8 126590383 126601563 - 4732419C18Rik lincRNA lincRNA MGP_WSBEiJ_T0088691.1 MGP_WSBEiJ_G0033101.1 mouse_genomes_project 8 95766746 95775101 + MGP_WSBEiJ_P0088691 Polr2c protein_coding protein_coding MGP_WSBEiJ_T0088692.1 MGP_WSBEiJ_G0033101.1 mouse_genomes_project 8 95766852 95774336 + MGP_WSBEiJ_P0088692 Polr2c protein_coding unknown_likely_coding MGP_WSBEiJ_T0087465.1 MGP_WSBEiJ_G0032732.1 mouse_genomes_project 8 46937892 46938665 + MGP_WSBEiJ_P0087465 Cldn24 protein_coding protein_coding MGP_WSBEiJ_T0087635.1 MGP_WSBEiJ_G0032782.1 mouse_genomes_project 8 66290843 66292864 + MGP_WSBEiJ_P0087635 Tktl2 protein_coding protein_coding MGP_WSBEiJ_T0087636.1 MGP_WSBEiJ_G0032782.1 mouse_genomes_project 8 66290846 66297417 + MGP_WSBEiJ_P0087636 Tktl2 protein_coding protein_coding MGP_WSBEiJ_T0089288.1 MGP_WSBEiJ_G0033325.1 mouse_genomes_project 8 122685732 122709223 - MGP_WSBEiJ_P0089288 Zdhhc7 protein_coding protein_coding MGP_WSBEiJ_T0089289.1 MGP_WSBEiJ_G0033325.1 mouse_genomes_project 8 122687039 122693596 - Zdhhc7 protein_coding retained_intron MGP_WSBEiJ_T0089290.1 MGP_WSBEiJ_G0033325.1 mouse_genomes_project 8 122691998 122694836 - Zdhhc7 protein_coding retained_intron MGP_WSBEiJ_T0089291.1 MGP_WSBEiJ_G0033325.1 mouse_genomes_project 8 122692188 122695029 - Zdhhc7 protein_coding retained_intron MGP_WSBEiJ_T0089292.1 MGP_WSBEiJ_G0033325.1 mouse_genomes_project 8 122700635 122708813 - Zdhhc7 protein_coding processed_transcript MGP_WSBEiJ_T0087527.1 MGP_WSBEiJ_G0032755.1 mouse_genomes_project 8 56954890 57023046 - MGP_WSBEiJ_P0087527 Galnt7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087528.1 MGP_WSBEiJ_G0032755.1 mouse_genomes_project 8 56954895 57094450 - MGP_WSBEiJ_P0087528 Galnt7 protein_coding protein_coding MGP_WSBEiJ_T0087529.1 MGP_WSBEiJ_G0032755.1 mouse_genomes_project 8 56955767 57094495 - MGP_WSBEiJ_P0087529 Galnt7 protein_coding protein_coding MGP_WSBEiJ_T0087530.1 MGP_WSBEiJ_G0032755.1 mouse_genomes_project 8 56957092 56972755 - Galnt7 protein_coding processed_transcript MGP_WSBEiJ_T0087531.1 MGP_WSBEiJ_G0032755.1 mouse_genomes_project 8 56976298 57094495 - Galnt7 protein_coding retained_intron MGP_WSBEiJ_T0098552.1 MGP_WSBEiJ_G0037215.1 mouse_genomes_project 8 79134625 79134732 - Gm22044 snRNA snRNA MGP_WSBEiJ_T0086803.1 MGP_WSBEiJ_G0032501.1 mouse_genomes_project 8 10346883 10370210 + MGP_WSBEiJ_P0086803 F10 protein_coding protein_coding MGP_WSBEiJ_T0086804.1 MGP_WSBEiJ_G0032501.1 mouse_genomes_project 8 10347117 10365622 + MGP_WSBEiJ_P0086804 F10 protein_coding protein_coding MGP_WSBEiJ_T0086805.1 MGP_WSBEiJ_G0032501.1 mouse_genomes_project 8 10347382 10355889 + MGP_WSBEiJ_P0086805 F10 protein_coding protein_coding MGP_WSBEiJ_T0088060.1 MGP_WSBEiJ_G0032906.1 mouse_genomes_project 8 72196677 72200756 + MGP_WSBEiJ_P0088060 Fam32a protein_coding protein_coding MGP_WSBEiJ_T0088007.1 MGP_WSBEiJ_G0032890.1 mouse_genomes_project 8 71604506 71620835 + MGP_WSBEiJ_P0088007 Jak3 protein_coding protein_coding MGP_WSBEiJ_T0088008.1 MGP_WSBEiJ_G0032890.1 mouse_genomes_project 8 71604506 71618815 + MGP_WSBEiJ_P0088008 Jak3 protein_coding protein_coding MGP_WSBEiJ_T0088009.1 MGP_WSBEiJ_G0032890.1 mouse_genomes_project 8 71604752 71610580 + Jak3 protein_coding retained_intron MGP_WSBEiJ_T0088010.1 MGP_WSBEiJ_G0032890.1 mouse_genomes_project 8 71605749 71618817 + MGP_WSBEiJ_P0088010 Jak3 protein_coding protein_coding MGP_WSBEiJ_T0088011.1 MGP_WSBEiJ_G0032890.1 mouse_genomes_project 8 71606533 71620484 + Jak3 protein_coding retained_intron MGP_WSBEiJ_T0087273.1 MGP_WSBEiJ_G0032682.1 mouse_genomes_project 8 39117351 39201439 + MGP_WSBEiJ_P0087273 Micu3 protein_coding protein_coding MGP_WSBEiJ_T0087274.1 MGP_WSBEiJ_G0032682.1 mouse_genomes_project 8 39118051 39198956 + MGP_WSBEiJ_P0087274 Micu3 protein_coding protein_coding MGP_WSBEiJ_T0087275.1 MGP_WSBEiJ_G0032682.1 mouse_genomes_project 8 39178406 39192351 + Micu3 protein_coding retained_intron MGP_WSBEiJ_T0087122.1 MGP_WSBEiJ_G0032618.1 mouse_genomes_project 8 23871728 23887343 + MGP_WSBEiJ_P0087122 protein_coding protein_coding MGP_WSBEiJ_T0088457.1 MGP_WSBEiJ_G0033028.1 mouse_genomes_project 8 85708710 85717351 + MGP_WSBEiJ_P0088457 Orc6 protein_coding protein_coding MGP_WSBEiJ_T0088458.1 MGP_WSBEiJ_G0033028.1 mouse_genomes_project 8 85708710 85717351 + MGP_WSBEiJ_P0088458 Orc6 protein_coding protein_coding MGP_WSBEiJ_T0089584.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127556659 127607769 - MGP_WSBEiJ_P0089584 Ttc13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089585.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127556669 127607790 - MGP_WSBEiJ_P0089585 Ttc13 protein_coding protein_coding MGP_WSBEiJ_T0089586.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127556669 127607771 - MGP_WSBEiJ_P0089586 Ttc13 protein_coding protein_coding MGP_WSBEiJ_T0089587.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127556669 127607779 - MGP_WSBEiJ_P0089587 Ttc13 protein_coding protein_coding MGP_WSBEiJ_T0089588.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127558782 127559555 - Ttc13 protein_coding retained_intron MGP_WSBEiJ_T0089589.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127559288 127560837 - Ttc13 protein_coding retained_intron MGP_WSBEiJ_T0089590.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127559434 127564287 - Ttc13 protein_coding retained_intron MGP_WSBEiJ_T0089591.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127564373 127567869 - Ttc13 protein_coding retained_intron MGP_WSBEiJ_T0089592.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127564879 127567461 - Ttc13 protein_coding retained_intron MGP_WSBEiJ_T0089593.1 MGP_WSBEiJ_G0033403.1 mouse_genomes_project 8 127594142 127607788 - Ttc13 protein_coding retained_intron MGP_WSBEiJ_T0010834.1 MGP_WSBEiJ_G0008991.1 mouse_genomes_project 8 119886531 119886595 + Mir7078 miRNA miRNA MGP_WSBEiJ_T0010796.1 MGP_WSBEiJ_G0008953.1 mouse_genomes_project 8 84261618 84261761 - Gm44330 miRNA miRNA MGP_WSBEiJ_T0017851.1 MGP_WSBEiJ_G0015130.1 mouse_genomes_project 8 23655423 23662843 - Gm16159 processed_transcript processed_transcript MGP_WSBEiJ_T0017852.1 MGP_WSBEiJ_G0015130.1 mouse_genomes_project 8 23659442 23660323 - Gm16159 processed_transcript processed_transcript MGP_WSBEiJ_T0098527.1 MGP_WSBEiJ_G0037190.1 mouse_genomes_project 8 10612040 10612143 - Gm25014 snRNA snRNA MGP_WSBEiJ_T0099812.1 MGP_WSBEiJ_G0038475.1 mouse_genomes_project 8 112780476 112780565 - Snord111 snoRNA snoRNA MGP_WSBEiJ_T0088779.1 MGP_WSBEiJ_G0033139.1 mouse_genomes_project 8 105960173 106027829 - MGP_WSBEiJ_P0088779 Terb1 protein_coding protein_coding MGP_WSBEiJ_T0088780.1 MGP_WSBEiJ_G0033139.1 mouse_genomes_project 8 105960492 106027825 - MGP_WSBEiJ_P0088780 Terb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088781.1 MGP_WSBEiJ_G0033139.1 mouse_genomes_project 8 105960493 106027824 - MGP_WSBEiJ_P0088781 Terb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088782.1 MGP_WSBEiJ_G0033139.1 mouse_genomes_project 8 105961224 106027852 - MGP_WSBEiJ_P0088782 Terb1 protein_coding protein_coding MGP_WSBEiJ_T0011517.1 MGP_WSBEiJ_G0009674.1 mouse_genomes_project 8 30006948 30007049 - Gm24184 misc_RNA misc_RNA MGP_WSBEiJ_T0088904.1 MGP_WSBEiJ_G0033189.1 mouse_genomes_project 8 107490789 107499411 - MGP_WSBEiJ_P0088904 Cenpt protein_coding protein_coding MGP_WSBEiJ_T0089293.1 MGP_WSBEiJ_G0033326.1 mouse_genomes_project 8 122724257 122779587 + MGP_WSBEiJ_P0089293 6430548M08Rik protein_coding protein_coding MGP_WSBEiJ_T0089294.1 MGP_WSBEiJ_G0033326.1 mouse_genomes_project 8 122724257 122768907 + MGP_WSBEiJ_P0089294 6430548M08Rik protein_coding protein_coding MGP_WSBEiJ_T0089295.1 MGP_WSBEiJ_G0033326.1 mouse_genomes_project 8 122724258 122779585 + MGP_WSBEiJ_P0089295 6430548M08Rik protein_coding protein_coding MGP_WSBEiJ_T0089296.1 MGP_WSBEiJ_G0033326.1 mouse_genomes_project 8 122758086 122759142 + MGP_WSBEiJ_P0089296 6430548M08Rik protein_coding protein_coding MGP_WSBEiJ_T0089297.1 MGP_WSBEiJ_G0033326.1 mouse_genomes_project 8 122758327 122766874 + MGP_WSBEiJ_P0089297 6430548M08Rik protein_coding protein_coding MGP_WSBEiJ_T0089298.1 MGP_WSBEiJ_G0033326.1 mouse_genomes_project 8 122758552 122777159 + MGP_WSBEiJ_P0089298 6430548M08Rik protein_coding protein_coding MGP_WSBEiJ_T0089299.1 MGP_WSBEiJ_G0033326.1 mouse_genomes_project 8 122770116 122775657 + 6430548M08Rik protein_coding processed_transcript MGP_WSBEiJ_T0010782.1 MGP_WSBEiJ_G0008939.1 mouse_genomes_project 8 55963283 55963392 + Gm25992 miRNA miRNA MGP_WSBEiJ_T0087164.1 MGP_WSBEiJ_G0032637.1 mouse_genomes_project 8 25429975 25433802 - MGP_WSBEiJ_P0087164 Adrb3 protein_coding protein_coding MGP_WSBEiJ_T0087165.1 MGP_WSBEiJ_G0032637.1 mouse_genomes_project 8 25430205 25432797 - MGP_WSBEiJ_P0087165 Adrb3 protein_coding protein_coding MGP_WSBEiJ_T0087166.1 MGP_WSBEiJ_G0032637.1 mouse_genomes_project 8 25431003 25432708 - MGP_WSBEiJ_P0087166 Adrb3 protein_coding protein_coding MGP_WSBEiJ_T0088590.1 MGP_WSBEiJ_G0033070.1 mouse_genomes_project 8 93786248 93858326 - MGP_WSBEiJ_P0088590 Ces1b protein_coding protein_coding MGP_WSBEiJ_T0088416.1 MGP_WSBEiJ_G0033015.1 mouse_genomes_project 8 85421810 85429322 - MGP_WSBEiJ_P0088416 Best2 protein_coding protein_coding MGP_WSBEiJ_T0088059.1 MGP_WSBEiJ_G0032905.1 mouse_genomes_project 8 72190677 72190835 - MGP_WSBEiJ_P0088059 Gm11034 protein_coding protein_coding MGP_WSBEiJ_T0089156.1 MGP_WSBEiJ_G0033273.1 mouse_genomes_project 8 113742722 113767776 - MGP_WSBEiJ_P0089156 Bcar1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089157.1 MGP_WSBEiJ_G0033273.1 mouse_genomes_project 8 113742739 113779564 - MGP_WSBEiJ_P0089157 Bcar1 protein_coding protein_coding MGP_WSBEiJ_T0088810.1 MGP_WSBEiJ_G0033150.1 mouse_genomes_project 8 106505089 106514793 + MGP_WSBEiJ_P0088810 Ces2f protein_coding protein_coding MGP_WSBEiJ_T0087138.1 MGP_WSBEiJ_G0032627.1 mouse_genomes_project 8 24148587 24254251 - MGP_WSBEiJ_P0087138 Hook3 protein_coding protein_coding MGP_WSBEiJ_T0087139.1 MGP_WSBEiJ_G0032627.1 mouse_genomes_project 8 24165242 24203397 - MGP_WSBEiJ_P0087139 Hook3 protein_coding protein_coding MGP_WSBEiJ_T0087140.1 MGP_WSBEiJ_G0032627.1 mouse_genomes_project 8 24165251 24174920 - Hook3 protein_coding retained_intron MGP_WSBEiJ_T0086760.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9906330 9970862 - MGP_WSBEiJ_P0086760 Tubgcp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086761.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9906330 9971011 - MGP_WSBEiJ_P0086761 Tubgcp3 protein_coding protein_coding MGP_WSBEiJ_T0086762.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9906332 9932457 - Tubgcp3 protein_coding retained_intron MGP_WSBEiJ_T0086763.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9907228 9932430 - Tubgcp3 protein_coding retained_intron MGP_WSBEiJ_T0086764.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9916327 9955813 - Tubgcp3 protein_coding retained_intron MGP_WSBEiJ_T0086765.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9924970 9970886 - Tubgcp3 protein_coding retained_intron MGP_WSBEiJ_T0086766.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9944390 9954083 - Tubgcp3 protein_coding retained_intron MGP_WSBEiJ_T0086767.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9950681 9955827 - MGP_WSBEiJ_P0086767 Tubgcp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086768.1 MGP_WSBEiJ_G0032497.1 mouse_genomes_project 8 9950716 9970722 - MGP_WSBEiJ_P0086768 Tubgcp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098549.1 MGP_WSBEiJ_G0037212.1 mouse_genomes_project 8 77229718 77229890 + Gm23260 snRNA snRNA MGP_WSBEiJ_T0087462.1 MGP_WSBEiJ_G0032729.1 mouse_genomes_project 8 46777046 46778709 + MGP_WSBEiJ_P0087462 protein_coding protein_coding MGP_WSBEiJ_T0009045.1 MGP_WSBEiJ_G0007275.1 mouse_genomes_project 8 124164752 124165155 + Gm26784 lincRNA lincRNA MGP_WSBEiJ_T0088684.1 MGP_WSBEiJ_G0033100.1 mouse_genomes_project 8 95746151 95762462 + MGP_WSBEiJ_P0088684 Coq9 protein_coding protein_coding MGP_WSBEiJ_T0088685.1 MGP_WSBEiJ_G0033100.1 mouse_genomes_project 8 95746235 95758349 + Coq9 protein_coding retained_intron MGP_WSBEiJ_T0088686.1 MGP_WSBEiJ_G0033100.1 mouse_genomes_project 8 95746245 95750580 + Coq9 protein_coding retained_intron MGP_WSBEiJ_T0088687.1 MGP_WSBEiJ_G0033100.1 mouse_genomes_project 8 95746259 95760762 + Coq9 protein_coding retained_intron MGP_WSBEiJ_T0088688.1 MGP_WSBEiJ_G0033100.1 mouse_genomes_project 8 95746259 95760837 + MGP_WSBEiJ_P0088688 Coq9 protein_coding protein_coding MGP_WSBEiJ_T0088689.1 MGP_WSBEiJ_G0033100.1 mouse_genomes_project 8 95757755 95758549 + Coq9 protein_coding retained_intron MGP_WSBEiJ_T0088690.1 MGP_WSBEiJ_G0033100.1 mouse_genomes_project 8 95761081 95761904 + Coq9 protein_coding retained_intron MGP_WSBEiJ_T0015497.1 MGP_WSBEiJ_G0013627.1 mouse_genomes_project 8 119523127 119523531 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087347.1 MGP_WSBEiJ_G0032703.1 mouse_genomes_project 8 44261720 44288231 - MGP_WSBEiJ_P0087347 protein_coding protein_coding MGP_WSBEiJ_T0088694.1 MGP_WSBEiJ_G0033103.1 mouse_genomes_project 8 95813707 95830735 - MGP_WSBEiJ_P0088694 Ccdc102a protein_coding protein_coding MGP_WSBEiJ_T0088695.1 MGP_WSBEiJ_G0033103.1 mouse_genomes_project 8 95826201 95830158 - MGP_WSBEiJ_P0088695 Ccdc102a protein_coding protein_coding MGP_WSBEiJ_T0089558.1 MGP_WSBEiJ_G0033393.1 mouse_genomes_project 8 126753838 126806424 - MGP_WSBEiJ_P0089558 Nup133 protein_coding protein_coding MGP_WSBEiJ_T0096849.1 MGP_WSBEiJ_G0035530.1 mouse_genomes_project 8 7025187 7025539 - pseudogene pseudogene MGP_WSBEiJ_T0010833.1 MGP_WSBEiJ_G0008990.1 mouse_genomes_project 8 119880308 119880365 + Mir7077 miRNA miRNA MGP_WSBEiJ_T0086881.1 MGP_WSBEiJ_G0032528.1 mouse_genomes_project 8 12142042 12144145 - MGP_WSBEiJ_P0086881 protein_coding protein_coding MGP_WSBEiJ_T0088874.1 MGP_WSBEiJ_G0033174.1 mouse_genomes_project 8 107069448 107073504 - MGP_WSBEiJ_P0088874 Tppp3 protein_coding protein_coding MGP_WSBEiJ_T0088875.1 MGP_WSBEiJ_G0033174.1 mouse_genomes_project 8 107069623 107071365 - MGP_WSBEiJ_P0088875 Tppp3 protein_coding protein_coding MGP_WSBEiJ_T0088876.1 MGP_WSBEiJ_G0033174.1 mouse_genomes_project 8 107069637 107070615 - MGP_WSBEiJ_P0088876 Tppp3 protein_coding protein_coding MGP_WSBEiJ_T0015466.1 MGP_WSBEiJ_G0013596.1 mouse_genomes_project 8 65543914 65544199 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010813.1 MGP_WSBEiJ_G0008970.1 mouse_genomes_project 8 89621711 89622770 + miRNA miRNA MGP_WSBEiJ_T0087293.1 MGP_WSBEiJ_G0032685.1 mouse_genomes_project 8 39332241 39372001 + MGP_WSBEiJ_P0087293 Vps37a protein_coding protein_coding MGP_WSBEiJ_T0015465.1 MGP_WSBEiJ_G0013595.1 mouse_genomes_project 8 63456259 63457257 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087049.1 MGP_WSBEiJ_G0032604.1 mouse_genomes_project 8 22670342 22738108 - MGP_WSBEiJ_P0087049 Adam18 protein_coding protein_coding MGP_WSBEiJ_T0087050.1 MGP_WSBEiJ_G0032604.1 mouse_genomes_project 8 22670342 22738108 - MGP_WSBEiJ_P0087050 Adam18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087051.1 MGP_WSBEiJ_G0032604.1 mouse_genomes_project 8 22670346 22694492 - Adam18 protein_coding processed_transcript MGP_WSBEiJ_T0005252.1 MGP_WSBEiJ_G0004451.1 mouse_genomes_project 8 10203082 10223332 - Gm15351 antisense antisense MGP_WSBEiJ_T0005253.1 MGP_WSBEiJ_G0004451.1 mouse_genomes_project 8 10220231 10223471 - Gm15351 antisense antisense MGP_WSBEiJ_T0005254.1 MGP_WSBEiJ_G0004451.1 mouse_genomes_project 8 10222296 10223186 - Gm15351 antisense antisense MGP_WSBEiJ_T0089436.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125265979 125337521 - MGP_WSBEiJ_P0089436 Piezo1 protein_coding protein_coding MGP_WSBEiJ_T0089437.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125265993 125284187 - MGP_WSBEiJ_P0089437 Piezo1 protein_coding protein_coding MGP_WSBEiJ_T0089438.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125265994 125337230 - MGP_WSBEiJ_P0089438 Piezo1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089439.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125266002 125269062 - Piezo1 protein_coding retained_intron MGP_WSBEiJ_T0089440.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125266263 125284186 - MGP_WSBEiJ_P0089440 Piezo1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089441.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125266322 125267282 - Piezo1 protein_coding retained_intron MGP_WSBEiJ_T0089442.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125266361 125266958 - Piezo1 protein_coding retained_intron MGP_WSBEiJ_T0089443.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125267648 125268151 - Piezo1 protein_coding retained_intron MGP_WSBEiJ_T0089444.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125269146 125269906 - Piezo1 protein_coding retained_intron MGP_WSBEiJ_T0089445.1 MGP_WSBEiJ_G0033357.1 mouse_genomes_project 8 125270205 125282504 - MGP_WSBEiJ_P0089445 Piezo1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087418.1 MGP_WSBEiJ_G0032717.1 mouse_genomes_project 8 45336054 45338704 - MGP_WSBEiJ_P0087418 Helt protein_coding protein_coding MGP_WSBEiJ_T0089229.1 MGP_WSBEiJ_G0033304.1 mouse_genomes_project 8 120150628 120216301 + MGP_WSBEiJ_P0089229 Hsd17b2 protein_coding protein_coding MGP_WSBEiJ_T0087334.1 MGP_WSBEiJ_G0032697.1 mouse_genomes_project 8 42201900 42215263 - MGP_WSBEiJ_P0087334 Zfp42 protein_coding protein_coding MGP_WSBEiJ_T0008936.1 MGP_WSBEiJ_G0007194.1 mouse_genomes_project 8 30357188 30365033 + Gm26578 lincRNA lincRNA MGP_WSBEiJ_T0086993.1 MGP_WSBEiJ_G0032587.1 mouse_genomes_project 8 20574140 20578421 + MGP_WSBEiJ_P0086993 Dkk4 protein_coding protein_coding MGP_WSBEiJ_T0009010.1 MGP_WSBEiJ_G0007249.1 mouse_genomes_project 8 93043585 93046379 - Gm21817 lincRNA lincRNA MGP_WSBEiJ_T0087032.1 MGP_WSBEiJ_G0032595.1 mouse_genomes_project 8 21154861 21192652 - MGP_WSBEiJ_P0087032 Gpat4 protein_coding protein_coding MGP_WSBEiJ_T0088774.1 MGP_WSBEiJ_G0033134.1 mouse_genomes_project 8 105785123 105808483 - MGP_WSBEiJ_P0088774 protein_coding protein_coding MGP_WSBEiJ_T0088286.1 MGP_WSBEiJ_G0032988.1 mouse_genomes_project 8 84559105 84588372 - MGP_WSBEiJ_P0088286 Zswim4 protein_coding protein_coding MGP_WSBEiJ_T0089671.1 MGP_WSBEiJ_G0033429.1 mouse_genomes_project 8 131792265 131851490 + MGP_WSBEiJ_P0089671 Itgb1 protein_coding protein_coding MGP_WSBEiJ_T0089672.1 MGP_WSBEiJ_G0033429.1 mouse_genomes_project 8 131792368 131850907 + MGP_WSBEiJ_P0089672 Itgb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089673.1 MGP_WSBEiJ_G0033429.1 mouse_genomes_project 8 131792481 131828443 + Itgb1 protein_coding retained_intron MGP_WSBEiJ_T0089674.1 MGP_WSBEiJ_G0033429.1 mouse_genomes_project 8 131842622 131850679 + MGP_WSBEiJ_P0089674 Itgb1 protein_coding protein_coding MGP_WSBEiJ_T0088919.1 MGP_WSBEiJ_G0033197.1 mouse_genomes_project 8 107591797 107595627 - MGP_WSBEiJ_P0088919 Lcat protein_coding protein_coding MGP_WSBEiJ_T0098550.1 MGP_WSBEiJ_G0037213.1 mouse_genomes_project 8 77621289 77621397 - Gm23468 snRNA snRNA MGP_WSBEiJ_T0098551.1 MGP_WSBEiJ_G0037214.1 mouse_genomes_project 8 77876288 77876394 + Gm23981 snRNA snRNA MGP_WSBEiJ_T0011519.1 MGP_WSBEiJ_G0009676.1 mouse_genomes_project 8 64665377 64665468 + Gm26210 misc_RNA misc_RNA MGP_WSBEiJ_T0005293.1 MGP_WSBEiJ_G0004483.1 mouse_genomes_project 8 80695914 80698546 - 4930505O20Rik antisense antisense MGP_WSBEiJ_T0099801.1 MGP_WSBEiJ_G0038464.1 mouse_genomes_project 8 86676622 86676746 + Gm23904 snoRNA snoRNA MGP_WSBEiJ_T0089405.1 MGP_WSBEiJ_G0033348.1 mouse_genomes_project 8 125056418 125112053 + MGP_WSBEiJ_P0089405 Zfpm1 protein_coding protein_coding MGP_WSBEiJ_T0089406.1 MGP_WSBEiJ_G0033348.1 mouse_genomes_project 8 125082404 125098858 + Zfpm1 protein_coding processed_transcript MGP_WSBEiJ_T0089407.1 MGP_WSBEiJ_G0033348.1 mouse_genomes_project 8 125108497 125109831 + Zfpm1 protein_coding processed_transcript MGP_WSBEiJ_T0089408.1 MGP_WSBEiJ_G0033348.1 mouse_genomes_project 8 125108585 125110563 + MGP_WSBEiJ_P0089408 Zfpm1 protein_coding protein_coding MGP_WSBEiJ_T0011526.1 MGP_WSBEiJ_G0009683.1 mouse_genomes_project 8 106787120 106787209 + Gm24629 misc_RNA misc_RNA MGP_WSBEiJ_T0089410.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125153685 125197571 + MGP_WSBEiJ_P0089410 Zc3h18 protein_coding protein_coding MGP_WSBEiJ_T0089411.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125153720 125162601 + MGP_WSBEiJ_P0089411 Zc3h18 protein_coding protein_coding MGP_WSBEiJ_T0089412.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125153724 125170066 + Zc3h18 protein_coding retained_intron MGP_WSBEiJ_T0089413.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125153757 125197571 + MGP_WSBEiJ_P0089413 Zc3h18 protein_coding protein_coding MGP_WSBEiJ_T0089414.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125154072 125197579 + MGP_WSBEiJ_P0089414 Zc3h18 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089415.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125183493 125186339 + Zc3h18 protein_coding processed_transcript MGP_WSBEiJ_T0089416.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125183563 125191615 + MGP_WSBEiJ_P0089416 Zc3h18 protein_coding protein_coding MGP_WSBEiJ_T0089417.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125188054 125197571 + Zc3h18 protein_coding retained_intron MGP_WSBEiJ_T0089418.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125188229 125191116 + Zc3h18 protein_coding retained_intron MGP_WSBEiJ_T0089419.1 MGP_WSBEiJ_G0033350.1 mouse_genomes_project 8 125191536 125196460 + MGP_WSBEiJ_P0089419 Zc3h18 protein_coding protein_coding MGP_WSBEiJ_T0088833.1 MGP_WSBEiJ_G0033159.1 mouse_genomes_project 8 106847361 106853669 - MGP_WSBEiJ_P0088833 Tradd protein_coding protein_coding MGP_WSBEiJ_T0088834.1 MGP_WSBEiJ_G0033159.1 mouse_genomes_project 8 106848265 106849196 - Tradd protein_coding retained_intron MGP_WSBEiJ_T0088835.1 MGP_WSBEiJ_G0033159.1 mouse_genomes_project 8 106848358 106853641 - MGP_WSBEiJ_P0088835 Tradd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088836.1 MGP_WSBEiJ_G0033159.1 mouse_genomes_project 8 106848832 106853663 - MGP_WSBEiJ_P0088836 Tradd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0008967.1 MGP_WSBEiJ_G0007220.1 mouse_genomes_project 8 77676173 77682302 + 1700092C02Rik lincRNA lincRNA MGP_WSBEiJ_T0009015.1 MGP_WSBEiJ_G0007252.1 mouse_genomes_project 8 95266458 95268172 + Gm15889 lincRNA lincRNA MGP_WSBEiJ_T0089254.1 MGP_WSBEiJ_G0033312.1 mouse_genomes_project 8 122068168 122121610 - MGP_WSBEiJ_P0089254 Mbtps1 protein_coding protein_coding MGP_WSBEiJ_T0089255.1 MGP_WSBEiJ_G0033312.1 mouse_genomes_project 8 122068168 122121610 - MGP_WSBEiJ_P0089255 Mbtps1 protein_coding protein_coding MGP_WSBEiJ_T0089550.1 MGP_WSBEiJ_G0033387.1 mouse_genomes_project 8 126354226 126372079 + MGP_WSBEiJ_P0089550 Gas8 protein_coding protein_coding MGP_WSBEiJ_T0087394.1 MGP_WSBEiJ_G0032712.1 mouse_genomes_project 8 45025363 45028317 - MGP_WSBEiJ_P0087394 Ankrd37 protein_coding protein_coding MGP_WSBEiJ_T0087395.1 MGP_WSBEiJ_G0032712.1 mouse_genomes_project 8 45025372 45028317 - Ankrd37 protein_coding processed_transcript MGP_WSBEiJ_T0087396.1 MGP_WSBEiJ_G0032712.1 mouse_genomes_project 8 45025375 45028016 - Ankrd37 protein_coding retained_intron MGP_WSBEiJ_T0087397.1 MGP_WSBEiJ_G0032712.1 mouse_genomes_project 8 45025426 45026332 - Ankrd37 protein_coding processed_transcript MGP_WSBEiJ_T0087398.1 MGP_WSBEiJ_G0032712.1 mouse_genomes_project 8 45026581 45028299 - Ankrd37 protein_coding retained_intron MGP_WSBEiJ_T0087524.1 MGP_WSBEiJ_G0032752.1 mouse_genomes_project 8 56882652 56905999 + MGP_WSBEiJ_P0087524 Scrg1 protein_coding protein_coding MGP_WSBEiJ_T0011531.1 MGP_WSBEiJ_G0009688.1 mouse_genomes_project 8 126358691 126358972 + Gm22314 misc_RNA misc_RNA MGP_WSBEiJ_T0008995.1 MGP_WSBEiJ_G0007240.1 mouse_genomes_project 8 87963062 87980698 - Gm27016 lincRNA lincRNA MGP_WSBEiJ_T0015431.1 MGP_WSBEiJ_G0013561.1 mouse_genomes_project 8 984882 1001023 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088742.1 MGP_WSBEiJ_G0033121.1 mouse_genomes_project 8 96650063 96650930 + Setd6 protein_coding processed_transcript MGP_WSBEiJ_T0088743.1 MGP_WSBEiJ_G0033121.1 mouse_genomes_project 8 96650080 96653138 + MGP_WSBEiJ_P0088743 Setd6 protein_coding protein_coding MGP_WSBEiJ_T0088744.1 MGP_WSBEiJ_G0033121.1 mouse_genomes_project 8 96650310 96651386 + Setd6 protein_coding processed_transcript MGP_WSBEiJ_T0088745.1 MGP_WSBEiJ_G0033121.1 mouse_genomes_project 8 96650759 96652647 + Setd6 protein_coding processed_transcript MGP_WSBEiJ_T0088746.1 MGP_WSBEiJ_G0033121.1 mouse_genomes_project 8 96650768 96652194 + Setd6 protein_coding processed_transcript MGP_WSBEiJ_T0088747.1 MGP_WSBEiJ_G0033121.1 mouse_genomes_project 8 96651157 96652999 + Setd6 protein_coding processed_transcript MGP_WSBEiJ_T0089634.1 MGP_WSBEiJ_G0033418.1 mouse_genomes_project 8 128863619 128900634 + MGP_WSBEiJ_P0089634 BC021891 protein_coding protein_coding MGP_WSBEiJ_T0097467.1 MGP_WSBEiJ_G0036136.1 mouse_genomes_project 8 32326427 32327398 - Gm26978 sense_intronic sense_intronic MGP_WSBEiJ_T0088773.1 MGP_WSBEiJ_G0033133.1 mouse_genomes_project 8 105771843 105785379 - MGP_WSBEiJ_P0088773 Cmtm2a protein_coding protein_coding MGP_WSBEiJ_T0005311.1 MGP_WSBEiJ_G0004498.1 mouse_genomes_project 8 114671647 114688453 - Gm26994 antisense antisense MGP_WSBEiJ_T0086960.1 MGP_WSBEiJ_G0032570.1 mouse_genomes_project 8 19838124 19841037 - MGP_WSBEiJ_P0086960 Defb15 protein_coding protein_coding MGP_WSBEiJ_T0010821.1 MGP_WSBEiJ_G0008978.1 mouse_genomes_project 8 107231690 107231798 + Mir1966 miRNA miRNA MGP_WSBEiJ_T0086634.1 MGP_WSBEiJ_G0032454.1 mouse_genomes_project 8 841364 850568 - MGP_WSBEiJ_P0086634 Cd209b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086635.1 MGP_WSBEiJ_G0032454.1 mouse_genomes_project 8 841366 850557 - MGP_WSBEiJ_P0086635 Cd209b protein_coding protein_coding MGP_WSBEiJ_T0086636.1 MGP_WSBEiJ_G0032454.1 mouse_genomes_project 8 842315 850557 - MGP_WSBEiJ_P0086636 Cd209b protein_coding protein_coding MGP_WSBEiJ_T0086637.1 MGP_WSBEiJ_G0032454.1 mouse_genomes_project 8 842386 850537 - MGP_WSBEiJ_P0086637 Cd209b protein_coding protein_coding MGP_WSBEiJ_T0088270.1 MGP_WSBEiJ_G0032979.1 mouse_genomes_project 8 84386360 84388432 - MGP_WSBEiJ_P0088270 Rln3 protein_coding protein_coding MGP_WSBEiJ_T0086738.1 MGP_WSBEiJ_G0032488.1 mouse_genomes_project 8 8785856 8794825 + MGP_WSBEiJ_P0086738 Ing1 protein_coding protein_coding MGP_WSBEiJ_T0087508.1 MGP_WSBEiJ_G0032745.1 mouse_genomes_project 8 54348199 54472454 + MGP_WSBEiJ_P0087508 Gpm6a protein_coding protein_coding MGP_WSBEiJ_T0088278.1 MGP_WSBEiJ_G0032985.1 mouse_genomes_project 8 84477605 84492521 - MGP_WSBEiJ_P0088278 Cc2d1a protein_coding protein_coding MGP_WSBEiJ_T0088279.1 MGP_WSBEiJ_G0032985.1 mouse_genomes_project 8 84477605 84492592 - MGP_WSBEiJ_P0088279 Cc2d1a protein_coding protein_coding MGP_WSBEiJ_T0088280.1 MGP_WSBEiJ_G0032985.1 mouse_genomes_project 8 84477614 84481514 - Cc2d1a protein_coding retained_intron MGP_WSBEiJ_T0088281.1 MGP_WSBEiJ_G0032985.1 mouse_genomes_project 8 84491110 84492553 - Cc2d1a protein_coding processed_transcript MGP_WSBEiJ_T0088728.1 MGP_WSBEiJ_G0033115.1 mouse_genomes_project 8 96336176 96350417 - MGP_WSBEiJ_P0088728 Cfap20 protein_coding protein_coding MGP_WSBEiJ_T0089264.1 MGP_WSBEiJ_G0033317.1 mouse_genomes_project 8 122190479 122201894 - MGP_WSBEiJ_P0089264 Kcng4 protein_coding protein_coding MGP_WSBEiJ_T0089265.1 MGP_WSBEiJ_G0033317.1 mouse_genomes_project 8 122190479 122202225 - MGP_WSBEiJ_P0089265 Kcng4 protein_coding protein_coding MGP_WSBEiJ_T0087255.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35233681 35412950 - MGP_WSBEiJ_P0087255 Dlc1 protein_coding protein_coding MGP_WSBEiJ_T0087256.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35233681 35281736 - MGP_WSBEiJ_P0087256 Dlc1 protein_coding protein_coding MGP_WSBEiJ_T0087257.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35236167 35645181 - MGP_WSBEiJ_P0087257 Dlc1 protein_coding protein_coding MGP_WSBEiJ_T0087258.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35238121 35243068 - Dlc1 protein_coding retained_intron MGP_WSBEiJ_T0087259.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35258790 35281667 - Dlc1 protein_coding retained_intron MGP_WSBEiJ_T0087260.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35531504 35645096 - Dlc1 protein_coding retained_intron MGP_WSBEiJ_T0087261.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35544245 35645161 - Dlc1 protein_coding retained_intron MGP_WSBEiJ_T0087262.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35627664 35645175 - Dlc1 protein_coding retained_intron MGP_WSBEiJ_T0087263.1 MGP_WSBEiJ_G0032676.1 mouse_genomes_project 8 35630635 35645881 - MGP_WSBEiJ_P0087263 Dlc1 protein_coding protein_coding MGP_WSBEiJ_T0087153.1 MGP_WSBEiJ_G0032631.1 mouse_genomes_project 8 25209059 25224696 + MGP_WSBEiJ_P0087153 Erlin2 protein_coding protein_coding MGP_WSBEiJ_T0099803.1 MGP_WSBEiJ_G0038466.1 mouse_genomes_project 8 90272620 90272752 - Gm24212 snoRNA snoRNA MGP_WSBEiJ_T0008916.1 MGP_WSBEiJ_G0007179.1 mouse_genomes_project 8 8112472 8116499 - 3930402G23Rik lincRNA lincRNA MGP_WSBEiJ_T0015449.1 MGP_WSBEiJ_G0013579.1 mouse_genomes_project 8 19670824 19671245 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089387.1 MGP_WSBEiJ_G0033346.1 mouse_genomes_project 8 124679890 124715854 - MGP_WSBEiJ_P0089387 Car5a protein_coding protein_coding MGP_WSBEiJ_T0089388.1 MGP_WSBEiJ_G0033346.1 mouse_genomes_project 8 124683034 124695712 - Car5a protein_coding processed_transcript MGP_WSBEiJ_T0088218.1 MGP_WSBEiJ_G0032966.1 mouse_genomes_project 8 83977463 83981899 + Ptger1 protein_coding retained_intron MGP_WSBEiJ_T0088219.1 MGP_WSBEiJ_G0032966.1 mouse_genomes_project 8 83977493 83983381 + MGP_WSBEiJ_P0088219 Ptger1 protein_coding protein_coding MGP_WSBEiJ_T0008980.1 MGP_WSBEiJ_G0007232.1 mouse_genomes_project 8 87564223 87571905 + Gm5118 lincRNA lincRNA MGP_WSBEiJ_T0088537.1 MGP_WSBEiJ_G0033049.1 mouse_genomes_project 8 89194727 89203934 - MGP_WSBEiJ_P0088537 Snx20 protein_coding protein_coding MGP_WSBEiJ_T0088273.1 MGP_WSBEiJ_G0032982.1 mouse_genomes_project 8 84412400 84442630 + MGP_WSBEiJ_P0088273 Rfx1 protein_coding protein_coding MGP_WSBEiJ_T0088208.1 MGP_WSBEiJ_G0032960.1 mouse_genomes_project 8 83684573 83726318 + MGP_WSBEiJ_P0088208 Clgn protein_coding protein_coding MGP_WSBEiJ_T0088209.1 MGP_WSBEiJ_G0032960.1 mouse_genomes_project 8 83684584 83724597 + MGP_WSBEiJ_P0088209 Clgn protein_coding protein_coding MGP_WSBEiJ_T0002297.1 MGP_WSBEiJ_G0002214.1 mouse_genomes_project 8 123181932 123182767 - TEC TEC MGP_WSBEiJ_T0015498.1 MGP_WSBEiJ_G0013628.1 mouse_genomes_project 8 123393247 123393928 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015443.1 MGP_WSBEiJ_G0013573.1 mouse_genomes_project 8 16127365 16127740 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005330.1 MGP_WSBEiJ_G0004516.1 mouse_genomes_project 8 129563296 129588850 + Gm26759 antisense antisense MGP_WSBEiJ_T0010793.1 MGP_WSBEiJ_G0008950.1 mouse_genomes_project 8 73591945 73592054 - Gm23255 miRNA miRNA MGP_WSBEiJ_T0087495.1 MGP_WSBEiJ_G0032743.1 mouse_genomes_project 8 54000396 54010741 + MGP_WSBEiJ_P0087495 Spata4 protein_coding protein_coding MGP_WSBEiJ_T0088777.1 MGP_WSBEiJ_G0033137.1 mouse_genomes_project 8 105851973 105904986 - MGP_WSBEiJ_P0088777 Cmtm4 protein_coding protein_coding MGP_WSBEiJ_T0097469.1 MGP_WSBEiJ_G0036138.1 mouse_genomes_project 8 86429627 86432024 + Hm629797 sense_intronic sense_intronic MGP_WSBEiJ_T0089219.1 MGP_WSBEiJ_G0033299.1 mouse_genomes_project 8 119491464 119538933 + MGP_WSBEiJ_P0089219 Bco1 protein_coding protein_coding MGP_WSBEiJ_T0089220.1 MGP_WSBEiJ_G0033299.1 mouse_genomes_project 8 119491475 119536438 + MGP_WSBEiJ_P0089220 Bco1 protein_coding protein_coding MGP_WSBEiJ_T0089221.1 MGP_WSBEiJ_G0033299.1 mouse_genomes_project 8 119491608 119538536 + MGP_WSBEiJ_P0089221 Bco1 protein_coding protein_coding MGP_WSBEiJ_T0089607.1 MGP_WSBEiJ_G0033411.1 mouse_genomes_project 8 127804456 127847639 - MGP_WSBEiJ_P0089607 Egln1 protein_coding protein_coding MGP_WSBEiJ_T0086933.1 MGP_WSBEiJ_G0032545.1 mouse_genomes_project 8 16623829 16626619 + MGP_WSBEiJ_P0086933 Defb34 protein_coding protein_coding MGP_WSBEiJ_T0087294.1 MGP_WSBEiJ_G0032686.1 mouse_genomes_project 8 39371961 39452723 - MGP_WSBEiJ_P0087294 Mtmr7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087295.1 MGP_WSBEiJ_G0032686.1 mouse_genomes_project 8 39371967 39452708 - MGP_WSBEiJ_P0087295 Mtmr7 protein_coding protein_coding MGP_WSBEiJ_T0087296.1 MGP_WSBEiJ_G0032686.1 mouse_genomes_project 8 39374745 39408025 - MGP_WSBEiJ_P0087296 Mtmr7 protein_coding protein_coding MGP_WSBEiJ_T0087297.1 MGP_WSBEiJ_G0032686.1 mouse_genomes_project 8 39375549 39452726 - MGP_WSBEiJ_P0087297 Mtmr7 protein_coding protein_coding MGP_WSBEiJ_T0087298.1 MGP_WSBEiJ_G0032686.1 mouse_genomes_project 8 39386891 39452691 - MGP_WSBEiJ_P0087298 Mtmr7 protein_coding protein_coding MGP_WSBEiJ_T0087299.1 MGP_WSBEiJ_G0032686.1 mouse_genomes_project 8 39424094 39452731 - Mtmr7 protein_coding processed_transcript MGP_WSBEiJ_T0005268.1 MGP_WSBEiJ_G0004462.1 mouse_genomes_project 8 25228372 25229038 - Proscos antisense antisense MGP_WSBEiJ_T0005269.1 MGP_WSBEiJ_G0004462.1 mouse_genomes_project 8 25228377 25228993 - Proscos antisense antisense MGP_WSBEiJ_T0088252.1 MGP_WSBEiJ_G0032972.1 mouse_genomes_project 8 84287644 84303996 + MGP_WSBEiJ_P0088252 Asf1b protein_coding protein_coding MGP_WSBEiJ_T0088253.1 MGP_WSBEiJ_G0032972.1 mouse_genomes_project 8 84287851 84301644 + Asf1b protein_coding processed_transcript MGP_WSBEiJ_T0088254.1 MGP_WSBEiJ_G0032972.1 mouse_genomes_project 8 84298845 84302342 + Asf1b protein_coding retained_intron MGP_WSBEiJ_T0087240.1 MGP_WSBEiJ_G0032668.1 mouse_genomes_project 8 33939855 33954666 + MGP_WSBEiJ_P0087240 Ppp1r3b protein_coding protein_coding MGP_WSBEiJ_T0087889.1 MGP_WSBEiJ_G0032853.1 mouse_genomes_project 8 70664649 70666916 - MGP_WSBEiJ_P0087889 Mpv17l2 protein_coding protein_coding MGP_WSBEiJ_T0005286.1 MGP_WSBEiJ_G0004478.1 mouse_genomes_project 8 68163594 68167446 + 1700125H03Rik antisense antisense MGP_WSBEiJ_T0005287.1 MGP_WSBEiJ_G0004478.1 mouse_genomes_project 8 68163626 68170867 + 1700125H03Rik antisense antisense MGP_WSBEiJ_T0089618.1 MGP_WSBEiJ_G0033414.1 mouse_genomes_project 8 128349687 128436299 - MGP_WSBEiJ_P0089618 Sipa1l2 protein_coding protein_coding MGP_WSBEiJ_T0087751.1 MGP_WSBEiJ_G0032821.1 mouse_genomes_project 8 69988594 69997669 + MGP_WSBEiJ_P0087751 protein_coding protein_coding MGP_WSBEiJ_T0087752.1 MGP_WSBEiJ_G0032821.1 mouse_genomes_project 8 69988796 69995954 + protein_coding retained_intron MGP_WSBEiJ_T0087753.1 MGP_WSBEiJ_G0032821.1 mouse_genomes_project 8 69988800 70021602 + MGP_WSBEiJ_P0087753 protein_coding protein_coding MGP_WSBEiJ_T0087754.1 MGP_WSBEiJ_G0032821.1 mouse_genomes_project 8 69988802 69995968 + MGP_WSBEiJ_P0087754 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087755.1 MGP_WSBEiJ_G0032821.1 mouse_genomes_project 8 69988812 69997674 + MGP_WSBEiJ_P0087755 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087756.1 MGP_WSBEiJ_G0032821.1 mouse_genomes_project 8 69989366 69997732 + MGP_WSBEiJ_P0087756 protein_coding protein_coding MGP_WSBEiJ_T0089027.1 MGP_WSBEiJ_G0033234.1 mouse_genomes_project 8 111421365 111429522 + MGP_WSBEiJ_P0089027 Txnl4b protein_coding protein_coding MGP_WSBEiJ_T0089028.1 MGP_WSBEiJ_G0033234.1 mouse_genomes_project 8 111424357 111428994 + MGP_WSBEiJ_P0089028 Txnl4b protein_coding protein_coding MGP_WSBEiJ_T0098540.1 MGP_WSBEiJ_G0037203.1 mouse_genomes_project 8 52841904 52841966 + Gm27964 snRNA snRNA MGP_WSBEiJ_T0088771.1 MGP_WSBEiJ_G0033132.1 mouse_genomes_project 8 105736628 105749747 + MGP_WSBEiJ_P0088771 Cklf protein_coding protein_coding MGP_WSBEiJ_T0088772.1 MGP_WSBEiJ_G0033132.1 mouse_genomes_project 8 105736657 105751253 + MGP_WSBEiJ_P0088772 Cklf protein_coding protein_coding MGP_WSBEiJ_T0017893.1 MGP_WSBEiJ_G0015146.1 mouse_genomes_project 8 125151108 125153521 + Gm20681 processed_transcript processed_transcript MGP_WSBEiJ_T0005318.1 MGP_WSBEiJ_G0004505.1 mouse_genomes_project 8 122636993 122646060 - Gm15684 antisense antisense MGP_WSBEiJ_T0088546.1 MGP_WSBEiJ_G0033054.1 mouse_genomes_project 8 89783905 89784423 - MGP_WSBEiJ_P0088546 protein_coding protein_coding MGP_WSBEiJ_T0010845.1 MGP_WSBEiJ_G0009002.1 mouse_genomes_project 8 131370013 131370091 - Mir21c miRNA miRNA MGP_WSBEiJ_T0088761.1 MGP_WSBEiJ_G0033126.1 mouse_genomes_project 8 103929170 103990627 - MGP_WSBEiJ_P0088761 Cdh11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087234.1 MGP_WSBEiJ_G0032662.1 mouse_genomes_project 8 32566298 32576417 + MGP_WSBEiJ_P0087234 Mboat4 protein_coding protein_coding MGP_WSBEiJ_T0010824.1 MGP_WSBEiJ_G0008981.1 mouse_genomes_project 8 109321841 109321911 + Mir140 miRNA miRNA MGP_WSBEiJ_T0011509.1 MGP_WSBEiJ_G0009666.1 mouse_genomes_project 8 1209088 1209372 + Gm26102 misc_RNA misc_RNA MGP_WSBEiJ_T0008928.1 MGP_WSBEiJ_G0007187.1 mouse_genomes_project 8 20425141 20428235 + Gm17491 lincRNA lincRNA MGP_WSBEiJ_T0089423.1 MGP_WSBEiJ_G0033354.1 mouse_genomes_project 8 125235997 125242503 - MGP_WSBEiJ_P0089423 Snai3 protein_coding protein_coding MGP_WSBEiJ_T0086601.1 MGP_WSBEiJ_G0032444.1 mouse_genomes_project 8 556540 558714 - Pcp2 protein_coding retained_intron MGP_WSBEiJ_T0086602.1 MGP_WSBEiJ_G0032444.1 mouse_genomes_project 8 556540 558714 - MGP_WSBEiJ_P0086602 Pcp2 protein_coding protein_coding MGP_WSBEiJ_T0086603.1 MGP_WSBEiJ_G0032444.1 mouse_genomes_project 8 556546 558714 - Pcp2 protein_coding retained_intron MGP_WSBEiJ_T0086604.1 MGP_WSBEiJ_G0032444.1 mouse_genomes_project 8 556546 558171 - MGP_WSBEiJ_P0086604 Pcp2 protein_coding protein_coding MGP_WSBEiJ_T0086605.1 MGP_WSBEiJ_G0032444.1 mouse_genomes_project 8 556546 558451 - MGP_WSBEiJ_P0086605 Pcp2 protein_coding protein_coding MGP_WSBEiJ_T0086606.1 MGP_WSBEiJ_G0032444.1 mouse_genomes_project 8 556546 558218 - MGP_WSBEiJ_P0086606 Pcp2 protein_coding protein_coding MGP_WSBEiJ_T0086607.1 MGP_WSBEiJ_G0032444.1 mouse_genomes_project 8 556549 558694 - Pcp2 protein_coding processed_transcript MGP_WSBEiJ_T0089409.1 MGP_WSBEiJ_G0033349.1 mouse_genomes_project 8 125131745 125135308 - MGP_WSBEiJ_P0089409 Trhr2 protein_coding protein_coding MGP_WSBEiJ_T0087604.1 MGP_WSBEiJ_G0032773.1 mouse_genomes_project 8 64454733 64471105 - MGP_WSBEiJ_P0087604 Msmo1 protein_coding protein_coding MGP_WSBEiJ_T0087605.1 MGP_WSBEiJ_G0032773.1 mouse_genomes_project 8 64454803 64470894 - Msmo1 protein_coding processed_transcript MGP_WSBEiJ_T0087606.1 MGP_WSBEiJ_G0032773.1 mouse_genomes_project 8 64454821 64470891 - Msmo1 protein_coding retained_intron MGP_WSBEiJ_T0087607.1 MGP_WSBEiJ_G0032773.1 mouse_genomes_project 8 64455218 64458526 - Msmo1 protein_coding processed_transcript MGP_WSBEiJ_T0087608.1 MGP_WSBEiJ_G0032773.1 mouse_genomes_project 8 64461052 64468418 - MGP_WSBEiJ_P0087608 Msmo1 protein_coding protein_coding MGP_WSBEiJ_T0087609.1 MGP_WSBEiJ_G0032773.1 mouse_genomes_project 8 64462368 64470861 - Msmo1 protein_coding retained_intron MGP_WSBEiJ_T0087610.1 MGP_WSBEiJ_G0032773.1 mouse_genomes_project 8 64465035 64470861 - MGP_WSBEiJ_P0087610 Msmo1 protein_coding protein_coding MGP_WSBEiJ_T0098560.1 MGP_WSBEiJ_G0037223.1 mouse_genomes_project 8 103810003 103810066 + Gm24602 snRNA snRNA MGP_WSBEiJ_T0011529.1 MGP_WSBEiJ_G0009686.1 mouse_genomes_project 8 114700693 114700798 + Gm22664 misc_RNA misc_RNA MGP_WSBEiJ_T0087264.1 MGP_WSBEiJ_G0032677.1 mouse_genomes_project 8 35686188 35688115 + MGP_WSBEiJ_P0087264 AI429214 protein_coding protein_coding MGP_WSBEiJ_T0086978.1 MGP_WSBEiJ_G0032578.1 mouse_genomes_project 8 20093837 20116905 - MGP_WSBEiJ_P0086978 Ckap2 protein_coding protein_coding MGP_WSBEiJ_T0086979.1 MGP_WSBEiJ_G0032578.1 mouse_genomes_project 8 20094416 20116918 - MGP_WSBEiJ_P0086979 Ckap2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089562.1 MGP_WSBEiJ_G0033396.1 mouse_genomes_project 8 126887987 126914475 + MGP_WSBEiJ_P0089562 Urb2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089563.1 MGP_WSBEiJ_G0033396.1 mouse_genomes_project 8 126888015 126914476 + MGP_WSBEiJ_P0089563 Urb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005271.1 MGP_WSBEiJ_G0004464.1 mouse_genomes_project 8 39874291 39876539 + Gm16192 antisense antisense MGP_WSBEiJ_T0088989.1 MGP_WSBEiJ_G0033223.1 mouse_genomes_project 8 108799929 108805795 - MGP_WSBEiJ_P0088989 Tmed6 protein_coding protein_coding MGP_WSBEiJ_T0087337.1 MGP_WSBEiJ_G0032700.1 mouse_genomes_project 8 43918280 44037520 + MGP_WSBEiJ_P0087337 Fat1 protein_coding protein_coding MGP_WSBEiJ_T0087338.1 MGP_WSBEiJ_G0032700.1 mouse_genomes_project 8 43921359 44037527 + MGP_WSBEiJ_P0087338 Fat1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087339.1 MGP_WSBEiJ_G0032700.1 mouse_genomes_project 8 43934836 44037520 + MGP_WSBEiJ_P0087339 Fat1 protein_coding protein_coding MGP_WSBEiJ_T0087340.1 MGP_WSBEiJ_G0032700.1 mouse_genomes_project 8 44018667 44037508 + MGP_WSBEiJ_P0087340 Fat1 protein_coding protein_coding MGP_WSBEiJ_T0087341.1 MGP_WSBEiJ_G0032700.1 mouse_genomes_project 8 44029853 44036113 + MGP_WSBEiJ_P0087341 Fat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087342.1 MGP_WSBEiJ_G0032700.1 mouse_genomes_project 8 44029853 44036113 + MGP_WSBEiJ_P0087342 Fat1 protein_coding protein_coding MGP_WSBEiJ_T0087343.1 MGP_WSBEiJ_G0032700.1 mouse_genomes_project 8 44030455 44035782 + Fat1 protein_coding retained_intron MGP_WSBEiJ_T0087399.1 MGP_WSBEiJ_G0032713.1 mouse_genomes_project 8 45027752 45061855 + MGP_WSBEiJ_P0087399 Lrp2bp protein_coding protein_coding MGP_WSBEiJ_T0087400.1 MGP_WSBEiJ_G0032713.1 mouse_genomes_project 8 45027757 45061586 + MGP_WSBEiJ_P0087400 Lrp2bp protein_coding protein_coding MGP_WSBEiJ_T0087401.1 MGP_WSBEiJ_G0032713.1 mouse_genomes_project 8 45043983 45063685 + MGP_WSBEiJ_P0087401 Lrp2bp protein_coding protein_coding MGP_WSBEiJ_T0087402.1 MGP_WSBEiJ_G0032713.1 mouse_genomes_project 8 45043992 45061843 + MGP_WSBEiJ_P0087402 Lrp2bp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087403.1 MGP_WSBEiJ_G0032713.1 mouse_genomes_project 8 45045126 45051654 + Lrp2bp protein_coding processed_transcript MGP_WSBEiJ_T0087404.1 MGP_WSBEiJ_G0032713.1 mouse_genomes_project 8 45053404 45063656 + Lrp2bp protein_coding processed_transcript MGP_WSBEiJ_T0087947.1 MGP_WSBEiJ_G0032872.1 mouse_genomes_project 8 71308045 71317310 + MGP_WSBEiJ_P0087947 Babam1 protein_coding protein_coding MGP_WSBEiJ_T0008954.1 MGP_WSBEiJ_G0007209.1 mouse_genomes_project 8 56916491 56938439 + 2500002B13Rik lincRNA lincRNA MGP_WSBEiJ_T0009022.1 MGP_WSBEiJ_G0007257.1 mouse_genomes_project 8 107240562 107253173 - Gm5914 lincRNA lincRNA MGP_WSBEiJ_T0009023.1 MGP_WSBEiJ_G0007257.1 mouse_genomes_project 8 107240576 107253308 - Gm5914 lincRNA lincRNA MGP_WSBEiJ_T0099798.1 MGP_WSBEiJ_G0038461.1 mouse_genomes_project 8 82672726 82672862 + Gm25138 snoRNA snoRNA MGP_WSBEiJ_T0088213.1 MGP_WSBEiJ_G0032963.1 mouse_genomes_project 8 83871175 83895991 - MGP_WSBEiJ_P0088213 Tecr protein_coding protein_coding MGP_WSBEiJ_T0088214.1 MGP_WSBEiJ_G0032963.1 mouse_genomes_project 8 83871175 83895991 - MGP_WSBEiJ_P0088214 Tecr protein_coding protein_coding MGP_WSBEiJ_T0088215.1 MGP_WSBEiJ_G0032963.1 mouse_genomes_project 8 83871175 83895929 - MGP_WSBEiJ_P0088215 Tecr protein_coding protein_coding MGP_WSBEiJ_T0086769.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10057201 10171309 + MGP_WSBEiJ_P0086769 Atp11a protein_coding protein_coding MGP_WSBEiJ_T0086770.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10057203 10171309 + MGP_WSBEiJ_P0086770 Atp11a protein_coding protein_coding MGP_WSBEiJ_T0086771.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10057256 10162301 + MGP_WSBEiJ_P0086771 Atp11a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086772.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10113084 10116007 + Atp11a protein_coding retained_intron MGP_WSBEiJ_T0086773.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10124023 10130161 + Atp11a protein_coding retained_intron MGP_WSBEiJ_T0086774.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10136786 10171248 + MGP_WSBEiJ_P0086774 Atp11a protein_coding protein_coding MGP_WSBEiJ_T0086775.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10149476 10159847 + MGP_WSBEiJ_P0086775 Atp11a protein_coding protein_coding MGP_WSBEiJ_T0086776.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10151458 10153342 + Atp11a protein_coding processed_transcript MGP_WSBEiJ_T0086777.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10159536 10164786 + MGP_WSBEiJ_P0086777 Atp11a protein_coding protein_coding MGP_WSBEiJ_T0086778.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10160542 10164783 + MGP_WSBEiJ_P0086778 Atp11a protein_coding protein_coding MGP_WSBEiJ_T0086779.1 MGP_WSBEiJ_G0032498.1 mouse_genomes_project 8 10164145 10168151 + Atp11a protein_coding retained_intron MGP_WSBEiJ_T0088557.1 MGP_WSBEiJ_G0033059.1 mouse_genomes_project 8 91777335 91798446 - MGP_WSBEiJ_P0088557 Aktip protein_coding protein_coding MGP_WSBEiJ_T0088561.1 MGP_WSBEiJ_G0033059.1 mouse_genomes_project 8 91790843 91801548 - MGP_WSBEiJ_P0088561 Aktip protein_coding protein_coding MGP_WSBEiJ_T0088562.1 MGP_WSBEiJ_G0033059.1 mouse_genomes_project 8 91790843 91801025 - MGP_WSBEiJ_P0088562 Aktip protein_coding protein_coding MGP_WSBEiJ_T0088563.1 MGP_WSBEiJ_G0033059.1 mouse_genomes_project 8 91791799 91801106 - MGP_WSBEiJ_P0088563 Aktip protein_coding protein_coding MGP_WSBEiJ_T0088564.1 MGP_WSBEiJ_G0033059.1 mouse_genomes_project 8 91791961 91801110 - MGP_WSBEiJ_P0088564 Aktip protein_coding protein_coding MGP_WSBEiJ_T0088565.1 MGP_WSBEiJ_G0033059.1 mouse_genomes_project 8 91798379 91799184 - Aktip protein_coding processed_transcript MGP_WSBEiJ_T0086965.1 MGP_WSBEiJ_G0032574.1 mouse_genomes_project 8 19903116 19976016 - MGP_WSBEiJ_P0086965 Atp7b protein_coding protein_coding MGP_WSBEiJ_T0086966.1 MGP_WSBEiJ_G0032574.1 mouse_genomes_project 8 19904982 19975730 - MGP_WSBEiJ_P0086966 Atp7b protein_coding protein_coding MGP_WSBEiJ_T0099820.1 MGP_WSBEiJ_G0038483.1 mouse_genomes_project 8 129967454 129967588 - Gm26397 snoRNA snoRNA MGP_WSBEiJ_T0008931.1 MGP_WSBEiJ_G0007190.1 mouse_genomes_project 8 25335260 25342057 + lincRNA lincRNA MGP_WSBEiJ_T0008962.1 MGP_WSBEiJ_G0007216.1 mouse_genomes_project 8 70896820 70917304 - lincRNA lincRNA MGP_WSBEiJ_T0089598.1 MGP_WSBEiJ_G0033407.1 mouse_genomes_project 8 127736747 127753936 - MGP_WSBEiJ_P0089598 2810004N23Rik protein_coding protein_coding MGP_WSBEiJ_T0088272.1 MGP_WSBEiJ_G0032981.1 mouse_genomes_project 8 84410792 84412852 - MGP_WSBEiJ_P0088272 protein_coding protein_coding MGP_WSBEiJ_T0088914.1 MGP_WSBEiJ_G0033193.1 mouse_genomes_project 8 107543298 107544755 + MGP_WSBEiJ_P0088914 Nrn1l protein_coding protein_coding MGP_WSBEiJ_T0088915.1 MGP_WSBEiJ_G0033193.1 mouse_genomes_project 8 107543303 107544749 + MGP_WSBEiJ_P0088915 Nrn1l protein_coding protein_coding MGP_WSBEiJ_T0099799.1 MGP_WSBEiJ_G0038462.1 mouse_genomes_project 8 84744354 84744487 - Gm23626 snoRNA snoRNA MGP_WSBEiJ_T0087872.1 MGP_WSBEiJ_G0032845.1 mouse_genomes_project 8 70511395 70514099 - MGP_WSBEiJ_P0087872 Gdf15 protein_coding protein_coding MGP_WSBEiJ_T0087873.1 MGP_WSBEiJ_G0032845.1 mouse_genomes_project 8 70511396 70514460 - MGP_WSBEiJ_P0087873 Gdf15 protein_coding protein_coding MGP_WSBEiJ_T0088802.1 MGP_WSBEiJ_G0033146.1 mouse_genomes_project 8 106268684 106281931 + MGP_WSBEiJ_P0088802 Ces2a protein_coding protein_coding MGP_WSBEiJ_T0088949.1 MGP_WSBEiJ_G0033205.1 mouse_genomes_project 8 107822525 107836977 + MGP_WSBEiJ_P0088949 Pla2g15 protein_coding protein_coding MGP_WSBEiJ_T0087821.1 MGP_WSBEiJ_G0032832.1 mouse_genomes_project 8 70240549 70249195 + MGP_WSBEiJ_P0087821 Comp protein_coding protein_coding MGP_WSBEiJ_T0087595.1 MGP_WSBEiJ_G0032769.1 mouse_genomes_project 8 62588103 63034777 + MGP_WSBEiJ_P0087595 protein_coding protein_coding MGP_WSBEiJ_T0087596.1 MGP_WSBEiJ_G0032769.1 mouse_genomes_project 8 62588326 63034785 + MGP_WSBEiJ_P0087596 protein_coding protein_coding MGP_WSBEiJ_T0087597.1 MGP_WSBEiJ_G0032769.1 mouse_genomes_project 8 62588455 62808758 + protein_coding retained_intron MGP_WSBEiJ_T0087598.1 MGP_WSBEiJ_G0032769.1 mouse_genomes_project 8 62588455 63035028 + MGP_WSBEiJ_P0087598 protein_coding protein_coding MGP_WSBEiJ_T0087599.1 MGP_WSBEiJ_G0032769.1 mouse_genomes_project 8 62588933 63035019 + MGP_WSBEiJ_P0087599 protein_coding protein_coding MGP_WSBEiJ_T0087600.1 MGP_WSBEiJ_G0032769.1 mouse_genomes_project 8 62589058 62605710 + protein_coding processed_transcript MGP_WSBEiJ_T0009016.1 MGP_WSBEiJ_G0007253.1 mouse_genomes_project 8 95320882 95333317 - 9330175E14Rik lincRNA lincRNA MGP_WSBEiJ_T0009017.1 MGP_WSBEiJ_G0007253.1 mouse_genomes_project 8 95328792 95333442 - 9330175E14Rik lincRNA lincRNA MGP_WSBEiJ_T0009018.1 MGP_WSBEiJ_G0007253.1 mouse_genomes_project 8 95332286 95334269 - 9330175E14Rik lincRNA lincRNA MGP_WSBEiJ_T0098554.1 MGP_WSBEiJ_G0037217.1 mouse_genomes_project 8 85726380 85726487 + Gm22336 snRNA snRNA MGP_WSBEiJ_T0098569.1 MGP_WSBEiJ_G0037232.1 mouse_genomes_project 8 120919840 120919947 - Gm24035 snRNA snRNA MGP_WSBEiJ_T0088897.1 MGP_WSBEiJ_G0033184.1 mouse_genomes_project 8 107324421 107328694 - MGP_WSBEiJ_P0088897 Enkd1 protein_coding protein_coding MGP_WSBEiJ_T0087513.1 MGP_WSBEiJ_G0032749.1 mouse_genomes_project 8 55933178 55946383 - MGP_WSBEiJ_P0087513 Cep44 protein_coding protein_coding MGP_WSBEiJ_T0087514.1 MGP_WSBEiJ_G0032749.1 mouse_genomes_project 8 55933178 55951775 - MGP_WSBEiJ_P0087514 Cep44 protein_coding protein_coding MGP_WSBEiJ_T0087515.1 MGP_WSBEiJ_G0032749.1 mouse_genomes_project 8 55943823 55951761 - MGP_WSBEiJ_P0087515 Cep44 protein_coding protein_coding MGP_WSBEiJ_T0087516.1 MGP_WSBEiJ_G0032749.1 mouse_genomes_project 8 55945111 55951717 - MGP_WSBEiJ_P0087516 Cep44 protein_coding protein_coding MGP_WSBEiJ_T0087517.1 MGP_WSBEiJ_G0032749.1 mouse_genomes_project 8 55945178 55951790 - MGP_WSBEiJ_P0087517 Cep44 protein_coding protein_coding MGP_WSBEiJ_T0087518.1 MGP_WSBEiJ_G0032749.1 mouse_genomes_project 8 55946369 55951965 - MGP_WSBEiJ_P0087518 Cep44 protein_coding protein_coding MGP_WSBEiJ_T0087519.1 MGP_WSBEiJ_G0032749.1 mouse_genomes_project 8 55949903 55951180 - Cep44 protein_coding processed_transcript MGP_WSBEiJ_T0087520.1 MGP_WSBEiJ_G0032749.1 mouse_genomes_project 8 55950251 55951721 - Cep44 protein_coding processed_transcript MGP_WSBEiJ_T0098571.1 MGP_WSBEiJ_G0037234.1 mouse_genomes_project 8 125307174 125307281 - Gm26497 snRNA snRNA MGP_WSBEiJ_T0087335.1 MGP_WSBEiJ_G0032698.1 mouse_genomes_project 8 42533518 42549581 - MGP_WSBEiJ_P0087335 Gm5346 protein_coding protein_coding MGP_WSBEiJ_T0087439.1 MGP_WSBEiJ_G0032721.1 mouse_genomes_project 8 45675373 45698823 + MGP_WSBEiJ_P0087439 Casp3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086631.1 MGP_WSBEiJ_G0032451.1 mouse_genomes_project 8 682180 687771 - MGP_WSBEiJ_P0086631 Cd209a protein_coding protein_coding MGP_WSBEiJ_T0086899.1 MGP_WSBEiJ_G0032532.1 mouse_genomes_project 8 12454266 12459686 - MGP_WSBEiJ_P0086899 protein_coding protein_coding MGP_WSBEiJ_T0086900.1 MGP_WSBEiJ_G0032532.1 mouse_genomes_project 8 12456068 12459695 - MGP_WSBEiJ_P0086900 protein_coding protein_coding MGP_WSBEiJ_T0088210.1 MGP_WSBEiJ_G0032961.1 mouse_genomes_project 8 83839051 83840147 + MGP_WSBEiJ_P0088210 Olfr370 protein_coding protein_coding MGP_WSBEiJ_T0089384.1 MGP_WSBEiJ_G0033345.1 mouse_genomes_project 8 124645136 124671464 - MGP_WSBEiJ_P0089384 Slc7a5 protein_coding protein_coding MGP_WSBEiJ_T0089385.1 MGP_WSBEiJ_G0033345.1 mouse_genomes_project 8 124646789 124647902 - Slc7a5 protein_coding retained_intron MGP_WSBEiJ_T0089386.1 MGP_WSBEiJ_G0033345.1 mouse_genomes_project 8 124652280 124660430 - Slc7a5 protein_coding processed_transcript MGP_WSBEiJ_T0005295.1 MGP_WSBEiJ_G0004485.1 mouse_genomes_project 8 85754020 85754444 + antisense antisense MGP_WSBEiJ_T0086918.1 MGP_WSBEiJ_G0032536.1 mouse_genomes_project 8 16162528 16215871 - MGP_WSBEiJ_P0086918 Angpt2 protein_coding protein_coding MGP_WSBEiJ_T0086919.1 MGP_WSBEiJ_G0032536.1 mouse_genomes_project 8 16164352 16171756 - Angpt2 protein_coding processed_transcript MGP_WSBEiJ_T0088419.1 MGP_WSBEiJ_G0033018.1 mouse_genomes_project 8 85454341 85476532 + MGP_WSBEiJ_P0088419 Tnpo2 protein_coding protein_coding MGP_WSBEiJ_T0088420.1 MGP_WSBEiJ_G0033018.1 mouse_genomes_project 8 85454594 85476532 + MGP_WSBEiJ_P0088420 Tnpo2 protein_coding protein_coding MGP_WSBEiJ_T0088421.1 MGP_WSBEiJ_G0033018.1 mouse_genomes_project 8 85456269 85476536 + MGP_WSBEiJ_P0088421 Tnpo2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089450.1 MGP_WSBEiJ_G0033362.1 mouse_genomes_project 8 125405202 125410604 + MGP_WSBEiJ_P0089450 Trappc2l protein_coding protein_coding MGP_WSBEiJ_T0099778.1 MGP_WSBEiJ_G0038441.1 mouse_genomes_project 8 42282835 42282965 + Gm22986 snoRNA snoRNA MGP_WSBEiJ_T0088990.1 MGP_WSBEiJ_G0033224.1 mouse_genomes_project 8 108808961 108838029 - MGP_WSBEiJ_P0088990 Terf2 protein_coding protein_coding MGP_WSBEiJ_T0088991.1 MGP_WSBEiJ_G0033224.1 mouse_genomes_project 8 108808963 108837674 - MGP_WSBEiJ_P0088991 Terf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088992.1 MGP_WSBEiJ_G0033224.1 mouse_genomes_project 8 108808963 108838029 - MGP_WSBEiJ_P0088992 Terf2 protein_coding protein_coding MGP_WSBEiJ_T0088993.1 MGP_WSBEiJ_G0033224.1 mouse_genomes_project 8 108809489 108837998 - MGP_WSBEiJ_P0088993 Terf2 protein_coding protein_coding MGP_WSBEiJ_T0088994.1 MGP_WSBEiJ_G0033224.1 mouse_genomes_project 8 108815078 108838031 - MGP_WSBEiJ_P0088994 Terf2 protein_coding protein_coding MGP_WSBEiJ_T0088995.1 MGP_WSBEiJ_G0033224.1 mouse_genomes_project 8 108815880 108819434 - Terf2 protein_coding retained_intron MGP_WSBEiJ_T0088996.1 MGP_WSBEiJ_G0033224.1 mouse_genomes_project 8 108818986 108820989 - Terf2 protein_coding retained_intron MGP_WSBEiJ_T0088997.1 MGP_WSBEiJ_G0033224.1 mouse_genomes_project 8 108818995 108822765 - Terf2 protein_coding retained_intron MGP_WSBEiJ_T0086686.1 MGP_WSBEiJ_G0032466.1 mouse_genomes_project 8 1219185 1260282 - MGP_WSBEiJ_P0086686 Elavl1 protein_coding protein_coding MGP_WSBEiJ_T0088070.1 MGP_WSBEiJ_G0032911.1 mouse_genomes_project 8 72426579 72448031 + MGP_WSBEiJ_P0088070 1700030K09Rik protein_coding protein_coding MGP_WSBEiJ_T0088071.1 MGP_WSBEiJ_G0032911.1 mouse_genomes_project 8 72426631 72447671 + MGP_WSBEiJ_P0088071 1700030K09Rik protein_coding protein_coding MGP_WSBEiJ_T0088072.1 MGP_WSBEiJ_G0032911.1 mouse_genomes_project 8 72444474 72445454 + 1700030K09Rik protein_coding retained_intron MGP_WSBEiJ_T0088932.1 MGP_WSBEiJ_G0033202.1 mouse_genomes_project 8 107671313 107673575 - MGP_WSBEiJ_P0088932 Ddx28 protein_coding protein_coding MGP_WSBEiJ_T0099765.1 MGP_WSBEiJ_G0038428.1 mouse_genomes_project 8 14309095 14309215 + Gm25278 snoRNA snoRNA MGP_WSBEiJ_T0088130.1 MGP_WSBEiJ_G0032932.1 mouse_genomes_project 8 77718573 77790241 - MGP_WSBEiJ_P0088130 Ednra protein_coding protein_coding MGP_WSBEiJ_T0088131.1 MGP_WSBEiJ_G0032932.1 mouse_genomes_project 8 77725233 77790269 - Ednra protein_coding retained_intron MGP_WSBEiJ_T0086564.1 MGP_WSBEiJ_G0032432.1 mouse_genomes_project 8 36031 174912 - MGP_WSBEiJ_P0086564 Insr protein_coding protein_coding MGP_WSBEiJ_T0086565.1 MGP_WSBEiJ_G0032432.1 mouse_genomes_project 8 40759 175685 - MGP_WSBEiJ_P0086565 Insr protein_coding unknown_likely_coding MGP_WSBEiJ_T0086566.1 MGP_WSBEiJ_G0032432.1 mouse_genomes_project 8 102053 174846 - Insr protein_coding retained_intron MGP_WSBEiJ_T0011525.1 MGP_WSBEiJ_G0009682.1 mouse_genomes_project 8 95604211 95604481 - Gm22846 misc_RNA misc_RNA MGP_WSBEiJ_T0002283.1 MGP_WSBEiJ_G0002201.1 mouse_genomes_project 8 10614302 10616418 - TEC TEC MGP_WSBEiJ_T0099817.1 MGP_WSBEiJ_G0038480.1 mouse_genomes_project 8 121234615 121234703 + Gm22999 snoRNA snoRNA MGP_WSBEiJ_T0010820.1 MGP_WSBEiJ_G0008977.1 mouse_genomes_project 8 106898375 106898472 - Mir328 miRNA miRNA MGP_WSBEiJ_T0010798.1 MGP_WSBEiJ_G0008955.1 mouse_genomes_project 8 84350186 84350305 - Mir1199 miRNA miRNA MGP_WSBEiJ_T0088669.1 MGP_WSBEiJ_G0033097.1 mouse_genomes_project 8 95680524 95687460 + Cx3cl1 protein_coding processed_transcript MGP_WSBEiJ_T0088670.1 MGP_WSBEiJ_G0033097.1 mouse_genomes_project 8 95680524 95690933 + MGP_WSBEiJ_P0088670 Cx3cl1 protein_coding protein_coding MGP_WSBEiJ_T0088671.1 MGP_WSBEiJ_G0033097.1 mouse_genomes_project 8 95680719 95688153 + MGP_WSBEiJ_P0088671 Cx3cl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088672.1 MGP_WSBEiJ_G0033097.1 mouse_genomes_project 8 95680740 95688537 + MGP_WSBEiJ_P0088672 Cx3cl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087331.1 MGP_WSBEiJ_G0032694.1 mouse_genomes_project 8 40236904 40259626 - MGP_WSBEiJ_P0087331 Frg1 protein_coding protein_coding MGP_WSBEiJ_T0089241.1 MGP_WSBEiJ_G0033309.1 mouse_genomes_project 8 121989980 121998940 + MGP_WSBEiJ_P0089241 Osgin1 protein_coding protein_coding MGP_WSBEiJ_T0089242.1 MGP_WSBEiJ_G0033309.1 mouse_genomes_project 8 121992978 121998879 + Osgin1 protein_coding processed_transcript MGP_WSBEiJ_T0089243.1 MGP_WSBEiJ_G0033309.1 mouse_genomes_project 8 121993004 122002125 + MGP_WSBEiJ_P0089243 Osgin1 protein_coding protein_coding MGP_WSBEiJ_T0089244.1 MGP_WSBEiJ_G0033309.1 mouse_genomes_project 8 121993023 122002119 + Osgin1 protein_coding retained_intron MGP_WSBEiJ_T0089245.1 MGP_WSBEiJ_G0033309.1 mouse_genomes_project 8 121993045 122000920 + Osgin1 protein_coding retained_intron MGP_WSBEiJ_T0099788.1 MGP_WSBEiJ_G0038451.1 mouse_genomes_project 8 63560519 63560650 + Gm24580 snoRNA snoRNA MGP_WSBEiJ_T0088752.1 MGP_WSBEiJ_G0033124.1 mouse_genomes_project 8 96805253 96830533 - MGP_WSBEiJ_P0088752 Got2 protein_coding protein_coding MGP_WSBEiJ_T0088753.1 MGP_WSBEiJ_G0033124.1 mouse_genomes_project 8 96808702 96814239 - Got2 protein_coding processed_transcript MGP_WSBEiJ_T0010791.1 MGP_WSBEiJ_G0008948.1 mouse_genomes_project 8 72658227 72658352 + Gm26237 miRNA miRNA MGP_WSBEiJ_T0010764.1 MGP_WSBEiJ_G0008921.1 mouse_genomes_project 8 9964283 9964387 + Gm26483 miRNA miRNA MGP_WSBEiJ_T0002288.1 MGP_WSBEiJ_G0002206.1 mouse_genomes_project 8 84549300 84551480 + TEC TEC MGP_WSBEiJ_T0087062.1 MGP_WSBEiJ_G0032606.1 mouse_genomes_project 8 22802418 22862208 - MGP_WSBEiJ_P0087062 Adam5 protein_coding protein_coding MGP_WSBEiJ_T0087063.1 MGP_WSBEiJ_G0032606.1 mouse_genomes_project 8 22802418 22867452 - MGP_WSBEiJ_P0087063 Adam5 protein_coding protein_coding MGP_WSBEiJ_T0087064.1 MGP_WSBEiJ_G0032606.1 mouse_genomes_project 8 22802527 22867378 - Adam5 protein_coding processed_transcript MGP_WSBEiJ_T0087065.1 MGP_WSBEiJ_G0032606.1 mouse_genomes_project 8 22808024 22867762 - MGP_WSBEiJ_P0087065 Adam5 protein_coding protein_coding MGP_WSBEiJ_T0088140.1 MGP_WSBEiJ_G0032934.1 mouse_genomes_project 8 78514318 78517954 - MGP_WSBEiJ_P0088140 Pou4f2 protein_coding protein_coding MGP_WSBEiJ_T0015480.1 MGP_WSBEiJ_G0013610.1 mouse_genomes_project 8 81132113 81133107 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010835.1 MGP_WSBEiJ_G0008992.1 mouse_genomes_project 8 119987851 119987906 - Gm27361 miRNA miRNA MGP_WSBEiJ_T0088464.1 MGP_WSBEiJ_G0033030.1 mouse_genomes_project 8 85821551 85845637 - MGP_WSBEiJ_P0088464 4921524J17Rik protein_coding protein_coding MGP_WSBEiJ_T0088961.1 MGP_WSBEiJ_G0033211.1 mouse_genomes_project 8 108176270 108182614 + MGP_WSBEiJ_P0088961 6030452D12Rik protein_coding protein_coding MGP_WSBEiJ_T0088498.1 MGP_WSBEiJ_G0033038.1 mouse_genomes_project 8 87188901 87189806 + MGP_WSBEiJ_P0088498 Gm10638 protein_coding protein_coding MGP_WSBEiJ_T0087977.1 MGP_WSBEiJ_G0032881.1 mouse_genomes_project 8 71456342 71459501 - MGP_WSBEiJ_P0087977 Bst2 protein_coding protein_coding MGP_WSBEiJ_T0088475.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86282138 86320254 + Phkb protein_coding processed_transcript MGP_WSBEiJ_T0088476.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86282170 86371720 + MGP_WSBEiJ_P0088476 Phkb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088477.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86282181 86504884 + MGP_WSBEiJ_P0088477 Phkb protein_coding protein_coding MGP_WSBEiJ_T0088478.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86282187 86357038 + Phkb protein_coding processed_transcript MGP_WSBEiJ_T0088479.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86282195 86356772 + MGP_WSBEiJ_P0088479 Phkb protein_coding protein_coding MGP_WSBEiJ_T0088480.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86283957 86333155 + MGP_WSBEiJ_P0088480 Phkb protein_coding protein_coding MGP_WSBEiJ_T0088481.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86284221 86320341 + MGP_WSBEiJ_P0088481 Phkb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088482.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86454532 86468580 + MGP_WSBEiJ_P0088482 Phkb protein_coding protein_coding MGP_WSBEiJ_T0088483.1 MGP_WSBEiJ_G0033035.1 mouse_genomes_project 8 86473834 86504149 + Phkb protein_coding processed_transcript MGP_WSBEiJ_T0087707.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69637865 69652953 + MGP_WSBEiJ_P0087707 Gmip protein_coding protein_coding MGP_WSBEiJ_T0087708.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69637876 69650078 + MGP_WSBEiJ_P0087708 Gmip protein_coding protein_coding MGP_WSBEiJ_T0087709.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69639675 69643028 + Gmip protein_coding processed_transcript MGP_WSBEiJ_T0087710.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69639831 69640808 + Gmip protein_coding processed_transcript MGP_WSBEiJ_T0087711.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69642438 69643276 + Gmip protein_coding retained_intron MGP_WSBEiJ_T0087712.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69643059 69645407 + Gmip protein_coding processed_transcript MGP_WSBEiJ_T0087713.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69647814 69648701 + Gmip protein_coding retained_intron MGP_WSBEiJ_T0087714.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69648934 69650083 + MGP_WSBEiJ_P0087714 Gmip protein_coding protein_coding MGP_WSBEiJ_T0087715.1 MGP_WSBEiJ_G0032806.1 mouse_genomes_project 8 69649170 69652411 + Gmip protein_coding processed_transcript MGP_WSBEiJ_T0089533.1 MGP_WSBEiJ_G0033384.1 mouse_genomes_project 8 126279369 126301091 + MGP_WSBEiJ_P0089533 Def8 protein_coding protein_coding MGP_WSBEiJ_T0089534.1 MGP_WSBEiJ_G0033384.1 mouse_genomes_project 8 126279369 126301091 + MGP_WSBEiJ_P0089534 Def8 protein_coding protein_coding MGP_WSBEiJ_T0089535.1 MGP_WSBEiJ_G0033384.1 mouse_genomes_project 8 126279369 126297233 + MGP_WSBEiJ_P0089535 Def8 protein_coding protein_coding MGP_WSBEiJ_T0089536.1 MGP_WSBEiJ_G0033384.1 mouse_genomes_project 8 126279379 126289569 + MGP_WSBEiJ_P0089536 Def8 protein_coding protein_coding MGP_WSBEiJ_T0089537.1 MGP_WSBEiJ_G0033384.1 mouse_genomes_project 8 126279388 126301091 + MGP_WSBEiJ_P0089537 Def8 protein_coding protein_coding MGP_WSBEiJ_T0089538.1 MGP_WSBEiJ_G0033384.1 mouse_genomes_project 8 126279391 126289505 + MGP_WSBEiJ_P0089538 Def8 protein_coding protein_coding MGP_WSBEiJ_T0089539.1 MGP_WSBEiJ_G0033384.1 mouse_genomes_project 8 126279395 126292227 + MGP_WSBEiJ_P0089539 Def8 protein_coding protein_coding MGP_WSBEiJ_T0089540.1 MGP_WSBEiJ_G0033384.1 mouse_genomes_project 8 126279691 126301083 + MGP_WSBEiJ_P0089540 Def8 protein_coding protein_coding MGP_WSBEiJ_T0005324.1 MGP_WSBEiJ_G0004510.1 mouse_genomes_project 8 125493311 125495615 + Gm10612 antisense antisense MGP_WSBEiJ_T0086959.1 MGP_WSBEiJ_G0032569.1 mouse_genomes_project 8 19796303 19805234 - MGP_WSBEiJ_P0086959 protein_coding protein_coding MGP_WSBEiJ_T0086938.1 MGP_WSBEiJ_G0032549.1 mouse_genomes_project 8 16689902 16693656 + MGP_WSBEiJ_P0086938 Defb4 protein_coding protein_coding MGP_WSBEiJ_T0088640.1 MGP_WSBEiJ_G0033086.1 mouse_genomes_project 8 95056711 95057948 + MGP_WSBEiJ_P0088640 Mt1 protein_coding protein_coding MGP_WSBEiJ_T0086568.1 MGP_WSBEiJ_G0032434.1 mouse_genomes_project 8 298413 360552 + Arhgef18 protein_coding retained_intron MGP_WSBEiJ_T0086569.1 MGP_WSBEiJ_G0032434.1 mouse_genomes_project 8 298445 366531 + MGP_WSBEiJ_P0086569 Arhgef18 protein_coding protein_coding MGP_WSBEiJ_T0086570.1 MGP_WSBEiJ_G0032434.1 mouse_genomes_project 8 298480 336914 + Arhgef18 protein_coding processed_transcript MGP_WSBEiJ_T0086571.1 MGP_WSBEiJ_G0032434.1 mouse_genomes_project 8 298480 337282 + MGP_WSBEiJ_P0086571 Arhgef18 protein_coding protein_coding MGP_WSBEiJ_T0086572.1 MGP_WSBEiJ_G0032434.1 mouse_genomes_project 8 345904 366530 + Arhgef18 protein_coding retained_intron MGP_WSBEiJ_T0086573.1 MGP_WSBEiJ_G0032434.1 mouse_genomes_project 8 360669 364177 + Arhgef18 protein_coding retained_intron MGP_WSBEiJ_T0087405.1 MGP_WSBEiJ_G0032714.1 mouse_genomes_project 8 45067460 45188575 - MGP_WSBEiJ_P0087405 Snx25 protein_coding protein_coding MGP_WSBEiJ_T0087406.1 MGP_WSBEiJ_G0032714.1 mouse_genomes_project 8 45067475 45154308 - Snx25 protein_coding retained_intron MGP_WSBEiJ_T0087407.1 MGP_WSBEiJ_G0032714.1 mouse_genomes_project 8 45067656 45112559 - MGP_WSBEiJ_P0087407 Snx25 protein_coding protein_coding MGP_WSBEiJ_T0087408.1 MGP_WSBEiJ_G0032714.1 mouse_genomes_project 8 45083556 45090591 - Snx25 protein_coding processed_transcript MGP_WSBEiJ_T0087409.1 MGP_WSBEiJ_G0032714.1 mouse_genomes_project 8 45090214 45161724 - MGP_WSBEiJ_P0087409 Snx25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087410.1 MGP_WSBEiJ_G0032714.1 mouse_genomes_project 8 45090258 45123216 - Snx25 protein_coding processed_transcript MGP_WSBEiJ_T0087411.1 MGP_WSBEiJ_G0032714.1 mouse_genomes_project 8 45112116 45141321 - Snx25 protein_coding retained_intron MGP_WSBEiJ_T0015430.1 MGP_WSBEiJ_G0013560.1 mouse_genomes_project 8 903984 911480 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088850.1 MGP_WSBEiJ_G0033167.1 mouse_genomes_project 8 106902737 106915536 - MGP_WSBEiJ_P0088850 protein_coding protein_coding MGP_WSBEiJ_T0089452.1 MGP_WSBEiJ_G0033364.1 mouse_genomes_project 8 125423529 125494563 - MGP_WSBEiJ_P0089452 Cbfa2t3 protein_coding protein_coding MGP_WSBEiJ_T0089453.1 MGP_WSBEiJ_G0033364.1 mouse_genomes_project 8 125424254 125472245 - MGP_WSBEiJ_P0089453 Cbfa2t3 protein_coding protein_coding MGP_WSBEiJ_T0089454.1 MGP_WSBEiJ_G0033364.1 mouse_genomes_project 8 125424728 125472348 - MGP_WSBEiJ_P0089454 Cbfa2t3 protein_coding protein_coding MGP_WSBEiJ_T0089455.1 MGP_WSBEiJ_G0033364.1 mouse_genomes_project 8 125433254 125472867 - MGP_WSBEiJ_P0089455 Cbfa2t3 protein_coding protein_coding MGP_WSBEiJ_T0089456.1 MGP_WSBEiJ_G0033364.1 mouse_genomes_project 8 125433258 125440685 - Cbfa2t3 protein_coding processed_transcript MGP_WSBEiJ_T0089457.1 MGP_WSBEiJ_G0033364.1 mouse_genomes_project 8 125437244 125472284 - Cbfa2t3 protein_coding processed_transcript MGP_WSBEiJ_T0089458.1 MGP_WSBEiJ_G0033364.1 mouse_genomes_project 8 125444247 125494356 - Cbfa2t3 protein_coding retained_intron MGP_WSBEiJ_T0087434.1 MGP_WSBEiJ_G0032720.1 mouse_genomes_project 8 45630182 45675259 - MGP_WSBEiJ_P0087434 Primpol protein_coding protein_coding MGP_WSBEiJ_T0087435.1 MGP_WSBEiJ_G0032720.1 mouse_genomes_project 8 45630765 45675259 - Primpol protein_coding retained_intron MGP_WSBEiJ_T0087436.1 MGP_WSBEiJ_G0032720.1 mouse_genomes_project 8 45641254 45650697 - Primpol protein_coding processed_transcript MGP_WSBEiJ_T0087437.1 MGP_WSBEiJ_G0032720.1 mouse_genomes_project 8 45663221 45671074 - MGP_WSBEiJ_P0087437 Primpol protein_coding protein_coding MGP_WSBEiJ_T0087438.1 MGP_WSBEiJ_G0032720.1 mouse_genomes_project 8 45668844 45675271 - Primpol protein_coding retained_intron MGP_WSBEiJ_T0008941.1 MGP_WSBEiJ_G0007197.1 mouse_genomes_project 8 32493261 32499624 + Gm9951 lincRNA lincRNA MGP_WSBEiJ_T0008942.1 MGP_WSBEiJ_G0007197.1 mouse_genomes_project 8 32498405 32500829 + Gm9951 lincRNA lincRNA MGP_WSBEiJ_T0010788.1 MGP_WSBEiJ_G0008945.1 mouse_genomes_project 8 70837430 70837524 + Mir1969 miRNA miRNA MGP_WSBEiJ_T0087615.1 MGP_WSBEiJ_G0032777.1 mouse_genomes_project 8 64742242 64761965 - MGP_WSBEiJ_P0087615 Trim60 protein_coding protein_coding MGP_WSBEiJ_T0010841.1 MGP_WSBEiJ_G0008998.1 mouse_genomes_project 8 125925727 125925796 + Mir7079 miRNA miRNA MGP_WSBEiJ_T0010827.1 MGP_WSBEiJ_G0008984.1 mouse_genomes_project 8 112488333 112488414 - Gm44489 miRNA miRNA MGP_WSBEiJ_T0088661.1 MGP_WSBEiJ_G0033093.1 mouse_genomes_project 8 95507442 95563807 + MGP_WSBEiJ_P0088661 Rspry1 protein_coding protein_coding MGP_WSBEiJ_T0088662.1 MGP_WSBEiJ_G0033093.1 mouse_genomes_project 8 95507465 95527901 + MGP_WSBEiJ_P0088662 Rspry1 protein_coding protein_coding MGP_WSBEiJ_T0088663.1 MGP_WSBEiJ_G0033093.1 mouse_genomes_project 8 95531018 95534596 + Rspry1 protein_coding retained_intron MGP_WSBEiJ_T0088667.1 MGP_WSBEiJ_G0033096.1 mouse_genomes_project 8 95653497 95659584 + MGP_WSBEiJ_P0088667 Ccl22 protein_coding protein_coding MGP_WSBEiJ_T0088668.1 MGP_WSBEiJ_G0033096.1 mouse_genomes_project 8 95653587 95657758 + Ccl22 protein_coding processed_transcript MGP_WSBEiJ_T0088028.1 MGP_WSBEiJ_G0032895.1 mouse_genomes_project 8 71866072 71873746 + MGP_WSBEiJ_P0088028 Zfp882 protein_coding protein_coding MGP_WSBEiJ_T0088030.1 MGP_WSBEiJ_G0032895.1 mouse_genomes_project 8 71866121 71871039 + MGP_WSBEiJ_P0088030 Zfp882 protein_coding protein_coding MGP_WSBEiJ_T0088031.1 MGP_WSBEiJ_G0032895.1 mouse_genomes_project 8 71866369 71871043 + MGP_WSBEiJ_P0088031 Zfp882 protein_coding protein_coding MGP_WSBEiJ_T0089099.1 MGP_WSBEiJ_G0033259.1 mouse_genomes_project 8 112932020 112953013 - MGP_WSBEiJ_P0089099 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089100.1 MGP_WSBEiJ_G0033259.1 mouse_genomes_project 8 112932068 112953060 - protein_coding retained_intron MGP_WSBEiJ_T0089222.1 MGP_WSBEiJ_G0033300.1 mouse_genomes_project 8 119566087 119614265 + MGP_WSBEiJ_P0089222 Gan protein_coding protein_coding MGP_WSBEiJ_T0087948.1 MGP_WSBEiJ_G0032873.1 mouse_genomes_project 8 71318547 71322425 + MGP_WSBEiJ_P0087948 Ankle1 protein_coding protein_coding MGP_WSBEiJ_T0087949.1 MGP_WSBEiJ_G0032873.1 mouse_genomes_project 8 71318553 71322389 + Ankle1 protein_coding retained_intron MGP_WSBEiJ_T0087950.1 MGP_WSBEiJ_G0032873.1 mouse_genomes_project 8 71318559 71322016 + Ankle1 protein_coding retained_intron MGP_WSBEiJ_T0087951.1 MGP_WSBEiJ_G0032873.1 mouse_genomes_project 8 71318561 71322023 + MGP_WSBEiJ_P0087951 Ankle1 protein_coding protein_coding MGP_WSBEiJ_T0087952.1 MGP_WSBEiJ_G0032873.1 mouse_genomes_project 8 71320228 71321695 + Ankle1 protein_coding retained_intron MGP_WSBEiJ_T0099806.1 MGP_WSBEiJ_G0038469.1 mouse_genomes_project 8 96691389 96691522 - Gm26265 snoRNA snoRNA MGP_WSBEiJ_T0015477.1 MGP_WSBEiJ_G0013607.1 mouse_genomes_project 8 79687620 79688595 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088094.1 MGP_WSBEiJ_G0032921.1 mouse_genomes_project 8 74829049 74850798 + MGP_WSBEiJ_P0088094 Isx protein_coding protein_coding MGP_WSBEiJ_T0088095.1 MGP_WSBEiJ_G0032921.1 mouse_genomes_project 8 74829416 74850439 + MGP_WSBEiJ_P0088095 Isx protein_coding protein_coding MGP_WSBEiJ_T0005284.1 MGP_WSBEiJ_G0004476.1 mouse_genomes_project 8 66214270 66217700 - Gm15356 antisense antisense MGP_WSBEiJ_T0088960.1 MGP_WSBEiJ_G0033210.1 mouse_genomes_project 8 108104958 108115438 + MGP_WSBEiJ_P0088960 Zfp90 protein_coding protein_coding MGP_WSBEiJ_T0088816.1 MGP_WSBEiJ_G0033155.1 mouse_genomes_project 8 106703637 106724782 + MGP_WSBEiJ_P0088816 Ces4a protein_coding protein_coding MGP_WSBEiJ_T0087540.1 MGP_WSBEiJ_G0032757.1 mouse_genomes_project 8 58434783 58437330 + MGP_WSBEiJ_P0087540 BC030500 protein_coding protein_coding MGP_WSBEiJ_T0087541.1 MGP_WSBEiJ_G0032757.1 mouse_genomes_project 8 58435285 58436225 + MGP_WSBEiJ_P0087541 BC030500 protein_coding protein_coding MGP_WSBEiJ_T0101126.1 MGP_WSBEiJ_G0039583.1 mouse_genomes_project 8 19593071 19593897 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005274.1 MGP_WSBEiJ_G0004467.1 mouse_genomes_project 8 44728376 44831115 - Sorbs2os antisense antisense MGP_WSBEiJ_T0015429.1 MGP_WSBEiJ_G0013559.1 mouse_genomes_project 8 771565 771865 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088026.1 MGP_WSBEiJ_G0032894.1 mouse_genomes_project 8 71824638 71833638 + MGP_WSBEiJ_P0088026 Zfp709 protein_coding protein_coding MGP_WSBEiJ_T0088027.1 MGP_WSBEiJ_G0032894.1 mouse_genomes_project 8 71824983 71825350 + Zfp709 protein_coding processed_transcript MGP_WSBEiJ_T0089579.1 MGP_WSBEiJ_G0033400.1 mouse_genomes_project 8 127431586 127444652 - MGP_WSBEiJ_P0089579 Agt protein_coding protein_coding MGP_WSBEiJ_T0089304.1 MGP_WSBEiJ_G0033328.1 mouse_genomes_project 8 122846561 123198634 + MGP_WSBEiJ_P0089304 Gse1 protein_coding protein_coding MGP_WSBEiJ_T0089305.1 MGP_WSBEiJ_G0033328.1 mouse_genomes_project 8 123121546 123226781 + MGP_WSBEiJ_P0089305 Gse1 protein_coding protein_coding MGP_WSBEiJ_T0089306.1 MGP_WSBEiJ_G0033328.1 mouse_genomes_project 8 123180897 123224871 + MGP_WSBEiJ_P0089306 Gse1 protein_coding protein_coding MGP_WSBEiJ_T0089307.1 MGP_WSBEiJ_G0033328.1 mouse_genomes_project 8 123182469 123224717 + MGP_WSBEiJ_P0089307 Gse1 protein_coding protein_coding MGP_WSBEiJ_T0089308.1 MGP_WSBEiJ_G0033328.1 mouse_genomes_project 8 123216676 123218667 + Gse1 protein_coding retained_intron MGP_WSBEiJ_T0089309.1 MGP_WSBEiJ_G0033328.1 mouse_genomes_project 8 123216724 123220605 + Gse1 protein_coding processed_transcript MGP_WSBEiJ_T0088978.1 MGP_WSBEiJ_G0033219.1 mouse_genomes_project 8 108766677 108782370 + MGP_WSBEiJ_P0088978 Vps4a protein_coding protein_coding MGP_WSBEiJ_T0088979.1 MGP_WSBEiJ_G0033219.1 mouse_genomes_project 8 108775716 108779302 + Vps4a protein_coding retained_intron MGP_WSBEiJ_T0088980.1 MGP_WSBEiJ_G0033219.1 mouse_genomes_project 8 108778869 108779721 + Vps4a protein_coding retained_intron MGP_WSBEiJ_T0005309.1 MGP_WSBEiJ_G0004496.1 mouse_genomes_project 8 112689443 112694373 + Gm15894 antisense antisense MGP_WSBEiJ_T0098534.1 MGP_WSBEiJ_G0037197.1 mouse_genomes_project 8 36056581 36056683 - Gm25126 snRNA snRNA MGP_WSBEiJ_T0015455.1 MGP_WSBEiJ_G0013585.1 mouse_genomes_project 8 32796978 32798131 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010792.1 MGP_WSBEiJ_G0008949.1 mouse_genomes_project 8 72973805 72973885 + Mir28b miRNA miRNA MGP_WSBEiJ_T0087189.1 MGP_WSBEiJ_G0032651.1 mouse_genomes_project 8 31634792 31798964 - MGP_WSBEiJ_P0087189 Wrn protein_coding protein_coding MGP_WSBEiJ_T0087190.1 MGP_WSBEiJ_G0032651.1 mouse_genomes_project 8 31634792 31798964 - MGP_WSBEiJ_P0087190 Wrn protein_coding protein_coding MGP_WSBEiJ_T0089186.1 MGP_WSBEiJ_G0033287.1 mouse_genomes_project 8 116418051 116446196 + Vat1l protein_coding processed_transcript MGP_WSBEiJ_T0089187.1 MGP_WSBEiJ_G0033287.1 mouse_genomes_project 8 116418069 116597240 + MGP_WSBEiJ_P0089187 Vat1l protein_coding protein_coding MGP_WSBEiJ_T0089188.1 MGP_WSBEiJ_G0033287.1 mouse_genomes_project 8 116418073 116446190 + MGP_WSBEiJ_P0089188 Vat1l protein_coding protein_coding MGP_WSBEiJ_T0089189.1 MGP_WSBEiJ_G0033287.1 mouse_genomes_project 8 116591284 116597239 + Vat1l protein_coding retained_intron MGP_WSBEiJ_T0087235.1 MGP_WSBEiJ_G0032663.1 mouse_genomes_project 8 32603927 32615393 - MGP_WSBEiJ_P0087235 Leprotl1 protein_coding protein_coding MGP_WSBEiJ_T0089210.1 MGP_WSBEiJ_G0033294.1 mouse_genomes_project 8 119314837 119334601 + MGP_WSBEiJ_P0089210 Cenpn protein_coding protein_coding MGP_WSBEiJ_T0010797.1 MGP_WSBEiJ_G0008954.1 mouse_genomes_project 8 84344541 84344678 + Mir8111 miRNA miRNA MGP_WSBEiJ_T0099784.1 MGP_WSBEiJ_G0038447.1 mouse_genomes_project 8 56984015 56984129 + Gm25379 snoRNA snoRNA MGP_WSBEiJ_T0087136.1 MGP_WSBEiJ_G0032625.1 mouse_genomes_project 8 24100470 24117669 - MGP_WSBEiJ_P0087136 Pomk protein_coding protein_coding MGP_WSBEiJ_T0099815.1 MGP_WSBEiJ_G0038478.1 mouse_genomes_project 8 115697177 115697308 - Gm25766 snoRNA snoRNA MGP_WSBEiJ_T0088951.1 MGP_WSBEiJ_G0033207.1 mouse_genomes_project 8 107875108 107886485 - MGP_WSBEiJ_P0088951 Slc7a6os protein_coding protein_coding MGP_WSBEiJ_T0088179.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 81553370 81984104 + MGP_WSBEiJ_P0088179 Inpp4b protein_coding protein_coding MGP_WSBEiJ_T0088180.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 81553372 82320048 + MGP_WSBEiJ_P0088180 Inpp4b protein_coding protein_coding MGP_WSBEiJ_T0088181.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 81553376 82379164 + MGP_WSBEiJ_P0088181 Inpp4b protein_coding protein_coding MGP_WSBEiJ_T0088182.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 81553376 82381648 + MGP_WSBEiJ_P0088182 Inpp4b protein_coding protein_coding MGP_WSBEiJ_T0088183.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 81553376 82379396 + MGP_WSBEiJ_P0088183 Inpp4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088184.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 81948703 82258481 + MGP_WSBEiJ_P0088184 Inpp4b protein_coding unknown_likely_coding MGP_WSBEiJ_T0088185.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 81953262 82379169 + MGP_WSBEiJ_P0088185 Inpp4b protein_coding protein_coding MGP_WSBEiJ_T0088186.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 82008086 82057442 + Inpp4b protein_coding processed_transcript MGP_WSBEiJ_T0088187.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 82011076 82133735 + Inpp4b protein_coding processed_transcript MGP_WSBEiJ_T0088188.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 82017082 82320048 + MGP_WSBEiJ_P0088188 Inpp4b protein_coding protein_coding MGP_WSBEiJ_T0088189.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 82091105 82198001 + Inpp4b protein_coding processed_transcript MGP_WSBEiJ_T0088190.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 82106086 82379178 + MGP_WSBEiJ_P0088190 Inpp4b protein_coding protein_coding MGP_WSBEiJ_T0088191.1 MGP_WSBEiJ_G0032951.1 mouse_genomes_project 8 82141705 82153808 + Inpp4b protein_coding processed_transcript MGP_WSBEiJ_T0002285.1 MGP_WSBEiJ_G0002203.1 mouse_genomes_project 8 21192710 21193561 + TEC TEC MGP_WSBEiJ_T0087827.1 MGP_WSBEiJ_G0032834.1 mouse_genomes_project 8 70320827 70349401 - MGP_WSBEiJ_P0087827 Klhl26 protein_coding protein_coding MGP_WSBEiJ_T0087828.1 MGP_WSBEiJ_G0032834.1 mouse_genomes_project 8 70320827 70349401 - MGP_WSBEiJ_P0087828 Klhl26 protein_coding protein_coding MGP_WSBEiJ_T0015448.1 MGP_WSBEiJ_G0013578.1 mouse_genomes_project 8 18723167 18724269 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015435.1 MGP_WSBEiJ_G0013565.1 mouse_genomes_project 8 2065760 2066175 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089314.1 MGP_WSBEiJ_G0033330.1 mouse_genomes_project 8 123255278 123285710 - MGP_WSBEiJ_P0089314 1190005I06Rik protein_coding protein_coding MGP_WSBEiJ_T0089316.1 MGP_WSBEiJ_G0033330.1 mouse_genomes_project 8 123255477 123301029 - MGP_WSBEiJ_P0089316 1190005I06Rik protein_coding protein_coding MGP_WSBEiJ_T0089317.1 MGP_WSBEiJ_G0033330.1 mouse_genomes_project 8 123255611 123285581 - MGP_WSBEiJ_P0089317 1190005I06Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009032.1 MGP_WSBEiJ_G0007264.1 mouse_genomes_project 8 122709322 122711647 + A130014A01Rik lincRNA lincRNA MGP_WSBEiJ_T0086988.1 MGP_WSBEiJ_G0032583.1 mouse_genomes_project 8 20353773 20373978 + MGP_WSBEiJ_P0086988 Mrps31 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087496.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54017769 54109773 - MGP_WSBEiJ_P0087496 Wdr17 protein_coding protein_coding MGP_WSBEiJ_T0087497.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54017947 54115486 - MGP_WSBEiJ_P0087497 Wdr17 protein_coding protein_coding MGP_WSBEiJ_T0087498.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54018327 54038767 - Wdr17 protein_coding retained_intron MGP_WSBEiJ_T0087499.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54018336 54115466 - MGP_WSBEiJ_P0087499 Wdr17 protein_coding protein_coding MGP_WSBEiJ_T0087500.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54018506 54115462 - MGP_WSBEiJ_P0087500 Wdr17 protein_coding protein_coding MGP_WSBEiJ_T0087501.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54039373 54044784 - Wdr17 protein_coding retained_intron MGP_WSBEiJ_T0087502.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54057052 54084498 - MGP_WSBEiJ_P0087502 Wdr17 protein_coding protein_coding MGP_WSBEiJ_T0087503.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54057096 54115448 - Wdr17 protein_coding processed_transcript MGP_WSBEiJ_T0087504.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54081788 54115446 - MGP_WSBEiJ_P0087504 Wdr17 protein_coding protein_coding MGP_WSBEiJ_T0087505.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54082120 54115572 - Wdr17 protein_coding processed_transcript MGP_WSBEiJ_T0087506.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54088457 54274070 - MGP_WSBEiJ_P0087506 Wdr17 protein_coding protein_coding MGP_WSBEiJ_T0087507.1 MGP_WSBEiJ_G0032744.1 mouse_genomes_project 8 54091318 54101877 - MGP_WSBEiJ_P0087507 Wdr17 protein_coding protein_coding MGP_WSBEiJ_T0089638.1 MGP_WSBEiJ_G0033422.1 mouse_genomes_project 8 129402681 129405599 + MGP_WSBEiJ_P0089638 Coa6 protein_coding protein_coding MGP_WSBEiJ_T0089161.1 MGP_WSBEiJ_G0033277.1 mouse_genomes_project 8 113967824 113992360 - MGP_WSBEiJ_P0089161 Tmem231 protein_coding protein_coding MGP_WSBEiJ_T0015479.1 MGP_WSBEiJ_G0013609.1 mouse_genomes_project 8 80284034 80285547 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087412.1 MGP_WSBEiJ_G0032715.1 mouse_genomes_project 8 45188189 45209152 + MGP_WSBEiJ_P0087412 protein_coding protein_coding MGP_WSBEiJ_T0087413.1 MGP_WSBEiJ_G0032715.1 mouse_genomes_project 8 45200058 45234698 + MGP_WSBEiJ_P0087413 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087414.1 MGP_WSBEiJ_G0032715.1 mouse_genomes_project 8 45200106 45209246 + protein_coding processed_transcript MGP_WSBEiJ_T0087415.1 MGP_WSBEiJ_G0032715.1 mouse_genomes_project 8 45200129 45209152 + MGP_WSBEiJ_P0087415 protein_coding protein_coding MGP_WSBEiJ_T0088967.1 MGP_WSBEiJ_G0033215.1 mouse_genomes_project 8 108581637 108594373 + MGP_WSBEiJ_P0088967 Has3 protein_coding protein_coding MGP_WSBEiJ_T0088968.1 MGP_WSBEiJ_G0033215.1 mouse_genomes_project 8 108582231 108592612 + MGP_WSBEiJ_P0088968 Has3 protein_coding protein_coding MGP_WSBEiJ_T0088969.1 MGP_WSBEiJ_G0033215.1 mouse_genomes_project 8 108582286 108595916 + MGP_WSBEiJ_P0088969 Has3 protein_coding protein_coding MGP_WSBEiJ_T0087875.1 MGP_WSBEiJ_G0032847.1 mouse_genomes_project 8 70559866 70565378 + MGP_WSBEiJ_P0087875 Lsm4 protein_coding protein_coding MGP_WSBEiJ_T0087876.1 MGP_WSBEiJ_G0032847.1 mouse_genomes_project 8 70560050 70564674 + MGP_WSBEiJ_P0087876 Lsm4 protein_coding protein_coding MGP_WSBEiJ_T0087877.1 MGP_WSBEiJ_G0032847.1 mouse_genomes_project 8 70564290 70564742 + Lsm4 protein_coding retained_intron MGP_WSBEiJ_T0089300.1 MGP_WSBEiJ_G0033327.1 mouse_genomes_project 8 122780677 122791317 - MGP_WSBEiJ_P0089300 Fam92b protein_coding protein_coding MGP_WSBEiJ_T0089301.1 MGP_WSBEiJ_G0033327.1 mouse_genomes_project 8 122781666 122791214 - Fam92b protein_coding retained_intron MGP_WSBEiJ_T0089302.1 MGP_WSBEiJ_G0033327.1 mouse_genomes_project 8 122785909 122791278 - MGP_WSBEiJ_P0089302 Fam92b protein_coding protein_coding MGP_WSBEiJ_T0089303.1 MGP_WSBEiJ_G0033327.1 mouse_genomes_project 8 122788575 122791298 - Fam92b protein_coding retained_intron MGP_WSBEiJ_T0089451.1 MGP_WSBEiJ_G0033363.1 mouse_genomes_project 8 125414200 125417465 - MGP_WSBEiJ_P0089451 Pabpn1l protein_coding protein_coding MGP_WSBEiJ_T0088432.1 MGP_WSBEiJ_G0033021.1 mouse_genomes_project 8 85493326 85496601 + MGP_WSBEiJ_P0088432 Dhps protein_coding protein_coding MGP_WSBEiJ_T0088433.1 MGP_WSBEiJ_G0033021.1 mouse_genomes_project 8 85493365 85496595 + MGP_WSBEiJ_P0088433 Dhps protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088434.1 MGP_WSBEiJ_G0033021.1 mouse_genomes_project 8 85493375 85494380 + Dhps protein_coding retained_intron MGP_WSBEiJ_T0088435.1 MGP_WSBEiJ_G0033021.1 mouse_genomes_project 8 85493870 85495017 + Dhps protein_coding retained_intron MGP_WSBEiJ_T0088436.1 MGP_WSBEiJ_G0033021.1 mouse_genomes_project 8 85494489 85495449 + Dhps protein_coding retained_intron MGP_WSBEiJ_T0088437.1 MGP_WSBEiJ_G0033021.1 mouse_genomes_project 8 85494489 85496590 + Dhps protein_coding retained_intron MGP_WSBEiJ_T0088438.1 MGP_WSBEiJ_G0033021.1 mouse_genomes_project 8 85495016 85495887 + Dhps protein_coding retained_intron MGP_WSBEiJ_T0088439.1 MGP_WSBEiJ_G0033021.1 mouse_genomes_project 8 85496137 85496590 + Dhps protein_coding retained_intron MGP_WSBEiJ_T0087616.1 MGP_WSBEiJ_G0032778.1 mouse_genomes_project 8 64756385 64761965 - MGP_WSBEiJ_P0087616 protein_coding protein_coding MGP_WSBEiJ_T0087617.1 MGP_WSBEiJ_G0032778.1 mouse_genomes_project 8 64758326 64781204 - protein_coding processed_transcript MGP_WSBEiJ_T0087618.1 MGP_WSBEiJ_G0032778.1 mouse_genomes_project 8 64771891 64781280 - MGP_WSBEiJ_P0087618 protein_coding protein_coding MGP_WSBEiJ_T0087619.1 MGP_WSBEiJ_G0032778.1 mouse_genomes_project 8 64771891 64781437 - MGP_WSBEiJ_P0087619 protein_coding protein_coding MGP_WSBEiJ_T0099789.1 MGP_WSBEiJ_G0038452.1 mouse_genomes_project 8 65629520 65629655 + Gm26123 snoRNA snoRNA MGP_WSBEiJ_T0099794.1 MGP_WSBEiJ_G0038457.1 mouse_genomes_project 8 70806932 70807063 - Snora68 snoRNA snoRNA MGP_WSBEiJ_T0088067.1 MGP_WSBEiJ_G0032909.1 mouse_genomes_project 8 72316076 72403221 - MGP_WSBEiJ_P0088067 Eps15l1 protein_coding protein_coding MGP_WSBEiJ_T0086872.1 MGP_WSBEiJ_G0032526.1 mouse_genomes_project 8 11459708 11461838 + MGP_WSBEiJ_P0086872 protein_coding protein_coding MGP_WSBEiJ_T0086710.1 MGP_WSBEiJ_G0032474.1 mouse_genomes_project 8 5734057 5780018 - MGP_WSBEiJ_P0086710 Efnb2 protein_coding protein_coding MGP_WSBEiJ_T0086711.1 MGP_WSBEiJ_G0032474.1 mouse_genomes_project 8 5737220 5757405 - MGP_WSBEiJ_P0086711 Efnb2 protein_coding protein_coding MGP_WSBEiJ_T0087747.1 MGP_WSBEiJ_G0032818.1 mouse_genomes_project 8 69941361 69968851 - MGP_WSBEiJ_P0087747 Ncan protein_coding protein_coding MGP_WSBEiJ_T0088178.1 MGP_WSBEiJ_G0032950.1 mouse_genomes_project 8 81181534 81216175 - MGP_WSBEiJ_P0088178 Usp38 protein_coding protein_coding MGP_WSBEiJ_T0088729.1 MGP_WSBEiJ_G0033116.1 mouse_genomes_project 8 96361482 96404905 - MGP_WSBEiJ_P0088729 Csnk2a2 protein_coding protein_coding MGP_WSBEiJ_T0088594.1 MGP_WSBEiJ_G0033072.1 mouse_genomes_project 8 93912329 93945677 - MGP_WSBEiJ_P0088594 Ces1d protein_coding protein_coding MGP_WSBEiJ_T0088595.1 MGP_WSBEiJ_G0033072.1 mouse_genomes_project 8 93912564 93916230 - Ces1d protein_coding processed_transcript MGP_WSBEiJ_T0088596.1 MGP_WSBEiJ_G0033072.1 mouse_genomes_project 8 93912590 93921530 - Ces1d protein_coding processed_transcript MGP_WSBEiJ_T0088597.1 MGP_WSBEiJ_G0033072.1 mouse_genomes_project 8 93942636 93945616 - Ces1d protein_coding processed_transcript MGP_WSBEiJ_T0005319.1 MGP_WSBEiJ_G0004506.1 mouse_genomes_project 8 124288699 124290059 + Gm27045 antisense antisense MGP_WSBEiJ_T0087009.1 MGP_WSBEiJ_G0032590.1 mouse_genomes_project 8 20708788 20737942 + MGP_WSBEiJ_P0087009 Plat protein_coding protein_coding MGP_WSBEiJ_T0086752.1 MGP_WSBEiJ_G0032492.1 mouse_genomes_project 8 9086664 9103612 + MGP_WSBEiJ_P0086752 Tex29 protein_coding protein_coding MGP_WSBEiJ_T0086753.1 MGP_WSBEiJ_G0032492.1 mouse_genomes_project 8 9086801 9090295 + Tex29 protein_coding processed_transcript MGP_WSBEiJ_T0086754.1 MGP_WSBEiJ_G0032492.1 mouse_genomes_project 8 9087109 9103556 + MGP_WSBEiJ_P0086754 Tex29 protein_coding protein_coding MGP_WSBEiJ_T0086755.1 MGP_WSBEiJ_G0032492.1 mouse_genomes_project 8 9088235 9103608 + Tex29 protein_coding processed_transcript MGP_WSBEiJ_T0099773.1 MGP_WSBEiJ_G0038436.1 mouse_genomes_project 8 23743066 23743196 + Gm24992 snoRNA snoRNA MGP_WSBEiJ_T0089093.1 MGP_WSBEiJ_G0033257.1 mouse_genomes_project 8 112825743 112846927 - MGP_WSBEiJ_P0089093 Fuk protein_coding protein_coding MGP_WSBEiJ_T0005321.1 MGP_WSBEiJ_G0004508.1 mouse_genomes_project 8 124671602 124683409 + BC048644 antisense antisense MGP_WSBEiJ_T0005322.1 MGP_WSBEiJ_G0004508.1 mouse_genomes_project 8 124671602 124673594 + BC048644 antisense antisense MGP_WSBEiJ_T0010808.1 MGP_WSBEiJ_G0008965.1 mouse_genomes_project 8 85482653 85482740 + Mir7070 miRNA miRNA MGP_WSBEiJ_T0087802.1 MGP_WSBEiJ_G0032828.1 mouse_genomes_project 8 70157319 70168149 - MGP_WSBEiJ_P0087802 Ddx49 protein_coding protein_coding MGP_WSBEiJ_T0087803.1 MGP_WSBEiJ_G0032828.1 mouse_genomes_project 8 70157330 70168112 - Ddx49 protein_coding retained_intron MGP_WSBEiJ_T0087804.1 MGP_WSBEiJ_G0032828.1 mouse_genomes_project 8 70158037 70160188 - Ddx49 protein_coding retained_intron MGP_WSBEiJ_T0087805.1 MGP_WSBEiJ_G0032828.1 mouse_genomes_project 8 70159248 70168133 - MGP_WSBEiJ_P0087805 Ddx49 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087806.1 MGP_WSBEiJ_G0032828.1 mouse_genomes_project 8 70160270 70168123 - Ddx49 protein_coding retained_intron MGP_WSBEiJ_T0087807.1 MGP_WSBEiJ_G0032828.1 mouse_genomes_project 8 70166580 70168094 - Ddx49 protein_coding retained_intron MGP_WSBEiJ_T0087494.1 MGP_WSBEiJ_G0032742.1 mouse_genomes_project 8 53939224 53982665 + MGP_WSBEiJ_P0087494 Asb5 protein_coding protein_coding MGP_WSBEiJ_T0098528.1 MGP_WSBEiJ_G0037191.1 mouse_genomes_project 8 20778227 20778345 - Gm24735 snRNA snRNA MGP_WSBEiJ_T0087611.1 MGP_WSBEiJ_G0032774.1 mouse_genomes_project 8 64477221 64585403 - MGP_WSBEiJ_P0087611 Klhl2 protein_coding protein_coding MGP_WSBEiJ_T0099795.1 MGP_WSBEiJ_G0038458.1 mouse_genomes_project 8 73132705 73132845 - Gm22532 snoRNA snoRNA MGP_WSBEiJ_T0087125.1 MGP_WSBEiJ_G0032621.1 mouse_genomes_project 8 23928306 23935817 + MGP_WSBEiJ_P0087125 Star protein_coding protein_coding MGP_WSBEiJ_T0015460.1 MGP_WSBEiJ_G0013590.1 mouse_genomes_project 8 40933670 40935320 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010789.1 MGP_WSBEiJ_G0008946.1 mouse_genomes_project 8 71559602 71559662 - Mir6769b miRNA miRNA MGP_WSBEiJ_T0089041.1 MGP_WSBEiJ_G0033237.1 mouse_genomes_project 8 111472088 111533680 + MGP_WSBEiJ_P0089041 Pkd1l3 protein_coding protein_coding MGP_WSBEiJ_T0089042.1 MGP_WSBEiJ_G0033237.1 mouse_genomes_project 8 111472088 111531806 + MGP_WSBEiJ_P0089042 Pkd1l3 protein_coding protein_coding MGP_WSBEiJ_T0088553.1 MGP_WSBEiJ_G0033058.1 mouse_genomes_project 8 91732684 91791174 + MGP_WSBEiJ_P0088553 Rbl2 protein_coding protein_coding MGP_WSBEiJ_T0088554.1 MGP_WSBEiJ_G0033058.1 mouse_genomes_project 8 91732721 91742598 + Rbl2 protein_coding retained_intron MGP_WSBEiJ_T0088555.1 MGP_WSBEiJ_G0033058.1 mouse_genomes_project 8 91770555 91780404 + Rbl2 protein_coding retained_intron MGP_WSBEiJ_T0088556.1 MGP_WSBEiJ_G0033058.1 mouse_genomes_project 8 91770592 91779350 + Rbl2 protein_coding processed_transcript MGP_WSBEiJ_T0088558.1 MGP_WSBEiJ_G0033058.1 mouse_genomes_project 8 91777536 91781144 + Rbl2 protein_coding retained_intron MGP_WSBEiJ_T0088559.1 MGP_WSBEiJ_G0033058.1 mouse_genomes_project 8 91778955 91781084 + Rbl2 protein_coding retained_intron MGP_WSBEiJ_T0088560.1 MGP_WSBEiJ_G0033058.1 mouse_genomes_project 8 91780428 91781406 + Rbl2 protein_coding retained_intron MGP_WSBEiJ_T0098561.1 MGP_WSBEiJ_G0037224.1 mouse_genomes_project 8 106025843 106025950 + Gm22148 snRNA snRNA MGP_WSBEiJ_T0088885.1 MGP_WSBEiJ_G0033180.1 mouse_genomes_project 8 107252356 107302402 + Ctcf protein_coding processed_transcript MGP_WSBEiJ_T0088886.1 MGP_WSBEiJ_G0033180.1 mouse_genomes_project 8 107252367 107303677 + MGP_WSBEiJ_P0088886 Ctcf protein_coding protein_coding MGP_WSBEiJ_T0088887.1 MGP_WSBEiJ_G0033180.1 mouse_genomes_project 8 107252757 107283298 + Ctcf protein_coding processed_transcript MGP_WSBEiJ_T0088888.1 MGP_WSBEiJ_G0033180.1 mouse_genomes_project 8 107252888 107283015 + Ctcf protein_coding processed_transcript MGP_WSBEiJ_T0088889.1 MGP_WSBEiJ_G0033180.1 mouse_genomes_project 8 107295957 107301372 + Ctcf protein_coding retained_intron MGP_WSBEiJ_T0088890.1 MGP_WSBEiJ_G0033180.1 mouse_genomes_project 8 107295957 107300297 + Ctcf protein_coding processed_transcript MGP_WSBEiJ_T0015463.1 MGP_WSBEiJ_G0013593.1 mouse_genomes_project 8 60669729 60670917 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010769.1 MGP_WSBEiJ_G0008926.1 mouse_genomes_project 8 11728279 11728387 + Gm44347 miRNA miRNA MGP_WSBEiJ_T0087640.1 MGP_WSBEiJ_G0032786.1 mouse_genomes_project 8 67285241 67286588 + MGP_WSBEiJ_P0087640 Nat1 protein_coding protein_coding MGP_WSBEiJ_T0010842.1 MGP_WSBEiJ_G0008999.1 mouse_genomes_project 8 125953419 125953486 + Mir7080 miRNA miRNA MGP_WSBEiJ_T0089421.1 MGP_WSBEiJ_G0033352.1 mouse_genomes_project 8 125206128 125214294 - MGP_WSBEiJ_P0089421 Cyba protein_coding protein_coding MGP_WSBEiJ_T0089258.1 MGP_WSBEiJ_G0033315.1 mouse_genomes_project 8 122163851 122171769 - MGP_WSBEiJ_P0089258 Taf1c protein_coding protein_coding MGP_WSBEiJ_T0089259.1 MGP_WSBEiJ_G0033315.1 mouse_genomes_project 8 122163851 122171769 - MGP_WSBEiJ_P0089259 Taf1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089260.1 MGP_WSBEiJ_G0033315.1 mouse_genomes_project 8 122164695 122165722 - Taf1c protein_coding processed_transcript MGP_WSBEiJ_T0089261.1 MGP_WSBEiJ_G0033315.1 mouse_genomes_project 8 122165263 122166590 - Taf1c protein_coding retained_intron MGP_WSBEiJ_T0089262.1 MGP_WSBEiJ_G0033315.1 mouse_genomes_project 8 122165504 122167455 - Taf1c protein_coding processed_transcript MGP_WSBEiJ_T0086827.1 MGP_WSBEiJ_G0032508.1 mouse_genomes_project 8 10582880 10616758 - MGP_WSBEiJ_P0086827 Dcun1d2 protein_coding protein_coding MGP_WSBEiJ_T0086828.1 MGP_WSBEiJ_G0032508.1 mouse_genomes_project 8 10582888 10617077 - MGP_WSBEiJ_P0086828 Dcun1d2 protein_coding protein_coding MGP_WSBEiJ_T0086829.1 MGP_WSBEiJ_G0032508.1 mouse_genomes_project 8 10582889 10616782 - MGP_WSBEiJ_P0086829 Dcun1d2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086830.1 MGP_WSBEiJ_G0032508.1 mouse_genomes_project 8 10582890 10617076 - Dcun1d2 protein_coding processed_transcript MGP_WSBEiJ_T0086831.1 MGP_WSBEiJ_G0032508.1 mouse_genomes_project 8 10586828 10616785 - MGP_WSBEiJ_P0086831 Dcun1d2 protein_coding protein_coding MGP_WSBEiJ_T0086832.1 MGP_WSBEiJ_G0032508.1 mouse_genomes_project 8 10607469 10610533 - Dcun1d2 protein_coding retained_intron MGP_WSBEiJ_T0009024.1 MGP_WSBEiJ_G0007258.1 mouse_genomes_project 8 107916976 108115277 - Gm26786 lincRNA lincRNA MGP_WSBEiJ_T0086581.1 MGP_WSBEiJ_G0032438.1 mouse_genomes_project 8 415708 430737 + MGP_WSBEiJ_P0086581 Mcoln1 protein_coding protein_coding MGP_WSBEiJ_T0086582.1 MGP_WSBEiJ_G0032438.1 mouse_genomes_project 8 415755 422448 + MGP_WSBEiJ_P0086582 Mcoln1 protein_coding protein_coding MGP_WSBEiJ_T0086583.1 MGP_WSBEiJ_G0032438.1 mouse_genomes_project 8 421286 430737 + Mcoln1 protein_coding retained_intron MGP_WSBEiJ_T0086584.1 MGP_WSBEiJ_G0032438.1 mouse_genomes_project 8 426161 428521 + Mcoln1 protein_coding retained_intron MGP_WSBEiJ_T0086585.1 MGP_WSBEiJ_G0032438.1 mouse_genomes_project 8 427090 428306 + Mcoln1 protein_coding retained_intron MGP_WSBEiJ_T0086586.1 MGP_WSBEiJ_G0032438.1 mouse_genomes_project 8 428180 430729 + Mcoln1 protein_coding retained_intron MGP_WSBEiJ_T0086587.1 MGP_WSBEiJ_G0032438.1 mouse_genomes_project 8 430066 430737 + Mcoln1 protein_coding retained_intron MGP_WSBEiJ_T0086623.1 MGP_WSBEiJ_G0032446.1 mouse_genomes_project 8 591282 595620 + MGP_WSBEiJ_P0086623 Retn protein_coding protein_coding MGP_WSBEiJ_T0086624.1 MGP_WSBEiJ_G0032446.1 mouse_genomes_project 8 591282 593614 + MGP_WSBEiJ_P0086624 Retn protein_coding protein_coding MGP_WSBEiJ_T0088812.1 MGP_WSBEiJ_G0033152.1 mouse_genomes_project 8 106561286 106573572 + MGP_WSBEiJ_P0088812 Ces2h protein_coding protein_coding MGP_WSBEiJ_T0015440.1 MGP_WSBEiJ_G0013570.1 mouse_genomes_project 8 10331807 10332077 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087200.1 MGP_WSBEiJ_G0032657.1 mouse_genomes_project 8 32072688 32094753 + Gsr protein_coding processed_transcript MGP_WSBEiJ_T0087201.1 MGP_WSBEiJ_G0032657.1 mouse_genomes_project 8 32073351 32117943 + MGP_WSBEiJ_P0087201 Gsr protein_coding protein_coding MGP_WSBEiJ_T0087202.1 MGP_WSBEiJ_G0032657.1 mouse_genomes_project 8 32089742 32106027 + Gsr protein_coding processed_transcript MGP_WSBEiJ_T0087238.1 MGP_WSBEiJ_G0032666.1 mouse_genomes_project 8 33302558 33315412 + MGP_WSBEiJ_P0087238 Dusp4 protein_coding protein_coding MGP_WSBEiJ_T0009048.1 MGP_WSBEiJ_G0007277.1 mouse_genomes_project 8 124417709 124418173 + Gm27030 lincRNA lincRNA MGP_WSBEiJ_T0086833.1 MGP_WSBEiJ_G0032509.1 mouse_genomes_project 8 10616833 10652554 + MGP_WSBEiJ_P0086833 Tmco3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086834.1 MGP_WSBEiJ_G0032509.1 mouse_genomes_project 8 10616964 10654604 + MGP_WSBEiJ_P0086834 Tmco3 protein_coding protein_coding MGP_WSBEiJ_T0002292.1 MGP_WSBEiJ_G0002209.1 mouse_genomes_project 8 107249624 107250660 + TEC TEC MGP_WSBEiJ_T0009025.1 MGP_WSBEiJ_G0007259.1 mouse_genomes_project 8 107962767 107979635 + Gm10629 lincRNA lincRNA MGP_WSBEiJ_T0008974.1 MGP_WSBEiJ_G0007226.1 mouse_genomes_project 8 84541506 84546094 - Gm26887 lincRNA lincRNA MGP_WSBEiJ_T0009039.1 MGP_WSBEiJ_G0007271.1 mouse_genomes_project 8 123763579 123794628 - Fendrr lincRNA lincRNA MGP_WSBEiJ_T0009040.1 MGP_WSBEiJ_G0007271.1 mouse_genomes_project 8 123767500 123769111 - Fendrr lincRNA lincRNA MGP_WSBEiJ_T0009041.1 MGP_WSBEiJ_G0007271.1 mouse_genomes_project 8 123767816 123794706 - Fendrr lincRNA lincRNA MGP_WSBEiJ_T0087975.1 MGP_WSBEiJ_G0032879.1 mouse_genomes_project 8 71414559 71430999 - MGP_WSBEiJ_P0087975 Plvap protein_coding protein_coding MGP_WSBEiJ_T0017872.1 MGP_WSBEiJ_G0015136.1 mouse_genomes_project 8 72119515 72135749 - Gm16091 processed_transcript processed_transcript MGP_WSBEiJ_T0015437.1 MGP_WSBEiJ_G0013567.1 mouse_genomes_project 8 4046291 4047130 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005313.1 MGP_WSBEiJ_G0004500.1 mouse_genomes_project 8 116821507 116825115 - Gm16116 antisense antisense MGP_WSBEiJ_T0008915.1 MGP_WSBEiJ_G0007178.1 mouse_genomes_project 8 4437611 4487913 + Gm17215 lincRNA lincRNA MGP_WSBEiJ_T0088266.1 MGP_WSBEiJ_G0032977.1 mouse_genomes_project 8 84361001 84370619 + Palm3 protein_coding retained_intron MGP_WSBEiJ_T0088267.1 MGP_WSBEiJ_G0032977.1 mouse_genomes_project 8 84361001 84371726 + MGP_WSBEiJ_P0088267 Palm3 protein_coding protein_coding MGP_WSBEiJ_T0088268.1 MGP_WSBEiJ_G0032977.1 mouse_genomes_project 8 84367578 84368553 + Palm3 protein_coding retained_intron MGP_WSBEiJ_T0087922.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276083 71278956 + MGP_WSBEiJ_P0087922 Use1 protein_coding protein_coding MGP_WSBEiJ_T0087923.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276177 71278959 + MGP_WSBEiJ_P0087923 Use1 protein_coding protein_coding MGP_WSBEiJ_T0087924.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276240 71277042 + MGP_WSBEiJ_P0087924 Use1 protein_coding protein_coding MGP_WSBEiJ_T0087925.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276452 71278959 + Use1 protein_coding retained_intron MGP_WSBEiJ_T0087926.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276452 71278959 + Use1 protein_coding retained_intron MGP_WSBEiJ_T0087927.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276452 71278959 + MGP_WSBEiJ_P0087927 Use1 protein_coding protein_coding MGP_WSBEiJ_T0087928.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276478 71278058 + Use1 protein_coding retained_intron MGP_WSBEiJ_T0087929.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276478 71278225 + Use1 protein_coding retained_intron MGP_WSBEiJ_T0087930.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276619 71277912 + Use1 protein_coding retained_intron MGP_WSBEiJ_T0087931.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71276876 71277449 + Use1 protein_coding retained_intron MGP_WSBEiJ_T0087932.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71277015 71278959 + Use1 protein_coding retained_intron MGP_WSBEiJ_T0087933.1 MGP_WSBEiJ_G0032868.1 mouse_genomes_project 8 71278018 71278898 + Use1 protein_coding retained_intron MGP_WSBEiJ_T0086757.1 MGP_WSBEiJ_G0032494.1 mouse_genomes_project 8 9670620 9676313 + MGP_WSBEiJ_P0086757 Sox1 protein_coding protein_coding MGP_WSBEiJ_T0087983.1 MGP_WSBEiJ_G0032886.1 mouse_genomes_project 8 71517016 71521124 + MGP_WSBEiJ_P0087983 Pgls protein_coding protein_coding MGP_WSBEiJ_T0087984.1 MGP_WSBEiJ_G0032886.1 mouse_genomes_project 8 71517024 71527472 + MGP_WSBEiJ_P0087984 Pgls protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087985.1 MGP_WSBEiJ_G0032886.1 mouse_genomes_project 8 71517051 71520529 + Pgls protein_coding retained_intron MGP_WSBEiJ_T0087986.1 MGP_WSBEiJ_G0032886.1 mouse_genomes_project 8 71517077 71519971 + MGP_WSBEiJ_P0087986 Pgls protein_coding protein_coding MGP_WSBEiJ_T0087987.1 MGP_WSBEiJ_G0032886.1 mouse_genomes_project 8 71517131 71521124 + MGP_WSBEiJ_P0087987 Pgls protein_coding protein_coding MGP_WSBEiJ_T0005304.1 MGP_WSBEiJ_G0004492.1 mouse_genomes_project 8 107586562 107598105 + Gm16156 antisense antisense MGP_WSBEiJ_T0089211.1 MGP_WSBEiJ_G0033295.1 mouse_genomes_project 8 119336490 119349833 + MGP_WSBEiJ_P0089211 Atmin protein_coding protein_coding MGP_WSBEiJ_T0087082.1 MGP_WSBEiJ_G0032612.1 mouse_genomes_project 8 23222919 23271426 - MGP_WSBEiJ_P0087082 Tacc1 protein_coding protein_coding MGP_WSBEiJ_T0087083.1 MGP_WSBEiJ_G0032612.1 mouse_genomes_project 8 23222919 23271426 - MGP_WSBEiJ_P0087083 Tacc1 protein_coding protein_coding MGP_WSBEiJ_T0088731.1 MGP_WSBEiJ_G0033118.1 mouse_genomes_project 8 96477772 96493986 - MGP_WSBEiJ_P0088731 Prss54 protein_coding protein_coding MGP_WSBEiJ_T0088732.1 MGP_WSBEiJ_G0033118.1 mouse_genomes_project 8 96477931 96493728 - MGP_WSBEiJ_P0088732 Prss54 protein_coding protein_coding MGP_WSBEiJ_T0099777.1 MGP_WSBEiJ_G0038440.1 mouse_genomes_project 8 41418381 41418445 - Gm23531 snoRNA snoRNA MGP_WSBEiJ_T0087954.1 MGP_WSBEiJ_G0032875.1 mouse_genomes_project 8 71379157 71379982 + MGP_WSBEiJ_P0087954 Mrpl34 protein_coding protein_coding MGP_WSBEiJ_T0088211.1 MGP_WSBEiJ_G0032962.1 mouse_genomes_project 8 83865313 83871102 + MGP_WSBEiJ_P0088211 Ndufb7 protein_coding protein_coding MGP_WSBEiJ_T0088212.1 MGP_WSBEiJ_G0032962.1 mouse_genomes_project 8 83865400 83871102 + Ndufb7 protein_coding retained_intron MGP_WSBEiJ_T0087047.1 MGP_WSBEiJ_G0032603.1 mouse_genomes_project 8 22649854 22661314 - MGP_WSBEiJ_P0087047 Ido1 protein_coding protein_coding MGP_WSBEiJ_T0087048.1 MGP_WSBEiJ_G0032603.1 mouse_genomes_project 8 22649854 22662657 - MGP_WSBEiJ_P0087048 Ido1 protein_coding protein_coding MGP_WSBEiJ_T0089496.1 MGP_WSBEiJ_G0033376.1 mouse_genomes_project 8 126058950 126062902 - MGP_WSBEiJ_P0089496 Spata2l protein_coding protein_coding MGP_WSBEiJ_T0089497.1 MGP_WSBEiJ_G0033376.1 mouse_genomes_project 8 126058953 126062905 - MGP_WSBEiJ_P0089497 Spata2l protein_coding protein_coding MGP_WSBEiJ_T0010765.1 MGP_WSBEiJ_G0008922.1 mouse_genomes_project 8 10258016 10258146 + Gm38671 miRNA miRNA MGP_WSBEiJ_T0089025.1 MGP_WSBEiJ_G0033232.1 mouse_genomes_project 8 111347933 111397365 + MGP_WSBEiJ_P0089025 Pmfbp1 protein_coding protein_coding MGP_WSBEiJ_T0101125.1 MGP_WSBEiJ_G0039582.1 mouse_genomes_project 8 19526089 19526257 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0088170.1 MGP_WSBEiJ_G0032947.1 mouse_genomes_project 8 80797259 80883135 + MGP_WSBEiJ_P0088170 Frem3 protein_coding protein_coding MGP_WSBEiJ_T0089239.1 MGP_WSBEiJ_G0033308.1 mouse_genomes_project 8 121948034 121965230 + MGP_WSBEiJ_P0089239 Mlycd protein_coding protein_coding MGP_WSBEiJ_T0089240.1 MGP_WSBEiJ_G0033308.1 mouse_genomes_project 8 121948054 121965215 + Mlycd protein_coding retained_intron MGP_WSBEiJ_T0088123.1 MGP_WSBEiJ_G0032930.1 mouse_genomes_project 8 77598699 77634337 + MGP_WSBEiJ_P0088123 Prmt9 protein_coding protein_coding MGP_WSBEiJ_T0088124.1 MGP_WSBEiJ_G0032930.1 mouse_genomes_project 8 77598709 77612906 + Prmt9 protein_coding retained_intron MGP_WSBEiJ_T0088125.1 MGP_WSBEiJ_G0032930.1 mouse_genomes_project 8 77598712 77634337 + MGP_WSBEiJ_P0088125 Prmt9 protein_coding protein_coding MGP_WSBEiJ_T0088126.1 MGP_WSBEiJ_G0032930.1 mouse_genomes_project 8 77612589 77614021 + Prmt9 protein_coding retained_intron MGP_WSBEiJ_T0089493.1 MGP_WSBEiJ_G0033374.1 mouse_genomes_project 8 126036493 126047051 + MGP_WSBEiJ_P0089493 Spata33 protein_coding protein_coding MGP_WSBEiJ_T0087332.1 MGP_WSBEiJ_G0032695.1 mouse_genomes_project 8 42027791 42043634 - MGP_WSBEiJ_P0087332 Triml1 protein_coding protein_coding MGP_WSBEiJ_T0088634.1 MGP_WSBEiJ_G0033082.1 mouse_genomes_project 8 94928427 94962971 - MGP_WSBEiJ_P0088634 Bbs2 protein_coding protein_coding MGP_WSBEiJ_T0088635.1 MGP_WSBEiJ_G0033082.1 mouse_genomes_project 8 94928617 94930687 - Bbs2 protein_coding processed_transcript MGP_WSBEiJ_T0088636.1 MGP_WSBEiJ_G0033082.1 mouse_genomes_project 8 94936899 94942925 - Bbs2 protein_coding processed_transcript MGP_WSBEiJ_T0088091.1 MGP_WSBEiJ_G0032920.1 mouse_genomes_project 8 72792356 73315015 - MGP_WSBEiJ_P0088091 Large protein_coding protein_coding MGP_WSBEiJ_T0088092.1 MGP_WSBEiJ_G0032920.1 mouse_genomes_project 8 72792356 73314031 - MGP_WSBEiJ_P0088092 Large protein_coding protein_coding MGP_WSBEiJ_T0088093.1 MGP_WSBEiJ_G0032920.1 mouse_genomes_project 8 73002924 73059800 - Large protein_coding retained_intron MGP_WSBEiJ_T0099766.1 MGP_WSBEiJ_G0038429.1 mouse_genomes_project 8 15733982 15734092 - Gm25665 snoRNA snoRNA MGP_WSBEiJ_T0002286.1 MGP_WSBEiJ_G0002204.1 mouse_genomes_project 8 43180971 43181799 - TEC TEC MGP_WSBEiJ_T0087244.1 MGP_WSBEiJ_G0032671.1 mouse_genomes_project 8 34371284 34425913 + MGP_WSBEiJ_P0087244 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099811.1 MGP_WSBEiJ_G0038474.1 mouse_genomes_project 8 111704920 111705005 + Snord71 snoRNA snoRNA MGP_WSBEiJ_T0086991.1 MGP_WSBEiJ_G0032585.1 mouse_genomes_project 8 20482480 20508942 + MGP_WSBEiJ_P0086991 Slc20a2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099810.1 MGP_WSBEiJ_G0038473.1 mouse_genomes_project 8 107645967 107646098 - Gm22972 snoRNA snoRNA MGP_WSBEiJ_T0015433.1 MGP_WSBEiJ_G0013563.1 mouse_genomes_project 8 1727222 1727448 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010802.1 MGP_WSBEiJ_G0008959.1 mouse_genomes_project 8 84556755 84556830 + Mir23a miRNA miRNA MGP_WSBEiJ_T0089599.1 MGP_WSBEiJ_G0033408.1 mouse_genomes_project 8 127753939 127784792 + MGP_WSBEiJ_P0089599 Gnpat protein_coding protein_coding MGP_WSBEiJ_T0089600.1 MGP_WSBEiJ_G0033408.1 mouse_genomes_project 8 127753978 127779526 + MGP_WSBEiJ_P0089600 Gnpat protein_coding protein_coding MGP_WSBEiJ_T0089601.1 MGP_WSBEiJ_G0033408.1 mouse_genomes_project 8 127776244 127779847 + Gnpat protein_coding retained_intron MGP_WSBEiJ_T0089602.1 MGP_WSBEiJ_G0033408.1 mouse_genomes_project 8 127776313 127784283 + Gnpat protein_coding retained_intron MGP_WSBEiJ_T0089603.1 MGP_WSBEiJ_G0033408.1 mouse_genomes_project 8 127778295 127779705 + Gnpat protein_coding retained_intron MGP_WSBEiJ_T0089604.1 MGP_WSBEiJ_G0033408.1 mouse_genomes_project 8 127780426 127784353 + Gnpat protein_coding retained_intron MGP_WSBEiJ_T0088907.1 MGP_WSBEiJ_G0033192.1 mouse_genomes_project 8 107530588 107542957 + MGP_WSBEiJ_P0088907 Edc4 protein_coding protein_coding MGP_WSBEiJ_T0088908.1 MGP_WSBEiJ_G0033192.1 mouse_genomes_project 8 107530658 107542940 + MGP_WSBEiJ_P0088908 Edc4 protein_coding protein_coding MGP_WSBEiJ_T0088909.1 MGP_WSBEiJ_G0033192.1 mouse_genomes_project 8 107530784 107544640 + MGP_WSBEiJ_P0088909 Edc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088910.1 MGP_WSBEiJ_G0033192.1 mouse_genomes_project 8 107536679 107537856 + Edc4 protein_coding retained_intron MGP_WSBEiJ_T0088911.1 MGP_WSBEiJ_G0033192.1 mouse_genomes_project 8 107537088 107539269 + MGP_WSBEiJ_P0088911 Edc4 protein_coding protein_coding MGP_WSBEiJ_T0088912.1 MGP_WSBEiJ_G0033192.1 mouse_genomes_project 8 107537102 107538427 + MGP_WSBEiJ_P0088912 Edc4 protein_coding protein_coding MGP_WSBEiJ_T0088913.1 MGP_WSBEiJ_G0033192.1 mouse_genomes_project 8 107540003 107541064 + Edc4 protein_coding retained_intron MGP_WSBEiJ_T0088029.1 MGP_WSBEiJ_G0032896.1 mouse_genomes_project 8 71866099 71892952 + MGP_WSBEiJ_P0088029 protein_coding protein_coding MGP_WSBEiJ_T0088032.1 MGP_WSBEiJ_G0032896.1 mouse_genomes_project 8 71882509 71894356 + MGP_WSBEiJ_P0088032 protein_coding protein_coding MGP_WSBEiJ_T0088905.1 MGP_WSBEiJ_G0033190.1 mouse_genomes_project 8 107502492 107504340 + MGP_WSBEiJ_P0088905 Thap11 protein_coding protein_coding MGP_WSBEiJ_T0087684.1 MGP_WSBEiJ_G0032796.1 mouse_genomes_project 8 68954331 69006690 - MGP_WSBEiJ_P0087684 Lzts1 protein_coding protein_coding MGP_WSBEiJ_T0087685.1 MGP_WSBEiJ_G0032796.1 mouse_genomes_project 8 68957155 68962611 - MGP_WSBEiJ_P0087685 Lzts1 protein_coding protein_coding MGP_WSBEiJ_T0087686.1 MGP_WSBEiJ_G0032796.1 mouse_genomes_project 8 68987854 69006680 - Lzts1 protein_coding processed_transcript MGP_WSBEiJ_T0087687.1 MGP_WSBEiJ_G0032796.1 mouse_genomes_project 8 69004637 69006670 - Lzts1 protein_coding processed_transcript MGP_WSBEiJ_T0087688.1 MGP_WSBEiJ_G0032796.1 mouse_genomes_project 8 69006176 69006654 - Lzts1 protein_coding retained_intron MGP_WSBEiJ_T0087903.1 MGP_WSBEiJ_G0032860.1 mouse_genomes_project 8 70772968 70775268 + MGP_WSBEiJ_P0087903 protein_coding protein_coding MGP_WSBEiJ_T0005314.1 MGP_WSBEiJ_G0004501.1 mouse_genomes_project 8 116870880 116873457 - Gm16117 antisense antisense MGP_WSBEiJ_T0005263.1 MGP_WSBEiJ_G0004459.1 mouse_genomes_project 8 20761301 20765083 + 1700041G16Rik antisense antisense MGP_WSBEiJ_T0005264.1 MGP_WSBEiJ_G0004459.1 mouse_genomes_project 8 20763820 20764278 + 1700041G16Rik antisense antisense MGP_WSBEiJ_T0086995.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20613653 20662918 - MGP_WSBEiJ_P0086995 Ikbkb protein_coding protein_coding MGP_WSBEiJ_T0086996.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20613654 20662880 - MGP_WSBEiJ_P0086996 Ikbkb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086997.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20613654 20662874 - MGP_WSBEiJ_P0086997 Ikbkb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086998.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20614209 20662929 - MGP_WSBEiJ_P0086998 Ikbkb protein_coding protein_coding MGP_WSBEiJ_T0086999.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20614549 20615924 - MGP_WSBEiJ_P0086999 Ikbkb protein_coding protein_coding MGP_WSBEiJ_T0087000.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20614798 20662918 - Ikbkb protein_coding retained_intron MGP_WSBEiJ_T0087001.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20622454 20623470 - Ikbkb protein_coding retained_intron MGP_WSBEiJ_T0087002.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20630427 20662880 - Ikbkb protein_coding retained_intron MGP_WSBEiJ_T0087003.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20635655 20662879 - Ikbkb protein_coding retained_intron MGP_WSBEiJ_T0087004.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20637200 20648456 - MGP_WSBEiJ_P0087004 Ikbkb protein_coding protein_coding MGP_WSBEiJ_T0087005.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20643520 20662899 - Ikbkb protein_coding retained_intron MGP_WSBEiJ_T0087006.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20646230 20662914 - Ikbkb protein_coding retained_intron MGP_WSBEiJ_T0087007.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20658353 20662903 - Ikbkb protein_coding retained_intron MGP_WSBEiJ_T0087008.1 MGP_WSBEiJ_G0032589.1 mouse_genomes_project 8 20658779 20662865 - Ikbkb protein_coding processed_transcript MGP_WSBEiJ_T0089246.1 MGP_WSBEiJ_G0033310.1 mouse_genomes_project 8 122002581 122028434 + MGP_WSBEiJ_P0089246 Necab2 protein_coding protein_coding MGP_WSBEiJ_T0089247.1 MGP_WSBEiJ_G0033310.1 mouse_genomes_project 8 122002623 122028205 + Necab2 protein_coding processed_transcript MGP_WSBEiJ_T0089248.1 MGP_WSBEiJ_G0033310.1 mouse_genomes_project 8 122008228 122026739 + MGP_WSBEiJ_P0089248 Necab2 protein_coding protein_coding MGP_WSBEiJ_T0005266.1 MGP_WSBEiJ_G0004461.1 mouse_genomes_project 8 24216333 24237729 + 1700047A11Rik antisense antisense MGP_WSBEiJ_T0005267.1 MGP_WSBEiJ_G0004461.1 mouse_genomes_project 8 24216340 24223017 + 1700047A11Rik antisense antisense MGP_WSBEiJ_T0088363.1 MGP_WSBEiJ_G0033003.1 mouse_genomes_project 8 85255048 85257893 - MGP_WSBEiJ_P0088363 protein_coding protein_coding MGP_WSBEiJ_T0086712.1 MGP_WSBEiJ_G0032475.1 mouse_genomes_project 8 5781045 5783957 + MGP_WSBEiJ_P0086712 protein_coding protein_coding MGP_WSBEiJ_T0088837.1 MGP_WSBEiJ_G0033160.1 mouse_genomes_project 8 106853707 106858378 + MGP_WSBEiJ_P0088837 Fbxl8 protein_coding protein_coding MGP_WSBEiJ_T0088838.1 MGP_WSBEiJ_G0033160.1 mouse_genomes_project 8 106853741 106858222 + MGP_WSBEiJ_P0088838 Fbxl8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010822.1 MGP_WSBEiJ_G0008979.1 mouse_genomes_project 8 107603725 107603788 - Mir7074 miRNA miRNA MGP_WSBEiJ_T0088940.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107801462 107808118 - MGP_WSBEiJ_P0088940 Esrp2 protein_coding protein_coding MGP_WSBEiJ_T0088941.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107803368 107807957 - MGP_WSBEiJ_P0088941 Esrp2 protein_coding protein_coding MGP_WSBEiJ_T0088942.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107803871 107804219 - Esrp2 protein_coding processed_transcript MGP_WSBEiJ_T0088943.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107803958 107805868 - Esrp2 protein_coding retained_intron MGP_WSBEiJ_T0088944.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107804411 107805272 - Esrp2 protein_coding retained_intron MGP_WSBEiJ_T0088945.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107804671 107805272 - Esrp2 protein_coding retained_intron MGP_WSBEiJ_T0088946.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107804945 107806240 - Esrp2 protein_coding retained_intron MGP_WSBEiJ_T0088947.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107805102 107806085 - Esrp2 protein_coding retained_intron MGP_WSBEiJ_T0088948.1 MGP_WSBEiJ_G0033204.1 mouse_genomes_project 8 107807326 107807829 - Esrp2 protein_coding retained_intron MGP_WSBEiJ_T0088638.1 MGP_WSBEiJ_G0033084.1 mouse_genomes_project 8 95026066 95027624 + MGP_WSBEiJ_P0088638 Mt3 protein_coding protein_coding MGP_WSBEiJ_T0015474.1 MGP_WSBEiJ_G0013604.1 mouse_genomes_project 8 76271025 76272033 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089608.1 MGP_WSBEiJ_G0033412.1 mouse_genomes_project 8 127919213 127938600 + MGP_WSBEiJ_P0089608 Tsnax protein_coding protein_coding MGP_WSBEiJ_T0087734.1 MGP_WSBEiJ_G0032813.1 mouse_genomes_project 8 69746638 69792581 - MGP_WSBEiJ_P0087734 Gatad2a protein_coding unknown_likely_coding MGP_WSBEiJ_T0087735.1 MGP_WSBEiJ_G0032813.1 mouse_genomes_project 8 69746643 69835511 - MGP_WSBEiJ_P0087735 Gatad2a protein_coding protein_coding MGP_WSBEiJ_T0087736.1 MGP_WSBEiJ_G0032813.1 mouse_genomes_project 8 69746643 69813310 - MGP_WSBEiJ_P0087736 Gatad2a protein_coding protein_coding MGP_WSBEiJ_T0087737.1 MGP_WSBEiJ_G0032813.1 mouse_genomes_project 8 69746643 69835511 - MGP_WSBEiJ_P0087737 Gatad2a protein_coding protein_coding MGP_WSBEiJ_T0087388.1 MGP_WSBEiJ_G0032711.1 mouse_genomes_project 8 45000384 45025420 + MGP_WSBEiJ_P0087388 Ufsp2 protein_coding protein_coding MGP_WSBEiJ_T0087389.1 MGP_WSBEiJ_G0032711.1 mouse_genomes_project 8 45000390 45025319 + Ufsp2 protein_coding retained_intron MGP_WSBEiJ_T0087390.1 MGP_WSBEiJ_G0032711.1 mouse_genomes_project 8 45000400 45006620 + Ufsp2 protein_coding retained_intron MGP_WSBEiJ_T0087391.1 MGP_WSBEiJ_G0032711.1 mouse_genomes_project 8 45000406 45011124 + Ufsp2 protein_coding processed_transcript MGP_WSBEiJ_T0087392.1 MGP_WSBEiJ_G0032711.1 mouse_genomes_project 8 45000434 45006188 + Ufsp2 protein_coding processed_transcript MGP_WSBEiJ_T0087393.1 MGP_WSBEiJ_G0032711.1 mouse_genomes_project 8 45023589 45025322 + Ufsp2 protein_coding retained_intron MGP_WSBEiJ_T0088664.1 MGP_WSBEiJ_G0033094.1 mouse_genomes_project 8 95570254 95579854 + MGP_WSBEiJ_P0088664 Arl2bp protein_coding protein_coding MGP_WSBEiJ_T0088665.1 MGP_WSBEiJ_G0033094.1 mouse_genomes_project 8 95570725 95577693 + MGP_WSBEiJ_P0088665 Arl2bp protein_coding protein_coding MGP_WSBEiJ_T0089120.1 MGP_WSBEiJ_G0033264.1 mouse_genomes_project 8 113123959 113235669 - MGP_WSBEiJ_P0089120 Glg1 protein_coding protein_coding MGP_WSBEiJ_T0089121.1 MGP_WSBEiJ_G0033264.1 mouse_genomes_project 8 113127059 113147292 - MGP_WSBEiJ_P0089121 Glg1 protein_coding protein_coding MGP_WSBEiJ_T0089122.1 MGP_WSBEiJ_G0033264.1 mouse_genomes_project 8 113127099 113235653 - MGP_WSBEiJ_P0089122 Glg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089123.1 MGP_WSBEiJ_G0033264.1 mouse_genomes_project 8 113127432 113235669 - MGP_WSBEiJ_P0089123 Glg1 protein_coding protein_coding MGP_WSBEiJ_T0086723.1 MGP_WSBEiJ_G0032483.1 mouse_genomes_project 8 8399300 8517220 - MGP_WSBEiJ_P0086723 Col4a1 protein_coding protein_coding MGP_WSBEiJ_T0086724.1 MGP_WSBEiJ_G0032483.1 mouse_genomes_project 8 8413272 8417673 - Col4a1 protein_coding processed_transcript MGP_WSBEiJ_T0089389.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124720698 124769680 + MGP_WSBEiJ_P0089389 Banp protein_coding protein_coding MGP_WSBEiJ_T0089390.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124721440 124798498 + MGP_WSBEiJ_P0089390 Banp protein_coding protein_coding MGP_WSBEiJ_T0089391.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124721492 124801580 + MGP_WSBEiJ_P0089391 Banp protein_coding protein_coding MGP_WSBEiJ_T0089392.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124721523 124769678 + MGP_WSBEiJ_P0089392 Banp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089393.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124721528 124798259 + MGP_WSBEiJ_P0089393 Banp protein_coding protein_coding MGP_WSBEiJ_T0089394.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124721533 124764065 + MGP_WSBEiJ_P0089394 Banp protein_coding protein_coding MGP_WSBEiJ_T0089395.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124721544 124764056 + MGP_WSBEiJ_P0089395 Banp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089396.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124721553 124764082 + MGP_WSBEiJ_P0089396 Banp protein_coding protein_coding MGP_WSBEiJ_T0089397.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124746142 124748180 + Banp protein_coding retained_intron MGP_WSBEiJ_T0089398.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124746190 124797957 + MGP_WSBEiJ_P0089398 Banp protein_coding protein_coding MGP_WSBEiJ_T0089399.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124750014 124762498 + Banp protein_coding retained_intron MGP_WSBEiJ_T0089400.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124763953 124769735 + Banp protein_coding retained_intron MGP_WSBEiJ_T0089401.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124764099 124798279 + MGP_WSBEiJ_P0089401 Banp protein_coding protein_coding MGP_WSBEiJ_T0089402.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124769585 124797929 + MGP_WSBEiJ_P0089402 Banp protein_coding protein_coding MGP_WSBEiJ_T0089403.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124773165 124792997 + Banp protein_coding processed_transcript MGP_WSBEiJ_T0089404.1 MGP_WSBEiJ_G0033347.1 mouse_genomes_project 8 124773343 124779637 + Banp protein_coding retained_intron MGP_WSBEiJ_T0087879.1 MGP_WSBEiJ_G0032849.1 mouse_genomes_project 8 70599783 70600326 - MGP_WSBEiJ_P0087879 protein_coding protein_coding MGP_WSBEiJ_T0088733.1 MGP_WSBEiJ_G0033119.1 mouse_genomes_project 8 96556558 96568910 + MGP_WSBEiJ_P0088733 Gins3 protein_coding protein_coding MGP_WSBEiJ_T0099779.1 MGP_WSBEiJ_G0038442.1 mouse_genomes_project 8 44580897 44581034 - Gm23604 snoRNA snoRNA MGP_WSBEiJ_T0088431.1 MGP_WSBEiJ_G0033020.1 mouse_genomes_project 8 85489135 85489550 - MGP_WSBEiJ_P0088431 Gm5741 protein_coding protein_coding MGP_WSBEiJ_T0015488.1 MGP_WSBEiJ_G0013618.1 mouse_genomes_project 8 86294572 86295638 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087161.1 MGP_WSBEiJ_G0032635.1 mouse_genomes_project 8 25331132 25375240 - MGP_WSBEiJ_P0087161 Rab11fip1 protein_coding protein_coding MGP_WSBEiJ_T0087162.1 MGP_WSBEiJ_G0032635.1 mouse_genomes_project 8 25331132 25375240 - MGP_WSBEiJ_P0087162 Rab11fip1 protein_coding protein_coding MGP_WSBEiJ_T0089063.1 MGP_WSBEiJ_G0033249.1 mouse_genomes_project 8 112032345 112062077 - MGP_WSBEiJ_P0089063 Calb2 protein_coding protein_coding MGP_WSBEiJ_T0086953.1 MGP_WSBEiJ_G0032563.1 mouse_genomes_project 8 19525170 19526300 - MGP_WSBEiJ_P0086953 protein_coding protein_coding MGP_WSBEiJ_T0096860.1 MGP_WSBEiJ_G0035541.1 mouse_genomes_project 8 120262610 120263783 + pseudogene pseudogene MGP_WSBEiJ_T0087563.1 MGP_WSBEiJ_G0032763.1 mouse_genomes_project 8 60549113 60690291 + MGP_WSBEiJ_P0087563 Nek1 protein_coding protein_coding MGP_WSBEiJ_T0087564.1 MGP_WSBEiJ_G0032763.1 mouse_genomes_project 8 60549113 60690284 + MGP_WSBEiJ_P0087564 Nek1 protein_coding protein_coding MGP_WSBEiJ_T0087565.1 MGP_WSBEiJ_G0032763.1 mouse_genomes_project 8 60549118 60595040 + Nek1 protein_coding retained_intron MGP_WSBEiJ_T0087566.1 MGP_WSBEiJ_G0032763.1 mouse_genomes_project 8 60549157 60664952 + Nek1 protein_coding retained_intron MGP_WSBEiJ_T0087567.1 MGP_WSBEiJ_G0032763.1 mouse_genomes_project 8 60549159 60579637 + Nek1 protein_coding retained_intron MGP_WSBEiJ_T0087568.1 MGP_WSBEiJ_G0032763.1 mouse_genomes_project 8 60549159 60579114 + Nek1 protein_coding retained_intron MGP_WSBEiJ_T0087569.1 MGP_WSBEiJ_G0032763.1 mouse_genomes_project 8 60600332 60647458 + MGP_WSBEiJ_P0087569 Nek1 protein_coding protein_coding MGP_WSBEiJ_T0086955.1 MGP_WSBEiJ_G0032565.1 mouse_genomes_project 8 19677232 19685001 + MGP_WSBEiJ_P0086955 Defb50 protein_coding protein_coding MGP_WSBEiJ_T0098548.1 MGP_WSBEiJ_G0037211.1 mouse_genomes_project 8 76250578 76250685 - Gm22509 snRNA snRNA MGP_WSBEiJ_T0086937.1 MGP_WSBEiJ_G0032548.1 mouse_genomes_project 8 16685553 16686409 + MGP_WSBEiJ_P0086937 Defb14 protein_coding protein_coding MGP_WSBEiJ_T0086780.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10176638 10182982 + MGP_WSBEiJ_P0086780 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086781.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10176659 10328919 + MGP_WSBEiJ_P0086781 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086782.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10176780 10193996 + Mcf2l protein_coding processed_transcript MGP_WSBEiJ_T0086783.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10222968 10330772 + MGP_WSBEiJ_P0086783 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086784.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10223605 10330376 + MGP_WSBEiJ_P0086784 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086785.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10223623 10301975 + Mcf2l protein_coding processed_transcript MGP_WSBEiJ_T0086786.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10223687 10329175 + MGP_WSBEiJ_P0086786 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086787.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10235606 10328043 + MGP_WSBEiJ_P0086787 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086788.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10257980 10297967 + Mcf2l protein_coding retained_intron MGP_WSBEiJ_T0086789.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10258028 10323891 + MGP_WSBEiJ_P0086789 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086790.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10258189 10330373 + MGP_WSBEiJ_P0086790 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086791.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10259490 10329141 + MGP_WSBEiJ_P0086791 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086792.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10259558 10330368 + MGP_WSBEiJ_P0086792 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086793.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10294091 10327334 + MGP_WSBEiJ_P0086793 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086794.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10294096 10321301 + MGP_WSBEiJ_P0086794 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086795.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10294111 10330372 + MGP_WSBEiJ_P0086795 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086796.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10321248 10330394 + MGP_WSBEiJ_P0086796 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086797.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10321264 10327960 + MGP_WSBEiJ_P0086797 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086798.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10321572 10327305 + MGP_WSBEiJ_P0086798 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086799.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10322816 10325227 + Mcf2l protein_coding retained_intron MGP_WSBEiJ_T0086800.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10323420 10328865 + MGP_WSBEiJ_P0086800 Mcf2l protein_coding protein_coding MGP_WSBEiJ_T0086801.1 MGP_WSBEiJ_G0032499.1 mouse_genomes_project 8 10327037 10328873 + Mcf2l protein_coding retained_intron MGP_WSBEiJ_T0086936.1 MGP_WSBEiJ_G0032547.1 mouse_genomes_project 8 16658357 16660047 + MGP_WSBEiJ_P0086936 Spag11a protein_coding protein_coding MGP_WSBEiJ_T0088147.1 MGP_WSBEiJ_G0032938.1 mouse_genomes_project 8 79148479 79321437 + MGP_WSBEiJ_P0088147 Zfp827 protein_coding protein_coding MGP_WSBEiJ_T0088148.1 MGP_WSBEiJ_G0032938.1 mouse_genomes_project 8 79148479 79193062 + MGP_WSBEiJ_P0088148 Zfp827 protein_coding protein_coding MGP_WSBEiJ_T0088149.1 MGP_WSBEiJ_G0032938.1 mouse_genomes_project 8 79148625 79318558 + MGP_WSBEiJ_P0088149 Zfp827 protein_coding protein_coding MGP_WSBEiJ_T0088150.1 MGP_WSBEiJ_G0032938.1 mouse_genomes_project 8 79239715 79321460 + MGP_WSBEiJ_P0088150 Zfp827 protein_coding protein_coding MGP_WSBEiJ_T0088151.1 MGP_WSBEiJ_G0032938.1 mouse_genomes_project 8 79241870 79320891 + MGP_WSBEiJ_P0088151 Zfp827 protein_coding protein_coding MGP_WSBEiJ_T0088152.1 MGP_WSBEiJ_G0032938.1 mouse_genomes_project 8 79303575 79318556 + MGP_WSBEiJ_P0088152 Zfp827 protein_coding protein_coding MGP_WSBEiJ_T0088153.1 MGP_WSBEiJ_G0032938.1 mouse_genomes_project 8 79306730 79317463 + MGP_WSBEiJ_P0088153 Zfp827 protein_coding protein_coding MGP_WSBEiJ_T0002299.1 MGP_WSBEiJ_G0002216.1 mouse_genomes_project 8 123856730 123857396 + TEC TEC MGP_WSBEiJ_T0089164.1 MGP_WSBEiJ_G0033279.1 mouse_genomes_project 8 114030540 114058716 - MGP_WSBEiJ_P0089164 Adat1 protein_coding protein_coding MGP_WSBEiJ_T0089165.1 MGP_WSBEiJ_G0033279.1 mouse_genomes_project 8 114036574 114058675 - MGP_WSBEiJ_P0089165 Adat1 protein_coding protein_coding MGP_WSBEiJ_T0098531.1 MGP_WSBEiJ_G0037194.1 mouse_genomes_project 8 25978609 25978712 - Gm24202 snRNA snRNA MGP_WSBEiJ_T0086931.1 MGP_WSBEiJ_G0032543.1 mouse_genomes_project 8 16613456 16614307 - MGP_WSBEiJ_P0086931 protein_coding protein_coding MGP_WSBEiJ_T0089427.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125259757 125267374 + MGP_WSBEiJ_P0089427 Ctu2 protein_coding protein_coding MGP_WSBEiJ_T0089428.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125259823 125268420 + MGP_WSBEiJ_P0089428 Ctu2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089429.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125259827 125266023 + Ctu2 protein_coding retained_intron MGP_WSBEiJ_T0089430.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125259827 125262842 + MGP_WSBEiJ_P0089430 Ctu2 protein_coding protein_coding MGP_WSBEiJ_T0089431.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125259834 125263940 + MGP_WSBEiJ_P0089431 Ctu2 protein_coding protein_coding MGP_WSBEiJ_T0089432.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125259857 125263545 + Ctu2 protein_coding retained_intron MGP_WSBEiJ_T0089433.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125261321 125262874 + Ctu2 protein_coding retained_intron MGP_WSBEiJ_T0089434.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125265202 125266022 + Ctu2 protein_coding retained_intron MGP_WSBEiJ_T0089435.1 MGP_WSBEiJ_G0033356.1 mouse_genomes_project 8 125265237 125266026 + MGP_WSBEiJ_P0089435 Ctu2 protein_coding protein_coding MGP_WSBEiJ_T0089271.1 MGP_WSBEiJ_G0033322.1 mouse_genomes_project 8 122456815 122471338 + MGP_WSBEiJ_P0089271 Klhl36 protein_coding protein_coding MGP_WSBEiJ_T0009049.1 MGP_WSBEiJ_G0007278.1 mouse_genomes_project 8 124614365 124624939 + Gm26812 lincRNA lincRNA MGP_WSBEiJ_T0009050.1 MGP_WSBEiJ_G0007278.1 mouse_genomes_project 8 124616057 124624651 + Gm26812 lincRNA lincRNA MGP_WSBEiJ_T0087353.1 MGP_WSBEiJ_G0032706.1 mouse_genomes_project 8 44403773 44419293 - MGP_WSBEiJ_P0087353 Tlr3 protein_coding protein_coding MGP_WSBEiJ_T0087354.1 MGP_WSBEiJ_G0032706.1 mouse_genomes_project 8 44404019 44419361 - MGP_WSBEiJ_P0087354 Tlr3 protein_coding protein_coding MGP_WSBEiJ_T0087446.1 MGP_WSBEiJ_G0032724.1 mouse_genomes_project 8 46258191 46436481 - MGP_WSBEiJ_P0087446 Stox2 protein_coding protein_coding MGP_WSBEiJ_T0087447.1 MGP_WSBEiJ_G0032724.1 mouse_genomes_project 8 46258191 46371954 - MGP_WSBEiJ_P0087447 Stox2 protein_coding protein_coding MGP_WSBEiJ_T0087052.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22740637 22754102 - MGP_WSBEiJ_P0087052 Adam3 protein_coding protein_coding MGP_WSBEiJ_T0087053.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22740644 22801179 - MGP_WSBEiJ_P0087053 Adam3 protein_coding protein_coding MGP_WSBEiJ_T0087054.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22740713 22801125 - MGP_WSBEiJ_P0087054 Adam3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087055.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22746953 22801115 - MGP_WSBEiJ_P0087055 Adam3 protein_coding protein_coding MGP_WSBEiJ_T0087056.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22777611 22801115 - MGP_WSBEiJ_P0087056 Adam3 protein_coding protein_coding MGP_WSBEiJ_T0087057.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22789622 22801112 - Adam3 protein_coding processed_transcript MGP_WSBEiJ_T0087058.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22789696 22801127 - Adam3 protein_coding processed_transcript MGP_WSBEiJ_T0087059.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22789697 22801152 - Adam3 protein_coding processed_transcript MGP_WSBEiJ_T0087060.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22789736 22801115 - MGP_WSBEiJ_P0087060 Adam3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087061.1 MGP_WSBEiJ_G0032605.1 mouse_genomes_project 8 22789761 22801109 - MGP_WSBEiJ_P0087061 Adam3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086864.1 MGP_WSBEiJ_G0032523.1 mouse_genomes_project 8 11275943 11305568 + MGP_WSBEiJ_P0086864 Fbxo25 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086865.1 MGP_WSBEiJ_G0032523.1 mouse_genomes_project 8 11275962 11306437 + MGP_WSBEiJ_P0086865 Fbxo25 protein_coding protein_coding MGP_WSBEiJ_T0089249.1 MGP_WSBEiJ_G0033311.1 mouse_genomes_project 8 122034972 122060331 - MGP_WSBEiJ_P0089249 Slc38a8 protein_coding protein_coding MGP_WSBEiJ_T0089250.1 MGP_WSBEiJ_G0033311.1 mouse_genomes_project 8 122041107 122053924 - MGP_WSBEiJ_P0089250 Slc38a8 protein_coding protein_coding MGP_WSBEiJ_T0089251.1 MGP_WSBEiJ_G0033311.1 mouse_genomes_project 8 122041686 122051852 - Slc38a8 protein_coding retained_intron MGP_WSBEiJ_T0089252.1 MGP_WSBEiJ_G0033311.1 mouse_genomes_project 8 122051156 122059922 - MGP_WSBEiJ_P0089252 Slc38a8 protein_coding protein_coding MGP_WSBEiJ_T0089253.1 MGP_WSBEiJ_G0033311.1 mouse_genomes_project 8 122053021 122060328 - MGP_WSBEiJ_P0089253 Slc38a8 protein_coding protein_coding MGP_WSBEiJ_T0088730.1 MGP_WSBEiJ_G0033117.1 mouse_genomes_project 8 96450507 96477528 + MGP_WSBEiJ_P0088730 Ccdc113 protein_coding protein_coding MGP_WSBEiJ_T0087084.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23617284 23662328 + MGP_WSBEiJ_P0087084 Fgfr1 protein_coding protein_coding MGP_WSBEiJ_T0087085.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23622389 23683042 + MGP_WSBEiJ_P0087085 Fgfr1 protein_coding protein_coding MGP_WSBEiJ_T0087086.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23622389 23683042 + MGP_WSBEiJ_P0087086 Fgfr1 protein_coding protein_coding MGP_WSBEiJ_T0087087.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23622405 23681580 + MGP_WSBEiJ_P0087087 Fgfr1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087088.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23622409 23683042 + MGP_WSBEiJ_P0087088 Fgfr1 protein_coding protein_coding MGP_WSBEiJ_T0087089.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23622412 23682092 + MGP_WSBEiJ_P0087089 Fgfr1 protein_coding protein_coding MGP_WSBEiJ_T0087090.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23622512 23662418 + Fgfr1 protein_coding processed_transcript MGP_WSBEiJ_T0087091.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23622936 23682090 + MGP_WSBEiJ_P0087091 Fgfr1 protein_coding protein_coding MGP_WSBEiJ_T0087092.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23623464 23662489 + MGP_WSBEiJ_P0087092 Fgfr1 protein_coding protein_coding MGP_WSBEiJ_T0087093.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23637411 23681887 + MGP_WSBEiJ_P0087093 Fgfr1 protein_coding protein_coding MGP_WSBEiJ_T0087094.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23662376 23677521 + Fgfr1 protein_coding processed_transcript MGP_WSBEiJ_T0087095.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23664831 23670488 + Fgfr1 protein_coding retained_intron MGP_WSBEiJ_T0087096.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23670178 23682096 + Fgfr1 protein_coding retained_intron MGP_WSBEiJ_T0087097.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23673609 23682095 + Fgfr1 protein_coding retained_intron MGP_WSBEiJ_T0087098.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23676797 23679705 + Fgfr1 protein_coding retained_intron MGP_WSBEiJ_T0087099.1 MGP_WSBEiJ_G0032613.1 mouse_genomes_project 8 23677034 23679767 + Fgfr1 protein_coding retained_intron MGP_WSBEiJ_T0089158.1 MGP_WSBEiJ_G0033274.1 mouse_genomes_project 8 113808282 113900323 - MGP_WSBEiJ_P0089158 Cfdp1 protein_coding protein_coding MGP_WSBEiJ_T0097117.1 MGP_WSBEiJ_G0035798.1 mouse_genomes_project 8 117318134 117318234 - Gm22556 rRNA rRNA MGP_WSBEiJ_T0089203.1 MGP_WSBEiJ_G0033292.1 mouse_genomes_project 8 118927737 119106862 - MGP_WSBEiJ_P0089203 Cdyl2 protein_coding protein_coding MGP_WSBEiJ_T0088200.1 MGP_WSBEiJ_G0032958.1 mouse_genomes_project 8 83595730 83617469 - MGP_WSBEiJ_P0088200 Elmod2 protein_coding protein_coding MGP_WSBEiJ_T0088201.1 MGP_WSBEiJ_G0032958.1 mouse_genomes_project 8 83596120 83617469 - MGP_WSBEiJ_P0088201 Elmod2 protein_coding protein_coding MGP_WSBEiJ_T0088202.1 MGP_WSBEiJ_G0032958.1 mouse_genomes_project 8 83598584 83609617 - Elmod2 protein_coding retained_intron MGP_WSBEiJ_T0088203.1 MGP_WSBEiJ_G0032958.1 mouse_genomes_project 8 83600868 83616432 - Elmod2 protein_coding retained_intron MGP_WSBEiJ_T0088204.1 MGP_WSBEiJ_G0032958.1 mouse_genomes_project 8 83609210 83617387 - Elmod2 protein_coding retained_intron MGP_WSBEiJ_T0088205.1 MGP_WSBEiJ_G0032958.1 mouse_genomes_project 8 83613676 83617387 - Elmod2 protein_coding retained_intron MGP_WSBEiJ_T0098555.1 MGP_WSBEiJ_G0037218.1 mouse_genomes_project 8 86735010 86735108 + Gm24490 snRNA snRNA MGP_WSBEiJ_T0086745.1 MGP_WSBEiJ_G0032491.1 mouse_genomes_project 8 8967161 9073285 + MGP_WSBEiJ_P0086745 Arhgef7 protein_coding protein_coding MGP_WSBEiJ_T0086746.1 MGP_WSBEiJ_G0032491.1 mouse_genomes_project 8 8967161 9069206 + MGP_WSBEiJ_P0086746 Arhgef7 protein_coding protein_coding MGP_WSBEiJ_T0086747.1 MGP_WSBEiJ_G0032491.1 mouse_genomes_project 8 8997462 9081346 + MGP_WSBEiJ_P0086747 Arhgef7 protein_coding protein_coding MGP_WSBEiJ_T0086748.1 MGP_WSBEiJ_G0032491.1 mouse_genomes_project 8 8997462 9081346 + MGP_WSBEiJ_P0086748 Arhgef7 protein_coding protein_coding MGP_WSBEiJ_T0086749.1 MGP_WSBEiJ_G0032491.1 mouse_genomes_project 8 9021673 9081346 + MGP_WSBEiJ_P0086749 Arhgef7 protein_coding protein_coding MGP_WSBEiJ_T0086750.1 MGP_WSBEiJ_G0032491.1 mouse_genomes_project 8 9058516 9062495 + Arhgef7 protein_coding processed_transcript MGP_WSBEiJ_T0086751.1 MGP_WSBEiJ_G0032491.1 mouse_genomes_project 8 9076373 9078428 + Arhgef7 protein_coding processed_transcript MGP_WSBEiJ_T0088056.1 MGP_WSBEiJ_G0032903.1 mouse_genomes_project 8 72165361 72176810 + MGP_WSBEiJ_P0088056 Hsh2d protein_coding protein_coding MGP_WSBEiJ_T0088057.1 MGP_WSBEiJ_G0032903.1 mouse_genomes_project 8 72169323 72176847 + MGP_WSBEiJ_P0088057 Hsh2d protein_coding protein_coding MGP_WSBEiJ_T0002284.1 MGP_WSBEiJ_G0002202.1 mouse_genomes_project 8 12432564 12436673 - TEC TEC MGP_WSBEiJ_T0008986.1 MGP_WSBEiJ_G0007237.1 mouse_genomes_project 8 87942338 87943337 + 4930535O05Rik lincRNA lincRNA MGP_WSBEiJ_T0015452.1 MGP_WSBEiJ_G0013582.1 mouse_genomes_project 8 26403307 26404295 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089057.1 MGP_WSBEiJ_G0033244.1 mouse_genomes_project 8 111866258 111875621 + MGP_WSBEiJ_P0089057 Tat protein_coding protein_coding MGP_WSBEiJ_T0089058.1 MGP_WSBEiJ_G0033244.1 mouse_genomes_project 8 111866327 111870512 + MGP_WSBEiJ_P0089058 Tat protein_coding protein_coding MGP_WSBEiJ_T0088080.1 MGP_WSBEiJ_G0032916.1 mouse_genomes_project 8 72565894 72581995 + MGP_WSBEiJ_P0088080 Tmem38a protein_coding protein_coding MGP_WSBEiJ_T0008997.1 MGP_WSBEiJ_G0007242.1 mouse_genomes_project 8 88559383 88640096 - lincRNA lincRNA MGP_WSBEiJ_T0087980.1 MGP_WSBEiJ_G0032884.1 mouse_genomes_project 8 71484642 71490488 - MGP_WSBEiJ_P0087980 Nxnl1 protein_coding protein_coding MGP_WSBEiJ_T0087981.1 MGP_WSBEiJ_G0032884.1 mouse_genomes_project 8 71484642 71490536 - MGP_WSBEiJ_P0087981 Nxnl1 protein_coding protein_coding MGP_WSBEiJ_T0087871.1 MGP_WSBEiJ_G0032844.1 mouse_genomes_project 8 70494991 70498959 + MGP_WSBEiJ_P0087871 Lrrc25 protein_coding protein_coding MGP_WSBEiJ_T0088473.1 MGP_WSBEiJ_G0033034.1 mouse_genomes_project 8 86151778 86282129 - MGP_WSBEiJ_P0088473 Itfg1 protein_coding protein_coding MGP_WSBEiJ_T0088474.1 MGP_WSBEiJ_G0033034.1 mouse_genomes_project 8 86153089 86281918 - MGP_WSBEiJ_P0088474 Itfg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086949.1 MGP_WSBEiJ_G0032559.1 mouse_genomes_project 8 19145367 19146498 - MGP_WSBEiJ_P0086949 protein_coding protein_coding MGP_WSBEiJ_T0087239.1 MGP_WSBEiJ_G0032667.1 mouse_genomes_project 8 33326169 33470381 - MGP_WSBEiJ_P0087239 Tnks protein_coding protein_coding MGP_WSBEiJ_T0088229.1 MGP_WSBEiJ_G0032968.1 mouse_genomes_project 8 84030036 84038171 + MGP_WSBEiJ_P0088229 Ddx39 protein_coding protein_coding MGP_WSBEiJ_T0088230.1 MGP_WSBEiJ_G0032968.1 mouse_genomes_project 8 84030127 84038097 + Ddx39 protein_coding retained_intron MGP_WSBEiJ_T0088231.1 MGP_WSBEiJ_G0032968.1 mouse_genomes_project 8 84030127 84038098 + MGP_WSBEiJ_P0088231 Ddx39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088232.1 MGP_WSBEiJ_G0032968.1 mouse_genomes_project 8 84030131 84043026 + MGP_WSBEiJ_P0088232 Ddx39 protein_coding protein_coding MGP_WSBEiJ_T0088233.1 MGP_WSBEiJ_G0032968.1 mouse_genomes_project 8 84030407 84038171 + MGP_WSBEiJ_P0088233 Ddx39 protein_coding protein_coding MGP_WSBEiJ_T0088234.1 MGP_WSBEiJ_G0032968.1 mouse_genomes_project 8 84034439 84036117 + Ddx39 protein_coding retained_intron MGP_WSBEiJ_T0008977.1 MGP_WSBEiJ_G0007229.1 mouse_genomes_project 8 87345417 87346296 + 2010110E17Rik lincRNA lincRNA MGP_WSBEiJ_T0087621.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65331991 66247176 + protein_coding processed_transcript MGP_WSBEiJ_T0087622.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65332100 66246587 + MGP_WSBEiJ_P0087622 protein_coding protein_coding MGP_WSBEiJ_T0087623.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65332116 66246929 + MGP_WSBEiJ_P0087623 protein_coding protein_coding MGP_WSBEiJ_T0087624.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65332128 65696005 + protein_coding retained_intron MGP_WSBEiJ_T0087625.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65332177 66248850 + MGP_WSBEiJ_P0087625 protein_coding protein_coding MGP_WSBEiJ_T0087626.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65332616 66247640 + MGP_WSBEiJ_P0087626 protein_coding protein_coding MGP_WSBEiJ_T0087627.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65694833 66248838 + MGP_WSBEiJ_P0087627 protein_coding protein_coding MGP_WSBEiJ_T0087628.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65871827 66248838 + MGP_WSBEiJ_P0087628 protein_coding protein_coding MGP_WSBEiJ_T0087629.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 65871827 66248838 + MGP_WSBEiJ_P0087629 protein_coding protein_coding MGP_WSBEiJ_T0087630.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 66158599 66247634 + MGP_WSBEiJ_P0087630 protein_coding protein_coding MGP_WSBEiJ_T0087631.1 MGP_WSBEiJ_G0032780.1 mouse_genomes_project 8 66158606 66247644 + MGP_WSBEiJ_P0087631 protein_coding protein_coding MGP_WSBEiJ_T0009026.1 MGP_WSBEiJ_G0007260.1 mouse_genomes_project 8 108271992 108282615 + 1110028F18Rik lincRNA lincRNA MGP_WSBEiJ_T0015456.1 MGP_WSBEiJ_G0013586.1 mouse_genomes_project 8 33653248 33653781 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096861.1 MGP_WSBEiJ_G0035542.1 mouse_genomes_project 8 123842477 123843567 + pseudogene pseudogene MGP_WSBEiJ_T0005329.1 MGP_WSBEiJ_G0004515.1 mouse_genomes_project 8 128848884 128861387 + A730098A19Rik antisense antisense MGP_WSBEiJ_T0088585.1 MGP_WSBEiJ_G0033067.1 mouse_genomes_project 8 93626998 93627999 + MGP_WSBEiJ_P0088585 Capns2 protein_coding protein_coding MGP_WSBEiJ_T0099763.1 MGP_WSBEiJ_G0038426.1 mouse_genomes_project 8 11649504 11649635 - Gm26184 snoRNA snoRNA MGP_WSBEiJ_T0010817.1 MGP_WSBEiJ_G0008974.1 mouse_genomes_project 8 104060796 104060891 - Gm26301 miRNA miRNA MGP_WSBEiJ_T0005312.1 MGP_WSBEiJ_G0004499.1 mouse_genomes_project 8 116563618 116574636 - 4933408N05Rik antisense antisense MGP_WSBEiJ_T0009005.1 MGP_WSBEiJ_G0007248.1 mouse_genomes_project 8 93033086 93062900 - Crnde lincRNA lincRNA MGP_WSBEiJ_T0009006.1 MGP_WSBEiJ_G0007248.1 mouse_genomes_project 8 93033086 93062611 - Crnde lincRNA lincRNA MGP_WSBEiJ_T0009007.1 MGP_WSBEiJ_G0007248.1 mouse_genomes_project 8 93033086 93053711 - Crnde lincRNA lincRNA MGP_WSBEiJ_T0009008.1 MGP_WSBEiJ_G0007248.1 mouse_genomes_project 8 93033298 93062671 - Crnde lincRNA lincRNA MGP_WSBEiJ_T0009009.1 MGP_WSBEiJ_G0007248.1 mouse_genomes_project 8 93043129 93062544 - Crnde lincRNA lincRNA MGP_WSBEiJ_T0009011.1 MGP_WSBEiJ_G0007248.1 mouse_genomes_project 8 93051772 93053711 - Crnde lincRNA lincRNA MGP_WSBEiJ_T0009012.1 MGP_WSBEiJ_G0007248.1 mouse_genomes_project 8 93053771 93062649 - Crnde lincRNA lincRNA MGP_WSBEiJ_T0010805.1 MGP_WSBEiJ_G0008962.1 mouse_genomes_project 8 84557062 84557145 - Mir3074-2 miRNA miRNA MGP_WSBEiJ_T0010785.1 MGP_WSBEiJ_G0008942.1 mouse_genomes_project 8 67427724 67427817 - Gm44391 miRNA miRNA MGP_WSBEiJ_T0089559.1 MGP_WSBEiJ_G0033394.1 mouse_genomes_project 8 126811470 126844637 - MGP_WSBEiJ_P0089559 Abcb10 protein_coding protein_coding MGP_WSBEiJ_T0088073.1 MGP_WSBEiJ_G0032912.1 mouse_genomes_project 8 72447518 72462417 - MGP_WSBEiJ_P0088073 Cherp protein_coding protein_coding MGP_WSBEiJ_T0087881.1 MGP_WSBEiJ_G0032851.1 mouse_genomes_project 8 70625628 70652143 + MGP_WSBEiJ_P0087881 Pde4c protein_coding protein_coding MGP_WSBEiJ_T0087882.1 MGP_WSBEiJ_G0032851.1 mouse_genomes_project 8 70625972 70657264 + MGP_WSBEiJ_P0087882 Pde4c protein_coding protein_coding MGP_WSBEiJ_T0087883.1 MGP_WSBEiJ_G0032851.1 mouse_genomes_project 8 70625973 70657249 + MGP_WSBEiJ_P0087883 Pde4c protein_coding protein_coding MGP_WSBEiJ_T0087884.1 MGP_WSBEiJ_G0032851.1 mouse_genomes_project 8 70633257 70651990 + Pde4c protein_coding processed_transcript MGP_WSBEiJ_T0087885.1 MGP_WSBEiJ_G0032851.1 mouse_genomes_project 8 70649175 70656561 + Pde4c protein_coding retained_intron MGP_WSBEiJ_T0087886.1 MGP_WSBEiJ_G0032851.1 mouse_genomes_project 8 70653979 70656901 + Pde4c protein_coding retained_intron MGP_WSBEiJ_T0008961.1 MGP_WSBEiJ_G0007215.1 mouse_genomes_project 8 70682900 70683909 + 2010320M18Rik lincRNA lincRNA MGP_WSBEiJ_T0087905.1 MGP_WSBEiJ_G0032862.1 mouse_genomes_project 8 70794063 70803963 - MGP_WSBEiJ_P0087905 Slc5a5 protein_coding protein_coding MGP_WSBEiJ_T0089366.1 MGP_WSBEiJ_G0033342.1 mouse_genomes_project 8 124354621 124415221 - MGP_WSBEiJ_P0089366 Zcchc14 protein_coding protein_coding MGP_WSBEiJ_T0089367.1 MGP_WSBEiJ_G0033342.1 mouse_genomes_project 8 124356271 124362323 - MGP_WSBEiJ_P0089367 Zcchc14 protein_coding protein_coding MGP_WSBEiJ_T0089368.1 MGP_WSBEiJ_G0033342.1 mouse_genomes_project 8 124364022 124365027 - Zcchc14 protein_coding retained_intron MGP_WSBEiJ_T0089369.1 MGP_WSBEiJ_G0033342.1 mouse_genomes_project 8 124367439 124390097 - Zcchc14 protein_coding retained_intron MGP_WSBEiJ_T0087689.1 MGP_WSBEiJ_G0032797.1 mouse_genomes_project 8 69032137 69055056 + MGP_WSBEiJ_P0087689 Zfp930 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087690.1 MGP_WSBEiJ_G0032797.1 mouse_genomes_project 8 69052418 69055056 + MGP_WSBEiJ_P0087690 Zfp930 protein_coding protein_coding MGP_WSBEiJ_T0015458.1 MGP_WSBEiJ_G0013588.1 mouse_genomes_project 8 36830519 36833423 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008951.1 MGP_WSBEiJ_G0007206.1 mouse_genomes_project 8 46376773 46540947 - lincRNA lincRNA MGP_WSBEiJ_T0089103.1 MGP_WSBEiJ_G0033261.1 mouse_genomes_project 8 112996346 113000153 + MGP_WSBEiJ_P0089103 Aars protein_coding protein_coding MGP_WSBEiJ_T0089104.1 MGP_WSBEiJ_G0033261.1 mouse_genomes_project 8 112997081 113008324 + Aars protein_coding retained_intron MGP_WSBEiJ_T0089105.1 MGP_WSBEiJ_G0033261.1 mouse_genomes_project 8 112997104 113020862 + MGP_WSBEiJ_P0089105 Aars protein_coding protein_coding MGP_WSBEiJ_T0089106.1 MGP_WSBEiJ_G0033261.1 mouse_genomes_project 8 112997118 113009943 + Aars protein_coding retained_intron MGP_WSBEiJ_T0089107.1 MGP_WSBEiJ_G0033261.1 mouse_genomes_project 8 113004927 113006011 + Aars protein_coding retained_intron MGP_WSBEiJ_T0089108.1 MGP_WSBEiJ_G0033261.1 mouse_genomes_project 8 113006280 113008322 + Aars protein_coding retained_intron MGP_WSBEiJ_T0089109.1 MGP_WSBEiJ_G0033261.1 mouse_genomes_project 8 113011111 113013203 + Aars protein_coding retained_intron MGP_WSBEiJ_T0099774.1 MGP_WSBEiJ_G0038437.1 mouse_genomes_project 8 29489453 29489557 - Snord13 snoRNA snoRNA MGP_WSBEiJ_T0002282.1 MGP_WSBEiJ_G0002200.1 mouse_genomes_project 8 10591027 10592111 - TEC TEC MGP_WSBEiJ_T0089256.1 MGP_WSBEiJ_G0033313.1 mouse_genomes_project 8 122124659 122140143 - MGP_WSBEiJ_P0089256 Hsdl1 protein_coding protein_coding MGP_WSBEiJ_T0088891.1 MGP_WSBEiJ_G0033181.1 mouse_genomes_project 8 107304510 107314391 + MGP_WSBEiJ_P0088891 Rltpr protein_coding unknown_likely_coding MGP_WSBEiJ_T0088892.1 MGP_WSBEiJ_G0033181.1 mouse_genomes_project 8 107311653 107318942 + MGP_WSBEiJ_P0088892 Rltpr protein_coding protein_coding MGP_WSBEiJ_T0088893.1 MGP_WSBEiJ_G0033181.1 mouse_genomes_project 8 107314630 107318967 + MGP_WSBEiJ_P0088893 Rltpr protein_coding unknown_likely_coding MGP_WSBEiJ_T0087010.1 MGP_WSBEiJ_G0032591.1 mouse_genomes_project 8 20742986 20761230 - MGP_WSBEiJ_P0087010 Ap3m2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087154.1 MGP_WSBEiJ_G0032632.1 mouse_genomes_project 8 25228550 25242099 + MGP_WSBEiJ_P0087154 Prosc protein_coding protein_coding MGP_WSBEiJ_T0087155.1 MGP_WSBEiJ_G0032632.1 mouse_genomes_project 8 25228550 25236207 + MGP_WSBEiJ_P0087155 Prosc protein_coding protein_coding MGP_WSBEiJ_T0087697.1 MGP_WSBEiJ_G0032800.1 mouse_genomes_project 8 69472457 69482555 + Zfp964 protein_coding retained_intron MGP_WSBEiJ_T0087698.1 MGP_WSBEiJ_G0032800.1 mouse_genomes_project 8 69472470 69487765 + MGP_WSBEiJ_P0087698 Zfp964 protein_coding protein_coding MGP_WSBEiJ_T0087699.1 MGP_WSBEiJ_G0032800.1 mouse_genomes_project 8 69478943 69483836 + MGP_WSBEiJ_P0087699 Zfp964 protein_coding protein_coding MGP_WSBEiJ_T0088899.1 MGP_WSBEiJ_G0033186.1 mouse_genomes_project 8 107335884 107394149 - MGP_WSBEiJ_P0088899 Gfod2 protein_coding protein_coding MGP_WSBEiJ_T0088900.1 MGP_WSBEiJ_G0033186.1 mouse_genomes_project 8 107339461 107394115 - MGP_WSBEiJ_P0088900 Gfod2 protein_coding protein_coding MGP_WSBEiJ_T0088901.1 MGP_WSBEiJ_G0033186.1 mouse_genomes_project 8 107353477 107394081 - Gfod2 protein_coding processed_transcript MGP_WSBEiJ_T0089528.1 MGP_WSBEiJ_G0033380.1 mouse_genomes_project 8 126167012 126203825 + MGP_WSBEiJ_P0089528 Spire2 protein_coding protein_coding MGP_WSBEiJ_T0015473.1 MGP_WSBEiJ_G0013603.1 mouse_genomes_project 8 75365706 75366438 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087198.1 MGP_WSBEiJ_G0032655.1 mouse_genomes_project 8 32015171 32036117 + MGP_WSBEiJ_P0087198 Ppp2cb protein_coding protein_coding MGP_WSBEiJ_T0087132.1 MGP_WSBEiJ_G0032623.1 mouse_genomes_project 8 23968983 24056665 + MGP_WSBEiJ_P0087132 Kcnu1 protein_coding protein_coding MGP_WSBEiJ_T0087133.1 MGP_WSBEiJ_G0032623.1 mouse_genomes_project 8 24025758 24056666 + MGP_WSBEiJ_P0087133 Kcnu1 protein_coding protein_coding MGP_WSBEiJ_T0087134.1 MGP_WSBEiJ_G0032623.1 mouse_genomes_project 8 24025770 24036916 + MGP_WSBEiJ_P0087134 Kcnu1 protein_coding protein_coding MGP_WSBEiJ_T0010795.1 MGP_WSBEiJ_G0008952.1 mouse_genomes_project 8 84261373 84261487 - Gm44450 miRNA miRNA MGP_WSBEiJ_T0008976.1 MGP_WSBEiJ_G0007228.1 mouse_genomes_project 8 85051719 85056043 + Gm26664 lincRNA lincRNA MGP_WSBEiJ_T0088453.1 MGP_WSBEiJ_G0033024.1 mouse_genomes_project 8 85508870 85524954 + MGP_WSBEiJ_P0088453 Man2b1 protein_coding protein_coding MGP_WSBEiJ_T0086813.1 MGP_WSBEiJ_G0032504.1 mouse_genomes_project 8 10416759 10462389 + MGP_WSBEiJ_P0086813 Cul4a protein_coding protein_coding MGP_WSBEiJ_T0086814.1 MGP_WSBEiJ_G0032504.1 mouse_genomes_project 8 10416878 10436180 + MGP_WSBEiJ_P0086814 Cul4a protein_coding protein_coding MGP_WSBEiJ_T0086815.1 MGP_WSBEiJ_G0032504.1 mouse_genomes_project 8 10417074 10433701 + Cul4a protein_coding retained_intron MGP_WSBEiJ_T0086816.1 MGP_WSBEiJ_G0032504.1 mouse_genomes_project 8 10435482 10461811 + MGP_WSBEiJ_P0086816 Cul4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086817.1 MGP_WSBEiJ_G0032504.1 mouse_genomes_project 8 10454088 10456947 + Cul4a protein_coding retained_intron MGP_WSBEiJ_T0086818.1 MGP_WSBEiJ_G0032504.1 mouse_genomes_project 8 10454656 10461068 + Cul4a protein_coding processed_transcript MGP_WSBEiJ_T0086819.1 MGP_WSBEiJ_G0032504.1 mouse_genomes_project 8 10458561 10462389 + Cul4a protein_coding retained_intron MGP_WSBEiJ_T0087463.1 MGP_WSBEiJ_G0032730.1 mouse_genomes_project 8 46815064 46819652 - MGP_WSBEiJ_P0087463 Cdkn2aip protein_coding protein_coding MGP_WSBEiJ_T0098535.1 MGP_WSBEiJ_G0037198.1 mouse_genomes_project 8 41650846 41650952 + Gm26181 snRNA snRNA MGP_WSBEiJ_T0010762.1 MGP_WSBEiJ_G0008919.1 mouse_genomes_project 8 6924287 6924440 - miRNA miRNA MGP_WSBEiJ_T0088528.1 MGP_WSBEiJ_G0033047.1 mouse_genomes_project 8 88872369 88874263 - Brd7 protein_coding processed_transcript MGP_WSBEiJ_T0088529.1 MGP_WSBEiJ_G0033047.1 mouse_genomes_project 8 88872375 88907689 - MGP_WSBEiJ_P0088529 Brd7 protein_coding protein_coding MGP_WSBEiJ_T0088530.1 MGP_WSBEiJ_G0033047.1 mouse_genomes_project 8 88874130 88875266 - Brd7 protein_coding processed_transcript MGP_WSBEiJ_T0088531.1 MGP_WSBEiJ_G0033047.1 mouse_genomes_project 8 88874149 88876831 - Brd7 protein_coding retained_intron MGP_WSBEiJ_T0088532.1 MGP_WSBEiJ_G0033047.1 mouse_genomes_project 8 88874229 88884170 - Brd7 protein_coding processed_transcript MGP_WSBEiJ_T0088533.1 MGP_WSBEiJ_G0033047.1 mouse_genomes_project 8 88874893 88884092 - Brd7 protein_coding processed_transcript MGP_WSBEiJ_T0088534.1 MGP_WSBEiJ_G0033047.1 mouse_genomes_project 8 88901378 88907512 - Brd7 protein_coding processed_transcript MGP_WSBEiJ_T0011524.1 MGP_WSBEiJ_G0009681.1 mouse_genomes_project 8 91851559 91851824 - Gm23408 misc_RNA misc_RNA MGP_WSBEiJ_T0089529.1 MGP_WSBEiJ_G0033381.1 mouse_genomes_project 8 126208145 126237991 + MGP_WSBEiJ_P0089529 Tcf25 protein_coding protein_coding MGP_WSBEiJ_T0089530.1 MGP_WSBEiJ_G0033381.1 mouse_genomes_project 8 126208156 126240273 + MGP_WSBEiJ_P0089530 Tcf25 protein_coding protein_coding MGP_WSBEiJ_T0015471.1 MGP_WSBEiJ_G0013601.1 mouse_genomes_project 8 72520523 72520700 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087612.1 MGP_WSBEiJ_G0032775.1 mouse_genomes_project 8 64683857 64716304 + MGP_WSBEiJ_P0087612 Tmem192 protein_coding protein_coding MGP_WSBEiJ_T0087613.1 MGP_WSBEiJ_G0032775.1 mouse_genomes_project 8 64683857 64716304 + MGP_WSBEiJ_P0087613 Tmem192 protein_coding protein_coding MGP_WSBEiJ_T0087171.1 MGP_WSBEiJ_G0032642.1 mouse_genomes_project 8 26883366 27467948 - MGP_WSBEiJ_P0087171 Unc5d protein_coding protein_coding MGP_WSBEiJ_T0087172.1 MGP_WSBEiJ_G0032642.1 mouse_genomes_project 8 26889429 27091644 - MGP_WSBEiJ_P0087172 Unc5d protein_coding unknown_likely_coding MGP_WSBEiJ_T0098553.1 MGP_WSBEiJ_G0037216.1 mouse_genomes_project 8 82410134 82410197 - Gm25267 snRNA snRNA MGP_WSBEiJ_T0097108.1 MGP_WSBEiJ_G0035789.1 mouse_genomes_project 8 12848761 12848854 + Gm24222 rRNA rRNA MGP_WSBEiJ_T0088350.1 MGP_WSBEiJ_G0032999.1 mouse_genomes_project 8 85213392 85221333 - MGP_WSBEiJ_P0088350 Dand5 protein_coding protein_coding MGP_WSBEiJ_T0096852.1 MGP_WSBEiJ_G0035533.1 mouse_genomes_project 8 33469745 33470900 + pseudogene pseudogene MGP_WSBEiJ_T0089449.1 MGP_WSBEiJ_G0033361.1 mouse_genomes_project 8 125382412 125382737 + MGP_WSBEiJ_P0089449 protein_coding protein_coding MGP_WSBEiJ_T0087186.1 MGP_WSBEiJ_G0032648.1 mouse_genomes_project 8 30076429 30079144 - MGP_WSBEiJ_P0087186 protein_coding protein_coding MGP_WSBEiJ_T0088049.1 MGP_WSBEiJ_G0032899.1 mouse_genomes_project 8 72064288 72073641 + MGP_WSBEiJ_P0088049 Olfr373 protein_coding protein_coding MGP_WSBEiJ_T0088847.1 MGP_WSBEiJ_G0033164.1 mouse_genomes_project 8 106879955 106886130 - MGP_WSBEiJ_P0088847 Exoc3l protein_coding protein_coding MGP_WSBEiJ_T0009002.1 MGP_WSBEiJ_G0007245.1 mouse_genomes_project 8 92548268 92555466 + Gm28511 lincRNA lincRNA MGP_WSBEiJ_T0089268.1 MGP_WSBEiJ_G0033320.1 mouse_genomes_project 8 122341198 122359015 - MGP_WSBEiJ_P0089268 Tldc1 protein_coding protein_coding MGP_WSBEiJ_T0089134.1 MGP_WSBEiJ_G0033268.1 mouse_genomes_project 8 113455549 113532904 - MGP_WSBEiJ_P0089134 Wdr59 protein_coding protein_coding MGP_WSBEiJ_T0089135.1 MGP_WSBEiJ_G0033268.1 mouse_genomes_project 8 113455549 113532904 - MGP_WSBEiJ_P0089135 Wdr59 protein_coding protein_coding MGP_WSBEiJ_T0099786.1 MGP_WSBEiJ_G0038449.1 mouse_genomes_project 8 62433694 62433808 + Gm22324 snoRNA snoRNA MGP_WSBEiJ_T0088696.1 MGP_WSBEiJ_G0033104.1 mouse_genomes_project 8 95836146 95849325 + MGP_WSBEiJ_P0088696 Adgrg5 protein_coding protein_coding MGP_WSBEiJ_T0088697.1 MGP_WSBEiJ_G0033104.1 mouse_genomes_project 8 95836146 95858022 + MGP_WSBEiJ_P0088697 Adgrg5 protein_coding protein_coding MGP_WSBEiJ_T0088698.1 MGP_WSBEiJ_G0033104.1 mouse_genomes_project 8 95836146 95858032 + MGP_WSBEiJ_P0088698 Adgrg5 protein_coding protein_coding MGP_WSBEiJ_T0088699.1 MGP_WSBEiJ_G0033104.1 mouse_genomes_project 8 95836151 95858022 + MGP_WSBEiJ_P0088699 Adgrg5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088700.1 MGP_WSBEiJ_G0033104.1 mouse_genomes_project 8 95848975 95849893 + Adgrg5 protein_coding processed_transcript MGP_WSBEiJ_T0008927.1 MGP_WSBEiJ_G0007186.1 mouse_genomes_project 8 20341592 20342468 + 1810012K16Rik lincRNA lincRNA MGP_WSBEiJ_T0089068.1 MGP_WSBEiJ_G0033252.1 mouse_genomes_project 8 112551633 112653033 + MGP_WSBEiJ_P0089068 Vac14 protein_coding protein_coding MGP_WSBEiJ_T0010761.1 MGP_WSBEiJ_G0008918.1 mouse_genomes_project 8 5810215 5810285 - Mir7654 miRNA miRNA MGP_WSBEiJ_T0088783.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106028969 106043333 - Nae1 protein_coding processed_transcript MGP_WSBEiJ_T0088784.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106028969 106056259 - MGP_WSBEiJ_P0088784 Nae1 protein_coding protein_coding MGP_WSBEiJ_T0088785.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106028969 106056258 - MGP_WSBEiJ_P0088785 Nae1 protein_coding protein_coding MGP_WSBEiJ_T0088786.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106028975 106037155 - Nae1 protein_coding retained_intron MGP_WSBEiJ_T0088787.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106028978 106038209 - Nae1 protein_coding retained_intron MGP_WSBEiJ_T0088788.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106031135 106037215 - Nae1 protein_coding retained_intron MGP_WSBEiJ_T0088789.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106037702 106048054 - Nae1 protein_coding retained_intron MGP_WSBEiJ_T0088790.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106039863 106043365 - Nae1 protein_coding retained_intron MGP_WSBEiJ_T0088791.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106043056 106056210 - Nae1 protein_coding retained_intron MGP_WSBEiJ_T0088792.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106043485 106047476 - Nae1 protein_coding retained_intron MGP_WSBEiJ_T0088793.1 MGP_WSBEiJ_G0033140.1 mouse_genomes_project 8 106048169 106056236 - Nae1 protein_coding retained_intron MGP_WSBEiJ_T0017855.1 MGP_WSBEiJ_G0015132.1 mouse_genomes_project 8 40052860 40057275 + Gm16348 processed_transcript processed_transcript MGP_WSBEiJ_T0017856.1 MGP_WSBEiJ_G0015132.1 mouse_genomes_project 8 40052861 40056907 + Gm16348 processed_transcript processed_transcript MGP_WSBEiJ_T0088217.1 MGP_WSBEiJ_G0032965.1 mouse_genomes_project 8 83961438 83975426 + MGP_WSBEiJ_P0088217 Gipc1 protein_coding protein_coding MGP_WSBEiJ_T0087637.1 MGP_WSBEiJ_G0032783.1 mouse_genomes_project 8 66450278 66459395 - MGP_WSBEiJ_P0087637 Npy5r protein_coding protein_coding MGP_WSBEiJ_T0086958.1 MGP_WSBEiJ_G0032568.1 mouse_genomes_project 8 19768484 19768889 - MGP_WSBEiJ_P0086958 Defb9 protein_coding protein_coding MGP_WSBEiJ_T0088374.1 MGP_WSBEiJ_G0033006.1 mouse_genomes_project 8 85295483 85302590 - MGP_WSBEiJ_P0088374 Gcdh protein_coding protein_coding MGP_WSBEiJ_T0088375.1 MGP_WSBEiJ_G0033006.1 mouse_genomes_project 8 85299642 85302194 - Gcdh protein_coding retained_intron MGP_WSBEiJ_T0088376.1 MGP_WSBEiJ_G0033006.1 mouse_genomes_project 8 85299841 85301576 - Gcdh protein_coding retained_intron MGP_WSBEiJ_T0088377.1 MGP_WSBEiJ_G0033006.1 mouse_genomes_project 8 85301560 85302384 - Gcdh protein_coding retained_intron MGP_WSBEiJ_T0088378.1 MGP_WSBEiJ_G0033006.1 mouse_genomes_project 8 85302003 85302830 - MGP_WSBEiJ_P0088378 Gcdh protein_coding protein_coding MGP_WSBEiJ_T0087169.1 MGP_WSBEiJ_G0032640.1 mouse_genomes_project 8 25624611 25636243 - MGP_WSBEiJ_P0087169 Chrna6 protein_coding protein_coding MGP_WSBEiJ_T0017894.1 MGP_WSBEiJ_G0015147.1 mouse_genomes_project 8 127729091 127754610 + Gm16163 processed_transcript processed_transcript MGP_WSBEiJ_T0089012.1 MGP_WSBEiJ_G0033227.1 mouse_genomes_project 8 109153768 109168951 - MGP_WSBEiJ_P0089012 Nqo1 protein_coding protein_coding MGP_WSBEiJ_T0087988.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71521577 71533878 + MGP_WSBEiJ_P0087988 Fam129c protein_coding unknown_likely_coding MGP_WSBEiJ_T0087989.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71522488 71533665 + MGP_WSBEiJ_P0087989 Fam129c protein_coding protein_coding MGP_WSBEiJ_T0087990.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71522604 71533653 + Fam129c protein_coding retained_intron MGP_WSBEiJ_T0087991.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71525562 71527469 + Fam129c protein_coding processed_transcript MGP_WSBEiJ_T0087992.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71526296 71527962 + Fam129c protein_coding retained_intron MGP_WSBEiJ_T0087993.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71527994 71528671 + Fam129c protein_coding retained_intron MGP_WSBEiJ_T0087994.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71528078 71533653 + Fam129c protein_coding retained_intron MGP_WSBEiJ_T0087995.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71530472 71533300 + MGP_WSBEiJ_P0087995 Fam129c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087996.1 MGP_WSBEiJ_G0032887.1 mouse_genomes_project 8 71530689 71533662 + MGP_WSBEiJ_P0087996 Fam129c protein_coding protein_coding MGP_WSBEiJ_T0015493.1 MGP_WSBEiJ_G0013623.1 mouse_genomes_project 8 100205236 100207940 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088068.1 MGP_WSBEiJ_G0032910.1 mouse_genomes_project 8 72405856 72426570 - MGP_WSBEiJ_P0088068 Calr3 protein_coding protein_coding MGP_WSBEiJ_T0088069.1 MGP_WSBEiJ_G0032910.1 mouse_genomes_project 8 72405863 72415988 - MGP_WSBEiJ_P0088069 Calr3 protein_coding protein_coding MGP_WSBEiJ_T0086592.1 MGP_WSBEiJ_G0032441.1 mouse_genomes_project 8 519037 541463 + MGP_WSBEiJ_P0086592 Camsap3 protein_coding protein_coding MGP_WSBEiJ_T0086593.1 MGP_WSBEiJ_G0032441.1 mouse_genomes_project 8 519037 541463 + MGP_WSBEiJ_P0086593 Camsap3 protein_coding protein_coding MGP_WSBEiJ_T0086594.1 MGP_WSBEiJ_G0032441.1 mouse_genomes_project 8 519394 541438 + MGP_WSBEiJ_P0086594 Camsap3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088950.1 MGP_WSBEiJ_G0033206.1 mouse_genomes_project 8 107844137 107873375 + MGP_WSBEiJ_P0088950 Slc7a6 protein_coding protein_coding MGP_WSBEiJ_T0015481.1 MGP_WSBEiJ_G0013611.1 mouse_genomes_project 8 81515713 81516686 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086756.1 MGP_WSBEiJ_G0032493.1 mouse_genomes_project 8 9549862 9551701 + MGP_WSBEiJ_P0086756 A230072I06Rik protein_coding protein_coding MGP_WSBEiJ_T0088106.1 MGP_WSBEiJ_G0032924.1 mouse_genomes_project 8 75064181 75071037 + MGP_WSBEiJ_P0088106 Hmox1 protein_coding protein_coding MGP_WSBEiJ_T0088107.1 MGP_WSBEiJ_G0032924.1 mouse_genomes_project 8 75064231 75066887 + Hmox1 protein_coding retained_intron MGP_WSBEiJ_T0088108.1 MGP_WSBEiJ_G0032924.1 mouse_genomes_project 8 75064440 75067640 + MGP_WSBEiJ_P0088108 Hmox1 protein_coding protein_coding MGP_WSBEiJ_T0088341.1 MGP_WSBEiJ_G0032996.1 mouse_genomes_project 8 85096788 85105048 - Nfix protein_coding processed_transcript MGP_WSBEiJ_T0088343.1 MGP_WSBEiJ_G0032996.1 mouse_genomes_project 8 85101619 85104546 - Nfix protein_coding processed_transcript MGP_WSBEiJ_T0088344.1 MGP_WSBEiJ_G0032996.1 mouse_genomes_project 8 85101619 85170364 - MGP_WSBEiJ_P0088344 Nfix protein_coding protein_coding MGP_WSBEiJ_T0088345.1 MGP_WSBEiJ_G0032996.1 mouse_genomes_project 8 85101620 85169338 - MGP_WSBEiJ_P0088345 Nfix protein_coding protein_coding MGP_WSBEiJ_T0088346.1 MGP_WSBEiJ_G0032996.1 mouse_genomes_project 8 85105443 85197327 - MGP_WSBEiJ_P0088346 Nfix protein_coding protein_coding MGP_WSBEiJ_T0088347.1 MGP_WSBEiJ_G0032996.1 mouse_genomes_project 8 85105464 85110896 - Nfix protein_coding retained_intron MGP_WSBEiJ_T0088348.1 MGP_WSBEiJ_G0032996.1 mouse_genomes_project 8 85110622 85197211 - MGP_WSBEiJ_P0088348 Nfix protein_coding protein_coding MGP_WSBEiJ_T0086695.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428411 1455080 + MGP_WSBEiJ_P0086695 Cers4 protein_coding protein_coding MGP_WSBEiJ_T0086696.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428525 1452157 + MGP_WSBEiJ_P0086696 Cers4 protein_coding protein_coding MGP_WSBEiJ_T0086697.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428584 1468096 + MGP_WSBEiJ_P0086697 Cers4 protein_coding protein_coding MGP_WSBEiJ_T0086698.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428787 1460108 + MGP_WSBEiJ_P0086698 Cers4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086699.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428834 1461538 + Cers4 protein_coding retained_intron MGP_WSBEiJ_T0086700.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428837 1461380 + MGP_WSBEiJ_P0086700 Cers4 protein_coding protein_coding MGP_WSBEiJ_T0086701.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428843 1458883 + Cers4 protein_coding retained_intron MGP_WSBEiJ_T0086702.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428867 1458974 + Cers4 protein_coding retained_intron MGP_WSBEiJ_T0086703.1 MGP_WSBEiJ_G0032468.1 mouse_genomes_project 8 1428906 1456949 + Cers4 protein_coding retained_intron MGP_WSBEiJ_T0089052.1 MGP_WSBEiJ_G0033242.1 mouse_genomes_project 8 111735390 111776438 + Phlpp2 protein_coding retained_intron MGP_WSBEiJ_T0089053.1 MGP_WSBEiJ_G0033242.1 mouse_genomes_project 8 111735435 111816102 + MGP_WSBEiJ_P0089053 Phlpp2 protein_coding protein_coding MGP_WSBEiJ_T0087183.1 MGP_WSBEiJ_G0032647.1 mouse_genomes_project 8 29524822 29575974 + MGP_WSBEiJ_P0087183 Fut10 protein_coding protein_coding MGP_WSBEiJ_T0087184.1 MGP_WSBEiJ_G0032647.1 mouse_genomes_project 8 29524830 29597685 + MGP_WSBEiJ_P0087184 Fut10 protein_coding protein_coding MGP_WSBEiJ_T0087185.1 MGP_WSBEiJ_G0032647.1 mouse_genomes_project 8 29540246 29574209 + Fut10 protein_coding processed_transcript MGP_WSBEiJ_T0010826.1 MGP_WSBEiJ_G0008983.1 mouse_genomes_project 8 112430640 112430700 + miRNA miRNA MGP_WSBEiJ_T0009003.1 MGP_WSBEiJ_G0007246.1 mouse_genomes_project 8 92591090 92596587 - Gm28515 lincRNA lincRNA MGP_WSBEiJ_T0087532.1 MGP_WSBEiJ_G0032756.1 mouse_genomes_project 8 57215062 58435669 - MGP_WSBEiJ_P0087532 Galntl6 protein_coding protein_coding MGP_WSBEiJ_T0087533.1 MGP_WSBEiJ_G0032756.1 mouse_genomes_project 8 57218202 57416167 - MGP_WSBEiJ_P0087533 Galntl6 protein_coding protein_coding MGP_WSBEiJ_T0087534.1 MGP_WSBEiJ_G0032756.1 mouse_genomes_project 8 57237037 57288867 - Galntl6 protein_coding processed_transcript MGP_WSBEiJ_T0087535.1 MGP_WSBEiJ_G0032756.1 mouse_genomes_project 8 57899299 58434656 - Galntl6 protein_coding retained_intron MGP_WSBEiJ_T0087536.1 MGP_WSBEiJ_G0032756.1 mouse_genomes_project 8 57899385 58434605 - MGP_WSBEiJ_P0087536 Galntl6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087537.1 MGP_WSBEiJ_G0032756.1 mouse_genomes_project 8 57899505 58210151 - MGP_WSBEiJ_P0087537 Galntl6 protein_coding protein_coding MGP_WSBEiJ_T0087538.1 MGP_WSBEiJ_G0032756.1 mouse_genomes_project 8 57977881 58210181 - Galntl6 protein_coding processed_transcript MGP_WSBEiJ_T0087539.1 MGP_WSBEiJ_G0032756.1 mouse_genomes_project 8 58020307 58434889 - MGP_WSBEiJ_P0087539 Galntl6 protein_coding protein_coding MGP_WSBEiJ_T0087236.1 MGP_WSBEiJ_G0032664.1 mouse_genomes_project 8 32624307 32640769 + MGP_WSBEiJ_P0087236 Saraf protein_coding protein_coding MGP_WSBEiJ_T0098545.1 MGP_WSBEiJ_G0037208.1 mouse_genomes_project 8 65731305 65731412 - Gm24205 snRNA snRNA MGP_WSBEiJ_T0087830.1 MGP_WSBEiJ_G0032836.1 mouse_genomes_project 8 70365403 70376324 + MGP_WSBEiJ_P0087830 Crlf1 protein_coding protein_coding MGP_WSBEiJ_T0087831.1 MGP_WSBEiJ_G0032836.1 mouse_genomes_project 8 70365606 70373174 + MGP_WSBEiJ_P0087831 Crlf1 protein_coding protein_coding MGP_WSBEiJ_T0087832.1 MGP_WSBEiJ_G0032836.1 mouse_genomes_project 8 70373376 70376273 + MGP_WSBEiJ_P0087832 Crlf1 protein_coding protein_coding MGP_WSBEiJ_T0015428.1 MGP_WSBEiJ_G0013558.1 mouse_genomes_project 8 771565 772021 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086759.1 MGP_WSBEiJ_G0032496.1 mouse_genomes_project 8 9858920 9891855 + MGP_WSBEiJ_P0086759 Spaca7 protein_coding protein_coding MGP_WSBEiJ_T0086920.1 MGP_WSBEiJ_G0032537.1 mouse_genomes_project 8 16321500 16367686 + MGP_WSBEiJ_P0086920 Agpat5 protein_coding protein_coding MGP_WSBEiJ_T0086921.1 MGP_WSBEiJ_G0032537.1 mouse_genomes_project 8 16321502 16359756 + MGP_WSBEiJ_P0086921 Agpat5 protein_coding protein_coding MGP_WSBEiJ_T0098547.1 MGP_WSBEiJ_G0037210.1 mouse_genomes_project 8 71995697 71995855 + Gm25052 snRNA snRNA MGP_WSBEiJ_T0008960.1 MGP_WSBEiJ_G0007214.1 mouse_genomes_project 8 68014030 68020998 - lincRNA lincRNA MGP_WSBEiJ_T0011511.1 MGP_WSBEiJ_G0009668.1 mouse_genomes_project 8 4592986 4593188 + Gm27545 misc_RNA misc_RNA MGP_WSBEiJ_T0087639.1 MGP_WSBEiJ_G0032785.1 mouse_genomes_project 8 66644250 66675030 + MGP_WSBEiJ_P0087639 Naf1 protein_coding protein_coding MGP_WSBEiJ_T0087718.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69665629 69711111 + MGP_WSBEiJ_P0087718 Pbx4 protein_coding protein_coding MGP_WSBEiJ_T0087719.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69665762 69694673 + Pbx4 protein_coding retained_intron MGP_WSBEiJ_T0087720.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69665775 69711111 + MGP_WSBEiJ_P0087720 Pbx4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087721.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69665798 69709504 + MGP_WSBEiJ_P0087721 Pbx4 protein_coding protein_coding MGP_WSBEiJ_T0087722.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69665800 69711111 + MGP_WSBEiJ_P0087722 Pbx4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087723.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69665828 69711111 + MGP_WSBEiJ_P0087723 Pbx4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087724.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69680968 69701566 + Pbx4 protein_coding processed_transcript MGP_WSBEiJ_T0087725.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69702700 69709456 + Pbx4 protein_coding retained_intron MGP_WSBEiJ_T0087726.1 MGP_WSBEiJ_G0032808.1 mouse_genomes_project 8 69702895 69711111 + Pbx4 protein_coding retained_intron MGP_WSBEiJ_T0089330.1 MGP_WSBEiJ_G0033334.1 mouse_genomes_project 8 123405258 123427167 + MGP_WSBEiJ_P0089330 Irf8 protein_coding protein_coding MGP_WSBEiJ_T0089331.1 MGP_WSBEiJ_G0033334.1 mouse_genomes_project 8 123405259 123413949 + Irf8 protein_coding retained_intron MGP_WSBEiJ_T0089332.1 MGP_WSBEiJ_G0033334.1 mouse_genomes_project 8 123405285 123423951 + MGP_WSBEiJ_P0089332 Irf8 protein_coding protein_coding MGP_WSBEiJ_T0089333.1 MGP_WSBEiJ_G0033334.1 mouse_genomes_project 8 123407533 123426054 + MGP_WSBEiJ_P0089333 Irf8 protein_coding protein_coding MGP_WSBEiJ_T0089335.1 MGP_WSBEiJ_G0033334.1 mouse_genomes_project 8 123415908 123424206 + Irf8 protein_coding retained_intron MGP_WSBEiJ_T0089336.1 MGP_WSBEiJ_G0033334.1 mouse_genomes_project 8 123422643 123424184 + Irf8 protein_coding processed_transcript MGP_WSBEiJ_T0096854.1 MGP_WSBEiJ_G0035535.1 mouse_genomes_project 8 88659520 88659959 - pseudogene pseudogene MGP_WSBEiJ_T0088096.1 MGP_WSBEiJ_G0032922.1 mouse_genomes_project 8 74958677 74997831 + MGP_WSBEiJ_P0088096 Hmgxb4 protein_coding protein_coding MGP_WSBEiJ_T0088097.1 MGP_WSBEiJ_G0032922.1 mouse_genomes_project 8 74959000 74965116 + Hmgxb4 protein_coding processed_transcript MGP_WSBEiJ_T0088098.1 MGP_WSBEiJ_G0032922.1 mouse_genomes_project 8 74959000 74997837 + MGP_WSBEiJ_P0088098 Hmgxb4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088099.1 MGP_WSBEiJ_G0032922.1 mouse_genomes_project 8 74959012 74964538 + Hmgxb4 protein_coding processed_transcript MGP_WSBEiJ_T0088100.1 MGP_WSBEiJ_G0032922.1 mouse_genomes_project 8 74959033 74966102 + Hmgxb4 protein_coding retained_intron MGP_WSBEiJ_T0088101.1 MGP_WSBEiJ_G0032922.1 mouse_genomes_project 8 74964023 74995892 + MGP_WSBEiJ_P0088101 Hmgxb4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088102.1 MGP_WSBEiJ_G0032922.1 mouse_genomes_project 8 74982385 74997772 + MGP_WSBEiJ_P0088102 Hmgxb4 protein_coding protein_coding MGP_WSBEiJ_T0088103.1 MGP_WSBEiJ_G0032922.1 mouse_genomes_project 8 74989018 74990240 + Hmgxb4 protein_coding retained_intron MGP_WSBEiJ_T0087783.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70095874 70127575 + MGP_WSBEiJ_P0087783 Sugp2 protein_coding protein_coding MGP_WSBEiJ_T0087784.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70096375 70104674 + MGP_WSBEiJ_P0087784 Sugp2 protein_coding protein_coding MGP_WSBEiJ_T0087785.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70096381 70116617 + Sugp2 protein_coding retained_intron MGP_WSBEiJ_T0087786.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70098162 70104926 + MGP_WSBEiJ_P0087786 Sugp2 protein_coding protein_coding MGP_WSBEiJ_T0087787.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70105606 70120124 + Sugp2 protein_coding retained_intron MGP_WSBEiJ_T0087788.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70110034 70113720 + Sugp2 protein_coding retained_intron MGP_WSBEiJ_T0087789.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70113915 70143289 + Sugp2 protein_coding processed_transcript MGP_WSBEiJ_T0087790.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70119329 70121256 + Sugp2 protein_coding retained_intron MGP_WSBEiJ_T0087791.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70121604 70124958 + Sugp2 protein_coding processed_transcript MGP_WSBEiJ_T0087792.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70122294 70124958 + Sugp2 protein_coding retained_intron MGP_WSBEiJ_T0087793.1 MGP_WSBEiJ_G0032826.1 mouse_genomes_project 8 70136818 70143288 + Sugp2 protein_coding processed_transcript MGP_WSBEiJ_T0097109.1 MGP_WSBEiJ_G0035790.1 mouse_genomes_project 8 34350904 34351018 + Gm22216 rRNA rRNA MGP_WSBEiJ_T0088192.1 MGP_WSBEiJ_G0032952.1 mouse_genomes_project 8 82586502 82665449 - MGP_WSBEiJ_P0088192 Il15 protein_coding protein_coding MGP_WSBEiJ_T0088860.1 MGP_WSBEiJ_G0033170.1 mouse_genomes_project 8 106940411 106963062 + MGP_WSBEiJ_P0088860 Slc9a5 protein_coding protein_coding MGP_WSBEiJ_T0088053.1 MGP_WSBEiJ_G0032902.1 mouse_genomes_project 8 72136093 72160297 + MGP_WSBEiJ_P0088053 Rab8a protein_coding protein_coding MGP_WSBEiJ_T0088054.1 MGP_WSBEiJ_G0032902.1 mouse_genomes_project 8 72136206 72152265 + Rab8a protein_coding processed_transcript MGP_WSBEiJ_T0088055.1 MGP_WSBEiJ_G0032902.1 mouse_genomes_project 8 72136252 72152459 + Rab8a protein_coding retained_intron MGP_WSBEiJ_T0087346.1 MGP_WSBEiJ_G0032702.1 mouse_genomes_project 8 44232831 44254668 - MGP_WSBEiJ_P0087346 F11 protein_coding protein_coding MGP_WSBEiJ_T0008945.1 MGP_WSBEiJ_G0007200.1 mouse_genomes_project 8 32834616 32857757 + lincRNA lincRNA MGP_WSBEiJ_T0099771.1 MGP_WSBEiJ_G0038434.1 mouse_genomes_project 8 22747048 22747172 + Gm26208 snoRNA snoRNA MGP_WSBEiJ_T0087199.1 MGP_WSBEiJ_G0032656.1 mouse_genomes_project 8 32035908 32060938 - MGP_WSBEiJ_P0087199 Ubxn8 protein_coding protein_coding MGP_WSBEiJ_T0086932.1 MGP_WSBEiJ_G0032544.1 mouse_genomes_project 8 16614107 16614326 - MGP_WSBEiJ_P0086932 Defb35 protein_coding protein_coding MGP_WSBEiJ_T0089637.1 MGP_WSBEiJ_G0033421.1 mouse_genomes_project 8 129327656 129328188 + MGP_WSBEiJ_P0089637 protein_coding protein_coding MGP_WSBEiJ_T0088920.1 MGP_WSBEiJ_G0033198.1 mouse_genomes_project 8 107595834 107619107 - MGP_WSBEiJ_P0088920 Slc12a4 protein_coding protein_coding MGP_WSBEiJ_T0088921.1 MGP_WSBEiJ_G0033198.1 mouse_genomes_project 8 107595834 107619178 - MGP_WSBEiJ_P0088921 Slc12a4 protein_coding protein_coding MGP_WSBEiJ_T0088922.1 MGP_WSBEiJ_G0033198.1 mouse_genomes_project 8 107598774 107600258 - Slc12a4 protein_coding retained_intron MGP_WSBEiJ_T0088923.1 MGP_WSBEiJ_G0033198.1 mouse_genomes_project 8 107605966 107617483 - MGP_WSBEiJ_P0088923 Slc12a4 protein_coding protein_coding MGP_WSBEiJ_T0088924.1 MGP_WSBEiJ_G0033198.1 mouse_genomes_project 8 107613525 107619137 - Slc12a4 protein_coding retained_intron MGP_WSBEiJ_T0089013.1 MGP_WSBEiJ_G0033228.1 mouse_genomes_project 8 109178474 109187552 - Nob1 protein_coding retained_intron MGP_WSBEiJ_T0089014.1 MGP_WSBEiJ_G0033228.1 mouse_genomes_project 8 109178474 109190876 - MGP_WSBEiJ_P0089014 Nob1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089015.1 MGP_WSBEiJ_G0033228.1 mouse_genomes_project 8 109178477 109190884 - MGP_WSBEiJ_P0089015 Nob1 protein_coding protein_coding MGP_WSBEiJ_T0089016.1 MGP_WSBEiJ_G0033228.1 mouse_genomes_project 8 109182219 109190821 - Nob1 protein_coding retained_intron MGP_WSBEiJ_T0089017.1 MGP_WSBEiJ_G0033228.1 mouse_genomes_project 8 109183676 109190886 - Nob1 protein_coding retained_intron MGP_WSBEiJ_T0089018.1 MGP_WSBEiJ_G0033228.1 mouse_genomes_project 8 109184037 109188317 - Nob1 protein_coding processed_transcript MGP_WSBEiJ_T0089019.1 MGP_WSBEiJ_G0033228.1 mouse_genomes_project 8 109184135 109184648 - Nob1 protein_coding retained_intron MGP_WSBEiJ_T0089020.1 MGP_WSBEiJ_G0033228.1 mouse_genomes_project 8 109184331 109190861 - MGP_WSBEiJ_P0089020 Nob1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096862.1 MGP_WSBEiJ_G0035543.1 mouse_genomes_project 8 125225011 125226998 + pseudogene pseudogene MGP_WSBEiJ_T0086863.1 MGP_WSBEiJ_G0032522.1 mouse_genomes_project 8 11264045 11264843 + MGP_WSBEiJ_P0086863 protein_coding protein_coding MGP_WSBEiJ_T0089154.1 MGP_WSBEiJ_G0033271.1 mouse_genomes_project 8 113666027 113695712 + MGP_WSBEiJ_P0089154 Zfp1 protein_coding protein_coding MGP_WSBEiJ_T0087034.1 MGP_WSBEiJ_G0032597.1 mouse_genomes_project 8 21224690 21240811 - MGP_WSBEiJ_P0087034 Golga7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087112.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23833760 23839466 + MGP_WSBEiJ_P0087112 Plpp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087113.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23833760 23839466 + MGP_WSBEiJ_P0087113 Plpp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087114.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23833763 23839466 + Plpp5 protein_coding retained_intron MGP_WSBEiJ_T0087115.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23833763 23839466 + MGP_WSBEiJ_P0087115 Plpp5 protein_coding protein_coding MGP_WSBEiJ_T0087116.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23833763 23839466 + MGP_WSBEiJ_P0087116 Plpp5 protein_coding protein_coding MGP_WSBEiJ_T0087117.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23833799 23835821 + Plpp5 protein_coding retained_intron MGP_WSBEiJ_T0087118.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23834081 23839462 + Plpp5 protein_coding retained_intron MGP_WSBEiJ_T0087119.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23834155 23839466 + Plpp5 protein_coding processed_transcript MGP_WSBEiJ_T0087120.1 MGP_WSBEiJ_G0032616.1 mouse_genomes_project 8 23836638 23839027 + Plpp5 protein_coding retained_intron MGP_WSBEiJ_T0087603.1 MGP_WSBEiJ_G0032772.1 mouse_genomes_project 8 64320323 64427769 - MGP_WSBEiJ_P0087603 Cpe protein_coding protein_coding MGP_WSBEiJ_T0087700.1 MGP_WSBEiJ_G0032801.1 mouse_genomes_project 8 69517152 69535300 - MGP_WSBEiJ_P0087700 Zfp869 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088870.1 MGP_WSBEiJ_G0033173.1 mouse_genomes_project 8 107009135 107043244 + Lrrc36 protein_coding processed_transcript MGP_WSBEiJ_T0088871.1 MGP_WSBEiJ_G0033173.1 mouse_genomes_project 8 107009186 107023814 + Lrrc36 protein_coding processed_transcript MGP_WSBEiJ_T0088872.1 MGP_WSBEiJ_G0033173.1 mouse_genomes_project 8 107009186 107066042 + MGP_WSBEiJ_P0088872 Lrrc36 protein_coding protein_coding MGP_WSBEiJ_T0088873.1 MGP_WSBEiJ_G0033173.1 mouse_genomes_project 8 107024550 107066040 + MGP_WSBEiJ_P0088873 Lrrc36 protein_coding protein_coding MGP_WSBEiJ_T0086906.1 MGP_WSBEiJ_G0032534.1 mouse_genomes_project 8 13312265 14989468 - MGP_WSBEiJ_P0086906 Csmd1 protein_coding protein_coding MGP_WSBEiJ_T0086907.1 MGP_WSBEiJ_G0032534.1 mouse_genomes_project 8 13312273 13404546 - Csmd1 protein_coding retained_intron MGP_WSBEiJ_T0086908.1 MGP_WSBEiJ_G0032534.1 mouse_genomes_project 8 13504712 14989468 - Csmd1 protein_coding processed_transcript MGP_WSBEiJ_T0086909.1 MGP_WSBEiJ_G0032534.1 mouse_genomes_project 8 13717273 14989468 - Csmd1 protein_coding retained_intron MGP_WSBEiJ_T0086910.1 MGP_WSBEiJ_G0032534.1 mouse_genomes_project 8 13780930 14989773 - Csmd1 protein_coding processed_transcript MGP_WSBEiJ_T0086911.1 MGP_WSBEiJ_G0032534.1 mouse_genomes_project 8 14662827 14989572 - Csmd1 protein_coding retained_intron MGP_WSBEiJ_T0086912.1 MGP_WSBEiJ_G0032534.1 mouse_genomes_project 8 14822778 14989564 - Csmd1 protein_coding processed_transcript MGP_WSBEiJ_T0088169.1 MGP_WSBEiJ_G0032946.1 mouse_genomes_project 8 80674388 80694858 + MGP_WSBEiJ_P0088169 Gypa protein_coding protein_coding MGP_WSBEiJ_T0088794.1 MGP_WSBEiJ_G0033141.1 mouse_genomes_project 8 106063195 106072610 + MGP_WSBEiJ_P0088794 Car7 protein_coding protein_coding MGP_WSBEiJ_T0088795.1 MGP_WSBEiJ_G0033141.1 mouse_genomes_project 8 106070142 106071326 + Car7 protein_coding retained_intron MGP_WSBEiJ_T0086862.1 MGP_WSBEiJ_G0032521.1 mouse_genomes_project 8 11251788 11257274 - MGP_WSBEiJ_P0086862 Coprs protein_coding protein_coding MGP_WSBEiJ_T0087526.1 MGP_WSBEiJ_G0032754.1 mouse_genomes_project 8 56941411 56947079 + MGP_WSBEiJ_P0087526 Hmgb2 protein_coding protein_coding MGP_WSBEiJ_T0087833.1 MGP_WSBEiJ_G0032837.1 mouse_genomes_project 8 70376534 70378964 - 2810428I15Rik protein_coding retained_intron MGP_WSBEiJ_T0087834.1 MGP_WSBEiJ_G0032837.1 mouse_genomes_project 8 70376537 70378355 - 2810428I15Rik protein_coding retained_intron MGP_WSBEiJ_T0087835.1 MGP_WSBEiJ_G0032837.1 mouse_genomes_project 8 70376537 70378669 - 2810428I15Rik protein_coding processed_transcript MGP_WSBEiJ_T0087836.1 MGP_WSBEiJ_G0032837.1 mouse_genomes_project 8 70376537 70378995 - MGP_WSBEiJ_P0087836 2810428I15Rik protein_coding protein_coding MGP_WSBEiJ_T0087837.1 MGP_WSBEiJ_G0032837.1 mouse_genomes_project 8 70376541 70378980 - MGP_WSBEiJ_P0087837 2810428I15Rik protein_coding protein_coding MGP_WSBEiJ_T0087838.1 MGP_WSBEiJ_G0032837.1 mouse_genomes_project 8 70376640 70378351 - 2810428I15Rik protein_coding retained_intron MGP_WSBEiJ_T0087839.1 MGP_WSBEiJ_G0032837.1 mouse_genomes_project 8 70377487 70378942 - 2810428I15Rik protein_coding retained_intron MGP_WSBEiJ_T0087840.1 MGP_WSBEiJ_G0032837.1 mouse_genomes_project 8 70378093 70378956 - 2810428I15Rik protein_coding retained_intron MGP_WSBEiJ_T0089231.1 MGP_WSBEiJ_G0033306.1 mouse_genomes_project 8 120773898 121873701 + MGP_WSBEiJ_P0089231 Cdh13 protein_coding protein_coding MGP_WSBEiJ_T0089232.1 MGP_WSBEiJ_G0033306.1 mouse_genomes_project 8 120773920 121370412 + Cdh13 protein_coding retained_intron MGP_WSBEiJ_T0089233.1 MGP_WSBEiJ_G0033306.1 mouse_genomes_project 8 120773940 121493214 + Cdh13 protein_coding retained_intron MGP_WSBEiJ_T0089234.1 MGP_WSBEiJ_G0033306.1 mouse_genomes_project 8 120773961 121266338 + Cdh13 protein_coding retained_intron MGP_WSBEiJ_T0089235.1 MGP_WSBEiJ_G0033306.1 mouse_genomes_project 8 120773962 121744181 + Cdh13 protein_coding retained_intron MGP_WSBEiJ_T0089236.1 MGP_WSBEiJ_G0033306.1 mouse_genomes_project 8 120805854 121376764 + Cdh13 protein_coding processed_transcript MGP_WSBEiJ_T0089237.1 MGP_WSBEiJ_G0033306.1 mouse_genomes_project 8 121822742 121861559 + Cdh13 protein_coding processed_transcript MGP_WSBEiJ_T0101121.1 MGP_WSBEiJ_G0039578.1 mouse_genomes_project 8 16700850 16703387 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0088142.1 MGP_WSBEiJ_G0032936.1 mouse_genomes_project 8 78599659 78835269 + MGP_WSBEiJ_P0088142 Slc10a7 protein_coding protein_coding MGP_WSBEiJ_T0101122.1 MGP_WSBEiJ_G0039579.1 mouse_genomes_project 8 16790432 16792887 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0086807.1 MGP_WSBEiJ_G0032503.1 mouse_genomes_project 8 10386541 10416598 - MGP_WSBEiJ_P0086807 Pcid2 protein_coding protein_coding MGP_WSBEiJ_T0086808.1 MGP_WSBEiJ_G0032503.1 mouse_genomes_project 8 10386541 10416598 - MGP_WSBEiJ_P0086808 Pcid2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086809.1 MGP_WSBEiJ_G0032503.1 mouse_genomes_project 8 10389028 10396503 - Pcid2 protein_coding processed_transcript MGP_WSBEiJ_T0086810.1 MGP_WSBEiJ_G0032503.1 mouse_genomes_project 8 10389200 10415962 - Pcid2 protein_coding processed_transcript MGP_WSBEiJ_T0086811.1 MGP_WSBEiJ_G0032503.1 mouse_genomes_project 8 10395104 10408458 - MGP_WSBEiJ_P0086811 Pcid2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086812.1 MGP_WSBEiJ_G0032503.1 mouse_genomes_project 8 10395153 10415952 - MGP_WSBEiJ_P0086812 Pcid2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086871.1 MGP_WSBEiJ_G0032525.1 mouse_genomes_project 8 11396639 11459575 - MGP_WSBEiJ_P0086871 Erich1 protein_coding protein_coding MGP_WSBEiJ_T0087333.1 MGP_WSBEiJ_G0032696.1 mouse_genomes_project 8 42079302 42090001 + MGP_WSBEiJ_P0087333 Triml2 protein_coding protein_coding MGP_WSBEiJ_T0086841.1 MGP_WSBEiJ_G0032514.1 mouse_genomes_project 8 10805270 10837475 - MGP_WSBEiJ_P0086841 Gas6 protein_coding protein_coding MGP_WSBEiJ_T0088918.1 MGP_WSBEiJ_G0033196.1 mouse_genomes_project 8 107587957 107590622 - MGP_WSBEiJ_P0088918 Psmb10 protein_coding protein_coding MGP_WSBEiJ_T0087035.1 MGP_WSBEiJ_G0032598.1 mouse_genomes_project 8 21409396 21450821 + MGP_WSBEiJ_P0087035 Sfrp1 protein_coding protein_coding MGP_WSBEiJ_T0011521.1 MGP_WSBEiJ_G0009678.1 mouse_genomes_project 8 80137067 80137242 + Gm27820 misc_RNA misc_RNA MGP_WSBEiJ_T0099791.1 MGP_WSBEiJ_G0038454.1 mouse_genomes_project 8 67069489 67069639 - Gm24677 snoRNA snoRNA MGP_WSBEiJ_T0008975.1 MGP_WSBEiJ_G0007227.1 mouse_genomes_project 8 84557157 84557844 + Gm26532 lincRNA lincRNA MGP_WSBEiJ_T0087467.1 MGP_WSBEiJ_G0032734.1 mouse_genomes_project 8 46944878 47115795 - MGP_WSBEiJ_P0087467 Wwc2 protein_coding protein_coding MGP_WSBEiJ_T0088881.1 MGP_WSBEiJ_G0033178.1 mouse_genomes_project 8 107174061 107253216 - MGP_WSBEiJ_P0088881 Agrp protein_coding protein_coding MGP_WSBEiJ_T0088882.1 MGP_WSBEiJ_G0033178.1 mouse_genomes_project 8 107174061 107175661 - MGP_WSBEiJ_P0088882 Agrp protein_coding protein_coding MGP_WSBEiJ_T0088883.1 MGP_WSBEiJ_G0033178.1 mouse_genomes_project 8 107174161 107190211 - MGP_WSBEiJ_P0088883 Agrp protein_coding protein_coding MGP_WSBEiJ_T0099764.1 MGP_WSBEiJ_G0038427.1 mouse_genomes_project 8 12652512 12652645 - Gm24231 snoRNA snoRNA MGP_WSBEiJ_T0086847.1 MGP_WSBEiJ_G0032516.1 mouse_genomes_project 8 10912780 10929856 - Rasa3 protein_coding retained_intron MGP_WSBEiJ_T0086848.1 MGP_WSBEiJ_G0032516.1 mouse_genomes_project 8 10912780 11026172 - MGP_WSBEiJ_P0086848 Rasa3 protein_coding protein_coding MGP_WSBEiJ_T0086849.1 MGP_WSBEiJ_G0032516.1 mouse_genomes_project 8 10923287 10923861 - Rasa3 protein_coding retained_intron MGP_WSBEiJ_T0086850.1 MGP_WSBEiJ_G0032516.1 mouse_genomes_project 8 10941626 10951927 - Rasa3 protein_coding retained_intron MGP_WSBEiJ_T0086851.1 MGP_WSBEiJ_G0032516.1 mouse_genomes_project 8 10941627 11026020 - MGP_WSBEiJ_P0086851 Rasa3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086852.1 MGP_WSBEiJ_G0032516.1 mouse_genomes_project 8 10943912 11026052 - Rasa3 protein_coding retained_intron MGP_WSBEiJ_T0015457.1 MGP_WSBEiJ_G0013587.1 mouse_genomes_project 8 36538402 36539417 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015441.1 MGP_WSBEiJ_G0013571.1 mouse_genomes_project 8 10396328 10397253 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088849.1 MGP_WSBEiJ_G0033166.1 mouse_genomes_project 8 106895605 106900635 + MGP_WSBEiJ_P0088849 Elmo3 protein_coding protein_coding MGP_WSBEiJ_T0089176.1 MGP_WSBEiJ_G0033283.1 mouse_genomes_project 8 115806789 115816386 + MGP_WSBEiJ_P0089176 Mon1b protein_coding protein_coding MGP_WSBEiJ_T0089177.1 MGP_WSBEiJ_G0033283.1 mouse_genomes_project 8 115807002 115816386 + MGP_WSBEiJ_P0089177 Mon1b protein_coding protein_coding MGP_WSBEiJ_T0010803.1 MGP_WSBEiJ_G0008960.1 mouse_genomes_project 8 84556909 84556996 + Mir27a miRNA miRNA MGP_WSBEiJ_T0087772.1 MGP_WSBEiJ_G0032824.1 mouse_genomes_project 8 70041604 70073635 - Slc25a42 protein_coding retained_intron MGP_WSBEiJ_T0087773.1 MGP_WSBEiJ_G0032824.1 mouse_genomes_project 8 70041604 70073635 - MGP_WSBEiJ_P0087773 Slc25a42 protein_coding protein_coding MGP_WSBEiJ_T0087774.1 MGP_WSBEiJ_G0032824.1 mouse_genomes_project 8 70041604 70073586 - MGP_WSBEiJ_P0087774 Slc25a42 protein_coding protein_coding MGP_WSBEiJ_T0087775.1 MGP_WSBEiJ_G0032824.1 mouse_genomes_project 8 70046657 70073635 - Slc25a42 protein_coding retained_intron MGP_WSBEiJ_T0087776.1 MGP_WSBEiJ_G0032824.1 mouse_genomes_project 8 70051334 70073635 - Slc25a42 protein_coding retained_intron MGP_WSBEiJ_T0010775.1 MGP_WSBEiJ_G0008932.1 mouse_genomes_project 8 23227482 23227591 - Mir8108 miRNA miRNA MGP_WSBEiJ_T0087191.1 MGP_WSBEiJ_G0032652.1 mouse_genomes_project 8 31799762 31832077 + MGP_WSBEiJ_P0087191 Purg protein_coding protein_coding MGP_WSBEiJ_T0087192.1 MGP_WSBEiJ_G0032652.1 mouse_genomes_project 8 31799762 31800969 + MGP_WSBEiJ_P0087192 Purg protein_coding protein_coding MGP_WSBEiJ_T0097114.1 MGP_WSBEiJ_G0035795.1 mouse_genomes_project 8 63868995 63869117 + Gm22586 rRNA rRNA MGP_WSBEiJ_T0087245.1 MGP_WSBEiJ_G0032672.1 mouse_genomes_project 8 34434018 34435871 - MGP_WSBEiJ_P0087245 Cldn23 protein_coding protein_coding MGP_WSBEiJ_T0086888.1 MGP_WSBEiJ_G0032530.1 mouse_genomes_project 8 12308546 12409342 + MGP_WSBEiJ_P0086888 Arhgef10 protein_coding protein_coding MGP_WSBEiJ_T0086889.1 MGP_WSBEiJ_G0032530.1 mouse_genomes_project 8 12308601 12330833 + Arhgef10 protein_coding retained_intron MGP_WSBEiJ_T0086890.1 MGP_WSBEiJ_G0032530.1 mouse_genomes_project 8 12308608 12366902 + MGP_WSBEiJ_P0086890 Arhgef10 protein_coding protein_coding MGP_WSBEiJ_T0086891.1 MGP_WSBEiJ_G0032530.1 mouse_genomes_project 8 12308622 12409342 + MGP_WSBEiJ_P0086891 Arhgef10 protein_coding protein_coding MGP_WSBEiJ_T0086892.1 MGP_WSBEiJ_G0032530.1 mouse_genomes_project 8 12350744 12409339 + MGP_WSBEiJ_P0086892 Arhgef10 protein_coding protein_coding MGP_WSBEiJ_T0086893.1 MGP_WSBEiJ_G0032530.1 mouse_genomes_project 8 12397170 12397936 + Arhgef10 protein_coding processed_transcript MGP_WSBEiJ_T0086894.1 MGP_WSBEiJ_G0032530.1 mouse_genomes_project 8 12403940 12409331 + Arhgef10 protein_coding processed_transcript MGP_WSBEiJ_T0086963.1 MGP_WSBEiJ_G0032573.1 mouse_genomes_project 8 19883136 19887399 + MGP_WSBEiJ_P0086963 Ccdc70 protein_coding protein_coding MGP_WSBEiJ_T0086964.1 MGP_WSBEiJ_G0032573.1 mouse_genomes_project 8 19883965 19887423 + MGP_WSBEiJ_P0086964 Ccdc70 protein_coding protein_coding MGP_WSBEiJ_T0088415.1 MGP_WSBEiJ_G0033014.1 mouse_genomes_project 8 85405954 85418178 + MGP_WSBEiJ_P0088415 Hook2 protein_coding protein_coding MGP_WSBEiJ_T0089363.1 MGP_WSBEiJ_G0033341.1 mouse_genomes_project 8 124344215 124354682 + MGP_WSBEiJ_P0089363 Map1lc3b protein_coding protein_coding MGP_WSBEiJ_T0089364.1 MGP_WSBEiJ_G0033341.1 mouse_genomes_project 8 124344331 124346964 + Map1lc3b protein_coding retained_intron MGP_WSBEiJ_T0089365.1 MGP_WSBEiJ_G0033341.1 mouse_genomes_project 8 124344335 124353968 + Map1lc3b protein_coding retained_intron MGP_WSBEiJ_T0086987.1 MGP_WSBEiJ_G0032582.1 mouse_genomes_project 8 20318428 20341493 - MGP_WSBEiJ_P0086987 Slc25a15 protein_coding protein_coding MGP_WSBEiJ_T0088776.1 MGP_WSBEiJ_G0033136.1 mouse_genomes_project 8 105841041 105855214 + MGP_WSBEiJ_P0088776 Cmtm3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0005272.1 MGP_WSBEiJ_G0004465.1 mouse_genomes_project 8 39888369 39900553 + Gm16193 antisense antisense MGP_WSBEiJ_T0087246.1 MGP_WSBEiJ_G0032673.1 mouse_genomes_project 8 34730692 34786340 + MGP_WSBEiJ_P0087246 D8Ertd82e protein_coding protein_coding MGP_WSBEiJ_T0087247.1 MGP_WSBEiJ_G0032673.1 mouse_genomes_project 8 34730725 34742474 + D8Ertd82e protein_coding retained_intron MGP_WSBEiJ_T0087248.1 MGP_WSBEiJ_G0032673.1 mouse_genomes_project 8 34730725 34738611 + D8Ertd82e protein_coding retained_intron MGP_WSBEiJ_T0010774.1 MGP_WSBEiJ_G0008931.1 mouse_genomes_project 8 21123695 21123785 - Mir3107 miRNA miRNA MGP_WSBEiJ_T0086929.1 MGP_WSBEiJ_G0032541.1 mouse_genomes_project 8 16516721 16519870 - MGP_WSBEiJ_P0086929 Defb38 protein_coding protein_coding MGP_WSBEiJ_T0089374.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124570104 124602548 - MGP_WSBEiJ_P0089374 Klhdc4 protein_coding protein_coding MGP_WSBEiJ_T0089375.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124570124 124602519 - Klhdc4 protein_coding retained_intron MGP_WSBEiJ_T0089376.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124570135 124571219 - Klhdc4 protein_coding retained_intron MGP_WSBEiJ_T0089377.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124570338 124602459 - MGP_WSBEiJ_P0089377 Klhdc4 protein_coding protein_coding MGP_WSBEiJ_T0089378.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124570338 124602459 - MGP_WSBEiJ_P0089378 Klhdc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089379.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124570338 124602459 - MGP_WSBEiJ_P0089379 Klhdc4 protein_coding protein_coding MGP_WSBEiJ_T0089380.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124571963 124580325 - Klhdc4 protein_coding processed_transcript MGP_WSBEiJ_T0089381.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124573266 124575392 - Klhdc4 protein_coding retained_intron MGP_WSBEiJ_T0089382.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124595547 124602488 - Klhdc4 protein_coding retained_intron MGP_WSBEiJ_T0089383.1 MGP_WSBEiJ_G0033344.1 mouse_genomes_project 8 124595841 124602483 - MGP_WSBEiJ_P0089383 Klhdc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088484.1 MGP_WSBEiJ_G0033036.1 mouse_genomes_project 8 86924517 87022395 - MGP_WSBEiJ_P0088484 Abcc12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088485.1 MGP_WSBEiJ_G0033036.1 mouse_genomes_project 8 86946824 87022426 - MGP_WSBEiJ_P0088485 Abcc12 protein_coding protein_coding MGP_WSBEiJ_T0088486.1 MGP_WSBEiJ_G0033036.1 mouse_genomes_project 8 86946828 86977009 - MGP_WSBEiJ_P0088486 Abcc12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088487.1 MGP_WSBEiJ_G0033036.1 mouse_genomes_project 8 86947086 87009696 - MGP_WSBEiJ_P0088487 Abcc12 protein_coding protein_coding MGP_WSBEiJ_T0088488.1 MGP_WSBEiJ_G0033036.1 mouse_genomes_project 8 86947086 87009696 - MGP_WSBEiJ_P0088488 Abcc12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088489.1 MGP_WSBEiJ_G0033036.1 mouse_genomes_project 8 86947086 87009696 - MGP_WSBEiJ_P0088489 Abcc12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088490.1 MGP_WSBEiJ_G0033036.1 mouse_genomes_project 8 86976222 87022426 - MGP_WSBEiJ_P0088490 Abcc12 protein_coding protein_coding MGP_WSBEiJ_T0099761.1 MGP_WSBEiJ_G0038424.1 mouse_genomes_project 8 4716507 4716636 + Gm25169 snoRNA snoRNA MGP_WSBEiJ_T0005270.1 MGP_WSBEiJ_G0004463.1 mouse_genomes_project 8 32239904 32266523 + Gm26632 antisense antisense MGP_WSBEiJ_T0088257.1 MGP_WSBEiJ_G0032975.1 mouse_genomes_project 8 84340374 84343690 + MGP_WSBEiJ_P0088257 1700067K01Rik protein_coding protein_coding MGP_WSBEiJ_T0088258.1 MGP_WSBEiJ_G0032975.1 mouse_genomes_project 8 84340576 84343589 + MGP_WSBEiJ_P0088258 1700067K01Rik protein_coding protein_coding MGP_WSBEiJ_T0088259.1 MGP_WSBEiJ_G0032975.1 mouse_genomes_project 8 84340576 84343583 + MGP_WSBEiJ_P0088259 1700067K01Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088260.1 MGP_WSBEiJ_G0032975.1 mouse_genomes_project 8 84341217 84342177 + 1700067K01Rik protein_coding retained_intron MGP_WSBEiJ_T0011512.1 MGP_WSBEiJ_G0009669.1 mouse_genomes_project 8 8934689 8934955 - Gm27854 misc_RNA misc_RNA MGP_WSBEiJ_T0087510.1 MGP_WSBEiJ_G0032747.1 mouse_genomes_project 8 55313995 55421187 + Glra3 protein_coding processed_transcript MGP_WSBEiJ_T0087511.1 MGP_WSBEiJ_G0032747.1 mouse_genomes_project 8 55314044 55506404 + MGP_WSBEiJ_P0087511 Glra3 protein_coding protein_coding MGP_WSBEiJ_T0088607.1 MGP_WSBEiJ_G0033075.1 mouse_genomes_project 8 94054758 94097408 - MGP_WSBEiJ_P0088607 Ces1g protein_coding protein_coding MGP_WSBEiJ_T0087794.1 MGP_WSBEiJ_G0032827.1 mouse_genomes_project 8 70146199 70151034 + MGP_WSBEiJ_P0087794 Homer3 protein_coding protein_coding MGP_WSBEiJ_T0087795.1 MGP_WSBEiJ_G0032827.1 mouse_genomes_project 8 70146199 70158812 + MGP_WSBEiJ_P0087795 Homer3 protein_coding protein_coding MGP_WSBEiJ_T0087796.1 MGP_WSBEiJ_G0032827.1 mouse_genomes_project 8 70146371 70158812 + MGP_WSBEiJ_P0087796 Homer3 protein_coding protein_coding MGP_WSBEiJ_T0087797.1 MGP_WSBEiJ_G0032827.1 mouse_genomes_project 8 70146406 70150806 + Homer3 protein_coding retained_intron MGP_WSBEiJ_T0087798.1 MGP_WSBEiJ_G0032827.1 mouse_genomes_project 8 70149748 70158804 + MGP_WSBEiJ_P0087798 Homer3 protein_coding protein_coding MGP_WSBEiJ_T0087799.1 MGP_WSBEiJ_G0032827.1 mouse_genomes_project 8 70150434 70156193 + Homer3 protein_coding retained_intron MGP_WSBEiJ_T0087800.1 MGP_WSBEiJ_G0032827.1 mouse_genomes_project 8 70153618 70156058 + Homer3 protein_coding retained_intron MGP_WSBEiJ_T0087801.1 MGP_WSBEiJ_G0032827.1 mouse_genomes_project 8 70155529 70157921 + MGP_WSBEiJ_P0087801 Homer3 protein_coding protein_coding MGP_WSBEiJ_T0015446.1 MGP_WSBEiJ_G0013576.1 mouse_genomes_project 8 17132906 17135586 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0086980.1 MGP_WSBEiJ_G0032579.1 mouse_genomes_project 8 20128222 20158781 + MGP_WSBEiJ_P0086980 Vps36 protein_coding protein_coding MGP_WSBEiJ_T0086981.1 MGP_WSBEiJ_G0032579.1 mouse_genomes_project 8 20128255 20143463 + Vps36 protein_coding processed_transcript MGP_WSBEiJ_T0086982.1 MGP_WSBEiJ_G0032579.1 mouse_genomes_project 8 20153703 20155336 + Vps36 protein_coding retained_intron MGP_WSBEiJ_T0002298.1 MGP_WSBEiJ_G0002215.1 mouse_genomes_project 8 123344725 123345592 + TEC TEC MGP_WSBEiJ_T0009033.1 MGP_WSBEiJ_G0007265.1 mouse_genomes_project 8 122815118 122844255 - A330074K22Rik lincRNA lincRNA MGP_WSBEiJ_T0087955.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384834 71387892 + Dda1 protein_coding processed_transcript MGP_WSBEiJ_T0087956.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384834 71391742 + Dda1 protein_coding processed_transcript MGP_WSBEiJ_T0087957.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384834 71388021 + Dda1 protein_coding retained_intron MGP_WSBEiJ_T0087958.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384834 71391742 + Dda1 protein_coding processed_transcript MGP_WSBEiJ_T0087959.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384834 71391742 + MGP_WSBEiJ_P0087959 Dda1 protein_coding protein_coding MGP_WSBEiJ_T0087960.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384834 71391742 + MGP_WSBEiJ_P0087960 Dda1 protein_coding protein_coding MGP_WSBEiJ_T0087961.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384840 71391742 + MGP_WSBEiJ_P0087961 Dda1 protein_coding protein_coding MGP_WSBEiJ_T0087962.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384846 71388428 + Dda1 protein_coding retained_intron MGP_WSBEiJ_T0087963.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384846 71390621 + Dda1 protein_coding retained_intron MGP_WSBEiJ_T0087964.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71384920 71388261 + Dda1 protein_coding retained_intron MGP_WSBEiJ_T0087965.1 MGP_WSBEiJ_G0032876.1 mouse_genomes_project 8 71386047 71391742 + Dda1 protein_coding processed_transcript MGP_WSBEiJ_T0097110.1 MGP_WSBEiJ_G0035791.1 mouse_genomes_project 8 43565387 43565494 + Gm26089 rRNA rRNA MGP_WSBEiJ_T0086962.1 MGP_WSBEiJ_G0032572.1 mouse_genomes_project 8 19872081 19877671 + MGP_WSBEiJ_P0086962 Fam90a1a protein_coding protein_coding MGP_WSBEiJ_T0086901.1 MGP_WSBEiJ_G0032533.1 mouse_genomes_project 8 12473401 12480129 + Myom2 protein_coding processed_transcript MGP_WSBEiJ_T0086902.1 MGP_WSBEiJ_G0032533.1 mouse_genomes_project 8 12474614 12490076 + Myom2 protein_coding retained_intron MGP_WSBEiJ_T0086903.1 MGP_WSBEiJ_G0032533.1 mouse_genomes_project 8 12475197 12543920 + MGP_WSBEiJ_P0086903 Myom2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086904.1 MGP_WSBEiJ_G0032533.1 mouse_genomes_project 8 12516109 12518926 + Myom2 protein_coding retained_intron MGP_WSBEiJ_T0086905.1 MGP_WSBEiJ_G0032533.1 mouse_genomes_project 8 12529935 12542124 + Myom2 protein_coding processed_transcript MGP_WSBEiJ_T0010777.1 MGP_WSBEiJ_G0008934.1 mouse_genomes_project 8 32636543 32636634 - Mir6395 miRNA miRNA MGP_WSBEiJ_T0086820.1 MGP_WSBEiJ_G0032505.1 mouse_genomes_project 8 10473122 10489305 + MGP_WSBEiJ_P0086820 Lamp1 protein_coding protein_coding MGP_WSBEiJ_T0015454.1 MGP_WSBEiJ_G0013584.1 mouse_genomes_project 8 32781061 32781455 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088235.1 MGP_WSBEiJ_G0032969.1 mouse_genomes_project 8 84038073 84057481 - MGP_WSBEiJ_P0088235 Adgre5 protein_coding protein_coding MGP_WSBEiJ_T0088236.1 MGP_WSBEiJ_G0032969.1 mouse_genomes_project 8 84038184 84057324 - MGP_WSBEiJ_P0088236 Adgre5 protein_coding protein_coding MGP_WSBEiJ_T0088237.1 MGP_WSBEiJ_G0032969.1 mouse_genomes_project 8 84038186 84057328 - MGP_WSBEiJ_P0088237 Adgre5 protein_coding protein_coding MGP_WSBEiJ_T0088238.1 MGP_WSBEiJ_G0032969.1 mouse_genomes_project 8 84038640 84039653 - Adgre5 protein_coding retained_intron MGP_WSBEiJ_T0088239.1 MGP_WSBEiJ_G0032969.1 mouse_genomes_project 8 84040070 84044441 - Adgre5 protein_coding retained_intron MGP_WSBEiJ_T0088240.1 MGP_WSBEiJ_G0032969.1 mouse_genomes_project 8 84043684 84044467 - Adgre5 protein_coding retained_intron MGP_WSBEiJ_T0088241.1 MGP_WSBEiJ_G0032969.1 mouse_genomes_project 8 84049677 84057338 - MGP_WSBEiJ_P0088241 Adgre5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087869.1 MGP_WSBEiJ_G0032842.1 mouse_genomes_project 8 70472655 70475446 + MGP_WSBEiJ_P0087869 Isyna1 protein_coding protein_coding MGP_WSBEiJ_T0088981.1 MGP_WSBEiJ_G0033220.1 mouse_genomes_project 8 108781312 108783801 - MGP_WSBEiJ_P0088981 Pdf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088984.1 MGP_WSBEiJ_G0033220.1 mouse_genomes_project 8 108783134 108785228 - MGP_WSBEiJ_P0088984 Pdf protein_coding protein_coding MGP_WSBEiJ_T0086943.1 MGP_WSBEiJ_G0032554.1 mouse_genomes_project 8 17003334 17006022 + MGP_WSBEiJ_P0086943 Defb7 protein_coding protein_coding MGP_WSBEiJ_T0086643.1 MGP_WSBEiJ_G0032457.1 mouse_genomes_project 8 1063342 1064988 + MGP_WSBEiJ_P0086643 protein_coding protein_coding MGP_WSBEiJ_T0086632.1 MGP_WSBEiJ_G0032452.1 mouse_genomes_project 8 777435 783779 - MGP_WSBEiJ_P0086632 Cd209e protein_coding protein_coding MGP_WSBEiJ_T0089460.1 MGP_WSBEiJ_G0033366.1 mouse_genomes_project 8 125653323 125673508 + MGP_WSBEiJ_P0089460 Cdh15 protein_coding protein_coding MGP_WSBEiJ_T0002294.1 MGP_WSBEiJ_G0002211.1 mouse_genomes_project 8 110540949 110546157 + TEC TEC MGP_WSBEiJ_T0089225.1 MGP_WSBEiJ_G0033302.1 mouse_genomes_project 8 119929038 120080355 + MGP_WSBEiJ_P0089225 Plcg2 protein_coding protein_coding MGP_WSBEiJ_T0087946.1 MGP_WSBEiJ_G0032871.1 mouse_genomes_project 8 71293796 71307005 - MGP_WSBEiJ_P0087946 Ushbp1 protein_coding protein_coding MGP_WSBEiJ_T0086853.1 MGP_WSBEiJ_G0032517.1 mouse_genomes_project 8 11054718 11081179 + MGP_WSBEiJ_P0086853 protein_coding protein_coding MGP_WSBEiJ_T0088399.1 MGP_WSBEiJ_G0033011.1 mouse_genomes_project 8 85370134 85381435 - MGP_WSBEiJ_P0088399 Rnaseh2a protein_coding protein_coding MGP_WSBEiJ_T0088400.1 MGP_WSBEiJ_G0033011.1 mouse_genomes_project 8 85370145 85370583 - Rnaseh2a protein_coding retained_intron MGP_WSBEiJ_T0088401.1 MGP_WSBEiJ_G0033011.1 mouse_genomes_project 8 85370190 85384872 - MGP_WSBEiJ_P0088401 Rnaseh2a protein_coding protein_coding MGP_WSBEiJ_T0088402.1 MGP_WSBEiJ_G0033011.1 mouse_genomes_project 8 85370440 85381332 - Rnaseh2a protein_coding retained_intron MGP_WSBEiJ_T0088403.1 MGP_WSBEiJ_G0033011.1 mouse_genomes_project 8 85380977 85385114 - MGP_WSBEiJ_P0088403 Rnaseh2a protein_coding protein_coding MGP_WSBEiJ_T0088404.1 MGP_WSBEiJ_G0033011.1 mouse_genomes_project 8 85381322 85382248 - MGP_WSBEiJ_P0088404 Rnaseh2a protein_coding protein_coding MGP_WSBEiJ_T0088405.1 MGP_WSBEiJ_G0033011.1 mouse_genomes_project 8 85381599 85384929 - Rnaseh2a protein_coding processed_transcript MGP_WSBEiJ_T0088749.1 MGP_WSBEiJ_G0033123.1 mouse_genomes_project 8 96775643 96795014 - MGP_WSBEiJ_P0088749 Slc38a7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088750.1 MGP_WSBEiJ_G0033123.1 mouse_genomes_project 8 96779759 96781538 - Slc38a7 protein_coding retained_intron MGP_WSBEiJ_T0088751.1 MGP_WSBEiJ_G0033123.1 mouse_genomes_project 8 96781736 96783712 - Slc38a7 protein_coding retained_intron MGP_WSBEiJ_T0010839.1 MGP_WSBEiJ_G0008996.1 mouse_genomes_project 8 124749716 124749779 + Mir7237 miRNA miRNA MGP_WSBEiJ_T0089238.1 MGP_WSBEiJ_G0033307.1 mouse_genomes_project 8 121890106 121894491 + MGP_WSBEiJ_P0089238 Hsbp1 protein_coding protein_coding MGP_WSBEiJ_T0099793.1 MGP_WSBEiJ_G0038456.1 mouse_genomes_project 8 69970989 69971115 - Gm25906 snoRNA snoRNA MGP_WSBEiJ_T0099782.1 MGP_WSBEiJ_G0038445.1 mouse_genomes_project 8 52332350 52332466 + Gm23666 snoRNA snoRNA MGP_WSBEiJ_T0087705.1 MGP_WSBEiJ_G0032804.1 mouse_genomes_project 8 69589676 69604183 - MGP_WSBEiJ_P0087705 Zfp866 protein_coding protein_coding MGP_WSBEiJ_T0088013.1 MGP_WSBEiJ_G0032892.1 mouse_genomes_project 8 71621999 71633581 - MGP_WSBEiJ_P0088013 B3gnt3 protein_coding protein_coding MGP_WSBEiJ_T0088167.1 MGP_WSBEiJ_G0032945.1 mouse_genomes_project 8 80132784 80157870 - Hhip protein_coding processed_transcript MGP_WSBEiJ_T0088168.1 MGP_WSBEiJ_G0032945.1 mouse_genomes_project 8 80137022 80229000 - MGP_WSBEiJ_P0088168 Hhip protein_coding protein_coding MGP_WSBEiJ_T0088538.1 MGP_WSBEiJ_G0033050.1 mouse_genomes_project 8 89215024 89255888 + MGP_WSBEiJ_P0088538 Nod2 protein_coding protein_coding MGP_WSBEiJ_T0088539.1 MGP_WSBEiJ_G0033050.1 mouse_genomes_project 8 89215024 89255888 + MGP_WSBEiJ_P0088539 Nod2 protein_coding protein_coding MGP_WSBEiJ_T0088540.1 MGP_WSBEiJ_G0033050.1 mouse_genomes_project 8 89215093 89233632 + Nod2 protein_coding retained_intron MGP_WSBEiJ_T0088541.1 MGP_WSBEiJ_G0033050.1 mouse_genomes_project 8 89219109 89255887 + MGP_WSBEiJ_P0088541 Nod2 protein_coding protein_coding MGP_WSBEiJ_T0087638.1 MGP_WSBEiJ_G0032784.1 mouse_genomes_project 8 66468642 66478656 + MGP_WSBEiJ_P0087638 Npy1r protein_coding protein_coding MGP_WSBEiJ_T0086951.1 MGP_WSBEiJ_G0032561.1 mouse_genomes_project 8 19275052 19276164 - MGP_WSBEiJ_P0086951 protein_coding protein_coding MGP_WSBEiJ_T0088577.1 MGP_WSBEiJ_G0033062.1 mouse_genomes_project 8 92474655 92478039 - MGP_WSBEiJ_P0088577 Irx3 protein_coding protein_coding MGP_WSBEiJ_T0088578.1 MGP_WSBEiJ_G0033062.1 mouse_genomes_project 8 92474655 92478038 - MGP_WSBEiJ_P0088578 Irx3 protein_coding protein_coding MGP_WSBEiJ_T0086837.1 MGP_WSBEiJ_G0032511.1 mouse_genomes_project 8 10721381 10730090 - MGP_WSBEiJ_P0086837 Atp4b protein_coding protein_coding MGP_WSBEiJ_T0008917.1 MGP_WSBEiJ_G0007180.1 mouse_genomes_project 8 8199197 8247055 + 9530052E02Rik lincRNA lincRNA MGP_WSBEiJ_T0008918.1 MGP_WSBEiJ_G0007180.1 mouse_genomes_project 8 8242100 8247060 + 9530052E02Rik lincRNA lincRNA MGP_WSBEiJ_T0087841.1 MGP_WSBEiJ_G0032838.1 mouse_genomes_project 8 70383249 70386262 - MGP_WSBEiJ_P0087841 protein_coding protein_coding MGP_WSBEiJ_T0087842.1 MGP_WSBEiJ_G0032838.1 mouse_genomes_project 8 70383249 70386488 - MGP_WSBEiJ_P0087842 protein_coding protein_coding MGP_WSBEiJ_T0087843.1 MGP_WSBEiJ_G0032838.1 mouse_genomes_project 8 70383249 70386257 - MGP_WSBEiJ_P0087843 protein_coding protein_coding MGP_WSBEiJ_T0087844.1 MGP_WSBEiJ_G0032838.1 mouse_genomes_project 8 70383250 70386286 - protein_coding retained_intron MGP_WSBEiJ_T0087845.1 MGP_WSBEiJ_G0032838.1 mouse_genomes_project 8 70383252 70386324 - MGP_WSBEiJ_P0087845 protein_coding protein_coding MGP_WSBEiJ_T0087847.1 MGP_WSBEiJ_G0032838.1 mouse_genomes_project 8 70383314 70386708 - MGP_WSBEiJ_P0087847 protein_coding protein_coding MGP_WSBEiJ_T0087848.1 MGP_WSBEiJ_G0032838.1 mouse_genomes_project 8 70383907 70385423 - MGP_WSBEiJ_P0087848 protein_coding protein_coding MGP_WSBEiJ_T0088502.1 MGP_WSBEiJ_G0033041.1 mouse_genomes_project 8 88052368 88079459 + MGP_WSBEiJ_P0088502 4933402J07Rik protein_coding protein_coding MGP_WSBEiJ_T0009013.1 MGP_WSBEiJ_G0007250.1 mouse_genomes_project 8 93071982 93072421 - lincRNA lincRNA MGP_WSBEiJ_T0088626.1 MGP_WSBEiJ_G0033080.1 mouse_genomes_project 8 94878052 94897300 - MGP_WSBEiJ_P0088626 Nudt21 protein_coding protein_coding MGP_WSBEiJ_T0088216.1 MGP_WSBEiJ_G0032964.1 mouse_genomes_project 8 83913823 83918591 + MGP_WSBEiJ_P0088216 Dnajb1 protein_coding protein_coding MGP_WSBEiJ_T0010825.1 MGP_WSBEiJ_G0008982.1 mouse_genomes_project 8 110751573 110751652 + Mir3108 miRNA miRNA MGP_WSBEiJ_T0005296.1 MGP_WSBEiJ_G0004486.1 mouse_genomes_project 8 92298273 92306516 - Gm3235 antisense antisense MGP_WSBEiJ_T0015464.1 MGP_WSBEiJ_G0013594.1 mouse_genomes_project 8 60936294 60936731 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010814.1 MGP_WSBEiJ_G0008971.1 mouse_genomes_project 8 95210620 95210691 + Mir138-2 miRNA miRNA MGP_WSBEiJ_T0087748.1 MGP_WSBEiJ_G0032819.1 mouse_genomes_project 8 69978826 69988293 - MGP_WSBEiJ_P0087748 Rfxank protein_coding protein_coding MGP_WSBEiJ_T0087750.1 MGP_WSBEiJ_G0032819.1 mouse_genomes_project 8 69981412 69988313 - MGP_WSBEiJ_P0087750 Rfxank protein_coding unknown_likely_coding MGP_WSBEiJ_T0089060.1 MGP_WSBEiJ_G0033246.1 mouse_genomes_project 8 111962531 111972859 + MGP_WSBEiJ_P0089060 Zfp612 protein_coding protein_coding MGP_WSBEiJ_T0010811.1 MGP_WSBEiJ_G0008968.1 mouse_genomes_project 8 87029691 87029813 + Gm44348 miRNA miRNA MGP_WSBEiJ_T0088723.1 MGP_WSBEiJ_G0033112.1 mouse_genomes_project 8 96248570 96254388 - MGP_WSBEiJ_P0088723 Zfp319 protein_coding protein_coding MGP_WSBEiJ_T0005280.1 MGP_WSBEiJ_G0004472.1 mouse_genomes_project 8 58006749 58007778 + Gm15882 antisense antisense MGP_WSBEiJ_T0097118.1 MGP_WSBEiJ_G0035799.1 mouse_genomes_project 8 130660968 130661086 + Gm22968 rRNA rRNA MGP_WSBEiJ_T0087701.1 MGP_WSBEiJ_G0032802.1 mouse_genomes_project 8 69570877 69579133 - MGP_WSBEiJ_P0087701 Zfp963 protein_coding protein_coding MGP_WSBEiJ_T0087703.1 MGP_WSBEiJ_G0032802.1 mouse_genomes_project 8 69572172 69579141 - MGP_WSBEiJ_P0087703 Zfp963 protein_coding protein_coding MGP_WSBEiJ_T0098572.1 MGP_WSBEiJ_G0037235.1 mouse_genomes_project 8 125791697 125791804 - Gm24445 snRNA snRNA MGP_WSBEiJ_T0088931.1 MGP_WSBEiJ_G0033201.1 mouse_genomes_project 8 107648816 107677550 + MGP_WSBEiJ_P0088931 Dus2 protein_coding protein_coding MGP_WSBEiJ_T0088933.1 MGP_WSBEiJ_G0033201.1 mouse_genomes_project 8 107673199 107721125 + MGP_WSBEiJ_P0088933 Dus2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088934.1 MGP_WSBEiJ_G0033201.1 mouse_genomes_project 8 107673199 107721104 + MGP_WSBEiJ_P0088934 Dus2 protein_coding protein_coding MGP_WSBEiJ_T0088935.1 MGP_WSBEiJ_G0033201.1 mouse_genomes_project 8 107673214 107693196 + Dus2 protein_coding retained_intron MGP_WSBEiJ_T0088936.1 MGP_WSBEiJ_G0033201.1 mouse_genomes_project 8 107697051 107710865 + Dus2 protein_coding retained_intron MGP_WSBEiJ_T0088937.1 MGP_WSBEiJ_G0033201.1 mouse_genomes_project 8 107715992 107719484 + Dus2 protein_coding retained_intron MGP_WSBEiJ_T0088155.1 MGP_WSBEiJ_G0032940.1 mouse_genomes_project 8 79392956 79414585 - MGP_WSBEiJ_P0088155 Mmaa protein_coding unknown_likely_coding MGP_WSBEiJ_T0089669.1 MGP_WSBEiJ_G0033428.1 mouse_genomes_project 8 131457124 131579733 + MGP_WSBEiJ_P0089669 Nrp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089670.1 MGP_WSBEiJ_G0033428.1 mouse_genomes_project 8 131458898 131607922 + MGP_WSBEiJ_P0089670 Nrp1 protein_coding protein_coding MGP_WSBEiJ_T0089159.1 MGP_WSBEiJ_G0033275.1 mouse_genomes_project 8 113912363 113926772 - MGP_WSBEiJ_P0089159 Tmem170 protein_coding protein_coding MGP_WSBEiJ_T0087525.1 MGP_WSBEiJ_G0032753.1 mouse_genomes_project 8 56911117 56916283 - MGP_WSBEiJ_P0087525 Sap30 protein_coding protein_coding MGP_WSBEiJ_T0089101.1 MGP_WSBEiJ_G0033260.1 mouse_genomes_project 8 112959815 112991010 - MGP_WSBEiJ_P0089101 Ddx19b protein_coding protein_coding MGP_WSBEiJ_T0089102.1 MGP_WSBEiJ_G0033260.1 mouse_genomes_project 8 112963286 112994954 - MGP_WSBEiJ_P0089102 Ddx19b protein_coding protein_coding MGP_WSBEiJ_T0088627.1 MGP_WSBEiJ_G0033081.1 mouse_genomes_project 8 94897476 94928395 + MGP_WSBEiJ_P0088627 Ogfod1 protein_coding protein_coding MGP_WSBEiJ_T0088628.1 MGP_WSBEiJ_G0033081.1 mouse_genomes_project 8 94897516 94928395 + MGP_WSBEiJ_P0088628 Ogfod1 protein_coding protein_coding MGP_WSBEiJ_T0088629.1 MGP_WSBEiJ_G0033081.1 mouse_genomes_project 8 94897538 94899730 + Ogfod1 protein_coding retained_intron MGP_WSBEiJ_T0088630.1 MGP_WSBEiJ_G0033081.1 mouse_genomes_project 8 94897541 94918218 + Ogfod1 protein_coding processed_transcript MGP_WSBEiJ_T0088631.1 MGP_WSBEiJ_G0033081.1 mouse_genomes_project 8 94897569 94928395 + MGP_WSBEiJ_P0088631 Ogfod1 protein_coding protein_coding MGP_WSBEiJ_T0088632.1 MGP_WSBEiJ_G0033081.1 mouse_genomes_project 8 94897574 94916556 + Ogfod1 protein_coding processed_transcript MGP_WSBEiJ_T0088633.1 MGP_WSBEiJ_G0033081.1 mouse_genomes_project 8 94915503 94918219 + Ogfod1 protein_coding retained_intron MGP_WSBEiJ_T0088796.1 MGP_WSBEiJ_G0033142.1 mouse_genomes_project 8 106116928 106122304 + MGP_WSBEiJ_P0088796 Pdp2 protein_coding protein_coding MGP_WSBEiJ_T0005326.1 MGP_WSBEiJ_G0004512.1 mouse_genomes_project 8 127171936 127173312 - 1810008B01Rik antisense antisense MGP_WSBEiJ_T0086707.1 MGP_WSBEiJ_G0032471.1 mouse_genomes_project 8 1687045 1728699 - MGP_WSBEiJ_P0086707 Shcbp1 protein_coding protein_coding MGP_WSBEiJ_T0086839.1 MGP_WSBEiJ_G0032513.1 mouse_genomes_project 8 10775378 10801349 + MGP_WSBEiJ_P0086839 Tmem255b protein_coding protein_coding MGP_WSBEiJ_T0086840.1 MGP_WSBEiJ_G0032513.1 mouse_genomes_project 8 10775378 10801349 + MGP_WSBEiJ_P0086840 Tmem255b protein_coding protein_coding MGP_WSBEiJ_T0088866.1 MGP_WSBEiJ_G0033172.1 mouse_genomes_project 8 106977246 107009067 - MGP_WSBEiJ_P0088866 Kctd19 protein_coding protein_coding MGP_WSBEiJ_T0088867.1 MGP_WSBEiJ_G0033172.1 mouse_genomes_project 8 106977246 107009067 - MGP_WSBEiJ_P0088867 Kctd19 protein_coding protein_coding MGP_WSBEiJ_T0088868.1 MGP_WSBEiJ_G0033172.1 mouse_genomes_project 8 106977381 106979830 - MGP_WSBEiJ_P0088868 Kctd19 protein_coding protein_coding MGP_WSBEiJ_T0088869.1 MGP_WSBEiJ_G0033172.1 mouse_genomes_project 8 106988238 107009021 - MGP_WSBEiJ_P0088869 Kctd19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0017889.1 MGP_WSBEiJ_G0015144.1 mouse_genomes_project 8 107806543 107809244 + 1810019D21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017890.1 MGP_WSBEiJ_G0015144.1 mouse_genomes_project 8 107806578 107809035 + 1810019D21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017891.1 MGP_WSBEiJ_G0015144.1 mouse_genomes_project 8 107808208 107809669 + 1810019D21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0101123.1 MGP_WSBEiJ_G0039580.1 mouse_genomes_project 8 16987402 16989242 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0005297.1 MGP_WSBEiJ_G0004487.1 mouse_genomes_project 8 95267786 95275519 - Gm15890 antisense antisense MGP_WSBEiJ_T0086590.1 MGP_WSBEiJ_G0032440.1 mouse_genomes_project 8 497680 503441 + protein_coding retained_intron MGP_WSBEiJ_T0086591.1 MGP_WSBEiJ_G0032440.1 mouse_genomes_project 8 497685 508406 + protein_coding retained_intron MGP_WSBEiJ_T0088547.1 MGP_WSBEiJ_G0033055.1 mouse_genomes_project 8 90867422 90974617 - MGP_WSBEiJ_P0088547 Tox3 protein_coding protein_coding MGP_WSBEiJ_T0088548.1 MGP_WSBEiJ_G0033055.1 mouse_genomes_project 8 90873084 90974405 - MGP_WSBEiJ_P0088548 Tox3 protein_coding protein_coding MGP_WSBEiJ_T0088549.1 MGP_WSBEiJ_G0033055.1 mouse_genomes_project 8 90879728 90974400 - MGP_WSBEiJ_P0088549 Tox3 protein_coding protein_coding MGP_WSBEiJ_T0005305.1 MGP_WSBEiJ_G0004493.1 mouse_genomes_project 8 108765100 108766644 - Gm16208 antisense antisense MGP_WSBEiJ_T0088952.1 MGP_WSBEiJ_G0033208.1 mouse_genomes_project 8 107886487 107932311 + MGP_WSBEiJ_P0088952 Prmt7 protein_coding protein_coding MGP_WSBEiJ_T0088953.1 MGP_WSBEiJ_G0033208.1 mouse_genomes_project 8 107886574 107914443 + MGP_WSBEiJ_P0088953 Prmt7 protein_coding protein_coding MGP_WSBEiJ_T0088954.1 MGP_WSBEiJ_G0033208.1 mouse_genomes_project 8 107886588 107922050 + Prmt7 protein_coding retained_intron MGP_WSBEiJ_T0088955.1 MGP_WSBEiJ_G0033208.1 mouse_genomes_project 8 107886769 107904923 + MGP_WSBEiJ_P0088955 Prmt7 protein_coding protein_coding MGP_WSBEiJ_T0088956.1 MGP_WSBEiJ_G0033208.1 mouse_genomes_project 8 107888072 107917133 + MGP_WSBEiJ_P0088956 Prmt7 protein_coding protein_coding MGP_WSBEiJ_T0088957.1 MGP_WSBEiJ_G0033208.1 mouse_genomes_project 8 107913577 107916468 + Prmt7 protein_coding processed_transcript MGP_WSBEiJ_T0088958.1 MGP_WSBEiJ_G0033208.1 mouse_genomes_project 8 107916834 107923582 + Prmt7 protein_coding processed_transcript MGP_WSBEiJ_T0088206.1 MGP_WSBEiJ_G0032959.1 mouse_genomes_project 8 83638592 83672810 + MGP_WSBEiJ_P0088206 Mgat4d protein_coding protein_coding MGP_WSBEiJ_T0088207.1 MGP_WSBEiJ_G0032959.1 mouse_genomes_project 8 83651974 83677038 + Mgat4d protein_coding processed_transcript MGP_WSBEiJ_T0087416.1 MGP_WSBEiJ_G0032716.1 mouse_genomes_project 8 45246604 45251090 - MGP_WSBEiJ_P0087416 Slc25a4 protein_coding protein_coding MGP_WSBEiJ_T0087417.1 MGP_WSBEiJ_G0032716.1 mouse_genomes_project 8 45247774 45250836 - Slc25a4 protein_coding retained_intron MGP_WSBEiJ_T0088414.1 MGP_WSBEiJ_G0033013.1 mouse_genomes_project 8 85392207 85394048 - MGP_WSBEiJ_P0088414 Junb protein_coding protein_coding MGP_WSBEiJ_T0088491.1 MGP_WSBEiJ_G0033037.1 mouse_genomes_project 8 87071971 87158532 + MGP_WSBEiJ_P0088491 Lonp2 protein_coding protein_coding MGP_WSBEiJ_T0088492.1 MGP_WSBEiJ_G0033037.1 mouse_genomes_project 8 87071971 87165695 + MGP_WSBEiJ_P0088492 Lonp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088493.1 MGP_WSBEiJ_G0033037.1 mouse_genomes_project 8 87072015 87089550 + Lonp2 protein_coding processed_transcript MGP_WSBEiJ_T0088494.1 MGP_WSBEiJ_G0033037.1 mouse_genomes_project 8 87072033 87158532 + MGP_WSBEiJ_P0088494 Lonp2 protein_coding protein_coding MGP_WSBEiJ_T0088495.1 MGP_WSBEiJ_G0033037.1 mouse_genomes_project 8 87079280 87113065 + Lonp2 protein_coding processed_transcript MGP_WSBEiJ_T0088496.1 MGP_WSBEiJ_G0033037.1 mouse_genomes_project 8 87099451 87158533 + MGP_WSBEiJ_P0088496 Lonp2 protein_coding protein_coding MGP_WSBEiJ_T0088497.1 MGP_WSBEiJ_G0033037.1 mouse_genomes_project 8 87099451 87158533 + MGP_WSBEiJ_P0088497 Lonp2 protein_coding protein_coding MGP_WSBEiJ_T0088342.1 MGP_WSBEiJ_G0032997.1 mouse_genomes_project 8 85098365 85101623 + MGP_WSBEiJ_P0088342 Lyl1 protein_coding protein_coding MGP_WSBEiJ_T0088655.1 MGP_WSBEiJ_G0033091.1 mouse_genomes_project 8 95433610 95472993 + MGP_WSBEiJ_P0088655 Cpne2 protein_coding protein_coding MGP_WSBEiJ_T0088656.1 MGP_WSBEiJ_G0033091.1 mouse_genomes_project 8 95433659 95449982 + Cpne2 protein_coding retained_intron MGP_WSBEiJ_T0088657.1 MGP_WSBEiJ_G0033091.1 mouse_genomes_project 8 95433687 95450977 + Cpne2 protein_coding processed_transcript MGP_WSBEiJ_T0088658.1 MGP_WSBEiJ_G0033091.1 mouse_genomes_project 8 95433687 95472854 + MGP_WSBEiJ_P0088658 Cpne2 protein_coding protein_coding MGP_WSBEiJ_T0088659.1 MGP_WSBEiJ_G0033091.1 mouse_genomes_project 8 95463751 95471235 + Cpne2 protein_coding retained_intron MGP_WSBEiJ_T0086927.1 MGP_WSBEiJ_G0032539.1 mouse_genomes_project 8 16458287 16463176 - MGP_WSBEiJ_P0086927 Defb40 protein_coding protein_coding MGP_WSBEiJ_T0089556.1 MGP_WSBEiJ_G0033391.1 mouse_genomes_project 8 126706703 126707098 + MGP_WSBEiJ_P0089556 protein_coding protein_coding MGP_WSBEiJ_T0010767.1 MGP_WSBEiJ_G0008924.1 mouse_genomes_project 8 10503004 10503072 - Mir1968 miRNA miRNA MGP_WSBEiJ_T0088454.1 MGP_WSBEiJ_G0033025.1 mouse_genomes_project 8 85534215 85549133 - MGP_WSBEiJ_P0088454 Zfp791 protein_coding protein_coding MGP_WSBEiJ_T0088287.1 MGP_WSBEiJ_G0032989.1 mouse_genomes_project 8 84598726 84604367 - MGP_WSBEiJ_P0088287 D8Ertd738e protein_coding protein_coding MGP_WSBEiJ_T0089170.1 MGP_WSBEiJ_G0033282.1 mouse_genomes_project 8 114688878 114993487 + Cntnap4 protein_coding retained_intron MGP_WSBEiJ_T0089171.1 MGP_WSBEiJ_G0033282.1 mouse_genomes_project 8 114688878 115016639 + MGP_WSBEiJ_P0089171 Cntnap4 protein_coding protein_coding MGP_WSBEiJ_T0089172.1 MGP_WSBEiJ_G0033282.1 mouse_genomes_project 8 114688878 115016651 + MGP_WSBEiJ_P0089172 Cntnap4 protein_coding protein_coding MGP_WSBEiJ_T0089173.1 MGP_WSBEiJ_G0033282.1 mouse_genomes_project 8 114688890 114923516 + Cntnap4 protein_coding retained_intron MGP_WSBEiJ_T0089174.1 MGP_WSBEiJ_G0033282.1 mouse_genomes_project 8 114855170 114857340 + Cntnap4 protein_coding processed_transcript MGP_WSBEiJ_T0089175.1 MGP_WSBEiJ_G0033282.1 mouse_genomes_project 8 114907086 114927960 + Cntnap4 protein_coding processed_transcript MGP_WSBEiJ_T0089155.1 MGP_WSBEiJ_G0033272.1 mouse_genomes_project 8 113714572 113720788 - MGP_WSBEiJ_P0089155 Ctrb1 protein_coding protein_coding MGP_WSBEiJ_T0086588.1 MGP_WSBEiJ_G0032439.1 mouse_genomes_project 8 430888 460637 + MGP_WSBEiJ_P0086588 Pnpla6 protein_coding protein_coding MGP_WSBEiJ_T0086589.1 MGP_WSBEiJ_G0032439.1 mouse_genomes_project 8 430888 460637 + MGP_WSBEiJ_P0086589 Pnpla6 protein_coding protein_coding MGP_WSBEiJ_T0010843.1 MGP_WSBEiJ_G0009000.1 mouse_genomes_project 8 126889178 126889260 + Mir1967 miRNA miRNA MGP_WSBEiJ_T0099775.1 MGP_WSBEiJ_G0038438.1 mouse_genomes_project 8 37801009 37801142 - Gm23128 snoRNA snoRNA MGP_WSBEiJ_T0087427.1 MGP_WSBEiJ_G0032719.1 mouse_genomes_project 8 45605788 45634627 + MGP_WSBEiJ_P0087427 Cenpu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087428.1 MGP_WSBEiJ_G0032719.1 mouse_genomes_project 8 45605793 45634203 + MGP_WSBEiJ_P0087428 Cenpu protein_coding protein_coding MGP_WSBEiJ_T0087429.1 MGP_WSBEiJ_G0032719.1 mouse_genomes_project 8 45605794 45609958 + Cenpu protein_coding retained_intron MGP_WSBEiJ_T0087430.1 MGP_WSBEiJ_G0032719.1 mouse_genomes_project 8 45605820 45632972 + MGP_WSBEiJ_P0087430 Cenpu protein_coding protein_coding MGP_WSBEiJ_T0087431.1 MGP_WSBEiJ_G0032719.1 mouse_genomes_project 8 45613811 45617100 + Cenpu protein_coding processed_transcript MGP_WSBEiJ_T0087432.1 MGP_WSBEiJ_G0032719.1 mouse_genomes_project 8 45616376 45627428 + Cenpu protein_coding retained_intron MGP_WSBEiJ_T0087433.1 MGP_WSBEiJ_G0032719.1 mouse_genomes_project 8 45627770 45632982 + Cenpu protein_coding retained_intron MGP_WSBEiJ_T0088982.1 MGP_WSBEiJ_G0033221.1 mouse_genomes_project 8 108782903 108795135 - MGP_WSBEiJ_P0088982 Cog8 protein_coding protein_coding MGP_WSBEiJ_T0088983.1 MGP_WSBEiJ_G0033221.1 mouse_genomes_project 8 108782909 108795130 - MGP_WSBEiJ_P0088983 Cog8 protein_coding protein_coding MGP_WSBEiJ_T0088985.1 MGP_WSBEiJ_G0033221.1 mouse_genomes_project 8 108791123 108792703 - Cog8 protein_coding retained_intron MGP_WSBEiJ_T0088986.1 MGP_WSBEiJ_G0033221.1 mouse_genomes_project 8 108791353 108794944 - MGP_WSBEiJ_P0088986 Cog8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088591.1 MGP_WSBEiJ_G0033071.1 mouse_genomes_project 8 93829880 93867460 - MGP_WSBEiJ_P0088591 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088592.1 MGP_WSBEiJ_G0033071.1 mouse_genomes_project 8 93836590 93858239 - protein_coding retained_intron MGP_WSBEiJ_T0088593.1 MGP_WSBEiJ_G0033071.1 mouse_genomes_project 8 93838025 93847620 - MGP_WSBEiJ_P0088593 protein_coding protein_coding MGP_WSBEiJ_T0008937.1 MGP_WSBEiJ_G0007195.1 mouse_genomes_project 8 31272029 31340745 - Gm3985 lincRNA lincRNA MGP_WSBEiJ_T0008938.1 MGP_WSBEiJ_G0007195.1 mouse_genomes_project 8 31275907 31329148 - Gm3985 lincRNA lincRNA MGP_WSBEiJ_T0089325.1 MGP_WSBEiJ_G0033333.1 mouse_genomes_project 8 123324594 123330569 + MGP_WSBEiJ_P0089325 Cox4i1 protein_coding protein_coding MGP_WSBEiJ_T0089326.1 MGP_WSBEiJ_G0033333.1 mouse_genomes_project 8 123324627 123326187 + Cox4i1 protein_coding retained_intron MGP_WSBEiJ_T0089327.1 MGP_WSBEiJ_G0033333.1 mouse_genomes_project 8 123324702 123330401 + MGP_WSBEiJ_P0089327 Cox4i1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089328.1 MGP_WSBEiJ_G0033333.1 mouse_genomes_project 8 123328945 123330469 + Cox4i1 protein_coding retained_intron MGP_WSBEiJ_T0089329.1 MGP_WSBEiJ_G0033333.1 mouse_genomes_project 8 123329507 123330563 + Cox4i1 protein_coding retained_intron MGP_WSBEiJ_T0089124.1 MGP_WSBEiJ_G0033265.1 mouse_genomes_project 8 113249499 113287101 - MGP_WSBEiJ_P0089124 Rfwd3 protein_coding protein_coding MGP_WSBEiJ_T0089125.1 MGP_WSBEiJ_G0033265.1 mouse_genomes_project 8 113251039 113283220 - MGP_WSBEiJ_P0089125 Rfwd3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0015467.1 MGP_WSBEiJ_G0013597.1 mouse_genomes_project 8 66372665 66372962 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008973.1 MGP_WSBEiJ_G0007225.1 mouse_genomes_project 8 84218967 84231538 - Gm26721 lincRNA lincRNA MGP_WSBEiJ_T0089117.1 MGP_WSBEiJ_G0033263.1 mouse_genomes_project 8 113059062 113080372 + MGP_WSBEiJ_P0089117 Pdpr protein_coding protein_coding MGP_WSBEiJ_T0089118.1 MGP_WSBEiJ_G0033263.1 mouse_genomes_project 8 113059073 113105897 + MGP_WSBEiJ_P0089118 Pdpr protein_coding protein_coding MGP_WSBEiJ_T0089119.1 MGP_WSBEiJ_G0033263.1 mouse_genomes_project 8 113059087 113103970 + MGP_WSBEiJ_P0089119 Pdpr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009035.1 MGP_WSBEiJ_G0007267.1 mouse_genomes_project 8 123244080 123244806 + Gm26739 lincRNA lincRNA MGP_WSBEiJ_T0089180.1 MGP_WSBEiJ_G0033285.1 mouse_genomes_project 8 115871886 116035040 - MGP_WSBEiJ_P0089180 Adamts18 protein_coding protein_coding MGP_WSBEiJ_T0017885.1 MGP_WSBEiJ_G0015142.1 mouse_genomes_project 8 96747383 96762072 + 4930513N10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017886.1 MGP_WSBEiJ_G0015142.1 mouse_genomes_project 8 96747526 96750767 + 4930513N10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017887.1 MGP_WSBEiJ_G0015142.1 mouse_genomes_project 8 96749586 96762041 + 4930513N10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0096864.1 MGP_WSBEiJ_G0035545.1 mouse_genomes_project 8 126712525 126713528 + pseudogene pseudogene MGP_WSBEiJ_T0089045.1 MGP_WSBEiJ_G0033240.1 mouse_genomes_project 8 111588808 111602815 - MGP_WSBEiJ_P0089045 Atxn1l protein_coding protein_coding MGP_WSBEiJ_T0088609.1 MGP_WSBEiJ_G0033077.1 mouse_genomes_project 8 94254176 94286853 - MGP_WSBEiJ_P0088609 Ces5a protein_coding protein_coding MGP_WSBEiJ_T0089461.1 MGP_WSBEiJ_G0033367.1 mouse_genomes_project 8 125690918 125783671 - MGP_WSBEiJ_P0089461 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089462.1 MGP_WSBEiJ_G0033367.1 mouse_genomes_project 8 125691247 125703869 - MGP_WSBEiJ_P0089462 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089463.1 MGP_WSBEiJ_G0033367.1 mouse_genomes_project 8 125704120 125724239 - MGP_WSBEiJ_P0089463 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089464.1 MGP_WSBEiJ_G0033367.1 mouse_genomes_project 8 125713911 125783651 - protein_coding retained_intron MGP_WSBEiJ_T0086739.1 MGP_WSBEiJ_G0032489.1 mouse_genomes_project 8 8850300 8874458 - MGP_WSBEiJ_P0086739 Ankrd10 protein_coding protein_coding MGP_WSBEiJ_T0086740.1 MGP_WSBEiJ_G0032489.1 mouse_genomes_project 8 8852868 8874458 - MGP_WSBEiJ_P0086740 Ankrd10 protein_coding protein_coding MGP_WSBEiJ_T0087706.1 MGP_WSBEiJ_G0032805.1 mouse_genomes_project 8 69620474 69636936 + MGP_WSBEiJ_P0087706 Atp13a1 protein_coding protein_coding MGP_WSBEiJ_T0008988.1 MGP_WSBEiJ_G0007239.1 mouse_genomes_project 8 87959820 88013651 + Gm2694 lincRNA lincRNA MGP_WSBEiJ_T0008989.1 MGP_WSBEiJ_G0007239.1 mouse_genomes_project 8 87959820 88013650 + Gm2694 lincRNA lincRNA MGP_WSBEiJ_T0008990.1 MGP_WSBEiJ_G0007239.1 mouse_genomes_project 8 87959820 88011259 + Gm2694 lincRNA lincRNA MGP_WSBEiJ_T0008991.1 MGP_WSBEiJ_G0007239.1 mouse_genomes_project 8 87959852 88013649 + Gm2694 lincRNA lincRNA MGP_WSBEiJ_T0008992.1 MGP_WSBEiJ_G0007239.1 mouse_genomes_project 8 87960124 88013105 + Gm2694 lincRNA lincRNA MGP_WSBEiJ_T0008993.1 MGP_WSBEiJ_G0007239.1 mouse_genomes_project 8 87960142 88013651 + Gm2694 lincRNA lincRNA MGP_WSBEiJ_T0008994.1 MGP_WSBEiJ_G0007239.1 mouse_genomes_project 8 87960165 87989210 + Gm2694 lincRNA lincRNA MGP_WSBEiJ_T0099807.1 MGP_WSBEiJ_G0038470.1 mouse_genomes_project 8 96691389 96691524 - Gm26265 snoRNA snoRNA MGP_WSBEiJ_T0088248.1 MGP_WSBEiJ_G0032971.1 mouse_genomes_project 8 84264260 84287343 - MGP_WSBEiJ_P0088248 Gm10644 protein_coding protein_coding MGP_WSBEiJ_T0089628.1 MGP_WSBEiJ_G0033417.1 mouse_genomes_project 8 128696732 128849288 - MGP_WSBEiJ_P0089628 Pcnx2 protein_coding protein_coding MGP_WSBEiJ_T0089629.1 MGP_WSBEiJ_G0033417.1 mouse_genomes_project 8 128696733 128787019 - Pcnx2 protein_coding retained_intron MGP_WSBEiJ_T0089630.1 MGP_WSBEiJ_G0033417.1 mouse_genomes_project 8 128696735 128721285 - Pcnx2 protein_coding retained_intron MGP_WSBEiJ_T0089631.1 MGP_WSBEiJ_G0033417.1 mouse_genomes_project 8 128774451 128776284 - Pcnx2 protein_coding retained_intron MGP_WSBEiJ_T0089632.1 MGP_WSBEiJ_G0033417.1 mouse_genomes_project 8 128784785 128849288 - MGP_WSBEiJ_P0089632 Pcnx2 protein_coding protein_coding MGP_WSBEiJ_T0089633.1 MGP_WSBEiJ_G0033417.1 mouse_genomes_project 8 128808280 128849246 - Pcnx2 protein_coding processed_transcript MGP_WSBEiJ_T0087746.1 MGP_WSBEiJ_G0032817.1 mouse_genomes_project 8 69931864 69939178 + MGP_WSBEiJ_P0087746 Hapln4 protein_coding protein_coding MGP_WSBEiJ_T0005244.1 MGP_WSBEiJ_G0004445.1 mouse_genomes_project 8 646883 677839 + Gm16553 antisense antisense MGP_WSBEiJ_T0088808.1 MGP_WSBEiJ_G0033149.1 mouse_genomes_project 8 106483989 106492398 + MGP_WSBEiJ_P0088808 Ces2e protein_coding protein_coding MGP_WSBEiJ_T0088809.1 MGP_WSBEiJ_G0033149.1 mouse_genomes_project 8 106483989 106492398 + MGP_WSBEiJ_P0088809 Ces2e protein_coding protein_coding MGP_WSBEiJ_T0098573.1 MGP_WSBEiJ_G0037236.1 mouse_genomes_project 8 127224693 127224779 + Gm24459 snRNA snRNA MGP_WSBEiJ_T0098559.1 MGP_WSBEiJ_G0037222.1 mouse_genomes_project 8 99717503 99717629 - Gm23494 snRNA snRNA MGP_WSBEiJ_T0098567.1 MGP_WSBEiJ_G0037230.1 mouse_genomes_project 8 115706242 115706404 - Gm24291 snRNA snRNA MGP_WSBEiJ_T0096851.1 MGP_WSBEiJ_G0035532.1 mouse_genomes_project 8 23705224 23707777 + pseudogene pseudogene MGP_WSBEiJ_T0086736.1 MGP_WSBEiJ_G0032487.1 mouse_genomes_project 8 8733357 8779328 - MGP_WSBEiJ_P0086736 Cars2 protein_coding protein_coding MGP_WSBEiJ_T0086737.1 MGP_WSBEiJ_G0032487.1 mouse_genomes_project 8 8733359 8779234 - MGP_WSBEiJ_P0086737 Cars2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0008981.1 MGP_WSBEiJ_G0007233.1 mouse_genomes_project 8 87585550 87675400 + Gm27246 lincRNA lincRNA MGP_WSBEiJ_T0088566.1 MGP_WSBEiJ_G0033060.1 mouse_genomes_project 8 91885278 91986145 - MGP_WSBEiJ_P0088566 Rpgrip1l protein_coding protein_coding MGP_WSBEiJ_T0088567.1 MGP_WSBEiJ_G0033060.1 mouse_genomes_project 8 91887195 91986106 - MGP_WSBEiJ_P0088567 Rpgrip1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088568.1 MGP_WSBEiJ_G0033060.1 mouse_genomes_project 8 91940217 91949608 - Rpgrip1l protein_coding retained_intron MGP_WSBEiJ_T0088569.1 MGP_WSBEiJ_G0033060.1 mouse_genomes_project 8 91980826 91983896 - MGP_WSBEiJ_P0088569 Rpgrip1l protein_coding protein_coding MGP_WSBEiJ_T0088903.1 MGP_WSBEiJ_G0033188.1 mouse_genomes_project 8 107471045 107490788 + MGP_WSBEiJ_P0088903 Tsnaxip1 protein_coding protein_coding MGP_WSBEiJ_T0099783.1 MGP_WSBEiJ_G0038446.1 mouse_genomes_project 8 55920974 55921106 - Gm24375 snoRNA snoRNA MGP_WSBEiJ_T0002296.1 MGP_WSBEiJ_G0002213.1 mouse_genomes_project 8 122718835 122720365 + TEC TEC MGP_WSBEiJ_T0087693.1 MGP_WSBEiJ_G0032799.1 mouse_genomes_project 8 69435259 69450492 - MGP_WSBEiJ_P0087693 Zfp868 protein_coding protein_coding MGP_WSBEiJ_T0087694.1 MGP_WSBEiJ_G0032799.1 mouse_genomes_project 8 69435816 69443776 - MGP_WSBEiJ_P0087694 Zfp868 protein_coding protein_coding MGP_WSBEiJ_T0087695.1 MGP_WSBEiJ_G0032799.1 mouse_genomes_project 8 69436822 69438463 - Zfp868 protein_coding retained_intron MGP_WSBEiJ_T0087696.1 MGP_WSBEiJ_G0032799.1 mouse_genomes_project 8 69443289 69450489 - Zfp868 protein_coding retained_intron MGP_WSBEiJ_T0088878.1 MGP_WSBEiJ_G0033176.1 mouse_genomes_project 8 107121461 107126686 + MGP_WSBEiJ_P0088878 Hsd11b2 protein_coding protein_coding MGP_WSBEiJ_T0087661.1 MGP_WSBEiJ_G0032792.1 mouse_genomes_project 8 68594598 68629645 + MGP_WSBEiJ_P0087661 Ints10 protein_coding protein_coding MGP_WSBEiJ_T0087662.1 MGP_WSBEiJ_G0032792.1 mouse_genomes_project 8 68594604 68622724 + MGP_WSBEiJ_P0087662 Ints10 protein_coding protein_coding MGP_WSBEiJ_T0087663.1 MGP_WSBEiJ_G0032792.1 mouse_genomes_project 8 68594625 68599378 + Ints10 protein_coding retained_intron MGP_WSBEiJ_T0087664.1 MGP_WSBEiJ_G0032792.1 mouse_genomes_project 8 68594625 68629643 + MGP_WSBEiJ_P0087664 Ints10 protein_coding protein_coding MGP_WSBEiJ_T0087665.1 MGP_WSBEiJ_G0032792.1 mouse_genomes_project 8 68594643 68599378 + Ints10 protein_coding retained_intron MGP_WSBEiJ_T0087666.1 MGP_WSBEiJ_G0032792.1 mouse_genomes_project 8 68594684 68629643 + MGP_WSBEiJ_P0087666 Ints10 protein_coding protein_coding MGP_WSBEiJ_T0087667.1 MGP_WSBEiJ_G0032792.1 mouse_genomes_project 8 68612406 68615058 + Ints10 protein_coding retained_intron MGP_WSBEiJ_T0087668.1 MGP_WSBEiJ_G0032792.1 mouse_genomes_project 8 68621098 68627755 + MGP_WSBEiJ_P0087668 Ints10 protein_coding protein_coding MGP_WSBEiJ_T0087355.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44507263 44839802 + MGP_WSBEiJ_P0087355 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087356.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44507269 44788780 + Sorbs2 protein_coding retained_intron MGP_WSBEiJ_T0087357.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44507273 44806497 + MGP_WSBEiJ_P0087357 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087358.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44507293 44787311 + MGP_WSBEiJ_P0087358 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087359.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44629988 44753802 + MGP_WSBEiJ_P0087359 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087360.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44630046 44839769 + MGP_WSBEiJ_P0087360 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087361.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44630215 44753824 + MGP_WSBEiJ_P0087361 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087362.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44630428 44652237 + Sorbs2 protein_coding processed_transcript MGP_WSBEiJ_T0087363.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44630444 44754627 + MGP_WSBEiJ_P0087363 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087364.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44661221 44832959 + MGP_WSBEiJ_P0087364 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087365.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44661600 44787311 + MGP_WSBEiJ_P0087365 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087366.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44661606 44839799 + MGP_WSBEiJ_P0087366 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087367.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44661626 44753661 + Sorbs2 protein_coding retained_intron MGP_WSBEiJ_T0087368.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44661639 44754584 + MGP_WSBEiJ_P0087368 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087369.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44661714 44750414 + Sorbs2 protein_coding retained_intron MGP_WSBEiJ_T0087370.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44661734 44783034 + MGP_WSBEiJ_P0087370 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087371.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44664920 44767675 + MGP_WSBEiJ_P0087371 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087372.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44691763 44767724 + MGP_WSBEiJ_P0087372 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087373.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44691767 44767684 + MGP_WSBEiJ_P0087373 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087374.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44739829 44839808 + MGP_WSBEiJ_P0087374 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087375.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44772759 44839800 + MGP_WSBEiJ_P0087375 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087376.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44773499 44810827 + Sorbs2 protein_coding processed_transcript MGP_WSBEiJ_T0087377.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44780221 44803985 + MGP_WSBEiJ_P0087377 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087378.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44780935 44803953 + MGP_WSBEiJ_P0087378 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087379.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44782734 44786329 + Sorbs2 protein_coding retained_intron MGP_WSBEiJ_T0087380.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44786104 44806171 + MGP_WSBEiJ_P0087380 Sorbs2 protein_coding protein_coding MGP_WSBEiJ_T0087381.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44815025 44815737 + Sorbs2 protein_coding retained_intron MGP_WSBEiJ_T0087382.1 MGP_WSBEiJ_G0032707.1 mouse_genomes_project 8 44817621 44819185 + Sorbs2 protein_coding processed_transcript MGP_WSBEiJ_T0008971.1 MGP_WSBEiJ_G0007224.1 mouse_genomes_project 8 81903882 81905080 - 4930579O11Rik lincRNA lincRNA MGP_WSBEiJ_T0008972.1 MGP_WSBEiJ_G0007224.1 mouse_genomes_project 8 81903910 81905126 - 4930579O11Rik lincRNA lincRNA MGP_WSBEiJ_T0089046.1 MGP_WSBEiJ_G0033241.1 mouse_genomes_project 8 111640184 111731277 + MGP_WSBEiJ_P0089046 Ap1g1 protein_coding protein_coding MGP_WSBEiJ_T0089047.1 MGP_WSBEiJ_G0033241.1 mouse_genomes_project 8 111640527 111668951 + Ap1g1 protein_coding processed_transcript MGP_WSBEiJ_T0089048.1 MGP_WSBEiJ_G0033241.1 mouse_genomes_project 8 111640536 111728431 + MGP_WSBEiJ_P0089048 Ap1g1 protein_coding protein_coding MGP_WSBEiJ_T0089049.1 MGP_WSBEiJ_G0033241.1 mouse_genomes_project 8 111709173 111715685 + Ap1g1 protein_coding retained_intron MGP_WSBEiJ_T0089050.1 MGP_WSBEiJ_G0033241.1 mouse_genomes_project 8 111725520 111727363 + Ap1g1 protein_coding retained_intron MGP_WSBEiJ_T0089051.1 MGP_WSBEiJ_G0033241.1 mouse_genomes_project 8 111730180 111731276 + MGP_WSBEiJ_P0089051 Ap1g1 protein_coding protein_coding MGP_WSBEiJ_T0088622.1 MGP_WSBEiJ_G0033079.1 mouse_genomes_project 8 94748837 94873396 - MGP_WSBEiJ_P0088622 Amfr protein_coding protein_coding MGP_WSBEiJ_T0088623.1 MGP_WSBEiJ_G0033079.1 mouse_genomes_project 8 94750150 94752165 - Amfr protein_coding retained_intron MGP_WSBEiJ_T0088624.1 MGP_WSBEiJ_G0033079.1 mouse_genomes_project 8 94750206 94751210 - Amfr protein_coding processed_transcript MGP_WSBEiJ_T0088625.1 MGP_WSBEiJ_G0033079.1 mouse_genomes_project 8 94860038 94872854 - MGP_WSBEiJ_P0088625 Amfr protein_coding protein_coding MGP_WSBEiJ_T0005317.1 MGP_WSBEiJ_G0004504.1 mouse_genomes_project 8 119423975 119431136 + Gm15395 antisense antisense MGP_WSBEiJ_T0010773.1 MGP_WSBEiJ_G0008930.1 mouse_genomes_project 8 21123677 21123805 + Mir486 miRNA miRNA MGP_WSBEiJ_T0088081.1 MGP_WSBEiJ_G0032917.1 mouse_genomes_project 8 72618408 72685783 + MGP_WSBEiJ_P0088081 Nwd1 protein_coding protein_coding MGP_WSBEiJ_T0088082.1 MGP_WSBEiJ_G0032917.1 mouse_genomes_project 8 72618438 72667627 + MGP_WSBEiJ_P0088082 Nwd1 protein_coding protein_coding MGP_WSBEiJ_T0088083.1 MGP_WSBEiJ_G0032917.1 mouse_genomes_project 8 72618449 72681907 + MGP_WSBEiJ_P0088083 Nwd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088084.1 MGP_WSBEiJ_G0032917.1 mouse_genomes_project 8 72618498 72688638 + MGP_WSBEiJ_P0088084 Nwd1 protein_coding protein_coding MGP_WSBEiJ_T0088085.1 MGP_WSBEiJ_G0032917.1 mouse_genomes_project 8 72625169 72681977 + MGP_WSBEiJ_P0088085 Nwd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088086.1 MGP_WSBEiJ_G0032917.1 mouse_genomes_project 8 72628775 72681938 + MGP_WSBEiJ_P0088086 Nwd1 protein_coding protein_coding MGP_WSBEiJ_T0088087.1 MGP_WSBEiJ_G0032917.1 mouse_genomes_project 8 72655707 72667024 + Nwd1 protein_coding processed_transcript MGP_WSBEiJ_T0086883.1 MGP_WSBEiJ_G0032529.1 mouse_genomes_project 8 12276683 12290053 + MGP_WSBEiJ_P0086883 Cln8 protein_coding protein_coding MGP_WSBEiJ_T0086884.1 MGP_WSBEiJ_G0032529.1 mouse_genomes_project 8 12283389 12290396 + MGP_WSBEiJ_P0086884 Cln8 protein_coding protein_coding MGP_WSBEiJ_T0086885.1 MGP_WSBEiJ_G0032529.1 mouse_genomes_project 8 12283455 12297041 + MGP_WSBEiJ_P0086885 Cln8 protein_coding protein_coding MGP_WSBEiJ_T0086886.1 MGP_WSBEiJ_G0032529.1 mouse_genomes_project 8 12284348 12290123 + MGP_WSBEiJ_P0086886 Cln8 protein_coding protein_coding MGP_WSBEiJ_T0086887.1 MGP_WSBEiJ_G0032529.1 mouse_genomes_project 8 12284703 12290256 + MGP_WSBEiJ_P0086887 Cln8 protein_coding protein_coding MGP_WSBEiJ_T0086948.1 MGP_WSBEiJ_G0032558.1 mouse_genomes_project 8 18785837 18786892 - MGP_WSBEiJ_P0086948 AY761185 protein_coding protein_coding MGP_WSBEiJ_T0086822.1 MGP_WSBEiJ_G0032507.1 mouse_genomes_project 8 10544998 10581088 - MGP_WSBEiJ_P0086822 protein_coding protein_coding MGP_WSBEiJ_T0086823.1 MGP_WSBEiJ_G0032507.1 mouse_genomes_project 8 10560908 10581088 - MGP_WSBEiJ_P0086823 protein_coding protein_coding MGP_WSBEiJ_T0086824.1 MGP_WSBEiJ_G0032507.1 mouse_genomes_project 8 10567780 10568604 - protein_coding retained_intron MGP_WSBEiJ_T0086825.1 MGP_WSBEiJ_G0032507.1 mouse_genomes_project 8 10568028 10580997 - MGP_WSBEiJ_P0086825 protein_coding protein_coding MGP_WSBEiJ_T0086826.1 MGP_WSBEiJ_G0032507.1 mouse_genomes_project 8 10568160 10581022 - MGP_WSBEiJ_P0086826 protein_coding protein_coding MGP_WSBEiJ_T0101124.1 MGP_WSBEiJ_G0039581.1 mouse_genomes_project 8 18697401 18698390 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0089223.1 MGP_WSBEiJ_G0033301.1 mouse_genomes_project 8 119672780 119888757 + MGP_WSBEiJ_P0089223 Cmip protein_coding protein_coding MGP_WSBEiJ_T0089224.1 MGP_WSBEiJ_G0033301.1 mouse_genomes_project 8 119772832 119888757 + MGP_WSBEiJ_P0089224 Cmip protein_coding protein_coding MGP_WSBEiJ_T0089476.1 MGP_WSBEiJ_G0033369.1 mouse_genomes_project 8 125923239 125925997 + MGP_WSBEiJ_P0089476 protein_coding protein_coding MGP_WSBEiJ_T0089477.1 MGP_WSBEiJ_G0033369.1 mouse_genomes_project 8 125923542 125925213 + protein_coding retained_intron MGP_WSBEiJ_T0089094.1 MGP_WSBEiJ_G0033258.1 mouse_genomes_project 8 112866373 112924065 + MGP_WSBEiJ_P0089094 St3gal2 protein_coding protein_coding MGP_WSBEiJ_T0089095.1 MGP_WSBEiJ_G0033258.1 mouse_genomes_project 8 112866373 112921408 + MGP_WSBEiJ_P0089095 St3gal2 protein_coding protein_coding MGP_WSBEiJ_T0089096.1 MGP_WSBEiJ_G0033258.1 mouse_genomes_project 8 112866409 112908572 + St3gal2 protein_coding processed_transcript MGP_WSBEiJ_T0089097.1 MGP_WSBEiJ_G0033258.1 mouse_genomes_project 8 112879281 112908771 + St3gal2 protein_coding processed_transcript MGP_WSBEiJ_T0089098.1 MGP_WSBEiJ_G0033258.1 mouse_genomes_project 8 112888252 112908597 + St3gal2 protein_coding processed_transcript MGP_WSBEiJ_T0010776.1 MGP_WSBEiJ_G0008933.1 mouse_genomes_project 8 24360933 24361008 + Gm44299 miRNA miRNA MGP_WSBEiJ_T0088171.1 MGP_WSBEiJ_G0032948.1 mouse_genomes_project 8 80886119 80931966 - MGP_WSBEiJ_P0088171 Smarca5 protein_coding protein_coding MGP_WSBEiJ_T0088172.1 MGP_WSBEiJ_G0032948.1 mouse_genomes_project 8 80893074 80931966 - Smarca5 protein_coding processed_transcript MGP_WSBEiJ_T0088173.1 MGP_WSBEiJ_G0032948.1 mouse_genomes_project 8 80897178 80899453 - Smarca5 protein_coding retained_intron MGP_WSBEiJ_T0088174.1 MGP_WSBEiJ_G0032948.1 mouse_genomes_project 8 80897490 80898628 - Smarca5 protein_coding retained_intron MGP_WSBEiJ_T0088175.1 MGP_WSBEiJ_G0032948.1 mouse_genomes_project 8 80905292 80906895 - Smarca5 protein_coding retained_intron MGP_WSBEiJ_T0088176.1 MGP_WSBEiJ_G0032948.1 mouse_genomes_project 8 80917341 80918152 - Smarca5 protein_coding retained_intron MGP_WSBEiJ_T0005262.1 MGP_WSBEiJ_G0004458.1 mouse_genomes_project 8 20640654 20650037 + Gm15346 antisense antisense MGP_WSBEiJ_T0005258.1 MGP_WSBEiJ_G0004455.1 mouse_genomes_project 8 12423351 12427155 - 5830468F06Rik antisense antisense MGP_WSBEiJ_T0087632.1 MGP_WSBEiJ_G0032781.1 mouse_genomes_project 8 66251481 66264016 - Tma16 protein_coding retained_intron MGP_WSBEiJ_T0087633.1 MGP_WSBEiJ_G0032781.1 mouse_genomes_project 8 66253322 66264038 - MGP_WSBEiJ_P0087633 Tma16 protein_coding protein_coding MGP_WSBEiJ_T0087634.1 MGP_WSBEiJ_G0032781.1 mouse_genomes_project 8 66259299 66264049 - Tma16 protein_coding retained_intron MGP_WSBEiJ_T0086930.1 MGP_WSBEiJ_G0032542.1 mouse_genomes_project 8 16544819 16555307 - MGP_WSBEiJ_P0086930 Defb39 protein_coding protein_coding MGP_WSBEiJ_T0099813.1 MGP_WSBEiJ_G0038476.1 mouse_genomes_project 8 112784331 112784407 - Gm22193 snoRNA snoRNA MGP_WSBEiJ_T0015490.1 MGP_WSBEiJ_G0013620.1 mouse_genomes_project 8 89784001 89784616 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015447.1 MGP_WSBEiJ_G0013577.1 mouse_genomes_project 8 17178085 17178676 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087738.1 MGP_WSBEiJ_G0032814.1 mouse_genomes_project 8 69859204 69887100 - MGP_WSBEiJ_P0087738 Mau2 protein_coding protein_coding MGP_WSBEiJ_T0087739.1 MGP_WSBEiJ_G0032814.1 mouse_genomes_project 8 69859204 69887149 - MGP_WSBEiJ_P0087739 Mau2 protein_coding protein_coding MGP_WSBEiJ_T0088765.1 MGP_WSBEiJ_G0033129.1 mouse_genomes_project 8 105582932 105627002 + MGP_WSBEiJ_P0088765 Cdh5 protein_coding protein_coding MGP_WSBEiJ_T0005285.1 MGP_WSBEiJ_G0004477.1 mouse_genomes_project 8 67745263 67766539 + Gm15991 antisense antisense MGP_WSBEiJ_T0010779.1 MGP_WSBEiJ_G0008936.1 mouse_genomes_project 8 37036201 37036271 - Mir383 miRNA miRNA MGP_WSBEiJ_T0088542.1 MGP_WSBEiJ_G0033051.1 mouse_genomes_project 8 89264329 89323669 + MGP_WSBEiJ_P0088542 Cyld protein_coding unknown_likely_coding MGP_WSBEiJ_T0088543.1 MGP_WSBEiJ_G0033051.1 mouse_genomes_project 8 89272547 89323665 + MGP_WSBEiJ_P0088543 Cyld protein_coding protein_coding MGP_WSBEiJ_T0089568.1 MGP_WSBEiJ_G0033398.1 mouse_genomes_project 8 127237860 127314140 - MGP_WSBEiJ_P0089568 Pgbd5 protein_coding protein_coding MGP_WSBEiJ_T0089569.1 MGP_WSBEiJ_G0033398.1 mouse_genomes_project 8 127237860 127308454 - MGP_WSBEiJ_P0089569 Pgbd5 protein_coding protein_coding MGP_WSBEiJ_T0089570.1 MGP_WSBEiJ_G0033398.1 mouse_genomes_project 8 127237864 127308856 - MGP_WSBEiJ_P0089570 Pgbd5 protein_coding protein_coding MGP_WSBEiJ_T0089571.1 MGP_WSBEiJ_G0033398.1 mouse_genomes_project 8 127238834 127263437 - MGP_WSBEiJ_P0089571 Pgbd5 protein_coding protein_coding MGP_WSBEiJ_T0089572.1 MGP_WSBEiJ_G0033398.1 mouse_genomes_project 8 127240680 127245769 - Pgbd5 protein_coding processed_transcript MGP_WSBEiJ_T0089573.1 MGP_WSBEiJ_G0033398.1 mouse_genomes_project 8 127240696 127245335 - Pgbd5 protein_coding retained_intron MGP_WSBEiJ_T0088660.1 MGP_WSBEiJ_G0033092.1 mouse_genomes_project 8 95477398 95507214 - MGP_WSBEiJ_P0088660 Fam192a protein_coding protein_coding MGP_WSBEiJ_T0099787.1 MGP_WSBEiJ_G0038450.1 mouse_genomes_project 8 62757684 62757818 - Gm24236 snoRNA snoRNA MGP_WSBEiJ_T0086675.1 MGP_WSBEiJ_G0032463.1 mouse_genomes_project 8 1186161 1189283 + MGP_WSBEiJ_P0086675 Snapc2 protein_coding protein_coding MGP_WSBEiJ_T0088199.1 MGP_WSBEiJ_G0032957.1 mouse_genomes_project 8 83573194 83581242 + MGP_WSBEiJ_P0088199 Ucp1 protein_coding protein_coding MGP_WSBEiJ_T0099780.1 MGP_WSBEiJ_G0038443.1 mouse_genomes_project 8 44580898 44581030 - Gm23604 snoRNA snoRNA MGP_WSBEiJ_T0099809.1 MGP_WSBEiJ_G0038472.1 mouse_genomes_project 8 102790950 102791075 - Gm22223 snoRNA snoRNA MGP_WSBEiJ_T0086873.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 11465099 12243203 + MGP_WSBEiJ_P0086873 Dlgap2 protein_coding protein_coding MGP_WSBEiJ_T0086874.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 11465109 12243775 + MGP_WSBEiJ_P0086874 Dlgap2 protein_coding protein_coding MGP_WSBEiJ_T0086875.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 11553342 12242803 + MGP_WSBEiJ_P0086875 Dlgap2 protein_coding protein_coding MGP_WSBEiJ_T0086876.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 11553342 12243203 + MGP_WSBEiJ_P0086876 Dlgap2 protein_coding protein_coding MGP_WSBEiJ_T0086877.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 11764560 11894689 + Dlgap2 protein_coding processed_transcript MGP_WSBEiJ_T0086878.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 11764774 11919969 + Dlgap2 protein_coding processed_transcript MGP_WSBEiJ_T0086879.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 11764822 12226783 + Dlgap2 protein_coding retained_intron MGP_WSBEiJ_T0086880.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 12137997 12158888 + Dlgap2 protein_coding processed_transcript MGP_WSBEiJ_T0086882.1 MGP_WSBEiJ_G0032527.1 mouse_genomes_project 8 12175758 12243493 + Dlgap2 protein_coding processed_transcript MGP_WSBEiJ_T0088349.1 MGP_WSBEiJ_G0032998.1 mouse_genomes_project 8 85119649 85123489 + MGP_WSBEiJ_P0088349 G430095P16Rik protein_coding protein_coding MGP_WSBEiJ_T0009044.1 MGP_WSBEiJ_G0007274.1 mouse_genomes_project 8 124145838 124156965 + lincRNA lincRNA MGP_WSBEiJ_T0087691.1 MGP_WSBEiJ_G0032798.1 mouse_genomes_project 8 69113031 69150865 + MGP_WSBEiJ_P0087691 D130040H23Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0087692.1 MGP_WSBEiJ_G0032798.1 mouse_genomes_project 8 69148571 69150947 + MGP_WSBEiJ_P0087692 D130040H23Rik protein_coding protein_coding MGP_WSBEiJ_T0089498.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126070905 126084755 - Vps9d1 protein_coding retained_intron MGP_WSBEiJ_T0089499.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126070905 126084709 - MGP_WSBEiJ_P0089499 Vps9d1 protein_coding protein_coding MGP_WSBEiJ_T0089500.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126070905 126084881 - MGP_WSBEiJ_P0089500 Vps9d1 protein_coding protein_coding MGP_WSBEiJ_T0089501.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126070907 126084696 - Vps9d1 protein_coding retained_intron MGP_WSBEiJ_T0089502.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126070907 126084642 - MGP_WSBEiJ_P0089502 Vps9d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089503.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126070908 126084625 - MGP_WSBEiJ_P0089503 Vps9d1 protein_coding protein_coding MGP_WSBEiJ_T0089504.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126073496 126084638 - Vps9d1 protein_coding retained_intron MGP_WSBEiJ_T0089505.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126073692 126075480 - Vps9d1 protein_coding processed_transcript MGP_WSBEiJ_T0089506.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126075065 126076546 - Vps9d1 protein_coding processed_transcript MGP_WSBEiJ_T0089507.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126075406 126076563 - Vps9d1 protein_coding retained_intron MGP_WSBEiJ_T0089508.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126077102 126077533 - Vps9d1 protein_coding retained_intron MGP_WSBEiJ_T0089509.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126077377 126079621 - Vps9d1 protein_coding retained_intron MGP_WSBEiJ_T0089510.1 MGP_WSBEiJ_G0033377.1 mouse_genomes_project 8 126078261 126084583 - Vps9d1 protein_coding retained_intron MGP_WSBEiJ_T0089354.1 MGP_WSBEiJ_G0033338.1 mouse_genomes_project 8 123842477 123845174 + MGP_WSBEiJ_P0089354 Foxl1 protein_coding protein_coding MGP_WSBEiJ_T0017879.1 MGP_WSBEiJ_G0015139.1 mouse_genomes_project 8 85247642 85248860 + 1700122E12Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017880.1 MGP_WSBEiJ_G0015139.1 mouse_genomes_project 8 85247892 85248661 + 1700122E12Rik processed_transcript processed_transcript MGP_WSBEiJ_T0015462.1 MGP_WSBEiJ_G0013592.1 mouse_genomes_project 8 58208952 58209894 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002291.1 MGP_WSBEiJ_G0002208.1 mouse_genomes_project 8 101236597 101238617 + TEC TEC MGP_WSBEiJ_T0086957.1 MGP_WSBEiJ_G0032567.1 mouse_genomes_project 8 19721597 19757851 + MGP_WSBEiJ_P0086957 Defb10 protein_coding protein_coding MGP_WSBEiJ_T0087878.1 MGP_WSBEiJ_G0032848.1 mouse_genomes_project 8 70597986 70600868 + MGP_WSBEiJ_P0087878 Jund protein_coding protein_coding MGP_WSBEiJ_T0087344.1 MGP_WSBEiJ_G0032701.1 mouse_genomes_project 8 44055824 44075978 + MGP_WSBEiJ_P0087344 Mtnr1a protein_coding protein_coding MGP_WSBEiJ_T0087345.1 MGP_WSBEiJ_G0032701.1 mouse_genomes_project 8 44056061 44074978 + MGP_WSBEiJ_P0087345 Mtnr1a protein_coding protein_coding MGP_WSBEiJ_T0089021.1 MGP_WSBEiJ_G0033229.1 mouse_genomes_project 8 109202138 109329066 + MGP_WSBEiJ_P0089021 Wwp2 protein_coding protein_coding MGP_WSBEiJ_T0086961.1 MGP_WSBEiJ_G0032571.1 mouse_genomes_project 8 19855647 19857728 + MGP_WSBEiJ_P0086961 Defb13 protein_coding protein_coding MGP_WSBEiJ_T0086719.1 MGP_WSBEiJ_G0032480.1 mouse_genomes_project 8 7160007 7190562 + MGP_WSBEiJ_P0086719 Tnfsf13b protein_coding protein_coding MGP_WSBEiJ_T0099805.1 MGP_WSBEiJ_G0038468.1 mouse_genomes_project 8 96680803 96680939 - Gm26493 snoRNA snoRNA MGP_WSBEiJ_T0005276.1 MGP_WSBEiJ_G0004469.1 mouse_genomes_project 8 46102141 46113443 - 4930579M01Rik antisense antisense MGP_WSBEiJ_T0089447.1 MGP_WSBEiJ_G0033359.1 mouse_genomes_project 8 125364539 125366808 - MGP_WSBEiJ_P0089447 Aprt protein_coding protein_coding MGP_WSBEiJ_T0087440.1 MGP_WSBEiJ_G0032722.1 mouse_genomes_project 8 45802305 45919690 + MGP_WSBEiJ_P0087440 Irf2 protein_coding protein_coding MGP_WSBEiJ_T0002287.1 MGP_WSBEiJ_G0002205.1 mouse_genomes_project 8 75574388 75574793 - TEC TEC MGP_WSBEiJ_T0086595.1 MGP_WSBEiJ_G0032442.1 mouse_genomes_project 8 540809 554503 - Xab2 protein_coding retained_intron MGP_WSBEiJ_T0086596.1 MGP_WSBEiJ_G0032442.1 mouse_genomes_project 8 542475 554514 - MGP_WSBEiJ_P0086596 Xab2 protein_coding protein_coding MGP_WSBEiJ_T0086597.1 MGP_WSBEiJ_G0032442.1 mouse_genomes_project 8 542478 554500 - Xab2 protein_coding retained_intron MGP_WSBEiJ_T0086598.1 MGP_WSBEiJ_G0032442.1 mouse_genomes_project 8 546705 554468 - MGP_WSBEiJ_P0086598 Xab2 protein_coding protein_coding MGP_WSBEiJ_T0086599.1 MGP_WSBEiJ_G0032442.1 mouse_genomes_project 8 548383 554480 - MGP_WSBEiJ_P0086599 Xab2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086922.1 MGP_WSBEiJ_G0032538.1 mouse_genomes_project 8 16414776 16433569 - Xkr5 protein_coding processed_transcript MGP_WSBEiJ_T0086923.1 MGP_WSBEiJ_G0032538.1 mouse_genomes_project 8 16414776 16433673 - MGP_WSBEiJ_P0086923 Xkr5 protein_coding protein_coding MGP_WSBEiJ_T0086924.1 MGP_WSBEiJ_G0032538.1 mouse_genomes_project 8 16414776 16433671 - MGP_WSBEiJ_P0086924 Xkr5 protein_coding protein_coding MGP_WSBEiJ_T0086925.1 MGP_WSBEiJ_G0032538.1 mouse_genomes_project 8 16414779 16433614 - MGP_WSBEiJ_P0086925 Xkr5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086926.1 MGP_WSBEiJ_G0032538.1 mouse_genomes_project 8 16415135 16433635 - MGP_WSBEiJ_P0086926 Xkr5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010760.1 MGP_WSBEiJ_G0008917.1 mouse_genomes_project 8 2668741 2668810 + Gm22565 miRNA miRNA MGP_WSBEiJ_T0087178.1 MGP_WSBEiJ_G0032644.1 mouse_genomes_project 8 29444946 29469348 + MGP_WSBEiJ_P0087178 Rnf122 protein_coding protein_coding MGP_WSBEiJ_T0087179.1 MGP_WSBEiJ_G0032644.1 mouse_genomes_project 8 29444956 29456033 + Rnf122 protein_coding retained_intron MGP_WSBEiJ_T0087180.1 MGP_WSBEiJ_G0032644.1 mouse_genomes_project 8 29445274 29466594 + MGP_WSBEiJ_P0087180 Rnf122 protein_coding unknown_likely_coding MGP_WSBEiJ_T0015432.1 MGP_WSBEiJ_G0013562.1 mouse_genomes_project 8 985374 1001026 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011516.1 MGP_WSBEiJ_G0009673.1 mouse_genomes_project 8 29886162 29886386 - Gm23539 misc_RNA misc_RNA MGP_WSBEiJ_T0087383.1 MGP_WSBEiJ_G0032708.1 mouse_genomes_project 8 44913900 44950649 + MGP_WSBEiJ_P0087383 Pdlim3 protein_coding protein_coding MGP_WSBEiJ_T0089267.1 MGP_WSBEiJ_G0033319.1 mouse_genomes_project 8 122272490 122338331 + MGP_WSBEiJ_P0089267 Atp2c2 protein_coding protein_coding MGP_WSBEiJ_T0086994.1 MGP_WSBEiJ_G0032588.1 mouse_genomes_project 8 20579003 20607881 - MGP_WSBEiJ_P0086994 Polb protein_coding protein_coding MGP_WSBEiJ_T0086802.1 MGP_WSBEiJ_G0032500.1 mouse_genomes_project 8 10335884 10345605 + MGP_WSBEiJ_P0086802 F7 protein_coding protein_coding MGP_WSBEiJ_T0088643.1 MGP_WSBEiJ_G0033088.1 mouse_genomes_project 8 95215506 95252542 + MGP_WSBEiJ_P0088643 Slc12a3 protein_coding protein_coding MGP_WSBEiJ_T0088727.1 MGP_WSBEiJ_G0033114.1 mouse_genomes_project 8 96275725 96297746 + MGP_WSBEiJ_P0088727 Mmp15 protein_coding protein_coding MGP_WSBEiJ_T0086577.1 MGP_WSBEiJ_G0032436.1 mouse_genomes_project 8 383774 401982 + MGP_WSBEiJ_P0086577 1700019B03Rik protein_coding protein_coding MGP_WSBEiJ_T0086578.1 MGP_WSBEiJ_G0032436.1 mouse_genomes_project 8 383774 401982 + MGP_WSBEiJ_P0086578 1700019B03Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086579.1 MGP_WSBEiJ_G0032436.1 mouse_genomes_project 8 390928 401985 + MGP_WSBEiJ_P0086579 1700019B03Rik protein_coding protein_coding MGP_WSBEiJ_T0087281.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39311611 39332213 - MGP_WSBEiJ_P0087281 Cnot7 protein_coding protein_coding MGP_WSBEiJ_T0087282.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39311613 39336309 - MGP_WSBEiJ_P0087282 Cnot7 protein_coding protein_coding MGP_WSBEiJ_T0087283.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39311614 39332177 - Cnot7 protein_coding retained_intron MGP_WSBEiJ_T0087284.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39311618 39332177 - MGP_WSBEiJ_P0087284 Cnot7 protein_coding protein_coding MGP_WSBEiJ_T0087285.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39312108 39331762 - MGP_WSBEiJ_P0087285 Cnot7 protein_coding protein_coding MGP_WSBEiJ_T0087286.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39313085 39321564 - Cnot7 protein_coding processed_transcript MGP_WSBEiJ_T0087287.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39315238 39328156 - Cnot7 protein_coding retained_intron MGP_WSBEiJ_T0087289.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39321224 39328073 - Cnot7 protein_coding processed_transcript MGP_WSBEiJ_T0087290.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39327805 39332181 - Cnot7 protein_coding processed_transcript MGP_WSBEiJ_T0087291.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39330486 39336297 - Cnot7 protein_coding processed_transcript MGP_WSBEiJ_T0087292.1 MGP_WSBEiJ_G0032684.1 mouse_genomes_project 8 39330566 39331762 - Cnot7 protein_coding processed_transcript MGP_WSBEiJ_T0087641.1 MGP_WSBEiJ_G0032787.1 mouse_genomes_project 8 67289347 67297049 + MGP_WSBEiJ_P0087641 Nat2 protein_coding protein_coding MGP_WSBEiJ_T0087642.1 MGP_WSBEiJ_G0032787.1 mouse_genomes_project 8 67289428 67297053 + MGP_WSBEiJ_P0087642 Nat2 protein_coding protein_coding MGP_WSBEiJ_T0015439.1 MGP_WSBEiJ_G0013569.1 mouse_genomes_project 8 10281651 10281855 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087906.1 MGP_WSBEiJ_G0032863.1 mouse_genomes_project 8 70805924 70808617 - MGP_WSBEiJ_P0087906 Rpl18a protein_coding protein_coding MGP_WSBEiJ_T0087509.1 MGP_WSBEiJ_G0032746.1 mouse_genomes_project 8 55236171 55277245 - MGP_WSBEiJ_P0087509 Adam29 protein_coding protein_coding MGP_WSBEiJ_T0089064.1 MGP_WSBEiJ_G0033250.1 mouse_genomes_project 8 112113314 112118864 + MGP_WSBEiJ_P0089064 Cmtr2 protein_coding protein_coding MGP_WSBEiJ_T0089065.1 MGP_WSBEiJ_G0033250.1 mouse_genomes_project 8 112115638 112122136 + MGP_WSBEiJ_P0089065 Cmtr2 protein_coding protein_coding MGP_WSBEiJ_T0015453.1 MGP_WSBEiJ_G0013583.1 mouse_genomes_project 8 29554619 29555085 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089166.1 MGP_WSBEiJ_G0033280.1 mouse_genomes_project 8 114060627 114086123 - MGP_WSBEiJ_P0089166 Kars protein_coding protein_coding MGP_WSBEiJ_T0089167.1 MGP_WSBEiJ_G0033280.1 mouse_genomes_project 8 114060631 114086161 - MGP_WSBEiJ_P0089167 Kars protein_coding protein_coding MGP_WSBEiJ_T0089168.1 MGP_WSBEiJ_G0033280.1 mouse_genomes_project 8 114060631 114086101 - MGP_WSBEiJ_P0089168 Kars protein_coding protein_coding MGP_WSBEiJ_T0087653.1 MGP_WSBEiJ_G0032790.1 mouse_genomes_project 8 68073086 68142874 + MGP_WSBEiJ_P0087653 Sh2d4a protein_coding protein_coding MGP_WSBEiJ_T0088717.1 MGP_WSBEiJ_G0033111.1 mouse_genomes_project 8 96233000 96235585 + MGP_WSBEiJ_P0088717 Tepp protein_coding protein_coding MGP_WSBEiJ_T0088718.1 MGP_WSBEiJ_G0033111.1 mouse_genomes_project 8 96233020 96242977 + MGP_WSBEiJ_P0088718 Tepp protein_coding protein_coding MGP_WSBEiJ_T0088719.1 MGP_WSBEiJ_G0033111.1 mouse_genomes_project 8 96234032 96243763 + MGP_WSBEiJ_P0088719 Tepp protein_coding protein_coding MGP_WSBEiJ_T0088720.1 MGP_WSBEiJ_G0033111.1 mouse_genomes_project 8 96234036 96243763 + MGP_WSBEiJ_P0088720 Tepp protein_coding protein_coding MGP_WSBEiJ_T0088721.1 MGP_WSBEiJ_G0033111.1 mouse_genomes_project 8 96242871 96248757 + Tepp protein_coding retained_intron MGP_WSBEiJ_T0088722.1 MGP_WSBEiJ_G0033111.1 mouse_genomes_project 8 96242929 96248645 + MGP_WSBEiJ_P0088722 Tepp protein_coding protein_coding MGP_WSBEiJ_T0088285.1 MGP_WSBEiJ_G0032987.1 mouse_genomes_project 8 84521074 84523990 - MGP_WSBEiJ_P0088285 Nanos3 protein_coding protein_coding MGP_WSBEiJ_T0005327.1 MGP_WSBEiJ_G0004513.1 mouse_genomes_project 8 127191584 127199197 - Gm15775 antisense antisense MGP_WSBEiJ_T0088987.1 MGP_WSBEiJ_G0033222.1 mouse_genomes_project 8 108795322 108799372 + MGP_WSBEiJ_P0088987 Nip7 protein_coding protein_coding MGP_WSBEiJ_T0088988.1 MGP_WSBEiJ_G0033222.1 mouse_genomes_project 8 108795322 108799372 + MGP_WSBEiJ_P0088988 Nip7 protein_coding protein_coding MGP_WSBEiJ_T0086687.1 MGP_WSBEiJ_G0032467.1 mouse_genomes_project 8 1260391 1296149 + MGP_WSBEiJ_P0086687 Ccl25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086688.1 MGP_WSBEiJ_G0032467.1 mouse_genomes_project 8 1260408 1284783 + MGP_WSBEiJ_P0086688 Ccl25 protein_coding non_stop_decay MGP_WSBEiJ_T0086689.1 MGP_WSBEiJ_G0032467.1 mouse_genomes_project 8 1260411 1284783 + MGP_WSBEiJ_P0086689 Ccl25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086690.1 MGP_WSBEiJ_G0032467.1 mouse_genomes_project 8 1260414 1295805 + MGP_WSBEiJ_P0086690 Ccl25 protein_coding protein_coding MGP_WSBEiJ_T0086691.1 MGP_WSBEiJ_G0032467.1 mouse_genomes_project 8 1260417 1290095 + MGP_WSBEiJ_P0086691 Ccl25 protein_coding protein_coding MGP_WSBEiJ_T0086692.1 MGP_WSBEiJ_G0032467.1 mouse_genomes_project 8 1260422 1268475 + Ccl25 protein_coding processed_transcript MGP_WSBEiJ_T0086693.1 MGP_WSBEiJ_G0032467.1 mouse_genomes_project 8 1285581 1294012 + MGP_WSBEiJ_P0086693 Ccl25 protein_coding protein_coding MGP_WSBEiJ_T0086694.1 MGP_WSBEiJ_G0032467.1 mouse_genomes_project 8 1285581 1296171 + MGP_WSBEiJ_P0086694 Ccl25 protein_coding protein_coding MGP_WSBEiJ_T0088104.1 MGP_WSBEiJ_G0032923.1 mouse_genomes_project 8 74999544 75036848 + MGP_WSBEiJ_P0088104 Tom1 protein_coding protein_coding MGP_WSBEiJ_T0088105.1 MGP_WSBEiJ_G0032923.1 mouse_genomes_project 8 74999544 75036848 + MGP_WSBEiJ_P0088105 Tom1 protein_coding protein_coding MGP_WSBEiJ_T0088966.1 MGP_WSBEiJ_G0033214.1 mouse_genomes_project 8 108376272 108561308 + MGP_WSBEiJ_P0088966 Tango6 protein_coding protein_coding MGP_WSBEiJ_T0087211.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32208089 32374668 - MGP_WSBEiJ_P0087211 Rbpms protein_coding protein_coding MGP_WSBEiJ_T0087212.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32208090 32374656 - MGP_WSBEiJ_P0087212 Rbpms protein_coding protein_coding MGP_WSBEiJ_T0087213.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32208093 32374621 - MGP_WSBEiJ_P0087213 Rbpms protein_coding protein_coding MGP_WSBEiJ_T0087214.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32209229 32374631 - MGP_WSBEiJ_P0087214 Rbpms protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087215.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32209500 32278632 - MGP_WSBEiJ_P0087215 Rbpms protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087216.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32209509 32232194 - MGP_WSBEiJ_P0087216 Rbpms protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087217.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32209512 32232157 - MGP_WSBEiJ_P0087217 Rbpms protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087218.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32209514 32287510 - Rbpms protein_coding processed_transcript MGP_WSBEiJ_T0087219.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32209520 32222671 - Rbpms protein_coding retained_intron MGP_WSBEiJ_T0087220.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32209629 32222340 - MGP_WSBEiJ_P0087220 Rbpms protein_coding unknown_likely_coding MGP_WSBEiJ_T0087221.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32229301 32374620 - MGP_WSBEiJ_P0087221 Rbpms protein_coding protein_coding MGP_WSBEiJ_T0087222.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32232099 32276920 - MGP_WSBEiJ_P0087222 Rbpms protein_coding protein_coding MGP_WSBEiJ_T0087223.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32232121 32331444 - MGP_WSBEiJ_P0087223 Rbpms protein_coding protein_coding MGP_WSBEiJ_T0087224.1 MGP_WSBEiJ_G0032660.1 mouse_genomes_project 8 32300903 32333446 - Rbpms protein_coding processed_transcript MGP_WSBEiJ_T0098566.1 MGP_WSBEiJ_G0037229.1 mouse_genomes_project 8 114147506 114147613 + Gm22827 snRNA snRNA MGP_WSBEiJ_T0086971.1 MGP_WSBEiJ_G0032576.1 mouse_genomes_project 8 19989322 20048835 - MGP_WSBEiJ_P0086971 Nek5 protein_coding protein_coding MGP_WSBEiJ_T0086972.1 MGP_WSBEiJ_G0032576.1 mouse_genomes_project 8 19989337 20048808 - MGP_WSBEiJ_P0086972 Nek5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086973.1 MGP_WSBEiJ_G0032576.1 mouse_genomes_project 8 19989337 20048809 - MGP_WSBEiJ_P0086973 Nek5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096850.1 MGP_WSBEiJ_G0035531.1 mouse_genomes_project 8 17632766 18192684 + pseudogene pseudogene MGP_WSBEiJ_T0089162.1 MGP_WSBEiJ_G0033278.1 mouse_genomes_project 8 114000929 114017184 + MGP_WSBEiJ_P0089162 Gabarapl2 protein_coding protein_coding MGP_WSBEiJ_T0089163.1 MGP_WSBEiJ_G0033278.1 mouse_genomes_project 8 114000984 114001977 + Gabarapl2 protein_coding retained_intron MGP_WSBEiJ_T0088165.1 MGP_WSBEiJ_G0032943.1 mouse_genomes_project 8 79834080 79865093 - MGP_WSBEiJ_P0088165 Abce1 protein_coding protein_coding MGP_WSBEiJ_T0005307.1 MGP_WSBEiJ_G0004495.1 mouse_genomes_project 8 111727056 111735281 - Gm17344 antisense antisense MGP_WSBEiJ_T0005308.1 MGP_WSBEiJ_G0004495.1 mouse_genomes_project 8 111728797 111735304 - Gm17344 antisense antisense MGP_WSBEiJ_T0087549.1 MGP_WSBEiJ_G0032761.1 mouse_genomes_project 8 60433497 60454056 + MGP_WSBEiJ_P0087549 Hpf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087550.1 MGP_WSBEiJ_G0032761.1 mouse_genomes_project 8 60433524 60454054 + MGP_WSBEiJ_P0087550 Hpf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087551.1 MGP_WSBEiJ_G0032761.1 mouse_genomes_project 8 60433530 60454061 + MGP_WSBEiJ_P0087551 Hpf1 protein_coding protein_coding MGP_WSBEiJ_T0087552.1 MGP_WSBEiJ_G0032761.1 mouse_genomes_project 8 60433530 60452453 + MGP_WSBEiJ_P0087552 Hpf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087553.1 MGP_WSBEiJ_G0032761.1 mouse_genomes_project 8 60433568 60440157 + Hpf1 protein_coding retained_intron MGP_WSBEiJ_T0088061.1 MGP_WSBEiJ_G0032907.1 mouse_genomes_project 8 72204189 72222812 + MGP_WSBEiJ_P0088061 Ap1m1 protein_coding protein_coding MGP_WSBEiJ_T0088062.1 MGP_WSBEiJ_G0032907.1 mouse_genomes_project 8 72204281 72215292 + MGP_WSBEiJ_P0088062 Ap1m1 protein_coding protein_coding MGP_WSBEiJ_T0088063.1 MGP_WSBEiJ_G0032907.1 mouse_genomes_project 8 72204494 72217408 + MGP_WSBEiJ_P0088063 Ap1m1 protein_coding protein_coding MGP_WSBEiJ_T0088064.1 MGP_WSBEiJ_G0032907.1 mouse_genomes_project 8 72218447 72222001 + Ap1m1 protein_coding retained_intron MGP_WSBEiJ_T0088065.1 MGP_WSBEiJ_G0032907.1 mouse_genomes_project 8 72218527 72222340 + Ap1m1 protein_coding retained_intron MGP_WSBEiJ_T0088379.1 MGP_WSBEiJ_G0033007.1 mouse_genomes_project 8 85310716 85314086 + MGP_WSBEiJ_P0088379 Klf1 protein_coding protein_coding MGP_WSBEiJ_T0087643.1 MGP_WSBEiJ_G0032788.1 mouse_genomes_project 8 67318225 67342975 + MGP_WSBEiJ_P0087643 Nat3 protein_coding protein_coding MGP_WSBEiJ_T0087126.1 MGP_WSBEiJ_G0032622.1 mouse_genomes_project 8 23937619 23960113 - MGP_WSBEiJ_P0087126 Ash2l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087127.1 MGP_WSBEiJ_G0032622.1 mouse_genomes_project 8 23937965 23960120 - MGP_WSBEiJ_P0087127 Ash2l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087128.1 MGP_WSBEiJ_G0032622.1 mouse_genomes_project 8 23938493 23960108 - MGP_WSBEiJ_P0087128 Ash2l protein_coding protein_coding MGP_WSBEiJ_T0087129.1 MGP_WSBEiJ_G0032622.1 mouse_genomes_project 8 23943836 23944844 - Ash2l protein_coding retained_intron MGP_WSBEiJ_T0087130.1 MGP_WSBEiJ_G0032622.1 mouse_genomes_project 8 23944412 23950637 - Ash2l protein_coding retained_intron MGP_WSBEiJ_T0087131.1 MGP_WSBEiJ_G0032622.1 mouse_genomes_project 8 23948276 23950093 - Ash2l protein_coding processed_transcript MGP_WSBEiJ_T0008979.1 MGP_WSBEiJ_G0007231.1 mouse_genomes_project 8 87383123 87383794 - Gm27168 lincRNA lincRNA MGP_WSBEiJ_T0089338.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123804724 123822801 - MGP_WSBEiJ_P0089338 Mthfsd protein_coding protein_coding MGP_WSBEiJ_T0089339.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123808119 123815765 - Mthfsd protein_coding processed_transcript MGP_WSBEiJ_T0089340.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123812124 123822810 - MGP_WSBEiJ_P0089340 Mthfsd protein_coding protein_coding MGP_WSBEiJ_T0089341.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123812126 123822778 - Mthfsd protein_coding processed_transcript MGP_WSBEiJ_T0089342.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123812128 123822793 - MGP_WSBEiJ_P0089342 Mthfsd protein_coding protein_coding MGP_WSBEiJ_T0089343.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123812338 123816173 - Mthfsd protein_coding retained_intron MGP_WSBEiJ_T0089344.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123812422 123822875 - MGP_WSBEiJ_P0089344 Mthfsd protein_coding protein_coding MGP_WSBEiJ_T0089345.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123812508 123822862 - Mthfsd protein_coding retained_intron MGP_WSBEiJ_T0089346.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123813279 123822771 - Mthfsd protein_coding processed_transcript MGP_WSBEiJ_T0089347.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123813579 123820117 - Mthfsd protein_coding processed_transcript MGP_WSBEiJ_T0089348.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123815755 123822781 - MGP_WSBEiJ_P0089348 Mthfsd protein_coding protein_coding MGP_WSBEiJ_T0089349.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123817302 123822126 - Mthfsd protein_coding retained_intron MGP_WSBEiJ_T0089350.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123818431 123820174 - Mthfsd protein_coding processed_transcript MGP_WSBEiJ_T0089351.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123818678 123822796 - Mthfsd protein_coding processed_transcript MGP_WSBEiJ_T0089352.1 MGP_WSBEiJ_G0033336.1 mouse_genomes_project 8 123819054 123822826 - Mthfsd protein_coding processed_transcript MGP_WSBEiJ_T0087336.1 MGP_WSBEiJ_G0032699.1 mouse_genomes_project 8 42600695 42602237 - MGP_WSBEiJ_P0087336 protein_coding protein_coding MGP_WSBEiJ_T0086939.1 MGP_WSBEiJ_G0032550.1 mouse_genomes_project 8 16716723 16719455 + MGP_WSBEiJ_P0086939 Defb6 protein_coding protein_coding MGP_WSBEiJ_T0097116.1 MGP_WSBEiJ_G0035797.1 mouse_genomes_project 8 76618964 76619092 - Gm27355 rRNA rRNA MGP_WSBEiJ_T0089511.1 MGP_WSBEiJ_G0033378.1 mouse_genomes_project 8 126084727 126100905 + MGP_WSBEiJ_P0089511 Zfp276 protein_coding protein_coding MGP_WSBEiJ_T0089512.1 MGP_WSBEiJ_G0033378.1 mouse_genomes_project 8 126084803 126088169 + Zfp276 protein_coding retained_intron MGP_WSBEiJ_T0089513.1 MGP_WSBEiJ_G0033378.1 mouse_genomes_project 8 126084816 126100903 + Zfp276 protein_coding retained_intron MGP_WSBEiJ_T0089514.1 MGP_WSBEiJ_G0033378.1 mouse_genomes_project 8 126085218 126096229 + MGP_WSBEiJ_P0089514 Zfp276 protein_coding protein_coding MGP_WSBEiJ_T0089515.1 MGP_WSBEiJ_G0033378.1 mouse_genomes_project 8 126088851 126099281 + Zfp276 protein_coding retained_intron MGP_WSBEiJ_T0089516.1 MGP_WSBEiJ_G0033378.1 mouse_genomes_project 8 126089983 126099076 + Zfp276 protein_coding retained_intron MGP_WSBEiJ_T0089517.1 MGP_WSBEiJ_G0033378.1 mouse_genomes_project 8 126095979 126096802 + Zfp276 protein_coding retained_intron MGP_WSBEiJ_T0089026.1 MGP_WSBEiJ_G0033233.1 mouse_genomes_project 8 111402423 111421075 - MGP_WSBEiJ_P0089026 Dhx38 protein_coding protein_coding MGP_WSBEiJ_T0008930.1 MGP_WSBEiJ_G0007189.1 mouse_genomes_project 8 24984656 24995040 - lincRNA lincRNA MGP_WSBEiJ_T0088500.1 MGP_WSBEiJ_G0033040.1 mouse_genomes_project 8 87954493 87959601 - MGP_WSBEiJ_P0088500 Cbln1 protein_coding protein_coding MGP_WSBEiJ_T0088501.1 MGP_WSBEiJ_G0033040.1 mouse_genomes_project 8 87954876 87959395 - MGP_WSBEiJ_P0088501 Cbln1 protein_coding protein_coding MGP_WSBEiJ_T0088465.1 MGP_WSBEiJ_G0033031.1 mouse_genomes_project 8 85907492 85945742 + MGP_WSBEiJ_P0088465 Gpt2 protein_coding protein_coding MGP_WSBEiJ_T0088466.1 MGP_WSBEiJ_G0033031.1 mouse_genomes_project 8 85907523 85943016 + MGP_WSBEiJ_P0088466 Gpt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088467.1 MGP_WSBEiJ_G0033031.1 mouse_genomes_project 8 85907525 85908224 + Gpt2 protein_coding processed_transcript MGP_WSBEiJ_T0088468.1 MGP_WSBEiJ_G0033031.1 mouse_genomes_project 8 85933336 85939676 + Gpt2 protein_coding retained_intron MGP_WSBEiJ_T0088469.1 MGP_WSBEiJ_G0033031.1 mouse_genomes_project 8 85936768 85943862 + Gpt2 protein_coding processed_transcript MGP_WSBEiJ_T0088708.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96159012 96229207 - MGP_WSBEiJ_P0088708 Cngb1 protein_coding protein_coding MGP_WSBEiJ_T0088709.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96160948 96201736 - MGP_WSBEiJ_P0088709 Cngb1 protein_coding protein_coding MGP_WSBEiJ_T0088710.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96160954 96201756 - MGP_WSBEiJ_P0088710 Cngb1 protein_coding protein_coding MGP_WSBEiJ_T0088711.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96213255 96226464 - Cngb1 protein_coding retained_intron MGP_WSBEiJ_T0088712.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96213255 96226464 - Cngb1 protein_coding retained_intron MGP_WSBEiJ_T0088713.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96213255 96216313 - Cngb1 protein_coding retained_intron MGP_WSBEiJ_T0088714.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96213255 96229207 - MGP_WSBEiJ_P0088714 Cngb1 protein_coding protein_coding MGP_WSBEiJ_T0088715.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96213255 96216726 - MGP_WSBEiJ_P0088715 Cngb1 protein_coding protein_coding MGP_WSBEiJ_T0088716.1 MGP_WSBEiJ_G0033110.1 mouse_genomes_project 8 96213258 96229192 - Cngb1 protein_coding retained_intron MGP_WSBEiJ_T0005315.1 MGP_WSBEiJ_G0004502.1 mouse_genomes_project 8 116935364 116944886 - Gm16118 antisense antisense MGP_WSBEiJ_T0087982.1 MGP_WSBEiJ_G0032885.1 mouse_genomes_project 8 71492814 71511618 + MGP_WSBEiJ_P0087982 Slc27a1 protein_coding protein_coding MGP_WSBEiJ_T0005247.1 MGP_WSBEiJ_G0004448.1 mouse_genomes_project 8 10129958 10135487 - Gm15350 antisense antisense MGP_WSBEiJ_T0005248.1 MGP_WSBEiJ_G0004448.1 mouse_genomes_project 8 10129958 10133543 - Gm15350 antisense antisense MGP_WSBEiJ_T0087492.1 MGP_WSBEiJ_G0032740.1 mouse_genomes_project 8 53454266 53563220 + MGP_WSBEiJ_P0087492 Vegfc protein_coding protein_coding MGP_WSBEiJ_T0010799.1 MGP_WSBEiJ_G0008956.1 mouse_genomes_project 8 84431770 84431858 + Mir709 miRNA miRNA MGP_WSBEiJ_T0089283.1 MGP_WSBEiJ_G0033324.1 mouse_genomes_project 8 122589829 122653561 + MGP_WSBEiJ_P0089283 Crispld2 protein_coding protein_coding MGP_WSBEiJ_T0089284.1 MGP_WSBEiJ_G0033324.1 mouse_genomes_project 8 122589899 122652347 + MGP_WSBEiJ_P0089284 Crispld2 protein_coding protein_coding MGP_WSBEiJ_T0089285.1 MGP_WSBEiJ_G0033324.1 mouse_genomes_project 8 122601178 122652347 + MGP_WSBEiJ_P0089285 Crispld2 protein_coding protein_coding MGP_WSBEiJ_T0089286.1 MGP_WSBEiJ_G0033324.1 mouse_genomes_project 8 122612165 122616523 + Crispld2 protein_coding processed_transcript MGP_WSBEiJ_T0089287.1 MGP_WSBEiJ_G0033324.1 mouse_genomes_project 8 122631630 122651242 + Crispld2 protein_coding retained_intron MGP_WSBEiJ_T0098542.1 MGP_WSBEiJ_G0037205.1 mouse_genomes_project 8 59100519 59100627 + Gm24847 snRNA snRNA MGP_WSBEiJ_T0089310.1 MGP_WSBEiJ_G0033329.1 mouse_genomes_project 8 123224023 123233846 - Gins2 protein_coding retained_intron MGP_WSBEiJ_T0089311.1 MGP_WSBEiJ_G0033329.1 mouse_genomes_project 8 123224023 123234170 - MGP_WSBEiJ_P0089311 Gins2 protein_coding protein_coding MGP_WSBEiJ_T0089312.1 MGP_WSBEiJ_G0033329.1 mouse_genomes_project 8 123226934 123231391 - Gins2 protein_coding retained_intron MGP_WSBEiJ_T0089313.1 MGP_WSBEiJ_G0033329.1 mouse_genomes_project 8 123227548 123233900 - Gins2 protein_coding processed_transcript MGP_WSBEiJ_T0010830.1 MGP_WSBEiJ_G0008987.1 mouse_genomes_project 8 113166603 113166685 + Gm23193 miRNA miRNA MGP_WSBEiJ_T0088544.1 MGP_WSBEiJ_G0033052.1 mouse_genomes_project 8 89625177 89642768 - MGP_WSBEiJ_P0088544 Sall1 protein_coding protein_coding MGP_WSBEiJ_T0017873.1 MGP_WSBEiJ_G0015137.1 mouse_genomes_project 8 76602358 76924485 - processed_transcript processed_transcript MGP_WSBEiJ_T0017874.1 MGP_WSBEiJ_G0015137.1 mouse_genomes_project 8 76756841 76924673 - processed_transcript processed_transcript MGP_WSBEiJ_T0017875.1 MGP_WSBEiJ_G0015137.1 mouse_genomes_project 8 76860696 76925121 - processed_transcript retained_intron MGP_WSBEiJ_T0089465.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125877772 125894899 + MGP_WSBEiJ_P0089465 Spg7 protein_coding protein_coding MGP_WSBEiJ_T0089466.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125880108 125916790 + MGP_WSBEiJ_P0089466 Spg7 protein_coding protein_coding MGP_WSBEiJ_T0089467.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125880356 125916588 + MGP_WSBEiJ_P0089467 Spg7 protein_coding protein_coding MGP_WSBEiJ_T0089468.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125880405 125916783 + MGP_WSBEiJ_P0089468 Spg7 protein_coding protein_coding MGP_WSBEiJ_T0089469.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125880437 125916781 + Spg7 protein_coding retained_intron MGP_WSBEiJ_T0089470.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125888713 125905781 + MGP_WSBEiJ_P0089470 Spg7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089471.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125895320 125905807 + Spg7 protein_coding retained_intron MGP_WSBEiJ_T0089472.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125895692 125916783 + MGP_WSBEiJ_P0089472 Spg7 protein_coding protein_coding MGP_WSBEiJ_T0089473.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125904047 125911353 + Spg7 protein_coding retained_intron MGP_WSBEiJ_T0089474.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125904217 125908548 + Spg7 protein_coding processed_transcript MGP_WSBEiJ_T0089475.1 MGP_WSBEiJ_G0033368.1 mouse_genomes_project 8 125908507 125916783 + MGP_WSBEiJ_P0089475 Spg7 protein_coding protein_coding MGP_WSBEiJ_T0087308.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39823772 39969969 - MGP_WSBEiJ_P0087308 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0087309.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39823776 39951009 - MGP_WSBEiJ_P0087309 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0087310.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39823776 39890056 - MGP_WSBEiJ_P0087310 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0087311.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39823910 39876395 - MGP_WSBEiJ_P0087311 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0087312.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39832825 39834266 - Mtus1 protein_coding retained_intron MGP_WSBEiJ_T0087313.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39834735 39850859 - Mtus1 protein_coding processed_transcript MGP_WSBEiJ_T0087314.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39834892 39850873 - MGP_WSBEiJ_P0087314 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0087315.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39836412 39850424 - MGP_WSBEiJ_P0087315 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0087316.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39848470 39874123 - Mtus1 protein_coding processed_transcript MGP_WSBEiJ_T0087317.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39853065 39890045 - Mtus1 protein_coding processed_transcript MGP_WSBEiJ_T0087318.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39853620 39856944 - Mtus1 protein_coding retained_intron MGP_WSBEiJ_T0087319.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39885295 39918626 - MGP_WSBEiJ_P0087319 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0087320.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39885410 39969969 - MGP_WSBEiJ_P0087320 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0087321.1 MGP_WSBEiJ_G0032690.1 mouse_genomes_project 8 39920415 39969961 - MGP_WSBEiJ_P0087321 Mtus1 protein_coding protein_coding MGP_WSBEiJ_T0089459.1 MGP_WSBEiJ_G0033365.1 mouse_genomes_project 8 125579039 125626262 + MGP_WSBEiJ_P0089459 Acsf3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099767.1 MGP_WSBEiJ_G0038430.1 mouse_genomes_project 8 15975642 15975773 - Gm24469 snoRNA snoRNA MGP_WSBEiJ_T0088141.1 MGP_WSBEiJ_G0032935.1 mouse_genomes_project 8 78594525 78599253 - MGP_WSBEiJ_P0088141 Rbmxl1 protein_coding protein_coding MGP_WSBEiJ_T0017847.1 MGP_WSBEiJ_G0015127.1 mouse_genomes_project 8 9970948 9972249 + 4931415C17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017848.1 MGP_WSBEiJ_G0015127.1 mouse_genomes_project 8 9971189 9977980 + 4931415C17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0087759.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70028412 70038193 + Tmem161a protein_coding processed_transcript MGP_WSBEiJ_T0087760.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70028461 70040930 + MGP_WSBEiJ_P0087760 Tmem161a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087761.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70028469 70040138 + MGP_WSBEiJ_P0087761 Tmem161a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087762.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70028472 70034323 + Tmem161a protein_coding retained_intron MGP_WSBEiJ_T0087763.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70028472 70034596 + Tmem161a protein_coding processed_transcript MGP_WSBEiJ_T0087764.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70028475 70038001 + MGP_WSBEiJ_P0087764 Tmem161a protein_coding protein_coding MGP_WSBEiJ_T0087765.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70028494 70040923 + MGP_WSBEiJ_P0087765 Tmem161a protein_coding protein_coding MGP_WSBEiJ_T0087766.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70030322 70040130 + MGP_WSBEiJ_P0087766 Tmem161a protein_coding protein_coding MGP_WSBEiJ_T0087767.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70034012 70034729 + Tmem161a protein_coding retained_intron MGP_WSBEiJ_T0087768.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70034407 70036132 + Tmem161a protein_coding processed_transcript MGP_WSBEiJ_T0087769.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70034657 70038475 + MGP_WSBEiJ_P0087769 Tmem161a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087770.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70035974 70038576 + Tmem161a protein_coding retained_intron MGP_WSBEiJ_T0087771.1 MGP_WSBEiJ_G0032823.1 mouse_genomes_project 8 70037801 70039295 + Tmem161a protein_coding retained_intron MGP_WSBEiJ_T0089080.1 MGP_WSBEiJ_G0033255.1 mouse_genomes_project 8 112752458 112788804 - MGP_WSBEiJ_P0089080 Sf3b3 protein_coding protein_coding MGP_WSBEiJ_T0088455.1 MGP_WSBEiJ_G0033026.1 mouse_genomes_project 8 85645999 85646938 + MGP_WSBEiJ_P0088455 Olfr371 protein_coding protein_coding MGP_WSBEiJ_T0017843.1 MGP_WSBEiJ_G0015125.1 mouse_genomes_project 8 1093371 1139265 - 4932443L11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017844.1 MGP_WSBEiJ_G0015125.1 mouse_genomes_project 8 1109088 1138670 - 4932443L11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0008922.1 MGP_WSBEiJ_G0007184.1 mouse_genomes_project 8 10006242 10017974 - Gm15348 lincRNA lincRNA MGP_WSBEiJ_T0087031.1 MGP_WSBEiJ_G0032594.1 mouse_genomes_project 8 21134234 21139918 + MGP_WSBEiJ_P0087031 Nkx6-3 protein_coding protein_coding MGP_WSBEiJ_T0089531.1 MGP_WSBEiJ_G0033382.1 mouse_genomes_project 8 126243205 126246818 + MGP_WSBEiJ_P0089531 Mc1r protein_coding protein_coding MGP_WSBEiJ_T0088282.1 MGP_WSBEiJ_G0032986.1 mouse_genomes_project 8 84492680 84508391 + MGP_WSBEiJ_P0088282 4930432K21Rik protein_coding protein_coding MGP_WSBEiJ_T0088283.1 MGP_WSBEiJ_G0032986.1 mouse_genomes_project 8 84492808 84519954 + MGP_WSBEiJ_P0088283 4930432K21Rik protein_coding protein_coding MGP_WSBEiJ_T0088284.1 MGP_WSBEiJ_G0032986.1 mouse_genomes_project 8 84492901 84519953 + MGP_WSBEiJ_P0088284 4930432K21Rik protein_coding protein_coding MGP_WSBEiJ_T0101127.1 MGP_WSBEiJ_G0039584.1 mouse_genomes_project 8 68421280 68421579 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0089257.1 MGP_WSBEiJ_G0033314.1 mouse_genomes_project 8 122140177 122164331 + MGP_WSBEiJ_P0089257 Dnaaf1 protein_coding protein_coding MGP_WSBEiJ_T0002289.1 MGP_WSBEiJ_G0002207.1 mouse_genomes_project 8 85845481 85846119 + TEC TEC MGP_WSBEiJ_T0002290.1 MGP_WSBEiJ_G0002207.1 mouse_genomes_project 8 85845481 85846111 + TEC TEC MGP_WSBEiJ_T0086950.1 MGP_WSBEiJ_G0032560.1 mouse_genomes_project 8 19275037 19276164 - MGP_WSBEiJ_P0086950 protein_coding protein_coding MGP_WSBEiJ_T0087846.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70383258 70399158 - MGP_WSBEiJ_P0087846 Kxd1 protein_coding protein_coding MGP_WSBEiJ_T0087849.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70383927 70404728 - MGP_WSBEiJ_P0087849 Kxd1 protein_coding protein_coding MGP_WSBEiJ_T0087850.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70389491 70399175 - MGP_WSBEiJ_P0087850 Kxd1 protein_coding protein_coding MGP_WSBEiJ_T0087851.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70389699 70399274 - MGP_WSBEiJ_P0087851 Kxd1 protein_coding protein_coding MGP_WSBEiJ_T0087852.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70390222 70399175 - MGP_WSBEiJ_P0087852 Kxd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087853.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70390785 70404728 - MGP_WSBEiJ_P0087853 Kxd1 protein_coding protein_coding MGP_WSBEiJ_T0087854.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70391493 70399085 - MGP_WSBEiJ_P0087854 Kxd1 protein_coding protein_coding MGP_WSBEiJ_T0087855.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70394412 70404555 - MGP_WSBEiJ_P0087855 Kxd1 protein_coding protein_coding MGP_WSBEiJ_T0087856.1 MGP_WSBEiJ_G0032839.1 mouse_genomes_project 8 70395059 70399099 - Kxd1 protein_coding retained_intron MGP_WSBEiJ_T0096858.1 MGP_WSBEiJ_G0035539.1 mouse_genomes_project 8 105245724 105259297 - pseudogene pseudogene MGP_WSBEiJ_T0089212.1 MGP_WSBEiJ_G0033296.1 mouse_genomes_project 8 119359414 119368666 - MGP_WSBEiJ_P0089212 1700030J22Rik protein_coding protein_coding MGP_WSBEiJ_T0088406.1 MGP_WSBEiJ_G0033012.1 mouse_genomes_project 8 85384933 85390119 + MGP_WSBEiJ_P0088406 Prdx2 protein_coding protein_coding MGP_WSBEiJ_T0088407.1 MGP_WSBEiJ_G0033012.1 mouse_genomes_project 8 85384957 85390119 + MGP_WSBEiJ_P0088407 Prdx2 protein_coding protein_coding MGP_WSBEiJ_T0088408.1 MGP_WSBEiJ_G0033012.1 mouse_genomes_project 8 85385040 85387459 + Prdx2 protein_coding retained_intron MGP_WSBEiJ_T0088409.1 MGP_WSBEiJ_G0033012.1 mouse_genomes_project 8 85385040 85386474 + Prdx2 protein_coding retained_intron MGP_WSBEiJ_T0088410.1 MGP_WSBEiJ_G0033012.1 mouse_genomes_project 8 85385113 85390119 + MGP_WSBEiJ_P0088410 Prdx2 protein_coding protein_coding MGP_WSBEiJ_T0088411.1 MGP_WSBEiJ_G0033012.1 mouse_genomes_project 8 85385203 85386977 + MGP_WSBEiJ_P0088411 Prdx2 protein_coding protein_coding MGP_WSBEiJ_T0088412.1 MGP_WSBEiJ_G0033012.1 mouse_genomes_project 8 85385585 85389944 + MGP_WSBEiJ_P0088412 Prdx2 protein_coding protein_coding MGP_WSBEiJ_T0088413.1 MGP_WSBEiJ_G0033012.1 mouse_genomes_project 8 85386804 85389600 + Prdx2 protein_coding retained_intron MGP_WSBEiJ_T0098562.1 MGP_WSBEiJ_G0037225.1 mouse_genomes_project 8 108743129 108743239 - Gm22085 snRNA snRNA MGP_WSBEiJ_T0087644.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67480887 67763061 - MGP_WSBEiJ_P0087644 Psd3 protein_coding protein_coding MGP_WSBEiJ_T0087645.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67480887 67763061 - MGP_WSBEiJ_P0087645 Psd3 protein_coding protein_coding MGP_WSBEiJ_T0087646.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67480894 67600437 - MGP_WSBEiJ_P0087646 Psd3 protein_coding protein_coding MGP_WSBEiJ_T0087647.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67487870 67763061 - MGP_WSBEiJ_P0087647 Psd3 protein_coding protein_coding MGP_WSBEiJ_T0087648.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67488704 67699215 - MGP_WSBEiJ_P0087648 Psd3 protein_coding protein_coding MGP_WSBEiJ_T0087649.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67503363 67600375 - MGP_WSBEiJ_P0087649 Psd3 protein_coding protein_coding MGP_WSBEiJ_T0087650.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67580134 67850092 - Psd3 protein_coding retained_intron MGP_WSBEiJ_T0087651.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67664219 67690890 - Psd3 protein_coding processed_transcript MGP_WSBEiJ_T0087652.1 MGP_WSBEiJ_G0032789.1 mouse_genomes_project 8 67690417 67740385 - Psd3 protein_coding retained_intron MGP_WSBEiJ_T0088395.1 MGP_WSBEiJ_G0033010.1 mouse_genomes_project 8 85357836 85369042 + MGP_WSBEiJ_P0088395 Rtbdn protein_coding protein_coding MGP_WSBEiJ_T0088396.1 MGP_WSBEiJ_G0033010.1 mouse_genomes_project 8 85357836 85369042 + MGP_WSBEiJ_P0088396 Rtbdn protein_coding protein_coding MGP_WSBEiJ_T0088397.1 MGP_WSBEiJ_G0033010.1 mouse_genomes_project 8 85362309 85369042 + MGP_WSBEiJ_P0088397 Rtbdn protein_coding protein_coding MGP_WSBEiJ_T0088398.1 MGP_WSBEiJ_G0033010.1 mouse_genomes_project 8 85363623 85368950 + MGP_WSBEiJ_P0088398 Rtbdn protein_coding protein_coding MGP_WSBEiJ_T0009021.1 MGP_WSBEiJ_G0007256.1 mouse_genomes_project 8 106743891 106751456 + Gm3830 lincRNA lincRNA MGP_WSBEiJ_T0088703.1 MGP_WSBEiJ_G0033106.1 mouse_genomes_project 8 95937229 95968337 + MGP_WSBEiJ_P0088703 Adgrg3 protein_coding protein_coding MGP_WSBEiJ_T0087654.1 MGP_WSBEiJ_G0032791.1 mouse_genomes_project 8 68151940 68527455 - MGP_WSBEiJ_P0087654 Csgalnact1 protein_coding protein_coding MGP_WSBEiJ_T0087655.1 MGP_WSBEiJ_G0032791.1 mouse_genomes_project 8 68153126 68527423 - MGP_WSBEiJ_P0087655 Csgalnact1 protein_coding protein_coding MGP_WSBEiJ_T0087656.1 MGP_WSBEiJ_G0032791.1 mouse_genomes_project 8 68183291 68527411 - MGP_WSBEiJ_P0087656 Csgalnact1 protein_coding protein_coding MGP_WSBEiJ_T0087657.1 MGP_WSBEiJ_G0032791.1 mouse_genomes_project 8 68259625 68527424 - Csgalnact1 protein_coding processed_transcript MGP_WSBEiJ_T0087658.1 MGP_WSBEiJ_G0032791.1 mouse_genomes_project 8 68360310 68527423 - Csgalnact1 protein_coding processed_transcript MGP_WSBEiJ_T0087659.1 MGP_WSBEiJ_G0032791.1 mouse_genomes_project 8 68360409 68527424 - Csgalnact1 protein_coding processed_transcript MGP_WSBEiJ_T0087660.1 MGP_WSBEiJ_G0032791.1 mouse_genomes_project 8 68447380 68527424 - Csgalnact1 protein_coding processed_transcript MGP_WSBEiJ_T0088014.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71640880 71653706 - MGP_WSBEiJ_P0088014 Fcho1 protein_coding protein_coding MGP_WSBEiJ_T0088015.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71640887 71658113 - MGP_WSBEiJ_P0088015 Fcho1 protein_coding protein_coding MGP_WSBEiJ_T0088016.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71640913 71658063 - Fcho1 protein_coding retained_intron MGP_WSBEiJ_T0088017.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71641146 71658063 - MGP_WSBEiJ_P0088017 Fcho1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088018.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71642129 71643599 - Fcho1 protein_coding retained_intron MGP_WSBEiJ_T0088019.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71642181 71644672 - Fcho1 protein_coding retained_intron MGP_WSBEiJ_T0088020.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71645032 71648034 - MGP_WSBEiJ_P0088020 Fcho1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088021.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71646840 71649100 - Fcho1 protein_coding retained_intron MGP_WSBEiJ_T0088022.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71648247 71658101 - MGP_WSBEiJ_P0088022 Fcho1 protein_coding protein_coding MGP_WSBEiJ_T0088023.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71648342 71654264 - Fcho1 protein_coding processed_transcript MGP_WSBEiJ_T0088024.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71649281 71658044 - Fcho1 protein_coding retained_intron MGP_WSBEiJ_T0088025.1 MGP_WSBEiJ_G0032893.1 mouse_genomes_project 8 71649679 71655746 - MGP_WSBEiJ_P0088025 Fcho1 protein_coding protein_coding MGP_WSBEiJ_T0099776.1 MGP_WSBEiJ_G0038439.1 mouse_genomes_project 8 37801010 37801142 - Gm23128 snoRNA snoRNA MGP_WSBEiJ_T0089446.1 MGP_WSBEiJ_G0033358.1 mouse_genomes_project 8 125357158 125362269 + MGP_WSBEiJ_P0089446 Cdt1 protein_coding protein_coding MGP_WSBEiJ_T0005257.1 MGP_WSBEiJ_G0004454.1 mouse_genomes_project 8 12366765 12367286 - Gm16350 antisense antisense MGP_WSBEiJ_T0088012.1 MGP_WSBEiJ_G0032891.1 mouse_genomes_project 8 71619472 71620835 + MGP_WSBEiJ_P0088012 Insl3 protein_coding protein_coding MGP_WSBEiJ_T0087135.1 MGP_WSBEiJ_G0032624.1 mouse_genomes_project 8 24063188 24096609 - MGP_WSBEiJ_P0087135 Hgsnat protein_coding protein_coding MGP_WSBEiJ_T0087602.1 MGP_WSBEiJ_G0032771.1 mouse_genomes_project 8 63708488 63918240 - MGP_WSBEiJ_P0087602 Tll1 protein_coding protein_coding MGP_WSBEiJ_T0010786.1 MGP_WSBEiJ_G0008943.1 mouse_genomes_project 8 69950676 69950739 - Mir7066 miRNA miRNA MGP_WSBEiJ_T0088112.1 MGP_WSBEiJ_G0032927.1 mouse_genomes_project 8 75440132 75959936 + MGP_WSBEiJ_P0088112 1700007B14Rik protein_coding protein_coding MGP_WSBEiJ_T0088113.1 MGP_WSBEiJ_G0032927.1 mouse_genomes_project 8 75440421 75959961 + MGP_WSBEiJ_P0088113 1700007B14Rik protein_coding protein_coding MGP_WSBEiJ_T0088450.1 MGP_WSBEiJ_G0033023.1 mouse_genomes_project 8 85503855 85507957 + MGP_WSBEiJ_P0088450 Wdr83os protein_coding protein_coding MGP_WSBEiJ_T0088451.1 MGP_WSBEiJ_G0033023.1 mouse_genomes_project 8 85504088 85507957 + Wdr83os protein_coding retained_intron MGP_WSBEiJ_T0088452.1 MGP_WSBEiJ_G0033023.1 mouse_genomes_project 8 85504126 85507603 + MGP_WSBEiJ_P0088452 Wdr83os protein_coding protein_coding MGP_WSBEiJ_T0087997.1 MGP_WSBEiJ_G0032888.1 mouse_genomes_project 8 71536593 71553451 + MGP_WSBEiJ_P0087997 Colgalt1 protein_coding protein_coding MGP_WSBEiJ_T0008958.1 MGP_WSBEiJ_G0007213.1 mouse_genomes_project 8 67888484 67912112 - lincRNA lincRNA MGP_WSBEiJ_T0008959.1 MGP_WSBEiJ_G0007213.1 mouse_genomes_project 8 67911149 67912326 - lincRNA lincRNA MGP_WSBEiJ_T0088798.1 MGP_WSBEiJ_G0033144.1 mouse_genomes_project 8 106159272 106162529 - MGP_WSBEiJ_P0088798 Rrad protein_coding protein_coding MGP_WSBEiJ_T0015434.1 MGP_WSBEiJ_G0013564.1 mouse_genomes_project 8 1762428 1762799 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087733.1 MGP_WSBEiJ_G0032812.1 mouse_genomes_project 8 69741650 69742985 + MGP_WSBEiJ_P0087733 Tssk6 protein_coding protein_coding MGP_WSBEiJ_T0086854.1 MGP_WSBEiJ_G0032518.1 mouse_genomes_project 8 11096129 11120291 + MGP_WSBEiJ_P0086854 Cdc16 protein_coding protein_coding MGP_WSBEiJ_T0086855.1 MGP_WSBEiJ_G0032518.1 mouse_genomes_project 8 11096130 11101469 + Cdc16 protein_coding processed_transcript MGP_WSBEiJ_T0086856.1 MGP_WSBEiJ_G0032518.1 mouse_genomes_project 8 11096168 11104943 + Cdc16 protein_coding processed_transcript MGP_WSBEiJ_T0086857.1 MGP_WSBEiJ_G0032518.1 mouse_genomes_project 8 11097220 11101472 + Cdc16 protein_coding retained_intron MGP_WSBEiJ_T0086858.1 MGP_WSBEiJ_G0032518.1 mouse_genomes_project 8 11117423 11120291 + Cdc16 protein_coding retained_intron MGP_WSBEiJ_T0086567.1 MGP_WSBEiJ_G0032433.1 mouse_genomes_project 8 248268 295703 + MGP_WSBEiJ_P0086567 A430078G23Rik protein_coding protein_coding MGP_WSBEiJ_T0097508.1 MGP_WSBEiJ_G0036172.1 mouse_genomes_project 8 9660818 9715272 + Gm5607 sense_overlapping sense_overlapping MGP_WSBEiJ_T0097509.1 MGP_WSBEiJ_G0036172.1 mouse_genomes_project 8 9660818 9715251 + Gm5607 sense_overlapping sense_overlapping MGP_WSBEiJ_T0087193.1 MGP_WSBEiJ_G0032653.1 mouse_genomes_project 8 31843572 31844413 + MGP_WSBEiJ_P0087193 5930422O12Rik protein_coding protein_coding MGP_WSBEiJ_T0089075.1 MGP_WSBEiJ_G0033254.1 mouse_genomes_project 8 112675574 112676444 - Il34 protein_coding processed_transcript MGP_WSBEiJ_T0089076.1 MGP_WSBEiJ_G0033254.1 mouse_genomes_project 8 112675585 112747870 - MGP_WSBEiJ_P0089076 Il34 protein_coding protein_coding MGP_WSBEiJ_T0089077.1 MGP_WSBEiJ_G0033254.1 mouse_genomes_project 8 112675585 112747839 - MGP_WSBEiJ_P0089077 Il34 protein_coding protein_coding MGP_WSBEiJ_T0089078.1 MGP_WSBEiJ_G0033254.1 mouse_genomes_project 8 112689687 112731121 - Il34 protein_coding processed_transcript MGP_WSBEiJ_T0089079.1 MGP_WSBEiJ_G0033254.1 mouse_genomes_project 8 112689976 112747891 - Il34 protein_coding processed_transcript MGP_WSBEiJ_T0088580.1 MGP_WSBEiJ_G0033064.1 mouse_genomes_project 8 93394569 93401158 + MGP_WSBEiJ_P0088580 Irx6 protein_coding protein_coding MGP_WSBEiJ_T0088581.1 MGP_WSBEiJ_G0033064.1 mouse_genomes_project 8 93395039 93401158 + MGP_WSBEiJ_P0088581 Irx6 protein_coding protein_coding MGP_WSBEiJ_T0088110.1 MGP_WSBEiJ_G0032926.1 mouse_genomes_project 8 75190400 75200623 + MGP_WSBEiJ_P0088110 Rasd2 protein_coding protein_coding MGP_WSBEiJ_T0088111.1 MGP_WSBEiJ_G0032926.1 mouse_genomes_project 8 75190958 75198935 + MGP_WSBEiJ_P0088111 Rasd2 protein_coding protein_coding MGP_WSBEiJ_T0086838.1 MGP_WSBEiJ_G0032512.1 mouse_genomes_project 8 10741481 10760209 + MGP_WSBEiJ_P0086838 Grk1 protein_coding protein_coding MGP_WSBEiJ_T0015472.1 MGP_WSBEiJ_G0013602.1 mouse_genomes_project 8 75254310 75255151 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0008955.1 MGP_WSBEiJ_G0007210.1 mouse_genomes_project 8 60539007 60541479 + B230317F23Rik lincRNA lincRNA MGP_WSBEiJ_T0098568.1 MGP_WSBEiJ_G0037231.1 mouse_genomes_project 8 117891002 117891106 - Gm23677 snRNA snRNA MGP_WSBEiJ_T0098530.1 MGP_WSBEiJ_G0037193.1 mouse_genomes_project 8 25644508 25644615 - Gm24410 snRNA snRNA MGP_WSBEiJ_T0088598.1 MGP_WSBEiJ_G0033073.1 mouse_genomes_project 8 93949533 93980908 - MGP_WSBEiJ_P0088598 Ces1e protein_coding protein_coding MGP_WSBEiJ_T0088599.1 MGP_WSBEiJ_G0033073.1 mouse_genomes_project 8 93949719 93980907 - MGP_WSBEiJ_P0088599 Ces1e protein_coding protein_coding MGP_WSBEiJ_T0088600.1 MGP_WSBEiJ_G0033073.1 mouse_genomes_project 8 93960653 93969826 - Ces1e protein_coding retained_intron MGP_WSBEiJ_T0005260.1 MGP_WSBEiJ_G0004457.1 mouse_genomes_project 8 13868234 13870963 + Gm16347 antisense antisense MGP_WSBEiJ_T0005261.1 MGP_WSBEiJ_G0004457.1 mouse_genomes_project 8 13868245 13872100 + Gm16347 antisense antisense MGP_WSBEiJ_T0088917.1 MGP_WSBEiJ_G0033195.1 mouse_genomes_project 8 107584223 107586092 - MGP_WSBEiJ_P0088917 Ctrl protein_coding protein_coding MGP_WSBEiJ_T0087620.1 MGP_WSBEiJ_G0032779.1 mouse_genomes_project 8 64821177 64823648 + MGP_WSBEiJ_P0087620 Gm10663 protein_coding protein_coding MGP_WSBEiJ_T0096863.1 MGP_WSBEiJ_G0035544.1 mouse_genomes_project 8 125382413 125382799 + pseudogene pseudogene MGP_WSBEiJ_T0086952.1 MGP_WSBEiJ_G0032562.1 mouse_genomes_project 8 19413183 19414158 - MGP_WSBEiJ_P0086952 AY761184 protein_coding protein_coding MGP_WSBEiJ_T0088916.1 MGP_WSBEiJ_G0033194.1 mouse_genomes_project 8 107550312 107584008 + MGP_WSBEiJ_P0088916 Pskh1 protein_coding protein_coding MGP_WSBEiJ_T0087571.1 MGP_WSBEiJ_G0032765.1 mouse_genomes_project 8 61067614 61083587 + MGP_WSBEiJ_P0087571 Cbr4 protein_coding protein_coding MGP_WSBEiJ_T0087572.1 MGP_WSBEiJ_G0032765.1 mouse_genomes_project 8 61067615 61071461 + MGP_WSBEiJ_P0087572 Cbr4 protein_coding protein_coding MGP_WSBEiJ_T0087573.1 MGP_WSBEiJ_G0032765.1 mouse_genomes_project 8 61067635 61071779 + Cbr4 protein_coding retained_intron MGP_WSBEiJ_T0087574.1 MGP_WSBEiJ_G0032765.1 mouse_genomes_project 8 61067649 61083434 + Cbr4 protein_coding retained_intron MGP_WSBEiJ_T0087575.1 MGP_WSBEiJ_G0032765.1 mouse_genomes_project 8 61071283 61083434 + Cbr4 protein_coding retained_intron MGP_WSBEiJ_T0087576.1 MGP_WSBEiJ_G0032765.1 mouse_genomes_project 8 61074675 61083494 + Cbr4 protein_coding retained_intron MGP_WSBEiJ_T0015499.1 MGP_WSBEiJ_G0013629.1 mouse_genomes_project 8 126859833 126860524 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087326.1 MGP_WSBEiJ_G0032693.1 mouse_genomes_project 8 40175719 40212785 - MGP_WSBEiJ_P0087326 Asah1 protein_coding protein_coding MGP_WSBEiJ_T0087327.1 MGP_WSBEiJ_G0032693.1 mouse_genomes_project 8 40176181 40186488 - Asah1 protein_coding retained_intron MGP_WSBEiJ_T0087328.1 MGP_WSBEiJ_G0032693.1 mouse_genomes_project 8 40176847 40179372 - Asah1 protein_coding retained_intron MGP_WSBEiJ_T0087329.1 MGP_WSBEiJ_G0032693.1 mouse_genomes_project 8 40182630 40212647 - MGP_WSBEiJ_P0087329 Asah1 protein_coding protein_coding MGP_WSBEiJ_T0087330.1 MGP_WSBEiJ_G0032693.1 mouse_genomes_project 8 40190460 40212785 - MGP_WSBEiJ_P0087330 Asah1 protein_coding protein_coding MGP_WSBEiJ_T0087727.1 MGP_WSBEiJ_G0032809.1 mouse_genomes_project 8 69719065 69726383 - MGP_WSBEiJ_P0087727 Cilp2 protein_coding protein_coding MGP_WSBEiJ_T0096853.1 MGP_WSBEiJ_G0035534.1 mouse_genomes_project 8 75380520 75381062 + pseudogene pseudogene MGP_WSBEiJ_T0005246.1 MGP_WSBEiJ_G0004447.1 mouse_genomes_project 8 9085168 9086591 - Gm15875 antisense antisense MGP_WSBEiJ_T0088156.1 MGP_WSBEiJ_G0032941.1 mouse_genomes_project 8 79465827 79528606 - MGP_WSBEiJ_P0088156 Smad1 protein_coding protein_coding MGP_WSBEiJ_T0088157.1 MGP_WSBEiJ_G0032941.1 mouse_genomes_project 8 79469018 79528606 - MGP_WSBEiJ_P0088157 Smad1 protein_coding protein_coding MGP_WSBEiJ_T0088158.1 MGP_WSBEiJ_G0032941.1 mouse_genomes_project 8 79483013 79528606 - MGP_WSBEiJ_P0088158 Smad1 protein_coding protein_coding MGP_WSBEiJ_T0087173.1 MGP_WSBEiJ_G0032643.1 mouse_genomes_project 8 29414910 29427877 + MGP_WSBEiJ_P0087173 Dusp26 protein_coding protein_coding MGP_WSBEiJ_T0087174.1 MGP_WSBEiJ_G0032643.1 mouse_genomes_project 8 29415075 29427876 + MGP_WSBEiJ_P0087174 Dusp26 protein_coding protein_coding MGP_WSBEiJ_T0087175.1 MGP_WSBEiJ_G0032643.1 mouse_genomes_project 8 29415241 29423053 + Dusp26 protein_coding retained_intron MGP_WSBEiJ_T0087176.1 MGP_WSBEiJ_G0032643.1 mouse_genomes_project 8 29422470 29427876 + MGP_WSBEiJ_P0087176 Dusp26 protein_coding protein_coding MGP_WSBEiJ_T0087177.1 MGP_WSBEiJ_G0032643.1 mouse_genomes_project 8 29424805 29427418 + Dusp26 protein_coding processed_transcript MGP_WSBEiJ_T0086608.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 564070 578133 + MGP_WSBEiJ_P0086608 Stxbp2 protein_coding protein_coding MGP_WSBEiJ_T0086609.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 564265 568604 + Stxbp2 protein_coding processed_transcript MGP_WSBEiJ_T0086610.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 564266 567038 + Stxbp2 protein_coding processed_transcript MGP_WSBEiJ_T0086611.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 564266 568749 + Stxbp2 protein_coding processed_transcript MGP_WSBEiJ_T0086612.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 564270 567849 + Stxbp2 protein_coding retained_intron MGP_WSBEiJ_T0086613.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 564278 568852 + Stxbp2 protein_coding retained_intron MGP_WSBEiJ_T0086614.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 564283 577287 + MGP_WSBEiJ_P0086614 Stxbp2 protein_coding protein_coding MGP_WSBEiJ_T0086615.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 566028 567180 + Stxbp2 protein_coding retained_intron MGP_WSBEiJ_T0086616.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 568525 568829 + Stxbp2 protein_coding retained_intron MGP_WSBEiJ_T0086617.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 570298 575462 + Stxbp2 protein_coding processed_transcript MGP_WSBEiJ_T0086618.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 574267 577286 + Stxbp2 protein_coding processed_transcript MGP_WSBEiJ_T0086619.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 575194 576395 + Stxbp2 protein_coding retained_intron MGP_WSBEiJ_T0086620.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 575221 576480 + Stxbp2 protein_coding retained_intron MGP_WSBEiJ_T0086621.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 575294 577280 + Stxbp2 protein_coding retained_intron MGP_WSBEiJ_T0086622.1 MGP_WSBEiJ_G0032445.1 mouse_genomes_project 8 576069 577287 + Stxbp2 protein_coding retained_intron MGP_WSBEiJ_T0087265.1 MGP_WSBEiJ_G0032678.1 mouse_genomes_project 8 36268158 37454062 - MGP_WSBEiJ_P0087265 Sgcz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087266.1 MGP_WSBEiJ_G0032678.1 mouse_genomes_project 8 36268414 37454062 - MGP_WSBEiJ_P0087266 Sgcz protein_coding protein_coding MGP_WSBEiJ_T0089541.1 MGP_WSBEiJ_G0033385.1 mouse_genomes_project 8 126306511 126337523 + MGP_WSBEiJ_P0089541 Afg3l1 protein_coding protein_coding MGP_WSBEiJ_T0089542.1 MGP_WSBEiJ_G0033385.1 mouse_genomes_project 8 126306511 126337523 + MGP_WSBEiJ_P0089542 Afg3l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089543.1 MGP_WSBEiJ_G0033385.1 mouse_genomes_project 8 126306548 126310731 + Afg3l1 protein_coding retained_intron MGP_WSBEiJ_T0089544.1 MGP_WSBEiJ_G0033385.1 mouse_genomes_project 8 126309803 126319360 + Afg3l1 protein_coding processed_transcript MGP_WSBEiJ_T0089545.1 MGP_WSBEiJ_G0033385.1 mouse_genomes_project 8 126326571 126332544 + Afg3l1 protein_coding retained_intron MGP_WSBEiJ_T0089546.1 MGP_WSBEiJ_G0033385.1 mouse_genomes_project 8 126334692 126335222 + Afg3l1 protein_coding retained_intron MGP_WSBEiJ_T0010771.1 MGP_WSBEiJ_G0008928.1 mouse_genomes_project 8 17132337 17132411 - Gm27852 miRNA miRNA MGP_WSBEiJ_T0008946.1 MGP_WSBEiJ_G0007201.1 mouse_genomes_project 8 34163063 34170357 - Gm16793 lincRNA lincRNA MGP_WSBEiJ_T0008950.1 MGP_WSBEiJ_G0007205.1 mouse_genomes_project 8 45793523 45802076 - lincRNA lincRNA MGP_WSBEiJ_T0089483.1 MGP_WSBEiJ_G0033371.1 mouse_genomes_project 8 125967359 125987219 - MGP_WSBEiJ_P0089483 Sult5a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089484.1 MGP_WSBEiJ_G0033371.1 mouse_genomes_project 8 125967366 125986479 - MGP_WSBEiJ_P0089484 Sult5a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089485.1 MGP_WSBEiJ_G0033371.1 mouse_genomes_project 8 125973303 125986466 - MGP_WSBEiJ_P0089485 Sult5a1 protein_coding protein_coding MGP_WSBEiJ_T0089486.1 MGP_WSBEiJ_G0033371.1 mouse_genomes_project 8 125975977 125986437 - MGP_WSBEiJ_P0089486 Sult5a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089487.1 MGP_WSBEiJ_G0033371.1 mouse_genomes_project 8 125985208 125986483 - Sult5a1 protein_coding retained_intron MGP_WSBEiJ_T0089488.1 MGP_WSBEiJ_G0033371.1 mouse_genomes_project 8 125985479 125986524 - Sult5a1 protein_coding retained_intron MGP_WSBEiJ_T0089110.1 MGP_WSBEiJ_G0033262.1 mouse_genomes_project 8 113022107 113047114 - MGP_WSBEiJ_P0089110 Clec18a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089111.1 MGP_WSBEiJ_G0033262.1 mouse_genomes_project 8 113022107 113047114 - MGP_WSBEiJ_P0089111 Clec18a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089112.1 MGP_WSBEiJ_G0033262.1 mouse_genomes_project 8 113022107 113047114 - MGP_WSBEiJ_P0089112 Clec18a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089113.1 MGP_WSBEiJ_G0033262.1 mouse_genomes_project 8 113033358 113046888 - MGP_WSBEiJ_P0089113 Clec18a protein_coding protein_coding MGP_WSBEiJ_T0089114.1 MGP_WSBEiJ_G0033262.1 mouse_genomes_project 8 113033358 113047114 - MGP_WSBEiJ_P0089114 Clec18a protein_coding protein_coding MGP_WSBEiJ_T0089115.1 MGP_WSBEiJ_G0033262.1 mouse_genomes_project 8 113033359 113047114 - MGP_WSBEiJ_P0089115 Clec18a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089116.1 MGP_WSBEiJ_G0033262.1 mouse_genomes_project 8 113033359 113057038 - MGP_WSBEiJ_P0089116 Clec18a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088976.1 MGP_WSBEiJ_G0033217.1 mouse_genomes_project 8 108607197 108643098 + MGP_WSBEiJ_P0088976 Cirh1a protein_coding protein_coding MGP_WSBEiJ_T0088046.1 MGP_WSBEiJ_G0032898.1 mouse_genomes_project 8 71952511 71974317 - MGP_WSBEiJ_P0088046 Cyp4f18 protein_coding protein_coding MGP_WSBEiJ_T0088047.1 MGP_WSBEiJ_G0032898.1 mouse_genomes_project 8 71952512 71956955 - Cyp4f18 protein_coding processed_transcript MGP_WSBEiJ_T0088048.1 MGP_WSBEiJ_G0032898.1 mouse_genomes_project 8 71953583 71957271 - Cyp4f18 protein_coding processed_transcript MGP_WSBEiJ_T0099797.1 MGP_WSBEiJ_G0038460.1 mouse_genomes_project 8 77175809 77175939 - Gm24838 snoRNA snoRNA MGP_WSBEiJ_T0017858.1 MGP_WSBEiJ_G0015134.1 mouse_genomes_project 8 48024299 48051104 + Gm19744 processed_transcript lincRNA MGP_WSBEiJ_T0017859.1 MGP_WSBEiJ_G0015134.1 mouse_genomes_project 8 48024356 48028123 + Gm19744 processed_transcript lincRNA MGP_WSBEiJ_T0017860.1 MGP_WSBEiJ_G0015134.1 mouse_genomes_project 8 48024435 48025748 + Gm19744 processed_transcript antisense MGP_WSBEiJ_T0017861.1 MGP_WSBEiJ_G0015134.1 mouse_genomes_project 8 48024679 48025153 + Gm19744 processed_transcript retained_intron MGP_WSBEiJ_T0017862.1 MGP_WSBEiJ_G0015134.1 mouse_genomes_project 8 48024741 48025247 + Gm19744 processed_transcript antisense MGP_WSBEiJ_T0017863.1 MGP_WSBEiJ_G0015134.1 mouse_genomes_project 8 48035811 48051989 + Gm19744 processed_transcript lincRNA MGP_WSBEiJ_T0005328.1 MGP_WSBEiJ_G0004514.1 mouse_genomes_project 8 128148680 128151600 - Gm16237 antisense antisense MGP_WSBEiJ_T0089269.1 MGP_WSBEiJ_G0033321.1 mouse_genomes_project 8 122400893 122432289 - MGP_WSBEiJ_P0089269 Cotl1 protein_coding protein_coding MGP_WSBEiJ_T0089270.1 MGP_WSBEiJ_G0033321.1 mouse_genomes_project 8 122400893 122432346 - MGP_WSBEiJ_P0089270 Cotl1 protein_coding protein_coding MGP_WSBEiJ_T0008956.1 MGP_WSBEiJ_G0007211.1 mouse_genomes_project 8 60849916 60857328 - 1700001D01Rik lincRNA lincRNA MGP_WSBEiJ_T0010783.1 MGP_WSBEiJ_G0008940.1 mouse_genomes_project 8 64232149 64232259 - Mir710 miRNA miRNA MGP_WSBEiJ_T0089478.1 MGP_WSBEiJ_G0033370.1 mouse_genomes_project 8 125937539 125958494 + Cpne7 protein_coding retained_intron MGP_WSBEiJ_T0089479.1 MGP_WSBEiJ_G0033370.1 mouse_genomes_project 8 125937543 125958496 + MGP_WSBEiJ_P0089479 Cpne7 protein_coding protein_coding MGP_WSBEiJ_T0089480.1 MGP_WSBEiJ_G0033370.1 mouse_genomes_project 8 125937612 125958496 + Cpne7 protein_coding retained_intron MGP_WSBEiJ_T0089481.1 MGP_WSBEiJ_G0033370.1 mouse_genomes_project 8 125949816 125950673 + Cpne7 protein_coding processed_transcript MGP_WSBEiJ_T0089482.1 MGP_WSBEiJ_G0033370.1 mouse_genomes_project 8 125951936 125955206 + Cpne7 protein_coding retained_intron MGP_WSBEiJ_T0087485.1 MGP_WSBEiJ_G0032738.1 mouse_genomes_project 8 52859804 52875083 + MGP_WSBEiJ_P0087485 Aga protein_coding protein_coding MGP_WSBEiJ_T0096856.1 MGP_WSBEiJ_G0035537.1 mouse_genomes_project 8 89783998 89784588 - pseudogene pseudogene MGP_WSBEiJ_T0088570.1 MGP_WSBEiJ_G0033061.1 mouse_genomes_project 8 91986414 92345197 + MGP_WSBEiJ_P0088570 Fto protein_coding protein_coding MGP_WSBEiJ_T0088571.1 MGP_WSBEiJ_G0033061.1 mouse_genomes_project 8 91986417 92114702 + Fto protein_coding retained_intron MGP_WSBEiJ_T0088572.1 MGP_WSBEiJ_G0033061.1 mouse_genomes_project 8 91986440 92198696 + Fto protein_coding retained_intron MGP_WSBEiJ_T0088573.1 MGP_WSBEiJ_G0033061.1 mouse_genomes_project 8 91986450 92158542 + Fto protein_coding retained_intron MGP_WSBEiJ_T0088574.1 MGP_WSBEiJ_G0033061.1 mouse_genomes_project 8 92061310 92083294 + MGP_WSBEiJ_P0088574 Fto protein_coding protein_coding MGP_WSBEiJ_T0088575.1 MGP_WSBEiJ_G0033061.1 mouse_genomes_project 8 92064125 92082918 + MGP_WSBEiJ_P0088575 Fto protein_coding protein_coding MGP_WSBEiJ_T0088576.1 MGP_WSBEiJ_G0033061.1 mouse_genomes_project 8 92138226 92343695 + Fto protein_coding processed_transcript MGP_WSBEiJ_T0089580.1 MGP_WSBEiJ_G0033401.1 mouse_genomes_project 8 127453439 127500169 + MGP_WSBEiJ_P0089580 Capn9 protein_coding protein_coding MGP_WSBEiJ_T0089581.1 MGP_WSBEiJ_G0033401.1 mouse_genomes_project 8 127453441 127471715 + MGP_WSBEiJ_P0089581 Capn9 protein_coding protein_coding MGP_WSBEiJ_T0089582.1 MGP_WSBEiJ_G0033401.1 mouse_genomes_project 8 127493618 127496054 + Capn9 protein_coding processed_transcript MGP_WSBEiJ_T0017864.1 MGP_WSBEiJ_G0015135.1 mouse_genomes_project 8 56714659 56730709 - AV026068 processed_transcript lincRNA MGP_WSBEiJ_T0017865.1 MGP_WSBEiJ_G0015135.1 mouse_genomes_project 8 56714659 56730788 - AV026068 processed_transcript retained_intron MGP_WSBEiJ_T0017866.1 MGP_WSBEiJ_G0015135.1 mouse_genomes_project 8 56714659 56731119 - AV026068 processed_transcript lincRNA MGP_WSBEiJ_T0017867.1 MGP_WSBEiJ_G0015135.1 mouse_genomes_project 8 56714659 56731245 - AV026068 processed_transcript lincRNA MGP_WSBEiJ_T0017868.1 MGP_WSBEiJ_G0015135.1 mouse_genomes_project 8 56714665 56715753 - AV026068 processed_transcript lincRNA MGP_WSBEiJ_T0017869.1 MGP_WSBEiJ_G0015135.1 mouse_genomes_project 8 56715637 56731216 - AV026068 processed_transcript retained_intron MGP_WSBEiJ_T0017870.1 MGP_WSBEiJ_G0015135.1 mouse_genomes_project 8 56717340 56731151 - AV026068 processed_transcript retained_intron MGP_WSBEiJ_T0017871.1 MGP_WSBEiJ_G0015135.1 mouse_genomes_project 8 56724661 56731132 - AV026068 processed_transcript retained_intron MGP_WSBEiJ_T0088422.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85480622 85488690 + MGP_WSBEiJ_P0088422 Fbxw9 protein_coding protein_coding MGP_WSBEiJ_T0088423.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85480623 85488692 + Fbxw9 protein_coding retained_intron MGP_WSBEiJ_T0088424.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85480664 85486375 + Fbxw9 protein_coding retained_intron MGP_WSBEiJ_T0088425.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85481096 85488685 + Fbxw9 protein_coding retained_intron MGP_WSBEiJ_T0088426.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85481134 85488455 + Fbxw9 protein_coding processed_transcript MGP_WSBEiJ_T0088427.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85486157 85487899 + Fbxw9 protein_coding retained_intron MGP_WSBEiJ_T0088428.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85487141 85487936 + Fbxw9 protein_coding processed_transcript MGP_WSBEiJ_T0088429.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85487195 85487938 + Fbxw9 protein_coding retained_intron MGP_WSBEiJ_T0088430.1 MGP_WSBEiJ_G0033019.1 mouse_genomes_project 8 85487636 85488472 + Fbxw9 protein_coding retained_intron MGP_WSBEiJ_T0005242.1 MGP_WSBEiJ_G0004443.1 mouse_genomes_project 8 155071 156009 + Gm16180 antisense antisense MGP_WSBEiJ_T0005250.1 MGP_WSBEiJ_G0004450.1 mouse_genomes_project 8 10182713 10187615 - Gm15353 antisense antisense MGP_WSBEiJ_T0005251.1 MGP_WSBEiJ_G0004450.1 mouse_genomes_project 8 10182857 10187605 - Gm15353 antisense antisense MGP_WSBEiJ_T0088311.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85078396 85084533 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088312.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85078408 85080908 + Trmt1 protein_coding processed_transcript MGP_WSBEiJ_T0088313.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85078428 85084919 + MGP_WSBEiJ_P0088313 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088314.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082457 85096721 + MGP_WSBEiJ_P0088314 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088315.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082838 85096700 + MGP_WSBEiJ_P0088315 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088316.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082848 85084336 + Trmt1 protein_coding processed_transcript MGP_WSBEiJ_T0088317.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082848 85084967 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088318.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082848 85092440 + MGP_WSBEiJ_P0088318 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088319.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082855 85096699 + MGP_WSBEiJ_P0088319 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088320.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082860 85093830 + MGP_WSBEiJ_P0088320 Trmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088321.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082863 85092211 + MGP_WSBEiJ_P0088321 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088322.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082874 85096721 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088323.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082874 85084825 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088324.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082875 85084408 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088325.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082876 85083570 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088326.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082877 85084405 + Trmt1 protein_coding processed_transcript MGP_WSBEiJ_T0088327.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082877 85092359 + MGP_WSBEiJ_P0088327 Trmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088328.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082877 85092383 + MGP_WSBEiJ_P0088328 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088329.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85082880 85087074 + Trmt1 protein_coding processed_transcript MGP_WSBEiJ_T0088330.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85083059 85096708 + MGP_WSBEiJ_P0088330 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088331.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85083072 85092149 + MGP_WSBEiJ_P0088331 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088332.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85083227 85092440 + Trmt1 protein_coding processed_transcript MGP_WSBEiJ_T0088333.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85083985 85094037 + Trmt1 protein_coding processed_transcript MGP_WSBEiJ_T0088334.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85091831 85094341 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088335.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85093748 85094426 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088336.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85093879 85095165 + MGP_WSBEiJ_P0088336 Trmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088337.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85094226 85094859 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088338.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85095301 85096699 + MGP_WSBEiJ_P0088338 Trmt1 protein_coding protein_coding MGP_WSBEiJ_T0088339.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85095983 85096699 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0088340.1 MGP_WSBEiJ_G0032995.1 mouse_genomes_project 8 85096093 85096564 + Trmt1 protein_coding retained_intron MGP_WSBEiJ_T0089675.1 MGP_WSBEiJ_G0033430.1 mouse_genomes_project 8 131864277 131919496 - MGP_WSBEiJ_P0089675 Gm3952 protein_coding protein_coding MGP_WSBEiJ_T0087137.1 MGP_WSBEiJ_G0032626.1 mouse_genomes_project 8 24122276 24142848 - MGP_WSBEiJ_P0087137 Fnta protein_coding protein_coding MGP_WSBEiJ_T0098539.1 MGP_WSBEiJ_G0037202.1 mouse_genomes_project 8 51379581 51379720 + Gm24929 snRNA snRNA MGP_WSBEiJ_T0089619.1 MGP_WSBEiJ_G0033415.1 mouse_genomes_project 8 128614249 128617791 + MGP_WSBEiJ_P0089619 Map10 protein_coding protein_coding MGP_WSBEiJ_T0088830.1 MGP_WSBEiJ_G0033158.1 mouse_genomes_project 8 106840403 106842919 - MGP_WSBEiJ_P0088830 B3gnt9 protein_coding protein_coding MGP_WSBEiJ_T0088831.1 MGP_WSBEiJ_G0033158.1 mouse_genomes_project 8 106840404 106842917 - MGP_WSBEiJ_P0088831 B3gnt9 protein_coding protein_coding MGP_WSBEiJ_T0088832.1 MGP_WSBEiJ_G0033158.1 mouse_genomes_project 8 106842087 106842917 - MGP_WSBEiJ_P0088832 B3gnt9 protein_coding protein_coding MGP_WSBEiJ_T0086628.1 MGP_WSBEiJ_G0032450.1 mouse_genomes_project 8 644132 654652 - MGP_WSBEiJ_P0086628 Clec4g protein_coding protein_coding MGP_WSBEiJ_T0086629.1 MGP_WSBEiJ_G0032450.1 mouse_genomes_project 8 653161 657751 - MGP_WSBEiJ_P0086629 Clec4g protein_coding protein_coding MGP_WSBEiJ_T0086630.1 MGP_WSBEiJ_G0032450.1 mouse_genomes_project 8 654312 655752 - Clec4g protein_coding retained_intron MGP_WSBEiJ_T0088999.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109051080 109092122 + Nfat5 protein_coding retained_intron MGP_WSBEiJ_T0089000.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109051080 109145083 + MGP_WSBEiJ_P0089000 Nfat5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089001.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109051080 109137990 + MGP_WSBEiJ_P0089001 Nfat5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089002.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109051119 109089964 + Nfat5 protein_coding retained_intron MGP_WSBEiJ_T0089003.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109051169 109137941 + MGP_WSBEiJ_P0089003 Nfat5 protein_coding protein_coding MGP_WSBEiJ_T0089004.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109051169 109145074 + MGP_WSBEiJ_P0089004 Nfat5 protein_coding protein_coding MGP_WSBEiJ_T0089005.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109051436 109139784 + MGP_WSBEiJ_P0089005 Nfat5 protein_coding protein_coding MGP_WSBEiJ_T0089006.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109100043 109139784 + MGP_WSBEiJ_P0089006 Nfat5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089007.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109101262 109133168 + Nfat5 protein_coding retained_intron MGP_WSBEiJ_T0089008.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109101262 109121196 + Nfat5 protein_coding retained_intron MGP_WSBEiJ_T0089009.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109101667 109136422 + MGP_WSBEiJ_P0089009 Nfat5 protein_coding protein_coding MGP_WSBEiJ_T0089010.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109108740 109127532 + MGP_WSBEiJ_P0089010 Nfat5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089011.1 MGP_WSBEiJ_G0033226.1 mouse_genomes_project 8 109121275 109139291 + MGP_WSBEiJ_P0089011 Nfat5 protein_coding protein_coding MGP_WSBEiJ_T0088242.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84231977 84273850 + MGP_WSBEiJ_P0088242 Adgrl1 protein_coding protein_coding MGP_WSBEiJ_T0088243.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84232606 84271909 + MGP_WSBEiJ_P0088243 Adgrl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088244.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84232741 84271909 + MGP_WSBEiJ_P0088244 Adgrl1 protein_coding protein_coding MGP_WSBEiJ_T0088245.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84232760 84271884 + MGP_WSBEiJ_P0088245 Adgrl1 protein_coding protein_coding MGP_WSBEiJ_T0088246.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84232760 84271884 + MGP_WSBEiJ_P0088246 Adgrl1 protein_coding protein_coding MGP_WSBEiJ_T0088247.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84254999 84261983 + Adgrl1 protein_coding processed_transcript MGP_WSBEiJ_T0088249.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84266508 84269392 + Adgrl1 protein_coding retained_intron MGP_WSBEiJ_T0088250.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84268050 84269725 + Adgrl1 protein_coding retained_intron MGP_WSBEiJ_T0088251.1 MGP_WSBEiJ_G0032970.1 mouse_genomes_project 8 84269551 84270762 + MGP_WSBEiJ_P0088251 Adgrl1 protein_coding protein_coding MGP_WSBEiJ_T0017881.1 MGP_WSBEiJ_G0015140.1 mouse_genomes_project 8 85472102 85481028 - A230103J11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017882.1 MGP_WSBEiJ_G0015140.1 mouse_genomes_project 8 85472131 85481011 - A230103J11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0089551.1 MGP_WSBEiJ_G0033388.1 mouse_genomes_project 8 126492944 126495001 + Rhou protein_coding retained_intron MGP_WSBEiJ_T0089552.1 MGP_WSBEiJ_G0033388.1 mouse_genomes_project 8 126492944 126502885 + MGP_WSBEiJ_P0089552 Rhou protein_coding protein_coding MGP_WSBEiJ_T0008963.1 MGP_WSBEiJ_G0007217.1 mouse_genomes_project 8 72109409 72112842 - Gm26586 lincRNA lincRNA MGP_WSBEiJ_T0009037.1 MGP_WSBEiJ_G0007269.1 mouse_genomes_project 8 123571821 123574099 + Gm26878 lincRNA lincRNA MGP_WSBEiJ_T0010818.1 MGP_WSBEiJ_G0008975.1 mouse_genomes_project 8 106236806 106236881 - Gm44328 miRNA miRNA MGP_WSBEiJ_T0089547.1 MGP_WSBEiJ_G0033386.1 mouse_genomes_project 8 126338324 126350866 - MGP_WSBEiJ_P0089547 Dbndd1 protein_coding protein_coding MGP_WSBEiJ_T0089548.1 MGP_WSBEiJ_G0033386.1 mouse_genomes_project 8 126339293 126350801 - MGP_WSBEiJ_P0089548 Dbndd1 protein_coding protein_coding MGP_WSBEiJ_T0089549.1 MGP_WSBEiJ_G0033386.1 mouse_genomes_project 8 126339293 126350874 - MGP_WSBEiJ_P0089549 Dbndd1 protein_coding protein_coding MGP_WSBEiJ_T0089081.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112789019 112825513 + MGP_WSBEiJ_P0089081 Cog4 protein_coding protein_coding MGP_WSBEiJ_T0089082.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112789024 112795723 + MGP_WSBEiJ_P0089082 Cog4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089083.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112789034 112794340 + MGP_WSBEiJ_P0089083 Cog4 protein_coding protein_coding MGP_WSBEiJ_T0089084.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112789039 112792268 + Cog4 protein_coding retained_intron MGP_WSBEiJ_T0089085.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112789051 112795787 + Cog4 protein_coding processed_transcript MGP_WSBEiJ_T0089086.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112789051 112795778 + MGP_WSBEiJ_P0089086 Cog4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089087.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112789051 112795824 + MGP_WSBEiJ_P0089087 Cog4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089088.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112789054 112825146 + MGP_WSBEiJ_P0089088 Cog4 protein_coding protein_coding MGP_WSBEiJ_T0089089.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112791865 112825502 + MGP_WSBEiJ_P0089089 Cog4 protein_coding protein_coding MGP_WSBEiJ_T0089090.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112802236 112811721 + Cog4 protein_coding retained_intron MGP_WSBEiJ_T0089091.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112802391 112825146 + MGP_WSBEiJ_P0089091 Cog4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089092.1 MGP_WSBEiJ_G0033256.1 mouse_genomes_project 8 112806398 112809953 + Cog4 protein_coding retained_intron MGP_WSBEiJ_T0089160.1 MGP_WSBEiJ_G0033276.1 mouse_genomes_project 8 113940992 113965980 - MGP_WSBEiJ_P0089160 Chst5 protein_coding protein_coding MGP_WSBEiJ_T0015469.1 MGP_WSBEiJ_G0013599.1 mouse_genomes_project 8 68599449 68600074 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088706.1 MGP_WSBEiJ_G0033109.1 mouse_genomes_project 8 96023256 96061845 - MGP_WSBEiJ_P0088706 Kifc3 protein_coding protein_coding MGP_WSBEiJ_T0088707.1 MGP_WSBEiJ_G0033109.1 mouse_genomes_project 8 96023262 96061770 - MGP_WSBEiJ_P0088707 Kifc3 protein_coding protein_coding MGP_WSBEiJ_T0088637.1 MGP_WSBEiJ_G0033083.1 mouse_genomes_project 8 95005863 95007690 + MGP_WSBEiJ_P0088637 Mt4 protein_coding protein_coding MGP_WSBEiJ_T0089494.1 MGP_WSBEiJ_G0033375.1 mouse_genomes_project 8 126049846 126058946 + MGP_WSBEiJ_P0089494 Cdk10 protein_coding protein_coding MGP_WSBEiJ_T0089495.1 MGP_WSBEiJ_G0033375.1 mouse_genomes_project 8 126051162 126055337 + MGP_WSBEiJ_P0089495 Cdk10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086574.1 MGP_WSBEiJ_G0032435.1 mouse_genomes_project 8 367035 379219 - MGP_WSBEiJ_P0086574 Pex11g protein_coding protein_coding MGP_WSBEiJ_T0086575.1 MGP_WSBEiJ_G0032435.1 mouse_genomes_project 8 367039 379184 - MGP_WSBEiJ_P0086575 Pex11g protein_coding protein_coding MGP_WSBEiJ_T0086576.1 MGP_WSBEiJ_G0032435.1 mouse_genomes_project 8 374766 379209 - MGP_WSBEiJ_P0086576 Pex11g protein_coding protein_coding MGP_WSBEiJ_T0005245.1 MGP_WSBEiJ_G0004446.1 mouse_genomes_project 8 8387494 8405375 + Gm15418 antisense antisense MGP_WSBEiJ_T0086956.1 MGP_WSBEiJ_G0032566.1 mouse_genomes_project 8 19690446 19696241 + MGP_WSBEiJ_P0086956 Defb2 protein_coding protein_coding MGP_WSBEiJ_T0087669.1 MGP_WSBEiJ_G0032793.1 mouse_genomes_project 8 68681881 68711046 + MGP_WSBEiJ_P0087669 Lpl protein_coding protein_coding MGP_WSBEiJ_T0087670.1 MGP_WSBEiJ_G0032793.1 mouse_genomes_project 8 68681945 68711559 + MGP_WSBEiJ_P0087670 Lpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087671.1 MGP_WSBEiJ_G0032793.1 mouse_genomes_project 8 68682047 68693303 + Lpl protein_coding retained_intron MGP_WSBEiJ_T0087672.1 MGP_WSBEiJ_G0032793.1 mouse_genomes_project 8 68694375 68699449 + Lpl protein_coding processed_transcript MGP_WSBEiJ_T0088166.1 MGP_WSBEiJ_G0032944.1 mouse_genomes_project 8 79865152 79927801 + MGP_WSBEiJ_P0088166 Anapc10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088879.1 MGP_WSBEiJ_G0033177.1 mouse_genomes_project 8 107127175 107173411 - MGP_WSBEiJ_P0088879 Atp6v0d1 protein_coding protein_coding MGP_WSBEiJ_T0088880.1 MGP_WSBEiJ_G0033177.1 mouse_genomes_project 8 107133357 107143145 - Atp6v0d1 protein_coding retained_intron MGP_WSBEiJ_T0005289.1 MGP_WSBEiJ_G0004480.1 mouse_genomes_project 8 68863343 68880377 + Gm15716 antisense antisense MGP_WSBEiJ_T0088895.1 MGP_WSBEiJ_G0033183.1 mouse_genomes_project 8 107321919 107324260 + MGP_WSBEiJ_P0088895 Pard6a protein_coding protein_coding MGP_WSBEiJ_T0088896.1 MGP_WSBEiJ_G0033183.1 mouse_genomes_project 8 107322412 107324259 + MGP_WSBEiJ_P0088896 Pard6a protein_coding protein_coding MGP_WSBEiJ_T0087121.1 MGP_WSBEiJ_G0032617.1 mouse_genomes_project 8 23839902 23871500 - MGP_WSBEiJ_P0087121 Ddhd2 protein_coding protein_coding MGP_WSBEiJ_T0088309.1 MGP_WSBEiJ_G0032993.1 mouse_genomes_project 8 85047969 85049489 - MGP_WSBEiJ_P0088309 Ier2 protein_coding protein_coding MGP_WSBEiJ_T0098546.1 MGP_WSBEiJ_G0037209.1 mouse_genomes_project 8 66998659 66998783 - Gm24274 snRNA snRNA MGP_WSBEiJ_T0088701.1 MGP_WSBEiJ_G0033105.1 mouse_genomes_project 8 95894557 95933520 + MGP_WSBEiJ_P0088701 Adgrg1 protein_coding protein_coding MGP_WSBEiJ_T0088702.1 MGP_WSBEiJ_G0033105.1 mouse_genomes_project 8 95902939 95933520 + MGP_WSBEiJ_P0088702 Adgrg1 protein_coding protein_coding MGP_WSBEiJ_T0098563.1 MGP_WSBEiJ_G0037226.1 mouse_genomes_project 8 111706639 111706741 - Gm25321 snRNA snRNA MGP_WSBEiJ_T0089609.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 127963474 128185568 + MGP_WSBEiJ_P0089609 Disc1 protein_coding protein_coding MGP_WSBEiJ_T0089610.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 127963474 128185568 + MGP_WSBEiJ_P0089610 Disc1 protein_coding protein_coding MGP_WSBEiJ_T0089611.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 127963474 128185568 + MGP_WSBEiJ_P0089611 Disc1 protein_coding protein_coding MGP_WSBEiJ_T0089612.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 127963474 128186274 + MGP_WSBEiJ_P0089612 Disc1 protein_coding protein_coding MGP_WSBEiJ_T0089613.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 127963474 128185568 + MGP_WSBEiJ_P0089613 Disc1 protein_coding protein_coding MGP_WSBEiJ_T0089614.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 127963474 128186274 + MGP_WSBEiJ_P0089614 Disc1 protein_coding protein_coding MGP_WSBEiJ_T0089615.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 127963488 128003076 + MGP_WSBEiJ_P0089615 Disc1 protein_coding protein_coding MGP_WSBEiJ_T0089616.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 127963509 128185565 + MGP_WSBEiJ_P0089616 Disc1 protein_coding protein_coding MGP_WSBEiJ_T0089617.1 MGP_WSBEiJ_G0033413.1 mouse_genomes_project 8 128000076 128016903 + Disc1 protein_coding processed_transcript MGP_WSBEiJ_T0086859.1 MGP_WSBEiJ_G0032519.1 mouse_genomes_project 8 11123967 11136858 + MGP_WSBEiJ_P0086859 Upf3a protein_coding protein_coding MGP_WSBEiJ_T0087917.1 MGP_WSBEiJ_G0032867.1 mouse_genomes_project 8 71159657 71268725 + MGP_WSBEiJ_P0087917 Myo9b protein_coding protein_coding MGP_WSBEiJ_T0087918.1 MGP_WSBEiJ_G0032867.1 mouse_genomes_project 8 71159657 71268725 + MGP_WSBEiJ_P0087918 Myo9b protein_coding protein_coding MGP_WSBEiJ_T0087919.1 MGP_WSBEiJ_G0032867.1 mouse_genomes_project 8 71159657 71268725 + MGP_WSBEiJ_P0087919 Myo9b protein_coding protein_coding MGP_WSBEiJ_T0087920.1 MGP_WSBEiJ_G0032867.1 mouse_genomes_project 8 71159687 71241196 + MGP_WSBEiJ_P0087920 Myo9b protein_coding unknown_likely_coding MGP_WSBEiJ_T0087921.1 MGP_WSBEiJ_G0032867.1 mouse_genomes_project 8 71249967 71267474 + MGP_WSBEiJ_P0087921 Myo9b protein_coding unknown_likely_coding MGP_WSBEiJ_T0086835.1 MGP_WSBEiJ_G0032510.1 mouse_genomes_project 8 10671063 10712629 + MGP_WSBEiJ_P0086835 Tfdp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086836.1 MGP_WSBEiJ_G0032510.1 mouse_genomes_project 8 10671933 10713027 + MGP_WSBEiJ_P0086836 Tfdp1 protein_coding protein_coding MGP_WSBEiJ_T0088524.1 MGP_WSBEiJ_G0033046.1 mouse_genomes_project 8 88807129 88871329 + MGP_WSBEiJ_P0088524 Adcy7 protein_coding protein_coding MGP_WSBEiJ_T0088525.1 MGP_WSBEiJ_G0033046.1 mouse_genomes_project 8 88824317 88871329 + MGP_WSBEiJ_P0088525 Adcy7 protein_coding protein_coding MGP_WSBEiJ_T0088526.1 MGP_WSBEiJ_G0033046.1 mouse_genomes_project 8 88830164 88871329 + MGP_WSBEiJ_P0088526 Adcy7 protein_coding protein_coding MGP_WSBEiJ_T0088527.1 MGP_WSBEiJ_G0033046.1 mouse_genomes_project 8 88835281 88871329 + MGP_WSBEiJ_P0088527 Adcy7 protein_coding protein_coding MGP_WSBEiJ_T0088775.1 MGP_WSBEiJ_G0033135.1 mouse_genomes_project 8 105816185 105827620 + MGP_WSBEiJ_P0088775 Cmtm2b protein_coding protein_coding MGP_WSBEiJ_T0008982.1 MGP_WSBEiJ_G0007234.1 mouse_genomes_project 8 87643793 87676828 - Gm10637 lincRNA lincRNA MGP_WSBEiJ_T0008983.1 MGP_WSBEiJ_G0007234.1 mouse_genomes_project 8 87672083 87676839 - Gm10637 lincRNA lincRNA MGP_WSBEiJ_T0015492.1 MGP_WSBEiJ_G0013622.1 mouse_genomes_project 8 98539983 98540973 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089191.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116659731 117636140 + MGP_WSBEiJ_P0089191 Wwox protein_coding protein_coding MGP_WSBEiJ_T0089192.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116659772 117123169 + MGP_WSBEiJ_P0089192 Wwox protein_coding protein_coding MGP_WSBEiJ_T0089193.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116659772 116956325 + MGP_WSBEiJ_P0089193 Wwox protein_coding protein_coding MGP_WSBEiJ_T0089194.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116659779 116673953 + Wwox protein_coding processed_transcript MGP_WSBEiJ_T0089195.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116659779 116696787 + MGP_WSBEiJ_P0089195 Wwox protein_coding protein_coding MGP_WSBEiJ_T0089196.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116668333 116739801 + Wwox protein_coding processed_transcript MGP_WSBEiJ_T0089197.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116839502 116943229 + Wwox protein_coding processed_transcript MGP_WSBEiJ_T0089198.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116949012 117635575 + Wwox protein_coding processed_transcript MGP_WSBEiJ_T0089199.1 MGP_WSBEiJ_G0033289.1 mouse_genomes_project 8 116949012 117282175 + Wwox protein_coding processed_transcript MGP_WSBEiJ_T0086713.1 MGP_WSBEiJ_G0032476.1 mouse_genomes_project 8 5785805 5810660 - MGP_WSBEiJ_P0086713 Arglu1 protein_coding protein_coding MGP_WSBEiJ_T0088839.1 MGP_WSBEiJ_G0033161.1 mouse_genomes_project 8 106858852 106864742 + MGP_WSBEiJ_P0088839 Hsf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088840.1 MGP_WSBEiJ_G0033161.1 mouse_genomes_project 8 106858880 106864899 + MGP_WSBEiJ_P0088840 Hsf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088841.1 MGP_WSBEiJ_G0033161.1 mouse_genomes_project 8 106858925 106864714 + MGP_WSBEiJ_P0088841 Hsf4 protein_coding protein_coding MGP_WSBEiJ_T0088842.1 MGP_WSBEiJ_G0033161.1 mouse_genomes_project 8 106858925 106864901 + MGP_WSBEiJ_P0088842 Hsf4 protein_coding protein_coding MGP_WSBEiJ_T0088843.1 MGP_WSBEiJ_G0033161.1 mouse_genomes_project 8 106858925 106864714 + MGP_WSBEiJ_P0088843 Hsf4 protein_coding protein_coding MGP_WSBEiJ_T0088583.1 MGP_WSBEiJ_G0033066.1 mouse_genomes_project 8 93579857 93644524 + MGP_WSBEiJ_P0088583 Lpcat2 protein_coding protein_coding MGP_WSBEiJ_T0088584.1 MGP_WSBEiJ_G0033066.1 mouse_genomes_project 8 93579987 93596016 + Lpcat2 protein_coding processed_transcript MGP_WSBEiJ_T0088586.1 MGP_WSBEiJ_G0033066.1 mouse_genomes_project 8 93631512 93643284 + Lpcat2 protein_coding processed_transcript MGP_WSBEiJ_T0087348.1 MGP_WSBEiJ_G0032704.1 mouse_genomes_project 8 44261943 44303313 - MGP_WSBEiJ_P0087348 Cyp4v3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087349.1 MGP_WSBEiJ_G0032704.1 mouse_genomes_project 8 44299781 44335631 - MGP_WSBEiJ_P0087349 Cyp4v3 protein_coding protein_coding MGP_WSBEiJ_T0087897.1 MGP_WSBEiJ_G0032856.1 mouse_genomes_project 8 70684202 70698477 - MGP_WSBEiJ_P0087897 Mast3 protein_coding protein_coding MGP_WSBEiJ_T0088608.1 MGP_WSBEiJ_G0033076.1 mouse_genomes_project 8 94105371 94117861 - MGP_WSBEiJ_P0088608 Ces1h protein_coding protein_coding MGP_WSBEiJ_T0088813.1 MGP_WSBEiJ_G0033153.1 mouse_genomes_project 8 106600922 106617413 + MGP_WSBEiJ_P0088813 protein_coding unknown_likely_coding MGP_WSBEiJ_T0015485.1 MGP_WSBEiJ_G0013615.1 mouse_genomes_project 8 83642629 83643105 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087225.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32542611 32547254 - Dctn6 protein_coding retained_intron MGP_WSBEiJ_T0087226.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32542619 32560487 - MGP_WSBEiJ_P0087226 Dctn6 protein_coding protein_coding MGP_WSBEiJ_T0087227.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32542754 32560582 - MGP_WSBEiJ_P0087227 Dctn6 protein_coding protein_coding MGP_WSBEiJ_T0087228.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32542769 32559860 - Dctn6 protein_coding processed_transcript MGP_WSBEiJ_T0087229.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32542798 32545152 - Dctn6 protein_coding retained_intron MGP_WSBEiJ_T0087230.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32542829 32559898 - MGP_WSBEiJ_P0087230 Dctn6 protein_coding protein_coding MGP_WSBEiJ_T0087231.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32544737 32551044 - Dctn6 protein_coding retained_intron MGP_WSBEiJ_T0087232.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32546913 32560523 - Dctn6 protein_coding retained_intron MGP_WSBEiJ_T0087233.1 MGP_WSBEiJ_G0032661.1 mouse_genomes_project 8 32547127 32560509 - MGP_WSBEiJ_P0087233 Dctn6 protein_coding protein_coding MGP_WSBEiJ_T0086986.1 MGP_WSBEiJ_G0032581.1 mouse_genomes_project 8 20222980 20314299 + MGP_WSBEiJ_P0086986 Tpte protein_coding protein_coding MGP_WSBEiJ_T0099800.1 MGP_WSBEiJ_G0038463.1 mouse_genomes_project 8 85469166 85469236 + Gm25506 snoRNA snoRNA MGP_WSBEiJ_T0088220.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 83980392 84012853 - MGP_WSBEiJ_P0088220 Pkn1 protein_coding protein_coding MGP_WSBEiJ_T0088221.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 83980721 84007741 - MGP_WSBEiJ_P0088221 Pkn1 protein_coding protein_coding MGP_WSBEiJ_T0088222.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 83980729 84012771 - MGP_WSBEiJ_P0088222 Pkn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088223.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 83980757 83986161 - Pkn1 protein_coding retained_intron MGP_WSBEiJ_T0088224.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 83981217 83982411 - Pkn1 protein_coding processed_transcript MGP_WSBEiJ_T0088225.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 83983657 83984224 - Pkn1 protein_coding retained_intron MGP_WSBEiJ_T0088226.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 83984110 83988401 - Pkn1 protein_coding processed_transcript MGP_WSBEiJ_T0088227.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 83988349 83992200 - Pkn1 protein_coding retained_intron MGP_WSBEiJ_T0088228.1 MGP_WSBEiJ_G0032967.1 mouse_genomes_project 8 84003596 84012841 - Pkn1 protein_coding retained_intron MGP_WSBEiJ_T0087101.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23711289 23790887 + MGP_WSBEiJ_P0087101 Whsc1l1 protein_coding protein_coding MGP_WSBEiJ_T0087102.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23711975 23788572 + Whsc1l1 protein_coding retained_intron MGP_WSBEiJ_T0087103.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23711975 23833373 + MGP_WSBEiJ_P0087103 Whsc1l1 protein_coding protein_coding MGP_WSBEiJ_T0087104.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23711975 23791644 + MGP_WSBEiJ_P0087104 Whsc1l1 protein_coding protein_coding MGP_WSBEiJ_T0087105.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23711975 23828685 + MGP_WSBEiJ_P0087105 Whsc1l1 protein_coding protein_coding MGP_WSBEiJ_T0087106.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23712010 23777233 + Whsc1l1 protein_coding retained_intron MGP_WSBEiJ_T0087107.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23751426 23833373 + MGP_WSBEiJ_P0087107 Whsc1l1 protein_coding protein_coding MGP_WSBEiJ_T0087108.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23788094 23791622 + Whsc1l1 protein_coding retained_intron MGP_WSBEiJ_T0087109.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23808504 23828685 + MGP_WSBEiJ_P0087109 Whsc1l1 protein_coding protein_coding MGP_WSBEiJ_T0087110.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23812871 23822392 + Whsc1l1 protein_coding retained_intron MGP_WSBEiJ_T0087111.1 MGP_WSBEiJ_G0032615.1 mouse_genomes_project 8 23814301 23815328 + Whsc1l1 protein_coding retained_intron MGP_WSBEiJ_T0089370.1 MGP_WSBEiJ_G0033343.1 mouse_genomes_project 8 124502228 124563385 + Jph3 protein_coding processed_transcript MGP_WSBEiJ_T0089371.1 MGP_WSBEiJ_G0033343.1 mouse_genomes_project 8 124504176 124564589 + MGP_WSBEiJ_P0089371 Jph3 protein_coding protein_coding MGP_WSBEiJ_T0089372.1 MGP_WSBEiJ_G0033343.1 mouse_genomes_project 8 124504180 124568043 + MGP_WSBEiJ_P0089372 Jph3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089373.1 MGP_WSBEiJ_G0033343.1 mouse_genomes_project 8 124527229 124556312 + Jph3 protein_coding retained_intron MGP_WSBEiJ_T0010815.1 MGP_WSBEiJ_G0008972.1 mouse_genomes_project 8 95405191 95405251 + Mir7072 miRNA miRNA MGP_WSBEiJ_T0086860.1 MGP_WSBEiJ_G0032520.1 mouse_genomes_project 8 11235353 11248628 + MGP_WSBEiJ_P0086860 Champ1 protein_coding protein_coding MGP_WSBEiJ_T0086861.1 MGP_WSBEiJ_G0032520.1 mouse_genomes_project 8 11235416 11246800 + MGP_WSBEiJ_P0086861 Champ1 protein_coding protein_coding MGP_WSBEiJ_T0011514.1 MGP_WSBEiJ_G0009671.1 mouse_genomes_project 8 23792622 23792944 + Gm23094 misc_RNA misc_RNA MGP_WSBEiJ_T0005320.1 MGP_WSBEiJ_G0004507.1 mouse_genomes_project 8 124581419 124582354 + Gm20406 antisense antisense MGP_WSBEiJ_T0088778.1 MGP_WSBEiJ_G0033138.1 mouse_genomes_project 8 105928440 105955427 - MGP_WSBEiJ_P0088778 Dync1li2 protein_coding protein_coding MGP_WSBEiJ_T0089639.1 MGP_WSBEiJ_G0033423.1 mouse_genomes_project 8 129406800 129463368 - MGP_WSBEiJ_P0089639 Tarbp1 protein_coding protein_coding MGP_WSBEiJ_T0087673.1 MGP_WSBEiJ_G0032794.1 mouse_genomes_project 8 68856145 68910689 - MGP_WSBEiJ_P0087673 Slc18a1 protein_coding protein_coding MGP_WSBEiJ_T0087674.1 MGP_WSBEiJ_G0032794.1 mouse_genomes_project 8 68882052 68897841 - Slc18a1 protein_coding retained_intron MGP_WSBEiJ_T0087675.1 MGP_WSBEiJ_G0032794.1 mouse_genomes_project 8 68888928 68896119 - Slc18a1 protein_coding retained_intron MGP_WSBEiJ_T0087676.1 MGP_WSBEiJ_G0032794.1 mouse_genomes_project 8 68895711 68910702 - Slc18a1 protein_coding processed_transcript MGP_WSBEiJ_T0087677.1 MGP_WSBEiJ_G0032794.1 mouse_genomes_project 8 68895779 68910676 - Slc18a1 protein_coding processed_transcript MGP_WSBEiJ_T0088977.1 MGP_WSBEiJ_G0033218.1 mouse_genomes_project 8 108656695 108747847 + MGP_WSBEiJ_P0088977 Sntb2 protein_coding protein_coding MGP_WSBEiJ_T0087386.1 MGP_WSBEiJ_G0032710.1 mouse_genomes_project 8 44975451 45000109 - MGP_WSBEiJ_P0087386 1700029J07Rik protein_coding protein_coding MGP_WSBEiJ_T0087387.1 MGP_WSBEiJ_G0032710.1 mouse_genomes_project 8 44975453 45000109 - MGP_WSBEiJ_P0087387 1700029J07Rik protein_coding protein_coding MGP_WSBEiJ_T0087521.1 MGP_WSBEiJ_G0032750.1 mouse_genomes_project 8 55951055 55995763 + MGP_WSBEiJ_P0087521 Fbxo8 protein_coding protein_coding MGP_WSBEiJ_T0087522.1 MGP_WSBEiJ_G0032750.1 mouse_genomes_project 8 55952007 55974689 + Fbxo8 protein_coding retained_intron MGP_WSBEiJ_T0011506.1 MGP_WSBEiJ_G0009663.1 mouse_genomes_project 8 547917 548244 + Gm22204 misc_RNA misc_RNA MGP_WSBEiJ_T0086638.1 MGP_WSBEiJ_G0032455.1 mouse_genomes_project 8 862294 867809 - MGP_WSBEiJ_P0086638 Cd209c protein_coding protein_coding MGP_WSBEiJ_T0086639.1 MGP_WSBEiJ_G0032455.1 mouse_genomes_project 8 862366 870500 - MGP_WSBEiJ_P0086639 Cd209c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086640.1 MGP_WSBEiJ_G0032455.1 mouse_genomes_project 8 865921 870405 - MGP_WSBEiJ_P0086640 Cd209c protein_coding unknown_likely_coding MGP_WSBEiJ_T0086913.1 MGP_WSBEiJ_G0032535.1 mouse_genomes_project 8 16063392 16278656 + MGP_WSBEiJ_P0086913 Mcph1 protein_coding protein_coding MGP_WSBEiJ_T0086914.1 MGP_WSBEiJ_G0032535.1 mouse_genomes_project 8 16063425 16185649 + MGP_WSBEiJ_P0086914 Mcph1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086915.1 MGP_WSBEiJ_G0032535.1 mouse_genomes_project 8 16063837 16162220 + Mcph1 protein_coding retained_intron MGP_WSBEiJ_T0086916.1 MGP_WSBEiJ_G0032535.1 mouse_genomes_project 8 16063843 16102984 + MGP_WSBEiJ_P0086916 Mcph1 protein_coding protein_coding MGP_WSBEiJ_T0086917.1 MGP_WSBEiJ_G0032535.1 mouse_genomes_project 8 16095645 16101963 + MGP_WSBEiJ_P0086917 Mcph1 protein_coding protein_coding MGP_WSBEiJ_T0087749.1 MGP_WSBEiJ_G0032820.1 mouse_genomes_project 8 69979347 69981759 + MGP_WSBEiJ_P0087749 Nr2c2ap protein_coding protein_coding MGP_WSBEiJ_T0088471.1 MGP_WSBEiJ_G0033033.1 mouse_genomes_project 8 86063474 86121721 - MGP_WSBEiJ_P0088471 Neto2 protein_coding protein_coding MGP_WSBEiJ_T0088472.1 MGP_WSBEiJ_G0033033.1 mouse_genomes_project 8 86063601 86131424 - MGP_WSBEiJ_P0088472 Neto2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086626.1 MGP_WSBEiJ_G0032448.1 mouse_genomes_project 8 611803 616756 + MGP_WSBEiJ_P0086626 Trappc5 protein_coding protein_coding MGP_WSBEiJ_T0087301.1 MGP_WSBEiJ_G0032688.1 mouse_genomes_project 8 39693298 39752409 + MGP_WSBEiJ_P0087301 Slc7a2 protein_coding protein_coding MGP_WSBEiJ_T0087302.1 MGP_WSBEiJ_G0032688.1 mouse_genomes_project 8 39693314 39757591 + MGP_WSBEiJ_P0087302 Slc7a2 protein_coding protein_coding MGP_WSBEiJ_T0087303.1 MGP_WSBEiJ_G0032688.1 mouse_genomes_project 8 39693480 39733036 + MGP_WSBEiJ_P0087303 Slc7a2 protein_coding protein_coding MGP_WSBEiJ_T0087304.1 MGP_WSBEiJ_G0032688.1 mouse_genomes_project 8 39707211 39757353 + MGP_WSBEiJ_P0087304 Slc7a2 protein_coding protein_coding MGP_WSBEiJ_T0087305.1 MGP_WSBEiJ_G0032688.1 mouse_genomes_project 8 39732489 39752079 + MGP_WSBEiJ_P0087305 Slc7a2 protein_coding protein_coding MGP_WSBEiJ_T0088582.1 MGP_WSBEiJ_G0033065.1 mouse_genomes_project 8 93551081 93577894 + MGP_WSBEiJ_P0088582 Mmp2 protein_coding protein_coding MGP_WSBEiJ_T0015445.1 MGP_WSBEiJ_G0013575.1 mouse_genomes_project 8 17111584 17112104 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010832.1 MGP_WSBEiJ_G0008989.1 mouse_genomes_project 8 113718635 113718709 - Mir7076 miRNA miRNA MGP_WSBEiJ_T0098557.1 MGP_WSBEiJ_G0037220.1 mouse_genomes_project 8 92726972 92727076 + Gm24254 snRNA snRNA MGP_WSBEiJ_T0086941.1 MGP_WSBEiJ_G0032552.1 mouse_genomes_project 8 16783115 16785047 + MGP_WSBEiJ_P0086941 Defb3 protein_coding protein_coding MGP_WSBEiJ_T0088299.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84752261 84892200 + Cacna1a protein_coding retained_intron MGP_WSBEiJ_T0088300.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84779900 85024401 + MGP_WSBEiJ_P0088300 Cacna1a protein_coding protein_coding MGP_WSBEiJ_T0088301.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84779913 85024217 + MGP_WSBEiJ_P0088301 Cacna1a protein_coding protein_coding MGP_WSBEiJ_T0088302.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84829741 85023863 + MGP_WSBEiJ_P0088302 Cacna1a protein_coding unknown_likely_coding MGP_WSBEiJ_T0088303.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84920136 84927077 + Cacna1a protein_coding processed_transcript MGP_WSBEiJ_T0088304.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84945256 84953881 + Cacna1a protein_coding retained_intron MGP_WSBEiJ_T0088305.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84974636 84987674 + Cacna1a protein_coding retained_intron MGP_WSBEiJ_T0088306.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84974649 84988636 + Cacna1a protein_coding retained_intron MGP_WSBEiJ_T0088307.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84974675 85014374 + Cacna1a protein_coding retained_intron MGP_WSBEiJ_T0088308.1 MGP_WSBEiJ_G0032992.1 mouse_genomes_project 8 84975178 84993446 + Cacna1a protein_coding processed_transcript MGP_WSBEiJ_T0009051.1 MGP_WSBEiJ_G0007279.1 mouse_genomes_project 8 124620892 124621719 - lincRNA lincRNA MGP_WSBEiJ_T0087904.1 MGP_WSBEiJ_G0032861.1 mouse_genomes_project 8 70777985 70783361 - MGP_WSBEiJ_P0087904 Ccdc124 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086627.1 MGP_WSBEiJ_G0032449.1 mouse_genomes_project 8 617236 630814 - MGP_WSBEiJ_P0086627 Fcer2a protein_coding protein_coding MGP_WSBEiJ_T0087829.1 MGP_WSBEiJ_G0032835.1 mouse_genomes_project 8 70356207 70359690 - MGP_WSBEiJ_P0087829 Tmem59l protein_coding protein_coding MGP_WSBEiJ_T0088352.1 MGP_WSBEiJ_G0033001.1 mouse_genomes_project 8 85234451 85238492 - MGP_WSBEiJ_P0088352 Rad23a protein_coding protein_coding MGP_WSBEiJ_T0088353.1 MGP_WSBEiJ_G0033001.1 mouse_genomes_project 8 85235084 85241087 - MGP_WSBEiJ_P0088353 Rad23a protein_coding protein_coding MGP_WSBEiJ_T0088354.1 MGP_WSBEiJ_G0033001.1 mouse_genomes_project 8 85235342 85241111 - MGP_WSBEiJ_P0088354 Rad23a protein_coding protein_coding MGP_WSBEiJ_T0088355.1 MGP_WSBEiJ_G0033001.1 mouse_genomes_project 8 85236064 85241111 - MGP_WSBEiJ_P0088355 Rad23a protein_coding protein_coding MGP_WSBEiJ_T0088356.1 MGP_WSBEiJ_G0033001.1 mouse_genomes_project 8 85238166 85239111 - Rad23a protein_coding retained_intron MGP_WSBEiJ_T0088357.1 MGP_WSBEiJ_G0033001.1 mouse_genomes_project 8 85238179 85239125 - Rad23a protein_coding retained_intron MGP_WSBEiJ_T0088358.1 MGP_WSBEiJ_G0033001.1 mouse_genomes_project 8 85238743 85241082 - Rad23a protein_coding retained_intron MGP_WSBEiJ_T0010778.1 MGP_WSBEiJ_G0008935.1 mouse_genomes_project 8 34369439 34369566 - Gm44474 miRNA miRNA MGP_WSBEiJ_T0087554.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60456892 60508652 - MGP_WSBEiJ_P0087554 Clcn3 protein_coding protein_coding MGP_WSBEiJ_T0087555.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60457369 60469459 - Clcn3 protein_coding processed_transcript MGP_WSBEiJ_T0087556.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60458402 60508779 - MGP_WSBEiJ_P0087556 Clcn3 protein_coding protein_coding MGP_WSBEiJ_T0087557.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60458429 60509264 - Clcn3 protein_coding retained_intron MGP_WSBEiJ_T0087558.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60458429 60538810 - MGP_WSBEiJ_P0087558 Clcn3 protein_coding protein_coding MGP_WSBEiJ_T0087559.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60458429 60538810 - MGP_WSBEiJ_P0087559 Clcn3 protein_coding protein_coding MGP_WSBEiJ_T0087560.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60474789 60508810 - Clcn3 protein_coding retained_intron MGP_WSBEiJ_T0087561.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60483079 60538815 - Clcn3 protein_coding retained_intron MGP_WSBEiJ_T0087562.1 MGP_WSBEiJ_G0032762.1 mouse_genomes_project 8 60486361 60538857 - Clcn3 protein_coding retained_intron MGP_WSBEiJ_T0005249.1 MGP_WSBEiJ_G0004449.1 mouse_genomes_project 8 10162938 10180177 - Gm15347 antisense antisense MGP_WSBEiJ_T0099821.1 MGP_WSBEiJ_G0038484.1 mouse_genomes_project 8 131882616 131882743 + Gm26100 snoRNA snoRNA MGP_WSBEiJ_T0005302.1 MGP_WSBEiJ_G0004491.1 mouse_genomes_project 8 107173687 107176037 + Gm38250 antisense antisense MGP_WSBEiJ_T0005303.1 MGP_WSBEiJ_G0004491.1 mouse_genomes_project 8 107173714 107188473 + Gm38250 antisense antisense MGP_WSBEiJ_T0011510.1 MGP_WSBEiJ_G0009667.1 mouse_genomes_project 8 4588921 4589120 + Gm27585 misc_RNA misc_RNA MGP_WSBEiJ_T0087816.1 MGP_WSBEiJ_G0032830.1 mouse_genomes_project 8 70181369 70197321 + MGP_WSBEiJ_P0087816 protein_coding protein_coding MGP_WSBEiJ_T0087817.1 MGP_WSBEiJ_G0032830.1 mouse_genomes_project 8 70181369 70197326 + MGP_WSBEiJ_P0087817 protein_coding protein_coding MGP_WSBEiJ_T0087818.1 MGP_WSBEiJ_G0032830.1 mouse_genomes_project 8 70183945 70188255 + protein_coding retained_intron MGP_WSBEiJ_T0088844.1 MGP_WSBEiJ_G0033162.1 mouse_genomes_project 8 106865502 106870989 + MGP_WSBEiJ_P0088844 Nol3 protein_coding protein_coding MGP_WSBEiJ_T0089059.1 MGP_WSBEiJ_G0033245.1 mouse_genomes_project 8 111904945 111916280 - MGP_WSBEiJ_P0089059 Chst4 protein_coding protein_coding MGP_WSBEiJ_T0086928.1 MGP_WSBEiJ_G0032540.1 mouse_genomes_project 8 16472818 16477632 - MGP_WSBEiJ_P0086928 Defb37 protein_coding protein_coding MGP_WSBEiJ_T0098532.1 MGP_WSBEiJ_G0037195.1 mouse_genomes_project 8 30551289 30551409 + Gm22140 snRNA snRNA MGP_WSBEiJ_T0015487.1 MGP_WSBEiJ_G0013617.1 mouse_genomes_project 8 85587864 85588089 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099796.1 MGP_WSBEiJ_G0038459.1 mouse_genomes_project 8 76000101 76000228 - Gm22544 snoRNA snoRNA MGP_WSBEiJ_T0097471.1 MGP_WSBEiJ_G0036140.1 mouse_genomes_project 8 123161625 123162697 + Gm26971 sense_intronic sense_intronic MGP_WSBEiJ_T0089553.1 MGP_WSBEiJ_G0033389.1 mouse_genomes_project 8 126655586 126688089 + MGP_WSBEiJ_P0089553 Rab4a protein_coding unknown_likely_coding MGP_WSBEiJ_T0008968.1 MGP_WSBEiJ_G0007221.1 mouse_genomes_project 8 79425028 79437614 + Gm4890 lincRNA lincRNA MGP_WSBEiJ_T0086625.1 MGP_WSBEiJ_G0032447.1 mouse_genomes_project 8 599175 603869 + MGP_WSBEiJ_P0086625 Mcemp1 protein_coding protein_coding MGP_WSBEiJ_T0015496.1 MGP_WSBEiJ_G0013626.1 mouse_genomes_project 8 113251039 113287059 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087124.1 MGP_WSBEiJ_G0032620.1 mouse_genomes_project 8 23903210 23922589 + MGP_WSBEiJ_P0087124 Lsm1 protein_coding protein_coding MGP_WSBEiJ_T0089355.1 MGP_WSBEiJ_G0033339.1 mouse_genomes_project 8 124274339 124288532 - MGP_WSBEiJ_P0089355 1700018B08Rik protein_coding protein_coding MGP_WSBEiJ_T0089356.1 MGP_WSBEiJ_G0033339.1 mouse_genomes_project 8 124274387 124288447 - MGP_WSBEiJ_P0089356 1700018B08Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089357.1 MGP_WSBEiJ_G0033339.1 mouse_genomes_project 8 124274387 124288447 - MGP_WSBEiJ_P0089357 1700018B08Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089358.1 MGP_WSBEiJ_G0033339.1 mouse_genomes_project 8 124275373 124290898 - MGP_WSBEiJ_P0089358 1700018B08Rik protein_coding protein_coding MGP_WSBEiJ_T0017849.1 MGP_WSBEiJ_G0015128.1 mouse_genomes_project 8 16123513 16149498 - Gm16725 processed_transcript processed_transcript MGP_WSBEiJ_T0097105.1 MGP_WSBEiJ_G0035786.1 mouse_genomes_project 8 2018405 2018524 - n-R5s93 rRNA rRNA MGP_WSBEiJ_T0088824.1 MGP_WSBEiJ_G0033157.1 mouse_genomes_project 8 106810563 106840819 + MGP_WSBEiJ_P0088824 D230025D16Rik protein_coding protein_coding MGP_WSBEiJ_T0088825.1 MGP_WSBEiJ_G0033157.1 mouse_genomes_project 8 106810624 106838891 + D230025D16Rik protein_coding retained_intron MGP_WSBEiJ_T0088826.1 MGP_WSBEiJ_G0033157.1 mouse_genomes_project 8 106810624 106840522 + MGP_WSBEiJ_P0088826 D230025D16Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088827.1 MGP_WSBEiJ_G0033157.1 mouse_genomes_project 8 106810685 106840819 + MGP_WSBEiJ_P0088827 D230025D16Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088828.1 MGP_WSBEiJ_G0033157.1 mouse_genomes_project 8 106816410 106826665 + MGP_WSBEiJ_P0088828 D230025D16Rik protein_coding protein_coding MGP_WSBEiJ_T0088829.1 MGP_WSBEiJ_G0033157.1 mouse_genomes_project 8 106834258 106839531 + D230025D16Rik protein_coding retained_intron MGP_WSBEiJ_T0088550.1 MGP_WSBEiJ_G0033056.1 mouse_genomes_project 8 91483343 91714257 + MGP_WSBEiJ_P0088550 Chd9 protein_coding protein_coding MGP_WSBEiJ_T0088552.1 MGP_WSBEiJ_G0033056.1 mouse_genomes_project 8 91560698 91711721 + MGP_WSBEiJ_P0088552 Chd9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0086600.1 MGP_WSBEiJ_G0032443.1 mouse_genomes_project 8 554748 557396 + MGP_WSBEiJ_P0086600 Pet100 protein_coding protein_coding MGP_WSBEiJ_T0005255.1 MGP_WSBEiJ_G0004452.1 mouse_genomes_project 8 10385415 10392090 + Gm17023 antisense antisense MGP_WSBEiJ_T0015436.1 MGP_WSBEiJ_G0013566.1 mouse_genomes_project 8 2066035 2066992 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088806.1 MGP_WSBEiJ_G0033148.1 mouse_genomes_project 8 106386874 106387949 + Ces2c protein_coding processed_transcript MGP_WSBEiJ_T0088807.1 MGP_WSBEiJ_G0033148.1 mouse_genomes_project 8 106386882 106395970 + MGP_WSBEiJ_P0088807 Ces2c protein_coding unknown_likely_coding MGP_WSBEiJ_T0089635.1 MGP_WSBEiJ_G0033419.1 mouse_genomes_project 8 128950280 128988540 + MGP_WSBEiJ_P0089635 Kcnk1 protein_coding protein_coding MGP_WSBEiJ_T0015500.1 MGP_WSBEiJ_G0013630.1 mouse_genomes_project 8 130621480 130621915 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087543.1 MGP_WSBEiJ_G0032759.1 mouse_genomes_project 8 60075146 60113953 + MGP_WSBEiJ_P0087543 Aadat protein_coding protein_coding MGP_WSBEiJ_T0087544.1 MGP_WSBEiJ_G0032759.1 mouse_genomes_project 8 60075235 60113540 + MGP_WSBEiJ_P0087544 Aadat protein_coding unknown_likely_coding MGP_WSBEiJ_T0005265.1 MGP_WSBEiJ_G0004460.1 mouse_genomes_project 8 21119970 21130563 - Gm15816 antisense antisense MGP_WSBEiJ_T0015468.1 MGP_WSBEiJ_G0013598.1 mouse_genomes_project 8 66628129 66628907 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011522.1 MGP_WSBEiJ_G0009679.1 mouse_genomes_project 8 84069009 84069295 + Gm22024 misc_RNA misc_RNA MGP_WSBEiJ_T0009034.1 MGP_WSBEiJ_G0007266.1 mouse_genomes_project 8 123234396 123239321 + Gm10614 lincRNA lincRNA MGP_WSBEiJ_T0087545.1 MGP_WSBEiJ_G0032760.1 mouse_genomes_project 8 60180120 60227133 + MGP_WSBEiJ_P0087545 Mfap3l protein_coding protein_coding MGP_WSBEiJ_T0087546.1 MGP_WSBEiJ_G0032760.1 mouse_genomes_project 8 60180153 60228929 + MGP_WSBEiJ_P0087546 Mfap3l protein_coding protein_coding MGP_WSBEiJ_T0087547.1 MGP_WSBEiJ_G0032760.1 mouse_genomes_project 8 60202279 60224668 + MGP_WSBEiJ_P0087547 Mfap3l protein_coding protein_coding MGP_WSBEiJ_T0087548.1 MGP_WSBEiJ_G0032760.1 mouse_genomes_project 8 60202715 60224564 + MGP_WSBEiJ_P0087548 Mfap3l protein_coding protein_coding MGP_WSBEiJ_T0087512.1 MGP_WSBEiJ_G0032748.1 mouse_genomes_project 8 55678010 55705299 + MGP_WSBEiJ_P0087512 Hpgd protein_coding protein_coding MGP_WSBEiJ_T0088799.1 MGP_WSBEiJ_G0033145.1 mouse_genomes_project 8 106173681 106175808 - MGP_WSBEiJ_P0088799 Fam96b protein_coding protein_coding MGP_WSBEiJ_T0088800.1 MGP_WSBEiJ_G0033145.1 mouse_genomes_project 8 106173683 106175542 - Fam96b protein_coding retained_intron MGP_WSBEiJ_T0088801.1 MGP_WSBEiJ_G0033145.1 mouse_genomes_project 8 106173690 106175544 - MGP_WSBEiJ_P0088801 Fam96b protein_coding protein_coding MGP_WSBEiJ_T0008970.1 MGP_WSBEiJ_G0007223.1 mouse_genomes_project 8 81214844 81243170 + lincRNA lincRNA MGP_WSBEiJ_T0087449.1 MGP_WSBEiJ_G0032726.1 mouse_genomes_project 8 46577193 46620458 - MGP_WSBEiJ_P0087449 Trappc11 protein_coding protein_coding MGP_WSBEiJ_T0087450.1 MGP_WSBEiJ_G0032726.1 mouse_genomes_project 8 46577206 46612008 - Trappc11 protein_coding retained_intron MGP_WSBEiJ_T0087451.1 MGP_WSBEiJ_G0032726.1 mouse_genomes_project 8 46577207 46620461 - Trappc11 protein_coding retained_intron MGP_WSBEiJ_T0087452.1 MGP_WSBEiJ_G0032726.1 mouse_genomes_project 8 46591267 46598402 - MGP_WSBEiJ_P0087452 Trappc11 protein_coding protein_coding MGP_WSBEiJ_T0087453.1 MGP_WSBEiJ_G0032726.1 mouse_genomes_project 8 46611647 46615021 - Trappc11 protein_coding retained_intron MGP_WSBEiJ_T0088499.1 MGP_WSBEiJ_G0033039.1 mouse_genomes_project 8 87298393 87344993 - MGP_WSBEiJ_P0088499 N4bp1 protein_coding protein_coding MGP_WSBEiJ_T0015444.1 MGP_WSBEiJ_G0013574.1 mouse_genomes_project 8 16764027 16764865 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0088734.1 MGP_WSBEiJ_G0033120.1 mouse_genomes_project 8 96604213 96642100 + MGP_WSBEiJ_P0088734 Ndrg4 protein_coding protein_coding MGP_WSBEiJ_T0088735.1 MGP_WSBEiJ_G0033120.1 mouse_genomes_project 8 96605475 96649099 + MGP_WSBEiJ_P0088735 Ndrg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088736.1 MGP_WSBEiJ_G0033120.1 mouse_genomes_project 8 96605577 96649112 + MGP_WSBEiJ_P0088736 Ndrg4 protein_coding protein_coding MGP_WSBEiJ_T0088737.1 MGP_WSBEiJ_G0033120.1 mouse_genomes_project 8 96639509 96645283 + Ndrg4 protein_coding processed_transcript MGP_WSBEiJ_T0088738.1 MGP_WSBEiJ_G0033120.1 mouse_genomes_project 8 96642065 96645781 + Ndrg4 protein_coding retained_intron MGP_WSBEiJ_T0088739.1 MGP_WSBEiJ_G0033120.1 mouse_genomes_project 8 96642862 96648067 + Ndrg4 protein_coding processed_transcript MGP_WSBEiJ_T0088740.1 MGP_WSBEiJ_G0033120.1 mouse_genomes_project 8 96643421 96645690 + Ndrg4 protein_coding retained_intron MGP_WSBEiJ_T0088741.1 MGP_WSBEiJ_G0033120.1 mouse_genomes_project 8 96646035 96647364 + Ndrg4 protein_coding retained_intron MGP_WSBEiJ_T0087042.1 MGP_WSBEiJ_G0032601.1 mouse_genomes_project 8 22498497 22500302 - MGP_WSBEiJ_P0087042 1810011O10Rik protein_coding protein_coding MGP_WSBEiJ_T0098543.1 MGP_WSBEiJ_G0037206.1 mouse_genomes_project 8 59626631 59626735 + Gm26164 snRNA snRNA MGP_WSBEiJ_T0089061.1 MGP_WSBEiJ_G0033247.1 mouse_genomes_project 8 111965569 111988240 - MGP_WSBEiJ_P0089061 Gm17720 protein_coding protein_coding MGP_WSBEiJ_T0098565.1 MGP_WSBEiJ_G0037228.1 mouse_genomes_project 8 113930008 113930112 + Gm23853 snRNA snRNA MGP_WSBEiJ_T0087078.1 MGP_WSBEiJ_G0032611.1 mouse_genomes_project 8 23101696 23167494 - MGP_WSBEiJ_P0087078 Plekha2 protein_coding protein_coding MGP_WSBEiJ_T0087079.1 MGP_WSBEiJ_G0032611.1 mouse_genomes_project 8 23103393 23167287 - MGP_WSBEiJ_P0087079 Plekha2 protein_coding protein_coding MGP_WSBEiJ_T0087080.1 MGP_WSBEiJ_G0032611.1 mouse_genomes_project 8 23105490 23167074 - MGP_WSBEiJ_P0087080 Plekha2 protein_coding protein_coding MGP_WSBEiJ_T0087081.1 MGP_WSBEiJ_G0032611.1 mouse_genomes_project 8 23125512 23156703 - MGP_WSBEiJ_P0087081 Plekha2 protein_coding protein_coding MGP_WSBEiJ_T0087350.1 MGP_WSBEiJ_G0032705.1 mouse_genomes_project 8 44339127 44363920 - MGP_WSBEiJ_P0087350 Fam149a protein_coding protein_coding MGP_WSBEiJ_T0087351.1 MGP_WSBEiJ_G0032705.1 mouse_genomes_project 8 44339135 44387579 - MGP_WSBEiJ_P0087351 Fam149a protein_coding protein_coding MGP_WSBEiJ_T0087352.1 MGP_WSBEiJ_G0032705.1 mouse_genomes_project 8 44341169 44363817 - MGP_WSBEiJ_P0087352 Fam149a protein_coding protein_coding MGP_WSBEiJ_T0017876.1 MGP_WSBEiJ_G0015138.1 mouse_genomes_project 8 77662945 77743613 + processed_transcript processed_transcript MGP_WSBEiJ_T0017877.1 MGP_WSBEiJ_G0015138.1 mouse_genomes_project 8 77710135 77839027 + processed_transcript processed_transcript MGP_WSBEiJ_T0017878.1 MGP_WSBEiJ_G0015138.1 mouse_genomes_project 8 77834421 77838253 + processed_transcript processed_transcript MGP_WSBEiJ_T0088754.1 MGP_WSBEiJ_G0033125.1 mouse_genomes_project 8 100081609 100494419 - MGP_WSBEiJ_P0088754 Cdh8 protein_coding protein_coding MGP_WSBEiJ_T0088755.1 MGP_WSBEiJ_G0033125.1 mouse_genomes_project 8 100082022 100494419 - MGP_WSBEiJ_P0088755 Cdh8 protein_coding protein_coding MGP_WSBEiJ_T0088756.1 MGP_WSBEiJ_G0033125.1 mouse_genomes_project 8 100085915 100494431 - MGP_WSBEiJ_P0088756 Cdh8 protein_coding protein_coding MGP_WSBEiJ_T0088757.1 MGP_WSBEiJ_G0033125.1 mouse_genomes_project 8 100086106 100494311 - MGP_WSBEiJ_P0088757 Cdh8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088758.1 MGP_WSBEiJ_G0033125.1 mouse_genomes_project 8 100086106 100494463 - MGP_WSBEiJ_P0088758 Cdh8 protein_coding protein_coding MGP_WSBEiJ_T0088759.1 MGP_WSBEiJ_G0033125.1 mouse_genomes_project 8 100231876 100352771 - Cdh8 protein_coding retained_intron MGP_WSBEiJ_T0088760.1 MGP_WSBEiJ_G0033125.1 mouse_genomes_project 8 100290267 100494431 - MGP_WSBEiJ_P0088760 Cdh8 protein_coding protein_coding MGP_WSBEiJ_T0087953.1 MGP_WSBEiJ_G0032874.1 mouse_genomes_project 8 71370927 71377889 - MGP_WSBEiJ_P0087953 Abhd8 protein_coding protein_coding MGP_WSBEiJ_T0089151.1 MGP_WSBEiJ_G0033270.1 mouse_genomes_project 8 113645415 113650226 - Ldhd protein_coding retained_intron MGP_WSBEiJ_T0089152.1 MGP_WSBEiJ_G0033270.1 mouse_genomes_project 8 113647133 113651974 - Ldhd protein_coding retained_intron MGP_WSBEiJ_T0089153.1 MGP_WSBEiJ_G0033270.1 mouse_genomes_project 8 113647901 113652013 - MGP_WSBEiJ_P0089153 Ldhd protein_coding protein_coding MGP_WSBEiJ_T0087909.1 MGP_WSBEiJ_G0032866.1 mouse_genomes_project 8 71125681 71159404 - MGP_WSBEiJ_P0087909 Haus8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087910.1 MGP_WSBEiJ_G0032866.1 mouse_genomes_project 8 71136405 71159877 - MGP_WSBEiJ_P0087910 Haus8 protein_coding protein_coding MGP_WSBEiJ_T0087911.1 MGP_WSBEiJ_G0032866.1 mouse_genomes_project 8 71136405 71159320 - MGP_WSBEiJ_P0087911 Haus8 protein_coding protein_coding MGP_WSBEiJ_T0087912.1 MGP_WSBEiJ_G0032866.1 mouse_genomes_project 8 71140699 71159404 - Haus8 protein_coding processed_transcript MGP_WSBEiJ_T0087913.1 MGP_WSBEiJ_G0032866.1 mouse_genomes_project 8 71141294 71141910 - Haus8 protein_coding retained_intron MGP_WSBEiJ_T0087914.1 MGP_WSBEiJ_G0032866.1 mouse_genomes_project 8 71141321 71159422 - Haus8 protein_coding processed_transcript MGP_WSBEiJ_T0087915.1 MGP_WSBEiJ_G0032866.1 mouse_genomes_project 8 71142294 71159386 - Haus8 protein_coding retained_intron MGP_WSBEiJ_T0087916.1 MGP_WSBEiJ_G0032866.1 mouse_genomes_project 8 71145462 71159302 - Haus8 protein_coding processed_transcript MGP_WSBEiJ_T0010828.1 MGP_WSBEiJ_G0008985.1 mouse_genomes_project 8 112975948 112976029 - Mir3473d miRNA miRNA MGP_WSBEiJ_T0086672.1 MGP_WSBEiJ_G0032462.1 mouse_genomes_project 8 1181280 1184481 + MGP_WSBEiJ_P0086672 Tgfbr3l protein_coding protein_coding MGP_WSBEiJ_T0086673.1 MGP_WSBEiJ_G0032462.1 mouse_genomes_project 8 1181699 1182581 + Tgfbr3l protein_coding processed_transcript MGP_WSBEiJ_T0086674.1 MGP_WSBEiJ_G0032462.1 mouse_genomes_project 8 1183385 1184481 + Tgfbr3l protein_coding processed_transcript MGP_WSBEiJ_T0089605.1 MGP_WSBEiJ_G0033409.1 mouse_genomes_project 8 127785032 127792452 - MGP_WSBEiJ_P0089605 Exoc8 protein_coding protein_coding MGP_WSBEiJ_T0088673.1 MGP_WSBEiJ_G0033098.1 mouse_genomes_project 8 95715343 95716926 + MGP_WSBEiJ_P0088673 Ccl17 protein_coding protein_coding MGP_WSBEiJ_T0099808.1 MGP_WSBEiJ_G0038471.1 mouse_genomes_project 8 97251609 97251741 - Gm22780 snoRNA snoRNA MGP_WSBEiJ_T0086758.1 MGP_WSBEiJ_G0032495.1 mouse_genomes_project 8 9838232 9859188 - MGP_WSBEiJ_P0086758 protein_coding protein_coding MGP_WSBEiJ_T0096855.1 MGP_WSBEiJ_G0035536.1 mouse_genomes_project 8 89742720 89743622 - pseudogene pseudogene MGP_WSBEiJ_T0086974.1 MGP_WSBEiJ_G0032577.1 mouse_genomes_project 8 20052073 20092079 - MGP_WSBEiJ_P0086974 Nek3 protein_coding protein_coding MGP_WSBEiJ_T0086975.1 MGP_WSBEiJ_G0032577.1 mouse_genomes_project 8 20052073 20092102 - MGP_WSBEiJ_P0086975 Nek3 protein_coding protein_coding MGP_WSBEiJ_T0086976.1 MGP_WSBEiJ_G0032577.1 mouse_genomes_project 8 20052076 20088015 - MGP_WSBEiJ_P0086976 Nek3 protein_coding protein_coding MGP_WSBEiJ_T0086977.1 MGP_WSBEiJ_G0032577.1 mouse_genomes_project 8 20052476 20056094 - Nek3 protein_coding retained_intron MGP_WSBEiJ_T0015489.1 MGP_WSBEiJ_G0013619.1 mouse_genomes_project 8 89743129 89743454 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089054.1 MGP_WSBEiJ_G0033243.1 mouse_genomes_project 8 111824387 111838640 - MGP_WSBEiJ_P0089054 Marveld3 protein_coding protein_coding MGP_WSBEiJ_T0089055.1 MGP_WSBEiJ_G0033243.1 mouse_genomes_project 8 111829384 111838675 - MGP_WSBEiJ_P0089055 Marveld3 protein_coding protein_coding MGP_WSBEiJ_T0089056.1 MGP_WSBEiJ_G0033243.1 mouse_genomes_project 8 111836102 111838525 - Marveld3 protein_coding retained_intron MGP_WSBEiJ_T0097107.1 MGP_WSBEiJ_G0035788.1 mouse_genomes_project 8 6712323 6712441 - n-R5s95 rRNA rRNA MGP_WSBEiJ_T0088797.1 MGP_WSBEiJ_G0033143.1 mouse_genomes_project 8 106145578 106155827 - MGP_WSBEiJ_P0088797 Cdh16 protein_coding protein_coding MGP_WSBEiJ_T0010836.1 MGP_WSBEiJ_G0008993.1 mouse_genomes_project 8 123070793 123070878 - Gm22715 miRNA miRNA MGP_WSBEiJ_T0087141.1 MGP_WSBEiJ_G0032628.1 mouse_genomes_project 8 24254416 24280844 + MGP_WSBEiJ_P0087141 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087142.1 MGP_WSBEiJ_G0032628.1 mouse_genomes_project 8 24254419 24280643 + MGP_WSBEiJ_P0087142 protein_coding protein_coding MGP_WSBEiJ_T0087143.1 MGP_WSBEiJ_G0032628.1 mouse_genomes_project 8 24254424 24264174 + MGP_WSBEiJ_P0087143 protein_coding protein_coding MGP_WSBEiJ_T0087144.1 MGP_WSBEiJ_G0032628.1 mouse_genomes_project 8 24254512 24264565 + MGP_WSBEiJ_P0087144 protein_coding protein_coding MGP_WSBEiJ_T0087145.1 MGP_WSBEiJ_G0032628.1 mouse_genomes_project 8 24254700 24264174 + MGP_WSBEiJ_P0087145 protein_coding protein_coding MGP_WSBEiJ_T0087146.1 MGP_WSBEiJ_G0032628.1 mouse_genomes_project 8 24255517 24261256 + MGP_WSBEiJ_P0087146 protein_coding protein_coding MGP_WSBEiJ_T0087147.1 MGP_WSBEiJ_G0032628.1 mouse_genomes_project 8 24258894 24280597 + MGP_WSBEiJ_P0087147 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100154.1 MGP_WSBEiJ_G0038734.1 mouse_genomes_project 8 71875180 71877460 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100155.1 MGP_WSBEiJ_G0038734.1 mouse_genomes_project 8 71875811 71876434 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0087011.1 MGP_WSBEiJ_G0032592.1 mouse_genomes_project 8 20819626 20909943 + MGP_WSBEiJ_P0087011 Kat6a protein_coding protein_coding MGP_WSBEiJ_T0087012.1 MGP_WSBEiJ_G0032592.1 mouse_genomes_project 8 20819640 20909943 + MGP_WSBEiJ_P0087012 Kat6a protein_coding protein_coding MGP_WSBEiJ_T0087013.1 MGP_WSBEiJ_G0032592.1 mouse_genomes_project 8 20876924 20886738 + Kat6a protein_coding processed_transcript MGP_WSBEiJ_T0089359.1 MGP_WSBEiJ_G0033340.1 mouse_genomes_project 8 124297547 124332001 - MGP_WSBEiJ_P0089359 Fbxo31 protein_coding protein_coding MGP_WSBEiJ_T0089360.1 MGP_WSBEiJ_G0033340.1 mouse_genomes_project 8 124302106 124309007 - Fbxo31 protein_coding processed_transcript MGP_WSBEiJ_T0089361.1 MGP_WSBEiJ_G0033340.1 mouse_genomes_project 8 124303730 124309871 - Fbxo31 protein_coding retained_intron MGP_WSBEiJ_T0089362.1 MGP_WSBEiJ_G0033340.1 mouse_genomes_project 8 124316286 124331985 - MGP_WSBEiJ_P0089362 Fbxo31 protein_coding protein_coding MGP_WSBEiJ_T0088762.1 MGP_WSBEiJ_G0033127.1 mouse_genomes_project 8 103989489 103999774 - MGP_WSBEiJ_P0088762 protein_coding protein_coding MGP_WSBEiJ_T0015495.1 MGP_WSBEiJ_G0013625.1 mouse_genomes_project 8 106385098 106386123 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0087163.1 MGP_WSBEiJ_G0032636.1 mouse_genomes_project 8 25399358 25404446 - MGP_WSBEiJ_P0087163 Got1l1 protein_coding protein_coding MGP_WSBEiJ_T0088195.1 MGP_WSBEiJ_G0032955.1 mouse_genomes_project 8 83444233 83445327 - MGP_WSBEiJ_P0088195 Gm10645 protein_coding protein_coding MGP_WSBEiJ_T0087242.1 MGP_WSBEiJ_G0032670.1 mouse_genomes_project 8 34169164 34268261 + MGP_WSBEiJ_P0087242 Mfhas1 protein_coding protein_coding MGP_WSBEiJ_T0087243.1 MGP_WSBEiJ_G0032670.1 mouse_genomes_project 8 34189884 34265410 + Mfhas1 protein_coding processed_transcript MGP_WSBEiJ_T0086714.1 MGP_WSBEiJ_G0032477.1 mouse_genomes_project 8 6349825 6924578 - MGP_WSBEiJ_P0086714 Fam155a protein_coding protein_coding MGP_WSBEiJ_T0017845.1 MGP_WSBEiJ_G0015126.1 mouse_genomes_project 8 4934604 4936588 + Gm28262 processed_transcript lincRNA MGP_WSBEiJ_T0017846.1 MGP_WSBEiJ_G0015126.1 mouse_genomes_project 8 4936551 4941775 + Gm28262 processed_transcript TEC MGP_WSBEiJ_T0008921.1 MGP_WSBEiJ_G0007183.1 mouse_genomes_project 8 9553254 9553656 + Gm29175 lincRNA lincRNA MGP_WSBEiJ_T0088848.1 MGP_WSBEiJ_G0033165.1 mouse_genomes_project 8 106887694 106895374 + MGP_WSBEiJ_P0088848 E2f4 protein_coding protein_coding MGP_WSBEiJ_T0086715.1 MGP_WSBEiJ_G0032478.1 mouse_genomes_project 8 7119134 7126418 - MGP_WSBEiJ_P0086715 Lig4 protein_coding protein_coding MGP_WSBEiJ_T0086716.1 MGP_WSBEiJ_G0032478.1 mouse_genomes_project 8 7119977 7127768 - MGP_WSBEiJ_P0086716 Lig4 protein_coding protein_coding MGP_WSBEiJ_T0087998.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71552958 71600343 - MGP_WSBEiJ_P0087998 protein_coding protein_coding MGP_WSBEiJ_T0087999.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71557608 71600322 - MGP_WSBEiJ_P0087999 protein_coding protein_coding MGP_WSBEiJ_T0088000.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71563187 71569934 - MGP_WSBEiJ_P0088000 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088001.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71563452 71571106 - protein_coding retained_intron MGP_WSBEiJ_T0088002.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71568201 71600338 - MGP_WSBEiJ_P0088002 protein_coding unknown_likely_coding MGP_WSBEiJ_T0088003.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71569996 71574470 - MGP_WSBEiJ_P0088003 protein_coding protein_coding MGP_WSBEiJ_T0088004.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71582193 71586977 - MGP_WSBEiJ_P0088004 protein_coding protein_coding MGP_WSBEiJ_T0088005.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71588845 71600327 - protein_coding retained_intron MGP_WSBEiJ_T0088006.1 MGP_WSBEiJ_G0032889.1 mouse_genomes_project 8 71588850 71596650 - protein_coding retained_intron MGP_WSBEiJ_T0089643.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130093724 130675193 + MGP_WSBEiJ_P0089643 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089644.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130093887 130485955 + MGP_WSBEiJ_P0089644 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089645.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130093887 130675508 + MGP_WSBEiJ_P0089645 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089646.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130093929 130464455 + Pard3 protein_coding retained_intron MGP_WSBEiJ_T0089647.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094076 130675193 + MGP_WSBEiJ_P0089647 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089648.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094090 130421891 + MGP_WSBEiJ_P0089648 Pard3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089649.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094090 130323142 + MGP_WSBEiJ_P0089649 Pard3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089650.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094126 130674032 + MGP_WSBEiJ_P0089650 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089651.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094126 130674032 + MGP_WSBEiJ_P0089651 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089652.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094176 130479897 + MGP_WSBEiJ_P0089652 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089653.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094176 130531526 + MGP_WSBEiJ_P0089653 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089654.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094176 130675193 + MGP_WSBEiJ_P0089654 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089655.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094176 130479897 + MGP_WSBEiJ_P0089655 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089656.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094176 130479897 + MGP_WSBEiJ_P0089656 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089657.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094178 130479828 + MGP_WSBEiJ_P0089657 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089658.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130094185 130454861 + MGP_WSBEiJ_P0089658 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089659.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130103012 130479828 + MGP_WSBEiJ_P0089659 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089660.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130346422 130486274 + MGP_WSBEiJ_P0089660 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089661.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130407091 130412464 + Pard3 protein_coding retained_intron MGP_WSBEiJ_T0089662.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130407987 130450906 + MGP_WSBEiJ_P0089662 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089663.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130423007 130428496 + Pard3 protein_coding retained_intron MGP_WSBEiJ_T0089664.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130440823 130452951 + MGP_WSBEiJ_P0089664 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089665.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130457054 130486278 + MGP_WSBEiJ_P0089665 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089666.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130462902 130531417 + Pard3 protein_coding retained_intron MGP_WSBEiJ_T0089667.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130500877 130531433 + MGP_WSBEiJ_P0089667 Pard3 protein_coding protein_coding MGP_WSBEiJ_T0089668.1 MGP_WSBEiJ_G0033427.1 mouse_genomes_project 8 130640941 130674075 + Pard3 protein_coding processed_transcript MGP_WSBEiJ_T0088050.1 MGP_WSBEiJ_G0032900.1 mouse_genomes_project 8 72075853 72080284 + MGP_WSBEiJ_P0088050 Olfr374 protein_coding protein_coding MGP_WSBEiJ_T0009027.1 MGP_WSBEiJ_G0007261.1 mouse_genomes_project 8 110899525 111093013 + D030068K23Rik lincRNA lincRNA MGP_WSBEiJ_T0009028.1 MGP_WSBEiJ_G0007261.1 mouse_genomes_project 8 110899526 111068680 + D030068K23Rik lincRNA lincRNA MGP_WSBEiJ_T0009029.1 MGP_WSBEiJ_G0007261.1 mouse_genomes_project 8 111088344 111116514 + D030068K23Rik lincRNA lincRNA MGP_WSBEiJ_T0088970.1 MGP_WSBEiJ_G0033216.1 mouse_genomes_project 8 108595377 108607151 - MGP_WSBEiJ_P0088970 Chtf8 protein_coding protein_coding MGP_WSBEiJ_T0088971.1 MGP_WSBEiJ_G0033216.1 mouse_genomes_project 8 108598061 108607151 - MGP_WSBEiJ_P0088971 Chtf8 protein_coding protein_coding MGP_WSBEiJ_T0088972.1 MGP_WSBEiJ_G0033216.1 mouse_genomes_project 8 108598065 108606773 - MGP_WSBEiJ_P0088972 Chtf8 protein_coding protein_coding MGP_WSBEiJ_T0088973.1 MGP_WSBEiJ_G0033216.1 mouse_genomes_project 8 108599514 108607149 - MGP_WSBEiJ_P0088973 Chtf8 protein_coding protein_coding MGP_WSBEiJ_T0088974.1 MGP_WSBEiJ_G0033216.1 mouse_genomes_project 8 108599613 108607073 - MGP_WSBEiJ_P0088974 Chtf8 protein_coding protein_coding MGP_WSBEiJ_T0088975.1 MGP_WSBEiJ_G0033216.1 mouse_genomes_project 8 108599690 108607159 - MGP_WSBEiJ_P0088975 Chtf8 protein_coding protein_coding MGP_WSBEiJ_T0087100.1 MGP_WSBEiJ_G0032614.1 mouse_genomes_project 8 23686067 23705854 - MGP_WSBEiJ_P0087100 Letm2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087148.1 MGP_WSBEiJ_G0032629.1 mouse_genomes_project 8 24298532 24303261 + MGP_WSBEiJ_P0087148 Thap1 protein_coding protein_coding MGP_WSBEiJ_T0087149.1 MGP_WSBEiJ_G0032629.1 mouse_genomes_project 8 24298553 24303096 + MGP_WSBEiJ_P0087149 Thap1 protein_coding protein_coding MGP_WSBEiJ_T0087150.1 MGP_WSBEiJ_G0032629.1 mouse_genomes_project 8 24298575 24299733 + Thap1 protein_coding retained_intron MGP_WSBEiJ_T0010790.1 MGP_WSBEiJ_G0008947.1 mouse_genomes_project 8 72457063 72457137 - Mir7068 miRNA miRNA MGP_WSBEiJ_T0088748.1 MGP_WSBEiJ_G0033122.1 mouse_genomes_project 8 96655510 96748104 - MGP_WSBEiJ_P0088748 Cnot1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0087857.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70404495 70411924 + MGP_WSBEiJ_P0087857 Fkbp8 protein_coding protein_coding MGP_WSBEiJ_T0087858.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70404518 70411922 + MGP_WSBEiJ_P0087858 Fkbp8 protein_coding protein_coding MGP_WSBEiJ_T0087859.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70404533 70409230 + Fkbp8 protein_coding retained_intron MGP_WSBEiJ_T0087860.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70404617 70411923 + MGP_WSBEiJ_P0087860 Fkbp8 protein_coding protein_coding MGP_WSBEiJ_T0087861.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70404780 70407387 + Fkbp8 protein_coding retained_intron MGP_WSBEiJ_T0087862.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70405587 70406352 + MGP_WSBEiJ_P0087862 Fkbp8 protein_coding protein_coding MGP_WSBEiJ_T0087863.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70407912 70410767 + Fkbp8 protein_coding retained_intron MGP_WSBEiJ_T0087864.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70408522 70411552 + Fkbp8 protein_coding retained_intron MGP_WSBEiJ_T0087865.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70408909 70411567 + Fkbp8 protein_coding retained_intron MGP_WSBEiJ_T0087866.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70408960 70411463 + Fkbp8 protein_coding retained_intron MGP_WSBEiJ_T0087867.1 MGP_WSBEiJ_G0032840.1 mouse_genomes_project 8 70410712 70411653 + MGP_WSBEiJ_P0087867 Fkbp8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0088587.1 MGP_WSBEiJ_G0033068.1 mouse_genomes_project 8 93689074 93728645 + MGP_WSBEiJ_P0088587 Slc6a2 protein_coding protein_coding MGP_WSBEiJ_T0088588.1 MGP_WSBEiJ_G0033068.1 mouse_genomes_project 8 93690042 93731659 + MGP_WSBEiJ_P0088588 Slc6a2 protein_coding protein_coding MGP_WSBEiJ_T0010787.1 MGP_WSBEiJ_G0008944.1 mouse_genomes_project 8 70704217 70704275 + Mir7240 miRNA miRNA MGP_WSBEiJ_T0086940.1 MGP_WSBEiJ_G0032551.1 mouse_genomes_project 8 16731163 16733379 + MGP_WSBEiJ_P0086940 Defb46 protein_coding protein_coding MGP_WSBEiJ_T0086663.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1171825 1180964 + MGP_WSBEiJ_P0086663 protein_coding protein_coding MGP_WSBEiJ_T0086664.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1171845 1178899 + MGP_WSBEiJ_P0086664 protein_coding protein_coding MGP_WSBEiJ_T0086665.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1171893 1180964 + MGP_WSBEiJ_P0086665 protein_coding protein_coding MGP_WSBEiJ_T0086666.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1171893 1180964 + MGP_WSBEiJ_P0086666 protein_coding protein_coding MGP_WSBEiJ_T0086667.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1171929 1184481 + MGP_WSBEiJ_P0086667 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0086668.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1173168 1180964 + MGP_WSBEiJ_P0086668 protein_coding protein_coding MGP_WSBEiJ_T0086669.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1176333 1178911 + MGP_WSBEiJ_P0086669 protein_coding protein_coding MGP_WSBEiJ_T0086670.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1177526 1179246 + protein_coding processed_transcript MGP_WSBEiJ_T0086671.1 MGP_WSBEiJ_G0032461.1 mouse_genomes_project 8 1177706 1179369 + protein_coding retained_intron MGP_WSBEiJ_T0087542.1 MGP_WSBEiJ_G0032758.1 mouse_genomes_project 8 59997298 60072220 - MGP_WSBEiJ_P0087542 Gm10283 protein_coding protein_coding MGP_WSBEiJ_T0088090.1 MGP_WSBEiJ_G0032919.1 mouse_genomes_project 8 72740503 72742907 + MGP_WSBEiJ_P0088090 F2rl3 protein_coding protein_coding MGP_WSBEiJ_T0087880.1 MGP_WSBEiJ_G0032850.1 mouse_genomes_project 8 70618815 70624550 + MGP_WSBEiJ_P0087880 Gm3336 protein_coding protein_coding MGP_WSBEiJ_T0002300.1 MGP_WSBEiJ_G0002217.1 mouse_genomes_project 8 124718007 124718805 - TEC TEC MGP_WSBEiJ_T0009004.1 MGP_WSBEiJ_G0007247.1 mouse_genomes_project 8 92711577 92725488 + Gm28516 lincRNA lincRNA MGP_WSBEiJ_T0010806.1 MGP_WSBEiJ_G0008963.1 mouse_genomes_project 8 85268643 85268705 + Mir7069 miRNA miRNA MGP_WSBEiJ_T0097470.1 MGP_WSBEiJ_G0036139.1 mouse_genomes_project 8 122702706 122705477 + Gm15898 sense_intronic sense_intronic MGP_WSBEiJ_T0089641.1 MGP_WSBEiJ_G0033425.1 mouse_genomes_project 8 129953750 129968529 - MGP_WSBEiJ_P0089641 Tomm20 protein_coding protein_coding MGP_WSBEiJ_T0087194.1 MGP_WSBEiJ_G0032654.1 mouse_genomes_project 8 31929185 31969346 + MGP_WSBEiJ_P0087194 Tex15 protein_coding protein_coding MGP_WSBEiJ_T0087195.1 MGP_WSBEiJ_G0032654.1 mouse_genomes_project 8 31929763 31996386 + MGP_WSBEiJ_P0087195 Tex15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0087196.1 MGP_WSBEiJ_G0032654.1 mouse_genomes_project 8 31929763 31984302 + MGP_WSBEiJ_P0087196 Tex15 protein_coding protein_coding MGP_WSBEiJ_T0087197.1 MGP_WSBEiJ_G0032654.1 mouse_genomes_project 8 31981287 31996386 + MGP_WSBEiJ_P0087197 Tex15 protein_coding protein_coding MGP_WSBEiJ_T0010831.1 MGP_WSBEiJ_G0008988.1 mouse_genomes_project 8 113456934 113457057 + Mir1957b miRNA miRNA MGP_WSBEiJ_T0087757.1 MGP_WSBEiJ_G0032822.1 mouse_genomes_project 8 70004760 70021602 + MGP_WSBEiJ_P0087757 protein_coding protein_coding MGP_WSBEiJ_T0087758.1 MGP_WSBEiJ_G0032822.1 mouse_genomes_project 8 70004763 70021601 + MGP_WSBEiJ_P0087758 protein_coding protein_coding MGP_WSBEiJ_T0088705.1 MGP_WSBEiJ_G0033108.1 mouse_genomes_project 8 96004627 96023305 + MGP_WSBEiJ_P0088705 Katnb1 protein_coding protein_coding MGP_WSBEiJ_T0090308.1 MGP_WSBEiJ_G0033661.1 mouse_genomes_project 9 33099480 33101764 - MGP_WSBEiJ_P0090308 Pate1 protein_coding protein_coding MGP_WSBEiJ_T0090309.1 MGP_WSBEiJ_G0033661.1 mouse_genomes_project 9 33099818 33101783 - Pate1 protein_coding retained_intron MGP_WSBEiJ_T0093341.1 MGP_WSBEiJ_G0034441.1 mouse_genomes_project 9 109818532 109828549 + MGP_WSBEiJ_P0093341 Ccdc51 protein_coding protein_coding MGP_WSBEiJ_T0093202.1 MGP_WSBEiJ_G0034420.1 mouse_genomes_project 9 109311439 109313256 - MGP_WSBEiJ_P0093202 Ndufaf3 protein_coding protein_coding MGP_WSBEiJ_T0093203.1 MGP_WSBEiJ_G0034420.1 mouse_genomes_project 9 109311732 109312766 - Ndufaf3 protein_coding retained_intron MGP_WSBEiJ_T0093204.1 MGP_WSBEiJ_G0034420.1 mouse_genomes_project 9 109312032 109312786 - Ndufaf3 protein_coding retained_intron MGP_WSBEiJ_T0089904.1 MGP_WSBEiJ_G0033518.1 mouse_genomes_project 9 16222534 16223476 - MGP_WSBEiJ_P0089904 Olfr846 protein_coding protein_coding MGP_WSBEiJ_T0091092.1 MGP_WSBEiJ_G0033971.1 mouse_genomes_project 9 55469207 55480382 - MGP_WSBEiJ_P0091092 Snx33 protein_coding protein_coding MGP_WSBEiJ_T0017979.1 MGP_WSBEiJ_G0015178.1 mouse_genomes_project 9 108846181 108849795 + 4930447F24Rik processed_transcript antisense MGP_WSBEiJ_T0017980.1 MGP_WSBEiJ_G0015178.1 mouse_genomes_project 9 108848745 108850458 + 4930447F24Rik processed_transcript antisense MGP_WSBEiJ_T0017981.1 MGP_WSBEiJ_G0015178.1 mouse_genomes_project 9 108849218 108849606 + 4930447F24Rik processed_transcript retained_intron MGP_WSBEiJ_T0091806.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74502973 74527737 + MGP_WSBEiJ_P0091806 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0091807.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74502973 74527718 + MGP_WSBEiJ_P0091807 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0091808.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74503036 74503833 + Arpp19 protein_coding retained_intron MGP_WSBEiJ_T0091809.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74503036 74524262 + MGP_WSBEiJ_P0091809 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0091810.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74503038 74525134 + MGP_WSBEiJ_P0091810 Arpp19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091811.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74503077 74527737 + MGP_WSBEiJ_P0091811 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0091812.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74503108 74524317 + MGP_WSBEiJ_P0091812 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0091813.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74503178 74524246 + MGP_WSBEiJ_P0091813 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0091814.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74503276 74524229 + MGP_WSBEiJ_P0091814 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0091815.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74518666 74524807 + MGP_WSBEiJ_P0091815 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0091816.1 MGP_WSBEiJ_G0034149.1 mouse_genomes_project 9 74518740 74525500 + MGP_WSBEiJ_P0091816 Arpp19 protein_coding protein_coding MGP_WSBEiJ_T0089676.1 MGP_WSBEiJ_G0033431.1 mouse_genomes_project 9 29807 92820 + MGP_WSBEiJ_P0089676 Alkbh8 protein_coding protein_coding MGP_WSBEiJ_T0090421.1 MGP_WSBEiJ_G0033712.1 mouse_genomes_project 9 35961763 35962714 + MGP_WSBEiJ_P0090421 Olfr898 protein_coding protein_coding MGP_WSBEiJ_T0010881.1 MGP_WSBEiJ_G0009038.1 mouse_genomes_project 9 50545124 50545241 + Mir6244 miRNA miRNA MGP_WSBEiJ_T0093770.1 MGP_WSBEiJ_G0034539.1 mouse_genomes_project 9 121688607 121691386 + MGP_WSBEiJ_P0093770 Ccr8 protein_coding protein_coding MGP_WSBEiJ_T0005455.1 MGP_WSBEiJ_G0004600.1 mouse_genomes_project 9 108231286 108234465 - Gm34106 antisense antisense MGP_WSBEiJ_T0090429.1 MGP_WSBEiJ_G0033720.1 mouse_genomes_project 9 36118850 36119786 + MGP_WSBEiJ_P0090429 Olfr906 protein_coding protein_coding MGP_WSBEiJ_T0091585.1 MGP_WSBEiJ_G0034106.1 mouse_genomes_project 9 67845285 67856462 + Rora protein_coding processed_transcript MGP_WSBEiJ_T0091586.1 MGP_WSBEiJ_G0034106.1 mouse_genomes_project 9 67845285 68613330 + MGP_WSBEiJ_P0091586 Rora protein_coding protein_coding MGP_WSBEiJ_T0091587.1 MGP_WSBEiJ_G0034106.1 mouse_genomes_project 9 67845390 68589615 + MGP_WSBEiJ_P0091587 Rora protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091588.1 MGP_WSBEiJ_G0034106.1 mouse_genomes_project 9 67846802 67855676 + Rora protein_coding processed_transcript MGP_WSBEiJ_T0091589.1 MGP_WSBEiJ_G0034106.1 mouse_genomes_project 9 68414222 68471392 + Rora protein_coding processed_transcript MGP_WSBEiJ_T0091590.1 MGP_WSBEiJ_G0034106.1 mouse_genomes_project 9 68511043 68604915 + MGP_WSBEiJ_P0091590 Rora protein_coding protein_coding MGP_WSBEiJ_T0098612.1 MGP_WSBEiJ_G0037275.1 mouse_genomes_project 9 67644011 67644118 - Gm22169 snRNA snRNA MGP_WSBEiJ_T0098636.1 MGP_WSBEiJ_G0037299.1 mouse_genomes_project 9 106255558 106255645 - Gm22720 snRNA snRNA MGP_WSBEiJ_T0005370.1 MGP_WSBEiJ_G0004543.1 mouse_genomes_project 9 54070903 54071902 - Gm17226 antisense antisense MGP_WSBEiJ_T0005371.1 MGP_WSBEiJ_G0004543.1 mouse_genomes_project 9 54070914 54072243 - Gm17226 antisense antisense MGP_WSBEiJ_T0098608.1 MGP_WSBEiJ_G0037271.1 mouse_genomes_project 9 64964798 64964906 + Gm23248 snRNA snRNA MGP_WSBEiJ_T0089711.1 MGP_WSBEiJ_G0033446.1 mouse_genomes_project 9 4171250 4176665 + MGP_WSBEiJ_P0089711 Mmp12 protein_coding protein_coding MGP_WSBEiJ_T0089712.1 MGP_WSBEiJ_G0033446.1 mouse_genomes_project 9 4174251 4189669 + MGP_WSBEiJ_P0089712 Mmp12 protein_coding protein_coding MGP_WSBEiJ_T0089713.1 MGP_WSBEiJ_G0033446.1 mouse_genomes_project 9 4174251 4200783 + MGP_WSBEiJ_P0089713 Mmp12 protein_coding protein_coding MGP_WSBEiJ_T0089714.1 MGP_WSBEiJ_G0033446.1 mouse_genomes_project 9 4174283 4186871 + Mmp12 protein_coding retained_intron MGP_WSBEiJ_T0089715.1 MGP_WSBEiJ_G0033446.1 mouse_genomes_project 9 4174283 4175211 + Mmp12 protein_coding processed_transcript MGP_WSBEiJ_T0089716.1 MGP_WSBEiJ_G0033446.1 mouse_genomes_project 9 4174283 4188096 + MGP_WSBEiJ_P0089716 Mmp12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089717.1 MGP_WSBEiJ_G0033446.1 mouse_genomes_project 9 4174392 4187900 + MGP_WSBEiJ_P0089717 Mmp12 protein_coding protein_coding MGP_WSBEiJ_T0090305.1 MGP_WSBEiJ_G0033660.1 mouse_genomes_project 9 33046620 33049706 - MGP_WSBEiJ_P0090305 Pate3 protein_coding protein_coding MGP_WSBEiJ_T0092265.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96109477 96212790 + MGP_WSBEiJ_P0092265 Xrn1 protein_coding protein_coding MGP_WSBEiJ_T0092266.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96109484 96218096 + MGP_WSBEiJ_P0092266 Xrn1 protein_coding protein_coding MGP_WSBEiJ_T0092267.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96109510 96122413 + MGP_WSBEiJ_P0092267 Xrn1 protein_coding protein_coding MGP_WSBEiJ_T0092268.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96109549 96156840 + Xrn1 protein_coding retained_intron MGP_WSBEiJ_T0092269.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96109576 96212790 + Xrn1 protein_coding retained_intron MGP_WSBEiJ_T0092270.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96109579 96169461 + MGP_WSBEiJ_P0092270 Xrn1 protein_coding protein_coding MGP_WSBEiJ_T0092271.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96126386 96130001 + Xrn1 protein_coding retained_intron MGP_WSBEiJ_T0092272.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96128158 96132974 + Xrn1 protein_coding retained_intron MGP_WSBEiJ_T0092273.1 MGP_WSBEiJ_G0034256.1 mouse_genomes_project 9 96174759 96177805 + Xrn1 protein_coding retained_intron MGP_WSBEiJ_T0009074.1 MGP_WSBEiJ_G0007301.1 mouse_genomes_project 9 32914255 32916211 - lincRNA lincRNA MGP_WSBEiJ_T0093708.1 MGP_WSBEiJ_G0034517.1 mouse_genomes_project 9 120446742 120569303 + MGP_WSBEiJ_P0093708 Ctdspl protein_coding protein_coding MGP_WSBEiJ_T0093709.1 MGP_WSBEiJ_G0034517.1 mouse_genomes_project 9 120448105 120565954 + MGP_WSBEiJ_P0093709 Ctdspl protein_coding protein_coding MGP_WSBEiJ_T0093710.1 MGP_WSBEiJ_G0034517.1 mouse_genomes_project 9 120451110 120557789 + Ctdspl protein_coding processed_transcript MGP_WSBEiJ_T0093711.1 MGP_WSBEiJ_G0034517.1 mouse_genomes_project 9 120557161 120566214 + Ctdspl protein_coding retained_intron MGP_WSBEiJ_T0005402.1 MGP_WSBEiJ_G0004565.1 mouse_genomes_project 9 79440423 79442555 + 4930562D21Rik antisense antisense MGP_WSBEiJ_T0093661.1 MGP_WSBEiJ_G0034506.1 mouse_genomes_project 9 116284919 116546633 + MGP_WSBEiJ_P0093661 Osbpl10 protein_coding protein_coding MGP_WSBEiJ_T0093662.1 MGP_WSBEiJ_G0034506.1 mouse_genomes_project 9 116296666 116546635 + MGP_WSBEiJ_P0093662 Osbpl10 protein_coding protein_coding MGP_WSBEiJ_T0093663.1 MGP_WSBEiJ_G0034506.1 mouse_genomes_project 9 116306838 116479873 + MGP_WSBEiJ_P0093663 Osbpl10 protein_coding protein_coding MGP_WSBEiJ_T0093664.1 MGP_WSBEiJ_G0034506.1 mouse_genomes_project 9 116326786 116546629 + MGP_WSBEiJ_P0093664 Osbpl10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093665.1 MGP_WSBEiJ_G0034506.1 mouse_genomes_project 9 116364440 116377250 + MGP_WSBEiJ_P0093665 Osbpl10 protein_coding protein_coding MGP_WSBEiJ_T0093666.1 MGP_WSBEiJ_G0034506.1 mouse_genomes_project 9 116377216 116546633 + MGP_WSBEiJ_P0093666 Osbpl10 protein_coding protein_coding MGP_WSBEiJ_T0093667.1 MGP_WSBEiJ_G0034506.1 mouse_genomes_project 9 116394310 116533361 + Osbpl10 protein_coding processed_transcript MGP_WSBEiJ_T0093668.1 MGP_WSBEiJ_G0034506.1 mouse_genomes_project 9 116427387 116531767 + Osbpl10 protein_coding processed_transcript MGP_WSBEiJ_T0093137.1 MGP_WSBEiJ_G0034414.1 mouse_genomes_project 9 109204415 109209827 + MGP_WSBEiJ_P0093137 Ccdc71 protein_coding protein_coding MGP_WSBEiJ_T0093138.1 MGP_WSBEiJ_G0034414.1 mouse_genomes_project 9 109204423 109207156 + MGP_WSBEiJ_P0093138 Ccdc71 protein_coding protein_coding MGP_WSBEiJ_T0093139.1 MGP_WSBEiJ_G0034414.1 mouse_genomes_project 9 109205308 109209695 + MGP_WSBEiJ_P0093139 Ccdc71 protein_coding protein_coding MGP_WSBEiJ_T0099868.1 MGP_WSBEiJ_G0038531.1 mouse_genomes_project 9 74235508 74235651 + Gm22315 snoRNA snoRNA MGP_WSBEiJ_T0010852.1 MGP_WSBEiJ_G0009009.1 mouse_genomes_project 9 6738158 6738249 + Mir6237 miRNA miRNA MGP_WSBEiJ_T0015628.1 MGP_WSBEiJ_G0013758.1 mouse_genomes_project 9 104678845 104679469 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002308.1 MGP_WSBEiJ_G0002225.1 mouse_genomes_project 9 29890320 29892234 - TEC TEC MGP_WSBEiJ_T0091361.1 MGP_WSBEiJ_G0034045.1 mouse_genomes_project 9 62075559 62292275 - MGP_WSBEiJ_P0091361 Map2k5 protein_coding protein_coding MGP_WSBEiJ_T0091582.1 MGP_WSBEiJ_G0034104.1 mouse_genomes_project 9 66985875 66987669 - MGP_WSBEiJ_P0091582 C2cd4a protein_coding protein_coding MGP_WSBEiJ_T0010917.1 MGP_WSBEiJ_G0009074.1 mouse_genomes_project 9 113176572 113176648 - Mir128-2 miRNA miRNA MGP_WSBEiJ_T0093234.1 MGP_WSBEiJ_G0034425.1 mouse_genomes_project 9 109419954 109422267 + Slc25a20 protein_coding retained_intron MGP_WSBEiJ_T0093235.1 MGP_WSBEiJ_G0034425.1 mouse_genomes_project 9 109419964 109441981 + MGP_WSBEiJ_P0093235 Slc25a20 protein_coding protein_coding MGP_WSBEiJ_T0093236.1 MGP_WSBEiJ_G0034425.1 mouse_genomes_project 9 109428644 109436848 + Slc25a20 protein_coding retained_intron MGP_WSBEiJ_T0091057.1 MGP_WSBEiJ_G0033958.1 mouse_genomes_project 9 53847314 53966963 + MGP_WSBEiJ_P0091057 Tmem266 protein_coding protein_coding MGP_WSBEiJ_T0091058.1 MGP_WSBEiJ_G0033958.1 mouse_genomes_project 9 53853571 53965971 + Tmem266 protein_coding processed_transcript MGP_WSBEiJ_T0091856.1 MGP_WSBEiJ_G0034163.1 mouse_genomes_project 9 75695855 75744858 - MGP_WSBEiJ_P0091856 Gfral protein_coding protein_coding MGP_WSBEiJ_T0091857.1 MGP_WSBEiJ_G0034163.1 mouse_genomes_project 9 75695855 75744858 - MGP_WSBEiJ_P0091857 Gfral protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091737.1 MGP_WSBEiJ_G0034132.1 mouse_genomes_project 9 71919117 71995401 + Rfx7 protein_coding processed_transcript MGP_WSBEiJ_T0091738.1 MGP_WSBEiJ_G0034132.1 mouse_genomes_project 9 71919483 72002753 + MGP_WSBEiJ_P0091738 Rfx7 protein_coding protein_coding MGP_WSBEiJ_T0091739.1 MGP_WSBEiJ_G0034132.1 mouse_genomes_project 9 71919615 72002816 + MGP_WSBEiJ_P0091739 Rfx7 protein_coding protein_coding MGP_WSBEiJ_T0091740.1 MGP_WSBEiJ_G0034132.1 mouse_genomes_project 9 71919700 72015640 + MGP_WSBEiJ_P0091740 Rfx7 protein_coding protein_coding MGP_WSBEiJ_T0091741.1 MGP_WSBEiJ_G0034132.1 mouse_genomes_project 9 71989364 71992775 + Rfx7 protein_coding retained_intron MGP_WSBEiJ_T0091742.1 MGP_WSBEiJ_G0034132.1 mouse_genomes_project 9 72000769 72002804 + Rfx7 protein_coding retained_intron MGP_WSBEiJ_T0093457.1 MGP_WSBEiJ_G0034458.1 mouse_genomes_project 9 111376438 111379722 + MGP_WSBEiJ_P0093457 Ngp protein_coding protein_coding MGP_WSBEiJ_T0093351.1 MGP_WSBEiJ_G0034444.1 mouse_genomes_project 9 109922539 109941279 - MGP_WSBEiJ_P0093351 Fbxw13 protein_coding protein_coding MGP_WSBEiJ_T0093352.1 MGP_WSBEiJ_G0034444.1 mouse_genomes_project 9 109922560 109941266 - MGP_WSBEiJ_P0093352 Fbxw13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093353.1 MGP_WSBEiJ_G0034444.1 mouse_genomes_project 9 109924838 109940824 - MGP_WSBEiJ_P0093353 Fbxw13 protein_coding protein_coding MGP_WSBEiJ_T0092384.1 MGP_WSBEiJ_G0034283.1 mouse_genomes_project 9 99607620 99659157 - MGP_WSBEiJ_P0092384 Esyt3 protein_coding protein_coding MGP_WSBEiJ_T0092385.1 MGP_WSBEiJ_G0034283.1 mouse_genomes_project 9 99616923 99620030 - Esyt3 protein_coding retained_intron MGP_WSBEiJ_T0092386.1 MGP_WSBEiJ_G0034283.1 mouse_genomes_project 9 99616967 99622337 - MGP_WSBEiJ_P0092386 Esyt3 protein_coding protein_coding MGP_WSBEiJ_T0092387.1 MGP_WSBEiJ_G0034283.1 mouse_genomes_project 9 99632105 99638189 - Esyt3 protein_coding retained_intron MGP_WSBEiJ_T0092388.1 MGP_WSBEiJ_G0034283.1 mouse_genomes_project 9 99656236 99659196 - Esyt3 protein_coding retained_intron MGP_WSBEiJ_T0093504.1 MGP_WSBEiJ_G0034465.1 mouse_genomes_project 9 111693334 111719935 - MGP_WSBEiJ_P0093504 Pth1r protein_coding protein_coding MGP_WSBEiJ_T0093505.1 MGP_WSBEiJ_G0034465.1 mouse_genomes_project 9 111693337 111714637 - MGP_WSBEiJ_P0093505 Pth1r protein_coding protein_coding MGP_WSBEiJ_T0093506.1 MGP_WSBEiJ_G0034465.1 mouse_genomes_project 9 111693391 111713896 - MGP_WSBEiJ_P0093506 Pth1r protein_coding protein_coding MGP_WSBEiJ_T0093507.1 MGP_WSBEiJ_G0034465.1 mouse_genomes_project 9 111698686 111719869 - MGP_WSBEiJ_P0093507 Pth1r protein_coding protein_coding MGP_WSBEiJ_T0093508.1 MGP_WSBEiJ_G0034465.1 mouse_genomes_project 9 111702828 111719958 - MGP_WSBEiJ_P0093508 Pth1r protein_coding protein_coding MGP_WSBEiJ_T0015574.1 MGP_WSBEiJ_G0013704.1 mouse_genomes_project 9 83290216 83290604 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090544.1 MGP_WSBEiJ_G0033793.1 mouse_genomes_project 9 39926881 40093880 - MGP_WSBEiJ_P0090544 Sorl1 protein_coding protein_coding MGP_WSBEiJ_T0090545.1 MGP_WSBEiJ_G0033793.1 mouse_genomes_project 9 39931894 39936739 - Sorl1 protein_coding retained_intron MGP_WSBEiJ_T0090546.1 MGP_WSBEiJ_G0033793.1 mouse_genomes_project 9 39939739 39946711 - Sorl1 protein_coding retained_intron MGP_WSBEiJ_T0090547.1 MGP_WSBEiJ_G0033793.1 mouse_genomes_project 9 39946648 39947978 - Sorl1 protein_coding processed_transcript MGP_WSBEiJ_T0015644.1 MGP_WSBEiJ_G0013774.1 mouse_genomes_project 9 122003360 122003787 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009184.1 MGP_WSBEiJ_G0007388.1 mouse_genomes_project 9 109725267 109725624 - Gm38004 lincRNA lincRNA MGP_WSBEiJ_T0092143.1 MGP_WSBEiJ_G0034226.1 mouse_genomes_project 9 88505701 88531402 + MGP_WSBEiJ_P0092143 Zfp949 protein_coding protein_coding MGP_WSBEiJ_T0092144.1 MGP_WSBEiJ_G0034226.1 mouse_genomes_project 9 88505766 88528523 + Zfp949 protein_coding retained_intron MGP_WSBEiJ_T0092145.1 MGP_WSBEiJ_G0034226.1 mouse_genomes_project 9 88505864 88531402 + MGP_WSBEiJ_P0092145 Zfp949 protein_coding protein_coding MGP_WSBEiJ_T0090140.1 MGP_WSBEiJ_G0033613.1 mouse_genomes_project 9 21670561 21671204 + MGP_WSBEiJ_P0090140 Cypt4 protein_coding protein_coding MGP_WSBEiJ_T0090500.1 MGP_WSBEiJ_G0033779.1 mouse_genomes_project 9 37980621 37981737 - MGP_WSBEiJ_P0090500 Olfr985 protein_coding protein_coding MGP_WSBEiJ_T0092928.1 MGP_WSBEiJ_G0034382.1 mouse_genomes_project 9 108361787 108366815 - MGP_WSBEiJ_P0092928 Gnat1 protein_coding protein_coding MGP_WSBEiJ_T0092929.1 MGP_WSBEiJ_G0034382.1 mouse_genomes_project 9 108361790 108366737 - Gnat1 protein_coding retained_intron MGP_WSBEiJ_T0092930.1 MGP_WSBEiJ_G0034382.1 mouse_genomes_project 9 108362610 108363755 - Gnat1 protein_coding retained_intron MGP_WSBEiJ_T0092931.1 MGP_WSBEiJ_G0034382.1 mouse_genomes_project 9 108363558 108365527 - Gnat1 protein_coding processed_transcript MGP_WSBEiJ_T0092932.1 MGP_WSBEiJ_G0034382.1 mouse_genomes_project 9 108364244 108366717 - Gnat1 protein_coding retained_intron MGP_WSBEiJ_T0090938.1 MGP_WSBEiJ_G0033916.1 mouse_genomes_project 9 49621922 49649964 + MGP_WSBEiJ_P0090938 Pou2af1 protein_coding protein_coding MGP_WSBEiJ_T0090334.1 MGP_WSBEiJ_G0033675.1 mouse_genomes_project 9 34220079 34263790 - MGP_WSBEiJ_P0090334 Stt3a protein_coding protein_coding MGP_WSBEiJ_T0090335.1 MGP_WSBEiJ_G0033675.1 mouse_genomes_project 9 34223162 34249413 - MGP_WSBEiJ_P0090335 Stt3a protein_coding protein_coding MGP_WSBEiJ_T0090336.1 MGP_WSBEiJ_G0033675.1 mouse_genomes_project 9 34246879 34263755 - MGP_WSBEiJ_P0090336 Stt3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090337.1 MGP_WSBEiJ_G0033675.1 mouse_genomes_project 9 34252635 34253639 - Stt3a protein_coding retained_intron MGP_WSBEiJ_T0090338.1 MGP_WSBEiJ_G0033675.1 mouse_genomes_project 9 34253058 34263486 - MGP_WSBEiJ_P0090338 Stt3a protein_coding protein_coding MGP_WSBEiJ_T0090339.1 MGP_WSBEiJ_G0033675.1 mouse_genomes_project 9 34258779 34263709 - Stt3a protein_coding retained_intron MGP_WSBEiJ_T0090340.1 MGP_WSBEiJ_G0033675.1 mouse_genomes_project 9 34258999 34263752 - Stt3a protein_coding retained_intron MGP_WSBEiJ_T0010874.1 MGP_WSBEiJ_G0009031.1 mouse_genomes_project 9 42492128 42492194 + Mir7085 miRNA miRNA MGP_WSBEiJ_T0005352.1 MGP_WSBEiJ_G0004532.1 mouse_genomes_project 9 39988315 40000512 + Gm16214 antisense antisense MGP_WSBEiJ_T0090315.1 MGP_WSBEiJ_G0033667.1 mouse_genomes_project 9 33557492 33563312 - MGP_WSBEiJ_P0090315 Gm5916 protein_coding protein_coding MGP_WSBEiJ_T0091149.1 MGP_WSBEiJ_G0033991.1 mouse_genomes_project 9 56233768 56254360 - MGP_WSBEiJ_P0091149 Csk protein_coding protein_coding MGP_WSBEiJ_T0090433.1 MGP_WSBEiJ_G0033724.1 mouse_genomes_project 9 36220460 36223860 + MGP_WSBEiJ_P0090433 Olfr913 protein_coding protein_coding MGP_WSBEiJ_T0005476.1 MGP_WSBEiJ_G0004618.1 mouse_genomes_project 9 117357152 117369033 - Gm16142 antisense antisense MGP_WSBEiJ_T0091556.1 MGP_WSBEiJ_G0034100.1 mouse_genomes_project 9 66070821 66091968 - MGP_WSBEiJ_P0091556 Lactb protein_coding protein_coding MGP_WSBEiJ_T0017943.1 MGP_WSBEiJ_G0015164.1 mouse_genomes_project 9 74301786 74306679 + Gm16551 processed_transcript lincRNA MGP_WSBEiJ_T0017944.1 MGP_WSBEiJ_G0015164.1 mouse_genomes_project 9 74302205 74313903 + Gm16551 processed_transcript lincRNA MGP_WSBEiJ_T0017945.1 MGP_WSBEiJ_G0015164.1 mouse_genomes_project 9 74302271 74303136 + Gm16551 processed_transcript retained_intron MGP_WSBEiJ_T0017946.1 MGP_WSBEiJ_G0015164.1 mouse_genomes_project 9 74302294 74306678 + Gm16551 processed_transcript lincRNA MGP_WSBEiJ_T0017947.1 MGP_WSBEiJ_G0015164.1 mouse_genomes_project 9 74302763 74305010 + Gm16551 processed_transcript retained_intron MGP_WSBEiJ_T0005331.1 MGP_WSBEiJ_G0004517.1 mouse_genomes_project 9 4512008 4538200 - AV064505 antisense antisense MGP_WSBEiJ_T0091912.1 MGP_WSBEiJ_G0034176.1 mouse_genomes_project 9 77888434 77896040 + MGP_WSBEiJ_P0091912 protein_coding protein_coding MGP_WSBEiJ_T0089912.1 MGP_WSBEiJ_G0033526.1 mouse_genomes_project 9 16469702 16495918 + MGP_WSBEiJ_P0089912 Zfp317 protein_coding unknown_likely_coding MGP_WSBEiJ_T0098577.1 MGP_WSBEiJ_G0037240.1 mouse_genomes_project 9 3519291 3519396 - Gm23097 snRNA snRNA MGP_WSBEiJ_T0015558.1 MGP_WSBEiJ_G0013688.1 mouse_genomes_project 9 76222995 76223749 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009141.1 MGP_WSBEiJ_G0007355.1 mouse_genomes_project 9 89780358 89821429 + 4930524O08Rik lincRNA lincRNA MGP_WSBEiJ_T0009142.1 MGP_WSBEiJ_G0007355.1 mouse_genomes_project 9 89780783 89792332 + 4930524O08Rik lincRNA lincRNA MGP_WSBEiJ_T0009143.1 MGP_WSBEiJ_G0007355.1 mouse_genomes_project 9 89780821 89791674 + 4930524O08Rik lincRNA lincRNA MGP_WSBEiJ_T0098611.1 MGP_WSBEiJ_G0037274.1 mouse_genomes_project 9 66227101 66227249 + Gm22145 snRNA snRNA MGP_WSBEiJ_T0090613.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42357423 42362833 - Abcg4 protein_coding retained_intron MGP_WSBEiJ_T0090614.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42357423 42374583 - MGP_WSBEiJ_P0090614 Abcg4 protein_coding protein_coding MGP_WSBEiJ_T0090615.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42357425 42375651 - MGP_WSBEiJ_P0090615 Abcg4 protein_coding protein_coding MGP_WSBEiJ_T0090616.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42358687 42364057 - Abcg4 protein_coding retained_intron MGP_WSBEiJ_T0090617.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42359330 42363819 - MGP_WSBEiJ_P0090617 Abcg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090618.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42361289 42374575 - Abcg4 protein_coding processed_transcript MGP_WSBEiJ_T0090619.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42361721 42364010 - Abcg4 protein_coding retained_intron MGP_WSBEiJ_T0090620.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42364866 42365877 - Abcg4 protein_coding retained_intron MGP_WSBEiJ_T0090621.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42366064 42375393 - MGP_WSBEiJ_P0090621 Abcg4 protein_coding protein_coding MGP_WSBEiJ_T0090622.1 MGP_WSBEiJ_G0033816.1 mouse_genomes_project 9 42366127 42375174 - MGP_WSBEiJ_P0090622 Abcg4 protein_coding protein_coding MGP_WSBEiJ_T0010885.1 MGP_WSBEiJ_G0009042.1 mouse_genomes_project 9 60979565 60979642 - Mir5133 miRNA miRNA MGP_WSBEiJ_T0017967.1 MGP_WSBEiJ_G0015173.1 mouse_genomes_project 9 98815402 98816770 - 4930579K19Rik processed_transcript lincRNA MGP_WSBEiJ_T0017968.1 MGP_WSBEiJ_G0015173.1 mouse_genomes_project 9 98815635 98816789 - 4930579K19Rik processed_transcript TEC MGP_WSBEiJ_T0017969.1 MGP_WSBEiJ_G0015173.1 mouse_genomes_project 9 98816137 98816789 - 4930579K19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0090858.1 MGP_WSBEiJ_G0033901.1 mouse_genomes_project 9 48985205 48999896 - MGP_WSBEiJ_P0090858 AU019823 protein_coding protein_coding MGP_WSBEiJ_T0090859.1 MGP_WSBEiJ_G0033901.1 mouse_genomes_project 9 48985209 48999896 - MGP_WSBEiJ_P0090859 AU019823 protein_coding protein_coding MGP_WSBEiJ_T0090860.1 MGP_WSBEiJ_G0033901.1 mouse_genomes_project 9 48987524 48999699 - MGP_WSBEiJ_P0090860 AU019823 protein_coding protein_coding MGP_WSBEiJ_T0090861.1 MGP_WSBEiJ_G0033901.1 mouse_genomes_project 9 48987633 48999713 - MGP_WSBEiJ_P0090861 AU019823 protein_coding protein_coding MGP_WSBEiJ_T0090862.1 MGP_WSBEiJ_G0033901.1 mouse_genomes_project 9 48987666 48999696 - MGP_WSBEiJ_P0090862 AU019823 protein_coding protein_coding MGP_WSBEiJ_T0090955.1 MGP_WSBEiJ_G0033923.1 mouse_genomes_project 9 51134989 51141372 - MGP_WSBEiJ_P0090955 AI593442 protein_coding protein_coding MGP_WSBEiJ_T0091070.1 MGP_WSBEiJ_G0033962.1 mouse_genomes_project 9 54486621 54496878 - MGP_WSBEiJ_P0091070 4930563M21Rik protein_coding protein_coding MGP_WSBEiJ_T0002320.1 MGP_WSBEiJ_G0002237.1 mouse_genomes_project 9 71250881 71253619 - TEC TEC MGP_WSBEiJ_T0093433.1 MGP_WSBEiJ_G0034454.1 mouse_genomes_project 9 111191847 111207597 + MGP_WSBEiJ_P0093433 Cspg5 protein_coding protein_coding MGP_WSBEiJ_T0093434.1 MGP_WSBEiJ_G0034454.1 mouse_genomes_project 9 111191847 111207598 + MGP_WSBEiJ_P0093434 Cspg5 protein_coding protein_coding MGP_WSBEiJ_T0093435.1 MGP_WSBEiJ_G0034454.1 mouse_genomes_project 9 111193547 111195669 + Cspg5 protein_coding retained_intron MGP_WSBEiJ_T0093436.1 MGP_WSBEiJ_G0034454.1 mouse_genomes_project 9 111193595 111207585 + MGP_WSBEiJ_P0093436 Cspg5 protein_coding protein_coding MGP_WSBEiJ_T0093437.1 MGP_WSBEiJ_G0034454.1 mouse_genomes_project 9 111194128 111207597 + MGP_WSBEiJ_P0093437 Cspg5 protein_coding protein_coding MGP_WSBEiJ_T0015590.1 MGP_WSBEiJ_G0013720.1 mouse_genomes_project 9 90730892 90731184 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093768.1 MGP_WSBEiJ_G0034538.1 mouse_genomes_project 9 121605374 121615209 - MGP_WSBEiJ_P0093768 Xirp1 protein_coding protein_coding MGP_WSBEiJ_T0093646.1 MGP_WSBEiJ_G0034494.1 mouse_genomes_project 9 115636389 115651828 - MGP_WSBEiJ_P0093646 Crtap protein_coding protein_coding MGP_WSBEiJ_T0090460.1 MGP_WSBEiJ_G0033745.1 mouse_genomes_project 9 36793216 36794161 + MGP_WSBEiJ_P0090460 protein_coding protein_coding MGP_WSBEiJ_T0091167.1 MGP_WSBEiJ_G0033998.1 mouse_genomes_project 9 56574511 56600183 + MGP_WSBEiJ_P0091167 Sema7a protein_coding protein_coding MGP_WSBEiJ_T0002389.1 MGP_WSBEiJ_G0002305.1 mouse_genomes_project 9 101549940 101551824 + TEC TEC MGP_WSBEiJ_T0093255.1 MGP_WSBEiJ_G0034428.1 mouse_genomes_project 9 109578770 109589240 + MGP_WSBEiJ_P0093255 Nckipsd protein_coding protein_coding MGP_WSBEiJ_T0093256.1 MGP_WSBEiJ_G0034428.1 mouse_genomes_project 9 109578775 109581552 + MGP_WSBEiJ_P0093256 Nckipsd protein_coding protein_coding MGP_WSBEiJ_T0093257.1 MGP_WSBEiJ_G0034428.1 mouse_genomes_project 9 109578823 109582008 + MGP_WSBEiJ_P0093257 Nckipsd protein_coding protein_coding MGP_WSBEiJ_T0093258.1 MGP_WSBEiJ_G0034428.1 mouse_genomes_project 9 109582327 109584484 + MGP_WSBEiJ_P0093258 Nckipsd protein_coding protein_coding MGP_WSBEiJ_T0093259.1 MGP_WSBEiJ_G0034428.1 mouse_genomes_project 9 109583830 109584729 + Nckipsd protein_coding retained_intron MGP_WSBEiJ_T0093260.1 MGP_WSBEiJ_G0034428.1 mouse_genomes_project 9 109585238 109586517 + Nckipsd protein_coding retained_intron MGP_WSBEiJ_T0017927.1 MGP_WSBEiJ_G0015157.1 mouse_genomes_project 9 55619720 55637493 - Gm10658 processed_transcript processed_transcript MGP_WSBEiJ_T0017928.1 MGP_WSBEiJ_G0015157.1 mouse_genomes_project 9 55620293 55637652 - Gm10658 processed_transcript processed_transcript MGP_WSBEiJ_T0093243.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109554218 109568414 + MGP_WSBEiJ_P0093243 Ip6k2 protein_coding protein_coding MGP_WSBEiJ_T0093244.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109554218 109576751 + MGP_WSBEiJ_P0093244 Ip6k2 protein_coding protein_coding MGP_WSBEiJ_T0093245.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109554244 109569259 + Ip6k2 protein_coding retained_intron MGP_WSBEiJ_T0093246.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109554285 109568117 + MGP_WSBEiJ_P0093246 Ip6k2 protein_coding protein_coding MGP_WSBEiJ_T0093247.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109554287 109567402 + Ip6k2 protein_coding retained_intron MGP_WSBEiJ_T0093248.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109554287 109567770 + MGP_WSBEiJ_P0093248 Ip6k2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093249.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109566418 109569694 + MGP_WSBEiJ_P0093249 Ip6k2 protein_coding protein_coding MGP_WSBEiJ_T0093250.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109566418 109576756 + MGP_WSBEiJ_P0093250 Ip6k2 protein_coding protein_coding MGP_WSBEiJ_T0093251.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109566488 109567867 + MGP_WSBEiJ_P0093251 Ip6k2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093252.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109566555 109568419 + MGP_WSBEiJ_P0093252 Ip6k2 protein_coding protein_coding MGP_WSBEiJ_T0093253.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109566776 109568118 + MGP_WSBEiJ_P0093253 Ip6k2 protein_coding protein_coding MGP_WSBEiJ_T0093254.1 MGP_WSBEiJ_G0034427.1 mouse_genomes_project 9 109568611 109569797 + Ip6k2 protein_coding retained_intron MGP_WSBEiJ_T0093787.1 MGP_WSBEiJ_G0034544.1 mouse_genomes_project 9 122118630 122121159 + MGP_WSBEiJ_P0093787 Eif1b protein_coding protein_coding MGP_WSBEiJ_T0015554.1 MGP_WSBEiJ_G0013684.1 mouse_genomes_project 9 74041736 74041926 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015610.1 MGP_WSBEiJ_G0013740.1 mouse_genomes_project 9 97252459 97252760 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098581.1 MGP_WSBEiJ_G0037244.1 mouse_genomes_project 9 15544514 15544616 + Gm24546 snRNA snRNA MGP_WSBEiJ_T0090568.1 MGP_WSBEiJ_G0033802.1 mouse_genomes_project 9 41284595 41304431 + MGP_WSBEiJ_P0090568 protein_coding protein_coding MGP_WSBEiJ_T0092152.1 MGP_WSBEiJ_G0034232.1 mouse_genomes_project 9 89648774 89654701 - MGP_WSBEiJ_P0092152 Tmed3 protein_coding protein_coding MGP_WSBEiJ_T0092153.1 MGP_WSBEiJ_G0034232.1 mouse_genomes_project 9 89652858 89654456 - Tmed3 protein_coding retained_intron MGP_WSBEiJ_T0010847.1 MGP_WSBEiJ_G0009004.1 mouse_genomes_project 9 1122940 1123007 - Gm23992 miRNA miRNA MGP_WSBEiJ_T0009080.1 MGP_WSBEiJ_G0007305.1 mouse_genomes_project 9 34163993 34183471 - 1700027I24Rik lincRNA lincRNA MGP_WSBEiJ_T0089910.1 MGP_WSBEiJ_G0033524.1 mouse_genomes_project 9 16412836 16413784 - MGP_WSBEiJ_P0089910 Olfr854 protein_coding protein_coding MGP_WSBEiJ_T0090199.1 MGP_WSBEiJ_G0033632.1 mouse_genomes_project 9 28155793 28179131 - MGP_WSBEiJ_P0090199 Adamts15 protein_coding protein_coding MGP_WSBEiJ_T0093097.1 MGP_WSBEiJ_G0034406.1 mouse_genomes_project 9 109030501 109033491 - MGP_WSBEiJ_P0093097 Tcta protein_coding protein_coding MGP_WSBEiJ_T0093098.1 MGP_WSBEiJ_G0034406.1 mouse_genomes_project 9 109031197 109033661 - MGP_WSBEiJ_P0093098 Tcta protein_coding protein_coding MGP_WSBEiJ_T0093099.1 MGP_WSBEiJ_G0034406.1 mouse_genomes_project 9 109031433 109033449 - MGP_WSBEiJ_P0093099 Tcta protein_coding protein_coding MGP_WSBEiJ_T0015608.1 MGP_WSBEiJ_G0013738.1 mouse_genomes_project 9 96775719 96775924 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017970.1 MGP_WSBEiJ_G0015174.1 mouse_genomes_project 9 99221267 99227666 - Foxl2os processed_transcript lincRNA MGP_WSBEiJ_T0017971.1 MGP_WSBEiJ_G0015174.1 mouse_genomes_project 9 99226156 99226651 - Foxl2os processed_transcript retained_intron MGP_WSBEiJ_T0017972.1 MGP_WSBEiJ_G0015174.1 mouse_genomes_project 9 99226238 99227165 - Foxl2os processed_transcript retained_intron MGP_WSBEiJ_T0093960.1 MGP_WSBEiJ_G0034600.1 mouse_genomes_project 9 126058895 126082112 - MGP_WSBEiJ_P0093960 2010315B03Rik protein_coding protein_coding MGP_WSBEiJ_T0093961.1 MGP_WSBEiJ_G0034600.1 mouse_genomes_project 9 126060726 126082058 - MGP_WSBEiJ_P0093961 2010315B03Rik protein_coding protein_coding MGP_WSBEiJ_T0093962.1 MGP_WSBEiJ_G0034600.1 mouse_genomes_project 9 126060916 126081315 - MGP_WSBEiJ_P0093962 2010315B03Rik protein_coding protein_coding MGP_WSBEiJ_T0093963.1 MGP_WSBEiJ_G0034600.1 mouse_genomes_project 9 126060928 126082087 - MGP_WSBEiJ_P0093963 2010315B03Rik protein_coding protein_coding MGP_WSBEiJ_T0093964.1 MGP_WSBEiJ_G0034600.1 mouse_genomes_project 9 126067736 126082087 - 2010315B03Rik protein_coding processed_transcript MGP_WSBEiJ_T0005424.1 MGP_WSBEiJ_G0004576.1 mouse_genomes_project 9 96175230 96176702 - C78334 antisense antisense MGP_WSBEiJ_T0005425.1 MGP_WSBEiJ_G0004576.1 mouse_genomes_project 9 96175238 96181995 - C78334 antisense antisense MGP_WSBEiJ_T0099855.1 MGP_WSBEiJ_G0038518.1 mouse_genomes_project 9 59200171 59200294 + Gm22099 snoRNA snoRNA MGP_WSBEiJ_T0091636.1 MGP_WSBEiJ_G0034114.1 mouse_genomes_project 9 69476093 69681731 + MGP_WSBEiJ_P0091636 Myo1e protein_coding protein_coding MGP_WSBEiJ_T0090450.1 MGP_WSBEiJ_G0033735.1 mouse_genomes_project 9 36509956 36511007 + MGP_WSBEiJ_P0090450 Olfr926 protein_coding protein_coding MGP_WSBEiJ_T0015575.1 MGP_WSBEiJ_G0013705.1 mouse_genomes_project 9 83310093 83310499 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009078.1 MGP_WSBEiJ_G0007304.1 mouse_genomes_project 9 33570391 33597460 - lincRNA lincRNA MGP_WSBEiJ_T0009079.1 MGP_WSBEiJ_G0007304.1 mouse_genomes_project 9 33570432 33597512 - lincRNA lincRNA MGP_WSBEiJ_T0100159.1 MGP_WSBEiJ_G0038737.1 mouse_genomes_project 9 55490569 55491128 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0090948.1 MGP_WSBEiJ_G0033920.1 mouse_genomes_project 9 50366709 50386945 - MGP_WSBEiJ_P0090948 Fdx1 protein_coding protein_coding MGP_WSBEiJ_T0093458.1 MGP_WSBEiJ_G0034459.1 mouse_genomes_project 9 111382835 111432514 - MGP_WSBEiJ_P0093458 Klhl18 protein_coding protein_coding MGP_WSBEiJ_T0093459.1 MGP_WSBEiJ_G0034459.1 mouse_genomes_project 9 111382843 111432510 - MGP_WSBEiJ_P0093459 Klhl18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093460.1 MGP_WSBEiJ_G0034459.1 mouse_genomes_project 9 111382843 111432609 - MGP_WSBEiJ_P0093460 Klhl18 protein_coding protein_coding MGP_WSBEiJ_T0093461.1 MGP_WSBEiJ_G0034459.1 mouse_genomes_project 9 111387683 111389538 - Klhl18 protein_coding retained_intron MGP_WSBEiJ_T0093462.1 MGP_WSBEiJ_G0034459.1 mouse_genomes_project 9 111392910 111411017 - MGP_WSBEiJ_P0093462 Klhl18 protein_coding protein_coding MGP_WSBEiJ_T0093463.1 MGP_WSBEiJ_G0034459.1 mouse_genomes_project 9 111394129 111401154 - Klhl18 protein_coding retained_intron MGP_WSBEiJ_T0098602.1 MGP_WSBEiJ_G0037265.1 mouse_genomes_project 9 54086940 54087031 - Gm23407 snRNA snRNA MGP_WSBEiJ_T0009056.1 MGP_WSBEiJ_G0007283.1 mouse_genomes_project 9 9952739 9953142 - Gm29176 lincRNA lincRNA MGP_WSBEiJ_T0090498.1 MGP_WSBEiJ_G0033777.1 mouse_genomes_project 9 37941869 37943411 - MGP_WSBEiJ_P0090498 Olfr983 protein_coding protein_coding MGP_WSBEiJ_T0015637.1 MGP_WSBEiJ_G0013767.1 mouse_genomes_project 9 110313845 110315067 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009107.1 MGP_WSBEiJ_G0007327.1 mouse_genomes_project 9 61700347 61704310 + Gm26609 lincRNA lincRNA MGP_WSBEiJ_T0091350.1 MGP_WSBEiJ_G0034040.1 mouse_genomes_project 9 61686451 61707702 - MGP_WSBEiJ_P0091350 Fem1b protein_coding protein_coding MGP_WSBEiJ_T0090729.1 MGP_WSBEiJ_G0033853.1 mouse_genomes_project 9 43408262 43424825 - MGP_WSBEiJ_P0090729 Il10ra protein_coding protein_coding MGP_WSBEiJ_T0090730.1 MGP_WSBEiJ_G0033853.1 mouse_genomes_project 9 43408265 43424825 - MGP_WSBEiJ_P0090730 Il10ra protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090731.1 MGP_WSBEiJ_G0033853.1 mouse_genomes_project 9 43408953 43424822 - MGP_WSBEiJ_P0090731 Il10ra protein_coding protein_coding MGP_WSBEiJ_T0090112.1 MGP_WSBEiJ_G0033603.1 mouse_genomes_project 9 19269485 19303754 - MGP_WSBEiJ_P0090112 Zfp810 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091236.1 MGP_WSBEiJ_G0034012.1 mouse_genomes_project 9 57509600 57547724 + MGP_WSBEiJ_P0091236 Hcn4 protein_coding protein_coding MGP_WSBEiJ_T0002416.1 MGP_WSBEiJ_G0002332.1 mouse_genomes_project 9 109276722 109278656 + TEC TEC MGP_WSBEiJ_T0092416.1 MGP_WSBEiJ_G0034290.1 mouse_genomes_project 9 100196230 100198303 - MGP_WSBEiJ_P0092416 Sox14 protein_coding protein_coding MGP_WSBEiJ_T0092417.1 MGP_WSBEiJ_G0034290.1 mouse_genomes_project 9 100196344 100197789 - MGP_WSBEiJ_P0092417 Sox14 protein_coding protein_coding MGP_WSBEiJ_T0002342.1 MGP_WSBEiJ_G0002259.1 mouse_genomes_project 9 73294010 73297087 - TEC TEC MGP_WSBEiJ_T0093509.1 MGP_WSBEiJ_G0034466.1 mouse_genomes_project 9 111713037 111744695 + MGP_WSBEiJ_P0093509 Myl3 protein_coding protein_coding MGP_WSBEiJ_T0093510.1 MGP_WSBEiJ_G0034466.1 mouse_genomes_project 9 111736461 111745698 + MGP_WSBEiJ_P0093510 Myl3 protein_coding protein_coding MGP_WSBEiJ_T0093511.1 MGP_WSBEiJ_G0034466.1 mouse_genomes_project 9 111743974 111745339 + Myl3 protein_coding retained_intron MGP_WSBEiJ_T0093018.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108695152 108702340 + MGP_WSBEiJ_P0093018 Cdhr4 protein_coding protein_coding MGP_WSBEiJ_T0093019.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698345 108700718 + MGP_WSBEiJ_P0093019 Cdhr4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093020.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698381 108699230 + Cdhr4 protein_coding retained_intron MGP_WSBEiJ_T0093021.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698387 108702328 + Cdhr4 protein_coding retained_intron MGP_WSBEiJ_T0093022.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698411 108699014 + Cdhr4 protein_coding retained_intron MGP_WSBEiJ_T0093023.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698418 108702331 + Cdhr4 protein_coding retained_intron MGP_WSBEiJ_T0093024.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698438 108699586 + Cdhr4 protein_coding retained_intron MGP_WSBEiJ_T0093025.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698561 108700318 + Cdhr4 protein_coding processed_transcript MGP_WSBEiJ_T0093026.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698599 108702340 + MGP_WSBEiJ_P0093026 Cdhr4 protein_coding protein_coding MGP_WSBEiJ_T0093027.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108698653 108699813 + Cdhr4 protein_coding retained_intron MGP_WSBEiJ_T0093029.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108699271 108702335 + MGP_WSBEiJ_P0093029 Cdhr4 protein_coding protein_coding MGP_WSBEiJ_T0093030.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108700027 108702336 + MGP_WSBEiJ_P0093030 Cdhr4 protein_coding protein_coding MGP_WSBEiJ_T0093031.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108700248 108702333 + MGP_WSBEiJ_P0093031 Cdhr4 protein_coding protein_coding MGP_WSBEiJ_T0093032.1 MGP_WSBEiJ_G0034394.1 mouse_genomes_project 9 108700333 108702335 + MGP_WSBEiJ_P0093032 Cdhr4 protein_coding protein_coding MGP_WSBEiJ_T0091607.1 MGP_WSBEiJ_G0034109.1 mouse_genomes_project 9 68992431 68995694 - MGP_WSBEiJ_P0091607 Foxb1 protein_coding protein_coding MGP_WSBEiJ_T0090734.1 MGP_WSBEiJ_G0033856.1 mouse_genomes_project 9 43564849 43572008 + MGP_WSBEiJ_P0090734 Fxyd2 protein_coding protein_coding MGP_WSBEiJ_T0090735.1 MGP_WSBEiJ_G0033856.1 mouse_genomes_project 9 43567849 43572037 + MGP_WSBEiJ_P0090735 Fxyd2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092742.1 MGP_WSBEiJ_G0034350.1 mouse_genomes_project 9 107121107 107127084 + Rrp9 protein_coding processed_transcript MGP_WSBEiJ_T0092743.1 MGP_WSBEiJ_G0034350.1 mouse_genomes_project 9 107122413 107130634 + MGP_WSBEiJ_P0092743 Rrp9 protein_coding protein_coding MGP_WSBEiJ_T0092744.1 MGP_WSBEiJ_G0034350.1 mouse_genomes_project 9 107122462 107130626 + Rrp9 protein_coding retained_intron MGP_WSBEiJ_T0092745.1 MGP_WSBEiJ_G0034350.1 mouse_genomes_project 9 107122474 107123135 + Rrp9 protein_coding retained_intron MGP_WSBEiJ_T0092746.1 MGP_WSBEiJ_G0034350.1 mouse_genomes_project 9 107129063 107130632 + MGP_WSBEiJ_P0092746 Rrp9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092747.1 MGP_WSBEiJ_G0034350.1 mouse_genomes_project 9 107129673 107130634 + Rrp9 protein_coding retained_intron MGP_WSBEiJ_T0009117.1 MGP_WSBEiJ_G0007334.1 mouse_genomes_project 9 71788001 71788612 + Gm27255 lincRNA lincRNA MGP_WSBEiJ_T0090493.1 MGP_WSBEiJ_G0033772.1 mouse_genomes_project 9 37769087 37772653 - MGP_WSBEiJ_P0090493 protein_coding protein_coding MGP_WSBEiJ_T0009081.1 MGP_WSBEiJ_G0007306.1 mouse_genomes_project 9 38400346 38402822 + Gm17540 lincRNA lincRNA MGP_WSBEiJ_T0009089.1 MGP_WSBEiJ_G0007313.1 mouse_genomes_project 9 44531372 44536553 - lincRNA lincRNA MGP_WSBEiJ_T0090856.1 MGP_WSBEiJ_G0033899.1 mouse_genomes_project 9 48975047 48983815 - MGP_WSBEiJ_P0090856 Sdhd protein_coding protein_coding MGP_WSBEiJ_T0017973.1 MGP_WSBEiJ_G0015175.1 mouse_genomes_project 9 102191919 102280434 - Gm29521 processed_transcript lincRNA MGP_WSBEiJ_T0017974.1 MGP_WSBEiJ_G0015175.1 mouse_genomes_project 9 102277264 102280476 - Gm29521 processed_transcript retained_intron MGP_WSBEiJ_T0099842.1 MGP_WSBEiJ_G0038505.1 mouse_genomes_project 9 32535192 32535336 + Gm24262 snoRNA snoRNA MGP_WSBEiJ_T0090407.1 MGP_WSBEiJ_G0033699.1 mouse_genomes_project 9 35583017 35583965 + MGP_WSBEiJ_P0090407 Olfr881 protein_coding protein_coding MGP_WSBEiJ_T0097126.1 MGP_WSBEiJ_G0035807.1 mouse_genomes_project 9 64895918 64896031 + n-R5s85 rRNA rRNA MGP_WSBEiJ_T0092418.1 MGP_WSBEiJ_G0034291.1 mouse_genomes_project 9 100811216 100843753 - MGP_WSBEiJ_P0092418 Il20rb protein_coding protein_coding MGP_WSBEiJ_T0092419.1 MGP_WSBEiJ_G0034291.1 mouse_genomes_project 9 100811218 100821133 - Il20rb protein_coding retained_intron MGP_WSBEiJ_T0092420.1 MGP_WSBEiJ_G0034291.1 mouse_genomes_project 9 100811301 100815304 - Il20rb protein_coding processed_transcript MGP_WSBEiJ_T0092421.1 MGP_WSBEiJ_G0034291.1 mouse_genomes_project 9 100812058 100815276 - Il20rb protein_coding retained_intron MGP_WSBEiJ_T0092422.1 MGP_WSBEiJ_G0034291.1 mouse_genomes_project 9 100812604 100826927 - Il20rb protein_coding processed_transcript MGP_WSBEiJ_T0092423.1 MGP_WSBEiJ_G0034291.1 mouse_genomes_project 9 100819965 100843350 - Il20rb protein_coding retained_intron MGP_WSBEiJ_T0092193.1 MGP_WSBEiJ_G0034239.1 mouse_genomes_project 9 91382820 91391027 - MGP_WSBEiJ_P0092193 Zic1 protein_coding protein_coding MGP_WSBEiJ_T0092194.1 MGP_WSBEiJ_G0034239.1 mouse_genomes_project 9 91385263 91391069 - MGP_WSBEiJ_P0092194 Zic1 protein_coding protein_coding MGP_WSBEiJ_T0092195.1 MGP_WSBEiJ_G0034239.1 mouse_genomes_project 9 91386353 91387819 - Zic1 protein_coding processed_transcript MGP_WSBEiJ_T0091578.1 MGP_WSBEiJ_G0034102.1 mouse_genomes_project 9 66345270 66530241 - MGP_WSBEiJ_P0091578 Tln2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091579.1 MGP_WSBEiJ_G0034102.1 mouse_genomes_project 9 66345278 66694107 - MGP_WSBEiJ_P0091579 Tln2 protein_coding protein_coding MGP_WSBEiJ_T0091580.1 MGP_WSBEiJ_G0034102.1 mouse_genomes_project 9 66349328 66673589 - MGP_WSBEiJ_P0091580 Tln2 protein_coding protein_coding MGP_WSBEiJ_T0005358.1 MGP_WSBEiJ_G0004536.1 mouse_genomes_project 9 44045794 44047383 - Gm16536 antisense antisense MGP_WSBEiJ_T0015613.1 MGP_WSBEiJ_G0013743.1 mouse_genomes_project 9 97459086 97459369 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092208.1 MGP_WSBEiJ_G0034241.1 mouse_genomes_project 9 92255328 92281625 + MGP_WSBEiJ_P0092208 Plscr5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099887.1 MGP_WSBEiJ_G0038550.1 mouse_genomes_project 9 108690103 108690231 + Gm24944 snoRNA snoRNA MGP_WSBEiJ_T0090445.1 MGP_WSBEiJ_G0033730.1 mouse_genomes_project 9 36377118 36381171 + MGP_WSBEiJ_P0090445 Olfr920 protein_coding protein_coding MGP_WSBEiJ_T0096868.1 MGP_WSBEiJ_G0035549.1 mouse_genomes_project 9 36144171 36145106 + pseudogene pseudogene MGP_WSBEiJ_T0097481.1 MGP_WSBEiJ_G0036149.1 mouse_genomes_project 9 102580245 102582723 - Gm29388 sense_intronic sense_intronic MGP_WSBEiJ_T0010918.1 MGP_WSBEiJ_G0009075.1 mouse_genomes_project 9 116711869 116711992 + Mir467h miRNA miRNA MGP_WSBEiJ_T0096866.1 MGP_WSBEiJ_G0035547.1 mouse_genomes_project 9 16003836 16004785 + pseudogene pseudogene MGP_WSBEiJ_T0015585.1 MGP_WSBEiJ_G0013715.1 mouse_genomes_project 9 88078741 88079327 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099829.1 MGP_WSBEiJ_G0038492.1 mouse_genomes_project 9 12124568 12124642 + Gm24357 snoRNA snoRNA MGP_WSBEiJ_T0089948.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17480166 17500046 - MGP_WSBEiJ_P0089948 Fbxl12 protein_coding protein_coding MGP_WSBEiJ_T0089949.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17480278 17502489 - Fbxl12 protein_coding processed_transcript MGP_WSBEiJ_T0089950.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17494537 17502501 - MGP_WSBEiJ_P0089950 Fbxl12 protein_coding protein_coding MGP_WSBEiJ_T0089951.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17494574 17496130 - MGP_WSBEiJ_P0089951 Fbxl12 protein_coding protein_coding MGP_WSBEiJ_T0089952.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17494574 17502489 - MGP_WSBEiJ_P0089952 Fbxl12 protein_coding protein_coding MGP_WSBEiJ_T0089953.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17494575 17502501 - MGP_WSBEiJ_P0089953 Fbxl12 protein_coding protein_coding MGP_WSBEiJ_T0089954.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17494577 17502513 - MGP_WSBEiJ_P0089954 Fbxl12 protein_coding protein_coding MGP_WSBEiJ_T0089955.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17494577 17500539 - MGP_WSBEiJ_P0089955 Fbxl12 protein_coding protein_coding MGP_WSBEiJ_T0089956.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17495590 17502504 - MGP_WSBEiJ_P0089956 Fbxl12 protein_coding protein_coding MGP_WSBEiJ_T0089957.1 MGP_WSBEiJ_G0033541.1 mouse_genomes_project 9 17499295 17502484 - Fbxl12 protein_coding retained_intron MGP_WSBEiJ_T0005452.1 MGP_WSBEiJ_G0004597.1 mouse_genomes_project 9 107971117 107972576 - Gm17041 antisense antisense MGP_WSBEiJ_T0092969.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108465687 108574258 - MGP_WSBEiJ_P0092969 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092970.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108465717 108574217 - MGP_WSBEiJ_P0092970 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092971.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108470228 108472738 - protein_coding retained_intron MGP_WSBEiJ_T0092972.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108481417 108484909 - protein_coding retained_intron MGP_WSBEiJ_T0092973.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108481650 108486404 - MGP_WSBEiJ_P0092973 protein_coding protein_coding MGP_WSBEiJ_T0092974.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108486412 108574187 - MGP_WSBEiJ_P0092974 protein_coding protein_coding MGP_WSBEiJ_T0092975.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108496595 108574189 - protein_coding processed_transcript MGP_WSBEiJ_T0092976.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108507963 108544655 - protein_coding processed_transcript MGP_WSBEiJ_T0092977.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108558994 108574176 - protein_coding retained_intron MGP_WSBEiJ_T0092978.1 MGP_WSBEiJ_G0034385.1 mouse_genomes_project 9 108570293 108574691 - protein_coding retained_intron MGP_WSBEiJ_T0092148.1 MGP_WSBEiJ_G0034229.1 mouse_genomes_project 9 89143991 89149670 + MGP_WSBEiJ_P0092148 protein_coding protein_coding MGP_WSBEiJ_T0009205.1 MGP_WSBEiJ_G0007404.1 mouse_genomes_project 9 124316820 124420993 + 9530059O14Rik lincRNA lincRNA MGP_WSBEiJ_T0009206.1 MGP_WSBEiJ_G0007404.1 mouse_genomes_project 9 124316824 124324842 + 9530059O14Rik lincRNA lincRNA MGP_WSBEiJ_T0009207.1 MGP_WSBEiJ_G0007404.1 mouse_genomes_project 9 124316825 124421624 + 9530059O14Rik lincRNA lincRNA MGP_WSBEiJ_T0090464.1 MGP_WSBEiJ_G0033749.1 mouse_genomes_project 9 37048910 37049876 - MGP_WSBEiJ_P0090464 Olfr948 protein_coding protein_coding MGP_WSBEiJ_T0005364.1 MGP_WSBEiJ_G0004540.1 mouse_genomes_project 9 50252106 50294189 - Arhgap20os antisense antisense MGP_WSBEiJ_T0005365.1 MGP_WSBEiJ_G0004540.1 mouse_genomes_project 9 50258798 50294100 - Arhgap20os antisense antisense MGP_WSBEiJ_T0005366.1 MGP_WSBEiJ_G0004540.1 mouse_genomes_project 9 50258806 50294188 - Arhgap20os antisense antisense MGP_WSBEiJ_T0005367.1 MGP_WSBEiJ_G0004540.1 mouse_genomes_project 9 50259663 50294085 - Arhgap20os antisense antisense MGP_WSBEiJ_T0090013.1 MGP_WSBEiJ_G0033566.1 mouse_genomes_project 9 18169608 18188705 - MGP_WSBEiJ_P0090013 Kri1 protein_coding protein_coding MGP_WSBEiJ_T0090014.1 MGP_WSBEiJ_G0033566.1 mouse_genomes_project 9 18169787 18188689 - MGP_WSBEiJ_P0090014 Kri1 protein_coding protein_coding MGP_WSBEiJ_T0090015.1 MGP_WSBEiJ_G0033566.1 mouse_genomes_project 9 18170019 18171545 - Kri1 protein_coding retained_intron MGP_WSBEiJ_T0090016.1 MGP_WSBEiJ_G0033566.1 mouse_genomes_project 9 18170072 18188689 - MGP_WSBEiJ_P0090016 Kri1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090017.1 MGP_WSBEiJ_G0033566.1 mouse_genomes_project 9 18176658 18188705 - Kri1 protein_coding retained_intron MGP_WSBEiJ_T0090018.1 MGP_WSBEiJ_G0033566.1 mouse_genomes_project 9 18179427 18188692 - Kri1 protein_coding retained_intron MGP_WSBEiJ_T0090019.1 MGP_WSBEiJ_G0033566.1 mouse_genomes_project 9 18180387 18188705 - Kri1 protein_coding retained_intron MGP_WSBEiJ_T0090020.1 MGP_WSBEiJ_G0033566.1 mouse_genomes_project 9 18188260 18188692 - Kri1 protein_coding retained_intron MGP_WSBEiJ_T0015522.1 MGP_WSBEiJ_G0013652.1 mouse_genomes_project 9 35253605 35254600 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093697.1 MGP_WSBEiJ_G0034514.1 mouse_genomes_project 9 119976129 119983274 + MGP_WSBEiJ_P0093697 Eomes protein_coding protein_coding MGP_WSBEiJ_T0093698.1 MGP_WSBEiJ_G0034514.1 mouse_genomes_project 9 119976261 119984041 + MGP_WSBEiJ_P0093698 Eomes protein_coding protein_coding MGP_WSBEiJ_T0093699.1 MGP_WSBEiJ_G0034514.1 mouse_genomes_project 9 119976770 119980666 + MGP_WSBEiJ_P0093699 Eomes protein_coding protein_coding MGP_WSBEiJ_T0017910.1 MGP_WSBEiJ_G0015154.1 mouse_genomes_project 9 38680115 38683471 - Gm16096 processed_transcript processed_transcript MGP_WSBEiJ_T0017911.1 MGP_WSBEiJ_G0015154.1 mouse_genomes_project 9 38680121 38682760 - Gm16096 processed_transcript processed_transcript MGP_WSBEiJ_T0005399.1 MGP_WSBEiJ_G0004562.1 mouse_genomes_project 9 75857129 75858399 + Gm27234 antisense antisense MGP_WSBEiJ_T0009173.1 MGP_WSBEiJ_G0007380.1 mouse_genomes_project 9 104409008 104450420 - Gm29154 lincRNA lincRNA MGP_WSBEiJ_T0009174.1 MGP_WSBEiJ_G0007380.1 mouse_genomes_project 9 104409111 104449720 - Gm29154 lincRNA lincRNA MGP_WSBEiJ_T0099883.1 MGP_WSBEiJ_G0038546.1 mouse_genomes_project 9 101795918 101796050 - Gm24638 snoRNA snoRNA MGP_WSBEiJ_T0092642.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106219238 106276124 + MGP_WSBEiJ_P0092642 Pik3r4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092643.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106219249 106266909 + Pik3r4 protein_coding retained_intron MGP_WSBEiJ_T0092644.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106219252 106221025 + MGP_WSBEiJ_P0092644 Pik3r4 protein_coding protein_coding MGP_WSBEiJ_T0092645.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106219279 106237756 + Pik3r4 protein_coding retained_intron MGP_WSBEiJ_T0092646.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106219286 106245901 + Pik3r4 protein_coding retained_intron MGP_WSBEiJ_T0092647.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106219301 106276020 + MGP_WSBEiJ_P0092647 Pik3r4 protein_coding protein_coding MGP_WSBEiJ_T0092648.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106219435 106276145 + MGP_WSBEiJ_P0092648 Pik3r4 protein_coding protein_coding MGP_WSBEiJ_T0092649.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106219466 106225071 + MGP_WSBEiJ_P0092649 Pik3r4 protein_coding protein_coding MGP_WSBEiJ_T0092650.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106240469 106251094 + MGP_WSBEiJ_P0092650 Pik3r4 protein_coding protein_coding MGP_WSBEiJ_T0092651.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106243237 106245441 + Pik3r4 protein_coding retained_intron MGP_WSBEiJ_T0092652.1 MGP_WSBEiJ_G0034331.1 mouse_genomes_project 9 106269305 106274883 + Pik3r4 protein_coding retained_intron MGP_WSBEiJ_T0092848.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108235251 108245947 + MGP_WSBEiJ_P0092848 Rassf1 protein_coding protein_coding MGP_WSBEiJ_T0092849.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108235258 108238203 + Rassf1 protein_coding retained_intron MGP_WSBEiJ_T0092850.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108235263 108245943 + MGP_WSBEiJ_P0092850 Rassf1 protein_coding protein_coding MGP_WSBEiJ_T0092851.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108235286 108245943 + MGP_WSBEiJ_P0092851 Rassf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092852.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108238279 108245943 + MGP_WSBEiJ_P0092852 Rassf1 protein_coding protein_coding MGP_WSBEiJ_T0092853.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108239072 108241492 + Rassf1 protein_coding processed_transcript MGP_WSBEiJ_T0092854.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108240302 108245943 + Rassf1 protein_coding processed_transcript MGP_WSBEiJ_T0092855.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108240434 108245943 + Rassf1 protein_coding retained_intron MGP_WSBEiJ_T0092856.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108241626 108245511 + Rassf1 protein_coding retained_intron MGP_WSBEiJ_T0092857.1 MGP_WSBEiJ_G0034372.1 mouse_genomes_project 9 108241633 108244107 + Rassf1 protein_coding retained_intron MGP_WSBEiJ_T0015600.1 MGP_WSBEiJ_G0013730.1 mouse_genomes_project 9 94489997 94490571 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092904.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108299031 108321261 - MGP_WSBEiJ_P0092904 Gnai2 protein_coding protein_coding MGP_WSBEiJ_T0092905.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108299031 108321206 - MGP_WSBEiJ_P0092905 Gnai2 protein_coding protein_coding MGP_WSBEiJ_T0092906.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108299846 108300954 - Gnai2 protein_coding retained_intron MGP_WSBEiJ_T0092907.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108300562 108301418 - Gnai2 protein_coding retained_intron MGP_WSBEiJ_T0092908.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108301131 108302285 - Gnai2 protein_coding retained_intron MGP_WSBEiJ_T0092909.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108301406 108312042 - MGP_WSBEiJ_P0092909 Gnai2 protein_coding protein_coding MGP_WSBEiJ_T0092910.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108304377 108321228 - Gnai2 protein_coding retained_intron MGP_WSBEiJ_T0092911.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108304813 108305746 - Gnai2 protein_coding retained_intron MGP_WSBEiJ_T0092912.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108304935 108321231 - MGP_WSBEiJ_P0092912 Gnai2 protein_coding protein_coding MGP_WSBEiJ_T0092913.1 MGP_WSBEiJ_G0034380.1 mouse_genomes_project 9 108320993 108321237 - MGP_WSBEiJ_P0092913 Gnai2 protein_coding protein_coding MGP_WSBEiJ_T0089922.1 MGP_WSBEiJ_G0033536.1 mouse_genomes_project 9 17203022 17233325 - MGP_WSBEiJ_P0089922 Zfp560 protein_coding protein_coding MGP_WSBEiJ_T0089923.1 MGP_WSBEiJ_G0033536.1 mouse_genomes_project 9 17210898 17233325 - Zfp560 protein_coding retained_intron MGP_WSBEiJ_T0092453.1 MGP_WSBEiJ_G0034296.1 mouse_genomes_project 9 101477598 101504382 + MGP_WSBEiJ_P0092453 Msl2 protein_coding protein_coding MGP_WSBEiJ_T0092454.1 MGP_WSBEiJ_G0034296.1 mouse_genomes_project 9 101478255 101507952 + MGP_WSBEiJ_P0092454 Msl2 protein_coding protein_coding MGP_WSBEiJ_T0100156.1 MGP_WSBEiJ_G0038735.1 mouse_genomes_project 9 11626431 11627478 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0089995.1 MGP_WSBEiJ_G0033558.1 mouse_genomes_project 9 17956647 17962608 - MGP_WSBEiJ_P0089995 Fdx1l protein_coding protein_coding MGP_WSBEiJ_T0092342.1 MGP_WSBEiJ_G0034268.1 mouse_genomes_project 9 98529306 98649966 + MGP_WSBEiJ_P0092342 Nmnat3 protein_coding protein_coding MGP_WSBEiJ_T0092343.1 MGP_WSBEiJ_G0034268.1 mouse_genomes_project 9 98529326 98613343 + Nmnat3 protein_coding processed_transcript MGP_WSBEiJ_T0092344.1 MGP_WSBEiJ_G0034268.1 mouse_genomes_project 9 98538480 98598153 + Nmnat3 protein_coding retained_intron MGP_WSBEiJ_T0092345.1 MGP_WSBEiJ_G0034268.1 mouse_genomes_project 9 98538480 98671820 + MGP_WSBEiJ_P0092345 Nmnat3 protein_coding protein_coding MGP_WSBEiJ_T0092346.1 MGP_WSBEiJ_G0034268.1 mouse_genomes_project 9 98596451 98662855 + MGP_WSBEiJ_P0092346 Nmnat3 protein_coding protein_coding MGP_WSBEiJ_T0097483.1 MGP_WSBEiJ_G0036151.1 mouse_genomes_project 9 109330408 109330890 - Gm38163 sense_intronic sense_intronic MGP_WSBEiJ_T0097127.1 MGP_WSBEiJ_G0035808.1 mouse_genomes_project 9 73503657 73503776 + n-R5s86 rRNA rRNA MGP_WSBEiJ_T0009140.1 MGP_WSBEiJ_G0007354.1 mouse_genomes_project 9 89756782 89759982 + 1700017I07Rik lincRNA lincRNA MGP_WSBEiJ_T0091755.1 MGP_WSBEiJ_G0034135.1 mouse_genomes_project 9 72349551 72377416 + MGP_WSBEiJ_P0091755 Pygo1 protein_coding protein_coding MGP_WSBEiJ_T0093359.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742063 110752470 + MGP_WSBEiJ_P0093359 Nme6 protein_coding protein_coding MGP_WSBEiJ_T0093360.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742072 110752915 + MGP_WSBEiJ_P0093360 Nme6 protein_coding protein_coding MGP_WSBEiJ_T0093361.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742085 110742904 + Nme6 protein_coding retained_intron MGP_WSBEiJ_T0093362.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742085 110752816 + Nme6 protein_coding processed_transcript MGP_WSBEiJ_T0093363.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742095 110751980 + MGP_WSBEiJ_P0093363 Nme6 protein_coding protein_coding MGP_WSBEiJ_T0093364.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742100 110752600 + Nme6 protein_coding processed_transcript MGP_WSBEiJ_T0093365.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742101 110752897 + Nme6 protein_coding processed_transcript MGP_WSBEiJ_T0093366.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742121 110744940 + Nme6 protein_coding retained_intron MGP_WSBEiJ_T0093367.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742200 110752527 + MGP_WSBEiJ_P0093367 Nme6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093368.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742344 110752665 + MGP_WSBEiJ_P0093368 Nme6 protein_coding protein_coding MGP_WSBEiJ_T0093369.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742356 110752602 + MGP_WSBEiJ_P0093369 Nme6 protein_coding protein_coding MGP_WSBEiJ_T0093370.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742361 110752521 + Nme6 protein_coding processed_transcript MGP_WSBEiJ_T0093371.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742505 110751567 + Nme6 protein_coding retained_intron MGP_WSBEiJ_T0093372.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742507 110752488 + Nme6 protein_coding processed_transcript MGP_WSBEiJ_T0093373.1 MGP_WSBEiJ_G0034448.1 mouse_genomes_project 9 110742605 110753057 + Nme6 protein_coding processed_transcript MGP_WSBEiJ_T0093830.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123413818 123438144 + MGP_WSBEiJ_P0093830 Nktr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093831.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123413825 123452267 + MGP_WSBEiJ_P0093831 Nktr protein_coding protein_coding MGP_WSBEiJ_T0093832.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123413827 123438062 + MGP_WSBEiJ_P0093832 Nktr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093833.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123413864 123436578 + MGP_WSBEiJ_P0093833 Nktr protein_coding protein_coding MGP_WSBEiJ_T0093834.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123413866 123425532 + Nktr protein_coding retained_intron MGP_WSBEiJ_T0093835.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123413892 123430964 + Nktr protein_coding retained_intron MGP_WSBEiJ_T0093836.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123413947 123414736 + Nktr protein_coding processed_transcript MGP_WSBEiJ_T0093837.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123414137 123443617 + MGP_WSBEiJ_P0093837 Nktr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093838.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123414171 123445264 + MGP_WSBEiJ_P0093838 Nktr protein_coding protein_coding MGP_WSBEiJ_T0093839.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123414554 123427033 + MGP_WSBEiJ_P0093839 Nktr protein_coding protein_coding MGP_WSBEiJ_T0093840.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123424916 123427101 + Nktr protein_coding retained_intron MGP_WSBEiJ_T0093841.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123426664 123438098 + Nktr protein_coding retained_intron MGP_WSBEiJ_T0093842.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123446209 123449820 + MGP_WSBEiJ_P0093842 Nktr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093843.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123446638 123448071 + Nktr protein_coding retained_intron MGP_WSBEiJ_T0093844.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123447090 123450281 + MGP_WSBEiJ_P0093844 Nktr protein_coding protein_coding MGP_WSBEiJ_T0093845.1 MGP_WSBEiJ_G0034556.1 mouse_genomes_project 9 123447950 123449780 + Nktr protein_coding retained_intron MGP_WSBEiJ_T0009192.1 MGP_WSBEiJ_G0007394.1 mouse_genomes_project 9 113295953 113297696 + 2900079G21Rik lincRNA lincRNA MGP_WSBEiJ_T0009193.1 MGP_WSBEiJ_G0007394.1 mouse_genomes_project 9 113295970 113348887 + 2900079G21Rik lincRNA lincRNA MGP_WSBEiJ_T0009194.1 MGP_WSBEiJ_G0007394.1 mouse_genomes_project 9 113296058 113297694 + 2900079G21Rik lincRNA lincRNA MGP_WSBEiJ_T0009195.1 MGP_WSBEiJ_G0007394.1 mouse_genomes_project 9 113320852 113412022 + 2900079G21Rik lincRNA lincRNA MGP_WSBEiJ_T0009090.1 MGP_WSBEiJ_G0007314.1 mouse_genomes_project 9 45157858 45171620 + 2900052N01Rik lincRNA lincRNA MGP_WSBEiJ_T0009091.1 MGP_WSBEiJ_G0007314.1 mouse_genomes_project 9 45157968 45171620 + 2900052N01Rik lincRNA lincRNA MGP_WSBEiJ_T0009092.1 MGP_WSBEiJ_G0007314.1 mouse_genomes_project 9 45157992 45166803 + 2900052N01Rik lincRNA lincRNA MGP_WSBEiJ_T0015569.1 MGP_WSBEiJ_G0013699.1 mouse_genomes_project 9 80709609 80711702 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091219.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270243 57343067 + MGP_WSBEiJ_P0091219 Nptn protein_coding protein_coding MGP_WSBEiJ_T0091220.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270295 57344629 + MGP_WSBEiJ_P0091220 Nptn protein_coding protein_coding MGP_WSBEiJ_T0091221.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270377 57331238 + MGP_WSBEiJ_P0091221 Nptn protein_coding non_stop_decay MGP_WSBEiJ_T0091222.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270409 57344629 + MGP_WSBEiJ_P0091222 Nptn protein_coding protein_coding MGP_WSBEiJ_T0091223.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270410 57335550 + MGP_WSBEiJ_P0091223 Nptn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091224.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270410 57343067 + MGP_WSBEiJ_P0091224 Nptn protein_coding protein_coding MGP_WSBEiJ_T0091225.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270439 57343067 + MGP_WSBEiJ_P0091225 Nptn protein_coding protein_coding MGP_WSBEiJ_T0091226.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270444 57343711 + MGP_WSBEiJ_P0091226 Nptn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091227.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57270447 57335412 + Nptn protein_coding processed_transcript MGP_WSBEiJ_T0091228.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57319660 57349707 + MGP_WSBEiJ_P0091228 Nptn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091229.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57319661 57346956 + MGP_WSBEiJ_P0091229 Nptn protein_coding protein_coding MGP_WSBEiJ_T0091230.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57341947 57343806 + Nptn protein_coding retained_intron MGP_WSBEiJ_T0091231.1 MGP_WSBEiJ_G0034010.1 mouse_genomes_project 9 57343724 57344569 + Nptn protein_coding processed_transcript MGP_WSBEiJ_T0099867.1 MGP_WSBEiJ_G0038530.1 mouse_genomes_project 9 73232868 73232998 - Gm25105 snoRNA snoRNA MGP_WSBEiJ_T0090949.1 MGP_WSBEiJ_G0033921.1 mouse_genomes_project 9 50474926 50517398 + MGP_WSBEiJ_P0090949 Rdx protein_coding protein_coding MGP_WSBEiJ_T0090950.1 MGP_WSBEiJ_G0033921.1 mouse_genomes_project 9 50475715 50517398 + MGP_WSBEiJ_P0090950 Rdx protein_coding protein_coding MGP_WSBEiJ_T0090951.1 MGP_WSBEiJ_G0033921.1 mouse_genomes_project 9 50475715 50503638 + MGP_WSBEiJ_P0090951 Rdx protein_coding protein_coding MGP_WSBEiJ_T0090952.1 MGP_WSBEiJ_G0033921.1 mouse_genomes_project 9 50509347 50517398 + MGP_WSBEiJ_P0090952 Rdx protein_coding unknown_likely_coding MGP_WSBEiJ_T0097135.1 MGP_WSBEiJ_G0035816.1 mouse_genomes_project 9 116974862 116974981 - n-R5s92 rRNA rRNA MGP_WSBEiJ_T0015606.1 MGP_WSBEiJ_G0013736.1 mouse_genomes_project 9 96439227 96439468 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097121.1 MGP_WSBEiJ_G0035802.1 mouse_genomes_project 9 32900819 32900927 - Gm24188 rRNA rRNA MGP_WSBEiJ_T0090466.1 MGP_WSBEiJ_G0033751.1 mouse_genomes_project 9 37152426 37156083 - MGP_WSBEiJ_P0090466 Olfr955 protein_coding protein_coding MGP_WSBEiJ_T0005485.1 MGP_WSBEiJ_G0004623.1 mouse_genomes_project 9 125410651 125412589 + Gm17120 antisense antisense MGP_WSBEiJ_T0091416.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63361680 63683642 + MGP_WSBEiJ_P0091416 Megf11 protein_coding protein_coding MGP_WSBEiJ_T0091417.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63361680 63691908 + MGP_WSBEiJ_P0091417 Megf11 protein_coding protein_coding MGP_WSBEiJ_T0091418.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63361680 63689993 + MGP_WSBEiJ_P0091418 Megf11 protein_coding protein_coding MGP_WSBEiJ_T0091419.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63361737 63632758 + Megf11 protein_coding retained_intron MGP_WSBEiJ_T0091420.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63361740 63691908 + MGP_WSBEiJ_P0091420 Megf11 protein_coding protein_coding MGP_WSBEiJ_T0091421.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63477359 63485098 + Megf11 protein_coding processed_transcript MGP_WSBEiJ_T0091422.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63477624 63670416 + Megf11 protein_coding retained_intron MGP_WSBEiJ_T0091423.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63522946 63621349 + Megf11 protein_coding processed_transcript MGP_WSBEiJ_T0091424.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63643334 63675068 + MGP_WSBEiJ_P0091424 Megf11 protein_coding protein_coding MGP_WSBEiJ_T0091425.1 MGP_WSBEiJ_G0034059.1 mouse_genomes_project 9 63676443 63688636 + Megf11 protein_coding processed_transcript MGP_WSBEiJ_T0090458.1 MGP_WSBEiJ_G0033743.1 mouse_genomes_project 9 36717696 36718856 - MGP_WSBEiJ_P0090458 Olfr938 protein_coding protein_coding MGP_WSBEiJ_T0092762.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107317075 107345396 - MGP_WSBEiJ_P0092762 Tex264 protein_coding protein_coding MGP_WSBEiJ_T0092763.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107317075 107345255 - MGP_WSBEiJ_P0092763 Tex264 protein_coding protein_coding MGP_WSBEiJ_T0092764.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107317081 107345488 - MGP_WSBEiJ_P0092764 Tex264 protein_coding protein_coding MGP_WSBEiJ_T0092765.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107317321 107322460 - Tex264 protein_coding processed_transcript MGP_WSBEiJ_T0092766.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107317377 107345492 - Tex264 protein_coding processed_transcript MGP_WSBEiJ_T0092767.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107317566 107345500 - Tex264 protein_coding processed_transcript MGP_WSBEiJ_T0092768.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107320889 107345482 - Tex264 protein_coding processed_transcript MGP_WSBEiJ_T0092769.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107337766 107344878 - Tex264 protein_coding processed_transcript MGP_WSBEiJ_T0092770.1 MGP_WSBEiJ_G0034357.1 mouse_genomes_project 9 107344508 107345476 - Tex264 protein_coding processed_transcript MGP_WSBEiJ_T0093670.1 MGP_WSBEiJ_G0034508.1 mouse_genomes_project 9 117296007 117448916 + MGP_WSBEiJ_P0093670 Gadl1 protein_coding protein_coding MGP_WSBEiJ_T0090238.1 MGP_WSBEiJ_G0033645.1 mouse_genomes_project 9 29994560 30095117 + Ets1 protein_coding retained_intron MGP_WSBEiJ_T0090239.1 MGP_WSBEiJ_G0033645.1 mouse_genomes_project 9 29994578 30011012 + Ets1 protein_coding retained_intron MGP_WSBEiJ_T0090240.1 MGP_WSBEiJ_G0033645.1 mouse_genomes_project 9 30060028 30121570 + MGP_WSBEiJ_P0090240 Ets1 protein_coding protein_coding MGP_WSBEiJ_T0090241.1 MGP_WSBEiJ_G0033645.1 mouse_genomes_project 9 30060363 30124393 + MGP_WSBEiJ_P0090241 Ets1 protein_coding protein_coding MGP_WSBEiJ_T0090242.1 MGP_WSBEiJ_G0033645.1 mouse_genomes_project 9 30060363 30120994 + MGP_WSBEiJ_P0090242 Ets1 protein_coding protein_coding MGP_WSBEiJ_T0093771.1 MGP_WSBEiJ_G0034540.1 mouse_genomes_project 9 121709088 121723227 + MGP_WSBEiJ_P0093771 Slc25a38 protein_coding protein_coding MGP_WSBEiJ_T0093772.1 MGP_WSBEiJ_G0034540.1 mouse_genomes_project 9 121709119 121719386 + MGP_WSBEiJ_P0093772 Slc25a38 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093773.1 MGP_WSBEiJ_G0034540.1 mouse_genomes_project 9 121709122 121719015 + Slc25a38 protein_coding processed_transcript MGP_WSBEiJ_T0093774.1 MGP_WSBEiJ_G0034540.1 mouse_genomes_project 9 121709122 121710312 + Slc25a38 protein_coding processed_transcript MGP_WSBEiJ_T0093775.1 MGP_WSBEiJ_G0034540.1 mouse_genomes_project 9 121709138 121722374 + MGP_WSBEiJ_P0093775 Slc25a38 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093776.1 MGP_WSBEiJ_G0034540.1 mouse_genomes_project 9 121713573 121720905 + MGP_WSBEiJ_P0093776 Slc25a38 protein_coding protein_coding MGP_WSBEiJ_T0093777.1 MGP_WSBEiJ_G0034540.1 mouse_genomes_project 9 121713712 121718990 + Slc25a38 protein_coding processed_transcript MGP_WSBEiJ_T0089718.1 MGP_WSBEiJ_G0033447.1 mouse_genomes_project 9 4278185 4290321 + MGP_WSBEiJ_P0089718 Mmp3 protein_coding protein_coding MGP_WSBEiJ_T0099847.1 MGP_WSBEiJ_G0038510.1 mouse_genomes_project 9 38707582 38707668 + Snord14d snoRNA snoRNA MGP_WSBEiJ_T0093915.1 MGP_WSBEiJ_G0034584.1 mouse_genomes_project 9 125020351 125022084 - MGP_WSBEiJ_P0093915 Tmem158 protein_coding protein_coding MGP_WSBEiJ_T0089760.1 MGP_WSBEiJ_G0033463.1 mouse_genomes_project 9 5801042 5805023 + MGP_WSBEiJ_P0089760 Gm16485 protein_coding protein_coding MGP_WSBEiJ_T0010915.1 MGP_WSBEiJ_G0009072.1 mouse_genomes_project 9 111602438 111602555 - Mir8107 miRNA miRNA MGP_WSBEiJ_T0090456.1 MGP_WSBEiJ_G0033741.1 mouse_genomes_project 9 36679430 36685758 - MGP_WSBEiJ_P0090456 Olfr936 protein_coding protein_coding MGP_WSBEiJ_T0090063.1 MGP_WSBEiJ_G0033578.1 mouse_genomes_project 9 18547192 18645210 + MGP_WSBEiJ_P0090063 Smarca4 protein_coding protein_coding MGP_WSBEiJ_T0090064.1 MGP_WSBEiJ_G0033578.1 mouse_genomes_project 9 18547192 18645197 + MGP_WSBEiJ_P0090064 Smarca4 protein_coding protein_coding MGP_WSBEiJ_T0090065.1 MGP_WSBEiJ_G0033578.1 mouse_genomes_project 9 18547976 18644351 + MGP_WSBEiJ_P0090065 Smarca4 protein_coding protein_coding MGP_WSBEiJ_T0090066.1 MGP_WSBEiJ_G0033578.1 mouse_genomes_project 9 18568863 18622026 + MGP_WSBEiJ_P0090066 Smarca4 protein_coding protein_coding MGP_WSBEiJ_T0089924.1 MGP_WSBEiJ_G0033537.1 mouse_genomes_project 9 17281189 17311207 - MGP_WSBEiJ_P0089924 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089925.1 MGP_WSBEiJ_G0033537.1 mouse_genomes_project 9 17284915 17311195 - protein_coding retained_intron MGP_WSBEiJ_T0089926.1 MGP_WSBEiJ_G0033537.1 mouse_genomes_project 9 17286947 17311227 - protein_coding retained_intron MGP_WSBEiJ_T0089927.1 MGP_WSBEiJ_G0033537.1 mouse_genomes_project 9 17288184 17291254 - protein_coding processed_transcript MGP_WSBEiJ_T0089928.1 MGP_WSBEiJ_G0033537.1 mouse_genomes_project 9 17291907 17311400 - protein_coding retained_intron MGP_WSBEiJ_T0089929.1 MGP_WSBEiJ_G0033537.1 mouse_genomes_project 9 17294195 17311065 - MGP_WSBEiJ_P0089929 protein_coding protein_coding MGP_WSBEiJ_T0100162.1 MGP_WSBEiJ_G0038739.1 mouse_genomes_project 9 78123642 78125999 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100163.1 MGP_WSBEiJ_G0038739.1 mouse_genomes_project 9 78124494 78126573 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100164.1 MGP_WSBEiJ_G0038739.1 mouse_genomes_project 9 78125045 78128057 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0091150.1 MGP_WSBEiJ_G0033992.1 mouse_genomes_project 9 56291449 56298171 - MGP_WSBEiJ_P0091150 Cyp1a2 protein_coding protein_coding MGP_WSBEiJ_T0091944.1 MGP_WSBEiJ_G0034190.1 mouse_genomes_project 9 79344072 79471371 - MGP_WSBEiJ_P0091944 Col12a1 protein_coding protein_coding MGP_WSBEiJ_T0091945.1 MGP_WSBEiJ_G0034190.1 mouse_genomes_project 9 79344072 79359437 - MGP_WSBEiJ_P0091945 Col12a1 protein_coding protein_coding MGP_WSBEiJ_T0091946.1 MGP_WSBEiJ_G0034190.1 mouse_genomes_project 9 79346899 79471573 - MGP_WSBEiJ_P0091946 Col12a1 protein_coding protein_coding MGP_WSBEiJ_T0091947.1 MGP_WSBEiJ_G0034190.1 mouse_genomes_project 9 79443739 79471573 - Col12a1 protein_coding retained_intron MGP_WSBEiJ_T0091948.1 MGP_WSBEiJ_G0034190.1 mouse_genomes_project 9 79465183 79471684 - Col12a1 protein_coding retained_intron MGP_WSBEiJ_T0091949.1 MGP_WSBEiJ_G0034190.1 mouse_genomes_project 9 79467689 79471347 - Col12a1 protein_coding retained_intron MGP_WSBEiJ_T0015547.1 MGP_WSBEiJ_G0013677.1 mouse_genomes_project 9 71938534 71938742 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005398.1 MGP_WSBEiJ_G0004561.1 mouse_genomes_project 9 75422226 75537171 - Gm26903 antisense antisense MGP_WSBEiJ_T0098587.1 MGP_WSBEiJ_G0037250.1 mouse_genomes_project 9 27535658 27535765 - Gm26435 snRNA snRNA MGP_WSBEiJ_T0091863.1 MGP_WSBEiJ_G0034166.1 mouse_genomes_project 9 76528607 76619951 - MGP_WSBEiJ_P0091863 Tinag protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091864.1 MGP_WSBEiJ_G0034166.1 mouse_genomes_project 9 76528607 76619996 - MGP_WSBEiJ_P0091864 Tinag protein_coding protein_coding MGP_WSBEiJ_T0009148.1 MGP_WSBEiJ_G0007360.1 mouse_genomes_project 9 92380159 92383334 - Gm29139 lincRNA lincRNA MGP_WSBEiJ_T0015627.1 MGP_WSBEiJ_G0013757.1 mouse_genomes_project 9 104376642 104377036 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093761.1 MGP_WSBEiJ_G0034534.1 mouse_genomes_project 9 121482063 121660660 - MGP_WSBEiJ_P0093761 Cx3cr1 protein_coding protein_coding MGP_WSBEiJ_T0093769.1 MGP_WSBEiJ_G0034534.1 mouse_genomes_project 9 121642710 121660659 - MGP_WSBEiJ_P0093769 Cx3cr1 protein_coding protein_coding MGP_WSBEiJ_T0089839.1 MGP_WSBEiJ_G0033486.1 mouse_genomes_project 9 11848623 11916565 - MGP_WSBEiJ_P0089839 Hephl1 protein_coding protein_coding MGP_WSBEiJ_T0089905.1 MGP_WSBEiJ_G0033519.1 mouse_genomes_project 9 16238157 16239096 - MGP_WSBEiJ_P0089905 Olfr847 protein_coding protein_coding MGP_WSBEiJ_T0090674.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42894975 42910960 + Ift46 protein_coding processed_transcript MGP_WSBEiJ_T0090675.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42900570 42921441 + MGP_WSBEiJ_P0090675 Ift46 protein_coding protein_coding MGP_WSBEiJ_T0090676.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42900595 42910864 + MGP_WSBEiJ_P0090676 Ift46 protein_coding protein_coding MGP_WSBEiJ_T0090677.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42900686 42915052 + Ift46 protein_coding processed_transcript MGP_WSBEiJ_T0090678.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42900689 42902051 + Ift46 protein_coding processed_transcript MGP_WSBEiJ_T0090679.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42900735 42912776 + MGP_WSBEiJ_P0090679 Ift46 protein_coding protein_coding MGP_WSBEiJ_T0090680.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42900898 42910856 + MGP_WSBEiJ_P0090680 Ift46 protein_coding protein_coding MGP_WSBEiJ_T0090681.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42901335 42910925 + MGP_WSBEiJ_P0090681 Ift46 protein_coding protein_coding MGP_WSBEiJ_T0090682.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42904015 42919622 + MGP_WSBEiJ_P0090682 Ift46 protein_coding protein_coding MGP_WSBEiJ_T0090683.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42906658 42910934 + Ift46 protein_coding retained_intron MGP_WSBEiJ_T0090684.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42913029 42916292 + Ift46 protein_coding processed_transcript MGP_WSBEiJ_T0090685.1 MGP_WSBEiJ_G0033836.1 mouse_genomes_project 9 42918170 42919463 + Ift46 protein_coding retained_intron MGP_WSBEiJ_T0091852.1 MGP_WSBEiJ_G0034162.1 mouse_genomes_project 9 75536992 75599427 + Hmgcll1 protein_coding retained_intron MGP_WSBEiJ_T0091853.1 MGP_WSBEiJ_G0034162.1 mouse_genomes_project 9 75536993 75596127 + Hmgcll1 protein_coding retained_intron MGP_WSBEiJ_T0091854.1 MGP_WSBEiJ_G0034162.1 mouse_genomes_project 9 75537033 75663654 + MGP_WSBEiJ_P0091854 Hmgcll1 protein_coding protein_coding MGP_WSBEiJ_T0091855.1 MGP_WSBEiJ_G0034162.1 mouse_genomes_project 9 75537053 75663421 + MGP_WSBEiJ_P0091855 Hmgcll1 protein_coding protein_coding MGP_WSBEiJ_T0005428.1 MGP_WSBEiJ_G0004579.1 mouse_genomes_project 9 97224995 97231069 + Gm16010 antisense antisense MGP_WSBEiJ_T0005429.1 MGP_WSBEiJ_G0004579.1 mouse_genomes_project 9 97226503 97227475 + Gm16010 antisense antisense MGP_WSBEiJ_T0091950.1 MGP_WSBEiJ_G0034191.1 mouse_genomes_project 9 79510689 79515637 - MGP_WSBEiJ_P0091950 Cox7a2 protein_coding protein_coding MGP_WSBEiJ_T0009070.1 MGP_WSBEiJ_G0007297.1 mouse_genomes_project 9 30375559 30428905 + lincRNA lincRNA MGP_WSBEiJ_T0017941.1 MGP_WSBEiJ_G0015163.1 mouse_genomes_project 9 72467720 72470784 + 2310009A05Rik processed_transcript antisense MGP_WSBEiJ_T0017942.1 MGP_WSBEiJ_G0015163.1 mouse_genomes_project 9 72467732 72470371 + 2310009A05Rik processed_transcript retained_intron MGP_WSBEiJ_T0002327.1 MGP_WSBEiJ_G0002244.1 mouse_genomes_project 9 71722971 71724530 + TEC TEC MGP_WSBEiJ_T0093783.1 MGP_WSBEiJ_G0034543.1 mouse_genomes_project 9 121910674 122099511 + MGP_WSBEiJ_P0093783 Myrip protein_coding protein_coding MGP_WSBEiJ_T0093784.1 MGP_WSBEiJ_G0034543.1 mouse_genomes_project 9 122005764 122046415 + MGP_WSBEiJ_P0093784 Myrip protein_coding protein_coding MGP_WSBEiJ_T0093785.1 MGP_WSBEiJ_G0034543.1 mouse_genomes_project 9 122031624 122038946 + Myrip protein_coding processed_transcript MGP_WSBEiJ_T0093786.1 MGP_WSBEiJ_G0034543.1 mouse_genomes_project 9 122049184 122054300 + Myrip protein_coding processed_transcript MGP_WSBEiJ_T0091044.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53733911 53800988 - Nrg4 protein_coding processed_transcript MGP_WSBEiJ_T0091045.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53733912 53801018 - MGP_WSBEiJ_P0091045 Nrg4 protein_coding protein_coding MGP_WSBEiJ_T0091046.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53734909 53759767 - Nrg4 protein_coding processed_transcript MGP_WSBEiJ_T0091047.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53734985 53800980 - MGP_WSBEiJ_P0091047 Nrg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091048.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53734988 53845982 - MGP_WSBEiJ_P0091048 Nrg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091049.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53734989 53800965 - MGP_WSBEiJ_P0091049 Nrg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091050.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53735053 53800974 - Nrg4 protein_coding processed_transcript MGP_WSBEiJ_T0091051.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53740492 53800965 - MGP_WSBEiJ_P0091051 Nrg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091052.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53758005 53800995 - MGP_WSBEiJ_P0091052 Nrg4 protein_coding protein_coding MGP_WSBEiJ_T0091053.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53759369 53846077 - Nrg4 protein_coding processed_transcript MGP_WSBEiJ_T0091054.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53766777 53800980 - Nrg4 protein_coding processed_transcript MGP_WSBEiJ_T0091055.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53776198 53800991 - Nrg4 protein_coding processed_transcript MGP_WSBEiJ_T0091056.1 MGP_WSBEiJ_G0033957.1 mouse_genomes_project 9 53825404 53844389 - Nrg4 protein_coding processed_transcript MGP_WSBEiJ_T0093897.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124823763 124870555 - MGP_WSBEiJ_P0093897 Zdhhc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093898.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124831503 124870613 - MGP_WSBEiJ_P0093898 Zdhhc3 protein_coding protein_coding MGP_WSBEiJ_T0093899.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124834193 124870588 - MGP_WSBEiJ_P0093899 Zdhhc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093900.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124834861 124870574 - MGP_WSBEiJ_P0093900 Zdhhc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093901.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124835419 124870586 - MGP_WSBEiJ_P0093901 Zdhhc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093902.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124835679 124857738 - MGP_WSBEiJ_P0093902 Zdhhc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093903.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124837729 124870529 - MGP_WSBEiJ_P0093903 Zdhhc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093904.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124840211 124870612 - Zdhhc3 protein_coding retained_intron MGP_WSBEiJ_T0093905.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124841678 124870532 - MGP_WSBEiJ_P0093905 Zdhhc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093906.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124846389 124870586 - MGP_WSBEiJ_P0093906 Zdhhc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093907.1 MGP_WSBEiJ_G0034580.1 mouse_genomes_project 9 124857708 124870240 - MGP_WSBEiJ_P0093907 Zdhhc3 protein_coding protein_coding MGP_WSBEiJ_T0090070.1 MGP_WSBEiJ_G0033582.1 mouse_genomes_project 9 18755591 18808179 - MGP_WSBEiJ_P0090070 Dock6 protein_coding protein_coding MGP_WSBEiJ_T0090071.1 MGP_WSBEiJ_G0033582.1 mouse_genomes_project 9 18755764 18790780 - MGP_WSBEiJ_P0090071 Dock6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090073.1 MGP_WSBEiJ_G0033582.1 mouse_genomes_project 9 18793239 18808132 - MGP_WSBEiJ_P0090073 Dock6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0005430.1 MGP_WSBEiJ_G0004580.1 mouse_genomes_project 9 97297432 97300725 + Gm16185 antisense antisense MGP_WSBEiJ_T0090962.1 MGP_WSBEiJ_G0033928.1 mouse_genomes_project 9 51908549 52012978 - MGP_WSBEiJ_P0090962 Atm protein_coding unknown_likely_coding MGP_WSBEiJ_T0090963.1 MGP_WSBEiJ_G0033928.1 mouse_genomes_project 9 51910501 52013004 - MGP_WSBEiJ_P0090963 Atm protein_coding protein_coding MGP_WSBEiJ_T0090964.1 MGP_WSBEiJ_G0033928.1 mouse_genomes_project 9 51911462 51913916 - Atm protein_coding retained_intron MGP_WSBEiJ_T0090965.1 MGP_WSBEiJ_G0033928.1 mouse_genomes_project 9 51916730 51925697 - MGP_WSBEiJ_P0090965 Atm protein_coding protein_coding MGP_WSBEiJ_T0090966.1 MGP_WSBEiJ_G0033928.1 mouse_genomes_project 9 51995488 52012937 - Atm protein_coding retained_intron MGP_WSBEiJ_T0090967.1 MGP_WSBEiJ_G0033928.1 mouse_genomes_project 9 52000822 52012872 - MGP_WSBEiJ_P0090967 Atm protein_coding protein_coding MGP_WSBEiJ_T0091257.1 MGP_WSBEiJ_G0034020.1 mouse_genomes_project 9 58356360 58391522 + MGP_WSBEiJ_P0091257 Parp6 protein_coding protein_coding MGP_WSBEiJ_T0089871.1 MGP_WSBEiJ_G0033497.1 mouse_genomes_project 9 13862485 13865016 + MGP_WSBEiJ_P0089871 Gm5611 protein_coding protein_coding MGP_WSBEiJ_T0009112.1 MGP_WSBEiJ_G0007330.1 mouse_genomes_project 9 67394119 67394491 + Gm28195 lincRNA lincRNA MGP_WSBEiJ_T0005350.1 MGP_WSBEiJ_G0004530.1 mouse_genomes_project 9 34536553 34541468 + Gm3896 antisense antisense MGP_WSBEiJ_T0090960.1 MGP_WSBEiJ_G0033926.1 mouse_genomes_project 9 51855702 51873331 + MGP_WSBEiJ_P0090960 Kdelc2 protein_coding protein_coding MGP_WSBEiJ_T0093778.1 MGP_WSBEiJ_G0034541.1 mouse_genomes_project 9 121726820 121736002 + MGP_WSBEiJ_P0093778 protein_coding protein_coding MGP_WSBEiJ_T0002372.1 MGP_WSBEiJ_G0002288.1 mouse_genomes_project 9 95516015 95517114 + TEC TEC MGP_WSBEiJ_T0090553.1 MGP_WSBEiJ_G0033796.1 mouse_genomes_project 9 40392547 40452863 - MGP_WSBEiJ_P0090553 Tbcel protein_coding protein_coding MGP_WSBEiJ_T0090554.1 MGP_WSBEiJ_G0033796.1 mouse_genomes_project 9 40392547 40438114 - MGP_WSBEiJ_P0090554 Tbcel protein_coding protein_coding MGP_WSBEiJ_T0090555.1 MGP_WSBEiJ_G0033796.1 mouse_genomes_project 9 40393647 40441993 - MGP_WSBEiJ_P0090555 Tbcel protein_coding protein_coding MGP_WSBEiJ_T0090556.1 MGP_WSBEiJ_G0033796.1 mouse_genomes_project 9 40394218 40408299 - Tbcel protein_coding processed_transcript MGP_WSBEiJ_T0090557.1 MGP_WSBEiJ_G0033796.1 mouse_genomes_project 9 40395904 40452870 - MGP_WSBEiJ_P0090557 Tbcel protein_coding protein_coding MGP_WSBEiJ_T0090558.1 MGP_WSBEiJ_G0033796.1 mouse_genomes_project 9 40396018 40452823 - MGP_WSBEiJ_P0090558 Tbcel protein_coding protein_coding MGP_WSBEiJ_T0090559.1 MGP_WSBEiJ_G0033796.1 mouse_genomes_project 9 40429881 40491949 - MGP_WSBEiJ_P0090559 Tbcel protein_coding protein_coding MGP_WSBEiJ_T0005380.1 MGP_WSBEiJ_G0004548.1 mouse_genomes_project 9 56765163 56766338 + Gm16131 antisense antisense MGP_WSBEiJ_T0010898.1 MGP_WSBEiJ_G0009055.1 mouse_genomes_project 9 92342403 92342507 - Mir6386 miRNA miRNA MGP_WSBEiJ_T0015505.1 MGP_WSBEiJ_G0013635.1 mouse_genomes_project 9 19494444 19494957 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091929.1 MGP_WSBEiJ_G0034184.1 mouse_genomes_project 9 78127770 78142080 - MGP_WSBEiJ_P0091929 Mb21d1 protein_coding protein_coding MGP_WSBEiJ_T0091930.1 MGP_WSBEiJ_G0034184.1 mouse_genomes_project 9 78129033 78141887 - MGP_WSBEiJ_P0091930 Mb21d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002333.1 MGP_WSBEiJ_G0002250.1 mouse_genomes_project 9 72090963 72094465 + TEC TEC MGP_WSBEiJ_T0093733.1 MGP_WSBEiJ_G0034523.1 mouse_genomes_project 9 120705731 120726663 - MGP_WSBEiJ_P0093733 Slc22a14 protein_coding protein_coding MGP_WSBEiJ_T0093734.1 MGP_WSBEiJ_G0034523.1 mouse_genomes_project 9 120705732 120923775 - MGP_WSBEiJ_P0093734 Slc22a14 protein_coding protein_coding MGP_WSBEiJ_T0093735.1 MGP_WSBEiJ_G0034523.1 mouse_genomes_project 9 120705944 120709915 - MGP_WSBEiJ_P0093735 Slc22a14 protein_coding protein_coding MGP_WSBEiJ_T0093736.1 MGP_WSBEiJ_G0034523.1 mouse_genomes_project 9 120717228 120726618 - MGP_WSBEiJ_P0093736 Slc22a14 protein_coding protein_coding MGP_WSBEiJ_T0090449.1 MGP_WSBEiJ_G0033734.1 mouse_genomes_project 9 36476591 36477518 + MGP_WSBEiJ_P0090449 Olfr924 protein_coding protein_coding MGP_WSBEiJ_T0091608.1 MGP_WSBEiJ_G0034110.1 mouse_genomes_project 9 69239638 69259700 + MGP_WSBEiJ_P0091608 Bnip2 protein_coding protein_coding MGP_WSBEiJ_T0091609.1 MGP_WSBEiJ_G0034110.1 mouse_genomes_project 9 69239676 69259638 + MGP_WSBEiJ_P0091609 Bnip2 protein_coding protein_coding MGP_WSBEiJ_T0091610.1 MGP_WSBEiJ_G0034110.1 mouse_genomes_project 9 69239687 69255384 + MGP_WSBEiJ_P0091610 Bnip2 protein_coding protein_coding MGP_WSBEiJ_T0091611.1 MGP_WSBEiJ_G0034110.1 mouse_genomes_project 9 69239689 69250535 + MGP_WSBEiJ_P0091611 Bnip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091612.1 MGP_WSBEiJ_G0034110.1 mouse_genomes_project 9 69245720 69258498 + MGP_WSBEiJ_P0091612 Bnip2 protein_coding protein_coding MGP_WSBEiJ_T0091613.1 MGP_WSBEiJ_G0034110.1 mouse_genomes_project 9 69248552 69253615 + Bnip2 protein_coding retained_intron MGP_WSBEiJ_T0091614.1 MGP_WSBEiJ_G0034110.1 mouse_genomes_project 9 69249608 69255014 + Bnip2 protein_coding processed_transcript MGP_WSBEiJ_T0091615.1 MGP_WSBEiJ_G0034110.1 mouse_genomes_project 9 69254755 69256140 + MGP_WSBEiJ_P0091615 Bnip2 protein_coding protein_coding MGP_WSBEiJ_T0090225.1 MGP_WSBEiJ_G0033640.1 mouse_genomes_project 9 29159162 29231350 - MGP_WSBEiJ_P0090225 Barx2 protein_coding protein_coding MGP_WSBEiJ_T0089915.1 MGP_WSBEiJ_G0033529.1 mouse_genomes_project 9 16893936 16895013 - MGP_WSBEiJ_P0089915 Olfr866 protein_coding protein_coding MGP_WSBEiJ_T0090497.1 MGP_WSBEiJ_G0033776.1 mouse_genomes_project 9 37922654 37923620 + MGP_WSBEiJ_P0090497 Olfr982 protein_coding protein_coding MGP_WSBEiJ_T0093072.1 MGP_WSBEiJ_G0034401.1 mouse_genomes_project 9 108793932 108802980 - MGP_WSBEiJ_P0093072 Apeh protein_coding protein_coding MGP_WSBEiJ_T0093073.1 MGP_WSBEiJ_G0034401.1 mouse_genomes_project 9 108793942 108794557 - Apeh protein_coding retained_intron MGP_WSBEiJ_T0093074.1 MGP_WSBEiJ_G0034401.1 mouse_genomes_project 9 108793942 108803000 - Apeh protein_coding retained_intron MGP_WSBEiJ_T0093075.1 MGP_WSBEiJ_G0034401.1 mouse_genomes_project 9 108794442 108794997 - Apeh protein_coding retained_intron MGP_WSBEiJ_T0093076.1 MGP_WSBEiJ_G0034401.1 mouse_genomes_project 9 108794676 108797049 - Apeh protein_coding retained_intron MGP_WSBEiJ_T0093077.1 MGP_WSBEiJ_G0034401.1 mouse_genomes_project 9 108795304 108803010 - Apeh protein_coding retained_intron MGP_WSBEiJ_T0093078.1 MGP_WSBEiJ_G0034401.1 mouse_genomes_project 9 108800877 108802554 - Apeh protein_coding retained_intron MGP_WSBEiJ_T0093079.1 MGP_WSBEiJ_G0034401.1 mouse_genomes_project 9 108801156 108803013 - MGP_WSBEiJ_P0093079 Apeh protein_coding protein_coding MGP_WSBEiJ_T0090202.1 MGP_WSBEiJ_G0033634.1 mouse_genomes_project 9 28297912 28340333 + MGP_WSBEiJ_P0090202 Zbtb44 protein_coding protein_coding MGP_WSBEiJ_T0090203.1 MGP_WSBEiJ_G0033634.1 mouse_genomes_project 9 28324764 28340061 + MGP_WSBEiJ_P0090203 Zbtb44 protein_coding protein_coding MGP_WSBEiJ_T0099876.1 MGP_WSBEiJ_G0038539.1 mouse_genomes_project 9 87952182 87952312 - Gm23176 snoRNA snoRNA MGP_WSBEiJ_T0002364.1 MGP_WSBEiJ_G0002280.1 mouse_genomes_project 9 91137870 91140251 - TEC TEC MGP_WSBEiJ_T0091641.1 MGP_WSBEiJ_G0034117.1 mouse_genomes_project 9 69835206 69889908 + MGP_WSBEiJ_P0091641 Sltm protein_coding protein_coding MGP_WSBEiJ_T0009116.1 MGP_WSBEiJ_G0007333.1 mouse_genomes_project 9 71565055 71591945 - Gm27188 lincRNA lincRNA MGP_WSBEiJ_T0090506.1 MGP_WSBEiJ_G0033783.1 mouse_genomes_project 9 38123272 38133519 + Scn3b protein_coding processed_transcript MGP_WSBEiJ_T0090507.1 MGP_WSBEiJ_G0033783.1 mouse_genomes_project 9 38123283 38132174 + Scn3b protein_coding retained_intron MGP_WSBEiJ_T0090508.1 MGP_WSBEiJ_G0033783.1 mouse_genomes_project 9 38123432 38131419 + Scn3b protein_coding retained_intron MGP_WSBEiJ_T0090509.1 MGP_WSBEiJ_G0033783.1 mouse_genomes_project 9 38123690 38143249 + MGP_WSBEiJ_P0090509 Scn3b protein_coding protein_coding MGP_WSBEiJ_T0090510.1 MGP_WSBEiJ_G0033783.1 mouse_genomes_project 9 38123996 38146464 + MGP_WSBEiJ_P0090510 Scn3b protein_coding protein_coding MGP_WSBEiJ_T0010855.1 MGP_WSBEiJ_G0009012.1 mouse_genomes_project 9 12123888 12123955 + miRNA miRNA MGP_WSBEiJ_T0093919.1 MGP_WSBEiJ_G0034588.1 mouse_genomes_project 9 125369884 125407670 - Slc6a20b protein_coding retained_intron MGP_WSBEiJ_T0093920.1 MGP_WSBEiJ_G0034588.1 mouse_genomes_project 9 125369887 125407836 - MGP_WSBEiJ_P0093920 Slc6a20b protein_coding protein_coding MGP_WSBEiJ_T0093921.1 MGP_WSBEiJ_G0034588.1 mouse_genomes_project 9 125370887 125403835 - Slc6a20b protein_coding processed_transcript MGP_WSBEiJ_T0093922.1 MGP_WSBEiJ_G0034588.1 mouse_genomes_project 9 125370893 125407598 - MGP_WSBEiJ_P0093922 Slc6a20b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093923.1 MGP_WSBEiJ_G0034588.1 mouse_genomes_project 9 125386380 125407554 - MGP_WSBEiJ_P0093923 Slc6a20b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093924.1 MGP_WSBEiJ_G0034588.1 mouse_genomes_project 9 125387984 125407772 - Slc6a20b protein_coding processed_transcript MGP_WSBEiJ_T0009208.1 MGP_WSBEiJ_G0007405.1 mouse_genomes_project 9 124630777 124649969 - A530083I20Rik lincRNA lincRNA MGP_WSBEiJ_T0009209.1 MGP_WSBEiJ_G0007405.1 mouse_genomes_project 9 124641002 124649955 - A530083I20Rik lincRNA lincRNA MGP_WSBEiJ_T0011541.1 MGP_WSBEiJ_G0009698.1 mouse_genomes_project 9 79805139 79805425 + Gm25433 misc_RNA misc_RNA MGP_WSBEiJ_T0091903.1 MGP_WSBEiJ_G0034174.1 mouse_genomes_project 9 77744395 77802902 + MGP_WSBEiJ_P0091903 Ick protein_coding protein_coding MGP_WSBEiJ_T0091904.1 MGP_WSBEiJ_G0034174.1 mouse_genomes_project 9 77744438 77748632 + MGP_WSBEiJ_P0091904 Ick protein_coding protein_coding MGP_WSBEiJ_T0091905.1 MGP_WSBEiJ_G0034174.1 mouse_genomes_project 9 77748045 77753668 + Ick protein_coding processed_transcript MGP_WSBEiJ_T0091906.1 MGP_WSBEiJ_G0034174.1 mouse_genomes_project 9 77748443 77769318 + Ick protein_coding retained_intron MGP_WSBEiJ_T0091907.1 MGP_WSBEiJ_G0034174.1 mouse_genomes_project 9 77748486 77760855 + MGP_WSBEiJ_P0091907 Ick protein_coding protein_coding MGP_WSBEiJ_T0091908.1 MGP_WSBEiJ_G0034174.1 mouse_genomes_project 9 77748502 77800377 + MGP_WSBEiJ_P0091908 Ick protein_coding protein_coding MGP_WSBEiJ_T0091909.1 MGP_WSBEiJ_G0034174.1 mouse_genomes_project 9 77748517 77807080 + MGP_WSBEiJ_P0091909 Ick protein_coding protein_coding MGP_WSBEiJ_T0091910.1 MGP_WSBEiJ_G0034174.1 mouse_genomes_project 9 77790445 77805426 + Ick protein_coding retained_intron MGP_WSBEiJ_T0091920.1 MGP_WSBEiJ_G0034181.1 mouse_genomes_project 9 77997644 78015875 - MGP_WSBEiJ_P0091920 Gm8074 protein_coding protein_coding MGP_WSBEiJ_T0091063.1 MGP_WSBEiJ_G0033960.1 mouse_genomes_project 9 54070026 54073928 + MGP_WSBEiJ_P0091063 Isl2 protein_coding protein_coding MGP_WSBEiJ_T0091064.1 MGP_WSBEiJ_G0033960.1 mouse_genomes_project 9 54072502 54077540 + MGP_WSBEiJ_P0091064 Isl2 protein_coding protein_coding MGP_WSBEiJ_T0091065.1 MGP_WSBEiJ_G0033960.1 mouse_genomes_project 9 54072561 54077540 + MGP_WSBEiJ_P0091065 Isl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091066.1 MGP_WSBEiJ_G0033960.1 mouse_genomes_project 9 54072561 54077538 + MGP_WSBEiJ_P0091066 Isl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091067.1 MGP_WSBEiJ_G0033960.1 mouse_genomes_project 9 54073693 54075638 + Isl2 protein_coding retained_intron MGP_WSBEiJ_T0099879.1 MGP_WSBEiJ_G0038542.1 mouse_genomes_project 9 97660619 97660746 - Gm25607 snoRNA snoRNA MGP_WSBEiJ_T0092361.1 MGP_WSBEiJ_G0034274.1 mouse_genomes_project 9 99125713 99127445 + MGP_WSBEiJ_P0092361 protein_coding protein_coding MGP_WSBEiJ_T0090233.1 MGP_WSBEiJ_G0033642.1 mouse_genomes_project 9 29661991 29694592 - MGP_WSBEiJ_P0090233 Kcnj5 protein_coding protein_coding MGP_WSBEiJ_T0089909.1 MGP_WSBEiJ_G0033523.1 mouse_genomes_project 9 16389102 16390020 - MGP_WSBEiJ_P0089909 Olfr853 protein_coding protein_coding MGP_WSBEiJ_T0092294.1 MGP_WSBEiJ_G0034260.1 mouse_genomes_project 9 96655057 96662312 - protein_coding processed_transcript MGP_WSBEiJ_T0090736.1 MGP_WSBEiJ_G0033857.1 mouse_genomes_project 9 43592577 43939788 + MGP_WSBEiJ_P0090736 Dscaml1 protein_coding protein_coding MGP_WSBEiJ_T0015511.1 MGP_WSBEiJ_G0013641.1 mouse_genomes_project 9 22169225 22169303 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005412.1 MGP_WSBEiJ_G0004571.1 mouse_genomes_project 9 94789652 94796265 - Gm16262 antisense antisense MGP_WSBEiJ_T0089873.1 MGP_WSBEiJ_G0033499.1 mouse_genomes_project 9 15145771 15223132 - MGP_WSBEiJ_P0089873 Naalad2 protein_coding protein_coding MGP_WSBEiJ_T0089874.1 MGP_WSBEiJ_G0033499.1 mouse_genomes_project 9 15146840 15210035 - MGP_WSBEiJ_P0089874 Naalad2 protein_coding protein_coding MGP_WSBEiJ_T0089875.1 MGP_WSBEiJ_G0033499.1 mouse_genomes_project 9 15146841 15216640 - MGP_WSBEiJ_P0089875 Naalad2 protein_coding protein_coding MGP_WSBEiJ_T0089876.1 MGP_WSBEiJ_G0033499.1 mouse_genomes_project 9 15204321 15209921 - Naalad2 protein_coding retained_intron MGP_WSBEiJ_T0089877.1 MGP_WSBEiJ_G0033499.1 mouse_genomes_project 9 15209056 15228636 - MGP_WSBEiJ_P0089877 Naalad2 protein_coding protein_coding MGP_WSBEiJ_T0089878.1 MGP_WSBEiJ_G0033499.1 mouse_genomes_project 9 15209827 15228638 - MGP_WSBEiJ_P0089878 Naalad2 protein_coding protein_coding MGP_WSBEiJ_T0089879.1 MGP_WSBEiJ_G0033499.1 mouse_genomes_project 9 15212071 15228659 - MGP_WSBEiJ_P0089879 Naalad2 protein_coding protein_coding MGP_WSBEiJ_T0089880.1 MGP_WSBEiJ_G0033499.1 mouse_genomes_project 9 15212177 15228640 - Naalad2 protein_coding processed_transcript MGP_WSBEiJ_T0089778.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10477312 10531505 + MGP_WSBEiJ_P0089778 Mtmr2 protein_coding protein_coding MGP_WSBEiJ_T0089779.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10478083 10531505 + MGP_WSBEiJ_P0089779 Mtmr2 protein_coding protein_coding MGP_WSBEiJ_T0089780.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10478087 10508422 + Mtmr2 protein_coding processed_transcript MGP_WSBEiJ_T0089781.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10478099 10531505 + MGP_WSBEiJ_P0089781 Mtmr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089782.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10478221 10510943 + MGP_WSBEiJ_P0089782 Mtmr2 protein_coding protein_coding MGP_WSBEiJ_T0089783.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10478291 10510943 + MGP_WSBEiJ_P0089783 Mtmr2 protein_coding protein_coding MGP_WSBEiJ_T0089784.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10490774 10516606 + MGP_WSBEiJ_P0089784 Mtmr2 protein_coding protein_coding MGP_WSBEiJ_T0089785.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10491537 10510941 + Mtmr2 protein_coding processed_transcript MGP_WSBEiJ_T0089786.1 MGP_WSBEiJ_G0033470.1 mouse_genomes_project 9 10520540 10531504 + Mtmr2 protein_coding retained_intron MGP_WSBEiJ_T0010865.1 MGP_WSBEiJ_G0009022.1 mouse_genomes_project 9 25475215 25475312 + Gm44316 miRNA miRNA MGP_WSBEiJ_T0009172.1 MGP_WSBEiJ_G0007379.1 mouse_genomes_project 9 103213647 103213907 - Gm28621 lincRNA lincRNA MGP_WSBEiJ_T0002363.1 MGP_WSBEiJ_G0002279.1 mouse_genomes_project 9 90131969 90136298 - TEC TEC MGP_WSBEiJ_T0009127.1 MGP_WSBEiJ_G0007343.1 mouse_genomes_project 9 76953874 76990171 - 5730403I07Rik lincRNA lincRNA MGP_WSBEiJ_T0091453.1 MGP_WSBEiJ_G0034072.1 mouse_genomes_project 9 64382220 64402496 + MGP_WSBEiJ_P0091453 Ubap1l protein_coding protein_coding MGP_WSBEiJ_T0091858.1 MGP_WSBEiJ_G0034164.1 mouse_genomes_project 9 75757025 75861164 - MGP_WSBEiJ_P0091858 Hcrtr2 protein_coding protein_coding MGP_WSBEiJ_T0091859.1 MGP_WSBEiJ_G0034164.1 mouse_genomes_project 9 75761121 75861409 - MGP_WSBEiJ_P0091859 Hcrtr2 protein_coding protein_coding MGP_WSBEiJ_T0091860.1 MGP_WSBEiJ_G0034164.1 mouse_genomes_project 9 75859228 75860875 - Hcrtr2 protein_coding retained_intron MGP_WSBEiJ_T0093329.1 MGP_WSBEiJ_G0034438.1 mouse_genomes_project 9 109791338 109793140 - MGP_WSBEiJ_P0093329 protein_coding protein_coding MGP_WSBEiJ_T0093331.1 MGP_WSBEiJ_G0034438.1 mouse_genomes_project 9 109791343 109792657 - MGP_WSBEiJ_P0093331 protein_coding protein_coding MGP_WSBEiJ_T0090031.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18335882 18422823 + MGP_WSBEiJ_P0090031 Dnm2 protein_coding protein_coding MGP_WSBEiJ_T0090032.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18335906 18422207 + MGP_WSBEiJ_P0090032 Dnm2 protein_coding protein_coding MGP_WSBEiJ_T0090033.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18335919 18422209 + MGP_WSBEiJ_P0090033 Dnm2 protein_coding protein_coding MGP_WSBEiJ_T0090034.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18335942 18379686 + MGP_WSBEiJ_P0090034 Dnm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090035.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18335945 18422195 + MGP_WSBEiJ_P0090035 Dnm2 protein_coding protein_coding MGP_WSBEiJ_T0090036.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18335950 18422193 + MGP_WSBEiJ_P0090036 Dnm2 protein_coding protein_coding MGP_WSBEiJ_T0090037.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18336070 18421471 + MGP_WSBEiJ_P0090037 Dnm2 protein_coding protein_coding MGP_WSBEiJ_T0090038.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18336070 18403512 + MGP_WSBEiJ_P0090038 Dnm2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090039.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18336217 18405059 + Dnm2 protein_coding processed_transcript MGP_WSBEiJ_T0090040.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18336218 18422823 + MGP_WSBEiJ_P0090040 Dnm2 protein_coding protein_coding MGP_WSBEiJ_T0090041.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18368415 18368879 + Dnm2 protein_coding processed_transcript MGP_WSBEiJ_T0090042.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18388242 18412934 + MGP_WSBEiJ_P0090042 Dnm2 protein_coding protein_coding MGP_WSBEiJ_T0090043.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18392064 18422828 + Dnm2 protein_coding retained_intron MGP_WSBEiJ_T0090044.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18407576 18419691 + Dnm2 protein_coding retained_intron MGP_WSBEiJ_T0090045.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18408179 18422202 + MGP_WSBEiJ_P0090045 Dnm2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090046.1 MGP_WSBEiJ_G0033572.1 mouse_genomes_project 9 18420175 18421468 + Dnm2 protein_coding processed_transcript MGP_WSBEiJ_T0093946.1 MGP_WSBEiJ_G0034594.1 mouse_genomes_project 9 125626597 125637204 - MGP_WSBEiJ_P0093946 Xcr1 protein_coding protein_coding MGP_WSBEiJ_T0091362.1 MGP_WSBEiJ_G0034046.1 mouse_genomes_project 9 62309335 62313716 - 2300009A05Rik protein_coding processed_transcript MGP_WSBEiJ_T0091363.1 MGP_WSBEiJ_G0034046.1 mouse_genomes_project 9 62309335 62314130 - MGP_WSBEiJ_P0091363 2300009A05Rik protein_coding protein_coding MGP_WSBEiJ_T0091364.1 MGP_WSBEiJ_G0034046.1 mouse_genomes_project 9 62309336 62313716 - 2300009A05Rik protein_coding processed_transcript MGP_WSBEiJ_T0091365.1 MGP_WSBEiJ_G0034046.1 mouse_genomes_project 9 62312364 62314135 - 2300009A05Rik protein_coding retained_intron MGP_WSBEiJ_T0099882.1 MGP_WSBEiJ_G0038545.1 mouse_genomes_project 9 101621574 101621701 + Gm24338 snoRNA snoRNA MGP_WSBEiJ_T0015521.1 MGP_WSBEiJ_G0013651.1 mouse_genomes_project 9 34052494 34052886 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092181.1 MGP_WSBEiJ_G0034237.1 mouse_genomes_project 9 90139502 90177625 + MGP_WSBEiJ_P0092181 Adamts7 protein_coding protein_coding MGP_WSBEiJ_T0092182.1 MGP_WSBEiJ_G0034237.1 mouse_genomes_project 9 90139511 90185596 + MGP_WSBEiJ_P0092182 Adamts7 protein_coding protein_coding MGP_WSBEiJ_T0092183.1 MGP_WSBEiJ_G0034237.1 mouse_genomes_project 9 90139557 90177625 + MGP_WSBEiJ_P0092183 Adamts7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092184.1 MGP_WSBEiJ_G0034237.1 mouse_genomes_project 9 90139635 90177515 + MGP_WSBEiJ_P0092184 Adamts7 protein_coding protein_coding MGP_WSBEiJ_T0092185.1 MGP_WSBEiJ_G0034237.1 mouse_genomes_project 9 90139659 90177627 + MGP_WSBEiJ_P0092185 Adamts7 protein_coding protein_coding MGP_WSBEiJ_T0092186.1 MGP_WSBEiJ_G0034237.1 mouse_genomes_project 9 90166179 90169090 + Adamts7 protein_coding retained_intron MGP_WSBEiJ_T0092187.1 MGP_WSBEiJ_G0034237.1 mouse_genomes_project 9 90168508 90171012 + Adamts7 protein_coding processed_transcript MGP_WSBEiJ_T0092188.1 MGP_WSBEiJ_G0034237.1 mouse_genomes_project 9 90172652 90177622 + Adamts7 protein_coding retained_intron MGP_WSBEiJ_T0091005.1 MGP_WSBEiJ_G0033944.1 mouse_genomes_project 9 53100428 53162781 - MGP_WSBEiJ_P0091005 Acsbg1 protein_coding protein_coding MGP_WSBEiJ_T0091006.1 MGP_WSBEiJ_G0033944.1 mouse_genomes_project 9 53100431 53162581 - MGP_WSBEiJ_P0091006 Acsbg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091007.1 MGP_WSBEiJ_G0033944.1 mouse_genomes_project 9 53126167 53143855 - MGP_WSBEiJ_P0091007 Acsbg1 protein_coding protein_coding MGP_WSBEiJ_T0091008.1 MGP_WSBEiJ_G0033944.1 mouse_genomes_project 9 53126193 53148050 - MGP_WSBEiJ_P0091008 Acsbg1 protein_coding protein_coding MGP_WSBEiJ_T0091009.1 MGP_WSBEiJ_G0033944.1 mouse_genomes_project 9 53126213 53162606 - MGP_WSBEiJ_P0091009 Acsbg1 protein_coding protein_coding MGP_WSBEiJ_T0091010.1 MGP_WSBEiJ_G0033944.1 mouse_genomes_project 9 53146886 53147921 - Acsbg1 protein_coding retained_intron MGP_WSBEiJ_T0091091.1 MGP_WSBEiJ_G0033970.1 mouse_genomes_project 9 55415951 55450820 + MGP_WSBEiJ_P0091091 Cspg4 protein_coding protein_coding MGP_WSBEiJ_T0093752.1 MGP_WSBEiJ_G0034529.1 mouse_genomes_project 9 121006903 121029093 + MGP_WSBEiJ_P0093752 Exog protein_coding protein_coding MGP_WSBEiJ_T0093753.1 MGP_WSBEiJ_G0034529.1 mouse_genomes_project 9 121006931 121027806 + MGP_WSBEiJ_P0093753 Exog protein_coding protein_coding MGP_WSBEiJ_T0005462.1 MGP_WSBEiJ_G0004604.1 mouse_genomes_project 9 108636408 108637726 - Gm37974 antisense antisense MGP_WSBEiJ_T0090589.1 MGP_WSBEiJ_G0033810.1 mouse_genomes_project 9 42182325 42184268 + MGP_WSBEiJ_P0090589 C1qtnf5 protein_coding protein_coding MGP_WSBEiJ_T0090590.1 MGP_WSBEiJ_G0033810.1 mouse_genomes_project 9 42182334 42184266 + MGP_WSBEiJ_P0090590 C1qtnf5 protein_coding protein_coding MGP_WSBEiJ_T0090591.1 MGP_WSBEiJ_G0033810.1 mouse_genomes_project 9 42182354 42184265 + MGP_WSBEiJ_P0090591 C1qtnf5 protein_coding protein_coding MGP_WSBEiJ_T0090592.1 MGP_WSBEiJ_G0033810.1 mouse_genomes_project 9 42182389 42183574 + MGP_WSBEiJ_P0090592 C1qtnf5 protein_coding protein_coding MGP_WSBEiJ_T0090593.1 MGP_WSBEiJ_G0033810.1 mouse_genomes_project 9 42182394 42184265 + MGP_WSBEiJ_P0090593 C1qtnf5 protein_coding protein_coding MGP_WSBEiJ_T0090594.1 MGP_WSBEiJ_G0033810.1 mouse_genomes_project 9 42182401 42182988 + MGP_WSBEiJ_P0090594 C1qtnf5 protein_coding protein_coding MGP_WSBEiJ_T0090595.1 MGP_WSBEiJ_G0033810.1 mouse_genomes_project 9 42182455 42183853 + MGP_WSBEiJ_P0090595 C1qtnf5 protein_coding protein_coding MGP_WSBEiJ_T0090596.1 MGP_WSBEiJ_G0033810.1 mouse_genomes_project 9 42182595 42183625 + MGP_WSBEiJ_P0090596 C1qtnf5 protein_coding protein_coding MGP_WSBEiJ_T0093328.1 MGP_WSBEiJ_G0034437.1 mouse_genomes_project 9 109791338 109808934 - MGP_WSBEiJ_P0093328 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093330.1 MGP_WSBEiJ_G0034437.1 mouse_genomes_project 9 109791341 109808983 - protein_coding retained_intron MGP_WSBEiJ_T0093332.1 MGP_WSBEiJ_G0034437.1 mouse_genomes_project 9 109791875 109793744 - MGP_WSBEiJ_P0093332 protein_coding protein_coding MGP_WSBEiJ_T0089770.1 MGP_WSBEiJ_G0033466.1 mouse_genomes_project 9 10047780 10050251 - MGP_WSBEiJ_P0089770 Jrkl protein_coding protein_coding MGP_WSBEiJ_T0002369.1 MGP_WSBEiJ_G0002285.1 mouse_genomes_project 9 91405833 91406733 - TEC TEC MGP_WSBEiJ_T0015633.1 MGP_WSBEiJ_G0013763.1 mouse_genomes_project 9 107866439 107867708 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091378.1 MGP_WSBEiJ_G0034050.1 mouse_genomes_project 9 62893062 62967946 - MGP_WSBEiJ_P0091378 Smad6 protein_coding protein_coding MGP_WSBEiJ_T0091379.1 MGP_WSBEiJ_G0034050.1 mouse_genomes_project 9 62893995 62962874 - Smad6 protein_coding processed_transcript MGP_WSBEiJ_T0091380.1 MGP_WSBEiJ_G0034050.1 mouse_genomes_project 9 62967647 62967919 - MGP_WSBEiJ_P0091380 Smad6 protein_coding protein_coding MGP_WSBEiJ_T0090368.1 MGP_WSBEiJ_G0033679.1 mouse_genomes_project 9 34741395 34757310 + MGP_WSBEiJ_P0090368 Tmem218 protein_coding protein_coding MGP_WSBEiJ_T0093374.1 MGP_WSBEiJ_G0034449.1 mouse_genomes_project 9 110761417 110764974 - MGP_WSBEiJ_P0093374 Camp protein_coding protein_coding MGP_WSBEiJ_T0092091.1 MGP_WSBEiJ_G0034215.1 mouse_genomes_project 9 86685560 86700729 + MGP_WSBEiJ_P0092091 Prss35 protein_coding protein_coding MGP_WSBEiJ_T0092092.1 MGP_WSBEiJ_G0034215.1 mouse_genomes_project 9 86685560 86700900 + MGP_WSBEiJ_P0092092 Prss35 protein_coding protein_coding MGP_WSBEiJ_T0009139.1 MGP_WSBEiJ_G0007353.1 mouse_genomes_project 9 88200281 88203423 + Gm28231 lincRNA lincRNA MGP_WSBEiJ_T0098643.1 MGP_WSBEiJ_G0037306.1 mouse_genomes_project 9 115881726 115881831 - Gm23232 snRNA snRNA MGP_WSBEiJ_T0098631.1 MGP_WSBEiJ_G0037294.1 mouse_genomes_project 9 94374356 94374513 + Gm24200 snRNA snRNA MGP_WSBEiJ_T0090117.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19490219 19915737 + MGP_WSBEiJ_P0090117 Bbs9 protein_coding protein_coding MGP_WSBEiJ_T0090118.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19490226 19915731 + MGP_WSBEiJ_P0090118 Bbs9 protein_coding protein_coding MGP_WSBEiJ_T0090119.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19490235 19915731 + MGP_WSBEiJ_P0090119 Bbs9 protein_coding protein_coding MGP_WSBEiJ_T0090120.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19490235 19537969 + MGP_WSBEiJ_P0090120 Bbs9 protein_coding protein_coding MGP_WSBEiJ_T0090121.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19490371 19538015 + MGP_WSBEiJ_P0090121 Bbs9 protein_coding protein_coding MGP_WSBEiJ_T0090122.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19505167 19915737 + MGP_WSBEiJ_P0090122 Bbs9 protein_coding protein_coding MGP_WSBEiJ_T0090123.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19601855 19656877 + Bbs9 protein_coding processed_transcript MGP_WSBEiJ_T0090124.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19664032 19915737 + MGP_WSBEiJ_P0090124 Bbs9 protein_coding protein_coding MGP_WSBEiJ_T0090125.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19672045 19915737 + MGP_WSBEiJ_P0090125 Bbs9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090126.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19686442 19710103 + Bbs9 protein_coding retained_intron MGP_WSBEiJ_T0090127.1 MGP_WSBEiJ_G0033608.1 mouse_genomes_project 9 19708339 19915731 + Bbs9 protein_coding retained_intron MGP_WSBEiJ_T0010891.1 MGP_WSBEiJ_G0009048.1 mouse_genomes_project 9 66877063 66877127 - Mir7241 miRNA miRNA MGP_WSBEiJ_T0099862.1 MGP_WSBEiJ_G0038525.1 mouse_genomes_project 9 65020881 65021013 - Gm22657 snoRNA snoRNA MGP_WSBEiJ_T0015544.1 MGP_WSBEiJ_G0013674.1 mouse_genomes_project 9 71303539 71303638 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091993.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82660241 82772716 - MGP_WSBEiJ_P0091993 Phip protein_coding protein_coding MGP_WSBEiJ_T0091994.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82665183 82691500 - Phip protein_coding retained_intron MGP_WSBEiJ_T0091995.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82684747 82687930 - Phip protein_coding retained_intron MGP_WSBEiJ_T0091996.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82689514 82772608 - Phip protein_coding retained_intron MGP_WSBEiJ_T0091997.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82689830 82691220 - Phip protein_coding retained_intron MGP_WSBEiJ_T0091998.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82692293 82696242 - Phip protein_coding retained_intron MGP_WSBEiJ_T0091999.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82695784 82728236 - MGP_WSBEiJ_P0091999 Phip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092000.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82698571 82703892 - Phip protein_coding retained_intron MGP_WSBEiJ_T0092001.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82708471 82772626 - Phip protein_coding retained_intron MGP_WSBEiJ_T0092002.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82709081 82722785 - MGP_WSBEiJ_P0092002 Phip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092003.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82711190 82713023 - Phip protein_coding retained_intron MGP_WSBEiJ_T0092004.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82721513 82723817 - Phip protein_coding retained_intron MGP_WSBEiJ_T0092005.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82722823 82770769 - MGP_WSBEiJ_P0092005 Phip protein_coding protein_coding MGP_WSBEiJ_T0092006.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82725626 82728693 - Phip protein_coding retained_intron MGP_WSBEiJ_T0092007.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82740168 82772616 - Phip protein_coding retained_intron MGP_WSBEiJ_T0092008.1 MGP_WSBEiJ_G0034200.1 mouse_genomes_project 9 82751564 82772619 - Phip protein_coding retained_intron MGP_WSBEiJ_T0017958.1 MGP_WSBEiJ_G0015170.1 mouse_genomes_project 9 88475770 88478750 - Snhg5 processed_transcript lincRNA MGP_WSBEiJ_T0017959.1 MGP_WSBEiJ_G0015170.1 mouse_genomes_project 9 88475772 88478711 - Snhg5 processed_transcript lincRNA MGP_WSBEiJ_T0017960.1 MGP_WSBEiJ_G0015170.1 mouse_genomes_project 9 88475777 88477786 - Snhg5 processed_transcript lincRNA MGP_WSBEiJ_T0099825.1 MGP_WSBEiJ_G0038488.1 mouse_genomes_project 9 12122858 12122989 + Gm24455 snoRNA snoRNA MGP_WSBEiJ_T0015507.1 MGP_WSBEiJ_G0013637.1 mouse_genomes_project 9 21876783 21878085 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002395.1 MGP_WSBEiJ_G0002311.1 mouse_genomes_project 9 102604254 102608621 + TEC TEC MGP_WSBEiJ_T0090090.1 MGP_WSBEiJ_G0033592.1 mouse_genomes_project 9 18976000 18991695 + MGP_WSBEiJ_P0090090 Prkcsh protein_coding protein_coding MGP_WSBEiJ_T0090091.1 MGP_WSBEiJ_G0033592.1 mouse_genomes_project 9 18976000 18991695 + MGP_WSBEiJ_P0090091 Prkcsh protein_coding protein_coding MGP_WSBEiJ_T0093479.1 MGP_WSBEiJ_G0034462.1 mouse_genomes_project 9 111587576 111590894 - MGP_WSBEiJ_P0093479 Nradd protein_coding protein_coding MGP_WSBEiJ_T0093480.1 MGP_WSBEiJ_G0034462.1 mouse_genomes_project 9 111587949 111589764 - MGP_WSBEiJ_P0093480 Nradd protein_coding protein_coding MGP_WSBEiJ_T0093481.1 MGP_WSBEiJ_G0034462.1 mouse_genomes_project 9 111588326 111590820 - MGP_WSBEiJ_P0093481 Nradd protein_coding protein_coding MGP_WSBEiJ_T0093482.1 MGP_WSBEiJ_G0034462.1 mouse_genomes_project 9 111589021 111590873 - Nradd protein_coding retained_intron MGP_WSBEiJ_T0099854.1 MGP_WSBEiJ_G0038517.1 mouse_genomes_project 9 52119534 52119663 + Gm22304 snoRNA snoRNA MGP_WSBEiJ_T0015524.1 MGP_WSBEiJ_G0013654.1 mouse_genomes_project 9 36569183 36569850 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089679.1 MGP_WSBEiJ_G0033434.1 mouse_genomes_project 9 1036213 1054728 - MGP_WSBEiJ_P0089679 Aasdhppt protein_coding protein_coding MGP_WSBEiJ_T0009176.1 MGP_WSBEiJ_G0007382.1 mouse_genomes_project 9 106749637 106750917 - Gm29208 lincRNA lincRNA MGP_WSBEiJ_T0091355.1 MGP_WSBEiJ_G0034042.1 mouse_genomes_project 9 61760257 61773896 + MGP_WSBEiJ_P0091355 Calml4 protein_coding protein_coding MGP_WSBEiJ_T0091356.1 MGP_WSBEiJ_G0034042.1 mouse_genomes_project 9 61760257 61773896 + MGP_WSBEiJ_P0091356 Calml4 protein_coding protein_coding MGP_WSBEiJ_T0090453.1 MGP_WSBEiJ_G0033738.1 mouse_genomes_project 9 36619676 36620609 - MGP_WSBEiJ_P0090453 Olfr934 protein_coding protein_coding MGP_WSBEiJ_T0089803.1 MGP_WSBEiJ_G0033473.1 mouse_genomes_project 9 11030016 11080969 + MGP_WSBEiJ_P0089803 Sesn3 protein_coding protein_coding MGP_WSBEiJ_T0093743.1 MGP_WSBEiJ_G0034526.1 mouse_genomes_project 9 120895792 120898869 + MGP_WSBEiJ_P0093743 protein_coding protein_coding MGP_WSBEiJ_T0093745.1 MGP_WSBEiJ_G0034526.1 mouse_genomes_project 9 120897163 120905197 + MGP_WSBEiJ_P0093745 protein_coding protein_coding MGP_WSBEiJ_T0093746.1 MGP_WSBEiJ_G0034526.1 mouse_genomes_project 9 120897530 120907158 + protein_coding retained_intron MGP_WSBEiJ_T0093747.1 MGP_WSBEiJ_G0034526.1 mouse_genomes_project 9 120903451 120906169 + protein_coding retained_intron MGP_WSBEiJ_T0015514.1 MGP_WSBEiJ_G0013644.1 mouse_genomes_project 9 29987454 29987872 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017908.1 MGP_WSBEiJ_G0015153.1 mouse_genomes_project 9 38178211 38198380 + 1700110K17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017909.1 MGP_WSBEiJ_G0015153.1 mouse_genomes_project 9 38188258 38198374 + 1700110K17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0009099.1 MGP_WSBEiJ_G0007321.1 mouse_genomes_project 9 56635626 56648995 + Gm17322 lincRNA lincRNA MGP_WSBEiJ_T0005482.1 MGP_WSBEiJ_G0004621.1 mouse_genomes_project 9 123267833 123284973 + Lyzl4os antisense antisense MGP_WSBEiJ_T0005483.1 MGP_WSBEiJ_G0004621.1 mouse_genomes_project 9 123267856 123300716 + Lyzl4os antisense antisense MGP_WSBEiJ_T0092843.1 MGP_WSBEiJ_G0034371.1 mouse_genomes_project 9 108231015 108235016 + MGP_WSBEiJ_P0092843 Zmynd10 protein_coding protein_coding MGP_WSBEiJ_T0092844.1 MGP_WSBEiJ_G0034371.1 mouse_genomes_project 9 108231021 108231587 + Zmynd10 protein_coding processed_transcript MGP_WSBEiJ_T0092845.1 MGP_WSBEiJ_G0034371.1 mouse_genomes_project 9 108231171 108235016 + MGP_WSBEiJ_P0092845 Zmynd10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092846.1 MGP_WSBEiJ_G0034371.1 mouse_genomes_project 9 108232864 108233912 + Zmynd10 protein_coding retained_intron MGP_WSBEiJ_T0092847.1 MGP_WSBEiJ_G0034371.1 mouse_genomes_project 9 108234185 108234916 + Zmynd10 protein_coding retained_intron MGP_WSBEiJ_T0002407.1 MGP_WSBEiJ_G0002323.1 mouse_genomes_project 9 105713370 105714777 + TEC TEC MGP_WSBEiJ_T0090643.1 MGP_WSBEiJ_G0033828.1 mouse_genomes_project 9 42530466 42537101 - MGP_WSBEiJ_P0090643 Foxr1 protein_coding protein_coding MGP_WSBEiJ_T0092607.1 MGP_WSBEiJ_G0034328.1 mouse_genomes_project 9 105710956 105960202 - MGP_WSBEiJ_P0092607 Nek11 protein_coding protein_coding MGP_WSBEiJ_T0092608.1 MGP_WSBEiJ_G0034328.1 mouse_genomes_project 9 105713219 105957704 - MGP_WSBEiJ_P0092608 Nek11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092609.1 MGP_WSBEiJ_G0034328.1 mouse_genomes_project 9 105807468 105959965 - MGP_WSBEiJ_P0092609 Nek11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092610.1 MGP_WSBEiJ_G0034328.1 mouse_genomes_project 9 105861114 105959936 - MGP_WSBEiJ_P0092610 Nek11 protein_coding protein_coding MGP_WSBEiJ_T0098633.1 MGP_WSBEiJ_G0037296.1 mouse_genomes_project 9 96089242 96089420 + Gm24004 snRNA snRNA MGP_WSBEiJ_T0002426.1 MGP_WSBEiJ_G0002342.1 mouse_genomes_project 9 111885634 111888437 - TEC TEC MGP_WSBEiJ_T0098632.1 MGP_WSBEiJ_G0037295.1 mouse_genomes_project 9 94733626 94733722 + Gm24178 snRNA snRNA MGP_WSBEiJ_T0092668.1 MGP_WSBEiJ_G0034337.1 mouse_genomes_project 9 106818735 106823935 - MGP_WSBEiJ_P0092668 Ppm1m protein_coding protein_coding MGP_WSBEiJ_T0092669.1 MGP_WSBEiJ_G0034337.1 mouse_genomes_project 9 106818735 106823537 - MGP_WSBEiJ_P0092669 Ppm1m protein_coding protein_coding MGP_WSBEiJ_T0092670.1 MGP_WSBEiJ_G0034337.1 mouse_genomes_project 9 106819510 106821461 - MGP_WSBEiJ_P0092670 Ppm1m protein_coding protein_coding MGP_WSBEiJ_T0092671.1 MGP_WSBEiJ_G0034337.1 mouse_genomes_project 9 106822107 106822933 - Ppm1m protein_coding retained_intron MGP_WSBEiJ_T0092672.1 MGP_WSBEiJ_G0034337.1 mouse_genomes_project 9 106822517 106824402 - Ppm1m protein_coding processed_transcript MGP_WSBEiJ_T0092447.1 MGP_WSBEiJ_G0034295.1 mouse_genomes_project 9 101367247 101427874 - MGP_WSBEiJ_P0092447 Pccb protein_coding protein_coding MGP_WSBEiJ_T0092448.1 MGP_WSBEiJ_G0034295.1 mouse_genomes_project 9 101367247 101427853 - MGP_WSBEiJ_P0092448 Pccb protein_coding protein_coding MGP_WSBEiJ_T0092449.1 MGP_WSBEiJ_G0034295.1 mouse_genomes_project 9 101369582 101370878 - Pccb protein_coding retained_intron MGP_WSBEiJ_T0092450.1 MGP_WSBEiJ_G0034295.1 mouse_genomes_project 9 101384167 101427847 - MGP_WSBEiJ_P0092450 Pccb protein_coding protein_coding MGP_WSBEiJ_T0092451.1 MGP_WSBEiJ_G0034295.1 mouse_genomes_project 9 101402244 101427835 - Pccb protein_coding processed_transcript MGP_WSBEiJ_T0092452.1 MGP_WSBEiJ_G0034295.1 mouse_genomes_project 9 101416824 101427857 - MGP_WSBEiJ_P0092452 Pccb protein_coding protein_coding MGP_WSBEiJ_T0091366.1 MGP_WSBEiJ_G0034047.1 mouse_genomes_project 9 62336132 62524656 - MGP_WSBEiJ_P0091366 Iqch protein_coding protein_coding MGP_WSBEiJ_T0091367.1 MGP_WSBEiJ_G0034047.1 mouse_genomes_project 9 62336341 62524611 - MGP_WSBEiJ_P0091367 Iqch protein_coding protein_coding MGP_WSBEiJ_T0091368.1 MGP_WSBEiJ_G0034047.1 mouse_genomes_project 9 62336341 62524611 - MGP_WSBEiJ_P0091368 Iqch protein_coding protein_coding MGP_WSBEiJ_T0091369.1 MGP_WSBEiJ_G0034047.1 mouse_genomes_project 9 62336383 62524646 - MGP_WSBEiJ_P0091369 Iqch protein_coding protein_coding MGP_WSBEiJ_T0091370.1 MGP_WSBEiJ_G0034047.1 mouse_genomes_project 9 62336556 62524580 - MGP_WSBEiJ_P0091370 Iqch protein_coding protein_coding MGP_WSBEiJ_T0091371.1 MGP_WSBEiJ_G0034047.1 mouse_genomes_project 9 62503939 62524648 - Iqch protein_coding retained_intron MGP_WSBEiJ_T0090079.1 MGP_WSBEiJ_G0033585.1 mouse_genomes_project 9 18872386 18880730 - MGP_WSBEiJ_P0090079 Tmem205 protein_coding protein_coding MGP_WSBEiJ_T0090080.1 MGP_WSBEiJ_G0033585.1 mouse_genomes_project 9 18872386 18880730 - MGP_WSBEiJ_P0090080 Tmem205 protein_coding protein_coding MGP_WSBEiJ_T0090399.1 MGP_WSBEiJ_G0033692.1 mouse_genomes_project 9 35224345 35234822 - MGP_WSBEiJ_P0090399 Panx3 protein_coding protein_coding MGP_WSBEiJ_T0090400.1 MGP_WSBEiJ_G0033692.1 mouse_genomes_project 9 35229839 35234773 - MGP_WSBEiJ_P0090400 Panx3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005400.1 MGP_WSBEiJ_G0004563.1 mouse_genomes_project 9 78091044 78092244 - 4930542C12Rik antisense antisense MGP_WSBEiJ_T0009166.1 MGP_WSBEiJ_G0007373.1 mouse_genomes_project 9 100662465 100664377 - Gm28167 lincRNA lincRNA MGP_WSBEiJ_T0098623.1 MGP_WSBEiJ_G0037286.1 mouse_genomes_project 9 82270505 82270602 - Gm24393 snRNA snRNA MGP_WSBEiJ_T0092703.1 MGP_WSBEiJ_G0034345.1 mouse_genomes_project 9 107080857 107090176 - MGP_WSBEiJ_P0092703 Abhd14a protein_coding protein_coding MGP_WSBEiJ_T0092704.1 MGP_WSBEiJ_G0034345.1 mouse_genomes_project 9 107080860 107090176 - MGP_WSBEiJ_P0092704 Abhd14a protein_coding protein_coding MGP_WSBEiJ_T0092705.1 MGP_WSBEiJ_G0034345.1 mouse_genomes_project 9 107080864 107090061 - MGP_WSBEiJ_P0092705 Abhd14a protein_coding protein_coding MGP_WSBEiJ_T0092706.1 MGP_WSBEiJ_G0034345.1 mouse_genomes_project 9 107080916 107089941 - MGP_WSBEiJ_P0092706 Abhd14a protein_coding protein_coding MGP_WSBEiJ_T0092707.1 MGP_WSBEiJ_G0034345.1 mouse_genomes_project 9 107081188 107087369 - MGP_WSBEiJ_P0092707 Abhd14a protein_coding protein_coding MGP_WSBEiJ_T0092708.1 MGP_WSBEiJ_G0034345.1 mouse_genomes_project 9 107081503 107090118 - MGP_WSBEiJ_P0092708 Abhd14a protein_coding protein_coding MGP_WSBEiJ_T0092709.1 MGP_WSBEiJ_G0034345.1 mouse_genomes_project 9 107081583 107090015 - MGP_WSBEiJ_P0092709 Abhd14a protein_coding protein_coding MGP_WSBEiJ_T0092710.1 MGP_WSBEiJ_G0034345.1 mouse_genomes_project 9 107085904 107086657 - Abhd14a protein_coding retained_intron MGP_WSBEiJ_T0090395.1 MGP_WSBEiJ_G0033691.1 mouse_genomes_project 9 35212642 35221657 - Tbrg1 protein_coding retained_intron MGP_WSBEiJ_T0090396.1 MGP_WSBEiJ_G0033691.1 mouse_genomes_project 9 35212642 35221756 - MGP_WSBEiJ_P0090396 Tbrg1 protein_coding protein_coding MGP_WSBEiJ_T0090397.1 MGP_WSBEiJ_G0033691.1 mouse_genomes_project 9 35215372 35221602 - Tbrg1 protein_coding retained_intron MGP_WSBEiJ_T0090398.1 MGP_WSBEiJ_G0033691.1 mouse_genomes_project 9 35217315 35221612 - Tbrg1 protein_coding retained_intron MGP_WSBEiJ_T0091493.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64974615 65112484 + MGP_WSBEiJ_P0091493 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091494.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64974665 65074622 + Csnk1g1 protein_coding retained_intron MGP_WSBEiJ_T0091495.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64974668 65115587 + MGP_WSBEiJ_P0091495 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091496.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64974677 65115593 + MGP_WSBEiJ_P0091496 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091497.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64974711 65027233 + MGP_WSBEiJ_P0091497 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091498.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64974716 65115588 + MGP_WSBEiJ_P0091498 Csnk1g1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091499.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64974721 65045017 + Csnk1g1 protein_coding retained_intron MGP_WSBEiJ_T0091500.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64974779 65111022 + MGP_WSBEiJ_P0091500 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091501.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64975130 65113653 + MGP_WSBEiJ_P0091501 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091502.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 64991431 65101480 + MGP_WSBEiJ_P0091502 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091503.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 65026921 65115583 + MGP_WSBEiJ_P0091503 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091504.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 65078174 65102924 + MGP_WSBEiJ_P0091504 Csnk1g1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091505.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 65080496 65083440 + Csnk1g1 protein_coding retained_intron MGP_WSBEiJ_T0091506.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 65080520 65110311 + MGP_WSBEiJ_P0091506 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091507.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 65080863 65101480 + MGP_WSBEiJ_P0091507 Csnk1g1 protein_coding protein_coding MGP_WSBEiJ_T0091508.1 MGP_WSBEiJ_G0034086.1 mouse_genomes_project 9 65106599 65110329 + Csnk1g1 protein_coding retained_intron MGP_WSBEiJ_T0009102.1 MGP_WSBEiJ_G0007324.1 mouse_genomes_project 9 59480333 59483007 + B930082K07Rik lincRNA lincRNA MGP_WSBEiJ_T0093655.1 MGP_WSBEiJ_G0034503.1 mouse_genomes_project 9 116054979 116081288 - MGP_WSBEiJ_P0093655 Cmtm7 protein_coding protein_coding MGP_WSBEiJ_T0093656.1 MGP_WSBEiJ_G0034503.1 mouse_genomes_project 9 116054979 116081288 - MGP_WSBEiJ_P0093656 Cmtm7 protein_coding protein_coding MGP_WSBEiJ_T0090024.1 MGP_WSBEiJ_G0033569.1 mouse_genomes_project 9 18222215 18257549 + MGP_WSBEiJ_P0090024 Slc44a2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090025.1 MGP_WSBEiJ_G0033569.1 mouse_genomes_project 9 18240353 18257542 + MGP_WSBEiJ_P0090025 Slc44a2 protein_coding protein_coding MGP_WSBEiJ_T0091300.1 MGP_WSBEiJ_G0034029.1 mouse_genomes_project 9 59580818 59673151 + MGP_WSBEiJ_P0091300 Uaca protein_coding protein_coding MGP_WSBEiJ_T0090645.1 MGP_WSBEiJ_G0033830.1 mouse_genomes_project 9 42580688 42610112 + MGP_WSBEiJ_P0090645 Bcl9l protein_coding unknown_likely_coding MGP_WSBEiJ_T0090986.1 MGP_WSBEiJ_G0033935.1 mouse_genomes_project 9 52367453 52367933 + MGP_WSBEiJ_P0090986 Gm16380 protein_coding protein_coding MGP_WSBEiJ_T0002394.1 MGP_WSBEiJ_G0002310.1 mouse_genomes_project 9 102476438 102481516 - TEC TEC MGP_WSBEiJ_T0015571.1 MGP_WSBEiJ_G0013701.1 mouse_genomes_project 9 81998915 81999666 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015512.1 MGP_WSBEiJ_G0013642.1 mouse_genomes_project 9 28365671 28366464 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091865.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678481 76712807 - protein_coding retained_intron MGP_WSBEiJ_T0091866.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678481 76931267 - MGP_WSBEiJ_P0091866 protein_coding protein_coding MGP_WSBEiJ_T0091867.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678481 76931260 - MGP_WSBEiJ_P0091867 protein_coding protein_coding MGP_WSBEiJ_T0091868.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678486 76931190 - MGP_WSBEiJ_P0091868 protein_coding protein_coding MGP_WSBEiJ_T0091869.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678486 76931198 - MGP_WSBEiJ_P0091869 protein_coding protein_coding MGP_WSBEiJ_T0091870.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678489 76834910 - MGP_WSBEiJ_P0091870 protein_coding protein_coding MGP_WSBEiJ_T0091871.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678489 76931313 - MGP_WSBEiJ_P0091871 protein_coding protein_coding MGP_WSBEiJ_T0091872.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678512 76712556 - MGP_WSBEiJ_P0091872 protein_coding protein_coding MGP_WSBEiJ_T0091873.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678710 76834956 - MGP_WSBEiJ_P0091873 protein_coding protein_coding MGP_WSBEiJ_T0091874.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76678791 76834872 - MGP_WSBEiJ_P0091874 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091875.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76738734 76931258 - MGP_WSBEiJ_P0091875 protein_coding protein_coding MGP_WSBEiJ_T0091876.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76808464 76931248 - MGP_WSBEiJ_P0091876 protein_coding protein_coding MGP_WSBEiJ_T0091877.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76808467 76834919 - MGP_WSBEiJ_P0091877 protein_coding protein_coding MGP_WSBEiJ_T0091878.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76808495 76924032 - MGP_WSBEiJ_P0091878 protein_coding protein_coding MGP_WSBEiJ_T0091879.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76832324 76835117 - protein_coding retained_intron MGP_WSBEiJ_T0091880.1 MGP_WSBEiJ_G0034167.1 mouse_genomes_project 9 76929840 76937329 - protein_coding processed_transcript MGP_WSBEiJ_T0092807.1 MGP_WSBEiJ_G0034364.1 mouse_genomes_project 9 107966783 107972725 + MGP_WSBEiJ_P0092807 Cish protein_coding protein_coding MGP_WSBEiJ_T0092808.1 MGP_WSBEiJ_G0034364.1 mouse_genomes_project 9 107967469 107973523 + MGP_WSBEiJ_P0092808 Cish protein_coding protein_coding MGP_WSBEiJ_T0092809.1 MGP_WSBEiJ_G0034364.1 mouse_genomes_project 9 107967666 107972681 + Cish protein_coding processed_transcript MGP_WSBEiJ_T0092810.1 MGP_WSBEiJ_G0034364.1 mouse_genomes_project 9 107967671 107971289 + MGP_WSBEiJ_P0092810 Cish protein_coding protein_coding MGP_WSBEiJ_T0092811.1 MGP_WSBEiJ_G0034364.1 mouse_genomes_project 9 107969893 107971196 + Cish protein_coding processed_transcript MGP_WSBEiJ_T0009129.1 MGP_WSBEiJ_G0007345.1 mouse_genomes_project 9 78970795 78971234 + Gm28620 lincRNA lincRNA MGP_WSBEiJ_T0092820.1 MGP_WSBEiJ_G0034366.1 mouse_genomes_project 9 108013219 108023344 + MGP_WSBEiJ_P0092820 6430571L13Rik protein_coding protein_coding MGP_WSBEiJ_T0092821.1 MGP_WSBEiJ_G0034366.1 mouse_genomes_project 9 108021806 108026852 + 6430571L13Rik protein_coding processed_transcript MGP_WSBEiJ_T0002415.1 MGP_WSBEiJ_G0002331.1 mouse_genomes_project 9 109213234 109214249 + TEC TEC MGP_WSBEiJ_T0091134.1 MGP_WSBEiJ_G0033981.1 mouse_genomes_project 9 56007607 56033803 - MGP_WSBEiJ_P0091134 Ppcdc protein_coding unknown_likely_coding MGP_WSBEiJ_T0015550.1 MGP_WSBEiJ_G0013680.1 mouse_genomes_project 9 72491152 72491459 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093763.1 MGP_WSBEiJ_G0034536.1 mouse_genomes_project 9 121519459 121549600 + MGP_WSBEiJ_P0093763 Ttc21a protein_coding protein_coding MGP_WSBEiJ_T0093764.1 MGP_WSBEiJ_G0034536.1 mouse_genomes_project 9 121519488 121548859 + Ttc21a protein_coding retained_intron MGP_WSBEiJ_T0093765.1 MGP_WSBEiJ_G0034536.1 mouse_genomes_project 9 121519489 121544479 + Ttc21a protein_coding retained_intron MGP_WSBEiJ_T0093766.1 MGP_WSBEiJ_G0034536.1 mouse_genomes_project 9 121543420 121547975 + Ttc21a protein_coding retained_intron MGP_WSBEiJ_T0091834.1 MGP_WSBEiJ_G0034153.1 mouse_genomes_project 9 74829315 74833185 + MGP_WSBEiJ_P0091834 Bcl2l10 protein_coding protein_coding MGP_WSBEiJ_T0090789.1 MGP_WSBEiJ_G0033870.1 mouse_genomes_project 9 44475522 44484672 + MGP_WSBEiJ_P0090789 Zpr1 protein_coding protein_coding MGP_WSBEiJ_T0090790.1 MGP_WSBEiJ_G0033870.1 mouse_genomes_project 9 44475522 44485831 + MGP_WSBEiJ_P0090790 Zpr1 protein_coding protein_coding MGP_WSBEiJ_T0090791.1 MGP_WSBEiJ_G0033870.1 mouse_genomes_project 9 44475614 44478115 + MGP_WSBEiJ_P0090791 Zpr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090792.1 MGP_WSBEiJ_G0033870.1 mouse_genomes_project 9 44475957 44479063 + Zpr1 protein_coding retained_intron MGP_WSBEiJ_T0090793.1 MGP_WSBEiJ_G0033870.1 mouse_genomes_project 9 44477782 44478935 + Zpr1 protein_coding retained_intron MGP_WSBEiJ_T0090794.1 MGP_WSBEiJ_G0033870.1 mouse_genomes_project 9 44478459 44479982 + Zpr1 protein_coding retained_intron MGP_WSBEiJ_T0090451.1 MGP_WSBEiJ_G0033736.1 mouse_genomes_project 9 36559888 36560815 + MGP_WSBEiJ_P0090451 protein_coding protein_coding MGP_WSBEiJ_T0090390.1 MGP_WSBEiJ_G0033687.1 mouse_genomes_project 9 35098343 35103278 + MGP_WSBEiJ_P0090390 Vsig2 protein_coding protein_coding MGP_WSBEiJ_T0099850.1 MGP_WSBEiJ_G0038513.1 mouse_genomes_project 9 42487502 42487621 - Gm26306 snoRNA snoRNA MGP_WSBEiJ_T0093050.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108757700 108791875 - MGP_WSBEiJ_P0093050 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0093051.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108757832 108787830 - MGP_WSBEiJ_P0093051 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0093052.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108757837 108788269 - Rnf123 protein_coding retained_intron MGP_WSBEiJ_T0093053.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108757837 108787904 - MGP_WSBEiJ_P0093053 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0093054.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108757837 108787830 - MGP_WSBEiJ_P0093054 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0093055.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108757853 108758391 - Rnf123 protein_coding retained_intron MGP_WSBEiJ_T0093056.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108758385 108765904 - MGP_WSBEiJ_P0093056 Rnf123 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093057.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108758394 108787904 - MGP_WSBEiJ_P0093057 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0093058.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108758402 108758860 - Rnf123 protein_coding retained_intron MGP_WSBEiJ_T0093060.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108762064 108788257 - Rnf123 protein_coding retained_intron MGP_WSBEiJ_T0093061.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108762231 108763205 - Rnf123 protein_coding retained_intron MGP_WSBEiJ_T0093062.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108762725 108765939 - MGP_WSBEiJ_P0093062 Rnf123 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093063.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108764333 108768163 - Rnf123 protein_coding retained_intron MGP_WSBEiJ_T0093064.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108779634 108786796 - MGP_WSBEiJ_P0093064 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0093065.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108779693 108787834 - MGP_WSBEiJ_P0093065 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0093066.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108779920 108787795 - MGP_WSBEiJ_P0093066 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0093067.1 MGP_WSBEiJ_G0034398.1 mouse_genomes_project 9 108786248 108791873 - MGP_WSBEiJ_P0093067 Rnf123 protein_coding protein_coding MGP_WSBEiJ_T0089726.1 MGP_WSBEiJ_G0033453.1 mouse_genomes_project 9 4534640 4542191 + MGP_WSBEiJ_P0089726 Mmp7 protein_coding protein_coding MGP_WSBEiJ_T0091341.1 MGP_WSBEiJ_G0034038.1 mouse_genomes_project 9 61299718 61413068 - MGP_WSBEiJ_P0091341 Coro2b protein_coding protein_coding MGP_WSBEiJ_T0091342.1 MGP_WSBEiJ_G0034038.1 mouse_genomes_project 9 61305777 61308191 - MGP_WSBEiJ_P0091342 Coro2b protein_coding protein_coding MGP_WSBEiJ_T0091343.1 MGP_WSBEiJ_G0034038.1 mouse_genomes_project 9 61308125 61386751 - MGP_WSBEiJ_P0091343 Coro2b protein_coding protein_coding MGP_WSBEiJ_T0091344.1 MGP_WSBEiJ_G0034038.1 mouse_genomes_project 9 61308452 61309443 - Coro2b protein_coding retained_intron MGP_WSBEiJ_T0091345.1 MGP_WSBEiJ_G0034038.1 mouse_genomes_project 9 61309526 61321985 - MGP_WSBEiJ_P0091345 Coro2b protein_coding protein_coding MGP_WSBEiJ_T0091346.1 MGP_WSBEiJ_G0034038.1 mouse_genomes_project 9 61312681 61396530 - MGP_WSBEiJ_P0091346 Coro2b protein_coding protein_coding MGP_WSBEiJ_T0091347.1 MGP_WSBEiJ_G0034038.1 mouse_genomes_project 9 61325756 61412984 - Coro2b protein_coding retained_intron MGP_WSBEiJ_T0009101.1 MGP_WSBEiJ_G0007323.1 mouse_genomes_project 9 57135700 57151248 + 4930461G14Rik lincRNA lincRNA MGP_WSBEiJ_T0089901.1 MGP_WSBEiJ_G0033515.1 mouse_genomes_project 9 16113921 16115028 - MGP_WSBEiJ_P0089901 Olfr843 protein_coding protein_coding MGP_WSBEiJ_T0009120.1 MGP_WSBEiJ_G0007337.1 mouse_genomes_project 9 72632744 72704849 + Gm27211 lincRNA lincRNA MGP_WSBEiJ_T0015611.1 MGP_WSBEiJ_G0013741.1 mouse_genomes_project 9 97434447 97436284 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092412.1 MGP_WSBEiJ_G0034289.1 mouse_genomes_project 9 100011939 100033585 - MGP_WSBEiJ_P0092412 Cldn18 protein_coding protein_coding MGP_WSBEiJ_T0092413.1 MGP_WSBEiJ_G0034289.1 mouse_genomes_project 9 100014298 100040769 - MGP_WSBEiJ_P0092413 Cldn18 protein_coding protein_coding MGP_WSBEiJ_T0092414.1 MGP_WSBEiJ_G0034289.1 mouse_genomes_project 9 100014660 100033531 - MGP_WSBEiJ_P0092414 Cldn18 protein_coding protein_coding MGP_WSBEiJ_T0092415.1 MGP_WSBEiJ_G0034289.1 mouse_genomes_project 9 100015200 100040769 - MGP_WSBEiJ_P0092415 Cldn18 protein_coding protein_coding MGP_WSBEiJ_T0098639.1 MGP_WSBEiJ_G0037302.1 mouse_genomes_project 9 107779508 107779615 + Gm22454 snRNA snRNA MGP_WSBEiJ_T0005388.1 MGP_WSBEiJ_G0004553.1 mouse_genomes_project 9 65948839 65949683 + Gm17098 antisense antisense MGP_WSBEiJ_T0090414.1 MGP_WSBEiJ_G0033705.1 mouse_genomes_project 9 35737917 35738862 + MGP_WSBEiJ_P0090414 Olfr888 protein_coding protein_coding MGP_WSBEiJ_T0092590.1 MGP_WSBEiJ_G0034324.1 mouse_genomes_project 9 105074512 105425016 + MGP_WSBEiJ_P0092590 Cpne4 protein_coding protein_coding MGP_WSBEiJ_T0092591.1 MGP_WSBEiJ_G0034324.1 mouse_genomes_project 9 105093441 105424768 + MGP_WSBEiJ_P0092591 Cpne4 protein_coding protein_coding MGP_WSBEiJ_T0092592.1 MGP_WSBEiJ_G0034324.1 mouse_genomes_project 9 105096216 105591119 + MGP_WSBEiJ_P0092592 Cpne4 protein_coding protein_coding MGP_WSBEiJ_T0092593.1 MGP_WSBEiJ_G0034324.1 mouse_genomes_project 9 105096520 105591119 + MGP_WSBEiJ_P0092593 Cpne4 protein_coding protein_coding MGP_WSBEiJ_T0091445.1 MGP_WSBEiJ_G0034068.1 mouse_genomes_project 9 64229096 64253581 + MGP_WSBEiJ_P0091445 Parp16 protein_coding protein_coding MGP_WSBEiJ_T0015509.1 MGP_WSBEiJ_G0013639.1 mouse_genomes_project 9 21876950 21877953 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090417.1 MGP_WSBEiJ_G0033708.1 mouse_genomes_project 9 35819481 35820430 + MGP_WSBEiJ_P0090417 Olfr894 protein_coding protein_coding MGP_WSBEiJ_T0015586.1 MGP_WSBEiJ_G0013716.1 mouse_genomes_project 9 88229241 88230063 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090236.1 MGP_WSBEiJ_G0033644.1 mouse_genomes_project 9 29775462 29896618 - MGP_WSBEiJ_P0090236 Fli1 protein_coding protein_coding MGP_WSBEiJ_T0090237.1 MGP_WSBEiJ_G0033644.1 mouse_genomes_project 9 29781317 29897898 - MGP_WSBEiJ_P0090237 Fli1 protein_coding protein_coding MGP_WSBEiJ_T0092295.1 MGP_WSBEiJ_G0034261.1 mouse_genomes_project 9 96729071 96823155 - MGP_WSBEiJ_P0092295 Rasa2 protein_coding protein_coding MGP_WSBEiJ_T0092296.1 MGP_WSBEiJ_G0034261.1 mouse_genomes_project 9 96732074 96734921 - Rasa2 protein_coding retained_intron MGP_WSBEiJ_T0092297.1 MGP_WSBEiJ_G0034261.1 mouse_genomes_project 9 96736023 96823074 - MGP_WSBEiJ_P0092297 Rasa2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092298.1 MGP_WSBEiJ_G0034261.1 mouse_genomes_project 9 96748937 96764161 - Rasa2 protein_coding retained_intron MGP_WSBEiJ_T0092299.1 MGP_WSBEiJ_G0034261.1 mouse_genomes_project 9 96749644 96756222 - Rasa2 protein_coding retained_intron MGP_WSBEiJ_T0092300.1 MGP_WSBEiJ_G0034261.1 mouse_genomes_project 9 96764005 96772011 - Rasa2 protein_coding retained_intron MGP_WSBEiJ_T0009189.1 MGP_WSBEiJ_G0007391.1 mouse_genomes_project 9 111622116 111622893 + Gm42470 lincRNA lincRNA MGP_WSBEiJ_T0093861.1 MGP_WSBEiJ_G0034565.1 mouse_genomes_project 9 123662098 123691135 + MGP_WSBEiJ_P0093861 Fam198a protein_coding protein_coding MGP_WSBEiJ_T0005468.1 MGP_WSBEiJ_G0004610.1 mouse_genomes_project 9 110307514 110325521 + antisense antisense MGP_WSBEiJ_T0089870.1 MGP_WSBEiJ_G0033496.1 mouse_genomes_project 9 12749518 13232159 - MGP_WSBEiJ_P0089870 Fat3 protein_coding protein_coding MGP_WSBEiJ_T0093673.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 117969377 118700350 - MGP_WSBEiJ_P0093673 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093674.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 117973931 118700366 - MGP_WSBEiJ_P0093674 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093675.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 117974214 118234783 - MGP_WSBEiJ_P0093675 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093676.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 117974650 118700012 - MGP_WSBEiJ_P0093676 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093677.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 117974650 119104985 - MGP_WSBEiJ_P0093677 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093678.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 117974651 118700003 - MGP_WSBEiJ_P0093678 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093679.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 117975141 118700370 - MGP_WSBEiJ_P0093679 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093680.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 117979507 118234796 - MGP_WSBEiJ_P0093680 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093681.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 118082271 118700369 - Rbms3 protein_coding retained_intron MGP_WSBEiJ_T0093682.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 118216384 118699693 - MGP_WSBEiJ_P0093682 Rbms3 protein_coding protein_coding MGP_WSBEiJ_T0093683.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 118262716 118700366 - Rbms3 protein_coding processed_transcript MGP_WSBEiJ_T0093684.1 MGP_WSBEiJ_G0034510.1 mouse_genomes_project 9 118374951 118699489 - Rbms3 protein_coding processed_transcript MGP_WSBEiJ_T0091991.1 MGP_WSBEiJ_G0034199.1 mouse_genomes_project 9 82621744 82640403 + MGP_WSBEiJ_P0091991 Irak1bp1 protein_coding protein_coding MGP_WSBEiJ_T0091992.1 MGP_WSBEiJ_G0034199.1 mouse_genomes_project 9 82622010 82639736 + MGP_WSBEiJ_P0091992 Irak1bp1 protein_coding protein_coding MGP_WSBEiJ_T0005368.1 MGP_WSBEiJ_G0004541.1 mouse_genomes_project 9 52148276 52162294 + Gm16124 antisense antisense MGP_WSBEiJ_T0015617.1 MGP_WSBEiJ_G0013747.1 mouse_genomes_project 9 100987105 100988097 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091788.1 MGP_WSBEiJ_G0034143.1 mouse_genomes_project 9 72535590 72553211 + MGP_WSBEiJ_P0091788 Gm20509 protein_coding protein_coding MGP_WSBEiJ_T0002359.1 MGP_WSBEiJ_G0002275.1 mouse_genomes_project 9 87667719 87670519 + TEC TEC MGP_WSBEiJ_T0089868.1 MGP_WSBEiJ_G0033495.1 mouse_genomes_project 9 12655036 12705406 - MGP_WSBEiJ_P0089868 Mtnr1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089869.1 MGP_WSBEiJ_G0033495.1 mouse_genomes_project 9 12691859 12705310 - MGP_WSBEiJ_P0089869 Mtnr1b protein_coding protein_coding MGP_WSBEiJ_T0015599.1 MGP_WSBEiJ_G0013729.1 mouse_genomes_project 9 93462649 93463652 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093908.1 MGP_WSBEiJ_G0034581.1 mouse_genomes_project 9 124870622 124897506 + MGP_WSBEiJ_P0093908 Exosc7 protein_coding protein_coding MGP_WSBEiJ_T0093909.1 MGP_WSBEiJ_G0034581.1 mouse_genomes_project 9 124870665 124877033 + Exosc7 protein_coding retained_intron MGP_WSBEiJ_T0093910.1 MGP_WSBEiJ_G0034581.1 mouse_genomes_project 9 124887734 124892304 + Exosc7 protein_coding processed_transcript MGP_WSBEiJ_T0099892.1 MGP_WSBEiJ_G0038555.1 mouse_genomes_project 9 113591441 113591574 + Gm24957 snoRNA snoRNA MGP_WSBEiJ_T0089828.1 MGP_WSBEiJ_G0033483.1 mouse_genomes_project 9 11642882 11654923 + MGP_WSBEiJ_P0089828 Gpr83 protein_coding protein_coding MGP_WSBEiJ_T0089829.1 MGP_WSBEiJ_G0033483.1 mouse_genomes_project 9 11642926 11654444 + MGP_WSBEiJ_P0089829 Gpr83 protein_coding protein_coding MGP_WSBEiJ_T0089830.1 MGP_WSBEiJ_G0033483.1 mouse_genomes_project 9 11647992 11654923 + Gpr83 protein_coding retained_intron MGP_WSBEiJ_T0091462.1 MGP_WSBEiJ_G0034077.1 mouse_genomes_project 9 64493208 64521142 + MGP_WSBEiJ_P0091462 Spg21 protein_coding unknown_likely_coding MGP_WSBEiJ_T0098616.1 MGP_WSBEiJ_G0037279.1 mouse_genomes_project 9 71473989 71474088 - Gm25045 snRNA snRNA MGP_WSBEiJ_T0092171.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90053158 90080177 - protein_coding retained_intron MGP_WSBEiJ_T0092172.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90055037 90080112 - MGP_WSBEiJ_P0092172 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092173.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90055121 90079826 - protein_coding processed_transcript MGP_WSBEiJ_T0092174.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90057915 90060885 - protein_coding retained_intron MGP_WSBEiJ_T0092175.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90062550 90063457 - protein_coding retained_intron MGP_WSBEiJ_T0092176.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90062975 90080196 - MGP_WSBEiJ_P0092176 protein_coding protein_coding MGP_WSBEiJ_T0092177.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90063453 90080066 - protein_coding processed_transcript MGP_WSBEiJ_T0092178.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90063453 90080235 - MGP_WSBEiJ_P0092178 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092179.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90067488 90080147 - protein_coding retained_intron MGP_WSBEiJ_T0092180.1 MGP_WSBEiJ_G0034236.1 mouse_genomes_project 9 90073185 90080120 - protein_coding retained_intron MGP_WSBEiJ_T0090626.1 MGP_WSBEiJ_G0033820.1 mouse_genomes_project 9 42427276 42429463 + MGP_WSBEiJ_P0090626 H2afx protein_coding protein_coding MGP_WSBEiJ_T0090146.1 MGP_WSBEiJ_G0033617.1 mouse_genomes_project 9 22555425 22678095 + MGP_WSBEiJ_P0090146 Eepd1 protein_coding protein_coding MGP_WSBEiJ_T0090147.1 MGP_WSBEiJ_G0033617.1 mouse_genomes_project 9 22556751 22561185 + Eepd1 protein_coding processed_transcript MGP_WSBEiJ_T0090106.1 MGP_WSBEiJ_G0033599.1 mouse_genomes_project 9 19145296 19146809 + MGP_WSBEiJ_P0090106 Pigyl protein_coding protein_coding MGP_WSBEiJ_T0090107.1 MGP_WSBEiJ_G0033599.1 mouse_genomes_project 9 19145396 19146776 + MGP_WSBEiJ_P0090107 Pigyl protein_coding protein_coding MGP_WSBEiJ_T0092756.1 MGP_WSBEiJ_G0034354.1 mouse_genomes_project 9 107217517 107222939 - MGP_WSBEiJ_P0092756 Iqcf4 protein_coding protein_coding MGP_WSBEiJ_T0015519.1 MGP_WSBEiJ_G0013649.1 mouse_genomes_project 9 32991589 32991859 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092547.1 MGP_WSBEiJ_G0034317.1 mouse_genomes_project 9 104492361 104531314 + Nphp3 protein_coding retained_intron MGP_WSBEiJ_T0092548.1 MGP_WSBEiJ_G0034317.1 mouse_genomes_project 9 104492363 104535371 + MGP_WSBEiJ_P0092548 Nphp3 protein_coding protein_coding MGP_WSBEiJ_T0092549.1 MGP_WSBEiJ_G0034317.1 mouse_genomes_project 9 104492471 104534662 + MGP_WSBEiJ_P0092549 Nphp3 protein_coding protein_coding MGP_WSBEiJ_T0092550.1 MGP_WSBEiJ_G0034317.1 mouse_genomes_project 9 104492471 104662635 + MGP_WSBEiJ_P0092550 Nphp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092551.1 MGP_WSBEiJ_G0034317.1 mouse_genomes_project 9 104492575 104506987 + Nphp3 protein_coding retained_intron MGP_WSBEiJ_T0092552.1 MGP_WSBEiJ_G0034317.1 mouse_genomes_project 9 104492584 104533872 + MGP_WSBEiJ_P0092552 Nphp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092553.1 MGP_WSBEiJ_G0034317.1 mouse_genomes_project 9 104523447 104526002 + Nphp3 protein_coding retained_intron MGP_WSBEiJ_T0092554.1 MGP_WSBEiJ_G0034317.1 mouse_genomes_project 9 104527427 104530119 + MGP_WSBEiJ_P0092554 Nphp3 protein_coding protein_coding MGP_WSBEiJ_T0091557.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143481 66170210 - MGP_WSBEiJ_P0091557 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091558.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143481 66170349 - MGP_WSBEiJ_P0091558 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091559.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143481 66164807 - MGP_WSBEiJ_P0091559 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091560.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143483 66164702 - MGP_WSBEiJ_P0091560 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091561.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143484 66170152 - MGP_WSBEiJ_P0091561 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091562.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143484 66164862 - MGP_WSBEiJ_P0091562 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091563.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143497 66170144 - MGP_WSBEiJ_P0091563 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091564.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143497 66170129 - MGP_WSBEiJ_P0091564 Tpm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091565.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143506 66170218 - MGP_WSBEiJ_P0091565 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091566.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66143513 66164678 - MGP_WSBEiJ_P0091566 Tpm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091567.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66145213 66170115 - MGP_WSBEiJ_P0091567 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091568.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66145215 66164606 - MGP_WSBEiJ_P0091568 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091569.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66148770 66170207 - MGP_WSBEiJ_P0091569 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091570.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66148770 66170156 - MGP_WSBEiJ_P0091570 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091571.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66148844 66164741 - MGP_WSBEiJ_P0091571 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091572.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66148867 66170086 - MGP_WSBEiJ_P0091572 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091573.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66148926 66164630 - MGP_WSBEiJ_P0091573 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091574.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66149726 66170205 - MGP_WSBEiJ_P0091574 Tpm1 protein_coding protein_coding MGP_WSBEiJ_T0091575.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66150798 66153737 - Tpm1 protein_coding processed_transcript MGP_WSBEiJ_T0091576.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66153131 66170061 - Tpm1 protein_coding retained_intron MGP_WSBEiJ_T0091577.1 MGP_WSBEiJ_G0034101.1 mouse_genomes_project 9 66154689 66170134 - Tpm1 protein_coding processed_transcript MGP_WSBEiJ_T0091435.1 MGP_WSBEiJ_G0034062.1 mouse_genomes_project 9 63919074 63947818 - MGP_WSBEiJ_P0091435 Slc24a1 protein_coding protein_coding MGP_WSBEiJ_T0089753.1 MGP_WSBEiJ_G0033459.1 mouse_genomes_project 9 4964601 5023392 - MGP_WSBEiJ_P0089753 Cep126 protein_coding protein_coding MGP_WSBEiJ_T0089754.1 MGP_WSBEiJ_G0033459.1 mouse_genomes_project 9 4966216 5023308 - MGP_WSBEiJ_P0089754 Cep126 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093299.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109725831 109768867 + MGP_WSBEiJ_P0093299 Pfkfb4 protein_coding protein_coding MGP_WSBEiJ_T0093300.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109725955 109768867 + MGP_WSBEiJ_P0093300 Pfkfb4 protein_coding protein_coding MGP_WSBEiJ_T0093301.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109726001 109733338 + Pfkfb4 protein_coding retained_intron MGP_WSBEiJ_T0093302.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109726045 109726955 + Pfkfb4 protein_coding retained_intron MGP_WSBEiJ_T0093303.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109726069 109767351 + Pfkfb4 protein_coding retained_intron MGP_WSBEiJ_T0093304.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109726069 109767351 + MGP_WSBEiJ_P0093304 Pfkfb4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093305.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109726069 109767351 + MGP_WSBEiJ_P0093305 Pfkfb4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093306.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109732956 109749369 + Pfkfb4 protein_coding processed_transcript MGP_WSBEiJ_T0093307.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109749896 109765534 + MGP_WSBEiJ_P0093307 Pfkfb4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093308.1 MGP_WSBEiJ_G0034435.1 mouse_genomes_project 9 109756069 109768836 + Pfkfb4 protein_coding processed_transcript MGP_WSBEiJ_T0093862.1 MGP_WSBEiJ_G0034566.1 mouse_genomes_project 9 123692532 123706949 - MGP_WSBEiJ_P0093862 Pomgnt2 protein_coding protein_coding MGP_WSBEiJ_T0005445.1 MGP_WSBEiJ_G0004592.1 mouse_genomes_project 9 106876290 106879255 + antisense antisense MGP_WSBEiJ_T0002370.1 MGP_WSBEiJ_G0002286.1 mouse_genomes_project 9 91802616 91803441 - TEC TEC MGP_WSBEiJ_T0089891.1 MGP_WSBEiJ_G0033505.1 mouse_genomes_project 9 15329263 15340422 - MGP_WSBEiJ_P0089891 protein_coding protein_coding MGP_WSBEiJ_T0017954.1 MGP_WSBEiJ_G0015169.1 mouse_genomes_project 9 85733239 85759988 - 9330154J02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017955.1 MGP_WSBEiJ_G0015169.1 mouse_genomes_project 9 85733239 85760834 - 9330154J02Rik processed_transcript antisense MGP_WSBEiJ_T0017956.1 MGP_WSBEiJ_G0015169.1 mouse_genomes_project 9 85733300 85761026 - 9330154J02Rik processed_transcript antisense MGP_WSBEiJ_T0017957.1 MGP_WSBEiJ_G0015169.1 mouse_genomes_project 9 85734525 85759987 - 9330154J02Rik processed_transcript retained_intron MGP_WSBEiJ_T0002383.1 MGP_WSBEiJ_G0002299.1 mouse_genomes_project 9 101035181 101039453 + TEC TEC MGP_WSBEiJ_T0093700.1 MGP_WSBEiJ_G0034515.1 mouse_genomes_project 9 120006898 120087466 + MGP_WSBEiJ_P0093700 Golga4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093701.1 MGP_WSBEiJ_G0034515.1 mouse_genomes_project 9 120006932 120087461 + MGP_WSBEiJ_P0093701 Golga4 protein_coding protein_coding MGP_WSBEiJ_T0093080.1 MGP_WSBEiJ_G0034402.1 mouse_genomes_project 9 108804572 108912155 - MGP_WSBEiJ_P0093080 Bsn protein_coding protein_coding MGP_WSBEiJ_T0093081.1 MGP_WSBEiJ_G0034402.1 mouse_genomes_project 9 108804573 108818846 - MGP_WSBEiJ_P0093081 Bsn protein_coding protein_coding MGP_WSBEiJ_T0090612.1 MGP_WSBEiJ_G0033815.1 mouse_genomes_project 9 42335853 42351488 - MGP_WSBEiJ_P0090612 Nlrx1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092496.1 MGP_WSBEiJ_G0034305.1 mouse_genomes_project 9 103180094 103200832 + MGP_WSBEiJ_P0092496 Gm5627 protein_coding protein_coding MGP_WSBEiJ_T0090372.1 MGP_WSBEiJ_G0033681.1 mouse_genomes_project 9 34821148 34892187 - MGP_WSBEiJ_P0090372 Ccdc15 protein_coding protein_coding MGP_WSBEiJ_T0009119.1 MGP_WSBEiJ_G0007336.1 mouse_genomes_project 9 72181519 72183679 - Gm27204 lincRNA lincRNA MGP_WSBEiJ_T0089895.1 MGP_WSBEiJ_G0033509.1 mouse_genomes_project 9 15747943 15748891 + MGP_WSBEiJ_P0089895 Olfr830 protein_coding protein_coding MGP_WSBEiJ_T0093089.1 MGP_WSBEiJ_G0034404.1 mouse_genomes_project 9 109017633 109023084 + MGP_WSBEiJ_P0093089 Nicn1 protein_coding protein_coding MGP_WSBEiJ_T0093090.1 MGP_WSBEiJ_G0034404.1 mouse_genomes_project 9 109017648 109020124 + Nicn1 protein_coding retained_intron MGP_WSBEiJ_T0093091.1 MGP_WSBEiJ_G0034404.1 mouse_genomes_project 9 109017659 109020092 + Nicn1 protein_coding processed_transcript MGP_WSBEiJ_T0093092.1 MGP_WSBEiJ_G0034404.1 mouse_genomes_project 9 109020434 109021366 + Nicn1 protein_coding retained_intron MGP_WSBEiJ_T0093625.1 MGP_WSBEiJ_G0034488.1 mouse_genomes_project 9 114784911 114845471 - MGP_WSBEiJ_P0093625 Pdcd6ip protein_coding protein_coding MGP_WSBEiJ_T0093626.1 MGP_WSBEiJ_G0034488.1 mouse_genomes_project 9 114787638 114845456 - MGP_WSBEiJ_P0093626 Pdcd6ip protein_coding protein_coding MGP_WSBEiJ_T0093627.1 MGP_WSBEiJ_G0034488.1 mouse_genomes_project 9 114788699 114790424 - Pdcd6ip protein_coding retained_intron MGP_WSBEiJ_T0093628.1 MGP_WSBEiJ_G0034488.1 mouse_genomes_project 9 114792752 114795532 - Pdcd6ip protein_coding retained_intron MGP_WSBEiJ_T0093629.1 MGP_WSBEiJ_G0034488.1 mouse_genomes_project 9 114807579 114819741 - Pdcd6ip protein_coding processed_transcript MGP_WSBEiJ_T0093630.1 MGP_WSBEiJ_G0034488.1 mouse_genomes_project 9 114821838 114834792 - Pdcd6ip protein_coding retained_intron MGP_WSBEiJ_T0090646.1 MGP_WSBEiJ_G0033831.1 mouse_genomes_project 9 42609993 42625484 - MGP_WSBEiJ_P0090646 Cxcr5 protein_coding protein_coding MGP_WSBEiJ_T0090647.1 MGP_WSBEiJ_G0033831.1 mouse_genomes_project 9 42609993 42660679 - MGP_WSBEiJ_P0090647 Cxcr5 protein_coding protein_coding MGP_WSBEiJ_T0090624.1 MGP_WSBEiJ_G0033818.1 mouse_genomes_project 9 42398981 42411321 - MGP_WSBEiJ_P0090624 C2cd2l protein_coding protein_coding MGP_WSBEiJ_T0090187.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26208033 27194913 - MGP_WSBEiJ_P0090187 Ntm protein_coding protein_coding MGP_WSBEiJ_T0090188.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26209275 26635069 - MGP_WSBEiJ_P0090188 Ntm protein_coding protein_coding MGP_WSBEiJ_T0090189.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26209495 26228963 - MGP_WSBEiJ_P0090189 Ntm protein_coding protein_coding MGP_WSBEiJ_T0090190.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26209757 26228963 - MGP_WSBEiJ_P0090190 Ntm protein_coding protein_coding MGP_WSBEiJ_T0090191.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26223803 26634601 - MGP_WSBEiJ_P0090191 Ntm protein_coding protein_coding MGP_WSBEiJ_T0090192.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26223929 26405273 - Ntm protein_coding processed_transcript MGP_WSBEiJ_T0090193.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26223952 26328950 - Ntm protein_coding processed_transcript MGP_WSBEiJ_T0090194.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26227941 27194914 - Ntm protein_coding retained_intron MGP_WSBEiJ_T0090195.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26396062 27194914 - Ntm protein_coding retained_intron MGP_WSBEiJ_T0090196.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 26634452 27194903 - Ntm protein_coding processed_transcript MGP_WSBEiJ_T0090197.1 MGP_WSBEiJ_G0033630.1 mouse_genomes_project 9 27173620 27194925 - Ntm protein_coding processed_transcript MGP_WSBEiJ_T0090863.1 MGP_WSBEiJ_G0033902.1 mouse_genomes_project 9 48999752 49006663 + MGP_WSBEiJ_P0090863 Pih1d2 protein_coding protein_coding MGP_WSBEiJ_T0090864.1 MGP_WSBEiJ_G0033902.1 mouse_genomes_project 9 48999764 49004961 + Pih1d2 protein_coding retained_intron MGP_WSBEiJ_T0090865.1 MGP_WSBEiJ_G0033902.1 mouse_genomes_project 9 48999768 49004210 + MGP_WSBEiJ_P0090865 Pih1d2 protein_coding protein_coding MGP_WSBEiJ_T0090866.1 MGP_WSBEiJ_G0033902.1 mouse_genomes_project 9 48999814 49006666 + MGP_WSBEiJ_P0090866 Pih1d2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090867.1 MGP_WSBEiJ_G0033902.1 mouse_genomes_project 9 48999952 49001249 + Pih1d2 protein_coding retained_intron MGP_WSBEiJ_T0090868.1 MGP_WSBEiJ_G0033902.1 mouse_genomes_project 9 48999981 49003622 + MGP_WSBEiJ_P0090868 Pih1d2 protein_coding protein_coding MGP_WSBEiJ_T0090869.1 MGP_WSBEiJ_G0033902.1 mouse_genomes_project 9 49000438 49003497 + MGP_WSBEiJ_P0090869 Pih1d2 protein_coding protein_coding MGP_WSBEiJ_T0090341.1 MGP_WSBEiJ_G0033676.1 mouse_genomes_project 9 34279184 34297576 - MGP_WSBEiJ_P0090341 Ei24 protein_coding protein_coding MGP_WSBEiJ_T0090342.1 MGP_WSBEiJ_G0033676.1 mouse_genomes_project 9 34279184 34297493 - MGP_WSBEiJ_P0090342 Ei24 protein_coding protein_coding MGP_WSBEiJ_T0090343.1 MGP_WSBEiJ_G0033676.1 mouse_genomes_project 9 34279903 34283236 - Ei24 protein_coding retained_intron MGP_WSBEiJ_T0090344.1 MGP_WSBEiJ_G0033676.1 mouse_genomes_project 9 34280202 34282741 - Ei24 protein_coding retained_intron MGP_WSBEiJ_T0090345.1 MGP_WSBEiJ_G0033676.1 mouse_genomes_project 9 34282804 34286046 - Ei24 protein_coding retained_intron MGP_WSBEiJ_T0090346.1 MGP_WSBEiJ_G0033676.1 mouse_genomes_project 9 34285637 34297240 - MGP_WSBEiJ_P0090346 Ei24 protein_coding protein_coding MGP_WSBEiJ_T0090347.1 MGP_WSBEiJ_G0033676.1 mouse_genomes_project 9 34285646 34290308 - MGP_WSBEiJ_P0090347 Ei24 protein_coding protein_coding MGP_WSBEiJ_T0090348.1 MGP_WSBEiJ_G0033676.1 mouse_genomes_project 9 34286555 34297581 - MGP_WSBEiJ_P0090348 Ei24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002423.1 MGP_WSBEiJ_G0002339.1 mouse_genomes_project 9 111283157 111285744 - TEC TEC MGP_WSBEiJ_T0093657.1 MGP_WSBEiJ_G0034504.1 mouse_genomes_project 9 116088646 116154172 - MGP_WSBEiJ_P0093657 Cmtm8 protein_coding protein_coding MGP_WSBEiJ_T0098609.1 MGP_WSBEiJ_G0037272.1 mouse_genomes_project 9 65449036 65449138 - Gm23428 snRNA snRNA MGP_WSBEiJ_T0091408.1 MGP_WSBEiJ_G0034058.1 mouse_genomes_project 9 63268928 63310044 - MGP_WSBEiJ_P0091408 Dis3l protein_coding protein_coding MGP_WSBEiJ_T0091409.1 MGP_WSBEiJ_G0034058.1 mouse_genomes_project 9 63268929 63310075 - MGP_WSBEiJ_P0091409 Dis3l protein_coding protein_coding MGP_WSBEiJ_T0091410.1 MGP_WSBEiJ_G0034058.1 mouse_genomes_project 9 63269182 63309954 - MGP_WSBEiJ_P0091410 Dis3l protein_coding protein_coding MGP_WSBEiJ_T0091411.1 MGP_WSBEiJ_G0034058.1 mouse_genomes_project 9 63269182 63309258 - MGP_WSBEiJ_P0091411 Dis3l protein_coding protein_coding MGP_WSBEiJ_T0091412.1 MGP_WSBEiJ_G0034058.1 mouse_genomes_project 9 63286844 63309957 - Dis3l protein_coding retained_intron MGP_WSBEiJ_T0091413.1 MGP_WSBEiJ_G0034058.1 mouse_genomes_project 9 63298344 63305423 - MGP_WSBEiJ_P0091413 Dis3l protein_coding protein_coding MGP_WSBEiJ_T0091414.1 MGP_WSBEiJ_G0034058.1 mouse_genomes_project 9 63305458 63309564 - Dis3l protein_coding processed_transcript MGP_WSBEiJ_T0091415.1 MGP_WSBEiJ_G0034058.1 mouse_genomes_project 9 63308237 63310044 - Dis3l protein_coding retained_intron MGP_WSBEiJ_T0091756.1 MGP_WSBEiJ_G0034136.1 mouse_genomes_project 9 72385368 72399572 + MGP_WSBEiJ_P0091756 Dyx1c1 protein_coding protein_coding MGP_WSBEiJ_T0091757.1 MGP_WSBEiJ_G0034136.1 mouse_genomes_project 9 72385368 72399575 + MGP_WSBEiJ_P0091757 Dyx1c1 protein_coding protein_coding MGP_WSBEiJ_T0017926.1 MGP_WSBEiJ_G0015156.1 mouse_genomes_project 9 42182381 42184041 - Gm20444 processed_transcript processed_transcript MGP_WSBEiJ_T0015580.1 MGP_WSBEiJ_G0013710.1 mouse_genomes_project 9 86239447 86239991 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090829.1 MGP_WSBEiJ_G0033885.1 mouse_genomes_project 9 47313568 47372778 + MGP_WSBEiJ_P0090829 Usp28 protein_coding protein_coding MGP_WSBEiJ_T0090830.1 MGP_WSBEiJ_G0033885.1 mouse_genomes_project 9 47313664 47371810 + MGP_WSBEiJ_P0090830 Usp28 protein_coding unknown_likely_coding MGP_WSBEiJ_T0015553.1 MGP_WSBEiJ_G0013683.1 mouse_genomes_project 9 73826947 73827425 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002390.1 MGP_WSBEiJ_G0002306.1 mouse_genomes_project 9 101581965 101583319 - TEC TEC MGP_WSBEiJ_T0090716.1 MGP_WSBEiJ_G0033848.1 mouse_genomes_project 9 43253206 43285632 - MGP_WSBEiJ_P0090716 Gm10684 protein_coding protein_coding MGP_WSBEiJ_T0093635.1 MGP_WSBEiJ_G0034491.1 mouse_genomes_project 9 115085709 115138419 + MGP_WSBEiJ_P0093635 Ubp1 protein_coding protein_coding MGP_WSBEiJ_T0093636.1 MGP_WSBEiJ_G0034491.1 mouse_genomes_project 9 115085709 115138419 + MGP_WSBEiJ_P0093636 Ubp1 protein_coding protein_coding MGP_WSBEiJ_T0093637.1 MGP_WSBEiJ_G0034491.1 mouse_genomes_project 9 115086930 115138069 + MGP_WSBEiJ_P0093637 Ubp1 protein_coding protein_coding MGP_WSBEiJ_T0093638.1 MGP_WSBEiJ_G0034491.1 mouse_genomes_project 9 115116708 115135544 + MGP_WSBEiJ_P0093638 Ubp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090455.1 MGP_WSBEiJ_G0033740.1 mouse_genomes_project 9 36657216 36658277 - MGP_WSBEiJ_P0090455 Olfr146 protein_coding protein_coding MGP_WSBEiJ_T0093820.1 MGP_WSBEiJ_G0034553.1 mouse_genomes_project 9 123334810 123364994 + MGP_WSBEiJ_P0093820 Vipr1 protein_coding protein_coding MGP_WSBEiJ_T0093821.1 MGP_WSBEiJ_G0034553.1 mouse_genomes_project 9 123335147 123352306 + Vipr1 protein_coding processed_transcript MGP_WSBEiJ_T0093822.1 MGP_WSBEiJ_G0034553.1 mouse_genomes_project 9 123356654 123357947 + Vipr1 protein_coding retained_intron MGP_WSBEiJ_T0093823.1 MGP_WSBEiJ_G0034553.1 mouse_genomes_project 9 123360752 123361549 + Vipr1 protein_coding retained_intron MGP_WSBEiJ_T0005472.1 MGP_WSBEiJ_G0004614.1 mouse_genomes_project 9 112594323 112594937 + Gm43236 antisense antisense MGP_WSBEiJ_T0015584.1 MGP_WSBEiJ_G0013714.1 mouse_genomes_project 9 88060255 88061722 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090448.1 MGP_WSBEiJ_G0033733.1 mouse_genomes_project 9 36462876 36463944 + MGP_WSBEiJ_P0090448 Olfr923 protein_coding protein_coding MGP_WSBEiJ_T0091147.1 MGP_WSBEiJ_G0033990.1 mouse_genomes_project 9 56212418 56227912 - MGP_WSBEiJ_P0091147 Lman1l protein_coding protein_coding MGP_WSBEiJ_T0091148.1 MGP_WSBEiJ_G0033990.1 mouse_genomes_project 9 56212418 56227912 - MGP_WSBEiJ_P0091148 Lman1l protein_coding protein_coding MGP_WSBEiJ_T0002315.1 MGP_WSBEiJ_G0002232.1 mouse_genomes_project 9 54789334 54790903 + TEC TEC MGP_WSBEiJ_T0090786.1 MGP_WSBEiJ_G0033868.1 mouse_genomes_project 9 44442742 44445506 + MGP_WSBEiJ_P0090786 Apoa4 protein_coding protein_coding MGP_WSBEiJ_T0098607.1 MGP_WSBEiJ_G0037270.1 mouse_genomes_project 9 64214980 64215096 - Rnu5g snRNA snRNA MGP_WSBEiJ_T0099837.1 MGP_WSBEiJ_G0038500.1 mouse_genomes_project 9 21394932 21395027 + Gm22380 snoRNA snoRNA MGP_WSBEiJ_T0002304.1 MGP_WSBEiJ_G0002221.1 mouse_genomes_project 9 27262810 27305780 - TEC TEC MGP_WSBEiJ_T0011539.1 MGP_WSBEiJ_G0009696.1 mouse_genomes_project 9 76346986 76347279 - Gm23791 misc_RNA misc_RNA MGP_WSBEiJ_T0098576.1 MGP_WSBEiJ_G0037239.1 mouse_genomes_project 9 96623 96727 + Gm23275 snRNA snRNA MGP_WSBEiJ_T0005384.1 MGP_WSBEiJ_G0004551.1 mouse_genomes_project 9 65667767 65677793 + Gm15563 antisense antisense MGP_WSBEiJ_T0010871.1 MGP_WSBEiJ_G0009028.1 mouse_genomes_project 9 40422745 40422814 + Gm44311 miRNA miRNA MGP_WSBEiJ_T0002419.1 MGP_WSBEiJ_G0002335.1 mouse_genomes_project 9 109680399 109680938 - TEC TEC MGP_WSBEiJ_T0089907.1 MGP_WSBEiJ_G0033521.1 mouse_genomes_project 9 16333079 16334027 - MGP_WSBEiJ_P0089907 Olfr850 protein_coding protein_coding MGP_WSBEiJ_T0089774.1 MGP_WSBEiJ_G0033469.1 mouse_genomes_project 9 10144104 10145480 + MGP_WSBEiJ_P0089774 Phxr4 protein_coding protein_coding MGP_WSBEiJ_T0093213.1 MGP_WSBEiJ_G0034422.1 mouse_genomes_project 9 109318166 109324593 - MGP_WSBEiJ_P0093213 Wdr6 protein_coding protein_coding MGP_WSBEiJ_T0089686.1 MGP_WSBEiJ_G0033439.1 mouse_genomes_project 9 2072210 2087333 + MGP_WSBEiJ_P0089686 Casp4 protein_coding protein_coding MGP_WSBEiJ_T0089687.1 MGP_WSBEiJ_G0033439.1 mouse_genomes_project 9 2072231 2100688 + MGP_WSBEiJ_P0089687 Casp4 protein_coding protein_coding MGP_WSBEiJ_T0089688.1 MGP_WSBEiJ_G0033439.1 mouse_genomes_project 9 2072242 2092940 + Casp4 protein_coding retained_intron MGP_WSBEiJ_T0089689.1 MGP_WSBEiJ_G0033439.1 mouse_genomes_project 9 2072242 2092048 + MGP_WSBEiJ_P0089689 Casp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089690.1 MGP_WSBEiJ_G0033439.1 mouse_genomes_project 9 2072247 2085361 + Casp4 protein_coding retained_intron MGP_WSBEiJ_T0089691.1 MGP_WSBEiJ_G0033439.1 mouse_genomes_project 9 2085019 2099995 + MGP_WSBEiJ_P0089691 Casp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089692.1 MGP_WSBEiJ_G0033439.1 mouse_genomes_project 9 2086967 2090932 + Casp4 protein_coding retained_intron MGP_WSBEiJ_T0005360.1 MGP_WSBEiJ_G0004538.1 mouse_genomes_project 9 48857108 48879792 - Plet1os antisense antisense MGP_WSBEiJ_T0005361.1 MGP_WSBEiJ_G0004538.1 mouse_genomes_project 9 48857112 48876776 - Plet1os antisense antisense MGP_WSBEiJ_T0089897.1 MGP_WSBEiJ_G0033511.1 mouse_genomes_project 9 15815191 15816130 + MGP_WSBEiJ_P0089897 Olfr832 protein_coding protein_coding MGP_WSBEiJ_T0089969.1 MGP_WSBEiJ_G0033543.1 mouse_genomes_project 9 17509881 17524572 + MGP_WSBEiJ_P0089969 Pin1 protein_coding protein_coding MGP_WSBEiJ_T0090468.1 MGP_WSBEiJ_G0033753.1 mouse_genomes_project 9 37258822 37271552 - MGP_WSBEiJ_P0090468 Olfr44 protein_coding protein_coding MGP_WSBEiJ_T0098619.1 MGP_WSBEiJ_G0037282.1 mouse_genomes_project 9 72396117 72396224 + Gm23567 snRNA snRNA MGP_WSBEiJ_T0090953.1 MGP_WSBEiJ_G0033922.1 mouse_genomes_project 9 50541489 50598270 - MGP_WSBEiJ_P0090953 Zc3h12c protein_coding protein_coding MGP_WSBEiJ_T0090954.1 MGP_WSBEiJ_G0033922.1 mouse_genomes_project 9 50544907 50598684 - MGP_WSBEiJ_P0090954 Zc3h12c protein_coding unknown_likely_coding MGP_WSBEiJ_T0098580.1 MGP_WSBEiJ_G0037243.1 mouse_genomes_project 9 12020453 12020608 - Gm22658 snRNA snRNA MGP_WSBEiJ_T0090704.1 MGP_WSBEiJ_G0033842.1 mouse_genomes_project 9 43109357 43120034 - MGP_WSBEiJ_P0090704 Cd3g protein_coding protein_coding MGP_WSBEiJ_T0090705.1 MGP_WSBEiJ_G0033842.1 mouse_genomes_project 9 43109539 43110603 - Cd3g protein_coding retained_intron MGP_WSBEiJ_T0090706.1 MGP_WSBEiJ_G0033842.1 mouse_genomes_project 9 43113407 43120034 - MGP_WSBEiJ_P0090706 Cd3g protein_coding protein_coding MGP_WSBEiJ_T0097119.1 MGP_WSBEiJ_G0035800.1 mouse_genomes_project 9 9575462 9575583 + Gm25365 rRNA rRNA MGP_WSBEiJ_T0091984.1 MGP_WSBEiJ_G0034196.1 mouse_genomes_project 9 80093438 80233113 - MGP_WSBEiJ_P0091984 Impg1 protein_coding protein_coding MGP_WSBEiJ_T0091985.1 MGP_WSBEiJ_G0034196.1 mouse_genomes_project 9 80094450 80233281 - MGP_WSBEiJ_P0091985 Impg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091986.1 MGP_WSBEiJ_G0034196.1 mouse_genomes_project 9 80172031 80233113 - MGP_WSBEiJ_P0091986 Impg1 protein_coding protein_coding MGP_WSBEiJ_T0091794.1 MGP_WSBEiJ_G0034145.1 mouse_genomes_project 9 72898516 73409024 - MGP_WSBEiJ_P0091794 Unc13c protein_coding protein_coding MGP_WSBEiJ_T0091795.1 MGP_WSBEiJ_G0034145.1 mouse_genomes_project 9 72898520 73409104 - MGP_WSBEiJ_P0091795 Unc13c protein_coding unknown_likely_coding MGP_WSBEiJ_T0091796.1 MGP_WSBEiJ_G0034145.1 mouse_genomes_project 9 72899963 73374686 - MGP_WSBEiJ_P0091796 Unc13c protein_coding protein_coding MGP_WSBEiJ_T0005369.1 MGP_WSBEiJ_G0004542.1 mouse_genomes_project 9 52755598 52785199 - Gldnos antisense antisense MGP_WSBEiJ_T0093846.1 MGP_WSBEiJ_G0034557.1 mouse_genomes_project 9 123456548 123468244 + MGP_WSBEiJ_P0093846 Zfp651 protein_coding protein_coding MGP_WSBEiJ_T0099823.1 MGP_WSBEiJ_G0038486.1 mouse_genomes_project 9 1873878 1874013 + Gm24896 snoRNA snoRNA MGP_WSBEiJ_T0091761.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412422 72443096 + MGP_WSBEiJ_P0091761 Ccpg1 protein_coding protein_coding MGP_WSBEiJ_T0091762.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412478 72440122 + MGP_WSBEiJ_P0091762 Ccpg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091763.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412497 72428479 + MGP_WSBEiJ_P0091763 Ccpg1 protein_coding protein_coding MGP_WSBEiJ_T0091764.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412571 72440694 + MGP_WSBEiJ_P0091764 Ccpg1 protein_coding protein_coding MGP_WSBEiJ_T0091765.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412579 72415053 + Ccpg1 protein_coding retained_intron MGP_WSBEiJ_T0091766.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412598 72442756 + MGP_WSBEiJ_P0091766 Ccpg1 protein_coding protein_coding MGP_WSBEiJ_T0091767.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412598 72443094 + MGP_WSBEiJ_P0091767 Ccpg1 protein_coding protein_coding MGP_WSBEiJ_T0091768.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412601 72428751 + Ccpg1 protein_coding retained_intron MGP_WSBEiJ_T0091769.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72412612 72440687 + MGP_WSBEiJ_P0091769 Ccpg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091772.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72436643 72438733 + Ccpg1 protein_coding retained_intron MGP_WSBEiJ_T0091775.1 MGP_WSBEiJ_G0034139.1 mouse_genomes_project 9 72441728 72443096 + Ccpg1 protein_coding retained_intron MGP_WSBEiJ_T0093520.1 MGP_WSBEiJ_G0034471.1 mouse_genomes_project 9 111829672 111846409 + MGP_WSBEiJ_P0093520 Prss46 protein_coding protein_coding MGP_WSBEiJ_T0093521.1 MGP_WSBEiJ_G0034471.1 mouse_genomes_project 9 111839407 111846403 + MGP_WSBEiJ_P0093521 Prss46 protein_coding protein_coding MGP_WSBEiJ_T0089698.1 MGP_WSBEiJ_G0033441.1 mouse_genomes_project 9 2983100 3203944 + MGP_WSBEiJ_P0089698 Pdgfd protein_coding protein_coding MGP_WSBEiJ_T0089699.1 MGP_WSBEiJ_G0033441.1 mouse_genomes_project 9 2983149 3205263 + MGP_WSBEiJ_P0089699 Pdgfd protein_coding protein_coding MGP_WSBEiJ_T0090486.1 MGP_WSBEiJ_G0033765.1 mouse_genomes_project 9 37570023 37570968 - MGP_WSBEiJ_P0090486 protein_coding protein_coding MGP_WSBEiJ_T0005473.1 MGP_WSBEiJ_G0004615.1 mouse_genomes_project 9 116078129 116081552 + Gm9888 antisense antisense MGP_WSBEiJ_T0092540.1 MGP_WSBEiJ_G0034315.1 mouse_genomes_project 9 103906164 103966010 - MGP_WSBEiJ_P0092540 Bfsp2 protein_coding protein_coding MGP_WSBEiJ_T0092541.1 MGP_WSBEiJ_G0034315.1 mouse_genomes_project 9 103906168 103931331 - Bfsp2 protein_coding processed_transcript MGP_WSBEiJ_T0090393.1 MGP_WSBEiJ_G0033689.1 mouse_genomes_project 9 35164756 35175209 - MGP_WSBEiJ_P0090393 Spa17 protein_coding protein_coding MGP_WSBEiJ_T0005461.1 MGP_WSBEiJ_G0004603.1 mouse_genomes_project 9 108453887 108454663 + Gm37850 antisense antisense MGP_WSBEiJ_T0092679.1 MGP_WSBEiJ_G0034340.1 mouse_genomes_project 9 106861094 106876061 - MGP_WSBEiJ_P0092679 Alas1 protein_coding protein_coding MGP_WSBEiJ_T0092680.1 MGP_WSBEiJ_G0034340.1 mouse_genomes_project 9 106861097 106876457 - MGP_WSBEiJ_P0092680 Alas1 protein_coding protein_coding MGP_WSBEiJ_T0092681.1 MGP_WSBEiJ_G0034340.1 mouse_genomes_project 9 106861582 106876187 - MGP_WSBEiJ_P0092681 Alas1 protein_coding protein_coding MGP_WSBEiJ_T0092682.1 MGP_WSBEiJ_G0034340.1 mouse_genomes_project 9 106861597 106871257 - Alas1 protein_coding processed_transcript MGP_WSBEiJ_T0092683.1 MGP_WSBEiJ_G0034340.1 mouse_genomes_project 9 106861850 106866372 - MGP_WSBEiJ_P0092683 Alas1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092684.1 MGP_WSBEiJ_G0034340.1 mouse_genomes_project 9 106863042 106864725 - Alas1 protein_coding retained_intron MGP_WSBEiJ_T0092685.1 MGP_WSBEiJ_G0034340.1 mouse_genomes_project 9 106864318 106867673 - Alas1 protein_coding retained_intron MGP_WSBEiJ_T0092686.1 MGP_WSBEiJ_G0034340.1 mouse_genomes_project 9 106866457 106876183 - MGP_WSBEiJ_P0092686 Alas1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093645.1 MGP_WSBEiJ_G0034493.1 mouse_genomes_project 9 115219717 115268735 + MGP_WSBEiJ_P0093645 Susd5 protein_coding protein_coding MGP_WSBEiJ_T0091215.1 MGP_WSBEiJ_G0034007.1 mouse_genomes_project 9 57037071 57047495 - MGP_WSBEiJ_P0091215 Tbc1d21 protein_coding protein_coding MGP_WSBEiJ_T0011536.1 MGP_WSBEiJ_G0009693.1 mouse_genomes_project 9 42460419 42460696 + Gm22141 misc_RNA misc_RNA MGP_WSBEiJ_T0010896.1 MGP_WSBEiJ_G0009053.1 mouse_genomes_project 9 77174265 77174337 + Gm25250 miRNA miRNA MGP_WSBEiJ_T0015564.1 MGP_WSBEiJ_G0013694.1 mouse_genomes_project 9 76671241 76673441 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092093.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86708335 86827641 - MGP_WSBEiJ_P0092093 Snap91 protein_coding protein_coding MGP_WSBEiJ_T0092094.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86708345 86751870 - Snap91 protein_coding retained_intron MGP_WSBEiJ_T0092095.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86708348 86827651 - MGP_WSBEiJ_P0092095 Snap91 protein_coding protein_coding MGP_WSBEiJ_T0092096.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86708348 86827651 - MGP_WSBEiJ_P0092096 Snap91 protein_coding protein_coding MGP_WSBEiJ_T0092097.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86709090 86827616 - MGP_WSBEiJ_P0092097 Snap91 protein_coding protein_coding MGP_WSBEiJ_T0092098.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86717810 86741813 - Snap91 protein_coding retained_intron MGP_WSBEiJ_T0092099.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86735704 86741987 - Snap91 protein_coding retained_intron MGP_WSBEiJ_T0092100.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86749597 86776283 - Snap91 protein_coding processed_transcript MGP_WSBEiJ_T0092101.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86769297 86827856 - Snap91 protein_coding retained_intron MGP_WSBEiJ_T0092102.1 MGP_WSBEiJ_G0034216.1 mouse_genomes_project 9 86782068 86827599 - MGP_WSBEiJ_P0092102 Snap91 protein_coding protein_coding MGP_WSBEiJ_T0093536.1 MGP_WSBEiJ_G0034476.1 mouse_genomes_project 9 111937557 111945191 - MGP_WSBEiJ_P0093536 protein_coding protein_coding MGP_WSBEiJ_T0015589.1 MGP_WSBEiJ_G0013719.1 mouse_genomes_project 9 90729625 90730222 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090286.1 MGP_WSBEiJ_G0033653.1 mouse_genomes_project 9 32662991 32671080 + MGP_WSBEiJ_P0090286 Rpusd4 protein_coding protein_coding MGP_WSBEiJ_T0090287.1 MGP_WSBEiJ_G0033653.1 mouse_genomes_project 9 32667421 32670325 + Rpusd4 protein_coding retained_intron MGP_WSBEiJ_T0090288.1 MGP_WSBEiJ_G0033653.1 mouse_genomes_project 9 32667777 32668892 + Rpusd4 protein_coding retained_intron MGP_WSBEiJ_T0090289.1 MGP_WSBEiJ_G0033653.1 mouse_genomes_project 9 32670311 32672840 + MGP_WSBEiJ_P0090289 Rpusd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009105.1 MGP_WSBEiJ_G0007326.1 mouse_genomes_project 9 60179095 60180492 - Gm10655 lincRNA lincRNA MGP_WSBEiJ_T0009106.1 MGP_WSBEiJ_G0007326.1 mouse_genomes_project 9 60179176 60179926 - Gm10655 lincRNA lincRNA MGP_WSBEiJ_T0090572.1 MGP_WSBEiJ_G0033806.1 mouse_genomes_project 9 42115742 42120975 + MGP_WSBEiJ_P0090572 Thy1 protein_coding protein_coding MGP_WSBEiJ_T0089847.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12126917 12144927 - MGP_WSBEiJ_P0089847 Cep295 protein_coding protein_coding MGP_WSBEiJ_T0089848.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12126917 12170609 - MGP_WSBEiJ_P0089848 Cep295 protein_coding protein_coding MGP_WSBEiJ_T0089849.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12126919 12145034 - Cep295 protein_coding retained_intron MGP_WSBEiJ_T0089850.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12126922 12152651 - Cep295 protein_coding retained_intron MGP_WSBEiJ_T0089851.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12126922 12170609 - MGP_WSBEiJ_P0089851 Cep295 protein_coding protein_coding MGP_WSBEiJ_T0089852.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12127102 12167538 - MGP_WSBEiJ_P0089852 Cep295 protein_coding protein_coding MGP_WSBEiJ_T0089853.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12127278 12127964 - Cep295 protein_coding retained_intron MGP_WSBEiJ_T0089854.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12133001 12137727 - MGP_WSBEiJ_P0089854 Cep295 protein_coding protein_coding MGP_WSBEiJ_T0089855.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12137089 12143513 - MGP_WSBEiJ_P0089855 Cep295 protein_coding protein_coding MGP_WSBEiJ_T0089856.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12137152 12138618 - Cep295 protein_coding retained_intron MGP_WSBEiJ_T0089857.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12154815 12163723 - Cep295 protein_coding processed_transcript MGP_WSBEiJ_T0089858.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12156001 12164253 - Cep295 protein_coding retained_intron MGP_WSBEiJ_T0089859.1 MGP_WSBEiJ_G0033491.1 mouse_genomes_project 9 12157919 12164634 - Cep295 protein_coding retained_intron MGP_WSBEiJ_T0005438.1 MGP_WSBEiJ_G0004587.1 mouse_genomes_project 9 104043300 104052109 + 4932413F04Rik antisense antisense MGP_WSBEiJ_T0093824.1 MGP_WSBEiJ_G0034554.1 mouse_genomes_project 9 123372090 123398071 - MGP_WSBEiJ_P0093824 Sec22c protein_coding protein_coding MGP_WSBEiJ_T0093825.1 MGP_WSBEiJ_G0034554.1 mouse_genomes_project 9 123375984 123398507 - MGP_WSBEiJ_P0093825 Sec22c protein_coding protein_coding MGP_WSBEiJ_T0093826.1 MGP_WSBEiJ_G0034554.1 mouse_genomes_project 9 123377513 123398021 - MGP_WSBEiJ_P0093826 Sec22c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093827.1 MGP_WSBEiJ_G0034554.1 mouse_genomes_project 9 123381160 123383436 - Sec22c protein_coding retained_intron MGP_WSBEiJ_T0093828.1 MGP_WSBEiJ_G0034554.1 mouse_genomes_project 9 123388579 123398532 - MGP_WSBEiJ_P0093828 Sec22c protein_coding protein_coding MGP_WSBEiJ_T0090465.1 MGP_WSBEiJ_G0033750.1 mouse_genomes_project 9 37142265 37143210 + MGP_WSBEiJ_P0090465 Olfr954 protein_coding protein_coding MGP_WSBEiJ_T0091932.1 MGP_WSBEiJ_G0034186.1 mouse_genomes_project 9 78148042 78176355 + MGP_WSBEiJ_P0091932 Mto1 protein_coding protein_coding MGP_WSBEiJ_T0091933.1 MGP_WSBEiJ_G0034186.1 mouse_genomes_project 9 78148042 78176355 + MGP_WSBEiJ_P0091933 Mto1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091934.1 MGP_WSBEiJ_G0034186.1 mouse_genomes_project 9 78148047 78150307 + Mto1 protein_coding retained_intron MGP_WSBEiJ_T0091935.1 MGP_WSBEiJ_G0034186.1 mouse_genomes_project 9 78164965 78170970 + Mto1 protein_coding retained_intron MGP_WSBEiJ_T0091936.1 MGP_WSBEiJ_G0034186.1 mouse_genomes_project 9 78165258 78177551 + MGP_WSBEiJ_P0091936 Mto1 protein_coding protein_coding MGP_WSBEiJ_T0091937.1 MGP_WSBEiJ_G0034186.1 mouse_genomes_project 9 78170621 78176036 + Mto1 protein_coding retained_intron MGP_WSBEiJ_T0091178.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56709269 56791124 + Stra6 protein_coding retained_intron MGP_WSBEiJ_T0091181.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56724795 56790316 + MGP_WSBEiJ_P0091181 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091182.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56724870 56788529 + MGP_WSBEiJ_P0091182 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091185.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56778183 56803437 + MGP_WSBEiJ_P0091185 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091186.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56778444 56803435 + MGP_WSBEiJ_P0091186 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091187.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56778596 56789965 + MGP_WSBEiJ_P0091187 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091188.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56780978 56789538 + MGP_WSBEiJ_P0091188 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091189.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56783098 56790290 + MGP_WSBEiJ_P0091189 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091190.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56783156 56803478 + MGP_WSBEiJ_P0091190 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091191.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56783156 56790206 + MGP_WSBEiJ_P0091191 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091192.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56783616 56790212 + MGP_WSBEiJ_P0091192 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091193.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56783746 56803478 + MGP_WSBEiJ_P0091193 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091194.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56783746 56790222 + MGP_WSBEiJ_P0091194 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0091195.1 MGP_WSBEiJ_G0034001.1 mouse_genomes_project 9 56783891 56788460 + MGP_WSBEiJ_P0091195 Stra6 protein_coding protein_coding MGP_WSBEiJ_T0017932.1 MGP_WSBEiJ_G0015159.1 mouse_genomes_project 9 62313489 62411098 + Gm16759 processed_transcript lincRNA MGP_WSBEiJ_T0017933.1 MGP_WSBEiJ_G0015159.1 mouse_genomes_project 9 62314262 62487490 + Gm16759 processed_transcript lincRNA MGP_WSBEiJ_T0017934.1 MGP_WSBEiJ_G0015159.1 mouse_genomes_project 9 62314269 62340402 + Gm16759 processed_transcript lincRNA MGP_WSBEiJ_T0017935.1 MGP_WSBEiJ_G0015159.1 mouse_genomes_project 9 62449834 62485815 + Gm16759 processed_transcript processed_transcript MGP_WSBEiJ_T0015567.1 MGP_WSBEiJ_G0013697.1 mouse_genomes_project 9 78084326 78084904 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090408.1 MGP_WSBEiJ_G0033700.1 mouse_genomes_project 9 35614975 35615905 + MGP_WSBEiJ_P0090408 Olfr883 protein_coding protein_coding MGP_WSBEiJ_T0093912.1 MGP_WSBEiJ_G0034583.1 mouse_genomes_project 9 124937333 124975445 - MGP_WSBEiJ_P0093912 Cdcp1 protein_coding protein_coding MGP_WSBEiJ_T0093913.1 MGP_WSBEiJ_G0034583.1 mouse_genomes_project 9 124939566 124944564 - Cdcp1 protein_coding retained_intron MGP_WSBEiJ_T0093914.1 MGP_WSBEiJ_G0034583.1 mouse_genomes_project 9 124947139 124975406 - Cdcp1 protein_coding retained_intron MGP_WSBEiJ_T0090780.1 MGP_WSBEiJ_G0033866.1 mouse_genomes_project 9 44430653 44432545 + MGP_WSBEiJ_P0090780 Apoa1 protein_coding protein_coding MGP_WSBEiJ_T0090781.1 MGP_WSBEiJ_G0033866.1 mouse_genomes_project 9 44430794 44432052 + Apoa1 protein_coding retained_intron MGP_WSBEiJ_T0002348.1 MGP_WSBEiJ_G0002265.1 mouse_genomes_project 9 81824538 81825932 + TEC TEC MGP_WSBEiJ_T0098605.1 MGP_WSBEiJ_G0037268.1 mouse_genomes_project 9 62358450 62358592 + Gm25995 snRNA snRNA MGP_WSBEiJ_T0093860.1 MGP_WSBEiJ_G0034564.1 mouse_genomes_project 9 123648730 123657417 + MGP_WSBEiJ_P0093860 1700048O20Rik protein_coding protein_coding MGP_WSBEiJ_T0091320.1 MGP_WSBEiJ_G0034033.1 mouse_genomes_project 9 60760373 60792785 - MGP_WSBEiJ_P0091320 Kif23 protein_coding protein_coding MGP_WSBEiJ_T0091321.1 MGP_WSBEiJ_G0034033.1 mouse_genomes_project 9 60760753 60792608 - MGP_WSBEiJ_P0091321 Kif23 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090467.1 MGP_WSBEiJ_G0033752.1 mouse_genomes_project 9 37152466 37153522 - MGP_WSBEiJ_P0090467 protein_coding protein_coding MGP_WSBEiJ_T0093767.1 MGP_WSBEiJ_G0034537.1 mouse_genomes_project 9 121555190 121567455 - MGP_WSBEiJ_P0093767 Csrnp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092751.1 MGP_WSBEiJ_G0034353.1 mouse_genomes_project 9 107151751 107153191 + MGP_WSBEiJ_P0092751 Iqcf5 protein_coding protein_coding MGP_WSBEiJ_T0091020.1 MGP_WSBEiJ_G0033949.1 mouse_genomes_project 9 53428484 53461910 + MGP_WSBEiJ_P0091020 Hykk protein_coding protein_coding MGP_WSBEiJ_T0091021.1 MGP_WSBEiJ_G0033949.1 mouse_genomes_project 9 53428512 53442307 + Hykk protein_coding retained_intron MGP_WSBEiJ_T0091022.1 MGP_WSBEiJ_G0033949.1 mouse_genomes_project 9 53428513 53450153 + Hykk protein_coding retained_intron MGP_WSBEiJ_T0091023.1 MGP_WSBEiJ_G0033949.1 mouse_genomes_project 9 53428548 53430445 + Hykk protein_coding processed_transcript MGP_WSBEiJ_T0090625.1 MGP_WSBEiJ_G0033819.1 mouse_genomes_project 9 42419477 42426183 + MGP_WSBEiJ_P0090625 Dpagt1 protein_coding protein_coding MGP_WSBEiJ_T0015595.1 MGP_WSBEiJ_G0013725.1 mouse_genomes_project 9 92611483 92611631 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098585.1 MGP_WSBEiJ_G0037248.1 mouse_genomes_project 9 17329072 17329186 + Gm23316 snRNA snRNA MGP_WSBEiJ_T0010904.1 MGP_WSBEiJ_G0009061.1 mouse_genomes_project 9 106802418 106802506 + Mirlet7g miRNA miRNA MGP_WSBEiJ_T0002417.1 MGP_WSBEiJ_G0002333.1 mouse_genomes_project 9 109290109 109291255 + TEC TEC MGP_WSBEiJ_T0091196.1 MGP_WSBEiJ_G0034002.1 mouse_genomes_project 9 56805762 56808734 - MGP_WSBEiJ_P0091196 Islr protein_coding protein_coding MGP_WSBEiJ_T0091197.1 MGP_WSBEiJ_G0034002.1 mouse_genomes_project 9 56805762 56808064 - MGP_WSBEiJ_P0091197 Islr protein_coding protein_coding MGP_WSBEiJ_T0015621.1 MGP_WSBEiJ_G0013751.1 mouse_genomes_project 9 101844812 101845175 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002323.1 MGP_WSBEiJ_G0002240.1 mouse_genomes_project 9 71349599 71352025 - TEC TEC MGP_WSBEiJ_T0093281.1 MGP_WSBEiJ_G0034432.1 mouse_genomes_project 9 109664772 109680020 + MGP_WSBEiJ_P0093281 Uqcrc1 protein_coding protein_coding MGP_WSBEiJ_T0093282.1 MGP_WSBEiJ_G0034432.1 mouse_genomes_project 9 109664853 109675305 + MGP_WSBEiJ_P0093282 Uqcrc1 protein_coding protein_coding MGP_WSBEiJ_T0093283.1 MGP_WSBEiJ_G0034432.1 mouse_genomes_project 9 109664854 109675121 + MGP_WSBEiJ_P0093283 Uqcrc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093284.1 MGP_WSBEiJ_G0034432.1 mouse_genomes_project 9 109665031 109674840 + Uqcrc1 protein_coding retained_intron MGP_WSBEiJ_T0093285.1 MGP_WSBEiJ_G0034432.1 mouse_genomes_project 9 109672414 109675427 + MGP_WSBEiJ_P0093285 Uqcrc1 protein_coding protein_coding MGP_WSBEiJ_T0093286.1 MGP_WSBEiJ_G0034432.1 mouse_genomes_project 9 109676561 109680016 + Uqcrc1 protein_coding retained_intron MGP_WSBEiJ_T0093287.1 MGP_WSBEiJ_G0034432.1 mouse_genomes_project 9 109677813 109679937 + MGP_WSBEiJ_P0093287 Uqcrc1 protein_coding protein_coding MGP_WSBEiJ_T0093288.1 MGP_WSBEiJ_G0034432.1 mouse_genomes_project 9 109678707 109679509 + Uqcrc1 protein_coding retained_intron MGP_WSBEiJ_T0099834.1 MGP_WSBEiJ_G0038497.1 mouse_genomes_project 9 16296566 16296695 + Gm23048 snoRNA snoRNA MGP_WSBEiJ_T0089862.1 MGP_WSBEiJ_G0033493.1 mouse_genomes_project 9 12379254 12447847 - MGP_WSBEiJ_P0089862 Ccdc67 protein_coding protein_coding MGP_WSBEiJ_T0089863.1 MGP_WSBEiJ_G0033493.1 mouse_genomes_project 9 12379260 12449031 - MGP_WSBEiJ_P0089863 Ccdc67 protein_coding protein_coding MGP_WSBEiJ_T0089864.1 MGP_WSBEiJ_G0033493.1 mouse_genomes_project 9 12379942 12449001 - MGP_WSBEiJ_P0089864 Ccdc67 protein_coding protein_coding MGP_WSBEiJ_T0089865.1 MGP_WSBEiJ_G0033493.1 mouse_genomes_project 9 12393298 12406100 - Ccdc67 protein_coding processed_transcript MGP_WSBEiJ_T0089866.1 MGP_WSBEiJ_G0033493.1 mouse_genomes_project 9 12402202 12449012 - MGP_WSBEiJ_P0089866 Ccdc67 protein_coding protein_coding MGP_WSBEiJ_T0009059.1 MGP_WSBEiJ_G0007286.1 mouse_genomes_project 9 17470157 17474867 - Gm26521 lincRNA lincRNA MGP_WSBEiJ_T0005446.1 MGP_WSBEiJ_G0004593.1 mouse_genomes_project 9 106943343 106970970 - Gm29123 antisense antisense MGP_WSBEiJ_T0091025.1 MGP_WSBEiJ_G0033951.1 mouse_genomes_project 9 53462754 53471286 + MGP_WSBEiJ_P0091025 Psma4 protein_coding protein_coding MGP_WSBEiJ_T0091026.1 MGP_WSBEiJ_G0033951.1 mouse_genomes_project 9 53462762 53468350 + Psma4 protein_coding retained_intron MGP_WSBEiJ_T0091027.1 MGP_WSBEiJ_G0033951.1 mouse_genomes_project 9 53462769 53466997 + Psma4 protein_coding retained_intron MGP_WSBEiJ_T0091028.1 MGP_WSBEiJ_G0033951.1 mouse_genomes_project 9 53462779 53464771 + Psma4 protein_coding processed_transcript MGP_WSBEiJ_T0091029.1 MGP_WSBEiJ_G0033951.1 mouse_genomes_project 9 53462779 53468895 + MGP_WSBEiJ_P0091029 Psma4 protein_coding protein_coding MGP_WSBEiJ_T0091030.1 MGP_WSBEiJ_G0033951.1 mouse_genomes_project 9 53462854 53465391 + Psma4 protein_coding retained_intron MGP_WSBEiJ_T0091031.1 MGP_WSBEiJ_G0033951.1 mouse_genomes_project 9 53463068 53468263 + MGP_WSBEiJ_P0091031 Psma4 protein_coding protein_coding MGP_WSBEiJ_T0091032.1 MGP_WSBEiJ_G0033951.1 mouse_genomes_project 9 53464070 53469750 + MGP_WSBEiJ_P0091032 Psma4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089677.1 MGP_WSBEiJ_G0033432.1 mouse_genomes_project 9 106920 180853 + MGP_WSBEiJ_P0089677 Cwf19l2 protein_coding protein_coding MGP_WSBEiJ_T0092653.1 MGP_WSBEiJ_G0034332.1 mouse_genomes_project 9 106276296 106425185 - MGP_WSBEiJ_P0092653 protein_coding protein_coding MGP_WSBEiJ_T0092654.1 MGP_WSBEiJ_G0034332.1 mouse_genomes_project 9 106277912 106425110 - MGP_WSBEiJ_P0092654 protein_coding protein_coding MGP_WSBEiJ_T0092655.1 MGP_WSBEiJ_G0034332.1 mouse_genomes_project 9 106369776 106405657 - MGP_WSBEiJ_P0092655 protein_coding protein_coding MGP_WSBEiJ_T0090296.1 MGP_WSBEiJ_G0033655.1 mouse_genomes_project 9 32937871 32959762 - MGP_WSBEiJ_P0090296 Ddx25 protein_coding protein_coding MGP_WSBEiJ_T0090992.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52848180 52992457 - MGP_WSBEiJ_P0090992 Dmxl2 protein_coding protein_coding MGP_WSBEiJ_T0090993.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52848186 52865917 - Dmxl2 protein_coding retained_intron MGP_WSBEiJ_T0090994.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52848282 52931124 - MGP_WSBEiJ_P0090994 Dmxl2 protein_coding protein_coding MGP_WSBEiJ_T0090995.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52849133 52992327 - MGP_WSBEiJ_P0090995 Dmxl2 protein_coding protein_coding MGP_WSBEiJ_T0090996.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52901437 52959847 - MGP_WSBEiJ_P0090996 Dmxl2 protein_coding protein_coding MGP_WSBEiJ_T0090997.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52907768 52992402 - Dmxl2 protein_coding retained_intron MGP_WSBEiJ_T0090998.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52931034 52932705 - Dmxl2 protein_coding processed_transcript MGP_WSBEiJ_T0090999.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52958325 52992457 - Dmxl2 protein_coding retained_intron MGP_WSBEiJ_T0091000.1 MGP_WSBEiJ_G0033940.1 mouse_genomes_project 9 52959532 52992591 - MGP_WSBEiJ_P0091000 Dmxl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093741.1 MGP_WSBEiJ_G0034525.1 mouse_genomes_project 9 120892055 120896158 - MGP_WSBEiJ_P0093741 Myd88 protein_coding protein_coding MGP_WSBEiJ_T0093742.1 MGP_WSBEiJ_G0034525.1 mouse_genomes_project 9 120892067 120896119 - Myd88 protein_coding retained_intron MGP_WSBEiJ_T0093744.1 MGP_WSBEiJ_G0034525.1 mouse_genomes_project 9 120895806 120897528 - MGP_WSBEiJ_P0093744 Myd88 protein_coding protein_coding MGP_WSBEiJ_T0090021.1 MGP_WSBEiJ_G0033567.1 mouse_genomes_project 9 18189198 18191943 - MGP_WSBEiJ_P0090021 Cdkn2d protein_coding protein_coding MGP_WSBEiJ_T0090485.1 MGP_WSBEiJ_G0033764.1 mouse_genomes_project 9 37569941 37570968 - MGP_WSBEiJ_P0090485 protein_coding protein_coding MGP_WSBEiJ_T0005467.1 MGP_WSBEiJ_G0004609.1 mouse_genomes_project 9 110216743 110224450 + antisense antisense MGP_WSBEiJ_T0099873.1 MGP_WSBEiJ_G0038536.1 mouse_genomes_project 9 85684926 85685056 - Gm22830 snoRNA snoRNA MGP_WSBEiJ_T0091434.1 MGP_WSBEiJ_G0034061.1 mouse_genomes_project 9 63803044 63914824 + MGP_WSBEiJ_P0091434 Dennd4a protein_coding protein_coding MGP_WSBEiJ_T0002382.1 MGP_WSBEiJ_G0002298.1 mouse_genomes_project 9 100505657 100506800 - TEC TEC MGP_WSBEiJ_T0092656.1 MGP_WSBEiJ_G0034333.1 mouse_genomes_project 9 106460213 106568968 - MGP_WSBEiJ_P0092656 Col6a5 protein_coding protein_coding MGP_WSBEiJ_T0092657.1 MGP_WSBEiJ_G0034333.1 mouse_genomes_project 9 106478681 106484776 - Col6a5 protein_coding retained_intron MGP_WSBEiJ_T0005376.1 MGP_WSBEiJ_G0004546.1 mouse_genomes_project 9 56399582 56456877 + antisense antisense MGP_WSBEiJ_T0005377.1 MGP_WSBEiJ_G0004546.1 mouse_genomes_project 9 56448864 56457205 + antisense antisense MGP_WSBEiJ_T0005378.1 MGP_WSBEiJ_G0004546.1 mouse_genomes_project 9 56450262 56457110 + antisense antisense MGP_WSBEiJ_T0009067.1 MGP_WSBEiJ_G0007294.1 mouse_genomes_project 9 28352096 28353952 - Gm17508 lincRNA lincRNA MGP_WSBEiJ_T0092150.1 MGP_WSBEiJ_G0034231.1 mouse_genomes_project 9 89529241 89567296 - MGP_WSBEiJ_P0092150 AF529169 protein_coding protein_coding MGP_WSBEiJ_T0092151.1 MGP_WSBEiJ_G0034231.1 mouse_genomes_project 9 89533112 89546319 - MGP_WSBEiJ_P0092151 AF529169 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091911.1 MGP_WSBEiJ_G0034175.1 mouse_genomes_project 9 77826210 77844551 + MGP_WSBEiJ_P0091911 Gsta4 protein_coding protein_coding MGP_WSBEiJ_T0090870.1 MGP_WSBEiJ_G0033903.1 mouse_genomes_project 9 49010711 49038673 - MGP_WSBEiJ_P0090870 Dlat protein_coding protein_coding MGP_WSBEiJ_T0090871.1 MGP_WSBEiJ_G0033903.1 mouse_genomes_project 9 49012606 49021540 - Dlat protein_coding retained_intron MGP_WSBEiJ_T0090872.1 MGP_WSBEiJ_G0033903.1 mouse_genomes_project 9 49013534 49024482 - Dlat protein_coding processed_transcript MGP_WSBEiJ_T0090873.1 MGP_WSBEiJ_G0033903.1 mouse_genomes_project 9 49015992 49021241 - Dlat protein_coding retained_intron MGP_WSBEiJ_T0090874.1 MGP_WSBEiJ_G0033903.1 mouse_genomes_project 9 49016309 49025936 - Dlat protein_coding processed_transcript MGP_WSBEiJ_T0090875.1 MGP_WSBEiJ_G0033903.1 mouse_genomes_project 9 49021211 49028203 - Dlat protein_coding retained_intron MGP_WSBEiJ_T0002305.1 MGP_WSBEiJ_G0002222.1 mouse_genomes_project 9 29831024 29834042 - TEC TEC MGP_WSBEiJ_T0005356.1 MGP_WSBEiJ_G0004535.1 mouse_genomes_project 9 43474432 43478217 - 1700003G13Rik antisense antisense MGP_WSBEiJ_T0005357.1 MGP_WSBEiJ_G0004535.1 mouse_genomes_project 9 43474433 43478238 - 1700003G13Rik antisense antisense MGP_WSBEiJ_T0099857.1 MGP_WSBEiJ_G0038520.1 mouse_genomes_project 9 63131884 63131983 + Snord16a snoRNA snoRNA MGP_WSBEiJ_T0091166.1 MGP_WSBEiJ_G0033997.1 mouse_genomes_project 9 56545137 56564270 + MGP_WSBEiJ_P0091166 Ubl7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0017991.1 MGP_WSBEiJ_G0015183.1 mouse_genomes_project 9 124106732 124129350 - A730085K08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0099853.1 MGP_WSBEiJ_G0038516.1 mouse_genomes_project 9 50727154 50727287 + Gm25562 snoRNA snoRNA MGP_WSBEiJ_T0097133.1 MGP_WSBEiJ_G0035814.1 mouse_genomes_project 9 103472438 103472542 - n-R5s89 rRNA rRNA MGP_WSBEiJ_T0091198.1 MGP_WSBEiJ_G0034003.1 mouse_genomes_project 9 56850750 56856750 - MGP_WSBEiJ_P0091198 Islr2 protein_coding protein_coding MGP_WSBEiJ_T0091199.1 MGP_WSBEiJ_G0034003.1 mouse_genomes_project 9 56850750 56858784 - MGP_WSBEiJ_P0091199 Islr2 protein_coding protein_coding MGP_WSBEiJ_T0091200.1 MGP_WSBEiJ_G0034003.1 mouse_genomes_project 9 56850750 56856999 - MGP_WSBEiJ_P0091200 Islr2 protein_coding protein_coding MGP_WSBEiJ_T0091201.1 MGP_WSBEiJ_G0034003.1 mouse_genomes_project 9 56850750 56856264 - MGP_WSBEiJ_P0091201 Islr2 protein_coding protein_coding MGP_WSBEiJ_T0091202.1 MGP_WSBEiJ_G0034003.1 mouse_genomes_project 9 56850750 56856168 - MGP_WSBEiJ_P0091202 Islr2 protein_coding protein_coding MGP_WSBEiJ_T0015588.1 MGP_WSBEiJ_G0013718.1 mouse_genomes_project 9 89993689 89994336 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010876.1 MGP_WSBEiJ_G0009033.1 mouse_genomes_project 9 44130352 44130422 - Mir7087 miRNA miRNA MGP_WSBEiJ_T0010859.1 MGP_WSBEiJ_G0009016.1 mouse_genomes_project 9 17920274 17920352 - Mir1900 miRNA miRNA MGP_WSBEiJ_T0002403.1 MGP_WSBEiJ_G0002319.1 mouse_genomes_project 9 104535157 104537330 - TEC TEC MGP_WSBEiJ_T0092033.1 MGP_WSBEiJ_G0034205.1 mouse_genomes_project 9 83678747 83715116 + Ttk protein_coding retained_intron MGP_WSBEiJ_T0092034.1 MGP_WSBEiJ_G0034205.1 mouse_genomes_project 9 83678748 83718012 + MGP_WSBEiJ_P0092034 Ttk protein_coding protein_coding MGP_WSBEiJ_T0092035.1 MGP_WSBEiJ_G0034205.1 mouse_genomes_project 9 83678776 83718009 + MGP_WSBEiJ_P0092035 Ttk protein_coding protein_coding MGP_WSBEiJ_T0092036.1 MGP_WSBEiJ_G0034205.1 mouse_genomes_project 9 83678792 83681585 + Ttk protein_coding retained_intron MGP_WSBEiJ_T0092037.1 MGP_WSBEiJ_G0034205.1 mouse_genomes_project 9 83678799 83688481 + Ttk protein_coding processed_transcript MGP_WSBEiJ_T0092038.1 MGP_WSBEiJ_G0034205.1 mouse_genomes_project 9 83678824 83687145 + MGP_WSBEiJ_P0092038 Ttk protein_coding protein_coding MGP_WSBEiJ_T0092039.1 MGP_WSBEiJ_G0034205.1 mouse_genomes_project 9 83679847 83717691 + MGP_WSBEiJ_P0092039 Ttk protein_coding unknown_likely_coding MGP_WSBEiJ_T0089727.1 MGP_WSBEiJ_G0033454.1 mouse_genomes_project 9 4614884 4650761 + MGP_WSBEiJ_P0089727 Tmem123 protein_coding protein_coding MGP_WSBEiJ_T0089728.1 MGP_WSBEiJ_G0033454.1 mouse_genomes_project 9 4614992 4647476 + MGP_WSBEiJ_P0089728 Tmem123 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089729.1 MGP_WSBEiJ_G0033454.1 mouse_genomes_project 9 4615008 4650756 + MGP_WSBEiJ_P0089729 Tmem123 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090627.1 MGP_WSBEiJ_G0033821.1 mouse_genomes_project 9 42429763 42438030 - MGP_WSBEiJ_P0090627 Hmbs protein_coding protein_coding MGP_WSBEiJ_T0090628.1 MGP_WSBEiJ_G0033821.1 mouse_genomes_project 9 42429763 42439877 - MGP_WSBEiJ_P0090628 Hmbs protein_coding protein_coding MGP_WSBEiJ_T0093723.1 MGP_WSBEiJ_G0034520.1 mouse_genomes_project 9 120630315 120653157 + Dlec1 protein_coding retained_intron MGP_WSBEiJ_T0093724.1 MGP_WSBEiJ_G0034520.1 mouse_genomes_project 9 120630315 120677913 + MGP_WSBEiJ_P0093724 Dlec1 protein_coding protein_coding MGP_WSBEiJ_T0093725.1 MGP_WSBEiJ_G0034520.1 mouse_genomes_project 9 120630315 120677361 + MGP_WSBEiJ_P0093725 Dlec1 protein_coding protein_coding MGP_WSBEiJ_T0093726.1 MGP_WSBEiJ_G0034520.1 mouse_genomes_project 9 120630346 120662584 + MGP_WSBEiJ_P0093726 Dlec1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093727.1 MGP_WSBEiJ_G0034520.1 mouse_genomes_project 9 120647493 120672172 + Dlec1 protein_coding retained_intron MGP_WSBEiJ_T0093728.1 MGP_WSBEiJ_G0034520.1 mouse_genomes_project 9 120654871 120656090 + Dlec1 protein_coding retained_intron MGP_WSBEiJ_T0093729.1 MGP_WSBEiJ_G0034520.1 mouse_genomes_project 9 120656226 120662582 + Dlec1 protein_coding retained_intron MGP_WSBEiJ_T0093730.1 MGP_WSBEiJ_G0034520.1 mouse_genomes_project 9 120656377 120658097 + Dlec1 protein_coding retained_intron MGP_WSBEiJ_T0093261.1 MGP_WSBEiJ_G0034429.1 mouse_genomes_project 9 109596715 109623332 + MGP_WSBEiJ_P0093261 Celsr3 protein_coding protein_coding MGP_WSBEiJ_T0093262.1 MGP_WSBEiJ_G0034429.1 mouse_genomes_project 9 109597513 109623339 + MGP_WSBEiJ_P0093262 Celsr3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093263.1 MGP_WSBEiJ_G0034429.1 mouse_genomes_project 9 109602135 109603216 + MGP_WSBEiJ_P0093263 Celsr3 protein_coding protein_coding MGP_WSBEiJ_T0093264.1 MGP_WSBEiJ_G0034429.1 mouse_genomes_project 9 109604867 109606969 + Celsr3 protein_coding retained_intron MGP_WSBEiJ_T0093265.1 MGP_WSBEiJ_G0034429.1 mouse_genomes_project 9 109612988 109613605 + Celsr3 protein_coding retained_intron MGP_WSBEiJ_T0093266.1 MGP_WSBEiJ_G0034429.1 mouse_genomes_project 9 109613614 109614300 + Celsr3 protein_coding retained_intron MGP_WSBEiJ_T0093267.1 MGP_WSBEiJ_G0034429.1 mouse_genomes_project 9 109613632 109619114 + MGP_WSBEiJ_P0093267 Celsr3 protein_coding protein_coding MGP_WSBEiJ_T0002412.1 MGP_WSBEiJ_G0002328.1 mouse_genomes_project 9 108516080 108517153 - TEC TEC MGP_WSBEiJ_T0092483.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103157152 103161199 + MGP_WSBEiJ_P0092483 Amotl2 protein_coding protein_coding MGP_WSBEiJ_T0092484.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103157282 103173861 + MGP_WSBEiJ_P0092484 Amotl2 protein_coding protein_coding MGP_WSBEiJ_T0092485.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103157769 103161211 + MGP_WSBEiJ_P0092485 Amotl2 protein_coding protein_coding MGP_WSBEiJ_T0092486.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103158148 103173866 + MGP_WSBEiJ_P0092486 Amotl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092487.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103158160 103173869 + MGP_WSBEiJ_P0092487 Amotl2 protein_coding protein_coding MGP_WSBEiJ_T0092488.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103158909 103160870 + MGP_WSBEiJ_P0092488 Amotl2 protein_coding protein_coding MGP_WSBEiJ_T0092489.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103158950 103160878 + MGP_WSBEiJ_P0092489 Amotl2 protein_coding protein_coding MGP_WSBEiJ_T0092490.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103158965 103160690 + MGP_WSBEiJ_P0092490 Amotl2 protein_coding protein_coding MGP_WSBEiJ_T0092491.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103159048 103168951 + MGP_WSBEiJ_P0092491 Amotl2 protein_coding protein_coding MGP_WSBEiJ_T0092492.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103162759 103168774 + Amotl2 protein_coding processed_transcript MGP_WSBEiJ_T0092493.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103162977 103173866 + Amotl2 protein_coding retained_intron MGP_WSBEiJ_T0092494.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103168778 103172790 + Amotl2 protein_coding processed_transcript MGP_WSBEiJ_T0092495.1 MGP_WSBEiJ_G0034304.1 mouse_genomes_project 9 103171179 103172776 + Amotl2 protein_coding retained_intron MGP_WSBEiJ_T0097477.1 MGP_WSBEiJ_G0036145.1 mouse_genomes_project 9 39528307 39528617 + Gm28119 sense_intronic sense_intronic MGP_WSBEiJ_T0090133.1 MGP_WSBEiJ_G0033611.1 mouse_genomes_project 9 21457155 21541968 - MGP_WSBEiJ_P0090133 Dpy19l1 protein_coding protein_coding MGP_WSBEiJ_T0090134.1 MGP_WSBEiJ_G0033611.1 mouse_genomes_project 9 21457157 21557092 - MGP_WSBEiJ_P0090134 Dpy19l1 protein_coding protein_coding MGP_WSBEiJ_T0090135.1 MGP_WSBEiJ_G0033611.1 mouse_genomes_project 9 21457182 21557092 - MGP_WSBEiJ_P0090135 Dpy19l1 protein_coding protein_coding MGP_WSBEiJ_T0090136.1 MGP_WSBEiJ_G0033611.1 mouse_genomes_project 9 21457430 21472186 - Dpy19l1 protein_coding retained_intron MGP_WSBEiJ_T0090137.1 MGP_WSBEiJ_G0033611.1 mouse_genomes_project 9 21470515 21474644 - Dpy19l1 protein_coding retained_intron MGP_WSBEiJ_T0090138.1 MGP_WSBEiJ_G0033611.1 mouse_genomes_project 9 21536085 21551117 - Dpy19l1 protein_coding processed_transcript MGP_WSBEiJ_T0093542.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112021565 112044095 + MGP_WSBEiJ_P0093542 Ltf protein_coding protein_coding MGP_WSBEiJ_T0093543.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112021586 112044095 + MGP_WSBEiJ_P0093543 Ltf protein_coding protein_coding MGP_WSBEiJ_T0093544.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112021586 112026105 + MGP_WSBEiJ_P0093544 Ltf protein_coding protein_coding MGP_WSBEiJ_T0093545.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112021586 112046369 + MGP_WSBEiJ_P0093545 Ltf protein_coding protein_coding MGP_WSBEiJ_T0093546.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112021604 112028650 + MGP_WSBEiJ_P0093546 Ltf protein_coding protein_coding MGP_WSBEiJ_T0093547.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112026057 112031054 + MGP_WSBEiJ_P0093547 Ltf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093548.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112028027 112029145 + Ltf protein_coding retained_intron MGP_WSBEiJ_T0093549.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112030755 112032127 + Ltf protein_coding retained_intron MGP_WSBEiJ_T0093550.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112030993 112039410 + MGP_WSBEiJ_P0093550 Ltf protein_coding protein_coding MGP_WSBEiJ_T0093551.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112034700 112044079 + MGP_WSBEiJ_P0093551 Ltf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093552.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112039240 112044079 + Ltf protein_coding retained_intron MGP_WSBEiJ_T0093553.1 MGP_WSBEiJ_G0034479.1 mouse_genomes_project 9 112042406 112045928 + MGP_WSBEiJ_P0093553 Ltf protein_coding protein_coding MGP_WSBEiJ_T0093696.1 MGP_WSBEiJ_G0034513.1 mouse_genomes_project 9 119555017 119628129 - MGP_WSBEiJ_P0093696 Cmc1 protein_coding protein_coding MGP_WSBEiJ_T0002402.1 MGP_WSBEiJ_G0002318.1 mouse_genomes_project 9 104084854 104086443 - TEC TEC MGP_WSBEiJ_T0090297.1 MGP_WSBEiJ_G0033656.1 mouse_genomes_project 9 32959828 32968364 + Pus3 protein_coding retained_intron MGP_WSBEiJ_T0090298.1 MGP_WSBEiJ_G0033656.1 mouse_genomes_project 9 32960693 32968627 + MGP_WSBEiJ_P0090298 Pus3 protein_coding protein_coding MGP_WSBEiJ_T0090299.1 MGP_WSBEiJ_G0033656.1 mouse_genomes_project 9 32960699 32968065 + MGP_WSBEiJ_P0090299 Pus3 protein_coding protein_coding MGP_WSBEiJ_T0092255.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96008432 96019909 + Atr protein_coding retained_intron MGP_WSBEiJ_T0092256.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96008432 96106444 + MGP_WSBEiJ_P0092256 Atr protein_coding protein_coding MGP_WSBEiJ_T0092257.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96008474 96056865 + Atr protein_coding retained_intron MGP_WSBEiJ_T0092258.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96008485 96014370 + Atr protein_coding retained_intron MGP_WSBEiJ_T0092259.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96008490 96012591 + Atr protein_coding retained_intron MGP_WSBEiJ_T0092260.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96008504 96021501 + Atr protein_coding retained_intron MGP_WSBEiJ_T0092261.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96008560 96106424 + MGP_WSBEiJ_P0092261 Atr protein_coding unknown_likely_coding MGP_WSBEiJ_T0092262.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96041373 96043701 + Atr protein_coding retained_intron MGP_WSBEiJ_T0092263.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96069569 96073727 + Atr protein_coding retained_intron MGP_WSBEiJ_T0092264.1 MGP_WSBEiJ_G0034255.1 mouse_genomes_project 9 96088574 96090349 + Atr protein_coding retained_intron MGP_WSBEiJ_T0015548.1 MGP_WSBEiJ_G0013678.1 mouse_genomes_project 9 71996767 71997582 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098641.1 MGP_WSBEiJ_G0037304.1 mouse_genomes_project 9 109506532 109506639 - Gm24259 snRNA snRNA MGP_WSBEiJ_T0015638.1 MGP_WSBEiJ_G0013768.1 mouse_genomes_project 9 110845933 110846333 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005409.1 MGP_WSBEiJ_G0004568.1 mouse_genomes_project 9 81544943 81648554 - Gm26907 antisense antisense MGP_WSBEiJ_T0092389.1 MGP_WSBEiJ_G0034284.1 mouse_genomes_project 9 99689675 99744269 - MGP_WSBEiJ_P0092389 Mras protein_coding protein_coding MGP_WSBEiJ_T0092390.1 MGP_WSBEiJ_G0034284.1 mouse_genomes_project 9 99692183 99743769 - MGP_WSBEiJ_P0092390 Mras protein_coding protein_coding MGP_WSBEiJ_T0092391.1 MGP_WSBEiJ_G0034284.1 mouse_genomes_project 9 99692234 99732757 - MGP_WSBEiJ_P0092391 Mras protein_coding protein_coding MGP_WSBEiJ_T0092392.1 MGP_WSBEiJ_G0034284.1 mouse_genomes_project 9 99693988 99698951 - Mras protein_coding retained_intron MGP_WSBEiJ_T0092393.1 MGP_WSBEiJ_G0034284.1 mouse_genomes_project 9 99697095 99706890 - Mras protein_coding retained_intron MGP_WSBEiJ_T0092394.1 MGP_WSBEiJ_G0034284.1 mouse_genomes_project 9 99697256 99727020 - MGP_WSBEiJ_P0092394 Mras protein_coding protein_coding MGP_WSBEiJ_T0090198.1 MGP_WSBEiJ_G0033631.1 mouse_genomes_project 9 27682654 27722533 + MGP_WSBEiJ_P0090198 Snx19 protein_coding protein_coding MGP_WSBEiJ_T0092404.1 MGP_WSBEiJ_G0034287.1 mouse_genomes_project 9 99912802 99922235 + MGP_WSBEiJ_P0092404 A4gnt protein_coding protein_coding MGP_WSBEiJ_T0090817.1 MGP_WSBEiJ_G0033878.1 mouse_genomes_project 9 46773907 46786811 - MGP_WSBEiJ_P0090817 Rexo2 protein_coding protein_coding MGP_WSBEiJ_T0011547.1 MGP_WSBEiJ_G0009704.1 mouse_genomes_project 9 111042015 111042143 - Gm27855 misc_RNA misc_RNA MGP_WSBEiJ_T0011533.1 MGP_WSBEiJ_G0009690.1 mouse_genomes_project 9 17678620 17678941 + Gm26274 misc_RNA misc_RNA MGP_WSBEiJ_T0092556.1 MGP_WSBEiJ_G0034319.1 mouse_genomes_project 9 104538148 104555379 - MGP_WSBEiJ_P0092556 Uba5 protein_coding protein_coding MGP_WSBEiJ_T0092557.1 MGP_WSBEiJ_G0034319.1 mouse_genomes_project 9 104539197 104548337 - MGP_WSBEiJ_P0092557 Uba5 protein_coding protein_coding MGP_WSBEiJ_T0092558.1 MGP_WSBEiJ_G0034319.1 mouse_genomes_project 9 104541131 104555308 - MGP_WSBEiJ_P0092558 Uba5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092559.1 MGP_WSBEiJ_G0034319.1 mouse_genomes_project 9 104548919 104552708 - Uba5 protein_coding retained_intron MGP_WSBEiJ_T0005345.1 MGP_WSBEiJ_G0004525.1 mouse_genomes_project 9 26276581 26286982 + Gm15520 antisense antisense MGP_WSBEiJ_T0092395.1 MGP_WSBEiJ_G0034285.1 mouse_genomes_project 9 99794442 99888978 - MGP_WSBEiJ_P0092395 Armc8 protein_coding protein_coding MGP_WSBEiJ_T0092396.1 MGP_WSBEiJ_G0034285.1 mouse_genomes_project 9 99838083 99888725 - MGP_WSBEiJ_P0092396 Armc8 protein_coding protein_coding MGP_WSBEiJ_T0092397.1 MGP_WSBEiJ_G0034285.1 mouse_genomes_project 9 99870488 99888742 - Armc8 protein_coding retained_intron MGP_WSBEiJ_T0092858.1 MGP_WSBEiJ_G0034373.1 mouse_genomes_project 9 108246934 108249795 + MGP_WSBEiJ_P0092858 Tusc2 protein_coding protein_coding MGP_WSBEiJ_T0092859.1 MGP_WSBEiJ_G0034373.1 mouse_genomes_project 9 108247033 108247631 + Tusc2 protein_coding processed_transcript MGP_WSBEiJ_T0092860.1 MGP_WSBEiJ_G0034373.1 mouse_genomes_project 9 108247052 108248678 + MGP_WSBEiJ_P0092860 Tusc2 protein_coding protein_coding MGP_WSBEiJ_T0093147.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109235783 109246852 + MGP_WSBEiJ_P0093147 Usp19 protein_coding protein_coding MGP_WSBEiJ_T0093148.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109236021 109247490 + MGP_WSBEiJ_P0093148 Usp19 protein_coding protein_coding MGP_WSBEiJ_T0093149.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109236026 109247470 + MGP_WSBEiJ_P0093149 Usp19 protein_coding protein_coding MGP_WSBEiJ_T0093150.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109236026 109247470 + MGP_WSBEiJ_P0093150 Usp19 protein_coding protein_coding MGP_WSBEiJ_T0093151.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109236037 109247470 + MGP_WSBEiJ_P0093151 Usp19 protein_coding protein_coding MGP_WSBEiJ_T0093152.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109237843 109240077 + Usp19 protein_coding retained_intron MGP_WSBEiJ_T0093153.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109238617 109239387 + MGP_WSBEiJ_P0093153 Usp19 protein_coding protein_coding MGP_WSBEiJ_T0093154.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109239494 109240347 + Usp19 protein_coding retained_intron MGP_WSBEiJ_T0093155.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109239523 109240614 + Usp19 protein_coding retained_intron MGP_WSBEiJ_T0093156.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109239784 109246852 + MGP_WSBEiJ_P0093156 Usp19 protein_coding protein_coding MGP_WSBEiJ_T0093157.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109240689 109241616 + Usp19 protein_coding retained_intron MGP_WSBEiJ_T0093158.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109241499 109243710 + Usp19 protein_coding retained_intron MGP_WSBEiJ_T0093159.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109242141 109243872 + Usp19 protein_coding retained_intron MGP_WSBEiJ_T0093160.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109242241 109244350 + MGP_WSBEiJ_P0093160 Usp19 protein_coding protein_coding MGP_WSBEiJ_T0093161.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109243855 109244773 + Usp19 protein_coding retained_intron MGP_WSBEiJ_T0093162.1 MGP_WSBEiJ_G0034416.1 mouse_genomes_project 9 109245302 109246850 + Usp19 protein_coding retained_intron MGP_WSBEiJ_T0005343.1 MGP_WSBEiJ_G0004523.1 mouse_genomes_project 9 21342268 21346389 - Gm15600 antisense antisense MGP_WSBEiJ_T0010863.1 MGP_WSBEiJ_G0009020.1 mouse_genomes_project 9 18765881 18765941 - Mir7083 miRNA miRNA MGP_WSBEiJ_T0092084.1 MGP_WSBEiJ_G0034213.1 mouse_genomes_project 9 86496301 86499044 + MGP_WSBEiJ_P0092084 Rwdd2a protein_coding protein_coding MGP_WSBEiJ_T0092085.1 MGP_WSBEiJ_G0034213.1 mouse_genomes_project 9 86496326 86499210 + MGP_WSBEiJ_P0092085 Rwdd2a protein_coding protein_coding MGP_WSBEiJ_T0092086.1 MGP_WSBEiJ_G0034213.1 mouse_genomes_project 9 86496363 86499151 + MGP_WSBEiJ_P0092086 Rwdd2a protein_coding protein_coding MGP_WSBEiJ_T0090696.1 MGP_WSBEiJ_G0033840.1 mouse_genomes_project 9 43051129 43058619 - MGP_WSBEiJ_P0090696 Atp5l protein_coding protein_coding MGP_WSBEiJ_T0015520.1 MGP_WSBEiJ_G0013650.1 mouse_genomes_project 9 33997203 33997402 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098606.1 MGP_WSBEiJ_G0037269.1 mouse_genomes_project 9 64209845 64209961 - Gm25313 snRNA snRNA MGP_WSBEiJ_T0089735.1 MGP_WSBEiJ_G0033456.1 mouse_genomes_project 9 4699053 4730050 - MGP_WSBEiJ_P0089735 Birc3 protein_coding protein_coding MGP_WSBEiJ_T0089736.1 MGP_WSBEiJ_G0033456.1 mouse_genomes_project 9 4700048 4711919 - MGP_WSBEiJ_P0089736 Birc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089737.1 MGP_WSBEiJ_G0033456.1 mouse_genomes_project 9 4707661 4730009 - MGP_WSBEiJ_P0089737 Birc3 protein_coding protein_coding MGP_WSBEiJ_T0089738.1 MGP_WSBEiJ_G0033456.1 mouse_genomes_project 9 4712383 4730196 - MGP_WSBEiJ_P0089738 Birc3 protein_coding protein_coding MGP_WSBEiJ_T0089739.1 MGP_WSBEiJ_G0033456.1 mouse_genomes_project 9 4712402 4730212 - MGP_WSBEiJ_P0089739 Birc3 protein_coding protein_coding MGP_WSBEiJ_T0089740.1 MGP_WSBEiJ_G0033456.1 mouse_genomes_project 9 4719775 4729883 - Birc3 protein_coding processed_transcript MGP_WSBEiJ_T0089741.1 MGP_WSBEiJ_G0033456.1 mouse_genomes_project 9 4722230 4729923 - Birc3 protein_coding processed_transcript MGP_WSBEiJ_T0090984.1 MGP_WSBEiJ_G0033933.1 mouse_genomes_project 9 52251447 52300896 + MGP_WSBEiJ_P0090984 Slc35f2 protein_coding protein_coding MGP_WSBEiJ_T0009200.1 MGP_WSBEiJ_G0007399.1 mouse_genomes_project 9 120445167 120446067 + Gm16295 lincRNA lincRNA MGP_WSBEiJ_T0093749.1 MGP_WSBEiJ_G0034528.1 mouse_genomes_project 9 120961306 120993495 + MGP_WSBEiJ_P0093749 Acvr2b protein_coding protein_coding MGP_WSBEiJ_T0093750.1 MGP_WSBEiJ_G0034528.1 mouse_genomes_project 9 120961363 120993495 + MGP_WSBEiJ_P0093750 Acvr2b protein_coding protein_coding MGP_WSBEiJ_T0093751.1 MGP_WSBEiJ_G0034528.1 mouse_genomes_project 9 120961408 120998258 + MGP_WSBEiJ_P0093751 Acvr2b protein_coding unknown_likely_coding MGP_WSBEiJ_T0093068.1 MGP_WSBEiJ_G0034400.1 mouse_genomes_project 9 108788964 108793532 + MGP_WSBEiJ_P0093068 Mst1 protein_coding protein_coding MGP_WSBEiJ_T0093069.1 MGP_WSBEiJ_G0034400.1 mouse_genomes_project 9 108788982 108793524 + MGP_WSBEiJ_P0093069 Mst1 protein_coding protein_coding MGP_WSBEiJ_T0093070.1 MGP_WSBEiJ_G0034400.1 mouse_genomes_project 9 108789011 108790843 + MGP_WSBEiJ_P0093070 Mst1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093071.1 MGP_WSBEiJ_G0034400.1 mouse_genomes_project 9 108792833 108793527 + MGP_WSBEiJ_P0093071 Mst1 protein_coding protein_coding MGP_WSBEiJ_T0091387.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63091645 63129555 - MGP_WSBEiJ_P0091387 Zwilch protein_coding protein_coding MGP_WSBEiJ_T0091388.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63092213 63099717 - Zwilch protein_coding retained_intron MGP_WSBEiJ_T0091389.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63092494 63129330 - MGP_WSBEiJ_P0091389 Zwilch protein_coding protein_coding MGP_WSBEiJ_T0091390.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63094968 63129345 - MGP_WSBEiJ_P0091390 Zwilch protein_coding protein_coding MGP_WSBEiJ_T0091391.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63095045 63106729 - MGP_WSBEiJ_P0091391 Zwilch protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091392.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63095047 63102866 - MGP_WSBEiJ_P0091392 Zwilch protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091393.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63099689 63111840 - Zwilch protein_coding retained_intron MGP_WSBEiJ_T0091394.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63102882 63112089 - Zwilch protein_coding retained_intron MGP_WSBEiJ_T0091395.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63111525 63129364 - MGP_WSBEiJ_P0091395 Zwilch protein_coding protein_coding MGP_WSBEiJ_T0091396.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63117436 63129357 - MGP_WSBEiJ_P0091396 Zwilch protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091397.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63117854 63129339 - MGP_WSBEiJ_P0091397 Zwilch protein_coding protein_coding MGP_WSBEiJ_T0091398.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63119316 63129341 - MGP_WSBEiJ_P0091398 Zwilch protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091399.1 MGP_WSBEiJ_G0034052.1 mouse_genomes_project 9 63124745 63129354 - Zwilch protein_coding retained_intron MGP_WSBEiJ_T0009100.1 MGP_WSBEiJ_G0007322.1 mouse_genomes_project 9 57047629 57051315 + 1700072B07Rik lincRNA lincRNA MGP_WSBEiJ_T0015587.1 MGP_WSBEiJ_G0013717.1 mouse_genomes_project 9 89709616 89710079 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099833.1 MGP_WSBEiJ_G0038496.1 mouse_genomes_project 9 12138005 12138081 - Gm24339 snoRNA snoRNA MGP_WSBEiJ_T0090048.1 MGP_WSBEiJ_G0033574.1 mouse_genomes_project 9 18439979 18466237 + MGP_WSBEiJ_P0090048 AB124611 protein_coding protein_coding MGP_WSBEiJ_T0090049.1 MGP_WSBEiJ_G0033574.1 mouse_genomes_project 9 18440004 18466230 + MGP_WSBEiJ_P0090049 AB124611 protein_coding protein_coding MGP_WSBEiJ_T0090050.1 MGP_WSBEiJ_G0033574.1 mouse_genomes_project 9 18440031 18466235 + MGP_WSBEiJ_P0090050 AB124611 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091172.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56673771 56766093 - MGP_WSBEiJ_P0091172 Ccdc33 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091173.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56673778 56749892 - MGP_WSBEiJ_P0091173 Ccdc33 protein_coding protein_coding MGP_WSBEiJ_T0091174.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56673779 56766172 - MGP_WSBEiJ_P0091174 Ccdc33 protein_coding protein_coding MGP_WSBEiJ_T0091175.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56673783 56749820 - MGP_WSBEiJ_P0091175 Ccdc33 protein_coding protein_coding MGP_WSBEiJ_T0091176.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56673820 56676089 - Ccdc33 protein_coding retained_intron MGP_WSBEiJ_T0091177.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56678351 56686655 - Ccdc33 protein_coding processed_transcript MGP_WSBEiJ_T0091179.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56712976 56761706 - Ccdc33 protein_coding processed_transcript MGP_WSBEiJ_T0091180.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56722498 56727555 - Ccdc33 protein_coding retained_intron MGP_WSBEiJ_T0091183.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56732838 56749892 - Ccdc33 protein_coding retained_intron MGP_WSBEiJ_T0091184.1 MGP_WSBEiJ_G0034000.1 mouse_genomes_project 9 56759399 56766156 - MGP_WSBEiJ_P0091184 Ccdc33 protein_coding protein_coding MGP_WSBEiJ_T0015603.1 MGP_WSBEiJ_G0013733.1 mouse_genomes_project 9 95535519 95536249 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091510.1 MGP_WSBEiJ_G0034088.1 mouse_genomes_project 9 65136973 65141529 - MGP_WSBEiJ_P0091510 Snx22 protein_coding protein_coding MGP_WSBEiJ_T0011544.1 MGP_WSBEiJ_G0009701.1 mouse_genomes_project 9 98962049 98962156 - Gm27919 misc_RNA misc_RNA MGP_WSBEiJ_T0010868.1 MGP_WSBEiJ_G0009025.1 mouse_genomes_project 9 39477470 39477550 + Mir100 miRNA miRNA MGP_WSBEiJ_T0005334.1 MGP_WSBEiJ_G0004519.1 mouse_genomes_project 9 11471934 11486367 + Gm10706 antisense antisense MGP_WSBEiJ_T0092998.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678235 108678802 + Uba7 protein_coding processed_transcript MGP_WSBEiJ_T0092999.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678264 108686788 + MGP_WSBEiJ_P0092999 Uba7 protein_coding protein_coding MGP_WSBEiJ_T0093000.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678300 108686788 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093001.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678305 108686788 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093002.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678312 108683230 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093003.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678336 108678881 + Uba7 protein_coding processed_transcript MGP_WSBEiJ_T0093004.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678336 108686788 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093005.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678385 108686790 + MGP_WSBEiJ_P0093005 Uba7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093006.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108678686 108686792 + MGP_WSBEiJ_P0093006 Uba7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093007.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108679038 108679697 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093008.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108679621 108680255 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093009.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108682469 108685516 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093010.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108683620 108685931 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093011.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108685756 108686785 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0093012.1 MGP_WSBEiJ_G0034391.1 mouse_genomes_project 9 108685766 108686683 + Uba7 protein_coding retained_intron MGP_WSBEiJ_T0099875.1 MGP_WSBEiJ_G0038538.1 mouse_genomes_project 9 87815548 87815680 - Gm25528 snoRNA snoRNA MGP_WSBEiJ_T0091817.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74539623 74590828 + Myo5a protein_coding retained_intron MGP_WSBEiJ_T0091818.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74539796 74700224 + MGP_WSBEiJ_P0091818 Myo5a protein_coding protein_coding MGP_WSBEiJ_T0091819.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74539814 74605578 + Myo5a protein_coding retained_intron MGP_WSBEiJ_T0091820.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74539994 74694840 + MGP_WSBEiJ_P0091820 Myo5a protein_coding protein_coding MGP_WSBEiJ_T0091821.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74540173 74652260 + MGP_WSBEiJ_P0091821 Myo5a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091822.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74540208 74695243 + MGP_WSBEiJ_P0091822 Myo5a protein_coding protein_coding MGP_WSBEiJ_T0091823.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74615976 74622612 + Myo5a protein_coding retained_intron MGP_WSBEiJ_T0091824.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74659869 74694774 + Myo5a protein_coding processed_transcript MGP_WSBEiJ_T0091825.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74659932 74670555 + Myo5a protein_coding retained_intron MGP_WSBEiJ_T0091826.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74661581 74672655 + MGP_WSBEiJ_P0091826 Myo5a protein_coding protein_coding MGP_WSBEiJ_T0091827.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74661680 74694283 + MGP_WSBEiJ_P0091827 Myo5a protein_coding protein_coding MGP_WSBEiJ_T0091828.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74661682 74677688 + MGP_WSBEiJ_P0091828 Myo5a protein_coding protein_coding MGP_WSBEiJ_T0091829.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74666394 74669447 + Myo5a protein_coding retained_intron MGP_WSBEiJ_T0091830.1 MGP_WSBEiJ_G0034150.1 mouse_genomes_project 9 74670227 74680121 + Myo5a protein_coding retained_intron MGP_WSBEiJ_T0092279.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96361457 96490775 + MGP_WSBEiJ_P0092279 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092280.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96361463 96490782 + MGP_WSBEiJ_P0092280 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092281.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96361488 96491792 + MGP_WSBEiJ_P0092281 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092282.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96361520 96416748 + Tfdp2 protein_coding processed_transcript MGP_WSBEiJ_T0092283.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96367295 96467120 + MGP_WSBEiJ_P0092283 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092284.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96427531 96483385 + MGP_WSBEiJ_P0092284 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092285.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96427568 96460044 + MGP_WSBEiJ_P0092285 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092286.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96427585 96490778 + MGP_WSBEiJ_P0092286 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092287.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96428637 96491716 + MGP_WSBEiJ_P0092287 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092288.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96460523 96463670 + Tfdp2 protein_coding retained_intron MGP_WSBEiJ_T0092289.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96476960 96480111 + Tfdp2 protein_coding retained_intron MGP_WSBEiJ_T0092290.1 MGP_WSBEiJ_G0034258.1 mouse_genomes_project 9 96483368 96490714 + MGP_WSBEiJ_P0092290 Tfdp2 protein_coding protein_coding MGP_WSBEiJ_T0092057.1 MGP_WSBEiJ_G0034210.1 mouse_genomes_project 9 86227707 86382607 - MGP_WSBEiJ_P0092057 Ube2cbp protein_coding protein_coding MGP_WSBEiJ_T0092058.1 MGP_WSBEiJ_G0034210.1 mouse_genomes_project 9 86228126 86382607 - MGP_WSBEiJ_P0092058 Ube2cbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0015503.1 MGP_WSBEiJ_G0013633.1 mouse_genomes_project 9 11626431 11626779 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090290.1 MGP_WSBEiJ_G0033654.1 mouse_genomes_project 9 32817155 32851165 + MGP_WSBEiJ_P0090290 Cdon protein_coding protein_coding MGP_WSBEiJ_T0090291.1 MGP_WSBEiJ_G0033654.1 mouse_genomes_project 9 32817581 32851140 + MGP_WSBEiJ_P0090291 Cdon protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090292.1 MGP_WSBEiJ_G0033654.1 mouse_genomes_project 9 32817624 32905606 + MGP_WSBEiJ_P0090292 Cdon protein_coding protein_coding MGP_WSBEiJ_T0090293.1 MGP_WSBEiJ_G0033654.1 mouse_genomes_project 9 32819621 32867735 + MGP_WSBEiJ_P0090293 Cdon protein_coding protein_coding MGP_WSBEiJ_T0090294.1 MGP_WSBEiJ_G0033654.1 mouse_genomes_project 9 32847866 32905605 + MGP_WSBEiJ_P0090294 Cdon protein_coding protein_coding MGP_WSBEiJ_T0090295.1 MGP_WSBEiJ_G0033654.1 mouse_genomes_project 9 32853316 32866665 + MGP_WSBEiJ_P0090295 Cdon protein_coding protein_coding MGP_WSBEiJ_T0091299.1 MGP_WSBEiJ_G0034028.1 mouse_genomes_project 9 59504708 59523404 + MGP_WSBEiJ_P0091299 Larp6 protein_coding protein_coding MGP_WSBEiJ_T0091476.1 MGP_WSBEiJ_G0034082.1 mouse_genomes_project 9 64719714 64743705 + protein_coding processed_transcript MGP_WSBEiJ_T0091477.1 MGP_WSBEiJ_G0034082.1 mouse_genomes_project 9 64722076 64742648 + protein_coding processed_transcript MGP_WSBEiJ_T0091478.1 MGP_WSBEiJ_G0034082.1 mouse_genomes_project 9 64730415 64743370 + protein_coding retained_intron MGP_WSBEiJ_T0091479.1 MGP_WSBEiJ_G0034082.1 mouse_genomes_project 9 64730422 64745618 + MGP_WSBEiJ_P0091479 protein_coding protein_coding MGP_WSBEiJ_T0015602.1 MGP_WSBEiJ_G0013732.1 mouse_genomes_project 9 95520550 95521547 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009109.1 MGP_WSBEiJ_G0007329.1 mouse_genomes_project 9 66911248 66912745 - M5C1000I18Rik lincRNA lincRNA MGP_WSBEiJ_T0009110.1 MGP_WSBEiJ_G0007329.1 mouse_genomes_project 9 66911249 66912767 - M5C1000I18Rik lincRNA lincRNA MGP_WSBEiJ_T0009111.1 MGP_WSBEiJ_G0007329.1 mouse_genomes_project 9 66911249 66912745 - M5C1000I18Rik lincRNA lincRNA MGP_WSBEiJ_T0099824.1 MGP_WSBEiJ_G0038487.1 mouse_genomes_project 9 12121607 12121730 + Gm25500 snoRNA snoRNA MGP_WSBEiJ_T0089890.1 MGP_WSBEiJ_G0033504.1 mouse_genomes_project 9 15308349 15319679 + MGP_WSBEiJ_P0089890 Mbd3l1 protein_coding protein_coding MGP_WSBEiJ_T0009064.1 MGP_WSBEiJ_G0007291.1 mouse_genomes_project 9 22225271 22246607 + Gm29642 lincRNA lincRNA MGP_WSBEiJ_T0091145.1 MGP_WSBEiJ_G0033988.1 mouse_genomes_project 9 56194804 56201575 + MGP_WSBEiJ_P0091145 Ulk3 protein_coding protein_coding MGP_WSBEiJ_T0090487.1 MGP_WSBEiJ_G0033766.1 mouse_genomes_project 9 37629414 37630187 + MGP_WSBEiJ_P0090487 protein_coding protein_coding MGP_WSBEiJ_T0089993.1 MGP_WSBEiJ_G0033556.1 mouse_genomes_project 9 17920061 17926834 + MGP_WSBEiJ_P0089993 Icam5 protein_coding protein_coding MGP_WSBEiJ_T0091914.1 MGP_WSBEiJ_G0034178.1 mouse_genomes_project 9 77890172 77896041 + MGP_WSBEiJ_P0091914 protein_coding protein_coding MGP_WSBEiJ_T0010911.1 MGP_WSBEiJ_G0009068.1 mouse_genomes_project 9 109614857 109614943 + Gm23156 miRNA miRNA MGP_WSBEiJ_T0092594.1 MGP_WSBEiJ_G0034325.1 mouse_genomes_project 9 105609378 105635872 + MGP_WSBEiJ_P0092594 Mrpl3 protein_coding protein_coding MGP_WSBEiJ_T0092595.1 MGP_WSBEiJ_G0034325.1 mouse_genomes_project 9 105609378 105632452 + MGP_WSBEiJ_P0092595 Mrpl3 protein_coding protein_coding MGP_WSBEiJ_T0092596.1 MGP_WSBEiJ_G0034325.1 mouse_genomes_project 9 105609409 105618065 + MGP_WSBEiJ_P0092596 Mrpl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092597.1 MGP_WSBEiJ_G0034325.1 mouse_genomes_project 9 105609409 105611741 + MGP_WSBEiJ_P0092597 Mrpl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092598.1 MGP_WSBEiJ_G0034325.1 mouse_genomes_project 9 105609440 105633446 + MGP_WSBEiJ_P0092598 Mrpl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092599.1 MGP_WSBEiJ_G0034325.1 mouse_genomes_project 9 105627121 105630046 + Mrpl3 protein_coding retained_intron MGP_WSBEiJ_T0090489.1 MGP_WSBEiJ_G0033768.1 mouse_genomes_project 9 37665883 37666807 + MGP_WSBEiJ_P0090489 Olfr971 protein_coding protein_coding MGP_WSBEiJ_T0015619.1 MGP_WSBEiJ_G0013749.1 mouse_genomes_project 9 101685147 101685553 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093494.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111622351 111682848 + MGP_WSBEiJ_P0093494 Ccdc12 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093495.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111622962 111624112 + Ccdc12 protein_coding retained_intron MGP_WSBEiJ_T0093496.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111622967 111671012 + Ccdc12 protein_coding retained_intron MGP_WSBEiJ_T0093497.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111622975 111682503 + MGP_WSBEiJ_P0093497 Ccdc12 protein_coding protein_coding MGP_WSBEiJ_T0093498.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111622979 111679985 + Ccdc12 protein_coding retained_intron MGP_WSBEiJ_T0093499.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111623049 111682761 + Ccdc12 protein_coding processed_transcript MGP_WSBEiJ_T0093500.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111633210 111682533 + Ccdc12 protein_coding processed_transcript MGP_WSBEiJ_T0093501.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111681141 111682835 + MGP_WSBEiJ_P0093501 Ccdc12 protein_coding protein_coding MGP_WSBEiJ_T0093502.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111681258 111682841 + Ccdc12 protein_coding retained_intron MGP_WSBEiJ_T0093503.1 MGP_WSBEiJ_G0034464.1 mouse_genomes_project 9 111681291 111682712 + Ccdc12 protein_coding retained_intron MGP_WSBEiJ_T0091511.1 MGP_WSBEiJ_G0034089.1 mouse_genomes_project 9 65160674 65197928 - MGP_WSBEiJ_P0091511 Snx1 protein_coding protein_coding MGP_WSBEiJ_T0091512.1 MGP_WSBEiJ_G0034089.1 mouse_genomes_project 9 65161665 65163889 - Snx1 protein_coding retained_intron MGP_WSBEiJ_T0091513.1 MGP_WSBEiJ_G0034089.1 mouse_genomes_project 9 65166728 65169124 - Snx1 protein_coding retained_intron MGP_WSBEiJ_T0091514.1 MGP_WSBEiJ_G0034089.1 mouse_genomes_project 9 65169091 65174231 - Snx1 protein_coding retained_intron MGP_WSBEiJ_T0091515.1 MGP_WSBEiJ_G0034089.1 mouse_genomes_project 9 65169938 65199629 - MGP_WSBEiJ_P0091515 Snx1 protein_coding protein_coding MGP_WSBEiJ_T0091516.1 MGP_WSBEiJ_G0034089.1 mouse_genomes_project 9 65177007 65178257 - Snx1 protein_coding retained_intron MGP_WSBEiJ_T0091517.1 MGP_WSBEiJ_G0034089.1 mouse_genomes_project 9 65181674 65197839 - Snx1 protein_coding retained_intron MGP_WSBEiJ_T0090423.1 MGP_WSBEiJ_G0033714.1 mouse_genomes_project 9 35994351 35995302 + MGP_WSBEiJ_P0090423 Olfr251 protein_coding protein_coding MGP_WSBEiJ_T0015609.1 MGP_WSBEiJ_G0013739.1 mouse_genomes_project 9 97010575 97010843 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015545.1 MGP_WSBEiJ_G0013675.1 mouse_genomes_project 9 71480776 71481581 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092405.1 MGP_WSBEiJ_G0034288.1 mouse_genomes_project 9 99949393 99957678 + MGP_WSBEiJ_P0092405 Dzip1l protein_coding protein_coding MGP_WSBEiJ_T0092406.1 MGP_WSBEiJ_G0034288.1 mouse_genomes_project 9 99949439 99992773 + MGP_WSBEiJ_P0092406 Dzip1l protein_coding protein_coding MGP_WSBEiJ_T0092407.1 MGP_WSBEiJ_G0034288.1 mouse_genomes_project 9 99949475 99992773 + MGP_WSBEiJ_P0092407 Dzip1l protein_coding protein_coding MGP_WSBEiJ_T0092408.1 MGP_WSBEiJ_G0034288.1 mouse_genomes_project 9 99949740 99992773 + MGP_WSBEiJ_P0092408 Dzip1l protein_coding protein_coding MGP_WSBEiJ_T0092409.1 MGP_WSBEiJ_G0034288.1 mouse_genomes_project 9 99954740 99992682 + MGP_WSBEiJ_P0092409 Dzip1l protein_coding protein_coding MGP_WSBEiJ_T0092410.1 MGP_WSBEiJ_G0034288.1 mouse_genomes_project 9 99966237 99974399 + Dzip1l protein_coding processed_transcript MGP_WSBEiJ_T0092411.1 MGP_WSBEiJ_G0034288.1 mouse_genomes_project 9 99973478 99977165 + Dzip1l protein_coding retained_intron MGP_WSBEiJ_T0015527.1 MGP_WSBEiJ_G0013657.1 mouse_genomes_project 9 42430040 42431986 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090985.1 MGP_WSBEiJ_G0033934.1 mouse_genomes_project 9 52337876 52341470 + MGP_WSBEiJ_P0090985 Sln protein_coding protein_coding MGP_WSBEiJ_T0089893.1 MGP_WSBEiJ_G0033507.1 mouse_genomes_project 9 15689503 15690442 - MGP_WSBEiJ_P0089893 Olfr828 protein_coding protein_coding MGP_WSBEiJ_T0092375.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99543645 99565497 + MGP_WSBEiJ_P0092375 Cep70 protein_coding protein_coding MGP_WSBEiJ_T0092376.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99543720 99598023 + MGP_WSBEiJ_P0092376 Cep70 protein_coding protein_coding MGP_WSBEiJ_T0092377.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99543731 99555077 + Cep70 protein_coding retained_intron MGP_WSBEiJ_T0092378.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99543739 99566663 + MGP_WSBEiJ_P0092378 Cep70 protein_coding protein_coding MGP_WSBEiJ_T0092379.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99543741 99595604 + MGP_WSBEiJ_P0092379 Cep70 protein_coding protein_coding MGP_WSBEiJ_T0092380.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99543760 99564183 + MGP_WSBEiJ_P0092380 Cep70 protein_coding protein_coding MGP_WSBEiJ_T0092381.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99543804 99574896 + MGP_WSBEiJ_P0092381 Cep70 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092382.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99546564 99564801 + Cep70 protein_coding retained_intron MGP_WSBEiJ_T0092383.1 MGP_WSBEiJ_G0034282.1 mouse_genomes_project 9 99589105 99593970 + Cep70 protein_coding retained_intron MGP_WSBEiJ_T0090940.1 MGP_WSBEiJ_G0033918.1 mouse_genomes_project 9 49699703 49739441 - MGP_WSBEiJ_P0090940 1810046K07Rik protein_coding protein_coding MGP_WSBEiJ_T0090941.1 MGP_WSBEiJ_G0033918.1 mouse_genomes_project 9 49700461 49722592 - MGP_WSBEiJ_P0090941 1810046K07Rik protein_coding protein_coding MGP_WSBEiJ_T0005469.1 MGP_WSBEiJ_G0004611.1 mouse_genomes_project 9 110918153 110921021 - Gm43732 antisense antisense MGP_WSBEiJ_T0091402.1 MGP_WSBEiJ_G0034055.1 mouse_genomes_project 9 63142376 63211911 - MGP_WSBEiJ_P0091402 Map2k1 protein_coding protein_coding MGP_WSBEiJ_T0091403.1 MGP_WSBEiJ_G0034055.1 mouse_genomes_project 9 63143135 63144471 - Map2k1 protein_coding retained_intron MGP_WSBEiJ_T0091404.1 MGP_WSBEiJ_G0034055.1 mouse_genomes_project 9 63143343 63144863 - Map2k1 protein_coding retained_intron MGP_WSBEiJ_T0091405.1 MGP_WSBEiJ_G0034055.1 mouse_genomes_project 9 63143895 63152298 - Map2k1 protein_coding processed_transcript MGP_WSBEiJ_T0093878.1 MGP_WSBEiJ_G0034570.1 mouse_genomes_project 9 124486645 124541590 + MGP_WSBEiJ_P0093878 Topaz1 protein_coding protein_coding MGP_WSBEiJ_T0002368.1 MGP_WSBEiJ_G0002284.1 mouse_genomes_project 9 91375087 91375827 - TEC TEC MGP_WSBEiJ_T0015525.1 MGP_WSBEiJ_G0013655.1 mouse_genomes_project 9 38358712 38359252 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005344.1 MGP_WSBEiJ_G0004524.1 mouse_genomes_project 9 21382722 21465201 + Gm10701 antisense antisense MGP_WSBEiJ_T0097124.1 MGP_WSBEiJ_G0035805.1 mouse_genomes_project 9 61391135 61391244 + n-R5s84 rRNA rRNA MGP_WSBEiJ_T0002379.1 MGP_WSBEiJ_G0002295.1 mouse_genomes_project 9 99542129 99543884 - TEC TEC MGP_WSBEiJ_T0098582.1 MGP_WSBEiJ_G0037245.1 mouse_genomes_project 9 17043090 17043243 + Gm25914 snRNA snRNA MGP_WSBEiJ_T0017985.1 MGP_WSBEiJ_G0015180.1 mouse_genomes_project 9 111988509 112008953 + Gm10030 processed_transcript antisense MGP_WSBEiJ_T0017986.1 MGP_WSBEiJ_G0015180.1 mouse_genomes_project 9 112001183 112007449 + Gm10030 processed_transcript retained_intron MGP_WSBEiJ_T0017987.1 MGP_WSBEiJ_G0015180.1 mouse_genomes_project 9 112005705 112007754 + Gm10030 processed_transcript processed_transcript MGP_WSBEiJ_T0099871.1 MGP_WSBEiJ_G0038534.1 mouse_genomes_project 9 82045668 82045799 + Gm23748 snoRNA snoRNA MGP_WSBEiJ_T0090200.1 MGP_WSBEiJ_G0033633.1 mouse_genomes_project 9 28200420 28221407 + MGP_WSBEiJ_P0090200 Adamts8 protein_coding protein_coding MGP_WSBEiJ_T0090201.1 MGP_WSBEiJ_G0033633.1 mouse_genomes_project 9 28201316 28222391 + MGP_WSBEiJ_P0090201 Adamts8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090103.1 MGP_WSBEiJ_G0033598.1 mouse_genomes_project 9 19111461 19116605 - MGP_WSBEiJ_P0090103 Acp5 protein_coding protein_coding MGP_WSBEiJ_T0090104.1 MGP_WSBEiJ_G0033598.1 mouse_genomes_project 9 19111461 19120491 - MGP_WSBEiJ_P0090104 Acp5 protein_coding protein_coding MGP_WSBEiJ_T0090105.1 MGP_WSBEiJ_G0033598.1 mouse_genomes_project 9 19111461 19115350 - MGP_WSBEiJ_P0090105 Acp5 protein_coding protein_coding MGP_WSBEiJ_T0098640.1 MGP_WSBEiJ_G0037303.1 mouse_genomes_project 9 108606722 108606821 + Gm23856 snRNA snRNA MGP_WSBEiJ_T0092822.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108076453 108212098 + MGP_WSBEiJ_P0092822 Cacna2d2 protein_coding protein_coding MGP_WSBEiJ_T0092823.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108076453 108212098 + MGP_WSBEiJ_P0092823 Cacna2d2 protein_coding protein_coding MGP_WSBEiJ_T0092824.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108076721 108211746 + MGP_WSBEiJ_P0092824 Cacna2d2 protein_coding protein_coding MGP_WSBEiJ_T0092825.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108076721 108212098 + MGP_WSBEiJ_P0092825 Cacna2d2 protein_coding protein_coding MGP_WSBEiJ_T0092826.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108076878 108212098 + MGP_WSBEiJ_P0092826 Cacna2d2 protein_coding protein_coding MGP_WSBEiJ_T0092827.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108076923 108210243 + MGP_WSBEiJ_P0092827 Cacna2d2 protein_coding protein_coding MGP_WSBEiJ_T0092828.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108186438 108194350 + Cacna2d2 protein_coding processed_transcript MGP_WSBEiJ_T0092829.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108190098 108194712 + Cacna2d2 protein_coding processed_transcript MGP_WSBEiJ_T0092830.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108204289 108206263 + Cacna2d2 protein_coding retained_intron MGP_WSBEiJ_T0092831.1 MGP_WSBEiJ_G0034367.1 mouse_genomes_project 9 108209435 108210346 + Cacna2d2 protein_coding retained_intron MGP_WSBEiJ_T0015645.1 MGP_WSBEiJ_G0013775.1 mouse_genomes_project 9 122898442 122898792 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009068.1 MGP_WSBEiJ_G0007295.1 mouse_genomes_project 9 30195662 30196553 + lincRNA lincRNA MGP_WSBEiJ_T0009097.1 MGP_WSBEiJ_G0007319.1 mouse_genomes_project 9 55746167 55756894 + 1700041C23Rik lincRNA lincRNA MGP_WSBEiJ_T0091011.1 MGP_WSBEiJ_G0033945.1 mouse_genomes_project 9 53199998 53215892 + MGP_WSBEiJ_P0091011 Dnaja4 protein_coding protein_coding MGP_WSBEiJ_T0091012.1 MGP_WSBEiJ_G0033945.1 mouse_genomes_project 9 53200639 53210458 + MGP_WSBEiJ_P0091012 Dnaja4 protein_coding protein_coding MGP_WSBEiJ_T0091013.1 MGP_WSBEiJ_G0033945.1 mouse_genomes_project 9 53200684 53217446 + MGP_WSBEiJ_P0091013 Dnaja4 protein_coding protein_coding MGP_WSBEiJ_T0092369.1 MGP_WSBEiJ_G0034279.1 mouse_genomes_project 9 99287064 99322041 - MGP_WSBEiJ_P0092369 Gm1123 protein_coding protein_coding MGP_WSBEiJ_T0091483.1 MGP_WSBEiJ_G0034084.1 mouse_genomes_project 9 64888681 64949181 - MGP_WSBEiJ_P0091483 Trip4 protein_coding protein_coding MGP_WSBEiJ_T0091484.1 MGP_WSBEiJ_G0034084.1 mouse_genomes_project 9 64898575 64914175 - Trip4 protein_coding retained_intron MGP_WSBEiJ_T0091485.1 MGP_WSBEiJ_G0034084.1 mouse_genomes_project 9 64945159 64974478 - MGP_WSBEiJ_P0091485 Trip4 protein_coding protein_coding MGP_WSBEiJ_T0091489.1 MGP_WSBEiJ_G0034084.1 mouse_genomes_project 9 64959192 64974411 - Trip4 protein_coding processed_transcript MGP_WSBEiJ_T0091490.1 MGP_WSBEiJ_G0034084.1 mouse_genomes_project 9 64959530 64974478 - Trip4 protein_coding processed_transcript MGP_WSBEiJ_T0091491.1 MGP_WSBEiJ_G0034084.1 mouse_genomes_project 9 64959996 64974486 - Trip4 protein_coding processed_transcript MGP_WSBEiJ_T0091492.1 MGP_WSBEiJ_G0034084.1 mouse_genomes_project 9 64962898 64974478 - Trip4 protein_coding retained_intron MGP_WSBEiJ_T0090927.1 MGP_WSBEiJ_G0033912.1 mouse_genomes_project 9 49280294 49402002 - MGP_WSBEiJ_P0090927 Sik2 protein_coding protein_coding MGP_WSBEiJ_T0090928.1 MGP_WSBEiJ_G0033912.1 mouse_genomes_project 9 49280294 49401902 - MGP_WSBEiJ_P0090928 Sik2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090929.1 MGP_WSBEiJ_G0033912.1 mouse_genomes_project 9 49280294 49401865 - MGP_WSBEiJ_P0090929 Sik2 protein_coding protein_coding MGP_WSBEiJ_T0090930.1 MGP_WSBEiJ_G0033912.1 mouse_genomes_project 9 49280294 49401865 - MGP_WSBEiJ_P0090930 Sik2 protein_coding protein_coding MGP_WSBEiJ_T0090931.1 MGP_WSBEiJ_G0033912.1 mouse_genomes_project 9 49318222 49401955 - Sik2 protein_coding processed_transcript MGP_WSBEiJ_T0090932.1 MGP_WSBEiJ_G0033912.1 mouse_genomes_project 9 49320520 49401913 - Sik2 protein_coding processed_transcript MGP_WSBEiJ_T0090933.1 MGP_WSBEiJ_G0033912.1 mouse_genomes_project 9 49323794 49401929 - Sik2 protein_coding retained_intron MGP_WSBEiJ_T0090934.1 MGP_WSBEiJ_G0033912.1 mouse_genomes_project 9 49388519 49401940 - Sik2 protein_coding retained_intron MGP_WSBEiJ_T0093892.1 MGP_WSBEiJ_G0034578.1 mouse_genomes_project 9 124776400 124778548 + MGP_WSBEiJ_P0093892 Tmem42 protein_coding protein_coding MGP_WSBEiJ_T0009133.1 MGP_WSBEiJ_G0007349.1 mouse_genomes_project 9 82059348 82063038 + 1700063H06Rik lincRNA lincRNA MGP_WSBEiJ_T0002312.1 MGP_WSBEiJ_G0002229.1 mouse_genomes_project 9 31929696 31953677 + TEC TEC MGP_WSBEiJ_T0090799.1 MGP_WSBEiJ_G0033872.1 mouse_genomes_project 9 44508582 44524971 - MGP_WSBEiJ_P0090799 4931429L15Rik protein_coding protein_coding MGP_WSBEiJ_T0090800.1 MGP_WSBEiJ_G0033872.1 mouse_genomes_project 9 44509240 44516609 - MGP_WSBEiJ_P0090800 4931429L15Rik protein_coding protein_coding MGP_WSBEiJ_T0090801.1 MGP_WSBEiJ_G0033872.1 mouse_genomes_project 9 44515320 44520966 - MGP_WSBEiJ_P0090801 4931429L15Rik protein_coding protein_coding MGP_WSBEiJ_T0091802.1 MGP_WSBEiJ_G0034147.1 mouse_genomes_project 9 74315686 74345765 + MGP_WSBEiJ_P0091802 Onecut1 protein_coding protein_coding MGP_WSBEiJ_T0091803.1 MGP_WSBEiJ_G0034147.1 mouse_genomes_project 9 74320236 74344344 + Onecut1 protein_coding processed_transcript MGP_WSBEiJ_T0093522.1 MGP_WSBEiJ_G0034472.1 mouse_genomes_project 9 111847848 111855590 + MGP_WSBEiJ_P0093522 Prss50 protein_coding protein_coding MGP_WSBEiJ_T0093523.1 MGP_WSBEiJ_G0034472.1 mouse_genomes_project 9 111852326 111855589 + MGP_WSBEiJ_P0093523 Prss50 protein_coding protein_coding MGP_WSBEiJ_T0090204.1 MGP_WSBEiJ_G0033635.1 mouse_genomes_project 9 28360863 28404501 - MGP_WSBEiJ_P0090204 St14 protein_coding protein_coding MGP_WSBEiJ_T0090205.1 MGP_WSBEiJ_G0033635.1 mouse_genomes_project 9 28371747 28404671 - St14 protein_coding retained_intron MGP_WSBEiJ_T0090206.1 MGP_WSBEiJ_G0033635.1 mouse_genomes_project 9 28372391 28375304 - St14 protein_coding retained_intron MGP_WSBEiJ_T0090207.1 MGP_WSBEiJ_G0033635.1 mouse_genomes_project 9 28378335 28404671 - MGP_WSBEiJ_P0090207 St14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090224.1 MGP_WSBEiJ_G0033639.1 mouse_genomes_project 9 28722008 28762141 - MGP_WSBEiJ_P0090224 Tmem45b protein_coding protein_coding MGP_WSBEiJ_T0100157.1 MGP_WSBEiJ_G0038736.1 mouse_genomes_project 9 38358677 38359325 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100158.1 MGP_WSBEiJ_G0038736.1 mouse_genomes_project 9 38358712 38359295 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0093119.1 MGP_WSBEiJ_G0034411.1 mouse_genomes_project 9 109139035 109166364 - MGP_WSBEiJ_P0093119 Ccdc36 protein_coding protein_coding MGP_WSBEiJ_T0009057.1 MGP_WSBEiJ_G0007284.1 mouse_genomes_project 9 11627378 11629523 + Gm16302 lincRNA lincRNA MGP_WSBEiJ_T0002332.1 MGP_WSBEiJ_G0002249.1 mouse_genomes_project 9 72086640 72088130 + TEC TEC MGP_WSBEiJ_T0010851.1 MGP_WSBEiJ_G0009008.1 mouse_genomes_project 9 6505433 6505526 - Gm26195 miRNA miRNA MGP_WSBEiJ_T0005340.1 MGP_WSBEiJ_G0004522.1 mouse_genomes_project 9 19177449 19199013 - 1810064F22Rik antisense antisense MGP_WSBEiJ_T0005341.1 MGP_WSBEiJ_G0004522.1 mouse_genomes_project 9 19191966 19199034 - 1810064F22Rik antisense antisense MGP_WSBEiJ_T0005342.1 MGP_WSBEiJ_G0004522.1 mouse_genomes_project 9 19192527 19193746 - 1810064F22Rik antisense antisense MGP_WSBEiJ_T0015625.1 MGP_WSBEiJ_G0013755.1 mouse_genomes_project 9 102990423 102990624 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092274.1 MGP_WSBEiJ_G0034257.1 mouse_genomes_project 9 96277194 96343005 + MGP_WSBEiJ_P0092274 Gk5 protein_coding protein_coding MGP_WSBEiJ_T0092275.1 MGP_WSBEiJ_G0034257.1 mouse_genomes_project 9 96277207 96347423 + MGP_WSBEiJ_P0092275 Gk5 protein_coding protein_coding MGP_WSBEiJ_T0092276.1 MGP_WSBEiJ_G0034257.1 mouse_genomes_project 9 96277264 96345625 + MGP_WSBEiJ_P0092276 Gk5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092277.1 MGP_WSBEiJ_G0034257.1 mouse_genomes_project 9 96282093 96295399 + Gk5 protein_coding processed_transcript MGP_WSBEiJ_T0092278.1 MGP_WSBEiJ_G0034257.1 mouse_genomes_project 9 96333721 96336270 + Gk5 protein_coding retained_intron MGP_WSBEiJ_T0089872.1 MGP_WSBEiJ_G0033498.1 mouse_genomes_project 9 15111948 15134592 + MGP_WSBEiJ_P0089872 Chordc1 protein_coding protein_coding MGP_WSBEiJ_T0015622.1 MGP_WSBEiJ_G0013752.1 mouse_genomes_project 9 101857589 101858428 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091216.1 MGP_WSBEiJ_G0034008.1 mouse_genomes_project 9 57171597 57183547 + MGP_WSBEiJ_P0091216 6030419C18Rik protein_coding protein_coding MGP_WSBEiJ_T0090524.1 MGP_WSBEiJ_G0033785.1 mouse_genomes_project 9 38358683 38359338 + MGP_WSBEiJ_P0090524 protein_coding protein_coding MGP_WSBEiJ_T0090419.1 MGP_WSBEiJ_G0033710.1 mouse_genomes_project 9 35876694 35877645 + MGP_WSBEiJ_P0090419 Olfr895 protein_coding protein_coding MGP_WSBEiJ_T0015529.1 MGP_WSBEiJ_G0013659.1 mouse_genomes_project 9 44025110 44026159 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092497.1 MGP_WSBEiJ_G0034306.1 mouse_genomes_project 9 103287429 103364091 + MGP_WSBEiJ_P0092497 Ryk protein_coding protein_coding MGP_WSBEiJ_T0092498.1 MGP_WSBEiJ_G0034306.1 mouse_genomes_project 9 103287484 103364502 + MGP_WSBEiJ_P0092498 Ryk protein_coding protein_coding MGP_WSBEiJ_T0092499.1 MGP_WSBEiJ_G0034306.1 mouse_genomes_project 9 103287494 103364854 + MGP_WSBEiJ_P0092499 Ryk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092500.1 MGP_WSBEiJ_G0034306.1 mouse_genomes_project 9 103299436 103316188 + Ryk protein_coding processed_transcript MGP_WSBEiJ_T0092501.1 MGP_WSBEiJ_G0034306.1 mouse_genomes_project 9 103324260 103336852 + Ryk protein_coding retained_intron MGP_WSBEiJ_T0092502.1 MGP_WSBEiJ_G0034306.1 mouse_genomes_project 9 103354960 103355954 + Ryk protein_coding retained_intron MGP_WSBEiJ_T0100167.1 MGP_WSBEiJ_G0038741.1 mouse_genomes_project 9 110736182 110742017 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0091643.1 MGP_WSBEiJ_G0034119.1 mouse_genomes_project 9 69958775 69960399 + MGP_WSBEiJ_P0091643 Gm10642 protein_coding protein_coding MGP_WSBEiJ_T0015568.1 MGP_WSBEiJ_G0013698.1 mouse_genomes_project 9 79843939 79844267 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090412.1 MGP_WSBEiJ_G0033703.1 mouse_genomes_project 9 35677661 35678591 + MGP_WSBEiJ_P0090412 Olfr887 protein_coding protein_coding MGP_WSBEiJ_T0098618.1 MGP_WSBEiJ_G0037281.1 mouse_genomes_project 9 72029510 72029616 + Gm23057 snRNA snRNA MGP_WSBEiJ_T0093438.1 MGP_WSBEiJ_G0034455.1 mouse_genomes_project 9 111258948 111276684 + MGP_WSBEiJ_P0093438 Elp6 protein_coding protein_coding MGP_WSBEiJ_T0093439.1 MGP_WSBEiJ_G0034455.1 mouse_genomes_project 9 111258979 111277463 + MGP_WSBEiJ_P0093439 Elp6 protein_coding protein_coding MGP_WSBEiJ_T0093440.1 MGP_WSBEiJ_G0034455.1 mouse_genomes_project 9 111259015 111274933 + MGP_WSBEiJ_P0093440 Elp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093441.1 MGP_WSBEiJ_G0034455.1 mouse_genomes_project 9 111259271 111270215 + MGP_WSBEiJ_P0093441 Elp6 protein_coding protein_coding MGP_WSBEiJ_T0093442.1 MGP_WSBEiJ_G0034455.1 mouse_genomes_project 9 111264051 111268435 + Elp6 protein_coding retained_intron MGP_WSBEiJ_T0090139.1 MGP_WSBEiJ_G0033612.1 mouse_genomes_project 9 21601447 21740741 - MGP_WSBEiJ_P0090139 Dpy19l2 protein_coding protein_coding MGP_WSBEiJ_T0091642.1 MGP_WSBEiJ_G0034118.1 mouse_genomes_project 9 69896826 69959699 - MGP_WSBEiJ_P0091642 Fam63b protein_coding protein_coding MGP_WSBEiJ_T0090653.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807506 42851370 - MGP_WSBEiJ_P0090653 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090654.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807510 42838894 - MGP_WSBEiJ_P0090654 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090655.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807510 42851349 - MGP_WSBEiJ_P0090655 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090656.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807510 42836519 - MGP_WSBEiJ_P0090656 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090657.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807510 42859125 - MGP_WSBEiJ_P0090657 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090658.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807510 42836544 - MGP_WSBEiJ_P0090658 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090659.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807512 42824992 - MGP_WSBEiJ_P0090659 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090660.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807512 42851370 - MGP_WSBEiJ_P0090660 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090661.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42807512 42839651 - MGP_WSBEiJ_P0090661 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090662.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42808837 42821105 - Phldb1 protein_coding retained_intron MGP_WSBEiJ_T0090663.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42815672 42819680 - Phldb1 protein_coding retained_intron MGP_WSBEiJ_T0090664.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42820993 42827367 - MGP_WSBEiJ_P0090664 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090665.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42824220 42834228 - MGP_WSBEiJ_P0090665 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090666.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42826831 42831689 - MGP_WSBEiJ_P0090666 Phldb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090667.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42839394 42844707 - MGP_WSBEiJ_P0090667 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090668.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42839564 42844670 - MGP_WSBEiJ_P0090668 Phldb1 protein_coding protein_coding MGP_WSBEiJ_T0090669.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42841602 42850620 - Phldb1 protein_coding retained_intron MGP_WSBEiJ_T0090670.1 MGP_WSBEiJ_G0033834.1 mouse_genomes_project 9 42849279 42849756 - Phldb1 protein_coding processed_transcript MGP_WSBEiJ_T0010884.1 MGP_WSBEiJ_G0009041.1 mouse_genomes_project 9 56875645 56875750 + Mir6385 miRNA miRNA MGP_WSBEiJ_T0002337.1 MGP_WSBEiJ_G0002254.1 mouse_genomes_project 9 72310992 72313887 + TEC TEC MGP_WSBEiJ_T0098644.1 MGP_WSBEiJ_G0037307.1 mouse_genomes_project 9 116147329 116147433 + Gm23889 snRNA snRNA MGP_WSBEiJ_T0090820.1 MGP_WSBEiJ_G0033881.1 mouse_genomes_project 9 46897193 46902693 - Nnmt protein_coding processed_transcript MGP_WSBEiJ_T0090821.1 MGP_WSBEiJ_G0033881.1 mouse_genomes_project 9 46897193 46910234 - MGP_WSBEiJ_P0090821 Nnmt protein_coding protein_coding MGP_WSBEiJ_T0090822.1 MGP_WSBEiJ_G0033881.1 mouse_genomes_project 9 46897193 46910234 - MGP_WSBEiJ_P0090822 Nnmt protein_coding protein_coding MGP_WSBEiJ_T0090823.1 MGP_WSBEiJ_G0033881.1 mouse_genomes_project 9 46897207 46902767 - Nnmt protein_coding processed_transcript MGP_WSBEiJ_T0090824.1 MGP_WSBEiJ_G0033881.1 mouse_genomes_project 9 46908388 46910158 - Nnmt protein_coding retained_intron MGP_WSBEiJ_T0093925.1 MGP_WSBEiJ_G0034589.1 mouse_genomes_project 9 125411385 125457708 - MGP_WSBEiJ_P0093925 protein_coding protein_coding MGP_WSBEiJ_T0093926.1 MGP_WSBEiJ_G0034589.1 mouse_genomes_project 9 125412259 125457629 - MGP_WSBEiJ_P0093926 protein_coding protein_coding MGP_WSBEiJ_T0093927.1 MGP_WSBEiJ_G0034589.1 mouse_genomes_project 9 125433185 125457605 - MGP_WSBEiJ_P0093927 protein_coding protein_coding MGP_WSBEiJ_T0099852.1 MGP_WSBEiJ_G0038515.1 mouse_genomes_project 9 44791212 44791342 + Gm22659 snoRNA snoRNA MGP_WSBEiJ_T0090719.1 MGP_WSBEiJ_G0033850.1 mouse_genomes_project 9 43288462 43304184 + MGP_WSBEiJ_P0090719 Scn4b protein_coding protein_coding MGP_WSBEiJ_T0089991.1 MGP_WSBEiJ_G0033554.1 mouse_genomes_project 9 17904012 17916819 + MGP_WSBEiJ_P0089991 Icam1 protein_coding protein_coding MGP_WSBEiJ_T0009168.1 MGP_WSBEiJ_G0007375.1 mouse_genomes_project 9 101743309 101749084 + Gm28979 lincRNA lincRNA MGP_WSBEiJ_T0093762.1 MGP_WSBEiJ_G0034535.1 mouse_genomes_project 9 121506143 121519412 - MGP_WSBEiJ_P0093762 Gorasp1 protein_coding protein_coding MGP_WSBEiJ_T0090499.1 MGP_WSBEiJ_G0033778.1 mouse_genomes_project 9 37952724 37953669 - MGP_WSBEiJ_P0090499 Olfr984 protein_coding protein_coding MGP_WSBEiJ_T0093289.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109683978 109715272 + MGP_WSBEiJ_P0093289 Col7a1 protein_coding protein_coding MGP_WSBEiJ_T0093290.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109684137 109715272 + MGP_WSBEiJ_P0093290 Col7a1 protein_coding protein_coding MGP_WSBEiJ_T0093291.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109684137 109715276 + MGP_WSBEiJ_P0093291 Col7a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093292.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109684879 109685807 + Col7a1 protein_coding retained_intron MGP_WSBEiJ_T0093293.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109698036 109698715 + Col7a1 protein_coding retained_intron MGP_WSBEiJ_T0093294.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109700069 109710622 + Col7a1 protein_coding retained_intron MGP_WSBEiJ_T0093295.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109705738 109707592 + Col7a1 protein_coding retained_intron MGP_WSBEiJ_T0093296.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109713051 109714901 + Col7a1 protein_coding retained_intron MGP_WSBEiJ_T0093297.1 MGP_WSBEiJ_G0034433.1 mouse_genomes_project 9 109713284 109714314 + Col7a1 protein_coding retained_intron MGP_WSBEiJ_T0009058.1 MGP_WSBEiJ_G0007285.1 mouse_genomes_project 9 17282644 17422002 + lincRNA lincRNA MGP_WSBEiJ_T0092103.1 MGP_WSBEiJ_G0034217.1 mouse_genomes_project 9 86968518 86972903 + MGP_WSBEiJ_P0092103 Ripply2 protein_coding protein_coding MGP_WSBEiJ_T0092104.1 MGP_WSBEiJ_G0034217.1 mouse_genomes_project 9 86968617 86972902 + MGP_WSBEiJ_P0092104 Ripply2 protein_coding protein_coding MGP_WSBEiJ_T0090111.1 MGP_WSBEiJ_G0033602.1 mouse_genomes_project 9 19234493 19248118 - MGP_WSBEiJ_P0090111 Zfp599 protein_coding protein_coding MGP_WSBEiJ_T0091758.1 MGP_WSBEiJ_G0034137.1 mouse_genomes_project 9 72385435 72443075 + MGP_WSBEiJ_P0091758 Gm44503 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091401.1 MGP_WSBEiJ_G0034054.1 mouse_genomes_project 9 63135898 63139268 + MGP_WSBEiJ_P0091401 Snapc5 protein_coding protein_coding MGP_WSBEiJ_T0089710.1 MGP_WSBEiJ_G0033445.1 mouse_genomes_project 9 4095516 4106340 + MGP_WSBEiJ_P0089710 Mmp13 protein_coding protein_coding MGP_WSBEiJ_T0005442.1 MGP_WSBEiJ_G0004591.1 mouse_genomes_project 9 106772154 106782964 + D030055H07Rik antisense antisense MGP_WSBEiJ_T0005443.1 MGP_WSBEiJ_G0004591.1 mouse_genomes_project 9 106778204 106783010 + D030055H07Rik antisense antisense MGP_WSBEiJ_T0005444.1 MGP_WSBEiJ_G0004591.1 mouse_genomes_project 9 106779592 106783460 + D030055H07Rik antisense antisense MGP_WSBEiJ_T0010887.1 MGP_WSBEiJ_G0009044.1 mouse_genomes_project 9 63184101 63184228 + Gm24106 miRNA miRNA MGP_WSBEiJ_T0009098.1 MGP_WSBEiJ_G0007320.1 mouse_genomes_project 9 56132041 56138380 - Gm26631 lincRNA lincRNA MGP_WSBEiJ_T0091407.1 MGP_WSBEiJ_G0034057.1 mouse_genomes_project 9 63241880 63266963 + MGP_WSBEiJ_P0091407 Tipin protein_coding protein_coding MGP_WSBEiJ_T0010899.1 MGP_WSBEiJ_G0009056.1 mouse_genomes_project 9 94853645 94853707 + Mir7656 miRNA miRNA MGP_WSBEiJ_T0010883.1 MGP_WSBEiJ_G0009040.1 mouse_genomes_project 9 53209434 53209503 + Mir5710 miRNA miRNA MGP_WSBEiJ_T0093722.1 MGP_WSBEiJ_G0034519.1 mouse_genomes_project 9 120599537 120621327 - MGP_WSBEiJ_P0093722 Plcd1 protein_coding protein_coding MGP_WSBEiJ_T0093658.1 MGP_WSBEiJ_G0034505.1 mouse_genomes_project 9 116210323 116244945 - MGP_WSBEiJ_P0093658 Gpd1l protein_coding protein_coding MGP_WSBEiJ_T0093659.1 MGP_WSBEiJ_G0034505.1 mouse_genomes_project 9 116214331 116244835 - MGP_WSBEiJ_P0093659 Gpd1l protein_coding protein_coding MGP_WSBEiJ_T0093660.1 MGP_WSBEiJ_G0034505.1 mouse_genomes_project 9 116221933 116230314 - Gpd1l protein_coding processed_transcript MGP_WSBEiJ_T0090826.1 MGP_WSBEiJ_G0033883.1 mouse_genomes_project 9 47218226 47230269 - MGP_WSBEiJ_P0090826 Htr3a protein_coding unknown_likely_coding MGP_WSBEiJ_T0090827.1 MGP_WSBEiJ_G0033883.1 mouse_genomes_project 9 47218233 47230403 - MGP_WSBEiJ_P0090827 Htr3a protein_coding protein_coding MGP_WSBEiJ_T0092079.1 MGP_WSBEiJ_G0034212.1 mouse_genomes_project 9 86476175 86496138 - MGP_WSBEiJ_P0092079 Pgm3 protein_coding protein_coding MGP_WSBEiJ_T0092080.1 MGP_WSBEiJ_G0034212.1 mouse_genomes_project 9 86476799 86496139 - MGP_WSBEiJ_P0092080 Pgm3 protein_coding protein_coding MGP_WSBEiJ_T0092081.1 MGP_WSBEiJ_G0034212.1 mouse_genomes_project 9 86477054 86479743 - Pgm3 protein_coding retained_intron MGP_WSBEiJ_T0092082.1 MGP_WSBEiJ_G0034212.1 mouse_genomes_project 9 86477479 86496104 - Pgm3 protein_coding retained_intron MGP_WSBEiJ_T0092083.1 MGP_WSBEiJ_G0034212.1 mouse_genomes_project 9 86478325 86496153 - Pgm3 protein_coding retained_intron MGP_WSBEiJ_T0090316.1 MGP_WSBEiJ_G0033668.1 mouse_genomes_project 9 33949939 33953550 + MGP_WSBEiJ_P0090316 Gm7257 protein_coding protein_coding MGP_WSBEiJ_T0010866.1 MGP_WSBEiJ_G0009023.1 mouse_genomes_project 9 29396004 29396130 + Gm44453 miRNA miRNA MGP_WSBEiJ_T0089894.1 MGP_WSBEiJ_G0033508.1 mouse_genomes_project 9 15732544 15733510 + MGP_WSBEiJ_P0089894 Olfr829 protein_coding protein_coding MGP_WSBEiJ_T0005420.1 MGP_WSBEiJ_G0004575.1 mouse_genomes_project 9 96097031 96114036 - Gm16794 antisense antisense MGP_WSBEiJ_T0005421.1 MGP_WSBEiJ_G0004575.1 mouse_genomes_project 9 96097917 96109359 - Gm16794 antisense antisense MGP_WSBEiJ_T0005422.1 MGP_WSBEiJ_G0004575.1 mouse_genomes_project 9 96100053 96109368 - Gm16794 antisense antisense MGP_WSBEiJ_T0005423.1 MGP_WSBEiJ_G0004575.1 mouse_genomes_project 9 96100740 96110117 - Gm16794 antisense antisense MGP_WSBEiJ_T0092109.1 MGP_WSBEiJ_G0034219.1 mouse_genomes_project 9 87090387 87125235 + MGP_WSBEiJ_P0092109 Mrap2 protein_coding protein_coding MGP_WSBEiJ_T0092110.1 MGP_WSBEiJ_G0034219.1 mouse_genomes_project 9 87090387 87125235 + MGP_WSBEiJ_P0092110 Mrap2 protein_coding protein_coding MGP_WSBEiJ_T0092111.1 MGP_WSBEiJ_G0034219.1 mouse_genomes_project 9 87090424 87125235 + MGP_WSBEiJ_P0092111 Mrap2 protein_coding protein_coding MGP_WSBEiJ_T0091530.1 MGP_WSBEiJ_G0034093.1 mouse_genomes_project 9 65603336 65609465 - MGP_WSBEiJ_P0091530 Fbxl22 protein_coding protein_coding MGP_WSBEiJ_T0092777.1 MGP_WSBEiJ_G0034360.1 mouse_genomes_project 9 107517866 107573371 - MGP_WSBEiJ_P0092777 Manf protein_coding protein_coding MGP_WSBEiJ_T0092779.1 MGP_WSBEiJ_G0034360.1 mouse_genomes_project 9 107550207 107571783 - MGP_WSBEiJ_P0092779 Manf protein_coding protein_coding MGP_WSBEiJ_T0092783.1 MGP_WSBEiJ_G0034360.1 mouse_genomes_project 9 107568915 107573478 - MGP_WSBEiJ_P0092783 Manf protein_coding protein_coding MGP_WSBEiJ_T0092784.1 MGP_WSBEiJ_G0034360.1 mouse_genomes_project 9 107570253 107572914 - MGP_WSBEiJ_P0092784 Manf protein_coding protein_coding MGP_WSBEiJ_T0092785.1 MGP_WSBEiJ_G0034360.1 mouse_genomes_project 9 107570584 107573369 - MGP_WSBEiJ_P0092785 Manf protein_coding protein_coding MGP_WSBEiJ_T0092786.1 MGP_WSBEiJ_G0034360.1 mouse_genomes_project 9 107571530 107573414 - Manf protein_coding retained_intron MGP_WSBEiJ_T0092787.1 MGP_WSBEiJ_G0034360.1 mouse_genomes_project 9 107572062 107573416 - Manf protein_coding retained_intron MGP_WSBEiJ_T0093965.1 MGP_WSBEiJ_G0034601.1 mouse_genomes_project 9 126268705 126273903 + MGP_WSBEiJ_P0093965 Nlrp4g protein_coding protein_coding MGP_WSBEiJ_T0089911.1 MGP_WSBEiJ_G0033525.1 mouse_genomes_project 9 16432283 16433275 + MGP_WSBEiJ_P0089911 Olfr855 protein_coding protein_coding MGP_WSBEiJ_T0005397.1 MGP_WSBEiJ_G0004560.1 mouse_genomes_project 9 72010147 72010975 - Gm27232 antisense antisense MGP_WSBEiJ_T0090422.1 MGP_WSBEiJ_G0033713.1 mouse_genomes_project 9 35983501 35984497 + MGP_WSBEiJ_P0090422 Olfr250 protein_coding protein_coding MGP_WSBEiJ_T0091591.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68623585 68660263 + MGP_WSBEiJ_P0091591 Ice2 protein_coding protein_coding MGP_WSBEiJ_T0091592.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68623602 68659210 + Ice2 protein_coding retained_intron MGP_WSBEiJ_T0091593.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68623606 68634292 + MGP_WSBEiJ_P0091593 Ice2 protein_coding protein_coding MGP_WSBEiJ_T0091594.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68623612 68634666 + MGP_WSBEiJ_P0091594 Ice2 protein_coding protein_coding MGP_WSBEiJ_T0091595.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68623614 68634304 + MGP_WSBEiJ_P0091595 Ice2 protein_coding protein_coding MGP_WSBEiJ_T0091596.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68623616 68634923 + MGP_WSBEiJ_P0091596 Ice2 protein_coding protein_coding MGP_WSBEiJ_T0091597.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68623636 68637142 + MGP_WSBEiJ_P0091597 Ice2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091598.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68624327 68634151 + Ice2 protein_coding retained_intron MGP_WSBEiJ_T0091599.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68643669 68652640 + Ice2 protein_coding processed_transcript MGP_WSBEiJ_T0091600.1 MGP_WSBEiJ_G0034107.1 mouse_genomes_project 9 68643827 68653959 + Ice2 protein_coding retained_intron MGP_WSBEiJ_T0000317.1 MGP_WSBEiJ_G0000265.1 mouse_genomes_project 9 124864587 124864654 + mt-Tc Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0089709.1 MGP_WSBEiJ_G0033444.1 mouse_genomes_project 9 4004659 4028878 + MGP_WSBEiJ_P0089709 protein_coding protein_coding MGP_WSBEiJ_T0091849.1 MGP_WSBEiJ_G0034160.1 mouse_genomes_project 9 75143715 75190387 - MGP_WSBEiJ_P0091849 Scg3 protein_coding protein_coding MGP_WSBEiJ_T0098589.1 MGP_WSBEiJ_G0037252.1 mouse_genomes_project 9 32871488 32871650 + Gm25630 snRNA snRNA MGP_WSBEiJ_T0009094.1 MGP_WSBEiJ_G0007316.1 mouse_genomes_project 9 51727818 51744704 + 4930510E17Rik lincRNA lincRNA MGP_WSBEiJ_T0091037.1 MGP_WSBEiJ_G0033955.1 mouse_genomes_project 9 53662514 53720130 + MGP_WSBEiJ_P0091037 Ube2q2 protein_coding protein_coding MGP_WSBEiJ_T0091038.1 MGP_WSBEiJ_G0033955.1 mouse_genomes_project 9 53662758 53721267 + MGP_WSBEiJ_P0091038 Ube2q2 protein_coding protein_coding MGP_WSBEiJ_T0091039.1 MGP_WSBEiJ_G0033955.1 mouse_genomes_project 9 53707616 53719941 + Ube2q2 protein_coding retained_intron MGP_WSBEiJ_T0002398.1 MGP_WSBEiJ_G0002314.1 mouse_genomes_project 9 103586932 103589406 + TEC TEC MGP_WSBEiJ_T0099880.1 MGP_WSBEiJ_G0038543.1 mouse_genomes_project 9 100069482 100069609 - Gm23949 snoRNA snoRNA MGP_WSBEiJ_T0090840.1 MGP_WSBEiJ_G0033891.1 mouse_genomes_project 9 47785598 47834672 - MGP_WSBEiJ_P0090840 Ttc12 protein_coding protein_coding MGP_WSBEiJ_T0090841.1 MGP_WSBEiJ_G0033891.1 mouse_genomes_project 9 47806187 47834662 - Ttc12 protein_coding retained_intron MGP_WSBEiJ_T0090108.1 MGP_WSBEiJ_G0033600.1 mouse_genomes_project 9 19169652 19182612 + MGP_WSBEiJ_P0090108 Zfp872 protein_coding protein_coding MGP_WSBEiJ_T0090109.1 MGP_WSBEiJ_G0033600.1 mouse_genomes_project 9 19177553 19181279 + MGP_WSBEiJ_P0090109 Zfp872 protein_coding protein_coding MGP_WSBEiJ_T0002356.1 MGP_WSBEiJ_G0002272.1 mouse_genomes_project 9 86650367 86652889 + TEC TEC MGP_WSBEiJ_T0090812.1 MGP_WSBEiJ_G0033875.1 mouse_genomes_project 9 46624112 46648298 - MGP_WSBEiJ_P0090812 Nxpe2 protein_coding protein_coding MGP_WSBEiJ_T0090813.1 MGP_WSBEiJ_G0033875.1 mouse_genomes_project 9 46625256 46648234 - MGP_WSBEiJ_P0090813 Nxpe2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090814.1 MGP_WSBEiJ_G0033875.1 mouse_genomes_project 9 46637733 46648254 - Nxpe2 protein_coding processed_transcript MGP_WSBEiJ_T0099858.1 MGP_WSBEiJ_G0038521.1 mouse_genomes_project 9 63132334 63132404 + Gm22571 snoRNA snoRNA MGP_WSBEiJ_T0009151.1 MGP_WSBEiJ_G0007362.1 mouse_genomes_project 9 92962650 92985081 + Gm28054 lincRNA lincRNA MGP_WSBEiJ_T0091139.1 MGP_WSBEiJ_G0033986.1 mouse_genomes_project 9 56145013 56153823 - MGP_WSBEiJ_P0091139 Mpi protein_coding protein_coding MGP_WSBEiJ_T0091140.1 MGP_WSBEiJ_G0033986.1 mouse_genomes_project 9 56149023 56153326 - Mpi protein_coding retained_intron MGP_WSBEiJ_T0091141.1 MGP_WSBEiJ_G0033986.1 mouse_genomes_project 9 56149352 56150435 - Mpi protein_coding retained_intron MGP_WSBEiJ_T0091142.1 MGP_WSBEiJ_G0033986.1 mouse_genomes_project 9 56149892 56153769 - MGP_WSBEiJ_P0091142 Mpi protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091143.1 MGP_WSBEiJ_G0033986.1 mouse_genomes_project 9 56150738 56153776 - Mpi protein_coding retained_intron MGP_WSBEiJ_T0092363.1 MGP_WSBEiJ_G0034276.1 mouse_genomes_project 9 99164670 99166174 + MGP_WSBEiJ_P0092363 7420426K07Rik protein_coding protein_coding MGP_WSBEiJ_T0005389.1 MGP_WSBEiJ_G0004554.1 mouse_genomes_project 9 68571975 68589368 - Gm15511 antisense antisense MGP_WSBEiJ_T0009196.1 MGP_WSBEiJ_G0007395.1 mouse_genomes_project 9 115563004 115631102 - lincRNA lincRNA MGP_WSBEiJ_T0009199.1 MGP_WSBEiJ_G0007398.1 mouse_genomes_project 9 119895285 119897284 - Platr11 lincRNA lincRNA MGP_WSBEiJ_T0090471.1 MGP_WSBEiJ_G0033756.1 mouse_genomes_project 9 37355755 37356810 - MGP_WSBEiJ_P0090471 Olfr959 protein_coding protein_coding MGP_WSBEiJ_T0090846.1 MGP_WSBEiJ_G0033893.1 mouse_genomes_project 9 47866595 47912971 + MGP_WSBEiJ_P0090846 Gm11149 protein_coding protein_coding MGP_WSBEiJ_T0010906.1 MGP_WSBEiJ_G0009063.1 mouse_genomes_project 9 108790026 108790112 + Mir7088 miRNA miRNA MGP_WSBEiJ_T0093857.1 MGP_WSBEiJ_G0034561.1 mouse_genomes_project 9 123548776 123559996 - MGP_WSBEiJ_P0093857 Higd1a protein_coding protein_coding MGP_WSBEiJ_T0090083.1 MGP_WSBEiJ_G0033587.1 mouse_genomes_project 9 18891413 18905119 + MGP_WSBEiJ_P0090083 Plppr2 protein_coding protein_coding MGP_WSBEiJ_T0090084.1 MGP_WSBEiJ_G0033587.1 mouse_genomes_project 9 18893354 18904226 + MGP_WSBEiJ_P0090084 Plppr2 protein_coding protein_coding MGP_WSBEiJ_T0091843.1 MGP_WSBEiJ_G0034156.1 mouse_genomes_project 9 74929782 74955409 + MGP_WSBEiJ_P0091843 Leo1 protein_coding protein_coding MGP_WSBEiJ_T0015616.1 MGP_WSBEiJ_G0013746.1 mouse_genomes_project 9 100756477 100756742 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093887.1 MGP_WSBEiJ_G0034575.1 mouse_genomes_project 9 124670788 124678740 + MGP_WSBEiJ_P0093887 Zfp105 protein_coding protein_coding MGP_WSBEiJ_T0093888.1 MGP_WSBEiJ_G0034575.1 mouse_genomes_project 9 124670815 124677390 + MGP_WSBEiJ_P0093888 Zfp105 protein_coding protein_coding MGP_WSBEiJ_T0091372.1 MGP_WSBEiJ_G0034048.1 mouse_genomes_project 9 62524817 62565440 + MGP_WSBEiJ_P0091372 Aagab protein_coding protein_coding MGP_WSBEiJ_T0090401.1 MGP_WSBEiJ_G0033693.1 mouse_genomes_project 9 35318517 35319450 + MGP_WSBEiJ_P0090401 Olfr874 protein_coding protein_coding MGP_WSBEiJ_T0005441.1 MGP_WSBEiJ_G0004590.1 mouse_genomes_project 9 106048365 106058012 + Gm19667 antisense antisense MGP_WSBEiJ_T0092522.1 MGP_WSBEiJ_G0034312.1 mouse_genomes_project 9 103724880 103763148 - MGP_WSBEiJ_P0092522 1300017J02Rik protein_coding protein_coding MGP_WSBEiJ_T0092523.1 MGP_WSBEiJ_G0034312.1 mouse_genomes_project 9 103724881 103731459 - 1300017J02Rik protein_coding retained_intron MGP_WSBEiJ_T0092524.1 MGP_WSBEiJ_G0034312.1 mouse_genomes_project 9 103724983 103763075 - MGP_WSBEiJ_P0092524 1300017J02Rik protein_coding protein_coding MGP_WSBEiJ_T0092525.1 MGP_WSBEiJ_G0034312.1 mouse_genomes_project 9 103726196 103740909 - MGP_WSBEiJ_P0092525 1300017J02Rik protein_coding protein_coding MGP_WSBEiJ_T0092526.1 MGP_WSBEiJ_G0034312.1 mouse_genomes_project 9 103745480 103763148 - 1300017J02Rik protein_coding processed_transcript MGP_WSBEiJ_T0092527.1 MGP_WSBEiJ_G0034312.1 mouse_genomes_project 9 103757779 103775542 - MGP_WSBEiJ_P0092527 1300017J02Rik protein_coding protein_coding MGP_WSBEiJ_T0089719.1 MGP_WSBEiJ_G0033448.1 mouse_genomes_project 9 4311416 4328549 + MGP_WSBEiJ_P0089719 Mmp1a protein_coding protein_coding MGP_WSBEiJ_T0099878.1 MGP_WSBEiJ_G0038541.1 mouse_genomes_project 9 95755503 95755613 + Gm25582 snoRNA snoRNA MGP_WSBEiJ_T0099877.1 MGP_WSBEiJ_G0038540.1 mouse_genomes_project 9 92598252 92598383 - Gm25417 snoRNA snoRNA MGP_WSBEiJ_T0092430.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 100958344 101110023 + MGP_WSBEiJ_P0092430 Stag1 protein_coding protein_coding MGP_WSBEiJ_T0092431.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101007926 101342381 + MGP_WSBEiJ_P0092431 Stag1 protein_coding protein_coding MGP_WSBEiJ_T0092432.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101007926 101175820 + MGP_WSBEiJ_P0092432 Stag1 protein_coding protein_coding MGP_WSBEiJ_T0092433.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101008078 101111622 + Stag1 protein_coding retained_intron MGP_WSBEiJ_T0092434.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101008091 101083543 + Stag1 protein_coding retained_intron MGP_WSBEiJ_T0092435.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101008091 101083562 + Stag1 protein_coding retained_intron MGP_WSBEiJ_T0092436.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101008091 101342380 + MGP_WSBEiJ_P0092436 Stag1 protein_coding protein_coding MGP_WSBEiJ_T0092437.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101008094 101249950 + MGP_WSBEiJ_P0092437 Stag1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092438.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101008114 101341234 + MGP_WSBEiJ_P0092438 Stag1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092439.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101008246 101341241 + MGP_WSBEiJ_P0092439 Stag1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092440.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101008248 101148624 + MGP_WSBEiJ_P0092440 Stag1 protein_coding protein_coding MGP_WSBEiJ_T0092441.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101175732 101341251 + Stag1 protein_coding processed_transcript MGP_WSBEiJ_T0092442.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101215438 101228378 + Stag1 protein_coding retained_intron MGP_WSBEiJ_T0092443.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101224238 101340669 + MGP_WSBEiJ_P0092443 Stag1 protein_coding protein_coding MGP_WSBEiJ_T0092444.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101227354 101236612 + Stag1 protein_coding retained_intron MGP_WSBEiJ_T0092445.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101271280 101335491 + MGP_WSBEiJ_P0092445 Stag1 protein_coding protein_coding MGP_WSBEiJ_T0092446.1 MGP_WSBEiJ_G0034294.1 mouse_genomes_project 9 101339603 101343211 + Stag1 protein_coding retained_intron MGP_WSBEiJ_T0093859.1 MGP_WSBEiJ_G0034563.1 mouse_genomes_project 9 123626414 123628364 - MGP_WSBEiJ_P0093859 Cyp8b1 protein_coding protein_coding MGP_WSBEiJ_T0090319.1 MGP_WSBEiJ_G0033671.1 mouse_genomes_project 9 34084300 34085658 - MGP_WSBEiJ_P0090319 Gm17689 protein_coding protein_coding MGP_WSBEiJ_T0002375.1 MGP_WSBEiJ_G0002291.1 mouse_genomes_project 9 97514249 97516129 + TEC TEC MGP_WSBEiJ_T0089836.1 MGP_WSBEiJ_G0033485.1 mouse_genomes_project 9 11797026 11841836 - MGP_WSBEiJ_P0089836 Panx1 protein_coding protein_coding MGP_WSBEiJ_T0089837.1 MGP_WSBEiJ_G0033485.1 mouse_genomes_project 9 11800685 11842277 - MGP_WSBEiJ_P0089837 Panx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089838.1 MGP_WSBEiJ_G0033485.1 mouse_genomes_project 9 11802818 11805407 - Panx1 protein_coding retained_intron MGP_WSBEiJ_T0015556.1 MGP_WSBEiJ_G0013686.1 mouse_genomes_project 9 74570569 74571112 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091357.1 MGP_WSBEiJ_G0034043.1 mouse_genomes_project 9 61778054 61885021 - MGP_WSBEiJ_P0091357 Pias1 protein_coding protein_coding MGP_WSBEiJ_T0090069.1 MGP_WSBEiJ_G0033581.1 mouse_genomes_project 9 18713262 18753954 - MGP_WSBEiJ_P0090069 Kank2 protein_coding protein_coding MGP_WSBEiJ_T0092861.1 MGP_WSBEiJ_G0034374.1 mouse_genomes_project 9 108251640 108256470 + MGP_WSBEiJ_P0092861 Hyal2 protein_coding protein_coding MGP_WSBEiJ_T0092862.1 MGP_WSBEiJ_G0034374.1 mouse_genomes_project 9 108251640 108254085 + MGP_WSBEiJ_P0092862 Hyal2 protein_coding protein_coding MGP_WSBEiJ_T0092863.1 MGP_WSBEiJ_G0034374.1 mouse_genomes_project 9 108252807 108256467 + MGP_WSBEiJ_P0092863 Hyal2 protein_coding protein_coding MGP_WSBEiJ_T0092864.1 MGP_WSBEiJ_G0034374.1 mouse_genomes_project 9 108252831 108255654 + MGP_WSBEiJ_P0092864 Hyal2 protein_coding protein_coding MGP_WSBEiJ_T0092865.1 MGP_WSBEiJ_G0034374.1 mouse_genomes_project 9 108253085 108254303 + MGP_WSBEiJ_P0092865 Hyal2 protein_coding protein_coding MGP_WSBEiJ_T0092866.1 MGP_WSBEiJ_G0034374.1 mouse_genomes_project 9 108253495 108256463 + MGP_WSBEiJ_P0092866 Hyal2 protein_coding protein_coding MGP_WSBEiJ_T0092867.1 MGP_WSBEiJ_G0034374.1 mouse_genomes_project 9 108254900 108255894 + Hyal2 protein_coding retained_intron MGP_WSBEiJ_T0005456.1 MGP_WSBEiJ_G0004601.1 mouse_genomes_project 9 108242501 108252108 - Gm9917 antisense antisense MGP_WSBEiJ_T0005457.1 MGP_WSBEiJ_G0004601.1 mouse_genomes_project 9 108246529 108252111 - Gm9917 antisense antisense MGP_WSBEiJ_T0005458.1 MGP_WSBEiJ_G0004601.1 mouse_genomes_project 9 108247435 108250620 - Gm9917 antisense antisense MGP_WSBEiJ_T0005459.1 MGP_WSBEiJ_G0004601.1 mouse_genomes_project 9 108248039 108250476 - Gm9917 antisense antisense MGP_WSBEiJ_T0092301.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96875694 96948211 - MGP_WSBEiJ_P0092301 Zbtb38 protein_coding protein_coding MGP_WSBEiJ_T0092302.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96878317 96926040 - MGP_WSBEiJ_P0092302 Zbtb38 protein_coding protein_coding MGP_WSBEiJ_T0092303.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96879152 96913524 - MGP_WSBEiJ_P0092303 Zbtb38 protein_coding non_stop_decay MGP_WSBEiJ_T0092304.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96880292 96913974 - MGP_WSBEiJ_P0092304 Zbtb38 protein_coding protein_coding MGP_WSBEiJ_T0092305.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96881371 96913239 - MGP_WSBEiJ_P0092305 Zbtb38 protein_coding protein_coding MGP_WSBEiJ_T0092306.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96911883 96923403 - Zbtb38 protein_coding processed_transcript MGP_WSBEiJ_T0092307.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96924217 96948065 - Zbtb38 protein_coding retained_intron MGP_WSBEiJ_T0092308.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96924217 96925708 - Zbtb38 protein_coding processed_transcript MGP_WSBEiJ_T0092309.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96925825 96927135 - Zbtb38 protein_coding processed_transcript MGP_WSBEiJ_T0092310.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96925922 96927034 - Zbtb38 protein_coding retained_intron MGP_WSBEiJ_T0092311.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96942651 96948107 - Zbtb38 protein_coding retained_intron MGP_WSBEiJ_T0092312.1 MGP_WSBEiJ_G0034262.1 mouse_genomes_project 9 96942853 96948073 - Zbtb38 protein_coding processed_transcript MGP_WSBEiJ_T0015612.1 MGP_WSBEiJ_G0013742.1 mouse_genomes_project 9 97453203 97454239 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090312.1 MGP_WSBEiJ_G0033664.1 mouse_genomes_project 9 33182241 33183826 - MGP_WSBEiJ_P0090312 Gm17727 protein_coding protein_coding MGP_WSBEiJ_T0005404.1 MGP_WSBEiJ_G0004567.1 mouse_genomes_project 9 81392434 81406288 + D430036J16Rik antisense antisense MGP_WSBEiJ_T0005405.1 MGP_WSBEiJ_G0004567.1 mouse_genomes_project 9 81392813 81406815 + D430036J16Rik antisense antisense MGP_WSBEiJ_T0005406.1 MGP_WSBEiJ_G0004567.1 mouse_genomes_project 9 81392916 81405854 + D430036J16Rik antisense antisense MGP_WSBEiJ_T0005407.1 MGP_WSBEiJ_G0004567.1 mouse_genomes_project 9 81393241 81406744 + D430036J16Rik antisense antisense MGP_WSBEiJ_T0005408.1 MGP_WSBEiJ_G0004567.1 mouse_genomes_project 9 81393301 81406011 + D430036J16Rik antisense antisense MGP_WSBEiJ_T0098586.1 MGP_WSBEiJ_G0037249.1 mouse_genomes_project 9 19793823 19793908 - Gm27639 snRNA snRNA MGP_WSBEiJ_T0091644.1 MGP_WSBEiJ_G0034120.1 mouse_genomes_project 9 69984456 70087399 + MGP_WSBEiJ_P0091644 Adam10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091645.1 MGP_WSBEiJ_G0034120.1 mouse_genomes_project 9 69984456 70089245 + MGP_WSBEiJ_P0091645 Adam10 protein_coding protein_coding MGP_WSBEiJ_T0091646.1 MGP_WSBEiJ_G0034120.1 mouse_genomes_project 9 69984475 70056586 + MGP_WSBEiJ_P0091646 Adam10 protein_coding protein_coding MGP_WSBEiJ_T0091647.1 MGP_WSBEiJ_G0034120.1 mouse_genomes_project 9 70085068 70087395 + Adam10 protein_coding retained_intron MGP_WSBEiJ_T0090935.1 MGP_WSBEiJ_G0033913.1 mouse_genomes_project 9 49448695 49479493 - MGP_WSBEiJ_P0090935 Layn protein_coding protein_coding MGP_WSBEiJ_T0099893.1 MGP_WSBEiJ_G0038556.1 mouse_genomes_project 9 114921859 114921976 - Gm25059 snoRNA snoRNA MGP_WSBEiJ_T0005427.1 MGP_WSBEiJ_G0004578.1 mouse_genomes_project 9 96899504 96905126 + A930006L05Rik antisense antisense MGP_WSBEiJ_T0009124.1 MGP_WSBEiJ_G0007341.1 mouse_genomes_project 9 74893424 74900381 + 4933433G15Rik lincRNA lincRNA MGP_WSBEiJ_T0009125.1 MGP_WSBEiJ_G0007341.1 mouse_genomes_project 9 74893424 74902553 + 4933433G15Rik lincRNA lincRNA MGP_WSBEiJ_T0010848.1 MGP_WSBEiJ_G0009005.1 mouse_genomes_project 9 1198462 1198546 - Gm23811 miRNA miRNA MGP_WSBEiJ_T0098622.1 MGP_WSBEiJ_G0037285.1 mouse_genomes_project 9 82246910 82246971 - Gm22836 snRNA snRNA MGP_WSBEiJ_T0098614.1 MGP_WSBEiJ_G0037277.1 mouse_genomes_project 9 69813966 69814073 - Gm23730 snRNA snRNA MGP_WSBEiJ_T0091790.1 MGP_WSBEiJ_G0034144.1 mouse_genomes_project 9 72546537 72558746 + MGP_WSBEiJ_P0091790 Rsl24d1 protein_coding protein_coding MGP_WSBEiJ_T0091791.1 MGP_WSBEiJ_G0034144.1 mouse_genomes_project 9 72546559 72559854 + MGP_WSBEiJ_P0091791 Rsl24d1 protein_coding protein_coding MGP_WSBEiJ_T0091792.1 MGP_WSBEiJ_G0034144.1 mouse_genomes_project 9 72546614 72558603 + MGP_WSBEiJ_P0091792 Rsl24d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091793.1 MGP_WSBEiJ_G0034144.1 mouse_genomes_project 9 72548272 72558416 + MGP_WSBEiJ_P0091793 Rsl24d1 protein_coding protein_coding MGP_WSBEiJ_T0093863.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123834826 123855890 + MGP_WSBEiJ_P0093863 Snrk protein_coding protein_coding MGP_WSBEiJ_T0093864.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123834835 123886706 + MGP_WSBEiJ_P0093864 Snrk protein_coding unknown_likely_coding MGP_WSBEiJ_T0093865.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123834853 123855998 + MGP_WSBEiJ_P0093865 Snrk protein_coding protein_coding MGP_WSBEiJ_T0093866.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123834882 123888681 + MGP_WSBEiJ_P0093866 Snrk protein_coding protein_coding MGP_WSBEiJ_T0093867.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123834890 123885803 + MGP_WSBEiJ_P0093867 Snrk protein_coding protein_coding MGP_WSBEiJ_T0093868.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123834902 123855845 + MGP_WSBEiJ_P0093868 Snrk protein_coding protein_coding MGP_WSBEiJ_T0093869.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123835295 123855690 + Snrk protein_coding processed_transcript MGP_WSBEiJ_T0093870.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123879774 123885805 + Snrk protein_coding retained_intron MGP_WSBEiJ_T0093871.1 MGP_WSBEiJ_G0034567.1 mouse_genomes_project 9 123883281 123885904 + Snrk protein_coding retained_intron MGP_WSBEiJ_T0093649.1 MGP_WSBEiJ_G0034497.1 mouse_genomes_project 9 115759843 115765571 - MGP_WSBEiJ_P0093649 Ccr4 protein_coding protein_coding MGP_WSBEiJ_T0002306.1 MGP_WSBEiJ_G0002223.1 mouse_genomes_project 9 29863023 29865654 - TEC TEC MGP_WSBEiJ_T0005426.1 MGP_WSBEiJ_G0004577.1 mouse_genomes_project 9 96185163 96198737 - Gm28085 antisense antisense MGP_WSBEiJ_T0017990.1 MGP_WSBEiJ_G0015182.1 mouse_genomes_project 9 118700422 118702588 + Gm17396 processed_transcript processed_transcript MGP_WSBEiJ_T0009175.1 MGP_WSBEiJ_G0007381.1 mouse_genomes_project 9 104874699 104898379 + Gm28548 lincRNA lincRNA MGP_WSBEiJ_T0098630.1 MGP_WSBEiJ_G0037293.1 mouse_genomes_project 9 91890004 91890109 + Gm26101 snRNA snRNA MGP_WSBEiJ_T0090163.1 MGP_WSBEiJ_G0033622.1 mouse_genomes_project 9 24081172 24098737 - Acad8 protein_coding retained_intron MGP_WSBEiJ_T0090164.1 MGP_WSBEiJ_G0033622.1 mouse_genomes_project 9 24081172 24107136 - MGP_WSBEiJ_P0090164 Acad8 protein_coding protein_coding MGP_WSBEiJ_T0090165.1 MGP_WSBEiJ_G0033622.1 mouse_genomes_project 9 24081181 24107119 - MGP_WSBEiJ_P0090165 Acad8 protein_coding protein_coding MGP_WSBEiJ_T0090166.1 MGP_WSBEiJ_G0033622.1 mouse_genomes_project 9 24082412 24084987 - Acad8 protein_coding retained_intron MGP_WSBEiJ_T0090167.1 MGP_WSBEiJ_G0033622.1 mouse_genomes_project 9 24086230 24107078 - MGP_WSBEiJ_P0090167 Acad8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090168.1 MGP_WSBEiJ_G0033622.1 mouse_genomes_project 9 24086291 24107076 - MGP_WSBEiJ_P0090168 Acad8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090169.1 MGP_WSBEiJ_G0033622.1 mouse_genomes_project 9 24098706 24107075 - Acad8 protein_coding retained_intron MGP_WSBEiJ_T0093163.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109253430 109261659 + MGP_WSBEiJ_P0093163 Qars protein_coding protein_coding MGP_WSBEiJ_T0093164.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109253775 109256805 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093165.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109253775 109257916 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093166.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109253775 109256789 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093167.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109253788 109261654 + MGP_WSBEiJ_P0093167 Qars protein_coding protein_coding MGP_WSBEiJ_T0093168.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109255196 109261654 + MGP_WSBEiJ_P0093168 Qars protein_coding protein_coding MGP_WSBEiJ_T0093169.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109257267 109259115 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093170.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109257327 109258609 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093171.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109258823 109259904 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093172.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109258826 109260876 + MGP_WSBEiJ_P0093172 Qars protein_coding protein_coding MGP_WSBEiJ_T0093173.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109258847 109259681 + Qars protein_coding processed_transcript MGP_WSBEiJ_T0093174.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109259261 109259848 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093175.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109259443 109260076 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093176.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109259781 109261654 + MGP_WSBEiJ_P0093176 Qars protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093177.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109260465 109260913 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093178.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109260468 109261647 + Qars protein_coding retained_intron MGP_WSBEiJ_T0093179.1 MGP_WSBEiJ_G0034417.1 mouse_genomes_project 9 109260536 109261654 + Qars protein_coding retained_intron MGP_WSBEiJ_T0090837.1 MGP_WSBEiJ_G0033888.1 mouse_genomes_project 9 47613817 47624034 + MGP_WSBEiJ_P0090837 protein_coding protein_coding MGP_WSBEiJ_T0090369.1 MGP_WSBEiJ_G0033680.1 mouse_genomes_project 9 34764743 34790890 - MGP_WSBEiJ_P0090369 Slc37a2 protein_coding protein_coding MGP_WSBEiJ_T0090370.1 MGP_WSBEiJ_G0033680.1 mouse_genomes_project 9 34765910 34790566 - MGP_WSBEiJ_P0090370 Slc37a2 protein_coding protein_coding MGP_WSBEiJ_T0090371.1 MGP_WSBEiJ_G0033680.1 mouse_genomes_project 9 34766106 34770749 - Slc37a2 protein_coding retained_intron MGP_WSBEiJ_T0015582.1 MGP_WSBEiJ_G0013712.1 mouse_genomes_project 9 87709137 87709639 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090214.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28682128 28717869 + MGP_WSBEiJ_P0090214 Nfrkb protein_coding protein_coding MGP_WSBEiJ_T0090215.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28682133 28717869 + MGP_WSBEiJ_P0090215 Nfrkb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090216.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28682140 28691599 + MGP_WSBEiJ_P0090216 Nfrkb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090217.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28682142 28716716 + MGP_WSBEiJ_P0090217 Nfrkb protein_coding unknown_likely_coding MGP_WSBEiJ_T0090218.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28682143 28716716 + MGP_WSBEiJ_P0090218 Nfrkb protein_coding unknown_likely_coding MGP_WSBEiJ_T0090219.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28682149 28717869 + MGP_WSBEiJ_P0090219 Nfrkb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090220.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28689641 28696052 + Nfrkb protein_coding retained_intron MGP_WSBEiJ_T0090221.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28694085 28696024 + Nfrkb protein_coding retained_intron MGP_WSBEiJ_T0090222.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28696072 28717869 + Nfrkb protein_coding retained_intron MGP_WSBEiJ_T0090223.1 MGP_WSBEiJ_G0033638.1 mouse_genomes_project 9 28705197 28706243 + Nfrkb protein_coding retained_intron MGP_WSBEiJ_T0009118.1 MGP_WSBEiJ_G0007335.1 mouse_genomes_project 9 71905475 71918733 - 4930509E16Rik lincRNA lincRNA MGP_WSBEiJ_T0002400.1 MGP_WSBEiJ_G0002316.1 mouse_genomes_project 9 103925750 103926068 + TEC TEC MGP_WSBEiJ_T0015560.1 MGP_WSBEiJ_G0013690.1 mouse_genomes_project 9 76331956 76332854 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091146.1 MGP_WSBEiJ_G0033989.1 mouse_genomes_project 9 56205360 56211615 - MGP_WSBEiJ_P0091146 Cplx3 protein_coding protein_coding MGP_WSBEiJ_T0098579.1 MGP_WSBEiJ_G0037242.1 mouse_genomes_project 9 10080882 10080989 + Gm26189 snRNA snRNA MGP_WSBEiJ_T0090891.1 MGP_WSBEiJ_G0033907.1 mouse_genomes_project 9 49135761 49139637 + MGP_WSBEiJ_P0090891 Cryab protein_coding protein_coding MGP_WSBEiJ_T0092046.1 MGP_WSBEiJ_G0034207.1 mouse_genomes_project 9 85206469 85214451 - MGP_WSBEiJ_P0092046 Fam46a protein_coding protein_coding MGP_WSBEiJ_T0092047.1 MGP_WSBEiJ_G0034207.1 mouse_genomes_project 9 85206469 85214227 - MGP_WSBEiJ_P0092047 Fam46a protein_coding protein_coding MGP_WSBEiJ_T0090325.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34198780 34216703 - MGP_WSBEiJ_P0090325 Chek1 protein_coding protein_coding MGP_WSBEiJ_T0090326.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34198780 34216987 - MGP_WSBEiJ_P0090326 Chek1 protein_coding protein_coding MGP_WSBEiJ_T0090327.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34199742 34216914 - MGP_WSBEiJ_P0090327 Chek1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090328.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34200459 34216197 - MGP_WSBEiJ_P0090328 Chek1 protein_coding protein_coding MGP_WSBEiJ_T0090329.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34200459 34216197 - MGP_WSBEiJ_P0090329 Chek1 protein_coding protein_coding MGP_WSBEiJ_T0090330.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34204056 34213056 - Chek1 protein_coding retained_intron MGP_WSBEiJ_T0090331.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34212959 34217394 - Chek1 protein_coding processed_transcript MGP_WSBEiJ_T0090332.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34213913 34216899 - Chek1 protein_coding retained_intron MGP_WSBEiJ_T0090333.1 MGP_WSBEiJ_G0033674.1 mouse_genomes_project 9 34214172 34216780 - MGP_WSBEiJ_P0090333 Chek1 protein_coding protein_coding MGP_WSBEiJ_T0089903.1 MGP_WSBEiJ_G0033517.1 mouse_genomes_project 9 16205193 16206091 + MGP_WSBEiJ_P0089903 Olfr845 protein_coding protein_coding MGP_WSBEiJ_T0093180.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262523 109279785 + MGP_WSBEiJ_P0093180 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093181.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262804 109274764 + MGP_WSBEiJ_P0093181 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093182.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262820 109264372 + Qrich1 protein_coding processed_transcript MGP_WSBEiJ_T0093183.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262820 109291216 + MGP_WSBEiJ_P0093183 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093184.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262827 109305911 + MGP_WSBEiJ_P0093184 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093185.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262831 109306082 + MGP_WSBEiJ_P0093185 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093186.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262869 109274750 + MGP_WSBEiJ_P0093186 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093187.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262872 109274790 + MGP_WSBEiJ_P0093187 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093188.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109262873 109290985 + MGP_WSBEiJ_P0093188 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093189.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109263180 109276518 + Qrich1 protein_coding retained_intron MGP_WSBEiJ_T0093190.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109263204 109274786 + MGP_WSBEiJ_P0093190 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093191.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109274302 109279535 + MGP_WSBEiJ_P0093191 Qrich1 protein_coding protein_coding MGP_WSBEiJ_T0093192.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109302100 109305487 + Qrich1 protein_coding retained_intron MGP_WSBEiJ_T0093193.1 MGP_WSBEiJ_G0034418.1 mouse_genomes_project 9 109302438 109305318 + Qrich1 protein_coding retained_intron MGP_WSBEiJ_T0092313.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97024383 97092307 - MGP_WSBEiJ_P0092313 Pxylp1 protein_coding protein_coding MGP_WSBEiJ_T0092314.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97024391 97092323 - MGP_WSBEiJ_P0092314 Pxylp1 protein_coding protein_coding MGP_WSBEiJ_T0092315.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97024391 97092368 - MGP_WSBEiJ_P0092315 Pxylp1 protein_coding protein_coding MGP_WSBEiJ_T0092316.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97024633 97092327 - MGP_WSBEiJ_P0092316 Pxylp1 protein_coding protein_coding MGP_WSBEiJ_T0092317.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97026463 97092322 - MGP_WSBEiJ_P0092317 Pxylp1 protein_coding protein_coding MGP_WSBEiJ_T0092318.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97026634 97065827 - MGP_WSBEiJ_P0092318 Pxylp1 protein_coding protein_coding MGP_WSBEiJ_T0092319.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97040976 97057848 - Pxylp1 protein_coding processed_transcript MGP_WSBEiJ_T0092320.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97041086 97095563 - MGP_WSBEiJ_P0092320 Pxylp1 protein_coding protein_coding MGP_WSBEiJ_T0092321.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97041775 97092314 - Pxylp1 protein_coding retained_intron MGP_WSBEiJ_T0092322.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97041892 97065904 - MGP_WSBEiJ_P0092322 Pxylp1 protein_coding protein_coding MGP_WSBEiJ_T0092323.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97059393 97065906 - Pxylp1 protein_coding processed_transcript MGP_WSBEiJ_T0092324.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97063726 97094984 - Pxylp1 protein_coding processed_transcript MGP_WSBEiJ_T0092325.1 MGP_WSBEiJ_G0034263.1 mouse_genomes_project 9 97090524 97092327 - Pxylp1 protein_coding retained_intron MGP_WSBEiJ_T0015502.1 MGP_WSBEiJ_G0013632.1 mouse_genomes_project 9 11503536 11504064 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093950.1 MGP_WSBEiJ_G0034598.1 mouse_genomes_project 9 125858114 125869678 + MGP_WSBEiJ_P0093950 Ccr2 protein_coding protein_coding MGP_WSBEiJ_T0093951.1 MGP_WSBEiJ_G0034598.1 mouse_genomes_project 9 125858310 125865261 + MGP_WSBEiJ_P0093951 Ccr2 protein_coding protein_coding MGP_WSBEiJ_T0093952.1 MGP_WSBEiJ_G0034598.1 mouse_genomes_project 9 125858335 125864671 + MGP_WSBEiJ_P0093952 Ccr2 protein_coding protein_coding MGP_WSBEiJ_T0093953.1 MGP_WSBEiJ_G0034598.1 mouse_genomes_project 9 125861746 125865261 + MGP_WSBEiJ_P0093953 Ccr2 protein_coding protein_coding MGP_WSBEiJ_T0091086.1 MGP_WSBEiJ_G0033967.1 mouse_genomes_project 9 54947583 55027712 + MGP_WSBEiJ_P0091086 Hmg20a protein_coding unknown_likely_coding MGP_WSBEiJ_T0099863.1 MGP_WSBEiJ_G0038526.1 mouse_genomes_project 9 67442704 67442834 + Gm22382 snoRNA snoRNA MGP_WSBEiJ_T0091972.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 79938767 80091844 + MGP_WSBEiJ_P0091972 Myo6 protein_coding protein_coding MGP_WSBEiJ_T0091973.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 79938774 79941819 + Myo6 protein_coding retained_intron MGP_WSBEiJ_T0091974.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 79938776 80091843 + MGP_WSBEiJ_P0091974 Myo6 protein_coding protein_coding MGP_WSBEiJ_T0091975.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 79938963 80088209 + MGP_WSBEiJ_P0091975 Myo6 protein_coding protein_coding MGP_WSBEiJ_T0091976.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 79993977 80088162 + MGP_WSBEiJ_P0091976 Myo6 protein_coding protein_coding MGP_WSBEiJ_T0091977.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 79993995 80091844 + MGP_WSBEiJ_P0091977 Myo6 protein_coding protein_coding MGP_WSBEiJ_T0091978.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 79994003 80091844 + MGP_WSBEiJ_P0091978 Myo6 protein_coding protein_coding MGP_WSBEiJ_T0091979.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 80041185 80045806 + Myo6 protein_coding retained_intron MGP_WSBEiJ_T0091980.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 80064974 80066064 + Myo6 protein_coding retained_intron MGP_WSBEiJ_T0091981.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 80065837 80072329 + Myo6 protein_coding retained_intron MGP_WSBEiJ_T0091982.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 80085876 80087907 + Myo6 protein_coding processed_transcript MGP_WSBEiJ_T0091983.1 MGP_WSBEiJ_G0034195.1 mouse_genomes_project 9 80087025 80088715 + Myo6 protein_coding retained_intron MGP_WSBEiJ_T0011553.1 MGP_WSBEiJ_G0009710.1 mouse_genomes_project 9 124552074 124552342 + Gm25341 misc_RNA misc_RNA MGP_WSBEiJ_T0015551.1 MGP_WSBEiJ_G0013681.1 mouse_genomes_project 9 72615747 72616060 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015539.1 MGP_WSBEiJ_G0013669.1 mouse_genomes_project 9 64315424 64315812 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097122.1 MGP_WSBEiJ_G0035803.1 mouse_genomes_project 9 34547192 34547301 + n-R5s82 rRNA rRNA MGP_WSBEiJ_T0090825.1 MGP_WSBEiJ_G0033882.1 mouse_genomes_project 9 46960358 47150008 - MGP_WSBEiJ_P0090825 Zbtb16 protein_coding unknown_likely_coding MGP_WSBEiJ_T0015577.1 MGP_WSBEiJ_G0013707.1 mouse_genomes_project 9 84845443 84849394 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089981.1 MGP_WSBEiJ_G0033549.1 mouse_genomes_project 9 17762347 17766150 + MGP_WSBEiJ_P0089981 Ppan protein_coding protein_coding MGP_WSBEiJ_T0089982.1 MGP_WSBEiJ_G0033549.1 mouse_genomes_project 9 17762422 17764308 + Ppan protein_coding retained_intron MGP_WSBEiJ_T0089983.1 MGP_WSBEiJ_G0033549.1 mouse_genomes_project 9 17762439 17763649 + Ppan protein_coding retained_intron MGP_WSBEiJ_T0089984.1 MGP_WSBEiJ_G0033549.1 mouse_genomes_project 9 17762457 17766150 + Ppan protein_coding retained_intron MGP_WSBEiJ_T0089985.1 MGP_WSBEiJ_G0033549.1 mouse_genomes_project 9 17764611 17765328 + Ppan protein_coding retained_intron MGP_WSBEiJ_T0089986.1 MGP_WSBEiJ_G0033549.1 mouse_genomes_project 9 17765180 17765656 + Ppan protein_coding retained_intron MGP_WSBEiJ_T0091348.1 MGP_WSBEiJ_G0034039.1 mouse_genomes_project 9 61559542 61677800 + MGP_WSBEiJ_P0091348 Itga11 protein_coding protein_coding MGP_WSBEiJ_T0091349.1 MGP_WSBEiJ_G0034039.1 mouse_genomes_project 9 61559576 61670926 + Itga11 protein_coding retained_intron MGP_WSBEiJ_T0097132.1 MGP_WSBEiJ_G0035813.1 mouse_genomes_project 9 102982234 102982346 + Gm25669 rRNA rRNA MGP_WSBEiJ_T0097131.1 MGP_WSBEiJ_G0035812.1 mouse_genomes_project 9 102555891 102556009 + n-R5s88 rRNA rRNA MGP_WSBEiJ_T0092252.1 MGP_WSBEiJ_G0034254.1 mouse_genomes_project 9 95892726 95996131 - MGP_WSBEiJ_P0092252 Pls1 protein_coding protein_coding MGP_WSBEiJ_T0092253.1 MGP_WSBEiJ_G0034254.1 mouse_genomes_project 9 95929134 95966587 - MGP_WSBEiJ_P0092253 Pls1 protein_coding protein_coding MGP_WSBEiJ_T0092254.1 MGP_WSBEiJ_G0034254.1 mouse_genomes_project 9 95930507 95996156 - Pls1 protein_coding processed_transcript MGP_WSBEiJ_T0091217.1 MGP_WSBEiJ_G0034009.1 mouse_genomes_project 9 57209869 57226438 - MGP_WSBEiJ_P0091217 Cd276 protein_coding protein_coding MGP_WSBEiJ_T0091218.1 MGP_WSBEiJ_G0034009.1 mouse_genomes_project 9 57209871 57240619 - MGP_WSBEiJ_P0091218 Cd276 protein_coding protein_coding MGP_WSBEiJ_T0091648.1 MGP_WSBEiJ_G0034121.1 mouse_genomes_project 9 70108300 70246205 - MGP_WSBEiJ_P0091648 Lipc protein_coding protein_coding MGP_WSBEiJ_T0091649.1 MGP_WSBEiJ_G0034121.1 mouse_genomes_project 9 70108438 70134432 - MGP_WSBEiJ_P0091649 Lipc protein_coding unknown_likely_coding MGP_WSBEiJ_T0091650.1 MGP_WSBEiJ_G0034121.1 mouse_genomes_project 9 70108438 70134866 - MGP_WSBEiJ_P0091650 Lipc protein_coding unknown_likely_coding MGP_WSBEiJ_T0091651.1 MGP_WSBEiJ_G0034121.1 mouse_genomes_project 9 70108438 70142534 - MGP_WSBEiJ_P0091651 Lipc protein_coding unknown_likely_coding MGP_WSBEiJ_T0092340.1 MGP_WSBEiJ_G0034267.1 mouse_genomes_project 9 97665510 98272306 - MGP_WSBEiJ_P0092340 Clstn2 protein_coding protein_coding MGP_WSBEiJ_T0092341.1 MGP_WSBEiJ_G0034267.1 mouse_genomes_project 9 97674374 98272108 - MGP_WSBEiJ_P0092341 Clstn2 protein_coding protein_coding MGP_WSBEiJ_T0017929.1 MGP_WSBEiJ_G0015158.1 mouse_genomes_project 9 58723272 58728453 - Gm15507 processed_transcript processed_transcript MGP_WSBEiJ_T0017930.1 MGP_WSBEiJ_G0015158.1 mouse_genomes_project 9 58723474 58728453 - Gm15507 processed_transcript processed_transcript MGP_WSBEiJ_T0017931.1 MGP_WSBEiJ_G0015158.1 mouse_genomes_project 9 58726357 58728483 - Gm15507 processed_transcript processed_transcript MGP_WSBEiJ_T0091152.1 MGP_WSBEiJ_G0033994.1 mouse_genomes_project 9 56322889 56370368 + MGP_WSBEiJ_P0091152 Edc3 protein_coding protein_coding MGP_WSBEiJ_T0091153.1 MGP_WSBEiJ_G0033994.1 mouse_genomes_project 9 56322904 56369272 + MGP_WSBEiJ_P0091153 Edc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091154.1 MGP_WSBEiJ_G0033994.1 mouse_genomes_project 9 56322916 56331073 + MGP_WSBEiJ_P0091154 Edc3 protein_coding protein_coding MGP_WSBEiJ_T0091239.1 MGP_WSBEiJ_G0034014.1 mouse_genomes_project 9 57987278 58012537 + MGP_WSBEiJ_P0091239 Adpgk protein_coding protein_coding MGP_WSBEiJ_T0091240.1 MGP_WSBEiJ_G0034014.1 mouse_genomes_project 9 57987340 58012541 + MGP_WSBEiJ_P0091240 Adpgk protein_coding unknown_likely_coding MGP_WSBEiJ_T0011546.1 MGP_WSBEiJ_G0009703.1 mouse_genomes_project 9 107293976 107294236 + Gm26185 misc_RNA misc_RNA MGP_WSBEiJ_T0099841.1 MGP_WSBEiJ_G0038504.1 mouse_genomes_project 9 31282768 31282899 + Gm25439 snoRNA snoRNA MGP_WSBEiJ_T0093100.1 MGP_WSBEiJ_G0034407.1 mouse_genomes_project 9 109033939 109039036 + Rhoa protein_coding retained_intron MGP_WSBEiJ_T0093101.1 MGP_WSBEiJ_G0034407.1 mouse_genomes_project 9 109034297 109064300 + MGP_WSBEiJ_P0093101 Rhoa protein_coding protein_coding MGP_WSBEiJ_T0093102.1 MGP_WSBEiJ_G0034407.1 mouse_genomes_project 9 109034329 109059881 + MGP_WSBEiJ_P0093102 Rhoa protein_coding protein_coding MGP_WSBEiJ_T0002355.1 MGP_WSBEiJ_G0002271.1 mouse_genomes_project 9 86621903 86623062 - TEC TEC MGP_WSBEiJ_T0009122.1 MGP_WSBEiJ_G0007339.1 mouse_genomes_project 9 74302231 74345460 + Gm20649 lincRNA lincRNA MGP_WSBEiJ_T0009103.1 MGP_WSBEiJ_G0007325.1 mouse_genomes_project 9 59527807 59555278 + 1700036A12Rik lincRNA lincRNA MGP_WSBEiJ_T0009104.1 MGP_WSBEiJ_G0007325.1 mouse_genomes_project 9 59554604 59554958 + 1700036A12Rik lincRNA lincRNA MGP_WSBEiJ_T0009126.1 MGP_WSBEiJ_G0007342.1 mouse_genomes_project 9 76620883 76626153 + Gm19541 lincRNA lincRNA MGP_WSBEiJ_T0005349.1 MGP_WSBEiJ_G0004529.1 mouse_genomes_project 9 34264045 34282697 + Gm26787 antisense antisense MGP_WSBEiJ_T0009152.1 MGP_WSBEiJ_G0007363.1 mouse_genomes_project 9 93051061 93077513 - 1700034K08Rik lincRNA lincRNA MGP_WSBEiJ_T0009153.1 MGP_WSBEiJ_G0007363.1 mouse_genomes_project 9 93051061 93061557 - 1700034K08Rik lincRNA lincRNA MGP_WSBEiJ_T0009154.1 MGP_WSBEiJ_G0007363.1 mouse_genomes_project 9 93051142 93077519 - 1700034K08Rik lincRNA lincRNA MGP_WSBEiJ_T0009155.1 MGP_WSBEiJ_G0007363.1 mouse_genomes_project 9 93073587 93077510 - 1700034K08Rik lincRNA lincRNA MGP_WSBEiJ_T0090649.1 MGP_WSBEiJ_G0033833.1 mouse_genomes_project 9 42794455 42807508 + MGP_WSBEiJ_P0090649 Treh protein_coding protein_coding MGP_WSBEiJ_T0090650.1 MGP_WSBEiJ_G0033833.1 mouse_genomes_project 9 42794457 42807507 + MGP_WSBEiJ_P0090650 Treh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090651.1 MGP_WSBEiJ_G0033833.1 mouse_genomes_project 9 42794471 42807508 + MGP_WSBEiJ_P0090651 Treh protein_coding protein_coding MGP_WSBEiJ_T0090652.1 MGP_WSBEiJ_G0033833.1 mouse_genomes_project 9 42804502 42807219 + MGP_WSBEiJ_P0090652 Treh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090956.1 MGP_WSBEiJ_G0033924.1 mouse_genomes_project 9 51552221 51710482 - MGP_WSBEiJ_P0090956 Ddx10 protein_coding protein_coding MGP_WSBEiJ_T0090991.1 MGP_WSBEiJ_G0033939.1 mouse_genomes_project 9 52774455 52826005 + MGP_WSBEiJ_P0090991 Gldn protein_coding protein_coding MGP_WSBEiJ_T0090143.1 MGP_WSBEiJ_G0033615.1 mouse_genomes_project 9 22175963 22224940 - MGP_WSBEiJ_P0090143 Herpud2 protein_coding protein_coding MGP_WSBEiJ_T0015583.1 MGP_WSBEiJ_G0013713.1 mouse_genomes_project 9 87969836 87970441 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099864.1 MGP_WSBEiJ_G0038527.1 mouse_genomes_project 9 67692969 67693042 + Gm22962 snoRNA snoRNA MGP_WSBEiJ_T0091265.1 MGP_WSBEiJ_G0034023.1 mouse_genomes_project 9 58485257 58503230 - MGP_WSBEiJ_P0091265 Senp8 protein_coding protein_coding MGP_WSBEiJ_T0091266.1 MGP_WSBEiJ_G0034023.1 mouse_genomes_project 9 58485257 58503230 - MGP_WSBEiJ_P0091266 Senp8 protein_coding protein_coding MGP_WSBEiJ_T0000320.1 MGP_WSBEiJ_G0000268.1 mouse_genomes_project 9 124864828 124864895 - mt-Tw Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0090494.1 MGP_WSBEiJ_G0033773.1 mouse_genomes_project 9 37821877 37822922 - MGP_WSBEiJ_P0090494 Olfr979 protein_coding protein_coding MGP_WSBEiJ_T0089930.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17319780 17345610 - MGP_WSBEiJ_P0089930 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089931.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17319780 17329478 - MGP_WSBEiJ_P0089931 Zfp426 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089932.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17319780 17345610 - MGP_WSBEiJ_P0089932 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089933.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17319934 17345606 - MGP_WSBEiJ_P0089933 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089934.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17320771 17345606 - MGP_WSBEiJ_P0089934 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089935.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17321050 17345606 - MGP_WSBEiJ_P0089935 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089936.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17321219 17329365 - MGP_WSBEiJ_P0089936 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089937.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17322209 17324680 - Zfp426 protein_coding retained_intron MGP_WSBEiJ_T0089938.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17322355 17345595 - MGP_WSBEiJ_P0089938 Zfp426 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089939.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17322400 17343670 - MGP_WSBEiJ_P0089939 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089940.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17324322 17329462 - MGP_WSBEiJ_P0089940 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089941.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17326165 17345565 - MGP_WSBEiJ_P0089941 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0089942.1 MGP_WSBEiJ_G0033538.1 mouse_genomes_project 9 17327629 17345575 - MGP_WSBEiJ_P0089942 Zfp426 protein_coding protein_coding MGP_WSBEiJ_T0099898.1 MGP_WSBEiJ_G0038561.1 mouse_genomes_project 9 124929027 124929160 + Gm23323 snoRNA snoRNA MGP_WSBEiJ_T0015643.1 MGP_WSBEiJ_G0013773.1 mouse_genomes_project 9 121924301 121924891 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009131.1 MGP_WSBEiJ_G0007347.1 mouse_genomes_project 9 80958601 80985901 + Gm26713 lincRNA lincRNA MGP_WSBEiJ_T0092692.1 MGP_WSBEiJ_G0034342.1 mouse_genomes_project 9 107005426 107014436 + MGP_WSBEiJ_P0092692 Dusp7 protein_coding protein_coding MGP_WSBEiJ_T0092693.1 MGP_WSBEiJ_G0034342.1 mouse_genomes_project 9 107006403 107007660 + Dusp7 protein_coding processed_transcript MGP_WSBEiJ_T0092694.1 MGP_WSBEiJ_G0034342.1 mouse_genomes_project 9 107007528 107012777 + MGP_WSBEiJ_P0092694 Dusp7 protein_coding protein_coding MGP_WSBEiJ_T0092890.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108282219 108290032 - MGP_WSBEiJ_P0092890 Sema3b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092891.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108282762 108293741 - MGP_WSBEiJ_P0092891 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092892.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108282898 108293711 - MGP_WSBEiJ_P0092892 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092893.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108282899 108291169 - MGP_WSBEiJ_P0092893 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092894.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108282900 108293705 - MGP_WSBEiJ_P0092894 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092895.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108282900 108289913 - MGP_WSBEiJ_P0092895 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092896.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108284353 108285857 - Sema3b protein_coding retained_intron MGP_WSBEiJ_T0092897.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108286165 108286717 - Sema3b protein_coding retained_intron MGP_WSBEiJ_T0092898.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108287704 108289780 - MGP_WSBEiJ_P0092898 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092899.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108287859 108291429 - MGP_WSBEiJ_P0092899 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092900.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108287891 108291196 - MGP_WSBEiJ_P0092900 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092901.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108288709 108291194 - MGP_WSBEiJ_P0092901 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092902.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108289587 108293732 - MGP_WSBEiJ_P0092902 Sema3b protein_coding protein_coding MGP_WSBEiJ_T0092903.1 MGP_WSBEiJ_G0034379.1 mouse_genomes_project 9 108289631 108291698 - Sema3b protein_coding processed_transcript MGP_WSBEiJ_T0092833.1 MGP_WSBEiJ_G0034369.1 mouse_genomes_project 9 108222732 108225591 - MGP_WSBEiJ_P0092833 Cyb561d2 protein_coding protein_coding MGP_WSBEiJ_T0092834.1 MGP_WSBEiJ_G0034369.1 mouse_genomes_project 9 108223300 108225919 - MGP_WSBEiJ_P0092834 Cyb561d2 protein_coding protein_coding MGP_WSBEiJ_T0092835.1 MGP_WSBEiJ_G0034369.1 mouse_genomes_project 9 108223306 108225250 - MGP_WSBEiJ_P0092835 Cyb561d2 protein_coding protein_coding MGP_WSBEiJ_T0092836.1 MGP_WSBEiJ_G0034369.1 mouse_genomes_project 9 108223602 108225850 - Cyb561d2 protein_coding processed_transcript MGP_WSBEiJ_T0092837.1 MGP_WSBEiJ_G0034369.1 mouse_genomes_project 9 108223767 108225853 - MGP_WSBEiJ_P0092837 Cyb561d2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093928.1 MGP_WSBEiJ_G0034590.1 mouse_genomes_project 9 125457261 125556077 + MGP_WSBEiJ_P0093928 Ccr9 protein_coding protein_coding MGP_WSBEiJ_T0093937.1 MGP_WSBEiJ_G0034590.1 mouse_genomes_project 9 125539453 125556075 + MGP_WSBEiJ_P0093937 Ccr9 protein_coding protein_coding MGP_WSBEiJ_T0093938.1 MGP_WSBEiJ_G0034590.1 mouse_genomes_project 9 125539469 125555637 + MGP_WSBEiJ_P0093938 Ccr9 protein_coding protein_coding MGP_WSBEiJ_T0093939.1 MGP_WSBEiJ_G0034590.1 mouse_genomes_project 9 125539471 125556083 + MGP_WSBEiJ_P0093939 Ccr9 protein_coding protein_coding MGP_WSBEiJ_T0093940.1 MGP_WSBEiJ_G0034590.1 mouse_genomes_project 9 125548647 125557570 + MGP_WSBEiJ_P0093940 Ccr9 protein_coding protein_coding MGP_WSBEiJ_T0093872.1 MGP_WSBEiJ_G0034568.1 mouse_genomes_project 9 123894853 124022987 - MGP_WSBEiJ_P0093872 Ano10 protein_coding protein_coding MGP_WSBEiJ_T0093028.1 MGP_WSBEiJ_G0034395.1 mouse_genomes_project 9 108699004 108751469 + Gm20662 protein_coding retained_intron MGP_WSBEiJ_T0093033.1 MGP_WSBEiJ_G0034395.1 mouse_genomes_project 9 108700644 108736360 + MGP_WSBEiJ_P0093033 Gm20662 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093034.1 MGP_WSBEiJ_G0034395.1 mouse_genomes_project 9 108700682 108736352 + MGP_WSBEiJ_P0093034 Gm20662 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090141.1 MGP_WSBEiJ_G0033614.1 mouse_genomes_project 9 21767516 21822381 - MGP_WSBEiJ_P0090141 Tbx20 protein_coding protein_coding MGP_WSBEiJ_T0090142.1 MGP_WSBEiJ_G0033614.1 mouse_genomes_project 9 21788385 21822381 - MGP_WSBEiJ_P0090142 Tbx20 protein_coding protein_coding MGP_WSBEiJ_T0090374.1 MGP_WSBEiJ_G0033683.1 mouse_genomes_project 9 34945824 34957925 + Robo4 protein_coding retained_intron MGP_WSBEiJ_T0090375.1 MGP_WSBEiJ_G0033683.1 mouse_genomes_project 9 34945824 34957929 + MGP_WSBEiJ_P0090375 Robo4 protein_coding protein_coding MGP_WSBEiJ_T0090376.1 MGP_WSBEiJ_G0033683.1 mouse_genomes_project 9 34945960 34957927 + MGP_WSBEiJ_P0090376 Robo4 protein_coding protein_coding MGP_WSBEiJ_T0090377.1 MGP_WSBEiJ_G0033683.1 mouse_genomes_project 9 34945973 34957928 + MGP_WSBEiJ_P0090377 Robo4 protein_coding protein_coding MGP_WSBEiJ_T0002380.1 MGP_WSBEiJ_G0002296.1 mouse_genomes_project 9 99605240 99608109 + TEC TEC MGP_WSBEiJ_T0005470.1 MGP_WSBEiJ_G0004612.1 mouse_genomes_project 9 111635963 111641528 - Gm42762 antisense antisense MGP_WSBEiJ_T0011535.1 MGP_WSBEiJ_G0009692.1 mouse_genomes_project 9 40504739 40504798 - Gm24420 misc_RNA misc_RNA MGP_WSBEiJ_T0005448.1 MGP_WSBEiJ_G0004595.1 mouse_genomes_project 9 107298462 107301094 + Gm28111 antisense antisense MGP_WSBEiJ_T0089914.1 MGP_WSBEiJ_G0033528.1 mouse_genomes_project 9 16786472 16791754 + MGP_WSBEiJ_P0089914 Olfr77 protein_coding protein_coding MGP_WSBEiJ_T0015605.1 MGP_WSBEiJ_G0013735.1 mouse_genomes_project 9 95809396 95809985 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090302.1 MGP_WSBEiJ_G0033658.1 mouse_genomes_project 9 32971515 33104711 + MGP_WSBEiJ_P0090302 Pate2 protein_coding protein_coding MGP_WSBEiJ_T0090303.1 MGP_WSBEiJ_G0033658.1 mouse_genomes_project 9 32975220 33047961 + Pate2 protein_coding processed_transcript MGP_WSBEiJ_T0090306.1 MGP_WSBEiJ_G0033658.1 mouse_genomes_project 9 33068908 33072169 + MGP_WSBEiJ_P0090306 Pate2 protein_coding protein_coding MGP_WSBEiJ_T0090307.1 MGP_WSBEiJ_G0033658.1 mouse_genomes_project 9 33068920 33070687 + Pate2 protein_coding retained_intron MGP_WSBEiJ_T0017895.1 MGP_WSBEiJ_G0015148.1 mouse_genomes_project 9 4845799 4857071 + Gm20416 processed_transcript processed_transcript MGP_WSBEiJ_T0009161.1 MGP_WSBEiJ_G0007368.1 mouse_genomes_project 9 97279701 97285736 + Gm26767 lincRNA lincRNA MGP_WSBEiJ_T0090051.1 MGP_WSBEiJ_G0033575.1 mouse_genomes_project 9 18467825 18515470 + Carm1 protein_coding retained_intron MGP_WSBEiJ_T0090052.1 MGP_WSBEiJ_G0033575.1 mouse_genomes_project 9 18467825 18515470 + MGP_WSBEiJ_P0090052 Carm1 protein_coding protein_coding MGP_WSBEiJ_T0090053.1 MGP_WSBEiJ_G0033575.1 mouse_genomes_project 9 18467900 18514191 + MGP_WSBEiJ_P0090053 Carm1 protein_coding protein_coding MGP_WSBEiJ_T0090054.1 MGP_WSBEiJ_G0033575.1 mouse_genomes_project 9 18467925 18515470 + MGP_WSBEiJ_P0090054 Carm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090055.1 MGP_WSBEiJ_G0033575.1 mouse_genomes_project 9 18468050 18503817 + Carm1 protein_coding processed_transcript MGP_WSBEiJ_T0090056.1 MGP_WSBEiJ_G0033575.1 mouse_genomes_project 9 18499447 18504689 + Carm1 protein_coding processed_transcript MGP_WSBEiJ_T0090057.1 MGP_WSBEiJ_G0033575.1 mouse_genomes_project 9 18513220 18514203 + Carm1 protein_coding processed_transcript MGP_WSBEiJ_T0090058.1 MGP_WSBEiJ_G0033575.1 mouse_genomes_project 9 18513405 18514132 + Carm1 protein_coding processed_transcript MGP_WSBEiJ_T0092462.1 MGP_WSBEiJ_G0034298.1 mouse_genomes_project 9 101857390 101858221 - MGP_WSBEiJ_P0092462 Gm5145 protein_coding protein_coding MGP_WSBEiJ_T0005471.1 MGP_WSBEiJ_G0004613.1 mouse_genomes_project 9 111984499 111985813 + 1700061E17Rik antisense antisense MGP_WSBEiJ_T0089807.1 MGP_WSBEiJ_G0033476.1 mouse_genomes_project 9 11258292 11268256 + MGP_WSBEiJ_P0089807 Cwc15 protein_coding protein_coding MGP_WSBEiJ_T0090483.1 MGP_WSBEiJ_G0033762.1 mouse_genomes_project 9 37532315 37533702 + MGP_WSBEiJ_P0090483 Olfr150 protein_coding protein_coding MGP_WSBEiJ_T0002410.1 MGP_WSBEiJ_G0002326.1 mouse_genomes_project 9 108316695 108318438 - TEC TEC MGP_WSBEiJ_T0011534.1 MGP_WSBEiJ_G0009691.1 mouse_genomes_project 9 18613004 18613188 + Gm27373 misc_RNA misc_RNA MGP_WSBEiJ_T0002429.1 MGP_WSBEiJ_G0002345.1 mouse_genomes_project 9 119893653 119894491 - TEC TEC MGP_WSBEiJ_T0091892.1 MGP_WSBEiJ_G0034171.1 mouse_genomes_project 9 77537897 77609456 + MGP_WSBEiJ_P0091892 Elovl5 protein_coding protein_coding MGP_WSBEiJ_T0091893.1 MGP_WSBEiJ_G0034171.1 mouse_genomes_project 9 77537967 77583362 + Elovl5 protein_coding retained_intron MGP_WSBEiJ_T0091894.1 MGP_WSBEiJ_G0034171.1 mouse_genomes_project 9 77543707 77604808 + MGP_WSBEiJ_P0091894 Elovl5 protein_coding protein_coding MGP_WSBEiJ_T0091895.1 MGP_WSBEiJ_G0034171.1 mouse_genomes_project 9 77562984 77586667 + MGP_WSBEiJ_P0091895 Elovl5 protein_coding protein_coding MGP_WSBEiJ_T0090263.1 MGP_WSBEiJ_G0033650.1 mouse_genomes_project 9 32593627 32606734 + Srpr protein_coding processed_transcript MGP_WSBEiJ_T0090276.1 MGP_WSBEiJ_G0033650.1 mouse_genomes_project 9 32604348 32611791 + MGP_WSBEiJ_P0090276 Srpr protein_coding protein_coding MGP_WSBEiJ_T0090277.1 MGP_WSBEiJ_G0033650.1 mouse_genomes_project 9 32605091 32606049 + Srpr protein_coding retained_intron MGP_WSBEiJ_T0090278.1 MGP_WSBEiJ_G0033650.1 mouse_genomes_project 9 32608096 32643093 + MGP_WSBEiJ_P0090278 Srpr protein_coding protein_coding MGP_WSBEiJ_T0091466.1 MGP_WSBEiJ_G0034080.1 mouse_genomes_project 9 64631284 64641006 + MGP_WSBEiJ_P0091466 Pif1 protein_coding protein_coding MGP_WSBEiJ_T0091467.1 MGP_WSBEiJ_G0034080.1 mouse_genomes_project 9 64631306 64631962 + MGP_WSBEiJ_P0091467 Pif1 protein_coding protein_coding MGP_WSBEiJ_T0091468.1 MGP_WSBEiJ_G0034080.1 mouse_genomes_project 9 64631317 64641004 + MGP_WSBEiJ_P0091468 Pif1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091469.1 MGP_WSBEiJ_G0034080.1 mouse_genomes_project 9 64631329 64634617 + Pif1 protein_coding retained_intron MGP_WSBEiJ_T0091470.1 MGP_WSBEiJ_G0034080.1 mouse_genomes_project 9 64631329 64641009 + MGP_WSBEiJ_P0091470 Pif1 protein_coding protein_coding MGP_WSBEiJ_T0091471.1 MGP_WSBEiJ_G0034080.1 mouse_genomes_project 9 64631337 64641009 + Pif1 protein_coding retained_intron MGP_WSBEiJ_T0091472.1 MGP_WSBEiJ_G0034080.1 mouse_genomes_project 9 64631345 64641009 + MGP_WSBEiJ_P0091472 Pif1 protein_coding protein_coding MGP_WSBEiJ_T0091473.1 MGP_WSBEiJ_G0034080.1 mouse_genomes_project 9 64631350 64632405 + MGP_WSBEiJ_P0091473 Pif1 protein_coding protein_coding MGP_WSBEiJ_T0015630.1 MGP_WSBEiJ_G0013760.1 mouse_genomes_project 9 106125822 106126225 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092832.1 MGP_WSBEiJ_G0034368.1 mouse_genomes_project 9 108217665 108222399 + MGP_WSBEiJ_P0092832 Tmem115 protein_coding protein_coding MGP_WSBEiJ_T0093858.1 MGP_WSBEiJ_G0034562.1 mouse_genomes_project 9 123608766 123623121 + MGP_WSBEiJ_P0093858 Ackr2 protein_coding protein_coding MGP_WSBEiJ_T0091850.1 MGP_WSBEiJ_G0034161.1 mouse_genomes_project 9 75284031 75424714 + MGP_WSBEiJ_P0091850 Bmp5 protein_coding protein_coding MGP_WSBEiJ_T0091851.1 MGP_WSBEiJ_G0034161.1 mouse_genomes_project 9 75342614 75358577 + Bmp5 protein_coding processed_transcript MGP_WSBEiJ_T0005390.1 MGP_WSBEiJ_G0004555.1 mouse_genomes_project 9 68705968 68708487 - Gm16144 antisense antisense MGP_WSBEiJ_T0002317.1 MGP_WSBEiJ_G0002234.1 mouse_genomes_project 9 57240285 57241316 + TEC TEC MGP_WSBEiJ_T0093120.1 MGP_WSBEiJ_G0034412.1 mouse_genomes_project 9 109177708 109189682 + MGP_WSBEiJ_P0093120 BC048562 protein_coding protein_coding MGP_WSBEiJ_T0093121.1 MGP_WSBEiJ_G0034412.1 mouse_genomes_project 9 109177720 109189482 + BC048562 protein_coding processed_transcript MGP_WSBEiJ_T0002376.1 MGP_WSBEiJ_G0002292.1 mouse_genomes_project 9 98167987 98169537 - TEC TEC MGP_WSBEiJ_T0090737.1 MGP_WSBEiJ_G0033858.1 mouse_genomes_project 9 43953761 44017498 - MGP_WSBEiJ_P0090737 Cep164 protein_coding protein_coding MGP_WSBEiJ_T0090738.1 MGP_WSBEiJ_G0033858.1 mouse_genomes_project 9 43953763 44017445 - MGP_WSBEiJ_P0090738 Cep164 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090739.1 MGP_WSBEiJ_G0033858.1 mouse_genomes_project 9 43957559 43959343 - Cep164 protein_coding retained_intron MGP_WSBEiJ_T0090740.1 MGP_WSBEiJ_G0033858.1 mouse_genomes_project 9 43965010 43989290 - MGP_WSBEiJ_P0090740 Cep164 protein_coding protein_coding MGP_WSBEiJ_T0093215.1 MGP_WSBEiJ_G0034423.1 mouse_genomes_project 9 109324715 109345172 - MGP_WSBEiJ_P0093215 P4htm protein_coding protein_coding MGP_WSBEiJ_T0093216.1 MGP_WSBEiJ_G0034423.1 mouse_genomes_project 9 109325032 109325411 - P4htm protein_coding processed_transcript MGP_WSBEiJ_T0093217.1 MGP_WSBEiJ_G0034423.1 mouse_genomes_project 9 109326442 109328803 - P4htm protein_coding retained_intron MGP_WSBEiJ_T0093218.1 MGP_WSBEiJ_G0034423.1 mouse_genomes_project 9 109327417 109345081 - P4htm protein_coding retained_intron MGP_WSBEiJ_T0093219.1 MGP_WSBEiJ_G0034423.1 mouse_genomes_project 9 109328857 109345085 - MGP_WSBEiJ_P0093219 P4htm protein_coding protein_coding MGP_WSBEiJ_T0093220.1 MGP_WSBEiJ_G0034423.1 mouse_genomes_project 9 109328857 109344851 - MGP_WSBEiJ_P0093220 P4htm protein_coding protein_coding MGP_WSBEiJ_T0009065.1 MGP_WSBEiJ_G0007292.1 mouse_genomes_project 9 22246718 22247165 + Gm29375 lincRNA lincRNA MGP_WSBEiJ_T0009096.1 MGP_WSBEiJ_G0007318.1 mouse_genomes_project 9 55640901 55641699 - 2700012I20Rik lincRNA lincRNA MGP_WSBEiJ_T0093929.1 MGP_WSBEiJ_G0034591.1 mouse_genomes_project 9 125474989 125498340 - MGP_WSBEiJ_P0093929 Lztfl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093930.1 MGP_WSBEiJ_G0034591.1 mouse_genomes_project 9 125474999 125498359 - Lztfl1 protein_coding processed_transcript MGP_WSBEiJ_T0093931.1 MGP_WSBEiJ_G0034591.1 mouse_genomes_project 9 125480910 125492629 - MGP_WSBEiJ_P0093931 Lztfl1 protein_coding protein_coding MGP_WSBEiJ_T0093932.1 MGP_WSBEiJ_G0034591.1 mouse_genomes_project 9 125486201 125488210 - Lztfl1 protein_coding retained_intron MGP_WSBEiJ_T0093933.1 MGP_WSBEiJ_G0034591.1 mouse_genomes_project 9 125487949 125498287 - Lztfl1 protein_coding processed_transcript MGP_WSBEiJ_T0093934.1 MGP_WSBEiJ_G0034591.1 mouse_genomes_project 9 125492482 125498281 - Lztfl1 protein_coding processed_transcript MGP_WSBEiJ_T0093935.1 MGP_WSBEiJ_G0034591.1 mouse_genomes_project 9 125492486 125498283 - Lztfl1 protein_coding processed_transcript MGP_WSBEiJ_T0093936.1 MGP_WSBEiJ_G0034591.1 mouse_genomes_project 9 125495623 125498316 - Lztfl1 protein_coding retained_intron MGP_WSBEiJ_T0015518.1 MGP_WSBEiJ_G0013648.1 mouse_genomes_project 9 32975459 32975748 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015530.1 MGP_WSBEiJ_G0013660.1 mouse_genomes_project 9 47377861 47378554 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090420.1 MGP_WSBEiJ_G0033711.1 mouse_genomes_project 9 35940363 35941431 + MGP_WSBEiJ_P0090420 Olfr25 protein_coding protein_coding MGP_WSBEiJ_T0093917.1 MGP_WSBEiJ_G0034586.1 mouse_genomes_project 9 125252436 125295164 + MGP_WSBEiJ_P0093917 Limd1 protein_coding protein_coding MGP_WSBEiJ_T0099859.1 MGP_WSBEiJ_G0038522.1 mouse_genomes_project 9 63133123 63133222 + Gm23136 snoRNA snoRNA MGP_WSBEiJ_T0089999.1 MGP_WSBEiJ_G0033561.1 mouse_genomes_project 9 18026909 18038275 - MGP_WSBEiJ_P0089999 Cdc37 protein_coding protein_coding MGP_WSBEiJ_T0089988.1 MGP_WSBEiJ_G0033551.1 mouse_genomes_project 9 17782260 17828760 - MGP_WSBEiJ_P0089988 Dnmt1 protein_coding protein_coding MGP_WSBEiJ_T0093886.1 MGP_WSBEiJ_G0034574.1 mouse_genomes_project 9 124632523 124644262 + MGP_WSBEiJ_P0093886 Zkscan7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092673.1 MGP_WSBEiJ_G0034338.1 mouse_genomes_project 9 106827647 106840118 + MGP_WSBEiJ_P0092673 Twf2 protein_coding protein_coding MGP_WSBEiJ_T0092674.1 MGP_WSBEiJ_G0034338.1 mouse_genomes_project 9 106827676 106836972 + MGP_WSBEiJ_P0092674 Twf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092675.1 MGP_WSBEiJ_G0034338.1 mouse_genomes_project 9 106827684 106837551 + MGP_WSBEiJ_P0092675 Twf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092676.1 MGP_WSBEiJ_G0034338.1 mouse_genomes_project 9 106831443 106840116 + MGP_WSBEiJ_P0092676 Twf2 protein_coding protein_coding MGP_WSBEiJ_T0092677.1 MGP_WSBEiJ_G0034338.1 mouse_genomes_project 9 106838956 106839750 + Twf2 protein_coding retained_intron MGP_WSBEiJ_T0009147.1 MGP_WSBEiJ_G0007359.1 mouse_genomes_project 9 91431671 91608776 + Gm29478 lincRNA lincRNA MGP_WSBEiJ_T0090425.1 MGP_WSBEiJ_G0033716.1 mouse_genomes_project 9 36051399 36052335 + MGP_WSBEiJ_P0090425 Olfr901 protein_coding protein_coding MGP_WSBEiJ_T0093954.1 MGP_WSBEiJ_G0034599.1 mouse_genomes_project 9 125877738 125883334 + MGP_WSBEiJ_P0093954 Ccr5 protein_coding protein_coding MGP_WSBEiJ_T0093955.1 MGP_WSBEiJ_G0034599.1 mouse_genomes_project 9 125877768 125881414 + Ccr5 protein_coding processed_transcript MGP_WSBEiJ_T0093956.1 MGP_WSBEiJ_G0034599.1 mouse_genomes_project 9 125877768 125888058 + MGP_WSBEiJ_P0093956 Ccr5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093957.1 MGP_WSBEiJ_G0034599.1 mouse_genomes_project 9 125877776 125880878 + MGP_WSBEiJ_P0093957 Ccr5 protein_coding protein_coding MGP_WSBEiJ_T0093958.1 MGP_WSBEiJ_G0034599.1 mouse_genomes_project 9 125882834 125886412 + Ccr5 protein_coding processed_transcript MGP_WSBEiJ_T0093959.1 MGP_WSBEiJ_G0034599.1 mouse_genomes_project 9 125884909 125907963 + Ccr5 protein_coding processed_transcript MGP_WSBEiJ_T0091003.1 MGP_WSBEiJ_G0033942.1 mouse_genomes_project 9 53034140 53053733 - MGP_WSBEiJ_P0091003 Cib2 protein_coding protein_coding MGP_WSBEiJ_T0015618.1 MGP_WSBEiJ_G0013748.1 mouse_genomes_project 9 101451691 101452042 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093647.1 MGP_WSBEiJ_G0034495.1 mouse_genomes_project 9 115664555 115743212 + MGP_WSBEiJ_P0093647 Glb1 protein_coding protein_coding MGP_WSBEiJ_T0093885.1 MGP_WSBEiJ_G0034573.1 mouse_genomes_project 9 124592442 124604754 - MGP_WSBEiJ_P0093885 Zfp445 protein_coding protein_coding MGP_WSBEiJ_T0089918.1 MGP_WSBEiJ_G0033532.1 mouse_genomes_project 9 17095028 17114483 + MGP_WSBEiJ_P0089918 Olfr872 protein_coding protein_coding MGP_WSBEiJ_T0092196.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91387185 91404233 + MGP_WSBEiJ_P0092196 Zic4 protein_coding protein_coding MGP_WSBEiJ_T0092197.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91393713 91394479 + Zic4 protein_coding processed_transcript MGP_WSBEiJ_T0092198.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91394157 91404575 + MGP_WSBEiJ_P0092198 Zic4 protein_coding protein_coding MGP_WSBEiJ_T0092199.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91394239 91406301 + Zic4 protein_coding retained_intron MGP_WSBEiJ_T0092200.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91394315 91413895 + MGP_WSBEiJ_P0092200 Zic4 protein_coding protein_coding MGP_WSBEiJ_T0092201.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91394831 91404858 + Zic4 protein_coding retained_intron MGP_WSBEiJ_T0092202.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91396337 91404507 + MGP_WSBEiJ_P0092202 Zic4 protein_coding protein_coding MGP_WSBEiJ_T0092203.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91396546 91413060 + MGP_WSBEiJ_P0092203 Zic4 protein_coding protein_coding MGP_WSBEiJ_T0092204.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91396683 91399256 + Zic4 protein_coding retained_intron MGP_WSBEiJ_T0092205.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91403514 91410482 + Zic4 protein_coding retained_intron MGP_WSBEiJ_T0092206.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91403959 91415448 + MGP_WSBEiJ_P0092206 Zic4 protein_coding protein_coding MGP_WSBEiJ_T0092207.1 MGP_WSBEiJ_G0034240.1 mouse_genomes_project 9 91408493 91414146 + Zic4 protein_coding processed_transcript MGP_WSBEiJ_T0005410.1 MGP_WSBEiJ_G0004569.1 mouse_genomes_project 9 83239373 83270995 + Gm2087 antisense antisense MGP_WSBEiJ_T0015581.1 MGP_WSBEiJ_G0013711.1 mouse_genomes_project 9 87345332 87345810 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092991.1 MGP_WSBEiJ_G0034390.1 mouse_genomes_project 9 108652948 108674354 + Traip protein_coding retained_intron MGP_WSBEiJ_T0092992.1 MGP_WSBEiJ_G0034390.1 mouse_genomes_project 9 108653768 108675099 + MGP_WSBEiJ_P0092992 Traip protein_coding protein_coding MGP_WSBEiJ_T0092993.1 MGP_WSBEiJ_G0034390.1 mouse_genomes_project 9 108653779 108661309 + Traip protein_coding processed_transcript MGP_WSBEiJ_T0092994.1 MGP_WSBEiJ_G0034390.1 mouse_genomes_project 9 108653800 108663867 + MGP_WSBEiJ_P0092994 Traip protein_coding protein_coding MGP_WSBEiJ_T0092995.1 MGP_WSBEiJ_G0034390.1 mouse_genomes_project 9 108663212 108664483 + Traip protein_coding processed_transcript MGP_WSBEiJ_T0092996.1 MGP_WSBEiJ_G0034390.1 mouse_genomes_project 9 108664993 108671465 + Traip protein_coding retained_intron MGP_WSBEiJ_T0092997.1 MGP_WSBEiJ_G0034390.1 mouse_genomes_project 9 108665054 108671562 + Traip protein_coding retained_intron MGP_WSBEiJ_T0091275.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58707589 58726421 - Nr2e3 protein_coding retained_intron MGP_WSBEiJ_T0091276.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58707589 58714857 - Nr2e3 protein_coding retained_intron MGP_WSBEiJ_T0091277.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58707589 58714940 - MGP_WSBEiJ_P0091277 Nr2e3 protein_coding protein_coding MGP_WSBEiJ_T0091278.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58707805 58714933 - Nr2e3 protein_coding retained_intron MGP_WSBEiJ_T0091279.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58707946 58714897 - Nr2e3 protein_coding retained_intron MGP_WSBEiJ_T0091280.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58711572 58713614 - Nr2e3 protein_coding retained_intron MGP_WSBEiJ_T0091281.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58712193 58714217 - Nr2e3 protein_coding processed_transcript MGP_WSBEiJ_T0091282.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58713420 58726417 - Nr2e3 protein_coding processed_transcript MGP_WSBEiJ_T0091283.1 MGP_WSBEiJ_G0034025.1 mouse_genomes_project 9 58713540 58714897 - Nr2e3 protein_coding retained_intron MGP_WSBEiJ_T0090011.1 MGP_WSBEiJ_G0033564.1 mouse_genomes_project 9 18140317 18145518 - MGP_WSBEiJ_P0090011 S1pr5 protein_coding protein_coding MGP_WSBEiJ_T0005372.1 MGP_WSBEiJ_G0004544.1 mouse_genomes_project 9 54783162 54793516 + Peak1os antisense antisense MGP_WSBEiJ_T0091753.1 MGP_WSBEiJ_G0034134.1 mouse_genomes_project 9 72220765 72339366 + MGP_WSBEiJ_P0091753 Prtg protein_coding protein_coding MGP_WSBEiJ_T0091754.1 MGP_WSBEiJ_G0034134.1 mouse_genomes_project 9 72332697 72334376 + Prtg protein_coding retained_intron MGP_WSBEiJ_T0015515.1 MGP_WSBEiJ_G0013645.1 mouse_genomes_project 9 31296996 31297228 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089681.1 MGP_WSBEiJ_G0033436.1 mouse_genomes_project 9 1135258 1138585 + MGP_WSBEiJ_P0089681 Msantd4 protein_coding protein_coding MGP_WSBEiJ_T0092009.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82916922 82917800 - Hmgn3 protein_coding processed_transcript MGP_WSBEiJ_T0092010.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82916922 82957226 - MGP_WSBEiJ_P0092010 Hmgn3 protein_coding protein_coding MGP_WSBEiJ_T0092011.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82916922 82957306 - MGP_WSBEiJ_P0092011 Hmgn3 protein_coding protein_coding MGP_WSBEiJ_T0092012.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82916922 82957091 - MGP_WSBEiJ_P0092012 Hmgn3 protein_coding protein_coding MGP_WSBEiJ_T0092013.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82916922 82957151 - MGP_WSBEiJ_P0092013 Hmgn3 protein_coding protein_coding MGP_WSBEiJ_T0092014.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82916942 82918106 - Hmgn3 protein_coding retained_intron MGP_WSBEiJ_T0092015.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82917155 82919544 - Hmgn3 protein_coding retained_intron MGP_WSBEiJ_T0092016.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82917352 82957138 - MGP_WSBEiJ_P0092016 Hmgn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092017.1 MGP_WSBEiJ_G0034201.1 mouse_genomes_project 9 82917694 82918068 - Hmgn3 protein_coding retained_intron MGP_WSBEiJ_T0009130.1 MGP_WSBEiJ_G0007346.1 mouse_genomes_project 9 79890164 79893236 - Gm17477 lincRNA lincRNA MGP_WSBEiJ_T0091509.1 MGP_WSBEiJ_G0034087.1 mouse_genomes_project 9 65131124 65138427 + MGP_WSBEiJ_P0091509 Ppib protein_coding protein_coding MGP_WSBEiJ_T0005382.1 MGP_WSBEiJ_G0004550.1 mouse_genomes_project 9 65507295 65510191 - Gm28379 antisense antisense MGP_WSBEiJ_T0005383.1 MGP_WSBEiJ_G0004550.1 mouse_genomes_project 9 65507852 65539655 - Gm28379 antisense antisense MGP_WSBEiJ_T0010875.1 MGP_WSBEiJ_G0009032.1 mouse_genomes_project 9 43422300 43422365 - Mir7086 miRNA miRNA MGP_WSBEiJ_T0009077.1 MGP_WSBEiJ_G0007303.1 mouse_genomes_project 9 33478182 33478716 + lincRNA lincRNA MGP_WSBEiJ_T0098598.1 MGP_WSBEiJ_G0037261.1 mouse_genomes_project 9 45790847 45790954 - Gm22286 snRNA snRNA MGP_WSBEiJ_T0015566.1 MGP_WSBEiJ_G0013696.1 mouse_genomes_project 9 77146149 77147350 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090454.1 MGP_WSBEiJ_G0033739.1 mouse_genomes_project 9 36632097 36633282 - MGP_WSBEiJ_P0090454 Olfr935 protein_coding protein_coding MGP_WSBEiJ_T0002340.1 MGP_WSBEiJ_G0002257.1 mouse_genomes_project 9 72569193 72571426 + TEC TEC MGP_WSBEiJ_T0005401.1 MGP_WSBEiJ_G0004564.1 mouse_genomes_project 9 78336623 78337380 - 4921509A06Rik antisense antisense MGP_WSBEiJ_T0005454.1 MGP_WSBEiJ_G0004599.1 mouse_genomes_project 9 108121653 108122750 - Gm17118 antisense antisense MGP_WSBEiJ_T0091267.1 MGP_WSBEiJ_G0034024.1 mouse_genomes_project 9 58503476 58693936 + MGP_WSBEiJ_P0091267 Myo9a protein_coding protein_coding MGP_WSBEiJ_T0091268.1 MGP_WSBEiJ_G0034024.1 mouse_genomes_project 9 58503476 58693936 + MGP_WSBEiJ_P0091268 Myo9a protein_coding protein_coding MGP_WSBEiJ_T0091269.1 MGP_WSBEiJ_G0034024.1 mouse_genomes_project 9 58503476 58693936 + MGP_WSBEiJ_P0091269 Myo9a protein_coding protein_coding MGP_WSBEiJ_T0091270.1 MGP_WSBEiJ_G0034024.1 mouse_genomes_project 9 58629977 58645007 + Myo9a protein_coding processed_transcript MGP_WSBEiJ_T0091271.1 MGP_WSBEiJ_G0034024.1 mouse_genomes_project 9 58658236 58669085 + Myo9a protein_coding retained_intron MGP_WSBEiJ_T0091272.1 MGP_WSBEiJ_G0034024.1 mouse_genomes_project 9 58668657 58674016 + Myo9a protein_coding retained_intron MGP_WSBEiJ_T0091273.1 MGP_WSBEiJ_G0034024.1 mouse_genomes_project 9 58669910 58675939 + Myo9a protein_coding retained_intron MGP_WSBEiJ_T0091274.1 MGP_WSBEiJ_G0034024.1 mouse_genomes_project 9 58673263 58674306 + Myo9a protein_coding retained_intron MGP_WSBEiJ_T0002381.1 MGP_WSBEiJ_G0002297.1 mouse_genomes_project 9 99620152 99620843 + TEC TEC MGP_WSBEiJ_T0092243.1 MGP_WSBEiJ_G0034252.1 mouse_genomes_project 9 95770083 95834417 + MGP_WSBEiJ_P0092243 Pcolce2 protein_coding protein_coding MGP_WSBEiJ_T0092244.1 MGP_WSBEiJ_G0034252.1 mouse_genomes_project 9 95815851 95831007 + Pcolce2 protein_coding processed_transcript MGP_WSBEiJ_T0090851.1 MGP_WSBEiJ_G0033895.1 mouse_genomes_project 9 48895111 48902116 - MGP_WSBEiJ_P0090851 Pts protein_coding protein_coding MGP_WSBEiJ_T0090539.1 MGP_WSBEiJ_G0033792.1 mouse_genomes_project 9 38918342 39069105 - MGP_WSBEiJ_P0090539 Ubash3b protein_coding protein_coding MGP_WSBEiJ_T0090540.1 MGP_WSBEiJ_G0033792.1 mouse_genomes_project 9 38958303 39073238 - Ubash3b protein_coding processed_transcript MGP_WSBEiJ_T0090541.1 MGP_WSBEiJ_G0033792.1 mouse_genomes_project 9 38958331 39069181 - MGP_WSBEiJ_P0090541 Ubash3b protein_coding protein_coding MGP_WSBEiJ_T0090542.1 MGP_WSBEiJ_G0033792.1 mouse_genomes_project 9 38958389 39073406 - MGP_WSBEiJ_P0090542 Ubash3b protein_coding protein_coding MGP_WSBEiJ_T0090543.1 MGP_WSBEiJ_G0033792.1 mouse_genomes_project 9 39071511 39073415 - Ubash3b protein_coding processed_transcript MGP_WSBEiJ_T0093873.1 MGP_WSBEiJ_G0034569.1 mouse_genomes_project 9 124080717 124107682 + MGP_WSBEiJ_P0093873 Abhd5 protein_coding protein_coding MGP_WSBEiJ_T0093874.1 MGP_WSBEiJ_G0034569.1 mouse_genomes_project 9 124080839 124107682 + MGP_WSBEiJ_P0093874 Abhd5 protein_coding protein_coding MGP_WSBEiJ_T0093875.1 MGP_WSBEiJ_G0034569.1 mouse_genomes_project 9 124080839 124105983 + MGP_WSBEiJ_P0093875 Abhd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093876.1 MGP_WSBEiJ_G0034569.1 mouse_genomes_project 9 124080841 124104090 + MGP_WSBEiJ_P0093876 Abhd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093877.1 MGP_WSBEiJ_G0034569.1 mouse_genomes_project 9 124089873 124094481 + MGP_WSBEiJ_P0093877 Abhd5 protein_coding protein_coding MGP_WSBEiJ_T0089730.1 MGP_WSBEiJ_G0033455.1 mouse_genomes_project 9 4668492 4687685 - MGP_WSBEiJ_P0089730 Birc2 protein_coding protein_coding MGP_WSBEiJ_T0089731.1 MGP_WSBEiJ_G0033455.1 mouse_genomes_project 9 4668501 4685968 - MGP_WSBEiJ_P0089731 Birc2 protein_coding protein_coding MGP_WSBEiJ_T0089732.1 MGP_WSBEiJ_G0033455.1 mouse_genomes_project 9 4685496 4687433 - Birc2 protein_coding processed_transcript MGP_WSBEiJ_T0089733.1 MGP_WSBEiJ_G0033455.1 mouse_genomes_project 9 4686460 4687691 - Birc2 protein_coding retained_intron MGP_WSBEiJ_T0089734.1 MGP_WSBEiJ_G0033455.1 mouse_genomes_project 9 4687314 4687692 - MGP_WSBEiJ_P0089734 Birc2 protein_coding protein_coding MGP_WSBEiJ_T0092222.1 MGP_WSBEiJ_G0034246.1 mouse_genomes_project 9 92613770 92680834 + MGP_WSBEiJ_P0092222 Plod2 protein_coding protein_coding MGP_WSBEiJ_T0092223.1 MGP_WSBEiJ_G0034246.1 mouse_genomes_project 9 92613811 92680826 + MGP_WSBEiJ_P0092223 Plod2 protein_coding protein_coding MGP_WSBEiJ_T0092224.1 MGP_WSBEiJ_G0034246.1 mouse_genomes_project 9 92645761 92664095 + Plod2 protein_coding retained_intron MGP_WSBEiJ_T0092225.1 MGP_WSBEiJ_G0034246.1 mouse_genomes_project 9 92667755 92673474 + Plod2 protein_coding retained_intron MGP_WSBEiJ_T0092226.1 MGP_WSBEiJ_G0034246.1 mouse_genomes_project 9 92673749 92675025 + Plod2 protein_coding retained_intron MGP_WSBEiJ_T0098613.1 MGP_WSBEiJ_G0037276.1 mouse_genomes_project 9 69808419 69808518 + Gm23588 snRNA snRNA MGP_WSBEiJ_T0015504.1 MGP_WSBEiJ_G0013634.1 mouse_genomes_project 9 18447880 18448239 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091138.1 MGP_WSBEiJ_G0033985.1 mouse_genomes_project 9 56138371 56141570 + MGP_WSBEiJ_P0091138 Fam219b protein_coding protein_coding MGP_WSBEiJ_T0005348.1 MGP_WSBEiJ_G0004528.1 mouse_genomes_project 9 32318125 32329469 - Kirrel3os antisense antisense MGP_WSBEiJ_T0090526.1 MGP_WSBEiJ_G0033787.1 mouse_genomes_project 9 38571904 38657903 + Clmp protein_coding processed_transcript MGP_WSBEiJ_T0090527.1 MGP_WSBEiJ_G0033787.1 mouse_genomes_project 9 38571955 38684605 + MGP_WSBEiJ_P0090527 Clmp protein_coding protein_coding MGP_WSBEiJ_T0090528.1 MGP_WSBEiJ_G0033787.1 mouse_genomes_project 9 38571978 38658026 + Clmp protein_coding retained_intron MGP_WSBEiJ_T0090529.1 MGP_WSBEiJ_G0033787.1 mouse_genomes_project 9 38672330 38681776 + Clmp protein_coding processed_transcript MGP_WSBEiJ_T0015549.1 MGP_WSBEiJ_G0013679.1 mouse_genomes_project 9 72242094 72242401 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098588.1 MGP_WSBEiJ_G0037251.1 mouse_genomes_project 9 29800600 29800707 - Gm22060 snRNA snRNA MGP_WSBEiJ_T0092503.1 MGP_WSBEiJ_G0034307.1 mouse_genomes_project 9 103449793 103481781 + Slco2a1 protein_coding processed_transcript MGP_WSBEiJ_T0092504.1 MGP_WSBEiJ_G0034307.1 mouse_genomes_project 9 103469036 103554136 + MGP_WSBEiJ_P0092504 Slco2a1 protein_coding protein_coding MGP_WSBEiJ_T0092505.1 MGP_WSBEiJ_G0034307.1 mouse_genomes_project 9 103469188 103472955 + Slco2a1 protein_coding retained_intron MGP_WSBEiJ_T0092506.1 MGP_WSBEiJ_G0034307.1 mouse_genomes_project 9 103469533 103561830 + MGP_WSBEiJ_P0092506 Slco2a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002408.1 MGP_WSBEiJ_G0002324.1 mouse_genomes_project 9 106320668 106321293 + TEC TEC MGP_WSBEiJ_T0092031.1 MGP_WSBEiJ_G0034204.1 mouse_genomes_project 9 83617949 83647179 - MGP_WSBEiJ_P0092031 Elovl4 protein_coding protein_coding MGP_WSBEiJ_T0092032.1 MGP_WSBEiJ_G0034204.1 mouse_genomes_project 9 83620807 83647204 - MGP_WSBEiJ_P0092032 Elovl4 protein_coding protein_coding MGP_WSBEiJ_T0002307.1 MGP_WSBEiJ_G0002224.1 mouse_genomes_project 9 29880218 29882053 - TEC TEC MGP_WSBEiJ_T0002318.1 MGP_WSBEiJ_G0002235.1 mouse_genomes_project 9 71192285 71194022 - TEC TEC MGP_WSBEiJ_T0090461.1 MGP_WSBEiJ_G0033746.1 mouse_genomes_project 9 36793225 36794161 + MGP_WSBEiJ_P0090461 protein_coding protein_coding MGP_WSBEiJ_T0090501.1 MGP_WSBEiJ_G0033780.1 mouse_genomes_project 9 38002038 38004802 + MGP_WSBEiJ_P0090501 Tmem225 protein_coding protein_coding MGP_WSBEiJ_T0092563.1 MGP_WSBEiJ_G0034321.1 mouse_genomes_project 9 104581450 104602515 - Ackr4 protein_coding processed_transcript MGP_WSBEiJ_T0092566.1 MGP_WSBEiJ_G0034321.1 mouse_genomes_project 9 104598080 104629564 - MGP_WSBEiJ_P0092566 Ackr4 protein_coding protein_coding MGP_WSBEiJ_T0092567.1 MGP_WSBEiJ_G0034321.1 mouse_genomes_project 9 104598211 104602974 - MGP_WSBEiJ_P0092567 Ackr4 protein_coding protein_coding MGP_WSBEiJ_T0089761.1 MGP_WSBEiJ_G0033464.1 mouse_genomes_project 9 5824717 6076778 - MGP_WSBEiJ_P0089761 Arhgap42 protein_coding protein_coding MGP_WSBEiJ_T0089762.1 MGP_WSBEiJ_G0033464.1 mouse_genomes_project 9 5824773 6076456 - MGP_WSBEiJ_P0089762 Arhgap42 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089763.1 MGP_WSBEiJ_G0033464.1 mouse_genomes_project 9 5841574 6076778 - Arhgap42 protein_coding retained_intron MGP_WSBEiJ_T0089764.1 MGP_WSBEiJ_G0033464.1 mouse_genomes_project 9 5981407 6076703 - MGP_WSBEiJ_P0089764 Arhgap42 protein_coding protein_coding MGP_WSBEiJ_T0093443.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111288505 111329306 + MGP_WSBEiJ_P0093443 Scap protein_coding protein_coding MGP_WSBEiJ_T0093444.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111288513 111309733 + Scap protein_coding retained_intron MGP_WSBEiJ_T0093445.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111288573 111341025 + MGP_WSBEiJ_P0093445 Scap protein_coding protein_coding MGP_WSBEiJ_T0093446.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111288767 111309581 + MGP_WSBEiJ_P0093446 Scap protein_coding protein_coding MGP_WSBEiJ_T0093447.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111288853 111328538 + MGP_WSBEiJ_P0093447 Scap protein_coding protein_coding MGP_WSBEiJ_T0093448.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111300621 111309581 + MGP_WSBEiJ_P0093448 Scap protein_coding protein_coding MGP_WSBEiJ_T0093449.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111317419 111319920 + Scap protein_coding retained_intron MGP_WSBEiJ_T0093450.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111317852 111328507 + Scap protein_coding processed_transcript MGP_WSBEiJ_T0093451.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111330534 111332907 + Scap protein_coding retained_intron MGP_WSBEiJ_T0093452.1 MGP_WSBEiJ_G0034456.1 mouse_genomes_project 9 111334381 111334865 + Scap protein_coding retained_intron MGP_WSBEiJ_T0099838.1 MGP_WSBEiJ_G0038501.1 mouse_genomes_project 9 22024149 22024283 + Gm23893 snoRNA snoRNA MGP_WSBEiJ_T0010920.1 MGP_WSBEiJ_G0009077.1 mouse_genomes_project 9 120555956 120556046 + Mir26a-1 miRNA miRNA MGP_WSBEiJ_T0093517.1 MGP_WSBEiJ_G0034469.1 mouse_genomes_project 9 111808959 111814674 + MGP_WSBEiJ_P0093517 Prss43 protein_coding protein_coding MGP_WSBEiJ_T0002401.1 MGP_WSBEiJ_G0002317.1 mouse_genomes_project 9 104027603 104029750 - TEC TEC MGP_WSBEiJ_T0002399.1 MGP_WSBEiJ_G0002315.1 mouse_genomes_project 9 103912020 103914228 + TEC TEC MGP_WSBEiJ_T0009066.1 MGP_WSBEiJ_G0007293.1 mouse_genomes_project 9 24312685 24313073 - Gm29172 lincRNA lincRNA MGP_WSBEiJ_T0009169.1 MGP_WSBEiJ_G0007376.1 mouse_genomes_project 9 102779785 102788581 + Gm26846 lincRNA lincRNA MGP_WSBEiJ_T0090226.1 MGP_WSBEiJ_G0033641.1 mouse_genomes_project 9 29448788 29611863 + MGP_WSBEiJ_P0090226 Arhgap32 protein_coding protein_coding MGP_WSBEiJ_T0090227.1 MGP_WSBEiJ_G0033641.1 mouse_genomes_project 9 29462208 29520238 + MGP_WSBEiJ_P0090227 Arhgap32 protein_coding protein_coding MGP_WSBEiJ_T0090228.1 MGP_WSBEiJ_G0033641.1 mouse_genomes_project 9 29520182 29548669 + Arhgap32 protein_coding retained_intron MGP_WSBEiJ_T0090229.1 MGP_WSBEiJ_G0033641.1 mouse_genomes_project 9 29547753 29604643 + MGP_WSBEiJ_P0090229 Arhgap32 protein_coding protein_coding MGP_WSBEiJ_T0090230.1 MGP_WSBEiJ_G0033641.1 mouse_genomes_project 9 29566330 29607662 + MGP_WSBEiJ_P0090230 Arhgap32 protein_coding protein_coding MGP_WSBEiJ_T0090231.1 MGP_WSBEiJ_G0033641.1 mouse_genomes_project 9 29566673 29588594 + MGP_WSBEiJ_P0090231 Arhgap32 protein_coding protein_coding MGP_WSBEiJ_T0090232.1 MGP_WSBEiJ_G0033641.1 mouse_genomes_project 9 29587774 29592075 + Arhgap32 protein_coding retained_intron MGP_WSBEiJ_T0009145.1 MGP_WSBEiJ_G0007357.1 mouse_genomes_project 9 90823254 90828022 - Gm28703 lincRNA lincRNA MGP_WSBEiJ_T0090208.1 MGP_WSBEiJ_G0033636.1 mouse_genomes_project 9 28424109 28488031 - MGP_WSBEiJ_P0090208 Aplp2 protein_coding protein_coding MGP_WSBEiJ_T0090209.1 MGP_WSBEiJ_G0033636.1 mouse_genomes_project 9 28424109 28488031 - MGP_WSBEiJ_P0090209 Aplp2 protein_coding protein_coding MGP_WSBEiJ_T0090067.1 MGP_WSBEiJ_G0033579.1 mouse_genomes_project 9 18665243 18694353 + MGP_WSBEiJ_P0090067 Ldlr protein_coding protein_coding MGP_WSBEiJ_T0099895.1 MGP_WSBEiJ_G0038558.1 mouse_genomes_project 9 121732343 121732499 + Gm24044 snoRNA snoRNA MGP_WSBEiJ_T0091232.1 MGP_WSBEiJ_G0034011.1 mouse_genomes_project 9 57344600 57351067 - Rec114 protein_coding processed_transcript MGP_WSBEiJ_T0091233.1 MGP_WSBEiJ_G0034011.1 mouse_genomes_project 9 57344628 57356045 - Rec114 protein_coding processed_transcript MGP_WSBEiJ_T0091234.1 MGP_WSBEiJ_G0034011.1 mouse_genomes_project 9 57344631 57352143 - MGP_WSBEiJ_P0091234 Rec114 protein_coding protein_coding MGP_WSBEiJ_T0091235.1 MGP_WSBEiJ_G0034011.1 mouse_genomes_project 9 57344692 57431552 - MGP_WSBEiJ_P0091235 Rec114 protein_coding protein_coding MGP_WSBEiJ_T0090562.1 MGP_WSBEiJ_G0033798.1 mouse_genomes_project 9 40976413 41120360 - MGP_WSBEiJ_P0090562 Arhgef12 protein_coding protein_coding MGP_WSBEiJ_T0090563.1 MGP_WSBEiJ_G0033798.1 mouse_genomes_project 9 40977662 41120689 - MGP_WSBEiJ_P0090563 Arhgef12 protein_coding protein_coding MGP_WSBEiJ_T0092611.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105960069 105970395 + MGP_WSBEiJ_P0092611 Aste1 protein_coding protein_coding MGP_WSBEiJ_T0092612.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105960077 105966826 + Aste1 protein_coding retained_intron MGP_WSBEiJ_T0092613.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105960092 105970104 + Aste1 protein_coding retained_intron MGP_WSBEiJ_T0092614.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105960221 105966295 + MGP_WSBEiJ_P0092614 Aste1 protein_coding protein_coding MGP_WSBEiJ_T0092615.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105961897 105969810 + MGP_WSBEiJ_P0092615 Aste1 protein_coding protein_coding MGP_WSBEiJ_T0092616.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105962495 105969965 + MGP_WSBEiJ_P0092616 Aste1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092617.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105962495 105975221 + MGP_WSBEiJ_P0092617 Aste1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092618.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105965471 105969965 + Aste1 protein_coding processed_transcript MGP_WSBEiJ_T0092619.1 MGP_WSBEiJ_G0034329.1 mouse_genomes_project 9 105966156 105970395 + MGP_WSBEiJ_P0092619 Aste1 protein_coding protein_coding MGP_WSBEiJ_T0090174.1 MGP_WSBEiJ_G0033626.1 mouse_genomes_project 9 24207583 24269790 - MGP_WSBEiJ_P0090174 Jam3 protein_coding protein_coding MGP_WSBEiJ_T0090175.1 MGP_WSBEiJ_G0033626.1 mouse_genomes_project 9 24210866 24269787 - MGP_WSBEiJ_P0090175 Jam3 protein_coding protein_coding MGP_WSBEiJ_T0015532.1 MGP_WSBEiJ_G0013662.1 mouse_genomes_project 9 55777196 55777672 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017897.1 MGP_WSBEiJ_G0015150.1 mouse_genomes_project 9 18117428 18128191 + Gm16754 processed_transcript antisense MGP_WSBEiJ_T0017898.1 MGP_WSBEiJ_G0015150.1 mouse_genomes_project 9 18117428 18120634 + Gm16754 processed_transcript retained_intron MGP_WSBEiJ_T0017899.1 MGP_WSBEiJ_G0015150.1 mouse_genomes_project 9 18117460 18128600 + Gm16754 processed_transcript antisense MGP_WSBEiJ_T0093918.1 MGP_WSBEiJ_G0034587.1 mouse_genomes_project 9 125304437 125367306 + MGP_WSBEiJ_P0093918 Sacm1l protein_coding protein_coding MGP_WSBEiJ_T0002397.1 MGP_WSBEiJ_G0002313.1 mouse_genomes_project 9 103137661 103140486 - TEC TEC MGP_WSBEiJ_T0002411.1 MGP_WSBEiJ_G0002327.1 mouse_genomes_project 9 108367184 108368383 + TEC TEC MGP_WSBEiJ_T0009177.1 MGP_WSBEiJ_G0007383.1 mouse_genomes_project 9 107907111 107909937 + 1700039M15Rik lincRNA lincRNA MGP_WSBEiJ_T0092228.1 MGP_WSBEiJ_G0034248.1 mouse_genomes_project 9 94763510 95338388 + MGP_WSBEiJ_P0092228 Slc9a9 protein_coding protein_coding MGP_WSBEiJ_T0092229.1 MGP_WSBEiJ_G0034248.1 mouse_genomes_project 9 94763533 94816081 + Slc9a9 protein_coding processed_transcript MGP_WSBEiJ_T0092230.1 MGP_WSBEiJ_G0034248.1 mouse_genomes_project 9 95037562 95338395 + MGP_WSBEiJ_P0092230 Slc9a9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092231.1 MGP_WSBEiJ_G0034248.1 mouse_genomes_project 9 95227624 95230476 + Slc9a9 protein_coding retained_intron MGP_WSBEiJ_T0092812.1 MGP_WSBEiJ_G0034365.1 mouse_genomes_project 9 107999838 108012931 - MGP_WSBEiJ_P0092812 Hemk1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092813.1 MGP_WSBEiJ_G0034365.1 mouse_genomes_project 9 107999848 108010954 - MGP_WSBEiJ_P0092813 Hemk1 protein_coding protein_coding MGP_WSBEiJ_T0092814.1 MGP_WSBEiJ_G0034365.1 mouse_genomes_project 9 108000456 108010922 - Hemk1 protein_coding retained_intron MGP_WSBEiJ_T0092815.1 MGP_WSBEiJ_G0034365.1 mouse_genomes_project 9 108000474 108009263 - Hemk1 protein_coding processed_transcript MGP_WSBEiJ_T0092816.1 MGP_WSBEiJ_G0034365.1 mouse_genomes_project 9 108000476 108002217 - Hemk1 protein_coding retained_intron MGP_WSBEiJ_T0092817.1 MGP_WSBEiJ_G0034365.1 mouse_genomes_project 9 108000755 108010937 - MGP_WSBEiJ_P0092817 Hemk1 protein_coding protein_coding MGP_WSBEiJ_T0092818.1 MGP_WSBEiJ_G0034365.1 mouse_genomes_project 9 108002124 108003432 - Hemk1 protein_coding retained_intron MGP_WSBEiJ_T0092819.1 MGP_WSBEiJ_G0034365.1 mouse_genomes_project 9 108007745 108010906 - Hemk1 protein_coding retained_intron MGP_WSBEiJ_T0098590.1 MGP_WSBEiJ_G0037253.1 mouse_genomes_project 9 35410166 35410365 - Gm24764 snRNA snRNA MGP_WSBEiJ_T0011543.1 MGP_WSBEiJ_G0009700.1 mouse_genomes_project 9 89991753 89992021 + Gm23759 misc_RNA misc_RNA MGP_WSBEiJ_T0090842.1 MGP_WSBEiJ_G0033892.1 mouse_genomes_project 9 47850405 48157403 - MGP_WSBEiJ_P0090842 Ncam1 protein_coding protein_coding MGP_WSBEiJ_T0090843.1 MGP_WSBEiJ_G0033892.1 mouse_genomes_project 9 47850418 47918580 - MGP_WSBEiJ_P0090843 Ncam1 protein_coding protein_coding MGP_WSBEiJ_T0090844.1 MGP_WSBEiJ_G0033892.1 mouse_genomes_project 9 47853309 48157350 - MGP_WSBEiJ_P0090844 Ncam1 protein_coding protein_coding MGP_WSBEiJ_T0090845.1 MGP_WSBEiJ_G0033892.1 mouse_genomes_project 9 47865537 48157368 - MGP_WSBEiJ_P0090845 Ncam1 protein_coding protein_coding MGP_WSBEiJ_T0090847.1 MGP_WSBEiJ_G0033892.1 mouse_genomes_project 9 47872572 47892476 - MGP_WSBEiJ_P0090847 Ncam1 protein_coding protein_coding MGP_WSBEiJ_T0090848.1 MGP_WSBEiJ_G0033892.1 mouse_genomes_project 9 47880179 48157236 - MGP_WSBEiJ_P0090848 Ncam1 protein_coding protein_coding MGP_WSBEiJ_T0092232.1 MGP_WSBEiJ_G0034249.1 mouse_genomes_project 9 95507927 95515278 - MGP_WSBEiJ_P0092232 Chst2 protein_coding protein_coding MGP_WSBEiJ_T0009108.1 MGP_WSBEiJ_G0007328.1 mouse_genomes_project 9 62998353 63002618 + 1110036E04Rik lincRNA lincRNA MGP_WSBEiJ_T0098615.1 MGP_WSBEiJ_G0037278.1 mouse_genomes_project 9 69830100 69830208 + Gm22229 snRNA snRNA MGP_WSBEiJ_T0010888.1 MGP_WSBEiJ_G0009045.1 mouse_genomes_project 9 63709913 63710020 - miRNA miRNA MGP_WSBEiJ_T0091583.1 MGP_WSBEiJ_G0034105.1 mouse_genomes_project 9 66996177 67157170 + MGP_WSBEiJ_P0091583 Vps13c protein_coding protein_coding MGP_WSBEiJ_T0091584.1 MGP_WSBEiJ_G0034105.1 mouse_genomes_project 9 66996208 67142482 + MGP_WSBEiJ_P0091584 Vps13c protein_coding unknown_likely_coding MGP_WSBEiJ_T0090535.1 MGP_WSBEiJ_G0033791.1 mouse_genomes_project 9 38879363 38891029 - MGP_WSBEiJ_P0090535 Crtam protein_coding protein_coding MGP_WSBEiJ_T0090536.1 MGP_WSBEiJ_G0033791.1 mouse_genomes_project 9 38879404 38911769 - MGP_WSBEiJ_P0090536 Crtam protein_coding protein_coding MGP_WSBEiJ_T0090537.1 MGP_WSBEiJ_G0033791.1 mouse_genomes_project 9 38879406 38911801 - MGP_WSBEiJ_P0090537 Crtam protein_coding protein_coding MGP_WSBEiJ_T0090538.1 MGP_WSBEiJ_G0033791.1 mouse_genomes_project 9 38879407 38911811 - MGP_WSBEiJ_P0090538 Crtam protein_coding protein_coding MGP_WSBEiJ_T0009144.1 MGP_WSBEiJ_G0007356.1 mouse_genomes_project 9 90057915 90060885 + lincRNA lincRNA MGP_WSBEiJ_T0011537.1 MGP_WSBEiJ_G0009694.1 mouse_genomes_project 9 53026528 53026746 + Gm25980 misc_RNA misc_RNA MGP_WSBEiJ_T0089805.1 MGP_WSBEiJ_G0033475.1 mouse_genomes_project 9 11216784 11258164 - MGP_WSBEiJ_P0089805 Kdm4d protein_coding protein_coding MGP_WSBEiJ_T0089806.1 MGP_WSBEiJ_G0033475.1 mouse_genomes_project 9 11217445 11258082 - MGP_WSBEiJ_P0089806 Kdm4d protein_coding protein_coding MGP_WSBEiJ_T0090472.1 MGP_WSBEiJ_G0033757.1 mouse_genomes_project 9 37371970 37389564 - MGP_WSBEiJ_P0090472 AW551984 protein_coding protein_coding MGP_WSBEiJ_T0090473.1 MGP_WSBEiJ_G0033757.1 mouse_genomes_project 9 37372084 37389127 - MGP_WSBEiJ_P0090473 AW551984 protein_coding protein_coding MGP_WSBEiJ_T0090474.1 MGP_WSBEiJ_G0033757.1 mouse_genomes_project 9 37373536 37375558 - AW551984 protein_coding retained_intron MGP_WSBEiJ_T0090475.1 MGP_WSBEiJ_G0033757.1 mouse_genomes_project 9 37375163 37376794 - AW551984 protein_coding retained_intron MGP_WSBEiJ_T0090476.1 MGP_WSBEiJ_G0033757.1 mouse_genomes_project 9 37385090 37389869 - MGP_WSBEiJ_P0090476 AW551984 protein_coding protein_coding MGP_WSBEiJ_T0090477.1 MGP_WSBEiJ_G0033757.1 mouse_genomes_project 9 37385727 37389067 - AW551984 protein_coding retained_intron MGP_WSBEiJ_T0090478.1 MGP_WSBEiJ_G0033757.1 mouse_genomes_project 9 37385987 37388818 - MGP_WSBEiJ_P0090478 AW551984 protein_coding protein_coding MGP_WSBEiJ_T0089817.1 MGP_WSBEiJ_G0033480.1 mouse_genomes_project 9 11531963 11539093 - MGP_WSBEiJ_P0089817 1700012B09Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089818.1 MGP_WSBEiJ_G0033480.1 mouse_genomes_project 9 11531969 11548450 - MGP_WSBEiJ_P0089818 1700012B09Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089819.1 MGP_WSBEiJ_G0033480.1 mouse_genomes_project 9 11531971 11539049 - MGP_WSBEiJ_P0089819 1700012B09Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089820.1 MGP_WSBEiJ_G0033480.1 mouse_genomes_project 9 11533538 11548467 - MGP_WSBEiJ_P0089820 1700012B09Rik protein_coding protein_coding MGP_WSBEiJ_T0089821.1 MGP_WSBEiJ_G0033480.1 mouse_genomes_project 9 11533538 11548450 - MGP_WSBEiJ_P0089821 1700012B09Rik protein_coding protein_coding MGP_WSBEiJ_T0092661.1 MGP_WSBEiJ_G0034335.1 mouse_genomes_project 9 106776083 106781376 - MGP_WSBEiJ_P0092661 Glyctk protein_coding protein_coding MGP_WSBEiJ_T0092662.1 MGP_WSBEiJ_G0034335.1 mouse_genomes_project 9 106776095 106781396 - MGP_WSBEiJ_P0092662 Glyctk protein_coding protein_coding MGP_WSBEiJ_T0092663.1 MGP_WSBEiJ_G0034335.1 mouse_genomes_project 9 106780548 106781375 - MGP_WSBEiJ_P0092663 Glyctk protein_coding protein_coding MGP_WSBEiJ_T0092664.1 MGP_WSBEiJ_G0034335.1 mouse_genomes_project 9 106780847 106781368 - MGP_WSBEiJ_P0092664 Glyctk protein_coding protein_coding MGP_WSBEiJ_T0015542.1 MGP_WSBEiJ_G0013672.1 mouse_genomes_project 9 71179570 71179832 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009201.1 MGP_WSBEiJ_G0007400.1 mouse_genomes_project 9 121000258 121006812 - 4930516B21Rik lincRNA lincRNA MGP_WSBEiJ_T0092465.1 MGP_WSBEiJ_G0034300.1 mouse_genomes_project 9 102359323 102364072 + MGP_WSBEiJ_P0092465 9630041A04Rik protein_coding protein_coding MGP_WSBEiJ_T0010901.1 MGP_WSBEiJ_G0009058.1 mouse_genomes_project 9 104943270 104943345 + Mir2136 miRNA miRNA MGP_WSBEiJ_T0010914.1 MGP_WSBEiJ_G0009071.1 mouse_genomes_project 9 111230744 111230867 + Mir6236 miRNA miRNA MGP_WSBEiJ_T0093891.1 MGP_WSBEiJ_G0034577.1 mouse_genomes_project 9 124701449 124773874 + MGP_WSBEiJ_P0093891 Kif15 protein_coding protein_coding MGP_WSBEiJ_T0091549.1 MGP_WSBEiJ_G0034098.1 mouse_genomes_project 9 65958337 66035575 - MGP_WSBEiJ_P0091549 Rab8b protein_coding protein_coding MGP_WSBEiJ_T0015632.1 MGP_WSBEiJ_G0013762.1 mouse_genomes_project 9 107737252 107738455 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002396.1 MGP_WSBEiJ_G0002312.1 mouse_genomes_project 9 102712590 102713846 + TEC TEC MGP_WSBEiJ_T0093815.1 MGP_WSBEiJ_G0034550.1 mouse_genomes_project 9 123040794 123148211 + MGP_WSBEiJ_P0093815 Trak1 protein_coding protein_coding MGP_WSBEiJ_T0093816.1 MGP_WSBEiJ_G0034550.1 mouse_genomes_project 9 123083835 123129262 + MGP_WSBEiJ_P0093816 Trak1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090113.1 MGP_WSBEiJ_G0033604.1 mouse_genomes_project 9 19327692 19392530 - MGP_WSBEiJ_P0090113 Anln protein_coding protein_coding MGP_WSBEiJ_T0015537.1 MGP_WSBEiJ_G0013667.1 mouse_genomes_project 9 58602419 58602696 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002425.1 MGP_WSBEiJ_G0002341.1 mouse_genomes_project 9 111507115 111509202 + TEC TEC MGP_WSBEiJ_T0091249.1 MGP_WSBEiJ_G0034017.1 mouse_genomes_project 9 58246436 58253107 - MGP_WSBEiJ_P0091249 Tmem202 protein_coding protein_coding MGP_WSBEiJ_T0015640.1 MGP_WSBEiJ_G0013770.1 mouse_genomes_project 9 118489402 118489955 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091443.1 MGP_WSBEiJ_G0034067.1 mouse_genomes_project 9 64149511 64198171 + MGP_WSBEiJ_P0091443 Igdcc3 protein_coding protein_coding MGP_WSBEiJ_T0091444.1 MGP_WSBEiJ_G0034067.1 mouse_genomes_project 9 64149748 64199348 + MGP_WSBEiJ_P0091444 Igdcc3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091845.1 MGP_WSBEiJ_G0034158.1 mouse_genomes_project 9 75064474 75111804 - MGP_WSBEiJ_P0091845 Tmod2 protein_coding protein_coding MGP_WSBEiJ_T0091846.1 MGP_WSBEiJ_G0034158.1 mouse_genomes_project 9 75064474 75099300 - MGP_WSBEiJ_P0091846 Tmod2 protein_coding protein_coding MGP_WSBEiJ_T0091847.1 MGP_WSBEiJ_G0034158.1 mouse_genomes_project 9 75072705 75097818 - MGP_WSBEiJ_P0091847 Tmod2 protein_coding protein_coding MGP_WSBEiJ_T0090644.1 MGP_WSBEiJ_G0033829.1 mouse_genomes_project 9 42549620 42551672 - MGP_WSBEiJ_P0090644 Upk2 protein_coding protein_coding MGP_WSBEiJ_T0089822.1 MGP_WSBEiJ_G0033481.1 mouse_genomes_project 9 11557262 11560019 - MGP_WSBEiJ_P0089822 Ankrd49 protein_coding protein_coding MGP_WSBEiJ_T0092560.1 MGP_WSBEiJ_G0034320.1 mouse_genomes_project 9 104555626 104630094 + MGP_WSBEiJ_P0092560 Acad11 protein_coding protein_coding MGP_WSBEiJ_T0092561.1 MGP_WSBEiJ_G0034320.1 mouse_genomes_project 9 104555932 104630287 + MGP_WSBEiJ_P0092561 Acad11 protein_coding protein_coding MGP_WSBEiJ_T0092562.1 MGP_WSBEiJ_G0034320.1 mouse_genomes_project 9 104555968 104557926 + Acad11 protein_coding retained_intron MGP_WSBEiJ_T0092564.1 MGP_WSBEiJ_G0034320.1 mouse_genomes_project 9 104591009 104616248 + Acad11 protein_coding processed_transcript MGP_WSBEiJ_T0092565.1 MGP_WSBEiJ_G0034320.1 mouse_genomes_project 9 104595460 104610766 + MGP_WSBEiJ_P0092565 Acad11 protein_coding protein_coding MGP_WSBEiJ_T0092568.1 MGP_WSBEiJ_G0034320.1 mouse_genomes_project 9 104613126 104616586 + Acad11 protein_coding retained_intron MGP_WSBEiJ_T0092569.1 MGP_WSBEiJ_G0034320.1 mouse_genomes_project 9 104626476 104629650 + Acad11 protein_coding processed_transcript MGP_WSBEiJ_T0015506.1 MGP_WSBEiJ_G0013636.1 mouse_genomes_project 9 19707430 19707898 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090012.1 MGP_WSBEiJ_G0033565.1 mouse_genomes_project 9 18160849 18170520 + MGP_WSBEiJ_P0090012 Atg4d protein_coding protein_coding MGP_WSBEiJ_T0092059.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86384810 86477726 + MGP_WSBEiJ_P0092059 Dopey1 protein_coding protein_coding MGP_WSBEiJ_T0092060.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86384826 86430885 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092061.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86384826 86467207 + MGP_WSBEiJ_P0092061 Dopey1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092062.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86384833 86467169 + MGP_WSBEiJ_P0092062 Dopey1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092063.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86384835 86425776 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092064.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86384867 86426900 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092065.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86384867 86435626 + MGP_WSBEiJ_P0092065 Dopey1 protein_coding protein_coding MGP_WSBEiJ_T0092066.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86384870 86477603 + MGP_WSBEiJ_P0092066 Dopey1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092067.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86407182 86477605 + MGP_WSBEiJ_P0092067 Dopey1 protein_coding protein_coding MGP_WSBEiJ_T0092068.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86409041 86411847 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092069.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86411375 86414277 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092070.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86419633 86423603 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092071.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86426246 86430161 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092072.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86426538 86438989 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092073.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86443765 86447708 + MGP_WSBEiJ_P0092073 Dopey1 protein_coding protein_coding MGP_WSBEiJ_T0092074.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86446114 86468266 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092075.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86452785 86476424 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092076.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86454248 86476429 + MGP_WSBEiJ_P0092076 Dopey1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092077.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86464616 86470905 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0092078.1 MGP_WSBEiJ_G0034211.1 mouse_genomes_project 9 86471404 86476429 + Dopey1 protein_coding retained_intron MGP_WSBEiJ_T0098599.1 MGP_WSBEiJ_G0037262.1 mouse_genomes_project 9 48186557 48186664 - Gm25633 snRNA snRNA MGP_WSBEiJ_T0015552.1 MGP_WSBEiJ_G0013682.1 mouse_genomes_project 9 73109088 73109248 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017896.1 MGP_WSBEiJ_G0015149.1 mouse_genomes_project 9 12142107 12146880 + Gm16568 processed_transcript processed_transcript MGP_WSBEiJ_T0090088.1 MGP_WSBEiJ_G0033591.1 mouse_genomes_project 9 18949053 18975600 - MGP_WSBEiJ_P0090088 Ccdc151 protein_coding protein_coding MGP_WSBEiJ_T0090089.1 MGP_WSBEiJ_G0033591.1 mouse_genomes_project 9 18949053 18975600 - MGP_WSBEiJ_P0090089 Ccdc151 protein_coding protein_coding MGP_WSBEiJ_T0092868.1 MGP_WSBEiJ_G0034375.1 mouse_genomes_project 9 108260588 108265268 + MGP_WSBEiJ_P0092868 Hyal1 protein_coding protein_coding MGP_WSBEiJ_T0092869.1 MGP_WSBEiJ_G0034375.1 mouse_genomes_project 9 108260599 108263123 + MGP_WSBEiJ_P0092869 Hyal1 protein_coding protein_coding MGP_WSBEiJ_T0092870.1 MGP_WSBEiJ_G0034375.1 mouse_genomes_project 9 108260619 108264542 + MGP_WSBEiJ_P0092870 Hyal1 protein_coding protein_coding MGP_WSBEiJ_T0092871.1 MGP_WSBEiJ_G0034375.1 mouse_genomes_project 9 108260651 108262979 + MGP_WSBEiJ_P0092871 Hyal1 protein_coding protein_coding MGP_WSBEiJ_T0092878.1 MGP_WSBEiJ_G0034375.1 mouse_genomes_project 9 108263157 108265235 + Hyal1 protein_coding retained_intron MGP_WSBEiJ_T0015593.1 MGP_WSBEiJ_G0013723.1 mouse_genomes_project 9 91238544 91238986 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017906.1 MGP_WSBEiJ_G0015152.1 mouse_genomes_project 9 33570391 33597460 - processed_transcript lincRNA MGP_WSBEiJ_T0017907.1 MGP_WSBEiJ_G0015152.1 mouse_genomes_project 9 33570432 33597512 - processed_transcript lincRNA MGP_WSBEiJ_T0092585.1 MGP_WSBEiJ_G0034323.1 mouse_genomes_project 9 104796957 104849711 - MGP_WSBEiJ_P0092585 Acpp protein_coding protein_coding MGP_WSBEiJ_T0092586.1 MGP_WSBEiJ_G0034323.1 mouse_genomes_project 9 104799699 104809884 - Acpp protein_coding processed_transcript MGP_WSBEiJ_T0092587.1 MGP_WSBEiJ_G0034323.1 mouse_genomes_project 9 104807658 104849690 - MGP_WSBEiJ_P0092587 Acpp protein_coding protein_coding MGP_WSBEiJ_T0092588.1 MGP_WSBEiJ_G0034323.1 mouse_genomes_project 9 104815340 104849665 - Acpp protein_coding retained_intron MGP_WSBEiJ_T0092589.1 MGP_WSBEiJ_G0034323.1 mouse_genomes_project 9 104828915 104849690 - Acpp protein_coding retained_intron MGP_WSBEiJ_T0090436.1 MGP_WSBEiJ_G0033727.1 mouse_genomes_project 9 36293391 36294321 - MGP_WSBEiJ_P0090436 Olfr917 protein_coding protein_coding MGP_WSBEiJ_T0093947.1 MGP_WSBEiJ_G0034595.1 mouse_genomes_project 9 125700089 125714319 - MGP_WSBEiJ_P0093947 Ccr1 protein_coding protein_coding MGP_WSBEiJ_T0090831.1 MGP_WSBEiJ_G0033886.1 mouse_genomes_project 9 47385773 47412173 + MGP_WSBEiJ_P0090831 Zw10 protein_coding protein_coding MGP_WSBEiJ_T0009095.1 MGP_WSBEiJ_G0007317.1 mouse_genomes_project 9 55146051 55153807 + Gm26868 lincRNA lincRNA MGP_WSBEiJ_T0090741.1 MGP_WSBEiJ_G0033859.1 mouse_genomes_project 9 44027654 44053402 + MGP_WSBEiJ_P0090741 Bace1 protein_coding protein_coding MGP_WSBEiJ_T0090742.1 MGP_WSBEiJ_G0033859.1 mouse_genomes_project 9 44027654 44051499 + MGP_WSBEiJ_P0090742 Bace1 protein_coding protein_coding MGP_WSBEiJ_T0090743.1 MGP_WSBEiJ_G0033859.1 mouse_genomes_project 9 44028314 44046199 + MGP_WSBEiJ_P0090743 Bace1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090744.1 MGP_WSBEiJ_G0033859.1 mouse_genomes_project 9 44028994 44043742 + Bace1 protein_coding processed_transcript MGP_WSBEiJ_T0090745.1 MGP_WSBEiJ_G0033859.1 mouse_genomes_project 9 44041757 44051237 + Bace1 protein_coding retained_intron MGP_WSBEiJ_T0090746.1 MGP_WSBEiJ_G0033859.1 mouse_genomes_project 9 44043661 44049380 + MGP_WSBEiJ_P0090746 Bace1 protein_coding protein_coding MGP_WSBEiJ_T0092455.1 MGP_WSBEiJ_G0034297.1 mouse_genomes_project 9 101508235 101652482 - MGP_WSBEiJ_P0092455 Ppp2r3a protein_coding protein_coding MGP_WSBEiJ_T0092456.1 MGP_WSBEiJ_G0034297.1 mouse_genomes_project 9 101508437 101594476 - MGP_WSBEiJ_P0092456 Ppp2r3a protein_coding protein_coding MGP_WSBEiJ_T0092457.1 MGP_WSBEiJ_G0034297.1 mouse_genomes_project 9 101511066 101527741 - Ppp2r3a protein_coding processed_transcript MGP_WSBEiJ_T0092458.1 MGP_WSBEiJ_G0034297.1 mouse_genomes_project 9 101526860 101594254 - Ppp2r3a protein_coding retained_intron MGP_WSBEiJ_T0092459.1 MGP_WSBEiJ_G0034297.1 mouse_genomes_project 9 101587994 101594408 - Ppp2r3a protein_coding retained_intron MGP_WSBEiJ_T0092460.1 MGP_WSBEiJ_G0034297.1 mouse_genomes_project 9 101592868 101595941 - Ppp2r3a protein_coding retained_intron MGP_WSBEiJ_T0092461.1 MGP_WSBEiJ_G0034297.1 mouse_genomes_project 9 101601567 101607214 - Ppp2r3a protein_coding processed_transcript MGP_WSBEiJ_T0090828.1 MGP_WSBEiJ_G0033884.1 mouse_genomes_project 9 47257032 47289088 - MGP_WSBEiJ_P0090828 Htr3b protein_coding protein_coding MGP_WSBEiJ_T0090323.1 MGP_WSBEiJ_G0033673.1 mouse_genomes_project 9 34183501 34189142 + MGP_WSBEiJ_P0090323 Acrv1 protein_coding protein_coding MGP_WSBEiJ_T0090324.1 MGP_WSBEiJ_G0033673.1 mouse_genomes_project 9 34183535 34187650 + Acrv1 protein_coding retained_intron MGP_WSBEiJ_T0091156.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56411859 56459627 - MGP_WSBEiJ_P0091156 Arid3b protein_coding protein_coding MGP_WSBEiJ_T0091157.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56411862 56459629 - MGP_WSBEiJ_P0091157 Arid3b protein_coding protein_coding MGP_WSBEiJ_T0091158.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56411865 56413154 - Arid3b protein_coding processed_transcript MGP_WSBEiJ_T0091159.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56412018 56457146 - MGP_WSBEiJ_P0091159 Arid3b protein_coding protein_coding MGP_WSBEiJ_T0091160.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56413666 56417727 - MGP_WSBEiJ_P0091160 Arid3b protein_coding protein_coding MGP_WSBEiJ_T0091161.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56413928 56459399 - MGP_WSBEiJ_P0091161 Arid3b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091162.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56416191 56459682 - MGP_WSBEiJ_P0091162 Arid3b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091163.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56416192 56459714 - MGP_WSBEiJ_P0091163 Arid3b protein_coding protein_coding MGP_WSBEiJ_T0091164.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56419655 56443550 - MGP_WSBEiJ_P0091164 Arid3b protein_coding protein_coding MGP_WSBEiJ_T0091165.1 MGP_WSBEiJ_G0033996.1 mouse_genomes_project 9 56431066 56459691 - Arid3b protein_coding retained_intron MGP_WSBEiJ_T0092788.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107574328 107897672 - MGP_WSBEiJ_P0092788 Dock3 protein_coding protein_coding MGP_WSBEiJ_T0092789.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107574609 107597404 - MGP_WSBEiJ_P0092789 Dock3 protein_coding protein_coding MGP_WSBEiJ_T0092790.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107578280 107584306 - MGP_WSBEiJ_P0092790 Dock3 protein_coding protein_coding MGP_WSBEiJ_T0092791.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107590980 107593034 - Dock3 protein_coding processed_transcript MGP_WSBEiJ_T0092792.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107595761 107597706 - Dock3 protein_coding retained_intron MGP_WSBEiJ_T0092793.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107598904 107635402 - MGP_WSBEiJ_P0092793 Dock3 protein_coding protein_coding MGP_WSBEiJ_T0092794.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107626950 107650309 - MGP_WSBEiJ_P0092794 Dock3 protein_coding protein_coding MGP_WSBEiJ_T0092795.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107712198 107714068 - Dock3 protein_coding retained_intron MGP_WSBEiJ_T0092796.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107740343 107897631 - Dock3 protein_coding retained_intron MGP_WSBEiJ_T0092797.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107765925 107897619 - Dock3 protein_coding retained_intron MGP_WSBEiJ_T0092798.1 MGP_WSBEiJ_G0034362.1 mouse_genomes_project 9 107793300 107897345 - Dock3 protein_coding retained_intron MGP_WSBEiJ_T0099894.1 MGP_WSBEiJ_G0038557.1 mouse_genomes_project 9 120859073 120859202 - Gm22729 snoRNA snoRNA MGP_WSBEiJ_T0093354.1 MGP_WSBEiJ_G0034445.1 mouse_genomes_project 9 110049695 110462658 - MGP_WSBEiJ_P0093354 protein_coding protein_coding MGP_WSBEiJ_T0092347.1 MGP_WSBEiJ_G0034269.1 mouse_genomes_project 9 98674344 98699808 + MGP_WSBEiJ_P0092347 Rbp1 protein_coding protein_coding MGP_WSBEiJ_T0089773.1 MGP_WSBEiJ_G0033468.1 mouse_genomes_project 9 10103037 10433816 + MGP_WSBEiJ_P0089773 protein_coding protein_coding MGP_WSBEiJ_T0089775.1 MGP_WSBEiJ_G0033468.1 mouse_genomes_project 9 10347908 10436416 + MGP_WSBEiJ_P0089775 protein_coding protein_coding MGP_WSBEiJ_T0089776.1 MGP_WSBEiJ_G0033468.1 mouse_genomes_project 9 10349561 10434475 + MGP_WSBEiJ_P0089776 protein_coding protein_coding MGP_WSBEiJ_T0089777.1 MGP_WSBEiJ_G0033468.1 mouse_genomes_project 9 10390375 10434475 + protein_coding processed_transcript MGP_WSBEiJ_T0099836.1 MGP_WSBEiJ_G0038499.1 mouse_genomes_project 9 17764730 17764810 + Gm23008 snoRNA snoRNA MGP_WSBEiJ_T0009197.1 MGP_WSBEiJ_G0007396.1 mouse_genomes_project 9 119371682 119379759 + Gm26614 lincRNA lincRNA MGP_WSBEiJ_T0090437.1 MGP_WSBEiJ_G0033728.1 mouse_genomes_project 9 36324476 36325424 - MGP_WSBEiJ_P0090437 Olfr919 protein_coding protein_coding MGP_WSBEiJ_T0091033.1 MGP_WSBEiJ_G0033952.1 mouse_genomes_project 9 53496820 53525030 + MGP_WSBEiJ_P0091033 Chrna5 protein_coding protein_coding MGP_WSBEiJ_T0091034.1 MGP_WSBEiJ_G0033952.1 mouse_genomes_project 9 53497556 53528674 + MGP_WSBEiJ_P0091034 Chrna5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090892.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49145840 49151450 - MGP_WSBEiJ_P0090892 1110032A03Rik protein_coding protein_coding MGP_WSBEiJ_T0090893.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49146699 49151119 - MGP_WSBEiJ_P0090893 1110032A03Rik protein_coding protein_coding MGP_WSBEiJ_T0090894.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49146701 49149101 - MGP_WSBEiJ_P0090894 1110032A03Rik protein_coding protein_coding MGP_WSBEiJ_T0090895.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49146725 49158612 - 1110032A03Rik protein_coding retained_intron MGP_WSBEiJ_T0090896.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49146728 49147561 - 1110032A03Rik protein_coding retained_intron MGP_WSBEiJ_T0090897.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49146855 49151158 - MGP_WSBEiJ_P0090897 1110032A03Rik protein_coding protein_coding MGP_WSBEiJ_T0090898.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49147695 49151096 - 1110032A03Rik protein_coding processed_transcript MGP_WSBEiJ_T0090899.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49147809 49151167 - 1110032A03Rik protein_coding processed_transcript MGP_WSBEiJ_T0090903.1 MGP_WSBEiJ_G0033908.1 mouse_genomes_project 9 49151591 49153946 - 1110032A03Rik protein_coding processed_transcript MGP_WSBEiJ_T0091214.1 MGP_WSBEiJ_G0034006.1 mouse_genomes_project 9 56962590 56989524 - MGP_WSBEiJ_P0091214 Loxl1 protein_coding protein_coding MGP_WSBEiJ_T0093103.1 MGP_WSBEiJ_G0034408.1 mouse_genomes_project 9 109068375 109069276 + Gpx1 protein_coding retained_intron MGP_WSBEiJ_T0093104.1 MGP_WSBEiJ_G0034408.1 mouse_genomes_project 9 109068526 109069817 + MGP_WSBEiJ_P0093104 Gpx1 protein_coding protein_coding MGP_WSBEiJ_T0093105.1 MGP_WSBEiJ_G0034408.1 mouse_genomes_project 9 109068716 109069724 + MGP_WSBEiJ_P0093105 Gpx1 protein_coding protein_coding MGP_WSBEiJ_T0093106.1 MGP_WSBEiJ_G0034408.1 mouse_genomes_project 9 109068749 109069724 + MGP_WSBEiJ_P0093106 Gpx1 protein_coding protein_coding MGP_WSBEiJ_T0098584.1 MGP_WSBEiJ_G0037247.1 mouse_genomes_project 9 17105651 17105747 - Gm25425 snRNA snRNA MGP_WSBEiJ_T0092678.1 MGP_WSBEiJ_G0034339.1 mouse_genomes_project 9 106847495 106851780 + MGP_WSBEiJ_P0092678 Tlr9 protein_coding protein_coding MGP_WSBEiJ_T0093893.1 MGP_WSBEiJ_G0034579.1 mouse_genomes_project 9 124792066 124793159 + Tgm4 protein_coding processed_transcript MGP_WSBEiJ_T0093894.1 MGP_WSBEiJ_G0034579.1 mouse_genomes_project 9 124792068 124809181 + Tgm4 protein_coding processed_transcript MGP_WSBEiJ_T0093895.1 MGP_WSBEiJ_G0034579.1 mouse_genomes_project 9 124792068 124825161 + MGP_WSBEiJ_P0093895 Tgm4 protein_coding protein_coding MGP_WSBEiJ_T0093896.1 MGP_WSBEiJ_G0034579.1 mouse_genomes_project 9 124797682 124806778 + Tgm4 protein_coding retained_intron MGP_WSBEiJ_T0091446.1 MGP_WSBEiJ_G0034069.1 mouse_genomes_project 9 64282578 64297997 + MGP_WSBEiJ_P0091446 protein_coding protein_coding MGP_WSBEiJ_T0091447.1 MGP_WSBEiJ_G0034069.1 mouse_genomes_project 9 64283222 64297927 + MGP_WSBEiJ_P0091447 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090642.1 MGP_WSBEiJ_G0033827.1 mouse_genomes_project 9 42501826 42511571 - MGP_WSBEiJ_P0090642 Ccdc84 protein_coding protein_coding MGP_WSBEiJ_T0009128.1 MGP_WSBEiJ_G0007344.1 mouse_genomes_project 9 77812165 77815134 + C920006O11Rik lincRNA lincRNA MGP_WSBEiJ_T0092352.1 MGP_WSBEiJ_G0034271.1 mouse_genomes_project 9 98816898 98820494 + Copb2 protein_coding retained_intron MGP_WSBEiJ_T0092353.1 MGP_WSBEiJ_G0034271.1 mouse_genomes_project 9 98816908 98841549 + MGP_WSBEiJ_P0092353 Copb2 protein_coding protein_coding MGP_WSBEiJ_T0092354.1 MGP_WSBEiJ_G0034271.1 mouse_genomes_project 9 98833141 98834406 + Copb2 protein_coding retained_intron MGP_WSBEiJ_T0092355.1 MGP_WSBEiJ_G0034271.1 mouse_genomes_project 9 98840011 98840996 + Copb2 protein_coding retained_intron MGP_WSBEiJ_T0092356.1 MGP_WSBEiJ_G0034271.1 mouse_genomes_project 9 98840512 98841198 + Copb2 protein_coding retained_intron MGP_WSBEiJ_T0092357.1 MGP_WSBEiJ_G0034271.1 mouse_genomes_project 9 98840713 98841428 + Copb2 protein_coding retained_intron MGP_WSBEiJ_T0005481.1 MGP_WSBEiJ_G0004620.1 mouse_genomes_project 9 122591915 122598262 - 4930593C16Rik antisense antisense MGP_WSBEiJ_T0091667.1 MGP_WSBEiJ_G0034125.1 mouse_genomes_project 9 70820995 70827395 - MGP_WSBEiJ_P0091667 Polr2m protein_coding protein_coding MGP_WSBEiJ_T0091668.1 MGP_WSBEiJ_G0034125.1 mouse_genomes_project 9 70823070 70827509 - MGP_WSBEiJ_P0091668 Polr2m protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090838.1 MGP_WSBEiJ_G0033889.1 mouse_genomes_project 9 47683792 47753536 + MGP_WSBEiJ_P0090838 Drd2 protein_coding protein_coding MGP_WSBEiJ_T0010916.1 MGP_WSBEiJ_G0009073.1 mouse_genomes_project 9 111919512 111919589 + Gm24269 miRNA miRNA MGP_WSBEiJ_T0091373.1 MGP_WSBEiJ_G0034049.1 mouse_genomes_project 9 62570311 62686746 - MGP_WSBEiJ_P0091373 Smad3 protein_coding protein_coding MGP_WSBEiJ_T0091374.1 MGP_WSBEiJ_G0034049.1 mouse_genomes_project 9 62578313 62590090 - MGP_WSBEiJ_P0091374 Smad3 protein_coding protein_coding MGP_WSBEiJ_T0091375.1 MGP_WSBEiJ_G0034049.1 mouse_genomes_project 9 62578341 62638913 - MGP_WSBEiJ_P0091375 Smad3 protein_coding protein_coding MGP_WSBEiJ_T0091376.1 MGP_WSBEiJ_G0034049.1 mouse_genomes_project 9 62589690 62679832 - MGP_WSBEiJ_P0091376 Smad3 protein_coding protein_coding MGP_WSBEiJ_T0091377.1 MGP_WSBEiJ_G0034049.1 mouse_genomes_project 9 62591355 62670954 - Smad3 protein_coding processed_transcript MGP_WSBEiJ_T0090530.1 MGP_WSBEiJ_G0033788.1 mouse_genomes_project 9 38701355 38706018 + protein_coding retained_intron MGP_WSBEiJ_T0092245.1 MGP_WSBEiJ_G0034253.1 mouse_genomes_project 9 95841395 95890443 - MGP_WSBEiJ_P0092245 Trpc1 protein_coding protein_coding MGP_WSBEiJ_T0092246.1 MGP_WSBEiJ_G0034253.1 mouse_genomes_project 9 95842940 95890443 - MGP_WSBEiJ_P0092246 Trpc1 protein_coding protein_coding MGP_WSBEiJ_T0092247.1 MGP_WSBEiJ_G0034253.1 mouse_genomes_project 9 95842940 95890443 - MGP_WSBEiJ_P0092247 Trpc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092248.1 MGP_WSBEiJ_G0034253.1 mouse_genomes_project 9 95842940 95890443 - MGP_WSBEiJ_P0092248 Trpc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092249.1 MGP_WSBEiJ_G0034253.1 mouse_genomes_project 9 95852150 95855258 - Trpc1 protein_coding retained_intron MGP_WSBEiJ_T0092250.1 MGP_WSBEiJ_G0034253.1 mouse_genomes_project 9 95857844 95868532 - MGP_WSBEiJ_P0092250 Trpc1 protein_coding protein_coding MGP_WSBEiJ_T0092251.1 MGP_WSBEiJ_G0034253.1 mouse_genomes_project 9 95889122 95890460 - Trpc1 protein_coding retained_intron MGP_WSBEiJ_T0090915.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49230213 49248973 + Ppp2r1b protein_coding processed_transcript MGP_WSBEiJ_T0090916.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49242709 49281723 + MGP_WSBEiJ_P0090916 Ppp2r1b protein_coding protein_coding MGP_WSBEiJ_T0090917.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49242709 49280291 + MGP_WSBEiJ_P0090917 Ppp2r1b protein_coding protein_coding MGP_WSBEiJ_T0090918.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49242722 49268925 + MGP_WSBEiJ_P0090918 Ppp2r1b protein_coding protein_coding MGP_WSBEiJ_T0090919.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49242742 49267581 + MGP_WSBEiJ_P0090919 Ppp2r1b protein_coding protein_coding MGP_WSBEiJ_T0090920.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49242748 49280298 + MGP_WSBEiJ_P0090920 Ppp2r1b protein_coding protein_coding MGP_WSBEiJ_T0090921.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49242749 49280291 + MGP_WSBEiJ_P0090921 Ppp2r1b protein_coding protein_coding MGP_WSBEiJ_T0090922.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49242751 49267428 + MGP_WSBEiJ_P0090922 Ppp2r1b protein_coding protein_coding MGP_WSBEiJ_T0090923.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49242764 49267901 + MGP_WSBEiJ_P0090923 Ppp2r1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090924.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49257066 49267523 + MGP_WSBEiJ_P0090924 Ppp2r1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090925.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49260606 49265556 + Ppp2r1b protein_coding processed_transcript MGP_WSBEiJ_T0090926.1 MGP_WSBEiJ_G0033911.1 mouse_genomes_project 9 49265578 49266630 + Ppp2r1b protein_coding retained_intron MGP_WSBEiJ_T0089812.1 MGP_WSBEiJ_G0033478.1 mouse_genomes_project 9 11461382 11472367 - MGP_WSBEiJ_P0089812 Piwil4 protein_coding protein_coding MGP_WSBEiJ_T0089813.1 MGP_WSBEiJ_G0033478.1 mouse_genomes_project 9 11469055 11508915 - MGP_WSBEiJ_P0089813 Piwil4 protein_coding protein_coding MGP_WSBEiJ_T0089814.1 MGP_WSBEiJ_G0033478.1 mouse_genomes_project 9 11469056 11485762 - MGP_WSBEiJ_P0089814 Piwil4 protein_coding protein_coding MGP_WSBEiJ_T0089815.1 MGP_WSBEiJ_G0033478.1 mouse_genomes_project 9 11469650 11508927 - MGP_WSBEiJ_P0089815 Piwil4 protein_coding protein_coding MGP_WSBEiJ_T0090602.1 MGP_WSBEiJ_G0033812.1 mouse_genomes_project 9 42221788 42314366 - MGP_WSBEiJ_P0090602 Cbl protein_coding protein_coding MGP_WSBEiJ_T0090603.1 MGP_WSBEiJ_G0033812.1 mouse_genomes_project 9 42230988 42314361 - MGP_WSBEiJ_P0090603 Cbl protein_coding protein_coding MGP_WSBEiJ_T0090604.1 MGP_WSBEiJ_G0033812.1 mouse_genomes_project 9 42232624 42233824 - MGP_WSBEiJ_P0090604 Cbl protein_coding protein_coding MGP_WSBEiJ_T0090605.1 MGP_WSBEiJ_G0033812.1 mouse_genomes_project 9 42233183 42233797 - Cbl protein_coding retained_intron MGP_WSBEiJ_T0090606.1 MGP_WSBEiJ_G0033812.1 mouse_genomes_project 9 42233343 42236658 - Cbl protein_coding retained_intron MGP_WSBEiJ_T0090607.1 MGP_WSBEiJ_G0033812.1 mouse_genomes_project 9 42240199 42245590 - MGP_WSBEiJ_P0090607 Cbl protein_coding protein_coding MGP_WSBEiJ_T0090608.1 MGP_WSBEiJ_G0033812.1 mouse_genomes_project 9 42250483 42268383 - Cbl protein_coding processed_transcript MGP_WSBEiJ_T0090609.1 MGP_WSBEiJ_G0033812.1 mouse_genomes_project 9 42254836 42313921 - MGP_WSBEiJ_P0090609 Cbl protein_coding protein_coding MGP_WSBEiJ_T0091155.1 MGP_WSBEiJ_G0033995.1 mouse_genomes_project 9 56368579 56386056 - MGP_WSBEiJ_P0091155 Clk3 protein_coding protein_coding MGP_WSBEiJ_T0090710.1 MGP_WSBEiJ_G0033846.1 mouse_genomes_project 9 43200427 43222665 + MGP_WSBEiJ_P0090710 Mpzl3 protein_coding protein_coding MGP_WSBEiJ_T0090711.1 MGP_WSBEiJ_G0033846.1 mouse_genomes_project 9 43200429 43210413 + Mpzl3 protein_coding retained_intron MGP_WSBEiJ_T0090712.1 MGP_WSBEiJ_G0033846.1 mouse_genomes_project 9 43200450 43211706 + MGP_WSBEiJ_P0090712 Mpzl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090713.1 MGP_WSBEiJ_G0033846.1 mouse_genomes_project 9 43204492 43210897 + Mpzl3 protein_coding retained_intron MGP_WSBEiJ_T0090714.1 MGP_WSBEiJ_G0033846.1 mouse_genomes_project 9 43215843 43220389 + Mpzl3 protein_coding retained_intron MGP_WSBEiJ_T0099886.1 MGP_WSBEiJ_G0038549.1 mouse_genomes_project 9 107836702 107836832 + Gm23595 snoRNA snoRNA MGP_WSBEiJ_T0090062.1 MGP_WSBEiJ_G0033577.1 mouse_genomes_project 9 18518723 18521972 + MGP_WSBEiJ_P0090062 1810026J23Rik protein_coding protein_coding MGP_WSBEiJ_T0015534.1 MGP_WSBEiJ_G0013664.1 mouse_genomes_project 9 58195415 58195890 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091938.1 MGP_WSBEiJ_G0034187.1 mouse_genomes_project 9 78182347 78184444 - MGP_WSBEiJ_P0091938 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0090707.1 MGP_WSBEiJ_G0033843.1 mouse_genomes_project 9 43121395 43127687 + MGP_WSBEiJ_P0090707 Cd3d protein_coding protein_coding MGP_WSBEiJ_T0090405.1 MGP_WSBEiJ_G0033697.1 mouse_genomes_project 9 35483999 35485050 + MGP_WSBEiJ_P0090405 Olfr145 protein_coding protein_coding MGP_WSBEiJ_T0015570.1 MGP_WSBEiJ_G0013700.1 mouse_genomes_project 9 80796262 80797133 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097479.1 MGP_WSBEiJ_G0036147.1 mouse_genomes_project 9 88395088 88397241 - Gm28229 sense_intronic sense_intronic MGP_WSBEiJ_T0009134.1 MGP_WSBEiJ_G0007350.1 mouse_genomes_project 9 83040795 83055602 - Gm27216 lincRNA lincRNA MGP_WSBEiJ_T0009135.1 MGP_WSBEiJ_G0007350.1 mouse_genomes_project 9 83040805 83056120 - Gm27216 lincRNA lincRNA MGP_WSBEiJ_T0009136.1 MGP_WSBEiJ_G0007350.1 mouse_genomes_project 9 83040822 83056067 - Gm27216 lincRNA lincRNA MGP_WSBEiJ_T0098620.1 MGP_WSBEiJ_G0037283.1 mouse_genomes_project 9 73824075 73824190 + Gm24141 snRNA snRNA MGP_WSBEiJ_T0002331.1 MGP_WSBEiJ_G0002248.1 mouse_genomes_project 9 71984999 71986781 + TEC TEC MGP_WSBEiJ_T0093653.1 MGP_WSBEiJ_G0034501.1 mouse_genomes_project 9 115975630 116017840 + MGP_WSBEiJ_P0093653 Dync1li1 protein_coding protein_coding MGP_WSBEiJ_T0009138.1 MGP_WSBEiJ_G0007352.1 mouse_genomes_project 9 84636937 84650763 + 4930554C24Rik lincRNA lincRNA MGP_WSBEiJ_T0092118.1 MGP_WSBEiJ_G0034222.1 mouse_genomes_project 9 88270611 88318306 + MGP_WSBEiJ_P0092118 Nt5e protein_coding protein_coding MGP_WSBEiJ_T0092119.1 MGP_WSBEiJ_G0034222.1 mouse_genomes_project 9 88271033 88274619 + Nt5e protein_coding retained_intron MGP_WSBEiJ_T0092120.1 MGP_WSBEiJ_G0034222.1 mouse_genomes_project 9 88271048 88314033 + Nt5e protein_coding retained_intron MGP_WSBEiJ_T0015501.1 MGP_WSBEiJ_G0013631.1 mouse_genomes_project 9 9653399 9654384 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090747.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44052427 44097047 - MGP_WSBEiJ_P0090747 Rnf214 protein_coding protein_coding MGP_WSBEiJ_T0090748.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44052693 44097055 - MGP_WSBEiJ_P0090748 Rnf214 protein_coding protein_coding MGP_WSBEiJ_T0090749.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44052693 44096585 - MGP_WSBEiJ_P0090749 Rnf214 protein_coding protein_coding MGP_WSBEiJ_T0090750.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44053292 44096551 - Rnf214 protein_coding retained_intron MGP_WSBEiJ_T0090751.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44053301 44097039 - MGP_WSBEiJ_P0090751 Rnf214 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090752.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44053836 44097072 - MGP_WSBEiJ_P0090752 Rnf214 protein_coding protein_coding MGP_WSBEiJ_T0090753.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44060305 44060987 - Rnf214 protein_coding retained_intron MGP_WSBEiJ_T0090754.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44079205 44088928 - Rnf214 protein_coding retained_intron MGP_WSBEiJ_T0090755.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44079500 44096565 - MGP_WSBEiJ_P0090755 Rnf214 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090756.1 MGP_WSBEiJ_G0033860.1 mouse_genomes_project 9 44086485 44090363 - Rnf214 protein_coding retained_intron MGP_WSBEiJ_T0097125.1 MGP_WSBEiJ_G0035806.1 mouse_genomes_project 9 62995615 62995710 + Gm25606 rRNA rRNA MGP_WSBEiJ_T0002414.1 MGP_WSBEiJ_G0002330.1 mouse_genomes_project 9 108912300 108913119 - TEC TEC MGP_WSBEiJ_T0089771.1 MGP_WSBEiJ_G0033467.1 mouse_genomes_project 9 10052127 10094323 + MGP_WSBEiJ_P0089771 Ccdc82 protein_coding protein_coding MGP_WSBEiJ_T0089772.1 MGP_WSBEiJ_G0033467.1 mouse_genomes_project 9 10052140 10058699 + MGP_WSBEiJ_P0089772 Ccdc82 protein_coding protein_coding MGP_WSBEiJ_T0017912.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39309101 39536315 + processed_transcript lincRNA MGP_WSBEiJ_T0017913.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39309230 39432262 + processed_transcript lincRNA MGP_WSBEiJ_T0017914.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39309265 39369540 + processed_transcript lincRNA MGP_WSBEiJ_T0017915.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39417235 39536772 + processed_transcript lincRNA MGP_WSBEiJ_T0017916.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39417343 39562513 + processed_transcript lincRNA MGP_WSBEiJ_T0017917.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39525920 39539124 + processed_transcript lincRNA MGP_WSBEiJ_T0017918.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39526401 39539127 + processed_transcript lincRNA MGP_WSBEiJ_T0017919.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39527122 39539125 + processed_transcript processed_transcript MGP_WSBEiJ_T0017920.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39527653 39560093 + processed_transcript lincRNA MGP_WSBEiJ_T0017921.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39527667 39562317 + processed_transcript lincRNA MGP_WSBEiJ_T0017922.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39527739 39538784 + processed_transcript lincRNA MGP_WSBEiJ_T0017923.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39534791 39539035 + processed_transcript retained_intron MGP_WSBEiJ_T0017924.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39547871 39560059 + processed_transcript lincRNA MGP_WSBEiJ_T0017925.1 MGP_WSBEiJ_G0015155.1 mouse_genomes_project 9 39561564 39565098 + processed_transcript retained_intron MGP_WSBEiJ_T0090876.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49042871 49079872 - MGP_WSBEiJ_P0090876 Dixdc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090877.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49042874 49110211 - MGP_WSBEiJ_P0090877 Dixdc1 protein_coding protein_coding MGP_WSBEiJ_T0090878.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49042878 49080654 - Dixdc1 protein_coding retained_intron MGP_WSBEiJ_T0090879.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49042878 49110303 - MGP_WSBEiJ_P0090879 Dixdc1 protein_coding protein_coding MGP_WSBEiJ_T0090880.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49046317 49078050 - Dixdc1 protein_coding processed_transcript MGP_WSBEiJ_T0090881.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49046317 49122538 - MGP_WSBEiJ_P0090881 Dixdc1 protein_coding protein_coding MGP_WSBEiJ_T0090882.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49046381 49065437 - Dixdc1 protein_coding retained_intron MGP_WSBEiJ_T0090883.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49057814 49075091 - MGP_WSBEiJ_P0090883 Dixdc1 protein_coding protein_coding MGP_WSBEiJ_T0090884.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49070973 49080661 - Dixdc1 protein_coding processed_transcript MGP_WSBEiJ_T0090885.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49074759 49079927 - Dixdc1 protein_coding retained_intron MGP_WSBEiJ_T0090886.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49074937 49079063 - Dixdc1 protein_coding processed_transcript MGP_WSBEiJ_T0090887.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49091850 49122468 - MGP_WSBEiJ_P0090887 Dixdc1 protein_coding protein_coding MGP_WSBEiJ_T0090888.1 MGP_WSBEiJ_G0033904.1 mouse_genomes_project 9 49092353 49110174 - MGP_WSBEiJ_P0090888 Dixdc1 protein_coding protein_coding MGP_WSBEiJ_T0090384.1 MGP_WSBEiJ_G0033685.1 mouse_genomes_project 9 35044023 35082943 + MGP_WSBEiJ_P0090384 Msantd2 protein_coding protein_coding MGP_WSBEiJ_T0005391.1 MGP_WSBEiJ_G0004556.1 mouse_genomes_project 9 69238572 69240141 - Gm28731 antisense antisense MGP_WSBEiJ_T0009113.1 MGP_WSBEiJ_G0007331.1 mouse_genomes_project 9 68993467 69072980 + B230323A14Rik lincRNA lincRNA MGP_WSBEiJ_T0009114.1 MGP_WSBEiJ_G0007331.1 mouse_genomes_project 9 68995899 69072335 + B230323A14Rik lincRNA lincRNA MGP_WSBEiJ_T0009162.1 MGP_WSBEiJ_G0007369.1 mouse_genomes_project 9 98430966 98431593 - 2610303G11Rik lincRNA lincRNA MGP_WSBEiJ_T0092330.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97287072 97324281 - MGP_WSBEiJ_P0092330 Slc25a36 protein_coding protein_coding MGP_WSBEiJ_T0092331.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97287676 97296586 - MGP_WSBEiJ_P0092331 Slc25a36 protein_coding protein_coding MGP_WSBEiJ_T0092332.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97291028 97324131 - MGP_WSBEiJ_P0092332 Slc25a36 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092333.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97291314 97297368 - Slc25a36 protein_coding retained_intron MGP_WSBEiJ_T0092334.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97292514 97302141 - Slc25a36 protein_coding processed_transcript MGP_WSBEiJ_T0092335.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97292680 97302258 - Slc25a36 protein_coding processed_transcript MGP_WSBEiJ_T0092336.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97301815 97312367 - MGP_WSBEiJ_P0092336 Slc25a36 protein_coding protein_coding MGP_WSBEiJ_T0092337.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97304956 97324111 - Slc25a36 protein_coding retained_intron MGP_WSBEiJ_T0092338.1 MGP_WSBEiJ_G0034265.1 mouse_genomes_project 9 97311450 97324157 - Slc25a36 protein_coding retained_intron MGP_WSBEiJ_T0010857.1 MGP_WSBEiJ_G0009014.1 mouse_genomes_project 9 16902719 16902786 + Gm26231 miRNA miRNA MGP_WSBEiJ_T0091663.1 MGP_WSBEiJ_G0034124.1 mouse_genomes_project 9 70820923 70937968 - MGP_WSBEiJ_P0091663 Gcom1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091664.1 MGP_WSBEiJ_G0034124.1 mouse_genomes_project 9 70820923 70937968 - MGP_WSBEiJ_P0091664 Gcom1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091665.1 MGP_WSBEiJ_G0034124.1 mouse_genomes_project 9 70820923 70937968 - MGP_WSBEiJ_P0091665 Gcom1 protein_coding protein_coding MGP_WSBEiJ_T0091666.1 MGP_WSBEiJ_G0034124.1 mouse_genomes_project 9 70820923 70937968 - MGP_WSBEiJ_P0091666 Gcom1 protein_coding protein_coding MGP_WSBEiJ_T0002424.1 MGP_WSBEiJ_G0002340.1 mouse_genomes_project 9 111328272 111331654 - TEC TEC MGP_WSBEiJ_T0090819.1 MGP_WSBEiJ_G0033880.1 mouse_genomes_project 9 46801453 46802073 + MGP_WSBEiJ_P0090819 Gm5617 protein_coding protein_coding MGP_WSBEiJ_T0015561.1 MGP_WSBEiJ_G0013691.1 mouse_genomes_project 9 76444464 76444762 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098629.1 MGP_WSBEiJ_G0037292.1 mouse_genomes_project 9 90330569 90330746 + Gm22866 snRNA snRNA MGP_WSBEiJ_T0099884.1 MGP_WSBEiJ_G0038547.1 mouse_genomes_project 9 103483290 103483423 - Gm22595 snoRNA snoRNA MGP_WSBEiJ_T0098621.1 MGP_WSBEiJ_G0037284.1 mouse_genomes_project 9 75496716 75496800 - Gm25300 snRNA snRNA MGP_WSBEiJ_T0009146.1 MGP_WSBEiJ_G0007358.1 mouse_genomes_project 9 91360519 91363781 + Gm28652 lincRNA lincRNA MGP_WSBEiJ_T0015528.1 MGP_WSBEiJ_G0013658.1 mouse_genomes_project 9 43415378 43415614 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015592.1 MGP_WSBEiJ_G0013722.1 mouse_genomes_project 9 90899492 90899784 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089972.1 MGP_WSBEiJ_G0033545.1 mouse_genomes_project 9 17641867 17686691 - MGP_WSBEiJ_P0089972 Col5a3 protein_coding protein_coding MGP_WSBEiJ_T0089973.1 MGP_WSBEiJ_G0033545.1 mouse_genomes_project 9 17654410 17686691 - Col5a3 protein_coding retained_intron MGP_WSBEiJ_T0090942.1 MGP_WSBEiJ_G0033919.1 mouse_genomes_project 9 50183897 50208280 + Arhgap20 protein_coding retained_intron MGP_WSBEiJ_T0090943.1 MGP_WSBEiJ_G0033919.1 mouse_genomes_project 9 50183905 50245006 + Arhgap20 protein_coding retained_intron MGP_WSBEiJ_T0090944.1 MGP_WSBEiJ_G0033919.1 mouse_genomes_project 9 50183912 50273117 + MGP_WSBEiJ_P0090944 Arhgap20 protein_coding protein_coding MGP_WSBEiJ_T0090945.1 MGP_WSBEiJ_G0033919.1 mouse_genomes_project 9 50184136 50273126 + MGP_WSBEiJ_P0090945 Arhgap20 protein_coding protein_coding MGP_WSBEiJ_T0090946.1 MGP_WSBEiJ_G0033919.1 mouse_genomes_project 9 50233838 50248689 + Arhgap20 protein_coding processed_transcript MGP_WSBEiJ_T0090947.1 MGP_WSBEiJ_G0033919.1 mouse_genomes_project 9 50251064 50267908 + Arhgap20 protein_coding processed_transcript MGP_WSBEiJ_T0002344.1 MGP_WSBEiJ_G0002261.1 mouse_genomes_project 9 75590174 75594253 + TEC TEC MGP_WSBEiJ_T0009060.1 MGP_WSBEiJ_G0007287.1 mouse_genomes_project 9 17922097 17925590 - Gm26592 lincRNA lincRNA MGP_WSBEiJ_T0092146.1 MGP_WSBEiJ_G0034227.1 mouse_genomes_project 9 88679154 88684829 - MGP_WSBEiJ_P0092146 protein_coding protein_coding MGP_WSBEiJ_T0091441.1 MGP_WSBEiJ_G0034066.1 mouse_genomes_project 9 64106861 64146305 + MGP_WSBEiJ_P0091441 Igdcc4 protein_coding protein_coding MGP_WSBEiJ_T0091442.1 MGP_WSBEiJ_G0034066.1 mouse_genomes_project 9 64106910 64143929 + MGP_WSBEiJ_P0091442 Igdcc4 protein_coding protein_coding MGP_WSBEiJ_T0091844.1 MGP_WSBEiJ_G0034157.1 mouse_genomes_project 9 74990957 75056527 - MGP_WSBEiJ_P0091844 Tmod3 protein_coding protein_coding MGP_WSBEiJ_T0002309.1 MGP_WSBEiJ_G0002226.1 mouse_genomes_project 9 30314761 30316115 + TEC TEC MGP_WSBEiJ_T0092128.1 MGP_WSBEiJ_G0034224.1 mouse_genomes_project 9 88357478 88410185 - MGP_WSBEiJ_P0092128 Gm20537 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092130.1 MGP_WSBEiJ_G0034224.1 mouse_genomes_project 9 88372998 88410070 - MGP_WSBEiJ_P0092130 Gm20537 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002345.1 MGP_WSBEiJ_G0002262.1 mouse_genomes_project 9 76323280 76326551 + TEC TEC MGP_WSBEiJ_T0002335.1 MGP_WSBEiJ_G0002252.1 mouse_genomes_project 9 72128236 72130983 + TEC TEC MGP_WSBEiJ_T0098610.1 MGP_WSBEiJ_G0037273.1 mouse_genomes_project 9 66097598 66097696 - Gm24225 snRNA snRNA MGP_WSBEiJ_T0091743.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72060170 72149792 + MGP_WSBEiJ_P0091743 Nedd4 protein_coding protein_coding MGP_WSBEiJ_T0091744.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72060262 72070696 + Nedd4 protein_coding retained_intron MGP_WSBEiJ_T0091745.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72060306 72120883 + MGP_WSBEiJ_P0091745 Nedd4 protein_coding protein_coding MGP_WSBEiJ_T0091746.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72060311 72111436 + MGP_WSBEiJ_P0091746 Nedd4 protein_coding protein_coding MGP_WSBEiJ_T0091747.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72060314 72062018 + Nedd4 protein_coding processed_transcript MGP_WSBEiJ_T0091748.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72067274 72070677 + Nedd4 protein_coding retained_intron MGP_WSBEiJ_T0091749.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72067285 72120448 + MGP_WSBEiJ_P0091749 Nedd4 protein_coding protein_coding MGP_WSBEiJ_T0091750.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72139401 72148098 + MGP_WSBEiJ_P0091750 Nedd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091751.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72141373 72147093 + Nedd4 protein_coding retained_intron MGP_WSBEiJ_T0091752.1 MGP_WSBEiJ_G0034133.1 mouse_genomes_project 9 72145778 72147203 + Nedd4 protein_coding retained_intron MGP_WSBEiJ_T0093527.1 MGP_WSBEiJ_G0034474.1 mouse_genomes_project 9 111870992 111873845 + Als2cl protein_coding processed_transcript MGP_WSBEiJ_T0093528.1 MGP_WSBEiJ_G0034474.1 mouse_genomes_project 9 111871296 111893063 + MGP_WSBEiJ_P0093528 Als2cl protein_coding protein_coding MGP_WSBEiJ_T0093529.1 MGP_WSBEiJ_G0034474.1 mouse_genomes_project 9 111871328 111893069 + MGP_WSBEiJ_P0093529 Als2cl protein_coding protein_coding MGP_WSBEiJ_T0093530.1 MGP_WSBEiJ_G0034474.1 mouse_genomes_project 9 111871355 111876016 + MGP_WSBEiJ_P0093530 Als2cl protein_coding protein_coding MGP_WSBEiJ_T0093531.1 MGP_WSBEiJ_G0034474.1 mouse_genomes_project 9 111871459 111893066 + MGP_WSBEiJ_P0093531 Als2cl protein_coding protein_coding MGP_WSBEiJ_T0093532.1 MGP_WSBEiJ_G0034474.1 mouse_genomes_project 9 111876883 111878424 + Als2cl protein_coding retained_intron MGP_WSBEiJ_T0093533.1 MGP_WSBEiJ_G0034474.1 mouse_genomes_project 9 111877424 111881249 + Als2cl protein_coding retained_intron MGP_WSBEiJ_T0093534.1 MGP_WSBEiJ_G0034474.1 mouse_genomes_project 9 111879092 111893067 + Als2cl protein_coding processed_transcript MGP_WSBEiJ_T0093593.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119341 113248284 - MGP_WSBEiJ_P0093593 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093594.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119341 113246496 - MGP_WSBEiJ_P0093594 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093595.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119341 113248284 - MGP_WSBEiJ_P0093595 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093596.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119341 113246268 - MGP_WSBEiJ_P0093596 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093597.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119484 113246311 - MGP_WSBEiJ_P0093597 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093598.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119486 113296101 - Arpp21 protein_coding retained_intron MGP_WSBEiJ_T0093599.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119508 113296694 - MGP_WSBEiJ_P0093599 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093600.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119510 113294188 - MGP_WSBEiJ_P0093600 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093601.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113119987 113248165 - MGP_WSBEiJ_P0093601 Arpp21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093602.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113174156 113279044 - MGP_WSBEiJ_P0093602 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093603.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113214520 113296519 - Arpp21 protein_coding retained_intron MGP_WSBEiJ_T0093604.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113215533 113296694 - MGP_WSBEiJ_P0093604 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093605.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113220721 113279134 - MGP_WSBEiJ_P0093605 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093606.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113235342 113295302 - Arpp21 protein_coding retained_intron MGP_WSBEiJ_T0093607.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113238819 113279109 - MGP_WSBEiJ_P0093607 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093608.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113238865 113279109 - MGP_WSBEiJ_P0093608 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093609.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113238903 113295492 - MGP_WSBEiJ_P0093609 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093610.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113239781 113248444 - MGP_WSBEiJ_P0093610 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093611.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113239781 113248447 - MGP_WSBEiJ_P0093611 Arpp21 protein_coding protein_coding MGP_WSBEiJ_T0093612.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113240721 113248422 - Arpp21 protein_coding retained_intron MGP_WSBEiJ_T0093613.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113240727 113248467 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093614.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113240756 113248444 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093615.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113242403 113248398 - Arpp21 protein_coding retained_intron MGP_WSBEiJ_T0093616.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113242433 113246640 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093617.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113242476 113246496 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093618.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113242730 113246483 - Arpp21 protein_coding retained_intron MGP_WSBEiJ_T0093619.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113246276 113293589 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093620.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113248109 113295549 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093621.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113248146 113297614 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093622.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113248179 113248958 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093623.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113248447 113248992 - Arpp21 protein_coding processed_transcript MGP_WSBEiJ_T0093624.1 MGP_WSBEiJ_G0034487.1 mouse_genomes_project 9 113266977 113279087 - Arpp21 protein_coding retained_intron MGP_WSBEiJ_T0093806.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122629841 122775907 - Ulk4 protein_coding processed_transcript MGP_WSBEiJ_T0093807.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122634042 122710111 - Ulk4 protein_coding retained_intron MGP_WSBEiJ_T0093808.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122634042 122931229 - MGP_WSBEiJ_P0093808 Ulk4 protein_coding protein_coding MGP_WSBEiJ_T0093809.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122635990 122931202 - MGP_WSBEiJ_P0093809 Ulk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093810.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122741998 122931213 - MGP_WSBEiJ_P0093810 Ulk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093811.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122742002 122931204 - MGP_WSBEiJ_P0093811 Ulk4 protein_coding protein_coding MGP_WSBEiJ_T0093812.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122770058 122931229 - Ulk4 protein_coding retained_intron MGP_WSBEiJ_T0093813.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122826555 122910277 - MGP_WSBEiJ_P0093813 Ulk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093814.1 MGP_WSBEiJ_G0034549.1 mouse_genomes_project 9 122830063 122858712 - Ulk4 protein_coding processed_transcript MGP_WSBEiJ_T0093013.1 MGP_WSBEiJ_G0034392.1 mouse_genomes_project 9 108685789 108697663 + Gm20661 protein_coding retained_intron MGP_WSBEiJ_T0093014.1 MGP_WSBEiJ_G0034392.1 mouse_genomes_project 9 108685824 108696698 + Gm20661 protein_coding retained_intron MGP_WSBEiJ_T0093015.1 MGP_WSBEiJ_G0034392.1 mouse_genomes_project 9 108686018 108697218 + MGP_WSBEiJ_P0093015 Gm20661 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098626.1 MGP_WSBEiJ_G0037289.1 mouse_genomes_project 9 86637388 86637502 - Gm25949 snRNA snRNA MGP_WSBEiJ_T0015540.1 MGP_WSBEiJ_G0013670.1 mouse_genomes_project 9 64897732 64898249 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091075.1 MGP_WSBEiJ_G0033964.1 mouse_genomes_project 9 54611480 54652713 + MGP_WSBEiJ_P0091075 Pstpip1 protein_coding protein_coding MGP_WSBEiJ_T0091076.1 MGP_WSBEiJ_G0033964.1 mouse_genomes_project 9 54611494 54652701 + Pstpip1 protein_coding retained_intron MGP_WSBEiJ_T0091077.1 MGP_WSBEiJ_G0033964.1 mouse_genomes_project 9 54611494 54652697 + Pstpip1 protein_coding retained_intron MGP_WSBEiJ_T0091078.1 MGP_WSBEiJ_G0033964.1 mouse_genomes_project 9 54644256 54649918 + Pstpip1 protein_coding processed_transcript MGP_WSBEiJ_T0091079.1 MGP_WSBEiJ_G0033964.1 mouse_genomes_project 9 54646059 54647727 + Pstpip1 protein_coding retained_intron MGP_WSBEiJ_T0091080.1 MGP_WSBEiJ_G0033964.1 mouse_genomes_project 9 54647024 54649977 + Pstpip1 protein_coding retained_intron MGP_WSBEiJ_T0091081.1 MGP_WSBEiJ_G0033964.1 mouse_genomes_project 9 54647024 54648017 + Pstpip1 protein_coding retained_intron MGP_WSBEiJ_T0093016.1 MGP_WSBEiJ_G0034393.1 mouse_genomes_project 9 108686954 108688611 - MGP_WSBEiJ_P0093016 Fam212a protein_coding protein_coding MGP_WSBEiJ_T0093017.1 MGP_WSBEiJ_G0034393.1 mouse_genomes_project 9 108687364 108688364 - MGP_WSBEiJ_P0093017 Fam212a protein_coding protein_coding MGP_WSBEiJ_T0090256.1 MGP_WSBEiJ_G0033649.1 mouse_genomes_project 9 32577099 32593743 - MGP_WSBEiJ_P0090256 Tirap protein_coding protein_coding MGP_WSBEiJ_T0090257.1 MGP_WSBEiJ_G0033649.1 mouse_genomes_project 9 32579339 32593441 - MGP_WSBEiJ_P0090257 Tirap protein_coding protein_coding MGP_WSBEiJ_T0090258.1 MGP_WSBEiJ_G0033649.1 mouse_genomes_project 9 32579339 32593381 - MGP_WSBEiJ_P0090258 Tirap protein_coding protein_coding MGP_WSBEiJ_T0090259.1 MGP_WSBEiJ_G0033649.1 mouse_genomes_project 9 32579835 32593423 - MGP_WSBEiJ_P0090259 Tirap protein_coding protein_coding MGP_WSBEiJ_T0090260.1 MGP_WSBEiJ_G0033649.1 mouse_genomes_project 9 32581220 32593336 - MGP_WSBEiJ_P0090260 Tirap protein_coding protein_coding MGP_WSBEiJ_T0090261.1 MGP_WSBEiJ_G0033649.1 mouse_genomes_project 9 32581517 32583891 - MGP_WSBEiJ_P0090261 Tirap protein_coding protein_coding MGP_WSBEiJ_T0090262.1 MGP_WSBEiJ_G0033649.1 mouse_genomes_project 9 32583527 32592952 - MGP_WSBEiJ_P0090262 Tirap protein_coding protein_coding MGP_WSBEiJ_T0089756.1 MGP_WSBEiJ_G0033461.1 mouse_genomes_project 9 5381639 5506411 + MGP_WSBEiJ_P0089756 Trpc6 protein_coding protein_coding MGP_WSBEiJ_T0005355.1 MGP_WSBEiJ_G0004534.1 mouse_genomes_project 9 43322551 43324716 + Gm17099 antisense antisense MGP_WSBEiJ_T0093375.1 MGP_WSBEiJ_G0034450.1 mouse_genomes_project 9 110793252 110811491 + MGP_WSBEiJ_P0093375 Cdc25a protein_coding protein_coding MGP_WSBEiJ_T0093376.1 MGP_WSBEiJ_G0034450.1 mouse_genomes_project 9 110793613 110799154 + MGP_WSBEiJ_P0093376 Cdc25a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093377.1 MGP_WSBEiJ_G0034450.1 mouse_genomes_project 9 110793979 110810244 + MGP_WSBEiJ_P0093377 Cdc25a protein_coding protein_coding MGP_WSBEiJ_T0093379.1 MGP_WSBEiJ_G0034450.1 mouse_genomes_project 9 110801926 110807597 + Cdc25a protein_coding retained_intron MGP_WSBEiJ_T0093380.1 MGP_WSBEiJ_G0034450.1 mouse_genomes_project 9 110805312 110809964 + Cdc25a protein_coding retained_intron MGP_WSBEiJ_T0093381.1 MGP_WSBEiJ_G0034450.1 mouse_genomes_project 9 110806432 110806967 + Cdc25a protein_coding retained_intron MGP_WSBEiJ_T0091168.1 MGP_WSBEiJ_G0033999.1 mouse_genomes_project 9 56647954 56664411 + MGP_WSBEiJ_P0091168 Cyp11a1 protein_coding protein_coding MGP_WSBEiJ_T0091169.1 MGP_WSBEiJ_G0033999.1 mouse_genomes_project 9 56656099 56671309 + MGP_WSBEiJ_P0091169 Cyp11a1 protein_coding protein_coding MGP_WSBEiJ_T0091170.1 MGP_WSBEiJ_G0033999.1 mouse_genomes_project 9 56656425 56666055 + Cyp11a1 protein_coding retained_intron MGP_WSBEiJ_T0091171.1 MGP_WSBEiJ_G0033999.1 mouse_genomes_project 9 56661072 56669529 + MGP_WSBEiJ_P0091171 Cyp11a1 protein_coding protein_coding MGP_WSBEiJ_T0092358.1 MGP_WSBEiJ_G0034272.1 mouse_genomes_project 9 98841896 98854792 - MGP_WSBEiJ_P0092358 Mrps22 protein_coding protein_coding MGP_WSBEiJ_T0092359.1 MGP_WSBEiJ_G0034272.1 mouse_genomes_project 9 98848303 98854777 - Mrps22 protein_coding retained_intron MGP_WSBEiJ_T0002431.1 MGP_WSBEiJ_G0002347.1 mouse_genomes_project 9 123452063 123456459 - TEC TEC MGP_WSBEiJ_T0090689.1 MGP_WSBEiJ_G0033838.1 mouse_genomes_project 9 42928126 42931678 - MGP_WSBEiJ_P0090689 Ttc36 protein_coding protein_coding MGP_WSBEiJ_T0089970.1 MGP_WSBEiJ_G0033544.1 mouse_genomes_project 9 17526828 17593089 - MGP_WSBEiJ_P0089970 Olfm2 protein_coding protein_coding MGP_WSBEiJ_T0089971.1 MGP_WSBEiJ_G0033544.1 mouse_genomes_project 9 17526949 17591650 - MGP_WSBEiJ_P0089971 Olfm2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090115.1 MGP_WSBEiJ_G0033606.1 mouse_genomes_project 9 19463069 19482840 - MGP_WSBEiJ_P0090115 Rp9 protein_coding protein_coding MGP_WSBEiJ_T0092189.1 MGP_WSBEiJ_G0034238.1 mouse_genomes_project 9 90179551 90251511 - MGP_WSBEiJ_P0092189 Tbc1d2b protein_coding protein_coding MGP_WSBEiJ_T0092190.1 MGP_WSBEiJ_G0034238.1 mouse_genomes_project 9 90207672 90251546 - MGP_WSBEiJ_P0092190 Tbc1d2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092191.1 MGP_WSBEiJ_G0034238.1 mouse_genomes_project 9 90218019 90251513 - MGP_WSBEiJ_P0092191 Tbc1d2b protein_coding protein_coding MGP_WSBEiJ_T0092192.1 MGP_WSBEiJ_G0034238.1 mouse_genomes_project 9 90220895 90235605 - Tbc1d2b protein_coding processed_transcript MGP_WSBEiJ_T0091071.1 MGP_WSBEiJ_G0033963.1 mouse_genomes_project 9 54561176 54583522 + MGP_WSBEiJ_P0091071 Rcn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091072.1 MGP_WSBEiJ_G0033963.1 mouse_genomes_project 9 54561188 54580717 + MGP_WSBEiJ_P0091072 Rcn2 protein_coding protein_coding MGP_WSBEiJ_T0091073.1 MGP_WSBEiJ_G0033963.1 mouse_genomes_project 9 54561201 54563559 + Rcn2 protein_coding retained_intron MGP_WSBEiJ_T0091074.1 MGP_WSBEiJ_G0033963.1 mouse_genomes_project 9 54561216 54573567 + Rcn2 protein_coding retained_intron MGP_WSBEiJ_T0090110.1 MGP_WSBEiJ_G0033601.1 mouse_genomes_project 9 19210449 19228459 + MGP_WSBEiJ_P0090110 Zfp809 protein_coding protein_coding MGP_WSBEiJ_T0092398.1 MGP_WSBEiJ_G0034286.1 mouse_genomes_project 9 99895878 99905915 + MGP_WSBEiJ_P0092398 Dbr1 protein_coding protein_coding MGP_WSBEiJ_T0092399.1 MGP_WSBEiJ_G0034286.1 mouse_genomes_project 9 99895907 99903855 + MGP_WSBEiJ_P0092399 Dbr1 protein_coding protein_coding MGP_WSBEiJ_T0092400.1 MGP_WSBEiJ_G0034286.1 mouse_genomes_project 9 99896159 99903463 + MGP_WSBEiJ_P0092400 Dbr1 protein_coding protein_coding MGP_WSBEiJ_T0092401.1 MGP_WSBEiJ_G0034286.1 mouse_genomes_project 9 99896187 99903472 + MGP_WSBEiJ_P0092401 Dbr1 protein_coding protein_coding MGP_WSBEiJ_T0092402.1 MGP_WSBEiJ_G0034286.1 mouse_genomes_project 9 99901615 99905252 + MGP_WSBEiJ_P0092402 Dbr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092403.1 MGP_WSBEiJ_G0034286.1 mouse_genomes_project 9 99901710 99904103 + MGP_WSBEiJ_P0092403 Dbr1 protein_coding protein_coding MGP_WSBEiJ_T0091131.1 MGP_WSBEiJ_G0033978.1 mouse_genomes_project 9 55723925 55727184 - MGP_WSBEiJ_P0091131 Commd4 protein_coding protein_coding MGP_WSBEiJ_T0090481.1 MGP_WSBEiJ_G0033760.1 mouse_genomes_project 9 37496443 37497473 - MGP_WSBEiJ_P0090481 Olfr149 protein_coding protein_coding MGP_WSBEiJ_T0015541.1 MGP_WSBEiJ_G0013671.1 mouse_genomes_project 9 70166619 70167462 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002303.1 MGP_WSBEiJ_G0002220.1 mouse_genomes_project 9 21764858 21766712 - TEC TEC MGP_WSBEiJ_T0005359.1 MGP_WSBEiJ_G0004537.1 mouse_genomes_project 9 44444667 44445576 - Gm10680 antisense antisense MGP_WSBEiJ_T0010913.1 MGP_WSBEiJ_G0009070.1 mouse_genomes_project 9 110807239 110807307 + Mir7089 miRNA miRNA MGP_WSBEiJ_T0090446.1 MGP_WSBEiJ_G0033731.1 mouse_genomes_project 9 36397973 36401238 + MGP_WSBEiJ_P0090446 Olfr921 protein_coding protein_coding MGP_WSBEiJ_T0089680.1 MGP_WSBEiJ_G0033435.1 mouse_genomes_project 9 1054976 1083206 + MGP_WSBEiJ_P0089680 Kbtbd3 protein_coding protein_coding MGP_WSBEiJ_T0093648.1 MGP_WSBEiJ_G0034496.1 mouse_genomes_project 9 115664574 115677256 + MGP_WSBEiJ_P0093648 Tmppe protein_coding protein_coding MGP_WSBEiJ_T0099828.1 MGP_WSBEiJ_G0038491.1 mouse_genomes_project 9 12124235 12124368 + Gm22620 snoRNA snoRNA MGP_WSBEiJ_T0090059.1 MGP_WSBEiJ_G0033576.1 mouse_genomes_project 9 18514711 18518833 - MGP_WSBEiJ_P0090059 Yipf2 protein_coding protein_coding MGP_WSBEiJ_T0090060.1 MGP_WSBEiJ_G0033576.1 mouse_genomes_project 9 18514711 18518833 - MGP_WSBEiJ_P0090060 Yipf2 protein_coding protein_coding MGP_WSBEiJ_T0090061.1 MGP_WSBEiJ_G0033576.1 mouse_genomes_project 9 18514711 18518833 - MGP_WSBEiJ_P0090061 Yipf2 protein_coding protein_coding MGP_WSBEiJ_T0009082.1 MGP_WSBEiJ_G0007307.1 mouse_genomes_project 9 39122309 39144564 + lincRNA lincRNA MGP_WSBEiJ_T0090990.1 MGP_WSBEiJ_G0033938.1 mouse_genomes_project 9 52646208 52674785 - MGP_WSBEiJ_P0090990 Cyp19a1 protein_coding protein_coding MGP_WSBEiJ_T0010900.1 MGP_WSBEiJ_G0009057.1 mouse_genomes_project 9 102737686 102737738 - Mir7243 miRNA miRNA MGP_WSBEiJ_T0002362.1 MGP_WSBEiJ_G0002278.1 mouse_genomes_project 9 89209528 89213399 - TEC TEC MGP_WSBEiJ_T0091203.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56871663 56906590 - MGP_WSBEiJ_P0091203 Pml protein_coding protein_coding MGP_WSBEiJ_T0091204.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56872570 56906686 - MGP_WSBEiJ_P0091204 Pml protein_coding protein_coding MGP_WSBEiJ_T0091205.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56873036 56887881 - Pml protein_coding retained_intron MGP_WSBEiJ_T0091206.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56874246 56906560 - MGP_WSBEiJ_P0091206 Pml protein_coding protein_coding MGP_WSBEiJ_T0091207.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56874758 56884623 - Pml protein_coding processed_transcript MGP_WSBEiJ_T0091208.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56875545 56906686 - MGP_WSBEiJ_P0091208 Pml protein_coding protein_coding MGP_WSBEiJ_T0091209.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56884343 56906686 - MGP_WSBEiJ_P0091209 Pml protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091210.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56884886 56887891 - Pml protein_coding retained_intron MGP_WSBEiJ_T0091211.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56903966 56906523 - MGP_WSBEiJ_P0091211 Pml protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091212.1 MGP_WSBEiJ_G0034004.1 mouse_genomes_project 9 56904011 56906686 - MGP_WSBEiJ_P0091212 Pml protein_coding protein_coding MGP_WSBEiJ_T0092605.1 MGP_WSBEiJ_G0034327.1 mouse_genomes_project 9 105696230 105697963 - MGP_WSBEiJ_P0092605 1700080E11Rik protein_coding protein_coding MGP_WSBEiJ_T0092606.1 MGP_WSBEiJ_G0034327.1 mouse_genomes_project 9 105697182 105697947 - MGP_WSBEiJ_P0092606 1700080E11Rik protein_coding protein_coding MGP_WSBEiJ_T0002353.1 MGP_WSBEiJ_G0002270.1 mouse_genomes_project 9 86468473 86468587 - TEC TEC MGP_WSBEiJ_T0002354.1 MGP_WSBEiJ_G0002270.1 mouse_genomes_project 9 86468473 86468945 - TEC TEC MGP_WSBEiJ_T0091241.1 MGP_WSBEiJ_G0034015.1 mouse_genomes_project 9 58018196 58056729 - MGP_WSBEiJ_P0091241 Bbs4 protein_coding protein_coding MGP_WSBEiJ_T0090148.1 MGP_WSBEiJ_G0033618.1 mouse_genomes_project 9 23834041 23861658 + MGP_WSBEiJ_P0090148 B3gat1 protein_coding protein_coding MGP_WSBEiJ_T0090149.1 MGP_WSBEiJ_G0033618.1 mouse_genomes_project 9 23834116 23856387 + MGP_WSBEiJ_P0090149 B3gat1 protein_coding protein_coding MGP_WSBEiJ_T0090150.1 MGP_WSBEiJ_G0033618.1 mouse_genomes_project 9 23834137 23863399 + MGP_WSBEiJ_P0090150 B3gat1 protein_coding protein_coding MGP_WSBEiJ_T0090151.1 MGP_WSBEiJ_G0033618.1 mouse_genomes_project 9 23834164 23858290 + MGP_WSBEiJ_P0090151 B3gat1 protein_coding protein_coding MGP_WSBEiJ_T0090152.1 MGP_WSBEiJ_G0033618.1 mouse_genomes_project 9 23851869 23861646 + MGP_WSBEiJ_P0090152 B3gat1 protein_coding protein_coding MGP_WSBEiJ_T0090153.1 MGP_WSBEiJ_G0033618.1 mouse_genomes_project 9 23855591 23863405 + MGP_WSBEiJ_P0090153 B3gat1 protein_coding protein_coding MGP_WSBEiJ_T0090725.1 MGP_WSBEiJ_G0033852.1 mouse_genomes_project 9 43331543 43343701 + BC049352 protein_coding lincRNA MGP_WSBEiJ_T0090726.1 MGP_WSBEiJ_G0033852.1 mouse_genomes_project 9 43331570 43404435 + BC049352 protein_coding lincRNA MGP_WSBEiJ_T0090727.1 MGP_WSBEiJ_G0033852.1 mouse_genomes_project 9 43346498 43404435 + BC049352 protein_coding lincRNA MGP_WSBEiJ_T0090728.1 MGP_WSBEiJ_G0033852.1 mouse_genomes_project 9 43346498 43404390 + MGP_WSBEiJ_P0090728 BC049352 protein_coding protein_coding MGP_WSBEiJ_T0010889.1 MGP_WSBEiJ_G0009046.1 mouse_genomes_project 9 63968779 63968895 - Gm25640 miRNA miRNA MGP_WSBEiJ_T0091547.1 MGP_WSBEiJ_G0034096.1 mouse_genomes_project 9 65876835 65898610 - MGP_WSBEiJ_P0091547 protein_coding protein_coding MGP_WSBEiJ_T0091785.1 MGP_WSBEiJ_G0034142.1 mouse_genomes_project 9 72534956 72536008 + MGP_WSBEiJ_P0091785 Khdc3 protein_coding protein_coding MGP_WSBEiJ_T0091786.1 MGP_WSBEiJ_G0034142.1 mouse_genomes_project 9 72535518 72537559 + MGP_WSBEiJ_P0091786 Khdc3 protein_coding protein_coding MGP_WSBEiJ_T0091787.1 MGP_WSBEiJ_G0034142.1 mouse_genomes_project 9 72535518 72537559 + MGP_WSBEiJ_P0091787 Khdc3 protein_coding protein_coding MGP_WSBEiJ_T0091789.1 MGP_WSBEiJ_G0034142.1 mouse_genomes_project 9 72535630 72537313 + MGP_WSBEiJ_P0091789 Khdc3 protein_coding protein_coding MGP_WSBEiJ_T0015646.1 MGP_WSBEiJ_G0013776.1 mouse_genomes_project 9 125534738 125535012 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009083.1 MGP_WSBEiJ_G0007308.1 mouse_genomes_project 9 41504585 41505482 + Gm28215 lincRNA lincRNA MGP_WSBEiJ_T0089975.1 MGP_WSBEiJ_G0033547.1 mouse_genomes_project 9 17745255 17750895 + MGP_WSBEiJ_P0089975 A230050P20Rik protein_coding protein_coding MGP_WSBEiJ_T0089976.1 MGP_WSBEiJ_G0033547.1 mouse_genomes_project 9 17745271 17750895 + A230050P20Rik protein_coding retained_intron MGP_WSBEiJ_T0089977.1 MGP_WSBEiJ_G0033547.1 mouse_genomes_project 9 17745293 17746711 + A230050P20Rik protein_coding processed_transcript MGP_WSBEiJ_T0089978.1 MGP_WSBEiJ_G0033547.1 mouse_genomes_project 9 17745892 17750387 + A230050P20Rik protein_coding retained_intron MGP_WSBEiJ_T0089979.1 MGP_WSBEiJ_G0033547.1 mouse_genomes_project 9 17747387 17749737 + A230050P20Rik protein_coding retained_intron MGP_WSBEiJ_T0090987.1 MGP_WSBEiJ_G0033936.1 mouse_genomes_project 9 52399667 52458557 - MGP_WSBEiJ_P0090987 Elmod1 protein_coding protein_coding MGP_WSBEiJ_T0090988.1 MGP_WSBEiJ_G0033936.1 mouse_genomes_project 9 52399667 52426084 - MGP_WSBEiJ_P0090988 Elmod1 protein_coding protein_coding MGP_WSBEiJ_T0011542.1 MGP_WSBEiJ_G0009699.1 mouse_genomes_project 9 88510885 88511360 + Gm26461 misc_RNA misc_RNA MGP_WSBEiJ_T0090435.1 MGP_WSBEiJ_G0033726.1 mouse_genomes_project 9 36284504 36285437 - MGP_WSBEiJ_P0090435 Olfr916 protein_coding protein_coding MGP_WSBEiJ_T0093732.1 MGP_WSBEiJ_G0034522.1 mouse_genomes_project 9 120691469 120693966 + MGP_WSBEiJ_P0093732 Gm10608 protein_coding protein_coding MGP_WSBEiJ_T0090087.1 MGP_WSBEiJ_G0033590.1 mouse_genomes_project 9 18930737 18948636 - MGP_WSBEiJ_P0090087 Rgl3 protein_coding protein_coding MGP_WSBEiJ_T0002319.1 MGP_WSBEiJ_G0002236.1 mouse_genomes_project 9 71204266 71207475 - TEC TEC MGP_WSBEiJ_T0090469.1 MGP_WSBEiJ_G0033754.1 mouse_genomes_project 9 37280563 37281499 - MGP_WSBEiJ_P0090469 Olfr957 protein_coding protein_coding MGP_WSBEiJ_T0089958.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17500610 17504522 + Ubl5 protein_coding retained_intron MGP_WSBEiJ_T0089959.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17501059 17504711 + MGP_WSBEiJ_P0089959 Ubl5 protein_coding protein_coding MGP_WSBEiJ_T0089960.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17501812 17504524 + MGP_WSBEiJ_P0089960 Ubl5 protein_coding protein_coding MGP_WSBEiJ_T0089961.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17502081 17503396 + MGP_WSBEiJ_P0089961 Ubl5 protein_coding protein_coding MGP_WSBEiJ_T0089962.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17502566 17504522 + MGP_WSBEiJ_P0089962 Ubl5 protein_coding protein_coding MGP_WSBEiJ_T0089963.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17502579 17503645 + Ubl5 protein_coding retained_intron MGP_WSBEiJ_T0089964.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17502579 17504887 + MGP_WSBEiJ_P0089964 Ubl5 protein_coding protein_coding MGP_WSBEiJ_T0089965.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17502580 17504522 + MGP_WSBEiJ_P0089965 Ubl5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089966.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17502613 17504516 + MGP_WSBEiJ_P0089966 Ubl5 protein_coding protein_coding MGP_WSBEiJ_T0089967.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17502786 17504522 + MGP_WSBEiJ_P0089967 Ubl5 protein_coding protein_coding MGP_WSBEiJ_T0089968.1 MGP_WSBEiJ_G0033542.1 mouse_genomes_project 9 17502963 17504523 + MGP_WSBEiJ_P0089968 Ubl5 protein_coding protein_coding MGP_WSBEiJ_T0009085.1 MGP_WSBEiJ_G0007310.1 mouse_genomes_project 9 42202574 42213297 - Gm10687 lincRNA lincRNA MGP_WSBEiJ_T0093570.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112239270 112285475 - MGP_WSBEiJ_P0093570 Mlh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093571.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112239295 112285719 - MGP_WSBEiJ_P0093571 Mlh1 protein_coding protein_coding MGP_WSBEiJ_T0093572.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112239572 112241657 - Mlh1 protein_coding retained_intron MGP_WSBEiJ_T0093573.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112240890 112241969 - Mlh1 protein_coding retained_intron MGP_WSBEiJ_T0093574.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112240908 112285529 - Mlh1 protein_coding retained_intron MGP_WSBEiJ_T0093575.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112252319 112259553 - Mlh1 protein_coding retained_intron MGP_WSBEiJ_T0093576.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112252605 112268472 - MGP_WSBEiJ_P0093576 Mlh1 protein_coding protein_coding MGP_WSBEiJ_T0093577.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112261030 112272524 - MGP_WSBEiJ_P0093577 Mlh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093578.1 MGP_WSBEiJ_G0034482.1 mouse_genomes_project 9 112268168 112285463 - Mlh1 protein_coding processed_transcript MGP_WSBEiJ_T0099888.1 MGP_WSBEiJ_G0038551.1 mouse_genomes_project 9 109167930 109168039 - Gm25456 snoRNA snoRNA MGP_WSBEiJ_T0093686.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119525804 119554328 + MGP_WSBEiJ_P0093686 Azi2 protein_coding protein_coding MGP_WSBEiJ_T0093687.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119525862 119551918 + MGP_WSBEiJ_P0093687 Azi2 protein_coding protein_coding MGP_WSBEiJ_T0093688.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119525884 119549661 + MGP_WSBEiJ_P0093688 Azi2 protein_coding protein_coding MGP_WSBEiJ_T0093689.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119525921 119560292 + MGP_WSBEiJ_P0093689 Azi2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093690.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119525992 119537458 + Azi2 protein_coding retained_intron MGP_WSBEiJ_T0093691.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119536552 119551668 + MGP_WSBEiJ_P0093691 Azi2 protein_coding protein_coding MGP_WSBEiJ_T0093692.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119536613 119539454 + Azi2 protein_coding retained_intron MGP_WSBEiJ_T0093693.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119538681 119551063 + MGP_WSBEiJ_P0093693 Azi2 protein_coding protein_coding MGP_WSBEiJ_T0093694.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119543271 119550965 + Azi2 protein_coding retained_intron MGP_WSBEiJ_T0093695.1 MGP_WSBEiJ_G0034512.1 mouse_genomes_project 9 119548202 119551439 + MGP_WSBEiJ_P0093695 Azi2 protein_coding protein_coding MGP_WSBEiJ_T0092696.1 MGP_WSBEiJ_G0034344.1 mouse_genomes_project 9 107073822 107079118 - MGP_WSBEiJ_P0092696 Acy1 protein_coding protein_coding MGP_WSBEiJ_T0092697.1 MGP_WSBEiJ_G0034344.1 mouse_genomes_project 9 107073825 107078976 - Acy1 protein_coding retained_intron MGP_WSBEiJ_T0092698.1 MGP_WSBEiJ_G0034344.1 mouse_genomes_project 9 107073831 107075536 - Acy1 protein_coding retained_intron MGP_WSBEiJ_T0092699.1 MGP_WSBEiJ_G0034344.1 mouse_genomes_project 9 107075541 107077197 - Acy1 protein_coding retained_intron MGP_WSBEiJ_T0092700.1 MGP_WSBEiJ_G0034344.1 mouse_genomes_project 9 107075779 107079001 - MGP_WSBEiJ_P0092700 Acy1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092701.1 MGP_WSBEiJ_G0034344.1 mouse_genomes_project 9 107075910 107079118 - MGP_WSBEiJ_P0092701 Acy1 protein_coding protein_coding MGP_WSBEiJ_T0092702.1 MGP_WSBEiJ_G0034344.1 mouse_genomes_project 9 107077695 107078986 - MGP_WSBEiJ_P0092702 Acy1 protein_coding protein_coding MGP_WSBEiJ_T0010877.1 MGP_WSBEiJ_G0009034.1 mouse_genomes_project 9 46813774 46813859 - Gm23653 miRNA miRNA MGP_WSBEiJ_T0015601.1 MGP_WSBEiJ_G0013731.1 mouse_genomes_project 9 94499007 94499353 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091290.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59352318 59480740 - MGP_WSBEiJ_P0091290 Lrrc49 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091291.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59371881 59480474 - MGP_WSBEiJ_P0091291 Lrrc49 protein_coding protein_coding MGP_WSBEiJ_T0091292.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59371883 59480774 - MGP_WSBEiJ_P0091292 Lrrc49 protein_coding protein_coding MGP_WSBEiJ_T0091293.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59371893 59480149 - MGP_WSBEiJ_P0091293 Lrrc49 protein_coding protein_coding MGP_WSBEiJ_T0091294.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59371893 59480149 - MGP_WSBEiJ_P0091294 Lrrc49 protein_coding protein_coding MGP_WSBEiJ_T0091295.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59372472 59383119 - Lrrc49 protein_coding retained_intron MGP_WSBEiJ_T0091296.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59395457 59480518 - Lrrc49 protein_coding retained_intron MGP_WSBEiJ_T0091297.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59396011 59440638 - Lrrc49 protein_coding processed_transcript MGP_WSBEiJ_T0091298.1 MGP_WSBEiJ_G0034027.1 mouse_genomes_project 9 59473138 59480287 - MGP_WSBEiJ_P0091298 Lrrc49 protein_coding protein_coding MGP_WSBEiJ_T0099889.1 MGP_WSBEiJ_G0038552.1 mouse_genomes_project 9 109565666 109565813 - Gm23034 snoRNA snoRNA MGP_WSBEiJ_T0090610.1 MGP_WSBEiJ_G0033813.1 mouse_genomes_project 9 42321036 42328966 + MGP_WSBEiJ_P0090610 Ccdc153 protein_coding protein_coding MGP_WSBEiJ_T0015573.1 MGP_WSBEiJ_G0013703.1 mouse_genomes_project 9 82877779 82877945 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010860.1 MGP_WSBEiJ_G0009017.1 mouse_genomes_project 9 17964597 17964688 - Mir7082 miRNA miRNA MGP_WSBEiJ_T0015562.1 MGP_WSBEiJ_G0013692.1 mouse_genomes_project 9 76566288 76566493 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010923.1 MGP_WSBEiJ_G0009080.1 mouse_genomes_project 9 124424890 124424989 + Mir138-1 miRNA miRNA MGP_WSBEiJ_T0089892.1 MGP_WSBEiJ_G0033506.1 mouse_genomes_project 9 15629583 15630637 - MGP_WSBEiJ_P0089892 Olfr24 protein_coding protein_coding MGP_WSBEiJ_T0090463.1 MGP_WSBEiJ_G0033748.1 mouse_genomes_project 9 36969648 36970611 - MGP_WSBEiJ_P0090463 Olfr945 protein_coding protein_coding MGP_WSBEiJ_T0009170.1 MGP_WSBEiJ_G0007377.1 mouse_genomes_project 9 102993597 103003198 + Gm29387 lincRNA lincRNA MGP_WSBEiJ_T0017975.1 MGP_WSBEiJ_G0015176.1 mouse_genomes_project 9 103904838 103944186 + 5830418P13Rik processed_transcript antisense MGP_WSBEiJ_T0017976.1 MGP_WSBEiJ_G0015176.1 mouse_genomes_project 9 103906381 103907522 + 5830418P13Rik processed_transcript retained_intron MGP_WSBEiJ_T0017977.1 MGP_WSBEiJ_G0015176.1 mouse_genomes_project 9 103906405 103909023 + 5830418P13Rik processed_transcript antisense MGP_WSBEiJ_T0092424.1 MGP_WSBEiJ_G0034292.1 mouse_genomes_project 9 100849243 100903064 - MGP_WSBEiJ_P0092424 Nck1 protein_coding protein_coding MGP_WSBEiJ_T0092425.1 MGP_WSBEiJ_G0034292.1 mouse_genomes_project 9 100851951 100863769 - MGP_WSBEiJ_P0092425 Nck1 protein_coding protein_coding MGP_WSBEiJ_T0092426.1 MGP_WSBEiJ_G0034292.1 mouse_genomes_project 9 100854528 100903052 - MGP_WSBEiJ_P0092426 Nck1 protein_coding protein_coding MGP_WSBEiJ_T0092427.1 MGP_WSBEiJ_G0034292.1 mouse_genomes_project 9 100854751 100902661 - MGP_WSBEiJ_P0092427 Nck1 protein_coding protein_coding MGP_WSBEiJ_T0015565.1 MGP_WSBEiJ_G0013695.1 mouse_genomes_project 9 76878837 76879239 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089992.1 MGP_WSBEiJ_G0033555.1 mouse_genomes_project 9 17917394 17918553 + MGP_WSBEiJ_P0089992 Icam4 protein_coding protein_coding MGP_WSBEiJ_T0091662.1 MGP_WSBEiJ_G0034123.1 mouse_genomes_project 9 70534041 70628454 + MGP_WSBEiJ_P0091662 Aldh1a2 protein_coding protein_coding MGP_WSBEiJ_T0090937.1 MGP_WSBEiJ_G0033915.1 mouse_genomes_project 9 49522693 49526389 + MGP_WSBEiJ_P0090937 Btg4 protein_coding protein_coding MGP_WSBEiJ_T0091531.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65609508 65688932 - MGP_WSBEiJ_P0091531 Usp3 protein_coding protein_coding MGP_WSBEiJ_T0091532.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65611096 65688790 - MGP_WSBEiJ_P0091532 Usp3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091533.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65612089 65688826 - MGP_WSBEiJ_P0091533 Usp3 protein_coding protein_coding MGP_WSBEiJ_T0091534.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65612739 65688748 - Usp3 protein_coding retained_intron MGP_WSBEiJ_T0091535.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65612937 65688796 - MGP_WSBEiJ_P0091535 Usp3 protein_coding protein_coding MGP_WSBEiJ_T0091536.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65613111 65615189 - Usp3 protein_coding retained_intron MGP_WSBEiJ_T0091537.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65613270 65615670 - Usp3 protein_coding retained_intron MGP_WSBEiJ_T0091538.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65621528 65625263 - Usp3 protein_coding retained_intron MGP_WSBEiJ_T0091539.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65621843 65635488 - Usp3 protein_coding processed_transcript MGP_WSBEiJ_T0091540.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65640599 65662842 - Usp3 protein_coding retained_intron MGP_WSBEiJ_T0091541.1 MGP_WSBEiJ_G0034094.1 mouse_genomes_project 9 65643004 65671805 - Usp3 protein_coding processed_transcript MGP_WSBEiJ_T0098600.1 MGP_WSBEiJ_G0037263.1 mouse_genomes_project 9 49275443 49275549 + Gm25558 snRNA snRNA MGP_WSBEiJ_T0009061.1 MGP_WSBEiJ_G0007288.1 mouse_genomes_project 9 18312689 18319175 - Gm16853 lincRNA lincRNA MGP_WSBEiJ_T0093737.1 MGP_WSBEiJ_G0034524.1 mouse_genomes_project 9 120788082 120875989 - MGP_WSBEiJ_P0093737 Oxsr1 protein_coding protein_coding MGP_WSBEiJ_T0093738.1 MGP_WSBEiJ_G0034524.1 mouse_genomes_project 9 120790318 120875884 - MGP_WSBEiJ_P0093738 Oxsr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093739.1 MGP_WSBEiJ_G0034524.1 mouse_genomes_project 9 120790793 120793052 - Oxsr1 protein_coding retained_intron MGP_WSBEiJ_T0093740.1 MGP_WSBEiJ_G0034524.1 mouse_genomes_project 9 120792457 120814486 - MGP_WSBEiJ_P0093740 Oxsr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092687.1 MGP_WSBEiJ_G0034341.1 mouse_genomes_project 9 106914460 106984945 + MGP_WSBEiJ_P0092687 Poc1a protein_coding protein_coding MGP_WSBEiJ_T0092688.1 MGP_WSBEiJ_G0034341.1 mouse_genomes_project 9 106914779 106984958 + MGP_WSBEiJ_P0092688 Poc1a protein_coding protein_coding MGP_WSBEiJ_T0092689.1 MGP_WSBEiJ_G0034341.1 mouse_genomes_project 9 106924314 106985581 + Poc1a protein_coding processed_transcript MGP_WSBEiJ_T0092690.1 MGP_WSBEiJ_G0034341.1 mouse_genomes_project 9 106934227 106984943 + Poc1a protein_coding processed_transcript MGP_WSBEiJ_T0092691.1 MGP_WSBEiJ_G0034341.1 mouse_genomes_project 9 106960920 106984944 + Poc1a protein_coding processed_transcript MGP_WSBEiJ_T0093748.1 MGP_WSBEiJ_G0034527.1 mouse_genomes_project 9 120915604 120952834 + MGP_WSBEiJ_P0093748 Xylb protein_coding protein_coding MGP_WSBEiJ_T0091770.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72434174 72468381 - MGP_WSBEiJ_P0091770 Pigb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091771.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72435236 72442413 - MGP_WSBEiJ_P0091771 Pigb protein_coding protein_coding MGP_WSBEiJ_T0091773.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72440466 72467702 - MGP_WSBEiJ_P0091773 Pigb protein_coding protein_coding MGP_WSBEiJ_T0091774.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72441419 72467654 - MGP_WSBEiJ_P0091774 Pigb protein_coding protein_coding MGP_WSBEiJ_T0091776.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72442451 72467702 - MGP_WSBEiJ_P0091776 Pigb protein_coding protein_coding MGP_WSBEiJ_T0091777.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72444366 72445960 - Pigb protein_coding retained_intron MGP_WSBEiJ_T0091778.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72449100 72464988 - MGP_WSBEiJ_P0091778 Pigb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091779.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72456577 72460532 - Pigb protein_coding retained_intron MGP_WSBEiJ_T0091780.1 MGP_WSBEiJ_G0034140.1 mouse_genomes_project 9 72461185 72462973 - Pigb protein_coding retained_intron MGP_WSBEiJ_T0090179.1 MGP_WSBEiJ_G0033628.1 mouse_genomes_project 9 24541588 24546482 + MGP_WSBEiJ_P0090179 Spata19 protein_coding protein_coding MGP_WSBEiJ_T0010919.1 MGP_WSBEiJ_G0009076.1 mouse_genomes_project 9 119488392 119488469 + Gm22008 miRNA miRNA MGP_WSBEiJ_T0015555.1 MGP_WSBEiJ_G0013685.1 mouse_genomes_project 9 74161872 74162179 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093589.1 MGP_WSBEiJ_G0034485.1 mouse_genomes_project 9 112458508 112520343 + MGP_WSBEiJ_P0093589 Dclk3 protein_coding protein_coding MGP_WSBEiJ_T0091833.1 MGP_WSBEiJ_G0034152.1 mouse_genomes_project 9 74789780 74826513 + MGP_WSBEiJ_P0091833 Gnb5 protein_coding protein_coding MGP_WSBEiJ_T0099874.1 MGP_WSBEiJ_G0038537.1 mouse_genomes_project 9 86642184 86642312 + Gm22138 snoRNA snoRNA MGP_WSBEiJ_T0090000.1 MGP_WSBEiJ_G0033562.1 mouse_genomes_project 9 18054061 18104263 + MGP_WSBEiJ_P0090000 Pde4a protein_coding protein_coding MGP_WSBEiJ_T0090001.1 MGP_WSBEiJ_G0033562.1 mouse_genomes_project 9 18069930 18102643 + Pde4a protein_coding retained_intron MGP_WSBEiJ_T0090002.1 MGP_WSBEiJ_G0033562.1 mouse_genomes_project 9 18072443 18083457 + Pde4a protein_coding retained_intron MGP_WSBEiJ_T0090003.1 MGP_WSBEiJ_G0033562.1 mouse_genomes_project 9 18072445 18102643 + MGP_WSBEiJ_P0090003 Pde4a protein_coding protein_coding MGP_WSBEiJ_T0090004.1 MGP_WSBEiJ_G0033562.1 mouse_genomes_project 9 18082154 18084705 + Pde4a protein_coding retained_intron MGP_WSBEiJ_T0090005.1 MGP_WSBEiJ_G0033562.1 mouse_genomes_project 9 18086683 18102643 + MGP_WSBEiJ_P0090005 Pde4a protein_coding protein_coding MGP_WSBEiJ_T0090314.1 MGP_WSBEiJ_G0033666.1 mouse_genomes_project 9 33557492 33563312 - MGP_WSBEiJ_P0090314 9230110F15Rik protein_coding protein_coding MGP_WSBEiJ_T0002406.1 MGP_WSBEiJ_G0002322.1 mouse_genomes_project 9 105620637 105623916 + TEC TEC MGP_WSBEiJ_T0092570.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104660429 104769414 - MGP_WSBEiJ_P0092570 Dnajc13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092571.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104660436 104769429 - MGP_WSBEiJ_P0092571 Dnajc13 protein_coding protein_coding MGP_WSBEiJ_T0092572.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104661206 104662648 - Dnajc13 protein_coding retained_intron MGP_WSBEiJ_T0092573.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104661327 104666458 - Dnajc13 protein_coding processed_transcript MGP_WSBEiJ_T0092574.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104661421 104666716 - Dnajc13 protein_coding retained_intron MGP_WSBEiJ_T0092575.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104661471 104753325 - MGP_WSBEiJ_P0092575 Dnajc13 protein_coding protein_coding MGP_WSBEiJ_T0092576.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104666447 104672410 - MGP_WSBEiJ_P0092576 Dnajc13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092577.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104671722 104674658 - MGP_WSBEiJ_P0092577 Dnajc13 protein_coding protein_coding MGP_WSBEiJ_T0092578.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104674367 104677664 - Dnajc13 protein_coding retained_intron MGP_WSBEiJ_T0092579.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104691668 104696484 - Dnajc13 protein_coding retained_intron MGP_WSBEiJ_T0092580.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104698617 104712176 - MGP_WSBEiJ_P0092580 Dnajc13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092581.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104702015 104710017 - Dnajc13 protein_coding retained_intron MGP_WSBEiJ_T0092582.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104705560 104713579 - Dnajc13 protein_coding retained_intron MGP_WSBEiJ_T0092583.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104732133 104732773 - Dnajc13 protein_coding retained_intron MGP_WSBEiJ_T0092584.1 MGP_WSBEiJ_G0034322.1 mouse_genomes_project 9 104741300 104769402 - Dnajc13 protein_coding retained_intron MGP_WSBEiJ_T0090129.1 MGP_WSBEiJ_G0033610.1 mouse_genomes_project 9 21141887 21335769 + MGP_WSBEiJ_P0090129 Npsr1 protein_coding protein_coding MGP_WSBEiJ_T0090130.1 MGP_WSBEiJ_G0033610.1 mouse_genomes_project 9 21141909 21362494 + MGP_WSBEiJ_P0090130 Npsr1 protein_coding protein_coding MGP_WSBEiJ_T0090131.1 MGP_WSBEiJ_G0033610.1 mouse_genomes_project 9 21305573 21359909 + MGP_WSBEiJ_P0090131 Npsr1 protein_coding protein_coding MGP_WSBEiJ_T0090132.1 MGP_WSBEiJ_G0033610.1 mouse_genomes_project 9 21346465 21360967 + Npsr1 protein_coding processed_transcript MGP_WSBEiJ_T0099848.1 MGP_WSBEiJ_G0038511.1 mouse_genomes_project 9 38709599 38709689 + Snord14e snoRNA snoRNA MGP_WSBEiJ_T0090409.1 MGP_WSBEiJ_G0033701.1 mouse_genomes_project 9 35636350 35638186 + MGP_WSBEiJ_P0090409 Olfr884 protein_coding protein_coding MGP_WSBEiJ_T0090410.1 MGP_WSBEiJ_G0033701.1 mouse_genomes_project 9 35636993 35638186 + MGP_WSBEiJ_P0090410 Olfr884 protein_coding protein_coding MGP_WSBEiJ_T0002427.1 MGP_WSBEiJ_G0002343.1 mouse_genomes_project 9 112056341 112056754 - TEC TEC MGP_WSBEiJ_T0010912.1 MGP_WSBEiJ_G0009069.1 mouse_genomes_project 9 109700298 109700380 + Mir711 miRNA miRNA MGP_WSBEiJ_T0010907.1 MGP_WSBEiJ_G0009064.1 mouse_genomes_project 9 108811534 108811652 - miRNA miRNA MGP_WSBEiJ_T0100333.1 MGP_WSBEiJ_G0038823.1 mouse_genomes_project 9 99770488 99785221 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100334.1 MGP_WSBEiJ_G0038823.1 mouse_genomes_project 9 99784709 99789008 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0090385.1 MGP_WSBEiJ_G0033686.1 mouse_genomes_project 9 35086872 35097408 + MGP_WSBEiJ_P0090385 Esam protein_coding protein_coding MGP_WSBEiJ_T0090386.1 MGP_WSBEiJ_G0033686.1 mouse_genomes_project 9 35087575 35096205 + MGP_WSBEiJ_P0090386 Esam protein_coding protein_coding MGP_WSBEiJ_T0090387.1 MGP_WSBEiJ_G0033686.1 mouse_genomes_project 9 35089045 35090437 + MGP_WSBEiJ_P0090387 Esam protein_coding protein_coding MGP_WSBEiJ_T0090388.1 MGP_WSBEiJ_G0033686.1 mouse_genomes_project 9 35089719 35093292 + MGP_WSBEiJ_P0090388 Esam protein_coding protein_coding MGP_WSBEiJ_T0090389.1 MGP_WSBEiJ_G0033686.1 mouse_genomes_project 9 35095342 35096581 + Esam protein_coding retained_intron MGP_WSBEiJ_T0097128.1 MGP_WSBEiJ_G0035809.1 mouse_genomes_project 9 87141267 87141401 + Gm24649 rRNA rRNA MGP_WSBEiJ_T0093537.1 MGP_WSBEiJ_G0034477.1 mouse_genomes_project 9 111952806 111970098 + MGP_WSBEiJ_P0093537 Lrrc2 protein_coding protein_coding MGP_WSBEiJ_T0093538.1 MGP_WSBEiJ_G0034477.1 mouse_genomes_project 9 111952821 111977357 + MGP_WSBEiJ_P0093538 Lrrc2 protein_coding protein_coding MGP_WSBEiJ_T0093539.1 MGP_WSBEiJ_G0034477.1 mouse_genomes_project 9 111959905 111975297 + MGP_WSBEiJ_P0093539 Lrrc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002346.1 MGP_WSBEiJ_G0002263.1 mouse_genomes_project 9 76886117 76887126 - TEC TEC MGP_WSBEiJ_T0002316.1 MGP_WSBEiJ_G0002233.1 mouse_genomes_project 9 54942984 54945019 - TEC TEC MGP_WSBEiJ_T0091135.1 MGP_WSBEiJ_G0033982.1 mouse_genomes_project 9 56035047 56063906 - MGP_WSBEiJ_P0091135 Scamp5 protein_coding protein_coding MGP_WSBEiJ_T0090172.1 MGP_WSBEiJ_G0033624.1 mouse_genomes_project 9 24113124 24138577 - MGP_WSBEiJ_P0090172 Vps26b protein_coding protein_coding MGP_WSBEiJ_T0009121.1 MGP_WSBEiJ_G0007338.1 mouse_genomes_project 9 74033904 74034606 - Gm28622 lincRNA lincRNA MGP_WSBEiJ_T0010908.1 MGP_WSBEiJ_G0009065.1 mouse_genomes_project 9 109314150 109314270 - Gm24083 miRNA miRNA MGP_WSBEiJ_T0009084.1 MGP_WSBEiJ_G0007309.1 mouse_genomes_project 9 42190302 42199796 + Gm26737 lincRNA lincRNA MGP_WSBEiJ_T0015523.1 MGP_WSBEiJ_G0013653.1 mouse_genomes_project 9 35784633 35785655 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010870.1 MGP_WSBEiJ_G0009027.1 mouse_genomes_project 9 39528325 39528402 + Mir125b-1 miRNA miRNA MGP_WSBEiJ_T0090114.1 MGP_WSBEiJ_G0033605.1 mouse_genomes_project 9 19417737 19458945 + MGP_WSBEiJ_P0090114 9530077C05Rik protein_coding protein_coding MGP_WSBEiJ_T0098645.1 MGP_WSBEiJ_G0037308.1 mouse_genomes_project 9 119963932 119964013 - Gm22479 snRNA snRNA MGP_WSBEiJ_T0092981.1 MGP_WSBEiJ_G0034387.1 mouse_genomes_project 9 108608367 108621885 + MGP_WSBEiJ_P0092981 Mst1r protein_coding protein_coding MGP_WSBEiJ_T0092982.1 MGP_WSBEiJ_G0034387.1 mouse_genomes_project 9 108608401 108621883 + MGP_WSBEiJ_P0092982 Mst1r protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092983.1 MGP_WSBEiJ_G0034387.1 mouse_genomes_project 9 108616504 108617230 + Mst1r protein_coding retained_intron MGP_WSBEiJ_T0092984.1 MGP_WSBEiJ_G0034387.1 mouse_genomes_project 9 108617725 108618406 + Mst1r protein_coding retained_intron MGP_WSBEiJ_T0093356.1 MGP_WSBEiJ_G0034447.1 mouse_genomes_project 9 110721168 110728837 + MGP_WSBEiJ_P0093356 Spink8 protein_coding protein_coding MGP_WSBEiJ_T0093357.1 MGP_WSBEiJ_G0034447.1 mouse_genomes_project 9 110724777 110734878 + MGP_WSBEiJ_P0093357 Spink8 protein_coding protein_coding MGP_WSBEiJ_T0093358.1 MGP_WSBEiJ_G0034447.1 mouse_genomes_project 9 110724860 110734873 + MGP_WSBEiJ_P0093358 Spink8 protein_coding protein_coding MGP_WSBEiJ_T0099869.1 MGP_WSBEiJ_G0038532.1 mouse_genomes_project 9 76293498 76293618 - Gm22938 snoRNA snoRNA MGP_WSBEiJ_T0091890.1 MGP_WSBEiJ_G0034169.1 mouse_genomes_project 9 77241353 77266139 + MGP_WSBEiJ_P0091890 Klhl31 protein_coding protein_coding MGP_WSBEiJ_T0090086.1 MGP_WSBEiJ_G0033589.1 mouse_genomes_project 9 18918117 18922787 - MGP_WSBEiJ_P0090086 Epor protein_coding protein_coding MGP_WSBEiJ_T0002326.1 MGP_WSBEiJ_G0002243.1 mouse_genomes_project 9 71678096 71680102 + TEC TEC MGP_WSBEiJ_T0090571.1 MGP_WSBEiJ_G0033805.1 mouse_genomes_project 9 41885016 41887557 + MGP_WSBEiJ_P0090571 Gm3898 protein_coding protein_coding MGP_WSBEiJ_T0091942.1 MGP_WSBEiJ_G0034189.1 mouse_genomes_project 9 78322853 78426230 + MGP_WSBEiJ_P0091942 Cd109 protein_coding protein_coding MGP_WSBEiJ_T0091943.1 MGP_WSBEiJ_G0034189.1 mouse_genomes_project 9 78323070 78325396 + Cd109 protein_coding processed_transcript MGP_WSBEiJ_T0010862.1 MGP_WSBEiJ_G0009019.1 mouse_genomes_project 9 18544365 18544498 - Mir1946b miRNA miRNA MGP_WSBEiJ_T0099826.1 MGP_WSBEiJ_G0038489.1 mouse_genomes_project 9 12123126 12123197 + Gm24299 snoRNA snoRNA MGP_WSBEiJ_T0090560.1 MGP_WSBEiJ_G0033797.1 mouse_genomes_project 9 40502310 40955727 - MGP_WSBEiJ_P0090560 Grik4 protein_coding protein_coding MGP_WSBEiJ_T0090561.1 MGP_WSBEiJ_G0033797.1 mouse_genomes_project 9 40504378 40818355 - MGP_WSBEiJ_P0090561 Grik4 protein_coding protein_coding MGP_WSBEiJ_T0093464.1 MGP_WSBEiJ_G0034460.1 mouse_genomes_project 9 111432723 111486255 + MGP_WSBEiJ_P0093464 Kif9 protein_coding protein_coding MGP_WSBEiJ_T0093465.1 MGP_WSBEiJ_G0034460.1 mouse_genomes_project 9 111432877 111446414 + MGP_WSBEiJ_P0093465 Kif9 protein_coding protein_coding MGP_WSBEiJ_T0093466.1 MGP_WSBEiJ_G0034460.1 mouse_genomes_project 9 111432913 111487597 + MGP_WSBEiJ_P0093466 Kif9 protein_coding protein_coding MGP_WSBEiJ_T0093467.1 MGP_WSBEiJ_G0034460.1 mouse_genomes_project 9 111432913 111487456 + MGP_WSBEiJ_P0093467 Kif9 protein_coding protein_coding MGP_WSBEiJ_T0093468.1 MGP_WSBEiJ_G0034460.1 mouse_genomes_project 9 111432913 111484549 + MGP_WSBEiJ_P0093468 Kif9 protein_coding protein_coding MGP_WSBEiJ_T0093851.1 MGP_WSBEiJ_G0034560.1 mouse_genomes_project 9 123494582 123507070 - MGP_WSBEiJ_P0093851 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093852.1 MGP_WSBEiJ_G0034560.1 mouse_genomes_project 9 123495010 123532555 - MGP_WSBEiJ_P0093852 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093853.1 MGP_WSBEiJ_G0034560.1 mouse_genomes_project 9 123495098 123507216 - protein_coding retained_intron MGP_WSBEiJ_T0093854.1 MGP_WSBEiJ_G0034560.1 mouse_genomes_project 9 123495386 123507052 - MGP_WSBEiJ_P0093854 protein_coding protein_coding MGP_WSBEiJ_T0093855.1 MGP_WSBEiJ_G0034560.1 mouse_genomes_project 9 123495897 123507155 - protein_coding retained_intron MGP_WSBEiJ_T0093856.1 MGP_WSBEiJ_G0034560.1 mouse_genomes_project 9 123515545 123529356 - protein_coding retained_intron MGP_WSBEiJ_T0009071.1 MGP_WSBEiJ_G0007298.1 mouse_genomes_project 9 31353543 31368370 + lincRNA lincRNA MGP_WSBEiJ_T0002313.1 MGP_WSBEiJ_G0002230.1 mouse_genomes_project 9 32758199 32759352 - TEC TEC MGP_WSBEiJ_T0005431.1 MGP_WSBEiJ_G0004581.1 mouse_genomes_project 9 97567829 97589194 + Gm15891 antisense antisense MGP_WSBEiJ_T0009190.1 MGP_WSBEiJ_G0007392.1 mouse_genomes_project 9 112576880 112581800 - Gm42523 lincRNA lincRNA MGP_WSBEiJ_T0091035.1 MGP_WSBEiJ_G0033953.1 mouse_genomes_project 9 53528591 53545035 - MGP_WSBEiJ_P0091035 Chrna3 protein_coding protein_coding MGP_WSBEiJ_T0015510.1 MGP_WSBEiJ_G0013640.1 mouse_genomes_project 9 21876953 21877953 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015517.1 MGP_WSBEiJ_G0013647.1 mouse_genomes_project 9 32677131 32677449 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093107.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109079305 109127907 + MGP_WSBEiJ_P0093107 Usp4 protein_coding protein_coding MGP_WSBEiJ_T0093108.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109079326 109121261 + MGP_WSBEiJ_P0093108 Usp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093109.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109079349 109089279 + Usp4 protein_coding retained_intron MGP_WSBEiJ_T0093110.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109079365 109127882 + MGP_WSBEiJ_P0093110 Usp4 protein_coding protein_coding MGP_WSBEiJ_T0093111.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109087926 109089394 + Usp4 protein_coding processed_transcript MGP_WSBEiJ_T0093112.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109090744 109094284 + Usp4 protein_coding retained_intron MGP_WSBEiJ_T0093113.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109099351 109101671 + Usp4 protein_coding retained_intron MGP_WSBEiJ_T0093114.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109104121 109127621 + MGP_WSBEiJ_P0093114 Usp4 protein_coding protein_coding MGP_WSBEiJ_T0093115.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109113056 109127154 + MGP_WSBEiJ_P0093115 Usp4 protein_coding protein_coding MGP_WSBEiJ_T0093116.1 MGP_WSBEiJ_G0034409.1 mouse_genomes_project 9 109126236 109127607 + Usp4 protein_coding retained_intron MGP_WSBEiJ_T0015604.1 MGP_WSBEiJ_G0013734.1 mouse_genomes_project 9 95752386 95752828 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092211.1 MGP_WSBEiJ_G0034243.1 mouse_genomes_project 9 92352575 92375387 + MGP_WSBEiJ_P0092211 Plscr2 protein_coding protein_coding MGP_WSBEiJ_T0092212.1 MGP_WSBEiJ_G0034243.1 mouse_genomes_project 9 92352603 92359906 + MGP_WSBEiJ_P0092212 Plscr2 protein_coding protein_coding MGP_WSBEiJ_T0092213.1 MGP_WSBEiJ_G0034243.1 mouse_genomes_project 9 92368539 92369962 + Plscr2 protein_coding retained_intron MGP_WSBEiJ_T0090176.1 MGP_WSBEiJ_G0033627.1 mouse_genomes_project 9 24435605 24466845 + MGP_WSBEiJ_P0090176 Igsf9b protein_coding protein_coding MGP_WSBEiJ_T0090177.1 MGP_WSBEiJ_G0033627.1 mouse_genomes_project 9 24435607 24471472 + MGP_WSBEiJ_P0090177 Igsf9b protein_coding protein_coding MGP_WSBEiJ_T0090178.1 MGP_WSBEiJ_G0033627.1 mouse_genomes_project 9 24435831 24482683 + MGP_WSBEiJ_P0090178 Igsf9b protein_coding unknown_likely_coding MGP_WSBEiJ_T0091087.1 MGP_WSBEiJ_G0033968.1 mouse_genomes_project 9 55157810 55225535 - MGP_WSBEiJ_P0091087 Lingo1 protein_coding protein_coding MGP_WSBEiJ_T0091088.1 MGP_WSBEiJ_G0033968.1 mouse_genomes_project 9 55158423 55174966 - MGP_WSBEiJ_P0091088 Lingo1 protein_coding protein_coding MGP_WSBEiJ_T0091089.1 MGP_WSBEiJ_G0033968.1 mouse_genomes_project 9 55158440 55187058 - MGP_WSBEiJ_P0091089 Lingo1 protein_coding protein_coding MGP_WSBEiJ_T0002387.1 MGP_WSBEiJ_G0002303.1 mouse_genomes_project 9 101516702 101518742 + TEC TEC MGP_WSBEiJ_T0090462.1 MGP_WSBEiJ_G0033747.1 mouse_genomes_project 9 36818175 36839155 + MGP_WSBEiJ_P0090462 Olfr943 protein_coding protein_coding MGP_WSBEiJ_T0097510.1 MGP_WSBEiJ_G0036173.1 mouse_genomes_project 9 125544435 125562916 - Gm17021 sense_overlapping sense_overlapping MGP_WSBEiJ_T0090502.1 MGP_WSBEiJ_G0033781.1 mouse_genomes_project 9 38042533 38043550 + MGP_WSBEiJ_P0090502 Olfr986 protein_coding protein_coding MGP_WSBEiJ_T0091448.1 MGP_WSBEiJ_G0034070.1 mouse_genomes_project 9 64312154 64348867 + MGP_WSBEiJ_P0091448 Clpx protein_coding protein_coding MGP_WSBEiJ_T0091449.1 MGP_WSBEiJ_G0034070.1 mouse_genomes_project 9 64312189 64348868 + MGP_WSBEiJ_P0091449 Clpx protein_coding protein_coding MGP_WSBEiJ_T0091450.1 MGP_WSBEiJ_G0034070.1 mouse_genomes_project 9 64312226 64327956 + Clpx protein_coding retained_intron MGP_WSBEiJ_T0091451.1 MGP_WSBEiJ_G0034070.1 mouse_genomes_project 9 64328867 64337243 + MGP_WSBEiJ_P0091451 Clpx protein_coding protein_coding MGP_WSBEiJ_T0091059.1 MGP_WSBEiJ_G0033959.1 mouse_genomes_project 9 53983680 54043456 - MGP_WSBEiJ_P0091059 Etfa protein_coding protein_coding MGP_WSBEiJ_T0091060.1 MGP_WSBEiJ_G0033959.1 mouse_genomes_project 9 54004688 54018667 - Etfa protein_coding processed_transcript MGP_WSBEiJ_T0091061.1 MGP_WSBEiJ_G0033959.1 mouse_genomes_project 9 54017890 54043321 - Etfa protein_coding processed_transcript MGP_WSBEiJ_T0091062.1 MGP_WSBEiJ_G0033959.1 mouse_genomes_project 9 54019982 54043009 - Etfa protein_coding processed_transcript MGP_WSBEiJ_T0005474.1 MGP_WSBEiJ_G0004616.1 mouse_genomes_project 9 116493126 116498780 - Gm4665 antisense antisense MGP_WSBEiJ_T0089980.1 MGP_WSBEiJ_G0033548.1 mouse_genomes_project 9 17750424 17756293 - MGP_WSBEiJ_P0089980 Angptl6 protein_coding protein_coding MGP_WSBEiJ_T0089693.1 MGP_WSBEiJ_G0033440.1 mouse_genomes_project 9 2107301 2135110 + MGP_WSBEiJ_P0089693 Casp12 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089694.1 MGP_WSBEiJ_G0033440.1 mouse_genomes_project 9 2108510 2137781 + MGP_WSBEiJ_P0089694 Casp12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089695.1 MGP_WSBEiJ_G0033440.1 mouse_genomes_project 9 2108513 2117630 + Casp12 protein_coding retained_intron MGP_WSBEiJ_T0089696.1 MGP_WSBEiJ_G0033440.1 mouse_genomes_project 9 2108530 2118633 + Casp12 protein_coding retained_intron MGP_WSBEiJ_T0089697.1 MGP_WSBEiJ_G0033440.1 mouse_genomes_project 9 2108538 2123017 + MGP_WSBEiJ_P0089697 Casp12 protein_coding protein_coding MGP_WSBEiJ_T0002373.1 MGP_WSBEiJ_G0002289.1 mouse_genomes_project 9 96186686 96188913 + TEC TEC MGP_WSBEiJ_T0090320.1 MGP_WSBEiJ_G0033672.1 mouse_genomes_project 9 34137385 34140234 - MGP_WSBEiJ_P0090320 A630095E13Rik protein_coding protein_coding MGP_WSBEiJ_T0090321.1 MGP_WSBEiJ_G0033672.1 mouse_genomes_project 9 34137385 34140234 - MGP_WSBEiJ_P0090321 A630095E13Rik protein_coding protein_coding MGP_WSBEiJ_T0090322.1 MGP_WSBEiJ_G0033672.1 mouse_genomes_project 9 34137387 34148913 - A630095E13Rik protein_coding retained_intron MGP_WSBEiJ_T0093339.1 MGP_WSBEiJ_G0034440.1 mouse_genomes_project 9 109809427 109818418 - MGP_WSBEiJ_P0093339 protein_coding protein_coding MGP_WSBEiJ_T0093340.1 MGP_WSBEiJ_G0034440.1 mouse_genomes_project 9 109818103 109818405 - protein_coding retained_intron MGP_WSBEiJ_T0090839.1 MGP_WSBEiJ_G0033890.1 mouse_genomes_project 9 47761467 47774952 - MGP_WSBEiJ_P0090839 Ankk1 protein_coding protein_coding MGP_WSBEiJ_T0010903.1 MGP_WSBEiJ_G0009060.1 mouse_genomes_project 9 106777378 106777468 + Mir135a-1 miRNA miRNA MGP_WSBEiJ_T0005379.1 MGP_WSBEiJ_G0004547.1 mouse_genomes_project 9 56677386 56693613 + Gm16130 antisense antisense MGP_WSBEiJ_T0009171.1 MGP_WSBEiJ_G0007378.1 mouse_genomes_project 9 103131420 103132390 + 4930533D04Rik lincRNA lincRNA MGP_WSBEiJ_T0009086.1 MGP_WSBEiJ_G0007311.1 mouse_genomes_project 9 42576079 42577897 + C030014I23Rik lincRNA lincRNA MGP_WSBEiJ_T0009087.1 MGP_WSBEiJ_G0007311.1 mouse_genomes_project 9 42576933 42580344 + C030014I23Rik lincRNA lincRNA MGP_WSBEiJ_T0089908.1 MGP_WSBEiJ_G0033522.1 mouse_genomes_project 9 16347213 16348152 + MGP_WSBEiJ_P0089908 Olfr851 protein_coding protein_coding MGP_WSBEiJ_T0015531.1 MGP_WSBEiJ_G0013661.1 mouse_genomes_project 9 53824488 53825581 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015636.1 MGP_WSBEiJ_G0013766.1 mouse_genomes_project 9 109306452 109311375 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092027.1 MGP_WSBEiJ_G0034203.1 mouse_genomes_project 9 83363388 83467124 + MGP_WSBEiJ_P0092027 Sh3bgrl2 protein_coding protein_coding MGP_WSBEiJ_T0092028.1 MGP_WSBEiJ_G0034203.1 mouse_genomes_project 9 83363390 83364074 + Sh3bgrl2 protein_coding retained_intron MGP_WSBEiJ_T0092029.1 MGP_WSBEiJ_G0034203.1 mouse_genomes_project 9 83363411 83466624 + MGP_WSBEiJ_P0092029 Sh3bgrl2 protein_coding protein_coding MGP_WSBEiJ_T0092030.1 MGP_WSBEiJ_G0034203.1 mouse_genomes_project 9 83363520 83419755 + MGP_WSBEiJ_P0092030 Sh3bgrl2 protein_coding protein_coding MGP_WSBEiJ_T0091631.1 MGP_WSBEiJ_G0034112.1 mouse_genomes_project 9 69283450 69290043 - MGP_WSBEiJ_P0091631 Gcnt3 protein_coding protein_coding MGP_WSBEiJ_T0002405.1 MGP_WSBEiJ_G0002321.1 mouse_genomes_project 9 104810586 104813564 - TEC TEC MGP_WSBEiJ_T0091452.1 MGP_WSBEiJ_G0034071.1 mouse_genomes_project 9 64366884 64380812 + MGP_WSBEiJ_P0091452 Pdcd7 protein_coding protein_coding MGP_WSBEiJ_T0010890.1 MGP_WSBEiJ_G0009047.1 mouse_genomes_project 9 66364810 66364877 - Mir190a miRNA miRNA MGP_WSBEiJ_T0092160.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90015334 90028987 + MGP_WSBEiJ_P0092160 Ctsh protein_coding protein_coding MGP_WSBEiJ_T0092161.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90015449 90039640 + MGP_WSBEiJ_P0092161 Ctsh protein_coding protein_coding MGP_WSBEiJ_T0092162.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90015688 90039638 + Ctsh protein_coding retained_intron MGP_WSBEiJ_T0092163.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90015703 90016525 + Ctsh protein_coding retained_intron MGP_WSBEiJ_T0092164.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90015719 90027804 + MGP_WSBEiJ_P0092164 Ctsh protein_coding protein_coding MGP_WSBEiJ_T0092165.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90015720 90039638 + MGP_WSBEiJ_P0092165 Ctsh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092166.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90015736 90030907 + Ctsh protein_coding retained_intron MGP_WSBEiJ_T0092167.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90015741 90039292 + MGP_WSBEiJ_P0092167 Ctsh protein_coding protein_coding MGP_WSBEiJ_T0092168.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90021225 90022695 + Ctsh protein_coding retained_intron MGP_WSBEiJ_T0092169.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90026089 90035448 + Ctsh protein_coding retained_intron MGP_WSBEiJ_T0092170.1 MGP_WSBEiJ_G0034235.1 mouse_genomes_project 9 90035258 90039300 + Ctsh protein_coding retained_intron MGP_WSBEiJ_T0090234.1 MGP_WSBEiJ_G0033643.1 mouse_genomes_project 9 29723424 29750141 + MGP_WSBEiJ_P0090234 Kcnj1 protein_coding protein_coding MGP_WSBEiJ_T0090235.1 MGP_WSBEiJ_G0033643.1 mouse_genomes_project 9 29744932 29750141 + MGP_WSBEiJ_P0090235 Kcnj1 protein_coding protein_coding MGP_WSBEiJ_T0017948.1 MGP_WSBEiJ_G0015165.1 mouse_genomes_project 9 77137568 77139077 + Gm19569 processed_transcript lincRNA MGP_WSBEiJ_T0017949.1 MGP_WSBEiJ_G0015165.1 mouse_genomes_project 9 77137811 77139077 + Gm19569 processed_transcript retained_intron MGP_WSBEiJ_T0017938.1 MGP_WSBEiJ_G0015162.1 mouse_genomes_project 9 71773636 71783168 + Gm27230 processed_transcript lincRNA MGP_WSBEiJ_T0017939.1 MGP_WSBEiJ_G0015162.1 mouse_genomes_project 9 71773642 71781407 + Gm27230 processed_transcript lincRNA MGP_WSBEiJ_T0017940.1 MGP_WSBEiJ_G0015162.1 mouse_genomes_project 9 71782075 71782749 + Gm27230 processed_transcript retained_intron MGP_WSBEiJ_T0098597.1 MGP_WSBEiJ_G0037260.1 mouse_genomes_project 9 44865391 44865498 - Gm22805 snRNA snRNA MGP_WSBEiJ_T0010864.1 MGP_WSBEiJ_G0009021.1 mouse_genomes_project 9 19098493 19098563 - Mir7084 miRNA miRNA MGP_WSBEiJ_T0017900.1 MGP_WSBEiJ_G0015151.1 mouse_genomes_project 9 32506318 32521742 + 4930581F22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017901.1 MGP_WSBEiJ_G0015151.1 mouse_genomes_project 9 32506357 32509092 + 4930581F22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017902.1 MGP_WSBEiJ_G0015151.1 mouse_genomes_project 9 32508236 32514462 + 4930581F22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017903.1 MGP_WSBEiJ_G0015151.1 mouse_genomes_project 9 32508803 32517212 + 4930581F22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017904.1 MGP_WSBEiJ_G0015151.1 mouse_genomes_project 9 32508887 32514890 + 4930581F22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017905.1 MGP_WSBEiJ_G0015151.1 mouse_genomes_project 9 32509017 32517719 + 4930581F22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0091331.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61218271 61256710 + Anp32a protein_coding processed_transcript MGP_WSBEiJ_T0091332.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61218307 61258576 + MGP_WSBEiJ_P0091332 Anp32a protein_coding protein_coding MGP_WSBEiJ_T0091333.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61218879 61253749 + MGP_WSBEiJ_P0091333 Anp32a protein_coding protein_coding MGP_WSBEiJ_T0091334.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61219052 61256681 + MGP_WSBEiJ_P0091334 Anp32a protein_coding protein_coding MGP_WSBEiJ_T0091335.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61219441 61252614 + MGP_WSBEiJ_P0091335 Anp32a protein_coding protein_coding MGP_WSBEiJ_T0091336.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61221040 61252627 + Anp32a protein_coding processed_transcript MGP_WSBEiJ_T0091337.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61221772 61253746 + Anp32a protein_coding processed_transcript MGP_WSBEiJ_T0091338.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61246078 61252707 + Anp32a protein_coding processed_transcript MGP_WSBEiJ_T0091339.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61246084 61256316 + Anp32a protein_coding processed_transcript MGP_WSBEiJ_T0091340.1 MGP_WSBEiJ_G0034037.1 mouse_genomes_project 9 61252469 61257544 + Anp32a protein_coding retained_intron MGP_WSBEiJ_T0010869.1 MGP_WSBEiJ_G0009026.1 mouse_genomes_project 9 39482755 39482851 + Mirlet7a-2 miRNA miRNA MGP_WSBEiJ_T0015598.1 MGP_WSBEiJ_G0013728.1 mouse_genomes_project 9 93047399 93047706 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093117.1 MGP_WSBEiJ_G0034410.1 mouse_genomes_project 9 109128166 109147374 + MGP_WSBEiJ_P0093117 1700102P08Rik protein_coding protein_coding MGP_WSBEiJ_T0093118.1 MGP_WSBEiJ_G0034410.1 mouse_genomes_project 9 109128195 109133128 + MGP_WSBEiJ_P0093118 1700102P08Rik protein_coding protein_coding MGP_WSBEiJ_T0099839.1 MGP_WSBEiJ_G0038502.1 mouse_genomes_project 9 22615002 22615111 - Gm25861 snoRNA snoRNA MGP_WSBEiJ_T0090686.1 MGP_WSBEiJ_G0033837.1 mouse_genomes_project 9 42922502 42927969 - Tmem25 protein_coding processed_transcript MGP_WSBEiJ_T0090687.1 MGP_WSBEiJ_G0033837.1 mouse_genomes_project 9 42922502 42928034 - MGP_WSBEiJ_P0090687 Tmem25 protein_coding protein_coding MGP_WSBEiJ_T0090688.1 MGP_WSBEiJ_G0033837.1 mouse_genomes_project 9 42922502 42927969 - MGP_WSBEiJ_P0090688 Tmem25 protein_coding protein_coding MGP_WSBEiJ_T0093194.1 MGP_WSBEiJ_G0034419.1 mouse_genomes_project 9 109306204 109311440 + MGP_WSBEiJ_P0093194 Impdh2 protein_coding protein_coding MGP_WSBEiJ_T0093195.1 MGP_WSBEiJ_G0034419.1 mouse_genomes_project 9 109306357 109309192 + MGP_WSBEiJ_P0093195 Impdh2 protein_coding protein_coding MGP_WSBEiJ_T0093196.1 MGP_WSBEiJ_G0034419.1 mouse_genomes_project 9 109306388 109307554 + Impdh2 protein_coding retained_intron MGP_WSBEiJ_T0093197.1 MGP_WSBEiJ_G0034419.1 mouse_genomes_project 9 109306398 109308228 + Impdh2 protein_coding retained_intron MGP_WSBEiJ_T0093198.1 MGP_WSBEiJ_G0034419.1 mouse_genomes_project 9 109308990 109311250 + MGP_WSBEiJ_P0093198 Impdh2 protein_coding protein_coding MGP_WSBEiJ_T0093199.1 MGP_WSBEiJ_G0034419.1 mouse_genomes_project 9 109309124 109310026 + Impdh2 protein_coding retained_intron MGP_WSBEiJ_T0093200.1 MGP_WSBEiJ_G0034419.1 mouse_genomes_project 9 109311055 109311425 + Impdh2 protein_coding retained_intron MGP_WSBEiJ_T0093201.1 MGP_WSBEiJ_G0034419.1 mouse_genomes_project 9 109311059 109311420 + Impdh2 protein_coding retained_intron MGP_WSBEiJ_T0010849.1 MGP_WSBEiJ_G0009006.1 mouse_genomes_project 9 4635231 4635282 + Mir5618 miRNA miRNA MGP_WSBEiJ_T0090349.1 MGP_WSBEiJ_G0033677.1 mouse_genomes_project 9 34326803 34358080 + MGP_WSBEiJ_P0090349 Fez1 protein_coding protein_coding MGP_WSBEiJ_T0090350.1 MGP_WSBEiJ_G0033677.1 mouse_genomes_project 9 34337593 34389011 + MGP_WSBEiJ_P0090350 Fez1 protein_coding protein_coding MGP_WSBEiJ_T0090351.1 MGP_WSBEiJ_G0033677.1 mouse_genomes_project 9 34338522 34371186 + MGP_WSBEiJ_P0090351 Fez1 protein_coding protein_coding MGP_WSBEiJ_T0090352.1 MGP_WSBEiJ_G0033677.1 mouse_genomes_project 9 34349776 34388727 + MGP_WSBEiJ_P0090352 Fez1 protein_coding protein_coding MGP_WSBEiJ_T0090353.1 MGP_WSBEiJ_G0033677.1 mouse_genomes_project 9 34349895 34375982 + MGP_WSBEiJ_P0090353 Fez1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090354.1 MGP_WSBEiJ_G0033677.1 mouse_genomes_project 9 34377079 34380791 + MGP_WSBEiJ_P0090354 Fez1 protein_coding protein_coding MGP_WSBEiJ_T0090355.1 MGP_WSBEiJ_G0033677.1 mouse_genomes_project 9 34378304 34388887 + Fez1 protein_coding retained_intron MGP_WSBEiJ_T0090356.1 MGP_WSBEiJ_G0033677.1 mouse_genomes_project 9 34378704 34389007 + MGP_WSBEiJ_P0090356 Fez1 protein_coding protein_coding MGP_WSBEiJ_T0093790.1 MGP_WSBEiJ_G0034546.1 mouse_genomes_project 9 122203711 122208355 + MGP_WSBEiJ_P0093790 Rpl14 protein_coding protein_coding MGP_WSBEiJ_T0017952.1 MGP_WSBEiJ_G0015168.1 mouse_genomes_project 9 82956535 82957985 + Gm29054 processed_transcript TEC MGP_WSBEiJ_T0017953.1 MGP_WSBEiJ_G0015168.1 mouse_genomes_project 9 82956566 82957902 + Gm29054 processed_transcript antisense MGP_WSBEiJ_T0093731.1 MGP_WSBEiJ_G0034521.1 mouse_genomes_project 9 120680439 120687835 - MGP_WSBEiJ_P0093731 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099856.1 MGP_WSBEiJ_G0038519.1 mouse_genomes_project 9 63131498 63131566 + Gm23344 snoRNA snoRNA MGP_WSBEiJ_T0010858.1 MGP_WSBEiJ_G0009015.1 mouse_genomes_project 9 17788821 17788896 - Mir7081 miRNA miRNA MGP_WSBEiJ_T0015535.1 MGP_WSBEiJ_G0013665.1 mouse_genomes_project 9 58519502 58519994 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092233.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95567113 95625620 - MGP_WSBEiJ_P0092233 U2surp protein_coding protein_coding MGP_WSBEiJ_T0092234.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95571193 95625722 - MGP_WSBEiJ_P0092234 U2surp protein_coding protein_coding MGP_WSBEiJ_T0092235.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95571573 95625721 - MGP_WSBEiJ_P0092235 U2surp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092236.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95571624 95625587 - MGP_WSBEiJ_P0092236 U2surp protein_coding unknown_likely_coding MGP_WSBEiJ_T0092237.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95590153 95596040 - U2surp protein_coding retained_intron MGP_WSBEiJ_T0092238.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95607050 95625585 - MGP_WSBEiJ_P0092238 U2surp protein_coding protein_coding MGP_WSBEiJ_T0092239.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95607433 95625582 - MGP_WSBEiJ_P0092239 U2surp protein_coding protein_coding MGP_WSBEiJ_T0092240.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95615694 95625611 - U2surp protein_coding retained_intron MGP_WSBEiJ_T0092241.1 MGP_WSBEiJ_G0034250.1 mouse_genomes_project 9 95622759 95625605 - U2surp protein_coding retained_intron MGP_WSBEiJ_T0002420.1 MGP_WSBEiJ_G0002336.1 mouse_genomes_project 9 110395686 110397461 + TEC TEC MGP_WSBEiJ_T0092513.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103677219 103704482 - MGP_WSBEiJ_P0092513 Trf protein_coding protein_coding MGP_WSBEiJ_T0092514.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103682190 103704653 - MGP_WSBEiJ_P0092514 Trf protein_coding protein_coding MGP_WSBEiJ_T0092515.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103682420 103685347 - Trf protein_coding retained_intron MGP_WSBEiJ_T0092516.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103683910 103693252 - MGP_WSBEiJ_P0092516 Trf protein_coding protein_coding MGP_WSBEiJ_T0092517.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103683978 103695457 - MGP_WSBEiJ_P0092517 Trf protein_coding protein_coding MGP_WSBEiJ_T0092518.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103689179 103704479 - MGP_WSBEiJ_P0092518 Trf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092519.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103694280 103696075 - Trf protein_coding retained_intron MGP_WSBEiJ_T0092520.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103695490 103704475 - MGP_WSBEiJ_P0092520 Trf protein_coding protein_coding MGP_WSBEiJ_T0092521.1 MGP_WSBEiJ_G0034311.1 mouse_genomes_project 9 103696484 103702650 - MGP_WSBEiJ_P0092521 Trf protein_coding protein_coding MGP_WSBEiJ_T0091913.1 MGP_WSBEiJ_G0034177.1 mouse_genomes_project 9 77888577 77908030 + MGP_WSBEiJ_P0091913 protein_coding protein_coding MGP_WSBEiJ_T0091915.1 MGP_WSBEiJ_G0034177.1 mouse_genomes_project 9 77890179 77904749 + protein_coding processed_transcript MGP_WSBEiJ_T0097482.1 MGP_WSBEiJ_G0036150.1 mouse_genomes_project 9 109124435 109125566 + Gm37963 sense_intronic sense_intronic MGP_WSBEiJ_T0009072.1 MGP_WSBEiJ_G0007299.1 mouse_genomes_project 9 31405527 31423258 + 7630403G23Rik lincRNA lincRNA MGP_WSBEiJ_T0090085.1 MGP_WSBEiJ_G0033588.1 mouse_genomes_project 9 18912829 18917489 + MGP_WSBEiJ_P0090085 Swsap1 protein_coding protein_coding MGP_WSBEiJ_T0093916.1 MGP_WSBEiJ_G0034585.1 mouse_genomes_project 9 125139977 125235117 + MGP_WSBEiJ_P0093916 Lars2 protein_coding protein_coding MGP_WSBEiJ_T0005381.1 MGP_WSBEiJ_G0004549.1 mouse_genomes_project 9 58716107 58724806 + Gm7616 antisense antisense MGP_WSBEiJ_T0093712.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120579471 120599536 + Vill protein_coding retained_intron MGP_WSBEiJ_T0093713.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120579471 120584749 + Vill protein_coding retained_intron MGP_WSBEiJ_T0093714.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120579471 120599530 + MGP_WSBEiJ_P0093714 Vill protein_coding protein_coding MGP_WSBEiJ_T0093715.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120579495 120599337 + MGP_WSBEiJ_P0093715 Vill protein_coding protein_coding MGP_WSBEiJ_T0093716.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120579558 120585120 + MGP_WSBEiJ_P0093716 Vill protein_coding protein_coding MGP_WSBEiJ_T0093717.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120590141 120599337 + MGP_WSBEiJ_P0093717 Vill protein_coding protein_coding MGP_WSBEiJ_T0093718.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120590147 120599348 + MGP_WSBEiJ_P0093718 Vill protein_coding protein_coding MGP_WSBEiJ_T0093719.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120590148 120596759 + MGP_WSBEiJ_P0093719 Vill protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093720.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120590151 120593509 + MGP_WSBEiJ_P0093720 Vill protein_coding protein_coding MGP_WSBEiJ_T0093721.1 MGP_WSBEiJ_G0034518.1 mouse_genomes_project 9 120590175 120592037 + Vill protein_coding processed_transcript MGP_WSBEiJ_T0093579.1 MGP_WSBEiJ_G0034483.1 mouse_genomes_project 9 112285856 112293017 + MGP_WSBEiJ_P0093579 Epm2aip1 protein_coding protein_coding MGP_WSBEiJ_T0093580.1 MGP_WSBEiJ_G0034483.1 mouse_genomes_project 9 112285872 112293021 + MGP_WSBEiJ_P0093580 Epm2aip1 protein_coding protein_coding MGP_WSBEiJ_T0093581.1 MGP_WSBEiJ_G0034483.1 mouse_genomes_project 9 112288029 112291469 + Epm2aip1 protein_coding processed_transcript MGP_WSBEiJ_T0090890.1 MGP_WSBEiJ_G0033906.1 mouse_genomes_project 9 49134075 49135358 - MGP_WSBEiJ_P0090890 Hspb2 protein_coding protein_coding MGP_WSBEiJ_T0098594.1 MGP_WSBEiJ_G0037257.1 mouse_genomes_project 9 43033376 43033494 + Gm26249 snRNA snRNA MGP_WSBEiJ_T0090492.1 MGP_WSBEiJ_G0033771.1 mouse_genomes_project 9 37764707 37765640 - MGP_WSBEiJ_P0090492 Olfr975 protein_coding protein_coding MGP_WSBEiJ_T0093059.1 MGP_WSBEiJ_G0034399.1 mouse_genomes_project 9 108759319 108761867 + MGP_WSBEiJ_P0093059 Amigo3 protein_coding protein_coding MGP_WSBEiJ_T0096869.1 MGP_WSBEiJ_G0035550.1 mouse_genomes_project 9 37475666 37476569 - pseudogene pseudogene MGP_WSBEiJ_T0091638.1 MGP_WSBEiJ_G0034116.1 mouse_genomes_project 9 69708007 69791100 - MGP_WSBEiJ_P0091638 Rnf111 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091639.1 MGP_WSBEiJ_G0034116.1 mouse_genomes_project 9 69708014 69791054 - MGP_WSBEiJ_P0091639 Rnf111 protein_coding protein_coding MGP_WSBEiJ_T0091640.1 MGP_WSBEiJ_G0034116.1 mouse_genomes_project 9 69708015 69790685 - MGP_WSBEiJ_P0091640 Rnf111 protein_coding protein_coding MGP_WSBEiJ_T0009093.1 MGP_WSBEiJ_G0007315.1 mouse_genomes_project 9 47381530 47385658 - 1700042D02Rik lincRNA lincRNA MGP_WSBEiJ_T0092695.1 MGP_WSBEiJ_G0034343.1 mouse_genomes_project 9 107070623 107072411 + MGP_WSBEiJ_P0092695 protein_coding protein_coding MGP_WSBEiJ_T0017982.1 MGP_WSBEiJ_G0015179.1 mouse_genomes_project 9 109594333 109595494 - Gm35025 processed_transcript lincRNA MGP_WSBEiJ_T0017983.1 MGP_WSBEiJ_G0015179.1 mouse_genomes_project 9 109594465 109595215 - Gm35025 processed_transcript lincRNA MGP_WSBEiJ_T0017984.1 MGP_WSBEiJ_G0015179.1 mouse_genomes_project 9 109594562 109595257 - Gm35025 processed_transcript TEC MGP_WSBEiJ_T0093424.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111051448 111087997 + MGP_WSBEiJ_P0093424 Smarcc1 protein_coding protein_coding MGP_WSBEiJ_T0093425.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111069246 111188282 + MGP_WSBEiJ_P0093425 Smarcc1 protein_coding protein_coding MGP_WSBEiJ_T0093426.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111069303 111158729 + Smarcc1 protein_coding retained_intron MGP_WSBEiJ_T0093427.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111069303 111126561 + MGP_WSBEiJ_P0093427 Smarcc1 protein_coding protein_coding MGP_WSBEiJ_T0093428.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111069303 111188282 + MGP_WSBEiJ_P0093428 Smarcc1 protein_coding protein_coding MGP_WSBEiJ_T0093429.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111069303 111176974 + MGP_WSBEiJ_P0093429 Smarcc1 protein_coding protein_coding MGP_WSBEiJ_T0093430.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111127989 111151038 + Smarcc1 protein_coding retained_intron MGP_WSBEiJ_T0093431.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111176590 111179231 + MGP_WSBEiJ_P0093431 Smarcc1 protein_coding protein_coding MGP_WSBEiJ_T0093432.1 MGP_WSBEiJ_G0034453.1 mouse_genomes_project 9 111178224 111179222 + Smarcc1 protein_coding retained_intron MGP_WSBEiJ_T0100165.1 MGP_WSBEiJ_G0038740.1 mouse_genomes_project 9 107963245 107964128 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100166.1 MGP_WSBEiJ_G0038740.1 mouse_genomes_project 9 107963814 107967952 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0091669.1 MGP_WSBEiJ_G0034126.1 mouse_genomes_project 9 70848098 70938063 - Myzap protein_coding retained_intron MGP_WSBEiJ_T0091670.1 MGP_WSBEiJ_G0034126.1 mouse_genomes_project 9 70848098 70938063 - MGP_WSBEiJ_P0091670 Myzap protein_coding protein_coding MGP_WSBEiJ_T0091671.1 MGP_WSBEiJ_G0034126.1 mouse_genomes_project 9 70848810 70937968 - MGP_WSBEiJ_P0091671 Myzap protein_coding protein_coding MGP_WSBEiJ_T0091672.1 MGP_WSBEiJ_G0034126.1 mouse_genomes_project 9 70905544 70924345 - MGP_WSBEiJ_P0091672 Myzap protein_coding protein_coding MGP_WSBEiJ_T0091673.1 MGP_WSBEiJ_G0034126.1 mouse_genomes_project 9 70908998 70938045 - MGP_WSBEiJ_P0091673 Myzap protein_coding protein_coding MGP_WSBEiJ_T0092734.1 MGP_WSBEiJ_G0034349.1 mouse_genomes_project 9 107115439 107122094 - MGP_WSBEiJ_P0092734 Parp3 protein_coding protein_coding MGP_WSBEiJ_T0092735.1 MGP_WSBEiJ_G0034349.1 mouse_genomes_project 9 107115741 107121521 - MGP_WSBEiJ_P0092735 Parp3 protein_coding protein_coding MGP_WSBEiJ_T0092736.1 MGP_WSBEiJ_G0034349.1 mouse_genomes_project 9 107116103 107121314 - Parp3 protein_coding retained_intron MGP_WSBEiJ_T0092737.1 MGP_WSBEiJ_G0034349.1 mouse_genomes_project 9 107116103 107121814 - MGP_WSBEiJ_P0092737 Parp3 protein_coding protein_coding MGP_WSBEiJ_T0092738.1 MGP_WSBEiJ_G0034349.1 mouse_genomes_project 9 107116109 107117139 - Parp3 protein_coding retained_intron MGP_WSBEiJ_T0092739.1 MGP_WSBEiJ_G0034349.1 mouse_genomes_project 9 107119536 107121249 - MGP_WSBEiJ_P0092739 Parp3 protein_coding protein_coding MGP_WSBEiJ_T0092740.1 MGP_WSBEiJ_G0034349.1 mouse_genomes_project 9 107119743 107121741 - Parp3 protein_coding retained_intron MGP_WSBEiJ_T0092741.1 MGP_WSBEiJ_G0034349.1 mouse_genomes_project 9 107119773 107121540 - MGP_WSBEiJ_P0092741 Parp3 protein_coding protein_coding MGP_WSBEiJ_T0091637.1 MGP_WSBEiJ_G0034115.1 mouse_genomes_project 9 69688103 69704140 - MGP_WSBEiJ_P0091637 Ccnb2 protein_coding protein_coding MGP_WSBEiJ_T0098625.1 MGP_WSBEiJ_G0037288.1 mouse_genomes_project 9 84511528 84511692 + Gm26126 snRNA snRNA MGP_WSBEiJ_T0002385.1 MGP_WSBEiJ_G0002301.1 mouse_genomes_project 9 101259777 101262805 + TEC TEC MGP_WSBEiJ_T0091406.1 MGP_WSBEiJ_G0034056.1 mouse_genomes_project 9 63194128 63196590 + MGP_WSBEiJ_P0091406 Uchl4 protein_coding protein_coding MGP_WSBEiJ_T0093779.1 MGP_WSBEiJ_G0034542.1 mouse_genomes_project 9 121754509 121774002 + MGP_WSBEiJ_P0093779 Mobp protein_coding protein_coding MGP_WSBEiJ_T0093780.1 MGP_WSBEiJ_G0034542.1 mouse_genomes_project 9 121754509 121780713 + MGP_WSBEiJ_P0093780 Mobp protein_coding protein_coding MGP_WSBEiJ_T0093781.1 MGP_WSBEiJ_G0034542.1 mouse_genomes_project 9 121754509 121786106 + MGP_WSBEiJ_P0093781 Mobp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093782.1 MGP_WSBEiJ_G0034542.1 mouse_genomes_project 9 121754509 121780713 + MGP_WSBEiJ_P0093782 Mobp protein_coding protein_coding MGP_WSBEiJ_T0093512.1 MGP_WSBEiJ_G0034467.1 mouse_genomes_project 9 111775811 111781414 + MGP_WSBEiJ_P0093512 Prss42 protein_coding protein_coding MGP_WSBEiJ_T0005395.1 MGP_WSBEiJ_G0004559.1 mouse_genomes_project 9 72004119 72008336 - Gm27241 antisense antisense MGP_WSBEiJ_T0005396.1 MGP_WSBEiJ_G0004559.1 mouse_genomes_project 9 72004253 72008508 - Gm27241 antisense antisense MGP_WSBEiJ_T0090447.1 MGP_WSBEiJ_G0033732.1 mouse_genomes_project 9 36447483 36448615 + MGP_WSBEiJ_P0090447 Olfr922 protein_coding protein_coding MGP_WSBEiJ_T0017950.1 MGP_WSBEiJ_G0015166.1 mouse_genomes_project 9 79551562 79561157 + 4930429F24Rik processed_transcript processed_transcript MGP_WSBEiJ_T0090732.1 MGP_WSBEiJ_G0033854.1 mouse_genomes_project 9 43475266 43505088 + MGP_WSBEiJ_P0090732 Tmprss13 protein_coding protein_coding MGP_WSBEiJ_T0002341.1 MGP_WSBEiJ_G0002258.1 mouse_genomes_project 9 72976592 72978620 - TEC TEC MGP_WSBEiJ_T0090402.1 MGP_WSBEiJ_G0033694.1 mouse_genomes_project 9 35351085 35391595 + MGP_WSBEiJ_P0090402 protein_coding protein_coding MGP_WSBEiJ_T0091358.1 MGP_WSBEiJ_G0034044.1 mouse_genomes_project 9 62049965 62060765 - MGP_WSBEiJ_P0091358 Skor1 protein_coding protein_coding MGP_WSBEiJ_T0091359.1 MGP_WSBEiJ_G0034044.1 mouse_genomes_project 9 62049965 62058815 - MGP_WSBEiJ_P0091359 Skor1 protein_coding protein_coding MGP_WSBEiJ_T0091360.1 MGP_WSBEiJ_G0034044.1 mouse_genomes_project 9 62049971 62058784 - MGP_WSBEiJ_P0091360 Skor1 protein_coding protein_coding MGP_WSBEiJ_T0010886.1 MGP_WSBEiJ_G0009043.1 mouse_genomes_project 9 61107612 61107717 - Gm25603 miRNA miRNA MGP_WSBEiJ_T0015579.1 MGP_WSBEiJ_G0013709.1 mouse_genomes_project 9 85702515 85703323 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000318.1 MGP_WSBEiJ_G0000266.1 mouse_genomes_project 9 124864685 124864756 + mt-Tn Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0009123.1 MGP_WSBEiJ_G0007340.1 mouse_genomes_project 9 74306714 74309189 - Gm28182 lincRNA lincRNA MGP_WSBEiJ_T0090968.1 MGP_WSBEiJ_G0033929.1 mouse_genomes_project 9 52013310 52051438 + MGP_WSBEiJ_P0090968 Npat protein_coding protein_coding MGP_WSBEiJ_T0090969.1 MGP_WSBEiJ_G0033929.1 mouse_genomes_project 9 52013415 52049744 + MGP_WSBEiJ_P0090969 Npat protein_coding unknown_likely_coding MGP_WSBEiJ_T0090970.1 MGP_WSBEiJ_G0033929.1 mouse_genomes_project 9 52040688 52044336 + Npat protein_coding retained_intron MGP_WSBEiJ_T0015559.1 MGP_WSBEiJ_G0013689.1 mouse_genomes_project 9 76230686 76231062 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091848.1 MGP_WSBEiJ_G0034159.1 mouse_genomes_project 9 75126149 75138284 + MGP_WSBEiJ_P0091848 Lysmd2 protein_coding protein_coding MGP_WSBEiJ_T0089721.1 MGP_WSBEiJ_G0033450.1 mouse_genomes_project 9 4403631 4413690 + MGP_WSBEiJ_P0089721 Mmp8 protein_coding protein_coding MGP_WSBEiJ_T0002404.1 MGP_WSBEiJ_G0002320.1 mouse_genomes_project 9 104768606 104770119 + TEC TEC MGP_WSBEiJ_T0089725.1 MGP_WSBEiJ_G0033452.1 mouse_genomes_project 9 4467823 4517476 + MGP_WSBEiJ_P0089725 Mmp20 protein_coding protein_coding MGP_WSBEiJ_T0092872.1 MGP_WSBEiJ_G0034376.1 mouse_genomes_project 9 108262447 108267092 + MGP_WSBEiJ_P0092872 Nat6 protein_coding protein_coding MGP_WSBEiJ_T0092873.1 MGP_WSBEiJ_G0034376.1 mouse_genomes_project 9 108262447 108267092 + MGP_WSBEiJ_P0092873 Nat6 protein_coding protein_coding MGP_WSBEiJ_T0092874.1 MGP_WSBEiJ_G0034376.1 mouse_genomes_project 9 108262447 108267092 + MGP_WSBEiJ_P0092874 Nat6 protein_coding protein_coding MGP_WSBEiJ_T0092875.1 MGP_WSBEiJ_G0034376.1 mouse_genomes_project 9 108262447 108267092 + MGP_WSBEiJ_P0092875 Nat6 protein_coding protein_coding MGP_WSBEiJ_T0092876.1 MGP_WSBEiJ_G0034376.1 mouse_genomes_project 9 108262447 108267092 + MGP_WSBEiJ_P0092876 Nat6 protein_coding protein_coding MGP_WSBEiJ_T0092877.1 MGP_WSBEiJ_G0034376.1 mouse_genomes_project 9 108262447 108267092 + MGP_WSBEiJ_P0092877 Nat6 protein_coding protein_coding MGP_WSBEiJ_T0092879.1 MGP_WSBEiJ_G0034376.1 mouse_genomes_project 9 108263680 108267623 + MGP_WSBEiJ_P0092879 Nat6 protein_coding protein_coding MGP_WSBEiJ_T0089700.1 MGP_WSBEiJ_G0033442.1 mouse_genomes_project 9 3083594 3085114 - MGP_WSBEiJ_P0089700 Ddi1 protein_coding protein_coding MGP_WSBEiJ_T0005414.1 MGP_WSBEiJ_G0004573.1 mouse_genomes_project 9 95749319 95780906 - Gm16126 antisense antisense MGP_WSBEiJ_T0092131.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88400596 88436487 - MGP_WSBEiJ_P0092131 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0092132.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88403318 88435855 - MGP_WSBEiJ_P0092132 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0092133.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88406024 88434366 - MGP_WSBEiJ_P0092133 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0092134.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88406226 88435738 - MGP_WSBEiJ_P0092134 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0092135.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88406275 88435803 - MGP_WSBEiJ_P0092135 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0092136.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88407524 88435756 - MGP_WSBEiJ_P0092136 Syncrip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092137.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88409146 88436487 - MGP_WSBEiJ_P0092137 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0092138.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88409706 88434354 - MGP_WSBEiJ_P0092138 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0092139.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88418067 88434345 - Syncrip protein_coding retained_intron MGP_WSBEiJ_T0092140.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88430461 88434770 - MGP_WSBEiJ_P0092140 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0092141.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88432323 88434825 - Syncrip protein_coding retained_intron MGP_WSBEiJ_T0092142.1 MGP_WSBEiJ_G0034225.1 mouse_genomes_project 9 88433262 88436487 - MGP_WSBEiJ_P0092142 Syncrip protein_coding protein_coding MGP_WSBEiJ_T0091652.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70420650 70477935 - MGP_WSBEiJ_P0091652 Aqp9 protein_coding protein_coding MGP_WSBEiJ_T0091653.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70420652 70477906 - MGP_WSBEiJ_P0091653 Aqp9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091654.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70420653 70477279 - MGP_WSBEiJ_P0091654 Aqp9 protein_coding protein_coding MGP_WSBEiJ_T0091655.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70421835 70483962 - MGP_WSBEiJ_P0091655 Aqp9 protein_coding protein_coding MGP_WSBEiJ_T0091656.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70477618 70479941 - Aqp9 protein_coding processed_transcript MGP_WSBEiJ_T0091657.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70477674 70483199 - Aqp9 protein_coding processed_transcript MGP_WSBEiJ_T0091658.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70478119 70483987 - Aqp9 protein_coding processed_transcript MGP_WSBEiJ_T0091659.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70478119 70482939 - Aqp9 protein_coding processed_transcript MGP_WSBEiJ_T0091660.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70478120 70483982 - Aqp9 protein_coding processed_transcript MGP_WSBEiJ_T0091661.1 MGP_WSBEiJ_G0034122.1 mouse_genomes_project 9 70479855 70483155 - Aqp9 protein_coding processed_transcript MGP_WSBEiJ_T0098591.1 MGP_WSBEiJ_G0037254.1 mouse_genomes_project 9 39268987 39269093 - Gm25401 snRNA snRNA MGP_WSBEiJ_T0090264.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32597391 32604130 - MGP_WSBEiJ_P0090264 Foxred1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090265.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32597393 32604148 - Foxred1 protein_coding retained_intron MGP_WSBEiJ_T0090266.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32597393 32604164 - Foxred1 protein_coding retained_intron MGP_WSBEiJ_T0090267.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32597393 32604249 - MGP_WSBEiJ_P0090267 Foxred1 protein_coding protein_coding MGP_WSBEiJ_T0090268.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32597393 32604174 - MGP_WSBEiJ_P0090268 Foxred1 protein_coding protein_coding MGP_WSBEiJ_T0090269.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32597393 32604195 - MGP_WSBEiJ_P0090269 Foxred1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090270.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32598051 32599108 - Foxred1 protein_coding retained_intron MGP_WSBEiJ_T0090271.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32598370 32599420 - MGP_WSBEiJ_P0090271 Foxred1 protein_coding protein_coding MGP_WSBEiJ_T0090272.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32599272 32604140 - Foxred1 protein_coding retained_intron MGP_WSBEiJ_T0090273.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32599408 32604190 - MGP_WSBEiJ_P0090273 Foxred1 protein_coding protein_coding MGP_WSBEiJ_T0090274.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32600723 32604116 - MGP_WSBEiJ_P0090274 Foxred1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090275.1 MGP_WSBEiJ_G0033651.1 mouse_genomes_project 9 32600733 32604091 - MGP_WSBEiJ_P0090275 Foxred1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093652.1 MGP_WSBEiJ_G0034500.1 mouse_genomes_project 9 115862662 115921430 - MGP_WSBEiJ_P0093652 Cnot10 protein_coding protein_coding MGP_WSBEiJ_T0002378.1 MGP_WSBEiJ_G0002294.1 mouse_genomes_project 9 98962071 98962587 - TEC TEC MGP_WSBEiJ_T0089816.1 MGP_WSBEiJ_G0033479.1 mouse_genomes_project 9 11517418 11521248 - MGP_WSBEiJ_P0089816 Fut4 protein_coding protein_coding MGP_WSBEiJ_T0090795.1 MGP_WSBEiJ_G0033871.1 mouse_genomes_project 9 44486190 44498103 + Bud13 protein_coding retained_intron MGP_WSBEiJ_T0090796.1 MGP_WSBEiJ_G0033871.1 mouse_genomes_project 9 44486190 44502784 + MGP_WSBEiJ_P0090796 Bud13 protein_coding protein_coding MGP_WSBEiJ_T0090797.1 MGP_WSBEiJ_G0033871.1 mouse_genomes_project 9 44491754 44502784 + MGP_WSBEiJ_P0090797 Bud13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090798.1 MGP_WSBEiJ_G0033871.1 mouse_genomes_project 9 44491776 44494541 + Bud13 protein_coding retained_intron MGP_WSBEiJ_T0010853.1 MGP_WSBEiJ_G0009010.1 mouse_genomes_project 9 10349144 10349254 + Gm22643 miRNA miRNA MGP_WSBEiJ_T0091474.1 MGP_WSBEiJ_G0034081.1 mouse_genomes_project 9 64680384 64710926 + MGP_WSBEiJ_P0091474 Rbpms2 protein_coding protein_coding MGP_WSBEiJ_T0091475.1 MGP_WSBEiJ_G0034081.1 mouse_genomes_project 9 64681297 64710903 + MGP_WSBEiJ_P0091475 Rbpms2 protein_coding protein_coding MGP_WSBEiJ_T0090697.1 MGP_WSBEiJ_G0033841.1 mouse_genomes_project 9 43061006 43104808 - MGP_WSBEiJ_P0090697 Ube4a protein_coding protein_coding MGP_WSBEiJ_T0090698.1 MGP_WSBEiJ_G0033841.1 mouse_genomes_project 9 43063723 43104848 - MGP_WSBEiJ_P0090698 Ube4a protein_coding protein_coding MGP_WSBEiJ_T0090699.1 MGP_WSBEiJ_G0033841.1 mouse_genomes_project 9 43071565 43104767 - MGP_WSBEiJ_P0090699 Ube4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090700.1 MGP_WSBEiJ_G0033841.1 mouse_genomes_project 9 43071665 43104773 - MGP_WSBEiJ_P0090700 Ube4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090701.1 MGP_WSBEiJ_G0033841.1 mouse_genomes_project 9 43085277 43104805 - Ube4a protein_coding retained_intron MGP_WSBEiJ_T0090702.1 MGP_WSBEiJ_G0033841.1 mouse_genomes_project 9 43092195 43104802 - MGP_WSBEiJ_P0090702 Ube4a protein_coding protein_coding MGP_WSBEiJ_T0090703.1 MGP_WSBEiJ_G0033841.1 mouse_genomes_project 9 43095530 43104784 - Ube4a protein_coding retained_intron MGP_WSBEiJ_T0015538.1 MGP_WSBEiJ_G0013668.1 mouse_genomes_project 9 62359301 62360211 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090720.1 MGP_WSBEiJ_G0033851.1 mouse_genomes_project 9 43322280 43356069 - MGP_WSBEiJ_P0090720 Tmprss4 protein_coding protein_coding MGP_WSBEiJ_T0090721.1 MGP_WSBEiJ_G0033851.1 mouse_genomes_project 9 43322281 43356067 - MGP_WSBEiJ_P0090721 Tmprss4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090722.1 MGP_WSBEiJ_G0033851.1 mouse_genomes_project 9 43322859 43356037 - Tmprss4 protein_coding processed_transcript MGP_WSBEiJ_T0090723.1 MGP_WSBEiJ_G0033851.1 mouse_genomes_project 9 43322859 43355953 - MGP_WSBEiJ_P0090723 Tmprss4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090724.1 MGP_WSBEiJ_G0033851.1 mouse_genomes_project 9 43324351 43330190 - Tmprss4 protein_coding retained_intron MGP_WSBEiJ_T0091927.1 MGP_WSBEiJ_G0034182.1 mouse_genomes_project 9 78071629 78074249 - MGP_WSBEiJ_P0091927 Ooep protein_coding protein_coding MGP_WSBEiJ_T0091989.1 MGP_WSBEiJ_G0034198.1 mouse_genomes_project 9 81653154 82002192 + MGP_WSBEiJ_P0091989 Mei4 protein_coding protein_coding MGP_WSBEiJ_T0091990.1 MGP_WSBEiJ_G0034198.1 mouse_genomes_project 9 81653326 81821750 + MGP_WSBEiJ_P0091990 Mei4 protein_coding protein_coding MGP_WSBEiJ_T0009159.1 MGP_WSBEiJ_G0007366.1 mouse_genomes_project 9 96704574 96711385 - lincRNA lincRNA MGP_WSBEiJ_T0091093.1 MGP_WSBEiJ_G0033972.1 mouse_genomes_project 9 55490537 55491461 + MGP_WSBEiJ_P0091093 Imp3 protein_coding protein_coding MGP_WSBEiJ_T0090818.1 MGP_WSBEiJ_G0033879.1 mouse_genomes_project 9 46794820 46801439 - MGP_WSBEiJ_P0090818 Rbm7 protein_coding protein_coding MGP_WSBEiJ_T0098624.1 MGP_WSBEiJ_G0037287.1 mouse_genomes_project 9 84032172 84032357 + Gm26146 snRNA snRNA MGP_WSBEiJ_T0091674.1 MGP_WSBEiJ_G0034127.1 mouse_genomes_project 9 70972244 71120563 - MGP_WSBEiJ_P0091674 Cgnl1 protein_coding protein_coding MGP_WSBEiJ_T0091675.1 MGP_WSBEiJ_G0034127.1 mouse_genomes_project 9 70972244 71120563 - MGP_WSBEiJ_P0091675 Cgnl1 protein_coding protein_coding MGP_WSBEiJ_T0091676.1 MGP_WSBEiJ_G0034127.1 mouse_genomes_project 9 70974586 70976833 - Cgnl1 protein_coding retained_intron MGP_WSBEiJ_T0091677.1 MGP_WSBEiJ_G0034127.1 mouse_genomes_project 9 70974938 71120521 - MGP_WSBEiJ_P0091677 Cgnl1 protein_coding protein_coding MGP_WSBEiJ_T0091678.1 MGP_WSBEiJ_G0034127.1 mouse_genomes_project 9 70976060 70977054 - Cgnl1 protein_coding retained_intron MGP_WSBEiJ_T0091679.1 MGP_WSBEiJ_G0034127.1 mouse_genomes_project 9 70978350 70994182 - Cgnl1 protein_coding processed_transcript MGP_WSBEiJ_T0099835.1 MGP_WSBEiJ_G0038498.1 mouse_genomes_project 9 17763450 17763535 + Gm24067 snoRNA snoRNA MGP_WSBEiJ_T0091486.1 MGP_WSBEiJ_G0034085.1 mouse_genomes_project 9 64954378 64967087 + MGP_WSBEiJ_P0091486 2810417H13Rik protein_coding protein_coding MGP_WSBEiJ_T0091487.1 MGP_WSBEiJ_G0034085.1 mouse_genomes_project 9 64954461 64958436 + 2810417H13Rik protein_coding retained_intron MGP_WSBEiJ_T0091488.1 MGP_WSBEiJ_G0034085.1 mouse_genomes_project 9 64954503 64957288 + 2810417H13Rik protein_coding retained_intron MGP_WSBEiJ_T0090849.1 MGP_WSBEiJ_G0033894.1 mouse_genomes_project 9 48862879 48877451 + MGP_WSBEiJ_P0090849 Plet1 protein_coding protein_coding MGP_WSBEiJ_T0090850.1 MGP_WSBEiJ_G0033894.1 mouse_genomes_project 9 48862881 48871676 + MGP_WSBEiJ_P0090850 Plet1 protein_coding protein_coding MGP_WSBEiJ_T0009163.1 MGP_WSBEiJ_G0007370.1 mouse_genomes_project 9 99005235 99076161 - E330023G01Rik lincRNA lincRNA MGP_WSBEiJ_T0089906.1 MGP_WSBEiJ_G0033520.1 mouse_genomes_project 9 16299794 16300733 + MGP_WSBEiJ_P0089906 Olfr849 protein_coding protein_coding MGP_WSBEiJ_T0009069.1 MGP_WSBEiJ_G0007296.1 mouse_genomes_project 9 30250890 30275521 - Gm27162 lincRNA lincRNA MGP_WSBEiJ_T0015634.1 MGP_WSBEiJ_G0013764.1 mouse_genomes_project 9 108876285 108876808 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005385.1 MGP_WSBEiJ_G0004552.1 mouse_genomes_project 9 65907529 65911719 - BC050972 antisense antisense MGP_WSBEiJ_T0005386.1 MGP_WSBEiJ_G0004552.1 mouse_genomes_project 9 65907762 65911419 - BC050972 antisense antisense MGP_WSBEiJ_T0005387.1 MGP_WSBEiJ_G0004552.1 mouse_genomes_project 9 65907791 65913221 - BC050972 antisense antisense MGP_WSBEiJ_T0093882.1 MGP_WSBEiJ_G0034572.1 mouse_genomes_project 9 124578692 124585088 - MGP_WSBEiJ_P0093882 Gm35549 protein_coding protein_coding MGP_WSBEiJ_T0093883.1 MGP_WSBEiJ_G0034572.1 mouse_genomes_project 9 124578692 124585088 - MGP_WSBEiJ_P0093883 Gm35549 protein_coding protein_coding MGP_WSBEiJ_T0093884.1 MGP_WSBEiJ_G0034572.1 mouse_genomes_project 9 124578692 124585088 - MGP_WSBEiJ_P0093884 Gm35549 protein_coding protein_coding MGP_WSBEiJ_T0091632.1 MGP_WSBEiJ_G0034113.1 mouse_genomes_project 9 69348329 69405253 - MGP_WSBEiJ_P0091632 Fam81a protein_coding protein_coding MGP_WSBEiJ_T0091633.1 MGP_WSBEiJ_G0034113.1 mouse_genomes_project 9 69361360 69361887 - Fam81a protein_coding retained_intron MGP_WSBEiJ_T0091634.1 MGP_WSBEiJ_G0034113.1 mouse_genomes_project 9 69387530 69405478 - MGP_WSBEiJ_P0091634 Fam81a protein_coding protein_coding MGP_WSBEiJ_T0091635.1 MGP_WSBEiJ_G0034113.1 mouse_genomes_project 9 69387561 69406185 - MGP_WSBEiJ_P0091635 Fam81a protein_coding protein_coding MGP_WSBEiJ_T0092365.1 MGP_WSBEiJ_G0034278.1 mouse_genomes_project 9 99264937 99281977 + MGP_WSBEiJ_P0092365 Faim protein_coding protein_coding MGP_WSBEiJ_T0092366.1 MGP_WSBEiJ_G0034278.1 mouse_genomes_project 9 99264950 99269213 + Faim protein_coding retained_intron MGP_WSBEiJ_T0092367.1 MGP_WSBEiJ_G0034278.1 mouse_genomes_project 9 99264956 99271789 + Faim protein_coding retained_intron MGP_WSBEiJ_T0092368.1 MGP_WSBEiJ_G0034278.1 mouse_genomes_project 9 99270381 99281961 + MGP_WSBEiJ_P0092368 Faim protein_coding protein_coding MGP_WSBEiJ_T0099832.1 MGP_WSBEiJ_G0038495.1 mouse_genomes_project 9 12137811 12137881 - Scarna9 snoRNA snoRNA MGP_WSBEiJ_T0005432.1 MGP_WSBEiJ_G0004582.1 mouse_genomes_project 9 98242563 98244913 + 4921534H16Rik antisense antisense MGP_WSBEiJ_T0005433.1 MGP_WSBEiJ_G0004582.1 mouse_genomes_project 9 98242563 98251306 + 4921534H16Rik antisense antisense MGP_WSBEiJ_T0100335.1 MGP_WSBEiJ_G0034511.1 mouse_genomes_project 9 119374542 119496467 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100336.1 MGP_WSBEiJ_G0034511.1 mouse_genomes_project 9 119410353 119496629 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100337.1 MGP_WSBEiJ_G0034511.1 mouse_genomes_project 9 119461110 119496629 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100338.1 MGP_WSBEiJ_G0034511.1 mouse_genomes_project 9 119495289 119525565 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0093948.1 MGP_WSBEiJ_G0034596.1 mouse_genomes_project 9 125724425 125725885 - MGP_WSBEiJ_P0093948 Ccr1l1 protein_coding protein_coding MGP_WSBEiJ_T0092242.1 MGP_WSBEiJ_G0034251.1 mouse_genomes_project 9 95678532 95686898 + MGP_WSBEiJ_P0092242 Paqr9 protein_coding protein_coding MGP_WSBEiJ_T0089943.1 MGP_WSBEiJ_G0033539.1 mouse_genomes_project 9 17347805 17374149 - MGP_WSBEiJ_P0089943 Zfp266 protein_coding protein_coding MGP_WSBEiJ_T0089944.1 MGP_WSBEiJ_G0033539.1 mouse_genomes_project 9 17351805 17374140 - MGP_WSBEiJ_P0089944 Zfp266 protein_coding protein_coding MGP_WSBEiJ_T0092665.1 MGP_WSBEiJ_G0034336.1 mouse_genomes_project 9 106794408 106815758 + MGP_WSBEiJ_P0092665 Wdr82 protein_coding protein_coding MGP_WSBEiJ_T0092666.1 MGP_WSBEiJ_G0034336.1 mouse_genomes_project 9 106794409 106797602 + Wdr82 protein_coding retained_intron MGP_WSBEiJ_T0092667.1 MGP_WSBEiJ_G0034336.1 mouse_genomes_project 9 106800265 106811144 + MGP_WSBEiJ_P0092667 Wdr82 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093298.1 MGP_WSBEiJ_G0034434.1 mouse_genomes_project 9 109720059 109721214 + MGP_WSBEiJ_P0093298 Ucn2 protein_coding protein_coding MGP_WSBEiJ_T0002357.1 MGP_WSBEiJ_G0002273.1 mouse_genomes_project 9 86727657 86729963 - TEC TEC MGP_WSBEiJ_T0090162.1 MGP_WSBEiJ_G0033621.1 mouse_genomes_project 9 23986048 24027025 - MGP_WSBEiJ_P0090162 Gm1110 protein_coding protein_coding MGP_WSBEiJ_T0098617.1 MGP_WSBEiJ_G0037280.1 mouse_genomes_project 9 71612499 71612603 - Gm25163 snRNA snRNA MGP_WSBEiJ_T0097123.1 MGP_WSBEiJ_G0035804.1 mouse_genomes_project 9 58810709 58810820 - Gm23668 rRNA rRNA MGP_WSBEiJ_T0093082.1 MGP_WSBEiJ_G0034403.1 mouse_genomes_project 9 108929209 108988543 - MGP_WSBEiJ_P0093082 Dag1 protein_coding protein_coding MGP_WSBEiJ_T0093083.1 MGP_WSBEiJ_G0034403.1 mouse_genomes_project 9 108930524 108988400 - MGP_WSBEiJ_P0093083 Dag1 protein_coding protein_coding MGP_WSBEiJ_T0093084.1 MGP_WSBEiJ_G0034403.1 mouse_genomes_project 9 108930535 108988503 - MGP_WSBEiJ_P0093084 Dag1 protein_coding protein_coding MGP_WSBEiJ_T0093085.1 MGP_WSBEiJ_G0034403.1 mouse_genomes_project 9 108930538 108988321 - MGP_WSBEiJ_P0093085 Dag1 protein_coding protein_coding MGP_WSBEiJ_T0093086.1 MGP_WSBEiJ_G0034403.1 mouse_genomes_project 9 108942755 108988336 - MGP_WSBEiJ_P0093086 Dag1 protein_coding protein_coding MGP_WSBEiJ_T0093087.1 MGP_WSBEiJ_G0034403.1 mouse_genomes_project 9 108942793 108988294 - MGP_WSBEiJ_P0093087 Dag1 protein_coding protein_coding MGP_WSBEiJ_T0093088.1 MGP_WSBEiJ_G0034403.1 mouse_genomes_project 9 108975978 108988336 - Dag1 protein_coding retained_intron MGP_WSBEiJ_T0091720.1 MGP_WSBEiJ_G0034130.1 mouse_genomes_project 9 71815711 71827518 + MGP_WSBEiJ_P0091720 Mns1 protein_coding protein_coding MGP_WSBEiJ_T0091721.1 MGP_WSBEiJ_G0034130.1 mouse_genomes_project 9 71816222 71831448 + MGP_WSBEiJ_P0091721 Mns1 protein_coding protein_coding MGP_WSBEiJ_T0091722.1 MGP_WSBEiJ_G0034130.1 mouse_genomes_project 9 71816231 71840761 + MGP_WSBEiJ_P0091722 Mns1 protein_coding protein_coding MGP_WSBEiJ_T0009180.1 MGP_WSBEiJ_G0007385.1 mouse_genomes_project 9 108278380 108281621 - Lsmem2 lincRNA lincRNA MGP_WSBEiJ_T0090304.1 MGP_WSBEiJ_G0033659.1 mouse_genomes_project 9 33010212 33015653 - MGP_WSBEiJ_P0090304 Pate4 protein_coding protein_coding MGP_WSBEiJ_T0091302.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60180664 60226945 + MGP_WSBEiJ_P0091302 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091303.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60180681 60226353 + MGP_WSBEiJ_P0091303 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091304.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181156 60226935 + MGP_WSBEiJ_P0091304 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091305.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181679 60217809 + MGP_WSBEiJ_P0091305 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091306.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181683 60226285 + MGP_WSBEiJ_P0091306 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091307.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181714 60215883 + MGP_WSBEiJ_P0091307 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091308.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181715 60226938 + MGP_WSBEiJ_P0091308 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091309.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181736 60225164 + MGP_WSBEiJ_P0091309 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091310.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181736 60225164 + MGP_WSBEiJ_P0091310 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091311.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181780 60210325 + MGP_WSBEiJ_P0091311 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091312.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181812 60225424 + MGP_WSBEiJ_P0091312 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091313.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60181970 60225424 + MGP_WSBEiJ_P0091313 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091314.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60182627 60203070 + MGP_WSBEiJ_P0091314 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091315.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60183821 60225424 + MGP_WSBEiJ_P0091315 Tle3 protein_coding protein_coding MGP_WSBEiJ_T0091316.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60210291 60218578 + Tle3 protein_coding processed_transcript MGP_WSBEiJ_T0091317.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60210893 60226283 + Tle3 protein_coding retained_intron MGP_WSBEiJ_T0091318.1 MGP_WSBEiJ_G0034031.1 mouse_genomes_project 9 60218380 60226867 + Tle3 protein_coding processed_transcript MGP_WSBEiJ_T0090816.1 MGP_WSBEiJ_G0033877.1 mouse_genomes_project 9 46723906 46735897 + MGP_WSBEiJ_P0090816 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0092757.1 MGP_WSBEiJ_G0034355.1 mouse_genomes_project 9 107282201 107283295 + MGP_WSBEiJ_P0092757 Iqcf6 protein_coding protein_coding MGP_WSBEiJ_T0015642.1 MGP_WSBEiJ_G0013772.1 mouse_genomes_project 9 118863970 118866069 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092291.1 MGP_WSBEiJ_G0034259.1 mouse_genomes_project 9 96505557 96539422 - MGP_WSBEiJ_P0092291 Atp1b3 protein_coding protein_coding MGP_WSBEiJ_T0092292.1 MGP_WSBEiJ_G0034259.1 mouse_genomes_project 9 96512350 96517255 - Atp1b3 protein_coding retained_intron MGP_WSBEiJ_T0092293.1 MGP_WSBEiJ_G0034259.1 mouse_genomes_project 9 96519635 96523217 - Atp1b3 protein_coding processed_transcript MGP_WSBEiJ_T0092087.1 MGP_WSBEiJ_G0034214.1 mouse_genomes_project 9 86505682 86634324 - MGP_WSBEiJ_P0092087 Me1 protein_coding protein_coding MGP_WSBEiJ_T0092088.1 MGP_WSBEiJ_G0034214.1 mouse_genomes_project 9 86505717 86625112 - MGP_WSBEiJ_P0092088 Me1 protein_coding protein_coding MGP_WSBEiJ_T0092089.1 MGP_WSBEiJ_G0034214.1 mouse_genomes_project 9 86507767 86551300 - Me1 protein_coding processed_transcript MGP_WSBEiJ_T0092090.1 MGP_WSBEiJ_G0034214.1 mouse_genomes_project 9 86546116 86551333 - Me1 protein_coding processed_transcript MGP_WSBEiJ_T0090709.1 MGP_WSBEiJ_G0033845.1 mouse_genomes_project 9 43187205 43199257 + MGP_WSBEiJ_P0090709 Mpzl2 protein_coding protein_coding MGP_WSBEiJ_T0091835.1 MGP_WSBEiJ_G0034154.1 mouse_genomes_project 9 74852361 74872290 - Mapk6 protein_coding processed_transcript MGP_WSBEiJ_T0091836.1 MGP_WSBEiJ_G0034154.1 mouse_genomes_project 9 74870172 74892600 - MGP_WSBEiJ_P0091836 Mapk6 protein_coding protein_coding MGP_WSBEiJ_T0091837.1 MGP_WSBEiJ_G0034154.1 mouse_genomes_project 9 74870174 74893246 - MGP_WSBEiJ_P0091837 Mapk6 protein_coding protein_coding MGP_WSBEiJ_T0091838.1 MGP_WSBEiJ_G0034154.1 mouse_genomes_project 9 74876358 74880877 - Mapk6 protein_coding retained_intron MGP_WSBEiJ_T0091839.1 MGP_WSBEiJ_G0034154.1 mouse_genomes_project 9 74877003 74893237 - Mapk6 protein_coding retained_intron MGP_WSBEiJ_T0091840.1 MGP_WSBEiJ_G0034154.1 mouse_genomes_project 9 74881528 74892824 - Mapk6 protein_coding processed_transcript MGP_WSBEiJ_T0091841.1 MGP_WSBEiJ_G0034154.1 mouse_genomes_project 9 74881681 74893226 - Mapk6 protein_coding processed_transcript MGP_WSBEiJ_T0092220.1 MGP_WSBEiJ_G0034245.1 mouse_genomes_project 9 92523842 92560688 + MGP_WSBEiJ_P0092220 Plscr4 protein_coding protein_coding MGP_WSBEiJ_T0092221.1 MGP_WSBEiJ_G0034245.1 mouse_genomes_project 9 92523863 92553526 + Plscr4 protein_coding retained_intron MGP_WSBEiJ_T0091436.1 MGP_WSBEiJ_G0034063.1 mouse_genomes_project 9 63956845 63984148 + MGP_WSBEiJ_P0091436 Vwa9 protein_coding protein_coding MGP_WSBEiJ_T0091437.1 MGP_WSBEiJ_G0034063.1 mouse_genomes_project 9 63956950 63984148 + MGP_WSBEiJ_P0091437 Vwa9 protein_coding protein_coding MGP_WSBEiJ_T0089974.1 MGP_WSBEiJ_G0033546.1 mouse_genomes_project 9 17690176 17699053 + MGP_WSBEiJ_P0089974 Rdh8 protein_coding protein_coding MGP_WSBEiJ_T0002330.1 MGP_WSBEiJ_G0002247.1 mouse_genomes_project 9 71818466 71821704 + TEC TEC MGP_WSBEiJ_T0090971.1 MGP_WSBEiJ_G0033930.1 mouse_genomes_project 9 52058329 52089619 - MGP_WSBEiJ_P0090971 Acat1 protein_coding protein_coding MGP_WSBEiJ_T0090972.1 MGP_WSBEiJ_G0033930.1 mouse_genomes_project 9 52060294 52061564 - Acat1 protein_coding processed_transcript MGP_WSBEiJ_T0090973.1 MGP_WSBEiJ_G0033930.1 mouse_genomes_project 9 52075366 52089567 - Acat1 protein_coding retained_intron MGP_WSBEiJ_T0002367.1 MGP_WSBEiJ_G0002283.1 mouse_genomes_project 9 91358160 91359986 - TEC TEC MGP_WSBEiJ_T0090068.1 MGP_WSBEiJ_G0033580.1 mouse_genomes_project 9 18701646 18706338 - MGP_WSBEiJ_P0090068 Spc24 protein_coding protein_coding MGP_WSBEiJ_T0091237.1 MGP_WSBEiJ_G0034013.1 mouse_genomes_project 9 57561381 57724800 - MGP_WSBEiJ_P0091237 Neo1 protein_coding protein_coding MGP_WSBEiJ_T0091238.1 MGP_WSBEiJ_G0034013.1 mouse_genomes_project 9 57561423 57724487 - MGP_WSBEiJ_P0091238 Neo1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0002371.1 MGP_WSBEiJ_G0002287.1 mouse_genomes_project 9 92610348 92614417 - TEC TEC MGP_WSBEiJ_T0015596.1 MGP_WSBEiJ_G0013726.1 mouse_genomes_project 9 92684883 92685330 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092227.1 MGP_WSBEiJ_G0034247.1 mouse_genomes_project 9 94605972 94626170 - MGP_WSBEiJ_P0092227 1190002N15Rik protein_coding protein_coding MGP_WSBEiJ_T0015591.1 MGP_WSBEiJ_G0013721.1 mouse_genomes_project 9 90744134 90744297 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0015576.1 MGP_WSBEiJ_G0013706.1 mouse_genomes_project 9 83807924 83808915 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090573.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42142176 42170752 + MGP_WSBEiJ_P0090573 Usp2 protein_coding protein_coding MGP_WSBEiJ_T0090574.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42142233 42169061 + MGP_WSBEiJ_P0090574 Usp2 protein_coding protein_coding MGP_WSBEiJ_T0090575.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42144598 42169134 + MGP_WSBEiJ_P0090575 Usp2 protein_coding protein_coding MGP_WSBEiJ_T0090576.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42147343 42151074 + MGP_WSBEiJ_P0090576 Usp2 protein_coding protein_coding MGP_WSBEiJ_T0090577.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42160081 42169058 + MGP_WSBEiJ_P0090577 Usp2 protein_coding protein_coding MGP_WSBEiJ_T0090578.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42160082 42169618 + MGP_WSBEiJ_P0090578 Usp2 protein_coding protein_coding MGP_WSBEiJ_T0090579.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42162318 42167628 + MGP_WSBEiJ_P0090579 Usp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090580.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42167595 42169505 + Usp2 protein_coding processed_transcript MGP_WSBEiJ_T0090581.1 MGP_WSBEiJ_G0033807.1 mouse_genomes_project 9 42167801 42169065 + Usp2 protein_coding processed_transcript MGP_WSBEiJ_T0015546.1 MGP_WSBEiJ_G0013676.1 mouse_genomes_project 9 71650196 71650641 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010909.1 MGP_WSBEiJ_G0009066.1 mouse_genomes_project 9 109314174 109314248 + Mir191 miRNA miRNA MGP_WSBEiJ_T0009149.1 MGP_WSBEiJ_G0007361.1 mouse_genomes_project 9 92776965 92804224 + lincRNA lincRNA MGP_WSBEiJ_T0009150.1 MGP_WSBEiJ_G0007361.1 mouse_genomes_project 9 92778225 92857769 + lincRNA lincRNA MGP_WSBEiJ_T0090092.1 MGP_WSBEiJ_G0033593.1 mouse_genomes_project 9 18992480 19029544 - MGP_WSBEiJ_P0090092 Elavl3 protein_coding protein_coding MGP_WSBEiJ_T0090093.1 MGP_WSBEiJ_G0033593.1 mouse_genomes_project 9 19000391 19013264 - MGP_WSBEiJ_P0090093 Elavl3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0010856.1 MGP_WSBEiJ_G0009013.1 mouse_genomes_project 9 14932733 14932844 - Gm44498 miRNA miRNA MGP_WSBEiJ_T0093879.1 MGP_WSBEiJ_G0034571.1 mouse_genomes_project 9 124545054 124577374 + MGP_WSBEiJ_P0093879 Tcaim protein_coding protein_coding MGP_WSBEiJ_T0093880.1 MGP_WSBEiJ_G0034571.1 mouse_genomes_project 9 124545076 124551370 + Tcaim protein_coding processed_transcript MGP_WSBEiJ_T0093881.1 MGP_WSBEiJ_G0034571.1 mouse_genomes_project 9 124545111 124577367 + MGP_WSBEiJ_P0093881 Tcaim protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002314.1 MGP_WSBEiJ_G0002231.1 mouse_genomes_project 9 33238911 33239988 + TEC TEC MGP_WSBEiJ_T0089845.1 MGP_WSBEiJ_G0033490.1 mouse_genomes_project 9 12114539 12121160 + MGP_WSBEiJ_P0089845 Taf1d protein_coding protein_coding MGP_WSBEiJ_T0089846.1 MGP_WSBEiJ_G0033490.1 mouse_genomes_project 9 12114539 12121160 + MGP_WSBEiJ_P0089846 Taf1d protein_coding protein_coding MGP_WSBEiJ_T0002374.1 MGP_WSBEiJ_G0002290.1 mouse_genomes_project 9 96386422 96389401 + TEC TEC MGP_WSBEiJ_T0091955.1 MGP_WSBEiJ_G0034193.1 mouse_genomes_project 9 79573848 79742488 - MGP_WSBEiJ_P0091955 Filip1 protein_coding protein_coding MGP_WSBEiJ_T0091956.1 MGP_WSBEiJ_G0034193.1 mouse_genomes_project 9 79573854 79593224 - Filip1 protein_coding processed_transcript MGP_WSBEiJ_T0091957.1 MGP_WSBEiJ_G0034193.1 mouse_genomes_project 9 79579458 79726689 - MGP_WSBEiJ_P0091957 Filip1 protein_coding protein_coding MGP_WSBEiJ_T0010879.1 MGP_WSBEiJ_G0009036.1 mouse_genomes_project 9 49509542 49509626 - Mir34b miRNA miRNA MGP_WSBEiJ_T0091958.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79836197 79865611 + Senp6 protein_coding retained_intron MGP_WSBEiJ_T0091959.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79836197 79918540 + MGP_WSBEiJ_P0091959 Senp6 protein_coding protein_coding MGP_WSBEiJ_T0091960.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79836230 79885024 + MGP_WSBEiJ_P0091960 Senp6 protein_coding protein_coding MGP_WSBEiJ_T0091961.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79836393 79918368 + MGP_WSBEiJ_P0091961 Senp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091962.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79836818 79922823 + MGP_WSBEiJ_P0091962 Senp6 protein_coding protein_coding MGP_WSBEiJ_T0091963.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79837111 79858562 + Senp6 protein_coding processed_transcript MGP_WSBEiJ_T0091964.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79863414 79893278 + MGP_WSBEiJ_P0091964 Senp6 protein_coding protein_coding MGP_WSBEiJ_T0091965.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79874442 79917299 + MGP_WSBEiJ_P0091965 Senp6 protein_coding protein_coding MGP_WSBEiJ_T0091966.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79885292 79890017 + MGP_WSBEiJ_P0091966 Senp6 protein_coding protein_coding MGP_WSBEiJ_T0091967.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79885309 79893350 + Senp6 protein_coding processed_transcript MGP_WSBEiJ_T0091968.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79895094 79909204 + MGP_WSBEiJ_P0091968 Senp6 protein_coding protein_coding MGP_WSBEiJ_T0091969.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79909004 79917758 + Senp6 protein_coding retained_intron MGP_WSBEiJ_T0091970.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79911664 79917296 + Senp6 protein_coding retained_intron MGP_WSBEiJ_T0091971.1 MGP_WSBEiJ_G0034194.1 mouse_genomes_project 9 79914642 79917592 + Senp6 protein_coding retained_intron MGP_WSBEiJ_T0090006.1 MGP_WSBEiJ_G0033563.1 mouse_genomes_project 9 18125281 18135051 - MGP_WSBEiJ_P0090006 Keap1 protein_coding protein_coding MGP_WSBEiJ_T0090007.1 MGP_WSBEiJ_G0033563.1 mouse_genomes_project 9 18125282 18134790 - MGP_WSBEiJ_P0090007 Keap1 protein_coding protein_coding MGP_WSBEiJ_T0090008.1 MGP_WSBEiJ_G0033563.1 mouse_genomes_project 9 18125618 18134532 - MGP_WSBEiJ_P0090008 Keap1 protein_coding protein_coding MGP_WSBEiJ_T0090009.1 MGP_WSBEiJ_G0033563.1 mouse_genomes_project 9 18126184 18134798 - MGP_WSBEiJ_P0090009 Keap1 protein_coding protein_coding MGP_WSBEiJ_T0090010.1 MGP_WSBEiJ_G0033563.1 mouse_genomes_project 9 18131698 18132913 - Keap1 protein_coding processed_transcript MGP_WSBEiJ_T0090889.1 MGP_WSBEiJ_G0033905.1 mouse_genomes_project 9 49122711 49129528 - MGP_WSBEiJ_P0090889 2310030G06Rik protein_coding protein_coding MGP_WSBEiJ_T0010892.1 MGP_WSBEiJ_G0009049.1 mouse_genomes_project 9 66878840 66878919 - Mir7242 miRNA miRNA MGP_WSBEiJ_T0089987.1 MGP_WSBEiJ_G0033550.1 mouse_genomes_project 9 17768340 17772602 - MGP_WSBEiJ_P0089987 Eif3g protein_coding protein_coding MGP_WSBEiJ_T0090210.1 MGP_WSBEiJ_G0033637.1 mouse_genomes_project 9 28560227 28616641 + MGP_WSBEiJ_P0090210 Prdm10 protein_coding protein_coding MGP_WSBEiJ_T0090211.1 MGP_WSBEiJ_G0033637.1 mouse_genomes_project 9 28598223 28616630 + Prdm10 protein_coding retained_intron MGP_WSBEiJ_T0090212.1 MGP_WSBEiJ_G0033637.1 mouse_genomes_project 9 28598526 28674023 + MGP_WSBEiJ_P0090212 Prdm10 protein_coding protein_coding MGP_WSBEiJ_T0090213.1 MGP_WSBEiJ_G0033637.1 mouse_genomes_project 9 28622584 28677216 + MGP_WSBEiJ_P0090213 Prdm10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092326.1 MGP_WSBEiJ_G0034264.1 mouse_genomes_project 9 97151102 97227873 - MGP_WSBEiJ_P0092326 Spsb4 protein_coding protein_coding MGP_WSBEiJ_T0092327.1 MGP_WSBEiJ_G0034264.1 mouse_genomes_project 9 97151105 97191760 - Spsb4 protein_coding processed_transcript MGP_WSBEiJ_T0092328.1 MGP_WSBEiJ_G0034264.1 mouse_genomes_project 9 97151592 97179531 - Spsb4 protein_coding processed_transcript MGP_WSBEiJ_T0092329.1 MGP_WSBEiJ_G0034264.1 mouse_genomes_project 9 97201628 97227794 - Spsb4 protein_coding retained_intron MGP_WSBEiJ_T0090418.1 MGP_WSBEiJ_G0033709.1 mouse_genomes_project 9 35857011 35857953 + MGP_WSBEiJ_P0090418 Olfr143 protein_coding protein_coding MGP_WSBEiJ_T0090096.1 MGP_WSBEiJ_G0033595.1 mouse_genomes_project 9 19049362 19064037 - MGP_WSBEiJ_P0090096 Ecsit protein_coding protein_coding MGP_WSBEiJ_T0090097.1 MGP_WSBEiJ_G0033595.1 mouse_genomes_project 9 19049362 19064048 - MGP_WSBEiJ_P0090097 Ecsit protein_coding protein_coding MGP_WSBEiJ_T0090098.1 MGP_WSBEiJ_G0033595.1 mouse_genomes_project 9 19049362 19064012 - MGP_WSBEiJ_P0090098 Ecsit protein_coding protein_coding MGP_WSBEiJ_T0090099.1 MGP_WSBEiJ_G0033595.1 mouse_genomes_project 9 19050620 19064037 - MGP_WSBEiJ_P0090099 Ecsit protein_coding protein_coding MGP_WSBEiJ_T0092469.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103017413 103019422 - Cep63 protein_coding TEC MGP_WSBEiJ_T0092470.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103019393 103059353 - MGP_WSBEiJ_P0092470 Cep63 protein_coding protein_coding MGP_WSBEiJ_T0092471.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103019406 103059763 - MGP_WSBEiJ_P0092471 Cep63 protein_coding protein_coding MGP_WSBEiJ_T0092472.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103019502 103019986 - Cep63 protein_coding retained_intron MGP_WSBEiJ_T0092473.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103023775 103055192 - Cep63 protein_coding retained_intron MGP_WSBEiJ_T0092474.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103031618 103036151 - Cep63 protein_coding retained_intron MGP_WSBEiJ_T0092475.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103048545 103059252 - MGP_WSBEiJ_P0092475 Cep63 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092476.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103052045 103059738 - MGP_WSBEiJ_P0092476 Cep63 protein_coding protein_coding MGP_WSBEiJ_T0092477.1 MGP_WSBEiJ_G0034302.1 mouse_genomes_project 9 103052095 103059738 - MGP_WSBEiJ_P0092477 Cep63 protein_coding protein_coding MGP_WSBEiJ_T0097129.1 MGP_WSBEiJ_G0035810.1 mouse_genomes_project 9 96678701 96678783 - Gm27289 rRNA rRNA MGP_WSBEiJ_T0093632.1 MGP_WSBEiJ_G0034490.1 mouse_genomes_project 9 114961817 115072974 + MGP_WSBEiJ_P0093632 Clasp2 protein_coding protein_coding MGP_WSBEiJ_T0093633.1 MGP_WSBEiJ_G0034490.1 mouse_genomes_project 9 114961817 115072974 + MGP_WSBEiJ_P0093633 Clasp2 protein_coding protein_coding MGP_WSBEiJ_T0093634.1 MGP_WSBEiJ_G0034490.1 mouse_genomes_project 9 114961831 115071417 + MGP_WSBEiJ_P0093634 Clasp2 protein_coding protein_coding MGP_WSBEiJ_T0090180.1 MGP_WSBEiJ_G0033629.1 mouse_genomes_project 9 24957591 24958342 + Opcml protein_coding processed_transcript MGP_WSBEiJ_T0090181.1 MGP_WSBEiJ_G0033629.1 mouse_genomes_project 9 24957763 26134522 + MGP_WSBEiJ_P0090181 Opcml protein_coding protein_coding MGP_WSBEiJ_T0090182.1 MGP_WSBEiJ_G0033629.1 mouse_genomes_project 9 24958118 25205520 + Opcml protein_coding processed_transcript MGP_WSBEiJ_T0090183.1 MGP_WSBEiJ_G0033629.1 mouse_genomes_project 9 25588323 25591127 + Opcml protein_coding processed_transcript MGP_WSBEiJ_T0090184.1 MGP_WSBEiJ_G0033629.1 mouse_genomes_project 9 25588971 26130195 + MGP_WSBEiJ_P0090184 Opcml protein_coding protein_coding MGP_WSBEiJ_T0090185.1 MGP_WSBEiJ_G0033629.1 mouse_genomes_project 9 25589258 26015441 + Opcml protein_coding retained_intron MGP_WSBEiJ_T0090186.1 MGP_WSBEiJ_G0033629.1 mouse_genomes_project 9 25589344 25844152 + Opcml protein_coding processed_transcript MGP_WSBEiJ_T0091680.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71194973 71463804 - MGP_WSBEiJ_P0091680 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091681.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71196527 71250253 - Tcf12 protein_coding retained_intron MGP_WSBEiJ_T0091682.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71196543 71463778 - MGP_WSBEiJ_P0091682 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091683.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71196548 71250567 - MGP_WSBEiJ_P0091683 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091684.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71196552 71463763 - MGP_WSBEiJ_P0091684 Tcf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091685.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71196998 71463607 - MGP_WSBEiJ_P0091685 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091686.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71197787 71463828 - MGP_WSBEiJ_P0091686 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091687.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71202172 71250256 - MGP_WSBEiJ_P0091687 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091688.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71202175 71463769 - MGP_WSBEiJ_P0091688 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091689.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71210873 71463158 - MGP_WSBEiJ_P0091689 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091690.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71221900 71239183 - Tcf12 protein_coding processed_transcript MGP_WSBEiJ_T0091691.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71229667 71250152 - MGP_WSBEiJ_P0091691 Tcf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091692.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71229667 71461726 - MGP_WSBEiJ_P0091692 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091693.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71237203 71348699 - MGP_WSBEiJ_P0091693 Tcf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091694.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71237593 71348697 - MGP_WSBEiJ_P0091694 Tcf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091695.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71238214 71463728 - MGP_WSBEiJ_P0091695 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091696.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71238235 71463556 - MGP_WSBEiJ_P0091696 Tcf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091697.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71238908 71277556 - MGP_WSBEiJ_P0091697 Tcf12 protein_coding protein_coding MGP_WSBEiJ_T0091698.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71239686 71463748 - MGP_WSBEiJ_P0091698 Tcf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091699.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71297085 71463804 - Tcf12 protein_coding retained_intron MGP_WSBEiJ_T0091700.1 MGP_WSBEiJ_G0034128.1 mouse_genomes_project 9 71458169 71462483 - Tcf12 protein_coding retained_intron MGP_WSBEiJ_T0015543.1 MGP_WSBEiJ_G0013673.1 mouse_genomes_project 9 71263120 71263829 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002386.1 MGP_WSBEiJ_G0002302.1 mouse_genomes_project 9 101491746 101493341 + TEC TEC MGP_WSBEiJ_T0090715.1 MGP_WSBEiJ_G0033847.1 mouse_genomes_project 9 43224411 43254561 + MGP_WSBEiJ_P0090715 Amica1 protein_coding protein_coding MGP_WSBEiJ_T0005477.1 MGP_WSBEiJ_G0004619.1 mouse_genomes_project 9 120408579 120446549 - Gm2415 antisense antisense MGP_WSBEiJ_T0005478.1 MGP_WSBEiJ_G0004619.1 mouse_genomes_project 9 120408662 120446559 - Gm2415 antisense antisense MGP_WSBEiJ_T0005479.1 MGP_WSBEiJ_G0004619.1 mouse_genomes_project 9 120421893 120446548 - Gm2415 antisense antisense MGP_WSBEiJ_T0005480.1 MGP_WSBEiJ_G0004619.1 mouse_genomes_project 9 120444755 120446745 - Gm2415 antisense antisense MGP_WSBEiJ_T0002322.1 MGP_WSBEiJ_G0002239.1 mouse_genomes_project 9 71336752 71339047 - TEC TEC MGP_WSBEiJ_T0009198.1 MGP_WSBEiJ_G0007397.1 mouse_genomes_project 9 119628163 119648078 + Gm17399 lincRNA lincRNA MGP_WSBEiJ_T0002339.1 MGP_WSBEiJ_G0002256.1 mouse_genomes_project 9 72451048 72452892 + TEC TEC MGP_WSBEiJ_T0011549.1 MGP_WSBEiJ_G0009706.1 mouse_genomes_project 9 114510483 114510780 + Gm22492 misc_RNA misc_RNA MGP_WSBEiJ_T0005392.1 MGP_WSBEiJ_G0004557.1 mouse_genomes_project 9 71735394 71788679 - BC065403 antisense antisense MGP_WSBEiJ_T0005393.1 MGP_WSBEiJ_G0004557.1 mouse_genomes_project 9 71787378 71788601 - BC065403 antisense antisense MGP_WSBEiJ_T0010872.1 MGP_WSBEiJ_G0009029.1 mouse_genomes_project 9 40871671 40871750 - Gm27509 miRNA miRNA MGP_WSBEiJ_T0097130.1 MGP_WSBEiJ_G0035811.1 mouse_genomes_project 9 96739332 96739448 - n-R5s87 rRNA rRNA MGP_WSBEiJ_T0091804.1 MGP_WSBEiJ_G0034148.1 mouse_genomes_project 9 74410810 74496866 + MGP_WSBEiJ_P0091804 Fam214a protein_coding protein_coding MGP_WSBEiJ_T0091805.1 MGP_WSBEiJ_G0034148.1 mouse_genomes_project 9 74434489 74496866 + MGP_WSBEiJ_P0091805 Fam214a protein_coding protein_coding MGP_WSBEiJ_T0093754.1 MGP_WSBEiJ_G0034530.1 mouse_genomes_project 9 121049142 121129846 - MGP_WSBEiJ_P0093754 Scn5a protein_coding protein_coding MGP_WSBEiJ_T0093755.1 MGP_WSBEiJ_G0034530.1 mouse_genomes_project 9 121049144 121146219 - MGP_WSBEiJ_P0093755 Scn5a protein_coding protein_coding MGP_WSBEiJ_T0093756.1 MGP_WSBEiJ_G0034530.1 mouse_genomes_project 9 121050050 121146219 - MGP_WSBEiJ_P0093756 Scn5a protein_coding protein_coding MGP_WSBEiJ_T0093757.1 MGP_WSBEiJ_G0034530.1 mouse_genomes_project 9 121129704 121130671 - MGP_WSBEiJ_P0093757 Scn5a protein_coding protein_coding MGP_WSBEiJ_T0092147.1 MGP_WSBEiJ_G0034228.1 mouse_genomes_project 9 88684211 88684655 - MGP_WSBEiJ_P0092147 Bcl2a1c protein_coding protein_coding MGP_WSBEiJ_T0009188.1 MGP_WSBEiJ_G0007390.1 mouse_genomes_project 9 111241985 111246658 - Gm42775 lincRNA lincRNA MGP_WSBEiJ_T0002430.1 MGP_WSBEiJ_G0002346.1 mouse_genomes_project 9 121789346 121789980 + TEC TEC MGP_WSBEiJ_T0002328.1 MGP_WSBEiJ_G0002245.1 mouse_genomes_project 9 71725123 71726109 + TEC TEC MGP_WSBEiJ_T0092538.1 MGP_WSBEiJ_G0034314.1 mouse_genomes_project 9 103826660 103839664 - MGP_WSBEiJ_P0092538 Cdv3 protein_coding protein_coding MGP_WSBEiJ_T0092539.1 MGP_WSBEiJ_G0034314.1 mouse_genomes_project 9 103835482 103838858 - Cdv3 protein_coding retained_intron MGP_WSBEiJ_T0092717.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107095848 107103643 + MGP_WSBEiJ_P0092717 Pcbp4 protein_coding protein_coding MGP_WSBEiJ_T0092718.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107095964 107102627 + Pcbp4 protein_coding processed_transcript MGP_WSBEiJ_T0092719.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107096393 107097388 + Pcbp4 protein_coding processed_transcript MGP_WSBEiJ_T0092720.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107096438 107106379 + MGP_WSBEiJ_P0092720 Pcbp4 protein_coding protein_coding MGP_WSBEiJ_T0092721.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107096468 107103069 + Pcbp4 protein_coding retained_intron MGP_WSBEiJ_T0092722.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107096481 107104322 + MGP_WSBEiJ_P0092722 Pcbp4 protein_coding protein_coding MGP_WSBEiJ_T0092723.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107098234 107098990 + Pcbp4 protein_coding processed_transcript MGP_WSBEiJ_T0092724.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107098647 107103627 + MGP_WSBEiJ_P0092724 Pcbp4 protein_coding protein_coding MGP_WSBEiJ_T0092725.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107102946 107103417 + Pcbp4 protein_coding retained_intron MGP_WSBEiJ_T0092726.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107103208 107103885 + MGP_WSBEiJ_P0092726 Pcbp4 protein_coding protein_coding MGP_WSBEiJ_T0092727.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107103604 107105916 + MGP_WSBEiJ_P0092727 Pcbp4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092728.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107103820 107104559 + Pcbp4 protein_coding retained_intron MGP_WSBEiJ_T0092729.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107103845 107105338 + MGP_WSBEiJ_P0092729 Pcbp4 protein_coding protein_coding MGP_WSBEiJ_T0092730.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107104140 107104809 + Pcbp4 protein_coding processed_transcript MGP_WSBEiJ_T0092731.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107104267 107106062 + MGP_WSBEiJ_P0092731 Pcbp4 protein_coding protein_coding MGP_WSBEiJ_T0092732.1 MGP_WSBEiJ_G0034347.1 mouse_genomes_project 9 107104450 107105069 + Pcbp4 protein_coding retained_intron MGP_WSBEiJ_T0010895.1 MGP_WSBEiJ_G0009052.1 mouse_genomes_project 9 72431944 72432066 + Gm27353 miRNA miRNA MGP_WSBEiJ_T0092348.1 MGP_WSBEiJ_G0034270.1 mouse_genomes_project 9 98736078 98760585 + MGP_WSBEiJ_P0092348 Rbp2 protein_coding protein_coding MGP_WSBEiJ_T0092349.1 MGP_WSBEiJ_G0034270.1 mouse_genomes_project 9 98736129 98760455 + MGP_WSBEiJ_P0092349 Rbp2 protein_coding protein_coding MGP_WSBEiJ_T0092350.1 MGP_WSBEiJ_G0034270.1 mouse_genomes_project 9 98740493 98760575 + MGP_WSBEiJ_P0092350 Rbp2 protein_coding protein_coding MGP_WSBEiJ_T0092351.1 MGP_WSBEiJ_G0034270.1 mouse_genomes_project 9 98741653 98748874 + Rbp2 protein_coding processed_transcript MGP_WSBEiJ_T0005411.1 MGP_WSBEiJ_G0004570.1 mouse_genomes_project 9 86633830 86639603 + A330041J22Rik antisense antisense MGP_WSBEiJ_T0090496.1 MGP_WSBEiJ_G0033775.1 mouse_genomes_project 9 37844991 37845985 + MGP_WSBEiJ_P0090496 Olfr981 protein_coding protein_coding MGP_WSBEiJ_T0089722.1 MGP_WSBEiJ_G0033451.1 mouse_genomes_project 9 4416726 4429122 + MGP_WSBEiJ_P0089722 Mmp27 protein_coding protein_coding MGP_WSBEiJ_T0089723.1 MGP_WSBEiJ_G0033451.1 mouse_genomes_project 9 4416788 4429117 + MGP_WSBEiJ_P0089723 Mmp27 protein_coding protein_coding MGP_WSBEiJ_T0089724.1 MGP_WSBEiJ_G0033451.1 mouse_genomes_project 9 4416793 4429592 + MGP_WSBEiJ_P0089724 Mmp27 protein_coding protein_coding MGP_WSBEiJ_T0092154.1 MGP_WSBEiJ_G0034233.1 mouse_genomes_project 9 89675176 89689414 - MGP_WSBEiJ_P0092154 Ankrd34c protein_coding protein_coding MGP_WSBEiJ_T0092155.1 MGP_WSBEiJ_G0034233.1 mouse_genomes_project 9 89678414 89689384 - MGP_WSBEiJ_P0092155 Ankrd34c protein_coding protein_coding MGP_WSBEiJ_T0091094.1 MGP_WSBEiJ_G0033973.1 mouse_genomes_project 9 55505961 55542493 + MGP_WSBEiJ_P0091094 Snupn protein_coding protein_coding MGP_WSBEiJ_T0090313.1 MGP_WSBEiJ_G0033665.1 mouse_genomes_project 9 33193604 33195671 - MGP_WSBEiJ_P0090313 D730048I06Rik protein_coding protein_coding MGP_WSBEiJ_T0005339.1 MGP_WSBEiJ_G0004521.1 mouse_genomes_project 9 17980752 18017801 + 1700084C06Rik antisense antisense MGP_WSBEiJ_T0091132.1 MGP_WSBEiJ_G0033979.1 mouse_genomes_project 9 55820583 55834896 + MGP_WSBEiJ_P0091132 Trcg1 protein_coding protein_coding MGP_WSBEiJ_T0009137.1 MGP_WSBEiJ_G0007351.1 mouse_genomes_project 9 83527444 83529185 + Gm2109 lincRNA lincRNA MGP_WSBEiJ_T0093309.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109773501 109791183 + MGP_WSBEiJ_P0093309 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093310.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109773521 109791130 + MGP_WSBEiJ_P0093310 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093311.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109773538 109791130 + Shisa5 protein_coding retained_intron MGP_WSBEiJ_T0093312.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109775355 109790149 + MGP_WSBEiJ_P0093312 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093313.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109775546 109784801 + MGP_WSBEiJ_P0093313 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093314.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784506 109790361 + MGP_WSBEiJ_P0093314 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093315.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784565 109789784 + MGP_WSBEiJ_P0093315 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093316.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784569 109790430 + MGP_WSBEiJ_P0093316 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093317.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784590 109789758 + MGP_WSBEiJ_P0093317 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093318.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784608 109790419 + MGP_WSBEiJ_P0093318 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093319.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784610 109789817 + MGP_WSBEiJ_P0093319 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093320.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784612 109790137 + MGP_WSBEiJ_P0093320 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093321.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784621 109789780 + MGP_WSBEiJ_P0093321 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093322.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109784845 109790264 + MGP_WSBEiJ_P0093322 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093323.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109786263 109790108 + Shisa5 protein_coding processed_transcript MGP_WSBEiJ_T0093324.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109788272 109790613 + MGP_WSBEiJ_P0093324 Shisa5 protein_coding protein_coding MGP_WSBEiJ_T0093325.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109788357 109789957 + Shisa5 protein_coding processed_transcript MGP_WSBEiJ_T0093326.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109788421 109789897 + Shisa5 protein_coding processed_transcript MGP_WSBEiJ_T0093327.1 MGP_WSBEiJ_G0034436.1 mouse_genomes_project 9 109789345 109789881 + Shisa5 protein_coding retained_intron MGP_WSBEiJ_T0090427.1 MGP_WSBEiJ_G0033718.1 mouse_genomes_project 9 36091035 36091968 + MGP_WSBEiJ_P0090427 Olfr904 protein_coding protein_coding MGP_WSBEiJ_T0091258.1 MGP_WSBEiJ_G0034021.1 mouse_genomes_project 9 58398340 58426950 + MGP_WSBEiJ_P0091258 Pkm protein_coding unknown_likely_coding MGP_WSBEiJ_T0010894.1 MGP_WSBEiJ_G0009051.1 mouse_genomes_project 9 70109715 70109797 - Gm25149 miRNA miRNA MGP_WSBEiJ_T0090243.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 31868059 31871210 + MGP_WSBEiJ_P0090243 Kirrel3 protein_coding protein_coding MGP_WSBEiJ_T0090244.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 31868290 31892629 + Kirrel3 protein_coding processed_transcript MGP_WSBEiJ_T0090245.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 31868291 32443643 + MGP_WSBEiJ_P0090245 Kirrel3 protein_coding protein_coding MGP_WSBEiJ_T0090246.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 31870784 32445079 + MGP_WSBEiJ_P0090246 Kirrel3 protein_coding protein_coding MGP_WSBEiJ_T0090247.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 31870846 32445079 + MGP_WSBEiJ_P0090247 Kirrel3 protein_coding protein_coding MGP_WSBEiJ_T0090248.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 31870846 32439268 + MGP_WSBEiJ_P0090248 Kirrel3 protein_coding protein_coding MGP_WSBEiJ_T0090249.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 31870879 32444673 + MGP_WSBEiJ_P0090249 Kirrel3 protein_coding protein_coding MGP_WSBEiJ_T0090250.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 31870987 32444673 + MGP_WSBEiJ_P0090250 Kirrel3 protein_coding protein_coding MGP_WSBEiJ_T0090251.1 MGP_WSBEiJ_G0033646.1 mouse_genomes_project 9 32424836 32439266 + MGP_WSBEiJ_P0090251 Kirrel3 protein_coding protein_coding MGP_WSBEiJ_T0005439.1 MGP_WSBEiJ_G0004588.1 mouse_genomes_project 9 105773230 105776003 + Gm20643 antisense antisense MGP_WSBEiJ_T0089885.1 MGP_WSBEiJ_G0033502.1 mouse_genomes_project 9 15271752 15274609 + MGP_WSBEiJ_P0089885 Mbd3l2 protein_coding protein_coding MGP_WSBEiJ_T0091251.1 MGP_WSBEiJ_G0034019.1 mouse_genomes_project 9 58309413 58344755 + MGP_WSBEiJ_P0091251 Celf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091252.1 MGP_WSBEiJ_G0034019.1 mouse_genomes_project 9 58309688 58344755 + MGP_WSBEiJ_P0091252 Celf6 protein_coding protein_coding MGP_WSBEiJ_T0091253.1 MGP_WSBEiJ_G0034019.1 mouse_genomes_project 9 58309688 58344755 + MGP_WSBEiJ_P0091253 Celf6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091254.1 MGP_WSBEiJ_G0034019.1 mouse_genomes_project 9 58309874 58346883 + MGP_WSBEiJ_P0091254 Celf6 protein_coding protein_coding MGP_WSBEiJ_T0091255.1 MGP_WSBEiJ_G0034019.1 mouse_genomes_project 9 58338778 58339532 + Celf6 protein_coding retained_intron MGP_WSBEiJ_T0091256.1 MGP_WSBEiJ_G0034019.1 mouse_genomes_project 9 58340153 58343565 + Celf6 protein_coding retained_intron MGP_WSBEiJ_T0089886.1 MGP_WSBEiJ_G0033503.1 mouse_genomes_project 9 15283848 15308234 - MGP_WSBEiJ_P0089886 Zfp558 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089887.1 MGP_WSBEiJ_G0033503.1 mouse_genomes_project 9 15284465 15303530 - MGP_WSBEiJ_P0089887 Zfp558 protein_coding protein_coding MGP_WSBEiJ_T0089888.1 MGP_WSBEiJ_G0033503.1 mouse_genomes_project 9 15287930 15308239 - Zfp558 protein_coding processed_transcript MGP_WSBEiJ_T0089889.1 MGP_WSBEiJ_G0033503.1 mouse_genomes_project 9 15302860 15303393 - Zfp558 protein_coding processed_transcript MGP_WSBEiJ_T0089701.1 MGP_WSBEiJ_G0033443.1 mouse_genomes_project 9 3744674 4004540 - MGP_WSBEiJ_P0089701 Dync2h1 protein_coding protein_coding MGP_WSBEiJ_T0089702.1 MGP_WSBEiJ_G0033443.1 mouse_genomes_project 9 3744674 3997158 - MGP_WSBEiJ_P0089702 Dync2h1 protein_coding protein_coding MGP_WSBEiJ_T0089703.1 MGP_WSBEiJ_G0033443.1 mouse_genomes_project 9 3745475 3997069 - MGP_WSBEiJ_P0089703 Dync2h1 protein_coding protein_coding MGP_WSBEiJ_T0089704.1 MGP_WSBEiJ_G0033443.1 mouse_genomes_project 9 3745636 3997069 - MGP_WSBEiJ_P0089704 Dync2h1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089705.1 MGP_WSBEiJ_G0033443.1 mouse_genomes_project 9 3758073 3773703 - Dync2h1 protein_coding retained_intron MGP_WSBEiJ_T0089706.1 MGP_WSBEiJ_G0033443.1 mouse_genomes_project 9 3843358 3927179 - MGP_WSBEiJ_P0089706 Dync2h1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089707.1 MGP_WSBEiJ_G0033443.1 mouse_genomes_project 9 3961363 3997156 - Dync2h1 protein_coding retained_intron MGP_WSBEiJ_T0089708.1 MGP_WSBEiJ_G0033443.1 mouse_genomes_project 9 3969419 3997077 - MGP_WSBEiJ_P0089708 Dync2h1 protein_coding protein_coding MGP_WSBEiJ_T0010861.1 MGP_WSBEiJ_G0009018.1 mouse_genomes_project 9 18410134 18410204 - Mir199a-1 miRNA miRNA MGP_WSBEiJ_T0089752.1 MGP_WSBEiJ_G0033458.1 mouse_genomes_project 9 4906901 4932949 - MGP_WSBEiJ_P0089752 9230110C19Rik protein_coding protein_coding MGP_WSBEiJ_T0099866.1 MGP_WSBEiJ_G0038529.1 mouse_genomes_project 9 69760436 69760549 + Gm24615 snoRNA snoRNA MGP_WSBEiJ_T0090733.1 MGP_WSBEiJ_G0033855.1 mouse_genomes_project 9 43530538 43557866 + MGP_WSBEiJ_P0090733 Fxyd6 protein_coding protein_coding MGP_WSBEiJ_T0005447.1 MGP_WSBEiJ_G0004594.1 mouse_genomes_project 9 107094697 107095476 - Gm28959 antisense antisense MGP_WSBEiJ_T0098595.1 MGP_WSBEiJ_G0037258.1 mouse_genomes_project 9 43812838 43812945 - Gm22069 snRNA snRNA MGP_WSBEiJ_T0005435.1 MGP_WSBEiJ_G0004584.1 mouse_genomes_project 9 99596625 99602333 - 4930422M22Rik antisense antisense MGP_WSBEiJ_T0009202.1 MGP_WSBEiJ_G0007401.1 mouse_genomes_project 9 121473160 121475321 - Gm2449 lincRNA lincRNA MGP_WSBEiJ_T0093453.1 MGP_WSBEiJ_G0034457.1 mouse_genomes_project 9 111341156 111364221 - MGP_WSBEiJ_P0093453 Ptpn23 protein_coding protein_coding MGP_WSBEiJ_T0093454.1 MGP_WSBEiJ_G0034457.1 mouse_genomes_project 9 111341398 111342322 - MGP_WSBEiJ_P0093454 Ptpn23 protein_coding protein_coding MGP_WSBEiJ_T0093455.1 MGP_WSBEiJ_G0034457.1 mouse_genomes_project 9 111341914 111342724 - Ptpn23 protein_coding retained_intron MGP_WSBEiJ_T0093456.1 MGP_WSBEiJ_G0034457.1 mouse_genomes_project 9 111345313 111346538 - Ptpn23 protein_coding retained_intron MGP_WSBEiJ_T0092507.1 MGP_WSBEiJ_G0034308.1 mouse_genomes_project 9 103578349 103634449 + Rab6b protein_coding processed_transcript MGP_WSBEiJ_T0092508.1 MGP_WSBEiJ_G0034308.1 mouse_genomes_project 9 103578369 103657069 + MGP_WSBEiJ_P0092508 Rab6b protein_coding protein_coding MGP_WSBEiJ_T0090154.1 MGP_WSBEiJ_G0033619.1 mouse_genomes_project 9 23863347 23908770 - MGP_WSBEiJ_P0090154 Glb1l2 protein_coding protein_coding MGP_WSBEiJ_T0090155.1 MGP_WSBEiJ_G0033619.1 mouse_genomes_project 9 23863348 23908806 - MGP_WSBEiJ_P0090155 Glb1l2 protein_coding protein_coding MGP_WSBEiJ_T0090156.1 MGP_WSBEiJ_G0033619.1 mouse_genomes_project 9 23864071 23908759 - MGP_WSBEiJ_P0090156 Glb1l2 protein_coding protein_coding MGP_WSBEiJ_T0090157.1 MGP_WSBEiJ_G0033619.1 mouse_genomes_project 9 23865506 23904922 - MGP_WSBEiJ_P0090157 Glb1l2 protein_coding protein_coding MGP_WSBEiJ_T0090158.1 MGP_WSBEiJ_G0033619.1 mouse_genomes_project 9 23867800 23868774 - Glb1l2 protein_coding retained_intron MGP_WSBEiJ_T0090159.1 MGP_WSBEiJ_G0033619.1 mouse_genomes_project 9 23875556 23894558 - Glb1l2 protein_coding retained_intron MGP_WSBEiJ_T0090160.1 MGP_WSBEiJ_G0033619.1 mouse_genomes_project 9 23882239 23908760 - MGP_WSBEiJ_P0090160 Glb1l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0005440.1 MGP_WSBEiJ_G0004589.1 mouse_genomes_project 9 105901312 105910278 + antisense antisense MGP_WSBEiJ_T0090459.1 MGP_WSBEiJ_G0033744.1 mouse_genomes_project 9 36793210 36794196 + MGP_WSBEiJ_P0090459 protein_coding protein_coding MGP_WSBEiJ_T0090759.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44128688 44145815 - MGP_WSBEiJ_P0090759 Sidt2 protein_coding protein_coding MGP_WSBEiJ_T0090760.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44128706 44145545 - MGP_WSBEiJ_P0090760 Sidt2 protein_coding protein_coding MGP_WSBEiJ_T0090761.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44130136 44132073 - MGP_WSBEiJ_P0090761 Sidt2 protein_coding protein_coding MGP_WSBEiJ_T0090762.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44133010 44135210 - Sidt2 protein_coding retained_intron MGP_WSBEiJ_T0090763.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44133438 44135612 - Sidt2 protein_coding retained_intron MGP_WSBEiJ_T0090764.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44134260 44137366 - MGP_WSBEiJ_P0090764 Sidt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090765.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44134952 44138370 - Sidt2 protein_coding retained_intron MGP_WSBEiJ_T0090766.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44135781 44138834 - MGP_WSBEiJ_P0090766 Sidt2 protein_coding protein_coding MGP_WSBEiJ_T0090767.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44135869 44145749 - MGP_WSBEiJ_P0090767 Sidt2 protein_coding protein_coding MGP_WSBEiJ_T0090768.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44135931 44142399 - MGP_WSBEiJ_P0090768 Sidt2 protein_coding protein_coding MGP_WSBEiJ_T0090769.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44136247 44142340 - MGP_WSBEiJ_P0090769 Sidt2 protein_coding protein_coding MGP_WSBEiJ_T0090770.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44136284 44142572 - MGP_WSBEiJ_P0090770 Sidt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090771.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44136319 44138886 - MGP_WSBEiJ_P0090771 Sidt2 protein_coding protein_coding MGP_WSBEiJ_T0090772.1 MGP_WSBEiJ_G0033863.1 mouse_genomes_project 9 44143008 44145802 - Sidt2 protein_coding retained_intron MGP_WSBEiJ_T0092112.1 MGP_WSBEiJ_G0034220.1 mouse_genomes_project 9 87130766 87196595 - MGP_WSBEiJ_P0092112 Cep162 protein_coding protein_coding MGP_WSBEiJ_T0092113.1 MGP_WSBEiJ_G0034220.1 mouse_genomes_project 9 87145178 87150554 - Cep162 protein_coding processed_transcript MGP_WSBEiJ_T0092114.1 MGP_WSBEiJ_G0034220.1 mouse_genomes_project 9 87166300 87170020 - Cep162 protein_coding retained_intron MGP_WSBEiJ_T0092115.1 MGP_WSBEiJ_G0034220.1 mouse_genomes_project 9 87167052 87196347 - Cep162 protein_coding retained_intron MGP_WSBEiJ_T0005466.1 MGP_WSBEiJ_G0004608.1 mouse_genomes_project 9 109829805 109834583 - Gm7628 antisense antisense MGP_WSBEiJ_T0097476.1 MGP_WSBEiJ_G0036144.1 mouse_genomes_project 9 26809940 26811967 - Gm15521 sense_intronic sense_intronic MGP_WSBEiJ_T0002366.1 MGP_WSBEiJ_G0002282.1 mouse_genomes_project 9 91343309 91348898 - TEC TEC MGP_WSBEiJ_T0092883.1 MGP_WSBEiJ_G0034378.1 mouse_genomes_project 9 108272121 108277574 + MGP_WSBEiJ_P0092883 Ifrd2 protein_coding protein_coding MGP_WSBEiJ_T0092884.1 MGP_WSBEiJ_G0034378.1 mouse_genomes_project 9 108272205 108277574 + Ifrd2 protein_coding retained_intron MGP_WSBEiJ_T0092885.1 MGP_WSBEiJ_G0034378.1 mouse_genomes_project 9 108272236 108276173 + MGP_WSBEiJ_P0092885 Ifrd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092886.1 MGP_WSBEiJ_G0034378.1 mouse_genomes_project 9 108274914 108275786 + Ifrd2 protein_coding retained_intron MGP_WSBEiJ_T0092887.1 MGP_WSBEiJ_G0034378.1 mouse_genomes_project 9 108275585 108277238 + MGP_WSBEiJ_P0092887 Ifrd2 protein_coding protein_coding MGP_WSBEiJ_T0092888.1 MGP_WSBEiJ_G0034378.1 mouse_genomes_project 9 108276614 108277284 + MGP_WSBEiJ_P0092888 Ifrd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092889.1 MGP_WSBEiJ_G0034378.1 mouse_genomes_project 9 108277156 108277925 + Ifrd2 protein_coding processed_transcript MGP_WSBEiJ_T0015594.1 MGP_WSBEiJ_G0013724.1 mouse_genomes_project 9 92411794 92412322 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091137.1 MGP_WSBEiJ_G0033984.1 mouse_genomes_project 9 56121151 56133178 + MGP_WSBEiJ_P0091137 Cox5a protein_coding protein_coding MGP_WSBEiJ_T0005484.1 MGP_WSBEiJ_G0004622.1 mouse_genomes_project 9 123518489 123529470 + Gm17163 antisense antisense MGP_WSBEiJ_T0002418.1 MGP_WSBEiJ_G0002334.1 mouse_genomes_project 9 109595744 109596086 + TEC TEC MGP_WSBEiJ_T0005346.1 MGP_WSBEiJ_G0004526.1 mouse_genomes_project 9 29863691 29872083 + Gm27201 antisense antisense MGP_WSBEiJ_T0091881.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77021865 77137480 - MGP_WSBEiJ_P0091881 Lrrc1 protein_coding protein_coding MGP_WSBEiJ_T0091882.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77022022 77136705 - MGP_WSBEiJ_P0091882 Lrrc1 protein_coding protein_coding MGP_WSBEiJ_T0091883.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77022116 77040701 - Lrrc1 protein_coding processed_transcript MGP_WSBEiJ_T0091884.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77022131 77034210 - MGP_WSBEiJ_P0091884 Lrrc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091885.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77026087 77034506 - Lrrc1 protein_coding retained_intron MGP_WSBEiJ_T0091886.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77040706 77137460 - MGP_WSBEiJ_P0091886 Lrrc1 protein_coding protein_coding MGP_WSBEiJ_T0091887.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77050083 77092963 - Lrrc1 protein_coding processed_transcript MGP_WSBEiJ_T0091888.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77064125 77137458 - Lrrc1 protein_coding processed_transcript MGP_WSBEiJ_T0091889.1 MGP_WSBEiJ_G0034168.1 mouse_genomes_project 9 77133123 77137400 - Lrrc1 protein_coding retained_intron MGP_WSBEiJ_T0090431.1 MGP_WSBEiJ_G0033722.1 mouse_genomes_project 9 36151856 36152796 + MGP_WSBEiJ_P0090431 Olfr911-ps1 protein_coding protein_coding MGP_WSBEiJ_T0090708.1 MGP_WSBEiJ_G0033844.1 mouse_genomes_project 9 43139758 43150652 - MGP_WSBEiJ_P0090708 Cd3e protein_coding protein_coding MGP_WSBEiJ_T0091439.1 MGP_WSBEiJ_G0034065.1 mouse_genomes_project 9 64035342 64085288 + MGP_WSBEiJ_P0091439 Dpp8 protein_coding protein_coding MGP_WSBEiJ_T0091440.1 MGP_WSBEiJ_G0034065.1 mouse_genomes_project 9 64035606 64083628 + MGP_WSBEiJ_P0091440 Dpp8 protein_coding protein_coding MGP_WSBEiJ_T0093760.1 MGP_WSBEiJ_G0034533.1 mouse_genomes_project 9 121475352 121507050 + MGP_WSBEiJ_P0093760 Wdr48 protein_coding protein_coding MGP_WSBEiJ_T0090961.1 MGP_WSBEiJ_G0033927.1 mouse_genomes_project 9 51876691 51904174 + MGP_WSBEiJ_P0090961 4930550C14Rik protein_coding protein_coding MGP_WSBEiJ_T0098596.1 MGP_WSBEiJ_G0037259.1 mouse_genomes_project 9 44068270 44068369 - Gm24646 snRNA snRNA MGP_WSBEiJ_T0015513.1 MGP_WSBEiJ_G0013643.1 mouse_genomes_project 9 28554586 28554964 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093535.1 MGP_WSBEiJ_G0034475.1 mouse_genomes_project 9 111908832 111910943 - MGP_WSBEiJ_P0093535 Gm590 protein_coding protein_coding MGP_WSBEiJ_T0090022.1 MGP_WSBEiJ_G0033568.1 mouse_genomes_project 9 18196658 18213384 - MGP_WSBEiJ_P0090022 Ap1m2 protein_coding protein_coding MGP_WSBEiJ_T0090023.1 MGP_WSBEiJ_G0033568.1 mouse_genomes_project 9 18196658 18213384 - MGP_WSBEiJ_P0090023 Ap1m2 protein_coding protein_coding MGP_WSBEiJ_T0090548.1 MGP_WSBEiJ_G0033794.1 mouse_genomes_project 9 40228199 40238446 - MGP_WSBEiJ_P0090548 Sc5d protein_coding protein_coding MGP_WSBEiJ_T0090549.1 MGP_WSBEiJ_G0033794.1 mouse_genomes_project 9 40228826 40238346 - MGP_WSBEiJ_P0090549 Sc5d protein_coding protein_coding MGP_WSBEiJ_T0093889.1 MGP_WSBEiJ_G0034576.1 mouse_genomes_project 9 124695447 124701369 - MGP_WSBEiJ_P0093889 1110059G10Rik protein_coding protein_coding MGP_WSBEiJ_T0093890.1 MGP_WSBEiJ_G0034576.1 mouse_genomes_project 9 124697892 124701322 - MGP_WSBEiJ_P0093890 1110059G10Rik protein_coding protein_coding MGP_WSBEiJ_T0091939.1 MGP_WSBEiJ_G0034188.1 mouse_genomes_project 9 78249152 78294668 - MGP_WSBEiJ_P0091939 Slc17a5 protein_coding protein_coding MGP_WSBEiJ_T0091940.1 MGP_WSBEiJ_G0034188.1 mouse_genomes_project 9 78249170 78294642 - MGP_WSBEiJ_P0091940 Slc17a5 protein_coding protein_coding MGP_WSBEiJ_T0091941.1 MGP_WSBEiJ_G0034188.1 mouse_genomes_project 9 78275137 78294654 - MGP_WSBEiJ_P0091941 Slc17a5 protein_coding protein_coding MGP_WSBEiJ_T0090128.1 MGP_WSBEiJ_G0033609.1 mouse_genomes_project 9 20256708 20517625 + MGP_WSBEiJ_P0090128 Bmper protein_coding protein_coding MGP_WSBEiJ_T0091458.1 MGP_WSBEiJ_G0034076.1 mouse_genomes_project 9 64468670 64485891 + MGP_WSBEiJ_P0091458 Mtfmt protein_coding protein_coding MGP_WSBEiJ_T0091459.1 MGP_WSBEiJ_G0034076.1 mouse_genomes_project 9 64468676 64485250 + Mtfmt protein_coding retained_intron MGP_WSBEiJ_T0091460.1 MGP_WSBEiJ_G0034076.1 mouse_genomes_project 9 64469895 64480082 + Mtfmt protein_coding processed_transcript MGP_WSBEiJ_T0091461.1 MGP_WSBEiJ_G0034076.1 mouse_genomes_project 9 64476364 64484958 + Mtfmt protein_coding retained_intron MGP_WSBEiJ_T0090758.1 MGP_WSBEiJ_G0033862.1 mouse_genomes_project 9 44120400 44126891 - MGP_WSBEiJ_P0090758 Tagln protein_coding protein_coding MGP_WSBEiJ_T0009164.1 MGP_WSBEiJ_G0007371.1 mouse_genomes_project 9 99668626 99670074 + Gm28087 lincRNA lincRNA MGP_WSBEiJ_T0097484.1 MGP_WSBEiJ_G0036152.1 mouse_genomes_project 9 116513076 116518527 + sense_intronic sense_intronic MGP_WSBEiJ_T0010854.1 MGP_WSBEiJ_G0009011.1 mouse_genomes_project 9 12121666 12121725 + Mir7650 miRNA miRNA MGP_WSBEiJ_T0091480.1 MGP_WSBEiJ_G0034083.1 mouse_genomes_project 9 64749578 64887324 - MGP_WSBEiJ_P0091480 Zfp609 protein_coding protein_coding MGP_WSBEiJ_T0091481.1 MGP_WSBEiJ_G0034083.1 mouse_genomes_project 9 64757058 64758333 - Zfp609 protein_coding processed_transcript MGP_WSBEiJ_T0091482.1 MGP_WSBEiJ_G0034083.1 mouse_genomes_project 9 64853784 64856429 - MGP_WSBEiJ_P0091482 Zfp609 protein_coding protein_coding MGP_WSBEiJ_T0002428.1 MGP_WSBEiJ_G0002344.1 mouse_genomes_project 9 112427397 112428881 + TEC TEC MGP_WSBEiJ_T0092509.1 MGP_WSBEiJ_G0034309.1 mouse_genomes_project 9 103659699 103675360 - MGP_WSBEiJ_P0092509 Srprb protein_coding protein_coding MGP_WSBEiJ_T0092510.1 MGP_WSBEiJ_G0034309.1 mouse_genomes_project 9 103660757 103675352 - Srprb protein_coding retained_intron MGP_WSBEiJ_T0092512.1 MGP_WSBEiJ_G0034309.1 mouse_genomes_project 9 103661814 103663720 - Srprb protein_coding processed_transcript MGP_WSBEiJ_T0090100.1 MGP_WSBEiJ_G0033596.1 mouse_genomes_project 9 19079277 19091575 + MGP_WSBEiJ_P0090100 Cnn1 protein_coding protein_coding MGP_WSBEiJ_T0092116.1 MGP_WSBEiJ_G0034221.1 mouse_genomes_project 9 87640329 87669691 - MGP_WSBEiJ_P0092116 Tbx18 protein_coding protein_coding MGP_WSBEiJ_T0092117.1 MGP_WSBEiJ_G0034221.1 mouse_genomes_project 9 87662776 87668932 - Tbx18 protein_coding processed_transcript MGP_WSBEiJ_T0093788.1 MGP_WSBEiJ_G0034545.1 mouse_genomes_project 9 122167863 122200528 + MGP_WSBEiJ_P0093788 Entpd3 protein_coding protein_coding MGP_WSBEiJ_T0093789.1 MGP_WSBEiJ_G0034545.1 mouse_genomes_project 9 122190271 122193180 + Entpd3 protein_coding retained_intron MGP_WSBEiJ_T0015508.1 MGP_WSBEiJ_G0013638.1 mouse_genomes_project 9 21876950 21877944 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092040.1 MGP_WSBEiJ_G0034206.1 mouse_genomes_project 9 83775834 83967950 + MGP_WSBEiJ_P0092040 Bckdhb protein_coding protein_coding MGP_WSBEiJ_T0092041.1 MGP_WSBEiJ_G0034206.1 mouse_genomes_project 9 83775859 83908384 + MGP_WSBEiJ_P0092041 Bckdhb protein_coding protein_coding MGP_WSBEiJ_T0092042.1 MGP_WSBEiJ_G0034206.1 mouse_genomes_project 9 83793684 83967951 + MGP_WSBEiJ_P0092042 Bckdhb protein_coding protein_coding MGP_WSBEiJ_T0092043.1 MGP_WSBEiJ_G0034206.1 mouse_genomes_project 9 83873082 83967909 + Bckdhb protein_coding processed_transcript MGP_WSBEiJ_T0092044.1 MGP_WSBEiJ_G0034206.1 mouse_genomes_project 9 83884389 83967950 + Bckdhb protein_coding processed_transcript MGP_WSBEiJ_T0092045.1 MGP_WSBEiJ_G0034206.1 mouse_genomes_project 9 83950553 83967951 + Bckdhb protein_coding processed_transcript MGP_WSBEiJ_T0093483.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111591230 111620599 - MGP_WSBEiJ_P0093483 Nbeal2 protein_coding protein_coding MGP_WSBEiJ_T0093484.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111591230 111620599 - MGP_WSBEiJ_P0093484 Nbeal2 protein_coding protein_coding MGP_WSBEiJ_T0093485.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111591313 111620580 - MGP_WSBEiJ_P0093485 Nbeal2 protein_coding protein_coding MGP_WSBEiJ_T0093486.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111591484 111598491 - MGP_WSBEiJ_P0093486 Nbeal2 protein_coding protein_coding MGP_WSBEiJ_T0093487.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111591484 111605057 - MGP_WSBEiJ_P0093487 Nbeal2 protein_coding protein_coding MGP_WSBEiJ_T0093488.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111594677 111595320 - Nbeal2 protein_coding retained_intron MGP_WSBEiJ_T0093489.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111595349 111596110 - Nbeal2 protein_coding retained_intron MGP_WSBEiJ_T0093490.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111596011 111600889 - MGP_WSBEiJ_P0093490 Nbeal2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093491.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111597505 111598320 - Nbeal2 protein_coding retained_intron MGP_WSBEiJ_T0093492.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111601059 111601527 - Nbeal2 protein_coding retained_intron MGP_WSBEiJ_T0093493.1 MGP_WSBEiJ_G0034463.1 mouse_genomes_project 9 111604757 111611806 - MGP_WSBEiJ_P0093493 Nbeal2 protein_coding protein_coding MGP_WSBEiJ_T0002377.1 MGP_WSBEiJ_G0002293.1 mouse_genomes_project 9 98743963 98745138 + TEC TEC MGP_WSBEiJ_T0098583.1 MGP_WSBEiJ_G0037246.1 mouse_genomes_project 9 17069405 17069550 - Gm26290 snRNA snRNA MGP_WSBEiJ_T0015607.1 MGP_WSBEiJ_G0013737.1 mouse_genomes_project 9 96726930 96727624 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0005436.1 MGP_WSBEiJ_G0004585.1 mouse_genomes_project 9 100031935 100075132 + Gm16004 antisense antisense MGP_WSBEiJ_T0009088.1 MGP_WSBEiJ_G0007312.1 mouse_genomes_project 9 43578360 43593517 - 4833428L15Rik lincRNA lincRNA MGP_WSBEiJ_T0090480.1 MGP_WSBEiJ_G0033759.1 mouse_genomes_project 9 37458728 37459664 + MGP_WSBEiJ_P0090480 Olfr963 protein_coding protein_coding MGP_WSBEiJ_T0005449.1 MGP_WSBEiJ_G0004596.1 mouse_genomes_project 9 107573045 107575340 + 4930524O07Rik antisense antisense MGP_WSBEiJ_T0005450.1 MGP_WSBEiJ_G0004596.1 mouse_genomes_project 9 107573669 107575338 + 4930524O07Rik antisense antisense MGP_WSBEiJ_T0005451.1 MGP_WSBEiJ_G0004596.1 mouse_genomes_project 9 107574112 107576687 + 4930524O07Rik antisense antisense MGP_WSBEiJ_T0092373.1 MGP_WSBEiJ_G0034281.1 mouse_genomes_project 9 99529762 99537554 - MGP_WSBEiJ_P0092373 Faiml protein_coding protein_coding MGP_WSBEiJ_T0092374.1 MGP_WSBEiJ_G0034281.1 mouse_genomes_project 9 99529854 99536685 - MGP_WSBEiJ_P0092374 Faiml protein_coding protein_coding MGP_WSBEiJ_T0015572.1 MGP_WSBEiJ_G0013702.1 mouse_genomes_project 9 82329340 82329668 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091931.1 MGP_WSBEiJ_G0034185.1 mouse_genomes_project 9 78147699 78148621 - MGP_WSBEiJ_P0091931 Gm17324 protein_coding protein_coding MGP_WSBEiJ_T0092467.1 MGP_WSBEiJ_G0034301.1 mouse_genomes_project 9 102938187 102980706 + MGP_WSBEiJ_P0092467 Ky protein_coding protein_coding MGP_WSBEiJ_T0092468.1 MGP_WSBEiJ_G0034301.1 mouse_genomes_project 9 102954826 102961516 + Ky protein_coding retained_intron MGP_WSBEiJ_T0090757.1 MGP_WSBEiJ_G0033861.1 mouse_genomes_project 9 44096746 44120465 + MGP_WSBEiJ_P0090757 Pcsk7 protein_coding protein_coding MGP_WSBEiJ_T0093333.1 MGP_WSBEiJ_G0034439.1 mouse_genomes_project 9 109793152 109808987 - MGP_WSBEiJ_P0093333 Atrip protein_coding protein_coding MGP_WSBEiJ_T0093334.1 MGP_WSBEiJ_G0034439.1 mouse_genomes_project 9 109793190 109808915 - MGP_WSBEiJ_P0093334 Atrip protein_coding protein_coding MGP_WSBEiJ_T0093335.1 MGP_WSBEiJ_G0034439.1 mouse_genomes_project 9 109793215 109797137 - Atrip protein_coding retained_intron MGP_WSBEiJ_T0093336.1 MGP_WSBEiJ_G0034439.1 mouse_genomes_project 9 109794066 109800241 - MGP_WSBEiJ_P0093336 Atrip protein_coding protein_coding MGP_WSBEiJ_T0093337.1 MGP_WSBEiJ_G0034439.1 mouse_genomes_project 9 109802323 109804377 - Atrip protein_coding retained_intron MGP_WSBEiJ_T0093338.1 MGP_WSBEiJ_G0034439.1 mouse_genomes_project 9 109806601 109808929 - Atrip protein_coding retained_intron MGP_WSBEiJ_T0092775.1 MGP_WSBEiJ_G0034359.1 mouse_genomes_project 9 107500925 107562398 + MGP_WSBEiJ_P0092775 Vprbp protein_coding protein_coding MGP_WSBEiJ_T0092776.1 MGP_WSBEiJ_G0034359.1 mouse_genomes_project 9 107508604 107562479 + MGP_WSBEiJ_P0092776 Vprbp protein_coding protein_coding MGP_WSBEiJ_T0092778.1 MGP_WSBEiJ_G0034359.1 mouse_genomes_project 9 107529730 107531929 + Vprbp protein_coding retained_intron MGP_WSBEiJ_T0092780.1 MGP_WSBEiJ_G0034359.1 mouse_genomes_project 9 107555819 107561701 + MGP_WSBEiJ_P0092780 Vprbp protein_coding protein_coding MGP_WSBEiJ_T0009182.1 MGP_WSBEiJ_G0007387.1 mouse_genomes_project 9 109313388 109315030 + 4833445I07Rik lincRNA lincRNA MGP_WSBEiJ_T0009183.1 MGP_WSBEiJ_G0007387.1 mouse_genomes_project 9 109313748 109314630 + 4833445I07Rik lincRNA lincRNA MGP_WSBEiJ_T0090404.1 MGP_WSBEiJ_G0033696.1 mouse_genomes_project 9 35443359 35444295 + MGP_WSBEiJ_P0090404 Olfr877 protein_coding protein_coding MGP_WSBEiJ_T0090854.1 MGP_WSBEiJ_G0033898.1 mouse_genomes_project 9 48954373 48960588 + MGP_WSBEiJ_P0090854 Il18 protein_coding protein_coding MGP_WSBEiJ_T0090855.1 MGP_WSBEiJ_G0033898.1 mouse_genomes_project 9 48954373 48960588 + MGP_WSBEiJ_P0090855 Il18 protein_coding protein_coding MGP_WSBEiJ_T0097478.1 MGP_WSBEiJ_G0036146.1 mouse_genomes_project 9 54764725 54766200 - Gm29322 sense_intronic sense_intronic MGP_WSBEiJ_T0091068.1 MGP_WSBEiJ_G0033961.1 mouse_genomes_project 9 54081235 54439056 - MGP_WSBEiJ_P0091068 Scaper protein_coding protein_coding MGP_WSBEiJ_T0091069.1 MGP_WSBEiJ_G0033961.1 mouse_genomes_project 9 54269343 54460484 - MGP_WSBEiJ_P0091069 Scaper protein_coding unknown_likely_coding MGP_WSBEiJ_T0090815.1 MGP_WSBEiJ_G0033876.1 mouse_genomes_project 9 46665618 46698871 + MGP_WSBEiJ_P0090815 Nxpe4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090428.1 MGP_WSBEiJ_G0033719.1 mouse_genomes_project 9 36100133 36101070 + MGP_WSBEiJ_P0090428 Olfr905 protein_coding protein_coding MGP_WSBEiJ_T0002324.1 MGP_WSBEiJ_G0002241.1 mouse_genomes_project 9 71360553 71362200 - TEC TEC MGP_WSBEiJ_T0092750.1 MGP_WSBEiJ_G0034352.1 mouse_genomes_project 9 107139564 107188750 - Iqcf3 protein_coding processed_transcript MGP_WSBEiJ_T0092752.1 MGP_WSBEiJ_G0034352.1 mouse_genomes_project 9 107187446 107207153 - MGP_WSBEiJ_P0092752 Iqcf3 protein_coding protein_coding MGP_WSBEiJ_T0092753.1 MGP_WSBEiJ_G0034352.1 mouse_genomes_project 9 107187855 107207151 - MGP_WSBEiJ_P0092753 Iqcf3 protein_coding protein_coding MGP_WSBEiJ_T0092754.1 MGP_WSBEiJ_G0034352.1 mouse_genomes_project 9 107197237 107207121 - MGP_WSBEiJ_P0092754 Iqcf3 protein_coding protein_coding MGP_WSBEiJ_T0092755.1 MGP_WSBEiJ_G0034352.1 mouse_genomes_project 9 107197783 107207121 - MGP_WSBEiJ_P0092755 Iqcf3 protein_coding protein_coding MGP_WSBEiJ_T0009075.1 MGP_WSBEiJ_G0007302.1 mouse_genomes_project 9 33400938 33409903 - lincRNA lincRNA MGP_WSBEiJ_T0009076.1 MGP_WSBEiJ_G0007302.1 mouse_genomes_project 9 33400985 33410018 - lincRNA lincRNA MGP_WSBEiJ_T0090641.1 MGP_WSBEiJ_G0033826.1 mouse_genomes_project 9 42499380 42502072 + MGP_WSBEiJ_P0090641 Rps25 protein_coding protein_coding MGP_WSBEiJ_T0090310.1 MGP_WSBEiJ_G0033662.1 mouse_genomes_project 9 33153517 33154719 + MGP_WSBEiJ_P0090310 Gm17677 protein_coding protein_coding MGP_WSBEiJ_T0099872.1 MGP_WSBEiJ_G0038535.1 mouse_genomes_project 9 85374063 85374199 + Gm25125 snoRNA snoRNA MGP_WSBEiJ_T0091701.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71632941 71704289 + MGP_WSBEiJ_P0091701 Zfp280d protein_coding protein_coding MGP_WSBEiJ_T0091702.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71632968 71736071 + MGP_WSBEiJ_P0091702 Zfp280d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091703.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71632969 71737158 + MGP_WSBEiJ_P0091703 Zfp280d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091704.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71632977 71649264 + Zfp280d protein_coding processed_transcript MGP_WSBEiJ_T0091705.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71633041 71647952 + Zfp280d protein_coding processed_transcript MGP_WSBEiJ_T0091706.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71633043 71659439 + Zfp280d protein_coding retained_intron MGP_WSBEiJ_T0091707.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71655551 71737175 + MGP_WSBEiJ_P0091707 Zfp280d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091708.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71655583 71737430 + MGP_WSBEiJ_P0091708 Zfp280d protein_coding protein_coding MGP_WSBEiJ_T0091709.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71658990 71686270 + MGP_WSBEiJ_P0091709 Zfp280d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091710.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71670112 71672219 + Zfp280d protein_coding retained_intron MGP_WSBEiJ_T0091711.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71675066 71676645 + Zfp280d protein_coding processed_transcript MGP_WSBEiJ_T0091712.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71675106 71687329 + MGP_WSBEiJ_P0091712 Zfp280d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091713.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71675628 71682978 + Zfp280d protein_coding retained_intron MGP_WSBEiJ_T0091714.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71686276 71692529 + Zfp280d protein_coding retained_intron MGP_WSBEiJ_T0091715.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71691468 71693557 + Zfp280d protein_coding retained_intron MGP_WSBEiJ_T0091716.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71694301 71697805 + Zfp280d protein_coding retained_intron MGP_WSBEiJ_T0091717.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71694347 71735607 + MGP_WSBEiJ_P0091717 Zfp280d protein_coding protein_coding MGP_WSBEiJ_T0091718.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71701969 71736328 + MGP_WSBEiJ_P0091718 Zfp280d protein_coding protein_coding MGP_WSBEiJ_T0091719.1 MGP_WSBEiJ_G0034129.1 mouse_genomes_project 9 71728090 71737286 + MGP_WSBEiJ_P0091719 Zfp280d protein_coding protein_coding MGP_WSBEiJ_T0093513.1 MGP_WSBEiJ_G0034468.1 mouse_genomes_project 9 111794911 111800313 + MGP_WSBEiJ_P0093513 Prss44 protein_coding protein_coding MGP_WSBEiJ_T0093514.1 MGP_WSBEiJ_G0034468.1 mouse_genomes_project 9 111794944 111806789 + MGP_WSBEiJ_P0093514 Prss44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093515.1 MGP_WSBEiJ_G0034468.1 mouse_genomes_project 9 111796762 111798840 + MGP_WSBEiJ_P0093515 Prss44 protein_coding protein_coding MGP_WSBEiJ_T0093516.1 MGP_WSBEiJ_G0034468.1 mouse_genomes_project 9 111797527 111799262 + Prss44 protein_coding retained_intron MGP_WSBEiJ_T0090116.1 MGP_WSBEiJ_G0033607.1 mouse_genomes_project 9 19469054 19476824 + MGP_WSBEiJ_P0090116 Gm17545 protein_coding protein_coding MGP_WSBEiJ_T0090482.1 MGP_WSBEiJ_G0033761.1 mouse_genomes_project 9 37514713 37515652 + MGP_WSBEiJ_P0090482 Olfr965 protein_coding protein_coding MGP_WSBEiJ_T0090802.1 MGP_WSBEiJ_G0033873.1 mouse_genomes_project 9 45246698 45250650 + MGP_WSBEiJ_P0090802 Gm4791 protein_coding protein_coding MGP_WSBEiJ_T0089898.1 MGP_WSBEiJ_G0033512.1 mouse_genomes_project 9 15860501 15861440 + MGP_WSBEiJ_P0089898 Olfr834 protein_coding protein_coding MGP_WSBEiJ_T0090391.1 MGP_WSBEiJ_G0033688.1 mouse_genomes_project 9 35103564 35111949 - MGP_WSBEiJ_P0090391 Nrgn protein_coding protein_coding MGP_WSBEiJ_T0090392.1 MGP_WSBEiJ_G0033688.1 mouse_genomes_project 9 35104026 35105211 - Nrgn protein_coding processed_transcript MGP_WSBEiJ_T0090511.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38148075 38201092 - MGP_WSBEiJ_P0090511 Gramd1b protein_coding protein_coding MGP_WSBEiJ_T0090512.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38148081 38400575 - MGP_WSBEiJ_P0090512 Gramd1b protein_coding protein_coding MGP_WSBEiJ_T0090513.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38148084 38200718 - MGP_WSBEiJ_P0090513 Gramd1b protein_coding protein_coding MGP_WSBEiJ_T0090514.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38148087 38322287 - MGP_WSBEiJ_P0090514 Gramd1b protein_coding protein_coding MGP_WSBEiJ_T0090515.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38152720 38250267 - MGP_WSBEiJ_P0090515 Gramd1b protein_coding protein_coding MGP_WSBEiJ_T0090516.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38152751 38322381 - MGP_WSBEiJ_P0090516 Gramd1b protein_coding protein_coding MGP_WSBEiJ_T0090517.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38154841 38161807 - Gramd1b protein_coding retained_intron MGP_WSBEiJ_T0090518.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38171534 38188313 - Gramd1b protein_coding retained_intron MGP_WSBEiJ_T0090519.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38172298 38250565 - Gramd1b protein_coding processed_transcript MGP_WSBEiJ_T0090520.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38172300 38250551 - Gramd1b protein_coding processed_transcript MGP_WSBEiJ_T0090521.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38188270 38333975 - Gramd1b protein_coding processed_transcript MGP_WSBEiJ_T0090522.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38188283 38333965 - Gramd1b protein_coding processed_transcript MGP_WSBEiJ_T0090523.1 MGP_WSBEiJ_G0033784.1 mouse_genomes_project 9 38188330 38233430 - Gramd1b protein_coding processed_transcript MGP_WSBEiJ_T0099870.1 MGP_WSBEiJ_G0038533.1 mouse_genomes_project 9 77641889 77642016 - Gm23609 snoRNA snoRNA MGP_WSBEiJ_T0092933.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108368598 108397409 - MGP_WSBEiJ_P0092933 Sema3f protein_coding protein_coding MGP_WSBEiJ_T0092934.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108369517 108392491 - MGP_WSBEiJ_P0092934 Sema3f protein_coding protein_coding MGP_WSBEiJ_T0092935.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108370221 108371862 - Sema3f protein_coding retained_intron MGP_WSBEiJ_T0092936.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108370221 108396953 - MGP_WSBEiJ_P0092936 Sema3f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092937.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108371091 108374298 - MGP_WSBEiJ_P0092937 Sema3f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092938.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108371107 108371898 - Sema3f protein_coding retained_intron MGP_WSBEiJ_T0092939.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108371230 108371872 - Sema3f protein_coding retained_intron MGP_WSBEiJ_T0092940.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108374255 108379676 - Sema3f protein_coding processed_transcript MGP_WSBEiJ_T0092941.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108374722 108379604 - MGP_WSBEiJ_P0092941 Sema3f protein_coding protein_coding MGP_WSBEiJ_T0092942.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108374736 108376895 - Sema3f protein_coding retained_intron MGP_WSBEiJ_T0092943.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108375306 108396414 - MGP_WSBEiJ_P0092943 Sema3f protein_coding protein_coding MGP_WSBEiJ_T0092944.1 MGP_WSBEiJ_G0034383.1 mouse_genomes_project 9 108376663 108379665 - MGP_WSBEiJ_P0092944 Sema3f protein_coding protein_coding MGP_WSBEiJ_T0015626.1 MGP_WSBEiJ_G0013756.1 mouse_genomes_project 9 103887705 103888082 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091465.1 MGP_WSBEiJ_G0034079.1 mouse_genomes_project 9 64594769 64622818 - MGP_WSBEiJ_P0091465 Plekho2 protein_coding protein_coding MGP_WSBEiJ_T0002384.1 MGP_WSBEiJ_G0002300.1 mouse_genomes_project 9 101073522 101074493 + TEC TEC MGP_WSBEiJ_T0092799.1 MGP_WSBEiJ_G0034363.1 mouse_genomes_project 9 107923383 107960696 - MGP_WSBEiJ_P0092799 Mapkapk3 protein_coding protein_coding MGP_WSBEiJ_T0092800.1 MGP_WSBEiJ_G0034363.1 mouse_genomes_project 9 107923391 107960566 - Mapkapk3 protein_coding retained_intron MGP_WSBEiJ_T0092801.1 MGP_WSBEiJ_G0034363.1 mouse_genomes_project 9 107924501 107925748 - Mapkapk3 protein_coding retained_intron MGP_WSBEiJ_T0092802.1 MGP_WSBEiJ_G0034363.1 mouse_genomes_project 9 107924640 107960163 - MGP_WSBEiJ_P0092802 Mapkapk3 protein_coding protein_coding MGP_WSBEiJ_T0092803.1 MGP_WSBEiJ_G0034363.1 mouse_genomes_project 9 107927231 107930381 - Mapkapk3 protein_coding processed_transcript MGP_WSBEiJ_T0092804.1 MGP_WSBEiJ_G0034363.1 mouse_genomes_project 9 107928000 107960598 - Mapkapk3 protein_coding retained_intron MGP_WSBEiJ_T0092805.1 MGP_WSBEiJ_G0034363.1 mouse_genomes_project 9 107933247 107950504 - MGP_WSBEiJ_P0092805 Mapkapk3 protein_coding protein_coding MGP_WSBEiJ_T0092806.1 MGP_WSBEiJ_G0034363.1 mouse_genomes_project 9 107955519 107960598 - Mapkapk3 protein_coding processed_transcript MGP_WSBEiJ_T0092478.1 MGP_WSBEiJ_G0034303.1 mouse_genomes_project 9 103059524 103067656 + MGP_WSBEiJ_P0092478 Anapc13 protein_coding protein_coding MGP_WSBEiJ_T0092479.1 MGP_WSBEiJ_G0034303.1 mouse_genomes_project 9 103059552 103067481 + MGP_WSBEiJ_P0092479 Anapc13 protein_coding protein_coding MGP_WSBEiJ_T0092480.1 MGP_WSBEiJ_G0034303.1 mouse_genomes_project 9 103059891 103067473 + MGP_WSBEiJ_P0092480 Anapc13 protein_coding protein_coding MGP_WSBEiJ_T0092481.1 MGP_WSBEiJ_G0034303.1 mouse_genomes_project 9 103059907 103067473 + MGP_WSBEiJ_P0092481 Anapc13 protein_coding protein_coding MGP_WSBEiJ_T0092482.1 MGP_WSBEiJ_G0034303.1 mouse_genomes_project 9 103061736 103062952 + Anapc13 protein_coding retained_intron MGP_WSBEiJ_T0093221.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109350100 109384326 - MGP_WSBEiJ_P0093221 Arih2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093222.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109350103 109402743 - MGP_WSBEiJ_P0093222 Arih2 protein_coding protein_coding MGP_WSBEiJ_T0093223.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109350108 109353775 - Arih2 protein_coding retained_intron MGP_WSBEiJ_T0093224.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109351847 109402748 - MGP_WSBEiJ_P0093224 Arih2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093225.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109351969 109357161 - MGP_WSBEiJ_P0093225 Arih2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093226.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109352104 109354520 - Arih2 protein_coding retained_intron MGP_WSBEiJ_T0093227.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109352435 109355123 - Arih2 protein_coding retained_intron MGP_WSBEiJ_T0093228.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109358373 109402749 - MGP_WSBEiJ_P0093228 Arih2 protein_coding protein_coding MGP_WSBEiJ_T0093229.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109358457 109397494 - MGP_WSBEiJ_P0093229 Arih2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093230.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109363245 109383668 - Arih2 protein_coding retained_intron MGP_WSBEiJ_T0093231.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109364245 109402681 - Arih2 protein_coding retained_intron MGP_WSBEiJ_T0093232.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109365262 109402705 - MGP_WSBEiJ_P0093232 Arih2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093233.1 MGP_WSBEiJ_G0034424.1 mouse_genomes_project 9 109398100 109402732 - Arih2 protein_coding retained_intron MGP_WSBEiJ_T0091463.1 MGP_WSBEiJ_G0034078.1 mouse_genomes_project 9 64535501 64551928 - MGP_WSBEiJ_P0091463 Ankdd1a protein_coding protein_coding MGP_WSBEiJ_T0091464.1 MGP_WSBEiJ_G0034078.1 mouse_genomes_project 9 64535501 64556872 - MGP_WSBEiJ_P0091464 Ankdd1a protein_coding unknown_likely_coding MGP_WSBEiJ_T0093122.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109191540 109205470 - MGP_WSBEiJ_P0093122 Klhdc8b protein_coding protein_coding MGP_WSBEiJ_T0093123.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109191562 109196604 - Klhdc8b protein_coding retained_intron MGP_WSBEiJ_T0093124.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109191562 109194690 - Klhdc8b protein_coding retained_intron MGP_WSBEiJ_T0093125.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109191562 109196263 - MGP_WSBEiJ_P0093125 Klhdc8b protein_coding protein_coding MGP_WSBEiJ_T0093126.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109191735 109196290 - MGP_WSBEiJ_P0093126 Klhdc8b protein_coding protein_coding MGP_WSBEiJ_T0093127.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109191876 109204965 - MGP_WSBEiJ_P0093127 Klhdc8b protein_coding protein_coding MGP_WSBEiJ_T0093128.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109192171 109194257 - Klhdc8b protein_coding processed_transcript MGP_WSBEiJ_T0093129.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109195140 109196652 - Klhdc8b protein_coding processed_transcript MGP_WSBEiJ_T0093130.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109195161 109196687 - Klhdc8b protein_coding retained_intron MGP_WSBEiJ_T0093131.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109196473 109204818 - Klhdc8b protein_coding processed_transcript MGP_WSBEiJ_T0093132.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109198561 109204818 - Klhdc8b protein_coding retained_intron MGP_WSBEiJ_T0093133.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109198563 109200839 - Klhdc8b protein_coding retained_intron MGP_WSBEiJ_T0093134.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109198754 109204962 - Klhdc8b protein_coding processed_transcript MGP_WSBEiJ_T0093135.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109202324 109203967 - Klhdc8b protein_coding retained_intron MGP_WSBEiJ_T0093136.1 MGP_WSBEiJ_G0034413.1 mouse_genomes_project 9 109203121 109204817 - Klhdc8b protein_coding retained_intron MGP_WSBEiJ_T0090787.1 MGP_WSBEiJ_G0033869.1 mouse_genomes_project 9 44470958 44474245 + MGP_WSBEiJ_P0090787 Apoa5 protein_coding protein_coding MGP_WSBEiJ_T0090788.1 MGP_WSBEiJ_G0033869.1 mouse_genomes_project 9 44471403 44474245 + MGP_WSBEiJ_P0090788 Apoa5 protein_coding protein_coding MGP_WSBEiJ_T0089842.1 MGP_WSBEiJ_G0033489.1 mouse_genomes_project 9 12090461 12109273 - MGP_WSBEiJ_P0089842 4931406C07Rik protein_coding protein_coding MGP_WSBEiJ_T0089843.1 MGP_WSBEiJ_G0033489.1 mouse_genomes_project 9 12090461 12114774 - MGP_WSBEiJ_P0089843 4931406C07Rik protein_coding protein_coding MGP_WSBEiJ_T0089844.1 MGP_WSBEiJ_G0033489.1 mouse_genomes_project 9 12090461 12114493 - MGP_WSBEiJ_P0089844 4931406C07Rik protein_coding protein_coding MGP_WSBEiJ_T0005465.1 MGP_WSBEiJ_G0004607.1 mouse_genomes_project 9 108713608 108719907 - Gm38134 antisense antisense MGP_WSBEiJ_T0092149.1 MGP_WSBEiJ_G0034230.1 mouse_genomes_project 9 89143991 89149671 + MGP_WSBEiJ_P0092149 protein_coding protein_coding MGP_WSBEiJ_T0005362.1 MGP_WSBEiJ_G0004539.1 mouse_genomes_project 9 49688494 49694189 + 2010007H06Rik antisense antisense MGP_WSBEiJ_T0005363.1 MGP_WSBEiJ_G0004539.1 mouse_genomes_project 9 49690276 49690902 + 2010007H06Rik antisense antisense MGP_WSBEiJ_T0090416.1 MGP_WSBEiJ_G0033707.1 mouse_genomes_project 9 35806917 35807859 + MGP_WSBEiJ_P0090416 Olfr893 protein_coding protein_coding MGP_WSBEiJ_T0090479.1 MGP_WSBEiJ_G0033758.1 mouse_genomes_project 9 37399002 37400019 + MGP_WSBEiJ_P0090479 Olfr148 protein_coding protein_coding MGP_WSBEiJ_T0093540.1 MGP_WSBEiJ_G0034478.1 mouse_genomes_project 9 111983232 111989553 - MGP_WSBEiJ_P0093540 Rtp3 protein_coding protein_coding MGP_WSBEiJ_T0093541.1 MGP_WSBEiJ_G0034478.1 mouse_genomes_project 9 111985429 111989594 - MGP_WSBEiJ_P0093541 Rtp3 protein_coding protein_coding MGP_WSBEiJ_T0090648.1 MGP_WSBEiJ_G0033832.1 mouse_genomes_project 9 42715728 42751118 + MGP_WSBEiJ_P0090648 Ddx6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009156.1 MGP_WSBEiJ_G0007364.1 mouse_genomes_project 9 94760816 94762420 - Gm29395 lincRNA lincRNA MGP_WSBEiJ_T0090630.1 MGP_WSBEiJ_G0033823.1 mouse_genomes_project 9 42470492 42484203 + MGP_WSBEiJ_P0090630 Hyou1 protein_coding protein_coding MGP_WSBEiJ_T0090631.1 MGP_WSBEiJ_G0033823.1 mouse_genomes_project 9 42470548 42482530 + MGP_WSBEiJ_P0090631 Hyou1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090632.1 MGP_WSBEiJ_G0033823.1 mouse_genomes_project 9 42470559 42481743 + Hyou1 protein_coding retained_intron MGP_WSBEiJ_T0090633.1 MGP_WSBEiJ_G0033823.1 mouse_genomes_project 9 42470575 42484197 + MGP_WSBEiJ_P0090633 Hyou1 protein_coding protein_coding MGP_WSBEiJ_T0090634.1 MGP_WSBEiJ_G0033823.1 mouse_genomes_project 9 42470586 42477073 + Hyou1 protein_coding retained_intron MGP_WSBEiJ_T0090635.1 MGP_WSBEiJ_G0033823.1 mouse_genomes_project 9 42470625 42482109 + MGP_WSBEiJ_P0090635 Hyou1 protein_coding protein_coding MGP_WSBEiJ_T0090636.1 MGP_WSBEiJ_G0033823.1 mouse_genomes_project 9 42471531 42475151 + MGP_WSBEiJ_P0090636 Hyou1 protein_coding protein_coding MGP_WSBEiJ_T0090637.1 MGP_WSBEiJ_G0033823.1 mouse_genomes_project 9 42481667 42482319 + Hyou1 protein_coding retained_intron MGP_WSBEiJ_T0097480.1 MGP_WSBEiJ_G0036148.1 mouse_genomes_project 9 100887346 100887767 - Gm28586 sense_intronic sense_intronic MGP_WSBEiJ_T0091019.1 MGP_WSBEiJ_G0033948.1 mouse_genomes_project 9 53374593 53423143 + MGP_WSBEiJ_P0091019 Ireb2 protein_coding protein_coding MGP_WSBEiJ_T0091519.1 MGP_WSBEiJ_G0034091.1 mouse_genomes_project 9 65232765 65353561 + MGP_WSBEiJ_P0091519 Dapk2 protein_coding protein_coding MGP_WSBEiJ_T0091520.1 MGP_WSBEiJ_G0034091.1 mouse_genomes_project 9 65232777 65299167 + Dapk2 protein_coding retained_intron MGP_WSBEiJ_T0091521.1 MGP_WSBEiJ_G0034091.1 mouse_genomes_project 9 65297833 65350275 + MGP_WSBEiJ_P0091521 Dapk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091522.1 MGP_WSBEiJ_G0034091.1 mouse_genomes_project 9 65349710 65353034 + Dapk2 protein_coding retained_intron MGP_WSBEiJ_T0009165.1 MGP_WSBEiJ_G0007372.1 mouse_genomes_project 9 100353424 100365796 + 4930519F24Rik lincRNA lincRNA MGP_WSBEiJ_T0099897.1 MGP_WSBEiJ_G0038560.1 mouse_genomes_project 9 121733997 121734146 + Snora62 snoRNA snoRNA MGP_WSBEiJ_T0099860.1 MGP_WSBEiJ_G0038523.1 mouse_genomes_project 9 63133585 63133656 + Gm22455 snoRNA snoRNA MGP_WSBEiJ_T0005437.1 MGP_WSBEiJ_G0004586.1 mouse_genomes_project 9 103957780 103978528 + Gm16252 antisense antisense MGP_WSBEiJ_T0015516.1 MGP_WSBEiJ_G0013646.1 mouse_genomes_project 9 31574568 31575130 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010882.1 MGP_WSBEiJ_G0009039.1 mouse_genomes_project 9 51872272 51872354 - Mir130c miRNA miRNA MGP_WSBEiJ_T0089757.1 MGP_WSBEiJ_G0033462.1 mouse_genomes_project 9 5726282 5797863 + MGP_WSBEiJ_P0089757 Pgr protein_coding protein_coding MGP_WSBEiJ_T0089758.1 MGP_WSBEiJ_G0033462.1 mouse_genomes_project 9 5726868 5776809 + Pgr protein_coding retained_intron MGP_WSBEiJ_T0089759.1 MGP_WSBEiJ_G0033462.1 mouse_genomes_project 9 5726917 5794679 + MGP_WSBEiJ_P0089759 Pgr protein_coding protein_coding MGP_WSBEiJ_T0090030.1 MGP_WSBEiJ_G0033571.1 mouse_genomes_project 9 18319291 18329859 + MGP_WSBEiJ_P0090030 Qtrt1 protein_coding protein_coding MGP_WSBEiJ_T0091284.1 MGP_WSBEiJ_G0034026.1 mouse_genomes_project 9 58733541 59281492 - MGP_WSBEiJ_P0091284 Thsd4 protein_coding protein_coding MGP_WSBEiJ_T0091285.1 MGP_WSBEiJ_G0034026.1 mouse_genomes_project 9 58733541 59295734 - MGP_WSBEiJ_P0091285 Thsd4 protein_coding protein_coding MGP_WSBEiJ_T0091286.1 MGP_WSBEiJ_G0034026.1 mouse_genomes_project 9 58736327 58904872 - MGP_WSBEiJ_P0091286 Thsd4 protein_coding protein_coding MGP_WSBEiJ_T0091287.1 MGP_WSBEiJ_G0034026.1 mouse_genomes_project 9 58760732 58769294 - Thsd4 protein_coding retained_intron MGP_WSBEiJ_T0091288.1 MGP_WSBEiJ_G0034026.1 mouse_genomes_project 9 59209206 59307405 - MGP_WSBEiJ_P0091288 Thsd4 protein_coding protein_coding MGP_WSBEiJ_T0091289.1 MGP_WSBEiJ_G0034026.1 mouse_genomes_project 9 59294576 59295706 - Thsd4 protein_coding processed_transcript MGP_WSBEiJ_T0097474.1 MGP_WSBEiJ_G0036143.1 mouse_genomes_project 9 25376680 25378038 + Gm15606 sense_intronic sense_intronic MGP_WSBEiJ_T0097475.1 MGP_WSBEiJ_G0036143.1 mouse_genomes_project 9 25376733 25378315 + Gm15606 sense_intronic sense_intronic MGP_WSBEiJ_T0005475.1 MGP_WSBEiJ_G0004617.1 mouse_genomes_project 9 116508105 116509561 - Gm26962 antisense antisense MGP_WSBEiJ_T0093554.1 MGP_WSBEiJ_G0034480.1 mouse_genomes_project 9 112058046 112060831 - MGP_WSBEiJ_P0093554 Ccrl2 protein_coding protein_coding MGP_WSBEiJ_T0093555.1 MGP_WSBEiJ_G0034480.1 mouse_genomes_project 9 112058392 112061080 - MGP_WSBEiJ_P0093555 Ccrl2 protein_coding protein_coding MGP_WSBEiJ_T0093556.1 MGP_WSBEiJ_G0034480.1 mouse_genomes_project 9 112059590 112060807 - MGP_WSBEiJ_P0093556 Ccrl2 protein_coding protein_coding MGP_WSBEiJ_T0089996.1 MGP_WSBEiJ_G0033559.1 mouse_genomes_project 9 17963273 17980986 - MGP_WSBEiJ_P0089996 Raver1 protein_coding protein_coding MGP_WSBEiJ_T0017988.1 MGP_WSBEiJ_G0015181.1 mouse_genomes_project 9 115631122 115638366 + processed_transcript processed_transcript MGP_WSBEiJ_T0017989.1 MGP_WSBEiJ_G0015181.1 mouse_genomes_project 9 115631150 115637583 + processed_transcript processed_transcript MGP_WSBEiJ_T0091128.1 MGP_WSBEiJ_G0033977.1 mouse_genomes_project 9 55711929 55717265 - MGP_WSBEiJ_P0091128 Neil1 protein_coding protein_coding MGP_WSBEiJ_T0091129.1 MGP_WSBEiJ_G0033977.1 mouse_genomes_project 9 55712199 55717443 - MGP_WSBEiJ_P0091129 Neil1 protein_coding protein_coding MGP_WSBEiJ_T0091130.1 MGP_WSBEiJ_G0033977.1 mouse_genomes_project 9 55712385 55716172 - MGP_WSBEiJ_P0091130 Neil1 protein_coding protein_coding MGP_WSBEiJ_T0009115.1 MGP_WSBEiJ_G0007332.1 mouse_genomes_project 9 69432627 69461164 - Gm26849 lincRNA lincRNA MGP_WSBEiJ_T0092711.1 MGP_WSBEiJ_G0034346.1 mouse_genomes_project 9 107090285 107094106 + MGP_WSBEiJ_P0092711 Abhd14b protein_coding protein_coding MGP_WSBEiJ_T0092712.1 MGP_WSBEiJ_G0034346.1 mouse_genomes_project 9 107090289 107094131 + MGP_WSBEiJ_P0092712 Abhd14b protein_coding protein_coding MGP_WSBEiJ_T0092713.1 MGP_WSBEiJ_G0034346.1 mouse_genomes_project 9 107090702 107094629 + MGP_WSBEiJ_P0092713 Abhd14b protein_coding protein_coding MGP_WSBEiJ_T0092714.1 MGP_WSBEiJ_G0034346.1 mouse_genomes_project 9 107091133 107095480 + MGP_WSBEiJ_P0092714 Abhd14b protein_coding protein_coding MGP_WSBEiJ_T0092715.1 MGP_WSBEiJ_G0034346.1 mouse_genomes_project 9 107091168 107094597 + MGP_WSBEiJ_P0092715 Abhd14b protein_coding protein_coding MGP_WSBEiJ_T0092716.1 MGP_WSBEiJ_G0034346.1 mouse_genomes_project 9 107091207 107094569 + MGP_WSBEiJ_P0092716 Abhd14b protein_coding protein_coding MGP_WSBEiJ_T0090525.1 MGP_WSBEiJ_G0033786.1 mouse_genomes_project 9 38556496 38556898 + MGP_WSBEiJ_P0090525 Gm21915 protein_coding protein_coding MGP_WSBEiJ_T0089860.1 MGP_WSBEiJ_G0033492.1 mouse_genomes_project 9 12322335 12364666 + MGP_WSBEiJ_P0089860 Smco4 protein_coding protein_coding MGP_WSBEiJ_T0089861.1 MGP_WSBEiJ_G0033492.1 mouse_genomes_project 9 12338574 12364663 + MGP_WSBEiJ_P0089861 Smco4 protein_coding protein_coding MGP_WSBEiJ_T0093045.1 MGP_WSBEiJ_G0034397.1 mouse_genomes_project 9 108755408 108758962 + MGP_WSBEiJ_P0093045 Gmppb protein_coding protein_coding MGP_WSBEiJ_T0093046.1 MGP_WSBEiJ_G0034397.1 mouse_genomes_project 9 108755435 108755748 + Gmppb protein_coding processed_transcript MGP_WSBEiJ_T0093047.1 MGP_WSBEiJ_G0034397.1 mouse_genomes_project 9 108755455 108758077 + Gmppb protein_coding retained_intron MGP_WSBEiJ_T0093048.1 MGP_WSBEiJ_G0034397.1 mouse_genomes_project 9 108755491 108757863 + MGP_WSBEiJ_P0093048 Gmppb protein_coding protein_coding MGP_WSBEiJ_T0093049.1 MGP_WSBEiJ_G0034397.1 mouse_genomes_project 9 108755621 108757686 + Gmppb protein_coding retained_intron MGP_WSBEiJ_T0093758.1 MGP_WSBEiJ_G0034531.1 mouse_genomes_project 9 121181426 121296464 - MGP_WSBEiJ_P0093758 Scn10a protein_coding protein_coding MGP_WSBEiJ_T0010905.1 MGP_WSBEiJ_G0009062.1 mouse_genomes_project 9 107897383 107897471 - Gm22238 miRNA miRNA MGP_WSBEiJ_T0090424.1 MGP_WSBEiJ_G0033715.1 mouse_genomes_project 9 36018740 36020849 + MGP_WSBEiJ_P0090424 Olfr147 protein_coding protein_coding MGP_WSBEiJ_T0092511.1 MGP_WSBEiJ_G0034310.1 mouse_genomes_project 9 103661621 103704516 - MGP_WSBEiJ_P0092511 Gm20425 protein_coding protein_coding MGP_WSBEiJ_T0099830.1 MGP_WSBEiJ_G0038493.1 mouse_genomes_project 9 12125047 12125149 + snoRNA snoRNA MGP_WSBEiJ_T0090434.1 MGP_WSBEiJ_G0033725.1 mouse_genomes_project 9 36235207 36236158 + MGP_WSBEiJ_P0090434 Olfr914 protein_coding protein_coding MGP_WSBEiJ_T0091095.1 MGP_WSBEiJ_G0033974.1 mouse_genomes_project 9 55552466 55625896 + MGP_WSBEiJ_P0091095 Ptpn9 protein_coding protein_coding MGP_WSBEiJ_T0092054.1 MGP_WSBEiJ_G0034209.1 mouse_genomes_project 9 85759070 85763731 + MGP_WSBEiJ_P0092054 Tpbg protein_coding protein_coding MGP_WSBEiJ_T0092055.1 MGP_WSBEiJ_G0034209.1 mouse_genomes_project 9 85759554 85763731 + MGP_WSBEiJ_P0092055 Tpbg protein_coding protein_coding MGP_WSBEiJ_T0092056.1 MGP_WSBEiJ_G0034209.1 mouse_genomes_project 9 85760063 85760628 + Tpbg protein_coding processed_transcript MGP_WSBEiJ_T0091891.1 MGP_WSBEiJ_G0034170.1 mouse_genomes_project 9 77363284 77403793 + MGP_WSBEiJ_P0091891 Gclc protein_coding protein_coding MGP_WSBEiJ_T0089884.1 MGP_WSBEiJ_G0033501.1 mouse_genomes_project 9 15253879 15256512 + MGP_WSBEiJ_P0089884 Gm5612 protein_coding protein_coding MGP_WSBEiJ_T0015635.1 MGP_WSBEiJ_G0013765.1 mouse_genomes_project 9 109060210 109060574 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092620.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105968175 106100304 - MGP_WSBEiJ_P0092620 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092621.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105968175 106038007 - MGP_WSBEiJ_P0092621 Atp2c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092622.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105968182 106072240 - MGP_WSBEiJ_P0092622 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092623.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105973968 106072917 - MGP_WSBEiJ_P0092623 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092624.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105974348 106072956 - MGP_WSBEiJ_P0092624 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092625.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105974349 106100414 - MGP_WSBEiJ_P0092625 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092626.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105975914 106014094 - Atp2c1 protein_coding processed_transcript MGP_WSBEiJ_T0092627.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105977710 105980896 - Atp2c1 protein_coding retained_intron MGP_WSBEiJ_T0092628.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105982712 106010233 - Atp2c1 protein_coding retained_intron MGP_WSBEiJ_T0092629.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 105986413 106072900 - MGP_WSBEiJ_P0092629 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092630.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106012674 106022193 - Atp2c1 protein_coding retained_intron MGP_WSBEiJ_T0092631.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106024894 106072282 - Atp2c1 protein_coding processed_transcript MGP_WSBEiJ_T0092632.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106030658 106048236 - MGP_WSBEiJ_P0092632 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092633.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106031628 106072870 - MGP_WSBEiJ_P0092633 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092634.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106032293 106073318 - Atp2c1 protein_coding retained_intron MGP_WSBEiJ_T0092635.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106032349 106072433 - MGP_WSBEiJ_P0092635 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092636.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106036630 106106473 - Atp2c1 protein_coding processed_transcript MGP_WSBEiJ_T0092637.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106036630 106073306 - MGP_WSBEiJ_P0092637 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092638.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106037993 106072928 - MGP_WSBEiJ_P0092638 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092639.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106042556 106072487 - MGP_WSBEiJ_P0092639 Atp2c1 protein_coding protein_coding MGP_WSBEiJ_T0092640.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106046951 106072928 - Atp2c1 protein_coding retained_intron MGP_WSBEiJ_T0092641.1 MGP_WSBEiJ_G0034330.1 mouse_genomes_project 9 106099159 106100570 - Atp2c1 protein_coding retained_intron MGP_WSBEiJ_T0092209.1 MGP_WSBEiJ_G0034242.1 mouse_genomes_project 9 92324848 92347591 + MGP_WSBEiJ_P0092209 Plscr1 protein_coding protein_coding MGP_WSBEiJ_T0092210.1 MGP_WSBEiJ_G0034242.1 mouse_genomes_project 9 92341440 92347252 + Plscr1 protein_coding retained_intron MGP_WSBEiJ_T0009178.1 MGP_WSBEiJ_G0007384.1 mouse_genomes_project 9 108025690 108026470 - 4930429P21Rik lincRNA lincRNA MGP_WSBEiJ_T0009179.1 MGP_WSBEiJ_G0007384.1 mouse_genomes_project 9 108026205 108028425 - 4930429P21Rik lincRNA lincRNA MGP_WSBEiJ_T0090074.1 MGP_WSBEiJ_G0033584.1 mouse_genomes_project 9 18858770 18869482 - MGP_WSBEiJ_P0090074 Rab3d protein_coding protein_coding MGP_WSBEiJ_T0090075.1 MGP_WSBEiJ_G0033584.1 mouse_genomes_project 9 18858789 18869429 - MGP_WSBEiJ_P0090075 Rab3d protein_coding protein_coding MGP_WSBEiJ_T0090076.1 MGP_WSBEiJ_G0033584.1 mouse_genomes_project 9 18859928 18869407 - MGP_WSBEiJ_P0090076 Rab3d protein_coding protein_coding MGP_WSBEiJ_T0090077.1 MGP_WSBEiJ_G0033584.1 mouse_genomes_project 9 18866175 18869379 - MGP_WSBEiJ_P0090077 Rab3d protein_coding protein_coding MGP_WSBEiJ_T0090078.1 MGP_WSBEiJ_G0033584.1 mouse_genomes_project 9 18866898 18869411 - Rab3d protein_coding retained_intron MGP_WSBEiJ_T0093639.1 MGP_WSBEiJ_G0034492.1 mouse_genomes_project 9 115123652 115188427 - MGP_WSBEiJ_P0093639 Fbxl2 protein_coding protein_coding MGP_WSBEiJ_T0093640.1 MGP_WSBEiJ_G0034492.1 mouse_genomes_project 9 115137958 115188459 - MGP_WSBEiJ_P0093640 Fbxl2 protein_coding protein_coding MGP_WSBEiJ_T0093641.1 MGP_WSBEiJ_G0034492.1 mouse_genomes_project 9 115139262 115188424 - MGP_WSBEiJ_P0093641 Fbxl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093642.1 MGP_WSBEiJ_G0034492.1 mouse_genomes_project 9 115144565 115155249 - Fbxl2 protein_coding retained_intron MGP_WSBEiJ_T0093643.1 MGP_WSBEiJ_G0034492.1 mouse_genomes_project 9 115152178 115188472 - Fbxl2 protein_coding retained_intron MGP_WSBEiJ_T0093644.1 MGP_WSBEiJ_G0034492.1 mouse_genomes_project 9 115166839 115209199 - Fbxl2 protein_coding processed_transcript MGP_WSBEiJ_T0090253.1 MGP_WSBEiJ_G0033648.1 mouse_genomes_project 9 32515229 32568197 - MGP_WSBEiJ_P0090253 Dcps protein_coding protein_coding MGP_WSBEiJ_T0090254.1 MGP_WSBEiJ_G0033648.1 mouse_genomes_project 9 32515233 32568195 - MGP_WSBEiJ_P0090254 Dcps protein_coding protein_coding MGP_WSBEiJ_T0090255.1 MGP_WSBEiJ_G0033648.1 mouse_genomes_project 9 32517128 32568129 - MGP_WSBEiJ_P0090255 Dcps protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092364.1 MGP_WSBEiJ_G0034277.1 mouse_genomes_project 9 99227973 99229214 + MGP_WSBEiJ_P0092364 Foxl2 protein_coding protein_coding MGP_WSBEiJ_T0097225.1 MGP_WSBEiJ_G0035906.1 mouse_genomes_project 9 63257287 63257422 + Gm24289 scaRNA scaRNA MGP_WSBEiJ_T0089823.1 MGP_WSBEiJ_G0033482.1 mouse_genomes_project 9 11561705 11615953 + MGP_WSBEiJ_P0089823 Mre11a protein_coding protein_coding MGP_WSBEiJ_T0089824.1 MGP_WSBEiJ_G0033482.1 mouse_genomes_project 9 11561727 11618425 + MGP_WSBEiJ_P0089824 Mre11a protein_coding protein_coding MGP_WSBEiJ_T0089825.1 MGP_WSBEiJ_G0033482.1 mouse_genomes_project 9 11561753 11576633 + MGP_WSBEiJ_P0089825 Mre11a protein_coding protein_coding MGP_WSBEiJ_T0089826.1 MGP_WSBEiJ_G0033482.1 mouse_genomes_project 9 11574179 11591465 + MGP_WSBEiJ_P0089826 Mre11a protein_coding protein_coding MGP_WSBEiJ_T0089827.1 MGP_WSBEiJ_G0033482.1 mouse_genomes_project 9 11574192 11581022 + MGP_WSBEiJ_P0089827 Mre11a protein_coding protein_coding MGP_WSBEiJ_T0089841.1 MGP_WSBEiJ_G0033488.1 mouse_genomes_project 9 12067438 12086982 - MGP_WSBEiJ_P0089841 Med17 protein_coding protein_coding MGP_WSBEiJ_T0010902.1 MGP_WSBEiJ_G0009059.1 mouse_genomes_project 9 105545264 105545368 + Gm23391 miRNA miRNA MGP_WSBEiJ_T0099891.1 MGP_WSBEiJ_G0038554.1 mouse_genomes_project 9 111055422 111055548 - Gm23377 snoRNA snoRNA MGP_WSBEiJ_T0011552.1 MGP_WSBEiJ_G0009709.1 mouse_genomes_project 9 122890267 122890513 + Gm22987 misc_RNA misc_RNA MGP_WSBEiJ_T0090989.1 MGP_WSBEiJ_G0033937.1 mouse_genomes_project 9 52512071 52557472 - MGP_WSBEiJ_P0090989 Tnfaip8l3 protein_coding protein_coding MGP_WSBEiJ_T0093355.1 MGP_WSBEiJ_G0034446.1 mouse_genomes_project 9 110240459 110242971 - protein_coding retained_intron MGP_WSBEiJ_T0002413.1 MGP_WSBEiJ_G0002329.1 mouse_genomes_project 9 108910768 108911498 - TEC TEC MGP_WSBEiJ_T0093654.1 MGP_WSBEiJ_G0034502.1 mouse_genomes_project 9 116024543 116047714 + MGP_WSBEiJ_P0093654 Cmtm6 protein_coding protein_coding MGP_WSBEiJ_T0089920.1 MGP_WSBEiJ_G0033534.1 mouse_genomes_project 9 17166056 17167118 + MGP_WSBEiJ_P0089920 Olfr873 protein_coding protein_coding MGP_WSBEiJ_T0090832.1 MGP_WSBEiJ_G0033887.1 mouse_genomes_project 9 47439376 47444293 + Tmprss5 protein_coding retained_intron MGP_WSBEiJ_T0090833.1 MGP_WSBEiJ_G0033887.1 mouse_genomes_project 9 47439376 47455169 + MGP_WSBEiJ_P0090833 Tmprss5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090834.1 MGP_WSBEiJ_G0033887.1 mouse_genomes_project 9 47439469 47454575 + MGP_WSBEiJ_P0090834 Tmprss5 protein_coding protein_coding MGP_WSBEiJ_T0090835.1 MGP_WSBEiJ_G0033887.1 mouse_genomes_project 9 47439469 47455177 + MGP_WSBEiJ_P0090835 Tmprss5 protein_coding protein_coding MGP_WSBEiJ_T0090836.1 MGP_WSBEiJ_G0033887.1 mouse_genomes_project 9 47446586 47455169 + MGP_WSBEiJ_P0090836 Tmprss5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092733.1 MGP_WSBEiJ_G0034348.1 mouse_genomes_project 9 107106328 107108306 - MGP_WSBEiJ_P0092733 Gpr62 protein_coding protein_coding MGP_WSBEiJ_T0090550.1 MGP_WSBEiJ_G0033795.1 mouse_genomes_project 9 40307653 40321752 - Tecta protein_coding processed_transcript MGP_WSBEiJ_T0090551.1 MGP_WSBEiJ_G0033795.1 mouse_genomes_project 9 40307656 40379343 - MGP_WSBEiJ_P0090551 Tecta protein_coding protein_coding MGP_WSBEiJ_T0090552.1 MGP_WSBEiJ_G0033795.1 mouse_genomes_project 9 40307729 40379141 - MGP_WSBEiJ_P0090552 Tecta protein_coding protein_coding MGP_WSBEiJ_T0089921.1 MGP_WSBEiJ_G0033535.1 mouse_genomes_project 9 17179821 17197600 - MGP_WSBEiJ_P0089921 Olfr18 protein_coding protein_coding MGP_WSBEiJ_T0015557.1 MGP_WSBEiJ_G0013687.1 mouse_genomes_project 9 74607527 74608750 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089900.1 MGP_WSBEiJ_G0033514.1 mouse_genomes_project 9 15986456 15987411 + MGP_WSBEiJ_P0089900 Olfr836 protein_coding protein_coding MGP_WSBEiJ_T0015578.1 MGP_WSBEiJ_G0013708.1 mouse_genomes_project 9 84980549 84980994 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093650.1 MGP_WSBEiJ_G0034498.1 mouse_genomes_project 9 115777652 115837699 - MGP_WSBEiJ_P0093650 Trim71 protein_coding protein_coding MGP_WSBEiJ_T0098628.1 MGP_WSBEiJ_G0037291.1 mouse_genomes_project 9 90295591 90295762 + Gm22717 snRNA snRNA MGP_WSBEiJ_T0015563.1 MGP_WSBEiJ_G0013693.1 mouse_genomes_project 9 76566485 76566723 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009063.1 MGP_WSBEiJ_G0007290.1 mouse_genomes_project 9 19048147 19064732 + Gm16845 lincRNA lincRNA MGP_WSBEiJ_T0017961.1 MGP_WSBEiJ_G0015171.1 mouse_genomes_project 9 95769454 95770749 - Gm16127 processed_transcript processed_transcript MGP_WSBEiJ_T0090491.1 MGP_WSBEiJ_G0033770.1 mouse_genomes_project 9 37757323 37758403 + MGP_WSBEiJ_P0090491 Olfr974 protein_coding protein_coding MGP_WSBEiJ_T0091242.1 MGP_WSBEiJ_G0034016.1 mouse_genomes_project 9 58102819 58210276 - MGP_WSBEiJ_P0091242 Arih1 protein_coding protein_coding MGP_WSBEiJ_T0091243.1 MGP_WSBEiJ_G0034016.1 mouse_genomes_project 9 58107662 58210280 - MGP_WSBEiJ_P0091243 Arih1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091244.1 MGP_WSBEiJ_G0034016.1 mouse_genomes_project 9 58107843 58210009 - MGP_WSBEiJ_P0091244 Arih1 protein_coding protein_coding MGP_WSBEiJ_T0091245.1 MGP_WSBEiJ_G0034016.1 mouse_genomes_project 9 58109424 58121642 - MGP_WSBEiJ_P0091245 Arih1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091246.1 MGP_WSBEiJ_G0034016.1 mouse_genomes_project 9 58109509 58125247 - Arih1 protein_coding retained_intron MGP_WSBEiJ_T0091247.1 MGP_WSBEiJ_G0034016.1 mouse_genomes_project 9 58144831 58209718 - Arih1 protein_coding retained_intron MGP_WSBEiJ_T0091248.1 MGP_WSBEiJ_G0034016.1 mouse_genomes_project 9 58159522 58209745 - Arih1 protein_coding retained_intron MGP_WSBEiJ_T0092658.1 MGP_WSBEiJ_G0034334.1 mouse_genomes_project 9 106600364 106609176 - Col6a4 protein_coding processed_transcript MGP_WSBEiJ_T0092659.1 MGP_WSBEiJ_G0034334.1 mouse_genomes_project 9 106601380 106718031 - MGP_WSBEiJ_P0092659 Col6a4 protein_coding protein_coding MGP_WSBEiJ_T0092660.1 MGP_WSBEiJ_G0034334.1 mouse_genomes_project 9 106691015 106692404 - Col6a4 protein_coding processed_transcript MGP_WSBEiJ_T0090782.1 MGP_WSBEiJ_G0033867.1 mouse_genomes_project 9 44435011 44437317 - MGP_WSBEiJ_P0090782 Apoc3 protein_coding protein_coding MGP_WSBEiJ_T0090783.1 MGP_WSBEiJ_G0033867.1 mouse_genomes_project 9 44435129 44437356 - MGP_WSBEiJ_P0090783 Apoc3 protein_coding protein_coding MGP_WSBEiJ_T0090784.1 MGP_WSBEiJ_G0033867.1 mouse_genomes_project 9 44435276 44437693 - MGP_WSBEiJ_P0090784 Apoc3 protein_coding protein_coding MGP_WSBEiJ_T0090785.1 MGP_WSBEiJ_G0033867.1 mouse_genomes_project 9 44436493 44437526 - MGP_WSBEiJ_P0090785 Apoc3 protein_coding protein_coding MGP_WSBEiJ_T0093651.1 MGP_WSBEiJ_G0034499.1 mouse_genomes_project 9 115786184 115786912 + MGP_WSBEiJ_P0093651 protein_coding protein_coding MGP_WSBEiJ_T0089678.1 MGP_WSBEiJ_G0033433.1 mouse_genomes_project 9 233973 610665 + MGP_WSBEiJ_P0089678 Gucy1a2 protein_coding protein_coding MGP_WSBEiJ_T0090318.1 MGP_WSBEiJ_G0033670.1 mouse_genomes_project 9 34046961 34054922 - MGP_WSBEiJ_P0090318 Gm5615 protein_coding protein_coding MGP_WSBEiJ_T0009157.1 MGP_WSBEiJ_G0007365.1 mouse_genomes_project 9 96616942 96619298 - BC043934 lincRNA lincRNA MGP_WSBEiJ_T0009158.1 MGP_WSBEiJ_G0007365.1 mouse_genomes_project 9 96616943 96618594 - BC043934 lincRNA lincRNA MGP_WSBEiJ_T0015536.1 MGP_WSBEiJ_G0013666.1 mouse_genomes_project 9 58519507 58519994 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093792.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122596673 122620188 + MGP_WSBEiJ_P0093792 Ctnnb1 protein_coding protein_coding MGP_WSBEiJ_T0093793.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122600835 122630081 + MGP_WSBEiJ_P0093793 Ctnnb1 protein_coding protein_coding MGP_WSBEiJ_T0093794.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122600910 122630080 + MGP_WSBEiJ_P0093794 Ctnnb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093795.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122600921 122626022 + Ctnnb1 protein_coding retained_intron MGP_WSBEiJ_T0093796.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122601014 122630080 + MGP_WSBEiJ_P0093796 Ctnnb1 protein_coding protein_coding MGP_WSBEiJ_T0093797.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122601059 122621263 + MGP_WSBEiJ_P0093797 Ctnnb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093798.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122601254 122620846 + MGP_WSBEiJ_P0093798 Ctnnb1 protein_coding protein_coding MGP_WSBEiJ_T0093799.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122619773 122629091 + MGP_WSBEiJ_P0093799 Ctnnb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093800.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122620641 122624974 + MGP_WSBEiJ_P0093800 Ctnnb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093801.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122624699 122625416 + Ctnnb1 protein_coding processed_transcript MGP_WSBEiJ_T0093802.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122624871 122627213 + Ctnnb1 protein_coding processed_transcript MGP_WSBEiJ_T0093803.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122625031 122627108 + MGP_WSBEiJ_P0093803 Ctnnb1 protein_coding protein_coding MGP_WSBEiJ_T0093804.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122625488 122628599 + MGP_WSBEiJ_P0093804 Ctnnb1 protein_coding protein_coding MGP_WSBEiJ_T0093805.1 MGP_WSBEiJ_G0034548.1 mouse_genomes_project 9 122626440 122627398 + Ctnnb1 protein_coding retained_intron MGP_WSBEiJ_T0093943.1 MGP_WSBEiJ_G0034593.1 mouse_genomes_project 9 125580010 125585288 + MGP_WSBEiJ_P0093943 Cxcr6 protein_coding protein_coding MGP_WSBEiJ_T0091250.1 MGP_WSBEiJ_G0034018.1 mouse_genomes_project 9 58267337 58294242 + MGP_WSBEiJ_P0091250 Hexa protein_coding protein_coding MGP_WSBEiJ_T0011532.1 MGP_WSBEiJ_G0009689.1 mouse_genomes_project 9 15409485 15409791 + Gm25295 misc_RNA misc_RNA MGP_WSBEiJ_T0010867.1 MGP_WSBEiJ_G0009024.1 mouse_genomes_project 9 36715412 36715496 + Gm25032 miRNA miRNA MGP_WSBEiJ_T0093518.1 MGP_WSBEiJ_G0034470.1 mouse_genomes_project 9 111818468 111825152 + MGP_WSBEiJ_P0093518 Prss45 protein_coding protein_coding MGP_WSBEiJ_T0093519.1 MGP_WSBEiJ_G0034470.1 mouse_genomes_project 9 111818468 111825149 + MGP_WSBEiJ_P0093519 Prss45 protein_coding protein_coding MGP_WSBEiJ_T0091151.1 MGP_WSBEiJ_G0033993.1 mouse_genomes_project 9 56311970 56318223 + MGP_WSBEiJ_P0091151 Cyp1a1 protein_coding protein_coding MGP_WSBEiJ_T0090490.1 MGP_WSBEiJ_G0033769.1 mouse_genomes_project 9 37728039 37728963 + MGP_WSBEiJ_P0090490 Olfr229 protein_coding protein_coding MGP_WSBEiJ_T0093035.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108705182 108754964 + MGP_WSBEiJ_P0093035 Ip6k1 protein_coding protein_coding MGP_WSBEiJ_T0093036.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108705310 108751046 + MGP_WSBEiJ_P0093036 Ip6k1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093037.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108705315 108751902 + Ip6k1 protein_coding processed_transcript MGP_WSBEiJ_T0093038.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108705324 108752300 + Ip6k1 protein_coding retained_intron MGP_WSBEiJ_T0093039.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108705327 108737937 + MGP_WSBEiJ_P0093039 Ip6k1 protein_coding protein_coding MGP_WSBEiJ_T0093040.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108705352 108746055 + MGP_WSBEiJ_P0093040 Ip6k1 protein_coding protein_coding MGP_WSBEiJ_T0093041.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108727700 108751798 + MGP_WSBEiJ_P0093041 Ip6k1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093042.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108727732 108736318 + Ip6k1 protein_coding processed_transcript MGP_WSBEiJ_T0093043.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108736286 108752334 + MGP_WSBEiJ_P0093043 Ip6k1 protein_coding protein_coding MGP_WSBEiJ_T0093044.1 MGP_WSBEiJ_G0034396.1 mouse_genomes_project 9 108751061 108751730 + MGP_WSBEiJ_P0093044 Ip6k1 protein_coding protein_coding MGP_WSBEiJ_T0015620.1 MGP_WSBEiJ_G0013750.1 mouse_genomes_project 9 101738821 101739074 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090957.1 MGP_WSBEiJ_G0033925.1 mouse_genomes_project 9 51766363 51846919 + MGP_WSBEiJ_P0090957 Exph5 protein_coding protein_coding MGP_WSBEiJ_T0090958.1 MGP_WSBEiJ_G0033925.1 mouse_genomes_project 9 51810402 51838356 + Exph5 protein_coding retained_intron MGP_WSBEiJ_T0090959.1 MGP_WSBEiJ_G0033925.1 mouse_genomes_project 9 51810507 51824960 + Exph5 protein_coding retained_intron MGP_WSBEiJ_T0002325.1 MGP_WSBEiJ_G0002242.1 mouse_genomes_project 9 71389792 71392466 - TEC TEC MGP_WSBEiJ_T0098642.1 MGP_WSBEiJ_G0037305.1 mouse_genomes_project 9 112081607 112081670 + Gm26409 snRNA snRNA MGP_WSBEiJ_T0090671.1 MGP_WSBEiJ_G0033835.1 mouse_genomes_project 9 42869266 42894740 - MGP_WSBEiJ_P0090671 Arcn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090672.1 MGP_WSBEiJ_G0033835.1 mouse_genomes_project 9 42882315 42894866 - Arcn1 protein_coding retained_intron MGP_WSBEiJ_T0090673.1 MGP_WSBEiJ_G0033835.1 mouse_genomes_project 9 42883222 42887098 - Arcn1 protein_coding processed_transcript MGP_WSBEiJ_T0090357.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34404689 34606026 - MGP_WSBEiJ_P0090357 Pknox2 protein_coding protein_coding MGP_WSBEiJ_T0090358.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34404689 34675397 - MGP_WSBEiJ_P0090358 Pknox2 protein_coding protein_coding MGP_WSBEiJ_T0090359.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34404692 34675422 - MGP_WSBEiJ_P0090359 Pknox2 protein_coding protein_coding MGP_WSBEiJ_T0090360.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34406185 34488267 - MGP_WSBEiJ_P0090360 Pknox2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090361.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34406349 34605996 - Pknox2 protein_coding processed_transcript MGP_WSBEiJ_T0090362.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34438244 34605996 - Pknox2 protein_coding retained_intron MGP_WSBEiJ_T0090363.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34451814 34605996 - Pknox2 protein_coding retained_intron MGP_WSBEiJ_T0090364.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34453586 34605996 - MGP_WSBEiJ_P0090364 Pknox2 protein_coding protein_coding MGP_WSBEiJ_T0090365.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34453599 34663996 - MGP_WSBEiJ_P0090365 Pknox2 protein_coding protein_coding MGP_WSBEiJ_T0090366.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34471957 34673758 - MGP_WSBEiJ_P0090366 Pknox2 protein_coding protein_coding MGP_WSBEiJ_T0090367.1 MGP_WSBEiJ_G0033678.1 mouse_genomes_project 9 34507976 34675374 - Pknox2 protein_coding processed_transcript MGP_WSBEiJ_T0091259.1 MGP_WSBEiJ_G0034022.1 mouse_genomes_project 9 58427697 58464634 + MGP_WSBEiJ_P0091259 Gramd2 protein_coding protein_coding MGP_WSBEiJ_T0091260.1 MGP_WSBEiJ_G0034022.1 mouse_genomes_project 9 58458347 58469274 + MGP_WSBEiJ_P0091260 Gramd2 protein_coding protein_coding MGP_WSBEiJ_T0091261.1 MGP_WSBEiJ_G0034022.1 mouse_genomes_project 9 58458474 58467135 + MGP_WSBEiJ_P0091261 Gramd2 protein_coding protein_coding MGP_WSBEiJ_T0091262.1 MGP_WSBEiJ_G0034022.1 mouse_genomes_project 9 58460867 58464552 + Gramd2 protein_coding retained_intron MGP_WSBEiJ_T0091263.1 MGP_WSBEiJ_G0034022.1 mouse_genomes_project 9 58461891 58467025 + MGP_WSBEiJ_P0091263 Gramd2 protein_coding protein_coding MGP_WSBEiJ_T0091264.1 MGP_WSBEiJ_G0034022.1 mouse_genomes_project 9 58464826 58469274 + Gramd2 protein_coding retained_intron MGP_WSBEiJ_T0097134.1 MGP_WSBEiJ_G0035815.1 mouse_genomes_project 9 112651745 112651863 - n-R5s90 rRNA rRNA MGP_WSBEiJ_T0097120.1 MGP_WSBEiJ_G0035801.1 mouse_genomes_project 9 32364714 32364844 + Gm23702 rRNA rRNA MGP_WSBEiJ_T0090394.1 MGP_WSBEiJ_G0033690.1 mouse_genomes_project 9 35175335 35210376 + MGP_WSBEiJ_P0090394 Siae protein_coding protein_coding MGP_WSBEiJ_T0093759.1 MGP_WSBEiJ_G0034532.1 mouse_genomes_project 9 121336643 121418013 - MGP_WSBEiJ_P0093759 Scn11a protein_coding protein_coding MGP_WSBEiJ_T0093382.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110853004 111016063 + MGP_WSBEiJ_P0093382 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093383.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110853344 110934830 + MGP_WSBEiJ_P0093383 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093384.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110853408 111016055 + MGP_WSBEiJ_P0093384 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093385.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110897639 110932372 + Map4 protein_coding processed_transcript MGP_WSBEiJ_T0093386.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110968173 111004875 + MGP_WSBEiJ_P0093386 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093387.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110983401 111016054 + MGP_WSBEiJ_P0093387 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093388.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110983405 111015281 + MGP_WSBEiJ_P0093388 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093389.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110983423 111016061 + MGP_WSBEiJ_P0093389 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093390.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110993715 111000921 + Map4 protein_coding processed_transcript MGP_WSBEiJ_T0093391.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110999752 111014195 + MGP_WSBEiJ_P0093391 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093392.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 110999752 111014605 + MGP_WSBEiJ_P0093392 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093393.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 111000992 111013903 + MGP_WSBEiJ_P0093393 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093394.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 111001016 111014022 + MGP_WSBEiJ_P0093394 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093395.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 111009714 111012142 + Map4 protein_coding retained_intron MGP_WSBEiJ_T0093396.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 111010163 111014258 + MGP_WSBEiJ_P0093396 Map4 protein_coding protein_coding MGP_WSBEiJ_T0093397.1 MGP_WSBEiJ_G0034451.1 mouse_genomes_project 9 111011906 111014605 + MGP_WSBEiJ_P0093397 Map4 protein_coding protein_coding MGP_WSBEiJ_T0091144.1 MGP_WSBEiJ_G0033987.1 mouse_genomes_project 9 56162940 56194150 + MGP_WSBEiJ_P0091144 Scamp2 protein_coding protein_coding MGP_WSBEiJ_T0093941.1 MGP_WSBEiJ_G0034592.1 mouse_genomes_project 9 125561491 125626212 - MGP_WSBEiJ_P0093941 Fyco1 protein_coding protein_coding MGP_WSBEiJ_T0093942.1 MGP_WSBEiJ_G0034592.1 mouse_genomes_project 9 125561867 125625879 - MGP_WSBEiJ_P0093942 Fyco1 protein_coding protein_coding MGP_WSBEiJ_T0093944.1 MGP_WSBEiJ_G0034592.1 mouse_genomes_project 9 125603584 125626194 - MGP_WSBEiJ_P0093944 Fyco1 protein_coding protein_coding MGP_WSBEiJ_T0093945.1 MGP_WSBEiJ_G0034592.1 mouse_genomes_project 9 125611617 125626199 - Fyco1 protein_coding retained_intron MGP_WSBEiJ_T0090426.1 MGP_WSBEiJ_G0033717.1 mouse_genomes_project 9 36072368 36073424 + MGP_WSBEiJ_P0090426 Olfr902 protein_coding protein_coding MGP_WSBEiJ_T0089840.1 MGP_WSBEiJ_G0033487.1 mouse_genomes_project 9 12045130 12066480 + MGP_WSBEiJ_P0089840 Vstm5 protein_coding protein_coding MGP_WSBEiJ_T0002347.1 MGP_WSBEiJ_G0002264.1 mouse_genomes_project 9 76943606 76944157 + TEC TEC MGP_WSBEiJ_T0090438.1 MGP_WSBEiJ_G0033729.1 mouse_genomes_project 9 36342840 36367660 + MGP_WSBEiJ_P0090438 Vwa5a protein_coding protein_coding MGP_WSBEiJ_T0090439.1 MGP_WSBEiJ_G0033729.1 mouse_genomes_project 9 36342844 36367085 + MGP_WSBEiJ_P0090439 Vwa5a protein_coding protein_coding MGP_WSBEiJ_T0090440.1 MGP_WSBEiJ_G0033729.1 mouse_genomes_project 9 36343634 36347223 + MGP_WSBEiJ_P0090440 Vwa5a protein_coding protein_coding MGP_WSBEiJ_T0090441.1 MGP_WSBEiJ_G0033729.1 mouse_genomes_project 9 36352837 36359001 + Vwa5a protein_coding retained_intron MGP_WSBEiJ_T0090442.1 MGP_WSBEiJ_G0033729.1 mouse_genomes_project 9 36358792 36360429 + Vwa5a protein_coding retained_intron MGP_WSBEiJ_T0090443.1 MGP_WSBEiJ_G0033729.1 mouse_genomes_project 9 36360269 36362273 + Vwa5a protein_coding retained_intron MGP_WSBEiJ_T0090444.1 MGP_WSBEiJ_G0033729.1 mouse_genomes_project 9 36360467 36366244 + MGP_WSBEiJ_P0090444 Vwa5a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096867.1 MGP_WSBEiJ_G0035548.1 mouse_genomes_project 9 35790665 35791592 + pseudogene pseudogene MGP_WSBEiJ_T0092428.1 MGP_WSBEiJ_G0034293.1 mouse_genomes_project 9 100909445 100928275 - MGP_WSBEiJ_P0092428 Slc35g2 protein_coding protein_coding MGP_WSBEiJ_T0092429.1 MGP_WSBEiJ_G0034293.1 mouse_genomes_project 9 100909447 100910173 - Slc35g2 protein_coding processed_transcript MGP_WSBEiJ_T0099827.1 MGP_WSBEiJ_G0038490.1 mouse_genomes_project 9 12123891 12124028 + Gm25791 snoRNA snoRNA MGP_WSBEiJ_T0089804.1 MGP_WSBEiJ_G0033474.1 mouse_genomes_project 9 11115188 11143413 - MGP_WSBEiJ_P0089804 Endod1 protein_coding protein_coding MGP_WSBEiJ_T0090173.1 MGP_WSBEiJ_G0033625.1 mouse_genomes_project 9 24139252 24205005 + MGP_WSBEiJ_P0090173 Ncapd3 protein_coding protein_coding MGP_WSBEiJ_T0015533.1 MGP_WSBEiJ_G0013663.1 mouse_genomes_project 9 57387009 57387177 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089831.1 MGP_WSBEiJ_G0033484.1 mouse_genomes_project 9 11673703 11693538 - MGP_WSBEiJ_P0089831 Izumo1r protein_coding protein_coding MGP_WSBEiJ_T0089832.1 MGP_WSBEiJ_G0033484.1 mouse_genomes_project 9 11682715 11693603 - MGP_WSBEiJ_P0089832 Izumo1r protein_coding protein_coding MGP_WSBEiJ_T0089833.1 MGP_WSBEiJ_G0033484.1 mouse_genomes_project 9 11689668 11693586 - MGP_WSBEiJ_P0089833 Izumo1r protein_coding protein_coding MGP_WSBEiJ_T0089834.1 MGP_WSBEiJ_G0033484.1 mouse_genomes_project 9 11689673 11693410 - MGP_WSBEiJ_P0089834 Izumo1r protein_coding protein_coding MGP_WSBEiJ_T0089835.1 MGP_WSBEiJ_G0033484.1 mouse_genomes_project 9 11690415 11693408 - MGP_WSBEiJ_P0089835 Izumo1r protein_coding protein_coding MGP_WSBEiJ_T0093848.1 MGP_WSBEiJ_G0034559.1 mouse_genomes_project 9 123480606 123489445 - MGP_WSBEiJ_P0093848 Hhatl protein_coding unknown_likely_coding MGP_WSBEiJ_T0093849.1 MGP_WSBEiJ_G0034559.1 mouse_genomes_project 9 123480609 123489457 - MGP_WSBEiJ_P0093849 Hhatl protein_coding protein_coding MGP_WSBEiJ_T0093850.1 MGP_WSBEiJ_G0034559.1 mouse_genomes_project 9 123480615 123487985 - MGP_WSBEiJ_P0093850 Hhatl protein_coding protein_coding MGP_WSBEiJ_T0009185.1 MGP_WSBEiJ_G0007389.1 mouse_genomes_project 9 110566367 110573595 - lincRNA lincRNA MGP_WSBEiJ_T0009186.1 MGP_WSBEiJ_G0007389.1 mouse_genomes_project 9 110566373 110574230 - lincRNA lincRNA MGP_WSBEiJ_T0009187.1 MGP_WSBEiJ_G0007389.1 mouse_genomes_project 9 110566373 110574172 - lincRNA lincRNA MGP_WSBEiJ_T0002321.1 MGP_WSBEiJ_G0002238.1 mouse_genomes_project 9 71294233 71296227 - TEC TEC MGP_WSBEiJ_T0090317.1 MGP_WSBEiJ_G0033669.1 mouse_genomes_project 9 33989080 33990655 + MGP_WSBEiJ_P0090317 Gm9513 protein_coding protein_coding MGP_WSBEiJ_T0089899.1 MGP_WSBEiJ_G0033513.1 mouse_genomes_project 9 15904642 15905578 + MGP_WSBEiJ_P0089899 Olfr835 protein_coding protein_coding MGP_WSBEiJ_T0091036.1 MGP_WSBEiJ_G0033954.1 mouse_genomes_project 9 53546634 53566821 - MGP_WSBEiJ_P0091036 Chrnb4 protein_coding protein_coding MGP_WSBEiJ_T0015614.1 MGP_WSBEiJ_G0013744.1 mouse_genomes_project 9 99518718 99519238 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0089867.1 MGP_WSBEiJ_G0033494.1 mouse_genomes_project 9 12535338 12569018 + MGP_WSBEiJ_P0089867 Slc36a4 protein_coding protein_coding MGP_WSBEiJ_T0093817.1 MGP_WSBEiJ_G0034551.1 mouse_genomes_project 9 123162857 123168610 - MGP_WSBEiJ_P0093817 Cck protein_coding protein_coding MGP_WSBEiJ_T0090611.1 MGP_WSBEiJ_G0033814.1 mouse_genomes_project 9 42328971 42333096 - MGP_WSBEiJ_P0090611 Pdzd3 protein_coding protein_coding MGP_WSBEiJ_T0010873.1 MGP_WSBEiJ_G0009030.1 mouse_genomes_project 9 42428350 42428491 - Gm44335 miRNA miRNA MGP_WSBEiJ_T0091040.1 MGP_WSBEiJ_G0033956.1 mouse_genomes_project 9 53722681 53737345 + MGP_WSBEiJ_P0091040 Fbxo22 protein_coding protein_coding MGP_WSBEiJ_T0091041.1 MGP_WSBEiJ_G0033956.1 mouse_genomes_project 9 53722718 53740692 + MGP_WSBEiJ_P0091041 Fbxo22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091042.1 MGP_WSBEiJ_G0033956.1 mouse_genomes_project 9 53722720 53740685 + MGP_WSBEiJ_P0091042 Fbxo22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091043.1 MGP_WSBEiJ_G0033956.1 mouse_genomes_project 9 53727374 53734717 + MGP_WSBEiJ_P0091043 Fbxo22 protein_coding protein_coding MGP_WSBEiJ_T0091024.1 MGP_WSBEiJ_G0033950.1 mouse_genomes_project 9 53462215 53462963 - MGP_WSBEiJ_P0091024 AY074887 protein_coding protein_coding MGP_WSBEiJ_T0005464.1 MGP_WSBEiJ_G0004606.1 mouse_genomes_project 9 108700771 108705086 - 4930535L15Rik antisense antisense MGP_WSBEiJ_T0015597.1 MGP_WSBEiJ_G0013727.1 mouse_genomes_project 9 92747875 92748703 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0092838.1 MGP_WSBEiJ_G0034370.1 mouse_genomes_project 9 108225951 108229431 + MGP_WSBEiJ_P0092838 Nprl2 protein_coding protein_coding MGP_WSBEiJ_T0092839.1 MGP_WSBEiJ_G0034370.1 mouse_genomes_project 9 108225966 108228359 + MGP_WSBEiJ_P0092839 Nprl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092840.1 MGP_WSBEiJ_G0034370.1 mouse_genomes_project 9 108225970 108229420 + Nprl2 protein_coding retained_intron MGP_WSBEiJ_T0092841.1 MGP_WSBEiJ_G0034370.1 mouse_genomes_project 9 108225986 108227413 + Nprl2 protein_coding retained_intron MGP_WSBEiJ_T0092842.1 MGP_WSBEiJ_G0034370.1 mouse_genomes_project 9 108227701 108228185 + Nprl2 protein_coding retained_intron MGP_WSBEiJ_T0090774.1 MGP_WSBEiJ_G0033865.1 mouse_genomes_project 9 44208078 44426268 + MGP_WSBEiJ_P0090774 Sik3 protein_coding protein_coding MGP_WSBEiJ_T0090775.1 MGP_WSBEiJ_G0033865.1 mouse_genomes_project 9 44208122 44424349 + MGP_WSBEiJ_P0090775 Sik3 protein_coding protein_coding MGP_WSBEiJ_T0090776.1 MGP_WSBEiJ_G0033865.1 mouse_genomes_project 9 44208258 44423308 + MGP_WSBEiJ_P0090776 Sik3 protein_coding protein_coding MGP_WSBEiJ_T0090777.1 MGP_WSBEiJ_G0033865.1 mouse_genomes_project 9 44208290 44403772 + MGP_WSBEiJ_P0090777 Sik3 protein_coding protein_coding MGP_WSBEiJ_T0090778.1 MGP_WSBEiJ_G0033865.1 mouse_genomes_project 9 44354942 44426262 + Sik3 protein_coding processed_transcript MGP_WSBEiJ_T0090779.1 MGP_WSBEiJ_G0033865.1 mouse_genomes_project 9 44421644 44423308 + MGP_WSBEiJ_P0090779 Sik3 protein_coding protein_coding MGP_WSBEiJ_T0091523.1 MGP_WSBEiJ_G0034092.1 mouse_genomes_project 9 65438899 65463489 + Herc1 protein_coding retained_intron MGP_WSBEiJ_T0091524.1 MGP_WSBEiJ_G0034092.1 mouse_genomes_project 9 65438922 65604500 + MGP_WSBEiJ_P0091524 Herc1 protein_coding protein_coding MGP_WSBEiJ_T0091525.1 MGP_WSBEiJ_G0034092.1 mouse_genomes_project 9 65532557 65543419 + Herc1 protein_coding retained_intron MGP_WSBEiJ_T0091526.1 MGP_WSBEiJ_G0034092.1 mouse_genomes_project 9 65542245 65556150 + MGP_WSBEiJ_P0091526 Herc1 protein_coding protein_coding MGP_WSBEiJ_T0091527.1 MGP_WSBEiJ_G0034092.1 mouse_genomes_project 9 65560027 65569666 + Herc1 protein_coding retained_intron MGP_WSBEiJ_T0091528.1 MGP_WSBEiJ_G0034092.1 mouse_genomes_project 9 65589361 65594410 + Herc1 protein_coding retained_intron MGP_WSBEiJ_T0091529.1 MGP_WSBEiJ_G0034092.1 mouse_genomes_project 9 65594144 65602471 + Herc1 protein_coding retained_intron MGP_WSBEiJ_T0090564.1 MGP_WSBEiJ_G0033799.1 mouse_genomes_project 9 41123278 41131039 - MGP_WSBEiJ_P0090564 Tmem136 protein_coding protein_coding MGP_WSBEiJ_T0002391.1 MGP_WSBEiJ_G0002307.1 mouse_genomes_project 9 101584008 101586703 - TEC TEC MGP_WSBEiJ_T0091455.1 MGP_WSBEiJ_G0034074.1 mouse_genomes_project 9 64426601 64442984 + MGP_WSBEiJ_P0091455 Rasl12 protein_coding protein_coding MGP_WSBEiJ_T0091456.1 MGP_WSBEiJ_G0034074.1 mouse_genomes_project 9 64426601 64440803 + MGP_WSBEiJ_P0091456 Rasl12 protein_coding protein_coding MGP_WSBEiJ_T0092214.1 MGP_WSBEiJ_G0034244.1 mouse_genomes_project 9 92387570 92404362 + 1700057G04Rik protein_coding processed_transcript MGP_WSBEiJ_T0092215.1 MGP_WSBEiJ_G0034244.1 mouse_genomes_project 9 92387570 92421249 + MGP_WSBEiJ_P0092215 1700057G04Rik protein_coding protein_coding MGP_WSBEiJ_T0092216.1 MGP_WSBEiJ_G0034244.1 mouse_genomes_project 9 92387570 92436109 + MGP_WSBEiJ_P0092216 1700057G04Rik protein_coding protein_coding MGP_WSBEiJ_T0092217.1 MGP_WSBEiJ_G0034244.1 mouse_genomes_project 9 92387601 92429305 + 1700057G04Rik protein_coding processed_transcript MGP_WSBEiJ_T0092218.1 MGP_WSBEiJ_G0034244.1 mouse_genomes_project 9 92421070 92436052 + MGP_WSBEiJ_P0092218 1700057G04Rik protein_coding protein_coding MGP_WSBEiJ_T0092219.1 MGP_WSBEiJ_G0034244.1 mouse_genomes_project 9 92429318 92436109 + MGP_WSBEiJ_P0092219 1700057G04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002350.1 MGP_WSBEiJ_G0002267.1 mouse_genomes_project 9 83263996 83266614 + TEC TEC MGP_WSBEiJ_T0091797.1 MGP_WSBEiJ_G0034146.1 mouse_genomes_project 9 73558697 73591375 + Wdr72 protein_coding processed_transcript MGP_WSBEiJ_T0091798.1 MGP_WSBEiJ_G0034146.1 mouse_genomes_project 9 73558697 73740524 + MGP_WSBEiJ_P0091798 Wdr72 protein_coding protein_coding MGP_WSBEiJ_T0091799.1 MGP_WSBEiJ_G0034146.1 mouse_genomes_project 9 73558745 73561832 + Wdr72 protein_coding processed_transcript MGP_WSBEiJ_T0091800.1 MGP_WSBEiJ_G0034146.1 mouse_genomes_project 9 73582410 73739044 + MGP_WSBEiJ_P0091800 Wdr72 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091801.1 MGP_WSBEiJ_G0034146.1 mouse_genomes_project 9 73731493 73740629 + Wdr72 protein_coding processed_transcript MGP_WSBEiJ_T0009073.1 MGP_WSBEiJ_G0007300.1 mouse_genomes_project 9 31975737 31976516 - Gm26662 lincRNA lincRNA MGP_WSBEiJ_T0089799.1 MGP_WSBEiJ_G0033472.1 mouse_genomes_project 9 10555013 10576535 + MGP_WSBEiJ_P0089799 Fam76b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089800.1 MGP_WSBEiJ_G0033472.1 mouse_genomes_project 9 10555013 10576535 + MGP_WSBEiJ_P0089800 Fam76b protein_coding protein_coding MGP_WSBEiJ_T0089801.1 MGP_WSBEiJ_G0033472.1 mouse_genomes_project 9 10555032 10559542 + Fam76b protein_coding retained_intron MGP_WSBEiJ_T0089802.1 MGP_WSBEiJ_G0033472.1 mouse_genomes_project 9 10564989 10568414 + Fam76b protein_coding retained_intron MGP_WSBEiJ_T0093590.1 MGP_WSBEiJ_G0034486.1 mouse_genomes_project 9 112594337 112732601 - MGP_WSBEiJ_P0093590 Stac protein_coding protein_coding MGP_WSBEiJ_T0093591.1 MGP_WSBEiJ_G0034486.1 mouse_genomes_project 9 112594337 112732478 - MGP_WSBEiJ_P0093591 Stac protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093592.1 MGP_WSBEiJ_G0034486.1 mouse_genomes_project 9 112674164 112732582 - Stac protein_coding processed_transcript MGP_WSBEiJ_T0093847.1 MGP_WSBEiJ_G0034558.1 mouse_genomes_project 9 123474148 123480413 + MGP_WSBEiJ_P0093847 Klhl40 protein_coding protein_coding MGP_WSBEiJ_T0089989.1 MGP_WSBEiJ_G0033552.1 mouse_genomes_project 9 17844544 17855197 - MGP_WSBEiJ_P0089989 S1pr2 protein_coding protein_coding MGP_WSBEiJ_T0092880.1 MGP_WSBEiJ_G0034377.1 mouse_genomes_project 9 108264381 108270420 + MGP_WSBEiJ_P0092880 Hyal3 protein_coding protein_coding MGP_WSBEiJ_T0092881.1 MGP_WSBEiJ_G0034377.1 mouse_genomes_project 9 108264856 108271839 + MGP_WSBEiJ_P0092881 Hyal3 protein_coding protein_coding MGP_WSBEiJ_T0092882.1 MGP_WSBEiJ_G0034377.1 mouse_genomes_project 9 108268324 108270249 + MGP_WSBEiJ_P0092882 Hyal3 protein_coding protein_coding MGP_WSBEiJ_T0090773.1 MGP_WSBEiJ_G0033864.1 mouse_genomes_project 9 44156810 44177544 - MGP_WSBEiJ_P0090773 Pafah1b2 protein_coding protein_coding MGP_WSBEiJ_T0090852.1 MGP_WSBEiJ_G0033896.1 mouse_genomes_project 9 48906557 48926902 - MGP_WSBEiJ_P0090852 Bco2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0015641.1 MGP_WSBEiJ_G0013771.1 mouse_genomes_project 9 118496705 118497067 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098592.1 MGP_WSBEiJ_G0037255.1 mouse_genomes_project 9 41969485 41969590 - Gm23326 snRNA snRNA MGP_WSBEiJ_T0099831.1 MGP_WSBEiJ_G0038494.1 mouse_genomes_project 9 12125236 12126811 + snoRNA snoRNA MGP_WSBEiJ_T0010922.1 MGP_WSBEiJ_G0009079.1 mouse_genomes_project 9 123998883 123999022 - Mir8106 miRNA miRNA MGP_WSBEiJ_T0009167.1 MGP_WSBEiJ_G0007374.1 mouse_genomes_project 9 100803862 100805443 + Gm28166 lincRNA lincRNA MGP_WSBEiJ_T0092048.1 MGP_WSBEiJ_G0034208.1 mouse_genomes_project 9 85593554 85660575 - MGP_WSBEiJ_P0092048 Ibtk protein_coding protein_coding MGP_WSBEiJ_T0092049.1 MGP_WSBEiJ_G0034208.1 mouse_genomes_project 9 85593748 85660575 - MGP_WSBEiJ_P0092049 Ibtk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092050.1 MGP_WSBEiJ_G0034208.1 mouse_genomes_project 9 85593762 85631004 - Ibtk protein_coding retained_intron MGP_WSBEiJ_T0092051.1 MGP_WSBEiJ_G0034208.1 mouse_genomes_project 9 85617634 85628719 - Ibtk protein_coding retained_intron MGP_WSBEiJ_T0092052.1 MGP_WSBEiJ_G0034208.1 mouse_genomes_project 9 85630363 85660555 - Ibtk protein_coding retained_intron MGP_WSBEiJ_T0092053.1 MGP_WSBEiJ_G0034208.1 mouse_genomes_project 9 85638471 85641616 - Ibtk protein_coding retained_intron MGP_WSBEiJ_T0090170.1 MGP_WSBEiJ_G0033623.1 mouse_genomes_project 9 24107246 24115953 + MGP_WSBEiJ_P0090170 Thyn1 protein_coding protein_coding MGP_WSBEiJ_T0090171.1 MGP_WSBEiJ_G0033623.1 mouse_genomes_project 9 24107583 24115827 + MGP_WSBEiJ_P0090171 Thyn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0092360.1 MGP_WSBEiJ_G0034273.1 mouse_genomes_project 9 99125522 99128169 + MGP_WSBEiJ_P0092360 protein_coding protein_coding MGP_WSBEiJ_T0005453.1 MGP_WSBEiJ_G0004598.1 mouse_genomes_project 9 108100648 108107357 - Gm17141 antisense antisense MGP_WSBEiJ_T0089808.1 MGP_WSBEiJ_G0033477.1 mouse_genomes_project 9 11305886 11377251 - MGP_WSBEiJ_P0089808 Amotl1 protein_coding protein_coding MGP_WSBEiJ_T0089809.1 MGP_WSBEiJ_G0033477.1 mouse_genomes_project 9 11318063 11321448 - Amotl1 protein_coding retained_intron MGP_WSBEiJ_T0089810.1 MGP_WSBEiJ_G0033477.1 mouse_genomes_project 9 11356224 11377952 - MGP_WSBEiJ_P0089810 Amotl1 protein_coding protein_coding MGP_WSBEiJ_T0089811.1 MGP_WSBEiJ_G0033477.1 mouse_genomes_project 9 11356258 11377055 - MGP_WSBEiJ_P0089811 Amotl1 protein_coding protein_coding MGP_WSBEiJ_T0002349.1 MGP_WSBEiJ_G0002266.1 mouse_genomes_project 9 82921113 82923918 + TEC TEC MGP_WSBEiJ_T0090690.1 MGP_WSBEiJ_G0033839.1 mouse_genomes_project 9 42932080 43013059 - MGP_WSBEiJ_P0090690 Kmt2a protein_coding unknown_likely_coding MGP_WSBEiJ_T0090691.1 MGP_WSBEiJ_G0033839.1 mouse_genomes_project 9 42932081 43013059 - MGP_WSBEiJ_P0090691 Kmt2a protein_coding protein_coding MGP_WSBEiJ_T0090692.1 MGP_WSBEiJ_G0033839.1 mouse_genomes_project 9 42932081 43013081 - MGP_WSBEiJ_P0090692 Kmt2a protein_coding protein_coding MGP_WSBEiJ_T0090693.1 MGP_WSBEiJ_G0033839.1 mouse_genomes_project 9 42943395 42948831 - MGP_WSBEiJ_P0090693 Kmt2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090694.1 MGP_WSBEiJ_G0033839.1 mouse_genomes_project 9 42951450 42977576 - MGP_WSBEiJ_P0090694 Kmt2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090695.1 MGP_WSBEiJ_G0033839.1 mouse_genomes_project 9 42970955 43013081 - MGP_WSBEiJ_P0090695 Kmt2a protein_coding protein_coding MGP_WSBEiJ_T0092771.1 MGP_WSBEiJ_G0034358.1 mouse_genomes_project 9 107347672 107456380 - MGP_WSBEiJ_P0092771 Rad54l2 protein_coding protein_coding MGP_WSBEiJ_T0092772.1 MGP_WSBEiJ_G0034358.1 mouse_genomes_project 9 107348379 107352867 - MGP_WSBEiJ_P0092772 Rad54l2 protein_coding protein_coding MGP_WSBEiJ_T0092773.1 MGP_WSBEiJ_G0034358.1 mouse_genomes_project 9 107383044 107383978 - MGP_WSBEiJ_P0092773 Rad54l2 protein_coding protein_coding MGP_WSBEiJ_T0092774.1 MGP_WSBEiJ_G0034358.1 mouse_genomes_project 9 107453953 107456362 - Rad54l2 protein_coding retained_intron MGP_WSBEiJ_T0098604.1 MGP_WSBEiJ_G0037267.1 mouse_genomes_project 9 62045080 62045187 + Gm25064 snRNA snRNA MGP_WSBEiJ_T0002351.1 MGP_WSBEiJ_G0002268.1 mouse_genomes_project 9 85230591 85232432 - TEC TEC MGP_WSBEiJ_T0090900.1 MGP_WSBEiJ_G0033909.1 mouse_genomes_project 9 49151235 49155667 + Fdxacb1 protein_coding retained_intron MGP_WSBEiJ_T0090901.1 MGP_WSBEiJ_G0033909.1 mouse_genomes_project 9 49151248 49154589 + MGP_WSBEiJ_P0090901 Fdxacb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090902.1 MGP_WSBEiJ_G0033909.1 mouse_genomes_project 9 49151252 49156352 + MGP_WSBEiJ_P0090902 Fdxacb1 protein_coding protein_coding MGP_WSBEiJ_T0090904.1 MGP_WSBEiJ_G0033909.1 mouse_genomes_project 9 49153059 49154535 + MGP_WSBEiJ_P0090904 Fdxacb1 protein_coding protein_coding MGP_WSBEiJ_T0093631.1 MGP_WSBEiJ_G0034489.1 mouse_genomes_project 9 114883307 114932939 + MGP_WSBEiJ_P0093631 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0093911.1 MGP_WSBEiJ_G0034582.1 mouse_genomes_project 9 124917100 124924298 + MGP_WSBEiJ_P0093911 Clec3b protein_coding protein_coding MGP_WSBEiJ_T0015631.1 MGP_WSBEiJ_G0013761.1 mouse_genomes_project 9 106745054 106745727 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002329.1 MGP_WSBEiJ_G0002246.1 mouse_genomes_project 9 71762064 71764818 + TEC TEC MGP_WSBEiJ_T0009204.1 MGP_WSBEiJ_G0007403.1 mouse_genomes_project 9 124034514 124040561 - lincRNA lincRNA MGP_WSBEiJ_T0091897.1 MGP_WSBEiJ_G0034173.1 mouse_genomes_project 9 77716089 77743860 - MGP_WSBEiJ_P0091897 Fbxo9 protein_coding protein_coding MGP_WSBEiJ_T0091898.1 MGP_WSBEiJ_G0034173.1 mouse_genomes_project 9 77716092 77744269 - MGP_WSBEiJ_P0091898 Fbxo9 protein_coding protein_coding MGP_WSBEiJ_T0091899.1 MGP_WSBEiJ_G0034173.1 mouse_genomes_project 9 77716431 77719158 - Fbxo9 protein_coding retained_intron MGP_WSBEiJ_T0091900.1 MGP_WSBEiJ_G0034173.1 mouse_genomes_project 9 77720124 77722113 - Fbxo9 protein_coding retained_intron MGP_WSBEiJ_T0091901.1 MGP_WSBEiJ_G0034173.1 mouse_genomes_project 9 77729975 77743808 - MGP_WSBEiJ_P0091901 Fbxo9 protein_coding protein_coding MGP_WSBEiJ_T0091902.1 MGP_WSBEiJ_G0034173.1 mouse_genomes_project 9 77735006 77743791 - MGP_WSBEiJ_P0091902 Fbxo9 protein_coding protein_coding MGP_WSBEiJ_T0090144.1 MGP_WSBEiJ_G0033616.1 mouse_genomes_project 9 22320724 22381723 + MGP_WSBEiJ_P0090144 Sept7 protein_coding protein_coding MGP_WSBEiJ_T0090145.1 MGP_WSBEiJ_G0033616.1 mouse_genomes_project 9 22320724 22381723 + MGP_WSBEiJ_P0090145 Sept7 protein_coding protein_coding MGP_WSBEiJ_T0005434.1 MGP_WSBEiJ_G0004583.1 mouse_genomes_project 9 98843619 98844875 + Gm37637 antisense antisense MGP_WSBEiJ_T0092542.1 MGP_WSBEiJ_G0034316.1 mouse_genomes_project 9 103968525 104184916 - MGP_WSBEiJ_P0092542 Tmem108 protein_coding protein_coding MGP_WSBEiJ_T0092543.1 MGP_WSBEiJ_G0034316.1 mouse_genomes_project 9 103969356 104254711 - MGP_WSBEiJ_P0092543 Tmem108 protein_coding protein_coding MGP_WSBEiJ_T0092544.1 MGP_WSBEiJ_G0034316.1 mouse_genomes_project 9 103970014 104254668 - MGP_WSBEiJ_P0092544 Tmem108 protein_coding protein_coding MGP_WSBEiJ_T0092545.1 MGP_WSBEiJ_G0034316.1 mouse_genomes_project 9 103970017 103979217 - Tmem108 protein_coding retained_intron MGP_WSBEiJ_T0092546.1 MGP_WSBEiJ_G0034316.1 mouse_genomes_project 9 104245221 104254664 - Tmem108 protein_coding retained_intron MGP_WSBEiJ_T0093829.1 MGP_WSBEiJ_G0034555.1 mouse_genomes_project 9 123403430 123405969 + MGP_WSBEiJ_P0093829 Deb1 protein_coding protein_coding MGP_WSBEiJ_T0092528.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103775675 103823996 + MGP_WSBEiJ_P0092528 Topbp1 protein_coding protein_coding MGP_WSBEiJ_T0092529.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103775691 103776451 + Topbp1 protein_coding retained_intron MGP_WSBEiJ_T0092530.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103775963 103782003 + MGP_WSBEiJ_P0092530 Topbp1 protein_coding protein_coding MGP_WSBEiJ_T0092531.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103800289 103810820 + Topbp1 protein_coding retained_intron MGP_WSBEiJ_T0092532.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103800315 103802118 + Topbp1 protein_coding retained_intron MGP_WSBEiJ_T0092533.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103806622 103815625 + MGP_WSBEiJ_P0092533 Topbp1 protein_coding protein_coding MGP_WSBEiJ_T0092534.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103817216 103820310 + MGP_WSBEiJ_P0092534 Topbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092535.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103817518 103818267 + Topbp1 protein_coding retained_intron MGP_WSBEiJ_T0092536.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103819187 103820671 + Topbp1 protein_coding retained_intron MGP_WSBEiJ_T0092537.1 MGP_WSBEiJ_G0034313.1 mouse_genomes_project 9 103819808 103823469 + Topbp1 protein_coding retained_intron MGP_WSBEiJ_T0010897.1 MGP_WSBEiJ_G0009054.1 mouse_genomes_project 9 89756171 89756240 - Mir184 miRNA miRNA MGP_WSBEiJ_T0093140.1 MGP_WSBEiJ_G0034415.1 mouse_genomes_project 9 109224912 109225558 + MGP_WSBEiJ_P0093140 Lamb2 protein_coding protein_coding MGP_WSBEiJ_T0093141.1 MGP_WSBEiJ_G0034415.1 mouse_genomes_project 9 109225033 109235712 + MGP_WSBEiJ_P0093141 Lamb2 protein_coding protein_coding MGP_WSBEiJ_T0093142.1 MGP_WSBEiJ_G0034415.1 mouse_genomes_project 9 109225048 109225830 + MGP_WSBEiJ_P0093142 Lamb2 protein_coding protein_coding MGP_WSBEiJ_T0093143.1 MGP_WSBEiJ_G0034415.1 mouse_genomes_project 9 109225054 109225763 + MGP_WSBEiJ_P0093143 Lamb2 protein_coding protein_coding MGP_WSBEiJ_T0093144.1 MGP_WSBEiJ_G0034415.1 mouse_genomes_project 9 109225057 109225361 + Lamb2 protein_coding retained_intron MGP_WSBEiJ_T0093145.1 MGP_WSBEiJ_G0034415.1 mouse_genomes_project 9 109232999 109233853 + Lamb2 protein_coding retained_intron MGP_WSBEiJ_T0093146.1 MGP_WSBEiJ_G0034415.1 mouse_genomes_project 9 109234058 109234714 + Lamb2 protein_coding retained_intron MGP_WSBEiJ_T0017962.1 MGP_WSBEiJ_G0015172.1 mouse_genomes_project 9 96961467 96970191 + C430002N11Rik processed_transcript retained_intron MGP_WSBEiJ_T0017963.1 MGP_WSBEiJ_G0015172.1 mouse_genomes_project 9 96961480 96970986 + C430002N11Rik processed_transcript retained_intron MGP_WSBEiJ_T0017964.1 MGP_WSBEiJ_G0015172.1 mouse_genomes_project 9 96961480 96979096 + C430002N11Rik processed_transcript lincRNA MGP_WSBEiJ_T0017965.1 MGP_WSBEiJ_G0015172.1 mouse_genomes_project 9 96961490 96970203 + C430002N11Rik processed_transcript retained_intron MGP_WSBEiJ_T0017966.1 MGP_WSBEiJ_G0015172.1 mouse_genomes_project 9 96961506 96969882 + C430002N11Rik processed_transcript lincRNA MGP_WSBEiJ_T0002334.1 MGP_WSBEiJ_G0002251.1 mouse_genomes_project 9 72117052 72117262 + TEC TEC MGP_WSBEiJ_T0091133.1 MGP_WSBEiJ_G0033980.1 mouse_genomes_project 9 55837341 55847655 - MGP_WSBEiJ_P0091133 1700017B05Rik protein_coding protein_coding MGP_WSBEiJ_T0090311.1 MGP_WSBEiJ_G0033663.1 mouse_genomes_project 9 33182241 33195660 - MGP_WSBEiJ_P0090311 Gm27235 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090974.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52093823 52148538 - MGP_WSBEiJ_P0090974 Cul5 protein_coding protein_coding MGP_WSBEiJ_T0090975.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52093823 52151046 - MGP_WSBEiJ_P0090975 Cul5 protein_coding protein_coding MGP_WSBEiJ_T0090976.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52095824 52101259 - Cul5 protein_coding retained_intron MGP_WSBEiJ_T0090977.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52096248 52148542 - MGP_WSBEiJ_P0090977 Cul5 protein_coding protein_coding MGP_WSBEiJ_T0090978.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52108836 52126341 - Cul5 protein_coding retained_intron MGP_WSBEiJ_T0090979.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52113510 52148518 - Cul5 protein_coding retained_intron MGP_WSBEiJ_T0090980.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52122209 52126437 - Cul5 protein_coding retained_intron MGP_WSBEiJ_T0090981.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52126195 52138779 - Cul5 protein_coding processed_transcript MGP_WSBEiJ_T0090982.1 MGP_WSBEiJ_G0033931.1 mouse_genomes_project 9 52135450 52148103 - MGP_WSBEiJ_P0090982 Cul5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009191.1 MGP_WSBEiJ_G0007393.1 mouse_genomes_project 9 113289283 113289947 + 2310075C17Rik lincRNA lincRNA MGP_WSBEiJ_T0090470.1 MGP_WSBEiJ_G0033755.1 mouse_genomes_project 9 37329472 37330414 - MGP_WSBEiJ_P0090470 Olfr958 protein_coding protein_coding MGP_WSBEiJ_T0089720.1 MGP_WSBEiJ_G0033449.1 mouse_genomes_project 9 4347776 4360286 + MGP_WSBEiJ_P0089720 Mmp10 protein_coding protein_coding MGP_WSBEiJ_T0089896.1 MGP_WSBEiJ_G0033510.1 mouse_genomes_project 9 15800341 15815634 - MGP_WSBEiJ_P0089896 protein_coding protein_coding MGP_WSBEiJ_T0090803.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795397 46121815 + MGP_WSBEiJ_P0090803 Cadm1 protein_coding protein_coding MGP_WSBEiJ_T0090804.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795435 46119036 + MGP_WSBEiJ_P0090804 Cadm1 protein_coding protein_coding MGP_WSBEiJ_T0090805.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795468 46126082 + MGP_WSBEiJ_P0090805 Cadm1 protein_coding protein_coding MGP_WSBEiJ_T0090806.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795481 46119478 + MGP_WSBEiJ_P0090806 Cadm1 protein_coding protein_coding MGP_WSBEiJ_T0090807.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795481 46121810 + MGP_WSBEiJ_P0090807 Cadm1 protein_coding protein_coding MGP_WSBEiJ_T0090808.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795576 46084778 + Cadm1 protein_coding retained_intron MGP_WSBEiJ_T0090809.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795576 46057506 + Cadm1 protein_coding retained_intron MGP_WSBEiJ_T0090810.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795597 46079734 + Cadm1 protein_coding processed_transcript MGP_WSBEiJ_T0090811.1 MGP_WSBEiJ_G0033874.1 mouse_genomes_project 9 45795597 46118839 + MGP_WSBEiJ_P0090811 Cadm1 protein_coding protein_coding MGP_WSBEiJ_T0092600.1 MGP_WSBEiJ_G0034326.1 mouse_genomes_project 9 105681393 105684323 - MGP_WSBEiJ_P0092600 Nudt16 protein_coding protein_coding MGP_WSBEiJ_T0092601.1 MGP_WSBEiJ_G0034326.1 mouse_genomes_project 9 105681823 105684816 - MGP_WSBEiJ_P0092601 Nudt16 protein_coding protein_coding MGP_WSBEiJ_T0092602.1 MGP_WSBEiJ_G0034326.1 mouse_genomes_project 9 105682683 105684791 - Nudt16 protein_coding retained_intron MGP_WSBEiJ_T0092603.1 MGP_WSBEiJ_G0034326.1 mouse_genomes_project 9 105682683 105684791 - Nudt16 protein_coding retained_intron MGP_WSBEiJ_T0092604.1 MGP_WSBEiJ_G0034326.1 mouse_genomes_project 9 105683217 105684784 - MGP_WSBEiJ_P0092604 Nudt16 protein_coding protein_coding MGP_WSBEiJ_T0093702.1 MGP_WSBEiJ_G0034516.1 mouse_genomes_project 9 120111455 120420320 + MGP_WSBEiJ_P0093702 Itga9 protein_coding protein_coding MGP_WSBEiJ_T0093703.1 MGP_WSBEiJ_G0034516.1 mouse_genomes_project 9 120196778 120320760 + Itga9 protein_coding processed_transcript MGP_WSBEiJ_T0093704.1 MGP_WSBEiJ_G0034516.1 mouse_genomes_project 9 120224109 120417027 + MGP_WSBEiJ_P0093704 Itga9 protein_coding protein_coding MGP_WSBEiJ_T0093705.1 MGP_WSBEiJ_G0034516.1 mouse_genomes_project 9 120320812 120360111 + MGP_WSBEiJ_P0093705 Itga9 protein_coding protein_coding MGP_WSBEiJ_T0093706.1 MGP_WSBEiJ_G0034516.1 mouse_genomes_project 9 120355884 120389220 + Itga9 protein_coding processed_transcript MGP_WSBEiJ_T0093707.1 MGP_WSBEiJ_G0034516.1 mouse_genomes_project 9 120389348 120416616 + Itga9 protein_coding processed_transcript MGP_WSBEiJ_T0091928.1 MGP_WSBEiJ_G0034183.1 mouse_genomes_project 9 78091862 78119750 + MGP_WSBEiJ_P0091928 Ddx43 protein_coding protein_coding MGP_WSBEiJ_T0090488.1 MGP_WSBEiJ_G0033767.1 mouse_genomes_project 9 37629414 37630350 + MGP_WSBEiJ_P0090488 protein_coding protein_coding MGP_WSBEiJ_T0099881.1 MGP_WSBEiJ_G0038544.1 mouse_genomes_project 9 100271140 100271274 + Gm23594 snoRNA snoRNA MGP_WSBEiJ_T0011550.1 MGP_WSBEiJ_G0009707.1 mouse_genomes_project 9 119774928 119775235 + Gm22198 misc_RNA misc_RNA MGP_WSBEiJ_T0090378.1 MGP_WSBEiJ_G0033684.1 mouse_genomes_project 9 34959572 34962768 - Robo3 protein_coding retained_intron MGP_WSBEiJ_T0090379.1 MGP_WSBEiJ_G0033684.1 mouse_genomes_project 9 34959948 34966506 - Robo3 protein_coding retained_intron MGP_WSBEiJ_T0090380.1 MGP_WSBEiJ_G0033684.1 mouse_genomes_project 9 34959948 34976820 - MGP_WSBEiJ_P0090380 Robo3 protein_coding protein_coding MGP_WSBEiJ_T0090381.1 MGP_WSBEiJ_G0033684.1 mouse_genomes_project 9 34959948 34973811 - MGP_WSBEiJ_P0090381 Robo3 protein_coding protein_coding MGP_WSBEiJ_T0090382.1 MGP_WSBEiJ_G0033684.1 mouse_genomes_project 9 34960065 34973811 - Robo3 protein_coding retained_intron MGP_WSBEiJ_T0090383.1 MGP_WSBEiJ_G0033684.1 mouse_genomes_project 9 34961307 34962695 - Robo3 protein_coding retained_intron MGP_WSBEiJ_T0093818.1 MGP_WSBEiJ_G0034552.1 mouse_genomes_project 9 123258908 123267645 - MGP_WSBEiJ_P0093818 Lyzl4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093819.1 MGP_WSBEiJ_G0034552.1 mouse_genomes_project 9 123264923 123333620 - MGP_WSBEiJ_P0093819 Lyzl4 protein_coding protein_coding MGP_WSBEiJ_T0099851.1 MGP_WSBEiJ_G0038514.1 mouse_genomes_project 9 42860727 42860862 - Gm24166 snoRNA snoRNA MGP_WSBEiJ_T0093279.1 MGP_WSBEiJ_G0034431.1 mouse_genomes_project 9 109636792 109637737 + MGP_WSBEiJ_P0093279 Tmem89 protein_coding protein_coding MGP_WSBEiJ_T0093280.1 MGP_WSBEiJ_G0034431.1 mouse_genomes_project 9 109636792 109637737 + MGP_WSBEiJ_P0093280 Tmem89 protein_coding protein_coding MGP_WSBEiJ_T0091759.1 MGP_WSBEiJ_G0034138.1 mouse_genomes_project 9 72406874 72412370 - MGP_WSBEiJ_P0091759 Ccpg1os protein_coding protein_coding MGP_WSBEiJ_T0091760.1 MGP_WSBEiJ_G0034138.1 mouse_genomes_project 9 72410563 72412376 - Ccpg1os protein_coding retained_intron MGP_WSBEiJ_T0093398.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016427 111032909 - MGP_WSBEiJ_P0093398 protein_coding protein_coding MGP_WSBEiJ_T0093399.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016427 111051571 - MGP_WSBEiJ_P0093399 protein_coding protein_coding MGP_WSBEiJ_T0093400.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016427 111051174 - MGP_WSBEiJ_P0093400 protein_coding protein_coding MGP_WSBEiJ_T0093401.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016427 111051163 - MGP_WSBEiJ_P0093401 protein_coding protein_coding MGP_WSBEiJ_T0093402.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016428 111042999 - protein_coding retained_intron MGP_WSBEiJ_T0093403.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016428 111017099 - MGP_WSBEiJ_P0093403 protein_coding protein_coding MGP_WSBEiJ_T0093404.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016428 111051178 - MGP_WSBEiJ_P0093404 protein_coding protein_coding MGP_WSBEiJ_T0093405.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016428 111017158 - MGP_WSBEiJ_P0093405 protein_coding protein_coding MGP_WSBEiJ_T0093406.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016428 111048818 - MGP_WSBEiJ_P0093406 protein_coding protein_coding MGP_WSBEiJ_T0093407.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016429 111051152 - MGP_WSBEiJ_P0093407 protein_coding protein_coding MGP_WSBEiJ_T0093408.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016430 111051076 - MGP_WSBEiJ_P0093408 protein_coding protein_coding MGP_WSBEiJ_T0093409.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111016625 111017623 - MGP_WSBEiJ_P0093409 protein_coding protein_coding MGP_WSBEiJ_T0093410.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111018426 111019562 - protein_coding retained_intron MGP_WSBEiJ_T0093411.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111020050 111023575 - protein_coding retained_intron MGP_WSBEiJ_T0093412.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111021908 111044467 - protein_coding retained_intron MGP_WSBEiJ_T0093413.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111025061 111032861 - MGP_WSBEiJ_P0093413 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093414.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111025169 111050525 - MGP_WSBEiJ_P0093414 protein_coding protein_coding MGP_WSBEiJ_T0093415.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111025211 111032860 - MGP_WSBEiJ_P0093415 protein_coding protein_coding MGP_WSBEiJ_T0093416.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111030561 111049047 - MGP_WSBEiJ_P0093416 protein_coding protein_coding MGP_WSBEiJ_T0093417.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111030649 111050828 - MGP_WSBEiJ_P0093417 protein_coding protein_coding MGP_WSBEiJ_T0093418.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111042117 111051160 - MGP_WSBEiJ_P0093418 protein_coding protein_coding MGP_WSBEiJ_T0093419.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111046815 111051172 - protein_coding processed_transcript MGP_WSBEiJ_T0093420.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111047916 111051115 - protein_coding retained_intron MGP_WSBEiJ_T0093421.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111048854 111051373 - protein_coding processed_transcript MGP_WSBEiJ_T0093422.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111049162 111050849 - protein_coding processed_transcript MGP_WSBEiJ_T0093423.1 MGP_WSBEiJ_G0034452.1 mouse_genomes_project 9 111049231 111051126 - protein_coding processed_transcript MGP_WSBEiJ_T0005332.1 MGP_WSBEiJ_G0004518.1 mouse_genomes_project 9 6072948 6100688 + Gm16833 antisense antisense MGP_WSBEiJ_T0005333.1 MGP_WSBEiJ_G0004518.1 mouse_genomes_project 9 6100487 6100688 + Gm16833 antisense antisense MGP_WSBEiJ_T0091550.1 MGP_WSBEiJ_G0034099.1 mouse_genomes_project 9 66061690 66065154 + MGP_WSBEiJ_P0091550 Rps27l protein_coding protein_coding MGP_WSBEiJ_T0091551.1 MGP_WSBEiJ_G0034099.1 mouse_genomes_project 9 66061695 66065156 + MGP_WSBEiJ_P0091551 Rps27l protein_coding protein_coding MGP_WSBEiJ_T0091552.1 MGP_WSBEiJ_G0034099.1 mouse_genomes_project 9 66061770 66065110 + MGP_WSBEiJ_P0091552 Rps27l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091553.1 MGP_WSBEiJ_G0034099.1 mouse_genomes_project 9 66061959 66065158 + Rps27l protein_coding processed_transcript MGP_WSBEiJ_T0091554.1 MGP_WSBEiJ_G0034099.1 mouse_genomes_project 9 66063246 66065110 + MGP_WSBEiJ_P0091554 Rps27l protein_coding protein_coding MGP_WSBEiJ_T0091555.1 MGP_WSBEiJ_G0034099.1 mouse_genomes_project 9 66064204 66065153 + Rps27l protein_coding retained_intron MGP_WSBEiJ_T0090403.1 MGP_WSBEiJ_G0033695.1 mouse_genomes_project 9 35390595 35391643 + MGP_WSBEiJ_P0090403 Olfr876 protein_coding protein_coding MGP_WSBEiJ_T0005403.1 MGP_WSBEiJ_G0004566.1 mouse_genomes_project 9 80042444 80044589 - Gm27227 antisense antisense MGP_WSBEiJ_T0099843.1 MGP_WSBEiJ_G0038506.1 mouse_genomes_project 9 34705733 34705848 - Gm25273 snoRNA snoRNA MGP_WSBEiJ_T0091542.1 MGP_WSBEiJ_G0034095.1 mouse_genomes_project 9 65812605 65867881 + MGP_WSBEiJ_P0091542 Car12 protein_coding protein_coding MGP_WSBEiJ_T0091543.1 MGP_WSBEiJ_G0034095.1 mouse_genomes_project 9 65812646 65855506 + Car12 protein_coding retained_intron MGP_WSBEiJ_T0091544.1 MGP_WSBEiJ_G0034095.1 mouse_genomes_project 9 65812647 65848900 + Car12 protein_coding retained_intron MGP_WSBEiJ_T0091545.1 MGP_WSBEiJ_G0034095.1 mouse_genomes_project 9 65812649 65867878 + MGP_WSBEiJ_P0091545 Car12 protein_coding protein_coding MGP_WSBEiJ_T0091546.1 MGP_WSBEiJ_G0034095.1 mouse_genomes_project 9 65848731 65865353 + MGP_WSBEiJ_P0091546 Car12 protein_coding protein_coding MGP_WSBEiJ_T0002365.1 MGP_WSBEiJ_G0002281.1 mouse_genomes_project 9 91282332 91284810 - TEC TEC MGP_WSBEiJ_T0090638.1 MGP_WSBEiJ_G0033824.1 mouse_genomes_project 9 42488528 42494676 + MGP_WSBEiJ_P0090638 Slc37a4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090639.1 MGP_WSBEiJ_G0033824.1 mouse_genomes_project 9 42489881 42494669 + MGP_WSBEiJ_P0090639 Slc37a4 protein_coding protein_coding MGP_WSBEiJ_T0091301.1 MGP_WSBEiJ_G0034030.1 mouse_genomes_project 9 59609424 59628177 - MGP_WSBEiJ_P0091301 Gm9869 protein_coding protein_coding MGP_WSBEiJ_T0089916.1 MGP_WSBEiJ_G0033530.1 mouse_genomes_project 9 16921902 16922898 - MGP_WSBEiJ_P0089916 Olfr867 protein_coding protein_coding MGP_WSBEiJ_T0090531.1 MGP_WSBEiJ_G0033789.1 mouse_genomes_project 9 38784438 38788327 + MGP_WSBEiJ_P0090531 Bsx protein_coding protein_coding MGP_WSBEiJ_T0093093.1 MGP_WSBEiJ_G0034405.1 mouse_genomes_project 9 109023438 109029160 + Amt protein_coding processed_transcript MGP_WSBEiJ_T0093094.1 MGP_WSBEiJ_G0034405.1 mouse_genomes_project 9 109023455 109029846 + MGP_WSBEiJ_P0093094 Amt protein_coding protein_coding MGP_WSBEiJ_T0093095.1 MGP_WSBEiJ_G0034405.1 mouse_genomes_project 9 109023495 109024117 + Amt protein_coding retained_intron MGP_WSBEiJ_T0093096.1 MGP_WSBEiJ_G0034405.1 mouse_genomes_project 9 109023507 109026033 + Amt protein_coding retained_intron MGP_WSBEiJ_T0015615.1 MGP_WSBEiJ_G0013745.1 mouse_genomes_project 9 100273995 100274821 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010850.1 MGP_WSBEiJ_G0009007.1 mouse_genomes_project 9 5129186 5129282 + Mir1899 miRNA miRNA MGP_WSBEiJ_T0017951.1 MGP_WSBEiJ_G0015167.1 mouse_genomes_project 9 79673472 79673904 + Gm3211 processed_transcript processed_transcript MGP_WSBEiJ_T0090452.1 MGP_WSBEiJ_G0033737.1 mouse_genomes_project 9 36610790 36611860 + MGP_WSBEiJ_P0090452 Olfr933 protein_coding protein_coding MGP_WSBEiJ_T0090415.1 MGP_WSBEiJ_G0033706.1 mouse_genomes_project 9 35779690 35780641 - MGP_WSBEiJ_P0090415 Olfr891 protein_coding protein_coding MGP_WSBEiJ_T0093342.1 MGP_WSBEiJ_G0034442.1 mouse_genomes_project 9 109832175 109857095 + MGP_WSBEiJ_P0093342 Plxnb1 protein_coding protein_coding MGP_WSBEiJ_T0093343.1 MGP_WSBEiJ_G0034442.1 mouse_genomes_project 9 109832738 109837696 + MGP_WSBEiJ_P0093343 Plxnb1 protein_coding protein_coding MGP_WSBEiJ_T0093344.1 MGP_WSBEiJ_G0034442.1 mouse_genomes_project 9 109833496 109837696 + MGP_WSBEiJ_P0093344 Plxnb1 protein_coding protein_coding MGP_WSBEiJ_T0093345.1 MGP_WSBEiJ_G0034442.1 mouse_genomes_project 9 109842141 109846079 + MGP_WSBEiJ_P0093345 Plxnb1 protein_coding protein_coding MGP_WSBEiJ_T0093346.1 MGP_WSBEiJ_G0034442.1 mouse_genomes_project 9 109842690 109843997 + Plxnb1 protein_coding retained_intron MGP_WSBEiJ_T0093347.1 MGP_WSBEiJ_G0034442.1 mouse_genomes_project 9 109843152 109844121 + Plxnb1 protein_coding retained_intron MGP_WSBEiJ_T0093348.1 MGP_WSBEiJ_G0034442.1 mouse_genomes_project 9 109843983 109846108 + Plxnb1 protein_coding retained_intron MGP_WSBEiJ_T0089787.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10532827 10554289 - MGP_WSBEiJ_P0089787 Cep57 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089788.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10532829 10554405 - MGP_WSBEiJ_P0089788 Cep57 protein_coding protein_coding MGP_WSBEiJ_T0089789.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10532830 10554350 - MGP_WSBEiJ_P0089789 Cep57 protein_coding protein_coding MGP_WSBEiJ_T0089790.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10532860 10554253 - MGP_WSBEiJ_P0089790 Cep57 protein_coding protein_coding MGP_WSBEiJ_T0089791.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10533219 10545074 - MGP_WSBEiJ_P0089791 Cep57 protein_coding protein_coding MGP_WSBEiJ_T0089792.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10533586 10554323 - MGP_WSBEiJ_P0089792 Cep57 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089793.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10533784 10535451 - Cep57 protein_coding retained_intron MGP_WSBEiJ_T0089794.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10533853 10545053 - MGP_WSBEiJ_P0089794 Cep57 protein_coding protein_coding MGP_WSBEiJ_T0089795.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10535756 10545280 - MGP_WSBEiJ_P0089795 Cep57 protein_coding protein_coding MGP_WSBEiJ_T0089796.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10538115 10545316 - Cep57 protein_coding retained_intron MGP_WSBEiJ_T0089797.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10538488 10554351 - MGP_WSBEiJ_P0089797 Cep57 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089798.1 MGP_WSBEiJ_G0033471.1 mouse_genomes_project 9 10538503 10541447 - Cep57 protein_coding retained_intron MGP_WSBEiJ_T0092105.1 MGP_WSBEiJ_G0034218.1 mouse_genomes_project 9 86974998 87031876 + MGP_WSBEiJ_P0092105 Cyb5r4 protein_coding protein_coding MGP_WSBEiJ_T0092106.1 MGP_WSBEiJ_G0034218.1 mouse_genomes_project 9 86975071 87026042 + Cyb5r4 protein_coding processed_transcript MGP_WSBEiJ_T0092107.1 MGP_WSBEiJ_G0034218.1 mouse_genomes_project 9 86982412 87003313 + Cyb5r4 protein_coding retained_intron MGP_WSBEiJ_T0092108.1 MGP_WSBEiJ_G0034218.1 mouse_genomes_project 9 87017758 87031482 + MGP_WSBEiJ_P0092108 Cyb5r4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090629.1 MGP_WSBEiJ_G0033822.1 mouse_genomes_project 9 42444228 42457692 - MGP_WSBEiJ_P0090629 Vps11 protein_coding protein_coding MGP_WSBEiJ_T0010910.1 MGP_WSBEiJ_G0009067.1 mouse_genomes_project 9 109314632 109314717 + Mir425 miRNA miRNA MGP_WSBEiJ_T0005415.1 MGP_WSBEiJ_G0004574.1 mouse_genomes_project 9 96006253 96008353 - 1700065D16Rik antisense antisense MGP_WSBEiJ_T0005416.1 MGP_WSBEiJ_G0004574.1 mouse_genomes_project 9 96006255 96009158 - 1700065D16Rik antisense antisense MGP_WSBEiJ_T0005417.1 MGP_WSBEiJ_G0004574.1 mouse_genomes_project 9 96006255 96008707 - 1700065D16Rik antisense antisense MGP_WSBEiJ_T0005418.1 MGP_WSBEiJ_G0004574.1 mouse_genomes_project 9 96006256 96008707 - 1700065D16Rik antisense antisense MGP_WSBEiJ_T0005419.1 MGP_WSBEiJ_G0004574.1 mouse_genomes_project 9 96006387 96009156 - 1700065D16Rik antisense antisense MGP_WSBEiJ_T0017936.1 MGP_WSBEiJ_G0015160.1 mouse_genomes_project 9 62983947 62986955 - 1700055C04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0009132.1 MGP_WSBEiJ_G0007348.1 mouse_genomes_project 9 81213216 81218786 + Gm27226 lincRNA lincRNA MGP_WSBEiJ_T0090853.1 MGP_WSBEiJ_G0033897.1 mouse_genomes_project 9 48933229 48937255 - MGP_WSBEiJ_P0090853 Tex12 protein_coding protein_coding MGP_WSBEiJ_T0093349.1 MGP_WSBEiJ_G0034443.1 mouse_genomes_project 9 109881644 109904407 - MGP_WSBEiJ_P0093349 Fbxw21 protein_coding protein_coding MGP_WSBEiJ_T0093350.1 MGP_WSBEiJ_G0034443.1 mouse_genomes_project 9 109888697 109904406 - MGP_WSBEiJ_P0093350 Fbxw21 protein_coding protein_coding MGP_WSBEiJ_T0090567.1 MGP_WSBEiJ_G0033801.1 mouse_genomes_project 9 41242540 41262914 - MGP_WSBEiJ_P0090567 Oaf protein_coding protein_coding MGP_WSBEiJ_T0092986.1 MGP_WSBEiJ_G0034389.1 mouse_genomes_project 9 108637005 108652504 + MGP_WSBEiJ_P0092986 Camkv protein_coding protein_coding MGP_WSBEiJ_T0092987.1 MGP_WSBEiJ_G0034389.1 mouse_genomes_project 9 108637229 108652490 + Camkv protein_coding retained_intron MGP_WSBEiJ_T0092988.1 MGP_WSBEiJ_G0034389.1 mouse_genomes_project 9 108637239 108649001 + MGP_WSBEiJ_P0092988 Camkv protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092989.1 MGP_WSBEiJ_G0034389.1 mouse_genomes_project 9 108638631 108648350 + MGP_WSBEiJ_P0092989 Camkv protein_coding protein_coding MGP_WSBEiJ_T0092990.1 MGP_WSBEiJ_G0034389.1 mouse_genomes_project 9 108648071 108652496 + MGP_WSBEiJ_P0092990 Camkv protein_coding protein_coding MGP_WSBEiJ_T0089755.1 MGP_WSBEiJ_G0033460.1 mouse_genomes_project 9 5104528 5124282 + MGP_WSBEiJ_P0089755 1700128F08Rik protein_coding protein_coding MGP_WSBEiJ_T0091601.1 MGP_WSBEiJ_G0034108.1 mouse_genomes_project 9 68680268 68720721 + MGP_WSBEiJ_P0091601 Anxa2 protein_coding protein_coding MGP_WSBEiJ_T0091602.1 MGP_WSBEiJ_G0034108.1 mouse_genomes_project 9 68680364 68714131 + MGP_WSBEiJ_P0091602 Anxa2 protein_coding protein_coding MGP_WSBEiJ_T0091603.1 MGP_WSBEiJ_G0034108.1 mouse_genomes_project 9 68680714 68712733 + MGP_WSBEiJ_P0091603 Anxa2 protein_coding protein_coding MGP_WSBEiJ_T0091604.1 MGP_WSBEiJ_G0034108.1 mouse_genomes_project 9 68707404 68720721 + Anxa2 protein_coding retained_intron MGP_WSBEiJ_T0091605.1 MGP_WSBEiJ_G0034108.1 mouse_genomes_project 9 68708999 68720439 + MGP_WSBEiJ_P0091605 Anxa2 protein_coding protein_coding MGP_WSBEiJ_T0091606.1 MGP_WSBEiJ_G0034108.1 mouse_genomes_project 9 68715656 68716982 + Anxa2 protein_coding retained_intron MGP_WSBEiJ_T0090905.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49158110 49228441 + MGP_WSBEiJ_P0090905 Alg9 protein_coding protein_coding MGP_WSBEiJ_T0090906.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49158396 49228455 + MGP_WSBEiJ_P0090906 Alg9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090907.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49158458 49172658 + MGP_WSBEiJ_P0090907 Alg9 protein_coding protein_coding MGP_WSBEiJ_T0090908.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49158476 49207652 + MGP_WSBEiJ_P0090908 Alg9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090909.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49158637 49166426 + Alg9 protein_coding processed_transcript MGP_WSBEiJ_T0090910.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49159200 49162194 + Alg9 protein_coding processed_transcript MGP_WSBEiJ_T0090911.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49186448 49227676 + MGP_WSBEiJ_P0090911 Alg9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090912.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49194001 49228275 + MGP_WSBEiJ_P0090912 Alg9 protein_coding protein_coding MGP_WSBEiJ_T0090913.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49207979 49227884 + Alg9 protein_coding processed_transcript MGP_WSBEiJ_T0090914.1 MGP_WSBEiJ_G0033910.1 mouse_genomes_project 9 49220692 49228004 + Alg9 protein_coding processed_transcript MGP_WSBEiJ_T0089765.1 MGP_WSBEiJ_G0033465.1 mouse_genomes_project 9 6494600 7764032 - MGP_WSBEiJ_P0089765 Cntn5 protein_coding protein_coding MGP_WSBEiJ_T0089766.1 MGP_WSBEiJ_G0033465.1 mouse_genomes_project 9 6494678 7764081 - MGP_WSBEiJ_P0089766 Cntn5 protein_coding protein_coding MGP_WSBEiJ_T0089767.1 MGP_WSBEiJ_G0033465.1 mouse_genomes_project 9 6495072 7262885 - MGP_WSBEiJ_P0089767 Cntn5 protein_coding protein_coding MGP_WSBEiJ_T0089768.1 MGP_WSBEiJ_G0033465.1 mouse_genomes_project 9 6495072 7262885 - MGP_WSBEiJ_P0089768 Cntn5 protein_coding protein_coding MGP_WSBEiJ_T0089769.1 MGP_WSBEiJ_G0033465.1 mouse_genomes_project 9 7482712 7763755 - Cntn5 protein_coding retained_intron MGP_WSBEiJ_T0099885.1 MGP_WSBEiJ_G0038548.1 mouse_genomes_project 9 105002513 105002655 - Gm25904 snoRNA snoRNA MGP_WSBEiJ_T0091381.1 MGP_WSBEiJ_G0034051.1 mouse_genomes_project 9 63070421 63092620 + MGP_WSBEiJ_P0091381 Lctl protein_coding protein_coding MGP_WSBEiJ_T0091382.1 MGP_WSBEiJ_G0034051.1 mouse_genomes_project 9 63070446 63071410 + Lctl protein_coding retained_intron MGP_WSBEiJ_T0091383.1 MGP_WSBEiJ_G0034051.1 mouse_genomes_project 9 63070503 63071286 + Lctl protein_coding processed_transcript MGP_WSBEiJ_T0091384.1 MGP_WSBEiJ_G0034051.1 mouse_genomes_project 9 63070533 63092616 + MGP_WSBEiJ_P0091384 Lctl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091385.1 MGP_WSBEiJ_G0034051.1 mouse_genomes_project 9 63074858 63092607 + MGP_WSBEiJ_P0091385 Lctl protein_coding protein_coding MGP_WSBEiJ_T0091386.1 MGP_WSBEiJ_G0034051.1 mouse_genomes_project 9 63075226 63080128 + Lctl protein_coding retained_intron MGP_WSBEiJ_T0011548.1 MGP_WSBEiJ_G0009705.1 mouse_genomes_project 9 112255630 112255906 - Gm24860 misc_RNA misc_RNA MGP_WSBEiJ_T0011540.1 MGP_WSBEiJ_G0009697.1 mouse_genomes_project 9 77811554 77811885 - Rn7sk misc_RNA misc_RNA MGP_WSBEiJ_T0098578.1 MGP_WSBEiJ_G0037241.1 mouse_genomes_project 9 6134885 6134947 + Gm22815 snRNA snRNA MGP_WSBEiJ_T0090598.1 MGP_WSBEiJ_G0033811.1 mouse_genomes_project 9 42213280 42217744 + MGP_WSBEiJ_P0090598 Mcam protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090599.1 MGP_WSBEiJ_G0033811.1 mouse_genomes_project 9 42213501 42220623 + MGP_WSBEiJ_P0090599 Mcam protein_coding protein_coding MGP_WSBEiJ_T0090600.1 MGP_WSBEiJ_G0033811.1 mouse_genomes_project 9 42215355 42216084 + MGP_WSBEiJ_P0090600 Mcam protein_coding protein_coding MGP_WSBEiJ_T0090601.1 MGP_WSBEiJ_G0033811.1 mouse_genomes_project 9 42215672 42218492 + Mcam protein_coding retained_intron MGP_WSBEiJ_T0099865.1 MGP_WSBEiJ_G0038528.1 mouse_genomes_project 9 69412420 69412551 - Gm24257 snoRNA snoRNA MGP_WSBEiJ_T0091548.1 MGP_WSBEiJ_G0034097.1 mouse_genomes_project 9 65905893 65907926 + MGP_WSBEiJ_P0091548 Gm10647 protein_coding protein_coding MGP_WSBEiJ_T0093669.1 MGP_WSBEiJ_G0034507.1 mouse_genomes_project 9 116556992 116627015 - MGP_WSBEiJ_P0093669 Stt3b protein_coding protein_coding MGP_WSBEiJ_T0005394.1 MGP_WSBEiJ_G0004558.1 mouse_genomes_project 9 71818783 71819485 - Gm27231 antisense antisense MGP_WSBEiJ_T0091004.1 MGP_WSBEiJ_G0033943.1 mouse_genomes_project 9 53082135 53100215 + MGP_WSBEiJ_P0091004 Idh3a protein_coding protein_coding MGP_WSBEiJ_T0091723.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71829087 71877111 - MGP_WSBEiJ_P0091723 Tex9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091724.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71839080 71854311 - Tex9 protein_coding retained_intron MGP_WSBEiJ_T0091725.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71839811 71877367 - MGP_WSBEiJ_P0091725 Tex9 protein_coding protein_coding MGP_WSBEiJ_T0091726.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71839839 71877362 - MGP_WSBEiJ_P0091726 Tex9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091727.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71839915 71877256 - MGP_WSBEiJ_P0091727 Tex9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091728.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71839937 71877152 - MGP_WSBEiJ_P0091728 Tex9 protein_coding protein_coding MGP_WSBEiJ_T0091729.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71840662 71877116 - Tex9 protein_coding retained_intron MGP_WSBEiJ_T0091730.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71840681 71858893 - Tex9 protein_coding processed_transcript MGP_WSBEiJ_T0091731.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71840711 71872223 - MGP_WSBEiJ_P0091731 Tex9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091732.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71856350 71857192 - Tex9 protein_coding retained_intron MGP_WSBEiJ_T0091733.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71856450 71870617 - MGP_WSBEiJ_P0091733 Tex9 protein_coding protein_coding MGP_WSBEiJ_T0091734.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71856451 71877094 - MGP_WSBEiJ_P0091734 Tex9 protein_coding protein_coding MGP_WSBEiJ_T0091735.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71858829 71877244 - Tex9 protein_coding retained_intron MGP_WSBEiJ_T0091736.1 MGP_WSBEiJ_G0034131.1 mouse_genomes_project 9 71859008 71877090 - Tex9 protein_coding retained_intron MGP_WSBEiJ_T0005460.1 MGP_WSBEiJ_G0004602.1 mouse_genomes_project 9 108259381 108271905 - Gm16343 antisense antisense MGP_WSBEiJ_T0091426.1 MGP_WSBEiJ_G0034060.1 mouse_genomes_project 9 63696811 63720924 - MGP_WSBEiJ_P0091426 Rab11a protein_coding protein_coding MGP_WSBEiJ_T0091427.1 MGP_WSBEiJ_G0034060.1 mouse_genomes_project 9 63699766 63721043 - MGP_WSBEiJ_P0091427 Rab11a protein_coding protein_coding MGP_WSBEiJ_T0091428.1 MGP_WSBEiJ_G0034060.1 mouse_genomes_project 9 63699868 63709010 - Rab11a protein_coding retained_intron MGP_WSBEiJ_T0091429.1 MGP_WSBEiJ_G0034060.1 mouse_genomes_project 9 63699969 63710000 - MGP_WSBEiJ_P0091429 Rab11a protein_coding protein_coding MGP_WSBEiJ_T0091430.1 MGP_WSBEiJ_G0034060.1 mouse_genomes_project 9 63700033 63709743 - Rab11a protein_coding processed_transcript MGP_WSBEiJ_T0091431.1 MGP_WSBEiJ_G0034060.1 mouse_genomes_project 9 63700206 63720924 - MGP_WSBEiJ_P0091431 Rab11a protein_coding protein_coding MGP_WSBEiJ_T0091432.1 MGP_WSBEiJ_G0034060.1 mouse_genomes_project 9 63700216 63721053 - MGP_WSBEiJ_P0091432 Rab11a protein_coding protein_coding MGP_WSBEiJ_T0091433.1 MGP_WSBEiJ_G0034060.1 mouse_genomes_project 9 63709980 63719786 - Rab11a protein_coding processed_transcript MGP_WSBEiJ_T0090565.1 MGP_WSBEiJ_G0033800.1 mouse_genomes_project 9 41138344 41231611 - MGP_WSBEiJ_P0090565 Pou2f3 protein_coding protein_coding MGP_WSBEiJ_T0090566.1 MGP_WSBEiJ_G0033800.1 mouse_genomes_project 9 41138943 41225434 - MGP_WSBEiJ_P0090566 Pou2f3 protein_coding protein_coding MGP_WSBEiJ_T0090495.1 MGP_WSBEiJ_G0033774.1 mouse_genomes_project 9 37829524 37830457 - MGP_WSBEiJ_P0090495 Olfr980 protein_coding protein_coding MGP_WSBEiJ_T0091325.1 MGP_WSBEiJ_G0034035.1 mouse_genomes_project 9 60913092 60926449 - MGP_WSBEiJ_P0091325 Glce protein_coding protein_coding MGP_WSBEiJ_T0091326.1 MGP_WSBEiJ_G0034035.1 mouse_genomes_project 9 60913092 60979658 - MGP_WSBEiJ_P0091326 Glce protein_coding protein_coding MGP_WSBEiJ_T0091327.1 MGP_WSBEiJ_G0034035.1 mouse_genomes_project 9 60915856 60926683 - Glce protein_coding retained_intron MGP_WSBEiJ_T0091328.1 MGP_WSBEiJ_G0034035.1 mouse_genomes_project 9 60926310 60979703 - MGP_WSBEiJ_P0091328 Glce protein_coding protein_coding MGP_WSBEiJ_T0091329.1 MGP_WSBEiJ_G0034035.1 mouse_genomes_project 9 60936156 60979657 - Glce protein_coding processed_transcript MGP_WSBEiJ_T0002392.1 MGP_WSBEiJ_G0002308.1 mouse_genomes_project 9 102330626 102332875 - TEC TEC MGP_WSBEiJ_T0090717.1 MGP_WSBEiJ_G0033849.1 mouse_genomes_project 9 43264749 43280096 + MGP_WSBEiJ_P0090717 Scn2b protein_coding protein_coding MGP_WSBEiJ_T0090718.1 MGP_WSBEiJ_G0033849.1 mouse_genomes_project 9 43264754 43280094 + MGP_WSBEiJ_P0090718 Scn2b protein_coding protein_coding MGP_WSBEiJ_T0090413.1 MGP_WSBEiJ_G0033704.1 mouse_genomes_project 9 35710094 35711130 + MGP_WSBEiJ_P0090413 Olfr889 protein_coding protein_coding MGP_WSBEiJ_T0091096.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55637725 55655159 + MGP_WSBEiJ_P0091096 Sin3a protein_coding protein_coding MGP_WSBEiJ_T0091097.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55641023 55695861 + MGP_WSBEiJ_P0091097 Sin3a protein_coding protein_coding MGP_WSBEiJ_T0091098.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55642077 55695859 + MGP_WSBEiJ_P0091098 Sin3a protein_coding protein_coding MGP_WSBEiJ_T0091099.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55642100 55695861 + MGP_WSBEiJ_P0091099 Sin3a protein_coding protein_coding MGP_WSBEiJ_T0091100.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55642329 55661064 + MGP_WSBEiJ_P0091100 Sin3a protein_coding protein_coding MGP_WSBEiJ_T0091101.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55646859 55695861 + MGP_WSBEiJ_P0091101 Sin3a protein_coding protein_coding MGP_WSBEiJ_T0091102.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55652243 55695861 + MGP_WSBEiJ_P0091102 Sin3a protein_coding protein_coding MGP_WSBEiJ_T0091103.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55660908 55663538 + Sin3a protein_coding retained_intron MGP_WSBEiJ_T0091104.1 MGP_WSBEiJ_G0033975.1 mouse_genomes_project 9 55680297 55692687 + Sin3a protein_coding retained_intron MGP_WSBEiJ_T0099844.1 MGP_WSBEiJ_G0038507.1 mouse_genomes_project 9 36139288 36139412 + Gm23271 snoRNA snoRNA MGP_WSBEiJ_T0005335.1 MGP_WSBEiJ_G0004520.1 mouse_genomes_project 9 17469872 17479320 + Fbxl12os antisense antisense MGP_WSBEiJ_T0005336.1 MGP_WSBEiJ_G0004520.1 mouse_genomes_project 9 17470059 17477377 + Fbxl12os antisense antisense MGP_WSBEiJ_T0005337.1 MGP_WSBEiJ_G0004520.1 mouse_genomes_project 9 17470207 17477382 + Fbxl12os antisense antisense MGP_WSBEiJ_T0005338.1 MGP_WSBEiJ_G0004520.1 mouse_genomes_project 9 17477113 17478279 + Fbxl12os antisense antisense MGP_WSBEiJ_T0093524.1 MGP_WSBEiJ_G0034473.1 mouse_genomes_project 9 111856606 111871236 - MGP_WSBEiJ_P0093524 Tmie protein_coding protein_coding MGP_WSBEiJ_T0093525.1 MGP_WSBEiJ_G0034473.1 mouse_genomes_project 9 111866520 111870430 - Tmie protein_coding processed_transcript MGP_WSBEiJ_T0093526.1 MGP_WSBEiJ_G0034473.1 mouse_genomes_project 9 111866568 111867116 - Tmie protein_coding retained_intron MGP_WSBEiJ_T0002336.1 MGP_WSBEiJ_G0002253.1 mouse_genomes_project 9 72290745 72292655 + TEC TEC MGP_WSBEiJ_T0099896.1 MGP_WSBEiJ_G0038559.1 mouse_genomes_project 9 121732933 121733136 + Gm26448 snoRNA snoRNA MGP_WSBEiJ_T0090406.1 MGP_WSBEiJ_G0033698.1 mouse_genomes_project 9 35504848 35505913 + MGP_WSBEiJ_P0090406 Olfr878 protein_coding protein_coding MGP_WSBEiJ_T0100160.1 MGP_WSBEiJ_G0038738.1 mouse_genomes_project 9 56857361 56863277 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100161.1 MGP_WSBEiJ_G0038738.1 mouse_genomes_project 9 56862506 56863023 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0090570.1 MGP_WSBEiJ_G0033804.1 mouse_genomes_project 9 41795389 41862855 + MGP_WSBEiJ_P0090570 Nectin1 protein_coding protein_coding MGP_WSBEiJ_T0090047.1 MGP_WSBEiJ_G0033573.1 mouse_genomes_project 9 18422448 18425254 - MGP_WSBEiJ_P0090047 Tmed1 protein_coding protein_coding MGP_WSBEiJ_T0099840.1 MGP_WSBEiJ_G0038503.1 mouse_genomes_project 9 22647742 22647870 - Gm25346 snoRNA snoRNA MGP_WSBEiJ_T0091400.1 MGP_WSBEiJ_G0034053.1 mouse_genomes_project 9 63129837 63135174 + MGP_WSBEiJ_P0091400 Rpl4 protein_coding protein_coding MGP_WSBEiJ_T0091018.1 MGP_WSBEiJ_G0033947.1 mouse_genomes_project 9 53267285 53275625 + MGP_WSBEiJ_P0091018 Crabp1 protein_coding protein_coding MGP_WSBEiJ_T0091001.1 MGP_WSBEiJ_G0033941.1 mouse_genomes_project 9 53028325 53034367 + MGP_WSBEiJ_P0091001 Sh2d7 protein_coding protein_coding MGP_WSBEiJ_T0091002.1 MGP_WSBEiJ_G0033941.1 mouse_genomes_project 9 53028329 53033001 + MGP_WSBEiJ_P0091002 Sh2d7 protein_coding protein_coding MGP_WSBEiJ_T0093791.1 MGP_WSBEiJ_G0034547.1 mouse_genomes_project 9 122210906 122211641 + MGP_WSBEiJ_P0093791 5830454E08Rik protein_coding protein_coding MGP_WSBEiJ_T0010921.1 MGP_WSBEiJ_G0009078.1 mouse_genomes_project 9 122624660 122624722 + Mir7090 miRNA miRNA MGP_WSBEiJ_T0009160.1 MGP_WSBEiJ_G0007367.1 mouse_genomes_project 9 97257283 97278826 - Gm19325 lincRNA lincRNA MGP_WSBEiJ_T0002302.1 MGP_WSBEiJ_G0002219.1 mouse_genomes_project 9 18171220 18173916 + TEC TEC MGP_WSBEiJ_T0089902.1 MGP_WSBEiJ_G0033516.1 mouse_genomes_project 9 16184492 16185422 + MGP_WSBEiJ_P0089902 protein_coding protein_coding MGP_WSBEiJ_T0002358.1 MGP_WSBEiJ_G0002274.1 mouse_genomes_project 9 87129525 87130603 - TEC TEC MGP_WSBEiJ_T0002311.1 MGP_WSBEiJ_G0002228.1 mouse_genomes_project 9 31903750 31904660 + TEC TEC MGP_WSBEiJ_T0090432.1 MGP_WSBEiJ_G0033723.1 mouse_genomes_project 9 36206427 36208201 + MGP_WSBEiJ_P0090432 Olfr910 protein_coding protein_coding MGP_WSBEiJ_T0015629.1 MGP_WSBEiJ_G0013759.1 mouse_genomes_project 9 104856111 104856826 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0093268.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109623645 109624646 + Slc26a6 protein_coding processed_transcript MGP_WSBEiJ_T0093269.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109623710 109632507 + MGP_WSBEiJ_P0093269 Slc26a6 protein_coding protein_coding MGP_WSBEiJ_T0093270.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109624236 109635227 + MGP_WSBEiJ_P0093270 Slc26a6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093271.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109624398 109631192 + MGP_WSBEiJ_P0093271 Slc26a6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093272.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109624398 109634732 + MGP_WSBEiJ_P0093272 Slc26a6 protein_coding protein_coding MGP_WSBEiJ_T0093273.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109624404 109632507 + MGP_WSBEiJ_P0093273 Slc26a6 protein_coding protein_coding MGP_WSBEiJ_T0093274.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109624435 109632507 + Slc26a6 protein_coding retained_intron MGP_WSBEiJ_T0093275.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109624455 109632507 + Slc26a6 protein_coding retained_intron MGP_WSBEiJ_T0093276.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109624496 109632507 + MGP_WSBEiJ_P0093276 Slc26a6 protein_coding protein_coding MGP_WSBEiJ_T0093277.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109626024 109632507 + MGP_WSBEiJ_P0093277 Slc26a6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093278.1 MGP_WSBEiJ_G0034430.1 mouse_genomes_project 9 109634583 109635223 + MGP_WSBEiJ_P0093278 Slc26a6 protein_coding protein_coding MGP_WSBEiJ_T0092121.1 MGP_WSBEiJ_G0034223.1 mouse_genomes_project 9 88324138 88392538 - MGP_WSBEiJ_P0092121 Snx14 protein_coding protein_coding MGP_WSBEiJ_T0092122.1 MGP_WSBEiJ_G0034223.1 mouse_genomes_project 9 88324140 88347799 - Snx14 protein_coding retained_intron MGP_WSBEiJ_T0092123.1 MGP_WSBEiJ_G0034223.1 mouse_genomes_project 9 88324140 88392485 - MGP_WSBEiJ_P0092123 Snx14 protein_coding protein_coding MGP_WSBEiJ_T0092124.1 MGP_WSBEiJ_G0034223.1 mouse_genomes_project 9 88324152 88392545 - MGP_WSBEiJ_P0092124 Snx14 protein_coding protein_coding MGP_WSBEiJ_T0092125.1 MGP_WSBEiJ_G0034223.1 mouse_genomes_project 9 88324155 88392501 - MGP_WSBEiJ_P0092125 Snx14 protein_coding protein_coding MGP_WSBEiJ_T0092126.1 MGP_WSBEiJ_G0034223.1 mouse_genomes_project 9 88328945 88392516 - MGP_WSBEiJ_P0092126 Snx14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092127.1 MGP_WSBEiJ_G0034223.1 mouse_genomes_project 9 88341033 88343345 - Snx14 protein_coding retained_intron MGP_WSBEiJ_T0092129.1 MGP_WSBEiJ_G0034223.1 mouse_genomes_project 9 88372067 88392499 - Snx14 protein_coding retained_intron MGP_WSBEiJ_T0091105.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698189 55703244 + MGP_WSBEiJ_P0091105 Man2c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091106.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698189 55711852 + MGP_WSBEiJ_P0091106 Man2c1 protein_coding protein_coding MGP_WSBEiJ_T0091107.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698267 55705918 + MGP_WSBEiJ_P0091107 Man2c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091108.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698267 55709840 + MGP_WSBEiJ_P0091108 Man2c1 protein_coding protein_coding MGP_WSBEiJ_T0091109.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698269 55704253 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091110.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698269 55711333 + MGP_WSBEiJ_P0091110 Man2c1 protein_coding protein_coding MGP_WSBEiJ_T0091111.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698276 55698753 + Man2c1 protein_coding processed_transcript MGP_WSBEiJ_T0091112.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698285 55711334 + MGP_WSBEiJ_P0091112 Man2c1 protein_coding protein_coding MGP_WSBEiJ_T0091113.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698285 55708527 + MGP_WSBEiJ_P0091113 Man2c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091114.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698285 55706932 + MGP_WSBEiJ_P0091114 Man2c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091115.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55698873 55704227 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091116.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55704031 55706652 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091117.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55704713 55706125 + MGP_WSBEiJ_P0091117 Man2c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091118.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55705866 55706966 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091119.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55707171 55709858 + MGP_WSBEiJ_P0091119 Man2c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091120.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55707554 55709541 + MGP_WSBEiJ_P0091120 Man2c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091121.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55707996 55709123 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091122.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55708628 55711343 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091123.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55708628 55709842 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091124.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55709006 55710309 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091125.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55709407 55711337 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091126.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55709812 55711343 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091127.1 MGP_WSBEiJ_G0033976.1 mouse_genomes_project 9 55710507 55711337 + Man2c1 protein_coding retained_intron MGP_WSBEiJ_T0091781.1 MGP_WSBEiJ_G0034141.1 mouse_genomes_project 9 72472854 72530739 + MGP_WSBEiJ_P0091781 Rab27a protein_coding protein_coding MGP_WSBEiJ_T0091782.1 MGP_WSBEiJ_G0034141.1 mouse_genomes_project 9 72472857 72530703 + MGP_WSBEiJ_P0091782 Rab27a protein_coding protein_coding MGP_WSBEiJ_T0091783.1 MGP_WSBEiJ_G0034141.1 mouse_genomes_project 9 72472984 72518507 + Rab27a protein_coding retained_intron MGP_WSBEiJ_T0091784.1 MGP_WSBEiJ_G0034141.1 mouse_genomes_project 9 72527944 72529526 + Rab27a protein_coding retained_intron MGP_WSBEiJ_T0093237.1 MGP_WSBEiJ_G0034426.1 mouse_genomes_project 9 109448279 109496158 + MGP_WSBEiJ_P0093237 Prkar2a protein_coding protein_coding MGP_WSBEiJ_T0093238.1 MGP_WSBEiJ_G0034426.1 mouse_genomes_project 9 109451107 109518606 + MGP_WSBEiJ_P0093238 Prkar2a protein_coding protein_coding MGP_WSBEiJ_T0093239.1 MGP_WSBEiJ_G0034426.1 mouse_genomes_project 9 109451421 109515164 + MGP_WSBEiJ_P0093239 Prkar2a protein_coding protein_coding MGP_WSBEiJ_T0093240.1 MGP_WSBEiJ_G0034426.1 mouse_genomes_project 9 109481975 109512433 + MGP_WSBEiJ_P0093240 Prkar2a protein_coding protein_coding MGP_WSBEiJ_T0093241.1 MGP_WSBEiJ_G0034426.1 mouse_genomes_project 9 109507463 109508787 + Prkar2a protein_coding retained_intron MGP_WSBEiJ_T0093242.1 MGP_WSBEiJ_G0034426.1 mouse_genomes_project 9 109516414 109517673 + Prkar2a protein_coding processed_transcript MGP_WSBEiJ_T0091581.1 MGP_WSBEiJ_G0034103.1 mouse_genomes_project 9 66911973 66913467 + MGP_WSBEiJ_P0091581 C2cd4b protein_coding protein_coding MGP_WSBEiJ_T0089917.1 MGP_WSBEiJ_G0033531.1 mouse_genomes_project 9 16963961 16967619 + MGP_WSBEiJ_P0089917 Olfr868 protein_coding protein_coding MGP_WSBEiJ_T0009181.1 MGP_WSBEiJ_G0007386.1 mouse_genomes_project 9 108278979 108279444 + Gm38150 lincRNA lincRNA MGP_WSBEiJ_T0017937.1 MGP_WSBEiJ_G0015161.1 mouse_genomes_project 9 63032051 63038245 + Scarletltr processed_transcript processed_transcript MGP_WSBEiJ_T0091951.1 MGP_WSBEiJ_G0034192.1 mouse_genomes_project 9 79524967 79551352 - MGP_WSBEiJ_P0091951 Tmem30a protein_coding protein_coding MGP_WSBEiJ_T0091952.1 MGP_WSBEiJ_G0034192.1 mouse_genomes_project 9 79524967 79551429 - MGP_WSBEiJ_P0091952 Tmem30a protein_coding protein_coding MGP_WSBEiJ_T0091953.1 MGP_WSBEiJ_G0034192.1 mouse_genomes_project 9 79528591 79551352 - Tmem30a protein_coding retained_intron MGP_WSBEiJ_T0091954.1 MGP_WSBEiJ_G0034192.1 mouse_genomes_project 9 79532866 79551352 - Tmem30a protein_coding retained_intron MGP_WSBEiJ_T0090640.1 MGP_WSBEiJ_G0033825.1 mouse_genomes_project 9 42495428 42499215 - MGP_WSBEiJ_P0090640 Trappc4 protein_coding protein_coding MGP_WSBEiJ_T0090094.1 MGP_WSBEiJ_G0033594.1 mouse_genomes_project 9 19032745 19048461 - MGP_WSBEiJ_P0090094 Zfp653 protein_coding protein_coding MGP_WSBEiJ_T0090095.1 MGP_WSBEiJ_G0033594.1 mouse_genomes_project 9 19032745 19048461 - MGP_WSBEiJ_P0090095 Zfp653 protein_coding protein_coding MGP_WSBEiJ_T0091213.1 MGP_WSBEiJ_G0034005.1 mouse_genomes_project 9 56910061 56933664 + MGP_WSBEiJ_P0091213 Stoml1 protein_coding protein_coding MGP_WSBEiJ_T0091831.1 MGP_WSBEiJ_G0034151.1 mouse_genomes_project 9 74708514 74783849 + MGP_WSBEiJ_P0091831 Myo5c protein_coding protein_coding MGP_WSBEiJ_T0091832.1 MGP_WSBEiJ_G0034151.1 mouse_genomes_project 9 74720667 74782445 + MGP_WSBEiJ_P0091832 Myo5c protein_coding unknown_likely_coding MGP_WSBEiJ_T0092555.1 MGP_WSBEiJ_G0034318.1 mouse_genomes_project 9 104532268 104573137 + MGP_WSBEiJ_P0092555 Gm28305 protein_coding protein_coding MGP_WSBEiJ_T0090857.1 MGP_WSBEiJ_G0033900.1 mouse_genomes_project 9 48983866 48985286 + MGP_WSBEiJ_P0090857 Timm8b protein_coding protein_coding MGP_WSBEiJ_T0089881.1 MGP_WSBEiJ_G0033500.1 mouse_genomes_project 9 15230210 15238964 + MGP_WSBEiJ_P0089881 Ubtfl1 protein_coding protein_coding MGP_WSBEiJ_T0089882.1 MGP_WSBEiJ_G0033500.1 mouse_genomes_project 9 15230212 15237873 + MGP_WSBEiJ_P0089882 Ubtfl1 protein_coding protein_coding MGP_WSBEiJ_T0089883.1 MGP_WSBEiJ_G0033500.1 mouse_genomes_project 9 15235966 15237615 + MGP_WSBEiJ_P0089883 Ubtfl1 protein_coding protein_coding MGP_WSBEiJ_T0009203.1 MGP_WSBEiJ_G0007402.1 mouse_genomes_project 9 122579335 122580816 - 1700020M21Rik lincRNA lincRNA MGP_WSBEiJ_T0092370.1 MGP_WSBEiJ_G0034280.1 mouse_genomes_project 9 99322979 99432960 - MGP_WSBEiJ_P0092370 Pik3cb protein_coding protein_coding MGP_WSBEiJ_T0092371.1 MGP_WSBEiJ_G0034280.1 mouse_genomes_project 9 99324726 99432798 - MGP_WSBEiJ_P0092371 Pik3cb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092372.1 MGP_WSBEiJ_G0034280.1 mouse_genomes_project 9 99390036 99433494 - MGP_WSBEiJ_P0092372 Pik3cb protein_coding protein_coding MGP_WSBEiJ_T0090081.1 MGP_WSBEiJ_G0033586.1 mouse_genomes_project 9 18880665 18890792 + MGP_WSBEiJ_P0090081 Ccdc159 protein_coding protein_coding MGP_WSBEiJ_T0090082.1 MGP_WSBEiJ_G0033586.1 mouse_genomes_project 9 18880665 18890792 + MGP_WSBEiJ_P0090082 Ccdc159 protein_coding protein_coding MGP_WSBEiJ_T0096865.1 MGP_WSBEiJ_G0035546.1 mouse_genomes_project 9 15843163 15843432 - pseudogene pseudogene MGP_WSBEiJ_T0005413.1 MGP_WSBEiJ_G0004572.1 mouse_genomes_project 9 95625876 95627750 + Gm28424 antisense antisense MGP_WSBEiJ_T0011545.1 MGP_WSBEiJ_G0009702.1 mouse_genomes_project 9 103452996 103453318 + Gm25842 misc_RNA misc_RNA MGP_WSBEiJ_T0089990.1 MGP_WSBEiJ_G0033553.1 mouse_genomes_project 9 17888040 17893882 + MGP_WSBEiJ_P0089990 Mrpl4 protein_coding protein_coding MGP_WSBEiJ_T0099890.1 MGP_WSBEiJ_G0038553.1 mouse_genomes_project 9 111055421 111055559 - Gm23377 snoRNA snoRNA MGP_WSBEiJ_T0090252.1 MGP_WSBEiJ_G0033647.1 mouse_genomes_project 9 32454941 32506401 - MGP_WSBEiJ_P0090252 St3gal4 protein_coding protein_coding MGP_WSBEiJ_T0091896.1 MGP_WSBEiJ_G0034172.1 mouse_genomes_project 9 77683721 77699134 + MGP_WSBEiJ_P0091896 Gcm1 protein_coding protein_coding MGP_WSBEiJ_T0098635.1 MGP_WSBEiJ_G0037298.1 mouse_genomes_project 9 104012377 104012480 - Gm26360 snRNA snRNA MGP_WSBEiJ_T0005373.1 MGP_WSBEiJ_G0004545.1 mouse_genomes_project 9 55665607 55698790 - Man2c1os antisense antisense MGP_WSBEiJ_T0005374.1 MGP_WSBEiJ_G0004545.1 mouse_genomes_project 9 55695602 55698398 - Man2c1os antisense antisense MGP_WSBEiJ_T0005375.1 MGP_WSBEiJ_G0004545.1 mouse_genomes_project 9 55697475 55698744 - Man2c1os antisense antisense MGP_WSBEiJ_T0090026.1 MGP_WSBEiJ_G0033570.1 mouse_genomes_project 9 18271513 18309253 + MGP_WSBEiJ_P0090026 Ilf3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0090027.1 MGP_WSBEiJ_G0033570.1 mouse_genomes_project 9 18271646 18309251 + MGP_WSBEiJ_P0090027 Ilf3 protein_coding protein_coding MGP_WSBEiJ_T0090028.1 MGP_WSBEiJ_G0033570.1 mouse_genomes_project 9 18271646 18312812 + MGP_WSBEiJ_P0090028 Ilf3 protein_coding protein_coding MGP_WSBEiJ_T0090029.1 MGP_WSBEiJ_G0033570.1 mouse_genomes_project 9 18310325 18312821 + MGP_WSBEiJ_P0090029 Ilf3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0091438.1 MGP_WSBEiJ_G0034064.1 mouse_genomes_project 9 63984158 64024623 - MGP_WSBEiJ_P0091438 Hacd3 protein_coding protein_coding MGP_WSBEiJ_T0099845.1 MGP_WSBEiJ_G0038508.1 mouse_genomes_project 9 37315748 37315875 - Gm24278 snoRNA snoRNA MGP_WSBEiJ_T0092748.1 MGP_WSBEiJ_G0034351.1 mouse_genomes_project 9 107136325 107138607 + MGP_WSBEiJ_P0092748 Iqcf1 protein_coding protein_coding MGP_WSBEiJ_T0092749.1 MGP_WSBEiJ_G0034351.1 mouse_genomes_project 9 107136350 107138612 + MGP_WSBEiJ_P0092749 Iqcf1 protein_coding protein_coding MGP_WSBEiJ_T0090939.1 MGP_WSBEiJ_G0033917.1 mouse_genomes_project 9 49680243 49688536 - MGP_WSBEiJ_P0090939 Gm684 protein_coding protein_coding MGP_WSBEiJ_T0015624.1 MGP_WSBEiJ_G0013754.1 mouse_genomes_project 9 102985954 102987455 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0091014.1 MGP_WSBEiJ_G0033946.1 mouse_genomes_project 9 53215865 53235588 - MGP_WSBEiJ_P0091014 Wdr61 protein_coding protein_coding MGP_WSBEiJ_T0091015.1 MGP_WSBEiJ_G0033946.1 mouse_genomes_project 9 53218285 53235609 - MGP_WSBEiJ_P0091015 Wdr61 protein_coding protein_coding MGP_WSBEiJ_T0091016.1 MGP_WSBEiJ_G0033946.1 mouse_genomes_project 9 53220350 53221945 - Wdr61 protein_coding retained_intron MGP_WSBEiJ_T0091017.1 MGP_WSBEiJ_G0033946.1 mouse_genomes_project 9 53223655 53225488 - Wdr61 protein_coding retained_intron MGP_WSBEiJ_T0092979.1 MGP_WSBEiJ_G0034386.1 mouse_genomes_project 9 108589602 108604629 + MGP_WSBEiJ_P0092979 Mon1a protein_coding protein_coding MGP_WSBEiJ_T0092980.1 MGP_WSBEiJ_G0034386.1 mouse_genomes_project 9 108589633 108604634 + MGP_WSBEiJ_P0092980 Mon1a protein_coding protein_coding MGP_WSBEiJ_T0002352.1 MGP_WSBEiJ_G0002269.1 mouse_genomes_project 9 85660318 85661670 + TEC TEC MGP_WSBEiJ_T0091319.1 MGP_WSBEiJ_G0034032.1 mouse_genomes_project 9 60756374 60757629 - MGP_WSBEiJ_P0091319 Rplp1 protein_coding protein_coding MGP_WSBEiJ_T0099846.1 MGP_WSBEiJ_G0038509.1 mouse_genomes_project 9 38707168 38707254 + Snord14c snoRNA snoRNA MGP_WSBEiJ_T0010893.1 MGP_WSBEiJ_G0009050.1 mouse_genomes_project 9 68684398 68684486 + Mir3109 miRNA miRNA MGP_WSBEiJ_T0098637.1 MGP_WSBEiJ_G0037300.1 mouse_genomes_project 9 106612579 106612656 + Gm24631 snRNA snRNA MGP_WSBEiJ_T0089913.1 MGP_WSBEiJ_G0033527.1 mouse_genomes_project 9 16752413 16753448 - MGP_WSBEiJ_P0089913 Olfr862 protein_coding protein_coding MGP_WSBEiJ_T0089997.1 MGP_WSBEiJ_G0033560.1 mouse_genomes_project 9 17993009 18020640 - MGP_WSBEiJ_P0089997 Tyk2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0089998.1 MGP_WSBEiJ_G0033560.1 mouse_genomes_project 9 17993014 18016754 - MGP_WSBEiJ_P0089998 Tyk2 protein_coding protein_coding MGP_WSBEiJ_T0089742.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4810365 4887607 - MGP_WSBEiJ_P0089742 Yap1 protein_coding protein_coding MGP_WSBEiJ_T0089743.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4810365 4887599 - MGP_WSBEiJ_P0089743 Yap1 protein_coding protein_coding MGP_WSBEiJ_T0089744.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4812863 4887401 - MGP_WSBEiJ_P0089744 Yap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089745.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4812863 4887401 - MGP_WSBEiJ_P0089745 Yap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089746.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4812863 4884716 - MGP_WSBEiJ_P0089746 Yap1 protein_coding protein_coding MGP_WSBEiJ_T0089747.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4812863 4887401 - MGP_WSBEiJ_P0089747 Yap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089748.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4842267 4845783 - Yap1 protein_coding processed_transcript MGP_WSBEiJ_T0089749.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4853865 4886768 - Yap1 protein_coding processed_transcript MGP_WSBEiJ_T0089750.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4853907 4886786 - Yap1 protein_coding processed_transcript MGP_WSBEiJ_T0089751.1 MGP_WSBEiJ_G0033457.1 mouse_genomes_project 9 4879933 4887607 - Yap1 protein_coding retained_intron MGP_WSBEiJ_T0092914.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108336136 108346011 - MGP_WSBEiJ_P0092914 Slc38a3 protein_coding protein_coding MGP_WSBEiJ_T0092915.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108336714 108355126 - MGP_WSBEiJ_P0092915 Slc38a3 protein_coding protein_coding MGP_WSBEiJ_T0092916.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108336716 108356752 - Slc38a3 protein_coding retained_intron MGP_WSBEiJ_T0092917.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108336720 108355178 - MGP_WSBEiJ_P0092917 Slc38a3 protein_coding protein_coding MGP_WSBEiJ_T0092918.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108336720 108356717 - MGP_WSBEiJ_P0092918 Slc38a3 protein_coding protein_coding MGP_WSBEiJ_T0092919.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108341509 108343124 - MGP_WSBEiJ_P0092919 Slc38a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092920.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108341539 108342711 - MGP_WSBEiJ_P0092920 Slc38a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092921.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108341559 108342502 - Slc38a3 protein_coding retained_intron MGP_WSBEiJ_T0092922.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108342883 108343743 - Slc38a3 protein_coding retained_intron MGP_WSBEiJ_T0092923.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108343378 108345701 - Slc38a3 protein_coding processed_transcript MGP_WSBEiJ_T0092924.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108344111 108357270 - MGP_WSBEiJ_P0092924 Slc38a3 protein_coding protein_coding MGP_WSBEiJ_T0092925.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108344292 108356749 - MGP_WSBEiJ_P0092925 Slc38a3 protein_coding protein_coding MGP_WSBEiJ_T0092926.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108345117 108353172 - MGP_WSBEiJ_P0092926 Slc38a3 protein_coding protein_coding MGP_WSBEiJ_T0092927.1 MGP_WSBEiJ_G0034381.1 mouse_genomes_project 9 108345700 108356762 - Slc38a3 protein_coding processed_transcript MGP_WSBEiJ_T0098638.1 MGP_WSBEiJ_G0037301.1 mouse_genomes_project 9 107489941 107490046 - Gm22384 snRNA snRNA MGP_WSBEiJ_T0002360.1 MGP_WSBEiJ_G0002276.1 mouse_genomes_project 9 87677688 87679517 - TEC TEC MGP_WSBEiJ_T0005353.1 MGP_WSBEiJ_G0004533.1 mouse_genomes_project 9 40455175 40489829 + Gm16322 antisense antisense MGP_WSBEiJ_T0005354.1 MGP_WSBEiJ_G0004533.1 mouse_genomes_project 9 40456194 40486569 + Gm16322 antisense antisense MGP_WSBEiJ_T0090411.1 MGP_WSBEiJ_G0033702.1 mouse_genomes_project 9 35651331 35652258 + MGP_WSBEiJ_P0090411 Olfr885 protein_coding protein_coding MGP_WSBEiJ_T0089945.1 MGP_WSBEiJ_G0033540.1 mouse_genomes_project 9 17441293 17456205 + MGP_WSBEiJ_P0089945 Zfp846 protein_coding protein_coding MGP_WSBEiJ_T0089946.1 MGP_WSBEiJ_G0033540.1 mouse_genomes_project 9 17441494 17456207 + MGP_WSBEiJ_P0089946 Zfp846 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0089947.1 MGP_WSBEiJ_G0033540.1 mouse_genomes_project 9 17447712 17455484 + MGP_WSBEiJ_P0089947 Zfp846 protein_coding protein_coding MGP_WSBEiJ_T0093582.1 MGP_WSBEiJ_G0034484.1 mouse_genomes_project 9 112327567 112411793 + MGP_WSBEiJ_P0093582 Trank1 protein_coding protein_coding MGP_WSBEiJ_T0093583.1 MGP_WSBEiJ_G0034484.1 mouse_genomes_project 9 112327768 112374057 + Trank1 protein_coding processed_transcript MGP_WSBEiJ_T0093584.1 MGP_WSBEiJ_G0034484.1 mouse_genomes_project 9 112327924 112360499 + MGP_WSBEiJ_P0093584 Trank1 protein_coding protein_coding MGP_WSBEiJ_T0093585.1 MGP_WSBEiJ_G0034484.1 mouse_genomes_project 9 112391000 112411793 + Trank1 protein_coding processed_transcript MGP_WSBEiJ_T0093586.1 MGP_WSBEiJ_G0034484.1 mouse_genomes_project 9 112391063 112405266 + Trank1 protein_coding processed_transcript MGP_WSBEiJ_T0093587.1 MGP_WSBEiJ_G0034484.1 mouse_genomes_project 9 112391068 112401372 + Trank1 protein_coding processed_transcript MGP_WSBEiJ_T0093588.1 MGP_WSBEiJ_G0034484.1 mouse_genomes_project 9 112402373 112406184 + Trank1 protein_coding retained_intron MGP_WSBEiJ_T0089682.1 MGP_WSBEiJ_G0033437.1 mouse_genomes_project 9 1160286 1540672 - MGP_WSBEiJ_P0089682 Gria4 protein_coding protein_coding MGP_WSBEiJ_T0089683.1 MGP_WSBEiJ_G0033437.1 mouse_genomes_project 9 1160286 1540672 - MGP_WSBEiJ_P0089683 Gria4 protein_coding protein_coding MGP_WSBEiJ_T0089684.1 MGP_WSBEiJ_G0033437.1 mouse_genomes_project 9 1227720 1540672 - MGP_WSBEiJ_P0089684 Gria4 protein_coding protein_coding MGP_WSBEiJ_T0089685.1 MGP_WSBEiJ_G0033438.1 mouse_genomes_project 9 2061864 2070649 + MGP_WSBEiJ_P0089685 Casp1 protein_coding protein_coding MGP_WSBEiJ_T0009062.1 MGP_WSBEiJ_G0007289.1 mouse_genomes_project 9 18658073 18665118 - Gm26511 lincRNA lincRNA MGP_WSBEiJ_T0015639.1 MGP_WSBEiJ_G0013769.1 mouse_genomes_project 9 112076889 112077242 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017978.1 MGP_WSBEiJ_G0015177.1 mouse_genomes_project 9 108757835 108764758 + Gm20529 processed_transcript processed_transcript MGP_WSBEiJ_T0099861.1 MGP_WSBEiJ_G0038524.1 mouse_genomes_project 9 63876570 63876712 - Gm24347 snoRNA snoRNA MGP_WSBEiJ_T0092985.1 MGP_WSBEiJ_G0034388.1 mouse_genomes_project 9 108629766 108633759 + MGP_WSBEiJ_P0092985 Actl11 protein_coding protein_coding MGP_WSBEiJ_T0093469.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111496490 111585074 + MGP_WSBEiJ_P0093469 Setd2 protein_coding protein_coding MGP_WSBEiJ_T0093470.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111511874 111585055 + MGP_WSBEiJ_P0093470 Setd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093471.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111515200 111529182 + MGP_WSBEiJ_P0093471 Setd2 protein_coding protein_coding MGP_WSBEiJ_T0093472.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111525026 111532512 + Setd2 protein_coding retained_intron MGP_WSBEiJ_T0093473.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111525108 111535305 + Setd2 protein_coding retained_intron MGP_WSBEiJ_T0093474.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111538183 111585048 + MGP_WSBEiJ_P0093474 Setd2 protein_coding protein_coding MGP_WSBEiJ_T0093475.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111538445 111560459 + MGP_WSBEiJ_P0093475 Setd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093476.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111560323 111571119 + Setd2 protein_coding retained_intron MGP_WSBEiJ_T0093477.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111568190 111584589 + MGP_WSBEiJ_P0093477 Setd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093478.1 MGP_WSBEiJ_G0034461.1 mouse_genomes_project 9 111584041 111585048 + Setd2 protein_coding retained_intron MGP_WSBEiJ_T0090300.1 MGP_WSBEiJ_G0033657.1 mouse_genomes_project 9 32962053 32971630 - MGP_WSBEiJ_P0090300 Hyls1 protein_coding protein_coding MGP_WSBEiJ_T0090301.1 MGP_WSBEiJ_G0033657.1 mouse_genomes_project 9 32965688 32971329 - Hyls1 protein_coding retained_intron MGP_WSBEiJ_T0091090.1 MGP_WSBEiJ_G0033969.1 mouse_genomes_project 9 55399616 55402922 - MGP_WSBEiJ_P0091090 Odf3l1 protein_coding protein_coding MGP_WSBEiJ_T0093205.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109315741 109318630 + MGP_WSBEiJ_P0093205 Dalrd3 protein_coding protein_coding MGP_WSBEiJ_T0093206.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109315765 109317375 + MGP_WSBEiJ_P0093206 Dalrd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0093207.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109315769 109316542 + Dalrd3 protein_coding retained_intron MGP_WSBEiJ_T0093208.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109316551 109317837 + Dalrd3 protein_coding retained_intron MGP_WSBEiJ_T0093209.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109316862 109317696 + Dalrd3 protein_coding retained_intron MGP_WSBEiJ_T0093210.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109317092 109318629 + Dalrd3 protein_coding retained_intron MGP_WSBEiJ_T0093211.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109317373 109318387 + MGP_WSBEiJ_P0093211 Dalrd3 protein_coding protein_coding MGP_WSBEiJ_T0093212.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109318122 109318627 + Dalrd3 protein_coding retained_intron MGP_WSBEiJ_T0093214.1 MGP_WSBEiJ_G0034421.1 mouse_genomes_project 9 109318247 109318511 + MGP_WSBEiJ_P0093214 Dalrd3 protein_coding protein_coding MGP_WSBEiJ_T0098634.1 MGP_WSBEiJ_G0037297.1 mouse_genomes_project 9 102805384 102805487 + Gm22894 snRNA snRNA MGP_WSBEiJ_T0091082.1 MGP_WSBEiJ_G0033965.1 mouse_genomes_project 9 54659756 54687163 - MGP_WSBEiJ_P0091082 Tspan3 protein_coding protein_coding MGP_WSBEiJ_T0090623.1 MGP_WSBEiJ_G0033817.1 mouse_genomes_project 9 42382718 42395472 - MGP_WSBEiJ_P0090623 Hinfp protein_coding protein_coding MGP_WSBEiJ_T0015623.1 MGP_WSBEiJ_G0013753.1 mouse_genomes_project 9 101857590 101858443 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090161.1 MGP_WSBEiJ_G0033620.1 mouse_genomes_project 9 23920237 23966889 - MGP_WSBEiJ_P0090161 Glb1l3 protein_coding protein_coding MGP_WSBEiJ_T0002388.1 MGP_WSBEiJ_G0002304.1 mouse_genomes_project 9 101519604 101524830 + TEC TEC MGP_WSBEiJ_T0091457.1 MGP_WSBEiJ_G0034075.1 mouse_genomes_project 9 64440847 64452862 - MGP_WSBEiJ_P0091457 Slc51b protein_coding protein_coding MGP_WSBEiJ_T0098593.1 MGP_WSBEiJ_G0037256.1 mouse_genomes_project 9 42574568 42574685 - Gm22540 snRNA snRNA MGP_WSBEiJ_T0092945.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108429406 108463116 - MGP_WSBEiJ_P0092945 Rbm5 protein_coding protein_coding MGP_WSBEiJ_T0092946.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108429529 108463101 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092947.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108429530 108450451 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092948.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108429534 108463100 - MGP_WSBEiJ_P0092948 Rbm5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092949.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108429534 108463107 - MGP_WSBEiJ_P0092949 Rbm5 protein_coding protein_coding MGP_WSBEiJ_T0092950.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108431008 108433332 - MGP_WSBEiJ_P0092950 Rbm5 protein_coding protein_coding MGP_WSBEiJ_T0092951.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108432378 108433280 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092952.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108433314 108440314 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092953.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108434239 108440203 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092954.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108435088 108463071 - MGP_WSBEiJ_P0092954 Rbm5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092955.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108435189 108442204 - MGP_WSBEiJ_P0092955 Rbm5 protein_coding protein_coding MGP_WSBEiJ_T0092956.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108440584 108442256 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092957.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108440791 108444034 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092958.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108442174 108444546 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092959.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108442203 108459717 - MGP_WSBEiJ_P0092959 Rbm5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092960.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108444038 108463092 - MGP_WSBEiJ_P0092960 Rbm5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092961.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108444042 108447127 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092962.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108444066 108462615 - MGP_WSBEiJ_P0092962 Rbm5 protein_coding protein_coding MGP_WSBEiJ_T0092963.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108448337 108463079 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092964.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108450206 108463079 - MGP_WSBEiJ_P0092964 Rbm5 protein_coding protein_coding MGP_WSBEiJ_T0092965.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108450271 108463065 - MGP_WSBEiJ_P0092965 Rbm5 protein_coding protein_coding MGP_WSBEiJ_T0092966.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108456182 108463109 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092967.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108458757 108463106 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0092968.1 MGP_WSBEiJ_G0034384.1 mouse_genomes_project 9 108461304 108463079 - Rbm5 protein_coding retained_intron MGP_WSBEiJ_T0091861.1 MGP_WSBEiJ_G0034165.1 mouse_genomes_project 9 76049080 76132942 - MGP_WSBEiJ_P0091861 Fam83b protein_coding protein_coding MGP_WSBEiJ_T0091862.1 MGP_WSBEiJ_G0034165.1 mouse_genomes_project 9 76049731 76109699 - MGP_WSBEiJ_P0091862 Fam83b protein_coding protein_coding MGP_WSBEiJ_T0005351.1 MGP_WSBEiJ_G0004531.1 mouse_genomes_project 9 38610132 38611170 - Gm16095 antisense antisense MGP_WSBEiJ_T0090569.1 MGP_WSBEiJ_G0033803.1 mouse_genomes_project 9 41334566 41361425 + MGP_WSBEiJ_P0090569 Trim29 protein_coding protein_coding MGP_WSBEiJ_T0091322.1 MGP_WSBEiJ_G0034034.1 mouse_genomes_project 9 60800634 60878778 - Paqr5 protein_coding processed_transcript MGP_WSBEiJ_T0091323.1 MGP_WSBEiJ_G0034034.1 mouse_genomes_project 9 60800891 60878833 - MGP_WSBEiJ_P0091323 Paqr5 protein_coding protein_coding MGP_WSBEiJ_T0091324.1 MGP_WSBEiJ_G0034034.1 mouse_genomes_project 9 60803199 60826738 - MGP_WSBEiJ_P0091324 Paqr5 protein_coding protein_coding MGP_WSBEiJ_T0005463.1 MGP_WSBEiJ_G0004605.1 mouse_genomes_project 9 108694339 108698312 - 4921523L03Rik antisense antisense MGP_WSBEiJ_T0002310.1 MGP_WSBEiJ_G0002227.1 mouse_genomes_project 9 31807415 31831338 - TEC TEC MGP_WSBEiJ_T0093671.1 MGP_WSBEiJ_G0034509.1 mouse_genomes_project 9 117463439 117558186 - MGP_WSBEiJ_P0093671 Tgfbr2 protein_coding protein_coding MGP_WSBEiJ_T0093672.1 MGP_WSBEiJ_G0034509.1 mouse_genomes_project 9 117463439 117558186 - MGP_WSBEiJ_P0093672 Tgfbr2 protein_coding protein_coding MGP_WSBEiJ_T0099849.1 MGP_WSBEiJ_G0038512.1 mouse_genomes_project 9 40295693 40295825 - Gm26272 snoRNA snoRNA MGP_WSBEiJ_T0092018.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83195331 83234839 - MGP_WSBEiJ_P0092018 Lca5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0092019.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83196426 83257587 - MGP_WSBEiJ_P0092019 Lca5 protein_coding protein_coding MGP_WSBEiJ_T0092020.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83198496 83257487 - MGP_WSBEiJ_P0092020 Lca5 protein_coding protein_coding MGP_WSBEiJ_T0092021.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83208403 83209638 - Lca5 protein_coding retained_intron MGP_WSBEiJ_T0092022.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83230082 83257553 - Lca5 protein_coding retained_intron MGP_WSBEiJ_T0092023.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83231058 83244800 - MGP_WSBEiJ_P0092023 Lca5 protein_coding protein_coding MGP_WSBEiJ_T0092024.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83231263 83234847 - Lca5 protein_coding retained_intron MGP_WSBEiJ_T0092025.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83234626 83257576 - MGP_WSBEiJ_P0092025 Lca5 protein_coding protein_coding MGP_WSBEiJ_T0092026.1 MGP_WSBEiJ_G0034202.1 mouse_genomes_project 9 83234717 83257522 - Lca5 protein_coding processed_transcript MGP_WSBEiJ_T0090373.1 MGP_WSBEiJ_G0033682.1 mouse_genomes_project 9 34911128 34930286 + MGP_WSBEiJ_P0090373 Hepacam protein_coding protein_coding MGP_WSBEiJ_T0090583.1 MGP_WSBEiJ_G0033809.1 mouse_genomes_project 9 42176772 42184268 + MGP_WSBEiJ_P0090583 Mfrp protein_coding protein_coding MGP_WSBEiJ_T0090584.1 MGP_WSBEiJ_G0033809.1 mouse_genomes_project 9 42176781 42181563 + MGP_WSBEiJ_P0090584 Mfrp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090585.1 MGP_WSBEiJ_G0033809.1 mouse_genomes_project 9 42176797 42184265 + MGP_WSBEiJ_P0090585 Mfrp protein_coding protein_coding MGP_WSBEiJ_T0090586.1 MGP_WSBEiJ_G0033809.1 mouse_genomes_project 9 42176813 42184265 + MGP_WSBEiJ_P0090586 Mfrp protein_coding protein_coding MGP_WSBEiJ_T0090587.1 MGP_WSBEiJ_G0033809.1 mouse_genomes_project 9 42176831 42178341 + MGP_WSBEiJ_P0090587 Mfrp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090588.1 MGP_WSBEiJ_G0033809.1 mouse_genomes_project 9 42180219 42181465 + MGP_WSBEiJ_P0090588 Mfrp protein_coding protein_coding MGP_WSBEiJ_T0090936.1 MGP_WSBEiJ_G0033914.1 mouse_genomes_project 9 49483701 49506428 - MGP_WSBEiJ_P0090936 4833427G06Rik protein_coding protein_coding MGP_WSBEiJ_T0091987.1 MGP_WSBEiJ_G0034197.1 mouse_genomes_project 9 81389190 81394712 - MGP_WSBEiJ_P0091987 Htr1b protein_coding protein_coding MGP_WSBEiJ_T0091988.1 MGP_WSBEiJ_G0034197.1 mouse_genomes_project 9 81392226 81393499 - MGP_WSBEiJ_P0091988 Htr1b protein_coding protein_coding MGP_WSBEiJ_T0090072.1 MGP_WSBEiJ_G0033583.1 mouse_genomes_project 9 18791230 18793071 + MGP_WSBEiJ_P0090072 Angptl8 protein_coding protein_coding MGP_WSBEiJ_T0091616.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264430 69274800 + MGP_WSBEiJ_P0091616 Gtf2a2 protein_coding protein_coding MGP_WSBEiJ_T0091617.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264434 69274672 + Gtf2a2 protein_coding retained_intron MGP_WSBEiJ_T0091618.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264445 69274671 + MGP_WSBEiJ_P0091618 Gtf2a2 protein_coding protein_coding MGP_WSBEiJ_T0091619.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264446 69274672 + MGP_WSBEiJ_P0091619 Gtf2a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091620.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264448 69274449 + Gtf2a2 protein_coding processed_transcript MGP_WSBEiJ_T0091621.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264451 69270155 + Gtf2a2 protein_coding retained_intron MGP_WSBEiJ_T0091622.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264451 69274671 + MGP_WSBEiJ_P0091622 Gtf2a2 protein_coding protein_coding MGP_WSBEiJ_T0091623.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264454 69271408 + MGP_WSBEiJ_P0091623 Gtf2a2 protein_coding protein_coding MGP_WSBEiJ_T0091624.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264459 69271403 + Gtf2a2 protein_coding retained_intron MGP_WSBEiJ_T0091625.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264464 69267519 + Gtf2a2 protein_coding retained_intron MGP_WSBEiJ_T0091626.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264475 69271420 + MGP_WSBEiJ_P0091626 Gtf2a2 protein_coding protein_coding MGP_WSBEiJ_T0091627.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69264523 69274672 + MGP_WSBEiJ_P0091627 Gtf2a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091628.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69267692 69274671 + Gtf2a2 protein_coding processed_transcript MGP_WSBEiJ_T0091629.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69268699 69271844 + Gtf2a2 protein_coding retained_intron MGP_WSBEiJ_T0091630.1 MGP_WSBEiJ_G0034111.1 mouse_genomes_project 9 69270981 69274671 + Gtf2a2 protein_coding retained_intron MGP_WSBEiJ_T0092463.1 MGP_WSBEiJ_G0034299.1 mouse_genomes_project 9 102341743 102788580 - MGP_WSBEiJ_P0092463 Ephb1 protein_coding protein_coding MGP_WSBEiJ_T0092464.1 MGP_WSBEiJ_G0034299.1 mouse_genomes_project 9 102342186 102788580 - MGP_WSBEiJ_P0092464 Ephb1 protein_coding protein_coding MGP_WSBEiJ_T0092466.1 MGP_WSBEiJ_G0034299.1 mouse_genomes_project 9 102462167 102788580 - MGP_WSBEiJ_P0092466 Ephb1 protein_coding protein_coding MGP_WSBEiJ_T0093557.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112128031 112209847 + MGP_WSBEiJ_P0093557 Lrrfip2 protein_coding protein_coding MGP_WSBEiJ_T0093558.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112128550 112236711 + MGP_WSBEiJ_P0093558 Lrrfip2 protein_coding protein_coding MGP_WSBEiJ_T0093559.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112128552 112235265 + MGP_WSBEiJ_P0093559 Lrrfip2 protein_coding protein_coding MGP_WSBEiJ_T0093560.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112128574 112236711 + MGP_WSBEiJ_P0093560 Lrrfip2 protein_coding protein_coding MGP_WSBEiJ_T0093561.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112128627 112236713 + MGP_WSBEiJ_P0093561 Lrrfip2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0093562.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112128884 112235265 + MGP_WSBEiJ_P0093562 Lrrfip2 protein_coding protein_coding MGP_WSBEiJ_T0093563.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112130162 112235265 + MGP_WSBEiJ_P0093563 Lrrfip2 protein_coding protein_coding MGP_WSBEiJ_T0093565.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112195564 112225273 + MGP_WSBEiJ_P0093565 Lrrfip2 protein_coding protein_coding MGP_WSBEiJ_T0093566.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112203415 112236711 + Lrrfip2 protein_coding processed_transcript MGP_WSBEiJ_T0093567.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112209526 112215914 + Lrrfip2 protein_coding retained_intron MGP_WSBEiJ_T0093568.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112225266 112227553 + Lrrfip2 protein_coding retained_intron MGP_WSBEiJ_T0093569.1 MGP_WSBEiJ_G0034481.1 mouse_genomes_project 9 112230213 112234996 + Lrrfip2 protein_coding retained_intron MGP_WSBEiJ_T0002422.1 MGP_WSBEiJ_G0002338.1 mouse_genomes_project 9 110972611 110974236 + TEC TEC MGP_WSBEiJ_T0090101.1 MGP_WSBEiJ_G0033597.1 mouse_genomes_project 9 19097539 19098719 - MGP_WSBEiJ_P0090101 Elof1 protein_coding protein_coding MGP_WSBEiJ_T0090102.1 MGP_WSBEiJ_G0033597.1 mouse_genomes_project 9 19097540 19101786 - MGP_WSBEiJ_P0090102 Elof1 protein_coding protein_coding MGP_WSBEiJ_T0089994.1 MGP_WSBEiJ_G0033557.1 mouse_genomes_project 9 17950268 17956221 - MGP_WSBEiJ_P0089994 Zglp1 protein_coding protein_coding MGP_WSBEiJ_T0091454.1 MGP_WSBEiJ_G0034073.1 mouse_genomes_project 9 64415486 64418455 - MGP_WSBEiJ_P0091454 Kbtbd13 protein_coding protein_coding MGP_WSBEiJ_T0090484.1 MGP_WSBEiJ_G0033763.1 mouse_genomes_project 9 37547087 37548020 + MGP_WSBEiJ_P0090484 Olfr967 protein_coding protein_coding MGP_WSBEiJ_T0002361.1 MGP_WSBEiJ_G0002277.1 mouse_genomes_project 9 89142896 89143858 - TEC TEC MGP_WSBEiJ_T0093949.1 MGP_WSBEiJ_G0034597.1 mouse_genomes_project 9 125773509 125785367 + MGP_WSBEiJ_P0093949 Ccr3 protein_coding protein_coding MGP_WSBEiJ_T0091842.1 MGP_WSBEiJ_G0034155.1 mouse_genomes_project 9 74929380 74929911 - MGP_WSBEiJ_P0091842 A130057D12Rik protein_coding protein_coding MGP_WSBEiJ_T0090532.1 MGP_WSBEiJ_G0033790.1 mouse_genomes_project 9 38806307 38870765 - MGP_WSBEiJ_P0090532 Jhy protein_coding protein_coding MGP_WSBEiJ_T0090533.1 MGP_WSBEiJ_G0033790.1 mouse_genomes_project 9 38806309 38809084 - Jhy protein_coding retained_intron MGP_WSBEiJ_T0090534.1 MGP_WSBEiJ_G0033790.1 mouse_genomes_project 9 38866511 38867955 - MGP_WSBEiJ_P0090534 Jhy protein_coding protein_coding MGP_WSBEiJ_T0089919.1 MGP_WSBEiJ_G0033533.1 mouse_genomes_project 9 17149127 17153902 + MGP_WSBEiJ_P0089919 Olfr39 protein_coding protein_coding MGP_WSBEiJ_T0092362.1 MGP_WSBEiJ_G0034275.1 mouse_genomes_project 9 99125714 99127445 + MGP_WSBEiJ_P0092362 protein_coding protein_coding MGP_WSBEiJ_T0002409.1 MGP_WSBEiJ_G0002325.1 mouse_genomes_project 9 106716748 106719581 + TEC TEC MGP_WSBEiJ_T0010880.1 MGP_WSBEiJ_G0009037.1 mouse_genomes_project 9 50533197 50533288 - Gm27686 miRNA miRNA MGP_WSBEiJ_T0096870.1 MGP_WSBEiJ_G0035551.1 mouse_genomes_project 9 68037086 68037520 + pseudogene pseudogene MGP_WSBEiJ_T0091136.1 MGP_WSBEiJ_G0033983.1 mouse_genomes_project 9 56103264 56104612 + MGP_WSBEiJ_P0091136 Rpp25 protein_coding protein_coding MGP_WSBEiJ_T0098603.1 MGP_WSBEiJ_G0037266.1 mouse_genomes_project 9 61934860 61935018 + Gm24526 snRNA snRNA MGP_WSBEiJ_T0010878.1 MGP_WSBEiJ_G0009035.1 mouse_genomes_project 9 49507381 49507458 - Mir34c miRNA miRNA MGP_WSBEiJ_T0098601.1 MGP_WSBEiJ_G0037264.1 mouse_genomes_project 9 51225287 51225405 + Gm22242 snRNA snRNA MGP_WSBEiJ_T0011551.1 MGP_WSBEiJ_G0009708.1 mouse_genomes_project 9 122440061 122440382 - Gm23624 misc_RNA misc_RNA MGP_WSBEiJ_T0098627.1 MGP_WSBEiJ_G0037290.1 mouse_genomes_project 9 88482504 88482620 - Gm22985 snRNA snRNA MGP_WSBEiJ_T0092758.1 MGP_WSBEiJ_G0034356.1 mouse_genomes_project 9 107300625 107305670 - MGP_WSBEiJ_P0092758 Grm2 protein_coding protein_coding MGP_WSBEiJ_T0092759.1 MGP_WSBEiJ_G0034356.1 mouse_genomes_project 9 107300647 107313606 - MGP_WSBEiJ_P0092759 Grm2 protein_coding protein_coding MGP_WSBEiJ_T0092760.1 MGP_WSBEiJ_G0034356.1 mouse_genomes_project 9 107302421 107313608 - MGP_WSBEiJ_P0092760 Grm2 protein_coding protein_coding MGP_WSBEiJ_T0092761.1 MGP_WSBEiJ_G0034356.1 mouse_genomes_project 9 107302520 107304156 - Grm2 protein_coding processed_transcript MGP_WSBEiJ_T0091083.1 MGP_WSBEiJ_G0033966.1 mouse_genomes_project 9 54726397 54769493 - MGP_WSBEiJ_P0091083 Peak1 protein_coding protein_coding MGP_WSBEiJ_T0091084.1 MGP_WSBEiJ_G0033966.1 mouse_genomes_project 9 54730397 54947024 - MGP_WSBEiJ_P0091084 Peak1 protein_coding protein_coding MGP_WSBEiJ_T0091085.1 MGP_WSBEiJ_G0033966.1 mouse_genomes_project 9 54945654 54947007 - Peak1 protein_coding retained_intron MGP_WSBEiJ_T0090983.1 MGP_WSBEiJ_G0033932.1 mouse_genomes_project 9 52165138 52188461 - MGP_WSBEiJ_P0090983 Rab39 protein_coding protein_coding MGP_WSBEiJ_T0090457.1 MGP_WSBEiJ_G0033742.1 mouse_genomes_project 9 36697390 36698326 - MGP_WSBEiJ_P0090457 Olfr937 protein_coding protein_coding MGP_WSBEiJ_T0002393.1 MGP_WSBEiJ_G0002309.1 mouse_genomes_project 9 102409642 102410690 + TEC TEC MGP_WSBEiJ_T0096871.1 MGP_WSBEiJ_G0035552.1 mouse_genomes_project 9 110968720 110971899 + pseudogene pseudogene MGP_WSBEiJ_T0002421.1 MGP_WSBEiJ_G0002337.1 mouse_genomes_project 9 110935064 110936004 + TEC TEC MGP_WSBEiJ_T0091351.1 MGP_WSBEiJ_G0034041.1 mouse_genomes_project 9 61737301 61751748 + MGP_WSBEiJ_P0091351 Cln6 protein_coding protein_coding MGP_WSBEiJ_T0091352.1 MGP_WSBEiJ_G0034041.1 mouse_genomes_project 9 61737308 61745760 + MGP_WSBEiJ_P0091352 Cln6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091353.1 MGP_WSBEiJ_G0034041.1 mouse_genomes_project 9 61745756 61750453 + MGP_WSBEiJ_P0091353 Cln6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0091354.1 MGP_WSBEiJ_G0034041.1 mouse_genomes_project 9 61746774 61750904 + MGP_WSBEiJ_P0091354 Cln6 protein_coding protein_coding MGP_WSBEiJ_T0090279.1 MGP_WSBEiJ_G0033652.1 mouse_genomes_project 9 32611741 32662876 - MGP_WSBEiJ_P0090279 Fam118b protein_coding protein_coding MGP_WSBEiJ_T0090280.1 MGP_WSBEiJ_G0033652.1 mouse_genomes_project 9 32611796 32662901 - MGP_WSBEiJ_P0090280 Fam118b protein_coding protein_coding MGP_WSBEiJ_T0090281.1 MGP_WSBEiJ_G0033652.1 mouse_genomes_project 9 32611796 32662873 - MGP_WSBEiJ_P0090281 Fam118b protein_coding protein_coding MGP_WSBEiJ_T0090282.1 MGP_WSBEiJ_G0033652.1 mouse_genomes_project 9 32612011 32630419 - MGP_WSBEiJ_P0090282 Fam118b protein_coding protein_coding MGP_WSBEiJ_T0090283.1 MGP_WSBEiJ_G0033652.1 mouse_genomes_project 9 32616316 32662863 - MGP_WSBEiJ_P0090283 Fam118b protein_coding protein_coding MGP_WSBEiJ_T0090284.1 MGP_WSBEiJ_G0033652.1 mouse_genomes_project 9 32627037 32662876 - Fam118b protein_coding retained_intron MGP_WSBEiJ_T0090285.1 MGP_WSBEiJ_G0033652.1 mouse_genomes_project 9 32661442 32662876 - Fam118b protein_coding retained_intron MGP_WSBEiJ_T0002343.1 MGP_WSBEiJ_G0002260.1 mouse_genomes_project 9 75173251 75173939 + TEC TEC MGP_WSBEiJ_T0090430.1 MGP_WSBEiJ_G0033721.1 mouse_genomes_project 9 36130595 36131528 + MGP_WSBEiJ_P0090430 Olfr907 protein_coding protein_coding MGP_WSBEiJ_T0099822.1 MGP_WSBEiJ_G0038485.1 mouse_genomes_project 9 49700 49830 + Gm24918 snoRNA snoRNA MGP_WSBEiJ_T0015526.1 MGP_WSBEiJ_G0013656.1 mouse_genomes_project 9 39607252 39608233 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0090503.1 MGP_WSBEiJ_G0033782.1 mouse_genomes_project 9 38047899 38070111 + MGP_WSBEiJ_P0090503 Zfp202 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0090504.1 MGP_WSBEiJ_G0033782.1 mouse_genomes_project 9 38047900 38069696 + MGP_WSBEiJ_P0090504 Zfp202 protein_coding protein_coding MGP_WSBEiJ_T0090505.1 MGP_WSBEiJ_G0033782.1 mouse_genomes_project 9 38047912 38069696 + MGP_WSBEiJ_P0090505 Zfp202 protein_coding protein_coding MGP_WSBEiJ_T0011538.1 MGP_WSBEiJ_G0009695.1 mouse_genomes_project 9 60872623 60872716 + Gm23221 misc_RNA misc_RNA MGP_WSBEiJ_T0091330.1 MGP_WSBEiJ_G0034036.1 mouse_genomes_project 9 61138862 61150317 - MGP_WSBEiJ_P0091330 Spesp1 protein_coding protein_coding MGP_WSBEiJ_T0092781.1 MGP_WSBEiJ_G0034361.1 mouse_genomes_project 9 107562404 107568929 - MGP_WSBEiJ_P0092781 Rbm15b protein_coding protein_coding MGP_WSBEiJ_T0092782.1 MGP_WSBEiJ_G0034361.1 mouse_genomes_project 9 107566233 107567102 - MGP_WSBEiJ_P0092782 Rbm15b protein_coding protein_coding MGP_WSBEiJ_T0092339.1 MGP_WSBEiJ_G0034266.1 mouse_genomes_project 9 97567775 97589207 - MGP_WSBEiJ_P0092339 Trim42 protein_coding protein_coding MGP_WSBEiJ_T0002338.1 MGP_WSBEiJ_G0002255.1 mouse_genomes_project 9 72398795 72400069 - TEC TEC MGP_WSBEiJ_T0092156.1 MGP_WSBEiJ_G0034234.1 mouse_genomes_project 9 89866010 89871948 + MGP_WSBEiJ_P0092156 Rasgrf1 protein_coding protein_coding MGP_WSBEiJ_T0092157.1 MGP_WSBEiJ_G0034234.1 mouse_genomes_project 9 89866011 89987419 + MGP_WSBEiJ_P0092157 Rasgrf1 protein_coding protein_coding MGP_WSBEiJ_T0092158.1 MGP_WSBEiJ_G0034234.1 mouse_genomes_project 9 89866011 89871935 + MGP_WSBEiJ_P0092158 Rasgrf1 protein_coding protein_coding MGP_WSBEiJ_T0092159.1 MGP_WSBEiJ_G0034234.1 mouse_genomes_project 9 89866014 89884247 + Rasgrf1 protein_coding retained_intron MGP_WSBEiJ_T0091518.1 MGP_WSBEiJ_G0034090.1 mouse_genomes_project 9 65199652 65212569 + MGP_WSBEiJ_P0091518 Fam96a protein_coding protein_coding MGP_WSBEiJ_T0000319.1 MGP_WSBEiJ_G0000267.1 mouse_genomes_project 9 124864758 124864827 + mt-Ta Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0005347.1 MGP_WSBEiJ_G0004527.1 mouse_genomes_project 9 30074554 30076076 - Gm27240 antisense antisense MGP_WSBEiJ_T0003249.1 MGP_WSBEiJ_G0003005.1 mouse_genomes_project 11 109633716 109641981 + Gm11716 antisense antisense MGP_WSBEiJ_T0012228.1 MGP_WSBEiJ_G0010358.1 mouse_genomes_project 11 8423670 8424500 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006080.1 MGP_WSBEiJ_G0005076.1 mouse_genomes_project 11 1159132 1160612 + Gm11958 lincRNA lincRNA MGP_WSBEiJ_T0031460.1 MGP_WSBEiJ_G0018449.1 mouse_genomes_project 11 101121625 101125735 - MGP_WSBEiJ_P0031460 Krt10 protein_coding protein_coding MGP_WSBEiJ_T0032804.1 MGP_WSBEiJ_G0018772.1 mouse_genomes_project 11 119019246 119026290 - MGP_WSBEiJ_P0032804 Mrpl38 protein_coding protein_coding MGP_WSBEiJ_T0032805.1 MGP_WSBEiJ_G0018772.1 mouse_genomes_project 11 119019250 119026197 - Mrpl38 protein_coding retained_intron MGP_WSBEiJ_T0032806.1 MGP_WSBEiJ_G0018772.1 mouse_genomes_project 11 119020214 119026211 - Mrpl38 protein_coding retained_intron MGP_WSBEiJ_T0032807.1 MGP_WSBEiJ_G0018772.1 mouse_genomes_project 11 119021491 119021886 - Mrpl38 protein_coding retained_intron MGP_WSBEiJ_T0032808.1 MGP_WSBEiJ_G0018772.1 mouse_genomes_project 11 119021685 119022057 - Mrpl38 protein_coding retained_intron MGP_WSBEiJ_T0032809.1 MGP_WSBEiJ_G0018772.1 mouse_genomes_project 11 119025203 119026287 - Mrpl38 protein_coding retained_intron MGP_WSBEiJ_T0012307.1 MGP_WSBEiJ_G0010437.1 mouse_genomes_project 11 36226184 36227277 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012222.1 MGP_WSBEiJ_G0010352.1 mouse_genomes_project 11 3797269 3800755 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027490.1 MGP_WSBEiJ_G0017452.1 mouse_genomes_project 11 20343911 20347217 + MGP_WSBEiJ_P0027490 Zrsr1 protein_coding protein_coding MGP_WSBEiJ_T0027398.1 MGP_WSBEiJ_G0017429.1 mouse_genomes_project 11 14447771 14453103 + C1d protein_coding processed_transcript MGP_WSBEiJ_T0027399.1 MGP_WSBEiJ_G0017429.1 mouse_genomes_project 11 14447784 14454487 + C1d protein_coding processed_transcript MGP_WSBEiJ_T0027400.1 MGP_WSBEiJ_G0017429.1 mouse_genomes_project 11 14447786 14459369 + MGP_WSBEiJ_P0027400 C1d protein_coding protein_coding MGP_WSBEiJ_T0027401.1 MGP_WSBEiJ_G0017429.1 mouse_genomes_project 11 14447880 14456817 + MGP_WSBEiJ_P0027401 C1d protein_coding protein_coding MGP_WSBEiJ_T0027402.1 MGP_WSBEiJ_G0017429.1 mouse_genomes_project 11 14453813 14456753 + C1d protein_coding processed_transcript MGP_WSBEiJ_T0030520.1 MGP_WSBEiJ_G0018218.1 mouse_genomes_project 11 84388727 84391005 + MGP_WSBEiJ_P0030520 Wfdc17 protein_coding protein_coding MGP_WSBEiJ_T0030023.1 MGP_WSBEiJ_G0018094.1 mouse_genomes_project 11 76626453 76634173 + MGP_WSBEiJ_P0030023 Timm22 protein_coding protein_coding MGP_WSBEiJ_T0030024.1 MGP_WSBEiJ_G0018094.1 mouse_genomes_project 11 76626644 76636136 + MGP_WSBEiJ_P0030024 Timm22 protein_coding protein_coding MGP_WSBEiJ_T0030025.1 MGP_WSBEiJ_G0018094.1 mouse_genomes_project 11 76626692 76633926 + MGP_WSBEiJ_P0030025 Timm22 protein_coding protein_coding MGP_WSBEiJ_T0030026.1 MGP_WSBEiJ_G0018094.1 mouse_genomes_project 11 76626706 76629655 + MGP_WSBEiJ_P0030026 Timm22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030780.1 MGP_WSBEiJ_G0018277.1 mouse_genomes_project 11 88903768 88911558 - MGP_WSBEiJ_P0030780 Dynll2 protein_coding protein_coding MGP_WSBEiJ_T0030781.1 MGP_WSBEiJ_G0018277.1 mouse_genomes_project 11 88903768 88908056 - MGP_WSBEiJ_P0030781 Dynll2 protein_coding protein_coding MGP_WSBEiJ_T0030782.1 MGP_WSBEiJ_G0018277.1 mouse_genomes_project 11 88903768 88910609 - MGP_WSBEiJ_P0030782 Dynll2 protein_coding protein_coding MGP_WSBEiJ_T0030783.1 MGP_WSBEiJ_G0018277.1 mouse_genomes_project 11 88904400 88911381 - MGP_WSBEiJ_P0030783 Dynll2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029062.1 MGP_WSBEiJ_G0017865.1 mouse_genomes_project 11 68216030 68227504 + MGP_WSBEiJ_P0029062 Ccdc42 protein_coding protein_coding MGP_WSBEiJ_T0029063.1 MGP_WSBEiJ_G0017865.1 mouse_genomes_project 11 68222845 68227765 + MGP_WSBEiJ_P0029063 Ccdc42 protein_coding protein_coding MGP_WSBEiJ_T0030894.1 MGP_WSBEiJ_G0018307.1 mouse_genomes_project 11 95129602 95143027 - MGP_WSBEiJ_P0030894 Nme1 protein_coding protein_coding MGP_WSBEiJ_T0030895.1 MGP_WSBEiJ_G0018307.1 mouse_genomes_project 11 95132095 95139064 - MGP_WSBEiJ_P0030895 Nme1 protein_coding protein_coding MGP_WSBEiJ_T0030896.1 MGP_WSBEiJ_G0018307.1 mouse_genomes_project 11 95133291 95142778 - MGP_WSBEiJ_P0030896 Nme1 protein_coding protein_coding MGP_WSBEiJ_T0006290.1 MGP_WSBEiJ_G0005243.1 mouse_genomes_project 11 123816990 123818348 + Gm17586 lincRNA lincRNA MGP_WSBEiJ_T0032722.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118684984 118723150 + MGP_WSBEiJ_P0032722 Llgl2 protein_coding protein_coding MGP_WSBEiJ_T0032723.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118684993 118723148 + MGP_WSBEiJ_P0032723 Llgl2 protein_coding protein_coding MGP_WSBEiJ_T0032724.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118684993 118708674 + MGP_WSBEiJ_P0032724 Llgl2 protein_coding protein_coding MGP_WSBEiJ_T0032725.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118692950 118708116 + MGP_WSBEiJ_P0032725 Llgl2 protein_coding protein_coding MGP_WSBEiJ_T0032726.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118694907 118708621 + MGP_WSBEiJ_P0032726 Llgl2 protein_coding protein_coding MGP_WSBEiJ_T0032727.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118695296 118708681 + MGP_WSBEiJ_P0032727 Llgl2 protein_coding protein_coding MGP_WSBEiJ_T0032728.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118695305 118708709 + MGP_WSBEiJ_P0032728 Llgl2 protein_coding protein_coding MGP_WSBEiJ_T0032729.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118720621 118721689 + Llgl2 protein_coding retained_intron MGP_WSBEiJ_T0032730.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118721105 118722228 + Llgl2 protein_coding processed_transcript MGP_WSBEiJ_T0032731.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118721172 118723150 + MGP_WSBEiJ_P0032731 Llgl2 protein_coding protein_coding MGP_WSBEiJ_T0032732.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118721601 118722954 + Llgl2 protein_coding retained_intron MGP_WSBEiJ_T0032733.1 MGP_WSBEiJ_G0018758.1 mouse_genomes_project 11 118722402 118723150 + Llgl2 protein_coding retained_intron MGP_WSBEiJ_T0003167.1 MGP_WSBEiJ_G0002941.1 mouse_genomes_project 11 81920461 81937921 + 4930527B05Rik antisense antisense MGP_WSBEiJ_T0031359.1 MGP_WSBEiJ_G0018422.1 mouse_genomes_project 11 100161034 100168636 + MGP_WSBEiJ_P0031359 Zpbp2 protein_coding protein_coding MGP_WSBEiJ_T0031360.1 MGP_WSBEiJ_G0018422.1 mouse_genomes_project 11 100161067 100168636 + MGP_WSBEiJ_P0031360 Zpbp2 protein_coding protein_coding MGP_WSBEiJ_T0031361.1 MGP_WSBEiJ_G0018422.1 mouse_genomes_project 11 100161087 100168627 + MGP_WSBEiJ_P0031361 Zpbp2 protein_coding protein_coding MGP_WSBEiJ_T0031362.1 MGP_WSBEiJ_G0018422.1 mouse_genomes_project 11 100161089 100168627 + MGP_WSBEiJ_P0031362 Zpbp2 protein_coding protein_coding MGP_WSBEiJ_T0031363.1 MGP_WSBEiJ_G0018422.1 mouse_genomes_project 11 100161115 100168504 + MGP_WSBEiJ_P0031363 Zpbp2 protein_coding protein_coding MGP_WSBEiJ_T0031364.1 MGP_WSBEiJ_G0018422.1 mouse_genomes_project 11 100165412 100168356 + Zpbp2 protein_coding processed_transcript MGP_WSBEiJ_T0096910.1 MGP_WSBEiJ_G0035591.1 mouse_genomes_project 11 49353432 49353545 + Gm23392 rRNA rRNA MGP_WSBEiJ_T0100221.1 MGP_WSBEiJ_G0038772.1 mouse_genomes_project 11 74305660 74317206 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100222.1 MGP_WSBEiJ_G0038772.1 mouse_genomes_project 11 74306135 74307071 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0030351.1 MGP_WSBEiJ_G0018166.1 mouse_genomes_project 11 80537629 80587348 + MGP_WSBEiJ_P0030351 Atad5 protein_coding protein_coding MGP_WSBEiJ_T0030352.1 MGP_WSBEiJ_G0018166.1 mouse_genomes_project 11 80537629 80587351 + MGP_WSBEiJ_P0030352 Atad5 protein_coding protein_coding MGP_WSBEiJ_T0030353.1 MGP_WSBEiJ_G0018166.1 mouse_genomes_project 11 80550057 80587351 + Atad5 protein_coding processed_transcript MGP_WSBEiJ_T0030354.1 MGP_WSBEiJ_G0018166.1 mouse_genomes_project 11 80551177 80556696 + Atad5 protein_coding retained_intron MGP_WSBEiJ_T0028371.1 MGP_WSBEiJ_G0017679.1 mouse_genomes_project 11 53181437 53235565 + Meikin protein_coding retained_intron MGP_WSBEiJ_T0028372.1 MGP_WSBEiJ_G0017679.1 mouse_genomes_project 11 53181437 53235600 + MGP_WSBEiJ_P0028372 Meikin protein_coding protein_coding MGP_WSBEiJ_T0096763.1 MGP_WSBEiJ_G0035444.1 mouse_genomes_project 11 58376957 58377435 - pseudogene pseudogene MGP_WSBEiJ_T0028173.1 MGP_WSBEiJ_G0017630.1 mouse_genomes_project 11 49888415 50205108 + MGP_WSBEiJ_P0028173 Col23a1 protein_coding protein_coding MGP_WSBEiJ_T0028174.1 MGP_WSBEiJ_G0017630.1 mouse_genomes_project 11 49888622 50198872 + MGP_WSBEiJ_P0028174 Col23a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028175.1 MGP_WSBEiJ_G0017630.1 mouse_genomes_project 11 50194193 50201489 + MGP_WSBEiJ_P0028175 Col23a1 protein_coding protein_coding MGP_WSBEiJ_T0033062.1 MGP_WSBEiJ_G0018823.1 mouse_genomes_project 11 121488272 121507882 + MGP_WSBEiJ_P0033062 C1qtnf1 protein_coding protein_coding MGP_WSBEiJ_T0033063.1 MGP_WSBEiJ_G0018823.1 mouse_genomes_project 11 121488554 121514017 + MGP_WSBEiJ_P0033063 C1qtnf1 protein_coding protein_coding MGP_WSBEiJ_T0033064.1 MGP_WSBEiJ_G0018823.1 mouse_genomes_project 11 121493890 121514017 + MGP_WSBEiJ_P0033064 C1qtnf1 protein_coding protein_coding MGP_WSBEiJ_T0033065.1 MGP_WSBEiJ_G0018823.1 mouse_genomes_project 11 121507519 121507889 + MGP_WSBEiJ_P0033065 C1qtnf1 protein_coding protein_coding MGP_WSBEiJ_T0027030.1 MGP_WSBEiJ_G0017344.1 mouse_genomes_project 11 965231 991335 - MGP_WSBEiJ_P0027030 Sec14l2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0027031.1 MGP_WSBEiJ_G0017344.1 mouse_genomes_project 11 965968 986535 - Sec14l2 protein_coding processed_transcript MGP_WSBEiJ_T0027032.1 MGP_WSBEiJ_G0017344.1 mouse_genomes_project 11 965968 977094 - Sec14l2 protein_coding processed_transcript MGP_WSBEiJ_T0027033.1 MGP_WSBEiJ_G0017344.1 mouse_genomes_project 11 971359 976853 - Sec14l2 protein_coding processed_transcript MGP_WSBEiJ_T0027034.1 MGP_WSBEiJ_G0017344.1 mouse_genomes_project 11 978979 991254 - Sec14l2 protein_coding processed_transcript MGP_WSBEiJ_T0027035.1 MGP_WSBEiJ_G0017344.1 mouse_genomes_project 11 984295 986592 - Sec14l2 protein_coding processed_transcript MGP_WSBEiJ_T0031152.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98362733 98373017 - MGP_WSBEiJ_P0031152 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031153.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98362733 98373017 - MGP_WSBEiJ_P0031153 Cdk5rap3 protein_coding protein_coding MGP_WSBEiJ_T0031154.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98363123 98364066 - Cdk5rap3 protein_coding retained_intron MGP_WSBEiJ_T0031155.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98366760 98368174 - Cdk5rap3 protein_coding retained_intron MGP_WSBEiJ_T0031156.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98367249 98372913 - MGP_WSBEiJ_P0031156 Cdk5rap3 protein_coding protein_coding MGP_WSBEiJ_T0031157.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98367266 98372628 - MGP_WSBEiJ_P0031157 Cdk5rap3 protein_coding protein_coding MGP_WSBEiJ_T0031158.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98367288 98372950 - MGP_WSBEiJ_P0031158 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031159.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98367521 98372887 - MGP_WSBEiJ_P0031159 Cdk5rap3 protein_coding protein_coding MGP_WSBEiJ_T0031160.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98367542 98372935 - MGP_WSBEiJ_P0031160 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031161.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98367652 98372935 - MGP_WSBEiJ_P0031161 Cdk5rap3 protein_coding protein_coding MGP_WSBEiJ_T0031162.1 MGP_WSBEiJ_G0018373.1 mouse_genomes_project 11 98367989 98372888 - Cdk5rap3 protein_coding retained_intron MGP_WSBEiJ_T0009564.1 MGP_WSBEiJ_G0007721.1 mouse_genomes_project 11 75305807 75305873 + Mir132 miRNA miRNA MGP_WSBEiJ_T0029803.1 MGP_WSBEiJ_G0018032.1 mouse_genomes_project 11 73771878 73802291 + protein_coding processed_transcript MGP_WSBEiJ_T0029804.1 MGP_WSBEiJ_G0018032.1 mouse_genomes_project 11 73777631 73802223 + protein_coding processed_transcript MGP_WSBEiJ_T0009501.1 MGP_WSBEiJ_G0007658.1 mouse_genomes_project 11 1007993 1008076 + Mir3060 miRNA miRNA MGP_WSBEiJ_T0016667.1 MGP_WSBEiJ_G0014632.1 mouse_genomes_project 11 109851797 109871220 - A830035A12Rik processed_transcript processed_transcript MGP_WSBEiJ_T0003056.1 MGP_WSBEiJ_G0002845.1 mouse_genomes_project 11 15165293 15169669 + Etaa1os antisense antisense MGP_WSBEiJ_T0012444.1 MGP_WSBEiJ_G0010574.1 mouse_genomes_project 11 93873081 93874181 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012414.1 MGP_WSBEiJ_G0010544.1 mouse_genomes_project 11 79075876 79076900 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016607.1 MGP_WSBEiJ_G0014595.1 mouse_genomes_project 11 66544606 66555630 + Gm12299 processed_transcript processed_transcript MGP_WSBEiJ_T0027787.1 MGP_WSBEiJ_G0017521.1 mouse_genomes_project 11 32692056 32717598 - MGP_WSBEiJ_P0027787 Spdl1 protein_coding protein_coding MGP_WSBEiJ_T0027788.1 MGP_WSBEiJ_G0017521.1 mouse_genomes_project 11 32704879 32706782 - Spdl1 protein_coding retained_intron MGP_WSBEiJ_T0027789.1 MGP_WSBEiJ_G0017521.1 mouse_genomes_project 11 32713111 32717549 - Spdl1 protein_coding retained_intron MGP_WSBEiJ_T0027712.1 MGP_WSBEiJ_G0017500.1 mouse_genomes_project 11 29966319 29971834 + MGP_WSBEiJ_P0027712 Mpg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027713.1 MGP_WSBEiJ_G0017500.1 mouse_genomes_project 11 29966325 29972512 + MGP_WSBEiJ_P0027713 Mpg protein_coding protein_coding MGP_WSBEiJ_T0027714.1 MGP_WSBEiJ_G0017500.1 mouse_genomes_project 11 29966344 29968209 + Mpg protein_coding retained_intron MGP_WSBEiJ_T0027715.1 MGP_WSBEiJ_G0017500.1 mouse_genomes_project 11 29966353 29971056 + MGP_WSBEiJ_P0027715 Mpg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027665.1 MGP_WSBEiJ_G0017487.1 mouse_genomes_project 11 28591712 28808264 + MGP_WSBEiJ_P0027665 Asb3 protein_coding protein_coding MGP_WSBEiJ_T0027670.1 MGP_WSBEiJ_G0017487.1 mouse_genomes_project 11 28666731 28809634 + MGP_WSBEiJ_P0027670 Asb3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027671.1 MGP_WSBEiJ_G0017487.1 mouse_genomes_project 11 28666744 28793027 + MGP_WSBEiJ_P0027671 Asb3 protein_coding protein_coding MGP_WSBEiJ_T0027672.1 MGP_WSBEiJ_G0017487.1 mouse_genomes_project 11 28666773 28750217 + Asb3 protein_coding retained_intron MGP_WSBEiJ_T0027675.1 MGP_WSBEiJ_G0017487.1 mouse_genomes_project 11 28712206 28812300 + MGP_WSBEiJ_P0027675 Asb3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0027676.1 MGP_WSBEiJ_G0017487.1 mouse_genomes_project 11 28766012 28770784 + Asb3 protein_coding retained_intron MGP_WSBEiJ_T0012362.1 MGP_WSBEiJ_G0010492.1 mouse_genomes_project 11 58771829 58772478 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031866.1 MGP_WSBEiJ_G0018578.1 mouse_genomes_project 11 104147499 104171232 - MGP_WSBEiJ_P0031866 Lsm12 protein_coding protein_coding MGP_WSBEiJ_T0031867.1 MGP_WSBEiJ_G0018578.1 mouse_genomes_project 11 104148955 104152200 - Lsm12 protein_coding processed_transcript MGP_WSBEiJ_T0009511.1 MGP_WSBEiJ_G0007668.1 mouse_genomes_project 11 23685740 23685849 + Mir6372 miRNA miRNA MGP_WSBEiJ_T0003144.1 MGP_WSBEiJ_G0002921.1 mouse_genomes_project 11 69028924 69030251 + Cntrobos antisense antisense MGP_WSBEiJ_T0009533.1 MGP_WSBEiJ_G0007690.1 mouse_genomes_project 11 53472856 53472933 - Gm26116 miRNA miRNA MGP_WSBEiJ_T0009512.1 MGP_WSBEiJ_G0007669.1 mouse_genomes_project 11 26397683 26397769 + Mir216b miRNA miRNA MGP_WSBEiJ_T0012224.1 MGP_WSBEiJ_G0010354.1 mouse_genomes_project 11 3871318 3872084 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012457.1 MGP_WSBEiJ_G0010587.1 mouse_genomes_project 11 99509505 99509949 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012333.1 MGP_WSBEiJ_G0010463.1 mouse_genomes_project 11 48293300 48293679 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032163.1 MGP_WSBEiJ_G0018635.1 mouse_genomes_project 11 107083746 107284362 + MGP_WSBEiJ_P0032163 Efcab3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0032164.1 MGP_WSBEiJ_G0018635.1 mouse_genomes_project 11 107228272 107254600 + MGP_WSBEiJ_P0032164 Efcab3 protein_coding protein_coding MGP_WSBEiJ_T0032165.1 MGP_WSBEiJ_G0018635.1 mouse_genomes_project 11 107231495 107272203 + MGP_WSBEiJ_P0032165 Efcab3 protein_coding protein_coding MGP_WSBEiJ_T0032166.1 MGP_WSBEiJ_G0018635.1 mouse_genomes_project 11 107257729 107284355 + MGP_WSBEiJ_P0032166 Efcab3 protein_coding protein_coding MGP_WSBEiJ_T0032167.1 MGP_WSBEiJ_G0018635.1 mouse_genomes_project 11 107280079 107284353 + Efcab3 protein_coding processed_transcript MGP_WSBEiJ_T0031906.1 MGP_WSBEiJ_G0018584.1 mouse_genomes_project 11 104283114 104288818 - MGP_WSBEiJ_P0031906 Atxn7l3 protein_coding protein_coding MGP_WSBEiJ_T0031907.1 MGP_WSBEiJ_G0018584.1 mouse_genomes_project 11 104283118 104287263 - Atxn7l3 protein_coding retained_intron MGP_WSBEiJ_T0031908.1 MGP_WSBEiJ_G0018584.1 mouse_genomes_project 11 104283118 104289131 - MGP_WSBEiJ_P0031908 Atxn7l3 protein_coding protein_coding MGP_WSBEiJ_T0031909.1 MGP_WSBEiJ_G0018584.1 mouse_genomes_project 11 104283118 104291682 - MGP_WSBEiJ_P0031909 Atxn7l3 protein_coding protein_coding MGP_WSBEiJ_T0031910.1 MGP_WSBEiJ_G0018584.1 mouse_genomes_project 11 104283118 104288806 - MGP_WSBEiJ_P0031910 Atxn7l3 protein_coding protein_coding MGP_WSBEiJ_T0031911.1 MGP_WSBEiJ_G0018584.1 mouse_genomes_project 11 104283119 104291680 - MGP_WSBEiJ_P0031911 Atxn7l3 protein_coding protein_coding MGP_WSBEiJ_T0006253.1 MGP_WSBEiJ_G0005214.1 mouse_genomes_project 11 112029261 112055532 + Gm11685 lincRNA lincRNA MGP_WSBEiJ_T0031472.1 MGP_WSBEiJ_G0018459.1 mouse_genomes_project 11 101320821 101321861 - MGP_WSBEiJ_P0031472 Krtap1-5 protein_coding protein_coding MGP_WSBEiJ_T0028235.1 MGP_WSBEiJ_G0017645.1 mouse_genomes_project 11 50878809 50893170 + MGP_WSBEiJ_P0028235 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028236.1 MGP_WSBEiJ_G0017645.1 mouse_genomes_project 11 50878851 50886493 + protein_coding retained_intron MGP_WSBEiJ_T0028237.1 MGP_WSBEiJ_G0017645.1 mouse_genomes_project 11 50878851 50893173 + MGP_WSBEiJ_P0028237 protein_coding protein_coding MGP_WSBEiJ_T0028238.1 MGP_WSBEiJ_G0017645.1 mouse_genomes_project 11 50884905 50894099 + MGP_WSBEiJ_P0028238 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028239.1 MGP_WSBEiJ_G0017645.1 mouse_genomes_project 11 50884932 50894081 + MGP_WSBEiJ_P0028239 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0016543.1 MGP_WSBEiJ_G0014562.1 mouse_genomes_project 11 110815 137113 - Gm12592 processed_transcript processed_transcript MGP_WSBEiJ_T0029834.1 MGP_WSBEiJ_G0018052.1 mouse_genomes_project 11 74444657 74445706 - MGP_WSBEiJ_P0029834 protein_coding protein_coding MGP_WSBEiJ_T0029835.1 MGP_WSBEiJ_G0018052.1 mouse_genomes_project 11 74444925 74450646 - MGP_WSBEiJ_P0029835 protein_coding protein_coding MGP_WSBEiJ_T0029163.1 MGP_WSBEiJ_G0017885.1 mouse_genomes_project 11 68869855 68923005 - MGP_WSBEiJ_P0029163 Alox8 protein_coding protein_coding MGP_WSBEiJ_T0029164.1 MGP_WSBEiJ_G0017885.1 mouse_genomes_project 11 68871013 68922971 - MGP_WSBEiJ_P0029164 Alox8 protein_coding protein_coding MGP_WSBEiJ_T0029165.1 MGP_WSBEiJ_G0017885.1 mouse_genomes_project 11 68875686 68922973 - Alox8 protein_coding retained_intron MGP_WSBEiJ_T0029166.1 MGP_WSBEiJ_G0017885.1 mouse_genomes_project 11 68877355 68922546 - Alox8 protein_coding retained_intron MGP_WSBEiJ_T0100496.1 MGP_WSBEiJ_G0038955.1 mouse_genomes_project 11 101437814 101437937 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0030984.1 MGP_WSBEiJ_G0018325.1 mouse_genomes_project 11 95895054 95908719 - MGP_WSBEiJ_P0030984 Xylt2 protein_coding protein_coding MGP_WSBEiJ_T0030985.1 MGP_WSBEiJ_G0018325.1 mouse_genomes_project 11 95895790 95908719 - MGP_WSBEiJ_P0030985 Xylt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030986.1 MGP_WSBEiJ_G0018325.1 mouse_genomes_project 11 95897430 95899396 - MGP_WSBEiJ_P0030986 Xylt2 protein_coding protein_coding MGP_WSBEiJ_T0030987.1 MGP_WSBEiJ_G0018325.1 mouse_genomes_project 11 95898074 95899006 - Xylt2 protein_coding retained_intron MGP_WSBEiJ_T0030988.1 MGP_WSBEiJ_G0018325.1 mouse_genomes_project 11 95899730 95908611 - MGP_WSBEiJ_P0030988 Xylt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030989.1 MGP_WSBEiJ_G0018325.1 mouse_genomes_project 11 95907166 95908617 - Xylt2 protein_coding processed_transcript MGP_WSBEiJ_T0028253.1 MGP_WSBEiJ_G0017650.1 mouse_genomes_project 11 51968914 52011833 - MGP_WSBEiJ_P0028253 Hspa4 protein_coding protein_coding MGP_WSBEiJ_T0028254.1 MGP_WSBEiJ_G0017650.1 mouse_genomes_project 11 51971931 51977675 - Hspa4 protein_coding retained_intron MGP_WSBEiJ_T0028255.1 MGP_WSBEiJ_G0017650.1 mouse_genomes_project 11 51974681 52011787 - Hspa4 protein_coding processed_transcript MGP_WSBEiJ_T0032228.1 MGP_WSBEiJ_G0018651.1 mouse_genomes_project 11 108366436 108409461 - Strada protein_coding processed_transcript MGP_WSBEiJ_T0032229.1 MGP_WSBEiJ_G0018651.1 mouse_genomes_project 11 108366457 108399190 - MGP_WSBEiJ_P0032229 Strada protein_coding protein_coding MGP_WSBEiJ_T0032230.1 MGP_WSBEiJ_G0018651.1 mouse_genomes_project 11 108366954 108399216 - MGP_WSBEiJ_P0032230 Strada protein_coding protein_coding MGP_WSBEiJ_T0032231.1 MGP_WSBEiJ_G0018651.1 mouse_genomes_project 11 108371581 108399193 - MGP_WSBEiJ_P0032231 Strada protein_coding protein_coding MGP_WSBEiJ_T0032232.1 MGP_WSBEiJ_G0018651.1 mouse_genomes_project 11 108388515 108399226 - MGP_WSBEiJ_P0032232 Strada protein_coding protein_coding MGP_WSBEiJ_T0006228.1 MGP_WSBEiJ_G0005195.1 mouse_genomes_project 11 96559759 96562095 - Gm11515 lincRNA lincRNA MGP_WSBEiJ_T0030771.1 MGP_WSBEiJ_G0018274.1 mouse_genomes_project 11 88752279 88762900 + MGP_WSBEiJ_P0030771 Mks1 protein_coding protein_coding MGP_WSBEiJ_T0030772.1 MGP_WSBEiJ_G0018274.1 mouse_genomes_project 11 88752291 88758403 + Mks1 protein_coding retained_intron MGP_WSBEiJ_T0030773.1 MGP_WSBEiJ_G0018274.1 mouse_genomes_project 11 88752739 88758403 + Mks1 protein_coding retained_intron MGP_WSBEiJ_T0030774.1 MGP_WSBEiJ_G0018274.1 mouse_genomes_project 11 88755641 88756376 + Mks1 protein_coding retained_intron MGP_WSBEiJ_T0030775.1 MGP_WSBEiJ_G0018274.1 mouse_genomes_project 11 88761028 88762358 + Mks1 protein_coding retained_intron MGP_WSBEiJ_T0097723.1 MGP_WSBEiJ_G0036386.1 mouse_genomes_project 11 88287186 88287350 + Gm22068 snRNA snRNA MGP_WSBEiJ_T0029978.1 MGP_WSBEiJ_G0018083.1 mouse_genomes_project 11 75947486 75975872 - MGP_WSBEiJ_P0029978 Doc2b protein_coding protein_coding MGP_WSBEiJ_T0031557.1 MGP_WSBEiJ_G0018510.1 mouse_genomes_project 11 102266282 102282459 + MGP_WSBEiJ_P0031557 Klhl10 protein_coding protein_coding MGP_WSBEiJ_T0031558.1 MGP_WSBEiJ_G0018510.1 mouse_genomes_project 11 102266292 102270384 + MGP_WSBEiJ_P0031558 Klhl10 protein_coding protein_coding MGP_WSBEiJ_T0030213.1 MGP_WSBEiJ_G0018131.1 mouse_genomes_project 11 78568923 78579502 + MGP_WSBEiJ_P0030213 Sdf2 protein_coding protein_coding MGP_WSBEiJ_T0030214.1 MGP_WSBEiJ_G0018131.1 mouse_genomes_project 11 78574468 78579502 + Sdf2 protein_coding processed_transcript MGP_WSBEiJ_T0030215.1 MGP_WSBEiJ_G0018131.1 mouse_genomes_project 11 78574941 78579123 + Sdf2 protein_coding retained_intron MGP_WSBEiJ_T0030419.1 MGP_WSBEiJ_G0018186.1 mouse_genomes_project 11 82700508 82702123 + MGP_WSBEiJ_P0030419 Ccl8 protein_coding protein_coding MGP_WSBEiJ_T0029928.1 MGP_WSBEiJ_G0018074.1 mouse_genomes_project 11 75641032 75665429 + MGP_WSBEiJ_P0029928 Prpf8 protein_coding protein_coding MGP_WSBEiJ_T0029929.1 MGP_WSBEiJ_G0018074.1 mouse_genomes_project 11 75641036 75665431 + MGP_WSBEiJ_P0029929 Prpf8 protein_coding protein_coding MGP_WSBEiJ_T0029930.1 MGP_WSBEiJ_G0018074.1 mouse_genomes_project 11 75641071 75650036 + MGP_WSBEiJ_P0029930 Prpf8 protein_coding protein_coding MGP_WSBEiJ_T0029931.1 MGP_WSBEiJ_G0018074.1 mouse_genomes_project 11 75646467 75648155 + Prpf8 protein_coding retained_intron MGP_WSBEiJ_T0029473.1 MGP_WSBEiJ_G0017953.1 mouse_genomes_project 11 70117203 70124233 - MGP_WSBEiJ_P0029473 Alox12e protein_coding protein_coding MGP_WSBEiJ_T0029474.1 MGP_WSBEiJ_G0017953.1 mouse_genomes_project 11 70121575 70123182 - Alox12e protein_coding retained_intron MGP_WSBEiJ_T0029475.1 MGP_WSBEiJ_G0017953.1 mouse_genomes_project 11 70122598 70123459 - Alox12e protein_coding retained_intron MGP_WSBEiJ_T0029476.1 MGP_WSBEiJ_G0017953.1 mouse_genomes_project 11 70122659 70124053 - Alox12e protein_coding retained_intron MGP_WSBEiJ_T0030018.1 MGP_WSBEiJ_G0018092.1 mouse_genomes_project 11 76453685 76460509 + MGP_WSBEiJ_P0030018 Rnmtl1 protein_coding protein_coding MGP_WSBEiJ_T0030019.1 MGP_WSBEiJ_G0018092.1 mouse_genomes_project 11 76453706 76454853 + Rnmtl1 protein_coding retained_intron MGP_WSBEiJ_T0030020.1 MGP_WSBEiJ_G0018092.1 mouse_genomes_project 11 76459101 76460398 + Rnmtl1 protein_coding processed_transcript MGP_WSBEiJ_T0100469.1 MGP_WSBEiJ_G0038928.1 mouse_genomes_project 11 51556907 51557031 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0031521.1 MGP_WSBEiJ_G0018500.1 mouse_genomes_project 11 102059927 102062667 - MGP_WSBEiJ_P0031521 Krt16 protein_coding protein_coding MGP_WSBEiJ_T0028525.1 MGP_WSBEiJ_G0017737.1 mouse_genomes_project 11 57879882 57883949 + MGP_WSBEiJ_P0028525 Olfr314 protein_coding protein_coding MGP_WSBEiJ_T0028526.1 MGP_WSBEiJ_G0017737.1 mouse_genomes_project 11 57883067 57884198 + MGP_WSBEiJ_P0028526 Olfr314 protein_coding protein_coding MGP_WSBEiJ_T0016636.1 MGP_WSBEiJ_G0014610.1 mouse_genomes_project 11 95320316 95345362 + B230206L02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016637.1 MGP_WSBEiJ_G0014610.1 mouse_genomes_project 11 95320333 95345362 + B230206L02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016638.1 MGP_WSBEiJ_G0014610.1 mouse_genomes_project 11 95322494 95325680 + B230206L02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0029985.1 MGP_WSBEiJ_G0018086.1 mouse_genomes_project 11 76213275 76221870 - MGP_WSBEiJ_P0029985 Fam101b protein_coding protein_coding MGP_WSBEiJ_T0029779.1 MGP_WSBEiJ_G0018020.1 mouse_genomes_project 11 73249026 73281049 + MGP_WSBEiJ_P0029779 Trpv1 protein_coding protein_coding MGP_WSBEiJ_T0029780.1 MGP_WSBEiJ_G0018020.1 mouse_genomes_project 11 73253015 73281049 + MGP_WSBEiJ_P0029780 Trpv1 protein_coding protein_coding MGP_WSBEiJ_T0029781.1 MGP_WSBEiJ_G0018020.1 mouse_genomes_project 11 73255066 73269571 + MGP_WSBEiJ_P0029781 Trpv1 protein_coding protein_coding MGP_WSBEiJ_T0029782.1 MGP_WSBEiJ_G0018020.1 mouse_genomes_project 11 73267046 73268971 + Trpv1 protein_coding processed_transcript MGP_WSBEiJ_T0030639.1 MGP_WSBEiJ_G0018245.1 mouse_genomes_project 11 86675414 86706273 + MGP_WSBEiJ_P0030639 Tbx4 protein_coding protein_coding MGP_WSBEiJ_T0030640.1 MGP_WSBEiJ_G0018245.1 mouse_genomes_project 11 86679052 86706275 + MGP_WSBEiJ_P0030640 Tbx4 protein_coding protein_coding MGP_WSBEiJ_T0030641.1 MGP_WSBEiJ_G0018245.1 mouse_genomes_project 11 86684500 86704923 + MGP_WSBEiJ_P0030641 Tbx4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0027736.1 MGP_WSBEiJ_G0017504.1 mouse_genomes_project 11 30283417 30290915 - MGP_WSBEiJ_P0027736 Efcab9 protein_coding protein_coding MGP_WSBEiJ_T0027737.1 MGP_WSBEiJ_G0017504.1 mouse_genomes_project 11 30284006 30296746 - MGP_WSBEiJ_P0027737 Efcab9 protein_coding protein_coding MGP_WSBEiJ_T0031901.1 MGP_WSBEiJ_G0018583.1 mouse_genomes_project 11 104278745 104283056 + MGP_WSBEiJ_P0031901 Tmub2 protein_coding protein_coding MGP_WSBEiJ_T0031902.1 MGP_WSBEiJ_G0018583.1 mouse_genomes_project 11 104278753 104282030 + Tmub2 protein_coding processed_transcript MGP_WSBEiJ_T0031903.1 MGP_WSBEiJ_G0018583.1 mouse_genomes_project 11 104278753 104283056 + MGP_WSBEiJ_P0031903 Tmub2 protein_coding protein_coding MGP_WSBEiJ_T0031904.1 MGP_WSBEiJ_G0018583.1 mouse_genomes_project 11 104278765 104281210 + Tmub2 protein_coding processed_transcript MGP_WSBEiJ_T0031905.1 MGP_WSBEiJ_G0018583.1 mouse_genomes_project 11 104279010 104283056 + MGP_WSBEiJ_P0031905 Tmub2 protein_coding protein_coding MGP_WSBEiJ_T0026974.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 341738 363461 - Smtn protein_coding processed_transcript MGP_WSBEiJ_T0026975.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 341738 363501 - MGP_WSBEiJ_P0026975 Smtn protein_coding protein_coding MGP_WSBEiJ_T0026976.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 341738 363501 - MGP_WSBEiJ_P0026976 Smtn protein_coding protein_coding MGP_WSBEiJ_T0026977.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 341738 352151 - MGP_WSBEiJ_P0026977 Smtn protein_coding protein_coding MGP_WSBEiJ_T0026978.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 341738 363448 - MGP_WSBEiJ_P0026978 Smtn protein_coding protein_coding MGP_WSBEiJ_T0026979.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 341738 361612 - MGP_WSBEiJ_P0026979 Smtn protein_coding protein_coding MGP_WSBEiJ_T0026980.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 344752 346768 - Smtn protein_coding processed_transcript MGP_WSBEiJ_T0026981.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 356673 364821 - MGP_WSBEiJ_P0026981 Smtn protein_coding protein_coding MGP_WSBEiJ_T0026982.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 356816 363460 - MGP_WSBEiJ_P0026982 Smtn protein_coding protein_coding MGP_WSBEiJ_T0026983.1 MGP_WSBEiJ_G0017331.1 mouse_genomes_project 11 359027 363458 - Smtn protein_coding processed_transcript MGP_WSBEiJ_T0012377.1 MGP_WSBEiJ_G0010507.1 mouse_genomes_project 11 62649876 62650109 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031103.1 MGP_WSBEiJ_G0018361.1 mouse_genomes_project 11 97689987 97693797 + MGP_WSBEiJ_P0031103 Hoxb7 protein_coding protein_coding MGP_WSBEiJ_T0031104.1 MGP_WSBEiJ_G0018361.1 mouse_genomes_project 11 97692078 97693128 + Hoxb7 protein_coding processed_transcript MGP_WSBEiJ_T0031591.1 MGP_WSBEiJ_G0018517.1 mouse_genomes_project 11 102459066 102489287 - MGP_WSBEiJ_P0031591 Zfp385c protein_coding protein_coding MGP_WSBEiJ_T0031592.1 MGP_WSBEiJ_G0018517.1 mouse_genomes_project 11 102461484 102490278 - Zfp385c protein_coding processed_transcript MGP_WSBEiJ_T0031593.1 MGP_WSBEiJ_G0018517.1 mouse_genomes_project 11 102462247 102496185 - MGP_WSBEiJ_P0031593 Zfp385c protein_coding protein_coding MGP_WSBEiJ_T0031594.1 MGP_WSBEiJ_G0018517.1 mouse_genomes_project 11 102470093 102526192 - MGP_WSBEiJ_P0031594 Zfp385c protein_coding protein_coding MGP_WSBEiJ_T0006175.1 MGP_WSBEiJ_G0005159.1 mouse_genomes_project 11 70885992 70887565 - 6330403K07Rik lincRNA lincRNA MGP_WSBEiJ_T0016612.1 MGP_WSBEiJ_G0014598.1 mouse_genomes_project 11 72183744 72187064 + 4930563E22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016613.1 MGP_WSBEiJ_G0014598.1 mouse_genomes_project 11 72183778 72187058 + 4930563E22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0029424.1 MGP_WSBEiJ_G0017942.1 mouse_genomes_project 11 69842039 69845654 + MGP_WSBEiJ_P0029424 Asgr1 protein_coding protein_coding MGP_WSBEiJ_T0029425.1 MGP_WSBEiJ_G0017942.1 mouse_genomes_project 11 69842321 69845654 + MGP_WSBEiJ_P0029425 Asgr1 protein_coding protein_coding MGP_WSBEiJ_T0029426.1 MGP_WSBEiJ_G0017942.1 mouse_genomes_project 11 69842329 69845671 + MGP_WSBEiJ_P0029426 Asgr1 protein_coding protein_coding MGP_WSBEiJ_T0029427.1 MGP_WSBEiJ_G0017942.1 mouse_genomes_project 11 69842664 69845654 + MGP_WSBEiJ_P0029427 Asgr1 protein_coding protein_coding MGP_WSBEiJ_T0029428.1 MGP_WSBEiJ_G0017942.1 mouse_genomes_project 11 69843854 69845130 + MGP_WSBEiJ_P0029428 Asgr1 protein_coding protein_coding MGP_WSBEiJ_T0033309.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123801643 123808238 - Sirt7 protein_coding retained_intron MGP_WSBEiJ_T0033310.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123801643 123808509 - Sirt7 protein_coding retained_intron MGP_WSBEiJ_T0033311.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123801643 123808283 - MGP_WSBEiJ_P0033311 Sirt7 protein_coding protein_coding MGP_WSBEiJ_T0033312.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123801645 123808268 - Sirt7 protein_coding retained_intron MGP_WSBEiJ_T0033313.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123801659 123808289 - Sirt7 protein_coding retained_intron MGP_WSBEiJ_T0033314.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123801691 123804251 - MGP_WSBEiJ_P0033314 Sirt7 protein_coding protein_coding MGP_WSBEiJ_T0033315.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123802039 123802640 - Sirt7 protein_coding processed_transcript MGP_WSBEiJ_T0033316.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123804272 123808259 - Sirt7 protein_coding processed_transcript MGP_WSBEiJ_T0033317.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123805263 123806075 - Sirt7 protein_coding retained_intron MGP_WSBEiJ_T0033318.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123806552 123808261 - Sirt7 protein_coding retained_intron MGP_WSBEiJ_T0033319.1 MGP_WSBEiJ_G0018871.1 mouse_genomes_project 11 123807259 123808253 - MGP_WSBEiJ_P0033319 Sirt7 protein_coding protein_coding MGP_WSBEiJ_T0028596.1 MGP_WSBEiJ_G0017762.1 mouse_genomes_project 11 58729833 58759849 + MGP_WSBEiJ_P0028596 Nlrp3 protein_coding protein_coding MGP_WSBEiJ_T0028597.1 MGP_WSBEiJ_G0017762.1 mouse_genomes_project 11 58730951 58759850 + MGP_WSBEiJ_P0028597 Nlrp3 protein_coding protein_coding MGP_WSBEiJ_T0028598.1 MGP_WSBEiJ_G0017762.1 mouse_genomes_project 11 58731021 58736740 + MGP_WSBEiJ_P0028598 Nlrp3 protein_coding protein_coding MGP_WSBEiJ_T0032227.1 MGP_WSBEiJ_G0018650.1 mouse_genomes_project 11 108363956 108364265 + MGP_WSBEiJ_P0032227 Gm10840 protein_coding protein_coding MGP_WSBEiJ_T0031260.1 MGP_WSBEiJ_G0018399.1 mouse_genomes_project 11 99288196 99292463 - MGP_WSBEiJ_P0031260 1700001P01Rik protein_coding protein_coding MGP_WSBEiJ_T0012501.1 MGP_WSBEiJ_G0010631.1 mouse_genomes_project 11 118434969 118435506 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028271.1 MGP_WSBEiJ_G0017655.1 mouse_genomes_project 11 52158847 52164524 + Gdf9 protein_coding processed_transcript MGP_WSBEiJ_T0028272.1 MGP_WSBEiJ_G0017655.1 mouse_genomes_project 11 52160659 52161598 + Gdf9 protein_coding processed_transcript MGP_WSBEiJ_T0028273.1 MGP_WSBEiJ_G0017655.1 mouse_genomes_project 11 52161116 52165528 + MGP_WSBEiJ_P0028273 Gdf9 protein_coding protein_coding MGP_WSBEiJ_T0029798.1 MGP_WSBEiJ_G0018027.1 mouse_genomes_project 11 73554987 73561134 - MGP_WSBEiJ_P0029798 protein_coding protein_coding MGP_WSBEiJ_T0016664.1 MGP_WSBEiJ_G0014629.1 mouse_genomes_project 11 106698736 106707252 - Gm22000 processed_transcript processed_transcript MGP_WSBEiJ_T0098927.1 MGP_WSBEiJ_G0037590.1 mouse_genomes_project 11 62159839 62159980 + Gm24151 snoRNA snoRNA MGP_WSBEiJ_T0029604.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795062 70821619 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029605.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795076 70821633 - MGP_WSBEiJ_P0029605 Nup88 protein_coding protein_coding MGP_WSBEiJ_T0029606.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795081 70798295 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029607.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795086 70821622 - MGP_WSBEiJ_P0029607 Nup88 protein_coding protein_coding MGP_WSBEiJ_T0029608.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795106 70821614 - MGP_WSBEiJ_P0029608 Nup88 protein_coding protein_coding MGP_WSBEiJ_T0029609.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795180 70821540 - MGP_WSBEiJ_P0029609 Nup88 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029610.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795883 70797105 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029611.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795942 70796493 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029612.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70795984 70796742 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029613.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70796417 70797039 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029614.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70796687 70800746 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029615.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70801495 70821621 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029616.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70806415 70808416 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029617.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70807113 70808867 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0029618.1 MGP_WSBEiJ_G0017980.1 mouse_genomes_project 11 70808153 70813704 - Nup88 protein_coding retained_intron MGP_WSBEiJ_T0028716.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60039079 60062235 - MGP_WSBEiJ_P0028716 Shmt1 protein_coding protein_coding MGP_WSBEiJ_T0028717.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60039876 60050350 - Shmt1 protein_coding processed_transcript MGP_WSBEiJ_T0028718.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60040119 60057962 - MGP_WSBEiJ_P0028718 Shmt1 protein_coding protein_coding MGP_WSBEiJ_T0028719.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60040119 60057962 - MGP_WSBEiJ_P0028719 Shmt1 protein_coding protein_coding MGP_WSBEiJ_T0028720.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60040119 60057962 - MGP_WSBEiJ_P0028720 Shmt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028721.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60040223 60045964 - Shmt1 protein_coding retained_intron MGP_WSBEiJ_T0028722.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60040571 60044147 - Shmt1 protein_coding retained_intron MGP_WSBEiJ_T0028723.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60043922 60048800 - Shmt1 protein_coding retained_intron MGP_WSBEiJ_T0028724.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60048191 60062061 - Shmt1 protein_coding retained_intron MGP_WSBEiJ_T0028725.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60049598 60053613 - Shmt1 protein_coding processed_transcript MGP_WSBEiJ_T0028726.1 MGP_WSBEiJ_G0017788.1 mouse_genomes_project 11 60055287 60062680 - Shmt1 protein_coding processed_transcript MGP_WSBEiJ_T0028217.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649326 50682014 + MGP_WSBEiJ_P0028217 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028218.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649326 50682014 + MGP_WSBEiJ_P0028218 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028219.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649326 50684395 + MGP_WSBEiJ_P0028219 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028220.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649326 50730186 + MGP_WSBEiJ_P0028220 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028221.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649326 50677666 + MGP_WSBEiJ_P0028221 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028222.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649330 50672634 + MGP_WSBEiJ_P0028222 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028223.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649346 50677733 + MGP_WSBEiJ_P0028223 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028224.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649359 50664475 + MGP_WSBEiJ_P0028224 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028225.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649370 50701299 + MGP_WSBEiJ_P0028225 Cdkl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028226.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50649395 50682014 + MGP_WSBEiJ_P0028226 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028227.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50650033 50735296 + MGP_WSBEiJ_P0028227 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028228.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50671821 50730628 + MGP_WSBEiJ_P0028228 Cdkl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028229.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50672045 50677588 + MGP_WSBEiJ_P0028229 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028230.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50676225 50735291 + MGP_WSBEiJ_P0028230 Cdkl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028231.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50676310 50735297 + MGP_WSBEiJ_P0028231 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0028232.1 MGP_WSBEiJ_G0017643.1 mouse_genomes_project 11 50677390 50735289 + MGP_WSBEiJ_P0028232 Cdkl3 protein_coding protein_coding MGP_WSBEiJ_T0006221.1 MGP_WSBEiJ_G0005190.1 mouse_genomes_project 11 89986318 89989755 - Gm11496 lincRNA lincRNA MGP_WSBEiJ_T0028560.1 MGP_WSBEiJ_G0017751.1 mouse_genomes_project 11 58350772 58358769 - MGP_WSBEiJ_P0028560 Guk1 protein_coding protein_coding MGP_WSBEiJ_T0028561.1 MGP_WSBEiJ_G0017751.1 mouse_genomes_project 11 58350944 58354628 - MGP_WSBEiJ_P0028561 Guk1 protein_coding protein_coding MGP_WSBEiJ_T0028562.1 MGP_WSBEiJ_G0017751.1 mouse_genomes_project 11 58351007 58352342 - Guk1 protein_coding retained_intron MGP_WSBEiJ_T0028563.1 MGP_WSBEiJ_G0017751.1 mouse_genomes_project 11 58351053 58351746 - Guk1 protein_coding retained_intron MGP_WSBEiJ_T0028564.1 MGP_WSBEiJ_G0017751.1 mouse_genomes_project 11 58353068 58358629 - Guk1 protein_coding retained_intron MGP_WSBEiJ_T0028565.1 MGP_WSBEiJ_G0017751.1 mouse_genomes_project 11 58353678 58360072 - MGP_WSBEiJ_P0028565 Guk1 protein_coding protein_coding MGP_WSBEiJ_T0012443.1 MGP_WSBEiJ_G0010573.1 mouse_genomes_project 11 92931006 92931955 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032202.1 MGP_WSBEiJ_G0018642.1 mouse_genomes_project 11 108130348 108141000 - MGP_WSBEiJ_P0032202 Cyb561 protein_coding protein_coding MGP_WSBEiJ_T0032203.1 MGP_WSBEiJ_G0018642.1 mouse_genomes_project 11 108131738 108140780 - MGP_WSBEiJ_P0032203 Cyb561 protein_coding protein_coding MGP_WSBEiJ_T0032204.1 MGP_WSBEiJ_G0018642.1 mouse_genomes_project 11 108132143 108132832 - Cyb561 protein_coding processed_transcript MGP_WSBEiJ_T0032205.1 MGP_WSBEiJ_G0018642.1 mouse_genomes_project 11 108132453 108149747 - MGP_WSBEiJ_P0032205 Cyb561 protein_coding protein_coding MGP_WSBEiJ_T0032206.1 MGP_WSBEiJ_G0018642.1 mouse_genomes_project 11 108132864 108141070 - MGP_WSBEiJ_P0032206 Cyb561 protein_coding protein_coding MGP_WSBEiJ_T0032207.1 MGP_WSBEiJ_G0018642.1 mouse_genomes_project 11 108133209 108141128 - MGP_WSBEiJ_P0032207 Cyb561 protein_coding protein_coding MGP_WSBEiJ_T0027252.1 MGP_WSBEiJ_G0017394.1 mouse_genomes_project 11 3445564 3453772 - MGP_WSBEiJ_P0027252 Purb protein_coding protein_coding MGP_WSBEiJ_T0029722.1 MGP_WSBEiJ_G0018004.1 mouse_genomes_project 11 72478111 72485628 - Spns3 protein_coding processed_transcript MGP_WSBEiJ_T0029723.1 MGP_WSBEiJ_G0018004.1 mouse_genomes_project 11 72481341 72534789 - MGP_WSBEiJ_P0029723 Spns3 protein_coding protein_coding MGP_WSBEiJ_T0029724.1 MGP_WSBEiJ_G0018004.1 mouse_genomes_project 11 72481346 72534584 - MGP_WSBEiJ_P0029724 Spns3 protein_coding protein_coding MGP_WSBEiJ_T0009570.1 MGP_WSBEiJ_G0007727.1 mouse_genomes_project 11 78386390 78386462 - Mir451b miRNA miRNA MGP_WSBEiJ_T0027139.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2026444 2033614 + MGP_WSBEiJ_P0027139 Rhbdd3 protein_coding protein_coding MGP_WSBEiJ_T0027140.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2026595 2028106 + Rhbdd3 protein_coding processed_transcript MGP_WSBEiJ_T0027141.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2026791 2028026 + Rhbdd3 protein_coding processed_transcript MGP_WSBEiJ_T0027142.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2026951 2030872 + MGP_WSBEiJ_P0027142 Rhbdd3 protein_coding protein_coding MGP_WSBEiJ_T0027143.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2026957 2033614 + MGP_WSBEiJ_P0027143 Rhbdd3 protein_coding protein_coding MGP_WSBEiJ_T0027144.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2026994 2030777 + MGP_WSBEiJ_P0027144 Rhbdd3 protein_coding protein_coding MGP_WSBEiJ_T0027145.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2027126 2030783 + MGP_WSBEiJ_P0027145 Rhbdd3 protein_coding protein_coding MGP_WSBEiJ_T0027146.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2027675 2033614 + MGP_WSBEiJ_P0027146 Rhbdd3 protein_coding protein_coding MGP_WSBEiJ_T0027147.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2027688 2032751 + MGP_WSBEiJ_P0027147 Rhbdd3 protein_coding protein_coding MGP_WSBEiJ_T0027148.1 MGP_WSBEiJ_G0017367.1 mouse_genomes_project 11 2027755 2033616 + Rhbdd3 protein_coding processed_transcript MGP_WSBEiJ_T0028542.1 MGP_WSBEiJ_G0017747.1 mouse_genomes_project 11 58111071 58124242 + MGP_WSBEiJ_P0028542 Trim11 protein_coding protein_coding MGP_WSBEiJ_T0028543.1 MGP_WSBEiJ_G0017747.1 mouse_genomes_project 11 58111093 58124245 + MGP_WSBEiJ_P0028543 Trim11 protein_coding protein_coding MGP_WSBEiJ_T0028544.1 MGP_WSBEiJ_G0017747.1 mouse_genomes_project 11 58111094 58124244 + MGP_WSBEiJ_P0028544 Trim11 protein_coding protein_coding MGP_WSBEiJ_T0012243.1 MGP_WSBEiJ_G0010373.1 mouse_genomes_project 11 14833878 14834561 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012288.1 MGP_WSBEiJ_G0010418.1 mouse_genomes_project 11 27657120 27657936 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031875.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104180421 104219342 - MGP_WSBEiJ_P0031875 Hdac5 protein_coding protein_coding MGP_WSBEiJ_T0031876.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181732 104219300 - MGP_WSBEiJ_P0031876 Hdac5 protein_coding protein_coding MGP_WSBEiJ_T0031877.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181735 104183174 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031878.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181737 104183857 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031879.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181737 104205987 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031880.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181737 104182547 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031881.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181737 104182557 - MGP_WSBEiJ_P0031881 Hdac5 protein_coding protein_coding MGP_WSBEiJ_T0031882.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181737 104219315 - MGP_WSBEiJ_P0031882 Hdac5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031883.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181739 104219312 - MGP_WSBEiJ_P0031883 Hdac5 protein_coding protein_coding MGP_WSBEiJ_T0031884.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104181739 104219342 - MGP_WSBEiJ_P0031884 Hdac5 protein_coding protein_coding MGP_WSBEiJ_T0031885.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104182225 104184068 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031886.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104182669 104184884 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031887.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104184667 104185482 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031888.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104184952 104186346 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031889.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104185378 104186805 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031890.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104191875 104219318 - MGP_WSBEiJ_P0031890 Hdac5 protein_coding protein_coding MGP_WSBEiJ_T0031891.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104192616 104205986 - MGP_WSBEiJ_P0031891 Hdac5 protein_coding protein_coding MGP_WSBEiJ_T0031892.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104192992 104205987 - Hdac5 protein_coding retained_intron MGP_WSBEiJ_T0031893.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104205768 104219309 - Hdac5 protein_coding processed_transcript MGP_WSBEiJ_T0031894.1 MGP_WSBEiJ_G0018580.1 mouse_genomes_project 11 104206210 104219322 - Hdac5 protein_coding processed_transcript MGP_WSBEiJ_T0027430.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17960486 18020399 - MGP_WSBEiJ_P0027430 Aftph protein_coding protein_coding MGP_WSBEiJ_T0027431.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17960486 18005742 - MGP_WSBEiJ_P0027431 Aftph protein_coding protein_coding MGP_WSBEiJ_T0027432.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17961119 18005277 - MGP_WSBEiJ_P0027432 Aftph protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027433.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17961145 18020262 - MGP_WSBEiJ_P0027433 Aftph protein_coding protein_coding MGP_WSBEiJ_T0027434.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17961384 17968219 - Aftph protein_coding retained_intron MGP_WSBEiJ_T0027435.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17961521 18004307 - MGP_WSBEiJ_P0027435 Aftph protein_coding protein_coding MGP_WSBEiJ_T0027436.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17971427 17990138 - Aftph protein_coding retained_intron MGP_WSBEiJ_T0027437.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17979731 17990064 - Aftph protein_coding retained_intron MGP_WSBEiJ_T0027438.1 MGP_WSBEiJ_G0017438.1 mouse_genomes_project 11 17986440 17990044 - Aftph protein_coding retained_intron MGP_WSBEiJ_T0016629.1 MGP_WSBEiJ_G0014607.1 mouse_genomes_project 11 84261479 84305296 + E230016K23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016630.1 MGP_WSBEiJ_G0014607.1 mouse_genomes_project 11 84261507 84281552 + E230016K23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016631.1 MGP_WSBEiJ_G0014607.1 mouse_genomes_project 11 84303264 84304506 + E230016K23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0030891.1 MGP_WSBEiJ_G0018305.1 mouse_genomes_project 11 95122061 95128883 - MGP_WSBEiJ_P0030891 Nme2 protein_coding protein_coding MGP_WSBEiJ_T0030892.1 MGP_WSBEiJ_G0018305.1 mouse_genomes_project 11 95122064 95128407 - MGP_WSBEiJ_P0030892 Nme2 protein_coding protein_coding MGP_WSBEiJ_T0003157.1 MGP_WSBEiJ_G0002932.1 mouse_genomes_project 11 78605753 78606082 - Gm11192 antisense antisense MGP_WSBEiJ_T0031825.1 MGP_WSBEiJ_G0018569.1 mouse_genomes_project 11 103941579 103957391 - MGP_WSBEiJ_P0031825 Dusp3 protein_coding protein_coding MGP_WSBEiJ_T0031826.1 MGP_WSBEiJ_G0018569.1 mouse_genomes_project 11 103941579 103955176 - MGP_WSBEiJ_P0031826 Dusp3 protein_coding protein_coding MGP_WSBEiJ_T0031827.1 MGP_WSBEiJ_G0018569.1 mouse_genomes_project 11 103941579 103957391 - MGP_WSBEiJ_P0031827 Dusp3 protein_coding protein_coding MGP_WSBEiJ_T0031828.1 MGP_WSBEiJ_G0018569.1 mouse_genomes_project 11 103941579 103953879 - MGP_WSBEiJ_P0031828 Dusp3 protein_coding protein_coding MGP_WSBEiJ_T0031829.1 MGP_WSBEiJ_G0018569.1 mouse_genomes_project 11 103943895 103952071 - MGP_WSBEiJ_P0031829 Dusp3 protein_coding protein_coding MGP_WSBEiJ_T0031830.1 MGP_WSBEiJ_G0018569.1 mouse_genomes_project 11 103945133 103955155 - MGP_WSBEiJ_P0031830 Dusp3 protein_coding protein_coding MGP_WSBEiJ_T0031831.1 MGP_WSBEiJ_G0018569.1 mouse_genomes_project 11 103950976 103955128 - MGP_WSBEiJ_P0031831 Dusp3 protein_coding protein_coding MGP_WSBEiJ_T0006084.1 MGP_WSBEiJ_G0005080.1 mouse_genomes_project 11 15302004 15310468 + Gm12018 lincRNA lincRNA MGP_WSBEiJ_T0027913.1 MGP_WSBEiJ_G0017556.1 mouse_genomes_project 11 44332952 44430060 + MGP_WSBEiJ_P0027913 Adam19 protein_coding protein_coding MGP_WSBEiJ_T0027914.1 MGP_WSBEiJ_G0017556.1 mouse_genomes_project 11 44333018 44342494 + Adam19 protein_coding processed_transcript MGP_WSBEiJ_T0027915.1 MGP_WSBEiJ_G0017556.1 mouse_genomes_project 11 44407395 44426582 + Adam19 protein_coding processed_transcript MGP_WSBEiJ_T0027916.1 MGP_WSBEiJ_G0017556.1 mouse_genomes_project 11 44416827 44420344 + Adam19 protein_coding retained_intron MGP_WSBEiJ_T0029209.1 MGP_WSBEiJ_G0017896.1 mouse_genomes_project 11 69138566 69156868 - MGP_WSBEiJ_P0029209 Kdm6b protein_coding protein_coding MGP_WSBEiJ_T0029210.1 MGP_WSBEiJ_G0017896.1 mouse_genomes_project 11 69141975 69159234 - MGP_WSBEiJ_P0029210 Kdm6b protein_coding unknown_likely_coding MGP_WSBEiJ_T0029211.1 MGP_WSBEiJ_G0017896.1 mouse_genomes_project 11 69145455 69146393 - Kdm6b protein_coding processed_transcript MGP_WSBEiJ_T0003222.1 MGP_WSBEiJ_G0002980.1 mouse_genomes_project 11 102520300 102533099 + Dhx58os antisense antisense MGP_WSBEiJ_T0032924.1 MGP_WSBEiJ_G0018794.1 mouse_genomes_project 11 119733894 119761931 - MGP_WSBEiJ_P0032924 Mxra7 protein_coding protein_coding MGP_WSBEiJ_T0032925.1 MGP_WSBEiJ_G0018794.1 mouse_genomes_project 11 119738547 119761898 - MGP_WSBEiJ_P0032925 Mxra7 protein_coding protein_coding MGP_WSBEiJ_T0032926.1 MGP_WSBEiJ_G0018794.1 mouse_genomes_project 11 119738739 119761888 - MGP_WSBEiJ_P0032926 Mxra7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032934.1 MGP_WSBEiJ_G0018796.1 mouse_genomes_project 11 119779623 119786103 + MGP_WSBEiJ_P0032934 protein_coding protein_coding MGP_WSBEiJ_T0032935.1 MGP_WSBEiJ_G0018796.1 mouse_genomes_project 11 119779900 119786714 + protein_coding retained_intron MGP_WSBEiJ_T0032936.1 MGP_WSBEiJ_G0018796.1 mouse_genomes_project 11 119779906 119782485 + protein_coding retained_intron MGP_WSBEiJ_T0032937.1 MGP_WSBEiJ_G0018796.1 mouse_genomes_project 11 119779930 119782407 + protein_coding retained_intron MGP_WSBEiJ_T0032938.1 MGP_WSBEiJ_G0018796.1 mouse_genomes_project 11 119780018 119785992 + protein_coding retained_intron MGP_WSBEiJ_T0032939.1 MGP_WSBEiJ_G0018796.1 mouse_genomes_project 11 119780020 119785416 + MGP_WSBEiJ_P0032939 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032940.1 MGP_WSBEiJ_G0018796.1 mouse_genomes_project 11 119780020 119784719 + MGP_WSBEiJ_P0032940 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032941.1 MGP_WSBEiJ_G0018796.1 mouse_genomes_project 11 119785263 119790607 + MGP_WSBEiJ_P0032941 protein_coding protein_coding MGP_WSBEiJ_T0027902.1 MGP_WSBEiJ_G0017552.1 mouse_genomes_project 11 44119519 44179314 + MGP_WSBEiJ_P0027902 Clint1 protein_coding protein_coding MGP_WSBEiJ_T0027903.1 MGP_WSBEiJ_G0017552.1 mouse_genomes_project 11 44119519 44179314 + MGP_WSBEiJ_P0027903 Clint1 protein_coding protein_coding MGP_WSBEiJ_T0027904.1 MGP_WSBEiJ_G0017552.1 mouse_genomes_project 11 44149643 44179314 + Clint1 protein_coding processed_transcript MGP_WSBEiJ_T0016581.1 MGP_WSBEiJ_G0014580.1 mouse_genomes_project 11 27942889 27957432 + Gm8098 processed_transcript processed_transcript MGP_WSBEiJ_T0032101.1 MGP_WSBEiJ_G0018619.1 mouse_genomes_project 11 105724931 105732739 - MGP_WSBEiJ_P0032101 Lyzl6 protein_coding protein_coding MGP_WSBEiJ_T0032102.1 MGP_WSBEiJ_G0018619.1 mouse_genomes_project 11 105724934 105732750 - MGP_WSBEiJ_P0032102 Lyzl6 protein_coding protein_coding MGP_WSBEiJ_T0032103.1 MGP_WSBEiJ_G0018619.1 mouse_genomes_project 11 105724937 105728883 - Lyzl6 protein_coding processed_transcript MGP_WSBEiJ_T0027393.1 MGP_WSBEiJ_G0017427.1 mouse_genomes_project 11 14369838 14421091 + Wdr92 protein_coding processed_transcript MGP_WSBEiJ_T0027397.1 MGP_WSBEiJ_G0017427.1 mouse_genomes_project 11 14399600 14421973 + MGP_WSBEiJ_P0027397 Wdr92 protein_coding protein_coding MGP_WSBEiJ_T0009571.1 MGP_WSBEiJ_G0007728.1 mouse_genomes_project 11 78386390 78386462 + Mir451a miRNA miRNA MGP_WSBEiJ_T0028496.1 MGP_WSBEiJ_G0017715.1 mouse_genomes_project 11 57399751 57414877 + MGP_WSBEiJ_P0028496 Lypd8 protein_coding protein_coding MGP_WSBEiJ_T0028497.1 MGP_WSBEiJ_G0017715.1 mouse_genomes_project 11 57399751 57414686 + MGP_WSBEiJ_P0028497 Lypd8 protein_coding protein_coding MGP_WSBEiJ_T0100499.1 MGP_WSBEiJ_G0038958.1 mouse_genomes_project 11 101740975 101741392 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0031806.1 MGP_WSBEiJ_G0018565.1 mouse_genomes_project 11 103678986 103681768 + Dhx8 protein_coding retained_intron MGP_WSBEiJ_T0031807.1 MGP_WSBEiJ_G0018565.1 mouse_genomes_project 11 103679017 103718224 + MGP_WSBEiJ_P0031807 Dhx8 protein_coding protein_coding MGP_WSBEiJ_T0031808.1 MGP_WSBEiJ_G0018565.1 mouse_genomes_project 11 103679096 103680510 + Dhx8 protein_coding retained_intron MGP_WSBEiJ_T0031809.1 MGP_WSBEiJ_G0018565.1 mouse_genomes_project 11 103679108 103717673 + MGP_WSBEiJ_P0031809 Dhx8 protein_coding protein_coding MGP_WSBEiJ_T0031810.1 MGP_WSBEiJ_G0018565.1 mouse_genomes_project 11 103699024 103700418 + Dhx8 protein_coding retained_intron MGP_WSBEiJ_T0012376.1 MGP_WSBEiJ_G0010506.1 mouse_genomes_project 11 62130246 62130543 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027573.1 MGP_WSBEiJ_G0017468.1 mouse_genomes_project 11 23956854 24081141 - MGP_WSBEiJ_P0027573 Vrk2 protein_coding protein_coding MGP_WSBEiJ_T0027574.1 MGP_WSBEiJ_G0017468.1 mouse_genomes_project 11 23956936 24083332 - MGP_WSBEiJ_P0027574 Vrk2 protein_coding protein_coding MGP_WSBEiJ_T0027575.1 MGP_WSBEiJ_G0017468.1 mouse_genomes_project 11 24021059 24083034 - Vrk2 protein_coding retained_intron MGP_WSBEiJ_T0027576.1 MGP_WSBEiJ_G0017468.1 mouse_genomes_project 11 24021475 24037822 - Vrk2 protein_coding processed_transcript MGP_WSBEiJ_T0027577.1 MGP_WSBEiJ_G0017468.1 mouse_genomes_project 11 24033851 24083335 - Vrk2 protein_coding retained_intron MGP_WSBEiJ_T0027578.1 MGP_WSBEiJ_G0017468.1 mouse_genomes_project 11 24036304 24083411 - MGP_WSBEiJ_P0027578 Vrk2 protein_coding protein_coding MGP_WSBEiJ_T0027579.1 MGP_WSBEiJ_G0017468.1 mouse_genomes_project 11 24072671 24083015 - Vrk2 protein_coding processed_transcript MGP_WSBEiJ_T0016587.1 MGP_WSBEiJ_G0014584.1 mouse_genomes_project 11 47193339 47203171 - Gm16170 processed_transcript processed_transcript MGP_WSBEiJ_T0030831.1 MGP_WSBEiJ_G0018291.1 mouse_genomes_project 11 90314892 90316587 - MGP_WSBEiJ_P0030831 Nog protein_coding protein_coding MGP_WSBEiJ_T0032217.1 MGP_WSBEiJ_G0018646.1 mouse_genomes_project 11 108233680 108259537 + MGP_WSBEiJ_P0032217 Dcaf7 protein_coding protein_coding MGP_WSBEiJ_T0032218.1 MGP_WSBEiJ_G0018646.1 mouse_genomes_project 11 108233708 108246279 + Dcaf7 protein_coding retained_intron MGP_WSBEiJ_T0032303.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109050110 109059003 - MGP_WSBEiJ_P0032303 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032304.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109050703 109054196 - protein_coding processed_transcript MGP_WSBEiJ_T0032305.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109053848 109058976 - protein_coding processed_transcript MGP_WSBEiJ_T0032306.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109054277 109055591 - protein_coding retained_intron MGP_WSBEiJ_T0032307.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109054498 109058825 - MGP_WSBEiJ_P0032307 protein_coding unknown_likely_coding MGP_WSBEiJ_T0032308.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109054498 109058998 - MGP_WSBEiJ_P0032308 protein_coding unknown_likely_coding MGP_WSBEiJ_T0032309.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109055687 109056595 - protein_coding processed_transcript MGP_WSBEiJ_T0032310.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109056040 109059696 - MGP_WSBEiJ_P0032310 protein_coding protein_coding MGP_WSBEiJ_T0032311.1 MGP_WSBEiJ_G0018668.1 mouse_genomes_project 11 109056615 109059392 - MGP_WSBEiJ_P0032311 protein_coding protein_coding MGP_WSBEiJ_T0012259.1 MGP_WSBEiJ_G0010389.1 mouse_genomes_project 11 18530210 18530812 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097739.1 MGP_WSBEiJ_G0036402.1 mouse_genomes_project 11 107246308 107246413 + Gm25362 snRNA snRNA MGP_WSBEiJ_T0028060.1 MGP_WSBEiJ_G0017605.1 mouse_genomes_project 11 48426146 48499972 + MGP_WSBEiJ_P0028060 Rasgef1c protein_coding protein_coding MGP_WSBEiJ_T0028061.1 MGP_WSBEiJ_G0017605.1 mouse_genomes_project 11 48426166 48499965 + MGP_WSBEiJ_P0028061 Rasgef1c protein_coding protein_coding MGP_WSBEiJ_T0028062.1 MGP_WSBEiJ_G0017605.1 mouse_genomes_project 11 48426472 48500744 + MGP_WSBEiJ_P0028062 Rasgef1c protein_coding protein_coding MGP_WSBEiJ_T0028063.1 MGP_WSBEiJ_G0017605.1 mouse_genomes_project 11 48483296 48495605 + Rasgef1c protein_coding processed_transcript MGP_WSBEiJ_T0032346.1 MGP_WSBEiJ_G0018676.1 mouse_genomes_project 11 109870776 109904905 + Helz protein_coding processed_transcript MGP_WSBEiJ_T0032347.1 MGP_WSBEiJ_G0018676.1 mouse_genomes_project 11 109870802 110003161 + MGP_WSBEiJ_P0032347 Helz protein_coding protein_coding MGP_WSBEiJ_T0032348.1 MGP_WSBEiJ_G0018676.1 mouse_genomes_project 11 109870806 110019600 + MGP_WSBEiJ_P0032348 Helz protein_coding protein_coding MGP_WSBEiJ_T0032349.1 MGP_WSBEiJ_G0018676.1 mouse_genomes_project 11 109870814 110026457 + MGP_WSBEiJ_P0032349 Helz protein_coding protein_coding MGP_WSBEiJ_T0032350.1 MGP_WSBEiJ_G0018676.1 mouse_genomes_project 11 109956274 110003161 + MGP_WSBEiJ_P0032350 Helz protein_coding protein_coding MGP_WSBEiJ_T0032351.1 MGP_WSBEiJ_G0018676.1 mouse_genomes_project 11 109964267 109975778 + Helz protein_coding processed_transcript MGP_WSBEiJ_T0032352.1 MGP_WSBEiJ_G0018676.1 mouse_genomes_project 11 110001925 110003862 + Helz protein_coding processed_transcript MGP_WSBEiJ_T0032353.1 MGP_WSBEiJ_G0018676.1 mouse_genomes_project 11 110003827 110019170 + Helz protein_coding processed_transcript MGP_WSBEiJ_T0030533.1 MGP_WSBEiJ_G0018223.1 mouse_genomes_project 11 84638261 84660248 + MGP_WSBEiJ_P0030533 Ddx52 protein_coding protein_coding MGP_WSBEiJ_T0030534.1 MGP_WSBEiJ_G0018223.1 mouse_genomes_project 11 84642407 84648325 + Ddx52 protein_coding processed_transcript MGP_WSBEiJ_T0027568.1 MGP_WSBEiJ_G0017467.1 mouse_genomes_project 11 23881127 23957409 + MGP_WSBEiJ_P0027568 Fancl protein_coding protein_coding MGP_WSBEiJ_T0027569.1 MGP_WSBEiJ_G0017467.1 mouse_genomes_project 11 23882194 23954659 + Fancl protein_coding processed_transcript MGP_WSBEiJ_T0027570.1 MGP_WSBEiJ_G0017467.1 mouse_genomes_project 11 23882194 23918834 + MGP_WSBEiJ_P0027570 Fancl protein_coding protein_coding MGP_WSBEiJ_T0027571.1 MGP_WSBEiJ_G0017467.1 mouse_genomes_project 11 23882194 23956954 + MGP_WSBEiJ_P0027571 Fancl protein_coding protein_coding MGP_WSBEiJ_T0027572.1 MGP_WSBEiJ_G0017467.1 mouse_genomes_project 11 23953869 23956963 + MGP_WSBEiJ_P0027572 Fancl protein_coding protein_coding MGP_WSBEiJ_T0012209.1 MGP_WSBEiJ_G0010339.1 mouse_genomes_project 11 975596 976066 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032040.1 MGP_WSBEiJ_G0018607.1 mouse_genomes_project 11 105090052 105107701 + Nmt1 protein_coding processed_transcript MGP_WSBEiJ_T0032041.1 MGP_WSBEiJ_G0018607.1 mouse_genomes_project 11 105090208 105136856 + MGP_WSBEiJ_P0032041 Nmt1 protein_coding protein_coding MGP_WSBEiJ_T0032042.1 MGP_WSBEiJ_G0018607.1 mouse_genomes_project 11 105090447 105123566 + Nmt1 protein_coding processed_transcript MGP_WSBEiJ_T0033423.1 MGP_WSBEiJ_G0018890.1 mouse_genomes_project 11 124242516 124245212 - MGP_WSBEiJ_P0033423 Cd7 protein_coding protein_coding MGP_WSBEiJ_T0033424.1 MGP_WSBEiJ_G0018890.1 mouse_genomes_project 11 124243678 124245212 - Cd7 protein_coding retained_intron MGP_WSBEiJ_T0029932.1 MGP_WSBEiJ_G0018075.1 mouse_genomes_project 11 75666076 75669152 + MGP_WSBEiJ_P0029932 Rilp protein_coding protein_coding MGP_WSBEiJ_T0029933.1 MGP_WSBEiJ_G0018075.1 mouse_genomes_project 11 75666450 75669147 + Rilp protein_coding retained_intron MGP_WSBEiJ_T0003202.1 MGP_WSBEiJ_G0002966.1 mouse_genomes_project 11 97751100 97762722 - Hoxb3os antisense antisense MGP_WSBEiJ_T0003203.1 MGP_WSBEiJ_G0002966.1 mouse_genomes_project 11 97753509 97755954 - Hoxb3os antisense antisense MGP_WSBEiJ_T0029588.1 MGP_WSBEiJ_G0017976.1 mouse_genomes_project 11 70533554 70569297 + MGP_WSBEiJ_P0029588 Kif1c protein_coding protein_coding MGP_WSBEiJ_T0029589.1 MGP_WSBEiJ_G0017976.1 mouse_genomes_project 11 70533554 70541792 + MGP_WSBEiJ_P0029589 Kif1c protein_coding protein_coding MGP_WSBEiJ_T0029590.1 MGP_WSBEiJ_G0017976.1 mouse_genomes_project 11 70533567 70567718 + MGP_WSBEiJ_P0029590 Kif1c protein_coding protein_coding MGP_WSBEiJ_T0029591.1 MGP_WSBEiJ_G0017976.1 mouse_genomes_project 11 70533582 70567755 + MGP_WSBEiJ_P0029591 Kif1c protein_coding protein_coding MGP_WSBEiJ_T0029592.1 MGP_WSBEiJ_G0017976.1 mouse_genomes_project 11 70533656 70569297 + MGP_WSBEiJ_P0029592 Kif1c protein_coding protein_coding MGP_WSBEiJ_T0033235.1 MGP_WSBEiJ_G0018854.1 mouse_genomes_project 11 123615421 123619717 + MGP_WSBEiJ_P0033235 Tspan10 protein_coding protein_coding MGP_WSBEiJ_T0033236.1 MGP_WSBEiJ_G0018854.1 mouse_genomes_project 11 123615448 123617083 + Tspan10 protein_coding processed_transcript MGP_WSBEiJ_T0009604.1 MGP_WSBEiJ_G0007761.1 mouse_genomes_project 11 104691509 104691618 - Gm22920 miRNA miRNA MGP_WSBEiJ_T0097194.1 MGP_WSBEiJ_G0035875.1 mouse_genomes_project 11 120048615 120048808 + Gm26083 scaRNA scaRNA MGP_WSBEiJ_T0003141.1 MGP_WSBEiJ_G0002918.1 mouse_genomes_project 11 67794925 67798886 - C78197 antisense antisense MGP_WSBEiJ_T0012432.1 MGP_WSBEiJ_G0010562.1 mouse_genomes_project 11 86740672 86741151 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028031.1 MGP_WSBEiJ_G0017592.1 mouse_genomes_project 11 47803333 47804269 + MGP_WSBEiJ_P0028031 Olfr1390 protein_coding protein_coding MGP_WSBEiJ_T0027253.1 MGP_WSBEiJ_G0017395.1 mouse_genomes_project 11 3499583 3513973 - MGP_WSBEiJ_P0027253 Myo1g protein_coding protein_coding MGP_WSBEiJ_T0027254.1 MGP_WSBEiJ_G0017395.1 mouse_genomes_project 11 3499709 3513912 - MGP_WSBEiJ_P0027254 Myo1g protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027255.1 MGP_WSBEiJ_G0017395.1 mouse_genomes_project 11 3500904 3501721 - Myo1g protein_coding retained_intron MGP_WSBEiJ_T0027256.1 MGP_WSBEiJ_G0017395.1 mouse_genomes_project 11 3505999 3513973 - Myo1g protein_coding retained_intron MGP_WSBEiJ_T0027257.1 MGP_WSBEiJ_G0017395.1 mouse_genomes_project 11 3507538 3508536 - Myo1g protein_coding retained_intron MGP_WSBEiJ_T0027258.1 MGP_WSBEiJ_G0017395.1 mouse_genomes_project 11 3511029 3513980 - MGP_WSBEiJ_P0027258 Myo1g protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027259.1 MGP_WSBEiJ_G0017395.1 mouse_genomes_project 11 3512081 3512539 - MGP_WSBEiJ_P0027259 Myo1g protein_coding protein_coding MGP_WSBEiJ_T0029909.1 MGP_WSBEiJ_G0018070.1 mouse_genomes_project 11 75554659 75567041 - MGP_WSBEiJ_P0029909 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029910.1 MGP_WSBEiJ_G0018070.1 mouse_genomes_project 11 75554701 75562700 - MGP_WSBEiJ_P0029910 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029911.1 MGP_WSBEiJ_G0018070.1 mouse_genomes_project 11 75554857 75560409 - MGP_WSBEiJ_P0029911 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029912.1 MGP_WSBEiJ_G0018070.1 mouse_genomes_project 11 75558579 75566495 - MGP_WSBEiJ_P0029912 protein_coding protein_coding MGP_WSBEiJ_T0029913.1 MGP_WSBEiJ_G0018070.1 mouse_genomes_project 11 75558638 75559857 - protein_coding retained_intron MGP_WSBEiJ_T0029914.1 MGP_WSBEiJ_G0018070.1 mouse_genomes_project 11 75559582 75566464 - MGP_WSBEiJ_P0029914 protein_coding protein_coding MGP_WSBEiJ_T0029915.1 MGP_WSBEiJ_G0018070.1 mouse_genomes_project 11 75560148 75566461 - MGP_WSBEiJ_P0029915 protein_coding protein_coding MGP_WSBEiJ_T0029916.1 MGP_WSBEiJ_G0018070.1 mouse_genomes_project 11 75560994 75562991 - MGP_WSBEiJ_P0029916 protein_coding protein_coding MGP_WSBEiJ_T0097681.1 MGP_WSBEiJ_G0036344.1 mouse_genomes_project 11 20888435 20888542 - Gm22753 snRNA snRNA MGP_WSBEiJ_T0030321.1 MGP_WSBEiJ_G0018158.1 mouse_genomes_project 11 79919344 79922453 - MGP_WSBEiJ_P0030321 Omg protein_coding protein_coding MGP_WSBEiJ_T0031083.1 MGP_WSBEiJ_G0018353.1 mouse_genomes_project 11 97418436 97432707 + MGP_WSBEiJ_P0031083 Snf8 protein_coding protein_coding MGP_WSBEiJ_T0031084.1 MGP_WSBEiJ_G0018353.1 mouse_genomes_project 11 97418507 97428939 + Snf8 protein_coding processed_transcript MGP_WSBEiJ_T0031085.1 MGP_WSBEiJ_G0018353.1 mouse_genomes_project 11 97418516 97432707 + MGP_WSBEiJ_P0031085 Snf8 protein_coding protein_coding MGP_WSBEiJ_T0031086.1 MGP_WSBEiJ_G0018353.1 mouse_genomes_project 11 97429966 97432707 + Snf8 protein_coding processed_transcript MGP_WSBEiJ_T0031087.1 MGP_WSBEiJ_G0018353.1 mouse_genomes_project 11 97430100 97432596 + Snf8 protein_coding processed_transcript MGP_WSBEiJ_T0028064.1 MGP_WSBEiJ_G0017606.1 mouse_genomes_project 11 48549274 48633068 + MGP_WSBEiJ_P0028064 Rnf130 protein_coding protein_coding MGP_WSBEiJ_T0028065.1 MGP_WSBEiJ_G0017606.1 mouse_genomes_project 11 48549327 48632879 + MGP_WSBEiJ_P0028065 Rnf130 protein_coding protein_coding MGP_WSBEiJ_T0028066.1 MGP_WSBEiJ_G0017606.1 mouse_genomes_project 11 48622003 48633073 + Rnf130 protein_coding processed_transcript MGP_WSBEiJ_T0097272.1 MGP_WSBEiJ_G0035951.1 mouse_genomes_project 11 109798282 109799465 + Gm11722 sense_intronic sense_intronic MGP_WSBEiJ_T0029148.1 MGP_WSBEiJ_G0017880.1 mouse_genomes_project 11 68775490 68787491 + MGP_WSBEiJ_P0029148 Per1 protein_coding protein_coding MGP_WSBEiJ_T0029149.1 MGP_WSBEiJ_G0017880.1 mouse_genomes_project 11 68779980 68790993 + MGP_WSBEiJ_P0029149 Per1 protein_coding protein_coding MGP_WSBEiJ_T0029150.1 MGP_WSBEiJ_G0017880.1 mouse_genomes_project 11 68781184 68782081 + MGP_WSBEiJ_P0029150 Per1 protein_coding protein_coding MGP_WSBEiJ_T0029151.1 MGP_WSBEiJ_G0017880.1 mouse_genomes_project 11 68781190 68790981 + MGP_WSBEiJ_P0029151 Per1 protein_coding protein_coding MGP_WSBEiJ_T0029152.1 MGP_WSBEiJ_G0017880.1 mouse_genomes_project 11 68781541 68787329 + MGP_WSBEiJ_P0029152 Per1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029153.1 MGP_WSBEiJ_G0017880.1 mouse_genomes_project 11 68781554 68790993 + MGP_WSBEiJ_P0029153 Per1 protein_coding protein_coding MGP_WSBEiJ_T0006114.1 MGP_WSBEiJ_G0005105.1 mouse_genomes_project 11 26403103 26470700 + Gm12082 lincRNA lincRNA MGP_WSBEiJ_T0033159.1 MGP_WSBEiJ_G0018841.1 mouse_genomes_project 11 123066402 123068667 + MGP_WSBEiJ_P0033159 Chmp6 protein_coding protein_coding MGP_WSBEiJ_T0033160.1 MGP_WSBEiJ_G0018841.1 mouse_genomes_project 11 123066447 123072111 + MGP_WSBEiJ_P0033160 Chmp6 protein_coding protein_coding MGP_WSBEiJ_T0033161.1 MGP_WSBEiJ_G0018841.1 mouse_genomes_project 11 123068394 123071621 + Chmp6 protein_coding retained_intron MGP_WSBEiJ_T0033162.1 MGP_WSBEiJ_G0018841.1 mouse_genomes_project 11 123069303 123071201 + Chmp6 protein_coding retained_intron MGP_WSBEiJ_T0012468.1 MGP_WSBEiJ_G0010598.1 mouse_genomes_project 11 104094446 104094771 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012408.1 MGP_WSBEiJ_G0010538.1 mouse_genomes_project 11 77813689 77814637 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027763.1 MGP_WSBEiJ_G0017513.1 mouse_genomes_project 11 31369343 31401728 - MGP_WSBEiJ_P0027763 Gabrp protein_coding protein_coding MGP_WSBEiJ_T0027764.1 MGP_WSBEiJ_G0017513.1 mouse_genomes_project 11 31395141 31401730 - MGP_WSBEiJ_P0027764 Gabrp protein_coding protein_coding MGP_WSBEiJ_T0009548.1 MGP_WSBEiJ_G0007705.1 mouse_genomes_project 11 69391075 69391195 - Mir467f miRNA miRNA MGP_WSBEiJ_T0031844.1 MGP_WSBEiJ_G0018572.1 mouse_genomes_project 11 104011558 104026247 + MGP_WSBEiJ_P0031844 Cd300lg protein_coding protein_coding MGP_WSBEiJ_T0031845.1 MGP_WSBEiJ_G0018572.1 mouse_genomes_project 11 104011558 104026247 + MGP_WSBEiJ_P0031845 Cd300lg protein_coding protein_coding MGP_WSBEiJ_T0031846.1 MGP_WSBEiJ_G0018572.1 mouse_genomes_project 11 104011558 104020593 + MGP_WSBEiJ_P0031846 Cd300lg protein_coding protein_coding MGP_WSBEiJ_T0031847.1 MGP_WSBEiJ_G0018572.1 mouse_genomes_project 11 104011558 104026247 + MGP_WSBEiJ_P0031847 Cd300lg protein_coding protein_coding MGP_WSBEiJ_T0030849.1 MGP_WSBEiJ_G0018298.1 mouse_genomes_project 11 91540250 91702607 - MGP_WSBEiJ_P0030849 Stxbp4 protein_coding protein_coding MGP_WSBEiJ_T0030850.1 MGP_WSBEiJ_G0018298.1 mouse_genomes_project 11 91556734 91613388 - MGP_WSBEiJ_P0030850 Stxbp4 protein_coding protein_coding MGP_WSBEiJ_T0030851.1 MGP_WSBEiJ_G0018298.1 mouse_genomes_project 11 91598926 91702585 - MGP_WSBEiJ_P0030851 Stxbp4 protein_coding protein_coding MGP_WSBEiJ_T0030852.1 MGP_WSBEiJ_G0018298.1 mouse_genomes_project 11 91660425 91702588 - MGP_WSBEiJ_P0030852 Stxbp4 protein_coding protein_coding MGP_WSBEiJ_T0030853.1 MGP_WSBEiJ_G0018298.1 mouse_genomes_project 11 91665488 91702599 - MGP_WSBEiJ_P0030853 Stxbp4 protein_coding protein_coding MGP_WSBEiJ_T0030854.1 MGP_WSBEiJ_G0018298.1 mouse_genomes_project 11 91681601 91694958 - MGP_WSBEiJ_P0030854 Stxbp4 protein_coding protein_coding MGP_WSBEiJ_T0030855.1 MGP_WSBEiJ_G0018298.1 mouse_genomes_project 11 91694251 91702596 - Stxbp4 protein_coding processed_transcript MGP_WSBEiJ_T0006293.1 MGP_WSBEiJ_G0005246.1 mouse_genomes_project 11 125042325 125042527 + Gm29513 lincRNA lincRNA MGP_WSBEiJ_T0028085.1 MGP_WSBEiJ_G0017610.1 mouse_genomes_project 11 48740496 48762420 + MGP_WSBEiJ_P0028085 Mgat4b protein_coding protein_coding MGP_WSBEiJ_T0028086.1 MGP_WSBEiJ_G0017610.1 mouse_genomes_project 11 48756665 48766380 + MGP_WSBEiJ_P0028086 Mgat4b protein_coding protein_coding MGP_WSBEiJ_T0028087.1 MGP_WSBEiJ_G0017610.1 mouse_genomes_project 11 48762060 48766380 + MGP_WSBEiJ_P0028087 Mgat4b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028088.1 MGP_WSBEiJ_G0017610.1 mouse_genomes_project 11 48762068 48763044 + Mgat4b protein_coding retained_intron MGP_WSBEiJ_T0028089.1 MGP_WSBEiJ_G0017610.1 mouse_genomes_project 11 48765299 48766194 + Mgat4b protein_coding retained_intron MGP_WSBEiJ_T0032979.1 MGP_WSBEiJ_G0018803.1 mouse_genomes_project 11 120686923 120799947 + MGP_WSBEiJ_P0032979 Tnrc6c protein_coding protein_coding MGP_WSBEiJ_T0032980.1 MGP_WSBEiJ_G0018803.1 mouse_genomes_project 11 120687207 120799938 + Tnrc6c protein_coding retained_intron MGP_WSBEiJ_T0032981.1 MGP_WSBEiJ_G0018803.1 mouse_genomes_project 11 120687447 120799949 + MGP_WSBEiJ_P0032981 Tnrc6c protein_coding protein_coding MGP_WSBEiJ_T0032982.1 MGP_WSBEiJ_G0018803.1 mouse_genomes_project 11 120757330 120798791 + MGP_WSBEiJ_P0032982 Tnrc6c protein_coding protein_coding MGP_WSBEiJ_T0032983.1 MGP_WSBEiJ_G0018803.1 mouse_genomes_project 11 120778814 120785619 + Tnrc6c protein_coding retained_intron MGP_WSBEiJ_T0032984.1 MGP_WSBEiJ_G0018803.1 mouse_genomes_project 11 120785548 120787626 + Tnrc6c protein_coding retained_intron MGP_WSBEiJ_T0033120.1 MGP_WSBEiJ_G0018834.1 mouse_genomes_project 11 122416468 122467249 + MGP_WSBEiJ_P0033120 Card14 protein_coding protein_coding MGP_WSBEiJ_T0033121.1 MGP_WSBEiJ_G0018834.1 mouse_genomes_project 11 122423377 122467249 + MGP_WSBEiJ_P0033121 Card14 protein_coding protein_coding MGP_WSBEiJ_T0033122.1 MGP_WSBEiJ_G0018834.1 mouse_genomes_project 11 122427908 122467061 + Card14 protein_coding processed_transcript MGP_WSBEiJ_T0033123.1 MGP_WSBEiJ_G0018834.1 mouse_genomes_project 11 122430202 122467248 + Card14 protein_coding processed_transcript MGP_WSBEiJ_T0027666.1 MGP_WSBEiJ_G0017488.1 mouse_genomes_project 11 28641302 28664586 - MGP_WSBEiJ_P0027666 Erlec1 protein_coding protein_coding MGP_WSBEiJ_T0027667.1 MGP_WSBEiJ_G0017488.1 mouse_genomes_project 11 28642279 28658943 - MGP_WSBEiJ_P0027667 Erlec1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027668.1 MGP_WSBEiJ_G0017488.1 mouse_genomes_project 11 28645477 28658559 - MGP_WSBEiJ_P0027668 Erlec1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027669.1 MGP_WSBEiJ_G0017488.1 mouse_genomes_project 11 28653180 28658676 - Erlec1 protein_coding retained_intron MGP_WSBEiJ_T0009514.1 MGP_WSBEiJ_G0007671.1 mouse_genomes_project 11 26409129 26409201 + Mir216a miRNA miRNA MGP_WSBEiJ_T0012299.1 MGP_WSBEiJ_G0010429.1 mouse_genomes_project 11 30557351 30558309 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012239.1 MGP_WSBEiJ_G0010369.1 mouse_genomes_project 11 13811221 13812134 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029687.1 MGP_WSBEiJ_G0017994.1 mouse_genomes_project 11 72176165 72178632 + MGP_WSBEiJ_P0029687 Txndc17 protein_coding protein_coding MGP_WSBEiJ_T0029688.1 MGP_WSBEiJ_G0017994.1 mouse_genomes_project 11 72176233 72177294 + Txndc17 protein_coding retained_intron MGP_WSBEiJ_T0029836.1 MGP_WSBEiJ_G0018053.1 mouse_genomes_project 11 74461982 74462977 + MGP_WSBEiJ_P0029836 Olfr412 protein_coding protein_coding MGP_WSBEiJ_T0016574.1 MGP_WSBEiJ_G0014576.1 mouse_genomes_project 11 20447018 20454794 + Gm12059 processed_transcript processed_transcript MGP_WSBEiJ_T0016573.1 MGP_WSBEiJ_G0014575.1 mouse_genomes_project 11 20226197 20228522 + 9130230N09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0030413.1 MGP_WSBEiJ_G0018182.1 mouse_genomes_project 11 82614378 82616255 + MGP_WSBEiJ_P0030413 Ccl2 protein_coding protein_coding MGP_WSBEiJ_T0030414.1 MGP_WSBEiJ_G0018182.1 mouse_genomes_project 11 82614417 82616252 + Ccl2 protein_coding retained_intron MGP_WSBEiJ_T0031180.1 MGP_WSBEiJ_G0018379.1 mouse_genomes_project 11 98500015 98506671 - MGP_WSBEiJ_P0031180 Lrrc46 protein_coding protein_coding MGP_WSBEiJ_T0000816.1 MGP_WSBEiJ_G0000755.1 mouse_genomes_project 11 42813464 42820605 - TEC TEC MGP_WSBEiJ_T0012315.1 MGP_WSBEiJ_G0010445.1 mouse_genomes_project 11 39436368 39436912 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028248.1 MGP_WSBEiJ_G0017648.1 mouse_genomes_project 11 51058419 51067289 + 9530068E07Rik protein_coding processed_transcript MGP_WSBEiJ_T0028249.1 MGP_WSBEiJ_G0017648.1 mouse_genomes_project 11 51058419 51071780 + MGP_WSBEiJ_P0028249 9530068E07Rik protein_coding protein_coding MGP_WSBEiJ_T0028250.1 MGP_WSBEiJ_G0017648.1 mouse_genomes_project 11 51058419 51071785 + MGP_WSBEiJ_P0028250 9530068E07Rik protein_coding protein_coding MGP_WSBEiJ_T0028251.1 MGP_WSBEiJ_G0017648.1 mouse_genomes_project 11 51058637 51066320 + 9530068E07Rik protein_coding processed_transcript MGP_WSBEiJ_T0030291.1 MGP_WSBEiJ_G0018151.1 mouse_genomes_project 11 79199830 79220960 + MGP_WSBEiJ_P0030291 Lyrm9 protein_coding protein_coding MGP_WSBEiJ_T0030292.1 MGP_WSBEiJ_G0018151.1 mouse_genomes_project 11 79199850 79212349 + MGP_WSBEiJ_P0030292 Lyrm9 protein_coding protein_coding MGP_WSBEiJ_T0030293.1 MGP_WSBEiJ_G0018151.1 mouse_genomes_project 11 79199875 79213368 + Lyrm9 protein_coding processed_transcript MGP_WSBEiJ_T0003296.1 MGP_WSBEiJ_G0003040.1 mouse_genomes_project 11 123880378 123903088 - Gm17178 antisense antisense MGP_WSBEiJ_T0032355.1 MGP_WSBEiJ_G0018678.1 mouse_genomes_project 11 110066218 110131495 - MGP_WSBEiJ_P0032355 Cacng4 protein_coding protein_coding MGP_WSBEiJ_T0032356.1 MGP_WSBEiJ_G0018678.1 mouse_genomes_project 11 110069058 110075941 - Cacng4 protein_coding processed_transcript MGP_WSBEiJ_T0003095.1 MGP_WSBEiJ_G0002881.1 mouse_genomes_project 11 53644946 53650918 + Lyrm7os antisense antisense MGP_WSBEiJ_T0032576.1 MGP_WSBEiJ_G0018731.1 mouse_genomes_project 11 117993647 118055648 + MGP_WSBEiJ_P0032576 Tmem104 protein_coding protein_coding MGP_WSBEiJ_T0032577.1 MGP_WSBEiJ_G0018731.1 mouse_genomes_project 11 117993647 118055648 + MGP_WSBEiJ_P0032577 Tmem104 protein_coding protein_coding MGP_WSBEiJ_T0032578.1 MGP_WSBEiJ_G0018731.1 mouse_genomes_project 11 117993671 118003473 + Tmem104 protein_coding processed_transcript MGP_WSBEiJ_T0032579.1 MGP_WSBEiJ_G0018731.1 mouse_genomes_project 11 117993711 118054390 + Tmem104 protein_coding processed_transcript MGP_WSBEiJ_T0032098.1 MGP_WSBEiJ_G0018617.1 mouse_genomes_project 11 105445905 105494261 - MGP_WSBEiJ_P0032098 Plekhm1 protein_coding protein_coding MGP_WSBEiJ_T0032099.1 MGP_WSBEiJ_G0018617.1 mouse_genomes_project 11 105448250 105476341 - MGP_WSBEiJ_P0032099 Plekhm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003294.1 MGP_WSBEiJ_G0003038.1 mouse_genomes_project 11 123832550 123844034 + Myadml2os antisense antisense MGP_WSBEiJ_T0027268.1 MGP_WSBEiJ_G0017397.1 mouse_genomes_project 11 3606769 3614989 - MGP_WSBEiJ_P0027268 protein_coding protein_coding MGP_WSBEiJ_T0027269.1 MGP_WSBEiJ_G0017397.1 mouse_genomes_project 11 3606838 3608338 - MGP_WSBEiJ_P0027269 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027270.1 MGP_WSBEiJ_G0017397.1 mouse_genomes_project 11 3606849 3608890 - MGP_WSBEiJ_P0027270 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028291.1 MGP_WSBEiJ_G0017662.1 mouse_genomes_project 11 52303572 52337799 + MGP_WSBEiJ_P0028291 Kif3a protein_coding protein_coding MGP_WSBEiJ_T0028292.1 MGP_WSBEiJ_G0017662.1 mouse_genomes_project 11 52303572 52336941 + MGP_WSBEiJ_P0028292 Kif3a protein_coding protein_coding MGP_WSBEiJ_T0028293.1 MGP_WSBEiJ_G0017662.1 mouse_genomes_project 11 52303590 52336938 + MGP_WSBEiJ_P0028293 Kif3a protein_coding protein_coding MGP_WSBEiJ_T0028294.1 MGP_WSBEiJ_G0017662.1 mouse_genomes_project 11 52303719 52336895 + MGP_WSBEiJ_P0028294 Kif3a protein_coding protein_coding MGP_WSBEiJ_T0028295.1 MGP_WSBEiJ_G0017662.1 mouse_genomes_project 11 52303909 52315663 + Kif3a protein_coding processed_transcript MGP_WSBEiJ_T0028296.1 MGP_WSBEiJ_G0017662.1 mouse_genomes_project 11 52304054 52316288 + MGP_WSBEiJ_P0028296 Kif3a protein_coding protein_coding MGP_WSBEiJ_T0028297.1 MGP_WSBEiJ_G0017662.1 mouse_genomes_project 11 52315647 52323034 + MGP_WSBEiJ_P0028297 Kif3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028298.1 MGP_WSBEiJ_G0017662.1 mouse_genomes_project 11 52330111 52337136 + MGP_WSBEiJ_P0028298 Kif3a protein_coding protein_coding MGP_WSBEiJ_T0029340.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69678073 69680401 + Neurl4 protein_coding processed_transcript MGP_WSBEiJ_T0029341.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69678817 69690518 + MGP_WSBEiJ_P0029341 Neurl4 protein_coding protein_coding MGP_WSBEiJ_T0029342.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69678817 69690518 + MGP_WSBEiJ_P0029342 Neurl4 protein_coding protein_coding MGP_WSBEiJ_T0029343.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69678817 69690518 + MGP_WSBEiJ_P0029343 Neurl4 protein_coding protein_coding MGP_WSBEiJ_T0029344.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69678892 69690823 + MGP_WSBEiJ_P0029344 Neurl4 protein_coding protein_coding MGP_WSBEiJ_T0029345.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69679028 69682599 + Neurl4 protein_coding retained_intron MGP_WSBEiJ_T0029346.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69679157 69680916 + Neurl4 protein_coding processed_transcript MGP_WSBEiJ_T0029347.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69680393 69690334 + MGP_WSBEiJ_P0029347 Neurl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029348.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69681036 69685737 + MGP_WSBEiJ_P0029348 Neurl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029349.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69684265 69685523 + Neurl4 protein_coding retained_intron MGP_WSBEiJ_T0029350.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69685636 69687327 + Neurl4 protein_coding retained_intron MGP_WSBEiJ_T0029351.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69685977 69687868 + Neurl4 protein_coding retained_intron MGP_WSBEiJ_T0029352.1 MGP_WSBEiJ_G0017929.1 mouse_genomes_project 11 69688038 69690155 + MGP_WSBEiJ_P0029352 Neurl4 protein_coding protein_coding MGP_WSBEiJ_T0031770.1 MGP_WSBEiJ_G0018560.1 mouse_genomes_project 11 103404849 103468705 - MGP_WSBEiJ_P0031770 Brca1 protein_coding protein_coding MGP_WSBEiJ_T0031771.1 MGP_WSBEiJ_G0018560.1 mouse_genomes_project 11 103412397 103424082 - Brca1 protein_coding retained_intron MGP_WSBEiJ_T0031772.1 MGP_WSBEiJ_G0018560.1 mouse_genomes_project 11 103428408 103438426 - Brca1 protein_coding retained_intron MGP_WSBEiJ_T0031773.1 MGP_WSBEiJ_G0018560.1 mouse_genomes_project 11 103440159 103440825 - MGP_WSBEiJ_P0031773 Brca1 protein_coding protein_coding MGP_WSBEiJ_T0031774.1 MGP_WSBEiJ_G0018560.1 mouse_genomes_project 11 103440173 103441173 - Brca1 protein_coding processed_transcript MGP_WSBEiJ_T0031775.1 MGP_WSBEiJ_G0018560.1 mouse_genomes_project 11 103441473 103468781 - MGP_WSBEiJ_P0031775 Brca1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031776.1 MGP_WSBEiJ_G0018560.1 mouse_genomes_project 11 103448049 103468408 - MGP_WSBEiJ_P0031776 Brca1 protein_coding protein_coding MGP_WSBEiJ_T0026971.1 MGP_WSBEiJ_G0017330.1 mouse_genomes_project 11 338896 341564 + Selm protein_coding processed_transcript MGP_WSBEiJ_T0026972.1 MGP_WSBEiJ_G0017330.1 mouse_genomes_project 11 338914 341346 + Selm protein_coding processed_transcript MGP_WSBEiJ_T0026973.1 MGP_WSBEiJ_G0017330.1 mouse_genomes_project 11 339079 341567 + MGP_WSBEiJ_P0026973 Selm protein_coding protein_coding MGP_WSBEiJ_T0012272.1 MGP_WSBEiJ_G0010402.1 mouse_genomes_project 11 24212780 24213249 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006232.1 MGP_WSBEiJ_G0005199.1 mouse_genomes_project 11 97231720 97232733 - Gm11527 lincRNA lincRNA MGP_WSBEiJ_T0031823.1 MGP_WSBEiJ_G0018567.1 mouse_genomes_project 11 103835559 103855058 - MGP_WSBEiJ_P0031823 Meox1 protein_coding protein_coding MGP_WSBEiJ_T0009526.1 MGP_WSBEiJ_G0007683.1 mouse_genomes_project 11 48596492 48596590 + Mir340 miRNA miRNA MGP_WSBEiJ_T0011100.1 MGP_WSBEiJ_G0009257.1 mouse_genomes_project 11 14742720 14743044 + Gm23959 misc_RNA misc_RNA MGP_WSBEiJ_T0027295.1 MGP_WSBEiJ_G0017405.1 mouse_genomes_project 11 5488622 5735586 - MGP_WSBEiJ_P0027295 Tns3 protein_coding protein_coding MGP_WSBEiJ_T0027296.1 MGP_WSBEiJ_G0017405.1 mouse_genomes_project 11 5509130 5527544 - Tns3 protein_coding processed_transcript MGP_WSBEiJ_T0027297.1 MGP_WSBEiJ_G0017405.1 mouse_genomes_project 11 5596896 5604315 - Tns3 protein_coding processed_transcript MGP_WSBEiJ_T0027298.1 MGP_WSBEiJ_G0017405.1 mouse_genomes_project 11 5604628 5637628 - Tns3 protein_coding processed_transcript MGP_WSBEiJ_T0003147.1 MGP_WSBEiJ_G0002924.1 mouse_genomes_project 11 69194150 69199288 + Dnah2os antisense antisense MGP_WSBEiJ_T0098939.1 MGP_WSBEiJ_G0037602.1 mouse_genomes_project 11 78501607 78501672 - Snord42a snoRNA snoRNA MGP_WSBEiJ_T0027755.1 MGP_WSBEiJ_G0017511.1 mouse_genomes_project 11 31012675 31141038 - MGP_WSBEiJ_P0027755 Ranbp17 protein_coding unknown_likely_coding MGP_WSBEiJ_T0027756.1 MGP_WSBEiJ_G0017511.1 mouse_genomes_project 11 31012679 31327228 - MGP_WSBEiJ_P0027756 Ranbp17 protein_coding protein_coding MGP_WSBEiJ_T0027759.1 MGP_WSBEiJ_G0017511.1 mouse_genomes_project 11 31095268 31327124 - MGP_WSBEiJ_P0027759 Ranbp17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027760.1 MGP_WSBEiJ_G0017511.1 mouse_genomes_project 11 31101639 31131209 - Ranbp17 protein_coding processed_transcript MGP_WSBEiJ_T0027761.1 MGP_WSBEiJ_G0017511.1 mouse_genomes_project 11 31279333 31327112 - MGP_WSBEiJ_P0027761 Ranbp17 protein_coding protein_coding MGP_WSBEiJ_T0027762.1 MGP_WSBEiJ_G0017511.1 mouse_genomes_project 11 31296804 31326576 - MGP_WSBEiJ_P0027762 Ranbp17 protein_coding protein_coding MGP_WSBEiJ_T0029187.1 MGP_WSBEiJ_G0017890.1 mouse_genomes_project 11 69060931 69067712 + MGP_WSBEiJ_P0029187 Kcnab3 protein_coding protein_coding MGP_WSBEiJ_T0029188.1 MGP_WSBEiJ_G0017890.1 mouse_genomes_project 11 69062539 69067712 + Kcnab3 protein_coding retained_intron MGP_WSBEiJ_T0029189.1 MGP_WSBEiJ_G0017890.1 mouse_genomes_project 11 69064997 69066813 + Kcnab3 protein_coding retained_intron MGP_WSBEiJ_T0006137.1 MGP_WSBEiJ_G0005127.1 mouse_genomes_project 11 43397517 43457456 + Gm12160 lincRNA lincRNA MGP_WSBEiJ_T0031485.1 MGP_WSBEiJ_G0018472.1 mouse_genomes_project 11 101419302 101420274 - MGP_WSBEiJ_P0031485 Krtap4-6 protein_coding protein_coding MGP_WSBEiJ_T0028538.1 MGP_WSBEiJ_G0017743.1 mouse_genomes_project 11 58064188 58070937 - MGP_WSBEiJ_P0028538 protein_coding protein_coding MGP_WSBEiJ_T0012301.1 MGP_WSBEiJ_G0010431.1 mouse_genomes_project 11 30972508 30972955 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032327.1 MGP_WSBEiJ_G0018672.1 mouse_genomes_project 11 109303633 109406318 - MGP_WSBEiJ_P0032327 Bptf protein_coding protein_coding MGP_WSBEiJ_T0032328.1 MGP_WSBEiJ_G0018672.1 mouse_genomes_project 11 109303635 109406839 - MGP_WSBEiJ_P0032328 Bptf protein_coding protein_coding MGP_WSBEiJ_T0032329.1 MGP_WSBEiJ_G0018672.1 mouse_genomes_project 11 109303635 109406839 - MGP_WSBEiJ_P0032329 Bptf protein_coding protein_coding MGP_WSBEiJ_T0032330.1 MGP_WSBEiJ_G0018672.1 mouse_genomes_project 11 109306056 109314246 - Bptf protein_coding processed_transcript MGP_WSBEiJ_T0032331.1 MGP_WSBEiJ_G0018672.1 mouse_genomes_project 11 109306348 109405992 - MGP_WSBEiJ_P0032331 Bptf protein_coding unknown_likely_coding MGP_WSBEiJ_T0032332.1 MGP_WSBEiJ_G0018672.1 mouse_genomes_project 11 109313580 109317814 - Bptf protein_coding processed_transcript MGP_WSBEiJ_T0032333.1 MGP_WSBEiJ_G0018672.1 mouse_genomes_project 11 109317204 109320702 - MGP_WSBEiJ_P0032333 Bptf protein_coding protein_coding MGP_WSBEiJ_T0032334.1 MGP_WSBEiJ_G0018672.1 mouse_genomes_project 11 109328375 109336122 - MGP_WSBEiJ_P0032334 Bptf protein_coding protein_coding MGP_WSBEiJ_T0098956.1 MGP_WSBEiJ_G0037619.1 mouse_genomes_project 11 108731650 108731720 + Snord104 snoRNA snoRNA MGP_WSBEiJ_T0097703.1 MGP_WSBEiJ_G0036366.1 mouse_genomes_project 11 68756173 68756274 + Gm25371 snRNA snRNA MGP_WSBEiJ_T0032510.1 MGP_WSBEiJ_G0018714.1 mouse_genomes_project 11 117435165 117486834 + MGP_WSBEiJ_P0032510 Ttyh2 protein_coding protein_coding MGP_WSBEiJ_T0032511.1 MGP_WSBEiJ_G0018714.1 mouse_genomes_project 11 117435250 117455081 + Ttyh2 protein_coding processed_transcript MGP_WSBEiJ_T0098901.1 MGP_WSBEiJ_G0037564.1 mouse_genomes_project 11 12591833 12591963 + Gm25490 snoRNA snoRNA MGP_WSBEiJ_T0033172.1 MGP_WSBEiJ_G0018843.1 mouse_genomes_project 11 123165560 123206372 - Aatk protein_coding processed_transcript MGP_WSBEiJ_T0033173.1 MGP_WSBEiJ_G0018843.1 mouse_genomes_project 11 123165560 123170660 - Aatk protein_coding processed_transcript MGP_WSBEiJ_T0033174.1 MGP_WSBEiJ_G0018843.1 mouse_genomes_project 11 123165560 123206275 - MGP_WSBEiJ_P0033174 Aatk protein_coding protein_coding MGP_WSBEiJ_T0033175.1 MGP_WSBEiJ_G0018843.1 mouse_genomes_project 11 123167467 123182427 - MGP_WSBEiJ_P0033175 Aatk protein_coding protein_coding MGP_WSBEiJ_T0033176.1 MGP_WSBEiJ_G0018843.1 mouse_genomes_project 11 123170646 123176429 - Aatk protein_coding processed_transcript MGP_WSBEiJ_T0033177.1 MGP_WSBEiJ_G0018843.1 mouse_genomes_project 11 123171949 123176688 - Aatk protein_coding processed_transcript MGP_WSBEiJ_T0033178.1 MGP_WSBEiJ_G0018843.1 mouse_genomes_project 11 123173537 123176404 - Aatk protein_coding processed_transcript MGP_WSBEiJ_T0033179.1 MGP_WSBEiJ_G0018843.1 mouse_genomes_project 11 123176269 123179519 - Aatk protein_coding processed_transcript MGP_WSBEiJ_T0031811.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103720607 103739490 - MGP_WSBEiJ_P0031811 Etv4 protein_coding protein_coding MGP_WSBEiJ_T0031812.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103720612 103739551 - MGP_WSBEiJ_P0031812 Etv4 protein_coding protein_coding MGP_WSBEiJ_T0031813.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103720612 103739551 - MGP_WSBEiJ_P0031813 Etv4 protein_coding protein_coding MGP_WSBEiJ_T0031814.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103721216 103723043 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0031815.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103724549 103739041 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0031816.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103724688 103739438 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0031817.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103724719 103736848 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0031818.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103724938 103739402 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0031819.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103725025 103739440 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0031820.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103725025 103736745 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0031821.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103725065 103739490 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0031822.1 MGP_WSBEiJ_G0018566.1 mouse_genomes_project 11 103736612 103739028 - Etv4 protein_coding processed_transcript MGP_WSBEiJ_T0029828.1 MGP_WSBEiJ_G0018048.1 mouse_genomes_project 11 74262889 74266503 - MGP_WSBEiJ_P0029828 Olfr403 protein_coding protein_coding MGP_WSBEiJ_T0031676.1 MGP_WSBEiJ_G0018536.1 mouse_genomes_project 11 102996158 103002463 + MGP_WSBEiJ_P0031676 Tubg1 protein_coding protein_coding MGP_WSBEiJ_T0032312.1 MGP_WSBEiJ_G0018669.1 mouse_genomes_project 11 109059762 109089938 + MGP_WSBEiJ_P0032312 Cep95 protein_coding protein_coding MGP_WSBEiJ_T0032313.1 MGP_WSBEiJ_G0018669.1 mouse_genomes_project 11 109059785 109089931 + MGP_WSBEiJ_P0032313 Cep95 protein_coding protein_coding MGP_WSBEiJ_T0032314.1 MGP_WSBEiJ_G0018669.1 mouse_genomes_project 11 109059797 109061779 + Cep95 protein_coding processed_transcript MGP_WSBEiJ_T0032315.1 MGP_WSBEiJ_G0018669.1 mouse_genomes_project 11 109083355 109084917 + Cep95 protein_coding processed_transcript MGP_WSBEiJ_T0032316.1 MGP_WSBEiJ_G0018669.1 mouse_genomes_project 11 109085300 109086856 + Cep95 protein_coding processed_transcript MGP_WSBEiJ_T0032317.1 MGP_WSBEiJ_G0018669.1 mouse_genomes_project 11 109088911 109089939 + Cep95 protein_coding processed_transcript MGP_WSBEiJ_T0032318.1 MGP_WSBEiJ_G0018669.1 mouse_genomes_project 11 109088956 109091008 + MGP_WSBEiJ_P0032318 Cep95 protein_coding protein_coding MGP_WSBEiJ_T0000814.1 MGP_WSBEiJ_G0000753.1 mouse_genomes_project 11 16316093 16316949 - TEC TEC MGP_WSBEiJ_T0006159.1 MGP_WSBEiJ_G0005146.1 mouse_genomes_project 11 61162831 61165473 + Gm26964 lincRNA lincRNA MGP_WSBEiJ_T0027056.1 MGP_WSBEiJ_G0017349.1 mouse_genomes_project 11 1088913 1093098 + MGP_WSBEiJ_P0027056 Gatsl3 protein_coding protein_coding MGP_WSBEiJ_T0098950.1 MGP_WSBEiJ_G0037613.1 mouse_genomes_project 11 99299469 99299606 - Snora21 snoRNA snoRNA MGP_WSBEiJ_T0012398.1 MGP_WSBEiJ_G0010528.1 mouse_genomes_project 11 73240809 73241028 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006173.1 MGP_WSBEiJ_G0005157.1 mouse_genomes_project 11 70483744 70485462 - Gm12319 lincRNA lincRNA MGP_WSBEiJ_T0097732.1 MGP_WSBEiJ_G0036395.1 mouse_genomes_project 11 100072683 100072817 - Gm25106 snRNA snRNA MGP_WSBEiJ_T0027478.1 MGP_WSBEiJ_G0017447.1 mouse_genomes_project 11 19857647 19866944 + MGP_WSBEiJ_P0027478 Tmem17 protein_coding protein_coding MGP_WSBEiJ_T0030675.1 MGP_WSBEiJ_G0018252.1 mouse_genomes_project 11 87413178 87517182 - MGP_WSBEiJ_P0030675 Vmp1 protein_coding protein_coding MGP_WSBEiJ_T0030676.1 MGP_WSBEiJ_G0018252.1 mouse_genomes_project 11 87414243 87431908 - Vmp1 protein_coding processed_transcript MGP_WSBEiJ_T0030677.1 MGP_WSBEiJ_G0018252.1 mouse_genomes_project 11 87414333 87416289 - Vmp1 protein_coding processed_transcript MGP_WSBEiJ_T0030678.1 MGP_WSBEiJ_G0018252.1 mouse_genomes_project 11 87414578 87416176 - Vmp1 protein_coding processed_transcript MGP_WSBEiJ_T0030679.1 MGP_WSBEiJ_G0018252.1 mouse_genomes_project 11 87414581 87431940 - Vmp1 protein_coding processed_transcript MGP_WSBEiJ_T0030680.1 MGP_WSBEiJ_G0018252.1 mouse_genomes_project 11 87475932 87496357 - Vmp1 protein_coding processed_transcript MGP_WSBEiJ_T0030681.1 MGP_WSBEiJ_G0018252.1 mouse_genomes_project 11 87497337 87517167 - Vmp1 protein_coding processed_transcript MGP_WSBEiJ_T0030682.1 MGP_WSBEiJ_G0018252.1 mouse_genomes_project 11 87497437 87503993 - MGP_WSBEiJ_P0030682 Vmp1 protein_coding protein_coding MGP_WSBEiJ_T0009528.1 MGP_WSBEiJ_G0007685.1 mouse_genomes_project 11 48891881 48891976 - Mir804 miRNA miRNA MGP_WSBEiJ_T0029208.1 MGP_WSBEiJ_G0017895.1 mouse_genomes_project 11 69136578 69138293 - MGP_WSBEiJ_P0029208 Tmem88 protein_coding protein_coding MGP_WSBEiJ_T0027757.1 MGP_WSBEiJ_G0017512.1 mouse_genomes_project 11 31074469 31075449 - Gm12117 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0027758.1 MGP_WSBEiJ_G0017512.1 mouse_genomes_project 11 31074590 31075046 - MGP_WSBEiJ_P0027758 Gm12117 protein_coding protein_coding MGP_WSBEiJ_T0027078.1 MGP_WSBEiJ_G0017356.1 mouse_genomes_project 11 1603413 1605764 - MGP_WSBEiJ_P0027078 Uqcr10 protein_coding protein_coding MGP_WSBEiJ_T0027079.1 MGP_WSBEiJ_G0017356.1 mouse_genomes_project 11 1603415 1605756 - Uqcr10 protein_coding processed_transcript MGP_WSBEiJ_T0027080.1 MGP_WSBEiJ_G0017356.1 mouse_genomes_project 11 1603422 1605475 - Uqcr10 protein_coding processed_transcript MGP_WSBEiJ_T0012297.1 MGP_WSBEiJ_G0010427.1 mouse_genomes_project 11 28828427 28829206 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012328.1 MGP_WSBEiJ_G0010458.1 mouse_genomes_project 11 46897829 46898490 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016606.1 MGP_WSBEiJ_G0014594.1 mouse_genomes_project 11 65682566 65815556 + Gm12296 processed_transcript processed_transcript MGP_WSBEiJ_T0006089.1 MGP_WSBEiJ_G0005084.1 mouse_genomes_project 11 16269077 16279339 + 4933406G16Rik lincRNA lincRNA MGP_WSBEiJ_T0029306.1 MGP_WSBEiJ_G0017921.1 mouse_genomes_project 11 69594041 69605760 - MGP_WSBEiJ_P0029306 Nlgn2 protein_coding protein_coding MGP_WSBEiJ_T0029307.1 MGP_WSBEiJ_G0017921.1 mouse_genomes_project 11 69594041 69608691 - MGP_WSBEiJ_P0029307 Nlgn2 protein_coding protein_coding MGP_WSBEiJ_T0029308.1 MGP_WSBEiJ_G0017921.1 mouse_genomes_project 11 69598644 69605170 - MGP_WSBEiJ_P0029308 Nlgn2 protein_coding protein_coding MGP_WSBEiJ_T0029309.1 MGP_WSBEiJ_G0017921.1 mouse_genomes_project 11 69598949 69599465 - Nlgn2 protein_coding retained_intron MGP_WSBEiJ_T0030874.1 MGP_WSBEiJ_G0018303.1 mouse_genomes_project 11 95023940 95055290 - Utp18 protein_coding processed_transcript MGP_WSBEiJ_T0030875.1 MGP_WSBEiJ_G0018303.1 mouse_genomes_project 11 95023940 95055290 - MGP_WSBEiJ_P0030875 Utp18 protein_coding protein_coding MGP_WSBEiJ_T0030876.1 MGP_WSBEiJ_G0018303.1 mouse_genomes_project 11 95043715 95044476 - Utp18 protein_coding processed_transcript MGP_WSBEiJ_T0033484.1 MGP_WSBEiJ_G0018907.1 mouse_genomes_project 11 124834460 124893594 - MGP_WSBEiJ_P0033484 B3gntl1 protein_coding protein_coding MGP_WSBEiJ_T0033485.1 MGP_WSBEiJ_G0018907.1 mouse_genomes_project 11 124845593 124893594 - MGP_WSBEiJ_P0033485 B3gntl1 protein_coding protein_coding MGP_WSBEiJ_T0100488.1 MGP_WSBEiJ_G0038947.1 mouse_genomes_project 11 84386027 84386171 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012485.1 MGP_WSBEiJ_G0010615.1 mouse_genomes_project 11 109456637 109456970 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031293.1 MGP_WSBEiJ_G0018406.1 mouse_genomes_project 11 99544497 99570791 - MGP_WSBEiJ_P0031293 Cacnb1 protein_coding protein_coding MGP_WSBEiJ_T0031294.1 MGP_WSBEiJ_G0018406.1 mouse_genomes_project 11 99545890 99570788 - MGP_WSBEiJ_P0031294 Cacnb1 protein_coding protein_coding MGP_WSBEiJ_T0031295.1 MGP_WSBEiJ_G0018406.1 mouse_genomes_project 11 99547714 99566580 - MGP_WSBEiJ_P0031295 Cacnb1 protein_coding protein_coding MGP_WSBEiJ_T0031296.1 MGP_WSBEiJ_G0018406.1 mouse_genomes_project 11 99547892 99570791 - MGP_WSBEiJ_P0031296 Cacnb1 protein_coding protein_coding MGP_WSBEiJ_T0031297.1 MGP_WSBEiJ_G0018406.1 mouse_genomes_project 11 99547892 99570791 - MGP_WSBEiJ_P0031297 Cacnb1 protein_coding protein_coding MGP_WSBEiJ_T0031298.1 MGP_WSBEiJ_G0018406.1 mouse_genomes_project 11 99552573 99571189 - Cacnb1 protein_coding processed_transcript MGP_WSBEiJ_T0031299.1 MGP_WSBEiJ_G0018406.1 mouse_genomes_project 11 99552608 99557531 - Cacnb1 protein_coding processed_transcript MGP_WSBEiJ_T0012236.1 MGP_WSBEiJ_G0010366.1 mouse_genomes_project 11 12623038 12631597 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097740.1 MGP_WSBEiJ_G0036403.1 mouse_genomes_project 11 108392034 108392178 - Gm25556 snRNA snRNA MGP_WSBEiJ_T0100494.1 MGP_WSBEiJ_G0038953.1 mouse_genomes_project 11 96060888 96061603 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0027344.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 8941984 9033213 - MGP_WSBEiJ_P0027344 Ddc protein_coding protein_coding MGP_WSBEiJ_T0027345.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 8941986 9033146 - MGP_WSBEiJ_P0027345 Ddc protein_coding protein_coding MGP_WSBEiJ_T0027346.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 8941988 8950823 - Ddc protein_coding processed_transcript MGP_WSBEiJ_T0027347.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 8941988 9024375 - MGP_WSBEiJ_P0027347 Ddc protein_coding protein_coding MGP_WSBEiJ_T0027348.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 8947272 8965512 - Ddc protein_coding processed_transcript MGP_WSBEiJ_T0027349.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 8974230 8994983 - Ddc protein_coding processed_transcript MGP_WSBEiJ_T0027350.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 8975881 9024336 - MGP_WSBEiJ_P0027350 Ddc protein_coding protein_coding MGP_WSBEiJ_T0027351.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 8991750 9024368 - Ddc protein_coding processed_transcript MGP_WSBEiJ_T0027352.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 9005679 9014625 - Ddc protein_coding processed_transcript MGP_WSBEiJ_T0027353.1 MGP_WSBEiJ_G0017417.1 mouse_genomes_project 11 9007619 9024365 - Ddc protein_coding processed_transcript MGP_WSBEiJ_T0032013.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104888751 104932573 - MGP_WSBEiJ_P0032013 Eftud2 protein_coding protein_coding MGP_WSBEiJ_T0032014.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104888751 104932591 - MGP_WSBEiJ_P0032014 Eftud2 protein_coding protein_coding MGP_WSBEiJ_T0032015.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104888755 104894476 - MGP_WSBEiJ_P0032015 Eftud2 protein_coding protein_coding MGP_WSBEiJ_T0032016.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104889071 104929313 - MGP_WSBEiJ_P0032016 Eftud2 protein_coding protein_coding MGP_WSBEiJ_T0032017.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104889108 104891494 - MGP_WSBEiJ_P0032017 Eftud2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032018.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104889720 104890948 - Eftud2 protein_coding retained_intron MGP_WSBEiJ_T0032019.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104890480 104898238 - Eftud2 protein_coding retained_intron MGP_WSBEiJ_T0032020.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104899452 104912311 - Eftud2 protein_coding retained_intron MGP_WSBEiJ_T0032021.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104914700 104929289 - MGP_WSBEiJ_P0032021 Eftud2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032022.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104915909 104918013 - Eftud2 protein_coding retained_intron MGP_WSBEiJ_T0032023.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104917905 104932570 - Eftud2 protein_coding retained_intron MGP_WSBEiJ_T0032024.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104922090 104929314 - Eftud2 protein_coding retained_intron MGP_WSBEiJ_T0032025.1 MGP_WSBEiJ_G0018600.1 mouse_genomes_project 11 104928562 104932541 - Eftud2 protein_coding retained_intron MGP_WSBEiJ_T0028514.1 MGP_WSBEiJ_G0017728.1 mouse_genomes_project 11 57682791 57683763 - MGP_WSBEiJ_P0028514 Olfr323 protein_coding protein_coding MGP_WSBEiJ_T0028515.1 MGP_WSBEiJ_G0017728.1 mouse_genomes_project 11 57682791 57683760 - MGP_WSBEiJ_P0028515 Olfr323 protein_coding protein_coding MGP_WSBEiJ_T0012248.1 MGP_WSBEiJ_G0010378.1 mouse_genomes_project 11 16570641 16570785 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032238.1 MGP_WSBEiJ_G0018653.1 mouse_genomes_project 11 108425238 108458816 + MGP_WSBEiJ_P0032238 Ddx42 protein_coding protein_coding MGP_WSBEiJ_T0032239.1 MGP_WSBEiJ_G0018653.1 mouse_genomes_project 11 108446155 108447393 + Ddx42 protein_coding processed_transcript MGP_WSBEiJ_T0028309.1 MGP_WSBEiJ_G0017666.1 mouse_genomes_project 11 52460658 52464940 + MGP_WSBEiJ_P0028309 Il5 protein_coding protein_coding MGP_WSBEiJ_T0012305.1 MGP_WSBEiJ_G0010435.1 mouse_genomes_project 11 33707665 33708344 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027945.1 MGP_WSBEiJ_G0017567.1 mouse_genomes_project 11 44937282 44993298 - MGP_WSBEiJ_P0027945 Timd2 protein_coding protein_coding MGP_WSBEiJ_T0027946.1 MGP_WSBEiJ_G0017567.1 mouse_genomes_project 11 44972961 45012198 - MGP_WSBEiJ_P0027946 Timd2 protein_coding protein_coding MGP_WSBEiJ_T0027947.1 MGP_WSBEiJ_G0017567.1 mouse_genomes_project 11 44972961 45003002 - MGP_WSBEiJ_P0027947 Timd2 protein_coding protein_coding MGP_WSBEiJ_T0027948.1 MGP_WSBEiJ_G0017567.1 mouse_genomes_project 11 44989966 45012200 - MGP_WSBEiJ_P0027948 Timd2 protein_coding protein_coding MGP_WSBEiJ_T0028509.1 MGP_WSBEiJ_G0017725.1 mouse_genomes_project 11 57618386 57619413 - MGP_WSBEiJ_P0028509 Olfr224 protein_coding protein_coding MGP_WSBEiJ_T0031007.1 MGP_WSBEiJ_G0018333.1 mouse_genomes_project 11 96349869 96364987 - MGP_WSBEiJ_P0031007 Pdk2 protein_coding protein_coding MGP_WSBEiJ_T0031008.1 MGP_WSBEiJ_G0018333.1 mouse_genomes_project 11 96350565 96352188 - Pdk2 protein_coding processed_transcript MGP_WSBEiJ_T0031009.1 MGP_WSBEiJ_G0018333.1 mouse_genomes_project 11 96352339 96353036 - Pdk2 protein_coding processed_transcript MGP_WSBEiJ_T0031010.1 MGP_WSBEiJ_G0018333.1 mouse_genomes_project 11 96353265 96364191 - Pdk2 protein_coding processed_transcript MGP_WSBEiJ_T0031011.1 MGP_WSBEiJ_G0018333.1 mouse_genomes_project 11 96355532 96364508 - Pdk2 protein_coding processed_transcript MGP_WSBEiJ_T0027812.1 MGP_WSBEiJ_G0017528.1 mouse_genomes_project 11 38749292 38764383 - MGP_WSBEiJ_P0027812 Mat2b protein_coding protein_coding MGP_WSBEiJ_T0027813.1 MGP_WSBEiJ_G0017528.1 mouse_genomes_project 11 38749292 38767504 - MGP_WSBEiJ_P0027813 Mat2b protein_coding protein_coding MGP_WSBEiJ_T0027814.1 MGP_WSBEiJ_G0017528.1 mouse_genomes_project 11 38750634 38764230 - MGP_WSBEiJ_P0027814 Mat2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027815.1 MGP_WSBEiJ_G0017528.1 mouse_genomes_project 11 38750688 38755202 - Mat2b protein_coding retained_intron MGP_WSBEiJ_T0027816.1 MGP_WSBEiJ_G0017528.1 mouse_genomes_project 11 38754670 38755792 - Mat2b protein_coding retained_intron MGP_WSBEiJ_T0027817.1 MGP_WSBEiJ_G0017528.1 mouse_genomes_project 11 38755460 38764237 - Mat2b protein_coding retained_intron MGP_WSBEiJ_T0027818.1 MGP_WSBEiJ_G0017528.1 mouse_genomes_project 11 38757312 38767288 - Mat2b protein_coding retained_intron MGP_WSBEiJ_T0097726.1 MGP_WSBEiJ_G0036389.1 mouse_genomes_project 11 90088578 90088682 - Gm22534 snRNA snRNA MGP_WSBEiJ_T0027471.1 MGP_WSBEiJ_G0017446.1 mouse_genomes_project 11 19336129 19628636 - MGP_WSBEiJ_P0027471 Ehbp1 protein_coding protein_coding MGP_WSBEiJ_T0027472.1 MGP_WSBEiJ_G0017446.1 mouse_genomes_project 11 19336131 19627679 - MGP_WSBEiJ_P0027472 Ehbp1 protein_coding protein_coding MGP_WSBEiJ_T0027473.1 MGP_WSBEiJ_G0017446.1 mouse_genomes_project 11 19336131 19628636 - MGP_WSBEiJ_P0027473 Ehbp1 protein_coding protein_coding MGP_WSBEiJ_T0027474.1 MGP_WSBEiJ_G0017446.1 mouse_genomes_project 11 19443488 19506813 - Ehbp1 protein_coding processed_transcript MGP_WSBEiJ_T0027475.1 MGP_WSBEiJ_G0017446.1 mouse_genomes_project 11 19480353 19627713 - MGP_WSBEiJ_P0027475 Ehbp1 protein_coding protein_coding MGP_WSBEiJ_T0027476.1 MGP_WSBEiJ_G0017446.1 mouse_genomes_project 11 19502843 19505217 - Ehbp1 protein_coding processed_transcript MGP_WSBEiJ_T0027477.1 MGP_WSBEiJ_G0017446.1 mouse_genomes_project 11 19567265 19690457 - Ehbp1 protein_coding processed_transcript MGP_WSBEiJ_T0011098.1 MGP_WSBEiJ_G0009255.1 mouse_genomes_project 11 482876 482964 - Gm27937 misc_RNA misc_RNA MGP_WSBEiJ_T0012380.1 MGP_WSBEiJ_G0010510.1 mouse_genomes_project 11 64648396 64648988 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029115.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68693776 68717023 + MGP_WSBEiJ_P0029115 Ctc1 protein_coding protein_coding MGP_WSBEiJ_T0029116.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68693782 68717021 + MGP_WSBEiJ_P0029116 Ctc1 protein_coding protein_coding MGP_WSBEiJ_T0029117.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68693797 68703716 + Ctc1 protein_coding retained_intron MGP_WSBEiJ_T0029118.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68693957 68717021 + MGP_WSBEiJ_P0029118 Ctc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029119.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68694005 68701320 + Ctc1 protein_coding processed_transcript MGP_WSBEiJ_T0029120.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68706233 68707758 + Ctc1 protein_coding retained_intron MGP_WSBEiJ_T0029121.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68707619 68710115 + Ctc1 protein_coding processed_transcript MGP_WSBEiJ_T0029122.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68709795 68715496 + Ctc1 protein_coding processed_transcript MGP_WSBEiJ_T0029123.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68714422 68716369 + Ctc1 protein_coding retained_intron MGP_WSBEiJ_T0029124.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68715068 68716354 + Ctc1 protein_coding retained_intron MGP_WSBEiJ_T0029125.1 MGP_WSBEiJ_G0017875.1 mouse_genomes_project 11 68715426 68716728 + Ctc1 protein_coding retained_intron MGP_WSBEiJ_T0006102.1 MGP_WSBEiJ_G0005097.1 mouse_genomes_project 11 21634578 21650732 + Gm12066 lincRNA lincRNA MGP_WSBEiJ_T0009612.1 MGP_WSBEiJ_G0007769.1 mouse_genomes_project 11 109967468 109967526 + Mir6932 miRNA miRNA MGP_WSBEiJ_T0012325.1 MGP_WSBEiJ_G0010455.1 mouse_genomes_project 11 44851255 44851832 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033281.1 MGP_WSBEiJ_G0018864.1 mouse_genomes_project 11 123728388 123729542 - MGP_WSBEiJ_P0033281 Ppp1r27 protein_coding protein_coding MGP_WSBEiJ_T0030685.1 MGP_WSBEiJ_G0018254.1 mouse_genomes_project 11 87529690 87596700 - MGP_WSBEiJ_P0030685 Cltc protein_coding protein_coding MGP_WSBEiJ_T0030686.1 MGP_WSBEiJ_G0018254.1 mouse_genomes_project 11 87529994 87596636 - MGP_WSBEiJ_P0030686 Cltc protein_coding protein_coding MGP_WSBEiJ_T0030687.1 MGP_WSBEiJ_G0018254.1 mouse_genomes_project 11 87530657 87539048 - MGP_WSBEiJ_P0030687 Cltc protein_coding protein_coding MGP_WSBEiJ_T0030688.1 MGP_WSBEiJ_G0018254.1 mouse_genomes_project 11 87536289 87537782 - Cltc protein_coding processed_transcript MGP_WSBEiJ_T0030689.1 MGP_WSBEiJ_G0018254.1 mouse_genomes_project 11 87559411 87562644 - Cltc protein_coding retained_intron MGP_WSBEiJ_T0030690.1 MGP_WSBEiJ_G0018254.1 mouse_genomes_project 11 87560359 87562613 - Cltc protein_coding processed_transcript MGP_WSBEiJ_T0028796.1 MGP_WSBEiJ_G0017803.1 mouse_genomes_project 11 60783048 60790841 + MGP_WSBEiJ_P0028796 B9d1 protein_coding protein_coding MGP_WSBEiJ_T0028797.1 MGP_WSBEiJ_G0017803.1 mouse_genomes_project 11 60783107 60790841 + B9d1 protein_coding processed_transcript MGP_WSBEiJ_T0028798.1 MGP_WSBEiJ_G0017803.1 mouse_genomes_project 11 60783156 60786333 + B9d1 protein_coding processed_transcript MGP_WSBEiJ_T0028799.1 MGP_WSBEiJ_G0017803.1 mouse_genomes_project 11 60783159 60790841 + B9d1 protein_coding processed_transcript MGP_WSBEiJ_T0028800.1 MGP_WSBEiJ_G0017803.1 mouse_genomes_project 11 60787020 60790841 + MGP_WSBEiJ_P0028800 B9d1 protein_coding protein_coding MGP_WSBEiJ_T0028801.1 MGP_WSBEiJ_G0017803.1 mouse_genomes_project 11 60790224 60790841 + B9d1 protein_coding processed_transcript MGP_WSBEiJ_T0003052.1 MGP_WSBEiJ_G0002843.1 mouse_genomes_project 11 9432445 9457827 + Gm12002 antisense antisense MGP_WSBEiJ_T0003053.1 MGP_WSBEiJ_G0002843.1 mouse_genomes_project 11 9432464 9455218 + Gm12002 antisense antisense MGP_WSBEiJ_T0003054.1 MGP_WSBEiJ_G0002843.1 mouse_genomes_project 11 9440203 9470932 + Gm12002 antisense antisense MGP_WSBEiJ_T0030819.1 MGP_WSBEiJ_G0018286.1 mouse_genomes_project 11 89952018 89963683 - MGP_WSBEiJ_P0030819 Gm15698 protein_coding protein_coding MGP_WSBEiJ_T0032801.1 MGP_WSBEiJ_G0018771.1 mouse_genomes_project 11 119008623 119018554 - MGP_WSBEiJ_P0032801 Trim65 protein_coding protein_coding MGP_WSBEiJ_T0032802.1 MGP_WSBEiJ_G0018771.1 mouse_genomes_project 11 119011212 119018558 - Trim65 protein_coding processed_transcript MGP_WSBEiJ_T0032803.1 MGP_WSBEiJ_G0018771.1 mouse_genomes_project 11 119011212 119018556 - MGP_WSBEiJ_P0032803 Trim65 protein_coding protein_coding MGP_WSBEiJ_T0016620.1 MGP_WSBEiJ_G0014603.1 mouse_genomes_project 11 75974590 76007612 + Gm12339 processed_transcript antisense MGP_WSBEiJ_T0016621.1 MGP_WSBEiJ_G0014603.1 mouse_genomes_project 11 75975042 76007630 + Gm12339 processed_transcript processed_transcript MGP_WSBEiJ_T0027096.1 MGP_WSBEiJ_G0017360.1 mouse_genomes_project 11 1787371 1808321 + MGP_WSBEiJ_P0027096 Nipsnap1 protein_coding protein_coding MGP_WSBEiJ_T0027097.1 MGP_WSBEiJ_G0017360.1 mouse_genomes_project 11 1787419 1807738 + MGP_WSBEiJ_P0027097 Nipsnap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027098.1 MGP_WSBEiJ_G0017360.1 mouse_genomes_project 11 1787425 1798917 + Nipsnap1 protein_coding processed_transcript MGP_WSBEiJ_T0027099.1 MGP_WSBEiJ_G0017360.1 mouse_genomes_project 11 1797702 1803268 + MGP_WSBEiJ_P0027099 Nipsnap1 protein_coding protein_coding MGP_WSBEiJ_T0027100.1 MGP_WSBEiJ_G0017360.1 mouse_genomes_project 11 1797714 1804110 + Nipsnap1 protein_coding processed_transcript MGP_WSBEiJ_T0027101.1 MGP_WSBEiJ_G0017360.1 mouse_genomes_project 11 1797772 1798629 + Nipsnap1 protein_coding processed_transcript MGP_WSBEiJ_T0028067.1 MGP_WSBEiJ_G0017607.1 mouse_genomes_project 11 48658859 48699911 + MGP_WSBEiJ_P0028067 Tbc1d9b protein_coding protein_coding MGP_WSBEiJ_T0028068.1 MGP_WSBEiJ_G0017607.1 mouse_genomes_project 11 48658859 48700666 + MGP_WSBEiJ_P0028068 Tbc1d9b protein_coding protein_coding MGP_WSBEiJ_T0028069.1 MGP_WSBEiJ_G0017607.1 mouse_genomes_project 11 48658865 48668934 + Tbc1d9b protein_coding processed_transcript MGP_WSBEiJ_T0028070.1 MGP_WSBEiJ_G0017607.1 mouse_genomes_project 11 48663902 48669044 + Tbc1d9b protein_coding processed_transcript MGP_WSBEiJ_T0028071.1 MGP_WSBEiJ_G0017607.1 mouse_genomes_project 11 48673658 48678661 + Tbc1d9b protein_coding processed_transcript MGP_WSBEiJ_T0028072.1 MGP_WSBEiJ_G0017607.1 mouse_genomes_project 11 48675047 48679896 + Tbc1d9b protein_coding processed_transcript MGP_WSBEiJ_T0028073.1 MGP_WSBEiJ_G0017607.1 mouse_genomes_project 11 48676586 48678420 + Tbc1d9b protein_coding processed_transcript MGP_WSBEiJ_T0028074.1 MGP_WSBEiJ_G0017607.1 mouse_genomes_project 11 48690116 48692549 + Tbc1d9b protein_coding processed_transcript MGP_WSBEiJ_T0028256.1 MGP_WSBEiJ_G0017651.1 mouse_genomes_project 11 52038320 52046923 + MGP_WSBEiJ_P0028256 Zcchc10 protein_coding protein_coding MGP_WSBEiJ_T0028257.1 MGP_WSBEiJ_G0017651.1 mouse_genomes_project 11 52041041 52046101 + MGP_WSBEiJ_P0028257 Zcchc10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029973.1 MGP_WSBEiJ_G0018082.1 mouse_genomes_project 11 75910036 75944374 + MGP_WSBEiJ_P0029973 Ywhae protein_coding protein_coding MGP_WSBEiJ_T0029974.1 MGP_WSBEiJ_G0018082.1 mouse_genomes_project 11 75910080 75943146 + MGP_WSBEiJ_P0029974 Ywhae protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029975.1 MGP_WSBEiJ_G0018082.1 mouse_genomes_project 11 75910128 75935319 + Ywhae protein_coding retained_intron MGP_WSBEiJ_T0029976.1 MGP_WSBEiJ_G0018082.1 mouse_genomes_project 11 75910315 75935075 + MGP_WSBEiJ_P0029976 Ywhae protein_coding protein_coding MGP_WSBEiJ_T0029977.1 MGP_WSBEiJ_G0018082.1 mouse_genomes_project 11 75929817 75937519 + Ywhae protein_coding retained_intron MGP_WSBEiJ_T0003192.1 MGP_WSBEiJ_G0002958.1 mouse_genomes_project 11 96649586 96665683 + Gm11520 antisense antisense MGP_WSBEiJ_T0028519.1 MGP_WSBEiJ_G0017732.1 mouse_genomes_project 11 57752315 57753347 + MGP_WSBEiJ_P0028519 protein_coding protein_coding MGP_WSBEiJ_T0027819.1 MGP_WSBEiJ_G0017529.1 mouse_genomes_project 11 38774593 38808482 - MGP_WSBEiJ_P0027819 Hmmr protein_coding protein_coding MGP_WSBEiJ_T0027820.1 MGP_WSBEiJ_G0017529.1 mouse_genomes_project 11 38794009 38808476 - Hmmr protein_coding processed_transcript MGP_WSBEiJ_T0027821.1 MGP_WSBEiJ_G0017529.1 mouse_genomes_project 11 38795972 38808476 - Hmmr protein_coding processed_transcript MGP_WSBEiJ_T0027822.1 MGP_WSBEiJ_G0017529.1 mouse_genomes_project 11 38797825 38808451 - Hmmr protein_coding processed_transcript MGP_WSBEiJ_T0031741.1 MGP_WSBEiJ_G0018549.1 mouse_genomes_project 11 103218029 103222632 + MGP_WSBEiJ_P0031741 Aoc2 protein_coding protein_coding MGP_WSBEiJ_T0031742.1 MGP_WSBEiJ_G0018549.1 mouse_genomes_project 11 103218053 103222424 + MGP_WSBEiJ_P0031742 Aoc2 protein_coding protein_coding MGP_WSBEiJ_T0003158.1 MGP_WSBEiJ_G0002933.1 mouse_genomes_project 11 78742291 78753464 + Slc13a2os antisense antisense MGP_WSBEiJ_T0096913.1 MGP_WSBEiJ_G0035594.1 mouse_genomes_project 11 67646404 67646530 + Gm26157 rRNA rRNA MGP_WSBEiJ_T0031458.1 MGP_WSBEiJ_G0018447.1 mouse_genomes_project 11 101076568 101083832 - MGP_WSBEiJ_P0031458 Krt27 protein_coding protein_coding MGP_WSBEiJ_T0033285.1 MGP_WSBEiJ_G0018866.1 mouse_genomes_project 11 123760218 123763739 - MGP_WSBEiJ_P0033285 Arhgdia protein_coding protein_coding MGP_WSBEiJ_T0033286.1 MGP_WSBEiJ_G0018866.1 mouse_genomes_project 11 123760223 123763495 - MGP_WSBEiJ_P0033286 Arhgdia protein_coding protein_coding MGP_WSBEiJ_T0028319.1 MGP_WSBEiJ_G0017668.1 mouse_genomes_project 11 52523435 52526318 - MGP_WSBEiJ_P0028319 Gm17334 protein_coding protein_coding MGP_WSBEiJ_T0027292.1 MGP_WSBEiJ_G0017403.1 mouse_genomes_project 11 4232807 4237572 + MGP_WSBEiJ_P0027292 Igfbp1 protein_coding protein_coding MGP_WSBEiJ_T0029816.1 MGP_WSBEiJ_G0018040.1 mouse_genomes_project 11 74010200 74011240 + MGP_WSBEiJ_P0029816 Olfr23 protein_coding protein_coding MGP_WSBEiJ_T0003117.1 MGP_WSBEiJ_G0002899.1 mouse_genomes_project 11 60805651 60806473 + Gm12272 antisense antisense MGP_WSBEiJ_T0009561.1 MGP_WSBEiJ_G0007718.1 mouse_genomes_project 11 72952884 72952968 + Gm44467 miRNA miRNA MGP_WSBEiJ_T0031403.1 MGP_WSBEiJ_G0018432.1 mouse_genomes_project 11 100477416 100510576 + MGP_WSBEiJ_P0031403 Casc3 protein_coding protein_coding MGP_WSBEiJ_T0031404.1 MGP_WSBEiJ_G0018432.1 mouse_genomes_project 11 100484389 100510568 + MGP_WSBEiJ_P0031404 Casc3 protein_coding protein_coding MGP_WSBEiJ_T0031405.1 MGP_WSBEiJ_G0018432.1 mouse_genomes_project 11 100484731 100485510 + Casc3 protein_coding processed_transcript MGP_WSBEiJ_T0031406.1 MGP_WSBEiJ_G0018432.1 mouse_genomes_project 11 100484742 100499523 + Casc3 protein_coding processed_transcript MGP_WSBEiJ_T0027657.1 MGP_WSBEiJ_G0017485.1 mouse_genomes_project 11 28470503 28585993 + MGP_WSBEiJ_P0027657 Psme4 protein_coding protein_coding MGP_WSBEiJ_T0027658.1 MGP_WSBEiJ_G0017485.1 mouse_genomes_project 11 28471099 28506902 + MGP_WSBEiJ_P0027658 Psme4 protein_coding protein_coding MGP_WSBEiJ_T0027659.1 MGP_WSBEiJ_G0017485.1 mouse_genomes_project 11 28514072 28516238 + Psme4 protein_coding processed_transcript MGP_WSBEiJ_T0027660.1 MGP_WSBEiJ_G0017485.1 mouse_genomes_project 11 28532631 28536730 + Psme4 protein_coding processed_transcript MGP_WSBEiJ_T0027661.1 MGP_WSBEiJ_G0017485.1 mouse_genomes_project 11 28534910 28535579 + Psme4 protein_coding processed_transcript MGP_WSBEiJ_T0027662.1 MGP_WSBEiJ_G0017485.1 mouse_genomes_project 11 28558624 28564373 + MGP_WSBEiJ_P0027662 Psme4 protein_coding protein_coding MGP_WSBEiJ_T0027663.1 MGP_WSBEiJ_G0017485.1 mouse_genomes_project 11 28572693 28579761 + Psme4 protein_coding processed_transcript MGP_WSBEiJ_T0003264.1 MGP_WSBEiJ_G0003017.1 mouse_genomes_project 11 116904095 116906622 - antisense antisense MGP_WSBEiJ_T0003265.1 MGP_WSBEiJ_G0003017.1 mouse_genomes_project 11 116905817 116906519 - antisense antisense MGP_WSBEiJ_T0012212.1 MGP_WSBEiJ_G0010342.1 mouse_genomes_project 11 2434270 2434525 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032423.1 MGP_WSBEiJ_G0018693.1 mouse_genomes_project 11 112063621 112068178 + Prkar1a protein_coding processed_transcript MGP_WSBEiJ_T0032424.1 MGP_WSBEiJ_G0018693.1 mouse_genomes_project 11 112063621 112083538 + MGP_WSBEiJ_P0032424 Prkar1a protein_coding protein_coding MGP_WSBEiJ_T0032425.1 MGP_WSBEiJ_G0018693.1 mouse_genomes_project 11 112064791 112075638 + MGP_WSBEiJ_P0032425 Prkar1a protein_coding protein_coding MGP_WSBEiJ_T0032426.1 MGP_WSBEiJ_G0018693.1 mouse_genomes_project 11 112065137 112083538 + MGP_WSBEiJ_P0032426 Prkar1a protein_coding protein_coding MGP_WSBEiJ_T0032427.1 MGP_WSBEiJ_G0018693.1 mouse_genomes_project 11 112079825 112080858 + Prkar1a protein_coding processed_transcript MGP_WSBEiJ_T0030281.1 MGP_WSBEiJ_G0018147.1 mouse_genomes_project 11 78892037 78897438 + MGP_WSBEiJ_P0030281 Ift20 protein_coding protein_coding MGP_WSBEiJ_T0030282.1 MGP_WSBEiJ_G0018147.1 mouse_genomes_project 11 78892104 78897053 + MGP_WSBEiJ_P0030282 Ift20 protein_coding protein_coding MGP_WSBEiJ_T0030283.1 MGP_WSBEiJ_G0018147.1 mouse_genomes_project 11 78892119 78897160 + MGP_WSBEiJ_P0030283 Ift20 protein_coding protein_coding MGP_WSBEiJ_T0030284.1 MGP_WSBEiJ_G0018147.1 mouse_genomes_project 11 78892121 78897160 + Ift20 protein_coding retained_intron MGP_WSBEiJ_T0030285.1 MGP_WSBEiJ_G0018147.1 mouse_genomes_project 11 78892149 78897160 + Ift20 protein_coding retained_intron MGP_WSBEiJ_T0003126.1 MGP_WSBEiJ_G0002907.1 mouse_genomes_project 11 62142130 62148525 + Zfp286os antisense antisense MGP_WSBEiJ_T0031488.1 MGP_WSBEiJ_G0018475.1 mouse_genomes_project 11 101525404 101526602 - MGP_WSBEiJ_P0031488 Gm11595 protein_coding protein_coding MGP_WSBEiJ_T0028601.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58856640 58928005 + protein_coding processed_transcript MGP_WSBEiJ_T0028602.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58857830 58982289 + MGP_WSBEiJ_P0028602 protein_coding protein_coding MGP_WSBEiJ_T0028603.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58857842 58977640 + MGP_WSBEiJ_P0028603 protein_coding protein_coding MGP_WSBEiJ_T0028604.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58857842 58977640 + MGP_WSBEiJ_P0028604 protein_coding protein_coding MGP_WSBEiJ_T0028605.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58857842 58982283 + MGP_WSBEiJ_P0028605 protein_coding protein_coding MGP_WSBEiJ_T0028606.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58928000 58978019 + MGP_WSBEiJ_P0028606 protein_coding protein_coding MGP_WSBEiJ_T0028607.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58931869 58977640 + MGP_WSBEiJ_P0028607 protein_coding protein_coding MGP_WSBEiJ_T0028608.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58941162 58949897 + protein_coding processed_transcript MGP_WSBEiJ_T0028609.1 MGP_WSBEiJ_G0017765.1 mouse_genomes_project 11 58961060 58977640 + MGP_WSBEiJ_P0028609 protein_coding protein_coding MGP_WSBEiJ_T0030239.1 MGP_WSBEiJ_G0018135.1 mouse_genomes_project 11 78659899 78664709 + MGP_WSBEiJ_P0030239 Aldoc protein_coding protein_coding MGP_WSBEiJ_T0030240.1 MGP_WSBEiJ_G0018135.1 mouse_genomes_project 11 78660099 78661625 + Aldoc protein_coding retained_intron MGP_WSBEiJ_T0030241.1 MGP_WSBEiJ_G0018135.1 mouse_genomes_project 11 78661127 78663688 + MGP_WSBEiJ_P0030241 Aldoc protein_coding protein_coding MGP_WSBEiJ_T0030242.1 MGP_WSBEiJ_G0018135.1 mouse_genomes_project 11 78661253 78663046 + Aldoc protein_coding processed_transcript MGP_WSBEiJ_T0030243.1 MGP_WSBEiJ_G0018135.1 mouse_genomes_project 11 78661992 78662489 + Aldoc protein_coding processed_transcript MGP_WSBEiJ_T0030244.1 MGP_WSBEiJ_G0018135.1 mouse_genomes_project 11 78662256 78663636 + Aldoc protein_coding processed_transcript MGP_WSBEiJ_T0027076.1 MGP_WSBEiJ_G0017355.1 mouse_genomes_project 11 1533447 1584113 + MGP_WSBEiJ_P0027076 Ascc2 protein_coding protein_coding MGP_WSBEiJ_T0027077.1 MGP_WSBEiJ_G0017355.1 mouse_genomes_project 11 1533447 1586426 + MGP_WSBEiJ_P0027077 Ascc2 protein_coding protein_coding MGP_WSBEiJ_T0029172.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69034216 69035220 - Cntrob protein_coding retained_intron MGP_WSBEiJ_T0029173.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69034216 69058449 - MGP_WSBEiJ_P0029173 Cntrob protein_coding protein_coding MGP_WSBEiJ_T0029174.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69034216 69058449 - MGP_WSBEiJ_P0029174 Cntrob protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029175.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69034269 69053983 - MGP_WSBEiJ_P0029175 Cntrob protein_coding protein_coding MGP_WSBEiJ_T0029176.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69034430 69037872 - MGP_WSBEiJ_P0029176 Cntrob protein_coding protein_coding MGP_WSBEiJ_T0029177.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69036246 69039689 - Cntrob protein_coding retained_intron MGP_WSBEiJ_T0029178.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69043120 69044149 - MGP_WSBEiJ_P0029178 Cntrob protein_coding protein_coding MGP_WSBEiJ_T0029179.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69044750 69049833 - Cntrob protein_coding retained_intron MGP_WSBEiJ_T0029180.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69049471 69054748 - Cntrob protein_coding retained_intron MGP_WSBEiJ_T0029181.1 MGP_WSBEiJ_G0017888.1 mouse_genomes_project 11 69049887 69054001 - Cntrob protein_coding retained_intron MGP_WSBEiJ_T0006165.1 MGP_WSBEiJ_G0005152.1 mouse_genomes_project 11 64306949 64310101 - Gm12292 lincRNA lincRNA MGP_WSBEiJ_T0031105.1 MGP_WSBEiJ_G0018362.1 mouse_genomes_project 11 97696108 97706071 + MGP_WSBEiJ_P0031105 Hoxb6 protein_coding protein_coding MGP_WSBEiJ_T0031106.1 MGP_WSBEiJ_G0018362.1 mouse_genomes_project 11 97703674 97706070 + MGP_WSBEiJ_P0031106 Hoxb6 protein_coding protein_coding MGP_WSBEiJ_T0031685.1 MGP_WSBEiJ_G0018540.1 mouse_genomes_project 11 103052507 103054965 - MGP_WSBEiJ_P0031685 Ccr10 protein_coding protein_coding MGP_WSBEiJ_T0027541.1 MGP_WSBEiJ_G0017461.1 mouse_genomes_project 11 21076687 21146476 + MGP_WSBEiJ_P0027541 Pus10 protein_coding protein_coding MGP_WSBEiJ_T0027542.1 MGP_WSBEiJ_G0017461.1 mouse_genomes_project 11 21076710 21145125 + MGP_WSBEiJ_P0027542 Pus10 protein_coding protein_coding MGP_WSBEiJ_T0027543.1 MGP_WSBEiJ_G0017461.1 mouse_genomes_project 11 21077020 21146476 + MGP_WSBEiJ_P0027543 Pus10 protein_coding protein_coding MGP_WSBEiJ_T0027544.1 MGP_WSBEiJ_G0017461.1 mouse_genomes_project 11 21077201 21084326 + Pus10 protein_coding retained_intron MGP_WSBEiJ_T0027545.1 MGP_WSBEiJ_G0017461.1 mouse_genomes_project 11 21077524 21084212 + MGP_WSBEiJ_P0027545 Pus10 protein_coding protein_coding MGP_WSBEiJ_T0027546.1 MGP_WSBEiJ_G0017461.1 mouse_genomes_project 11 21130328 21141807 + Pus10 protein_coding retained_intron MGP_WSBEiJ_T0027547.1 MGP_WSBEiJ_G0017461.1 mouse_genomes_project 11 21131406 21144998 + Pus10 protein_coding retained_intron MGP_WSBEiJ_T0032449.1 MGP_WSBEiJ_G0018700.1 mouse_genomes_project 11 112724165 112796785 - MGP_WSBEiJ_P0032449 Abca5 protein_coding protein_coding MGP_WSBEiJ_T0032450.1 MGP_WSBEiJ_G0018700.1 mouse_genomes_project 11 112742217 112796729 - MGP_WSBEiJ_P0032450 Abca5 protein_coding protein_coding MGP_WSBEiJ_T0032451.1 MGP_WSBEiJ_G0018700.1 mouse_genomes_project 11 112766494 112796752 - Abca5 protein_coding retained_intron MGP_WSBEiJ_T0032452.1 MGP_WSBEiJ_G0018700.1 mouse_genomes_project 11 112778004 112796747 - MGP_WSBEiJ_P0032452 Abca5 protein_coding protein_coding MGP_WSBEiJ_T0032453.1 MGP_WSBEiJ_G0018700.1 mouse_genomes_project 11 112784640 112796823 - Abca5 protein_coding processed_transcript MGP_WSBEiJ_T0033230.1 MGP_WSBEiJ_G0018853.1 mouse_genomes_project 11 123548516 123610076 - MGP_WSBEiJ_P0033230 Nploc4 protein_coding protein_coding MGP_WSBEiJ_T0033231.1 MGP_WSBEiJ_G0018853.1 mouse_genomes_project 11 123548516 123610076 - MGP_WSBEiJ_P0033231 Nploc4 protein_coding protein_coding MGP_WSBEiJ_T0033232.1 MGP_WSBEiJ_G0018853.1 mouse_genomes_project 11 123550464 123551649 - Nploc4 protein_coding processed_transcript MGP_WSBEiJ_T0033233.1 MGP_WSBEiJ_G0018853.1 mouse_genomes_project 11 123573852 123593228 - Nploc4 protein_coding processed_transcript MGP_WSBEiJ_T0033234.1 MGP_WSBEiJ_G0018853.1 mouse_genomes_project 11 123583239 123586462 - Nploc4 protein_coding processed_transcript MGP_WSBEiJ_T0006090.1 MGP_WSBEiJ_G0005085.1 mouse_genomes_project 11 16848436 16849737 - Gm12027 lincRNA lincRNA MGP_WSBEiJ_T0016610.1 MGP_WSBEiJ_G0014597.1 mouse_genomes_project 11 69074916 69079506 + processed_transcript processed_transcript MGP_WSBEiJ_T0016611.1 MGP_WSBEiJ_G0014597.1 mouse_genomes_project 11 69075264 69077034 + processed_transcript processed_transcript MGP_WSBEiJ_T0009542.1 MGP_WSBEiJ_G0007699.1 mouse_genomes_project 11 64545199 64545298 - Gm25991 miRNA miRNA MGP_WSBEiJ_T0030509.1 MGP_WSBEiJ_G0018211.1 mouse_genomes_project 11 84187013 84197593 - MGP_WSBEiJ_P0030509 Heatr9 protein_coding protein_coding MGP_WSBEiJ_T0009591.1 MGP_WSBEiJ_G0007748.1 mouse_genomes_project 11 99186382 99186453 + Mir6927 miRNA miRNA MGP_WSBEiJ_T0012337.1 MGP_WSBEiJ_G0010467.1 mouse_genomes_project 11 51068373 51068536 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028575.1 MGP_WSBEiJ_G0017756.1 mouse_genomes_project 11 58483680 58513182 + MGP_WSBEiJ_P0028575 Wnt9a protein_coding protein_coding MGP_WSBEiJ_T0028576.1 MGP_WSBEiJ_G0017756.1 mouse_genomes_project 11 58483682 58513182 + MGP_WSBEiJ_P0028576 Wnt9a protein_coding protein_coding MGP_WSBEiJ_T0030117.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78059645 78164584 + MGP_WSBEiJ_P0030117 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030118.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78059687 78119740 + MGP_WSBEiJ_P0030118 Myo18a protein_coding unknown_likely_coding MGP_WSBEiJ_T0030119.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78059700 78076598 + Myo18a protein_coding retained_intron MGP_WSBEiJ_T0030120.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78062002 78073811 + MGP_WSBEiJ_P0030120 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030121.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78063139 78164584 + MGP_WSBEiJ_P0030121 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030122.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78068559 78164584 + MGP_WSBEiJ_P0030122 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030123.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78073669 78164584 + MGP_WSBEiJ_P0030123 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030124.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78073669 78164584 + MGP_WSBEiJ_P0030124 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030125.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78073697 78163747 + MGP_WSBEiJ_P0030125 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030126.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78073697 78163746 + MGP_WSBEiJ_P0030126 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030127.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78073720 78163452 + MGP_WSBEiJ_P0030127 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030129.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78099473 78164441 + MGP_WSBEiJ_P0030129 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030130.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78099512 78110772 + MGP_WSBEiJ_P0030130 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030131.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78099525 78164584 + MGP_WSBEiJ_P0030131 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030132.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78099525 78163713 + MGP_WSBEiJ_P0030132 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030133.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78099550 78163660 + MGP_WSBEiJ_P0030133 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030134.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78099550 78163441 + MGP_WSBEiJ_P0030134 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030135.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78109717 78164584 + MGP_WSBEiJ_P0030135 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030136.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78122730 78125817 + Myo18a protein_coding processed_transcript MGP_WSBEiJ_T0030137.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78136867 78140339 + Myo18a protein_coding processed_transcript MGP_WSBEiJ_T0030138.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78139702 78143605 + Myo18a protein_coding retained_intron MGP_WSBEiJ_T0030139.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78148151 78152084 + Myo18a protein_coding retained_intron MGP_WSBEiJ_T0030140.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78149355 78151955 + Myo18a protein_coding retained_intron MGP_WSBEiJ_T0030141.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78152493 78157966 + MGP_WSBEiJ_P0030141 Myo18a protein_coding protein_coding MGP_WSBEiJ_T0030142.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78156109 78163680 + Myo18a protein_coding retained_intron MGP_WSBEiJ_T0030143.1 MGP_WSBEiJ_G0018115.1 mouse_genomes_project 11 78158890 78163799 + Myo18a protein_coding processed_transcript MGP_WSBEiJ_T0029772.1 MGP_WSBEiJ_G0018018.1 mouse_genomes_project 11 73197494 73212864 - MGP_WSBEiJ_P0029772 Ctns protein_coding protein_coding MGP_WSBEiJ_T0029773.1 MGP_WSBEiJ_G0018018.1 mouse_genomes_project 11 73197495 73212864 - MGP_WSBEiJ_P0029773 Ctns protein_coding protein_coding MGP_WSBEiJ_T0029774.1 MGP_WSBEiJ_G0018018.1 mouse_genomes_project 11 73200250 73202705 - Ctns protein_coding retained_intron MGP_WSBEiJ_T0029775.1 MGP_WSBEiJ_G0018018.1 mouse_genomes_project 11 73205209 73212843 - Ctns protein_coding retained_intron MGP_WSBEiJ_T0029776.1 MGP_WSBEiJ_G0018018.1 mouse_genomes_project 11 73205611 73212817 - Ctns protein_coding processed_transcript MGP_WSBEiJ_T0028396.1 MGP_WSBEiJ_G0017684.1 mouse_genomes_project 11 53694928 53699041 + MGP_WSBEiJ_P0028396 Hint1 protein_coding protein_coding MGP_WSBEiJ_T0028397.1 MGP_WSBEiJ_G0017684.1 mouse_genomes_project 11 53695026 53698847 + MGP_WSBEiJ_P0028397 Hint1 protein_coding protein_coding MGP_WSBEiJ_T0012287.1 MGP_WSBEiJ_G0010417.1 mouse_genomes_project 11 27515182 27515654 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012461.1 MGP_WSBEiJ_G0010591.1 mouse_genomes_project 11 101609436 101609724 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030190.1 MGP_WSBEiJ_G0018126.1 mouse_genomes_project 11 78497019 78500789 + MGP_WSBEiJ_P0030190 Tlcd1 protein_coding protein_coding MGP_WSBEiJ_T0030191.1 MGP_WSBEiJ_G0018126.1 mouse_genomes_project 11 78498438 78499931 + MGP_WSBEiJ_P0030191 Tlcd1 protein_coding protein_coding MGP_WSBEiJ_T0030192.1 MGP_WSBEiJ_G0018126.1 mouse_genomes_project 11 78498457 78500463 + Tlcd1 protein_coding processed_transcript MGP_WSBEiJ_T0030193.1 MGP_WSBEiJ_G0018126.1 mouse_genomes_project 11 78498959 78502218 + MGP_WSBEiJ_P0030193 Tlcd1 protein_coding protein_coding MGP_WSBEiJ_T0030194.1 MGP_WSBEiJ_G0018126.1 mouse_genomes_project 11 78498993 78501129 + MGP_WSBEiJ_P0030194 Tlcd1 protein_coding protein_coding MGP_WSBEiJ_T0030195.1 MGP_WSBEiJ_G0018126.1 mouse_genomes_project 11 78499039 78499916 + Tlcd1 protein_coding retained_intron MGP_WSBEiJ_T0030196.1 MGP_WSBEiJ_G0018126.1 mouse_genomes_project 11 78499070 78500184 + MGP_WSBEiJ_P0030196 Tlcd1 protein_coding protein_coding MGP_WSBEiJ_T0030197.1 MGP_WSBEiJ_G0018126.1 mouse_genomes_project 11 78499581 78500400 + Tlcd1 protein_coding retained_intron MGP_WSBEiJ_T0009521.1 MGP_WSBEiJ_G0007678.1 mouse_genomes_project 11 42666899 42666949 + Gm22121 miRNA miRNA MGP_WSBEiJ_T0000820.1 MGP_WSBEiJ_G0000759.1 mouse_genomes_project 11 97385209 97386034 - TEC TEC MGP_WSBEiJ_T0027157.1 MGP_WSBEiJ_G0017369.1 mouse_genomes_project 11 2123274 2193905 - MGP_WSBEiJ_P0027157 Kremen1 protein_coding protein_coding MGP_WSBEiJ_T0027158.1 MGP_WSBEiJ_G0017369.1 mouse_genomes_project 11 2137216 2170824 - MGP_WSBEiJ_P0027158 Kremen1 protein_coding protein_coding MGP_WSBEiJ_T0003135.1 MGP_WSBEiJ_G0002914.1 mouse_genomes_project 11 66444413 66489760 - Gm12298 antisense antisense MGP_WSBEiJ_T0003152.1 MGP_WSBEiJ_G0002927.1 mouse_genomes_project 11 75115653 75116375 - Gm28180 antisense antisense MGP_WSBEiJ_T0029728.1 MGP_WSBEiJ_G0018006.1 mouse_genomes_project 11 72681760 72716434 + Ankfy1 protein_coding retained_intron MGP_WSBEiJ_T0029729.1 MGP_WSBEiJ_G0018006.1 mouse_genomes_project 11 72681760 72762929 + MGP_WSBEiJ_P0029729 Ankfy1 protein_coding protein_coding MGP_WSBEiJ_T0029730.1 MGP_WSBEiJ_G0018006.1 mouse_genomes_project 11 72681760 72760866 + MGP_WSBEiJ_P0029730 Ankfy1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029731.1 MGP_WSBEiJ_G0018006.1 mouse_genomes_project 11 72703763 72757234 + Ankfy1 protein_coding processed_transcript MGP_WSBEiJ_T0029732.1 MGP_WSBEiJ_G0018006.1 mouse_genomes_project 11 72751388 72752364 + Ankfy1 protein_coding retained_intron MGP_WSBEiJ_T0029733.1 MGP_WSBEiJ_G0018006.1 mouse_genomes_project 11 72755937 72757399 + Ankfy1 protein_coding retained_intron MGP_WSBEiJ_T0009603.1 MGP_WSBEiJ_G0007760.1 mouse_genomes_project 11 104415549 104415617 - Mir6930 miRNA miRNA MGP_WSBEiJ_T0033275.1 MGP_WSBEiJ_G0018862.1 mouse_genomes_project 11 123709130 123717416 + MGP_WSBEiJ_P0033275 Gcgr protein_coding protein_coding MGP_WSBEiJ_T0033276.1 MGP_WSBEiJ_G0018862.1 mouse_genomes_project 11 123709175 123717418 + Gcgr protein_coding processed_transcript MGP_WSBEiJ_T0033277.1 MGP_WSBEiJ_G0018862.1 mouse_genomes_project 11 123709205 123717415 + Gcgr protein_coding processed_transcript MGP_WSBEiJ_T0033278.1 MGP_WSBEiJ_G0018862.1 mouse_genomes_project 11 123713111 123715141 + Gcgr protein_coding processed_transcript MGP_WSBEiJ_T0012494.1 MGP_WSBEiJ_G0010624.1 mouse_genomes_project 11 116368192 116369620 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029667.1 MGP_WSBEiJ_G0017990.1 mouse_genomes_project 11 72004316 72005567 + MGP_WSBEiJ_P0029667 Fam64a protein_coding protein_coding MGP_WSBEiJ_T0029668.1 MGP_WSBEiJ_G0017990.1 mouse_genomes_project 11 72004739 72009655 + MGP_WSBEiJ_P0029668 Fam64a protein_coding protein_coding MGP_WSBEiJ_T0029669.1 MGP_WSBEiJ_G0017990.1 mouse_genomes_project 11 72004786 72005949 + Fam64a protein_coding processed_transcript MGP_WSBEiJ_T0029670.1 MGP_WSBEiJ_G0017990.1 mouse_genomes_project 11 72004808 72008378 + Fam64a protein_coding processed_transcript MGP_WSBEiJ_T0029671.1 MGP_WSBEiJ_G0017990.1 mouse_genomes_project 11 72005206 72007325 + MGP_WSBEiJ_P0029671 Fam64a protein_coding protein_coding MGP_WSBEiJ_T0029672.1 MGP_WSBEiJ_G0017990.1 mouse_genomes_project 11 72005334 72009660 + MGP_WSBEiJ_P0029672 Fam64a protein_coding unknown_likely_coding MGP_WSBEiJ_T0033282.1 MGP_WSBEiJ_G0018865.1 mouse_genomes_project 11 123742116 123754963 - MGP_WSBEiJ_P0033282 P4hb protein_coding protein_coding MGP_WSBEiJ_T0033283.1 MGP_WSBEiJ_G0018865.1 mouse_genomes_project 11 123742123 123743055 - P4hb protein_coding processed_transcript MGP_WSBEiJ_T0033284.1 MGP_WSBEiJ_G0018865.1 mouse_genomes_project 11 123742763 123754551 - MGP_WSBEiJ_P0033284 P4hb protein_coding protein_coding MGP_WSBEiJ_T0006121.1 MGP_WSBEiJ_G0005111.1 mouse_genomes_project 11 30573747 30574711 - 4930555O08Rik lincRNA lincRNA MGP_WSBEiJ_T0028618.1 MGP_WSBEiJ_G0017768.1 mouse_genomes_project 11 59019252 59020146 - Cops3 protein_coding processed_transcript MGP_WSBEiJ_T0028619.1 MGP_WSBEiJ_G0017768.1 mouse_genomes_project 11 59019252 59041062 - MGP_WSBEiJ_P0028619 Cops3 protein_coding protein_coding MGP_WSBEiJ_T0028620.1 MGP_WSBEiJ_G0017768.1 mouse_genomes_project 11 59022813 59038360 - MGP_WSBEiJ_P0028620 Cops3 protein_coding protein_coding MGP_WSBEiJ_T0028621.1 MGP_WSBEiJ_G0017768.1 mouse_genomes_project 11 59024731 59041062 - Cops3 protein_coding processed_transcript MGP_WSBEiJ_T0028622.1 MGP_WSBEiJ_G0017768.1 mouse_genomes_project 11 59025749 59034719 - Cops3 protein_coding processed_transcript MGP_WSBEiJ_T0028623.1 MGP_WSBEiJ_G0017768.1 mouse_genomes_project 11 59027645 59041062 - Cops3 protein_coding processed_transcript MGP_WSBEiJ_T0028624.1 MGP_WSBEiJ_G0017768.1 mouse_genomes_project 11 59034516 59040976 - MGP_WSBEiJ_P0028624 Cops3 protein_coding protein_coding MGP_WSBEiJ_T0028625.1 MGP_WSBEiJ_G0017768.1 mouse_genomes_project 11 59038062 59041036 - Cops3 protein_coding processed_transcript MGP_WSBEiJ_T0030294.1 MGP_WSBEiJ_G0018152.1 mouse_genomes_project 11 79298801 79339346 + MGP_WSBEiJ_P0030294 Nos2 protein_coding protein_coding MGP_WSBEiJ_T0030295.1 MGP_WSBEiJ_G0018152.1 mouse_genomes_project 11 79303217 79338844 + MGP_WSBEiJ_P0030295 Nos2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012275.1 MGP_WSBEiJ_G0010405.1 mouse_genomes_project 11 24569900 24570119 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031743.1 MGP_WSBEiJ_G0018550.1 mouse_genomes_project 11 103225379 103235249 + MGP_WSBEiJ_P0031743 Aoc3 protein_coding protein_coding MGP_WSBEiJ_T0031744.1 MGP_WSBEiJ_G0018550.1 mouse_genomes_project 11 103225843 103239456 + MGP_WSBEiJ_P0031744 Aoc3 protein_coding protein_coding MGP_WSBEiJ_T0029734.1 MGP_WSBEiJ_G0018007.1 mouse_genomes_project 11 72768248 72788035 - MGP_WSBEiJ_P0029734 Cyb5d2 protein_coding protein_coding MGP_WSBEiJ_T0029735.1 MGP_WSBEiJ_G0018007.1 mouse_genomes_project 11 72769755 72787881 - MGP_WSBEiJ_P0029735 Cyb5d2 protein_coding protein_coding MGP_WSBEiJ_T0029736.1 MGP_WSBEiJ_G0018007.1 mouse_genomes_project 11 72769894 72788269 - Cyb5d2 protein_coding processed_transcript MGP_WSBEiJ_T0029737.1 MGP_WSBEiJ_G0018007.1 mouse_genomes_project 11 72785070 72788020 - Cyb5d2 protein_coding retained_intron MGP_WSBEiJ_T0030067.1 MGP_WSBEiJ_G0018104.1 mouse_genomes_project 11 77333294 77443676 - MGP_WSBEiJ_P0030067 Efcab5 protein_coding protein_coding MGP_WSBEiJ_T0030068.1 MGP_WSBEiJ_G0018104.1 mouse_genomes_project 11 77333323 77347297 - Efcab5 protein_coding retained_intron MGP_WSBEiJ_T0030069.1 MGP_WSBEiJ_G0018104.1 mouse_genomes_project 11 77333567 77402762 - MGP_WSBEiJ_P0030069 Efcab5 protein_coding protein_coding MGP_WSBEiJ_T0030070.1 MGP_WSBEiJ_G0018104.1 mouse_genomes_project 11 77333680 77470713 - MGP_WSBEiJ_P0030070 Efcab5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030071.1 MGP_WSBEiJ_G0018104.1 mouse_genomes_project 11 77346954 77382575 - Efcab5 protein_coding retained_intron MGP_WSBEiJ_T0030072.1 MGP_WSBEiJ_G0018104.1 mouse_genomes_project 11 77402538 77423785 - Efcab5 protein_coding processed_transcript MGP_WSBEiJ_T0026990.1 MGP_WSBEiJ_G0017333.1 mouse_genomes_project 11 540669 711006 - MGP_WSBEiJ_P0026990 Osbp2 protein_coding protein_coding MGP_WSBEiJ_T0026991.1 MGP_WSBEiJ_G0017333.1 mouse_genomes_project 11 540671 566045 - MGP_WSBEiJ_P0026991 Osbp2 protein_coding protein_coding MGP_WSBEiJ_T0026992.1 MGP_WSBEiJ_G0017333.1 mouse_genomes_project 11 540856 560298 - MGP_WSBEiJ_P0026992 Osbp2 protein_coding protein_coding MGP_WSBEiJ_T0026993.1 MGP_WSBEiJ_G0017333.1 mouse_genomes_project 11 555934 613456 - MGP_WSBEiJ_P0026993 Osbp2 protein_coding protein_coding MGP_WSBEiJ_T0026994.1 MGP_WSBEiJ_G0017333.1 mouse_genomes_project 11 555994 614403 - MGP_WSBEiJ_P0026994 Osbp2 protein_coding protein_coding MGP_WSBEiJ_T0026995.1 MGP_WSBEiJ_G0017333.1 mouse_genomes_project 11 562483 711006 - Osbp2 protein_coding processed_transcript MGP_WSBEiJ_T0031794.1 MGP_WSBEiJ_G0018562.1 mouse_genomes_project 11 103502180 103516191 + MGP_WSBEiJ_P0031794 Tmem106a protein_coding protein_coding MGP_WSBEiJ_T0031795.1 MGP_WSBEiJ_G0018562.1 mouse_genomes_project 11 103502180 103516191 + MGP_WSBEiJ_P0031795 Tmem106a protein_coding protein_coding MGP_WSBEiJ_T0031796.1 MGP_WSBEiJ_G0018562.1 mouse_genomes_project 11 103502182 103513837 + Tmem106a protein_coding processed_transcript MGP_WSBEiJ_T0031797.1 MGP_WSBEiJ_G0018562.1 mouse_genomes_project 11 103502195 103513343 + MGP_WSBEiJ_P0031797 Tmem106a protein_coding protein_coding MGP_WSBEiJ_T0031798.1 MGP_WSBEiJ_G0018562.1 mouse_genomes_project 11 103502238 103513298 + MGP_WSBEiJ_P0031798 Tmem106a protein_coding protein_coding MGP_WSBEiJ_T0031799.1 MGP_WSBEiJ_G0018562.1 mouse_genomes_project 11 103510454 103515169 + Tmem106a protein_coding processed_transcript MGP_WSBEiJ_T0009580.1 MGP_WSBEiJ_G0007737.1 mouse_genomes_project 11 88645438 88645553 - Mir142b miRNA miRNA MGP_WSBEiJ_T0009609.1 MGP_WSBEiJ_G0007766.1 mouse_genomes_project 11 109053229 109053296 - Mir3064 miRNA miRNA MGP_WSBEiJ_T0016571.1 MGP_WSBEiJ_G0014573.1 mouse_genomes_project 11 18679299 18683701 + Gm12043 processed_transcript processed_transcript MGP_WSBEiJ_T0027766.1 MGP_WSBEiJ_G0017515.1 mouse_genomes_project 11 31457213 31510765 - MGP_WSBEiJ_P0027766 Kcnip1 protein_coding protein_coding MGP_WSBEiJ_T0027767.1 MGP_WSBEiJ_G0017515.1 mouse_genomes_project 11 31457221 31694016 - MGP_WSBEiJ_P0027767 Kcnip1 protein_coding protein_coding MGP_WSBEiJ_T0027768.1 MGP_WSBEiJ_G0017515.1 mouse_genomes_project 11 31457221 31694074 - MGP_WSBEiJ_P0027768 Kcnip1 protein_coding protein_coding MGP_WSBEiJ_T0027769.1 MGP_WSBEiJ_G0017515.1 mouse_genomes_project 11 31468635 31852170 - Kcnip1 protein_coding processed_transcript MGP_WSBEiJ_T0027770.1 MGP_WSBEiJ_G0017515.1 mouse_genomes_project 11 31468959 31852005 - Kcnip1 protein_coding processed_transcript MGP_WSBEiJ_T0032838.1 MGP_WSBEiJ_G0018778.1 mouse_genomes_project 11 119178666 119181664 + MGP_WSBEiJ_P0032838 Galr2 protein_coding protein_coding MGP_WSBEiJ_T0032839.1 MGP_WSBEiJ_G0018778.1 mouse_genomes_project 11 119179212 119181387 + Galr2 protein_coding processed_transcript MGP_WSBEiJ_T0027613.1 MGP_WSBEiJ_G0017476.1 mouse_genomes_project 11 27168302 27171577 - MGP_WSBEiJ_P0027613 Prorsd1 protein_coding protein_coding MGP_WSBEiJ_T0027614.1 MGP_WSBEiJ_G0017476.1 mouse_genomes_project 11 27169421 27171579 - MGP_WSBEiJ_P0027614 Prorsd1 protein_coding protein_coding MGP_WSBEiJ_T0032851.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119237239 119317710 - MGP_WSBEiJ_P0032851 Rnf157 protein_coding protein_coding MGP_WSBEiJ_T0032852.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119237239 119263196 - MGP_WSBEiJ_P0032852 Rnf157 protein_coding protein_coding MGP_WSBEiJ_T0032853.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119237239 119317710 - MGP_WSBEiJ_P0032853 Rnf157 protein_coding protein_coding MGP_WSBEiJ_T0032854.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119239225 119249960 - Rnf157 protein_coding processed_transcript MGP_WSBEiJ_T0032855.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119239292 119250434 - MGP_WSBEiJ_P0032855 Rnf157 protein_coding protein_coding MGP_WSBEiJ_T0032856.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119255158 119263618 - Rnf157 protein_coding processed_transcript MGP_WSBEiJ_T0032857.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119256475 119257977 - Rnf157 protein_coding processed_transcript MGP_WSBEiJ_T0032858.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119261482 119263422 - Rnf157 protein_coding processed_transcript MGP_WSBEiJ_T0032859.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119263366 119264126 - Rnf157 protein_coding processed_transcript MGP_WSBEiJ_T0032860.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119264002 119296057 - Rnf157 protein_coding processed_transcript MGP_WSBEiJ_T0032861.1 MGP_WSBEiJ_G0018781.1 mouse_genomes_project 11 119305946 119317738 - Rnf157 protein_coding processed_transcript MGP_WSBEiJ_T0033007.1 MGP_WSBEiJ_G0018809.1 mouse_genomes_project 11 120855103 120866674 - MGP_WSBEiJ_P0033007 Tk1 protein_coding protein_coding MGP_WSBEiJ_T0033008.1 MGP_WSBEiJ_G0018809.1 mouse_genomes_project 11 120855201 120857252 - Tk1 protein_coding retained_intron MGP_WSBEiJ_T0033009.1 MGP_WSBEiJ_G0018809.1 mouse_genomes_project 11 120862241 120866409 - Tk1 protein_coding retained_intron MGP_WSBEiJ_T0033010.1 MGP_WSBEiJ_G0018809.1 mouse_genomes_project 11 120862319 120866449 - Tk1 protein_coding retained_intron MGP_WSBEiJ_T0033011.1 MGP_WSBEiJ_G0018809.1 mouse_genomes_project 11 120863059 120866429 - Tk1 protein_coding retained_intron MGP_WSBEiJ_T0033012.1 MGP_WSBEiJ_G0018809.1 mouse_genomes_project 11 120865411 120866389 - Tk1 protein_coding retained_intron MGP_WSBEiJ_T0016616.1 MGP_WSBEiJ_G0014600.1 mouse_genomes_project 11 75304684 75309745 + 1700016P03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0030417.1 MGP_WSBEiJ_G0018185.1 mouse_genomes_project 11 82685457 82687014 + MGP_WSBEiJ_P0030417 Ccl12 protein_coding protein_coding MGP_WSBEiJ_T0030418.1 MGP_WSBEiJ_G0018185.1 mouse_genomes_project 11 82685464 82686981 + Ccl12 protein_coding processed_transcript MGP_WSBEiJ_T0033368.1 MGP_WSBEiJ_G0018879.1 mouse_genomes_project 11 123915102 123919244 + MGP_WSBEiJ_P0033368 Rac3 protein_coding protein_coding MGP_WSBEiJ_T0033369.1 MGP_WSBEiJ_G0018879.1 mouse_genomes_project 11 123915205 123918881 + MGP_WSBEiJ_P0033369 Rac3 protein_coding protein_coding MGP_WSBEiJ_T0033370.1 MGP_WSBEiJ_G0018879.1 mouse_genomes_project 11 123915239 123919253 + MGP_WSBEiJ_P0033370 Rac3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033371.1 MGP_WSBEiJ_G0018879.1 mouse_genomes_project 11 123917288 123918840 + Rac3 protein_coding processed_transcript MGP_WSBEiJ_T0016582.1 MGP_WSBEiJ_G0014581.1 mouse_genomes_project 11 31831926 31963329 - 4930469K13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0030974.1 MGP_WSBEiJ_G0018322.1 mouse_genomes_project 11 95860047 95876434 + MGP_WSBEiJ_P0030974 Lrrc59 protein_coding protein_coding MGP_WSBEiJ_T0030975.1 MGP_WSBEiJ_G0018322.1 mouse_genomes_project 11 95860094 95866469 + Lrrc59 protein_coding retained_intron MGP_WSBEiJ_T0028974.1 MGP_WSBEiJ_G0017840.1 mouse_genomes_project 11 65299602 65321644 + MGP_WSBEiJ_P0028974 Zkscan6 protein_coding protein_coding MGP_WSBEiJ_T0028975.1 MGP_WSBEiJ_G0017840.1 mouse_genomes_project 11 65299671 65321645 + MGP_WSBEiJ_P0028975 Zkscan6 protein_coding protein_coding MGP_WSBEiJ_T0009589.1 MGP_WSBEiJ_G0007746.1 mouse_genomes_project 11 98619297 98619353 - Mir7235 miRNA miRNA MGP_WSBEiJ_T0028233.1 MGP_WSBEiJ_G0017644.1 mouse_genomes_project 11 50745021 50775675 + MGP_WSBEiJ_P0028233 Ppp2ca protein_coding protein_coding MGP_WSBEiJ_T0028234.1 MGP_WSBEiJ_G0017644.1 mouse_genomes_project 11 50766649 50767599 + Ppp2ca protein_coding retained_intron MGP_WSBEiJ_T0029507.1 MGP_WSBEiJ_G0017962.1 mouse_genomes_project 11 70335921 70337462 + MGP_WSBEiJ_P0029507 Gltpd2 protein_coding protein_coding MGP_WSBEiJ_T0029508.1 MGP_WSBEiJ_G0017962.1 mouse_genomes_project 11 70336364 70337245 + MGP_WSBEiJ_P0029508 Gltpd2 protein_coding protein_coding MGP_WSBEiJ_T0027109.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1910829 1967370 + MGP_WSBEiJ_P0027109 Ap1b1 protein_coding protein_coding MGP_WSBEiJ_T0027110.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1910829 1967308 + MGP_WSBEiJ_P0027110 Ap1b1 protein_coding protein_coding MGP_WSBEiJ_T0027111.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1910917 1939643 + Ap1b1 protein_coding processed_transcript MGP_WSBEiJ_T0027112.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1910939 1940756 + Ap1b1 protein_coding processed_transcript MGP_WSBEiJ_T0027113.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1934077 1939643 + Ap1b1 protein_coding processed_transcript MGP_WSBEiJ_T0027114.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1934133 1967308 + MGP_WSBEiJ_P0027114 Ap1b1 protein_coding protein_coding MGP_WSBEiJ_T0027115.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1955582 1957397 + Ap1b1 protein_coding processed_transcript MGP_WSBEiJ_T0027116.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1961945 1964981 + Ap1b1 protein_coding processed_transcript MGP_WSBEiJ_T0027117.1 MGP_WSBEiJ_G0017363.1 mouse_genomes_project 11 1963340 1965000 + Ap1b1 protein_coding processed_transcript MGP_WSBEiJ_T0030697.1 MGP_WSBEiJ_G0018258.1 mouse_genomes_project 11 87914338 87923926 - MGP_WSBEiJ_P0030697 Smg8 protein_coding protein_coding MGP_WSBEiJ_T0030698.1 MGP_WSBEiJ_G0018258.1 mouse_genomes_project 11 87914342 87922534 - MGP_WSBEiJ_P0030698 Smg8 protein_coding protein_coding MGP_WSBEiJ_T0029801.1 MGP_WSBEiJ_G0018030.1 mouse_genomes_project 11 73637749 73803049 + MGP_WSBEiJ_P0029801 protein_coding protein_coding MGP_WSBEiJ_T0100474.1 MGP_WSBEiJ_G0038933.1 mouse_genomes_project 11 58093700 58094111 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097718.1 MGP_WSBEiJ_G0036381.1 mouse_genomes_project 11 84196542 84196649 + Gm23247 snRNA snRNA MGP_WSBEiJ_T0030752.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88649490 88676505 + MGP_WSBEiJ_P0030752 Bzrap1 protein_coding protein_coding MGP_WSBEiJ_T0030753.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88649536 88676505 + MGP_WSBEiJ_P0030753 Bzrap1 protein_coding protein_coding MGP_WSBEiJ_T0030754.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88655338 88657003 + Bzrap1 protein_coding processed_transcript MGP_WSBEiJ_T0030755.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88666686 88670095 + MGP_WSBEiJ_P0030755 Bzrap1 protein_coding protein_coding MGP_WSBEiJ_T0030756.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88667093 88676505 + MGP_WSBEiJ_P0030756 Bzrap1 protein_coding protein_coding MGP_WSBEiJ_T0030757.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88667651 88676505 + Bzrap1 protein_coding retained_intron MGP_WSBEiJ_T0030758.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88669349 88676505 + Bzrap1 protein_coding retained_intron MGP_WSBEiJ_T0030759.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88669508 88670846 + Bzrap1 protein_coding retained_intron MGP_WSBEiJ_T0030760.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88670852 88675318 + MGP_WSBEiJ_P0030760 Bzrap1 protein_coding protein_coding MGP_WSBEiJ_T0030761.1 MGP_WSBEiJ_G0018271.1 mouse_genomes_project 11 88672133 88673771 + Bzrap1 protein_coding retained_intron MGP_WSBEiJ_T0027646.1 MGP_WSBEiJ_G0017482.1 mouse_genomes_project 11 27773473 27943595 - MGP_WSBEiJ_P0027646 Sptbn1 protein_coding protein_coding MGP_WSBEiJ_T0027647.1 MGP_WSBEiJ_G0017482.1 mouse_genomes_project 11 27773474 27777328 - Sptbn1 protein_coding retained_intron MGP_WSBEiJ_T0027648.1 MGP_WSBEiJ_G0017482.1 mouse_genomes_project 11 27773474 27894628 - MGP_WSBEiJ_P0027648 Sptbn1 protein_coding protein_coding MGP_WSBEiJ_T0027649.1 MGP_WSBEiJ_G0017482.1 mouse_genomes_project 11 27775591 27779689 - Sptbn1 protein_coding retained_intron MGP_WSBEiJ_T0027650.1 MGP_WSBEiJ_G0017482.1 mouse_genomes_project 11 27780863 27873212 - MGP_WSBEiJ_P0027650 Sptbn1 protein_coding protein_coding MGP_WSBEiJ_T0027651.1 MGP_WSBEiJ_G0017482.1 mouse_genomes_project 11 27783947 27785436 - Sptbn1 protein_coding retained_intron MGP_WSBEiJ_T0027652.1 MGP_WSBEiJ_G0017482.1 mouse_genomes_project 11 27784024 27942640 - MGP_WSBEiJ_P0027652 Sptbn1 protein_coding protein_coding MGP_WSBEiJ_T0027653.1 MGP_WSBEiJ_G0017482.1 mouse_genomes_project 11 27891516 27943601 - Sptbn1 protein_coding retained_intron MGP_WSBEiJ_T0009503.1 MGP_WSBEiJ_G0007660.1 mouse_genomes_project 11 1962780 1962884 + miRNA miRNA MGP_WSBEiJ_T0003239.1 MGP_WSBEiJ_G0002997.1 mouse_genomes_project 11 107348988 107354378 - 1700052K11Rik antisense antisense MGP_WSBEiJ_T0029477.1 MGP_WSBEiJ_G0017954.1 mouse_genomes_project 11 70153191 70162034 - MGP_WSBEiJ_P0029477 Alox15 protein_coding protein_coding MGP_WSBEiJ_T0029478.1 MGP_WSBEiJ_G0017954.1 mouse_genomes_project 11 70153253 70154345 - Alox15 protein_coding processed_transcript MGP_WSBEiJ_T0012364.1 MGP_WSBEiJ_G0010494.1 mouse_genomes_project 11 59684954 59685396 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027964.1 MGP_WSBEiJ_G0017572.1 mouse_genomes_project 11 47151295 47162242 - MGP_WSBEiJ_P0027964 Trim41 protein_coding protein_coding MGP_WSBEiJ_T0027965.1 MGP_WSBEiJ_G0017572.1 mouse_genomes_project 11 47153277 47157286 - MGP_WSBEiJ_P0027965 Trim41 protein_coding protein_coding MGP_WSBEiJ_T0027966.1 MGP_WSBEiJ_G0017572.1 mouse_genomes_project 11 47153992 47161842 - MGP_WSBEiJ_P0027966 Trim41 protein_coding protein_coding MGP_WSBEiJ_T0027967.1 MGP_WSBEiJ_G0017572.1 mouse_genomes_project 11 47154094 47161123 - MGP_WSBEiJ_P0027967 Trim41 protein_coding protein_coding MGP_WSBEiJ_T0003055.1 MGP_WSBEiJ_G0002844.1 mouse_genomes_project 11 13982713 14000286 - Egfros antisense antisense MGP_WSBEiJ_T0032186.1 MGP_WSBEiJ_G0018639.1 mouse_genomes_project 11 107470149 107510306 + Mrc2 protein_coding processed_transcript MGP_WSBEiJ_T0032187.1 MGP_WSBEiJ_G0018639.1 mouse_genomes_project 11 107470152 107535492 + MGP_WSBEiJ_P0032187 Mrc2 protein_coding protein_coding MGP_WSBEiJ_T0032188.1 MGP_WSBEiJ_G0018639.1 mouse_genomes_project 11 107470174 107528225 + MGP_WSBEiJ_P0032188 Mrc2 protein_coding protein_coding MGP_WSBEiJ_T0032189.1 MGP_WSBEiJ_G0018639.1 mouse_genomes_project 11 107512464 107515712 + Mrc2 protein_coding processed_transcript MGP_WSBEiJ_T0032190.1 MGP_WSBEiJ_G0018639.1 mouse_genomes_project 11 107525182 107527495 + Mrc2 protein_coding retained_intron MGP_WSBEiJ_T0029659.1 MGP_WSBEiJ_G0017988.1 mouse_genomes_project 11 71702492 71712663 + MGP_WSBEiJ_P0029659 Wscd1 protein_coding protein_coding MGP_WSBEiJ_T0029660.1 MGP_WSBEiJ_G0017988.1 mouse_genomes_project 11 71703243 71742815 + MGP_WSBEiJ_P0029660 Wscd1 protein_coding protein_coding MGP_WSBEiJ_T0029661.1 MGP_WSBEiJ_G0017988.1 mouse_genomes_project 11 71703538 71742815 + MGP_WSBEiJ_P0029661 Wscd1 protein_coding protein_coding MGP_WSBEiJ_T0029662.1 MGP_WSBEiJ_G0017988.1 mouse_genomes_project 11 71703934 71713519 + Wscd1 protein_coding retained_intron MGP_WSBEiJ_T0029663.1 MGP_WSBEiJ_G0017988.1 mouse_genomes_project 11 71703934 71742815 + MGP_WSBEiJ_P0029663 Wscd1 protein_coding protein_coding MGP_WSBEiJ_T0029664.1 MGP_WSBEiJ_G0017988.1 mouse_genomes_project 11 71721197 71738461 + Wscd1 protein_coding processed_transcript MGP_WSBEiJ_T0033250.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123640882 123643623 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033251.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641337 123643290 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033252.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641451 123643616 - MGP_WSBEiJ_P0033252 Arl16 protein_coding protein_coding MGP_WSBEiJ_T0033253.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641606 123643481 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033254.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641613 123643350 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033255.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641628 123643436 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033256.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641769 123643497 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033257.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641783 123643437 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033258.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641785 123643412 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033259.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123641930 123643449 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0033260.1 MGP_WSBEiJ_G0018858.1 mouse_genomes_project 11 123642920 123643469 - Arl16 protein_coding processed_transcript MGP_WSBEiJ_T0006292.1 MGP_WSBEiJ_G0005245.1 mouse_genomes_project 11 125028170 125035372 + Gm12589 lincRNA lincRNA MGP_WSBEiJ_T0003235.1 MGP_WSBEiJ_G0002993.1 mouse_genomes_project 11 105436377 105441771 + Arhgap27os2 antisense antisense MGP_WSBEiJ_T0009517.1 MGP_WSBEiJ_G0007674.1 mouse_genomes_project 11 33522607 33522717 + Mir218-2 miRNA miRNA MGP_WSBEiJ_T0011103.1 MGP_WSBEiJ_G0009260.1 mouse_genomes_project 11 49041703 49041979 - Gm23824 misc_RNA misc_RNA MGP_WSBEiJ_T0006174.1 MGP_WSBEiJ_G0005158.1 mouse_genomes_project 11 70589997 70596438 - Gm12320 lincRNA lincRNA MGP_WSBEiJ_T0031900.1 MGP_WSBEiJ_G0018582.1 mouse_genomes_project 11 104262896 104274498 + MGP_WSBEiJ_P0031900 Asb16 protein_coding protein_coding MGP_WSBEiJ_T0031110.1 MGP_WSBEiJ_G0018365.1 mouse_genomes_project 11 97729791 97755961 + MGP_WSBEiJ_P0031110 Hoxb3 protein_coding protein_coding MGP_WSBEiJ_T0031111.1 MGP_WSBEiJ_G0018365.1 mouse_genomes_project 11 97734535 97752332 + MGP_WSBEiJ_P0031111 Hoxb3 protein_coding protein_coding MGP_WSBEiJ_T0031112.1 MGP_WSBEiJ_G0018365.1 mouse_genomes_project 11 97748976 97749806 + Hoxb3 protein_coding processed_transcript MGP_WSBEiJ_T0031113.1 MGP_WSBEiJ_G0018365.1 mouse_genomes_project 11 97751797 97754536 + MGP_WSBEiJ_P0031113 Hoxb3 protein_coding protein_coding MGP_WSBEiJ_T0031242.1 MGP_WSBEiJ_G0018394.1 mouse_genomes_project 11 99198257 99202455 + MGP_WSBEiJ_P0031242 Cisd3 protein_coding protein_coding MGP_WSBEiJ_T0031243.1 MGP_WSBEiJ_G0018394.1 mouse_genomes_project 11 99198274 99202455 + MGP_WSBEiJ_P0031243 Cisd3 protein_coding protein_coding MGP_WSBEiJ_T0031244.1 MGP_WSBEiJ_G0018394.1 mouse_genomes_project 11 99198384 99202455 + MGP_WSBEiJ_P0031244 Cisd3 protein_coding protein_coding MGP_WSBEiJ_T0032566.1 MGP_WSBEiJ_G0018729.1 mouse_genomes_project 11 117965347 117987319 + MGP_WSBEiJ_P0032566 Slc9a3r1 protein_coding protein_coding MGP_WSBEiJ_T0006289.1 MGP_WSBEiJ_G0005242.1 mouse_genomes_project 11 123664660 123666930 - Gm16755 lincRNA lincRNA MGP_WSBEiJ_T0032208.1 MGP_WSBEiJ_G0018643.1 mouse_genomes_project 11 108168463 108191086 + MGP_WSBEiJ_P0032208 Ace protein_coding protein_coding MGP_WSBEiJ_T0032209.1 MGP_WSBEiJ_G0018643.1 mouse_genomes_project 11 108171833 108190382 + MGP_WSBEiJ_P0032209 Ace protein_coding protein_coding MGP_WSBEiJ_T0032210.1 MGP_WSBEiJ_G0018643.1 mouse_genomes_project 11 108175704 108190375 + MGP_WSBEiJ_P0032210 Ace protein_coding protein_coding MGP_WSBEiJ_T0032211.1 MGP_WSBEiJ_G0018643.1 mouse_genomes_project 11 108177099 108186214 + Ace protein_coding processed_transcript MGP_WSBEiJ_T0009621.1 MGP_WSBEiJ_G0007778.1 mouse_genomes_project 11 122247730 122247792 - Mir6934 miRNA miRNA MGP_WSBEiJ_T0031611.1 MGP_WSBEiJ_G0018522.1 mouse_genomes_project 11 102577545 102598625 - MGP_WSBEiJ_P0031611 Kcnh4 protein_coding protein_coding MGP_WSBEiJ_T0031612.1 MGP_WSBEiJ_G0018522.1 mouse_genomes_project 11 102577551 102598827 - MGP_WSBEiJ_P0031612 Kcnh4 protein_coding protein_coding MGP_WSBEiJ_T0029503.1 MGP_WSBEiJ_G0017960.1 mouse_genomes_project 11 70322098 70328017 + MGP_WSBEiJ_P0029503 Tm4sf5 protein_coding protein_coding MGP_WSBEiJ_T0029504.1 MGP_WSBEiJ_G0017960.1 mouse_genomes_project 11 70326808 70327721 + Tm4sf5 protein_coding processed_transcript MGP_WSBEiJ_T0029505.1 MGP_WSBEiJ_G0017960.1 mouse_genomes_project 11 70327044 70327806 + Tm4sf5 protein_coding retained_intron MGP_WSBEiJ_T0028510.1 MGP_WSBEiJ_G0017726.1 mouse_genomes_project 11 57654145 57655267 + MGP_WSBEiJ_P0028510 Olfr324 protein_coding protein_coding MGP_WSBEiJ_T0012372.1 MGP_WSBEiJ_G0010502.1 mouse_genomes_project 11 61634446 61634753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033089.1 MGP_WSBEiJ_G0018828.1 mouse_genomes_project 11 122127692 122132349 - MGP_WSBEiJ_P0033089 Cbx8 protein_coding protein_coding MGP_WSBEiJ_T0033090.1 MGP_WSBEiJ_G0018828.1 mouse_genomes_project 11 122130432 122132211 - Cbx8 protein_coding processed_transcript MGP_WSBEiJ_T0033091.1 MGP_WSBEiJ_G0018828.1 mouse_genomes_project 11 122130563 122132291 - Cbx8 protein_coding processed_transcript MGP_WSBEiJ_T0027688.1 MGP_WSBEiJ_G0017494.1 mouse_genomes_project 11 29712977 29778727 + MGP_WSBEiJ_P0027688 Nsg2 protein_coding protein_coding MGP_WSBEiJ_T0027689.1 MGP_WSBEiJ_G0017494.1 mouse_genomes_project 11 29712977 29733927 + MGP_WSBEiJ_P0027689 Nsg2 protein_coding protein_coding MGP_WSBEiJ_T0027690.1 MGP_WSBEiJ_G0017494.1 mouse_genomes_project 11 29713016 29750225 + MGP_WSBEiJ_P0027690 Nsg2 protein_coding protein_coding MGP_WSBEiJ_T0029936.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75691634 75704021 + MGP_WSBEiJ_P0029936 Slc43a2 protein_coding protein_coding MGP_WSBEiJ_T0029937.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75691638 75740483 + MGP_WSBEiJ_P0029937 Slc43a2 protein_coding protein_coding MGP_WSBEiJ_T0029938.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75691638 75736796 + MGP_WSBEiJ_P0029938 Slc43a2 protein_coding protein_coding MGP_WSBEiJ_T0029939.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75691683 75706475 + MGP_WSBEiJ_P0029939 Slc43a2 protein_coding protein_coding MGP_WSBEiJ_T0029940.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75692052 75740478 + MGP_WSBEiJ_P0029940 Slc43a2 protein_coding protein_coding MGP_WSBEiJ_T0029941.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75692078 75706528 + MGP_WSBEiJ_P0029941 Slc43a2 protein_coding protein_coding MGP_WSBEiJ_T0029942.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75698755 75706462 + Slc43a2 protein_coding processed_transcript MGP_WSBEiJ_T0029943.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75723732 75729981 + Slc43a2 protein_coding retained_intron MGP_WSBEiJ_T0029944.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75728920 75733103 + Slc43a2 protein_coding processed_transcript MGP_WSBEiJ_T0029945.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75729616 75735325 + Slc43a2 protein_coding retained_intron MGP_WSBEiJ_T0029946.1 MGP_WSBEiJ_G0018077.1 mouse_genomes_project 11 75729729 75734703 + Slc43a2 protein_coding processed_transcript MGP_WSBEiJ_T0030915.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95492850 95528680 - MGP_WSBEiJ_P0030915 Luc7l3 protein_coding protein_coding MGP_WSBEiJ_T0030916.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95496034 95528710 - MGP_WSBEiJ_P0030916 Luc7l3 protein_coding protein_coding MGP_WSBEiJ_T0030917.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95496034 95502039 - MGP_WSBEiJ_P0030917 Luc7l3 protein_coding protein_coding MGP_WSBEiJ_T0030918.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95496112 95528710 - MGP_WSBEiJ_P0030918 Luc7l3 protein_coding protein_coding MGP_WSBEiJ_T0030919.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95496112 95528710 - MGP_WSBEiJ_P0030919 Luc7l3 protein_coding protein_coding MGP_WSBEiJ_T0030920.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95496302 95498193 - MGP_WSBEiJ_P0030920 Luc7l3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030921.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95497743 95528617 - MGP_WSBEiJ_P0030921 Luc7l3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030922.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95501978 95503190 - Luc7l3 protein_coding retained_intron MGP_WSBEiJ_T0030923.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95501986 95503996 - Luc7l3 protein_coding processed_transcript MGP_WSBEiJ_T0030924.1 MGP_WSBEiJ_G0018312.1 mouse_genomes_project 11 95502027 95505197 - Luc7l3 protein_coding retained_intron MGP_WSBEiJ_T0033440.1 MGP_WSBEiJ_G0018895.1 mouse_genomes_project 11 124371091 124372794 + MGP_WSBEiJ_P0033440 Uts2r protein_coding protein_coding MGP_WSBEiJ_T0030999.1 MGP_WSBEiJ_G0018330.1 mouse_genomes_project 11 96292053 96292917 + MGP_WSBEiJ_P0030999 Hils1 protein_coding protein_coding MGP_WSBEiJ_T0033137.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122628882 122644576 + MGP_WSBEiJ_P0033137 Endov protein_coding protein_coding MGP_WSBEiJ_T0033138.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122628883 122644840 + MGP_WSBEiJ_P0033138 Endov protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033139.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122628884 122646797 + MGP_WSBEiJ_P0033139 Endov protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033140.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122628935 122644528 + MGP_WSBEiJ_P0033140 Endov protein_coding protein_coding MGP_WSBEiJ_T0033141.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122629060 122642505 + MGP_WSBEiJ_P0033141 Endov protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033142.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122629185 122638234 + Endov protein_coding retained_intron MGP_WSBEiJ_T0033143.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122629294 122640219 + Endov protein_coding processed_transcript MGP_WSBEiJ_T0033144.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122636926 122643183 + MGP_WSBEiJ_P0033144 Endov protein_coding protein_coding MGP_WSBEiJ_T0033145.1 MGP_WSBEiJ_G0018838.1 mouse_genomes_project 11 122639369 122644538 + Endov protein_coding retained_intron MGP_WSBEiJ_T0028252.1 MGP_WSBEiJ_G0017649.1 mouse_genomes_project 11 51448142 51889414 + MGP_WSBEiJ_P0028252 Fstl4 protein_coding protein_coding MGP_WSBEiJ_T0032491.1 MGP_WSBEiJ_G0018710.1 mouse_genomes_project 11 116388523 116400853 - MGP_WSBEiJ_P0032491 Cpsf4l protein_coding protein_coding MGP_WSBEiJ_T0032492.1 MGP_WSBEiJ_G0018710.1 mouse_genomes_project 11 116388523 116401350 - MGP_WSBEiJ_P0032492 Cpsf4l protein_coding protein_coding MGP_WSBEiJ_T0032493.1 MGP_WSBEiJ_G0018710.1 mouse_genomes_project 11 116388523 116400859 - MGP_WSBEiJ_P0032493 Cpsf4l protein_coding protein_coding MGP_WSBEiJ_T0032494.1 MGP_WSBEiJ_G0018710.1 mouse_genomes_project 11 116388523 116400300 - MGP_WSBEiJ_P0032494 Cpsf4l protein_coding protein_coding MGP_WSBEiJ_T0032495.1 MGP_WSBEiJ_G0018710.1 mouse_genomes_project 11 116393525 116400857 - Cpsf4l protein_coding retained_intron MGP_WSBEiJ_T0032120.1 MGP_WSBEiJ_G0018625.1 mouse_genomes_project 11 106069571 106088195 + MGP_WSBEiJ_P0032120 Arf2 protein_coding protein_coding MGP_WSBEiJ_T0032121.1 MGP_WSBEiJ_G0018625.1 mouse_genomes_project 11 106069703 106088195 + MGP_WSBEiJ_P0032121 Arf2 protein_coding protein_coding MGP_WSBEiJ_T0032122.1 MGP_WSBEiJ_G0018625.1 mouse_genomes_project 11 106075818 106084756 + Arf2 protein_coding retained_intron MGP_WSBEiJ_T0032123.1 MGP_WSBEiJ_G0018625.1 mouse_genomes_project 11 106082450 106086485 + MGP_WSBEiJ_P0032123 Arf2 protein_coding protein_coding MGP_WSBEiJ_T0012510.1 MGP_WSBEiJ_G0010640.1 mouse_genomes_project 11 122790224 122790669 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029837.1 MGP_WSBEiJ_G0018054.1 mouse_genomes_project 11 74486409 74698188 - MGP_WSBEiJ_P0029837 protein_coding protein_coding MGP_WSBEiJ_T0029838.1 MGP_WSBEiJ_G0018054.1 mouse_genomes_project 11 74486536 74698160 - MGP_WSBEiJ_P0029838 protein_coding protein_coding MGP_WSBEiJ_T0029839.1 MGP_WSBEiJ_G0018054.1 mouse_genomes_project 11 74486537 74514421 - protein_coding processed_transcript MGP_WSBEiJ_T0029840.1 MGP_WSBEiJ_G0018054.1 mouse_genomes_project 11 74491402 74633509 - MGP_WSBEiJ_P0029840 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029841.1 MGP_WSBEiJ_G0018054.1 mouse_genomes_project 11 74544430 74698126 - MGP_WSBEiJ_P0029841 protein_coding protein_coding MGP_WSBEiJ_T0028126.1 MGP_WSBEiJ_G0017618.1 mouse_genomes_project 11 49354866 49373338 - MGP_WSBEiJ_P0028126 Zfp354c protein_coding protein_coding MGP_WSBEiJ_T0028127.1 MGP_WSBEiJ_G0017618.1 mouse_genomes_project 11 49358339 49372105 - MGP_WSBEiJ_P0028127 Zfp354c protein_coding protein_coding MGP_WSBEiJ_T0028128.1 MGP_WSBEiJ_G0017618.1 mouse_genomes_project 11 49361028 49373334 - Zfp354c protein_coding processed_transcript MGP_WSBEiJ_T0028129.1 MGP_WSBEiJ_G0017618.1 mouse_genomes_project 11 49371922 49373372 - Zfp354c protein_coding processed_transcript MGP_WSBEiJ_T0098891.1 MGP_WSBEiJ_G0037554.1 mouse_genomes_project 11 1962787 1962884 + Gm24958 snoRNA snoRNA MGP_WSBEiJ_T0029029.1 MGP_WSBEiJ_G0017857.1 mouse_genomes_project 11 67384770 67387394 + Dhrs7c protein_coding processed_transcript MGP_WSBEiJ_T0029030.1 MGP_WSBEiJ_G0017857.1 mouse_genomes_project 11 67384854 67387762 + Dhrs7c protein_coding processed_transcript MGP_WSBEiJ_T0029031.1 MGP_WSBEiJ_G0017857.1 mouse_genomes_project 11 67384859 67387923 + Dhrs7c protein_coding processed_transcript MGP_WSBEiJ_T0029032.1 MGP_WSBEiJ_G0017857.1 mouse_genomes_project 11 67384860 67385650 + Dhrs7c protein_coding processed_transcript MGP_WSBEiJ_T0029033.1 MGP_WSBEiJ_G0017857.1 mouse_genomes_project 11 67384870 67402718 + MGP_WSBEiJ_P0029033 Dhrs7c protein_coding protein_coding MGP_WSBEiJ_T0028631.1 MGP_WSBEiJ_G0017771.1 mouse_genomes_project 11 59169419 59171185 - MGP_WSBEiJ_P0028631 Rasd1 protein_coding protein_coding MGP_WSBEiJ_T0031497.1 MGP_WSBEiJ_G0018484.1 mouse_genomes_project 11 101701794 101702719 + MGP_WSBEiJ_P0031497 Gm11565 protein_coding protein_coding MGP_WSBEiJ_T0012423.1 MGP_WSBEiJ_G0010553.1 mouse_genomes_project 11 83338337 83338631 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012254.1 MGP_WSBEiJ_G0010384.1 mouse_genomes_project 11 17846917 17847540 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028728.1 MGP_WSBEiJ_G0017790.1 mouse_genomes_project 11 60118921 60133506 - MGP_WSBEiJ_P0028728 Tmem11 protein_coding protein_coding MGP_WSBEiJ_T0028729.1 MGP_WSBEiJ_G0017790.1 mouse_genomes_project 11 60118921 60133740 - MGP_WSBEiJ_P0028729 Tmem11 protein_coding protein_coding MGP_WSBEiJ_T0028730.1 MGP_WSBEiJ_G0017790.1 mouse_genomes_project 11 60119459 60133255 - MGP_WSBEiJ_P0028730 Tmem11 protein_coding protein_coding MGP_WSBEiJ_T0006188.1 MGP_WSBEiJ_G0005169.1 mouse_genomes_project 11 76840448 76848192 + Gm26780 lincRNA lincRNA MGP_WSBEiJ_T0006136.1 MGP_WSBEiJ_G0005126.1 mouse_genomes_project 11 43338116 43354038 - Gm12159 lincRNA lincRNA MGP_WSBEiJ_T0029303.1 MGP_WSBEiJ_G0017918.1 mouse_genomes_project 11 69574211 69576235 - MGP_WSBEiJ_P0029303 Tmem102 protein_coding protein_coding MGP_WSBEiJ_T0009554.1 MGP_WSBEiJ_G0007711.1 mouse_genomes_project 11 70032285 70032369 + Mir497 miRNA miRNA MGP_WSBEiJ_T0031543.1 MGP_WSBEiJ_G0018508.1 mouse_genomes_project 11 102239445 102249166 + MGP_WSBEiJ_P0031543 Fkbp10 protein_coding protein_coding MGP_WSBEiJ_T0031544.1 MGP_WSBEiJ_G0018508.1 mouse_genomes_project 11 102239514 102248454 + MGP_WSBEiJ_P0031544 Fkbp10 protein_coding protein_coding MGP_WSBEiJ_T0031545.1 MGP_WSBEiJ_G0018508.1 mouse_genomes_project 11 102239593 102246431 + MGP_WSBEiJ_P0031545 Fkbp10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031546.1 MGP_WSBEiJ_G0018508.1 mouse_genomes_project 11 102244765 102246038 + Fkbp10 protein_coding retained_intron MGP_WSBEiJ_T0031549.1 MGP_WSBEiJ_G0018508.1 mouse_genomes_project 11 102247379 102248642 + Fkbp10 protein_coding retained_intron MGP_WSBEiJ_T0032466.1 MGP_WSBEiJ_G0018704.1 mouse_genomes_project 11 115381993 115387537 + MGP_WSBEiJ_P0032466 Sox9 protein_coding protein_coding MGP_WSBEiJ_T0031174.1 MGP_WSBEiJ_G0018377.1 mouse_genomes_project 11 98477864 98490152 + MGP_WSBEiJ_P0031174 Sp6 protein_coding protein_coding MGP_WSBEiJ_T0031175.1 MGP_WSBEiJ_G0018377.1 mouse_genomes_project 11 98484269 98490149 + MGP_WSBEiJ_P0031175 Sp6 protein_coding protein_coding MGP_WSBEiJ_T0011599.1 MGP_WSBEiJ_G0009754.1 mouse_genomes_project 11 73988682 73993261 + MGP_WSBEiJ_P0011599 Olfr396-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011600.1 MGP_WSBEiJ_G0009754.1 mouse_genomes_project 11 73992541 73993174 + MGP_WSBEiJ_P0011600 Olfr396-ps1 polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0031109.1 MGP_WSBEiJ_G0018364.1 mouse_genomes_project 11 97722764 97728097 + MGP_WSBEiJ_P0031109 Hoxb4 protein_coding protein_coding MGP_WSBEiJ_T0003287.1 MGP_WSBEiJ_G0003035.1 mouse_genomes_project 11 123404774 123405663 - Gm11772 antisense antisense MGP_WSBEiJ_T0029279.1 MGP_WSBEiJ_G0017911.1 mouse_genomes_project 11 69443465 69446174 - MGP_WSBEiJ_P0029279 Tnfsf13 protein_coding protein_coding MGP_WSBEiJ_T0029280.1 MGP_WSBEiJ_G0017911.1 mouse_genomes_project 11 69443551 69446404 - MGP_WSBEiJ_P0029280 Tnfsf13 protein_coding protein_coding MGP_WSBEiJ_T0032382.1 MGP_WSBEiJ_G0018683.1 mouse_genomes_project 11 111043207 111044310 - MGP_WSBEiJ_P0032382 protein_coding protein_coding MGP_WSBEiJ_T0028533.1 MGP_WSBEiJ_G0017741.1 mouse_genomes_project 11 58016010 58032303 - MGP_WSBEiJ_P0028533 Zfp39 protein_coding protein_coding MGP_WSBEiJ_T0033297.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123793358 123801208 - MGP_WSBEiJ_P0033297 Pcyt2 protein_coding protein_coding MGP_WSBEiJ_T0033298.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123793722 123801197 - MGP_WSBEiJ_P0033298 Pcyt2 protein_coding protein_coding MGP_WSBEiJ_T0033299.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123793943 123795381 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0033300.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123794147 123795353 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0033301.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123794899 123796346 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0033302.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123795476 123801180 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0033303.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123795867 123796966 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0033304.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123796206 123796860 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0033305.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123796248 123797796 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0033306.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123796301 123801185 - Pcyt2 protein_coding processed_transcript MGP_WSBEiJ_T0033307.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123798446 123801182 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0033308.1 MGP_WSBEiJ_G0018870.1 mouse_genomes_project 11 123798717 123801141 - Pcyt2 protein_coding retained_intron MGP_WSBEiJ_T0028527.1 MGP_WSBEiJ_G0017738.1 mouse_genomes_project 11 57890980 57900004 - MGP_WSBEiJ_P0028527 Fam183b protein_coding protein_coding MGP_WSBEiJ_T0028528.1 MGP_WSBEiJ_G0017738.1 mouse_genomes_project 11 57890994 57900004 - MGP_WSBEiJ_P0028528 Fam183b protein_coding protein_coding MGP_WSBEiJ_T0030807.1 MGP_WSBEiJ_G0018283.1 mouse_genomes_project 11 89301106 89694258 - MGP_WSBEiJ_P0030807 Msi2 protein_coding protein_coding MGP_WSBEiJ_T0030808.1 MGP_WSBEiJ_G0018283.1 mouse_genomes_project 11 89305621 89694232 - MGP_WSBEiJ_P0030808 Msi2 protein_coding protein_coding MGP_WSBEiJ_T0030809.1 MGP_WSBEiJ_G0018283.1 mouse_genomes_project 11 89329279 89564430 - Msi2 protein_coding retained_intron MGP_WSBEiJ_T0030810.1 MGP_WSBEiJ_G0018283.1 mouse_genomes_project 11 89448489 89694241 - Msi2 protein_coding retained_intron MGP_WSBEiJ_T0030811.1 MGP_WSBEiJ_G0018283.1 mouse_genomes_project 11 89564337 89695754 - MGP_WSBEiJ_P0030811 Msi2 protein_coding protein_coding MGP_WSBEiJ_T0028683.1 MGP_WSBEiJ_G0017778.1 mouse_genomes_project 11 59652996 59689673 + MGP_WSBEiJ_P0028683 Gid4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028684.1 MGP_WSBEiJ_G0017778.1 mouse_genomes_project 11 59653146 59683489 + MGP_WSBEiJ_P0028684 Gid4 protein_coding protein_coding MGP_WSBEiJ_T0011115.1 MGP_WSBEiJ_G0009272.1 mouse_genomes_project 11 96281550 96281666 + Gm24877 misc_RNA misc_RNA MGP_WSBEiJ_T0028441.1 MGP_WSBEiJ_G0017699.1 mouse_genomes_project 11 55933999 56271354 + MGP_WSBEiJ_P0028441 Gria1 protein_coding protein_coding MGP_WSBEiJ_T0028442.1 MGP_WSBEiJ_G0017699.1 mouse_genomes_project 11 55934145 56271353 + MGP_WSBEiJ_P0028442 Gria1 protein_coding protein_coding MGP_WSBEiJ_T0028443.1 MGP_WSBEiJ_G0017699.1 mouse_genomes_project 11 55934223 56271359 + MGP_WSBEiJ_P0028443 Gria1 protein_coding protein_coding MGP_WSBEiJ_T0028444.1 MGP_WSBEiJ_G0017699.1 mouse_genomes_project 11 56116421 56126345 + Gria1 protein_coding processed_transcript MGP_WSBEiJ_T0012234.1 MGP_WSBEiJ_G0010364.1 mouse_genomes_project 11 11907180 11909316 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029783.1 MGP_WSBEiJ_G0018021.1 mouse_genomes_project 11 73289347 73326303 + MGP_WSBEiJ_P0029783 Trpv3 protein_coding protein_coding MGP_WSBEiJ_T0006147.1 MGP_WSBEiJ_G0005135.1 mouse_genomes_project 11 50593453 50917579 - lincRNA lincRNA MGP_WSBEiJ_T0012280.1 MGP_WSBEiJ_G0010410.1 mouse_genomes_project 11 25580161 25583244 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028335.1 MGP_WSBEiJ_G0017674.1 mouse_genomes_project 11 52856300 52870387 - MGP_WSBEiJ_P0028335 Pdlim4 protein_coding protein_coding MGP_WSBEiJ_T0028336.1 MGP_WSBEiJ_G0017674.1 mouse_genomes_project 11 52857293 52866201 - MGP_WSBEiJ_P0028336 Pdlim4 protein_coding protein_coding MGP_WSBEiJ_T0028337.1 MGP_WSBEiJ_G0017674.1 mouse_genomes_project 11 52860351 52870446 - Pdlim4 protein_coding retained_intron MGP_WSBEiJ_T0028338.1 MGP_WSBEiJ_G0017674.1 mouse_genomes_project 11 52865127 52865973 - Pdlim4 protein_coding processed_transcript MGP_WSBEiJ_T0097713.1 MGP_WSBEiJ_G0036376.1 mouse_genomes_project 11 80014009 80014113 + Gm23293 snRNA snRNA MGP_WSBEiJ_T0012235.1 MGP_WSBEiJ_G0010365.1 mouse_genomes_project 11 12191656 12192756 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009515.1 MGP_WSBEiJ_G0007672.1 mouse_genomes_project 11 26416204 26416312 + Mir217 miRNA miRNA MGP_WSBEiJ_T0012206.1 MGP_WSBEiJ_G0010336.1 mouse_genomes_project 11 463953 464791 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029247.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69415998 69422702 - MGP_WSBEiJ_P0029247 Mpdu1 protein_coding protein_coding MGP_WSBEiJ_T0029248.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69416262 69422624 - MGP_WSBEiJ_P0029248 Mpdu1 protein_coding protein_coding MGP_WSBEiJ_T0029249.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69416328 69422647 - MGP_WSBEiJ_P0029249 Mpdu1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029250.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69416430 69417582 - Mpdu1 protein_coding retained_intron MGP_WSBEiJ_T0029251.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69416455 69422647 - MGP_WSBEiJ_P0029251 Mpdu1 protein_coding protein_coding MGP_WSBEiJ_T0029252.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69416463 69422578 - MGP_WSBEiJ_P0029252 Mpdu1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029253.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69416514 69417555 - Mpdu1 protein_coding retained_intron MGP_WSBEiJ_T0029254.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69417034 69422564 - Mpdu1 protein_coding retained_intron MGP_WSBEiJ_T0029255.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69417648 69422620 - Mpdu1 protein_coding retained_intron MGP_WSBEiJ_T0029256.1 MGP_WSBEiJ_G0017906.1 mouse_genomes_project 11 69417777 69418707 - Mpdu1 protein_coding retained_intron MGP_WSBEiJ_T0033051.1 MGP_WSBEiJ_G0018821.1 mouse_genomes_project 11 121450397 121455801 - MGP_WSBEiJ_P0033051 Lgals3bp protein_coding protein_coding MGP_WSBEiJ_T0033052.1 MGP_WSBEiJ_G0018821.1 mouse_genomes_project 11 121450397 121459759 - MGP_WSBEiJ_P0033052 Lgals3bp protein_coding protein_coding MGP_WSBEiJ_T0033053.1 MGP_WSBEiJ_G0018821.1 mouse_genomes_project 11 121454253 121459519 - MGP_WSBEiJ_P0033053 Lgals3bp protein_coding protein_coding MGP_WSBEiJ_T0033054.1 MGP_WSBEiJ_G0018821.1 mouse_genomes_project 11 121454455 121459539 - Lgals3bp protein_coding processed_transcript MGP_WSBEiJ_T0033055.1 MGP_WSBEiJ_G0018821.1 mouse_genomes_project 11 121457426 121458704 - MGP_WSBEiJ_P0033055 Lgals3bp protein_coding protein_coding MGP_WSBEiJ_T0030866.1 MGP_WSBEiJ_G0018301.1 mouse_genomes_project 11 92662548 92664792 - MGP_WSBEiJ_P0030866 Kif2b protein_coding protein_coding MGP_WSBEiJ_T0003080.1 MGP_WSBEiJ_G0002867.1 mouse_genomes_project 11 48662557 48663480 - Gm12195 antisense antisense MGP_WSBEiJ_T0006172.1 MGP_WSBEiJ_G0005156.1 mouse_genomes_project 11 70450708 70453243 - Gm12315 lincRNA lincRNA MGP_WSBEiJ_T0012269.1 MGP_WSBEiJ_G0010399.1 mouse_genomes_project 11 21338947 21339206 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012346.1 MGP_WSBEiJ_G0010476.1 mouse_genomes_project 11 53001471 53001731 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003065.1 MGP_WSBEiJ_G0002852.1 mouse_genomes_project 11 27171631 27175172 + Gm12089 antisense antisense MGP_WSBEiJ_T0030338.1 MGP_WSBEiJ_G0018164.1 mouse_genomes_project 11 80435868 80480845 + MGP_WSBEiJ_P0030338 Suz12 protein_coding protein_coding MGP_WSBEiJ_T0030339.1 MGP_WSBEiJ_G0018164.1 mouse_genomes_project 11 80435868 80480846 + MGP_WSBEiJ_P0030339 Suz12 protein_coding protein_coding MGP_WSBEiJ_T0030340.1 MGP_WSBEiJ_G0018164.1 mouse_genomes_project 11 80438348 80445523 + Suz12 protein_coding retained_intron MGP_WSBEiJ_T0030341.1 MGP_WSBEiJ_G0018164.1 mouse_genomes_project 11 80438379 80459669 + Suz12 protein_coding retained_intron MGP_WSBEiJ_T0030342.1 MGP_WSBEiJ_G0018164.1 mouse_genomes_project 11 80438553 80459599 + MGP_WSBEiJ_P0030342 Suz12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030343.1 MGP_WSBEiJ_G0018164.1 mouse_genomes_project 11 80470964 80478724 + MGP_WSBEiJ_P0030343 Suz12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027735.1 MGP_WSBEiJ_G0017503.1 mouse_genomes_project 11 30208437 30277365 + MGP_WSBEiJ_P0027735 Ubtd2 protein_coding protein_coding MGP_WSBEiJ_T0030322.1 MGP_WSBEiJ_G0018159.1 mouse_genomes_project 11 79931521 79948731 - MGP_WSBEiJ_P0030322 Gm21975 protein_coding protein_coding MGP_WSBEiJ_T0030323.1 MGP_WSBEiJ_G0018159.1 mouse_genomes_project 11 79931521 79948701 - MGP_WSBEiJ_P0030323 Gm21975 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026996.1 MGP_WSBEiJ_G0017334.1 mouse_genomes_project 11 744658 754946 - MGP_WSBEiJ_P0026996 4921536K21Rik protein_coding protein_coding MGP_WSBEiJ_T0096765.1 MGP_WSBEiJ_G0035446.1 mouse_genomes_project 11 73419651 73436220 - pseudogene pseudogene MGP_WSBEiJ_T0032032.1 MGP_WSBEiJ_G0018604.1 mouse_genomes_project 11 104957071 104978927 - MGP_WSBEiJ_P0032032 Kif18b protein_coding protein_coding MGP_WSBEiJ_T0032033.1 MGP_WSBEiJ_G0018604.1 mouse_genomes_project 11 104968046 104978891 - Kif18b protein_coding processed_transcript MGP_WSBEiJ_T0029792.1 MGP_WSBEiJ_G0018024.1 mouse_genomes_project 11 73400753 73406495 + MGP_WSBEiJ_P0029792 Olfr376 protein_coding protein_coding MGP_WSBEiJ_T0029793.1 MGP_WSBEiJ_G0018024.1 mouse_genomes_project 11 73400753 73406495 + MGP_WSBEiJ_P0029793 Olfr376 protein_coding protein_coding MGP_WSBEiJ_T0029794.1 MGP_WSBEiJ_G0018024.1 mouse_genomes_project 11 73400773 73407289 + MGP_WSBEiJ_P0029794 Olfr376 protein_coding protein_coding MGP_WSBEiJ_T0027771.1 MGP_WSBEiJ_G0017516.1 mouse_genomes_project 11 31821019 31831610 + MGP_WSBEiJ_P0027771 Kcnmb1 protein_coding protein_coding MGP_WSBEiJ_T0028030.1 MGP_WSBEiJ_G0017591.1 mouse_genomes_project 11 47778249 47779185 + MGP_WSBEiJ_P0028030 Olfr1391 protein_coding protein_coding MGP_WSBEiJ_T0027468.1 MGP_WSBEiJ_G0017445.1 mouse_genomes_project 11 19323396 19330224 - MGP_WSBEiJ_P0027468 Otx1 protein_coding protein_coding MGP_WSBEiJ_T0027469.1 MGP_WSBEiJ_G0017445.1 mouse_genomes_project 11 19323401 19330319 - Otx1 protein_coding retained_intron MGP_WSBEiJ_T0027470.1 MGP_WSBEiJ_G0017445.1 mouse_genomes_project 11 19325462 19331509 - MGP_WSBEiJ_P0027470 Otx1 protein_coding protein_coding MGP_WSBEiJ_T0030784.1 MGP_WSBEiJ_G0018278.1 mouse_genomes_project 11 88980478 88986846 + MGP_WSBEiJ_P0030784 Srsf1 protein_coding protein_coding MGP_WSBEiJ_T0030785.1 MGP_WSBEiJ_G0018278.1 mouse_genomes_project 11 88980824 88984592 + MGP_WSBEiJ_P0030785 Srsf1 protein_coding protein_coding MGP_WSBEiJ_T0030786.1 MGP_WSBEiJ_G0018278.1 mouse_genomes_project 11 88980831 88981930 + Srsf1 protein_coding retained_intron MGP_WSBEiJ_T0030787.1 MGP_WSBEiJ_G0018278.1 mouse_genomes_project 11 88980906 88983513 + MGP_WSBEiJ_P0030787 Srsf1 protein_coding protein_coding MGP_WSBEiJ_T0030788.1 MGP_WSBEiJ_G0018278.1 mouse_genomes_project 11 88981670 88984574 + MGP_WSBEiJ_P0030788 Srsf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030789.1 MGP_WSBEiJ_G0018278.1 mouse_genomes_project 11 88981692 88984225 + MGP_WSBEiJ_P0030789 Srsf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030790.1 MGP_WSBEiJ_G0018278.1 mouse_genomes_project 11 88982515 88984154 + Srsf1 protein_coding retained_intron MGP_WSBEiJ_T0030832.1 MGP_WSBEiJ_G0018292.1 mouse_genomes_project 11 90420250 90452204 - MGP_WSBEiJ_P0030832 protein_coding protein_coding MGP_WSBEiJ_T0031615.1 MGP_WSBEiJ_G0018524.1 mouse_genomes_project 11 102605147 102610005 - MGP_WSBEiJ_P0031615 Ghdc protein_coding protein_coding MGP_WSBEiJ_T0031616.1 MGP_WSBEiJ_G0018524.1 mouse_genomes_project 11 102605934 102607760 - Ghdc protein_coding processed_transcript MGP_WSBEiJ_T0031617.1 MGP_WSBEiJ_G0018524.1 mouse_genomes_project 11 102608738 102609990 - MGP_WSBEiJ_P0031617 Ghdc protein_coding protein_coding MGP_WSBEiJ_T0029900.1 MGP_WSBEiJ_G0018068.1 mouse_genomes_project 11 75436726 75494803 - MGP_WSBEiJ_P0029900 Rpa1 protein_coding protein_coding MGP_WSBEiJ_T0029901.1 MGP_WSBEiJ_G0018068.1 mouse_genomes_project 11 75438910 75494789 - MGP_WSBEiJ_P0029901 Rpa1 protein_coding protein_coding MGP_WSBEiJ_T0029902.1 MGP_WSBEiJ_G0018068.1 mouse_genomes_project 11 75439865 75486776 - Rpa1 protein_coding processed_transcript MGP_WSBEiJ_T0029903.1 MGP_WSBEiJ_G0018068.1 mouse_genomes_project 11 75454536 75494774 - Rpa1 protein_coding retained_intron MGP_WSBEiJ_T0029904.1 MGP_WSBEiJ_G0018068.1 mouse_genomes_project 11 75486565 75494772 - Rpa1 protein_coding processed_transcript MGP_WSBEiJ_T0006127.1 MGP_WSBEiJ_G0005117.1 mouse_genomes_project 11 35641584 35655868 + Gm12128 lincRNA lincRNA MGP_WSBEiJ_T0027404.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16074651 16220801 - MGP_WSBEiJ_P0027404 Meis1 protein_coding protein_coding MGP_WSBEiJ_T0027405.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16075262 16220530 - MGP_WSBEiJ_P0027405 Meis1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027406.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16075262 16220785 - MGP_WSBEiJ_P0027406 Meis1 protein_coding protein_coding MGP_WSBEiJ_T0027407.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16075495 16220774 - MGP_WSBEiJ_P0027407 Meis1 protein_coding protein_coding MGP_WSBEiJ_T0027408.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16075501 16213816 - Meis1 protein_coding processed_transcript MGP_WSBEiJ_T0027409.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16075508 16220530 - MGP_WSBEiJ_P0027409 Meis1 protein_coding protein_coding MGP_WSBEiJ_T0027410.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16076185 16218106 - MGP_WSBEiJ_P0027410 Meis1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027411.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16188606 16220738 - Meis1 protein_coding retained_intron MGP_WSBEiJ_T0027412.1 MGP_WSBEiJ_G0017431.1 mouse_genomes_project 11 16211610 16220738 - Meis1 protein_coding retained_intron MGP_WSBEiJ_T0016665.1 MGP_WSBEiJ_G0014630.1 mouse_genomes_project 11 107547596 107575943 + Gm11638 processed_transcript processed_transcript MGP_WSBEiJ_T0012213.1 MGP_WSBEiJ_G0010343.1 mouse_genomes_project 11 2589077 2589521 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098952.1 MGP_WSBEiJ_G0037615.1 mouse_genomes_project 11 100695647 100695762 + Gm26394 snoRNA snoRNA MGP_WSBEiJ_T0003148.1 MGP_WSBEiJ_G0002925.1 mouse_genomes_project 11 69442757 69453051 + Tnfsf13os antisense antisense MGP_WSBEiJ_T0003149.1 MGP_WSBEiJ_G0002925.1 mouse_genomes_project 11 69444948 69453428 + Tnfsf13os antisense antisense MGP_WSBEiJ_T0003150.1 MGP_WSBEiJ_G0002925.1 mouse_genomes_project 11 69445120 69453428 + Tnfsf13os antisense antisense MGP_WSBEiJ_T0012274.1 MGP_WSBEiJ_G0010404.1 mouse_genomes_project 11 24365396 24365920 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100502.1 MGP_WSBEiJ_G0038961.1 mouse_genomes_project 11 103249286 103250181 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0032335.1 MGP_WSBEiJ_G0018673.1 mouse_genomes_project 11 109450360 109476570 - MGP_WSBEiJ_P0032335 Nol11 protein_coding protein_coding MGP_WSBEiJ_T0032336.1 MGP_WSBEiJ_G0018673.1 mouse_genomes_project 11 109451067 109452158 - Nol11 protein_coding processed_transcript MGP_WSBEiJ_T0032337.1 MGP_WSBEiJ_G0018673.1 mouse_genomes_project 11 109464368 109471967 - Nol11 protein_coding processed_transcript MGP_WSBEiJ_T0032338.1 MGP_WSBEiJ_G0018673.1 mouse_genomes_project 11 109473734 109476541 - Nol11 protein_coding processed_transcript MGP_WSBEiJ_T0031285.1 MGP_WSBEiJ_G0018403.1 mouse_genomes_project 11 99382444 99384671 - Fbxo47 protein_coding retained_intron MGP_WSBEiJ_T0031286.1 MGP_WSBEiJ_G0018403.1 mouse_genomes_project 11 99382444 99417804 - MGP_WSBEiJ_P0031286 Fbxo47 protein_coding protein_coding MGP_WSBEiJ_T0012225.1 MGP_WSBEiJ_G0010355.1 mouse_genomes_project 11 5873442 5874212 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097672.1 MGP_WSBEiJ_G0036335.1 mouse_genomes_project 11 1197941 1198048 - Gm24803 snRNA snRNA MGP_WSBEiJ_T0032400.1 MGP_WSBEiJ_G0018688.1 mouse_genomes_project 11 111809607 111818794 + MGP_WSBEiJ_P0032400 9930022D16Rik protein_coding protein_coding MGP_WSBEiJ_T0031758.1 MGP_WSBEiJ_G0018555.1 mouse_genomes_project 11 103335965 103349284 + MGP_WSBEiJ_P0031758 Rundc1 protein_coding protein_coding MGP_WSBEiJ_T0030092.1 MGP_WSBEiJ_G0018108.1 mouse_genomes_project 11 77757979 77774707 + MGP_WSBEiJ_P0030092 Git1 protein_coding protein_coding MGP_WSBEiJ_T0030093.1 MGP_WSBEiJ_G0018108.1 mouse_genomes_project 11 77757988 77774707 + MGP_WSBEiJ_P0030093 Git1 protein_coding protein_coding MGP_WSBEiJ_T0030094.1 MGP_WSBEiJ_G0018108.1 mouse_genomes_project 11 77765088 77770036 + Git1 protein_coding retained_intron MGP_WSBEiJ_T0030095.1 MGP_WSBEiJ_G0018108.1 mouse_genomes_project 11 77767908 77772006 + Git1 protein_coding retained_intron MGP_WSBEiJ_T0030096.1 MGP_WSBEiJ_G0018108.1 mouse_genomes_project 11 77769399 77771753 + Git1 protein_coding retained_intron MGP_WSBEiJ_T0030097.1 MGP_WSBEiJ_G0018108.1 mouse_genomes_project 11 77772056 77772960 + Git1 protein_coding retained_intron MGP_WSBEiJ_T0097490.1 MGP_WSBEiJ_G0036157.1 mouse_genomes_project 11 99855231 99857280 + Gm20644 sense_overlapping sense_overlapping MGP_WSBEiJ_T0027924.1 MGP_WSBEiJ_G0017560.1 mouse_genomes_project 11 44613050 44681260 - MGP_WSBEiJ_P0027924 Itk protein_coding protein_coding MGP_WSBEiJ_T0027925.1 MGP_WSBEiJ_G0017560.1 mouse_genomes_project 11 44613050 44681282 - MGP_WSBEiJ_P0027925 Itk protein_coding protein_coding MGP_WSBEiJ_T0027926.1 MGP_WSBEiJ_G0017560.1 mouse_genomes_project 11 44632270 44681224 - MGP_WSBEiJ_P0027926 Itk protein_coding protein_coding MGP_WSBEiJ_T0027927.1 MGP_WSBEiJ_G0017560.1 mouse_genomes_project 11 44652033 44681228 - Itk protein_coding retained_intron MGP_WSBEiJ_T0012226.1 MGP_WSBEiJ_G0010356.1 mouse_genomes_project 11 7366762 7367677 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003209.1 MGP_WSBEiJ_G0002972.1 mouse_genomes_project 11 99238075 99240147 + Gm11614 antisense antisense MGP_WSBEiJ_T0003250.1 MGP_WSBEiJ_G0003006.1 mouse_genomes_project 11 109693208 109695209 + Gm11712 antisense antisense MGP_WSBEiJ_T0006085.1 MGP_WSBEiJ_G0005081.1 mouse_genomes_project 11 15673291 15699816 - Gm12022 lincRNA lincRNA MGP_WSBEiJ_T0031462.1 MGP_WSBEiJ_G0018451.1 mouse_genomes_project 11 101165916 101175656 - MGP_WSBEiJ_P0031462 Krt20 protein_coding protein_coding MGP_WSBEiJ_T0098894.1 MGP_WSBEiJ_G0037557.1 mouse_genomes_project 11 3549126 3549215 - Gm24000 snoRNA snoRNA MGP_WSBEiJ_T0028499.1 MGP_WSBEiJ_G0017717.1 mouse_genomes_project 11 57460497 57471132 + MGP_WSBEiJ_P0028499 Gm12253 protein_coding protein_coding MGP_WSBEiJ_T0030496.1 MGP_WSBEiJ_G0018208.1 mouse_genomes_project 11 84107511 84112194 + MGP_WSBEiJ_P0030496 1700020L24Rik protein_coding protein_coding MGP_WSBEiJ_T0030497.1 MGP_WSBEiJ_G0018208.1 mouse_genomes_project 11 84111247 84111789 + MGP_WSBEiJ_P0030497 1700020L24Rik protein_coding protein_coding MGP_WSBEiJ_T0033398.1 MGP_WSBEiJ_G0018886.1 mouse_genomes_project 11 123999166 124017867 - MGP_WSBEiJ_P0033398 Fasn protein_coding protein_coding MGP_WSBEiJ_T0033399.1 MGP_WSBEiJ_G0018886.1 mouse_genomes_project 11 124000423 124017415 - MGP_WSBEiJ_P0033399 Fasn protein_coding protein_coding MGP_WSBEiJ_T0033400.1 MGP_WSBEiJ_G0018886.1 mouse_genomes_project 11 124000865 124001924 - Fasn protein_coding retained_intron MGP_WSBEiJ_T0033401.1 MGP_WSBEiJ_G0018886.1 mouse_genomes_project 11 124001882 124003020 - Fasn protein_coding retained_intron MGP_WSBEiJ_T0033402.1 MGP_WSBEiJ_G0018886.1 mouse_genomes_project 11 124007813 124008774 - Fasn protein_coding retained_intron MGP_WSBEiJ_T0033403.1 MGP_WSBEiJ_G0018886.1 mouse_genomes_project 11 124016091 124017100 - MGP_WSBEiJ_P0033403 Fasn protein_coding protein_coding MGP_WSBEiJ_T0003119.1 MGP_WSBEiJ_G0002901.1 mouse_genomes_project 11 61880886 61881634 + Gm12949 antisense antisense MGP_WSBEiJ_T0012318.1 MGP_WSBEiJ_G0010448.1 mouse_genomes_project 11 41602823 41603113 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027615.1 MGP_WSBEiJ_G0017477.1 mouse_genomes_project 11 27183794 27190792 + MGP_WSBEiJ_P0027615 Mtif2 protein_coding protein_coding MGP_WSBEiJ_T0027616.1 MGP_WSBEiJ_G0017477.1 mouse_genomes_project 11 27183822 27191311 + MGP_WSBEiJ_P0027616 Mtif2 protein_coding protein_coding MGP_WSBEiJ_T0027617.1 MGP_WSBEiJ_G0017477.1 mouse_genomes_project 11 27183833 27187613 + Mtif2 protein_coding processed_transcript MGP_WSBEiJ_T0027618.1 MGP_WSBEiJ_G0017477.1 mouse_genomes_project 11 27183834 27208529 + MGP_WSBEiJ_P0027618 Mtif2 protein_coding protein_coding MGP_WSBEiJ_T0027619.1 MGP_WSBEiJ_G0017477.1 mouse_genomes_project 11 27183836 27197570 + MGP_WSBEiJ_P0027619 Mtif2 protein_coding protein_coding MGP_WSBEiJ_T0027620.1 MGP_WSBEiJ_G0017477.1 mouse_genomes_project 11 27183843 27208499 + MGP_WSBEiJ_P0027620 Mtif2 protein_coding protein_coding MGP_WSBEiJ_T0027621.1 MGP_WSBEiJ_G0017477.1 mouse_genomes_project 11 27190684 27197677 + MGP_WSBEiJ_P0027621 Mtif2 protein_coding protein_coding MGP_WSBEiJ_T0027622.1 MGP_WSBEiJ_G0017477.1 mouse_genomes_project 11 27197375 27199428 + Mtif2 protein_coding processed_transcript MGP_WSBEiJ_T0028731.1 MGP_WSBEiJ_G0017791.1 mouse_genomes_project 11 60157798 60169432 - MGP_WSBEiJ_P0028731 Natd1 protein_coding protein_coding MGP_WSBEiJ_T0028732.1 MGP_WSBEiJ_G0017791.1 mouse_genomes_project 11 60161506 60170370 - Natd1 protein_coding processed_transcript MGP_WSBEiJ_T0011118.1 MGP_WSBEiJ_G0009275.1 mouse_genomes_project 11 102616995 102617283 - Gm24358 misc_RNA misc_RNA MGP_WSBEiJ_T0097690.1 MGP_WSBEiJ_G0036353.1 mouse_genomes_project 11 39083165 39083321 - Gm24446 snRNA snRNA MGP_WSBEiJ_T0006252.1 MGP_WSBEiJ_G0005213.1 mouse_genomes_project 11 111737025 111745117 + 1700096J18Rik lincRNA lincRNA MGP_WSBEiJ_T0027159.1 MGP_WSBEiJ_G0017370.1 mouse_genomes_project 11 2208671 2374608 - MGP_WSBEiJ_P0027159 Znrf3 protein_coding protein_coding MGP_WSBEiJ_T0027160.1 MGP_WSBEiJ_G0017370.1 mouse_genomes_project 11 2210965 2309965 - MGP_WSBEiJ_P0027160 Znrf3 protein_coding protein_coding MGP_WSBEiJ_T0027161.1 MGP_WSBEiJ_G0017370.1 mouse_genomes_project 11 2221145 2374608 - MGP_WSBEiJ_P0027161 Znrf3 protein_coding protein_coding MGP_WSBEiJ_T0030406.1 MGP_WSBEiJ_G0018178.1 mouse_genomes_project 11 81365126 81380489 + MGP_WSBEiJ_P0030406 Spaca3 protein_coding protein_coding MGP_WSBEiJ_T0030407.1 MGP_WSBEiJ_G0018178.1 mouse_genomes_project 11 81365133 81380493 + MGP_WSBEiJ_P0030407 Spaca3 protein_coding protein_coding MGP_WSBEiJ_T0000810.1 MGP_WSBEiJ_G0000749.1 mouse_genomes_project 11 15641398 15641994 + TEC TEC MGP_WSBEiJ_T0012480.1 MGP_WSBEiJ_G0010610.1 mouse_genomes_project 11 107195954 107196994 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003278.1 MGP_WSBEiJ_G0003026.1 mouse_genomes_project 11 120242726 120251087 - Gm16045 antisense antisense MGP_WSBEiJ_T0012455.1 MGP_WSBEiJ_G0010585.1 mouse_genomes_project 11 98567236 98567630 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033185.1 MGP_WSBEiJ_G0018845.1 mouse_genomes_project 11 123252968 123262300 - MGP_WSBEiJ_P0033185 Enthd2 protein_coding protein_coding MGP_WSBEiJ_T0033186.1 MGP_WSBEiJ_G0018845.1 mouse_genomes_project 11 123252968 123262300 - MGP_WSBEiJ_P0033186 Enthd2 protein_coding protein_coding MGP_WSBEiJ_T0033187.1 MGP_WSBEiJ_G0018845.1 mouse_genomes_project 11 123252968 123262300 - MGP_WSBEiJ_P0033187 Enthd2 protein_coding protein_coding MGP_WSBEiJ_T0033188.1 MGP_WSBEiJ_G0018845.1 mouse_genomes_project 11 123256597 123260954 - Enthd2 protein_coding processed_transcript MGP_WSBEiJ_T0033189.1 MGP_WSBEiJ_G0018845.1 mouse_genomes_project 11 123259098 123260829 - Enthd2 protein_coding processed_transcript MGP_WSBEiJ_T0033190.1 MGP_WSBEiJ_G0018845.1 mouse_genomes_project 11 123260467 123262269 - Enthd2 protein_coding processed_transcript MGP_WSBEiJ_T0029015.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67027388 67245581 + Gas7 protein_coding processed_transcript MGP_WSBEiJ_T0029016.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67121596 67159591 + Gas7 protein_coding processed_transcript MGP_WSBEiJ_T0029017.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67160559 67183130 + Gas7 protein_coding processed_transcript MGP_WSBEiJ_T0029018.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67160595 67270865 + MGP_WSBEiJ_P0029018 Gas7 protein_coding protein_coding MGP_WSBEiJ_T0029019.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67172221 67263680 + MGP_WSBEiJ_P0029019 Gas7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029020.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67172258 67252598 + Gas7 protein_coding processed_transcript MGP_WSBEiJ_T0029021.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67172268 67245566 + Gas7 protein_coding processed_transcript MGP_WSBEiJ_T0029022.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67231660 67263917 + Gas7 protein_coding processed_transcript MGP_WSBEiJ_T0029024.1 MGP_WSBEiJ_G0017853.1 mouse_genomes_project 11 67262400 67263793 + Gas7 protein_coding processed_transcript MGP_WSBEiJ_T0016650.1 MGP_WSBEiJ_G0014617.1 mouse_genomes_project 11 98513946 98516692 - Gm11574 processed_transcript processed_transcript MGP_WSBEiJ_T0032478.1 MGP_WSBEiJ_G0018707.1 mouse_genomes_project 11 116336435 116351906 + MGP_WSBEiJ_P0032478 Cog1 protein_coding protein_coding MGP_WSBEiJ_T0032479.1 MGP_WSBEiJ_G0018707.1 mouse_genomes_project 11 116336594 116351619 + MGP_WSBEiJ_P0032479 Cog1 protein_coding protein_coding MGP_WSBEiJ_T0032480.1 MGP_WSBEiJ_G0018707.1 mouse_genomes_project 11 116344189 116345756 + Cog1 protein_coding retained_intron MGP_WSBEiJ_T0032481.1 MGP_WSBEiJ_G0018707.1 mouse_genomes_project 11 116346881 116356770 + MGP_WSBEiJ_P0032481 Cog1 protein_coding protein_coding MGP_WSBEiJ_T0032482.1 MGP_WSBEiJ_G0018707.1 mouse_genomes_project 11 116347018 116350849 + MGP_WSBEiJ_P0032482 Cog1 protein_coding protein_coding MGP_WSBEiJ_T0032483.1 MGP_WSBEiJ_G0018707.1 mouse_genomes_project 11 116347036 116350885 + MGP_WSBEiJ_P0032483 Cog1 protein_coding protein_coding MGP_WSBEiJ_T0032484.1 MGP_WSBEiJ_G0018707.1 mouse_genomes_project 11 116348083 116351620 + MGP_WSBEiJ_P0032484 Cog1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032485.1 MGP_WSBEiJ_G0018707.1 mouse_genomes_project 11 116348788 116351620 + MGP_WSBEiJ_P0032485 Cog1 protein_coding protein_coding MGP_WSBEiJ_T0030990.1 MGP_WSBEiJ_G0018326.1 mouse_genomes_project 11 95926598 95936534 - MGP_WSBEiJ_P0030990 Gm11541 protein_coding protein_coding MGP_WSBEiJ_T0030355.1 MGP_WSBEiJ_G0018167.1 mouse_genomes_project 11 80589539 80595028 - MGP_WSBEiJ_P0030355 Tefm protein_coding protein_coding MGP_WSBEiJ_T0030356.1 MGP_WSBEiJ_G0018167.1 mouse_genomes_project 11 80589539 80592762 - MGP_WSBEiJ_P0030356 Tefm protein_coding protein_coding MGP_WSBEiJ_T0030357.1 MGP_WSBEiJ_G0018167.1 mouse_genomes_project 11 80590807 80594996 - MGP_WSBEiJ_P0030357 Tefm protein_coding protein_coding MGP_WSBEiJ_T0031475.1 MGP_WSBEiJ_G0018462.1 mouse_genomes_project 11 101337785 101338553 - MGP_WSBEiJ_P0031475 Krtap9-3 protein_coding protein_coding MGP_WSBEiJ_T0031228.1 MGP_WSBEiJ_G0018390.1 mouse_genomes_project 11 98987346 98997522 - MGP_WSBEiJ_P0031228 4933428G20Rik protein_coding protein_coding MGP_WSBEiJ_T0006231.1 MGP_WSBEiJ_G0005198.1 mouse_genomes_project 11 97061951 97063917 - Gm9796 lincRNA lincRNA MGP_WSBEiJ_T0016660.1 MGP_WSBEiJ_G0014626.1 mouse_genomes_project 11 105335998 105338881 - 1700028N14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0028836.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61262989 61432938 + Specc1 protein_coding retained_intron MGP_WSBEiJ_T0028837.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61262989 61451608 + MGP_WSBEiJ_P0028837 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028838.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61263005 61452054 + MGP_WSBEiJ_P0028838 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028839.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61263036 61356804 + Specc1 protein_coding retained_intron MGP_WSBEiJ_T0028840.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61263041 61538583 + MGP_WSBEiJ_P0028840 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028841.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61284292 61386749 + Specc1 protein_coding processed_transcript MGP_WSBEiJ_T0028842.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61316428 61451608 + MGP_WSBEiJ_P0028842 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028843.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61330526 61455252 + MGP_WSBEiJ_P0028843 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028844.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61330542 61539112 + MGP_WSBEiJ_P0028844 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028845.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61341451 61541817 + MGP_WSBEiJ_P0028845 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028846.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61341474 61543701 + MGP_WSBEiJ_P0028846 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028847.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61390036 61543693 + MGP_WSBEiJ_P0028847 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028848.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61390040 61538732 + MGP_WSBEiJ_P0028848 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028849.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61390086 61391361 + Specc1 protein_coding retained_intron MGP_WSBEiJ_T0028850.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61390100 61451621 + MGP_WSBEiJ_P0028850 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028851.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61390132 61452053 + MGP_WSBEiJ_P0028851 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0028852.1 MGP_WSBEiJ_G0017811.1 mouse_genomes_project 11 61390138 61543701 + MGP_WSBEiJ_P0028852 Specc1 protein_coding protein_coding MGP_WSBEiJ_T0033462.1 MGP_WSBEiJ_G0018901.1 mouse_genomes_project 11 124541851 124573517 - MGP_WSBEiJ_P0033462 Wdr45b protein_coding unknown_likely_coding MGP_WSBEiJ_T0033463.1 MGP_WSBEiJ_G0018901.1 mouse_genomes_project 11 124544787 124559411 - Wdr45b protein_coding processed_transcript MGP_WSBEiJ_T0033464.1 MGP_WSBEiJ_G0018901.1 mouse_genomes_project 11 124547649 124573477 - MGP_WSBEiJ_P0033464 Wdr45b protein_coding protein_coding MGP_WSBEiJ_T0033465.1 MGP_WSBEiJ_G0018901.1 mouse_genomes_project 11 124552752 124573529 - MGP_WSBEiJ_P0033465 Wdr45b protein_coding protein_coding MGP_WSBEiJ_T0033466.1 MGP_WSBEiJ_G0018901.1 mouse_genomes_project 11 124566168 124573537 - Wdr45b protein_coding retained_intron MGP_WSBEiJ_T0006109.1 MGP_WSBEiJ_G0005103.1 mouse_genomes_project 11 22759570 22781910 + Gm12069 lincRNA lincRNA MGP_WSBEiJ_T0012271.1 MGP_WSBEiJ_G0010401.1 mouse_genomes_project 11 23904966 23906232 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006160.1 MGP_WSBEiJ_G0005147.1 mouse_genomes_project 11 61255065 61256887 + Gm12273 lincRNA lincRNA MGP_WSBEiJ_T0009525.1 MGP_WSBEiJ_G0007682.1 mouse_genomes_project 11 48420208 48420321 + Gm23492 miRNA miRNA MGP_WSBEiJ_T0003106.1 MGP_WSBEiJ_G0002891.1 mouse_genomes_project 11 58135694 58140883 + Gm10435 antisense antisense MGP_WSBEiJ_T0003107.1 MGP_WSBEiJ_G0002891.1 mouse_genomes_project 11 58135694 58140883 + Gm10435 antisense antisense MGP_WSBEiJ_T0012217.1 MGP_WSBEiJ_G0010347.1 mouse_genomes_project 11 3423526 3423846 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006190.1 MGP_WSBEiJ_G0005171.1 mouse_genomes_project 11 78215541 78233327 - Gm11190 lincRNA lincRNA MGP_WSBEiJ_T0031753.1 MGP_WSBEiJ_G0018554.1 mouse_genomes_project 11 103329697 103336214 - MGP_WSBEiJ_P0031753 Ptges3l protein_coding protein_coding MGP_WSBEiJ_T0031754.1 MGP_WSBEiJ_G0018554.1 mouse_genomes_project 11 103329697 103335550 - MGP_WSBEiJ_P0031754 Ptges3l protein_coding protein_coding MGP_WSBEiJ_T0031755.1 MGP_WSBEiJ_G0018554.1 mouse_genomes_project 11 103331755 103335550 - MGP_WSBEiJ_P0031755 Ptges3l protein_coding protein_coding MGP_WSBEiJ_T0031756.1 MGP_WSBEiJ_G0018554.1 mouse_genomes_project 11 103332302 103334737 - MGP_WSBEiJ_P0031756 Ptges3l protein_coding protein_coding MGP_WSBEiJ_T0031757.1 MGP_WSBEiJ_G0018554.1 mouse_genomes_project 11 103332718 103335113 - Ptges3l protein_coding retained_intron MGP_WSBEiJ_T0006241.1 MGP_WSBEiJ_G0005204.1 mouse_genomes_project 11 101901033 101907362 - Gm12347 lincRNA lincRNA MGP_WSBEiJ_T0033218.1 MGP_WSBEiJ_G0018850.1 mouse_genomes_project 11 123516547 123519060 + MGP_WSBEiJ_P0033218 0610009L18Rik protein_coding protein_coding MGP_WSBEiJ_T0032710.1 MGP_WSBEiJ_G0018756.1 mouse_genomes_project 11 118658702 118673063 - MGP_WSBEiJ_P0032710 Caskin2 protein_coding protein_coding MGP_WSBEiJ_T0032711.1 MGP_WSBEiJ_G0018756.1 mouse_genomes_project 11 118659519 118660401 - Caskin2 protein_coding processed_transcript MGP_WSBEiJ_T0032712.1 MGP_WSBEiJ_G0018756.1 mouse_genomes_project 11 118664254 118667542 - MGP_WSBEiJ_P0032712 Caskin2 protein_coding protein_coding MGP_WSBEiJ_T0032713.1 MGP_WSBEiJ_G0018756.1 mouse_genomes_project 11 118666216 118673072 - MGP_WSBEiJ_P0032713 Caskin2 protein_coding protein_coding MGP_WSBEiJ_T0003128.1 MGP_WSBEiJ_G0002909.1 mouse_genomes_project 11 62342804 62343459 - Cdrt4os2 antisense antisense MGP_WSBEiJ_T0009611.1 MGP_WSBEiJ_G0007768.1 mouse_genomes_project 11 109193802 109193906 - Gm27322 miRNA miRNA MGP_WSBEiJ_T0032553.1 MGP_WSBEiJ_G0018726.1 mouse_genomes_project 11 117849998 117862594 - MGP_WSBEiJ_P0032553 Cd300e protein_coding protein_coding MGP_WSBEiJ_T0003168.1 MGP_WSBEiJ_G0002942.1 mouse_genomes_project 11 82134649 82140783 + Gm11418 antisense antisense MGP_WSBEiJ_T0030833.1 MGP_WSBEiJ_G0018293.1 mouse_genomes_project 11 90421634 90821260 - MGP_WSBEiJ_P0030833 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030834.1 MGP_WSBEiJ_G0018293.1 mouse_genomes_project 11 90454249 90674817 - MGP_WSBEiJ_P0030834 protein_coding protein_coding MGP_WSBEiJ_T0030835.1 MGP_WSBEiJ_G0018293.1 mouse_genomes_project 11 90454348 90575343 - MGP_WSBEiJ_P0030835 protein_coding protein_coding MGP_WSBEiJ_T0032948.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119788782 119812342 + MGP_WSBEiJ_P0032948 Mfsd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032949.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119789637 119795245 + Mfsd11 protein_coding retained_intron MGP_WSBEiJ_T0032950.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119789817 119790402 + Mfsd11 protein_coding processed_transcript MGP_WSBEiJ_T0032951.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119790105 119812349 + MGP_WSBEiJ_P0032951 Mfsd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032952.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119790122 119790600 + Mfsd11 protein_coding retained_intron MGP_WSBEiJ_T0032953.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119790163 119813087 + MGP_WSBEiJ_P0032953 Mfsd11 protein_coding protein_coding MGP_WSBEiJ_T0032954.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119790172 119791060 + Mfsd11 protein_coding retained_intron MGP_WSBEiJ_T0032955.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119790238 119813087 + MGP_WSBEiJ_P0032955 Mfsd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032956.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119790369 119811797 + MGP_WSBEiJ_P0032956 Mfsd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032957.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119790421 119811575 + MGP_WSBEiJ_P0032957 Mfsd11 protein_coding protein_coding MGP_WSBEiJ_T0032958.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119795272 119797946 + Mfsd11 protein_coding retained_intron MGP_WSBEiJ_T0032959.1 MGP_WSBEiJ_G0018798.1 mouse_genomes_project 11 119804668 119811467 + Mfsd11 protein_coding processed_transcript MGP_WSBEiJ_T0012420.1 MGP_WSBEiJ_G0010550.1 mouse_genomes_project 11 81329466 81329880 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028815.1 MGP_WSBEiJ_G0017805.1 mouse_genomes_project 11 60940633 60959608 + MGP_WSBEiJ_P0028815 Grap protein_coding protein_coding MGP_WSBEiJ_T0028816.1 MGP_WSBEiJ_G0017805.1 mouse_genomes_project 11 60955991 60956826 + Grap protein_coding processed_transcript MGP_WSBEiJ_T0032354.1 MGP_WSBEiJ_G0018677.1 mouse_genomes_project 11 110035571 110048911 - MGP_WSBEiJ_P0032354 Cacng1 protein_coding protein_coding MGP_WSBEiJ_T0028281.1 MGP_WSBEiJ_G0017658.1 mouse_genomes_project 11 52199759 52200490 - MGP_WSBEiJ_P0028281 Gm9837 protein_coding protein_coding MGP_WSBEiJ_T0000812.1 MGP_WSBEiJ_G0000751.1 mouse_genomes_project 11 16083088 16084645 - TEC TEC MGP_WSBEiJ_T0012352.1 MGP_WSBEiJ_G0010482.1 mouse_genomes_project 11 55189896 55190125 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028946.1 MGP_WSBEiJ_G0017833.1 mouse_genomes_project 11 63888426 63889924 - MGP_WSBEiJ_P0028946 F930015N05Rik protein_coding protein_coding MGP_WSBEiJ_T0029235.1 MGP_WSBEiJ_G0017902.1 mouse_genomes_project 11 69369244 69372346 - MGP_WSBEiJ_P0029235 Shbg protein_coding protein_coding MGP_WSBEiJ_T0029236.1 MGP_WSBEiJ_G0017902.1 mouse_genomes_project 11 69370088 69371381 - Shbg protein_coding processed_transcript MGP_WSBEiJ_T0012477.1 MGP_WSBEiJ_G0010607.1 mouse_genomes_project 11 106966103 106967196 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031640.1 MGP_WSBEiJ_G0018528.1 mouse_genomes_project 11 102815272 102835375 - MGP_WSBEiJ_P0031640 Ptrf protein_coding protein_coding MGP_WSBEiJ_T0031641.1 MGP_WSBEiJ_G0018528.1 mouse_genomes_project 11 102828886 102835039 - Ptrf protein_coding processed_transcript MGP_WSBEiJ_T0029814.1 MGP_WSBEiJ_G0018039.1 mouse_genomes_project 11 73972976 73973915 - MGP_WSBEiJ_P0029814 Olfr395 protein_coding protein_coding MGP_WSBEiJ_T0029650.1 MGP_WSBEiJ_G0017985.1 mouse_genomes_project 11 70873663 70879234 + MGP_WSBEiJ_P0029650 Mis12 protein_coding protein_coding MGP_WSBEiJ_T0029651.1 MGP_WSBEiJ_G0017985.1 mouse_genomes_project 11 70873663 70881427 + MGP_WSBEiJ_P0029651 Mis12 protein_coding protein_coding MGP_WSBEiJ_T0029652.1 MGP_WSBEiJ_G0017985.1 mouse_genomes_project 11 70873663 70880122 + MGP_WSBEiJ_P0029652 Mis12 protein_coding protein_coding MGP_WSBEiJ_T0029653.1 MGP_WSBEiJ_G0017985.1 mouse_genomes_project 11 70873911 70879223 + MGP_WSBEiJ_P0029653 Mis12 protein_coding protein_coding MGP_WSBEiJ_T0029654.1 MGP_WSBEiJ_G0017985.1 mouse_genomes_project 11 70873914 70879214 + MGP_WSBEiJ_P0029654 Mis12 protein_coding protein_coding MGP_WSBEiJ_T0029655.1 MGP_WSBEiJ_G0017985.1 mouse_genomes_project 11 70873943 70879251 + MGP_WSBEiJ_P0029655 Mis12 protein_coding protein_coding MGP_WSBEiJ_T0100473.1 MGP_WSBEiJ_G0038932.1 mouse_genomes_project 11 57627050 57627442 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0033146.1 MGP_WSBEiJ_G0018839.1 mouse_genomes_project 11 122677142 122686208 - MGP_WSBEiJ_P0033146 Nptx1 protein_coding protein_coding MGP_WSBEiJ_T0016669.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115253898 115305039 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016670.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115254792 115263670 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016671.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115254817 115260849 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016672.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115260651 115269552 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016673.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115261637 115263670 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016674.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115263546 115304605 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016675.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115263633 115305023 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016676.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115269621 115285377 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016677.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115269737 115305045 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016678.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115269812 115305023 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016679.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115276784 115285536 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016680.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115276895 115305046 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016681.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115277002 115305039 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016682.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115281644 115305024 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016683.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115281644 115305024 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016684.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115281646 115381746 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016685.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115285341 115305022 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0016686.1 MGP_WSBEiJ_G0014634.1 mouse_genomes_project 11 115312530 115341677 - BC006965 processed_transcript processed_transcript MGP_WSBEiJ_T0028733.1 MGP_WSBEiJ_G0017792.1 mouse_genomes_project 11 60187737 60208466 + MGP_WSBEiJ_P0028733 Map2k3 protein_coding protein_coding MGP_WSBEiJ_T0028734.1 MGP_WSBEiJ_G0017792.1 mouse_genomes_project 11 60187758 60203257 + Map2k3 protein_coding retained_intron MGP_WSBEiJ_T0028735.1 MGP_WSBEiJ_G0017792.1 mouse_genomes_project 11 60187758 60197794 + Map2k3 protein_coding retained_intron MGP_WSBEiJ_T0028736.1 MGP_WSBEiJ_G0017792.1 mouse_genomes_project 11 60187770 60208449 + MGP_WSBEiJ_P0028736 Map2k3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028737.1 MGP_WSBEiJ_G0017792.1 mouse_genomes_project 11 60197557 60202437 + Map2k3 protein_coding processed_transcript MGP_WSBEiJ_T0028738.1 MGP_WSBEiJ_G0017792.1 mouse_genomes_project 11 60206316 60207476 + Map2k3 protein_coding retained_intron MGP_WSBEiJ_T0029087.1 MGP_WSBEiJ_G0017870.1 mouse_genomes_project 11 68585384 68591717 - MGP_WSBEiJ_P0029087 Odf4 protein_coding protein_coding MGP_WSBEiJ_T0029088.1 MGP_WSBEiJ_G0017870.1 mouse_genomes_project 11 68585385 68591749 - MGP_WSBEiJ_P0029088 Odf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029089.1 MGP_WSBEiJ_G0017870.1 mouse_genomes_project 11 68585512 68591484 - MGP_WSBEiJ_P0029089 Odf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029090.1 MGP_WSBEiJ_G0017870.1 mouse_genomes_project 11 68586368 68591742 - MGP_WSBEiJ_P0029090 Odf4 protein_coding protein_coding MGP_WSBEiJ_T0003193.1 MGP_WSBEiJ_G0002959.1 mouse_genomes_project 11 96677043 96679694 - antisense antisense MGP_WSBEiJ_T0028145.1 MGP_WSBEiJ_G0017623.1 mouse_genomes_project 11 49473528 49484185 - MGP_WSBEiJ_P0028145 Zfp354b protein_coding protein_coding MGP_WSBEiJ_T0028146.1 MGP_WSBEiJ_G0017623.1 mouse_genomes_project 11 49480505 49484158 - MGP_WSBEiJ_P0028146 Zfp354b protein_coding unknown_likely_coding MGP_WSBEiJ_T0028147.1 MGP_WSBEiJ_G0017623.1 mouse_genomes_project 11 49481120 49483201 - Zfp354b protein_coding processed_transcript MGP_WSBEiJ_T0028032.1 MGP_WSBEiJ_G0017593.1 mouse_genomes_project 11 47893776 47894849 + MGP_WSBEiJ_P0028032 Olfr1389 protein_coding protein_coding MGP_WSBEiJ_T0031426.1 MGP_WSBEiJ_G0018438.1 mouse_genomes_project 11 100687914 100728202 - MGP_WSBEiJ_P0031426 Top2a protein_coding unknown_likely_coding MGP_WSBEiJ_T0031427.1 MGP_WSBEiJ_G0018438.1 mouse_genomes_project 11 100687915 100728325 - MGP_WSBEiJ_P0031427 Top2a protein_coding protein_coding MGP_WSBEiJ_T0031428.1 MGP_WSBEiJ_G0018438.1 mouse_genomes_project 11 100688043 100691869 - Top2a protein_coding processed_transcript MGP_WSBEiJ_T0031429.1 MGP_WSBEiJ_G0018438.1 mouse_genomes_project 11 100688439 100691515 - Top2a protein_coding processed_transcript MGP_WSBEiJ_T0031430.1 MGP_WSBEiJ_G0018438.1 mouse_genomes_project 11 100696086 100697403 - Top2a protein_coding processed_transcript MGP_WSBEiJ_T0031431.1 MGP_WSBEiJ_G0018438.1 mouse_genomes_project 11 100699765 100707391 - Top2a protein_coding processed_transcript MGP_WSBEiJ_T0031432.1 MGP_WSBEiJ_G0018438.1 mouse_genomes_project 11 100720864 100726344 - Top2a protein_coding processed_transcript MGP_WSBEiJ_T0031433.1 MGP_WSBEiJ_G0018438.1 mouse_genomes_project 11 100726218 100728314 - Top2a protein_coding processed_transcript MGP_WSBEiJ_T0098959.1 MGP_WSBEiJ_G0037622.1 mouse_genomes_project 11 118588812 118588947 + Gm23699 snoRNA snoRNA MGP_WSBEiJ_T0032325.1 MGP_WSBEiJ_G0018671.1 mouse_genomes_project 11 109257685 109270605 - MGP_WSBEiJ_P0032325 Gm10184 protein_coding protein_coding MGP_WSBEiJ_T0032326.1 MGP_WSBEiJ_G0018671.1 mouse_genomes_project 11 109265905 109270433 - MGP_WSBEiJ_P0032326 Gm10184 protein_coding protein_coding MGP_WSBEiJ_T0097676.1 MGP_WSBEiJ_G0036339.1 mouse_genomes_project 11 12546849 12546956 + Gm24707 snRNA snRNA MGP_WSBEiJ_T0031518.1 MGP_WSBEiJ_G0018498.1 mouse_genomes_project 11 101982322 101988669 - MGP_WSBEiJ_P0031518 Krt9 protein_coding protein_coding MGP_WSBEiJ_T0028516.1 MGP_WSBEiJ_G0017729.1 mouse_genomes_project 11 57699015 57711010 + MGP_WSBEiJ_P0028516 Trim58 protein_coding protein_coding MGP_WSBEiJ_T0031318.1 MGP_WSBEiJ_G0018411.1 mouse_genomes_project 11 99767034 99820996 + MGP_WSBEiJ_P0031318 Cdk12 protein_coding protein_coding MGP_WSBEiJ_T0031319.1 MGP_WSBEiJ_G0018411.1 mouse_genomes_project 11 99767289 99816139 + MGP_WSBEiJ_P0031319 Cdk12 protein_coding protein_coding MGP_WSBEiJ_T0031320.1 MGP_WSBEiJ_G0018411.1 mouse_genomes_project 11 99767310 99820477 + MGP_WSBEiJ_P0031320 Cdk12 protein_coding protein_coding MGP_WSBEiJ_T0031321.1 MGP_WSBEiJ_G0018411.1 mouse_genomes_project 11 99786618 99791745 + Cdk12 protein_coding processed_transcript MGP_WSBEiJ_T0031322.1 MGP_WSBEiJ_G0018411.1 mouse_genomes_project 11 99809108 99847721 + Cdk12 protein_coding processed_transcript MGP_WSBEiJ_T0031323.1 MGP_WSBEiJ_G0018411.1 mouse_genomes_project 11 99832940 99837453 + Cdk12 protein_coding processed_transcript MGP_WSBEiJ_T0003166.1 MGP_WSBEiJ_G0002940.1 mouse_genomes_project 11 81595923 81606804 + Gm11417 antisense antisense MGP_WSBEiJ_T0031256.1 MGP_WSBEiJ_G0018398.1 mouse_genomes_project 11 99260236 99265926 - Cwc25 protein_coding processed_transcript MGP_WSBEiJ_T0031257.1 MGP_WSBEiJ_G0018398.1 mouse_genomes_project 11 99260370 99282131 - MGP_WSBEiJ_P0031257 Cwc25 protein_coding protein_coding MGP_WSBEiJ_T0031258.1 MGP_WSBEiJ_G0018398.1 mouse_genomes_project 11 99262423 99267112 - MGP_WSBEiJ_P0031258 Cwc25 protein_coding protein_coding MGP_WSBEiJ_T0031259.1 MGP_WSBEiJ_G0018398.1 mouse_genomes_project 11 99271826 99282115 - MGP_WSBEiJ_P0031259 Cwc25 protein_coding protein_coding MGP_WSBEiJ_T0003045.1 MGP_WSBEiJ_G0002838.1 mouse_genomes_project 11 3453370 3469612 + Gm11973 antisense antisense MGP_WSBEiJ_T0003046.1 MGP_WSBEiJ_G0002838.1 mouse_genomes_project 11 3453410 3472851 + Gm11973 antisense antisense MGP_WSBEiJ_T0003047.1 MGP_WSBEiJ_G0002838.1 mouse_genomes_project 11 3453422 3472851 + Gm11973 antisense antisense MGP_WSBEiJ_T0027941.1 MGP_WSBEiJ_G0017564.1 mouse_genomes_project 11 44806349 44821536 + MGP_WSBEiJ_P0027941 protein_coding protein_coding MGP_WSBEiJ_T0016661.1 MGP_WSBEiJ_G0014627.1 mouse_genomes_project 11 105792459 105817547 + C130046K22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016662.1 MGP_WSBEiJ_G0014627.1 mouse_genomes_project 11 105792459 105797752 + C130046K22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0006249.1 MGP_WSBEiJ_G0005210.1 mouse_genomes_project 11 105013405 105019435 - 2410004I01Rik lincRNA lincRNA MGP_WSBEiJ_T0006151.1 MGP_WSBEiJ_G0005139.1 mouse_genomes_project 11 56946159 56949053 - Gm12249 lincRNA lincRNA MGP_WSBEiJ_T0027189.1 MGP_WSBEiJ_G0017379.1 mouse_genomes_project 11 2821445 2837308 + MGP_WSBEiJ_P0027189 Aebp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0027190.1 MGP_WSBEiJ_G0017379.1 mouse_genomes_project 11 2832816 2837303 + MGP_WSBEiJ_P0027190 Aebp1 protein_coding protein_coding MGP_WSBEiJ_T0027191.1 MGP_WSBEiJ_G0017379.1 mouse_genomes_project 11 2834362 2835356 + Aebp1 protein_coding processed_transcript MGP_WSBEiJ_T0003181.1 MGP_WSBEiJ_G0002950.1 mouse_genomes_project 11 88686271 88692323 - Gm11505 antisense antisense MGP_WSBEiJ_T0009584.1 MGP_WSBEiJ_G0007741.1 mouse_genomes_project 11 97339487 97339579 - Mir3063 miRNA miRNA MGP_WSBEiJ_T0012338.1 MGP_WSBEiJ_G0010468.1 mouse_genomes_project 11 52060462 52060850 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100487.1 MGP_WSBEiJ_G0038946.1 mouse_genomes_project 11 84380011 84380922 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0028520.1 MGP_WSBEiJ_G0017733.1 mouse_genomes_project 11 57752327 57753312 + MGP_WSBEiJ_P0028520 protein_coding protein_coding MGP_WSBEiJ_T0016623.1 MGP_WSBEiJ_G0014605.1 mouse_genomes_project 11 83550417 83556782 - Unc45bos processed_transcript processed_transcript MGP_WSBEiJ_T0009582.1 MGP_WSBEiJ_G0007739.1 mouse_genomes_project 11 89314518 89314610 + Mir378b miRNA miRNA MGP_WSBEiJ_T0029457.1 MGP_WSBEiJ_G0017950.1 mouse_genomes_project 11 70032774 70037402 - MGP_WSBEiJ_P0029457 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029462.1 MGP_WSBEiJ_G0017950.1 mouse_genomes_project 11 70032818 70037375 - MGP_WSBEiJ_P0029462 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012366.1 MGP_WSBEiJ_G0010496.1 mouse_genomes_project 11 60066658 60067995 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033294.1 MGP_WSBEiJ_G0018869.1 mouse_genomes_project 11 123791745 123792362 + MGP_WSBEiJ_P0033294 Npb protein_coding protein_coding MGP_WSBEiJ_T0033295.1 MGP_WSBEiJ_G0018869.1 mouse_genomes_project 11 123791745 123792362 + MGP_WSBEiJ_P0033295 Npb protein_coding protein_coding MGP_WSBEiJ_T0033296.1 MGP_WSBEiJ_G0018869.1 mouse_genomes_project 11 123791773 123792302 + MGP_WSBEiJ_P0033296 Npb protein_coding protein_coding MGP_WSBEiJ_T0031940.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104413614 104418164 - MGP_WSBEiJ_P0031940 Slc25a39 protein_coding protein_coding MGP_WSBEiJ_T0031941.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104413614 104418109 - MGP_WSBEiJ_P0031941 Slc25a39 protein_coding protein_coding MGP_WSBEiJ_T0031942.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104413671 104415123 - MGP_WSBEiJ_P0031942 Slc25a39 protein_coding protein_coding MGP_WSBEiJ_T0031943.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104413774 104418126 - Slc25a39 protein_coding retained_intron MGP_WSBEiJ_T0031944.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104414420 104418128 - MGP_WSBEiJ_P0031944 Slc25a39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031945.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104414647 104418076 - Slc25a39 protein_coding retained_intron MGP_WSBEiJ_T0031946.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104414661 104417434 - MGP_WSBEiJ_P0031946 Slc25a39 protein_coding protein_coding MGP_WSBEiJ_T0031947.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104414691 104418107 - MGP_WSBEiJ_P0031947 Slc25a39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031948.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104415018 104418083 - Slc25a39 protein_coding retained_intron MGP_WSBEiJ_T0031949.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104415113 104417935 - MGP_WSBEiJ_P0031949 Slc25a39 protein_coding protein_coding MGP_WSBEiJ_T0031950.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104415238 104417573 - MGP_WSBEiJ_P0031950 Slc25a39 protein_coding protein_coding MGP_WSBEiJ_T0031951.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104415416 104418003 - MGP_WSBEiJ_P0031951 Slc25a39 protein_coding protein_coding MGP_WSBEiJ_T0031952.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104415483 104418565 - MGP_WSBEiJ_P0031952 Slc25a39 protein_coding protein_coding MGP_WSBEiJ_T0031953.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104415652 104417426 - Slc25a39 protein_coding processed_transcript MGP_WSBEiJ_T0031954.1 MGP_WSBEiJ_G0018588.1 mouse_genomes_project 11 104416370 104417502 - Slc25a39 protein_coding retained_intron MGP_WSBEiJ_T0032028.1 MGP_WSBEiJ_G0018602.1 mouse_genomes_project 11 104936780 104938343 + MGP_WSBEiJ_P0032028 Fam187a protein_coding protein_coding MGP_WSBEiJ_T0033094.1 MGP_WSBEiJ_G0018830.1 mouse_genomes_project 11 122235598 122325481 - MGP_WSBEiJ_P0033094 Tbc1d16 protein_coding protein_coding MGP_WSBEiJ_T0033095.1 MGP_WSBEiJ_G0018830.1 mouse_genomes_project 11 122241222 122325452 - MGP_WSBEiJ_P0033095 Tbc1d16 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033096.1 MGP_WSBEiJ_G0018830.1 mouse_genomes_project 11 122304157 122317956 - MGP_WSBEiJ_P0033096 Tbc1d16 protein_coding protein_coding MGP_WSBEiJ_T0032868.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119377617 119401763 - Prpsap1 protein_coding processed_transcript MGP_WSBEiJ_T0032869.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119377617 119401797 - MGP_WSBEiJ_P0032869 Prpsap1 protein_coding protein_coding MGP_WSBEiJ_T0032870.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119378071 119385106 - Prpsap1 protein_coding processed_transcript MGP_WSBEiJ_T0032871.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119378148 119380016 - Prpsap1 protein_coding processed_transcript MGP_WSBEiJ_T0032872.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119378172 119384525 - Prpsap1 protein_coding processed_transcript MGP_WSBEiJ_T0032873.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119384845 119405644 - MGP_WSBEiJ_P0032873 Prpsap1 protein_coding protein_coding MGP_WSBEiJ_T0032874.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119385077 119401738 - Prpsap1 protein_coding processed_transcript MGP_WSBEiJ_T0032875.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119385319 119401784 - MGP_WSBEiJ_P0032875 Prpsap1 protein_coding protein_coding MGP_WSBEiJ_T0032876.1 MGP_WSBEiJ_G0018785.1 mouse_genomes_project 11 119396981 119401776 - Prpsap1 protein_coding processed_transcript MGP_WSBEiJ_T0031469.1 MGP_WSBEiJ_G0018456.1 mouse_genomes_project 11 101296761 101297792 - MGP_WSBEiJ_P0031469 protein_coding protein_coding MGP_WSBEiJ_T0029960.1 MGP_WSBEiJ_G0018080.1 mouse_genomes_project 11 75823414 75848856 + MGP_WSBEiJ_P0029960 Myo1c protein_coding protein_coding MGP_WSBEiJ_T0029961.1 MGP_WSBEiJ_G0018080.1 mouse_genomes_project 11 75829064 75844532 + Myo1c protein_coding retained_intron MGP_WSBEiJ_T0029962.1 MGP_WSBEiJ_G0018080.1 mouse_genomes_project 11 75829099 75847582 + MGP_WSBEiJ_P0029962 Myo1c protein_coding protein_coding MGP_WSBEiJ_T0029963.1 MGP_WSBEiJ_G0018080.1 mouse_genomes_project 11 75829113 75830549 + MGP_WSBEiJ_P0029963 Myo1c protein_coding protein_coding MGP_WSBEiJ_T0029964.1 MGP_WSBEiJ_G0018080.1 mouse_genomes_project 11 75834638 75839774 + Myo1c protein_coding retained_intron MGP_WSBEiJ_T0029965.1 MGP_WSBEiJ_G0018080.1 mouse_genomes_project 11 75839256 75844187 + Myo1c protein_coding retained_intron MGP_WSBEiJ_T0029966.1 MGP_WSBEiJ_G0018080.1 mouse_genomes_project 11 75843038 75845200 + Myo1c protein_coding retained_intron MGP_WSBEiJ_T0029967.1 MGP_WSBEiJ_G0018080.1 mouse_genomes_project 11 75845221 75846673 + Myo1c protein_coding retained_intron MGP_WSBEiJ_T0030003.1 MGP_WSBEiJ_G0018089.1 mouse_genomes_project 11 76386481 76422466 + Fam57a protein_coding processed_transcript MGP_WSBEiJ_T0030004.1 MGP_WSBEiJ_G0018089.1 mouse_genomes_project 11 76410147 76411109 + Fam57a protein_coding retained_intron MGP_WSBEiJ_T0030005.1 MGP_WSBEiJ_G0018089.1 mouse_genomes_project 11 76410184 76417258 + MGP_WSBEiJ_P0030005 Fam57a protein_coding protein_coding MGP_WSBEiJ_T0030006.1 MGP_WSBEiJ_G0018089.1 mouse_genomes_project 11 76410217 76416163 + MGP_WSBEiJ_P0030006 Fam57a protein_coding protein_coding MGP_WSBEiJ_T0029800.1 MGP_WSBEiJ_G0018029.1 mouse_genomes_project 11 73582984 73583923 - MGP_WSBEiJ_P0029800 Olfr382 protein_coding protein_coding MGP_WSBEiJ_T0006181.1 MGP_WSBEiJ_G0005164.1 mouse_genomes_project 11 71691977 71693047 - Gm12326 lincRNA lincRNA MGP_WSBEiJ_T0006182.1 MGP_WSBEiJ_G0005164.1 mouse_genomes_project 11 71692591 71693028 - Gm12326 lincRNA lincRNA MGP_WSBEiJ_T0012392.1 MGP_WSBEiJ_G0010522.1 mouse_genomes_project 11 70334450 70334769 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029100.1 MGP_WSBEiJ_G0017873.1 mouse_genomes_project 11 68646852 68649753 - Rangrf protein_coding processed_transcript MGP_WSBEiJ_T0029101.1 MGP_WSBEiJ_G0017873.1 mouse_genomes_project 11 68646852 68647381 - Rangrf protein_coding processed_transcript MGP_WSBEiJ_T0029102.1 MGP_WSBEiJ_G0017873.1 mouse_genomes_project 11 68646852 68648357 - Rangrf protein_coding processed_transcript MGP_WSBEiJ_T0029103.1 MGP_WSBEiJ_G0017873.1 mouse_genomes_project 11 68646852 68648411 - MGP_WSBEiJ_P0029103 Rangrf protein_coding protein_coding MGP_WSBEiJ_T0029104.1 MGP_WSBEiJ_G0017873.1 mouse_genomes_project 11 68646855 68647723 - Rangrf protein_coding processed_transcript MGP_WSBEiJ_T0029105.1 MGP_WSBEiJ_G0017873.1 mouse_genomes_project 11 68646856 68647825 - Rangrf protein_coding processed_transcript MGP_WSBEiJ_T0029106.1 MGP_WSBEiJ_G0017873.1 mouse_genomes_project 11 68646863 68647748 - Rangrf protein_coding processed_transcript MGP_WSBEiJ_T0029107.1 MGP_WSBEiJ_G0017873.1 mouse_genomes_project 11 68646866 68647576 - Rangrf protein_coding processed_transcript MGP_WSBEiJ_T0027167.1 MGP_WSBEiJ_G0017373.1 mouse_genomes_project 11 2517000 2648403 + MGP_WSBEiJ_P0027167 Ankrd36 protein_coding protein_coding MGP_WSBEiJ_T0027168.1 MGP_WSBEiJ_G0017373.1 mouse_genomes_project 11 2517013 2531601 + MGP_WSBEiJ_P0027168 Ankrd36 protein_coding protein_coding MGP_WSBEiJ_T0027169.1 MGP_WSBEiJ_G0017373.1 mouse_genomes_project 11 2517133 2616094 + MGP_WSBEiJ_P0027169 Ankrd36 protein_coding protein_coding MGP_WSBEiJ_T0027170.1 MGP_WSBEiJ_G0017373.1 mouse_genomes_project 11 2521399 2531451 + Ankrd36 protein_coding processed_transcript MGP_WSBEiJ_T0027171.1 MGP_WSBEiJ_G0017373.1 mouse_genomes_project 11 2583677 2603029 + MGP_WSBEiJ_P0027171 Ankrd36 protein_coding protein_coding MGP_WSBEiJ_T0031677.1 MGP_WSBEiJ_G0018537.1 mouse_genomes_project 11 103034169 103040271 + MGP_WSBEiJ_P0031677 Tubg2 protein_coding protein_coding MGP_WSBEiJ_T0097731.1 MGP_WSBEiJ_G0036394.1 mouse_genomes_project 11 100011977 100012068 - Gm25048 snRNA snRNA MGP_WSBEiJ_T0030362.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80663474 80728086 + MGP_WSBEiJ_P0030362 Rhot1 protein_coding protein_coding MGP_WSBEiJ_T0030363.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80663519 80729181 + MGP_WSBEiJ_P0030363 Rhot1 protein_coding protein_coding MGP_WSBEiJ_T0030364.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80663548 80728760 + MGP_WSBEiJ_P0030364 Rhot1 protein_coding protein_coding MGP_WSBEiJ_T0030365.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80663577 80708919 + Rhot1 protein_coding retained_intron MGP_WSBEiJ_T0030366.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80663583 80728041 + MGP_WSBEiJ_P0030366 Rhot1 protein_coding protein_coding MGP_WSBEiJ_T0030367.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80663611 80703285 + Rhot1 protein_coding retained_intron MGP_WSBEiJ_T0030368.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80663751 80727133 + MGP_WSBEiJ_P0030368 Rhot1 protein_coding protein_coding MGP_WSBEiJ_T0030369.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80706555 80728012 + Rhot1 protein_coding processed_transcript MGP_WSBEiJ_T0030370.1 MGP_WSBEiJ_G0018170.1 mouse_genomes_project 11 80709358 80712544 + Rhot1 protein_coding retained_intron MGP_WSBEiJ_T0033087.1 MGP_WSBEiJ_G0018827.1 mouse_genomes_project 11 122111492 122120955 + MGP_WSBEiJ_P0033087 Cbx2 protein_coding protein_coding MGP_WSBEiJ_T0033088.1 MGP_WSBEiJ_G0018827.1 mouse_genomes_project 11 122113409 122117723 + Cbx2 protein_coding processed_transcript MGP_WSBEiJ_T0026959.1 MGP_WSBEiJ_G0017327.1 mouse_genomes_project 11 228567 269291 - MGP_WSBEiJ_P0026959 Rnf185 protein_coding protein_coding MGP_WSBEiJ_T0026960.1 MGP_WSBEiJ_G0017327.1 mouse_genomes_project 11 228567 269291 - MGP_WSBEiJ_P0026960 Rnf185 protein_coding protein_coding MGP_WSBEiJ_T0026961.1 MGP_WSBEiJ_G0017327.1 mouse_genomes_project 11 230461 269262 - Rnf185 protein_coding processed_transcript MGP_WSBEiJ_T0012281.1 MGP_WSBEiJ_G0010411.1 mouse_genomes_project 11 26616730 26618894 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030423.1 MGP_WSBEiJ_G0018188.1 mouse_genomes_project 11 82983404 83044617 + MGP_WSBEiJ_P0030423 Tmem132e protein_coding protein_coding MGP_WSBEiJ_T0030424.1 MGP_WSBEiJ_G0018188.1 mouse_genomes_project 11 82983404 83044622 + MGP_WSBEiJ_P0030424 Tmem132e protein_coding protein_coding MGP_WSBEiJ_T0030425.1 MGP_WSBEiJ_G0018188.1 mouse_genomes_project 11 82983627 83033045 + Tmem132e protein_coding processed_transcript MGP_WSBEiJ_T0030426.1 MGP_WSBEiJ_G0018188.1 mouse_genomes_project 11 83036578 83041189 + Tmem132e protein_coding retained_intron MGP_WSBEiJ_T0028034.1 MGP_WSBEiJ_G0017595.1 mouse_genomes_project 11 47919346 47920282 + MGP_WSBEiJ_P0028034 Olfr1387 protein_coding protein_coding MGP_WSBEiJ_T0028695.1 MGP_WSBEiJ_G0017781.1 mouse_genomes_project 11 59778912 59798684 + Alkbh5 protein_coding processed_transcript MGP_WSBEiJ_T0028696.1 MGP_WSBEiJ_G0017781.1 mouse_genomes_project 11 59780509 59802870 + MGP_WSBEiJ_P0028696 Alkbh5 protein_coding protein_coding MGP_WSBEiJ_T0031541.1 MGP_WSBEiJ_G0018507.1 mouse_genomes_project 11 102232199 102238586 - MGP_WSBEiJ_P0031541 P3h4 protein_coding protein_coding MGP_WSBEiJ_T0031542.1 MGP_WSBEiJ_G0018507.1 mouse_genomes_project 11 102233109 102235624 - MGP_WSBEiJ_P0031542 P3h4 protein_coding protein_coding MGP_WSBEiJ_T0030052.1 MGP_WSBEiJ_G0018101.1 mouse_genomes_project 11 77181204 77182234 + Blmh protein_coding retained_intron MGP_WSBEiJ_T0030053.1 MGP_WSBEiJ_G0018101.1 mouse_genomes_project 11 77181214 77205069 + Blmh protein_coding retained_intron MGP_WSBEiJ_T0030054.1 MGP_WSBEiJ_G0018101.1 mouse_genomes_project 11 77181296 77204086 + MGP_WSBEiJ_P0030054 Blmh protein_coding protein_coding MGP_WSBEiJ_T0030055.1 MGP_WSBEiJ_G0018101.1 mouse_genomes_project 11 77181326 77223957 + MGP_WSBEiJ_P0030055 Blmh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030056.1 MGP_WSBEiJ_G0018101.1 mouse_genomes_project 11 77181356 77224512 + MGP_WSBEiJ_P0030056 Blmh protein_coding protein_coding MGP_WSBEiJ_T0030057.1 MGP_WSBEiJ_G0018101.1 mouse_genomes_project 11 77181522 77190059 + MGP_WSBEiJ_P0030057 Blmh protein_coding protein_coding MGP_WSBEiJ_T0030058.1 MGP_WSBEiJ_G0018101.1 mouse_genomes_project 11 77181543 77188009 + MGP_WSBEiJ_P0030058 Blmh protein_coding protein_coding MGP_WSBEiJ_T0030059.1 MGP_WSBEiJ_G0018101.1 mouse_genomes_project 11 77198490 77203123 + Blmh protein_coding processed_transcript MGP_WSBEiJ_T0097695.1 MGP_WSBEiJ_G0036358.1 mouse_genomes_project 11 53655659 53655829 + Gm23021 snRNA snRNA MGP_WSBEiJ_T0097679.1 MGP_WSBEiJ_G0036342.1 mouse_genomes_project 11 17463684 17463787 - Gm26253 snRNA snRNA MGP_WSBEiJ_T0032487.1 MGP_WSBEiJ_G0018709.1 mouse_genomes_project 11 116374702 116385029 + MGP_WSBEiJ_P0032487 D11Wsu47e protein_coding protein_coding MGP_WSBEiJ_T0032488.1 MGP_WSBEiJ_G0018709.1 mouse_genomes_project 11 116374730 116378507 + MGP_WSBEiJ_P0032488 D11Wsu47e protein_coding protein_coding MGP_WSBEiJ_T0032489.1 MGP_WSBEiJ_G0018709.1 mouse_genomes_project 11 116374737 116385029 + MGP_WSBEiJ_P0032489 D11Wsu47e protein_coding protein_coding MGP_WSBEiJ_T0032490.1 MGP_WSBEiJ_G0018709.1 mouse_genomes_project 11 116375376 116378422 + MGP_WSBEiJ_P0032490 D11Wsu47e protein_coding protein_coding MGP_WSBEiJ_T0012390.1 MGP_WSBEiJ_G0010520.1 mouse_genomes_project 11 70166989 70167633 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012393.1 MGP_WSBEiJ_G0010523.1 mouse_genomes_project 11 70602501 70602922 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028778.1 MGP_WSBEiJ_G0017801.1 mouse_genomes_project 11 60763486 60766866 + MGP_WSBEiJ_P0028778 Mfap4 protein_coding protein_coding MGP_WSBEiJ_T0028779.1 MGP_WSBEiJ_G0017801.1 mouse_genomes_project 11 60763516 60766041 + MGP_WSBEiJ_P0028779 Mfap4 protein_coding protein_coding MGP_WSBEiJ_T0028780.1 MGP_WSBEiJ_G0017801.1 mouse_genomes_project 11 60763546 60765008 + Mfap4 protein_coding processed_transcript MGP_WSBEiJ_T0028781.1 MGP_WSBEiJ_G0017801.1 mouse_genomes_project 11 60763571 60766866 + Mfap4 protein_coding processed_transcript MGP_WSBEiJ_T0027223.1 MGP_WSBEiJ_G0017386.1 mouse_genomes_project 11 3167798 3169415 + MGP_WSBEiJ_P0027223 A730071L15Rik protein_coding protein_coding MGP_WSBEiJ_T0009629.1 MGP_WSBEiJ_G0007786.1 mouse_genomes_project 11 124606712 124606772 - Mir7236 miRNA miRNA MGP_WSBEiJ_T0029665.1 MGP_WSBEiJ_G0017989.1 mouse_genomes_project 11 71990051 71999701 - MGP_WSBEiJ_P0029665 Aipl1 protein_coding protein_coding MGP_WSBEiJ_T0029666.1 MGP_WSBEiJ_G0017989.1 mouse_genomes_project 11 71990812 71999721 - MGP_WSBEiJ_P0029666 Aipl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033037.1 MGP_WSBEiJ_G0018817.1 mouse_genomes_project 11 121188522 121309202 - MGP_WSBEiJ_P0033037 Cyth1 protein_coding protein_coding MGP_WSBEiJ_T0033038.1 MGP_WSBEiJ_G0018817.1 mouse_genomes_project 11 121223099 121271390 - MGP_WSBEiJ_P0033038 Cyth1 protein_coding protein_coding MGP_WSBEiJ_T0033039.1 MGP_WSBEiJ_G0018817.1 mouse_genomes_project 11 121223099 121309292 - MGP_WSBEiJ_P0033039 Cyth1 protein_coding protein_coding MGP_WSBEiJ_T0033040.1 MGP_WSBEiJ_G0018817.1 mouse_genomes_project 11 121223108 121309260 - MGP_WSBEiJ_P0033040 Cyth1 protein_coding protein_coding MGP_WSBEiJ_T0033041.1 MGP_WSBEiJ_G0018817.1 mouse_genomes_project 11 121243903 121287586 - Cyth1 protein_coding processed_transcript MGP_WSBEiJ_T0033042.1 MGP_WSBEiJ_G0018817.1 mouse_genomes_project 11 121244358 121277654 - Cyth1 protein_coding processed_transcript MGP_WSBEiJ_T0033043.1 MGP_WSBEiJ_G0018817.1 mouse_genomes_project 11 121244377 121271390 - MGP_WSBEiJ_P0033043 Cyth1 protein_coding protein_coding MGP_WSBEiJ_T0027192.1 MGP_WSBEiJ_G0017380.1 mouse_genomes_project 11 2837394 2843498 - MGP_WSBEiJ_P0027192 Pold2 protein_coding protein_coding MGP_WSBEiJ_T0027193.1 MGP_WSBEiJ_G0017380.1 mouse_genomes_project 11 2837402 2838406 - Pold2 protein_coding retained_intron MGP_WSBEiJ_T0027194.1 MGP_WSBEiJ_G0017380.1 mouse_genomes_project 11 2839288 2842871 - MGP_WSBEiJ_P0027194 Pold2 protein_coding protein_coding MGP_WSBEiJ_T0027195.1 MGP_WSBEiJ_G0017380.1 mouse_genomes_project 11 2839325 2841973 - Pold2 protein_coding retained_intron MGP_WSBEiJ_T0027196.1 MGP_WSBEiJ_G0017380.1 mouse_genomes_project 11 2840378 2843418 - Pold2 protein_coding processed_transcript MGP_WSBEiJ_T0031044.1 MGP_WSBEiJ_G0018341.1 mouse_genomes_project 11 96760170 96847079 + MGP_WSBEiJ_P0031044 Spop protein_coding protein_coding MGP_WSBEiJ_T0031045.1 MGP_WSBEiJ_G0018341.1 mouse_genomes_project 11 96760200 96824666 + MGP_WSBEiJ_P0031045 Spop protein_coding protein_coding MGP_WSBEiJ_T0031046.1 MGP_WSBEiJ_G0018341.1 mouse_genomes_project 11 96760289 96824645 + MGP_WSBEiJ_P0031046 Spop protein_coding protein_coding MGP_WSBEiJ_T0031047.1 MGP_WSBEiJ_G0018341.1 mouse_genomes_project 11 96760289 96847079 + MGP_WSBEiJ_P0031047 Spop protein_coding protein_coding MGP_WSBEiJ_T0031048.1 MGP_WSBEiJ_G0018341.1 mouse_genomes_project 11 96824649 96843987 + Spop protein_coding processed_transcript MGP_WSBEiJ_T0012233.1 MGP_WSBEiJ_G0010363.1 mouse_genomes_project 11 11851269 11851866 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029757.1 MGP_WSBEiJ_G0018012.1 mouse_genomes_project 11 73050777 73095002 + MGP_WSBEiJ_P0029757 Ncbp3 protein_coding protein_coding MGP_WSBEiJ_T0029758.1 MGP_WSBEiJ_G0018012.1 mouse_genomes_project 11 73050864 73063112 + Ncbp3 protein_coding retained_intron MGP_WSBEiJ_T0029759.1 MGP_WSBEiJ_G0018012.1 mouse_genomes_project 11 73050867 73061190 + Ncbp3 protein_coding retained_intron MGP_WSBEiJ_T0097269.1 MGP_WSBEiJ_G0035949.1 mouse_genomes_project 11 88580876 88586074 + 1110028F11Rik sense_intronic sense_intronic MGP_WSBEiJ_T0097270.1 MGP_WSBEiJ_G0035949.1 mouse_genomes_project 11 88581603 88585732 + 1110028F11Rik sense_intronic sense_intronic MGP_WSBEiJ_T0033407.1 MGP_WSBEiJ_G0018888.1 mouse_genomes_project 11 124151433 124161700 + MGP_WSBEiJ_P0033407 Slc16a3 protein_coding protein_coding MGP_WSBEiJ_T0033408.1 MGP_WSBEiJ_G0018888.1 mouse_genomes_project 11 124152006 124159672 + MGP_WSBEiJ_P0033408 Slc16a3 protein_coding protein_coding MGP_WSBEiJ_T0033409.1 MGP_WSBEiJ_G0018888.1 mouse_genomes_project 11 124152020 124161925 + MGP_WSBEiJ_P0033409 Slc16a3 protein_coding protein_coding MGP_WSBEiJ_T0033410.1 MGP_WSBEiJ_G0018888.1 mouse_genomes_project 11 124152024 124159786 + MGP_WSBEiJ_P0033410 Slc16a3 protein_coding protein_coding MGP_WSBEiJ_T0033411.1 MGP_WSBEiJ_G0018888.1 mouse_genomes_project 11 124152034 124163783 + MGP_WSBEiJ_P0033411 Slc16a3 protein_coding protein_coding MGP_WSBEiJ_T0033412.1 MGP_WSBEiJ_G0018888.1 mouse_genomes_project 11 124153641 124158198 + MGP_WSBEiJ_P0033412 Slc16a3 protein_coding protein_coding MGP_WSBEiJ_T0033413.1 MGP_WSBEiJ_G0018888.1 mouse_genomes_project 11 124154091 124157137 + Slc16a3 protein_coding processed_transcript MGP_WSBEiJ_T0033414.1 MGP_WSBEiJ_G0018888.1 mouse_genomes_project 11 124158150 124159156 + Slc16a3 protein_coding retained_intron MGP_WSBEiJ_T0012417.1 MGP_WSBEiJ_G0010547.1 mouse_genomes_project 11 79867609 79868116 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030371.1 MGP_WSBEiJ_G0018171.1 mouse_genomes_project 11 80766624 80825488 + MGP_WSBEiJ_P0030371 Rhbdl3 protein_coding protein_coding MGP_WSBEiJ_T0030372.1 MGP_WSBEiJ_G0018171.1 mouse_genomes_project 11 80788554 80793025 + Rhbdl3 protein_coding retained_intron MGP_WSBEiJ_T0030373.1 MGP_WSBEiJ_G0018171.1 mouse_genomes_project 11 80815893 80823218 + Rhbdl3 protein_coding retained_intron MGP_WSBEiJ_T0027778.1 MGP_WSBEiJ_G0017519.1 mouse_genomes_project 11 32094721 32662324 - MGP_WSBEiJ_P0027778 Dock2 protein_coding protein_coding MGP_WSBEiJ_T0027779.1 MGP_WSBEiJ_G0017519.1 mouse_genomes_project 11 32098466 32099578 - Dock2 protein_coding retained_intron MGP_WSBEiJ_T0027780.1 MGP_WSBEiJ_G0017519.1 mouse_genomes_project 11 32141832 32662324 - MGP_WSBEiJ_P0027780 Dock2 protein_coding protein_coding MGP_WSBEiJ_T0027781.1 MGP_WSBEiJ_G0017519.1 mouse_genomes_project 11 32177845 32182831 - Dock2 protein_coding retained_intron MGP_WSBEiJ_T0027784.1 MGP_WSBEiJ_G0017519.1 mouse_genomes_project 11 32234137 32567805 - MGP_WSBEiJ_P0027784 Dock2 protein_coding protein_coding MGP_WSBEiJ_T0027785.1 MGP_WSBEiJ_G0017519.1 mouse_genomes_project 11 32310585 32662315 - Dock2 protein_coding retained_intron MGP_WSBEiJ_T0027786.1 MGP_WSBEiJ_G0017519.1 mouse_genomes_project 11 32310585 32662324 - MGP_WSBEiJ_P0027786 Dock2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030469.1 MGP_WSBEiJ_G0018198.1 mouse_genomes_project 11 83609334 83623231 - MGP_WSBEiJ_P0030469 Slfn9 protein_coding protein_coding MGP_WSBEiJ_T0012451.1 MGP_WSBEiJ_G0010581.1 mouse_genomes_project 11 97106256 97106564 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097694.1 MGP_WSBEiJ_G0036357.1 mouse_genomes_project 11 53270367 53270475 + Gm24198 snRNA snRNA MGP_WSBEiJ_T0029051.1 MGP_WSBEiJ_G0017862.1 mouse_genomes_project 11 68053429 68101554 + Pik3r5 protein_coding processed_transcript MGP_WSBEiJ_T0029052.1 MGP_WSBEiJ_G0017862.1 mouse_genomes_project 11 68053464 68061620 + Pik3r5 protein_coding processed_transcript MGP_WSBEiJ_T0029053.1 MGP_WSBEiJ_G0017862.1 mouse_genomes_project 11 68073123 68122741 + MGP_WSBEiJ_P0029053 Pik3r5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029054.1 MGP_WSBEiJ_G0017862.1 mouse_genomes_project 11 68098579 68121117 + Pik3r5 protein_coding processed_transcript MGP_WSBEiJ_T0029055.1 MGP_WSBEiJ_G0017862.1 mouse_genomes_project 11 68100270 68118201 + Pik3r5 protein_coding processed_transcript MGP_WSBEiJ_T0030993.1 MGP_WSBEiJ_G0018328.1 mouse_genomes_project 11 96252617 96271741 + MGP_WSBEiJ_P0030993 Col1a1 protein_coding protein_coding MGP_WSBEiJ_T0030994.1 MGP_WSBEiJ_G0018328.1 mouse_genomes_project 11 96254074 96254492 + Col1a1 protein_coding processed_transcript MGP_WSBEiJ_T0030995.1 MGP_WSBEiJ_G0018328.1 mouse_genomes_project 11 96255400 96256130 + Col1a1 protein_coding retained_intron MGP_WSBEiJ_T0030996.1 MGP_WSBEiJ_G0018328.1 mouse_genomes_project 11 96262377 96263039 + Col1a1 protein_coding retained_intron MGP_WSBEiJ_T0003266.1 MGP_WSBEiJ_G0003018.1 mouse_genomes_project 11 118225583 118227491 - Ict1os antisense antisense MGP_WSBEiJ_T0033001.1 MGP_WSBEiJ_G0018807.1 mouse_genomes_project 11 120849213 120880640 + MGP_WSBEiJ_P0033001 Gm20708 protein_coding protein_coding MGP_WSBEiJ_T0100468.1 MGP_WSBEiJ_G0038927.1 mouse_genomes_project 11 49549091 49550005 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0031196.1 MGP_WSBEiJ_G0018384.1 mouse_genomes_project 11 98636277 98637979 - Kpnb1 protein_coding retained_intron MGP_WSBEiJ_T0031197.1 MGP_WSBEiJ_G0018384.1 mouse_genomes_project 11 98636410 98661300 - MGP_WSBEiJ_P0031197 Kpnb1 protein_coding protein_coding MGP_WSBEiJ_T0031198.1 MGP_WSBEiJ_G0018384.1 mouse_genomes_project 11 98637977 98639157 - Kpnb1 protein_coding retained_intron MGP_WSBEiJ_T0006291.1 MGP_WSBEiJ_G0005244.1 mouse_genomes_project 11 124299233 124299800 - Gm11791 lincRNA lincRNA MGP_WSBEiJ_T0012514.1 MGP_WSBEiJ_G0010644.1 mouse_genomes_project 11 124377213 124377676 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028491.1 MGP_WSBEiJ_G0017714.1 mouse_genomes_project 11 57331045 57348211 + MGP_WSBEiJ_P0028491 Sh3bp5l protein_coding protein_coding MGP_WSBEiJ_T0028492.1 MGP_WSBEiJ_G0017714.1 mouse_genomes_project 11 57331071 57348208 + MGP_WSBEiJ_P0028492 Sh3bp5l protein_coding protein_coding MGP_WSBEiJ_T0028493.1 MGP_WSBEiJ_G0017714.1 mouse_genomes_project 11 57331364 57331831 + Sh3bp5l protein_coding processed_transcript MGP_WSBEiJ_T0028494.1 MGP_WSBEiJ_G0017714.1 mouse_genomes_project 11 57331596 57348203 + Sh3bp5l protein_coding processed_transcript MGP_WSBEiJ_T0028495.1 MGP_WSBEiJ_G0017714.1 mouse_genomes_project 11 57345793 57347433 + Sh3bp5l protein_coding processed_transcript MGP_WSBEiJ_T0032087.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105409754 105441579 - MGP_WSBEiJ_P0032087 Arhgap27 protein_coding protein_coding MGP_WSBEiJ_T0032088.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105409755 105445323 - Arhgap27 protein_coding retained_intron MGP_WSBEiJ_T0032089.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105409757 105424359 - MGP_WSBEiJ_P0032089 Arhgap27 protein_coding protein_coding MGP_WSBEiJ_T0032090.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105411423 105412364 - Arhgap27 protein_coding retained_intron MGP_WSBEiJ_T0032091.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105411486 105411653 - Arhgap27 protein_coding processed_transcript MGP_WSBEiJ_T0032092.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105411722 105412343 - Arhgap27 protein_coding retained_intron MGP_WSBEiJ_T0032093.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105413521 105419382 - Arhgap27 protein_coding retained_intron MGP_WSBEiJ_T0032094.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105417453 105418966 - Arhgap27 protein_coding retained_intron MGP_WSBEiJ_T0032095.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105418891 105437038 - MGP_WSBEiJ_P0032095 Arhgap27 protein_coding protein_coding MGP_WSBEiJ_T0032096.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105419797 105437052 - MGP_WSBEiJ_P0032096 Arhgap27 protein_coding protein_coding MGP_WSBEiJ_T0032097.1 MGP_WSBEiJ_G0018616.1 mouse_genomes_project 11 105440417 105445095 - MGP_WSBEiJ_P0032097 Arhgap27 protein_coding protein_coding MGP_WSBEiJ_T0033180.1 MGP_WSBEiJ_G0018844.1 mouse_genomes_project 11 123224008 123249294 - MGP_WSBEiJ_P0033180 Cep131 protein_coding protein_coding MGP_WSBEiJ_T0033181.1 MGP_WSBEiJ_G0018844.1 mouse_genomes_project 11 123224012 123224547 - Cep131 protein_coding processed_transcript MGP_WSBEiJ_T0033182.1 MGP_WSBEiJ_G0018844.1 mouse_genomes_project 11 123224217 123227648 - Cep131 protein_coding processed_transcript MGP_WSBEiJ_T0033183.1 MGP_WSBEiJ_G0018844.1 mouse_genomes_project 11 123226723 123230514 - Cep131 protein_coding processed_transcript MGP_WSBEiJ_T0033184.1 MGP_WSBEiJ_G0018844.1 mouse_genomes_project 11 123227679 123231629 - Cep131 protein_coding processed_transcript MGP_WSBEiJ_T0032248.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108472383 108477006 - MGP_WSBEiJ_P0032248 Smarcd2 protein_coding protein_coding MGP_WSBEiJ_T0032249.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108472383 108482559 - MGP_WSBEiJ_P0032249 Smarcd2 protein_coding protein_coding MGP_WSBEiJ_T0032250.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108472918 108474867 - Smarcd2 protein_coding retained_intron MGP_WSBEiJ_T0032251.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108473003 108474141 - Smarcd2 protein_coding retained_intron MGP_WSBEiJ_T0032252.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108473223 108474951 - MGP_WSBEiJ_P0032252 Smarcd2 protein_coding protein_coding MGP_WSBEiJ_T0032253.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108473937 108475276 - Smarcd2 protein_coding retained_intron MGP_WSBEiJ_T0032254.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108474516 108482552 - Smarcd2 protein_coding processed_transcript MGP_WSBEiJ_T0032255.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108474943 108476688 - Smarcd2 protein_coding processed_transcript MGP_WSBEiJ_T0032256.1 MGP_WSBEiJ_G0018656.1 mouse_genomes_project 11 108476095 108476733 - Smarcd2 protein_coding retained_intron MGP_WSBEiJ_T0030645.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87027457 87077279 - MGP_WSBEiJ_P0030645 Ints2 protein_coding protein_coding MGP_WSBEiJ_T0030646.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87028864 87076276 - MGP_WSBEiJ_P0030646 Ints2 protein_coding protein_coding MGP_WSBEiJ_T0030647.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87034579 87045770 - MGP_WSBEiJ_P0030647 Ints2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030648.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87041458 87048708 - Ints2 protein_coding retained_intron MGP_WSBEiJ_T0030649.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87052088 87077270 - Ints2 protein_coding retained_intron MGP_WSBEiJ_T0030650.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87053028 87056291 - Ints2 protein_coding retained_intron MGP_WSBEiJ_T0030651.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87069473 87077304 - MGP_WSBEiJ_P0030651 Ints2 protein_coding protein_coding MGP_WSBEiJ_T0030652.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87075080 87077283 - MGP_WSBEiJ_P0030652 Ints2 protein_coding protein_coding MGP_WSBEiJ_T0030653.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87075755 87077247 - MGP_WSBEiJ_P0030653 Ints2 protein_coding protein_coding MGP_WSBEiJ_T0030654.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87076082 87077070 - Ints2 protein_coding retained_intron MGP_WSBEiJ_T0030655.1 MGP_WSBEiJ_G0018247.1 mouse_genomes_project 11 87076172 87077294 - Ints2 protein_coding processed_transcript MGP_WSBEiJ_T0027327.1 MGP_WSBEiJ_G0017413.1 mouse_genomes_project 11 8396574 8572157 - MGP_WSBEiJ_P0027327 Zpbp protein_coding protein_coding MGP_WSBEiJ_T0027880.1 MGP_WSBEiJ_G0017546.1 mouse_genomes_project 11 41936837 42000128 - MGP_WSBEiJ_P0027880 Adra1b protein_coding protein_coding MGP_WSBEiJ_T0027881.1 MGP_WSBEiJ_G0017546.1 mouse_genomes_project 11 41936837 42065096 - MGP_WSBEiJ_P0027881 Adra1b protein_coding protein_coding MGP_WSBEiJ_T0027882.1 MGP_WSBEiJ_G0017546.1 mouse_genomes_project 11 41938248 42065096 - MGP_WSBEiJ_P0027882 Adra1b protein_coding protein_coding MGP_WSBEiJ_T0030201.1 MGP_WSBEiJ_G0018128.1 mouse_genomes_project 11 78509003 78512401 + MGP_WSBEiJ_P0030201 Rab34 protein_coding protein_coding MGP_WSBEiJ_T0030202.1 MGP_WSBEiJ_G0018128.1 mouse_genomes_project 11 78509442 78512748 + MGP_WSBEiJ_P0030202 Rab34 protein_coding protein_coding MGP_WSBEiJ_T0030203.1 MGP_WSBEiJ_G0018128.1 mouse_genomes_project 11 78509803 78510870 + Rab34 protein_coding retained_intron MGP_WSBEiJ_T0030204.1 MGP_WSBEiJ_G0018128.1 mouse_genomes_project 11 78509900 78512759 + MGP_WSBEiJ_P0030204 Rab34 protein_coding protein_coding MGP_WSBEiJ_T0030205.1 MGP_WSBEiJ_G0018128.1 mouse_genomes_project 11 78510151 78511677 + Rab34 protein_coding retained_intron MGP_WSBEiJ_T0030206.1 MGP_WSBEiJ_G0018128.1 mouse_genomes_project 11 78510916 78511497 + Rab34 protein_coding retained_intron MGP_WSBEiJ_T0006125.1 MGP_WSBEiJ_G0005115.1 mouse_genomes_project 11 32008153 32009748 + Gm12121 lincRNA lincRNA MGP_WSBEiJ_T0033376.1 MGP_WSBEiJ_G0018881.1 mouse_genomes_project 11 123926344 123929357 - MGP_WSBEiJ_P0033376 Cbr2 protein_coding protein_coding MGP_WSBEiJ_T0033377.1 MGP_WSBEiJ_G0018881.1 mouse_genomes_project 11 123926344 123929215 - MGP_WSBEiJ_P0033377 Cbr2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033378.1 MGP_WSBEiJ_G0018881.1 mouse_genomes_project 11 123926359 123927348 - Cbr2 protein_coding retained_intron MGP_WSBEiJ_T0033379.1 MGP_WSBEiJ_G0018881.1 mouse_genomes_project 11 123926634 123929187 - MGP_WSBEiJ_P0033379 Cbr2 protein_coding protein_coding MGP_WSBEiJ_T0033380.1 MGP_WSBEiJ_G0018881.1 mouse_genomes_project 11 123927355 123929195 - Cbr2 protein_coding retained_intron MGP_WSBEiJ_T0032150.1 MGP_WSBEiJ_G0018631.1 mouse_genomes_project 11 106690053 106730939 + MGP_WSBEiJ_P0032150 Myl4 protein_coding protein_coding MGP_WSBEiJ_T0032152.1 MGP_WSBEiJ_G0018631.1 mouse_genomes_project 11 106719224 106729472 + MGP_WSBEiJ_P0032152 Myl4 protein_coding protein_coding MGP_WSBEiJ_T0032153.1 MGP_WSBEiJ_G0018631.1 mouse_genomes_project 11 106720678 106730939 + MGP_WSBEiJ_P0032153 Myl4 protein_coding protein_coding MGP_WSBEiJ_T0032154.1 MGP_WSBEiJ_G0018631.1 mouse_genomes_project 11 106720710 106728738 + MGP_WSBEiJ_P0032154 Myl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032155.1 MGP_WSBEiJ_G0018631.1 mouse_genomes_project 11 106721003 106730939 + MGP_WSBEiJ_P0032155 Myl4 protein_coding protein_coding MGP_WSBEiJ_T0032156.1 MGP_WSBEiJ_G0018631.1 mouse_genomes_project 11 106724048 106730933 + Myl4 protein_coding retained_intron MGP_WSBEiJ_T0032157.1 MGP_WSBEiJ_G0018631.1 mouse_genomes_project 11 106725762 106730071 + Myl4 protein_coding retained_intron MGP_WSBEiJ_T0032158.1 MGP_WSBEiJ_G0018631.1 mouse_genomes_project 11 106728687 106739422 + MGP_WSBEiJ_P0032158 Myl4 protein_coding protein_coding MGP_WSBEiJ_T0032525.1 MGP_WSBEiJ_G0018717.1 mouse_genomes_project 11 117562156 117566825 - Btbd17 protein_coding processed_transcript MGP_WSBEiJ_T0032526.1 MGP_WSBEiJ_G0018717.1 mouse_genomes_project 11 117562156 117566862 - Btbd17 protein_coding processed_transcript MGP_WSBEiJ_T0032527.1 MGP_WSBEiJ_G0018717.1 mouse_genomes_project 11 117562156 117566849 - MGP_WSBEiJ_P0032527 Btbd17 protein_coding protein_coding MGP_WSBEiJ_T0032528.1 MGP_WSBEiJ_G0018717.1 mouse_genomes_project 11 117563045 117566897 - Btbd17 protein_coding processed_transcript MGP_WSBEiJ_T0032529.1 MGP_WSBEiJ_G0018717.1 mouse_genomes_project 11 117563224 117566851 - Btbd17 protein_coding processed_transcript MGP_WSBEiJ_T0032530.1 MGP_WSBEiJ_G0018717.1 mouse_genomes_project 11 117563371 117566825 - Btbd17 protein_coding processed_transcript MGP_WSBEiJ_T0032531.1 MGP_WSBEiJ_G0018717.1 mouse_genomes_project 11 117563408 117566844 - Btbd17 protein_coding processed_transcript MGP_WSBEiJ_T0012472.1 MGP_WSBEiJ_G0010602.1 mouse_genomes_project 11 104771748 104774387 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006269.1 MGP_WSBEiJ_G0005226.1 mouse_genomes_project 11 117152895 117190606 - 4932435O22Rik lincRNA lincRNA MGP_WSBEiJ_T0006270.1 MGP_WSBEiJ_G0005226.1 mouse_genomes_project 11 117153133 117164406 - 4932435O22Rik lincRNA lincRNA MGP_WSBEiJ_T0009596.1 MGP_WSBEiJ_G0007753.1 mouse_genomes_project 11 99832044 99832101 + Mir5119 miRNA miRNA MGP_WSBEiJ_T0031340.1 MGP_WSBEiJ_G0018417.1 mouse_genomes_project 11 99970836 99976861 - Pgap3 protein_coding processed_transcript MGP_WSBEiJ_T0031341.1 MGP_WSBEiJ_G0018417.1 mouse_genomes_project 11 99970836 99987413 - MGP_WSBEiJ_P0031341 Pgap3 protein_coding protein_coding MGP_WSBEiJ_T0031342.1 MGP_WSBEiJ_G0018417.1 mouse_genomes_project 11 99971783 99987358 - MGP_WSBEiJ_P0031342 Pgap3 protein_coding protein_coding MGP_WSBEiJ_T0031343.1 MGP_WSBEiJ_G0018417.1 mouse_genomes_project 11 99976110 99987337 - Pgap3 protein_coding processed_transcript MGP_WSBEiJ_T0031344.1 MGP_WSBEiJ_G0018417.1 mouse_genomes_project 11 99985487 99987360 - Pgap3 protein_coding processed_transcript MGP_WSBEiJ_T0032339.1 MGP_WSBEiJ_G0018674.1 mouse_genomes_project 11 109496733 109784397 - MGP_WSBEiJ_P0032339 Pitpnc1 protein_coding protein_coding MGP_WSBEiJ_T0032340.1 MGP_WSBEiJ_G0018674.1 mouse_genomes_project 11 109496733 109633304 - MGP_WSBEiJ_P0032340 Pitpnc1 protein_coding protein_coding MGP_WSBEiJ_T0032341.1 MGP_WSBEiJ_G0018674.1 mouse_genomes_project 11 109516407 109645213 - MGP_WSBEiJ_P0032341 Pitpnc1 protein_coding protein_coding MGP_WSBEiJ_T0032342.1 MGP_WSBEiJ_G0018674.1 mouse_genomes_project 11 109616287 109633193 - Pitpnc1 protein_coding processed_transcript MGP_WSBEiJ_T0028749.1 MGP_WSBEiJ_G0017795.1 mouse_genomes_project 11 60424074 60447373 - MGP_WSBEiJ_P0028749 Usp22 protein_coding protein_coding MGP_WSBEiJ_T0028750.1 MGP_WSBEiJ_G0017795.1 mouse_genomes_project 11 60426312 60429686 - Usp22 protein_coding retained_intron MGP_WSBEiJ_T0028751.1 MGP_WSBEiJ_G0017795.1 mouse_genomes_project 11 60428003 60431682 - Usp22 protein_coding retained_intron MGP_WSBEiJ_T0028752.1 MGP_WSBEiJ_G0017795.1 mouse_genomes_project 11 60433694 60440591 - MGP_WSBEiJ_P0028752 Usp22 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028753.1 MGP_WSBEiJ_G0017795.1 mouse_genomes_project 11 60435071 60447347 - Usp22 protein_coding retained_intron MGP_WSBEiJ_T0031134.1 MGP_WSBEiJ_G0018370.1 mouse_genomes_project 11 98233339 98251105 + MGP_WSBEiJ_P0031134 Cbx1 protein_coding protein_coding MGP_WSBEiJ_T0031135.1 MGP_WSBEiJ_G0018370.1 mouse_genomes_project 11 98233349 98255720 + MGP_WSBEiJ_P0031135 Cbx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031136.1 MGP_WSBEiJ_G0018370.1 mouse_genomes_project 11 98233371 98256212 + MGP_WSBEiJ_P0031136 Cbx1 protein_coding protein_coding MGP_WSBEiJ_T0031137.1 MGP_WSBEiJ_G0018370.1 mouse_genomes_project 11 98233387 98248529 + Cbx1 protein_coding retained_intron MGP_WSBEiJ_T0031138.1 MGP_WSBEiJ_G0018370.1 mouse_genomes_project 11 98233461 98256112 + MGP_WSBEiJ_P0031138 Cbx1 protein_coding protein_coding MGP_WSBEiJ_T0012253.1 MGP_WSBEiJ_G0010383.1 mouse_genomes_project 11 17564517 17564838 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028742.1 MGP_WSBEiJ_G0017794.1 mouse_genomes_project 11 60395973 60421618 + MGP_WSBEiJ_P0028742 Tnfrsf13b protein_coding protein_coding MGP_WSBEiJ_T0028743.1 MGP_WSBEiJ_G0017794.1 mouse_genomes_project 11 60395976 60419109 + MGP_WSBEiJ_P0028743 Tnfrsf13b protein_coding protein_coding MGP_WSBEiJ_T0028744.1 MGP_WSBEiJ_G0017794.1 mouse_genomes_project 11 60396007 60419152 + MGP_WSBEiJ_P0028744 Tnfrsf13b protein_coding protein_coding MGP_WSBEiJ_T0028745.1 MGP_WSBEiJ_G0017794.1 mouse_genomes_project 11 60413003 60419880 + MGP_WSBEiJ_P0028745 Tnfrsf13b protein_coding protein_coding MGP_WSBEiJ_T0028746.1 MGP_WSBEiJ_G0017794.1 mouse_genomes_project 11 60414669 60420171 + Tnfrsf13b protein_coding processed_transcript MGP_WSBEiJ_T0028747.1 MGP_WSBEiJ_G0017794.1 mouse_genomes_project 11 60414707 60420044 + Tnfrsf13b protein_coding processed_transcript MGP_WSBEiJ_T0028748.1 MGP_WSBEiJ_G0017794.1 mouse_genomes_project 11 60414873 60419997 + Tnfrsf13b protein_coding processed_transcript MGP_WSBEiJ_T0006133.1 MGP_WSBEiJ_G0005123.1 mouse_genomes_project 11 42131346 42310197 + Gm12153 lincRNA lincRNA MGP_WSBEiJ_T0030619.1 MGP_WSBEiJ_G0018240.1 mouse_genomes_project 11 85943139 85993706 - MGP_WSBEiJ_P0030619 Appbp2 protein_coding protein_coding MGP_WSBEiJ_T0012509.1 MGP_WSBEiJ_G0010639.1 mouse_genomes_project 11 121263367 121263834 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097721.1 MGP_WSBEiJ_G0036384.1 mouse_genomes_project 11 88162708 88162814 - Gm22883 snRNA snRNA MGP_WSBEiJ_T0003067.1 MGP_WSBEiJ_G0002854.1 mouse_genomes_project 11 31527620 31529635 + Gm12119 antisense antisense MGP_WSBEiJ_T0029893.1 MGP_WSBEiJ_G0018066.1 mouse_genomes_project 11 75309754 75324563 - MGP_WSBEiJ_P0029893 Dph1 protein_coding protein_coding MGP_WSBEiJ_T0029894.1 MGP_WSBEiJ_G0018066.1 mouse_genomes_project 11 75309807 75315414 - Dph1 protein_coding retained_intron MGP_WSBEiJ_T0029896.1 MGP_WSBEiJ_G0018066.1 mouse_genomes_project 11 75310407 75313415 - Dph1 protein_coding processed_transcript MGP_WSBEiJ_T0029897.1 MGP_WSBEiJ_G0018066.1 mouse_genomes_project 11 75311300 75315606 - Dph1 protein_coding processed_transcript MGP_WSBEiJ_T0029898.1 MGP_WSBEiJ_G0018066.1 mouse_genomes_project 11 75312927 75325285 - MGP_WSBEiJ_P0029898 Dph1 protein_coding protein_coding MGP_WSBEiJ_T0098928.1 MGP_WSBEiJ_G0037591.1 mouse_genomes_project 11 68754583 68754718 + Snord118 snoRNA snoRNA MGP_WSBEiJ_T0028243.1 MGP_WSBEiJ_G0017647.1 mouse_genomes_project 11 51016309 51050116 + MGP_WSBEiJ_P0028243 Vdac1 protein_coding protein_coding MGP_WSBEiJ_T0028244.1 MGP_WSBEiJ_G0017647.1 mouse_genomes_project 11 51016584 51049215 + MGP_WSBEiJ_P0028244 Vdac1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028245.1 MGP_WSBEiJ_G0017647.1 mouse_genomes_project 11 51035069 51037588 + Vdac1 protein_coding processed_transcript MGP_WSBEiJ_T0028246.1 MGP_WSBEiJ_G0017647.1 mouse_genomes_project 11 51035232 51049242 + MGP_WSBEiJ_P0028246 Vdac1 protein_coding protein_coding MGP_WSBEiJ_T0028247.1 MGP_WSBEiJ_G0017647.1 mouse_genomes_project 11 51047906 51049510 + Vdac1 protein_coding retained_intron MGP_WSBEiJ_T0030554.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84832002 84923671 + MGP_WSBEiJ_P0030554 Acaca protein_coding protein_coding MGP_WSBEiJ_T0030555.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84832030 84835438 + Acaca protein_coding processed_transcript MGP_WSBEiJ_T0030557.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84879497 85116441 + MGP_WSBEiJ_P0030557 Acaca protein_coding protein_coding MGP_WSBEiJ_T0030558.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84879729 84945379 + Acaca protein_coding retained_intron MGP_WSBEiJ_T0030559.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84887259 84940935 + MGP_WSBEiJ_P0030559 Acaca protein_coding protein_coding MGP_WSBEiJ_T0030560.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84887259 84923576 + MGP_WSBEiJ_P0030560 Acaca protein_coding protein_coding MGP_WSBEiJ_T0030561.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84887286 84923565 + MGP_WSBEiJ_P0030561 Acaca protein_coding protein_coding MGP_WSBEiJ_T0030562.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84903619 85116435 + MGP_WSBEiJ_P0030562 Acaca protein_coding protein_coding MGP_WSBEiJ_T0030563.1 MGP_WSBEiJ_G0018227.1 mouse_genomes_project 11 84991570 85023706 + MGP_WSBEiJ_P0030563 Acaca protein_coding protein_coding MGP_WSBEiJ_T0033025.1 MGP_WSBEiJ_G0018814.1 mouse_genomes_project 11 121010046 121013156 - MGP_WSBEiJ_P0033025 Socs3 protein_coding protein_coding MGP_WSBEiJ_T0033026.1 MGP_WSBEiJ_G0018814.1 mouse_genomes_project 11 121012846 121014016 - Socs3 protein_coding processed_transcript MGP_WSBEiJ_T0033027.1 MGP_WSBEiJ_G0018814.1 mouse_genomes_project 11 121012905 121013421 - Socs3 protein_coding processed_transcript MGP_WSBEiJ_T0012250.1 MGP_WSBEiJ_G0010380.1 mouse_genomes_project 11 16977304 16977934 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027050.1 MGP_WSBEiJ_G0017348.1 mouse_genomes_project 11 1057455 1085574 + Tbc1d10a protein_coding processed_transcript MGP_WSBEiJ_T0027051.1 MGP_WSBEiJ_G0017348.1 mouse_genomes_project 11 1057455 1086194 + MGP_WSBEiJ_P0027051 Tbc1d10a protein_coding protein_coding MGP_WSBEiJ_T0027052.1 MGP_WSBEiJ_G0017348.1 mouse_genomes_project 11 1057488 1086191 + MGP_WSBEiJ_P0027052 Tbc1d10a protein_coding protein_coding MGP_WSBEiJ_T0027053.1 MGP_WSBEiJ_G0017348.1 mouse_genomes_project 11 1076100 1080678 + Tbc1d10a protein_coding processed_transcript MGP_WSBEiJ_T0027054.1 MGP_WSBEiJ_G0017348.1 mouse_genomes_project 11 1082998 1084288 + Tbc1d10a protein_coding processed_transcript MGP_WSBEiJ_T0027055.1 MGP_WSBEiJ_G0017348.1 mouse_genomes_project 11 1083162 1084544 + Tbc1d10a protein_coding processed_transcript MGP_WSBEiJ_T0032414.1 MGP_WSBEiJ_G0018691.1 mouse_genomes_project 11 111879834 111896440 + Arsg protein_coding processed_transcript MGP_WSBEiJ_T0032415.1 MGP_WSBEiJ_G0018691.1 mouse_genomes_project 11 111879834 111982666 + MGP_WSBEiJ_P0032415 Arsg protein_coding protein_coding MGP_WSBEiJ_T0032416.1 MGP_WSBEiJ_G0018691.1 mouse_genomes_project 11 111891467 111896338 + Arsg protein_coding processed_transcript MGP_WSBEiJ_T0032417.1 MGP_WSBEiJ_G0018691.1 mouse_genomes_project 11 111892050 111982671 + MGP_WSBEiJ_P0032417 Arsg protein_coding protein_coding MGP_WSBEiJ_T0032418.1 MGP_WSBEiJ_G0018691.1 mouse_genomes_project 11 111951170 111982671 + MGP_WSBEiJ_P0032418 Arsg protein_coding protein_coding MGP_WSBEiJ_T0027999.1 MGP_WSBEiJ_G0017587.1 mouse_genomes_project 11 47596141 47597080 + MGP_WSBEiJ_P0027999 Olfr1394 protein_coding protein_coding MGP_WSBEiJ_T0031835.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103970037 103997023 - Mpp3 protein_coding processed_transcript MGP_WSBEiJ_T0031836.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103970037 103996183 - MGP_WSBEiJ_P0031836 Mpp3 protein_coding protein_coding MGP_WSBEiJ_T0031837.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103970037 103998563 - MGP_WSBEiJ_P0031837 Mpp3 protein_coding protein_coding MGP_WSBEiJ_T0031838.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103970037 103997044 - MGP_WSBEiJ_P0031838 Mpp3 protein_coding protein_coding MGP_WSBEiJ_T0031839.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103978869 103980651 - Mpp3 protein_coding retained_intron MGP_WSBEiJ_T0031840.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103987479 103997026 - MGP_WSBEiJ_P0031840 Mpp3 protein_coding protein_coding MGP_WSBEiJ_T0031841.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103991212 103997023 - Mpp3 protein_coding processed_transcript MGP_WSBEiJ_T0031842.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103993524 103995946 - Mpp3 protein_coding processed_transcript MGP_WSBEiJ_T0031843.1 MGP_WSBEiJ_G0018571.1 mouse_genomes_project 11 103995475 103996844 - Mpp3 protein_coding processed_transcript MGP_WSBEiJ_T0029842.1 MGP_WSBEiJ_G0018055.1 mouse_genomes_project 11 74730015 74753977 + MGP_WSBEiJ_P0029842 Ccdc92b protein_coding unknown_likely_coding MGP_WSBEiJ_T0031499.1 MGP_WSBEiJ_G0018486.1 mouse_genomes_project 11 101764314 101765343 - MGP_WSBEiJ_P0031499 Krtap29-1 protein_coding protein_coding MGP_WSBEiJ_T0011121.1 MGP_WSBEiJ_G0009278.1 mouse_genomes_project 11 110165375 110165662 + Gm23120 misc_RNA misc_RNA MGP_WSBEiJ_T0012389.1 MGP_WSBEiJ_G0010519.1 mouse_genomes_project 11 69924260 69924634 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096920.1 MGP_WSBEiJ_G0035601.1 mouse_genomes_project 11 99842487 99842594 - n-R5s73 rRNA rRNA MGP_WSBEiJ_T0100464.1 MGP_WSBEiJ_G0038923.1 mouse_genomes_project 11 44823147 44823447 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0028885.1 MGP_WSBEiJ_G0017816.1 mouse_genomes_project 11 61795853 61869244 + MGP_WSBEiJ_P0028885 Pigl protein_coding protein_coding MGP_WSBEiJ_T0028886.1 MGP_WSBEiJ_G0017816.1 mouse_genomes_project 11 61796046 61867155 + Pigl protein_coding processed_transcript MGP_WSBEiJ_T0028456.1 MGP_WSBEiJ_G0017704.1 mouse_genomes_project 11 56792542 56796649 - MGP_WSBEiJ_P0028456 Hand1 protein_coding protein_coding MGP_WSBEiJ_T0028457.1 MGP_WSBEiJ_G0017704.1 mouse_genomes_project 11 56792544 56795990 - MGP_WSBEiJ_P0028457 Hand1 protein_coding protein_coding MGP_WSBEiJ_T0028458.1 MGP_WSBEiJ_G0017704.1 mouse_genomes_project 11 56795536 56796649 - MGP_WSBEiJ_P0028458 Hand1 protein_coding protein_coding MGP_WSBEiJ_T0009616.1 MGP_WSBEiJ_G0007773.1 mouse_genomes_project 11 118655338 118655401 + Mir5621 miRNA miRNA MGP_WSBEiJ_T0033389.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123981009 123988212 - MGP_WSBEiJ_P0033389 Dus1l protein_coding protein_coding MGP_WSBEiJ_T0033390.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123981010 123982256 - Dus1l protein_coding retained_intron MGP_WSBEiJ_T0033391.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123981010 123988204 - MGP_WSBEiJ_P0033391 Dus1l protein_coding protein_coding MGP_WSBEiJ_T0033392.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123981010 123988204 - MGP_WSBEiJ_P0033392 Dus1l protein_coding protein_coding MGP_WSBEiJ_T0033393.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123981012 123981659 - Dus1l protein_coding retained_intron MGP_WSBEiJ_T0033394.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123981014 123988198 - Dus1l protein_coding retained_intron MGP_WSBEiJ_T0033395.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123981014 123988207 - MGP_WSBEiJ_P0033395 Dus1l protein_coding protein_coding MGP_WSBEiJ_T0033396.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123984582 123988186 - MGP_WSBEiJ_P0033396 Dus1l protein_coding protein_coding MGP_WSBEiJ_T0033397.1 MGP_WSBEiJ_G0018885.1 mouse_genomes_project 11 123985653 123988202 - MGP_WSBEiJ_P0033397 Dus1l protein_coding protein_coding MGP_WSBEiJ_T0012402.1 MGP_WSBEiJ_G0010532.1 mouse_genomes_project 11 74415181 74416103 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028938.1 MGP_WSBEiJ_G0017830.1 mouse_genomes_project 11 62530286 62560814 + MGP_WSBEiJ_P0028938 Pmp22 protein_coding protein_coding MGP_WSBEiJ_T0028939.1 MGP_WSBEiJ_G0017830.1 mouse_genomes_project 11 62532816 62560815 + MGP_WSBEiJ_P0028939 Pmp22 protein_coding protein_coding MGP_WSBEiJ_T0028940.1 MGP_WSBEiJ_G0017830.1 mouse_genomes_project 11 62533873 62559753 + MGP_WSBEiJ_P0028940 Pmp22 protein_coding protein_coding MGP_WSBEiJ_T0028941.1 MGP_WSBEiJ_G0017830.1 mouse_genomes_project 11 62534107 62535794 + Pmp22 protein_coding processed_transcript MGP_WSBEiJ_T0028942.1 MGP_WSBEiJ_G0017830.1 mouse_genomes_project 11 62534372 62559835 + MGP_WSBEiJ_P0028942 Pmp22 protein_coding protein_coding MGP_WSBEiJ_T0028199.1 MGP_WSBEiJ_G0017637.1 mouse_genomes_project 11 50304698 50308193 - MGP_WSBEiJ_P0028199 0610009B22Rik protein_coding protein_coding MGP_WSBEiJ_T0028200.1 MGP_WSBEiJ_G0017637.1 mouse_genomes_project 11 50304698 50307972 - MGP_WSBEiJ_P0028200 0610009B22Rik protein_coding protein_coding MGP_WSBEiJ_T0027581.1 MGP_WSBEiJ_G0017470.1 mouse_genomes_project 11 26023110 26232513 - MGP_WSBEiJ_P0027581 Ccdc85a protein_coding protein_coding MGP_WSBEiJ_T0027582.1 MGP_WSBEiJ_G0017470.1 mouse_genomes_project 11 26023117 26232513 - MGP_WSBEiJ_P0027582 Ccdc85a protein_coding protein_coding MGP_WSBEiJ_T0027583.1 MGP_WSBEiJ_G0017470.1 mouse_genomes_project 11 26023117 26232541 - MGP_WSBEiJ_P0027583 Ccdc85a protein_coding protein_coding MGP_WSBEiJ_T0027584.1 MGP_WSBEiJ_G0017470.1 mouse_genomes_project 11 26024577 26232212 - MGP_WSBEiJ_P0027584 Ccdc85a protein_coding protein_coding MGP_WSBEiJ_T0027585.1 MGP_WSBEiJ_G0017470.1 mouse_genomes_project 11 26026265 26226354 - MGP_WSBEiJ_P0027585 Ccdc85a protein_coding protein_coding MGP_WSBEiJ_T0027586.1 MGP_WSBEiJ_G0017470.1 mouse_genomes_project 11 26225126 26232483 - Ccdc85a protein_coding retained_intron MGP_WSBEiJ_T0012435.1 MGP_WSBEiJ_G0010565.1 mouse_genomes_project 11 88337386 88338766 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032551.1 MGP_WSBEiJ_G0018725.1 mouse_genomes_project 11 117789004 117799244 - MGP_WSBEiJ_P0032551 Cd300c2 protein_coding protein_coding MGP_WSBEiJ_T0032552.1 MGP_WSBEiJ_G0018725.1 mouse_genomes_project 11 117789005 117799244 - MGP_WSBEiJ_P0032552 Cd300c2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012311.1 MGP_WSBEiJ_G0010441.1 mouse_genomes_project 11 38586530 38586996 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031107.1 MGP_WSBEiJ_G0018363.1 mouse_genomes_project 11 97707837 97710623 + Hoxb5 protein_coding retained_intron MGP_WSBEiJ_T0031108.1 MGP_WSBEiJ_G0018363.1 mouse_genomes_project 11 97708013 97710622 + MGP_WSBEiJ_P0031108 Hoxb5 protein_coding protein_coding MGP_WSBEiJ_T0031487.1 MGP_WSBEiJ_G0018474.1 mouse_genomes_project 11 101487502 101487580 - MGP_WSBEiJ_P0031487 Gm14180 protein_coding protein_coding MGP_WSBEiJ_T0097708.1 MGP_WSBEiJ_G0036371.1 mouse_genomes_project 11 73840989 73841096 + Gm22381 snRNA snRNA MGP_WSBEiJ_T0006209.1 MGP_WSBEiJ_G0005182.1 mouse_genomes_project 11 85495760 85510723 - Gm11431 lincRNA lincRNA MGP_WSBEiJ_T0031451.1 MGP_WSBEiJ_G0018443.1 mouse_genomes_project 11 100953543 100964836 - MGP_WSBEiJ_P0031451 Krt222 protein_coding protein_coding MGP_WSBEiJ_T0031452.1 MGP_WSBEiJ_G0018443.1 mouse_genomes_project 11 100954672 100964854 - MGP_WSBEiJ_P0031452 Krt222 protein_coding protein_coding MGP_WSBEiJ_T0031453.1 MGP_WSBEiJ_G0018443.1 mouse_genomes_project 11 100955709 100959651 - Krt222 protein_coding processed_transcript MGP_WSBEiJ_T0009538.1 MGP_WSBEiJ_G0007695.1 mouse_genomes_project 11 59427433 59427499 - Mir6922 miRNA miRNA MGP_WSBEiJ_T0100001.1 MGP_WSBEiJ_G0038645.1 mouse_genomes_project 11 109851971 109852346 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0097263.1 MGP_WSBEiJ_G0035943.1 mouse_genomes_project 11 162551 163890 - Gm11948 sense_intronic sense_intronic MGP_WSBEiJ_T0029619.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70821872 70829495 + MGP_WSBEiJ_P0029619 Rpain protein_coding protein_coding MGP_WSBEiJ_T0029620.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70821886 70823579 + MGP_WSBEiJ_P0029620 Rpain protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029621.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822139 70825821 + Rpain protein_coding retained_intron MGP_WSBEiJ_T0029622.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822145 70824009 + Rpain protein_coding retained_intron MGP_WSBEiJ_T0029623.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822150 70825151 + Rpain protein_coding retained_intron MGP_WSBEiJ_T0029624.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822166 70829349 + MGP_WSBEiJ_P0029624 Rpain protein_coding protein_coding MGP_WSBEiJ_T0029625.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822166 70829349 + MGP_WSBEiJ_P0029625 Rpain protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029626.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822166 70829349 + MGP_WSBEiJ_P0029626 Rpain protein_coding protein_coding MGP_WSBEiJ_T0029627.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822166 70829349 + MGP_WSBEiJ_P0029627 Rpain protein_coding protein_coding MGP_WSBEiJ_T0029628.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822166 70829349 + MGP_WSBEiJ_P0029628 Rpain protein_coding protein_coding MGP_WSBEiJ_T0029629.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70822188 70826088 + Rpain protein_coding retained_intron MGP_WSBEiJ_T0029630.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70824462 70829467 + Rpain protein_coding retained_intron MGP_WSBEiJ_T0029631.1 MGP_WSBEiJ_G0017981.1 mouse_genomes_project 11 70826398 70829463 + Rpain protein_coding retained_intron MGP_WSBEiJ_T0012486.1 MGP_WSBEiJ_G0010616.1 mouse_genomes_project 11 109478284 109478821 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027852.1 MGP_WSBEiJ_G0017538.1 mouse_genomes_project 11 41557266 41564542 - MGP_WSBEiJ_P0027852 Pttg1 protein_coding protein_coding MGP_WSBEiJ_T0027853.1 MGP_WSBEiJ_G0017538.1 mouse_genomes_project 11 41557270 41561308 - MGP_WSBEiJ_P0027853 Pttg1 protein_coding protein_coding MGP_WSBEiJ_T0027854.1 MGP_WSBEiJ_G0017538.1 mouse_genomes_project 11 41557283 41564301 - MGP_WSBEiJ_P0027854 Pttg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027855.1 MGP_WSBEiJ_G0017538.1 mouse_genomes_project 11 41558044 41564547 - MGP_WSBEiJ_P0027855 Pttg1 protein_coding protein_coding MGP_WSBEiJ_T0027856.1 MGP_WSBEiJ_G0017538.1 mouse_genomes_project 11 41561236 41564438 - Pttg1 protein_coding processed_transcript MGP_WSBEiJ_T0027857.1 MGP_WSBEiJ_G0017538.1 mouse_genomes_project 11 41562943 41564533 - Pttg1 protein_coding retained_intron MGP_WSBEiJ_T0030147.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78234839 78286981 + MGP_WSBEiJ_P0030147 Sez6 protein_coding protein_coding MGP_WSBEiJ_T0030148.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78234878 78286981 + Sez6 protein_coding retained_intron MGP_WSBEiJ_T0030149.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78234956 78269233 + Sez6 protein_coding retained_intron MGP_WSBEiJ_T0030150.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78235051 78286973 + MGP_WSBEiJ_P0030150 Sez6 protein_coding protein_coding MGP_WSBEiJ_T0030151.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78235078 78285994 + Sez6 protein_coding retained_intron MGP_WSBEiJ_T0030152.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78256655 78260014 + Sez6 protein_coding processed_transcript MGP_WSBEiJ_T0030153.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78259100 78286981 + MGP_WSBEiJ_P0030153 Sez6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030154.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78276955 78282429 + MGP_WSBEiJ_P0030154 Sez6 protein_coding protein_coding MGP_WSBEiJ_T0030155.1 MGP_WSBEiJ_G0018118.1 mouse_genomes_project 11 78281113 78282315 + Sez6 protein_coding retained_intron MGP_WSBEiJ_T0006105.1 MGP_WSBEiJ_G0005100.1 mouse_genomes_project 11 22157099 22166820 - Gm10466 lincRNA lincRNA MGP_WSBEiJ_T0016580.1 MGP_WSBEiJ_G0014579.1 mouse_genomes_project 11 26818623 26821274 - A630052C17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0031444.1 MGP_WSBEiJ_G0018441.1 mouse_genomes_project 11 100858577 100871638 - MGP_WSBEiJ_P0031444 Ccr7 protein_coding protein_coding MGP_WSBEiJ_T0031176.1 MGP_WSBEiJ_G0018378.1 mouse_genomes_project 11 98495351 98499372 + MGP_WSBEiJ_P0031176 Scrn2 protein_coding protein_coding MGP_WSBEiJ_T0031177.1 MGP_WSBEiJ_G0018378.1 mouse_genomes_project 11 98495365 98496620 + Scrn2 protein_coding retained_intron MGP_WSBEiJ_T0031178.1 MGP_WSBEiJ_G0018378.1 mouse_genomes_project 11 98495414 98499364 + Scrn2 protein_coding retained_intron MGP_WSBEiJ_T0031179.1 MGP_WSBEiJ_G0018378.1 mouse_genomes_project 11 98495547 98497690 + MGP_WSBEiJ_P0031179 Scrn2 protein_coding protein_coding MGP_WSBEiJ_T0006224.1 MGP_WSBEiJ_G0005193.1 mouse_genomes_project 11 91179976 91188692 - Gm11494 lincRNA lincRNA MGP_WSBEiJ_T0031642.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102879368 102891262 + Atp6v0a1 protein_coding processed_transcript MGP_WSBEiJ_T0031643.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102879368 102915297 + Atp6v0a1 protein_coding processed_transcript MGP_WSBEiJ_T0031644.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102879368 102932893 + MGP_WSBEiJ_P0031644 Atp6v0a1 protein_coding protein_coding MGP_WSBEiJ_T0031645.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102879368 102934188 + MGP_WSBEiJ_P0031645 Atp6v0a1 protein_coding protein_coding MGP_WSBEiJ_T0031646.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102879403 102934182 + MGP_WSBEiJ_P0031646 Atp6v0a1 protein_coding protein_coding MGP_WSBEiJ_T0031647.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102880572 102890368 + MGP_WSBEiJ_P0031647 Atp6v0a1 protein_coding protein_coding MGP_WSBEiJ_T0031648.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102881744 102934188 + MGP_WSBEiJ_P0031648 Atp6v0a1 protein_coding protein_coding MGP_WSBEiJ_T0031649.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102890988 102897378 + Atp6v0a1 protein_coding processed_transcript MGP_WSBEiJ_T0031650.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102910319 102919706 + Atp6v0a1 protein_coding processed_transcript MGP_WSBEiJ_T0031651.1 MGP_WSBEiJ_G0018529.1 mouse_genomes_project 11 102914288 102915300 + Atp6v0a1 protein_coding processed_transcript MGP_WSBEiJ_T0030806.1 MGP_WSBEiJ_G0018282.1 mouse_genomes_project 11 89240903 89242105 + MGP_WSBEiJ_P0030806 Ccdc182 protein_coding protein_coding MGP_WSBEiJ_T0032911.1 MGP_WSBEiJ_G0018792.1 mouse_genomes_project 11 119595589 119601566 + MGP_WSBEiJ_P0032911 1810032O08Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032912.1 MGP_WSBEiJ_G0018792.1 mouse_genomes_project 11 119595598 119601566 + MGP_WSBEiJ_P0032912 1810032O08Rik protein_coding protein_coding MGP_WSBEiJ_T0032913.1 MGP_WSBEiJ_G0018792.1 mouse_genomes_project 11 119595598 119601563 + MGP_WSBEiJ_P0032913 1810032O08Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032914.1 MGP_WSBEiJ_G0018792.1 mouse_genomes_project 11 119595625 119596552 + 1810032O08Rik protein_coding retained_intron MGP_WSBEiJ_T0032915.1 MGP_WSBEiJ_G0018792.1 mouse_genomes_project 11 119595637 119598517 + MGP_WSBEiJ_P0032915 1810032O08Rik protein_coding protein_coding MGP_WSBEiJ_T0032916.1 MGP_WSBEiJ_G0018792.1 mouse_genomes_project 11 119595810 119597904 + MGP_WSBEiJ_P0032916 1810032O08Rik protein_coding protein_coding MGP_WSBEiJ_T0032917.1 MGP_WSBEiJ_G0018792.1 mouse_genomes_project 11 119596621 119601567 + MGP_WSBEiJ_P0032917 1810032O08Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029813.1 MGP_WSBEiJ_G0018038.1 mouse_genomes_project 11 73952703 73953636 - MGP_WSBEiJ_P0029813 Olfr394 protein_coding protein_coding MGP_WSBEiJ_T0033267.1 MGP_WSBEiJ_G0018860.1 mouse_genomes_project 11 123662935 123667413 + MGP_WSBEiJ_P0033267 Mrpl12 protein_coding protein_coding MGP_WSBEiJ_T0033268.1 MGP_WSBEiJ_G0018860.1 mouse_genomes_project 11 123663349 123666805 + Mrpl12 protein_coding processed_transcript MGP_WSBEiJ_T0009593.1 MGP_WSBEiJ_G0007750.1 mouse_genomes_project 11 99480556 99480626 - Gm22461 miRNA miRNA MGP_WSBEiJ_T0029289.1 MGP_WSBEiJ_G0017914.1 mouse_genomes_project 11 69529711 69531790 - MGP_WSBEiJ_P0029289 Slc35g3 protein_coding protein_coding MGP_WSBEiJ_T0011113.1 MGP_WSBEiJ_G0009270.1 mouse_genomes_project 11 87154656 87154759 + Gm25427 misc_RNA misc_RNA MGP_WSBEiJ_T0027942.1 MGP_WSBEiJ_G0017565.1 mouse_genomes_project 11 44860579 44881276 + MGP_WSBEiJ_P0027942 protein_coding protein_coding MGP_WSBEiJ_T0032264.1 MGP_WSBEiJ_G0018661.1 mouse_genomes_project 11 108577450 108589647 + MGP_WSBEiJ_P0032264 Prr29 protein_coding protein_coding MGP_WSBEiJ_T0032265.1 MGP_WSBEiJ_G0018661.1 mouse_genomes_project 11 108586242 108589775 + MGP_WSBEiJ_P0032265 Prr29 protein_coding protein_coding MGP_WSBEiJ_T0032266.1 MGP_WSBEiJ_G0018661.1 mouse_genomes_project 11 108586242 108590091 + MGP_WSBEiJ_P0032266 Prr29 protein_coding protein_coding MGP_WSBEiJ_T0032267.1 MGP_WSBEiJ_G0018661.1 mouse_genomes_project 11 108586242 108589881 + MGP_WSBEiJ_P0032267 Prr29 protein_coding protein_coding MGP_WSBEiJ_T0032268.1 MGP_WSBEiJ_G0018661.1 mouse_genomes_project 11 108586255 108589454 + MGP_WSBEiJ_P0032268 Prr29 protein_coding protein_coding MGP_WSBEiJ_T0032034.1 MGP_WSBEiJ_G0018605.1 mouse_genomes_project 11 104994344 105001775 - MGP_WSBEiJ_P0032034 C1ql1 protein_coding protein_coding MGP_WSBEiJ_T0012508.1 MGP_WSBEiJ_G0010638.1 mouse_genomes_project 11 120963694 120964153 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029768.1 MGP_WSBEiJ_G0018017.1 mouse_genomes_project 11 73185451 73194950 + MGP_WSBEiJ_P0029768 Tax1bp3 protein_coding protein_coding MGP_WSBEiJ_T0029769.1 MGP_WSBEiJ_G0018017.1 mouse_genomes_project 11 73185619 73193483 + Tax1bp3 protein_coding processed_transcript MGP_WSBEiJ_T0029770.1 MGP_WSBEiJ_G0018017.1 mouse_genomes_project 11 73185619 73197061 + Tax1bp3 protein_coding retained_intron MGP_WSBEiJ_T0029771.1 MGP_WSBEiJ_G0018017.1 mouse_genomes_project 11 73185638 73194845 + MGP_WSBEiJ_P0029771 Tax1bp3 protein_coding protein_coding MGP_WSBEiJ_T0033049.1 MGP_WSBEiJ_G0018820.1 mouse_genomes_project 11 121389543 121399374 - MGP_WSBEiJ_P0033049 BC100451 protein_coding protein_coding MGP_WSBEiJ_T0033050.1 MGP_WSBEiJ_G0018820.1 mouse_genomes_project 11 121389598 121391200 - MGP_WSBEiJ_P0033050 BC100451 protein_coding protein_coding MGP_WSBEiJ_T0012211.1 MGP_WSBEiJ_G0010341.1 mouse_genomes_project 11 1837894 1838388 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098936.1 MGP_WSBEiJ_G0037599.1 mouse_genomes_project 11 77293831 77293952 + Gm22772 snoRNA snoRNA MGP_WSBEiJ_T0031567.1 MGP_WSBEiJ_G0018513.1 mouse_genomes_project 11 102373259 102399451 + Ttc25 protein_coding retained_intron MGP_WSBEiJ_T0031568.1 MGP_WSBEiJ_G0018513.1 mouse_genomes_project 11 102373275 102377780 + Ttc25 protein_coding retained_intron MGP_WSBEiJ_T0031569.1 MGP_WSBEiJ_G0018513.1 mouse_genomes_project 11 102373366 102401433 + MGP_WSBEiJ_P0031569 Ttc25 protein_coding protein_coding MGP_WSBEiJ_T0031570.1 MGP_WSBEiJ_G0018513.1 mouse_genomes_project 11 102377116 102377898 + Ttc25 protein_coding retained_intron MGP_WSBEiJ_T0028572.1 MGP_WSBEiJ_G0017754.1 mouse_genomes_project 11 58381481 58382435 - MGP_WSBEiJ_P0028572 Arf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028573.1 MGP_WSBEiJ_G0017754.1 mouse_genomes_project 11 58381481 58382384 - MGP_WSBEiJ_P0028573 Arf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029432.1 MGP_WSBEiJ_G0017944.1 mouse_genomes_project 11 69925703 69931063 + protein_coding processed_transcript MGP_WSBEiJ_T0097688.1 MGP_WSBEiJ_G0036351.1 mouse_genomes_project 11 36826420 36826527 - Gm23520 snRNA snRNA MGP_WSBEiJ_T0006200.1 MGP_WSBEiJ_G0005177.1 mouse_genomes_project 11 83237882 83240841 + Gm11426 lincRNA lincRNA MGP_WSBEiJ_T0097735.1 MGP_WSBEiJ_G0036398.1 mouse_genomes_project 11 103303102 103303286 - Gm25475 snRNA snRNA MGP_WSBEiJ_T0009518.1 MGP_WSBEiJ_G0007675.1 mouse_genomes_project 11 33696203 33696289 + Mir103-1 miRNA miRNA MGP_WSBEiJ_T0031491.1 MGP_WSBEiJ_G0018478.1 mouse_genomes_project 11 101594606 101596533 - MGP_WSBEiJ_P0031491 Gm11564 protein_coding protein_coding MGP_WSBEiJ_T0031455.1 MGP_WSBEiJ_G0018445.1 mouse_genomes_project 11 101044778 101052217 - MGP_WSBEiJ_P0031455 Krt25 protein_coding protein_coding MGP_WSBEiJ_T0029947.1 MGP_WSBEiJ_G0018078.1 mouse_genomes_project 11 75753059 75799658 + MGP_WSBEiJ_P0029947 Pitpna protein_coding protein_coding MGP_WSBEiJ_T0029948.1 MGP_WSBEiJ_G0018078.1 mouse_genomes_project 11 75753070 75799632 + MGP_WSBEiJ_P0029948 Pitpna protein_coding protein_coding MGP_WSBEiJ_T0029949.1 MGP_WSBEiJ_G0018078.1 mouse_genomes_project 11 75753081 75797584 + MGP_WSBEiJ_P0029949 Pitpna protein_coding protein_coding MGP_WSBEiJ_T0029950.1 MGP_WSBEiJ_G0018078.1 mouse_genomes_project 11 75753121 75763519 + Pitpna protein_coding retained_intron MGP_WSBEiJ_T0029951.1 MGP_WSBEiJ_G0018078.1 mouse_genomes_project 11 75753121 75797287 + MGP_WSBEiJ_P0029951 Pitpna protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029952.1 MGP_WSBEiJ_G0018078.1 mouse_genomes_project 11 75791544 75797160 + Pitpna protein_coding processed_transcript MGP_WSBEiJ_T0003071.1 MGP_WSBEiJ_G0002858.1 mouse_genomes_project 11 34218344 34220282 + Gm12127 antisense antisense MGP_WSBEiJ_T0012507.1 MGP_WSBEiJ_G0010637.1 mouse_genomes_project 11 120111044 120111492 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009558.1 MGP_WSBEiJ_G0007715.1 mouse_genomes_project 11 70604664 70604757 - Gm22760 miRNA miRNA MGP_WSBEiJ_T0029393.1 MGP_WSBEiJ_G0017938.1 mouse_genomes_project 11 69781368 69785409 + MGP_WSBEiJ_P0029393 Phf23 protein_coding protein_coding MGP_WSBEiJ_T0029394.1 MGP_WSBEiJ_G0017938.1 mouse_genomes_project 11 69781486 69783776 + Phf23 protein_coding retained_intron MGP_WSBEiJ_T0029395.1 MGP_WSBEiJ_G0017938.1 mouse_genomes_project 11 69781512 69785406 + MGP_WSBEiJ_P0029395 Phf23 protein_coding protein_coding MGP_WSBEiJ_T0029396.1 MGP_WSBEiJ_G0017938.1 mouse_genomes_project 11 69782222 69784151 + MGP_WSBEiJ_P0029396 Phf23 protein_coding protein_coding MGP_WSBEiJ_T0029397.1 MGP_WSBEiJ_G0017938.1 mouse_genomes_project 11 69782432 69783896 + Phf23 protein_coding processed_transcript MGP_WSBEiJ_T0029398.1 MGP_WSBEiJ_G0017938.1 mouse_genomes_project 11 69782448 69783797 + Phf23 protein_coding processed_transcript MGP_WSBEiJ_T0016640.1 MGP_WSBEiJ_G0014612.1 mouse_genomes_project 11 97232423 97234598 + 4833417C18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0097742.1 MGP_WSBEiJ_G0036405.1 mouse_genomes_project 11 109029428 109029535 - Gm25889 snRNA snRNA MGP_WSBEiJ_T0009547.1 MGP_WSBEiJ_G0007704.1 mouse_genomes_project 11 69253605 69253683 - Gm27493 miRNA miRNA MGP_WSBEiJ_T0003233.1 MGP_WSBEiJ_G0002991.1 mouse_genomes_project 11 105254810 105257003 - Gm20511 antisense antisense MGP_WSBEiJ_T0032541.1 MGP_WSBEiJ_G0018720.1 mouse_genomes_project 11 117676710 117690791 + MGP_WSBEiJ_P0032541 Cd300a protein_coding protein_coding MGP_WSBEiJ_T0032542.1 MGP_WSBEiJ_G0018720.1 mouse_genomes_project 11 117676965 117680146 + Cd300a protein_coding processed_transcript MGP_WSBEiJ_T0030041.1 MGP_WSBEiJ_G0018096.1 mouse_genomes_project 11 76903230 76904437 + MGP_WSBEiJ_P0030041 Bhlha9 protein_coding protein_coding MGP_WSBEiJ_T0031925.1 MGP_WSBEiJ_G0018586.1 mouse_genomes_project 11 104356896 104374798 - MGP_WSBEiJ_P0031925 Slc4a1 protein_coding protein_coding MGP_WSBEiJ_T0031926.1 MGP_WSBEiJ_G0018586.1 mouse_genomes_project 11 104368597 104370084 - Slc4a1 protein_coding processed_transcript MGP_WSBEiJ_T0031927.1 MGP_WSBEiJ_G0018586.1 mouse_genomes_project 11 104369677 104373222 - Slc4a1 protein_coding processed_transcript MGP_WSBEiJ_T0031928.1 MGP_WSBEiJ_G0018586.1 mouse_genomes_project 11 104369710 104374765 - Slc4a1 protein_coding processed_transcript MGP_WSBEiJ_T0031929.1 MGP_WSBEiJ_G0018586.1 mouse_genomes_project 11 104370897 104375721 - Slc4a1 protein_coding processed_transcript MGP_WSBEiJ_T0006229.1 MGP_WSBEiJ_G0005196.1 mouse_genomes_project 11 96980570 96987737 + Gm11528 lincRNA lincRNA MGP_WSBEiJ_T0029331.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69674368 69677896 - MGP_WSBEiJ_P0029331 2810408A11Rik protein_coding protein_coding MGP_WSBEiJ_T0029332.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69674374 69677888 - MGP_WSBEiJ_P0029332 2810408A11Rik protein_coding protein_coding MGP_WSBEiJ_T0029333.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69674379 69677959 - MGP_WSBEiJ_P0029333 2810408A11Rik protein_coding protein_coding MGP_WSBEiJ_T0029334.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69674379 69677977 - MGP_WSBEiJ_P0029334 2810408A11Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029335.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69674379 69677940 - MGP_WSBEiJ_P0029335 2810408A11Rik protein_coding protein_coding MGP_WSBEiJ_T0029336.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69674482 69677989 - 2810408A11Rik protein_coding retained_intron MGP_WSBEiJ_T0029337.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69674482 69677959 - MGP_WSBEiJ_P0029337 2810408A11Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029338.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69675221 69676661 - 2810408A11Rik protein_coding retained_intron MGP_WSBEiJ_T0029339.1 MGP_WSBEiJ_G0017928.1 mouse_genomes_project 11 69676226 69677941 - MGP_WSBEiJ_P0029339 2810408A11Rik protein_coding protein_coding MGP_WSBEiJ_T0003255.1 MGP_WSBEiJ_G0003011.1 mouse_genomes_project 11 111298000 111300713 - Gm11670 antisense antisense MGP_WSBEiJ_T0027149.1 MGP_WSBEiJ_G0017368.1 mouse_genomes_project 11 2033787 2081948 - MGP_WSBEiJ_P0027149 Emid1 protein_coding protein_coding MGP_WSBEiJ_T0027150.1 MGP_WSBEiJ_G0017368.1 mouse_genomes_project 11 2033787 2060598 - MGP_WSBEiJ_P0027150 Emid1 protein_coding protein_coding MGP_WSBEiJ_T0027151.1 MGP_WSBEiJ_G0017368.1 mouse_genomes_project 11 2033788 2081931 - MGP_WSBEiJ_P0027151 Emid1 protein_coding protein_coding MGP_WSBEiJ_T0027152.1 MGP_WSBEiJ_G0017368.1 mouse_genomes_project 11 2033793 2059300 - MGP_WSBEiJ_P0027152 Emid1 protein_coding protein_coding MGP_WSBEiJ_T0027153.1 MGP_WSBEiJ_G0017368.1 mouse_genomes_project 11 2034167 2059062 - Emid1 protein_coding retained_intron MGP_WSBEiJ_T0027154.1 MGP_WSBEiJ_G0017368.1 mouse_genomes_project 11 2034429 2058883 - MGP_WSBEiJ_P0027154 Emid1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027155.1 MGP_WSBEiJ_G0017368.1 mouse_genomes_project 11 2061794 2081928 - MGP_WSBEiJ_P0027155 Emid1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027156.1 MGP_WSBEiJ_G0017368.1 mouse_genomes_project 11 2065223 2079975 - Emid1 protein_coding processed_transcript MGP_WSBEiJ_T0032454.1 MGP_WSBEiJ_G0018701.1 mouse_genomes_project 11 112863735 113004306 + MGP_WSBEiJ_P0032454 Map2k6 protein_coding protein_coding MGP_WSBEiJ_T0032455.1 MGP_WSBEiJ_G0018701.1 mouse_genomes_project 11 112863735 112992443 + MGP_WSBEiJ_P0032455 Map2k6 protein_coding protein_coding MGP_WSBEiJ_T0032456.1 MGP_WSBEiJ_G0018701.1 mouse_genomes_project 11 112863872 112992443 + Map2k6 protein_coding processed_transcript MGP_WSBEiJ_T0032457.1 MGP_WSBEiJ_G0018701.1 mouse_genomes_project 11 112953593 112978344 + Map2k6 protein_coding processed_transcript MGP_WSBEiJ_T0032458.1 MGP_WSBEiJ_G0018701.1 mouse_genomes_project 11 112955737 112976749 + Map2k6 protein_coding processed_transcript MGP_WSBEiJ_T0098917.1 MGP_WSBEiJ_G0037580.1 mouse_genomes_project 11 47147914 47147982 + Snord95 snoRNA snoRNA MGP_WSBEiJ_T0100218.1 MGP_WSBEiJ_G0038770.1 mouse_genomes_project 11 71163096 71205253 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0006129.1 MGP_WSBEiJ_G0005119.1 mouse_genomes_project 11 38106431 38421050 + lincRNA lincRNA MGP_WSBEiJ_T0030719.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88436092 88454781 + MGP_WSBEiJ_P0030719 Sept4 protein_coding protein_coding MGP_WSBEiJ_T0030720.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88445608 88458741 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030721.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88445643 88460094 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030722.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88445652 88455571 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030723.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88445666 88460094 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030724.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88445680 88455399 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030725.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88445731 88460100 + MGP_WSBEiJ_P0030725 Sept4 protein_coding protein_coding MGP_WSBEiJ_T0030726.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88446124 88458829 + MGP_WSBEiJ_P0030726 Sept4 protein_coding protein_coding MGP_WSBEiJ_T0030727.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88449184 88460094 + MGP_WSBEiJ_P0030727 Sept4 protein_coding protein_coding MGP_WSBEiJ_T0030728.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88449204 88459930 + MGP_WSBEiJ_P0030728 Sept4 protein_coding protein_coding MGP_WSBEiJ_T0030729.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88449212 88455571 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030730.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88449217 88460094 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030731.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88450352 88458596 + MGP_WSBEiJ_P0030731 Sept4 protein_coding protein_coding MGP_WSBEiJ_T0030732.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88454764 88459419 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030733.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88458422 88459549 + Sept4 protein_coding retained_intron MGP_WSBEiJ_T0030734.1 MGP_WSBEiJ_G0018266.1 mouse_genomes_project 11 88459031 88460094 + Sept4 protein_coding processed_transcript MGP_WSBEiJ_T0028462.1 MGP_WSBEiJ_G0017706.1 mouse_genomes_project 11 57091366 57106890 + MGP_WSBEiJ_P0028462 Cnot8 protein_coding protein_coding MGP_WSBEiJ_T0028463.1 MGP_WSBEiJ_G0017706.1 mouse_genomes_project 11 57091442 57106890 + MGP_WSBEiJ_P0028463 Cnot8 protein_coding protein_coding MGP_WSBEiJ_T0028464.1 MGP_WSBEiJ_G0017706.1 mouse_genomes_project 11 57091579 57098371 + MGP_WSBEiJ_P0028464 Cnot8 protein_coding protein_coding MGP_WSBEiJ_T0028465.1 MGP_WSBEiJ_G0017706.1 mouse_genomes_project 11 57101036 57105554 + Cnot8 protein_coding processed_transcript MGP_WSBEiJ_T0100000.1 MGP_WSBEiJ_G0038644.1 mouse_genomes_project 11 106706990 106708317 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0032362.1 MGP_WSBEiJ_G0018681.1 mouse_genomes_project 11 110697627 110749852 + MGP_WSBEiJ_P0032362 Apoh protein_coding protein_coding MGP_WSBEiJ_T0032363.1 MGP_WSBEiJ_G0018681.1 mouse_genomes_project 11 110739400 110749797 + MGP_WSBEiJ_P0032363 Apoh protein_coding protein_coding MGP_WSBEiJ_T0032364.1 MGP_WSBEiJ_G0018681.1 mouse_genomes_project 11 110739405 110761214 + MGP_WSBEiJ_P0032364 Apoh protein_coding protein_coding MGP_WSBEiJ_T0032365.1 MGP_WSBEiJ_G0018681.1 mouse_genomes_project 11 110749239 110767753 + MGP_WSBEiJ_P0032365 Apoh protein_coding protein_coding MGP_WSBEiJ_T0032219.1 MGP_WSBEiJ_G0018647.1 mouse_genomes_project 11 108267810 108275377 + MGP_WSBEiJ_P0032219 Taco1 protein_coding protein_coding MGP_WSBEiJ_T0006186.1 MGP_WSBEiJ_G0005167.1 mouse_genomes_project 11 75566639 75567256 - Gm12336 lincRNA lincRNA MGP_WSBEiJ_T0098945.1 MGP_WSBEiJ_G0037608.1 mouse_genomes_project 11 84035268 84035400 - Gm23951 snoRNA snoRNA MGP_WSBEiJ_T0100479.1 MGP_WSBEiJ_G0038938.1 mouse_genomes_project 11 73810802 73811361 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0096766.1 MGP_WSBEiJ_G0035447.1 mouse_genomes_project 11 116128752 116132795 + pseudogene pseudogene MGP_WSBEiJ_T0029056.1 MGP_WSBEiJ_G0017863.1 mouse_genomes_project 11 68127789 68179320 + MGP_WSBEiJ_P0029056 Pik3r6 protein_coding protein_coding MGP_WSBEiJ_T0029057.1 MGP_WSBEiJ_G0017863.1 mouse_genomes_project 11 68127789 68179320 + MGP_WSBEiJ_P0029057 Pik3r6 protein_coding protein_coding MGP_WSBEiJ_T0029058.1 MGP_WSBEiJ_G0017863.1 mouse_genomes_project 11 68127861 68179320 + Pik3r6 protein_coding processed_transcript MGP_WSBEiJ_T0029059.1 MGP_WSBEiJ_G0017863.1 mouse_genomes_project 11 68162959 68170965 + Pik3r6 protein_coding processed_transcript MGP_WSBEiJ_T0029060.1 MGP_WSBEiJ_G0017863.1 mouse_genomes_project 11 68178685 68179318 + Pik3r6 protein_coding processed_transcript MGP_WSBEiJ_T0012223.1 MGP_WSBEiJ_G0010353.1 mouse_genomes_project 11 3833380 3833694 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030691.1 MGP_WSBEiJ_G0018255.1 mouse_genomes_project 11 87608056 87647506 - MGP_WSBEiJ_P0030691 Dhx40 protein_coding protein_coding MGP_WSBEiJ_T0030692.1 MGP_WSBEiJ_G0018255.1 mouse_genomes_project 11 87614849 87640858 - MGP_WSBEiJ_P0030692 Dhx40 protein_coding protein_coding MGP_WSBEiJ_T0030693.1 MGP_WSBEiJ_G0018255.1 mouse_genomes_project 11 87623767 87628451 - Dhx40 protein_coding processed_transcript MGP_WSBEiJ_T0030694.1 MGP_WSBEiJ_G0018255.1 mouse_genomes_project 11 87639332 87646799 - Dhx40 protein_coding processed_transcript MGP_WSBEiJ_T0012462.1 MGP_WSBEiJ_G0010592.1 mouse_genomes_project 11 101774432 101774891 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029081.1 MGP_WSBEiJ_G0017869.1 mouse_genomes_project 11 68561566 68564644 + MGP_WSBEiJ_P0029081 protein_coding protein_coding MGP_WSBEiJ_T0029082.1 MGP_WSBEiJ_G0017869.1 mouse_genomes_project 11 68561593 68564620 + MGP_WSBEiJ_P0029082 protein_coding protein_coding MGP_WSBEiJ_T0029083.1 MGP_WSBEiJ_G0017869.1 mouse_genomes_project 11 68561610 68563429 + MGP_WSBEiJ_P0029083 protein_coding protein_coding MGP_WSBEiJ_T0029084.1 MGP_WSBEiJ_G0017869.1 mouse_genomes_project 11 68561618 68564643 + MGP_WSBEiJ_P0029084 protein_coding protein_coding MGP_WSBEiJ_T0029085.1 MGP_WSBEiJ_G0017869.1 mouse_genomes_project 11 68562962 68564643 + protein_coding retained_intron MGP_WSBEiJ_T0029086.1 MGP_WSBEiJ_G0017869.1 mouse_genomes_project 11 68563343 68567097 + protein_coding processed_transcript MGP_WSBEiJ_T0012474.1 MGP_WSBEiJ_G0010604.1 mouse_genomes_project 11 105981147 105981474 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032675.1 MGP_WSBEiJ_G0018751.1 mouse_genomes_project 11 118453367 118457475 + MGP_WSBEiJ_P0032675 Mrps7 protein_coding protein_coding MGP_WSBEiJ_T0032676.1 MGP_WSBEiJ_G0018751.1 mouse_genomes_project 11 118454309 118456443 + Mrps7 protein_coding processed_transcript MGP_WSBEiJ_T0016690.1 MGP_WSBEiJ_G0014638.1 mouse_genomes_project 11 121540572 121543638 - Gm11748 processed_transcript processed_transcript MGP_WSBEiJ_T0032026.1 MGP_WSBEiJ_G0018601.1 mouse_genomes_project 11 104932810 104936828 + MGP_WSBEiJ_P0032026 Ccdc103 protein_coding protein_coding MGP_WSBEiJ_T0032027.1 MGP_WSBEiJ_G0018601.1 mouse_genomes_project 11 104932851 104936138 + MGP_WSBEiJ_P0032027 Ccdc103 protein_coding protein_coding MGP_WSBEiJ_T0003094.1 MGP_WSBEiJ_G0002880.1 mouse_genomes_project 11 53548022 53555294 + Gm12227 antisense antisense MGP_WSBEiJ_T0028577.1 MGP_WSBEiJ_G0017757.1 mouse_genomes_project 11 58555949 58558935 - MGP_WSBEiJ_P0028577 Prss38 protein_coding protein_coding MGP_WSBEiJ_T0030843.1 MGP_WSBEiJ_G0018297.1 mouse_genomes_project 11 91389238 91446032 - MGP_WSBEiJ_P0030843 Hlf protein_coding protein_coding MGP_WSBEiJ_T0030844.1 MGP_WSBEiJ_G0018297.1 mouse_genomes_project 11 91391700 91444827 - Hlf protein_coding processed_transcript MGP_WSBEiJ_T0030845.1 MGP_WSBEiJ_G0018297.1 mouse_genomes_project 11 91391852 91442408 - Hlf protein_coding processed_transcript MGP_WSBEiJ_T0030846.1 MGP_WSBEiJ_G0018297.1 mouse_genomes_project 11 91393536 91436091 - Hlf protein_coding processed_transcript MGP_WSBEiJ_T0030847.1 MGP_WSBEiJ_G0018297.1 mouse_genomes_project 11 91398257 91442174 - MGP_WSBEiJ_P0030847 Hlf protein_coding protein_coding MGP_WSBEiJ_T0030848.1 MGP_WSBEiJ_G0018297.1 mouse_genomes_project 11 91442123 91444727 - Hlf protein_coding processed_transcript MGP_WSBEiJ_T0028090.1 MGP_WSBEiJ_G0017611.1 mouse_genomes_project 11 48767745 48771125 - MGP_WSBEiJ_P0028090 protein_coding protein_coding MGP_WSBEiJ_T0028091.1 MGP_WSBEiJ_G0017611.1 mouse_genomes_project 11 48767748 48771186 - MGP_WSBEiJ_P0028091 protein_coding protein_coding MGP_WSBEiJ_T0028092.1 MGP_WSBEiJ_G0017611.1 mouse_genomes_project 11 48767748 48771270 - MGP_WSBEiJ_P0028092 protein_coding protein_coding MGP_WSBEiJ_T0033191.1 MGP_WSBEiJ_G0018846.1 mouse_genomes_project 11 123262496 123264274 + MGP_WSBEiJ_P0033191 1810043H04Rik protein_coding protein_coding MGP_WSBEiJ_T0033192.1 MGP_WSBEiJ_G0018846.1 mouse_genomes_project 11 123262512 123263932 + MGP_WSBEiJ_P0033192 1810043H04Rik protein_coding protein_coding MGP_WSBEiJ_T0033193.1 MGP_WSBEiJ_G0018846.1 mouse_genomes_project 11 123262667 123263983 + 1810043H04Rik protein_coding retained_intron MGP_WSBEiJ_T0031022.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96611272 96648760 - MGP_WSBEiJ_P0031022 Kat7 protein_coding protein_coding MGP_WSBEiJ_T0031023.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96611272 96649359 - MGP_WSBEiJ_P0031023 Kat7 protein_coding protein_coding MGP_WSBEiJ_T0031024.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96611272 96648760 - MGP_WSBEiJ_P0031024 Kat7 protein_coding protein_coding MGP_WSBEiJ_T0031025.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96611272 96649404 - MGP_WSBEiJ_P0031025 Kat7 protein_coding protein_coding MGP_WSBEiJ_T0031026.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96611272 96649404 - MGP_WSBEiJ_P0031026 Kat7 protein_coding protein_coding MGP_WSBEiJ_T0031027.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96612337 96619008 - MGP_WSBEiJ_P0031027 Kat7 protein_coding protein_coding MGP_WSBEiJ_T0031028.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96619015 96649347 - Kat7 protein_coding processed_transcript MGP_WSBEiJ_T0031029.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96621265 96629510 - Kat7 protein_coding processed_transcript MGP_WSBEiJ_T0031030.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96640653 96649366 - Kat7 protein_coding processed_transcript MGP_WSBEiJ_T0031031.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96642303 96648671 - Kat7 protein_coding processed_transcript MGP_WSBEiJ_T0031032.1 MGP_WSBEiJ_G0018338.1 mouse_genomes_project 11 96645239 96648727 - Kat7 protein_coding processed_transcript MGP_WSBEiJ_T0031601.1 MGP_WSBEiJ_G0018519.1 mouse_genomes_project 11 102540312 102547740 - Kat2a protein_coding processed_transcript MGP_WSBEiJ_T0031602.1 MGP_WSBEiJ_G0018519.1 mouse_genomes_project 11 102540312 102548016 - Kat2a protein_coding processed_transcript MGP_WSBEiJ_T0031603.1 MGP_WSBEiJ_G0018519.1 mouse_genomes_project 11 102540312 102548032 - MGP_WSBEiJ_P0031603 Kat2a protein_coding protein_coding MGP_WSBEiJ_T0031604.1 MGP_WSBEiJ_G0018519.1 mouse_genomes_project 11 102540312 102548032 - MGP_WSBEiJ_P0031604 Kat2a protein_coding protein_coding MGP_WSBEiJ_T0033441.1 MGP_WSBEiJ_G0018896.1 mouse_genomes_project 11 124389338 124418814 - MGP_WSBEiJ_P0033441 Ogfod3 protein_coding protein_coding MGP_WSBEiJ_T0012219.1 MGP_WSBEiJ_G0010349.1 mouse_genomes_project 11 3563088 3563531 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003223.1 MGP_WSBEiJ_G0002981.1 mouse_genomes_project 11 103152669 103154199 - Gm11615 antisense antisense MGP_WSBEiJ_T0027443.1 MGP_WSBEiJ_G0017440.1 mouse_genomes_project 11 18389973 18442750 + Peli1 protein_coding retained_intron MGP_WSBEiJ_T0027444.1 MGP_WSBEiJ_G0017440.1 mouse_genomes_project 11 18389973 18451594 + MGP_WSBEiJ_P0027444 Peli1 protein_coding protein_coding MGP_WSBEiJ_T0027445.1 MGP_WSBEiJ_G0017440.1 mouse_genomes_project 11 18390800 18450672 + Peli1 protein_coding retained_intron MGP_WSBEiJ_T0027446.1 MGP_WSBEiJ_G0017440.1 mouse_genomes_project 11 18436109 18451594 + MGP_WSBEiJ_P0027446 Peli1 protein_coding protein_coding MGP_WSBEiJ_T0098958.1 MGP_WSBEiJ_G0037621.1 mouse_genomes_project 11 108731902 108732035 + Gm22711 snoRNA snoRNA MGP_WSBEiJ_T0033129.1 MGP_WSBEiJ_G0018836.1 mouse_genomes_project 11 122479637 122486242 + Slc26a11 protein_coding processed_transcript MGP_WSBEiJ_T0033130.1 MGP_WSBEiJ_G0018836.1 mouse_genomes_project 11 122479642 122495443 + Slc26a11 protein_coding processed_transcript MGP_WSBEiJ_T0033131.1 MGP_WSBEiJ_G0018836.1 mouse_genomes_project 11 122479662 122505408 + MGP_WSBEiJ_P0033131 Slc26a11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033132.1 MGP_WSBEiJ_G0018836.1 mouse_genomes_project 11 122486635 122505430 + Slc26a11 protein_coding processed_transcript MGP_WSBEiJ_T0003086.1 MGP_WSBEiJ_G0002873.1 mouse_genomes_project 11 50880538 50884686 + Gm12207 antisense antisense MGP_WSBEiJ_T0006154.1 MGP_WSBEiJ_G0005142.1 mouse_genomes_project 11 59126331 59126723 + 1810063I02Rik lincRNA lincRNA MGP_WSBEiJ_T0098910.1 MGP_WSBEiJ_G0037573.1 mouse_genomes_project 11 27524295 27524435 + Gm22588 snoRNA snoRNA MGP_WSBEiJ_T0009627.1 MGP_WSBEiJ_G0007784.1 mouse_genomes_project 11 123515253 123515307 - Mir6935 miRNA miRNA MGP_WSBEiJ_T0027968.1 MGP_WSBEiJ_G0017573.1 mouse_genomes_project 11 47187155 47200251 + MGP_WSBEiJ_P0027968 protein_coding protein_coding MGP_WSBEiJ_T0027969.1 MGP_WSBEiJ_G0017573.1 mouse_genomes_project 11 47187161 47191120 + MGP_WSBEiJ_P0027969 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027970.1 MGP_WSBEiJ_G0017573.1 mouse_genomes_project 11 47188204 47195230 + MGP_WSBEiJ_P0027970 protein_coding protein_coding MGP_WSBEiJ_T0027971.1 MGP_WSBEiJ_G0017573.1 mouse_genomes_project 11 47188494 47195287 + MGP_WSBEiJ_P0027971 protein_coding protein_coding MGP_WSBEiJ_T0027972.1 MGP_WSBEiJ_G0017573.1 mouse_genomes_project 11 47188527 47200877 + MGP_WSBEiJ_P0027972 protein_coding protein_coding MGP_WSBEiJ_T0027973.1 MGP_WSBEiJ_G0017573.1 mouse_genomes_project 11 47197584 47201905 + protein_coding retained_intron MGP_WSBEiJ_T0003191.1 MGP_WSBEiJ_G0002957.1 mouse_genomes_project 11 96477209 96491240 + Dlx4os antisense antisense MGP_WSBEiJ_T0029746.1 MGP_WSBEiJ_G0018009.1 mouse_genomes_project 11 72960721 72992786 + MGP_WSBEiJ_P0029746 Atp2a3 protein_coding protein_coding MGP_WSBEiJ_T0029747.1 MGP_WSBEiJ_G0018009.1 mouse_genomes_project 11 72960721 72992787 + MGP_WSBEiJ_P0029747 Atp2a3 protein_coding protein_coding MGP_WSBEiJ_T0029748.1 MGP_WSBEiJ_G0018009.1 mouse_genomes_project 11 72960842 72970297 + Atp2a3 protein_coding retained_intron MGP_WSBEiJ_T0029749.1 MGP_WSBEiJ_G0018009.1 mouse_genomes_project 11 72960906 72992787 + MGP_WSBEiJ_P0029749 Atp2a3 protein_coding protein_coding MGP_WSBEiJ_T0029750.1 MGP_WSBEiJ_G0018009.1 mouse_genomes_project 11 72981805 72983254 + Atp2a3 protein_coding processed_transcript MGP_WSBEiJ_T0097738.1 MGP_WSBEiJ_G0036401.1 mouse_genomes_project 11 104569152 104569256 - Gm25337 snRNA snRNA MGP_WSBEiJ_T0027310.1 MGP_WSBEiJ_G0017409.1 mouse_genomes_project 11 6117881 6138434 + MGP_WSBEiJ_P0027310 Gm11992 protein_coding protein_coding MGP_WSBEiJ_T0031170.1 MGP_WSBEiJ_G0018376.1 mouse_genomes_project 11 98415037 98440401 - MGP_WSBEiJ_P0031170 Sp2 protein_coding protein_coding MGP_WSBEiJ_T0031171.1 MGP_WSBEiJ_G0018376.1 mouse_genomes_project 11 98415038 98440424 - MGP_WSBEiJ_P0031171 Sp2 protein_coding protein_coding MGP_WSBEiJ_T0031172.1 MGP_WSBEiJ_G0018376.1 mouse_genomes_project 11 98415170 98431377 - MGP_WSBEiJ_P0031172 Sp2 protein_coding protein_coding MGP_WSBEiJ_T0031173.1 MGP_WSBEiJ_G0018376.1 mouse_genomes_project 11 98415916 98445687 - MGP_WSBEiJ_P0031173 Sp2 protein_coding protein_coding MGP_WSBEiJ_T0028211.1 MGP_WSBEiJ_G0017641.1 mouse_genomes_project 11 50611188 50622112 + MGP_WSBEiJ_P0028211 Cdkn2aipnl protein_coding protein_coding MGP_WSBEiJ_T0028212.1 MGP_WSBEiJ_G0017641.1 mouse_genomes_project 11 50611419 50621022 + MGP_WSBEiJ_P0028212 Cdkn2aipnl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0016619.1 MGP_WSBEiJ_G0014602.1 mouse_genomes_project 11 75754636 75759742 - 4931413K12Rik processed_transcript processed_transcript MGP_WSBEiJ_T0006157.1 MGP_WSBEiJ_G0005145.1 mouse_genomes_project 11 61161910 61165120 - A530017D24Rik lincRNA lincRNA MGP_WSBEiJ_T0006158.1 MGP_WSBEiJ_G0005145.1 mouse_genomes_project 11 61162559 61165901 - A530017D24Rik lincRNA lincRNA MGP_WSBEiJ_T0016545.1 MGP_WSBEiJ_G0014564.1 mouse_genomes_project 11 269292 273991 + 8430429K09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016546.1 MGP_WSBEiJ_G0014564.1 mouse_genomes_project 11 269364 273855 + 8430429K09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016547.1 MGP_WSBEiJ_G0014564.1 mouse_genomes_project 11 269399 275230 + 8430429K09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016548.1 MGP_WSBEiJ_G0014564.1 mouse_genomes_project 11 269399 302145 + 8430429K09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016549.1 MGP_WSBEiJ_G0014564.1 mouse_genomes_project 11 269407 273908 + 8430429K09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0028574.1 MGP_WSBEiJ_G0017755.1 mouse_genomes_project 11 58419768 58466277 - MGP_WSBEiJ_P0028574 Wnt3a protein_coding protein_coding MGP_WSBEiJ_T0096764.1 MGP_WSBEiJ_G0035445.1 mouse_genomes_project 11 70359089 70359667 - pseudogene pseudogene MGP_WSBEiJ_T0031526.1 MGP_WSBEiJ_G0018504.1 mouse_genomes_project 11 102154877 102157467 + MGP_WSBEiJ_P0031526 Gast protein_coding protein_coding MGP_WSBEiJ_T0016668.1 MGP_WSBEiJ_G0014633.1 mouse_genomes_project 11 110130803 110132918 + Gm11650 processed_transcript processed_transcript MGP_WSBEiJ_T0030080.1 MGP_WSBEiJ_G0018106.1 mouse_genomes_project 11 77723166 77731264 + MGP_WSBEiJ_P0030080 Coro6 protein_coding protein_coding MGP_WSBEiJ_T0030081.1 MGP_WSBEiJ_G0018106.1 mouse_genomes_project 11 77723400 77724705 + MGP_WSBEiJ_P0030081 Coro6 protein_coding protein_coding MGP_WSBEiJ_T0030082.1 MGP_WSBEiJ_G0018106.1 mouse_genomes_project 11 77724586 77730387 + MGP_WSBEiJ_P0030082 Coro6 protein_coding protein_coding MGP_WSBEiJ_T0030083.1 MGP_WSBEiJ_G0018106.1 mouse_genomes_project 11 77724586 77730387 + MGP_WSBEiJ_P0030083 Coro6 protein_coding protein_coding MGP_WSBEiJ_T0030084.1 MGP_WSBEiJ_G0018106.1 mouse_genomes_project 11 77724661 77730287 + MGP_WSBEiJ_P0030084 Coro6 protein_coding protein_coding MGP_WSBEiJ_T0030085.1 MGP_WSBEiJ_G0018106.1 mouse_genomes_project 11 77724661 77730287 + MGP_WSBEiJ_P0030085 Coro6 protein_coding protein_coding MGP_WSBEiJ_T0031466.1 MGP_WSBEiJ_G0018454.1 mouse_genomes_project 11 101276323 101281991 - MGP_WSBEiJ_P0031466 Krt40 protein_coding protein_coding MGP_WSBEiJ_T0031467.1 MGP_WSBEiJ_G0018454.1 mouse_genomes_project 11 101276323 101281991 - MGP_WSBEiJ_P0031467 Krt40 protein_coding protein_coding MGP_WSBEiJ_T0011595.1 MGP_WSBEiJ_G0009750.1 mouse_genomes_project 11 58807122 58808382 + MGP_WSBEiJ_P0011595 Olfr225 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0012407.1 MGP_WSBEiJ_G0010537.1 mouse_genomes_project 11 76742572 76744256 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031470.1 MGP_WSBEiJ_G0018457.1 mouse_genomes_project 11 101300071 101300371 - MGP_WSBEiJ_P0031470 Gm11939 protein_coding protein_coding MGP_WSBEiJ_T0009592.1 MGP_WSBEiJ_G0007749.1 mouse_genomes_project 11 99259652 99259791 + Mir8102 miRNA miRNA MGP_WSBEiJ_T0033032.1 MGP_WSBEiJ_G0018816.1 mouse_genomes_project 11 121072282 121184277 - MGP_WSBEiJ_P0033032 Dnah17 protein_coding protein_coding MGP_WSBEiJ_T0033033.1 MGP_WSBEiJ_G0018816.1 mouse_genomes_project 11 121072282 121184277 - MGP_WSBEiJ_P0033033 Dnah17 protein_coding protein_coding MGP_WSBEiJ_T0033034.1 MGP_WSBEiJ_G0018816.1 mouse_genomes_project 11 121073622 121158356 - MGP_WSBEiJ_P0033034 Dnah17 protein_coding protein_coding MGP_WSBEiJ_T0033035.1 MGP_WSBEiJ_G0018816.1 mouse_genomes_project 11 121140109 121146462 - MGP_WSBEiJ_P0033035 Dnah17 protein_coding protein_coding MGP_WSBEiJ_T0033036.1 MGP_WSBEiJ_G0018816.1 mouse_genomes_project 11 121167306 121180768 - MGP_WSBEiJ_P0033036 Dnah17 protein_coding protein_coding MGP_WSBEiJ_T0031777.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103468969 103501889 + MGP_WSBEiJ_P0031777 Nbr1 protein_coding protein_coding MGP_WSBEiJ_T0031778.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103469057 103476371 + MGP_WSBEiJ_P0031778 Nbr1 protein_coding protein_coding MGP_WSBEiJ_T0031779.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103469681 103501890 + MGP_WSBEiJ_P0031779 Nbr1 protein_coding protein_coding MGP_WSBEiJ_T0031780.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103469681 103501890 + MGP_WSBEiJ_P0031780 Nbr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031781.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103469690 103488476 + Nbr1 protein_coding processed_transcript MGP_WSBEiJ_T0031782.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103469705 103501890 + MGP_WSBEiJ_P0031782 Nbr1 protein_coding protein_coding MGP_WSBEiJ_T0031783.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103469724 103476370 + MGP_WSBEiJ_P0031783 Nbr1 protein_coding protein_coding MGP_WSBEiJ_T0031784.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103472687 103476387 + MGP_WSBEiJ_P0031784 Nbr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031785.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103472993 103500952 + MGP_WSBEiJ_P0031785 Nbr1 protein_coding protein_coding MGP_WSBEiJ_T0031786.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103476343 103476406 + Nbr1 protein_coding misc_RNA MGP_WSBEiJ_T0031787.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103479726 103484365 + Nbr1 protein_coding retained_intron MGP_WSBEiJ_T0031788.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103484616 103488382 + Nbr1 protein_coding retained_intron MGP_WSBEiJ_T0031789.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103488229 103489339 + Nbr1 protein_coding retained_intron MGP_WSBEiJ_T0031790.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103488622 103489348 + Nbr1 protein_coding processed_transcript MGP_WSBEiJ_T0031791.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103492170 103495160 + Nbr1 protein_coding retained_intron MGP_WSBEiJ_T0031792.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103495050 103496575 + Nbr1 protein_coding retained_intron MGP_WSBEiJ_T0031793.1 MGP_WSBEiJ_G0018561.1 mouse_genomes_project 11 103497767 103500728 + Nbr1 protein_coding retained_intron MGP_WSBEiJ_T0033442.1 MGP_WSBEiJ_G0018897.1 mouse_genomes_project 11 124418535 124435293 + MGP_WSBEiJ_P0033442 Hexdc protein_coding protein_coding MGP_WSBEiJ_T0033443.1 MGP_WSBEiJ_G0018897.1 mouse_genomes_project 11 124418537 124435285 + MGP_WSBEiJ_P0033443 Hexdc protein_coding protein_coding MGP_WSBEiJ_T0033444.1 MGP_WSBEiJ_G0018897.1 mouse_genomes_project 11 124418874 124432530 + Hexdc protein_coding processed_transcript MGP_WSBEiJ_T0033445.1 MGP_WSBEiJ_G0018897.1 mouse_genomes_project 11 124418900 124428067 + Hexdc protein_coding processed_transcript MGP_WSBEiJ_T0033446.1 MGP_WSBEiJ_G0018897.1 mouse_genomes_project 11 124419912 124435285 + MGP_WSBEiJ_P0033446 Hexdc protein_coding protein_coding MGP_WSBEiJ_T0033447.1 MGP_WSBEiJ_G0018897.1 mouse_genomes_project 11 124424247 124433662 + MGP_WSBEiJ_P0033447 Hexdc protein_coding protein_coding MGP_WSBEiJ_T0028955.1 MGP_WSBEiJ_G0017836.1 mouse_genomes_project 11 64477649 64641356 - MGP_WSBEiJ_P0028955 Arhgap44 protein_coding protein_coding MGP_WSBEiJ_T0028956.1 MGP_WSBEiJ_G0017836.1 mouse_genomes_project 11 64477650 64641299 - MGP_WSBEiJ_P0028956 Arhgap44 protein_coding protein_coding MGP_WSBEiJ_T0028957.1 MGP_WSBEiJ_G0017836.1 mouse_genomes_project 11 64477651 64537303 - MGP_WSBEiJ_P0028957 Arhgap44 protein_coding protein_coding MGP_WSBEiJ_T0028958.1 MGP_WSBEiJ_G0017836.1 mouse_genomes_project 11 64528998 64640966 - MGP_WSBEiJ_P0028958 Arhgap44 protein_coding protein_coding MGP_WSBEiJ_T0028988.1 MGP_WSBEiJ_G0017845.1 mouse_genomes_project 11 66583540 66598177 - MGP_WSBEiJ_P0028988 Adprm protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028989.1 MGP_WSBEiJ_G0017845.1 mouse_genomes_project 11 66583676 66598153 - MGP_WSBEiJ_P0028989 Adprm protein_coding protein_coding MGP_WSBEiJ_T0028990.1 MGP_WSBEiJ_G0017845.1 mouse_genomes_project 11 66583904 66586163 - Adprm protein_coding processed_transcript MGP_WSBEiJ_T0028991.1 MGP_WSBEiJ_G0017845.1 mouse_genomes_project 11 66587331 66598168 - Adprm protein_coding processed_transcript MGP_WSBEiJ_T0028992.1 MGP_WSBEiJ_G0017845.1 mouse_genomes_project 11 66587372 66598174 - Adprm protein_coding processed_transcript MGP_WSBEiJ_T0028993.1 MGP_WSBEiJ_G0017845.1 mouse_genomes_project 11 66587517 66598172 - Adprm protein_coding processed_transcript MGP_WSBEiJ_T0000819.1 MGP_WSBEiJ_G0000758.1 mouse_genomes_project 11 84897778 84900092 + TEC TEC MGP_WSBEiJ_T0029219.1 MGP_WSBEiJ_G0017899.1 mouse_genomes_project 11 69311582 69313747 - Wrap53 protein_coding processed_transcript MGP_WSBEiJ_T0029220.1 MGP_WSBEiJ_G0017899.1 mouse_genomes_project 11 69311583 69329148 - MGP_WSBEiJ_P0029220 Wrap53 protein_coding protein_coding MGP_WSBEiJ_T0029221.1 MGP_WSBEiJ_G0017899.1 mouse_genomes_project 11 69327531 69330079 - MGP_WSBEiJ_P0029221 Wrap53 protein_coding protein_coding MGP_WSBEiJ_T0032759.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118849049 118883903 + MGP_WSBEiJ_P0032759 Itgb4 protein_coding protein_coding MGP_WSBEiJ_T0032760.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118849065 118883902 + MGP_WSBEiJ_P0032760 Itgb4 protein_coding protein_coding MGP_WSBEiJ_T0032761.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118849065 118883902 + MGP_WSBEiJ_P0032761 Itgb4 protein_coding protein_coding MGP_WSBEiJ_T0032762.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118849183 118868913 + Itgb4 protein_coding processed_transcript MGP_WSBEiJ_T0032763.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118849319 118883903 + MGP_WSBEiJ_P0032763 Itgb4 protein_coding protein_coding MGP_WSBEiJ_T0032764.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118852126 118883903 + MGP_WSBEiJ_P0032764 Itgb4 protein_coding protein_coding MGP_WSBEiJ_T0032765.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118852126 118883903 + MGP_WSBEiJ_P0032765 Itgb4 protein_coding protein_coding MGP_WSBEiJ_T0032766.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118864316 118865420 + Itgb4 protein_coding processed_transcript MGP_WSBEiJ_T0032767.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118865321 118866343 + Itgb4 protein_coding processed_transcript MGP_WSBEiJ_T0032768.1 MGP_WSBEiJ_G0018764.1 mouse_genomes_project 11 118867084 118868483 + Itgb4 protein_coding processed_transcript MGP_WSBEiJ_T0032769.1 MGP_WSBEiJ_G0018765.1 mouse_genomes_project 11 118883947 118888217 - MGP_WSBEiJ_P0032769 Galk1 protein_coding protein_coding MGP_WSBEiJ_T0030971.1 MGP_WSBEiJ_G0018321.1 mouse_genomes_project 11 95799910 95803989 + MGP_WSBEiJ_P0030971 Chad protein_coding protein_coding MGP_WSBEiJ_T0028017.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47685986 47704961 + MGP_WSBEiJ_P0028017 Mgat1 protein_coding protein_coding MGP_WSBEiJ_T0028018.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47686041 47704966 + MGP_WSBEiJ_P0028018 Mgat1 protein_coding protein_coding MGP_WSBEiJ_T0028019.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47686204 47687238 + Mgat1 protein_coding processed_transcript MGP_WSBEiJ_T0028020.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47686357 47687196 + Mgat1 protein_coding processed_transcript MGP_WSBEiJ_T0028021.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47687009 47702630 + Mgat1 protein_coding processed_transcript MGP_WSBEiJ_T0028022.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47689264 47704934 + MGP_WSBEiJ_P0028022 Mgat1 protein_coding protein_coding MGP_WSBEiJ_T0028023.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47689270 47702761 + Mgat1 protein_coding processed_transcript MGP_WSBEiJ_T0028024.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47690745 47693412 + Mgat1 protein_coding processed_transcript MGP_WSBEiJ_T0028025.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47692287 47704969 + MGP_WSBEiJ_P0028025 Mgat1 protein_coding protein_coding MGP_WSBEiJ_T0028026.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47692340 47699914 + Mgat1 protein_coding processed_transcript MGP_WSBEiJ_T0028027.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47692347 47702630 + Mgat1 protein_coding processed_transcript MGP_WSBEiJ_T0028028.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47692365 47703230 + MGP_WSBEiJ_P0028028 Mgat1 protein_coding protein_coding MGP_WSBEiJ_T0028029.1 MGP_WSBEiJ_G0017590.1 mouse_genomes_project 11 47698022 47699776 + Mgat1 protein_coding processed_transcript MGP_WSBEiJ_T0027426.1 MGP_WSBEiJ_G0017436.1 mouse_genomes_project 11 17578487 17608935 - MGP_WSBEiJ_P0027426 Slc1a4 protein_coding protein_coding MGP_WSBEiJ_T0031230.1 MGP_WSBEiJ_G0018391.1 mouse_genomes_project 11 99006356 99074593 - MGP_WSBEiJ_P0031230 Srcin1 protein_coding protein_coding MGP_WSBEiJ_T0031231.1 MGP_WSBEiJ_G0018391.1 mouse_genomes_project 11 99006359 99074670 - MGP_WSBEiJ_P0031231 Srcin1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0031232.1 MGP_WSBEiJ_G0018391.1 mouse_genomes_project 11 99009849 99073431 - MGP_WSBEiJ_P0031232 Srcin1 protein_coding protein_coding MGP_WSBEiJ_T0031233.1 MGP_WSBEiJ_G0018391.1 mouse_genomes_project 11 99014653 99073322 - MGP_WSBEiJ_P0031233 Srcin1 protein_coding protein_coding MGP_WSBEiJ_T0031234.1 MGP_WSBEiJ_G0018391.1 mouse_genomes_project 11 99031869 99073307 - MGP_WSBEiJ_P0031234 Srcin1 protein_coding protein_coding MGP_WSBEiJ_T0031235.1 MGP_WSBEiJ_G0018391.1 mouse_genomes_project 11 99049313 99074610 - Srcin1 protein_coding processed_transcript MGP_WSBEiJ_T0100219.1 MGP_WSBEiJ_G0038771.1 mouse_genomes_project 11 73555049 73555985 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100220.1 MGP_WSBEiJ_G0038771.1 mouse_genomes_project 11 73555251 73556002 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0096918.1 MGP_WSBEiJ_G0035599.1 mouse_genomes_project 11 87232231 87232351 + Gm23667 rRNA rRNA MGP_WSBEiJ_T0028831.1 MGP_WSBEiJ_G0017810.1 mouse_genomes_project 11 61165590 61228012 - MGP_WSBEiJ_P0028831 Akap10 protein_coding protein_coding MGP_WSBEiJ_T0028832.1 MGP_WSBEiJ_G0017810.1 mouse_genomes_project 11 61169109 61228254 - MGP_WSBEiJ_P0028832 Akap10 protein_coding protein_coding MGP_WSBEiJ_T0028833.1 MGP_WSBEiJ_G0017810.1 mouse_genomes_project 11 61169473 61176140 - Akap10 protein_coding processed_transcript MGP_WSBEiJ_T0028834.1 MGP_WSBEiJ_G0017810.1 mouse_genomes_project 11 61189421 61228228 - MGP_WSBEiJ_P0028834 Akap10 protein_coding protein_coding MGP_WSBEiJ_T0028835.1 MGP_WSBEiJ_G0017810.1 mouse_genomes_project 11 61219873 61228209 - Akap10 protein_coding processed_transcript MGP_WSBEiJ_T0006144.1 MGP_WSBEiJ_G0005133.1 mouse_genomes_project 11 49678219 49688151 + 9230009I02Rik lincRNA lincRNA MGP_WSBEiJ_T0031051.1 MGP_WSBEiJ_G0018344.1 mouse_genomes_project 11 97026247 97046112 + MGP_WSBEiJ_P0031051 Phb protein_coding protein_coding MGP_WSBEiJ_T0031052.1 MGP_WSBEiJ_G0018344.1 mouse_genomes_project 11 97026317 97032856 + Phb protein_coding processed_transcript MGP_WSBEiJ_T0031053.1 MGP_WSBEiJ_G0018344.1 mouse_genomes_project 11 97026327 97029819 + Phb protein_coding processed_transcript MGP_WSBEiJ_T0031054.1 MGP_WSBEiJ_G0018344.1 mouse_genomes_project 11 97026381 97045047 + MGP_WSBEiJ_P0031054 Phb protein_coding protein_coding MGP_WSBEiJ_T0031055.1 MGP_WSBEiJ_G0018344.1 mouse_genomes_project 11 97032663 97040569 + Phb protein_coding processed_transcript MGP_WSBEiJ_T0031868.1 MGP_WSBEiJ_G0018579.1 mouse_genomes_project 11 104175620 104180071 + MGP_WSBEiJ_P0031868 G6pc3 protein_coding protein_coding MGP_WSBEiJ_T0031869.1 MGP_WSBEiJ_G0018579.1 mouse_genomes_project 11 104175669 104180071 + MGP_WSBEiJ_P0031869 G6pc3 protein_coding protein_coding MGP_WSBEiJ_T0031870.1 MGP_WSBEiJ_G0018579.1 mouse_genomes_project 11 104175755 104178131 + G6pc3 protein_coding processed_transcript MGP_WSBEiJ_T0031871.1 MGP_WSBEiJ_G0018579.1 mouse_genomes_project 11 104175826 104179190 + G6pc3 protein_coding processed_transcript MGP_WSBEiJ_T0031872.1 MGP_WSBEiJ_G0018579.1 mouse_genomes_project 11 104177798 104179642 + G6pc3 protein_coding processed_transcript MGP_WSBEiJ_T0031873.1 MGP_WSBEiJ_G0018579.1 mouse_genomes_project 11 104178008 104179588 + G6pc3 protein_coding processed_transcript MGP_WSBEiJ_T0031874.1 MGP_WSBEiJ_G0018579.1 mouse_genomes_project 11 104178014 104179741 + G6pc3 protein_coding processed_transcript MGP_WSBEiJ_T0030416.1 MGP_WSBEiJ_G0018184.1 mouse_genomes_project 11 82636652 82643293 + MGP_WSBEiJ_P0030416 Ccl11 protein_coding protein_coding MGP_WSBEiJ_T0032554.1 MGP_WSBEiJ_G0018727.1 mouse_genomes_project 11 117892100 117949865 + Rab37 protein_coding retained_intron MGP_WSBEiJ_T0032555.1 MGP_WSBEiJ_G0018727.1 mouse_genomes_project 11 117892100 117964243 + MGP_WSBEiJ_P0032555 Rab37 protein_coding protein_coding MGP_WSBEiJ_T0032564.1 MGP_WSBEiJ_G0018727.1 mouse_genomes_project 11 117956164 117964243 + MGP_WSBEiJ_P0032564 Rab37 protein_coding protein_coding MGP_WSBEiJ_T0032565.1 MGP_WSBEiJ_G0018727.1 mouse_genomes_project 11 117956210 117959556 + Rab37 protein_coding retained_intron MGP_WSBEiJ_T0006210.1 MGP_WSBEiJ_G0005183.1 mouse_genomes_project 11 87910861 87911563 - Gm11479 lincRNA lincRNA MGP_WSBEiJ_T0030950.1 MGP_WSBEiJ_G0018316.1 mouse_genomes_project 11 95704483 95710662 - Spata20 protein_coding processed_transcript MGP_WSBEiJ_T0030951.1 MGP_WSBEiJ_G0018316.1 mouse_genomes_project 11 95704483 95710909 - MGP_WSBEiJ_P0030951 Spata20 protein_coding protein_coding MGP_WSBEiJ_T0030952.1 MGP_WSBEiJ_G0018316.1 mouse_genomes_project 11 95708650 95709973 - Spata20 protein_coding processed_transcript MGP_WSBEiJ_T0030953.1 MGP_WSBEiJ_G0018316.1 mouse_genomes_project 11 95708913 95710660 - Spata20 protein_coding processed_transcript MGP_WSBEiJ_T0030954.1 MGP_WSBEiJ_G0018316.1 mouse_genomes_project 11 95710168 95711734 - Spata20 protein_coding processed_transcript MGP_WSBEiJ_T0012237.1 MGP_WSBEiJ_G0010367.1 mouse_genomes_project 11 13594004 13595071 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033106.1 MGP_WSBEiJ_G0018832.1 mouse_genomes_project 11 122368256 122387383 + MGP_WSBEiJ_P0033106 Gaa protein_coding protein_coding MGP_WSBEiJ_T0033107.1 MGP_WSBEiJ_G0018832.1 mouse_genomes_project 11 122368395 122387383 + MGP_WSBEiJ_P0033107 Gaa protein_coding protein_coding MGP_WSBEiJ_T0033108.1 MGP_WSBEiJ_G0018832.1 mouse_genomes_project 11 122368397 122373822 + MGP_WSBEiJ_P0033108 Gaa protein_coding protein_coding MGP_WSBEiJ_T0033109.1 MGP_WSBEiJ_G0018832.1 mouse_genomes_project 11 122370885 122375509 + Gaa protein_coding processed_transcript MGP_WSBEiJ_T0033110.1 MGP_WSBEiJ_G0018832.1 mouse_genomes_project 11 122374937 122378747 + MGP_WSBEiJ_P0033110 Gaa protein_coding protein_coding MGP_WSBEiJ_T0033111.1 MGP_WSBEiJ_G0018832.1 mouse_genomes_project 11 122375225 122375984 + MGP_WSBEiJ_P0033111 Gaa protein_coding protein_coding MGP_WSBEiJ_T0033112.1 MGP_WSBEiJ_G0018832.1 mouse_genomes_project 11 122378130 122383471 + MGP_WSBEiJ_P0033112 Gaa protein_coding protein_coding MGP_WSBEiJ_T0033113.1 MGP_WSBEiJ_G0018832.1 mouse_genomes_project 11 122379300 122379915 + Gaa protein_coding processed_transcript MGP_WSBEiJ_T0016597.1 MGP_WSBEiJ_G0014591.1 mouse_genomes_project 11 58692901 58700878 + 4933439C10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016598.1 MGP_WSBEiJ_G0014591.1 mouse_genomes_project 11 58692924 58698306 + 4933439C10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016599.1 MGP_WSBEiJ_G0014591.1 mouse_genomes_project 11 58693333 58694089 + 4933439C10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016600.1 MGP_WSBEiJ_G0014591.1 mouse_genomes_project 11 58693389 58697339 + 4933439C10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016601.1 MGP_WSBEiJ_G0014591.1 mouse_genomes_project 11 58693904 58697391 + 4933439C10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016602.1 MGP_WSBEiJ_G0014591.1 mouse_genomes_project 11 58694877 58698306 + 4933439C10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0029405.1 MGP_WSBEiJ_G0017940.1 mouse_genomes_project 11 69795400 69800632 - MGP_WSBEiJ_P0029405 Acadvl protein_coding protein_coding MGP_WSBEiJ_T0029406.1 MGP_WSBEiJ_G0017940.1 mouse_genomes_project 11 69795406 69796129 - Acadvl protein_coding retained_intron MGP_WSBEiJ_T0029407.1 MGP_WSBEiJ_G0017940.1 mouse_genomes_project 11 69795461 69800611 - MGP_WSBEiJ_P0029407 Acadvl protein_coding protein_coding MGP_WSBEiJ_T0029408.1 MGP_WSBEiJ_G0017940.1 mouse_genomes_project 11 69796439 69797792 - Acadvl protein_coding retained_intron MGP_WSBEiJ_T0029409.1 MGP_WSBEiJ_G0017940.1 mouse_genomes_project 11 69798406 69800601 - Acadvl protein_coding retained_intron MGP_WSBEiJ_T0029410.1 MGP_WSBEiJ_G0017940.1 mouse_genomes_project 11 69799266 69800635 - Acadvl protein_coding retained_intron MGP_WSBEiJ_T0029411.1 MGP_WSBEiJ_G0017940.1 mouse_genomes_project 11 69799341 69800623 - Acadvl protein_coding retained_intron MGP_WSBEiJ_T0031671.1 MGP_WSBEiJ_G0018535.1 mouse_genomes_project 11 102968542 102996114 - Fam134c protein_coding processed_transcript MGP_WSBEiJ_T0031672.1 MGP_WSBEiJ_G0018535.1 mouse_genomes_project 11 102968733 102996114 - MGP_WSBEiJ_P0031672 Fam134c protein_coding protein_coding MGP_WSBEiJ_T0031673.1 MGP_WSBEiJ_G0018535.1 mouse_genomes_project 11 102968739 102995928 - MGP_WSBEiJ_P0031673 Fam134c protein_coding protein_coding MGP_WSBEiJ_T0031674.1 MGP_WSBEiJ_G0018535.1 mouse_genomes_project 11 102970220 102995986 - Fam134c protein_coding processed_transcript MGP_WSBEiJ_T0031675.1 MGP_WSBEiJ_G0018535.1 mouse_genomes_project 11 102970803 102996114 - Fam134c protein_coding processed_transcript MGP_WSBEiJ_T0096906.1 MGP_WSBEiJ_G0035587.1 mouse_genomes_project 11 8261224 8261354 + Gm23065 rRNA rRNA MGP_WSBEiJ_T0030258.1 MGP_WSBEiJ_G0018141.1 mouse_genomes_project 11 78823897 78848969 - MGP_WSBEiJ_P0030258 Sarm1 protein_coding protein_coding MGP_WSBEiJ_T0030259.1 MGP_WSBEiJ_G0018141.1 mouse_genomes_project 11 78824769 78835375 - Sarm1 protein_coding retained_intron MGP_WSBEiJ_T0030260.1 MGP_WSBEiJ_G0018141.1 mouse_genomes_project 11 78824847 78849263 - MGP_WSBEiJ_P0030260 Sarm1 protein_coding protein_coding MGP_WSBEiJ_T0030261.1 MGP_WSBEiJ_G0018141.1 mouse_genomes_project 11 78834403 78838862 - Sarm1 protein_coding retained_intron MGP_WSBEiJ_T0030262.1 MGP_WSBEiJ_G0018141.1 mouse_genomes_project 11 78842519 78849195 - Sarm1 protein_coding processed_transcript MGP_WSBEiJ_T0027979.1 MGP_WSBEiJ_G0017576.1 mouse_genomes_project 11 47419055 47419757 - MGP_WSBEiJ_P0027979 Psme2b protein_coding protein_coding MGP_WSBEiJ_T0028201.1 MGP_WSBEiJ_G0017638.1 mouse_genomes_project 11 50311399 50381291 - MGP_WSBEiJ_P0028201 Sec24a protein_coding protein_coding MGP_WSBEiJ_T0028202.1 MGP_WSBEiJ_G0017638.1 mouse_genomes_project 11 50313853 50380884 - MGP_WSBEiJ_P0028202 Sec24a protein_coding protein_coding MGP_WSBEiJ_T0028203.1 MGP_WSBEiJ_G0017638.1 mouse_genomes_project 11 50345290 50381104 - MGP_WSBEiJ_P0028203 Sec24a protein_coding protein_coding MGP_WSBEiJ_T0028204.1 MGP_WSBEiJ_G0017638.1 mouse_genomes_project 11 50345290 50381111 - MGP_WSBEiJ_P0028204 Sec24a protein_coding protein_coding MGP_WSBEiJ_T0028205.1 MGP_WSBEiJ_G0017638.1 mouse_genomes_project 11 50352592 50381834 - Sec24a protein_coding retained_intron MGP_WSBEiJ_T0028206.1 MGP_WSBEiJ_G0017638.1 mouse_genomes_project 11 50365234 50388188 - Sec24a protein_coding retained_intron MGP_WSBEiJ_T0027023.1 MGP_WSBEiJ_G0017342.1 mouse_genomes_project 11 931098 946033 + MGP_WSBEiJ_P0027023 Sec14l3 protein_coding protein_coding MGP_WSBEiJ_T0027024.1 MGP_WSBEiJ_G0017342.1 mouse_genomes_project 11 931148 937859 + Sec14l3 protein_coding retained_intron MGP_WSBEiJ_T0027025.1 MGP_WSBEiJ_G0017342.1 mouse_genomes_project 11 931209 944622 + Sec14l3 protein_coding processed_transcript MGP_WSBEiJ_T0027026.1 MGP_WSBEiJ_G0017342.1 mouse_genomes_project 11 931209 944622 + Sec14l3 protein_coding processed_transcript MGP_WSBEiJ_T0027027.1 MGP_WSBEiJ_G0017342.1 mouse_genomes_project 11 939819 945058 + Sec14l3 protein_coding processed_transcript MGP_WSBEiJ_T0098913.1 MGP_WSBEiJ_G0037576.1 mouse_genomes_project 11 43913307 43913439 + Gm22284 snoRNA snoRNA MGP_WSBEiJ_T0006098.1 MGP_WSBEiJ_G0005093.1 mouse_genomes_project 11 20097806 20101714 + Gm12056 lincRNA lincRNA MGP_WSBEiJ_T0029325.1 MGP_WSBEiJ_G0017926.1 mouse_genomes_project 11 69655447 69658583 - MGP_WSBEiJ_P0029325 Kctd11 protein_coding protein_coding MGP_WSBEiJ_T0027549.1 MGP_WSBEiJ_G0017463.1 mouse_genomes_project 11 21272146 21305411 - MGP_WSBEiJ_P0027549 Papolg protein_coding protein_coding MGP_WSBEiJ_T0027550.1 MGP_WSBEiJ_G0017463.1 mouse_genomes_project 11 21274746 21277967 - MGP_WSBEiJ_P0027550 Papolg protein_coding protein_coding MGP_WSBEiJ_T0027551.1 MGP_WSBEiJ_G0017463.1 mouse_genomes_project 11 21275914 21302067 - Papolg protein_coding processed_transcript MGP_WSBEiJ_T0027552.1 MGP_WSBEiJ_G0017463.1 mouse_genomes_project 11 21279550 21305394 - MGP_WSBEiJ_P0027552 Papolg protein_coding protein_coding MGP_WSBEiJ_T0012479.1 MGP_WSBEiJ_G0010609.1 mouse_genomes_project 11 107194300 107194989 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031595.1 MGP_WSBEiJ_G0018518.1 mouse_genomes_project 11 102528491 102539850 - MGP_WSBEiJ_P0031595 Dhx58 protein_coding protein_coding MGP_WSBEiJ_T0031596.1 MGP_WSBEiJ_G0018518.1 mouse_genomes_project 11 102528670 102530228 - Dhx58 protein_coding processed_transcript MGP_WSBEiJ_T0031597.1 MGP_WSBEiJ_G0018518.1 mouse_genomes_project 11 102528860 102534814 - Dhx58 protein_coding processed_transcript MGP_WSBEiJ_T0031598.1 MGP_WSBEiJ_G0018518.1 mouse_genomes_project 11 102536970 102539832 - Dhx58 protein_coding processed_transcript MGP_WSBEiJ_T0031599.1 MGP_WSBEiJ_G0018518.1 mouse_genomes_project 11 102537726 102538926 - Dhx58 protein_coding processed_transcript MGP_WSBEiJ_T0031600.1 MGP_WSBEiJ_G0018518.1 mouse_genomes_project 11 102538338 102539850 - Dhx58 protein_coding processed_transcript MGP_WSBEiJ_T0012355.1 MGP_WSBEiJ_G0010485.1 mouse_genomes_project 11 57175893 57177167 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012456.1 MGP_WSBEiJ_G0010586.1 mouse_genomes_project 11 98589193 98589313 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031501.1 MGP_WSBEiJ_G0018488.1 mouse_genomes_project 11 101780546 101781307 - MGP_WSBEiJ_P0031501 Krtap17-1 protein_coding protein_coding MGP_WSBEiJ_T0032065.1 MGP_WSBEiJ_G0018611.1 mouse_genomes_project 11 105193323 105199992 + MGP_WSBEiJ_P0032065 Hexim2 protein_coding protein_coding MGP_WSBEiJ_T0032066.1 MGP_WSBEiJ_G0018611.1 mouse_genomes_project 11 105194190 105200685 + MGP_WSBEiJ_P0032066 Hexim2 protein_coding protein_coding MGP_WSBEiJ_T0032067.1 MGP_WSBEiJ_G0018611.1 mouse_genomes_project 11 105194215 105200140 + MGP_WSBEiJ_P0032067 Hexim2 protein_coding protein_coding MGP_WSBEiJ_T0032068.1 MGP_WSBEiJ_G0018611.1 mouse_genomes_project 11 105194221 105201368 + MGP_WSBEiJ_P0032068 Hexim2 protein_coding protein_coding MGP_WSBEiJ_T0032069.1 MGP_WSBEiJ_G0018611.1 mouse_genomes_project 11 105194741 105199773 + MGP_WSBEiJ_P0032069 Hexim2 protein_coding protein_coding MGP_WSBEiJ_T0031459.1 MGP_WSBEiJ_G0018448.1 mouse_genomes_project 11 101099503 101110502 - MGP_WSBEiJ_P0031459 Krt28 protein_coding protein_coding MGP_WSBEiJ_T0031736.1 MGP_WSBEiJ_G0018548.1 mouse_genomes_project 11 103208251 103212045 + MGP_WSBEiJ_P0031736 Psme3 protein_coding protein_coding MGP_WSBEiJ_T0031737.1 MGP_WSBEiJ_G0018548.1 mouse_genomes_project 11 103208251 103215570 + MGP_WSBEiJ_P0031737 Psme3 protein_coding protein_coding MGP_WSBEiJ_T0031738.1 MGP_WSBEiJ_G0018548.1 mouse_genomes_project 11 103209015 103212631 + MGP_WSBEiJ_P0031738 Psme3 protein_coding protein_coding MGP_WSBEiJ_T0031739.1 MGP_WSBEiJ_G0018548.1 mouse_genomes_project 11 103209061 103212061 + Psme3 protein_coding processed_transcript MGP_WSBEiJ_T0031740.1 MGP_WSBEiJ_G0018548.1 mouse_genomes_project 11 103211870 103214132 + Psme3 protein_coding processed_transcript MGP_WSBEiJ_T0028817.1 MGP_WSBEiJ_G0017806.1 mouse_genomes_project 11 60959604 61007568 - Slc5a10 protein_coding processed_transcript MGP_WSBEiJ_T0028818.1 MGP_WSBEiJ_G0017806.1 mouse_genomes_project 11 60959605 61006688 - MGP_WSBEiJ_P0028818 Slc5a10 protein_coding protein_coding MGP_WSBEiJ_T0028819.1 MGP_WSBEiJ_G0017806.1 mouse_genomes_project 11 60959605 61007541 - MGP_WSBEiJ_P0028819 Slc5a10 protein_coding protein_coding MGP_WSBEiJ_T0028820.1 MGP_WSBEiJ_G0017806.1 mouse_genomes_project 11 60959615 61006739 - MGP_WSBEiJ_P0028820 Slc5a10 protein_coding protein_coding MGP_WSBEiJ_T0029305.1 MGP_WSBEiJ_G0017920.1 mouse_genomes_project 11 69591796 69593101 - MGP_WSBEiJ_P0029305 Spem1 protein_coding protein_coding MGP_WSBEiJ_T0003252.1 MGP_WSBEiJ_G0003008.1 mouse_genomes_project 11 110340022 110340635 + Gm11657 antisense antisense MGP_WSBEiJ_T0033467.1 MGP_WSBEiJ_G0018902.1 mouse_genomes_project 11 124575260 124607819 - MGP_WSBEiJ_P0033467 Rab40b protein_coding protein_coding MGP_WSBEiJ_T0033468.1 MGP_WSBEiJ_G0018902.1 mouse_genomes_project 11 124577143 124607633 - Rab40b protein_coding processed_transcript MGP_WSBEiJ_T0033469.1 MGP_WSBEiJ_G0018902.1 mouse_genomes_project 11 124578750 124607789 - Rab40b protein_coding processed_transcript MGP_WSBEiJ_T0033470.1 MGP_WSBEiJ_G0018902.1 mouse_genomes_project 11 124578769 124607798 - Rab40b protein_coding processed_transcript MGP_WSBEiJ_T0097682.1 MGP_WSBEiJ_G0036345.1 mouse_genomes_project 11 21191538 21191683 - Gm23827 snRNA snRNA MGP_WSBEiJ_T0032437.1 MGP_WSBEiJ_G0018697.1 mouse_genomes_project 11 112461966 112540437 - MGP_WSBEiJ_P0032437 Abca8a protein_coding protein_coding MGP_WSBEiJ_T0032438.1 MGP_WSBEiJ_G0018697.1 mouse_genomes_project 11 112461968 112540396 - MGP_WSBEiJ_P0032438 Abca8a protein_coding protein_coding MGP_WSBEiJ_T0032439.1 MGP_WSBEiJ_G0018697.1 mouse_genomes_project 11 112461968 112540396 - MGP_WSBEiJ_P0032439 Abca8a protein_coding protein_coding MGP_WSBEiJ_T0032440.1 MGP_WSBEiJ_G0018697.1 mouse_genomes_project 11 112463179 112466407 - Abca8a protein_coding processed_transcript MGP_WSBEiJ_T0032441.1 MGP_WSBEiJ_G0018697.1 mouse_genomes_project 11 112504446 112508789 - Abca8a protein_coding processed_transcript MGP_WSBEiJ_T0032442.1 MGP_WSBEiJ_G0018697.1 mouse_genomes_project 11 112513252 112514837 - Abca8a protein_coding processed_transcript MGP_WSBEiJ_T0032443.1 MGP_WSBEiJ_G0018697.1 mouse_genomes_project 11 112514770 112520090 - MGP_WSBEiJ_P0032443 Abca8a protein_coding protein_coding MGP_WSBEiJ_T0032444.1 MGP_WSBEiJ_G0018697.1 mouse_genomes_project 11 112528570 112540396 - MGP_WSBEiJ_P0032444 Abca8a protein_coding protein_coding MGP_WSBEiJ_T0028154.1 MGP_WSBEiJ_G0017627.1 mouse_genomes_project 11 49650577 49651390 + Zfp354a protein_coding processed_transcript MGP_WSBEiJ_T0028155.1 MGP_WSBEiJ_G0017627.1 mouse_genomes_project 11 49650633 49664852 + MGP_WSBEiJ_P0028155 Zfp354a protein_coding protein_coding MGP_WSBEiJ_T0028156.1 MGP_WSBEiJ_G0017627.1 mouse_genomes_project 11 49651133 49662786 + MGP_WSBEiJ_P0028156 Zfp354a protein_coding protein_coding MGP_WSBEiJ_T0028511.1 MGP_WSBEiJ_G0017727.1 mouse_genomes_project 11 57666005 57673791 - MGP_WSBEiJ_P0028511 2210407C18Rik protein_coding protein_coding MGP_WSBEiJ_T0028512.1 MGP_WSBEiJ_G0017727.1 mouse_genomes_project 11 57666010 57671213 - MGP_WSBEiJ_P0028512 2210407C18Rik protein_coding protein_coding MGP_WSBEiJ_T0028513.1 MGP_WSBEiJ_G0017727.1 mouse_genomes_project 11 57670022 57671206 - 2210407C18Rik protein_coding processed_transcript MGP_WSBEiJ_T0030045.1 MGP_WSBEiJ_G0018099.1 mouse_genomes_project 11 77019926 77084372 - MGP_WSBEiJ_P0030045 Cpd protein_coding protein_coding MGP_WSBEiJ_T0030046.1 MGP_WSBEiJ_G0018099.1 mouse_genomes_project 11 77027323 77032197 - Cpd protein_coding retained_intron MGP_WSBEiJ_T0030047.1 MGP_WSBEiJ_G0018099.1 mouse_genomes_project 11 77047798 77050889 - Cpd protein_coding retained_intron MGP_WSBEiJ_T0031095.1 MGP_WSBEiJ_G0018357.1 mouse_genomes_project 11 97514457 97559371 + MGP_WSBEiJ_P0031095 Ttll6 protein_coding protein_coding MGP_WSBEiJ_T0031096.1 MGP_WSBEiJ_G0018357.1 mouse_genomes_project 11 97525860 97559366 + MGP_WSBEiJ_P0031096 Ttll6 protein_coding protein_coding MGP_WSBEiJ_T0003131.1 MGP_WSBEiJ_G0002911.1 mouse_genomes_project 11 63405311 63409125 + 9630013K17Rik antisense antisense MGP_WSBEiJ_T0027102.1 MGP_WSBEiJ_G0017361.1 mouse_genomes_project 11 1810353 1848222 + MGP_WSBEiJ_P0027102 Thoc5 protein_coding protein_coding MGP_WSBEiJ_T0027103.1 MGP_WSBEiJ_G0017361.1 mouse_genomes_project 11 1810376 1848220 + MGP_WSBEiJ_P0027103 Thoc5 protein_coding protein_coding MGP_WSBEiJ_T0027104.1 MGP_WSBEiJ_G0017361.1 mouse_genomes_project 11 1818736 1820990 + Thoc5 protein_coding processed_transcript MGP_WSBEiJ_T0027105.1 MGP_WSBEiJ_G0017361.1 mouse_genomes_project 11 1818736 1832706 + Thoc5 protein_coding processed_transcript MGP_WSBEiJ_T0027106.1 MGP_WSBEiJ_G0017361.1 mouse_genomes_project 11 1818736 1837610 + MGP_WSBEiJ_P0027106 Thoc5 protein_coding protein_coding MGP_WSBEiJ_T0027107.1 MGP_WSBEiJ_G0017361.1 mouse_genomes_project 11 1834682 1839840 + Thoc5 protein_coding processed_transcript MGP_WSBEiJ_T0029324.1 MGP_WSBEiJ_G0017925.1 mouse_genomes_project 11 69653870 69655205 - MGP_WSBEiJ_P0029324 Tmem95 protein_coding protein_coding MGP_WSBEiJ_T0027777.1 MGP_WSBEiJ_G0017518.1 mouse_genomes_project 11 32071746 32075507 - MGP_WSBEiJ_P0027777 Foxi1 protein_coding protein_coding MGP_WSBEiJ_T0027385.1 MGP_WSBEiJ_G0017423.1 mouse_genomes_project 11 14128477 14131551 + MGP_WSBEiJ_P0027385 Fbxo48 protein_coding protein_coding MGP_WSBEiJ_T0027386.1 MGP_WSBEiJ_G0017423.1 mouse_genomes_project 11 14128512 14131876 + MGP_WSBEiJ_P0027386 Fbxo48 protein_coding protein_coding MGP_WSBEiJ_T0009599.1 MGP_WSBEiJ_G0007756.1 mouse_genomes_project 11 102900861 102900931 + Mir6928 miRNA miRNA MGP_WSBEiJ_T0003199.1 MGP_WSBEiJ_G0002964.1 mouse_genomes_project 11 97694656 97711412 - Hoxb5os antisense antisense MGP_WSBEiJ_T0003200.1 MGP_WSBEiJ_G0002964.1 mouse_genomes_project 11 97697107 97709583 - Hoxb5os antisense antisense MGP_WSBEiJ_T0030867.1 MGP_WSBEiJ_G0018302.1 mouse_genomes_project 11 94218814 94220661 + Car10 protein_coding processed_transcript MGP_WSBEiJ_T0030868.1 MGP_WSBEiJ_G0018302.1 mouse_genomes_project 11 94219190 94655291 + MGP_WSBEiJ_P0030868 Car10 protein_coding protein_coding MGP_WSBEiJ_T0030869.1 MGP_WSBEiJ_G0018302.1 mouse_genomes_project 11 94219190 94523591 + MGP_WSBEiJ_P0030869 Car10 protein_coding protein_coding MGP_WSBEiJ_T0030870.1 MGP_WSBEiJ_G0018302.1 mouse_genomes_project 11 94219190 94771110 + MGP_WSBEiJ_P0030870 Car10 protein_coding protein_coding MGP_WSBEiJ_T0030871.1 MGP_WSBEiJ_G0018302.1 mouse_genomes_project 11 94219200 94770640 + MGP_WSBEiJ_P0030871 Car10 protein_coding protein_coding MGP_WSBEiJ_T0030872.1 MGP_WSBEiJ_G0018302.1 mouse_genomes_project 11 94220084 94771114 + MGP_WSBEiJ_P0030872 Car10 protein_coding protein_coding MGP_WSBEiJ_T0030873.1 MGP_WSBEiJ_G0018302.1 mouse_genomes_project 11 94220084 94320854 + MGP_WSBEiJ_P0030873 Car10 protein_coding protein_coding MGP_WSBEiJ_T0029285.1 MGP_WSBEiJ_G0017913.1 mouse_genomes_project 11 69500178 69528459 - MGP_WSBEiJ_P0029285 Polr2a protein_coding protein_coding MGP_WSBEiJ_T0029286.1 MGP_WSBEiJ_G0017913.1 mouse_genomes_project 11 69500591 69528045 - MGP_WSBEiJ_P0029286 Polr2a protein_coding protein_coding MGP_WSBEiJ_T0029287.1 MGP_WSBEiJ_G0017913.1 mouse_genomes_project 11 69502392 69503530 - Polr2a protein_coding processed_transcript MGP_WSBEiJ_T0029288.1 MGP_WSBEiJ_G0017913.1 mouse_genomes_project 11 69509327 69510260 - Polr2a protein_coding processed_transcript MGP_WSBEiJ_T0003190.1 MGP_WSBEiJ_G0002956.1 mouse_genomes_project 11 96356377 96361914 + Gm11513 antisense antisense MGP_WSBEiJ_T0012341.1 MGP_WSBEiJ_G0010471.1 mouse_genomes_project 11 52473418 52473771 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030622.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86119694 86277613 + MGP_WSBEiJ_P0030622 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030623.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86119700 86609654 + MGP_WSBEiJ_P0030623 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030624.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86119712 86140011 + MGP_WSBEiJ_P0030624 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030625.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86119739 86608945 + MGP_WSBEiJ_P0030625 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030626.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86119739 86608945 + MGP_WSBEiJ_P0030626 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030627.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86232495 86609653 + MGP_WSBEiJ_P0030627 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030628.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86237017 86263256 + MGP_WSBEiJ_P0030628 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030629.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86258830 86262177 + Bcas3 protein_coding processed_transcript MGP_WSBEiJ_T0030630.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86276248 86609653 + MGP_WSBEiJ_P0030630 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030631.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86276259 86609653 + MGP_WSBEiJ_P0030631 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030632.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86353652 86377361 + Bcas3 protein_coding processed_transcript MGP_WSBEiJ_T0030633.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86417150 86609650 + Bcas3 protein_coding processed_transcript MGP_WSBEiJ_T0030634.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86580866 86608985 + MGP_WSBEiJ_P0030634 Bcas3 protein_coding protein_coding MGP_WSBEiJ_T0030635.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86605007 86609241 + Bcas3 protein_coding processed_transcript MGP_WSBEiJ_T0030636.1 MGP_WSBEiJ_G0018242.1 mouse_genomes_project 11 86605560 86608902 + Bcas3 protein_coding processed_transcript MGP_WSBEiJ_T0012436.1 MGP_WSBEiJ_G0010566.1 mouse_genomes_project 11 88850625 88850798 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003096.1 MGP_WSBEiJ_G0002882.1 mouse_genomes_project 11 53989917 53993025 + Slc36a3os antisense antisense MGP_WSBEiJ_T0097677.1 MGP_WSBEiJ_G0036340.1 mouse_genomes_project 11 13899314 13899421 - Gm25698 snRNA snRNA MGP_WSBEiJ_T0098903.1 MGP_WSBEiJ_G0037566.1 mouse_genomes_project 11 18551148 18551287 - Gm23582 snoRNA snoRNA MGP_WSBEiJ_T0098961.1 MGP_WSBEiJ_G0037624.1 mouse_genomes_project 11 119598077 119598152 + Snord1b snoRNA snoRNA MGP_WSBEiJ_T0031655.1 MGP_WSBEiJ_G0018531.1 mouse_genomes_project 11 102950266 102952383 + MGP_WSBEiJ_P0031655 Hsd17b1 protein_coding protein_coding MGP_WSBEiJ_T0027930.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44724946 44728877 + MGP_WSBEiJ_P0027930 protein_coding protein_coding MGP_WSBEiJ_T0027931.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44724970 44728783 + MGP_WSBEiJ_P0027931 protein_coding protein_coding MGP_WSBEiJ_T0027932.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44724973 44729546 + MGP_WSBEiJ_P0027932 protein_coding protein_coding MGP_WSBEiJ_T0027933.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44724982 44730740 + MGP_WSBEiJ_P0027933 protein_coding protein_coding MGP_WSBEiJ_T0027934.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44724992 44729119 + MGP_WSBEiJ_P0027934 protein_coding protein_coding MGP_WSBEiJ_T0027935.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44724995 44730740 + MGP_WSBEiJ_P0027935 protein_coding protein_coding MGP_WSBEiJ_T0027936.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44724999 44729069 + MGP_WSBEiJ_P0027936 protein_coding protein_coding MGP_WSBEiJ_T0027937.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44725026 44727964 + protein_coding processed_transcript MGP_WSBEiJ_T0027938.1 MGP_WSBEiJ_G0017562.1 mouse_genomes_project 11 44727673 44728997 + MGP_WSBEiJ_P0027938 protein_coding protein_coding MGP_WSBEiJ_T0011096.1 MGP_WSBEiJ_G0009253.1 mouse_genomes_project 11 480710 480887 - Gm27624 misc_RNA misc_RNA MGP_WSBEiJ_T0031302.1 MGP_WSBEiJ_G0018408.1 mouse_genomes_project 11 99584354 99605751 - MGP_WSBEiJ_P0031302 Stac2 protein_coding protein_coding MGP_WSBEiJ_T0031303.1 MGP_WSBEiJ_G0018408.1 mouse_genomes_project 11 99587824 99592681 - MGP_WSBEiJ_P0031303 Stac2 protein_coding protein_coding MGP_WSBEiJ_T0003226.1 MGP_WSBEiJ_G0002984.1 mouse_genomes_project 11 103518142 103524615 - antisense antisense MGP_WSBEiJ_T0003125.1 MGP_WSBEiJ_G0002906.1 mouse_genomes_project 11 62137360 62140741 - antisense antisense MGP_WSBEiJ_T0033438.1 MGP_WSBEiJ_G0018894.1 mouse_genomes_project 11 124356983 124359160 + MGP_WSBEiJ_P0033438 Tex19.1 protein_coding protein_coding MGP_WSBEiJ_T0033439.1 MGP_WSBEiJ_G0018894.1 mouse_genomes_project 11 124356997 124357708 + MGP_WSBEiJ_P0033439 Tex19.1 protein_coding protein_coding MGP_WSBEiJ_T0029007.1 MGP_WSBEiJ_G0017851.1 mouse_genomes_project 11 66835317 66874101 + MGP_WSBEiJ_P0029007 protein_coding protein_coding MGP_WSBEiJ_T0029008.1 MGP_WSBEiJ_G0017851.1 mouse_genomes_project 11 66835611 66855506 + protein_coding retained_intron MGP_WSBEiJ_T0029009.1 MGP_WSBEiJ_G0017851.1 mouse_genomes_project 11 66835611 66842518 + MGP_WSBEiJ_P0029009 protein_coding protein_coding MGP_WSBEiJ_T0029010.1 MGP_WSBEiJ_G0017851.1 mouse_genomes_project 11 66838186 66852437 + protein_coding retained_intron MGP_WSBEiJ_T0100478.1 MGP_WSBEiJ_G0038937.1 mouse_genomes_project 11 73724840 73731811 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009607.1 MGP_WSBEiJ_G0007764.1 mouse_genomes_project 11 106559369 106559514 - miRNA miRNA MGP_WSBEiJ_T0027954.1 MGP_WSBEiJ_G0017570.1 mouse_genomes_project 11 45197400 45888014 - MGP_WSBEiJ_P0027954 Sgcd protein_coding protein_coding MGP_WSBEiJ_T0027955.1 MGP_WSBEiJ_G0017570.1 mouse_genomes_project 11 45282512 45699749 - MGP_WSBEiJ_P0027955 Sgcd protein_coding protein_coding MGP_WSBEiJ_T0027956.1 MGP_WSBEiJ_G0017570.1 mouse_genomes_project 11 45669395 45946067 - Sgcd protein_coding processed_transcript MGP_WSBEiJ_T0027957.1 MGP_WSBEiJ_G0017570.1 mouse_genomes_project 11 45887853 46307745 - Sgcd protein_coding processed_transcript MGP_WSBEiJ_T0032834.1 MGP_WSBEiJ_G0018777.1 mouse_genomes_project 11 119142193 119172414 - Srp68 protein_coding processed_transcript MGP_WSBEiJ_T0032835.1 MGP_WSBEiJ_G0018777.1 mouse_genomes_project 11 119142193 119172414 - MGP_WSBEiJ_P0032835 Srp68 protein_coding protein_coding MGP_WSBEiJ_T0032836.1 MGP_WSBEiJ_G0018777.1 mouse_genomes_project 11 119142193 119172332 - MGP_WSBEiJ_P0032836 Srp68 protein_coding protein_coding MGP_WSBEiJ_T0032837.1 MGP_WSBEiJ_G0018777.1 mouse_genomes_project 11 119145823 119158369 - Srp68 protein_coding processed_transcript MGP_WSBEiJ_T0100472.1 MGP_WSBEiJ_G0038931.1 mouse_genomes_project 11 57500104 57501044 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0029156.1 MGP_WSBEiJ_G0017883.1 mouse_genomes_project 11 68806894 68831349 + MGP_WSBEiJ_P0029156 Aloxe3 protein_coding protein_coding MGP_WSBEiJ_T0029157.1 MGP_WSBEiJ_G0017883.1 mouse_genomes_project 11 68807213 68816447 + Aloxe3 protein_coding retained_intron MGP_WSBEiJ_T0029158.1 MGP_WSBEiJ_G0017883.1 mouse_genomes_project 11 68807401 68815517 + MGP_WSBEiJ_P0029158 Aloxe3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029159.1 MGP_WSBEiJ_G0017883.1 mouse_genomes_project 11 68815134 68816099 + Aloxe3 protein_coding retained_intron MGP_WSBEiJ_T0029160.1 MGP_WSBEiJ_G0017883.1 mouse_genomes_project 11 68815309 68823762 + Aloxe3 protein_coding retained_intron MGP_WSBEiJ_T0029161.1 MGP_WSBEiJ_G0017883.1 mouse_genomes_project 11 68816478 68823840 + Aloxe3 protein_coding retained_intron MGP_WSBEiJ_T0003153.1 MGP_WSBEiJ_G0002928.1 mouse_genomes_project 11 75161558 75164440 - Gm12333 antisense antisense MGP_WSBEiJ_T0016645.1 MGP_WSBEiJ_G0014615.1 mouse_genomes_project 11 98372790 98415164 + D030028A08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016646.1 MGP_WSBEiJ_G0014615.1 mouse_genomes_project 11 98405868 98427772 + D030028A08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016647.1 MGP_WSBEiJ_G0014615.1 mouse_genomes_project 11 98405892 98422772 + D030028A08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016648.1 MGP_WSBEiJ_G0014615.1 mouse_genomes_project 11 98406015 98426607 + D030028A08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0006177.1 MGP_WSBEiJ_G0005161.1 mouse_genomes_project 11 71455252 71516600 + 9230020A06Rik lincRNA lincRNA MGP_WSBEiJ_T0006178.1 MGP_WSBEiJ_G0005161.1 mouse_genomes_project 11 71491106 71515893 + 9230020A06Rik lincRNA lincRNA MGP_WSBEiJ_T0030970.1 MGP_WSBEiJ_G0018320.1 mouse_genomes_project 11 95789712 95837500 - MGP_WSBEiJ_P0030970 Acsf2 protein_coding protein_coding MGP_WSBEiJ_T0030972.1 MGP_WSBEiJ_G0018320.1 mouse_genomes_project 11 95804168 95805636 - Acsf2 protein_coding processed_transcript MGP_WSBEiJ_T0030973.1 MGP_WSBEiJ_G0018320.1 mouse_genomes_project 11 95805148 95837398 - Acsf2 protein_coding processed_transcript MGP_WSBEiJ_T0028507.1 MGP_WSBEiJ_G0017724.1 mouse_genomes_project 11 57602381 57607620 - MGP_WSBEiJ_P0028507 protein_coding protein_coding MGP_WSBEiJ_T0028508.1 MGP_WSBEiJ_G0017724.1 mouse_genomes_project 11 57602381 57603314 - MGP_WSBEiJ_P0028508 protein_coding protein_coding MGP_WSBEiJ_T0012419.1 MGP_WSBEiJ_G0010549.1 mouse_genomes_project 11 80343740 80343887 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029644.1 MGP_WSBEiJ_G0017984.1 mouse_genomes_project 11 70861306 70873294 - MGP_WSBEiJ_P0029644 Derl2 protein_coding protein_coding MGP_WSBEiJ_T0029645.1 MGP_WSBEiJ_G0017984.1 mouse_genomes_project 11 70864464 70873288 - MGP_WSBEiJ_P0029645 Derl2 protein_coding protein_coding MGP_WSBEiJ_T0029646.1 MGP_WSBEiJ_G0017984.1 mouse_genomes_project 11 70864494 70873321 - MGP_WSBEiJ_P0029646 Derl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029647.1 MGP_WSBEiJ_G0017984.1 mouse_genomes_project 11 70866265 70873295 - Derl2 protein_coding retained_intron MGP_WSBEiJ_T0029648.1 MGP_WSBEiJ_G0017984.1 mouse_genomes_project 11 70867189 70873327 - MGP_WSBEiJ_P0029648 Derl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029649.1 MGP_WSBEiJ_G0017984.1 mouse_genomes_project 11 70868633 70873264 - MGP_WSBEiJ_P0029649 Derl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028632.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59177723 59178620 - Pemt protein_coding processed_transcript MGP_WSBEiJ_T0028633.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59177723 59246802 - MGP_WSBEiJ_P0028633 Pemt protein_coding protein_coding MGP_WSBEiJ_T0028634.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59177723 59256278 - MGP_WSBEiJ_P0028634 Pemt protein_coding protein_coding MGP_WSBEiJ_T0028635.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59177723 59256282 - MGP_WSBEiJ_P0028635 Pemt protein_coding protein_coding MGP_WSBEiJ_T0028636.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59177936 59246703 - Pemt protein_coding processed_transcript MGP_WSBEiJ_T0028637.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59177953 59241605 - MGP_WSBEiJ_P0028637 Pemt protein_coding protein_coding MGP_WSBEiJ_T0028638.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59181263 59256290 - MGP_WSBEiJ_P0028638 Pemt protein_coding protein_coding MGP_WSBEiJ_T0028639.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59183968 59229777 - Pemt protein_coding processed_transcript MGP_WSBEiJ_T0028640.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59183988 59190865 - Pemt protein_coding processed_transcript MGP_WSBEiJ_T0028641.1 MGP_WSBEiJ_G0017772.1 mouse_genomes_project 11 59254319 59256286 - Pemt protein_coding processed_transcript MGP_WSBEiJ_T0028339.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52901569 52915174 + MGP_WSBEiJ_P0028339 P4ha2 protein_coding protein_coding MGP_WSBEiJ_T0028340.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902398 52933618 + MGP_WSBEiJ_P0028340 P4ha2 protein_coding protein_coding MGP_WSBEiJ_T0028341.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902437 52929694 + P4ha2 protein_coding retained_intron MGP_WSBEiJ_T0028342.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902437 52933618 + MGP_WSBEiJ_P0028342 P4ha2 protein_coding protein_coding MGP_WSBEiJ_T0028343.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902449 52912605 + P4ha2 protein_coding retained_intron MGP_WSBEiJ_T0028344.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902449 52933628 + MGP_WSBEiJ_P0028344 P4ha2 protein_coding protein_coding MGP_WSBEiJ_T0028345.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902454 52911284 + MGP_WSBEiJ_P0028345 P4ha2 protein_coding protein_coding MGP_WSBEiJ_T0028346.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902465 52912533 + MGP_WSBEiJ_P0028346 P4ha2 protein_coding protein_coding MGP_WSBEiJ_T0028347.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902542 52912544 + MGP_WSBEiJ_P0028347 P4ha2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028348.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52902719 52912544 + MGP_WSBEiJ_P0028348 P4ha2 protein_coding protein_coding MGP_WSBEiJ_T0028349.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52908293 52915264 + MGP_WSBEiJ_P0028349 P4ha2 protein_coding protein_coding MGP_WSBEiJ_T0028350.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52911990 52921237 + MGP_WSBEiJ_P0028350 P4ha2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028351.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52914192 52915264 + P4ha2 protein_coding processed_transcript MGP_WSBEiJ_T0028352.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52926604 52927994 + P4ha2 protein_coding retained_intron MGP_WSBEiJ_T0028353.1 MGP_WSBEiJ_G0017675.1 mouse_genomes_project 11 52929624 52933631 + P4ha2 protein_coding retained_intron MGP_WSBEiJ_T0100489.1 MGP_WSBEiJ_G0038948.1 mouse_genomes_project 11 95843054 95844676 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0027912.1 MGP_WSBEiJ_G0017555.1 mouse_genomes_project 11 44251324 44289322 + MGP_WSBEiJ_P0027912 Sox30 protein_coding protein_coding MGP_WSBEiJ_T0030742.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88538057 88615476 + Rnf43 protein_coding retained_intron MGP_WSBEiJ_T0030743.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88538422 88601898 + Rnf43 protein_coding processed_transcript MGP_WSBEiJ_T0030744.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88538422 88621079 + MGP_WSBEiJ_P0030744 Rnf43 protein_coding protein_coding MGP_WSBEiJ_T0030745.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88539609 88621080 + MGP_WSBEiJ_P0030745 Rnf43 protein_coding protein_coding MGP_WSBEiJ_T0030746.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88539884 88620081 + MGP_WSBEiJ_P0030746 Rnf43 protein_coding protein_coding MGP_WSBEiJ_T0030747.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88539951 88619725 + MGP_WSBEiJ_P0030747 Rnf43 protein_coding protein_coding MGP_WSBEiJ_T0030748.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88610834 88616068 + Rnf43 protein_coding retained_intron MGP_WSBEiJ_T0030749.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88614915 88616654 + Rnf43 protein_coding retained_intron MGP_WSBEiJ_T0030750.1 MGP_WSBEiJ_G0018269.1 mouse_genomes_project 11 88619460 88620009 + Rnf43 protein_coding processed_transcript MGP_WSBEiJ_T0006251.1 MGP_WSBEiJ_G0005212.1 mouse_genomes_project 11 109829944 109847270 - C330019F10Rik lincRNA lincRNA MGP_WSBEiJ_T0031050.1 MGP_WSBEiJ_G0018343.1 mouse_genomes_project 11 96924666 96943613 - MGP_WSBEiJ_P0031050 Ngfr protein_coding protein_coding MGP_WSBEiJ_T0031585.1 MGP_WSBEiJ_G0018516.1 mouse_genomes_project 11 102450969 102458323 + MGP_WSBEiJ_P0031585 Nkiras2 protein_coding protein_coding MGP_WSBEiJ_T0031586.1 MGP_WSBEiJ_G0018516.1 mouse_genomes_project 11 102452008 102457940 + MGP_WSBEiJ_P0031586 Nkiras2 protein_coding protein_coding MGP_WSBEiJ_T0031587.1 MGP_WSBEiJ_G0018516.1 mouse_genomes_project 11 102454598 102459131 + MGP_WSBEiJ_P0031587 Nkiras2 protein_coding protein_coding MGP_WSBEiJ_T0031588.1 MGP_WSBEiJ_G0018516.1 mouse_genomes_project 11 102454642 102456402 + Nkiras2 protein_coding processed_transcript MGP_WSBEiJ_T0031589.1 MGP_WSBEiJ_G0018516.1 mouse_genomes_project 11 102454670 102458110 + Nkiras2 protein_coding processed_transcript MGP_WSBEiJ_T0031590.1 MGP_WSBEiJ_G0018516.1 mouse_genomes_project 11 102454733 102457641 + MGP_WSBEiJ_P0031590 Nkiras2 protein_coding protein_coding MGP_WSBEiJ_T0029986.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76248234 76386458 - MGP_WSBEiJ_P0029986 Vps53 protein_coding protein_coding MGP_WSBEiJ_T0029987.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76248304 76386435 - MGP_WSBEiJ_P0029987 Vps53 protein_coding protein_coding MGP_WSBEiJ_T0029988.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76248305 76386428 - MGP_WSBEiJ_P0029988 Vps53 protein_coding protein_coding MGP_WSBEiJ_T0029989.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76263855 76294720 - Vps53 protein_coding retained_intron MGP_WSBEiJ_T0029990.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76264794 76386310 - MGP_WSBEiJ_P0029990 Vps53 protein_coding protein_coding MGP_WSBEiJ_T0029991.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76264799 76386327 - MGP_WSBEiJ_P0029991 Vps53 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029992.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76264799 76386310 - MGP_WSBEiJ_P0029992 Vps53 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029993.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76319072 76386343 - MGP_WSBEiJ_P0029993 Vps53 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029994.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76319687 76373072 - MGP_WSBEiJ_P0029994 Vps53 protein_coding protein_coding MGP_WSBEiJ_T0029996.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76324591 76386398 - Vps53 protein_coding retained_intron MGP_WSBEiJ_T0029997.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76324707 76382676 - Vps53 protein_coding processed_transcript MGP_WSBEiJ_T0029998.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76324712 76343622 - Vps53 protein_coding processed_transcript MGP_WSBEiJ_T0029999.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76339372 76359725 - Vps53 protein_coding processed_transcript MGP_WSBEiJ_T0030000.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76341146 76386445 - MGP_WSBEiJ_P0030000 Vps53 protein_coding protein_coding MGP_WSBEiJ_T0030001.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76377403 76386423 - Vps53 protein_coding processed_transcript MGP_WSBEiJ_T0030002.1 MGP_WSBEiJ_G0018087.1 mouse_genomes_project 11 76383842 76386449 - MGP_WSBEiJ_P0030002 Vps53 protein_coding protein_coding MGP_WSBEiJ_T0029995.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76324137 76453646 - Glod4 protein_coding retained_intron MGP_WSBEiJ_T0030007.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76418546 76453634 - MGP_WSBEiJ_P0030007 Glod4 protein_coding protein_coding MGP_WSBEiJ_T0030011.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76429161 76453696 - MGP_WSBEiJ_P0030011 Glod4 protein_coding protein_coding MGP_WSBEiJ_T0030012.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76429258 76453622 - MGP_WSBEiJ_P0030012 Glod4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030013.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76429445 76453430 - MGP_WSBEiJ_P0030013 Glod4 protein_coding protein_coding MGP_WSBEiJ_T0030014.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76442835 76453581 - MGP_WSBEiJ_P0030014 Glod4 protein_coding protein_coding MGP_WSBEiJ_T0030015.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76443849 76449538 - Glod4 protein_coding retained_intron MGP_WSBEiJ_T0030016.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76444121 76453640 - MGP_WSBEiJ_P0030016 Glod4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030017.1 MGP_WSBEiJ_G0018088.1 mouse_genomes_project 11 76447677 76453609 - MGP_WSBEiJ_P0030017 Glod4 protein_coding protein_coding MGP_WSBEiJ_T0006220.1 MGP_WSBEiJ_G0005189.1 mouse_genomes_project 11 89721114 89724448 - Gm11493 lincRNA lincRNA MGP_WSBEiJ_T0006103.1 MGP_WSBEiJ_G0005098.1 mouse_genomes_project 11 21868186 22158740 + lincRNA lincRNA MGP_WSBEiJ_T0032035.1 MGP_WSBEiJ_G0018606.1 mouse_genomes_project 11 105050568 105075110 - MGP_WSBEiJ_P0032035 Dcakd protein_coding protein_coding MGP_WSBEiJ_T0032036.1 MGP_WSBEiJ_G0018606.1 mouse_genomes_project 11 105050570 105054070 - Dcakd protein_coding retained_intron MGP_WSBEiJ_T0032037.1 MGP_WSBEiJ_G0018606.1 mouse_genomes_project 11 105056166 105090167 - MGP_WSBEiJ_P0032037 Dcakd protein_coding protein_coding MGP_WSBEiJ_T0032038.1 MGP_WSBEiJ_G0018606.1 mouse_genomes_project 11 105088850 105090126 - Dcakd protein_coding retained_intron MGP_WSBEiJ_T0032039.1 MGP_WSBEiJ_G0018606.1 mouse_genomes_project 11 105089124 105090196 - Dcakd protein_coding processed_transcript MGP_WSBEiJ_T0030709.1 MGP_WSBEiJ_G0018263.1 mouse_genomes_project 11 88225376 88265096 - MGP_WSBEiJ_P0030709 Rad51c protein_coding protein_coding MGP_WSBEiJ_T0030710.1 MGP_WSBEiJ_G0018263.1 mouse_genomes_project 11 88227308 88265079 - MGP_WSBEiJ_P0030710 Rad51c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030711.1 MGP_WSBEiJ_G0018263.1 mouse_genomes_project 11 88227814 88265527 - MGP_WSBEiJ_P0030711 Rad51c protein_coding protein_coding MGP_WSBEiJ_T0030712.1 MGP_WSBEiJ_G0018263.1 mouse_genomes_project 11 88228101 88265004 - MGP_WSBEiJ_P0030712 Rad51c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030637.1 MGP_WSBEiJ_G0018243.1 mouse_genomes_project 11 86615982 86625380 + MGP_WSBEiJ_P0030637 Tbx2 protein_coding protein_coding MGP_WSBEiJ_T0031464.1 MGP_WSBEiJ_G0018453.1 mouse_genomes_project 11 101251377 101258595 - MGP_WSBEiJ_P0031464 Krt39 protein_coding protein_coding MGP_WSBEiJ_T0031465.1 MGP_WSBEiJ_G0018453.1 mouse_genomes_project 11 101251887 101258515 - MGP_WSBEiJ_P0031465 Krt39 protein_coding protein_coding MGP_WSBEiJ_T0028739.1 MGP_WSBEiJ_G0017793.1 mouse_genomes_project 11 60287437 60339629 + MGP_WSBEiJ_P0028739 Kcnj12 protein_coding protein_coding MGP_WSBEiJ_T0028740.1 MGP_WSBEiJ_G0017793.1 mouse_genomes_project 11 60334310 60339629 + MGP_WSBEiJ_P0028740 Kcnj12 protein_coding protein_coding MGP_WSBEiJ_T0028741.1 MGP_WSBEiJ_G0017793.1 mouse_genomes_project 11 60334310 60339625 + MGP_WSBEiJ_P0028741 Kcnj12 protein_coding protein_coding MGP_WSBEiJ_T0033222.1 MGP_WSBEiJ_G0018852.1 mouse_genomes_project 11 123537100 123546882 - Faap100 protein_coding retained_intron MGP_WSBEiJ_T0033223.1 MGP_WSBEiJ_G0018852.1 mouse_genomes_project 11 123537607 123546911 - MGP_WSBEiJ_P0033223 Faap100 protein_coding protein_coding MGP_WSBEiJ_T0033224.1 MGP_WSBEiJ_G0018852.1 mouse_genomes_project 11 123537926 123538934 - Faap100 protein_coding retained_intron MGP_WSBEiJ_T0033225.1 MGP_WSBEiJ_G0018852.1 mouse_genomes_project 11 123541012 123542209 - Faap100 protein_coding processed_transcript MGP_WSBEiJ_T0033226.1 MGP_WSBEiJ_G0018852.1 mouse_genomes_project 11 123541067 123546883 - Faap100 protein_coding retained_intron MGP_WSBEiJ_T0033227.1 MGP_WSBEiJ_G0018852.1 mouse_genomes_project 11 123544211 123546856 - Faap100 protein_coding processed_transcript MGP_WSBEiJ_T0033228.1 MGP_WSBEiJ_G0018852.1 mouse_genomes_project 11 123545027 123546530 - Faap100 protein_coding processed_transcript MGP_WSBEiJ_T0033229.1 MGP_WSBEiJ_G0018852.1 mouse_genomes_project 11 123545364 123546882 - Faap100 protein_coding processed_transcript MGP_WSBEiJ_T0030460.1 MGP_WSBEiJ_G0018196.1 mouse_genomes_project 11 83536514 83570085 + MGP_WSBEiJ_P0030460 Unc45b protein_coding protein_coding MGP_WSBEiJ_T0030461.1 MGP_WSBEiJ_G0018196.1 mouse_genomes_project 11 83537217 83570085 + MGP_WSBEiJ_P0030461 Unc45b protein_coding protein_coding MGP_WSBEiJ_T0030462.1 MGP_WSBEiJ_G0018196.1 mouse_genomes_project 11 83537217 83570085 + MGP_WSBEiJ_P0030462 Unc45b protein_coding protein_coding MGP_WSBEiJ_T0030463.1 MGP_WSBEiJ_G0018196.1 mouse_genomes_project 11 83554491 83555279 + Unc45b protein_coding processed_transcript MGP_WSBEiJ_T0030464.1 MGP_WSBEiJ_G0018196.1 mouse_genomes_project 11 83560330 83564439 + Unc45b protein_coding processed_transcript MGP_WSBEiJ_T0012504.1 MGP_WSBEiJ_G0010634.1 mouse_genomes_project 11 119287390 119287847 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097745.1 MGP_WSBEiJ_G0036408.1 mouse_genomes_project 11 118451107 118451214 + Gm25364 snRNA snRNA MGP_WSBEiJ_T0032110.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 105920126 106055729 - MGP_WSBEiJ_P0032110 Nsf protein_coding protein_coding MGP_WSBEiJ_T0032111.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 105921269 105925436 - Nsf protein_coding retained_intron MGP_WSBEiJ_T0032112.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 105921278 105922438 - Nsf protein_coding retained_intron MGP_WSBEiJ_T0032113.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 105945322 105973525 - Nsf protein_coding retained_intron MGP_WSBEiJ_T0032114.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 105960589 105973647 - Nsf protein_coding retained_intron MGP_WSBEiJ_T0032115.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 105981748 106055697 - Nsf protein_coding retained_intron MGP_WSBEiJ_T0032116.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 106010661 106055697 - Nsf protein_coding retained_intron MGP_WSBEiJ_T0032117.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 106011692 106039123 - MGP_WSBEiJ_P0032117 Nsf protein_coding protein_coding MGP_WSBEiJ_T0032118.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 106011796 106027549 - Nsf protein_coding retained_intron MGP_WSBEiJ_T0032119.1 MGP_WSBEiJ_G0018624.1 mouse_genomes_project 11 106027545 106039123 - MGP_WSBEiJ_P0032119 Nsf protein_coding protein_coding MGP_WSBEiJ_T0012257.1 MGP_WSBEiJ_G0010387.1 mouse_genomes_project 11 18398238 18398532 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032840.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119185106 119204061 - Exoc7 protein_coding processed_transcript MGP_WSBEiJ_T0032841.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119185106 119204061 - MGP_WSBEiJ_P0032841 Exoc7 protein_coding protein_coding MGP_WSBEiJ_T0032842.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119185106 119204061 - MGP_WSBEiJ_P0032842 Exoc7 protein_coding protein_coding MGP_WSBEiJ_T0032843.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119185106 119204061 - MGP_WSBEiJ_P0032843 Exoc7 protein_coding protein_coding MGP_WSBEiJ_T0032844.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119186168 119187582 - Exoc7 protein_coding processed_transcript MGP_WSBEiJ_T0032845.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119186214 119188570 - Exoc7 protein_coding processed_transcript MGP_WSBEiJ_T0032846.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119189671 119194883 - Exoc7 protein_coding processed_transcript MGP_WSBEiJ_T0032847.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119192796 119203979 - MGP_WSBEiJ_P0032847 Exoc7 protein_coding protein_coding MGP_WSBEiJ_T0032848.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119201948 119204054 - MGP_WSBEiJ_P0032848 Exoc7 protein_coding protein_coding MGP_WSBEiJ_T0032849.1 MGP_WSBEiJ_G0018779.1 mouse_genomes_project 11 119202364 119204559 - MGP_WSBEiJ_P0032849 Exoc7 protein_coding protein_coding MGP_WSBEiJ_T0012488.1 MGP_WSBEiJ_G0010618.1 mouse_genomes_project 11 110777640 110778125 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006246.1 MGP_WSBEiJ_G0005208.1 mouse_genomes_project 11 104650337 104654755 - 2810433D01Rik lincRNA lincRNA MGP_WSBEiJ_T0006247.1 MGP_WSBEiJ_G0005208.1 mouse_genomes_project 11 104651658 104654705 - 2810433D01Rik lincRNA lincRNA MGP_WSBEiJ_T0028427.1 MGP_WSBEiJ_G0017694.1 mouse_genomes_project 11 54266315 54292909 - MGP_WSBEiJ_P0028427 Sparc protein_coding protein_coding MGP_WSBEiJ_T0028428.1 MGP_WSBEiJ_G0017694.1 mouse_genomes_project 11 54266315 54293091 - MGP_WSBEiJ_P0028428 Sparc protein_coding protein_coding MGP_WSBEiJ_T0028429.1 MGP_WSBEiJ_G0017694.1 mouse_genomes_project 11 54267198 54271582 - Sparc protein_coding processed_transcript MGP_WSBEiJ_T0028430.1 MGP_WSBEiJ_G0017694.1 mouse_genomes_project 11 54267330 54274068 - Sparc protein_coding processed_transcript MGP_WSBEiJ_T0028431.1 MGP_WSBEiJ_G0017694.1 mouse_genomes_project 11 54271259 54292909 - MGP_WSBEiJ_P0028431 Sparc protein_coding protein_coding MGP_WSBEiJ_T0028432.1 MGP_WSBEiJ_G0017694.1 mouse_genomes_project 11 54281234 54292911 - Sparc protein_coding processed_transcript MGP_WSBEiJ_T0028445.1 MGP_WSBEiJ_G0017700.1 mouse_genomes_project 11 56424312 56458684 - MGP_WSBEiJ_P0028445 Fam114a2 protein_coding protein_coding MGP_WSBEiJ_T0028446.1 MGP_WSBEiJ_G0017700.1 mouse_genomes_project 11 56425126 56458670 - MGP_WSBEiJ_P0028446 Fam114a2 protein_coding protein_coding MGP_WSBEiJ_T0028447.1 MGP_WSBEiJ_G0017700.1 mouse_genomes_project 11 56445400 56447449 - Fam114a2 protein_coding processed_transcript MGP_WSBEiJ_T0028448.1 MGP_WSBEiJ_G0017700.1 mouse_genomes_project 11 56447395 56458669 - Fam114a2 protein_coding processed_transcript MGP_WSBEiJ_T0030144.1 MGP_WSBEiJ_G0018117.1 mouse_genomes_project 11 78181936 78196651 - MGP_WSBEiJ_P0030144 Pipox protein_coding protein_coding MGP_WSBEiJ_T0030145.1 MGP_WSBEiJ_G0018117.1 mouse_genomes_project 11 78182381 78184008 - Pipox protein_coding retained_intron MGP_WSBEiJ_T0030146.1 MGP_WSBEiJ_G0018117.1 mouse_genomes_project 11 78183940 78185861 - Pipox protein_coding processed_transcript MGP_WSBEiJ_T0098929.1 MGP_WSBEiJ_G0037592.1 mouse_genomes_project 11 69428015 69428158 - Gm24029 snoRNA snoRNA MGP_WSBEiJ_T0027848.1 MGP_WSBEiJ_G0017536.1 mouse_genomes_project 11 41145351 41146863 + MGP_WSBEiJ_P0027848 Gm9972 protein_coding protein_coding MGP_WSBEiJ_T0027794.1 MGP_WSBEiJ_G0017523.1 mouse_genomes_project 11 33683479 33705092 + MGP_WSBEiJ_P0027794 Pank3 protein_coding protein_coding MGP_WSBEiJ_T0030400.1 MGP_WSBEiJ_G0018175.1 mouse_genomes_project 11 80958785 80962967 + MGP_WSBEiJ_P0030400 Cdk5r1 protein_coding protein_coding MGP_WSBEiJ_T0030401.1 MGP_WSBEiJ_G0018175.1 mouse_genomes_project 11 80958818 80959686 + MGP_WSBEiJ_P0030401 Cdk5r1 protein_coding protein_coding MGP_WSBEiJ_T0029134.1 MGP_WSBEiJ_G0017877.1 mouse_genomes_project 11 68740903 68742765 + MGP_WSBEiJ_P0029134 Borcs6 protein_coding protein_coding MGP_WSBEiJ_T0016659.1 MGP_WSBEiJ_G0014625.1 mouse_genomes_project 11 102225252 102225997 + Gm12348 processed_transcript processed_transcript MGP_WSBEiJ_T0003073.1 MGP_WSBEiJ_G0002860.1 mouse_genomes_project 11 41352005 41354655 - Gm12144 antisense antisense MGP_WSBEiJ_T0096767.1 MGP_WSBEiJ_G0035448.1 mouse_genomes_project 11 123810949 123811448 - pseudogene pseudogene MGP_WSBEiJ_T0029200.1 MGP_WSBEiJ_G0017892.1 mouse_genomes_project 11 69103200 69108558 + MGP_WSBEiJ_P0029200 Gm17305 protein_coding protein_coding MGP_WSBEiJ_T0016550.1 MGP_WSBEiJ_G0014565.1 mouse_genomes_project 11 354370 360648 + Gm11946 processed_transcript processed_transcript MGP_WSBEiJ_T0016551.1 MGP_WSBEiJ_G0014565.1 mouse_genomes_project 11 355161 361070 + Gm11946 processed_transcript processed_transcript MGP_WSBEiJ_T0030838.1 MGP_WSBEiJ_G0018296.1 mouse_genomes_project 11 91239767 91301769 + Mmd protein_coding processed_transcript MGP_WSBEiJ_T0030839.1 MGP_WSBEiJ_G0018296.1 mouse_genomes_project 11 91239767 91304128 + Mmd protein_coding processed_transcript MGP_WSBEiJ_T0030840.1 MGP_WSBEiJ_G0018296.1 mouse_genomes_project 11 91239769 91280949 + Mmd protein_coding processed_transcript MGP_WSBEiJ_T0030841.1 MGP_WSBEiJ_G0018296.1 mouse_genomes_project 11 91302328 91321413 + MGP_WSBEiJ_P0030841 Mmd protein_coding protein_coding MGP_WSBEiJ_T0030842.1 MGP_WSBEiJ_G0018296.1 mouse_genomes_project 11 91302348 91332284 + MGP_WSBEiJ_P0030842 Mmd protein_coding protein_coding MGP_WSBEiJ_T0029818.1 MGP_WSBEiJ_G0018042.1 mouse_genomes_project 11 74050736 74059203 - MGP_WSBEiJ_P0029818 Olfr398 protein_coding protein_coding MGP_WSBEiJ_T0029819.1 MGP_WSBEiJ_G0018042.1 mouse_genomes_project 11 74050736 74051681 - MGP_WSBEiJ_P0029819 Olfr398 protein_coding protein_coding MGP_WSBEiJ_T0033163.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123096921 123165030 + MGP_WSBEiJ_P0033163 Baiap2 protein_coding protein_coding MGP_WSBEiJ_T0033164.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123096921 123160869 + MGP_WSBEiJ_P0033164 Baiap2 protein_coding protein_coding MGP_WSBEiJ_T0033165.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123096921 123165030 + MGP_WSBEiJ_P0033165 Baiap2 protein_coding protein_coding MGP_WSBEiJ_T0033166.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123096921 123160869 + MGP_WSBEiJ_P0033166 Baiap2 protein_coding protein_coding MGP_WSBEiJ_T0033167.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123096921 123160869 + MGP_WSBEiJ_P0033167 Baiap2 protein_coding protein_coding MGP_WSBEiJ_T0033168.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123097274 123114691 + Baiap2 protein_coding processed_transcript MGP_WSBEiJ_T0033169.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123097630 123137305 + Baiap2 protein_coding processed_transcript MGP_WSBEiJ_T0033170.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123114179 123114546 + Baiap2 protein_coding processed_transcript MGP_WSBEiJ_T0033171.1 MGP_WSBEiJ_G0018842.1 mouse_genomes_project 11 123155918 123160447 + Baiap2 protein_coding processed_transcript MGP_WSBEiJ_T0033331.1 MGP_WSBEiJ_G0018874.1 mouse_genomes_project 11 123830911 123833039 - MGP_WSBEiJ_P0033331 Myadml2 protein_coding protein_coding MGP_WSBEiJ_T0033332.1 MGP_WSBEiJ_G0018874.1 mouse_genomes_project 11 123830912 123831963 - Myadml2 protein_coding processed_transcript MGP_WSBEiJ_T0028913.1 MGP_WSBEiJ_G0017823.1 mouse_genomes_project 11 62133282 62133681 + MGP_WSBEiJ_P0028913 Gm10428 protein_coding protein_coding MGP_WSBEiJ_T0028782.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60766777 60772246 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028783.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60766777 60772276 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028784.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60766777 60772246 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028785.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60766777 60772276 - MGP_WSBEiJ_P0028785 Mapk7 protein_coding protein_coding MGP_WSBEiJ_T0028786.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60766777 60772246 - MGP_WSBEiJ_P0028786 Mapk7 protein_coding protein_coding MGP_WSBEiJ_T0028787.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60766777 60772276 - MGP_WSBEiJ_P0028787 Mapk7 protein_coding protein_coding MGP_WSBEiJ_T0028788.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60767424 60768916 - MGP_WSBEiJ_P0028788 Mapk7 protein_coding protein_coding MGP_WSBEiJ_T0028789.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60769279 60771689 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028790.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60769533 60772246 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028791.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60769555 60772246 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028792.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60769573 60772386 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028793.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60769583 60772246 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028794.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60769583 60772168 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0028795.1 MGP_WSBEiJ_G0017802.1 mouse_genomes_project 11 60769619 60772168 - Mapk7 protein_coding processed_transcript MGP_WSBEiJ_T0012218.1 MGP_WSBEiJ_G0010348.1 mouse_genomes_project 11 3431392 3431781 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003201.1 MGP_WSBEiJ_G0002965.1 mouse_genomes_project 11 97744275 97750140 - Gm11536 antisense antisense MGP_WSBEiJ_T0096905.1 MGP_WSBEiJ_G0035586.1 mouse_genomes_project 11 3242074 3242188 + n-R5s67 rRNA rRNA MGP_WSBEiJ_T0006179.1 MGP_WSBEiJ_G0005162.1 mouse_genomes_project 11 71594148 71605518 - Gm12324 lincRNA lincRNA MGP_WSBEiJ_T0012506.1 MGP_WSBEiJ_G0010636.1 mouse_genomes_project 11 119467341 119467575 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029468.1 MGP_WSBEiJ_G0017951.1 mouse_genomes_project 11 70035695 70037352 - MGP_WSBEiJ_P0029468 Gm21988 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029469.1 MGP_WSBEiJ_G0017951.1 mouse_genomes_project 11 70035695 70037414 - MGP_WSBEiJ_P0029469 Gm21988 protein_coding protein_coding MGP_WSBEiJ_T0029470.1 MGP_WSBEiJ_G0017951.1 mouse_genomes_project 11 70035698 70036630 - MGP_WSBEiJ_P0029470 Gm21988 protein_coding protein_coding MGP_WSBEiJ_T0003236.1 MGP_WSBEiJ_G0002994.1 mouse_genomes_project 11 105444843 105446282 + Arhgap27os1 antisense antisense MGP_WSBEiJ_T0030856.1 MGP_WSBEiJ_G0018299.1 mouse_genomes_project 11 91702687 91709018 + MGP_WSBEiJ_P0030856 Cox11 protein_coding protein_coding MGP_WSBEiJ_T0030857.1 MGP_WSBEiJ_G0018299.1 mouse_genomes_project 11 91702695 91709397 + MGP_WSBEiJ_P0030857 Cox11 protein_coding protein_coding MGP_WSBEiJ_T0032518.1 MGP_WSBEiJ_G0018716.1 mouse_genomes_project 11 117536184 117557111 + Kif19a protein_coding processed_transcript MGP_WSBEiJ_T0032519.1 MGP_WSBEiJ_G0018716.1 mouse_genomes_project 11 117536184 117557111 + Kif19a protein_coding processed_transcript MGP_WSBEiJ_T0032520.1 MGP_WSBEiJ_G0018716.1 mouse_genomes_project 11 117536184 117559072 + MGP_WSBEiJ_P0032520 Kif19a protein_coding protein_coding MGP_WSBEiJ_T0032521.1 MGP_WSBEiJ_G0018716.1 mouse_genomes_project 11 117536185 117561513 + MGP_WSBEiJ_P0032521 Kif19a protein_coding protein_coding MGP_WSBEiJ_T0032522.1 MGP_WSBEiJ_G0018716.1 mouse_genomes_project 11 117555581 117556499 + Kif19a protein_coding retained_intron MGP_WSBEiJ_T0032523.1 MGP_WSBEiJ_G0018716.1 mouse_genomes_project 11 117558839 117561679 + MGP_WSBEiJ_P0032523 Kif19a protein_coding protein_coding MGP_WSBEiJ_T0032524.1 MGP_WSBEiJ_G0018716.1 mouse_genomes_project 11 117558881 117560270 + Kif19a protein_coding retained_intron MGP_WSBEiJ_T0009543.1 MGP_WSBEiJ_G0007700.1 mouse_genomes_project 11 65223507 65223607 - Mir744 miRNA miRNA MGP_WSBEiJ_T0030442.1 MGP_WSBEiJ_G0018192.1 mouse_genomes_project 11 83421830 83494678 - MGP_WSBEiJ_P0030442 Rffl protein_coding protein_coding MGP_WSBEiJ_T0030443.1 MGP_WSBEiJ_G0018192.1 mouse_genomes_project 11 83424022 83466280 - MGP_WSBEiJ_P0030443 Rffl protein_coding protein_coding MGP_WSBEiJ_T0030444.1 MGP_WSBEiJ_G0018192.1 mouse_genomes_project 11 83425440 83449276 - MGP_WSBEiJ_P0030444 Rffl protein_coding protein_coding MGP_WSBEiJ_T0030445.1 MGP_WSBEiJ_G0018192.1 mouse_genomes_project 11 83430693 83466524 - MGP_WSBEiJ_P0030445 Rffl protein_coding protein_coding MGP_WSBEiJ_T0098895.1 MGP_WSBEiJ_G0037558.1 mouse_genomes_project 11 3634632 3634763 - Gm24313 snoRNA snoRNA MGP_WSBEiJ_T0029635.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70837266 70857760 - MGP_WSBEiJ_P0029635 Dhx33 protein_coding protein_coding MGP_WSBEiJ_T0029636.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70839685 70847181 - MGP_WSBEiJ_P0029636 Dhx33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029637.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70839925 70857743 - MGP_WSBEiJ_P0029637 Dhx33 protein_coding protein_coding MGP_WSBEiJ_T0029638.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70839925 70857663 - MGP_WSBEiJ_P0029638 Dhx33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029639.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70844915 70848389 - Dhx33 protein_coding retained_intron MGP_WSBEiJ_T0029640.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70845325 70849194 - MGP_WSBEiJ_P0029640 Dhx33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029641.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70846310 70847218 - Dhx33 protein_coding retained_intron MGP_WSBEiJ_T0029642.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70848416 70854130 - Dhx33 protein_coding processed_transcript MGP_WSBEiJ_T0029643.1 MGP_WSBEiJ_G0017983.1 mouse_genomes_project 11 70852326 70857760 - Dhx33 protein_coding retained_intron MGP_WSBEiJ_T0098933.1 MGP_WSBEiJ_G0037596.1 mouse_genomes_project 11 71803239 71803370 - Gm22927 snoRNA snoRNA MGP_WSBEiJ_T0012466.1 MGP_WSBEiJ_G0010596.1 mouse_genomes_project 11 103251011 103251231 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029863.1 MGP_WSBEiJ_G0018060.1 mouse_genomes_project 11 74969410 75013584 - MGP_WSBEiJ_P0029863 Sgsm2 protein_coding protein_coding MGP_WSBEiJ_T0029864.1 MGP_WSBEiJ_G0018060.1 mouse_genomes_project 11 74969415 75013584 - MGP_WSBEiJ_P0029864 Sgsm2 protein_coding protein_coding MGP_WSBEiJ_T0029865.1 MGP_WSBEiJ_G0018060.1 mouse_genomes_project 11 74976668 74980643 - Sgsm2 protein_coding retained_intron MGP_WSBEiJ_T0029866.1 MGP_WSBEiJ_G0018060.1 mouse_genomes_project 11 74987484 74989148 - Sgsm2 protein_coding retained_intron MGP_WSBEiJ_T0029867.1 MGP_WSBEiJ_G0018060.1 mouse_genomes_project 11 74987494 74988444 - Sgsm2 protein_coding retained_intron MGP_WSBEiJ_T0012359.1 MGP_WSBEiJ_G0010489.1 mouse_genomes_project 11 58086070 58086535 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011603.1 MGP_WSBEiJ_G0009757.1 mouse_genomes_project 11 119112543 119116317 + MGP_WSBEiJ_P0011603 Cdk3-ps polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011604.1 MGP_WSBEiJ_G0009757.1 mouse_genomes_project 11 119113026 119113725 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_WSBEiJ_T0011605.1 MGP_WSBEiJ_G0009757.1 mouse_genomes_project 11 119113080 119116828 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_WSBEiJ_T0006131.1 MGP_WSBEiJ_G0005121.1 mouse_genomes_project 11 41213332 41227314 - Gm12145 lincRNA lincRNA MGP_WSBEiJ_T0003234.1 MGP_WSBEiJ_G0002992.1 mouse_genomes_project 11 105424409 105429594 + Arhgap27os3 antisense antisense MGP_WSBEiJ_T0030877.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95055375 95119233 + MGP_WSBEiJ_P0030877 Mbtd1 protein_coding protein_coding MGP_WSBEiJ_T0030878.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95055389 95093023 + MGP_WSBEiJ_P0030878 Mbtd1 protein_coding protein_coding MGP_WSBEiJ_T0030879.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95055629 95093033 + Mbtd1 protein_coding processed_transcript MGP_WSBEiJ_T0030880.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95055730 95080463 + Mbtd1 protein_coding processed_transcript MGP_WSBEiJ_T0030881.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95055731 95081924 + Mbtd1 protein_coding processed_transcript MGP_WSBEiJ_T0030882.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95055740 95117565 + MGP_WSBEiJ_P0030882 Mbtd1 protein_coding protein_coding MGP_WSBEiJ_T0030883.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95055742 95119233 + MGP_WSBEiJ_P0030883 Mbtd1 protein_coding protein_coding MGP_WSBEiJ_T0030884.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95056404 95101962 + MGP_WSBEiJ_P0030884 Mbtd1 protein_coding protein_coding MGP_WSBEiJ_T0030885.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95076688 95106096 + MGP_WSBEiJ_P0030885 Mbtd1 protein_coding protein_coding MGP_WSBEiJ_T0030886.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95081508 95083970 + Mbtd1 protein_coding processed_transcript MGP_WSBEiJ_T0030887.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95083964 95104896 + Mbtd1 protein_coding processed_transcript MGP_WSBEiJ_T0030888.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95089303 95104178 + Mbtd1 protein_coding processed_transcript MGP_WSBEiJ_T0030889.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95094614 95098017 + Mbtd1 protein_coding processed_transcript MGP_WSBEiJ_T0030890.1 MGP_WSBEiJ_G0018304.1 mouse_genomes_project 11 95097237 95109493 + Mbtd1 protein_coding processed_transcript MGP_WSBEiJ_T0098963.1 MGP_WSBEiJ_G0037626.1 mouse_genomes_project 11 122892005 122892085 + Gm23663 snoRNA snoRNA MGP_WSBEiJ_T0027177.1 MGP_WSBEiJ_G0017375.1 mouse_genomes_project 11 2670404 2698595 - MGP_WSBEiJ_P0027177 Urgcp protein_coding protein_coding MGP_WSBEiJ_T0027178.1 MGP_WSBEiJ_G0017375.1 mouse_genomes_project 11 2672756 2698631 - MGP_WSBEiJ_P0027178 Urgcp protein_coding protein_coding MGP_WSBEiJ_T0031527.1 MGP_WSBEiJ_G0018505.1 mouse_genomes_project 11 102167799 102177104 - MGP_WSBEiJ_P0031527 Hap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0031528.1 MGP_WSBEiJ_G0018505.1 mouse_genomes_project 11 102167805 102176613 - MGP_WSBEiJ_P0031528 Hap1 protein_coding protein_coding MGP_WSBEiJ_T0031529.1 MGP_WSBEiJ_G0018505.1 mouse_genomes_project 11 102169775 102174524 - MGP_WSBEiJ_P0031529 Hap1 protein_coding protein_coding MGP_WSBEiJ_T0031530.1 MGP_WSBEiJ_G0018505.1 mouse_genomes_project 11 102169895 102172389 - MGP_WSBEiJ_P0031530 Hap1 protein_coding protein_coding MGP_WSBEiJ_T0031531.1 MGP_WSBEiJ_G0018505.1 mouse_genomes_project 11 102172739 102175867 - MGP_WSBEiJ_P0031531 Hap1 protein_coding protein_coding MGP_WSBEiJ_T0027677.1 MGP_WSBEiJ_G0017490.1 mouse_genomes_project 11 29072258 29085028 - MGP_WSBEiJ_P0027677 Stc2 protein_coding protein_coding MGP_WSBEiJ_T0027678.1 MGP_WSBEiJ_G0017490.1 mouse_genomes_project 11 29072943 29084057 - Stc2 protein_coding processed_transcript MGP_WSBEiJ_T0027679.1 MGP_WSBEiJ_G0017490.1 mouse_genomes_project 11 29080410 29083120 - Stc2 protein_coding processed_transcript MGP_WSBEiJ_T0027680.1 MGP_WSBEiJ_G0017490.1 mouse_genomes_project 11 29082952 29085001 - Stc2 protein_coding processed_transcript MGP_WSBEiJ_T0027681.1 MGP_WSBEiJ_G0017490.1 mouse_genomes_project 11 29082956 29084010 - Stc2 protein_coding processed_transcript MGP_WSBEiJ_T0003114.1 MGP_WSBEiJ_G0002896.1 mouse_genomes_project 11 59467211 59468332 + Gm12265 antisense antisense MGP_WSBEiJ_T0030897.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95171562 95224872 + Spag9 protein_coding processed_transcript MGP_WSBEiJ_T0030898.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95171574 95231905 + Spag9 protein_coding processed_transcript MGP_WSBEiJ_T0030899.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95171574 95312001 + MGP_WSBEiJ_P0030899 Spag9 protein_coding protein_coding MGP_WSBEiJ_T0030900.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95224813 95281535 + MGP_WSBEiJ_P0030900 Spag9 protein_coding protein_coding MGP_WSBEiJ_T0030901.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95225361 95290412 + MGP_WSBEiJ_P0030901 Spag9 protein_coding protein_coding MGP_WSBEiJ_T0030902.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95225433 95242463 + Spag9 protein_coding processed_transcript MGP_WSBEiJ_T0030903.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95225448 95311996 + MGP_WSBEiJ_P0030903 Spag9 protein_coding protein_coding MGP_WSBEiJ_T0030904.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95225448 95311996 + MGP_WSBEiJ_P0030904 Spag9 protein_coding protein_coding MGP_WSBEiJ_T0030905.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95225511 95312001 + MGP_WSBEiJ_P0030905 Spag9 protein_coding protein_coding MGP_WSBEiJ_T0030906.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95225608 95311999 + MGP_WSBEiJ_P0030906 Spag9 protein_coding protein_coding MGP_WSBEiJ_T0030907.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95253769 95277126 + Spag9 protein_coding processed_transcript MGP_WSBEiJ_T0030908.1 MGP_WSBEiJ_G0018308.1 mouse_genomes_project 11 95265688 95312001 + MGP_WSBEiJ_P0030908 Spag9 protein_coding protein_coding MGP_WSBEiJ_T0031075.1 MGP_WSBEiJ_G0018350.1 mouse_genomes_project 11 97241184 97302850 - MGP_WSBEiJ_P0031075 B4galnt2 protein_coding protein_coding MGP_WSBEiJ_T0012319.1 MGP_WSBEiJ_G0010449.1 mouse_genomes_project 11 41770589 41771770 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028094.1 MGP_WSBEiJ_G0017613.1 mouse_genomes_project 11 48827246 48858847 - MGP_WSBEiJ_P0028094 Canx protein_coding protein_coding MGP_WSBEiJ_T0028095.1 MGP_WSBEiJ_G0017613.1 mouse_genomes_project 11 48827752 48858847 - MGP_WSBEiJ_P0028095 Canx protein_coding protein_coding MGP_WSBEiJ_T0028096.1 MGP_WSBEiJ_G0017613.1 mouse_genomes_project 11 48829481 48832660 - Canx protein_coding processed_transcript MGP_WSBEiJ_T0028097.1 MGP_WSBEiJ_G0017613.1 mouse_genomes_project 11 48830646 48831602 - Canx protein_coding processed_transcript MGP_WSBEiJ_T0028098.1 MGP_WSBEiJ_G0017613.1 mouse_genomes_project 11 48832119 48834272 - Canx protein_coding processed_transcript MGP_WSBEiJ_T0028455.1 MGP_WSBEiJ_G0017703.1 mouse_genomes_project 11 56762567 56774139 + MGP_WSBEiJ_P0028455 Sap30l protein_coding protein_coding MGP_WSBEiJ_T0030656.1 MGP_WSBEiJ_G0018248.1 mouse_genomes_project 11 87087480 87178976 - MGP_WSBEiJ_P0030656 Med13 protein_coding protein_coding MGP_WSBEiJ_T0030657.1 MGP_WSBEiJ_G0018248.1 mouse_genomes_project 11 87092954 87099002 - Med13 protein_coding processed_transcript MGP_WSBEiJ_T0030658.1 MGP_WSBEiJ_G0018248.1 mouse_genomes_project 11 87095781 87099394 - Med13 protein_coding retained_intron MGP_WSBEiJ_T0030659.1 MGP_WSBEiJ_G0018248.1 mouse_genomes_project 11 87152456 87153634 - Med13 protein_coding retained_intron MGP_WSBEiJ_T0003048.1 MGP_WSBEiJ_G0002839.1 mouse_genomes_project 11 4215408 4218547 - antisense antisense MGP_WSBEiJ_T0032751.1 MGP_WSBEiJ_G0018762.1 mouse_genomes_project 11 118784926 118786752 + MGP_WSBEiJ_P0032751 Smim6 protein_coding protein_coding MGP_WSBEiJ_T0028926.1 MGP_WSBEiJ_G0017826.1 mouse_genomes_project 11 62236010 62269487 + MGP_WSBEiJ_P0028926 Fbxw10 protein_coding protein_coding MGP_WSBEiJ_T0028927.1 MGP_WSBEiJ_G0017826.1 mouse_genomes_project 11 62236064 62269484 + MGP_WSBEiJ_P0028927 Fbxw10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028928.1 MGP_WSBEiJ_G0017826.1 mouse_genomes_project 11 62236064 62269484 + MGP_WSBEiJ_P0028928 Fbxw10 protein_coding protein_coding MGP_WSBEiJ_T0028929.1 MGP_WSBEiJ_G0017826.1 mouse_genomes_project 11 62236069 62241169 + Fbxw10 protein_coding retained_intron MGP_WSBEiJ_T0028930.1 MGP_WSBEiJ_G0017826.1 mouse_genomes_project 11 62236073 62269465 + MGP_WSBEiJ_P0028930 Fbxw10 protein_coding protein_coding MGP_WSBEiJ_T0028931.1 MGP_WSBEiJ_G0017826.1 mouse_genomes_project 11 62266882 62268775 + Fbxw10 protein_coding processed_transcript MGP_WSBEiJ_T0027481.1 MGP_WSBEiJ_G0017450.1 mouse_genomes_project 11 20202162 20227368 - MGP_WSBEiJ_P0027481 B3gnt2 protein_coding protein_coding MGP_WSBEiJ_T0027482.1 MGP_WSBEiJ_G0017450.1 mouse_genomes_project 11 20202280 20227755 - MGP_WSBEiJ_P0027482 B3gnt2 protein_coding protein_coding MGP_WSBEiJ_T0027483.1 MGP_WSBEiJ_G0017450.1 mouse_genomes_project 11 20203998 20228219 - MGP_WSBEiJ_P0027483 B3gnt2 protein_coding protein_coding MGP_WSBEiJ_T0012503.1 MGP_WSBEiJ_G0010633.1 mouse_genomes_project 11 118591979 118592193 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009568.1 MGP_WSBEiJ_G0007725.1 mouse_genomes_project 11 77318564 77318673 - Mir423 miRNA miRNA MGP_WSBEiJ_T0030695.1 MGP_WSBEiJ_G0018256.1 mouse_genomes_project 11 87767907 87826209 - MGP_WSBEiJ_P0030695 Ypel2 protein_coding protein_coding MGP_WSBEiJ_T0012458.1 MGP_WSBEiJ_G0010588.1 mouse_genomes_project 11 99616160 99616316 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031021.1 MGP_WSBEiJ_G0018337.1 mouse_genomes_project 11 96598491 96606258 + MGP_WSBEiJ_P0031021 Tac4 protein_coding protein_coding MGP_WSBEiJ_T0030476.1 MGP_WSBEiJ_G0018204.1 mouse_genomes_project 11 83960889 83965305 - MGP_WSBEiJ_P0030476 Pex12 protein_coding protein_coding MGP_WSBEiJ_T0030477.1 MGP_WSBEiJ_G0018204.1 mouse_genomes_project 11 83961322 83965223 - MGP_WSBEiJ_P0030477 Pex12 protein_coding protein_coding MGP_WSBEiJ_T0030478.1 MGP_WSBEiJ_G0018204.1 mouse_genomes_project 11 83961322 83965270 - MGP_WSBEiJ_P0030478 Pex12 protein_coding protein_coding MGP_WSBEiJ_T0030479.1 MGP_WSBEiJ_G0018204.1 mouse_genomes_project 11 83961323 83965225 - MGP_WSBEiJ_P0030479 Pex12 protein_coding protein_coding MGP_WSBEiJ_T0030480.1 MGP_WSBEiJ_G0018204.1 mouse_genomes_project 11 83964148 83965266 - Pex12 protein_coding processed_transcript MGP_WSBEiJ_T0030481.1 MGP_WSBEiJ_G0018204.1 mouse_genomes_project 11 83964274 83968962 - MGP_WSBEiJ_P0030481 Pex12 protein_coding protein_coding MGP_WSBEiJ_T0030482.1 MGP_WSBEiJ_G0018204.1 mouse_genomes_project 11 83964573 83965286 - MGP_WSBEiJ_P0030482 Pex12 protein_coding protein_coding MGP_WSBEiJ_T0032641.1 MGP_WSBEiJ_G0018746.1 mouse_genomes_project 11 118316123 118317521 - MGP_WSBEiJ_P0032641 Nt5c protein_coding protein_coding MGP_WSBEiJ_T0032642.1 MGP_WSBEiJ_G0018746.1 mouse_genomes_project 11 118316123 118317568 - MGP_WSBEiJ_P0032642 Nt5c protein_coding protein_coding MGP_WSBEiJ_T0032643.1 MGP_WSBEiJ_G0018746.1 mouse_genomes_project 11 118316341 118317557 - Nt5c protein_coding retained_intron MGP_WSBEiJ_T0032644.1 MGP_WSBEiJ_G0018746.1 mouse_genomes_project 11 118316403 118316906 - Nt5c protein_coding retained_intron MGP_WSBEiJ_T0032645.1 MGP_WSBEiJ_G0018746.1 mouse_genomes_project 11 118316474 118317075 - Nt5c protein_coding retained_intron MGP_WSBEiJ_T0012215.1 MGP_WSBEiJ_G0010345.1 mouse_genomes_project 11 3150614 3150970 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027387.1 MGP_WSBEiJ_G0017424.1 mouse_genomes_project 11 14150914 14185869 - MGP_WSBEiJ_P0027387 Plek protein_coding protein_coding MGP_WSBEiJ_T0027388.1 MGP_WSBEiJ_G0017424.1 mouse_genomes_project 11 14171486 14180284 - MGP_WSBEiJ_P0027388 Plek protein_coding protein_coding MGP_WSBEiJ_T0032043.1 MGP_WSBEiJ_G0018608.1 mouse_genomes_project 11 105138247 105161707 - MGP_WSBEiJ_P0032043 Plcd3 protein_coding protein_coding MGP_WSBEiJ_T0032044.1 MGP_WSBEiJ_G0018608.1 mouse_genomes_project 11 105138247 105146269 - MGP_WSBEiJ_P0032044 Plcd3 protein_coding protein_coding MGP_WSBEiJ_T0032045.1 MGP_WSBEiJ_G0018608.1 mouse_genomes_project 11 105138529 105139695 - Plcd3 protein_coding processed_transcript MGP_WSBEiJ_T0032046.1 MGP_WSBEiJ_G0018608.1 mouse_genomes_project 11 105148536 105161667 - Plcd3 protein_coding processed_transcript MGP_WSBEiJ_T0032047.1 MGP_WSBEiJ_G0018608.1 mouse_genomes_project 11 105149712 105161640 - Plcd3 protein_coding processed_transcript MGP_WSBEiJ_T0033124.1 MGP_WSBEiJ_G0018835.1 mouse_genomes_project 11 122465300 122479552 - MGP_WSBEiJ_P0033124 Sgsh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033125.1 MGP_WSBEiJ_G0018835.1 mouse_genomes_project 11 122468115 122479580 - Sgsh protein_coding processed_transcript MGP_WSBEiJ_T0033126.1 MGP_WSBEiJ_G0018835.1 mouse_genomes_project 11 122468151 122479562 - MGP_WSBEiJ_P0033126 Sgsh protein_coding protein_coding MGP_WSBEiJ_T0033127.1 MGP_WSBEiJ_G0018835.1 mouse_genomes_project 11 122468291 122469715 - Sgsh protein_coding processed_transcript MGP_WSBEiJ_T0033128.1 MGP_WSBEiJ_G0018835.1 mouse_genomes_project 11 122468672 122476738 - Sgsh protein_coding processed_transcript MGP_WSBEiJ_T0030713.1 MGP_WSBEiJ_G0018264.1 mouse_genomes_project 11 88283435 88423732 + MGP_WSBEiJ_P0030713 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030714.1 MGP_WSBEiJ_G0018264.1 mouse_genomes_project 11 88288061 88348813 + MGP_WSBEiJ_P0030714 protein_coding protein_coding MGP_WSBEiJ_T0030715.1 MGP_WSBEiJ_G0018264.1 mouse_genomes_project 11 88404342 88422863 + MGP_WSBEiJ_P0030715 protein_coding protein_coding MGP_WSBEiJ_T0030716.1 MGP_WSBEiJ_G0018264.1 mouse_genomes_project 11 88406622 88423725 + MGP_WSBEiJ_P0030716 protein_coding protein_coding MGP_WSBEiJ_T0030717.1 MGP_WSBEiJ_G0018264.1 mouse_genomes_project 11 88410767 88423572 + protein_coding processed_transcript MGP_WSBEiJ_T0028482.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57315369 57323589 - MGP_WSBEiJ_P0028482 Zfp672 protein_coding protein_coding MGP_WSBEiJ_T0028483.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57315379 57323566 - MGP_WSBEiJ_P0028483 Zfp672 protein_coding protein_coding MGP_WSBEiJ_T0028484.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57315470 57323356 - MGP_WSBEiJ_P0028484 Zfp672 protein_coding protein_coding MGP_WSBEiJ_T0028485.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57317479 57330655 - MGP_WSBEiJ_P0028485 Zfp672 protein_coding protein_coding MGP_WSBEiJ_T0028486.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57317581 57320205 - MGP_WSBEiJ_P0028486 Zfp672 protein_coding protein_coding MGP_WSBEiJ_T0028487.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57319954 57323557 - Zfp672 protein_coding processed_transcript MGP_WSBEiJ_T0028488.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57319988 57323557 - Zfp672 protein_coding processed_transcript MGP_WSBEiJ_T0028489.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57327536 57330663 - Zfp672 protein_coding retained_intron MGP_WSBEiJ_T0028490.1 MGP_WSBEiJ_G0017713.1 mouse_genomes_project 11 57328041 57330663 - MGP_WSBEiJ_P0028490 Zfp672 protein_coding protein_coding MGP_WSBEiJ_T0031049.1 MGP_WSBEiJ_G0018342.1 mouse_genomes_project 11 96863524 96868247 - MGP_WSBEiJ_P0031049 Nxph3 protein_coding protein_coding MGP_WSBEiJ_T0006287.1 MGP_WSBEiJ_G0005240.1 mouse_genomes_project 11 122316139 122319456 + Gm11752 lincRNA lincRNA MGP_WSBEiJ_T0098925.1 MGP_WSBEiJ_G0037588.1 mouse_genomes_project 11 61967301 61967373 + Snord49a snoRNA snoRNA MGP_WSBEiJ_T0032108.1 MGP_WSBEiJ_G0018622.1 mouse_genomes_project 11 105822078 105844553 - MGP_WSBEiJ_P0032108 Wnt9b protein_coding protein_coding MGP_WSBEiJ_T0030358.1 MGP_WSBEiJ_G0018168.1 mouse_genomes_project 11 80607217 80631995 + MGP_WSBEiJ_P0030358 Adap2 protein_coding protein_coding MGP_WSBEiJ_T0030359.1 MGP_WSBEiJ_G0018168.1 mouse_genomes_project 11 80607228 80618919 + MGP_WSBEiJ_P0030359 Adap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030269.1 MGP_WSBEiJ_G0018144.1 mouse_genomes_project 11 78859963 78866673 - MGP_WSBEiJ_P0030269 Tmem199 protein_coding protein_coding MGP_WSBEiJ_T0030270.1 MGP_WSBEiJ_G0018144.1 mouse_genomes_project 11 78860160 78861727 - Tmem199 protein_coding retained_intron MGP_WSBEiJ_T0030271.1 MGP_WSBEiJ_G0018144.1 mouse_genomes_project 11 78861416 78866546 - Tmem199 protein_coding retained_intron MGP_WSBEiJ_T0030272.1 MGP_WSBEiJ_G0018144.1 mouse_genomes_project 11 78862369 78866584 - Tmem199 protein_coding retained_intron MGP_WSBEiJ_T0030446.1 MGP_WSBEiJ_G0018193.1 mouse_genomes_project 11 83500325 83514933 - MGP_WSBEiJ_P0030446 Rad51d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030447.1 MGP_WSBEiJ_G0018193.1 mouse_genomes_project 11 83500590 83514958 - MGP_WSBEiJ_P0030447 Rad51d protein_coding protein_coding MGP_WSBEiJ_T0030448.1 MGP_WSBEiJ_G0018193.1 mouse_genomes_project 11 83502624 83514933 - MGP_WSBEiJ_P0030448 Rad51d protein_coding protein_coding MGP_WSBEiJ_T0030449.1 MGP_WSBEiJ_G0018193.1 mouse_genomes_project 11 83502624 83514933 - MGP_WSBEiJ_P0030449 Rad51d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030450.1 MGP_WSBEiJ_G0018193.1 mouse_genomes_project 11 83502624 83514933 - MGP_WSBEiJ_P0030450 Rad51d protein_coding protein_coding MGP_WSBEiJ_T0030451.1 MGP_WSBEiJ_G0018193.1 mouse_genomes_project 11 83502624 83514933 - MGP_WSBEiJ_P0030451 Rad51d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012441.1 MGP_WSBEiJ_G0010571.1 mouse_genomes_project 11 91602027 91602783 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006277.1 MGP_WSBEiJ_G0005232.1 mouse_genomes_project 11 120048162 120050328 + Snhg20 lincRNA lincRNA MGP_WSBEiJ_T0006278.1 MGP_WSBEiJ_G0005232.1 mouse_genomes_project 11 120048162 120048830 + Snhg20 lincRNA lincRNA MGP_WSBEiJ_T0006279.1 MGP_WSBEiJ_G0005232.1 mouse_genomes_project 11 120048174 120050327 + Snhg20 lincRNA lincRNA MGP_WSBEiJ_T0028821.1 MGP_WSBEiJ_G0017807.1 mouse_genomes_project 11 60970878 60973646 + Fam83g protein_coding processed_transcript MGP_WSBEiJ_T0028822.1 MGP_WSBEiJ_G0017807.1 mouse_genomes_project 11 60970924 60994489 + MGP_WSBEiJ_P0028822 Fam83g protein_coding unknown_likely_coding MGP_WSBEiJ_T0003284.1 MGP_WSBEiJ_G0003032.1 mouse_genomes_project 11 122968168 122981749 - Rptoros antisense antisense MGP_WSBEiJ_T0027994.1 MGP_WSBEiJ_G0017584.1 mouse_genomes_project 11 47545292 47546273 - MGP_WSBEiJ_P0027994 protein_coding protein_coding MGP_WSBEiJ_T0028185.1 MGP_WSBEiJ_G0017632.1 mouse_genomes_project 11 50222160 50228910 - MGP_WSBEiJ_P0028185 Hnrnpab protein_coding protein_coding MGP_WSBEiJ_T0028186.1 MGP_WSBEiJ_G0017632.1 mouse_genomes_project 11 50222929 50228910 - MGP_WSBEiJ_P0028186 Hnrnpab protein_coding protein_coding MGP_WSBEiJ_T0028187.1 MGP_WSBEiJ_G0017632.1 mouse_genomes_project 11 50223234 50228910 - MGP_WSBEiJ_P0028187 Hnrnpab protein_coding protein_coding MGP_WSBEiJ_T0012216.1 MGP_WSBEiJ_G0010346.1 mouse_genomes_project 11 3213515 3213859 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006119.1 MGP_WSBEiJ_G0005109.1 mouse_genomes_project 11 29536311 29541867 + Gm12107 lincRNA lincRNA MGP_WSBEiJ_T0006243.1 MGP_WSBEiJ_G0005206.1 mouse_genomes_project 11 103534898 103535460 + lincRNA lincRNA MGP_WSBEiJ_T0006244.1 MGP_WSBEiJ_G0005206.1 mouse_genomes_project 11 103534984 103547200 + lincRNA lincRNA MGP_WSBEiJ_T0012433.1 MGP_WSBEiJ_G0010563.1 mouse_genomes_project 11 87915393 87915864 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029025.1 MGP_WSBEiJ_G0017855.1 mouse_genomes_project 11 67276346 67284363 + MGP_WSBEiJ_P0029025 Rcvrn protein_coding protein_coding MGP_WSBEiJ_T0031337.1 MGP_WSBEiJ_G0018415.1 mouse_genomes_project 11 99965967 99967110 + MGP_WSBEiJ_P0031337 Tcap protein_coding protein_coding MGP_WSBEiJ_T0012360.1 MGP_WSBEiJ_G0010490.1 mouse_genomes_project 11 58661551 58663033 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028698.1 MGP_WSBEiJ_G0017783.1 mouse_genomes_project 11 59944605 59963334 + MGP_WSBEiJ_P0028698 Llgl1 protein_coding protein_coding MGP_WSBEiJ_T0028699.1 MGP_WSBEiJ_G0017783.1 mouse_genomes_project 11 59944727 59963334 + MGP_WSBEiJ_P0028699 Llgl1 protein_coding protein_coding MGP_WSBEiJ_T0028700.1 MGP_WSBEiJ_G0017783.1 mouse_genomes_project 11 59953360 59955219 + Llgl1 protein_coding retained_intron MGP_WSBEiJ_T0029823.1 MGP_WSBEiJ_G0018044.1 mouse_genomes_project 11 74119851 74120854 - MGP_WSBEiJ_P0029823 Olfr399 protein_coding protein_coding MGP_WSBEiJ_T0012478.1 MGP_WSBEiJ_G0010608.1 mouse_genomes_project 11 107084867 107085456 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032543.1 MGP_WSBEiJ_G0018721.1 mouse_genomes_project 11 117709293 117721804 - MGP_WSBEiJ_P0032543 Cd300lb protein_coding protein_coding MGP_WSBEiJ_T0032544.1 MGP_WSBEiJ_G0018721.1 mouse_genomes_project 11 117709293 117721789 - MGP_WSBEiJ_P0032544 Cd300lb protein_coding protein_coding MGP_WSBEiJ_T0032545.1 MGP_WSBEiJ_G0018721.1 mouse_genomes_project 11 117715847 117721705 - Cd300lb protein_coding processed_transcript MGP_WSBEiJ_T0097684.1 MGP_WSBEiJ_G0036347.1 mouse_genomes_project 11 23830480 23830644 - Gm22868 snRNA snRNA MGP_WSBEiJ_T0032269.1 MGP_WSBEiJ_G0018662.1 mouse_genomes_project 11 108590188 108595282 - MGP_WSBEiJ_P0032269 Icam2 protein_coding protein_coding MGP_WSBEiJ_T0032270.1 MGP_WSBEiJ_G0018662.1 mouse_genomes_project 11 108591088 108593302 - MGP_WSBEiJ_P0032270 Icam2 protein_coding protein_coding MGP_WSBEiJ_T0032271.1 MGP_WSBEiJ_G0018662.1 mouse_genomes_project 11 108591334 108600584 - MGP_WSBEiJ_P0032271 Icam2 protein_coding protein_coding MGP_WSBEiJ_T0032272.1 MGP_WSBEiJ_G0018662.1 mouse_genomes_project 11 108593188 108600587 - MGP_WSBEiJ_P0032272 Icam2 protein_coding protein_coding MGP_WSBEiJ_T0032273.1 MGP_WSBEiJ_G0018662.1 mouse_genomes_project 11 108593545 108595497 - Icam2 protein_coding retained_intron MGP_WSBEiJ_T0006250.1 MGP_WSBEiJ_G0005211.1 mouse_genomes_project 11 109241487 109242519 - Gm11707 lincRNA lincRNA MGP_WSBEiJ_T0031559.1 MGP_WSBEiJ_G0018511.1 mouse_genomes_project 11 102288042 102298168 - MGP_WSBEiJ_P0031559 Klhl11 protein_coding protein_coding MGP_WSBEiJ_T0033325.1 MGP_WSBEiJ_G0018873.1 mouse_genomes_project 11 123818946 123828551 - MGP_WSBEiJ_P0033325 Pycr1 protein_coding protein_coding MGP_WSBEiJ_T0033326.1 MGP_WSBEiJ_G0018873.1 mouse_genomes_project 11 123824291 123828629 - MGP_WSBEiJ_P0033326 Pycr1 protein_coding protein_coding MGP_WSBEiJ_T0033327.1 MGP_WSBEiJ_G0018873.1 mouse_genomes_project 11 123826104 123828524 - MGP_WSBEiJ_P0033327 Pycr1 protein_coding protein_coding MGP_WSBEiJ_T0033328.1 MGP_WSBEiJ_G0018873.1 mouse_genomes_project 11 123826358 123828585 - MGP_WSBEiJ_P0033328 Pycr1 protein_coding protein_coding MGP_WSBEiJ_T0033329.1 MGP_WSBEiJ_G0018873.1 mouse_genomes_project 11 123826594 123828650 - MGP_WSBEiJ_P0033329 Pycr1 protein_coding protein_coding MGP_WSBEiJ_T0033330.1 MGP_WSBEiJ_G0018873.1 mouse_genomes_project 11 123827625 123828585 - Pycr1 protein_coding retained_intron MGP_WSBEiJ_T0097680.1 MGP_WSBEiJ_G0036343.1 mouse_genomes_project 11 20236877 20236978 + Gm24917 snRNA snRNA MGP_WSBEiJ_T0027673.1 MGP_WSBEiJ_G0017489.1 mouse_genomes_project 11 28687408 28702296 - MGP_WSBEiJ_P0027673 Chac2 protein_coding protein_coding MGP_WSBEiJ_T0027674.1 MGP_WSBEiJ_G0017489.1 mouse_genomes_project 11 28687653 28702280 - MGP_WSBEiJ_P0027674 Chac2 protein_coding protein_coding MGP_WSBEiJ_T0027748.1 MGP_WSBEiJ_G0017509.1 mouse_genomes_project 11 30947951 30960103 - MGP_WSBEiJ_P0027748 Npm1 protein_coding protein_coding MGP_WSBEiJ_T0027749.1 MGP_WSBEiJ_G0017509.1 mouse_genomes_project 11 30948166 30959969 - MGP_WSBEiJ_P0027749 Npm1 protein_coding protein_coding MGP_WSBEiJ_T0027750.1 MGP_WSBEiJ_G0017509.1 mouse_genomes_project 11 30948167 30951363 - Npm1 protein_coding processed_transcript MGP_WSBEiJ_T0027751.1 MGP_WSBEiJ_G0017509.1 mouse_genomes_project 11 30951824 30959974 - MGP_WSBEiJ_P0027751 Npm1 protein_coding protein_coding MGP_WSBEiJ_T0027752.1 MGP_WSBEiJ_G0017509.1 mouse_genomes_project 11 30952225 30959973 - MGP_WSBEiJ_P0027752 Npm1 protein_coding protein_coding MGP_WSBEiJ_T0027753.1 MGP_WSBEiJ_G0017509.1 mouse_genomes_project 11 30952922 30954174 - Npm1 protein_coding processed_transcript MGP_WSBEiJ_T0028521.1 MGP_WSBEiJ_G0017734.1 mouse_genomes_project 11 57752328 57753371 + MGP_WSBEiJ_P0028521 protein_coding protein_coding MGP_WSBEiJ_T0003118.1 MGP_WSBEiJ_G0002900.1 mouse_genomes_project 11 61833923 61855450 + Gm12278 antisense antisense MGP_WSBEiJ_T0012345.1 MGP_WSBEiJ_G0010475.1 mouse_genomes_project 11 52959487 52960619 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030073.1 MGP_WSBEiJ_G0018105.1 mouse_genomes_project 11 77472836 77645969 + MGP_WSBEiJ_P0030073 Ssh2 protein_coding protein_coding MGP_WSBEiJ_T0030074.1 MGP_WSBEiJ_G0018105.1 mouse_genomes_project 11 77472836 77720994 + MGP_WSBEiJ_P0030074 Ssh2 protein_coding protein_coding MGP_WSBEiJ_T0030075.1 MGP_WSBEiJ_G0018105.1 mouse_genomes_project 11 77599141 77602599 + Ssh2 protein_coding retained_intron MGP_WSBEiJ_T0030076.1 MGP_WSBEiJ_G0018105.1 mouse_genomes_project 11 77600690 77677420 + Ssh2 protein_coding processed_transcript MGP_WSBEiJ_T0030077.1 MGP_WSBEiJ_G0018105.1 mouse_genomes_project 11 77600692 77716304 + MGP_WSBEiJ_P0030077 Ssh2 protein_coding protein_coding MGP_WSBEiJ_T0030078.1 MGP_WSBEiJ_G0018105.1 mouse_genomes_project 11 77600698 77696411 + Ssh2 protein_coding retained_intron MGP_WSBEiJ_T0030079.1 MGP_WSBEiJ_G0018105.1 mouse_genomes_project 11 77644252 77646819 + Ssh2 protein_coding retained_intron MGP_WSBEiJ_T0031687.1 MGP_WSBEiJ_G0018541.1 mouse_genomes_project 11 103075080 103112519 - MGP_WSBEiJ_P0031687 Ezh1 protein_coding protein_coding MGP_WSBEiJ_T0031688.1 MGP_WSBEiJ_G0018541.1 mouse_genomes_project 11 103075416 103076564 - Ezh1 protein_coding processed_transcript MGP_WSBEiJ_T0031689.1 MGP_WSBEiJ_G0018541.1 mouse_genomes_project 11 103075871 103086591 - Ezh1 protein_coding processed_transcript MGP_WSBEiJ_T0031690.1 MGP_WSBEiJ_G0018541.1 mouse_genomes_project 11 103079491 103112529 - MGP_WSBEiJ_P0031690 Ezh1 protein_coding protein_coding MGP_WSBEiJ_T0031691.1 MGP_WSBEiJ_G0018541.1 mouse_genomes_project 11 103080736 103083042 - Ezh1 protein_coding processed_transcript MGP_WSBEiJ_T0031692.1 MGP_WSBEiJ_G0018541.1 mouse_genomes_project 11 103081401 103094772 - Ezh1 protein_coding processed_transcript MGP_WSBEiJ_T0031693.1 MGP_WSBEiJ_G0018541.1 mouse_genomes_project 11 103092129 103093599 - Ezh1 protein_coding processed_transcript MGP_WSBEiJ_T0031694.1 MGP_WSBEiJ_G0018541.1 mouse_genomes_project 11 103104005 103112545 - Ezh1 protein_coding processed_transcript MGP_WSBEiJ_T0030182.1 MGP_WSBEiJ_G0018125.1 mouse_genomes_project 11 78486603 78496920 - Nek8 protein_coding retained_intron MGP_WSBEiJ_T0030183.1 MGP_WSBEiJ_G0018125.1 mouse_genomes_project 11 78486603 78496984 - MGP_WSBEiJ_P0030183 Nek8 protein_coding protein_coding MGP_WSBEiJ_T0030184.1 MGP_WSBEiJ_G0018125.1 mouse_genomes_project 11 78486607 78487882 - Nek8 protein_coding retained_intron MGP_WSBEiJ_T0030185.1 MGP_WSBEiJ_G0018125.1 mouse_genomes_project 11 78487015 78496936 - Nek8 protein_coding retained_intron MGP_WSBEiJ_T0030186.1 MGP_WSBEiJ_G0018125.1 mouse_genomes_project 11 78487748 78488528 - Nek8 protein_coding retained_intron MGP_WSBEiJ_T0030187.1 MGP_WSBEiJ_G0018125.1 mouse_genomes_project 11 78489467 78490324 - Nek8 protein_coding retained_intron MGP_WSBEiJ_T0030188.1 MGP_WSBEiJ_G0018125.1 mouse_genomes_project 11 78490486 78496923 - Nek8 protein_coding retained_intron MGP_WSBEiJ_T0030189.1 MGP_WSBEiJ_G0018125.1 mouse_genomes_project 11 78491682 78496943 - MGP_WSBEiJ_P0030189 Nek8 protein_coding protein_coding MGP_WSBEiJ_T0011106.1 MGP_WSBEiJ_G0009263.1 mouse_genomes_project 11 56945257 56945528 + Gm26025 misc_RNA misc_RNA MGP_WSBEiJ_T0028757.1 MGP_WSBEiJ_G0017797.1 mouse_genomes_project 11 60497972 60547677 - MGP_WSBEiJ_P0028757 Aldh3a2 protein_coding protein_coding MGP_WSBEiJ_T0028758.1 MGP_WSBEiJ_G0017797.1 mouse_genomes_project 11 60525719 60547677 - MGP_WSBEiJ_P0028758 Aldh3a2 protein_coding protein_coding MGP_WSBEiJ_T0028759.1 MGP_WSBEiJ_G0017797.1 mouse_genomes_project 11 60528393 60547677 - MGP_WSBEiJ_P0028759 Aldh3a2 protein_coding protein_coding MGP_WSBEiJ_T0028760.1 MGP_WSBEiJ_G0017797.1 mouse_genomes_project 11 60529938 60542827 - Aldh3a2 protein_coding processed_transcript MGP_WSBEiJ_T0028761.1 MGP_WSBEiJ_G0017797.1 mouse_genomes_project 11 60537785 60547956 - Aldh3a2 protein_coding processed_transcript MGP_WSBEiJ_T0028762.1 MGP_WSBEiJ_G0017797.1 mouse_genomes_project 11 60544661 60547619 - Aldh3a2 protein_coding processed_transcript MGP_WSBEiJ_T0028763.1 MGP_WSBEiJ_G0017797.1 mouse_genomes_project 11 60545715 60547933 - Aldh3a2 protein_coding processed_transcript MGP_WSBEiJ_T0003081.1 MGP_WSBEiJ_G0002868.1 mouse_genomes_project 11 49256248 49257494 - Gm12199 antisense antisense MGP_WSBEiJ_T0003062.1 MGP_WSBEiJ_G0002850.1 mouse_genomes_project 11 21590900 21603909 - 4930538E20Rik antisense antisense MGP_WSBEiJ_T0003063.1 MGP_WSBEiJ_G0002850.1 mouse_genomes_project 11 21597245 21603866 - 4930538E20Rik antisense antisense MGP_WSBEiJ_T0003059.1 MGP_WSBEiJ_G0002847.1 mouse_genomes_project 11 16215634 16216971 + Gm16141 antisense antisense MGP_WSBEiJ_T0030858.1 MGP_WSBEiJ_G0018300.1 mouse_genomes_project 11 91707930 91752290 - MGP_WSBEiJ_P0030858 Tom1l1 protein_coding protein_coding MGP_WSBEiJ_T0030859.1 MGP_WSBEiJ_G0018300.1 mouse_genomes_project 11 91710155 91727440 - MGP_WSBEiJ_P0030859 Tom1l1 protein_coding protein_coding MGP_WSBEiJ_T0030860.1 MGP_WSBEiJ_G0018300.1 mouse_genomes_project 11 91710156 91752284 - MGP_WSBEiJ_P0030860 Tom1l1 protein_coding protein_coding MGP_WSBEiJ_T0030861.1 MGP_WSBEiJ_G0018300.1 mouse_genomes_project 11 91710156 91752262 - MGP_WSBEiJ_P0030861 Tom1l1 protein_coding protein_coding MGP_WSBEiJ_T0030862.1 MGP_WSBEiJ_G0018300.1 mouse_genomes_project 11 91710694 91714395 - Tom1l1 protein_coding retained_intron MGP_WSBEiJ_T0030863.1 MGP_WSBEiJ_G0018300.1 mouse_genomes_project 11 91721502 91727754 - Tom1l1 protein_coding retained_intron MGP_WSBEiJ_T0030864.1 MGP_WSBEiJ_G0018300.1 mouse_genomes_project 11 91735002 91752271 - MGP_WSBEiJ_P0030864 Tom1l1 protein_coding protein_coding MGP_WSBEiJ_T0030865.1 MGP_WSBEiJ_G0018300.1 mouse_genomes_project 11 91747962 91753049 - Tom1l1 protein_coding processed_transcript MGP_WSBEiJ_T0030305.1 MGP_WSBEiJ_G0018155.1 mouse_genomes_project 11 79634204 79649156 - MGP_WSBEiJ_P0030305 Wsb1 protein_coding protein_coding MGP_WSBEiJ_T0030306.1 MGP_WSBEiJ_G0018155.1 mouse_genomes_project 11 79634220 79637878 - Wsb1 protein_coding retained_intron MGP_WSBEiJ_T0030307.1 MGP_WSBEiJ_G0018155.1 mouse_genomes_project 11 79635109 79643506 - MGP_WSBEiJ_P0030307 Wsb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030308.1 MGP_WSBEiJ_G0018155.1 mouse_genomes_project 11 79635140 79637781 - Wsb1 protein_coding processed_transcript MGP_WSBEiJ_T0030309.1 MGP_WSBEiJ_G0018155.1 mouse_genomes_project 11 79638141 79649154 - MGP_WSBEiJ_P0030309 Wsb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030310.1 MGP_WSBEiJ_G0018155.1 mouse_genomes_project 11 79638253 79648955 - MGP_WSBEiJ_P0030310 Wsb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030311.1 MGP_WSBEiJ_G0018155.1 mouse_genomes_project 11 79638958 79645509 - Wsb1 protein_coding retained_intron MGP_WSBEiJ_T0033044.1 MGP_WSBEiJ_G0018818.1 mouse_genomes_project 11 121320357 121351064 - MGP_WSBEiJ_P0033044 Usp36 protein_coding protein_coding MGP_WSBEiJ_T0033045.1 MGP_WSBEiJ_G0018818.1 mouse_genomes_project 11 121320358 121326753 - Usp36 protein_coding retained_intron MGP_WSBEiJ_T0033046.1 MGP_WSBEiJ_G0018818.1 mouse_genomes_project 11 121321558 121323989 - Usp36 protein_coding retained_intron MGP_WSBEiJ_T0033047.1 MGP_WSBEiJ_G0018818.1 mouse_genomes_project 11 121344522 121350800 - Usp36 protein_coding retained_intron MGP_WSBEiJ_T0006113.1 MGP_WSBEiJ_G0005104.1 mouse_genomes_project 11 26331865 26343561 + 2810471M01Rik lincRNA lincRNA MGP_WSBEiJ_T0032970.1 MGP_WSBEiJ_G0018801.1 mouse_genomes_project 11 120178225 120359113 + MGP_WSBEiJ_P0032970 Sept9 protein_coding protein_coding MGP_WSBEiJ_T0032971.1 MGP_WSBEiJ_G0018801.1 mouse_genomes_project 11 120217451 120359101 + MGP_WSBEiJ_P0032971 Sept9 protein_coding protein_coding MGP_WSBEiJ_T0032972.1 MGP_WSBEiJ_G0018801.1 mouse_genomes_project 11 120254199 120359108 + MGP_WSBEiJ_P0032972 Sept9 protein_coding protein_coding MGP_WSBEiJ_T0032973.1 MGP_WSBEiJ_G0018801.1 mouse_genomes_project 11 120301124 120349017 + MGP_WSBEiJ_P0032973 Sept9 protein_coding protein_coding MGP_WSBEiJ_T0032974.1 MGP_WSBEiJ_G0018801.1 mouse_genomes_project 11 120319411 120353172 + MGP_WSBEiJ_P0032974 Sept9 protein_coding protein_coding MGP_WSBEiJ_T0032975.1 MGP_WSBEiJ_G0018801.1 mouse_genomes_project 11 120325412 120358421 + Sept9 protein_coding retained_intron MGP_WSBEiJ_T0032976.1 MGP_WSBEiJ_G0018801.1 mouse_genomes_project 11 120349985 120353795 + Sept9 protein_coding retained_intron MGP_WSBEiJ_T0032977.1 MGP_WSBEiJ_G0018801.1 mouse_genomes_project 11 120356152 120357658 + Sept9 protein_coding retained_intron MGP_WSBEiJ_T0028304.1 MGP_WSBEiJ_G0017665.1 mouse_genomes_project 11 52386779 52447061 - MGP_WSBEiJ_P0028304 Rad50 protein_coding protein_coding MGP_WSBEiJ_T0028305.1 MGP_WSBEiJ_G0017665.1 mouse_genomes_project 11 52412731 52447061 - MGP_WSBEiJ_P0028305 Rad50 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028306.1 MGP_WSBEiJ_G0017665.1 mouse_genomes_project 11 52418120 52419514 - Rad50 protein_coding processed_transcript MGP_WSBEiJ_T0028307.1 MGP_WSBEiJ_G0017665.1 mouse_genomes_project 11 52422735 52447037 - MGP_WSBEiJ_P0028307 Rad50 protein_coding protein_coding MGP_WSBEiJ_T0028308.1 MGP_WSBEiJ_G0017665.1 mouse_genomes_project 11 52430038 52433120 - Rad50 protein_coding processed_transcript MGP_WSBEiJ_T0011105.1 MGP_WSBEiJ_G0009262.1 mouse_genomes_project 11 52439303 52439613 + Gm22275 misc_RNA misc_RNA MGP_WSBEiJ_T0032506.1 MGP_WSBEiJ_G0018713.1 mouse_genomes_project 11 117423284 117429805 + MGP_WSBEiJ_P0032506 Rpl38 protein_coding protein_coding MGP_WSBEiJ_T0032507.1 MGP_WSBEiJ_G0018713.1 mouse_genomes_project 11 117423308 117429805 + MGP_WSBEiJ_P0032507 Rpl38 protein_coding protein_coding MGP_WSBEiJ_T0032508.1 MGP_WSBEiJ_G0018713.1 mouse_genomes_project 11 117423369 117429805 + MGP_WSBEiJ_P0032508 Rpl38 protein_coding protein_coding MGP_WSBEiJ_T0032509.1 MGP_WSBEiJ_G0018713.1 mouse_genomes_project 11 117423386 117429805 + MGP_WSBEiJ_P0032509 Rpl38 protein_coding protein_coding MGP_WSBEiJ_T0030156.1 MGP_WSBEiJ_G0018119.1 mouse_genomes_project 11 78290666 78337357 + MGP_WSBEiJ_P0030156 Phf12 protein_coding protein_coding MGP_WSBEiJ_T0030157.1 MGP_WSBEiJ_G0018119.1 mouse_genomes_project 11 78290714 78341681 + MGP_WSBEiJ_P0030157 Phf12 protein_coding protein_coding MGP_WSBEiJ_T0030158.1 MGP_WSBEiJ_G0018119.1 mouse_genomes_project 11 78334573 78337335 + MGP_WSBEiJ_P0030158 Phf12 protein_coding protein_coding MGP_WSBEiJ_T0030159.1 MGP_WSBEiJ_G0018119.1 mouse_genomes_project 11 78334787 78337104 + Phf12 protein_coding retained_intron MGP_WSBEiJ_T0030160.1 MGP_WSBEiJ_G0018119.1 mouse_genomes_project 11 78334821 78337325 + MGP_WSBEiJ_P0030160 Phf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030161.1 MGP_WSBEiJ_G0018119.1 mouse_genomes_project 11 78334888 78339989 + MGP_WSBEiJ_P0030161 Phf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030162.1 MGP_WSBEiJ_G0018119.1 mouse_genomes_project 11 78334911 78337159 + MGP_WSBEiJ_P0030162 Phf12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030163.1 MGP_WSBEiJ_G0018119.1 mouse_genomes_project 11 78339251 78340719 + Phf12 protein_coding retained_intron MGP_WSBEiJ_T0029038.1 MGP_WSBEiJ_G0017859.1 mouse_genomes_project 11 67512446 67535611 - Cfap52 protein_coding processed_transcript MGP_WSBEiJ_T0029039.1 MGP_WSBEiJ_G0017859.1 mouse_genomes_project 11 67512448 67555649 - MGP_WSBEiJ_P0029039 Cfap52 protein_coding protein_coding MGP_WSBEiJ_T0029040.1 MGP_WSBEiJ_G0017859.1 mouse_genomes_project 11 67512596 67520829 - Cfap52 protein_coding processed_transcript MGP_WSBEiJ_T0029041.1 MGP_WSBEiJ_G0017859.1 mouse_genomes_project 11 67528963 67555658 - MGP_WSBEiJ_P0029041 Cfap52 protein_coding protein_coding MGP_WSBEiJ_T0031440.1 MGP_WSBEiJ_G0018440.1 mouse_genomes_project 11 100774396 100798956 - MGP_WSBEiJ_P0031440 Tns4 protein_coding protein_coding MGP_WSBEiJ_T0031441.1 MGP_WSBEiJ_G0018440.1 mouse_genomes_project 11 100776858 100782573 - Tns4 protein_coding processed_transcript MGP_WSBEiJ_T0031442.1 MGP_WSBEiJ_G0018440.1 mouse_genomes_project 11 100779390 100784050 - Tns4 protein_coding retained_intron MGP_WSBEiJ_T0031443.1 MGP_WSBEiJ_G0018440.1 mouse_genomes_project 11 100795123 100798935 - Tns4 protein_coding retained_intron MGP_WSBEiJ_T0028701.1 MGP_WSBEiJ_G0017784.1 mouse_genomes_project 11 59963270 59963869 - Flii protein_coding retained_intron MGP_WSBEiJ_T0028702.1 MGP_WSBEiJ_G0017784.1 mouse_genomes_project 11 59963290 59976384 - MGP_WSBEiJ_P0028702 Flii protein_coding protein_coding MGP_WSBEiJ_T0028703.1 MGP_WSBEiJ_G0017784.1 mouse_genomes_project 11 59968372 59969287 - Flii protein_coding retained_intron MGP_WSBEiJ_T0028704.1 MGP_WSBEiJ_G0017784.1 mouse_genomes_project 11 59973485 59976344 - Flii protein_coding retained_intron MGP_WSBEiJ_T0097265.1 MGP_WSBEiJ_G0035945.1 mouse_genomes_project 11 54360458 54360582 + Gm12238 sense_intronic sense_intronic MGP_WSBEiJ_T0026997.1 MGP_WSBEiJ_G0017335.1 mouse_genomes_project 11 755087 760207 + MGP_WSBEiJ_P0026997 Dusp18 protein_coding protein_coding MGP_WSBEiJ_T0026998.1 MGP_WSBEiJ_G0017335.1 mouse_genomes_project 11 755087 762154 + MGP_WSBEiJ_P0026998 Dusp18 protein_coding protein_coding MGP_WSBEiJ_T0009559.1 MGP_WSBEiJ_G0007716.1 mouse_genomes_project 11 72360098 72360207 + Mir6338 miRNA miRNA MGP_WSBEiJ_T0026919.1 MGP_WSBEiJ_G0017323.1 mouse_genomes_project 11 52213 69119 - MGP_WSBEiJ_P0026919 Drg1 protein_coding protein_coding MGP_WSBEiJ_T0026920.1 MGP_WSBEiJ_G0017323.1 mouse_genomes_project 11 52403 55173 - Drg1 protein_coding retained_intron MGP_WSBEiJ_T0026921.1 MGP_WSBEiJ_G0017323.1 mouse_genomes_project 11 56724 65258 - Drg1 protein_coding retained_intron MGP_WSBEiJ_T0026922.1 MGP_WSBEiJ_G0017323.1 mouse_genomes_project 11 59360 69118 - Drg1 protein_coding processed_transcript MGP_WSBEiJ_T0026923.1 MGP_WSBEiJ_G0017323.1 mouse_genomes_project 11 60543 69141 - Drg1 protein_coding retained_intron MGP_WSBEiJ_T0026924.1 MGP_WSBEiJ_G0017323.1 mouse_genomes_project 11 62140 69119 - MGP_WSBEiJ_P0026924 Drg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027830.1 MGP_WSBEiJ_G0017532.1 mouse_genomes_project 11 39967329 40065547 - MGP_WSBEiJ_P0027830 Gabrg2 protein_coding protein_coding MGP_WSBEiJ_T0027831.1 MGP_WSBEiJ_G0017532.1 mouse_genomes_project 11 39970166 39974915 - Gabrg2 protein_coding retained_intron MGP_WSBEiJ_T0027832.1 MGP_WSBEiJ_G0017532.1 mouse_genomes_project 11 39972854 40065572 - MGP_WSBEiJ_P0027832 Gabrg2 protein_coding protein_coding MGP_WSBEiJ_T0027997.1 MGP_WSBEiJ_G0017586.1 mouse_genomes_project 11 47578338 47584600 + MGP_WSBEiJ_P0027997 Olfr1395 protein_coding protein_coding MGP_WSBEiJ_T0027998.1 MGP_WSBEiJ_G0017586.1 mouse_genomes_project 11 47583646 47584600 + MGP_WSBEiJ_P0027998 Olfr1395 protein_coding protein_coding MGP_WSBEiJ_T0032260.1 MGP_WSBEiJ_G0018659.1 mouse_genomes_project 11 108516669 108520119 - MGP_WSBEiJ_P0032260 Cd79b protein_coding protein_coding MGP_WSBEiJ_T0032261.1 MGP_WSBEiJ_G0018659.1 mouse_genomes_project 11 108516672 108519886 - MGP_WSBEiJ_P0032261 Cd79b protein_coding protein_coding MGP_WSBEiJ_T0032124.1 MGP_WSBEiJ_G0018626.1 mouse_genomes_project 11 106246159 106291980 + MGP_WSBEiJ_P0032124 Crhr1 protein_coding protein_coding MGP_WSBEiJ_T0012221.1 MGP_WSBEiJ_G0010351.1 mouse_genomes_project 11 3741786 3742362 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097701.1 MGP_WSBEiJ_G0036364.1 mouse_genomes_project 11 68568127 68568230 + Gm22608 snRNA snRNA MGP_WSBEiJ_T0003246.1 MGP_WSBEiJ_G0003003.1 mouse_genomes_project 11 109298658 109300992 + antisense antisense MGP_WSBEiJ_T0003247.1 MGP_WSBEiJ_G0003003.1 mouse_genomes_project 11 109298763 109300997 + antisense antisense MGP_WSBEiJ_T0028558.1 MGP_WSBEiJ_G0017750.1 mouse_genomes_project 11 58340958 58349724 - MGP_WSBEiJ_P0028558 Gjc2 protein_coding protein_coding MGP_WSBEiJ_T0028559.1 MGP_WSBEiJ_G0017750.1 mouse_genomes_project 11 58340958 58350111 - MGP_WSBEiJ_P0028559 Gjc2 protein_coding protein_coding MGP_WSBEiJ_T0028459.1 MGP_WSBEiJ_G0017705.1 mouse_genomes_project 11 56989300 57046406 + MGP_WSBEiJ_P0028459 Larp1 protein_coding protein_coding MGP_WSBEiJ_T0028460.1 MGP_WSBEiJ_G0017705.1 mouse_genomes_project 11 56989300 57046409 + MGP_WSBEiJ_P0028460 Larp1 protein_coding protein_coding MGP_WSBEiJ_T0028461.1 MGP_WSBEiJ_G0017705.1 mouse_genomes_project 11 57025899 57027299 + Larp1 protein_coding retained_intron MGP_WSBEiJ_T0032697.1 MGP_WSBEiJ_G0018754.1 mouse_genomes_project 11 118495901 118560009 - MGP_WSBEiJ_P0032697 Grb2 protein_coding protein_coding MGP_WSBEiJ_T0032698.1 MGP_WSBEiJ_G0018754.1 mouse_genomes_project 11 118495901 118560236 - MGP_WSBEiJ_P0032698 Grb2 protein_coding protein_coding MGP_WSBEiJ_T0032699.1 MGP_WSBEiJ_G0018754.1 mouse_genomes_project 11 118495901 118569298 - MGP_WSBEiJ_P0032699 Grb2 protein_coding protein_coding MGP_WSBEiJ_T0032700.1 MGP_WSBEiJ_G0018754.1 mouse_genomes_project 11 118496506 118569277 - MGP_WSBEiJ_P0032700 Grb2 protein_coding protein_coding MGP_WSBEiJ_T0032701.1 MGP_WSBEiJ_G0018754.1 mouse_genomes_project 11 118502544 118560630 - MGP_WSBEiJ_P0032701 Grb2 protein_coding protein_coding MGP_WSBEiJ_T0032010.1 MGP_WSBEiJ_G0018599.1 mouse_genomes_project 11 104886127 104888319 + MGP_WSBEiJ_P0032010 Higd1b protein_coding protein_coding MGP_WSBEiJ_T0032011.1 MGP_WSBEiJ_G0018599.1 mouse_genomes_project 11 104886574 104888319 + MGP_WSBEiJ_P0032011 Higd1b protein_coding protein_coding MGP_WSBEiJ_T0032012.1 MGP_WSBEiJ_G0018599.1 mouse_genomes_project 11 104886724 104888319 + MGP_WSBEiJ_P0032012 Higd1b protein_coding protein_coding MGP_WSBEiJ_T0097730.1 MGP_WSBEiJ_G0036393.1 mouse_genomes_project 11 97471320 97471504 - Gm22423 snRNA snRNA MGP_WSBEiJ_T0028501.1 MGP_WSBEiJ_G0017719.1 mouse_genomes_project 11 57484923 57485989 - MGP_WSBEiJ_P0028501 Olfr30 protein_coding protein_coding MGP_WSBEiJ_T0012505.1 MGP_WSBEiJ_G0010635.1 mouse_genomes_project 11 119419629 119419932 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012385.1 MGP_WSBEiJ_G0010515.1 mouse_genomes_project 11 69386409 69386798 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0026937.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 136333 150254 + MGP_WSBEiJ_P0026937 Pik3ip1 protein_coding protein_coding MGP_WSBEiJ_T0026938.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 136660 138042 + Pik3ip1 protein_coding retained_intron MGP_WSBEiJ_T0026939.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 136719 148966 + MGP_WSBEiJ_P0026939 Pik3ip1 protein_coding protein_coding MGP_WSBEiJ_T0026940.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 136725 139901 + Pik3ip1 protein_coding retained_intron MGP_WSBEiJ_T0026941.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 136740 139903 + MGP_WSBEiJ_P0026941 Pik3ip1 protein_coding protein_coding MGP_WSBEiJ_T0026942.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 138010 139618 + Pik3ip1 protein_coding retained_intron MGP_WSBEiJ_T0026943.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 138047 148957 + MGP_WSBEiJ_P0026943 Pik3ip1 protein_coding protein_coding MGP_WSBEiJ_T0026944.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 138389 148975 + MGP_WSBEiJ_P0026944 Pik3ip1 protein_coding protein_coding MGP_WSBEiJ_T0026945.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 138910 139899 + Pik3ip1 protein_coding processed_transcript MGP_WSBEiJ_T0026946.1 MGP_WSBEiJ_G0017325.1 mouse_genomes_project 11 140320 149288 + Pik3ip1 protein_coding processed_transcript MGP_WSBEiJ_T0033472.1 MGP_WSBEiJ_G0018904.1 mouse_genomes_project 11 124648767 124664257 + MGP_WSBEiJ_P0033472 Fn3k protein_coding protein_coding MGP_WSBEiJ_T0033473.1 MGP_WSBEiJ_G0018904.1 mouse_genomes_project 11 124648821 124656773 + MGP_WSBEiJ_P0033473 Fn3k protein_coding protein_coding MGP_WSBEiJ_T0033474.1 MGP_WSBEiJ_G0018904.1 mouse_genomes_project 11 124648822 124657297 + MGP_WSBEiJ_P0033474 Fn3k protein_coding protein_coding MGP_WSBEiJ_T0098915.1 MGP_WSBEiJ_G0037578.1 mouse_genomes_project 11 47145641 47145708 + Gm25296 snoRNA snoRNA MGP_WSBEiJ_T0028523.1 MGP_WSBEiJ_G0017736.1 mouse_genomes_project 11 57870389 57875431 + MGP_WSBEiJ_P0028523 Olfr315 protein_coding protein_coding MGP_WSBEiJ_T0028524.1 MGP_WSBEiJ_G0017736.1 mouse_genomes_project 11 57875012 57876009 + MGP_WSBEiJ_P0028524 Olfr315 protein_coding protein_coding MGP_WSBEiJ_T0031098.1 MGP_WSBEiJ_G0018359.1 mouse_genomes_project 11 97674902 97680039 + MGP_WSBEiJ_P0031098 Hoxb9 protein_coding protein_coding MGP_WSBEiJ_T0031099.1 MGP_WSBEiJ_G0018359.1 mouse_genomes_project 11 97674968 97680039 + MGP_WSBEiJ_P0031099 Hoxb9 protein_coding protein_coding MGP_WSBEiJ_T0027108.1 MGP_WSBEiJ_G0017362.1 mouse_genomes_project 11 1858113 1867424 - MGP_WSBEiJ_P0027108 Nefh protein_coding protein_coding MGP_WSBEiJ_T0027772.1 MGP_WSBEiJ_G0017517.1 mouse_genomes_project 11 31911913 31957093 + MGP_WSBEiJ_P0027772 Lcp2 protein_coding protein_coding MGP_WSBEiJ_T0027773.1 MGP_WSBEiJ_G0017517.1 mouse_genomes_project 11 31912120 31955029 + MGP_WSBEiJ_P0027773 Lcp2 protein_coding protein_coding MGP_WSBEiJ_T0027774.1 MGP_WSBEiJ_G0017517.1 mouse_genomes_project 11 31912153 31957078 + MGP_WSBEiJ_P0027774 Lcp2 protein_coding protein_coding MGP_WSBEiJ_T0027775.1 MGP_WSBEiJ_G0017517.1 mouse_genomes_project 11 31943062 31943478 + Lcp2 protein_coding processed_transcript MGP_WSBEiJ_T0027776.1 MGP_WSBEiJ_G0017517.1 mouse_genomes_project 11 31951889 31955557 + Lcp2 protein_coding processed_transcript MGP_WSBEiJ_T0027454.1 MGP_WSBEiJ_G0017442.1 mouse_genomes_project 11 18628785 18679377 - MGP_WSBEiJ_P0027454 Ugp2 protein_coding protein_coding MGP_WSBEiJ_T0027455.1 MGP_WSBEiJ_G0017442.1 mouse_genomes_project 11 18629318 18680762 - MGP_WSBEiJ_P0027455 Ugp2 protein_coding protein_coding MGP_WSBEiJ_T0027456.1 MGP_WSBEiJ_G0017442.1 mouse_genomes_project 11 18629569 18637535 - Ugp2 protein_coding processed_transcript MGP_WSBEiJ_T0027457.1 MGP_WSBEiJ_G0017442.1 mouse_genomes_project 11 18629585 18631148 - Ugp2 protein_coding processed_transcript MGP_WSBEiJ_T0027271.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3630422 3640772 - MGP_WSBEiJ_P0027271 Tbrg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027272.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3630423 3640796 - MGP_WSBEiJ_P0027272 Tbrg4 protein_coding protein_coding MGP_WSBEiJ_T0027273.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3631247 3640772 - MGP_WSBEiJ_P0027273 Tbrg4 protein_coding protein_coding MGP_WSBEiJ_T0027274.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3631249 3640772 - MGP_WSBEiJ_P0027274 Tbrg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027275.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3632078 3632854 - Tbrg4 protein_coding retained_intron MGP_WSBEiJ_T0027276.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3634380 3635738 - Tbrg4 protein_coding processed_transcript MGP_WSBEiJ_T0027277.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3634410 3635268 - Tbrg4 protein_coding retained_intron MGP_WSBEiJ_T0027278.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3634824 3636074 - Tbrg4 protein_coding retained_intron MGP_WSBEiJ_T0027279.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3635002 3635888 - Tbrg4 protein_coding processed_transcript MGP_WSBEiJ_T0027280.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3635819 3640796 - MGP_WSBEiJ_P0027280 Tbrg4 protein_coding protein_coding MGP_WSBEiJ_T0027281.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3638028 3640751 - Tbrg4 protein_coding processed_transcript MGP_WSBEiJ_T0027282.1 MGP_WSBEiJ_G0017398.1 mouse_genomes_project 11 3638719 3640294 - MGP_WSBEiJ_P0027282 Tbrg4 protein_coding protein_coding MGP_WSBEiJ_T0032385.1 MGP_WSBEiJ_G0018684.1 mouse_genomes_project 11 111275434 111314389 + MGP_WSBEiJ_P0032385 Axin2 protein_coding protein_coding MGP_WSBEiJ_T0032386.1 MGP_WSBEiJ_G0018684.1 mouse_genomes_project 11 111275885 111278687 + MGP_WSBEiJ_P0032386 Axin2 protein_coding protein_coding MGP_WSBEiJ_T0032387.1 MGP_WSBEiJ_G0018684.1 mouse_genomes_project 11 111276421 111278702 + MGP_WSBEiJ_P0032387 Axin2 protein_coding protein_coding MGP_WSBEiJ_T0032388.1 MGP_WSBEiJ_G0018684.1 mouse_genomes_project 11 111276733 111278598 + MGP_WSBEiJ_P0032388 Axin2 protein_coding protein_coding MGP_WSBEiJ_T0032389.1 MGP_WSBEiJ_G0018684.1 mouse_genomes_project 11 111278284 111311214 + MGP_WSBEiJ_P0032389 Axin2 protein_coding protein_coding MGP_WSBEiJ_T0032390.1 MGP_WSBEiJ_G0018684.1 mouse_genomes_project 11 111297566 111301257 + Axin2 protein_coding processed_transcript MGP_WSBEiJ_T0032391.1 MGP_WSBEiJ_G0018684.1 mouse_genomes_project 11 111303554 111314389 + Axin2 protein_coding processed_transcript MGP_WSBEiJ_T0003161.1 MGP_WSBEiJ_G0002936.1 mouse_genomes_project 11 80029262 80045611 - Rab11fip4os1 antisense antisense MGP_WSBEiJ_T0031068.1 MGP_WSBEiJ_G0018349.1 mouse_genomes_project 11 97209617 97218145 + MGP_WSBEiJ_P0031068 Gngt2 protein_coding protein_coding MGP_WSBEiJ_T0031069.1 MGP_WSBEiJ_G0018349.1 mouse_genomes_project 11 97214710 97218145 + MGP_WSBEiJ_P0031069 Gngt2 protein_coding protein_coding MGP_WSBEiJ_T0031070.1 MGP_WSBEiJ_G0018349.1 mouse_genomes_project 11 97214724 97218145 + MGP_WSBEiJ_P0031070 Gngt2 protein_coding protein_coding MGP_WSBEiJ_T0031071.1 MGP_WSBEiJ_G0018349.1 mouse_genomes_project 11 97215079 97218145 + MGP_WSBEiJ_P0031071 Gngt2 protein_coding protein_coding MGP_WSBEiJ_T0031072.1 MGP_WSBEiJ_G0018349.1 mouse_genomes_project 11 97215080 97218145 + MGP_WSBEiJ_P0031072 Gngt2 protein_coding protein_coding MGP_WSBEiJ_T0031073.1 MGP_WSBEiJ_G0018349.1 mouse_genomes_project 11 97215642 97218145 + MGP_WSBEiJ_P0031073 Gngt2 protein_coding protein_coding MGP_WSBEiJ_T0031074.1 MGP_WSBEiJ_G0018349.1 mouse_genomes_project 11 97216019 97218145 + MGP_WSBEiJ_P0031074 Gngt2 protein_coding protein_coding MGP_WSBEiJ_T0100500.1 MGP_WSBEiJ_G0038959.1 mouse_genomes_project 11 101746447 101746687 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0028148.1 MGP_WSBEiJ_G0017624.1 mouse_genomes_project 11 49494124 49497179 - MGP_WSBEiJ_P0028148 4933414I15Rik protein_coding protein_coding MGP_WSBEiJ_T0028149.1 MGP_WSBEiJ_G0017624.1 mouse_genomes_project 11 49495111 49497155 - 4933414I15Rik protein_coding processed_transcript MGP_WSBEiJ_T0100503.1 MGP_WSBEiJ_G0038962.1 mouse_genomes_project 11 119668904 119707208 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0033287.1 MGP_WSBEiJ_G0018867.1 mouse_genomes_project 11 123775581 123781822 - MGP_WSBEiJ_P0033287 Alyref protein_coding protein_coding MGP_WSBEiJ_T0033288.1 MGP_WSBEiJ_G0018867.1 mouse_genomes_project 11 123777969 123779117 - Alyref protein_coding processed_transcript MGP_WSBEiJ_T0033289.1 MGP_WSBEiJ_G0018867.1 mouse_genomes_project 11 123779075 123781688 - Alyref protein_coding retained_intron MGP_WSBEiJ_T0003160.1 MGP_WSBEiJ_G0002935.1 mouse_genomes_project 11 79897030 79899337 - AU040972 antisense antisense MGP_WSBEiJ_T0012410.1 MGP_WSBEiJ_G0010540.1 mouse_genomes_project 11 78043447 78044405 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006091.1 MGP_WSBEiJ_G0005086.1 mouse_genomes_project 11 17407068 17407848 - Gm12031 lincRNA lincRNA MGP_WSBEiJ_T0006092.1 MGP_WSBEiJ_G0005087.1 mouse_genomes_project 11 18117826 18118265 - Gm12037 lincRNA lincRNA MGP_WSBEiJ_T0100501.1 MGP_WSBEiJ_G0038960.1 mouse_genomes_project 11 102060070 102061725 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012374.1 MGP_WSBEiJ_G0010504.1 mouse_genomes_project 11 62074729 62075027 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028303.1 MGP_WSBEiJ_G0017664.1 mouse_genomes_project 11 52367768 52371145 - MGP_WSBEiJ_P0028303 Il13 protein_coding protein_coding MGP_WSBEiJ_T0033382.1 MGP_WSBEiJ_G0018883.1 mouse_genomes_project 11 123972688 123975994 - Rfng protein_coding processed_transcript MGP_WSBEiJ_T0033383.1 MGP_WSBEiJ_G0018883.1 mouse_genomes_project 11 123972690 123976016 - MGP_WSBEiJ_P0033383 Rfng protein_coding protein_coding MGP_WSBEiJ_T0028240.1 MGP_WSBEiJ_G0017646.1 mouse_genomes_project 11 50900445 50930682 - MGP_WSBEiJ_P0028240 Tcf7 protein_coding protein_coding MGP_WSBEiJ_T0028241.1 MGP_WSBEiJ_G0017646.1 mouse_genomes_project 11 50901310 50931125 - MGP_WSBEiJ_P0028241 Tcf7 protein_coding protein_coding MGP_WSBEiJ_T0028242.1 MGP_WSBEiJ_G0017646.1 mouse_genomes_project 11 50901734 50931290 - MGP_WSBEiJ_P0028242 Tcf7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029389.1 MGP_WSBEiJ_G0017937.1 mouse_genomes_project 11 69774464 69780447 + MGP_WSBEiJ_P0029389 Gabarap protein_coding protein_coding MGP_WSBEiJ_T0029390.1 MGP_WSBEiJ_G0017937.1 mouse_genomes_project 11 69774960 69780436 + MGP_WSBEiJ_P0029390 Gabarap protein_coding protein_coding MGP_WSBEiJ_T0029391.1 MGP_WSBEiJ_G0017937.1 mouse_genomes_project 11 69775005 69780431 + Gabarap protein_coding retained_intron MGP_WSBEiJ_T0029392.1 MGP_WSBEiJ_G0017937.1 mouse_genomes_project 11 69775128 69775923 + Gabarap protein_coding processed_transcript MGP_WSBEiJ_T0012321.1 MGP_WSBEiJ_G0010451.1 mouse_genomes_project 11 42574934 42575094 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012375.1 MGP_WSBEiJ_G0010505.1 mouse_genomes_project 11 62130246 62131463 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027974.1 MGP_WSBEiJ_G0017574.1 mouse_genomes_project 11 47212990 47222658 - Irgm1 protein_coding processed_transcript MGP_WSBEiJ_T0027975.1 MGP_WSBEiJ_G0017574.1 mouse_genomes_project 11 47216267 47222349 - MGP_WSBEiJ_P0027975 Irgm1 protein_coding protein_coding MGP_WSBEiJ_T0027976.1 MGP_WSBEiJ_G0017574.1 mouse_genomes_project 11 47217146 47222395 - MGP_WSBEiJ_P0027976 Irgm1 protein_coding protein_coding MGP_WSBEiJ_T0012453.1 MGP_WSBEiJ_G0010583.1 mouse_genomes_project 11 98240513 98240900 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028944.1 MGP_WSBEiJ_G0017832.1 mouse_genomes_project 11 63403716 63522652 - MGP_WSBEiJ_P0028944 Cox10 protein_coding protein_coding MGP_WSBEiJ_T0028945.1 MGP_WSBEiJ_G0017832.1 mouse_genomes_project 11 63514575 63522654 - Cox10 protein_coding processed_transcript MGP_WSBEiJ_T0031495.1 MGP_WSBEiJ_G0018482.1 mouse_genomes_project 11 101695114 101696092 + MGP_WSBEiJ_P0031495 protein_coding protein_coding MGP_WSBEiJ_T0012463.1 MGP_WSBEiJ_G0010593.1 mouse_genomes_project 11 102041454 102043294 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012310.1 MGP_WSBEiJ_G0010440.1 mouse_genomes_project 11 38505655 38506175 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027988.1 MGP_WSBEiJ_G0017582.1 mouse_genomes_project 11 47457349 47466359 - MGP_WSBEiJ_P0027988 protein_coding protein_coding MGP_WSBEiJ_T0028420.1 MGP_WSBEiJ_G0017692.1 mouse_genomes_project 11 54060919 54095411 + MGP_WSBEiJ_P0028420 Slc36a1 protein_coding protein_coding MGP_WSBEiJ_T0028421.1 MGP_WSBEiJ_G0017692.1 mouse_genomes_project 11 54060931 54070841 + Slc36a1 protein_coding processed_transcript MGP_WSBEiJ_T0028422.1 MGP_WSBEiJ_G0017692.1 mouse_genomes_project 11 54060943 54080273 + MGP_WSBEiJ_P0028422 Slc36a1 protein_coding protein_coding MGP_WSBEiJ_T0028423.1 MGP_WSBEiJ_G0017692.1 mouse_genomes_project 11 54060945 54092918 + MGP_WSBEiJ_P0028423 Slc36a1 protein_coding protein_coding MGP_WSBEiJ_T0028424.1 MGP_WSBEiJ_G0017692.1 mouse_genomes_project 11 54070373 54090703 + MGP_WSBEiJ_P0028424 Slc36a1 protein_coding protein_coding MGP_WSBEiJ_T0028258.1 MGP_WSBEiJ_G0017652.1 mouse_genomes_project 11 52067810 52149840 + MGP_WSBEiJ_P0028258 Aff4 protein_coding protein_coding MGP_WSBEiJ_T0028259.1 MGP_WSBEiJ_G0017652.1 mouse_genomes_project 11 52086615 52090854 + MGP_WSBEiJ_P0028259 Aff4 protein_coding protein_coding MGP_WSBEiJ_T0028260.1 MGP_WSBEiJ_G0017652.1 mouse_genomes_project 11 52087172 52094277 + Aff4 protein_coding retained_intron MGP_WSBEiJ_T0028261.1 MGP_WSBEiJ_G0017652.1 mouse_genomes_project 11 52090913 52094050 + Aff4 protein_coding retained_intron MGP_WSBEiJ_T0028262.1 MGP_WSBEiJ_G0017652.1 mouse_genomes_project 11 52091299 52119415 + MGP_WSBEiJ_P0028262 Aff4 protein_coding protein_coding MGP_WSBEiJ_T0028263.1 MGP_WSBEiJ_G0017652.1 mouse_genomes_project 11 52091307 52127336 + Aff4 protein_coding processed_transcript MGP_WSBEiJ_T0028264.1 MGP_WSBEiJ_G0017652.1 mouse_genomes_project 11 52132242 52137542 + Aff4 protein_coding retained_intron MGP_WSBEiJ_T0028265.1 MGP_WSBEiJ_G0017652.1 mouse_genomes_project 11 52138701 52143842 + Aff4 protein_coding retained_intron MGP_WSBEiJ_T0030010.1 MGP_WSBEiJ_G0018091.1 mouse_genomes_project 11 76425243 76426304 + MGP_WSBEiJ_P0030010 Dbil5 protein_coding protein_coding MGP_WSBEiJ_T0032589.1 MGP_WSBEiJ_G0018736.1 mouse_genomes_project 11 118130540 118137356 - MGP_WSBEiJ_P0032589 Ush1g protein_coding protein_coding MGP_WSBEiJ_T0012356.1 MGP_WSBEiJ_G0010486.1 mouse_genomes_project 11 57418823 57419042 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030530.1 MGP_WSBEiJ_G0018222.1 mouse_genomes_project 11 84541408 84600438 + MGP_WSBEiJ_P0030530 Hnf1b protein_coding protein_coding MGP_WSBEiJ_T0030531.1 MGP_WSBEiJ_G0018222.1 mouse_genomes_project 11 84541583 84600444 + MGP_WSBEiJ_P0030531 Hnf1b protein_coding protein_coding MGP_WSBEiJ_T0030532.1 MGP_WSBEiJ_G0018222.1 mouse_genomes_project 11 84542776 84556109 + MGP_WSBEiJ_P0030532 Hnf1b protein_coding protein_coding MGP_WSBEiJ_T0012270.1 MGP_WSBEiJ_G0010400.1 mouse_genomes_project 11 21988356 21989881 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012467.1 MGP_WSBEiJ_G0010597.1 mouse_genomes_project 11 103907635 103908010 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028976.1 MGP_WSBEiJ_G0017841.1 mouse_genomes_project 11 65323687 65683065 - MGP_WSBEiJ_P0028976 Dnah9 protein_coding protein_coding MGP_WSBEiJ_T0028977.1 MGP_WSBEiJ_G0017841.1 mouse_genomes_project 11 65323808 65513188 - MGP_WSBEiJ_P0028977 Dnah9 protein_coding protein_coding MGP_WSBEiJ_T0028978.1 MGP_WSBEiJ_G0017841.1 mouse_genomes_project 11 65344510 65349887 - Dnah9 protein_coding retained_intron MGP_WSBEiJ_T0028979.1 MGP_WSBEiJ_G0017841.1 mouse_genomes_project 11 65406705 65428800 - MGP_WSBEiJ_P0028979 Dnah9 protein_coding protein_coding MGP_WSBEiJ_T0028980.1 MGP_WSBEiJ_G0017841.1 mouse_genomes_project 11 65630649 65682976 - MGP_WSBEiJ_P0028980 Dnah9 protein_coding protein_coding MGP_WSBEiJ_T0028981.1 MGP_WSBEiJ_G0017841.1 mouse_genomes_project 11 65673293 65683083 - Dnah9 protein_coding retained_intron MGP_WSBEiJ_T0032358.1 MGP_WSBEiJ_G0018680.1 mouse_genomes_project 11 110276223 110698202 - MGP_WSBEiJ_P0032358 Prkca protein_coding protein_coding MGP_WSBEiJ_T0032359.1 MGP_WSBEiJ_G0018680.1 mouse_genomes_project 11 110281018 110322399 - MGP_WSBEiJ_P0032359 Prkca protein_coding protein_coding MGP_WSBEiJ_T0032360.1 MGP_WSBEiJ_G0018680.1 mouse_genomes_project 11 110321145 110360348 - Prkca protein_coding processed_transcript MGP_WSBEiJ_T0032361.1 MGP_WSBEiJ_G0018680.1 mouse_genomes_project 11 110542902 110697922 - Prkca protein_coding processed_transcript MGP_WSBEiJ_T0031996.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104804688 104825788 + MGP_WSBEiJ_P0031996 Adam11 protein_coding protein_coding MGP_WSBEiJ_T0031997.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104804688 104825788 + MGP_WSBEiJ_P0031997 Adam11 protein_coding protein_coding MGP_WSBEiJ_T0031998.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104805337 104815855 + Adam11 protein_coding processed_transcript MGP_WSBEiJ_T0031999.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104805434 104816215 + Adam11 protein_coding processed_transcript MGP_WSBEiJ_T0032000.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104814181 104816148 + Adam11 protein_coding processed_transcript MGP_WSBEiJ_T0032001.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104815862 104818042 + Adam11 protein_coding processed_transcript MGP_WSBEiJ_T0032002.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104818461 104821656 + Adam11 protein_coding processed_transcript MGP_WSBEiJ_T0032003.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104818497 104821933 + Adam11 protein_coding processed_transcript MGP_WSBEiJ_T0032004.1 MGP_WSBEiJ_G0018597.1 mouse_genomes_project 11 104822085 104823999 + Adam11 protein_coding processed_transcript MGP_WSBEiJ_T0033404.1 MGP_WSBEiJ_G0018887.1 mouse_genomes_project 11 124019425 124133089 - MGP_WSBEiJ_P0033404 Ccdc57 protein_coding protein_coding MGP_WSBEiJ_T0033405.1 MGP_WSBEiJ_G0018887.1 mouse_genomes_project 11 124019438 124072026 - Ccdc57 protein_coding processed_transcript MGP_WSBEiJ_T0033406.1 MGP_WSBEiJ_G0018887.1 mouse_genomes_project 11 124072146 124085161 - Ccdc57 protein_coding processed_transcript MGP_WSBEiJ_T0032195.1 MGP_WSBEiJ_G0018641.1 mouse_genomes_project 11 107776997 107975594 + MGP_WSBEiJ_P0032195 Tanc2 protein_coding protein_coding MGP_WSBEiJ_T0032196.1 MGP_WSBEiJ_G0018641.1 mouse_genomes_project 11 107777002 108124695 + MGP_WSBEiJ_P0032196 Tanc2 protein_coding protein_coding MGP_WSBEiJ_T0032197.1 MGP_WSBEiJ_G0018641.1 mouse_genomes_project 11 107812851 107911909 + Tanc2 protein_coding processed_transcript MGP_WSBEiJ_T0032198.1 MGP_WSBEiJ_G0018641.1 mouse_genomes_project 11 107909895 107911185 + MGP_WSBEiJ_P0032198 Tanc2 protein_coding protein_coding MGP_WSBEiJ_T0032199.1 MGP_WSBEiJ_G0018641.1 mouse_genomes_project 11 107974604 108117725 + MGP_WSBEiJ_P0032199 Tanc2 protein_coding protein_coding MGP_WSBEiJ_T0032200.1 MGP_WSBEiJ_G0018641.1 mouse_genomes_project 11 108089151 108118124 + MGP_WSBEiJ_P0032200 Tanc2 protein_coding protein_coding MGP_WSBEiJ_T0032201.1 MGP_WSBEiJ_G0018641.1 mouse_genomes_project 11 108094468 108109759 + Tanc2 protein_coding processed_transcript MGP_WSBEiJ_T0009623.1 MGP_WSBEiJ_G0007780.1 mouse_genomes_project 11 123172910 123173008 - Mir338 miRNA miRNA MGP_WSBEiJ_T0032445.1 MGP_WSBEiJ_G0018698.1 mouse_genomes_project 11 112545809 112616523 - MGP_WSBEiJ_P0032445 Abca9 protein_coding protein_coding MGP_WSBEiJ_T0032446.1 MGP_WSBEiJ_G0018698.1 mouse_genomes_project 11 112604072 112616382 - Abca9 protein_coding processed_transcript MGP_WSBEiJ_T0032432.1 MGP_WSBEiJ_G0018695.1 mouse_genomes_project 11 112207275 112251238 - MGP_WSBEiJ_P0032432 1700012B07Rik protein_coding protein_coding MGP_WSBEiJ_T0032433.1 MGP_WSBEiJ_G0018695.1 mouse_genomes_project 11 112213478 112251214 - MGP_WSBEiJ_P0032433 1700012B07Rik protein_coding protein_coding MGP_WSBEiJ_T0032434.1 MGP_WSBEiJ_G0018695.1 mouse_genomes_project 11 112213519 112236005 - MGP_WSBEiJ_P0032434 1700012B07Rik protein_coding protein_coding MGP_WSBEiJ_T0029135.1 MGP_WSBEiJ_G0017878.1 mouse_genomes_project 11 68751960 68754187 + MGP_WSBEiJ_P0029135 Tmem107 protein_coding protein_coding MGP_WSBEiJ_T0029136.1 MGP_WSBEiJ_G0017878.1 mouse_genomes_project 11 68751965 68754450 + MGP_WSBEiJ_P0029136 Tmem107 protein_coding protein_coding MGP_WSBEiJ_T0029137.1 MGP_WSBEiJ_G0017878.1 mouse_genomes_project 11 68751967 68753980 + Tmem107 protein_coding processed_transcript MGP_WSBEiJ_T0029138.1 MGP_WSBEiJ_G0017878.1 mouse_genomes_project 11 68752008 68752658 + Tmem107 protein_coding processed_transcript MGP_WSBEiJ_T0029139.1 MGP_WSBEiJ_G0017878.1 mouse_genomes_project 11 68752027 68754418 + Tmem107 protein_coding processed_transcript MGP_WSBEiJ_T0029140.1 MGP_WSBEiJ_G0017878.1 mouse_genomes_project 11 68752072 68754181 + Tmem107 protein_coding processed_transcript MGP_WSBEiJ_T0029141.1 MGP_WSBEiJ_G0017878.1 mouse_genomes_project 11 68752090 68753973 + Tmem107 protein_coding processed_transcript MGP_WSBEiJ_T0029142.1 MGP_WSBEiJ_G0017878.1 mouse_genomes_project 11 68752456 68753717 + Tmem107 protein_coding processed_transcript MGP_WSBEiJ_T0012399.1 MGP_WSBEiJ_G0010529.1 mouse_genomes_project 11 73437110 73437497 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030471.1 MGP_WSBEiJ_G0018200.1 mouse_genomes_project 11 83752588 83758410 + MGP_WSBEiJ_P0030471 Slfn1 protein_coding protein_coding MGP_WSBEiJ_T0012373.1 MGP_WSBEiJ_G0010503.1 mouse_genomes_project 11 61659972 61660273 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028398.1 MGP_WSBEiJ_G0017685.1 mouse_genomes_project 11 53741457 53748583 + MGP_WSBEiJ_P0028398 Gpx3 protein_coding protein_coding MGP_WSBEiJ_T0028399.1 MGP_WSBEiJ_G0017685.1 mouse_genomes_project 11 53741776 53749384 + MGP_WSBEiJ_P0028399 Gpx3 protein_coding protein_coding MGP_WSBEiJ_T0028400.1 MGP_WSBEiJ_G0017685.1 mouse_genomes_project 11 53741930 53748541 + MGP_WSBEiJ_P0028400 Gpx3 protein_coding protein_coding MGP_WSBEiJ_T0012367.1 MGP_WSBEiJ_G0010497.1 mouse_genomes_project 11 60401229 60401946 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033240.1 MGP_WSBEiJ_G0018856.1 mouse_genomes_project 11 123631854 123633819 - MGP_WSBEiJ_P0033240 Oxld1 protein_coding protein_coding MGP_WSBEiJ_T0033241.1 MGP_WSBEiJ_G0018856.1 mouse_genomes_project 11 123632133 123633687 - MGP_WSBEiJ_P0033241 Oxld1 protein_coding protein_coding MGP_WSBEiJ_T0032274.1 MGP_WSBEiJ_G0018663.1 mouse_genomes_project 11 108607822 108718147 - MGP_WSBEiJ_P0032274 Ern1 protein_coding protein_coding MGP_WSBEiJ_T0032275.1 MGP_WSBEiJ_G0018663.1 mouse_genomes_project 11 108610637 108718203 - Ern1 protein_coding processed_transcript MGP_WSBEiJ_T0032276.1 MGP_WSBEiJ_G0018663.1 mouse_genomes_project 11 108626933 108718187 - MGP_WSBEiJ_P0032276 Ern1 protein_coding protein_coding MGP_WSBEiJ_T0032277.1 MGP_WSBEiJ_G0018663.1 mouse_genomes_project 11 108649653 108718159 - MGP_WSBEiJ_P0032277 Ern1 protein_coding protein_coding MGP_WSBEiJ_T0032278.1 MGP_WSBEiJ_G0018663.1 mouse_genomes_project 11 108673939 108718154 - MGP_WSBEiJ_P0032278 Ern1 protein_coding protein_coding MGP_WSBEiJ_T0012492.1 MGP_WSBEiJ_G0010622.1 mouse_genomes_project 11 114147470 114147960 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027081.1 MGP_WSBEiJ_G0017357.1 mouse_genomes_project 11 1606102 1643941 + MGP_WSBEiJ_P0027081 Zmat5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0027082.1 MGP_WSBEiJ_G0017357.1 mouse_genomes_project 11 1606129 1643875 + Zmat5 protein_coding processed_transcript MGP_WSBEiJ_T0027083.1 MGP_WSBEiJ_G0017357.1 mouse_genomes_project 11 1633556 1637503 + Zmat5 protein_coding processed_transcript MGP_WSBEiJ_T0028566.1 MGP_WSBEiJ_G0017752.1 mouse_genomes_project 11 58371323 58374633 + MGP_WSBEiJ_P0028566 Mrpl55 protein_coding protein_coding MGP_WSBEiJ_T0028567.1 MGP_WSBEiJ_G0017752.1 mouse_genomes_project 11 58371326 58374594 + MGP_WSBEiJ_P0028567 Mrpl55 protein_coding protein_coding MGP_WSBEiJ_T0028568.1 MGP_WSBEiJ_G0017752.1 mouse_genomes_project 11 58371329 58374840 + MGP_WSBEiJ_P0028568 Mrpl55 protein_coding protein_coding MGP_WSBEiJ_T0028569.1 MGP_WSBEiJ_G0017752.1 mouse_genomes_project 11 58371342 58374708 + MGP_WSBEiJ_P0028569 Mrpl55 protein_coding protein_coding MGP_WSBEiJ_T0028570.1 MGP_WSBEiJ_G0017752.1 mouse_genomes_project 11 58371375 58374594 + MGP_WSBEiJ_P0028570 Mrpl55 protein_coding protein_coding MGP_WSBEiJ_T0012460.1 MGP_WSBEiJ_G0010590.1 mouse_genomes_project 11 101517720 101517888 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029237.1 MGP_WSBEiJ_G0017903.1 mouse_genomes_project 11 69376536 69378383 + MGP_WSBEiJ_P0029237 Sat2 protein_coding protein_coding MGP_WSBEiJ_T0029238.1 MGP_WSBEiJ_G0017903.1 mouse_genomes_project 11 69376564 69377971 + Sat2 protein_coding retained_intron MGP_WSBEiJ_T0029239.1 MGP_WSBEiJ_G0017903.1 mouse_genomes_project 11 69376564 69378383 + MGP_WSBEiJ_P0029239 Sat2 protein_coding protein_coding MGP_WSBEiJ_T0031684.1 MGP_WSBEiJ_G0018539.1 mouse_genomes_project 11 103049028 103057821 + Cntnap1 protein_coding processed_transcript MGP_WSBEiJ_T0031686.1 MGP_WSBEiJ_G0018539.1 mouse_genomes_project 11 103055557 103072866 + MGP_WSBEiJ_P0031686 Cntnap1 protein_coding protein_coding MGP_WSBEiJ_T0028039.1 MGP_WSBEiJ_G0017600.1 mouse_genomes_project 11 48107496 48130278 + Flt4 protein_coding processed_transcript MGP_WSBEiJ_T0028040.1 MGP_WSBEiJ_G0017600.1 mouse_genomes_project 11 48107496 48159185 + MGP_WSBEiJ_P0028040 Flt4 protein_coding protein_coding MGP_WSBEiJ_T0016579.1 MGP_WSBEiJ_G0014578.1 mouse_genomes_project 11 20966117 20966892 - Gm12060 processed_transcript processed_transcript MGP_WSBEiJ_T0097693.1 MGP_WSBEiJ_G0036356.1 mouse_genomes_project 11 52110441 52110548 + Gm25930 snRNA snRNA MGP_WSBEiJ_T0003051.1 MGP_WSBEiJ_G0002842.1 mouse_genomes_project 11 9000422 9019316 + 1700042O10Rik antisense antisense MGP_WSBEiJ_T0016639.1 MGP_WSBEiJ_G0014611.1 mouse_genomes_project 11 95908768 95919163 + Gm11542 processed_transcript processed_transcript MGP_WSBEiJ_T0031493.1 MGP_WSBEiJ_G0018480.1 mouse_genomes_project 11 101621325 101622051 - MGP_WSBEiJ_P0031493 Krtap4-16 protein_coding protein_coding MGP_WSBEiJ_T0003240.1 MGP_WSBEiJ_G0002998.1 mouse_genomes_project 11 108166113 108186795 - Gm11651 antisense antisense MGP_WSBEiJ_T0003241.1 MGP_WSBEiJ_G0002998.1 mouse_genomes_project 11 108172160 108186767 - Gm11651 antisense antisense MGP_WSBEiJ_T0031345.1 MGP_WSBEiJ_G0018418.1 mouse_genomes_project 11 99999211 100027507 + MGP_WSBEiJ_P0031345 Erbb2 protein_coding protein_coding MGP_WSBEiJ_T0031346.1 MGP_WSBEiJ_G0018418.1 mouse_genomes_project 11 99999234 100026868 + Erbb2 protein_coding processed_transcript MGP_WSBEiJ_T0031347.1 MGP_WSBEiJ_G0018418.1 mouse_genomes_project 11 100015695 100016188 + Erbb2 protein_coding processed_transcript MGP_WSBEiJ_T0029479.1 MGP_WSBEiJ_G0017955.1 mouse_genomes_project 11 70203441 70221740 - MGP_WSBEiJ_P0029479 protein_coding protein_coding MGP_WSBEiJ_T0029480.1 MGP_WSBEiJ_G0017955.1 mouse_genomes_project 11 70214329 70221743 - MGP_WSBEiJ_P0029480 protein_coding protein_coding MGP_WSBEiJ_T0003099.1 MGP_WSBEiJ_G0002884.1 mouse_genomes_project 11 54398431 54412563 + Gm12236 antisense antisense MGP_WSBEiJ_T0003237.1 MGP_WSBEiJ_G0002995.1 mouse_genomes_project 11 106371467 106381286 - Gm11659 antisense antisense MGP_WSBEiJ_T0011116.1 MGP_WSBEiJ_G0009273.1 mouse_genomes_project 11 97594358 97594438 - Gm27898 misc_RNA misc_RNA MGP_WSBEiJ_T0012252.1 MGP_WSBEiJ_G0010382.1 mouse_genomes_project 11 17404142 17404365 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016591.1 MGP_WSBEiJ_G0014587.1 mouse_genomes_project 11 56755923 56762348 - 2010001A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016592.1 MGP_WSBEiJ_G0014587.1 mouse_genomes_project 11 56755943 56762345 - 2010001A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016593.1 MGP_WSBEiJ_G0014587.1 mouse_genomes_project 11 56756028 56762329 - 2010001A14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0097720.1 MGP_WSBEiJ_G0036383.1 mouse_genomes_project 11 87260547 87260653 - Gm26439 snRNA snRNA MGP_WSBEiJ_T0028401.1 MGP_WSBEiJ_G0017686.1 mouse_genomes_project 11 53749788 53795391 - MGP_WSBEiJ_P0028401 Tnip1 protein_coding protein_coding MGP_WSBEiJ_T0028402.1 MGP_WSBEiJ_G0017686.1 mouse_genomes_project 11 53749793 53795366 - Tnip1 protein_coding processed_transcript MGP_WSBEiJ_T0028403.1 MGP_WSBEiJ_G0017686.1 mouse_genomes_project 11 53749793 53802172 - MGP_WSBEiJ_P0028403 Tnip1 protein_coding protein_coding MGP_WSBEiJ_T0028404.1 MGP_WSBEiJ_G0017686.1 mouse_genomes_project 11 53757617 53760082 - Tnip1 protein_coding retained_intron MGP_WSBEiJ_T0028405.1 MGP_WSBEiJ_G0017686.1 mouse_genomes_project 11 53765706 53795384 - MGP_WSBEiJ_P0028405 Tnip1 protein_coding protein_coding MGP_WSBEiJ_T0028406.1 MGP_WSBEiJ_G0017686.1 mouse_genomes_project 11 53773015 53795309 - MGP_WSBEiJ_P0028406 Tnip1 protein_coding protein_coding MGP_WSBEiJ_T0028407.1 MGP_WSBEiJ_G0017686.1 mouse_genomes_project 11 53779540 53795349 - Tnip1 protein_coding processed_transcript MGP_WSBEiJ_T0028408.1 MGP_WSBEiJ_G0017686.1 mouse_genomes_project 11 53779594 53802171 - Tnip1 protein_coding processed_transcript MGP_WSBEiJ_T0029182.1 MGP_WSBEiJ_G0017889.1 mouse_genomes_project 11 69058653 69060467 + MGP_WSBEiJ_P0029182 Trappc1 protein_coding protein_coding MGP_WSBEiJ_T0029183.1 MGP_WSBEiJ_G0017889.1 mouse_genomes_project 11 69058736 69060467 + MGP_WSBEiJ_P0029183 Trappc1 protein_coding protein_coding MGP_WSBEiJ_T0029184.1 MGP_WSBEiJ_G0017889.1 mouse_genomes_project 11 69058748 69060467 + MGP_WSBEiJ_P0029184 Trappc1 protein_coding protein_coding MGP_WSBEiJ_T0029185.1 MGP_WSBEiJ_G0017889.1 mouse_genomes_project 11 69058830 69060467 + MGP_WSBEiJ_P0029185 Trappc1 protein_coding protein_coding MGP_WSBEiJ_T0029186.1 MGP_WSBEiJ_G0017889.1 mouse_genomes_project 11 69059111 69059906 + Trappc1 protein_coding processed_transcript MGP_WSBEiJ_T0029433.1 MGP_WSBEiJ_G0017945.1 mouse_genomes_project 11 69960070 69964600 + MGP_WSBEiJ_P0029433 Clec10a protein_coding protein_coding MGP_WSBEiJ_T0029434.1 MGP_WSBEiJ_G0017945.1 mouse_genomes_project 11 69960082 69964600 + MGP_WSBEiJ_P0029434 Clec10a protein_coding protein_coding MGP_WSBEiJ_T0029435.1 MGP_WSBEiJ_G0017945.1 mouse_genomes_project 11 69960146 69962154 + MGP_WSBEiJ_P0029435 Clec10a protein_coding protein_coding MGP_WSBEiJ_T0029436.1 MGP_WSBEiJ_G0017945.1 mouse_genomes_project 11 69961152 69961462 + MGP_WSBEiJ_P0029436 Clec10a protein_coding protein_coding MGP_WSBEiJ_T0029437.1 MGP_WSBEiJ_G0017945.1 mouse_genomes_project 11 69961401 69964610 + MGP_WSBEiJ_P0029437 Clec10a protein_coding protein_coding MGP_WSBEiJ_T0030837.1 MGP_WSBEiJ_G0018295.1 mouse_genomes_project 11 91069647 91077323 + MGP_WSBEiJ_P0030837 Tmem100 protein_coding protein_coding MGP_WSBEiJ_T0031461.1 MGP_WSBEiJ_G0018450.1 mouse_genomes_project 11 101153326 101159897 - MGP_WSBEiJ_P0031461 Krt12 protein_coding protein_coding MGP_WSBEiJ_T0012317.1 MGP_WSBEiJ_G0010447.1 mouse_genomes_project 11 39844618 39844950 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030741.1 MGP_WSBEiJ_G0018268.1 mouse_genomes_project 11 88489673 88534878 + MGP_WSBEiJ_P0030741 protein_coding protein_coding MGP_WSBEiJ_T0027127.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 1994092 2026785 - MGP_WSBEiJ_P0027127 protein_coding protein_coding MGP_WSBEiJ_T0027128.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 1994101 2026586 - MGP_WSBEiJ_P0027128 protein_coding protein_coding MGP_WSBEiJ_T0027129.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 1994299 2026561 - MGP_WSBEiJ_P0027129 protein_coding protein_coding MGP_WSBEiJ_T0027130.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 1994376 1996520 - protein_coding processed_transcript MGP_WSBEiJ_T0027131.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 1997380 2005535 - protein_coding processed_transcript MGP_WSBEiJ_T0027132.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 1997690 2004534 - protein_coding processed_transcript MGP_WSBEiJ_T0027133.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 1997793 2005906 - protein_coding processed_transcript MGP_WSBEiJ_T0027134.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 1997793 2008347 - protein_coding processed_transcript MGP_WSBEiJ_T0027135.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 2006424 2026585 - MGP_WSBEiJ_P0027135 protein_coding protein_coding MGP_WSBEiJ_T0027136.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 2008028 2013359 - protein_coding processed_transcript MGP_WSBEiJ_T0027137.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 2017785 2026615 - MGP_WSBEiJ_P0027137 protein_coding protein_coding MGP_WSBEiJ_T0027138.1 MGP_WSBEiJ_G0017366.1 mouse_genomes_project 11 2020858 2026586 - protein_coding processed_transcript MGP_WSBEiJ_T0031498.1 MGP_WSBEiJ_G0018485.1 mouse_genomes_project 11 101733516 101734665 + MGP_WSBEiJ_P0031498 Krtap9-5 protein_coding protein_coding MGP_WSBEiJ_T0033432.1 MGP_WSBEiJ_G0018892.1 mouse_genomes_project 11 124273822 124282576 - MGP_WSBEiJ_P0033432 Sectm1a protein_coding protein_coding MGP_WSBEiJ_T0033433.1 MGP_WSBEiJ_G0018892.1 mouse_genomes_project 11 124273822 124282658 - MGP_WSBEiJ_P0033433 Sectm1a protein_coding protein_coding MGP_WSBEiJ_T0033434.1 MGP_WSBEiJ_G0018892.1 mouse_genomes_project 11 124274332 124282573 - MGP_WSBEiJ_P0033434 Sectm1a protein_coding protein_coding MGP_WSBEiJ_T0033435.1 MGP_WSBEiJ_G0018892.1 mouse_genomes_project 11 124274350 124282567 - MGP_WSBEiJ_P0033435 Sectm1a protein_coding protein_coding MGP_WSBEiJ_T0033436.1 MGP_WSBEiJ_G0018892.1 mouse_genomes_project 11 124275451 124282562 - Sectm1a protein_coding processed_transcript MGP_WSBEiJ_T0030794.1 MGP_WSBEiJ_G0018280.1 mouse_genomes_project 11 89034741 89036790 + Cuedc1 protein_coding processed_transcript MGP_WSBEiJ_T0030795.1 MGP_WSBEiJ_G0018280.1 mouse_genomes_project 11 89035971 89128620 + Cuedc1 protein_coding retained_intron MGP_WSBEiJ_T0030796.1 MGP_WSBEiJ_G0018280.1 mouse_genomes_project 11 89105896 89138993 + MGP_WSBEiJ_P0030796 Cuedc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030797.1 MGP_WSBEiJ_G0018280.1 mouse_genomes_project 11 89112903 89138989 + MGP_WSBEiJ_P0030797 Cuedc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030798.1 MGP_WSBEiJ_G0018280.1 mouse_genomes_project 11 89125573 89126551 + Cuedc1 protein_coding retained_intron MGP_WSBEiJ_T0030799.1 MGP_WSBEiJ_G0018280.1 mouse_genomes_project 11 89129904 89132724 + Cuedc1 protein_coding processed_transcript MGP_WSBEiJ_T0030800.1 MGP_WSBEiJ_G0018280.1 mouse_genomes_project 11 89131724 89137862 + Cuedc1 protein_coding retained_intron MGP_WSBEiJ_T0030751.1 MGP_WSBEiJ_G0018270.1 mouse_genomes_project 11 88623140 88630766 + MGP_WSBEiJ_P0030751 Supt4a protein_coding unknown_likely_coding MGP_WSBEiJ_T0096922.1 MGP_WSBEiJ_G0035603.1 mouse_genomes_project 11 119225872 119225988 - n-R5s74 rRNA rRNA MGP_WSBEiJ_T0030642.1 MGP_WSBEiJ_G0018246.1 mouse_genomes_project 11 86853934 87018021 - MGP_WSBEiJ_P0030642 Brip1 protein_coding protein_coding MGP_WSBEiJ_T0030643.1 MGP_WSBEiJ_G0018246.1 mouse_genomes_project 11 87009864 87017992 - Brip1 protein_coding processed_transcript MGP_WSBEiJ_T0030644.1 MGP_WSBEiJ_G0018246.1 mouse_genomes_project 11 87010530 87017994 - Brip1 protein_coding processed_transcript MGP_WSBEiJ_T0030313.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79746356 79753023 + Nf1 protein_coding processed_transcript MGP_WSBEiJ_T0030314.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79746455 79997044 + MGP_WSBEiJ_P0030314 Nf1 protein_coding protein_coding MGP_WSBEiJ_T0030315.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79746488 80000579 + MGP_WSBEiJ_P0030315 Nf1 protein_coding protein_coding MGP_WSBEiJ_T0030316.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79746550 79846256 + Nf1 protein_coding retained_intron MGP_WSBEiJ_T0030317.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79747854 79892151 + MGP_WSBEiJ_P0030317 Nf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030318.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79747854 79891298 + MGP_WSBEiJ_P0030318 Nf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030319.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79863560 79888703 + Nf1 protein_coding processed_transcript MGP_WSBEiJ_T0030320.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79863560 79888703 + Nf1 protein_coding processed_transcript MGP_WSBEiJ_T0030330.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79955049 79988227 + Nf1 protein_coding retained_intron MGP_WSBEiJ_T0030331.1 MGP_WSBEiJ_G0018157.1 mouse_genomes_project 11 79964465 79998150 + MGP_WSBEiJ_P0030331 Nf1 protein_coding protein_coding MGP_WSBEiJ_T0030483.1 MGP_WSBEiJ_G0018205.1 mouse_genomes_project 11 83965351 83999790 + MGP_WSBEiJ_P0030483 Ap2b1 protein_coding protein_coding MGP_WSBEiJ_T0030484.1 MGP_WSBEiJ_G0018205.1 mouse_genomes_project 11 83968858 84074026 + MGP_WSBEiJ_P0030484 Ap2b1 protein_coding protein_coding MGP_WSBEiJ_T0030485.1 MGP_WSBEiJ_G0018205.1 mouse_genomes_project 11 83969078 84011320 + Ap2b1 protein_coding retained_intron MGP_WSBEiJ_T0030486.1 MGP_WSBEiJ_G0018205.1 mouse_genomes_project 11 83969109 84067589 + MGP_WSBEiJ_P0030486 Ap2b1 protein_coding protein_coding MGP_WSBEiJ_T0030487.1 MGP_WSBEiJ_G0018205.1 mouse_genomes_project 11 83969149 84072003 + MGP_WSBEiJ_P0030487 Ap2b1 protein_coding protein_coding MGP_WSBEiJ_T0030488.1 MGP_WSBEiJ_G0018205.1 mouse_genomes_project 11 83969324 83983256 + MGP_WSBEiJ_P0030488 Ap2b1 protein_coding protein_coding MGP_WSBEiJ_T0030489.1 MGP_WSBEiJ_G0018205.1 mouse_genomes_project 11 83974631 84071635 + MGP_WSBEiJ_P0030489 Ap2b1 protein_coding protein_coding MGP_WSBEiJ_T0098896.1 MGP_WSBEiJ_G0037559.1 mouse_genomes_project 11 3635141 3635277 - Snora5c snoRNA snoRNA MGP_WSBEiJ_T0006257.1 MGP_WSBEiJ_G0005218.1 mouse_genomes_project 11 114671186 114695762 + Gm11680 lincRNA lincRNA MGP_WSBEiJ_T0031012.1 MGP_WSBEiJ_G0018334.1 mouse_genomes_project 11 96368079 96394532 - MGP_WSBEiJ_P0031012 Itga3 protein_coding protein_coding MGP_WSBEiJ_T0031013.1 MGP_WSBEiJ_G0018334.1 mouse_genomes_project 11 96368079 96402022 - MGP_WSBEiJ_P0031013 Itga3 protein_coding protein_coding MGP_WSBEiJ_T0031014.1 MGP_WSBEiJ_G0018334.1 mouse_genomes_project 11 96368079 96402109 - MGP_WSBEiJ_P0031014 Itga3 protein_coding protein_coding MGP_WSBEiJ_T0031015.1 MGP_WSBEiJ_G0018334.1 mouse_genomes_project 11 96376858 96379637 - Itga3 protein_coding retained_intron MGP_WSBEiJ_T0031016.1 MGP_WSBEiJ_G0018334.1 mouse_genomes_project 11 96381706 96385712 - Itga3 protein_coding retained_intron MGP_WSBEiJ_T0031017.1 MGP_WSBEiJ_G0018334.1 mouse_genomes_project 11 96387627 96402105 - MGP_WSBEiJ_P0031017 Itga3 protein_coding protein_coding MGP_WSBEiJ_T0012445.1 MGP_WSBEiJ_G0010575.1 mouse_genomes_project 11 93896018 93896599 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032393.1 MGP_WSBEiJ_G0018686.1 mouse_genomes_project 11 111606649 111683807 - MGP_WSBEiJ_P0032393 Rgs9 protein_coding protein_coding MGP_WSBEiJ_T0032394.1 MGP_WSBEiJ_G0018686.1 mouse_genomes_project 11 111606655 111632265 - MGP_WSBEiJ_P0032394 Rgs9 protein_coding protein_coding MGP_WSBEiJ_T0032395.1 MGP_WSBEiJ_G0018686.1 mouse_genomes_project 11 111616342 111683744 - MGP_WSBEiJ_P0032395 Rgs9 protein_coding protein_coding MGP_WSBEiJ_T0032396.1 MGP_WSBEiJ_G0018686.1 mouse_genomes_project 11 111621630 111629079 - Rgs9 protein_coding processed_transcript MGP_WSBEiJ_T0032397.1 MGP_WSBEiJ_G0018686.1 mouse_genomes_project 11 111639374 111683784 - MGP_WSBEiJ_P0032397 Rgs9 protein_coding protein_coding MGP_WSBEiJ_T0031519.1 MGP_WSBEiJ_G0018499.1 mouse_genomes_project 11 101998561 102001436 - Krt14 protein_coding processed_transcript MGP_WSBEiJ_T0031520.1 MGP_WSBEiJ_G0018499.1 mouse_genomes_project 11 101998561 102002909 - MGP_WSBEiJ_P0031520 Krt14 protein_coding protein_coding MGP_WSBEiJ_T0096908.1 MGP_WSBEiJ_G0035589.1 mouse_genomes_project 11 21037398 21037515 - Gm23114 rRNA rRNA MGP_WSBEiJ_T0003245.1 MGP_WSBEiJ_G0003002.1 mouse_genomes_project 11 109296240 109296467 + antisense antisense MGP_WSBEiJ_T0028005.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47641369 47657075 + MGP_WSBEiJ_P0028005 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028006.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47641373 47653798 + MGP_WSBEiJ_P0028006 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028007.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47641562 47652154 + Zfp62 protein_coding processed_transcript MGP_WSBEiJ_T0028008.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47641562 47653428 + Zfp62 protein_coding retained_intron MGP_WSBEiJ_T0028009.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47641562 47653629 + MGP_WSBEiJ_P0028009 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028010.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47641575 47657338 + MGP_WSBEiJ_P0028010 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028011.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47641583 47654188 + MGP_WSBEiJ_P0028011 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028012.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47641811 47653695 + MGP_WSBEiJ_P0028012 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028013.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47642358 47656281 + MGP_WSBEiJ_P0028013 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028014.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47651205 47657331 + MGP_WSBEiJ_P0028014 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028015.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47652109 47653841 + MGP_WSBEiJ_P0028015 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0028016.1 MGP_WSBEiJ_G0017589.1 mouse_genomes_project 11 47653066 47657331 + MGP_WSBEiJ_P0028016 Zfp62 protein_coding protein_coding MGP_WSBEiJ_T0030420.1 MGP_WSBEiJ_G0018187.1 mouse_genomes_project 11 82765483 82898571 - Ccl1 protein_coding processed_transcript MGP_WSBEiJ_T0030421.1 MGP_WSBEiJ_G0018187.1 mouse_genomes_project 11 82765483 82768599 - MGP_WSBEiJ_P0030421 Ccl1 protein_coding protein_coding MGP_WSBEiJ_T0030422.1 MGP_WSBEiJ_G0018187.1 mouse_genomes_project 11 82765485 82768599 - MGP_WSBEiJ_P0030422 Ccl1 protein_coding protein_coding MGP_WSBEiJ_T0031766.1 MGP_WSBEiJ_G0018558.1 mouse_genomes_project 11 103372023 103380668 - MGP_WSBEiJ_P0031766 Vat1 protein_coding protein_coding MGP_WSBEiJ_T0031613.1 MGP_WSBEiJ_G0018523.1 mouse_genomes_project 11 102599965 102601825 - MGP_WSBEiJ_P0031613 Hcrt protein_coding protein_coding MGP_WSBEiJ_T0031614.1 MGP_WSBEiJ_G0018523.1 mouse_genomes_project 11 102600587 102601828 - MGP_WSBEiJ_P0031614 Hcrt protein_coding protein_coding MGP_WSBEiJ_T0029632.1 MGP_WSBEiJ_G0017982.1 mouse_genomes_project 11 70829497 70836197 - MGP_WSBEiJ_P0029632 C1qbp protein_coding protein_coding MGP_WSBEiJ_T0029633.1 MGP_WSBEiJ_G0017982.1 mouse_genomes_project 11 70829509 70830533 - C1qbp protein_coding retained_intron MGP_WSBEiJ_T0029634.1 MGP_WSBEiJ_G0017982.1 mouse_genomes_project 11 70834166 70836178 - C1qbp protein_coding retained_intron MGP_WSBEiJ_T0096907.1 MGP_WSBEiJ_G0035588.1 mouse_genomes_project 11 20442163 20442263 - Gm23740 rRNA rRNA MGP_WSBEiJ_T0003194.1 MGP_WSBEiJ_G0002960.1 mouse_genomes_project 11 96719578 96728733 - Gm29477 antisense antisense MGP_WSBEiJ_T0028267.1 MGP_WSBEiJ_G0017654.1 mouse_genomes_project 11 52155771 52158649 - MGP_WSBEiJ_P0028267 Uqcrq protein_coding protein_coding MGP_WSBEiJ_T0028268.1 MGP_WSBEiJ_G0017654.1 mouse_genomes_project 11 52156790 52158653 - Uqcrq protein_coding processed_transcript MGP_WSBEiJ_T0028269.1 MGP_WSBEiJ_G0017654.1 mouse_genomes_project 11 52156790 52158649 - MGP_WSBEiJ_P0028269 Uqcrq protein_coding protein_coding MGP_WSBEiJ_T0028270.1 MGP_WSBEiJ_G0017654.1 mouse_genomes_project 11 52156790 52158256 - MGP_WSBEiJ_P0028270 Uqcrq protein_coding protein_coding MGP_WSBEiJ_T0003088.1 MGP_WSBEiJ_G0002875.1 mouse_genomes_project 11 51805236 51817177 - Gm11186 antisense antisense MGP_WSBEiJ_T0012205.1 MGP_WSBEiJ_G0010335.1 mouse_genomes_project 11 460002 460374 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027833.1 MGP_WSBEiJ_G0017533.1 mouse_genomes_project 11 40195470 40252048 - MGP_WSBEiJ_P0027833 Gabra1 protein_coding protein_coding MGP_WSBEiJ_T0027834.1 MGP_WSBEiJ_G0017533.1 mouse_genomes_project 11 40195470 40251281 - MGP_WSBEiJ_P0027834 Gabra1 protein_coding protein_coding MGP_WSBEiJ_T0027835.1 MGP_WSBEiJ_G0017533.1 mouse_genomes_project 11 40200087 40249071 - MGP_WSBEiJ_P0027835 Gabra1 protein_coding protein_coding MGP_WSBEiJ_T0027836.1 MGP_WSBEiJ_G0017533.1 mouse_genomes_project 11 40221519 40249184 - MGP_WSBEiJ_P0027836 Gabra1 protein_coding protein_coding MGP_WSBEiJ_T0027837.1 MGP_WSBEiJ_G0017533.1 mouse_genomes_project 11 40244557 40252048 - MGP_WSBEiJ_P0027837 Gabra1 protein_coding protein_coding MGP_WSBEiJ_T0027838.1 MGP_WSBEiJ_G0017533.1 mouse_genomes_project 11 40246536 40251578 - Gabra1 protein_coding processed_transcript MGP_WSBEiJ_T0027839.1 MGP_WSBEiJ_G0017533.1 mouse_genomes_project 11 40248787 40252028 - MGP_WSBEiJ_P0027839 Gabra1 protein_coding protein_coding MGP_WSBEiJ_T0012447.1 MGP_WSBEiJ_G0010577.1 mouse_genomes_project 11 94866081 94866551 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031710.1 MGP_WSBEiJ_G0018544.1 mouse_genomes_project 11 103147398 103168554 + MGP_WSBEiJ_P0031710 Wnk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031711.1 MGP_WSBEiJ_G0018544.1 mouse_genomes_project 11 103147429 103168554 + MGP_WSBEiJ_P0031711 Wnk4 protein_coding protein_coding MGP_WSBEiJ_T0031712.1 MGP_WSBEiJ_G0018544.1 mouse_genomes_project 11 103147486 103168419 + MGP_WSBEiJ_P0031712 Wnk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031713.1 MGP_WSBEiJ_G0018544.1 mouse_genomes_project 11 103153215 103163461 + MGP_WSBEiJ_P0031713 Wnk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031714.1 MGP_WSBEiJ_G0018544.1 mouse_genomes_project 11 103167790 103168551 + MGP_WSBEiJ_P0031714 Wnk4 protein_coding protein_coding MGP_WSBEiJ_T0003041.1 MGP_WSBEiJ_G0002835.1 mouse_genomes_project 11 1515191 1522579 - Gm11961 antisense antisense MGP_WSBEiJ_T0003042.1 MGP_WSBEiJ_G0002835.1 mouse_genomes_project 11 1520188 1524821 - Gm11961 antisense antisense MGP_WSBEiJ_T0028518.1 MGP_WSBEiJ_G0017731.1 mouse_genomes_project 11 57738938 57739904 + MGP_WSBEiJ_P0028518 protein_coding protein_coding MGP_WSBEiJ_T0032257.1 MGP_WSBEiJ_G0018657.1 mouse_genomes_project 11 108482862 108496676 + MGP_WSBEiJ_P0032257 Tcam1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0032258.1 MGP_WSBEiJ_G0018657.1 mouse_genomes_project 11 108486252 108497780 + MGP_WSBEiJ_P0032258 Tcam1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031311.1 MGP_WSBEiJ_G0018410.1 mouse_genomes_project 11 99713565 99756995 - MGP_WSBEiJ_P0031311 Med1 protein_coding protein_coding MGP_WSBEiJ_T0031312.1 MGP_WSBEiJ_G0018410.1 mouse_genomes_project 11 99713566 99757028 - MGP_WSBEiJ_P0031312 Med1 protein_coding protein_coding MGP_WSBEiJ_T0031313.1 MGP_WSBEiJ_G0018410.1 mouse_genomes_project 11 99714429 99725413 - Med1 protein_coding processed_transcript MGP_WSBEiJ_T0031314.1 MGP_WSBEiJ_G0018410.1 mouse_genomes_project 11 99715687 99756690 - MGP_WSBEiJ_P0031314 Med1 protein_coding protein_coding MGP_WSBEiJ_T0031315.1 MGP_WSBEiJ_G0018410.1 mouse_genomes_project 11 99719192 99722464 - Med1 protein_coding processed_transcript MGP_WSBEiJ_T0031316.1 MGP_WSBEiJ_G0018410.1 mouse_genomes_project 11 99730816 99741220 - Med1 protein_coding processed_transcript MGP_WSBEiJ_T0031317.1 MGP_WSBEiJ_G0018410.1 mouse_genomes_project 11 99731363 99757011 - Med1 protein_coding processed_transcript MGP_WSBEiJ_T0011119.1 MGP_WSBEiJ_G0009276.1 mouse_genomes_project 11 104474552 104474803 - Gm23563 misc_RNA misc_RNA MGP_WSBEiJ_T0029154.1 MGP_WSBEiJ_G0017881.1 mouse_genomes_project 11 68801064 68803600 - MGP_WSBEiJ_P0029154 9130213A22Rik protein_coding protein_coding MGP_WSBEiJ_T0028078.1 MGP_WSBEiJ_G0017609.1 mouse_genomes_project 11 48728965 48740398 - MGP_WSBEiJ_P0028078 Sqstm1 protein_coding protein_coding MGP_WSBEiJ_T0028079.1 MGP_WSBEiJ_G0017609.1 mouse_genomes_project 11 48729751 48740434 - MGP_WSBEiJ_P0028079 Sqstm1 protein_coding protein_coding MGP_WSBEiJ_T0028080.1 MGP_WSBEiJ_G0017609.1 mouse_genomes_project 11 48729766 48732554 - MGP_WSBEiJ_P0028080 Sqstm1 protein_coding protein_coding MGP_WSBEiJ_T0028081.1 MGP_WSBEiJ_G0017609.1 mouse_genomes_project 11 48730210 48740372 - MGP_WSBEiJ_P0028081 Sqstm1 protein_coding protein_coding MGP_WSBEiJ_T0028082.1 MGP_WSBEiJ_G0017609.1 mouse_genomes_project 11 48731911 48735707 - Sqstm1 protein_coding retained_intron MGP_WSBEiJ_T0028083.1 MGP_WSBEiJ_G0017609.1 mouse_genomes_project 11 48732042 48732718 - Sqstm1 protein_coding retained_intron MGP_WSBEiJ_T0028084.1 MGP_WSBEiJ_G0017609.1 mouse_genomes_project 11 48735285 48736926 - Sqstm1 protein_coding retained_intron MGP_WSBEiJ_T0031763.1 MGP_WSBEiJ_G0018557.1 mouse_genomes_project 11 103361715 103371977 + MGP_WSBEiJ_P0031763 Ifi35 protein_coding protein_coding MGP_WSBEiJ_T0031764.1 MGP_WSBEiJ_G0018557.1 mouse_genomes_project 11 103361752 103371404 + Ifi35 protein_coding retained_intron MGP_WSBEiJ_T0031765.1 MGP_WSBEiJ_G0018557.1 mouse_genomes_project 11 103361878 103371743 + MGP_WSBEiJ_P0031765 Ifi35 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012416.1 MGP_WSBEiJ_G0010546.1 mouse_genomes_project 11 79780599 79781573 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033333.1 MGP_WSBEiJ_G0018875.1 mouse_genomes_project 11 123840736 123847580 - MGP_WSBEiJ_P0033333 Notum protein_coding protein_coding MGP_WSBEiJ_T0033334.1 MGP_WSBEiJ_G0018875.1 mouse_genomes_project 11 123840736 123847803 - MGP_WSBEiJ_P0033334 Notum protein_coding protein_coding MGP_WSBEiJ_T0033335.1 MGP_WSBEiJ_G0018875.1 mouse_genomes_project 11 123840793 123845017 - Notum protein_coding retained_intron MGP_WSBEiJ_T0033336.1 MGP_WSBEiJ_G0018875.1 mouse_genomes_project 11 123844535 123848149 - MGP_WSBEiJ_P0033336 Notum protein_coding protein_coding MGP_WSBEiJ_T0096919.1 MGP_WSBEiJ_G0035600.1 mouse_genomes_project 11 91235750 91235869 - n-R5s72 rRNA rRNA MGP_WSBEiJ_T0028649.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59424258 59435741 - MGP_WSBEiJ_P0028649 Srebf1 protein_coding protein_coding MGP_WSBEiJ_T0028650.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59424260 59445827 - MGP_WSBEiJ_P0028650 Srebf1 protein_coding protein_coding MGP_WSBEiJ_T0028651.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59425301 59426212 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0028652.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59425634 59435694 - MGP_WSBEiJ_P0028652 Srebf1 protein_coding protein_coding MGP_WSBEiJ_T0028653.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59426535 59427387 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0028654.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59426537 59427796 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0028655.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59426972 59429029 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0028656.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59427830 59428660 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0028657.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59428272 59429462 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0028658.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59429360 59431289 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0028659.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59431135 59435621 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0028660.1 MGP_WSBEiJ_G0017774.1 mouse_genomes_project 11 59432178 59447804 - Srebf1 protein_coding processed_transcript MGP_WSBEiJ_T0030255.1 MGP_WSBEiJ_G0018140.1 mouse_genomes_project 11 78817275 78823522 + MGP_WSBEiJ_P0030255 Slc46a1 protein_coding protein_coding MGP_WSBEiJ_T0030256.1 MGP_WSBEiJ_G0018140.1 mouse_genomes_project 11 78817328 78823199 + MGP_WSBEiJ_P0030256 Slc46a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030257.1 MGP_WSBEiJ_G0018140.1 mouse_genomes_project 11 78821804 78823636 + Slc46a1 protein_coding retained_intron MGP_WSBEiJ_T0028600.1 MGP_WSBEiJ_G0017764.1 mouse_genomes_project 11 58782957 58784068 - MGP_WSBEiJ_P0028600 Olfr223 protein_coding protein_coding MGP_WSBEiJ_T0009513.1 MGP_WSBEiJ_G0007670.1 mouse_genomes_project 11 26397690 26397759 - Mir216c miRNA miRNA MGP_WSBEiJ_T0012440.1 MGP_WSBEiJ_G0010570.1 mouse_genomes_project 11 91580377 91580917 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097678.1 MGP_WSBEiJ_G0036341.1 mouse_genomes_project 11 15936554 15936665 + Gm23093 snRNA snRNA MGP_WSBEiJ_T0030603.1 MGP_WSBEiJ_G0018237.1 mouse_genomes_project 11 85704499 85714187 + MGP_WSBEiJ_P0030603 Car4 protein_coding protein_coding MGP_WSBEiJ_T0030604.1 MGP_WSBEiJ_G0018237.1 mouse_genomes_project 11 85704515 85710915 + Car4 protein_coding retained_intron MGP_WSBEiJ_T0030605.1 MGP_WSBEiJ_G0018237.1 mouse_genomes_project 11 85704517 85714426 + MGP_WSBEiJ_P0030605 Car4 protein_coding protein_coding MGP_WSBEiJ_T0030606.1 MGP_WSBEiJ_G0018237.1 mouse_genomes_project 11 85704540 85710285 + Car4 protein_coding processed_transcript MGP_WSBEiJ_T0030607.1 MGP_WSBEiJ_G0018237.1 mouse_genomes_project 11 85704554 85712945 + MGP_WSBEiJ_P0030607 Car4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030608.1 MGP_WSBEiJ_G0018237.1 mouse_genomes_project 11 85704833 85712609 + MGP_WSBEiJ_P0030608 Car4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009625.1 MGP_WSBEiJ_G0007782.1 mouse_genomes_project 11 123227717 123227829 - Gm25948 miRNA miRNA MGP_WSBEiJ_T0031656.1 MGP_WSBEiJ_G0018532.1 mouse_genomes_project 11 102954420 102958840 + MGP_WSBEiJ_P0031656 Coasy protein_coding protein_coding MGP_WSBEiJ_T0031657.1 MGP_WSBEiJ_G0018532.1 mouse_genomes_project 11 102954473 102957841 + Coasy protein_coding processed_transcript MGP_WSBEiJ_T0031658.1 MGP_WSBEiJ_G0018532.1 mouse_genomes_project 11 102954480 102958840 + MGP_WSBEiJ_P0031658 Coasy protein_coding protein_coding MGP_WSBEiJ_T0031659.1 MGP_WSBEiJ_G0018532.1 mouse_genomes_project 11 102955750 102957035 + Coasy protein_coding processed_transcript MGP_WSBEiJ_T0032942.1 MGP_WSBEiJ_G0018797.1 mouse_genomes_project 11 119786256 119789437 - MGP_WSBEiJ_P0032942 Srsf2 protein_coding protein_coding MGP_WSBEiJ_T0032943.1 MGP_WSBEiJ_G0018797.1 mouse_genomes_project 11 119786259 119788562 - Srsf2 protein_coding retained_intron MGP_WSBEiJ_T0032944.1 MGP_WSBEiJ_G0018797.1 mouse_genomes_project 11 119786261 119788429 - MGP_WSBEiJ_P0032944 Srsf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032945.1 MGP_WSBEiJ_G0018797.1 mouse_genomes_project 11 119786399 119789415 - MGP_WSBEiJ_P0032945 Srsf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032946.1 MGP_WSBEiJ_G0018797.1 mouse_genomes_project 11 119786407 119789415 - MGP_WSBEiJ_P0032946 Srsf2 protein_coding protein_coding MGP_WSBEiJ_T0032947.1 MGP_WSBEiJ_G0018797.1 mouse_genomes_project 11 119786461 119787914 - Srsf2 protein_coding processed_transcript MGP_WSBEiJ_T0027905.1 MGP_WSBEiJ_G0017553.1 mouse_genomes_project 11 44198705 44214613 - MGP_WSBEiJ_P0027905 Lsm11 protein_coding protein_coding MGP_WSBEiJ_T0027906.1 MGP_WSBEiJ_G0017553.1 mouse_genomes_project 11 44201633 44214613 - MGP_WSBEiJ_P0027906 Lsm11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006268.1 MGP_WSBEiJ_G0005225.1 mouse_genomes_project 11 116972617 116975088 + lincRNA lincRNA MGP_WSBEiJ_T0003104.1 MGP_WSBEiJ_G0002889.1 mouse_genomes_project 11 58017555 58019394 + Gm12256 antisense antisense MGP_WSBEiJ_T0029760.1 MGP_WSBEiJ_G0018013.1 mouse_genomes_project 11 73096261 73141118 + MGP_WSBEiJ_P0029760 Itgae protein_coding protein_coding MGP_WSBEiJ_T0029761.1 MGP_WSBEiJ_G0018013.1 mouse_genomes_project 11 73096261 73154406 + MGP_WSBEiJ_P0029761 Itgae protein_coding protein_coding MGP_WSBEiJ_T0032428.1 MGP_WSBEiJ_G0018694.1 mouse_genomes_project 11 112083630 112139807 - MGP_WSBEiJ_P0032428 Fam20a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032429.1 MGP_WSBEiJ_G0018694.1 mouse_genomes_project 11 112086807 112139784 - MGP_WSBEiJ_P0032429 Fam20a protein_coding protein_coding MGP_WSBEiJ_T0032430.1 MGP_WSBEiJ_G0018694.1 mouse_genomes_project 11 112087355 112090300 - Fam20a protein_coding retained_intron MGP_WSBEiJ_T0032431.1 MGP_WSBEiJ_G0018694.1 mouse_genomes_project 11 112088516 112096872 - Fam20a protein_coding retained_intron MGP_WSBEiJ_T0016649.1 MGP_WSBEiJ_G0014616.1 mouse_genomes_project 11 98485922 98491666 - Gm11532 processed_transcript processed_transcript MGP_WSBEiJ_T0028894.1 MGP_WSBEiJ_G0017819.1 mouse_genomes_project 11 61937898 61963698 + Trpv2 protein_coding processed_transcript MGP_WSBEiJ_T0028895.1 MGP_WSBEiJ_G0017819.1 mouse_genomes_project 11 61937950 61964367 + MGP_WSBEiJ_P0028895 Trpv2 protein_coding protein_coding MGP_WSBEiJ_T0028896.1 MGP_WSBEiJ_G0017819.1 mouse_genomes_project 11 61938959 61944685 + Trpv2 protein_coding processed_transcript MGP_WSBEiJ_T0028897.1 MGP_WSBEiJ_G0017819.1 mouse_genomes_project 11 61939537 61963698 + MGP_WSBEiJ_P0028897 Trpv2 protein_coding protein_coding MGP_WSBEiJ_T0028898.1 MGP_WSBEiJ_G0017819.1 mouse_genomes_project 11 61944647 61963698 + Trpv2 protein_coding processed_transcript MGP_WSBEiJ_T0012313.1 MGP_WSBEiJ_G0010443.1 mouse_genomes_project 11 38657119 38658328 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009605.1 MGP_WSBEiJ_G0007762.1 mouse_genomes_project 11 105056370 105056444 - Mir6931 miRNA miRNA MGP_WSBEiJ_T0027943.1 MGP_WSBEiJ_G0017566.1 mouse_genomes_project 11 44899953 44931089 - MGP_WSBEiJ_P0027943 Dppa1 protein_coding protein_coding MGP_WSBEiJ_T0027944.1 MGP_WSBEiJ_G0017566.1 mouse_genomes_project 11 44900891 44931089 - MGP_WSBEiJ_P0027944 Dppa1 protein_coding protein_coding MGP_WSBEiJ_T0027118.1 MGP_WSBEiJ_G0017364.1 mouse_genomes_project 11 1978678 1989692 - Gas2l1 protein_coding processed_transcript MGP_WSBEiJ_T0027119.1 MGP_WSBEiJ_G0017364.1 mouse_genomes_project 11 1979798 1989698 - MGP_WSBEiJ_P0027119 Gas2l1 protein_coding protein_coding MGP_WSBEiJ_T0027122.1 MGP_WSBEiJ_G0017364.1 mouse_genomes_project 11 1984769 1989725 - MGP_WSBEiJ_P0027122 Gas2l1 protein_coding protein_coding MGP_WSBEiJ_T0027123.1 MGP_WSBEiJ_G0017364.1 mouse_genomes_project 11 1984778 1989675 - MGP_WSBEiJ_P0027123 Gas2l1 protein_coding protein_coding MGP_WSBEiJ_T0027124.1 MGP_WSBEiJ_G0017364.1 mouse_genomes_project 11 1984867 1989250 - Gas2l1 protein_coding processed_transcript MGP_WSBEiJ_T0027125.1 MGP_WSBEiJ_G0017364.1 mouse_genomes_project 11 1988271 1989676 - MGP_WSBEiJ_P0027125 Gas2l1 protein_coding protein_coding MGP_WSBEiJ_T0027126.1 MGP_WSBEiJ_G0017364.1 mouse_genomes_project 11 1988815 1989692 - Gas2l1 protein_coding processed_transcript MGP_WSBEiJ_T0029716.1 MGP_WSBEiJ_G0018003.1 mouse_genomes_project 11 72433401 72473106 - MGP_WSBEiJ_P0029716 Spns2 protein_coding protein_coding MGP_WSBEiJ_T0029717.1 MGP_WSBEiJ_G0018003.1 mouse_genomes_project 11 72433405 72436305 - Spns2 protein_coding retained_intron MGP_WSBEiJ_T0029718.1 MGP_WSBEiJ_G0018003.1 mouse_genomes_project 11 72434371 72438114 - Spns2 protein_coding processed_transcript MGP_WSBEiJ_T0029719.1 MGP_WSBEiJ_G0018003.1 mouse_genomes_project 11 72434495 72438385 - MGP_WSBEiJ_P0029719 Spns2 protein_coding protein_coding MGP_WSBEiJ_T0029720.1 MGP_WSBEiJ_G0018003.1 mouse_genomes_project 11 72434604 72435882 - Spns2 protein_coding processed_transcript MGP_WSBEiJ_T0029721.1 MGP_WSBEiJ_G0018003.1 mouse_genomes_project 11 72440792 72456791 - Spns2 protein_coding processed_transcript MGP_WSBEiJ_T0006242.1 MGP_WSBEiJ_G0005205.1 mouse_genomes_project 11 102110553 102112594 + Gm12349 lincRNA lincRNA MGP_WSBEiJ_T0030179.1 MGP_WSBEiJ_G0018124.1 mouse_genomes_project 11 78478967 78486087 - Traf4 protein_coding retained_intron MGP_WSBEiJ_T0030180.1 MGP_WSBEiJ_G0018124.1 mouse_genomes_project 11 78479868 78486087 - MGP_WSBEiJ_P0030180 Traf4 protein_coding protein_coding MGP_WSBEiJ_T0030181.1 MGP_WSBEiJ_G0018124.1 mouse_genomes_project 11 78481263 78486014 - Traf4 protein_coding retained_intron MGP_WSBEiJ_T0012277.1 MGP_WSBEiJ_G0010407.1 mouse_genomes_project 11 25020653 25021374 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096921.1 MGP_WSBEiJ_G0035602.1 mouse_genomes_project 11 110191804 110191916 + Gm27595 rRNA rRNA MGP_WSBEiJ_T0003253.1 MGP_WSBEiJ_G0003009.1 mouse_genomes_project 11 110532836 110545169 + Gm11655 antisense antisense MGP_WSBEiJ_T0006149.1 MGP_WSBEiJ_G0005137.1 mouse_genomes_project 11 52980069 53015274 - 4933405E24Rik lincRNA lincRNA MGP_WSBEiJ_T0009583.1 MGP_WSBEiJ_G0007740.1 mouse_genomes_project 11 93134182 93134251 - Gm22702 miRNA miRNA MGP_WSBEiJ_T0028299.1 MGP_WSBEiJ_G0017663.1 mouse_genomes_project 11 52338802 52353462 - Il4 protein_coding processed_transcript MGP_WSBEiJ_T0028300.1 MGP_WSBEiJ_G0017663.1 mouse_genomes_project 11 52348703 52354895 - MGP_WSBEiJ_P0028300 Il4 protein_coding protein_coding MGP_WSBEiJ_T0028301.1 MGP_WSBEiJ_G0017663.1 mouse_genomes_project 11 52348703 52353576 - MGP_WSBEiJ_P0028301 Il4 protein_coding protein_coding MGP_WSBEiJ_T0028302.1 MGP_WSBEiJ_G0017663.1 mouse_genomes_project 11 52348703 52354578 - MGP_WSBEiJ_P0028302 Il4 protein_coding protein_coding MGP_WSBEiJ_T0009557.1 MGP_WSBEiJ_G0007714.1 mouse_genomes_project 11 70540212 70540282 + Mir6925 miRNA miRNA MGP_WSBEiJ_T0031492.1 MGP_WSBEiJ_G0018479.1 mouse_genomes_project 11 101605182 101606447 - MGP_WSBEiJ_P0031492 2300003K06Rik protein_coding protein_coding MGP_WSBEiJ_T0098964.1 MGP_WSBEiJ_G0037627.1 mouse_genomes_project 11 124236622 124236747 + Gm22152 snoRNA snoRNA MGP_WSBEiJ_T0027162.1 MGP_WSBEiJ_G0017371.1 mouse_genomes_project 11 2466090 2472014 + MGP_WSBEiJ_P0027162 Xbp1 protein_coding protein_coding MGP_WSBEiJ_T0027163.1 MGP_WSBEiJ_G0017371.1 mouse_genomes_project 11 2466436 2470148 + Xbp1 protein_coding retained_intron MGP_WSBEiJ_T0027164.1 MGP_WSBEiJ_G0017371.1 mouse_genomes_project 11 2467094 2471065 + MGP_WSBEiJ_P0027164 Xbp1 protein_coding protein_coding MGP_WSBEiJ_T0027165.1 MGP_WSBEiJ_G0017371.1 mouse_genomes_project 11 2467354 2471227 + MGP_WSBEiJ_P0027165 Xbp1 protein_coding protein_coding MGP_WSBEiJ_T0003297.1 MGP_WSBEiJ_G0003041.1 mouse_genomes_project 11 124023923 124027129 + Gm11773 antisense antisense MGP_WSBEiJ_T0012220.1 MGP_WSBEiJ_G0010350.1 mouse_genomes_project 11 3704693 3705679 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032139.1 MGP_WSBEiJ_G0018629.1 mouse_genomes_project 11 106461251 106576315 - MGP_WSBEiJ_P0032139 Kansl1 protein_coding protein_coding MGP_WSBEiJ_T0032140.1 MGP_WSBEiJ_G0018629.1 mouse_genomes_project 11 106461523 106576315 - MGP_WSBEiJ_P0032140 Kansl1 protein_coding protein_coding MGP_WSBEiJ_T0032141.1 MGP_WSBEiJ_G0018629.1 mouse_genomes_project 11 106461523 106607895 - MGP_WSBEiJ_P0032141 Kansl1 protein_coding protein_coding MGP_WSBEiJ_T0032142.1 MGP_WSBEiJ_G0018629.1 mouse_genomes_project 11 106461567 106575722 - MGP_WSBEiJ_P0032142 Kansl1 protein_coding protein_coding MGP_WSBEiJ_T0032143.1 MGP_WSBEiJ_G0018629.1 mouse_genomes_project 11 106462944 106472252 - Kansl1 protein_coding processed_transcript MGP_WSBEiJ_T0032144.1 MGP_WSBEiJ_G0018629.1 mouse_genomes_project 11 106559150 106607025 - MGP_WSBEiJ_P0032144 Kansl1 protein_coding protein_coding MGP_WSBEiJ_T0030524.1 MGP_WSBEiJ_G0018220.1 mouse_genomes_project 11 84431463 84437163 + MGP_WSBEiJ_P0030524 Wfdc21 protein_coding protein_coding MGP_WSBEiJ_T0028375.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53339594 53515439 + MGP_WSBEiJ_P0028375 Rapgef6 protein_coding protein_coding MGP_WSBEiJ_T0028376.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53339636 53369840 + Rapgef6 protein_coding processed_transcript MGP_WSBEiJ_T0028377.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53339637 53513133 + MGP_WSBEiJ_P0028377 Rapgef6 protein_coding protein_coding MGP_WSBEiJ_T0028378.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53339637 53449378 + MGP_WSBEiJ_P0028378 Rapgef6 protein_coding protein_coding MGP_WSBEiJ_T0028379.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53339658 53378681 + Rapgef6 protein_coding processed_transcript MGP_WSBEiJ_T0028380.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53409854 53453234 + Rapgef6 protein_coding processed_transcript MGP_WSBEiJ_T0028381.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53410758 53512259 + MGP_WSBEiJ_P0028381 Rapgef6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028382.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53436726 53503452 + MGP_WSBEiJ_P0028382 Rapgef6 protein_coding protein_coding MGP_WSBEiJ_T0028383.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53436726 53503531 + MGP_WSBEiJ_P0028383 Rapgef6 protein_coding protein_coding MGP_WSBEiJ_T0028384.1 MGP_WSBEiJ_G0017681.1 mouse_genomes_project 11 53506858 53512640 + MGP_WSBEiJ_P0028384 Rapgef6 protein_coding protein_coding MGP_WSBEiJ_T0006205.1 MGP_WSBEiJ_G0005180.1 mouse_genomes_project 11 85253125 85263194 + Lhx1os lincRNA lincRNA MGP_WSBEiJ_T0006206.1 MGP_WSBEiJ_G0005180.1 mouse_genomes_project 11 85253134 85263194 + Lhx1os lincRNA lincRNA MGP_WSBEiJ_T0006207.1 MGP_WSBEiJ_G0005180.1 mouse_genomes_project 11 85253149 85263193 + Lhx1os lincRNA lincRNA MGP_WSBEiJ_T0012340.1 MGP_WSBEiJ_G0010470.1 mouse_genomes_project 11 52383002 52383635 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011101.1 MGP_WSBEiJ_G0009258.1 mouse_genomes_project 11 18500162 18500431 - Gm22600 misc_RNA misc_RNA MGP_WSBEiJ_T0012262.1 MGP_WSBEiJ_G0010392.1 mouse_genomes_project 11 18799678 18800251 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098946.1 MGP_WSBEiJ_G0037609.1 mouse_genomes_project 11 91849055 91849192 - Gm22762 snoRNA snoRNA MGP_WSBEiJ_T0032077.1 MGP_WSBEiJ_G0018613.1 mouse_genomes_project 11 105263997 105267906 - MGP_WSBEiJ_P0032077 1700023F06Rik protein_coding protein_coding MGP_WSBEiJ_T0032078.1 MGP_WSBEiJ_G0018613.1 mouse_genomes_project 11 105264012 105275209 - MGP_WSBEiJ_P0032078 1700023F06Rik protein_coding protein_coding MGP_WSBEiJ_T0032079.1 MGP_WSBEiJ_G0018613.1 mouse_genomes_project 11 105264484 105275183 - MGP_WSBEiJ_P0032079 1700023F06Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032080.1 MGP_WSBEiJ_G0018613.1 mouse_genomes_project 11 105265393 105275184 - MGP_WSBEiJ_P0032080 1700023F06Rik protein_coding protein_coding MGP_WSBEiJ_T0032081.1 MGP_WSBEiJ_G0018613.1 mouse_genomes_project 11 105265766 105275209 - 1700023F06Rik protein_coding retained_intron MGP_WSBEiJ_T0012332.1 MGP_WSBEiJ_G0010462.1 mouse_genomes_project 11 48206492 48206979 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032595.1 MGP_WSBEiJ_G0018738.1 mouse_genomes_project 11 118163040 118183248 - MGP_WSBEiJ_P0032595 Hid1 protein_coding protein_coding MGP_WSBEiJ_T0032596.1 MGP_WSBEiJ_G0018738.1 mouse_genomes_project 11 118163040 118183285 - MGP_WSBEiJ_P0032596 Hid1 protein_coding protein_coding MGP_WSBEiJ_T0032597.1 MGP_WSBEiJ_G0018738.1 mouse_genomes_project 11 118164350 118166374 - Hid1 protein_coding processed_transcript MGP_WSBEiJ_T0032598.1 MGP_WSBEiJ_G0018738.1 mouse_genomes_project 11 118169710 118170965 - Hid1 protein_coding processed_transcript MGP_WSBEiJ_T0032599.1 MGP_WSBEiJ_G0018738.1 mouse_genomes_project 11 118170950 118183196 - MGP_WSBEiJ_P0032599 Hid1 protein_coding protein_coding MGP_WSBEiJ_T0032600.1 MGP_WSBEiJ_G0018738.1 mouse_genomes_project 11 118172273 118175875 - Hid1 protein_coding processed_transcript MGP_WSBEiJ_T0032601.1 MGP_WSBEiJ_G0018738.1 mouse_genomes_project 11 118172368 118183138 - Hid1 protein_coding processed_transcript MGP_WSBEiJ_T0032602.1 MGP_WSBEiJ_G0018738.1 mouse_genomes_project 11 118174230 118174871 - Hid1 protein_coding processed_transcript MGP_WSBEiJ_T0009608.1 MGP_WSBEiJ_G0007765.1 mouse_genomes_project 11 107784626 107784745 + Gm23990 miRNA miRNA MGP_WSBEiJ_T0009550.1 MGP_WSBEiJ_G0007707.1 mouse_genomes_project 11 69659208 69659271 - Mir6924 miRNA miRNA MGP_WSBEiJ_T0012450.1 MGP_WSBEiJ_G0010580.1 mouse_genomes_project 11 96809960 96810136 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027447.1 MGP_WSBEiJ_G0017441.1 mouse_genomes_project 11 18541057 18628770 + MGP_WSBEiJ_P0027447 Vps54 protein_coding protein_coding MGP_WSBEiJ_T0027448.1 MGP_WSBEiJ_G0017441.1 mouse_genomes_project 11 18541057 18628784 + MGP_WSBEiJ_P0027448 Vps54 protein_coding protein_coding MGP_WSBEiJ_T0027449.1 MGP_WSBEiJ_G0017441.1 mouse_genomes_project 11 18570615 18627976 + MGP_WSBEiJ_P0027449 Vps54 protein_coding protein_coding MGP_WSBEiJ_T0027450.1 MGP_WSBEiJ_G0017441.1 mouse_genomes_project 11 18581084 18595762 + Vps54 protein_coding processed_transcript MGP_WSBEiJ_T0027451.1 MGP_WSBEiJ_G0017441.1 mouse_genomes_project 11 18604086 18611997 + Vps54 protein_coding processed_transcript MGP_WSBEiJ_T0027452.1 MGP_WSBEiJ_G0017441.1 mouse_genomes_project 11 18617276 18619765 + Vps54 protein_coding processed_transcript MGP_WSBEiJ_T0027453.1 MGP_WSBEiJ_G0017441.1 mouse_genomes_project 11 18618852 18628188 + Vps54 protein_coding processed_transcript MGP_WSBEiJ_T0031476.1 MGP_WSBEiJ_G0018463.1 mouse_genomes_project 11 101344345 101345008 - MGP_WSBEiJ_P0031476 Gm11938 protein_coding protein_coding MGP_WSBEiJ_T0032070.1 MGP_WSBEiJ_G0018612.1 mouse_genomes_project 11 105234923 105263970 + MGP_WSBEiJ_P0032070 Fmnl1 protein_coding protein_coding MGP_WSBEiJ_T0032071.1 MGP_WSBEiJ_G0018612.1 mouse_genomes_project 11 105235129 105263964 + MGP_WSBEiJ_P0032071 Fmnl1 protein_coding protein_coding MGP_WSBEiJ_T0032072.1 MGP_WSBEiJ_G0018612.1 mouse_genomes_project 11 105235129 105263977 + MGP_WSBEiJ_P0032072 Fmnl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0032073.1 MGP_WSBEiJ_G0018612.1 mouse_genomes_project 11 105244860 105254469 + Fmnl1 protein_coding processed_transcript MGP_WSBEiJ_T0032074.1 MGP_WSBEiJ_G0018612.1 mouse_genomes_project 11 105249316 105254759 + Fmnl1 protein_coding processed_transcript MGP_WSBEiJ_T0032075.1 MGP_WSBEiJ_G0018612.1 mouse_genomes_project 11 105256418 105263964 + Fmnl1 protein_coding retained_intron MGP_WSBEiJ_T0032076.1 MGP_WSBEiJ_G0018612.1 mouse_genomes_project 11 105260907 105261983 + MGP_WSBEiJ_P0032076 Fmnl1 protein_coding protein_coding MGP_WSBEiJ_T0003146.1 MGP_WSBEiJ_G0002923.1 mouse_genomes_project 11 69143662 69144850 + Kdm6bos antisense antisense MGP_WSBEiJ_T0032905.1 MGP_WSBEiJ_G0018790.1 mouse_genomes_project 11 119568988 119577668 - MGP_WSBEiJ_P0032905 Cygb protein_coding protein_coding MGP_WSBEiJ_T0012452.1 MGP_WSBEiJ_G0010582.1 mouse_genomes_project 11 97131531 97131706 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098960.1 MGP_WSBEiJ_G0037623.1 mouse_genomes_project 11 119596435 119596511 + Snord1c snoRNA snoRNA MGP_WSBEiJ_T0032773.1 MGP_WSBEiJ_G0018767.1 mouse_genomes_project 11 118906454 118937598 + MGP_WSBEiJ_P0032773 Unk protein_coding protein_coding MGP_WSBEiJ_T0032774.1 MGP_WSBEiJ_G0018767.1 mouse_genomes_project 11 118906454 118937598 + MGP_WSBEiJ_P0032774 Unk protein_coding protein_coding MGP_WSBEiJ_T0032775.1 MGP_WSBEiJ_G0018767.1 mouse_genomes_project 11 118906455 118917507 + Unk protein_coding processed_transcript MGP_WSBEiJ_T0032776.1 MGP_WSBEiJ_G0018767.1 mouse_genomes_project 11 118906468 118937608 + MGP_WSBEiJ_P0032776 Unk protein_coding unknown_likely_coding MGP_WSBEiJ_T0032777.1 MGP_WSBEiJ_G0018767.1 mouse_genomes_project 11 118914795 118937598 + Unk protein_coding processed_transcript MGP_WSBEiJ_T0032778.1 MGP_WSBEiJ_G0018767.1 mouse_genomes_project 11 118925645 118930044 + Unk protein_coding retained_intron MGP_WSBEiJ_T0032779.1 MGP_WSBEiJ_G0018767.1 mouse_genomes_project 11 118929661 118932425 + Unk protein_coding retained_intron MGP_WSBEiJ_T0032780.1 MGP_WSBEiJ_G0018767.1 mouse_genomes_project 11 118932255 118935441 + Unk protein_coding retained_intron MGP_WSBEiJ_T0012401.1 MGP_WSBEiJ_G0010531.1 mouse_genomes_project 11 73914672 73916498 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029678.1 MGP_WSBEiJ_G0017992.1 mouse_genomes_project 11 72122622 72123997 - 4933427D14Rik protein_coding processed_transcript MGP_WSBEiJ_T0029679.1 MGP_WSBEiJ_G0017992.1 mouse_genomes_project 11 72122622 72176078 - MGP_WSBEiJ_P0029679 4933427D14Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029680.1 MGP_WSBEiJ_G0017992.1 mouse_genomes_project 11 72122623 72175886 - MGP_WSBEiJ_P0029680 4933427D14Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029681.1 MGP_WSBEiJ_G0017992.1 mouse_genomes_project 11 72122790 72172389 - MGP_WSBEiJ_P0029681 4933427D14Rik protein_coding protein_coding MGP_WSBEiJ_T0029682.1 MGP_WSBEiJ_G0017992.1 mouse_genomes_project 11 72124086 72143788 - 4933427D14Rik protein_coding processed_transcript MGP_WSBEiJ_T0029683.1 MGP_WSBEiJ_G0017992.1 mouse_genomes_project 11 72164063 72176050 - MGP_WSBEiJ_P0029683 4933427D14Rik protein_coding protein_coding MGP_WSBEiJ_T0029684.1 MGP_WSBEiJ_G0017992.1 mouse_genomes_project 11 72167062 72175839 - 4933427D14Rik protein_coding processed_transcript MGP_WSBEiJ_T0029685.1 MGP_WSBEiJ_G0017992.1 mouse_genomes_project 11 72167309 72171227 - 4933427D14Rik protein_coding processed_transcript MGP_WSBEiJ_T0003044.1 MGP_WSBEiJ_G0002837.1 mouse_genomes_project 11 2884708 2886152 + Gm11967 antisense antisense MGP_WSBEiJ_T0100482.1 MGP_WSBEiJ_G0038941.1 mouse_genomes_project 11 74306135 74307071 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0031477.1 MGP_WSBEiJ_G0018464.1 mouse_genomes_project 11 101352277 101352978 - MGP_WSBEiJ_P0031477 protein_coding protein_coding MGP_WSBEiJ_T0028480.1 MGP_WSBEiJ_G0017712.1 mouse_genomes_project 11 57307284 57314869 + MGP_WSBEiJ_P0028480 Zfp692 protein_coding protein_coding MGP_WSBEiJ_T0028481.1 MGP_WSBEiJ_G0017712.1 mouse_genomes_project 11 57307387 57314883 + MGP_WSBEiJ_P0028481 Zfp692 protein_coding protein_coding MGP_WSBEiJ_T0012438.1 MGP_WSBEiJ_G0010568.1 mouse_genomes_project 11 89284660 89284985 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006123.1 MGP_WSBEiJ_G0005113.1 mouse_genomes_project 11 30871766 30875189 + lincRNA lincRNA MGP_WSBEiJ_T0029533.1 MGP_WSBEiJ_G0017966.1 mouse_genomes_project 11 70441547 70445859 - MGP_WSBEiJ_P0029533 Chrne protein_coding protein_coding MGP_WSBEiJ_T0029534.1 MGP_WSBEiJ_G0017966.1 mouse_genomes_project 11 70441547 70445881 - MGP_WSBEiJ_P0029534 Chrne protein_coding protein_coding MGP_WSBEiJ_T0029535.1 MGP_WSBEiJ_G0017966.1 mouse_genomes_project 11 70441549 70442338 - Chrne protein_coding retained_intron MGP_WSBEiJ_T0029536.1 MGP_WSBEiJ_G0017966.1 mouse_genomes_project 11 70441557 70442362 - Chrne protein_coding retained_intron MGP_WSBEiJ_T0097710.1 MGP_WSBEiJ_G0036373.1 mouse_genomes_project 11 75054954 75055045 - Gm22733 snRNA snRNA MGP_WSBEiJ_T0031695.1 MGP_WSBEiJ_G0018542.1 mouse_genomes_project 11 103133168 103135391 + MGP_WSBEiJ_P0031695 Ramp2 protein_coding protein_coding MGP_WSBEiJ_T0031696.1 MGP_WSBEiJ_G0018542.1 mouse_genomes_project 11 103133452 103134825 + Ramp2 protein_coding retained_intron MGP_WSBEiJ_T0031697.1 MGP_WSBEiJ_G0018542.1 mouse_genomes_project 11 103133531 103146380 + MGP_WSBEiJ_P0031697 Ramp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031698.1 MGP_WSBEiJ_G0018542.1 mouse_genomes_project 11 103133569 103135391 + MGP_WSBEiJ_P0031698 Ramp2 protein_coding protein_coding MGP_WSBEiJ_T0031699.1 MGP_WSBEiJ_G0018542.1 mouse_genomes_project 11 103133572 103135391 + MGP_WSBEiJ_P0031699 Ramp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031700.1 MGP_WSBEiJ_G0018542.1 mouse_genomes_project 11 103133707 103134777 + MGP_WSBEiJ_P0031700 Ramp2 protein_coding protein_coding MGP_WSBEiJ_T0031701.1 MGP_WSBEiJ_G0018542.1 mouse_genomes_project 11 103134073 103135391 + Ramp2 protein_coding retained_intron MGP_WSBEiJ_T0031702.1 MGP_WSBEiJ_G0018542.1 mouse_genomes_project 11 103134233 103135205 + MGP_WSBEiJ_P0031702 Ramp2 protein_coding protein_coding MGP_WSBEiJ_T0032213.1 MGP_WSBEiJ_G0018645.1 mouse_genomes_project 11 108210249 108230916 + MGP_WSBEiJ_P0032213 Kcnh6 protein_coding protein_coding MGP_WSBEiJ_T0032214.1 MGP_WSBEiJ_G0018645.1 mouse_genomes_project 11 108210298 108231358 + MGP_WSBEiJ_P0032214 Kcnh6 protein_coding protein_coding MGP_WSBEiJ_T0032215.1 MGP_WSBEiJ_G0018645.1 mouse_genomes_project 11 108210328 108230873 + MGP_WSBEiJ_P0032215 Kcnh6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032216.1 MGP_WSBEiJ_G0018645.1 mouse_genomes_project 11 108215897 108219597 + Kcnh6 protein_coding processed_transcript MGP_WSBEiJ_T0032168.1 MGP_WSBEiJ_G0018636.1 mouse_genomes_project 11 107293086 107308196 + MGP_WSBEiJ_P0032168 Mettl2 protein_coding protein_coding MGP_WSBEiJ_T0032169.1 MGP_WSBEiJ_G0018636.1 mouse_genomes_project 11 107293140 107308196 + Mettl2 protein_coding processed_transcript MGP_WSBEiJ_T0032170.1 MGP_WSBEiJ_G0018636.1 mouse_genomes_project 11 107299102 107306775 + Mettl2 protein_coding processed_transcript MGP_WSBEiJ_T0032171.1 MGP_WSBEiJ_G0018636.1 mouse_genomes_project 11 107299113 107302310 + Mettl2 protein_coding processed_transcript MGP_WSBEiJ_T0032172.1 MGP_WSBEiJ_G0018636.1 mouse_genomes_project 11 107304216 107308196 + Mettl2 protein_coding processed_transcript MGP_WSBEiJ_T0006272.1 MGP_WSBEiJ_G0005228.1 mouse_genomes_project 11 118862434 118867868 - B230344G16Rik lincRNA lincRNA MGP_WSBEiJ_T0012411.1 MGP_WSBEiJ_G0010541.1 mouse_genomes_project 11 78469813 78470056 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029820.1 MGP_WSBEiJ_G0018043.1 mouse_genomes_project 11 74109303 74122654 - MGP_WSBEiJ_P0029820 Olfr139 protein_coding protein_coding MGP_WSBEiJ_T0029821.1 MGP_WSBEiJ_G0018043.1 mouse_genomes_project 11 74109303 74110251 - MGP_WSBEiJ_P0029821 Olfr139 protein_coding protein_coding MGP_WSBEiJ_T0029822.1 MGP_WSBEiJ_G0018043.1 mouse_genomes_project 11 74116520 74120109 - Olfr139 protein_coding processed_transcript MGP_WSBEiJ_T0012382.1 MGP_WSBEiJ_G0010512.1 mouse_genomes_project 11 67628184 67628841 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030928.1 MGP_WSBEiJ_G0018314.1 mouse_genomes_project 11 95551799 95610292 - MGP_WSBEiJ_P0030928 Abcc3 protein_coding protein_coding MGP_WSBEiJ_T0030929.1 MGP_WSBEiJ_G0018314.1 mouse_genomes_project 11 95551802 95610292 - MGP_WSBEiJ_P0030929 Abcc3 protein_coding protein_coding MGP_WSBEiJ_T0030930.1 MGP_WSBEiJ_G0018314.1 mouse_genomes_project 11 95552157 95560202 - Abcc3 protein_coding processed_transcript MGP_WSBEiJ_T0030931.1 MGP_WSBEiJ_G0018314.1 mouse_genomes_project 11 95578078 95581801 - Abcc3 protein_coding processed_transcript MGP_WSBEiJ_T0030932.1 MGP_WSBEiJ_G0018314.1 mouse_genomes_project 11 95578723 95610236 - Abcc3 protein_coding processed_transcript MGP_WSBEiJ_T0030933.1 MGP_WSBEiJ_G0018314.1 mouse_genomes_project 11 95588906 95610313 - Abcc3 protein_coding processed_transcript MGP_WSBEiJ_T0032748.1 MGP_WSBEiJ_G0018761.1 mouse_genomes_project 11 118772987 118779315 + MGP_WSBEiJ_P0032748 Smim5 protein_coding protein_coding MGP_WSBEiJ_T0032749.1 MGP_WSBEiJ_G0018761.1 mouse_genomes_project 11 118773199 118778942 + MGP_WSBEiJ_P0032749 Smim5 protein_coding protein_coding MGP_WSBEiJ_T0032750.1 MGP_WSBEiJ_G0018761.1 mouse_genomes_project 11 118773223 118778759 + MGP_WSBEiJ_P0032750 Smim5 protein_coding protein_coding MGP_WSBEiJ_T0029807.1 MGP_WSBEiJ_G0018034.1 mouse_genomes_project 11 73869036 73993261 + MGP_WSBEiJ_P0029807 Olfr390 protein_coding protein_coding MGP_WSBEiJ_T0029808.1 MGP_WSBEiJ_G0018034.1 mouse_genomes_project 11 73869054 73992792 + MGP_WSBEiJ_P0029808 Olfr390 protein_coding protein_coding MGP_WSBEiJ_T0029815.1 MGP_WSBEiJ_G0018034.1 mouse_genomes_project 11 73992322 73993261 + MGP_WSBEiJ_P0029815 Olfr390 protein_coding protein_coding MGP_WSBEiJ_T0003230.1 MGP_WSBEiJ_G0002988.1 mouse_genomes_project 11 104000324 104005146 - E130111B04Rik antisense antisense MGP_WSBEiJ_T0003078.1 MGP_WSBEiJ_G0002865.1 mouse_genomes_project 11 44426621 44427734 - Gm16034 antisense antisense MGP_WSBEiJ_T0027059.1 MGP_WSBEiJ_G0017351.1 mouse_genomes_project 11 1130824 1146101 + MGP_WSBEiJ_P0027059 Lif protein_coding protein_coding MGP_WSBEiJ_T0027060.1 MGP_WSBEiJ_G0017351.1 mouse_genomes_project 11 1140378 1141840 + Lif protein_coding processed_transcript MGP_WSBEiJ_T0027061.1 MGP_WSBEiJ_G0017351.1 mouse_genomes_project 11 1140677 1146101 + MGP_WSBEiJ_P0027061 Lif protein_coding protein_coding MGP_WSBEiJ_T0003137.1 MGP_WSBEiJ_G0002916.1 mouse_genomes_project 11 66764384 66793591 - Gm12300 antisense antisense MGP_WSBEiJ_T0003138.1 MGP_WSBEiJ_G0002916.1 mouse_genomes_project 11 66778442 66784469 - Gm12300 antisense antisense MGP_WSBEiJ_T0003139.1 MGP_WSBEiJ_G0002916.1 mouse_genomes_project 11 66778759 66793299 - Gm12300 antisense antisense MGP_WSBEiJ_T0031019.1 MGP_WSBEiJ_G0018336.1 mouse_genomes_project 11 96472606 96478421 - MGP_WSBEiJ_P0031019 Dlx4 protein_coding protein_coding MGP_WSBEiJ_T0031020.1 MGP_WSBEiJ_G0018336.1 mouse_genomes_project 11 96475784 96477959 - Dlx4 protein_coding processed_transcript MGP_WSBEiJ_T0011109.1 MGP_WSBEiJ_G0009266.1 mouse_genomes_project 11 72306924 72307195 + Gm23224 misc_RNA misc_RNA MGP_WSBEiJ_T0027953.1 MGP_WSBEiJ_G0017569.1 mouse_genomes_project 11 45108815 45141997 + MGP_WSBEiJ_P0027953 Timd4 protein_coding protein_coding MGP_WSBEiJ_T0030246.1 MGP_WSBEiJ_G0018137.1 mouse_genomes_project 11 78684544 78690228 + MGP_WSBEiJ_P0030246 Unc119 protein_coding protein_coding MGP_WSBEiJ_T0030247.1 MGP_WSBEiJ_G0018137.1 mouse_genomes_project 11 78684560 78688909 + Unc119 protein_coding retained_intron MGP_WSBEiJ_T0030248.1 MGP_WSBEiJ_G0018137.1 mouse_genomes_project 11 78684568 78690228 + MGP_WSBEiJ_P0030248 Unc119 protein_coding protein_coding MGP_WSBEiJ_T0030249.1 MGP_WSBEiJ_G0018137.1 mouse_genomes_project 11 78684607 78689960 + Unc119 protein_coding retained_intron MGP_WSBEiJ_T0030250.1 MGP_WSBEiJ_G0018137.1 mouse_genomes_project 11 78687724 78690043 + MGP_WSBEiJ_P0030250 Unc119 protein_coding protein_coding MGP_WSBEiJ_T0030251.1 MGP_WSBEiJ_G0018137.1 mouse_genomes_project 11 78687969 78689185 + Unc119 protein_coding retained_intron MGP_WSBEiJ_T0030252.1 MGP_WSBEiJ_G0018137.1 mouse_genomes_project 11 78689000 78690062 + Unc119 protein_coding retained_intron MGP_WSBEiJ_T0003069.1 MGP_WSBEiJ_G0002856.1 mouse_genomes_project 11 32169899 32178308 + 4930403D09Rik antisense antisense MGP_WSBEiJ_T0029375.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69750588 69763814 - MGP_WSBEiJ_P0029375 Elp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029376.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69750590 69764794 - MGP_WSBEiJ_P0029376 Elp5 protein_coding protein_coding MGP_WSBEiJ_T0029377.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69750594 69763805 - Elp5 protein_coding retained_intron MGP_WSBEiJ_T0029378.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69750598 69751769 - Elp5 protein_coding retained_intron MGP_WSBEiJ_T0029379.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69751607 69763603 - MGP_WSBEiJ_P0029379 Elp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029380.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69751880 69763803 - Elp5 protein_coding retained_intron MGP_WSBEiJ_T0029381.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69753076 69763753 - Elp5 protein_coding retained_intron MGP_WSBEiJ_T0029382.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69753094 69765181 - MGP_WSBEiJ_P0029382 Elp5 protein_coding protein_coding MGP_WSBEiJ_T0029383.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69758656 69766059 - MGP_WSBEiJ_P0029383 Elp5 protein_coding protein_coding MGP_WSBEiJ_T0029384.1 MGP_WSBEiJ_G0017935.1 mouse_genomes_project 11 69763576 69764238 - MGP_WSBEiJ_P0029384 Elp5 protein_coding protein_coding MGP_WSBEiJ_T0031856.1 MGP_WSBEiJ_G0018575.1 mouse_genomes_project 11 104087876 104089023 - MGP_WSBEiJ_P0031856 Pyy protein_coding protein_coding MGP_WSBEiJ_T0031857.1 MGP_WSBEiJ_G0018575.1 mouse_genomes_project 11 104087876 104089033 - MGP_WSBEiJ_P0031857 Pyy protein_coding protein_coding MGP_WSBEiJ_T0031858.1 MGP_WSBEiJ_G0018575.1 mouse_genomes_project 11 104087880 104088617 - MGP_WSBEiJ_P0031858 Pyy protein_coding protein_coding MGP_WSBEiJ_T0031859.1 MGP_WSBEiJ_G0018575.1 mouse_genomes_project 11 104088161 104089033 - Pyy protein_coding retained_intron MGP_WSBEiJ_T0012500.1 MGP_WSBEiJ_G0010630.1 mouse_genomes_project 11 118318729 118318888 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012210.1 MGP_WSBEiJ_G0010340.1 mouse_genomes_project 11 1101451 1101960 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003228.1 MGP_WSBEiJ_G0002986.1 mouse_genomes_project 11 103919971 103930103 + 4930417O22Rik antisense antisense MGP_WSBEiJ_T0027747.1 MGP_WSBEiJ_G0017508.1 mouse_genomes_project 11 30913419 30942931 - MGP_WSBEiJ_P0027747 Fgf18 protein_coding protein_coding MGP_WSBEiJ_T0006238.1 MGP_WSBEiJ_G0005202.1 mouse_genomes_project 11 98149107 98188037 - 2010300F17Rik lincRNA lincRNA MGP_WSBEiJ_T0006239.1 MGP_WSBEiJ_G0005202.1 mouse_genomes_project 11 98186628 98188011 - 2010300F17Rik lincRNA lincRNA MGP_WSBEiJ_T0031181.1 MGP_WSBEiJ_G0018380.1 mouse_genomes_project 11 98506815 98514469 + MGP_WSBEiJ_P0031181 Mrpl10 protein_coding protein_coding MGP_WSBEiJ_T0031182.1 MGP_WSBEiJ_G0018380.1 mouse_genomes_project 11 98506850 98513774 + MGP_WSBEiJ_P0031182 Mrpl10 protein_coding protein_coding MGP_WSBEiJ_T0033437.1 MGP_WSBEiJ_G0018893.1 mouse_genomes_project 11 124325691 124328154 - MGP_WSBEiJ_P0033437 Tex19.2 protein_coding protein_coding MGP_WSBEiJ_T0009574.1 MGP_WSBEiJ_G0007731.1 mouse_genomes_project 11 80142319 80142385 + Mir193a miRNA miRNA MGP_WSBEiJ_T0097711.1 MGP_WSBEiJ_G0036374.1 mouse_genomes_project 11 77211278 77211428 + Gm22611 snRNA snRNA MGP_WSBEiJ_T0100504.1 MGP_WSBEiJ_G0038963.1 mouse_genomes_project 11 123957114 123959281 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012499.1 MGP_WSBEiJ_G0010629.1 mouse_genomes_project 11 117720282 117720689 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012495.1 MGP_WSBEiJ_G0010625.1 mouse_genomes_project 11 116458479 116458984 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003286.1 MGP_WSBEiJ_G0003034.1 mouse_genomes_project 11 123384605 123386517 - Gm11770 antisense antisense MGP_WSBEiJ_T0012430.1 MGP_WSBEiJ_G0010560.1 mouse_genomes_project 11 85861749 85862417 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029412.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69802289 69833505 + MGP_WSBEiJ_P0029412 Dlg4 protein_coding protein_coding MGP_WSBEiJ_T0029413.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69802445 69818557 + MGP_WSBEiJ_P0029413 Dlg4 protein_coding protein_coding MGP_WSBEiJ_T0029414.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69802479 69814378 + Dlg4 protein_coding processed_transcript MGP_WSBEiJ_T0029415.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69803670 69833505 + MGP_WSBEiJ_P0029415 Dlg4 protein_coding protein_coding MGP_WSBEiJ_T0029416.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69804972 69833505 + MGP_WSBEiJ_P0029416 Dlg4 protein_coding protein_coding MGP_WSBEiJ_T0029417.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69805108 69818453 + MGP_WSBEiJ_P0029417 Dlg4 protein_coding protein_coding MGP_WSBEiJ_T0029418.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69814133 69818295 + MGP_WSBEiJ_P0029418 Dlg4 protein_coding protein_coding MGP_WSBEiJ_T0029419.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69817058 69827154 + MGP_WSBEiJ_P0029419 Dlg4 protein_coding protein_coding MGP_WSBEiJ_T0029420.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69817339 69818214 + MGP_WSBEiJ_P0029420 Dlg4 protein_coding protein_coding MGP_WSBEiJ_T0029421.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69817940 69819038 + Dlg4 protein_coding retained_intron MGP_WSBEiJ_T0029422.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69827932 69832592 + MGP_WSBEiJ_P0029422 Dlg4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029423.1 MGP_WSBEiJ_G0017941.1 mouse_genomes_project 11 69832169 69832691 + Dlg4 protein_coding retained_intron MGP_WSBEiJ_T0009535.1 MGP_WSBEiJ_G0007692.1 mouse_genomes_project 11 58087005 58087143 - Gm44313 miRNA miRNA MGP_WSBEiJ_T0003162.1 MGP_WSBEiJ_G0002937.1 mouse_genomes_project 11 80096183 80101030 - Rab11fip4os2 antisense antisense MGP_WSBEiJ_T0003163.1 MGP_WSBEiJ_G0002937.1 mouse_genomes_project 11 80099812 80101076 - Rab11fip4os2 antisense antisense MGP_WSBEiJ_T0097691.1 MGP_WSBEiJ_G0036354.1 mouse_genomes_project 11 46225581 46225742 - Gm23039 snRNA snRNA MGP_WSBEiJ_T0016656.1 MGP_WSBEiJ_G0014622.1 mouse_genomes_project 11 99927856 99938474 - 1700003D09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0027790.1 MGP_WSBEiJ_G0017522.1 mouse_genomes_project 11 33006174 33620684 + MGP_WSBEiJ_P0027790 Slit3 protein_coding protein_coding MGP_WSBEiJ_T0027791.1 MGP_WSBEiJ_G0017522.1 mouse_genomes_project 11 33058964 33126486 + Slit3 protein_coding processed_transcript MGP_WSBEiJ_T0027792.1 MGP_WSBEiJ_G0017522.1 mouse_genomes_project 11 33065118 33413354 + Slit3 protein_coding processed_transcript MGP_WSBEiJ_T0027793.1 MGP_WSBEiJ_G0017522.1 mouse_genomes_project 11 33448083 33518449 + Slit3 protein_coding processed_transcript MGP_WSBEiJ_T0098924.1 MGP_WSBEiJ_G0037587.1 mouse_genomes_project 11 61966930 61967002 + Snord49b snoRNA snoRNA MGP_WSBEiJ_T0027288.1 MGP_WSBEiJ_G0017401.1 mouse_genomes_project 11 3845293 3847322 - Gm11983 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0027289.1 MGP_WSBEiJ_G0017401.1 mouse_genomes_project 11 3846475 3846793 - MGP_WSBEiJ_P0027289 Gm11983 protein_coding protein_coding MGP_WSBEiJ_T0032877.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119445588 119453608 + MGP_WSBEiJ_P0032877 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032878.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119445784 119452651 + MGP_WSBEiJ_P0032878 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032879.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119445825 119452235 + Sphk1 protein_coding retained_intron MGP_WSBEiJ_T0032880.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119446405 119453608 + MGP_WSBEiJ_P0032880 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032881.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119446572 119453621 + MGP_WSBEiJ_P0032881 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032882.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119447105 119453625 + MGP_WSBEiJ_P0032882 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032883.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119447112 119453619 + Sphk1 protein_coding retained_intron MGP_WSBEiJ_T0032884.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119447115 119452663 + MGP_WSBEiJ_P0032884 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032885.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119447118 119452292 + MGP_WSBEiJ_P0032885 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032886.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119447134 119453625 + MGP_WSBEiJ_P0032886 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032887.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119447586 119453608 + MGP_WSBEiJ_P0032887 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032888.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119447912 119452587 + Sphk1 protein_coding processed_transcript MGP_WSBEiJ_T0032889.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119447929 119452946 + MGP_WSBEiJ_P0032889 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032890.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119448236 119452649 + MGP_WSBEiJ_P0032890 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0032891.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119448821 119452239 + Sphk1 protein_coding retained_intron MGP_WSBEiJ_T0032892.1 MGP_WSBEiJ_G0018786.1 mouse_genomes_project 11 119451690 119453621 + MGP_WSBEiJ_P0032892 Sphk1 protein_coding protein_coding MGP_WSBEiJ_T0027204.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2939684 3035316 - MGP_WSBEiJ_P0027204 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027205.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2939710 2954167 - Camk2b protein_coding processed_transcript MGP_WSBEiJ_T0027206.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2939714 3035316 - MGP_WSBEiJ_P0027206 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027207.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2939714 3035131 - MGP_WSBEiJ_P0027207 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027208.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2941596 3035131 - MGP_WSBEiJ_P0027208 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027209.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2941697 3035150 - MGP_WSBEiJ_P0027209 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027210.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2941700 3035113 - MGP_WSBEiJ_P0027210 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027211.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2941700 3035310 - MGP_WSBEiJ_P0027211 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027212.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2941708 3035180 - MGP_WSBEiJ_P0027212 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027213.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2941763 3035106 - MGP_WSBEiJ_P0027213 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027214.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2942245 3035138 - MGP_WSBEiJ_P0027214 Camk2b protein_coding protein_coding MGP_WSBEiJ_T0027215.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2958130 3035106 - Camk2b protein_coding processed_transcript MGP_WSBEiJ_T0027216.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2960424 2970488 - Camk2b protein_coding processed_transcript MGP_WSBEiJ_T0027217.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2962849 3035930 - Camk2b protein_coding processed_transcript MGP_WSBEiJ_T0027218.1 MGP_WSBEiJ_G0017384.1 mouse_genomes_project 11 2975898 3035226 - Camk2b protein_coding processed_transcript MGP_WSBEiJ_T0096911.1 MGP_WSBEiJ_G0035592.1 mouse_genomes_project 11 56720416 56720535 + n-R5s69 rRNA rRNA MGP_WSBEiJ_T0027299.1 MGP_WSBEiJ_G0017406.1 mouse_genomes_project 11 5896831 6035001 - MGP_WSBEiJ_P0027299 Pkd1l1 protein_coding protein_coding MGP_WSBEiJ_T0027300.1 MGP_WSBEiJ_G0017406.1 mouse_genomes_project 11 5896898 6011488 - MGP_WSBEiJ_P0027300 Pkd1l1 protein_coding protein_coding MGP_WSBEiJ_T0027301.1 MGP_WSBEiJ_G0017406.1 mouse_genomes_project 11 5914903 5929816 - Pkd1l1 protein_coding processed_transcript MGP_WSBEiJ_T0003101.1 MGP_WSBEiJ_G0002886.1 mouse_genomes_project 11 56568944 56593170 - 4933424L21Rik antisense antisense MGP_WSBEiJ_T0097696.1 MGP_WSBEiJ_G0036359.1 mouse_genomes_project 11 56697542 56697645 + Gm24582 snRNA snRNA MGP_WSBEiJ_T0032896.1 MGP_WSBEiJ_G0018788.1 mouse_genomes_project 11 119502014 119516157 + Aanat protein_coding processed_transcript MGP_WSBEiJ_T0032897.1 MGP_WSBEiJ_G0018788.1 mouse_genomes_project 11 119510747 119516504 + MGP_WSBEiJ_P0032897 Aanat protein_coding protein_coding MGP_WSBEiJ_T0032898.1 MGP_WSBEiJ_G0018788.1 mouse_genomes_project 11 119510747 119516369 + MGP_WSBEiJ_P0032898 Aanat protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032899.1 MGP_WSBEiJ_G0018788.1 mouse_genomes_project 11 119512633 119516369 + MGP_WSBEiJ_P0032899 Aanat protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032900.1 MGP_WSBEiJ_G0018788.1 mouse_genomes_project 11 119512828 119515088 + Aanat protein_coding processed_transcript MGP_WSBEiJ_T0016617.1 MGP_WSBEiJ_G0014601.1 mouse_genomes_project 11 75613226 75618337 + Mir22hg processed_transcript processed_transcript MGP_WSBEiJ_T0016618.1 MGP_WSBEiJ_G0014601.1 mouse_genomes_project 11 75613331 75615717 + Mir22hg processed_transcript processed_transcript MGP_WSBEiJ_T0030300.1 MGP_WSBEiJ_G0018154.1 mouse_genomes_project 11 79396318 79537058 - MGP_WSBEiJ_P0030300 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030301.1 MGP_WSBEiJ_G0018154.1 mouse_genomes_project 11 79396327 79537216 - MGP_WSBEiJ_P0030301 protein_coding protein_coding MGP_WSBEiJ_T0030302.1 MGP_WSBEiJ_G0018154.1 mouse_genomes_project 11 79409596 79537216 - MGP_WSBEiJ_P0030302 protein_coding protein_coding MGP_WSBEiJ_T0030303.1 MGP_WSBEiJ_G0018154.1 mouse_genomes_project 11 79428736 79444620 - MGP_WSBEiJ_P0030303 protein_coding protein_coding MGP_WSBEiJ_T0030304.1 MGP_WSBEiJ_G0018154.1 mouse_genomes_project 11 79428999 79442372 - MGP_WSBEiJ_P0030304 protein_coding protein_coding MGP_WSBEiJ_T0006212.1 MGP_WSBEiJ_G0005185.1 mouse_genomes_project 11 88970233 88980466 - 2010015M23Rik lincRNA lincRNA MGP_WSBEiJ_T0003207.1 MGP_WSBEiJ_G0002970.1 mouse_genomes_project 11 98760569 98763288 + Gm11592 antisense antisense MGP_WSBEiJ_T0033320.1 MGP_WSBEiJ_G0018872.1 mouse_genomes_project 11 123808385 123816823 - MGP_WSBEiJ_P0033320 Mafg protein_coding protein_coding MGP_WSBEiJ_T0033321.1 MGP_WSBEiJ_G0018872.1 mouse_genomes_project 11 123812273 123814064 - MGP_WSBEiJ_P0033321 Mafg protein_coding protein_coding MGP_WSBEiJ_T0033322.1 MGP_WSBEiJ_G0018872.1 mouse_genomes_project 11 123812407 123813903 - MGP_WSBEiJ_P0033322 Mafg protein_coding protein_coding MGP_WSBEiJ_T0033323.1 MGP_WSBEiJ_G0018872.1 mouse_genomes_project 11 123812498 123813415 - MGP_WSBEiJ_P0033323 Mafg protein_coding protein_coding MGP_WSBEiJ_T0033324.1 MGP_WSBEiJ_G0018872.1 mouse_genomes_project 11 123814490 123816779 - Mafg protein_coding processed_transcript MGP_WSBEiJ_T0027240.1 MGP_WSBEiJ_G0017391.1 mouse_genomes_project 11 3363258 3380981 + MGP_WSBEiJ_P0027240 Zmiz2 protein_coding protein_coding MGP_WSBEiJ_T0027241.1 MGP_WSBEiJ_G0017391.1 mouse_genomes_project 11 3363548 3380981 + MGP_WSBEiJ_P0027241 Zmiz2 protein_coding protein_coding MGP_WSBEiJ_T0027242.1 MGP_WSBEiJ_G0017391.1 mouse_genomes_project 11 3363655 3380981 + MGP_WSBEiJ_P0027242 Zmiz2 protein_coding protein_coding MGP_WSBEiJ_T0027243.1 MGP_WSBEiJ_G0017391.1 mouse_genomes_project 11 3370002 3380897 + MGP_WSBEiJ_P0027243 Zmiz2 protein_coding protein_coding MGP_WSBEiJ_T0027244.1 MGP_WSBEiJ_G0017391.1 mouse_genomes_project 11 3370419 3380753 + MGP_WSBEiJ_P0027244 Zmiz2 protein_coding protein_coding MGP_WSBEiJ_T0027245.1 MGP_WSBEiJ_G0017391.1 mouse_genomes_project 11 3371543 3372663 + Zmiz2 protein_coding retained_intron MGP_WSBEiJ_T0029790.1 MGP_WSBEiJ_G0018023.1 mouse_genomes_project 11 73353458 73374140 + MGP_WSBEiJ_P0029790 Spata22 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029791.1 MGP_WSBEiJ_G0018023.1 mouse_genomes_project 11 73356548 73385227 + MGP_WSBEiJ_P0029791 Spata22 protein_coding protein_coding MGP_WSBEiJ_T0012483.1 MGP_WSBEiJ_G0010613.1 mouse_genomes_project 11 108067798 108068807 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031189.1 MGP_WSBEiJ_G0018382.1 mouse_genomes_project 11 98568374 98587729 - MGP_WSBEiJ_P0031189 Tbx21 protein_coding protein_coding MGP_WSBEiJ_T0003298.1 MGP_WSBEiJ_G0003042.1 mouse_genomes_project 11 124166761 124167682 + Gm28192 antisense antisense MGP_WSBEiJ_T0098920.1 MGP_WSBEiJ_G0037583.1 mouse_genomes_project 11 55190206 55190272 - Gm24253 snoRNA snoRNA MGP_WSBEiJ_T0009573.1 MGP_WSBEiJ_G0007730.1 mouse_genomes_project 11 79124555 79124650 - Gm23840 miRNA miRNA MGP_WSBEiJ_T0097725.1 MGP_WSBEiJ_G0036388.1 mouse_genomes_project 11 88572789 88572889 - Gm25968 snRNA snRNA MGP_WSBEiJ_T0028356.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53109376 53174379 + MGP_WSBEiJ_P0028356 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028357.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53109583 53171158 + MGP_WSBEiJ_P0028357 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028358.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53109600 53132714 + MGP_WSBEiJ_P0028358 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028359.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53109780 53174375 + MGP_WSBEiJ_P0028359 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028360.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53109780 53171162 + MGP_WSBEiJ_P0028360 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028361.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53119251 53132161 + MGP_WSBEiJ_P0028361 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028362.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53120471 53170821 + MGP_WSBEiJ_P0028362 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028363.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53120511 53171158 + MGP_WSBEiJ_P0028363 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028364.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53120511 53171158 + MGP_WSBEiJ_P0028364 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028365.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53120563 53148052 + MGP_WSBEiJ_P0028365 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028366.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53120563 53146502 + MGP_WSBEiJ_P0028366 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028367.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53125443 53171124 + MGP_WSBEiJ_P0028367 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028368.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53125739 53147845 + MGP_WSBEiJ_P0028368 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0028369.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53144270 53171162 + Acsl6 protein_coding processed_transcript MGP_WSBEiJ_T0028370.1 MGP_WSBEiJ_G0017678.1 mouse_genomes_project 11 53155560 53171151 + MGP_WSBEiJ_P0028370 Acsl6 protein_coding protein_coding MGP_WSBEiJ_T0100213.1 MGP_WSBEiJ_G0038769.1 mouse_genomes_project 11 2718767 2741614 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100214.1 MGP_WSBEiJ_G0038769.1 mouse_genomes_project 11 2718788 2741978 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100215.1 MGP_WSBEiJ_G0038769.1 mouse_genomes_project 11 2718788 2744453 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100216.1 MGP_WSBEiJ_G0038769.1 mouse_genomes_project 11 2718855 2743680 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100217.1 MGP_WSBEiJ_G0038769.1 mouse_genomes_project 11 2724300 2744171 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0009545.1 MGP_WSBEiJ_G0007702.1 mouse_genomes_project 11 67826020 67826141 + Mir6406 miRNA miRNA MGP_WSBEiJ_T0000818.1 MGP_WSBEiJ_G0000757.1 mouse_genomes_project 11 43518835 43544482 - TEC TEC MGP_WSBEiJ_T0033028.1 MGP_WSBEiJ_G0018815.1 mouse_genomes_project 11 121031626 121074554 + MGP_WSBEiJ_P0033028 Pgs1 protein_coding protein_coding MGP_WSBEiJ_T0033029.1 MGP_WSBEiJ_G0018815.1 mouse_genomes_project 11 121032219 121074554 + MGP_WSBEiJ_P0033029 Pgs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033030.1 MGP_WSBEiJ_G0018815.1 mouse_genomes_project 11 121046869 121074468 + MGP_WSBEiJ_P0033030 Pgs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033031.1 MGP_WSBEiJ_G0018815.1 mouse_genomes_project 11 121061544 121074554 + Pgs1 protein_coding retained_intron MGP_WSBEiJ_T0031667.1 MGP_WSBEiJ_G0018534.1 mouse_genomes_project 11 102964043 102967657 - MGP_WSBEiJ_P0031667 Psmc3ip protein_coding protein_coding MGP_WSBEiJ_T0031668.1 MGP_WSBEiJ_G0018534.1 mouse_genomes_project 11 102964352 102967621 - Psmc3ip protein_coding retained_intron MGP_WSBEiJ_T0031669.1 MGP_WSBEiJ_G0018534.1 mouse_genomes_project 11 102964377 102966381 - Psmc3ip protein_coding retained_intron MGP_WSBEiJ_T0031670.1 MGP_WSBEiJ_G0018534.1 mouse_genomes_project 11 102964707 102967597 - MGP_WSBEiJ_P0031670 Psmc3ip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031523.1 MGP_WSBEiJ_G0018502.1 mouse_genomes_project 11 102079584 102082671 - Krt42 protein_coding retained_intron MGP_WSBEiJ_T0031524.1 MGP_WSBEiJ_G0018502.1 mouse_genomes_project 11 102079589 102086557 - MGP_WSBEiJ_P0031524 Krt42 protein_coding protein_coding MGP_WSBEiJ_T0003079.1 MGP_WSBEiJ_G0002866.1 mouse_genomes_project 11 44630083 44632813 + Gm12167 antisense antisense MGP_WSBEiJ_T0096915.1 MGP_WSBEiJ_G0035596.1 mouse_genomes_project 11 74408130 74408249 + n-R5s71 rRNA rRNA MGP_WSBEiJ_T0098892.1 MGP_WSBEiJ_G0037555.1 mouse_genomes_project 11 2508095 2508225 - Gm22471 snoRNA snoRNA MGP_WSBEiJ_T0006100.1 MGP_WSBEiJ_G0005095.1 mouse_genomes_project 11 21496916 21497725 + Gm12063 lincRNA lincRNA MGP_WSBEiJ_T0032212.1 MGP_WSBEiJ_G0018644.1 mouse_genomes_project 11 108196841 108207569 + MGP_WSBEiJ_P0032212 Ace3 protein_coding protein_coding MGP_WSBEiJ_T0009586.1 MGP_WSBEiJ_G0007743.1 mouse_genomes_project 11 97721662 97721772 + Mir10a miRNA miRNA MGP_WSBEiJ_T0027085.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1676111 1761826 - MGP_WSBEiJ_P0027085 Nf2 protein_coding protein_coding MGP_WSBEiJ_T0027086.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1676113 1762377 - MGP_WSBEiJ_P0027086 Nf2 protein_coding protein_coding MGP_WSBEiJ_T0027087.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1678227 1694673 - Nf2 protein_coding retained_intron MGP_WSBEiJ_T0027088.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1691501 1744917 - Nf2 protein_coding processed_transcript MGP_WSBEiJ_T0027089.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1694001 1726329 - MGP_WSBEiJ_P0027089 Nf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027090.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1700748 1762035 - MGP_WSBEiJ_P0027090 Nf2 protein_coding protein_coding MGP_WSBEiJ_T0027091.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1703958 1725404 - Nf2 protein_coding processed_transcript MGP_WSBEiJ_T0027092.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1704007 1728711 - MGP_WSBEiJ_P0027092 Nf2 protein_coding protein_coding MGP_WSBEiJ_T0027093.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1709608 1730557 - MGP_WSBEiJ_P0027093 Nf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027094.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1728668 1736545 - Nf2 protein_coding processed_transcript MGP_WSBEiJ_T0027095.1 MGP_WSBEiJ_G0017359.1 mouse_genomes_project 11 1741452 1761966 - MGP_WSBEiJ_P0027095 Nf2 protein_coding protein_coding MGP_WSBEiJ_T0006099.1 MGP_WSBEiJ_G0005094.1 mouse_genomes_project 11 20538868 20558789 + 1700061J23Rik lincRNA lincRNA MGP_WSBEiJ_T0031484.1 MGP_WSBEiJ_G0018471.1 mouse_genomes_project 11 101412238 101413250 - MGP_WSBEiJ_P0031484 Gm11563 protein_coding protein_coding MGP_WSBEiJ_T0031930.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104404043 104412395 + MGP_WSBEiJ_P0031930 Rundc3a protein_coding protein_coding MGP_WSBEiJ_T0031931.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104404043 104412395 + MGP_WSBEiJ_P0031931 Rundc3a protein_coding protein_coding MGP_WSBEiJ_T0031932.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104404043 104412395 + MGP_WSBEiJ_P0031932 Rundc3a protein_coding protein_coding MGP_WSBEiJ_T0031933.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104404043 104413196 + MGP_WSBEiJ_P0031933 Rundc3a protein_coding protein_coding MGP_WSBEiJ_T0031934.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104408504 104413196 + Rundc3a protein_coding retained_intron MGP_WSBEiJ_T0031935.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104408759 104410418 + Rundc3a protein_coding processed_transcript MGP_WSBEiJ_T0031936.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104409805 104412870 + Rundc3a protein_coding processed_transcript MGP_WSBEiJ_T0031937.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104410202 104412867 + Rundc3a protein_coding processed_transcript MGP_WSBEiJ_T0031938.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104410394 104412793 + Rundc3a protein_coding processed_transcript MGP_WSBEiJ_T0031939.1 MGP_WSBEiJ_G0018587.1 mouse_genomes_project 11 104410496 104411424 + Rundc3a protein_coding processed_transcript MGP_WSBEiJ_T0029968.1 MGP_WSBEiJ_G0018081.1 mouse_genomes_project 11 75854047 75883150 + MGP_WSBEiJ_P0029968 Crk protein_coding protein_coding MGP_WSBEiJ_T0029969.1 MGP_WSBEiJ_G0018081.1 mouse_genomes_project 11 75854072 75880740 + MGP_WSBEiJ_P0029969 Crk protein_coding protein_coding MGP_WSBEiJ_T0029970.1 MGP_WSBEiJ_G0018081.1 mouse_genomes_project 11 75854072 75883993 + MGP_WSBEiJ_P0029970 Crk protein_coding protein_coding MGP_WSBEiJ_T0029971.1 MGP_WSBEiJ_G0018081.1 mouse_genomes_project 11 75854099 75877684 + MGP_WSBEiJ_P0029971 Crk protein_coding protein_coding MGP_WSBEiJ_T0029972.1 MGP_WSBEiJ_G0018081.1 mouse_genomes_project 11 75854330 75877632 + MGP_WSBEiJ_P0029972 Crk protein_coding protein_coding MGP_WSBEiJ_T0098954.1 MGP_WSBEiJ_G0037617.1 mouse_genomes_project 11 104880291 104880428 + Gm22683 snoRNA snoRNA MGP_WSBEiJ_T0027823.1 MGP_WSBEiJ_G0017530.1 mouse_genomes_project 11 38808726 38815106 + MGP_WSBEiJ_P0027823 Nudcd2 protein_coding protein_coding MGP_WSBEiJ_T0027824.1 MGP_WSBEiJ_G0017530.1 mouse_genomes_project 11 38808803 38811472 + Nudcd2 protein_coding processed_transcript MGP_WSBEiJ_T0027825.1 MGP_WSBEiJ_G0017530.1 mouse_genomes_project 11 38809005 38814610 + MGP_WSBEiJ_P0027825 Nudcd2 protein_coding protein_coding MGP_WSBEiJ_T0027826.1 MGP_WSBEiJ_G0017530.1 mouse_genomes_project 11 38809264 38814543 + Nudcd2 protein_coding processed_transcript MGP_WSBEiJ_T0027827.1 MGP_WSBEiJ_G0017530.1 mouse_genomes_project 11 38811365 38814324 + Nudcd2 protein_coding processed_transcript MGP_WSBEiJ_T0012241.1 MGP_WSBEiJ_G0010371.1 mouse_genomes_project 11 14278666 14278821 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097675.1 MGP_WSBEiJ_G0036338.1 mouse_genomes_project 11 9201288 9201444 - Gm24036 snRNA snRNA MGP_WSBEiJ_T0012204.1 MGP_WSBEiJ_G0010334.1 mouse_genomes_project 11 290007 290483 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012286.1 MGP_WSBEiJ_G0010416.1 mouse_genomes_project 11 27356445 27358040 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009553.1 MGP_WSBEiJ_G0007710.1 mouse_genomes_project 11 70032260 70032385 - Mir497b miRNA miRNA MGP_WSBEiJ_T0097268.1 MGP_WSBEiJ_G0035948.1 mouse_genomes_project 11 80990848 80992545 - C030013C21Rik sense_intronic sense_intronic MGP_WSBEiJ_T0032567.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117988976 117993516 - MGP_WSBEiJ_P0032567 Nat9 protein_coding protein_coding MGP_WSBEiJ_T0032568.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117988976 117994005 - MGP_WSBEiJ_P0032568 Nat9 protein_coding protein_coding MGP_WSBEiJ_T0032569.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117988976 117993493 - MGP_WSBEiJ_P0032569 Nat9 protein_coding protein_coding MGP_WSBEiJ_T0032570.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117988976 117993551 - MGP_WSBEiJ_P0032570 Nat9 protein_coding protein_coding MGP_WSBEiJ_T0032571.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117990637 117993423 - Nat9 protein_coding processed_transcript MGP_WSBEiJ_T0032572.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117990741 117993242 - Nat9 protein_coding processed_transcript MGP_WSBEiJ_T0032573.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117990931 117994003 - Nat9 protein_coding processed_transcript MGP_WSBEiJ_T0032574.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117990932 117994020 - Nat9 protein_coding processed_transcript MGP_WSBEiJ_T0032575.1 MGP_WSBEiJ_G0018730.1 mouse_genomes_project 11 117991115 117993437 - Nat9 protein_coding processed_transcript MGP_WSBEiJ_T0096912.1 MGP_WSBEiJ_G0035593.1 mouse_genomes_project 11 59014603 59014740 + Gm24939 rRNA rRNA MGP_WSBEiJ_T0098905.1 MGP_WSBEiJ_G0037568.1 mouse_genomes_project 11 20565194 20565303 - Gm24398 snoRNA snoRNA MGP_WSBEiJ_T0009610.1 MGP_WSBEiJ_G0007767.1 mouse_genomes_project 11 109053707 109053808 - Gm25994 miRNA miRNA MGP_WSBEiJ_T0032549.1 MGP_WSBEiJ_G0018723.1 mouse_genomes_project 11 117772871 117780516 - MGP_WSBEiJ_P0032549 protein_coding protein_coding MGP_WSBEiJ_T0009556.1 MGP_WSBEiJ_G0007713.1 mouse_genomes_project 11 70250755 70250819 + Mir7115 miRNA miRNA MGP_WSBEiJ_T0026962.1 MGP_WSBEiJ_G0017328.1 mouse_genomes_project 11 311673 317560 + MGP_WSBEiJ_P0026962 Pla2g3 protein_coding protein_coding MGP_WSBEiJ_T0026963.1 MGP_WSBEiJ_G0017328.1 mouse_genomes_project 11 311688 322746 + MGP_WSBEiJ_P0026963 Pla2g3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026964.1 MGP_WSBEiJ_G0017328.1 mouse_genomes_project 11 312379 317557 + Pla2g3 protein_coding retained_intron MGP_WSBEiJ_T0098948.1 MGP_WSBEiJ_G0037611.1 mouse_genomes_project 11 97416236 97416451 + Gm24949 snoRNA snoRNA MGP_WSBEiJ_T0003211.1 MGP_WSBEiJ_G0002974.1 mouse_genomes_project 11 100210486 100211281 + antisense antisense MGP_WSBEiJ_T0027626.1 MGP_WSBEiJ_G0017479.1 mouse_genomes_project 11 27211599 27245559 + MGP_WSBEiJ_P0027626 Clhc1 protein_coding protein_coding MGP_WSBEiJ_T0027627.1 MGP_WSBEiJ_G0017479.1 mouse_genomes_project 11 27228001 27245538 + Clhc1 protein_coding processed_transcript MGP_WSBEiJ_T0027628.1 MGP_WSBEiJ_G0017479.1 mouse_genomes_project 11 27228018 27245396 + Clhc1 protein_coding processed_transcript MGP_WSBEiJ_T0003225.1 MGP_WSBEiJ_G0002983.1 mouse_genomes_project 11 103369854 103370669 - Gm11626 antisense antisense MGP_WSBEiJ_T0028937.1 MGP_WSBEiJ_G0017829.1 mouse_genomes_project 11 62457329 62494438 + MGP_WSBEiJ_P0028937 Tekt3 protein_coding protein_coding MGP_WSBEiJ_T0012208.1 MGP_WSBEiJ_G0010338.1 mouse_genomes_project 11 720629 721446 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012413.1 MGP_WSBEiJ_G0010543.1 mouse_genomes_project 11 78940095 78941214 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097685.1 MGP_WSBEiJ_G0036348.1 mouse_genomes_project 11 26990980 26991106 + Gm23109 snRNA snRNA MGP_WSBEiJ_T0028672.1 MGP_WSBEiJ_G0017776.1 mouse_genomes_project 11 59585906 59606183 + MGP_WSBEiJ_P0028672 Lrrc48 protein_coding protein_coding MGP_WSBEiJ_T0028673.1 MGP_WSBEiJ_G0017776.1 mouse_genomes_project 11 59585906 59628896 + MGP_WSBEiJ_P0028673 Lrrc48 protein_coding protein_coding MGP_WSBEiJ_T0028674.1 MGP_WSBEiJ_G0017776.1 mouse_genomes_project 11 59585906 59612059 + MGP_WSBEiJ_P0028674 Lrrc48 protein_coding protein_coding MGP_WSBEiJ_T0028675.1 MGP_WSBEiJ_G0017776.1 mouse_genomes_project 11 59585934 59609919 + Lrrc48 protein_coding processed_transcript MGP_WSBEiJ_T0028676.1 MGP_WSBEiJ_G0017776.1 mouse_genomes_project 11 59585957 59628888 + MGP_WSBEiJ_P0028676 Lrrc48 protein_coding protein_coding MGP_WSBEiJ_T0028207.1 MGP_WSBEiJ_G0017639.1 mouse_genomes_project 11 50388240 50417391 + MGP_WSBEiJ_P0028207 Sar1b protein_coding protein_coding MGP_WSBEiJ_T0028208.1 MGP_WSBEiJ_G0017639.1 mouse_genomes_project 11 50388247 50407368 + Sar1b protein_coding processed_transcript MGP_WSBEiJ_T0009530.1 MGP_WSBEiJ_G0007687.1 mouse_genomes_project 11 50774642 50774733 + Mir3061 miRNA miRNA MGP_WSBEiJ_T0012293.1 MGP_WSBEiJ_G0010423.1 mouse_genomes_project 11 28524792 28525154 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027068.1 MGP_WSBEiJ_G0017353.1 mouse_genomes_project 11 1364130 1488398 - MGP_WSBEiJ_P0027068 Mtmr3 protein_coding protein_coding MGP_WSBEiJ_T0027069.1 MGP_WSBEiJ_G0017353.1 mouse_genomes_project 11 1364137 1371629 - Mtmr3 protein_coding processed_transcript MGP_WSBEiJ_T0027070.1 MGP_WSBEiJ_G0017353.1 mouse_genomes_project 11 1364137 1434477 - MGP_WSBEiJ_P0027070 Mtmr3 protein_coding protein_coding MGP_WSBEiJ_T0027071.1 MGP_WSBEiJ_G0017353.1 mouse_genomes_project 11 1364152 1416605 - MGP_WSBEiJ_P0027071 Mtmr3 protein_coding protein_coding MGP_WSBEiJ_T0027072.1 MGP_WSBEiJ_G0017353.1 mouse_genomes_project 11 1365821 1488446 - MGP_WSBEiJ_P0027072 Mtmr3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027073.1 MGP_WSBEiJ_G0017353.1 mouse_genomes_project 11 1366014 1416605 - MGP_WSBEiJ_P0027073 Mtmr3 protein_coding protein_coding MGP_WSBEiJ_T0027074.1 MGP_WSBEiJ_G0017353.1 mouse_genomes_project 11 1375069 1376581 - Mtmr3 protein_coding processed_transcript MGP_WSBEiJ_T0028176.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50205946 50226547 + MGP_WSBEiJ_P0028176 Phykpl protein_coding protein_coding MGP_WSBEiJ_T0028177.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50205946 50225313 + MGP_WSBEiJ_P0028177 Phykpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028178.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50205978 50223389 + MGP_WSBEiJ_P0028178 Phykpl protein_coding protein_coding MGP_WSBEiJ_T0028179.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50205992 50219071 + Phykpl protein_coding retained_intron MGP_WSBEiJ_T0028180.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50205996 50208507 + Phykpl protein_coding retained_intron MGP_WSBEiJ_T0028181.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50206000 50214489 + Phykpl protein_coding retained_intron MGP_WSBEiJ_T0028182.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50206010 50221707 + MGP_WSBEiJ_P0028182 Phykpl protein_coding unknown_likely_coding MGP_WSBEiJ_T0028183.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50212629 50215064 + Phykpl protein_coding retained_intron MGP_WSBEiJ_T0028184.1 MGP_WSBEiJ_G0017631.1 mouse_genomes_project 11 50221327 50223128 + Phykpl protein_coding retained_intron MGP_WSBEiJ_T0028505.1 MGP_WSBEiJ_G0017722.1 mouse_genomes_project 11 57593708 57595993 - MGP_WSBEiJ_P0028505 Olfr329-ps protein_coding protein_coding MGP_WSBEiJ_T0030128.1 MGP_WSBEiJ_G0018116.1 mouse_genomes_project 11 78081875 78085284 - MGP_WSBEiJ_P0030128 Gm10277 protein_coding protein_coding MGP_WSBEiJ_T0009544.1 MGP_WSBEiJ_G0007701.1 mouse_genomes_project 11 66646992 66647064 + Mir6923 miRNA miRNA MGP_WSBEiJ_T0012308.1 MGP_WSBEiJ_G0010438.1 mouse_genomes_project 11 37814838 37815478 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030042.1 MGP_WSBEiJ_G0018097.1 mouse_genomes_project 11 76910520 76929824 + MGP_WSBEiJ_P0030042 Tusc5 protein_coding protein_coding MGP_WSBEiJ_T0031824.1 MGP_WSBEiJ_G0018568.1 mouse_genomes_project 11 103931999 103937497 - MGP_WSBEiJ_P0031824 Sost protein_coding protein_coding MGP_WSBEiJ_T0029162.1 MGP_WSBEiJ_G0017884.1 mouse_genomes_project 11 68840305 68854500 + MGP_WSBEiJ_P0029162 Alox12b protein_coding protein_coding MGP_WSBEiJ_T0029481.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70245153 70248501 + Arrb2 protein_coding retained_intron MGP_WSBEiJ_T0029482.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70245155 70253174 + MGP_WSBEiJ_P0029482 Arrb2 protein_coding protein_coding MGP_WSBEiJ_T0029483.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70245155 70253174 + MGP_WSBEiJ_P0029483 Arrb2 protein_coding protein_coding MGP_WSBEiJ_T0029484.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70245163 70253328 + MGP_WSBEiJ_P0029484 Arrb2 protein_coding protein_coding MGP_WSBEiJ_T0029485.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70245195 70250111 + MGP_WSBEiJ_P0029485 Arrb2 protein_coding protein_coding MGP_WSBEiJ_T0029486.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70245200 70251248 + MGP_WSBEiJ_P0029486 Arrb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029487.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70245249 70253303 + MGP_WSBEiJ_P0029487 Arrb2 protein_coding protein_coding MGP_WSBEiJ_T0029488.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70249203 70252733 + Arrb2 protein_coding retained_intron MGP_WSBEiJ_T0029489.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70249406 70251223 + Arrb2 protein_coding retained_intron MGP_WSBEiJ_T0029490.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70249795 70252053 + Arrb2 protein_coding retained_intron MGP_WSBEiJ_T0029491.1 MGP_WSBEiJ_G0017956.1 mouse_genomes_project 11 70251082 70252728 + Arrb2 protein_coding retained_intron MGP_WSBEiJ_T0030997.1 MGP_WSBEiJ_G0018329.1 mouse_genomes_project 11 96287216 96304352 - MGP_WSBEiJ_P0030997 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030998.1 MGP_WSBEiJ_G0018329.1 mouse_genomes_project 11 96287222 96295085 - MGP_WSBEiJ_P0030998 protein_coding protein_coding MGP_WSBEiJ_T0031000.1 MGP_WSBEiJ_G0018329.1 mouse_genomes_project 11 96296634 96297898 - MGP_WSBEiJ_P0031000 protein_coding protein_coding MGP_WSBEiJ_T0030599.1 MGP_WSBEiJ_G0018236.1 mouse_genomes_project 11 85647206 85653736 - MGP_WSBEiJ_P0030599 Znhit3 protein_coding protein_coding MGP_WSBEiJ_T0030600.1 MGP_WSBEiJ_G0018236.1 mouse_genomes_project 11 85648400 85653719 - Znhit3 protein_coding processed_transcript MGP_WSBEiJ_T0030601.1 MGP_WSBEiJ_G0018236.1 mouse_genomes_project 11 85648578 85653736 - Znhit3 protein_coding processed_transcript MGP_WSBEiJ_T0030602.1 MGP_WSBEiJ_G0018236.1 mouse_genomes_project 11 85648614 85653675 - Znhit3 protein_coding processed_transcript MGP_WSBEiJ_T0097698.1 MGP_WSBEiJ_G0036361.1 mouse_genomes_project 11 60617567 60617674 + Gm25929 snRNA snRNA MGP_WSBEiJ_T0027320.1 MGP_WSBEiJ_G0017411.1 mouse_genomes_project 11 6269702 6302964 + Abca13 protein_coding processed_transcript MGP_WSBEiJ_T0027321.1 MGP_WSBEiJ_G0017411.1 mouse_genomes_project 11 6269702 6784829 + MGP_WSBEiJ_P0027321 Abca13 protein_coding protein_coding MGP_WSBEiJ_T0027322.1 MGP_WSBEiJ_G0017411.1 mouse_genomes_project 11 6271212 6341037 + MGP_WSBEiJ_P0027322 Abca13 protein_coding protein_coding MGP_WSBEiJ_T0027246.1 MGP_WSBEiJ_G0017392.1 mouse_genomes_project 11 3390032 3394760 + MGP_WSBEiJ_P0027246 Ppia protein_coding protein_coding MGP_WSBEiJ_T0027247.1 MGP_WSBEiJ_G0017392.1 mouse_genomes_project 11 3390457 3393027 + Ppia protein_coding retained_intron MGP_WSBEiJ_T0027248.1 MGP_WSBEiJ_G0017392.1 mouse_genomes_project 11 3390465 3394641 + Ppia protein_coding retained_intron MGP_WSBEiJ_T0027249.1 MGP_WSBEiJ_G0017392.1 mouse_genomes_project 11 3390465 3394755 + Ppia protein_coding retained_intron MGP_WSBEiJ_T0012331.1 MGP_WSBEiJ_G0010461.1 mouse_genomes_project 11 47870467 47871379 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028823.1 MGP_WSBEiJ_G0017808.1 mouse_genomes_project 11 61016409 61051804 - Prpsap2 protein_coding processed_transcript MGP_WSBEiJ_T0028824.1 MGP_WSBEiJ_G0017808.1 mouse_genomes_project 11 61017897 61051854 - MGP_WSBEiJ_P0028824 Prpsap2 protein_coding protein_coding MGP_WSBEiJ_T0028825.1 MGP_WSBEiJ_G0017808.1 mouse_genomes_project 11 61017903 61051880 - MGP_WSBEiJ_P0028825 Prpsap2 protein_coding protein_coding MGP_WSBEiJ_T0028826.1 MGP_WSBEiJ_G0017808.1 mouse_genomes_project 11 61018684 61051884 - MGP_WSBEiJ_P0028826 Prpsap2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028827.1 MGP_WSBEiJ_G0017808.1 mouse_genomes_project 11 61045259 61051832 - Prpsap2 protein_coding processed_transcript MGP_WSBEiJ_T0009520.1 MGP_WSBEiJ_G0007677.1 mouse_genomes_project 11 41506782 41506847 - Mir146 miRNA miRNA MGP_WSBEiJ_T0097716.1 MGP_WSBEiJ_G0036379.1 mouse_genomes_project 11 83199769 83199876 - Gm24612 snRNA snRNA MGP_WSBEiJ_T0100466.1 MGP_WSBEiJ_G0038925.1 mouse_genomes_project 11 47436131 47437391 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097687.1 MGP_WSBEiJ_G0036350.1 mouse_genomes_project 11 34675121 34675227 + Gm22127 snRNA snRNA MGP_WSBEiJ_T0009534.1 MGP_WSBEiJ_G0007691.1 mouse_genomes_project 11 54384830 54384886 + Mir7652 miRNA miRNA MGP_WSBEiJ_T0011107.1 MGP_WSBEiJ_G0009264.1 mouse_genomes_project 11 59318547 59318674 + Gm27511 misc_RNA misc_RNA MGP_WSBEiJ_T0028033.1 MGP_WSBEiJ_G0017594.1 mouse_genomes_project 11 47908549 47909485 + MGP_WSBEiJ_P0028033 Olfr1388 protein_coding protein_coding MGP_WSBEiJ_T0031147.1 MGP_WSBEiJ_G0018372.1 mouse_genomes_project 11 98299637 98301344 + Copz2 protein_coding retained_intron MGP_WSBEiJ_T0031148.1 MGP_WSBEiJ_G0018372.1 mouse_genomes_project 11 98299643 98311889 + MGP_WSBEiJ_P0031148 Copz2 protein_coding protein_coding MGP_WSBEiJ_T0031149.1 MGP_WSBEiJ_G0018372.1 mouse_genomes_project 11 98299648 98303879 + MGP_WSBEiJ_P0031149 Copz2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031150.1 MGP_WSBEiJ_G0018372.1 mouse_genomes_project 11 98303625 98306673 + Copz2 protein_coding retained_intron MGP_WSBEiJ_T0031151.1 MGP_WSBEiJ_G0018372.1 mouse_genomes_project 11 98303856 98311889 + MGP_WSBEiJ_P0031151 Copz2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012354.1 MGP_WSBEiJ_G0010484.1 mouse_genomes_project 11 56846144 56846435 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028705.1 MGP_WSBEiJ_G0017785.1 mouse_genomes_project 11 59977518 59982074 + MGP_WSBEiJ_P0028705 Mief2 protein_coding protein_coding MGP_WSBEiJ_T0028706.1 MGP_WSBEiJ_G0017785.1 mouse_genomes_project 11 59977563 59980119 + Mief2 protein_coding retained_intron MGP_WSBEiJ_T0028707.1 MGP_WSBEiJ_G0017785.1 mouse_genomes_project 11 59977565 59979786 + Mief2 protein_coding processed_transcript MGP_WSBEiJ_T0012369.1 MGP_WSBEiJ_G0010499.1 mouse_genomes_project 11 60698499 60698898 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029934.1 MGP_WSBEiJ_G0018076.1 mouse_genomes_project 11 75669558 75684296 + MGP_WSBEiJ_P0029934 Scarf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029935.1 MGP_WSBEiJ_G0018076.1 mouse_genomes_project 11 75669561 75683909 + MGP_WSBEiJ_P0029935 Scarf1 protein_coding protein_coding MGP_WSBEiJ_T0027560.1 MGP_WSBEiJ_G0017466.1 mouse_genomes_project 11 23068661 23113313 - 5730522E02Rik protein_coding processed_transcript MGP_WSBEiJ_T0027561.1 MGP_WSBEiJ_G0017466.1 mouse_genomes_project 11 23068713 23084143 - 5730522E02Rik protein_coding processed_transcript MGP_WSBEiJ_T0027562.1 MGP_WSBEiJ_G0017466.1 mouse_genomes_project 11 23081707 23694072 - 5730522E02Rik protein_coding processed_transcript MGP_WSBEiJ_T0027563.1 MGP_WSBEiJ_G0017466.1 mouse_genomes_project 11 23083131 23694075 - MGP_WSBEiJ_P0027563 5730522E02Rik protein_coding protein_coding MGP_WSBEiJ_T0027564.1 MGP_WSBEiJ_G0017466.1 mouse_genomes_project 11 23099496 23118355 - 5730522E02Rik protein_coding processed_transcript MGP_WSBEiJ_T0027565.1 MGP_WSBEiJ_G0017466.1 mouse_genomes_project 11 23113080 23240024 - MGP_WSBEiJ_P0027565 5730522E02Rik protein_coding protein_coding MGP_WSBEiJ_T0027566.1 MGP_WSBEiJ_G0017466.1 mouse_genomes_project 11 23318320 23560230 - 5730522E02Rik protein_coding processed_transcript MGP_WSBEiJ_T0027567.1 MGP_WSBEiJ_G0017466.1 mouse_genomes_project 11 23581788 23694266 - 5730522E02Rik protein_coding processed_transcript MGP_WSBEiJ_T0029843.1 MGP_WSBEiJ_G0018056.1 mouse_genomes_project 11 74763004 74770068 + Cluh protein_coding processed_transcript MGP_WSBEiJ_T0029844.1 MGP_WSBEiJ_G0018056.1 mouse_genomes_project 11 74763024 74783398 + MGP_WSBEiJ_P0029844 Cluh protein_coding protein_coding MGP_WSBEiJ_T0029845.1 MGP_WSBEiJ_G0018056.1 mouse_genomes_project 11 74763024 74784340 + MGP_WSBEiJ_P0029845 Cluh protein_coding protein_coding MGP_WSBEiJ_T0029846.1 MGP_WSBEiJ_G0018056.1 mouse_genomes_project 11 74763049 74784340 + Cluh protein_coding retained_intron MGP_WSBEiJ_T0029847.1 MGP_WSBEiJ_G0018056.1 mouse_genomes_project 11 74763339 74770856 + Cluh protein_coding processed_transcript MGP_WSBEiJ_T0029848.1 MGP_WSBEiJ_G0018056.1 mouse_genomes_project 11 74777973 74778800 + Cluh protein_coding retained_intron MGP_WSBEiJ_T0029319.1 MGP_WSBEiJ_G0017924.1 mouse_genomes_project 11 69621634 69632569 - MGP_WSBEiJ_P0029319 Tnk1 protein_coding protein_coding MGP_WSBEiJ_T0029320.1 MGP_WSBEiJ_G0017924.1 mouse_genomes_project 11 69621849 69629023 - MGP_WSBEiJ_P0029320 Tnk1 protein_coding protein_coding MGP_WSBEiJ_T0029321.1 MGP_WSBEiJ_G0017924.1 mouse_genomes_project 11 69622705 69627508 - MGP_WSBEiJ_P0029321 Tnk1 protein_coding protein_coding MGP_WSBEiJ_T0029322.1 MGP_WSBEiJ_G0017924.1 mouse_genomes_project 11 69625087 69632569 - MGP_WSBEiJ_P0029322 Tnk1 protein_coding protein_coding MGP_WSBEiJ_T0029323.1 MGP_WSBEiJ_G0017924.1 mouse_genomes_project 11 69627486 69632547 - MGP_WSBEiJ_P0029323 Tnk1 protein_coding protein_coding MGP_WSBEiJ_T0027949.1 MGP_WSBEiJ_G0017568.1 mouse_genomes_project 11 45034310 45059040 + MGP_WSBEiJ_P0027949 Havcr1 protein_coding protein_coding MGP_WSBEiJ_T0027950.1 MGP_WSBEiJ_G0017568.1 mouse_genomes_project 11 45039116 45074925 + MGP_WSBEiJ_P0027950 Havcr1 protein_coding protein_coding MGP_WSBEiJ_T0027951.1 MGP_WSBEiJ_G0017568.1 mouse_genomes_project 11 45053282 45074923 + MGP_WSBEiJ_P0027951 Havcr1 protein_coding protein_coding MGP_WSBEiJ_T0027952.1 MGP_WSBEiJ_G0017568.1 mouse_genomes_project 11 45053939 45074925 + MGP_WSBEiJ_P0027952 Havcr1 protein_coding protein_coding MGP_WSBEiJ_T0030820.1 MGP_WSBEiJ_G0018287.1 mouse_genomes_project 11 89959177 89983608 + MGP_WSBEiJ_P0030820 Coil protein_coding protein_coding MGP_WSBEiJ_T0030821.1 MGP_WSBEiJ_G0018287.1 mouse_genomes_project 11 89963454 89983608 + MGP_WSBEiJ_P0030821 Coil protein_coding protein_coding MGP_WSBEiJ_T0030822.1 MGP_WSBEiJ_G0018287.1 mouse_genomes_project 11 89978970 89982949 + Coil protein_coding retained_intron MGP_WSBEiJ_T0029270.1 MGP_WSBEiJ_G0017909.1 mouse_genomes_project 11 69433296 69442466 - MGP_WSBEiJ_P0029270 Senp3 protein_coding protein_coding MGP_WSBEiJ_T0029271.1 MGP_WSBEiJ_G0017909.1 mouse_genomes_project 11 69433297 69435158 - Senp3 protein_coding retained_intron MGP_WSBEiJ_T0029272.1 MGP_WSBEiJ_G0017909.1 mouse_genomes_project 11 69433302 69442704 - MGP_WSBEiJ_P0029272 Senp3 protein_coding protein_coding MGP_WSBEiJ_T0029273.1 MGP_WSBEiJ_G0017909.1 mouse_genomes_project 11 69433456 69438282 - Senp3 protein_coding retained_intron MGP_WSBEiJ_T0029274.1 MGP_WSBEiJ_G0017909.1 mouse_genomes_project 11 69433522 69438850 - MGP_WSBEiJ_P0029274 Senp3 protein_coding protein_coding MGP_WSBEiJ_T0029275.1 MGP_WSBEiJ_G0017909.1 mouse_genomes_project 11 69434134 69434625 - Senp3 protein_coding retained_intron MGP_WSBEiJ_T0029276.1 MGP_WSBEiJ_G0017909.1 mouse_genomes_project 11 69434414 69437129 - Senp3 protein_coding processed_transcript MGP_WSBEiJ_T0029277.1 MGP_WSBEiJ_G0017909.1 mouse_genomes_project 11 69437229 69438176 - Senp3 protein_coding retained_intron MGP_WSBEiJ_T0012260.1 MGP_WSBEiJ_G0010390.1 mouse_genomes_project 11 18599065 18599366 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031503.1 MGP_WSBEiJ_G0018490.1 mouse_genomes_project 11 101814294 101821247 - MGP_WSBEiJ_P0031503 protein_coding protein_coding MGP_WSBEiJ_T0012304.1 MGP_WSBEiJ_G0010434.1 mouse_genomes_project 11 33220424 33220896 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003070.1 MGP_WSBEiJ_G0002857.1 mouse_genomes_project 11 34014627 34018655 + Gm12126 antisense antisense MGP_WSBEiJ_T0028517.1 MGP_WSBEiJ_G0017730.1 mouse_genomes_project 11 57738860 57739988 + MGP_WSBEiJ_P0028517 protein_coding protein_coding MGP_WSBEiJ_T0006106.1 MGP_WSBEiJ_G0005101.1 mouse_genomes_project 11 22327403 22352841 - Gm12665 lincRNA lincRNA MGP_WSBEiJ_T0006107.1 MGP_WSBEiJ_G0005101.1 mouse_genomes_project 11 22327403 22352833 - Gm12665 lincRNA lincRNA MGP_WSBEiJ_T0031703.1 MGP_WSBEiJ_G0018543.1 mouse_genomes_project 11 103140558 103144883 + MGP_WSBEiJ_P0031703 Vps25 protein_coding protein_coding MGP_WSBEiJ_T0031704.1 MGP_WSBEiJ_G0018543.1 mouse_genomes_project 11 103140558 103146383 + MGP_WSBEiJ_P0031704 Vps25 protein_coding protein_coding MGP_WSBEiJ_T0031705.1 MGP_WSBEiJ_G0018543.1 mouse_genomes_project 11 103140580 103146379 + MGP_WSBEiJ_P0031705 Vps25 protein_coding protein_coding MGP_WSBEiJ_T0031706.1 MGP_WSBEiJ_G0018543.1 mouse_genomes_project 11 103140581 103145750 + MGP_WSBEiJ_P0031706 Vps25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031707.1 MGP_WSBEiJ_G0018543.1 mouse_genomes_project 11 103140586 103146157 + MGP_WSBEiJ_P0031707 Vps25 protein_coding protein_coding MGP_WSBEiJ_T0031708.1 MGP_WSBEiJ_G0018543.1 mouse_genomes_project 11 103140604 103145890 + MGP_WSBEiJ_P0031708 Vps25 protein_coding protein_coding MGP_WSBEiJ_T0031709.1 MGP_WSBEiJ_G0018543.1 mouse_genomes_project 11 103140615 103146044 + Vps25 protein_coding retained_intron MGP_WSBEiJ_T0027995.1 MGP_WSBEiJ_G0017585.1 mouse_genomes_project 11 47545292 47547390 - MGP_WSBEiJ_P0027995 protein_coding protein_coding MGP_WSBEiJ_T0009506.1 MGP_WSBEiJ_G0007663.1 mouse_genomes_project 11 13808519 13808620 - Gm24714 miRNA miRNA MGP_WSBEiJ_T0033478.1 MGP_WSBEiJ_G0018906.1 mouse_genomes_project 11 124728833 124738323 - MGP_WSBEiJ_P0033478 Zfp750 protein_coding protein_coding MGP_WSBEiJ_T0032289.1 MGP_WSBEiJ_G0018666.1 mouse_genomes_project 11 109014345 109035353 + MGP_WSBEiJ_P0032289 Milr1 protein_coding protein_coding MGP_WSBEiJ_T0032290.1 MGP_WSBEiJ_G0018666.1 mouse_genomes_project 11 109014359 109034082 + MGP_WSBEiJ_P0032290 Milr1 protein_coding protein_coding MGP_WSBEiJ_T0032291.1 MGP_WSBEiJ_G0018666.1 mouse_genomes_project 11 109014359 109033659 + MGP_WSBEiJ_P0032291 Milr1 protein_coding protein_coding MGP_WSBEiJ_T0032292.1 MGP_WSBEiJ_G0018666.1 mouse_genomes_project 11 109014359 109033659 + MGP_WSBEiJ_P0032292 Milr1 protein_coding protein_coding MGP_WSBEiJ_T0032293.1 MGP_WSBEiJ_G0018666.1 mouse_genomes_project 11 109014384 109035278 + MGP_WSBEiJ_P0032293 Milr1 protein_coding protein_coding MGP_WSBEiJ_T0032294.1 MGP_WSBEiJ_G0018666.1 mouse_genomes_project 11 109014387 109034324 + MGP_WSBEiJ_P0032294 Milr1 protein_coding protein_coding MGP_WSBEiJ_T0032295.1 MGP_WSBEiJ_G0018666.1 mouse_genomes_project 11 109014387 109035276 + MGP_WSBEiJ_P0032295 Milr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032296.1 MGP_WSBEiJ_G0018666.1 mouse_genomes_project 11 109018062 109035279 + MGP_WSBEiJ_P0032296 Milr1 protein_coding protein_coding MGP_WSBEiJ_T0028914.1 MGP_WSBEiJ_G0017824.1 mouse_genomes_project 11 62133559 62171831 - Zfp286 protein_coding processed_transcript MGP_WSBEiJ_T0028915.1 MGP_WSBEiJ_G0017824.1 mouse_genomes_project 11 62162537 62171835 - MGP_WSBEiJ_P0028915 Zfp286 protein_coding protein_coding MGP_WSBEiJ_T0028916.1 MGP_WSBEiJ_G0017824.1 mouse_genomes_project 11 62163581 62172268 - Zfp286 protein_coding processed_transcript MGP_WSBEiJ_T0028917.1 MGP_WSBEiJ_G0017824.1 mouse_genomes_project 11 62163590 62166999 - Zfp286 protein_coding processed_transcript MGP_WSBEiJ_T0028918.1 MGP_WSBEiJ_G0017824.1 mouse_genomes_project 11 62166363 62172260 - Zfp286 protein_coding processed_transcript MGP_WSBEiJ_T0028919.1 MGP_WSBEiJ_G0017824.1 mouse_genomes_project 11 62166363 62172237 - Zfp286 protein_coding processed_transcript MGP_WSBEiJ_T0028920.1 MGP_WSBEiJ_G0017824.1 mouse_genomes_project 11 62170425 62172274 - Zfp286 protein_coding processed_transcript MGP_WSBEiJ_T0028590.1 MGP_WSBEiJ_G0017760.1 mouse_genomes_project 11 58647448 58658717 - MGP_WSBEiJ_P0028590 Zfp867 protein_coding protein_coding MGP_WSBEiJ_T0030768.1 MGP_WSBEiJ_G0018273.1 mouse_genomes_project 11 88698045 88720455 - MGP_WSBEiJ_P0030768 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030769.1 MGP_WSBEiJ_G0018273.1 mouse_genomes_project 11 88707914 88708853 - protein_coding retained_intron MGP_WSBEiJ_T0030770.1 MGP_WSBEiJ_G0018273.1 mouse_genomes_project 11 88709081 88720554 - MGP_WSBEiJ_P0030770 protein_coding protein_coding MGP_WSBEiJ_T0027885.1 MGP_WSBEiJ_G0017548.1 mouse_genomes_project 11 42651453 42668381 - MGP_WSBEiJ_P0027885 Ublcp1 protein_coding protein_coding MGP_WSBEiJ_T0027886.1 MGP_WSBEiJ_G0017548.1 mouse_genomes_project 11 42651570 42661595 - Ublcp1 protein_coding processed_transcript MGP_WSBEiJ_T0027887.1 MGP_WSBEiJ_G0017548.1 mouse_genomes_project 11 42652274 42659191 - Ublcp1 protein_coding processed_transcript MGP_WSBEiJ_T0030287.1 MGP_WSBEiJ_G0018149.1 mouse_genomes_project 11 78928880 79065135 - MGP_WSBEiJ_P0030287 Nlk protein_coding protein_coding MGP_WSBEiJ_T0030288.1 MGP_WSBEiJ_G0018149.1 mouse_genomes_project 11 78929114 78931528 - Nlk protein_coding processed_transcript MGP_WSBEiJ_T0030289.1 MGP_WSBEiJ_G0018149.1 mouse_genomes_project 11 78929126 78935018 - MGP_WSBEiJ_P0030289 Nlk protein_coding protein_coding MGP_WSBEiJ_T0031482.1 MGP_WSBEiJ_G0018469.1 mouse_genomes_project 11 101395926 101396820 - MGP_WSBEiJ_P0031482 protein_coding protein_coding MGP_WSBEiJ_T0012251.1 MGP_WSBEiJ_G0010381.1 mouse_genomes_project 11 17013957 17014789 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031507.1 MGP_WSBEiJ_G0018493.1 mouse_genomes_project 11 101887393 101891456 - MGP_WSBEiJ_P0031507 Krt35 protein_coding protein_coding MGP_WSBEiJ_T0031508.1 MGP_WSBEiJ_G0018493.1 mouse_genomes_project 11 101887395 101891472 - Krt35 protein_coding retained_intron MGP_WSBEiJ_T0028899.1 MGP_WSBEiJ_G0017820.1 mouse_genomes_project 11 61968734 62015901 - MGP_WSBEiJ_P0028899 Lrrc75a protein_coding protein_coding MGP_WSBEiJ_T0028900.1 MGP_WSBEiJ_G0017820.1 mouse_genomes_project 11 61969673 62015418 - Lrrc75a protein_coding processed_transcript MGP_WSBEiJ_T0028901.1 MGP_WSBEiJ_G0017820.1 mouse_genomes_project 11 61969877 62015427 - Lrrc75a protein_coding processed_transcript MGP_WSBEiJ_T0028466.1 MGP_WSBEiJ_G0017707.1 mouse_genomes_project 11 57107688 57156218 - MGP_WSBEiJ_P0028466 Gemin5 protein_coding protein_coding MGP_WSBEiJ_T0028467.1 MGP_WSBEiJ_G0017707.1 mouse_genomes_project 11 57108977 57156218 - MGP_WSBEiJ_P0028467 Gemin5 protein_coding protein_coding MGP_WSBEiJ_T0028468.1 MGP_WSBEiJ_G0017707.1 mouse_genomes_project 11 57108977 57156218 - MGP_WSBEiJ_P0028468 Gemin5 protein_coding protein_coding MGP_WSBEiJ_T0028469.1 MGP_WSBEiJ_G0017707.1 mouse_genomes_project 11 57124572 57127242 - Gemin5 protein_coding processed_transcript MGP_WSBEiJ_T0028470.1 MGP_WSBEiJ_G0017707.1 mouse_genomes_project 11 57142554 57148445 - MGP_WSBEiJ_P0028470 Gemin5 protein_coding protein_coding MGP_WSBEiJ_T0033384.1 MGP_WSBEiJ_G0018884.1 mouse_genomes_project 11 123976080 123978142 + Gps1 protein_coding retained_intron MGP_WSBEiJ_T0033385.1 MGP_WSBEiJ_G0018884.1 mouse_genomes_project 11 123976083 123980906 + MGP_WSBEiJ_P0033385 Gps1 protein_coding protein_coding MGP_WSBEiJ_T0033386.1 MGP_WSBEiJ_G0018884.1 mouse_genomes_project 11 123976083 123980592 + MGP_WSBEiJ_P0033386 Gps1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033387.1 MGP_WSBEiJ_G0018884.1 mouse_genomes_project 11 123976357 123981000 + MGP_WSBEiJ_P0033387 Gps1 protein_coding protein_coding MGP_WSBEiJ_T0033388.1 MGP_WSBEiJ_G0018884.1 mouse_genomes_project 11 123978580 123979570 + Gps1 protein_coding retained_intron MGP_WSBEiJ_T0009601.1 MGP_WSBEiJ_G0007758.1 mouse_genomes_project 11 103330072 103330139 - Mir6929 miRNA miRNA MGP_WSBEiJ_T0032534.1 MGP_WSBEiJ_G0018719.1 mouse_genomes_project 11 117633309 117654256 + MGP_WSBEiJ_P0032534 Gprc5c protein_coding protein_coding MGP_WSBEiJ_T0032535.1 MGP_WSBEiJ_G0018719.1 mouse_genomes_project 11 117633316 117647624 + MGP_WSBEiJ_P0032535 Gprc5c protein_coding protein_coding MGP_WSBEiJ_T0032536.1 MGP_WSBEiJ_G0018719.1 mouse_genomes_project 11 117633704 117652998 + MGP_WSBEiJ_P0032536 Gprc5c protein_coding protein_coding MGP_WSBEiJ_T0032537.1 MGP_WSBEiJ_G0018719.1 mouse_genomes_project 11 117634014 117652999 + MGP_WSBEiJ_P0032537 Gprc5c protein_coding protein_coding MGP_WSBEiJ_T0032538.1 MGP_WSBEiJ_G0018719.1 mouse_genomes_project 11 117634044 117648238 + MGP_WSBEiJ_P0032538 Gprc5c protein_coding protein_coding MGP_WSBEiJ_T0032539.1 MGP_WSBEiJ_G0018719.1 mouse_genomes_project 11 117634483 117647788 + MGP_WSBEiJ_P0032539 Gprc5c protein_coding protein_coding MGP_WSBEiJ_T0032540.1 MGP_WSBEiJ_G0018719.1 mouse_genomes_project 11 117648382 117654510 + MGP_WSBEiJ_P0032540 Gprc5c protein_coding protein_coding MGP_WSBEiJ_T0027001.1 MGP_WSBEiJ_G0017337.1 mouse_genomes_project 11 778350 795448 - MGP_WSBEiJ_P0027001 Tcn2 protein_coding protein_coding MGP_WSBEiJ_T0027002.1 MGP_WSBEiJ_G0017337.1 mouse_genomes_project 11 778350 797311 - MGP_WSBEiJ_P0027002 Tcn2 protein_coding protein_coding MGP_WSBEiJ_T0027003.1 MGP_WSBEiJ_G0017337.1 mouse_genomes_project 11 778350 797510 - MGP_WSBEiJ_P0027003 Tcn2 protein_coding protein_coding MGP_WSBEiJ_T0027004.1 MGP_WSBEiJ_G0017337.1 mouse_genomes_project 11 778350 797429 - MGP_WSBEiJ_P0027004 Tcn2 protein_coding protein_coding MGP_WSBEiJ_T0027005.1 MGP_WSBEiJ_G0017337.1 mouse_genomes_project 11 778350 797395 - MGP_WSBEiJ_P0027005 Tcn2 protein_coding protein_coding MGP_WSBEiJ_T0027006.1 MGP_WSBEiJ_G0017337.1 mouse_genomes_project 11 778350 797346 - MGP_WSBEiJ_P0027006 Tcn2 protein_coding protein_coding MGP_WSBEiJ_T0027007.1 MGP_WSBEiJ_G0017337.1 mouse_genomes_project 11 778350 795463 - MGP_WSBEiJ_P0027007 Tcn2 protein_coding protein_coding MGP_WSBEiJ_T0029168.1 MGP_WSBEiJ_G0017887.1 mouse_genomes_project 11 68944295 68964127 - MGP_WSBEiJ_P0029168 Gucy2e protein_coding protein_coding MGP_WSBEiJ_T0029169.1 MGP_WSBEiJ_G0017887.1 mouse_genomes_project 11 68944298 68964127 - MGP_WSBEiJ_P0029169 Gucy2e protein_coding protein_coding MGP_WSBEiJ_T0029170.1 MGP_WSBEiJ_G0017887.1 mouse_genomes_project 11 68947336 68964141 - MGP_WSBEiJ_P0029170 Gucy2e protein_coding protein_coding MGP_WSBEiJ_T0029171.1 MGP_WSBEiJ_G0017887.1 mouse_genomes_project 11 68953772 68964127 - Gucy2e protein_coding processed_transcript MGP_WSBEiJ_T0029812.1 MGP_WSBEiJ_G0018037.1 mouse_genomes_project 11 73925295 73926234 - MGP_WSBEiJ_P0029812 Olfr393 protein_coding protein_coding MGP_WSBEiJ_T0032100.1 MGP_WSBEiJ_G0018618.1 mouse_genomes_project 11 105623465 105706608 - MGP_WSBEiJ_P0032100 Gm884 protein_coding protein_coding MGP_WSBEiJ_T0029899.1 MGP_WSBEiJ_G0018067.1 mouse_genomes_project 11 75327826 75405405 + MGP_WSBEiJ_P0029899 Rtn4rl1 protein_coding protein_coding MGP_WSBEiJ_T0009509.1 MGP_WSBEiJ_G0007666.1 mouse_genomes_project 11 20906981 20907072 - miRNA miRNA MGP_WSBEiJ_T0029825.1 MGP_WSBEiJ_G0018046.1 mouse_genomes_project 11 74216180 74217192 + MGP_WSBEiJ_P0029825 Olfr402 protein_coding protein_coding MGP_WSBEiJ_T0012349.1 MGP_WSBEiJ_G0010479.1 mouse_genomes_project 11 53976593 53976836 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028771.1 MGP_WSBEiJ_G0017800.1 mouse_genomes_project 11 60723982 60729664 - MGP_WSBEiJ_P0028771 Rnf112 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028772.1 MGP_WSBEiJ_G0017800.1 mouse_genomes_project 11 60723982 60729546 - MGP_WSBEiJ_P0028772 Rnf112 protein_coding protein_coding MGP_WSBEiJ_T0028773.1 MGP_WSBEiJ_G0017800.1 mouse_genomes_project 11 60723983 60729647 - MGP_WSBEiJ_P0028773 Rnf112 protein_coding protein_coding MGP_WSBEiJ_T0028774.1 MGP_WSBEiJ_G0017800.1 mouse_genomes_project 11 60727586 60729672 - Rnf112 protein_coding processed_transcript MGP_WSBEiJ_T0028775.1 MGP_WSBEiJ_G0017800.1 mouse_genomes_project 11 60727804 60729460 - Rnf112 protein_coding processed_transcript MGP_WSBEiJ_T0028776.1 MGP_WSBEiJ_G0017800.1 mouse_genomes_project 11 60728276 60729483 - Rnf112 protein_coding processed_transcript MGP_WSBEiJ_T0028777.1 MGP_WSBEiJ_G0017800.1 mouse_genomes_project 11 60728457 60729474 - Rnf112 protein_coding processed_transcript MGP_WSBEiJ_T0097190.1 MGP_WSBEiJ_G0035871.1 mouse_genomes_project 11 69087381 69087525 - Gm23386 scaRNA scaRNA MGP_WSBEiJ_T0032145.1 MGP_WSBEiJ_G0018630.1 mouse_genomes_project 11 106641697 106689874 - MGP_WSBEiJ_P0032145 Cdc27 protein_coding protein_coding MGP_WSBEiJ_T0032146.1 MGP_WSBEiJ_G0018630.1 mouse_genomes_project 11 106643889 106689783 - MGP_WSBEiJ_P0032146 Cdc27 protein_coding protein_coding MGP_WSBEiJ_T0032147.1 MGP_WSBEiJ_G0018630.1 mouse_genomes_project 11 106647299 106652209 - Cdc27 protein_coding processed_transcript MGP_WSBEiJ_T0032148.1 MGP_WSBEiJ_G0018630.1 mouse_genomes_project 11 106659180 106689869 - MGP_WSBEiJ_P0032148 Cdc27 protein_coding protein_coding MGP_WSBEiJ_T0032149.1 MGP_WSBEiJ_G0018630.1 mouse_genomes_project 11 106670690 106690011 - Cdc27 protein_coding processed_transcript MGP_WSBEiJ_T0012448.1 MGP_WSBEiJ_G0010578.1 mouse_genomes_project 11 95792053 95837399 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030164.1 MGP_WSBEiJ_G0018120.1 mouse_genomes_project 11 78343421 78349012 + MGP_WSBEiJ_P0030164 Dhrs13 protein_coding protein_coding MGP_WSBEiJ_T0030165.1 MGP_WSBEiJ_G0018120.1 mouse_genomes_project 11 78343490 78348937 + MGP_WSBEiJ_P0030165 Dhrs13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030166.1 MGP_WSBEiJ_G0018120.1 mouse_genomes_project 11 78343493 78349010 + MGP_WSBEiJ_P0030166 Dhrs13 protein_coding protein_coding MGP_WSBEiJ_T0030167.1 MGP_WSBEiJ_G0018120.1 mouse_genomes_project 11 78343500 78344619 + MGP_WSBEiJ_P0030167 Dhrs13 protein_coding protein_coding MGP_WSBEiJ_T0029429.1 MGP_WSBEiJ_G0017943.1 mouse_genomes_project 11 69887679 69900921 + MGP_WSBEiJ_P0029429 Asgr2 protein_coding protein_coding MGP_WSBEiJ_T0029430.1 MGP_WSBEiJ_G0017943.1 mouse_genomes_project 11 69887783 69900451 + MGP_WSBEiJ_P0029430 Asgr2 protein_coding protein_coding MGP_WSBEiJ_T0029431.1 MGP_WSBEiJ_G0017943.1 mouse_genomes_project 11 69892734 69900896 + Asgr2 protein_coding retained_intron MGP_WSBEiJ_T0100505.1 MGP_WSBEiJ_G0038964.1 mouse_genomes_project 11 125082508 125086963 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0028197.1 MGP_WSBEiJ_G0017636.1 mouse_genomes_project 11 50276392 50283065 + MGP_WSBEiJ_P0028197 protein_coding protein_coding MGP_WSBEiJ_T0028198.1 MGP_WSBEiJ_G0017636.1 mouse_genomes_project 11 50276394 50283064 + MGP_WSBEiJ_P0028198 protein_coding protein_coding MGP_WSBEiJ_T0012490.1 MGP_WSBEiJ_G0010620.1 mouse_genomes_project 11 111377930 111379048 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027918.1 MGP_WSBEiJ_G0017558.1 mouse_genomes_project 11 44477713 44599060 - MGP_WSBEiJ_P0027918 Cyfip2 protein_coding protein_coding MGP_WSBEiJ_T0027919.1 MGP_WSBEiJ_G0017558.1 mouse_genomes_project 11 44477713 44598559 - MGP_WSBEiJ_P0027919 Cyfip2 protein_coding protein_coding MGP_WSBEiJ_T0027920.1 MGP_WSBEiJ_G0017558.1 mouse_genomes_project 11 44477718 44598495 - MGP_WSBEiJ_P0027920 Cyfip2 protein_coding protein_coding MGP_WSBEiJ_T0027921.1 MGP_WSBEiJ_G0017558.1 mouse_genomes_project 11 44479936 44554363 - MGP_WSBEiJ_P0027921 Cyfip2 protein_coding protein_coding MGP_WSBEiJ_T0027923.1 MGP_WSBEiJ_G0017558.1 mouse_genomes_project 11 44576427 44598421 - MGP_WSBEiJ_P0027923 Cyfip2 protein_coding protein_coding MGP_WSBEiJ_T0028902.1 MGP_WSBEiJ_G0017821.1 mouse_genomes_project 11 62016018 62036054 + MGP_WSBEiJ_P0028902 Mmgt2 protein_coding protein_coding MGP_WSBEiJ_T0028903.1 MGP_WSBEiJ_G0017821.1 mouse_genomes_project 11 62016167 62031596 + Mmgt2 protein_coding retained_intron MGP_WSBEiJ_T0028904.1 MGP_WSBEiJ_G0017821.1 mouse_genomes_project 11 62016171 62035984 + Mmgt2 protein_coding processed_transcript MGP_WSBEiJ_T0028905.1 MGP_WSBEiJ_G0017821.1 mouse_genomes_project 11 62016174 62035916 + Mmgt2 protein_coding processed_transcript MGP_WSBEiJ_T0028906.1 MGP_WSBEiJ_G0017821.1 mouse_genomes_project 11 62016185 62036124 + MGP_WSBEiJ_P0028906 Mmgt2 protein_coding protein_coding MGP_WSBEiJ_T0028907.1 MGP_WSBEiJ_G0017821.1 mouse_genomes_project 11 62016189 62036431 + MGP_WSBEiJ_P0028907 Mmgt2 protein_coding protein_coding MGP_WSBEiJ_T0028908.1 MGP_WSBEiJ_G0017821.1 mouse_genomes_project 11 62016803 62037549 + MGP_WSBEiJ_P0028908 Mmgt2 protein_coding protein_coding MGP_WSBEiJ_T0031251.1 MGP_WSBEiJ_G0018396.1 mouse_genomes_project 11 99218858 99227991 + MGP_WSBEiJ_P0031251 Psmb3 protein_coding protein_coding MGP_WSBEiJ_T0031252.1 MGP_WSBEiJ_G0018396.1 mouse_genomes_project 11 99218893 99223533 + Psmb3 protein_coding retained_intron MGP_WSBEiJ_T0031253.1 MGP_WSBEiJ_G0018396.1 mouse_genomes_project 11 99226576 99227991 + Psmb3 protein_coding retained_intron MGP_WSBEiJ_T0030544.1 MGP_WSBEiJ_G0018225.1 mouse_genomes_project 11 84748020 84768751 - MGP_WSBEiJ_P0030544 Dusp14 protein_coding protein_coding MGP_WSBEiJ_T0030545.1 MGP_WSBEiJ_G0018225.1 mouse_genomes_project 11 84748020 84768307 - MGP_WSBEiJ_P0030545 Dusp14 protein_coding protein_coding MGP_WSBEiJ_T0030546.1 MGP_WSBEiJ_G0018225.1 mouse_genomes_project 11 84748024 84768529 - MGP_WSBEiJ_P0030546 Dusp14 protein_coding protein_coding MGP_WSBEiJ_T0030547.1 MGP_WSBEiJ_G0018225.1 mouse_genomes_project 11 84748390 84767030 - MGP_WSBEiJ_P0030547 Dusp14 protein_coding protein_coding MGP_WSBEiJ_T0030548.1 MGP_WSBEiJ_G0018225.1 mouse_genomes_project 11 84748956 84769211 - MGP_WSBEiJ_P0030548 Dusp14 protein_coding protein_coding MGP_WSBEiJ_T0028329.1 MGP_WSBEiJ_G0017671.1 mouse_genomes_project 11 52728261 52774602 - MGP_WSBEiJ_P0028329 Slc22a21 protein_coding protein_coding MGP_WSBEiJ_T0028330.1 MGP_WSBEiJ_G0017671.1 mouse_genomes_project 11 52739208 52763889 - MGP_WSBEiJ_P0028330 Slc22a21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006288.1 MGP_WSBEiJ_G0005241.1 mouse_genomes_project 11 123092669 123096233 + Gm11766 lincRNA lincRNA MGP_WSBEiJ_T0030823.1 MGP_WSBEiJ_G0018288.1 mouse_genomes_project 11 89994139 90014832 + MGP_WSBEiJ_P0030823 Trim25 protein_coding protein_coding MGP_WSBEiJ_T0030824.1 MGP_WSBEiJ_G0018288.1 mouse_genomes_project 11 89994139 90014832 + MGP_WSBEiJ_P0030824 Trim25 protein_coding protein_coding MGP_WSBEiJ_T0030825.1 MGP_WSBEiJ_G0018288.1 mouse_genomes_project 11 89994139 90008318 + MGP_WSBEiJ_P0030825 Trim25 protein_coding protein_coding MGP_WSBEiJ_T0031291.1 MGP_WSBEiJ_G0018405.1 mouse_genomes_project 11 99529985 99539163 - MGP_WSBEiJ_P0031291 Arl5c protein_coding protein_coding MGP_WSBEiJ_T0031292.1 MGP_WSBEiJ_G0018405.1 mouse_genomes_project 11 99535517 99538911 - MGP_WSBEiJ_P0031292 Arl5c protein_coding protein_coding MGP_WSBEiJ_T0003089.1 MGP_WSBEiJ_G0002876.1 mouse_genomes_project 11 52190660 52191896 - Gm12212 antisense antisense MGP_WSBEiJ_T0032486.1 MGP_WSBEiJ_G0018708.1 mouse_genomes_project 11 116350539 116374446 - MGP_WSBEiJ_P0032486 Fam104a protein_coding protein_coding MGP_WSBEiJ_T0030696.1 MGP_WSBEiJ_G0018257.1 mouse_genomes_project 11 87870036 87910667 - MGP_WSBEiJ_P0030696 Gdpd1 protein_coding protein_coding MGP_WSBEiJ_T0027480.1 MGP_WSBEiJ_G0017449.1 mouse_genomes_project 11 20202159 20352828 - MGP_WSBEiJ_P0027480 Gm28048 protein_coding protein_coding MGP_WSBEiJ_T0031678.1 MGP_WSBEiJ_G0018538.1 mouse_genomes_project 11 103041162 103049461 - MGP_WSBEiJ_P0031678 Plekhh3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031679.1 MGP_WSBEiJ_G0018538.1 mouse_genomes_project 11 103041162 103049857 - MGP_WSBEiJ_P0031679 Plekhh3 protein_coding protein_coding MGP_WSBEiJ_T0031680.1 MGP_WSBEiJ_G0018538.1 mouse_genomes_project 11 103041162 103044104 - MGP_WSBEiJ_P0031680 Plekhh3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031681.1 MGP_WSBEiJ_G0018538.1 mouse_genomes_project 11 103041165 103049823 - MGP_WSBEiJ_P0031681 Plekhh3 protein_coding protein_coding MGP_WSBEiJ_T0031682.1 MGP_WSBEiJ_G0018538.1 mouse_genomes_project 11 103042650 103043808 - Plekhh3 protein_coding processed_transcript MGP_WSBEiJ_T0031683.1 MGP_WSBEiJ_G0018538.1 mouse_genomes_project 11 103045977 103048860 - MGP_WSBEiJ_P0031683 Plekhh3 protein_coding protein_coding MGP_WSBEiJ_T0031456.1 MGP_WSBEiJ_G0018446.1 mouse_genomes_project 11 101058359 101068999 - Krt26 protein_coding processed_transcript MGP_WSBEiJ_T0031457.1 MGP_WSBEiJ_G0018446.1 mouse_genomes_project 11 101058423 101069000 - MGP_WSBEiJ_P0031457 Krt26 protein_coding protein_coding MGP_WSBEiJ_T0027172.1 MGP_WSBEiJ_G0017374.1 mouse_genomes_project 11 2658801 2662508 - MGP_WSBEiJ_P0027172 Mrps24 protein_coding protein_coding MGP_WSBEiJ_T0027173.1 MGP_WSBEiJ_G0017374.1 mouse_genomes_project 11 2659147 2662488 - Mrps24 protein_coding retained_intron MGP_WSBEiJ_T0027174.1 MGP_WSBEiJ_G0017374.1 mouse_genomes_project 11 2659344 2670400 - Mrps24 protein_coding processed_transcript MGP_WSBEiJ_T0027175.1 MGP_WSBEiJ_G0017374.1 mouse_genomes_project 11 2659376 2662511 - Mrps24 protein_coding retained_intron MGP_WSBEiJ_T0027176.1 MGP_WSBEiJ_G0017374.1 mouse_genomes_project 11 2659481 2662463 - Mrps24 protein_coding retained_intron MGP_WSBEiJ_T0012395.1 MGP_WSBEiJ_G0010525.1 mouse_genomes_project 11 70727178 70728363 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012396.1 MGP_WSBEiJ_G0010526.1 mouse_genomes_project 11 70918730 70919439 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031480.1 MGP_WSBEiJ_G0018467.1 mouse_genomes_project 11 101371517 101374558 - MGP_WSBEiJ_P0031480 protein_coding protein_coding MGP_WSBEiJ_T0031504.1 MGP_WSBEiJ_G0018491.1 mouse_genomes_project 11 101840652 101844572 - MGP_WSBEiJ_P0031504 protein_coding protein_coding MGP_WSBEiJ_T0006081.1 MGP_WSBEiJ_G0005077.1 mouse_genomes_project 11 4304752 4324757 - Gm11986 lincRNA lincRNA MGP_WSBEiJ_T0027374.1 MGP_WSBEiJ_G0017421.1 mouse_genomes_project 11 13657115 13665060 - MGP_WSBEiJ_P0027374 Sec61g protein_coding protein_coding MGP_WSBEiJ_T0027375.1 MGP_WSBEiJ_G0017421.1 mouse_genomes_project 11 13657971 13664754 - MGP_WSBEiJ_P0027375 Sec61g protein_coding protein_coding MGP_WSBEiJ_T0027376.1 MGP_WSBEiJ_G0017421.1 mouse_genomes_project 11 13658220 13665060 - MGP_WSBEiJ_P0027376 Sec61g protein_coding protein_coding MGP_WSBEiJ_T0027377.1 MGP_WSBEiJ_G0017421.1 mouse_genomes_project 11 13658220 13665060 - MGP_WSBEiJ_P0027377 Sec61g protein_coding protein_coding MGP_WSBEiJ_T0027378.1 MGP_WSBEiJ_G0017421.1 mouse_genomes_project 11 13658225 13661631 - Sec61g protein_coding retained_intron MGP_WSBEiJ_T0027379.1 MGP_WSBEiJ_G0017421.1 mouse_genomes_project 11 13658233 13664657 - MGP_WSBEiJ_P0027379 Sec61g protein_coding protein_coding MGP_WSBEiJ_T0027380.1 MGP_WSBEiJ_G0017421.1 mouse_genomes_project 11 13662679 13664720 - Sec61g protein_coding retained_intron MGP_WSBEiJ_T0033133.1 MGP_WSBEiJ_G0018837.1 mouse_genomes_project 11 122518232 122624928 + MGP_WSBEiJ_P0033133 Rnf213 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033134.1 MGP_WSBEiJ_G0018837.1 mouse_genomes_project 11 122518232 122624916 + MGP_WSBEiJ_P0033134 Rnf213 protein_coding protein_coding MGP_WSBEiJ_T0033135.1 MGP_WSBEiJ_G0018837.1 mouse_genomes_project 11 122518232 122624919 + MGP_WSBEiJ_P0033135 Rnf213 protein_coding protein_coding MGP_WSBEiJ_T0033136.1 MGP_WSBEiJ_G0018837.1 mouse_genomes_project 11 122615546 122624918 + MGP_WSBEiJ_P0033136 Rnf213 protein_coding protein_coding MGP_WSBEiJ_T0016583.1 MGP_WSBEiJ_G0014582.1 mouse_genomes_project 11 39769276 40031889 + processed_transcript processed_transcript MGP_WSBEiJ_T0016584.1 MGP_WSBEiJ_G0014582.1 mouse_genomes_project 11 39950095 40036224 + processed_transcript processed_transcript MGP_WSBEiJ_T0016585.1 MGP_WSBEiJ_G0014582.1 mouse_genomes_project 11 40026099 40034218 + processed_transcript processed_transcript MGP_WSBEiJ_T0003115.1 MGP_WSBEiJ_G0002897.1 mouse_genomes_project 11 60176651 60187572 - Map2k3os antisense antisense MGP_WSBEiJ_T0006201.1 MGP_WSBEiJ_G0005178.1 mouse_genomes_project 11 83887240 83889530 + AI662270 lincRNA lincRNA MGP_WSBEiJ_T0006202.1 MGP_WSBEiJ_G0005178.1 mouse_genomes_project 11 83887240 83890265 + AI662270 lincRNA lincRNA MGP_WSBEiJ_T0006203.1 MGP_WSBEiJ_G0005178.1 mouse_genomes_project 11 83887813 83888254 + AI662270 lincRNA lincRNA MGP_WSBEiJ_T0028500.1 MGP_WSBEiJ_G0017718.1 mouse_genomes_project 11 57475504 57482957 - MGP_WSBEiJ_P0028500 4930504O13Rik protein_coding protein_coding MGP_WSBEiJ_T0016655.1 MGP_WSBEiJ_G0014621.1 mouse_genomes_project 11 99634022 99634990 - Gm11632 processed_transcript processed_transcript MGP_WSBEiJ_T0097699.1 MGP_WSBEiJ_G0036362.1 mouse_genomes_project 11 61236815 61236922 - Gm23721 snRNA snRNA MGP_WSBEiJ_T0003251.1 MGP_WSBEiJ_G0003007.1 mouse_genomes_project 11 109716534 109719722 + Gm11713 antisense antisense MGP_WSBEiJ_T0030332.1 MGP_WSBEiJ_G0018162.1 mouse_genomes_project 11 80010026 80125060 + MGP_WSBEiJ_P0030332 Rab11fip4 protein_coding protein_coding MGP_WSBEiJ_T0030333.1 MGP_WSBEiJ_G0018162.1 mouse_genomes_project 11 80086374 80109443 + MGP_WSBEiJ_P0030333 Rab11fip4 protein_coding protein_coding MGP_WSBEiJ_T0003172.1 MGP_WSBEiJ_G0002945.1 mouse_genomes_project 11 85993350 85993799 + Appbp2os antisense pseudogene MGP_WSBEiJ_T0003173.1 MGP_WSBEiJ_G0002945.1 mouse_genomes_project 11 85993746 85996881 + Appbp2os antisense antisense MGP_WSBEiJ_T0029703.1 MGP_WSBEiJ_G0018000.1 mouse_genomes_project 11 72362629 72388734 - MGP_WSBEiJ_P0029703 Smtnl2 protein_coding protein_coding MGP_WSBEiJ_T0029704.1 MGP_WSBEiJ_G0018000.1 mouse_genomes_project 11 72373847 72377082 - Smtnl2 protein_coding processed_transcript MGP_WSBEiJ_T0029705.1 MGP_WSBEiJ_G0018000.1 mouse_genomes_project 11 72375459 72376715 - Smtnl2 protein_coding processed_transcript MGP_WSBEiJ_T0031513.1 MGP_WSBEiJ_G0018496.1 mouse_genomes_project 11 101926455 101930626 - MGP_WSBEiJ_P0031513 Krt15 protein_coding protein_coding MGP_WSBEiJ_T0031514.1 MGP_WSBEiJ_G0018496.1 mouse_genomes_project 11 101927732 101929096 - Krt15 protein_coding retained_intron MGP_WSBEiJ_T0028130.1 MGP_WSBEiJ_G0017619.1 mouse_genomes_project 11 49373845 49386298 - MGP_WSBEiJ_P0028130 Zfp879 protein_coding protein_coding MGP_WSBEiJ_T0012428.1 MGP_WSBEiJ_G0010558.1 mouse_genomes_project 11 85818591 85819118 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100483.1 MGP_WSBEiJ_G0038942.1 mouse_genomes_project 11 74344671 74345681 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0032627.1 MGP_WSBEiJ_G0018743.1 mouse_genomes_project 11 118259758 118269330 + MGP_WSBEiJ_P0032627 Trim80 protein_coding protein_coding MGP_WSBEiJ_T0097746.1 MGP_WSBEiJ_G0036409.1 mouse_genomes_project 11 121239871 121239966 - Gm24060 snRNA snRNA MGP_WSBEiJ_T0027877.1 MGP_WSBEiJ_G0017545.1 mouse_genomes_project 11 41888503 41906604 - MGP_WSBEiJ_P0027877 Ttc1 protein_coding protein_coding MGP_WSBEiJ_T0027878.1 MGP_WSBEiJ_G0017545.1 mouse_genomes_project 11 41889000 41906578 - MGP_WSBEiJ_P0027878 Ttc1 protein_coding protein_coding MGP_WSBEiJ_T0027879.1 MGP_WSBEiJ_G0017545.1 mouse_genomes_project 11 41904023 41906588 - Ttc1 protein_coding processed_transcript MGP_WSBEiJ_T0029212.1 MGP_WSBEiJ_G0017897.1 mouse_genomes_project 11 69163666 69294603 - MGP_WSBEiJ_P0029212 Dnah2 protein_coding protein_coding MGP_WSBEiJ_T0029213.1 MGP_WSBEiJ_G0017897.1 mouse_genomes_project 11 69163666 69299155 - MGP_WSBEiJ_P0029213 Dnah2 protein_coding protein_coding MGP_WSBEiJ_T0029214.1 MGP_WSBEiJ_G0017897.1 mouse_genomes_project 11 69163850 69296564 - MGP_WSBEiJ_P0029214 Dnah2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029215.1 MGP_WSBEiJ_G0017897.1 mouse_genomes_project 11 69211254 69212339 - Dnah2 protein_coding processed_transcript MGP_WSBEiJ_T0029216.1 MGP_WSBEiJ_G0017897.1 mouse_genomes_project 11 69259094 69299157 - Dnah2 protein_coding processed_transcript MGP_WSBEiJ_T0029217.1 MGP_WSBEiJ_G0017897.1 mouse_genomes_project 11 69264435 69265184 - Dnah2 protein_coding processed_transcript MGP_WSBEiJ_T0031767.1 MGP_WSBEiJ_G0018559.1 mouse_genomes_project 11 103379436 103386061 + Rnd2 protein_coding processed_transcript MGP_WSBEiJ_T0031768.1 MGP_WSBEiJ_G0018559.1 mouse_genomes_project 11 103379921 103385313 + Rnd2 protein_coding processed_transcript MGP_WSBEiJ_T0031769.1 MGP_WSBEiJ_G0018559.1 mouse_genomes_project 11 103382612 103386061 + MGP_WSBEiJ_P0031769 Rnd2 protein_coding protein_coding MGP_WSBEiJ_T0026984.1 MGP_WSBEiJ_G0017332.1 mouse_genomes_project 11 485424 527334 + MGP_WSBEiJ_P0026984 Morc2a protein_coding protein_coding MGP_WSBEiJ_T0026985.1 MGP_WSBEiJ_G0017332.1 mouse_genomes_project 11 485689 505574 + MGP_WSBEiJ_P0026985 Morc2a protein_coding protein_coding MGP_WSBEiJ_T0026986.1 MGP_WSBEiJ_G0017332.1 mouse_genomes_project 11 486183 527440 + MGP_WSBEiJ_P0026986 Morc2a protein_coding protein_coding MGP_WSBEiJ_T0026987.1 MGP_WSBEiJ_G0017332.1 mouse_genomes_project 11 516070 520872 + Morc2a protein_coding processed_transcript MGP_WSBEiJ_T0026988.1 MGP_WSBEiJ_G0017332.1 mouse_genomes_project 11 516430 517316 + Morc2a protein_coding processed_transcript MGP_WSBEiJ_T0026989.1 MGP_WSBEiJ_G0017332.1 mouse_genomes_project 11 516525 520654 + Morc2a protein_coding processed_transcript MGP_WSBEiJ_T0003260.1 MGP_WSBEiJ_G0003013.1 mouse_genomes_project 11 111840175 111842930 - antisense antisense MGP_WSBEiJ_T0031266.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99316479 99324298 + MGP_WSBEiJ_P0031266 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031267.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99316482 99360033 + MGP_WSBEiJ_P0031267 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031268.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99317151 99324787 + Lasp1 protein_coding retained_intron MGP_WSBEiJ_T0031269.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99317317 99354873 + MGP_WSBEiJ_P0031269 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031270.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99317477 99354861 + MGP_WSBEiJ_P0031270 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031271.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99317650 99354829 + MGP_WSBEiJ_P0031271 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031272.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99317776 99345697 + MGP_WSBEiJ_P0031272 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031273.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99317782 99324378 + MGP_WSBEiJ_P0031273 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031274.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99319474 99345699 + MGP_WSBEiJ_P0031274 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031275.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99322652 99357391 + MGP_WSBEiJ_P0031275 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031276.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99323768 99324359 + MGP_WSBEiJ_P0031276 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031277.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99323960 99336622 + MGP_WSBEiJ_P0031277 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031278.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99336087 99345738 + MGP_WSBEiJ_P0031278 Lasp1 protein_coding protein_coding MGP_WSBEiJ_T0031279.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99354452 99357477 + Lasp1 protein_coding retained_intron MGP_WSBEiJ_T0031280.1 MGP_WSBEiJ_G0018401.1 mouse_genomes_project 11 99354685 99355652 + Lasp1 protein_coding retained_intron MGP_WSBEiJ_T0032994.1 MGP_WSBEiJ_G0018805.1 mouse_genomes_project 11 120819819 120822635 + MGP_WSBEiJ_P0032994 Tmc8 protein_coding protein_coding MGP_WSBEiJ_T0032995.1 MGP_WSBEiJ_G0018805.1 mouse_genomes_project 11 120820040 120831553 + MGP_WSBEiJ_P0032995 Tmc8 protein_coding protein_coding MGP_WSBEiJ_T0032996.1 MGP_WSBEiJ_G0018805.1 mouse_genomes_project 11 120820058 120831631 + MGP_WSBEiJ_P0032996 Tmc8 protein_coding protein_coding MGP_WSBEiJ_T0032997.1 MGP_WSBEiJ_G0018805.1 mouse_genomes_project 11 120820128 120831413 + MGP_WSBEiJ_P0032997 Tmc8 protein_coding protein_coding MGP_WSBEiJ_T0032998.1 MGP_WSBEiJ_G0018805.1 mouse_genomes_project 11 120821142 120831608 + MGP_WSBEiJ_P0032998 Tmc8 protein_coding protein_coding MGP_WSBEiJ_T0032999.1 MGP_WSBEiJ_G0018805.1 mouse_genomes_project 11 120829702 120831143 + Tmc8 protein_coding retained_intron MGP_WSBEiJ_T0098957.1 MGP_WSBEiJ_G0037620.1 mouse_genomes_project 11 108731900 108732035 + Gm22711 snoRNA snoRNA MGP_WSBEiJ_T0031854.1 MGP_WSBEiJ_G0018574.1 mouse_genomes_project 11 104079604 104080990 - MGP_WSBEiJ_P0031854 Ppy protein_coding protein_coding MGP_WSBEiJ_T0031855.1 MGP_WSBEiJ_G0018574.1 mouse_genomes_project 11 104079604 104080981 - MGP_WSBEiJ_P0031855 Ppy protein_coding protein_coding MGP_WSBEiJ_T0027028.1 MGP_WSBEiJ_G0017343.1 mouse_genomes_project 11 959675 963639 - MGP_WSBEiJ_P0027028 Mtfp1 protein_coding protein_coding MGP_WSBEiJ_T0027029.1 MGP_WSBEiJ_G0017343.1 mouse_genomes_project 11 962629 963336 - Mtfp1 protein_coding processed_transcript MGP_WSBEiJ_T0009575.1 MGP_WSBEiJ_G0007732.1 mouse_genomes_project 11 80158037 80158149 + Mir365-2 miRNA miRNA MGP_WSBEiJ_T0012371.1 MGP_WSBEiJ_G0010501.1 mouse_genomes_project 11 61282272 61282657 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033210.1 MGP_WSBEiJ_G0018848.1 mouse_genomes_project 11 123402457 123463353 + MGP_WSBEiJ_P0033210 Bahcc1 protein_coding protein_coding MGP_WSBEiJ_T0033211.1 MGP_WSBEiJ_G0018848.1 mouse_genomes_project 11 123402457 123464823 + MGP_WSBEiJ_P0033211 Bahcc1 protein_coding protein_coding MGP_WSBEiJ_T0033212.1 MGP_WSBEiJ_G0018848.1 mouse_genomes_project 11 123405996 123406836 + Bahcc1 protein_coding processed_transcript MGP_WSBEiJ_T0033213.1 MGP_WSBEiJ_G0018848.1 mouse_genomes_project 11 123406250 123463353 + MGP_WSBEiJ_P0033213 Bahcc1 protein_coding protein_coding MGP_WSBEiJ_T0016658.1 MGP_WSBEiJ_G0014624.1 mouse_genomes_project 11 102170173 102171377 - Gm20394 processed_transcript processed_transcript MGP_WSBEiJ_T0030176.1 MGP_WSBEiJ_G0018123.1 mouse_genomes_project 11 78413534 78477168 + MGP_WSBEiJ_P0030176 Fam222b protein_coding protein_coding MGP_WSBEiJ_T0030177.1 MGP_WSBEiJ_G0018123.1 mouse_genomes_project 11 78413582 78476542 + MGP_WSBEiJ_P0030177 Fam222b protein_coding protein_coding MGP_WSBEiJ_T0030178.1 MGP_WSBEiJ_G0018123.1 mouse_genomes_project 11 78435607 78477168 + MGP_WSBEiJ_P0030178 Fam222b protein_coding protein_coding MGP_WSBEiJ_T0006259.1 MGP_WSBEiJ_G0005220.1 mouse_genomes_project 11 115428465 115429522 + 4933434M16Rik lincRNA lincRNA MGP_WSBEiJ_T0006260.1 MGP_WSBEiJ_G0005220.1 mouse_genomes_project 11 115428490 115438496 + 4933434M16Rik lincRNA lincRNA MGP_WSBEiJ_T0028409.1 MGP_WSBEiJ_G0017687.1 mouse_genomes_project 11 53821131 53876297 - MGP_WSBEiJ_P0028409 Anxa6 protein_coding protein_coding MGP_WSBEiJ_T0028410.1 MGP_WSBEiJ_G0017687.1 mouse_genomes_project 11 53821131 53876297 - MGP_WSBEiJ_P0028410 Anxa6 protein_coding protein_coding MGP_WSBEiJ_T0028411.1 MGP_WSBEiJ_G0017687.1 mouse_genomes_project 11 53833197 53876267 - Anxa6 protein_coding processed_transcript MGP_WSBEiJ_T0029108.1 MGP_WSBEiJ_G0017874.1 mouse_genomes_project 11 68662231 68686265 - MGP_WSBEiJ_P0029108 Pfas protein_coding protein_coding MGP_WSBEiJ_T0029109.1 MGP_WSBEiJ_G0017874.1 mouse_genomes_project 11 68662234 68671815 - Pfas protein_coding retained_intron MGP_WSBEiJ_T0029110.1 MGP_WSBEiJ_G0017874.1 mouse_genomes_project 11 68662994 68667080 - Pfas protein_coding retained_intron MGP_WSBEiJ_T0029111.1 MGP_WSBEiJ_G0017874.1 mouse_genomes_project 11 68664436 68668888 - MGP_WSBEiJ_P0029111 Pfas protein_coding protein_coding MGP_WSBEiJ_T0029112.1 MGP_WSBEiJ_G0017874.1 mouse_genomes_project 11 68667194 68669364 - Pfas protein_coding retained_intron MGP_WSBEiJ_T0029113.1 MGP_WSBEiJ_G0017874.1 mouse_genomes_project 11 68670520 68675204 - MGP_WSBEiJ_P0029113 Pfas protein_coding protein_coding MGP_WSBEiJ_T0029114.1 MGP_WSBEiJ_G0017874.1 mouse_genomes_project 11 68674493 68686256 - Pfas protein_coding retained_intron MGP_WSBEiJ_T0003060.1 MGP_WSBEiJ_G0002848.1 mouse_genomes_project 11 21304717 21305646 + Gm12061 antisense antisense MGP_WSBEiJ_T0027507.1 MGP_WSBEiJ_G0017455.1 mouse_genomes_project 11 20647530 20690469 + MGP_WSBEiJ_P0027507 Xpo1 protein_coding protein_coding MGP_WSBEiJ_T0027508.1 MGP_WSBEiJ_G0017455.1 mouse_genomes_project 11 20647530 20690469 + MGP_WSBEiJ_P0027508 Xpo1 protein_coding protein_coding MGP_WSBEiJ_T0027509.1 MGP_WSBEiJ_G0017455.1 mouse_genomes_project 11 20647544 20689105 + MGP_WSBEiJ_P0027509 Xpo1 protein_coding protein_coding MGP_WSBEiJ_T0027510.1 MGP_WSBEiJ_G0017455.1 mouse_genomes_project 11 20647547 20674341 + Xpo1 protein_coding processed_transcript MGP_WSBEiJ_T0027511.1 MGP_WSBEiJ_G0017455.1 mouse_genomes_project 11 20647567 20691122 + MGP_WSBEiJ_P0027511 Xpo1 protein_coding protein_coding MGP_WSBEiJ_T0027512.1 MGP_WSBEiJ_G0017455.1 mouse_genomes_project 11 20648078 20659206 + MGP_WSBEiJ_P0027512 Xpo1 protein_coding protein_coding MGP_WSBEiJ_T0027513.1 MGP_WSBEiJ_G0017455.1 mouse_genomes_project 11 20677524 20680332 + MGP_WSBEiJ_P0027513 Xpo1 protein_coding protein_coding MGP_WSBEiJ_T0029754.1 MGP_WSBEiJ_G0018011.1 mouse_genomes_project 11 73020864 73043205 + Camkk1 protein_coding retained_intron MGP_WSBEiJ_T0029755.1 MGP_WSBEiJ_G0018011.1 mouse_genomes_project 11 73020899 73043217 + MGP_WSBEiJ_P0029755 Camkk1 protein_coding protein_coding MGP_WSBEiJ_T0029756.1 MGP_WSBEiJ_G0018011.1 mouse_genomes_project 11 73028477 73041436 + MGP_WSBEiJ_P0029756 Camkk1 protein_coding protein_coding MGP_WSBEiJ_T0029849.1 MGP_WSBEiJ_G0018057.1 mouse_genomes_project 11 74787445 74838346 - Pafah1b1 protein_coding retained_intron MGP_WSBEiJ_T0029850.1 MGP_WSBEiJ_G0018057.1 mouse_genomes_project 11 74787445 74838687 - MGP_WSBEiJ_P0029850 Pafah1b1 protein_coding protein_coding MGP_WSBEiJ_T0029851.1 MGP_WSBEiJ_G0018057.1 mouse_genomes_project 11 74787446 74838329 - Pafah1b1 protein_coding retained_intron MGP_WSBEiJ_T0029852.1 MGP_WSBEiJ_G0018057.1 mouse_genomes_project 11 74787446 74837869 - MGP_WSBEiJ_P0029852 Pafah1b1 protein_coding protein_coding MGP_WSBEiJ_T0029853.1 MGP_WSBEiJ_G0018057.1 mouse_genomes_project 11 74802112 74837182 - MGP_WSBEiJ_P0029853 Pafah1b1 protein_coding protein_coding MGP_WSBEiJ_T0011108.1 MGP_WSBEiJ_G0009265.1 mouse_genomes_project 11 66929366 66929671 + Gm26476 misc_RNA misc_RNA MGP_WSBEiJ_T0032223.1 MGP_WSBEiJ_G0018649.1 mouse_genomes_project 11 108359362 108363249 - MGP_WSBEiJ_P0032223 Limd2 protein_coding protein_coding MGP_WSBEiJ_T0032224.1 MGP_WSBEiJ_G0018649.1 mouse_genomes_project 11 108361420 108362516 - Limd2 protein_coding processed_transcript MGP_WSBEiJ_T0032225.1 MGP_WSBEiJ_G0018649.1 mouse_genomes_project 11 108361537 108363034 - MGP_WSBEiJ_P0032225 Limd2 protein_coding protein_coding MGP_WSBEiJ_T0032226.1 MGP_WSBEiJ_G0018649.1 mouse_genomes_project 11 108361757 108363967 - MGP_WSBEiJ_P0032226 Limd2 protein_coding protein_coding MGP_WSBEiJ_T0006184.1 MGP_WSBEiJ_G0005166.1 mouse_genomes_project 11 73016491 73020698 - 4732414G09Rik lincRNA lincRNA MGP_WSBEiJ_T0006185.1 MGP_WSBEiJ_G0005166.1 mouse_genomes_project 11 73016491 73020661 - 4732414G09Rik lincRNA lincRNA MGP_WSBEiJ_T0031369.1 MGP_WSBEiJ_G0018425.1 mouse_genomes_project 11 100320869 100334469 + MGP_WSBEiJ_P0031369 Gsdma protein_coding protein_coding MGP_WSBEiJ_T0098898.1 MGP_WSBEiJ_G0037561.1 mouse_genomes_project 11 8536376 8536504 - Gm26458 snoRNA snoRNA MGP_WSBEiJ_T0027439.1 MGP_WSBEiJ_G0017439.1 mouse_genomes_project 11 18109928 18117402 - MGP_WSBEiJ_P0027439 Lgalsl protein_coding protein_coding MGP_WSBEiJ_T0027440.1 MGP_WSBEiJ_G0017439.1 mouse_genomes_project 11 18112705 18117101 - Lgalsl protein_coding processed_transcript MGP_WSBEiJ_T0027441.1 MGP_WSBEiJ_G0017439.1 mouse_genomes_project 11 18115657 18117402 - Lgalsl protein_coding processed_transcript MGP_WSBEiJ_T0027442.1 MGP_WSBEiJ_G0017439.1 mouse_genomes_project 11 18116142 18117368 - Lgalsl protein_coding processed_transcript MGP_WSBEiJ_T0003295.1 MGP_WSBEiJ_G0003039.1 mouse_genomes_project 11 123846130 123848789 + Notumos antisense antisense MGP_WSBEiJ_T0032297.1 MGP_WSBEiJ_G0018667.1 mouse_genomes_project 11 109034811 109047978 - MGP_WSBEiJ_P0032297 Polg2 protein_coding protein_coding MGP_WSBEiJ_T0032298.1 MGP_WSBEiJ_G0018667.1 mouse_genomes_project 11 109034811 109048000 - MGP_WSBEiJ_P0032298 Polg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032299.1 MGP_WSBEiJ_G0018667.1 mouse_genomes_project 11 109035291 109047936 - MGP_WSBEiJ_P0032299 Polg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032300.1 MGP_WSBEiJ_G0018667.1 mouse_genomes_project 11 109037572 109047936 - MGP_WSBEiJ_P0032300 Polg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032301.1 MGP_WSBEiJ_G0018667.1 mouse_genomes_project 11 109040485 109041694 - Polg2 protein_coding retained_intron MGP_WSBEiJ_T0032302.1 MGP_WSBEiJ_G0018667.1 mouse_genomes_project 11 109043357 109047965 - MGP_WSBEiJ_P0032302 Polg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098916.1 MGP_WSBEiJ_G0037579.1 mouse_genomes_project 11 47146807 47146888 + Snord96a snoRNA snoRNA MGP_WSBEiJ_T0033237.1 MGP_WSBEiJ_G0018855.1 mouse_genomes_project 11 123620365 123627688 - Pde6g protein_coding processed_transcript MGP_WSBEiJ_T0033238.1 MGP_WSBEiJ_G0018855.1 mouse_genomes_project 11 123620384 123627706 - Pde6g protein_coding processed_transcript MGP_WSBEiJ_T0033239.1 MGP_WSBEiJ_G0018855.1 mouse_genomes_project 11 123620386 123627754 - MGP_WSBEiJ_P0033239 Pde6g protein_coding protein_coding MGP_WSBEiJ_T0027224.1 MGP_WSBEiJ_G0017387.1 mouse_genomes_project 11 3182687 3201945 - MGP_WSBEiJ_P0027224 Npc1l1 protein_coding protein_coding MGP_WSBEiJ_T0030064.1 MGP_WSBEiJ_G0018103.1 mouse_genomes_project 11 77283212 77318936 - MGP_WSBEiJ_P0030064 Nsrp1 protein_coding protein_coding MGP_WSBEiJ_T0030065.1 MGP_WSBEiJ_G0018103.1 mouse_genomes_project 11 77290373 77318538 - MGP_WSBEiJ_P0030065 Nsrp1 protein_coding protein_coding MGP_WSBEiJ_T0030066.1 MGP_WSBEiJ_G0018103.1 mouse_genomes_project 11 77295360 77318936 - Nsrp1 protein_coding processed_transcript MGP_WSBEiJ_T0028479.1 MGP_WSBEiJ_G0017711.1 mouse_genomes_project 11 57272980 57292262 + MGP_WSBEiJ_P0028479 protein_coding protein_coding MGP_WSBEiJ_T0031039.1 MGP_WSBEiJ_G0018340.1 mouse_genomes_project 11 96728984 96732072 + MGP_WSBEiJ_P0031039 Slc35b1 protein_coding protein_coding MGP_WSBEiJ_T0031040.1 MGP_WSBEiJ_G0018340.1 mouse_genomes_project 11 96729118 96737757 + MGP_WSBEiJ_P0031040 Slc35b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031041.1 MGP_WSBEiJ_G0018340.1 mouse_genomes_project 11 96729129 96737758 + MGP_WSBEiJ_P0031041 Slc35b1 protein_coding protein_coding MGP_WSBEiJ_T0031042.1 MGP_WSBEiJ_G0018340.1 mouse_genomes_project 11 96729133 96730493 + Slc35b1 protein_coding retained_intron MGP_WSBEiJ_T0031043.1 MGP_WSBEiJ_G0018340.1 mouse_genomes_project 11 96735926 96736671 + Slc35b1 protein_coding retained_intron MGP_WSBEiJ_T0033056.1 MGP_WSBEiJ_G0018822.1 mouse_genomes_project 11 121463947 121477658 - MGP_WSBEiJ_P0033056 Cant1 protein_coding protein_coding MGP_WSBEiJ_T0033057.1 MGP_WSBEiJ_G0018822.1 mouse_genomes_project 11 121463947 121477624 - MGP_WSBEiJ_P0033057 Cant1 protein_coding protein_coding MGP_WSBEiJ_T0033058.1 MGP_WSBEiJ_G0018822.1 mouse_genomes_project 11 121463948 121477595 - MGP_WSBEiJ_P0033058 Cant1 protein_coding protein_coding MGP_WSBEiJ_T0033059.1 MGP_WSBEiJ_G0018822.1 mouse_genomes_project 11 121465301 121477624 - MGP_WSBEiJ_P0033059 Cant1 protein_coding protein_coding MGP_WSBEiJ_T0033060.1 MGP_WSBEiJ_G0018822.1 mouse_genomes_project 11 121465301 121473459 - MGP_WSBEiJ_P0033060 Cant1 protein_coding protein_coding MGP_WSBEiJ_T0033061.1 MGP_WSBEiJ_G0018822.1 mouse_genomes_project 11 121465301 121477595 - MGP_WSBEiJ_P0033061 Cant1 protein_coding protein_coding MGP_WSBEiJ_T0012279.1 MGP_WSBEiJ_G0010409.1 mouse_genomes_project 11 25417048 25417402 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032220.1 MGP_WSBEiJ_G0018648.1 mouse_genomes_project 11 108285880 108358556 + MGP_WSBEiJ_P0032220 Map3k3 protein_coding protein_coding MGP_WSBEiJ_T0032221.1 MGP_WSBEiJ_G0018648.1 mouse_genomes_project 11 108354337 108355504 + Map3k3 protein_coding processed_transcript MGP_WSBEiJ_T0032222.1 MGP_WSBEiJ_G0018648.1 mouse_genomes_project 11 108355189 108357250 + Map3k3 protein_coding processed_transcript MGP_WSBEiJ_T0006097.1 MGP_WSBEiJ_G0005092.1 mouse_genomes_project 11 20089246 20096755 - lincRNA lincRNA MGP_WSBEiJ_T0027302.1 MGP_WSBEiJ_G0017407.1 mouse_genomes_project 11 6055820 6077119 - MGP_WSBEiJ_P0027302 Hus1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027303.1 MGP_WSBEiJ_G0017407.1 mouse_genomes_project 11 6055820 6077150 - MGP_WSBEiJ_P0027303 Hus1 protein_coding protein_coding MGP_WSBEiJ_T0027304.1 MGP_WSBEiJ_G0017407.1 mouse_genomes_project 11 6058039 6077087 - Hus1 protein_coding retained_intron MGP_WSBEiJ_T0027305.1 MGP_WSBEiJ_G0017407.1 mouse_genomes_project 11 6060023 6077123 - Hus1 protein_coding retained_intron MGP_WSBEiJ_T0027306.1 MGP_WSBEiJ_G0017407.1 mouse_genomes_project 11 6062546 6076637 - Hus1 protein_coding retained_intron MGP_WSBEiJ_T0027307.1 MGP_WSBEiJ_G0017407.1 mouse_genomes_project 11 6071932 6077087 - Hus1 protein_coding processed_transcript MGP_WSBEiJ_T0016553.1 MGP_WSBEiJ_G0014567.1 mouse_genomes_project 11 475603 483453 - Tug1 processed_transcript antisense MGP_WSBEiJ_T0016554.1 MGP_WSBEiJ_G0014567.1 mouse_genomes_project 11 482774 484973 - Tug1 processed_transcript antisense MGP_WSBEiJ_T0016555.1 MGP_WSBEiJ_G0014567.1 mouse_genomes_project 11 483992 485604 - Tug1 processed_transcript TEC MGP_WSBEiJ_T0031004.1 MGP_WSBEiJ_G0018332.1 mouse_genomes_project 11 96333904 96349699 + MGP_WSBEiJ_P0031004 Samd14 protein_coding protein_coding MGP_WSBEiJ_T0031005.1 MGP_WSBEiJ_G0018332.1 mouse_genomes_project 11 96333907 96345260 + Samd14 protein_coding processed_transcript MGP_WSBEiJ_T0031006.1 MGP_WSBEiJ_G0018332.1 mouse_genomes_project 11 96334172 96343743 + MGP_WSBEiJ_P0031006 Samd14 protein_coding protein_coding MGP_WSBEiJ_T0031324.1 MGP_WSBEiJ_G0018412.1 mouse_genomes_project 11 99896463 99900699 - MGP_WSBEiJ_P0031324 Neurod2 protein_coding protein_coding MGP_WSBEiJ_T0009588.1 MGP_WSBEiJ_G0007745.1 mouse_genomes_project 11 98532570 98532677 + Mir8103 miRNA miRNA MGP_WSBEiJ_T0032893.1 MGP_WSBEiJ_G0018787.1 mouse_genomes_project 11 119454690 119460965 - Ube2o protein_coding processed_transcript MGP_WSBEiJ_T0032894.1 MGP_WSBEiJ_G0018787.1 mouse_genomes_project 11 119454690 119497115 - MGP_WSBEiJ_P0032894 Ube2o protein_coding protein_coding MGP_WSBEiJ_T0032895.1 MGP_WSBEiJ_G0018787.1 mouse_genomes_project 11 119462651 119465762 - Ube2o protein_coding processed_transcript MGP_WSBEiJ_T0029048.1 MGP_WSBEiJ_G0017861.1 mouse_genomes_project 11 67814528 68017815 - MGP_WSBEiJ_P0029048 Ntn1 protein_coding protein_coding MGP_WSBEiJ_T0029049.1 MGP_WSBEiJ_G0017861.1 mouse_genomes_project 11 67814530 68004460 - MGP_WSBEiJ_P0029049 Ntn1 protein_coding protein_coding MGP_WSBEiJ_T0029050.1 MGP_WSBEiJ_G0017861.1 mouse_genomes_project 11 68003277 68004644 - MGP_WSBEiJ_P0029050 Ntn1 protein_coding protein_coding MGP_WSBEiJ_T0009590.1 MGP_WSBEiJ_G0007747.1 mouse_genomes_project 11 99167464 99167535 - Gm24158 miRNA miRNA MGP_WSBEiJ_T0003289.1 MGP_WSBEiJ_G0003037.1 mouse_genomes_project 11 123705322 123708986 - Gm11789 antisense antisense MGP_WSBEiJ_T0003290.1 MGP_WSBEiJ_G0003037.1 mouse_genomes_project 11 123705348 123709920 - Gm11789 antisense antisense MGP_WSBEiJ_T0003291.1 MGP_WSBEiJ_G0003037.1 mouse_genomes_project 11 123705374 123710216 - Gm11789 antisense antisense MGP_WSBEiJ_T0003292.1 MGP_WSBEiJ_G0003037.1 mouse_genomes_project 11 123706695 123709945 - Gm11789 antisense antisense MGP_WSBEiJ_T0003293.1 MGP_WSBEiJ_G0003037.1 mouse_genomes_project 11 123708640 123709929 - Gm11789 antisense antisense MGP_WSBEiJ_T0012240.1 MGP_WSBEiJ_G0010370.1 mouse_genomes_project 11 14194941 14199170 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027804.1 MGP_WSBEiJ_G0017527.1 mouse_genomes_project 11 33933666 35214484 - MGP_WSBEiJ_P0027804 Tenm2 protein_coding protein_coding MGP_WSBEiJ_T0027805.1 MGP_WSBEiJ_G0017527.1 mouse_genomes_project 11 33934665 34912374 - MGP_WSBEiJ_P0027805 Tenm2 protein_coding protein_coding MGP_WSBEiJ_T0027806.1 MGP_WSBEiJ_G0017527.1 mouse_genomes_project 11 33935038 34912374 - MGP_WSBEiJ_P0027806 Tenm2 protein_coding protein_coding MGP_WSBEiJ_T0027807.1 MGP_WSBEiJ_G0017527.1 mouse_genomes_project 11 34077199 34912374 - Tenm2 protein_coding processed_transcript MGP_WSBEiJ_T0027808.1 MGP_WSBEiJ_G0017527.1 mouse_genomes_project 11 34078471 34627118 - Tenm2 protein_coding processed_transcript MGP_WSBEiJ_T0027809.1 MGP_WSBEiJ_G0017527.1 mouse_genomes_project 11 34102365 34437435 - Tenm2 protein_coding processed_transcript MGP_WSBEiJ_T0027810.1 MGP_WSBEiJ_G0017527.1 mouse_genomes_project 11 34324517 34373004 - Tenm2 protein_coding processed_transcript MGP_WSBEiJ_T0027811.1 MGP_WSBEiJ_G0017527.1 mouse_genomes_project 11 34912412 35214566 - Tenm2 protein_coding processed_transcript MGP_WSBEiJ_T0009563.1 MGP_WSBEiJ_G0007720.1 mouse_genomes_project 11 75305513 75305604 + Mir212 miRNA miRNA MGP_WSBEiJ_T0100484.1 MGP_WSBEiJ_G0038943.1 mouse_genomes_project 11 76349278 76349740 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0003263.1 MGP_WSBEiJ_G0003016.1 mouse_genomes_project 11 112366307 112368127 + Gm11697 antisense antisense MGP_WSBEiJ_T0028355.1 MGP_WSBEiJ_G0017677.1 mouse_genomes_project 11 53068491 53070466 - MGP_WSBEiJ_P0028355 Il3 protein_coding protein_coding MGP_WSBEiJ_T0028135.1 MGP_WSBEiJ_G0017621.1 mouse_genomes_project 11 49421794 49437573 - MGP_WSBEiJ_P0028135 Zfp454 protein_coding protein_coding MGP_WSBEiJ_T0028136.1 MGP_WSBEiJ_G0017621.1 mouse_genomes_project 11 49423232 49437712 - Zfp454 protein_coding processed_transcript MGP_WSBEiJ_T0028137.1 MGP_WSBEiJ_G0017621.1 mouse_genomes_project 11 49427968 49437712 - MGP_WSBEiJ_P0028137 Zfp454 protein_coding protein_coding MGP_WSBEiJ_T0028138.1 MGP_WSBEiJ_G0017621.1 mouse_genomes_project 11 49428180 49437591 - Zfp454 protein_coding processed_transcript MGP_WSBEiJ_T0097714.1 MGP_WSBEiJ_G0036377.1 mouse_genomes_project 11 80057710 80057813 - Gm25867 snRNA snRNA MGP_WSBEiJ_T0098955.1 MGP_WSBEiJ_G0037618.1 mouse_genomes_project 11 106372910 106373043 - Gm22743 snoRNA snoRNA MGP_WSBEiJ_T0009502.1 MGP_WSBEiJ_G0007659.1 mouse_genomes_project 11 1805465 1805523 + Mir6918 miRNA miRNA MGP_WSBEiJ_T0028213.1 MGP_WSBEiJ_G0017642.1 mouse_genomes_project 11 50630277 50644849 - MGP_WSBEiJ_P0028213 Ube2b protein_coding protein_coding MGP_WSBEiJ_T0028214.1 MGP_WSBEiJ_G0017642.1 mouse_genomes_project 11 50631447 50645127 - MGP_WSBEiJ_P0028214 Ube2b protein_coding protein_coding MGP_WSBEiJ_T0028215.1 MGP_WSBEiJ_G0017642.1 mouse_genomes_project 11 50641927 50644844 - Ube2b protein_coding processed_transcript MGP_WSBEiJ_T0028216.1 MGP_WSBEiJ_G0017642.1 mouse_genomes_project 11 50642003 50645127 - Ube2b protein_coding processed_transcript MGP_WSBEiJ_T0028531.1 MGP_WSBEiJ_G0017740.1 mouse_genomes_project 11 57993574 58011136 + MGP_WSBEiJ_P0028531 2810021J22Rik protein_coding protein_coding MGP_WSBEiJ_T0028532.1 MGP_WSBEiJ_G0017740.1 mouse_genomes_project 11 57993625 58005854 + MGP_WSBEiJ_P0028532 2810021J22Rik protein_coding protein_coding MGP_WSBEiJ_T0012502.1 MGP_WSBEiJ_G0010632.1 mouse_genomes_project 11 118513879 118513948 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029091.1 MGP_WSBEiJ_G0017871.1 mouse_genomes_project 11 68611012 68623728 - MGP_WSBEiJ_P0029091 Arhgef15 protein_coding protein_coding MGP_WSBEiJ_T0029092.1 MGP_WSBEiJ_G0017871.1 mouse_genomes_project 11 68611014 68627886 - MGP_WSBEiJ_P0029092 Arhgef15 protein_coding protein_coding MGP_WSBEiJ_T0029093.1 MGP_WSBEiJ_G0017871.1 mouse_genomes_project 11 68612386 68615240 - Arhgef15 protein_coding processed_transcript MGP_WSBEiJ_T0029094.1 MGP_WSBEiJ_G0017871.1 mouse_genomes_project 11 68614160 68615609 - Arhgef15 protein_coding processed_transcript MGP_WSBEiJ_T0029095.1 MGP_WSBEiJ_G0017871.1 mouse_genomes_project 11 68614306 68615449 - Arhgef15 protein_coding processed_transcript MGP_WSBEiJ_T0029096.1 MGP_WSBEiJ_G0017871.1 mouse_genomes_project 11 68616023 68619966 - Arhgef15 protein_coding retained_intron MGP_WSBEiJ_T0003262.1 MGP_WSBEiJ_G0003015.1 mouse_genomes_project 11 112219143 112224733 + Gm11683 antisense antisense MGP_WSBEiJ_T0029570.1 MGP_WSBEiJ_G0017973.1 mouse_genomes_project 11 70492747 70498394 - MGP_WSBEiJ_P0029570 Spag7 protein_coding protein_coding MGP_WSBEiJ_T0029571.1 MGP_WSBEiJ_G0017973.1 mouse_genomes_project 11 70492981 70498196 - Spag7 protein_coding retained_intron MGP_WSBEiJ_T0029572.1 MGP_WSBEiJ_G0017973.1 mouse_genomes_project 11 70493318 70498257 - Spag7 protein_coding retained_intron MGP_WSBEiJ_T0029573.1 MGP_WSBEiJ_G0017973.1 mouse_genomes_project 11 70493377 70498268 - MGP_WSBEiJ_P0029573 Spag7 protein_coding protein_coding MGP_WSBEiJ_T0031325.1 MGP_WSBEiJ_G0018413.1 mouse_genomes_project 11 99926232 99937994 + MGP_WSBEiJ_P0031325 Ppp1r1b protein_coding protein_coding MGP_WSBEiJ_T0031326.1 MGP_WSBEiJ_G0018413.1 mouse_genomes_project 11 99927993 99937979 + Ppp1r1b protein_coding retained_intron MGP_WSBEiJ_T0031327.1 MGP_WSBEiJ_G0018413.1 mouse_genomes_project 11 99928353 99937582 + Ppp1r1b protein_coding retained_intron MGP_WSBEiJ_T0031328.1 MGP_WSBEiJ_G0018413.1 mouse_genomes_project 11 99928627 99937477 + Ppp1r1b protein_coding processed_transcript MGP_WSBEiJ_T0031329.1 MGP_WSBEiJ_G0018413.1 mouse_genomes_project 11 99931734 99937294 + Ppp1r1b protein_coding processed_transcript MGP_WSBEiJ_T0028274.1 MGP_WSBEiJ_G0017656.1 mouse_genomes_project 11 52183131 52185409 - MGP_WSBEiJ_P0028274 Gm10447 protein_coding protein_coding MGP_WSBEiJ_T0006163.1 MGP_WSBEiJ_G0005150.1 mouse_genomes_project 11 62832213 62836933 + B130011K05Rik lincRNA lincRNA MGP_WSBEiJ_T0006204.1 MGP_WSBEiJ_G0005179.1 mouse_genomes_project 11 84506563 84540076 - Gm12576 lincRNA lincRNA MGP_WSBEiJ_T0100498.1 MGP_WSBEiJ_G0038957.1 mouse_genomes_project 11 101682314 101682517 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0031425.1 MGP_WSBEiJ_G0018437.1 mouse_genomes_project 11 100677117 100677954 - MGP_WSBEiJ_P0031425 Gjd3 protein_coding protein_coding MGP_WSBEiJ_T0032734.1 MGP_WSBEiJ_G0018759.1 mouse_genomes_project 11 118725969 118765615 + MGP_WSBEiJ_P0032734 Myo15b protein_coding protein_coding MGP_WSBEiJ_T0032735.1 MGP_WSBEiJ_G0018759.1 mouse_genomes_project 11 118745122 118747761 + Myo15b protein_coding processed_transcript MGP_WSBEiJ_T0032736.1 MGP_WSBEiJ_G0018759.1 mouse_genomes_project 11 118745140 118750152 + MGP_WSBEiJ_P0032736 Myo15b protein_coding protein_coding MGP_WSBEiJ_T0032737.1 MGP_WSBEiJ_G0018759.1 mouse_genomes_project 11 118748030 118760511 + MGP_WSBEiJ_P0032737 Myo15b protein_coding protein_coding MGP_WSBEiJ_T0032738.1 MGP_WSBEiJ_G0018759.1 mouse_genomes_project 11 118759503 118760512 + MGP_WSBEiJ_P0032738 Myo15b protein_coding protein_coding MGP_WSBEiJ_T0032739.1 MGP_WSBEiJ_G0018759.1 mouse_genomes_project 11 118759872 118765611 + Myo15b protein_coding retained_intron MGP_WSBEiJ_T0032740.1 MGP_WSBEiJ_G0018759.1 mouse_genomes_project 11 118760666 118765626 + MGP_WSBEiJ_P0032740 Myo15b protein_coding protein_coding MGP_WSBEiJ_T0032741.1 MGP_WSBEiJ_G0018759.1 mouse_genomes_project 11 118763261 118764192 + Myo15b protein_coding retained_intron MGP_WSBEiJ_T0097276.1 MGP_WSBEiJ_G0035954.1 mouse_genomes_project 11 122277595 122278159 - Gm11753 sense_intronic sense_intronic MGP_WSBEiJ_T0012469.1 MGP_WSBEiJ_G0010599.1 mouse_genomes_project 11 104507586 104507757 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031219.1 MGP_WSBEiJ_G0018387.1 mouse_genomes_project 11 98815927 98835658 - MGP_WSBEiJ_P0031219 Gpr179 protein_coding protein_coding MGP_WSBEiJ_T0031220.1 MGP_WSBEiJ_G0018387.1 mouse_genomes_project 11 98833055 98835719 - Gpr179 protein_coding retained_intron MGP_WSBEiJ_T0003184.1 MGP_WSBEiJ_G0002953.1 mouse_genomes_project 11 89840934 89873362 + 4930556N13Rik antisense antisense MGP_WSBEiJ_T0012267.1 MGP_WSBEiJ_G0010397.1 mouse_genomes_project 11 20122195 20123622 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009540.1 MGP_WSBEiJ_G0007697.1 mouse_genomes_project 11 59977784 59977848 + Mir5100 miRNA miRNA MGP_WSBEiJ_T0030618.1 MGP_WSBEiJ_G0018239.1 mouse_genomes_project 11 85926275 85936761 + MGP_WSBEiJ_P0030618 protein_coding protein_coding MGP_WSBEiJ_T0031236.1 MGP_WSBEiJ_G0018392.1 mouse_genomes_project 11 99134493 99136807 - MGP_WSBEiJ_P0031236 E130012A19Rik protein_coding protein_coding MGP_WSBEiJ_T0003177.1 MGP_WSBEiJ_G0002948.1 mouse_genomes_project 11 87018197 87027969 + Brip1os antisense antisense MGP_WSBEiJ_T0003178.1 MGP_WSBEiJ_G0002948.1 mouse_genomes_project 11 87018210 87125904 + Brip1os antisense antisense MGP_WSBEiJ_T0027462.1 MGP_WSBEiJ_G0017444.1 mouse_genomes_project 11 18890944 18985898 + MGP_WSBEiJ_P0027462 Wdpcp protein_coding protein_coding MGP_WSBEiJ_T0027463.1 MGP_WSBEiJ_G0017444.1 mouse_genomes_project 11 18890944 19228553 + MGP_WSBEiJ_P0027463 Wdpcp protein_coding protein_coding MGP_WSBEiJ_T0027464.1 MGP_WSBEiJ_G0017444.1 mouse_genomes_project 11 18891014 19022795 + Wdpcp protein_coding processed_transcript MGP_WSBEiJ_T0027465.1 MGP_WSBEiJ_G0017444.1 mouse_genomes_project 11 19014808 19037981 + Wdpcp protein_coding processed_transcript MGP_WSBEiJ_T0027466.1 MGP_WSBEiJ_G0017444.1 mouse_genomes_project 11 19020355 19074669 + Wdpcp protein_coding processed_transcript MGP_WSBEiJ_T0027467.1 MGP_WSBEiJ_G0017444.1 mouse_genomes_project 11 19139187 19143763 + Wdpcp protein_coding processed_transcript MGP_WSBEiJ_T0012343.1 MGP_WSBEiJ_G0010473.1 mouse_genomes_project 11 52677372 52677771 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097707.1 MGP_WSBEiJ_G0036370.1 mouse_genomes_project 11 72878972 72879134 + Gm26121 snRNA snRNA MGP_WSBEiJ_T0012320.1 MGP_WSBEiJ_G0010450.1 mouse_genomes_project 11 41825753 41826437 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030934.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030934 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030935.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030935 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030936.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030936 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030937.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030937 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030938.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030938 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030939.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030939 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030940.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030940 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030941.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030941 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030942.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628799 95699712 - MGP_WSBEiJ_P0030942 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030943.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95628814 95699784 - MGP_WSBEiJ_P0030943 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030944.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95629044 95699712 - MGP_WSBEiJ_P0030944 Cacna1g protein_coding protein_coding MGP_WSBEiJ_T0030945.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95630261 95632098 - Cacna1g protein_coding processed_transcript MGP_WSBEiJ_T0030946.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95631902 95637608 - Cacna1g protein_coding processed_transcript MGP_WSBEiJ_T0030947.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95639237 95644777 - Cacna1g protein_coding processed_transcript MGP_WSBEiJ_T0030948.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95645650 95646873 - Cacna1g protein_coding processed_transcript MGP_WSBEiJ_T0030949.1 MGP_WSBEiJ_G0018315.1 mouse_genomes_project 11 95647362 95699253 - Cacna1g protein_coding processed_transcript MGP_WSBEiJ_T0027782.1 MGP_WSBEiJ_G0017520.1 mouse_genomes_project 11 32184991 32295928 + MGP_WSBEiJ_P0027782 Fam196b protein_coding protein_coding MGP_WSBEiJ_T0027783.1 MGP_WSBEiJ_G0017520.1 mouse_genomes_project 11 32184991 32295927 + MGP_WSBEiJ_P0027783 Fam196b protein_coding protein_coding MGP_WSBEiJ_T0028708.1 MGP_WSBEiJ_G0017786.1 mouse_genomes_project 11 59988927 60028020 - MGP_WSBEiJ_P0028708 Top3a protein_coding protein_coding MGP_WSBEiJ_T0028709.1 MGP_WSBEiJ_G0017786.1 mouse_genomes_project 11 59988928 60027942 - MGP_WSBEiJ_P0028709 Top3a protein_coding protein_coding MGP_WSBEiJ_T0028710.1 MGP_WSBEiJ_G0017786.1 mouse_genomes_project 11 59990756 60027920 - MGP_WSBEiJ_P0028710 Top3a protein_coding protein_coding MGP_WSBEiJ_T0028711.1 MGP_WSBEiJ_G0017786.1 mouse_genomes_project 11 59991099 60027919 - MGP_WSBEiJ_P0028711 Top3a protein_coding protein_coding MGP_WSBEiJ_T0028712.1 MGP_WSBEiJ_G0017786.1 mouse_genomes_project 11 59998319 60001541 - Top3a protein_coding retained_intron MGP_WSBEiJ_T0028713.1 MGP_WSBEiJ_G0017786.1 mouse_genomes_project 11 60011111 60027954 - MGP_WSBEiJ_P0028713 Top3a protein_coding protein_coding MGP_WSBEiJ_T0031237.1 MGP_WSBEiJ_G0018393.1 mouse_genomes_project 11 99160859 99197884 + MGP_WSBEiJ_P0031237 Mllt6 protein_coding protein_coding MGP_WSBEiJ_T0031238.1 MGP_WSBEiJ_G0018393.1 mouse_genomes_project 11 99174281 99194958 + Mllt6 protein_coding processed_transcript MGP_WSBEiJ_T0031239.1 MGP_WSBEiJ_G0018393.1 mouse_genomes_project 11 99174327 99182874 + Mllt6 protein_coding processed_transcript MGP_WSBEiJ_T0031240.1 MGP_WSBEiJ_G0018393.1 mouse_genomes_project 11 99185377 99187693 + Mllt6 protein_coding processed_transcript MGP_WSBEiJ_T0031241.1 MGP_WSBEiJ_G0018393.1 mouse_genomes_project 11 99185377 99187693 + Mllt6 protein_coding processed_transcript MGP_WSBEiJ_T0032550.1 MGP_WSBEiJ_G0018724.1 mouse_genomes_project 11 117777789 117780519 - MGP_WSBEiJ_P0032550 protein_coding protein_coding MGP_WSBEiJ_T0097686.1 MGP_WSBEiJ_G0036349.1 mouse_genomes_project 11 32780357 32780464 + Gm25799 snRNA snRNA MGP_WSBEiJ_T0027202.1 MGP_WSBEiJ_G0017383.1 mouse_genomes_project 11 2924651 2936749 + MGP_WSBEiJ_P0027202 Ykt6 protein_coding protein_coding MGP_WSBEiJ_T0027203.1 MGP_WSBEiJ_G0017383.1 mouse_genomes_project 11 2928262 2932170 + Ykt6 protein_coding processed_transcript MGP_WSBEiJ_T0016588.1 MGP_WSBEiJ_G0014585.1 mouse_genomes_project 11 49134677 49137821 - Gm12198 processed_transcript processed_transcript MGP_WSBEiJ_T0028037.1 MGP_WSBEiJ_G0017598.1 mouse_genomes_project 11 47975916 48006897 + MGP_WSBEiJ_P0028037 Olfr1384 protein_coding protein_coding MGP_WSBEiJ_T0028412.1 MGP_WSBEiJ_G0017688.1 mouse_genomes_project 11 53895307 53924748 - MGP_WSBEiJ_P0028412 Ccdc69 protein_coding protein_coding MGP_WSBEiJ_T0028413.1 MGP_WSBEiJ_G0017688.1 mouse_genomes_project 11 53896307 53924772 - MGP_WSBEiJ_P0028413 Ccdc69 protein_coding protein_coding MGP_WSBEiJ_T0012314.1 MGP_WSBEiJ_G0010444.1 mouse_genomes_project 11 38700504 38700850 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029513.1 MGP_WSBEiJ_G0017964.1 mouse_genomes_project 11 70359130 70360250 + MGP_WSBEiJ_P0029513 Pld2 protein_coding protein_coding MGP_WSBEiJ_T0029514.1 MGP_WSBEiJ_G0017964.1 mouse_genomes_project 11 70359372 70378702 + MGP_WSBEiJ_P0029514 Pld2 protein_coding protein_coding MGP_WSBEiJ_T0029515.1 MGP_WSBEiJ_G0017964.1 mouse_genomes_project 11 70359409 70378702 + MGP_WSBEiJ_P0029515 Pld2 protein_coding protein_coding MGP_WSBEiJ_T0029516.1 MGP_WSBEiJ_G0017964.1 mouse_genomes_project 11 70359422 70366509 + MGP_WSBEiJ_P0029516 Pld2 protein_coding protein_coding MGP_WSBEiJ_T0029517.1 MGP_WSBEiJ_G0017964.1 mouse_genomes_project 11 70374130 70377695 + Pld2 protein_coding retained_intron MGP_WSBEiJ_T0029518.1 MGP_WSBEiJ_G0017964.1 mouse_genomes_project 11 70376233 70377819 + MGP_WSBEiJ_P0029518 Pld2 protein_coding protein_coding MGP_WSBEiJ_T0029519.1 MGP_WSBEiJ_G0017964.1 mouse_genomes_project 11 70376398 70378069 + Pld2 protein_coding retained_intron MGP_WSBEiJ_T0009594.1 MGP_WSBEiJ_G0007751.1 mouse_genomes_project 11 99577469 99577549 + Gm27597 miRNA miRNA MGP_WSBEiJ_T0006216.1 MGP_WSBEiJ_G0005187.1 mouse_genomes_project 11 89200625 89204241 + Gm44783 lincRNA lincRNA MGP_WSBEiJ_T0029921.1 MGP_WSBEiJ_G0018072.1 mouse_genomes_project 11 75591138 75605142 - MGP_WSBEiJ_P0029921 Wdr81 protein_coding protein_coding MGP_WSBEiJ_T0029922.1 MGP_WSBEiJ_G0018072.1 mouse_genomes_project 11 75591142 75601786 - MGP_WSBEiJ_P0029922 Wdr81 protein_coding protein_coding MGP_WSBEiJ_T0029923.1 MGP_WSBEiJ_G0018072.1 mouse_genomes_project 11 75598348 75599963 - Wdr81 protein_coding processed_transcript MGP_WSBEiJ_T0027629.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27361142 27413733 + MGP_WSBEiJ_P0027629 Rtn4 protein_coding protein_coding MGP_WSBEiJ_T0027630.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27361142 27415140 + MGP_WSBEiJ_P0027630 Rtn4 protein_coding protein_coding MGP_WSBEiJ_T0027631.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27361142 27413733 + MGP_WSBEiJ_P0027631 Rtn4 protein_coding protein_coding MGP_WSBEiJ_T0027632.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27361143 27412906 + MGP_WSBEiJ_P0027632 Rtn4 protein_coding protein_coding MGP_WSBEiJ_T0027633.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27361969 27413733 + MGP_WSBEiJ_P0027633 Rtn4 protein_coding protein_coding MGP_WSBEiJ_T0027634.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27388624 27413733 + MGP_WSBEiJ_P0027634 Rtn4 protein_coding protein_coding MGP_WSBEiJ_T0027635.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27403737 27413234 + Rtn4 protein_coding processed_transcript MGP_WSBEiJ_T0027636.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27403812 27413146 + Rtn4 protein_coding processed_transcript MGP_WSBEiJ_T0027637.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27406432 27413146 + Rtn4 protein_coding processed_transcript MGP_WSBEiJ_T0027638.1 MGP_WSBEiJ_G0017480.1 mouse_genomes_project 11 27411790 27413084 + Rtn4 protein_coding processed_transcript MGP_WSBEiJ_T0028266.1 MGP_WSBEiJ_G0017653.1 mouse_genomes_project 11 52150195 52151185 - MGP_WSBEiJ_P0028266 Leap2 protein_coding protein_coding MGP_WSBEiJ_T0026947.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 151538 181324 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0026948.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 151538 220121 - MGP_WSBEiJ_P0026948 Limk2 protein_coding protein_coding MGP_WSBEiJ_T0026949.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 151538 181324 - MGP_WSBEiJ_P0026949 Limk2 protein_coding protein_coding MGP_WSBEiJ_T0026950.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 153022 180969 - MGP_WSBEiJ_P0026950 Limk2 protein_coding protein_coding MGP_WSBEiJ_T0026951.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 159393 161796 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0026952.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 161748 164847 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0026953.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 162386 165182 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0026954.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 164846 220121 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0026955.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 165163 165692 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0026956.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 167161 179112 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0026957.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 169443 181283 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0026958.1 MGP_WSBEiJ_G0017326.1 mouse_genomes_project 11 206762 220136 - Limk2 protein_coding processed_transcript MGP_WSBEiJ_T0027765.1 MGP_WSBEiJ_G0017514.1 mouse_genomes_project 11 31425175 31453068 + MGP_WSBEiJ_P0027765 D130052B06Rik protein_coding protein_coding MGP_WSBEiJ_T0032556.1 MGP_WSBEiJ_G0018728.1 mouse_genomes_project 11 117916947 117937180 - MGP_WSBEiJ_P0032556 Cd300lf protein_coding protein_coding MGP_WSBEiJ_T0032557.1 MGP_WSBEiJ_G0018728.1 mouse_genomes_project 11 117916947 117937180 - MGP_WSBEiJ_P0032557 Cd300lf protein_coding protein_coding MGP_WSBEiJ_T0032558.1 MGP_WSBEiJ_G0018728.1 mouse_genomes_project 11 117916947 117937180 - MGP_WSBEiJ_P0032558 Cd300lf protein_coding protein_coding MGP_WSBEiJ_T0032559.1 MGP_WSBEiJ_G0018728.1 mouse_genomes_project 11 117917711 117937069 - MGP_WSBEiJ_P0032559 Cd300lf protein_coding unknown_likely_coding MGP_WSBEiJ_T0032560.1 MGP_WSBEiJ_G0018728.1 mouse_genomes_project 11 117919589 117937179 - Cd300lf protein_coding processed_transcript MGP_WSBEiJ_T0032561.1 MGP_WSBEiJ_G0018728.1 mouse_genomes_project 11 117921002 117928934 - Cd300lf protein_coding processed_transcript MGP_WSBEiJ_T0032562.1 MGP_WSBEiJ_G0018728.1 mouse_genomes_project 11 117921086 117928881 - Cd300lf protein_coding processed_transcript MGP_WSBEiJ_T0032563.1 MGP_WSBEiJ_G0018728.1 mouse_genomes_project 11 117921098 117928875 - Cd300lf protein_coding processed_transcript MGP_WSBEiJ_T0028000.1 MGP_WSBEiJ_G0017588.1 mouse_genomes_project 11 47601736 47623817 - MGP_WSBEiJ_P0028000 Btnl9 protein_coding protein_coding MGP_WSBEiJ_T0028001.1 MGP_WSBEiJ_G0017588.1 mouse_genomes_project 11 47605176 47623703 - MGP_WSBEiJ_P0028001 Btnl9 protein_coding protein_coding MGP_WSBEiJ_T0028002.1 MGP_WSBEiJ_G0017588.1 mouse_genomes_project 11 47605444 47606800 - Btnl9 protein_coding retained_intron MGP_WSBEiJ_T0028003.1 MGP_WSBEiJ_G0017588.1 mouse_genomes_project 11 47611502 47623695 - MGP_WSBEiJ_P0028003 Btnl9 protein_coding protein_coding MGP_WSBEiJ_T0028004.1 MGP_WSBEiJ_G0017588.1 mouse_genomes_project 11 47618936 47623725 - Btnl9 protein_coding processed_transcript MGP_WSBEiJ_T0027795.1 MGP_WSBEiJ_G0017524.1 mouse_genomes_project 11 33713039 33714542 - MGP_WSBEiJ_P0027795 Fbll1 protein_coding protein_coding MGP_WSBEiJ_T0009597.1 MGP_WSBEiJ_G0007754.1 mouse_genomes_project 11 102266760 102266841 - Gm27374 miRNA miRNA MGP_WSBEiJ_T0029917.1 MGP_WSBEiJ_G0018071.1 mouse_genomes_project 11 75579611 75586682 - MGP_WSBEiJ_P0029917 Serpinf2 protein_coding protein_coding MGP_WSBEiJ_T0029918.1 MGP_WSBEiJ_G0018071.1 mouse_genomes_project 11 75579615 75587283 - MGP_WSBEiJ_P0029918 Serpinf2 protein_coding protein_coding MGP_WSBEiJ_T0029919.1 MGP_WSBEiJ_G0018071.1 mouse_genomes_project 11 75583784 75587373 - MGP_WSBEiJ_P0029919 Serpinf2 protein_coding protein_coding MGP_WSBEiJ_T0029920.1 MGP_WSBEiJ_G0018071.1 mouse_genomes_project 11 75584303 75587360 - MGP_WSBEiJ_P0029920 Serpinf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029222.1 MGP_WSBEiJ_G0017900.1 mouse_genomes_project 11 69330182 69344416 + MGP_WSBEiJ_P0029222 Trp53 protein_coding protein_coding MGP_WSBEiJ_T0029223.1 MGP_WSBEiJ_G0017900.1 mouse_genomes_project 11 69330182 69344415 + MGP_WSBEiJ_P0029223 Trp53 protein_coding protein_coding MGP_WSBEiJ_T0029224.1 MGP_WSBEiJ_G0017900.1 mouse_genomes_project 11 69330182 69344415 + MGP_WSBEiJ_P0029224 Trp53 protein_coding protein_coding MGP_WSBEiJ_T0029225.1 MGP_WSBEiJ_G0017900.1 mouse_genomes_project 11 69330225 69341438 + Trp53 protein_coding processed_transcript MGP_WSBEiJ_T0029226.1 MGP_WSBEiJ_G0017900.1 mouse_genomes_project 11 69330228 69344416 + MGP_WSBEiJ_P0029226 Trp53 protein_coding protein_coding MGP_WSBEiJ_T0029227.1 MGP_WSBEiJ_G0017900.1 mouse_genomes_project 11 69330839 69343851 + MGP_WSBEiJ_P0029227 Trp53 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029228.1 MGP_WSBEiJ_G0017900.1 mouse_genomes_project 11 69330839 69344422 + MGP_WSBEiJ_P0029228 Trp53 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029229.1 MGP_WSBEiJ_G0017900.1 mouse_genomes_project 11 69339627 69340754 + Trp53 protein_coding processed_transcript MGP_WSBEiJ_T0030912.1 MGP_WSBEiJ_G0018311.1 mouse_genomes_project 11 95486835 95490866 + MGP_WSBEiJ_P0030912 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030913.1 MGP_WSBEiJ_G0018311.1 mouse_genomes_project 11 95486868 95490866 + MGP_WSBEiJ_P0030913 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030914.1 MGP_WSBEiJ_G0018311.1 mouse_genomes_project 11 95489532 95490866 + MGP_WSBEiJ_P0030914 protein_coding protein_coding MGP_WSBEiJ_T0029979.1 MGP_WSBEiJ_G0018084.1 mouse_genomes_project 11 76014609 76123330 - MGP_WSBEiJ_P0029979 Rph3al protein_coding protein_coding MGP_WSBEiJ_T0029980.1 MGP_WSBEiJ_G0018084.1 mouse_genomes_project 11 76015747 76096658 - MGP_WSBEiJ_P0029980 Rph3al protein_coding protein_coding MGP_WSBEiJ_T0029981.1 MGP_WSBEiJ_G0018084.1 mouse_genomes_project 11 76085357 76111491 - MGP_WSBEiJ_P0029981 Rph3al protein_coding protein_coding MGP_WSBEiJ_T0029982.1 MGP_WSBEiJ_G0018084.1 mouse_genomes_project 11 76086374 76123289 - MGP_WSBEiJ_P0029982 Rph3al protein_coding protein_coding MGP_WSBEiJ_T0029983.1 MGP_WSBEiJ_G0018084.1 mouse_genomes_project 11 76092175 76124021 - MGP_WSBEiJ_P0029983 Rph3al protein_coding protein_coding MGP_WSBEiJ_T0009600.1 MGP_WSBEiJ_G0007757.1 mouse_genomes_project 11 103251044 103251123 - Gm25593 miRNA miRNA MGP_WSBEiJ_T0006116.1 MGP_WSBEiJ_G0005107.1 mouse_genomes_project 11 27274278 27311497 - Gm12092 lincRNA lincRNA MGP_WSBEiJ_T0032546.1 MGP_WSBEiJ_G0018722.1 mouse_genomes_project 11 117746406 117761580 - Cd300c protein_coding processed_transcript MGP_WSBEiJ_T0032547.1 MGP_WSBEiJ_G0018722.1 mouse_genomes_project 11 117746558 117750641 - MGP_WSBEiJ_P0032547 Cd300c protein_coding protein_coding MGP_WSBEiJ_T0032548.1 MGP_WSBEiJ_G0018722.1 mouse_genomes_project 11 117746568 117750641 - MGP_WSBEiJ_P0032548 Cd300c protein_coding protein_coding MGP_WSBEiJ_T0032580.1 MGP_WSBEiJ_G0018732.1 mouse_genomes_project 11 118059075 118075334 - MGP_WSBEiJ_P0032580 Grin2c protein_coding protein_coding MGP_WSBEiJ_T0032581.1 MGP_WSBEiJ_G0018732.1 mouse_genomes_project 11 118059075 118077148 - MGP_WSBEiJ_P0032581 Grin2c protein_coding protein_coding MGP_WSBEiJ_T0031474.1 MGP_WSBEiJ_G0018461.1 mouse_genomes_project 11 101330919 101331798 - MGP_WSBEiJ_P0031474 Krtap1-3 protein_coding protein_coding MGP_WSBEiJ_T0028498.1 MGP_WSBEiJ_G0017716.1 mouse_genomes_project 11 57449092 57454022 + MGP_WSBEiJ_P0028498 1810065E05Rik protein_coding protein_coding MGP_WSBEiJ_T0033337.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123860979 123863667 + Aspscr1 protein_coding retained_intron MGP_WSBEiJ_T0033338.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861032 123865230 + Aspscr1 protein_coding retained_intron MGP_WSBEiJ_T0033339.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861069 123894543 + MGP_WSBEiJ_P0033339 Aspscr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033340.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861075 123902998 + MGP_WSBEiJ_P0033340 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033341.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861089 123902713 + MGP_WSBEiJ_P0033341 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033342.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861104 123880301 + MGP_WSBEiJ_P0033342 Aspscr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033343.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861365 123880404 + MGP_WSBEiJ_P0033343 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033344.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861380 123880400 + MGP_WSBEiJ_P0033344 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033345.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861380 123867702 + MGP_WSBEiJ_P0033345 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033346.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861398 123880360 + MGP_WSBEiJ_P0033346 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033347.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123861410 123877934 + MGP_WSBEiJ_P0033347 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033348.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123865909 123903083 + MGP_WSBEiJ_P0033348 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033349.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123866474 123867694 + MGP_WSBEiJ_P0033349 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033350.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123866587 123880530 + MGP_WSBEiJ_P0033350 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033351.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123877925 123903084 + MGP_WSBEiJ_P0033351 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033352.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123880506 123903084 + MGP_WSBEiJ_P0033352 Aspscr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033353.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123880542 123902882 + MGP_WSBEiJ_P0033353 Aspscr1 protein_coding protein_coding MGP_WSBEiJ_T0033354.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123895492 123903085 + MGP_WSBEiJ_P0033354 Aspscr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033355.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123902298 123903083 + Aspscr1 protein_coding retained_intron MGP_WSBEiJ_T0033356.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123902400 123903088 + Aspscr1 protein_coding retained_intron MGP_WSBEiJ_T0033357.1 MGP_WSBEiJ_G0018876.1 mouse_genomes_project 11 123902498 123903086 + Aspscr1 protein_coding retained_intron MGP_WSBEiJ_T0032901.1 MGP_WSBEiJ_G0018789.1 mouse_genomes_project 11 119516988 119544958 - MGP_WSBEiJ_P0032901 Rhbdf2 protein_coding protein_coding MGP_WSBEiJ_T0032902.1 MGP_WSBEiJ_G0018789.1 mouse_genomes_project 11 119516992 119547765 - MGP_WSBEiJ_P0032902 Rhbdf2 protein_coding protein_coding MGP_WSBEiJ_T0032903.1 MGP_WSBEiJ_G0018789.1 mouse_genomes_project 11 119519909 119521486 - Rhbdf2 protein_coding processed_transcript MGP_WSBEiJ_T0032904.1 MGP_WSBEiJ_G0018789.1 mouse_genomes_project 11 119522143 119545005 - Rhbdf2 protein_coding retained_intron MGP_WSBEiJ_T0030829.1 MGP_WSBEiJ_G0018290.1 mouse_genomes_project 11 90074655 90093437 + MGP_WSBEiJ_P0030829 Gm525 protein_coding protein_coding MGP_WSBEiJ_T0030830.1 MGP_WSBEiJ_G0018290.1 mouse_genomes_project 11 90075886 90093362 + MGP_WSBEiJ_P0030830 Gm525 protein_coding protein_coding MGP_WSBEiJ_T0032586.1 MGP_WSBEiJ_G0018734.1 mouse_genomes_project 11 118089573 118108592 - MGP_WSBEiJ_P0032586 Fads6 protein_coding protein_coding MGP_WSBEiJ_T0032587.1 MGP_WSBEiJ_G0018734.1 mouse_genomes_project 11 118106023 118108741 - Fads6 protein_coding processed_transcript MGP_WSBEiJ_T0006083.1 MGP_WSBEiJ_G0005079.1 mouse_genomes_project 11 11679472 11724799 - 1700046C09Rik lincRNA lincRNA MGP_WSBEiJ_T0012344.1 MGP_WSBEiJ_G0010474.1 mouse_genomes_project 11 52761347 52761790 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031522.1 MGP_WSBEiJ_G0018501.1 mouse_genomes_project 11 102072937 102077750 - MGP_WSBEiJ_P0031522 Krt17 protein_coding protein_coding MGP_WSBEiJ_T0003085.1 MGP_WSBEiJ_G0002872.1 mouse_genomes_project 11 50682698 50683273 - Gm12205 antisense antisense MGP_WSBEiJ_T0032593.1 MGP_WSBEiJ_G0018737.1 mouse_genomes_project 11 118150120 118162252 + MGP_WSBEiJ_P0032593 Otop3 protein_coding protein_coding MGP_WSBEiJ_T0032594.1 MGP_WSBEiJ_G0018737.1 mouse_genomes_project 11 118150123 118162251 + MGP_WSBEiJ_P0032594 Otop3 protein_coding protein_coding MGP_WSBEiJ_T0031468.1 MGP_WSBEiJ_G0018455.1 mouse_genomes_project 11 101289950 101290682 - MGP_WSBEiJ_P0031468 protein_coding protein_coding MGP_WSBEiJ_T0006273.1 MGP_WSBEiJ_G0005229.1 mouse_genomes_project 11 119204189 119206795 + Gm26730 lincRNA lincRNA MGP_WSBEiJ_T0032654.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118409765 118431952 + MGP_WSBEiJ_P0032654 Nup85 protein_coding protein_coding MGP_WSBEiJ_T0032655.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118409856 118416151 + Nup85 protein_coding processed_transcript MGP_WSBEiJ_T0032656.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118416374 118429810 + MGP_WSBEiJ_P0032656 Nup85 protein_coding protein_coding MGP_WSBEiJ_T0032657.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118424604 118430006 + MGP_WSBEiJ_P0032657 Nup85 protein_coding protein_coding MGP_WSBEiJ_T0032658.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118428470 118429386 + Nup85 protein_coding processed_transcript MGP_WSBEiJ_T0032659.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118429062 118430001 + Nup85 protein_coding processed_transcript MGP_WSBEiJ_T0032660.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118429607 118431873 + Nup85 protein_coding processed_transcript MGP_WSBEiJ_T0032661.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118429714 118430245 + Nup85 protein_coding processed_transcript MGP_WSBEiJ_T0032662.1 MGP_WSBEiJ_G0018749.1 mouse_genomes_project 11 118431023 118431750 + Nup85 protein_coding processed_transcript MGP_WSBEiJ_T0029042.1 MGP_WSBEiJ_G0017860.1 mouse_genomes_project 11 67556203 67812316 + MGP_WSBEiJ_P0029042 Stx8 protein_coding protein_coding MGP_WSBEiJ_T0029043.1 MGP_WSBEiJ_G0017860.1 mouse_genomes_project 11 67556479 67578994 + MGP_WSBEiJ_P0029043 Stx8 protein_coding protein_coding MGP_WSBEiJ_T0029044.1 MGP_WSBEiJ_G0017860.1 mouse_genomes_project 11 67556490 67564604 + MGP_WSBEiJ_P0029044 Stx8 protein_coding protein_coding MGP_WSBEiJ_T0029045.1 MGP_WSBEiJ_G0017860.1 mouse_genomes_project 11 67556500 67807850 + Stx8 protein_coding processed_transcript MGP_WSBEiJ_T0029046.1 MGP_WSBEiJ_G0017860.1 mouse_genomes_project 11 67556502 67564477 + Stx8 protein_coding processed_transcript MGP_WSBEiJ_T0029047.1 MGP_WSBEiJ_G0017860.1 mouse_genomes_project 11 67556516 67563654 + Stx8 protein_coding processed_transcript MGP_WSBEiJ_T0003068.1 MGP_WSBEiJ_G0002855.1 mouse_genomes_project 11 31539709 31547436 + Gm12120 antisense antisense MGP_WSBEiJ_T0028610.1 MGP_WSBEiJ_G0017766.1 mouse_genomes_project 11 58985334 58989097 - Pld6 protein_coding processed_transcript MGP_WSBEiJ_T0028611.1 MGP_WSBEiJ_G0017766.1 mouse_genomes_project 11 58986154 58989094 - MGP_WSBEiJ_P0028611 Pld6 protein_coding protein_coding MGP_WSBEiJ_T0012330.1 MGP_WSBEiJ_G0010460.1 mouse_genomes_project 11 47520148 47520458 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011117.1 MGP_WSBEiJ_G0009274.1 mouse_genomes_project 11 97594783 97594919 - Gm27605 misc_RNA misc_RNA MGP_WSBEiJ_T0033488.1 MGP_WSBEiJ_G0018909.1 mouse_genomes_project 11 125055974 125062516 + Ptchd3 protein_coding retained_intron MGP_WSBEiJ_T0033489.1 MGP_WSBEiJ_G0018909.1 mouse_genomes_project 11 125055974 125069151 + MGP_WSBEiJ_P0033489 Ptchd3 protein_coding protein_coding MGP_WSBEiJ_T0029260.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69426995 69432499 - MGP_WSBEiJ_P0029260 Eif4a1 protein_coding protein_coding MGP_WSBEiJ_T0029261.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69426996 69432499 - Eif4a1 protein_coding retained_intron MGP_WSBEiJ_T0029262.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69427611 69428471 - Eif4a1 protein_coding processed_transcript MGP_WSBEiJ_T0029263.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69428663 69432605 - MGP_WSBEiJ_P0029263 Eif4a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029264.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69429336 69432498 - Eif4a1 protein_coding processed_transcript MGP_WSBEiJ_T0029265.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69429344 69431065 - Eif4a1 protein_coding processed_transcript MGP_WSBEiJ_T0029266.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69430314 69432497 - Eif4a1 protein_coding processed_transcript MGP_WSBEiJ_T0029267.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69430361 69431912 - Eif4a1 protein_coding processed_transcript MGP_WSBEiJ_T0029268.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69430429 69431404 - Eif4a1 protein_coding retained_intron MGP_WSBEiJ_T0029269.1 MGP_WSBEiJ_G0017908.1 mouse_genomes_project 11 69430650 69431632 - Eif4a1 protein_coding retained_intron MGP_WSBEiJ_T0003269.1 MGP_WSBEiJ_G0003021.1 mouse_genomes_project 11 118819416 118825072 - Sap30bpos antisense antisense MGP_WSBEiJ_T0003151.1 MGP_WSBEiJ_G0002926.1 mouse_genomes_project 11 70437570 70439541 - Gm12316 antisense antisense MGP_WSBEiJ_T0009565.1 MGP_WSBEiJ_G0007722.1 mouse_genomes_project 11 75456985 75457106 - miRNA miRNA MGP_WSBEiJ_T0097741.1 MGP_WSBEiJ_G0036404.1 mouse_genomes_project 11 108479194 108479302 + Gm23645 snRNA snRNA MGP_WSBEiJ_T0031547.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102246662 102265455 - MGP_WSBEiJ_P0031547 Nt5c3b protein_coding protein_coding MGP_WSBEiJ_T0031548.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102246662 102266174 - MGP_WSBEiJ_P0031548 Nt5c3b protein_coding protein_coding MGP_WSBEiJ_T0031550.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102254132 102265421 - MGP_WSBEiJ_P0031550 Nt5c3b protein_coding protein_coding MGP_WSBEiJ_T0031551.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102254199 102255828 - Nt5c3b protein_coding processed_transcript MGP_WSBEiJ_T0031552.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102257203 102265282 - Nt5c3b protein_coding processed_transcript MGP_WSBEiJ_T0031553.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102257240 102265439 - Nt5c3b protein_coding processed_transcript MGP_WSBEiJ_T0031554.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102257990 102265382 - Nt5c3b protein_coding processed_transcript MGP_WSBEiJ_T0031555.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102262657 102265295 - Nt5c3b protein_coding processed_transcript MGP_WSBEiJ_T0031556.1 MGP_WSBEiJ_G0018509.1 mouse_genomes_project 11 102263918 102265293 - Nt5c3b protein_coding processed_transcript MGP_WSBEiJ_T0032512.1 MGP_WSBEiJ_G0018715.1 mouse_genomes_project 11 117493219 117527724 + MGP_WSBEiJ_P0032512 Dnaic2 protein_coding protein_coding MGP_WSBEiJ_T0032513.1 MGP_WSBEiJ_G0018715.1 mouse_genomes_project 11 117493262 117515089 + Dnaic2 protein_coding processed_transcript MGP_WSBEiJ_T0032514.1 MGP_WSBEiJ_G0018715.1 mouse_genomes_project 11 117493270 117524192 + Dnaic2 protein_coding processed_transcript MGP_WSBEiJ_T0032515.1 MGP_WSBEiJ_G0018715.1 mouse_genomes_project 11 117499249 117524302 + MGP_WSBEiJ_P0032515 Dnaic2 protein_coding protein_coding MGP_WSBEiJ_T0032516.1 MGP_WSBEiJ_G0018715.1 mouse_genomes_project 11 117505014 117523909 + Dnaic2 protein_coding processed_transcript MGP_WSBEiJ_T0032517.1 MGP_WSBEiJ_G0018715.1 mouse_genomes_project 11 117522515 117526994 + Dnaic2 protein_coding processed_transcript MGP_WSBEiJ_T0030960.1 MGP_WSBEiJ_G0018318.1 mouse_genomes_project 11 95726899 95750039 - Mycbpap protein_coding retained_intron MGP_WSBEiJ_T0030961.1 MGP_WSBEiJ_G0018318.1 mouse_genomes_project 11 95726899 95729118 - Mycbpap protein_coding processed_transcript MGP_WSBEiJ_T0030962.1 MGP_WSBEiJ_G0018318.1 mouse_genomes_project 11 95726899 95732899 - MGP_WSBEiJ_P0030962 Mycbpap protein_coding protein_coding MGP_WSBEiJ_T0030963.1 MGP_WSBEiJ_G0018318.1 mouse_genomes_project 11 95726899 95750039 - MGP_WSBEiJ_P0030963 Mycbpap protein_coding protein_coding MGP_WSBEiJ_T0030964.1 MGP_WSBEiJ_G0018318.1 mouse_genomes_project 11 95728552 95729105 - Mycbpap protein_coding retained_intron MGP_WSBEiJ_T0030965.1 MGP_WSBEiJ_G0018318.1 mouse_genomes_project 11 95733243 95735708 - Mycbpap protein_coding retained_intron MGP_WSBEiJ_T0029218.1 MGP_WSBEiJ_G0017898.1 mouse_genomes_project 11 69303914 69310030 - MGP_WSBEiJ_P0029218 Efnb3 protein_coding protein_coding MGP_WSBEiJ_T0032622.1 MGP_WSBEiJ_G0018742.1 mouse_genomes_project 11 118239290 118250491 + MGP_WSBEiJ_P0032622 Kctd2 protein_coding protein_coding MGP_WSBEiJ_T0032623.1 MGP_WSBEiJ_G0018742.1 mouse_genomes_project 11 118239312 118250491 + MGP_WSBEiJ_P0032623 Kctd2 protein_coding protein_coding MGP_WSBEiJ_T0032624.1 MGP_WSBEiJ_G0018742.1 mouse_genomes_project 11 118239344 118249258 + MGP_WSBEiJ_P0032624 Kctd2 protein_coding protein_coding MGP_WSBEiJ_T0032625.1 MGP_WSBEiJ_G0018742.1 mouse_genomes_project 11 118239474 118241588 + Kctd2 protein_coding retained_intron MGP_WSBEiJ_T0032626.1 MGP_WSBEiJ_G0018742.1 mouse_genomes_project 11 118248569 118249418 + Kctd2 protein_coding processed_transcript MGP_WSBEiJ_T0000808.1 MGP_WSBEiJ_G0000747.1 mouse_genomes_project 11 6807200 6807563 - TEC TEC MGP_WSBEiJ_T0030224.1 MGP_WSBEiJ_G0018133.1 mouse_genomes_project 11 78621486 78624390 + MGP_WSBEiJ_P0030224 BC030499 protein_coding protein_coding MGP_WSBEiJ_T0030225.1 MGP_WSBEiJ_G0018133.1 mouse_genomes_project 11 78621537 78625988 + BC030499 protein_coding retained_intron MGP_WSBEiJ_T0030226.1 MGP_WSBEiJ_G0018133.1 mouse_genomes_project 11 78621539 78624463 + BC030499 protein_coding retained_intron MGP_WSBEiJ_T0030227.1 MGP_WSBEiJ_G0018133.1 mouse_genomes_project 11 78621574 78624478 + BC030499 protein_coding retained_intron MGP_WSBEiJ_T0030228.1 MGP_WSBEiJ_G0018133.1 mouse_genomes_project 11 78622122 78627460 + MGP_WSBEiJ_P0030228 BC030499 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030229.1 MGP_WSBEiJ_G0018133.1 mouse_genomes_project 11 78622200 78622808 + BC030499 protein_coding retained_intron MGP_WSBEiJ_T0030230.1 MGP_WSBEiJ_G0018133.1 mouse_genomes_project 11 78624451 78627451 + BC030499 protein_coding retained_intron MGP_WSBEiJ_T0012339.1 MGP_WSBEiJ_G0010469.1 mouse_genomes_project 11 52235045 52235621 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000813.1 MGP_WSBEiJ_G0000752.1 mouse_genomes_project 11 16207393 16208260 - TEC TEC MGP_WSBEiJ_T0031445.1 MGP_WSBEiJ_G0018442.1 mouse_genomes_project 11 100930204 100951880 - MGP_WSBEiJ_P0031445 Smarce1 protein_coding protein_coding MGP_WSBEiJ_T0031446.1 MGP_WSBEiJ_G0018442.1 mouse_genomes_project 11 100931160 100934222 - Smarce1 protein_coding processed_transcript MGP_WSBEiJ_T0031447.1 MGP_WSBEiJ_G0018442.1 mouse_genomes_project 11 100939992 100941604 - Smarce1 protein_coding processed_transcript MGP_WSBEiJ_T0031448.1 MGP_WSBEiJ_G0018442.1 mouse_genomes_project 11 100940401 100951251 - Smarce1 protein_coding processed_transcript MGP_WSBEiJ_T0031449.1 MGP_WSBEiJ_G0018442.1 mouse_genomes_project 11 100940481 100951219 - Smarce1 protein_coding processed_transcript MGP_WSBEiJ_T0031450.1 MGP_WSBEiJ_G0018442.1 mouse_genomes_project 11 100946099 100951252 - Smarce1 protein_coding processed_transcript MGP_WSBEiJ_T0028909.1 MGP_WSBEiJ_G0017822.1 mouse_genomes_project 11 62077867 62109528 - MGP_WSBEiJ_P0028909 Zfp287 protein_coding protein_coding MGP_WSBEiJ_T0028910.1 MGP_WSBEiJ_G0017822.1 mouse_genomes_project 11 62091272 62106309 - MGP_WSBEiJ_P0028910 Zfp287 protein_coding protein_coding MGP_WSBEiJ_T0028911.1 MGP_WSBEiJ_G0017822.1 mouse_genomes_project 11 62099252 62106314 - MGP_WSBEiJ_P0028911 Zfp287 protein_coding protein_coding MGP_WSBEiJ_T0028912.1 MGP_WSBEiJ_G0017822.1 mouse_genomes_project 11 62104364 62109548 - Zfp287 protein_coding retained_intron MGP_WSBEiJ_T0027008.1 MGP_WSBEiJ_G0017338.1 mouse_genomes_project 11 802897 842546 - MGP_WSBEiJ_P0027008 4930556J24Rik protein_coding protein_coding MGP_WSBEiJ_T0006256.1 MGP_WSBEiJ_G0005217.1 mouse_genomes_project 11 114340608 114346250 - Gm11674 lincRNA lincRNA MGP_WSBEiJ_T0012487.1 MGP_WSBEiJ_G0010617.1 mouse_genomes_project 11 109626374 109626725 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029201.1 MGP_WSBEiJ_G0017893.1 mouse_genomes_project 11 69131774 69135691 - Gm6685 protein_coding processed_transcript MGP_WSBEiJ_T0029202.1 MGP_WSBEiJ_G0017893.1 mouse_genomes_project 11 69133109 69135393 - MGP_WSBEiJ_P0029202 Gm6685 protein_coding protein_coding MGP_WSBEiJ_T0029203.1 MGP_WSBEiJ_G0017893.1 mouse_genomes_project 11 69133462 69135393 - MGP_WSBEiJ_P0029203 Gm6685 protein_coding protein_coding MGP_WSBEiJ_T0031395.1 MGP_WSBEiJ_G0018430.1 mouse_genomes_project 11 100435166 100442567 - MGP_WSBEiJ_P0031395 Nr1d1 protein_coding protein_coding MGP_WSBEiJ_T0031396.1 MGP_WSBEiJ_G0018430.1 mouse_genomes_project 11 100436581 100437661 - Nr1d1 protein_coding processed_transcript MGP_WSBEiJ_T0032127.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106351469 106460115 + MGP_WSBEiJ_P0032127 protein_coding protein_coding MGP_WSBEiJ_T0032128.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106351558 106422323 + protein_coding retained_intron MGP_WSBEiJ_T0032129.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106351563 106433504 + MGP_WSBEiJ_P0032129 protein_coding protein_coding MGP_WSBEiJ_T0032130.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106351594 106456462 + MGP_WSBEiJ_P0032130 protein_coding protein_coding MGP_WSBEiJ_T0032131.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106351652 106433588 + MGP_WSBEiJ_P0032131 protein_coding protein_coding MGP_WSBEiJ_T0032132.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106351658 106433564 + protein_coding processed_transcript MGP_WSBEiJ_T0032133.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106351660 106421930 + MGP_WSBEiJ_P0032133 protein_coding protein_coding MGP_WSBEiJ_T0032134.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106351663 106456246 + MGP_WSBEiJ_P0032134 protein_coding protein_coding MGP_WSBEiJ_T0032135.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106406698 106456214 + MGP_WSBEiJ_P0032135 protein_coding protein_coding MGP_WSBEiJ_T0032136.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106406698 106456214 + MGP_WSBEiJ_P0032136 protein_coding protein_coding MGP_WSBEiJ_T0032137.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106444772 106456268 + protein_coding processed_transcript MGP_WSBEiJ_T0032138.1 MGP_WSBEiJ_G0018628.1 mouse_genomes_project 11 106448705 106456237 + protein_coding processed_transcript MGP_WSBEiJ_T0029700.1 MGP_WSBEiJ_G0017999.1 mouse_genomes_project 11 72311288 72332739 - MGP_WSBEiJ_P0029700 Tekt1 protein_coding protein_coding MGP_WSBEiJ_T0029701.1 MGP_WSBEiJ_G0017999.1 mouse_genomes_project 11 72311288 72332162 - MGP_WSBEiJ_P0029701 Tekt1 protein_coding protein_coding MGP_WSBEiJ_T0029702.1 MGP_WSBEiJ_G0017999.1 mouse_genomes_project 11 72311295 72333308 - MGP_WSBEiJ_P0029702 Tekt1 protein_coding protein_coding MGP_WSBEiJ_T0012439.1 MGP_WSBEiJ_G0010569.1 mouse_genomes_project 11 89402596 89403125 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033219.1 MGP_WSBEiJ_G0018851.1 mouse_genomes_project 11 123529564 123536214 + MGP_WSBEiJ_P0033219 Fscn2 protein_coding protein_coding MGP_WSBEiJ_T0033220.1 MGP_WSBEiJ_G0018851.1 mouse_genomes_project 11 123534587 123535994 + Fscn2 protein_coding processed_transcript MGP_WSBEiJ_T0033221.1 MGP_WSBEiJ_G0018851.1 mouse_genomes_project 11 123534758 123535866 + Fscn2 protein_coding processed_transcript MGP_WSBEiJ_T0028101.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48910846 48923109 + MGP_WSBEiJ_P0028101 Hnrnph1 protein_coding protein_coding MGP_WSBEiJ_T0028102.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48911574 48923108 + MGP_WSBEiJ_P0028102 Hnrnph1 protein_coding protein_coding MGP_WSBEiJ_T0028103.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48911606 48923109 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028104.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48911620 48918765 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028105.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48911624 48921980 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028106.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48911624 48919351 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028107.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48911624 48923109 + MGP_WSBEiJ_P0028107 Hnrnph1 protein_coding protein_coding MGP_WSBEiJ_T0028108.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48912146 48918296 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028109.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48912146 48915935 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028110.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48912146 48915155 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028111.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48912156 48921980 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028112.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48919105 48920364 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028113.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48919245 48920132 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028114.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48919337 48922902 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028115.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48919400 48920078 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028116.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48919969 48920797 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028117.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48919988 48922970 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0028118.1 MGP_WSBEiJ_G0017615.1 mouse_genomes_project 11 48921066 48922807 + Hnrnph1 protein_coding processed_transcript MGP_WSBEiJ_T0027522.1 MGP_WSBEiJ_G0017457.1 mouse_genomes_project 11 20897773 20906771 - MGP_WSBEiJ_P0027522 Ahsa2 protein_coding protein_coding MGP_WSBEiJ_T0027523.1 MGP_WSBEiJ_G0017457.1 mouse_genomes_project 11 20898807 20901531 - Ahsa2 protein_coding processed_transcript MGP_WSBEiJ_T0027524.1 MGP_WSBEiJ_G0017457.1 mouse_genomes_project 11 20898971 20907087 - MGP_WSBEiJ_P0027524 Ahsa2 protein_coding protein_coding MGP_WSBEiJ_T0027525.1 MGP_WSBEiJ_G0017457.1 mouse_genomes_project 11 20899545 20900649 - Ahsa2 protein_coding processed_transcript MGP_WSBEiJ_T0027526.1 MGP_WSBEiJ_G0017457.1 mouse_genomes_project 11 20899651 20900302 - Ahsa2 protein_coding processed_transcript MGP_WSBEiJ_T0027527.1 MGP_WSBEiJ_G0017457.1 mouse_genomes_project 11 20900333 20907138 - MGP_WSBEiJ_P0027527 Ahsa2 protein_coding protein_coding MGP_WSBEiJ_T0027528.1 MGP_WSBEiJ_G0017457.1 mouse_genomes_project 11 20902386 20907128 - MGP_WSBEiJ_P0027528 Ahsa2 protein_coding protein_coding MGP_WSBEiJ_T0098938.1 MGP_WSBEiJ_G0037601.1 mouse_genomes_project 11 77942516 77942648 - Gm23132 snoRNA snoRNA MGP_WSBEiJ_T0027894.1 MGP_WSBEiJ_G0017550.1 mouse_genomes_project 11 42820905 43233184 + MGP_WSBEiJ_P0027894 Ebf1 protein_coding protein_coding MGP_WSBEiJ_T0027895.1 MGP_WSBEiJ_G0017550.1 mouse_genomes_project 11 42820905 43233718 + MGP_WSBEiJ_P0027895 Ebf1 protein_coding protein_coding MGP_WSBEiJ_T0027896.1 MGP_WSBEiJ_G0017550.1 mouse_genomes_project 11 42820905 43236611 + MGP_WSBEiJ_P0027896 Ebf1 protein_coding protein_coding MGP_WSBEiJ_T0027897.1 MGP_WSBEiJ_G0017550.1 mouse_genomes_project 11 42822700 42851558 + Ebf1 protein_coding processed_transcript MGP_WSBEiJ_T0027898.1 MGP_WSBEiJ_G0017550.1 mouse_genomes_project 11 42822763 42848211 + Ebf1 protein_coding processed_transcript MGP_WSBEiJ_T0027899.1 MGP_WSBEiJ_G0017550.1 mouse_genomes_project 11 42826383 42848201 + Ebf1 protein_coding processed_transcript MGP_WSBEiJ_T0027900.1 MGP_WSBEiJ_G0017550.1 mouse_genomes_project 11 43134848 43199319 + Ebf1 protein_coding processed_transcript MGP_WSBEiJ_T0097673.1 MGP_WSBEiJ_G0036336.1 mouse_genomes_project 11 2184197 2184304 + Gm25142 snRNA snRNA MGP_WSBEiJ_T0027381.1 MGP_WSBEiJ_G0017422.1 mouse_genomes_project 11 13918749 14061118 + MGP_WSBEiJ_P0027381 Egfr protein_coding protein_coding MGP_WSBEiJ_T0027382.1 MGP_WSBEiJ_G0017422.1 mouse_genomes_project 11 13918757 14092073 + MGP_WSBEiJ_P0027382 Egfr protein_coding protein_coding MGP_WSBEiJ_T0027383.1 MGP_WSBEiJ_G0017422.1 mouse_genomes_project 11 13918776 13961033 + Egfr protein_coding processed_transcript MGP_WSBEiJ_T0027384.1 MGP_WSBEiJ_G0017422.1 mouse_genomes_project 11 14078373 14083997 + Egfr protein_coding processed_transcript MGP_WSBEiJ_T0016561.1 MGP_WSBEiJ_G0014570.1 mouse_genomes_project 11 8761618 8806749 - Gm11999 processed_transcript processed_transcript MGP_WSBEiJ_T0030494.1 MGP_WSBEiJ_G0018207.1 mouse_genomes_project 11 84090883 84099271 - MGP_WSBEiJ_P0030494 Gas2l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030495.1 MGP_WSBEiJ_G0018207.1 mouse_genomes_project 11 84090883 84099271 - MGP_WSBEiJ_P0030495 Gas2l2 protein_coding protein_coding MGP_WSBEiJ_T0033002.1 MGP_WSBEiJ_G0018808.1 mouse_genomes_project 11 120849238 120853023 + MGP_WSBEiJ_P0033002 Syngr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033003.1 MGP_WSBEiJ_G0018808.1 mouse_genomes_project 11 120849241 120853860 + MGP_WSBEiJ_P0033003 Syngr2 protein_coding protein_coding MGP_WSBEiJ_T0033004.1 MGP_WSBEiJ_G0018808.1 mouse_genomes_project 11 120849250 120853023 + MGP_WSBEiJ_P0033004 Syngr2 protein_coding protein_coding MGP_WSBEiJ_T0033005.1 MGP_WSBEiJ_G0018808.1 mouse_genomes_project 11 120851805 120852666 + MGP_WSBEiJ_P0033005 Syngr2 protein_coding protein_coding MGP_WSBEiJ_T0033006.1 MGP_WSBEiJ_G0018808.1 mouse_genomes_project 11 120852538 120852960 + Syngr2 protein_coding retained_intron MGP_WSBEiJ_T0012358.1 MGP_WSBEiJ_G0010488.1 mouse_genomes_project 11 57756553 57757568 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028506.1 MGP_WSBEiJ_G0017723.1 mouse_genomes_project 11 57602225 57603362 - MGP_WSBEiJ_P0028506 protein_coding protein_coding MGP_WSBEiJ_T0006189.1 MGP_WSBEiJ_G0005170.1 mouse_genomes_project 11 77752082 77753639 + 2210008F06Rik lincRNA lincRNA MGP_WSBEiJ_T0012246.1 MGP_WSBEiJ_G0010376.1 mouse_genomes_project 11 15716936 15718537 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100344.1 MGP_WSBEiJ_G0038827.1 mouse_genomes_project 11 104774723 104796111 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0030453.1 MGP_WSBEiJ_G0018195.1 mouse_genomes_project 11 83526739 83534378 - MGP_WSBEiJ_P0030453 Nle1 protein_coding protein_coding MGP_WSBEiJ_T0030454.1 MGP_WSBEiJ_G0018195.1 mouse_genomes_project 11 83526743 83527795 - Nle1 protein_coding retained_intron MGP_WSBEiJ_T0030455.1 MGP_WSBEiJ_G0018195.1 mouse_genomes_project 11 83526751 83530240 - MGP_WSBEiJ_P0030455 Nle1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030456.1 MGP_WSBEiJ_G0018195.1 mouse_genomes_project 11 83527717 83530219 - Nle1 protein_coding retained_intron MGP_WSBEiJ_T0030457.1 MGP_WSBEiJ_G0018195.1 mouse_genomes_project 11 83530056 83530587 - Nle1 protein_coding retained_intron MGP_WSBEiJ_T0030458.1 MGP_WSBEiJ_G0018195.1 mouse_genomes_project 11 83530742 83533654 - MGP_WSBEiJ_P0030458 Nle1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030459.1 MGP_WSBEiJ_G0018195.1 mouse_genomes_project 11 83530872 83534309 - Nle1 protein_coding retained_intron MGP_WSBEiJ_T0006096.1 MGP_WSBEiJ_G0005091.1 mouse_genomes_project 11 19960676 19961756 + Gm12052 lincRNA lincRNA MGP_WSBEiJ_T0030620.1 MGP_WSBEiJ_G0018241.1 mouse_genomes_project 11 86068951 86112631 + MGP_WSBEiJ_P0030620 Ppm1d protein_coding protein_coding MGP_WSBEiJ_T0030621.1 MGP_WSBEiJ_G0018241.1 mouse_genomes_project 11 86069871 86102768 + MGP_WSBEiJ_P0030621 Ppm1d protein_coding protein_coding MGP_WSBEiJ_T0028504.1 MGP_WSBEiJ_G0017721.1 mouse_genomes_project 11 57593706 57603361 - MGP_WSBEiJ_P0028504 protein_coding protein_coding MGP_WSBEiJ_T0098926.1 MGP_WSBEiJ_G0037589.1 mouse_genomes_project 11 61968365 61968437 + Snord65 snoRNA snoRNA MGP_WSBEiJ_T0029656.1 MGP_WSBEiJ_G0017986.1 mouse_genomes_project 11 70941527 70989785 - MGP_WSBEiJ_P0029656 Nlrp1a protein_coding protein_coding MGP_WSBEiJ_T0029657.1 MGP_WSBEiJ_G0017986.1 mouse_genomes_project 11 70941527 70992093 - MGP_WSBEiJ_P0029657 Nlrp1a protein_coding protein_coding MGP_WSBEiJ_T0098907.1 MGP_WSBEiJ_G0037570.1 mouse_genomes_project 11 23151838 23151968 + Gm23514 snoRNA snoRNA MGP_WSBEiJ_T0003076.1 MGP_WSBEiJ_G0002863.1 mouse_genomes_project 11 42864239 42867384 - Gm12158 antisense antisense MGP_WSBEiJ_T0028529.1 MGP_WSBEiJ_G0017739.1 mouse_genomes_project 11 57973739 57988533 + MGP_WSBEiJ_P0028529 Gm12258 protein_coding protein_coding MGP_WSBEiJ_T0028530.1 MGP_WSBEiJ_G0017739.1 mouse_genomes_project 11 57973777 57977973 + Gm12258 protein_coding processed_transcript MGP_WSBEiJ_T0016595.1 MGP_WSBEiJ_G0014589.1 mouse_genomes_project 11 58097761 58111029 - 2310058D17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016688.1 MGP_WSBEiJ_G0014636.1 mouse_genomes_project 11 120430833 120443520 + Gm11732 processed_transcript processed_transcript MGP_WSBEiJ_T0003154.1 MGP_WSBEiJ_G0002929.1 mouse_genomes_project 11 76044498 76045024 + Gm16075 antisense antisense MGP_WSBEiJ_T0003155.1 MGP_WSBEiJ_G0002930.1 mouse_genomes_project 11 77245412 77246372 - Gm12343 antisense antisense MGP_WSBEiJ_T0016666.1 MGP_WSBEiJ_G0014631.1 mouse_genomes_project 11 109735437 109746460 + Gm11714 processed_transcript processed_transcript MGP_WSBEiJ_T0003171.1 MGP_WSBEiJ_G0002944.1 mouse_genomes_project 11 83569020 83588114 - Slfn5os antisense antisense MGP_WSBEiJ_T0012230.1 MGP_WSBEiJ_G0010360.1 mouse_genomes_project 11 11267311 11267690 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027392.1 MGP_WSBEiJ_G0017426.1 mouse_genomes_project 11 14345542 14388088 + MGP_WSBEiJ_P0027392 Ppp3r1 protein_coding protein_coding MGP_WSBEiJ_T0027394.1 MGP_WSBEiJ_G0017426.1 mouse_genomes_project 11 14380555 14382820 + Ppp3r1 protein_coding processed_transcript MGP_WSBEiJ_T0028545.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58127047 58300502 - MGP_WSBEiJ_P0028545 protein_coding protein_coding MGP_WSBEiJ_T0028546.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58127050 58168824 - MGP_WSBEiJ_P0028546 protein_coding protein_coding MGP_WSBEiJ_T0028547.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58127123 58144470 - MGP_WSBEiJ_P0028547 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028548.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58127123 58144570 - MGP_WSBEiJ_P0028548 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028549.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58145750 58168797 - MGP_WSBEiJ_P0028549 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028550.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58145750 58300529 - MGP_WSBEiJ_P0028550 protein_coding protein_coding MGP_WSBEiJ_T0028551.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58145750 58300502 - MGP_WSBEiJ_P0028551 protein_coding protein_coding MGP_WSBEiJ_T0028552.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58145751 58163254 - MGP_WSBEiJ_P0028552 protein_coding protein_coding MGP_WSBEiJ_T0028553.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58146264 58228627 - MGP_WSBEiJ_P0028553 protein_coding unknown_likely_coding MGP_WSBEiJ_T0028554.1 MGP_WSBEiJ_G0017748.1 mouse_genomes_project 11 58213886 58220441 - MGP_WSBEiJ_P0028554 protein_coding protein_coding MGP_WSBEiJ_T0031190.1 MGP_WSBEiJ_G0018383.1 mouse_genomes_project 11 98609101 98622650 - MGP_WSBEiJ_P0031190 Tbkbp1 protein_coding protein_coding MGP_WSBEiJ_T0031191.1 MGP_WSBEiJ_G0018383.1 mouse_genomes_project 11 98609103 98622650 - MGP_WSBEiJ_P0031191 Tbkbp1 protein_coding protein_coding MGP_WSBEiJ_T0031192.1 MGP_WSBEiJ_G0018383.1 mouse_genomes_project 11 98609107 98622984 - MGP_WSBEiJ_P0031192 Tbkbp1 protein_coding protein_coding MGP_WSBEiJ_T0031193.1 MGP_WSBEiJ_G0018383.1 mouse_genomes_project 11 98610029 98623974 - MGP_WSBEiJ_P0031193 Tbkbp1 protein_coding protein_coding MGP_WSBEiJ_T0031194.1 MGP_WSBEiJ_G0018383.1 mouse_genomes_project 11 98611336 98622986 - MGP_WSBEiJ_P0031194 Tbkbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031195.1 MGP_WSBEiJ_G0018383.1 mouse_genomes_project 11 98621566 98625384 - MGP_WSBEiJ_P0031195 Tbkbp1 protein_coding protein_coding MGP_WSBEiJ_T0033075.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121554749 121991921 - MGP_WSBEiJ_P0033075 Rbfox3 protein_coding protein_coding MGP_WSBEiJ_T0033076.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121554751 121834770 - MGP_WSBEiJ_P0033076 Rbfox3 protein_coding protein_coding MGP_WSBEiJ_T0033077.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121556139 121993946 - MGP_WSBEiJ_P0033077 Rbfox3 protein_coding protein_coding MGP_WSBEiJ_T0033078.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121556139 121991933 - MGP_WSBEiJ_P0033078 Rbfox3 protein_coding protein_coding MGP_WSBEiJ_T0033079.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121556187 121991921 - MGP_WSBEiJ_P0033079 Rbfox3 protein_coding protein_coding MGP_WSBEiJ_T0033080.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121556977 121991923 - MGP_WSBEiJ_P0033080 Rbfox3 protein_coding protein_coding MGP_WSBEiJ_T0033081.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121561487 121572445 - MGP_WSBEiJ_P0033081 Rbfox3 protein_coding protein_coding MGP_WSBEiJ_T0033082.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121567942 121637444 - MGP_WSBEiJ_P0033082 Rbfox3 protein_coding protein_coding MGP_WSBEiJ_T0033083.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121887212 121966670 - Rbfox3 protein_coding processed_transcript MGP_WSBEiJ_T0033084.1 MGP_WSBEiJ_G0018825.1 mouse_genomes_project 11 121887214 121990375 - Rbfox3 protein_coding processed_transcript MGP_WSBEiJ_T0006285.1 MGP_WSBEiJ_G0005238.1 mouse_genomes_project 11 122215594 122230979 - Gm11755 lincRNA lincRNA MGP_WSBEiJ_T0027479.1 MGP_WSBEiJ_G0017448.1 mouse_genomes_project 11 20123334 20226812 - MGP_WSBEiJ_P0027479 Gm12057 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032475.1 MGP_WSBEiJ_G0018706.1 mouse_genomes_project 11 116301207 116307878 + MGP_WSBEiJ_P0032475 Sstr2 protein_coding protein_coding MGP_WSBEiJ_T0032476.1 MGP_WSBEiJ_G0018706.1 mouse_genomes_project 11 116301341 116307747 + MGP_WSBEiJ_P0032476 Sstr2 protein_coding protein_coding MGP_WSBEiJ_T0032477.1 MGP_WSBEiJ_G0018706.1 mouse_genomes_project 11 116306108 116307488 + MGP_WSBEiJ_P0032477 Sstr2 protein_coding protein_coding MGP_WSBEiJ_T0026906.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 2435 45850 + MGP_WSBEiJ_P0026906 Eif4enif1 protein_coding protein_coding MGP_WSBEiJ_T0026907.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 2702 22986 + Eif4enif1 protein_coding retained_intron MGP_WSBEiJ_T0026908.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 2702 45857 + MGP_WSBEiJ_P0026908 Eif4enif1 protein_coding protein_coding MGP_WSBEiJ_T0026909.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 2728 13515 + Eif4enif1 protein_coding retained_intron MGP_WSBEiJ_T0026910.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 2773 21205 + MGP_WSBEiJ_P0026910 Eif4enif1 protein_coding protein_coding MGP_WSBEiJ_T0026911.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 3034 45854 + MGP_WSBEiJ_P0026911 Eif4enif1 protein_coding protein_coding MGP_WSBEiJ_T0026912.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 3060 45856 + MGP_WSBEiJ_P0026912 Eif4enif1 protein_coding protein_coding MGP_WSBEiJ_T0026913.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 3670 45855 + MGP_WSBEiJ_P0026913 Eif4enif1 protein_coding protein_coding MGP_WSBEiJ_T0026914.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 28424 31380 + Eif4enif1 protein_coding retained_intron MGP_WSBEiJ_T0026915.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 28424 31343 + Eif4enif1 protein_coding retained_intron MGP_WSBEiJ_T0026916.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 28470 40729 + MGP_WSBEiJ_P0026916 Eif4enif1 protein_coding protein_coding MGP_WSBEiJ_T0026917.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 35443 42245 + Eif4enif1 protein_coding retained_intron MGP_WSBEiJ_T0026918.1 MGP_WSBEiJ_G0017322.1 mouse_genomes_project 11 36769 40711 + Eif4enif1 protein_coding retained_intron MGP_WSBEiJ_T0097715.1 MGP_WSBEiJ_G0036378.1 mouse_genomes_project 11 80062906 80063014 - Gm24887 snRNA snRNA MGP_WSBEiJ_T0009578.1 MGP_WSBEiJ_G0007735.1 mouse_genomes_project 11 87413380 87413472 - Mir21a miRNA miRNA MGP_WSBEiJ_T0097689.1 MGP_WSBEiJ_G0036352.1 mouse_genomes_project 11 37918412 37918557 + Gm24192 snRNA snRNA MGP_WSBEiJ_T0027062.1 MGP_WSBEiJ_G0017352.1 mouse_genomes_project 11 1220009 1319440 - MGP_WSBEiJ_P0027062 Hormad2 protein_coding protein_coding MGP_WSBEiJ_T0027063.1 MGP_WSBEiJ_G0017352.1 mouse_genomes_project 11 1220009 1319798 - MGP_WSBEiJ_P0027063 Hormad2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027064.1 MGP_WSBEiJ_G0017352.1 mouse_genomes_project 11 1220578 1319777 - MGP_WSBEiJ_P0027064 Hormad2 protein_coding protein_coding MGP_WSBEiJ_T0027065.1 MGP_WSBEiJ_G0017352.1 mouse_genomes_project 11 1302764 1306003 - Hormad2 protein_coding processed_transcript MGP_WSBEiJ_T0027066.1 MGP_WSBEiJ_G0017352.1 mouse_genomes_project 11 1302944 1319800 - MGP_WSBEiJ_P0027066 Hormad2 protein_coding protein_coding MGP_WSBEiJ_T0027067.1 MGP_WSBEiJ_G0017352.1 mouse_genomes_project 11 1306054 1314453 - Hormad2 protein_coding processed_transcript MGP_WSBEiJ_T0011123.1 MGP_WSBEiJ_G0009280.1 mouse_genomes_project 11 120108936 120109264 + Gm22667 misc_RNA misc_RNA MGP_WSBEiJ_T0032754.1 MGP_WSBEiJ_G0018763.1 mouse_genomes_project 11 118806263 118841051 + MGP_WSBEiJ_P0032754 Sap30bp protein_coding protein_coding MGP_WSBEiJ_T0032755.1 MGP_WSBEiJ_G0018763.1 mouse_genomes_project 11 118806554 118830270 + Sap30bp protein_coding processed_transcript MGP_WSBEiJ_T0032756.1 MGP_WSBEiJ_G0018763.1 mouse_genomes_project 11 118806618 118811387 + Sap30bp protein_coding processed_transcript MGP_WSBEiJ_T0032757.1 MGP_WSBEiJ_G0018763.1 mouse_genomes_project 11 118806655 118839861 + Sap30bp protein_coding processed_transcript MGP_WSBEiJ_T0032758.1 MGP_WSBEiJ_G0018763.1 mouse_genomes_project 11 118806657 118838736 + MGP_WSBEiJ_P0032758 Sap30bp protein_coding unknown_likely_coding MGP_WSBEiJ_T0030253.1 MGP_WSBEiJ_G0018138.1 mouse_genomes_project 11 78701740 78733368 - MGP_WSBEiJ_P0030253 Foxn1 protein_coding protein_coding MGP_WSBEiJ_T0011104.1 MGP_WSBEiJ_G0009261.1 mouse_genomes_project 11 49869778 49870033 + Gm25082 misc_RNA misc_RNA MGP_WSBEiJ_T0027733.1 MGP_WSBEiJ_G0017502.1 mouse_genomes_project 11 30098112 30181329 + MGP_WSBEiJ_P0027733 Sh3pxd2b protein_coding protein_coding MGP_WSBEiJ_T0027734.1 MGP_WSBEiJ_G0017502.1 mouse_genomes_project 11 30098132 30142464 + Sh3pxd2b protein_coding retained_intron MGP_WSBEiJ_T0006155.1 MGP_WSBEiJ_G0005143.1 mouse_genomes_project 11 59334241 59337253 - 4930412M03Rik lincRNA lincRNA MGP_WSBEiJ_T0012247.1 MGP_WSBEiJ_G0010377.1 mouse_genomes_project 11 15785668 15786914 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028677.1 MGP_WSBEiJ_G0017777.1 mouse_genomes_project 11 59636474 59652903 - MGP_WSBEiJ_P0028677 Atpaf2 protein_coding protein_coding MGP_WSBEiJ_T0028678.1 MGP_WSBEiJ_G0017777.1 mouse_genomes_project 11 59637325 59652870 - MGP_WSBEiJ_P0028678 Atpaf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028679.1 MGP_WSBEiJ_G0017777.1 mouse_genomes_project 11 59639684 59652894 - Atpaf2 protein_coding processed_transcript MGP_WSBEiJ_T0028680.1 MGP_WSBEiJ_G0017777.1 mouse_genomes_project 11 59641648 59652887 - Atpaf2 protein_coding processed_transcript MGP_WSBEiJ_T0028681.1 MGP_WSBEiJ_G0017777.1 mouse_genomes_project 11 59643227 59654307 - Atpaf2 protein_coding processed_transcript MGP_WSBEiJ_T0028682.1 MGP_WSBEiJ_G0017777.1 mouse_genomes_project 11 59645067 59652888 - Atpaf2 protein_coding retained_intron MGP_WSBEiJ_T0031300.1 MGP_WSBEiJ_G0018407.1 mouse_genomes_project 11 99571182 99578539 + MGP_WSBEiJ_P0031300 Rpl19 protein_coding protein_coding MGP_WSBEiJ_T0031301.1 MGP_WSBEiJ_G0018407.1 mouse_genomes_project 11 99575007 99576201 + Rpl19 protein_coding retained_intron MGP_WSBEiJ_T0030408.1 MGP_WSBEiJ_G0018179.1 mouse_genomes_project 11 81393889 82540360 - MGP_WSBEiJ_P0030408 Asic2 protein_coding protein_coding MGP_WSBEiJ_T0030409.1 MGP_WSBEiJ_G0018179.1 mouse_genomes_project 11 81393889 81678268 - MGP_WSBEiJ_P0030409 Asic2 protein_coding protein_coding MGP_WSBEiJ_T0028043.1 MGP_WSBEiJ_G0017602.1 mouse_genomes_project 11 48179249 48222640 - MGP_WSBEiJ_P0028043 Cnot6 protein_coding protein_coding MGP_WSBEiJ_T0028044.1 MGP_WSBEiJ_G0017602.1 mouse_genomes_project 11 48182444 48211245 - Cnot6 protein_coding processed_transcript MGP_WSBEiJ_T0028045.1 MGP_WSBEiJ_G0017602.1 mouse_genomes_project 11 48182459 48222627 - MGP_WSBEiJ_P0028045 Cnot6 protein_coding protein_coding MGP_WSBEiJ_T0028046.1 MGP_WSBEiJ_G0017602.1 mouse_genomes_project 11 48185126 48189208 - Cnot6 protein_coding processed_transcript MGP_WSBEiJ_T0028047.1 MGP_WSBEiJ_G0017602.1 mouse_genomes_project 11 48189959 48191532 - Cnot6 protein_coding processed_transcript MGP_WSBEiJ_T0029023.1 MGP_WSBEiJ_G0017854.1 mouse_genomes_project 11 67241725 67341487 - MGP_WSBEiJ_P0029023 Glp2r protein_coding protein_coding MGP_WSBEiJ_T0029026.1 MGP_WSBEiJ_G0017854.1 mouse_genomes_project 11 67287461 67357245 - MGP_WSBEiJ_P0029026 Glp2r protein_coding protein_coding MGP_WSBEiJ_T0029766.1 MGP_WSBEiJ_G0018016.1 mouse_genomes_project 11 73183887 73185406 - MGP_WSBEiJ_P0029766 Emc6 protein_coding protein_coding MGP_WSBEiJ_T0029767.1 MGP_WSBEiJ_G0018016.1 mouse_genomes_project 11 73184704 73185371 - MGP_WSBEiJ_P0029767 Emc6 protein_coding protein_coding MGP_WSBEiJ_T0029885.1 MGP_WSBEiJ_G0018063.1 mouse_genomes_project 11 75044710 75296609 + MGP_WSBEiJ_P0029885 Smg6 protein_coding protein_coding MGP_WSBEiJ_T0029886.1 MGP_WSBEiJ_G0018063.1 mouse_genomes_project 11 75049412 75296609 + MGP_WSBEiJ_P0029886 Smg6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029887.1 MGP_WSBEiJ_G0018063.1 mouse_genomes_project 11 75112241 75115087 + Smg6 protein_coding retained_intron MGP_WSBEiJ_T0029888.1 MGP_WSBEiJ_G0018063.1 mouse_genomes_project 11 75116733 75271855 + MGP_WSBEiJ_P0029888 Smg6 protein_coding protein_coding MGP_WSBEiJ_T0029889.1 MGP_WSBEiJ_G0018063.1 mouse_genomes_project 11 75263534 75271855 + Smg6 protein_coding processed_transcript MGP_WSBEiJ_T0029890.1 MGP_WSBEiJ_G0018063.1 mouse_genomes_project 11 75291792 75295342 + Smg6 protein_coding processed_transcript MGP_WSBEiJ_T0012238.1 MGP_WSBEiJ_G0010368.1 mouse_genomes_project 11 13671108 13672481 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009505.1 MGP_WSBEiJ_G0007662.1 mouse_genomes_project 11 3450171 3450224 - Gm22123 miRNA miRNA MGP_WSBEiJ_T0098941.1 MGP_WSBEiJ_G0037604.1 mouse_genomes_project 11 78503362 78503431 - Snord42b snoRNA snoRNA MGP_WSBEiJ_T0031509.1 MGP_WSBEiJ_G0018494.1 mouse_genomes_project 11 101897269 101900889 - MGP_WSBEiJ_P0031509 Krt36 protein_coding protein_coding MGP_WSBEiJ_T0030976.1 MGP_WSBEiJ_G0018323.1 mouse_genomes_project 11 95876213 95885179 - MGP_WSBEiJ_P0030976 Eme1 protein_coding protein_coding MGP_WSBEiJ_T0030977.1 MGP_WSBEiJ_G0018323.1 mouse_genomes_project 11 95878949 95881735 - Eme1 protein_coding processed_transcript MGP_WSBEiJ_T0030978.1 MGP_WSBEiJ_G0018323.1 mouse_genomes_project 11 95881098 95881910 - Eme1 protein_coding processed_transcript MGP_WSBEiJ_T0030979.1 MGP_WSBEiJ_G0018323.1 mouse_genomes_project 11 95881779 95884487 - Eme1 protein_coding processed_transcript MGP_WSBEiJ_T0003132.1 MGP_WSBEiJ_G0002912.1 mouse_genomes_project 11 63455597 63458201 + Gm12289 antisense antisense MGP_WSBEiJ_T0009618.1 MGP_WSBEiJ_G0007775.1 mouse_genomes_project 11 120058236 120058313 + Gm24323 miRNA miRNA MGP_WSBEiJ_T0003204.1 MGP_WSBEiJ_G0002967.1 mouse_genomes_project 11 98209555 98211023 + Gm11537 antisense antisense MGP_WSBEiJ_T0031128.1 MGP_WSBEiJ_G0018369.1 mouse_genomes_project 11 98210308 98220280 - MGP_WSBEiJ_P0031128 Snx11 protein_coding protein_coding MGP_WSBEiJ_T0031129.1 MGP_WSBEiJ_G0018369.1 mouse_genomes_project 11 98210630 98220308 - MGP_WSBEiJ_P0031129 Snx11 protein_coding protein_coding MGP_WSBEiJ_T0031130.1 MGP_WSBEiJ_G0018369.1 mouse_genomes_project 11 98212644 98220241 - MGP_WSBEiJ_P0031130 Snx11 protein_coding protein_coding MGP_WSBEiJ_T0031131.1 MGP_WSBEiJ_G0018369.1 mouse_genomes_project 11 98212851 98213804 - Snx11 protein_coding processed_transcript MGP_WSBEiJ_T0031132.1 MGP_WSBEiJ_G0018369.1 mouse_genomes_project 11 98215290 98217391 - Snx11 protein_coding processed_transcript MGP_WSBEiJ_T0031133.1 MGP_WSBEiJ_G0018369.1 mouse_genomes_project 11 98219048 98220269 - Snx11 protein_coding processed_transcript MGP_WSBEiJ_T0003174.1 MGP_WSBEiJ_G0002946.1 mouse_genomes_project 11 86481513 86498135 - Bcas3os1 antisense antisense MGP_WSBEiJ_T0003175.1 MGP_WSBEiJ_G0002946.1 mouse_genomes_project 11 86483184 86498135 - Bcas3os1 antisense antisense MGP_WSBEiJ_T0030707.1 MGP_WSBEiJ_G0018262.1 mouse_genomes_project 11 88068051 88206400 - MGP_WSBEiJ_P0030707 Ppm1e protein_coding protein_coding MGP_WSBEiJ_T0030708.1 MGP_WSBEiJ_G0018262.1 mouse_genomes_project 11 88084200 88206014 - Ppm1e protein_coding processed_transcript MGP_WSBEiJ_T0097704.1 MGP_WSBEiJ_G0036367.1 mouse_genomes_project 11 68967684 68967789 + Gm23194 snRNA snRNA MGP_WSBEiJ_T0030216.1 MGP_WSBEiJ_G0018132.1 mouse_genomes_project 11 78587312 78589594 + protein_coding processed_transcript MGP_WSBEiJ_T0030217.1 MGP_WSBEiJ_G0018132.1 mouse_genomes_project 11 78587322 78618428 + MGP_WSBEiJ_P0030217 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030218.1 MGP_WSBEiJ_G0018132.1 mouse_genomes_project 11 78588033 78589528 + protein_coding retained_intron MGP_WSBEiJ_T0030219.1 MGP_WSBEiJ_G0018132.1 mouse_genomes_project 11 78591695 78593723 + protein_coding retained_intron MGP_WSBEiJ_T0030220.1 MGP_WSBEiJ_G0018132.1 mouse_genomes_project 11 78598979 78600433 + protein_coding retained_intron MGP_WSBEiJ_T0030221.1 MGP_WSBEiJ_G0018132.1 mouse_genomes_project 11 78600159 78601896 + MGP_WSBEiJ_P0030221 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030222.1 MGP_WSBEiJ_G0018132.1 mouse_genomes_project 11 78612444 78616413 + protein_coding retained_intron MGP_WSBEiJ_T0030223.1 MGP_WSBEiJ_G0018132.1 mouse_genomes_project 11 78616369 78618155 + protein_coding retained_intron MGP_WSBEiJ_T0027328.1 MGP_WSBEiJ_G0017414.1 mouse_genomes_project 11 8571842 8599563 + protein_coding processed_transcript MGP_WSBEiJ_T0027329.1 MGP_WSBEiJ_G0017414.1 mouse_genomes_project 11 8573998 8630248 + MGP_WSBEiJ_P0027329 protein_coding protein_coding MGP_WSBEiJ_T0027330.1 MGP_WSBEiJ_G0017414.1 mouse_genomes_project 11 8600291 8630246 + MGP_WSBEiJ_P0027330 protein_coding protein_coding MGP_WSBEiJ_T0029492.1 MGP_WSBEiJ_G0017957.1 mouse_genomes_project 11 70265674 70267481 + MGP_WSBEiJ_P0029492 Med11 protein_coding protein_coding MGP_WSBEiJ_T0029493.1 MGP_WSBEiJ_G0017957.1 mouse_genomes_project 11 70265674 70266994 + MGP_WSBEiJ_P0029493 Med11 protein_coding protein_coding MGP_WSBEiJ_T0029494.1 MGP_WSBEiJ_G0017957.1 mouse_genomes_project 11 70265687 70267318 + Med11 protein_coding retained_intron MGP_WSBEiJ_T0029924.1 MGP_WSBEiJ_G0018073.1 mouse_genomes_project 11 75613402 75621322 + Tlcd2 protein_coding processed_transcript MGP_WSBEiJ_T0029925.1 MGP_WSBEiJ_G0018073.1 mouse_genomes_project 11 75619736 75623873 + MGP_WSBEiJ_P0029925 Tlcd2 protein_coding protein_coding MGP_WSBEiJ_T0029926.1 MGP_WSBEiJ_G0018073.1 mouse_genomes_project 11 75619736 75624115 + MGP_WSBEiJ_P0029926 Tlcd2 protein_coding protein_coding MGP_WSBEiJ_T0029927.1 MGP_WSBEiJ_G0018073.1 mouse_genomes_project 11 75620368 75621755 + Tlcd2 protein_coding retained_intron MGP_WSBEiJ_T0012361.1 MGP_WSBEiJ_G0010491.1 mouse_genomes_project 11 58669230 58669535 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011120.1 MGP_WSBEiJ_G0009277.1 mouse_genomes_project 11 107309037 107309133 + Gm24290 misc_RNA misc_RNA MGP_WSBEiJ_T0012232.1 MGP_WSBEiJ_G0010362.1 mouse_genomes_project 11 11724887 11725436 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028994.1 MGP_WSBEiJ_G0017846.1 mouse_genomes_project 11 66598252 66611851 + MGP_WSBEiJ_P0028994 Sco1 protein_coding protein_coding MGP_WSBEiJ_T0028995.1 MGP_WSBEiJ_G0017846.1 mouse_genomes_project 11 66598252 66612086 + MGP_WSBEiJ_P0028995 Sco1 protein_coding protein_coding MGP_WSBEiJ_T0028996.1 MGP_WSBEiJ_G0017846.1 mouse_genomes_project 11 66599350 66609652 + Sco1 protein_coding processed_transcript MGP_WSBEiJ_T0028997.1 MGP_WSBEiJ_G0017846.1 mouse_genomes_project 11 66603902 66613584 + Sco1 protein_coding processed_transcript MGP_WSBEiJ_T0003156.1 MGP_WSBEiJ_G0002931.1 mouse_genomes_project 11 78341153 78343807 - Dhrs13os antisense antisense MGP_WSBEiJ_T0006142.1 MGP_WSBEiJ_G0005131.1 mouse_genomes_project 11 44938342 44946779 - Gm4926 lincRNA lincRNA MGP_WSBEiJ_T0030472.1 MGP_WSBEiJ_G0018201.1 mouse_genomes_project 11 83832301 83852694 + MGP_WSBEiJ_P0030472 Slfn4 protein_coding protein_coding MGP_WSBEiJ_T0030473.1 MGP_WSBEiJ_G0018201.1 mouse_genomes_project 11 83832309 83852522 + MGP_WSBEiJ_P0030473 Slfn4 protein_coding protein_coding MGP_WSBEiJ_T0028122.1 MGP_WSBEiJ_G0017617.1 mouse_genomes_project 11 49137456 49351360 + MGP_WSBEiJ_P0028122 Adamts2 protein_coding protein_coding MGP_WSBEiJ_T0028123.1 MGP_WSBEiJ_G0017617.1 mouse_genomes_project 11 49317736 49318573 + Adamts2 protein_coding processed_transcript MGP_WSBEiJ_T0028124.1 MGP_WSBEiJ_G0017617.1 mouse_genomes_project 11 49323355 49324384 + Adamts2 protein_coding processed_transcript MGP_WSBEiJ_T0028125.1 MGP_WSBEiJ_G0017617.1 mouse_genomes_project 11 49336817 49339747 + Adamts2 protein_coding processed_transcript MGP_WSBEiJ_T0006282.1 MGP_WSBEiJ_G0005235.1 mouse_genomes_project 11 121864698 121867149 + Gm11750 lincRNA lincRNA MGP_WSBEiJ_T0031502.1 MGP_WSBEiJ_G0018489.1 mouse_genomes_project 11 101799787 101806134 - MGP_WSBEiJ_P0031502 Krt33a protein_coding protein_coding MGP_WSBEiJ_T0028685.1 MGP_WSBEiJ_G0017779.1 mouse_genomes_project 11 59694745 59702008 + Drg2 protein_coding retained_intron MGP_WSBEiJ_T0028686.1 MGP_WSBEiJ_G0017779.1 mouse_genomes_project 11 59694745 59708384 + MGP_WSBEiJ_P0028686 Drg2 protein_coding protein_coding MGP_WSBEiJ_T0028687.1 MGP_WSBEiJ_G0017779.1 mouse_genomes_project 11 59694778 59702806 + Drg2 protein_coding retained_intron MGP_WSBEiJ_T0028688.1 MGP_WSBEiJ_G0017779.1 mouse_genomes_project 11 59699584 59700490 + Drg2 protein_coding retained_intron MGP_WSBEiJ_T0028689.1 MGP_WSBEiJ_G0017779.1 mouse_genomes_project 11 59701661 59703201 + Drg2 protein_coding retained_intron MGP_WSBEiJ_T0027594.1 MGP_WSBEiJ_G0017473.1 mouse_genomes_project 11 26820605 26872689 + MGP_WSBEiJ_P0027594 Smek2 protein_coding protein_coding MGP_WSBEiJ_T0027595.1 MGP_WSBEiJ_G0017473.1 mouse_genomes_project 11 26820605 26860176 + MGP_WSBEiJ_P0027595 Smek2 protein_coding protein_coding MGP_WSBEiJ_T0027596.1 MGP_WSBEiJ_G0017473.1 mouse_genomes_project 11 26821982 26836961 + MGP_WSBEiJ_P0027596 Smek2 protein_coding protein_coding MGP_WSBEiJ_T0027597.1 MGP_WSBEiJ_G0017473.1 mouse_genomes_project 11 26845868 26850391 + Smek2 protein_coding processed_transcript MGP_WSBEiJ_T0027598.1 MGP_WSBEiJ_G0017473.1 mouse_genomes_project 11 26845879 26858588 + MGP_WSBEiJ_P0027598 Smek2 protein_coding protein_coding MGP_WSBEiJ_T0027599.1 MGP_WSBEiJ_G0017473.1 mouse_genomes_project 11 26854738 26870443 + Smek2 protein_coding processed_transcript MGP_WSBEiJ_T0027600.1 MGP_WSBEiJ_G0017473.1 mouse_genomes_project 11 26864152 26872689 + MGP_WSBEiJ_P0027600 Smek2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030590.1 MGP_WSBEiJ_G0018234.1 mouse_genomes_project 11 85612107 85615999 - MGP_WSBEiJ_P0030590 Pigw protein_coding protein_coding MGP_WSBEiJ_T0030591.1 MGP_WSBEiJ_G0018234.1 mouse_genomes_project 11 85612634 85616089 - MGP_WSBEiJ_P0030591 Pigw protein_coding protein_coding MGP_WSBEiJ_T0099996.1 MGP_WSBEiJ_G0038643.1 mouse_genomes_project 11 3667006 3679351 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099997.1 MGP_WSBEiJ_G0038643.1 mouse_genomes_project 11 3667232 3667698 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099998.1 MGP_WSBEiJ_G0038643.1 mouse_genomes_project 11 3668002 3677845 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0099999.1 MGP_WSBEiJ_G0038643.1 mouse_genomes_project 11 3668275 3679328 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0012365.1 MGP_WSBEiJ_G0010495.1 mouse_genomes_project 11 59687959 59688720 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030107.1 MGP_WSBEiJ_G0018112.1 mouse_genomes_project 11 77800972 77884765 - MGP_WSBEiJ_P0030107 Taok1 protein_coding protein_coding MGP_WSBEiJ_T0030108.1 MGP_WSBEiJ_G0018112.1 mouse_genomes_project 11 77800972 77860828 - MGP_WSBEiJ_P0030108 Taok1 protein_coding protein_coding MGP_WSBEiJ_T0030109.1 MGP_WSBEiJ_G0018112.1 mouse_genomes_project 11 77804787 77884884 - MGP_WSBEiJ_P0030109 Taok1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030110.1 MGP_WSBEiJ_G0018112.1 mouse_genomes_project 11 77804787 77884877 - MGP_WSBEiJ_P0030110 Taok1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009577.1 MGP_WSBEiJ_G0007734.1 mouse_genomes_project 11 86538876 86538963 - Mir5110 miRNA miRNA MGP_WSBEiJ_T0098897.1 MGP_WSBEiJ_G0037560.1 mouse_genomes_project 11 5052304 5052379 - Gm24051 snoRNA snoRNA MGP_WSBEiJ_T0032398.1 MGP_WSBEiJ_G0018687.1 mouse_genomes_project 11 111755840 111796938 + MGP_WSBEiJ_P0032398 Gna13 protein_coding protein_coding MGP_WSBEiJ_T0032399.1 MGP_WSBEiJ_G0018687.1 mouse_genomes_project 11 111755840 111775751 + MGP_WSBEiJ_P0032399 Gna13 protein_coding protein_coding MGP_WSBEiJ_T0029860.1 MGP_WSBEiJ_G0018059.1 mouse_genomes_project 11 74950450 74965235 + MGP_WSBEiJ_P0029860 Mnt protein_coding protein_coding MGP_WSBEiJ_T0029861.1 MGP_WSBEiJ_G0018059.1 mouse_genomes_project 11 74955846 74957244 + Mnt protein_coding retained_intron MGP_WSBEiJ_T0029862.1 MGP_WSBEiJ_G0018059.1 mouse_genomes_project 11 74956988 74963285 + MGP_WSBEiJ_P0029862 Mnt protein_coding protein_coding MGP_WSBEiJ_T0028035.1 MGP_WSBEiJ_G0017596.1 mouse_genomes_project 11 47924742 47960740 + MGP_WSBEiJ_P0028035 Olfr1386 protein_coding protein_coding MGP_WSBEiJ_T0028727.1 MGP_WSBEiJ_G0017789.1 mouse_genomes_project 11 60083939 60112528 + MGP_WSBEiJ_P0028727 Dhrs7b protein_coding protein_coding MGP_WSBEiJ_T0006145.1 MGP_WSBEiJ_G0005134.1 mouse_genomes_project 11 49786659 49817403 - lincRNA lincRNA MGP_WSBEiJ_T0006146.1 MGP_WSBEiJ_G0005134.1 mouse_genomes_project 11 49787077 49816511 - lincRNA lincRNA MGP_WSBEiJ_T0028036.1 MGP_WSBEiJ_G0017597.1 mouse_genomes_project 11 47957356 47960866 + MGP_WSBEiJ_P0028036 Olfr1385 protein_coding protein_coding MGP_WSBEiJ_T0012350.1 MGP_WSBEiJ_G0010480.1 mouse_genomes_project 11 54339614 54339784 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003195.1 MGP_WSBEiJ_G0002961.1 mouse_genomes_project 11 97064876 97078751 - Zfp652os antisense antisense MGP_WSBEiJ_T0028578.1 MGP_WSBEiJ_G0017758.1 mouse_genomes_project 11 58591994 58636214 - MGP_WSBEiJ_P0028578 Snap47 protein_coding protein_coding MGP_WSBEiJ_T0028579.1 MGP_WSBEiJ_G0017758.1 mouse_genomes_project 11 58592004 58636222 - MGP_WSBEiJ_P0028579 Snap47 protein_coding protein_coding MGP_WSBEiJ_T0028580.1 MGP_WSBEiJ_G0017758.1 mouse_genomes_project 11 58613598 58636214 - MGP_WSBEiJ_P0028580 Snap47 protein_coding protein_coding MGP_WSBEiJ_T0028581.1 MGP_WSBEiJ_G0017758.1 mouse_genomes_project 11 58613604 58636128 - MGP_WSBEiJ_P0028581 Snap47 protein_coding protein_coding MGP_WSBEiJ_T0028582.1 MGP_WSBEiJ_G0017758.1 mouse_genomes_project 11 58623691 58636214 - MGP_WSBEiJ_P0028582 Snap47 protein_coding protein_coding MGP_WSBEiJ_T0028583.1 MGP_WSBEiJ_G0017758.1 mouse_genomes_project 11 58623913 58632982 - MGP_WSBEiJ_P0028583 Snap47 protein_coding protein_coding MGP_WSBEiJ_T0028584.1 MGP_WSBEiJ_G0017758.1 mouse_genomes_project 11 58623945 58636131 - MGP_WSBEiJ_P0028584 Snap47 protein_coding protein_coding MGP_WSBEiJ_T0028585.1 MGP_WSBEiJ_G0017758.1 mouse_genomes_project 11 58624106 58637401 - MGP_WSBEiJ_P0028585 Snap47 protein_coding protein_coding MGP_WSBEiJ_T0027427.1 MGP_WSBEiJ_G0017437.1 mouse_genomes_project 11 17815656 17928247 + MGP_WSBEiJ_P0027427 Sertad2 protein_coding protein_coding MGP_WSBEiJ_T0027428.1 MGP_WSBEiJ_G0017437.1 mouse_genomes_project 11 17907270 17928247 + MGP_WSBEiJ_P0027428 Sertad2 protein_coding protein_coding MGP_WSBEiJ_T0027429.1 MGP_WSBEiJ_G0017437.1 mouse_genomes_project 11 17922378 17924289 + MGP_WSBEiJ_P0027429 Sertad2 protein_coding protein_coding MGP_WSBEiJ_T0012476.1 MGP_WSBEiJ_G0010606.1 mouse_genomes_project 11 106712814 106713104 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031118.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97883077 98200695 + MGP_WSBEiJ_P0031118 Skap1 protein_coding protein_coding MGP_WSBEiJ_T0031119.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97883077 98200884 + MGP_WSBEiJ_P0031119 Skap1 protein_coding protein_coding MGP_WSBEiJ_T0031120.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97883084 97912577 + MGP_WSBEiJ_P0031120 Skap1 protein_coding protein_coding MGP_WSBEiJ_T0031121.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97883108 98172507 + Skap1 protein_coding retained_intron MGP_WSBEiJ_T0031122.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97883111 98200695 + MGP_WSBEiJ_P0031122 Skap1 protein_coding protein_coding MGP_WSBEiJ_T0031123.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97883117 98002128 + MGP_WSBEiJ_P0031123 Skap1 protein_coding protein_coding MGP_WSBEiJ_T0031124.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97883165 98108785 + MGP_WSBEiJ_P0031124 Skap1 protein_coding protein_coding MGP_WSBEiJ_T0031125.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97902068 97912577 + Skap1 protein_coding processed_transcript MGP_WSBEiJ_T0031126.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 97908804 98140651 + Skap1 protein_coding retained_intron MGP_WSBEiJ_T0031127.1 MGP_WSBEiJ_G0018368.1 mouse_genomes_project 11 98144445 98149328 + Skap1 protein_coding retained_intron MGP_WSBEiJ_T0030452.1 MGP_WSBEiJ_G0018194.1 mouse_genomes_project 11 83516455 83526773 + MGP_WSBEiJ_P0030452 Fndc8 protein_coding protein_coding MGP_WSBEiJ_T0029283.1 MGP_WSBEiJ_G0017912.1 mouse_genomes_project 11 69446869 69458155 - MGP_WSBEiJ_P0029283 Tnfsf12 protein_coding protein_coding MGP_WSBEiJ_T0029284.1 MGP_WSBEiJ_G0017912.1 mouse_genomes_project 11 69447959 69457827 - MGP_WSBEiJ_P0029284 Tnfsf12 protein_coding protein_coding MGP_WSBEiJ_T0031163.1 MGP_WSBEiJ_G0018374.1 mouse_genomes_project 11 98387203 98388592 + Prr15l protein_coding processed_transcript MGP_WSBEiJ_T0031164.1 MGP_WSBEiJ_G0018374.1 mouse_genomes_project 11 98388401 98394640 + MGP_WSBEiJ_P0031164 Prr15l protein_coding protein_coding MGP_WSBEiJ_T0031165.1 MGP_WSBEiJ_G0018374.1 mouse_genomes_project 11 98388423 98396818 + MGP_WSBEiJ_P0031165 Prr15l protein_coding protein_coding MGP_WSBEiJ_T0031166.1 MGP_WSBEiJ_G0018374.1 mouse_genomes_project 11 98388493 98394635 + MGP_WSBEiJ_P0031166 Prr15l protein_coding protein_coding MGP_WSBEiJ_T0031167.1 MGP_WSBEiJ_G0018374.1 mouse_genomes_project 11 98390388 98394272 + MGP_WSBEiJ_P0031167 Prr15l protein_coding protein_coding MGP_WSBEiJ_T0097192.1 MGP_WSBEiJ_G0035873.1 mouse_genomes_project 11 119052516 119052643 - Gm26413 scaRNA scaRNA MGP_WSBEiJ_T0031481.1 MGP_WSBEiJ_G0018468.1 mouse_genomes_project 11 101380171 101381136 - MGP_WSBEiJ_P0031481 protein_coding protein_coding MGP_WSBEiJ_T0016586.1 MGP_WSBEiJ_G0014583.1 mouse_genomes_project 11 44073377 44107578 + F630206G17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0030791.1 MGP_WSBEiJ_G0018279.1 mouse_genomes_project 11 89004898 89022608 + MGP_WSBEiJ_P0030791 Vezf1 protein_coding protein_coding MGP_WSBEiJ_T0030792.1 MGP_WSBEiJ_G0018279.1 mouse_genomes_project 11 89005020 89022609 + MGP_WSBEiJ_P0030792 Vezf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030793.1 MGP_WSBEiJ_G0018279.1 mouse_genomes_project 11 89011483 89022608 + MGP_WSBEiJ_P0030793 Vezf1 protein_coding protein_coding MGP_WSBEiJ_T0027691.1 MGP_WSBEiJ_G0017495.1 mouse_genomes_project 11 29920061 29920797 + MGP_WSBEiJ_P0027691 protein_coding protein_coding MGP_WSBEiJ_T0031097.1 MGP_WSBEiJ_G0018358.1 mouse_genomes_project 11 97588957 97592089 + MGP_WSBEiJ_P0031097 Hoxb13 protein_coding protein_coding MGP_WSBEiJ_T0029797.1 MGP_WSBEiJ_G0018026.1 mouse_genomes_project 11 73477094 73482392 - MGP_WSBEiJ_P0029797 Olfr378 protein_coding protein_coding MGP_WSBEiJ_T0012309.1 MGP_WSBEiJ_G0010439.1 mouse_genomes_project 11 38498730 38499391 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031532.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102190470 102195967 - Jup protein_coding processed_transcript MGP_WSBEiJ_T0031533.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102192131 102221526 - MGP_WSBEiJ_P0031533 Jup protein_coding protein_coding MGP_WSBEiJ_T0031534.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102192571 102197376 - Jup protein_coding processed_transcript MGP_WSBEiJ_T0031535.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102195546 102221526 - MGP_WSBEiJ_P0031535 Jup protein_coding protein_coding MGP_WSBEiJ_T0031536.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102195607 102196559 - Jup protein_coding processed_transcript MGP_WSBEiJ_T0031537.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102204264 102206870 - Jup protein_coding processed_transcript MGP_WSBEiJ_T0031538.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102207092 102221540 - Jup protein_coding processed_transcript MGP_WSBEiJ_T0031539.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102207172 102210519 - Jup protein_coding processed_transcript MGP_WSBEiJ_T0031540.1 MGP_WSBEiJ_G0018506.1 mouse_genomes_project 11 102207181 102210548 - Jup protein_coding processed_transcript MGP_WSBEiJ_T0030286.1 MGP_WSBEiJ_G0018148.1 mouse_genomes_project 11 78901486 78910077 - MGP_WSBEiJ_P0030286 Tmem97 protein_coding protein_coding MGP_WSBEiJ_T0031717.1 MGP_WSBEiJ_G0018546.1 mouse_genomes_project 11 103170156 103178476 + Cntd1 protein_coding processed_transcript MGP_WSBEiJ_T0031718.1 MGP_WSBEiJ_G0018546.1 mouse_genomes_project 11 103170240 103180632 + MGP_WSBEiJ_P0031718 Cntd1 protein_coding protein_coding MGP_WSBEiJ_T0031719.1 MGP_WSBEiJ_G0018546.1 mouse_genomes_project 11 103177985 103188249 + Cntd1 protein_coding processed_transcript MGP_WSBEiJ_T0029541.1 MGP_WSBEiJ_G0017968.1 mouse_genomes_project 11 70467611 70470526 + MGP_WSBEiJ_P0029541 Gp1ba protein_coding protein_coding MGP_WSBEiJ_T0029542.1 MGP_WSBEiJ_G0017968.1 mouse_genomes_project 11 70467633 70470310 + MGP_WSBEiJ_P0029542 Gp1ba protein_coding protein_coding MGP_WSBEiJ_T0098889.1 MGP_WSBEiJ_G0037552.1 mouse_genomes_project 11 295287 295404 - Gm24439 snoRNA snoRNA MGP_WSBEiJ_T0027981.1 MGP_WSBEiJ_G0017578.1 mouse_genomes_project 11 47421046 47436583 - MGP_WSBEiJ_P0027981 protein_coding protein_coding MGP_WSBEiJ_T0003281.1 MGP_WSBEiJ_G0003029.1 mouse_genomes_project 11 120913287 120932466 + Gm11725 antisense antisense MGP_WSBEiJ_T0031715.1 MGP_WSBEiJ_G0018545.1 mouse_genomes_project 11 103169112 103170259 - MGP_WSBEiJ_P0031715 Coa3 protein_coding protein_coding MGP_WSBEiJ_T0031716.1 MGP_WSBEiJ_G0018545.1 mouse_genomes_project 11 103169482 103170088 - MGP_WSBEiJ_P0031716 Coa3 protein_coding protein_coding MGP_WSBEiJ_T0012426.1 MGP_WSBEiJ_G0010556.1 mouse_genomes_project 11 83599299 83600130 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097267.1 MGP_WSBEiJ_G0035947.1 mouse_genomes_project 11 70711415 70720531 + Gm19967 sense_intronic sense_intronic MGP_WSBEiJ_T0028157.1 MGP_WSBEiJ_G0017628.1 mouse_genomes_project 11 49853008 49862307 - MGP_WSBEiJ_P0028157 BC049762 protein_coding protein_coding MGP_WSBEiJ_T0028158.1 MGP_WSBEiJ_G0017628.1 mouse_genomes_project 11 49853008 49862402 - MGP_WSBEiJ_P0028158 BC049762 protein_coding protein_coding MGP_WSBEiJ_T0009532.1 MGP_WSBEiJ_G0007689.1 mouse_genomes_project 11 52506352 52506410 - Mir7671 miRNA miRNA MGP_WSBEiJ_T0028321.1 MGP_WSBEiJ_G0017669.1 mouse_genomes_project 11 52539779 52554868 - Gm12216 protein_coding processed_transcript MGP_WSBEiJ_T0028322.1 MGP_WSBEiJ_G0017669.1 mouse_genomes_project 11 52540652 52623543 - Gm12216 protein_coding processed_transcript MGP_WSBEiJ_T0028323.1 MGP_WSBEiJ_G0017669.1 mouse_genomes_project 11 52541832 52623655 - MGP_WSBEiJ_P0028323 Gm12216 protein_coding protein_coding MGP_WSBEiJ_T0028324.1 MGP_WSBEiJ_G0017669.1 mouse_genomes_project 11 52562650 52623628 - Gm12216 protein_coding processed_transcript MGP_WSBEiJ_T0028325.1 MGP_WSBEiJ_G0017669.1 mouse_genomes_project 11 52570006 52623655 - MGP_WSBEiJ_P0028325 Gm12216 protein_coding protein_coding MGP_WSBEiJ_T0028326.1 MGP_WSBEiJ_G0017669.1 mouse_genomes_project 11 52573708 52623655 - MGP_WSBEiJ_P0028326 Gm12216 protein_coding protein_coding MGP_WSBEiJ_T0030211.1 MGP_WSBEiJ_G0018130.1 mouse_genomes_project 11 78529982 78546623 - Supt6 protein_coding retained_intron MGP_WSBEiJ_T0030212.1 MGP_WSBEiJ_G0018130.1 mouse_genomes_project 11 78530537 78568484 - MGP_WSBEiJ_P0030212 Supt6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0027888.1 MGP_WSBEiJ_G0017549.1 mouse_genomes_project 11 42718892 42766856 + MGP_WSBEiJ_P0027888 Rnf145 protein_coding protein_coding MGP_WSBEiJ_T0027889.1 MGP_WSBEiJ_G0017549.1 mouse_genomes_project 11 42718911 42725675 + Rnf145 protein_coding processed_transcript MGP_WSBEiJ_T0027890.1 MGP_WSBEiJ_G0017549.1 mouse_genomes_project 11 42720758 42756291 + MGP_WSBEiJ_P0027890 Rnf145 protein_coding protein_coding MGP_WSBEiJ_T0027891.1 MGP_WSBEiJ_G0017549.1 mouse_genomes_project 11 42721621 42750239 + Rnf145 protein_coding processed_transcript MGP_WSBEiJ_T0027892.1 MGP_WSBEiJ_G0017549.1 mouse_genomes_project 11 42758144 42761351 + Rnf145 protein_coding processed_transcript MGP_WSBEiJ_T0027893.1 MGP_WSBEiJ_G0017549.1 mouse_genomes_project 11 42761332 42763291 + Rnf145 protein_coding processed_transcript MGP_WSBEiJ_T0097671.1 MGP_WSBEiJ_G0036334.1 mouse_genomes_project 11 492574 492703 - Gm26393 snRNA snRNA MGP_WSBEiJ_T0030490.1 MGP_WSBEiJ_G0018206.1 mouse_genomes_project 11 84078126 84087805 + MGP_WSBEiJ_P0030490 Rasl10b protein_coding protein_coding MGP_WSBEiJ_T0030491.1 MGP_WSBEiJ_G0018206.1 mouse_genomes_project 11 84078664 84090011 + MGP_WSBEiJ_P0030491 Rasl10b protein_coding protein_coding MGP_WSBEiJ_T0030492.1 MGP_WSBEiJ_G0018206.1 mouse_genomes_project 11 84078664 84090009 + MGP_WSBEiJ_P0030492 Rasl10b protein_coding protein_coding MGP_WSBEiJ_T0030493.1 MGP_WSBEiJ_G0018206.1 mouse_genomes_project 11 84079048 84090010 + MGP_WSBEiJ_P0030493 Rasl10b protein_coding protein_coding MGP_WSBEiJ_T0032191.1 MGP_WSBEiJ_G0018640.1 mouse_genomes_project 11 107545489 107637834 - MGP_WSBEiJ_P0032191 March10 protein_coding protein_coding MGP_WSBEiJ_T0032192.1 MGP_WSBEiJ_G0018640.1 mouse_genomes_project 11 107548434 107556147 - March10 protein_coding processed_transcript MGP_WSBEiJ_T0032193.1 MGP_WSBEiJ_G0018640.1 mouse_genomes_project 11 107581996 107595389 - MGP_WSBEiJ_P0032193 March10 protein_coding protein_coding MGP_WSBEiJ_T0032194.1 MGP_WSBEiJ_G0018640.1 mouse_genomes_project 11 107586960 107640181 - MGP_WSBEiJ_P0032194 March10 protein_coding protein_coding MGP_WSBEiJ_T0031093.1 MGP_WSBEiJ_G0018356.1 mouse_genomes_project 11 97488752 97500976 - MGP_WSBEiJ_P0031093 Calcoco2 protein_coding protein_coding MGP_WSBEiJ_T0031094.1 MGP_WSBEiJ_G0018356.1 mouse_genomes_project 11 97489288 97500974 - MGP_WSBEiJ_P0031094 Calcoco2 protein_coding protein_coding MGP_WSBEiJ_T0097712.1 MGP_WSBEiJ_G0036375.1 mouse_genomes_project 11 79197662 79197749 + Gm23219 snRNA snRNA MGP_WSBEiJ_T0029304.1 MGP_WSBEiJ_G0017919.1 mouse_genomes_project 11 69587670 69589570 - MGP_WSBEiJ_P0029304 4933402P03Rik protein_coding protein_coding MGP_WSBEiJ_T0026965.1 MGP_WSBEiJ_G0017329.1 mouse_genomes_project 11 317775 328166 - MGP_WSBEiJ_P0026965 protein_coding non_stop_decay MGP_WSBEiJ_T0026966.1 MGP_WSBEiJ_G0017329.1 mouse_genomes_project 11 317775 325526 - MGP_WSBEiJ_P0026966 protein_coding protein_coding MGP_WSBEiJ_T0026967.1 MGP_WSBEiJ_G0017329.1 mouse_genomes_project 11 317775 328163 - MGP_WSBEiJ_P0026967 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026968.1 MGP_WSBEiJ_G0017329.1 mouse_genomes_project 11 317940 328178 - MGP_WSBEiJ_P0026968 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0026969.1 MGP_WSBEiJ_G0017329.1 mouse_genomes_project 11 318053 328895 - MGP_WSBEiJ_P0026969 protein_coding unknown_likely_coding MGP_WSBEiJ_T0026970.1 MGP_WSBEiJ_G0017329.1 mouse_genomes_project 11 322345 328191 - MGP_WSBEiJ_P0026970 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100486.1 MGP_WSBEiJ_G0038945.1 mouse_genomes_project 11 84372308 84373155 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0028440.1 MGP_WSBEiJ_G0017698.1 mouse_genomes_project 11 54939903 54955929 - MGP_WSBEiJ_P0028440 Nmur2 protein_coding protein_coding MGP_WSBEiJ_T0028332.1 MGP_WSBEiJ_G0017673.1 mouse_genomes_project 11 52777354 52824386 - MGP_WSBEiJ_P0028332 Slc22a4 protein_coding protein_coding MGP_WSBEiJ_T0028333.1 MGP_WSBEiJ_G0017673.1 mouse_genomes_project 11 52786292 52802252 - Slc22a4 protein_coding processed_transcript MGP_WSBEiJ_T0028334.1 MGP_WSBEiJ_G0017673.1 mouse_genomes_project 11 52808423 52824248 - Slc22a4 protein_coding processed_transcript MGP_WSBEiJ_T0016693.1 MGP_WSBEiJ_G0014641.1 mouse_genomes_project 11 123351925 123357610 - 2810410L24Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016694.1 MGP_WSBEiJ_G0014641.1 mouse_genomes_project 11 123356564 123358711 - 2810410L24Rik processed_transcript processed_transcript MGP_WSBEiJ_T0012481.1 MGP_WSBEiJ_G0010611.1 mouse_genomes_project 11 107334229 107336074 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030198.1 MGP_WSBEiJ_G0018127.1 mouse_genomes_project 11 78501240 78503384 - Rpl23a-ps3 protein_coding retained_intron MGP_WSBEiJ_T0030199.1 MGP_WSBEiJ_G0018127.1 mouse_genomes_project 11 78501243 78501939 - Rpl23a-ps3 protein_coding retained_intron MGP_WSBEiJ_T0030200.1 MGP_WSBEiJ_G0018127.1 mouse_genomes_project 11 78501243 78503891 - MGP_WSBEiJ_P0030200 Rpl23a-ps3 protein_coding protein_coding MGP_WSBEiJ_T0029953.1 MGP_WSBEiJ_G0018079.1 mouse_genomes_project 11 75801841 75821778 + MGP_WSBEiJ_P0029953 Inpp5k protein_coding protein_coding MGP_WSBEiJ_T0029954.1 MGP_WSBEiJ_G0018079.1 mouse_genomes_project 11 75801882 75821770 + Inpp5k protein_coding retained_intron MGP_WSBEiJ_T0029955.1 MGP_WSBEiJ_G0018079.1 mouse_genomes_project 11 75801890 75806123 + Inpp5k protein_coding retained_intron MGP_WSBEiJ_T0029956.1 MGP_WSBEiJ_G0018079.1 mouse_genomes_project 11 75801908 75821772 + MGP_WSBEiJ_P0029956 Inpp5k protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029957.1 MGP_WSBEiJ_G0018079.1 mouse_genomes_project 11 75809501 75820183 + Inpp5k protein_coding retained_intron MGP_WSBEiJ_T0029958.1 MGP_WSBEiJ_G0018079.1 mouse_genomes_project 11 75819692 75820638 + Inpp5k protein_coding processed_transcript MGP_WSBEiJ_T0029959.1 MGP_WSBEiJ_G0018079.1 mouse_genomes_project 11 75819752 75820771 + MGP_WSBEiJ_P0029959 Inpp5k protein_coding protein_coding MGP_WSBEiJ_T0003179.1 MGP_WSBEiJ_G0002949.1 mouse_genomes_project 11 87958556 87963892 - Gm11491 antisense antisense MGP_WSBEiJ_T0003180.1 MGP_WSBEiJ_G0002949.1 mouse_genomes_project 11 87958774 87963945 - Gm11491 antisense antisense MGP_WSBEiJ_T0030427.1 MGP_WSBEiJ_G0018189.1 mouse_genomes_project 11 83332492 83380328 - MGP_WSBEiJ_P0030427 Cct6b protein_coding protein_coding MGP_WSBEiJ_T0030428.1 MGP_WSBEiJ_G0018189.1 mouse_genomes_project 11 83332492 83380313 - MGP_WSBEiJ_P0030428 Cct6b protein_coding protein_coding MGP_WSBEiJ_T0029751.1 MGP_WSBEiJ_G0018010.1 mouse_genomes_project 11 72998853 73015836 + MGP_WSBEiJ_P0029751 P2rx1 protein_coding protein_coding MGP_WSBEiJ_T0029752.1 MGP_WSBEiJ_G0018010.1 mouse_genomes_project 11 72999064 73014762 + MGP_WSBEiJ_P0029752 P2rx1 protein_coding protein_coding MGP_WSBEiJ_T0029753.1 MGP_WSBEiJ_G0018010.1 mouse_genomes_project 11 73010441 73015833 + P2rx1 protein_coding retained_intron MGP_WSBEiJ_T0032863.1 MGP_WSBEiJ_G0018783.1 mouse_genomes_project 11 119338774 119344702 + MGP_WSBEiJ_P0032863 protein_coding protein_coding MGP_WSBEiJ_T0100481.1 MGP_WSBEiJ_G0038940.1 mouse_genomes_project 11 74171377 74177850 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006143.1 MGP_WSBEiJ_G0005132.1 mouse_genomes_project 11 48769662 48822158 + Gm26542 lincRNA lincRNA MGP_WSBEiJ_T0098935.1 MGP_WSBEiJ_G0037598.1 mouse_genomes_project 11 75022628 75022719 + Gm22771 snoRNA snoRNA MGP_WSBEiJ_T0032435.1 MGP_WSBEiJ_G0018696.1 mouse_genomes_project 11 112361597 112430103 - MGP_WSBEiJ_P0032435 Abca8b protein_coding protein_coding MGP_WSBEiJ_T0032436.1 MGP_WSBEiJ_G0018696.1 mouse_genomes_project 11 112363680 112430001 - MGP_WSBEiJ_P0032436 Abca8b protein_coding protein_coding MGP_WSBEiJ_T0006086.1 MGP_WSBEiJ_G0005082.1 mouse_genomes_project 11 15803631 15908251 - Gm12023 lincRNA lincRNA MGP_WSBEiJ_T0027731.1 MGP_WSBEiJ_G0017501.1 mouse_genomes_project 11 30017037 30018752 + MGP_WSBEiJ_P0027731 Hba-x protein_coding protein_coding MGP_WSBEiJ_T0027732.1 MGP_WSBEiJ_G0017501.1 mouse_genomes_project 11 30017530 30018752 + MGP_WSBEiJ_P0027732 Hba-x protein_coding protein_coding MGP_WSBEiJ_T0012497.1 MGP_WSBEiJ_G0010627.1 mouse_genomes_project 11 117416270 117416572 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031496.1 MGP_WSBEiJ_G0018483.1 mouse_genomes_project 11 101695119 101702713 + MGP_WSBEiJ_P0031496 Krtap31-2 protein_coding protein_coding MGP_WSBEiJ_T0003064.1 MGP_WSBEiJ_G0002851.1 mouse_genomes_project 11 25989972 25993925 + Gm12081 antisense antisense MGP_WSBEiJ_T0016608.1 MGP_WSBEiJ_G0014596.1 mouse_genomes_project 11 67509144 67537805 + 9130017K11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016609.1 MGP_WSBEiJ_G0014596.1 mouse_genomes_project 11 67510016 67511436 + 9130017K11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0032651.1 MGP_WSBEiJ_G0018748.1 mouse_genomes_project 11 118353684 118368375 - MGP_WSBEiJ_P0032651 Sumo2 protein_coding protein_coding MGP_WSBEiJ_T0032652.1 MGP_WSBEiJ_G0018748.1 mouse_genomes_project 11 118362230 118368275 - Sumo2 protein_coding retained_intron MGP_WSBEiJ_T0032653.1 MGP_WSBEiJ_G0018748.1 mouse_genomes_project 11 118366476 118368288 - Sumo2 protein_coding retained_intron MGP_WSBEiJ_T0032125.1 MGP_WSBEiJ_G0018627.1 mouse_genomes_project 11 106304392 106306626 + MGP_WSBEiJ_P0032125 Sppl2c protein_coding protein_coding MGP_WSBEiJ_T0032126.1 MGP_WSBEiJ_G0018627.1 mouse_genomes_project 11 106304392 106309172 + MGP_WSBEiJ_P0032126 Sppl2c protein_coding protein_coding MGP_WSBEiJ_T0016691.1 MGP_WSBEiJ_G0014639.1 mouse_genomes_project 11 122687084 122709872 + Gm11762 processed_transcript processed_transcript MGP_WSBEiJ_T0012273.1 MGP_WSBEiJ_G0010403.1 mouse_genomes_project 11 24340110 24353971 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029506.1 MGP_WSBEiJ_G0017961.1 mouse_genomes_project 11 70330359 70331460 - MGP_WSBEiJ_P0029506 Vmo1 protein_coding protein_coding MGP_WSBEiJ_T0006245.1 MGP_WSBEiJ_G0005207.1 mouse_genomes_project 11 104644431 104646086 - Gm11636 lincRNA lincRNA MGP_WSBEiJ_T0003087.1 MGP_WSBEiJ_G0002874.1 mouse_genomes_project 11 50924163 50934309 + A630014C17Rik antisense antisense MGP_WSBEiJ_T0030344.1 MGP_WSBEiJ_G0018165.1 mouse_genomes_project 11 80493358 80528431 - MGP_WSBEiJ_P0030344 Crlf3 protein_coding protein_coding MGP_WSBEiJ_T0030345.1 MGP_WSBEiJ_G0018165.1 mouse_genomes_project 11 80494349 80528448 - MGP_WSBEiJ_P0030345 Crlf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030346.1 MGP_WSBEiJ_G0018165.1 mouse_genomes_project 11 80494349 80528431 - MGP_WSBEiJ_P0030346 Crlf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030347.1 MGP_WSBEiJ_G0018165.1 mouse_genomes_project 11 80502951 80528455 - Crlf3 protein_coding processed_transcript MGP_WSBEiJ_T0030348.1 MGP_WSBEiJ_G0018165.1 mouse_genomes_project 11 80503073 80504756 - Crlf3 protein_coding retained_intron MGP_WSBEiJ_T0030349.1 MGP_WSBEiJ_G0018165.1 mouse_genomes_project 11 80506168 80528380 - MGP_WSBEiJ_P0030349 Crlf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030350.1 MGP_WSBEiJ_G0018165.1 mouse_genomes_project 11 80509569 80528457 - Crlf3 protein_coding retained_intron MGP_WSBEiJ_T0029892.1 MGP_WSBEiJ_G0018065.1 mouse_genomes_project 11 75308053 75310947 - MGP_WSBEiJ_P0029892 Ovca2 protein_coding protein_coding MGP_WSBEiJ_T0029895.1 MGP_WSBEiJ_G0018065.1 mouse_genomes_project 11 75309912 75310899 - Ovca2 protein_coding processed_transcript MGP_WSBEiJ_T0097729.1 MGP_WSBEiJ_G0036392.1 mouse_genomes_project 11 97310088 97310251 + Gm24725 snRNA snRNA MGP_WSBEiJ_T0029061.1 MGP_WSBEiJ_G0017864.1 mouse_genomes_project 11 68182821 68184881 + MGP_WSBEiJ_P0029061 Mfsd6l protein_coding protein_coding MGP_WSBEiJ_T0009541.1 MGP_WSBEiJ_G0007698.1 mouse_genomes_project 11 64054509 64054655 - Gm24275 miRNA miRNA MGP_WSBEiJ_T0029190.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69080138 69085474 - Chd3 protein_coding retained_intron MGP_WSBEiJ_T0029191.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69080138 69082883 - Chd3 protein_coding retained_intron MGP_WSBEiJ_T0029192.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69081213 69108558 - MGP_WSBEiJ_P0029192 Chd3 protein_coding protein_coding MGP_WSBEiJ_T0029193.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69081213 69108573 - MGP_WSBEiJ_P0029193 Chd3 protein_coding protein_coding MGP_WSBEiJ_T0029194.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69081998 69103961 - MGP_WSBEiJ_P0029194 Chd3 protein_coding protein_coding MGP_WSBEiJ_T0029195.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69082999 69083998 - Chd3 protein_coding retained_intron MGP_WSBEiJ_T0029196.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69091743 69092341 - Chd3 protein_coding retained_intron MGP_WSBEiJ_T0029197.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69092336 69095771 - MGP_WSBEiJ_P0029197 Chd3 protein_coding protein_coding MGP_WSBEiJ_T0029198.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69099887 69100902 - MGP_WSBEiJ_P0029198 Chd3 protein_coding protein_coding MGP_WSBEiJ_T0029199.1 MGP_WSBEiJ_G0017891.1 mouse_genomes_project 11 69099904 69100902 - MGP_WSBEiJ_P0029199 Chd3 protein_coding protein_coding MGP_WSBEiJ_T0030577.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85567072 85606104 - MGP_WSBEiJ_P0030577 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030578.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85567072 85606053 - MGP_WSBEiJ_P0030578 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030579.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85567072 85606132 - MGP_WSBEiJ_P0030579 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030580.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85567517 85605533 - MGP_WSBEiJ_P0030580 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030581.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85567572 85605961 - MGP_WSBEiJ_P0030581 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030582.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85567683 85606055 - MGP_WSBEiJ_P0030582 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030583.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85568882 85571256 - MGP_WSBEiJ_P0030583 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030584.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85569258 85606040 - MGP_WSBEiJ_P0030584 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030585.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85571208 85572773 - Ggnbp2 protein_coding processed_transcript MGP_WSBEiJ_T0030586.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85586555 85593705 - Ggnbp2 protein_coding processed_transcript MGP_WSBEiJ_T0030587.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85588143 85595901 - Ggnbp2 protein_coding retained_intron MGP_WSBEiJ_T0030588.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85595960 85605806 - MGP_WSBEiJ_P0030588 Ggnbp2 protein_coding protein_coding MGP_WSBEiJ_T0030589.1 MGP_WSBEiJ_G0018233.1 mouse_genomes_project 11 85604210 85606094 - Ggnbp2 protein_coding processed_transcript MGP_WSBEiJ_T0003143.1 MGP_WSBEiJ_G0002920.1 mouse_genomes_project 11 68738985 68741670 - 9330160F10Rik antisense antisense MGP_WSBEiJ_T0012303.1 MGP_WSBEiJ_G0010433.1 mouse_genomes_project 11 31241268 31241782 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006286.1 MGP_WSBEiJ_G0005239.1 mouse_genomes_project 11 122245307 122250642 + Gm26888 lincRNA lincRNA MGP_WSBEiJ_T0031473.1 MGP_WSBEiJ_G0018460.1 mouse_genomes_project 11 101323918 101324511 - MGP_WSBEiJ_P0031473 Krtap1-4 protein_coding protein_coding MGP_WSBEiJ_T0030008.1 MGP_WSBEiJ_G0018090.1 mouse_genomes_project 11 76418546 76425300 - MGP_WSBEiJ_P0030008 Gemin4 protein_coding protein_coding MGP_WSBEiJ_T0030009.1 MGP_WSBEiJ_G0018090.1 mouse_genomes_project 11 76424714 76425153 - MGP_WSBEiJ_P0030009 Gemin4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030703.1 MGP_WSBEiJ_G0018261.1 mouse_genomes_project 11 87964063 88061841 + MGP_WSBEiJ_P0030703 Trim37 protein_coding protein_coding MGP_WSBEiJ_T0030704.1 MGP_WSBEiJ_G0018261.1 mouse_genomes_project 11 87964291 87989684 + MGP_WSBEiJ_P0030704 Trim37 protein_coding protein_coding MGP_WSBEiJ_T0030705.1 MGP_WSBEiJ_G0018261.1 mouse_genomes_project 11 88026691 88049768 + Trim37 protein_coding retained_intron MGP_WSBEiJ_T0030706.1 MGP_WSBEiJ_G0018261.1 mouse_genomes_project 11 88031087 88059416 + MGP_WSBEiJ_P0030706 Trim37 protein_coding protein_coding MGP_WSBEiJ_T0032918.1 MGP_WSBEiJ_G0018793.1 mouse_genomes_project 11 119601069 119621897 - MGP_WSBEiJ_P0032918 St6galnac2 protein_coding protein_coding MGP_WSBEiJ_T0032919.1 MGP_WSBEiJ_G0018793.1 mouse_genomes_project 11 119601656 119605448 - St6galnac2 protein_coding processed_transcript MGP_WSBEiJ_T0032920.1 MGP_WSBEiJ_G0018793.1 mouse_genomes_project 11 119603250 119607060 - St6galnac2 protein_coding processed_transcript MGP_WSBEiJ_T0032921.1 MGP_WSBEiJ_G0018793.1 mouse_genomes_project 11 119607457 119610590 - St6galnac2 protein_coding processed_transcript MGP_WSBEiJ_T0032922.1 MGP_WSBEiJ_G0018793.1 mouse_genomes_project 11 119610689 119611691 - St6galnac2 protein_coding processed_transcript MGP_WSBEiJ_T0032923.1 MGP_WSBEiJ_G0018793.1 mouse_genomes_project 11 119615721 119621638 - St6galnac2 protein_coding processed_transcript MGP_WSBEiJ_T0029246.1 MGP_WSBEiJ_G0017905.1 mouse_genomes_project 11 69414615 69416029 + MGP_WSBEiJ_P0029246 Sox15 protein_coding protein_coding MGP_WSBEiJ_T0027990.1 MGP_WSBEiJ_G0017583.1 mouse_genomes_project 11 47518709 47527349 + Ifi47 protein_coding processed_transcript MGP_WSBEiJ_T0027992.1 MGP_WSBEiJ_G0017583.1 mouse_genomes_project 11 47519048 47528885 + MGP_WSBEiJ_P0027992 Ifi47 protein_coding protein_coding MGP_WSBEiJ_T0031223.1 MGP_WSBEiJ_G0018389.1 mouse_genomes_project 11 98904605 98999582 + MGP_WSBEiJ_P0031223 Arhgap23 protein_coding protein_coding MGP_WSBEiJ_T0031224.1 MGP_WSBEiJ_G0018389.1 mouse_genomes_project 11 98904677 98988229 + MGP_WSBEiJ_P0031224 Arhgap23 protein_coding unknown_likely_coding MGP_WSBEiJ_T0031225.1 MGP_WSBEiJ_G0018389.1 mouse_genomes_project 11 98929616 98937557 + Arhgap23 protein_coding processed_transcript MGP_WSBEiJ_T0031226.1 MGP_WSBEiJ_G0018389.1 mouse_genomes_project 11 98943500 98999580 + MGP_WSBEiJ_P0031226 Arhgap23 protein_coding protein_coding MGP_WSBEiJ_T0031227.1 MGP_WSBEiJ_G0018389.1 mouse_genomes_project 11 98945496 98999582 + MGP_WSBEiJ_P0031227 Arhgap23 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031229.1 MGP_WSBEiJ_G0018389.1 mouse_genomes_project 11 98987707 98999578 + MGP_WSBEiJ_P0031229 Arhgap23 protein_coding protein_coding MGP_WSBEiJ_T0030168.1 MGP_WSBEiJ_G0018121.1 mouse_genomes_project 11 78349076 78372395 + MGP_WSBEiJ_P0030168 Flot2 protein_coding protein_coding MGP_WSBEiJ_T0030169.1 MGP_WSBEiJ_G0018121.1 mouse_genomes_project 11 78349076 78372395 + MGP_WSBEiJ_P0030169 Flot2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030170.1 MGP_WSBEiJ_G0018121.1 mouse_genomes_project 11 78349129 78372395 + MGP_WSBEiJ_P0030170 Flot2 protein_coding protein_coding MGP_WSBEiJ_T0030171.1 MGP_WSBEiJ_G0018121.1 mouse_genomes_project 11 78349209 78372400 + MGP_WSBEiJ_P0030171 Flot2 protein_coding protein_coding MGP_WSBEiJ_T0030172.1 MGP_WSBEiJ_G0018121.1 mouse_genomes_project 11 78351455 78372395 + Flot2 protein_coding processed_transcript MGP_WSBEiJ_T0006281.1 MGP_WSBEiJ_G0005234.1 mouse_genomes_project 11 120541908 120550514 + Gm11734 lincRNA lincRNA MGP_WSBEiJ_T0003300.1 MGP_WSBEiJ_G0003044.1 mouse_genomes_project 11 125055173 125055831 - Gm15643 antisense antisense MGP_WSBEiJ_T0029777.1 MGP_WSBEiJ_G0018019.1 mouse_genomes_project 11 73213281 73239273 + MGP_WSBEiJ_P0029777 Shpk protein_coding protein_coding MGP_WSBEiJ_T0029778.1 MGP_WSBEiJ_G0018019.1 mouse_genomes_project 11 73213281 73239264 + MGP_WSBEiJ_P0029778 Shpk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028754.1 MGP_WSBEiJ_G0017796.1 mouse_genomes_project 11 60482137 60486896 + MGP_WSBEiJ_P0028754 Aldh3a1 protein_coding protein_coding MGP_WSBEiJ_T0028755.1 MGP_WSBEiJ_G0017796.1 mouse_genomes_project 11 60483221 60492990 + MGP_WSBEiJ_P0028755 Aldh3a1 protein_coding protein_coding MGP_WSBEiJ_T0028756.1 MGP_WSBEiJ_G0017796.1 mouse_genomes_project 11 60483345 60492990 + MGP_WSBEiJ_P0028756 Aldh3a1 protein_coding protein_coding MGP_WSBEiJ_T0032789.1 MGP_WSBEiJ_G0018769.1 mouse_genomes_project 11 118955675 118967671 - MGP_WSBEiJ_P0032789 Wbp2 protein_coding protein_coding MGP_WSBEiJ_T0032790.1 MGP_WSBEiJ_G0018769.1 mouse_genomes_project 11 118956354 118967671 - MGP_WSBEiJ_P0032790 Wbp2 protein_coding protein_coding MGP_WSBEiJ_T0032791.1 MGP_WSBEiJ_G0018769.1 mouse_genomes_project 11 118956499 118958618 - Wbp2 protein_coding processed_transcript MGP_WSBEiJ_T0032792.1 MGP_WSBEiJ_G0018769.1 mouse_genomes_project 11 118958961 118967671 - Wbp2 protein_coding processed_transcript MGP_WSBEiJ_T0032793.1 MGP_WSBEiJ_G0018769.1 mouse_genomes_project 11 118962118 118967648 - Wbp2 protein_coding processed_transcript MGP_WSBEiJ_T0029456.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70032766 70035376 - MGP_WSBEiJ_P0029456 0610010K14Rik protein_coding protein_coding MGP_WSBEiJ_T0029458.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70032774 70035486 - MGP_WSBEiJ_P0029458 0610010K14Rik protein_coding protein_coding MGP_WSBEiJ_T0029459.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70032774 70035425 - MGP_WSBEiJ_P0029459 0610010K14Rik protein_coding protein_coding MGP_WSBEiJ_T0029460.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70032774 70035476 - MGP_WSBEiJ_P0029460 0610010K14Rik protein_coding protein_coding MGP_WSBEiJ_T0029461.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70032774 70033765 - MGP_WSBEiJ_P0029461 0610010K14Rik protein_coding protein_coding MGP_WSBEiJ_T0029463.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70032930 70035250 - MGP_WSBEiJ_P0029463 0610010K14Rik protein_coding protein_coding MGP_WSBEiJ_T0029464.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70032939 70035061 - 0610010K14Rik protein_coding processed_transcript MGP_WSBEiJ_T0029465.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70032947 70035335 - 0610010K14Rik protein_coding processed_transcript MGP_WSBEiJ_T0029466.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70033304 70035433 - MGP_WSBEiJ_P0029466 0610010K14Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029467.1 MGP_WSBEiJ_G0017949.1 mouse_genomes_project 11 70034025 70035484 - 0610010K14Rik protein_coding retained_intron MGP_WSBEiJ_T0027419.1 MGP_WSBEiJ_G0017434.1 mouse_genomes_project 11 17470433 17488504 + Rab1a protein_coding processed_transcript MGP_WSBEiJ_T0027420.1 MGP_WSBEiJ_G0017434.1 mouse_genomes_project 11 17470603 17493456 + Rab1a protein_coding processed_transcript MGP_WSBEiJ_T0027421.1 MGP_WSBEiJ_G0017434.1 mouse_genomes_project 11 17470624 17496337 + MGP_WSBEiJ_P0027421 Rab1a protein_coding protein_coding MGP_WSBEiJ_T0031720.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103180192 103194184 - Becn1 protein_coding retained_intron MGP_WSBEiJ_T0031721.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103180192 103194192 - Becn1 protein_coding retained_intron MGP_WSBEiJ_T0031722.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103180192 103194218 - MGP_WSBEiJ_P0031722 Becn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031723.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103180743 103194199 - MGP_WSBEiJ_P0031723 Becn1 protein_coding protein_coding MGP_WSBEiJ_T0031724.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103180806 103194169 - MGP_WSBEiJ_P0031724 Becn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031725.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103180818 103185973 - Becn1 protein_coding retained_intron MGP_WSBEiJ_T0031726.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103181810 103184430 - Becn1 protein_coding processed_transcript MGP_WSBEiJ_T0031727.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103182415 103193669 - MGP_WSBEiJ_P0031727 Becn1 protein_coding protein_coding MGP_WSBEiJ_T0031728.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103183314 103188239 - MGP_WSBEiJ_P0031728 Becn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031729.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103183430 103194170 - MGP_WSBEiJ_P0031729 Becn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031730.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103183461 103187368 - Becn1 protein_coding retained_intron MGP_WSBEiJ_T0031731.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103187478 103194138 - MGP_WSBEiJ_P0031731 Becn1 protein_coding protein_coding MGP_WSBEiJ_T0031732.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103187838 103194181 - MGP_WSBEiJ_P0031732 Becn1 protein_coding protein_coding MGP_WSBEiJ_T0031733.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103188157 103194172 - Becn1 protein_coding retained_intron MGP_WSBEiJ_T0031734.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103190008 103194187 - Becn1 protein_coding processed_transcript MGP_WSBEiJ_T0031735.1 MGP_WSBEiJ_G0018547.1 mouse_genomes_project 11 103193392 103194173 - Becn1 protein_coding retained_intron MGP_WSBEiJ_T0032233.1 MGP_WSBEiJ_G0018652.1 mouse_genomes_project 11 108403247 108424657 - MGP_WSBEiJ_P0032233 Ccdc47 protein_coding protein_coding MGP_WSBEiJ_T0032234.1 MGP_WSBEiJ_G0018652.1 mouse_genomes_project 11 108408071 108411721 - MGP_WSBEiJ_P0032234 Ccdc47 protein_coding protein_coding MGP_WSBEiJ_T0032235.1 MGP_WSBEiJ_G0018652.1 mouse_genomes_project 11 108408910 108412730 - MGP_WSBEiJ_P0032235 Ccdc47 protein_coding protein_coding MGP_WSBEiJ_T0032236.1 MGP_WSBEiJ_G0018652.1 mouse_genomes_project 11 108409297 108410198 - MGP_WSBEiJ_P0032236 Ccdc47 protein_coding protein_coding MGP_WSBEiJ_T0032237.1 MGP_WSBEiJ_G0018652.1 mouse_genomes_project 11 108411585 108412837 - Ccdc47 protein_coding processed_transcript MGP_WSBEiJ_T0030296.1 MGP_WSBEiJ_G0018153.1 mouse_genomes_project 11 79341987 79365553 - MGP_WSBEiJ_P0030296 Lgals9 protein_coding protein_coding MGP_WSBEiJ_T0030297.1 MGP_WSBEiJ_G0018153.1 mouse_genomes_project 11 79341992 79365531 - MGP_WSBEiJ_P0030297 Lgals9 protein_coding protein_coding MGP_WSBEiJ_T0030298.1 MGP_WSBEiJ_G0018153.1 mouse_genomes_project 11 79342408 79365438 - MGP_WSBEiJ_P0030298 Lgals9 protein_coding protein_coding MGP_WSBEiJ_T0030299.1 MGP_WSBEiJ_G0018153.1 mouse_genomes_project 11 79345909 79349386 - Lgals9 protein_coding retained_intron MGP_WSBEiJ_T0012300.1 MGP_WSBEiJ_G0010430.1 mouse_genomes_project 11 30664846 30665425 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003111.1 MGP_WSBEiJ_G0002895.1 mouse_genomes_project 11 59153128 59154330 - Med9os antisense antisense MGP_WSBEiJ_T0003112.1 MGP_WSBEiJ_G0002895.1 mouse_genomes_project 11 59153128 59154380 - Med9os antisense antisense MGP_WSBEiJ_T0003113.1 MGP_WSBEiJ_G0002895.1 mouse_genomes_project 11 59153128 59154381 - Med9os antisense antisense MGP_WSBEiJ_T0096909.1 MGP_WSBEiJ_G0035590.1 mouse_genomes_project 11 24604455 24604537 + n-R5s68 rRNA rRNA MGP_WSBEiJ_T0031660.1 MGP_WSBEiJ_G0018533.1 mouse_genomes_project 11 102959497 102964428 + MGP_WSBEiJ_P0031660 Mlx protein_coding protein_coding MGP_WSBEiJ_T0031661.1 MGP_WSBEiJ_G0018533.1 mouse_genomes_project 11 102959497 102964428 + MGP_WSBEiJ_P0031661 Mlx protein_coding protein_coding MGP_WSBEiJ_T0031662.1 MGP_WSBEiJ_G0018533.1 mouse_genomes_project 11 102959510 102963347 + Mlx protein_coding processed_transcript MGP_WSBEiJ_T0031663.1 MGP_WSBEiJ_G0018533.1 mouse_genomes_project 11 102959510 102963367 + Mlx protein_coding processed_transcript MGP_WSBEiJ_T0031664.1 MGP_WSBEiJ_G0018533.1 mouse_genomes_project 11 102959520 102964428 + MGP_WSBEiJ_P0031664 Mlx protein_coding protein_coding MGP_WSBEiJ_T0031665.1 MGP_WSBEiJ_G0018533.1 mouse_genomes_project 11 102959524 102961186 + MGP_WSBEiJ_P0031665 Mlx protein_coding protein_coding MGP_WSBEiJ_T0031666.1 MGP_WSBEiJ_G0018533.1 mouse_genomes_project 11 102961882 102963739 + Mlx protein_coding processed_transcript MGP_WSBEiJ_T0028275.1 MGP_WSBEiJ_G0017657.1 mouse_genomes_project 11 52185503 52196948 + MGP_WSBEiJ_P0028275 Shroom1 protein_coding protein_coding MGP_WSBEiJ_T0028276.1 MGP_WSBEiJ_G0017657.1 mouse_genomes_project 11 52185528 52195580 + MGP_WSBEiJ_P0028276 Shroom1 protein_coding protein_coding MGP_WSBEiJ_T0028277.1 MGP_WSBEiJ_G0017657.1 mouse_genomes_project 11 52185544 52196937 + Shroom1 protein_coding retained_intron MGP_WSBEiJ_T0028278.1 MGP_WSBEiJ_G0017657.1 mouse_genomes_project 11 52185547 52196683 + Shroom1 protein_coding retained_intron MGP_WSBEiJ_T0028279.1 MGP_WSBEiJ_G0017657.1 mouse_genomes_project 11 52185577 52195584 + MGP_WSBEiJ_P0028279 Shroom1 protein_coding protein_coding MGP_WSBEiJ_T0028280.1 MGP_WSBEiJ_G0017657.1 mouse_genomes_project 11 52193777 52194135 + Shroom1 protein_coding processed_transcript MGP_WSBEiJ_T0029817.1 MGP_WSBEiJ_G0018041.1 mouse_genomes_project 11 74035136 74036227 + MGP_WSBEiJ_P0029817 Olfr397 protein_coding protein_coding MGP_WSBEiJ_T0003084.1 MGP_WSBEiJ_G0002871.1 mouse_genomes_project 11 50645216 50646275 + Gm12204 antisense antisense MGP_WSBEiJ_T0030776.1 MGP_WSBEiJ_G0018275.1 mouse_genomes_project 11 88763097 88779075 - MGP_WSBEiJ_P0030776 Epx protein_coding protein_coding MGP_WSBEiJ_T0030777.1 MGP_WSBEiJ_G0018275.1 mouse_genomes_project 11 88772942 88775343 - Epx protein_coding processed_transcript MGP_WSBEiJ_T0027286.1 MGP_WSBEiJ_G0017400.1 mouse_genomes_project 11 3677639 3696333 + MGP_WSBEiJ_P0027286 Ramp3 protein_coding protein_coding MGP_WSBEiJ_T0027287.1 MGP_WSBEiJ_G0017400.1 mouse_genomes_project 11 3677683 3696330 + Ramp3 protein_coding processed_transcript MGP_WSBEiJ_T0006280.1 MGP_WSBEiJ_G0005233.1 mouse_genomes_project 11 120417377 120418357 + Gm11729 lincRNA lincRNA MGP_WSBEiJ_T0098940.1 MGP_WSBEiJ_G0037603.1 mouse_genomes_project 11 78501994 78502065 - Snord4a snoRNA snoRNA MGP_WSBEiJ_T0027654.1 MGP_WSBEiJ_G0017483.1 mouse_genomes_project 11 28111601 28160243 - MGP_WSBEiJ_P0027654 4930505A04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027655.1 MGP_WSBEiJ_G0017483.1 mouse_genomes_project 11 28111601 28160224 - MGP_WSBEiJ_P0027655 4930505A04Rik protein_coding protein_coding MGP_WSBEiJ_T0012454.1 MGP_WSBEiJ_G0010584.1 mouse_genomes_project 11 98322185 98322992 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009615.1 MGP_WSBEiJ_G0007772.1 mouse_genomes_project 11 118269020 118269120 - Mir3968 miRNA miRNA MGP_WSBEiJ_T0027395.1 MGP_WSBEiJ_G0017428.1 mouse_genomes_project 11 14390906 14399251 - MGP_WSBEiJ_P0027395 Pno1 protein_coding protein_coding MGP_WSBEiJ_T0027396.1 MGP_WSBEiJ_G0017428.1 mouse_genomes_project 11 14396472 14398737 - Pno1 protein_coding processed_transcript MGP_WSBEiJ_T0029520.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70383470 70441147 + MGP_WSBEiJ_P0029520 Mink1 protein_coding protein_coding MGP_WSBEiJ_T0029521.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70383479 70440789 + MGP_WSBEiJ_P0029521 Mink1 protein_coding protein_coding MGP_WSBEiJ_T0029522.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70383487 70441143 + MGP_WSBEiJ_P0029522 Mink1 protein_coding protein_coding MGP_WSBEiJ_T0029523.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70383606 70441148 + MGP_WSBEiJ_P0029523 Mink1 protein_coding protein_coding MGP_WSBEiJ_T0029524.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70383659 70440373 + MGP_WSBEiJ_P0029524 Mink1 protein_coding protein_coding MGP_WSBEiJ_T0029525.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70421005 70427045 + Mink1 protein_coding processed_transcript MGP_WSBEiJ_T0029526.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70424002 70441148 + MGP_WSBEiJ_P0029526 Mink1 protein_coding protein_coding MGP_WSBEiJ_T0029527.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70426213 70430817 + MGP_WSBEiJ_P0029527 Mink1 protein_coding protein_coding MGP_WSBEiJ_T0029528.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70426236 70430472 + MGP_WSBEiJ_P0029528 Mink1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029529.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70430093 70431166 + Mink1 protein_coding retained_intron MGP_WSBEiJ_T0029530.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70431204 70432221 + Mink1 protein_coding retained_intron MGP_WSBEiJ_T0029531.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70433130 70436007 + Mink1 protein_coding retained_intron MGP_WSBEiJ_T0029532.1 MGP_WSBEiJ_G0017965.1 mouse_genomes_project 11 70435348 70437338 + Mink1 protein_coding retained_intron MGP_WSBEiJ_T0012397.1 MGP_WSBEiJ_G0010527.1 mouse_genomes_project 11 73188756 73194023 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006183.1 MGP_WSBEiJ_G0005165.1 mouse_genomes_project 11 71885819 71897466 - 4930401O10Rik lincRNA lincRNA MGP_WSBEiJ_T0003205.1 MGP_WSBEiJ_G0002968.1 mouse_genomes_project 11 98376584 98381541 - Gm11525 antisense antisense MGP_WSBEiJ_T0003279.1 MGP_WSBEiJ_G0003027.1 mouse_genomes_project 11 120821810 120823540 - Gm11723 antisense antisense MGP_WSBEiJ_T0032810.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119030899 119056387 - Fbf1 protein_coding processed_transcript MGP_WSBEiJ_T0032811.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119030899 119035754 - Fbf1 protein_coding processed_transcript MGP_WSBEiJ_T0032812.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119030899 119056760 - MGP_WSBEiJ_P0032812 Fbf1 protein_coding protein_coding MGP_WSBEiJ_T0032813.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119030900 119054521 - MGP_WSBEiJ_P0032813 Fbf1 protein_coding protein_coding MGP_WSBEiJ_T0032814.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119031856 119039402 - Fbf1 protein_coding processed_transcript MGP_WSBEiJ_T0032815.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119043325 119046097 - Fbf1 protein_coding processed_transcript MGP_WSBEiJ_T0032816.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119043356 119047500 - Fbf1 protein_coding processed_transcript MGP_WSBEiJ_T0032817.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119043692 119056761 - MGP_WSBEiJ_P0032817 Fbf1 protein_coding protein_coding MGP_WSBEiJ_T0032818.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119044583 119054490 - Fbf1 protein_coding processed_transcript MGP_WSBEiJ_T0032819.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119051935 119056773 - Fbf1 protein_coding processed_transcript MGP_WSBEiJ_T0032820.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119053286 119056755 - MGP_WSBEiJ_P0032820 Fbf1 protein_coding protein_coding MGP_WSBEiJ_T0032821.1 MGP_WSBEiJ_G0018773.1 mouse_genomes_project 11 119054389 119056372 - Fbf1 protein_coding retained_intron MGP_WSBEiJ_T0027922.1 MGP_WSBEiJ_G0017559.1 mouse_genomes_project 11 44518938 44523284 + MGP_WSBEiJ_P0027922 Fndc9 protein_coding protein_coding MGP_WSBEiJ_T0030325.1 MGP_WSBEiJ_G0018161.1 mouse_genomes_project 11 79944695 79948730 - MGP_WSBEiJ_P0030325 Evi2a protein_coding protein_coding MGP_WSBEiJ_T0030326.1 MGP_WSBEiJ_G0018161.1 mouse_genomes_project 11 79944703 79948751 - MGP_WSBEiJ_P0030326 Evi2a protein_coding protein_coding MGP_WSBEiJ_T0030327.1 MGP_WSBEiJ_G0018161.1 mouse_genomes_project 11 79945096 79945915 - MGP_WSBEiJ_P0030327 Evi2a protein_coding protein_coding MGP_WSBEiJ_T0030328.1 MGP_WSBEiJ_G0018161.1 mouse_genomes_project 11 79945824 79946286 - MGP_WSBEiJ_P0030328 Evi2a protein_coding protein_coding MGP_WSBEiJ_T0030329.1 MGP_WSBEiJ_G0018161.1 mouse_genomes_project 11 79946207 79948751 - Evi2a protein_coding processed_transcript MGP_WSBEiJ_T0033269.1 MGP_WSBEiJ_G0018861.1 mouse_genomes_project 11 123670189 123677520 + MGP_WSBEiJ_P0033269 Slc25a10 protein_coding protein_coding MGP_WSBEiJ_T0033270.1 MGP_WSBEiJ_G0018861.1 mouse_genomes_project 11 123670237 123676926 + Slc25a10 protein_coding processed_transcript MGP_WSBEiJ_T0033271.1 MGP_WSBEiJ_G0018861.1 mouse_genomes_project 11 123670258 123674242 + Slc25a10 protein_coding processed_transcript MGP_WSBEiJ_T0033272.1 MGP_WSBEiJ_G0018861.1 mouse_genomes_project 11 123670264 123675249 + Slc25a10 protein_coding processed_transcript MGP_WSBEiJ_T0033273.1 MGP_WSBEiJ_G0018861.1 mouse_genomes_project 11 123674427 123676296 + Slc25a10 protein_coding processed_transcript MGP_WSBEiJ_T0033274.1 MGP_WSBEiJ_G0018861.1 mouse_genomes_project 11 123676057 123676610 + Slc25a10 protein_coding processed_transcript MGP_WSBEiJ_T0027260.1 MGP_WSBEiJ_G0017396.1 mouse_genomes_project 11 3549865 3605684 + MGP_WSBEiJ_P0027260 Ccm2 protein_coding protein_coding MGP_WSBEiJ_T0027261.1 MGP_WSBEiJ_G0017396.1 mouse_genomes_project 11 3549888 3598643 + MGP_WSBEiJ_P0027261 Ccm2 protein_coding protein_coding MGP_WSBEiJ_T0027262.1 MGP_WSBEiJ_G0017396.1 mouse_genomes_project 11 3564210 3605674 + MGP_WSBEiJ_P0027262 Ccm2 protein_coding protein_coding MGP_WSBEiJ_T0027263.1 MGP_WSBEiJ_G0017396.1 mouse_genomes_project 11 3565152 3602295 + MGP_WSBEiJ_P0027263 Ccm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027264.1 MGP_WSBEiJ_G0017396.1 mouse_genomes_project 11 3565161 3566994 + Ccm2 protein_coding processed_transcript MGP_WSBEiJ_T0027265.1 MGP_WSBEiJ_G0017396.1 mouse_genomes_project 11 3565174 3602232 + MGP_WSBEiJ_P0027265 Ccm2 protein_coding protein_coding MGP_WSBEiJ_T0027266.1 MGP_WSBEiJ_G0017396.1 mouse_genomes_project 11 3565270 3605682 + MGP_WSBEiJ_P0027266 Ccm2 protein_coding protein_coding MGP_WSBEiJ_T0027267.1 MGP_WSBEiJ_G0017396.1 mouse_genomes_project 11 3602209 3603430 + Ccm2 protein_coding retained_intron MGP_WSBEiJ_T0031494.1 MGP_WSBEiJ_G0018481.1 mouse_genomes_project 11 101654828 101659455 + MGP_WSBEiJ_P0031494 protein_coding protein_coding MGP_WSBEiJ_T0012429.1 MGP_WSBEiJ_G0010559.1 mouse_genomes_project 11 85845124 85845533 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029763.1 MGP_WSBEiJ_G0018015.1 mouse_genomes_project 11 73168472 73181054 + MGP_WSBEiJ_P0029763 P2rx5 protein_coding protein_coding MGP_WSBEiJ_T0029764.1 MGP_WSBEiJ_G0018015.1 mouse_genomes_project 11 73168636 73178867 + MGP_WSBEiJ_P0029764 P2rx5 protein_coding protein_coding MGP_WSBEiJ_T0029765.1 MGP_WSBEiJ_G0018015.1 mouse_genomes_project 11 73168636 73178867 + MGP_WSBEiJ_P0029765 P2rx5 protein_coding protein_coding MGP_WSBEiJ_T0026999.1 MGP_WSBEiJ_G0017336.1 mouse_genomes_project 11 768181 775825 - MGP_WSBEiJ_P0026999 Slc35e4 protein_coding protein_coding MGP_WSBEiJ_T0027000.1 MGP_WSBEiJ_G0017336.1 mouse_genomes_project 11 768182 775825 - MGP_WSBEiJ_P0027000 Slc35e4 protein_coding protein_coding MGP_WSBEiJ_T0030955.1 MGP_WSBEiJ_G0018317.1 mouse_genomes_project 11 95715151 95725527 - MGP_WSBEiJ_P0030955 Epn3 protein_coding protein_coding MGP_WSBEiJ_T0030956.1 MGP_WSBEiJ_G0018317.1 mouse_genomes_project 11 95716665 95725462 - Epn3 protein_coding processed_transcript MGP_WSBEiJ_T0030957.1 MGP_WSBEiJ_G0018317.1 mouse_genomes_project 11 95716703 95725748 - MGP_WSBEiJ_P0030957 Epn3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030958.1 MGP_WSBEiJ_G0018317.1 mouse_genomes_project 11 95721554 95723803 - Epn3 protein_coding processed_transcript MGP_WSBEiJ_T0030959.1 MGP_WSBEiJ_G0018317.1 mouse_genomes_project 11 95721918 95724673 - Epn3 protein_coding processed_transcript MGP_WSBEiJ_T0031848.1 MGP_WSBEiJ_G0018573.1 mouse_genomes_project 11 104027634 104068400 - MGP_WSBEiJ_P0031848 Mpp2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0031849.1 MGP_WSBEiJ_G0018573.1 mouse_genomes_project 11 104028149 104055372 - MGP_WSBEiJ_P0031849 Mpp2 protein_coding protein_coding MGP_WSBEiJ_T0031850.1 MGP_WSBEiJ_G0018573.1 mouse_genomes_project 11 104032731 104055307 - Mpp2 protein_coding processed_transcript MGP_WSBEiJ_T0031851.1 MGP_WSBEiJ_G0018573.1 mouse_genomes_project 11 104035184 104058614 - Mpp2 protein_coding retained_intron MGP_WSBEiJ_T0031852.1 MGP_WSBEiJ_G0018573.1 mouse_genomes_project 11 104053537 104068311 - Mpp2 protein_coding processed_transcript MGP_WSBEiJ_T0031853.1 MGP_WSBEiJ_G0018573.1 mouse_genomes_project 11 104053591 104068299 - Mpp2 protein_coding processed_transcript MGP_WSBEiJ_T0028050.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48365714 48410899 + MGP_WSBEiJ_P0028050 Mapk9 protein_coding protein_coding MGP_WSBEiJ_T0028051.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48365714 48410899 + MGP_WSBEiJ_P0028051 Mapk9 protein_coding protein_coding MGP_WSBEiJ_T0028052.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48365714 48410899 + MGP_WSBEiJ_P0028052 Mapk9 protein_coding protein_coding MGP_WSBEiJ_T0028053.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48365716 48410899 + MGP_WSBEiJ_P0028053 Mapk9 protein_coding protein_coding MGP_WSBEiJ_T0028054.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48365734 48396881 + Mapk9 protein_coding processed_transcript MGP_WSBEiJ_T0028055.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48365856 48393505 + Mapk9 protein_coding processed_transcript MGP_WSBEiJ_T0028056.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48373175 48410889 + MGP_WSBEiJ_P0028056 Mapk9 protein_coding protein_coding MGP_WSBEiJ_T0028057.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48373192 48394434 + Mapk9 protein_coding processed_transcript MGP_WSBEiJ_T0028058.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48373219 48407788 + MGP_WSBEiJ_P0028058 Mapk9 protein_coding protein_coding MGP_WSBEiJ_T0028059.1 MGP_WSBEiJ_G0017604.1 mouse_genomes_project 11 48373219 48407788 + MGP_WSBEiJ_P0028059 Mapk9 protein_coding protein_coding MGP_WSBEiJ_T0028433.1 MGP_WSBEiJ_G0017695.1 mouse_genomes_project 11 54321372 54337010 - MGP_WSBEiJ_P0028433 Atox1 protein_coding protein_coding MGP_WSBEiJ_T0028434.1 MGP_WSBEiJ_G0017695.1 mouse_genomes_project 11 54321375 54336968 - Atox1 protein_coding processed_transcript MGP_WSBEiJ_T0027416.1 MGP_WSBEiJ_G0017433.1 mouse_genomes_project 11 17316749 17370934 - MGP_WSBEiJ_P0027416 Actr2 protein_coding protein_coding MGP_WSBEiJ_T0027417.1 MGP_WSBEiJ_G0017433.1 mouse_genomes_project 11 17334286 17370888 - Actr2 protein_coding processed_transcript MGP_WSBEiJ_T0027418.1 MGP_WSBEiJ_G0017433.1 mouse_genomes_project 11 17357925 17370930 - Actr2 protein_coding retained_intron MGP_WSBEiJ_T0032005.1 MGP_WSBEiJ_G0018598.1 mouse_genomes_project 11 104848575 104869748 - MGP_WSBEiJ_P0032005 Gjc1 protein_coding protein_coding MGP_WSBEiJ_T0032006.1 MGP_WSBEiJ_G0018598.1 mouse_genomes_project 11 104848575 104853799 - MGP_WSBEiJ_P0032006 Gjc1 protein_coding protein_coding MGP_WSBEiJ_T0032007.1 MGP_WSBEiJ_G0018598.1 mouse_genomes_project 11 104848575 104869227 - MGP_WSBEiJ_P0032007 Gjc1 protein_coding protein_coding MGP_WSBEiJ_T0032008.1 MGP_WSBEiJ_G0018598.1 mouse_genomes_project 11 104849727 104854686 - Gjc1 protein_coding retained_intron MGP_WSBEiJ_T0032009.1 MGP_WSBEiJ_G0018598.1 mouse_genomes_project 11 104850172 104869258 - Gjc1 protein_coding processed_transcript MGP_WSBEiJ_T0032742.1 MGP_WSBEiJ_G0018760.1 mouse_genomes_project 11 118765617 118768159 - Recql5 protein_coding retained_intron MGP_WSBEiJ_T0032743.1 MGP_WSBEiJ_G0018760.1 mouse_genomes_project 11 118765617 118806459 - MGP_WSBEiJ_P0032743 Recql5 protein_coding protein_coding MGP_WSBEiJ_T0032744.1 MGP_WSBEiJ_G0018760.1 mouse_genomes_project 11 118765617 118806459 - MGP_WSBEiJ_P0032744 Recql5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032745.1 MGP_WSBEiJ_G0018760.1 mouse_genomes_project 11 118768437 118800370 - MGP_WSBEiJ_P0032745 Recql5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032746.1 MGP_WSBEiJ_G0018760.1 mouse_genomes_project 11 118769287 118806459 - Recql5 protein_coding retained_intron MGP_WSBEiJ_T0032747.1 MGP_WSBEiJ_G0018760.1 mouse_genomes_project 11 118769831 118780295 - Recql5 protein_coding processed_transcript MGP_WSBEiJ_T0032752.1 MGP_WSBEiJ_G0018760.1 mouse_genomes_project 11 118787363 118806459 - MGP_WSBEiJ_P0032752 Recql5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032753.1 MGP_WSBEiJ_G0018760.1 mouse_genomes_project 11 118798409 118800538 - Recql5 protein_coding retained_intron MGP_WSBEiJ_T0012357.1 MGP_WSBEiJ_G0010487.1 mouse_genomes_project 11 57576669 57576953 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029854.1 MGP_WSBEiJ_G0018058.1 mouse_genomes_project 11 74887551 74937439 + MGP_WSBEiJ_P0029854 Mettl16 protein_coding protein_coding MGP_WSBEiJ_T0029855.1 MGP_WSBEiJ_G0018058.1 mouse_genomes_project 11 74887551 74948056 + MGP_WSBEiJ_P0029855 Mettl16 protein_coding protein_coding MGP_WSBEiJ_T0029856.1 MGP_WSBEiJ_G0018058.1 mouse_genomes_project 11 74887637 74890343 + MGP_WSBEiJ_P0029856 Mettl16 protein_coding protein_coding MGP_WSBEiJ_T0029857.1 MGP_WSBEiJ_G0018058.1 mouse_genomes_project 11 74887646 74937439 + MGP_WSBEiJ_P0029857 Mettl16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029858.1 MGP_WSBEiJ_G0018058.1 mouse_genomes_project 11 74920194 74936491 + Mettl16 protein_coding retained_intron MGP_WSBEiJ_T0029859.1 MGP_WSBEiJ_G0018058.1 mouse_genomes_project 11 74926377 74937056 + Mettl16 protein_coding processed_transcript MGP_WSBEiJ_T0031746.1 MGP_WSBEiJ_G0018552.1 mouse_genomes_project 11 103316088 103335400 - MGP_WSBEiJ_P0031746 Gm27029 protein_coding protein_coding MGP_WSBEiJ_T0031748.1 MGP_WSBEiJ_G0018552.1 mouse_genomes_project 11 103316263 103335677 - MGP_WSBEiJ_P0031748 Gm27029 protein_coding protein_coding MGP_WSBEiJ_T0096916.1 MGP_WSBEiJ_G0035597.1 mouse_genomes_project 11 84450097 84450207 - Gm22311 rRNA rRNA MGP_WSBEiJ_T0006153.1 MGP_WSBEiJ_G0005141.1 mouse_genomes_project 11 59103405 59112134 + Gm12714 lincRNA lincRNA MGP_WSBEiJ_T0006148.1 MGP_WSBEiJ_G0005136.1 mouse_genomes_project 11 50772417 50775676 - 9430098F02Rik lincRNA lincRNA MGP_WSBEiJ_T0012276.1 MGP_WSBEiJ_G0010406.1 mouse_genomes_project 11 24932911 24933308 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003261.1 MGP_WSBEiJ_G0003014.1 mouse_genomes_project 11 112185832 112187917 + Gm11684 antisense antisense MGP_WSBEiJ_T0097734.1 MGP_WSBEiJ_G0036397.1 mouse_genomes_project 11 100636764 100636871 + Gm22061 snRNA snRNA MGP_WSBEiJ_T0006164.1 MGP_WSBEiJ_G0005151.1 mouse_genomes_project 11 63609461 63628111 + Gm12290 lincRNA lincRNA MGP_WSBEiJ_T0098906.1 MGP_WSBEiJ_G0037569.1 mouse_genomes_project 11 22684276 22684404 - Gm24255 snoRNA snoRNA MGP_WSBEiJ_T0031365.1 MGP_WSBEiJ_G0018423.1 mouse_genomes_project 11 100191512 100197584 - MGP_WSBEiJ_P0031365 Ormdl3 protein_coding protein_coding MGP_WSBEiJ_T0012256.1 MGP_WSBEiJ_G0010386.1 mouse_genomes_project 11 18134576 18134783 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000815.1 MGP_WSBEiJ_G0000754.1 mouse_genomes_project 11 29405595 29405969 + TEC TEC MGP_WSBEiJ_T0029594.1 MGP_WSBEiJ_G0017978.1 mouse_genomes_project 11 70633739 70655971 - MGP_WSBEiJ_P0029594 Scimp protein_coding protein_coding MGP_WSBEiJ_T0029595.1 MGP_WSBEiJ_G0017978.1 mouse_genomes_project 11 70634171 70655944 - MGP_WSBEiJ_P0029595 Scimp protein_coding protein_coding MGP_WSBEiJ_T0027036.1 MGP_WSBEiJ_G0017345.1 mouse_genomes_project 11 1003831 1009791 + MGP_WSBEiJ_P0027036 Rnf215 protein_coding protein_coding MGP_WSBEiJ_T0027037.1 MGP_WSBEiJ_G0017345.1 mouse_genomes_project 11 1003843 1005998 + MGP_WSBEiJ_P0027037 Rnf215 protein_coding protein_coding MGP_WSBEiJ_T0027038.1 MGP_WSBEiJ_G0017345.1 mouse_genomes_project 11 1003911 1005847 + MGP_WSBEiJ_P0027038 Rnf215 protein_coding protein_coding MGP_WSBEiJ_T0027039.1 MGP_WSBEiJ_G0017345.1 mouse_genomes_project 11 1004131 1005785 + Rnf215 protein_coding processed_transcript MGP_WSBEiJ_T0003124.1 MGP_WSBEiJ_G0002905.1 mouse_genomes_project 11 62000710 62006096 + Lrrc75aos1 antisense antisense MGP_WSBEiJ_T0012391.1 MGP_WSBEiJ_G0010521.1 mouse_genomes_project 11 70241547 70242085 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100490.1 MGP_WSBEiJ_G0038949.1 mouse_genomes_project 11 95999574 96000358 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0030517.1 MGP_WSBEiJ_G0018215.1 mouse_genomes_project 11 84327740 84328316 - MGP_WSBEiJ_P0030517 Rpl9-ps1 protein_coding protein_coding MGP_WSBEiJ_T0011099.1 MGP_WSBEiJ_G0009256.1 mouse_genomes_project 11 483113 483260 - Gm27640 misc_RNA misc_RNA MGP_WSBEiJ_T0028828.1 MGP_WSBEiJ_G0017809.1 mouse_genomes_project 11 61065408 61151469 - MGP_WSBEiJ_P0028828 Ulk2 protein_coding protein_coding MGP_WSBEiJ_T0028829.1 MGP_WSBEiJ_G0017809.1 mouse_genomes_project 11 61067261 61150898 - Ulk2 protein_coding processed_transcript MGP_WSBEiJ_T0028830.1 MGP_WSBEiJ_G0017809.1 mouse_genomes_project 11 61090388 61094509 - Ulk2 protein_coding processed_transcript MGP_WSBEiJ_T0032628.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118280962 118295860 + MGP_WSBEiJ_P0032628 Slc16a5 protein_coding protein_coding MGP_WSBEiJ_T0032629.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118280994 118288580 + MGP_WSBEiJ_P0032629 Slc16a5 protein_coding protein_coding MGP_WSBEiJ_T0032630.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118281052 118288685 + Slc16a5 protein_coding processed_transcript MGP_WSBEiJ_T0032631.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118281097 118295832 + MGP_WSBEiJ_P0032631 Slc16a5 protein_coding protein_coding MGP_WSBEiJ_T0032632.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118282288 118295860 + Slc16a5 protein_coding processed_transcript MGP_WSBEiJ_T0032633.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118282303 118283481 + Slc16a5 protein_coding processed_transcript MGP_WSBEiJ_T0032634.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118282306 118288685 + Slc16a5 protein_coding processed_transcript MGP_WSBEiJ_T0032635.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118282312 118288629 + Slc16a5 protein_coding processed_transcript MGP_WSBEiJ_T0032636.1 MGP_WSBEiJ_G0018744.1 mouse_genomes_project 11 118283032 118295068 + Slc16a5 protein_coding retained_intron MGP_WSBEiJ_T0012342.1 MGP_WSBEiJ_G0010472.1 mouse_genomes_project 11 52677018 52678183 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030638.1 MGP_WSBEiJ_G0018244.1 mouse_genomes_project 11 86630217 86637174 - MGP_WSBEiJ_P0030638 Gm11444 protein_coding protein_coding MGP_WSBEiJ_T0012298.1 MGP_WSBEiJ_G0010428.1 mouse_genomes_project 11 29920032 29920729 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003097.1 MGP_WSBEiJ_G0002883.1 mouse_genomes_project 11 54046999 54052762 - Slc36a1os antisense antisense MGP_WSBEiJ_T0003098.1 MGP_WSBEiJ_G0002883.1 mouse_genomes_project 11 54048173 54052944 - Slc36a1os antisense antisense MGP_WSBEiJ_T0029833.1 MGP_WSBEiJ_G0018051.1 mouse_genomes_project 11 74426911 74427859 - MGP_WSBEiJ_P0029833 Olfr410 protein_coding protein_coding MGP_WSBEiJ_T0029399.1 MGP_WSBEiJ_G0017939.1 mouse_genomes_project 11 69785848 69795329 + MGP_WSBEiJ_P0029399 Dvl2 protein_coding protein_coding MGP_WSBEiJ_T0029400.1 MGP_WSBEiJ_G0017939.1 mouse_genomes_project 11 69785870 69797519 + MGP_WSBEiJ_P0029400 Dvl2 protein_coding protein_coding MGP_WSBEiJ_T0029401.1 MGP_WSBEiJ_G0017939.1 mouse_genomes_project 11 69786074 69792194 + Dvl2 protein_coding retained_intron MGP_WSBEiJ_T0029402.1 MGP_WSBEiJ_G0017939.1 mouse_genomes_project 11 69786088 69791246 + Dvl2 protein_coding retained_intron MGP_WSBEiJ_T0029403.1 MGP_WSBEiJ_G0017939.1 mouse_genomes_project 11 69790709 69792705 + Dvl2 protein_coding retained_intron MGP_WSBEiJ_T0029404.1 MGP_WSBEiJ_G0017939.1 mouse_genomes_project 11 69792211 69793301 + Dvl2 protein_coding retained_intron MGP_WSBEiJ_T0030556.1 MGP_WSBEiJ_G0018228.1 mouse_genomes_project 11 84853161 84874038 - MGP_WSBEiJ_P0030556 Gm11437 protein_coding protein_coding MGP_WSBEiJ_T0027587.1 MGP_WSBEiJ_G0017471.1 mouse_genomes_project 11 26511478 26584524 + MGP_WSBEiJ_P0027587 Efemp1 protein_coding protein_coding MGP_WSBEiJ_T0027588.1 MGP_WSBEiJ_G0017471.1 mouse_genomes_project 11 26511518 26579303 + Efemp1 protein_coding processed_transcript MGP_WSBEiJ_T0027589.1 MGP_WSBEiJ_G0017471.1 mouse_genomes_project 11 26573453 26584524 + MGP_WSBEiJ_P0027589 Efemp1 protein_coding protein_coding MGP_WSBEiJ_T0030966.1 MGP_WSBEiJ_G0018319.1 mouse_genomes_project 11 95772481 95781964 - Rsad1 protein_coding processed_transcript MGP_WSBEiJ_T0030967.1 MGP_WSBEiJ_G0018319.1 mouse_genomes_project 11 95772481 95781908 - MGP_WSBEiJ_P0030967 Rsad1 protein_coding protein_coding MGP_WSBEiJ_T0030968.1 MGP_WSBEiJ_G0018319.1 mouse_genomes_project 11 95777275 95781501 - Rsad1 protein_coding processed_transcript MGP_WSBEiJ_T0030969.1 MGP_WSBEiJ_G0018319.1 mouse_genomes_project 11 95777340 95781311 - Rsad1 protein_coding processed_transcript MGP_WSBEiJ_T0032964.1 MGP_WSBEiJ_G0018800.1 mouse_genomes_project 11 120090464 120128299 + Sec14l1 protein_coding retained_intron MGP_WSBEiJ_T0032965.1 MGP_WSBEiJ_G0018800.1 mouse_genomes_project 11 120090468 120135352 + MGP_WSBEiJ_P0032965 Sec14l1 protein_coding protein_coding MGP_WSBEiJ_T0032966.1 MGP_WSBEiJ_G0018800.1 mouse_genomes_project 11 120090534 120133646 + MGP_WSBEiJ_P0032966 Sec14l1 protein_coding protein_coding MGP_WSBEiJ_T0032967.1 MGP_WSBEiJ_G0018800.1 mouse_genomes_project 11 120090534 120135355 + MGP_WSBEiJ_P0032967 Sec14l1 protein_coding protein_coding MGP_WSBEiJ_T0032968.1 MGP_WSBEiJ_G0018800.1 mouse_genomes_project 11 120090548 120105224 + Sec14l1 protein_coding processed_transcript MGP_WSBEiJ_T0032969.1 MGP_WSBEiJ_G0018800.1 mouse_genomes_project 11 120131162 120132568 + Sec14l1 protein_coding retained_intron MGP_WSBEiJ_T0009620.1 MGP_WSBEiJ_G0007777.1 mouse_genomes_project 11 121929575 121929655 - Gm25040 miRNA miRNA MGP_WSBEiJ_T0032865.1 MGP_WSBEiJ_G0018784.1 mouse_genomes_project 11 119346987 119361561 - MGP_WSBEiJ_P0032865 Qrich2 protein_coding protein_coding MGP_WSBEiJ_T0032866.1 MGP_WSBEiJ_G0018784.1 mouse_genomes_project 11 119346989 119362451 - MGP_WSBEiJ_P0032866 Qrich2 protein_coding protein_coding MGP_WSBEiJ_T0032867.1 MGP_WSBEiJ_G0018784.1 mouse_genomes_project 11 119350164 119354191 - Qrich2 protein_coding retained_intron MGP_WSBEiJ_T0029832.1 MGP_WSBEiJ_G0018050.1 mouse_genomes_project 11 74287533 74288620 + MGP_WSBEiJ_P0029832 protein_coding protein_coding MGP_WSBEiJ_T0026925.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 92639 94736 + Patz1 protein_coding processed_transcript MGP_WSBEiJ_T0026926.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 92932 114473 + Patz1 protein_coding processed_transcript MGP_WSBEiJ_T0026927.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 92967 99593 + Patz1 protein_coding processed_transcript MGP_WSBEiJ_T0026928.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 93046 114473 + MGP_WSBEiJ_P0026928 Patz1 protein_coding protein_coding MGP_WSBEiJ_T0026929.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 94544 100819 + MGP_WSBEiJ_P0026929 Patz1 protein_coding protein_coding MGP_WSBEiJ_T0026930.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 94544 114473 + MGP_WSBEiJ_P0026930 Patz1 protein_coding protein_coding MGP_WSBEiJ_T0026931.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 94947 114473 + MGP_WSBEiJ_P0026931 Patz1 protein_coding protein_coding MGP_WSBEiJ_T0026932.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 94965 114473 + MGP_WSBEiJ_P0026932 Patz1 protein_coding protein_coding MGP_WSBEiJ_T0026933.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 95967 113532 + Patz1 protein_coding processed_transcript MGP_WSBEiJ_T0026934.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 96703 99204 + Patz1 protein_coding processed_transcript MGP_WSBEiJ_T0026935.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 97376 99431 + Patz1 protein_coding processed_transcript MGP_WSBEiJ_T0026936.1 MGP_WSBEiJ_G0017324.1 mouse_genomes_project 11 103673 113057 + MGP_WSBEiJ_P0026936 Patz1 protein_coding protein_coding MGP_WSBEiJ_T0028690.1 MGP_WSBEiJ_G0017780.1 mouse_genomes_project 11 59709494 59770901 + MGP_WSBEiJ_P0028690 Myo15 protein_coding protein_coding MGP_WSBEiJ_T0028691.1 MGP_WSBEiJ_G0017780.1 mouse_genomes_project 11 59709494 59770901 + MGP_WSBEiJ_P0028691 Myo15 protein_coding protein_coding MGP_WSBEiJ_T0028692.1 MGP_WSBEiJ_G0017780.1 mouse_genomes_project 11 59709494 59770901 + MGP_WSBEiJ_P0028692 Myo15 protein_coding protein_coding MGP_WSBEiJ_T0028693.1 MGP_WSBEiJ_G0017780.1 mouse_genomes_project 11 59720076 59751495 + MGP_WSBEiJ_P0028693 Myo15 protein_coding protein_coding MGP_WSBEiJ_T0028694.1 MGP_WSBEiJ_G0017780.1 mouse_genomes_project 11 59751316 59764514 + Myo15 protein_coding retained_intron MGP_WSBEiJ_T0016603.1 MGP_WSBEiJ_G0014592.1 mouse_genomes_project 11 58926249 58933093 - 1700007J10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016604.1 MGP_WSBEiJ_G0014592.1 mouse_genomes_project 11 58926249 58940468 - 1700007J10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0028854.1 MGP_WSBEiJ_G0017813.1 mouse_genomes_project 11 61594095 61608237 - MGP_WSBEiJ_P0028854 Zswim7 protein_coding protein_coding MGP_WSBEiJ_T0012363.1 MGP_WSBEiJ_G0010493.1 mouse_genomes_project 11 59574876 59575838 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097700.1 MGP_WSBEiJ_G0036363.1 mouse_genomes_project 11 65113825 65113935 + Gm26128 snRNA snRNA MGP_WSBEiJ_T0012227.1 MGP_WSBEiJ_G0010357.1 mouse_genomes_project 11 7497029 7497342 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098934.1 MGP_WSBEiJ_G0037597.1 mouse_genomes_project 11 75021943 75022036 + Snord91a snoRNA snoRNA MGP_WSBEiJ_T0012261.1 MGP_WSBEiJ_G0010391.1 mouse_genomes_project 11 18762417 18763148 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006176.1 MGP_WSBEiJ_G0005160.1 mouse_genomes_project 11 71374382 71380685 - Gm16013 lincRNA lincRNA MGP_WSBEiJ_T0098930.1 MGP_WSBEiJ_G0037593.1 mouse_genomes_project 11 69429033 69429177 - Gm25835 snoRNA snoRNA MGP_WSBEiJ_T0012427.1 MGP_WSBEiJ_G0010557.1 mouse_genomes_project 11 84488812 84489434 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012290.1 MGP_WSBEiJ_G0010420.1 mouse_genomes_project 11 28261322 28261818 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003116.1 MGP_WSBEiJ_G0002898.1 mouse_genomes_project 11 60782290 60782964 - B9d1os antisense antisense MGP_WSBEiJ_T0030043.1 MGP_WSBEiJ_G0018098.1 mouse_genomes_project 11 76960765 77001329 - MGP_WSBEiJ_P0030043 Gosr1 protein_coding protein_coding MGP_WSBEiJ_T0030044.1 MGP_WSBEiJ_G0018098.1 mouse_genomes_project 11 76984344 77001317 - Gosr1 protein_coding processed_transcript MGP_WSBEiJ_T0030670.1 MGP_WSBEiJ_G0018251.1 mouse_genomes_project 11 87372847 87395541 + MGP_WSBEiJ_P0030670 Tubd1 protein_coding protein_coding MGP_WSBEiJ_T0030671.1 MGP_WSBEiJ_G0018251.1 mouse_genomes_project 11 87372847 87395542 + MGP_WSBEiJ_P0030671 Tubd1 protein_coding protein_coding MGP_WSBEiJ_T0030672.1 MGP_WSBEiJ_G0018251.1 mouse_genomes_project 11 87372847 87395542 + MGP_WSBEiJ_P0030672 Tubd1 protein_coding protein_coding MGP_WSBEiJ_T0030673.1 MGP_WSBEiJ_G0018251.1 mouse_genomes_project 11 87372847 87395542 + MGP_WSBEiJ_P0030673 Tubd1 protein_coding protein_coding MGP_WSBEiJ_T0030674.1 MGP_WSBEiJ_G0018251.1 mouse_genomes_project 11 87383786 87395542 + MGP_WSBEiJ_P0030674 Tubd1 protein_coding protein_coding MGP_WSBEiJ_T0033022.1 MGP_WSBEiJ_G0018813.1 mouse_genomes_project 11 120909987 120915514 - Tha1 protein_coding processed_transcript MGP_WSBEiJ_T0033023.1 MGP_WSBEiJ_G0018813.1 mouse_genomes_project 11 120909987 120915492 - MGP_WSBEiJ_P0033023 Tha1 protein_coding protein_coding MGP_WSBEiJ_T0033024.1 MGP_WSBEiJ_G0018813.1 mouse_genomes_project 11 120911760 120913949 - Tha1 protein_coding processed_transcript MGP_WSBEiJ_T0003185.1 MGP_WSBEiJ_G0002954.1 mouse_genomes_project 11 89895165 89921104 + Scpep1os antisense antisense MGP_WSBEiJ_T0029829.1 MGP_WSBEiJ_G0018049.1 mouse_genomes_project 11 74271514 74288281 + MGP_WSBEiJ_P0029829 Olfr404-ps1 protein_coding protein_coding MGP_WSBEiJ_T0029830.1 MGP_WSBEiJ_G0018049.1 mouse_genomes_project 11 74271573 74288117 + MGP_WSBEiJ_P0029830 Olfr404-ps1 protein_coding protein_coding MGP_WSBEiJ_T0029831.1 MGP_WSBEiJ_G0018049.1 mouse_genomes_project 11 74271612 74288116 + MGP_WSBEiJ_P0029831 Olfr404-ps1 protein_coding protein_coding MGP_WSBEiJ_T0009585.1 MGP_WSBEiJ_G0007742.1 mouse_genomes_project 11 97667513 97667615 + Mir196a-1 miRNA miRNA MGP_WSBEiJ_T0032770.1 MGP_WSBEiJ_G0018766.1 mouse_genomes_project 11 118897319 118904220 - MGP_WSBEiJ_P0032770 protein_coding protein_coding MGP_WSBEiJ_T0032771.1 MGP_WSBEiJ_G0018766.1 mouse_genomes_project 11 118897368 118900155 - MGP_WSBEiJ_P0032771 protein_coding protein_coding MGP_WSBEiJ_T0032772.1 MGP_WSBEiJ_G0018766.1 mouse_genomes_project 11 118899089 118900124 - protein_coding processed_transcript MGP_WSBEiJ_T0032833.1 MGP_WSBEiJ_G0018776.1 mouse_genomes_project 11 119117099 119134678 - MGP_WSBEiJ_P0032833 Evpl protein_coding protein_coding MGP_WSBEiJ_T0032500.1 MGP_WSBEiJ_G0018712.1 mouse_genomes_project 11 116481192 116778220 - MGP_WSBEiJ_P0032500 Sdk2 protein_coding protein_coding MGP_WSBEiJ_T0032501.1 MGP_WSBEiJ_G0018712.1 mouse_genomes_project 11 116499874 116521659 - Sdk2 protein_coding processed_transcript MGP_WSBEiJ_T0032502.1 MGP_WSBEiJ_G0018712.1 mouse_genomes_project 11 116513959 116537808 - Sdk2 protein_coding processed_transcript MGP_WSBEiJ_T0032503.1 MGP_WSBEiJ_G0018712.1 mouse_genomes_project 11 116561200 116777977 - MGP_WSBEiJ_P0032503 Sdk2 protein_coding protein_coding MGP_WSBEiJ_T0032504.1 MGP_WSBEiJ_G0018712.1 mouse_genomes_project 11 116580822 116779048 - Sdk2 protein_coding processed_transcript MGP_WSBEiJ_T0032505.1 MGP_WSBEiJ_G0018712.1 mouse_genomes_project 11 116650084 116779031 - Sdk2 protein_coding processed_transcript MGP_WSBEiJ_T0027867.1 MGP_WSBEiJ_G0017541.1 mouse_genomes_project 11 41675746 41738466 + MGP_WSBEiJ_P0027867 Ccnjl protein_coding protein_coding MGP_WSBEiJ_T0027868.1 MGP_WSBEiJ_G0017541.1 mouse_genomes_project 11 41676208 41703481 + Ccnjl protein_coding processed_transcript MGP_WSBEiJ_T0016633.1 MGP_WSBEiJ_G0014609.1 mouse_genomes_project 11 86570718 86615641 - 2610027K06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016634.1 MGP_WSBEiJ_G0014609.1 mouse_genomes_project 11 86574850 86615655 - 2610027K06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016635.1 MGP_WSBEiJ_G0014609.1 mouse_genomes_project 11 86574936 86583169 - 2610027K06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0031987.1 MGP_WSBEiJ_G0018594.1 mouse_genomes_project 11 104633962 104637625 + MGP_WSBEiJ_P0031987 Fzd2 protein_coding protein_coding MGP_WSBEiJ_T0027371.1 MGP_WSBEiJ_G0017420.1 mouse_genomes_project 11 13399503 13427119 + MGP_WSBEiJ_P0027371 Vstm2a protein_coding unknown_likely_coding MGP_WSBEiJ_T0027372.1 MGP_WSBEiJ_G0017420.1 mouse_genomes_project 11 13399560 13429218 + MGP_WSBEiJ_P0027372 Vstm2a protein_coding protein_coding MGP_WSBEiJ_T0027373.1 MGP_WSBEiJ_G0017420.1 mouse_genomes_project 11 13399639 13580969 + MGP_WSBEiJ_P0027373 Vstm2a protein_coding protein_coding MGP_WSBEiJ_T0006082.1 MGP_WSBEiJ_G0005078.1 mouse_genomes_project 11 11166411 11287170 - lincRNA lincRNA MGP_WSBEiJ_T0033085.1 MGP_WSBEiJ_G0018826.1 mouse_genomes_project 11 122072389 122077045 + MGP_WSBEiJ_P0033085 Enpp7 protein_coding protein_coding MGP_WSBEiJ_T0033086.1 MGP_WSBEiJ_G0018826.1 mouse_genomes_project 11 122072417 122076869 + MGP_WSBEiJ_P0033086 Enpp7 protein_coding protein_coding MGP_WSBEiJ_T0016572.1 MGP_WSBEiJ_G0014574.1 mouse_genomes_project 11 20206718 20209842 + Gm20456 processed_transcript processed_transcript MGP_WSBEiJ_T0098904.1 MGP_WSBEiJ_G0037567.1 mouse_genomes_project 11 20214128 20214230 + Gm23772 snoRNA snoRNA MGP_WSBEiJ_T0011112.1 MGP_WSBEiJ_G0009269.1 mouse_genomes_project 11 86054627 86054921 - Gm22587 misc_RNA misc_RNA MGP_WSBEiJ_T0098900.1 MGP_WSBEiJ_G0037563.1 mouse_genomes_project 11 9800825 9800955 + Gm22789 snoRNA snoRNA MGP_WSBEiJ_T0033066.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121540931 121554197 + MGP_WSBEiJ_P0033066 Engase protein_coding protein_coding MGP_WSBEiJ_T0033067.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121541043 121543356 + MGP_WSBEiJ_P0033067 Engase protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033068.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121541048 121548052 + MGP_WSBEiJ_P0033068 Engase protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033069.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121541062 121554075 + MGP_WSBEiJ_P0033069 Engase protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033070.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121541074 121552761 + MGP_WSBEiJ_P0033070 Engase protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033071.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121541085 121554197 + MGP_WSBEiJ_P0033071 Engase protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033072.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121546109 121547934 + Engase protein_coding retained_intron MGP_WSBEiJ_T0033073.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121547376 121552761 + Engase protein_coding retained_intron MGP_WSBEiJ_T0033074.1 MGP_WSBEiJ_G0018824.1 mouse_genomes_project 11 121549477 121552497 + MGP_WSBEiJ_P0033074 Engase protein_coding protein_coding MGP_WSBEiJ_T0027548.1 MGP_WSBEiJ_G0017462.1 mouse_genomes_project 11 21150446 21185257 - MGP_WSBEiJ_P0027548 Rel protein_coding protein_coding MGP_WSBEiJ_T0006108.1 MGP_WSBEiJ_G0005102.1 mouse_genomes_project 11 22678314 22827306 + 4933427E13Rik lincRNA lincRNA MGP_WSBEiJ_T0006110.1 MGP_WSBEiJ_G0005102.1 mouse_genomes_project 11 22785842 22827310 + 4933427E13Rik lincRNA lincRNA MGP_WSBEiJ_T0006111.1 MGP_WSBEiJ_G0005102.1 mouse_genomes_project 11 22785871 22790415 + 4933427E13Rik lincRNA lincRNA MGP_WSBEiJ_T0006112.1 MGP_WSBEiJ_G0005102.1 mouse_genomes_project 11 22789653 22818361 + 4933427E13Rik lincRNA lincRNA MGP_WSBEiJ_T0011097.1 MGP_WSBEiJ_G0009254.1 mouse_genomes_project 11 481220 481456 - Gm27517 misc_RNA misc_RNA MGP_WSBEiJ_T0100492.1 MGP_WSBEiJ_G0038951.1 mouse_genomes_project 11 95999574 96000352 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0030572.1 MGP_WSBEiJ_G0018231.1 mouse_genomes_project 11 85547788 85554243 - MGP_WSBEiJ_P0030572 Mrm1 protein_coding protein_coding MGP_WSBEiJ_T0030573.1 MGP_WSBEiJ_G0018231.1 mouse_genomes_project 11 85549450 85550106 - Mrm1 protein_coding retained_intron MGP_WSBEiJ_T0030574.1 MGP_WSBEiJ_G0018231.1 mouse_genomes_project 11 85549720 85553462 - Mrm1 protein_coding processed_transcript MGP_WSBEiJ_T0029699.1 MGP_WSBEiJ_G0017998.1 mouse_genomes_project 11 72283790 72288743 + MGP_WSBEiJ_P0029699 Fbxo39 protein_coding protein_coding MGP_WSBEiJ_T0000822.1 MGP_WSBEiJ_G0000761.1 mouse_genomes_project 11 123763784 123764952 + TEC TEC MGP_WSBEiJ_T0028390.1 MGP_WSBEiJ_G0017683.1 mouse_genomes_project 11 53652814 53689258 - MGP_WSBEiJ_P0028390 Lyrm7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028391.1 MGP_WSBEiJ_G0017683.1 mouse_genomes_project 11 53666175 53688950 - MGP_WSBEiJ_P0028391 Lyrm7 protein_coding protein_coding MGP_WSBEiJ_T0028392.1 MGP_WSBEiJ_G0017683.1 mouse_genomes_project 11 53666176 53688930 - MGP_WSBEiJ_P0028392 Lyrm7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028393.1 MGP_WSBEiJ_G0017683.1 mouse_genomes_project 11 53667455 53677551 - Lyrm7 protein_coding retained_intron MGP_WSBEiJ_T0028394.1 MGP_WSBEiJ_G0017683.1 mouse_genomes_project 11 53667495 53688951 - Lyrm7 protein_coding processed_transcript MGP_WSBEiJ_T0028395.1 MGP_WSBEiJ_G0017683.1 mouse_genomes_project 11 53677238 53688927 - Lyrm7 protein_coding retained_intron MGP_WSBEiJ_T0012296.1 MGP_WSBEiJ_G0010426.1 mouse_genomes_project 11 28719066 28719670 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032467.1 MGP_WSBEiJ_G0018705.1 mouse_genomes_project 11 115887800 116236806 - MGP_WSBEiJ_P0032467 Slc39a11 protein_coding protein_coding MGP_WSBEiJ_T0032468.1 MGP_WSBEiJ_G0018705.1 mouse_genomes_project 11 115887800 116236794 - MGP_WSBEiJ_P0032468 Slc39a11 protein_coding protein_coding MGP_WSBEiJ_T0032469.1 MGP_WSBEiJ_G0018705.1 mouse_genomes_project 11 115887800 116236797 - MGP_WSBEiJ_P0032469 Slc39a11 protein_coding protein_coding MGP_WSBEiJ_T0032470.1 MGP_WSBEiJ_G0018705.1 mouse_genomes_project 11 116023444 116337339 - MGP_WSBEiJ_P0032470 Slc39a11 protein_coding protein_coding MGP_WSBEiJ_T0032471.1 MGP_WSBEiJ_G0018705.1 mouse_genomes_project 11 116124452 116236817 - MGP_WSBEiJ_P0032471 Slc39a11 protein_coding protein_coding MGP_WSBEiJ_T0032472.1 MGP_WSBEiJ_G0018705.1 mouse_genomes_project 11 116192613 116337347 - MGP_WSBEiJ_P0032472 Slc39a11 protein_coding protein_coding MGP_WSBEiJ_T0032473.1 MGP_WSBEiJ_G0018705.1 mouse_genomes_project 11 116230555 116337338 - MGP_WSBEiJ_P0032473 Slc39a11 protein_coding protein_coding MGP_WSBEiJ_T0032474.1 MGP_WSBEiJ_G0018705.1 mouse_genomes_project 11 116249906 116337338 - Slc39a11 protein_coding processed_transcript MGP_WSBEiJ_T0006130.1 MGP_WSBEiJ_G0005120.1 mouse_genomes_project 11 38552143 38553103 - 3110004A20Rik lincRNA lincRNA MGP_WSBEiJ_T0031759.1 MGP_WSBEiJ_G0018556.1 mouse_genomes_project 11 103355609 103358838 + MGP_WSBEiJ_P0031759 protein_coding protein_coding MGP_WSBEiJ_T0031760.1 MGP_WSBEiJ_G0018556.1 mouse_genomes_project 11 103355749 103357246 + protein_coding processed_transcript MGP_WSBEiJ_T0031761.1 MGP_WSBEiJ_G0018556.1 mouse_genomes_project 11 103355757 103358838 + MGP_WSBEiJ_P0031761 protein_coding protein_coding MGP_WSBEiJ_T0031762.1 MGP_WSBEiJ_G0018556.1 mouse_genomes_project 11 103358185 103358838 + protein_coding processed_transcript MGP_WSBEiJ_T0030105.1 MGP_WSBEiJ_G0018111.1 mouse_genomes_project 11 77784904 77789550 - MGP_WSBEiJ_P0030105 Gm10392 protein_coding protein_coding MGP_WSBEiJ_T0032401.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111824178 111842933 + MGP_WSBEiJ_P0032401 Amz2 protein_coding protein_coding MGP_WSBEiJ_T0032402.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111824208 111858323 + MGP_WSBEiJ_P0032402 Amz2 protein_coding protein_coding MGP_WSBEiJ_T0032403.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111824210 111837564 + MGP_WSBEiJ_P0032403 Amz2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0032404.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111824214 111830185 + Amz2 protein_coding retained_intron MGP_WSBEiJ_T0032405.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111824458 111839993 + MGP_WSBEiJ_P0032405 Amz2 protein_coding protein_coding MGP_WSBEiJ_T0032406.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111831849 111835474 + Amz2 protein_coding processed_transcript MGP_WSBEiJ_T0032407.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111834627 111835579 + Amz2 protein_coding retained_intron MGP_WSBEiJ_T0032408.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111834840 111842036 + Amz2 protein_coding processed_transcript MGP_WSBEiJ_T0032409.1 MGP_WSBEiJ_G0018689.1 mouse_genomes_project 11 111845799 111858764 + Amz2 protein_coding processed_transcript MGP_WSBEiJ_T0012421.1 MGP_WSBEiJ_G0010551.1 mouse_genomes_project 11 81570339 81572317 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027928.1 MGP_WSBEiJ_G0017561.1 mouse_genomes_project 11 44689577 44699632 + Fam71b protein_coding processed_transcript MGP_WSBEiJ_T0027929.1 MGP_WSBEiJ_G0017561.1 mouse_genomes_project 11 44697744 44700945 + MGP_WSBEiJ_P0027929 Fam71b protein_coding protein_coding MGP_WSBEiJ_T0012405.1 MGP_WSBEiJ_G0010535.1 mouse_genomes_project 11 75201335 75201676 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012348.1 MGP_WSBEiJ_G0010478.1 mouse_genomes_project 11 53786416 53786870 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100463.1 MGP_WSBEiJ_G0038922.1 mouse_genomes_project 11 5041586 5043229 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0027422.1 MGP_WSBEiJ_G0017435.1 mouse_genomes_project 11 17497343 17521163 - MGP_WSBEiJ_P0027422 Cep68 protein_coding protein_coding MGP_WSBEiJ_T0027423.1 MGP_WSBEiJ_G0017435.1 mouse_genomes_project 11 17508713 17521163 - MGP_WSBEiJ_P0027423 Cep68 protein_coding protein_coding MGP_WSBEiJ_T0027424.1 MGP_WSBEiJ_G0017435.1 mouse_genomes_project 11 17508714 17521174 - MGP_WSBEiJ_P0027424 Cep68 protein_coding protein_coding MGP_WSBEiJ_T0027425.1 MGP_WSBEiJ_G0017435.1 mouse_genomes_project 11 17511868 17521128 - Cep68 protein_coding retained_intron MGP_WSBEiJ_T0012335.1 MGP_WSBEiJ_G0010465.1 mouse_genomes_project 11 49533921 49537248 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006230.1 MGP_WSBEiJ_G0005197.1 mouse_genomes_project 11 97031168 97033938 + Gm26830 lincRNA lincRNA MGP_WSBEiJ_T0031056.1 MGP_WSBEiJ_G0018345.1 mouse_genomes_project 11 97078669 97142368 + MGP_WSBEiJ_P0031056 Zfp652 protein_coding protein_coding MGP_WSBEiJ_T0031057.1 MGP_WSBEiJ_G0018345.1 mouse_genomes_project 11 97080183 97207533 + MGP_WSBEiJ_P0031057 Zfp652 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031059.1 MGP_WSBEiJ_G0018345.1 mouse_genomes_project 11 97119067 97142368 + MGP_WSBEiJ_P0031059 Zfp652 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031060.1 MGP_WSBEiJ_G0018345.1 mouse_genomes_project 11 97119134 97134752 + MGP_WSBEiJ_P0031060 Zfp652 protein_coding protein_coding MGP_WSBEiJ_T0016589.1 MGP_WSBEiJ_G0014586.1 mouse_genomes_project 11 52300881 52303499 - A430108G06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016590.1 MGP_WSBEiJ_G0014586.1 mouse_genomes_project 11 52300957 52303507 - A430108G06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0031407.1 MGP_WSBEiJ_G0018433.1 mouse_genomes_project 11 100513561 100533731 + MGP_WSBEiJ_P0031407 protein_coding protein_coding MGP_WSBEiJ_T0031408.1 MGP_WSBEiJ_G0018433.1 mouse_genomes_project 11 100523498 100525772 + protein_coding retained_intron MGP_WSBEiJ_T0031409.1 MGP_WSBEiJ_G0018433.1 mouse_genomes_project 11 100530385 100533033 + protein_coding retained_intron MGP_WSBEiJ_T0033013.1 MGP_WSBEiJ_G0018810.1 mouse_genomes_project 11 120866505 120880644 + MGP_WSBEiJ_P0033013 Afmid protein_coding protein_coding MGP_WSBEiJ_T0033014.1 MGP_WSBEiJ_G0018810.1 mouse_genomes_project 11 120866555 120877739 + MGP_WSBEiJ_P0033014 Afmid protein_coding protein_coding MGP_WSBEiJ_T0033015.1 MGP_WSBEiJ_G0018810.1 mouse_genomes_project 11 120866562 120873225 + Afmid protein_coding retained_intron MGP_WSBEiJ_T0033016.1 MGP_WSBEiJ_G0018810.1 mouse_genomes_project 11 120872678 120875922 + Afmid protein_coding retained_intron MGP_WSBEiJ_T0033017.1 MGP_WSBEiJ_G0018810.1 mouse_genomes_project 11 120872804 120877736 + Afmid protein_coding retained_intron MGP_WSBEiJ_T0033018.1 MGP_WSBEiJ_G0018810.1 mouse_genomes_project 11 120872847 120876029 + Afmid protein_coding retained_intron MGP_WSBEiJ_T0097724.1 MGP_WSBEiJ_G0036387.1 mouse_genomes_project 11 88310038 88310139 - Gm23137 snRNA snRNA MGP_WSBEiJ_T0009536.1 MGP_WSBEiJ_G0007693.1 mouse_genomes_project 11 58516683 58516779 - Gm24756 miRNA miRNA MGP_WSBEiJ_T0027458.1 MGP_WSBEiJ_G0017443.1 mouse_genomes_project 11 18875575 18890903 - MGP_WSBEiJ_P0027458 Mdh1 protein_coding protein_coding MGP_WSBEiJ_T0027459.1 MGP_WSBEiJ_G0017443.1 mouse_genomes_project 11 18877278 18878518 - Mdh1 protein_coding processed_transcript MGP_WSBEiJ_T0027460.1 MGP_WSBEiJ_G0017443.1 mouse_genomes_project 11 18878310 18882997 - Mdh1 protein_coding processed_transcript MGP_WSBEiJ_T0027461.1 MGP_WSBEiJ_G0017443.1 mouse_genomes_project 11 18881684 18891077 - MGP_WSBEiJ_P0027461 Mdh1 protein_coding protein_coding MGP_WSBEiJ_T0031397.1 MGP_WSBEiJ_G0018431.1 mouse_genomes_project 11 100468026 100482435 + MGP_WSBEiJ_P0031397 Msl1 protein_coding protein_coding MGP_WSBEiJ_T0031398.1 MGP_WSBEiJ_G0018431.1 mouse_genomes_project 11 100468301 100473563 + MGP_WSBEiJ_P0031398 Msl1 protein_coding protein_coding MGP_WSBEiJ_T0031399.1 MGP_WSBEiJ_G0018431.1 mouse_genomes_project 11 100468310 100478957 + MGP_WSBEiJ_P0031399 Msl1 protein_coding protein_coding MGP_WSBEiJ_T0031400.1 MGP_WSBEiJ_G0018431.1 mouse_genomes_project 11 100471164 100478119 + MGP_WSBEiJ_P0031400 Msl1 protein_coding protein_coding MGP_WSBEiJ_T0031401.1 MGP_WSBEiJ_G0018431.1 mouse_genomes_project 11 100472675 100476631 + MGP_WSBEiJ_P0031401 Msl1 protein_coding protein_coding MGP_WSBEiJ_T0031402.1 MGP_WSBEiJ_G0018431.1 mouse_genomes_project 11 100476782 100478291 + Msl1 protein_coding processed_transcript MGP_WSBEiJ_T0003256.1 MGP_WSBEiJ_G0003012.1 mouse_genomes_project 11 111744300 111756220 - Gm11696 antisense antisense MGP_WSBEiJ_T0003257.1 MGP_WSBEiJ_G0003012.1 mouse_genomes_project 11 111745236 111745891 - Gm11696 antisense antisense MGP_WSBEiJ_T0003258.1 MGP_WSBEiJ_G0003012.1 mouse_genomes_project 11 111746243 111756664 - Gm11696 antisense antisense MGP_WSBEiJ_T0003259.1 MGP_WSBEiJ_G0003012.1 mouse_genomes_project 11 111748304 111756253 - Gm11696 antisense antisense MGP_WSBEiJ_T0003074.1 MGP_WSBEiJ_G0002861.1 mouse_genomes_project 11 41379481 41430266 - Gm12147 antisense antisense MGP_WSBEiJ_T0030324.1 MGP_WSBEiJ_G0018160.1 mouse_genomes_project 11 79933188 79941896 - MGP_WSBEiJ_P0030324 protein_coding protein_coding MGP_WSBEiJ_T0028555.1 MGP_WSBEiJ_G0017749.1 mouse_genomes_project 11 58319954 58328310 - MGP_WSBEiJ_P0028555 Iba57 protein_coding protein_coding MGP_WSBEiJ_T0028556.1 MGP_WSBEiJ_G0017749.1 mouse_genomes_project 11 58325693 58327888 - MGP_WSBEiJ_P0028556 Iba57 protein_coding protein_coding MGP_WSBEiJ_T0028557.1 MGP_WSBEiJ_G0017749.1 mouse_genomes_project 11 58325925 58328271 - MGP_WSBEiJ_P0028557 Iba57 protein_coding protein_coding MGP_WSBEiJ_T0027606.1 MGP_WSBEiJ_G0017475.1 mouse_genomes_project 11 27032221 27167354 + MGP_WSBEiJ_P0027606 Ccdc88a protein_coding protein_coding MGP_WSBEiJ_T0027607.1 MGP_WSBEiJ_G0017475.1 mouse_genomes_project 11 27032340 27084680 + MGP_WSBEiJ_P0027607 Ccdc88a protein_coding protein_coding MGP_WSBEiJ_T0027608.1 MGP_WSBEiJ_G0017475.1 mouse_genomes_project 11 27111566 27116346 + Ccdc88a protein_coding processed_transcript MGP_WSBEiJ_T0027609.1 MGP_WSBEiJ_G0017475.1 mouse_genomes_project 11 27119005 27139218 + MGP_WSBEiJ_P0027609 Ccdc88a protein_coding protein_coding MGP_WSBEiJ_T0027610.1 MGP_WSBEiJ_G0017475.1 mouse_genomes_project 11 27125460 27160649 + MGP_WSBEiJ_P0027610 Ccdc88a protein_coding protein_coding MGP_WSBEiJ_T0027611.1 MGP_WSBEiJ_G0017475.1 mouse_genomes_project 11 27142486 27160061 + MGP_WSBEiJ_P0027611 Ccdc88a protein_coding protein_coding MGP_WSBEiJ_T0027612.1 MGP_WSBEiJ_G0017475.1 mouse_genomes_project 11 27150428 27154360 + Ccdc88a protein_coding processed_transcript MGP_WSBEiJ_T0027590.1 MGP_WSBEiJ_G0017472.1 mouse_genomes_project 11 26778178 26812107 + Pnpt1 protein_coding processed_transcript MGP_WSBEiJ_T0027591.1 MGP_WSBEiJ_G0017472.1 mouse_genomes_project 11 26778182 26783133 + Pnpt1 protein_coding processed_transcript MGP_WSBEiJ_T0027592.1 MGP_WSBEiJ_G0017472.1 mouse_genomes_project 11 26778182 26812255 + MGP_WSBEiJ_P0027592 Pnpt1 protein_coding protein_coding MGP_WSBEiJ_T0027593.1 MGP_WSBEiJ_G0017472.1 mouse_genomes_project 11 26785744 26793047 + Pnpt1 protein_coding processed_transcript MGP_WSBEiJ_T0028282.1 MGP_WSBEiJ_G0017659.1 mouse_genomes_project 11 52207674 52211376 - MGP_WSBEiJ_P0028282 Sowaha protein_coding protein_coding MGP_WSBEiJ_T0003220.1 MGP_WSBEiJ_G0002978.1 mouse_genomes_project 11 101846331 101881195 + Gm11571 antisense antisense MGP_WSBEiJ_T0006170.1 MGP_WSBEiJ_G0005155.1 mouse_genomes_project 11 66660934 66668606 - 2310065F04Rik lincRNA lincRNA MGP_WSBEiJ_T0006171.1 MGP_WSBEiJ_G0005155.1 mouse_genomes_project 11 66662485 66665319 - 2310065F04Rik lincRNA lincRNA MGP_WSBEiJ_T0003176.1 MGP_WSBEiJ_G0002947.1 mouse_genomes_project 11 86545091 86554742 - Bcas3os2 antisense antisense MGP_WSBEiJ_T0031832.1 MGP_WSBEiJ_G0018570.1 mouse_genomes_project 11 103954654 103962646 + MGP_WSBEiJ_P0031832 1700006E09Rik protein_coding protein_coding MGP_WSBEiJ_T0031833.1 MGP_WSBEiJ_G0018570.1 mouse_genomes_project 11 103954659 103961240 + MGP_WSBEiJ_P0031833 1700006E09Rik protein_coding protein_coding MGP_WSBEiJ_T0031834.1 MGP_WSBEiJ_G0018570.1 mouse_genomes_project 11 103957433 103962654 + MGP_WSBEiJ_P0031834 1700006E09Rik protein_coding protein_coding MGP_WSBEiJ_T0003109.1 MGP_WSBEiJ_G0002893.1 mouse_genomes_project 11 58976702 58981750 - Gm12264 antisense antisense MGP_WSBEiJ_T0098890.1 MGP_WSBEiJ_G0037553.1 mouse_genomes_project 11 629562 629661 + Gm24013 snoRNA snoRNA MGP_WSBEiJ_T0009549.1 MGP_WSBEiJ_G0007706.1 mouse_genomes_project 11 69423102 69423185 + Mir1934 miRNA miRNA MGP_WSBEiJ_T0028327.1 MGP_WSBEiJ_G0017670.1 mouse_genomes_project 11 52627837 52665694 - MGP_WSBEiJ_P0028327 Slc22a5 protein_coding protein_coding MGP_WSBEiJ_T0028328.1 MGP_WSBEiJ_G0017670.1 mouse_genomes_project 11 52635280 52665573 - MGP_WSBEiJ_P0028328 Slc22a5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029596.1 MGP_WSBEiJ_G0017979.1 mouse_genomes_project 11 70690015 70795110 + MGP_WSBEiJ_P0029596 Rabep1 protein_coding protein_coding MGP_WSBEiJ_T0029597.1 MGP_WSBEiJ_G0017979.1 mouse_genomes_project 11 70690019 70793304 + Rabep1 protein_coding retained_intron MGP_WSBEiJ_T0029598.1 MGP_WSBEiJ_G0017979.1 mouse_genomes_project 11 70690029 70743364 + MGP_WSBEiJ_P0029598 Rabep1 protein_coding protein_coding MGP_WSBEiJ_T0029599.1 MGP_WSBEiJ_G0017979.1 mouse_genomes_project 11 70690036 70793299 + MGP_WSBEiJ_P0029599 Rabep1 protein_coding protein_coding MGP_WSBEiJ_T0029600.1 MGP_WSBEiJ_G0017979.1 mouse_genomes_project 11 70690162 70792941 + MGP_WSBEiJ_P0029600 Rabep1 protein_coding protein_coding MGP_WSBEiJ_T0029601.1 MGP_WSBEiJ_G0017979.1 mouse_genomes_project 11 70690179 70792647 + MGP_WSBEiJ_P0029601 Rabep1 protein_coding protein_coding MGP_WSBEiJ_T0029602.1 MGP_WSBEiJ_G0017979.1 mouse_genomes_project 11 70690212 70792485 + MGP_WSBEiJ_P0029602 Rabep1 protein_coding protein_coding MGP_WSBEiJ_T0029603.1 MGP_WSBEiJ_G0017979.1 mouse_genomes_project 11 70690212 70792485 + MGP_WSBEiJ_P0029603 Rabep1 protein_coding protein_coding MGP_WSBEiJ_T0029824.1 MGP_WSBEiJ_G0018045.1 mouse_genomes_project 11 74188376 74189324 + MGP_WSBEiJ_P0029824 Olfr401 protein_coding protein_coding MGP_WSBEiJ_T0003183.1 MGP_WSBEiJ_G0002952.1 mouse_genomes_project 11 89318004 89325698 + Gm15893 antisense antisense MGP_WSBEiJ_T0028591.1 MGP_WSBEiJ_G0017761.1 mouse_genomes_project 11 58672761 58692511 - MGP_WSBEiJ_P0028591 Zkscan17 protein_coding protein_coding MGP_WSBEiJ_T0028592.1 MGP_WSBEiJ_G0017761.1 mouse_genomes_project 11 58686787 58693457 - Zkscan17 protein_coding processed_transcript MGP_WSBEiJ_T0028593.1 MGP_WSBEiJ_G0017761.1 mouse_genomes_project 11 58691405 58713888 - Zkscan17 protein_coding processed_transcript MGP_WSBEiJ_T0028594.1 MGP_WSBEiJ_G0017761.1 mouse_genomes_project 11 58691411 58693457 - Zkscan17 protein_coding processed_transcript MGP_WSBEiJ_T0028595.1 MGP_WSBEiJ_G0017761.1 mouse_genomes_project 11 58712706 58714008 - Zkscan17 protein_coding processed_transcript MGP_WSBEiJ_T0012409.1 MGP_WSBEiJ_G0010539.1 mouse_genomes_project 11 77928328 77929095 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028802.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60795157 60856814 - MGP_WSBEiJ_P0028802 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028803.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60795157 60856798 - MGP_WSBEiJ_P0028803 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028804.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60795157 60856798 - MGP_WSBEiJ_P0028804 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028805.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60795157 60856814 - MGP_WSBEiJ_P0028805 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028806.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60795158 60856816 - MGP_WSBEiJ_P0028806 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028807.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60795158 60856816 - MGP_WSBEiJ_P0028807 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028808.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60801076 60824251 - MGP_WSBEiJ_P0028808 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028809.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60810556 60822188 - MGP_WSBEiJ_P0028809 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028810.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60812292 60824420 - Epn2 protein_coding retained_intron MGP_WSBEiJ_T0028811.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60824383 60856787 - MGP_WSBEiJ_P0028811 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028812.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60824569 60856787 - MGP_WSBEiJ_P0028812 Epn2 protein_coding protein_coding MGP_WSBEiJ_T0028813.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60824626 60856791 - Epn2 protein_coding processed_transcript MGP_WSBEiJ_T0028814.1 MGP_WSBEiJ_G0017804.1 mouse_genomes_project 11 60832579 60856799 - Epn2 protein_coding processed_transcript MGP_WSBEiJ_T0098949.1 MGP_WSBEiJ_G0037612.1 mouse_genomes_project 11 99298010 99298105 - Gm27326 snoRNA snoRNA MGP_WSBEiJ_T0028418.1 MGP_WSBEiJ_G0017691.1 mouse_genomes_project 11 54012015 54039531 - MGP_WSBEiJ_P0028418 Slc36a2 protein_coding protein_coding MGP_WSBEiJ_T0028419.1 MGP_WSBEiJ_G0017691.1 mouse_genomes_project 11 54022572 54039531 - Slc36a2 protein_coding processed_transcript MGP_WSBEiJ_T0027907.1 MGP_WSBEiJ_G0017554.1 mouse_genomes_project 11 44216520 44225172 - MGP_WSBEiJ_P0027907 Thg1l protein_coding protein_coding MGP_WSBEiJ_T0027908.1 MGP_WSBEiJ_G0017554.1 mouse_genomes_project 11 44216520 44224866 - MGP_WSBEiJ_P0027908 Thg1l protein_coding protein_coding MGP_WSBEiJ_T0027909.1 MGP_WSBEiJ_G0017554.1 mouse_genomes_project 11 44219874 44224096 - Thg1l protein_coding processed_transcript MGP_WSBEiJ_T0027910.1 MGP_WSBEiJ_G0017554.1 mouse_genomes_project 11 44220856 44224835 - Thg1l protein_coding processed_transcript MGP_WSBEiJ_T0027911.1 MGP_WSBEiJ_G0017554.1 mouse_genomes_project 11 44223948 44225161 - Thg1l protein_coding processed_transcript MGP_WSBEiJ_T0006193.1 MGP_WSBEiJ_G0005174.1 mouse_genomes_project 11 80216784 80217693 - 9130204K15Rik lincRNA lincRNA MGP_WSBEiJ_T0006194.1 MGP_WSBEiJ_G0005174.1 mouse_genomes_project 11 80216851 80313668 - 9130204K15Rik lincRNA lincRNA MGP_WSBEiJ_T0006195.1 MGP_WSBEiJ_G0005174.1 mouse_genomes_project 11 80217314 80299520 - 9130204K15Rik lincRNA lincRNA MGP_WSBEiJ_T0006196.1 MGP_WSBEiJ_G0005174.1 mouse_genomes_project 11 80231965 80240751 - 9130204K15Rik lincRNA lincRNA MGP_WSBEiJ_T0031627.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102741285 102766263 - MGP_WSBEiJ_P0031627 Stat3 protein_coding protein_coding MGP_WSBEiJ_T0031628.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102742701 102744792 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0031629.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102742715 102797152 - MGP_WSBEiJ_P0031629 Stat3 protein_coding protein_coding MGP_WSBEiJ_T0031630.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102743160 102797251 - MGP_WSBEiJ_P0031630 Stat3 protein_coding protein_coding MGP_WSBEiJ_T0031631.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102743957 102748223 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0031632.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102747508 102748282 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0031633.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102748003 102748913 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0031634.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102748450 102753491 - Stat3 protein_coding processed_transcript MGP_WSBEiJ_T0031635.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102748976 102749611 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0031636.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102748978 102752712 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0031637.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102756939 102760527 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0031638.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102760195 102760962 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0031639.1 MGP_WSBEiJ_G0018527.1 mouse_genomes_project 11 102760771 102763341 - Stat3 protein_coding retained_intron MGP_WSBEiJ_T0028131.1 MGP_WSBEiJ_G0017620.1 mouse_genomes_project 11 49395429 49397183 + Grm6 protein_coding processed_transcript MGP_WSBEiJ_T0028132.1 MGP_WSBEiJ_G0017620.1 mouse_genomes_project 11 49395429 49413429 + MGP_WSBEiJ_P0028132 Grm6 protein_coding protein_coding MGP_WSBEiJ_T0028133.1 MGP_WSBEiJ_G0017620.1 mouse_genomes_project 11 49395730 49413400 + MGP_WSBEiJ_P0028133 Grm6 protein_coding protein_coding MGP_WSBEiJ_T0028134.1 MGP_WSBEiJ_G0017620.1 mouse_genomes_project 11 49402875 49413431 + Grm6 protein_coding processed_transcript MGP_WSBEiJ_T0029593.1 MGP_WSBEiJ_G0017977.1 mouse_genomes_project 11 70606734 70615285 + MGP_WSBEiJ_P0029593 Zfp3 protein_coding protein_coding MGP_WSBEiJ_T0003267.1 MGP_WSBEiJ_G0003019.1 mouse_genomes_project 11 118280533 118281943 - Gm11695 antisense antisense MGP_WSBEiJ_T0027984.1 MGP_WSBEiJ_G0017580.1 mouse_genomes_project 11 47448183 47570079 + MGP_WSBEiJ_P0027984 Olfr56 protein_coding protein_coding MGP_WSBEiJ_T0027985.1 MGP_WSBEiJ_G0017580.1 mouse_genomes_project 11 47448183 47570079 + MGP_WSBEiJ_P0027985 Olfr56 protein_coding protein_coding MGP_WSBEiJ_T0027986.1 MGP_WSBEiJ_G0017580.1 mouse_genomes_project 11 47448183 47570079 + MGP_WSBEiJ_P0027986 Olfr56 protein_coding protein_coding MGP_WSBEiJ_T0027991.1 MGP_WSBEiJ_G0017580.1 mouse_genomes_project 11 47519043 47559849 + Olfr56 protein_coding retained_intron MGP_WSBEiJ_T0027993.1 MGP_WSBEiJ_G0017580.1 mouse_genomes_project 11 47519061 47570012 + MGP_WSBEiJ_P0027993 Olfr56 protein_coding protein_coding MGP_WSBEiJ_T0027996.1 MGP_WSBEiJ_G0017580.1 mouse_genomes_project 11 47551440 47570011 + MGP_WSBEiJ_P0027996 Olfr56 protein_coding protein_coding MGP_WSBEiJ_T0012229.1 MGP_WSBEiJ_G0010359.1 mouse_genomes_project 11 10098640 10099358 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031515.1 MGP_WSBEiJ_G0018497.1 mouse_genomes_project 11 101936444 101941737 - MGP_WSBEiJ_P0031515 Krt19 protein_coding protein_coding MGP_WSBEiJ_T0031516.1 MGP_WSBEiJ_G0018497.1 mouse_genomes_project 11 101936541 101939332 - Krt19 protein_coding processed_transcript MGP_WSBEiJ_T0031517.1 MGP_WSBEiJ_G0018497.1 mouse_genomes_project 11 101937754 101944277 - Krt19 protein_coding processed_transcript MGP_WSBEiJ_T0003169.1 MGP_WSBEiJ_G0002943.1 mouse_genomes_project 11 83397053 83398496 - Gm11423 antisense antisense MGP_WSBEiJ_T0003170.1 MGP_WSBEiJ_G0002943.1 mouse_genomes_project 11 83397283 83398496 - Gm11423 antisense antisense MGP_WSBEiJ_T0027656.1 MGP_WSBEiJ_G0017484.1 mouse_genomes_project 11 28195743 28354690 - MGP_WSBEiJ_P0027656 Acyp2 protein_coding protein_coding MGP_WSBEiJ_T0009628.1 MGP_WSBEiJ_G0007785.1 mouse_genomes_project 11 123808091 123808145 - Mir6936 miRNA miRNA MGP_WSBEiJ_T0027687.1 MGP_WSBEiJ_G0017493.1 mouse_genomes_project 11 29674709 29691158 + MGP_WSBEiJ_P0027687 4930524B15Rik protein_coding protein_coding MGP_WSBEiJ_T0012336.1 MGP_WSBEiJ_G0010466.1 mouse_genomes_project 11 49703540 49704779 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006156.1 MGP_WSBEiJ_G0005144.1 mouse_genomes_project 11 60133585 60141216 + Gm26534 lincRNA lincRNA MGP_WSBEiJ_T0012491.1 MGP_WSBEiJ_G0010621.1 mouse_genomes_project 11 111537581 111538584 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097722.1 MGP_WSBEiJ_G0036385.1 mouse_genomes_project 11 88283346 88283510 + Rnu1a1 snRNA snRNA MGP_WSBEiJ_T0028661.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59451947 59585483 - MGP_WSBEiJ_P0028661 Tom1l2 protein_coding protein_coding MGP_WSBEiJ_T0028662.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59451948 59464410 - Tom1l2 protein_coding processed_transcript MGP_WSBEiJ_T0028663.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59451948 59585483 - MGP_WSBEiJ_P0028663 Tom1l2 protein_coding protein_coding MGP_WSBEiJ_T0028664.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59451948 59585483 - MGP_WSBEiJ_P0028664 Tom1l2 protein_coding protein_coding MGP_WSBEiJ_T0028665.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59451948 59585483 - MGP_WSBEiJ_P0028665 Tom1l2 protein_coding protein_coding MGP_WSBEiJ_T0028666.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59454836 59456581 - Tom1l2 protein_coding processed_transcript MGP_WSBEiJ_T0028667.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59455135 59472071 - MGP_WSBEiJ_P0028667 Tom1l2 protein_coding protein_coding MGP_WSBEiJ_T0028668.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59455135 59471559 - MGP_WSBEiJ_P0028668 Tom1l2 protein_coding protein_coding MGP_WSBEiJ_T0028669.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59466971 59585483 - MGP_WSBEiJ_P0028669 Tom1l2 protein_coding protein_coding MGP_WSBEiJ_T0028670.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59467338 59585483 - MGP_WSBEiJ_P0028670 Tom1l2 protein_coding protein_coding MGP_WSBEiJ_T0028671.1 MGP_WSBEiJ_G0017775.1 mouse_genomes_project 11 59480961 59585483 - Tom1l2 protein_coding processed_transcript MGP_WSBEiJ_T0003186.1 MGP_WSBEiJ_G0002955.1 mouse_genomes_project 11 90065650 90069983 + Dgkeos antisense antisense MGP_WSBEiJ_T0003187.1 MGP_WSBEiJ_G0002955.1 mouse_genomes_project 11 90066981 90069983 + Dgkeos antisense antisense MGP_WSBEiJ_T0003188.1 MGP_WSBEiJ_G0002955.1 mouse_genomes_project 11 90067155 90068764 + Dgkeos antisense antisense MGP_WSBEiJ_T0003189.1 MGP_WSBEiJ_G0002955.1 mouse_genomes_project 11 90067159 90068764 + Dgkeos antisense antisense MGP_WSBEiJ_T0032532.1 MGP_WSBEiJ_G0018718.1 mouse_genomes_project 11 117569889 117580259 + MGP_WSBEiJ_P0032532 Gpr142 protein_coding protein_coding MGP_WSBEiJ_T0032533.1 MGP_WSBEiJ_G0018718.1 mouse_genomes_project 11 117569889 117580259 + MGP_WSBEiJ_P0032533 Gpr142 protein_coding protein_coding MGP_WSBEiJ_T0098914.1 MGP_WSBEiJ_G0037577.1 mouse_genomes_project 11 47027829 47027948 + Gm24422 snoRNA snoRNA MGP_WSBEiJ_T0027197.1 MGP_WSBEiJ_G0017381.1 mouse_genomes_project 11 2862576 2864721 - MGP_WSBEiJ_P0027197 Myl7 protein_coding protein_coding MGP_WSBEiJ_T0032702.1 MGP_WSBEiJ_G0018755.1 mouse_genomes_project 11 118624477 118658886 + MGP_WSBEiJ_P0032702 Tmem94 protein_coding protein_coding MGP_WSBEiJ_T0032703.1 MGP_WSBEiJ_G0018755.1 mouse_genomes_project 11 118624486 118645148 + MGP_WSBEiJ_P0032703 Tmem94 protein_coding protein_coding MGP_WSBEiJ_T0032704.1 MGP_WSBEiJ_G0018755.1 mouse_genomes_project 11 118624487 118645472 + MGP_WSBEiJ_P0032704 Tmem94 protein_coding protein_coding MGP_WSBEiJ_T0032705.1 MGP_WSBEiJ_G0018755.1 mouse_genomes_project 11 118624498 118645391 + MGP_WSBEiJ_P0032705 Tmem94 protein_coding protein_coding MGP_WSBEiJ_T0032706.1 MGP_WSBEiJ_G0018755.1 mouse_genomes_project 11 118625765 118634230 + Tmem94 protein_coding processed_transcript MGP_WSBEiJ_T0032707.1 MGP_WSBEiJ_G0018755.1 mouse_genomes_project 11 118632616 118658553 + MGP_WSBEiJ_P0032707 Tmem94 protein_coding protein_coding MGP_WSBEiJ_T0032708.1 MGP_WSBEiJ_G0018755.1 mouse_genomes_project 11 118638736 118658553 + MGP_WSBEiJ_P0032708 Tmem94 protein_coding unknown_likely_coding MGP_WSBEiJ_T0032709.1 MGP_WSBEiJ_G0018755.1 mouse_genomes_project 11 118648134 118651492 + MGP_WSBEiJ_P0032709 Tmem94 protein_coding protein_coding MGP_WSBEiJ_T0029802.1 MGP_WSBEiJ_G0018031.1 mouse_genomes_project 11 73680057 73680996 - MGP_WSBEiJ_P0029802 Olfr385 protein_coding protein_coding MGP_WSBEiJ_T0030525.1 MGP_WSBEiJ_G0018221.1 mouse_genomes_project 11 84439455 84470021 + MGP_WSBEiJ_P0030525 Heatr6 protein_coding protein_coding MGP_WSBEiJ_T0030526.1 MGP_WSBEiJ_G0018221.1 mouse_genomes_project 11 84439473 84468284 + Heatr6 protein_coding processed_transcript MGP_WSBEiJ_T0030527.1 MGP_WSBEiJ_G0018221.1 mouse_genomes_project 11 84439788 84441583 + Heatr6 protein_coding processed_transcript MGP_WSBEiJ_T0030528.1 MGP_WSBEiJ_G0018221.1 mouse_genomes_project 11 84446455 84450742 + Heatr6 protein_coding retained_intron MGP_WSBEiJ_T0030529.1 MGP_WSBEiJ_G0018221.1 mouse_genomes_project 11 84460826 84465180 + Heatr6 protein_coding processed_transcript MGP_WSBEiJ_T0012283.1 MGP_WSBEiJ_G0010413.1 mouse_genomes_project 11 26995453 26995658 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012263.1 MGP_WSBEiJ_G0010393.1 mouse_genomes_project 11 18801990 18802319 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012368.1 MGP_WSBEiJ_G0010498.1 mouse_genomes_project 11 60478788 60479755 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006124.1 MGP_WSBEiJ_G0005114.1 mouse_genomes_project 11 31004917 31022377 + Gm12116 lincRNA lincRNA MGP_WSBEiJ_T0098923.1 MGP_WSBEiJ_G0037586.1 mouse_genomes_project 11 60055520 60055646 + Gm24945 snoRNA snoRNA MGP_WSBEiJ_T0006223.1 MGP_WSBEiJ_G0005192.1 mouse_genomes_project 11 90316977 90323318 + Gm2018 lincRNA lincRNA MGP_WSBEiJ_T0097271.1 MGP_WSBEiJ_G0035950.1 mouse_genomes_project 11 99016590 99018875 - Gm11611 sense_intronic sense_intronic MGP_WSBEiJ_T0009576.1 MGP_WSBEiJ_G0007733.1 mouse_genomes_project 11 83663601 83663664 - Gm27598 miRNA miRNA MGP_WSBEiJ_T0028474.1 MGP_WSBEiJ_G0017709.1 mouse_genomes_project 11 57187696 57198811 + MGP_WSBEiJ_P0028474 Igtp protein_coding protein_coding MGP_WSBEiJ_T0028475.1 MGP_WSBEiJ_G0017709.1 mouse_genomes_project 11 57187698 57198821 + MGP_WSBEiJ_P0028475 Igtp protein_coding protein_coding MGP_WSBEiJ_T0028477.1 MGP_WSBEiJ_G0017709.1 mouse_genomes_project 11 57190208 57198837 + MGP_WSBEiJ_P0028477 Igtp protein_coding protein_coding MGP_WSBEiJ_T0006271.1 MGP_WSBEiJ_G0005227.1 mouse_genomes_project 11 118464887 118477904 + Gm26613 lincRNA lincRNA MGP_WSBEiJ_T0029315.1 MGP_WSBEiJ_G0017923.1 mouse_genomes_project 11 69617005 69621666 + MGP_WSBEiJ_P0029315 Plscr3 protein_coding protein_coding MGP_WSBEiJ_T0029316.1 MGP_WSBEiJ_G0017923.1 mouse_genomes_project 11 69617246 69622689 + MGP_WSBEiJ_P0029316 Plscr3 protein_coding protein_coding MGP_WSBEiJ_T0029317.1 MGP_WSBEiJ_G0017923.1 mouse_genomes_project 11 69617246 69619005 + MGP_WSBEiJ_P0029317 Plscr3 protein_coding protein_coding MGP_WSBEiJ_T0029318.1 MGP_WSBEiJ_G0017923.1 mouse_genomes_project 11 69617305 69621673 + MGP_WSBEiJ_P0029318 Plscr3 protein_coding protein_coding MGP_WSBEiJ_T0027702.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29949383 29962123 - MGP_WSBEiJ_P0027702 Rhbdf1 protein_coding protein_coding MGP_WSBEiJ_T0027703.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29949384 29957129 - Rhbdf1 protein_coding retained_intron MGP_WSBEiJ_T0027704.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29949385 29962103 - MGP_WSBEiJ_P0027704 Rhbdf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027705.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29949602 29950938 - MGP_WSBEiJ_P0027705 Rhbdf1 protein_coding protein_coding MGP_WSBEiJ_T0027706.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29949748 29950699 - Rhbdf1 protein_coding retained_intron MGP_WSBEiJ_T0027707.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29950197 29951069 - Rhbdf1 protein_coding retained_intron MGP_WSBEiJ_T0027708.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29954084 29962103 - MGP_WSBEiJ_P0027708 Rhbdf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027709.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29954863 29962067 - MGP_WSBEiJ_P0027709 Rhbdf1 protein_coding protein_coding MGP_WSBEiJ_T0027710.1 MGP_WSBEiJ_G0017498.1 mouse_genomes_project 11 29955797 29962082 - MGP_WSBEiJ_P0027710 Rhbdf1 protein_coding protein_coding MGP_WSBEiJ_T0030111.1 MGP_WSBEiJ_G0018113.1 mouse_genomes_project 11 77975900 78006118 + MGP_WSBEiJ_P0030111 Nufip2 protein_coding protein_coding MGP_WSBEiJ_T0030112.1 MGP_WSBEiJ_G0018113.1 mouse_genomes_project 11 77975917 78038429 + MGP_WSBEiJ_P0030112 Nufip2 protein_coding protein_coding MGP_WSBEiJ_T0030113.1 MGP_WSBEiJ_G0018113.1 mouse_genomes_project 11 77977204 77982233 + Nufip2 protein_coding processed_transcript MGP_WSBEiJ_T0030114.1 MGP_WSBEiJ_G0018113.1 mouse_genomes_project 11 77977346 77982031 + Nufip2 protein_coding processed_transcript MGP_WSBEiJ_T0030279.1 MGP_WSBEiJ_G0018146.1 mouse_genomes_project 11 78878465 78891948 - MGP_WSBEiJ_P0030279 Tnfaip1 protein_coding protein_coding MGP_WSBEiJ_T0030280.1 MGP_WSBEiJ_G0018146.1 mouse_genomes_project 11 78878465 78892009 - MGP_WSBEiJ_P0030280 Tnfaip1 protein_coding protein_coding MGP_WSBEiJ_T0029011.1 MGP_WSBEiJ_G0017852.1 mouse_genomes_project 11 66887162 66936814 + MGP_WSBEiJ_P0029011 Myh13 protein_coding protein_coding MGP_WSBEiJ_T0029012.1 MGP_WSBEiJ_G0017852.1 mouse_genomes_project 11 66887284 66936814 + MGP_WSBEiJ_P0029012 Myh13 protein_coding protein_coding MGP_WSBEiJ_T0029013.1 MGP_WSBEiJ_G0017852.1 mouse_genomes_project 11 66892594 66936730 + MGP_WSBEiJ_P0029013 Myh13 protein_coding protein_coding MGP_WSBEiJ_T0029014.1 MGP_WSBEiJ_G0017852.1 mouse_genomes_project 11 66930047 66934432 + MGP_WSBEiJ_P0029014 Myh13 protein_coding protein_coding MGP_WSBEiJ_T0006234.1 MGP_WSBEiJ_G0005201.1 mouse_genomes_project 11 97652110 97666834 + Gm53 lincRNA lincRNA MGP_WSBEiJ_T0006235.1 MGP_WSBEiJ_G0005201.1 mouse_genomes_project 11 97652647 97667048 + Gm53 lincRNA lincRNA MGP_WSBEiJ_T0006236.1 MGP_WSBEiJ_G0005201.1 mouse_genomes_project 11 97653535 97664041 + Gm53 lincRNA lincRNA MGP_WSBEiJ_T0006237.1 MGP_WSBEiJ_G0005201.1 mouse_genomes_project 11 97663957 97667218 + Gm53 lincRNA lincRNA MGP_WSBEiJ_T0027601.1 MGP_WSBEiJ_G0017474.1 mouse_genomes_project 11 26873423 26900209 - MGP_WSBEiJ_P0027601 Cfap36 protein_coding protein_coding MGP_WSBEiJ_T0027602.1 MGP_WSBEiJ_G0017474.1 mouse_genomes_project 11 26878391 26900085 - Cfap36 protein_coding retained_intron MGP_WSBEiJ_T0027603.1 MGP_WSBEiJ_G0017474.1 mouse_genomes_project 11 26883210 26899719 - MGP_WSBEiJ_P0027603 Cfap36 protein_coding protein_coding MGP_WSBEiJ_T0027604.1 MGP_WSBEiJ_G0017474.1 mouse_genomes_project 11 26896603 26899865 - Cfap36 protein_coding retained_intron MGP_WSBEiJ_T0027605.1 MGP_WSBEiJ_G0017474.1 mouse_genomes_project 11 26897505 26899989 - Cfap36 protein_coding retained_intron MGP_WSBEiJ_T0028093.1 MGP_WSBEiJ_G0017612.1 mouse_genomes_project 11 48788972 48825350 - MGP_WSBEiJ_P0028093 Maml1 protein_coding protein_coding MGP_WSBEiJ_T0012327.1 MGP_WSBEiJ_G0010457.1 mouse_genomes_project 11 46880806 46882078 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031116.1 MGP_WSBEiJ_G0018367.1 mouse_genomes_project 11 97774855 97777331 + MGP_WSBEiJ_P0031116 Hoxb1 protein_coding protein_coding MGP_WSBEiJ_T0031117.1 MGP_WSBEiJ_G0018367.1 mouse_genomes_project 11 97775361 97776321 + Hoxb1 protein_coding processed_transcript MGP_WSBEiJ_T0029891.1 MGP_WSBEiJ_G0018064.1 mouse_genomes_project 11 75299313 75300307 - protein_coding processed_transcript MGP_WSBEiJ_T0028642.1 MGP_WSBEiJ_G0017773.1 mouse_genomes_project 11 59324003 59424369 + Rai1 protein_coding processed_transcript MGP_WSBEiJ_T0028643.1 MGP_WSBEiJ_G0017773.1 mouse_genomes_project 11 59324003 59424367 + MGP_WSBEiJ_P0028643 Rai1 protein_coding protein_coding MGP_WSBEiJ_T0028644.1 MGP_WSBEiJ_G0017773.1 mouse_genomes_project 11 59324167 59410603 + MGP_WSBEiJ_P0028644 Rai1 protein_coding protein_coding MGP_WSBEiJ_T0028645.1 MGP_WSBEiJ_G0017773.1 mouse_genomes_project 11 59362152 59424367 + MGP_WSBEiJ_P0028645 Rai1 protein_coding protein_coding MGP_WSBEiJ_T0028646.1 MGP_WSBEiJ_G0017773.1 mouse_genomes_project 11 59362154 59417197 + MGP_WSBEiJ_P0028646 Rai1 protein_coding protein_coding MGP_WSBEiJ_T0028647.1 MGP_WSBEiJ_G0017773.1 mouse_genomes_project 11 59362329 59364395 + Rai1 protein_coding processed_transcript MGP_WSBEiJ_T0028648.1 MGP_WSBEiJ_G0017773.1 mouse_genomes_project 11 59401053 59424369 + MGP_WSBEiJ_P0028648 Rai1 protein_coding protein_coding MGP_WSBEiJ_T0006141.1 MGP_WSBEiJ_G0005130.1 mouse_genomes_project 11 44900055 44951804 - lincRNA lincRNA MGP_WSBEiJ_T0003280.1 MGP_WSBEiJ_G0003028.1 mouse_genomes_project 11 120828411 120829828 - Gm11724 antisense antisense MGP_WSBEiJ_T0027711.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29965442 30008526 - MGP_WSBEiJ_P0027711 Nprl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027716.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29971074 29996181 - Nprl3 protein_coding processed_transcript MGP_WSBEiJ_T0027717.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29971074 30008526 - MGP_WSBEiJ_P0027717 Nprl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027718.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29971774 30008544 - MGP_WSBEiJ_P0027718 Nprl3 protein_coding protein_coding MGP_WSBEiJ_T0027719.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29971865 30008495 - MGP_WSBEiJ_P0027719 Nprl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027720.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29972746 29974204 - Nprl3 protein_coding retained_intron MGP_WSBEiJ_T0027721.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29972754 30008466 - MGP_WSBEiJ_P0027721 Nprl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027722.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29972762 30008384 - MGP_WSBEiJ_P0027722 Nprl3 protein_coding protein_coding MGP_WSBEiJ_T0027723.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29976649 29979743 - Nprl3 protein_coding retained_intron MGP_WSBEiJ_T0027724.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29976695 29977838 - Nprl3 protein_coding retained_intron MGP_WSBEiJ_T0027725.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29979601 29993827 - Nprl3 protein_coding retained_intron MGP_WSBEiJ_T0027726.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29979664 30008495 - MGP_WSBEiJ_P0027726 Nprl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027727.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29981458 29989951 - Nprl3 protein_coding processed_transcript MGP_WSBEiJ_T0027728.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29987551 29990051 - Nprl3 protein_coding processed_transcript MGP_WSBEiJ_T0027729.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 29989935 30008452 - MGP_WSBEiJ_P0027729 Nprl3 protein_coding protein_coding MGP_WSBEiJ_T0027730.1 MGP_WSBEiJ_G0017499.1 mouse_genomes_project 11 30003730 30008388 - Nprl3 protein_coding processed_transcript MGP_WSBEiJ_T0031370.1 MGP_WSBEiJ_G0018426.1 mouse_genomes_project 11 100340891 100355285 + MGP_WSBEiJ_P0031370 Psmd3 protein_coding protein_coding MGP_WSBEiJ_T0031371.1 MGP_WSBEiJ_G0018426.1 mouse_genomes_project 11 100340902 100351817 + Psmd3 protein_coding retained_intron MGP_WSBEiJ_T0031372.1 MGP_WSBEiJ_G0018426.1 mouse_genomes_project 11 100340928 100354355 + Psmd3 protein_coding retained_intron MGP_WSBEiJ_T0031373.1 MGP_WSBEiJ_G0018426.1 mouse_genomes_project 11 100346126 100353146 + MGP_WSBEiJ_P0031373 Psmd3 protein_coding protein_coding MGP_WSBEiJ_T0031374.1 MGP_WSBEiJ_G0018426.1 mouse_genomes_project 11 100349760 100350769 + Psmd3 protein_coding retained_intron MGP_WSBEiJ_T0030415.1 MGP_WSBEiJ_G0018183.1 mouse_genomes_project 11 82624524 82626339 + MGP_WSBEiJ_P0030415 Ccl7 protein_coding protein_coding MGP_WSBEiJ_T0032392.1 MGP_WSBEiJ_G0018685.1 mouse_genomes_project 11 111516602 111521562 - MGP_WSBEiJ_P0032392 E030025P04Rik protein_coding protein_coding MGP_WSBEiJ_T0032410.1 MGP_WSBEiJ_G0018690.1 mouse_genomes_project 11 111857062 111880059 - MGP_WSBEiJ_P0032410 Slc16a6 protein_coding protein_coding MGP_WSBEiJ_T0032411.1 MGP_WSBEiJ_G0018690.1 mouse_genomes_project 11 111858676 111879755 - MGP_WSBEiJ_P0032411 Slc16a6 protein_coding protein_coding MGP_WSBEiJ_T0032412.1 MGP_WSBEiJ_G0018690.1 mouse_genomes_project 11 111866759 111879148 - MGP_WSBEiJ_P0032412 Slc16a6 protein_coding protein_coding MGP_WSBEiJ_T0032413.1 MGP_WSBEiJ_G0018690.1 mouse_genomes_project 11 111873163 111879660 - Slc16a6 protein_coding processed_transcript MGP_WSBEiJ_T0100002.1 MGP_WSBEiJ_G0038646.1 mouse_genomes_project 11 120423638 120425216 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100003.1 MGP_WSBEiJ_G0038646.1 mouse_genomes_project 11 120423697 120424626 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0027917.1 MGP_WSBEiJ_G0017557.1 mouse_genomes_project 11 44430864 44451144 - MGP_WSBEiJ_P0027917 Nipal4 protein_coding protein_coding MGP_WSBEiJ_T0031366.1 MGP_WSBEiJ_G0018424.1 mouse_genomes_project 11 100271674 100273149 + protein_coding processed_transcript MGP_WSBEiJ_T0031367.1 MGP_WSBEiJ_G0018424.1 mouse_genomes_project 11 100272540 100311427 + protein_coding processed_transcript MGP_WSBEiJ_T0031368.1 MGP_WSBEiJ_G0018424.1 mouse_genomes_project 11 100290131 100290650 + protein_coding processed_transcript MGP_WSBEiJ_T0030683.1 MGP_WSBEiJ_G0018253.1 mouse_genomes_project 11 87517330 87527797 + MGP_WSBEiJ_P0030683 Ptrh2 protein_coding protein_coding MGP_WSBEiJ_T0030684.1 MGP_WSBEiJ_G0018253.1 mouse_genomes_project 11 87517330 87527797 + MGP_WSBEiJ_P0030684 Ptrh2 protein_coding protein_coding MGP_WSBEiJ_T0033194.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123268116 123316447 - MGP_WSBEiJ_P0033194 Slc38a10 protein_coding protein_coding MGP_WSBEiJ_T0033195.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123268116 123316447 - MGP_WSBEiJ_P0033195 Slc38a10 protein_coding protein_coding MGP_WSBEiJ_T0033196.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123268608 123316413 - MGP_WSBEiJ_P0033196 Slc38a10 protein_coding protein_coding MGP_WSBEiJ_T0033197.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123269777 123271145 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033198.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123269834 123272745 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033199.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123269948 123274603 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033200.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123269961 123274615 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033201.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123270029 123274484 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033202.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123272693 123274495 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033203.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123275160 123316380 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033204.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123282950 123316447 - MGP_WSBEiJ_P0033204 Slc38a10 protein_coding protein_coding MGP_WSBEiJ_T0033205.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123287922 123316447 - MGP_WSBEiJ_P0033205 Slc38a10 protein_coding protein_coding MGP_WSBEiJ_T0033206.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123297677 123316421 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033207.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123299960 123316388 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033208.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123303120 123316423 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0033209.1 MGP_WSBEiJ_G0018847.1 mouse_genomes_project 11 123304259 123307895 - Slc38a10 protein_coding processed_transcript MGP_WSBEiJ_T0012214.1 MGP_WSBEiJ_G0010344.1 mouse_genomes_project 11 2634646 2634923 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006233.1 MGP_WSBEiJ_G0005200.1 mouse_genomes_project 11 97571445 97572695 + Gm11535 lincRNA lincRNA MGP_WSBEiJ_T0016695.1 MGP_WSBEiJ_G0014642.1 mouse_genomes_project 11 123399312 123401096 - 2900052L18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0032174.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107351088 107461487 + MGP_WSBEiJ_P0032174 Tlk2 protein_coding protein_coding MGP_WSBEiJ_T0032175.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107353027 107383248 + Tlk2 protein_coding retained_intron MGP_WSBEiJ_T0032176.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107354979 107459710 + MGP_WSBEiJ_P0032176 Tlk2 protein_coding protein_coding MGP_WSBEiJ_T0032177.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107355105 107454004 + MGP_WSBEiJ_P0032177 Tlk2 protein_coding protein_coding MGP_WSBEiJ_T0032178.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107355229 107459709 + MGP_WSBEiJ_P0032178 Tlk2 protein_coding protein_coding MGP_WSBEiJ_T0032179.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107355294 107454418 + MGP_WSBEiJ_P0032179 Tlk2 protein_coding protein_coding MGP_WSBEiJ_T0032180.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107355311 107459709 + MGP_WSBEiJ_P0032180 Tlk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032181.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107355529 107383951 + MGP_WSBEiJ_P0032181 Tlk2 protein_coding protein_coding MGP_WSBEiJ_T0032182.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107380808 107417209 + Tlk2 protein_coding retained_intron MGP_WSBEiJ_T0032183.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107382245 107426060 + MGP_WSBEiJ_P0032183 Tlk2 protein_coding protein_coding MGP_WSBEiJ_T0032184.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107423331 107424248 + Tlk2 protein_coding retained_intron MGP_WSBEiJ_T0032185.1 MGP_WSBEiJ_G0018638.1 mouse_genomes_project 11 107429850 107447696 + Tlk2 protein_coding processed_transcript MGP_WSBEiJ_T0003285.1 MGP_WSBEiJ_G0003033.1 mouse_genomes_project 11 123089961 123096857 - Gm11767 antisense antisense MGP_WSBEiJ_T0031304.1 MGP_WSBEiJ_G0018409.1 mouse_genomes_project 11 99632136 99711013 - MGP_WSBEiJ_P0031304 Fbxl20 protein_coding protein_coding MGP_WSBEiJ_T0031305.1 MGP_WSBEiJ_G0018409.1 mouse_genomes_project 11 99642662 99711007 - Fbxl20 protein_coding retained_intron MGP_WSBEiJ_T0031306.1 MGP_WSBEiJ_G0018409.1 mouse_genomes_project 11 99647841 99652542 - MGP_WSBEiJ_P0031306 Fbxl20 protein_coding protein_coding MGP_WSBEiJ_T0031307.1 MGP_WSBEiJ_G0018409.1 mouse_genomes_project 11 99650896 99711804 - MGP_WSBEiJ_P0031307 Fbxl20 protein_coding protein_coding MGP_WSBEiJ_T0031308.1 MGP_WSBEiJ_G0018409.1 mouse_genomes_project 11 99654215 99689045 - Fbxl20 protein_coding processed_transcript MGP_WSBEiJ_T0031309.1 MGP_WSBEiJ_G0018409.1 mouse_genomes_project 11 99661974 99689045 - MGP_WSBEiJ_P0031309 Fbxl20 protein_coding protein_coding MGP_WSBEiJ_T0031310.1 MGP_WSBEiJ_G0018409.1 mouse_genomes_project 11 99688062 99689029 - Fbxl20 protein_coding processed_transcript MGP_WSBEiJ_T0030470.1 MGP_WSBEiJ_G0018199.1 mouse_genomes_project 11 83692104 83698667 + MGP_WSBEiJ_P0030470 Slfn2 protein_coding protein_coding MGP_WSBEiJ_T0027682.1 MGP_WSBEiJ_G0017491.1 mouse_genomes_project 11 29371728 29378227 - MGP_WSBEiJ_P0027682 Bod1 protein_coding protein_coding MGP_WSBEiJ_T0027683.1 MGP_WSBEiJ_G0017491.1 mouse_genomes_project 11 29373027 29378069 - MGP_WSBEiJ_P0027683 Bod1 protein_coding protein_coding MGP_WSBEiJ_T0012207.1 MGP_WSBEiJ_G0010337.1 mouse_genomes_project 11 534368 535265 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028354.1 MGP_WSBEiJ_G0017676.1 mouse_genomes_project 11 53050310 53052728 - MGP_WSBEiJ_P0028354 Csf2 protein_coding protein_coding MGP_WSBEiJ_T0029126.1 MGP_WSBEiJ_G0017876.1 mouse_genomes_project 11 68726190 68732383 + MGP_WSBEiJ_P0029126 Aurkb protein_coding protein_coding MGP_WSBEiJ_T0029127.1 MGP_WSBEiJ_G0017876.1 mouse_genomes_project 11 68726195 68732383 + MGP_WSBEiJ_P0029127 Aurkb protein_coding protein_coding MGP_WSBEiJ_T0029128.1 MGP_WSBEiJ_G0017876.1 mouse_genomes_project 11 68726214 68728938 + Aurkb protein_coding processed_transcript MGP_WSBEiJ_T0029129.1 MGP_WSBEiJ_G0017876.1 mouse_genomes_project 11 68726233 68729016 + Aurkb protein_coding retained_intron MGP_WSBEiJ_T0029130.1 MGP_WSBEiJ_G0017876.1 mouse_genomes_project 11 68728696 68729793 + Aurkb protein_coding retained_intron MGP_WSBEiJ_T0029131.1 MGP_WSBEiJ_G0017876.1 mouse_genomes_project 11 68729247 68729795 + Aurkb protein_coding retained_intron MGP_WSBEiJ_T0029132.1 MGP_WSBEiJ_G0017876.1 mouse_genomes_project 11 68729288 68731456 + Aurkb protein_coding retained_intron MGP_WSBEiJ_T0029133.1 MGP_WSBEiJ_G0017876.1 mouse_genomes_project 11 68731281 68731858 + Aurkb protein_coding processed_transcript MGP_WSBEiJ_T0009508.1 MGP_WSBEiJ_G0007665.1 mouse_genomes_project 11 18652104 18652192 - Mir1933 miRNA miRNA MGP_WSBEiJ_T0006126.1 MGP_WSBEiJ_G0005116.1 mouse_genomes_project 11 32761707 32763900 + Gm12711 lincRNA lincRNA MGP_WSBEiJ_T0009510.1 MGP_WSBEiJ_G0007667.1 mouse_genomes_project 11 22115041 22115185 - Gm25507 miRNA miRNA MGP_WSBEiJ_T0098899.1 MGP_WSBEiJ_G0037562.1 mouse_genomes_project 11 9783009 9783151 + Gm22156 snoRNA snoRNA MGP_WSBEiJ_T0098918.1 MGP_WSBEiJ_G0037581.1 mouse_genomes_project 11 50361232 50361376 - Gm25291 snoRNA snoRNA MGP_WSBEiJ_T0097705.1 MGP_WSBEiJ_G0036368.1 mouse_genomes_project 11 70849736 70849842 - Gm22297 snRNA snRNA MGP_WSBEiJ_T0006152.1 MGP_WSBEiJ_G0005140.1 mouse_genomes_project 11 57992370 57993513 + Gm12259 lincRNA lincRNA MGP_WSBEiJ_T0027745.1 MGP_WSBEiJ_G0017507.1 mouse_genomes_project 11 30602356 30607839 - MGP_WSBEiJ_P0027745 Smim23 protein_coding protein_coding MGP_WSBEiJ_T0027746.1 MGP_WSBEiJ_G0017507.1 mouse_genomes_project 11 30604199 30607882 - MGP_WSBEiJ_P0027746 Smim23 protein_coding protein_coding MGP_WSBEiJ_T0027514.1 MGP_WSBEiJ_G0017456.1 mouse_genomes_project 11 20701667 20898969 + MGP_WSBEiJ_P0027514 protein_coding protein_coding MGP_WSBEiJ_T0027515.1 MGP_WSBEiJ_G0017456.1 mouse_genomes_project 11 20701667 20899785 + MGP_WSBEiJ_P0027515 protein_coding protein_coding MGP_WSBEiJ_T0027516.1 MGP_WSBEiJ_G0017456.1 mouse_genomes_project 11 20822165 20828189 + protein_coding processed_transcript MGP_WSBEiJ_T0027517.1 MGP_WSBEiJ_G0017456.1 mouse_genomes_project 11 20827591 20865595 + MGP_WSBEiJ_P0027517 protein_coding protein_coding MGP_WSBEiJ_T0027518.1 MGP_WSBEiJ_G0017456.1 mouse_genomes_project 11 20866834 20869786 + protein_coding processed_transcript MGP_WSBEiJ_T0027519.1 MGP_WSBEiJ_G0017456.1 mouse_genomes_project 11 20866973 20869499 + protein_coding processed_transcript MGP_WSBEiJ_T0027520.1 MGP_WSBEiJ_G0017456.1 mouse_genomes_project 11 20879152 20897593 + MGP_WSBEiJ_P0027520 protein_coding protein_coding MGP_WSBEiJ_T0027521.1 MGP_WSBEiJ_G0017456.1 mouse_genomes_project 11 20896029 20896548 + protein_coding processed_transcript MGP_WSBEiJ_T0028449.1 MGP_WSBEiJ_G0017701.1 mouse_genomes_project 11 56458730 56476010 + MGP_WSBEiJ_P0028449 Mfap3 protein_coding protein_coding MGP_WSBEiJ_T0028450.1 MGP_WSBEiJ_G0017701.1 mouse_genomes_project 11 56458752 56471296 + Mfap3 protein_coding retained_intron MGP_WSBEiJ_T0028451.1 MGP_WSBEiJ_G0017701.1 mouse_genomes_project 11 56458753 56476009 + MGP_WSBEiJ_P0028451 Mfap3 protein_coding protein_coding MGP_WSBEiJ_T0028452.1 MGP_WSBEiJ_G0017701.1 mouse_genomes_project 11 56465087 56471724 + MGP_WSBEiJ_P0028452 Mfap3 protein_coding protein_coding MGP_WSBEiJ_T0030592.1 MGP_WSBEiJ_G0018235.1 mouse_genomes_project 11 85615951 85648336 + MGP_WSBEiJ_P0030592 Myo19 protein_coding protein_coding MGP_WSBEiJ_T0030593.1 MGP_WSBEiJ_G0018235.1 mouse_genomes_project 11 85615973 85618795 + Myo19 protein_coding processed_transcript MGP_WSBEiJ_T0030594.1 MGP_WSBEiJ_G0018235.1 mouse_genomes_project 11 85616023 85648232 + Myo19 protein_coding processed_transcript MGP_WSBEiJ_T0030595.1 MGP_WSBEiJ_G0018235.1 mouse_genomes_project 11 85616113 85616807 + Myo19 protein_coding processed_transcript MGP_WSBEiJ_T0030596.1 MGP_WSBEiJ_G0018235.1 mouse_genomes_project 11 85616156 85648241 + Myo19 protein_coding processed_transcript MGP_WSBEiJ_T0030597.1 MGP_WSBEiJ_G0018235.1 mouse_genomes_project 11 85616170 85629868 + MGP_WSBEiJ_P0030597 Myo19 protein_coding protein_coding MGP_WSBEiJ_T0030598.1 MGP_WSBEiJ_G0018235.1 mouse_genomes_project 11 85618389 85648232 + Myo19 protein_coding processed_transcript MGP_WSBEiJ_T0031388.1 MGP_WSBEiJ_G0018429.1 mouse_genomes_project 11 100403675 100418735 + Thra protein_coding processed_transcript MGP_WSBEiJ_T0031389.1 MGP_WSBEiJ_G0018429.1 mouse_genomes_project 11 100404848 100422954 + Thra protein_coding processed_transcript MGP_WSBEiJ_T0031390.1 MGP_WSBEiJ_G0018429.1 mouse_genomes_project 11 100404848 100436241 + MGP_WSBEiJ_P0031390 Thra protein_coding protein_coding MGP_WSBEiJ_T0031391.1 MGP_WSBEiJ_G0018429.1 mouse_genomes_project 11 100404910 100432387 + MGP_WSBEiJ_P0031391 Thra protein_coding protein_coding MGP_WSBEiJ_T0031392.1 MGP_WSBEiJ_G0018429.1 mouse_genomes_project 11 100405195 100422254 + MGP_WSBEiJ_P0031392 Thra protein_coding protein_coding MGP_WSBEiJ_T0031393.1 MGP_WSBEiJ_G0018429.1 mouse_genomes_project 11 100407265 100419042 + Thra protein_coding processed_transcript MGP_WSBEiJ_T0031394.1 MGP_WSBEiJ_G0018429.1 mouse_genomes_project 11 100418850 100435638 + MGP_WSBEiJ_P0031394 Thra protein_coding protein_coding MGP_WSBEiJ_T0016689.1 MGP_WSBEiJ_G0014637.1 mouse_genomes_project 11 120635386 120637970 + 2900041M22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0032906.1 MGP_WSBEiJ_G0018791.1 mouse_genomes_project 11 119576888 119592323 + MGP_WSBEiJ_P0032906 protein_coding protein_coding MGP_WSBEiJ_T0032907.1 MGP_WSBEiJ_G0018791.1 mouse_genomes_project 11 119576888 119592028 + MGP_WSBEiJ_P0032907 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032908.1 MGP_WSBEiJ_G0018791.1 mouse_genomes_project 11 119577209 119592325 + MGP_WSBEiJ_P0032908 protein_coding protein_coding MGP_WSBEiJ_T0032909.1 MGP_WSBEiJ_G0018791.1 mouse_genomes_project 11 119580452 119592323 + MGP_WSBEiJ_P0032909 protein_coding protein_coding MGP_WSBEiJ_T0032910.1 MGP_WSBEiJ_G0018791.1 mouse_genomes_project 11 119580500 119583476 + protein_coding retained_intron MGP_WSBEiJ_T0028373.1 MGP_WSBEiJ_G0017680.1 mouse_genomes_project 11 53248123 53334980 + MGP_WSBEiJ_P0028373 Fnip1 protein_coding protein_coding MGP_WSBEiJ_T0028374.1 MGP_WSBEiJ_G0017680.1 mouse_genomes_project 11 53276725 53316583 + MGP_WSBEiJ_P0028374 Fnip1 protein_coding protein_coding MGP_WSBEiJ_T0003075.1 MGP_WSBEiJ_G0002862.1 mouse_genomes_project 11 41731371 41732892 - Gm12150 antisense antisense MGP_WSBEiJ_T0031988.1 MGP_WSBEiJ_G0018595.1 mouse_genomes_project 11 104695633 104708470 + MGP_WSBEiJ_P0031988 Meioc protein_coding protein_coding MGP_WSBEiJ_T0031989.1 MGP_WSBEiJ_G0018595.1 mouse_genomes_project 11 104697505 104717283 + MGP_WSBEiJ_P0031989 Meioc protein_coding protein_coding MGP_WSBEiJ_T0031990.1 MGP_WSBEiJ_G0018595.1 mouse_genomes_project 11 104697540 104707286 + Meioc protein_coding processed_transcript MGP_WSBEiJ_T0012291.1 MGP_WSBEiJ_G0010421.1 mouse_genomes_project 11 28266897 28268491 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006135.1 MGP_WSBEiJ_G0005125.1 mouse_genomes_project 11 42787878 42792680 + 4930597A21Rik lincRNA lincRNA MGP_WSBEiJ_T0031418.1 MGP_WSBEiJ_G0018436.1 mouse_genomes_project 11 100618044 100669169 + MGP_WSBEiJ_P0031418 Rara protein_coding protein_coding MGP_WSBEiJ_T0031419.1 MGP_WSBEiJ_G0018436.1 mouse_genomes_project 11 100627982 100669169 + MGP_WSBEiJ_P0031419 Rara protein_coding protein_coding MGP_WSBEiJ_T0031420.1 MGP_WSBEiJ_G0018436.1 mouse_genomes_project 11 100628002 100669919 + MGP_WSBEiJ_P0031420 Rara protein_coding protein_coding MGP_WSBEiJ_T0031421.1 MGP_WSBEiJ_G0018436.1 mouse_genomes_project 11 100628612 100640551 + Rara protein_coding processed_transcript MGP_WSBEiJ_T0031422.1 MGP_WSBEiJ_G0018436.1 mouse_genomes_project 11 100630014 100669919 + MGP_WSBEiJ_P0031422 Rara protein_coding protein_coding MGP_WSBEiJ_T0031423.1 MGP_WSBEiJ_G0018436.1 mouse_genomes_project 11 100630015 100640680 + Rara protein_coding processed_transcript MGP_WSBEiJ_T0031424.1 MGP_WSBEiJ_G0018436.1 mouse_genomes_project 11 100655402 100669919 + MGP_WSBEiJ_P0031424 Rara protein_coding protein_coding MGP_WSBEiJ_T0029297.1 MGP_WSBEiJ_G0017916.1 mouse_genomes_project 11 69553653 69565461 - MGP_WSBEiJ_P0029297 Chrnb1 protein_coding protein_coding MGP_WSBEiJ_T0029298.1 MGP_WSBEiJ_G0017916.1 mouse_genomes_project 11 69562227 69563788 - Chrnb1 protein_coding retained_intron MGP_WSBEiJ_T0029299.1 MGP_WSBEiJ_G0017916.1 mouse_genomes_project 11 69562302 69563328 - Chrnb1 protein_coding retained_intron MGP_WSBEiJ_T0029300.1 MGP_WSBEiJ_G0017916.1 mouse_genomes_project 11 69563027 69565423 - Chrnb1 protein_coding processed_transcript MGP_WSBEiJ_T0029691.1 MGP_WSBEiJ_G0017996.1 mouse_genomes_project 11 72210626 72235353 - MGP_WSBEiJ_P0029691 Slc13a5 protein_coding protein_coding MGP_WSBEiJ_T0029692.1 MGP_WSBEiJ_G0017996.1 mouse_genomes_project 11 72229087 72235353 - MGP_WSBEiJ_P0029692 Slc13a5 protein_coding protein_coding MGP_WSBEiJ_T0029693.1 MGP_WSBEiJ_G0017996.1 mouse_genomes_project 11 72230392 72235973 - MGP_WSBEiJ_P0029693 Slc13a5 protein_coding protein_coding MGP_WSBEiJ_T0012511.1 MGP_WSBEiJ_G0010641.1 mouse_genomes_project 11 123976943 123980550 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003110.1 MGP_WSBEiJ_G0002894.1 mouse_genomes_project 11 59011572 59019950 + Gm16062 antisense antisense MGP_WSBEiJ_T0097709.1 MGP_WSBEiJ_G0036372.1 mouse_genomes_project 11 74843266 74843373 + Gm24211 snRNA snRNA MGP_WSBEiJ_T0097189.1 MGP_WSBEiJ_G0035870.1 mouse_genomes_project 11 9048354 9048482 - Gm25058 scaRNA scaRNA MGP_WSBEiJ_T0027801.1 MGP_WSBEiJ_G0017526.1 mouse_genomes_project 11 33754850 33906169 - MGP_WSBEiJ_P0027801 Wwc1 protein_coding protein_coding MGP_WSBEiJ_T0027802.1 MGP_WSBEiJ_G0017526.1 mouse_genomes_project 11 33768602 33769949 - Wwc1 protein_coding processed_transcript MGP_WSBEiJ_T0027803.1 MGP_WSBEiJ_G0017526.1 mouse_genomes_project 11 33787474 33793788 - Wwc1 protein_coding processed_transcript MGP_WSBEiJ_T0031001.1 MGP_WSBEiJ_G0018331.1 mouse_genomes_project 11 96315068 96330929 + MGP_WSBEiJ_P0031001 Ppp1r9b protein_coding protein_coding MGP_WSBEiJ_T0031002.1 MGP_WSBEiJ_G0018331.1 mouse_genomes_project 11 96316913 96325360 + Ppp1r9b protein_coding processed_transcript MGP_WSBEiJ_T0031003.1 MGP_WSBEiJ_G0018331.1 mouse_genomes_project 11 96320097 96330929 + MGP_WSBEiJ_P0031003 Ppp1r9b protein_coding protein_coding MGP_WSBEiJ_T0028612.1 MGP_WSBEiJ_G0017767.1 mouse_genomes_project 11 58993028 59011509 - MGP_WSBEiJ_P0028612 Flcn protein_coding protein_coding MGP_WSBEiJ_T0028613.1 MGP_WSBEiJ_G0017767.1 mouse_genomes_project 11 58993077 59011417 - Flcn protein_coding retained_intron MGP_WSBEiJ_T0028614.1 MGP_WSBEiJ_G0017767.1 mouse_genomes_project 11 58993410 59011081 - MGP_WSBEiJ_P0028614 Flcn protein_coding protein_coding MGP_WSBEiJ_T0028615.1 MGP_WSBEiJ_G0017767.1 mouse_genomes_project 11 59005259 59011094 - Flcn protein_coding processed_transcript MGP_WSBEiJ_T0028616.1 MGP_WSBEiJ_G0017767.1 mouse_genomes_project 11 59006016 59011487 - MGP_WSBEiJ_P0028616 Flcn protein_coding protein_coding MGP_WSBEiJ_T0028617.1 MGP_WSBEiJ_G0017767.1 mouse_genomes_project 11 59010520 59011204 - Flcn protein_coding retained_intron MGP_WSBEiJ_T0027554.1 MGP_WSBEiJ_G0017465.1 mouse_genomes_project 11 21500105 21604279 + MGP_WSBEiJ_P0027554 Bcl11a protein_coding protein_coding MGP_WSBEiJ_T0027555.1 MGP_WSBEiJ_G0017465.1 mouse_genomes_project 11 21500166 21605208 + MGP_WSBEiJ_P0027555 Bcl11a protein_coding protein_coding MGP_WSBEiJ_T0027556.1 MGP_WSBEiJ_G0017465.1 mouse_genomes_project 11 21500196 21514097 + Bcl11a protein_coding retained_intron MGP_WSBEiJ_T0027557.1 MGP_WSBEiJ_G0017465.1 mouse_genomes_project 11 21500222 21598800 + MGP_WSBEiJ_P0027557 Bcl11a protein_coding protein_coding MGP_WSBEiJ_T0027558.1 MGP_WSBEiJ_G0017465.1 mouse_genomes_project 11 21502719 21604643 + MGP_WSBEiJ_P0027558 Bcl11a protein_coding protein_coding MGP_WSBEiJ_T0027559.1 MGP_WSBEiJ_G0017465.1 mouse_genomes_project 11 21572832 21593664 + Bcl11a protein_coding processed_transcript MGP_WSBEiJ_T0012471.1 MGP_WSBEiJ_G0010601.1 mouse_genomes_project 11 104691065 104691863 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028194.1 MGP_WSBEiJ_G0017635.1 mouse_genomes_project 11 50267007 50276281 - MGP_WSBEiJ_P0028194 N4bp3 protein_coding protein_coding MGP_WSBEiJ_T0028195.1 MGP_WSBEiJ_G0017635.1 mouse_genomes_project 11 50269498 50276276 - MGP_WSBEiJ_P0028195 N4bp3 protein_coding protein_coding MGP_WSBEiJ_T0028196.1 MGP_WSBEiJ_G0017635.1 mouse_genomes_project 11 50269563 50276259 - MGP_WSBEiJ_P0028196 N4bp3 protein_coding protein_coding MGP_WSBEiJ_T0027828.1 MGP_WSBEiJ_G0017531.1 mouse_genomes_project 11 38823610 38830370 - MGP_WSBEiJ_P0027828 Ccng1 protein_coding protein_coding MGP_WSBEiJ_T0027829.1 MGP_WSBEiJ_G0017531.1 mouse_genomes_project 11 38824148 38828997 - Ccng1 protein_coding processed_transcript MGP_WSBEiJ_T0003105.1 MGP_WSBEiJ_G0002890.1 mouse_genomes_project 11 58032479 58034267 + Gm12257 antisense antisense MGP_WSBEiJ_T0030535.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84661587 84744052 + MGP_WSBEiJ_P0030535 Synrg protein_coding protein_coding MGP_WSBEiJ_T0030536.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84661587 84740431 + MGP_WSBEiJ_P0030536 Synrg protein_coding protein_coding MGP_WSBEiJ_T0030537.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84661635 84740405 + MGP_WSBEiJ_P0030537 Synrg protein_coding protein_coding MGP_WSBEiJ_T0030538.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84661635 84740405 + MGP_WSBEiJ_P0030538 Synrg protein_coding protein_coding MGP_WSBEiJ_T0030539.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84679210 84687773 + Synrg protein_coding processed_transcript MGP_WSBEiJ_T0030540.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84680070 84688845 + MGP_WSBEiJ_P0030540 Synrg protein_coding protein_coding MGP_WSBEiJ_T0030541.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84687772 84689261 + Synrg protein_coding retained_intron MGP_WSBEiJ_T0030542.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84717593 84740888 + Synrg protein_coding retained_intron MGP_WSBEiJ_T0030543.1 MGP_WSBEiJ_G0018224.1 mouse_genomes_project 11 84724901 84739487 + Synrg protein_coding retained_intron MGP_WSBEiJ_T0032246.1 MGP_WSBEiJ_G0018655.1 mouse_genomes_project 11 108465830 108472325 + MGP_WSBEiJ_P0032246 Psmc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032247.1 MGP_WSBEiJ_G0018655.1 mouse_genomes_project 11 108465830 108472325 + MGP_WSBEiJ_P0032247 Psmc5 protein_coding protein_coding MGP_WSBEiJ_T0033448.1 MGP_WSBEiJ_G0018898.1 mouse_genomes_project 11 124435225 124441923 - MGP_WSBEiJ_P0033448 BC017643 protein_coding protein_coding MGP_WSBEiJ_T0033449.1 MGP_WSBEiJ_G0018898.1 mouse_genomes_project 11 124435225 124441919 - MGP_WSBEiJ_P0033449 BC017643 protein_coding protein_coding MGP_WSBEiJ_T0033450.1 MGP_WSBEiJ_G0018898.1 mouse_genomes_project 11 124436301 124441400 - BC017643 protein_coding retained_intron MGP_WSBEiJ_T0033451.1 MGP_WSBEiJ_G0018898.1 mouse_genomes_project 11 124436584 124440019 - BC017643 protein_coding retained_intron MGP_WSBEiJ_T0033452.1 MGP_WSBEiJ_G0018898.1 mouse_genomes_project 11 124436863 124441709 - MGP_WSBEiJ_P0033452 BC017643 protein_coding protein_coding MGP_WSBEiJ_T0033453.1 MGP_WSBEiJ_G0018898.1 mouse_genomes_project 11 124437207 124441849 - MGP_WSBEiJ_P0033453 BC017643 protein_coding protein_coding MGP_WSBEiJ_T0033454.1 MGP_WSBEiJ_G0018898.1 mouse_genomes_project 11 124437234 124441936 - MGP_WSBEiJ_P0033454 BC017643 protein_coding protein_coding MGP_WSBEiJ_T0033455.1 MGP_WSBEiJ_G0018898.1 mouse_genomes_project 11 124439407 124441837 - BC017643 protein_coding processed_transcript MGP_WSBEiJ_T0016569.1 MGP_WSBEiJ_G0014572.1 mouse_genomes_project 11 16047511 16053781 - 8430419K02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016570.1 MGP_WSBEiJ_G0014572.1 mouse_genomes_project 11 16047615 16067965 - 8430419K02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0029725.1 MGP_WSBEiJ_G0018005.1 mouse_genomes_project 11 72594815 72678231 + MGP_WSBEiJ_P0029725 Ube2g1 protein_coding protein_coding MGP_WSBEiJ_T0029726.1 MGP_WSBEiJ_G0018005.1 mouse_genomes_project 11 72594815 72678231 + MGP_WSBEiJ_P0029726 Ube2g1 protein_coding protein_coding MGP_WSBEiJ_T0029727.1 MGP_WSBEiJ_G0018005.1 mouse_genomes_project 11 72594851 72671799 + Ube2g1 protein_coding retained_intron MGP_WSBEiJ_T0012334.1 MGP_WSBEiJ_G0010464.1 mouse_genomes_project 11 48883584 48883846 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030207.1 MGP_WSBEiJ_G0018129.1 mouse_genomes_project 11 78513955 78528458 + MGP_WSBEiJ_P0030207 Proca1 protein_coding protein_coding MGP_WSBEiJ_T0030208.1 MGP_WSBEiJ_G0018129.1 mouse_genomes_project 11 78515309 78528421 + MGP_WSBEiJ_P0030208 Proca1 protein_coding protein_coding MGP_WSBEiJ_T0030209.1 MGP_WSBEiJ_G0018129.1 mouse_genomes_project 11 78515339 78528717 + MGP_WSBEiJ_P0030209 Proca1 protein_coding protein_coding MGP_WSBEiJ_T0030210.1 MGP_WSBEiJ_G0018129.1 mouse_genomes_project 11 78527380 78528045 + Proca1 protein_coding processed_transcript MGP_WSBEiJ_T0029360.1 MGP_WSBEiJ_G0017932.1 mouse_genomes_project 11 69717104 69722912 + MGP_WSBEiJ_P0029360 Ybx2 protein_coding protein_coding MGP_WSBEiJ_T0029361.1 MGP_WSBEiJ_G0017932.1 mouse_genomes_project 11 69717222 69722883 + MGP_WSBEiJ_P0029361 Ybx2 protein_coding protein_coding MGP_WSBEiJ_T0029362.1 MGP_WSBEiJ_G0017932.1 mouse_genomes_project 11 69717635 69722904 + MGP_WSBEiJ_P0029362 Ybx2 protein_coding protein_coding MGP_WSBEiJ_T0029363.1 MGP_WSBEiJ_G0017932.1 mouse_genomes_project 11 69721153 69721969 + Ybx2 protein_coding retained_intron MGP_WSBEiJ_T0029364.1 MGP_WSBEiJ_G0017932.1 mouse_genomes_project 11 69721850 69722902 + Ybx2 protein_coding retained_intron MGP_WSBEiJ_T0000811.1 MGP_WSBEiJ_G0000750.1 mouse_genomes_project 11 16079447 16082616 - TEC TEC MGP_WSBEiJ_T0028697.1 MGP_WSBEiJ_G0017782.1 mouse_genomes_project 11 59912532 59916093 - MGP_WSBEiJ_P0028697 protein_coding protein_coding MGP_WSBEiJ_T0031410.1 MGP_WSBEiJ_G0018434.1 mouse_genomes_project 11 100547293 100578120 + MGP_WSBEiJ_P0031410 Wipf2 protein_coding protein_coding MGP_WSBEiJ_T0031411.1 MGP_WSBEiJ_G0018434.1 mouse_genomes_project 11 100547293 100593163 + MGP_WSBEiJ_P0031411 Wipf2 protein_coding protein_coding MGP_WSBEiJ_T0031412.1 MGP_WSBEiJ_G0018434.1 mouse_genomes_project 11 100547745 100578661 + Wipf2 protein_coding retained_intron MGP_WSBEiJ_T0031413.1 MGP_WSBEiJ_G0018434.1 mouse_genomes_project 11 100576993 100577918 + Wipf2 protein_coding retained_intron MGP_WSBEiJ_T0032151.1 MGP_WSBEiJ_G0018632.1 mouse_genomes_project 11 106716434 106719458 + MGP_WSBEiJ_P0032151 protein_coding protein_coding MGP_WSBEiJ_T0006095.1 MGP_WSBEiJ_G0005090.1 mouse_genomes_project 11 19944534 19957396 - Gm26829 lincRNA lincRNA MGP_WSBEiJ_T0030290.1 MGP_WSBEiJ_G0018150.1 mouse_genomes_project 11 79118798 79120022 - MGP_WSBEiJ_P0030290 Fam58b protein_coding protein_coding MGP_WSBEiJ_T0016687.1 MGP_WSBEiJ_G0014635.1 mouse_genomes_project 11 116918084 116919026 + 1700092K14Rik processed_transcript processed_transcript MGP_WSBEiJ_T0009598.1 MGP_WSBEiJ_G0007755.1 mouse_genomes_project 11 102304124 102304194 - Mir7116 miRNA miRNA MGP_WSBEiJ_T0006115.1 MGP_WSBEiJ_G0005106.1 mouse_genomes_project 11 27255083 27256958 + Gm12088 lincRNA lincRNA MGP_WSBEiJ_T0029074.1 MGP_WSBEiJ_G0017867.1 mouse_genomes_project 11 68471977 68510473 - MGP_WSBEiJ_P0029074 Ndel1 protein_coding protein_coding MGP_WSBEiJ_T0029075.1 MGP_WSBEiJ_G0017867.1 mouse_genomes_project 11 68472653 68492859 - Ndel1 protein_coding processed_transcript MGP_WSBEiJ_T0029076.1 MGP_WSBEiJ_G0017867.1 mouse_genomes_project 11 68480875 68530167 - MGP_WSBEiJ_P0029076 Ndel1 protein_coding protein_coding MGP_WSBEiJ_T0029077.1 MGP_WSBEiJ_G0017867.1 mouse_genomes_project 11 68480890 68510379 - MGP_WSBEiJ_P0029077 Ndel1 protein_coding protein_coding MGP_WSBEiJ_T0029078.1 MGP_WSBEiJ_G0017867.1 mouse_genomes_project 11 68488651 68517323 - Ndel1 protein_coding processed_transcript MGP_WSBEiJ_T0029079.1 MGP_WSBEiJ_G0017867.1 mouse_genomes_project 11 68492852 68522322 - Ndel1 protein_coding processed_transcript MGP_WSBEiJ_T0031081.1 MGP_WSBEiJ_G0018352.1 mouse_genomes_project 11 97406140 97414370 + MGP_WSBEiJ_P0031081 Gip protein_coding protein_coding MGP_WSBEiJ_T0031082.1 MGP_WSBEiJ_G0018352.1 mouse_genomes_project 11 97406641 97414370 + MGP_WSBEiJ_P0031082 Gip protein_coding protein_coding MGP_WSBEiJ_T0030060.1 MGP_WSBEiJ_G0018102.1 mouse_genomes_project 11 77235618 77269365 + MGP_WSBEiJ_P0030060 Slc6a4 protein_coding protein_coding MGP_WSBEiJ_T0030061.1 MGP_WSBEiJ_G0018102.1 mouse_genomes_project 11 77235631 77269366 + MGP_WSBEiJ_P0030061 Slc6a4 protein_coding protein_coding MGP_WSBEiJ_T0030062.1 MGP_WSBEiJ_G0018102.1 mouse_genomes_project 11 77245772 77249540 + MGP_WSBEiJ_P0030062 Slc6a4 protein_coding protein_coding MGP_WSBEiJ_T0030063.1 MGP_WSBEiJ_G0018102.1 mouse_genomes_project 11 77255335 77259475 + Slc6a4 protein_coding retained_intron MGP_WSBEiJ_T0029574.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70498440 70518243 - MGP_WSBEiJ_P0029574 Camta2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029575.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70498440 70519797 - MGP_WSBEiJ_P0029575 Camta2 protein_coding protein_coding MGP_WSBEiJ_T0029576.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70498440 70519959 - MGP_WSBEiJ_P0029576 Camta2 protein_coding protein_coding MGP_WSBEiJ_T0029577.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70498440 70519797 - MGP_WSBEiJ_P0029577 Camta2 protein_coding protein_coding MGP_WSBEiJ_T0029578.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70498440 70519807 - MGP_WSBEiJ_P0029578 Camta2 protein_coding protein_coding MGP_WSBEiJ_T0029579.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70498440 70519826 - MGP_WSBEiJ_P0029579 Camta2 protein_coding protein_coding MGP_WSBEiJ_T0029580.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70498441 70519809 - MGP_WSBEiJ_P0029580 Camta2 protein_coding protein_coding MGP_WSBEiJ_T0029581.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70498443 70515630 - Camta2 protein_coding retained_intron MGP_WSBEiJ_T0029582.1 MGP_WSBEiJ_G0017974.1 mouse_genomes_project 11 70517767 70519802 - Camta2 protein_coding retained_intron MGP_WSBEiJ_T0032064.1 MGP_WSBEiJ_G0018610.1 mouse_genomes_project 11 105176980 105180693 + MGP_WSBEiJ_P0032064 Hexim1 protein_coding protein_coding MGP_WSBEiJ_T0028437.1 MGP_WSBEiJ_G0017697.1 mouse_genomes_project 11 54397823 54497188 - MGP_WSBEiJ_P0028437 Glra1 protein_coding protein_coding MGP_WSBEiJ_T0028438.1 MGP_WSBEiJ_G0017697.1 mouse_genomes_project 11 54397823 54497100 - MGP_WSBEiJ_P0028438 Glra1 protein_coding protein_coding MGP_WSBEiJ_T0028439.1 MGP_WSBEiJ_G0017697.1 mouse_genomes_project 11 54397823 54497565 - MGP_WSBEiJ_P0028439 Glra1 protein_coding protein_coding MGP_WSBEiJ_T0033242.1 MGP_WSBEiJ_G0018857.1 mouse_genomes_project 11 123633865 123640377 + MGP_WSBEiJ_P0033242 Ccdc137 protein_coding protein_coding MGP_WSBEiJ_T0033243.1 MGP_WSBEiJ_G0018857.1 mouse_genomes_project 11 123633876 123635131 + Ccdc137 protein_coding processed_transcript MGP_WSBEiJ_T0033244.1 MGP_WSBEiJ_G0018857.1 mouse_genomes_project 11 123633888 123634606 + Ccdc137 protein_coding retained_intron MGP_WSBEiJ_T0033245.1 MGP_WSBEiJ_G0018857.1 mouse_genomes_project 11 123633892 123635869 + MGP_WSBEiJ_P0033245 Ccdc137 protein_coding protein_coding MGP_WSBEiJ_T0033246.1 MGP_WSBEiJ_G0018857.1 mouse_genomes_project 11 123633897 123638439 + MGP_WSBEiJ_P0033246 Ccdc137 protein_coding protein_coding MGP_WSBEiJ_T0033247.1 MGP_WSBEiJ_G0018857.1 mouse_genomes_project 11 123633936 123635762 + Ccdc137 protein_coding processed_transcript MGP_WSBEiJ_T0033248.1 MGP_WSBEiJ_G0018857.1 mouse_genomes_project 11 123635562 123638555 + Ccdc137 protein_coding retained_intron MGP_WSBEiJ_T0033249.1 MGP_WSBEiJ_G0018857.1 mouse_genomes_project 11 123638488 123640376 + Ccdc137 protein_coding processed_transcript MGP_WSBEiJ_T0098912.1 MGP_WSBEiJ_G0037575.1 mouse_genomes_project 11 33104499 33104636 + Gm26070 snoRNA snoRNA MGP_WSBEiJ_T0006094.1 MGP_WSBEiJ_G0005089.1 mouse_genomes_project 11 19828180 19834689 + Gm12051 lincRNA lincRNA MGP_WSBEiJ_T0030027.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76636577 76737923 - MGP_WSBEiJ_P0030027 Abr protein_coding protein_coding MGP_WSBEiJ_T0030028.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76636577 76794623 - MGP_WSBEiJ_P0030028 Abr protein_coding protein_coding MGP_WSBEiJ_T0030029.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76636578 76737499 - MGP_WSBEiJ_P0030029 Abr protein_coding protein_coding MGP_WSBEiJ_T0030030.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76636590 76737673 - MGP_WSBEiJ_P0030030 Abr protein_coding unknown_likely_coding MGP_WSBEiJ_T0030031.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76636594 76689496 - MGP_WSBEiJ_P0030031 Abr protein_coding protein_coding MGP_WSBEiJ_T0030032.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76638947 76718054 - MGP_WSBEiJ_P0030032 Abr protein_coding protein_coding MGP_WSBEiJ_T0030033.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76642879 76657076 - Abr protein_coding processed_transcript MGP_WSBEiJ_T0030034.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76675478 76689330 - MGP_WSBEiJ_P0030034 Abr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030035.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76679412 76717254 - Abr protein_coding retained_intron MGP_WSBEiJ_T0030036.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76685293 76716172 - MGP_WSBEiJ_P0030036 Abr protein_coding protein_coding MGP_WSBEiJ_T0030037.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76701598 76800831 - MGP_WSBEiJ_P0030037 Abr protein_coding protein_coding MGP_WSBEiJ_T0030038.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76701652 76848302 - MGP_WSBEiJ_P0030038 Abr protein_coding protein_coding MGP_WSBEiJ_T0030039.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76701708 76839377 - MGP_WSBEiJ_P0030039 Abr protein_coding protein_coding MGP_WSBEiJ_T0030040.1 MGP_WSBEiJ_G0018095.1 mouse_genomes_project 11 76708331 76717233 - Abr protein_coding processed_transcript MGP_WSBEiJ_T0029799.1 MGP_WSBEiJ_G0018028.1 mouse_genomes_project 11 73554987 73560639 - MGP_WSBEiJ_P0029799 protein_coding protein_coding MGP_WSBEiJ_T0028626.1 MGP_WSBEiJ_G0017769.1 mouse_genomes_project 11 59040670 59082031 + Nt5m protein_coding processed_transcript MGP_WSBEiJ_T0028627.1 MGP_WSBEiJ_G0017769.1 mouse_genomes_project 11 59040670 59086434 + Nt5m protein_coding processed_transcript MGP_WSBEiJ_T0028628.1 MGP_WSBEiJ_G0017769.1 mouse_genomes_project 11 59049292 59082031 + MGP_WSBEiJ_P0028628 Nt5m protein_coding protein_coding MGP_WSBEiJ_T0028629.1 MGP_WSBEiJ_G0017769.1 mouse_genomes_project 11 59049323 59082031 + Nt5m protein_coding processed_transcript MGP_WSBEiJ_T0100485.1 MGP_WSBEiJ_G0038944.1 mouse_genomes_project 11 84360759 84361587 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012425.1 MGP_WSBEiJ_G0010555.1 mouse_genomes_project 11 83361640 83362045 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027843.1 MGP_WSBEiJ_G0017535.1 mouse_genomes_project 11 40508733 40732240 + MGP_WSBEiJ_P0027843 Gabrb2 protein_coding protein_coding MGP_WSBEiJ_T0027844.1 MGP_WSBEiJ_G0017535.1 mouse_genomes_project 11 40508740 40512221 + Gabrb2 protein_coding processed_transcript MGP_WSBEiJ_T0027845.1 MGP_WSBEiJ_G0017535.1 mouse_genomes_project 11 40510861 40579550 + Gabrb2 protein_coding processed_transcript MGP_WSBEiJ_T0027846.1 MGP_WSBEiJ_G0017535.1 mouse_genomes_project 11 40510892 40626583 + Gabrb2 protein_coding processed_transcript MGP_WSBEiJ_T0027847.1 MGP_WSBEiJ_G0017535.1 mouse_genomes_project 11 40510932 40730103 + MGP_WSBEiJ_P0027847 Gabrb2 protein_coding protein_coding MGP_WSBEiJ_T0028414.1 MGP_WSBEiJ_G0017689.1 mouse_genomes_project 11 53948479 53963328 + MGP_WSBEiJ_P0028414 Gm2a protein_coding protein_coding MGP_WSBEiJ_T0031330.1 MGP_WSBEiJ_G0018414.1 mouse_genomes_project 11 99938558 99961073 + MGP_WSBEiJ_P0031330 Stard3 protein_coding protein_coding MGP_WSBEiJ_T0031331.1 MGP_WSBEiJ_G0018414.1 mouse_genomes_project 11 99938589 99956803 + Stard3 protein_coding processed_transcript MGP_WSBEiJ_T0031332.1 MGP_WSBEiJ_G0018414.1 mouse_genomes_project 11 99938590 99961086 + Stard3 protein_coding processed_transcript MGP_WSBEiJ_T0031333.1 MGP_WSBEiJ_G0018414.1 mouse_genomes_project 11 99938603 99956808 + Stard3 protein_coding processed_transcript MGP_WSBEiJ_T0031334.1 MGP_WSBEiJ_G0018414.1 mouse_genomes_project 11 99955492 99958621 + Stard3 protein_coding processed_transcript MGP_WSBEiJ_T0031335.1 MGP_WSBEiJ_G0018414.1 mouse_genomes_project 11 99956419 99958202 + Stard3 protein_coding processed_transcript MGP_WSBEiJ_T0031336.1 MGP_WSBEiJ_G0018414.1 mouse_genomes_project 11 99958128 99959321 + Stard3 protein_coding processed_transcript MGP_WSBEiJ_T0032781.1 MGP_WSBEiJ_G0018768.1 mouse_genomes_project 11 118938478 118954853 - MGP_WSBEiJ_P0032781 Unc13d protein_coding protein_coding MGP_WSBEiJ_T0032782.1 MGP_WSBEiJ_G0018768.1 mouse_genomes_project 11 118938479 118955064 - MGP_WSBEiJ_P0032782 Unc13d protein_coding protein_coding MGP_WSBEiJ_T0032783.1 MGP_WSBEiJ_G0018768.1 mouse_genomes_project 11 118938479 118955064 - MGP_WSBEiJ_P0032783 Unc13d protein_coding protein_coding MGP_WSBEiJ_T0032784.1 MGP_WSBEiJ_G0018768.1 mouse_genomes_project 11 118938959 118954728 - MGP_WSBEiJ_P0032784 Unc13d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032785.1 MGP_WSBEiJ_G0018768.1 mouse_genomes_project 11 118939043 118954694 - MGP_WSBEiJ_P0032785 Unc13d protein_coding protein_coding MGP_WSBEiJ_T0032786.1 MGP_WSBEiJ_G0018768.1 mouse_genomes_project 11 118945877 118947438 - Unc13d protein_coding retained_intron MGP_WSBEiJ_T0032787.1 MGP_WSBEiJ_G0018768.1 mouse_genomes_project 11 118953211 118954155 - MGP_WSBEiJ_P0032787 Unc13d protein_coding protein_coding MGP_WSBEiJ_T0032788.1 MGP_WSBEiJ_G0018768.1 mouse_genomes_project 11 118953574 118955044 - MGP_WSBEiJ_P0032788 Unc13d protein_coding protein_coding MGP_WSBEiJ_T0012306.1 MGP_WSBEiJ_G0010436.1 mouse_genomes_project 11 33923036 33923772 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009531.1 MGP_WSBEiJ_G0007688.1 mouse_genomes_project 11 52137208 52137279 + Mir6920 miRNA miRNA MGP_WSBEiJ_T0006240.1 MGP_WSBEiJ_G0005203.1 mouse_genomes_project 11 99418243 99427984 + Gm11630 lincRNA lincRNA MGP_WSBEiJ_T0016575.1 MGP_WSBEiJ_G0014577.1 mouse_genomes_project 11 20906985 20909325 + processed_transcript processed_transcript MGP_WSBEiJ_T0016576.1 MGP_WSBEiJ_G0014577.1 mouse_genomes_project 11 20906989 20910341 + processed_transcript processed_transcript MGP_WSBEiJ_T0016577.1 MGP_WSBEiJ_G0014577.1 mouse_genomes_project 11 20907015 20909872 + processed_transcript processed_transcript MGP_WSBEiJ_T0016578.1 MGP_WSBEiJ_G0014577.1 mouse_genomes_project 11 20909530 20910324 + processed_transcript processed_transcript MGP_WSBEiJ_T0012370.1 MGP_WSBEiJ_G0010500.1 mouse_genomes_project 11 60698506 60698898 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003254.1 MGP_WSBEiJ_G0003010.1 mouse_genomes_project 11 110883207 110887769 - Cep112os1 antisense antisense MGP_WSBEiJ_T0006199.1 MGP_WSBEiJ_G0005176.1 mouse_genomes_project 11 82561562 82564908 + Gm11419 lincRNA lincRNA MGP_WSBEiJ_T0031560.1 MGP_WSBEiJ_G0018512.1 mouse_genomes_project 11 102302098 102354614 - MGP_WSBEiJ_P0031560 Acly protein_coding protein_coding MGP_WSBEiJ_T0031561.1 MGP_WSBEiJ_G0018512.1 mouse_genomes_project 11 102302101 102354614 - MGP_WSBEiJ_P0031561 Acly protein_coding protein_coding MGP_WSBEiJ_T0031562.1 MGP_WSBEiJ_G0018512.1 mouse_genomes_project 11 102302103 102350213 - MGP_WSBEiJ_P0031562 Acly protein_coding protein_coding MGP_WSBEiJ_T0031563.1 MGP_WSBEiJ_G0018512.1 mouse_genomes_project 11 102302971 102305225 - Acly protein_coding processed_transcript MGP_WSBEiJ_T0031564.1 MGP_WSBEiJ_G0018512.1 mouse_genomes_project 11 102309124 102321067 - Acly protein_coding processed_transcript MGP_WSBEiJ_T0031565.1 MGP_WSBEiJ_G0018512.1 mouse_genomes_project 11 102324871 102325722 - Acly protein_coding processed_transcript MGP_WSBEiJ_T0031566.1 MGP_WSBEiJ_G0018512.1 mouse_genomes_project 11 102327202 102354483 - MGP_WSBEiJ_P0031566 Acly protein_coding protein_coding MGP_WSBEiJ_T0097674.1 MGP_WSBEiJ_G0036337.1 mouse_genomes_project 11 4934475 4934537 - Gm27393 snRNA snRNA MGP_WSBEiJ_T0016596.1 MGP_WSBEiJ_G0014590.1 mouse_genomes_project 11 58368839 58371180 - 2610507I01Rik processed_transcript processed_transcript MGP_WSBEiJ_T0098962.1 MGP_WSBEiJ_G0037625.1 mouse_genomes_project 11 119598527 119598601 + Snord1a snoRNA snoRNA MGP_WSBEiJ_T0012285.1 MGP_WSBEiJ_G0010415.1 mouse_genomes_project 11 27215727 27216663 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032357.1 MGP_WSBEiJ_G0018679.1 mouse_genomes_project 11 110214663 110225360 - MGP_WSBEiJ_P0032357 Cacng5 protein_coding protein_coding MGP_WSBEiJ_T0030254.1 MGP_WSBEiJ_G0018139.1 mouse_genomes_project 11 78744894 78769941 - MGP_WSBEiJ_P0030254 Slc13a2 protein_coding protein_coding MGP_WSBEiJ_T0031860.1 MGP_WSBEiJ_G0018576.1 mouse_genomes_project 11 104129858 104133822 + Nags protein_coding processed_transcript MGP_WSBEiJ_T0031861.1 MGP_WSBEiJ_G0018576.1 mouse_genomes_project 11 104129894 104133822 + MGP_WSBEiJ_P0031861 Nags protein_coding protein_coding MGP_WSBEiJ_T0031862.1 MGP_WSBEiJ_G0018576.1 mouse_genomes_project 11 104130711 104133822 + Nags protein_coding processed_transcript MGP_WSBEiJ_T0006168.1 MGP_WSBEiJ_G0005154.1 mouse_genomes_project 11 66493159 66502305 + lincRNA lincRNA MGP_WSBEiJ_T0006169.1 MGP_WSBEiJ_G0005154.1 mouse_genomes_project 11 66494398 66502808 + lincRNA lincRNA MGP_WSBEiJ_T0009551.1 MGP_WSBEiJ_G0007708.1 mouse_genomes_project 11 69764233 69764356 + Gm44349 miRNA miRNA MGP_WSBEiJ_T0030103.1 MGP_WSBEiJ_G0018110.1 mouse_genomes_project 11 77783365 77790397 + MGP_WSBEiJ_P0030103 Abhd15 protein_coding protein_coding MGP_WSBEiJ_T0030104.1 MGP_WSBEiJ_G0018110.1 mouse_genomes_project 11 77784228 77810418 + MGP_WSBEiJ_P0030104 Abhd15 protein_coding protein_coding MGP_WSBEiJ_T0030106.1 MGP_WSBEiJ_G0018110.1 mouse_genomes_project 11 77788971 77810416 + MGP_WSBEiJ_P0030106 Abhd15 protein_coding protein_coding MGP_WSBEiJ_T0028586.1 MGP_WSBEiJ_G0017759.1 mouse_genomes_project 11 58636259 58644538 + MGP_WSBEiJ_P0028586 Jmjd4 protein_coding protein_coding MGP_WSBEiJ_T0028587.1 MGP_WSBEiJ_G0017759.1 mouse_genomes_project 11 58636259 58644632 + MGP_WSBEiJ_P0028587 Jmjd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028588.1 MGP_WSBEiJ_G0017759.1 mouse_genomes_project 11 58636259 58644538 + MGP_WSBEiJ_P0028588 Jmjd4 protein_coding protein_coding MGP_WSBEiJ_T0028589.1 MGP_WSBEiJ_G0017759.1 mouse_genomes_project 11 58636335 58642171 + Jmjd4 protein_coding retained_intron MGP_WSBEiJ_T0003206.1 MGP_WSBEiJ_G0002969.1 mouse_genomes_project 11 98634879 98635565 + Gm11583 antisense antisense MGP_WSBEiJ_T0100477.1 MGP_WSBEiJ_G0038936.1 mouse_genomes_project 11 73680057 73680996 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009522.1 MGP_WSBEiJ_G0007679.1 mouse_genomes_project 11 44381692 44381813 + Mir8100 miRNA miRNA MGP_WSBEiJ_T0027046.1 MGP_WSBEiJ_G0017347.1 mouse_genomes_project 11 1030294 1052491 + MGP_WSBEiJ_P0027046 Sf3a1 protein_coding protein_coding MGP_WSBEiJ_T0027047.1 MGP_WSBEiJ_G0017347.1 mouse_genomes_project 11 1030299 1043060 + Sf3a1 protein_coding processed_transcript MGP_WSBEiJ_T0027048.1 MGP_WSBEiJ_G0017347.1 mouse_genomes_project 11 1030299 1041871 + Sf3a1 protein_coding retained_intron MGP_WSBEiJ_T0027049.1 MGP_WSBEiJ_G0017347.1 mouse_genomes_project 11 1047497 1049369 + Sf3a1 protein_coding retained_intron MGP_WSBEiJ_T0012292.1 MGP_WSBEiJ_G0010422.1 mouse_genomes_project 11 28413982 28414720 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097264.1 MGP_WSBEiJ_G0035944.1 mouse_genomes_project 11 33250313 33251030 + Gm12122 sense_intronic sense_intronic MGP_WSBEiJ_T0031489.1 MGP_WSBEiJ_G0018476.1 mouse_genomes_project 11 101540195 101541178 - MGP_WSBEiJ_P0031489 Krtap4-8 protein_coding protein_coding MGP_WSBEiJ_T0012312.1 MGP_WSBEiJ_G0010442.1 mouse_genomes_project 11 38657112 38658328 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012437.1 MGP_WSBEiJ_G0010567.1 mouse_genomes_project 11 88863279 88863691 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031652.1 MGP_WSBEiJ_G0018530.1 mouse_genomes_project 11 102940473 102949528 + MGP_WSBEiJ_P0031652 Naglu protein_coding protein_coding MGP_WSBEiJ_T0031653.1 MGP_WSBEiJ_G0018530.1 mouse_genomes_project 11 102942013 102948427 + Naglu protein_coding processed_transcript MGP_WSBEiJ_T0031654.1 MGP_WSBEiJ_G0018530.1 mouse_genomes_project 11 102942415 102948662 + Naglu protein_coding processed_transcript MGP_WSBEiJ_T0029706.1 MGP_WSBEiJ_G0018001.1 mouse_genomes_project 11 72417363 72419915 + MGP_WSBEiJ_P0029706 Ggt6 protein_coding protein_coding MGP_WSBEiJ_T0029707.1 MGP_WSBEiJ_G0018001.1 mouse_genomes_project 11 72417368 72419913 + MGP_WSBEiJ_P0029707 Ggt6 protein_coding protein_coding MGP_WSBEiJ_T0006222.1 MGP_WSBEiJ_G0005191.1 mouse_genomes_project 11 90125058 90127345 - Gm11497 lincRNA lincRNA MGP_WSBEiJ_T0030465.1 MGP_WSBEiJ_G0018197.1 mouse_genomes_project 11 83577939 83578761 + Slfn5 protein_coding processed_transcript MGP_WSBEiJ_T0030466.1 MGP_WSBEiJ_G0018197.1 mouse_genomes_project 11 83578685 83587445 + MGP_WSBEiJ_P0030466 Slfn5 protein_coding protein_coding MGP_WSBEiJ_T0030467.1 MGP_WSBEiJ_G0018197.1 mouse_genomes_project 11 83578692 83590392 + MGP_WSBEiJ_P0030467 Slfn5 protein_coding protein_coding MGP_WSBEiJ_T0030468.1 MGP_WSBEiJ_G0018197.1 mouse_genomes_project 11 83581232 83589339 + MGP_WSBEiJ_P0030468 Slfn5 protein_coding protein_coding MGP_WSBEiJ_T0028188.1 MGP_WSBEiJ_G0017633.1 mouse_genomes_project 11 50243132 50247115 + MGP_WSBEiJ_P0028188 Nhp2 protein_coding protein_coding MGP_WSBEiJ_T0028189.1 MGP_WSBEiJ_G0017633.1 mouse_genomes_project 11 50243168 50246835 + Nhp2 protein_coding retained_intron MGP_WSBEiJ_T0027413.1 MGP_WSBEiJ_G0017432.1 mouse_genomes_project 11 17173691 17276876 + MGP_WSBEiJ_P0027413 Spred2 protein_coding protein_coding MGP_WSBEiJ_T0027414.1 MGP_WSBEiJ_G0017432.1 mouse_genomes_project 11 17173758 17274653 + MGP_WSBEiJ_P0027414 Spred2 protein_coding protein_coding MGP_WSBEiJ_T0027415.1 MGP_WSBEiJ_G0017432.1 mouse_genomes_project 11 17203911 17270229 + MGP_WSBEiJ_P0027415 Spred2 protein_coding protein_coding MGP_WSBEiJ_T0012278.1 MGP_WSBEiJ_G0010408.1 mouse_genomes_project 11 25032277 25032753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030430.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398561 83420871 + MGP_WSBEiJ_P0030430 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0030431.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398588 83422286 + MGP_WSBEiJ_P0030431 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0030432.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398595 83414512 + Lig3 protein_coding retained_intron MGP_WSBEiJ_T0030433.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398638 83418662 + MGP_WSBEiJ_P0030433 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0030434.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398646 83420034 + MGP_WSBEiJ_P0030434 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0030435.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398646 83420035 + MGP_WSBEiJ_P0030435 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0030436.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398651 83407765 + MGP_WSBEiJ_P0030436 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0030437.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398651 83407766 + MGP_WSBEiJ_P0030437 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0030438.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83398656 83422210 + MGP_WSBEiJ_P0030438 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0030439.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83413344 83417554 + Lig3 protein_coding retained_intron MGP_WSBEiJ_T0030440.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83415214 83417571 + Lig3 protein_coding retained_intron MGP_WSBEiJ_T0030441.1 MGP_WSBEiJ_G0018191.1 mouse_genomes_project 11 83416345 83422286 + MGP_WSBEiJ_P0030441 Lig3 protein_coding protein_coding MGP_WSBEiJ_T0032105.1 MGP_WSBEiJ_G0018621.1 mouse_genomes_project 11 105770481 105792634 - MGP_WSBEiJ_P0032105 Gosr2 protein_coding protein_coding MGP_WSBEiJ_T0032106.1 MGP_WSBEiJ_G0018621.1 mouse_genomes_project 11 105773283 105792430 - MGP_WSBEiJ_P0032106 Gosr2 protein_coding protein_coding MGP_WSBEiJ_T0032107.1 MGP_WSBEiJ_G0018621.1 mouse_genomes_project 11 105773490 105792434 - Gosr2 protein_coding processed_transcript MGP_WSBEiJ_T0003231.1 MGP_WSBEiJ_G0002989.1 mouse_genomes_project 11 104129894 104130592 - Gm11586 antisense antisense MGP_WSBEiJ_T0016562.1 MGP_WSBEiJ_G0014571.1 mouse_genomes_project 11 14111556 14128202 - Eldr processed_transcript processed_transcript MGP_WSBEiJ_T0016563.1 MGP_WSBEiJ_G0014571.1 mouse_genomes_project 11 14111561 14128221 - Eldr processed_transcript processed_transcript MGP_WSBEiJ_T0016564.1 MGP_WSBEiJ_G0014571.1 mouse_genomes_project 11 14111724 14128145 - Eldr processed_transcript processed_transcript MGP_WSBEiJ_T0016565.1 MGP_WSBEiJ_G0014571.1 mouse_genomes_project 11 14111988 14128203 - Eldr processed_transcript processed_transcript MGP_WSBEiJ_T0016566.1 MGP_WSBEiJ_G0014571.1 mouse_genomes_project 11 14112031 14128385 - Eldr processed_transcript processed_transcript MGP_WSBEiJ_T0016567.1 MGP_WSBEiJ_G0014571.1 mouse_genomes_project 11 14112104 14128185 - Eldr processed_transcript processed_transcript MGP_WSBEiJ_T0016568.1 MGP_WSBEiJ_G0014571.1 mouse_genomes_project 11 14115582 14128196 - Eldr processed_transcript processed_transcript MGP_WSBEiJ_T0027229.1 MGP_WSBEiJ_G0017389.1 mouse_genomes_project 11 3239099 3243634 - MGP_WSBEiJ_P0027229 Tmed4 protein_coding protein_coding MGP_WSBEiJ_T0027230.1 MGP_WSBEiJ_G0017389.1 mouse_genomes_project 11 3240396 3243634 - Tmed4 protein_coding retained_intron MGP_WSBEiJ_T0027231.1 MGP_WSBEiJ_G0017389.1 mouse_genomes_project 11 3242504 3243629 - MGP_WSBEiJ_P0027231 Tmed4 protein_coding protein_coding MGP_WSBEiJ_T0012381.1 MGP_WSBEiJ_G0010511.1 mouse_genomes_project 11 66087846 66088825 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029784.1 MGP_WSBEiJ_G0018022.1 mouse_genomes_project 11 73330876 73351464 - MGP_WSBEiJ_P0029784 Aspa protein_coding protein_coding MGP_WSBEiJ_T0029785.1 MGP_WSBEiJ_G0018022.1 mouse_genomes_project 11 73330876 73356408 - MGP_WSBEiJ_P0029785 Aspa protein_coding protein_coding MGP_WSBEiJ_T0029786.1 MGP_WSBEiJ_G0018022.1 mouse_genomes_project 11 73339328 73353305 - MGP_WSBEiJ_P0029786 Aspa protein_coding protein_coding MGP_WSBEiJ_T0029787.1 MGP_WSBEiJ_G0018022.1 mouse_genomes_project 11 73342834 73351167 - Aspa protein_coding retained_intron MGP_WSBEiJ_T0029788.1 MGP_WSBEiJ_G0018022.1 mouse_genomes_project 11 73346666 73353635 - MGP_WSBEiJ_P0029788 Aspa protein_coding protein_coding MGP_WSBEiJ_T0029789.1 MGP_WSBEiJ_G0018022.1 mouse_genomes_project 11 73349051 73351444 - MGP_WSBEiJ_P0029789 Aspa protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027639.1 MGP_WSBEiJ_G0017481.1 mouse_genomes_project 11 27413864 27702006 - MGP_WSBEiJ_P0027639 Eml6 protein_coding protein_coding MGP_WSBEiJ_T0027640.1 MGP_WSBEiJ_G0017481.1 mouse_genomes_project 11 27414950 27435842 - Eml6 protein_coding retained_intron MGP_WSBEiJ_T0027641.1 MGP_WSBEiJ_G0017481.1 mouse_genomes_project 11 27417455 27423232 - Eml6 protein_coding retained_intron MGP_WSBEiJ_T0027642.1 MGP_WSBEiJ_G0017481.1 mouse_genomes_project 11 27418270 27421286 - Eml6 protein_coding retained_intron MGP_WSBEiJ_T0027643.1 MGP_WSBEiJ_G0017481.1 mouse_genomes_project 11 27421723 27431876 - MGP_WSBEiJ_P0027643 Eml6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027644.1 MGP_WSBEiJ_G0017481.1 mouse_genomes_project 11 27473838 27474949 - Eml6 protein_coding retained_intron MGP_WSBEiJ_T0027645.1 MGP_WSBEiJ_G0017481.1 mouse_genomes_project 11 27481239 27493560 - MGP_WSBEiJ_P0027645 Eml6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031955.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104443547 104451675 + MGP_WSBEiJ_P0031955 Grn protein_coding protein_coding MGP_WSBEiJ_T0031956.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104443750 104449312 + MGP_WSBEiJ_P0031956 Grn protein_coding protein_coding MGP_WSBEiJ_T0031957.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104447652 104449123 + Grn protein_coding retained_intron MGP_WSBEiJ_T0031958.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104448797 104449459 + Grn protein_coding retained_intron MGP_WSBEiJ_T0031959.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104448964 104450128 + Grn protein_coding retained_intron MGP_WSBEiJ_T0031960.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104448967 104449757 + Grn protein_coding retained_intron MGP_WSBEiJ_T0031961.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104449583 104450810 + Grn protein_coding retained_intron MGP_WSBEiJ_T0031962.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104450150 104451439 + MGP_WSBEiJ_P0031962 Grn protein_coding protein_coding MGP_WSBEiJ_T0031963.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104450171 104450930 + Grn protein_coding retained_intron MGP_WSBEiJ_T0031964.1 MGP_WSBEiJ_G0018589.1 mouse_genomes_project 11 104450281 104451919 + MGP_WSBEiJ_P0031964 Grn protein_coding protein_coding MGP_WSBEiJ_T0029658.1 MGP_WSBEiJ_G0017987.1 mouse_genomes_project 11 70999471 71142543 - MGP_WSBEiJ_P0029658 protein_coding protein_coding MGP_WSBEiJ_T0003057.1 MGP_WSBEiJ_G0002846.1 mouse_genomes_project 11 16210953 16213008 + Gm16140 antisense antisense MGP_WSBEiJ_T0003058.1 MGP_WSBEiJ_G0002846.1 mouse_genomes_project 11 16210955 16212618 + Gm16140 antisense antisense MGP_WSBEiJ_T0027858.1 MGP_WSBEiJ_G0017539.1 mouse_genomes_project 11 41573213 41577868 + MGP_WSBEiJ_P0027858 Slu7 protein_coding protein_coding MGP_WSBEiJ_T0027859.1 MGP_WSBEiJ_G0017539.1 mouse_genomes_project 11 41573213 41584968 + MGP_WSBEiJ_P0027859 Slu7 protein_coding protein_coding MGP_WSBEiJ_T0027860.1 MGP_WSBEiJ_G0017539.1 mouse_genomes_project 11 41573228 41587564 + MGP_WSBEiJ_P0027860 Slu7 protein_coding protein_coding MGP_WSBEiJ_T0027861.1 MGP_WSBEiJ_G0017539.1 mouse_genomes_project 11 41576935 41587564 + MGP_WSBEiJ_P0027861 Slu7 protein_coding protein_coding MGP_WSBEiJ_T0027862.1 MGP_WSBEiJ_G0017539.1 mouse_genomes_project 11 41576967 41578830 + Slu7 protein_coding processed_transcript MGP_WSBEiJ_T0027863.1 MGP_WSBEiJ_G0017539.1 mouse_genomes_project 11 41580981 41582207 + Slu7 protein_coding processed_transcript MGP_WSBEiJ_T0003122.1 MGP_WSBEiJ_G0002904.1 mouse_genomes_project 11 61969616 61972962 + antisense antisense MGP_WSBEiJ_T0003123.1 MGP_WSBEiJ_G0002904.1 mouse_genomes_project 11 61969617 61972237 + antisense antisense MGP_WSBEiJ_T0028599.1 MGP_WSBEiJ_G0017763.1 mouse_genomes_project 11 58763578 58764697 - MGP_WSBEiJ_P0028599 Olfr222 protein_coding protein_coding MGP_WSBEiJ_T0031486.1 MGP_WSBEiJ_G0018473.1 mouse_genomes_project 11 101444877 101445030 - MGP_WSBEiJ_P0031486 Gm14190 protein_coding protein_coding MGP_WSBEiJ_T0003221.1 MGP_WSBEiJ_G0002979.1 mouse_genomes_project 11 102096329 102110169 - Gm14206 antisense antisense MGP_WSBEiJ_T0029310.1 MGP_WSBEiJ_G0017922.1 mouse_genomes_project 11 69609420 69610520 + MGP_WSBEiJ_P0029310 Tmem256 protein_coding protein_coding MGP_WSBEiJ_T0029311.1 MGP_WSBEiJ_G0017922.1 mouse_genomes_project 11 69609430 69610525 + MGP_WSBEiJ_P0029311 Tmem256 protein_coding protein_coding MGP_WSBEiJ_T0029312.1 MGP_WSBEiJ_G0017922.1 mouse_genomes_project 11 69609461 69610354 + Tmem256 protein_coding processed_transcript MGP_WSBEiJ_T0029313.1 MGP_WSBEiJ_G0017922.1 mouse_genomes_project 11 69609469 69610519 + Tmem256 protein_coding processed_transcript MGP_WSBEiJ_T0029314.1 MGP_WSBEiJ_G0017922.1 mouse_genomes_project 11 69609544 69610480 + Tmem256 protein_coding processed_transcript MGP_WSBEiJ_T0027840.1 MGP_WSBEiJ_G0017534.1 mouse_genomes_project 11 40388438 40404138 - MGP_WSBEiJ_P0027840 Gabra6 protein_coding protein_coding MGP_WSBEiJ_T0027841.1 MGP_WSBEiJ_G0017534.1 mouse_genomes_project 11 40388439 40404140 - MGP_WSBEiJ_P0027841 Gabra6 protein_coding protein_coding MGP_WSBEiJ_T0027842.1 MGP_WSBEiJ_G0017534.1 mouse_genomes_project 11 40389436 40404161 - MGP_WSBEiJ_P0027842 Gabra6 protein_coding protein_coding MGP_WSBEiJ_T0027864.1 MGP_WSBEiJ_G0017540.1 mouse_genomes_project 11 41615243 41633640 + MGP_WSBEiJ_P0027864 C1qtnf2 protein_coding protein_coding MGP_WSBEiJ_T0027865.1 MGP_WSBEiJ_G0017540.1 mouse_genomes_project 11 41615273 41633660 + MGP_WSBEiJ_P0027865 C1qtnf2 protein_coding protein_coding MGP_WSBEiJ_T0027866.1 MGP_WSBEiJ_G0017540.1 mouse_genomes_project 11 41621859 41632999 + MGP_WSBEiJ_P0027866 C1qtnf2 protein_coding protein_coding MGP_WSBEiJ_T0032687.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118463597 118479538 - MGP_WSBEiJ_P0032687 Slc25a19 protein_coding protein_coding MGP_WSBEiJ_T0032688.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118464865 118474014 - MGP_WSBEiJ_P0032688 Slc25a19 protein_coding protein_coding MGP_WSBEiJ_T0032689.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118465974 118467329 - Slc25a19 protein_coding processed_transcript MGP_WSBEiJ_T0032690.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118467085 118479304 - Slc25a19 protein_coding processed_transcript MGP_WSBEiJ_T0032691.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118474195 118479303 - Slc25a19 protein_coding processed_transcript MGP_WSBEiJ_T0032692.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118474600 118479309 - Slc25a19 protein_coding processed_transcript MGP_WSBEiJ_T0032693.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118475065 118479478 - Slc25a19 protein_coding processed_transcript MGP_WSBEiJ_T0032694.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118475387 118479309 - MGP_WSBEiJ_P0032694 Slc25a19 protein_coding protein_coding MGP_WSBEiJ_T0032695.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118475408 118479145 - MGP_WSBEiJ_P0032695 Slc25a19 protein_coding protein_coding MGP_WSBEiJ_T0032696.1 MGP_WSBEiJ_G0018753.1 mouse_genomes_project 11 118475463 118479327 - MGP_WSBEiJ_P0032696 Slc25a19 protein_coding protein_coding MGP_WSBEiJ_T0029708.1 MGP_WSBEiJ_G0018002.1 mouse_genomes_project 11 72423126 72433532 + Mybbp1a protein_coding retained_intron MGP_WSBEiJ_T0029709.1 MGP_WSBEiJ_G0018002.1 mouse_genomes_project 11 72423126 72433532 + MGP_WSBEiJ_P0029709 Mybbp1a protein_coding protein_coding MGP_WSBEiJ_T0029710.1 MGP_WSBEiJ_G0018002.1 mouse_genomes_project 11 72423128 72432993 + Mybbp1a protein_coding retained_intron MGP_WSBEiJ_T0029711.1 MGP_WSBEiJ_G0018002.1 mouse_genomes_project 11 72423148 72425345 + Mybbp1a protein_coding retained_intron MGP_WSBEiJ_T0029712.1 MGP_WSBEiJ_G0018002.1 mouse_genomes_project 11 72425543 72426327 + Mybbp1a protein_coding retained_intron MGP_WSBEiJ_T0029713.1 MGP_WSBEiJ_G0018002.1 mouse_genomes_project 11 72429980 72432769 + Mybbp1a protein_coding retained_intron MGP_WSBEiJ_T0029714.1 MGP_WSBEiJ_G0018002.1 mouse_genomes_project 11 72431401 72432470 + Mybbp1a protein_coding retained_intron MGP_WSBEiJ_T0029715.1 MGP_WSBEiJ_G0018002.1 mouse_genomes_project 11 72432337 72432866 + Mybbp1a protein_coding retained_intron MGP_WSBEiJ_T0032604.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118222746 118231853 + MGP_WSBEiJ_P0032604 Ict1 protein_coding protein_coding MGP_WSBEiJ_T0032605.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118222748 118231841 + MGP_WSBEiJ_P0032605 Ict1 protein_coding protein_coding MGP_WSBEiJ_T0032606.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118222751 118230098 + MGP_WSBEiJ_P0032606 Ict1 protein_coding protein_coding MGP_WSBEiJ_T0032607.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118222761 118229232 + Ict1 protein_coding retained_intron MGP_WSBEiJ_T0032608.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118222765 118229440 + MGP_WSBEiJ_P0032608 Ict1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032609.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118222771 118229938 + Ict1 protein_coding processed_transcript MGP_WSBEiJ_T0032610.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118222776 118229430 + Ict1 protein_coding retained_intron MGP_WSBEiJ_T0032611.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118222816 118229903 + Ict1 protein_coding processed_transcript MGP_WSBEiJ_T0032612.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118229039 118229898 + Ict1 protein_coding retained_intron MGP_WSBEiJ_T0032613.1 MGP_WSBEiJ_G0018740.1 mouse_genomes_project 11 118229338 118230087 + Ict1 protein_coding retained_intron MGP_WSBEiJ_T0029905.1 MGP_WSBEiJ_G0018069.1 mouse_genomes_project 11 75494911 75549128 + MGP_WSBEiJ_P0029905 Smyd4 protein_coding protein_coding MGP_WSBEiJ_T0029906.1 MGP_WSBEiJ_G0018069.1 mouse_genomes_project 11 75494973 75522318 + Smyd4 protein_coding retained_intron MGP_WSBEiJ_T0029907.1 MGP_WSBEiJ_G0018069.1 mouse_genomes_project 11 75527817 75531024 + Smyd4 protein_coding processed_transcript MGP_WSBEiJ_T0029908.1 MGP_WSBEiJ_G0018069.1 mouse_genomes_project 11 75543029 75544054 + Smyd4 protein_coding processed_transcript MGP_WSBEiJ_T0012347.1 MGP_WSBEiJ_G0010477.1 mouse_genomes_project 11 53212304 53212602 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003283.1 MGP_WSBEiJ_G0003031.1 mouse_genomes_project 11 121508238 121519062 - Gm11747 antisense antisense MGP_WSBEiJ_T0028943.1 MGP_WSBEiJ_G0017831.1 mouse_genomes_project 11 63323632 63362600 - MGP_WSBEiJ_P0028943 Hs3st3b1 protein_coding protein_coding MGP_WSBEiJ_T0098947.1 MGP_WSBEiJ_G0037610.1 mouse_genomes_project 11 94019783 94019926 + Gm25113 snoRNA snoRNA MGP_WSBEiJ_T0030575.1 MGP_WSBEiJ_G0018232.1 mouse_genomes_project 11 85555579 85563688 - MGP_WSBEiJ_P0030575 Dhrs11 protein_coding protein_coding MGP_WSBEiJ_T0030576.1 MGP_WSBEiJ_G0018232.1 mouse_genomes_project 11 85556717 85563718 - MGP_WSBEiJ_P0030576 Dhrs11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031745.1 MGP_WSBEiJ_G0018551.1 mouse_genomes_project 11 103265467 103276142 + MGP_WSBEiJ_P0031745 G6pc protein_coding protein_coding MGP_WSBEiJ_T0032319.1 MGP_WSBEiJ_G0018670.1 mouse_genomes_project 11 109091143 109193860 - MGP_WSBEiJ_P0032319 Smurf2 protein_coding protein_coding MGP_WSBEiJ_T0032320.1 MGP_WSBEiJ_G0018670.1 mouse_genomes_project 11 109093102 109193420 - Smurf2 protein_coding processed_transcript MGP_WSBEiJ_T0032321.1 MGP_WSBEiJ_G0018670.1 mouse_genomes_project 11 109093102 109193615 - MGP_WSBEiJ_P0032321 Smurf2 protein_coding protein_coding MGP_WSBEiJ_T0032322.1 MGP_WSBEiJ_G0018670.1 mouse_genomes_project 11 109093690 109193504 - MGP_WSBEiJ_P0032322 Smurf2 protein_coding protein_coding MGP_WSBEiJ_T0032323.1 MGP_WSBEiJ_G0018670.1 mouse_genomes_project 11 109095625 109099914 - Smurf2 protein_coding processed_transcript MGP_WSBEiJ_T0032324.1 MGP_WSBEiJ_G0018670.1 mouse_genomes_project 11 109101493 109110206 - Smurf2 protein_coding processed_transcript MGP_WSBEiJ_T0028571.1 MGP_WSBEiJ_G0017753.1 mouse_genomes_project 11 58377032 58379477 + MGP_WSBEiJ_P0028571 2310033P09Rik protein_coding protein_coding MGP_WSBEiJ_T0033415.1 MGP_WSBEiJ_G0018889.1 mouse_genomes_project 11 124164663 124195608 - MGP_WSBEiJ_P0033415 Csnk1d protein_coding protein_coding MGP_WSBEiJ_T0033416.1 MGP_WSBEiJ_G0018889.1 mouse_genomes_project 11 124164663 124195370 - MGP_WSBEiJ_P0033416 Csnk1d protein_coding protein_coding MGP_WSBEiJ_T0033417.1 MGP_WSBEiJ_G0018889.1 mouse_genomes_project 11 124166565 124168604 - Csnk1d protein_coding processed_transcript MGP_WSBEiJ_T0033418.1 MGP_WSBEiJ_G0018889.1 mouse_genomes_project 11 124166690 124174722 - Csnk1d protein_coding processed_transcript MGP_WSBEiJ_T0033419.1 MGP_WSBEiJ_G0018889.1 mouse_genomes_project 11 124170707 124171157 - Csnk1d protein_coding processed_transcript MGP_WSBEiJ_T0033420.1 MGP_WSBEiJ_G0018889.1 mouse_genomes_project 11 124175569 124195149 - MGP_WSBEiJ_P0033420 Csnk1d protein_coding protein_coding MGP_WSBEiJ_T0033421.1 MGP_WSBEiJ_G0018889.1 mouse_genomes_project 11 124175587 124195265 - MGP_WSBEiJ_P0033421 Csnk1d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033422.1 MGP_WSBEiJ_G0018889.1 mouse_genomes_project 11 124185889 124195329 - Csnk1d protein_coding retained_intron MGP_WSBEiJ_T0009527.1 MGP_WSBEiJ_G0007684.1 mouse_genomes_project 11 48763521 48763583 + Mir6919 miRNA miRNA MGP_WSBEiJ_T0000821.1 MGP_WSBEiJ_G0000760.1 mouse_genomes_project 11 108140344 108141882 + TEC TEC MGP_WSBEiJ_T0029230.1 MGP_WSBEiJ_G0017901.1 mouse_genomes_project 11 69353405 69359499 - MGP_WSBEiJ_P0029230 Atp1b2 protein_coding protein_coding MGP_WSBEiJ_T0029231.1 MGP_WSBEiJ_G0017901.1 mouse_genomes_project 11 69353410 69359612 - Atp1b2 protein_coding processed_transcript MGP_WSBEiJ_T0029232.1 MGP_WSBEiJ_G0017901.1 mouse_genomes_project 11 69354335 69356411 - MGP_WSBEiJ_P0029232 Atp1b2 protein_coding protein_coding MGP_WSBEiJ_T0029233.1 MGP_WSBEiJ_G0017901.1 mouse_genomes_project 11 69355027 69357283 - Atp1b2 protein_coding processed_transcript MGP_WSBEiJ_T0029234.1 MGP_WSBEiJ_G0017901.1 mouse_genomes_project 11 69355813 69356832 - Atp1b2 protein_coding processed_transcript MGP_WSBEiJ_T0027939.1 MGP_WSBEiJ_G0017563.1 mouse_genomes_project 11 44746092 44775744 + MGP_WSBEiJ_P0027939 protein_coding protein_coding MGP_WSBEiJ_T0027940.1 MGP_WSBEiJ_G0017563.1 mouse_genomes_project 11 44746126 44775735 + MGP_WSBEiJ_P0027940 protein_coding protein_coding MGP_WSBEiJ_T0029365.1 MGP_WSBEiJ_G0017933.1 mouse_genomes_project 11 69723846 69729490 - Slc2a4 protein_coding retained_intron MGP_WSBEiJ_T0029366.1 MGP_WSBEiJ_G0017933.1 mouse_genomes_project 11 69723867 69729296 - MGP_WSBEiJ_P0029366 Slc2a4 protein_coding protein_coding MGP_WSBEiJ_T0029367.1 MGP_WSBEiJ_G0017933.1 mouse_genomes_project 11 69725099 69729479 - MGP_WSBEiJ_P0029367 Slc2a4 protein_coding protein_coding MGP_WSBEiJ_T0029368.1 MGP_WSBEiJ_G0017933.1 mouse_genomes_project 11 69726575 69729289 - MGP_WSBEiJ_P0029368 Slc2a4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029369.1 MGP_WSBEiJ_G0017933.1 mouse_genomes_project 11 69726575 69729462 - MGP_WSBEiJ_P0029369 Slc2a4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029370.1 MGP_WSBEiJ_G0017933.1 mouse_genomes_project 11 69726869 69729460 - MGP_WSBEiJ_P0029370 Slc2a4 protein_coding protein_coding MGP_WSBEiJ_T0029371.1 MGP_WSBEiJ_G0017933.1 mouse_genomes_project 11 69727375 69729469 - MGP_WSBEiJ_P0029371 Slc2a4 protein_coding protein_coding MGP_WSBEiJ_T0012351.1 MGP_WSBEiJ_G0010481.1 mouse_genomes_project 11 54442141 54442611 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012513.1 MGP_WSBEiJ_G0010643.1 mouse_genomes_project 11 124295447 124295615 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003244.1 MGP_WSBEiJ_G0003001.1 mouse_genomes_project 11 109085747 109087086 - Gm11706 antisense antisense MGP_WSBEiJ_T0032029.1 MGP_WSBEiJ_G0018603.1 mouse_genomes_project 11 104938938 104948637 - MGP_WSBEiJ_P0032029 Gfap protein_coding protein_coding MGP_WSBEiJ_T0032030.1 MGP_WSBEiJ_G0018603.1 mouse_genomes_project 11 104941753 104948706 - MGP_WSBEiJ_P0032030 Gfap protein_coding protein_coding MGP_WSBEiJ_T0032031.1 MGP_WSBEiJ_G0018603.1 mouse_genomes_project 11 104945996 104952418 - Gfap protein_coding processed_transcript MGP_WSBEiJ_T0031348.1 MGP_WSBEiJ_G0018419.1 mouse_genomes_project 11 100027498 100028782 - MGP_WSBEiJ_P0031348 Mien1 protein_coding protein_coding MGP_WSBEiJ_T0098942.1 MGP_WSBEiJ_G0037605.1 mouse_genomes_project 11 78922953 78923044 - Gm22947 snoRNA snoRNA MGP_WSBEiJ_T0033372.1 MGP_WSBEiJ_G0018880.1 mouse_genomes_project 11 123920673 123922550 - MGP_WSBEiJ_P0033372 Dcxr protein_coding protein_coding MGP_WSBEiJ_T0033373.1 MGP_WSBEiJ_G0018880.1 mouse_genomes_project 11 123920673 123922512 - MGP_WSBEiJ_P0033373 Dcxr protein_coding protein_coding MGP_WSBEiJ_T0033374.1 MGP_WSBEiJ_G0018880.1 mouse_genomes_project 11 123920699 123922513 - Dcxr protein_coding retained_intron MGP_WSBEiJ_T0033375.1 MGP_WSBEiJ_G0018880.1 mouse_genomes_project 11 123920729 123922498 - Dcxr protein_coding processed_transcript MGP_WSBEiJ_T0028209.1 MGP_WSBEiJ_G0017640.1 mouse_genomes_project 11 50442841 50488191 - MGP_WSBEiJ_P0028209 Jade2 protein_coding protein_coding MGP_WSBEiJ_T0028210.1 MGP_WSBEiJ_G0017640.1 mouse_genomes_project 11 50473613 50488927 - Jade2 protein_coding processed_transcript MGP_WSBEiJ_T0000809.1 MGP_WSBEiJ_G0000748.1 mouse_genomes_project 11 13181190 13181826 + TEC TEC MGP_WSBEiJ_T0016632.1 MGP_WSBEiJ_G0014608.1 mouse_genomes_project 11 85563901 85565576 + 4930502E09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0029204.1 MGP_WSBEiJ_G0017894.1 mouse_genomes_project 11 69135546 69136384 + Naa38 protein_coding processed_transcript MGP_WSBEiJ_T0029205.1 MGP_WSBEiJ_G0017894.1 mouse_genomes_project 11 69135706 69136740 + MGP_WSBEiJ_P0029205 Naa38 protein_coding protein_coding MGP_WSBEiJ_T0029206.1 MGP_WSBEiJ_G0017894.1 mouse_genomes_project 11 69135873 69136740 + Naa38 protein_coding processed_transcript MGP_WSBEiJ_T0029207.1 MGP_WSBEiJ_G0017894.1 mouse_genomes_project 11 69136177 69136740 + Naa38 protein_coding processed_transcript MGP_WSBEiJ_T0030263.1 MGP_WSBEiJ_G0018142.1 mouse_genomes_project 11 78850599 78852094 + Vtn protein_coding retained_intron MGP_WSBEiJ_T0030264.1 MGP_WSBEiJ_G0018142.1 mouse_genomes_project 11 78850628 78853791 + MGP_WSBEiJ_P0030264 Vtn protein_coding protein_coding MGP_WSBEiJ_T0030265.1 MGP_WSBEiJ_G0018142.1 mouse_genomes_project 11 78850680 78851753 + Vtn protein_coding retained_intron MGP_WSBEiJ_T0030266.1 MGP_WSBEiJ_G0018142.1 mouse_genomes_project 11 78852114 78853689 + Vtn protein_coding retained_intron MGP_WSBEiJ_T0006161.1 MGP_WSBEiJ_G0005148.1 mouse_genomes_project 11 62128156 62132970 + Gm27194 lincRNA lincRNA MGP_WSBEiJ_T0012394.1 MGP_WSBEiJ_G0010524.1 mouse_genomes_project 11 70604631 70604904 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033486.1 MGP_WSBEiJ_G0018908.1 mouse_genomes_project 11 124923093 124941484 + MGP_WSBEiJ_P0033486 Metrnl protein_coding protein_coding MGP_WSBEiJ_T0033487.1 MGP_WSBEiJ_G0018908.1 mouse_genomes_project 11 124923230 124936367 + MGP_WSBEiJ_P0033487 Metrnl protein_coding protein_coding MGP_WSBEiJ_T0032614.1 MGP_WSBEiJ_G0018741.1 mouse_genomes_project 11 118234857 118237191 - Atp5h protein_coding processed_transcript MGP_WSBEiJ_T0032615.1 MGP_WSBEiJ_G0018741.1 mouse_genomes_project 11 118234857 118236187 - Atp5h protein_coding processed_transcript MGP_WSBEiJ_T0032616.1 MGP_WSBEiJ_G0018741.1 mouse_genomes_project 11 118234857 118239125 - MGP_WSBEiJ_P0032616 Atp5h protein_coding protein_coding MGP_WSBEiJ_T0032617.1 MGP_WSBEiJ_G0018741.1 mouse_genomes_project 11 118234857 118239080 - MGP_WSBEiJ_P0032617 Atp5h protein_coding protein_coding MGP_WSBEiJ_T0032618.1 MGP_WSBEiJ_G0018741.1 mouse_genomes_project 11 118234857 118239125 - MGP_WSBEiJ_P0032618 Atp5h protein_coding protein_coding MGP_WSBEiJ_T0032619.1 MGP_WSBEiJ_G0018741.1 mouse_genomes_project 11 118234916 118237676 - MGP_WSBEiJ_P0032619 Atp5h protein_coding protein_coding MGP_WSBEiJ_T0032620.1 MGP_WSBEiJ_G0018741.1 mouse_genomes_project 11 118234986 118237910 - MGP_WSBEiJ_P0032620 Atp5h protein_coding protein_coding MGP_WSBEiJ_T0032621.1 MGP_WSBEiJ_G0018741.1 mouse_genomes_project 11 118236021 118238242 - Atp5h protein_coding processed_transcript MGP_WSBEiJ_T0030826.1 MGP_WSBEiJ_G0018289.1 mouse_genomes_project 11 90032276 90067742 - MGP_WSBEiJ_P0030826 Dgke protein_coding protein_coding MGP_WSBEiJ_T0030827.1 MGP_WSBEiJ_G0018289.1 mouse_genomes_project 11 90034676 90061678 - MGP_WSBEiJ_P0030827 Dgke protein_coding protein_coding MGP_WSBEiJ_T0030828.1 MGP_WSBEiJ_G0018289.1 mouse_genomes_project 11 90036300 90061678 - MGP_WSBEiJ_P0030828 Dgke protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012249.1 MGP_WSBEiJ_G0010379.1 mouse_genomes_project 11 16943894 16945568 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028119.1 MGP_WSBEiJ_G0017616.1 mouse_genomes_project 11 48926991 48969435 - MGP_WSBEiJ_P0028119 Rufy1 protein_coding protein_coding MGP_WSBEiJ_T0028120.1 MGP_WSBEiJ_G0017616.1 mouse_genomes_project 11 48927078 48953099 - Rufy1 protein_coding processed_transcript MGP_WSBEiJ_T0028121.1 MGP_WSBEiJ_G0017616.1 mouse_genomes_project 11 48946428 48960343 - Rufy1 protein_coding processed_transcript MGP_WSBEiJ_T0031621.1 MGP_WSBEiJ_G0018526.1 mouse_genomes_project 11 102707270 102739652 + MGP_WSBEiJ_P0031621 Stat5a protein_coding protein_coding MGP_WSBEiJ_T0031622.1 MGP_WSBEiJ_G0018526.1 mouse_genomes_project 11 102707329 102710200 + MGP_WSBEiJ_P0031622 Stat5a protein_coding protein_coding MGP_WSBEiJ_T0031623.1 MGP_WSBEiJ_G0018526.1 mouse_genomes_project 11 102707575 102739652 + MGP_WSBEiJ_P0031623 Stat5a protein_coding protein_coding MGP_WSBEiJ_T0031624.1 MGP_WSBEiJ_G0018526.1 mouse_genomes_project 11 102708797 102711673 + MGP_WSBEiJ_P0031624 Stat5a protein_coding protein_coding MGP_WSBEiJ_T0031625.1 MGP_WSBEiJ_G0018526.1 mouse_genomes_project 11 102708936 102739651 + MGP_WSBEiJ_P0031625 Stat5a protein_coding protein_coding MGP_WSBEiJ_T0031626.1 MGP_WSBEiJ_G0018526.1 mouse_genomes_project 11 102708937 102730566 + Stat5a protein_coding processed_transcript MGP_WSBEiJ_T0009519.1 MGP_WSBEiJ_G0007676.1 mouse_genomes_project 11 36032353 36032432 - Gm25693 miRNA miRNA MGP_WSBEiJ_T0006267.1 MGP_WSBEiJ_G0005224.1 mouse_genomes_project 11 116938759 116957988 - Gm11690 lincRNA lincRNA MGP_WSBEiJ_T0012464.1 MGP_WSBEiJ_G0010594.1 mouse_genomes_project 11 102041472 102041808 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009555.1 MGP_WSBEiJ_G0007712.1 mouse_genomes_project 11 70032610 70032704 + Mir195a miRNA miRNA MGP_WSBEiJ_T0030412.1 MGP_WSBEiJ_G0018181.1 mouse_genomes_project 11 82607010 82617366 - MGP_WSBEiJ_P0030412 Gm17268 protein_coding protein_coding MGP_WSBEiJ_T0031114.1 MGP_WSBEiJ_G0018366.1 mouse_genomes_project 11 97758543 97761691 + Hoxb2 protein_coding retained_intron MGP_WSBEiJ_T0031115.1 MGP_WSBEiJ_G0018366.1 mouse_genomes_project 11 97759653 97762046 + MGP_WSBEiJ_P0031115 Hoxb2 protein_coding protein_coding MGP_WSBEiJ_T0027529.1 MGP_WSBEiJ_G0017458.1 mouse_genomes_project 11 20928293 20933039 - MGP_WSBEiJ_P0027529 1700093K21Rik protein_coding protein_coding MGP_WSBEiJ_T0027530.1 MGP_WSBEiJ_G0017458.1 mouse_genomes_project 11 20928293 20932320 - MGP_WSBEiJ_P0027530 1700093K21Rik protein_coding protein_coding MGP_WSBEiJ_T0027531.1 MGP_WSBEiJ_G0017458.1 mouse_genomes_project 11 20931884 20933039 - MGP_WSBEiJ_P0027531 1700093K21Rik protein_coding protein_coding MGP_WSBEiJ_T0027532.1 MGP_WSBEiJ_G0017458.1 mouse_genomes_project 11 20931913 20934255 - MGP_WSBEiJ_P0027532 1700093K21Rik protein_coding protein_coding MGP_WSBEiJ_T0098953.1 MGP_WSBEiJ_G0037616.1 mouse_genomes_project 11 100721302 100721424 - Gm23451 snoRNA snoRNA MGP_WSBEiJ_T0097706.1 MGP_WSBEiJ_G0036369.1 mouse_genomes_project 11 71984866 71984969 + Gm23226 snRNA snRNA MGP_WSBEiJ_T0030048.1 MGP_WSBEiJ_G0018100.1 mouse_genomes_project 11 77135229 77154793 + MGP_WSBEiJ_P0030048 Tmigd1 protein_coding protein_coding MGP_WSBEiJ_T0030049.1 MGP_WSBEiJ_G0018100.1 mouse_genomes_project 11 77137548 77147053 + MGP_WSBEiJ_P0030049 Tmigd1 protein_coding protein_coding MGP_WSBEiJ_T0030050.1 MGP_WSBEiJ_G0018100.1 mouse_genomes_project 11 77137618 77154792 + MGP_WSBEiJ_P0030050 Tmigd1 protein_coding protein_coding MGP_WSBEiJ_T0030051.1 MGP_WSBEiJ_G0018100.1 mouse_genomes_project 11 77137635 77154303 + Tmigd1 protein_coding processed_transcript MGP_WSBEiJ_T0009587.1 MGP_WSBEiJ_G0007744.1 mouse_genomes_project 11 98300160 98300233 + Mir152 miRNA miRNA MGP_WSBEiJ_T0030405.1 MGP_WSBEiJ_G0018177.1 mouse_genomes_project 11 81313363 81328718 + MGP_WSBEiJ_P0030405 Tmem98 protein_coding protein_coding MGP_WSBEiJ_T0003083.1 MGP_WSBEiJ_G0002870.1 mouse_genomes_project 11 49396076 49397327 - Gm12660 antisense antisense MGP_WSBEiJ_T0006162.1 MGP_WSBEiJ_G0005149.1 mouse_genomes_project 11 62575244 62591814 + B430319H21Rik lincRNA lincRNA MGP_WSBEiJ_T0016605.1 MGP_WSBEiJ_G0014593.1 mouse_genomes_project 11 61966728 61968658 + 2410006H16Rik processed_transcript processed_transcript MGP_WSBEiJ_T0009613.1 MGP_WSBEiJ_G0007770.1 mouse_genomes_project 11 110342831 110342900 + Mir7223 miRNA miRNA MGP_WSBEiJ_T0003127.1 MGP_WSBEiJ_G0002908.1 mouse_genomes_project 11 62310343 62313976 - Tvp23bos antisense antisense MGP_WSBEiJ_T0012316.1 MGP_WSBEiJ_G0010446.1 mouse_genomes_project 11 39655473 39656385 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033048.1 MGP_WSBEiJ_G0018819.1 mouse_genomes_project 11 121361810 121412046 - MGP_WSBEiJ_P0033048 Timp2 protein_coding protein_coding MGP_WSBEiJ_T0031168.1 MGP_WSBEiJ_G0018375.1 mouse_genomes_project 11 98396812 98405483 - Pnpo protein_coding processed_transcript MGP_WSBEiJ_T0031169.1 MGP_WSBEiJ_G0018375.1 mouse_genomes_project 11 98396814 98405572 - MGP_WSBEiJ_P0031169 Pnpo protein_coding protein_coding MGP_WSBEiJ_T0032829.1 MGP_WSBEiJ_G0018775.1 mouse_genomes_project 11 119094535 119111859 + MGP_WSBEiJ_P0032829 Ten1 protein_coding protein_coding MGP_WSBEiJ_T0032830.1 MGP_WSBEiJ_G0018775.1 mouse_genomes_project 11 119094578 119103605 + Ten1 protein_coding retained_intron MGP_WSBEiJ_T0032831.1 MGP_WSBEiJ_G0018775.1 mouse_genomes_project 11 119094639 119111789 + Ten1 protein_coding processed_transcript MGP_WSBEiJ_T0032832.1 MGP_WSBEiJ_G0018775.1 mouse_genomes_project 11 119107473 119111789 + Ten1 protein_coding processed_transcript MGP_WSBEiJ_T0012424.1 MGP_WSBEiJ_G0010554.1 mouse_genomes_project 11 83341574 83342677 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027219.1 MGP_WSBEiJ_G0017385.1 mouse_genomes_project 11 3079432 3168185 - MGP_WSBEiJ_P0027219 Nudcd3 protein_coding protein_coding MGP_WSBEiJ_T0027220.1 MGP_WSBEiJ_G0017385.1 mouse_genomes_project 11 3079727 3093207 - Nudcd3 protein_coding processed_transcript MGP_WSBEiJ_T0027221.1 MGP_WSBEiJ_G0017385.1 mouse_genomes_project 11 3080199 3161258 - MGP_WSBEiJ_P0027221 Nudcd3 protein_coding protein_coding MGP_WSBEiJ_T0027222.1 MGP_WSBEiJ_G0017385.1 mouse_genomes_project 11 3096742 3161258 - Nudcd3 protein_coding retained_intron MGP_WSBEiJ_T0029694.1 MGP_WSBEiJ_G0017997.1 mouse_genomes_project 11 72270022 72277454 + MGP_WSBEiJ_P0029694 Xaf1 protein_coding protein_coding MGP_WSBEiJ_T0029695.1 MGP_WSBEiJ_G0017997.1 mouse_genomes_project 11 72270023 72283080 + MGP_WSBEiJ_P0029695 Xaf1 protein_coding protein_coding MGP_WSBEiJ_T0029696.1 MGP_WSBEiJ_G0017997.1 mouse_genomes_project 11 72270032 72280474 + MGP_WSBEiJ_P0029696 Xaf1 protein_coding protein_coding MGP_WSBEiJ_T0029697.1 MGP_WSBEiJ_G0017997.1 mouse_genomes_project 11 72270056 72277142 + MGP_WSBEiJ_P0029697 Xaf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029698.1 MGP_WSBEiJ_G0017997.1 mouse_genomes_project 11 72270058 72277161 + Xaf1 protein_coding retained_intron MGP_WSBEiJ_T0027084.1 MGP_WSBEiJ_G0017358.1 mouse_genomes_project 11 1643371 1655391 - MGP_WSBEiJ_P0027084 Cabp7 protein_coding protein_coding MGP_WSBEiJ_T0030374.1 MGP_WSBEiJ_G0018172.1 mouse_genomes_project 11 80830614 80849324 - MGP_WSBEiJ_P0030374 5730455P16Rik protein_coding protein_coding MGP_WSBEiJ_T0030375.1 MGP_WSBEiJ_G0018172.1 mouse_genomes_project 11 80830620 80849331 - MGP_WSBEiJ_P0030375 5730455P16Rik protein_coding protein_coding MGP_WSBEiJ_T0030376.1 MGP_WSBEiJ_G0018172.1 mouse_genomes_project 11 80834130 80839677 - 5730455P16Rik protein_coding retained_intron MGP_WSBEiJ_T0030377.1 MGP_WSBEiJ_G0018172.1 mouse_genomes_project 11 80841717 80849331 - MGP_WSBEiJ_P0030377 5730455P16Rik protein_coding protein_coding MGP_WSBEiJ_T0027361.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9352378 9589315 - MGP_WSBEiJ_P0027361 Cobl protein_coding protein_coding MGP_WSBEiJ_T0027362.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9352446 9589468 - MGP_WSBEiJ_P0027362 Cobl protein_coding protein_coding MGP_WSBEiJ_T0027363.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9352446 9589370 - MGP_WSBEiJ_P0027363 Cobl protein_coding protein_coding MGP_WSBEiJ_T0027364.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9352448 9534473 - MGP_WSBEiJ_P0027364 Cobl protein_coding protein_coding MGP_WSBEiJ_T0027365.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9352448 9589471 - MGP_WSBEiJ_P0027365 Cobl protein_coding protein_coding MGP_WSBEiJ_T0027366.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9352881 9589311 - MGP_WSBEiJ_P0027366 Cobl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027367.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9382713 9489881 - MGP_WSBEiJ_P0027367 Cobl protein_coding protein_coding MGP_WSBEiJ_T0027368.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9413722 9489829 - MGP_WSBEiJ_P0027368 Cobl protein_coding protein_coding MGP_WSBEiJ_T0027369.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9423017 9589263 - Cobl protein_coding retained_intron MGP_WSBEiJ_T0027370.1 MGP_WSBEiJ_G0017419.1 mouse_genomes_project 11 9464544 9499444 - MGP_WSBEiJ_P0027370 Cobl protein_coding protein_coding MGP_WSBEiJ_T0003043.1 MGP_WSBEiJ_G0002836.1 mouse_genomes_project 11 2437915 2445155 + Gm11963 antisense antisense MGP_WSBEiJ_T0030909.1 MGP_WSBEiJ_G0018309.1 mouse_genomes_project 11 95408383 95412382 + MGP_WSBEiJ_P0030909 Tob1 protein_coding protein_coding MGP_WSBEiJ_T0031575.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102412376 102414345 - Dnajc7 protein_coding processed_transcript MGP_WSBEiJ_T0031576.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102412376 102451893 - MGP_WSBEiJ_P0031576 Dnajc7 protein_coding protein_coding MGP_WSBEiJ_T0031577.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102412822 102415051 - Dnajc7 protein_coding processed_transcript MGP_WSBEiJ_T0031578.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102413898 102420521 - Dnajc7 protein_coding processed_transcript MGP_WSBEiJ_T0031579.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102420379 102451302 - MGP_WSBEiJ_P0031579 Dnajc7 protein_coding protein_coding MGP_WSBEiJ_T0031580.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102420386 102451323 - Dnajc7 protein_coding processed_transcript MGP_WSBEiJ_T0031581.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102420511 102426199 - Dnajc7 protein_coding processed_transcript MGP_WSBEiJ_T0031582.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102422456 102443680 - MGP_WSBEiJ_P0031582 Dnajc7 protein_coding protein_coding MGP_WSBEiJ_T0031583.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102426917 102451305 - Dnajc7 protein_coding processed_transcript MGP_WSBEiJ_T0031584.1 MGP_WSBEiJ_G0018515.1 mouse_genomes_project 11 102427826 102451385 - Dnajc7 protein_coding processed_transcript MGP_WSBEiJ_T0100467.1 MGP_WSBEiJ_G0038926.1 mouse_genomes_project 11 49513922 49514923 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097273.1 MGP_WSBEiJ_G0035952.1 mouse_genomes_project 11 110736099 110737161 + Gm11656 sense_intronic sense_intronic MGP_WSBEiJ_T0097274.1 MGP_WSBEiJ_G0035952.1 mouse_genomes_project 11 110736115 110739330 + Gm11656 sense_intronic sense_intronic MGP_WSBEiJ_T0028714.1 MGP_WSBEiJ_G0017787.1 mouse_genomes_project 11 60028178 60031723 + MGP_WSBEiJ_P0028714 Smcr8 protein_coding protein_coding MGP_WSBEiJ_T0028715.1 MGP_WSBEiJ_G0017787.1 mouse_genomes_project 11 60028179 60039265 + MGP_WSBEiJ_P0028715 Smcr8 protein_coding protein_coding MGP_WSBEiJ_T0009569.1 MGP_WSBEiJ_G0007726.1 mouse_genomes_project 11 78386225 78386291 + Mir144 miRNA miRNA MGP_WSBEiJ_T0097743.1 MGP_WSBEiJ_G0036406.1 mouse_genomes_project 11 111439360 111439467 - Gm24149 snRNA snRNA MGP_WSBEiJ_T0027166.1 MGP_WSBEiJ_G0017372.1 mouse_genomes_project 11 2475006 2491274 - MGP_WSBEiJ_P0027166 Ccdc117 protein_coding protein_coding MGP_WSBEiJ_T0028190.1 MGP_WSBEiJ_G0017634.1 mouse_genomes_project 11 50247071 50259382 - MGP_WSBEiJ_P0028190 Rmnd5b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028191.1 MGP_WSBEiJ_G0017634.1 mouse_genomes_project 11 50247073 50259631 - MGP_WSBEiJ_P0028191 Rmnd5b protein_coding protein_coding MGP_WSBEiJ_T0028192.1 MGP_WSBEiJ_G0017634.1 mouse_genomes_project 11 50247442 50249240 - MGP_WSBEiJ_P0028192 Rmnd5b protein_coding protein_coding MGP_WSBEiJ_T0028193.1 MGP_WSBEiJ_G0017634.1 mouse_genomes_project 11 50253034 50259488 - Rmnd5b protein_coding processed_transcript MGP_WSBEiJ_T0006213.1 MGP_WSBEiJ_G0005186.1 mouse_genomes_project 11 88993777 89004096 + Gm15892 lincRNA lincRNA MGP_WSBEiJ_T0006214.1 MGP_WSBEiJ_G0005186.1 mouse_genomes_project 11 89002977 89003644 + Gm15892 lincRNA lincRNA MGP_WSBEiJ_T0006215.1 MGP_WSBEiJ_G0005186.1 mouse_genomes_project 11 89003037 89004072 + Gm15892 lincRNA lincRNA MGP_WSBEiJ_T0012489.1 MGP_WSBEiJ_G0010619.1 mouse_genomes_project 11 111075347 111075771 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003165.1 MGP_WSBEiJ_G0002939.1 mouse_genomes_project 11 81357185 81365062 - 4930507D10Rik antisense antisense MGP_WSBEiJ_T0012265.1 MGP_WSBEiJ_G0010395.1 mouse_genomes_project 11 19277337 19277823 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003198.1 MGP_WSBEiJ_G0002963.1 mouse_genomes_project 11 97384768 97386934 + Gm29202 antisense antisense MGP_WSBEiJ_T0031217.1 MGP_WSBEiJ_G0018386.1 mouse_genomes_project 11 98798726 98813700 + MGP_WSBEiJ_P0031217 Mrpl45 protein_coding protein_coding MGP_WSBEiJ_T0031218.1 MGP_WSBEiJ_G0018386.1 mouse_genomes_project 11 98798912 98804519 + MGP_WSBEiJ_P0031218 Mrpl45 protein_coding protein_coding MGP_WSBEiJ_T0029385.1 MGP_WSBEiJ_G0017936.1 mouse_genomes_project 11 69765025 69773357 + MGP_WSBEiJ_P0029385 Ctdnep1 protein_coding protein_coding MGP_WSBEiJ_T0029386.1 MGP_WSBEiJ_G0017936.1 mouse_genomes_project 11 69767795 69772870 + Ctdnep1 protein_coding retained_intron MGP_WSBEiJ_T0029387.1 MGP_WSBEiJ_G0017936.1 mouse_genomes_project 11 69772392 69773477 + Ctdnep1 protein_coding retained_intron MGP_WSBEiJ_T0029388.1 MGP_WSBEiJ_G0017936.1 mouse_genomes_project 11 69772412 69773722 + Ctdnep1 protein_coding processed_transcript MGP_WSBEiJ_T0009516.1 MGP_WSBEiJ_G0007673.1 mouse_genomes_project 11 30778820 30778920 - Gm26052 miRNA miRNA MGP_WSBEiJ_T0028139.1 MGP_WSBEiJ_G0017622.1 mouse_genomes_project 11 49448762 49460872 - MGP_WSBEiJ_P0028139 Zfp2 protein_coding protein_coding MGP_WSBEiJ_T0028140.1 MGP_WSBEiJ_G0017622.1 mouse_genomes_project 11 49448762 49466194 - MGP_WSBEiJ_P0028140 Zfp2 protein_coding protein_coding MGP_WSBEiJ_T0028141.1 MGP_WSBEiJ_G0017622.1 mouse_genomes_project 11 49449109 49466217 - MGP_WSBEiJ_P0028141 Zfp2 protein_coding protein_coding MGP_WSBEiJ_T0028142.1 MGP_WSBEiJ_G0017622.1 mouse_genomes_project 11 49451297 49466183 - Zfp2 protein_coding processed_transcript MGP_WSBEiJ_T0028143.1 MGP_WSBEiJ_G0017622.1 mouse_genomes_project 11 49455225 49466204 - Zfp2 protein_coding processed_transcript MGP_WSBEiJ_T0028144.1 MGP_WSBEiJ_G0017622.1 mouse_genomes_project 11 49456031 49466186 - Zfp2 protein_coding processed_transcript MGP_WSBEiJ_T0006093.1 MGP_WSBEiJ_G0005088.1 mouse_genomes_project 11 19777184 19778079 - Gm12050 lincRNA lincRNA MGP_WSBEiJ_T0011111.1 MGP_WSBEiJ_G0009268.1 mouse_genomes_project 11 84533914 84534222 + Gm23211 misc_RNA misc_RNA MGP_WSBEiJ_T0027869.1 MGP_WSBEiJ_G0017542.1 mouse_genomes_project 11 41738508 41740494 + MGP_WSBEiJ_P0027869 4933415A04Rik protein_coding protein_coding MGP_WSBEiJ_T0029805.1 MGP_WSBEiJ_G0018033.1 mouse_genomes_project 11 73862452 73866654 - MGP_WSBEiJ_P0029805 Olfr389 protein_coding protein_coding MGP_WSBEiJ_T0029806.1 MGP_WSBEiJ_G0018033.1 mouse_genomes_project 11 73862718 73866600 - MGP_WSBEiJ_P0029806 Olfr389 protein_coding protein_coding MGP_WSBEiJ_T0098922.1 MGP_WSBEiJ_G0037585.1 mouse_genomes_project 11 57727775 57727907 + Gm22599 snoRNA snoRNA MGP_WSBEiJ_T0009552.1 MGP_WSBEiJ_G0007709.1 mouse_genomes_project 11 69797260 69797349 + Mir324 miRNA miRNA MGP_WSBEiJ_T0029004.1 MGP_WSBEiJ_G0017849.1 mouse_genomes_project 11 66753231 66779033 + MGP_WSBEiJ_P0029004 Myh1 protein_coding protein_coding MGP_WSBEiJ_T0029005.1 MGP_WSBEiJ_G0017849.1 mouse_genomes_project 11 66753265 66755383 + MGP_WSBEiJ_P0029005 Myh1 protein_coding protein_coding MGP_WSBEiJ_T0031199.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98681065 98761019 - MGP_WSBEiJ_P0031199 Npepps protein_coding protein_coding MGP_WSBEiJ_T0031200.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98681065 98760971 - MGP_WSBEiJ_P0031200 Npepps protein_coding protein_coding MGP_WSBEiJ_T0031201.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98681067 98761030 - MGP_WSBEiJ_P0031201 Npepps protein_coding protein_coding MGP_WSBEiJ_T0031202.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98682130 98687687 - Npepps protein_coding retained_intron MGP_WSBEiJ_T0031203.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98682155 98719596 - Npepps protein_coding retained_intron MGP_WSBEiJ_T0031204.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98682155 98760874 - MGP_WSBEiJ_P0031204 Npepps protein_coding protein_coding MGP_WSBEiJ_T0031205.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98682380 98688519 - Npepps protein_coding retained_intron MGP_WSBEiJ_T0031206.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98688760 98701449 - Npepps protein_coding retained_intron MGP_WSBEiJ_T0031207.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98701078 98703258 - Npepps protein_coding retained_intron MGP_WSBEiJ_T0031208.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98706087 98712806 - Npepps protein_coding retained_intron MGP_WSBEiJ_T0031209.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98708410 98719608 - Npepps protein_coding processed_transcript MGP_WSBEiJ_T0031210.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98708415 98720513 - MGP_WSBEiJ_P0031210 Npepps protein_coding protein_coding MGP_WSBEiJ_T0031211.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98712778 98746555 - MGP_WSBEiJ_P0031211 Npepps protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031212.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98719690 98720876 - Npepps protein_coding retained_intron MGP_WSBEiJ_T0031213.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98720363 98760850 - MGP_WSBEiJ_P0031213 Npepps protein_coding protein_coding MGP_WSBEiJ_T0031214.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98722156 98760955 - MGP_WSBEiJ_P0031214 Npepps protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031215.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98735422 98761018 - Npepps protein_coding retained_intron MGP_WSBEiJ_T0031216.1 MGP_WSBEiJ_G0018385.1 mouse_genomes_project 11 98736093 98746547 - MGP_WSBEiJ_P0031216 Npepps protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097266.1 MGP_WSBEiJ_G0035946.1 mouse_genomes_project 11 67880154 67881480 - Gm12305 sense_intronic sense_intronic MGP_WSBEiJ_T0028534.1 MGP_WSBEiJ_G0017742.1 mouse_genomes_project 11 58049851 58058544 + MGP_WSBEiJ_P0028534 protein_coding protein_coding MGP_WSBEiJ_T0028535.1 MGP_WSBEiJ_G0017742.1 mouse_genomes_project 11 58049897 58059077 + MGP_WSBEiJ_P0028535 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028536.1 MGP_WSBEiJ_G0017742.1 mouse_genomes_project 11 58050002 58058884 + MGP_WSBEiJ_P0028536 protein_coding protein_coding MGP_WSBEiJ_T0028537.1 MGP_WSBEiJ_G0017742.1 mouse_genomes_project 11 58050002 58058884 + MGP_WSBEiJ_P0028537 protein_coding protein_coding MGP_WSBEiJ_T0030021.1 MGP_WSBEiJ_G0018093.1 mouse_genomes_project 11 76467093 76618671 - MGP_WSBEiJ_P0030021 Nxn protein_coding protein_coding MGP_WSBEiJ_T0030022.1 MGP_WSBEiJ_G0018093.1 mouse_genomes_project 11 76575060 76618599 - Nxn protein_coding processed_transcript MGP_WSBEiJ_T0030980.1 MGP_WSBEiJ_G0018324.1 mouse_genomes_project 11 95884981 95891252 + MGP_WSBEiJ_P0030980 Mrpl27 protein_coding protein_coding MGP_WSBEiJ_T0030981.1 MGP_WSBEiJ_G0018324.1 mouse_genomes_project 11 95884990 95891081 + Mrpl27 protein_coding processed_transcript MGP_WSBEiJ_T0030982.1 MGP_WSBEiJ_G0018324.1 mouse_genomes_project 11 95885225 95890784 + Mrpl27 protein_coding processed_transcript MGP_WSBEiJ_T0030983.1 MGP_WSBEiJ_G0018324.1 mouse_genomes_project 11 95885245 95890880 + Mrpl27 protein_coding processed_transcript MGP_WSBEiJ_T0033114.1 MGP_WSBEiJ_G0018833.1 mouse_genomes_project 11 122391057 122408790 - MGP_WSBEiJ_P0033114 Eif4a3 protein_coding protein_coding MGP_WSBEiJ_T0033115.1 MGP_WSBEiJ_G0018833.1 mouse_genomes_project 11 122391058 122391771 - Eif4a3 protein_coding processed_transcript MGP_WSBEiJ_T0033116.1 MGP_WSBEiJ_G0018833.1 mouse_genomes_project 11 122391058 122391705 - Eif4a3 protein_coding processed_transcript MGP_WSBEiJ_T0033117.1 MGP_WSBEiJ_G0018833.1 mouse_genomes_project 11 122397606 122400129 - Eif4a3 protein_coding processed_transcript MGP_WSBEiJ_T0033118.1 MGP_WSBEiJ_G0018833.1 mouse_genomes_project 11 122399428 122408715 - MGP_WSBEiJ_P0033118 Eif4a3 protein_coding protein_coding MGP_WSBEiJ_T0033119.1 MGP_WSBEiJ_G0018833.1 mouse_genomes_project 11 122404224 122408719 - Eif4a3 protein_coding processed_transcript MGP_WSBEiJ_T0029027.1 MGP_WSBEiJ_G0017856.1 mouse_genomes_project 11 67360694 67376467 + MGP_WSBEiJ_P0029027 Gsg1l2 protein_coding protein_coding MGP_WSBEiJ_T0029028.1 MGP_WSBEiJ_G0017856.1 mouse_genomes_project 11 67367016 67371913 + MGP_WSBEiJ_P0029028 Gsg1l2 protein_coding protein_coding MGP_WSBEiJ_T0028985.1 MGP_WSBEiJ_G0017843.1 mouse_genomes_project 11 66451294 66470694 + MGP_WSBEiJ_P0028985 Pirt protein_coding protein_coding MGP_WSBEiJ_T0030173.1 MGP_WSBEiJ_G0018122.1 mouse_genomes_project 11 78386596 78395698 - Eral1 protein_coding retained_intron MGP_WSBEiJ_T0030174.1 MGP_WSBEiJ_G0018122.1 mouse_genomes_project 11 78386596 78395698 - MGP_WSBEiJ_P0030174 Eral1 protein_coding protein_coding MGP_WSBEiJ_T0030175.1 MGP_WSBEiJ_G0018122.1 mouse_genomes_project 11 78387751 78389192 - Eral1 protein_coding retained_intron MGP_WSBEiJ_T0028982.1 MGP_WSBEiJ_G0017842.1 mouse_genomes_project 11 65720612 66050029 - MGP_WSBEiJ_P0028982 Shisa6 protein_coding protein_coding MGP_WSBEiJ_T0028983.1 MGP_WSBEiJ_G0017842.1 mouse_genomes_project 11 65726352 66050198 - MGP_WSBEiJ_P0028983 Shisa6 protein_coding protein_coding MGP_WSBEiJ_T0028984.1 MGP_WSBEiJ_G0017842.1 mouse_genomes_project 11 65896987 66027085 - Shisa6 protein_coding processed_transcript MGP_WSBEiJ_T0097728.1 MGP_WSBEiJ_G0036391.1 mouse_genomes_project 11 96234422 96234547 + Gm22456 snRNA snRNA MGP_WSBEiJ_T0028502.1 MGP_WSBEiJ_G0017720.1 mouse_genomes_project 11 57513588 57516367 - MGP_WSBEiJ_P0028502 protein_coding protein_coding MGP_WSBEiJ_T0028503.1 MGP_WSBEiJ_G0017720.1 mouse_genomes_project 11 57514225 57516381 - MGP_WSBEiJ_P0028503 protein_coding protein_coding MGP_WSBEiJ_T0031100.1 MGP_WSBEiJ_G0018360.1 mouse_genomes_project 11 97685335 97688692 + MGP_WSBEiJ_P0031100 Hoxb8 protein_coding protein_coding MGP_WSBEiJ_T0031101.1 MGP_WSBEiJ_G0018360.1 mouse_genomes_project 11 97685986 97687692 + MGP_WSBEiJ_P0031101 Hoxb8 protein_coding protein_coding MGP_WSBEiJ_T0031102.1 MGP_WSBEiJ_G0018360.1 mouse_genomes_project 11 97686155 97688070 + MGP_WSBEiJ_P0031102 Hoxb8 protein_coding protein_coding MGP_WSBEiJ_T0009572.1 MGP_WSBEiJ_G0007729.1 mouse_genomes_project 11 78499135 78499196 + Mir7653 miRNA miRNA MGP_WSBEiJ_T0012284.1 MGP_WSBEiJ_G0010414.1 mouse_genomes_project 11 27010151 27010409 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012323.1 MGP_WSBEiJ_G0010453.1 mouse_genomes_project 11 44078915 44079304 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032447.1 MGP_WSBEiJ_G0018699.1 mouse_genomes_project 11 112622356 112705326 - MGP_WSBEiJ_P0032447 Abca6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0032448.1 MGP_WSBEiJ_G0018699.1 mouse_genomes_project 11 112690304 112706645 - Abca6 protein_coding processed_transcript MGP_WSBEiJ_T0006283.1 MGP_WSBEiJ_G0005236.1 mouse_genomes_project 11 122170544 122174839 + Gm26508 lincRNA lincRNA MGP_WSBEiJ_T0028947.1 MGP_WSBEiJ_G0017834.1 mouse_genomes_project 11 63888602 63981376 + MGP_WSBEiJ_P0028947 Hs3st3a1 protein_coding protein_coding MGP_WSBEiJ_T0097697.1 MGP_WSBEiJ_G0036360.1 mouse_genomes_project 11 59984778 59984875 + Gm23341 snRNA snRNA MGP_WSBEiJ_T0009617.1 MGP_WSBEiJ_G0007774.1 mouse_genomes_project 11 120048720 120048830 + Mir6516 miRNA miRNA MGP_WSBEiJ_T0012282.1 MGP_WSBEiJ_G0010412.1 mouse_genomes_project 11 26989429 26990369 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027225.1 MGP_WSBEiJ_G0017388.1 mouse_genomes_project 11 3228003 3236855 - MGP_WSBEiJ_P0027225 Ddx56 protein_coding protein_coding MGP_WSBEiJ_T0027226.1 MGP_WSBEiJ_G0017388.1 mouse_genomes_project 11 3234387 3235475 - Ddx56 protein_coding retained_intron MGP_WSBEiJ_T0027227.1 MGP_WSBEiJ_G0017388.1 mouse_genomes_project 11 3234719 3236855 - MGP_WSBEiJ_P0027227 Ddx56 protein_coding protein_coding MGP_WSBEiJ_T0027228.1 MGP_WSBEiJ_G0017388.1 mouse_genomes_project 11 3236128 3236829 - Ddx56 protein_coding retained_intron MGP_WSBEiJ_T0031968.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104468613 104485713 - MGP_WSBEiJ_P0031968 Itga2b protein_coding protein_coding MGP_WSBEiJ_T0031969.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104468620 104471507 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031970.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104471155 104473149 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031971.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104471213 104474394 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031972.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104471788 104483029 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031973.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104473028 104474188 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031974.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104473338 104476664 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031975.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104477040 104477766 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031976.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104482116 104482785 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031977.1 MGP_WSBEiJ_G0018591.1 mouse_genomes_project 11 104483629 104485952 - Itga2b protein_coding processed_transcript MGP_WSBEiJ_T0031965.1 MGP_WSBEiJ_G0018590.1 mouse_genomes_project 11 104451851 104462512 - MGP_WSBEiJ_P0031965 Fam171a2 protein_coding protein_coding MGP_WSBEiJ_T0031966.1 MGP_WSBEiJ_G0018590.1 mouse_genomes_project 11 104453618 104454648 - Fam171a2 protein_coding processed_transcript MGP_WSBEiJ_T0031967.1 MGP_WSBEiJ_G0018590.1 mouse_genomes_project 11 104455103 104462424 - Fam171a2 protein_coding processed_transcript MGP_WSBEiJ_T0012255.1 MGP_WSBEiJ_G0010385.1 mouse_genomes_project 11 18007543 18008073 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027738.1 MGP_WSBEiJ_G0017505.1 mouse_genomes_project 11 30297966 30395698 + MGP_WSBEiJ_P0027738 Stk10 protein_coding protein_coding MGP_WSBEiJ_T0027739.1 MGP_WSBEiJ_G0017505.1 mouse_genomes_project 11 30359399 30369286 + Stk10 protein_coding retained_intron MGP_WSBEiJ_T0006087.1 MGP_WSBEiJ_G0005083.1 mouse_genomes_project 11 15950776 15954941 - Gm28401 lincRNA lincRNA MGP_WSBEiJ_T0006088.1 MGP_WSBEiJ_G0005083.1 mouse_genomes_project 11 15950871 15954960 - Gm28401 lincRNA lincRNA MGP_WSBEiJ_T0029562.1 MGP_WSBEiJ_G0017972.1 mouse_genomes_project 11 70486170 70489773 + MGP_WSBEiJ_P0029562 Eno3 protein_coding protein_coding MGP_WSBEiJ_T0029563.1 MGP_WSBEiJ_G0017972.1 mouse_genomes_project 11 70486170 70491490 + MGP_WSBEiJ_P0029563 Eno3 protein_coding protein_coding MGP_WSBEiJ_T0029564.1 MGP_WSBEiJ_G0017972.1 mouse_genomes_project 11 70486172 70491490 + MGP_WSBEiJ_P0029564 Eno3 protein_coding protein_coding MGP_WSBEiJ_T0029565.1 MGP_WSBEiJ_G0017972.1 mouse_genomes_project 11 70486253 70487386 + MGP_WSBEiJ_P0029565 Eno3 protein_coding protein_coding MGP_WSBEiJ_T0029566.1 MGP_WSBEiJ_G0017972.1 mouse_genomes_project 11 70486655 70487415 + MGP_WSBEiJ_P0029566 Eno3 protein_coding protein_coding MGP_WSBEiJ_T0029567.1 MGP_WSBEiJ_G0017972.1 mouse_genomes_project 11 70486763 70491487 + MGP_WSBEiJ_P0029567 Eno3 protein_coding protein_coding MGP_WSBEiJ_T0029568.1 MGP_WSBEiJ_G0017972.1 mouse_genomes_project 11 70487306 70489812 + Eno3 protein_coding retained_intron MGP_WSBEiJ_T0029569.1 MGP_WSBEiJ_G0017972.1 mouse_genomes_project 11 70489740 70491241 + MGP_WSBEiJ_P0029569 Eno3 protein_coding protein_coding MGP_WSBEiJ_T0028948.1 MGP_WSBEiJ_G0017835.1 mouse_genomes_project 11 64454277 64477680 + MGP_WSBEiJ_P0028948 Elac2 protein_coding protein_coding MGP_WSBEiJ_T0028949.1 MGP_WSBEiJ_G0017835.1 mouse_genomes_project 11 64454310 64476938 + MGP_WSBEiJ_P0028949 Elac2 protein_coding protein_coding MGP_WSBEiJ_T0028950.1 MGP_WSBEiJ_G0017835.1 mouse_genomes_project 11 64454311 64455873 + Elac2 protein_coding processed_transcript MGP_WSBEiJ_T0028951.1 MGP_WSBEiJ_G0017835.1 mouse_genomes_project 11 64454313 64477210 + MGP_WSBEiJ_P0028951 Elac2 protein_coding protein_coding MGP_WSBEiJ_T0028952.1 MGP_WSBEiJ_G0017835.1 mouse_genomes_project 11 64454330 64477678 + Elac2 protein_coding processed_transcript MGP_WSBEiJ_T0028953.1 MGP_WSBEiJ_G0017835.1 mouse_genomes_project 11 64460687 64467712 + MGP_WSBEiJ_P0028953 Elac2 protein_coding protein_coding MGP_WSBEiJ_T0028954.1 MGP_WSBEiJ_G0017835.1 mouse_genomes_project 11 64475945 64477499 + Elac2 protein_coding processed_transcript MGP_WSBEiJ_T0009579.1 MGP_WSBEiJ_G0007736.1 mouse_genomes_project 11 87950023 87950109 + Mir301 miRNA miRNA MGP_WSBEiJ_T0011122.1 MGP_WSBEiJ_G0009279.1 mouse_genomes_project 11 119776124 119776297 - Gm27401 misc_RNA misc_RNA MGP_WSBEiJ_T0003145.1 MGP_WSBEiJ_G0002922.1 mouse_genomes_project 11 69064498 69066792 - Kcnab3os antisense antisense MGP_WSBEiJ_T0098921.1 MGP_WSBEiJ_G0037584.1 mouse_genomes_project 11 55410475 55410571 + Gm22603 snoRNA snoRNA MGP_WSBEiJ_T0031463.1 MGP_WSBEiJ_G0018452.1 mouse_genomes_project 11 101215298 101230400 - MGP_WSBEiJ_P0031463 Krt23 protein_coding protein_coding MGP_WSBEiJ_T0030410.1 MGP_WSBEiJ_G0018180.1 mouse_genomes_project 11 82421518 82427322 + 5530401A14Rik protein_coding processed_transcript MGP_WSBEiJ_T0030411.1 MGP_WSBEiJ_G0018180.1 mouse_genomes_project 11 82421524 82458758 + MGP_WSBEiJ_P0030411 5530401A14Rik protein_coding protein_coding MGP_WSBEiJ_T0003212.1 MGP_WSBEiJ_G0002975.1 mouse_genomes_project 11 100470217 100484669 - Gm12359 antisense antisense MGP_WSBEiJ_T0003213.1 MGP_WSBEiJ_G0002975.1 mouse_genomes_project 11 100470819 100484669 - Gm12359 antisense antisense MGP_WSBEiJ_T0003214.1 MGP_WSBEiJ_G0002975.1 mouse_genomes_project 11 100477168 100484640 - Gm12359 antisense antisense MGP_WSBEiJ_T0027533.1 MGP_WSBEiJ_G0017459.1 mouse_genomes_project 11 20973005 21044225 - MGP_WSBEiJ_P0027533 0610010F05Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027534.1 MGP_WSBEiJ_G0017459.1 mouse_genomes_project 11 20981883 21044349 - MGP_WSBEiJ_P0027534 0610010F05Rik protein_coding protein_coding MGP_WSBEiJ_T0027535.1 MGP_WSBEiJ_G0017459.1 mouse_genomes_project 11 20985272 21005372 - MGP_WSBEiJ_P0027535 0610010F05Rik protein_coding protein_coding MGP_WSBEiJ_T0027536.1 MGP_WSBEiJ_G0017459.1 mouse_genomes_project 11 21039554 21044307 - MGP_WSBEiJ_P0027536 0610010F05Rik protein_coding protein_coding MGP_WSBEiJ_T0027958.1 MGP_WSBEiJ_G0017571.1 mouse_genomes_project 11 47145107 47149866 + Rack1 protein_coding retained_intron MGP_WSBEiJ_T0027959.1 MGP_WSBEiJ_G0017571.1 mouse_genomes_project 11 47145132 47150980 + Rack1 protein_coding processed_transcript MGP_WSBEiJ_T0027960.1 MGP_WSBEiJ_G0017571.1 mouse_genomes_project 11 47145135 47151326 + MGP_WSBEiJ_P0027960 Rack1 protein_coding protein_coding MGP_WSBEiJ_T0027961.1 MGP_WSBEiJ_G0017571.1 mouse_genomes_project 11 47145149 47147443 + Rack1 protein_coding retained_intron MGP_WSBEiJ_T0027962.1 MGP_WSBEiJ_G0017571.1 mouse_genomes_project 11 47147927 47150965 + Rack1 protein_coding processed_transcript MGP_WSBEiJ_T0027963.1 MGP_WSBEiJ_G0017571.1 mouse_genomes_project 11 47150339 47150985 + Rack1 protein_coding processed_transcript MGP_WSBEiJ_T0009602.1 MGP_WSBEiJ_G0007759.1 mouse_genomes_project 11 104219215 104219326 - Mir8101 miRNA miRNA MGP_WSBEiJ_T0031478.1 MGP_WSBEiJ_G0018465.1 mouse_genomes_project 11 101352487 101352974 - MGP_WSBEiJ_P0031478 protein_coding protein_coding MGP_WSBEiJ_T0100495.1 MGP_WSBEiJ_G0038954.1 mouse_genomes_project 11 101417152 101417362 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0029326.1 MGP_WSBEiJ_G0017927.1 mouse_genomes_project 11 69658735 69677819 - MGP_WSBEiJ_P0029326 Acap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029327.1 MGP_WSBEiJ_G0017927.1 mouse_genomes_project 11 69658743 69667407 - MGP_WSBEiJ_P0029327 Acap1 protein_coding protein_coding MGP_WSBEiJ_T0029328.1 MGP_WSBEiJ_G0017927.1 mouse_genomes_project 11 69658743 69672553 - MGP_WSBEiJ_P0029328 Acap1 protein_coding protein_coding MGP_WSBEiJ_T0029329.1 MGP_WSBEiJ_G0017927.1 mouse_genomes_project 11 69660660 69665595 - Acap1 protein_coding processed_transcript MGP_WSBEiJ_T0029330.1 MGP_WSBEiJ_G0017927.1 mouse_genomes_project 11 69666449 69667567 - Acap1 protein_coding processed_transcript MGP_WSBEiJ_T0016651.1 MGP_WSBEiJ_G0014618.1 mouse_genomes_project 11 99102232 99129997 + 2410003L11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016652.1 MGP_WSBEiJ_G0014618.1 mouse_genomes_project 11 99121759 99125753 + 2410003L11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0030512.1 MGP_WSBEiJ_G0018213.1 mouse_genomes_project 11 84252429 84258168 - MGP_WSBEiJ_P0030512 Ccl9 protein_coding protein_coding MGP_WSBEiJ_T0030513.1 MGP_WSBEiJ_G0018213.1 mouse_genomes_project 11 84254849 84256674 - Ccl9 protein_coding processed_transcript MGP_WSBEiJ_T0003108.1 MGP_WSBEiJ_G0002892.1 mouse_genomes_project 11 58558738 58563183 + Gm15755 antisense antisense MGP_WSBEiJ_T0029809.1 MGP_WSBEiJ_G0018035.1 mouse_genomes_project 11 73882570 73886891 - MGP_WSBEiJ_P0029809 Olfr391-ps protein_coding protein_coding MGP_WSBEiJ_T0003182.1 MGP_WSBEiJ_G0002951.1 mouse_genomes_project 11 88936628 88981110 - Gm11508 antisense antisense MGP_WSBEiJ_T0029558.1 MGP_WSBEiJ_G0017971.1 mouse_genomes_project 11 70480318 70483108 - MGP_WSBEiJ_P0029558 Pfn1 protein_coding protein_coding MGP_WSBEiJ_T0029559.1 MGP_WSBEiJ_G0017971.1 mouse_genomes_project 11 70480403 70483085 - MGP_WSBEiJ_P0029559 Pfn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029560.1 MGP_WSBEiJ_G0017971.1 mouse_genomes_project 11 70481075 70483072 - Pfn1 protein_coding retained_intron MGP_WSBEiJ_T0029561.1 MGP_WSBEiJ_G0017971.1 mouse_genomes_project 11 70481085 70483062 - MGP_WSBEiJ_P0029561 Pfn1 protein_coding protein_coding MGP_WSBEiJ_T0032259.1 MGP_WSBEiJ_G0018658.1 mouse_genomes_project 11 108504926 108506532 - MGP_WSBEiJ_P0032259 Gh protein_coding protein_coding MGP_WSBEiJ_T0003121.1 MGP_WSBEiJ_G0002903.1 mouse_genomes_project 11 61925041 61926940 - Gm12280 antisense antisense MGP_WSBEiJ_T0029001.1 MGP_WSBEiJ_G0017848.1 mouse_genomes_project 11 66723239 66750633 + MGP_WSBEiJ_P0029001 Myh2 protein_coding protein_coding MGP_WSBEiJ_T0029002.1 MGP_WSBEiJ_G0017848.1 mouse_genomes_project 11 66723278 66726833 + Myh2 protein_coding retained_intron MGP_WSBEiJ_T0029003.1 MGP_WSBEiJ_G0017848.1 mouse_genomes_project 11 66723432 66750630 + MGP_WSBEiJ_P0029003 Myh2 protein_coding protein_coding MGP_WSBEiJ_T0033363.1 MGP_WSBEiJ_G0018878.1 mouse_genomes_project 11 123907576 123914761 + MGP_WSBEiJ_P0033363 Lrrc45 protein_coding protein_coding MGP_WSBEiJ_T0033364.1 MGP_WSBEiJ_G0018878.1 mouse_genomes_project 11 123907602 123914756 + MGP_WSBEiJ_P0033364 Lrrc45 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033365.1 MGP_WSBEiJ_G0018878.1 mouse_genomes_project 11 123907629 123909206 + MGP_WSBEiJ_P0033365 Lrrc45 protein_coding protein_coding MGP_WSBEiJ_T0033366.1 MGP_WSBEiJ_G0018878.1 mouse_genomes_project 11 123911162 123913608 + Lrrc45 protein_coding retained_intron MGP_WSBEiJ_T0033367.1 MGP_WSBEiJ_G0018878.1 mouse_genomes_project 11 123913366 123914545 + Lrrc45 protein_coding retained_intron MGP_WSBEiJ_T0011597.1 MGP_WSBEiJ_G0009752.1 mouse_genomes_project 11 73487868 73488802 - MGP_WSBEiJ_P0011597 Olfr379-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0009504.1 MGP_WSBEiJ_G0007661.1 mouse_genomes_project 11 3376451 3376515 + Mir7651 miRNA miRNA MGP_WSBEiJ_T0006150.1 MGP_WSBEiJ_G0005138.1 mouse_genomes_project 11 56515563 56517660 + Gm12243 lincRNA lincRNA MGP_WSBEiJ_T0003100.1 MGP_WSBEiJ_G0002885.1 mouse_genomes_project 11 54662264 54985329 + antisense antisense MGP_WSBEiJ_T0027232.1 MGP_WSBEiJ_G0017390.1 mouse_genomes_project 11 3264073 3328286 + MGP_WSBEiJ_P0027232 Ogdh protein_coding unknown_likely_coding MGP_WSBEiJ_T0027233.1 MGP_WSBEiJ_G0017390.1 mouse_genomes_project 11 3264083 3329253 + MGP_WSBEiJ_P0027233 Ogdh protein_coding protein_coding MGP_WSBEiJ_T0027234.1 MGP_WSBEiJ_G0017390.1 mouse_genomes_project 11 3264091 3270129 + Ogdh protein_coding retained_intron MGP_WSBEiJ_T0027235.1 MGP_WSBEiJ_G0017390.1 mouse_genomes_project 11 3264116 3329189 + MGP_WSBEiJ_P0027235 Ogdh protein_coding protein_coding MGP_WSBEiJ_T0027236.1 MGP_WSBEiJ_G0017390.1 mouse_genomes_project 11 3264118 3329203 + MGP_WSBEiJ_P0027236 Ogdh protein_coding protein_coding MGP_WSBEiJ_T0027237.1 MGP_WSBEiJ_G0017390.1 mouse_genomes_project 11 3264435 3286117 + MGP_WSBEiJ_P0027237 Ogdh protein_coding protein_coding MGP_WSBEiJ_T0027238.1 MGP_WSBEiJ_G0017390.1 mouse_genomes_project 11 3264622 3286001 + MGP_WSBEiJ_P0027238 Ogdh protein_coding protein_coding MGP_WSBEiJ_T0027239.1 MGP_WSBEiJ_G0017390.1 mouse_genomes_project 11 3265055 3329203 + MGP_WSBEiJ_P0027239 Ogdh protein_coding protein_coding MGP_WSBEiJ_T0032173.1 MGP_WSBEiJ_G0018637.1 mouse_genomes_project 11 107314716 107315085 + MGP_WSBEiJ_P0032173 Gm10842 protein_coding protein_coding MGP_WSBEiJ_T0028435.1 MGP_WSBEiJ_G0017696.1 mouse_genomes_project 11 54345952 54366638 + G3bp1 protein_coding processed_transcript MGP_WSBEiJ_T0028436.1 MGP_WSBEiJ_G0017696.1 mouse_genomes_project 11 54345971 54377098 + MGP_WSBEiJ_P0028436 G3bp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012244.1 MGP_WSBEiJ_G0010374.1 mouse_genomes_project 11 15402033 15402565 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012266.1 MGP_WSBEiJ_G0010396.1 mouse_genomes_project 11 19976003 19976293 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009560.1 MGP_WSBEiJ_G0007717.1 mouse_genomes_project 11 72639681 72639754 + Gm25678 miRNA miRNA MGP_WSBEiJ_T0031338.1 MGP_WSBEiJ_G0018416.1 mouse_genomes_project 11 99968608 99970341 + MGP_WSBEiJ_P0031338 Pnmt protein_coding protein_coding MGP_WSBEiJ_T0031339.1 MGP_WSBEiJ_G0018416.1 mouse_genomes_project 11 99968870 99969641 + Pnmt protein_coding processed_transcript MGP_WSBEiJ_T0011114.1 MGP_WSBEiJ_G0009271.1 mouse_genomes_project 11 90137102 90137364 - Gm24734 misc_RNA misc_RNA MGP_WSBEiJ_T0029034.1 MGP_WSBEiJ_G0017858.1 mouse_genomes_project 11 67443958 67509794 - MGP_WSBEiJ_P0029034 Usp43 protein_coding protein_coding MGP_WSBEiJ_T0029035.1 MGP_WSBEiJ_G0017858.1 mouse_genomes_project 11 67443958 67509794 - MGP_WSBEiJ_P0029035 Usp43 protein_coding protein_coding MGP_WSBEiJ_T0029036.1 MGP_WSBEiJ_G0017858.1 mouse_genomes_project 11 67444792 67459729 - Usp43 protein_coding retained_intron MGP_WSBEiJ_T0029037.1 MGP_WSBEiJ_G0017858.1 mouse_genomes_project 11 67482374 67508850 - Usp43 protein_coding processed_transcript MGP_WSBEiJ_T0012446.1 MGP_WSBEiJ_G0010576.1 mouse_genomes_project 11 94823251 94824462 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027980.1 MGP_WSBEiJ_G0017577.1 mouse_genomes_project 11 47419716 47448676 - MGP_WSBEiJ_P0027980 protein_coding protein_coding MGP_WSBEiJ_T0027983.1 MGP_WSBEiJ_G0017577.1 mouse_genomes_project 11 47436322 47448573 - MGP_WSBEiJ_P0027983 protein_coding protein_coding MGP_WSBEiJ_T0030818.1 MGP_WSBEiJ_G0018285.1 mouse_genomes_project 11 89908276 89940188 - MGP_WSBEiJ_P0030818 Scpep1 protein_coding protein_coding MGP_WSBEiJ_T0009606.1 MGP_WSBEiJ_G0007763.1 mouse_genomes_project 11 106371643 106371714 - miRNA miRNA MGP_WSBEiJ_T0012412.1 MGP_WSBEiJ_G0010542.1 mouse_genomes_project 11 78922627 78922909 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029438.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70009783 70013440 + MGP_WSBEiJ_P0029438 Slc16a11 protein_coding protein_coding MGP_WSBEiJ_T0029439.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70010936 70013439 + MGP_WSBEiJ_P0029439 Slc16a11 protein_coding protein_coding MGP_WSBEiJ_T0029440.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011025 70011881 + Slc16a11 protein_coding retained_intron MGP_WSBEiJ_T0029441.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011106 70013440 + MGP_WSBEiJ_P0029441 Slc16a11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029442.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011141 70013441 + MGP_WSBEiJ_P0029442 Slc16a11 protein_coding protein_coding MGP_WSBEiJ_T0029443.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011145 70013444 + MGP_WSBEiJ_P0029443 Slc16a11 protein_coding protein_coding MGP_WSBEiJ_T0029444.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011145 70012559 + MGP_WSBEiJ_P0029444 Slc16a11 protein_coding protein_coding MGP_WSBEiJ_T0029445.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011147 70012014 + MGP_WSBEiJ_P0029445 Slc16a11 protein_coding protein_coding MGP_WSBEiJ_T0029446.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011148 70012702 + Slc16a11 protein_coding processed_transcript MGP_WSBEiJ_T0029447.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011588 70012507 + Slc16a11 protein_coding retained_intron MGP_WSBEiJ_T0029448.1 MGP_WSBEiJ_G0017946.1 mouse_genomes_project 11 70011844 70013440 + Slc16a11 protein_coding retained_intron MGP_WSBEiJ_T0030700.1 MGP_WSBEiJ_G0018260.1 mouse_genomes_project 11 87946253 87961625 + MGP_WSBEiJ_P0030700 Ska2 protein_coding protein_coding MGP_WSBEiJ_T0030701.1 MGP_WSBEiJ_G0018260.1 mouse_genomes_project 11 87946270 87961624 + Ska2 protein_coding processed_transcript MGP_WSBEiJ_T0030702.1 MGP_WSBEiJ_G0018260.1 mouse_genomes_project 11 87952888 87959097 + Ska2 protein_coding processed_transcript MGP_WSBEiJ_T0027012.1 MGP_WSBEiJ_G0017340.1 mouse_genomes_project 11 850074 865494 + MGP_WSBEiJ_P0027012 Gal3st1 protein_coding protein_coding MGP_WSBEiJ_T0027013.1 MGP_WSBEiJ_G0017340.1 mouse_genomes_project 11 850151 865483 + MGP_WSBEiJ_P0027013 Gal3st1 protein_coding protein_coding MGP_WSBEiJ_T0027014.1 MGP_WSBEiJ_G0017340.1 mouse_genomes_project 11 856367 865476 + MGP_WSBEiJ_P0027014 Gal3st1 protein_coding protein_coding MGP_WSBEiJ_T0006284.1 MGP_WSBEiJ_G0005237.1 mouse_genomes_project 11 122199197 122204050 - Gm11754 lincRNA lincRNA MGP_WSBEiJ_T0030510.1 MGP_WSBEiJ_G0018212.1 mouse_genomes_project 11 84201240 84206003 - MGP_WSBEiJ_P0030510 Ccl5 protein_coding protein_coding MGP_WSBEiJ_T0030511.1 MGP_WSBEiJ_G0018212.1 mouse_genomes_project 11 84204196 84205998 - Ccl5 protein_coding retained_intron MGP_WSBEiJ_T0003090.1 MGP_WSBEiJ_G0002877.1 mouse_genomes_project 11 52463786 52464452 - Gm12214 antisense antisense MGP_WSBEiJ_T0028425.1 MGP_WSBEiJ_G0017693.1 mouse_genomes_project 11 54105557 54201677 - MGP_WSBEiJ_P0028425 Fat2 protein_coding protein_coding MGP_WSBEiJ_T0028426.1 MGP_WSBEiJ_G0017693.1 mouse_genomes_project 11 54105558 54176490 - MGP_WSBEiJ_P0028426 Fat2 protein_coding protein_coding MGP_WSBEiJ_T0100470.1 MGP_WSBEiJ_G0038929.1 mouse_genomes_project 11 52707010 52707182 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0031454.1 MGP_WSBEiJ_G0018444.1 mouse_genomes_project 11 101005384 101011849 - MGP_WSBEiJ_P0031454 Krt24 protein_coding protein_coding MGP_WSBEiJ_T0003248.1 MGP_WSBEiJ_G0003004.1 mouse_genomes_project 11 109438334 109450848 + Gm11715 antisense antisense MGP_WSBEiJ_T0032283.1 MGP_WSBEiJ_G0018665.1 mouse_genomes_project 11 108908989 108976449 - MGP_WSBEiJ_P0032283 Pecam1 protein_coding protein_coding MGP_WSBEiJ_T0032284.1 MGP_WSBEiJ_G0018665.1 mouse_genomes_project 11 108908994 108976659 - MGP_WSBEiJ_P0032284 Pecam1 protein_coding protein_coding MGP_WSBEiJ_T0032285.1 MGP_WSBEiJ_G0018665.1 mouse_genomes_project 11 108917730 108919839 - Pecam1 protein_coding retained_intron MGP_WSBEiJ_T0032286.1 MGP_WSBEiJ_G0018665.1 mouse_genomes_project 11 108918322 109013748 - MGP_WSBEiJ_P0032286 Pecam1 protein_coding protein_coding MGP_WSBEiJ_T0032287.1 MGP_WSBEiJ_G0018665.1 mouse_genomes_project 11 108948192 108950715 - Pecam1 protein_coding retained_intron MGP_WSBEiJ_T0032288.1 MGP_WSBEiJ_G0018665.1 mouse_genomes_project 11 108950450 108976343 - MGP_WSBEiJ_P0032288 Pecam1 protein_coding protein_coding MGP_WSBEiJ_T0029548.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70475717 70476589 + Rnf167 protein_coding processed_transcript MGP_WSBEiJ_T0029549.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70475769 70479890 + MGP_WSBEiJ_P0029549 Rnf167 protein_coding protein_coding MGP_WSBEiJ_T0029550.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70475769 70479881 + MGP_WSBEiJ_P0029550 Rnf167 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029551.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70476037 70478248 + MGP_WSBEiJ_P0029551 Rnf167 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029552.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70476043 70479879 + Rnf167 protein_coding retained_intron MGP_WSBEiJ_T0029553.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70476051 70476737 + Rnf167 protein_coding retained_intron MGP_WSBEiJ_T0029554.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70476425 70478817 + Rnf167 protein_coding retained_intron MGP_WSBEiJ_T0029555.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70476557 70479560 + Rnf167 protein_coding retained_intron MGP_WSBEiJ_T0029556.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70477604 70478015 + Rnf167 protein_coding retained_intron MGP_WSBEiJ_T0029557.1 MGP_WSBEiJ_G0017970.1 mouse_genomes_project 11 70478418 70478817 + Rnf167 protein_coding retained_intron MGP_WSBEiJ_T0028630.1 MGP_WSBEiJ_G0017770.1 mouse_genomes_project 11 59154444 59168444 + MGP_WSBEiJ_P0028630 Med9 protein_coding protein_coding MGP_WSBEiJ_T0032985.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120803671 120818383 - MGP_WSBEiJ_P0032985 Tmc6 protein_coding protein_coding MGP_WSBEiJ_T0032986.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120803671 120817392 - MGP_WSBEiJ_P0032986 Tmc6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032987.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120803743 120806756 - Tmc6 protein_coding retained_intron MGP_WSBEiJ_T0032988.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120807757 120810813 - MGP_WSBEiJ_P0032988 Tmc6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032989.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120813118 120818365 - MGP_WSBEiJ_P0032989 Tmc6 protein_coding protein_coding MGP_WSBEiJ_T0032990.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120813478 120817394 - MGP_WSBEiJ_P0032990 Tmc6 protein_coding protein_coding MGP_WSBEiJ_T0032991.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120816485 120818688 - MGP_WSBEiJ_P0032991 Tmc6 protein_coding protein_coding MGP_WSBEiJ_T0032992.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120816681 120819942 - MGP_WSBEiJ_P0032992 Tmc6 protein_coding protein_coding MGP_WSBEiJ_T0032993.1 MGP_WSBEiJ_G0018804.1 mouse_genomes_project 11 120816935 120818402 - MGP_WSBEiJ_P0032993 Tmc6 protein_coding protein_coding MGP_WSBEiJ_T0012378.1 MGP_WSBEiJ_G0010508.1 mouse_genomes_project 11 63251128 63252410 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028967.1 MGP_WSBEiJ_G0017839.1 mouse_genomes_project 11 65175787 65279365 - MGP_WSBEiJ_P0028967 Map2k4 protein_coding protein_coding MGP_WSBEiJ_T0028968.1 MGP_WSBEiJ_G0017839.1 mouse_genomes_project 11 65177877 65208673 - MGP_WSBEiJ_P0028968 Map2k4 protein_coding protein_coding MGP_WSBEiJ_T0028969.1 MGP_WSBEiJ_G0017839.1 mouse_genomes_project 11 65179272 65184557 - Map2k4 protein_coding processed_transcript MGP_WSBEiJ_T0028970.1 MGP_WSBEiJ_G0017839.1 mouse_genomes_project 11 65183830 65279353 - MGP_WSBEiJ_P0028970 Map2k4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028971.1 MGP_WSBEiJ_G0017839.1 mouse_genomes_project 11 65201299 65279354 - MGP_WSBEiJ_P0028971 Map2k4 protein_coding protein_coding MGP_WSBEiJ_T0028972.1 MGP_WSBEiJ_G0017839.1 mouse_genomes_project 11 65201300 65279353 - MGP_WSBEiJ_P0028972 Map2k4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028973.1 MGP_WSBEiJ_G0017839.1 mouse_genomes_project 11 65208608 65234638 - Map2k4 protein_coding processed_transcript MGP_WSBEiJ_T0030115.1 MGP_WSBEiJ_G0018114.1 mouse_genomes_project 11 78012030 78016040 - Cryba1 protein_coding retained_intron MGP_WSBEiJ_T0030116.1 MGP_WSBEiJ_G0018114.1 mouse_genomes_project 11 78012042 78019489 - MGP_WSBEiJ_P0030116 Cryba1 protein_coding protein_coding MGP_WSBEiJ_T0003229.1 MGP_WSBEiJ_G0002987.1 mouse_genomes_project 11 103941579 103942296 + Gm20659 antisense antisense MGP_WSBEiJ_T0006258.1 MGP_WSBEiJ_G0005219.1 mouse_genomes_project 11 115392523 115400401 - Gm11681 lincRNA lincRNA MGP_WSBEiJ_T0100497.1 MGP_WSBEiJ_G0038956.1 mouse_genomes_project 11 101469601 101469738 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006117.1 MGP_WSBEiJ_G0005108.1 mouse_genomes_project 11 29502740 29527172 - D630024D03Rik lincRNA lincRNA MGP_WSBEiJ_T0006118.1 MGP_WSBEiJ_G0005108.1 mouse_genomes_project 11 29520715 29527121 - D630024D03Rik lincRNA lincRNA MGP_WSBEiJ_T0033000.1 MGP_WSBEiJ_G0018806.1 mouse_genomes_project 11 120835984 120846898 + MGP_WSBEiJ_P0033000 6030468B19Rik protein_coding protein_coding MGP_WSBEiJ_T0030098.1 MGP_WSBEiJ_G0018109.1 mouse_genomes_project 11 77775019 77780309 - MGP_WSBEiJ_P0030098 Trp53i13 protein_coding protein_coding MGP_WSBEiJ_T0030099.1 MGP_WSBEiJ_G0018109.1 mouse_genomes_project 11 77775531 77779702 - Trp53i13 protein_coding processed_transcript MGP_WSBEiJ_T0030100.1 MGP_WSBEiJ_G0018109.1 mouse_genomes_project 11 77775890 77779974 - Trp53i13 protein_coding processed_transcript MGP_WSBEiJ_T0030101.1 MGP_WSBEiJ_G0018109.1 mouse_genomes_project 11 77776021 77783976 - MGP_WSBEiJ_P0030101 Trp53i13 protein_coding protein_coding MGP_WSBEiJ_T0030102.1 MGP_WSBEiJ_G0018109.1 mouse_genomes_project 11 77779682 77784225 - Trp53i13 protein_coding processed_transcript MGP_WSBEiJ_T0027623.1 MGP_WSBEiJ_G0017478.1 mouse_genomes_project 11 27209097 27211759 - MGP_WSBEiJ_P0027623 Rps27a protein_coding protein_coding MGP_WSBEiJ_T0027624.1 MGP_WSBEiJ_G0017478.1 mouse_genomes_project 11 27209255 27211532 - Rps27a protein_coding processed_transcript MGP_WSBEiJ_T0027625.1 MGP_WSBEiJ_G0017478.1 mouse_genomes_project 11 27210765 27211541 - Rps27a protein_coding processed_transcript MGP_WSBEiJ_T0028860.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61644619 61794771 - MGP_WSBEiJ_P0028860 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028861.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61644619 61774477 - MGP_WSBEiJ_P0028861 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028862.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61644881 61709158 - MGP_WSBEiJ_P0028862 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028863.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61645792 61649202 - MGP_WSBEiJ_P0028863 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028864.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61645988 61774443 - MGP_WSBEiJ_P0028864 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028865.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61645988 61688215 - MGP_WSBEiJ_P0028865 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028866.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61645988 61688985 - MGP_WSBEiJ_P0028866 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028867.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61653261 61658599 - Ncor1 protein_coding retained_intron MGP_WSBEiJ_T0028868.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61653511 61658723 - Ncor1 protein_coding retained_intron MGP_WSBEiJ_T0028869.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61655134 61659497 - Ncor1 protein_coding retained_intron MGP_WSBEiJ_T0028870.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61669024 61674154 - Ncor1 protein_coding retained_intron MGP_WSBEiJ_T0028871.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61671588 61680591 - Ncor1 protein_coding processed_transcript MGP_WSBEiJ_T0028872.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61674037 61723094 - MGP_WSBEiJ_P0028872 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028873.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61683106 61698949 - Ncor1 protein_coding processed_transcript MGP_WSBEiJ_T0028874.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61696532 61774477 - Ncor1 protein_coding retained_intron MGP_WSBEiJ_T0028875.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61702913 61713813 - MGP_WSBEiJ_P0028875 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028876.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61702958 61715550 - MGP_WSBEiJ_P0028876 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028877.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61702978 61713962 - MGP_WSBEiJ_P0028877 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028878.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61702980 61795245 - MGP_WSBEiJ_P0028878 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028879.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61706207 61713871 - Ncor1 protein_coding retained_intron MGP_WSBEiJ_T0028880.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61715463 61774477 - MGP_WSBEiJ_P0028880 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028881.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61722483 61725665 - Ncor1 protein_coding retained_intron MGP_WSBEiJ_T0028882.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61725658 61732835 - Ncor1 protein_coding retained_intron MGP_WSBEiJ_T0028883.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61732689 61794762 - MGP_WSBEiJ_P0028883 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0028884.1 MGP_WSBEiJ_G0017815.1 mouse_genomes_project 11 61752798 61795980 - MGP_WSBEiJ_P0028884 Ncor1 protein_coding protein_coding MGP_WSBEiJ_T0098943.1 MGP_WSBEiJ_G0037606.1 mouse_genomes_project 11 80331362 80331494 - Gm24454 snoRNA snoRNA MGP_WSBEiJ_T0032109.1 MGP_WSBEiJ_G0018623.1 mouse_genomes_project 11 105872040 105916348 + MGP_WSBEiJ_P0032109 Wnt3 protein_coding protein_coding MGP_WSBEiJ_T0016624.1 MGP_WSBEiJ_G0014606.1 mouse_genomes_project 11 83957984 83960879 + AA465934 processed_transcript antisense MGP_WSBEiJ_T0016625.1 MGP_WSBEiJ_G0014606.1 mouse_genomes_project 11 83958005 83960880 + AA465934 processed_transcript antisense MGP_WSBEiJ_T0016626.1 MGP_WSBEiJ_G0014606.1 mouse_genomes_project 11 83958013 83958556 + AA465934 processed_transcript retained_intron MGP_WSBEiJ_T0016627.1 MGP_WSBEiJ_G0014606.1 mouse_genomes_project 11 83958027 83960877 + AA465934 processed_transcript antisense MGP_WSBEiJ_T0016628.1 MGP_WSBEiJ_G0014606.1 mouse_genomes_project 11 83958028 83960878 + AA465934 processed_transcript retained_intron MGP_WSBEiJ_T0031414.1 MGP_WSBEiJ_G0018435.1 mouse_genomes_project 11 100595929 100611187 + MGP_WSBEiJ_P0031414 Cdc6 protein_coding protein_coding MGP_WSBEiJ_T0031415.1 MGP_WSBEiJ_G0018435.1 mouse_genomes_project 11 100595977 100613571 + MGP_WSBEiJ_P0031415 Cdc6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031416.1 MGP_WSBEiJ_G0018435.1 mouse_genomes_project 11 100596279 100610030 + MGP_WSBEiJ_P0031416 Cdc6 protein_coding protein_coding MGP_WSBEiJ_T0031417.1 MGP_WSBEiJ_G0018435.1 mouse_genomes_project 11 100608602 100609598 + Cdc6 protein_coding retained_intron MGP_WSBEiJ_T0032794.1 MGP_WSBEiJ_G0018770.1 mouse_genomes_project 11 118990686 118993053 - Trim47 protein_coding processed_transcript MGP_WSBEiJ_T0032795.1 MGP_WSBEiJ_G0018770.1 mouse_genomes_project 11 118990686 118995167 - MGP_WSBEiJ_P0032795 Trim47 protein_coding protein_coding MGP_WSBEiJ_T0032796.1 MGP_WSBEiJ_G0018770.1 mouse_genomes_project 11 118990686 118995176 - MGP_WSBEiJ_P0032796 Trim47 protein_coding protein_coding MGP_WSBEiJ_T0032797.1 MGP_WSBEiJ_G0018770.1 mouse_genomes_project 11 118991143 118992018 - Trim47 protein_coding processed_transcript MGP_WSBEiJ_T0032798.1 MGP_WSBEiJ_G0018770.1 mouse_genomes_project 11 118991273 118992674 - Trim47 protein_coding processed_transcript MGP_WSBEiJ_T0032799.1 MGP_WSBEiJ_G0018770.1 mouse_genomes_project 11 118991326 118992969 - Trim47 protein_coding processed_transcript MGP_WSBEiJ_T0032800.1 MGP_WSBEiJ_G0018770.1 mouse_genomes_project 11 118992744 119014640 - Trim47 protein_coding processed_transcript MGP_WSBEiJ_T0027491.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20362152 20375535 + MGP_WSBEiJ_P0027491 Cct4 protein_coding protein_coding MGP_WSBEiJ_T0027492.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20362259 20366108 + MGP_WSBEiJ_P0027492 Cct4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027493.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20362272 20371602 + Cct4 protein_coding retained_intron MGP_WSBEiJ_T0027494.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20362283 20368823 + MGP_WSBEiJ_P0027494 Cct4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027495.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20362283 20374901 + MGP_WSBEiJ_P0027495 Cct4 protein_coding protein_coding MGP_WSBEiJ_T0027496.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20362285 20368876 + MGP_WSBEiJ_P0027496 Cct4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027497.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20367351 20368828 + Cct4 protein_coding retained_intron MGP_WSBEiJ_T0027498.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20372671 20373346 + Cct4 protein_coding processed_transcript MGP_WSBEiJ_T0027499.1 MGP_WSBEiJ_G0017453.1 mouse_genomes_project 11 20373682 20374605 + Cct4 protein_coding retained_intron MGP_WSBEiJ_T0031058.1 MGP_WSBEiJ_G0018346.1 mouse_genomes_project 11 97091808 97095114 + MGP_WSBEiJ_P0031058 B130006D01Rik protein_coding protein_coding MGP_WSBEiJ_T0003082.1 MGP_WSBEiJ_G0002869.1 mouse_genomes_project 11 49258660 49264113 - Gm12200 antisense antisense MGP_WSBEiJ_T0006274.1 MGP_WSBEiJ_G0005230.1 mouse_genomes_project 11 119997207 120003329 - Gm11728 lincRNA lincRNA MGP_WSBEiJ_T0006275.1 MGP_WSBEiJ_G0005230.1 mouse_genomes_project 11 120001485 120003324 - Gm11728 lincRNA lincRNA MGP_WSBEiJ_T0030778.1 MGP_WSBEiJ_G0018276.1 mouse_genomes_project 11 88830231 88831315 - MGP_WSBEiJ_P0030778 Olfr464 protein_coding protein_coding MGP_WSBEiJ_T0030779.1 MGP_WSBEiJ_G0018276.1 mouse_genomes_project 11 88830876 88832801 - MGP_WSBEiJ_P0030779 Olfr464 protein_coding protein_coding MGP_WSBEiJ_T0029495.1 MGP_WSBEiJ_G0017958.1 mouse_genomes_project 11 70267736 70273294 - MGP_WSBEiJ_P0029495 Cxcl16 protein_coding protein_coding MGP_WSBEiJ_T0029496.1 MGP_WSBEiJ_G0017958.1 mouse_genomes_project 11 70267991 70272718 - MGP_WSBEiJ_P0029496 Cxcl16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029497.1 MGP_WSBEiJ_G0017958.1 mouse_genomes_project 11 70268504 70273142 - Cxcl16 protein_coding retained_intron MGP_WSBEiJ_T0028893.1 MGP_WSBEiJ_G0017818.1 mouse_genomes_project 11 61910360 61912150 + MGP_WSBEiJ_P0028893 Ubb protein_coding protein_coding MGP_WSBEiJ_T0016622.1 MGP_WSBEiJ_G0014604.1 mouse_genomes_project 11 78623492 78624601 - Gm11193 processed_transcript processed_transcript MGP_WSBEiJ_T0009622.1 MGP_WSBEiJ_G0007779.1 mouse_genomes_project 11 122518601 122518691 + Mir1932 miRNA miRNA MGP_WSBEiJ_T0027015.1 MGP_WSBEiJ_G0017341.1 mouse_genomes_project 11 895289 907407 + Sec14l4 protein_coding processed_transcript MGP_WSBEiJ_T0027016.1 MGP_WSBEiJ_G0017341.1 mouse_genomes_project 11 895292 908673 + Sec14l4 protein_coding processed_transcript MGP_WSBEiJ_T0027017.1 MGP_WSBEiJ_G0017341.1 mouse_genomes_project 11 895439 908293 + Sec14l4 protein_coding processed_transcript MGP_WSBEiJ_T0027018.1 MGP_WSBEiJ_G0017341.1 mouse_genomes_project 11 895609 910808 + Sec14l4 protein_coding processed_transcript MGP_WSBEiJ_T0027019.1 MGP_WSBEiJ_G0017341.1 mouse_genomes_project 11 895609 912505 + Sec14l4 protein_coding processed_transcript MGP_WSBEiJ_T0027020.1 MGP_WSBEiJ_G0017341.1 mouse_genomes_project 11 895609 912505 + MGP_WSBEiJ_P0027020 Sec14l4 protein_coding protein_coding MGP_WSBEiJ_T0027021.1 MGP_WSBEiJ_G0017341.1 mouse_genomes_project 11 895668 910808 + Sec14l4 protein_coding processed_transcript MGP_WSBEiJ_T0027022.1 MGP_WSBEiJ_G0017341.1 mouse_genomes_project 11 905541 910808 + Sec14l4 protein_coding processed_transcript MGP_WSBEiJ_T0029358.1 MGP_WSBEiJ_G0017931.1 mouse_genomes_project 11 69695312 69699629 - MGP_WSBEiJ_P0029358 Eif5a protein_coding protein_coding MGP_WSBEiJ_T0029359.1 MGP_WSBEiJ_G0017931.1 mouse_genomes_project 11 69695719 69699168 - MGP_WSBEiJ_P0029359 Eif5a protein_coding protein_coding MGP_WSBEiJ_T0016653.1 MGP_WSBEiJ_G0014619.1 mouse_genomes_project 11 99151668 99167575 - Gm11613 processed_transcript processed_transcript MGP_WSBEiJ_T0031183.1 MGP_WSBEiJ_G0018381.1 mouse_genomes_project 11 98515883 98537707 + MGP_WSBEiJ_P0031183 Osbpl7 protein_coding protein_coding MGP_WSBEiJ_T0031184.1 MGP_WSBEiJ_G0018381.1 mouse_genomes_project 11 98516075 98518083 + Osbpl7 protein_coding processed_transcript MGP_WSBEiJ_T0031185.1 MGP_WSBEiJ_G0018381.1 mouse_genomes_project 11 98516075 98537707 + MGP_WSBEiJ_P0031185 Osbpl7 protein_coding protein_coding MGP_WSBEiJ_T0031186.1 MGP_WSBEiJ_G0018381.1 mouse_genomes_project 11 98517585 98518235 + Osbpl7 protein_coding retained_intron MGP_WSBEiJ_T0031187.1 MGP_WSBEiJ_G0018381.1 mouse_genomes_project 11 98519795 98523730 + Osbpl7 protein_coding retained_intron MGP_WSBEiJ_T0031188.1 MGP_WSBEiJ_G0018381.1 mouse_genomes_project 11 98535685 98537074 + Osbpl7 protein_coding retained_intron MGP_WSBEiJ_T0031221.1 MGP_WSBEiJ_G0018388.1 mouse_genomes_project 11 98847342 98885404 + MGP_WSBEiJ_P0031221 Socs7 protein_coding protein_coding MGP_WSBEiJ_T0031222.1 MGP_WSBEiJ_G0018388.1 mouse_genomes_project 11 98861613 98862844 + Socs7 protein_coding processed_transcript MGP_WSBEiJ_T0027075.1 MGP_WSBEiJ_G0017354.1 mouse_genomes_project 11 1514983 1516564 + MGP_WSBEiJ_P0027075 Gm11032 protein_coding protein_coding MGP_WSBEiJ_T0032459.1 MGP_WSBEiJ_G0018702.1 mouse_genomes_project 11 113470601 113533536 + MGP_WSBEiJ_P0032459 Kcnj16 protein_coding protein_coding MGP_WSBEiJ_T0032460.1 MGP_WSBEiJ_G0018702.1 mouse_genomes_project 11 113470601 113533539 + MGP_WSBEiJ_P0032460 Kcnj16 protein_coding protein_coding MGP_WSBEiJ_T0032461.1 MGP_WSBEiJ_G0018702.1 mouse_genomes_project 11 113470632 113530434 + MGP_WSBEiJ_P0032461 Kcnj16 protein_coding protein_coding MGP_WSBEiJ_T0032462.1 MGP_WSBEiJ_G0018702.1 mouse_genomes_project 11 113501853 113533539 + MGP_WSBEiJ_P0032462 Kcnj16 protein_coding protein_coding MGP_WSBEiJ_T0032463.1 MGP_WSBEiJ_G0018702.1 mouse_genomes_project 11 113529474 113530323 + MGP_WSBEiJ_P0032463 Kcnj16 protein_coding protein_coding MGP_WSBEiJ_T0032464.1 MGP_WSBEiJ_G0018702.1 mouse_genomes_project 11 113529474 113533536 + MGP_WSBEiJ_P0032464 Kcnj16 protein_coding protein_coding MGP_WSBEiJ_T0031490.1 MGP_WSBEiJ_G0018477.1 mouse_genomes_project 11 101548417 101550971 + MGP_WSBEiJ_P0031490 protein_coding protein_coding MGP_WSBEiJ_T0031991.1 MGP_WSBEiJ_G0018596.1 mouse_genomes_project 11 104719731 104734087 - MGP_WSBEiJ_P0031991 Ccdc43 protein_coding protein_coding MGP_WSBEiJ_T0031992.1 MGP_WSBEiJ_G0018596.1 mouse_genomes_project 11 104719733 104734039 - MGP_WSBEiJ_P0031992 Ccdc43 protein_coding protein_coding MGP_WSBEiJ_T0031993.1 MGP_WSBEiJ_G0018596.1 mouse_genomes_project 11 104721385 104733841 - Ccdc43 protein_coding processed_transcript MGP_WSBEiJ_T0031994.1 MGP_WSBEiJ_G0018596.1 mouse_genomes_project 11 104724426 104734039 - Ccdc43 protein_coding processed_transcript MGP_WSBEiJ_T0031995.1 MGP_WSBEiJ_G0018596.1 mouse_genomes_project 11 104725817 104733975 - Ccdc43 protein_coding processed_transcript MGP_WSBEiJ_T0012404.1 MGP_WSBEiJ_G0010534.1 mouse_genomes_project 11 75201332 75201676 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012258.1 MGP_WSBEiJ_G0010388.1 mouse_genomes_project 11 18508875 18509412 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012516.1 MGP_WSBEiJ_G0010646.1 mouse_genomes_project 11 125119641 125120068 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006104.1 MGP_WSBEiJ_G0005099.1 mouse_genomes_project 11 21924300 22005302 + 4933430M04Rik lincRNA lincRNA MGP_WSBEiJ_T0030991.1 MGP_WSBEiJ_G0018327.1 mouse_genomes_project 11 95980437 95983416 + MGP_WSBEiJ_P0030991 Cdc34b protein_coding protein_coding MGP_WSBEiJ_T0030992.1 MGP_WSBEiJ_G0018327.1 mouse_genomes_project 11 95980437 95983440 + MGP_WSBEiJ_P0030992 Cdc34b protein_coding protein_coding MGP_WSBEiJ_T0030518.1 MGP_WSBEiJ_G0018216.1 mouse_genomes_project 11 84330537 84332049 - MGP_WSBEiJ_P0030518 Ccl3 protein_coding protein_coding MGP_WSBEiJ_T0006180.1 MGP_WSBEiJ_G0005163.1 mouse_genomes_project 11 71651759 71653794 - Gm12325 lincRNA lincRNA MGP_WSBEiJ_T0028476.1 MGP_WSBEiJ_G0017710.1 mouse_genomes_project 11 57187728 57216407 + MGP_WSBEiJ_P0028476 Irgm2 protein_coding protein_coding MGP_WSBEiJ_T0028478.1 MGP_WSBEiJ_G0017710.1 mouse_genomes_project 11 57208174 57216415 + MGP_WSBEiJ_P0028478 Irgm2 protein_coding protein_coding MGP_WSBEiJ_T0031863.1 MGP_WSBEiJ_G0018577.1 mouse_genomes_project 11 104136890 104140749 - MGP_WSBEiJ_P0031863 Tmem101 protein_coding protein_coding MGP_WSBEiJ_T0031864.1 MGP_WSBEiJ_G0018577.1 mouse_genomes_project 11 104138518 104140692 - Tmem101 protein_coding processed_transcript MGP_WSBEiJ_T0031865.1 MGP_WSBEiJ_G0018577.1 mouse_genomes_project 11 104140159 104140700 - Tmem101 protein_coding processed_transcript MGP_WSBEiJ_T0032582.1 MGP_WSBEiJ_G0018733.1 mouse_genomes_project 11 118077928 118086829 - Fdxr protein_coding processed_transcript MGP_WSBEiJ_T0032583.1 MGP_WSBEiJ_G0018733.1 mouse_genomes_project 11 118077928 118086965 - MGP_WSBEiJ_P0032583 Fdxr protein_coding protein_coding MGP_WSBEiJ_T0032584.1 MGP_WSBEiJ_G0018733.1 mouse_genomes_project 11 118078252 118078919 - Fdxr protein_coding processed_transcript MGP_WSBEiJ_T0032585.1 MGP_WSBEiJ_G0018733.1 mouse_genomes_project 11 118081741 118086639 - Fdxr protein_coding processed_transcript MGP_WSBEiJ_T0003050.1 MGP_WSBEiJ_G0002841.1 mouse_genomes_project 11 8817907 8819214 - Gm12000 antisense antisense MGP_WSBEiJ_T0012324.1 MGP_WSBEiJ_G0010454.1 mouse_genomes_project 11 44309103 44309445 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030925.1 MGP_WSBEiJ_G0018313.1 mouse_genomes_project 11 95535835 95548028 + MGP_WSBEiJ_P0030925 Ankrd40 protein_coding protein_coding MGP_WSBEiJ_T0030926.1 MGP_WSBEiJ_G0018313.1 mouse_genomes_project 11 95535835 95550365 + MGP_WSBEiJ_P0030926 Ankrd40 protein_coding protein_coding MGP_WSBEiJ_T0030927.1 MGP_WSBEiJ_G0018313.1 mouse_genomes_project 11 95546808 95548667 + Ankrd40 protein_coding retained_intron MGP_WSBEiJ_T0031747.1 MGP_WSBEiJ_G0018553.1 mouse_genomes_project 11 103316263 103328509 - MGP_WSBEiJ_P0031747 Aarsd1 protein_coding protein_coding MGP_WSBEiJ_T0031749.1 MGP_WSBEiJ_G0018553.1 mouse_genomes_project 11 103320200 103328278 - Aarsd1 protein_coding processed_transcript MGP_WSBEiJ_T0031750.1 MGP_WSBEiJ_G0018553.1 mouse_genomes_project 11 103320801 103328276 - Aarsd1 protein_coding retained_intron MGP_WSBEiJ_T0031751.1 MGP_WSBEiJ_G0018553.1 mouse_genomes_project 11 103323072 103323889 - Aarsd1 protein_coding retained_intron MGP_WSBEiJ_T0031752.1 MGP_WSBEiJ_G0018553.1 mouse_genomes_project 11 103327641 103328300 - Aarsd1 protein_coding retained_intron MGP_WSBEiJ_T0006166.1 MGP_WSBEiJ_G0005153.1 mouse_genomes_project 11 64758225 64769290 - Gm12295 lincRNA lincRNA MGP_WSBEiJ_T0006167.1 MGP_WSBEiJ_G0005153.1 mouse_genomes_project 11 64767406 64853372 - Gm12295 lincRNA lincRNA MGP_WSBEiJ_T0016544.1 MGP_WSBEiJ_G0014563.1 mouse_genomes_project 11 114385 126655 + Gm11944 processed_transcript processed_transcript MGP_WSBEiJ_T0031089.1 MGP_WSBEiJ_G0018355.1 mouse_genomes_project 11 97453747 97460490 - MGP_WSBEiJ_P0031089 Atp5g1 protein_coding protein_coding MGP_WSBEiJ_T0031090.1 MGP_WSBEiJ_G0018355.1 mouse_genomes_project 11 97453762 97459857 - MGP_WSBEiJ_P0031090 Atp5g1 protein_coding protein_coding MGP_WSBEiJ_T0031091.1 MGP_WSBEiJ_G0018355.1 mouse_genomes_project 11 97457882 97460401 - MGP_WSBEiJ_P0031091 Atp5g1 protein_coding protein_coding MGP_WSBEiJ_T0031092.1 MGP_WSBEiJ_G0018355.1 mouse_genomes_project 11 97457885 97460439 - MGP_WSBEiJ_P0031092 Atp5g1 protein_coding protein_coding MGP_WSBEiJ_T0003243.1 MGP_WSBEiJ_G0003000.1 mouse_genomes_project 11 108266968 108268055 - Taco1os antisense antisense MGP_WSBEiJ_T0033471.1 MGP_WSBEiJ_G0018903.1 mouse_genomes_project 11 124635256 124645143 + MGP_WSBEiJ_P0033471 Fn3krp protein_coding protein_coding MGP_WSBEiJ_T0033092.1 MGP_WSBEiJ_G0018829.1 mouse_genomes_project 11 122170544 122179196 - MGP_WSBEiJ_P0033092 Cbx4 protein_coding protein_coding MGP_WSBEiJ_T0033093.1 MGP_WSBEiJ_G0018829.1 mouse_genomes_project 11 122174346 122179196 - Cbx4 protein_coding processed_transcript MGP_WSBEiJ_T0030660.1 MGP_WSBEiJ_G0018249.1 mouse_genomes_project 11 87309471 87324303 + MGP_WSBEiJ_P0030660 Rnft1 protein_coding protein_coding MGP_WSBEiJ_T0030661.1 MGP_WSBEiJ_G0018249.1 mouse_genomes_project 11 87309499 87315757 + Rnft1 protein_coding processed_transcript MGP_WSBEiJ_T0030662.1 MGP_WSBEiJ_G0018249.1 mouse_genomes_project 11 87309544 87310920 + Rnft1 protein_coding processed_transcript MGP_WSBEiJ_T0029689.1 MGP_WSBEiJ_G0017995.1 mouse_genomes_project 11 72180337 72184187 - MGP_WSBEiJ_P0029689 Med31 protein_coding protein_coding MGP_WSBEiJ_T0029690.1 MGP_WSBEiJ_G0017995.1 mouse_genomes_project 11 72181830 72183660 - Med31 protein_coding retained_intron MGP_WSBEiJ_T0027796.1 MGP_WSBEiJ_G0017525.1 mouse_genomes_project 11 33724831 33750947 - MGP_WSBEiJ_P0027796 Rars protein_coding protein_coding MGP_WSBEiJ_T0027797.1 MGP_WSBEiJ_G0017525.1 mouse_genomes_project 11 33732118 33736560 - Rars protein_coding processed_transcript MGP_WSBEiJ_T0027798.1 MGP_WSBEiJ_G0017525.1 mouse_genomes_project 11 33733878 33737960 - Rars protein_coding retained_intron MGP_WSBEiJ_T0027799.1 MGP_WSBEiJ_G0017525.1 mouse_genomes_project 11 33737593 33741570 - Rars protein_coding retained_intron MGP_WSBEiJ_T0027800.1 MGP_WSBEiJ_G0017525.1 mouse_genomes_project 11 33742932 33750902 - Rars protein_coding processed_transcript MGP_WSBEiJ_T0097736.1 MGP_WSBEiJ_G0036399.1 mouse_genomes_project 11 103530208 103530376 + Gm26316 snRNA snRNA MGP_WSBEiJ_T0028998.1 MGP_WSBEiJ_G0017847.1 mouse_genomes_project 11 66624659 66650773 + MGP_WSBEiJ_P0028998 Myh3 protein_coding protein_coding MGP_WSBEiJ_T0028999.1 MGP_WSBEiJ_G0017847.1 mouse_genomes_project 11 66624659 66650773 + MGP_WSBEiJ_P0028999 Myh3 protein_coding protein_coding MGP_WSBEiJ_T0029000.1 MGP_WSBEiJ_G0017847.1 mouse_genomes_project 11 66624659 66650768 + MGP_WSBEiJ_P0029000 Myh3 protein_coding protein_coding MGP_WSBEiJ_T0029673.1 MGP_WSBEiJ_G0017991.1 mouse_genomes_project 11 72009812 72103443 - MGP_WSBEiJ_P0029673 Pitpnm3 protein_coding protein_coding MGP_WSBEiJ_T0029674.1 MGP_WSBEiJ_G0017991.1 mouse_genomes_project 11 72009812 72103386 - MGP_WSBEiJ_P0029674 Pitpnm3 protein_coding protein_coding MGP_WSBEiJ_T0029675.1 MGP_WSBEiJ_G0017991.1 mouse_genomes_project 11 72013393 72014334 - Pitpnm3 protein_coding processed_transcript MGP_WSBEiJ_T0029676.1 MGP_WSBEiJ_G0017991.1 mouse_genomes_project 11 72021108 72025025 - Pitpnm3 protein_coding retained_intron MGP_WSBEiJ_T0029677.1 MGP_WSBEiJ_G0017991.1 mouse_genomes_project 11 72031264 72103443 - Pitpnm3 protein_coding retained_intron MGP_WSBEiJ_T0029449.1 MGP_WSBEiJ_G0017947.1 mouse_genomes_project 11 70013815 70018024 - MGP_WSBEiJ_P0029449 Slc16a13 protein_coding protein_coding MGP_WSBEiJ_T0029450.1 MGP_WSBEiJ_G0017947.1 mouse_genomes_project 11 70015764 70017838 - MGP_WSBEiJ_P0029450 Slc16a13 protein_coding protein_coding MGP_WSBEiJ_T0029451.1 MGP_WSBEiJ_G0017947.1 mouse_genomes_project 11 70016202 70018094 - MGP_WSBEiJ_P0029451 Slc16a13 protein_coding protein_coding MGP_WSBEiJ_T0029452.1 MGP_WSBEiJ_G0017947.1 mouse_genomes_project 11 70016315 70017814 - MGP_WSBEiJ_P0029452 Slc16a13 protein_coding protein_coding MGP_WSBEiJ_T0030267.1 MGP_WSBEiJ_G0018143.1 mouse_genomes_project 11 78856347 78857982 + MGP_WSBEiJ_P0030267 Sebox protein_coding protein_coding MGP_WSBEiJ_T0030268.1 MGP_WSBEiJ_G0018143.1 mouse_genomes_project 11 78856399 78857975 + MGP_WSBEiJ_P0030268 Sebox protein_coding protein_coding MGP_WSBEiJ_T0031800.1 MGP_WSBEiJ_G0018563.1 mouse_genomes_project 11 103558040 103561739 + Rdm1 protein_coding processed_transcript MGP_WSBEiJ_T0031801.1 MGP_WSBEiJ_G0018563.1 mouse_genomes_project 11 103558787 103566927 + MGP_WSBEiJ_P0031801 Rdm1 protein_coding protein_coding MGP_WSBEiJ_T0031802.1 MGP_WSBEiJ_G0018563.1 mouse_genomes_project 11 103558817 103564669 + Rdm1 protein_coding processed_transcript MGP_WSBEiJ_T0031803.1 MGP_WSBEiJ_G0018563.1 mouse_genomes_project 11 103559234 103566899 + MGP_WSBEiJ_P0031803 Rdm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031804.1 MGP_WSBEiJ_G0018563.1 mouse_genomes_project 11 103564573 103566787 + Rdm1 protein_coding retained_intron MGP_WSBEiJ_T0012465.1 MGP_WSBEiJ_G0010595.1 mouse_genomes_project 11 103198781 103199420 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030385.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905710 80912578 + Psmd11 protein_coding retained_intron MGP_WSBEiJ_T0030386.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905718 80953048 + MGP_WSBEiJ_P0030386 Psmd11 protein_coding protein_coding MGP_WSBEiJ_T0030387.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905720 80955061 + MGP_WSBEiJ_P0030387 Psmd11 protein_coding protein_coding MGP_WSBEiJ_T0030388.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905739 80953445 + Psmd11 protein_coding retained_intron MGP_WSBEiJ_T0030389.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905741 80924802 + MGP_WSBEiJ_P0030389 Psmd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030390.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905760 80939441 + MGP_WSBEiJ_P0030390 Psmd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030391.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905781 80949701 + MGP_WSBEiJ_P0030391 Psmd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030392.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905781 80952678 + MGP_WSBEiJ_P0030392 Psmd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030393.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905781 80935079 + MGP_WSBEiJ_P0030393 Psmd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030394.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80905785 80935260 + MGP_WSBEiJ_P0030394 Psmd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030395.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80906963 80935264 + MGP_WSBEiJ_P0030395 Psmd11 protein_coding protein_coding MGP_WSBEiJ_T0030396.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80935204 80953014 + MGP_WSBEiJ_P0030396 Psmd11 protein_coding protein_coding MGP_WSBEiJ_T0030397.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80939458 80952853 + MGP_WSBEiJ_P0030397 Psmd11 protein_coding protein_coding MGP_WSBEiJ_T0030398.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80941186 80955061 + MGP_WSBEiJ_P0030398 Psmd11 protein_coding protein_coding MGP_WSBEiJ_T0030399.1 MGP_WSBEiJ_G0018174.1 mouse_genomes_project 11 80941190 80952780 + MGP_WSBEiJ_P0030399 Psmd11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012415.1 MGP_WSBEiJ_G0010545.1 mouse_genomes_project 11 79612057 79612505 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033456.1 MGP_WSBEiJ_G0018899.1 mouse_genomes_project 11 124450626 124472020 + MGP_WSBEiJ_P0033456 Narf protein_coding protein_coding MGP_WSBEiJ_T0033457.1 MGP_WSBEiJ_G0018899.1 mouse_genomes_project 11 124459385 124460296 + Narf protein_coding retained_intron MGP_WSBEiJ_T0033458.1 MGP_WSBEiJ_G0018899.1 mouse_genomes_project 11 124459867 124460658 + Narf protein_coding retained_intron MGP_WSBEiJ_T0028936.1 MGP_WSBEiJ_G0017828.1 mouse_genomes_project 11 62343572 62380954 + MGP_WSBEiJ_P0028936 Cdrt4 protein_coding protein_coding MGP_WSBEiJ_T0027500.1 MGP_WSBEiJ_G0017454.1 mouse_genomes_project 11 20379275 20392583 + MGP_WSBEiJ_P0027500 Fam161a protein_coding protein_coding MGP_WSBEiJ_T0027501.1 MGP_WSBEiJ_G0017454.1 mouse_genomes_project 11 20380091 20396086 + MGP_WSBEiJ_P0027501 Fam161a protein_coding protein_coding MGP_WSBEiJ_T0027502.1 MGP_WSBEiJ_G0017454.1 mouse_genomes_project 11 20380185 20402921 + MGP_WSBEiJ_P0027502 Fam161a protein_coding unknown_likely_coding MGP_WSBEiJ_T0027503.1 MGP_WSBEiJ_G0017454.1 mouse_genomes_project 11 20380209 20396103 + MGP_WSBEiJ_P0027503 Fam161a protein_coding protein_coding MGP_WSBEiJ_T0027504.1 MGP_WSBEiJ_G0017454.1 mouse_genomes_project 11 20385255 20396093 + MGP_WSBEiJ_P0027504 Fam161a protein_coding protein_coding MGP_WSBEiJ_T0027505.1 MGP_WSBEiJ_G0017454.1 mouse_genomes_project 11 20392816 20402920 + MGP_WSBEiJ_P0027505 Fam161a protein_coding protein_coding MGP_WSBEiJ_T0027506.1 MGP_WSBEiJ_G0017454.1 mouse_genomes_project 11 20392902 20396092 + MGP_WSBEiJ_P0027506 Fam161a protein_coding protein_coding MGP_WSBEiJ_T0100480.1 MGP_WSBEiJ_G0038939.1 mouse_genomes_project 11 73962206 73962247 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0031063.1 MGP_WSBEiJ_G0018348.1 mouse_genomes_project 11 97201583 97214825 - MGP_WSBEiJ_P0031063 Abi3 protein_coding protein_coding MGP_WSBEiJ_T0031065.1 MGP_WSBEiJ_G0018348.1 mouse_genomes_project 11 97204360 97214892 - Abi3 protein_coding processed_transcript MGP_WSBEiJ_T0031066.1 MGP_WSBEiJ_G0018348.1 mouse_genomes_project 11 97205140 97208294 - MGP_WSBEiJ_P0031066 Abi3 protein_coding protein_coding MGP_WSBEiJ_T0031067.1 MGP_WSBEiJ_G0018348.1 mouse_genomes_project 11 97209478 97214514 - Abi3 protein_coding processed_transcript MGP_WSBEiJ_T0032822.1 MGP_WSBEiJ_G0018774.1 mouse_genomes_project 11 119060459 119075621 - Acox1 protein_coding processed_transcript MGP_WSBEiJ_T0032823.1 MGP_WSBEiJ_G0018774.1 mouse_genomes_project 11 119060459 119094482 - MGP_WSBEiJ_P0032823 Acox1 protein_coding protein_coding MGP_WSBEiJ_T0032824.1 MGP_WSBEiJ_G0018774.1 mouse_genomes_project 11 119060459 119082938 - MGP_WSBEiJ_P0032824 Acox1 protein_coding protein_coding MGP_WSBEiJ_T0032825.1 MGP_WSBEiJ_G0018774.1 mouse_genomes_project 11 119060459 119094726 - MGP_WSBEiJ_P0032825 Acox1 protein_coding protein_coding MGP_WSBEiJ_T0032826.1 MGP_WSBEiJ_G0018774.1 mouse_genomes_project 11 119063914 119072986 - Acox1 protein_coding processed_transcript MGP_WSBEiJ_T0032827.1 MGP_WSBEiJ_G0018774.1 mouse_genomes_project 11 119071447 119075771 - Acox1 protein_coding processed_transcript MGP_WSBEiJ_T0032828.1 MGP_WSBEiJ_G0018774.1 mouse_genomes_project 11 119082391 119094410 - Acox1 protein_coding processed_transcript MGP_WSBEiJ_T0027871.1 MGP_WSBEiJ_G0017544.1 mouse_genomes_project 11 41837798 41864502 + MGP_WSBEiJ_P0027871 Pwwp2a protein_coding protein_coding MGP_WSBEiJ_T0027872.1 MGP_WSBEiJ_G0017544.1 mouse_genomes_project 11 41837858 41878754 + MGP_WSBEiJ_P0027872 Pwwp2a protein_coding protein_coding MGP_WSBEiJ_T0027873.1 MGP_WSBEiJ_G0017544.1 mouse_genomes_project 11 41838348 41839897 + Pwwp2a protein_coding processed_transcript MGP_WSBEiJ_T0027874.1 MGP_WSBEiJ_G0017544.1 mouse_genomes_project 11 41839985 41864502 + MGP_WSBEiJ_P0027874 Pwwp2a protein_coding protein_coding MGP_WSBEiJ_T0027875.1 MGP_WSBEiJ_G0017544.1 mouse_genomes_project 11 41862507 41879828 + Pwwp2a protein_coding processed_transcript MGP_WSBEiJ_T0027876.1 MGP_WSBEiJ_G0017544.1 mouse_genomes_project 11 41875999 41879173 + Pwwp2a protein_coding processed_transcript MGP_WSBEiJ_T0000817.1 MGP_WSBEiJ_G0000756.1 mouse_genomes_project 11 43432198 43432501 - TEC TEC MGP_WSBEiJ_T0028540.1 MGP_WSBEiJ_G0017745.1 mouse_genomes_project 11 58086707 58088854 + MGP_WSBEiJ_P0028540 Hist3h2a protein_coding protein_coding MGP_WSBEiJ_T0030519.1 MGP_WSBEiJ_G0018217.1 mouse_genomes_project 11 84345268 84347368 + MGP_WSBEiJ_P0030519 Ccl4 protein_coding protein_coding MGP_WSBEiJ_T0030663.1 MGP_WSBEiJ_G0018250.1 mouse_genomes_project 11 87324148 87372662 - MGP_WSBEiJ_P0030663 Rps6kb1 protein_coding protein_coding MGP_WSBEiJ_T0030664.1 MGP_WSBEiJ_G0018250.1 mouse_genomes_project 11 87327304 87372662 - Rps6kb1 protein_coding retained_intron MGP_WSBEiJ_T0030665.1 MGP_WSBEiJ_G0018250.1 mouse_genomes_project 11 87327870 87336896 - Rps6kb1 protein_coding processed_transcript MGP_WSBEiJ_T0030666.1 MGP_WSBEiJ_G0018250.1 mouse_genomes_project 11 87338869 87345291 - Rps6kb1 protein_coding processed_transcript MGP_WSBEiJ_T0030667.1 MGP_WSBEiJ_G0018250.1 mouse_genomes_project 11 87339234 87372631 - MGP_WSBEiJ_P0030667 Rps6kb1 protein_coding protein_coding MGP_WSBEiJ_T0030668.1 MGP_WSBEiJ_G0018250.1 mouse_genomes_project 11 87344895 87360139 - Rps6kb1 protein_coding retained_intron MGP_WSBEiJ_T0030669.1 MGP_WSBEiJ_G0018250.1 mouse_genomes_project 11 87360070 87372622 - MGP_WSBEiJ_P0030669 Rps6kb1 protein_coding protein_coding MGP_WSBEiJ_T0031088.1 MGP_WSBEiJ_G0018354.1 mouse_genomes_project 11 97432708 97450283 - MGP_WSBEiJ_P0031088 Ube2z protein_coding protein_coding MGP_WSBEiJ_T0030718.1 MGP_WSBEiJ_G0018265.1 mouse_genomes_project 11 88433842 88436440 + MGP_WSBEiJ_P0030718 Gm11492 protein_coding protein_coding MGP_WSBEiJ_T0098937.1 MGP_WSBEiJ_G0037600.1 mouse_genomes_project 11 77493456 77493544 - Gm24989 snoRNA snoRNA MGP_WSBEiJ_T0003077.1 MGP_WSBEiJ_G0002864.1 mouse_genomes_project 11 44426507 44429830 - Gm16033 antisense antisense MGP_WSBEiJ_T0030475.1 MGP_WSBEiJ_G0018203.1 mouse_genomes_project 11 83936020 83952985 - MGP_WSBEiJ_P0030475 Slfn14 protein_coding protein_coding MGP_WSBEiJ_T0029167.1 MGP_WSBEiJ_G0017886.1 mouse_genomes_project 11 68882456 68904726 - MGP_WSBEiJ_P0029167 protein_coding protein_coding MGP_WSBEiJ_T0003092.1 MGP_WSBEiJ_G0002879.1 mouse_genomes_project 11 53149133 53163098 - Gm12224 antisense antisense MGP_WSBEiJ_T0003093.1 MGP_WSBEiJ_G0002879.1 mouse_genomes_project 11 53154306 53163049 - Gm12224 antisense antisense MGP_WSBEiJ_T0003288.1 MGP_WSBEiJ_G0003036.1 mouse_genomes_project 11 123667753 123670745 - Gm11788 antisense antisense MGP_WSBEiJ_T0028075.1 MGP_WSBEiJ_G0017608.1 mouse_genomes_project 11 48702324 48706229 + 3010026O09Rik protein_coding processed_transcript MGP_WSBEiJ_T0028076.1 MGP_WSBEiJ_G0017608.1 mouse_genomes_project 11 48702729 48729715 + MGP_WSBEiJ_P0028076 3010026O09Rik protein_coding protein_coding MGP_WSBEiJ_T0028077.1 MGP_WSBEiJ_G0017608.1 mouse_genomes_project 11 48702787 48726385 + MGP_WSBEiJ_P0028077 3010026O09Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027754.1 MGP_WSBEiJ_G0017510.1 mouse_genomes_project 11 31001605 31004452 - MGP_WSBEiJ_P0027754 Tlx3 protein_coding protein_coding MGP_WSBEiJ_T0003210.1 MGP_WSBEiJ_G0002973.1 mouse_genomes_project 11 100027827 100028837 + Gm12352 antisense antisense MGP_WSBEiJ_T0027179.1 MGP_WSBEiJ_G0017376.1 mouse_genomes_project 11 2749704 2761644 + MGP_WSBEiJ_P0027179 Dbnl protein_coding protein_coding MGP_WSBEiJ_T0027180.1 MGP_WSBEiJ_G0017376.1 mouse_genomes_project 11 2749738 2761302 + MGP_WSBEiJ_P0027180 Dbnl protein_coding protein_coding MGP_WSBEiJ_T0027181.1 MGP_WSBEiJ_G0017376.1 mouse_genomes_project 11 2749746 2761977 + MGP_WSBEiJ_P0027181 Dbnl protein_coding protein_coding MGP_WSBEiJ_T0003208.1 MGP_WSBEiJ_G0002971.1 mouse_genomes_project 11 99066078 99075576 + antisense antisense MGP_WSBEiJ_T0003242.1 MGP_WSBEiJ_G0002999.1 mouse_genomes_project 11 108251363 108252065 - Gm11646 antisense antisense MGP_WSBEiJ_T0031018.1 MGP_WSBEiJ_G0018335.1 mouse_genomes_project 11 96452318 96457489 + MGP_WSBEiJ_P0031018 Dlx3 protein_coding protein_coding MGP_WSBEiJ_T0027040.1 MGP_WSBEiJ_G0017346.1 mouse_genomes_project 11 1009741 1016300 - Ccdc157 protein_coding processed_transcript MGP_WSBEiJ_T0027041.1 MGP_WSBEiJ_G0017346.1 mouse_genomes_project 11 1009741 1030236 - MGP_WSBEiJ_P0027041 Ccdc157 protein_coding protein_coding MGP_WSBEiJ_T0027042.1 MGP_WSBEiJ_G0017346.1 mouse_genomes_project 11 1009741 1030238 - MGP_WSBEiJ_P0027042 Ccdc157 protein_coding protein_coding MGP_WSBEiJ_T0027043.1 MGP_WSBEiJ_G0017346.1 mouse_genomes_project 11 1017448 1030163 - Ccdc157 protein_coding processed_transcript MGP_WSBEiJ_T0027044.1 MGP_WSBEiJ_G0017346.1 mouse_genomes_project 11 1019942 1030163 - Ccdc157 protein_coding processed_transcript MGP_WSBEiJ_T0027045.1 MGP_WSBEiJ_G0017346.1 mouse_genomes_project 11 1021425 1030197 - Ccdc157 protein_coding processed_transcript MGP_WSBEiJ_T0009595.1 MGP_WSBEiJ_G0007752.1 mouse_genomes_project 11 99805995 99806073 + Gm27399 miRNA miRNA MGP_WSBEiJ_T0011110.1 MGP_WSBEiJ_G0009267.1 mouse_genomes_project 11 72792485 72792677 - Gm22075 misc_RNA misc_RNA MGP_WSBEiJ_T0012289.1 MGP_WSBEiJ_G0010419.1 mouse_genomes_project 11 28215165 28216124 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097193.1 MGP_WSBEiJ_G0035874.1 mouse_genomes_project 11 119052516 119052642 - Gm26413 scaRNA scaRNA MGP_WSBEiJ_T0027009.1 MGP_WSBEiJ_G0017339.1 mouse_genomes_project 11 829816 845582 + MGP_WSBEiJ_P0027009 Pes1 protein_coding protein_coding MGP_WSBEiJ_T0027010.1 MGP_WSBEiJ_G0017339.1 mouse_genomes_project 11 829850 836603 + Pes1 protein_coding processed_transcript MGP_WSBEiJ_T0027011.1 MGP_WSBEiJ_G0017339.1 mouse_genomes_project 11 829890 842652 + Pes1 protein_coding processed_transcript MGP_WSBEiJ_T0012326.1 MGP_WSBEiJ_G0010456.1 mouse_genomes_project 11 45176634 45176979 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032927.1 MGP_WSBEiJ_G0018795.1 mouse_genomes_project 11 119773768 119779627 - Jmjd6 protein_coding retained_intron MGP_WSBEiJ_T0032928.1 MGP_WSBEiJ_G0018795.1 mouse_genomes_project 11 119773768 119779795 - MGP_WSBEiJ_P0032928 Jmjd6 protein_coding protein_coding MGP_WSBEiJ_T0032929.1 MGP_WSBEiJ_G0018795.1 mouse_genomes_project 11 119773769 119779636 - Jmjd6 protein_coding retained_intron MGP_WSBEiJ_T0032930.1 MGP_WSBEiJ_G0018795.1 mouse_genomes_project 11 119773769 119779701 - MGP_WSBEiJ_P0032930 Jmjd6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032931.1 MGP_WSBEiJ_G0018795.1 mouse_genomes_project 11 119773771 119777582 - MGP_WSBEiJ_P0032931 Jmjd6 protein_coding protein_coding MGP_WSBEiJ_T0032932.1 MGP_WSBEiJ_G0018795.1 mouse_genomes_project 11 119773924 119779051 - MGP_WSBEiJ_P0032932 Jmjd6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032933.1 MGP_WSBEiJ_G0018795.1 mouse_genomes_project 11 119773949 119779066 - MGP_WSBEiJ_P0032933 Jmjd6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031076.1 MGP_WSBEiJ_G0018351.1 mouse_genomes_project 11 97333358 97384820 - MGP_WSBEiJ_P0031076 Igf2bp1 protein_coding protein_coding MGP_WSBEiJ_T0031077.1 MGP_WSBEiJ_G0018351.1 mouse_genomes_project 11 97339631 97344073 - Igf2bp1 protein_coding processed_transcript MGP_WSBEiJ_T0031078.1 MGP_WSBEiJ_G0018351.1 mouse_genomes_project 11 97349205 97358659 - Igf2bp1 protein_coding processed_transcript MGP_WSBEiJ_T0031079.1 MGP_WSBEiJ_G0018351.1 mouse_genomes_project 11 97350040 97358676 - Igf2bp1 protein_coding processed_transcript MGP_WSBEiJ_T0031080.1 MGP_WSBEiJ_G0018351.1 mouse_genomes_project 11 97354460 97358673 - Igf2bp1 protein_coding processed_transcript MGP_WSBEiJ_T0012406.1 MGP_WSBEiJ_G0010536.1 mouse_genomes_project 11 75574354 75574754 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006140.1 MGP_WSBEiJ_G0005129.1 mouse_genomes_project 11 44728380 44735267 - lincRNA lincRNA MGP_WSBEiJ_T0006079.1 MGP_WSBEiJ_G0005075.1 mouse_genomes_project 11 1147680 1155622 + Gm11959 lincRNA lincRNA MGP_WSBEiJ_T0029290.1 MGP_WSBEiJ_G0017915.1 mouse_genomes_project 11 69535582 69549826 + MGP_WSBEiJ_P0029290 Zbtb4 protein_coding protein_coding MGP_WSBEiJ_T0029291.1 MGP_WSBEiJ_G0017915.1 mouse_genomes_project 11 69535582 69553641 + MGP_WSBEiJ_P0029291 Zbtb4 protein_coding protein_coding MGP_WSBEiJ_T0029292.1 MGP_WSBEiJ_G0017915.1 mouse_genomes_project 11 69535654 69551566 + MGP_WSBEiJ_P0029292 Zbtb4 protein_coding protein_coding MGP_WSBEiJ_T0029293.1 MGP_WSBEiJ_G0017915.1 mouse_genomes_project 11 69535676 69547926 + MGP_WSBEiJ_P0029293 Zbtb4 protein_coding protein_coding MGP_WSBEiJ_T0029294.1 MGP_WSBEiJ_G0017915.1 mouse_genomes_project 11 69536109 69545655 + MGP_WSBEiJ_P0029294 Zbtb4 protein_coding protein_coding MGP_WSBEiJ_T0029295.1 MGP_WSBEiJ_G0017915.1 mouse_genomes_project 11 69536204 69545639 + MGP_WSBEiJ_P0029295 Zbtb4 protein_coding protein_coding MGP_WSBEiJ_T0029296.1 MGP_WSBEiJ_G0017915.1 mouse_genomes_project 11 69545022 69549290 + MGP_WSBEiJ_P0029296 Zbtb4 protein_coding protein_coding MGP_WSBEiJ_T0012434.1 MGP_WSBEiJ_G0010564.1 mouse_genomes_project 11 88147458 88147730 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032161.1 MGP_WSBEiJ_G0018634.1 mouse_genomes_project 11 106827606 106906984 + MGP_WSBEiJ_P0032161 protein_coding protein_coding MGP_WSBEiJ_T0032162.1 MGP_WSBEiJ_G0018634.1 mouse_genomes_project 11 106852570 106872692 + protein_coding processed_transcript MGP_WSBEiJ_T0012268.1 MGP_WSBEiJ_G0010398.1 mouse_genomes_project 11 20147574 20148011 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031355.1 MGP_WSBEiJ_G0018421.1 mouse_genomes_project 11 100058309 100155746 - MGP_WSBEiJ_P0031355 Ikzf3 protein_coding protein_coding MGP_WSBEiJ_T0031356.1 MGP_WSBEiJ_G0018421.1 mouse_genomes_project 11 100060665 100076406 - Ikzf3 protein_coding processed_transcript MGP_WSBEiJ_T0031357.1 MGP_WSBEiJ_G0018421.1 mouse_genomes_project 11 100083212 100088972 - Ikzf3 protein_coding processed_transcript MGP_WSBEiJ_T0031358.1 MGP_WSBEiJ_G0018421.1 mouse_genomes_project 11 100117964 100155977 - Ikzf3 protein_coding retained_intron MGP_WSBEiJ_T0016641.1 MGP_WSBEiJ_G0014613.1 mouse_genomes_project 11 97866909 97883029 - Gm11529 processed_transcript processed_transcript MGP_WSBEiJ_T0031061.1 MGP_WSBEiJ_G0018347.1 mouse_genomes_project 11 97196381 97202211 + MGP_WSBEiJ_P0031061 Phospho1 protein_coding protein_coding MGP_WSBEiJ_T0031062.1 MGP_WSBEiJ_G0018347.1 mouse_genomes_project 11 97196382 97204558 + MGP_WSBEiJ_P0031062 Phospho1 protein_coding protein_coding MGP_WSBEiJ_T0031064.1 MGP_WSBEiJ_G0018347.1 mouse_genomes_project 11 97202272 97203102 + MGP_WSBEiJ_P0031064 Phospho1 protein_coding protein_coding MGP_WSBEiJ_T0100475.1 MGP_WSBEiJ_G0038934.1 mouse_genomes_project 11 58797090 58797465 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098902.1 MGP_WSBEiJ_G0037565.1 mouse_genomes_project 11 18134853 18134982 - Gm22807 snoRNA snoRNA MGP_WSBEiJ_T0029097.1 MGP_WSBEiJ_G0017872.1 mouse_genomes_project 11 68640784 68646885 + MGP_WSBEiJ_P0029097 Slc25a35 protein_coding protein_coding MGP_WSBEiJ_T0029098.1 MGP_WSBEiJ_G0017872.1 mouse_genomes_project 11 68640800 68646151 + Slc25a35 protein_coding processed_transcript MGP_WSBEiJ_T0029099.1 MGP_WSBEiJ_G0017872.1 mouse_genomes_project 11 68640801 68648933 + MGP_WSBEiJ_P0029099 Slc25a35 protein_coding protein_coding MGP_WSBEiJ_T0012493.1 MGP_WSBEiJ_G0010623.1 mouse_genomes_project 11 114598110 114598887 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003061.1 MGP_WSBEiJ_G0002849.1 mouse_genomes_project 11 21522846 21541459 - Gm12064 antisense antisense MGP_WSBEiJ_T0006101.1 MGP_WSBEiJ_G0005096.1 mouse_genomes_project 11 21631025 21635769 - Gm12065 lincRNA lincRNA MGP_WSBEiJ_T0097744.1 MGP_WSBEiJ_G0036407.1 mouse_genomes_project 11 111905992 111906103 - Gm22378 snRNA snRNA MGP_WSBEiJ_T0028921.1 MGP_WSBEiJ_G0017825.1 mouse_genomes_project 11 62208248 62232030 + MGP_WSBEiJ_P0028921 Trim16 protein_coding protein_coding MGP_WSBEiJ_T0028922.1 MGP_WSBEiJ_G0017825.1 mouse_genomes_project 11 62208270 62240662 + MGP_WSBEiJ_P0028922 Trim16 protein_coding protein_coding MGP_WSBEiJ_T0028923.1 MGP_WSBEiJ_G0017825.1 mouse_genomes_project 11 62208457 62209266 + Trim16 protein_coding processed_transcript MGP_WSBEiJ_T0028924.1 MGP_WSBEiJ_G0017825.1 mouse_genomes_project 11 62208486 62232030 + MGP_WSBEiJ_P0028924 Trim16 protein_coding protein_coding MGP_WSBEiJ_T0028925.1 MGP_WSBEiJ_G0017825.1 mouse_genomes_project 11 62222881 62230551 + Trim16 protein_coding processed_transcript MGP_WSBEiJ_T0027537.1 MGP_WSBEiJ_G0017460.1 mouse_genomes_project 11 21056834 21076973 - MGP_WSBEiJ_P0027537 Pex13 protein_coding protein_coding MGP_WSBEiJ_T0027538.1 MGP_WSBEiJ_G0017460.1 mouse_genomes_project 11 21059811 21076866 - MGP_WSBEiJ_P0027538 Pex13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027539.1 MGP_WSBEiJ_G0017460.1 mouse_genomes_project 11 21066178 21076856 - Pex13 protein_coding processed_transcript MGP_WSBEiJ_T0027540.1 MGP_WSBEiJ_G0017460.1 mouse_genomes_project 11 21066431 21076687 - Pex13 protein_coding processed_transcript MGP_WSBEiJ_T0028041.1 MGP_WSBEiJ_G0017601.1 mouse_genomes_project 11 48171347 48172856 + MGP_WSBEiJ_P0028041 Scgb3a1 protein_coding protein_coding MGP_WSBEiJ_T0028042.1 MGP_WSBEiJ_G0017601.1 mouse_genomes_project 11 48171347 48172856 + MGP_WSBEiJ_P0028042 Scgb3a1 protein_coding protein_coding MGP_WSBEiJ_T0003282.1 MGP_WSBEiJ_G0003030.1 mouse_genomes_project 11 121169725 121173150 + Gm11738 antisense antisense MGP_WSBEiJ_T0030429.1 MGP_WSBEiJ_G0018190.1 mouse_genomes_project 11 83380351 83381942 + MGP_WSBEiJ_P0030429 Zfp830 protein_coding protein_coding MGP_WSBEiJ_T0027664.1 MGP_WSBEiJ_G0017486.1 mouse_genomes_project 11 28591654 28601316 + MGP_WSBEiJ_P0027664 Gpr75 protein_coding protein_coding MGP_WSBEiJ_T0006120.1 MGP_WSBEiJ_G0005110.1 mouse_genomes_project 11 29818145 29824096 - Gm12108 lincRNA lincRNA MGP_WSBEiJ_T0028331.1 MGP_WSBEiJ_G0017672.1 mouse_genomes_project 11 52761267 52761702 - MGP_WSBEiJ_P0028331 protein_coding protein_coding MGP_WSBEiJ_T0033261.1 MGP_WSBEiJ_G0018859.1 mouse_genomes_project 11 123643650 123651277 + Hgs protein_coding processed_transcript MGP_WSBEiJ_T0033262.1 MGP_WSBEiJ_G0018859.1 mouse_genomes_project 11 123643650 123654099 + MGP_WSBEiJ_P0033262 Hgs protein_coding protein_coding MGP_WSBEiJ_T0033263.1 MGP_WSBEiJ_G0018859.1 mouse_genomes_project 11 123643650 123662302 + MGP_WSBEiJ_P0033263 Hgs protein_coding protein_coding MGP_WSBEiJ_T0033264.1 MGP_WSBEiJ_G0018859.1 mouse_genomes_project 11 123643650 123662297 + MGP_WSBEiJ_P0033264 Hgs protein_coding protein_coding MGP_WSBEiJ_T0033265.1 MGP_WSBEiJ_G0018859.1 mouse_genomes_project 11 123643650 123662297 + MGP_WSBEiJ_P0033265 Hgs protein_coding protein_coding MGP_WSBEiJ_T0033266.1 MGP_WSBEiJ_G0018859.1 mouse_genomes_project 11 123654281 123656955 + MGP_WSBEiJ_P0033266 Hgs protein_coding protein_coding MGP_WSBEiJ_T0012470.1 MGP_WSBEiJ_G0010600.1 mouse_genomes_project 11 104565657 104565978 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100493.1 MGP_WSBEiJ_G0038952.1 mouse_genomes_project 11 95999577 96000358 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0029810.1 MGP_WSBEiJ_G0018036.1 mouse_genomes_project 11 73898022 73975756 - MGP_WSBEiJ_P0029810 Olfr392 protein_coding protein_coding MGP_WSBEiJ_T0029811.1 MGP_WSBEiJ_G0018036.1 mouse_genomes_project 11 73898636 73975753 - MGP_WSBEiJ_P0029811 Olfr392 protein_coding protein_coding MGP_WSBEiJ_T0012353.1 MGP_WSBEiJ_G0010483.1 mouse_genomes_project 11 56383717 56386028 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032083.1 MGP_WSBEiJ_G0018615.1 mouse_genomes_project 11 105286384 105338608 - MGP_WSBEiJ_P0032083 Map3k14 protein_coding protein_coding MGP_WSBEiJ_T0032084.1 MGP_WSBEiJ_G0018615.1 mouse_genomes_project 11 105287427 105288477 - Map3k14 protein_coding processed_transcript MGP_WSBEiJ_T0032085.1 MGP_WSBEiJ_G0018615.1 mouse_genomes_project 11 105307575 105312805 - Map3k14 protein_coding processed_transcript MGP_WSBEiJ_T0032086.1 MGP_WSBEiJ_G0018615.1 mouse_genomes_project 11 105309875 105310676 - Map3k14 protein_coding processed_transcript MGP_WSBEiJ_T0003129.1 MGP_WSBEiJ_G0002910.1 mouse_genomes_project 11 62378312 62391978 - Cdrt4os1 antisense antisense MGP_WSBEiJ_T0003130.1 MGP_WSBEiJ_G0002910.1 mouse_genomes_project 11 62386974 62391984 - Cdrt4os1 antisense antisense MGP_WSBEiJ_T0011598.1 MGP_WSBEiJ_G0009753.1 mouse_genomes_project 11 73816576 73817599 - MGP_WSBEiJ_P0011598 Olfr388-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0006128.1 MGP_WSBEiJ_G0005118.1 mouse_genomes_project 11 36513009 36540221 - Gm12130 lincRNA lincRNA MGP_WSBEiJ_T0027290.1 MGP_WSBEiJ_G0017402.1 mouse_genomes_project 11 4090178 4209715 + MGP_WSBEiJ_P0027290 Adcy1 protein_coding protein_coding MGP_WSBEiJ_T0027291.1 MGP_WSBEiJ_G0017402.1 mouse_genomes_project 11 4191057 4204090 + Adcy1 protein_coding processed_transcript MGP_WSBEiJ_T0032978.1 MGP_WSBEiJ_G0018802.1 mouse_genomes_project 11 120500236 120504904 + MGP_WSBEiJ_P0032978 Gm11733 protein_coding protein_coding MGP_WSBEiJ_T0098908.1 MGP_WSBEiJ_G0037571.1 mouse_genomes_project 11 24606349 24606468 - Gm24850 snoRNA snoRNA MGP_WSBEiJ_T0028853.1 MGP_WSBEiJ_G0017812.1 mouse_genomes_project 11 61575124 61593325 + MGP_WSBEiJ_P0028853 Adora2b protein_coding protein_coding MGP_WSBEiJ_T0029795.1 MGP_WSBEiJ_G0018025.1 mouse_genomes_project 11 73442169 73446574 - MGP_WSBEiJ_P0029795 Olfr1 protein_coding protein_coding MGP_WSBEiJ_T0029796.1 MGP_WSBEiJ_G0018025.1 mouse_genomes_project 11 73442525 73446574 - MGP_WSBEiJ_P0029796 Olfr1 protein_coding protein_coding MGP_WSBEiJ_T0033459.1 MGP_WSBEiJ_G0018900.1 mouse_genomes_project 11 124476153 124529855 + MGP_WSBEiJ_P0033459 Foxk2 protein_coding protein_coding MGP_WSBEiJ_T0033460.1 MGP_WSBEiJ_G0018900.1 mouse_genomes_project 11 124506919 124514363 + Foxk2 protein_coding processed_transcript MGP_WSBEiJ_T0033461.1 MGP_WSBEiJ_G0018900.1 mouse_genomes_project 11 124516882 124518213 + Foxk2 protein_coding retained_intron MGP_WSBEiJ_T0006197.1 MGP_WSBEiJ_G0005175.1 mouse_genomes_project 11 80463129 80468304 - Gm26563 lincRNA lincRNA MGP_WSBEiJ_T0006198.1 MGP_WSBEiJ_G0005175.1 mouse_genomes_project 11 80464255 80476601 - Gm26563 lincRNA lincRNA MGP_WSBEiJ_T0097717.1 MGP_WSBEiJ_G0036380.1 mouse_genomes_project 11 83932432 83932623 + Gm23444 snRNA snRNA MGP_WSBEiJ_T0029240.1 MGP_WSBEiJ_G0017904.1 mouse_genomes_project 11 69388685 69412596 + MGP_WSBEiJ_P0029240 Fxr2 protein_coding protein_coding MGP_WSBEiJ_T0029241.1 MGP_WSBEiJ_G0017904.1 mouse_genomes_project 11 69395824 69397081 + Fxr2 protein_coding processed_transcript MGP_WSBEiJ_T0029242.1 MGP_WSBEiJ_G0017904.1 mouse_genomes_project 11 69399207 69409095 + Fxr2 protein_coding processed_transcript MGP_WSBEiJ_T0029243.1 MGP_WSBEiJ_G0017904.1 mouse_genomes_project 11 69408898 69410375 + Fxr2 protein_coding processed_transcript MGP_WSBEiJ_T0029244.1 MGP_WSBEiJ_G0017904.1 mouse_genomes_project 11 69410422 69411016 + Fxr2 protein_coding processed_transcript MGP_WSBEiJ_T0029245.1 MGP_WSBEiJ_G0017904.1 mouse_genomes_project 11 69411618 69412222 + Fxr2 protein_coding processed_transcript MGP_WSBEiJ_T0028767.1 MGP_WSBEiJ_G0017799.1 mouse_genomes_project 11 60626179 60664024 - MGP_WSBEiJ_P0028767 Slc47a1 protein_coding protein_coding MGP_WSBEiJ_T0028768.1 MGP_WSBEiJ_G0017799.1 mouse_genomes_project 11 60626180 60664007 - MGP_WSBEiJ_P0028768 Slc47a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028769.1 MGP_WSBEiJ_G0017799.1 mouse_genomes_project 11 60648648 60651659 - Slc47a1 protein_coding processed_transcript MGP_WSBEiJ_T0028770.1 MGP_WSBEiJ_G0017799.1 mouse_genomes_project 11 60648825 60664288 - MGP_WSBEiJ_P0028770 Slc47a1 protein_coding protein_coding MGP_WSBEiJ_T0028959.1 MGP_WSBEiJ_G0017837.1 mouse_genomes_project 11 64630170 64638293 - MGP_WSBEiJ_P0028959 1700086D15Rik protein_coding protein_coding MGP_WSBEiJ_T0028960.1 MGP_WSBEiJ_G0017837.1 mouse_genomes_project 11 64630170 64638292 - MGP_WSBEiJ_P0028960 1700086D15Rik protein_coding protein_coding MGP_WSBEiJ_T0029080.1 MGP_WSBEiJ_G0017868.1 mouse_genomes_project 11 68547732 68554951 + MGP_WSBEiJ_P0029080 Rnf222 protein_coding protein_coding MGP_WSBEiJ_T0012496.1 MGP_WSBEiJ_G0010626.1 mouse_genomes_project 11 117087177 117088310 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031261.1 MGP_WSBEiJ_G0018400.1 mouse_genomes_project 11 99294064 99300268 - MGP_WSBEiJ_P0031261 Rpl23 protein_coding protein_coding MGP_WSBEiJ_T0031262.1 MGP_WSBEiJ_G0018400.1 mouse_genomes_project 11 99294576 99300107 - Rpl23 protein_coding processed_transcript MGP_WSBEiJ_T0031263.1 MGP_WSBEiJ_G0018400.1 mouse_genomes_project 11 99294594 99295310 - Rpl23 protein_coding processed_transcript MGP_WSBEiJ_T0031264.1 MGP_WSBEiJ_G0018400.1 mouse_genomes_project 11 99299192 99300193 - Rpl23 protein_coding processed_transcript MGP_WSBEiJ_T0031265.1 MGP_WSBEiJ_G0018400.1 mouse_genomes_project 11 99299234 99300213 - MGP_WSBEiJ_P0031265 Rpl23 protein_coding protein_coding MGP_WSBEiJ_T0028887.1 MGP_WSBEiJ_G0017817.1 mouse_genomes_project 11 61883037 61897417 - MGP_WSBEiJ_P0028887 Cenpv protein_coding protein_coding MGP_WSBEiJ_T0028888.1 MGP_WSBEiJ_G0017817.1 mouse_genomes_project 11 61883040 61885994 - Cenpv protein_coding retained_intron MGP_WSBEiJ_T0028889.1 MGP_WSBEiJ_G0017817.1 mouse_genomes_project 11 61883234 61896641 - Cenpv protein_coding processed_transcript MGP_WSBEiJ_T0028890.1 MGP_WSBEiJ_G0017817.1 mouse_genomes_project 11 61885590 61896785 - Cenpv protein_coding processed_transcript MGP_WSBEiJ_T0028891.1 MGP_WSBEiJ_G0017817.1 mouse_genomes_project 11 61892037 61897159 - MGP_WSBEiJ_P0028891 Cenpv protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028892.1 MGP_WSBEiJ_G0017817.1 mouse_genomes_project 11 61892268 61897159 - Cenpv protein_coding processed_transcript MGP_WSBEiJ_T0097733.1 MGP_WSBEiJ_G0036396.1 mouse_genomes_project 11 100556486 100556590 - Gm23640 snRNA snRNA MGP_WSBEiJ_T0027337.1 MGP_WSBEiJ_G0017416.1 mouse_genomes_project 11 8913583 8935989 - Fignl1 protein_coding processed_transcript MGP_WSBEiJ_T0027338.1 MGP_WSBEiJ_G0017416.1 mouse_genomes_project 11 8913595 8928524 - Fignl1 protein_coding processed_transcript MGP_WSBEiJ_T0027339.1 MGP_WSBEiJ_G0017416.1 mouse_genomes_project 11 8927350 8936026 - MGP_WSBEiJ_P0027339 Fignl1 protein_coding protein_coding MGP_WSBEiJ_T0027340.1 MGP_WSBEiJ_G0017416.1 mouse_genomes_project 11 8927350 8936026 - MGP_WSBEiJ_P0027340 Fignl1 protein_coding protein_coding MGP_WSBEiJ_T0027341.1 MGP_WSBEiJ_G0017416.1 mouse_genomes_project 11 8927350 8936023 - MGP_WSBEiJ_P0027341 Fignl1 protein_coding protein_coding MGP_WSBEiJ_T0027342.1 MGP_WSBEiJ_G0017416.1 mouse_genomes_project 11 8927614 8935996 - MGP_WSBEiJ_P0027342 Fignl1 protein_coding protein_coding MGP_WSBEiJ_T0027343.1 MGP_WSBEiJ_G0017416.1 mouse_genomes_project 11 8929759 8936012 - MGP_WSBEiJ_P0027343 Fignl1 protein_coding protein_coding MGP_WSBEiJ_T0033290.1 MGP_WSBEiJ_G0018868.1 mouse_genomes_project 11 123781877 123791467 + MGP_WSBEiJ_P0033290 Anapc11 protein_coding protein_coding MGP_WSBEiJ_T0033291.1 MGP_WSBEiJ_G0018868.1 mouse_genomes_project 11 123781896 123784145 + Anapc11 protein_coding retained_intron MGP_WSBEiJ_T0033292.1 MGP_WSBEiJ_G0018868.1 mouse_genomes_project 11 123781988 123789045 + MGP_WSBEiJ_P0033292 Anapc11 protein_coding protein_coding MGP_WSBEiJ_T0033293.1 MGP_WSBEiJ_G0018868.1 mouse_genomes_project 11 123787212 123788761 + Anapc11 protein_coding processed_transcript MGP_WSBEiJ_T0029064.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68333831 68341541 + Myh10 protein_coding processed_transcript MGP_WSBEiJ_T0029065.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68334187 68467176 + MGP_WSBEiJ_P0029065 Myh10 protein_coding protein_coding MGP_WSBEiJ_T0029066.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68334350 68341700 + Myh10 protein_coding processed_transcript MGP_WSBEiJ_T0029067.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68334353 68390795 + MGP_WSBEiJ_P0029067 Myh10 protein_coding protein_coding MGP_WSBEiJ_T0029068.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68334384 68467156 + MGP_WSBEiJ_P0029068 Myh10 protein_coding protein_coding MGP_WSBEiJ_T0029069.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68334426 68414969 + Myh10 protein_coding retained_intron MGP_WSBEiJ_T0029070.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68334588 68467168 + MGP_WSBEiJ_P0029070 Myh10 protein_coding protein_coding MGP_WSBEiJ_T0029071.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68428757 68435466 + Myh10 protein_coding processed_transcript MGP_WSBEiJ_T0029072.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68459154 68460747 + Myh10 protein_coding processed_transcript MGP_WSBEiJ_T0029073.1 MGP_WSBEiJ_G0017866.1 mouse_genomes_project 11 68463865 68467088 + Myh10 protein_coding processed_transcript MGP_WSBEiJ_T0031281.1 MGP_WSBEiJ_G0018402.1 mouse_genomes_project 11 99363485 99365751 + MGP_WSBEiJ_P0031281 B230217C12Rik protein_coding protein_coding MGP_WSBEiJ_T0031282.1 MGP_WSBEiJ_G0018402.1 mouse_genomes_project 11 99363997 99366817 + B230217C12Rik protein_coding lincRNA MGP_WSBEiJ_T0031283.1 MGP_WSBEiJ_G0018402.1 mouse_genomes_project 11 99364019 99366530 + B230217C12Rik protein_coding processed_transcript MGP_WSBEiJ_T0031284.1 MGP_WSBEiJ_G0018402.1 mouse_genomes_project 11 99364023 99365751 + B230217C12Rik protein_coding processed_transcript MGP_WSBEiJ_T0012515.1 MGP_WSBEiJ_G0010645.1 mouse_genomes_project 11 124628958 124629293 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003164.1 MGP_WSBEiJ_G0002938.1 mouse_genomes_project 11 80612003 80630666 - Adap2os antisense antisense MGP_WSBEiJ_T0032603.1 MGP_WSBEiJ_G0018739.1 mouse_genomes_project 11 118198279 118214365 + MGP_WSBEiJ_P0032603 Cdr2l protein_coding protein_coding MGP_WSBEiJ_T0030568.1 MGP_WSBEiJ_G0018230.1 mouse_genomes_project 11 85245769 85253001 - MGP_WSBEiJ_P0030568 Lhx1 protein_coding protein_coding MGP_WSBEiJ_T0030569.1 MGP_WSBEiJ_G0018230.1 mouse_genomes_project 11 85246919 85249797 - MGP_WSBEiJ_P0030569 Lhx1 protein_coding protein_coding MGP_WSBEiJ_T0030570.1 MGP_WSBEiJ_G0018230.1 mouse_genomes_project 11 85247183 85249533 - Lhx1 protein_coding retained_intron MGP_WSBEiJ_T0030571.1 MGP_WSBEiJ_G0018230.1 mouse_genomes_project 11 85249361 85250178 - MGP_WSBEiJ_P0030571 Lhx1 protein_coding protein_coding MGP_WSBEiJ_T0011601.1 MGP_WSBEiJ_G0009755.1 mouse_genomes_project 11 74023535 74024474 + MGP_WSBEiJ_P0011601 Olfr22-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0006255.1 MGP_WSBEiJ_G0005216.1 mouse_genomes_project 11 113024746 113026638 + Gm11682 lincRNA lincRNA MGP_WSBEiJ_T0031033.1 MGP_WSBEiJ_G0018339.1 mouse_genomes_project 11 96678050 96725926 + MGP_WSBEiJ_P0031033 Fam117a protein_coding protein_coding MGP_WSBEiJ_T0031034.1 MGP_WSBEiJ_G0018339.1 mouse_genomes_project 11 96678052 96719137 + Fam117a protein_coding processed_transcript MGP_WSBEiJ_T0031035.1 MGP_WSBEiJ_G0018339.1 mouse_genomes_project 11 96682216 96719686 + Fam117a protein_coding processed_transcript MGP_WSBEiJ_T0031036.1 MGP_WSBEiJ_G0018339.1 mouse_genomes_project 11 96682218 96707116 + Fam117a protein_coding processed_transcript MGP_WSBEiJ_T0031037.1 MGP_WSBEiJ_G0018339.1 mouse_genomes_project 11 96682247 96719141 + Fam117a protein_coding processed_transcript MGP_WSBEiJ_T0031038.1 MGP_WSBEiJ_G0018339.1 mouse_genomes_project 11 96719520 96721639 + Fam117a protein_coding processed_transcript MGP_WSBEiJ_T0006265.1 MGP_WSBEiJ_G0005222.1 mouse_genomes_project 11 115842486 115848848 - 4732490B19Rik lincRNA lincRNA MGP_WSBEiJ_T0003072.1 MGP_WSBEiJ_G0002859.1 mouse_genomes_project 11 41317634 41379475 - Gm12146 antisense antisense MGP_WSBEiJ_T0003216.1 MGP_WSBEiJ_G0002977.1 mouse_genomes_project 11 101154616 101155413 + A830036E02Rik antisense antisense MGP_WSBEiJ_T0003217.1 MGP_WSBEiJ_G0002977.1 mouse_genomes_project 11 101154903 101160736 + A830036E02Rik antisense antisense MGP_WSBEiJ_T0003218.1 MGP_WSBEiJ_G0002977.1 mouse_genomes_project 11 101154908 101155956 + A830036E02Rik antisense antisense MGP_WSBEiJ_T0003219.1 MGP_WSBEiJ_G0002977.1 mouse_genomes_project 11 101157632 101163135 + A830036E02Rik antisense antisense MGP_WSBEiJ_T0029984.1 MGP_WSBEiJ_G0018085.1 mouse_genomes_project 11 76194325 76197977 + MGP_WSBEiJ_P0029984 1700016K19Rik protein_coding protein_coding MGP_WSBEiJ_T0029471.1 MGP_WSBEiJ_G0017952.1 mouse_genomes_project 11 70039022 70052769 - MGP_WSBEiJ_P0029471 Alox12 protein_coding protein_coding MGP_WSBEiJ_T0029472.1 MGP_WSBEiJ_G0017952.1 mouse_genomes_project 11 70046374 70052757 - MGP_WSBEiJ_P0029472 Alox12 protein_coding protein_coding MGP_WSBEiJ_T0009507.1 MGP_WSBEiJ_G0007664.1 mouse_genomes_project 11 18230855 18230972 - Gm23681 miRNA miRNA MGP_WSBEiJ_T0098931.1 MGP_WSBEiJ_G0037594.1 mouse_genomes_project 11 69429816 69429960 - Gm22988 snoRNA snoRNA MGP_WSBEiJ_T0006217.1 MGP_WSBEiJ_G0005188.1 mouse_genomes_project 11 89695885 89699858 + C030037D09Rik lincRNA lincRNA MGP_WSBEiJ_T0006218.1 MGP_WSBEiJ_G0005188.1 mouse_genomes_project 11 89696044 89708343 + C030037D09Rik lincRNA lincRNA MGP_WSBEiJ_T0006219.1 MGP_WSBEiJ_G0005188.1 mouse_genomes_project 11 89697729 89701431 + C030037D09Rik lincRNA lincRNA MGP_WSBEiJ_T0003136.1 MGP_WSBEiJ_G0002915.1 mouse_genomes_project 11 66747929 66752362 - 9430073C21Rik antisense antisense MGP_WSBEiJ_T0011596.1 MGP_WSBEiJ_G0009751.1 mouse_genomes_project 11 73419651 73439388 - MGP_WSBEiJ_P0011596 Olfr377-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0003120.1 MGP_WSBEiJ_G0002902.1 mouse_genomes_project 11 61909236 61910231 - Gm12279 antisense antisense MGP_WSBEiJ_T0032465.1 MGP_WSBEiJ_G0018703.1 mouse_genomes_project 11 113573393 113589390 + MGP_WSBEiJ_P0032465 Kcnj2 protein_coding protein_coding MGP_WSBEiJ_T0027182.1 MGP_WSBEiJ_G0017377.1 mouse_genomes_project 11 2762654 2764747 - MGP_WSBEiJ_P0027182 Pgam2 protein_coding protein_coding MGP_WSBEiJ_T0032663.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118432221 118453494 - MGP_WSBEiJ_P0032663 Gga3 protein_coding protein_coding MGP_WSBEiJ_T0032664.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118432221 118453494 - MGP_WSBEiJ_P0032664 Gga3 protein_coding protein_coding MGP_WSBEiJ_T0032665.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118432221 118453494 - MGP_WSBEiJ_P0032665 Gga3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032666.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118432330 118438371 - Gga3 protein_coding processed_transcript MGP_WSBEiJ_T0032667.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118433670 118437022 - Gga3 protein_coding processed_transcript MGP_WSBEiJ_T0032668.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118433753 118453327 - Gga3 protein_coding processed_transcript MGP_WSBEiJ_T0032669.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118435551 118435994 - Gga3 protein_coding processed_transcript MGP_WSBEiJ_T0032670.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118435902 118453319 - Gga3 protein_coding processed_transcript MGP_WSBEiJ_T0032671.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118436443 118453331 - Gga3 protein_coding processed_transcript MGP_WSBEiJ_T0032672.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118440491 118453336 - MGP_WSBEiJ_P0032672 Gga3 protein_coding protein_coding MGP_WSBEiJ_T0032673.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118441348 118453167 - Gga3 protein_coding processed_transcript MGP_WSBEiJ_T0032674.1 MGP_WSBEiJ_G0018750.1 mouse_genomes_project 11 118441366 118453323 - Gga3 protein_coding processed_transcript MGP_WSBEiJ_T0032637.1 MGP_WSBEiJ_G0018745.1 mouse_genomes_project 11 118297128 118316171 + MGP_WSBEiJ_P0032637 Armc7 protein_coding protein_coding MGP_WSBEiJ_T0032638.1 MGP_WSBEiJ_G0018745.1 mouse_genomes_project 11 118297159 118308426 + Armc7 protein_coding processed_transcript MGP_WSBEiJ_T0032639.1 MGP_WSBEiJ_G0018745.1 mouse_genomes_project 11 118297203 118309945 + Armc7 protein_coding processed_transcript MGP_WSBEiJ_T0032640.1 MGP_WSBEiJ_G0018745.1 mouse_genomes_project 11 118297415 118314766 + Armc7 protein_coding processed_transcript MGP_WSBEiJ_T0003066.1 MGP_WSBEiJ_G0002853.1 mouse_genomes_project 11 27780472 27782197 + Gm29237 antisense antisense MGP_WSBEiJ_T0027901.1 MGP_WSBEiJ_G0017551.1 mouse_genomes_project 11 44095936 44096478 + MGP_WSBEiJ_P0027901 protein_coding protein_coding MGP_WSBEiJ_T0029738.1 MGP_WSBEiJ_G0018008.1 mouse_genomes_project 11 72788400 72846308 + Zzef1 protein_coding retained_intron MGP_WSBEiJ_T0029739.1 MGP_WSBEiJ_G0018008.1 mouse_genomes_project 11 72788400 72924455 + MGP_WSBEiJ_P0029739 Zzef1 protein_coding protein_coding MGP_WSBEiJ_T0029740.1 MGP_WSBEiJ_G0018008.1 mouse_genomes_project 11 72788428 72924453 + MGP_WSBEiJ_P0029740 Zzef1 protein_coding protein_coding MGP_WSBEiJ_T0029741.1 MGP_WSBEiJ_G0018008.1 mouse_genomes_project 11 72830085 72924443 + MGP_WSBEiJ_P0029741 Zzef1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029742.1 MGP_WSBEiJ_G0018008.1 mouse_genomes_project 11 72835616 72845673 + Zzef1 protein_coding processed_transcript MGP_WSBEiJ_T0029743.1 MGP_WSBEiJ_G0018008.1 mouse_genomes_project 11 72909640 72923151 + Zzef1 protein_coding retained_intron MGP_WSBEiJ_T0029744.1 MGP_WSBEiJ_G0018008.1 mouse_genomes_project 11 72912287 72916232 + Zzef1 protein_coding retained_intron MGP_WSBEiJ_T0029745.1 MGP_WSBEiJ_G0018008.1 mouse_genomes_project 11 72918177 72924455 + Zzef1 protein_coding retained_intron MGP_WSBEiJ_T0012403.1 MGP_WSBEiJ_G0010533.1 mouse_genomes_project 11 74848215 74848383 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009546.1 MGP_WSBEiJ_G0007703.1 mouse_genomes_project 11 68667047 68667152 - Mir3062 miRNA miRNA MGP_WSBEiJ_T0031376.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100364870 100390643 - Med24 protein_coding retained_intron MGP_WSBEiJ_T0031377.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100364870 100391240 - MGP_WSBEiJ_P0031377 Med24 protein_coding protein_coding MGP_WSBEiJ_T0031378.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100365122 100366760 - Med24 protein_coding retained_intron MGP_WSBEiJ_T0031379.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100365179 100391215 - MGP_WSBEiJ_P0031379 Med24 protein_coding protein_coding MGP_WSBEiJ_T0031380.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100365179 100391172 - MGP_WSBEiJ_P0031380 Med24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031381.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100366706 100367531 - Med24 protein_coding retained_intron MGP_WSBEiJ_T0031382.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100367545 100368283 - Med24 protein_coding processed_transcript MGP_WSBEiJ_T0031383.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100369121 100391223 - Med24 protein_coding retained_intron MGP_WSBEiJ_T0031384.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100369925 100371346 - Med24 protein_coding retained_intron MGP_WSBEiJ_T0031385.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100378162 100379063 - Med24 protein_coding processed_transcript MGP_WSBEiJ_T0031386.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100378803 100391179 - MGP_WSBEiJ_P0031386 Med24 protein_coding protein_coding MGP_WSBEiJ_T0031387.1 MGP_WSBEiJ_G0018428.1 mouse_genomes_project 11 100378890 100391208 - Med24 protein_coding retained_intron MGP_WSBEiJ_T0031287.1 MGP_WSBEiJ_G0018404.1 mouse_genomes_project 11 99460922 99526855 - MGP_WSBEiJ_P0031287 Plxdc1 protein_coding protein_coding MGP_WSBEiJ_T0031288.1 MGP_WSBEiJ_G0018404.1 mouse_genomes_project 11 99461340 99526810 - MGP_WSBEiJ_P0031288 Plxdc1 protein_coding protein_coding MGP_WSBEiJ_T0031289.1 MGP_WSBEiJ_G0018404.1 mouse_genomes_project 11 99475718 99526844 - Plxdc1 protein_coding processed_transcript MGP_WSBEiJ_T0031290.1 MGP_WSBEiJ_G0018404.1 mouse_genomes_project 11 99518960 99526841 - MGP_WSBEiJ_P0031290 Plxdc1 protein_coding protein_coding MGP_WSBEiJ_T0097683.1 MGP_WSBEiJ_G0036346.1 mouse_genomes_project 11 21989904 21989977 - Gm22787 snRNA snRNA MGP_WSBEiJ_T0033021.1 MGP_WSBEiJ_G0018812.1 mouse_genomes_project 11 120902790 120907579 + MGP_WSBEiJ_P0033021 Tmem235 protein_coding protein_coding MGP_WSBEiJ_T0096914.1 MGP_WSBEiJ_G0035595.1 mouse_genomes_project 11 72249659 72249775 + n-R5s70 rRNA rRNA MGP_WSBEiJ_T0027580.1 MGP_WSBEiJ_G0017469.1 mouse_genomes_project 11 24082653 24083274 + MGP_WSBEiJ_P0027580 Gm6899 protein_coding protein_coding MGP_WSBEiJ_T0012482.1 MGP_WSBEiJ_G0010612.1 mouse_genomes_project 11 107972276 107973543 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028986.1 MGP_WSBEiJ_G0017844.1 mouse_genomes_project 11 66570811 66580946 + MGP_WSBEiJ_P0028986 Tmem220 protein_coding protein_coding MGP_WSBEiJ_T0028987.1 MGP_WSBEiJ_G0017844.1 mouse_genomes_project 11 66570811 66580434 + MGP_WSBEiJ_P0028987 Tmem220 protein_coding protein_coding MGP_WSBEiJ_T0030910.1 MGP_WSBEiJ_G0018310.1 mouse_genomes_project 11 95436609 95444357 - MGP_WSBEiJ_P0030910 Wfikkn2 protein_coding protein_coding MGP_WSBEiJ_T0030911.1 MGP_WSBEiJ_G0018310.1 mouse_genomes_project 11 95444096 95447665 - Wfikkn2 protein_coding processed_transcript MGP_WSBEiJ_T0012431.1 MGP_WSBEiJ_G0010561.1 mouse_genomes_project 11 85975591 85976049 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003270.1 MGP_WSBEiJ_G0003022.1 mouse_genomes_project 11 119373104 119381047 + Gm11739 antisense antisense MGP_WSBEiJ_T0032714.1 MGP_WSBEiJ_G0018757.1 mouse_genomes_project 11 118674163 118684028 + MGP_WSBEiJ_P0032714 Tsen54 protein_coding protein_coding MGP_WSBEiJ_T0032715.1 MGP_WSBEiJ_G0018757.1 mouse_genomes_project 11 118674163 118684028 + MGP_WSBEiJ_P0032715 Tsen54 protein_coding protein_coding MGP_WSBEiJ_T0032716.1 MGP_WSBEiJ_G0018757.1 mouse_genomes_project 11 118674185 118674985 + Tsen54 protein_coding retained_intron MGP_WSBEiJ_T0032717.1 MGP_WSBEiJ_G0018757.1 mouse_genomes_project 11 118674210 118681464 + Tsen54 protein_coding retained_intron MGP_WSBEiJ_T0032718.1 MGP_WSBEiJ_G0018757.1 mouse_genomes_project 11 118674244 118681443 + Tsen54 protein_coding retained_intron MGP_WSBEiJ_T0032719.1 MGP_WSBEiJ_G0018757.1 mouse_genomes_project 11 118675137 118682635 + MGP_WSBEiJ_P0032719 Tsen54 protein_coding protein_coding MGP_WSBEiJ_T0032720.1 MGP_WSBEiJ_G0018757.1 mouse_genomes_project 11 118681645 118684023 + MGP_WSBEiJ_P0032720 Tsen54 protein_coding protein_coding MGP_WSBEiJ_T0032721.1 MGP_WSBEiJ_G0018757.1 mouse_genomes_project 11 118681781 118683206 + MGP_WSBEiJ_P0032721 Tsen54 protein_coding protein_coding MGP_WSBEiJ_T0006134.1 MGP_WSBEiJ_G0005124.1 mouse_genomes_project 11 42452123 42454605 - lincRNA lincRNA MGP_WSBEiJ_T0011102.1 MGP_WSBEiJ_G0009259.1 mouse_genomes_project 11 41007428 41007740 + Gm25543 misc_RNA misc_RNA MGP_WSBEiJ_T0033097.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122325580 122328710 + Ccdc40 protein_coding processed_transcript MGP_WSBEiJ_T0033098.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122325586 122328626 + Ccdc40 protein_coding processed_transcript MGP_WSBEiJ_T0033099.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122326110 122362589 + MGP_WSBEiJ_P0033099 Ccdc40 protein_coding protein_coding MGP_WSBEiJ_T0033100.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122326115 122364923 + MGP_WSBEiJ_P0033100 Ccdc40 protein_coding protein_coding MGP_WSBEiJ_T0033101.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122335685 122351488 + Ccdc40 protein_coding retained_intron MGP_WSBEiJ_T0033102.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122353242 122364113 + Ccdc40 protein_coding retained_intron MGP_WSBEiJ_T0033103.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122358616 122364913 + Ccdc40 protein_coding processed_transcript MGP_WSBEiJ_T0033104.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122359455 122362809 + Ccdc40 protein_coding retained_intron MGP_WSBEiJ_T0033105.1 MGP_WSBEiJ_G0018831.1 mouse_genomes_project 11 122362560 122363983 + Ccdc40 protein_coding retained_intron MGP_WSBEiJ_T0033425.1 MGP_WSBEiJ_G0018891.1 mouse_genomes_project 11 124259154 124269985 - MGP_WSBEiJ_P0033425 Sectm1b protein_coding protein_coding MGP_WSBEiJ_T0033426.1 MGP_WSBEiJ_G0018891.1 mouse_genomes_project 11 124260227 124269954 - MGP_WSBEiJ_P0033426 Sectm1b protein_coding protein_coding MGP_WSBEiJ_T0033427.1 MGP_WSBEiJ_G0018891.1 mouse_genomes_project 11 124260232 124262027 - MGP_WSBEiJ_P0033427 Sectm1b protein_coding protein_coding MGP_WSBEiJ_T0033428.1 MGP_WSBEiJ_G0018891.1 mouse_genomes_project 11 124260251 124269961 - MGP_WSBEiJ_P0033428 Sectm1b protein_coding protein_coding MGP_WSBEiJ_T0033429.1 MGP_WSBEiJ_G0018891.1 mouse_genomes_project 11 124260620 124269871 - MGP_WSBEiJ_P0033429 Sectm1b protein_coding protein_coding MGP_WSBEiJ_T0033430.1 MGP_WSBEiJ_G0018891.1 mouse_genomes_project 11 124261075 124269719 - Sectm1b protein_coding retained_intron MGP_WSBEiJ_T0033431.1 MGP_WSBEiJ_G0018891.1 mouse_genomes_project 11 124261897 124262292 - Sectm1b protein_coding processed_transcript MGP_WSBEiJ_T0031984.1 MGP_WSBEiJ_G0018593.1 mouse_genomes_project 11 104600241 104603301 - MGP_WSBEiJ_P0031984 Gm11627 protein_coding protein_coding MGP_WSBEiJ_T0031985.1 MGP_WSBEiJ_G0018593.1 mouse_genomes_project 11 104600287 104603115 - Gm11627 protein_coding processed_transcript MGP_WSBEiJ_T0031986.1 MGP_WSBEiJ_G0018593.1 mouse_genomes_project 11 104600334 104602959 - MGP_WSBEiJ_P0031986 Gm11627 protein_coding protein_coding MGP_WSBEiJ_T0032048.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105161730 105172946 + MGP_WSBEiJ_P0032048 Acbd4 protein_coding protein_coding MGP_WSBEiJ_T0032049.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105161730 105172949 + MGP_WSBEiJ_P0032049 Acbd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032050.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105161734 105164064 + Acbd4 protein_coding processed_transcript MGP_WSBEiJ_T0032051.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105161734 105165442 + MGP_WSBEiJ_P0032051 Acbd4 protein_coding protein_coding MGP_WSBEiJ_T0032052.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105161736 105172948 + MGP_WSBEiJ_P0032052 Acbd4 protein_coding protein_coding MGP_WSBEiJ_T0032053.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105161757 105163428 + Acbd4 protein_coding retained_intron MGP_WSBEiJ_T0032054.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105161760 105164222 + MGP_WSBEiJ_P0032054 Acbd4 protein_coding protein_coding MGP_WSBEiJ_T0032055.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105161774 105163266 + Acbd4 protein_coding retained_intron MGP_WSBEiJ_T0032056.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105163063 105165516 + MGP_WSBEiJ_P0032056 Acbd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0032057.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105163116 105165501 + Acbd4 protein_coding processed_transcript MGP_WSBEiJ_T0032058.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105163118 105164895 + MGP_WSBEiJ_P0032058 Acbd4 protein_coding protein_coding MGP_WSBEiJ_T0032059.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105163150 105164141 + Acbd4 protein_coding retained_intron MGP_WSBEiJ_T0032060.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105163294 105164531 + Acbd4 protein_coding retained_intron MGP_WSBEiJ_T0032061.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105164753 105172702 + Acbd4 protein_coding retained_intron MGP_WSBEiJ_T0032062.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105166232 105172488 + Acbd4 protein_coding processed_transcript MGP_WSBEiJ_T0032063.1 MGP_WSBEiJ_G0018609.1 mouse_genomes_project 11 105166253 105172946 + Acbd4 protein_coding processed_transcript MGP_WSBEiJ_T0028453.1 MGP_WSBEiJ_G0017702.1 mouse_genomes_project 11 56589219 56743475 + MGP_WSBEiJ_P0028453 Galnt10 protein_coding protein_coding MGP_WSBEiJ_T0028454.1 MGP_WSBEiJ_G0017702.1 mouse_genomes_project 11 56589242 56681795 + MGP_WSBEiJ_P0028454 Galnt10 protein_coding protein_coding MGP_WSBEiJ_T0030699.1 MGP_WSBEiJ_G0018259.1 mouse_genomes_project 11 87926345 87945728 - MGP_WSBEiJ_P0030699 Prr11 protein_coding protein_coding MGP_WSBEiJ_T0030245.1 MGP_WSBEiJ_G0018136.1 mouse_genomes_project 11 78665319 78683845 + MGP_WSBEiJ_P0030245 Pigs protein_coding protein_coding MGP_WSBEiJ_T0030893.1 MGP_WSBEiJ_G0018306.1 mouse_genomes_project 11 95122066 95142799 - MGP_WSBEiJ_P0030893 Gm20390 protein_coding protein_coding MGP_WSBEiJ_T0027987.1 MGP_WSBEiJ_G0017581.1 mouse_genomes_project 11 47457349 47466347 - MGP_WSBEiJ_P0027987 Tgtp2 protein_coding protein_coding MGP_WSBEiJ_T0027989.1 MGP_WSBEiJ_G0017581.1 mouse_genomes_project 11 47460784 47466349 - Tgtp2 protein_coding processed_transcript MGP_WSBEiJ_T0006132.1 MGP_WSBEiJ_G0005122.1 mouse_genomes_project 11 41518149 41519859 + Gm12148 lincRNA lincRNA MGP_WSBEiJ_T0012484.1 MGP_WSBEiJ_G0010614.1 mouse_genomes_project 11 109275054 109275886 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098932.1 MGP_WSBEiJ_G0037595.1 mouse_genomes_project 11 71153820 71153954 - snoRNA snoRNA MGP_WSBEiJ_T0009524.1 MGP_WSBEiJ_G0007681.1 mouse_genomes_project 11 48286951 48287028 + Gm23813 miRNA miRNA MGP_WSBEiJ_T0029372.1 MGP_WSBEiJ_G0017934.1 mouse_genomes_project 11 69747190 69749336 + MGP_WSBEiJ_P0029372 Cldn7 protein_coding protein_coding MGP_WSBEiJ_T0029373.1 MGP_WSBEiJ_G0017934.1 mouse_genomes_project 11 69748293 69750256 + MGP_WSBEiJ_P0029373 Cldn7 protein_coding protein_coding MGP_WSBEiJ_T0029374.1 MGP_WSBEiJ_G0017934.1 mouse_genomes_project 11 69749284 69750019 + MGP_WSBEiJ_P0029374 Cldn7 protein_coding protein_coding MGP_WSBEiJ_T0029537.1 MGP_WSBEiJ_G0017967.1 mouse_genomes_project 11 70442512 70443540 + MGP_WSBEiJ_P0029537 4930544D05Rik protein_coding protein_coding MGP_WSBEiJ_T0029538.1 MGP_WSBEiJ_G0017967.1 mouse_genomes_project 11 70442558 70443535 + 4930544D05Rik protein_coding retained_intron MGP_WSBEiJ_T0029539.1 MGP_WSBEiJ_G0017967.1 mouse_genomes_project 11 70442561 70443555 + MGP_WSBEiJ_P0029539 4930544D05Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029540.1 MGP_WSBEiJ_G0017967.1 mouse_genomes_project 11 70442574 70443542 + MGP_WSBEiJ_P0029540 4930544D05Rik protein_coding protein_coding MGP_WSBEiJ_T0097737.1 MGP_WSBEiJ_G0036400.1 mouse_genomes_project 11 103558211 103558402 + Gm23849 snRNA snRNA MGP_WSBEiJ_T0029762.1 MGP_WSBEiJ_G0018014.1 mouse_genomes_project 11 73141770 73144578 - MGP_WSBEiJ_P0029762 Gsg2 protein_coding protein_coding MGP_WSBEiJ_T0030812.1 MGP_WSBEiJ_G0018284.1 mouse_genomes_project 11 89819245 89840834 - MGP_WSBEiJ_P0030812 Akap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030813.1 MGP_WSBEiJ_G0018284.1 mouse_genomes_project 11 89819245 89840834 - MGP_WSBEiJ_P0030813 Akap1 protein_coding protein_coding MGP_WSBEiJ_T0030814.1 MGP_WSBEiJ_G0018284.1 mouse_genomes_project 11 89819245 89854289 - MGP_WSBEiJ_P0030814 Akap1 protein_coding protein_coding MGP_WSBEiJ_T0030815.1 MGP_WSBEiJ_G0018284.1 mouse_genomes_project 11 89820209 89853420 - MGP_WSBEiJ_P0030815 Akap1 protein_coding protein_coding MGP_WSBEiJ_T0030816.1 MGP_WSBEiJ_G0018284.1 mouse_genomes_project 11 89826466 89830993 - Akap1 protein_coding retained_intron MGP_WSBEiJ_T0030817.1 MGP_WSBEiJ_G0018284.1 mouse_genomes_project 11 89828421 89833995 - MGP_WSBEiJ_P0030817 Akap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027982.1 MGP_WSBEiJ_G0017579.1 mouse_genomes_project 11 47434891 47448693 - MGP_WSBEiJ_P0027982 protein_coding protein_coding MGP_WSBEiJ_T0006248.1 MGP_WSBEiJ_G0005209.1 mouse_genomes_project 11 104915420 105143853 + Gm26668 lincRNA lincRNA MGP_WSBEiJ_T0028932.1 MGP_WSBEiJ_G0017827.1 mouse_genomes_project 11 62271476 62287193 + MGP_WSBEiJ_P0028932 Tvp23b protein_coding protein_coding MGP_WSBEiJ_T0028933.1 MGP_WSBEiJ_G0017827.1 mouse_genomes_project 11 62271511 62284053 + Tvp23b protein_coding processed_transcript MGP_WSBEiJ_T0028934.1 MGP_WSBEiJ_G0017827.1 mouse_genomes_project 11 62271635 62277368 + Tvp23b protein_coding processed_transcript MGP_WSBEiJ_T0028935.1 MGP_WSBEiJ_G0017827.1 mouse_genomes_project 11 62275683 62308074 + Tvp23b protein_coding processed_transcript MGP_WSBEiJ_T0009562.1 MGP_WSBEiJ_G0007719.1 mouse_genomes_project 11 74988182 74988250 - Mir6926 miRNA miRNA MGP_WSBEiJ_T0029868.1 MGP_WSBEiJ_G0018061.1 mouse_genomes_project 11 75014592 75021460 + MGP_WSBEiJ_P0029868 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029869.1 MGP_WSBEiJ_G0018061.1 mouse_genomes_project 11 75014619 75018376 + protein_coding retained_intron MGP_WSBEiJ_T0029870.1 MGP_WSBEiJ_G0018061.1 mouse_genomes_project 11 75014635 75026809 + MGP_WSBEiJ_P0029870 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029871.1 MGP_WSBEiJ_G0018061.1 mouse_genomes_project 11 75014640 75020549 + MGP_WSBEiJ_P0029871 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029872.1 MGP_WSBEiJ_G0018061.1 mouse_genomes_project 11 75018233 75020425 + protein_coding retained_intron MGP_WSBEiJ_T0029873.1 MGP_WSBEiJ_G0018061.1 mouse_genomes_project 11 75020489 75026629 + MGP_WSBEiJ_P0029873 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029874.1 MGP_WSBEiJ_G0018061.1 mouse_genomes_project 11 75021730 75026658 + protein_coding retained_intron MGP_WSBEiJ_T0031500.1 MGP_WSBEiJ_G0018487.1 mouse_genomes_project 11 101771007 101772895 - MGP_WSBEiJ_P0031500 Krtap16-1 protein_coding protein_coding MGP_WSBEiJ_T0031139.1 MGP_WSBEiJ_G0018371.1 mouse_genomes_project 11 98266931 98279510 - MGP_WSBEiJ_P0031139 Nfe2l1 protein_coding protein_coding MGP_WSBEiJ_T0031140.1 MGP_WSBEiJ_G0018371.1 mouse_genomes_project 11 98266931 98273531 - MGP_WSBEiJ_P0031140 Nfe2l1 protein_coding protein_coding MGP_WSBEiJ_T0031141.1 MGP_WSBEiJ_G0018371.1 mouse_genomes_project 11 98267116 98277239 - MGP_WSBEiJ_P0031141 Nfe2l1 protein_coding protein_coding MGP_WSBEiJ_T0031142.1 MGP_WSBEiJ_G0018371.1 mouse_genomes_project 11 98269610 98273645 - MGP_WSBEiJ_P0031142 Nfe2l1 protein_coding protein_coding MGP_WSBEiJ_T0031143.1 MGP_WSBEiJ_G0018371.1 mouse_genomes_project 11 98269987 98273526 - MGP_WSBEiJ_P0031143 Nfe2l1 protein_coding protein_coding MGP_WSBEiJ_T0031144.1 MGP_WSBEiJ_G0018371.1 mouse_genomes_project 11 98270863 98272243 - Nfe2l1 protein_coding processed_transcript MGP_WSBEiJ_T0031145.1 MGP_WSBEiJ_G0018371.1 mouse_genomes_project 11 98271740 98274070 - Nfe2l1 protein_coding processed_transcript MGP_WSBEiJ_T0031146.1 MGP_WSBEiJ_G0018371.1 mouse_genomes_project 11 98277252 98279015 - Nfe2l1 protein_coding processed_transcript MGP_WSBEiJ_T0100465.1 MGP_WSBEiJ_G0038924.1 mouse_genomes_project 11 44949877 44950150 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0029143.1 MGP_WSBEiJ_G0017879.1 mouse_genomes_project 11 68768759 68772661 + MGP_WSBEiJ_P0029143 Vamp2 protein_coding protein_coding MGP_WSBEiJ_T0029144.1 MGP_WSBEiJ_G0017879.1 mouse_genomes_project 11 68768779 68770966 + MGP_WSBEiJ_P0029144 Vamp2 protein_coding protein_coding MGP_WSBEiJ_T0029145.1 MGP_WSBEiJ_G0017879.1 mouse_genomes_project 11 68768791 68769954 + Vamp2 protein_coding retained_intron MGP_WSBEiJ_T0029146.1 MGP_WSBEiJ_G0017879.1 mouse_genomes_project 11 68768812 68770329 + Vamp2 protein_coding processed_transcript MGP_WSBEiJ_T0029147.1 MGP_WSBEiJ_G0017879.1 mouse_genomes_project 11 68769884 68770455 + Vamp2 protein_coding retained_intron MGP_WSBEiJ_T0033358.1 MGP_WSBEiJ_G0018877.1 mouse_genomes_project 11 123904582 123905624 - protein_coding processed_transcript MGP_WSBEiJ_T0033359.1 MGP_WSBEiJ_G0018877.1 mouse_genomes_project 11 123904582 123907384 - MGP_WSBEiJ_P0033359 protein_coding protein_coding MGP_WSBEiJ_T0033360.1 MGP_WSBEiJ_G0018877.1 mouse_genomes_project 11 123904582 123907384 - MGP_WSBEiJ_P0033360 protein_coding protein_coding MGP_WSBEiJ_T0033361.1 MGP_WSBEiJ_G0018877.1 mouse_genomes_project 11 123904582 123907390 - MGP_WSBEiJ_P0033361 protein_coding protein_coding MGP_WSBEiJ_T0033362.1 MGP_WSBEiJ_G0018877.1 mouse_genomes_project 11 123904583 123907390 - MGP_WSBEiJ_P0033362 protein_coding protein_coding MGP_WSBEiJ_T0031978.1 MGP_WSBEiJ_G0018592.1 mouse_genomes_project 11 104491557 104576619 - MGP_WSBEiJ_P0031978 Gpatch8 protein_coding protein_coding MGP_WSBEiJ_T0031979.1 MGP_WSBEiJ_G0018592.1 mouse_genomes_project 11 104492849 104524745 - Gpatch8 protein_coding processed_transcript MGP_WSBEiJ_T0031980.1 MGP_WSBEiJ_G0018592.1 mouse_genomes_project 11 104523791 104576619 - Gpatch8 protein_coding processed_transcript MGP_WSBEiJ_T0031981.1 MGP_WSBEiJ_G0018592.1 mouse_genomes_project 11 104524470 104576619 - Gpatch8 protein_coding processed_transcript MGP_WSBEiJ_T0031982.1 MGP_WSBEiJ_G0018592.1 mouse_genomes_project 11 104557456 104576596 - Gpatch8 protein_coding processed_transcript MGP_WSBEiJ_T0031983.1 MGP_WSBEiJ_G0018592.1 mouse_genomes_project 11 104558346 104576812 - Gpatch8 protein_coding processed_transcript MGP_WSBEiJ_T0032279.1 MGP_WSBEiJ_G0018664.1 mouse_genomes_project 11 108732807 108852008 - MGP_WSBEiJ_P0032279 Tex2 protein_coding protein_coding MGP_WSBEiJ_T0032280.1 MGP_WSBEiJ_G0018664.1 mouse_genomes_project 11 108776443 108812791 - MGP_WSBEiJ_P0032280 Tex2 protein_coding protein_coding MGP_WSBEiJ_T0032281.1 MGP_WSBEiJ_G0018664.1 mouse_genomes_project 11 108800801 108852501 - MGP_WSBEiJ_P0032281 Tex2 protein_coding protein_coding MGP_WSBEiJ_T0032282.1 MGP_WSBEiJ_G0018664.1 mouse_genomes_project 11 108801186 108816986 - MGP_WSBEiJ_P0032282 Tex2 protein_coding protein_coding MGP_WSBEiJ_T0030503.1 MGP_WSBEiJ_G0018210.1 mouse_genomes_project 11 84144105 84161955 + Taf15 protein_coding processed_transcript MGP_WSBEiJ_T0030504.1 MGP_WSBEiJ_G0018210.1 mouse_genomes_project 11 84144111 84181984 + MGP_WSBEiJ_P0030504 Taf15 protein_coding protein_coding MGP_WSBEiJ_T0030505.1 MGP_WSBEiJ_G0018210.1 mouse_genomes_project 11 84144130 84155320 + Taf15 protein_coding retained_intron MGP_WSBEiJ_T0030506.1 MGP_WSBEiJ_G0018210.1 mouse_genomes_project 11 84144134 84161787 + Taf15 protein_coding processed_transcript MGP_WSBEiJ_T0030507.1 MGP_WSBEiJ_G0018210.1 mouse_genomes_project 11 84144219 84164563 + MGP_WSBEiJ_P0030507 Taf15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0030508.1 MGP_WSBEiJ_G0018210.1 mouse_genomes_project 11 84161768 84181984 + MGP_WSBEiJ_P0030508 Taf15 protein_coding protein_coding MGP_WSBEiJ_T0032159.1 MGP_WSBEiJ_G0018633.1 mouse_genomes_project 11 106753226 106809546 + MGP_WSBEiJ_P0032159 Itgb3 protein_coding protein_coding MGP_WSBEiJ_T0032160.1 MGP_WSBEiJ_G0018633.1 mouse_genomes_project 11 106782696 106808881 + Itgb3 protein_coding processed_transcript MGP_WSBEiJ_T0031479.1 MGP_WSBEiJ_G0018466.1 mouse_genomes_project 11 101356736 101358116 - MGP_WSBEiJ_P0031479 Krtap2-4 protein_coding protein_coding MGP_WSBEiJ_T0028159.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49861083 49872970 + MGP_WSBEiJ_P0028159 Clk4 protein_coding protein_coding MGP_WSBEiJ_T0028160.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49861083 49871363 + MGP_WSBEiJ_P0028160 Clk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028161.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49862469 49880309 + MGP_WSBEiJ_P0028161 Clk4 protein_coding protein_coding MGP_WSBEiJ_T0028162.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49862505 49874603 + MGP_WSBEiJ_P0028162 Clk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028163.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49862517 49866863 + Clk4 protein_coding retained_intron MGP_WSBEiJ_T0028164.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49862519 49871708 + Clk4 protein_coding retained_intron MGP_WSBEiJ_T0028165.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49862524 49872966 + MGP_WSBEiJ_P0028165 Clk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028166.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49862529 49871404 + Clk4 protein_coding retained_intron MGP_WSBEiJ_T0028167.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49862541 49880311 + MGP_WSBEiJ_P0028167 Clk4 protein_coding protein_coding MGP_WSBEiJ_T0028168.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49871342 49876559 + Clk4 protein_coding retained_intron MGP_WSBEiJ_T0028169.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49872794 49880309 + MGP_WSBEiJ_P0028169 Clk4 protein_coding protein_coding MGP_WSBEiJ_T0028170.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49872955 49875581 + Clk4 protein_coding retained_intron MGP_WSBEiJ_T0028171.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49874251 49874856 + Clk4 protein_coding retained_intron MGP_WSBEiJ_T0028172.1 MGP_WSBEiJ_G0017629.1 mouse_genomes_project 11 49878651 49879743 + Clk4 protein_coding retained_intron MGP_WSBEiJ_T0031471.1 MGP_WSBEiJ_G0018458.1 mouse_genomes_project 11 101306881 101307485 - MGP_WSBEiJ_P0031471 Krtap3-1 protein_coding protein_coding MGP_WSBEiJ_T0027977.1 MGP_WSBEiJ_G0017575.1 mouse_genomes_project 11 47268905 47398625 - MGP_WSBEiJ_P0027977 protein_coding protein_coding MGP_WSBEiJ_T0027978.1 MGP_WSBEiJ_G0017575.1 mouse_genomes_project 11 47285462 47466347 - protein_coding processed_transcript MGP_WSBEiJ_T0027692.1 MGP_WSBEiJ_G0017496.1 mouse_genomes_project 11 29925382 29938823 - MGP_WSBEiJ_P0027692 Il9r protein_coding protein_coding MGP_WSBEiJ_T0027693.1 MGP_WSBEiJ_G0017496.1 mouse_genomes_project 11 29926832 29938880 - MGP_WSBEiJ_P0027693 Il9r protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027694.1 MGP_WSBEiJ_G0017496.1 mouse_genomes_project 11 29928118 29938837 - MGP_WSBEiJ_P0027694 Il9r protein_coding protein_coding MGP_WSBEiJ_T0027695.1 MGP_WSBEiJ_G0017496.1 mouse_genomes_project 11 29928334 29938823 - MGP_WSBEiJ_P0027695 Il9r protein_coding protein_coding MGP_WSBEiJ_T0027696.1 MGP_WSBEiJ_G0017496.1 mouse_genomes_project 11 29932418 29938880 - Il9r protein_coding retained_intron MGP_WSBEiJ_T0003271.1 MGP_WSBEiJ_G0003023.1 mouse_genomes_project 11 119443890 119447739 - Gm29292 antisense antisense MGP_WSBEiJ_T0006122.1 MGP_WSBEiJ_G0005112.1 mouse_genomes_project 11 30690658 30715779 - Gm12111 lincRNA lincRNA MGP_WSBEiJ_T0027308.1 MGP_WSBEiJ_G0017408.1 mouse_genomes_project 11 6081545 6105382 - MGP_WSBEiJ_P0027308 Sun3 protein_coding protein_coding MGP_WSBEiJ_T0027309.1 MGP_WSBEiJ_G0017408.1 mouse_genomes_project 11 6081545 6118279 - MGP_WSBEiJ_P0027309 Sun3 protein_coding protein_coding MGP_WSBEiJ_T0003102.1 MGP_WSBEiJ_G0002887.1 mouse_genomes_project 11 56599140 56603033 - 4933426K07Rik antisense antisense MGP_WSBEiJ_T0029278.1 MGP_WSBEiJ_G0017910.1 mouse_genomes_project 11 69443196 69458404 - MGP_WSBEiJ_P0029278 Tnfsfm13 protein_coding protein_coding MGP_WSBEiJ_T0029281.1 MGP_WSBEiJ_G0017910.1 mouse_genomes_project 11 69443667 69458116 - MGP_WSBEiJ_P0029281 Tnfsfm13 protein_coding protein_coding MGP_WSBEiJ_T0029282.1 MGP_WSBEiJ_G0017910.1 mouse_genomes_project 11 69443850 69458115 - MGP_WSBEiJ_P0029282 Tnfsfm13 protein_coding protein_coding MGP_WSBEiJ_T0012302.1 MGP_WSBEiJ_G0010432.1 mouse_genomes_project 11 31199596 31199984 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028284.1 MGP_WSBEiJ_G0017661.1 mouse_genomes_project 11 52254715 52270529 + MGP_WSBEiJ_P0028284 Sept8 protein_coding protein_coding MGP_WSBEiJ_T0028285.1 MGP_WSBEiJ_G0017661.1 mouse_genomes_project 11 52255205 52279219 + MGP_WSBEiJ_P0028285 Sept8 protein_coding protein_coding MGP_WSBEiJ_T0028286.1 MGP_WSBEiJ_G0017661.1 mouse_genomes_project 11 52255229 52284708 + MGP_WSBEiJ_P0028286 Sept8 protein_coding protein_coding MGP_WSBEiJ_T0028287.1 MGP_WSBEiJ_G0017661.1 mouse_genomes_project 11 52255259 52279220 + MGP_WSBEiJ_P0028287 Sept8 protein_coding protein_coding MGP_WSBEiJ_T0028288.1 MGP_WSBEiJ_G0017661.1 mouse_genomes_project 11 52255367 52277006 + MGP_WSBEiJ_P0028288 Sept8 protein_coding protein_coding MGP_WSBEiJ_T0028289.1 MGP_WSBEiJ_G0017661.1 mouse_genomes_project 11 52255386 52276955 + MGP_WSBEiJ_P0028289 Sept8 protein_coding protein_coding MGP_WSBEiJ_T0028290.1 MGP_WSBEiJ_G0017661.1 mouse_genomes_project 11 52268015 52273187 + Sept8 protein_coding processed_transcript MGP_WSBEiJ_T0006261.1 MGP_WSBEiJ_G0005221.1 mouse_genomes_project 11 115668560 115840966 - 2610035D17Rik lincRNA lincRNA MGP_WSBEiJ_T0006262.1 MGP_WSBEiJ_G0005221.1 mouse_genomes_project 11 115668560 115803066 - 2610035D17Rik lincRNA lincRNA MGP_WSBEiJ_T0006263.1 MGP_WSBEiJ_G0005221.1 mouse_genomes_project 11 115668560 115840982 - 2610035D17Rik lincRNA lincRNA MGP_WSBEiJ_T0006264.1 MGP_WSBEiJ_G0005221.1 mouse_genomes_project 11 115669182 115803066 - 2610035D17Rik lincRNA lincRNA MGP_WSBEiJ_T0031375.1 MGP_WSBEiJ_G0018427.1 mouse_genomes_project 11 100360568 100363909 + MGP_WSBEiJ_P0031375 Csf3 protein_coding protein_coding MGP_WSBEiJ_T0027120.1 MGP_WSBEiJ_G0017365.1 mouse_genomes_project 11 1982545 1984783 + MGP_WSBEiJ_P0027120 Rasl10a protein_coding protein_coding MGP_WSBEiJ_T0027121.1 MGP_WSBEiJ_G0017365.1 mouse_genomes_project 11 1983355 1984460 + Rasl10a protein_coding processed_transcript MGP_WSBEiJ_T0031349.1 MGP_WSBEiJ_G0018420.1 mouse_genomes_project 11 100037787 100042829 + MGP_WSBEiJ_P0031349 Grb7 protein_coding protein_coding MGP_WSBEiJ_T0031350.1 MGP_WSBEiJ_G0018420.1 mouse_genomes_project 11 100038227 100046774 + MGP_WSBEiJ_P0031350 Grb7 protein_coding protein_coding MGP_WSBEiJ_T0031351.1 MGP_WSBEiJ_G0018420.1 mouse_genomes_project 11 100038441 100046774 + Grb7 protein_coding retained_intron MGP_WSBEiJ_T0031352.1 MGP_WSBEiJ_G0018420.1 mouse_genomes_project 11 100038461 100046774 + Grb7 protein_coding retained_intron MGP_WSBEiJ_T0031353.1 MGP_WSBEiJ_G0018420.1 mouse_genomes_project 11 100043242 100045223 + Grb7 protein_coding retained_intron MGP_WSBEiJ_T0031354.1 MGP_WSBEiJ_G0018420.1 mouse_genomes_project 11 100045189 100046526 + Grb7 protein_coding retained_intron MGP_WSBEiJ_T0003238.1 MGP_WSBEiJ_G0002996.1 mouse_genomes_project 11 106697603 106698592 - Gm11665 antisense antisense MGP_WSBEiJ_T0031618.1 MGP_WSBEiJ_G0018525.1 mouse_genomes_project 11 102623213 102664242 - MGP_WSBEiJ_P0031618 protein_coding protein_coding MGP_WSBEiJ_T0031619.1 MGP_WSBEiJ_G0018525.1 mouse_genomes_project 11 102623213 102698572 - MGP_WSBEiJ_P0031619 protein_coding protein_coding MGP_WSBEiJ_T0031620.1 MGP_WSBEiJ_G0018525.1 mouse_genomes_project 11 102639682 102698386 - protein_coding processed_transcript MGP_WSBEiJ_T0033475.1 MGP_WSBEiJ_G0018905.1 mouse_genomes_project 11 124665714 124835428 + MGP_WSBEiJ_P0033475 Tbcd protein_coding protein_coding MGP_WSBEiJ_T0033476.1 MGP_WSBEiJ_G0018905.1 mouse_genomes_project 11 124706205 124714914 + MGP_WSBEiJ_P0033476 Tbcd protein_coding protein_coding MGP_WSBEiJ_T0033477.1 MGP_WSBEiJ_G0018905.1 mouse_genomes_project 11 124717898 124794855 + MGP_WSBEiJ_P0033477 Tbcd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033479.1 MGP_WSBEiJ_G0018905.1 mouse_genomes_project 11 124763138 124810055 + Tbcd protein_coding processed_transcript MGP_WSBEiJ_T0033480.1 MGP_WSBEiJ_G0018905.1 mouse_genomes_project 11 124768817 124810032 + Tbcd protein_coding retained_intron MGP_WSBEiJ_T0033481.1 MGP_WSBEiJ_G0018905.1 mouse_genomes_project 11 124817964 124835427 + Tbcd protein_coding retained_intron MGP_WSBEiJ_T0033482.1 MGP_WSBEiJ_G0018905.1 mouse_genomes_project 11 124821267 124835427 + Tbcd protein_coding processed_transcript MGP_WSBEiJ_T0033483.1 MGP_WSBEiJ_G0018905.1 mouse_genomes_project 11 124821353 124835427 + Tbcd protein_coding processed_transcript MGP_WSBEiJ_T0028855.1 MGP_WSBEiJ_G0017814.1 mouse_genomes_project 11 61608334 61609450 + Ttc19 protein_coding processed_transcript MGP_WSBEiJ_T0028856.1 MGP_WSBEiJ_G0017814.1 mouse_genomes_project 11 61608343 61643440 + MGP_WSBEiJ_P0028856 Ttc19 protein_coding protein_coding MGP_WSBEiJ_T0028857.1 MGP_WSBEiJ_G0017814.1 mouse_genomes_project 11 61608345 61644620 + MGP_WSBEiJ_P0028857 Ttc19 protein_coding protein_coding MGP_WSBEiJ_T0028858.1 MGP_WSBEiJ_G0017814.1 mouse_genomes_project 11 61610531 61656127 + MGP_WSBEiJ_P0028858 Ttc19 protein_coding protein_coding MGP_WSBEiJ_T0028859.1 MGP_WSBEiJ_G0017814.1 mouse_genomes_project 11 61638622 61656417 + Ttc19 protein_coding processed_transcript MGP_WSBEiJ_T0030402.1 MGP_WSBEiJ_G0018176.1 mouse_genomes_project 11 80963900 81278790 - MGP_WSBEiJ_P0030402 Myo1d protein_coding protein_coding MGP_WSBEiJ_T0030403.1 MGP_WSBEiJ_G0018176.1 mouse_genomes_project 11 81068310 81278790 - MGP_WSBEiJ_P0030403 Myo1d protein_coding protein_coding MGP_WSBEiJ_T0030404.1 MGP_WSBEiJ_G0018176.1 mouse_genomes_project 11 81168715 81278768 - Myo1d protein_coding retained_intron MGP_WSBEiJ_T0031510.1 MGP_WSBEiJ_G0018495.1 mouse_genomes_project 11 101912021 101916269 - MGP_WSBEiJ_P0031510 Krt13 protein_coding protein_coding MGP_WSBEiJ_T0031511.1 MGP_WSBEiJ_G0018495.1 mouse_genomes_project 11 101912595 101913537 - Krt13 protein_coding retained_intron MGP_WSBEiJ_T0031512.1 MGP_WSBEiJ_G0018495.1 mouse_genomes_project 11 101913847 101915280 - Krt13 protein_coding processed_transcript MGP_WSBEiJ_T0031571.1 MGP_WSBEiJ_G0018514.1 mouse_genomes_project 11 102404474 102411299 + MGP_WSBEiJ_P0031571 Cnp protein_coding protein_coding MGP_WSBEiJ_T0031572.1 MGP_WSBEiJ_G0018514.1 mouse_genomes_project 11 102404682 102406021 + Cnp protein_coding processed_transcript MGP_WSBEiJ_T0031573.1 MGP_WSBEiJ_G0018514.1 mouse_genomes_project 11 102405094 102411299 + Cnp protein_coding processed_transcript MGP_WSBEiJ_T0031574.1 MGP_WSBEiJ_G0018514.1 mouse_genomes_project 11 102405461 102421222 + Cnp protein_coding processed_transcript MGP_WSBEiJ_T0009614.1 MGP_WSBEiJ_G0007771.1 mouse_genomes_project 11 118063163 118063271 + Gm25837 miRNA miRNA MGP_WSBEiJ_T0009626.1 MGP_WSBEiJ_G0007783.1 mouse_genomes_project 11 123445506 123445644 + miRNA miRNA MGP_WSBEiJ_T0027354.1 MGP_WSBEiJ_G0017418.1 mouse_genomes_project 11 9067259 9126337 - MGP_WSBEiJ_P0027354 Grb10 protein_coding protein_coding MGP_WSBEiJ_T0027355.1 MGP_WSBEiJ_G0017418.1 mouse_genomes_project 11 9073456 9075355 - Grb10 protein_coding processed_transcript MGP_WSBEiJ_T0027356.1 MGP_WSBEiJ_G0017418.1 mouse_genomes_project 11 9081634 9083073 - Grb10 protein_coding processed_transcript MGP_WSBEiJ_T0027357.1 MGP_WSBEiJ_G0017418.1 mouse_genomes_project 11 9086342 9092767 - Grb10 protein_coding processed_transcript MGP_WSBEiJ_T0027358.1 MGP_WSBEiJ_G0017418.1 mouse_genomes_project 11 9091486 9180465 - MGP_WSBEiJ_P0027358 Grb10 protein_coding protein_coding MGP_WSBEiJ_T0027359.1 MGP_WSBEiJ_G0017418.1 mouse_genomes_project 11 9104222 9167628 - MGP_WSBEiJ_P0027359 Grb10 protein_coding protein_coding MGP_WSBEiJ_T0027360.1 MGP_WSBEiJ_G0017418.1 mouse_genomes_project 11 9104316 9168036 - MGP_WSBEiJ_P0027360 Grb10 protein_coding protein_coding MGP_WSBEiJ_T0032082.1 MGP_WSBEiJ_G0018614.1 mouse_genomes_project 11 105274787 105285059 - MGP_WSBEiJ_P0032082 Spata32 protein_coding protein_coding MGP_WSBEiJ_T0011602.1 MGP_WSBEiJ_G0009756.1 mouse_genomes_project 11 74287568 74288540 + MGP_WSBEiJ_P0011602 Olfr409-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0012322.1 MGP_WSBEiJ_G0010452.1 mouse_genomes_project 11 42677634 42678637 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031895.1 MGP_WSBEiJ_G0018581.1 mouse_genomes_project 11 104239119 104259290 + MGP_WSBEiJ_P0031895 BC030867 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031896.1 MGP_WSBEiJ_G0018581.1 mouse_genomes_project 11 104239119 104259290 + MGP_WSBEiJ_P0031896 BC030867 protein_coding protein_coding MGP_WSBEiJ_T0031897.1 MGP_WSBEiJ_G0018581.1 mouse_genomes_project 11 104248225 104253185 + BC030867 protein_coding processed_transcript MGP_WSBEiJ_T0031898.1 MGP_WSBEiJ_G0018581.1 mouse_genomes_project 11 104248229 104253183 + BC030867 protein_coding processed_transcript MGP_WSBEiJ_T0031899.1 MGP_WSBEiJ_G0018581.1 mouse_genomes_project 11 104254532 104259290 + BC030867 protein_coding processed_transcript MGP_WSBEiJ_T0003268.1 MGP_WSBEiJ_G0003020.1 mouse_genomes_project 11 118797997 118799121 + Recql5os1 antisense antisense MGP_WSBEiJ_T0012449.1 MGP_WSBEiJ_G0010579.1 mouse_genomes_project 11 96511725 96512134 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003159.1 MGP_WSBEiJ_G0002934.1 mouse_genomes_project 11 79406473 79415048 + Gm11201 antisense antisense MGP_WSBEiJ_T0003272.1 MGP_WSBEiJ_G0003024.1 mouse_genomes_project 11 119683596 119695842 + antisense antisense MGP_WSBEiJ_T0003273.1 MGP_WSBEiJ_G0003024.1 mouse_genomes_project 11 119683598 119687272 + antisense antisense MGP_WSBEiJ_T0003274.1 MGP_WSBEiJ_G0003024.1 mouse_genomes_project 11 119683778 119687272 + antisense antisense MGP_WSBEiJ_T0003275.1 MGP_WSBEiJ_G0003024.1 mouse_genomes_project 11 119684392 119687272 + antisense antisense MGP_WSBEiJ_T0012387.1 MGP_WSBEiJ_G0010517.1 mouse_genomes_project 11 69496214 69496804 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030609.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85734087 85893284 - MGP_WSBEiJ_P0030609 Usp32 protein_coding protein_coding MGP_WSBEiJ_T0030610.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85735292 85780615 - MGP_WSBEiJ_P0030610 Usp32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030611.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85735915 85738482 - MGP_WSBEiJ_P0030611 Usp32 protein_coding protein_coding MGP_WSBEiJ_T0030612.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85778639 85792346 - MGP_WSBEiJ_P0030612 Usp32 protein_coding protein_coding MGP_WSBEiJ_T0030613.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85787926 85795619 - MGP_WSBEiJ_P0030613 Usp32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030614.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85800424 85803362 - Usp32 protein_coding retained_intron MGP_WSBEiJ_T0030615.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85831216 85893407 - Usp32 protein_coding processed_transcript MGP_WSBEiJ_T0030616.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85850096 85893214 - Usp32 protein_coding processed_transcript MGP_WSBEiJ_T0030617.1 MGP_WSBEiJ_G0018238.1 mouse_genomes_project 11 85854042 85893175 - Usp32 protein_coding retained_intron MGP_WSBEiJ_T0098919.1 MGP_WSBEiJ_G0037582.1 mouse_genomes_project 11 54360446 54360586 + Gm22884 snoRNA snoRNA MGP_WSBEiJ_T0027883.1 MGP_WSBEiJ_G0017547.1 mouse_genomes_project 11 42589396 42603344 + MGP_WSBEiJ_P0027883 Il12b protein_coding protein_coding MGP_WSBEiJ_T0027884.1 MGP_WSBEiJ_G0017547.1 mouse_genomes_project 11 42589396 42603367 + MGP_WSBEiJ_P0027884 Il12b protein_coding protein_coding MGP_WSBEiJ_T0097702.1 MGP_WSBEiJ_G0036365.1 mouse_genomes_project 11 68673540 68673624 + Gm25819 snRNA snRNA MGP_WSBEiJ_T0027311.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6188069 6209081 + MGP_WSBEiJ_P0027311 Upp1 protein_coding protein_coding MGP_WSBEiJ_T0027312.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6188073 6209087 + MGP_WSBEiJ_P0027312 Upp1 protein_coding protein_coding MGP_WSBEiJ_T0027313.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6188211 6207646 + MGP_WSBEiJ_P0027313 Upp1 protein_coding protein_coding MGP_WSBEiJ_T0027314.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6188473 6209084 + MGP_WSBEiJ_P0027314 Upp1 protein_coding protein_coding MGP_WSBEiJ_T0027315.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6188514 6206237 + MGP_WSBEiJ_P0027315 Upp1 protein_coding protein_coding MGP_WSBEiJ_T0027316.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6188593 6189641 + Upp1 protein_coding retained_intron MGP_WSBEiJ_T0027317.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6188753 6206166 + MGP_WSBEiJ_P0027317 Upp1 protein_coding protein_coding MGP_WSBEiJ_T0027318.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6197667 6207666 + MGP_WSBEiJ_P0027318 Upp1 protein_coding protein_coding MGP_WSBEiJ_T0027319.1 MGP_WSBEiJ_G0017410.1 mouse_genomes_project 11 6205929 6208999 + Upp1 protein_coding retained_intron MGP_WSBEiJ_T0028539.1 MGP_WSBEiJ_G0017744.1 mouse_genomes_project 11 58080969 58081583 + MGP_WSBEiJ_P0028539 Hist3h2ba protein_coding protein_coding MGP_WSBEiJ_T0030498.1 MGP_WSBEiJ_G0018209.1 mouse_genomes_project 11 84111728 84134054 - MGP_WSBEiJ_P0030498 Mmp28 protein_coding protein_coding MGP_WSBEiJ_T0030499.1 MGP_WSBEiJ_G0018209.1 mouse_genomes_project 11 84112834 84133993 - MGP_WSBEiJ_P0030499 Mmp28 protein_coding protein_coding MGP_WSBEiJ_T0030500.1 MGP_WSBEiJ_G0018209.1 mouse_genomes_project 11 84112834 84134103 - MGP_WSBEiJ_P0030500 Mmp28 protein_coding protein_coding MGP_WSBEiJ_T0030501.1 MGP_WSBEiJ_G0018209.1 mouse_genomes_project 11 84114022 84134024 - MGP_WSBEiJ_P0030501 Mmp28 protein_coding protein_coding MGP_WSBEiJ_T0030502.1 MGP_WSBEiJ_G0018209.1 mouse_genomes_project 11 84122364 84134103 - Mmp28 protein_coding processed_transcript MGP_WSBEiJ_T0012442.1 MGP_WSBEiJ_G0010572.1 mouse_genomes_project 11 91929278 91930860 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012473.1 MGP_WSBEiJ_G0010603.1 mouse_genomes_project 11 105689308 105690172 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0029155.1 MGP_WSBEiJ_G0017882.1 mouse_genomes_project 11 68801414 68805054 + MGP_WSBEiJ_P0029155 Hes7 protein_coding protein_coding MGP_WSBEiJ_T0027870.1 MGP_WSBEiJ_G0017543.1 mouse_genomes_project 11 41747505 41756789 - MGP_WSBEiJ_P0027870 Fabp6 protein_coding protein_coding MGP_WSBEiJ_T0009567.1 MGP_WSBEiJ_G0007724.1 mouse_genomes_project 11 75712130 75712213 + Mir3971 miRNA miRNA MGP_WSBEiJ_T0028283.1 MGP_WSBEiJ_G0017660.1 mouse_genomes_project 11 52211267 52212197 + MGP_WSBEiJ_P0028283 Gm9945 protein_coding protein_coding MGP_WSBEiJ_T0028099.1 MGP_WSBEiJ_G0017614.1 mouse_genomes_project 11 48888550 48893796 + MGP_WSBEiJ_P0028099 Cby3 protein_coding protein_coding MGP_WSBEiJ_T0028100.1 MGP_WSBEiJ_G0017614.1 mouse_genomes_project 11 48891857 48893796 + MGP_WSBEiJ_P0028100 Cby3 protein_coding protein_coding MGP_WSBEiJ_T0029875.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75022878 75044686 - MGP_WSBEiJ_P0029875 Srr protein_coding protein_coding MGP_WSBEiJ_T0029876.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75023028 75044563 - Srr protein_coding processed_transcript MGP_WSBEiJ_T0029877.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75023311 75044661 - MGP_WSBEiJ_P0029877 Srr protein_coding protein_coding MGP_WSBEiJ_T0029878.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75023317 75044836 - MGP_WSBEiJ_P0029878 Srr protein_coding protein_coding MGP_WSBEiJ_T0029879.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75023337 75044661 - MGP_WSBEiJ_P0029879 Srr protein_coding protein_coding MGP_WSBEiJ_T0029880.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75028057 75044570 - MGP_WSBEiJ_P0029880 Srr protein_coding protein_coding MGP_WSBEiJ_T0029881.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75028538 75044548 - MGP_WSBEiJ_P0029881 Srr protein_coding protein_coding MGP_WSBEiJ_T0029882.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75028683 75044591 - Srr protein_coding retained_intron MGP_WSBEiJ_T0029883.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75028768 75044563 - Srr protein_coding retained_intron MGP_WSBEiJ_T0029884.1 MGP_WSBEiJ_G0018062.1 mouse_genomes_project 11 75029414 75044546 - MGP_WSBEiJ_P0029884 Srr protein_coding protein_coding MGP_WSBEiJ_T0027697.1 MGP_WSBEiJ_G0017497.1 mouse_genomes_project 11 29945204 29948783 + MGP_WSBEiJ_P0027697 Snrnp25 protein_coding protein_coding MGP_WSBEiJ_T0027698.1 MGP_WSBEiJ_G0017497.1 mouse_genomes_project 11 29945235 29948207 + MGP_WSBEiJ_P0027698 Snrnp25 protein_coding protein_coding MGP_WSBEiJ_T0027699.1 MGP_WSBEiJ_G0017497.1 mouse_genomes_project 11 29945247 29947450 + Snrnp25 protein_coding processed_transcript MGP_WSBEiJ_T0027700.1 MGP_WSBEiJ_G0017497.1 mouse_genomes_project 11 29945277 29948672 + MGP_WSBEiJ_P0027700 Snrnp25 protein_coding protein_coding MGP_WSBEiJ_T0027701.1 MGP_WSBEiJ_G0017497.1 mouse_genomes_project 11 29946560 29948783 + Snrnp25 protein_coding retained_intron MGP_WSBEiJ_T0009566.1 MGP_WSBEiJ_G0007723.1 mouse_genomes_project 11 75615403 75615498 + Mir22 miRNA miRNA MGP_WSBEiJ_T0028153.1 MGP_WSBEiJ_G0017626.1 mouse_genomes_project 11 49580767 49581709 + MGP_WSBEiJ_P0028153 Olfr54 protein_coding protein_coding MGP_WSBEiJ_T0009539.1 MGP_WSBEiJ_G0007696.1 mouse_genomes_project 11 59533796 59533914 - Gm27711 miRNA miRNA MGP_WSBEiJ_T0029453.1 MGP_WSBEiJ_G0017948.1 mouse_genomes_project 11 70021695 70027128 - MGP_WSBEiJ_P0029453 protein_coding unknown_likely_coding MGP_WSBEiJ_T0029454.1 MGP_WSBEiJ_G0017948.1 mouse_genomes_project 11 70026110 70027248 - MGP_WSBEiJ_P0029454 protein_coding protein_coding MGP_WSBEiJ_T0029455.1 MGP_WSBEiJ_G0017948.1 mouse_genomes_project 11 70026179 70027369 - protein_coding retained_intron MGP_WSBEiJ_T0003142.1 MGP_WSBEiJ_G0002919.1 mouse_genomes_project 11 68212012 68215773 - Ccdc42os antisense antisense MGP_WSBEiJ_T0027183.1 MGP_WSBEiJ_G0017378.1 mouse_genomes_project 11 2788662 2798592 - MGP_WSBEiJ_P0027183 Polm protein_coding protein_coding MGP_WSBEiJ_T0027184.1 MGP_WSBEiJ_G0017378.1 mouse_genomes_project 11 2788663 2798819 - MGP_WSBEiJ_P0027184 Polm protein_coding protein_coding MGP_WSBEiJ_T0027185.1 MGP_WSBEiJ_G0017378.1 mouse_genomes_project 11 2790017 2791003 - Polm protein_coding processed_transcript MGP_WSBEiJ_T0027186.1 MGP_WSBEiJ_G0017378.1 mouse_genomes_project 11 2795596 2797289 - Polm protein_coding processed_transcript MGP_WSBEiJ_T0027187.1 MGP_WSBEiJ_G0017378.1 mouse_genomes_project 11 2797081 2798555 - Polm protein_coding processed_transcript MGP_WSBEiJ_T0027188.1 MGP_WSBEiJ_G0017378.1 mouse_genomes_project 11 2797104 2798596 - Polm protein_coding processed_transcript MGP_WSBEiJ_T0032343.1 MGP_WSBEiJ_G0018675.1 mouse_genomes_project 11 109795850 109815693 + MGP_WSBEiJ_P0032343 Psmd12 protein_coding protein_coding MGP_WSBEiJ_T0032344.1 MGP_WSBEiJ_G0018675.1 mouse_genomes_project 11 109795894 109823226 + MGP_WSBEiJ_P0032344 Psmd12 protein_coding protein_coding MGP_WSBEiJ_T0032345.1 MGP_WSBEiJ_G0018675.1 mouse_genomes_project 11 109795943 109815252 + MGP_WSBEiJ_P0032345 Psmd12 protein_coding protein_coding MGP_WSBEiJ_T0003133.1 MGP_WSBEiJ_G0002913.1 mouse_genomes_project 11 63522669 63526444 + 2810001G20Rik antisense antisense MGP_WSBEiJ_T0003134.1 MGP_WSBEiJ_G0002913.1 mouse_genomes_project 11 63522767 63526444 + 2810001G20Rik antisense antisense MGP_WSBEiJ_T0030474.1 MGP_WSBEiJ_G0018202.1 mouse_genomes_project 11 83853802 83878886 + MGP_WSBEiJ_P0030474 protein_coding protein_coding MGP_WSBEiJ_T0027293.1 MGP_WSBEiJ_G0017404.1 mouse_genomes_project 11 4241108 4248916 - MGP_WSBEiJ_P0027293 Igfbp3 protein_coding protein_coding MGP_WSBEiJ_T0027294.1 MGP_WSBEiJ_G0017404.1 mouse_genomes_project 11 4242707 4248942 - MGP_WSBEiJ_P0027294 Igfbp3 protein_coding protein_coding MGP_WSBEiJ_T0009523.1 MGP_WSBEiJ_G0007680.1 mouse_genomes_project 11 44454747 44454804 + Mir7239 miRNA miRNA MGP_WSBEiJ_T0006225.1 MGP_WSBEiJ_G0005194.1 mouse_genomes_project 11 91871528 91969338 + 4930405D11Rik lincRNA lincRNA MGP_WSBEiJ_T0006226.1 MGP_WSBEiJ_G0005194.1 mouse_genomes_project 11 91954049 91969282 + 4930405D11Rik lincRNA lincRNA MGP_WSBEiJ_T0006227.1 MGP_WSBEiJ_G0005194.1 mouse_genomes_project 11 91954074 91969188 + 4930405D11Rik lincRNA lincRNA MGP_WSBEiJ_T0012242.1 MGP_WSBEiJ_G0010372.1 mouse_genomes_project 11 14489805 14490648 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003227.1 MGP_WSBEiJ_G0002985.1 mouse_genomes_project 11 103846906 103851872 + Gm11551 antisense antisense MGP_WSBEiJ_T0028385.1 MGP_WSBEiJ_G0017682.1 mouse_genomes_project 11 53535134 53612970 - MGP_WSBEiJ_P0028385 Cdc42se2 protein_coding protein_coding MGP_WSBEiJ_T0028386.1 MGP_WSBEiJ_G0017682.1 mouse_genomes_project 11 53542935 53612941 - MGP_WSBEiJ_P0028386 Cdc42se2 protein_coding protein_coding MGP_WSBEiJ_T0028387.1 MGP_WSBEiJ_G0017682.1 mouse_genomes_project 11 53561764 53612936 - Cdc42se2 protein_coding processed_transcript MGP_WSBEiJ_T0028388.1 MGP_WSBEiJ_G0017682.1 mouse_genomes_project 11 53562088 53612920 - Cdc42se2 protein_coding processed_transcript MGP_WSBEiJ_T0028389.1 MGP_WSBEiJ_G0017682.1 mouse_genomes_project 11 53562241 53585438 - Cdc42se2 protein_coding processed_transcript MGP_WSBEiJ_T0016556.1 MGP_WSBEiJ_G0014568.1 mouse_genomes_project 11 3521677 3524614 - Snhg15 processed_transcript processed_transcript MGP_WSBEiJ_T0016557.1 MGP_WSBEiJ_G0014568.1 mouse_genomes_project 11 3521678 3522817 - Snhg15 processed_transcript processed_transcript MGP_WSBEiJ_T0016558.1 MGP_WSBEiJ_G0014568.1 mouse_genomes_project 11 3521711 3524295 - Snhg15 processed_transcript processed_transcript MGP_WSBEiJ_T0016559.1 MGP_WSBEiJ_G0014568.1 mouse_genomes_project 11 3523752 3524600 - Snhg15 processed_transcript processed_transcript MGP_WSBEiJ_T0028522.1 MGP_WSBEiJ_G0017735.1 mouse_genomes_project 11 57752363 57772833 + MGP_WSBEiJ_P0028522 protein_coding protein_coding MGP_WSBEiJ_T0032646.1 MGP_WSBEiJ_G0018747.1 mouse_genomes_project 11 118324992 118344371 - MGP_WSBEiJ_P0032646 Hn1 protein_coding protein_coding MGP_WSBEiJ_T0032647.1 MGP_WSBEiJ_G0018747.1 mouse_genomes_project 11 118326166 118344132 - Hn1 protein_coding processed_transcript MGP_WSBEiJ_T0032648.1 MGP_WSBEiJ_G0018747.1 mouse_genomes_project 11 118326265 118344332 - Hn1 protein_coding processed_transcript MGP_WSBEiJ_T0032649.1 MGP_WSBEiJ_G0018747.1 mouse_genomes_project 11 118328516 118344355 - Hn1 protein_coding processed_transcript MGP_WSBEiJ_T0032650.1 MGP_WSBEiJ_G0018747.1 mouse_genomes_project 11 118331147 118344100 - Hn1 protein_coding processed_transcript MGP_WSBEiJ_T0006208.1 MGP_WSBEiJ_G0005181.1 mouse_genomes_project 11 85449277 85452716 - 1700109G15Rik lincRNA lincRNA MGP_WSBEiJ_T0028038.1 MGP_WSBEiJ_G0017599.1 mouse_genomes_project 11 47976233 47977035 + MGP_WSBEiJ_P0028038 Olfr1383 protein_coding protein_coding MGP_WSBEiJ_T0003215.1 MGP_WSBEiJ_G0002976.1 mouse_genomes_project 11 101123710 101124259 + Gm11940 antisense antisense MGP_WSBEiJ_T0027553.1 MGP_WSBEiJ_G0017464.1 mouse_genomes_project 11 21466534 21493597 - MGP_WSBEiJ_P0027553 A830031A19Rik protein_coding protein_coding MGP_WSBEiJ_T0012264.1 MGP_WSBEiJ_G0010394.1 mouse_genomes_project 11 19204093 19205038 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096917.1 MGP_WSBEiJ_G0035598.1 mouse_genomes_project 11 86557849 86557965 + Gm23473 rRNA rRNA MGP_WSBEiJ_T0027389.1 MGP_WSBEiJ_G0017425.1 mouse_genomes_project 11 14230425 14233835 + MGP_WSBEiJ_P0027389 Cnrip1 protein_coding protein_coding MGP_WSBEiJ_T0027390.1 MGP_WSBEiJ_G0017425.1 mouse_genomes_project 11 14230642 14233073 + Cnrip1 protein_coding retained_intron MGP_WSBEiJ_T0027391.1 MGP_WSBEiJ_G0017425.1 mouse_genomes_project 11 14230657 14262036 + MGP_WSBEiJ_P0027391 Cnrip1 protein_coding protein_coding MGP_WSBEiJ_T0016642.1 MGP_WSBEiJ_G0014614.1 mouse_genomes_project 11 98313692 98325926 - Gm11523 processed_transcript lincRNA MGP_WSBEiJ_T0016643.1 MGP_WSBEiJ_G0014614.1 mouse_genomes_project 11 98313985 98325932 - Gm11523 processed_transcript lincRNA MGP_WSBEiJ_T0016644.1 MGP_WSBEiJ_G0014614.1 mouse_genomes_project 11 98314114 98325912 - Gm11523 processed_transcript antisense MGP_WSBEiJ_T0029583.1 MGP_WSBEiJ_G0017975.1 mouse_genomes_project 11 70520214 70533162 - MGP_WSBEiJ_P0029583 Inca1 protein_coding protein_coding MGP_WSBEiJ_T0029584.1 MGP_WSBEiJ_G0017975.1 mouse_genomes_project 11 70520214 70533162 - MGP_WSBEiJ_P0029584 Inca1 protein_coding protein_coding MGP_WSBEiJ_T0029585.1 MGP_WSBEiJ_G0017975.1 mouse_genomes_project 11 70520214 70533162 - MGP_WSBEiJ_P0029585 Inca1 protein_coding protein_coding MGP_WSBEiJ_T0029586.1 MGP_WSBEiJ_G0017975.1 mouse_genomes_project 11 70520214 70533162 - MGP_WSBEiJ_P0029586 Inca1 protein_coding protein_coding MGP_WSBEiJ_T0029587.1 MGP_WSBEiJ_G0017975.1 mouse_genomes_project 11 70520222 70533116 - MGP_WSBEiJ_P0029587 Inca1 protein_coding protein_coding MGP_WSBEiJ_T0006187.1 MGP_WSBEiJ_G0005168.1 mouse_genomes_project 11 75923505 75939403 - Gm26836 lincRNA lincRNA MGP_WSBEiJ_T0016552.1 MGP_WSBEiJ_G0014566.1 mouse_genomes_project 11 358451 359121 + Gm11947 processed_transcript processed_transcript MGP_WSBEiJ_T0029301.1 MGP_WSBEiJ_G0017917.1 mouse_genomes_project 11 69566724 69572325 - MGP_WSBEiJ_P0029301 Fgf11 protein_coding protein_coding MGP_WSBEiJ_T0029302.1 MGP_WSBEiJ_G0017917.1 mouse_genomes_project 11 69566729 69572466 - MGP_WSBEiJ_P0029302 Fgf11 protein_coding protein_coding MGP_WSBEiJ_T0027403.1 MGP_WSBEiJ_G0017430.1 mouse_genomes_project 11 15142618 15165200 - MGP_WSBEiJ_P0027403 Etaa1 protein_coding protein_coding MGP_WSBEiJ_T0031525.1 MGP_WSBEiJ_G0018503.1 mouse_genomes_project 11 102140196 102142809 + MGP_WSBEiJ_P0031525 Eif1 protein_coding protein_coding MGP_WSBEiJ_T0098893.1 MGP_WSBEiJ_G0037556.1 mouse_genomes_project 11 3523886 3524019 - Snora9 snoRNA snoRNA MGP_WSBEiJ_T0033147.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122746542 122970533 + Rptor protein_coding retained_intron MGP_WSBEiJ_T0033148.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122746632 122928681 + Rptor protein_coding retained_intron MGP_WSBEiJ_T0033149.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122746652 122992409 + Rptor protein_coding retained_intron MGP_WSBEiJ_T0033150.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122746786 123049173 + MGP_WSBEiJ_P0033150 Rptor protein_coding protein_coding MGP_WSBEiJ_T0033151.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122747335 123049342 + MGP_WSBEiJ_P0033151 Rptor protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033152.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122800892 123013779 + Rptor protein_coding retained_intron MGP_WSBEiJ_T0033153.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122945187 122994317 + MGP_WSBEiJ_P0033153 Rptor protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033154.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122957653 123016431 + Rptor protein_coding retained_intron MGP_WSBEiJ_T0033155.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 122970303 123003527 + MGP_WSBEiJ_P0033155 Rptor protein_coding protein_coding MGP_WSBEiJ_T0033156.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 123003487 123045919 + MGP_WSBEiJ_P0033156 Rptor protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033157.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 123003537 123005031 + Rptor protein_coding retained_intron MGP_WSBEiJ_T0033158.1 MGP_WSBEiJ_G0018840.1 mouse_genomes_project 11 123004672 123033697 + MGP_WSBEiJ_P0033158 Rptor protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006254.1 MGP_WSBEiJ_G0005215.1 mouse_genomes_project 11 112270841 112273443 + 1700023C21Rik lincRNA lincRNA MGP_WSBEiJ_T0097719.1 MGP_WSBEiJ_G0036382.1 mouse_genomes_project 11 86260021 86260168 + Gm23765 snRNA snRNA MGP_WSBEiJ_T0028150.1 MGP_WSBEiJ_G0017625.1 mouse_genomes_project 11 49505958 49508908 - MGP_WSBEiJ_P0028150 Prop1 protein_coding protein_coding MGP_WSBEiJ_T0028151.1 MGP_WSBEiJ_G0017625.1 mouse_genomes_project 11 49506344 49507607 - Prop1 protein_coding retained_intron MGP_WSBEiJ_T0028152.1 MGP_WSBEiJ_G0017625.1 mouse_genomes_project 11 49507366 49508894 - MGP_WSBEiJ_P0028152 Prop1 protein_coding protein_coding MGP_WSBEiJ_T0030549.1 MGP_WSBEiJ_G0018226.1 mouse_genomes_project 11 84779445 84831931 - MGP_WSBEiJ_P0030549 Tada2a protein_coding protein_coding MGP_WSBEiJ_T0030550.1 MGP_WSBEiJ_G0018226.1 mouse_genomes_project 11 84780056 84783482 - Tada2a protein_coding processed_transcript MGP_WSBEiJ_T0030551.1 MGP_WSBEiJ_G0018226.1 mouse_genomes_project 11 84780161 84794985 - MGP_WSBEiJ_P0030551 Tada2a protein_coding protein_coding MGP_WSBEiJ_T0030552.1 MGP_WSBEiJ_G0018226.1 mouse_genomes_project 11 84782563 84787980 - Tada2a protein_coding processed_transcript MGP_WSBEiJ_T0030553.1 MGP_WSBEiJ_G0018226.1 mouse_genomes_project 11 84785950 84788032 - Tada2a protein_coding processed_transcript MGP_WSBEiJ_T0030762.1 MGP_WSBEiJ_G0018272.1 mouse_genomes_project 11 88684107 88695588 + MGP_WSBEiJ_P0030762 Mpo protein_coding protein_coding MGP_WSBEiJ_T0030763.1 MGP_WSBEiJ_G0018272.1 mouse_genomes_project 11 88684322 88686534 + MGP_WSBEiJ_P0030763 Mpo protein_coding protein_coding MGP_WSBEiJ_T0030764.1 MGP_WSBEiJ_G0018272.1 mouse_genomes_project 11 88684736 88695588 + MGP_WSBEiJ_P0030764 Mpo protein_coding protein_coding MGP_WSBEiJ_T0030765.1 MGP_WSBEiJ_G0018272.1 mouse_genomes_project 11 88685685 88690345 + MGP_WSBEiJ_P0030765 Mpo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030766.1 MGP_WSBEiJ_G0018272.1 mouse_genomes_project 11 88693716 88695000 + MGP_WSBEiJ_P0030766 Mpo protein_coding protein_coding MGP_WSBEiJ_T0030767.1 MGP_WSBEiJ_G0018272.1 mouse_genomes_project 11 88694291 88695548 + Mpo protein_coding retained_intron MGP_WSBEiJ_T0031605.1 MGP_WSBEiJ_G0018520.1 mouse_genomes_project 11 102549416 102550142 + MGP_WSBEiJ_P0031605 Hspb9 protein_coding protein_coding MGP_WSBEiJ_T0031606.1 MGP_WSBEiJ_G0018520.1 mouse_genomes_project 11 102549488 102550140 + MGP_WSBEiJ_P0031606 Hspb9 protein_coding protein_coding MGP_WSBEiJ_T0033019.1 MGP_WSBEiJ_G0018811.1 mouse_genomes_project 11 120889963 120896448 + MGP_WSBEiJ_P0033019 Birc5 protein_coding protein_coding MGP_WSBEiJ_T0033020.1 MGP_WSBEiJ_G0018811.1 mouse_genomes_project 11 120890031 120896459 + MGP_WSBEiJ_P0033020 Birc5 protein_coding protein_coding MGP_WSBEiJ_T0098951.1 MGP_WSBEiJ_G0037614.1 mouse_genomes_project 11 100371265 100371369 - Gm22059 snoRNA snoRNA MGP_WSBEiJ_T0012386.1 MGP_WSBEiJ_G0010516.1 mouse_genomes_project 11 69387007 69387189 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0028310.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521140 52530454 + MGP_WSBEiJ_P0028310 Irf1 protein_coding protein_coding MGP_WSBEiJ_T0028311.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521174 52528234 + MGP_WSBEiJ_P0028311 Irf1 protein_coding protein_coding MGP_WSBEiJ_T0028312.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521177 52531505 + MGP_WSBEiJ_P0028312 Irf1 protein_coding protein_coding MGP_WSBEiJ_T0028313.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521197 52529509 + Irf1 protein_coding processed_transcript MGP_WSBEiJ_T0028314.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521231 52527216 + MGP_WSBEiJ_P0028314 Irf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028315.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521597 52526069 + MGP_WSBEiJ_P0028315 Irf1 protein_coding protein_coding MGP_WSBEiJ_T0028316.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521607 52527325 + MGP_WSBEiJ_P0028316 Irf1 protein_coding protein_coding MGP_WSBEiJ_T0028317.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521615 52530454 + MGP_WSBEiJ_P0028317 Irf1 protein_coding protein_coding MGP_WSBEiJ_T0028318.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52521629 52527088 + MGP_WSBEiJ_P0028318 Irf1 protein_coding protein_coding MGP_WSBEiJ_T0028320.1 MGP_WSBEiJ_G0017667.1 mouse_genomes_project 11 52526283 52527261 + Irf1 protein_coding retained_intron MGP_WSBEiJ_T0030564.1 MGP_WSBEiJ_G0018229.1 mouse_genomes_project 11 85138722 85241008 - MGP_WSBEiJ_P0030564 Aatf protein_coding protein_coding MGP_WSBEiJ_T0030565.1 MGP_WSBEiJ_G0018229.1 mouse_genomes_project 11 85138750 85212810 - Aatf protein_coding processed_transcript MGP_WSBEiJ_T0030566.1 MGP_WSBEiJ_G0018229.1 mouse_genomes_project 11 85160111 85167170 - Aatf protein_coding retained_intron MGP_WSBEiJ_T0030567.1 MGP_WSBEiJ_G0018229.1 mouse_genomes_project 11 85186453 85241008 - Aatf protein_coding retained_intron MGP_WSBEiJ_T0030360.1 MGP_WSBEiJ_G0018169.1 mouse_genomes_project 11 80637812 80654439 + MGP_WSBEiJ_P0030360 Rnf135 protein_coding protein_coding MGP_WSBEiJ_T0030361.1 MGP_WSBEiJ_G0018169.1 mouse_genomes_project 11 80638184 80643372 + Rnf135 protein_coding processed_transcript MGP_WSBEiJ_T0028961.1 MGP_WSBEiJ_G0017838.1 mouse_genomes_project 11 64655134 64749712 - MGP_WSBEiJ_P0028961 Myocd protein_coding protein_coding MGP_WSBEiJ_T0028962.1 MGP_WSBEiJ_G0017838.1 mouse_genomes_project 11 64655143 64749760 - MGP_WSBEiJ_P0028962 Myocd protein_coding protein_coding MGP_WSBEiJ_T0028963.1 MGP_WSBEiJ_G0017838.1 mouse_genomes_project 11 64655338 64660747 - Myocd protein_coding processed_transcript MGP_WSBEiJ_T0028964.1 MGP_WSBEiJ_G0017838.1 mouse_genomes_project 11 64657011 64698421 - MGP_WSBEiJ_P0028964 Myocd protein_coding protein_coding MGP_WSBEiJ_T0028965.1 MGP_WSBEiJ_G0017838.1 mouse_genomes_project 11 64674666 64685376 - MGP_WSBEiJ_P0028965 Myocd protein_coding protein_coding MGP_WSBEiJ_T0028966.1 MGP_WSBEiJ_G0017838.1 mouse_genomes_project 11 64703596 64749625 - Myocd protein_coding processed_transcript MGP_WSBEiJ_T0032496.1 MGP_WSBEiJ_G0018711.1 mouse_genomes_project 11 116421384 116447940 - MGP_WSBEiJ_P0032496 Cdc42ep4 protein_coding protein_coding MGP_WSBEiJ_T0032497.1 MGP_WSBEiJ_G0018711.1 mouse_genomes_project 11 116421386 116448503 - MGP_WSBEiJ_P0032497 Cdc42ep4 protein_coding protein_coding MGP_WSBEiJ_T0032498.1 MGP_WSBEiJ_G0018711.1 mouse_genomes_project 11 116423517 116433855 - MGP_WSBEiJ_P0032498 Cdc42ep4 protein_coding protein_coding MGP_WSBEiJ_T0032499.1 MGP_WSBEiJ_G0018711.1 mouse_genomes_project 11 116423839 116447776 - MGP_WSBEiJ_P0032499 Cdc42ep4 protein_coding protein_coding MGP_WSBEiJ_T0032366.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110779565 111216065 + MGP_WSBEiJ_P0032366 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032367.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110779639 111216064 + MGP_WSBEiJ_P0032367 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032368.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110779650 110829179 + Cep112 protein_coding retained_intron MGP_WSBEiJ_T0032369.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110779664 110794900 + MGP_WSBEiJ_P0032369 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032370.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110779838 110885518 + MGP_WSBEiJ_P0032370 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032371.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110779881 111216065 + MGP_WSBEiJ_P0032371 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032372.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110779989 111215709 + MGP_WSBEiJ_P0032372 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032373.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110855507 111215800 + MGP_WSBEiJ_P0032373 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032374.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110885508 110923298 + Cep112 protein_coding retained_intron MGP_WSBEiJ_T0032375.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110936609 111116102 + MGP_WSBEiJ_P0032375 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032376.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110958191 111019497 + Cep112 protein_coding processed_transcript MGP_WSBEiJ_T0032377.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110993769 111215703 + Cep112 protein_coding processed_transcript MGP_WSBEiJ_T0032378.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 110997654 111211310 + Cep112 protein_coding processed_transcript MGP_WSBEiJ_T0032379.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 111038850 111215799 + MGP_WSBEiJ_P0032379 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032380.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 111038857 111216065 + MGP_WSBEiJ_P0032380 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032381.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 111038866 111215804 + MGP_WSBEiJ_P0032381 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0032383.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 111068936 111166031 + Cep112 protein_coding processed_transcript MGP_WSBEiJ_T0032384.1 MGP_WSBEiJ_G0018682.1 mouse_genomes_project 11 111110576 111214812 + MGP_WSBEiJ_P0032384 Cep112 protein_coding protein_coding MGP_WSBEiJ_T0028471.1 MGP_WSBEiJ_G0017708.1 mouse_genomes_project 11 57160167 57168082 + MGP_WSBEiJ_P0028471 Mrpl22 protein_coding protein_coding MGP_WSBEiJ_T0028472.1 MGP_WSBEiJ_G0017708.1 mouse_genomes_project 11 57160191 57164712 + Mrpl22 protein_coding processed_transcript MGP_WSBEiJ_T0028473.1 MGP_WSBEiJ_G0017708.1 mouse_genomes_project 11 57160204 57165790 + Mrpl22 protein_coding processed_transcript MGP_WSBEiJ_T0097727.1 MGP_WSBEiJ_G0036390.1 mouse_genomes_project 11 94570286 94570393 - Gm24856 snRNA snRNA MGP_WSBEiJ_T0016663.1 MGP_WSBEiJ_G0014628.1 mouse_genomes_project 11 105818664 105819247 + Gm11642 processed_transcript processed_transcript MGP_WSBEiJ_T0030521.1 MGP_WSBEiJ_G0018219.1 mouse_genomes_project 11 84393757 84396091 + MGP_WSBEiJ_P0030521 Wfdc18 protein_coding protein_coding MGP_WSBEiJ_T0030522.1 MGP_WSBEiJ_G0018219.1 mouse_genomes_project 11 84393865 84396082 + MGP_WSBEiJ_P0030522 Wfdc18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030523.1 MGP_WSBEiJ_G0018219.1 mouse_genomes_project 11 84393867 84395441 + Wfdc18 protein_coding retained_intron MGP_WSBEiJ_T0016560.1 MGP_WSBEiJ_G0014569.1 mouse_genomes_project 11 3738847 3742904 - Gm11981 processed_transcript processed_transcript MGP_WSBEiJ_T0006211.1 MGP_WSBEiJ_G0005184.1 mouse_genomes_project 11 88644179 88645868 + Mir142hg lincRNA lincRNA MGP_WSBEiJ_T0012294.1 MGP_WSBEiJ_G0010424.1 mouse_genomes_project 11 28614514 28615491 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003224.1 MGP_WSBEiJ_G0002982.1 mouse_genomes_project 11 103235489 103245031 - Gm28156 antisense antisense MGP_WSBEiJ_T0016614.1 MGP_WSBEiJ_G0014599.1 mouse_genomes_project 11 72235171 72237329 + 1700051A21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016615.1 MGP_WSBEiJ_G0014599.1 mouse_genomes_project 11 72235594 72237311 + 1700051A21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0003103.1 MGP_WSBEiJ_G0002888.1 mouse_genomes_project 11 57113698 57116182 + Gm12246 antisense antisense MGP_WSBEiJ_T0012388.1 MGP_WSBEiJ_G0010518.1 mouse_genomes_project 11 69731886 69732378 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027684.1 MGP_WSBEiJ_G0017492.1 mouse_genomes_project 11 29575212 29635919 + MGP_WSBEiJ_P0027684 Cpeb4 protein_coding protein_coding MGP_WSBEiJ_T0027685.1 MGP_WSBEiJ_G0017492.1 mouse_genomes_project 11 29575227 29640353 + MGP_WSBEiJ_P0027685 Cpeb4 protein_coding protein_coding MGP_WSBEiJ_T0027686.1 MGP_WSBEiJ_G0017492.1 mouse_genomes_project 11 29576277 29640353 + MGP_WSBEiJ_P0027686 Cpeb4 protein_coding protein_coding MGP_WSBEiJ_T0027740.1 MGP_WSBEiJ_G0017506.1 mouse_genomes_project 11 30414444 30523237 + MGP_WSBEiJ_P0027740 Fbxw11 protein_coding protein_coding MGP_WSBEiJ_T0027741.1 MGP_WSBEiJ_G0017506.1 mouse_genomes_project 11 30414504 30426191 + Fbxw11 protein_coding processed_transcript MGP_WSBEiJ_T0027742.1 MGP_WSBEiJ_G0017506.1 mouse_genomes_project 11 30414586 30523457 + MGP_WSBEiJ_P0027742 Fbxw11 protein_coding protein_coding MGP_WSBEiJ_T0027743.1 MGP_WSBEiJ_G0017506.1 mouse_genomes_project 11 30414595 30523484 + MGP_WSBEiJ_P0027743 Fbxw11 protein_coding protein_coding MGP_WSBEiJ_T0027744.1 MGP_WSBEiJ_G0017506.1 mouse_genomes_project 11 30414624 30498594 + MGP_WSBEiJ_P0027744 Fbxw11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0029353.1 MGP_WSBEiJ_G0017930.1 mouse_genomes_project 11 69690890 69693580 + MGP_WSBEiJ_P0029353 Gps2 protein_coding protein_coding MGP_WSBEiJ_T0029354.1 MGP_WSBEiJ_G0017930.1 mouse_genomes_project 11 69691052 69693594 + MGP_WSBEiJ_P0029354 Gps2 protein_coding protein_coding MGP_WSBEiJ_T0029355.1 MGP_WSBEiJ_G0017930.1 mouse_genomes_project 11 69691194 69693595 + MGP_WSBEiJ_P0029355 Gps2 protein_coding protein_coding MGP_WSBEiJ_T0029356.1 MGP_WSBEiJ_G0017930.1 mouse_genomes_project 11 69691847 69692884 + Gps2 protein_coding processed_transcript MGP_WSBEiJ_T0029357.1 MGP_WSBEiJ_G0017930.1 mouse_genomes_project 11 69693044 69693560 + MGP_WSBEiJ_P0029357 Gps2 protein_coding protein_coding MGP_WSBEiJ_T0016657.1 MGP_WSBEiJ_G0014623.1 mouse_genomes_project 11 100341258 100341753 - Gm12356 processed_transcript processed_transcript MGP_WSBEiJ_T0030231.1 MGP_WSBEiJ_G0018134.1 mouse_genomes_project 11 78633685 78659390 + MGP_WSBEiJ_P0030231 Spag5 protein_coding protein_coding MGP_WSBEiJ_T0030232.1 MGP_WSBEiJ_G0018134.1 mouse_genomes_project 11 78633780 78650508 + Spag5 protein_coding retained_intron MGP_WSBEiJ_T0030233.1 MGP_WSBEiJ_G0018134.1 mouse_genomes_project 11 78633811 78650181 + Spag5 protein_coding retained_intron MGP_WSBEiJ_T0030234.1 MGP_WSBEiJ_G0018134.1 mouse_genomes_project 11 78648432 78649402 + Spag5 protein_coding retained_intron MGP_WSBEiJ_T0030235.1 MGP_WSBEiJ_G0018134.1 mouse_genomes_project 11 78650674 78652938 + Spag5 protein_coding retained_intron MGP_WSBEiJ_T0030236.1 MGP_WSBEiJ_G0018134.1 mouse_genomes_project 11 78652796 78656835 + Spag5 protein_coding retained_intron MGP_WSBEiJ_T0030237.1 MGP_WSBEiJ_G0018134.1 mouse_genomes_project 11 78654858 78657313 + Spag5 protein_coding processed_transcript MGP_WSBEiJ_T0030238.1 MGP_WSBEiJ_G0018134.1 mouse_genomes_project 11 78656863 78657678 + Spag5 protein_coding retained_intron MGP_WSBEiJ_T0030334.1 MGP_WSBEiJ_G0018163.1 mouse_genomes_project 11 80369082 80400577 - MGP_WSBEiJ_P0030334 Utp6 protein_coding protein_coding MGP_WSBEiJ_T0030335.1 MGP_WSBEiJ_G0018163.1 mouse_genomes_project 11 80370748 80400588 - MGP_WSBEiJ_P0030335 Utp6 protein_coding protein_coding MGP_WSBEiJ_T0030336.1 MGP_WSBEiJ_G0018163.1 mouse_genomes_project 11 80372645 80379242 - Utp6 protein_coding retained_intron MGP_WSBEiJ_T0030337.1 MGP_WSBEiJ_G0018163.1 mouse_genomes_project 11 80396798 80400565 - Utp6 protein_coding retained_intron MGP_WSBEiJ_T0009581.1 MGP_WSBEiJ_G0007738.1 mouse_genomes_project 11 88645461 88645525 + Mir142 miRNA miRNA MGP_WSBEiJ_T0029257.1 MGP_WSBEiJ_G0017907.1 mouse_genomes_project 11 69424272 69426213 - MGP_WSBEiJ_P0029257 Cd68 protein_coding protein_coding MGP_WSBEiJ_T0029258.1 MGP_WSBEiJ_G0017907.1 mouse_genomes_project 11 69424365 69426122 - Cd68 protein_coding processed_transcript MGP_WSBEiJ_T0029259.1 MGP_WSBEiJ_G0017907.1 mouse_genomes_project 11 69424430 69426122 - MGP_WSBEiJ_P0029259 Cd68 protein_coding protein_coding MGP_WSBEiJ_T0031607.1 MGP_WSBEiJ_G0018521.1 mouse_genomes_project 11 102550575 102575385 - MGP_WSBEiJ_P0031607 Rab5c protein_coding protein_coding MGP_WSBEiJ_T0031608.1 MGP_WSBEiJ_G0018521.1 mouse_genomes_project 11 102550577 102575385 - MGP_WSBEiJ_P0031608 Rab5c protein_coding protein_coding MGP_WSBEiJ_T0031609.1 MGP_WSBEiJ_G0018521.1 mouse_genomes_project 11 102554066 102567375 - MGP_WSBEiJ_P0031609 Rab5c protein_coding protein_coding MGP_WSBEiJ_T0031610.1 MGP_WSBEiJ_G0018521.1 mouse_genomes_project 11 102557109 102575346 - MGP_WSBEiJ_P0031610 Rab5c protein_coding protein_coding MGP_WSBEiJ_T0012498.1 MGP_WSBEiJ_G0010628.1 mouse_genomes_project 11 117694795 117695250 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027283.1 MGP_WSBEiJ_G0017399.1 mouse_genomes_project 11 3650315 3652300 - Wap protein_coding processed_transcript MGP_WSBEiJ_T0027284.1 MGP_WSBEiJ_G0017399.1 mouse_genomes_project 11 3650315 3654162 - MGP_WSBEiJ_P0027284 Wap protein_coding protein_coding MGP_WSBEiJ_T0027285.1 MGP_WSBEiJ_G0017399.1 mouse_genomes_project 11 3650372 3652289 - Wap protein_coding processed_transcript MGP_WSBEiJ_T0030514.1 MGP_WSBEiJ_G0018214.1 mouse_genomes_project 11 84267242 84272478 - MGP_WSBEiJ_P0030514 Ccl6 protein_coding protein_coding MGP_WSBEiJ_T0030515.1 MGP_WSBEiJ_G0018214.1 mouse_genomes_project 11 84267774 84269245 - Ccl6 protein_coding retained_intron MGP_WSBEiJ_T0030516.1 MGP_WSBEiJ_G0018214.1 mouse_genomes_project 11 84268845 84272366 - Ccl6 protein_coding retained_intron MGP_WSBEiJ_T0030836.1 MGP_WSBEiJ_G0018294.1 mouse_genomes_project 11 91015834 91037334 - MGP_WSBEiJ_P0030836 Pctp protein_coding protein_coding MGP_WSBEiJ_T0012329.1 MGP_WSBEiJ_G0010459.1 mouse_genomes_project 11 46927284 46927815 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006276.1 MGP_WSBEiJ_G0005231.1 mouse_genomes_project 11 120027313 120029186 + Gm11731 lincRNA lincRNA MGP_WSBEiJ_T0097275.1 MGP_WSBEiJ_G0035953.1 mouse_genomes_project 11 121942998 121943972 - Gm11749 sense_intronic sense_intronic MGP_WSBEiJ_T0030801.1 MGP_WSBEiJ_G0018281.1 mouse_genomes_project 11 89150922 89158290 + MGP_WSBEiJ_P0030801 Mrps23 protein_coding protein_coding MGP_WSBEiJ_T0030802.1 MGP_WSBEiJ_G0018281.1 mouse_genomes_project 11 89150945 89158290 + MGP_WSBEiJ_P0030802 Mrps23 protein_coding protein_coding MGP_WSBEiJ_T0030803.1 MGP_WSBEiJ_G0018281.1 mouse_genomes_project 11 89150958 89157463 + MGP_WSBEiJ_P0030803 Mrps23 protein_coding protein_coding MGP_WSBEiJ_T0030804.1 MGP_WSBEiJ_G0018281.1 mouse_genomes_project 11 89150958 89157003 + MGP_WSBEiJ_P0030804 Mrps23 protein_coding protein_coding MGP_WSBEiJ_T0030805.1 MGP_WSBEiJ_G0018281.1 mouse_genomes_project 11 89150978 89157764 + MGP_WSBEiJ_P0030805 Mrps23 protein_coding protein_coding MGP_WSBEiJ_T0031434.1 MGP_WSBEiJ_G0018439.1 mouse_genomes_project 11 100746469 100760727 + MGP_WSBEiJ_P0031434 Igfbp4 protein_coding protein_coding MGP_WSBEiJ_T0031435.1 MGP_WSBEiJ_G0018439.1 mouse_genomes_project 11 100746985 100758397 + MGP_WSBEiJ_P0031435 Igfbp4 protein_coding protein_coding MGP_WSBEiJ_T0031436.1 MGP_WSBEiJ_G0018439.1 mouse_genomes_project 11 100747411 100755003 + Igfbp4 protein_coding processed_transcript MGP_WSBEiJ_T0031437.1 MGP_WSBEiJ_G0018439.1 mouse_genomes_project 11 100750223 100758616 + Igfbp4 protein_coding processed_transcript MGP_WSBEiJ_T0031438.1 MGP_WSBEiJ_G0018439.1 mouse_genomes_project 11 100751392 100758511 + Igfbp4 protein_coding processed_transcript MGP_WSBEiJ_T0031439.1 MGP_WSBEiJ_G0018439.1 mouse_genomes_project 11 100753940 100758508 + MGP_WSBEiJ_P0031439 Igfbp4 protein_coding protein_coding MGP_WSBEiJ_T0028415.1 MGP_WSBEiJ_G0017690.1 mouse_genomes_project 11 53977713 54004472 - MGP_WSBEiJ_P0028415 Slc36a3 protein_coding protein_coding MGP_WSBEiJ_T0028416.1 MGP_WSBEiJ_G0017690.1 mouse_genomes_project 11 53977723 54004450 - MGP_WSBEiJ_P0028416 Slc36a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0028417.1 MGP_WSBEiJ_G0017690.1 mouse_genomes_project 11 54002254 54004472 - MGP_WSBEiJ_P0028417 Slc36a3 protein_coding protein_coding MGP_WSBEiJ_T0003276.1 MGP_WSBEiJ_G0003025.1 mouse_genomes_project 11 120068300 120070951 - Gm11730 antisense antisense MGP_WSBEiJ_T0003277.1 MGP_WSBEiJ_G0003025.1 mouse_genomes_project 11 120068437 120070911 - Gm11730 antisense antisense MGP_WSBEiJ_T0009529.1 MGP_WSBEiJ_G0007686.1 mouse_genomes_project 11 50745383 50745494 - Gm24157 miRNA miRNA MGP_WSBEiJ_T0027198.1 MGP_WSBEiJ_G0017382.1 mouse_genomes_project 11 2866758 2884518 - MGP_WSBEiJ_P0027198 Gck protein_coding protein_coding MGP_WSBEiJ_T0027199.1 MGP_WSBEiJ_G0017382.1 mouse_genomes_project 11 2866758 2884518 - MGP_WSBEiJ_P0027199 Gck protein_coding protein_coding MGP_WSBEiJ_T0027200.1 MGP_WSBEiJ_G0017382.1 mouse_genomes_project 11 2866761 2919047 - MGP_WSBEiJ_P0027200 Gck protein_coding protein_coding MGP_WSBEiJ_T0027201.1 MGP_WSBEiJ_G0017382.1 mouse_genomes_project 11 2867507 2868026 - MGP_WSBEiJ_P0027201 Gck protein_coding protein_coding MGP_WSBEiJ_T0028541.1 MGP_WSBEiJ_G0017746.1 mouse_genomes_project 11 58095679 58105128 + MGP_WSBEiJ_P0028541 Trim17 protein_coding protein_coding MGP_WSBEiJ_T0006266.1 MGP_WSBEiJ_G0005223.1 mouse_genomes_project 11 116803359 116807283 + 1700025D23Rik lincRNA lincRNA MGP_WSBEiJ_T0030312.1 MGP_WSBEiJ_G0018156.1 mouse_genomes_project 11 79695387 79696127 - MGP_WSBEiJ_P0030312 Gm9964 protein_coding protein_coding MGP_WSBEiJ_T0016594.1 MGP_WSBEiJ_G0014588.1 mouse_genomes_project 11 57323230 57324682 + 1700047K16Rik processed_transcript processed_transcript MGP_WSBEiJ_T0009624.1 MGP_WSBEiJ_G0007781.1 mouse_genomes_project 11 123172912 123172999 + Mir3065 miRNA miRNA MGP_WSBEiJ_T0031254.1 MGP_WSBEiJ_G0018397.1 mouse_genomes_project 11 99229642 99258695 - MGP_WSBEiJ_P0031254 Pip4k2b protein_coding protein_coding MGP_WSBEiJ_T0031255.1 MGP_WSBEiJ_G0018397.1 mouse_genomes_project 11 99234863 99241179 - Pip4k2b protein_coding processed_transcript MGP_WSBEiJ_T0027057.1 MGP_WSBEiJ_G0017350.1 mouse_genomes_project 11 1107104 1110359 + Osm protein_coding processed_transcript MGP_WSBEiJ_T0027058.1 MGP_WSBEiJ_G0017350.1 mouse_genomes_project 11 1107104 1111721 + MGP_WSBEiJ_P0027058 Osm protein_coding protein_coding MGP_WSBEiJ_T0012245.1 MGP_WSBEiJ_G0010375.1 mouse_genomes_project 11 15532634 15534697 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0031912.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104306124 104320748 - MGP_WSBEiJ_P0031912 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031913.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104306125 104320748 - MGP_WSBEiJ_P0031913 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031914.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104308108 104320010 - MGP_WSBEiJ_P0031914 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031915.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104308108 104318871 - MGP_WSBEiJ_P0031915 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031916.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104308108 104318847 - MGP_WSBEiJ_P0031916 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031917.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104308108 104320748 - MGP_WSBEiJ_P0031917 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031918.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104308177 104319455 - MGP_WSBEiJ_P0031918 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031919.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104308482 104319803 - MGP_WSBEiJ_P0031919 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031920.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104308670 104321389 - MGP_WSBEiJ_P0031920 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031921.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104310714 104311607 - Ubtf protein_coding retained_intron MGP_WSBEiJ_T0031922.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104311206 104312075 - Ubtf protein_coding retained_intron MGP_WSBEiJ_T0031923.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104313921 104318842 - MGP_WSBEiJ_P0031923 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0031924.1 MGP_WSBEiJ_G0018585.1 mouse_genomes_project 11 104315775 104318872 - MGP_WSBEiJ_P0031924 Ubtf protein_coding protein_coding MGP_WSBEiJ_T0028764.1 MGP_WSBEiJ_G0017798.1 mouse_genomes_project 11 60583863 60625639 - MGP_WSBEiJ_P0028764 Slc47a2 protein_coding protein_coding MGP_WSBEiJ_T0028765.1 MGP_WSBEiJ_G0017798.1 mouse_genomes_project 11 60586147 60625629 - MGP_WSBEiJ_P0028765 Slc47a2 protein_coding protein_coding MGP_WSBEiJ_T0028766.1 MGP_WSBEiJ_G0017798.1 mouse_genomes_project 11 60619707 60625363 - Slc47a2 protein_coding processed_transcript MGP_WSBEiJ_T0027250.1 MGP_WSBEiJ_G0017393.1 mouse_genomes_project 11 3401642 3421752 - MGP_WSBEiJ_P0027250 H2afv protein_coding protein_coding MGP_WSBEiJ_T0027251.1 MGP_WSBEiJ_G0017393.1 mouse_genomes_project 11 3402551 3421661 - MGP_WSBEiJ_P0027251 H2afv protein_coding protein_coding MGP_WSBEiJ_T0016654.1 MGP_WSBEiJ_G0014620.1 mouse_genomes_project 11 99571109 99574796 + Gm11629 processed_transcript processed_transcript MGP_WSBEiJ_T0003299.1 MGP_WSBEiJ_G0003043.1 mouse_genomes_project 11 124234242 124258054 + Gm11775 antisense antisense MGP_WSBEiJ_T0097191.1 MGP_WSBEiJ_G0035872.1 mouse_genomes_project 11 87830783 87830914 - Gm22387 scaRNA scaRNA MGP_WSBEiJ_T0012512.1 MGP_WSBEiJ_G0010642.1 mouse_genomes_project 11 124208237 124208653 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016692.1 MGP_WSBEiJ_G0014640.1 mouse_genomes_project 11 123315662 123317428 + Gm11769 processed_transcript processed_transcript MGP_WSBEiJ_T0003232.1 MGP_WSBEiJ_G0002990.1 mouse_genomes_project 11 104385016 104386487 - Bloodlinc antisense antisense MGP_WSBEiJ_T0003091.1 MGP_WSBEiJ_G0002878.1 mouse_genomes_project 11 53050639 53057534 + Gm12223 antisense antisense MGP_WSBEiJ_T0100471.1 MGP_WSBEiJ_G0038930.1 mouse_genomes_project 11 57048413 57057133 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0027849.1 MGP_WSBEiJ_G0017537.1 mouse_genomes_project 11 41268653 41278246 + Atp10b protein_coding processed_transcript MGP_WSBEiJ_T0027850.1 MGP_WSBEiJ_G0017537.1 mouse_genomes_project 11 41270364 41381976 + MGP_WSBEiJ_P0027850 Atp10b protein_coding protein_coding MGP_WSBEiJ_T0027851.1 MGP_WSBEiJ_G0017537.1 mouse_genomes_project 11 41274641 41322429 + Atp10b protein_coding processed_transcript MGP_WSBEiJ_T0031805.1 MGP_WSBEiJ_G0018564.1 mouse_genomes_project 11 103607695 103609985 + MGP_WSBEiJ_P0031805 Arl4d protein_coding protein_coding MGP_WSBEiJ_T0012418.1 MGP_WSBEiJ_G0010548.1 mouse_genomes_project 11 80335002 80335743 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012422.1 MGP_WSBEiJ_G0010552.1 mouse_genomes_project 11 82119751 82120570 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032240.1 MGP_WSBEiJ_G0018654.1 mouse_genomes_project 11 108458818 108465756 - MGP_WSBEiJ_P0032240 Ftsj3 protein_coding protein_coding MGP_WSBEiJ_T0032241.1 MGP_WSBEiJ_G0018654.1 mouse_genomes_project 11 108459575 108460375 - Ftsj3 protein_coding retained_intron MGP_WSBEiJ_T0032242.1 MGP_WSBEiJ_G0018654.1 mouse_genomes_project 11 108460685 108462231 - Ftsj3 protein_coding retained_intron MGP_WSBEiJ_T0032243.1 MGP_WSBEiJ_G0018654.1 mouse_genomes_project 11 108463052 108463672 - Ftsj3 protein_coding retained_intron MGP_WSBEiJ_T0032244.1 MGP_WSBEiJ_G0018654.1 mouse_genomes_project 11 108463968 108465473 - Ftsj3 protein_coding retained_intron MGP_WSBEiJ_T0032245.1 MGP_WSBEiJ_G0018654.1 mouse_genomes_project 11 108464539 108465481 - Ftsj3 protein_coding retained_intron MGP_WSBEiJ_T0032862.1 MGP_WSBEiJ_G0018782.1 mouse_genomes_project 11 119338647 119344728 + MGP_WSBEiJ_P0032862 Ubald2 protein_coding protein_coding MGP_WSBEiJ_T0032864.1 MGP_WSBEiJ_G0018782.1 mouse_genomes_project 11 119339076 119343876 + Ubald2 protein_coding processed_transcript MGP_WSBEiJ_T0029686.1 MGP_WSBEiJ_G0017993.1 mouse_genomes_project 11 72172569 72175458 - MGP_WSBEiJ_P0029686 Gm43951 protein_coding protein_coding MGP_WSBEiJ_T0098909.1 MGP_WSBEiJ_G0037572.1 mouse_genomes_project 11 24829022 24829154 - Gm25387 snoRNA snoRNA MGP_WSBEiJ_T0030735.1 MGP_WSBEiJ_G0018267.1 mouse_genomes_project 11 88461715 88488812 + MGP_WSBEiJ_P0030735 Mtmr4 protein_coding protein_coding MGP_WSBEiJ_T0030736.1 MGP_WSBEiJ_G0018267.1 mouse_genomes_project 11 88461772 88488812 + MGP_WSBEiJ_P0030736 Mtmr4 protein_coding protein_coding MGP_WSBEiJ_T0030737.1 MGP_WSBEiJ_G0018267.1 mouse_genomes_project 11 88461779 88468498 + MGP_WSBEiJ_P0030737 Mtmr4 protein_coding protein_coding MGP_WSBEiJ_T0030738.1 MGP_WSBEiJ_G0018267.1 mouse_genomes_project 11 88462017 88467283 + MGP_WSBEiJ_P0030738 Mtmr4 protein_coding protein_coding MGP_WSBEiJ_T0030739.1 MGP_WSBEiJ_G0018267.1 mouse_genomes_project 11 88462450 88487682 + MGP_WSBEiJ_P0030739 Mtmr4 protein_coding protein_coding MGP_WSBEiJ_T0030740.1 MGP_WSBEiJ_G0018267.1 mouse_genomes_project 11 88465203 88470630 + MGP_WSBEiJ_P0030740 Mtmr4 protein_coding protein_coding MGP_WSBEiJ_T0033279.1 MGP_WSBEiJ_G0018863.1 mouse_genomes_project 11 123721293 123728111 - Fam195b protein_coding processed_transcript MGP_WSBEiJ_T0033280.1 MGP_WSBEiJ_G0018863.1 mouse_genomes_project 11 123721293 123728137 - MGP_WSBEiJ_P0033280 Fam195b protein_coding protein_coding MGP_WSBEiJ_T0003140.1 MGP_WSBEiJ_G0002917.1 mouse_genomes_project 11 67145675 67151490 - Gm12301 antisense antisense MGP_WSBEiJ_T0029006.1 MGP_WSBEiJ_G0017850.1 mouse_genomes_project 11 66793830 66817525 + MGP_WSBEiJ_P0029006 Myh4 protein_coding protein_coding MGP_WSBEiJ_T0027331.1 MGP_WSBEiJ_G0017415.1 mouse_genomes_project 11 8806351 8832507 + MGP_WSBEiJ_P0027331 Ikzf1 protein_coding protein_coding MGP_WSBEiJ_T0027332.1 MGP_WSBEiJ_G0017415.1 mouse_genomes_project 11 8806351 8880833 + MGP_WSBEiJ_P0027332 Ikzf1 protein_coding protein_coding MGP_WSBEiJ_T0027333.1 MGP_WSBEiJ_G0017415.1 mouse_genomes_project 11 8807273 8898433 + MGP_WSBEiJ_P0027333 Ikzf1 protein_coding protein_coding MGP_WSBEiJ_T0027334.1 MGP_WSBEiJ_G0017415.1 mouse_genomes_project 11 8807561 8899248 + MGP_WSBEiJ_P0027334 Ikzf1 protein_coding protein_coding MGP_WSBEiJ_T0027335.1 MGP_WSBEiJ_G0017415.1 mouse_genomes_project 11 8807577 8888181 + MGP_WSBEiJ_P0027335 Ikzf1 protein_coding protein_coding MGP_WSBEiJ_T0027336.1 MGP_WSBEiJ_G0017415.1 mouse_genomes_project 11 8807793 8896119 + MGP_WSBEiJ_P0027336 Ikzf1 protein_coding protein_coding MGP_WSBEiJ_T0097692.1 MGP_WSBEiJ_G0036355.1 mouse_genomes_project 11 50607906 50608014 + Gm26061 snRNA snRNA MGP_WSBEiJ_T0032588.1 MGP_WSBEiJ_G0018735.1 mouse_genomes_project 11 118122493 118147674 + MGP_WSBEiJ_P0032588 Otop2 protein_coding protein_coding MGP_WSBEiJ_T0032590.1 MGP_WSBEiJ_G0018735.1 mouse_genomes_project 11 118137838 118138873 + Otop2 protein_coding processed_transcript MGP_WSBEiJ_T0032591.1 MGP_WSBEiJ_G0018735.1 mouse_genomes_project 11 118138069 118138866 + Otop2 protein_coding processed_transcript MGP_WSBEiJ_T0032592.1 MGP_WSBEiJ_G0018735.1 mouse_genomes_project 11 118138233 118147674 + MGP_WSBEiJ_P0032592 Otop2 protein_coding protein_coding MGP_WSBEiJ_T0012475.1 MGP_WSBEiJ_G0010605.1 mouse_genomes_project 11 106630552 106630964 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032104.1 MGP_WSBEiJ_G0018620.1 mouse_genomes_project 11 105743422 105744433 + MGP_WSBEiJ_P0032104 Rprml protein_coding protein_coding MGP_WSBEiJ_T0032850.1 MGP_WSBEiJ_G0018780.1 mouse_genomes_project 11 119231682 119236286 - MGP_WSBEiJ_P0032850 Foxj1 protein_coding protein_coding MGP_WSBEiJ_T0029498.1 MGP_WSBEiJ_G0017959.1 mouse_genomes_project 11 70273249 70274172 + MGP_WSBEiJ_P0029498 Zmynd15 protein_coding protein_coding MGP_WSBEiJ_T0029499.1 MGP_WSBEiJ_G0017959.1 mouse_genomes_project 11 70273446 70274206 + MGP_WSBEiJ_P0029499 Zmynd15 protein_coding protein_coding MGP_WSBEiJ_T0029500.1 MGP_WSBEiJ_G0017959.1 mouse_genomes_project 11 70273505 70279509 + Zmynd15 protein_coding retained_intron MGP_WSBEiJ_T0029501.1 MGP_WSBEiJ_G0017959.1 mouse_genomes_project 11 70273874 70279400 + MGP_WSBEiJ_P0029501 Zmynd15 protein_coding protein_coding MGP_WSBEiJ_T0029502.1 MGP_WSBEiJ_G0017959.1 mouse_genomes_project 11 70273879 70279519 + MGP_WSBEiJ_P0029502 Zmynd15 protein_coding protein_coding MGP_WSBEiJ_T0012231.1 MGP_WSBEiJ_G0010361.1 mouse_genomes_project 11 11599112 11599515 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0027323.1 MGP_WSBEiJ_G0017412.1 mouse_genomes_project 11 8241159 8380557 + MGP_WSBEiJ_P0027323 Vwc2 protein_coding protein_coding MGP_WSBEiJ_T0027324.1 MGP_WSBEiJ_G0017412.1 mouse_genomes_project 11 8241680 8385923 + MGP_WSBEiJ_P0027324 Vwc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0027325.1 MGP_WSBEiJ_G0017412.1 mouse_genomes_project 11 8242787 8383668 + MGP_WSBEiJ_P0027325 Vwc2 protein_coding protein_coding MGP_WSBEiJ_T0027326.1 MGP_WSBEiJ_G0017412.1 mouse_genomes_project 11 8243421 8254932 + Vwc2 protein_coding processed_transcript MGP_WSBEiJ_T0029509.1 MGP_WSBEiJ_G0017963.1 mouse_genomes_project 11 70343716 70344773 + Psmb6 protein_coding retained_intron MGP_WSBEiJ_T0029510.1 MGP_WSBEiJ_G0017963.1 mouse_genomes_project 11 70343735 70345998 + MGP_WSBEiJ_P0029510 Psmb6 protein_coding protein_coding MGP_WSBEiJ_T0029511.1 MGP_WSBEiJ_G0017963.1 mouse_genomes_project 11 70344458 70345542 + Psmb6 protein_coding retained_intron MGP_WSBEiJ_T0029512.1 MGP_WSBEiJ_G0017963.1 mouse_genomes_project 11 70345420 70346207 + Psmb6 protein_coding retained_intron MGP_WSBEiJ_T0012400.1 MGP_WSBEiJ_G0010530.1 mouse_genomes_project 11 73857287 73857483 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0030086.1 MGP_WSBEiJ_G0018107.1 mouse_genomes_project 11 77731264 77736977 - MGP_WSBEiJ_P0030086 Ankrd13b protein_coding protein_coding MGP_WSBEiJ_T0030087.1 MGP_WSBEiJ_G0018107.1 mouse_genomes_project 11 77731264 77751012 - MGP_WSBEiJ_P0030087 Ankrd13b protein_coding protein_coding MGP_WSBEiJ_T0030088.1 MGP_WSBEiJ_G0018107.1 mouse_genomes_project 11 77731266 77734405 - Ankrd13b protein_coding retained_intron MGP_WSBEiJ_T0030089.1 MGP_WSBEiJ_G0018107.1 mouse_genomes_project 11 77731266 77751024 - MGP_WSBEiJ_P0030089 Ankrd13b protein_coding protein_coding MGP_WSBEiJ_T0030090.1 MGP_WSBEiJ_G0018107.1 mouse_genomes_project 11 77732894 77737306 - Ankrd13b protein_coding retained_intron MGP_WSBEiJ_T0030091.1 MGP_WSBEiJ_G0018107.1 mouse_genomes_project 11 77733551 77736788 - MGP_WSBEiJ_P0030091 Ankrd13b protein_coding protein_coding MGP_WSBEiJ_T0009619.1 MGP_WSBEiJ_G0007776.1 mouse_genomes_project 11 121048342 121048423 + Mir6933 miRNA miRNA MGP_WSBEiJ_T0100491.1 MGP_WSBEiJ_G0038950.1 mouse_genomes_project 11 95999574 96000358 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012295.1 MGP_WSBEiJ_G0010425.1 mouse_genomes_project 11 28614514 28615494 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012384.1 MGP_WSBEiJ_G0010514.1 mouse_genomes_project 11 68755648 68755819 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006191.1 MGP_WSBEiJ_G0005172.1 mouse_genomes_project 11 78795220 78796015 + Gm11195 lincRNA lincRNA MGP_WSBEiJ_T0006192.1 MGP_WSBEiJ_G0005173.1 mouse_genomes_project 11 80131438 80132229 + Gm11205 lincRNA lincRNA MGP_WSBEiJ_T0031483.1 MGP_WSBEiJ_G0018470.1 mouse_genomes_project 11 101403365 101403988 - MGP_WSBEiJ_P0031483 Gm11555 protein_coding protein_coding MGP_WSBEiJ_T0028048.1 MGP_WSBEiJ_G0017603.1 mouse_genomes_project 11 48310899 48324786 + Gfpt2 protein_coding retained_intron MGP_WSBEiJ_T0028049.1 MGP_WSBEiJ_G0017603.1 mouse_genomes_project 11 48310908 48356574 + MGP_WSBEiJ_P0028049 Gfpt2 protein_coding protein_coding MGP_WSBEiJ_T0027484.1 MGP_WSBEiJ_G0017451.1 mouse_genomes_project 11 20264426 20353120 - MGP_WSBEiJ_P0027484 protein_coding protein_coding MGP_WSBEiJ_T0027485.1 MGP_WSBEiJ_G0017451.1 mouse_genomes_project 11 20268049 20352990 - MGP_WSBEiJ_P0027485 protein_coding protein_coding MGP_WSBEiJ_T0027486.1 MGP_WSBEiJ_G0017451.1 mouse_genomes_project 11 20268054 20349722 - MGP_WSBEiJ_P0027486 protein_coding protein_coding MGP_WSBEiJ_T0027487.1 MGP_WSBEiJ_G0017451.1 mouse_genomes_project 11 20268125 20327689 - protein_coding retained_intron MGP_WSBEiJ_T0027488.1 MGP_WSBEiJ_G0017451.1 mouse_genomes_project 11 20268313 20343572 - protein_coding processed_transcript MGP_WSBEiJ_T0027489.1 MGP_WSBEiJ_G0017451.1 mouse_genomes_project 11 20326893 20352922 - MGP_WSBEiJ_P0027489 protein_coding protein_coding MGP_WSBEiJ_T0030378.1 MGP_WSBEiJ_G0018173.1 mouse_genomes_project 11 80856238 80869699 + MGP_WSBEiJ_P0030378 Zfp207 protein_coding protein_coding MGP_WSBEiJ_T0030379.1 MGP_WSBEiJ_G0018173.1 mouse_genomes_project 11 80856238 80879152 + MGP_WSBEiJ_P0030379 Zfp207 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030380.1 MGP_WSBEiJ_G0018173.1 mouse_genomes_project 11 80856262 80869702 + MGP_WSBEiJ_P0030380 Zfp207 protein_coding protein_coding MGP_WSBEiJ_T0030381.1 MGP_WSBEiJ_G0018173.1 mouse_genomes_project 11 80856290 80867729 + MGP_WSBEiJ_P0030381 Zfp207 protein_coding protein_coding MGP_WSBEiJ_T0030382.1 MGP_WSBEiJ_G0018173.1 mouse_genomes_project 11 80856356 80869020 + MGP_WSBEiJ_P0030382 Zfp207 protein_coding protein_coding MGP_WSBEiJ_T0030383.1 MGP_WSBEiJ_G0018173.1 mouse_genomes_project 11 80858932 80865329 + MGP_WSBEiJ_P0030383 Zfp207 protein_coding protein_coding MGP_WSBEiJ_T0030384.1 MGP_WSBEiJ_G0018173.1 mouse_genomes_project 11 80862592 80878240 + MGP_WSBEiJ_P0030384 Zfp207 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0031245.1 MGP_WSBEiJ_G0018395.1 mouse_genomes_project 11 99202656 99214299 - MGP_WSBEiJ_P0031245 Pcgf2 protein_coding protein_coding MGP_WSBEiJ_T0031246.1 MGP_WSBEiJ_G0018395.1 mouse_genomes_project 11 99202656 99214083 - MGP_WSBEiJ_P0031246 Pcgf2 protein_coding protein_coding MGP_WSBEiJ_T0031247.1 MGP_WSBEiJ_G0018395.1 mouse_genomes_project 11 99204509 99215942 - MGP_WSBEiJ_P0031247 Pcgf2 protein_coding protein_coding MGP_WSBEiJ_T0031248.1 MGP_WSBEiJ_G0018395.1 mouse_genomes_project 11 99204509 99214299 - MGP_WSBEiJ_P0031248 Pcgf2 protein_coding protein_coding MGP_WSBEiJ_T0031249.1 MGP_WSBEiJ_G0018395.1 mouse_genomes_project 11 99204676 99207478 - MGP_WSBEiJ_P0031249 Pcgf2 protein_coding protein_coding MGP_WSBEiJ_T0031250.1 MGP_WSBEiJ_G0018395.1 mouse_genomes_project 11 99205217 99207115 - Pcgf2 protein_coding processed_transcript MGP_WSBEiJ_T0098944.1 MGP_WSBEiJ_G0037607.1 mouse_genomes_project 11 83960551 83960648 + Snord7 snoRNA snoRNA MGP_WSBEiJ_T0031505.1 MGP_WSBEiJ_G0018492.1 mouse_genomes_project 11 101876071 101880652 - Krt32 protein_coding processed_transcript MGP_WSBEiJ_T0031506.1 MGP_WSBEiJ_G0018492.1 mouse_genomes_project 11 101876080 101883439 - MGP_WSBEiJ_P0031506 Krt32 protein_coding protein_coding MGP_WSBEiJ_T0100476.1 MGP_WSBEiJ_G0038935.1 mouse_genomes_project 11 73552934 73553021 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012383.1 MGP_WSBEiJ_G0010513.1 mouse_genomes_project 11 67690392 67690776 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032960.1 MGP_WSBEiJ_G0018799.1 mouse_genomes_project 11 119866389 119937886 + MGP_WSBEiJ_P0032960 Mgat5b protein_coding protein_coding MGP_WSBEiJ_T0032961.1 MGP_WSBEiJ_G0018799.1 mouse_genomes_project 11 119895995 119925308 + Mgat5b protein_coding processed_transcript MGP_WSBEiJ_T0032962.1 MGP_WSBEiJ_G0018799.1 mouse_genomes_project 11 119915498 119929378 + MGP_WSBEiJ_P0032962 Mgat5b protein_coding protein_coding MGP_WSBEiJ_T0032963.1 MGP_WSBEiJ_G0018799.1 mouse_genomes_project 11 119924073 119937878 + Mgat5b protein_coding retained_intron MGP_WSBEiJ_T0003049.1 MGP_WSBEiJ_G0002840.1 mouse_genomes_project 11 8674704 8697689 + Gm11998 antisense antisense MGP_WSBEiJ_T0032419.1 MGP_WSBEiJ_G0018692.1 mouse_genomes_project 11 111982671 112024374 - MGP_WSBEiJ_P0032419 Wipi1 protein_coding protein_coding MGP_WSBEiJ_T0032420.1 MGP_WSBEiJ_G0018692.1 mouse_genomes_project 11 111984474 112024374 - MGP_WSBEiJ_P0032420 Wipi1 protein_coding protein_coding MGP_WSBEiJ_T0032421.1 MGP_WSBEiJ_G0018692.1 mouse_genomes_project 11 111991394 112024374 - MGP_WSBEiJ_P0032421 Wipi1 protein_coding protein_coding MGP_WSBEiJ_T0032422.1 MGP_WSBEiJ_G0018692.1 mouse_genomes_project 11 112024180 112024909 - Wipi1 protein_coding processed_transcript MGP_WSBEiJ_T0033381.1 MGP_WSBEiJ_G0018882.1 mouse_genomes_project 11 123955447 123955567 + MGP_WSBEiJ_P0033381 protein_coding protein_coding MGP_WSBEiJ_T0098911.1 MGP_WSBEiJ_G0037574.1 mouse_genomes_project 11 32726169 32726296 - Gm22022 snoRNA snoRNA MGP_WSBEiJ_T0012379.1 MGP_WSBEiJ_G0010509.1 mouse_genomes_project 11 64514595 64515087 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009537.1 MGP_WSBEiJ_G0007694.1 mouse_genomes_project 11 59425709 59425789 - Mir6921 miRNA miRNA MGP_WSBEiJ_T0030273.1 MGP_WSBEiJ_G0018145.1 mouse_genomes_project 11 78866693 78878352 + MGP_WSBEiJ_P0030273 Poldip2 protein_coding protein_coding MGP_WSBEiJ_T0030274.1 MGP_WSBEiJ_G0018145.1 mouse_genomes_project 11 78866888 78868524 + Poldip2 protein_coding processed_transcript MGP_WSBEiJ_T0030275.1 MGP_WSBEiJ_G0018145.1 mouse_genomes_project 11 78866916 78877787 + MGP_WSBEiJ_P0030275 Poldip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0030276.1 MGP_WSBEiJ_G0018145.1 mouse_genomes_project 11 78870772 78873550 + Poldip2 protein_coding retained_intron MGP_WSBEiJ_T0030277.1 MGP_WSBEiJ_G0018145.1 mouse_genomes_project 11 78871364 78874203 + Poldip2 protein_coding retained_intron MGP_WSBEiJ_T0030278.1 MGP_WSBEiJ_G0018145.1 mouse_genomes_project 11 78873948 78874879 + Poldip2 protein_coding retained_intron MGP_WSBEiJ_T0029543.1 MGP_WSBEiJ_G0017969.1 mouse_genomes_project 11 70472678 70475541 - MGP_WSBEiJ_P0029543 Slc25a11 protein_coding protein_coding MGP_WSBEiJ_T0029544.1 MGP_WSBEiJ_G0017969.1 mouse_genomes_project 11 70473177 70474393 - Slc25a11 protein_coding retained_intron MGP_WSBEiJ_T0029545.1 MGP_WSBEiJ_G0017969.1 mouse_genomes_project 11 70473713 70475962 - MGP_WSBEiJ_P0029545 Slc25a11 protein_coding protein_coding MGP_WSBEiJ_T0029546.1 MGP_WSBEiJ_G0017969.1 mouse_genomes_project 11 70474391 70475461 - Slc25a11 protein_coding retained_intron MGP_WSBEiJ_T0029547.1 MGP_WSBEiJ_G0017969.1 mouse_genomes_project 11 70474397 70475382 - MGP_WSBEiJ_P0029547 Slc25a11 protein_coding protein_coding MGP_WSBEiJ_T0012459.1 MGP_WSBEiJ_G0010589.1 mouse_genomes_project 11 101482751 101482904 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0032677.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118457356 118462312 - Mif4gd protein_coding processed_transcript MGP_WSBEiJ_T0032678.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118457356 118462352 - Mif4gd protein_coding processed_transcript MGP_WSBEiJ_T0032679.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118457356 118462394 - MGP_WSBEiJ_P0032679 Mif4gd protein_coding protein_coding MGP_WSBEiJ_T0032680.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118457356 118461937 - MGP_WSBEiJ_P0032680 Mif4gd protein_coding protein_coding MGP_WSBEiJ_T0032681.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118457587 118462303 - MGP_WSBEiJ_P0032681 Mif4gd protein_coding protein_coding MGP_WSBEiJ_T0032682.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118457645 118462255 - Mif4gd protein_coding processed_transcript MGP_WSBEiJ_T0032683.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118457855 118462324 - Mif4gd protein_coding processed_transcript MGP_WSBEiJ_T0032684.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118457950 118461560 - MGP_WSBEiJ_P0032684 Mif4gd protein_coding protein_coding MGP_WSBEiJ_T0032685.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118458615 118462329 - Mif4gd protein_coding processed_transcript MGP_WSBEiJ_T0032686.1 MGP_WSBEiJ_G0018752.1 mouse_genomes_project 11 118461535 118462345 - Mif4gd protein_coding processed_transcript MGP_WSBEiJ_T0033584.1 MGP_WSBEiJ_G0018933.1 mouse_genomes_project 12 1812696 1946245 + MGP_WSBEiJ_P0033584 Atad2b protein_coding protein_coding MGP_WSBEiJ_T0033585.1 MGP_WSBEiJ_G0018933.1 mouse_genomes_project 12 1813001 1949600 + MGP_WSBEiJ_P0033585 Atad2b protein_coding unknown_likely_coding MGP_WSBEiJ_T0009674.1 MGP_WSBEiJ_G0007831.1 mouse_genomes_project 12 110161086 110161163 - Gm23872 miRNA miRNA MGP_WSBEiJ_T0035274.1 MGP_WSBEiJ_G0019517.1 mouse_genomes_project 12 114836761 114844879 + MGP_WSBEiJ_P0035274 4930427A07Rik protein_coding protein_coding MGP_WSBEiJ_T0035275.1 MGP_WSBEiJ_G0019517.1 mouse_genomes_project 12 114836770 114837268 + 4930427A07Rik protein_coding retained_intron MGP_WSBEiJ_T0035276.1 MGP_WSBEiJ_G0019517.1 mouse_genomes_project 12 114836780 114846578 + MGP_WSBEiJ_P0035276 4930427A07Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035277.1 MGP_WSBEiJ_G0019517.1 mouse_genomes_project 12 114836796 114837930 + 4930427A07Rik protein_coding retained_intron MGP_WSBEiJ_T0035278.1 MGP_WSBEiJ_G0019517.1 mouse_genomes_project 12 114836846 114842114 + MGP_WSBEiJ_P0035278 4930427A07Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035279.1 MGP_WSBEiJ_G0019517.1 mouse_genomes_project 12 114837911 114844882 + 4930427A07Rik protein_coding retained_intron MGP_WSBEiJ_T0000255.1 MGP_WSBEiJ_G0000203.1 mouse_genomes_project 12 116841227 116841654 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034981.1 MGP_WSBEiJ_G0019414.1 mouse_genomes_project 12 105256192 105317524 + MGP_WSBEiJ_P0034981 protein_coding protein_coding MGP_WSBEiJ_T0034982.1 MGP_WSBEiJ_G0019414.1 mouse_genomes_project 12 105256192 105317518 + MGP_WSBEiJ_P0034982 protein_coding protein_coding MGP_WSBEiJ_T0034984.1 MGP_WSBEiJ_G0019414.1 mouse_genomes_project 12 105256282 105317518 + MGP_WSBEiJ_P0034984 protein_coding protein_coding MGP_WSBEiJ_T0012552.1 MGP_WSBEiJ_G0010682.1 mouse_genomes_project 12 86896475 86896934 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034599.1 MGP_WSBEiJ_G0019296.1 mouse_genomes_project 12 85170536 85193454 + MGP_WSBEiJ_P0034599 Dlst protein_coding protein_coding MGP_WSBEiJ_T0000838.1 MGP_WSBEiJ_G0000777.1 mouse_genomes_project 12 104978092 104980549 - TEC TEC MGP_WSBEiJ_T0034568.1 MGP_WSBEiJ_G0019287.1 mouse_genomes_project 12 84715782 84739019 - MGP_WSBEiJ_P0034568 Syndig1l protein_coding protein_coding MGP_WSBEiJ_T0034109.1 MGP_WSBEiJ_G0019129.1 mouse_genomes_project 12 65319720 65320746 - MGP_WSBEiJ_P0034109 Rpl10l protein_coding protein_coding MGP_WSBEiJ_T0009661.1 MGP_WSBEiJ_G0007818.1 mouse_genomes_project 12 87245075 87245189 + Gm25847 miRNA miRNA MGP_WSBEiJ_T0035240.1 MGP_WSBEiJ_G0019505.1 mouse_genomes_project 12 114483642 114492736 - MGP_WSBEiJ_P0035240 Cdca4 protein_coding protein_coding MGP_WSBEiJ_T0098980.1 MGP_WSBEiJ_G0037643.1 mouse_genomes_project 12 37735176 37735308 + Gm24434 snoRNA snoRNA MGP_WSBEiJ_T0034019.1 MGP_WSBEiJ_G0019098.1 mouse_genomes_project 12 54314133 54317240 + MGP_WSBEiJ_P0034019 Insm2 protein_coding protein_coding MGP_WSBEiJ_T0099008.1 MGP_WSBEiJ_G0037671.1 mouse_genomes_project 12 105526977 105527105 - Gm24334 snoRNA snoRNA MGP_WSBEiJ_T0034541.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84368623 84382061 + MGP_WSBEiJ_P0034541 Coq6 protein_coding protein_coding MGP_WSBEiJ_T0034542.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84368934 84382065 + MGP_WSBEiJ_P0034542 Coq6 protein_coding protein_coding MGP_WSBEiJ_T0034543.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84368962 84382065 + Coq6 protein_coding retained_intron MGP_WSBEiJ_T0034544.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84368996 84382061 + MGP_WSBEiJ_P0034544 Coq6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034545.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84369005 84382061 + MGP_WSBEiJ_P0034545 Coq6 protein_coding protein_coding MGP_WSBEiJ_T0034546.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84369007 84375038 + Coq6 protein_coding processed_transcript MGP_WSBEiJ_T0034547.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84369009 84382057 + Coq6 protein_coding retained_intron MGP_WSBEiJ_T0034548.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84369030 84379300 + MGP_WSBEiJ_P0034548 Coq6 protein_coding protein_coding MGP_WSBEiJ_T0034549.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84376357 84380512 + Coq6 protein_coding processed_transcript MGP_WSBEiJ_T0034550.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84376357 84382061 + Coq6 protein_coding processed_transcript MGP_WSBEiJ_T0034551.1 MGP_WSBEiJ_G0019278.1 mouse_genomes_project 12 84379270 84380434 + Coq6 protein_coding retained_intron MGP_WSBEiJ_T0033594.1 MGP_WSBEiJ_G0018939.1 mouse_genomes_project 12 5539451 5541673 - MGP_WSBEiJ_P0033594 Rhob protein_coding protein_coding MGP_WSBEiJ_T0100516.1 MGP_WSBEiJ_G0038974.1 mouse_genomes_project 12 104724705 104734372 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0034504.1 MGP_WSBEiJ_G0019265.1 mouse_genomes_project 12 83894883 83924633 - MGP_WSBEiJ_P0034504 Heatr4 protein_coding protein_coding MGP_WSBEiJ_T0006385.1 MGP_WSBEiJ_G0005317.1 mouse_genomes_project 12 110994813 110995737 + lincRNA lincRNA MGP_WSBEiJ_T0033700.1 MGP_WSBEiJ_G0018976.1 mouse_genomes_project 12 18707269 18724726 - MGP_WSBEiJ_P0033700 Itgb1bp1 protein_coding protein_coding MGP_WSBEiJ_T0033701.1 MGP_WSBEiJ_G0018976.1 mouse_genomes_project 12 18707556 18724586 - MGP_WSBEiJ_P0033701 Itgb1bp1 protein_coding protein_coding MGP_WSBEiJ_T0033702.1 MGP_WSBEiJ_G0018976.1 mouse_genomes_project 12 18708167 18709589 - MGP_WSBEiJ_P0033702 Itgb1bp1 protein_coding protein_coding MGP_WSBEiJ_T0033703.1 MGP_WSBEiJ_G0018976.1 mouse_genomes_project 12 18708753 18724674 - MGP_WSBEiJ_P0033703 Itgb1bp1 protein_coding protein_coding MGP_WSBEiJ_T0033704.1 MGP_WSBEiJ_G0018976.1 mouse_genomes_project 12 18708891 18710236 - Itgb1bp1 protein_coding retained_intron MGP_WSBEiJ_T0000259.1 MGP_WSBEiJ_G0000207.1 mouse_genomes_project 12 116885544 116885966 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0012531.1 MGP_WSBEiJ_G0010661.1 mouse_genomes_project 12 56066645 56067111 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034570.1 MGP_WSBEiJ_G0019289.1 mouse_genomes_project 12 84813330 84815150 + MGP_WSBEiJ_P0034570 Isca2 protein_coding protein_coding MGP_WSBEiJ_T0033878.1 MGP_WSBEiJ_G0019041.1 mouse_genomes_project 12 34114157 34156418 + MGP_WSBEiJ_P0033878 Ankmy2 protein_coding protein_coding MGP_WSBEiJ_T0034829.1 MGP_WSBEiJ_G0019360.1 mouse_genomes_project 12 100917019 100928654 + MGP_WSBEiJ_P0034829 Calm1 protein_coding protein_coding MGP_WSBEiJ_T0034830.1 MGP_WSBEiJ_G0019360.1 mouse_genomes_project 12 100917113 100921522 + Calm1 protein_coding retained_intron MGP_WSBEiJ_T0034831.1 MGP_WSBEiJ_G0019360.1 mouse_genomes_project 12 100917728 100928654 + MGP_WSBEiJ_P0034831 Calm1 protein_coding protein_coding MGP_WSBEiJ_T0034832.1 MGP_WSBEiJ_G0019360.1 mouse_genomes_project 12 100922987 100924080 + Calm1 protein_coding retained_intron MGP_WSBEiJ_T0000107.1 MGP_WSBEiJ_G0000083.1 mouse_genomes_project 12 116885544 116885838 - MGP_WSBEiJ_P0000107 Ighv1-42 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000108.1 MGP_WSBEiJ_G0000083.1 mouse_genomes_project 12 116885544 116885972 - MGP_WSBEiJ_P0000108 Ighv1-42 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000268.1 MGP_WSBEiJ_G0000216.1 mouse_genomes_project 12 118083422 118083855 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0000066.1 MGP_WSBEiJ_G0000054.1 mouse_genomes_project 12 115668598 115669078 - MGP_WSBEiJ_P0000066 Ighv5-15 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000067.1 MGP_WSBEiJ_G0000054.1 mouse_genomes_project 12 115668598 115669070 - MGP_WSBEiJ_P0000067 Ighv5-15 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000111.1 MGP_WSBEiJ_G0000085.1 mouse_genomes_project 12 116976221 116976515 - MGP_WSBEiJ_P0000111 Ighv8-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000112.1 MGP_WSBEiJ_G0000085.1 mouse_genomes_project 12 116976221 116976655 - MGP_WSBEiJ_P0000112 Ighv8-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033784.1 MGP_WSBEiJ_G0019008.1 mouse_genomes_project 12 28688230 28738676 + Sh3yl1 protein_coding retained_intron MGP_WSBEiJ_T0033785.1 MGP_WSBEiJ_G0019008.1 mouse_genomes_project 12 28688230 28738820 + MGP_WSBEiJ_P0033785 Sh3yl1 protein_coding protein_coding MGP_WSBEiJ_T0033786.1 MGP_WSBEiJ_G0019008.1 mouse_genomes_project 12 28688254 28738809 + MGP_WSBEiJ_P0033786 Sh3yl1 protein_coding protein_coding MGP_WSBEiJ_T0033787.1 MGP_WSBEiJ_G0019008.1 mouse_genomes_project 12 28688749 28738814 + Sh3yl1 protein_coding processed_transcript MGP_WSBEiJ_T0000131.1 MGP_WSBEiJ_G0000098.1 mouse_genomes_project 12 118083422 118083855 - MGP_WSBEiJ_P0000131 Ighv1-80 IG_V_gene IG_V_gene MGP_WSBEiJ_T0006322.1 MGP_WSBEiJ_G0005269.1 mouse_genomes_project 12 50366751 50368198 + Gm26517 lincRNA lincRNA MGP_WSBEiJ_T0034654.1 MGP_WSBEiJ_G0019313.1 mouse_genomes_project 12 86211686 86300657 + MGP_WSBEiJ_P0034654 Ift43 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034655.1 MGP_WSBEiJ_G0019313.1 mouse_genomes_project 12 86211691 86300650 + MGP_WSBEiJ_P0034655 Ift43 protein_coding protein_coding MGP_WSBEiJ_T0009753.1 MGP_WSBEiJ_G0007910.1 mouse_genomes_project 12 119370654 119370723 + Mir153 miRNA miRNA MGP_WSBEiJ_T0012517.1 MGP_WSBEiJ_G0010647.1 mouse_genomes_project 12 766067 766586 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000031.1 MGP_WSBEiJ_G0000025.1 mouse_genomes_project 12 115211802 115211812 - IG_D_pseudogene IG_D_pseudogene MGP_WSBEiJ_T0016703.1 MGP_WSBEiJ_G0014645.1 mouse_genomes_project 12 31221640 31258334 - Atxn7l1os2 processed_transcript processed_transcript MGP_WSBEiJ_T0100519.1 MGP_WSBEiJ_G0038977.1 mouse_genomes_project 12 105041450 105047521 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097781.1 MGP_WSBEiJ_G0036444.1 mouse_genomes_project 12 86831852 86831959 + Gm22004 snRNA snRNA MGP_WSBEiJ_T0098991.1 MGP_WSBEiJ_G0037654.1 mouse_genomes_project 12 58537890 58538021 + Gm22673 snoRNA snoRNA MGP_WSBEiJ_T0034321.1 MGP_WSBEiJ_G0019206.1 mouse_genomes_project 12 75973894 75980673 + MGP_WSBEiJ_P0034321 Gm10451 protein_coding protein_coding MGP_WSBEiJ_T0009720.1 MGP_WSBEiJ_G0007877.1 mouse_genomes_project 12 111186620 111186699 + Mir300 miRNA miRNA MGP_WSBEiJ_T0034505.1 MGP_WSBEiJ_G0019266.1 mouse_genomes_project 12 83927506 83932779 + MGP_WSBEiJ_P0034505 protein_coding protein_coding MGP_WSBEiJ_T0033582.1 MGP_WSBEiJ_G0018932.1 mouse_genomes_project 12 1763690 1798680 - MGP_WSBEiJ_P0033582 Ubxn2a protein_coding protein_coding MGP_WSBEiJ_T0033583.1 MGP_WSBEiJ_G0018932.1 mouse_genomes_project 12 1764007 1798239 - MGP_WSBEiJ_P0033583 Ubxn2a protein_coding protein_coding MGP_WSBEiJ_T0009712.1 MGP_WSBEiJ_G0007869.1 mouse_genomes_project 12 111179586 111179662 + Mir543 miRNA miRNA MGP_WSBEiJ_T0009738.1 MGP_WSBEiJ_G0007895.1 mouse_genomes_project 12 111205619 111205699 + Mir412 miRNA miRNA MGP_WSBEiJ_T0034467.1 MGP_WSBEiJ_G0019258.1 mouse_genomes_project 12 83449755 83505494 - MGP_WSBEiJ_P0034467 Zfyve1 protein_coding protein_coding MGP_WSBEiJ_T0034161.1 MGP_WSBEiJ_G0019149.1 mouse_genomes_project 12 69129139 69206552 + MGP_WSBEiJ_P0034161 Atl1 protein_coding protein_coding MGP_WSBEiJ_T0034602.1 MGP_WSBEiJ_G0019299.1 mouse_genomes_project 12 85294025 85301265 + MGP_WSBEiJ_P0034602 Eif2b2 protein_coding protein_coding MGP_WSBEiJ_T0034603.1 MGP_WSBEiJ_G0019299.1 mouse_genomes_project 12 85294048 85297452 + MGP_WSBEiJ_P0034603 Eif2b2 protein_coding protein_coding MGP_WSBEiJ_T0034604.1 MGP_WSBEiJ_G0019299.1 mouse_genomes_project 12 85294057 85300776 + MGP_WSBEiJ_P0034604 Eif2b2 protein_coding protein_coding MGP_WSBEiJ_T0034605.1 MGP_WSBEiJ_G0019299.1 mouse_genomes_project 12 85294059 85294494 + Eif2b2 protein_coding retained_intron MGP_WSBEiJ_T0034606.1 MGP_WSBEiJ_G0019299.1 mouse_genomes_project 12 85294090 85297439 + Eif2b2 protein_coding retained_intron MGP_WSBEiJ_T0034607.1 MGP_WSBEiJ_G0019299.1 mouse_genomes_project 12 85294126 85298101 + Eif2b2 protein_coding retained_intron MGP_WSBEiJ_T0034608.1 MGP_WSBEiJ_G0019299.1 mouse_genomes_project 12 85299137 85301130 + Eif2b2 protein_coding retained_intron MGP_WSBEiJ_T0098982.1 MGP_WSBEiJ_G0037645.1 mouse_genomes_project 12 42003265 42003394 + Gm26326 snoRNA snoRNA MGP_WSBEiJ_T0000836.1 MGP_WSBEiJ_G0000775.1 mouse_genomes_project 12 89586066 89587976 - TEC TEC MGP_WSBEiJ_T0099000.1 MGP_WSBEiJ_G0037663.1 mouse_genomes_project 12 77743871 77743992 + Gm24994 snoRNA snoRNA MGP_WSBEiJ_T0009641.1 MGP_WSBEiJ_G0007798.1 mouse_genomes_project 12 34806883 34806957 + Mir5099 miRNA miRNA MGP_WSBEiJ_T0034828.1 MGP_WSBEiJ_G0019359.1 mouse_genomes_project 12 100835705 100871235 - MGP_WSBEiJ_P0034828 Nrde2 protein_coding protein_coding MGP_WSBEiJ_T0000092.1 MGP_WSBEiJ_G0000072.1 mouse_genomes_project 12 116332088 116332399 - MGP_WSBEiJ_P0000092 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000093.1 MGP_WSBEiJ_G0000072.1 mouse_genomes_project 12 116332091 116332388 - MGP_WSBEiJ_P0000093 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000096.1 MGP_WSBEiJ_G0000075.1 mouse_genomes_project 12 116441777 116442317 - MGP_WSBEiJ_P0000096 Ighv1-7 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033546.1 MGP_WSBEiJ_G0018918.1 mouse_genomes_project 12 924807 952817 + MGP_WSBEiJ_P0033546 Dnajc27 protein_coding protein_coding MGP_WSBEiJ_T0033547.1 MGP_WSBEiJ_G0018918.1 mouse_genomes_project 12 924862 951409 + MGP_WSBEiJ_P0033547 Dnajc27 protein_coding protein_coding MGP_WSBEiJ_T0000130.1 MGP_WSBEiJ_G0000097.1 mouse_genomes_project 12 118083422 118083890 - MGP_WSBEiJ_P0000130 Ighv1-82 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000136.1 MGP_WSBEiJ_G0000097.1 mouse_genomes_project 12 118083422 118083715 - MGP_WSBEiJ_P0000136 Ighv1-82 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034851.1 MGP_WSBEiJ_G0019365.1 mouse_genomes_project 12 101677393 101799504 - MGP_WSBEiJ_P0034851 Ccdc88c protein_coding protein_coding MGP_WSBEiJ_T0034852.1 MGP_WSBEiJ_G0019365.1 mouse_genomes_project 12 101677393 101799504 - MGP_WSBEiJ_P0034852 Ccdc88c protein_coding protein_coding MGP_WSBEiJ_T0034354.1 MGP_WSBEiJ_G0019219.1 mouse_genomes_project 12 78452678 78471445 - MGP_WSBEiJ_P0034354 Atp6v1d protein_coding protein_coding MGP_WSBEiJ_T0012526.1 MGP_WSBEiJ_G0010656.1 mouse_genomes_project 12 48206510 48207505 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098998.1 MGP_WSBEiJ_G0037661.1 mouse_genomes_project 12 72501940 72502072 - Gm23910 snoRNA snoRNA MGP_WSBEiJ_T0034894.1 MGP_WSBEiJ_G0019379.1 mouse_genomes_project 12 103603952 103647834 - MGP_WSBEiJ_P0034894 Gm28051 protein_coding protein_coding MGP_WSBEiJ_T0009697.1 MGP_WSBEiJ_G0007854.1 mouse_genomes_project 12 111144018 111144095 + Mir882 miRNA miRNA MGP_WSBEiJ_T0097785.1 MGP_WSBEiJ_G0036448.1 mouse_genomes_project 12 101513055 101513161 - Gm25801 snRNA snRNA MGP_WSBEiJ_T0097786.1 MGP_WSBEiJ_G0036449.1 mouse_genomes_project 12 110321099 110321945 - Gm22079 snRNA snRNA MGP_WSBEiJ_T0009752.1 MGP_WSBEiJ_G0007909.1 mouse_genomes_project 12 118357804 118357860 - Gm23190 miRNA miRNA MGP_WSBEiJ_T0099016.1 MGP_WSBEiJ_G0037679.1 mouse_genomes_project 12 111106913 111106985 + DQ267100 snoRNA snoRNA MGP_WSBEiJ_T0000137.1 MGP_WSBEiJ_G0000103.1 mouse_genomes_project 12 118083422 118083901 - MGP_WSBEiJ_P0000137 IG_V_gene IG_V_gene MGP_WSBEiJ_T0099025.1 MGP_WSBEiJ_G0037688.1 mouse_genomes_project 12 111142621 111142696 + Gm23736 snoRNA snoRNA MGP_WSBEiJ_T0033967.1 MGP_WSBEiJ_G0019073.1 mouse_genomes_project 12 50152100 50206352 + MGP_WSBEiJ_P0033967 Ap4s1 protein_coding protein_coding MGP_WSBEiJ_T0009689.1 MGP_WSBEiJ_G0007846.1 mouse_genomes_project 12 111049120 111049262 + Mir434 miRNA miRNA MGP_WSBEiJ_T0034175.1 MGP_WSBEiJ_G0019154.1 mouse_genomes_project 12 69449231 69493959 - MGP_WSBEiJ_P0034175 Pygl protein_coding protein_coding MGP_WSBEiJ_T0034176.1 MGP_WSBEiJ_G0019154.1 mouse_genomes_project 12 69455904 69456347 - Pygl protein_coding processed_transcript MGP_WSBEiJ_T0034177.1 MGP_WSBEiJ_G0019154.1 mouse_genomes_project 12 69473751 69493988 - Pygl protein_coding retained_intron MGP_WSBEiJ_T0034178.1 MGP_WSBEiJ_G0019154.1 mouse_genomes_project 12 69479514 69493721 - Pygl protein_coding processed_transcript MGP_WSBEiJ_T0016715.1 MGP_WSBEiJ_G0014654.1 mouse_genomes_project 12 102762270 102764368 + Gm20036 processed_transcript processed_transcript MGP_WSBEiJ_T0009715.1 MGP_WSBEiJ_G0007872.1 mouse_genomes_project 12 111185031 111185117 + Mir376c miRNA miRNA MGP_WSBEiJ_T0006343.1 MGP_WSBEiJ_G0005284.1 mouse_genomes_project 12 83533701 83536099 + lincRNA lincRNA MGP_WSBEiJ_T0011144.1 MGP_WSBEiJ_G0009301.1 mouse_genomes_project 12 111059652 111059750 + Gm27350 misc_RNA misc_RNA MGP_WSBEiJ_T0006311.1 MGP_WSBEiJ_G0005260.1 mouse_genomes_project 12 28166862 28228329 - 2310016D03Rik lincRNA lincRNA MGP_WSBEiJ_T0006321.1 MGP_WSBEiJ_G0005268.1 mouse_genomes_project 12 47844474 47848346 - 1810007C17Rik lincRNA lincRNA MGP_WSBEiJ_T0033617.1 MGP_WSBEiJ_G0018943.1 mouse_genomes_project 12 6019411 6041793 + MGP_WSBEiJ_P0033617 Laptm4a protein_coding protein_coding MGP_WSBEiJ_T0000030.1 MGP_WSBEiJ_G0000024.1 mouse_genomes_project 12 115206276 115206305 - IG_D_pseudogene IG_D_pseudogene MGP_WSBEiJ_T0034983.1 MGP_WSBEiJ_G0019415.1 mouse_genomes_project 12 105256202 105317524 + MGP_WSBEiJ_P0034983 protein_coding protein_coding MGP_WSBEiJ_T0034286.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75308806 75373024 + MGP_WSBEiJ_P0034286 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034287.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75308989 75613121 + MGP_WSBEiJ_P0034287 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034288.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75308989 75613137 + MGP_WSBEiJ_P0034288 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034289.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75308994 75384670 + Syne2 protein_coding retained_intron MGP_WSBEiJ_T0034290.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75309000 75402493 + MGP_WSBEiJ_P0034290 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034291.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75309021 75399505 + Syne2 protein_coding retained_intron MGP_WSBEiJ_T0034292.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75343596 75372846 + MGP_WSBEiJ_P0034292 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034293.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75402833 75407499 + Syne2 protein_coding retained_intron MGP_WSBEiJ_T0034294.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75522306 75527829 + MGP_WSBEiJ_P0034294 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034295.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75531620 75613131 + MGP_WSBEiJ_P0034295 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034296.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75549499 75613121 + MGP_WSBEiJ_P0034296 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034297.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75560622 75567466 + Syne2 protein_coding retained_intron MGP_WSBEiJ_T0034298.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75572933 75596393 + MGP_WSBEiJ_P0034298 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034299.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75583482 75597003 + MGP_WSBEiJ_P0034299 Syne2 protein_coding protein_coding MGP_WSBEiJ_T0034300.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75583765 75599937 + MGP_WSBEiJ_P0034300 Syne2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034301.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75589614 75613137 + MGP_WSBEiJ_P0034301 Syne2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034302.1 MGP_WSBEiJ_G0019197.1 mouse_genomes_project 12 75602855 75608213 + Syne2 protein_coding retained_intron MGP_WSBEiJ_T0034460.1 MGP_WSBEiJ_G0019256.1 mouse_genomes_project 12 83082062 83228029 - MGP_WSBEiJ_P0034460 Dpf3 protein_coding protein_coding MGP_WSBEiJ_T0034461.1 MGP_WSBEiJ_G0019256.1 mouse_genomes_project 12 83082068 83383694 - MGP_WSBEiJ_P0034461 Dpf3 protein_coding protein_coding MGP_WSBEiJ_T0034462.1 MGP_WSBEiJ_G0019256.1 mouse_genomes_project 12 83131696 83166126 - MGP_WSBEiJ_P0034462 Dpf3 protein_coding protein_coding MGP_WSBEiJ_T0034463.1 MGP_WSBEiJ_G0019256.1 mouse_genomes_project 12 83141524 83383686 - MGP_WSBEiJ_P0034463 Dpf3 protein_coding protein_coding MGP_WSBEiJ_T0034464.1 MGP_WSBEiJ_G0019256.1 mouse_genomes_project 12 83141734 83383686 - MGP_WSBEiJ_P0034464 Dpf3 protein_coding protein_coding MGP_WSBEiJ_T0034465.1 MGP_WSBEiJ_G0019256.1 mouse_genomes_project 12 83141851 83329353 - MGP_WSBEiJ_P0034465 Dpf3 protein_coding protein_coding MGP_WSBEiJ_T0000035.1 MGP_WSBEiJ_G0000029.1 mouse_genomes_project 12 115161181 115161229 - MGP_WSBEiJ_P0000035 Ighj2 IG_J_gene IG_J_gene MGP_WSBEiJ_T0000036.1 MGP_WSBEiJ_G0000029.1 mouse_genomes_project 12 115161227 115161281 - Ighj2 IG_J_gene processed_transcript MGP_WSBEiJ_T0033562.1 MGP_WSBEiJ_G0018921.1 mouse_genomes_project 12 1097071 1207057 - MGP_WSBEiJ_P0033562 Ncoa1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033879.1 MGP_WSBEiJ_G0019042.1 mouse_genomes_project 12 34162894 34179045 - MGP_WSBEiJ_P0033879 Lrrc72 protein_coding protein_coding MGP_WSBEiJ_T0033880.1 MGP_WSBEiJ_G0019042.1 mouse_genomes_project 12 34164110 34218040 - MGP_WSBEiJ_P0033880 Lrrc72 protein_coding protein_coding MGP_WSBEiJ_T0033881.1 MGP_WSBEiJ_G0019042.1 mouse_genomes_project 12 34166830 34179061 - Lrrc72 protein_coding retained_intron MGP_WSBEiJ_T0034440.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82432306 82904194 + MGP_WSBEiJ_P0034440 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034441.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82462560 82954144 + MGP_WSBEiJ_P0034441 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034442.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82462569 83023480 + MGP_WSBEiJ_P0034442 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034443.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82462673 83024321 + MGP_WSBEiJ_P0034443 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034444.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82463134 83024877 + MGP_WSBEiJ_P0034444 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034445.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82463134 83027582 + MGP_WSBEiJ_P0034445 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034446.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82463207 83023855 + MGP_WSBEiJ_P0034446 Rgs6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034447.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82463222 82923667 + MGP_WSBEiJ_P0034447 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034448.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82463270 82907969 + MGP_WSBEiJ_P0034448 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034449.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82463484 82907907 + MGP_WSBEiJ_P0034449 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034450.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82463660 82464628 + Rgs6 protein_coding retained_intron MGP_WSBEiJ_T0034451.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82494666 83003283 + MGP_WSBEiJ_P0034451 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034452.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82494666 83023480 + MGP_WSBEiJ_P0034452 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034453.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82494666 83003283 + MGP_WSBEiJ_P0034453 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034454.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82494666 83023480 + MGP_WSBEiJ_P0034454 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034455.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82494666 82999382 + MGP_WSBEiJ_P0034455 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034456.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82494666 83003406 + MGP_WSBEiJ_P0034456 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034457.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82903591 82904722 + Rgs6 protein_coding retained_intron MGP_WSBEiJ_T0034458.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82970997 83023716 + MGP_WSBEiJ_P0034458 Rgs6 protein_coding protein_coding MGP_WSBEiJ_T0034459.1 MGP_WSBEiJ_G0019255.1 mouse_genomes_project 12 82981858 83003235 + Rgs6 protein_coding retained_intron MGP_WSBEiJ_T0003355.1 MGP_WSBEiJ_G0003084.1 mouse_genomes_project 12 119353348 119463705 - Gm5441 antisense antisense MGP_WSBEiJ_T0003356.1 MGP_WSBEiJ_G0003084.1 mouse_genomes_project 12 119401239 119463715 - Gm5441 antisense antisense MGP_WSBEiJ_T0000234.1 MGP_WSBEiJ_G0000182.1 mouse_genomes_project 12 115639463 115639779 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0098977.1 MGP_WSBEiJ_G0037640.1 mouse_genomes_project 12 32791194 32791326 + Gm24429 snoRNA snoRNA MGP_WSBEiJ_T0034784.1 MGP_WSBEiJ_G0019347.1 mouse_genomes_project 12 98888568 98897753 + MGP_WSBEiJ_P0034784 Gpr65 protein_coding protein_coding MGP_WSBEiJ_T0035061.1 MGP_WSBEiJ_G0019447.1 mouse_genomes_project 12 109995393 110129109 + MGP_WSBEiJ_P0035061 Evl protein_coding protein_coding MGP_WSBEiJ_T0035062.1 MGP_WSBEiJ_G0019447.1 mouse_genomes_project 12 109995393 110129109 + MGP_WSBEiJ_P0035062 Evl protein_coding protein_coding MGP_WSBEiJ_T0035063.1 MGP_WSBEiJ_G0019447.1 mouse_genomes_project 12 110046465 110129109 + MGP_WSBEiJ_P0035063 Evl protein_coding protein_coding MGP_WSBEiJ_T0035064.1 MGP_WSBEiJ_G0019447.1 mouse_genomes_project 12 110076418 110129109 + MGP_WSBEiJ_P0035064 Evl protein_coding protein_coding MGP_WSBEiJ_T0034663.1 MGP_WSBEiJ_G0019316.1 mouse_genomes_project 12 86858249 86872456 + MGP_WSBEiJ_P0034663 Vash1 protein_coding protein_coding MGP_WSBEiJ_T0034099.1 MGP_WSBEiJ_G0019125.1 mouse_genomes_project 12 64032573 64059612 + MGP_WSBEiJ_P0034099 Prpf39 protein_coding protein_coding MGP_WSBEiJ_T0034100.1 MGP_WSBEiJ_G0019125.1 mouse_genomes_project 12 64032606 64059612 + MGP_WSBEiJ_P0034100 Prpf39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035100.1 MGP_WSBEiJ_G0019459.1 mouse_genomes_project 12 112103119 112171922 + MGP_WSBEiJ_P0035100 Dync1h1 protein_coding protein_coding MGP_WSBEiJ_T0035101.1 MGP_WSBEiJ_G0019459.1 mouse_genomes_project 12 112144604 112145616 + Dync1h1 protein_coding retained_intron MGP_WSBEiJ_T0035102.1 MGP_WSBEiJ_G0019459.1 mouse_genomes_project 12 112158127 112162141 + MGP_WSBEiJ_P0035102 Dync1h1 protein_coding protein_coding MGP_WSBEiJ_T0035103.1 MGP_WSBEiJ_G0019459.1 mouse_genomes_project 12 112160378 112161317 + Dync1h1 protein_coding retained_intron MGP_WSBEiJ_T0035104.1 MGP_WSBEiJ_G0019459.1 mouse_genomes_project 12 112163065 112163802 + Dync1h1 protein_coding retained_intron MGP_WSBEiJ_T0035105.1 MGP_WSBEiJ_G0019459.1 mouse_genomes_project 12 112165615 112166447 + Dync1h1 protein_coding retained_intron MGP_WSBEiJ_T0035106.1 MGP_WSBEiJ_G0019459.1 mouse_genomes_project 12 112165910 112166478 + Dync1h1 protein_coding retained_intron MGP_WSBEiJ_T0035107.1 MGP_WSBEiJ_G0019459.1 mouse_genomes_project 12 112168165 112169851 + Dync1h1 protein_coding retained_intron MGP_WSBEiJ_T0000264.1 MGP_WSBEiJ_G0000212.1 mouse_genomes_project 12 117033950 117034380 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0033640.1 MGP_WSBEiJ_G0018956.1 mouse_genomes_project 12 8638688 8645939 + MGP_WSBEiJ_P0033640 Rad51ap2 protein_coding protein_coding MGP_WSBEiJ_T0034252.1 MGP_WSBEiJ_G0019179.1 mouse_genomes_project 12 72456788 72470662 - MGP_WSBEiJ_P0034252 Six4 protein_coding protein_coding MGP_WSBEiJ_T0034253.1 MGP_WSBEiJ_G0019179.1 mouse_genomes_project 12 72460636 72470693 - MGP_WSBEiJ_P0034253 Six4 protein_coding protein_coding MGP_WSBEiJ_T0034513.1 MGP_WSBEiJ_G0019271.1 mouse_genomes_project 12 84050193 84061660 + MGP_WSBEiJ_P0034513 Acot6 protein_coding protein_coding MGP_WSBEiJ_T0000265.1 MGP_WSBEiJ_G0000213.1 mouse_genomes_project 12 117672148 117672442 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0035199.1 MGP_WSBEiJ_G0019490.1 mouse_genomes_project 12 113592426 113594631 - MGP_WSBEiJ_P0035199 Rd3l protein_coding protein_coding MGP_WSBEiJ_T0035200.1 MGP_WSBEiJ_G0019490.1 mouse_genomes_project 12 113592427 113593460 - MGP_WSBEiJ_P0035200 Rd3l protein_coding protein_coding MGP_WSBEiJ_T0035201.1 MGP_WSBEiJ_G0019490.1 mouse_genomes_project 12 113592460 113594369 - MGP_WSBEiJ_P0035201 Rd3l protein_coding protein_coding MGP_WSBEiJ_T0035202.1 MGP_WSBEiJ_G0019490.1 mouse_genomes_project 12 113592504 113593787 - MGP_WSBEiJ_P0035202 Rd3l protein_coding protein_coding MGP_WSBEiJ_T0035203.1 MGP_WSBEiJ_G0019490.1 mouse_genomes_project 12 113592506 113594416 - MGP_WSBEiJ_P0035203 Rd3l protein_coding protein_coding MGP_WSBEiJ_T0012555.1 MGP_WSBEiJ_G0010685.1 mouse_genomes_project 12 91867960 91868750 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006379.1 MGP_WSBEiJ_G0005315.1 mouse_genomes_project 12 109973927 109996183 - Gm16596 lincRNA lincRNA MGP_WSBEiJ_T0034119.1 MGP_WSBEiJ_G0019131.1 mouse_genomes_project 12 68334846 68336311 - MGP_WSBEiJ_P0034119 Rps29 protein_coding protein_coding MGP_WSBEiJ_T0034120.1 MGP_WSBEiJ_G0019131.1 mouse_genomes_project 12 68335482 68336179 - Rps29 protein_coding retained_intron MGP_WSBEiJ_T0000228.1 MGP_WSBEiJ_G0000176.1 mouse_genomes_project 12 115467733 115468635 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0099015.1 MGP_WSBEiJ_G0037678.1 mouse_genomes_project 12 111102567 111102641 + Gm24895 snoRNA snoRNA MGP_WSBEiJ_T0035166.1 MGP_WSBEiJ_G0019481.1 mouse_genomes_project 12 113269789 113277506 + MGP_WSBEiJ_P0035166 Trmt61a protein_coding protein_coding MGP_WSBEiJ_T0035167.1 MGP_WSBEiJ_G0019481.1 mouse_genomes_project 12 113269789 113277506 + MGP_WSBEiJ_P0035167 Trmt61a protein_coding protein_coding MGP_WSBEiJ_T0006392.1 MGP_WSBEiJ_G0005318.1 mouse_genomes_project 12 111023460 111026556 - Gm26906 lincRNA lincRNA MGP_WSBEiJ_T0000223.1 MGP_WSBEiJ_G0000171.1 mouse_genomes_project 12 115309539 115310008 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0098992.1 MGP_WSBEiJ_G0037655.1 mouse_genomes_project 12 63710770 63710901 + Gm24066 snoRNA snoRNA MGP_WSBEiJ_T0012522.1 MGP_WSBEiJ_G0010652.1 mouse_genomes_project 12 13042708 13043601 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009632.1 MGP_WSBEiJ_G0007789.1 mouse_genomes_project 12 13120504 13120612 - Mir6387 miRNA miRNA MGP_WSBEiJ_T0034694.1 MGP_WSBEiJ_G0019326.1 mouse_genomes_project 12 87420894 87454928 - MGP_WSBEiJ_P0034694 Tmed8 protein_coding protein_coding MGP_WSBEiJ_T0097757.1 MGP_WSBEiJ_G0036420.1 mouse_genomes_project 12 47418813 47418920 + Gm26454 snRNA snRNA MGP_WSBEiJ_T0097278.1 MGP_WSBEiJ_G0035956.1 mouse_genomes_project 12 55344571 55348503 + C87198 sense_intronic sense_intronic MGP_WSBEiJ_T0097279.1 MGP_WSBEiJ_G0035956.1 mouse_genomes_project 12 55344581 55348039 + C87198 sense_intronic sense_intronic MGP_WSBEiJ_T0000256.1 MGP_WSBEiJ_G0000204.1 mouse_genomes_project 12 116841227 116841654 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0035049.1 MGP_WSBEiJ_G0019442.1 mouse_genomes_project 12 109576551 109603296 + MGP_WSBEiJ_P0035049 Ccnk protein_coding unknown_likely_coding MGP_WSBEiJ_T0035050.1 MGP_WSBEiJ_G0019442.1 mouse_genomes_project 12 109576610 109603292 + MGP_WSBEiJ_P0035050 Ccnk protein_coding protein_coding MGP_WSBEiJ_T0097759.1 MGP_WSBEiJ_G0036422.1 mouse_genomes_project 12 51100622 51100729 + Gm24859 snRNA snRNA MGP_WSBEiJ_T0099009.1 MGP_WSBEiJ_G0037672.1 mouse_genomes_project 12 107497897 107498029 + Gm24986 snoRNA snoRNA MGP_WSBEiJ_T0035248.1 MGP_WSBEiJ_G0019511.1 mouse_genomes_project 12 114669684 114671632 + MGP_WSBEiJ_P0035248 protein_coding protein_coding MGP_WSBEiJ_T0098966.1 MGP_WSBEiJ_G0037629.1 mouse_genomes_project 12 9213537 9213666 + Gm25610 snoRNA snoRNA MGP_WSBEiJ_T0034898.1 MGP_WSBEiJ_G0019382.1 mouse_genomes_project 12 103631419 103635221 + MGP_WSBEiJ_P0034898 Tmem251 protein_coding protein_coding MGP_WSBEiJ_T0012530.1 MGP_WSBEiJ_G0010660.1 mouse_genomes_project 12 55114750 55114981 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012575.1 MGP_WSBEiJ_G0010705.1 mouse_genomes_project 12 115123346 115123800 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009733.1 MGP_WSBEiJ_G0007890.1 mouse_genomes_project 12 111201448 111201527 + Mir496a miRNA miRNA MGP_WSBEiJ_T0012518.1 MGP_WSBEiJ_G0010648.1 mouse_genomes_project 12 5880409 5882786 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000009.1 MGP_WSBEiJ_G0000007.1 mouse_genomes_project 12 115052064 115057345 - MGP_WSBEiJ_P0000009 Ighg1 IG_C_gene IG_C_gene MGP_WSBEiJ_T0000010.1 MGP_WSBEiJ_G0000007.1 mouse_genomes_project 12 115055693 115057345 - MGP_WSBEiJ_P0000010 Ighg1 IG_C_gene IG_C_gene MGP_WSBEiJ_T0034017.1 MGP_WSBEiJ_G0019096.1 mouse_genomes_project 12 54197028 54201140 - MGP_WSBEiJ_P0034017 Nfkbia protein_coding protein_coding MGP_WSBEiJ_T0099026.1 MGP_WSBEiJ_G0037689.1 mouse_genomes_project 12 111143340 111143415 + AF357341 snoRNA snoRNA MGP_WSBEiJ_T0033870.1 MGP_WSBEiJ_G0019037.1 mouse_genomes_project 12 33859474 33884148 + MGP_WSBEiJ_P0033870 Agr3 protein_coding protein_coding MGP_WSBEiJ_T0033871.1 MGP_WSBEiJ_G0019037.1 mouse_genomes_project 12 33859476 33862226 + MGP_WSBEiJ_P0033871 Agr3 protein_coding protein_coding MGP_WSBEiJ_T0034121.1 MGP_WSBEiJ_G0019132.1 mouse_genomes_project 12 68348869 68359677 + MGP_WSBEiJ_P0034121 Lrr1 protein_coding protein_coding MGP_WSBEiJ_T0034308.1 MGP_WSBEiJ_G0019200.1 mouse_genomes_project 12 75769549 75837250 + MGP_WSBEiJ_P0034308 Mthfd1 protein_coding protein_coding MGP_WSBEiJ_T0034320.1 MGP_WSBEiJ_G0019205.1 mouse_genomes_project 12 75947323 75968812 + MGP_WSBEiJ_P0034320 Ppp1r36 protein_coding protein_coding MGP_WSBEiJ_T0034149.1 MGP_WSBEiJ_G0019146.1 mouse_genomes_project 12 68945069 68974595 + MGP_WSBEiJ_P0034149 Atp5s protein_coding protein_coding MGP_WSBEiJ_T0034164.1 MGP_WSBEiJ_G0019152.1 mouse_genomes_project 12 69261443 69356518 - MGP_WSBEiJ_P0034164 Nin protein_coding protein_coding MGP_WSBEiJ_T0034165.1 MGP_WSBEiJ_G0019152.1 mouse_genomes_project 12 69268789 69356539 - MGP_WSBEiJ_P0034165 Nin protein_coding protein_coding MGP_WSBEiJ_T0034166.1 MGP_WSBEiJ_G0019152.1 mouse_genomes_project 12 69268790 69366429 - MGP_WSBEiJ_P0034166 Nin protein_coding protein_coding MGP_WSBEiJ_T0034167.1 MGP_WSBEiJ_G0019152.1 mouse_genomes_project 12 69268810 69366424 - MGP_WSBEiJ_P0034167 Nin protein_coding protein_coding MGP_WSBEiJ_T0034168.1 MGP_WSBEiJ_G0019152.1 mouse_genomes_project 12 69275414 69366017 - MGP_WSBEiJ_P0034168 Nin protein_coding unknown_likely_coding MGP_WSBEiJ_T0034587.1 MGP_WSBEiJ_G0019293.1 mouse_genomes_project 12 85025143 85037331 + MGP_WSBEiJ_P0034587 Fcf1 protein_coding protein_coding MGP_WSBEiJ_T0034588.1 MGP_WSBEiJ_G0019293.1 mouse_genomes_project 12 85025227 85037319 + MGP_WSBEiJ_P0034588 Fcf1 protein_coding protein_coding MGP_WSBEiJ_T0034589.1 MGP_WSBEiJ_G0019293.1 mouse_genomes_project 12 85034236 85037325 + Fcf1 protein_coding retained_intron MGP_WSBEiJ_T0097756.1 MGP_WSBEiJ_G0036419.1 mouse_genomes_project 12 33373512 33373619 + Gm26071 snRNA snRNA MGP_WSBEiJ_T0035039.1 MGP_WSBEiJ_G0019439.1 mouse_genomes_project 12 108843678 108844683 + MGP_WSBEiJ_P0035039 3110018I06Rik protein_coding protein_coding MGP_WSBEiJ_T0100511.1 MGP_WSBEiJ_G0038969.1 mouse_genomes_project 12 104632864 104637958 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000834.1 MGP_WSBEiJ_G0000773.1 mouse_genomes_project 12 85160479 85162049 - TEC TEC MGP_WSBEiJ_T0033598.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5754265 5841129 + MGP_WSBEiJ_P0033598 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033599.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5754265 5840002 + MGP_WSBEiJ_P0033599 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033600.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5754276 5838868 + MGP_WSBEiJ_P0033600 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033601.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5754355 5841109 + MGP_WSBEiJ_P0033601 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033602.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5754406 5841105 + MGP_WSBEiJ_P0033602 Pum2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033603.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5754658 5841129 + MGP_WSBEiJ_P0033603 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033604.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5754713 5800065 + MGP_WSBEiJ_P0033604 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033605.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5754742 5799834 + MGP_WSBEiJ_P0033605 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033606.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5757506 5795920 + MGP_WSBEiJ_P0033606 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033607.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5780019 5841102 + MGP_WSBEiJ_P0033607 Pum2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033608.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5783605 5837304 + MGP_WSBEiJ_P0033608 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033609.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5783605 5838576 + MGP_WSBEiJ_P0033609 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033610.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5783610 5800348 + MGP_WSBEiJ_P0033610 Pum2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033611.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5796655 5808233 + MGP_WSBEiJ_P0033611 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033612.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5815581 5835539 + MGP_WSBEiJ_P0033612 Pum2 protein_coding protein_coding MGP_WSBEiJ_T0033613.1 MGP_WSBEiJ_G0018941.1 mouse_genomes_project 12 5829926 5830850 + Pum2 protein_coding retained_intron MGP_WSBEiJ_T0099012.1 MGP_WSBEiJ_G0037675.1 mouse_genomes_project 12 111092483 111092556 + AF357425 snoRNA snoRNA MGP_WSBEiJ_T0034980.1 MGP_WSBEiJ_G0019413.1 mouse_genomes_project 12 105256177 105317529 + MGP_WSBEiJ_P0034980 protein_coding protein_coding MGP_WSBEiJ_T0033884.1 MGP_WSBEiJ_G0019045.1 mouse_genomes_project 12 34348233 34657649 + MGP_WSBEiJ_P0033884 Ispd protein_coding protein_coding MGP_WSBEiJ_T0033705.1 MGP_WSBEiJ_G0018977.1 mouse_genomes_project 12 18724785 18757062 + MGP_WSBEiJ_P0033705 Cpsf3 protein_coding protein_coding MGP_WSBEiJ_T0009744.1 MGP_WSBEiJ_G0007901.1 mouse_genomes_project 12 113717610 113717695 + Mir3073a miRNA miRNA MGP_WSBEiJ_T0033983.1 MGP_WSBEiJ_G0019083.1 mouse_genomes_project 12 53213822 53225752 - MGP_WSBEiJ_P0033983 Sptssa protein_coding protein_coding MGP_WSBEiJ_T0009743.1 MGP_WSBEiJ_G0007900.1 mouse_genomes_project 12 112181224 112181327 + Gm27299 miRNA miRNA MGP_WSBEiJ_T0033885.1 MGP_WSBEiJ_G0019046.1 mouse_genomes_project 12 35106602 35175417 + MGP_WSBEiJ_P0033885 Meox2 protein_coding protein_coding MGP_WSBEiJ_T0003347.1 MGP_WSBEiJ_G0003077.1 mouse_genomes_project 12 102990609 102993452 - Gm16339 antisense antisense MGP_WSBEiJ_T0011139.1 MGP_WSBEiJ_G0009296.1 mouse_genomes_project 12 96814661 96814958 - Gm26480 misc_RNA misc_RNA MGP_WSBEiJ_T0097770.1 MGP_WSBEiJ_G0036433.1 mouse_genomes_project 12 66725381 66725567 + Gm26256 snRNA snRNA MGP_WSBEiJ_T0034013.1 MGP_WSBEiJ_G0019095.1 mouse_genomes_project 12 54083274 54124205 + MGP_WSBEiJ_P0034013 Psma6 protein_coding protein_coding MGP_WSBEiJ_T0034014.1 MGP_WSBEiJ_G0019095.1 mouse_genomes_project 12 54099605 54124349 + MGP_WSBEiJ_P0034014 Psma6 protein_coding protein_coding MGP_WSBEiJ_T0034015.1 MGP_WSBEiJ_G0019095.1 mouse_genomes_project 12 54099625 54124336 + MGP_WSBEiJ_P0034015 Psma6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034016.1 MGP_WSBEiJ_G0019095.1 mouse_genomes_project 12 54109320 54116082 + Psma6 protein_coding processed_transcript MGP_WSBEiJ_T0033587.1 MGP_WSBEiJ_G0018935.1 mouse_genomes_project 12 4998070 5011900 + MGP_WSBEiJ_P0033587 Apob protein_coding protein_coding MGP_WSBEiJ_T0033588.1 MGP_WSBEiJ_G0018935.1 mouse_genomes_project 12 4998070 5043620 + MGP_WSBEiJ_P0033588 Apob protein_coding protein_coding MGP_WSBEiJ_T0033589.1 MGP_WSBEiJ_G0018935.1 mouse_genomes_project 12 4998201 5043285 + MGP_WSBEiJ_P0033589 Apob protein_coding protein_coding MGP_WSBEiJ_T0033590.1 MGP_WSBEiJ_G0018935.1 mouse_genomes_project 12 5038010 5043620 + MGP_WSBEiJ_P0033590 Apob protein_coding protein_coding MGP_WSBEiJ_T0034110.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 65512824 66322111 - MGP_WSBEiJ_P0034110 Mdga2 protein_coding protein_coding MGP_WSBEiJ_T0034111.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 65513892 65514315 - MGP_WSBEiJ_P0034111 Mdga2 protein_coding protein_coding MGP_WSBEiJ_T0034112.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 65514438 66320799 - MGP_WSBEiJ_P0034112 Mdga2 protein_coding protein_coding MGP_WSBEiJ_T0034113.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 65514725 66320780 - MGP_WSBEiJ_P0034113 Mdga2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034114.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 65524593 65530251 - Mdga2 protein_coding retained_intron MGP_WSBEiJ_T0034115.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 65674863 65685369 - Mdga2 protein_coding processed_transcript MGP_WSBEiJ_T0034116.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 65750138 65890551 - Mdga2 protein_coding processed_transcript MGP_WSBEiJ_T0034117.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 66294345 66322104 - Mdga2 protein_coding processed_transcript MGP_WSBEiJ_T0034118.1 MGP_WSBEiJ_G0019130.1 mouse_genomes_project 12 66309858 66321943 - Mdga2 protein_coding processed_transcript MGP_WSBEiJ_T0097754.1 MGP_WSBEiJ_G0036417.1 mouse_genomes_project 12 18799007 18799106 + Gm22766 snRNA snRNA MGP_WSBEiJ_T0034004.1 MGP_WSBEiJ_G0019091.1 mouse_genomes_project 12 53945886 53965659 + MGP_WSBEiJ_P0034004 protein_coding protein_coding MGP_WSBEiJ_T0034283.1 MGP_WSBEiJ_G0019195.1 mouse_genomes_project 12 75102114 75142643 - MGP_WSBEiJ_P0034283 Wdr89 protein_coding protein_coding MGP_WSBEiJ_T0034284.1 MGP_WSBEiJ_G0019195.1 mouse_genomes_project 12 75102118 75142633 - MGP_WSBEiJ_P0034284 Wdr89 protein_coding protein_coding MGP_WSBEiJ_T0099024.1 MGP_WSBEiJ_G0037687.1 mouse_genomes_project 12 111141766 111141835 + AF357428 snoRNA snoRNA MGP_WSBEiJ_T0035216.1 MGP_WSBEiJ_G0019497.1 mouse_genomes_project 12 114269280 114292398 + MGP_WSBEiJ_P0035216 Adssl1 protein_coding protein_coding MGP_WSBEiJ_T0035217.1 MGP_WSBEiJ_G0019497.1 mouse_genomes_project 12 114269282 114292413 + MGP_WSBEiJ_P0035217 Adssl1 protein_coding protein_coding MGP_WSBEiJ_T0012581.1 MGP_WSBEiJ_G0010711.1 mouse_genomes_project 12 117723641 117724789 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016697.1 MGP_WSBEiJ_G0014644.1 mouse_genomes_project 12 30971082 31010602 - F730043M19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016698.1 MGP_WSBEiJ_G0014644.1 mouse_genomes_project 12 30986013 31009925 - F730043M19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016699.1 MGP_WSBEiJ_G0014644.1 mouse_genomes_project 12 30994038 31010602 - F730043M19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016700.1 MGP_WSBEiJ_G0014644.1 mouse_genomes_project 12 30997562 31010613 - F730043M19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016701.1 MGP_WSBEiJ_G0014644.1 mouse_genomes_project 12 30998296 31002660 - F730043M19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016702.1 MGP_WSBEiJ_G0014644.1 mouse_genomes_project 12 31010160 31010612 - F730043M19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0000235.1 MGP_WSBEiJ_G0000183.1 mouse_genomes_project 12 115705921 115706365 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0033571.1 MGP_WSBEiJ_G0018928.1 mouse_genomes_project 12 1694807 1706396 + MGP_WSBEiJ_P0033571 Sf3b6 protein_coding protein_coding MGP_WSBEiJ_T0034410.1 MGP_WSBEiJ_G0019245.1 mouse_genomes_project 12 81136221 81333685 - MGP_WSBEiJ_P0034410 Gm20498 protein_coding protein_coding MGP_WSBEiJ_T0034413.1 MGP_WSBEiJ_G0019245.1 mouse_genomes_project 12 81264211 81333662 - MGP_WSBEiJ_P0034413 Gm20498 protein_coding protein_coding MGP_WSBEiJ_T0034420.1 MGP_WSBEiJ_G0019245.1 mouse_genomes_project 12 81268163 81333657 - MGP_WSBEiJ_P0034420 Gm20498 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034421.1 MGP_WSBEiJ_G0019245.1 mouse_genomes_project 12 81268199 81333541 - Gm20498 protein_coding processed_transcript MGP_WSBEiJ_T0034422.1 MGP_WSBEiJ_G0019245.1 mouse_genomes_project 12 81268221 81333657 - Gm20498 protein_coding processed_transcript MGP_WSBEiJ_T0034424.1 MGP_WSBEiJ_G0019245.1 mouse_genomes_project 12 81275842 81333657 - Gm20498 protein_coding processed_transcript MGP_WSBEiJ_T0009726.1 MGP_WSBEiJ_G0007883.1 mouse_genomes_project 12 111191660 111191738 + Mir544 miRNA miRNA MGP_WSBEiJ_T0033936.1 MGP_WSBEiJ_G0019060.1 mouse_genomes_project 12 42508941 42564354 + MGP_WSBEiJ_P0033936 Pnpla8 protein_coding protein_coding MGP_WSBEiJ_T0033937.1 MGP_WSBEiJ_G0019060.1 mouse_genomes_project 12 42515779 42529009 + MGP_WSBEiJ_P0033937 Pnpla8 protein_coding protein_coding MGP_WSBEiJ_T0033938.1 MGP_WSBEiJ_G0019060.1 mouse_genomes_project 12 42528691 42560257 + MGP_WSBEiJ_P0033938 Pnpla8 protein_coding protein_coding MGP_WSBEiJ_T0033939.1 MGP_WSBEiJ_G0019060.1 mouse_genomes_project 12 42542345 42559758 + MGP_WSBEiJ_P0033939 Pnpla8 protein_coding protein_coding MGP_WSBEiJ_T0006304.1 MGP_WSBEiJ_G0005256.1 mouse_genomes_project 12 13136643 13204006 + Gm5432 lincRNA lincRNA MGP_WSBEiJ_T0009690.1 MGP_WSBEiJ_G0007847.1 mouse_genomes_project 12 111049420 111049495 + Mir432 miRNA miRNA MGP_WSBEiJ_T0034762.1 MGP_WSBEiJ_G0019342.1 mouse_genomes_project 12 91958196 91991447 - MGP_WSBEiJ_P0034762 Gtf2a1 protein_coding protein_coding MGP_WSBEiJ_T0000826.1 MGP_WSBEiJ_G0000765.1 mouse_genomes_project 12 45488712 45489138 + TEC TEC MGP_WSBEiJ_T0011131.1 MGP_WSBEiJ_G0009288.1 mouse_genomes_project 12 60797911 60798224 + Gm23213 misc_RNA misc_RNA MGP_WSBEiJ_T0033569.1 MGP_WSBEiJ_G0018927.1 mouse_genomes_project 12 1648748 1657687 + MGP_WSBEiJ_P0033569 Pfn4 protein_coding protein_coding MGP_WSBEiJ_T0033570.1 MGP_WSBEiJ_G0018927.1 mouse_genomes_project 12 1648908 1657659 + MGP_WSBEiJ_P0033570 Pfn4 protein_coding protein_coding MGP_WSBEiJ_T0034565.1 MGP_WSBEiJ_G0019286.1 mouse_genomes_project 12 84666915 84680191 + MGP_WSBEiJ_P0034565 Vrtn protein_coding protein_coding MGP_WSBEiJ_T0034566.1 MGP_WSBEiJ_G0019286.1 mouse_genomes_project 12 84668451 84680191 + MGP_WSBEiJ_P0034566 Vrtn protein_coding protein_coding MGP_WSBEiJ_T0034567.1 MGP_WSBEiJ_G0019286.1 mouse_genomes_project 12 84668792 84680191 + MGP_WSBEiJ_P0034567 Vrtn protein_coding protein_coding MGP_WSBEiJ_T0035312.1 MGP_WSBEiJ_G0019530.1 mouse_genomes_project 12 121068572 121183375 - MGP_WSBEiJ_P0035312 Abcb5 protein_coding protein_coding MGP_WSBEiJ_T0035313.1 MGP_WSBEiJ_G0019530.1 mouse_genomes_project 12 121089602 121094222 - Abcb5 protein_coding retained_intron MGP_WSBEiJ_T0035314.1 MGP_WSBEiJ_G0019530.1 mouse_genomes_project 12 121090075 121124380 - Abcb5 protein_coding processed_transcript MGP_WSBEiJ_T0033814.1 MGP_WSBEiJ_G0019017.1 mouse_genomes_project 12 29442709 29457464 - MGP_WSBEiJ_P0033814 Dus4l protein_coding protein_coding MGP_WSBEiJ_T0099030.1 MGP_WSBEiJ_G0037693.1 mouse_genomes_project 12 111148504 111148576 + Gm25854 snoRNA snoRNA MGP_WSBEiJ_T0034844.1 MGP_WSBEiJ_G0019364.1 mouse_genomes_project 12 101634990 101669048 - MGP_WSBEiJ_P0034844 Gpr68 protein_coding protein_coding MGP_WSBEiJ_T0034845.1 MGP_WSBEiJ_G0019364.1 mouse_genomes_project 12 101634993 101669031 - MGP_WSBEiJ_P0034845 Gpr68 protein_coding protein_coding MGP_WSBEiJ_T0034846.1 MGP_WSBEiJ_G0019364.1 mouse_genomes_project 12 101634993 101659192 - MGP_WSBEiJ_P0034846 Gpr68 protein_coding protein_coding MGP_WSBEiJ_T0034847.1 MGP_WSBEiJ_G0019364.1 mouse_genomes_project 12 101637637 101659166 - Gpr68 protein_coding processed_transcript MGP_WSBEiJ_T0034849.1 MGP_WSBEiJ_G0019364.1 mouse_genomes_project 12 101647342 101669048 - Gpr68 protein_coding processed_transcript MGP_WSBEiJ_T0034850.1 MGP_WSBEiJ_G0019364.1 mouse_genomes_project 12 101647530 101659192 - Gpr68 protein_coding processed_transcript MGP_WSBEiJ_T0000125.1 MGP_WSBEiJ_G0000094.1 mouse_genomes_project 12 118083421 118083715 - MGP_WSBEiJ_P0000125 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000127.1 MGP_WSBEiJ_G0000094.1 mouse_genomes_project 12 118083421 118083855 - MGP_WSBEiJ_P0000127 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000260.1 MGP_WSBEiJ_G0000208.1 mouse_genomes_project 12 116909559 116909992 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034128.1 MGP_WSBEiJ_G0019137.1 mouse_genomes_project 12 68383291 68410603 - MGP_WSBEiJ_P0034128 Pole2 protein_coding protein_coding MGP_WSBEiJ_T0100521.1 MGP_WSBEiJ_G0038979.1 mouse_genomes_project 12 105448883 105454411 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012566.1 MGP_WSBEiJ_G0010696.1 mouse_genomes_project 12 107798908 107800580 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000077.1 MGP_WSBEiJ_G0000062.1 mouse_genomes_project 12 116154974 116155441 - MGP_WSBEiJ_P0000077 Ighv7-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000078.1 MGP_WSBEiJ_G0000062.1 mouse_genomes_project 12 116154974 116155515 - MGP_WSBEiJ_P0000078 Ighv7-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0006337.1 MGP_WSBEiJ_G0005278.1 mouse_genomes_project 12 79798155 79804812 + Gm26669 lincRNA lincRNA MGP_WSBEiJ_T0035295.1 MGP_WSBEiJ_G0019524.1 mouse_genomes_project 12 118606319 118883387 + Ptprn2 protein_coding processed_transcript MGP_WSBEiJ_T0035296.1 MGP_WSBEiJ_G0019524.1 mouse_genomes_project 12 118606328 119235538 + Ptprn2 protein_coding processed_transcript MGP_WSBEiJ_T0035297.1 MGP_WSBEiJ_G0019524.1 mouse_genomes_project 12 118606328 119397638 + MGP_WSBEiJ_P0035297 Ptprn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035298.1 MGP_WSBEiJ_G0019524.1 mouse_genomes_project 12 118606369 118950639 + Ptprn2 protein_coding retained_intron MGP_WSBEiJ_T0035299.1 MGP_WSBEiJ_G0019524.1 mouse_genomes_project 12 118606432 119397582 + MGP_WSBEiJ_P0035299 Ptprn2 protein_coding protein_coding MGP_WSBEiJ_T0034860.1 MGP_WSBEiJ_G0019369.1 mouse_genomes_project 12 102590444 102664610 - MGP_WSBEiJ_P0034860 Fbln5 protein_coding protein_coding MGP_WSBEiJ_T0034558.1 MGP_WSBEiJ_G0019281.1 mouse_genomes_project 12 84429106 84430489 + MGP_WSBEiJ_P0034558 Rnf113a2 protein_coding protein_coding MGP_WSBEiJ_T0012561.1 MGP_WSBEiJ_G0010691.1 mouse_genomes_project 12 102711355 102711702 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006365.1 MGP_WSBEiJ_G0005305.1 mouse_genomes_project 12 107985973 108018388 - 4933406K04Rik lincRNA lincRNA MGP_WSBEiJ_T0006366.1 MGP_WSBEiJ_G0005305.1 mouse_genomes_project 12 107995813 108018350 - 4933406K04Rik lincRNA lincRNA MGP_WSBEiJ_T0006367.1 MGP_WSBEiJ_G0005305.1 mouse_genomes_project 12 108002351 108018359 - 4933406K04Rik lincRNA lincRNA MGP_WSBEiJ_T0006368.1 MGP_WSBEiJ_G0005305.1 mouse_genomes_project 12 108008082 108018388 - 4933406K04Rik lincRNA lincRNA MGP_WSBEiJ_T0034526.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290733 84320409 + MGP_WSBEiJ_P0034526 Ptgr2 protein_coding protein_coding MGP_WSBEiJ_T0034527.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290866 84308823 + Ptgr2 protein_coding retained_intron MGP_WSBEiJ_T0034528.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290875 84314791 + MGP_WSBEiJ_P0034528 Ptgr2 protein_coding protein_coding MGP_WSBEiJ_T0034529.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290882 84303166 + Ptgr2 protein_coding retained_intron MGP_WSBEiJ_T0034530.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290885 84313241 + Ptgr2 protein_coding processed_transcript MGP_WSBEiJ_T0034531.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290900 84310872 + Ptgr2 protein_coding processed_transcript MGP_WSBEiJ_T0034532.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290901 84318683 + MGP_WSBEiJ_P0034532 Ptgr2 protein_coding protein_coding MGP_WSBEiJ_T0034533.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290907 84319431 + MGP_WSBEiJ_P0034533 Ptgr2 protein_coding protein_coding MGP_WSBEiJ_T0034534.1 MGP_WSBEiJ_G0019275.1 mouse_genomes_project 12 84290914 84318683 + MGP_WSBEiJ_P0034534 Ptgr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000831.1 MGP_WSBEiJ_G0000770.1 mouse_genomes_project 12 82811417 82812728 - TEC TEC MGP_WSBEiJ_T0099003.1 MGP_WSBEiJ_G0037666.1 mouse_genomes_project 12 87704383 87704519 - Mir3068 snoRNA snoRNA MGP_WSBEiJ_T0006350.1 MGP_WSBEiJ_G0005291.1 mouse_genomes_project 12 91135508 91148917 + Gm26512 lincRNA lincRNA MGP_WSBEiJ_T0034151.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69038245 69129138 - Map4k5 protein_coding processed_transcript MGP_WSBEiJ_T0034152.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69038245 69129044 - MGP_WSBEiJ_P0034152 Map4k5 protein_coding protein_coding MGP_WSBEiJ_T0034153.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69038245 69129235 - MGP_WSBEiJ_P0034153 Map4k5 protein_coding protein_coding MGP_WSBEiJ_T0034154.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69038254 69129198 - MGP_WSBEiJ_P0034154 Map4k5 protein_coding protein_coding MGP_WSBEiJ_T0034155.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69038254 69129138 - MGP_WSBEiJ_P0034155 Map4k5 protein_coding protein_coding MGP_WSBEiJ_T0034156.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69038256 69052788 - Map4k5 protein_coding retained_intron MGP_WSBEiJ_T0034157.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69052116 69053193 - Map4k5 protein_coding processed_transcript MGP_WSBEiJ_T0034158.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69079252 69110465 - Map4k5 protein_coding retained_intron MGP_WSBEiJ_T0034159.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69084628 69129158 - Map4k5 protein_coding retained_intron MGP_WSBEiJ_T0034160.1 MGP_WSBEiJ_G0019148.1 mouse_genomes_project 12 69085098 69092475 - Map4k5 protein_coding retained_intron MGP_WSBEiJ_T0006362.1 MGP_WSBEiJ_G0005302.1 mouse_genomes_project 12 107611649 107615058 + Gm17032 lincRNA lincRNA MGP_WSBEiJ_T0097767.1 MGP_WSBEiJ_G0036430.1 mouse_genomes_project 12 60859307 60859411 + Gm24750 snRNA snRNA MGP_WSBEiJ_T0000267.1 MGP_WSBEiJ_G0000215.1 mouse_genomes_project 12 118083421 118083855 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034569.1 MGP_WSBEiJ_G0019288.1 mouse_genomes_project 12 84793674 84813173 - MGP_WSBEiJ_P0034569 Npc2 protein_coding protein_coding MGP_WSBEiJ_T0097277.1 MGP_WSBEiJ_G0035955.1 mouse_genomes_project 12 43175479 43186502 - Gm15902 sense_intronic sense_intronic MGP_WSBEiJ_T0034122.1 MGP_WSBEiJ_G0019133.1 mouse_genomes_project 12 68363420 68364676 - MGP_WSBEiJ_P0034122 Rpl36al protein_coding protein_coding MGP_WSBEiJ_T0034123.1 MGP_WSBEiJ_G0019133.1 mouse_genomes_project 12 68363427 68364703 - MGP_WSBEiJ_P0034123 Rpl36al protein_coding protein_coding MGP_WSBEiJ_T0034124.1 MGP_WSBEiJ_G0019133.1 mouse_genomes_project 12 68363430 68364773 - MGP_WSBEiJ_P0034124 Rpl36al protein_coding protein_coding MGP_WSBEiJ_T0003317.1 MGP_WSBEiJ_G0003052.1 mouse_genomes_project 12 38169402 38171323 + Arl4aos antisense antisense MGP_WSBEiJ_T0033572.1 MGP_WSBEiJ_G0018929.1 mouse_genomes_project 12 1712865 1721286 - MGP_WSBEiJ_P0033572 Fkbp1b protein_coding protein_coding MGP_WSBEiJ_T0033940.1 MGP_WSBEiJ_G0019061.1 mouse_genomes_project 12 42580503 42858341 + MGP_WSBEiJ_P0033940 Nrcam protein_coding protein_coding MGP_WSBEiJ_T0033941.1 MGP_WSBEiJ_G0019061.1 mouse_genomes_project 12 42580503 42858341 + MGP_WSBEiJ_P0033941 Nrcam protein_coding protein_coding MGP_WSBEiJ_T0033942.1 MGP_WSBEiJ_G0019061.1 mouse_genomes_project 12 42781766 42856538 + MGP_WSBEiJ_P0033942 Nrcam protein_coding unknown_likely_coding MGP_WSBEiJ_T0034656.1 MGP_WSBEiJ_G0019314.1 mouse_genomes_project 12 86381495 86432652 + MGP_WSBEiJ_P0034656 Gpatch2l protein_coding protein_coding MGP_WSBEiJ_T0033883.1 MGP_WSBEiJ_G0019044.1 mouse_genomes_project 12 34347956 34348896 - MGP_WSBEiJ_P0033883 D630036H23Rik protein_coding protein_coding MGP_WSBEiJ_T0100512.1 MGP_WSBEiJ_G0038970.1 mouse_genomes_project 12 104647570 104649694 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0034876.1 MGP_WSBEiJ_G0019374.1 mouse_genomes_project 12 103152415 103266941 + MGP_WSBEiJ_P0034876 Rin3 protein_coding protein_coding MGP_WSBEiJ_T0034877.1 MGP_WSBEiJ_G0019374.1 mouse_genomes_project 12 103152534 103236436 + MGP_WSBEiJ_P0034877 Rin3 protein_coding protein_coding MGP_WSBEiJ_T0034878.1 MGP_WSBEiJ_G0019374.1 mouse_genomes_project 12 103152535 103196421 + MGP_WSBEiJ_P0034878 Rin3 protein_coding protein_coding MGP_WSBEiJ_T0034879.1 MGP_WSBEiJ_G0019374.1 mouse_genomes_project 12 103154068 103266942 + MGP_WSBEiJ_P0034879 Rin3 protein_coding protein_coding MGP_WSBEiJ_T0034880.1 MGP_WSBEiJ_G0019374.1 mouse_genomes_project 12 103227699 103234858 + Rin3 protein_coding processed_transcript MGP_WSBEiJ_T0034881.1 MGP_WSBEiJ_G0019374.1 mouse_genomes_project 12 103227699 103241775 + Rin3 protein_coding processed_transcript MGP_WSBEiJ_T0034882.1 MGP_WSBEiJ_G0019374.1 mouse_genomes_project 12 103227734 103232580 + Rin3 protein_coding retained_intron MGP_WSBEiJ_T0003342.1 MGP_WSBEiJ_G0003073.1 mouse_genomes_project 12 85146061 85147915 + Prox2os antisense antisense MGP_WSBEiJ_T0009682.1 MGP_WSBEiJ_G0007839.1 mouse_genomes_project 12 111040901 111040968 + Mir540 miRNA miRNA MGP_WSBEiJ_T0033970.1 MGP_WSBEiJ_G0019075.1 mouse_genomes_project 12 50353967 50453053 - MGP_WSBEiJ_P0033970 Heatr5a protein_coding protein_coding MGP_WSBEiJ_T0011128.1 MGP_WSBEiJ_G0009285.1 mouse_genomes_project 12 32910302 32910543 - Gm24359 misc_RNA misc_RNA MGP_WSBEiJ_T0009635.1 MGP_WSBEiJ_G0007792.1 mouse_genomes_project 12 26385134 26385199 + Mir6937 miRNA miRNA MGP_WSBEiJ_T0006356.1 MGP_WSBEiJ_G0005297.1 mouse_genomes_project 12 101707735 101715925 + A630072L19Rik lincRNA lincRNA MGP_WSBEiJ_T0034729.1 MGP_WSBEiJ_G0019337.1 mouse_genomes_project 12 88652442 88759543 + MGP_WSBEiJ_P0034729 Adck1 protein_coding protein_coding MGP_WSBEiJ_T0034730.1 MGP_WSBEiJ_G0019337.1 mouse_genomes_project 12 88652689 88759542 + MGP_WSBEiJ_P0034730 Adck1 protein_coding protein_coding MGP_WSBEiJ_T0034061.1 MGP_WSBEiJ_G0019114.1 mouse_genomes_project 12 57914381 57934510 - MGP_WSBEiJ_P0034061 Trappc6b protein_coding protein_coding MGP_WSBEiJ_T0034468.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83539927 83559650 + MGP_WSBEiJ_P0034468 Rbm25 protein_coding protein_coding MGP_WSBEiJ_T0034469.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83539927 83590404 + MGP_WSBEiJ_P0034469 Rbm25 protein_coding protein_coding MGP_WSBEiJ_T0034470.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83540710 83600283 + MGP_WSBEiJ_P0034470 Rbm25 protein_coding protein_coding MGP_WSBEiJ_T0034471.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83540711 83564790 + MGP_WSBEiJ_P0034471 Rbm25 protein_coding protein_coding MGP_WSBEiJ_T0034472.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83540715 83559648 + MGP_WSBEiJ_P0034472 Rbm25 protein_coding protein_coding MGP_WSBEiJ_T0034473.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83540749 83575435 + MGP_WSBEiJ_P0034473 Rbm25 protein_coding protein_coding MGP_WSBEiJ_T0034474.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83540764 83554001 + MGP_WSBEiJ_P0034474 Rbm25 protein_coding protein_coding MGP_WSBEiJ_T0034475.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83540784 83579973 + MGP_WSBEiJ_P0034475 Rbm25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034476.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83545232 83549617 + Rbm25 protein_coding retained_intron MGP_WSBEiJ_T0034477.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83553856 83564809 + Rbm25 protein_coding retained_intron MGP_WSBEiJ_T0034478.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83553941 83599181 + MGP_WSBEiJ_P0034478 Rbm25 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034479.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83554001 83584463 + Rbm25 protein_coding retained_intron MGP_WSBEiJ_T0034480.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83559599 83565169 + Rbm25 protein_coding processed_transcript MGP_WSBEiJ_T0034481.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83561687 83565526 + Rbm25 protein_coding retained_intron MGP_WSBEiJ_T0034482.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83574496 83575555 + Rbm25 protein_coding retained_intron MGP_WSBEiJ_T0034483.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83578949 83579973 + Rbm25 protein_coding processed_transcript MGP_WSBEiJ_T0034484.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83590511 83592099 + Rbm25 protein_coding processed_transcript MGP_WSBEiJ_T0034485.1 MGP_WSBEiJ_G0019259.1 mouse_genomes_project 12 83590839 83593886 + Rbm25 protein_coding retained_intron MGP_WSBEiJ_T0034688.1 MGP_WSBEiJ_G0019323.1 mouse_genomes_project 12 87341598 87346680 - MGP_WSBEiJ_P0034688 Ngb protein_coding protein_coding MGP_WSBEiJ_T0034689.1 MGP_WSBEiJ_G0019323.1 mouse_genomes_project 12 87341598 87346697 - MGP_WSBEiJ_P0034689 Ngb protein_coding protein_coding MGP_WSBEiJ_T0034690.1 MGP_WSBEiJ_G0019323.1 mouse_genomes_project 12 87342092 87346508 - MGP_WSBEiJ_P0034690 Ngb protein_coding protein_coding MGP_WSBEiJ_T0035138.1 MGP_WSBEiJ_G0019470.1 mouse_genomes_project 12 112730553 112758927 - MGP_WSBEiJ_P0035138 4930595D18Rik protein_coding protein_coding MGP_WSBEiJ_T0033618.1 MGP_WSBEiJ_G0018944.1 mouse_genomes_project 12 6050946 6075728 + MGP_WSBEiJ_P0033618 Matn3 protein_coding protein_coding MGP_WSBEiJ_T0035128.1 MGP_WSBEiJ_G0019466.1 mouse_genomes_project 12 112422700 112443145 - MGP_WSBEiJ_P0035128 Cinp protein_coding protein_coding MGP_WSBEiJ_T0009699.1 MGP_WSBEiJ_G0007856.1 mouse_genomes_project 12 111172496 111172578 + Mir411 miRNA miRNA MGP_WSBEiJ_T0000079.1 MGP_WSBEiJ_G0000063.1 mouse_genomes_project 12 116168395 116168830 - MGP_WSBEiJ_P0000079 Ighv3-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034564.1 MGP_WSBEiJ_G0019285.1 mouse_genomes_project 12 84626759 84641687 - MGP_WSBEiJ_P0034564 Abcd4 protein_coding protein_coding MGP_WSBEiJ_T0034552.1 MGP_WSBEiJ_G0019279.1 mouse_genomes_project 12 84382125 84415849 - MGP_WSBEiJ_P0034552 Entpd5 protein_coding protein_coding MGP_WSBEiJ_T0034553.1 MGP_WSBEiJ_G0019279.1 mouse_genomes_project 12 84382139 84419145 - MGP_WSBEiJ_P0034553 Entpd5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034554.1 MGP_WSBEiJ_G0019279.1 mouse_genomes_project 12 84388628 84394539 - Entpd5 protein_coding retained_intron MGP_WSBEiJ_T0034555.1 MGP_WSBEiJ_G0019279.1 mouse_genomes_project 12 84414070 84419347 - Entpd5 protein_coding processed_transcript MGP_WSBEiJ_T0034888.1 MGP_WSBEiJ_G0019377.1 mouse_genomes_project 12 103427096 103438063 + MGP_WSBEiJ_P0034888 Chga protein_coding protein_coding MGP_WSBEiJ_T0034024.1 MGP_WSBEiJ_G0019101.1 mouse_genomes_project 12 55066680 55085706 - MGP_WSBEiJ_P0034024 Mbip protein_coding protein_coding MGP_WSBEiJ_T0034275.1 MGP_WSBEiJ_G0019190.1 mouse_genomes_project 12 73735902 73738668 - MGP_WSBEiJ_P0034275 Gm11042 protein_coding protein_coding MGP_WSBEiJ_T0012577.1 MGP_WSBEiJ_G0010707.1 mouse_genomes_project 12 115667121 115667556 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034521.1 MGP_WSBEiJ_G0019273.1 mouse_genomes_project 12 84101642 84104001 - MGP_WSBEiJ_P0034521 Pnma1 protein_coding protein_coding MGP_WSBEiJ_T0033491.1 MGP_WSBEiJ_G0018911.1 mouse_genomes_project 12 170056 212724 + MGP_WSBEiJ_P0033491 Kif3c protein_coding protein_coding MGP_WSBEiJ_T0035254.1 MGP_WSBEiJ_G0019514.1 mouse_genomes_project 12 114777363 114817565 + MGP_WSBEiJ_P0035254 Mta1 protein_coding protein_coding MGP_WSBEiJ_T0035255.1 MGP_WSBEiJ_G0019514.1 mouse_genomes_project 12 114777363 114817565 + MGP_WSBEiJ_P0035255 Mta1 protein_coding protein_coding MGP_WSBEiJ_T0035256.1 MGP_WSBEiJ_G0019514.1 mouse_genomes_project 12 114777363 114817564 + MGP_WSBEiJ_P0035256 Mta1 protein_coding protein_coding MGP_WSBEiJ_T0035257.1 MGP_WSBEiJ_G0019514.1 mouse_genomes_project 12 114777363 114817565 + MGP_WSBEiJ_P0035257 Mta1 protein_coding protein_coding MGP_WSBEiJ_T0035258.1 MGP_WSBEiJ_G0019514.1 mouse_genomes_project 12 114777408 114817532 + MGP_WSBEiJ_P0035258 Mta1 protein_coding protein_coding MGP_WSBEiJ_T0035259.1 MGP_WSBEiJ_G0019514.1 mouse_genomes_project 12 114777450 114817031 + Mta1 protein_coding processed_transcript MGP_WSBEiJ_T0035260.1 MGP_WSBEiJ_G0019514.1 mouse_genomes_project 12 114811836 114813878 + Mta1 protein_coding processed_transcript MGP_WSBEiJ_T0035261.1 MGP_WSBEiJ_G0019514.1 mouse_genomes_project 12 114812052 114813836 + Mta1 protein_coding processed_transcript MGP_WSBEiJ_T0016740.1 MGP_WSBEiJ_G0014660.1 mouse_genomes_project 12 119259510 119266204 - Gm10421 processed_transcript antisense MGP_WSBEiJ_T0016741.1 MGP_WSBEiJ_G0014660.1 mouse_genomes_project 12 119260352 119266258 - Gm10421 processed_transcript retained_intron MGP_WSBEiJ_T0016742.1 MGP_WSBEiJ_G0014660.1 mouse_genomes_project 12 119266078 119266640 - Gm10421 processed_transcript antisense MGP_WSBEiJ_T0034179.1 MGP_WSBEiJ_G0019155.1 mouse_genomes_project 12 69510967 69521591 - MGP_WSBEiJ_P0034179 Trim9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034180.1 MGP_WSBEiJ_G0019155.1 mouse_genomes_project 12 69510973 69615130 - MGP_WSBEiJ_P0034180 Trim9 protein_coding protein_coding MGP_WSBEiJ_T0034181.1 MGP_WSBEiJ_G0019155.1 mouse_genomes_project 12 69510973 69615130 - MGP_WSBEiJ_P0034181 Trim9 protein_coding protein_coding MGP_WSBEiJ_T0034182.1 MGP_WSBEiJ_G0019155.1 mouse_genomes_project 12 69530157 69615130 - MGP_WSBEiJ_P0034182 Trim9 protein_coding protein_coding MGP_WSBEiJ_T0035054.1 MGP_WSBEiJ_G0019446.1 mouse_genomes_project 12 109793047 109943295 + Eml1 protein_coding retained_intron MGP_WSBEiJ_T0035055.1 MGP_WSBEiJ_G0019446.1 mouse_genomes_project 12 109848914 109977080 + MGP_WSBEiJ_P0035055 Eml1 protein_coding protein_coding MGP_WSBEiJ_T0035056.1 MGP_WSBEiJ_G0019446.1 mouse_genomes_project 12 109849176 109975060 + MGP_WSBEiJ_P0035056 Eml1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035057.1 MGP_WSBEiJ_G0019446.1 mouse_genomes_project 12 109849293 109975744 + MGP_WSBEiJ_P0035057 Eml1 protein_coding protein_coding MGP_WSBEiJ_T0035058.1 MGP_WSBEiJ_G0019446.1 mouse_genomes_project 12 109904313 109977080 + Eml1 protein_coding processed_transcript MGP_WSBEiJ_T0035059.1 MGP_WSBEiJ_G0019446.1 mouse_genomes_project 12 109971589 109974955 + Eml1 protein_coding processed_transcript MGP_WSBEiJ_T0035060.1 MGP_WSBEiJ_G0019446.1 mouse_genomes_project 12 109971647 109977133 + Eml1 protein_coding processed_transcript MGP_WSBEiJ_T0000064.1 MGP_WSBEiJ_G0000052.1 mouse_genomes_project 12 115624818 115625278 - MGP_WSBEiJ_P0000064 Ighv5-12-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034612.1 MGP_WSBEiJ_G0019301.1 mouse_genomes_project 12 85347629 85358196 - MGP_WSBEiJ_P0034612 Acyp1 protein_coding protein_coding MGP_WSBEiJ_T0034613.1 MGP_WSBEiJ_G0019301.1 mouse_genomes_project 12 85347640 85358067 - MGP_WSBEiJ_P0034613 Acyp1 protein_coding protein_coding MGP_WSBEiJ_T0034614.1 MGP_WSBEiJ_G0019301.1 mouse_genomes_project 12 85347778 85365910 - MGP_WSBEiJ_P0034614 Acyp1 protein_coding protein_coding MGP_WSBEiJ_T0034615.1 MGP_WSBEiJ_G0019301.1 mouse_genomes_project 12 85356653 85358179 - MGP_WSBEiJ_P0034615 Acyp1 protein_coding protein_coding MGP_WSBEiJ_T0009655.1 MGP_WSBEiJ_G0007812.1 mouse_genomes_project 12 76068744 76068823 - Mir5135 miRNA miRNA MGP_WSBEiJ_T0033830.1 MGP_WSBEiJ_G0019022.1 mouse_genomes_project 12 29999536 30036382 - MGP_WSBEiJ_P0033830 Pik3cg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033831.1 MGP_WSBEiJ_G0019022.1 mouse_genomes_project 12 30000235 30036430 - MGP_WSBEiJ_P0033831 Pik3cg protein_coding protein_coding MGP_WSBEiJ_T0033832.1 MGP_WSBEiJ_G0019022.1 mouse_genomes_project 12 30001702 30036245 - MGP_WSBEiJ_P0033832 Pik3cg protein_coding protein_coding MGP_WSBEiJ_T0033833.1 MGP_WSBEiJ_G0019022.1 mouse_genomes_project 12 30028329 30028788 - Pik3cg protein_coding retained_intron MGP_WSBEiJ_T0033646.1 MGP_WSBEiJ_G0018959.1 mouse_genomes_project 12 10465729 10494909 - MGP_WSBEiJ_P0033646 Ddx1 protein_coding protein_coding MGP_WSBEiJ_T0006374.1 MGP_WSBEiJ_G0005311.1 mouse_genomes_project 12 108511499 108516454 + Gm2800 lincRNA lincRNA MGP_WSBEiJ_T0034319.1 MGP_WSBEiJ_G0019204.1 mouse_genomes_project 12 75931069 75933814 + MGP_WSBEiJ_P0034319 Hspa2 protein_coding protein_coding MGP_WSBEiJ_T0034392.1 MGP_WSBEiJ_G0019239.1 mouse_genomes_project 12 80507070 80513567 - MGP_WSBEiJ_P0034392 Ccdc177 protein_coding protein_coding MGP_WSBEiJ_T0012549.1 MGP_WSBEiJ_G0010679.1 mouse_genomes_project 12 82387251 82387494 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034432.1 MGP_WSBEiJ_G0019250.1 mouse_genomes_project 12 81433623 81467620 + MGP_WSBEiJ_P0034432 Ttc9 protein_coding protein_coding MGP_WSBEiJ_T0033861.1 MGP_WSBEiJ_G0019032.1 mouse_genomes_project 12 32244585 32412366 - MGP_WSBEiJ_P0033861 Hdac9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033862.1 MGP_WSBEiJ_G0019032.1 mouse_genomes_project 12 32244598 32412310 - MGP_WSBEiJ_P0033862 Hdac9 protein_coding protein_coding MGP_WSBEiJ_T0034215.1 MGP_WSBEiJ_G0019168.1 mouse_genomes_project 12 71406125 71416416 + MGP_WSBEiJ_P0034215 Jkamp protein_coding protein_coding MGP_WSBEiJ_T0034216.1 MGP_WSBEiJ_G0019168.1 mouse_genomes_project 12 71406325 71415566 + Jkamp protein_coding processed_transcript MGP_WSBEiJ_T0034217.1 MGP_WSBEiJ_G0019168.1 mouse_genomes_project 12 71406393 71423485 + MGP_WSBEiJ_P0034217 Jkamp protein_coding protein_coding MGP_WSBEiJ_T0034218.1 MGP_WSBEiJ_G0019168.1 mouse_genomes_project 12 71406393 71424087 + MGP_WSBEiJ_P0034218 Jkamp protein_coding protein_coding MGP_WSBEiJ_T0034219.1 MGP_WSBEiJ_G0019168.1 mouse_genomes_project 12 71410791 71416416 + Jkamp protein_coding retained_intron MGP_WSBEiJ_T0034220.1 MGP_WSBEiJ_G0019168.1 mouse_genomes_project 12 71411331 71416290 + Jkamp protein_coding retained_intron MGP_WSBEiJ_T0034221.1 MGP_WSBEiJ_G0019168.1 mouse_genomes_project 12 71422440 71423485 + Jkamp protein_coding retained_intron MGP_WSBEiJ_T0033957.1 MGP_WSBEiJ_G0019069.1 mouse_genomes_project 12 49793915 49822957 + MGP_WSBEiJ_P0033957 G2e3 protein_coding protein_coding MGP_WSBEiJ_T0033958.1 MGP_WSBEiJ_G0019069.1 mouse_genomes_project 12 49794142 49819195 + MGP_WSBEiJ_P0033958 G2e3 protein_coding protein_coding MGP_WSBEiJ_T0033959.1 MGP_WSBEiJ_G0019069.1 mouse_genomes_project 12 49794226 49819298 + MGP_WSBEiJ_P0033959 G2e3 protein_coding protein_coding MGP_WSBEiJ_T0033960.1 MGP_WSBEiJ_G0019069.1 mouse_genomes_project 12 49803107 49809495 + G2e3 protein_coding retained_intron MGP_WSBEiJ_T0033961.1 MGP_WSBEiJ_G0019069.1 mouse_genomes_project 12 49816614 49820005 + G2e3 protein_coding retained_intron MGP_WSBEiJ_T0000084.1 MGP_WSBEiJ_G0000066.1 mouse_genomes_project 12 116214617 116215047 - MGP_WSBEiJ_P0000084 Ighv9-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000085.1 MGP_WSBEiJ_G0000066.1 mouse_genomes_project 12 116214617 116214911 - MGP_WSBEiJ_P0000085 Ighv9-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034101.1 MGP_WSBEiJ_G0019126.1 mouse_genomes_project 12 64058664 64070143 - MGP_WSBEiJ_P0034101 Fkbp3 protein_coding protein_coding MGP_WSBEiJ_T0009640.1 MGP_WSBEiJ_G0007797.1 mouse_genomes_project 12 33237060 33237169 + Gm44396 miRNA miRNA MGP_WSBEiJ_T0033756.1 MGP_WSBEiJ_G0018998.1 mouse_genomes_project 12 26353743 26363597 + MGP_WSBEiJ_P0033756 Rnaseh1 protein_coding protein_coding MGP_WSBEiJ_T0009662.1 MGP_WSBEiJ_G0007819.1 mouse_genomes_project 12 87526584 87526660 + miRNA miRNA MGP_WSBEiJ_T0003320.1 MGP_WSBEiJ_G0003055.1 mouse_genomes_project 12 52585405 52602696 - 1700060O08Rik antisense antisense MGP_WSBEiJ_T0000254.1 MGP_WSBEiJ_G0000202.1 mouse_genomes_project 12 116841227 116841649 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0000116.1 MGP_WSBEiJ_G0000089.1 mouse_genomes_project 12 117033950 117034380 - MGP_WSBEiJ_P0000116 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000120.1 MGP_WSBEiJ_G0000089.1 mouse_genomes_project 12 117033966 117034354 - MGP_WSBEiJ_P0000120 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033720.1 MGP_WSBEiJ_G0018983.1 mouse_genomes_project 12 22088219 22134323 + MGP_WSBEiJ_P0033720 Grhl1 protein_coding protein_coding MGP_WSBEiJ_T0033721.1 MGP_WSBEiJ_G0018983.1 mouse_genomes_project 12 22096601 22134327 + MGP_WSBEiJ_P0033721 Grhl1 protein_coding protein_coding MGP_WSBEiJ_T0000023.1 MGP_WSBEiJ_G0000017.1 mouse_genomes_project 12 115162241 115162252 - MGP_WSBEiJ_P0000023 Ighd4-1 IG_D_gene IG_D_gene MGP_WSBEiJ_T0009742.1 MGP_WSBEiJ_G0007899.1 mouse_genomes_project 12 111763939 111764021 - Mir1247 miRNA miRNA MGP_WSBEiJ_T0016737.1 MGP_WSBEiJ_G0014658.1 mouse_genomes_project 12 113320712 113321456 + Gm15995 processed_transcript processed_transcript MGP_WSBEiJ_T0016696.1 MGP_WSBEiJ_G0014643.1 mouse_genomes_project 12 18688673 18692479 - Gm20535 processed_transcript processed_transcript MGP_WSBEiJ_T0097749.1 MGP_WSBEiJ_G0036412.1 mouse_genomes_project 12 6992520 6992624 - Gm22845 snRNA snRNA MGP_WSBEiJ_T0097787.1 MGP_WSBEiJ_G0036450.1 mouse_genomes_project 12 114893122 114893226 + Gm25622 snRNA snRNA MGP_WSBEiJ_T0033726.1 MGP_WSBEiJ_G0018985.1 mouse_genomes_project 12 22182842 22198342 - MGP_WSBEiJ_P0033726 Cys1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033727.1 MGP_WSBEiJ_G0018985.1 mouse_genomes_project 12 22182852 22198324 - MGP_WSBEiJ_P0033727 Cys1 protein_coding protein_coding MGP_WSBEiJ_T0033728.1 MGP_WSBEiJ_G0018985.1 mouse_genomes_project 12 22182852 22198324 - MGP_WSBEiJ_P0033728 Cys1 protein_coding protein_coding MGP_WSBEiJ_T0033729.1 MGP_WSBEiJ_G0018985.1 mouse_genomes_project 12 22182957 22197550 - MGP_WSBEiJ_P0033729 Cys1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033730.1 MGP_WSBEiJ_G0018985.1 mouse_genomes_project 12 22182957 22197550 - MGP_WSBEiJ_P0033730 Cys1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033731.1 MGP_WSBEiJ_G0018985.1 mouse_genomes_project 12 22183558 22196464 - Cys1 protein_coding processed_transcript MGP_WSBEiJ_T0033732.1 MGP_WSBEiJ_G0018985.1 mouse_genomes_project 12 22183694 22197469 - MGP_WSBEiJ_P0033732 Cys1 protein_coding protein_coding MGP_WSBEiJ_T0033733.1 MGP_WSBEiJ_G0018985.1 mouse_genomes_project 12 22185504 22197246 - MGP_WSBEiJ_P0033733 Cys1 protein_coding protein_coding MGP_WSBEiJ_T0033926.1 MGP_WSBEiJ_G0019055.1 mouse_genomes_project 12 38464490 38591987 - MGP_WSBEiJ_P0033926 Zfp277 protein_coding protein_coding MGP_WSBEiJ_T0033927.1 MGP_WSBEiJ_G0019055.1 mouse_genomes_project 12 38465002 38591966 - MGP_WSBEiJ_P0033927 Zfp277 protein_coding protein_coding MGP_WSBEiJ_T0099006.1 MGP_WSBEiJ_G0037669.1 mouse_genomes_project 12 103122156 103122372 - Gm25203 snoRNA snoRNA MGP_WSBEiJ_T0034036.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56021103 56107781 + Mipol1 protein_coding retained_intron MGP_WSBEiJ_T0034037.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56021110 56158858 + Mipol1 protein_coding retained_intron MGP_WSBEiJ_T0034038.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56021112 56126191 + Mipol1 protein_coding retained_intron MGP_WSBEiJ_T0034039.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56021122 56316172 + MGP_WSBEiJ_P0034039 Mipol1 protein_coding protein_coding MGP_WSBEiJ_T0034040.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56021122 56271281 + MGP_WSBEiJ_P0034040 Mipol1 protein_coding protein_coding MGP_WSBEiJ_T0034041.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56021167 56174907 + Mipol1 protein_coding retained_intron MGP_WSBEiJ_T0034042.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56076858 56282002 + MGP_WSBEiJ_P0034042 Mipol1 protein_coding protein_coding MGP_WSBEiJ_T0034043.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56095305 56315497 + MGP_WSBEiJ_P0034043 Mipol1 protein_coding protein_coding MGP_WSBEiJ_T0034044.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56104689 56106283 + Mipol1 protein_coding retained_intron MGP_WSBEiJ_T0034045.1 MGP_WSBEiJ_G0019107.1 mouse_genomes_project 12 56135875 56174326 + Mipol1 protein_coding processed_transcript MGP_WSBEiJ_T0035149.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113019016 113032558 + MGP_WSBEiJ_P0035149 Tnfaip2 protein_coding protein_coding MGP_WSBEiJ_T0035150.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113019205 113032218 + MGP_WSBEiJ_P0035150 Tnfaip2 protein_coding protein_coding MGP_WSBEiJ_T0035151.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113019209 113032218 + Tnfaip2 protein_coding retained_intron MGP_WSBEiJ_T0035152.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113019209 113025145 + MGP_WSBEiJ_P0035152 Tnfaip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035153.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113020874 113022063 + MGP_WSBEiJ_P0035153 Tnfaip2 protein_coding protein_coding MGP_WSBEiJ_T0035154.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113021549 113031365 + MGP_WSBEiJ_P0035154 Tnfaip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035155.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113022635 113031365 + MGP_WSBEiJ_P0035155 Tnfaip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035156.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113024684 113025872 + Tnfaip2 protein_coding retained_intron MGP_WSBEiJ_T0035157.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113026920 113028880 + Tnfaip2 protein_coding retained_intron MGP_WSBEiJ_T0035158.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113027275 113031299 + MGP_WSBEiJ_P0035158 Tnfaip2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035159.1 MGP_WSBEiJ_G0019476.1 mouse_genomes_project 12 113027929 113031166 + Tnfaip2 protein_coding retained_intron MGP_WSBEiJ_T0006303.1 MGP_WSBEiJ_G0005255.1 mouse_genomes_project 12 10130820 10135355 + 4930519A11Rik lincRNA lincRNA MGP_WSBEiJ_T0000258.1 MGP_WSBEiJ_G0000206.1 mouse_genomes_project 12 116885544 116885972 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0035051.1 MGP_WSBEiJ_G0019443.1 mouse_genomes_project 12 109606279 109682148 - MGP_WSBEiJ_P0035051 Ccdc85c protein_coding protein_coding MGP_WSBEiJ_T0033949.1 MGP_WSBEiJ_G0019064.1 mouse_genomes_project 12 47749041 47750685 + Foxg1 protein_coding processed_transcript MGP_WSBEiJ_T0033950.1 MGP_WSBEiJ_G0019064.1 mouse_genomes_project 12 47749181 47749984 + Foxg1 protein_coding processed_transcript MGP_WSBEiJ_T0033951.1 MGP_WSBEiJ_G0019064.1 mouse_genomes_project 12 47749264 47753174 + MGP_WSBEiJ_P0033951 Foxg1 protein_coding protein_coding MGP_WSBEiJ_T0033952.1 MGP_WSBEiJ_G0019064.1 mouse_genomes_project 12 47749390 47753180 + MGP_WSBEiJ_P0033952 Foxg1 protein_coding protein_coding MGP_WSBEiJ_T0006333.1 MGP_WSBEiJ_G0005276.1 mouse_genomes_project 12 75929650 75930548 - 4930426I24Rik lincRNA lincRNA MGP_WSBEiJ_T0033789.1 MGP_WSBEiJ_G0019010.1 mouse_genomes_project 12 28963024 28963579 + MGP_WSBEiJ_P0033789 6030469F06Rik protein_coding protein_coding MGP_WSBEiJ_T0034486.1 MGP_WSBEiJ_G0019260.1 mouse_genomes_project 12 83605571 83652980 + MGP_WSBEiJ_P0034486 Psen1 protein_coding protein_coding MGP_WSBEiJ_T0034487.1 MGP_WSBEiJ_G0019260.1 mouse_genomes_project 12 83605931 83654066 + MGP_WSBEiJ_P0034487 Psen1 protein_coding protein_coding MGP_WSBEiJ_T0034282.1 MGP_WSBEiJ_G0019194.1 mouse_genomes_project 12 74906400 75061534 - MGP_WSBEiJ_P0034282 Ppp2r5e protein_coding protein_coding MGP_WSBEiJ_T0000249.1 MGP_WSBEiJ_G0000197.1 mouse_genomes_project 12 116456335 116456641 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0012560.1 MGP_WSBEiJ_G0010690.1 mouse_genomes_project 12 102488246 102488589 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009747.1 MGP_WSBEiJ_G0007904.1 mouse_genomes_project 12 114310370 114310445 - Mir6939 miRNA miRNA MGP_WSBEiJ_T0096925.1 MGP_WSBEiJ_G0035606.1 mouse_genomes_project 12 9302840 9302971 + Gm26171 rRNA rRNA MGP_WSBEiJ_T0006294.1 MGP_WSBEiJ_G0005247.1 mouse_genomes_project 12 141857 157706 - Gm26520 lincRNA lincRNA MGP_WSBEiJ_T0033805.1 MGP_WSBEiJ_G0019014.1 mouse_genomes_project 12 29276050 29291241 - MGP_WSBEiJ_P0033805 Cbll1 protein_coding protein_coding MGP_WSBEiJ_T0033806.1 MGP_WSBEiJ_G0019014.1 mouse_genomes_project 12 29276157 29291241 - MGP_WSBEiJ_P0033806 Cbll1 protein_coding protein_coding MGP_WSBEiJ_T0033807.1 MGP_WSBEiJ_G0019014.1 mouse_genomes_project 12 29278499 29291241 - MGP_WSBEiJ_P0033807 Cbll1 protein_coding protein_coding MGP_WSBEiJ_T0033808.1 MGP_WSBEiJ_G0019014.1 mouse_genomes_project 12 29279135 29291182 - MGP_WSBEiJ_P0033808 Cbll1 protein_coding protein_coding MGP_WSBEiJ_T0033809.1 MGP_WSBEiJ_G0019014.1 mouse_genomes_project 12 29279145 29291180 - MGP_WSBEiJ_P0033809 Cbll1 protein_coding protein_coding MGP_WSBEiJ_T0012541.1 MGP_WSBEiJ_G0010671.1 mouse_genomes_project 12 73369963 73370269 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096927.1 MGP_WSBEiJ_G0035608.1 mouse_genomes_project 12 23273116 23273222 + Gm22527 rRNA rRNA MGP_WSBEiJ_T0006407.1 MGP_WSBEiJ_G0005322.1 mouse_genomes_project 12 112389103 112392756 + 4921507G05Rik lincRNA lincRNA MGP_WSBEiJ_T0098990.1 MGP_WSBEiJ_G0037653.1 mouse_genomes_project 12 58529476 58529607 - Gm24377 snoRNA snoRNA MGP_WSBEiJ_T0035123.1 MGP_WSBEiJ_G0019464.1 mouse_genomes_project 12 112351273 112389014 - Mok protein_coding retained_intron MGP_WSBEiJ_T0035124.1 MGP_WSBEiJ_G0019464.1 mouse_genomes_project 12 112351273 112389005 - MGP_WSBEiJ_P0035124 Mok protein_coding protein_coding MGP_WSBEiJ_T0035125.1 MGP_WSBEiJ_G0019464.1 mouse_genomes_project 12 112351273 112389014 - MGP_WSBEiJ_P0035125 Mok protein_coding protein_coding MGP_WSBEiJ_T0035126.1 MGP_WSBEiJ_G0019464.1 mouse_genomes_project 12 112360043 112389002 - MGP_WSBEiJ_P0035126 Mok protein_coding protein_coding MGP_WSBEiJ_T0033858.1 MGP_WSBEiJ_G0019029.1 mouse_genomes_project 12 31809505 31810391 + MGP_WSBEiJ_P0033858 Ferd3l protein_coding protein_coding MGP_WSBEiJ_T0034140.1 MGP_WSBEiJ_G0019143.1 mouse_genomes_project 12 68794349 68800925 - MGP_WSBEiJ_P0034140 protein_coding protein_coding MGP_WSBEiJ_T0035002.1 MGP_WSBEiJ_G0019429.1 mouse_genomes_project 12 106322312 106359274 + MGP_WSBEiJ_P0035002 Tcl1b3 protein_coding protein_coding MGP_WSBEiJ_T0006327.1 MGP_WSBEiJ_G0005272.1 mouse_genomes_project 12 69083696 69089710 + 4931403G20Rik lincRNA lincRNA MGP_WSBEiJ_T0035109.1 MGP_WSBEiJ_G0019461.1 mouse_genomes_project 12 112202039 112204312 - MGP_WSBEiJ_P0035109 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035110.1 MGP_WSBEiJ_G0019461.1 mouse_genomes_project 12 112202894 112203375 - protein_coding retained_intron MGP_WSBEiJ_T0035111.1 MGP_WSBEiJ_G0019461.1 mouse_genomes_project 12 112203854 112208257 - protein_coding retained_intron MGP_WSBEiJ_T0035112.1 MGP_WSBEiJ_G0019461.1 mouse_genomes_project 12 112204478 112209641 - protein_coding retained_intron MGP_WSBEiJ_T0035113.1 MGP_WSBEiJ_G0019461.1 mouse_genomes_project 12 112208593 112217869 - MGP_WSBEiJ_P0035113 protein_coding protein_coding MGP_WSBEiJ_T0035114.1 MGP_WSBEiJ_G0019461.1 mouse_genomes_project 12 112209238 112210213 - MGP_WSBEiJ_P0035114 protein_coding protein_coding MGP_WSBEiJ_T0035115.1 MGP_WSBEiJ_G0019461.1 mouse_genomes_project 12 112209254 112209918 - MGP_WSBEiJ_P0035115 protein_coding protein_coding MGP_WSBEiJ_T0012576.1 MGP_WSBEiJ_G0010706.1 mouse_genomes_project 12 115123804 115124161 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035130.1 MGP_WSBEiJ_G0019468.1 mouse_genomes_project 12 112536417 112540105 - MGP_WSBEiJ_P0035130 Ankrd9 protein_coding protein_coding MGP_WSBEiJ_T0035131.1 MGP_WSBEiJ_G0019468.1 mouse_genomes_project 12 112537490 112539320 - MGP_WSBEiJ_P0035131 Ankrd9 protein_coding protein_coding MGP_WSBEiJ_T0035132.1 MGP_WSBEiJ_G0019468.1 mouse_genomes_project 12 112537491 112540008 - MGP_WSBEiJ_P0035132 Ankrd9 protein_coding protein_coding MGP_WSBEiJ_T0035133.1 MGP_WSBEiJ_G0019468.1 mouse_genomes_project 12 112537491 112540086 - MGP_WSBEiJ_P0035133 Ankrd9 protein_coding protein_coding MGP_WSBEiJ_T0035134.1 MGP_WSBEiJ_G0019468.1 mouse_genomes_project 12 112537491 112539683 - MGP_WSBEiJ_P0035134 Ankrd9 protein_coding protein_coding MGP_WSBEiJ_T0035135.1 MGP_WSBEiJ_G0019468.1 mouse_genomes_project 12 112537493 112540060 - MGP_WSBEiJ_P0035135 Ankrd9 protein_coding protein_coding MGP_WSBEiJ_T0035136.1 MGP_WSBEiJ_G0019468.1 mouse_genomes_project 12 112539036 112539644 - Ankrd9 protein_coding processed_transcript MGP_WSBEiJ_T0098972.1 MGP_WSBEiJ_G0037635.1 mouse_genomes_project 12 25295961 25296086 + Gm24326 snoRNA snoRNA MGP_WSBEiJ_T0099002.1 MGP_WSBEiJ_G0037665.1 mouse_genomes_project 12 82618863 82618999 - Gm22149 snoRNA snoRNA MGP_WSBEiJ_T0034129.1 MGP_WSBEiJ_G0019138.1 mouse_genomes_project 12 68423480 68424938 + Klhdc1 protein_coding processed_transcript MGP_WSBEiJ_T0034130.1 MGP_WSBEiJ_G0019138.1 mouse_genomes_project 12 68424129 68473555 + MGP_WSBEiJ_P0034130 Klhdc1 protein_coding protein_coding MGP_WSBEiJ_T0034131.1 MGP_WSBEiJ_G0019138.1 mouse_genomes_project 12 68424211 68424940 + Klhdc1 protein_coding processed_transcript MGP_WSBEiJ_T0034132.1 MGP_WSBEiJ_G0019138.1 mouse_genomes_project 12 68424215 68472242 + MGP_WSBEiJ_P0034132 Klhdc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034522.1 MGP_WSBEiJ_G0019274.1 mouse_genomes_project 12 84104690 84176279 - MGP_WSBEiJ_P0034522 Elmsan1 protein_coding protein_coding MGP_WSBEiJ_T0034523.1 MGP_WSBEiJ_G0019274.1 mouse_genomes_project 12 84104792 84149391 - MGP_WSBEiJ_P0034523 Elmsan1 protein_coding protein_coding MGP_WSBEiJ_T0034524.1 MGP_WSBEiJ_G0019274.1 mouse_genomes_project 12 84108455 84110618 - Elmsan1 protein_coding processed_transcript MGP_WSBEiJ_T0034525.1 MGP_WSBEiJ_G0019274.1 mouse_genomes_project 12 84111913 84115532 - Elmsan1 protein_coding processed_transcript MGP_WSBEiJ_T0006339.1 MGP_WSBEiJ_G0005280.1 mouse_genomes_project 12 80246708 80256078 - Gm26777 lincRNA lincRNA MGP_WSBEiJ_T0000115.1 MGP_WSBEiJ_G0000088.1 mouse_genomes_project 12 117033950 117034385 - MGP_WSBEiJ_P0000115 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033865.1 MGP_WSBEiJ_G0019035.1 mouse_genomes_project 12 32956946 33061893 + MGP_WSBEiJ_P0033865 Snx13 protein_coding protein_coding MGP_WSBEiJ_T0033866.1 MGP_WSBEiJ_G0019035.1 mouse_genomes_project 12 32956957 33047705 + MGP_WSBEiJ_P0033866 Snx13 protein_coding protein_coding MGP_WSBEiJ_T0006353.1 MGP_WSBEiJ_G0005294.1 mouse_genomes_project 12 100236170 100299438 + Gm26839 lincRNA lincRNA MGP_WSBEiJ_T0034952.1 MGP_WSBEiJ_G0019399.1 mouse_genomes_project 12 104577353 104587966 - MGP_WSBEiJ_P0034952 Serpina6 protein_coding protein_coding MGP_WSBEiJ_T0034953.1 MGP_WSBEiJ_G0019399.1 mouse_genomes_project 12 104585127 104587856 - MGP_WSBEiJ_P0034953 Serpina6 protein_coding protein_coding MGP_WSBEiJ_T0012572.1 MGP_WSBEiJ_G0010702.1 mouse_genomes_project 12 109867473 109868214 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006395.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111192099 111211581 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006396.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111192100 111193177 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006397.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111192611 111211581 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006398.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111193294 111211583 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006399.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111197316 111211581 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006400.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111197316 111206064 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006401.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111197320 111210304 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006402.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111200031 111202391 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006403.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111200109 111203833 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006404.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111206131 111211581 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006405.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111210005 111211578 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0006406.1 MGP_WSBEiJ_G0005321.1 mouse_genomes_project 12 111210066 111211581 + Mirg lincRNA lincRNA MGP_WSBEiJ_T0009644.1 MGP_WSBEiJ_G0007801.1 mouse_genomes_project 12 42460890 42460951 + Mir5627 miRNA miRNA MGP_WSBEiJ_T0009673.1 MGP_WSBEiJ_G0007830.1 mouse_genomes_project 12 110099235 110099334 + Mir342 miRNA miRNA MGP_WSBEiJ_T0034429.1 MGP_WSBEiJ_G0019249.1 mouse_genomes_project 12 81372457 81373508 - Med6 protein_coding retained_intron MGP_WSBEiJ_T0034430.1 MGP_WSBEiJ_G0019249.1 mouse_genomes_project 12 81372591 81394825 - MGP_WSBEiJ_P0034430 Med6 protein_coding protein_coding MGP_WSBEiJ_T0034431.1 MGP_WSBEiJ_G0019249.1 mouse_genomes_project 12 81381621 81394821 - Med6 protein_coding retained_intron MGP_WSBEiJ_T0034672.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150053 87166989 + MGP_WSBEiJ_P0034672 Cipc protein_coding protein_coding MGP_WSBEiJ_T0034673.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150053 87168129 + MGP_WSBEiJ_P0034673 Cipc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034674.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150109 87166289 + MGP_WSBEiJ_P0034674 Cipc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034675.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150353 87169684 + MGP_WSBEiJ_P0034675 Cipc protein_coding protein_coding MGP_WSBEiJ_T0034676.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150406 87156176 + Cipc protein_coding retained_intron MGP_WSBEiJ_T0034677.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150428 87164711 + MGP_WSBEiJ_P0034677 Cipc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034678.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150464 87164710 + MGP_WSBEiJ_P0034678 Cipc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034679.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150476 87164627 + MGP_WSBEiJ_P0034679 Cipc protein_coding protein_coding MGP_WSBEiJ_T0034680.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87150500 87166205 + MGP_WSBEiJ_P0034680 Cipc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034681.1 MGP_WSBEiJ_G0019320.1 mouse_genomes_project 12 87155667 87167155 + MGP_WSBEiJ_P0034681 Cipc protein_coding protein_coding MGP_WSBEiJ_T0033685.1 MGP_WSBEiJ_G0018972.1 mouse_genomes_project 12 14671567 14713611 - MGP_WSBEiJ_P0033685 Atp6v1c2 protein_coding protein_coding MGP_WSBEiJ_T0033686.1 MGP_WSBEiJ_G0018972.1 mouse_genomes_project 12 14671568 14713564 - MGP_WSBEiJ_P0033686 Atp6v1c2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033687.1 MGP_WSBEiJ_G0018972.1 mouse_genomes_project 12 14671568 14713602 - MGP_WSBEiJ_P0033687 Atp6v1c2 protein_coding protein_coding MGP_WSBEiJ_T0033688.1 MGP_WSBEiJ_G0018972.1 mouse_genomes_project 12 14671569 14694731 - MGP_WSBEiJ_P0033688 Atp6v1c2 protein_coding protein_coding MGP_WSBEiJ_T0033689.1 MGP_WSBEiJ_G0018972.1 mouse_genomes_project 12 14671638 14714165 - MGP_WSBEiJ_P0033689 Atp6v1c2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033690.1 MGP_WSBEiJ_G0018972.1 mouse_genomes_project 12 14684147 14718216 - MGP_WSBEiJ_P0033690 Atp6v1c2 protein_coding protein_coding MGP_WSBEiJ_T0033691.1 MGP_WSBEiJ_G0018972.1 mouse_genomes_project 12 14694618 14713629 - MGP_WSBEiJ_P0033691 Atp6v1c2 protein_coding protein_coding MGP_WSBEiJ_T0033692.1 MGP_WSBEiJ_G0018972.1 mouse_genomes_project 12 14694662 14718227 - MGP_WSBEiJ_P0033692 Atp6v1c2 protein_coding protein_coding MGP_WSBEiJ_T0034188.1 MGP_WSBEiJ_G0019158.1 mouse_genomes_project 12 70215832 70244552 + MGP_WSBEiJ_P0034188 Actr10 protein_coding protein_coding MGP_WSBEiJ_T0006358.1 MGP_WSBEiJ_G0005299.1 mouse_genomes_project 12 103603954 103611145 - Gm21971 lincRNA lincRNA MGP_WSBEiJ_T0011135.1 MGP_WSBEiJ_G0009292.1 mouse_genomes_project 12 76235101 76235383 + Gm24010 misc_RNA misc_RNA MGP_WSBEiJ_T0034996.1 MGP_WSBEiJ_G0019425.1 mouse_genomes_project 12 106069597 106120063 - MGP_WSBEiJ_P0034996 Syne3 protein_coding protein_coding MGP_WSBEiJ_T0009650.1 MGP_WSBEiJ_G0007807.1 mouse_genomes_project 12 68777978 68778087 - Gm23018 miRNA miRNA MGP_WSBEiJ_T0034873.1 MGP_WSBEiJ_G0019373.1 mouse_genomes_project 12 102992278 103135766 + MGP_WSBEiJ_P0034873 Slc24a4 protein_coding protein_coding MGP_WSBEiJ_T0034874.1 MGP_WSBEiJ_G0019373.1 mouse_genomes_project 12 102992719 103135424 + MGP_WSBEiJ_P0034874 Slc24a4 protein_coding protein_coding MGP_WSBEiJ_T0034875.1 MGP_WSBEiJ_G0019373.1 mouse_genomes_project 12 102992935 103135172 + MGP_WSBEiJ_P0034875 Slc24a4 protein_coding protein_coding MGP_WSBEiJ_T0009724.1 MGP_WSBEiJ_G0007881.1 mouse_genomes_project 12 111190444 111190518 + Mir539 miRNA miRNA MGP_WSBEiJ_T0033641.1 MGP_WSBEiJ_G0018957.1 mouse_genomes_project 12 9451047 9565793 + MGP_WSBEiJ_P0033641 Fam49a protein_coding protein_coding MGP_WSBEiJ_T0033642.1 MGP_WSBEiJ_G0018957.1 mouse_genomes_project 12 9451047 9565793 + MGP_WSBEiJ_P0033642 Fam49a protein_coding protein_coding MGP_WSBEiJ_T0033815.1 MGP_WSBEiJ_G0019018.1 mouse_genomes_project 12 29457506 29756727 + MGP_WSBEiJ_P0033815 Cog5 protein_coding protein_coding MGP_WSBEiJ_T0033819.1 MGP_WSBEiJ_G0019018.1 mouse_genomes_project 12 29568034 29744837 + MGP_WSBEiJ_P0033819 Cog5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0003333.1 MGP_WSBEiJ_G0003064.1 mouse_genomes_project 12 79648091 79648396 + Gm28056 antisense antisense MGP_WSBEiJ_T0098983.1 MGP_WSBEiJ_G0037646.1 mouse_genomes_project 12 43329044 43329175 + Gm24731 snoRNA snoRNA MGP_WSBEiJ_T0009652.1 MGP_WSBEiJ_G0007809.1 mouse_genomes_project 12 71456123 71456232 - Gm24466 miRNA miRNA MGP_WSBEiJ_T0034312.1 MGP_WSBEiJ_G0019202.1 mouse_genomes_project 12 75868507 75879795 - MGP_WSBEiJ_P0034312 Zbtb25 protein_coding protein_coding MGP_WSBEiJ_T0034313.1 MGP_WSBEiJ_G0019202.1 mouse_genomes_project 12 75870036 75893101 - MGP_WSBEiJ_P0034313 Zbtb25 protein_coding protein_coding MGP_WSBEiJ_T0034314.1 MGP_WSBEiJ_G0019202.1 mouse_genomes_project 12 75870080 75892636 - MGP_WSBEiJ_P0034314 Zbtb25 protein_coding protein_coding MGP_WSBEiJ_T0034315.1 MGP_WSBEiJ_G0019202.1 mouse_genomes_project 12 75870081 75893239 - MGP_WSBEiJ_P0034315 Zbtb25 protein_coding protein_coding MGP_WSBEiJ_T0034316.1 MGP_WSBEiJ_G0019202.1 mouse_genomes_project 12 75871162 75893030 - MGP_WSBEiJ_P0034316 Zbtb25 protein_coding protein_coding MGP_WSBEiJ_T0034317.1 MGP_WSBEiJ_G0019202.1 mouse_genomes_project 12 75871279 75893101 - MGP_WSBEiJ_P0034317 Zbtb25 protein_coding protein_coding MGP_WSBEiJ_T0000824.1 MGP_WSBEiJ_G0000763.1 mouse_genomes_project 12 9800197 9800727 + TEC TEC MGP_WSBEiJ_T0035052.1 MGP_WSBEiJ_G0019444.1 mouse_genomes_project 12 109712562 109743324 + MGP_WSBEiJ_P0035052 Hhipl1 protein_coding protein_coding MGP_WSBEiJ_T0012527.1 MGP_WSBEiJ_G0010657.1 mouse_genomes_project 12 49741145 49741595 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033829.1 MGP_WSBEiJ_G0019021.1 mouse_genomes_project 12 29777575 29877425 - MGP_WSBEiJ_P0033829 Prkar2b protein_coding protein_coding MGP_WSBEiJ_T0034138.1 MGP_WSBEiJ_G0019141.1 mouse_genomes_project 12 68570162 68570786 - MGP_WSBEiJ_P0034138 Gm9887 protein_coding protein_coding MGP_WSBEiJ_T0034023.1 MGP_WSBEiJ_G0019100.1 mouse_genomes_project 12 54555855 54588941 + MGP_WSBEiJ_P0034023 Brms1l protein_coding protein_coding MGP_WSBEiJ_T0033719.1 MGP_WSBEiJ_G0018982.1 mouse_genomes_project 12 21992560 22073255 + MGP_WSBEiJ_P0033719 Taf1b protein_coding protein_coding MGP_WSBEiJ_T0035003.1 MGP_WSBEiJ_G0019430.1 mouse_genomes_project 12 106414862 106420853 - MGP_WSBEiJ_P0035003 Tcl1 protein_coding protein_coding MGP_WSBEiJ_T0035004.1 MGP_WSBEiJ_G0019430.1 mouse_genomes_project 12 106414870 106420832 - MGP_WSBEiJ_P0035004 Tcl1 protein_coding protein_coding MGP_WSBEiJ_T0035005.1 MGP_WSBEiJ_G0019430.1 mouse_genomes_project 12 106415420 106420822 - MGP_WSBEiJ_P0035005 Tcl1 protein_coding protein_coding MGP_WSBEiJ_T0035006.1 MGP_WSBEiJ_G0019430.1 mouse_genomes_project 12 106415610 106420909 - MGP_WSBEiJ_P0035006 Tcl1 protein_coding protein_coding MGP_WSBEiJ_T0035007.1 MGP_WSBEiJ_G0019430.1 mouse_genomes_project 12 106415706 106420812 - MGP_WSBEiJ_P0035007 Tcl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035008.1 MGP_WSBEiJ_G0019430.1 mouse_genomes_project 12 106416403 106420741 - Tcl1 protein_coding processed_transcript MGP_WSBEiJ_T0000126.1 MGP_WSBEiJ_G0000095.1 mouse_genomes_project 12 118083421 118083823 - MGP_WSBEiJ_P0000126 IG_V_gene IG_V_gene MGP_WSBEiJ_T0012557.1 MGP_WSBEiJ_G0010687.1 mouse_genomes_project 12 96583122 96583476 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009676.1 MGP_WSBEiJ_G0007833.1 mouse_genomes_project 12 110995654 110995734 + Mir1906-2 miRNA miRNA MGP_WSBEiJ_T0033974.1 MGP_WSBEiJ_G0019078.1 mouse_genomes_project 12 50594817 50803128 + MGP_WSBEiJ_P0033974 Nubpl protein_coding protein_coding MGP_WSBEiJ_T0033975.1 MGP_WSBEiJ_G0019078.1 mouse_genomes_project 12 50594836 50635909 + Nubpl protein_coding retained_intron MGP_WSBEiJ_T0033976.1 MGP_WSBEiJ_G0019078.1 mouse_genomes_project 12 50594841 50598163 + Nubpl protein_coding retained_intron MGP_WSBEiJ_T0033977.1 MGP_WSBEiJ_G0019078.1 mouse_genomes_project 12 50623484 50792781 + MGP_WSBEiJ_P0033977 Nubpl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009658.1 MGP_WSBEiJ_G0007815.1 mouse_genomes_project 12 80940710 80940794 + Mir3067 miRNA miRNA MGP_WSBEiJ_T0035080.1 MGP_WSBEiJ_G0019453.1 mouse_genomes_project 12 110353585 110496273 + MGP_WSBEiJ_P0035080 Wdr25 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033962.1 MGP_WSBEiJ_G0019070.1 mouse_genomes_project 12 49823585 49900975 + MGP_WSBEiJ_P0033962 Scfd1 protein_coding protein_coding MGP_WSBEiJ_T0099020.1 MGP_WSBEiJ_G0037683.1 mouse_genomes_project 12 111113642 111113714 + DQ267102 snoRNA snoRNA MGP_WSBEiJ_T0000263.1 MGP_WSBEiJ_G0000211.1 mouse_genomes_project 12 116954479 116954780 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034972.1 MGP_WSBEiJ_G0019407.1 mouse_genomes_project 12 104950728 104969821 - MGP_WSBEiJ_P0034972 Serpina9 protein_coding protein_coding MGP_WSBEiJ_T0034973.1 MGP_WSBEiJ_G0019407.1 mouse_genomes_project 12 104964464 104969924 - MGP_WSBEiJ_P0034973 Serpina9 protein_coding protein_coding MGP_WSBEiJ_T0033816.1 MGP_WSBEiJ_G0019019.1 mouse_genomes_project 12 29512910 29519970 - MGP_WSBEiJ_P0033816 Gpr22 protein_coding protein_coding MGP_WSBEiJ_T0033817.1 MGP_WSBEiJ_G0019019.1 mouse_genomes_project 12 29514755 29519991 - MGP_WSBEiJ_P0033817 Gpr22 protein_coding protein_coding MGP_WSBEiJ_T0033818.1 MGP_WSBEiJ_G0019019.1 mouse_genomes_project 12 29515492 29519977 - MGP_WSBEiJ_P0033818 Gpr22 protein_coding protein_coding MGP_WSBEiJ_T0000075.1 MGP_WSBEiJ_G0000061.1 mouse_genomes_project 12 116131696 116132130 - MGP_WSBEiJ_P0000075 Ighv3-3 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000076.1 MGP_WSBEiJ_G0000061.1 mouse_genomes_project 12 116131696 116131992 - MGP_WSBEiJ_P0000076 Ighv3-3 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033934.1 MGP_WSBEiJ_G0019058.1 mouse_genomes_project 12 39655732 39694682 - MGP_WSBEiJ_P0033934 Lrrn3 protein_coding protein_coding MGP_WSBEiJ_T0100513.1 MGP_WSBEiJ_G0038971.1 mouse_genomes_project 12 104683037 104692645 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0034053.1 MGP_WSBEiJ_G0019112.1 mouse_genomes_project 12 57828629 57885540 - MGP_WSBEiJ_P0034053 Sec23a protein_coding protein_coding MGP_WSBEiJ_T0034054.1 MGP_WSBEiJ_G0019112.1 mouse_genomes_project 12 57829950 57880758 - MGP_WSBEiJ_P0034054 Sec23a protein_coding protein_coding MGP_WSBEiJ_T0034055.1 MGP_WSBEiJ_G0019112.1 mouse_genomes_project 12 57837891 57842942 - Sec23a protein_coding retained_intron MGP_WSBEiJ_T0034056.1 MGP_WSBEiJ_G0019112.1 mouse_genomes_project 12 57845360 57856407 - Sec23a protein_coding retained_intron MGP_WSBEiJ_T0034057.1 MGP_WSBEiJ_G0019112.1 mouse_genomes_project 12 57880176 57885540 - Sec23a protein_coding retained_intron MGP_WSBEiJ_T0034959.1 MGP_WSBEiJ_G0019402.1 mouse_genomes_project 12 104662482 104673091 - MGP_WSBEiJ_P0034959 protein_coding protein_coding MGP_WSBEiJ_T0034960.1 MGP_WSBEiJ_G0019402.1 mouse_genomes_project 12 104662482 104673095 - MGP_WSBEiJ_P0034960 protein_coding protein_coding MGP_WSBEiJ_T0098970.1 MGP_WSBEiJ_G0037633.1 mouse_genomes_project 12 18726415 18726549 + Gm25821 snoRNA snoRNA MGP_WSBEiJ_T0000233.1 MGP_WSBEiJ_G0000181.1 mouse_genomes_project 12 115606331 115606758 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0016707.1 MGP_WSBEiJ_G0014649.1 mouse_genomes_project 12 81332200 81334136 - Gm17191 processed_transcript processed_transcript MGP_WSBEiJ_T0098989.1 MGP_WSBEiJ_G0037652.1 mouse_genomes_project 12 58011874 58011996 + Gm24233 snoRNA snoRNA MGP_WSBEiJ_T0000245.1 MGP_WSBEiJ_G0000193.1 mouse_genomes_project 12 116250554 116250845 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0000232.1 MGP_WSBEiJ_G0000180.1 mouse_genomes_project 12 115512563 115513038 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034815.1 MGP_WSBEiJ_G0019355.1 mouse_genomes_project 12 100403571 100580923 - MGP_WSBEiJ_P0034815 Efcab11 protein_coding protein_coding MGP_WSBEiJ_T0011129.1 MGP_WSBEiJ_G0009286.1 mouse_genomes_project 12 45129552 45129801 - Gm25051 misc_RNA misc_RNA MGP_WSBEiJ_T0009723.1 MGP_WSBEiJ_G0007880.1 mouse_genomes_project 12 111190423 111190538 - Gm44322 miRNA miRNA MGP_WSBEiJ_T0016718.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111059710 111063251 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016719.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111059715 111101834 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016720.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111059816 111083735 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016721.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111076037 111102779 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016722.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111076037 111090702 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016723.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111081783 111101900 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016724.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111089274 111092745 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016725.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111090428 111099936 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016726.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111090672 111102702 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016727.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111100413 111101881 + Rian processed_transcript TEC MGP_WSBEiJ_T0016728.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111102579 111122875 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016729.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111102600 111112307 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016730.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111103937 111119246 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016731.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111106467 111107648 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016732.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111107365 111113167 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016733.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111107977 111120464 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016734.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111107981 111113188 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016735.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111108309 111119192 + Rian processed_transcript lincRNA MGP_WSBEiJ_T0016736.1 MGP_WSBEiJ_G0014657.1 mouse_genomes_project 12 111114585 111118569 + Rian processed_transcript TEC MGP_WSBEiJ_T0034095.1 MGP_WSBEiJ_G0019122.1 mouse_genomes_project 12 63907419 63914092 + MGP_WSBEiJ_P0034095 Gm527 protein_coding protein_coding MGP_WSBEiJ_T0006346.1 MGP_WSBEiJ_G0005287.1 mouse_genomes_project 12 86431998 86455595 - 4732487G21Rik lincRNA lincRNA MGP_WSBEiJ_T0000833.1 MGP_WSBEiJ_G0000772.1 mouse_genomes_project 12 82987866 82988806 + TEC TEC MGP_WSBEiJ_T0000252.1 MGP_WSBEiJ_G0000200.1 mouse_genomes_project 12 116537687 116538119 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0035197.1 MGP_WSBEiJ_G0019488.1 mouse_genomes_project 12 113574578 113580127 - MGP_WSBEiJ_P0035197 2010107E04Rik protein_coding protein_coding MGP_WSBEiJ_T0033568.1 MGP_WSBEiJ_G0018926.1 mouse_genomes_project 12 1630017 1648721 - MGP_WSBEiJ_P0033568 Fam228b protein_coding protein_coding MGP_WSBEiJ_T0096941.1 MGP_WSBEiJ_G0035622.1 mouse_genomes_project 12 105090026 105090134 + Gm23289 rRNA rRNA MGP_WSBEiJ_T0000029.1 MGP_WSBEiJ_G0000023.1 mouse_genomes_project 12 115263296 115263319 - MGP_WSBEiJ_P0000029 Gm16968 IG_D_gene IG_D_gene MGP_WSBEiJ_T0033857.1 MGP_WSBEiJ_G0019028.1 mouse_genomes_project 12 31258427 31265969 + MGP_WSBEiJ_P0033857 Efcab10 protein_coding protein_coding MGP_WSBEiJ_T0009702.1 MGP_WSBEiJ_G0007859.1 mouse_genomes_project 12 111174100 111174212 - Gm25750 miRNA miRNA MGP_WSBEiJ_T0011126.1 MGP_WSBEiJ_G0009283.1 mouse_genomes_project 12 15060568 15060865 - Gm25925 misc_RNA misc_RNA MGP_WSBEiJ_T0033905.1 MGP_WSBEiJ_G0019050.1 mouse_genomes_project 12 38136884 38168671 - MGP_WSBEiJ_P0033905 Arl4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033906.1 MGP_WSBEiJ_G0019050.1 mouse_genomes_project 12 38136884 38168680 - MGP_WSBEiJ_P0033906 Arl4a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033907.1 MGP_WSBEiJ_G0019050.1 mouse_genomes_project 12 38140947 38145800 - Arl4a protein_coding processed_transcript MGP_WSBEiJ_T0033908.1 MGP_WSBEiJ_G0019050.1 mouse_genomes_project 12 38164596 38168733 - MGP_WSBEiJ_P0033908 Arl4a protein_coding protein_coding MGP_WSBEiJ_T0033909.1 MGP_WSBEiJ_G0019050.1 mouse_genomes_project 12 38167127 38169329 - MGP_WSBEiJ_P0033909 Arl4a protein_coding protein_coding MGP_WSBEiJ_T0098994.1 MGP_WSBEiJ_G0037657.1 mouse_genomes_project 12 64408600 64408725 - Gm26015 snoRNA snoRNA MGP_WSBEiJ_T0034052.1 MGP_WSBEiJ_G0019111.1 mouse_genomes_project 12 57120684 57125223 - MGP_WSBEiJ_P0034052 Clec14a protein_coding protein_coding MGP_WSBEiJ_T0033627.1 MGP_WSBEiJ_G0018947.1 mouse_genomes_project 12 6554211 6555190 + MGP_WSBEiJ_P0033627 protein_coding protein_coding MGP_WSBEiJ_T0033636.1 MGP_WSBEiJ_G0018952.1 mouse_genomes_project 12 8371491 8372058 - MGP_WSBEiJ_P0033636 Msgn1 protein_coding protein_coding MGP_WSBEiJ_T0096923.1 MGP_WSBEiJ_G0035604.1 mouse_genomes_project 12 1200703 1200817 + Gm23756 rRNA rRNA MGP_WSBEiJ_T0098985.1 MGP_WSBEiJ_G0037648.1 mouse_genomes_project 12 47947014 47947142 - Gm25015 snoRNA snoRNA MGP_WSBEiJ_T0003324.1 MGP_WSBEiJ_G0003057.1 mouse_genomes_project 12 55449169 55452217 - Gm15524 antisense antisense MGP_WSBEiJ_T0099010.1 MGP_WSBEiJ_G0037673.1 mouse_genomes_project 12 111087558 111087633 + Gm24564 snoRNA snoRNA MGP_WSBEiJ_T0009657.1 MGP_WSBEiJ_G0007814.1 mouse_genomes_project 12 80115473 80115538 - Mir1843a miRNA miRNA MGP_WSBEiJ_T0099029.1 MGP_WSBEiJ_G0037692.1 mouse_genomes_project 12 111146792 111146865 + Gm23787 snoRNA snoRNA MGP_WSBEiJ_T0034361.1 MGP_WSBEiJ_G0019224.1 mouse_genomes_project 12 78714838 78725128 - MGP_WSBEiJ_P0034361 Pigh protein_coding protein_coding MGP_WSBEiJ_T0035139.1 MGP_WSBEiJ_G0019471.1 mouse_genomes_project 12 112738741 112815155 + MGP_WSBEiJ_P0035139 Traf3 protein_coding protein_coding MGP_WSBEiJ_T0035140.1 MGP_WSBEiJ_G0019471.1 mouse_genomes_project 12 112795917 112843073 + MGP_WSBEiJ_P0035140 Traf3 protein_coding protein_coding MGP_WSBEiJ_T0035141.1 MGP_WSBEiJ_G0019471.1 mouse_genomes_project 12 112795917 112843069 + MGP_WSBEiJ_P0035141 Traf3 protein_coding protein_coding MGP_WSBEiJ_T0035142.1 MGP_WSBEiJ_G0019471.1 mouse_genomes_project 12 112813639 112843078 + MGP_WSBEiJ_P0035142 Traf3 protein_coding protein_coding MGP_WSBEiJ_T0035143.1 MGP_WSBEiJ_G0019471.1 mouse_genomes_project 12 112824612 112838485 + Traf3 protein_coding retained_intron MGP_WSBEiJ_T0009719.1 MGP_WSBEiJ_G0007876.1 mouse_genomes_project 12 111186088 111186156 + Mir376a miRNA miRNA MGP_WSBEiJ_T0035137.1 MGP_WSBEiJ_G0019469.1 mouse_genomes_project 12 112602151 112684278 + MGP_WSBEiJ_P0035137 Rcor1 protein_coding protein_coding MGP_WSBEiJ_T0034926.1 MGP_WSBEiJ_G0019391.1 mouse_genomes_project 12 104301922 104319304 + MGP_WSBEiJ_P0034926 Otub2 protein_coding protein_coding MGP_WSBEiJ_T0034927.1 MGP_WSBEiJ_G0019391.1 mouse_genomes_project 12 104301938 104319310 + MGP_WSBEiJ_P0034927 Otub2 protein_coding protein_coding MGP_WSBEiJ_T0034928.1 MGP_WSBEiJ_G0019391.1 mouse_genomes_project 12 104302006 104319310 + Otub2 protein_coding retained_intron MGP_WSBEiJ_T0034929.1 MGP_WSBEiJ_G0019391.1 mouse_genomes_project 12 104302225 104315866 + MGP_WSBEiJ_P0034929 Otub2 protein_coding protein_coding MGP_WSBEiJ_T0034930.1 MGP_WSBEiJ_G0019391.1 mouse_genomes_project 12 104305894 104319315 + MGP_WSBEiJ_P0034930 Otub2 protein_coding protein_coding MGP_WSBEiJ_T0009659.1 MGP_WSBEiJ_G0007816.1 mouse_genomes_project 12 85321238 85321301 - Mir6938 miRNA miRNA MGP_WSBEiJ_T0034556.1 MGP_WSBEiJ_G0019280.1 mouse_genomes_project 12 84419433 84446874 + MGP_WSBEiJ_P0034556 Bbof1 protein_coding protein_coding MGP_WSBEiJ_T0034557.1 MGP_WSBEiJ_G0019280.1 mouse_genomes_project 12 84423597 84441523 + MGP_WSBEiJ_P0034557 Bbof1 protein_coding protein_coding MGP_WSBEiJ_T0034559.1 MGP_WSBEiJ_G0019280.1 mouse_genomes_project 12 84431883 84443481 + MGP_WSBEiJ_P0034559 Bbof1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033634.1 MGP_WSBEiJ_G0018951.1 mouse_genomes_project 12 8259985 8315929 - MGP_WSBEiJ_P0033634 Kcns3 protein_coding protein_coding MGP_WSBEiJ_T0033635.1 MGP_WSBEiJ_G0018951.1 mouse_genomes_project 12 8259985 8315460 - MGP_WSBEiJ_P0033635 Kcns3 protein_coding protein_coding MGP_WSBEiJ_T0000118.1 MGP_WSBEiJ_G0000090.1 mouse_genomes_project 12 117033953 117377000 - MGP_WSBEiJ_P0000118 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033614.1 MGP_WSBEiJ_G0018942.1 mouse_genomes_project 12 5862001 5882786 + MGP_WSBEiJ_P0033614 Sdc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033615.1 MGP_WSBEiJ_G0018942.1 mouse_genomes_project 12 5862311 5880862 + Sdc1 protein_coding retained_intron MGP_WSBEiJ_T0033616.1 MGP_WSBEiJ_G0018942.1 mouse_genomes_project 12 5862790 5881427 + Sdc1 protein_coding processed_transcript MGP_WSBEiJ_T0097765.1 MGP_WSBEiJ_G0036428.1 mouse_genomes_project 12 57911624 57911815 + Gm22973 snRNA snRNA MGP_WSBEiJ_T0006318.1 MGP_WSBEiJ_G0005266.1 mouse_genomes_project 12 35095934 35104841 - Gm29007 lincRNA lincRNA MGP_WSBEiJ_T0033680.1 MGP_WSBEiJ_G0018971.1 mouse_genomes_project 12 14653372 14668640 + Pdia6 protein_coding retained_intron MGP_WSBEiJ_T0033681.1 MGP_WSBEiJ_G0018971.1 mouse_genomes_project 12 14653372 14671617 + MGP_WSBEiJ_P0033681 Pdia6 protein_coding protein_coding MGP_WSBEiJ_T0033682.1 MGP_WSBEiJ_G0018971.1 mouse_genomes_project 12 14653435 14661060 + Pdia6 protein_coding processed_transcript MGP_WSBEiJ_T0033683.1 MGP_WSBEiJ_G0018971.1 mouse_genomes_project 12 14660673 14664482 + Pdia6 protein_coding retained_intron MGP_WSBEiJ_T0033684.1 MGP_WSBEiJ_G0018971.1 mouse_genomes_project 12 14664072 14665771 + Pdia6 protein_coding processed_transcript MGP_WSBEiJ_T0006297.1 MGP_WSBEiJ_G0005249.1 mouse_genomes_project 12 4381557 4389892 - 1700101O22Rik lincRNA lincRNA MGP_WSBEiJ_T0035310.1 MGP_WSBEiJ_G0019528.1 mouse_genomes_project 12 120416015 120483362 - MGP_WSBEiJ_P0035310 Sp4 protein_coding protein_coding MGP_WSBEiJ_T0034084.1 MGP_WSBEiJ_G0019118.1 mouse_genomes_project 12 58079694 58098721 - MGP_WSBEiJ_P0034084 Fbxo33 protein_coding protein_coding MGP_WSBEiJ_T0034085.1 MGP_WSBEiJ_G0019118.1 mouse_genomes_project 12 58079696 58083477 - MGP_WSBEiJ_P0034085 Fbxo33 protein_coding protein_coding MGP_WSBEiJ_T0034086.1 MGP_WSBEiJ_G0019118.1 mouse_genomes_project 12 58079697 58084730 - Fbxo33 protein_coding retained_intron MGP_WSBEiJ_T0034087.1 MGP_WSBEiJ_G0019118.1 mouse_genomes_project 12 58083592 58097797 - MGP_WSBEiJ_P0034087 Fbxo33 protein_coding protein_coding MGP_WSBEiJ_T0034816.1 MGP_WSBEiJ_G0019356.1 mouse_genomes_project 12 100581997 100635589 + Tdp1 protein_coding retained_intron MGP_WSBEiJ_T0034817.1 MGP_WSBEiJ_G0019356.1 mouse_genomes_project 12 100582011 100585266 + Tdp1 protein_coding processed_transcript MGP_WSBEiJ_T0034818.1 MGP_WSBEiJ_G0019356.1 mouse_genomes_project 12 100582014 100655192 + MGP_WSBEiJ_P0034818 Tdp1 protein_coding protein_coding MGP_WSBEiJ_T0034819.1 MGP_WSBEiJ_G0019356.1 mouse_genomes_project 12 100583964 100588703 + MGP_WSBEiJ_P0034819 Tdp1 protein_coding protein_coding MGP_WSBEiJ_T0034820.1 MGP_WSBEiJ_G0019356.1 mouse_genomes_project 12 100588537 100655187 + MGP_WSBEiJ_P0034820 Tdp1 protein_coding protein_coding MGP_WSBEiJ_T0034821.1 MGP_WSBEiJ_G0019356.1 mouse_genomes_project 12 100609021 100609953 + Tdp1 protein_coding retained_intron MGP_WSBEiJ_T0034822.1 MGP_WSBEiJ_G0019356.1 mouse_genomes_project 12 100611379 100655192 + Tdp1 protein_coding retained_intron MGP_WSBEiJ_T0011124.1 MGP_WSBEiJ_G0009281.1 mouse_genomes_project 12 1250204 1250490 + Gm22343 misc_RNA misc_RNA MGP_WSBEiJ_T0006323.1 MGP_WSBEiJ_G0005270.1 mouse_genomes_project 12 51096816 51099157 - 1700031P21Rik lincRNA lincRNA MGP_WSBEiJ_T0006324.1 MGP_WSBEiJ_G0005270.1 mouse_genomes_project 12 51098430 51099153 - 1700031P21Rik lincRNA lincRNA MGP_WSBEiJ_T0006325.1 MGP_WSBEiJ_G0005270.1 mouse_genomes_project 12 51098448 51099154 - 1700031P21Rik lincRNA lincRNA MGP_WSBEiJ_T0000133.1 MGP_WSBEiJ_G0000100.1 mouse_genomes_project 12 118083422 118083910 - MGP_WSBEiJ_P0000133 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033591.1 MGP_WSBEiJ_G0018936.1 mouse_genomes_project 12 5233711 5320894 + MGP_WSBEiJ_P0033591 Ldah protein_coding protein_coding MGP_WSBEiJ_T0097780.1 MGP_WSBEiJ_G0036443.1 mouse_genomes_project 12 80365876 80365980 - Gm23817 snRNA snRNA MGP_WSBEiJ_T0033718.1 MGP_WSBEiJ_G0018981.1 mouse_genomes_project 12 21985098 21985548 - MGP_WSBEiJ_P0033718 Gm16372 protein_coding protein_coding MGP_WSBEiJ_T0034189.1 MGP_WSBEiJ_G0019159.1 mouse_genomes_project 12 70256337 70277392 + Psma3 protein_coding retained_intron MGP_WSBEiJ_T0034190.1 MGP_WSBEiJ_G0019159.1 mouse_genomes_project 12 70256337 70277812 + MGP_WSBEiJ_P0034190 Psma3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034191.1 MGP_WSBEiJ_G0019159.1 mouse_genomes_project 12 70256359 70277395 + MGP_WSBEiJ_P0034191 Psma3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034192.1 MGP_WSBEiJ_G0019159.1 mouse_genomes_project 12 70256363 70277286 + MGP_WSBEiJ_P0034192 Psma3 protein_coding protein_coding MGP_WSBEiJ_T0034193.1 MGP_WSBEiJ_G0019159.1 mouse_genomes_project 12 70256374 70262442 + Psma3 protein_coding retained_intron MGP_WSBEiJ_T0034194.1 MGP_WSBEiJ_G0019159.1 mouse_genomes_project 12 70256381 70277366 + MGP_WSBEiJ_P0034194 Psma3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034195.1 MGP_WSBEiJ_G0019159.1 mouse_genomes_project 12 70256385 70267724 + Psma3 protein_coding retained_intron MGP_WSBEiJ_T0034196.1 MGP_WSBEiJ_G0019159.1 mouse_genomes_project 12 70269778 70277396 + MGP_WSBEiJ_P0034196 Psma3 protein_coding protein_coding MGP_WSBEiJ_T0033500.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382818 605378 + MGP_WSBEiJ_P0033500 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033501.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382828 604980 + MGP_WSBEiJ_P0033501 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033502.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382854 604941 + MGP_WSBEiJ_P0033502 Dtnb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033503.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382878 604980 + MGP_WSBEiJ_P0033503 Dtnb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033504.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382879 461724 + MGP_WSBEiJ_P0033504 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033505.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382880 537448 + Dtnb protein_coding retained_intron MGP_WSBEiJ_T0033506.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382898 604977 + MGP_WSBEiJ_P0033506 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033507.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382908 604724 + MGP_WSBEiJ_P0033507 Dtnb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033508.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382910 604975 + MGP_WSBEiJ_P0033508 Dtnb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033509.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382911 474743 + Dtnb protein_coding processed_transcript MGP_WSBEiJ_T0033510.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382915 604977 + MGP_WSBEiJ_P0033510 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033511.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382920 604977 + MGP_WSBEiJ_P0033511 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033512.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382968 605087 + MGP_WSBEiJ_P0033512 Dtnb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033513.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 382981 409532 + MGP_WSBEiJ_P0033513 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033514.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 383065 572163 + MGP_WSBEiJ_P0033514 Dtnb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033515.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 383429 604973 + MGP_WSBEiJ_P0033515 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033516.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 400918 604977 + MGP_WSBEiJ_P0033516 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033517.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 432075 598174 + MGP_WSBEiJ_P0033517 Dtnb protein_coding unknown_likely_coding MGP_WSBEiJ_T0033518.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 444899 604977 + MGP_WSBEiJ_P0033518 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033519.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 502444 535327 + Dtnb protein_coding retained_intron MGP_WSBEiJ_T0033520.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 535898 569733 + Dtnb protein_coding processed_transcript MGP_WSBEiJ_T0033521.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 569548 604724 + Dtnb protein_coding retained_intron MGP_WSBEiJ_T0033522.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 569801 604980 + MGP_WSBEiJ_P0033522 Dtnb protein_coding protein_coding MGP_WSBEiJ_T0033523.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 597896 604980 + Dtnb protein_coding processed_transcript MGP_WSBEiJ_T0033524.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 598106 604979 + Dtnb protein_coding retained_intron MGP_WSBEiJ_T0033525.1 MGP_WSBEiJ_G0018913.1 mouse_genomes_project 12 603129 604980 + Dtnb protein_coding retained_intron MGP_WSBEiJ_T0035292.1 MGP_WSBEiJ_G0019521.1 mouse_genomes_project 12 118320811 118376123 - MGP_WSBEiJ_P0035292 Wdr60 protein_coding protein_coding MGP_WSBEiJ_T0099011.1 MGP_WSBEiJ_G0037674.1 mouse_genomes_project 12 111090237 111090312 + Gm23474 snoRNA snoRNA MGP_WSBEiJ_T0034223.1 MGP_WSBEiJ_G0019170.1 mouse_genomes_project 12 71533389 71557295 - Rtn1 protein_coding processed_transcript MGP_WSBEiJ_T0034224.1 MGP_WSBEiJ_G0019170.1 mouse_genomes_project 12 71533389 71733778 - MGP_WSBEiJ_P0034224 Rtn1 protein_coding protein_coding MGP_WSBEiJ_T0034225.1 MGP_WSBEiJ_G0019170.1 mouse_genomes_project 12 71533390 71558280 - MGP_WSBEiJ_P0034225 Rtn1 protein_coding protein_coding MGP_WSBEiJ_T0034226.1 MGP_WSBEiJ_G0019170.1 mouse_genomes_project 12 71533929 71558280 - MGP_WSBEiJ_P0034226 Rtn1 protein_coding protein_coding MGP_WSBEiJ_T0034227.1 MGP_WSBEiJ_G0019170.1 mouse_genomes_project 12 71544882 71558242 - Rtn1 protein_coding processed_transcript MGP_WSBEiJ_T0000056.1 MGP_WSBEiJ_G0000046.1 mouse_genomes_project 12 115316568 115317049 - MGP_WSBEiJ_P0000056 Ighv5-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000057.1 MGP_WSBEiJ_G0000046.1 mouse_genomes_project 12 115316568 115317049 - MGP_WSBEiJ_P0000057 Ighv5-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000071.1 MGP_WSBEiJ_G0000058.1 mouse_genomes_project 12 115802743 115803173 - MGP_WSBEiJ_P0000071 Ighv3-1 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000135.1 MGP_WSBEiJ_G0000102.1 mouse_genomes_project 12 118083422 118083877 - MGP_WSBEiJ_P0000135 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034329.1 MGP_WSBEiJ_G0019210.1 mouse_genomes_project 12 76297435 76315753 + MGP_WSBEiJ_P0034329 Churc1 protein_coding protein_coding MGP_WSBEiJ_T0034330.1 MGP_WSBEiJ_G0019210.1 mouse_genomes_project 12 76300327 76307764 + Churc1 protein_coding retained_intron MGP_WSBEiJ_T0034274.1 MGP_WSBEiJ_G0019189.1 mouse_genomes_project 12 73718219 73721234 + MGP_WSBEiJ_P0034274 Dbpht2 protein_coding protein_coding MGP_WSBEiJ_T0034895.1 MGP_WSBEiJ_G0019380.1 mouse_genomes_project 12 103629391 103648741 - MGP_WSBEiJ_P0034895 Gm20604 protein_coding protein_coding MGP_WSBEiJ_T0009736.1 MGP_WSBEiJ_G0007893.1 mouse_genomes_project 12 111205488 111205568 - Gm24321 miRNA miRNA MGP_WSBEiJ_T0009677.1 MGP_WSBEiJ_G0007834.1 mouse_genomes_project 12 111018521 111018615 + Mir770 miRNA miRNA MGP_WSBEiJ_T0034945.1 MGP_WSBEiJ_G0019397.1 mouse_genomes_project 12 104458376 104547488 + MGP_WSBEiJ_P0034945 Ppp4r4 protein_coding protein_coding MGP_WSBEiJ_T0034946.1 MGP_WSBEiJ_G0019397.1 mouse_genomes_project 12 104459324 104546561 + MGP_WSBEiJ_P0034946 Ppp4r4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034947.1 MGP_WSBEiJ_G0019397.1 mouse_genomes_project 12 104484999 104546723 + MGP_WSBEiJ_P0034947 Ppp4r4 protein_coding protein_coding MGP_WSBEiJ_T0034948.1 MGP_WSBEiJ_G0019397.1 mouse_genomes_project 12 104509886 104520088 + MGP_WSBEiJ_P0034948 Ppp4r4 protein_coding protein_coding MGP_WSBEiJ_T0034949.1 MGP_WSBEiJ_G0019397.1 mouse_genomes_project 12 104527460 104532207 + MGP_WSBEiJ_P0034949 Ppp4r4 protein_coding protein_coding MGP_WSBEiJ_T0006355.1 MGP_WSBEiJ_G0005296.1 mouse_genomes_project 12 100927835 100928662 - Gm26723 lincRNA lincRNA MGP_WSBEiJ_T0016717.1 MGP_WSBEiJ_G0014656.1 mouse_genomes_project 12 104935571 104952469 - Gm28577 processed_transcript processed_transcript MGP_WSBEiJ_T0000827.1 MGP_WSBEiJ_G0000766.1 mouse_genomes_project 12 55362897 55363761 - TEC TEC MGP_WSBEiJ_T0000226.1 MGP_WSBEiJ_G0000174.1 mouse_genomes_project 12 115467728 115468635 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0097753.1 MGP_WSBEiJ_G0036416.1 mouse_genomes_project 12 12171406 12171510 + Gm26449 snRNA snRNA MGP_WSBEiJ_T0034511.1 MGP_WSBEiJ_G0019270.1 mouse_genomes_project 12 84018495 84025232 + MGP_WSBEiJ_P0034511 Acot5 protein_coding protein_coding MGP_WSBEiJ_T0034512.1 MGP_WSBEiJ_G0019270.1 mouse_genomes_project 12 84018495 84025231 + MGP_WSBEiJ_P0034512 Acot5 protein_coding protein_coding MGP_WSBEiJ_T0034561.1 MGP_WSBEiJ_G0019283.1 mouse_genomes_project 12 84465044 84495164 + MGP_WSBEiJ_P0034561 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0034837.1 MGP_WSBEiJ_G0019363.1 mouse_genomes_project 12 101529047 101629482 + MGP_WSBEiJ_P0034837 9030617O03Rik protein_coding protein_coding MGP_WSBEiJ_T0034838.1 MGP_WSBEiJ_G0019363.1 mouse_genomes_project 12 101529068 101629226 + MGP_WSBEiJ_P0034838 9030617O03Rik protein_coding protein_coding MGP_WSBEiJ_T0034839.1 MGP_WSBEiJ_G0019363.1 mouse_genomes_project 12 101529076 101656649 + MGP_WSBEiJ_P0034839 9030617O03Rik protein_coding protein_coding MGP_WSBEiJ_T0034840.1 MGP_WSBEiJ_G0019363.1 mouse_genomes_project 12 101529085 101629226 + MGP_WSBEiJ_P0034840 9030617O03Rik protein_coding protein_coding MGP_WSBEiJ_T0034841.1 MGP_WSBEiJ_G0019363.1 mouse_genomes_project 12 101529126 101595142 + MGP_WSBEiJ_P0034841 9030617O03Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034842.1 MGP_WSBEiJ_G0019363.1 mouse_genomes_project 12 101537159 101629220 + MGP_WSBEiJ_P0034842 9030617O03Rik protein_coding protein_coding MGP_WSBEiJ_T0034843.1 MGP_WSBEiJ_G0019363.1 mouse_genomes_project 12 101622865 101632247 + MGP_WSBEiJ_P0034843 9030617O03Rik protein_coding protein_coding MGP_WSBEiJ_T0034848.1 MGP_WSBEiJ_G0019363.1 mouse_genomes_project 12 101645571 101655157 + 9030617O03Rik protein_coding processed_transcript MGP_WSBEiJ_T0035234.1 MGP_WSBEiJ_G0019502.1 mouse_genomes_project 12 114416303 114427082 + MGP_WSBEiJ_P0035234 Pld4 protein_coding protein_coding MGP_WSBEiJ_T0035160.1 MGP_WSBEiJ_G0019477.1 mouse_genomes_project 12 113061596 113062809 - MGP_WSBEiJ_P0035160 Gm266 protein_coding protein_coding MGP_WSBEiJ_T0034991.1 MGP_WSBEiJ_G0019421.1 mouse_genomes_project 12 105588533 105591532 + MGP_WSBEiJ_P0034991 Gm1000 protein_coding protein_coding MGP_WSBEiJ_T0006310.1 MGP_WSBEiJ_G0005259.1 mouse_genomes_project 12 26166075 26170310 - 1700022F17Rik lincRNA lincRNA MGP_WSBEiJ_T0009687.1 MGP_WSBEiJ_G0007844.1 mouse_genomes_project 12 111046377 111046501 + Mir433 miRNA miRNA MGP_WSBEiJ_T0000262.1 MGP_WSBEiJ_G0000210.1 mouse_genomes_project 12 116922809 116923243 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0033978.1 MGP_WSBEiJ_G0019079.1 mouse_genomes_project 12 50997703 51064286 + MGP_WSBEiJ_P0033978 Arhgap5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0097758.1 MGP_WSBEiJ_G0036421.1 mouse_genomes_project 12 50207634 50207736 - Gm22663 snRNA snRNA MGP_WSBEiJ_T0009704.1 MGP_WSBEiJ_G0007861.1 mouse_genomes_project 12 111174638 111174758 + Mir1197 miRNA miRNA MGP_WSBEiJ_T0006334.1 MGP_WSBEiJ_G0005277.1 mouse_genomes_project 12 77786139 77799186 + lincRNA lincRNA MGP_WSBEiJ_T0006335.1 MGP_WSBEiJ_G0005277.1 mouse_genomes_project 12 77787627 77791260 + lincRNA lincRNA MGP_WSBEiJ_T0006336.1 MGP_WSBEiJ_G0005277.1 mouse_genomes_project 12 77791180 77799285 + lincRNA lincRNA MGP_WSBEiJ_T0009725.1 MGP_WSBEiJ_G0007882.1 mouse_genomes_project 12 111191152 111191275 + Gm27379 miRNA miRNA MGP_WSBEiJ_T0009706.1 MGP_WSBEiJ_G0007863.1 mouse_genomes_project 12 111175131 111175212 + Mir758 miRNA miRNA MGP_WSBEiJ_T0034913.1 MGP_WSBEiJ_G0019388.1 mouse_genomes_project 12 104103836 104152183 - MGP_WSBEiJ_P0034913 Prima1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034914.1 MGP_WSBEiJ_G0019388.1 mouse_genomes_project 12 104106302 104112304 - Prima1 protein_coding processed_transcript MGP_WSBEiJ_T0034915.1 MGP_WSBEiJ_G0019388.1 mouse_genomes_project 12 104106302 104151737 - MGP_WSBEiJ_P0034915 Prima1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034916.1 MGP_WSBEiJ_G0019388.1 mouse_genomes_project 12 104106302 104151741 - MGP_WSBEiJ_P0034916 Prima1 protein_coding protein_coding MGP_WSBEiJ_T0034917.1 MGP_WSBEiJ_G0019388.1 mouse_genomes_project 12 104106662 104151719 - MGP_WSBEiJ_P0034917 Prima1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034918.1 MGP_WSBEiJ_G0019388.1 mouse_genomes_project 12 104145225 104145611 - Prima1 protein_coding processed_transcript MGP_WSBEiJ_T0009707.1 MGP_WSBEiJ_G0007864.1 mouse_genomes_project 12 111175802 111175899 + Mir329 miRNA miRNA MGP_WSBEiJ_T0034097.1 MGP_WSBEiJ_G0019124.1 mouse_genomes_project 12 63959646 64021543 + MGP_WSBEiJ_P0034097 Fam179b protein_coding protein_coding MGP_WSBEiJ_T0034098.1 MGP_WSBEiJ_G0019124.1 mouse_genomes_project 12 63959881 64021549 + MGP_WSBEiJ_P0034098 Fam179b protein_coding unknown_likely_coding MGP_WSBEiJ_T0034006.1 MGP_WSBEiJ_G0019093.1 mouse_genomes_project 12 53964881 53991315 - MGP_WSBEiJ_P0034006 Ppp2r3c protein_coding protein_coding MGP_WSBEiJ_T0034332.1 MGP_WSBEiJ_G0019212.1 mouse_genomes_project 12 76331533 76359258 - MGP_WSBEiJ_P0034332 Rab15 protein_coding protein_coding MGP_WSBEiJ_T0034333.1 MGP_WSBEiJ_G0019212.1 mouse_genomes_project 12 76333448 76334409 - Rab15 protein_coding retained_intron MGP_WSBEiJ_T0034334.1 MGP_WSBEiJ_G0019212.1 mouse_genomes_project 12 76333696 76339048 - MGP_WSBEiJ_P0034334 Rab15 protein_coding protein_coding MGP_WSBEiJ_T0034335.1 MGP_WSBEiJ_G0019212.1 mouse_genomes_project 12 76333904 76359671 - MGP_WSBEiJ_P0034335 Rab15 protein_coding protein_coding MGP_WSBEiJ_T0034336.1 MGP_WSBEiJ_G0019212.1 mouse_genomes_project 12 76334140 76355861 - MGP_WSBEiJ_P0034336 Rab15 protein_coding protein_coding MGP_WSBEiJ_T0034337.1 MGP_WSBEiJ_G0019212.1 mouse_genomes_project 12 76336451 76359225 - Rab15 protein_coding retained_intron MGP_WSBEiJ_T0000073.1 MGP_WSBEiJ_G0000060.1 mouse_genomes_project 12 116095250 116095680 - MGP_WSBEiJ_P0000073 Ighv14-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000074.1 MGP_WSBEiJ_G0000060.1 mouse_genomes_project 12 116095256 116095675 - MGP_WSBEiJ_P0000074 Ighv14-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0009696.1 MGP_WSBEiJ_G0007853.1 mouse_genomes_project 12 111073968 111074047 + Mir370 miRNA miRNA MGP_WSBEiJ_T0033766.1 MGP_WSBEiJ_G0019003.1 mouse_genomes_project 12 27685162 27769074 + MGP_WSBEiJ_P0033766 Pxdn protein_coding protein_coding MGP_WSBEiJ_T0033767.1 MGP_WSBEiJ_G0019003.1 mouse_genomes_project 12 27685176 27737837 + Pxdn protein_coding retained_intron MGP_WSBEiJ_T0033768.1 MGP_WSBEiJ_G0019003.1 mouse_genomes_project 12 27685176 27737285 + MGP_WSBEiJ_P0033768 Pxdn protein_coding protein_coding MGP_WSBEiJ_T0033769.1 MGP_WSBEiJ_G0019003.1 mouse_genomes_project 12 27745554 27752650 + Pxdn protein_coding processed_transcript MGP_WSBEiJ_T0033770.1 MGP_WSBEiJ_G0019003.1 mouse_genomes_project 12 27745560 27750101 + Pxdn protein_coding retained_intron MGP_WSBEiJ_T0033771.1 MGP_WSBEiJ_G0019003.1 mouse_genomes_project 12 27750129 27752792 + Pxdn protein_coding retained_intron MGP_WSBEiJ_T0034600.1 MGP_WSBEiJ_G0019297.1 mouse_genomes_project 12 85194952 85212829 - MGP_WSBEiJ_P0034600 Rps6kl1 protein_coding protein_coding MGP_WSBEiJ_T0034997.1 MGP_WSBEiJ_G0019426.1 mouse_genomes_project 12 106173721 106181907 + MGP_WSBEiJ_P0034997 Glrx5 protein_coding protein_coding MGP_WSBEiJ_T0033764.1 MGP_WSBEiJ_G0019002.1 mouse_genomes_project 12 27264941 27670380 + MGP_WSBEiJ_P0033764 Myt1l protein_coding protein_coding MGP_WSBEiJ_T0033765.1 MGP_WSBEiJ_G0019002.1 mouse_genomes_project 12 27271448 27670380 + MGP_WSBEiJ_P0033765 Myt1l protein_coding protein_coding MGP_WSBEiJ_T0012532.1 MGP_WSBEiJ_G0010662.1 mouse_genomes_project 12 56342655 56344239 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034228.1 MGP_WSBEiJ_G0019171.1 mouse_genomes_project 12 71768001 71841223 + MGP_WSBEiJ_P0034228 Lrrc9 protein_coding protein_coding MGP_WSBEiJ_T0034229.1 MGP_WSBEiJ_G0019171.1 mouse_genomes_project 12 71768068 71826719 + MGP_WSBEiJ_P0034229 Lrrc9 protein_coding protein_coding MGP_WSBEiJ_T0034230.1 MGP_WSBEiJ_G0019171.1 mouse_genomes_project 12 71768084 71794864 + Lrrc9 protein_coding retained_intron MGP_WSBEiJ_T0034231.1 MGP_WSBEiJ_G0019171.1 mouse_genomes_project 12 71768170 71844992 + Lrrc9 protein_coding processed_transcript MGP_WSBEiJ_T0034232.1 MGP_WSBEiJ_G0019171.1 mouse_genomes_project 12 71768377 71781220 + Lrrc9 protein_coding retained_intron MGP_WSBEiJ_T0034233.1 MGP_WSBEiJ_G0019171.1 mouse_genomes_project 12 71768384 71801455 + Lrrc9 protein_coding retained_intron MGP_WSBEiJ_T0034234.1 MGP_WSBEiJ_G0019171.1 mouse_genomes_project 12 71768515 71848458 + MGP_WSBEiJ_P0034234 Lrrc9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034235.1 MGP_WSBEiJ_G0019171.1 mouse_genomes_project 12 71803318 71804910 + Lrrc9 protein_coding retained_intron MGP_WSBEiJ_T0098997.1 MGP_WSBEiJ_G0037660.1 mouse_genomes_project 12 65616322 65616441 - Gm23826 snoRNA snoRNA MGP_WSBEiJ_T0034488.1 MGP_WSBEiJ_G0019261.1 mouse_genomes_project 12 83682535 83711568 + MGP_WSBEiJ_P0034488 Papln protein_coding protein_coding MGP_WSBEiJ_T0034489.1 MGP_WSBEiJ_G0019261.1 mouse_genomes_project 12 83682555 83711541 + MGP_WSBEiJ_P0034489 Papln protein_coding protein_coding MGP_WSBEiJ_T0034490.1 MGP_WSBEiJ_G0019261.1 mouse_genomes_project 12 83682563 83699789 + Papln protein_coding retained_intron MGP_WSBEiJ_T0033648.1 MGP_WSBEiJ_G0018961.1 mouse_genomes_project 12 11421202 11425634 - MGP_WSBEiJ_P0033648 Fam84a protein_coding protein_coding MGP_WSBEiJ_T0006306.1 MGP_WSBEiJ_G0005258.1 mouse_genomes_project 12 24795825 24815293 - Gm9866 lincRNA lincRNA MGP_WSBEiJ_T0006307.1 MGP_WSBEiJ_G0005258.1 mouse_genomes_project 12 24795831 24815615 - Gm9866 lincRNA lincRNA MGP_WSBEiJ_T0006308.1 MGP_WSBEiJ_G0005258.1 mouse_genomes_project 12 24796915 24815428 - Gm9866 lincRNA lincRNA MGP_WSBEiJ_T0006309.1 MGP_WSBEiJ_G0005258.1 mouse_genomes_project 12 24800434 24815444 - Gm9866 lincRNA lincRNA MGP_WSBEiJ_T0034150.1 MGP_WSBEiJ_G0019147.1 mouse_genomes_project 12 68976664 69023066 - MGP_WSBEiJ_P0034150 Cdkl1 protein_coding protein_coding MGP_WSBEiJ_T0000237.1 MGP_WSBEiJ_G0000185.1 mouse_genomes_project 12 115715353 115715650 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034629.1 MGP_WSBEiJ_G0019310.1 mouse_genomes_project 12 85937405 85946559 - MGP_WSBEiJ_P0034629 0610007P14Rik protein_coding protein_coding MGP_WSBEiJ_T0034630.1 MGP_WSBEiJ_G0019310.1 mouse_genomes_project 12 85937616 85946549 - 0610007P14Rik protein_coding processed_transcript MGP_WSBEiJ_T0034631.1 MGP_WSBEiJ_G0019310.1 mouse_genomes_project 12 85941133 85946581 - 0610007P14Rik protein_coding retained_intron MGP_WSBEiJ_T0034632.1 MGP_WSBEiJ_G0019310.1 mouse_genomes_project 12 85941368 85944287 - 0610007P14Rik protein_coding retained_intron MGP_WSBEiJ_T0034633.1 MGP_WSBEiJ_G0019310.1 mouse_genomes_project 12 85941575 85946587 - MGP_WSBEiJ_P0034633 0610007P14Rik protein_coding protein_coding MGP_WSBEiJ_T0034950.1 MGP_WSBEiJ_G0019398.1 mouse_genomes_project 12 104548442 104559081 - MGP_WSBEiJ_P0034950 Serpina10 protein_coding protein_coding MGP_WSBEiJ_T0034951.1 MGP_WSBEiJ_G0019398.1 mouse_genomes_project 12 104550277 104559058 - MGP_WSBEiJ_P0034951 Serpina10 protein_coding protein_coding MGP_WSBEiJ_T0034724.1 MGP_WSBEiJ_G0019334.1 mouse_genomes_project 12 87711513 87717536 + MGP_WSBEiJ_P0034724 Slirp protein_coding protein_coding MGP_WSBEiJ_T0034725.1 MGP_WSBEiJ_G0019334.1 mouse_genomes_project 12 87711531 87717494 + MGP_WSBEiJ_P0034725 Slirp protein_coding protein_coding MGP_WSBEiJ_T0034726.1 MGP_WSBEiJ_G0019334.1 mouse_genomes_project 12 87711537 87717520 + MGP_WSBEiJ_P0034726 Slirp protein_coding protein_coding MGP_WSBEiJ_T0006298.1 MGP_WSBEiJ_G0005250.1 mouse_genomes_project 12 5853410 5862236 - Gm4755 lincRNA lincRNA MGP_WSBEiJ_T0035040.1 MGP_WSBEiJ_G0019440.1 mouse_genomes_project 12 109294205 109394420 - MGP_WSBEiJ_P0035040 Bcl11b protein_coding protein_coding MGP_WSBEiJ_T0035041.1 MGP_WSBEiJ_G0019440.1 mouse_genomes_project 12 109300515 109394232 - MGP_WSBEiJ_P0035041 Bcl11b protein_coding protein_coding MGP_WSBEiJ_T0035042.1 MGP_WSBEiJ_G0019440.1 mouse_genomes_project 12 109300515 109394232 - MGP_WSBEiJ_P0035042 Bcl11b protein_coding protein_coding MGP_WSBEiJ_T0035014.1 MGP_WSBEiJ_G0019434.1 mouse_genomes_project 12 106828555 106898332 - MGP_WSBEiJ_P0035014 Atg2b protein_coding protein_coding MGP_WSBEiJ_T0035015.1 MGP_WSBEiJ_G0019434.1 mouse_genomes_project 12 106828560 106898353 - MGP_WSBEiJ_P0035015 Atg2b protein_coding unknown_likely_coding MGP_WSBEiJ_T0034963.1 MGP_WSBEiJ_G0019405.1 mouse_genomes_project 12 104662482 104675532 - MGP_WSBEiJ_P0034963 protein_coding protein_coding MGP_WSBEiJ_T0034964.1 MGP_WSBEiJ_G0019405.1 mouse_genomes_project 12 104662482 104673123 - MGP_WSBEiJ_P0034964 protein_coding protein_coding MGP_WSBEiJ_T0034965.1 MGP_WSBEiJ_G0019405.1 mouse_genomes_project 12 104662482 104717077 - MGP_WSBEiJ_P0034965 protein_coding protein_coding MGP_WSBEiJ_T0035010.1 MGP_WSBEiJ_G0019432.1 mouse_genomes_project 12 106774981 106808076 + MGP_WSBEiJ_P0035010 Bdkrb2 protein_coding protein_coding MGP_WSBEiJ_T0034806.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 99843618 100049149 - MGP_WSBEiJ_P0034806 Foxn3 protein_coding protein_coding MGP_WSBEiJ_T0034807.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 99843733 100048424 - MGP_WSBEiJ_P0034807 Foxn3 protein_coding protein_coding MGP_WSBEiJ_T0034808.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 99843733 100110552 - MGP_WSBEiJ_P0034808 Foxn3 protein_coding protein_coding MGP_WSBEiJ_T0034809.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 99845433 99942948 - MGP_WSBEiJ_P0034809 Foxn3 protein_coding protein_coding MGP_WSBEiJ_T0034810.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 99858220 99942947 - MGP_WSBEiJ_P0034810 Foxn3 protein_coding protein_coding MGP_WSBEiJ_T0034811.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 99942933 100011882 - Foxn3 protein_coding processed_transcript MGP_WSBEiJ_T0034812.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 99995513 100068782 - MGP_WSBEiJ_P0034812 Foxn3 protein_coding protein_coding MGP_WSBEiJ_T0034813.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 100042758 100110575 - Foxn3 protein_coding retained_intron MGP_WSBEiJ_T0034814.1 MGP_WSBEiJ_G0019354.1 mouse_genomes_project 12 100043790 100110589 - MGP_WSBEiJ_P0034814 Foxn3 protein_coding protein_coding MGP_WSBEiJ_T0100004.1 MGP_WSBEiJ_G0038647.1 mouse_genomes_project 12 101912578 101916243 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100005.1 MGP_WSBEiJ_G0038647.1 mouse_genomes_project 12 101916071 101916723 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0033965.1 MGP_WSBEiJ_G0019072.1 mouse_genomes_project 12 50064965 50153079 - MGP_WSBEiJ_P0033965 Strn3 protein_coding protein_coding MGP_WSBEiJ_T0033966.1 MGP_WSBEiJ_G0019072.1 mouse_genomes_project 12 50064965 50153079 - MGP_WSBEiJ_P0033966 Strn3 protein_coding protein_coding MGP_WSBEiJ_T0012528.1 MGP_WSBEiJ_G0010658.1 mouse_genomes_project 12 50213797 50214108 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034239.1 MGP_WSBEiJ_G0019175.1 mouse_genomes_project 12 72100208 72137891 + MGP_WSBEiJ_P0034239 Ppm1a protein_coding protein_coding MGP_WSBEiJ_T0000839.1 MGP_WSBEiJ_G0000778.1 mouse_genomes_project 12 111130027 111139406 + TEC TEC MGP_WSBEiJ_T0000121.1 MGP_WSBEiJ_G0000091.1 mouse_genomes_project 12 117659815 117660248 - MGP_WSBEiJ_P0000121 Ighv1-67 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000122.1 MGP_WSBEiJ_G0000091.1 mouse_genomes_project 12 117659815 117660109 - MGP_WSBEiJ_P0000122 Ighv1-67 IG_V_gene IG_V_gene MGP_WSBEiJ_T0006411.1 MGP_WSBEiJ_G0005325.1 mouse_genomes_project 12 113003543 113007611 - Gm10425 lincRNA lincRNA MGP_WSBEiJ_T0033842.1 MGP_WSBEiJ_G0019026.1 mouse_genomes_project 12 30882253 30948689 - MGP_WSBEiJ_P0033842 Cdhr3 protein_coding protein_coding MGP_WSBEiJ_T0033490.1 MGP_WSBEiJ_G0018910.1 mouse_genomes_project 12 43308 112955 - MGP_WSBEiJ_P0033490 Rab10 protein_coding protein_coding MGP_WSBEiJ_T0034833.1 MGP_WSBEiJ_G0019361.1 mouse_genomes_project 12 101023050 101250446 - MGP_WSBEiJ_P0034833 Ttc7b protein_coding protein_coding MGP_WSBEiJ_T0034834.1 MGP_WSBEiJ_G0019361.1 mouse_genomes_project 12 101023828 101142888 - MGP_WSBEiJ_P0034834 Ttc7b protein_coding unknown_likely_coding MGP_WSBEiJ_T0012539.1 MGP_WSBEiJ_G0010669.1 mouse_genomes_project 12 62002715 62003012 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034163.1 MGP_WSBEiJ_G0019151.1 mouse_genomes_project 12 69207478 69236594 - MGP_WSBEiJ_P0034163 Sav1 protein_coding protein_coding MGP_WSBEiJ_T0003341.1 MGP_WSBEiJ_G0003072.1 mouse_genomes_project 12 84970834 84971924 + Gm17139 antisense antisense MGP_WSBEiJ_T0034388.1 MGP_WSBEiJ_G0019238.1 mouse_genomes_project 12 80440765 80472238 + MGP_WSBEiJ_P0034388 Plekhd1 protein_coding protein_coding MGP_WSBEiJ_T0034389.1 MGP_WSBEiJ_G0019238.1 mouse_genomes_project 12 80454879 80468710 + Plekhd1 protein_coding processed_transcript MGP_WSBEiJ_T0034390.1 MGP_WSBEiJ_G0019238.1 mouse_genomes_project 12 80468782 80470031 + MGP_WSBEiJ_P0034390 Plekhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034391.1 MGP_WSBEiJ_G0019238.1 mouse_genomes_project 12 80469755 80470934 + Plekhd1 protein_coding retained_intron MGP_WSBEiJ_T0034272.1 MGP_WSBEiJ_G0019188.1 mouse_genomes_project 12 73407734 73682693 + MGP_WSBEiJ_P0034272 Syt16 protein_coding protein_coding MGP_WSBEiJ_T0034273.1 MGP_WSBEiJ_G0019188.1 mouse_genomes_project 12 73573533 73686903 + MGP_WSBEiJ_P0034273 Syt16 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000105.1 MGP_WSBEiJ_G0000081.1 mouse_genomes_project 12 116560181 116560615 - MGP_WSBEiJ_P0000105 Ighv1-15 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034027.1 MGP_WSBEiJ_G0019103.1 mouse_genomes_project 12 55364673 55366563 - MGP_WSBEiJ_P0034027 Nkx2-9 protein_coding protein_coding MGP_WSBEiJ_T0009730.1 MGP_WSBEiJ_G0007887.1 mouse_genomes_project 12 111197237 111197310 + Mir485 miRNA miRNA MGP_WSBEiJ_T0000230.1 MGP_WSBEiJ_G0000178.1 mouse_genomes_project 12 115467818 115468635 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034357.1 MGP_WSBEiJ_G0019222.1 mouse_genomes_project 12 78578889 78640522 - MGP_WSBEiJ_P0034357 protein_coding protein_coding MGP_WSBEiJ_T0034358.1 MGP_WSBEiJ_G0019222.1 mouse_genomes_project 12 78590115 78612326 - protein_coding processed_transcript MGP_WSBEiJ_T0034359.1 MGP_WSBEiJ_G0019222.1 mouse_genomes_project 12 78594608 78639908 - protein_coding processed_transcript MGP_WSBEiJ_T0033955.1 MGP_WSBEiJ_G0019067.1 mouse_genomes_project 12 48747220 49063306 - MGP_WSBEiJ_P0033955 Prkd1 protein_coding protein_coding MGP_WSBEiJ_T0003332.1 MGP_WSBEiJ_G0003063.1 mouse_genomes_project 12 73640939 73653079 - Gm29587 antisense antisense MGP_WSBEiJ_T0035319.1 MGP_WSBEiJ_G0019533.1 mouse_genomes_project 12 122130449 122206993 + MGP_WSBEiJ_P0035319 Tmem196 protein_coding protein_coding MGP_WSBEiJ_T0035320.1 MGP_WSBEiJ_G0019533.1 mouse_genomes_project 12 122130901 122206595 + MGP_WSBEiJ_P0035320 Tmem196 protein_coding protein_coding MGP_WSBEiJ_T0035321.1 MGP_WSBEiJ_G0019533.1 mouse_genomes_project 12 122130915 122202667 + MGP_WSBEiJ_P0035321 Tmem196 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035322.1 MGP_WSBEiJ_G0019533.1 mouse_genomes_project 12 122131049 122206488 + MGP_WSBEiJ_P0035322 Tmem196 protein_coding protein_coding MGP_WSBEiJ_T0035323.1 MGP_WSBEiJ_G0019533.1 mouse_genomes_project 12 122131061 122206836 + MGP_WSBEiJ_P0035323 Tmem196 protein_coding protein_coding MGP_WSBEiJ_T0012534.1 MGP_WSBEiJ_G0010664.1 mouse_genomes_project 12 57914936 57933794 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034271.1 MGP_WSBEiJ_G0019187.1 mouse_genomes_project 12 73373213 73394844 + MGP_WSBEiJ_P0034271 Snapc1 protein_coding protein_coding MGP_WSBEiJ_T0034186.1 MGP_WSBEiJ_G0019157.1 mouse_genomes_project 12 70097423 70176316 + MGP_WSBEiJ_P0034186 Frmd6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034187.1 MGP_WSBEiJ_G0019157.1 mouse_genomes_project 12 70097484 70175742 + MGP_WSBEiJ_P0034187 Frmd6 protein_coding protein_coding MGP_WSBEiJ_T0033633.1 MGP_WSBEiJ_G0018950.1 mouse_genomes_project 12 7548127 7552882 + MGP_WSBEiJ_P0033633 Rdh14 protein_coding protein_coding MGP_WSBEiJ_T0034247.1 MGP_WSBEiJ_G0019177.1 mouse_genomes_project 12 72290790 72295798 + MGP_WSBEiJ_P0034247 Six6 protein_coding protein_coding MGP_WSBEiJ_T0100506.1 MGP_WSBEiJ_G0038965.1 mouse_genomes_project 12 47317238 47319451 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006380.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110990635 110996426 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006381.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110990639 111026554 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006382.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110990641 111014021 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006383.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110991657 111016514 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006384.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110991902 110995421 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006386.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110995611 111013152 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006387.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110996426 111026559 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006388.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110997317 111026552 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006389.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 110997371 111026555 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006390.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 111002221 111013635 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0006391.1 MGP_WSBEiJ_G0005316.1 mouse_genomes_project 12 111002278 111002799 + Meg3 lincRNA lincRNA MGP_WSBEiJ_T0034204.1 MGP_WSBEiJ_G0019163.1 mouse_genomes_project 12 70424210 70524474 + MGP_WSBEiJ_P0034204 2700049A03Rik protein_coding protein_coding MGP_WSBEiJ_T0034205.1 MGP_WSBEiJ_G0019163.1 mouse_genomes_project 12 70424210 70524474 + MGP_WSBEiJ_P0034205 2700049A03Rik protein_coding protein_coding MGP_WSBEiJ_T0034206.1 MGP_WSBEiJ_G0019163.1 mouse_genomes_project 12 70438369 70442851 + MGP_WSBEiJ_P0034206 2700049A03Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034207.1 MGP_WSBEiJ_G0019163.1 mouse_genomes_project 12 70458535 70524470 + MGP_WSBEiJ_P0034207 2700049A03Rik protein_coding protein_coding MGP_WSBEiJ_T0000028.1 MGP_WSBEiJ_G0000022.1 mouse_genomes_project 12 115260552 115260569 - MGP_WSBEiJ_P0000028 IG_D_gene IG_D_gene MGP_WSBEiJ_T0009670.1 MGP_WSBEiJ_G0007827.1 mouse_genomes_project 12 103888261 103888396 + Gm44324 miRNA miRNA MGP_WSBEiJ_T0097491.1 MGP_WSBEiJ_G0036158.1 mouse_genomes_project 12 72296729 72316667 + Gm26709 sense_overlapping sense_overlapping MGP_WSBEiJ_T0000069.1 MGP_WSBEiJ_G0000056.1 mouse_genomes_project 12 115709222 115709668 - MGP_WSBEiJ_P0000069 Ighv2-9 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033783.1 MGP_WSBEiJ_G0019007.1 mouse_genomes_project 12 28656733 28666393 + MGP_WSBEiJ_P0033783 Fam150b protein_coding protein_coding MGP_WSBEiJ_T0035148.1 MGP_WSBEiJ_G0019475.1 mouse_genomes_project 12 112994277 113007851 + MGP_WSBEiJ_P0035148 Exoc3l4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096770.1 MGP_WSBEiJ_G0035451.1 mouse_genomes_project 12 54539815 54540785 + pseudogene pseudogene MGP_WSBEiJ_T0003301.1 MGP_WSBEiJ_G0003045.1 mouse_genomes_project 12 31382 37289 + Rab10os antisense antisense MGP_WSBEiJ_T0003302.1 MGP_WSBEiJ_G0003045.1 mouse_genomes_project 12 31404 34152 + Rab10os antisense antisense MGP_WSBEiJ_T0003303.1 MGP_WSBEiJ_G0003045.1 mouse_genomes_project 12 31404 46256 + Rab10os antisense antisense MGP_WSBEiJ_T0003304.1 MGP_WSBEiJ_G0003045.1 mouse_genomes_project 12 31669 46255 + Rab10os antisense antisense MGP_WSBEiJ_T0003305.1 MGP_WSBEiJ_G0003045.1 mouse_genomes_project 12 31710 35113 + Rab10os antisense antisense MGP_WSBEiJ_T0003306.1 MGP_WSBEiJ_G0003045.1 mouse_genomes_project 12 31793 45823 + Rab10os antisense antisense MGP_WSBEiJ_T0003307.1 MGP_WSBEiJ_G0003045.1 mouse_genomes_project 12 32489 45878 + Rab10os antisense antisense MGP_WSBEiJ_T0009671.1 MGP_WSBEiJ_G0007828.1 mouse_genomes_project 12 106172108 106172173 - Mir3069 miRNA miRNA MGP_WSBEiJ_T0009701.1 MGP_WSBEiJ_G0007858.1 mouse_genomes_project 12 111172966 111173015 - Mir299b miRNA miRNA MGP_WSBEiJ_T0000123.1 MGP_WSBEiJ_G0000092.1 mouse_genomes_project 12 118083421 118083855 - MGP_WSBEiJ_P0000123 IG_V_gene IG_V_gene MGP_WSBEiJ_T0003353.1 MGP_WSBEiJ_G0003082.1 mouse_genomes_project 12 110501788 110502257 + Gm28498 antisense antisense MGP_WSBEiJ_T0006299.1 MGP_WSBEiJ_G0005251.1 mouse_genomes_project 12 5968115 5972397 - 9930038B18Rik lincRNA lincRNA MGP_WSBEiJ_T0009634.1 MGP_WSBEiJ_G0007791.1 mouse_genomes_project 12 24016563 24016673 - Mir6538 miRNA miRNA MGP_WSBEiJ_T0034466.1 MGP_WSBEiJ_G0019257.1 mouse_genomes_project 12 83418046 83444777 + MGP_WSBEiJ_P0034466 Dcaf4 protein_coding protein_coding MGP_WSBEiJ_T0000248.1 MGP_WSBEiJ_G0000196.1 mouse_genomes_project 12 116456334 116456633 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034562.1 MGP_WSBEiJ_G0019284.1 mouse_genomes_project 12 84590168 84616837 + MGP_WSBEiJ_P0034562 Vsx2 protein_coding protein_coding MGP_WSBEiJ_T0034563.1 MGP_WSBEiJ_G0019284.1 mouse_genomes_project 12 84590246 84616837 + MGP_WSBEiJ_P0034563 Vsx2 protein_coding protein_coding MGP_WSBEiJ_T0033948.1 MGP_WSBEiJ_G0019063.1 mouse_genomes_project 12 44980945 45112560 - MGP_WSBEiJ_P0033948 Nova1 protein_coding protein_coding MGP_WSBEiJ_T0000102.1 MGP_WSBEiJ_G0000079.1 mouse_genomes_project 12 116522062 116522495 - MGP_WSBEiJ_P0000102 Ighv1-11 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034344.1 MGP_WSBEiJ_G0019213.1 mouse_genomes_project 12 76485147 76510168 - MGP_WSBEiJ_P0034344 Max protein_coding unknown_likely_coding MGP_WSBEiJ_T0033638.1 MGP_WSBEiJ_G0018954.1 mouse_genomes_project 12 8432272 8490501 + MGP_WSBEiJ_P0033638 Smc6 protein_coding protein_coding MGP_WSBEiJ_T0098976.1 MGP_WSBEiJ_G0037639.1 mouse_genomes_project 12 31321337 31321469 - Gm23529 snoRNA snoRNA MGP_WSBEiJ_T0000832.1 MGP_WSBEiJ_G0000771.1 mouse_genomes_project 12 82986967 82987769 - TEC TEC MGP_WSBEiJ_T0000094.1 MGP_WSBEiJ_G0000073.1 mouse_genomes_project 12 116351318 116351776 - MGP_WSBEiJ_P0000094 Ighv6-7 IG_V_gene IG_V_gene MGP_WSBEiJ_T0009638.1 MGP_WSBEiJ_G0007795.1 mouse_genomes_project 12 30915696 30915847 + Gm22904 miRNA miRNA MGP_WSBEiJ_T0034428.1 MGP_WSBEiJ_G0019248.1 mouse_genomes_project 12 81354577 81366229 - MGP_WSBEiJ_P0034428 Adam21 protein_coding protein_coding MGP_WSBEiJ_T0003321.1 MGP_WSBEiJ_G0003056.1 mouse_genomes_project 12 55285031 55319563 + Gm26973 antisense antisense MGP_WSBEiJ_T0003322.1 MGP_WSBEiJ_G0003056.1 mouse_genomes_project 12 55285082 55360808 + Gm26973 antisense antisense MGP_WSBEiJ_T0003323.1 MGP_WSBEiJ_G0003056.1 mouse_genomes_project 12 55287196 55360771 + Gm26973 antisense antisense MGP_WSBEiJ_T0035185.1 MGP_WSBEiJ_G0019485.1 mouse_genomes_project 12 113408407 113417322 - MGP_WSBEiJ_P0035185 Xrcc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035186.1 MGP_WSBEiJ_G0019485.1 mouse_genomes_project 12 113408408 113418947 - MGP_WSBEiJ_P0035186 Xrcc3 protein_coding protein_coding MGP_WSBEiJ_T0035187.1 MGP_WSBEiJ_G0019485.1 mouse_genomes_project 12 113410062 113417322 - Xrcc3 protein_coding processed_transcript MGP_WSBEiJ_T0035188.1 MGP_WSBEiJ_G0019485.1 mouse_genomes_project 12 113410128 113415120 - Xrcc3 protein_coding retained_intron MGP_WSBEiJ_T0035189.1 MGP_WSBEiJ_G0019485.1 mouse_genomes_project 12 113410223 113418979 - Xrcc3 protein_coding processed_transcript MGP_WSBEiJ_T0035191.1 MGP_WSBEiJ_G0019485.1 mouse_genomes_project 12 113414903 113417342 - Xrcc3 protein_coding processed_transcript MGP_WSBEiJ_T0035192.1 MGP_WSBEiJ_G0019485.1 mouse_genomes_project 12 113415038 113418958 - Xrcc3 protein_coding processed_transcript MGP_WSBEiJ_T0035193.1 MGP_WSBEiJ_G0019485.1 mouse_genomes_project 12 113416649 113417342 - Xrcc3 protein_coding processed_transcript MGP_WSBEiJ_T0033753.1 MGP_WSBEiJ_G0018995.1 mouse_genomes_project 12 26249894 26273122 - MGP_WSBEiJ_P0033753 Allc protein_coding unknown_likely_coding MGP_WSBEiJ_T0034904.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 103891069 104093009 + MGP_WSBEiJ_P0034904 Unc79 protein_coding protein_coding MGP_WSBEiJ_T0034905.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 103891787 104093009 + MGP_WSBEiJ_P0034905 Unc79 protein_coding protein_coding MGP_WSBEiJ_T0034906.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 103902665 103907060 + Unc79 protein_coding retained_intron MGP_WSBEiJ_T0034907.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 103903436 103965555 + MGP_WSBEiJ_P0034907 Unc79 protein_coding protein_coding MGP_WSBEiJ_T0034908.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 103903487 104093397 + MGP_WSBEiJ_P0034908 Unc79 protein_coding protein_coding MGP_WSBEiJ_T0034909.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 103903544 104093464 + MGP_WSBEiJ_P0034909 Unc79 protein_coding protein_coding MGP_WSBEiJ_T0034910.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 103965205 103976783 + Unc79 protein_coding retained_intron MGP_WSBEiJ_T0034911.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 104000746 104018028 + MGP_WSBEiJ_P0034911 Unc79 protein_coding protein_coding MGP_WSBEiJ_T0034912.1 MGP_WSBEiJ_G0019387.1 mouse_genomes_project 12 104041878 104054466 + MGP_WSBEiJ_P0034912 Unc79 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034617.1 MGP_WSBEiJ_G0019303.1 mouse_genomes_project 12 85377851 85423499 - MGP_WSBEiJ_P0034617 Nek9 protein_coding protein_coding MGP_WSBEiJ_T0003330.1 MGP_WSBEiJ_G0003062.1 mouse_genomes_project 12 70274510 70301297 - 3110056K07Rik antisense antisense MGP_WSBEiJ_T0003331.1 MGP_WSBEiJ_G0003062.1 mouse_genomes_project 12 70295488 70301533 - 3110056K07Rik antisense antisense MGP_WSBEiJ_T0034309.1 MGP_WSBEiJ_G0019201.1 mouse_genomes_project 12 75842332 75851568 + MGP_WSBEiJ_P0034309 Akap5 protein_coding protein_coding MGP_WSBEiJ_T0034310.1 MGP_WSBEiJ_G0019201.1 mouse_genomes_project 12 75842332 75851570 + MGP_WSBEiJ_P0034310 Akap5 protein_coding protein_coding MGP_WSBEiJ_T0034311.1 MGP_WSBEiJ_G0019201.1 mouse_genomes_project 12 75842346 75847425 + MGP_WSBEiJ_P0034311 Akap5 protein_coding protein_coding MGP_WSBEiJ_T0011130.1 MGP_WSBEiJ_G0009287.1 mouse_genomes_project 12 54998006 54998291 - Gm24685 misc_RNA misc_RNA MGP_WSBEiJ_T0034148.1 MGP_WSBEiJ_G0019145.1 mouse_genomes_project 12 68911935 68944982 - MGP_WSBEiJ_P0034148 L2hgdh protein_coding protein_coding MGP_WSBEiJ_T0034383.1 MGP_WSBEiJ_G0019234.1 mouse_genomes_project 12 80196421 80234876 + MGP_WSBEiJ_P0034383 Exd2 protein_coding protein_coding MGP_WSBEiJ_T0034653.1 MGP_WSBEiJ_G0019312.1 mouse_genomes_project 12 86183923 86208160 - MGP_WSBEiJ_P0034653 Tgfb3 protein_coding protein_coding MGP_WSBEiJ_T0009633.1 MGP_WSBEiJ_G0007790.1 mouse_genomes_project 12 14744999 14745082 + Mir3066 miRNA miRNA MGP_WSBEiJ_T0034065.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58007526 58068967 + MGP_WSBEiJ_P0034065 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034066.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58007552 58068964 + MGP_WSBEiJ_P0034066 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034067.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58007569 58068967 + MGP_WSBEiJ_P0034067 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034068.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58007571 58027995 + MGP_WSBEiJ_P0034068 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034069.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58007591 58069013 + MGP_WSBEiJ_P0034069 Ctage5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034070.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58007616 58047397 + MGP_WSBEiJ_P0034070 Ctage5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034071.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58008829 58025327 + MGP_WSBEiJ_P0034071 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034072.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58009093 58070370 + MGP_WSBEiJ_P0034072 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034073.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58009260 58068964 + MGP_WSBEiJ_P0034073 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034074.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58009288 58023430 + Ctage5 protein_coding retained_intron MGP_WSBEiJ_T0034075.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58009294 58068972 + MGP_WSBEiJ_P0034075 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034076.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58009309 58069013 + MGP_WSBEiJ_P0034076 Ctage5 protein_coding protein_coding MGP_WSBEiJ_T0034077.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58013911 58068743 + MGP_WSBEiJ_P0034077 Ctage5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034078.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58027967 58068743 + MGP_WSBEiJ_P0034078 Ctage5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034079.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58041340 58063262 + MGP_WSBEiJ_P0034079 Ctage5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034080.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58045240 58053912 + Ctage5 protein_coding retained_intron MGP_WSBEiJ_T0034081.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58047310 58068431 + Ctage5 protein_coding retained_intron MGP_WSBEiJ_T0034082.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58047439 58049505 + Ctage5 protein_coding retained_intron MGP_WSBEiJ_T0034083.1 MGP_WSBEiJ_G0019117.1 mouse_genomes_project 12 58058477 58067310 + Ctage5 protein_coding retained_intron MGP_WSBEiJ_T0034126.1 MGP_WSBEiJ_G0019135.1 mouse_genomes_project 12 68369797 68379942 - MGP_WSBEiJ_P0034126 Dnaaf2 protein_coding protein_coding MGP_WSBEiJ_T0034853.1 MGP_WSBEiJ_G0019366.1 mouse_genomes_project 12 101809535 101857002 - MGP_WSBEiJ_P0034853 Smek1 protein_coding protein_coding MGP_WSBEiJ_T0034854.1 MGP_WSBEiJ_G0019366.1 mouse_genomes_project 12 101809535 101857002 - MGP_WSBEiJ_P0034854 Smek1 protein_coding protein_coding MGP_WSBEiJ_T0009678.1 MGP_WSBEiJ_G0007835.1 mouse_genomes_project 12 111026822 111026913 + Mir673 miRNA miRNA MGP_WSBEiJ_T0099001.1 MGP_WSBEiJ_G0037664.1 mouse_genomes_project 12 82618862 82618999 - Gm22149 snoRNA snoRNA MGP_WSBEiJ_T0000060.1 MGP_WSBEiJ_G0000049.1 mouse_genomes_project 12 115590663 115591121 - MGP_WSBEiJ_P0000060 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000061.1 MGP_WSBEiJ_G0000049.1 mouse_genomes_project 12 115590663 115591181 - MGP_WSBEiJ_P0000061 IG_V_gene IG_V_gene MGP_WSBEiJ_T0035097.1 MGP_WSBEiJ_G0019458.1 mouse_genomes_project 12 111947579 112073353 + MGP_WSBEiJ_P0035097 Ppp2r5c protein_coding unknown_likely_coding MGP_WSBEiJ_T0035098.1 MGP_WSBEiJ_G0019458.1 mouse_genomes_project 12 111986218 112084722 + MGP_WSBEiJ_P0035098 Ppp2r5c protein_coding protein_coding MGP_WSBEiJ_T0035099.1 MGP_WSBEiJ_G0019458.1 mouse_genomes_project 12 111986218 112084722 + MGP_WSBEiJ_P0035099 Ppp2r5c protein_coding protein_coding MGP_WSBEiJ_T0035053.1 MGP_WSBEiJ_G0019445.1 mouse_genomes_project 12 109749418 109779791 + MGP_WSBEiJ_P0035053 Cyp46a1 protein_coding protein_coding MGP_WSBEiJ_T0035242.1 MGP_WSBEiJ_G0019507.1 mouse_genomes_project 12 114576616 114596917 - MGP_WSBEiJ_P0035242 Jag2 protein_coding protein_coding MGP_WSBEiJ_T0034405.1 MGP_WSBEiJ_G0019244.1 mouse_genomes_project 12 80975117 81119752 - MGP_WSBEiJ_P0034405 Slc8a3 protein_coding protein_coding MGP_WSBEiJ_T0034406.1 MGP_WSBEiJ_G0019244.1 mouse_genomes_project 12 80975478 81119547 - MGP_WSBEiJ_P0034406 Slc8a3 protein_coding protein_coding MGP_WSBEiJ_T0034407.1 MGP_WSBEiJ_G0019244.1 mouse_genomes_project 12 80976654 81119768 - MGP_WSBEiJ_P0034407 Slc8a3 protein_coding protein_coding MGP_WSBEiJ_T0034408.1 MGP_WSBEiJ_G0019244.1 mouse_genomes_project 12 80979607 81079132 - MGP_WSBEiJ_P0034408 Slc8a3 protein_coding protein_coding MGP_WSBEiJ_T0034409.1 MGP_WSBEiJ_G0019244.1 mouse_genomes_project 12 80991226 81119768 - Slc8a3 protein_coding retained_intron MGP_WSBEiJ_T0100515.1 MGP_WSBEiJ_G0038973.1 mouse_genomes_project 12 104724705 104734372 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000227.1 MGP_WSBEiJ_G0000175.1 mouse_genomes_project 12 115467730 115468680 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034401.1 MGP_WSBEiJ_G0019242.1 mouse_genomes_project 12 80714428 80729436 - MGP_WSBEiJ_P0034401 Slc10a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034956.1 MGP_WSBEiJ_G0019401.1 mouse_genomes_project 12 104621243 104627856 - MGP_WSBEiJ_P0034956 Serpina1f protein_coding protein_coding MGP_WSBEiJ_T0034957.1 MGP_WSBEiJ_G0019401.1 mouse_genomes_project 12 104622833 104628864 - MGP_WSBEiJ_P0034957 Serpina1f protein_coding protein_coding MGP_WSBEiJ_T0034958.1 MGP_WSBEiJ_G0019401.1 mouse_genomes_project 12 104622836 104627906 - MGP_WSBEiJ_P0034958 Serpina1f protein_coding protein_coding MGP_WSBEiJ_T0033963.1 MGP_WSBEiJ_G0019071.1 mouse_genomes_project 12 50049792 50062186 + MGP_WSBEiJ_P0033963 Coch protein_coding protein_coding MGP_WSBEiJ_T0033964.1 MGP_WSBEiJ_G0019071.1 mouse_genomes_project 12 50049792 50062186 + MGP_WSBEiJ_P0033964 Coch protein_coding protein_coding MGP_WSBEiJ_T0034031.1 MGP_WSBEiJ_G0019105.1 mouse_genomes_project 12 55474236 55982625 - MGP_WSBEiJ_P0034031 Slc25a21 protein_coding protein_coding MGP_WSBEiJ_T0034032.1 MGP_WSBEiJ_G0019105.1 mouse_genomes_project 12 55475413 55941966 - MGP_WSBEiJ_P0034032 Slc25a21 protein_coding protein_coding MGP_WSBEiJ_T0034033.1 MGP_WSBEiJ_G0019105.1 mouse_genomes_project 12 55490619 55535636 - Slc25a21 protein_coding processed_transcript MGP_WSBEiJ_T0034034.1 MGP_WSBEiJ_G0019105.1 mouse_genomes_project 12 55533788 55752962 - Slc25a21 protein_coding retained_intron MGP_WSBEiJ_T0033859.1 MGP_WSBEiJ_G0019030.1 mouse_genomes_project 12 31839681 31841828 + MGP_WSBEiJ_P0033859 Twist1 protein_coding protein_coding MGP_WSBEiJ_T0035145.1 MGP_WSBEiJ_G0019473.1 mouse_genomes_project 12 112870724 112958034 - MGP_WSBEiJ_P0035145 Cdc42bpb protein_coding protein_coding MGP_WSBEiJ_T0035146.1 MGP_WSBEiJ_G0019473.1 mouse_genomes_project 12 112870730 112957867 - MGP_WSBEiJ_P0035146 Cdc42bpb protein_coding unknown_likely_coding MGP_WSBEiJ_T0000837.1 MGP_WSBEiJ_G0000776.1 mouse_genomes_project 12 103466271 103468460 - TEC TEC MGP_WSBEiJ_T0009630.1 MGP_WSBEiJ_G0007787.1 mouse_genomes_project 12 514839 514902 + Gm26050 miRNA miRNA MGP_WSBEiJ_T0033867.1 MGP_WSBEiJ_G0019036.1 mouse_genomes_project 12 33433056 33468926 - MGP_WSBEiJ_P0033867 Ahr protein_coding protein_coding MGP_WSBEiJ_T0033868.1 MGP_WSBEiJ_G0019036.1 mouse_genomes_project 12 33439939 33468509 - MGP_WSBEiJ_P0033868 Ahr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033869.1 MGP_WSBEiJ_G0019036.1 mouse_genomes_project 12 33449611 33460582 - Ahr protein_coding retained_intron MGP_WSBEiJ_T0009727.1 MGP_WSBEiJ_G0007884.1 mouse_genomes_project 12 111196106 111196182 + Mir382 miRNA miRNA MGP_WSBEiJ_T0034236.1 MGP_WSBEiJ_G0019172.1 mouse_genomes_project 12 71866768 71905446 + MGP_WSBEiJ_P0034236 Pcnx4 protein_coding protein_coding MGP_WSBEiJ_T0034318.1 MGP_WSBEiJ_G0019203.1 mouse_genomes_project 12 75893895 75923859 + MGP_WSBEiJ_P0034318 Zbtb1 protein_coding protein_coding MGP_WSBEiJ_T0034169.1 MGP_WSBEiJ_G0019153.1 mouse_genomes_project 12 69411895 69445915 + Abhd12b protein_coding retained_intron MGP_WSBEiJ_T0034170.1 MGP_WSBEiJ_G0019153.1 mouse_genomes_project 12 69411910 69446328 + MGP_WSBEiJ_P0034170 Abhd12b protein_coding protein_coding MGP_WSBEiJ_T0034171.1 MGP_WSBEiJ_G0019153.1 mouse_genomes_project 12 69411910 69446328 + MGP_WSBEiJ_P0034171 Abhd12b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034172.1 MGP_WSBEiJ_G0019153.1 mouse_genomes_project 12 69411910 69446328 + MGP_WSBEiJ_P0034172 Abhd12b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034173.1 MGP_WSBEiJ_G0019153.1 mouse_genomes_project 12 69411910 69446328 + MGP_WSBEiJ_P0034173 Abhd12b protein_coding protein_coding MGP_WSBEiJ_T0034174.1 MGP_WSBEiJ_G0019153.1 mouse_genomes_project 12 69444615 69445915 + Abhd12b protein_coding retained_intron MGP_WSBEiJ_T0034303.1 MGP_WSBEiJ_G0019198.1 mouse_genomes_project 12 75622502 75688293 - MGP_WSBEiJ_P0034303 Esr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034304.1 MGP_WSBEiJ_G0019198.1 mouse_genomes_project 12 75622502 75688293 - MGP_WSBEiJ_P0034304 Esr2 protein_coding protein_coding MGP_WSBEiJ_T0034305.1 MGP_WSBEiJ_G0019198.1 mouse_genomes_project 12 75622502 75677817 - MGP_WSBEiJ_P0034305 Esr2 protein_coding protein_coding MGP_WSBEiJ_T0034306.1 MGP_WSBEiJ_G0019198.1 mouse_genomes_project 12 75622522 75688293 - MGP_WSBEiJ_P0034306 Esr2 protein_coding protein_coding MGP_WSBEiJ_T0003327.1 MGP_WSBEiJ_G0003060.1 mouse_genomes_project 12 68455234 68462960 - Gm15561 antisense antisense MGP_WSBEiJ_T0033651.1 MGP_WSBEiJ_G0018963.1 mouse_genomes_project 12 13885930 13939575 - MGP_WSBEiJ_P0033651 Lpin1 protein_coding protein_coding MGP_WSBEiJ_T0033652.1 MGP_WSBEiJ_G0018963.1 mouse_genomes_project 12 13885930 13939575 - MGP_WSBEiJ_P0033652 Lpin1 protein_coding protein_coding MGP_WSBEiJ_T0100518.1 MGP_WSBEiJ_G0038976.1 mouse_genomes_project 12 104821928 104830648 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009654.1 MGP_WSBEiJ_G0007811.1 mouse_genomes_project 12 75402718 75402801 + Mir5101 miRNA miRNA MGP_WSBEiJ_T0012536.1 MGP_WSBEiJ_G0010666.1 mouse_genomes_project 12 60282606 60283579 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000266.1 MGP_WSBEiJ_G0000214.1 mouse_genomes_project 12 118083421 118083855 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0009643.1 MGP_WSBEiJ_G0007800.1 mouse_genomes_project 12 38364629 38364729 - Mir1938 miRNA miRNA MGP_WSBEiJ_T0034281.1 MGP_WSBEiJ_G0019193.1 mouse_genomes_project 12 74866026 74871094 - MGP_WSBEiJ_P0034281 Gphb5 protein_coding protein_coding MGP_WSBEiJ_T0099007.1 MGP_WSBEiJ_G0037670.1 mouse_genomes_project 12 103122157 103122372 - Gm25203 snoRNA snoRNA MGP_WSBEiJ_T0097763.1 MGP_WSBEiJ_G0036426.1 mouse_genomes_project 12 53578832 53578936 + Gm24296 snRNA snRNA MGP_WSBEiJ_T0097751.1 MGP_WSBEiJ_G0036414.1 mouse_genomes_project 12 10742393 10742500 - Gm24142 snRNA snRNA MGP_WSBEiJ_T0006319.1 MGP_WSBEiJ_G0005267.1 mouse_genomes_project 12 47756005 47773131 + 3110039M20Rik lincRNA lincRNA MGP_WSBEiJ_T0006320.1 MGP_WSBEiJ_G0005267.1 mouse_genomes_project 12 47757013 47772909 + 3110039M20Rik lincRNA lincRNA MGP_WSBEiJ_T0009660.1 MGP_WSBEiJ_G0007817.1 mouse_genomes_project 12 85832796 85832857 - miRNA miRNA MGP_WSBEiJ_T0034728.1 MGP_WSBEiJ_G0019336.1 mouse_genomes_project 12 88549147 88550575 - MGP_WSBEiJ_P0034728 Gm7104 protein_coding protein_coding MGP_WSBEiJ_T0034514.1 MGP_WSBEiJ_G0019272.1 mouse_genomes_project 12 84066448 84093785 + Dnal1 protein_coding processed_transcript MGP_WSBEiJ_T0034515.1 MGP_WSBEiJ_G0019272.1 mouse_genomes_project 12 84066448 84099064 + MGP_WSBEiJ_P0034515 Dnal1 protein_coding protein_coding MGP_WSBEiJ_T0034516.1 MGP_WSBEiJ_G0019272.1 mouse_genomes_project 12 84066453 84092404 + MGP_WSBEiJ_P0034516 Dnal1 protein_coding protein_coding MGP_WSBEiJ_T0034517.1 MGP_WSBEiJ_G0019272.1 mouse_genomes_project 12 84066472 84094551 + MGP_WSBEiJ_P0034517 Dnal1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034518.1 MGP_WSBEiJ_G0019272.1 mouse_genomes_project 12 84066473 84087897 + MGP_WSBEiJ_P0034518 Dnal1 protein_coding protein_coding MGP_WSBEiJ_T0034519.1 MGP_WSBEiJ_G0019272.1 mouse_genomes_project 12 84080712 84103010 + Dnal1 protein_coding retained_intron MGP_WSBEiJ_T0034520.1 MGP_WSBEiJ_G0019272.1 mouse_genomes_project 12 84089550 84091095 + MGP_WSBEiJ_P0034520 Dnal1 protein_coding protein_coding MGP_WSBEiJ_T0034348.1 MGP_WSBEiJ_G0019215.1 mouse_genomes_project 12 77182632 77183927 - MGP_WSBEiJ_P0034348 protein_coding protein_coding MGP_WSBEiJ_T0097783.1 MGP_WSBEiJ_G0036446.1 mouse_genomes_project 12 95935250 95935357 - Gm26055 snRNA snRNA MGP_WSBEiJ_T0033647.1 MGP_WSBEiJ_G0018960.1 mouse_genomes_project 12 10517977 10836655 + MGP_WSBEiJ_P0033647 Nbas protein_coding protein_coding MGP_WSBEiJ_T0033923.1 MGP_WSBEiJ_G0019054.1 mouse_genomes_project 12 38364675 38367158 + MGP_WSBEiJ_P0033923 Gm7008 protein_coding protein_coding MGP_WSBEiJ_T0033924.1 MGP_WSBEiJ_G0019054.1 mouse_genomes_project 12 38365281 38371106 + MGP_WSBEiJ_P0033924 Gm7008 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033925.1 MGP_WSBEiJ_G0019054.1 mouse_genomes_project 12 38365346 38371091 + MGP_WSBEiJ_P0033925 Gm7008 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034046.1 MGP_WSBEiJ_G0019108.1 mouse_genomes_project 12 56366432 56371921 - MGP_WSBEiJ_P0034046 Foxa1 protein_coding protein_coding MGP_WSBEiJ_T0034657.1 MGP_WSBEiJ_G0019315.1 mouse_genomes_project 12 86515124 86684906 + MGP_WSBEiJ_P0034657 Esrrb protein_coding protein_coding MGP_WSBEiJ_T0034658.1 MGP_WSBEiJ_G0019315.1 mouse_genomes_project 12 86576606 86684903 + MGP_WSBEiJ_P0034658 Esrrb protein_coding protein_coding MGP_WSBEiJ_T0034659.1 MGP_WSBEiJ_G0019315.1 mouse_genomes_project 12 86576606 86679032 + MGP_WSBEiJ_P0034659 Esrrb protein_coding protein_coding MGP_WSBEiJ_T0034660.1 MGP_WSBEiJ_G0019315.1 mouse_genomes_project 12 86576845 86683078 + MGP_WSBEiJ_P0034660 Esrrb protein_coding protein_coding MGP_WSBEiJ_T0034661.1 MGP_WSBEiJ_G0019315.1 mouse_genomes_project 12 86627265 86682343 + MGP_WSBEiJ_P0034661 Esrrb protein_coding protein_coding MGP_WSBEiJ_T0034662.1 MGP_WSBEiJ_G0019315.1 mouse_genomes_project 12 86667951 86673478 + Esrrb protein_coding processed_transcript MGP_WSBEiJ_T0034212.1 MGP_WSBEiJ_G0019167.1 mouse_genomes_project 12 71391619 71405976 - MGP_WSBEiJ_P0034212 L3hypdh protein_coding protein_coding MGP_WSBEiJ_T0034213.1 MGP_WSBEiJ_G0019167.1 mouse_genomes_project 12 71394685 71405976 - L3hypdh protein_coding retained_intron MGP_WSBEiJ_T0034214.1 MGP_WSBEiJ_G0019167.1 mouse_genomes_project 12 71395453 71405555 - L3hypdh protein_coding processed_transcript MGP_WSBEiJ_T0011125.1 MGP_WSBEiJ_G0009282.1 mouse_genomes_project 12 8854169 8854477 - Gm23781 misc_RNA misc_RNA MGP_WSBEiJ_T0034861.1 MGP_WSBEiJ_G0019370.1 mouse_genomes_project 12 102680587 102762298 - MGP_WSBEiJ_P0034861 Trip11 protein_coding protein_coding MGP_WSBEiJ_T0034862.1 MGP_WSBEiJ_G0019370.1 mouse_genomes_project 12 102684090 102741004 - MGP_WSBEiJ_P0034862 Trip11 protein_coding protein_coding MGP_WSBEiJ_T0034863.1 MGP_WSBEiJ_G0019370.1 mouse_genomes_project 12 102718244 102729254 - MGP_WSBEiJ_P0034863 Trip11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034864.1 MGP_WSBEiJ_G0019370.1 mouse_genomes_project 12 102731866 102762154 - MGP_WSBEiJ_P0034864 Trip11 protein_coding protein_coding MGP_WSBEiJ_T0034865.1 MGP_WSBEiJ_G0019370.1 mouse_genomes_project 12 102736433 102762171 - MGP_WSBEiJ_P0034865 Trip11 protein_coding protein_coding MGP_WSBEiJ_T0034866.1 MGP_WSBEiJ_G0019370.1 mouse_genomes_project 12 102761306 102762186 - Trip11 protein_coding processed_transcript MGP_WSBEiJ_T0016712.1 MGP_WSBEiJ_G0014652.1 mouse_genomes_project 12 99944267 99948352 - Gm20682 processed_transcript processed_transcript MGP_WSBEiJ_T0035215.1 MGP_WSBEiJ_G0019496.1 mouse_genomes_project 12 114236285 114264807 + MGP_WSBEiJ_P0035215 Inf2 protein_coding protein_coding MGP_WSBEiJ_T0034005.1 MGP_WSBEiJ_G0019092.1 mouse_genomes_project 12 53946000 53959328 + MGP_WSBEiJ_P0034005 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033892.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36858239 36947815 + MGP_WSBEiJ_P0033892 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033893.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36858941 36949782 + MGP_WSBEiJ_P0033893 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033894.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36859143 36947345 + MGP_WSBEiJ_P0033894 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033895.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36859178 36860673 + MGP_WSBEiJ_P0033895 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033896.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36859208 36915206 + MGP_WSBEiJ_P0033896 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033897.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36859707 36947342 + MGP_WSBEiJ_P0033897 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033898.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36859972 36948866 + Etv1 protein_coding retained_intron MGP_WSBEiJ_T0033899.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36859988 36915118 + MGP_WSBEiJ_P0033899 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033900.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36862329 36947742 + MGP_WSBEiJ_P0033900 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033901.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36862340 36947527 + MGP_WSBEiJ_P0033901 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033902.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36862368 36949770 + MGP_WSBEiJ_P0033902 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033903.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36904316 36911164 + MGP_WSBEiJ_P0033903 Etv1 protein_coding protein_coding MGP_WSBEiJ_T0033904.1 MGP_WSBEiJ_G0019049.1 mouse_genomes_project 12 36917345 36947282 + Etv1 protein_coding processed_transcript MGP_WSBEiJ_T0033738.1 MGP_WSBEiJ_G0018987.1 mouse_genomes_project 12 22353331 22490112 + MGP_WSBEiJ_P0033738 Mboat2 protein_coding protein_coding MGP_WSBEiJ_T0033739.1 MGP_WSBEiJ_G0018987.1 mouse_genomes_project 12 22353331 22490112 + MGP_WSBEiJ_P0033739 Mboat2 protein_coding protein_coding MGP_WSBEiJ_T0009691.1 MGP_WSBEiJ_G0007848.1 mouse_genomes_project 12 111049914 111049994 - Mir3071 miRNA miRNA MGP_WSBEiJ_T0011136.1 MGP_WSBEiJ_G0009293.1 mouse_genomes_project 12 86826922 86827007 + Gm27993 misc_RNA misc_RNA MGP_WSBEiJ_T0006313.1 MGP_WSBEiJ_G0005262.1 mouse_genomes_project 12 29291692 29292370 - Gm29541 lincRNA lincRNA MGP_WSBEiJ_T0033649.1 MGP_WSBEiJ_G0018962.1 mouse_genomes_project 12 13110164 13136426 - MGP_WSBEiJ_P0033649 Trib2 protein_coding protein_coding MGP_WSBEiJ_T0033650.1 MGP_WSBEiJ_G0018962.1 mouse_genomes_project 12 13135522 13136518 - Trib2 protein_coding processed_transcript MGP_WSBEiJ_T0000100.1 MGP_WSBEiJ_G0000078.1 mouse_genomes_project 12 116495500 116495934 - MGP_WSBEiJ_P0000100 Ighv1-49 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000101.1 MGP_WSBEiJ_G0000078.1 mouse_genomes_project 12 116495500 116495934 - MGP_WSBEiJ_P0000101 Ighv1-49 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034127.1 MGP_WSBEiJ_G0019136.1 mouse_genomes_project 12 68378723 68381381 + MGP_WSBEiJ_P0034127 9330151L19Rik protein_coding protein_coding MGP_WSBEiJ_T0034507.1 MGP_WSBEiJ_G0019268.1 mouse_genomes_project 12 83983053 83989401 + MGP_WSBEiJ_P0034507 Acot4 protein_coding protein_coding MGP_WSBEiJ_T0034508.1 MGP_WSBEiJ_G0019268.1 mouse_genomes_project 12 83983381 83986901 + Acot4 protein_coding retained_intron MGP_WSBEiJ_T0034353.1 MGP_WSBEiJ_G0019218.1 mouse_genomes_project 12 78357856 78450411 + MGP_WSBEiJ_P0034353 Mpp5 protein_coding protein_coding MGP_WSBEiJ_T0033782.1 MGP_WSBEiJ_G0019006.1 mouse_genomes_project 12 28356735 28363131 + MGP_WSBEiJ_P0033782 Tmem18 protein_coding protein_coding MGP_WSBEiJ_T0012523.1 MGP_WSBEiJ_G0010653.1 mouse_genomes_project 12 28794135 28795709 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034093.1 MGP_WSBEiJ_G0019120.1 mouse_genomes_project 12 61604475 61604898 + MGP_WSBEiJ_P0034093 Spanxn4 protein_coding protein_coding MGP_WSBEiJ_T0012562.1 MGP_WSBEiJ_G0010692.1 mouse_genomes_project 12 102752588 102753048 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100520.1 MGP_WSBEiJ_G0038978.1 mouse_genomes_project 12 105164413 105189246 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0034770.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92219579 92262651 - MGP_WSBEiJ_P0034770 Sel1l protein_coding protein_coding MGP_WSBEiJ_T0034771.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92219579 92262651 - MGP_WSBEiJ_P0034771 Sel1l protein_coding protein_coding MGP_WSBEiJ_T0034772.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92219601 92227485 - Sel1l protein_coding processed_transcript MGP_WSBEiJ_T0034773.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92220157 92262623 - MGP_WSBEiJ_P0034773 Sel1l protein_coding protein_coding MGP_WSBEiJ_T0034774.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92222179 92262624 - Sel1l protein_coding retained_intron MGP_WSBEiJ_T0034775.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92229028 92231773 - Sel1l protein_coding retained_intron MGP_WSBEiJ_T0034776.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92233505 92262624 - Sel1l protein_coding retained_intron MGP_WSBEiJ_T0034777.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92238402 92245455 - Sel1l protein_coding retained_intron MGP_WSBEiJ_T0034778.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92245701 92262633 - Sel1l protein_coding retained_intron MGP_WSBEiJ_T0034779.1 MGP_WSBEiJ_G0019344.1 mouse_genomes_project 12 92254942 92262634 - Sel1l protein_coding retained_intron MGP_WSBEiJ_T0006352.1 MGP_WSBEiJ_G0005293.1 mouse_genomes_project 12 99838732 99840139 + Gm28933 lincRNA lincRNA MGP_WSBEiJ_T0034979.1 MGP_WSBEiJ_G0019412.1 mouse_genomes_project 12 105135400 105142887 - MGP_WSBEiJ_P0034979 Serpina3c protein_coding protein_coding MGP_WSBEiJ_T0033968.1 MGP_WSBEiJ_G0019074.1 mouse_genomes_project 12 50211117 50304834 - MGP_WSBEiJ_P0033968 Hectd1 protein_coding protein_coding MGP_WSBEiJ_T0033969.1 MGP_WSBEiJ_G0019074.1 mouse_genomes_project 12 50211117 50304834 - MGP_WSBEiJ_P0033969 Hectd1 protein_coding protein_coding MGP_WSBEiJ_T0034000.1 MGP_WSBEiJ_G0019089.1 mouse_genomes_project 12 53631811 53743596 - MGP_WSBEiJ_P0034000 2700097O09Rik protein_coding protein_coding MGP_WSBEiJ_T0034001.1 MGP_WSBEiJ_G0019089.1 mouse_genomes_project 12 53631826 53641334 - 2700097O09Rik protein_coding retained_intron MGP_WSBEiJ_T0034002.1 MGP_WSBEiJ_G0019089.1 mouse_genomes_project 12 53640986 53862404 - 2700097O09Rik protein_coding retained_intron MGP_WSBEiJ_T0006393.1 MGP_WSBEiJ_G0005319.1 mouse_genomes_project 12 111096812 111098823 + Gm26945 lincRNA lincRNA MGP_WSBEiJ_T0033912.1 MGP_WSBEiJ_G0019052.1 mouse_genomes_project 12 38322448 38340348 - MGP_WSBEiJ_P0033912 Lsmem1 protein_coding protein_coding MGP_WSBEiJ_T0011137.1 MGP_WSBEiJ_G0009294.1 mouse_genomes_project 12 86997856 86998158 + Gm25888 misc_RNA misc_RNA MGP_WSBEiJ_T0000114.1 MGP_WSBEiJ_G0000087.1 mouse_genomes_project 12 117033950 117034247 - MGP_WSBEiJ_P0000114 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000119.1 MGP_WSBEiJ_G0000087.1 mouse_genomes_project 12 117033954 117034380 - MGP_WSBEiJ_P0000119 IG_V_gene IG_V_gene MGP_WSBEiJ_T0012551.1 MGP_WSBEiJ_G0010681.1 mouse_genomes_project 12 84261957 84262599 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034103.1 MGP_WSBEiJ_G0019128.1 mouse_genomes_project 12 64131393 64172251 - Mis18bp1 protein_coding retained_intron MGP_WSBEiJ_T0034104.1 MGP_WSBEiJ_G0019128.1 mouse_genomes_project 12 64131393 64172227 - MGP_WSBEiJ_P0034104 Mis18bp1 protein_coding protein_coding MGP_WSBEiJ_T0034105.1 MGP_WSBEiJ_G0019128.1 mouse_genomes_project 12 64134984 64137379 - Mis18bp1 protein_coding retained_intron MGP_WSBEiJ_T0034106.1 MGP_WSBEiJ_G0019128.1 mouse_genomes_project 12 64151890 64154206 - Mis18bp1 protein_coding processed_transcript MGP_WSBEiJ_T0034107.1 MGP_WSBEiJ_G0019128.1 mouse_genomes_project 12 64153830 64172213 - Mis18bp1 protein_coding processed_transcript MGP_WSBEiJ_T0034108.1 MGP_WSBEiJ_G0019128.1 mouse_genomes_project 12 64155133 64172225 - Mis18bp1 protein_coding retained_intron MGP_WSBEiJ_T0034700.1 MGP_WSBEiJ_G0019329.1 mouse_genomes_project 12 87496501 87526013 - MGP_WSBEiJ_P0034700 Vipas39 protein_coding protein_coding MGP_WSBEiJ_T0034701.1 MGP_WSBEiJ_G0019329.1 mouse_genomes_project 12 87496501 87523971 - MGP_WSBEiJ_P0034701 Vipas39 protein_coding protein_coding MGP_WSBEiJ_T0034702.1 MGP_WSBEiJ_G0019329.1 mouse_genomes_project 12 87496501 87526013 - MGP_WSBEiJ_P0034702 Vipas39 protein_coding protein_coding MGP_WSBEiJ_T0096943.1 MGP_WSBEiJ_G0035624.1 mouse_genomes_project 12 119721760 119721866 + Gm24741 rRNA rRNA MGP_WSBEiJ_T0003308.1 MGP_WSBEiJ_G0003046.1 mouse_genomes_project 12 210124 236256 - 1110002L01Rik antisense antisense MGP_WSBEiJ_T0003309.1 MGP_WSBEiJ_G0003046.1 mouse_genomes_project 12 211567 235985 - 1110002L01Rik antisense antisense MGP_WSBEiJ_T0003310.1 MGP_WSBEiJ_G0003046.1 mouse_genomes_project 12 214480 235959 - 1110002L01Rik antisense antisense MGP_WSBEiJ_T0003311.1 MGP_WSBEiJ_G0003046.1 mouse_genomes_project 12 214998 235992 - 1110002L01Rik antisense antisense MGP_WSBEiJ_T0006377.1 MGP_WSBEiJ_G0005313.1 mouse_genomes_project 12 109112506 109156324 - Gm15208 lincRNA lincRNA MGP_WSBEiJ_T0034503.1 MGP_WSBEiJ_G0019264.1 mouse_genomes_project 12 83891079 83891745 - MGP_WSBEiJ_P0034503 Gm26571 protein_coding protein_coding MGP_WSBEiJ_T0035108.1 MGP_WSBEiJ_G0019460.1 mouse_genomes_project 12 112172665 112191369 - MGP_WSBEiJ_P0035108 1700001K19Rik protein_coding protein_coding MGP_WSBEiJ_T0034745.1 MGP_WSBEiJ_G0019339.1 mouse_genomes_project 12 91121816 91135746 - MGP_WSBEiJ_P0034745 Dio2 protein_coding protein_coding MGP_WSBEiJ_T0000090.1 MGP_WSBEiJ_G0000070.1 mouse_genomes_project 12 116286888 116287346 - MGP_WSBEiJ_P0000090 Ighv6-3 IG_V_gene IG_V_gene MGP_WSBEiJ_T0012565.1 MGP_WSBEiJ_G0010695.1 mouse_genomes_project 12 107745526 107745872 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034025.1 MGP_WSBEiJ_G0019102.1 mouse_genomes_project 12 55279422 55282549 - MGP_WSBEiJ_P0034025 Nkx2-1 protein_coding protein_coding MGP_WSBEiJ_T0034026.1 MGP_WSBEiJ_G0019102.1 mouse_genomes_project 12 55279422 55284575 - MGP_WSBEiJ_P0034026 Nkx2-1 protein_coding protein_coding MGP_WSBEiJ_T0097772.1 MGP_WSBEiJ_G0036435.1 mouse_genomes_project 12 68804049 68804155 - Gm24449 snRNA snRNA MGP_WSBEiJ_T0011141.1 MGP_WSBEiJ_G0009298.1 mouse_genomes_project 12 110982075 110982280 + Gm27528 misc_RNA misc_RNA MGP_WSBEiJ_T0009669.1 MGP_WSBEiJ_G0007826.1 mouse_genomes_project 12 103564874 103564967 - Mir1936 miRNA miRNA MGP_WSBEiJ_T0034978.1 MGP_WSBEiJ_G0019411.1 mouse_genomes_project 12 105110425 105127345 + MGP_WSBEiJ_P0034978 Serpina3b protein_coding protein_coding MGP_WSBEiJ_T0097752.1 MGP_WSBEiJ_G0036415.1 mouse_genomes_project 12 11792998 11793105 + Gm25414 snRNA snRNA MGP_WSBEiJ_T0000063.1 MGP_WSBEiJ_G0000051.1 mouse_genomes_project 12 115590663 115591199 - MGP_WSBEiJ_P0000063 IG_V_gene IG_V_gene MGP_WSBEiJ_T0009740.1 MGP_WSBEiJ_G0007897.1 mouse_genomes_project 12 111206045 111206126 + Mir410 miRNA miRNA MGP_WSBEiJ_T0096936.1 MGP_WSBEiJ_G0035617.1 mouse_genomes_project 12 81982943 81983039 + n-R5s62 rRNA rRNA MGP_WSBEiJ_T0012525.1 MGP_WSBEiJ_G0010655.1 mouse_genomes_project 12 47557803 47558814 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012573.1 MGP_WSBEiJ_G0010703.1 mouse_genomes_project 12 113465093 113467190 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009700.1 MGP_WSBEiJ_G0007857.1 mouse_genomes_project 12 111172959 111173022 + Mir299a miRNA miRNA MGP_WSBEiJ_T0003354.1 MGP_WSBEiJ_G0003083.1 mouse_genomes_project 12 112169868 112170385 - Gm17111 antisense antisense MGP_WSBEiJ_T0034792.1 MGP_WSBEiJ_G0019350.1 mouse_genomes_project 12 99310646 99373715 - MGP_WSBEiJ_P0034792 Ptpn21 protein_coding protein_coding MGP_WSBEiJ_T0034793.1 MGP_WSBEiJ_G0019350.1 mouse_genomes_project 12 99310646 99376475 - MGP_WSBEiJ_P0034793 Ptpn21 protein_coding protein_coding MGP_WSBEiJ_T0003314.1 MGP_WSBEiJ_G0003049.1 mouse_genomes_project 12 27810193 27812657 + Gm15691 antisense antisense MGP_WSBEiJ_T0011143.1 MGP_WSBEiJ_G0009300.1 mouse_genomes_project 12 110995452 110995549 + Gm27335 misc_RNA misc_RNA MGP_WSBEiJ_T0034384.1 MGP_WSBEiJ_G0019235.1 mouse_genomes_project 12 80256151 80344749 + MGP_WSBEiJ_P0034384 Galnt16 protein_coding protein_coding MGP_WSBEiJ_T0033910.1 MGP_WSBEiJ_G0019051.1 mouse_genomes_project 12 38189615 38270608 - MGP_WSBEiJ_P0033910 Scin protein_coding protein_coding MGP_WSBEiJ_T0033911.1 MGP_WSBEiJ_G0019051.1 mouse_genomes_project 12 38189619 38270653 - MGP_WSBEiJ_P0033911 Scin protein_coding protein_coding MGP_WSBEiJ_T0034707.1 MGP_WSBEiJ_G0019332.1 mouse_genomes_project 12 87564622 87650632 - MGP_WSBEiJ_P0034707 Sptlc2 protein_coding protein_coding MGP_WSBEiJ_T0034708.1 MGP_WSBEiJ_G0019332.1 mouse_genomes_project 12 87567502 87604468 - Sptlc2 protein_coding retained_intron MGP_WSBEiJ_T0034709.1 MGP_WSBEiJ_G0019332.1 mouse_genomes_project 12 87569071 87588683 - Sptlc2 protein_coding processed_transcript MGP_WSBEiJ_T0034710.1 MGP_WSBEiJ_G0019332.1 mouse_genomes_project 12 87607077 87611008 - Sptlc2 protein_coding retained_intron MGP_WSBEiJ_T0034711.1 MGP_WSBEiJ_G0019332.1 mouse_genomes_project 12 87607353 87650518 - Sptlc2 protein_coding processed_transcript MGP_WSBEiJ_T0033810.1 MGP_WSBEiJ_G0019015.1 mouse_genomes_project 12 29312067 29355907 - MGP_WSBEiJ_P0033810 Slc26a4 protein_coding protein_coding MGP_WSBEiJ_T0033811.1 MGP_WSBEiJ_G0019015.1 mouse_genomes_project 12 29330086 29355302 - MGP_WSBEiJ_P0033811 Slc26a4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000242.1 MGP_WSBEiJ_G0000190.1 mouse_genomes_project 12 116182362 116182656 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034007.1 MGP_WSBEiJ_G0019094.1 mouse_genomes_project 12 53987891 54081472 + MGP_WSBEiJ_P0034007 1110008L16Rik protein_coding protein_coding MGP_WSBEiJ_T0034008.1 MGP_WSBEiJ_G0019094.1 mouse_genomes_project 12 53990951 54081548 + MGP_WSBEiJ_P0034008 1110008L16Rik protein_coding protein_coding MGP_WSBEiJ_T0034009.1 MGP_WSBEiJ_G0019094.1 mouse_genomes_project 12 53991064 53997533 + 1110008L16Rik protein_coding retained_intron MGP_WSBEiJ_T0034010.1 MGP_WSBEiJ_G0019094.1 mouse_genomes_project 12 53991557 54081565 + MGP_WSBEiJ_P0034010 1110008L16Rik protein_coding protein_coding MGP_WSBEiJ_T0034011.1 MGP_WSBEiJ_G0019094.1 mouse_genomes_project 12 53991575 54081585 + MGP_WSBEiJ_P0034011 1110008L16Rik protein_coding protein_coding MGP_WSBEiJ_T0034012.1 MGP_WSBEiJ_G0019094.1 mouse_genomes_project 12 53991600 54081565 + MGP_WSBEiJ_P0034012 1110008L16Rik protein_coding protein_coding MGP_WSBEiJ_T0098971.1 MGP_WSBEiJ_G0037634.1 mouse_genomes_project 12 22295798 22295927 + Gm26211 snoRNA snoRNA MGP_WSBEiJ_T0006328.1 MGP_WSBEiJ_G0005273.1 mouse_genomes_project 12 69494216 69500553 + F730035M05Rik lincRNA lincRNA MGP_WSBEiJ_T0033742.1 MGP_WSBEiJ_G0018989.1 mouse_genomes_project 12 22634319 22636617 - MGP_WSBEiJ_P0033742 Id2 protein_coding protein_coding MGP_WSBEiJ_T0003326.1 MGP_WSBEiJ_G0003059.1 mouse_genomes_project 12 56420606 56447275 - 4921518K17Rik antisense antisense MGP_WSBEiJ_T0000087.1 MGP_WSBEiJ_G0000068.1 mouse_genomes_project 12 116256638 116257098 - MGP_WSBEiJ_P0000087 Ighv13-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000088.1 MGP_WSBEiJ_G0000068.1 mouse_genomes_project 12 116256638 116256940 - MGP_WSBEiJ_P0000088 Ighv13-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0012542.1 MGP_WSBEiJ_G0010672.1 mouse_genomes_project 12 75662859 75663093 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003352.1 MGP_WSBEiJ_G0003081.1 mouse_genomes_project 12 104705091 104708061 + B430119L08Rik antisense antisense MGP_WSBEiJ_T0034692.1 MGP_WSBEiJ_G0019325.1 mouse_genomes_project 12 87396158 87419356 + MGP_WSBEiJ_P0034692 Gstz1 protein_coding protein_coding MGP_WSBEiJ_T0034693.1 MGP_WSBEiJ_G0019325.1 mouse_genomes_project 12 87411412 87418465 + MGP_WSBEiJ_P0034693 Gstz1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033836.1 MGP_WSBEiJ_G0019025.1 mouse_genomes_project 12 30794895 30820892 + MGP_WSBEiJ_P0033836 Sypl protein_coding protein_coding MGP_WSBEiJ_T0033837.1 MGP_WSBEiJ_G0019025.1 mouse_genomes_project 12 30795188 30818764 + MGP_WSBEiJ_P0033837 Sypl protein_coding protein_coding MGP_WSBEiJ_T0033838.1 MGP_WSBEiJ_G0019025.1 mouse_genomes_project 12 30795251 30816011 + MGP_WSBEiJ_P0033838 Sypl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033839.1 MGP_WSBEiJ_G0019025.1 mouse_genomes_project 12 30795563 30809523 + Sypl protein_coding processed_transcript MGP_WSBEiJ_T0033840.1 MGP_WSBEiJ_G0019025.1 mouse_genomes_project 12 30806342 30812202 + Sypl protein_coding retained_intron MGP_WSBEiJ_T0033841.1 MGP_WSBEiJ_G0019025.1 mouse_genomes_project 12 30806422 30811301 + Sypl protein_coding processed_transcript MGP_WSBEiJ_T0006326.1 MGP_WSBEiJ_G0005271.1 mouse_genomes_project 12 57822997 57839289 + Gm17529 lincRNA lincRNA MGP_WSBEiJ_T0034355.1 MGP_WSBEiJ_G0019220.1 mouse_genomes_project 12 78471625 78496791 + MGP_WSBEiJ_P0034355 Eif2s1 protein_coding protein_coding MGP_WSBEiJ_T0034671.1 MGP_WSBEiJ_G0019319.1 mouse_genomes_project 12 87076971 87080351 - MGP_WSBEiJ_P0034671 Irf2bpl protein_coding protein_coding MGP_WSBEiJ_T0034125.1 MGP_WSBEiJ_G0019134.1 mouse_genomes_project 12 68364846 68367460 + MGP_WSBEiJ_P0034125 Mgat2 protein_coding protein_coding MGP_WSBEiJ_T0016713.1 MGP_WSBEiJ_G0014653.1 mouse_genomes_project 12 100905575 100911128 + Gm10433 processed_transcript processed_transcript MGP_WSBEiJ_T0016714.1 MGP_WSBEiJ_G0014653.1 mouse_genomes_project 12 100906380 100910333 + Gm10433 processed_transcript processed_transcript MGP_WSBEiJ_T0000109.1 MGP_WSBEiJ_G0000084.1 mouse_genomes_project 12 116939584 116940057 - MGP_WSBEiJ_P0000109 Ighv1-47 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000110.1 MGP_WSBEiJ_G0000084.1 mouse_genomes_project 12 116939584 116939878 - MGP_WSBEiJ_P0000110 Ighv1-47 IG_V_gene IG_V_gene MGP_WSBEiJ_T0009731.1 MGP_WSBEiJ_G0007888.1 mouse_genomes_project 12 111197954 111198036 + Mir453 miRNA miRNA MGP_WSBEiJ_T0009685.1 MGP_WSBEiJ_G0007842.1 mouse_genomes_project 12 111043421 111043510 + Mir3070b miRNA miRNA MGP_WSBEiJ_T0000095.1 MGP_WSBEiJ_G0000074.1 mouse_genomes_project 12 116361685 116362125 - MGP_WSBEiJ_P0000095 Ighv8-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0016704.1 MGP_WSBEiJ_G0014646.1 mouse_genomes_project 12 43664810 43669326 + Gm9921 processed_transcript processed_transcript MGP_WSBEiJ_T0035116.1 MGP_WSBEiJ_G0019462.1 mouse_genomes_project 12 112255763 112347718 + MGP_WSBEiJ_P0035116 protein_coding protein_coding MGP_WSBEiJ_T0035117.1 MGP_WSBEiJ_G0019462.1 mouse_genomes_project 12 112255799 112334065 + MGP_WSBEiJ_P0035117 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035118.1 MGP_WSBEiJ_G0019462.1 mouse_genomes_project 12 112255808 112258060 + protein_coding retained_intron MGP_WSBEiJ_T0035119.1 MGP_WSBEiJ_G0019462.1 mouse_genomes_project 12 112255837 112260022 + protein_coding processed_transcript MGP_WSBEiJ_T0035120.1 MGP_WSBEiJ_G0019462.1 mouse_genomes_project 12 112256028 112334237 + MGP_WSBEiJ_P0035120 protein_coding protein_coding MGP_WSBEiJ_T0035122.1 MGP_WSBEiJ_G0019462.1 mouse_genomes_project 12 112315673 112347509 + protein_coding processed_transcript MGP_WSBEiJ_T0033707.1 MGP_WSBEiJ_G0018979.1 mouse_genomes_project 12 18765510 18817258 - MGP_WSBEiJ_P0033707 Adam17 protein_coding protein_coding MGP_WSBEiJ_T0033708.1 MGP_WSBEiJ_G0018979.1 mouse_genomes_project 12 18765518 18817297 - MGP_WSBEiJ_P0033708 Adam17 protein_coding protein_coding MGP_WSBEiJ_T0033709.1 MGP_WSBEiJ_G0018979.1 mouse_genomes_project 12 18765518 18817258 - MGP_WSBEiJ_P0033709 Adam17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033710.1 MGP_WSBEiJ_G0018979.1 mouse_genomes_project 12 18765518 18817258 - MGP_WSBEiJ_P0033710 Adam17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033711.1 MGP_WSBEiJ_G0018979.1 mouse_genomes_project 12 18767526 18771314 - Adam17 protein_coding processed_transcript MGP_WSBEiJ_T0033712.1 MGP_WSBEiJ_G0018979.1 mouse_genomes_project 12 18770011 18788425 - Adam17 protein_coding retained_intron MGP_WSBEiJ_T0033713.1 MGP_WSBEiJ_G0018979.1 mouse_genomes_project 12 18772096 18774535 - Adam17 protein_coding retained_intron MGP_WSBEiJ_T0033714.1 MGP_WSBEiJ_G0018979.1 mouse_genomes_project 12 18794213 18817199 - MGP_WSBEiJ_P0033714 Adam17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034835.1 MGP_WSBEiJ_G0019362.1 mouse_genomes_project 12 101281530 101466637 - MGP_WSBEiJ_P0034835 Rps6ka5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034836.1 MGP_WSBEiJ_G0019362.1 mouse_genomes_project 12 101282873 101466785 - MGP_WSBEiJ_P0034836 Rps6ka5 protein_coding protein_coding MGP_WSBEiJ_T0035249.1 MGP_WSBEiJ_G0019512.1 mouse_genomes_project 12 114684173 114748481 + MGP_WSBEiJ_P0035249 Pacs2 protein_coding protein_coding MGP_WSBEiJ_T0033882.1 MGP_WSBEiJ_G0019043.1 mouse_genomes_project 12 34283053 34287336 + MGP_WSBEiJ_P0033882 Sostdc1 protein_coding protein_coding MGP_WSBEiJ_T0000011.1 MGP_WSBEiJ_G0000008.1 mouse_genomes_project 12 115088857 115090515 - MGP_WSBEiJ_P0000011 Ighg3 IG_C_gene IG_C_gene MGP_WSBEiJ_T0034670.1 MGP_WSBEiJ_G0019318.1 mouse_genomes_project 12 86917927 86947934 + MGP_WSBEiJ_P0034670 Lrrc74a protein_coding protein_coding MGP_WSBEiJ_T0098975.1 MGP_WSBEiJ_G0037638.1 mouse_genomes_project 12 29041539 29041669 - Gm24613 snoRNA snoRNA MGP_WSBEiJ_T0012519.1 MGP_WSBEiJ_G0010649.1 mouse_genomes_project 12 5880409 5882790 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034901.1 MGP_WSBEiJ_G0019384.1 mouse_genomes_project 12 103648043 103667774 + MGP_WSBEiJ_P0034901 Ubr7 protein_coding protein_coding MGP_WSBEiJ_T0034800.1 MGP_WSBEiJ_G0019353.1 mouse_genomes_project 12 99565749 99627120 + MGP_WSBEiJ_P0034800 Ttc8 protein_coding protein_coding MGP_WSBEiJ_T0034801.1 MGP_WSBEiJ_G0019353.1 mouse_genomes_project 12 99565787 99627126 + MGP_WSBEiJ_P0034801 Ttc8 protein_coding protein_coding MGP_WSBEiJ_T0034802.1 MGP_WSBEiJ_G0019353.1 mouse_genomes_project 12 99565995 99605304 + MGP_WSBEiJ_P0034802 Ttc8 protein_coding protein_coding MGP_WSBEiJ_T0034803.1 MGP_WSBEiJ_G0019353.1 mouse_genomes_project 12 99587487 99614477 + Ttc8 protein_coding processed_transcript MGP_WSBEiJ_T0034804.1 MGP_WSBEiJ_G0019353.1 mouse_genomes_project 12 99617919 99626260 + Ttc8 protein_coding processed_transcript MGP_WSBEiJ_T0034805.1 MGP_WSBEiJ_G0019353.1 mouse_genomes_project 12 99617948 99623489 + Ttc8 protein_coding processed_transcript MGP_WSBEiJ_T0033913.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38342603 38365107 - MGP_WSBEiJ_P0033913 Ifrd1 protein_coding protein_coding MGP_WSBEiJ_T0033914.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38344167 38348105 - MGP_WSBEiJ_P0033914 Ifrd1 protein_coding protein_coding MGP_WSBEiJ_T0033915.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38344356 38345679 - Ifrd1 protein_coding retained_intron MGP_WSBEiJ_T0033916.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38344955 38364880 - MGP_WSBEiJ_P0033916 Ifrd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033917.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38355022 38391723 - MGP_WSBEiJ_P0033917 Ifrd1 protein_coding protein_coding MGP_WSBEiJ_T0033918.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38355079 38358556 - MGP_WSBEiJ_P0033918 Ifrd1 protein_coding protein_coding MGP_WSBEiJ_T0033919.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38355136 38392130 - MGP_WSBEiJ_P0033919 Ifrd1 protein_coding protein_coding MGP_WSBEiJ_T0033920.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38356404 38365103 - Ifrd1 protein_coding retained_intron MGP_WSBEiJ_T0033921.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38357231 38392148 - MGP_WSBEiJ_P0033921 Ifrd1 protein_coding protein_coding MGP_WSBEiJ_T0033922.1 MGP_WSBEiJ_G0019053.1 mouse_genomes_project 12 38358200 38365067 - MGP_WSBEiJ_P0033922 Ifrd1 protein_coding protein_coding MGP_WSBEiJ_T0003339.1 MGP_WSBEiJ_G0003070.1 mouse_genomes_project 12 82921032 82961629 - Gm29530 antisense antisense MGP_WSBEiJ_T0016716.1 MGP_WSBEiJ_G0014655.1 mouse_genomes_project 12 103553006 103611156 - Gm28373 processed_transcript processed_transcript MGP_WSBEiJ_T0034699.1 MGP_WSBEiJ_G0019328.1 mouse_genomes_project 12 87476807 87489770 - MGP_WSBEiJ_P0034699 Noxred1 protein_coding protein_coding MGP_WSBEiJ_T0034238.1 MGP_WSBEiJ_G0019174.1 mouse_genomes_project 12 71977736 71995248 - MGP_WSBEiJ_P0034238 Dhrs7 protein_coding protein_coding MGP_WSBEiJ_T0006369.1 MGP_WSBEiJ_G0005306.1 mouse_genomes_project 12 108143285 108185989 + 1700013N06Rik lincRNA lincRNA MGP_WSBEiJ_T0012558.1 MGP_WSBEiJ_G0010688.1 mouse_genomes_project 12 99894289 99894540 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000246.1 MGP_WSBEiJ_G0000194.1 mouse_genomes_project 12 116435330 116435632 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0097761.1 MGP_WSBEiJ_G0036424.1 mouse_genomes_project 12 52777180 52777329 + Gm22220 snRNA snRNA MGP_WSBEiJ_T0003345.1 MGP_WSBEiJ_G0003076.1 mouse_genomes_project 12 99995164 100016687 + 3300002A11Rik antisense antisense MGP_WSBEiJ_T0003346.1 MGP_WSBEiJ_G0003076.1 mouse_genomes_project 12 100000471 100016687 + 3300002A11Rik antisense antisense MGP_WSBEiJ_T0096930.1 MGP_WSBEiJ_G0035611.1 mouse_genomes_project 12 43588436 43588520 + Gm22076 rRNA rRNA MGP_WSBEiJ_T0033564.1 MGP_WSBEiJ_G0018923.1 mouse_genomes_project 12 1478262 1597139 + MGP_WSBEiJ_P0033564 Itsn2 protein_coding protein_coding MGP_WSBEiJ_T0033565.1 MGP_WSBEiJ_G0018923.1 mouse_genomes_project 12 1498606 1559687 + MGP_WSBEiJ_P0033565 Itsn2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035244.1 MGP_WSBEiJ_G0019509.1 mouse_genomes_project 12 114627483 114670338 - MGP_WSBEiJ_P0035244 Brf1 protein_coding protein_coding MGP_WSBEiJ_T0035245.1 MGP_WSBEiJ_G0019509.1 mouse_genomes_project 12 114627942 114641073 - MGP_WSBEiJ_P0035245 Brf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035165.1 MGP_WSBEiJ_G0019480.1 mouse_genomes_project 12 113259829 113262812 - MGP_WSBEiJ_P0035165 Ckb protein_coding protein_coding MGP_WSBEiJ_T0034886.1 MGP_WSBEiJ_G0019376.1 mouse_genomes_project 12 103338946 103368327 + MGP_WSBEiJ_P0034886 Golga5 protein_coding protein_coding MGP_WSBEiJ_T0034887.1 MGP_WSBEiJ_G0019376.1 mouse_genomes_project 12 103339726 103368327 + MGP_WSBEiJ_P0034887 Golga5 protein_coding protein_coding MGP_WSBEiJ_T0099005.1 MGP_WSBEiJ_G0037668.1 mouse_genomes_project 12 91973663 91973806 - Gm25776 snoRNA snoRNA MGP_WSBEiJ_T0096772.1 MGP_WSBEiJ_G0035453.1 mouse_genomes_project 12 84429104 84430488 + pseudogene pseudogene MGP_WSBEiJ_T0033775.1 MGP_WSBEiJ_G0019005.1 mouse_genomes_project 12 27922207 28124943 - MGP_WSBEiJ_P0033775 Sntg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033776.1 MGP_WSBEiJ_G0019005.1 mouse_genomes_project 12 27922208 28124990 - MGP_WSBEiJ_P0033776 Sntg2 protein_coding protein_coding MGP_WSBEiJ_T0033777.1 MGP_WSBEiJ_G0019005.1 mouse_genomes_project 12 27922713 28124880 - MGP_WSBEiJ_P0033777 Sntg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033778.1 MGP_WSBEiJ_G0019005.1 mouse_genomes_project 12 27922718 28124943 - MGP_WSBEiJ_P0033778 Sntg2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033779.1 MGP_WSBEiJ_G0019005.1 mouse_genomes_project 12 27936595 27942876 - Sntg2 protein_coding retained_intron MGP_WSBEiJ_T0033780.1 MGP_WSBEiJ_G0019005.1 mouse_genomes_project 12 28010388 28107217 - Sntg2 protein_coding processed_transcript MGP_WSBEiJ_T0033781.1 MGP_WSBEiJ_G0019005.1 mouse_genomes_project 12 28051931 28124958 - Sntg2 protein_coding processed_transcript MGP_WSBEiJ_T0034237.1 MGP_WSBEiJ_G0019173.1 mouse_genomes_project 12 71942742 71957642 - MGP_WSBEiJ_P0034237 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0035127.1 MGP_WSBEiJ_G0019465.1 mouse_genomes_project 12 112399234 112420093 + MGP_WSBEiJ_P0035127 Zfp839 protein_coding protein_coding MGP_WSBEiJ_T0012538.1 MGP_WSBEiJ_G0010668.1 mouse_genomes_project 12 61821292 61822314 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000134.1 MGP_WSBEiJ_G0000101.1 mouse_genomes_project 12 118083422 118083872 - MGP_WSBEiJ_P0000134 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033666.1 MGP_WSBEiJ_G0018966.1 mouse_genomes_project 12 14170486 14186290 + MGP_WSBEiJ_P0033666 E2f6 protein_coding protein_coding MGP_WSBEiJ_T0033667.1 MGP_WSBEiJ_G0018966.1 mouse_genomes_project 12 14170491 14186307 + MGP_WSBEiJ_P0033667 E2f6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000072.1 MGP_WSBEiJ_G0000059.1 mouse_genomes_project 12 116063716 116077209 - MGP_WSBEiJ_P0000072 IG_V_gene IG_V_gene MGP_WSBEiJ_T0006330.1 MGP_WSBEiJ_G0005275.1 mouse_genomes_project 12 73705143 73716684 + lincRNA lincRNA MGP_WSBEiJ_T0006331.1 MGP_WSBEiJ_G0005275.1 mouse_genomes_project 12 73705151 73716698 + lincRNA lincRNA MGP_WSBEiJ_T0006332.1 MGP_WSBEiJ_G0005275.1 mouse_genomes_project 12 73709597 73716698 + lincRNA lincRNA MGP_WSBEiJ_T0035294.1 MGP_WSBEiJ_G0019523.1 mouse_genomes_project 12 118525092 118583572 + MGP_WSBEiJ_P0035294 Ncapg2 protein_coding protein_coding MGP_WSBEiJ_T0034263.1 MGP_WSBEiJ_G0019183.1 mouse_genomes_project 12 72733364 72742183 - MGP_WSBEiJ_P0034263 D830013O20Rik protein_coding protein_coding MGP_WSBEiJ_T0033750.1 MGP_WSBEiJ_G0018994.1 mouse_genomes_project 12 26207500 26213656 - protein_coding processed_transcript MGP_WSBEiJ_T0033751.1 MGP_WSBEiJ_G0018994.1 mouse_genomes_project 12 26212997 26221556 - protein_coding processed_transcript MGP_WSBEiJ_T0033752.1 MGP_WSBEiJ_G0018994.1 mouse_genomes_project 12 26213225 26248517 - MGP_WSBEiJ_P0033752 protein_coding protein_coding MGP_WSBEiJ_T0000124.1 MGP_WSBEiJ_G0000093.1 mouse_genomes_project 12 118083421 118083880 - MGP_WSBEiJ_P0000124 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000129.1 MGP_WSBEiJ_G0000093.1 mouse_genomes_project 12 118083421 118083715 - MGP_WSBEiJ_P0000129 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033653.1 MGP_WSBEiJ_G0018964.1 mouse_genomes_project 12 14000556 14007275 + MGP_WSBEiJ_P0033653 Ntsr2 protein_coding protein_coding MGP_WSBEiJ_T0000253.1 MGP_WSBEiJ_G0000201.1 mouse_genomes_project 12 116549537 116550022 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0097777.1 MGP_WSBEiJ_G0036440.1 mouse_genomes_project 12 76980158 76980318 + Gm25926 snRNA snRNA MGP_WSBEiJ_T0034535.1 MGP_WSBEiJ_G0019276.1 mouse_genomes_project 12 84321425 84346198 + MGP_WSBEiJ_P0034535 Zfp410 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034536.1 MGP_WSBEiJ_G0019276.1 mouse_genomes_project 12 84321431 84350831 + MGP_WSBEiJ_P0034536 Zfp410 protein_coding protein_coding MGP_WSBEiJ_T0003312.1 MGP_WSBEiJ_G0003047.1 mouse_genomes_project 12 572802 583321 - Dtnbos antisense antisense MGP_WSBEiJ_T0097768.1 MGP_WSBEiJ_G0036431.1 mouse_genomes_project 12 62528147 62528254 + Gm24921 snRNA snRNA MGP_WSBEiJ_T0012563.1 MGP_WSBEiJ_G0010693.1 mouse_genomes_project 12 104572136 104572794 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006315.1 MGP_WSBEiJ_G0005264.1 mouse_genomes_project 12 30759435 30794794 - 4933406C10Rik lincRNA lincRNA MGP_WSBEiJ_T0006316.1 MGP_WSBEiJ_G0005264.1 mouse_genomes_project 12 30764961 30794788 - 4933406C10Rik lincRNA lincRNA MGP_WSBEiJ_T0033734.1 MGP_WSBEiJ_G0018986.1 mouse_genomes_project 12 22222114 22228716 + MGP_WSBEiJ_P0033734 Rrm2 protein_coding protein_coding MGP_WSBEiJ_T0033735.1 MGP_WSBEiJ_G0018986.1 mouse_genomes_project 12 22222429 22223459 + Rrm2 protein_coding retained_intron MGP_WSBEiJ_T0033736.1 MGP_WSBEiJ_G0018986.1 mouse_genomes_project 12 22222625 22226466 + MGP_WSBEiJ_P0033736 Rrm2 protein_coding protein_coding MGP_WSBEiJ_T0033737.1 MGP_WSBEiJ_G0018986.1 mouse_genomes_project 12 22222898 22227913 + MGP_WSBEiJ_P0033737 Rrm2 protein_coding protein_coding MGP_WSBEiJ_T0096944.1 MGP_WSBEiJ_G0035625.1 mouse_genomes_project 12 122100121 122100239 - Gm25675 rRNA rRNA MGP_WSBEiJ_T0000841.1 MGP_WSBEiJ_G0000780.1 mouse_genomes_project 12 114343611 114346190 - TEC TEC MGP_WSBEiJ_T0012585.1 MGP_WSBEiJ_G0010715.1 mouse_genomes_project 12 122186216 122186658 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006338.1 MGP_WSBEiJ_G0005279.1 mouse_genomes_project 12 79813140 79825439 - 2310015A10Rik lincRNA lincRNA MGP_WSBEiJ_T0035162.1 MGP_WSBEiJ_G0019479.1 mouse_genomes_project 12 113159342 113246919 + MGP_WSBEiJ_P0035162 Mark3 protein_coding protein_coding MGP_WSBEiJ_T0035163.1 MGP_WSBEiJ_G0019479.1 mouse_genomes_project 12 113159342 113246919 + MGP_WSBEiJ_P0035163 Mark3 protein_coding protein_coding MGP_WSBEiJ_T0035164.1 MGP_WSBEiJ_G0019479.1 mouse_genomes_project 12 113203800 113246915 + MGP_WSBEiJ_P0035164 Mark3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033943.1 MGP_WSBEiJ_G0019062.1 mouse_genomes_project 12 43064193 43292397 - MGP_WSBEiJ_P0033943 Stxbp6 protein_coding protein_coding MGP_WSBEiJ_T0033944.1 MGP_WSBEiJ_G0019062.1 mouse_genomes_project 12 43066927 43292778 - MGP_WSBEiJ_P0033944 Stxbp6 protein_coding protein_coding MGP_WSBEiJ_T0033945.1 MGP_WSBEiJ_G0019062.1 mouse_genomes_project 12 43072899 43229019 - Stxbp6 protein_coding processed_transcript MGP_WSBEiJ_T0033946.1 MGP_WSBEiJ_G0019062.1 mouse_genomes_project 12 43113971 43292439 - MGP_WSBEiJ_P0033946 Stxbp6 protein_coding protein_coding MGP_WSBEiJ_T0033947.1 MGP_WSBEiJ_G0019062.1 mouse_genomes_project 12 43228986 43292603 - MGP_WSBEiJ_P0033947 Stxbp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000086.1 MGP_WSBEiJ_G0000067.1 mouse_genomes_project 12 116228589 116229064 - MGP_WSBEiJ_P0000086 Ighv3-8 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033953.1 MGP_WSBEiJ_G0019065.1 mouse_genomes_project 12 47751491 47760453 + MGP_WSBEiJ_P0033953 Gm43517 protein_coding protein_coding MGP_WSBEiJ_T0097750.1 MGP_WSBEiJ_G0036413.1 mouse_genomes_project 12 9913357 9913464 + Gm25538 snRNA snRNA MGP_WSBEiJ_T0000231.1 MGP_WSBEiJ_G0000179.1 mouse_genomes_project 12 115468311 115468635 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0003343.1 MGP_WSBEiJ_G0003074.1 mouse_genomes_project 12 91449414 91473244 + 5430427M07Rik antisense antisense MGP_WSBEiJ_T0009711.1 MGP_WSBEiJ_G0007868.1 mouse_genomes_project 12 111179413 111179512 + Mir666 miRNA miRNA MGP_WSBEiJ_T0098999.1 MGP_WSBEiJ_G0037662.1 mouse_genomes_project 12 77381969 77382099 - Gm24070 snoRNA snoRNA MGP_WSBEiJ_T0035168.1 MGP_WSBEiJ_G0019482.1 mouse_genomes_project 12 113304030 113307779 - MGP_WSBEiJ_P0035168 Bag5 protein_coding protein_coding MGP_WSBEiJ_T0035169.1 MGP_WSBEiJ_G0019482.1 mouse_genomes_project 12 113304429 113307449 - MGP_WSBEiJ_P0035169 Bag5 protein_coding protein_coding MGP_WSBEiJ_T0035170.1 MGP_WSBEiJ_G0019482.1 mouse_genomes_project 12 113305734 113307475 - MGP_WSBEiJ_P0035170 Bag5 protein_coding protein_coding MGP_WSBEiJ_T0035171.1 MGP_WSBEiJ_G0019482.1 mouse_genomes_project 12 113305800 113307475 - MGP_WSBEiJ_P0035171 Bag5 protein_coding protein_coding MGP_WSBEiJ_T0099032.1 MGP_WSBEiJ_G0037695.1 mouse_genomes_project 12 111151182 111151250 + Gm25224 snoRNA snoRNA MGP_WSBEiJ_T0006295.1 MGP_WSBEiJ_G0005248.1 mouse_genomes_project 12 2281390 2326926 + 2810032G03Rik lincRNA lincRNA MGP_WSBEiJ_T0006296.1 MGP_WSBEiJ_G0005248.1 mouse_genomes_project 12 2322240 2327254 + 2810032G03Rik lincRNA lincRNA MGP_WSBEiJ_T0034628.1 MGP_WSBEiJ_G0019309.1 mouse_genomes_project 12 85864784 85935545 + MGP_WSBEiJ_P0034628 Mfsd7c protein_coding protein_coding MGP_WSBEiJ_T0000236.1 MGP_WSBEiJ_G0000184.1 mouse_genomes_project 12 115707501 115707921 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0003338.1 MGP_WSBEiJ_G0003069.1 mouse_genomes_project 12 82784255 82790890 - 1700085C21Rik antisense antisense MGP_WSBEiJ_T0034976.1 MGP_WSBEiJ_G0019410.1 mouse_genomes_project 12 105095010 105104309 + MGP_WSBEiJ_P0034976 protein_coding protein_coding MGP_WSBEiJ_T0034977.1 MGP_WSBEiJ_G0019410.1 mouse_genomes_project 12 105095117 105104232 + MGP_WSBEiJ_P0034977 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000082.1 MGP_WSBEiJ_G0000065.1 mouse_genomes_project 12 116202461 116202892 - MGP_WSBEiJ_P0000082 Ighv3-6 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000083.1 MGP_WSBEiJ_G0000065.1 mouse_genomes_project 12 116202466 116202892 - MGP_WSBEiJ_P0000083 Ighv3-6 IG_V_gene IG_V_gene MGP_WSBEiJ_T0003349.1 MGP_WSBEiJ_G0003079.1 mouse_genomes_project 12 104223091 104224730 - Gm29508 antisense antisense MGP_WSBEiJ_T0003350.1 MGP_WSBEiJ_G0003079.1 mouse_genomes_project 12 104223092 104225494 - Gm29508 antisense antisense MGP_WSBEiJ_T0012543.1 MGP_WSBEiJ_G0010673.1 mouse_genomes_project 12 76326232 76326536 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000103.1 MGP_WSBEiJ_G0000080.1 mouse_genomes_project 12 116527410 116527698 - MGP_WSBEiJ_P0000103 Ighv1-12 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000104.1 MGP_WSBEiJ_G0000080.1 mouse_genomes_project 12 116527410 116527873 - MGP_WSBEiJ_P0000104 Ighv1-12 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034506.1 MGP_WSBEiJ_G0019267.1 mouse_genomes_project 12 83927624 83932880 + MGP_WSBEiJ_P0034506 protein_coding protein_coding MGP_WSBEiJ_T0009737.1 MGP_WSBEiJ_G0007894.1 mouse_genomes_project 12 111205488 111205567 + Mir409 miRNA miRNA MGP_WSBEiJ_T0003315.1 MGP_WSBEiJ_G0003050.1 mouse_genomes_project 12 29278178 29279110 + Gm29542 antisense antisense MGP_WSBEiJ_T0006412.1 MGP_WSBEiJ_G0005326.1 mouse_genomes_project 12 113157144 113159235 - 2810029C07Rik lincRNA lincRNA MGP_WSBEiJ_T0099018.1 MGP_WSBEiJ_G0037681.1 mouse_genomes_project 12 111110330 111110402 + Gm23508 snoRNA snoRNA MGP_WSBEiJ_T0034872.1 MGP_WSBEiJ_G0019372.1 mouse_genomes_project 12 102827410 102858245 + MGP_WSBEiJ_P0034872 Cpsf2 protein_coding protein_coding MGP_WSBEiJ_T0034197.1 MGP_WSBEiJ_G0019160.1 mouse_genomes_project 12 70301690 70374138 + MGP_WSBEiJ_P0034197 Arid4a protein_coding protein_coding MGP_WSBEiJ_T0034198.1 MGP_WSBEiJ_G0019160.1 mouse_genomes_project 12 70301729 70354834 + Arid4a protein_coding processed_transcript MGP_WSBEiJ_T0034199.1 MGP_WSBEiJ_G0019160.1 mouse_genomes_project 12 70302408 70334996 + MGP_WSBEiJ_P0034199 Arid4a protein_coding protein_coding MGP_WSBEiJ_T0034200.1 MGP_WSBEiJ_G0019160.1 mouse_genomes_project 12 70335994 70362760 + MGP_WSBEiJ_P0034200 Arid4a protein_coding protein_coding MGP_WSBEiJ_T0009686.1 MGP_WSBEiJ_G0007843.1 mouse_genomes_project 12 111045238 111045329 + Mir431 miRNA miRNA MGP_WSBEiJ_T0034596.1 MGP_WSBEiJ_G0019295.1 mouse_genomes_project 12 85146072 85156778 - MGP_WSBEiJ_P0034596 Prox2 protein_coding protein_coding MGP_WSBEiJ_T0034597.1 MGP_WSBEiJ_G0019295.1 mouse_genomes_project 12 85146500 85166135 - MGP_WSBEiJ_P0034597 Prox2 protein_coding protein_coding MGP_WSBEiJ_T0034598.1 MGP_WSBEiJ_G0019295.1 mouse_genomes_project 12 85153731 85155324 - Prox2 protein_coding retained_intron MGP_WSBEiJ_T0006413.1 MGP_WSBEiJ_G0005327.1 mouse_genomes_project 12 114614088 114618254 - Gm26583 lincRNA lincRNA MGP_WSBEiJ_T0006300.1 MGP_WSBEiJ_G0005252.1 mouse_genomes_project 12 6683375 6688818 - 1700022H16Rik lincRNA lincRNA MGP_WSBEiJ_T0012574.1 MGP_WSBEiJ_G0010704.1 mouse_genomes_project 12 114854038 114854847 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100507.1 MGP_WSBEiJ_G0038966.1 mouse_genomes_project 12 47317268 47317508 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009653.1 MGP_WSBEiJ_G0007810.1 mouse_genomes_project 12 71803097 71803212 - Gm44392 miRNA miRNA MGP_WSBEiJ_T0034210.1 MGP_WSBEiJ_G0019165.1 mouse_genomes_project 12 71144090 71305517 + MGP_WSBEiJ_P0034210 Daam1 protein_coding protein_coding MGP_WSBEiJ_T0033797.1 MGP_WSBEiJ_G0019012.1 mouse_genomes_project 12 29116047 29135597 - MGP_WSBEiJ_P0033797 Dld protein_coding protein_coding MGP_WSBEiJ_T0034254.1 MGP_WSBEiJ_G0019180.1 mouse_genomes_project 12 72481559 72641950 + MGP_WSBEiJ_P0034254 Mnat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034255.1 MGP_WSBEiJ_G0019180.1 mouse_genomes_project 12 72481559 72643086 + MGP_WSBEiJ_P0034255 Mnat1 protein_coding protein_coding MGP_WSBEiJ_T0034256.1 MGP_WSBEiJ_G0019180.1 mouse_genomes_project 12 72481559 72600385 + MGP_WSBEiJ_P0034256 Mnat1 protein_coding protein_coding MGP_WSBEiJ_T0035220.1 MGP_WSBEiJ_G0019499.1 mouse_genomes_project 12 114304957 114325113 - MGP_WSBEiJ_P0035220 Akt1 protein_coding protein_coding MGP_WSBEiJ_T0035221.1 MGP_WSBEiJ_G0019499.1 mouse_genomes_project 12 114305803 114322624 - MGP_WSBEiJ_P0035221 Akt1 protein_coding protein_coding MGP_WSBEiJ_T0035222.1 MGP_WSBEiJ_G0019499.1 mouse_genomes_project 12 114306992 114308062 - Akt1 protein_coding retained_intron MGP_WSBEiJ_T0035223.1 MGP_WSBEiJ_G0019499.1 mouse_genomes_project 12 114308182 114310731 - Akt1 protein_coding retained_intron MGP_WSBEiJ_T0035224.1 MGP_WSBEiJ_G0019499.1 mouse_genomes_project 12 114308650 114310236 - Akt1 protein_coding retained_intron MGP_WSBEiJ_T0035225.1 MGP_WSBEiJ_G0019499.1 mouse_genomes_project 12 114309518 114325721 - MGP_WSBEiJ_P0035225 Akt1 protein_coding protein_coding MGP_WSBEiJ_T0035226.1 MGP_WSBEiJ_G0019499.1 mouse_genomes_project 12 114310253 114324991 - MGP_WSBEiJ_P0035226 Akt1 protein_coding protein_coding MGP_WSBEiJ_T0035227.1 MGP_WSBEiJ_G0019499.1 mouse_genomes_project 12 114310359 114319193 - Akt1 protein_coding processed_transcript MGP_WSBEiJ_T0006345.1 MGP_WSBEiJ_G0005286.1 mouse_genomes_project 12 86308552 86334635 + Gm805 lincRNA lincRNA MGP_WSBEiJ_T0035011.1 MGP_WSBEiJ_G0019433.1 mouse_genomes_project 12 106818089 106820347 + MGP_WSBEiJ_P0035011 Bdkrb1 protein_coding protein_coding MGP_WSBEiJ_T0035012.1 MGP_WSBEiJ_G0019433.1 mouse_genomes_project 12 106818123 106819990 + MGP_WSBEiJ_P0035012 Bdkrb1 protein_coding protein_coding MGP_WSBEiJ_T0035013.1 MGP_WSBEiJ_G0019433.1 mouse_genomes_project 12 106819098 106820436 + MGP_WSBEiJ_P0035013 Bdkrb1 protein_coding protein_coding MGP_WSBEiJ_T0012583.1 MGP_WSBEiJ_G0010713.1 mouse_genomes_project 12 118704086 118704379 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097778.1 MGP_WSBEiJ_G0036441.1 mouse_genomes_project 12 78361572 78361674 - Gm25225 snRNA snRNA MGP_WSBEiJ_T0098995.1 MGP_WSBEiJ_G0037658.1 mouse_genomes_project 12 64570800 64570932 - Gm23948 snoRNA snoRNA MGP_WSBEiJ_T0034137.1 MGP_WSBEiJ_G0019140.1 mouse_genomes_project 12 68506569 68554259 - MGP_WSBEiJ_P0034137 Nemf protein_coding protein_coding MGP_WSBEiJ_T0034491.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83713227 83858432 - MGP_WSBEiJ_P0034491 Numb protein_coding protein_coding MGP_WSBEiJ_T0034492.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83713229 83808525 - MGP_WSBEiJ_P0034492 Numb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034493.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83713264 83858342 - MGP_WSBEiJ_P0034493 Numb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034494.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83714632 83763686 - MGP_WSBEiJ_P0034494 Numb protein_coding protein_coding MGP_WSBEiJ_T0034495.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83714632 83763686 - MGP_WSBEiJ_P0034495 Numb protein_coding protein_coding MGP_WSBEiJ_T0034496.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83714632 83763686 - MGP_WSBEiJ_P0034496 Numb protein_coding protein_coding MGP_WSBEiJ_T0034497.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83723157 83858365 - MGP_WSBEiJ_P0034497 Numb protein_coding protein_coding MGP_WSBEiJ_T0034498.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83727301 83858354 - MGP_WSBEiJ_P0034498 Numb protein_coding protein_coding MGP_WSBEiJ_T0034499.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83727372 83858381 - MGP_WSBEiJ_P0034499 Numb protein_coding protein_coding MGP_WSBEiJ_T0034500.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83731193 83858388 - MGP_WSBEiJ_P0034500 Numb protein_coding protein_coding MGP_WSBEiJ_T0034501.1 MGP_WSBEiJ_G0019262.1 mouse_genomes_project 12 83753314 83808513 - Numb protein_coding retained_intron MGP_WSBEiJ_T0009722.1 MGP_WSBEiJ_G0007879.1 mouse_genomes_project 12 111189648 111189730 + Mir487b miRNA miRNA MGP_WSBEiJ_T0006347.1 MGP_WSBEiJ_G0005288.1 mouse_genomes_project 12 87086921 87088084 - Gm26698 lincRNA lincRNA MGP_WSBEiJ_T0033755.1 MGP_WSBEiJ_G0018997.1 mouse_genomes_project 12 26334595 26339732 - MGP_WSBEiJ_P0033755 Rps7 protein_coding protein_coding MGP_WSBEiJ_T0099019.1 MGP_WSBEiJ_G0037682.1 mouse_genomes_project 12 111111924 111111996 + Gm26922 snoRNA snoRNA MGP_WSBEiJ_T0000238.1 MGP_WSBEiJ_G0000186.1 mouse_genomes_project 12 115802743 115803173 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0033763.1 MGP_WSBEiJ_G0019001.1 mouse_genomes_project 12 26458992 26578773 + MGP_WSBEiJ_P0033763 Tssc1 protein_coding protein_coding MGP_WSBEiJ_T0033772.1 MGP_WSBEiJ_G0019004.1 mouse_genomes_project 12 27806345 27881289 - MGP_WSBEiJ_P0033772 Tpo protein_coding protein_coding MGP_WSBEiJ_T0033773.1 MGP_WSBEiJ_G0019004.1 mouse_genomes_project 12 27840121 27842971 - Tpo protein_coding retained_intron MGP_WSBEiJ_T0033774.1 MGP_WSBEiJ_G0019004.1 mouse_genomes_project 12 27864140 27880564 - MGP_WSBEiJ_P0033774 Tpo protein_coding protein_coding MGP_WSBEiJ_T0100508.1 MGP_WSBEiJ_G0038967.1 mouse_genomes_project 12 53257703 53258206 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035198.1 MGP_WSBEiJ_G0019489.1 mouse_genomes_project 12 113584869 113677100 + MGP_WSBEiJ_P0035198 Tdrd9 protein_coding protein_coding MGP_WSBEiJ_T0035204.1 MGP_WSBEiJ_G0019489.1 mouse_genomes_project 12 113608365 113676592 + MGP_WSBEiJ_P0035204 Tdrd9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035205.1 MGP_WSBEiJ_G0019489.1 mouse_genomes_project 12 113608365 113676592 + MGP_WSBEiJ_P0035205 Tdrd9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035206.1 MGP_WSBEiJ_G0019489.1 mouse_genomes_project 12 113628438 113636581 + Tdrd9 protein_coding retained_intron MGP_WSBEiJ_T0035207.1 MGP_WSBEiJ_G0019489.1 mouse_genomes_project 12 113637024 113652710 + Tdrd9 protein_coding processed_transcript MGP_WSBEiJ_T0035208.1 MGP_WSBEiJ_G0019489.1 mouse_genomes_project 12 113671028 113675635 + Tdrd9 protein_coding retained_intron MGP_WSBEiJ_T0096768.1 MGP_WSBEiJ_G0035449.1 mouse_genomes_project 12 6554212 6554766 + pseudogene pseudogene MGP_WSBEiJ_T0035235.1 MGP_WSBEiJ_G0019503.1 mouse_genomes_project 12 114430282 114464349 - MGP_WSBEiJ_P0035235 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035236.1 MGP_WSBEiJ_G0019503.1 mouse_genomes_project 12 114430282 114464349 - MGP_WSBEiJ_P0035236 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035237.1 MGP_WSBEiJ_G0019503.1 mouse_genomes_project 12 114430529 114433350 - MGP_WSBEiJ_P0035237 protein_coding protein_coding MGP_WSBEiJ_T0012521.1 MGP_WSBEiJ_G0010651.1 mouse_genomes_project 12 11022062 11023030 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012537.1 MGP_WSBEiJ_G0010667.1 mouse_genomes_project 12 60380468 60380996 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035286.1 MGP_WSBEiJ_G0019520.1 mouse_genomes_project 12 118184711 118247272 + Vipr2 protein_coding retained_intron MGP_WSBEiJ_T0035287.1 MGP_WSBEiJ_G0019520.1 mouse_genomes_project 12 118184713 118253512 + MGP_WSBEiJ_P0035287 Vipr2 protein_coding protein_coding MGP_WSBEiJ_T0035288.1 MGP_WSBEiJ_G0019520.1 mouse_genomes_project 12 118184745 118206731 + Vipr2 protein_coding processed_transcript MGP_WSBEiJ_T0035289.1 MGP_WSBEiJ_G0019520.1 mouse_genomes_project 12 118184751 118203105 + Vipr2 protein_coding processed_transcript MGP_WSBEiJ_T0035290.1 MGP_WSBEiJ_G0019520.1 mouse_genomes_project 12 118184758 118240628 + Vipr2 protein_coding processed_transcript MGP_WSBEiJ_T0035291.1 MGP_WSBEiJ_G0019520.1 mouse_genomes_project 12 118244651 118251047 + MGP_WSBEiJ_P0035291 Vipr2 protein_coding protein_coding MGP_WSBEiJ_T0034998.1 MGP_WSBEiJ_G0019427.1 mouse_genomes_project 12 106277046 106359274 + MGP_WSBEiJ_P0034998 Tcl1b1 protein_coding protein_coding MGP_WSBEiJ_T0012584.1 MGP_WSBEiJ_G0010714.1 mouse_genomes_project 12 119994246 119994591 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035065.1 MGP_WSBEiJ_G0019448.1 mouse_genomes_project 12 110127387 110142893 - MGP_WSBEiJ_P0035065 Degs2 protein_coding protein_coding MGP_WSBEiJ_T0035066.1 MGP_WSBEiJ_G0019448.1 mouse_genomes_project 12 110130817 110142893 - MGP_WSBEiJ_P0035066 Degs2 protein_coding protein_coding MGP_WSBEiJ_T0012570.1 MGP_WSBEiJ_G0010700.1 mouse_genomes_project 12 108763792 108764081 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034856.1 MGP_WSBEiJ_G0019368.1 mouse_genomes_project 12 102487503 102562647 - MGP_WSBEiJ_P0034856 Tc2n protein_coding protein_coding MGP_WSBEiJ_T0034857.1 MGP_WSBEiJ_G0019368.1 mouse_genomes_project 12 102488621 102555519 - MGP_WSBEiJ_P0034857 Tc2n protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034858.1 MGP_WSBEiJ_G0019368.1 mouse_genomes_project 12 102491086 102553275 - MGP_WSBEiJ_P0034858 Tc2n protein_coding protein_coding MGP_WSBEiJ_T0034859.1 MGP_WSBEiJ_G0019368.1 mouse_genomes_project 12 102491133 102555312 - MGP_WSBEiJ_P0034859 Tc2n protein_coding protein_coding MGP_WSBEiJ_T0000007.1 MGP_WSBEiJ_G0000005.1 mouse_genomes_project 12 115032345 115033994 - MGP_WSBEiJ_P0000007 IG_C_gene IG_C_gene MGP_WSBEiJ_T0034974.1 MGP_WSBEiJ_G0019408.1 mouse_genomes_project 12 104984883 105000545 - MGP_WSBEiJ_P0034974 Serpina12 protein_coding protein_coding MGP_WSBEiJ_T0098965.1 MGP_WSBEiJ_G0037628.1 mouse_genomes_project 12 6757115 6757243 - Gm23979 snoRNA snoRNA MGP_WSBEiJ_T0100509.1 MGP_WSBEiJ_G0038968.1 mouse_genomes_project 12 75099760 75108413 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100510.1 MGP_WSBEiJ_G0038968.1 mouse_genomes_project 12 75100445 75108437 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009693.1 MGP_WSBEiJ_G0007850.1 mouse_genomes_project 12 111067265 111067361 + Mir341 miRNA miRNA MGP_WSBEiJ_T0096771.1 MGP_WSBEiJ_G0035452.1 mouse_genomes_project 12 84039108 84039719 - pseudogene pseudogene MGP_WSBEiJ_T0034258.1 MGP_WSBEiJ_G0019182.1 mouse_genomes_project 12 72656933 72723601 + MGP_WSBEiJ_P0034258 Slc38a6 protein_coding protein_coding MGP_WSBEiJ_T0034259.1 MGP_WSBEiJ_G0019182.1 mouse_genomes_project 12 72656944 72687717 + MGP_WSBEiJ_P0034259 Slc38a6 protein_coding protein_coding MGP_WSBEiJ_T0034260.1 MGP_WSBEiJ_G0019182.1 mouse_genomes_project 12 72657062 72687706 + MGP_WSBEiJ_P0034260 Slc38a6 protein_coding protein_coding MGP_WSBEiJ_T0034261.1 MGP_WSBEiJ_G0019182.1 mouse_genomes_project 12 72687329 72709039 + Slc38a6 protein_coding retained_intron MGP_WSBEiJ_T0034262.1 MGP_WSBEiJ_G0019182.1 mouse_genomes_project 12 72713417 72720460 + Slc38a6 protein_coding retained_intron MGP_WSBEiJ_T0003313.1 MGP_WSBEiJ_G0003048.1 mouse_genomes_project 12 689303 692255 - Dnmt3aos antisense antisense MGP_WSBEiJ_T0000128.1 MGP_WSBEiJ_G0000096.1 mouse_genomes_project 12 118083421 118083874 - MGP_WSBEiJ_P0000128 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034712.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87692523 87696115 - Alkbh1 protein_coding processed_transcript MGP_WSBEiJ_T0034713.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87692852 87711441 - MGP_WSBEiJ_P0034713 Alkbh1 protein_coding protein_coding MGP_WSBEiJ_T0034714.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87694760 87711428 - MGP_WSBEiJ_P0034714 Alkbh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034715.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87694760 87711430 - MGP_WSBEiJ_P0034715 Alkbh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034716.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87694763 87711438 - MGP_WSBEiJ_P0034716 Alkbh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034717.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87695487 87711430 - MGP_WSBEiJ_P0034717 Alkbh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034718.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87695798 87706035 - MGP_WSBEiJ_P0034718 Alkbh1 protein_coding protein_coding MGP_WSBEiJ_T0034719.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87698131 87709337 - Alkbh1 protein_coding processed_transcript MGP_WSBEiJ_T0034720.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87699947 87711435 - MGP_WSBEiJ_P0034720 Alkbh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034721.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87699958 87711441 - Alkbh1 protein_coding retained_intron MGP_WSBEiJ_T0034722.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87710284 87711619 - Alkbh1 protein_coding retained_intron MGP_WSBEiJ_T0034723.1 MGP_WSBEiJ_G0019333.1 mouse_genomes_project 12 87711112 87711520 - MGP_WSBEiJ_P0034723 Alkbh1 protein_coding protein_coding MGP_WSBEiJ_T0009708.1 MGP_WSBEiJ_G0007865.1 mouse_genomes_project 12 111177642 111177727 + Mir494 miRNA miRNA MGP_WSBEiJ_T0009651.1 MGP_WSBEiJ_G0007808.1 mouse_genomes_project 12 68994650 68994760 - Mir681 miRNA miRNA MGP_WSBEiJ_T0096932.1 MGP_WSBEiJ_G0035613.1 mouse_genomes_project 12 53241857 53241967 - Gm24971 rRNA rRNA MGP_WSBEiJ_T0035231.1 MGP_WSBEiJ_G0019501.1 mouse_genomes_project 12 114377821 114402302 + MGP_WSBEiJ_P0035231 Cep170b protein_coding protein_coding MGP_WSBEiJ_T0035232.1 MGP_WSBEiJ_G0019501.1 mouse_genomes_project 12 114377841 114402298 + MGP_WSBEiJ_P0035232 Cep170b protein_coding protein_coding MGP_WSBEiJ_T0035233.1 MGP_WSBEiJ_G0019501.1 mouse_genomes_project 12 114377841 114402298 + MGP_WSBEiJ_P0035233 Cep170b protein_coding protein_coding MGP_WSBEiJ_T0034349.1 MGP_WSBEiJ_G0019216.1 mouse_genomes_project 12 77816845 78292843 + MGP_WSBEiJ_P0034349 Gphn protein_coding protein_coding MGP_WSBEiJ_T0034350.1 MGP_WSBEiJ_G0019216.1 mouse_genomes_project 12 77816845 78292843 + MGP_WSBEiJ_P0034350 Gphn protein_coding protein_coding MGP_WSBEiJ_T0034351.1 MGP_WSBEiJ_G0019216.1 mouse_genomes_project 12 77816968 78292842 + MGP_WSBEiJ_P0034351 Gphn protein_coding unknown_likely_coding MGP_WSBEiJ_T0003344.1 MGP_WSBEiJ_G0003075.1 mouse_genomes_project 12 92091767 92101867 + Gm16876 antisense antisense MGP_WSBEiJ_T0096939.1 MGP_WSBEiJ_G0035620.1 mouse_genomes_project 12 91203559 91203676 + n-R5s65 rRNA rRNA MGP_WSBEiJ_T0009631.1 MGP_WSBEiJ_G0007788.1 mouse_genomes_project 12 8469675 8469733 + Mir7675 miRNA miRNA MGP_WSBEiJ_T0033835.1 MGP_WSBEiJ_G0019024.1 mouse_genomes_project 12 30657613 30692286 + MGP_WSBEiJ_P0033835 Nampt protein_coding protein_coding MGP_WSBEiJ_T0033788.1 MGP_WSBEiJ_G0019009.1 mouse_genomes_project 12 28850714 28856546 + MGP_WSBEiJ_P0033788 Fam110c protein_coding protein_coding MGP_WSBEiJ_T0097280.1 MGP_WSBEiJ_G0035957.1 mouse_genomes_project 12 84975196 84976166 - Gm17193 sense_intronic sense_intronic MGP_WSBEiJ_T0034682.1 MGP_WSBEiJ_G0019321.1 mouse_genomes_project 12 87193669 87198998 - MGP_WSBEiJ_P0034682 Zdhhc22 protein_coding protein_coding MGP_WSBEiJ_T0034370.1 MGP_WSBEiJ_G0019228.1 mouse_genomes_project 12 78847146 78862624 + MGP_WSBEiJ_P0034370 Rdh12 protein_coding protein_coding MGP_WSBEiJ_T0034371.1 MGP_WSBEiJ_G0019228.1 mouse_genomes_project 12 78847163 78862623 + MGP_WSBEiJ_P0034371 Rdh12 protein_coding protein_coding MGP_WSBEiJ_T0034372.1 MGP_WSBEiJ_G0019228.1 mouse_genomes_project 12 78847179 78862623 + Rdh12 protein_coding retained_intron MGP_WSBEiJ_T0034373.1 MGP_WSBEiJ_G0019228.1 mouse_genomes_project 12 78848893 78850952 + MGP_WSBEiJ_P0034373 Rdh12 protein_coding protein_coding MGP_WSBEiJ_T0034257.1 MGP_WSBEiJ_G0019181.1 mouse_genomes_project 12 72649752 72656866 - MGP_WSBEiJ_P0034257 Trmt5 protein_coding protein_coding MGP_WSBEiJ_T0012580.1 MGP_WSBEiJ_G0010710.1 mouse_genomes_project 12 117698068 117699304 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034827.1 MGP_WSBEiJ_G0019358.1 mouse_genomes_project 12 100819154 100833618 + MGP_WSBEiJ_P0034827 Psmc1 protein_coding protein_coding MGP_WSBEiJ_T0099022.1 MGP_WSBEiJ_G0037685.1 mouse_genomes_project 12 111117845 111117917 + Gm27604 snoRNA snoRNA MGP_WSBEiJ_T0033973.1 MGP_WSBEiJ_G0019077.1 mouse_genomes_project 12 50515044 50520445 - MGP_WSBEiJ_P0033973 Gpr33 protein_coding protein_coding MGP_WSBEiJ_T0000098.1 MGP_WSBEiJ_G0000077.1 mouse_genomes_project 12 116479563 116479998 - MGP_WSBEiJ_P0000098 Ighv15-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000099.1 MGP_WSBEiJ_G0000077.1 mouse_genomes_project 12 116479563 116479998 - MGP_WSBEiJ_P0000099 Ighv15-2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034664.1 MGP_WSBEiJ_G0019317.1 mouse_genomes_project 12 86881158 86909996 - MGP_WSBEiJ_P0034664 Angel1 protein_coding protein_coding MGP_WSBEiJ_T0034665.1 MGP_WSBEiJ_G0019317.1 mouse_genomes_project 12 86882849 86886824 - Angel1 protein_coding processed_transcript MGP_WSBEiJ_T0034666.1 MGP_WSBEiJ_G0019317.1 mouse_genomes_project 12 86882967 86898133 - Angel1 protein_coding processed_transcript MGP_WSBEiJ_T0034667.1 MGP_WSBEiJ_G0019317.1 mouse_genomes_project 12 86883009 86886619 - Angel1 protein_coding processed_transcript MGP_WSBEiJ_T0034668.1 MGP_WSBEiJ_G0019317.1 mouse_genomes_project 12 86883093 86899677 - Angel1 protein_coding processed_transcript MGP_WSBEiJ_T0034669.1 MGP_WSBEiJ_G0019317.1 mouse_genomes_project 12 86899836 86903429 - Angel1 protein_coding processed_transcript MGP_WSBEiJ_T0034324.1 MGP_WSBEiJ_G0019208.1 mouse_genomes_project 12 76119709 76253788 - MGP_WSBEiJ_P0034324 Sptb protein_coding protein_coding MGP_WSBEiJ_T0034325.1 MGP_WSBEiJ_G0019208.1 mouse_genomes_project 12 76122455 76123311 - Sptb protein_coding retained_intron MGP_WSBEiJ_T0034326.1 MGP_WSBEiJ_G0019208.1 mouse_genomes_project 12 76135733 76253264 - MGP_WSBEiJ_P0034326 Sptb protein_coding protein_coding MGP_WSBEiJ_T0096938.1 MGP_WSBEiJ_G0035619.1 mouse_genomes_project 12 85832770 85832889 - n-R5s64 rRNA rRNA MGP_WSBEiJ_T0098968.1 MGP_WSBEiJ_G0037631.1 mouse_genomes_project 12 14305560 14310156 + Gm22303 snoRNA snoRNA MGP_WSBEiJ_T0096933.1 MGP_WSBEiJ_G0035614.1 mouse_genomes_project 12 54786652 54786772 - Gm23799 rRNA rRNA MGP_WSBEiJ_T0034162.1 MGP_WSBEiJ_G0019150.1 mouse_genomes_project 12 69205939 69216090 + MGP_WSBEiJ_P0034162 Gm3086 protein_coding protein_coding MGP_WSBEiJ_T0033555.1 MGP_WSBEiJ_G0018920.1 mouse_genomes_project 12 1044152 1065013 - MGP_WSBEiJ_P0033555 Cenpo protein_coding protein_coding MGP_WSBEiJ_T0033556.1 MGP_WSBEiJ_G0018920.1 mouse_genomes_project 12 1045970 1080055 - MGP_WSBEiJ_P0033556 Cenpo protein_coding protein_coding MGP_WSBEiJ_T0033558.1 MGP_WSBEiJ_G0018920.1 mouse_genomes_project 12 1061948 1064973 - Cenpo protein_coding retained_intron MGP_WSBEiJ_T0033559.1 MGP_WSBEiJ_G0018920.1 mouse_genomes_project 12 1062017 1080007 - MGP_WSBEiJ_P0033559 Cenpo protein_coding protein_coding MGP_WSBEiJ_T0033560.1 MGP_WSBEiJ_G0018920.1 mouse_genomes_project 12 1063824 1078093 - MGP_WSBEiJ_P0033560 Cenpo protein_coding protein_coding MGP_WSBEiJ_T0033561.1 MGP_WSBEiJ_G0018920.1 mouse_genomes_project 12 1064158 1080028 - Cenpo protein_coding retained_intron MGP_WSBEiJ_T0033956.1 MGP_WSBEiJ_G0019068.1 mouse_genomes_project 12 49568382 49570439 - MGP_WSBEiJ_P0033956 protein_coding protein_coding MGP_WSBEiJ_T0033543.1 MGP_WSBEiJ_G0018916.1 mouse_genomes_project 12 792090 797766 + MGP_WSBEiJ_P0033543 Pomc protein_coding protein_coding MGP_WSBEiJ_T0003319.1 MGP_WSBEiJ_G0003054.1 mouse_genomes_project 12 38350529 38352116 - Gm17024 antisense antisense MGP_WSBEiJ_T0033676.1 MGP_WSBEiJ_G0018969.1 mouse_genomes_project 12 14374752 14383011 - MGP_WSBEiJ_P0033676 2410004P03Rik protein_coding protein_coding MGP_WSBEiJ_T0033677.1 MGP_WSBEiJ_G0018969.1 mouse_genomes_project 12 14377025 14382838 - MGP_WSBEiJ_P0033677 2410004P03Rik protein_coding protein_coding MGP_WSBEiJ_T0033678.1 MGP_WSBEiJ_G0018969.1 mouse_genomes_project 12 14378574 14382787 - MGP_WSBEiJ_P0033678 2410004P03Rik protein_coding protein_coding MGP_WSBEiJ_T0009716.1 MGP_WSBEiJ_G0007873.1 mouse_genomes_project 12 111185530 111185614 + Mir654 miRNA miRNA MGP_WSBEiJ_T0035172.1 MGP_WSBEiJ_G0019483.1 mouse_genomes_project 12 113307782 113328544 + MGP_WSBEiJ_P0035172 Apopt1 protein_coding protein_coding MGP_WSBEiJ_T0035173.1 MGP_WSBEiJ_G0019483.1 mouse_genomes_project 12 113307801 113354697 + MGP_WSBEiJ_P0035173 Apopt1 protein_coding protein_coding MGP_WSBEiJ_T0035174.1 MGP_WSBEiJ_G0019483.1 mouse_genomes_project 12 113307801 113349866 + MGP_WSBEiJ_P0035174 Apopt1 protein_coding protein_coding MGP_WSBEiJ_T0035175.1 MGP_WSBEiJ_G0019483.1 mouse_genomes_project 12 113307805 113317270 + MGP_WSBEiJ_P0035175 Apopt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035176.1 MGP_WSBEiJ_G0019483.1 mouse_genomes_project 12 113307807 113321443 + MGP_WSBEiJ_P0035176 Apopt1 protein_coding protein_coding MGP_WSBEiJ_T0009680.1 MGP_WSBEiJ_G0007837.1 mouse_genomes_project 12 111040610 111040707 + Mir337 miRNA miRNA MGP_WSBEiJ_T0000229.1 MGP_WSBEiJ_G0000177.1 mouse_genomes_project 12 115467738 115468635 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0035016.1 MGP_WSBEiJ_G0019435.1 mouse_genomes_project 12 106898442 106915475 + MGP_WSBEiJ_P0035016 Gskip protein_coding protein_coding MGP_WSBEiJ_T0012540.1 MGP_WSBEiJ_G0010670.1 mouse_genomes_project 12 68314788 68315425 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033743.1 MGP_WSBEiJ_G0018990.1 mouse_genomes_project 12 23902070 24016919 - MGP_WSBEiJ_P0033743 Rnf144a protein_coding protein_coding MGP_WSBEiJ_T0033744.1 MGP_WSBEiJ_G0018990.1 mouse_genomes_project 12 23902070 24016919 - MGP_WSBEiJ_P0033744 Rnf144a protein_coding protein_coding MGP_WSBEiJ_T0034990.1 MGP_WSBEiJ_G0019420.1 mouse_genomes_project 12 105585252 105587375 - MGP_WSBEiJ_P0034990 Gsc protein_coding protein_coding MGP_WSBEiJ_T0035017.1 MGP_WSBEiJ_G0019436.1 mouse_genomes_project 12 106918423 107006617 + MGP_WSBEiJ_P0035017 Ak7 protein_coding protein_coding MGP_WSBEiJ_T0006301.1 MGP_WSBEiJ_G0005253.1 mouse_genomes_project 12 8619904 8626484 + 4930511A02Rik lincRNA lincRNA MGP_WSBEiJ_T0006370.1 MGP_WSBEiJ_G0005307.1 mouse_genomes_project 12 108262548 108267114 - lincRNA lincRNA MGP_WSBEiJ_T0000138.1 MGP_WSBEiJ_G0000104.1 mouse_genomes_project 12 118083625 118083715 - MGP_WSBEiJ_P0000138 IG_V_gene IG_V_gene MGP_WSBEiJ_T0097771.1 MGP_WSBEiJ_G0036434.1 mouse_genomes_project 12 68329376 68329480 - Gm24499 snRNA snRNA MGP_WSBEiJ_T0097766.1 MGP_WSBEiJ_G0036429.1 mouse_genomes_project 12 59611415 59611522 + Gm23059 snRNA snRNA MGP_WSBEiJ_T0034385.1 MGP_WSBEiJ_G0019236.1 mouse_genomes_project 12 80377688 80387778 - MGP_WSBEiJ_P0034385 Erh protein_coding protein_coding MGP_WSBEiJ_T0034386.1 MGP_WSBEiJ_G0019236.1 mouse_genomes_project 12 80377904 80387269 - MGP_WSBEiJ_P0034386 Erh protein_coding protein_coding MGP_WSBEiJ_T0034620.1 MGP_WSBEiJ_G0019306.1 mouse_genomes_project 12 85569790 85573167 + MGP_WSBEiJ_P0034620 Fos protein_coding protein_coding MGP_WSBEiJ_T0034621.1 MGP_WSBEiJ_G0019306.1 mouse_genomes_project 12 85570591 85571915 + Fos protein_coding processed_transcript MGP_WSBEiJ_T0034622.1 MGP_WSBEiJ_G0019306.1 mouse_genomes_project 12 85570591 85572093 + Fos protein_coding processed_transcript MGP_WSBEiJ_T0034623.1 MGP_WSBEiJ_G0019306.1 mouse_genomes_project 12 85570811 85571971 + Fos protein_coding processed_transcript MGP_WSBEiJ_T0009739.1 MGP_WSBEiJ_G0007896.1 mouse_genomes_project 12 111205748 111205827 + Mir369 miRNA miRNA MGP_WSBEiJ_T0034208.1 MGP_WSBEiJ_G0019164.1 mouse_genomes_project 12 70592545 70603281 + MGP_WSBEiJ_P0034208 Dact1 protein_coding protein_coding MGP_WSBEiJ_T0034209.1 MGP_WSBEiJ_G0019164.1 mouse_genomes_project 12 70592645 70602068 + MGP_WSBEiJ_P0034209 Dact1 protein_coding protein_coding MGP_WSBEiJ_T0035311.1 MGP_WSBEiJ_G0019529.1 mouse_genomes_project 12 121046271 121052515 + MGP_WSBEiJ_P0035311 Sp8 protein_coding protein_coding MGP_WSBEiJ_T0012550.1 MGP_WSBEiJ_G0010680.1 mouse_genomes_project 12 83535605 83535993 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097760.1 MGP_WSBEiJ_G0036423.1 mouse_genomes_project 12 51101315 51101422 - Gm23296 snRNA snRNA MGP_WSBEiJ_T0035262.1 MGP_WSBEiJ_G0019515.1 mouse_genomes_project 12 114820615 114825871 + MGP_WSBEiJ_P0035262 Crip2 protein_coding protein_coding MGP_WSBEiJ_T0035263.1 MGP_WSBEiJ_G0019515.1 mouse_genomes_project 12 114820951 114825468 + MGP_WSBEiJ_P0035263 Crip2 protein_coding protein_coding MGP_WSBEiJ_T0035264.1 MGP_WSBEiJ_G0019515.1 mouse_genomes_project 12 114823187 114825495 + MGP_WSBEiJ_P0035264 Crip2 protein_coding protein_coding MGP_WSBEiJ_T0035265.1 MGP_WSBEiJ_G0019515.1 mouse_genomes_project 12 114823712 114825334 + Crip2 protein_coding retained_intron MGP_WSBEiJ_T0035266.1 MGP_WSBEiJ_G0019515.1 mouse_genomes_project 12 114823841 114824596 + Crip2 protein_coding retained_intron MGP_WSBEiJ_T0035267.1 MGP_WSBEiJ_G0019515.1 mouse_genomes_project 12 114824450 114825069 + Crip2 protein_coding retained_intron MGP_WSBEiJ_T0012545.1 MGP_WSBEiJ_G0010675.1 mouse_genomes_project 12 78802084 78802432 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096769.1 MGP_WSBEiJ_G0035450.1 mouse_genomes_project 12 32894917 32896535 + pseudogene pseudogene MGP_WSBEiJ_T0012524.1 MGP_WSBEiJ_G0010654.1 mouse_genomes_project 12 43136138 43137240 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009692.1 MGP_WSBEiJ_G0007849.1 mouse_genomes_project 12 111049923 111049985 + Mir136 miRNA miRNA MGP_WSBEiJ_T0012533.1 MGP_WSBEiJ_G0010663.1 mouse_genomes_project 12 56463802 56464240 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035315.1 MGP_WSBEiJ_G0019531.1 mouse_genomes_project 12 121373714 121458525 - MGP_WSBEiJ_P0035315 Itgb8 protein_coding protein_coding MGP_WSBEiJ_T0035316.1 MGP_WSBEiJ_G0019531.1 mouse_genomes_project 12 121406352 121458524 - Itgb8 protein_coding retained_intron MGP_WSBEiJ_T0035317.1 MGP_WSBEiJ_G0019531.1 mouse_genomes_project 12 121419561 121458493 - Itgb8 protein_coding retained_intron MGP_WSBEiJ_T0033980.1 MGP_WSBEiJ_G0019081.1 mouse_genomes_project 12 51746866 52595509 + MGP_WSBEiJ_P0033980 Npas3 protein_coding protein_coding MGP_WSBEiJ_T0033981.1 MGP_WSBEiJ_G0019081.1 mouse_genomes_project 12 51746866 52595510 + MGP_WSBEiJ_P0033981 Npas3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009748.1 MGP_WSBEiJ_G0007905.1 mouse_genomes_project 12 114388973 114389043 + Mir6940 miRNA miRNA MGP_WSBEiJ_T0100522.1 MGP_WSBEiJ_G0038980.1 mouse_genomes_project 12 115099944 115101150 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097769.1 MGP_WSBEiJ_G0036432.1 mouse_genomes_project 12 64540162 64540265 + Gm25599 snRNA snRNA MGP_WSBEiJ_T0035243.1 MGP_WSBEiJ_G0019508.1 mouse_genomes_project 12 114602213 114609832 - MGP_WSBEiJ_P0035243 Nudt14 protein_coding protein_coding MGP_WSBEiJ_T0000829.1 MGP_WSBEiJ_G0000768.1 mouse_genomes_project 12 59748849 59761449 + TEC TEC MGP_WSBEiJ_T0034202.1 MGP_WSBEiJ_G0019162.1 mouse_genomes_project 12 70410425 70424038 - MGP_WSBEiJ_P0034202 Timm9 protein_coding protein_coding MGP_WSBEiJ_T0034203.1 MGP_WSBEiJ_G0019162.1 mouse_genomes_project 12 70410425 70424038 - MGP_WSBEiJ_P0034203 Timm9 protein_coding protein_coding MGP_WSBEiJ_T0033567.1 MGP_WSBEiJ_G0018925.1 mouse_genomes_project 12 1597005 1622552 - MGP_WSBEiJ_P0033567 Fam228a protein_coding protein_coding MGP_WSBEiJ_T0099028.1 MGP_WSBEiJ_G0037691.1 mouse_genomes_project 12 111144823 111144898 + Gm25856 snoRNA snoRNA MGP_WSBEiJ_T0035195.1 MGP_WSBEiJ_G0019487.1 mouse_genomes_project 12 113435324 113514656 - MGP_WSBEiJ_P0035195 Ppp1r13b protein_coding protein_coding MGP_WSBEiJ_T0035196.1 MGP_WSBEiJ_G0019487.1 mouse_genomes_project 12 113473475 113514641 - MGP_WSBEiJ_P0035196 Ppp1r13b protein_coding protein_coding MGP_WSBEiJ_T0012569.1 MGP_WSBEiJ_G0010699.1 mouse_genomes_project 12 108534501 108535492 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000058.1 MGP_WSBEiJ_G0000047.1 mouse_genomes_project 12 115580675 115581206 + MGP_WSBEiJ_P0000058 IG_V_gene IG_V_gene MGP_WSBEiJ_T0035318.1 MGP_WSBEiJ_G0019532.1 mouse_genomes_project 12 121666349 121692651 + MGP_WSBEiJ_P0035318 Macc1 protein_coding protein_coding MGP_WSBEiJ_T0033812.1 MGP_WSBEiJ_G0019016.1 mouse_genomes_project 12 29397839 29437324 - MGP_WSBEiJ_P0033812 Bcap29 protein_coding protein_coding MGP_WSBEiJ_T0033813.1 MGP_WSBEiJ_G0019016.1 mouse_genomes_project 12 29397839 29437263 - MGP_WSBEiJ_P0033813 Bcap29 protein_coding protein_coding MGP_WSBEiJ_T0035161.1 MGP_WSBEiJ_G0019478.1 mouse_genomes_project 12 113118447 113124819 + MGP_WSBEiJ_P0035161 Eif5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035129.1 MGP_WSBEiJ_G0019467.1 mouse_genomes_project 12 112443557 112533634 + MGP_WSBEiJ_P0035129 Tecpr2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035228.1 MGP_WSBEiJ_G0019500.1 mouse_genomes_project 12 114329701 114333660 + MGP_WSBEiJ_P0035228 Zbtb42 protein_coding protein_coding MGP_WSBEiJ_T0035229.1 MGP_WSBEiJ_G0019500.1 mouse_genomes_project 12 114329713 114333660 + MGP_WSBEiJ_P0035229 Zbtb42 protein_coding protein_coding MGP_WSBEiJ_T0035230.1 MGP_WSBEiJ_G0019500.1 mouse_genomes_project 12 114329751 114330848 + MGP_WSBEiJ_P0035230 Zbtb42 protein_coding protein_coding MGP_WSBEiJ_T0000006.1 MGP_WSBEiJ_G0000004.1 mouse_genomes_project 12 114957430 114959505 - MGP_WSBEiJ_P0000006 Ighe IG_C_gene IG_C_gene MGP_WSBEiJ_T0033860.1 MGP_WSBEiJ_G0019031.1 mouse_genomes_project 12 31969753 32188411 - MGP_WSBEiJ_P0033860 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096931.1 MGP_WSBEiJ_G0035612.1 mouse_genomes_project 12 51547594 51547713 - n-R5s58 rRNA rRNA MGP_WSBEiJ_T0034703.1 MGP_WSBEiJ_G0019330.1 mouse_genomes_project 12 87526472 87533723 + MGP_WSBEiJ_P0034703 Ahsa1 protein_coding protein_coding MGP_WSBEiJ_T0034509.1 MGP_WSBEiJ_G0019269.1 mouse_genomes_project 12 84000157 84007563 + MGP_WSBEiJ_P0034509 Acot3 protein_coding protein_coding MGP_WSBEiJ_T0034510.1 MGP_WSBEiJ_G0019269.1 mouse_genomes_project 12 84000164 84007563 + MGP_WSBEiJ_P0034510 Acot3 protein_coding protein_coding MGP_WSBEiJ_T0098984.1 MGP_WSBEiJ_G0037647.1 mouse_genomes_project 12 44232417 44232624 + Gm24948 snoRNA snoRNA MGP_WSBEiJ_T0034327.1 MGP_WSBEiJ_G0019209.1 mouse_genomes_project 12 76297424 76465714 + MGP_WSBEiJ_P0034327 Fntb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034328.1 MGP_WSBEiJ_G0019209.1 mouse_genomes_project 12 76297433 76465287 + MGP_WSBEiJ_P0034328 Fntb protein_coding protein_coding MGP_WSBEiJ_T0034338.1 MGP_WSBEiJ_G0019209.1 mouse_genomes_project 12 76376366 76466467 + MGP_WSBEiJ_P0034338 Fntb protein_coding protein_coding MGP_WSBEiJ_T0034339.1 MGP_WSBEiJ_G0019209.1 mouse_genomes_project 12 76376385 76383549 + Fntb protein_coding processed_transcript MGP_WSBEiJ_T0034340.1 MGP_WSBEiJ_G0019209.1 mouse_genomes_project 12 76379170 76430610 + Fntb protein_coding processed_transcript MGP_WSBEiJ_T0034341.1 MGP_WSBEiJ_G0019209.1 mouse_genomes_project 12 76429862 76455795 + Fntb protein_coding processed_transcript MGP_WSBEiJ_T0034342.1 MGP_WSBEiJ_G0019209.1 mouse_genomes_project 12 76455046 76455874 + Fntb protein_coding processed_transcript MGP_WSBEiJ_T0034343.1 MGP_WSBEiJ_G0019209.1 mouse_genomes_project 12 76455540 76460205 + Fntb protein_coding retained_intron MGP_WSBEiJ_T0012554.1 MGP_WSBEiJ_G0010684.1 mouse_genomes_project 12 88619611 88620045 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000027.1 MGP_WSBEiJ_G0000021.1 mouse_genomes_project 12 115211802 115211814 - IG_D_gene processed_transcript MGP_WSBEiJ_T0009729.1 MGP_WSBEiJ_G0007886.1 mouse_genomes_project 12 111197067 111197133 + Mir668 miRNA miRNA MGP_WSBEiJ_T0034276.1 MGP_WSBEiJ_G0019191.1 mouse_genomes_project 12 74346052 74634361 - MGP_WSBEiJ_P0034276 Kcnh5 protein_coding protein_coding MGP_WSBEiJ_T0034763.1 MGP_WSBEiJ_G0019343.1 mouse_genomes_project 12 92044104 92199195 - MGP_WSBEiJ_P0034763 protein_coding protein_coding MGP_WSBEiJ_T0034764.1 MGP_WSBEiJ_G0019343.1 mouse_genomes_project 12 92048413 92156116 - MGP_WSBEiJ_P0034764 protein_coding protein_coding MGP_WSBEiJ_T0034765.1 MGP_WSBEiJ_G0019343.1 mouse_genomes_project 12 92112854 92123577 - protein_coding processed_transcript MGP_WSBEiJ_T0034766.1 MGP_WSBEiJ_G0019343.1 mouse_genomes_project 12 92123684 92191896 - MGP_WSBEiJ_P0034766 protein_coding protein_coding MGP_WSBEiJ_T0034767.1 MGP_WSBEiJ_G0019343.1 mouse_genomes_project 12 92145727 92183966 - protein_coding processed_transcript MGP_WSBEiJ_T0034768.1 MGP_WSBEiJ_G0019343.1 mouse_genomes_project 12 92155878 92158344 - MGP_WSBEiJ_P0034768 protein_coding protein_coding MGP_WSBEiJ_T0034769.1 MGP_WSBEiJ_G0019343.1 mouse_genomes_project 12 92198559 92201146 - protein_coding processed_transcript MGP_WSBEiJ_T0000024.1 MGP_WSBEiJ_G0000018.1 mouse_genomes_project 12 115206276 115206305 - MGP_WSBEiJ_P0000024 Gm37327 IG_D_gene IG_D_gene MGP_WSBEiJ_T0034618.1 MGP_WSBEiJ_G0019304.1 mouse_genomes_project 12 85429710 85471982 - MGP_WSBEiJ_P0034618 Tmed10 protein_coding protein_coding MGP_WSBEiJ_T0035238.1 MGP_WSBEiJ_G0019504.1 mouse_genomes_project 12 114470779 114479087 + MGP_WSBEiJ_P0035238 BC022687 protein_coding protein_coding MGP_WSBEiJ_T0035239.1 MGP_WSBEiJ_G0019504.1 mouse_genomes_project 12 114470779 114479628 + MGP_WSBEiJ_P0035239 BC022687 protein_coding protein_coding MGP_WSBEiJ_T0099023.1 MGP_WSBEiJ_G0037686.1 mouse_genomes_project 12 111135064 111135146 + Gm23347 snoRNA snoRNA MGP_WSBEiJ_T0034088.1 MGP_WSBEiJ_G0019119.1 mouse_genomes_project 12 60451221 60537019 + Lrfn5 protein_coding processed_transcript MGP_WSBEiJ_T0034089.1 MGP_WSBEiJ_G0019119.1 mouse_genomes_project 12 60451238 60601670 + Lrfn5 protein_coding processed_transcript MGP_WSBEiJ_T0034090.1 MGP_WSBEiJ_G0019119.1 mouse_genomes_project 12 60452011 60786613 + MGP_WSBEiJ_P0034090 Lrfn5 protein_coding protein_coding MGP_WSBEiJ_T0034091.1 MGP_WSBEiJ_G0019119.1 mouse_genomes_project 12 60452011 60772554 + MGP_WSBEiJ_P0034091 Lrfn5 protein_coding protein_coding MGP_WSBEiJ_T0034092.1 MGP_WSBEiJ_G0019119.1 mouse_genomes_project 12 60784952 60787027 + Lrfn5 protein_coding retained_intron MGP_WSBEiJ_T0035084.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110901303 110902263 + Dlk1 protein_coding retained_intron MGP_WSBEiJ_T0035085.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110901329 110911807 + MGP_WSBEiJ_P0035085 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0035086.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110901935 110909166 + MGP_WSBEiJ_P0035086 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0035087.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110901971 110908848 + MGP_WSBEiJ_P0035087 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0035088.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110901971 110909084 + MGP_WSBEiJ_P0035088 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0035089.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110902015 110911807 + MGP_WSBEiJ_P0035089 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0035090.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110902135 110911807 + MGP_WSBEiJ_P0035090 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0035091.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110902140 110908827 + MGP_WSBEiJ_P0035091 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0035092.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110902672 110908229 + MGP_WSBEiJ_P0035092 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0035093.1 MGP_WSBEiJ_G0019455.1 mouse_genomes_project 12 110908309 110908942 + MGP_WSBEiJ_P0035093 Dlk1 protein_coding protein_coding MGP_WSBEiJ_T0009705.1 MGP_WSBEiJ_G0007862.1 mouse_genomes_project 12 111174829 111174915 + Mir323 miRNA miRNA MGP_WSBEiJ_T0034003.1 MGP_WSBEiJ_G0019090.1 mouse_genomes_project 12 53866184 53915948 + MGP_WSBEiJ_P0034003 Srp54b protein_coding protein_coding MGP_WSBEiJ_T0034855.1 MGP_WSBEiJ_G0019367.1 mouse_genomes_project 12 102245684 102468624 + MGP_WSBEiJ_P0034855 Catsperb protein_coding protein_coding MGP_WSBEiJ_T0006394.1 MGP_WSBEiJ_G0005320.1 mouse_genomes_project 12 111157297 111164301 + B830012L14Rik lincRNA lincRNA MGP_WSBEiJ_T0098978.1 MGP_WSBEiJ_G0037641.1 mouse_genomes_project 12 34336293 34336403 - Gm25438 snoRNA snoRNA MGP_WSBEiJ_T0009683.1 MGP_WSBEiJ_G0007840.1 mouse_genomes_project 12 111041135 111041229 + Mir665 miRNA miRNA MGP_WSBEiJ_T0011133.1 MGP_WSBEiJ_G0009290.1 mouse_genomes_project 12 70213297 70213607 + Gm24857 misc_RNA misc_RNA MGP_WSBEiJ_T0000269.1 MGP_WSBEiJ_G0000217.1 mouse_genomes_project 12 118115685 118116118 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0035081.1 MGP_WSBEiJ_G0019454.1 mouse_genomes_project 12 110500000 110539045 - MGP_WSBEiJ_P0035081 Begain protein_coding protein_coding MGP_WSBEiJ_T0035082.1 MGP_WSBEiJ_G0019454.1 mouse_genomes_project 12 110502423 110504901 - Begain protein_coding retained_intron MGP_WSBEiJ_T0035083.1 MGP_WSBEiJ_G0019454.1 mouse_genomes_project 12 110505465 110523423 - Begain protein_coding processed_transcript MGP_WSBEiJ_T0000089.1 MGP_WSBEiJ_G0000069.1 mouse_genomes_project 12 116263766 116264200 - MGP_WSBEiJ_P0000089 Ighv12-3 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034133.1 MGP_WSBEiJ_G0019139.1 mouse_genomes_project 12 68488503 68494759 + Klhdc2 protein_coding retained_intron MGP_WSBEiJ_T0034134.1 MGP_WSBEiJ_G0019139.1 mouse_genomes_project 12 68488544 68505713 + MGP_WSBEiJ_P0034134 Klhdc2 protein_coding protein_coding MGP_WSBEiJ_T0034135.1 MGP_WSBEiJ_G0019139.1 mouse_genomes_project 12 68488577 68503694 + Klhdc2 protein_coding retained_intron MGP_WSBEiJ_T0034136.1 MGP_WSBEiJ_G0019139.1 mouse_genomes_project 12 68496042 68503722 + Klhdc2 protein_coding retained_intron MGP_WSBEiJ_T0033566.1 MGP_WSBEiJ_G0018924.1 mouse_genomes_project 12 1572898 1573423 - MGP_WSBEiJ_P0033566 Gm17541 protein_coding protein_coding MGP_WSBEiJ_T0100514.1 MGP_WSBEiJ_G0038972.1 mouse_genomes_project 12 104704208 104708669 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0033639.1 MGP_WSBEiJ_G0018955.1 mouse_genomes_project 12 8495929 8618299 - MGP_WSBEiJ_P0033639 Vsnl1 protein_coding protein_coding MGP_WSBEiJ_T0009648.1 MGP_WSBEiJ_G0007805.1 mouse_genomes_project 12 68336577 68336656 + miRNA miRNA MGP_WSBEiJ_T0000034.1 MGP_WSBEiJ_G0000028.1 mouse_genomes_project 12 115160798 115160846 - MGP_WSBEiJ_P0000034 Ighj3 IG_J_gene IG_J_gene MGP_WSBEiJ_T0034352.1 MGP_WSBEiJ_G0019217.1 mouse_genomes_project 12 78299598 78343498 + MGP_WSBEiJ_P0034352 Fam71d protein_coding protein_coding MGP_WSBEiJ_T0003351.1 MGP_WSBEiJ_G0003080.1 mouse_genomes_project 12 104247622 104258444 + Gm15523 antisense antisense MGP_WSBEiJ_T0034571.1 MGP_WSBEiJ_G0019290.1 mouse_genomes_project 12 84823165 84926903 - MGP_WSBEiJ_P0034571 Ltbp2 protein_coding protein_coding MGP_WSBEiJ_T0034572.1 MGP_WSBEiJ_G0019290.1 mouse_genomes_project 12 84823166 84926866 - MGP_WSBEiJ_P0034572 Ltbp2 protein_coding protein_coding MGP_WSBEiJ_T0034573.1 MGP_WSBEiJ_G0019290.1 mouse_genomes_project 12 84823282 84926850 - MGP_WSBEiJ_P0034573 Ltbp2 protein_coding protein_coding MGP_WSBEiJ_T0034574.1 MGP_WSBEiJ_G0019290.1 mouse_genomes_project 12 84825159 84831776 - MGP_WSBEiJ_P0034574 Ltbp2 protein_coding protein_coding MGP_WSBEiJ_T0034575.1 MGP_WSBEiJ_G0019290.1 mouse_genomes_project 12 84826314 84832904 - MGP_WSBEiJ_P0034575 Ltbp2 protein_coding protein_coding MGP_WSBEiJ_T0034576.1 MGP_WSBEiJ_G0019290.1 mouse_genomes_project 12 84831791 84839396 - MGP_WSBEiJ_P0034576 Ltbp2 protein_coding protein_coding MGP_WSBEiJ_T0034577.1 MGP_WSBEiJ_G0019290.1 mouse_genomes_project 12 84847648 84926862 - Ltbp2 protein_coding retained_intron MGP_WSBEiJ_T0000243.1 MGP_WSBEiJ_G0000191.1 mouse_genomes_project 12 116220239 116220672 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0098987.1 MGP_WSBEiJ_G0037650.1 mouse_genomes_project 12 54983501 54983631 - Gm25917 snoRNA snoRNA MGP_WSBEiJ_T0033760.1 MGP_WSBEiJ_G0019000.1 mouse_genomes_project 12 26397248 26457617 - MGP_WSBEiJ_P0033760 Trappc12 protein_coding protein_coding MGP_WSBEiJ_T0033761.1 MGP_WSBEiJ_G0019000.1 mouse_genomes_project 12 26397248 26457558 - MGP_WSBEiJ_P0033761 Trappc12 protein_coding protein_coding MGP_WSBEiJ_T0033762.1 MGP_WSBEiJ_G0019000.1 mouse_genomes_project 12 26416358 26457617 - MGP_WSBEiJ_P0033762 Trappc12 protein_coding protein_coding MGP_WSBEiJ_T0006348.1 MGP_WSBEiJ_G0005289.1 mouse_genomes_project 12 87592557 87595548 + Gm26764 lincRNA lincRNA MGP_WSBEiJ_T0000225.1 MGP_WSBEiJ_G0000173.1 mouse_genomes_project 12 115467728 115468643 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0033745.1 MGP_WSBEiJ_G0018991.1 mouse_genomes_project 12 24048749 24062345 - MGP_WSBEiJ_P0033745 Rsad2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033746.1 MGP_WSBEiJ_G0018991.1 mouse_genomes_project 12 24048749 24062366 - MGP_WSBEiJ_P0033746 Rsad2 protein_coding protein_coding MGP_WSBEiJ_T0033747.1 MGP_WSBEiJ_G0018991.1 mouse_genomes_project 12 24056643 24060795 - Rsad2 protein_coding processed_transcript MGP_WSBEiJ_T0009681.1 MGP_WSBEiJ_G0007838.1 mouse_genomes_project 12 111040634 111040695 - Mir3544 miRNA miRNA MGP_WSBEiJ_T0009666.1 MGP_WSBEiJ_G0007823.1 mouse_genomes_project 12 92204366 92204435 - Gm22015 miRNA miRNA MGP_WSBEiJ_T0003334.1 MGP_WSBEiJ_G0003065.1 mouse_genomes_project 12 80431728 80440641 - Plekhd1os antisense antisense MGP_WSBEiJ_T0034028.1 MGP_WSBEiJ_G0019104.1 mouse_genomes_project 12 55451015 55474310 + MGP_WSBEiJ_P0034028 Pax9 protein_coding protein_coding MGP_WSBEiJ_T0034029.1 MGP_WSBEiJ_G0019104.1 mouse_genomes_project 12 55454892 55474425 + MGP_WSBEiJ_P0034029 Pax9 protein_coding protein_coding MGP_WSBEiJ_T0034030.1 MGP_WSBEiJ_G0019104.1 mouse_genomes_project 12 55454982 55471173 + Pax9 protein_coding retained_intron MGP_WSBEiJ_T0034624.1 MGP_WSBEiJ_G0019307.1 mouse_genomes_project 12 85700729 85744340 + MGP_WSBEiJ_P0034624 Jdp2 protein_coding protein_coding MGP_WSBEiJ_T0034625.1 MGP_WSBEiJ_G0019307.1 mouse_genomes_project 12 85701040 85744339 + MGP_WSBEiJ_P0034625 Jdp2 protein_coding protein_coding MGP_WSBEiJ_T0034626.1 MGP_WSBEiJ_G0019307.1 mouse_genomes_project 12 85701642 85744340 + MGP_WSBEiJ_P0034626 Jdp2 protein_coding protein_coding MGP_WSBEiJ_T0006360.1 MGP_WSBEiJ_G0005301.1 mouse_genomes_project 12 106531639 106585785 + lincRNA lincRNA MGP_WSBEiJ_T0006361.1 MGP_WSBEiJ_G0005301.1 mouse_genomes_project 12 106532038 106585783 + lincRNA lincRNA MGP_WSBEiJ_T0099033.1 MGP_WSBEiJ_G0037696.1 mouse_genomes_project 12 113121163 113121290 + Snora28 snoRNA snoRNA MGP_WSBEiJ_T0034050.1 MGP_WSBEiJ_G0019110.1 mouse_genomes_project 12 57063363 57065482 + MGP_WSBEiJ_P0034050 Sstr1 protein_coding protein_coding MGP_WSBEiJ_T0034051.1 MGP_WSBEiJ_G0019110.1 mouse_genomes_project 12 57063395 57066035 + MGP_WSBEiJ_P0034051 Sstr1 protein_coding protein_coding MGP_WSBEiJ_T0034439.1 MGP_WSBEiJ_G0019254.1 mouse_genomes_project 12 82334641 82338184 - MGP_WSBEiJ_P0034439 Gm5435 protein_coding protein_coding MGP_WSBEiJ_T0033863.1 MGP_WSBEiJ_G0019033.1 mouse_genomes_project 12 32764012 32765067 - MGP_WSBEiJ_P0033863 protein_coding protein_coding MGP_WSBEiJ_T0034322.1 MGP_WSBEiJ_G0019207.1 mouse_genomes_project 12 76069170 76118264 + MGP_WSBEiJ_P0034322 Plekhg3 protein_coding protein_coding MGP_WSBEiJ_T0034323.1 MGP_WSBEiJ_G0019207.1 mouse_genomes_project 12 76085243 76116340 + MGP_WSBEiJ_P0034323 Plekhg3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0100517.1 MGP_WSBEiJ_G0038975.1 mouse_genomes_project 12 104779467 104830648 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0034345.1 MGP_WSBEiJ_G0019214.1 mouse_genomes_project 12 76805791 77042758 + MGP_WSBEiJ_P0034345 Fut8 protein_coding protein_coding MGP_WSBEiJ_T0034346.1 MGP_WSBEiJ_G0019214.1 mouse_genomes_project 12 76805791 77042758 + MGP_WSBEiJ_P0034346 Fut8 protein_coding protein_coding MGP_WSBEiJ_T0034347.1 MGP_WSBEiJ_G0019214.1 mouse_genomes_project 12 76806752 77043100 + MGP_WSBEiJ_P0034347 Fut8 protein_coding protein_coding MGP_WSBEiJ_T0034047.1 MGP_WSBEiJ_G0019109.1 mouse_genomes_project 12 56394484 56453364 + MGP_WSBEiJ_P0034047 protein_coding protein_coding MGP_WSBEiJ_T0034048.1 MGP_WSBEiJ_G0019109.1 mouse_genomes_project 12 56406175 56579467 + MGP_WSBEiJ_P0034048 protein_coding protein_coding MGP_WSBEiJ_T0034049.1 MGP_WSBEiJ_G0019109.1 mouse_genomes_project 12 56480686 56483246 + MGP_WSBEiJ_P0034049 protein_coding protein_coding MGP_WSBEiJ_T0000065.1 MGP_WSBEiJ_G0000053.1 mouse_genomes_project 12 115645338 115645777 - MGP_WSBEiJ_P0000065 Ighv2-7 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000113.1 MGP_WSBEiJ_G0000086.1 mouse_genomes_project 12 117033948 117034247 - MGP_WSBEiJ_P0000113 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000117.1 MGP_WSBEiJ_G0000086.1 mouse_genomes_project 12 117033952 117034247 - MGP_WSBEiJ_P0000117 IG_V_gene IG_V_gene MGP_WSBEiJ_T0009668.1 MGP_WSBEiJ_G0007825.1 mouse_genomes_project 12 101792195 101792291 - Mir1190 miRNA miRNA MGP_WSBEiJ_T0098967.1 MGP_WSBEiJ_G0037630.1 mouse_genomes_project 12 10405763 10405898 - Gm24208 snoRNA snoRNA MGP_WSBEiJ_T0034020.1 MGP_WSBEiJ_G0019099.1 mouse_genomes_project 12 54318150 54540372 - MGP_WSBEiJ_P0034020 Ralgapa1 protein_coding protein_coding MGP_WSBEiJ_T0034021.1 MGP_WSBEiJ_G0019099.1 mouse_genomes_project 12 54318150 54540372 - MGP_WSBEiJ_P0034021 Ralgapa1 protein_coding protein_coding MGP_WSBEiJ_T0034022.1 MGP_WSBEiJ_G0019099.1 mouse_genomes_project 12 54324844 54539972 - MGP_WSBEiJ_P0034022 Ralgapa1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033790.1 MGP_WSBEiJ_G0019011.1 mouse_genomes_project 12 29047900 29051465 + Lamb1 protein_coding retained_intron MGP_WSBEiJ_T0033791.1 MGP_WSBEiJ_G0019011.1 mouse_genomes_project 12 29047903 29049399 + MGP_WSBEiJ_P0033791 Lamb1 protein_coding protein_coding MGP_WSBEiJ_T0033792.1 MGP_WSBEiJ_G0019011.1 mouse_genomes_project 12 29048006 29114085 + MGP_WSBEiJ_P0033792 Lamb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033793.1 MGP_WSBEiJ_G0019011.1 mouse_genomes_project 12 29048027 29114003 + MGP_WSBEiJ_P0033793 Lamb1 protein_coding protein_coding MGP_WSBEiJ_T0033794.1 MGP_WSBEiJ_G0019011.1 mouse_genomes_project 12 29059883 29071258 + Lamb1 protein_coding retained_intron MGP_WSBEiJ_T0033795.1 MGP_WSBEiJ_G0019011.1 mouse_genomes_project 12 29061402 29062167 + Lamb1 protein_coding retained_intron MGP_WSBEiJ_T0033796.1 MGP_WSBEiJ_G0019011.1 mouse_genomes_project 12 29108024 29108958 + Lamb1 protein_coding retained_intron MGP_WSBEiJ_T0035095.1 MGP_WSBEiJ_G0019457.1 mouse_genomes_project 12 111764959 111766989 + MGP_WSBEiJ_P0035095 protein_coding protein_coding MGP_WSBEiJ_T0035096.1 MGP_WSBEiJ_G0019457.1 mouse_genomes_project 12 111765151 111766600 + MGP_WSBEiJ_P0035096 protein_coding protein_coding MGP_WSBEiJ_T0033982.1 MGP_WSBEiJ_G0019082.1 mouse_genomes_project 12 52714026 52741833 - MGP_WSBEiJ_P0033982 Egln3 protein_coding protein_coding MGP_WSBEiJ_T0009688.1 MGP_WSBEiJ_G0007845.1 mouse_genomes_project 12 111047508 111047578 + Mir127 miRNA miRNA MGP_WSBEiJ_T0034058.1 MGP_WSBEiJ_G0019113.1 mouse_genomes_project 12 57886910 57901915 + MGP_WSBEiJ_P0034058 Gemin2 protein_coding protein_coding MGP_WSBEiJ_T0034059.1 MGP_WSBEiJ_G0019113.1 mouse_genomes_project 12 57886971 57901844 + Gemin2 protein_coding retained_intron MGP_WSBEiJ_T0034060.1 MGP_WSBEiJ_G0019113.1 mouse_genomes_project 12 57898112 57901332 + Gemin2 protein_coding retained_intron MGP_WSBEiJ_T0034993.1 MGP_WSBEiJ_G0019423.1 mouse_genomes_project 12 105889615 105999162 - MGP_WSBEiJ_P0034993 Clmn protein_coding protein_coding MGP_WSBEiJ_T0034994.1 MGP_WSBEiJ_G0019423.1 mouse_genomes_project 12 105889615 105999162 - MGP_WSBEiJ_P0034994 Clmn protein_coding protein_coding MGP_WSBEiJ_T0034899.1 MGP_WSBEiJ_G0019383.1 mouse_genomes_project 12 103642381 103647869 - MGP_WSBEiJ_P0034899 AK010878 protein_coding protein_coding MGP_WSBEiJ_T0034900.1 MGP_WSBEiJ_G0019383.1 mouse_genomes_project 12 103646351 103647872 - MGP_WSBEiJ_P0034900 AK010878 protein_coding protein_coding MGP_WSBEiJ_T0097774.1 MGP_WSBEiJ_G0036437.1 mouse_genomes_project 12 69938216 69938317 + Gm24474 snRNA snRNA MGP_WSBEiJ_T0034883.1 MGP_WSBEiJ_G0019375.1 mouse_genomes_project 12 103270065 103296061 - MGP_WSBEiJ_P0034883 Lgmn protein_coding protein_coding MGP_WSBEiJ_T0034884.1 MGP_WSBEiJ_G0019375.1 mouse_genomes_project 12 103270079 103309475 - MGP_WSBEiJ_P0034884 Lgmn protein_coding protein_coding MGP_WSBEiJ_T0034885.1 MGP_WSBEiJ_G0019375.1 mouse_genomes_project 12 103276094 103284975 - Lgmn protein_coding retained_intron MGP_WSBEiJ_T0034616.1 MGP_WSBEiJ_G0019302.1 mouse_genomes_project 12 85366917 85377696 + MGP_WSBEiJ_P0034616 Zc2hc1c protein_coding protein_coding MGP_WSBEiJ_T0099031.1 MGP_WSBEiJ_G0037694.1 mouse_genomes_project 12 111149761 111149832 + Gm22205 snoRNA snoRNA MGP_WSBEiJ_T0033586.1 MGP_WSBEiJ_G0018934.1 mouse_genomes_project 12 1975707 2281203 - MGP_WSBEiJ_P0033586 Klhl29 protein_coding protein_coding MGP_WSBEiJ_T0012548.1 MGP_WSBEiJ_G0010678.1 mouse_genomes_project 12 81389300 81389736 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034433.1 MGP_WSBEiJ_G0019251.1 mouse_genomes_project 12 81520694 81591003 - MGP_WSBEiJ_P0034433 Map3k9 protein_coding protein_coding MGP_WSBEiJ_T0034434.1 MGP_WSBEiJ_G0019251.1 mouse_genomes_project 12 81527763 81590707 - MGP_WSBEiJ_P0034434 Map3k9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012546.1 MGP_WSBEiJ_G0010676.1 mouse_genomes_project 12 79799599 79800494 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012559.1 MGP_WSBEiJ_G0010689.1 mouse_genomes_project 12 101974138 101974931 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003336.1 MGP_WSBEiJ_G0003067.1 mouse_genomes_project 12 81288598 81300256 + antisense antisense MGP_WSBEiJ_T0000244.1 MGP_WSBEiJ_G0000192.1 mouse_genomes_project 12 116231977 116232268 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034782.1 MGP_WSBEiJ_G0019346.1 mouse_genomes_project 12 98815933 98878843 - MGP_WSBEiJ_P0034782 Galc protein_coding unknown_likely_coding MGP_WSBEiJ_T0034783.1 MGP_WSBEiJ_G0019346.1 mouse_genomes_project 12 98815940 98879021 - MGP_WSBEiJ_P0034783 Galc protein_coding protein_coding MGP_WSBEiJ_T0034780.1 MGP_WSBEiJ_G0019345.1 mouse_genomes_project 12 96245693 96341337 + MGP_WSBEiJ_P0034780 Flrt2 protein_coding protein_coding MGP_WSBEiJ_T0034781.1 MGP_WSBEiJ_G0019345.1 mouse_genomes_project 12 96248820 96337229 + MGP_WSBEiJ_P0034781 Flrt2 protein_coding protein_coding MGP_WSBEiJ_T0011134.1 MGP_WSBEiJ_G0009291.1 mouse_genomes_project 12 71030297 71030599 + Gm22959 misc_RNA misc_RNA MGP_WSBEiJ_T0009734.1 MGP_WSBEiJ_G0007891.1 mouse_genomes_project 12 111202839 111202907 + Mir377 miRNA miRNA MGP_WSBEiJ_T0000132.1 MGP_WSBEiJ_G0000099.1 mouse_genomes_project 12 118083422 118083881 - MGP_WSBEiJ_P0000132 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034537.1 MGP_WSBEiJ_G0019277.1 mouse_genomes_project 12 84352301 84368800 - MGP_WSBEiJ_P0034537 Fam161b protein_coding protein_coding MGP_WSBEiJ_T0034538.1 MGP_WSBEiJ_G0019277.1 mouse_genomes_project 12 84352307 84368788 - MGP_WSBEiJ_P0034538 Fam161b protein_coding protein_coding MGP_WSBEiJ_T0034539.1 MGP_WSBEiJ_G0019277.1 mouse_genomes_project 12 84353481 84368759 - Fam161b protein_coding retained_intron MGP_WSBEiJ_T0034540.1 MGP_WSBEiJ_G0019277.1 mouse_genomes_project 12 84355364 84361838 - Fam161b protein_coding retained_intron MGP_WSBEiJ_T0034265.1 MGP_WSBEiJ_G0019185.1 mouse_genomes_project 12 72975476 73177464 + MGP_WSBEiJ_P0034265 Prkch protein_coding protein_coding MGP_WSBEiJ_T0034266.1 MGP_WSBEiJ_G0019185.1 mouse_genomes_project 12 72975522 73159552 + MGP_WSBEiJ_P0034266 Prkch protein_coding protein_coding MGP_WSBEiJ_T0034934.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104347194 104354315 + MGP_WSBEiJ_P0034934 Ifi27 protein_coding protein_coding MGP_WSBEiJ_T0034935.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104347194 104354315 + MGP_WSBEiJ_P0034935 Ifi27 protein_coding protein_coding MGP_WSBEiJ_T0034936.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104347194 104354315 + MGP_WSBEiJ_P0034936 Ifi27 protein_coding protein_coding MGP_WSBEiJ_T0034937.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104347195 104354347 + MGP_WSBEiJ_P0034937 Ifi27 protein_coding protein_coding MGP_WSBEiJ_T0034938.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104347228 104351744 + Ifi27 protein_coding retained_intron MGP_WSBEiJ_T0034939.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104347242 104354347 + MGP_WSBEiJ_P0034939 Ifi27 protein_coding protein_coding MGP_WSBEiJ_T0034940.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104347268 104351081 + Ifi27 protein_coding retained_intron MGP_WSBEiJ_T0034941.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104347275 104351636 + MGP_WSBEiJ_P0034941 Ifi27 protein_coding protein_coding MGP_WSBEiJ_T0034942.1 MGP_WSBEiJ_G0019394.1 mouse_genomes_project 12 104351734 104354347 + Ifi27 protein_coding retained_intron MGP_WSBEiJ_T0097755.1 MGP_WSBEiJ_G0036418.1 mouse_genomes_project 12 30847933 30848034 - Gm24922 snRNA snRNA MGP_WSBEiJ_T0097782.1 MGP_WSBEiJ_G0036445.1 mouse_genomes_project 12 94191987 94192148 + Gm23249 snRNA snRNA MGP_WSBEiJ_T0033877.1 MGP_WSBEiJ_G0019040.1 mouse_genomes_project 12 34045836 34113859 - MGP_WSBEiJ_P0033877 Bzw2 protein_coding protein_coding MGP_WSBEiJ_T0034435.1 MGP_WSBEiJ_G0019252.1 mouse_genomes_project 12 81677241 81827683 + MGP_WSBEiJ_P0034435 Pcnx protein_coding protein_coding MGP_WSBEiJ_T0034436.1 MGP_WSBEiJ_G0019252.1 mouse_genomes_project 12 81677586 81827685 + MGP_WSBEiJ_P0034436 Pcnx protein_coding unknown_likely_coding MGP_WSBEiJ_T0000025.1 MGP_WSBEiJ_G0000019.1 mouse_genomes_project 12 115211565 115211594 - MGP_WSBEiJ_P0000025 Ighd5-8 IG_D_gene IG_D_gene MGP_WSBEiJ_T0034798.1 MGP_WSBEiJ_G0019352.1 mouse_genomes_project 12 99426833 99545626 - MGP_WSBEiJ_P0034798 Eml5 protein_coding protein_coding MGP_WSBEiJ_T0034799.1 MGP_WSBEiJ_G0019352.1 mouse_genomes_project 12 99435572 99545170 - MGP_WSBEiJ_P0034799 Eml5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035067.1 MGP_WSBEiJ_G0019449.1 mouse_genomes_project 12 110242956 110269311 + MGP_WSBEiJ_P0035067 Yy1 protein_coding protein_coding MGP_WSBEiJ_T0035068.1 MGP_WSBEiJ_G0019449.1 mouse_genomes_project 12 110258937 110268243 + Yy1 protein_coding retained_intron MGP_WSBEiJ_T0009672.1 MGP_WSBEiJ_G0007829.1 mouse_genomes_project 12 107094422 107094492 - Gm22120 miRNA miRNA MGP_WSBEiJ_T0011142.1 MGP_WSBEiJ_G0009299.1 mouse_genomes_project 12 110990802 110990885 + Gm27596 misc_RNA misc_RNA MGP_WSBEiJ_T0034746.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91402712 91778190 - MGP_WSBEiJ_P0034746 Cep128 protein_coding protein_coding MGP_WSBEiJ_T0034747.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91402712 91657994 - MGP_WSBEiJ_P0034747 Cep128 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034748.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91403560 91459991 - Cep128 protein_coding processed_transcript MGP_WSBEiJ_T0034749.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91403562 91434823 - Cep128 protein_coding processed_transcript MGP_WSBEiJ_T0034750.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91403562 91434823 - Cep128 protein_coding processed_transcript MGP_WSBEiJ_T0034751.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91403785 91578150 - Cep128 protein_coding processed_transcript MGP_WSBEiJ_T0034752.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91425606 91578203 - Cep128 protein_coding processed_transcript MGP_WSBEiJ_T0034753.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91612346 91651095 - MGP_WSBEiJ_P0034753 Cep128 protein_coding protein_coding MGP_WSBEiJ_T0034754.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91680347 91778190 - Cep128 protein_coding retained_intron MGP_WSBEiJ_T0034755.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91711100 91726327 - Cep128 protein_coding processed_transcript MGP_WSBEiJ_T0034756.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91731296 91778140 - Cep128 protein_coding retained_intron MGP_WSBEiJ_T0034757.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91733119 91778190 - Cep128 protein_coding processed_transcript MGP_WSBEiJ_T0034758.1 MGP_WSBEiJ_G0019340.1 mouse_genomes_project 12 91756132 91778134 - Cep128 protein_coding retained_intron MGP_WSBEiJ_T0006340.1 MGP_WSBEiJ_G0005281.1 mouse_genomes_project 12 80511431 80514293 + Gm26796 lincRNA lincRNA MGP_WSBEiJ_T0035036.1 MGP_WSBEiJ_G0019438.1 mouse_genomes_project 12 107260748 107330314 + MGP_WSBEiJ_P0035036 Vrk1 protein_coding protein_coding MGP_WSBEiJ_T0035037.1 MGP_WSBEiJ_G0019438.1 mouse_genomes_project 12 107260748 107330314 + MGP_WSBEiJ_P0035037 Vrk1 protein_coding protein_coding MGP_WSBEiJ_T0035038.1 MGP_WSBEiJ_G0019438.1 mouse_genomes_project 12 107260748 107330314 + MGP_WSBEiJ_P0035038 Vrk1 protein_coding protein_coding MGP_WSBEiJ_T0012529.1 MGP_WSBEiJ_G0010659.1 mouse_genomes_project 12 53543924 53545881 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033694.1 MGP_WSBEiJ_G0018974.1 mouse_genomes_project 12 14947585 14953948 + MGP_WSBEiJ_P0033694 Odc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033695.1 MGP_WSBEiJ_G0018974.1 mouse_genomes_project 12 14947615 14955723 + MGP_WSBEiJ_P0033695 Odc1 protein_coding protein_coding MGP_WSBEiJ_T0033526.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 630642 666702 + Dnmt3a protein_coding retained_intron MGP_WSBEiJ_T0033527.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 631333 697434 + Dnmt3a protein_coding retained_intron MGP_WSBEiJ_T0033528.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 631362 703329 + MGP_WSBEiJ_P0033528 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033529.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 633047 740195 + MGP_WSBEiJ_P0033529 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033530.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 633060 727894 + MGP_WSBEiJ_P0033530 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033531.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 679653 740335 + MGP_WSBEiJ_P0033531 Dnmt3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033532.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 691031 696179 + MGP_WSBEiJ_P0033532 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033533.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 696207 706014 + MGP_WSBEiJ_P0033533 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033534.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 715401 727020 + MGP_WSBEiJ_P0033534 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033535.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 722626 740290 + MGP_WSBEiJ_P0033535 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033536.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 725722 726575 + MGP_WSBEiJ_P0033536 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033537.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 725767 727875 + MGP_WSBEiJ_P0033537 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033538.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 726491 728264 + MGP_WSBEiJ_P0033538 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033539.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 728318 730524 + Dnmt3a protein_coding retained_intron MGP_WSBEiJ_T0033540.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 731119 739240 + MGP_WSBEiJ_P0033540 Dnmt3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033541.1 MGP_WSBEiJ_G0018914.1 mouse_genomes_project 12 739263 740995 + MGP_WSBEiJ_P0033541 Dnmt3a protein_coding protein_coding MGP_WSBEiJ_T0033834.1 MGP_WSBEiJ_G0019023.1 mouse_genomes_project 12 30213628 30217864 + MGP_WSBEiJ_P0033834 Ccdc71l protein_coding protein_coding MGP_WSBEiJ_T0035212.1 MGP_WSBEiJ_G0019493.1 mouse_genomes_project 12 114050187 114061234 - MGP_WSBEiJ_P0035212 A730018C14Rik protein_coding protein_coding MGP_WSBEiJ_T0035194.1 MGP_WSBEiJ_G0019486.1 mouse_genomes_project 12 113419275 113435255 + MGP_WSBEiJ_P0035194 Zfyve21 protein_coding protein_coding MGP_WSBEiJ_T0035121.1 MGP_WSBEiJ_G0019463.1 mouse_genomes_project 12 112314962 112334315 + MGP_WSBEiJ_P0035121 protein_coding protein_coding MGP_WSBEiJ_T0009675.1 MGP_WSBEiJ_G0007832.1 mouse_genomes_project 12 110291801 110291897 + Mir345 miRNA miRNA MGP_WSBEiJ_T0034502.1 MGP_WSBEiJ_G0019263.1 mouse_genomes_project 12 83890997 83893343 + MGP_WSBEiJ_P0034502 2410016O06Rik protein_coding protein_coding MGP_WSBEiJ_T0035094.1 MGP_WSBEiJ_G0019456.1 mouse_genomes_project 12 111044021 111056107 - MGP_WSBEiJ_P0035094 Rtl1 protein_coding protein_coding MGP_WSBEiJ_T0016709.1 MGP_WSBEiJ_G0014651.1 mouse_genomes_project 12 92081770 92093171 - Gm8378 processed_transcript processed_transcript MGP_WSBEiJ_T0016710.1 MGP_WSBEiJ_G0014651.1 mouse_genomes_project 12 92089683 92093212 - Gm8378 processed_transcript processed_transcript MGP_WSBEiJ_T0016711.1 MGP_WSBEiJ_G0014651.1 mouse_genomes_project 12 92091568 92093212 - Gm8378 processed_transcript processed_transcript MGP_WSBEiJ_T0035144.1 MGP_WSBEiJ_G0019472.1 mouse_genomes_project 12 112847036 112852395 + MGP_WSBEiJ_P0035144 Amn protein_coding protein_coding MGP_WSBEiJ_T0096940.1 MGP_WSBEiJ_G0035621.1 mouse_genomes_project 12 97982930 97983010 - Gm23558 rRNA rRNA MGP_WSBEiJ_T0096942.1 MGP_WSBEiJ_G0035623.1 mouse_genomes_project 12 106857809 106857938 + Gm22790 rRNA rRNA MGP_WSBEiJ_T0034967.1 MGP_WSBEiJ_G0019406.1 mouse_genomes_project 12 104931030 104945517 - MGP_WSBEiJ_P0034967 Serpina11 protein_coding protein_coding MGP_WSBEiJ_T0034968.1 MGP_WSBEiJ_G0019406.1 mouse_genomes_project 12 104931042 104945487 - MGP_WSBEiJ_P0034968 Serpina11 protein_coding protein_coding MGP_WSBEiJ_T0034969.1 MGP_WSBEiJ_G0019406.1 mouse_genomes_project 12 104935465 104945479 - MGP_WSBEiJ_P0034969 Serpina11 protein_coding protein_coding MGP_WSBEiJ_T0034970.1 MGP_WSBEiJ_G0019406.1 mouse_genomes_project 12 104935551 104945477 - MGP_WSBEiJ_P0034970 Serpina11 protein_coding protein_coding MGP_WSBEiJ_T0034971.1 MGP_WSBEiJ_G0019406.1 mouse_genomes_project 12 104936690 104945501 - Serpina11 protein_coding processed_transcript MGP_WSBEiJ_T0009647.1 MGP_WSBEiJ_G0007804.1 mouse_genomes_project 12 58113009 58113079 - Gm27284 miRNA miRNA MGP_WSBEiJ_T0033999.1 MGP_WSBEiJ_G0019088.1 mouse_genomes_project 12 53567882 53568254 - MGP_WSBEiJ_P0033999 Gm20403 protein_coding protein_coding MGP_WSBEiJ_T0034201.1 MGP_WSBEiJ_G0019161.1 mouse_genomes_project 12 70396950 70410475 + MGP_WSBEiJ_P0034201 Tomm20l protein_coding protein_coding MGP_WSBEiJ_T0034601.1 MGP_WSBEiJ_G0019298.1 mouse_genomes_project 12 85231544 85241828 - MGP_WSBEiJ_P0034601 Pgf protein_coding protein_coding MGP_WSBEiJ_T0097762.1 MGP_WSBEiJ_G0036425.1 mouse_genomes_project 12 52778698 52778844 - Gm24692 snRNA snRNA MGP_WSBEiJ_T0099021.1 MGP_WSBEiJ_G0037684.1 mouse_genomes_project 12 111114422 111114494 + Gm25357 snoRNA snoRNA MGP_WSBEiJ_T0006375.1 MGP_WSBEiJ_G0005312.1 mouse_genomes_project 12 109090249 109103793 - 4930465M20Rik lincRNA lincRNA MGP_WSBEiJ_T0006376.1 MGP_WSBEiJ_G0005312.1 mouse_genomes_project 12 109096829 109103801 - 4930465M20Rik lincRNA lincRNA MGP_WSBEiJ_T0035218.1 MGP_WSBEiJ_G0019498.1 mouse_genomes_project 12 114295940 114300275 + MGP_WSBEiJ_P0035218 Siva1 protein_coding protein_coding MGP_WSBEiJ_T0035219.1 MGP_WSBEiJ_G0019498.1 mouse_genomes_project 12 114295940 114300275 + MGP_WSBEiJ_P0035219 Siva1 protein_coding protein_coding MGP_WSBEiJ_T0035213.1 MGP_WSBEiJ_G0019494.1 mouse_genomes_project 12 114132239 114139044 + MGP_WSBEiJ_P0035213 A530016L24Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0034627.1 MGP_WSBEiJ_G0019308.1 mouse_genomes_project 12 85798571 85821504 + MGP_WSBEiJ_P0034627 Batf protein_coding protein_coding MGP_WSBEiJ_T0009649.1 MGP_WSBEiJ_G0007806.1 mouse_genomes_project 12 68558269 68558349 - miRNA miRNA MGP_WSBEiJ_T0034695.1 MGP_WSBEiJ_G0019327.1 mouse_genomes_project 12 87454421 87463810 + Samd15 protein_coding retained_intron MGP_WSBEiJ_T0034696.1 MGP_WSBEiJ_G0019327.1 mouse_genomes_project 12 87454465 87463488 + Samd15 protein_coding processed_transcript MGP_WSBEiJ_T0034697.1 MGP_WSBEiJ_G0019327.1 mouse_genomes_project 12 87455253 87469094 + MGP_WSBEiJ_P0034697 Samd15 protein_coding protein_coding MGP_WSBEiJ_T0034698.1 MGP_WSBEiJ_G0019327.1 mouse_genomes_project 12 87455460 87456654 + MGP_WSBEiJ_P0034698 Samd15 protein_coding protein_coding MGP_WSBEiJ_T0034943.1 MGP_WSBEiJ_G0019395.1 mouse_genomes_project 12 104356274 104357788 - MGP_WSBEiJ_P0034943 Ifi27l2a protein_coding protein_coding MGP_WSBEiJ_T0099004.1 MGP_WSBEiJ_G0037667.1 mouse_genomes_project 12 91219928 91220057 + Gm23195 snoRNA snoRNA MGP_WSBEiJ_T0000037.1 MGP_WSBEiJ_G0000030.1 mouse_genomes_project 12 115161494 115161547 - MGP_WSBEiJ_P0000037 Ighj1 IG_J_gene IG_J_gene MGP_WSBEiJ_T0098973.1 MGP_WSBEiJ_G0037636.1 mouse_genomes_project 12 26023083 26023215 + Gm25564 snoRNA snoRNA MGP_WSBEiJ_T0009735.1 MGP_WSBEiJ_G0007892.1 mouse_genomes_project 12 111204739 111204829 + Mir541 miRNA miRNA MGP_WSBEiJ_T0006373.1 MGP_WSBEiJ_G0005310.1 mouse_genomes_project 12 108474809 108489251 - Gm16084 lincRNA lincRNA MGP_WSBEiJ_T0006357.1 MGP_WSBEiJ_G0005298.1 mouse_genomes_project 12 101853563 101862019 + D130020L05Rik lincRNA lincRNA MGP_WSBEiJ_T0006351.1 MGP_WSBEiJ_G0005292.1 mouse_genomes_project 12 91151250 91370342 - 4930544I03Rik lincRNA lincRNA MGP_WSBEiJ_T0016738.1 MGP_WSBEiJ_G0014659.1 mouse_genomes_project 12 118211121 118245833 - Gm20658 processed_transcript processed_transcript MGP_WSBEiJ_T0016739.1 MGP_WSBEiJ_G0014659.1 mouse_genomes_project 12 118211144 118245948 - Gm20658 processed_transcript processed_transcript MGP_WSBEiJ_T0034094.1 MGP_WSBEiJ_G0019121.1 mouse_genomes_project 12 63427323 63430889 - MGP_WSBEiJ_P0034094 Fscb protein_coding protein_coding MGP_WSBEiJ_T0006408.1 MGP_WSBEiJ_G0005323.1 mouse_genomes_project 12 112391236 112394168 - Gm26912 lincRNA lincRNA MGP_WSBEiJ_T0033668.1 MGP_WSBEiJ_G0018967.1 mouse_genomes_project 12 14256411 14358866 + MGP_WSBEiJ_P0033668 Rock2 protein_coding protein_coding MGP_WSBEiJ_T0003340.1 MGP_WSBEiJ_G0003071.1 mouse_genomes_project 12 83540292 83544298 - antisense antisense MGP_WSBEiJ_T0009714.1 MGP_WSBEiJ_G0007871.1 mouse_genomes_project 12 111182333 111182425 + Mir667 miRNA miRNA MGP_WSBEiJ_T0009721.1 MGP_WSBEiJ_G0007878.1 mouse_genomes_project 12 111189137 111189212 + Mir381 miRNA miRNA MGP_WSBEiJ_T0012568.1 MGP_WSBEiJ_G0010698.1 mouse_genomes_project 12 108193255 108193733 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035280.1 MGP_WSBEiJ_G0019518.1 mouse_genomes_project 12 114867111 114870663 + MGP_WSBEiJ_P0035280 Tmem121 protein_coding protein_coding MGP_WSBEiJ_T0034102.1 MGP_WSBEiJ_G0019127.1 mouse_genomes_project 12 64071803 64130714 + MGP_WSBEiJ_P0034102 Fancm protein_coding protein_coding MGP_WSBEiJ_T0000070.1 MGP_WSBEiJ_G0000057.1 mouse_genomes_project 12 115723714 115724227 - MGP_WSBEiJ_P0000070 Ighv7-1 IG_V_gene IG_V_gene MGP_WSBEiJ_T0009684.1 MGP_WSBEiJ_G0007841.1 mouse_genomes_project 12 111042772 111042861 + Mir3070a miRNA miRNA MGP_WSBEiJ_T0034560.1 MGP_WSBEiJ_G0019282.1 mouse_genomes_project 12 84443823 84464482 - MGP_WSBEiJ_P0034560 Aldh6a1 protein_coding protein_coding MGP_WSBEiJ_T0033874.1 MGP_WSBEiJ_G0019039.1 mouse_genomes_project 12 33952942 33987472 - MGP_WSBEiJ_P0033874 Tspan13 protein_coding protein_coding MGP_WSBEiJ_T0033875.1 MGP_WSBEiJ_G0019039.1 mouse_genomes_project 12 33961039 33987483 - MGP_WSBEiJ_P0033875 Tspan13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033876.1 MGP_WSBEiJ_G0019039.1 mouse_genomes_project 12 33961050 33984917 - MGP_WSBEiJ_P0033876 Tspan13 protein_coding protein_coding MGP_WSBEiJ_T0097788.1 MGP_WSBEiJ_G0036451.1 mouse_genomes_project 12 118596872 118596976 - Gm25112 snRNA snRNA MGP_WSBEiJ_T0097790.1 MGP_WSBEiJ_G0036453.1 mouse_genomes_project 12 120697808 120697915 - Gm25577 snRNA snRNA MGP_WSBEiJ_T0034986.1 MGP_WSBEiJ_G0019417.1 mouse_genomes_project 12 105404334 105496080 + MGP_WSBEiJ_P0034986 Serpina3k protein_coding protein_coding MGP_WSBEiJ_T0011138.1 MGP_WSBEiJ_G0009295.1 mouse_genomes_project 12 91384732 91385055 + Gm26477 misc_RNA misc_RNA MGP_WSBEiJ_T0009713.1 MGP_WSBEiJ_G0007870.1 mouse_genomes_project 12 111181081 111181144 + Mir495 miRNA miRNA MGP_WSBEiJ_T0034727.1 MGP_WSBEiJ_G0019335.1 mouse_genomes_project 12 87717551 87740758 - MGP_WSBEiJ_P0034727 Snw1 protein_coding protein_coding MGP_WSBEiJ_T0034307.1 MGP_WSBEiJ_G0019199.1 mouse_genomes_project 12 75710555 75761034 - MGP_WSBEiJ_P0034307 Tex21 protein_coding protein_coding MGP_WSBEiJ_T0000823.1 MGP_WSBEiJ_G0000762.1 mouse_genomes_project 12 8387178 8387927 - TEC TEC MGP_WSBEiJ_T0097195.1 MGP_WSBEiJ_G0035876.1 mouse_genomes_project 12 29677009 29677144 + Gm25913 scaRNA scaRNA MGP_WSBEiJ_T0009750.1 MGP_WSBEiJ_G0007907.1 mouse_genomes_project 12 114737525 114737625 - Gm44471 miRNA miRNA MGP_WSBEiJ_T0000247.1 MGP_WSBEiJ_G0000195.1 mouse_genomes_project 12 116435339 116435632 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0034786.1 MGP_WSBEiJ_G0019349.1 mouse_genomes_project 12 99260302 99305176 + MGP_WSBEiJ_P0034786 Spata7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034787.1 MGP_WSBEiJ_G0019349.1 mouse_genomes_project 12 99260527 99271236 + Spata7 protein_coding retained_intron MGP_WSBEiJ_T0034788.1 MGP_WSBEiJ_G0019349.1 mouse_genomes_project 12 99260532 99302969 + MGP_WSBEiJ_P0034788 Spata7 protein_coding protein_coding MGP_WSBEiJ_T0034789.1 MGP_WSBEiJ_G0019349.1 mouse_genomes_project 12 99260555 99265151 + Spata7 protein_coding retained_intron MGP_WSBEiJ_T0034790.1 MGP_WSBEiJ_G0019349.1 mouse_genomes_project 12 99260562 99302966 + MGP_WSBEiJ_P0034790 Spata7 protein_coding protein_coding MGP_WSBEiJ_T0034791.1 MGP_WSBEiJ_G0019349.1 mouse_genomes_project 12 99296950 99302432 + Spata7 protein_coding retained_intron MGP_WSBEiJ_T0034759.1 MGP_WSBEiJ_G0019341.1 mouse_genomes_project 12 91794736 91929741 + MGP_WSBEiJ_P0034759 Tshr protein_coding protein_coding MGP_WSBEiJ_T0034760.1 MGP_WSBEiJ_G0019341.1 mouse_genomes_project 12 91794742 91911771 + MGP_WSBEiJ_P0034760 Tshr protein_coding protein_coding MGP_WSBEiJ_T0034761.1 MGP_WSBEiJ_G0019341.1 mouse_genomes_project 12 91927293 91928784 + MGP_WSBEiJ_P0034761 Tshr protein_coding protein_coding MGP_WSBEiJ_T0033928.1 MGP_WSBEiJ_G0019056.1 mouse_genomes_project 12 38592249 39008377 + MGP_WSBEiJ_P0033928 Dock4 protein_coding protein_coding MGP_WSBEiJ_T0009645.1 MGP_WSBEiJ_G0007802.1 mouse_genomes_project 12 53214379 53215185 - miRNA miRNA MGP_WSBEiJ_T0009751.1 MGP_WSBEiJ_G0007908.1 mouse_genomes_project 12 118259421 118259539 - Gm44372 miRNA miRNA MGP_WSBEiJ_T0034222.1 MGP_WSBEiJ_G0019169.1 mouse_genomes_project 12 71423917 71511532 - MGP_WSBEiJ_P0034222 Ccdc175 protein_coding protein_coding MGP_WSBEiJ_T0034382.1 MGP_WSBEiJ_G0019233.1 mouse_genomes_project 12 80054007 80156404 - MGP_WSBEiJ_P0034382 Dcaf5 protein_coding protein_coding MGP_WSBEiJ_T0035018.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008862 107062197 + MGP_WSBEiJ_P0035018 Papola protein_coding protein_coding MGP_WSBEiJ_T0035019.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008869 107036029 + Papola protein_coding processed_transcript MGP_WSBEiJ_T0035020.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008874 107064431 + MGP_WSBEiJ_P0035020 Papola protein_coding protein_coding MGP_WSBEiJ_T0035021.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008881 107066248 + MGP_WSBEiJ_P0035021 Papola protein_coding protein_coding MGP_WSBEiJ_T0035022.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008891 107040567 + Papola protein_coding retained_intron MGP_WSBEiJ_T0035023.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008896 107064158 + MGP_WSBEiJ_P0035023 Papola protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035024.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008898 107036191 + Papola protein_coding processed_transcript MGP_WSBEiJ_T0035025.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008901 107066243 + MGP_WSBEiJ_P0035025 Papola protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035026.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008903 107031298 + MGP_WSBEiJ_P0035026 Papola protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035027.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107008915 107036191 + MGP_WSBEiJ_P0035027 Papola protein_coding protein_coding MGP_WSBEiJ_T0035028.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107009030 107064573 + MGP_WSBEiJ_P0035028 Papola protein_coding protein_coding MGP_WSBEiJ_T0035029.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107024414 107037910 + Papola protein_coding retained_intron MGP_WSBEiJ_T0035030.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107035095 107047696 + MGP_WSBEiJ_P0035030 Papola protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035031.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107035805 107036191 + Papola protein_coding retained_intron MGP_WSBEiJ_T0035032.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107038797 107064410 + MGP_WSBEiJ_P0035032 Papola protein_coding protein_coding MGP_WSBEiJ_T0035033.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107038848 107056555 + MGP_WSBEiJ_P0035033 Papola protein_coding protein_coding MGP_WSBEiJ_T0035034.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107045187 107046138 + Papola protein_coding retained_intron MGP_WSBEiJ_T0035035.1 MGP_WSBEiJ_G0019437.1 mouse_genomes_project 12 107056375 107062803 + MGP_WSBEiJ_P0035035 Papola protein_coding protein_coding MGP_WSBEiJ_T0006378.1 MGP_WSBEiJ_G0005314.1 mouse_genomes_project 12 109723155 109743054 - 4930478K11Rik lincRNA lincRNA MGP_WSBEiJ_T0016706.1 MGP_WSBEiJ_G0014648.1 mouse_genomes_project 12 73333094 73357260 - Gm15283 processed_transcript processed_transcript MGP_WSBEiJ_T0012571.1 MGP_WSBEiJ_G0010701.1 mouse_genomes_project 12 108970245 108971091 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035073.1 MGP_WSBEiJ_G0019452.1 mouse_genomes_project 12 110318650 110352504 - MGP_WSBEiJ_P0035073 Wars protein_coding protein_coding MGP_WSBEiJ_T0035074.1 MGP_WSBEiJ_G0019452.1 mouse_genomes_project 12 110318650 110353472 - MGP_WSBEiJ_P0035074 Wars protein_coding protein_coding MGP_WSBEiJ_T0035075.1 MGP_WSBEiJ_G0019452.1 mouse_genomes_project 12 110318650 110353435 - MGP_WSBEiJ_P0035075 Wars protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035076.1 MGP_WSBEiJ_G0019452.1 mouse_genomes_project 12 110318654 110352503 - MGP_WSBEiJ_P0035076 Wars protein_coding protein_coding MGP_WSBEiJ_T0035077.1 MGP_WSBEiJ_G0019452.1 mouse_genomes_project 12 110325149 110334619 - Wars protein_coding retained_intron MGP_WSBEiJ_T0035078.1 MGP_WSBEiJ_G0019452.1 mouse_genomes_project 12 110334451 110353399 - MGP_WSBEiJ_P0035078 Wars protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035079.1 MGP_WSBEiJ_G0019452.1 mouse_genomes_project 12 110340087 110347762 - Wars protein_coding retained_intron MGP_WSBEiJ_T0000026.1 MGP_WSBEiJ_G0000020.1 mouse_genomes_project 12 115211802 115211812 - MGP_WSBEiJ_P0000026 Ighd5-5 IG_D_gene IG_D_gene MGP_WSBEiJ_T0006364.1 MGP_WSBEiJ_G0005304.1 mouse_genomes_project 12 107852851 107869571 + Gm17033 lincRNA lincRNA MGP_WSBEiJ_T0033637.1 MGP_WSBEiJ_G0018953.1 mouse_genomes_project 12 8405712 8432174 - MGP_WSBEiJ_P0033637 Gen1 protein_coding protein_coding MGP_WSBEiJ_T0099014.1 MGP_WSBEiJ_G0037677.1 mouse_genomes_project 12 111100219 111100290 + Gm23600 snoRNA snoRNA MGP_WSBEiJ_T0006341.1 MGP_WSBEiJ_G0005282.1 mouse_genomes_project 12 80645342 80647239 - lincRNA lincRNA MGP_WSBEiJ_T0098979.1 MGP_WSBEiJ_G0037642.1 mouse_genomes_project 12 37563772 37563899 + Gm24069 snoRNA snoRNA MGP_WSBEiJ_T0034579.1 MGP_WSBEiJ_G0019292.1 mouse_genomes_project 12 84970834 85025071 - MGP_WSBEiJ_P0034579 Arel1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034580.1 MGP_WSBEiJ_G0019292.1 mouse_genomes_project 12 84970836 85025147 - MGP_WSBEiJ_P0034580 Arel1 protein_coding protein_coding MGP_WSBEiJ_T0034581.1 MGP_WSBEiJ_G0019292.1 mouse_genomes_project 12 84987086 84996619 - MGP_WSBEiJ_P0034581 Arel1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034582.1 MGP_WSBEiJ_G0019292.1 mouse_genomes_project 12 84992419 85000164 - MGP_WSBEiJ_P0034582 Arel1 protein_coding protein_coding MGP_WSBEiJ_T0034583.1 MGP_WSBEiJ_G0019292.1 mouse_genomes_project 12 84994019 84998639 - MGP_WSBEiJ_P0034583 Arel1 protein_coding protein_coding MGP_WSBEiJ_T0034584.1 MGP_WSBEiJ_G0019292.1 mouse_genomes_project 12 84994040 85025103 - MGP_WSBEiJ_P0034584 Arel1 protein_coding protein_coding MGP_WSBEiJ_T0034585.1 MGP_WSBEiJ_G0019292.1 mouse_genomes_project 12 84994049 85025085 - MGP_WSBEiJ_P0034585 Arel1 protein_coding protein_coding MGP_WSBEiJ_T0034586.1 MGP_WSBEiJ_G0019292.1 mouse_genomes_project 12 85004322 85020246 - Arel1 protein_coding processed_transcript MGP_WSBEiJ_T0034360.1 MGP_WSBEiJ_G0019223.1 mouse_genomes_project 12 78665249 78715813 + MGP_WSBEiJ_P0034360 Plekhh1 protein_coding protein_coding MGP_WSBEiJ_T0009667.1 MGP_WSBEiJ_G0007824.1 mouse_genomes_project 12 100684233 100684311 - Gm23291 miRNA miRNA MGP_WSBEiJ_T0034975.1 MGP_WSBEiJ_G0019409.1 mouse_genomes_project 12 105062589 105072280 + MGP_WSBEiJ_P0034975 Serpina5 protein_coding protein_coding MGP_WSBEiJ_T0009698.1 MGP_WSBEiJ_G0007855.1 mouse_genomes_project 12 111171381 111171447 + Mir379 miRNA miRNA MGP_WSBEiJ_T0035246.1 MGP_WSBEiJ_G0019510.1 mouse_genomes_project 12 114644026 114646475 + MGP_WSBEiJ_P0035246 Btbd6 protein_coding protein_coding MGP_WSBEiJ_T0035247.1 MGP_WSBEiJ_G0019510.1 mouse_genomes_project 12 114644107 114646475 + MGP_WSBEiJ_P0035247 Btbd6 protein_coding protein_coding MGP_WSBEiJ_T0009665.1 MGP_WSBEiJ_G0007822.1 mouse_genomes_project 12 89775739 89775805 + Gm23989 miRNA miRNA MGP_WSBEiJ_T0034096.1 MGP_WSBEiJ_G0019123.1 mouse_genomes_project 12 63935169 63959441 - MGP_WSBEiJ_P0034096 Klhl28 protein_coding protein_coding MGP_WSBEiJ_T0097747.1 MGP_WSBEiJ_G0036410.1 mouse_genomes_project 12 1633547 1633652 + Gm23676 snRNA snRNA MGP_WSBEiJ_T0034987.1 MGP_WSBEiJ_G0019418.1 mouse_genomes_project 12 105404334 105496032 + MGP_WSBEiJ_P0034987 Serpina3m protein_coding protein_coding MGP_WSBEiJ_T0034988.1 MGP_WSBEiJ_G0019418.1 mouse_genomes_project 12 105488117 105496033 + MGP_WSBEiJ_P0034988 Serpina3m protein_coding protein_coding MGP_WSBEiJ_T0035072.1 MGP_WSBEiJ_G0019451.1 mouse_genomes_project 12 110309731 110315426 + MGP_WSBEiJ_P0035072 Slc25a47 protein_coding protein_coding MGP_WSBEiJ_T0034362.1 MGP_WSBEiJ_G0019225.1 mouse_genomes_project 12 78763418 78789895 + MGP_WSBEiJ_P0034362 Arg2 protein_coding protein_coding MGP_WSBEiJ_T0033991.1 MGP_WSBEiJ_G0019087.1 mouse_genomes_project 12 53469989 53568061 - MGP_WSBEiJ_P0033991 Baz1a protein_coding protein_coding MGP_WSBEiJ_T0033992.1 MGP_WSBEiJ_G0019087.1 mouse_genomes_project 12 53470551 53568232 - MGP_WSBEiJ_P0033992 Baz1a protein_coding protein_coding MGP_WSBEiJ_T0033993.1 MGP_WSBEiJ_G0019087.1 mouse_genomes_project 12 53471877 53472858 - Baz1a protein_coding retained_intron MGP_WSBEiJ_T0033994.1 MGP_WSBEiJ_G0019087.1 mouse_genomes_project 12 53502549 53509862 - MGP_WSBEiJ_P0033994 Baz1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033995.1 MGP_WSBEiJ_G0019087.1 mouse_genomes_project 12 53520424 53524031 - MGP_WSBEiJ_P0033995 Baz1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033996.1 MGP_WSBEiJ_G0019087.1 mouse_genomes_project 12 53534629 53596405 - MGP_WSBEiJ_P0033996 Baz1a protein_coding protein_coding MGP_WSBEiJ_T0033997.1 MGP_WSBEiJ_G0019087.1 mouse_genomes_project 12 53556946 53567661 - MGP_WSBEiJ_P0033997 Baz1a protein_coding protein_coding MGP_WSBEiJ_T0033998.1 MGP_WSBEiJ_G0019087.1 mouse_genomes_project 12 53556961 53580856 - MGP_WSBEiJ_P0033998 Baz1a protein_coding protein_coding MGP_WSBEiJ_T0034425.1 MGP_WSBEiJ_G0019247.1 mouse_genomes_project 12 81300801 81333559 - MGP_WSBEiJ_P0034425 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034426.1 MGP_WSBEiJ_G0019247.1 mouse_genomes_project 12 81303842 81311153 - MGP_WSBEiJ_P0034426 protein_coding protein_coding MGP_WSBEiJ_T0034427.1 MGP_WSBEiJ_G0019247.1 mouse_genomes_project 12 81303972 81333660 - MGP_WSBEiJ_P0034427 protein_coding protein_coding MGP_WSBEiJ_T0009637.1 MGP_WSBEiJ_G0007794.1 mouse_genomes_project 12 28327299 28327634 - Gm25243 miRNA miRNA MGP_WSBEiJ_T0034141.1 MGP_WSBEiJ_G0019144.1 mouse_genomes_project 12 68801658 68805016 - Sos2 protein_coding retained_intron MGP_WSBEiJ_T0034142.1 MGP_WSBEiJ_G0019144.1 mouse_genomes_project 12 68801662 68903274 - MGP_WSBEiJ_P0034142 Sos2 protein_coding protein_coding MGP_WSBEiJ_T0034143.1 MGP_WSBEiJ_G0019144.1 mouse_genomes_project 12 68802749 68903263 - MGP_WSBEiJ_P0034143 Sos2 protein_coding protein_coding MGP_WSBEiJ_T0034144.1 MGP_WSBEiJ_G0019144.1 mouse_genomes_project 12 68802985 68903049 - MGP_WSBEiJ_P0034144 Sos2 protein_coding protein_coding MGP_WSBEiJ_T0034145.1 MGP_WSBEiJ_G0019144.1 mouse_genomes_project 12 68803271 68806703 - Sos2 protein_coding retained_intron MGP_WSBEiJ_T0034146.1 MGP_WSBEiJ_G0019144.1 mouse_genomes_project 12 68812294 68814685 - Sos2 protein_coding retained_intron MGP_WSBEiJ_T0034147.1 MGP_WSBEiJ_G0019144.1 mouse_genomes_project 12 68832831 68835505 - Sos2 protein_coding retained_intron MGP_WSBEiJ_T0009749.1 MGP_WSBEiJ_G0007906.1 mouse_genomes_project 12 114588544 114588603 - Mir6941 miRNA miRNA MGP_WSBEiJ_T0034867.1 MGP_WSBEiJ_G0019371.1 mouse_genomes_project 12 102767933 102809764 - MGP_WSBEiJ_P0034867 Atxn3 protein_coding protein_coding MGP_WSBEiJ_T0034868.1 MGP_WSBEiJ_G0019371.1 mouse_genomes_project 12 102772113 102783394 - MGP_WSBEiJ_P0034868 Atxn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034869.1 MGP_WSBEiJ_G0019371.1 mouse_genomes_project 12 102781962 102809761 - MGP_WSBEiJ_P0034869 Atxn3 protein_coding protein_coding MGP_WSBEiJ_T0034870.1 MGP_WSBEiJ_G0019371.1 mouse_genomes_project 12 102781964 102809761 - MGP_WSBEiJ_P0034870 Atxn3 protein_coding protein_coding MGP_WSBEiJ_T0034871.1 MGP_WSBEiJ_G0019371.1 mouse_genomes_project 12 102781987 102809666 - MGP_WSBEiJ_P0034871 Atxn3 protein_coding protein_coding MGP_WSBEiJ_T0034902.1 MGP_WSBEiJ_G0019385.1 mouse_genomes_project 12 103675144 103770689 - MGP_WSBEiJ_P0034902 Btbd7 protein_coding protein_coding MGP_WSBEiJ_T0000080.1 MGP_WSBEiJ_G0000064.1 mouse_genomes_project 12 116177354 116177653 - MGP_WSBEiJ_P0000080 Ighv3-5 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000081.1 MGP_WSBEiJ_G0000064.1 mouse_genomes_project 12 116177354 116177791 - MGP_WSBEiJ_P0000081 Ighv3-5 IG_V_gene IG_V_gene MGP_WSBEiJ_T0035043.1 MGP_WSBEiJ_G0019441.1 mouse_genomes_project 12 109510512 109576188 - MGP_WSBEiJ_P0035043 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035044.1 MGP_WSBEiJ_G0019441.1 mouse_genomes_project 12 109515242 109518196 - protein_coding processed_transcript MGP_WSBEiJ_T0035045.1 MGP_WSBEiJ_G0019441.1 mouse_genomes_project 12 109519882 109576089 - MGP_WSBEiJ_P0035045 protein_coding protein_coding MGP_WSBEiJ_T0035046.1 MGP_WSBEiJ_G0019441.1 mouse_genomes_project 12 109520141 109576136 - MGP_WSBEiJ_P0035046 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035047.1 MGP_WSBEiJ_G0019441.1 mouse_genomes_project 12 109521404 109559882 - protein_coding processed_transcript MGP_WSBEiJ_T0035048.1 MGP_WSBEiJ_G0019441.1 mouse_genomes_project 12 109554857 109576086 - MGP_WSBEiJ_P0035048 protein_coding protein_coding MGP_WSBEiJ_T0035293.1 MGP_WSBEiJ_G0019522.1 mouse_genomes_project 12 118396134 118490564 + MGP_WSBEiJ_P0035293 Esyt2 protein_coding protein_coding MGP_WSBEiJ_T0011140.1 MGP_WSBEiJ_G0009297.1 mouse_genomes_project 12 104035528 104035690 + Gm27976 misc_RNA misc_RNA MGP_WSBEiJ_T0034285.1 MGP_WSBEiJ_G0019196.1 mouse_genomes_project 12 75192540 75215994 - MGP_WSBEiJ_P0034285 Sgpp1 protein_coding protein_coding MGP_WSBEiJ_T0011132.1 MGP_WSBEiJ_G0009289.1 mouse_genomes_project 12 69170464 69170774 + Gm22058 misc_RNA misc_RNA MGP_WSBEiJ_T0000068.1 MGP_WSBEiJ_G0000055.1 mouse_genomes_project 12 115692719 115693241 - MGP_WSBEiJ_P0000068 Ighv5-17 IG_V_gene IG_V_gene MGP_WSBEiJ_T0033679.1 MGP_WSBEiJ_G0018970.1 mouse_genomes_project 12 14543005 14547803 - MGP_WSBEiJ_P0033679 Kcnf1 protein_coding protein_coding MGP_WSBEiJ_T0009663.1 MGP_WSBEiJ_G0007820.1 mouse_genomes_project 12 87704380 87704459 - Mir3068 miRNA miRNA MGP_WSBEiJ_T0035177.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113358580 113411908 + MGP_WSBEiJ_P0035177 Klc1 protein_coding protein_coding MGP_WSBEiJ_T0035178.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113358687 113399920 + MGP_WSBEiJ_P0035178 Klc1 protein_coding protein_coding MGP_WSBEiJ_T0035179.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113358744 113411860 + MGP_WSBEiJ_P0035179 Klc1 protein_coding protein_coding MGP_WSBEiJ_T0035180.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113372701 113399918 + MGP_WSBEiJ_P0035180 Klc1 protein_coding protein_coding MGP_WSBEiJ_T0035181.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113382338 113412979 + MGP_WSBEiJ_P0035181 Klc1 protein_coding protein_coding MGP_WSBEiJ_T0035182.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113386972 113392423 + Klc1 protein_coding retained_intron MGP_WSBEiJ_T0035183.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113393958 113399421 + Klc1 protein_coding processed_transcript MGP_WSBEiJ_T0035184.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113400376 113411859 + Klc1 protein_coding retained_intron MGP_WSBEiJ_T0035190.1 MGP_WSBEiJ_G0019484.1 mouse_genomes_project 12 113410639 113411844 + Klc1 protein_coding retained_intron MGP_WSBEiJ_T0012578.1 MGP_WSBEiJ_G0010708.1 mouse_genomes_project 12 116107207 116107519 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033575.1 MGP_WSBEiJ_G0018931.1 mouse_genomes_project 12 1746932 1759205 - Mfsd2b protein_coding retained_intron MGP_WSBEiJ_T0033576.1 MGP_WSBEiJ_G0018931.1 mouse_genomes_project 12 1746932 1759208 - MGP_WSBEiJ_P0033576 Mfsd2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033577.1 MGP_WSBEiJ_G0018931.1 mouse_genomes_project 12 1747625 1759195 - Mfsd2b protein_coding retained_intron MGP_WSBEiJ_T0033578.1 MGP_WSBEiJ_G0018931.1 mouse_genomes_project 12 1748089 1759209 - Mfsd2b protein_coding retained_intron MGP_WSBEiJ_T0033579.1 MGP_WSBEiJ_G0018931.1 mouse_genomes_project 12 1748876 1759186 - MGP_WSBEiJ_P0033579 Mfsd2b protein_coding protein_coding MGP_WSBEiJ_T0033580.1 MGP_WSBEiJ_G0018931.1 mouse_genomes_project 12 1752073 1754113 - Mfsd2b protein_coding retained_intron MGP_WSBEiJ_T0033581.1 MGP_WSBEiJ_G0018931.1 mouse_genomes_project 12 1753799 1759209 - MGP_WSBEiJ_P0033581 Mfsd2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035210.1 MGP_WSBEiJ_G0019492.1 mouse_genomes_project 12 113756229 113793921 + MGP_WSBEiJ_P0035210 Kif26a protein_coding protein_coding MGP_WSBEiJ_T0035211.1 MGP_WSBEiJ_G0019492.1 mouse_genomes_project 12 113791373 113792710 + Kif26a protein_coding processed_transcript MGP_WSBEiJ_T0000032.1 MGP_WSBEiJ_G0000026.1 mouse_genomes_project 12 115262069 115262079 - IG_D_pseudogene IG_D_pseudogene MGP_WSBEiJ_T0033749.1 MGP_WSBEiJ_G0018993.1 mouse_genomes_project 12 24994163 25002490 - MGP_WSBEiJ_P0033749 Sox11 protein_coding protein_coding MGP_WSBEiJ_T0009741.1 MGP_WSBEiJ_G0007898.1 mouse_genomes_project 12 111209980 111210063 + Mir3072 miRNA miRNA MGP_WSBEiJ_T0000241.1 MGP_WSBEiJ_G0000189.1 mouse_genomes_project 12 116072752 116073033 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0006372.1 MGP_WSBEiJ_G0005309.1 mouse_genomes_project 12 108457288 108460160 + Gm16085 lincRNA lincRNA MGP_WSBEiJ_T0034356.1 MGP_WSBEiJ_G0019221.1 mouse_genomes_project 12 78498474 78519747 - MGP_WSBEiJ_P0034356 Plek2 protein_coding protein_coding MGP_WSBEiJ_T0034823.1 MGP_WSBEiJ_G0019357.1 mouse_genomes_project 12 100665223 100765739 + MGP_WSBEiJ_P0034823 Kcnk13 protein_coding protein_coding MGP_WSBEiJ_T0034824.1 MGP_WSBEiJ_G0019357.1 mouse_genomes_project 12 100665223 100765739 + MGP_WSBEiJ_P0034824 Kcnk13 protein_coding protein_coding MGP_WSBEiJ_T0034825.1 MGP_WSBEiJ_G0019357.1 mouse_genomes_project 12 100665229 100667005 + MGP_WSBEiJ_P0034825 Kcnk13 protein_coding protein_coding MGP_WSBEiJ_T0034826.1 MGP_WSBEiJ_G0019357.1 mouse_genomes_project 12 100665249 100765731 + MGP_WSBEiJ_P0034826 Kcnk13 protein_coding protein_coding MGP_WSBEiJ_T0033979.1 MGP_WSBEiJ_G0019080.1 mouse_genomes_project 12 51198495 51655001 + MGP_WSBEiJ_P0033979 Akap6 protein_coding protein_coding MGP_WSBEiJ_T0034731.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89023504 89595250 + Nrxn3 protein_coding retained_intron MGP_WSBEiJ_T0034732.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89023516 89159809 + Nrxn3 protein_coding retained_intron MGP_WSBEiJ_T0034733.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89023522 89163378 + MGP_WSBEiJ_P0034733 Nrxn3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034734.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89023614 90715643 + MGP_WSBEiJ_P0034734 Nrxn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034735.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89023737 90715662 + MGP_WSBEiJ_P0034735 Nrxn3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034736.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89025711 89096612 + Nrxn3 protein_coding processed_transcript MGP_WSBEiJ_T0034737.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89026383 89096478 + Nrxn3 protein_coding processed_transcript MGP_WSBEiJ_T0034738.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89096000 90717700 + MGP_WSBEiJ_P0034738 Nrxn3 protein_coding protein_coding MGP_WSBEiJ_T0034739.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89096935 89163501 + Nrxn3 protein_coding processed_transcript MGP_WSBEiJ_T0034740.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89270833 89517472 + Nrxn3 protein_coding processed_transcript MGP_WSBEiJ_T0034741.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89270842 90715825 + MGP_WSBEiJ_P0034741 Nrxn3 protein_coding protein_coding MGP_WSBEiJ_T0034742.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 89523253 90715175 + MGP_WSBEiJ_P0034742 Nrxn3 protein_coding protein_coding MGP_WSBEiJ_T0034743.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 90171584 90715664 + MGP_WSBEiJ_P0034743 Nrxn3 protein_coding protein_coding MGP_WSBEiJ_T0034744.1 MGP_WSBEiJ_G0019338.1 mouse_genomes_project 12 90171584 90716208 + MGP_WSBEiJ_P0034744 Nrxn3 protein_coding protein_coding MGP_WSBEiJ_T0034374.1 MGP_WSBEiJ_G0019229.1 mouse_genomes_project 12 78873121 78942146 - MGP_WSBEiJ_P0034374 Zfyve26 protein_coding protein_coding MGP_WSBEiJ_T0000224.1 MGP_WSBEiJ_G0000172.1 mouse_genomes_project 12 115310851 115311288 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0097779.1 MGP_WSBEiJ_G0036442.1 mouse_genomes_project 12 78746020 78746125 - Gm27297 snRNA snRNA MGP_WSBEiJ_T0033706.1 MGP_WSBEiJ_G0018978.1 mouse_genomes_project 12 18758397 18765607 + MGP_WSBEiJ_P0033706 Iah1 protein_coding protein_coding MGP_WSBEiJ_T0096935.1 MGP_WSBEiJ_G0035616.1 mouse_genomes_project 12 67793413 67793531 + n-R5s61 rRNA rRNA MGP_WSBEiJ_T0000059.1 MGP_WSBEiJ_G0000048.1 mouse_genomes_project 12 115580746 115581206 + MGP_WSBEiJ_P0000059 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034411.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81136387 81281542 - MGP_WSBEiJ_P0034411 Cox16 protein_coding protein_coding MGP_WSBEiJ_T0034412.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81136529 81281505 - MGP_WSBEiJ_P0034412 Cox16 protein_coding protein_coding MGP_WSBEiJ_T0034414.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81264312 81281552 - MGP_WSBEiJ_P0034414 Cox16 protein_coding protein_coding MGP_WSBEiJ_T0034415.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81265697 81281261 - Cox16 protein_coding processed_transcript MGP_WSBEiJ_T0034416.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81265697 81281545 - MGP_WSBEiJ_P0034416 Cox16 protein_coding protein_coding MGP_WSBEiJ_T0034417.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81265699 81281283 - Cox16 protein_coding processed_transcript MGP_WSBEiJ_T0034418.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81267838 81281559 - Cox16 protein_coding processed_transcript MGP_WSBEiJ_T0034419.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81267859 81281546 - MGP_WSBEiJ_P0034419 Cox16 protein_coding protein_coding MGP_WSBEiJ_T0034423.1 MGP_WSBEiJ_G0019246.1 mouse_genomes_project 12 81274947 81281517 - Cox16 protein_coding retained_intron MGP_WSBEiJ_T0012556.1 MGP_WSBEiJ_G0010686.1 mouse_genomes_project 12 92379299 92381242 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096937.1 MGP_WSBEiJ_G0035618.1 mouse_genomes_project 12 82429380 82429483 - n-R5s63 rRNA rRNA MGP_WSBEiJ_T0097196.1 MGP_WSBEiJ_G0035877.1 mouse_genomes_project 12 80115473 80115612 - Scarna3b scaRNA scaRNA MGP_WSBEiJ_T0033990.1 MGP_WSBEiJ_G0019086.1 mouse_genomes_project 12 53427798 53431856 - MGP_WSBEiJ_P0033990 Cfl2 protein_coding protein_coding MGP_WSBEiJ_T0096926.1 MGP_WSBEiJ_G0035607.1 mouse_genomes_project 12 9895813 9895918 - Gm27952 rRNA rRNA MGP_WSBEiJ_T0033935.1 MGP_WSBEiJ_G0019059.1 mouse_genomes_project 12 42454387 42460646 - MGP_WSBEiJ_P0033935 Dnajb9 protein_coding protein_coding MGP_WSBEiJ_T0033740.1 MGP_WSBEiJ_G0018988.1 mouse_genomes_project 12 22504410 22596931 + MGP_WSBEiJ_P0033740 Kidins220 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033741.1 MGP_WSBEiJ_G0018988.1 mouse_genomes_project 12 22504764 22593482 + MGP_WSBEiJ_P0033741 Kidins220 protein_coding protein_coding MGP_WSBEiJ_T0035268.1 MGP_WSBEiJ_G0019516.1 mouse_genomes_project 12 114826656 114834206 + Crip1 protein_coding processed_transcript MGP_WSBEiJ_T0035269.1 MGP_WSBEiJ_G0019516.1 mouse_genomes_project 12 114829067 114834173 + MGP_WSBEiJ_P0035269 Crip1 protein_coding protein_coding MGP_WSBEiJ_T0035270.1 MGP_WSBEiJ_G0019516.1 mouse_genomes_project 12 114832353 114834204 + MGP_WSBEiJ_P0035270 Crip1 protein_coding protein_coding MGP_WSBEiJ_T0035271.1 MGP_WSBEiJ_G0019516.1 mouse_genomes_project 12 114832394 114834206 + MGP_WSBEiJ_P0035271 Crip1 protein_coding protein_coding MGP_WSBEiJ_T0035272.1 MGP_WSBEiJ_G0019516.1 mouse_genomes_project 12 114832412 114834206 + Crip1 protein_coding retained_intron MGP_WSBEiJ_T0035273.1 MGP_WSBEiJ_G0019516.1 mouse_genomes_project 12 114832422 114834206 + Crip1 protein_coding retained_intron MGP_WSBEiJ_T0000012.1 MGP_WSBEiJ_G0000009.1 mouse_genomes_project 12 115137064 115147370 - MGP_WSBEiJ_P0000012 Ighd IG_C_gene IG_C_gene MGP_WSBEiJ_T0000013.1 MGP_WSBEiJ_G0000009.1 mouse_genomes_project 12 115140010 115147370 - MGP_WSBEiJ_P0000013 Ighd IG_C_gene IG_C_gene MGP_WSBEiJ_T0035281.1 MGP_WSBEiJ_G0000009.1 mouse_genomes_project 12 115137060 115147350 - MGP_WSBEiJ_P0035281 Ighd IG_C_gene unknown_likely_coding MGP_WSBEiJ_T0035282.1 MGP_WSBEiJ_G0000009.1 mouse_genomes_project 12 115137060 115147209 - MGP_WSBEiJ_P0035282 Ighd IG_C_gene unknown_likely_coding MGP_WSBEiJ_T0033643.1 MGP_WSBEiJ_G0018958.1 mouse_genomes_project 12 10166367 10172189 - MGP_WSBEiJ_P0033643 Mycn protein_coding protein_coding MGP_WSBEiJ_T0033644.1 MGP_WSBEiJ_G0018958.1 mouse_genomes_project 12 10166367 10170893 - MGP_WSBEiJ_P0033644 Mycn protein_coding protein_coding MGP_WSBEiJ_T0033645.1 MGP_WSBEiJ_G0018958.1 mouse_genomes_project 12 10171220 10172100 - Mycn protein_coding processed_transcript MGP_WSBEiJ_T0006344.1 MGP_WSBEiJ_G0005285.1 mouse_genomes_project 12 83984143 84001820 - 4732463B04Rik lincRNA lincRNA MGP_WSBEiJ_T0033595.1 MGP_WSBEiJ_G0018940.1 mouse_genomes_project 12 5576438 5666375 - MGP_WSBEiJ_P0033595 Slc7a15 protein_coding protein_coding MGP_WSBEiJ_T0033596.1 MGP_WSBEiJ_G0018940.1 mouse_genomes_project 12 5577300 5589095 - MGP_WSBEiJ_P0033596 Slc7a15 protein_coding protein_coding MGP_WSBEiJ_T0033597.1 MGP_WSBEiJ_G0018940.1 mouse_genomes_project 12 5587750 5589116 - Slc7a15 protein_coding processed_transcript MGP_WSBEiJ_T0006371.1 MGP_WSBEiJ_G0005308.1 mouse_genomes_project 12 108401336 108424321 - Gm16086 lincRNA lincRNA MGP_WSBEiJ_T0034989.1 MGP_WSBEiJ_G0019419.1 mouse_genomes_project 12 105514512 105522122 + MGP_WSBEiJ_P0034989 Serpina3n protein_coding protein_coding MGP_WSBEiJ_T0035283.1 MGP_WSBEiJ_G0019519.1 mouse_genomes_project 12 118155552 118168454 + MGP_WSBEiJ_P0035283 Zfp386 protein_coding protein_coding MGP_WSBEiJ_T0035284.1 MGP_WSBEiJ_G0019519.1 mouse_genomes_project 12 118155592 118162979 + Zfp386 protein_coding retained_intron MGP_WSBEiJ_T0035285.1 MGP_WSBEiJ_G0019519.1 mouse_genomes_project 12 118155657 118159545 + Zfp386 protein_coding retained_intron MGP_WSBEiJ_T0034992.1 MGP_WSBEiJ_G0019422.1 mouse_genomes_project 12 105813586 105877693 - MGP_WSBEiJ_P0034992 Dicer1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009646.1 MGP_WSBEiJ_G0007803.1 mouse_genomes_project 12 54540267 54540358 - Gm23394 miRNA miRNA MGP_WSBEiJ_T0033542.1 MGP_WSBEiJ_G0018915.1 mouse_genomes_project 12 766183 766580 + MGP_WSBEiJ_P0033542 Gm17728 protein_coding protein_coding MGP_WSBEiJ_T0097789.1 MGP_WSBEiJ_G0036452.1 mouse_genomes_project 12 118598009 118598073 - Gm27649 snRNA snRNA MGP_WSBEiJ_T0034367.1 MGP_WSBEiJ_G0019227.1 mouse_genomes_project 12 78807870 78828824 - MGP_WSBEiJ_P0034367 Rdh11 protein_coding protein_coding MGP_WSBEiJ_T0034368.1 MGP_WSBEiJ_G0019227.1 mouse_genomes_project 12 78809084 78827491 - MGP_WSBEiJ_P0034368 Rdh11 protein_coding protein_coding MGP_WSBEiJ_T0034369.1 MGP_WSBEiJ_G0019227.1 mouse_genomes_project 12 78809698 78828324 - MGP_WSBEiJ_P0034369 Rdh11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033548.1 MGP_WSBEiJ_G0018919.1 mouse_genomes_project 12 979398 1061992 + Adcy3 protein_coding retained_intron MGP_WSBEiJ_T0033549.1 MGP_WSBEiJ_G0018919.1 mouse_genomes_project 12 979399 1061992 + MGP_WSBEiJ_P0033549 Adcy3 protein_coding protein_coding MGP_WSBEiJ_T0033550.1 MGP_WSBEiJ_G0018919.1 mouse_genomes_project 12 979692 1061992 + MGP_WSBEiJ_P0033550 Adcy3 protein_coding protein_coding MGP_WSBEiJ_T0033551.1 MGP_WSBEiJ_G0018919.1 mouse_genomes_project 12 979697 1061991 + MGP_WSBEiJ_P0033551 Adcy3 protein_coding protein_coding MGP_WSBEiJ_T0033552.1 MGP_WSBEiJ_G0018919.1 mouse_genomes_project 12 980448 1061991 + MGP_WSBEiJ_P0033552 Adcy3 protein_coding protein_coding MGP_WSBEiJ_T0033553.1 MGP_WSBEiJ_G0018919.1 mouse_genomes_project 12 1006188 1032047 + Adcy3 protein_coding processed_transcript MGP_WSBEiJ_T0033554.1 MGP_WSBEiJ_G0018919.1 mouse_genomes_project 12 1042969 1045053 + Adcy3 protein_coding retained_intron MGP_WSBEiJ_T0033557.1 MGP_WSBEiJ_G0018919.1 mouse_genomes_project 12 1051402 1054386 + Adcy3 protein_coding retained_intron MGP_WSBEiJ_T0034387.1 MGP_WSBEiJ_G0019237.1 mouse_genomes_project 12 80387651 80428700 + MGP_WSBEiJ_P0034387 Slc39a9 protein_coding protein_coding MGP_WSBEiJ_T0012520.1 MGP_WSBEiJ_G0010650.1 mouse_genomes_project 12 6554212 6554364 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000830.1 MGP_WSBEiJ_G0000769.1 mouse_genomes_project 12 72301757 72302572 + TEC TEC MGP_WSBEiJ_T0033592.1 MGP_WSBEiJ_G0018937.1 mouse_genomes_project 12 5331989 5336010 - MGP_WSBEiJ_P0033592 Gdf7 protein_coding protein_coding MGP_WSBEiJ_T0033820.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29745331 29769664 - MGP_WSBEiJ_P0033820 Hbp1 protein_coding protein_coding MGP_WSBEiJ_T0033821.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29748457 29769352 - MGP_WSBEiJ_P0033821 Hbp1 protein_coding protein_coding MGP_WSBEiJ_T0033822.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29749909 29759504 - MGP_WSBEiJ_P0033822 Hbp1 protein_coding protein_coding MGP_WSBEiJ_T0033823.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29750020 29753900 - Hbp1 protein_coding retained_intron MGP_WSBEiJ_T0033824.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29751929 29768664 - MGP_WSBEiJ_P0033824 Hbp1 protein_coding protein_coding MGP_WSBEiJ_T0033825.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29753438 29769299 - MGP_WSBEiJ_P0033825 Hbp1 protein_coding protein_coding MGP_WSBEiJ_T0033826.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29755556 29769350 - MGP_WSBEiJ_P0033826 Hbp1 protein_coding protein_coding MGP_WSBEiJ_T0033827.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29756142 29769339 - MGP_WSBEiJ_P0033827 Hbp1 protein_coding protein_coding MGP_WSBEiJ_T0033828.1 MGP_WSBEiJ_G0019020.1 mouse_genomes_project 12 29758847 29769363 - Hbp1 protein_coding retained_intron MGP_WSBEiJ_T0034248.1 MGP_WSBEiJ_G0019178.1 mouse_genomes_project 12 72396129 72398934 - Six1 protein_coding processed_transcript MGP_WSBEiJ_T0034249.1 MGP_WSBEiJ_G0019178.1 mouse_genomes_project 12 72397946 72403314 - MGP_WSBEiJ_P0034249 Six1 protein_coding protein_coding MGP_WSBEiJ_T0034250.1 MGP_WSBEiJ_G0019178.1 mouse_genomes_project 12 72399649 72411401 - Six1 protein_coding processed_transcript MGP_WSBEiJ_T0034251.1 MGP_WSBEiJ_G0019178.1 mouse_genomes_project 12 72399892 72401426 - Six1 protein_coding processed_transcript MGP_WSBEiJ_T0034139.1 MGP_WSBEiJ_G0019142.1 mouse_genomes_project 12 68570477 68574308 + MGP_WSBEiJ_P0034139 Arf6 protein_coding protein_coding MGP_WSBEiJ_T0033886.1 MGP_WSBEiJ_G0019047.1 mouse_genomes_project 12 35237866 35612291 + MGP_WSBEiJ_P0033886 Agmo protein_coding protein_coding MGP_WSBEiJ_T0033887.1 MGP_WSBEiJ_G0019047.1 mouse_genomes_project 12 35237966 35243170 + MGP_WSBEiJ_P0033887 Agmo protein_coding protein_coding MGP_WSBEiJ_T0033888.1 MGP_WSBEiJ_G0019047.1 mouse_genomes_project 12 35237995 35416802 + Agmo protein_coding retained_intron MGP_WSBEiJ_T0033889.1 MGP_WSBEiJ_G0019047.1 mouse_genomes_project 12 35238076 35434297 + MGP_WSBEiJ_P0033889 Agmo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033890.1 MGP_WSBEiJ_G0019047.1 mouse_genomes_project 12 35238258 35596509 + MGP_WSBEiJ_P0033890 Agmo protein_coding protein_coding MGP_WSBEiJ_T0000261.1 MGP_WSBEiJ_G0000209.1 mouse_genomes_project 12 116915898 116916332 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0006314.1 MGP_WSBEiJ_G0005263.1 mouse_genomes_project 12 30659091 30664190 + Gdap10 lincRNA lincRNA MGP_WSBEiJ_T0000240.1 MGP_WSBEiJ_G0000188.1 mouse_genomes_project 12 115956608 115956904 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0099017.1 MGP_WSBEiJ_G0037680.1 mouse_genomes_project 12 111108720 111108793 + DQ267101 snoRNA snoRNA MGP_WSBEiJ_T0012582.1 MGP_WSBEiJ_G0010712.1 mouse_genomes_project 12 117724774 117725754 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000239.1 MGP_WSBEiJ_G0000187.1 mouse_genomes_project 12 115876839 115877192 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0033593.1 MGP_WSBEiJ_G0018938.1 mouse_genomes_project 12 5348405 5379800 + MGP_WSBEiJ_P0033593 Hs1bp3 protein_coding protein_coding MGP_WSBEiJ_T0000014.1 MGP_WSBEiJ_G0000010.1 mouse_genomes_project 12 115149533 115153746 - MGP_WSBEiJ_P0000014 Ighm IG_C_gene IG_C_gene MGP_WSBEiJ_T0000015.1 MGP_WSBEiJ_G0000010.1 mouse_genomes_project 12 115151756 115153746 - MGP_WSBEiJ_P0000015 Ighm IG_C_gene IG_C_gene MGP_WSBEiJ_T0006354.1 MGP_WSBEiJ_G0005295.1 mouse_genomes_project 12 100306571 100308493 - 1700064M15Rik lincRNA lincRNA MGP_WSBEiJ_T0000835.1 MGP_WSBEiJ_G0000774.1 mouse_genomes_project 12 86197204 86197811 + TEC TEC MGP_WSBEiJ_T0000008.1 MGP_WSBEiJ_G0000006.1 mouse_genomes_project 12 115032345 115033886 - MGP_WSBEiJ_P0000008 IG_C_gene IG_C_gene MGP_WSBEiJ_T0000840.1 MGP_WSBEiJ_G0000779.1 mouse_genomes_project 12 113977173 113979915 - TEC TEC MGP_WSBEiJ_T0098974.1 MGP_WSBEiJ_G0037637.1 mouse_genomes_project 12 28832798 28832931 + Gm25408 snoRNA snoRNA MGP_WSBEiJ_T0033864.1 MGP_WSBEiJ_G0019034.1 mouse_genomes_project 12 32894905 32896581 + MGP_WSBEiJ_P0033864 Prps1l1 protein_coding protein_coding MGP_WSBEiJ_T0009694.1 MGP_WSBEiJ_G0007851.1 mouse_genomes_project 12 111067587 111067707 + Mir1188 miRNA miRNA MGP_WSBEiJ_T0034402.1 MGP_WSBEiJ_G0019243.1 mouse_genomes_project 12 80787329 80963630 + MGP_WSBEiJ_P0034402 Smoc1 protein_coding protein_coding MGP_WSBEiJ_T0034403.1 MGP_WSBEiJ_G0019243.1 mouse_genomes_project 12 80787349 80963626 + MGP_WSBEiJ_P0034403 Smoc1 protein_coding protein_coding MGP_WSBEiJ_T0034404.1 MGP_WSBEiJ_G0019243.1 mouse_genomes_project 12 80787349 80963626 + MGP_WSBEiJ_P0034404 Smoc1 protein_coding protein_coding MGP_WSBEiJ_T0033573.1 MGP_WSBEiJ_G0018930.1 mouse_genomes_project 12 1722996 1732931 + MGP_WSBEiJ_P0033573 BC068281 protein_coding protein_coding MGP_WSBEiJ_T0033574.1 MGP_WSBEiJ_G0018930.1 mouse_genomes_project 12 1730172 1737834 + MGP_WSBEiJ_P0033574 BC068281 protein_coding protein_coding MGP_WSBEiJ_T0003316.1 MGP_WSBEiJ_G0003051.1 mouse_genomes_project 12 31057778 31075399 - antisense antisense MGP_WSBEiJ_T0033984.1 MGP_WSBEiJ_G0019084.1 mouse_genomes_project 12 53250541 53272999 - MGP_WSBEiJ_P0033984 Eapp protein_coding protein_coding MGP_WSBEiJ_T0033985.1 MGP_WSBEiJ_G0019084.1 mouse_genomes_project 12 53250658 53272962 - MGP_WSBEiJ_P0033985 Eapp protein_coding protein_coding MGP_WSBEiJ_T0033986.1 MGP_WSBEiJ_G0019084.1 mouse_genomes_project 12 53262410 53273021 - MGP_WSBEiJ_P0033986 Eapp protein_coding protein_coding MGP_WSBEiJ_T0033987.1 MGP_WSBEiJ_G0019084.1 mouse_genomes_project 12 53266589 53273040 - MGP_WSBEiJ_P0033987 Eapp protein_coding protein_coding MGP_WSBEiJ_T0097764.1 MGP_WSBEiJ_G0036427.1 mouse_genomes_project 12 54630305 54630408 - Gm22296 snRNA snRNA MGP_WSBEiJ_T0033891.1 MGP_WSBEiJ_G0019048.1 mouse_genomes_project 12 35921098 36706271 + MGP_WSBEiJ_P0033891 Dgkb protein_coding protein_coding MGP_WSBEiJ_T0000051.1 MGP_WSBEiJ_G0000041.1 mouse_genomes_project 12 116537687 116537981 + MGP_WSBEiJ_P0000051 Ighv1-13 IG_LV_gene IG_LV_gene MGP_WSBEiJ_T0000106.1 MGP_WSBEiJ_G0000082.1 mouse_genomes_project 12 116841227 116841514 - MGP_WSBEiJ_P0000106 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034437.1 MGP_WSBEiJ_G0019253.1 mouse_genomes_project 12 82002843 82290493 + MGP_WSBEiJ_P0034437 Sipa1l1 protein_coding protein_coding MGP_WSBEiJ_T0034438.1 MGP_WSBEiJ_G0019253.1 mouse_genomes_project 12 82149229 82290493 + MGP_WSBEiJ_P0034438 Sipa1l1 protein_coding protein_coding MGP_WSBEiJ_T0012564.1 MGP_WSBEiJ_G0010694.1 mouse_genomes_project 12 105242340 105243427 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016708.1 MGP_WSBEiJ_G0014650.1 mouse_genomes_project 12 81333747 81353448 + 6530401F13Rik processed_transcript processed_transcript MGP_WSBEiJ_T0097197.1 MGP_WSBEiJ_G0035878.1 mouse_genomes_project 12 106172106 106172381 - Scarna13 scaRNA scaRNA MGP_WSBEiJ_T0006329.1 MGP_WSBEiJ_G0005274.1 mouse_genomes_project 12 70674687 70675734 - 1700083H02Rik lincRNA lincRNA MGP_WSBEiJ_T0009656.1 MGP_WSBEiJ_G0007813.1 mouse_genomes_project 12 76674121 76674189 - Gm22696 miRNA miRNA MGP_WSBEiJ_T0034919.1 MGP_WSBEiJ_G0019389.1 mouse_genomes_project 12 104221699 104227789 + MGP_WSBEiJ_P0034919 Fam181a protein_coding protein_coding MGP_WSBEiJ_T0034920.1 MGP_WSBEiJ_G0019389.1 mouse_genomes_project 12 104225677 104227043 + MGP_WSBEiJ_P0034920 Fam181a protein_coding protein_coding MGP_WSBEiJ_T0034921.1 MGP_WSBEiJ_G0019389.1 mouse_genomes_project 12 104225683 104227789 + MGP_WSBEiJ_P0034921 Fam181a protein_coding protein_coding MGP_WSBEiJ_T0034903.1 MGP_WSBEiJ_G0019386.1 mouse_genomes_project 12 103793112 103794342 + MGP_WSBEiJ_P0034903 Cox8c protein_coding protein_coding MGP_WSBEiJ_T0000257.1 MGP_WSBEiJ_G0000205.1 mouse_genomes_project 12 116841227 116841650 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0033798.1 MGP_WSBEiJ_G0019013.1 mouse_genomes_project 12 29171255 29239708 + MGP_WSBEiJ_P0033798 Slc26a3 protein_coding protein_coding MGP_WSBEiJ_T0033799.1 MGP_WSBEiJ_G0019013.1 mouse_genomes_project 12 29226955 29264751 + MGP_WSBEiJ_P0033799 Slc26a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033800.1 MGP_WSBEiJ_G0019013.1 mouse_genomes_project 12 29226957 29265173 + MGP_WSBEiJ_P0033800 Slc26a3 protein_coding protein_coding MGP_WSBEiJ_T0033801.1 MGP_WSBEiJ_G0019013.1 mouse_genomes_project 12 29226957 29241586 + MGP_WSBEiJ_P0033801 Slc26a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033802.1 MGP_WSBEiJ_G0019013.1 mouse_genomes_project 12 29226971 29241610 + Slc26a3 protein_coding retained_intron MGP_WSBEiJ_T0033803.1 MGP_WSBEiJ_G0019013.1 mouse_genomes_project 12 29236151 29243791 + Slc26a3 protein_coding retained_intron MGP_WSBEiJ_T0033804.1 MGP_WSBEiJ_G0019013.1 mouse_genomes_project 12 29262161 29263107 + MGP_WSBEiJ_P0033804 Slc26a3 protein_coding protein_coding MGP_WSBEiJ_T0098986.1 MGP_WSBEiJ_G0037649.1 mouse_genomes_project 12 49517519 49517636 + Gm22088 snoRNA snoRNA MGP_WSBEiJ_T0097748.1 MGP_WSBEiJ_G0036411.1 mouse_genomes_project 12 1897239 1897342 - Gm23167 snRNA snRNA MGP_WSBEiJ_T0011127.1 MGP_WSBEiJ_G0009284.1 mouse_genomes_project 12 30188286 30188604 - Gm23875 misc_RNA misc_RNA MGP_WSBEiJ_T0034944.1 MGP_WSBEiJ_G0019396.1 mouse_genomes_project 12 104367099 104381003 - MGP_WSBEiJ_P0034944 Ifi27l2b protein_coding protein_coding MGP_WSBEiJ_T0033654.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14017625 14110648 - MGP_WSBEiJ_P0033654 Greb1 protein_coding protein_coding MGP_WSBEiJ_T0033655.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14017625 14159991 - MGP_WSBEiJ_P0033655 Greb1 protein_coding protein_coding MGP_WSBEiJ_T0033656.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14019088 14110602 - MGP_WSBEiJ_P0033656 Greb1 protein_coding protein_coding MGP_WSBEiJ_T0033657.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14020830 14022044 - Greb1 protein_coding retained_intron MGP_WSBEiJ_T0033658.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14031650 14039624 - Greb1 protein_coding retained_intron MGP_WSBEiJ_T0033659.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14039352 14092468 - Greb1 protein_coding retained_intron MGP_WSBEiJ_T0033660.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14053309 14060288 - Greb1 protein_coding retained_intron MGP_WSBEiJ_T0033661.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14058405 14060699 - Greb1 protein_coding retained_intron MGP_WSBEiJ_T0033662.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14058416 14060839 - MGP_WSBEiJ_P0033662 Greb1 protein_coding protein_coding MGP_WSBEiJ_T0033663.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14060150 14064018 - MGP_WSBEiJ_P0033663 Greb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033664.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14075435 14092366 - Greb1 protein_coding retained_intron MGP_WSBEiJ_T0033665.1 MGP_WSBEiJ_G0018965.1 mouse_genomes_project 12 14085511 14160084 - MGP_WSBEiJ_P0033665 Greb1 protein_coding protein_coding MGP_WSBEiJ_T0033872.1 MGP_WSBEiJ_G0019038.1 mouse_genomes_project 12 33929542 33934642 + Agr2 protein_coding retained_intron MGP_WSBEiJ_T0033873.1 MGP_WSBEiJ_G0019038.1 mouse_genomes_project 12 33929542 33941595 + MGP_WSBEiJ_P0033873 Agr2 protein_coding protein_coding MGP_WSBEiJ_T0006359.1 MGP_WSBEiJ_G0005300.1 mouse_genomes_project 12 106062938 106063580 - Gm28875 lincRNA lincRNA MGP_WSBEiJ_T0033754.1 MGP_WSBEiJ_G0018996.1 mouse_genomes_project 12 26293266 26325949 - MGP_WSBEiJ_P0033754 Colec11 protein_coding protein_coding MGP_WSBEiJ_T0034931.1 MGP_WSBEiJ_G0019392.1 mouse_genomes_project 12 104319786 104320785 - MGP_WSBEiJ_P0034931 9330161L09Rik protein_coding protein_coding MGP_WSBEiJ_T0033722.1 MGP_WSBEiJ_G0018984.1 mouse_genomes_project 12 22167373 22178854 + MGP_WSBEiJ_P0033722 Klf11 protein_coding protein_coding MGP_WSBEiJ_T0033723.1 MGP_WSBEiJ_G0018984.1 mouse_genomes_project 12 22167898 22171125 + MGP_WSBEiJ_P0033723 Klf11 protein_coding protein_coding MGP_WSBEiJ_T0033724.1 MGP_WSBEiJ_G0018984.1 mouse_genomes_project 12 22167898 22169796 + MGP_WSBEiJ_P0033724 Klf11 protein_coding protein_coding MGP_WSBEiJ_T0033725.1 MGP_WSBEiJ_G0018984.1 mouse_genomes_project 12 22168155 22171120 + MGP_WSBEiJ_P0033725 Klf11 protein_coding protein_coding MGP_WSBEiJ_T0011145.1 MGP_WSBEiJ_G0009302.1 mouse_genomes_project 12 120948193 120948392 + Gm22537 misc_RNA misc_RNA MGP_WSBEiJ_T0009728.1 MGP_WSBEiJ_G0007885.1 mouse_genomes_project 12 111196474 111196545 + Mir134 miRNA miRNA MGP_WSBEiJ_T0009746.1 MGP_WSBEiJ_G0007903.1 mouse_genomes_project 12 113740683 113740759 + Mir203 miRNA miRNA MGP_WSBEiJ_T0009695.1 MGP_WSBEiJ_G0007852.1 mouse_genomes_project 12 111073824 111073911 + Gm23912 miRNA miRNA MGP_WSBEiJ_T0097784.1 MGP_WSBEiJ_G0036447.1 mouse_genomes_project 12 99230088 99230151 + Gm25486 snRNA snRNA MGP_WSBEiJ_T0009710.1 MGP_WSBEiJ_G0007867.1 mouse_genomes_project 12 111177995 111178116 + Mir1193 miRNA miRNA MGP_WSBEiJ_T0033492.1 MGP_WSBEiJ_G0018912.1 mouse_genomes_project 12 236101 317789 + MGP_WSBEiJ_P0033492 Asxl2 protein_coding protein_coding MGP_WSBEiJ_T0033493.1 MGP_WSBEiJ_G0018912.1 mouse_genomes_project 12 236101 318274 + MGP_WSBEiJ_P0033493 Asxl2 protein_coding protein_coding MGP_WSBEiJ_T0033494.1 MGP_WSBEiJ_G0018912.1 mouse_genomes_project 12 236128 306935 + MGP_WSBEiJ_P0033494 Asxl2 protein_coding protein_coding MGP_WSBEiJ_T0033495.1 MGP_WSBEiJ_G0018912.1 mouse_genomes_project 12 236145 313116 + MGP_WSBEiJ_P0033495 Asxl2 protein_coding protein_coding MGP_WSBEiJ_T0033496.1 MGP_WSBEiJ_G0018912.1 mouse_genomes_project 12 236156 266195 + Asxl2 protein_coding retained_intron MGP_WSBEiJ_T0033497.1 MGP_WSBEiJ_G0018912.1 mouse_genomes_project 12 240105 313022 + MGP_WSBEiJ_P0033497 Asxl2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033498.1 MGP_WSBEiJ_G0018912.1 mouse_genomes_project 12 254318 307060 + MGP_WSBEiJ_P0033498 Asxl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033499.1 MGP_WSBEiJ_G0018912.1 mouse_genomes_project 12 304411 315398 + Asxl2 protein_coding processed_transcript MGP_WSBEiJ_T0000251.1 MGP_WSBEiJ_G0000199.1 mouse_genomes_project 12 116507132 116507569 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0006305.1 MGP_WSBEiJ_G0005257.1 mouse_genomes_project 12 18869435 18871124 + Gm4419 lincRNA lincRNA MGP_WSBEiJ_T0035306.1 MGP_WSBEiJ_G0019527.1 mouse_genomes_project 12 120041582 120234646 - MGP_WSBEiJ_P0035306 Dnah11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035307.1 MGP_WSBEiJ_G0019527.1 mouse_genomes_project 12 120041582 120380728 - MGP_WSBEiJ_P0035307 Dnah11 protein_coding protein_coding MGP_WSBEiJ_T0035308.1 MGP_WSBEiJ_G0019527.1 mouse_genomes_project 12 120065709 120080980 - Dnah11 protein_coding retained_intron MGP_WSBEiJ_T0035309.1 MGP_WSBEiJ_G0019527.1 mouse_genomes_project 12 120065725 120081209 - Dnah11 protein_coding processed_transcript MGP_WSBEiJ_T0000097.1 MGP_WSBEiJ_G0000076.1 mouse_genomes_project 12 116441777 116442280 - MGP_WSBEiJ_P0000097 Ighv1-4 IG_V_gene IG_V_gene MGP_WSBEiJ_T0034785.1 MGP_WSBEiJ_G0019348.1 mouse_genomes_project 12 99058304 99207442 - MGP_WSBEiJ_P0034785 Kcnk10 protein_coding protein_coding MGP_WSBEiJ_T0034363.1 MGP_WSBEiJ_G0019226.1 mouse_genomes_project 12 78789610 78806260 - MGP_WSBEiJ_P0034363 Vti1b protein_coding protein_coding MGP_WSBEiJ_T0034364.1 MGP_WSBEiJ_G0019226.1 mouse_genomes_project 12 78789763 78806041 - MGP_WSBEiJ_P0034364 Vti1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034365.1 MGP_WSBEiJ_G0019226.1 mouse_genomes_project 12 78789922 78798743 - MGP_WSBEiJ_P0034365 Vti1b protein_coding protein_coding MGP_WSBEiJ_T0034366.1 MGP_WSBEiJ_G0019226.1 mouse_genomes_project 12 78790110 78799970 - MGP_WSBEiJ_P0034366 Vti1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033563.1 MGP_WSBEiJ_G0018922.1 mouse_genomes_project 12 1478080 1478182 - MGP_WSBEiJ_P0033563 Gm3625 protein_coding protein_coding MGP_WSBEiJ_T0009718.1 MGP_WSBEiJ_G0007875.1 mouse_genomes_project 12 111186063 111186183 - Gm25252 miRNA miRNA MGP_WSBEiJ_T0000091.1 MGP_WSBEiJ_G0000071.1 mouse_genomes_project 12 116332088 116332545 - MGP_WSBEiJ_P0000091 Ighv6-6 IG_V_gene IG_V_gene MGP_WSBEiJ_T0009732.1 MGP_WSBEiJ_G0007889.1 mouse_genomes_project 12 111200762 111200828 + Mir154 miRNA miRNA MGP_WSBEiJ_T0035147.1 MGP_WSBEiJ_G0019474.1 mouse_genomes_project 12 112982299 112987573 + MGP_WSBEiJ_P0035147 A230065H16Rik protein_coding protein_coding MGP_WSBEiJ_T0034018.1 MGP_WSBEiJ_G0019097.1 mouse_genomes_project 12 54280129 54281795 + MGP_WSBEiJ_P0034018 Aldoart2 protein_coding protein_coding MGP_WSBEiJ_T0033988.1 MGP_WSBEiJ_G0019085.1 mouse_genomes_project 12 53316756 53360248 - MGP_WSBEiJ_P0033988 Snx6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033989.1 MGP_WSBEiJ_G0019085.1 mouse_genomes_project 12 53317642 53360298 - MGP_WSBEiJ_P0033989 Snx6 protein_coding protein_coding MGP_WSBEiJ_T0034683.1 MGP_WSBEiJ_G0019322.1 mouse_genomes_project 12 87231674 87332756 + MGP_WSBEiJ_P0034683 Tmem63c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034684.1 MGP_WSBEiJ_G0019322.1 mouse_genomes_project 12 87236607 87332751 + MGP_WSBEiJ_P0034684 Tmem63c protein_coding protein_coding MGP_WSBEiJ_T0034685.1 MGP_WSBEiJ_G0019322.1 mouse_genomes_project 12 87236879 87332746 + MGP_WSBEiJ_P0034685 Tmem63c protein_coding protein_coding MGP_WSBEiJ_T0034686.1 MGP_WSBEiJ_G0019322.1 mouse_genomes_project 12 87236931 87270727 + MGP_WSBEiJ_P0034686 Tmem63c protein_coding protein_coding MGP_WSBEiJ_T0034687.1 MGP_WSBEiJ_G0019322.1 mouse_genomes_project 12 87248764 87332754 + MGP_WSBEiJ_P0034687 Tmem63c protein_coding protein_coding MGP_WSBEiJ_T0003348.1 MGP_WSBEiJ_G0003078.1 mouse_genomes_project 12 103489720 103495557 + Gm20069 antisense antisense MGP_WSBEiJ_T0006317.1 MGP_WSBEiJ_G0005265.1 mouse_genomes_project 12 30971333 31001984 + Gm16267 lincRNA lincRNA MGP_WSBEiJ_T0097773.1 MGP_WSBEiJ_G0036436.1 mouse_genomes_project 12 69244366 69244469 - Gm23579 snRNA snRNA MGP_WSBEiJ_T0009717.1 MGP_WSBEiJ_G0007874.1 mouse_genomes_project 12 111185765 111185847 + Mir376b miRNA miRNA MGP_WSBEiJ_T0034062.1 MGP_WSBEiJ_G0019115.1 mouse_genomes_project 12 57941570 57948673 + MGP_WSBEiJ_P0034062 Pnn protein_coding protein_coding MGP_WSBEiJ_T0033715.1 MGP_WSBEiJ_G0018980.1 mouse_genomes_project 12 18841617 18869109 - MGP_WSBEiJ_P0033715 Ywhaq protein_coding unknown_likely_coding MGP_WSBEiJ_T0033716.1 MGP_WSBEiJ_G0018980.1 mouse_genomes_project 12 18845843 18868655 - Ywhaq protein_coding processed_transcript MGP_WSBEiJ_T0033717.1 MGP_WSBEiJ_G0018980.1 mouse_genomes_project 12 18846346 18848801 - Ywhaq protein_coding retained_intron MGP_WSBEiJ_T0034896.1 MGP_WSBEiJ_G0019381.1 mouse_genomes_project 12 103629889 103631321 - MGP_WSBEiJ_P0034896 Moap1 protein_coding protein_coding MGP_WSBEiJ_T0034897.1 MGP_WSBEiJ_G0019381.1 mouse_genomes_project 12 103629889 103631305 - MGP_WSBEiJ_P0034897 Moap1 protein_coding protein_coding MGP_WSBEiJ_T0006349.1 MGP_WSBEiJ_G0005290.1 mouse_genomes_project 12 87704385 87704518 - Gm29362 lincRNA lincRNA MGP_WSBEiJ_T0035241.1 MGP_WSBEiJ_G0019506.1 mouse_genomes_project 12 114515321 114525338 - MGP_WSBEiJ_P0035241 Gpr132 protein_coding protein_coding MGP_WSBEiJ_T0000033.1 MGP_WSBEiJ_G0000027.1 mouse_genomes_project 12 115160225 115160279 - MGP_WSBEiJ_P0000033 Ighj4 IG_J_gene IG_J_gene MGP_WSBEiJ_T0009642.1 MGP_WSBEiJ_G0007799.1 mouse_genomes_project 12 35003106 35003207 - Gm44326 miRNA miRNA MGP_WSBEiJ_T0098969.1 MGP_WSBEiJ_G0037632.1 mouse_genomes_project 12 14948888 14949024 + Gm22748 snoRNA snoRNA MGP_WSBEiJ_T0034394.1 MGP_WSBEiJ_G0019241.1 mouse_genomes_project 12 80706694 80711297 + protein_coding retained_intron MGP_WSBEiJ_T0034395.1 MGP_WSBEiJ_G0019241.1 mouse_genomes_project 12 80706706 80711297 + protein_coding retained_intron MGP_WSBEiJ_T0034396.1 MGP_WSBEiJ_G0019241.1 mouse_genomes_project 12 80706708 80708024 + protein_coding processed_transcript MGP_WSBEiJ_T0034397.1 MGP_WSBEiJ_G0019241.1 mouse_genomes_project 12 80706722 80709681 + protein_coding processed_transcript MGP_WSBEiJ_T0034398.1 MGP_WSBEiJ_G0019241.1 mouse_genomes_project 12 80706744 80708705 + MGP_WSBEiJ_P0034398 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034399.1 MGP_WSBEiJ_G0019241.1 mouse_genomes_project 12 80706753 80708147 + protein_coding processed_transcript MGP_WSBEiJ_T0034400.1 MGP_WSBEiJ_G0019241.1 mouse_genomes_project 12 80707551 80711291 + protein_coding retained_intron MGP_WSBEiJ_T0097776.1 MGP_WSBEiJ_G0036439.1 mouse_genomes_project 12 76960496 76960595 + Gm24775 snRNA snRNA MGP_WSBEiJ_T0034609.1 MGP_WSBEiJ_G0019300.1 mouse_genomes_project 12 85309158 85345826 - MGP_WSBEiJ_P0034609 Mlh3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034610.1 MGP_WSBEiJ_G0019300.1 mouse_genomes_project 12 85309175 85345820 - MGP_WSBEiJ_P0034610 Mlh3 protein_coding protein_coding MGP_WSBEiJ_T0034611.1 MGP_WSBEiJ_G0019300.1 mouse_genomes_project 12 85309175 85345793 - MGP_WSBEiJ_P0034611 Mlh3 protein_coding protein_coding MGP_WSBEiJ_T0006363.1 MGP_WSBEiJ_G0005303.1 mouse_genomes_project 12 107728910 107734003 - 1700121N20Rik lincRNA lincRNA MGP_WSBEiJ_T0034932.1 MGP_WSBEiJ_G0019393.1 mouse_genomes_project 12 104320940 104338745 - MGP_WSBEiJ_P0034932 Ddx24 protein_coding protein_coding MGP_WSBEiJ_T0034933.1 MGP_WSBEiJ_G0019393.1 mouse_genomes_project 12 104320940 104338832 - MGP_WSBEiJ_P0034933 Ddx24 protein_coding protein_coding MGP_WSBEiJ_T0034331.1 MGP_WSBEiJ_G0019211.1 mouse_genomes_project 12 76325917 76329133 - MGP_WSBEiJ_P0034331 protein_coding protein_coding MGP_WSBEiJ_T0034375.1 MGP_WSBEiJ_G0019230.1 mouse_genomes_project 12 78943214 79171984 + MGP_WSBEiJ_P0034375 Rad51b protein_coding protein_coding MGP_WSBEiJ_T0034376.1 MGP_WSBEiJ_G0019230.1 mouse_genomes_project 12 78943214 78976643 + MGP_WSBEiJ_P0034376 Rad51b protein_coding protein_coding MGP_WSBEiJ_T0000825.1 MGP_WSBEiJ_G0000764.1 mouse_genomes_project 12 23144641 23184387 - TEC TEC MGP_WSBEiJ_T0034889.1 MGP_WSBEiJ_G0019378.1 mouse_genomes_project 12 103441657 103586923 - MGP_WSBEiJ_P0034889 Itpk1 protein_coding protein_coding MGP_WSBEiJ_T0034890.1 MGP_WSBEiJ_G0019378.1 mouse_genomes_project 12 103441660 103586927 - MGP_WSBEiJ_P0034890 Itpk1 protein_coding protein_coding MGP_WSBEiJ_T0034891.1 MGP_WSBEiJ_G0019378.1 mouse_genomes_project 12 103457362 103471127 - Itpk1 protein_coding processed_transcript MGP_WSBEiJ_T0034892.1 MGP_WSBEiJ_G0019378.1 mouse_genomes_project 12 103464913 103521273 - MGP_WSBEiJ_P0034892 Itpk1 protein_coding protein_coding MGP_WSBEiJ_T0034893.1 MGP_WSBEiJ_G0019378.1 mouse_genomes_project 12 103500413 103586911 - MGP_WSBEiJ_P0034893 Itpk1 protein_coding protein_coding MGP_WSBEiJ_T0012579.1 MGP_WSBEiJ_G0010709.1 mouse_genomes_project 12 116180317 116180968 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0033954.1 MGP_WSBEiJ_G0019066.1 mouse_genomes_project 12 47767602 47768163 + MGP_WSBEiJ_P0033954 Gm9804 protein_coding protein_coding MGP_WSBEiJ_T0033628.1 MGP_WSBEiJ_G0018948.1 mouse_genomes_project 12 6692656 6699751 + MGP_WSBEiJ_P0033628 Osr1 protein_coding protein_coding MGP_WSBEiJ_T0096924.1 MGP_WSBEiJ_G0035605.1 mouse_genomes_project 12 2770615 2770730 + Gm23752 rRNA rRNA MGP_WSBEiJ_T0096929.1 MGP_WSBEiJ_G0035610.1 mouse_genomes_project 12 26760389 26760504 - Gm23342 rRNA rRNA MGP_WSBEiJ_T0034277.1 MGP_WSBEiJ_G0019192.1 mouse_genomes_project 12 74762175 74852405 + MGP_WSBEiJ_P0034277 Rhoj protein_coding protein_coding MGP_WSBEiJ_T0034278.1 MGP_WSBEiJ_G0019192.1 mouse_genomes_project 12 74762175 74855904 + MGP_WSBEiJ_P0034278 Rhoj protein_coding protein_coding MGP_WSBEiJ_T0034279.1 MGP_WSBEiJ_G0019192.1 mouse_genomes_project 12 74762175 74850266 + MGP_WSBEiJ_P0034279 Rhoj protein_coding protein_coding MGP_WSBEiJ_T0034280.1 MGP_WSBEiJ_G0019192.1 mouse_genomes_project 12 74762742 74854663 + MGP_WSBEiJ_P0034280 Rhoj protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099013.1 MGP_WSBEiJ_G0037676.1 mouse_genomes_project 12 111097493 111097566 + Gm24899 snoRNA snoRNA MGP_WSBEiJ_T0033629.1 MGP_WSBEiJ_G0018949.1 mouse_genomes_project 12 7521436 7547518 + MGP_WSBEiJ_P0033629 Nt5c1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033630.1 MGP_WSBEiJ_G0018949.1 mouse_genomes_project 12 7521442 7526404 + MGP_WSBEiJ_P0033630 Nt5c1b protein_coding protein_coding MGP_WSBEiJ_T0033631.1 MGP_WSBEiJ_G0018949.1 mouse_genomes_project 12 7521442 7547521 + MGP_WSBEiJ_P0033631 Nt5c1b protein_coding protein_coding MGP_WSBEiJ_T0033632.1 MGP_WSBEiJ_G0018949.1 mouse_genomes_project 12 7521507 7547518 + MGP_WSBEiJ_P0033632 Nt5c1b protein_coding protein_coding MGP_WSBEiJ_T0034985.1 MGP_WSBEiJ_G0019416.1 mouse_genomes_project 12 105376409 105382590 + MGP_WSBEiJ_P0034985 Serpina3j protein_coding protein_coding MGP_WSBEiJ_T0000312.1 MGP_WSBEiJ_G0000260.1 mouse_genomes_project 12 58137273 58137342 + mt-Ti Mt_tRNA Mt_tRNA MGP_WSBEiJ_T0003318.1 MGP_WSBEiJ_G0003053.1 mouse_genomes_project 12 38339688 38342138 + Gm17056 antisense antisense MGP_WSBEiJ_T0000004.1 MGP_WSBEiJ_G0000003.1 mouse_genomes_project 12 114941157 114946578 - MGP_WSBEiJ_P0000004 Igha IG_C_gene IG_C_gene MGP_WSBEiJ_T0000005.1 MGP_WSBEiJ_G0000003.1 mouse_genomes_project 12 114945043 114946578 - MGP_WSBEiJ_P0000005 Igha IG_C_gene IG_C_gene MGP_WSBEiJ_T0098996.1 MGP_WSBEiJ_G0037659.1 mouse_genomes_project 12 64574695 64574827 + Gm22782 snoRNA snoRNA MGP_WSBEiJ_T0096934.1 MGP_WSBEiJ_G0035615.1 mouse_genomes_project 12 66600395 66600514 - n-R5s60 rRNA rRNA MGP_WSBEiJ_T0034922.1 MGP_WSBEiJ_G0019390.1 mouse_genomes_project 12 104231865 104268527 - MGP_WSBEiJ_P0034922 Asb2 protein_coding protein_coding MGP_WSBEiJ_T0034923.1 MGP_WSBEiJ_G0019390.1 mouse_genomes_project 12 104231869 104246301 - Asb2 protein_coding retained_intron MGP_WSBEiJ_T0034924.1 MGP_WSBEiJ_G0019390.1 mouse_genomes_project 12 104231869 104249090 - MGP_WSBEiJ_P0034924 Asb2 protein_coding protein_coding MGP_WSBEiJ_T0034925.1 MGP_WSBEiJ_G0019390.1 mouse_genomes_project 12 104245585 104247451 - Asb2 protein_coding processed_transcript MGP_WSBEiJ_T0035214.1 MGP_WSBEiJ_G0019495.1 mouse_genomes_project 12 114141146 114153719 - MGP_WSBEiJ_P0035214 Tmem179 protein_coding protein_coding MGP_WSBEiJ_T0034704.1 MGP_WSBEiJ_G0019331.1 mouse_genomes_project 12 87538319 87559270 - MGP_WSBEiJ_P0034704 Ism2 protein_coding protein_coding MGP_WSBEiJ_T0034705.1 MGP_WSBEiJ_G0019331.1 mouse_genomes_project 12 87539363 87546784 - MGP_WSBEiJ_P0034705 Ism2 protein_coding protein_coding MGP_WSBEiJ_T0034706.1 MGP_WSBEiJ_G0019331.1 mouse_genomes_project 12 87542096 87546720 - Ism2 protein_coding processed_transcript MGP_WSBEiJ_T0006312.1 MGP_WSBEiJ_G0005261.1 mouse_genomes_project 12 28243888 28250495 - Gm28806 lincRNA lincRNA MGP_WSBEiJ_T0034619.1 MGP_WSBEiJ_G0019305.1 mouse_genomes_project 12 85530238 85533611 + MGP_WSBEiJ_P0034619 protein_coding protein_coding MGP_WSBEiJ_T0003335.1 MGP_WSBEiJ_G0003066.1 mouse_genomes_project 12 81007353 81022293 + Gm3693 antisense antisense MGP_WSBEiJ_T0035250.1 MGP_WSBEiJ_G0019513.1 mouse_genomes_project 12 114748581 114767086 + MGP_WSBEiJ_P0035250 Tex22 protein_coding protein_coding MGP_WSBEiJ_T0035251.1 MGP_WSBEiJ_G0019513.1 mouse_genomes_project 12 114748581 114767093 + MGP_WSBEiJ_P0035251 Tex22 protein_coding protein_coding MGP_WSBEiJ_T0035252.1 MGP_WSBEiJ_G0019513.1 mouse_genomes_project 12 114748840 114767093 + MGP_WSBEiJ_P0035252 Tex22 protein_coding protein_coding MGP_WSBEiJ_T0035253.1 MGP_WSBEiJ_G0019513.1 mouse_genomes_project 12 114748862 114749456 + MGP_WSBEiJ_P0035253 Tex22 protein_coding protein_coding MGP_WSBEiJ_T0009703.1 MGP_WSBEiJ_G0007860.1 mouse_genomes_project 12 111174124 111174185 + Mir380 miRNA miRNA MGP_WSBEiJ_T0035069.1 MGP_WSBEiJ_G0019450.1 mouse_genomes_project 12 110280859 110290713 - MGP_WSBEiJ_P0035069 Slc25a29 protein_coding protein_coding MGP_WSBEiJ_T0035070.1 MGP_WSBEiJ_G0019450.1 mouse_genomes_project 12 110282210 110286603 - Slc25a29 protein_coding retained_intron MGP_WSBEiJ_T0035071.1 MGP_WSBEiJ_G0019450.1 mouse_genomes_project 12 110285929 110290650 - Slc25a29 protein_coding retained_intron MGP_WSBEiJ_T0006342.1 MGP_WSBEiJ_G0005283.1 mouse_genomes_project 12 80681567 80682585 - 1700052I22Rik lincRNA lincRNA MGP_WSBEiJ_T0033971.1 MGP_WSBEiJ_G0019076.1 mouse_genomes_project 12 50475591 50494802 - MGP_WSBEiJ_P0033971 Dtd2 protein_coding protein_coding MGP_WSBEiJ_T0033972.1 MGP_WSBEiJ_G0019076.1 mouse_genomes_project 12 50485032 50494802 - MGP_WSBEiJ_P0033972 Dtd2 protein_coding protein_coding MGP_WSBEiJ_T0097775.1 MGP_WSBEiJ_G0036438.1 mouse_genomes_project 12 75950072 75950146 - Gm25563 snRNA snRNA MGP_WSBEiJ_T0009636.1 MGP_WSBEiJ_G0007793.1 mouse_genomes_project 12 28217120 28217224 - Gm25865 miRNA miRNA MGP_WSBEiJ_T0034590.1 MGP_WSBEiJ_G0019294.1 mouse_genomes_project 12 85051108 85113698 + MGP_WSBEiJ_P0034590 Ylpm1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034591.1 MGP_WSBEiJ_G0019294.1 mouse_genomes_project 12 85069590 85128664 + MGP_WSBEiJ_P0034591 Ylpm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034592.1 MGP_WSBEiJ_G0019294.1 mouse_genomes_project 12 85098557 85115680 + Ylpm1 protein_coding retained_intron MGP_WSBEiJ_T0034593.1 MGP_WSBEiJ_G0019294.1 mouse_genomes_project 12 85106035 85106967 + Ylpm1 protein_coding retained_intron MGP_WSBEiJ_T0034594.1 MGP_WSBEiJ_G0019294.1 mouse_genomes_project 12 85116303 85128421 + Ylpm1 protein_coding retained_intron MGP_WSBEiJ_T0034595.1 MGP_WSBEiJ_G0019294.1 mouse_genomes_project 12 85121014 85128587 + Ylpm1 protein_coding retained_intron MGP_WSBEiJ_T0033619.1 MGP_WSBEiJ_G0018945.1 mouse_genomes_project 12 6077591 6136249 + MGP_WSBEiJ_P0033619 Wdr35 protein_coding protein_coding MGP_WSBEiJ_T0033620.1 MGP_WSBEiJ_G0018945.1 mouse_genomes_project 12 6077710 6096774 + Wdr35 protein_coding retained_intron MGP_WSBEiJ_T0033621.1 MGP_WSBEiJ_G0018945.1 mouse_genomes_project 12 6077710 6096779 + MGP_WSBEiJ_P0033621 Wdr35 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033622.1 MGP_WSBEiJ_G0018945.1 mouse_genomes_project 12 6077746 6136248 + MGP_WSBEiJ_P0033622 Wdr35 protein_coding protein_coding MGP_WSBEiJ_T0033623.1 MGP_WSBEiJ_G0018945.1 mouse_genomes_project 12 6077758 6129882 + Wdr35 protein_coding retained_intron MGP_WSBEiJ_T0033624.1 MGP_WSBEiJ_G0018945.1 mouse_genomes_project 12 6078568 6090841 + Wdr35 protein_coding retained_intron MGP_WSBEiJ_T0033625.1 MGP_WSBEiJ_G0018945.1 mouse_genomes_project 12 6129488 6131871 + Wdr35 protein_coding retained_intron MGP_WSBEiJ_T0000828.1 MGP_WSBEiJ_G0000767.1 mouse_genomes_project 12 56350649 56355168 + TEC TEC MGP_WSBEiJ_T0033843.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31010683 31239192 + MGP_WSBEiJ_P0033843 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0033844.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31010708 31109876 + MGP_WSBEiJ_P0033844 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0033845.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31010726 31109876 + MGP_WSBEiJ_P0033845 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0033846.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31010769 31236675 + MGP_WSBEiJ_P0033846 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0033847.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31010789 31189547 + MGP_WSBEiJ_P0033847 Atxn7l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033848.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31010820 31192263 + Atxn7l1 protein_coding retained_intron MGP_WSBEiJ_T0033849.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31161168 31231669 + MGP_WSBEiJ_P0033849 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0033850.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31177720 31208337 + MGP_WSBEiJ_P0033850 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0033851.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31177732 31192263 + Atxn7l1 protein_coding retained_intron MGP_WSBEiJ_T0033852.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31177843 31189477 + MGP_WSBEiJ_P0033852 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0033853.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31178840 31235753 + MGP_WSBEiJ_P0033853 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0033854.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31178848 31189618 + Atxn7l1 protein_coding retained_intron MGP_WSBEiJ_T0033855.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31208701 31231674 + Atxn7l1 protein_coding retained_intron MGP_WSBEiJ_T0033856.1 MGP_WSBEiJ_G0019027.1 mouse_genomes_project 12 31230719 31236664 + MGP_WSBEiJ_P0033856 Atxn7l1 protein_coding protein_coding MGP_WSBEiJ_T0034377.1 MGP_WSBEiJ_G0019231.1 mouse_genomes_project 12 79797293 79804825 - MGP_WSBEiJ_P0034377 Zfp36l1 protein_coding protein_coding MGP_WSBEiJ_T0034378.1 MGP_WSBEiJ_G0019231.1 mouse_genomes_project 12 79798707 79804810 - MGP_WSBEiJ_P0034378 Zfp36l1 protein_coding protein_coding MGP_WSBEiJ_T0034379.1 MGP_WSBEiJ_G0019232.1 mouse_genomes_project 12 79869045 79882451 - MGP_WSBEiJ_P0034379 Actn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034380.1 MGP_WSBEiJ_G0019232.1 mouse_genomes_project 12 79870791 79971388 - MGP_WSBEiJ_P0034380 Actn1 protein_coding protein_coding MGP_WSBEiJ_T0034381.1 MGP_WSBEiJ_G0019232.1 mouse_genomes_project 12 79872477 79971108 - MGP_WSBEiJ_P0034381 Actn1 protein_coding protein_coding MGP_WSBEiJ_T0035209.1 MGP_WSBEiJ_G0019491.1 mouse_genomes_project 12 113715022 113737395 + MGP_WSBEiJ_P0035209 Aspg protein_coding protein_coding MGP_WSBEiJ_T0099027.1 MGP_WSBEiJ_G0037690.1 mouse_genomes_project 12 111144205 111144292 + Gm22981 snoRNA snoRNA MGP_WSBEiJ_T0034035.1 MGP_WSBEiJ_G0019106.1 mouse_genomes_project 12 56021088 56031442 + MGP_WSBEiJ_P0034035 Prps1l3 protein_coding protein_coding MGP_WSBEiJ_T0009709.1 MGP_WSBEiJ_G0007866.1 mouse_genomes_project 12 111177901 111177975 + Mir679 miRNA miRNA MGP_WSBEiJ_T0033544.1 MGP_WSBEiJ_G0018917.1 mouse_genomes_project 12 799692 877844 - MGP_WSBEiJ_P0033544 Efr3b protein_coding unknown_likely_coding MGP_WSBEiJ_T0033545.1 MGP_WSBEiJ_G0018917.1 mouse_genomes_project 12 799695 878049 - MGP_WSBEiJ_P0033545 Efr3b protein_coding protein_coding MGP_WSBEiJ_T0012567.1 MGP_WSBEiJ_G0010697.1 mouse_genomes_project 12 107839135 107840618 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009664.1 MGP_WSBEiJ_G0007821.1 mouse_genomes_project 12 89631446 89631588 - Gm27313 miRNA miRNA MGP_WSBEiJ_T0000250.1 MGP_WSBEiJ_G0000198.1 mouse_genomes_project 12 116468924 116469217 - IG_V_pseudogene IG_V_pseudogene MGP_WSBEiJ_T0098981.1 MGP_WSBEiJ_G0037644.1 mouse_genomes_project 12 39549069 39549201 - Gm25497 snoRNA snoRNA MGP_WSBEiJ_T0034995.1 MGP_WSBEiJ_G0019424.1 mouse_genomes_project 12 106001229 106007457 + MGP_WSBEiJ_P0034995 4930408O17Rik protein_coding protein_coding MGP_WSBEiJ_T0012544.1 MGP_WSBEiJ_G0010674.1 mouse_genomes_project 12 78797007 78797435 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009745.1 MGP_WSBEiJ_G0007902.1 mouse_genomes_project 12 113717622 113717682 - Mir3073b miRNA miRNA MGP_WSBEiJ_T0006302.1 MGP_WSBEiJ_G0005254.1 mouse_genomes_project 12 10014421 10020743 + Platr19 lincRNA lincRNA MGP_WSBEiJ_T0034794.1 MGP_WSBEiJ_G0019351.1 mouse_genomes_project 12 99385984 99428004 + MGP_WSBEiJ_P0034794 Zc3h14 protein_coding protein_coding MGP_WSBEiJ_T0034795.1 MGP_WSBEiJ_G0019351.1 mouse_genomes_project 12 99385984 99428004 + MGP_WSBEiJ_P0034795 Zc3h14 protein_coding protein_coding MGP_WSBEiJ_T0034796.1 MGP_WSBEiJ_G0019351.1 mouse_genomes_project 12 99385984 99428004 + MGP_WSBEiJ_P0034796 Zc3h14 protein_coding protein_coding MGP_WSBEiJ_T0034797.1 MGP_WSBEiJ_G0019351.1 mouse_genomes_project 12 99411262 99428004 + MGP_WSBEiJ_P0034797 Zc3h14 protein_coding protein_coding MGP_WSBEiJ_T0034264.1 MGP_WSBEiJ_G0019184.1 mouse_genomes_project 12 72929844 72933126 - MGP_WSBEiJ_P0034264 Tmem30b protein_coding protein_coding MGP_WSBEiJ_T0033626.1 MGP_WSBEiJ_G0018946.1 mouse_genomes_project 12 6137368 6143762 + MGP_WSBEiJ_P0033626 Ttc32 protein_coding protein_coding MGP_WSBEiJ_T0033929.1 MGP_WSBEiJ_G0019057.1 mouse_genomes_project 12 39207247 40179686 + MGP_WSBEiJ_P0033929 Immp2l protein_coding protein_coding MGP_WSBEiJ_T0033930.1 MGP_WSBEiJ_G0019057.1 mouse_genomes_project 12 39207283 39255870 + Immp2l protein_coding retained_intron MGP_WSBEiJ_T0033931.1 MGP_WSBEiJ_G0019057.1 mouse_genomes_project 12 39207284 39300825 + Immp2l protein_coding retained_intron MGP_WSBEiJ_T0033932.1 MGP_WSBEiJ_G0019057.1 mouse_genomes_project 12 39207486 40179340 + MGP_WSBEiJ_P0033932 Immp2l protein_coding protein_coding MGP_WSBEiJ_T0033933.1 MGP_WSBEiJ_G0019057.1 mouse_genomes_project 12 39255296 39300811 + MGP_WSBEiJ_P0033933 Immp2l protein_coding protein_coding MGP_WSBEiJ_T0034267.1 MGP_WSBEiJ_G0019186.1 mouse_genomes_project 12 73313049 73339721 + MGP_WSBEiJ_P0034267 Hif1a protein_coding protein_coding MGP_WSBEiJ_T0034268.1 MGP_WSBEiJ_G0019186.1 mouse_genomes_project 12 73313435 73353168 + MGP_WSBEiJ_P0034268 Hif1a protein_coding protein_coding MGP_WSBEiJ_T0034269.1 MGP_WSBEiJ_G0019186.1 mouse_genomes_project 12 73333216 73335148 + Hif1a protein_coding retained_intron MGP_WSBEiJ_T0034270.1 MGP_WSBEiJ_G0019186.1 mouse_genomes_project 12 73345328 73347532 + Hif1a protein_coding processed_transcript MGP_WSBEiJ_T0034691.1 MGP_WSBEiJ_G0019324.1 mouse_genomes_project 12 87350919 87396354 - MGP_WSBEiJ_P0034691 Pomt2 protein_coding protein_coding MGP_WSBEiJ_T0012535.1 MGP_WSBEiJ_G0010665.1 mouse_genomes_project 12 58160900 58161875 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035303.1 MGP_WSBEiJ_G0019526.1 mouse_genomes_project 12 120005206 120042307 + MGP_WSBEiJ_P0035303 Cdca7l protein_coding protein_coding MGP_WSBEiJ_T0035304.1 MGP_WSBEiJ_G0019526.1 mouse_genomes_project 12 120005575 120037360 + MGP_WSBEiJ_P0035304 Cdca7l protein_coding protein_coding MGP_WSBEiJ_T0035305.1 MGP_WSBEiJ_G0019526.1 mouse_genomes_project 12 120005579 120039232 + MGP_WSBEiJ_P0035305 Cdca7l protein_coding protein_coding MGP_WSBEiJ_T0034961.1 MGP_WSBEiJ_G0019403.1 mouse_genomes_project 12 104662482 104673090 - MGP_WSBEiJ_P0034961 protein_coding protein_coding MGP_WSBEiJ_T0034211.1 MGP_WSBEiJ_G0019166.1 mouse_genomes_project 12 71387809 71389183 - MGP_WSBEiJ_P0034211 Gpr135 protein_coding protein_coding MGP_WSBEiJ_T0035300.1 MGP_WSBEiJ_G0019525.1 mouse_genomes_project 12 119663029 119914524 + MGP_WSBEiJ_P0035300 Rapgef5 protein_coding protein_coding MGP_WSBEiJ_T0035301.1 MGP_WSBEiJ_G0019525.1 mouse_genomes_project 12 119680106 119841276 + MGP_WSBEiJ_P0035301 Rapgef5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035302.1 MGP_WSBEiJ_G0019525.1 mouse_genomes_project 12 119680235 119917285 + MGP_WSBEiJ_P0035302 Rapgef5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0033757.1 MGP_WSBEiJ_G0018999.1 mouse_genomes_project 12 26381027 26387979 + MGP_WSBEiJ_P0033757 Adi1 protein_coding protein_coding MGP_WSBEiJ_T0033758.1 MGP_WSBEiJ_G0018999.1 mouse_genomes_project 12 26381283 26387532 + MGP_WSBEiJ_P0033758 Adi1 protein_coding protein_coding MGP_WSBEiJ_T0033759.1 MGP_WSBEiJ_G0018999.1 mouse_genomes_project 12 26383620 26385547 + Adi1 protein_coding processed_transcript MGP_WSBEiJ_T0033748.1 MGP_WSBEiJ_G0018992.1 mouse_genomes_project 12 24077684 24088292 + MGP_WSBEiJ_P0033748 Cmpk2 protein_coding protein_coding MGP_WSBEiJ_T0098993.1 MGP_WSBEiJ_G0037656.1 mouse_genomes_project 12 64052813 64052899 + Gm25970 snoRNA snoRNA MGP_WSBEiJ_T0006409.1 MGP_WSBEiJ_G0005324.1 mouse_genomes_project 12 112863418 112866013 + A230087F16Rik lincRNA lincRNA MGP_WSBEiJ_T0006410.1 MGP_WSBEiJ_G0005324.1 mouse_genomes_project 12 112863440 112871741 + A230087F16Rik lincRNA lincRNA MGP_WSBEiJ_T0035009.1 MGP_WSBEiJ_G0019431.1 mouse_genomes_project 12 106661149 106701084 + MGP_WSBEiJ_P0035009 D430019H16Rik protein_coding protein_coding MGP_WSBEiJ_T0016705.1 MGP_WSBEiJ_G0014647.1 mouse_genomes_project 12 70600794 70606320 - 4930474H06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0000062.1 MGP_WSBEiJ_G0000050.1 mouse_genomes_project 12 115590663 115591121 - MGP_WSBEiJ_P0000062 Ighv5-12 IG_V_gene IG_V_gene MGP_WSBEiJ_T0012547.1 MGP_WSBEiJ_G0010677.1 mouse_genomes_project 12 81192745 81193057 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0034954.1 MGP_WSBEiJ_G0019400.1 mouse_genomes_project 12 104602601 104609925 - MGP_WSBEiJ_P0034954 Serpina16 protein_coding protein_coding MGP_WSBEiJ_T0034955.1 MGP_WSBEiJ_G0019400.1 mouse_genomes_project 12 104602689 104609250 - MGP_WSBEiJ_P0034955 Serpina16 protein_coding protein_coding MGP_WSBEiJ_T0000022.1 MGP_WSBEiJ_G0000016.1 mouse_genomes_project 12 115039218 115041386 + IG_C_pseudogene IG_C_pseudogene MGP_WSBEiJ_T0012553.1 MGP_WSBEiJ_G0010683.1 mouse_genomes_project 12 87280583 87280698 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096928.1 MGP_WSBEiJ_G0035609.1 mouse_genomes_project 12 25746207 25746345 - Gm25923 rRNA rRNA MGP_WSBEiJ_T0034393.1 MGP_WSBEiJ_G0019240.1 mouse_genomes_project 12 80543801 80638088 + MGP_WSBEiJ_P0034393 Susd6 protein_coding protein_coding MGP_WSBEiJ_T0034578.1 MGP_WSBEiJ_G0019291.1 mouse_genomes_project 12 84926139 84929804 + MGP_WSBEiJ_P0034578 D030025P21Rik protein_coding protein_coding MGP_WSBEiJ_T0098988.1 MGP_WSBEiJ_G0037651.1 mouse_genomes_project 12 55303079 55303211 + Gm25760 snoRNA snoRNA MGP_WSBEiJ_T0033693.1 MGP_WSBEiJ_G0018973.1 mouse_genomes_project 12 14738056 14821522 + MGP_WSBEiJ_P0033693 Nol10 protein_coding protein_coding MGP_WSBEiJ_T0034183.1 MGP_WSBEiJ_G0019156.1 mouse_genomes_project 12 69724068 69739149 + MGP_WSBEiJ_P0034183 Tmx1 protein_coding protein_coding MGP_WSBEiJ_T0034184.1 MGP_WSBEiJ_G0019156.1 mouse_genomes_project 12 69726999 69737362 + MGP_WSBEiJ_P0034184 Tmx1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034185.1 MGP_WSBEiJ_G0019156.1 mouse_genomes_project 12 69730665 69731401 + Tmx1 protein_coding retained_intron MGP_WSBEiJ_T0003325.1 MGP_WSBEiJ_G0003058.1 mouse_genomes_project 12 56255240 56264175 - Gm16246 antisense antisense MGP_WSBEiJ_T0034063.1 MGP_WSBEiJ_G0019116.1 mouse_genomes_project 12 57974707 57989024 + MGP_WSBEiJ_P0034063 Mia2 protein_coding protein_coding MGP_WSBEiJ_T0034064.1 MGP_WSBEiJ_G0019116.1 mouse_genomes_project 12 57974708 57999543 + MGP_WSBEiJ_P0034064 Mia2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0034634.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85946695 85981900 + MGP_WSBEiJ_P0034634 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034635.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85946709 86018077 + MGP_WSBEiJ_P0034635 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034636.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85946743 86007806 + MGP_WSBEiJ_P0034636 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034637.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85946746 86180970 + MGP_WSBEiJ_P0034637 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034638.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85947004 86142337 + MGP_WSBEiJ_P0034638 Ttll5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034639.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85947005 86180418 + MGP_WSBEiJ_P0034639 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034640.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85947014 85993606 + Ttll5 protein_coding processed_transcript MGP_WSBEiJ_T0034641.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85947014 86180969 + MGP_WSBEiJ_P0034641 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034642.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85947021 85966363 + MGP_WSBEiJ_P0034642 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034643.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85947057 85968258 + Ttll5 protein_coding retained_intron MGP_WSBEiJ_T0034644.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85947057 85971889 + MGP_WSBEiJ_P0034644 Ttll5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034645.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85947111 86180969 + MGP_WSBEiJ_P0034645 Ttll5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034646.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 85948520 86180419 + MGP_WSBEiJ_P0034646 Ttll5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0034647.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 86002528 86015540 + Ttll5 protein_coding retained_intron MGP_WSBEiJ_T0034648.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 86036490 86054941 + MGP_WSBEiJ_P0034648 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034649.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 86041709 86180969 + MGP_WSBEiJ_P0034649 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034650.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 86048001 86139084 + MGP_WSBEiJ_P0034650 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034651.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 86060566 86180969 + MGP_WSBEiJ_P0034651 Ttll5 protein_coding protein_coding MGP_WSBEiJ_T0034652.1 MGP_WSBEiJ_G0019311.1 mouse_genomes_project 12 86067154 86189899 + MGP_WSBEiJ_P0034652 Ttll5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009679.1 MGP_WSBEiJ_G0007836.1 mouse_genomes_project 12 111035066 111035149 + Mir493 miRNA miRNA MGP_WSBEiJ_T0003328.1 MGP_WSBEiJ_G0003061.1 mouse_genomes_project 12 69022646 69026868 + 4930512B01Rik antisense antisense MGP_WSBEiJ_T0003329.1 MGP_WSBEiJ_G0003061.1 mouse_genomes_project 12 69022693 69074853 + 4930512B01Rik antisense antisense MGP_WSBEiJ_T0003337.1 MGP_WSBEiJ_G0003068.1 mouse_genomes_project 12 81386222 81389506 + antisense antisense MGP_WSBEiJ_T0034999.1 MGP_WSBEiJ_G0019428.1 mouse_genomes_project 12 106291208 106359103 + MGP_WSBEiJ_P0034999 Tcl1b2 protein_coding protein_coding MGP_WSBEiJ_T0035000.1 MGP_WSBEiJ_G0019428.1 mouse_genomes_project 12 106292213 106359274 + MGP_WSBEiJ_P0035000 Tcl1b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035001.1 MGP_WSBEiJ_G0019428.1 mouse_genomes_project 12 106292227 106359274 + MGP_WSBEiJ_P0035001 Tcl1b2 protein_coding protein_coding MGP_WSBEiJ_T0033696.1 MGP_WSBEiJ_G0018975.1 mouse_genomes_project 12 18602207 18707635 + MGP_WSBEiJ_P0033696 Asap2 protein_coding protein_coding MGP_WSBEiJ_T0033697.1 MGP_WSBEiJ_G0018975.1 mouse_genomes_project 12 18602207 18707635 + MGP_WSBEiJ_P0033697 Asap2 protein_coding protein_coding MGP_WSBEiJ_T0033698.1 MGP_WSBEiJ_G0018975.1 mouse_genomes_project 12 18602207 18707635 + MGP_WSBEiJ_P0033698 Asap2 protein_coding protein_coding MGP_WSBEiJ_T0033699.1 MGP_WSBEiJ_G0018975.1 mouse_genomes_project 12 18602207 18705675 + MGP_WSBEiJ_P0033699 Asap2 protein_coding protein_coding MGP_WSBEiJ_T0033669.1 MGP_WSBEiJ_G0018968.1 mouse_genomes_project 12 14359239 14370581 - Pqlc3 protein_coding retained_intron MGP_WSBEiJ_T0033670.1 MGP_WSBEiJ_G0018968.1 mouse_genomes_project 12 14359239 14370667 - MGP_WSBEiJ_P0033670 Pqlc3 protein_coding protein_coding MGP_WSBEiJ_T0033671.1 MGP_WSBEiJ_G0018968.1 mouse_genomes_project 12 14363515 14370574 - MGP_WSBEiJ_P0033671 Pqlc3 protein_coding protein_coding MGP_WSBEiJ_T0033672.1 MGP_WSBEiJ_G0018968.1 mouse_genomes_project 12 14364064 14370575 - Pqlc3 protein_coding processed_transcript MGP_WSBEiJ_T0033673.1 MGP_WSBEiJ_G0018968.1 mouse_genomes_project 12 14364209 14370665 - MGP_WSBEiJ_P0033673 Pqlc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0033674.1 MGP_WSBEiJ_G0018968.1 mouse_genomes_project 12 14366196 14370957 - Pqlc3 protein_coding processed_transcript MGP_WSBEiJ_T0033675.1 MGP_WSBEiJ_G0018968.1 mouse_genomes_project 12 14366196 14370957 - Pqlc3 protein_coding processed_transcript MGP_WSBEiJ_T0009639.1 MGP_WSBEiJ_G0007796.1 mouse_genomes_project 12 33117357 33117444 - Mir680-3 miRNA miRNA MGP_WSBEiJ_T0096966.1 MGP_WSBEiJ_G0035647.1 mouse_genomes_project 14 115888210 115888333 - n-R5s51 rRNA rRNA MGP_WSBEiJ_T0016812.1 MGP_WSBEiJ_G0014694.1 mouse_genomes_project 14 62192561 62262233 - 4930438E09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0037795.1 MGP_WSBEiJ_G0020421.1 mouse_genomes_project 14 23824495 23862407 + MGP_WSBEiJ_P0037795 Rft1 protein_coding protein_coding MGP_WSBEiJ_T0037796.1 MGP_WSBEiJ_G0020421.1 mouse_genomes_project 14 23824510 23831488 + Rft1 protein_coding processed_transcript MGP_WSBEiJ_T0037797.1 MGP_WSBEiJ_G0020421.1 mouse_genomes_project 14 23824518 23833529 + Rft1 protein_coding processed_transcript MGP_WSBEiJ_T0037798.1 MGP_WSBEiJ_G0020421.1 mouse_genomes_project 14 23824522 23834702 + Rft1 protein_coding retained_intron MGP_WSBEiJ_T0037799.1 MGP_WSBEiJ_G0020421.1 mouse_genomes_project 14 23824542 23862407 + MGP_WSBEiJ_P0037799 Rft1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037800.1 MGP_WSBEiJ_G0020421.1 mouse_genomes_project 14 23824542 23862407 + MGP_WSBEiJ_P0037800 Rft1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037801.1 MGP_WSBEiJ_G0020421.1 mouse_genomes_project 14 23853206 23861044 + Rft1 protein_coding processed_transcript MGP_WSBEiJ_T0037567.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13799970 13821065 - MGP_WSBEiJ_P0037567 Ap3m1 protein_coding protein_coding MGP_WSBEiJ_T0037568.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13799987 13803095 - Ap3m1 protein_coding processed_transcript MGP_WSBEiJ_T0037569.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13800062 13803309 - Ap3m1 protein_coding processed_transcript MGP_WSBEiJ_T0037570.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13804542 13820837 - MGP_WSBEiJ_P0037570 Ap3m1 protein_coding protein_coding MGP_WSBEiJ_T0037571.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13806760 13820802 - MGP_WSBEiJ_P0037571 Ap3m1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037572.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13806804 13821078 - Ap3m1 protein_coding processed_transcript MGP_WSBEiJ_T0037573.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13809607 13820692 - Ap3m1 protein_coding processed_transcript MGP_WSBEiJ_T0037574.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13809634 13821123 - MGP_WSBEiJ_P0037574 Ap3m1 protein_coding protein_coding MGP_WSBEiJ_T0037575.1 MGP_WSBEiJ_G0020366.1 mouse_genomes_project 14 13813271 13820735 - MGP_WSBEiJ_P0037575 Ap3m1 protein_coding protein_coding MGP_WSBEiJ_T0099106.1 MGP_WSBEiJ_G0037769.1 mouse_genomes_project 14 65170773 65170883 - Gm22725 snoRNA snoRNA MGP_WSBEiJ_T0097847.1 MGP_WSBEiJ_G0036510.1 mouse_genomes_project 14 44852001 44852105 + Gm24689 snRNA snRNA MGP_WSBEiJ_T0039351.1 MGP_WSBEiJ_G0020926.1 mouse_genomes_project 14 95095609 95107757 - MGP_WSBEiJ_P0039351 Mzt1 protein_coding protein_coding MGP_WSBEiJ_T0037813.1 MGP_WSBEiJ_G0020424.1 mouse_genomes_project 14 24055791 24058145 + MGP_WSBEiJ_P0037813 Mustn1 protein_coding protein_coding MGP_WSBEiJ_T0038142.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39208313 39274151 - MGP_WSBEiJ_P0038142 Ddhd1 protein_coding protein_coding MGP_WSBEiJ_T0038143.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39208624 39237465 - Ddhd1 protein_coding retained_intron MGP_WSBEiJ_T0038144.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39209788 39274106 - MGP_WSBEiJ_P0038144 Ddhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038145.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39209788 39274106 - MGP_WSBEiJ_P0038145 Ddhd1 protein_coding protein_coding MGP_WSBEiJ_T0038146.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39209859 39239375 - Ddhd1 protein_coding retained_intron MGP_WSBEiJ_T0038147.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39210078 39217932 - MGP_WSBEiJ_P0038147 Ddhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038148.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39210471 39236922 - MGP_WSBEiJ_P0038148 Ddhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038149.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39210561 39274150 - MGP_WSBEiJ_P0038149 Ddhd1 protein_coding protein_coding MGP_WSBEiJ_T0038150.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39220217 39224574 - Ddhd1 protein_coding retained_intron MGP_WSBEiJ_T0038151.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39236847 39273409 - Ddhd1 protein_coding processed_transcript MGP_WSBEiJ_T0038152.1 MGP_WSBEiJ_G0020525.1 mouse_genomes_project 14 39244539 39273426 - Ddhd1 protein_coding retained_intron MGP_WSBEiJ_T0037549.1 MGP_WSBEiJ_G0020355.1 mouse_genomes_project 14 13301791 13360276 - MGP_WSBEiJ_P0037549 Usp54 protein_coding protein_coding MGP_WSBEiJ_T0037550.1 MGP_WSBEiJ_G0020355.1 mouse_genomes_project 14 13301791 13371390 - MGP_WSBEiJ_P0037550 Usp54 protein_coding protein_coding MGP_WSBEiJ_T0037551.1 MGP_WSBEiJ_G0020355.1 mouse_genomes_project 14 13329935 13338816 - MGP_WSBEiJ_P0037551 Usp54 protein_coding protein_coding MGP_WSBEiJ_T0037552.1 MGP_WSBEiJ_G0020355.1 mouse_genomes_project 14 13333924 13358378 - Usp54 protein_coding retained_intron MGP_WSBEiJ_T0037553.1 MGP_WSBEiJ_G0020355.1 mouse_genomes_project 14 13335980 13371390 - Usp54 protein_coding retained_intron MGP_WSBEiJ_T0038034.1 MGP_WSBEiJ_G0020476.1 mouse_genomes_project 14 27289484 27299625 + MGP_WSBEiJ_P0038034 Rbp3 protein_coding protein_coding MGP_WSBEiJ_T0038721.1 MGP_WSBEiJ_G0020678.1 mouse_genomes_project 14 49948914 49951655 - MGP_WSBEiJ_P0038721 Tinf2 protein_coding protein_coding MGP_WSBEiJ_T0099076.1 MGP_WSBEiJ_G0037739.1 mouse_genomes_project 14 3696151 3696283 + Gm25466 snoRNA snoRNA MGP_WSBEiJ_T0038733.1 MGP_WSBEiJ_G0020683.1 mouse_genomes_project 14 50025312 50029727 - MGP_WSBEiJ_P0038733 Cideb protein_coding protein_coding MGP_WSBEiJ_T0038734.1 MGP_WSBEiJ_G0020683.1 mouse_genomes_project 14 50025925 50029648 - Cideb protein_coding retained_intron MGP_WSBEiJ_T0003495.1 MGP_WSBEiJ_G0003178.1 mouse_genomes_project 14 58830326 58833784 - Gm17116 antisense antisense MGP_WSBEiJ_T0099100.1 MGP_WSBEiJ_G0037763.1 mouse_genomes_project 14 57273699 57273831 - Gm23816 snoRNA snoRNA MGP_WSBEiJ_T0037855.1 MGP_WSBEiJ_G0020433.1 mouse_genomes_project 14 24283828 24325915 - MGP_WSBEiJ_P0037855 Smim4 protein_coding protein_coding MGP_WSBEiJ_T0037856.1 MGP_WSBEiJ_G0020433.1 mouse_genomes_project 14 24284355 24325935 - MGP_WSBEiJ_P0037856 Smim4 protein_coding protein_coding MGP_WSBEiJ_T0037857.1 MGP_WSBEiJ_G0020433.1 mouse_genomes_project 14 24321704 24325860 - MGP_WSBEiJ_P0037857 Smim4 protein_coding protein_coding MGP_WSBEiJ_T0037858.1 MGP_WSBEiJ_G0020433.1 mouse_genomes_project 14 24322001 24325952 - MGP_WSBEiJ_P0037858 Smim4 protein_coding protein_coding MGP_WSBEiJ_T0037453.1 MGP_WSBEiJ_G0020325.1 mouse_genomes_project 14 6864751 6865848 + MGP_WSBEiJ_P0037453 Olfr721-ps1 protein_coding protein_coding MGP_WSBEiJ_T0037454.1 MGP_WSBEiJ_G0020325.1 mouse_genomes_project 14 6864873 6865848 + MGP_WSBEiJ_P0037454 Olfr721-ps1 protein_coding protein_coding MGP_WSBEiJ_T0037511.1 MGP_WSBEiJ_G0020341.1 mouse_genomes_project 14 12529257 12542530 - MGP_WSBEiJ_P0037511 2700060E02Rik protein_coding protein_coding MGP_WSBEiJ_T0012695.1 MGP_WSBEiJ_G0010825.1 mouse_genomes_project 14 18716503 18716750 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097854.1 MGP_WSBEiJ_G0036517.1 mouse_genomes_project 14 55920992 55921096 - Gm25716 snRNA snRNA MGP_WSBEiJ_T0038284.1 MGP_WSBEiJ_G0020567.1 mouse_genomes_project 14 44322223 44323159 + MGP_WSBEiJ_P0038284 Olfr740 protein_coding protein_coding MGP_WSBEiJ_T0002558.1 MGP_WSBEiJ_G0002460.1 mouse_genomes_project 14 46841659 46842185 + MGP_WSBEiJ_P0002558 Trav4-2 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002601.1 MGP_WSBEiJ_G0002494.1 mouse_genomes_project 14 48083857 48084628 + MGP_WSBEiJ_P0002601 Trav21-dv12 TR_V_gene TR_V_gene MGP_WSBEiJ_T0039138.1 MGP_WSBEiJ_G0020848.1 mouse_genomes_project 14 65119203 65178051 - MGP_WSBEiJ_P0039138 Piwil2 protein_coding protein_coding MGP_WSBEiJ_T0038390.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46262428 46313724 + MGP_WSBEiJ_P0038390 Rpgrip1 protein_coding protein_coding MGP_WSBEiJ_T0038391.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46262628 46312860 + MGP_WSBEiJ_P0038391 Rpgrip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038392.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46262647 46272402 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038393.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46262654 46311866 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038394.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46262664 46313756 + MGP_WSBEiJ_P0038394 Rpgrip1 protein_coding protein_coding MGP_WSBEiJ_T0038395.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46263916 46312632 + MGP_WSBEiJ_P0038395 Rpgrip1 protein_coding protein_coding MGP_WSBEiJ_T0038396.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46266313 46286501 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038397.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46270496 46271069 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038398.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46272624 46292253 + MGP_WSBEiJ_P0038398 Rpgrip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038399.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46288202 46300938 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038400.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46288247 46313755 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038401.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46296997 46300840 + MGP_WSBEiJ_P0038401 Rpgrip1 protein_coding protein_coding MGP_WSBEiJ_T0038402.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46297057 46302057 + MGP_WSBEiJ_P0038402 Rpgrip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038403.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46298631 46301033 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038404.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46301054 46312710 + MGP_WSBEiJ_P0038404 Rpgrip1 protein_coding protein_coding MGP_WSBEiJ_T0038405.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46301137 46302277 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038406.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46302003 46312554 + MGP_WSBEiJ_P0038406 Rpgrip1 protein_coding protein_coding MGP_WSBEiJ_T0038407.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46303595 46307632 + Rpgrip1 protein_coding retained_intron MGP_WSBEiJ_T0038408.1 MGP_WSBEiJ_G0020604.1 mouse_genomes_project 14 46310893 46315969 + MGP_WSBEiJ_P0038408 Rpgrip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0002548.1 MGP_WSBEiJ_G0002453.1 mouse_genomes_project 14 46597538 46598495 + MGP_WSBEiJ_P0002548 Trav1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002549.1 MGP_WSBEiJ_G0002453.1 mouse_genomes_project 14 46597577 46598495 + MGP_WSBEiJ_P0002549 Trav1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0016833.1 MGP_WSBEiJ_G0014703.1 mouse_genomes_project 14 112752319 112840520 - Gm20713 processed_transcript processed_transcript MGP_WSBEiJ_T0096963.1 MGP_WSBEiJ_G0035644.1 mouse_genomes_project 14 83639331 83639431 + Gm26405 rRNA rRNA MGP_WSBEiJ_T0037772.1 MGP_WSBEiJ_G0020416.1 mouse_genomes_project 14 23149688 23181103 + MGP_WSBEiJ_P0037772 Chdh protein_coding protein_coding MGP_WSBEiJ_T0037773.1 MGP_WSBEiJ_G0020416.1 mouse_genomes_project 14 23149836 23167846 + Chdh protein_coding processed_transcript MGP_WSBEiJ_T0037774.1 MGP_WSBEiJ_G0020416.1 mouse_genomes_project 14 23163300 23178886 + MGP_WSBEiJ_P0037774 Chdh protein_coding protein_coding MGP_WSBEiJ_T0037838.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24212801 24316056 + MGP_WSBEiJ_P0037838 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037839.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24212801 24318777 + MGP_WSBEiJ_P0037839 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037840.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24212812 24221203 + MGP_WSBEiJ_P0037840 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037841.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24212820 24278295 + MGP_WSBEiJ_P0037841 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037842.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24212833 24316122 + MGP_WSBEiJ_P0037842 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037843.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24212840 24221171 + MGP_WSBEiJ_P0037843 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037844.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24212862 24226674 + Pbrm1 protein_coding processed_transcript MGP_WSBEiJ_T0037845.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24212871 24316274 + MGP_WSBEiJ_P0037845 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037846.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24219179 24316121 + MGP_WSBEiJ_P0037846 Pbrm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037847.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24219179 24311100 + MGP_WSBEiJ_P0037847 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037848.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24219182 24316122 + MGP_WSBEiJ_P0037848 Pbrm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037849.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24219182 24316102 + MGP_WSBEiJ_P0037849 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037850.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24219182 24317206 + MGP_WSBEiJ_P0037850 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037851.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24219182 24316103 + MGP_WSBEiJ_P0037851 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037852.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24219183 24317226 + MGP_WSBEiJ_P0037852 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037853.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24221150 24280741 + MGP_WSBEiJ_P0037853 Pbrm1 protein_coding protein_coding MGP_WSBEiJ_T0037854.1 MGP_WSBEiJ_G0020432.1 mouse_genomes_project 14 24279900 24283737 + Pbrm1 protein_coding retained_intron MGP_WSBEiJ_T0038451.1 MGP_WSBEiJ_G0020610.1 mouse_genomes_project 14 46472543 46477698 - Sall2 protein_coding processed_transcript MGP_WSBEiJ_T0038452.1 MGP_WSBEiJ_G0020610.1 mouse_genomes_project 14 46472543 46489905 - MGP_WSBEiJ_P0038452 Sall2 protein_coding protein_coding MGP_WSBEiJ_T0097878.1 MGP_WSBEiJ_G0036541.1 mouse_genomes_project 14 111885360 111885466 - Gm24073 snRNA snRNA MGP_WSBEiJ_T0002595.1 MGP_WSBEiJ_G0002490.1 mouse_genomes_project 14 47990902 47992121 + MGP_WSBEiJ_P0002595 B230359F08Rik TR_V_gene TR_V_gene MGP_WSBEiJ_T0009823.1 MGP_WSBEiJ_G0007980.1 mouse_genomes_project 14 20468010 20468129 - Gm23633 miRNA miRNA MGP_WSBEiJ_T0038916.1 MGP_WSBEiJ_G0020763.1 mouse_genomes_project 14 57632362 57640282 - MGP_WSBEiJ_P0038916 Defb48 protein_coding protein_coding MGP_WSBEiJ_T0099091.1 MGP_WSBEiJ_G0037754.1 mouse_genomes_project 14 46213126 46213196 + Gm22354 snoRNA snoRNA MGP_WSBEiJ_T0097871.1 MGP_WSBEiJ_G0036534.1 mouse_genomes_project 14 100899692 100899799 + Gm22021 snRNA snRNA MGP_WSBEiJ_T0097851.1 MGP_WSBEiJ_G0036514.1 mouse_genomes_project 14 51232148 51232207 - Gm27635 snRNA snRNA MGP_WSBEiJ_T0039036.1 MGP_WSBEiJ_G0020810.1 mouse_genomes_project 14 61623358 61694804 - MGP_WSBEiJ_P0039036 Dpysl2 protein_coding protein_coding MGP_WSBEiJ_T0002473.1 MGP_WSBEiJ_G0002383.1 mouse_genomes_project 14 48374729 48374790 + MGP_WSBEiJ_P0002473 Traj44 TR_J_gene TR_J_gene MGP_WSBEiJ_T0006592.1 MGP_WSBEiJ_G0005451.1 mouse_genomes_project 14 44739121 44739359 - Rprl1 lincRNA lincRNA MGP_WSBEiJ_T0006618.1 MGP_WSBEiJ_G0005469.1 mouse_genomes_project 14 64240388 64249470 - Gm27174 lincRNA lincRNA MGP_WSBEiJ_T0038523.1 MGP_WSBEiJ_G0020635.1 mouse_genomes_project 14 48851794 48859095 + MGP_WSBEiJ_P0038523 Gm17606 protein_coding protein_coding MGP_WSBEiJ_T0039420.1 MGP_WSBEiJ_G0020947.1 mouse_genomes_project 14 100785698 100831208 - MGP_WSBEiJ_P0039420 Rnf219 protein_coding protein_coding MGP_WSBEiJ_T0003487.1 MGP_WSBEiJ_G0003172.1 mouse_genomes_project 14 51917040 51921132 - Ift88os antisense antisense MGP_WSBEiJ_T0039441.1 MGP_WSBEiJ_G0020958.1 mouse_genomes_project 14 112004908 112041426 + Gpc5 protein_coding retained_intron MGP_WSBEiJ_T0039442.1 MGP_WSBEiJ_G0020958.1 mouse_genomes_project 14 112004943 113504366 + MGP_WSBEiJ_P0039442 Gpc5 protein_coding protein_coding MGP_WSBEiJ_T0039443.1 MGP_WSBEiJ_G0020958.1 mouse_genomes_project 14 112004965 112332260 + MGP_WSBEiJ_P0039443 Gpc5 protein_coding protein_coding MGP_WSBEiJ_T0039444.1 MGP_WSBEiJ_G0020958.1 mouse_genomes_project 14 112005319 113503624 + MGP_WSBEiJ_P0039444 Gpc5 protein_coding protein_coding MGP_WSBEiJ_T0003459.1 MGP_WSBEiJ_G0003148.1 mouse_genomes_project 14 18769357 18782932 - Anxa11os antisense antisense MGP_WSBEiJ_T0037726.1 MGP_WSBEiJ_G0020398.1 mouse_genomes_project 14 19619022 19671759 + MGP_WSBEiJ_P0037726 Dennd6a protein_coding protein_coding MGP_WSBEiJ_T0037727.1 MGP_WSBEiJ_G0020398.1 mouse_genomes_project 14 19619039 19677684 + MGP_WSBEiJ_P0037727 Dennd6a protein_coding protein_coding MGP_WSBEiJ_T0003470.1 MGP_WSBEiJ_G0003159.1 mouse_genomes_project 14 40027470 40031159 + antisense antisense MGP_WSBEiJ_T0038482.1 MGP_WSBEiJ_G0020621.1 mouse_genomes_project 14 48560715 48565467 + Oxa1l protein_coding retained_intron MGP_WSBEiJ_T0038483.1 MGP_WSBEiJ_G0020621.1 mouse_genomes_project 14 48560715 48570571 + MGP_WSBEiJ_P0038483 Oxa1l protein_coding protein_coding MGP_WSBEiJ_T0038484.1 MGP_WSBEiJ_G0020621.1 mouse_genomes_project 14 48560919 48567933 + Oxa1l protein_coding retained_intron MGP_WSBEiJ_T0099093.1 MGP_WSBEiJ_G0037756.1 mouse_genomes_project 14 46438059 46438149 + Gm23758 snoRNA snoRNA MGP_WSBEiJ_T0012755.1 MGP_WSBEiJ_G0010885.1 mouse_genomes_project 14 119750552 119751191 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038989.1 MGP_WSBEiJ_G0020796.1 mouse_genomes_project 14 60571715 60583697 + MGP_WSBEiJ_P0038989 Pbk protein_coding protein_coding MGP_WSBEiJ_T0038990.1 MGP_WSBEiJ_G0020796.1 mouse_genomes_project 14 60571815 60578983 + Pbk protein_coding processed_transcript MGP_WSBEiJ_T0038991.1 MGP_WSBEiJ_G0020796.1 mouse_genomes_project 14 60572110 60579749 + MGP_WSBEiJ_P0038991 Pbk protein_coding protein_coding MGP_WSBEiJ_T0009844.1 MGP_WSBEiJ_G0008001.1 mouse_genomes_project 14 59307702 59307789 + Mir3078 miRNA miRNA MGP_WSBEiJ_T0038871.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55170348 55231139 + MGP_WSBEiJ_P0038871 Spata13 protein_coding protein_coding MGP_WSBEiJ_T0038872.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55171081 55231180 + MGP_WSBEiJ_P0038872 Spata13 protein_coding protein_coding MGP_WSBEiJ_T0038873.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55171102 55230665 + Spata13 protein_coding processed_transcript MGP_WSBEiJ_T0038874.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55230592 55307486 + MGP_WSBEiJ_P0038874 Spata13 protein_coding protein_coding MGP_WSBEiJ_T0038875.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55231746 55249477 + MGP_WSBEiJ_P0038875 Spata13 protein_coding protein_coding MGP_WSBEiJ_T0038876.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55242871 55246788 + Spata13 protein_coding processed_transcript MGP_WSBEiJ_T0038877.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55246646 55292995 + MGP_WSBEiJ_P0038877 Spata13 protein_coding protein_coding MGP_WSBEiJ_T0038878.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55274017 55307475 + MGP_WSBEiJ_P0038878 Spata13 protein_coding protein_coding MGP_WSBEiJ_T0038879.1 MGP_WSBEiJ_G0020744.1 mouse_genomes_project 14 55294055 55305592 + Spata13 protein_coding retained_intron MGP_WSBEiJ_T0099114.1 MGP_WSBEiJ_G0037777.1 mouse_genomes_project 14 86828012 86828126 - Gm23225 snoRNA snoRNA MGP_WSBEiJ_T0037468.1 MGP_WSBEiJ_G0020330.1 mouse_genomes_project 14 8763372 8827497 + MGP_WSBEiJ_P0037468 Ngly1 protein_coding protein_coding MGP_WSBEiJ_T0037469.1 MGP_WSBEiJ_G0020330.1 mouse_genomes_project 14 8763419 8799221 + Ngly1 protein_coding retained_intron MGP_WSBEiJ_T0037470.1 MGP_WSBEiJ_G0020330.1 mouse_genomes_project 14 8796898 8799344 + Ngly1 protein_coding retained_intron MGP_WSBEiJ_T0012688.1 MGP_WSBEiJ_G0010818.1 mouse_genomes_project 14 10662484 10663362 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039037.1 MGP_WSBEiJ_G0020811.1 mouse_genomes_project 14 61694965 61697108 + MGP_WSBEiJ_P0039037 Gm5464 protein_coding protein_coding MGP_WSBEiJ_T0002598.1 MGP_WSBEiJ_G0002492.1 mouse_genomes_project 14 48036218 48036944 + MGP_WSBEiJ_P0002598 Trav18 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002599.1 MGP_WSBEiJ_G0002492.1 mouse_genomes_project 14 48036218 48036944 + MGP_WSBEiJ_P0002599 Trav18 TR_V_gene TR_V_gene MGP_WSBEiJ_T0099079.1 MGP_WSBEiJ_G0037742.1 mouse_genomes_project 14 12945933 12946050 - Gm24912 snoRNA snoRNA MGP_WSBEiJ_T0038032.1 MGP_WSBEiJ_G0020474.1 mouse_genomes_project 14 27258201 27271074 + MGP_WSBEiJ_P0038032 Gdf10 protein_coding protein_coding MGP_WSBEiJ_T0038553.1 MGP_WSBEiJ_G0020640.1 mouse_genomes_project 14 49076612 49084383 - MGP_WSBEiJ_P0038553 Homez protein_coding protein_coding MGP_WSBEiJ_T0038554.1 MGP_WSBEiJ_G0020640.1 mouse_genomes_project 14 49077663 49088673 - MGP_WSBEiJ_P0038554 Homez protein_coding protein_coding MGP_WSBEiJ_T0038555.1 MGP_WSBEiJ_G0020640.1 mouse_genomes_project 14 49079443 49081089 - MGP_WSBEiJ_P0038555 Homez protein_coding protein_coding MGP_WSBEiJ_T0038556.1 MGP_WSBEiJ_G0020640.1 mouse_genomes_project 14 49081800 49096199 - MGP_WSBEiJ_P0038556 Homez protein_coding protein_coding MGP_WSBEiJ_T0006634.1 MGP_WSBEiJ_G0005482.1 mouse_genomes_project 14 115411474 115444434 + 1700044C05Rik lincRNA lincRNA MGP_WSBEiJ_T0039355.1 MGP_WSBEiJ_G0020929.1 mouse_genomes_project 14 95160545 95326544 + MGP_WSBEiJ_P0039355 protein_coding protein_coding MGP_WSBEiJ_T0097865.1 MGP_WSBEiJ_G0036528.1 mouse_genomes_project 14 93963823 93963987 - Gm25831 snRNA snRNA MGP_WSBEiJ_T0003462.1 MGP_WSBEiJ_G0003151.1 mouse_genomes_project 14 23940699 23947983 - 1700087M22Rik antisense antisense MGP_WSBEiJ_T0037964.1 MGP_WSBEiJ_G0020455.1 mouse_genomes_project 14 25405994 25425371 + MGP_WSBEiJ_P0037964 protein_coding protein_coding MGP_WSBEiJ_T0012750.1 MGP_WSBEiJ_G0010880.1 mouse_genomes_project 14 110376311 110376753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039151.1 MGP_WSBEiJ_G0020856.1 mouse_genomes_project 14 65336005 65340732 + MGP_WSBEiJ_P0039151 Nudt18 protein_coding protein_coding MGP_WSBEiJ_T0039102.1 MGP_WSBEiJ_G0020836.1 mouse_genomes_project 14 64421414 64440789 - MGP_WSBEiJ_P0039102 Chmp7 protein_coding protein_coding MGP_WSBEiJ_T0038325.1 MGP_WSBEiJ_G0020587.1 mouse_genomes_project 14 45036909 45048908 + MGP_WSBEiJ_P0038325 protein_coding protein_coding MGP_WSBEiJ_T0038327.1 MGP_WSBEiJ_G0020587.1 mouse_genomes_project 14 45041740 45048908 + MGP_WSBEiJ_P0038327 protein_coding protein_coding MGP_WSBEiJ_T0099103.1 MGP_WSBEiJ_G0037766.1 mouse_genomes_project 14 61806071 61806204 + Gm24258 snoRNA snoRNA MGP_WSBEiJ_T0002604.1 MGP_WSBEiJ_G0002496.1 mouse_genomes_project 14 48143449 48144037 + MGP_WSBEiJ_P0002604 Trdv2-1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002605.1 MGP_WSBEiJ_G0002496.1 mouse_genomes_project 14 48143449 48144037 + MGP_WSBEiJ_P0002605 Trdv2-1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0037734.1 MGP_WSBEiJ_G0020400.1 mouse_genomes_project 14 19705707 19715679 - MGP_WSBEiJ_P0037734 Pde12 protein_coding protein_coding MGP_WSBEiJ_T0006633.1 MGP_WSBEiJ_G0005481.1 mouse_genomes_project 14 115409328 115430214 + Gm26791 lincRNA lincRNA MGP_WSBEiJ_T0038794.1 MGP_WSBEiJ_G0020720.1 mouse_genomes_project 14 51935057 51954274 + MGP_WSBEiJ_P0038794 Il17d protein_coding protein_coding MGP_WSBEiJ_T0002590.1 MGP_WSBEiJ_G0002486.1 mouse_genomes_project 14 47340914 47346084 + MGP_WSBEiJ_P0002590 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002586.1 MGP_WSBEiJ_G0002483.1 mouse_genomes_project 14 47092684 47093305 + MGP_WSBEiJ_P0002586 TR_V_gene TR_V_gene MGP_WSBEiJ_T0037999.1 MGP_WSBEiJ_G0020466.1 mouse_genomes_project 14 26127686 26130509 + MGP_WSBEiJ_P0037999 Fam170b protein_coding protein_coding MGP_WSBEiJ_T0006601.1 MGP_WSBEiJ_G0005457.1 mouse_genomes_project 14 50132237 50143836 - Gm26751 lincRNA lincRNA MGP_WSBEiJ_T0037619.1 MGP_WSBEiJ_G0020373.1 mouse_genomes_project 14 14653608 14657160 - MGP_WSBEiJ_P0037619 Comtd1 protein_coding protein_coding MGP_WSBEiJ_T0037620.1 MGP_WSBEiJ_G0020373.1 mouse_genomes_project 14 14653737 14657182 - Comtd1 protein_coding retained_intron MGP_WSBEiJ_T0037621.1 MGP_WSBEiJ_G0020373.1 mouse_genomes_project 14 14653743 14656097 - Comtd1 protein_coding retained_intron MGP_WSBEiJ_T0012726.1 MGP_WSBEiJ_G0010856.1 mouse_genomes_project 14 54655828 54656176 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038574.1 MGP_WSBEiJ_G0020646.1 mouse_genomes_project 14 49149006 49160069 - MGP_WSBEiJ_P0038574 Efs protein_coding protein_coding MGP_WSBEiJ_T0002535.1 MGP_WSBEiJ_G0002443.1 mouse_genomes_project 14 48421602 48421631 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0006609.1 MGP_WSBEiJ_G0005464.1 mouse_genomes_project 14 56810178 56812600 - Gm26969 lincRNA lincRNA MGP_WSBEiJ_T0002528.1 MGP_WSBEiJ_G0002436.1 mouse_genomes_project 14 48357102 48357156 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0039416.1 MGP_WSBEiJ_G0020945.1 mouse_genomes_project 14 100100306 100131358 - MGP_WSBEiJ_P0039416 Ednrb protein_coding protein_coding MGP_WSBEiJ_T0039417.1 MGP_WSBEiJ_G0020945.1 mouse_genomes_project 14 100100307 100130881 - MGP_WSBEiJ_P0039417 Ednrb protein_coding protein_coding MGP_WSBEiJ_T0006576.1 MGP_WSBEiJ_G0005439.1 mouse_genomes_project 14 25730606 25749099 + Gm2990 lincRNA lincRNA MGP_WSBEiJ_T0039296.1 MGP_WSBEiJ_G0020902.1 mouse_genomes_project 14 73538637 73586502 - MGP_WSBEiJ_P0039296 Akap11 protein_coding protein_coding MGP_WSBEiJ_T0039297.1 MGP_WSBEiJ_G0020902.1 mouse_genomes_project 14 73538637 73586554 - MGP_WSBEiJ_P0039297 Akap11 protein_coding protein_coding MGP_WSBEiJ_T0038563.1 MGP_WSBEiJ_G0020643.1 mouse_genomes_project 14 49116183 49130914 + MGP_WSBEiJ_P0038563 Gm20521 protein_coding protein_coding MGP_WSBEiJ_T0038286.1 MGP_WSBEiJ_G0020569.1 mouse_genomes_project 14 44516484 44517588 + MGP_WSBEiJ_P0038286 Olfr744 protein_coding protein_coding MGP_WSBEiJ_T0038520.1 MGP_WSBEiJ_G0020632.1 mouse_genomes_project 14 48836358 48840522 + MGP_WSBEiJ_P0038520 Psmb11 protein_coding protein_coding MGP_WSBEiJ_T0003477.1 MGP_WSBEiJ_G0003165.1 mouse_genomes_project 14 49208253 49210564 + Mhrt antisense antisense MGP_WSBEiJ_T0003478.1 MGP_WSBEiJ_G0003165.1 mouse_genomes_project 14 49208362 49215025 + Mhrt antisense antisense MGP_WSBEiJ_T0009862.1 MGP_WSBEiJ_G0008019.1 mouse_genomes_project 14 111952085 111952181 + Mir18 miRNA miRNA MGP_WSBEiJ_T0002588.1 MGP_WSBEiJ_G0002485.1 mouse_genomes_project 14 47329735 47330293 + MGP_WSBEiJ_P0002588 TR_V_gene TR_V_gene MGP_WSBEiJ_T0099088.1 MGP_WSBEiJ_G0037751.1 mouse_genomes_project 14 30048432 30048555 + Gm24394 snoRNA snoRNA MGP_WSBEiJ_T0037991.1 MGP_WSBEiJ_G0020461.1 mouse_genomes_project 14 25728001 25730415 - MGP_WSBEiJ_P0037991 Slc18a3 protein_coding protein_coding MGP_WSBEiJ_T0038435.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46456137 46466587 - MGP_WSBEiJ_P0038435 Mettl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038436.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46456310 46466632 - MGP_WSBEiJ_P0038436 Mettl3 protein_coding protein_coding MGP_WSBEiJ_T0038437.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46456318 46461806 - MGP_WSBEiJ_P0038437 Mettl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038438.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46456326 46458131 - Mettl3 protein_coding retained_intron MGP_WSBEiJ_T0038439.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46456326 46458213 - MGP_WSBEiJ_P0038439 Mettl3 protein_coding protein_coding MGP_WSBEiJ_T0038440.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46456326 46458214 - MGP_WSBEiJ_P0038440 Mettl3 protein_coding protein_coding MGP_WSBEiJ_T0038441.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46456972 46466628 - MGP_WSBEiJ_P0038441 Mettl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038442.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46457172 46458224 - Mettl3 protein_coding retained_intron MGP_WSBEiJ_T0038443.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46458122 46459919 - Mettl3 protein_coding retained_intron MGP_WSBEiJ_T0038444.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46458452 46461234 - Mettl3 protein_coding retained_intron MGP_WSBEiJ_T0038445.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46458667 46466590 - MGP_WSBEiJ_P0038445 Mettl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038446.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46458932 46466491 - MGP_WSBEiJ_P0038446 Mettl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038447.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46459487 46466491 - MGP_WSBEiJ_P0038447 Mettl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038448.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46459497 46466611 - MGP_WSBEiJ_P0038448 Mettl3 protein_coding protein_coding MGP_WSBEiJ_T0038449.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46461813 46466603 - MGP_WSBEiJ_P0038449 Mettl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038450.1 MGP_WSBEiJ_G0020609.1 mouse_genomes_project 14 46465146 46466628 - Mettl3 protein_coding retained_intron MGP_WSBEiJ_T0039459.1 MGP_WSBEiJ_G0020967.1 mouse_genomes_project 14 115938616 115990075 - MGP_WSBEiJ_P0039459 Dzip1 protein_coding protein_coding MGP_WSBEiJ_T0039460.1 MGP_WSBEiJ_G0020967.1 mouse_genomes_project 14 115939204 115992223 - MGP_WSBEiJ_P0039460 Dzip1 protein_coding protein_coding MGP_WSBEiJ_T0039144.1 MGP_WSBEiJ_G0020852.1 mouse_genomes_project 14 65277247 65280399 - MGP_WSBEiJ_P0039144 Sftpc protein_coding protein_coding MGP_WSBEiJ_T0006588.1 MGP_WSBEiJ_G0005449.1 mouse_genomes_project 14 42455999 42589707 + Otx2os1 lincRNA lincRNA MGP_WSBEiJ_T0006589.1 MGP_WSBEiJ_G0005449.1 mouse_genomes_project 14 42456895 42511314 + Otx2os1 lincRNA lincRNA MGP_WSBEiJ_T0006590.1 MGP_WSBEiJ_G0005449.1 mouse_genomes_project 14 42457000 42508661 + Otx2os1 lincRNA lincRNA MGP_WSBEiJ_T0039439.1 MGP_WSBEiJ_G0020956.1 mouse_genomes_project 14 108476507 108486277 + MGP_WSBEiJ_P0039439 Slitrk5 protein_coding protein_coding MGP_WSBEiJ_T0096959.1 MGP_WSBEiJ_G0035640.1 mouse_genomes_project 14 68813863 68813969 - Gm22164 rRNA rRNA MGP_WSBEiJ_T0006595.1 MGP_WSBEiJ_G0005453.1 mouse_genomes_project 14 45360251 45365508 + Gm21718 lincRNA lincRNA MGP_WSBEiJ_T0006596.1 MGP_WSBEiJ_G0005453.1 mouse_genomes_project 14 45361564 45366517 + Gm21718 lincRNA lincRNA MGP_WSBEiJ_T0038613.1 MGP_WSBEiJ_G0020658.1 mouse_genomes_project 14 49736877 49747327 + MGP_WSBEiJ_P0038613 Dhrs4 protein_coding protein_coding MGP_WSBEiJ_T0038038.1 MGP_WSBEiJ_G0020480.1 mouse_genomes_project 14 27384309 27411480 + MGP_WSBEiJ_P0038038 Antxrl protein_coding protein_coding MGP_WSBEiJ_T0012707.1 MGP_WSBEiJ_G0010837.1 mouse_genomes_project 14 38711314 38711662 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039360.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97621417 97806065 - MGP_WSBEiJ_P0039360 Tbc1d4 protein_coding protein_coding MGP_WSBEiJ_T0039361.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97621425 97648507 - Tbc1d4 protein_coding retained_intron MGP_WSBEiJ_T0039362.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97621425 97694432 - MGP_WSBEiJ_P0039362 Tbc1d4 protein_coding protein_coding MGP_WSBEiJ_T0039363.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97622780 97805518 - MGP_WSBEiJ_P0039363 Tbc1d4 protein_coding protein_coding MGP_WSBEiJ_T0039364.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97647855 97805864 - Tbc1d4 protein_coding retained_intron MGP_WSBEiJ_T0039365.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97648077 97805699 - Tbc1d4 protein_coding retained_intron MGP_WSBEiJ_T0039366.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97648077 97805699 - Tbc1d4 protein_coding retained_intron MGP_WSBEiJ_T0039367.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97648246 97688223 - MGP_WSBEiJ_P0039367 Tbc1d4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039368.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97648257 97806223 - MGP_WSBEiJ_P0039368 Tbc1d4 protein_coding protein_coding MGP_WSBEiJ_T0039369.1 MGP_WSBEiJ_G0020933.1 mouse_genomes_project 14 97691812 97694376 - Tbc1d4 protein_coding retained_intron MGP_WSBEiJ_T0037764.1 MGP_WSBEiJ_G0020412.1 mouse_genomes_project 14 22144341 22159763 + MGP_WSBEiJ_P0037764 Lrtm1 protein_coding protein_coding MGP_WSBEiJ_T0037837.1 MGP_WSBEiJ_G0020431.1 mouse_genomes_project 14 24206097 24212753 - MGP_WSBEiJ_P0037837 Gnl3 protein_coding protein_coding MGP_WSBEiJ_T0002479.1 MGP_WSBEiJ_G0002389.1 mouse_genomes_project 14 48381538 48381600 + MGP_WSBEiJ_P0002479 Traj38 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038821.1 MGP_WSBEiJ_G0020726.1 mouse_genomes_project 14 52254754 52257261 + MGP_WSBEiJ_P0038821 Mrpl57 protein_coding protein_coding MGP_WSBEiJ_T0002534.1 MGP_WSBEiJ_G0002442.1 mouse_genomes_project 14 48412691 48412728 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0002486.1 MGP_WSBEiJ_G0002396.1 mouse_genomes_project 14 48391473 48391532 + MGP_WSBEiJ_P0002486 Traj30 TR_J_gene TR_J_gene MGP_WSBEiJ_T0009826.1 MGP_WSBEiJ_G0007983.1 mouse_genomes_project 14 28272716 28272814 + Mir346 miRNA miRNA MGP_WSBEiJ_T0099101.1 MGP_WSBEiJ_G0037764.1 mouse_genomes_project 14 57304331 57304490 + Gm25162 snoRNA snoRNA MGP_WSBEiJ_T0038156.1 MGP_WSBEiJ_G0020527.1 mouse_genomes_project 14 40022666 40032540 - MGP_WSBEiJ_P0038156 Bmp4 protein_coding protein_coding MGP_WSBEiJ_T0038157.1 MGP_WSBEiJ_G0020527.1 mouse_genomes_project 14 40022852 40032421 - MGP_WSBEiJ_P0038157 Bmp4 protein_coding protein_coding MGP_WSBEiJ_T0038158.1 MGP_WSBEiJ_G0020527.1 mouse_genomes_project 14 40026947 40032406 - Bmp4 protein_coding retained_intron MGP_WSBEiJ_T0097857.1 MGP_WSBEiJ_G0036520.1 mouse_genomes_project 14 66947176 66947310 + Gm23735 snRNA snRNA MGP_WSBEiJ_T0038117.1 MGP_WSBEiJ_G0020514.1 mouse_genomes_project 14 34725367 34738321 - MGP_WSBEiJ_P0038117 Sftpd protein_coding protein_coding MGP_WSBEiJ_T0038101.1 MGP_WSBEiJ_G0020507.1 mouse_genomes_project 14 34443955 34505753 - MGP_WSBEiJ_P0038101 Tspan14 protein_coding protein_coding MGP_WSBEiJ_T0099112.1 MGP_WSBEiJ_G0037775.1 mouse_genomes_project 14 85352451 85352580 + Gm25415 snoRNA snoRNA MGP_WSBEiJ_T0039452.1 MGP_WSBEiJ_G0020963.1 mouse_genomes_project 14 115275060 115278857 - MGP_WSBEiJ_P0039452 Sox21 protein_coding protein_coding MGP_WSBEiJ_T0038519.1 MGP_WSBEiJ_G0020631.1 mouse_genomes_project 14 48825355 48829323 - MGP_WSBEiJ_P0038519 Psmb5 protein_coding protein_coding MGP_WSBEiJ_T0039290.1 MGP_WSBEiJ_G0020899.1 mouse_genomes_project 14 72922441 73025290 + MGP_WSBEiJ_P0039290 Epsti1 protein_coding protein_coding MGP_WSBEiJ_T0039291.1 MGP_WSBEiJ_G0020899.1 mouse_genomes_project 14 72922609 72986607 + MGP_WSBEiJ_P0039291 Epsti1 protein_coding protein_coding MGP_WSBEiJ_T0038995.1 MGP_WSBEiJ_G0020798.1 mouse_genomes_project 14 60603152 60635740 + MGP_WSBEiJ_P0038995 Ccdc25 protein_coding protein_coding MGP_WSBEiJ_T0038308.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44864560 44868182 - MGP_WSBEiJ_P0038308 Tmem55b protein_coding protein_coding MGP_WSBEiJ_T0038309.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44864565 44868204 - MGP_WSBEiJ_P0038309 Tmem55b protein_coding protein_coding MGP_WSBEiJ_T0038310.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44864567 44868199 - Tmem55b protein_coding retained_intron MGP_WSBEiJ_T0038311.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44865216 44866560 - MGP_WSBEiJ_P0038311 Tmem55b protein_coding protein_coding MGP_WSBEiJ_T0038312.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44866176 44868151 - MGP_WSBEiJ_P0038312 Tmem55b protein_coding protein_coding MGP_WSBEiJ_T0038313.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44866272 44868181 - Tmem55b protein_coding retained_intron MGP_WSBEiJ_T0038314.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44866374 44867114 - Tmem55b protein_coding retained_intron MGP_WSBEiJ_T0038315.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44866608 44868186 - Tmem55b protein_coding retained_intron MGP_WSBEiJ_T0038316.1 MGP_WSBEiJ_G0020580.1 mouse_genomes_project 14 44866685 44868148 - Tmem55b protein_coding retained_intron MGP_WSBEiJ_T0038915.1 MGP_WSBEiJ_G0020762.1 mouse_genomes_project 14 57476806 57611327 + MGP_WSBEiJ_P0038915 Wdfy2 protein_coding protein_coding MGP_WSBEiJ_T0038170.1 MGP_WSBEiJ_G0020532.1 mouse_genomes_project 14 40544796 40785045 + MGP_WSBEiJ_P0038170 Samd4 protein_coding protein_coding MGP_WSBEiJ_T0038171.1 MGP_WSBEiJ_G0020532.1 mouse_genomes_project 14 40544907 40787694 + MGP_WSBEiJ_P0038171 Samd4 protein_coding protein_coding MGP_WSBEiJ_T0038172.1 MGP_WSBEiJ_G0020532.1 mouse_genomes_project 14 40545448 40546543 + Samd4 protein_coding processed_transcript MGP_WSBEiJ_T0038173.1 MGP_WSBEiJ_G0020532.1 mouse_genomes_project 14 40546072 40787688 + MGP_WSBEiJ_P0038173 Samd4 protein_coding protein_coding MGP_WSBEiJ_T0038174.1 MGP_WSBEiJ_G0020532.1 mouse_genomes_project 14 40678220 40680132 + Samd4 protein_coding processed_transcript MGP_WSBEiJ_T0038175.1 MGP_WSBEiJ_G0020532.1 mouse_genomes_project 14 40693007 40787701 + MGP_WSBEiJ_P0038175 Samd4 protein_coding protein_coding MGP_WSBEiJ_T0038176.1 MGP_WSBEiJ_G0020532.1 mouse_genomes_project 14 40769064 40771025 + Samd4 protein_coding processed_transcript MGP_WSBEiJ_T0012745.1 MGP_WSBEiJ_G0010875.1 mouse_genomes_project 14 95472788 95473129 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038256.1 MGP_WSBEiJ_G0020549.1 mouse_genomes_project 14 43111443 43348824 - MGP_WSBEiJ_P0038256 Slc35f4 protein_coding protein_coding MGP_WSBEiJ_T0038257.1 MGP_WSBEiJ_G0020549.1 mouse_genomes_project 14 43117389 43128245 - Slc35f4 protein_coding processed_transcript MGP_WSBEiJ_T0038258.1 MGP_WSBEiJ_G0020549.1 mouse_genomes_project 14 43126125 43349266 - MGP_WSBEiJ_P0038258 Slc35f4 protein_coding protein_coding MGP_WSBEiJ_T0038259.1 MGP_WSBEiJ_G0020549.1 mouse_genomes_project 14 43131080 43349073 - Slc35f4 protein_coding retained_intron MGP_WSBEiJ_T0037692.1 MGP_WSBEiJ_G0020391.1 mouse_genomes_project 14 18855400 18868602 + protein_coding processed_transcript MGP_WSBEiJ_T0037694.1 MGP_WSBEiJ_G0020391.1 mouse_genomes_project 14 18856128 18870005 + MGP_WSBEiJ_P0037694 protein_coding protein_coding MGP_WSBEiJ_T0038061.1 MGP_WSBEiJ_G0020492.1 mouse_genomes_project 14 27885766 27949487 - MGP_WSBEiJ_P0038061 Ldb3 protein_coding protein_coding MGP_WSBEiJ_T0038062.1 MGP_WSBEiJ_G0020492.1 mouse_genomes_project 14 27885766 27949413 - MGP_WSBEiJ_P0038062 Ldb3 protein_coding protein_coding MGP_WSBEiJ_T0038063.1 MGP_WSBEiJ_G0020492.1 mouse_genomes_project 14 27885766 27949487 - MGP_WSBEiJ_P0038063 Ldb3 protein_coding protein_coding MGP_WSBEiJ_T0038064.1 MGP_WSBEiJ_G0020492.1 mouse_genomes_project 14 27885766 27949487 - MGP_WSBEiJ_P0038064 Ldb3 protein_coding protein_coding MGP_WSBEiJ_T0038065.1 MGP_WSBEiJ_G0020492.1 mouse_genomes_project 14 27922113 27949487 - MGP_WSBEiJ_P0038065 Ldb3 protein_coding protein_coding MGP_WSBEiJ_T0037808.1 MGP_WSBEiJ_G0020423.1 mouse_genomes_project 14 23999276 24053523 + MGP_WSBEiJ_P0037808 Tmem110 protein_coding protein_coding MGP_WSBEiJ_T0037809.1 MGP_WSBEiJ_G0020423.1 mouse_genomes_project 14 23999280 24051107 + MGP_WSBEiJ_P0037809 Tmem110 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037810.1 MGP_WSBEiJ_G0020423.1 mouse_genomes_project 14 24042977 24051501 + Tmem110 protein_coding processed_transcript MGP_WSBEiJ_T0037811.1 MGP_WSBEiJ_G0020423.1 mouse_genomes_project 14 24047043 24049089 + Tmem110 protein_coding retained_intron MGP_WSBEiJ_T0037812.1 MGP_WSBEiJ_G0020423.1 mouse_genomes_project 14 24048891 24051537 + Tmem110 protein_coding retained_intron MGP_WSBEiJ_T0039418.1 MGP_WSBEiJ_G0020946.1 mouse_genomes_project 14 100767051 100775221 - MGP_WSBEiJ_P0039418 Pou4f1 protein_coding protein_coding MGP_WSBEiJ_T0039419.1 MGP_WSBEiJ_G0020946.1 mouse_genomes_project 14 100769344 100770640 - Pou4f1 protein_coding processed_transcript MGP_WSBEiJ_T0038109.1 MGP_WSBEiJ_G0020509.1 mouse_genomes_project 14 34598643 34615522 - MGP_WSBEiJ_P0038109 protein_coding protein_coding MGP_WSBEiJ_T0012752.1 MGP_WSBEiJ_G0010882.1 mouse_genomes_project 14 115218418 115218898 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016784.1 MGP_WSBEiJ_G0014685.1 mouse_genomes_project 14 12217917 12221511 + processed_transcript processed_transcript MGP_WSBEiJ_T0016786.1 MGP_WSBEiJ_G0014685.1 mouse_genomes_project 14 12218024 12222410 + processed_transcript processed_transcript MGP_WSBEiJ_T0009859.1 MGP_WSBEiJ_G0008016.1 mouse_genomes_project 14 101939493 101939622 - Mir6390 miRNA miRNA MGP_WSBEiJ_T0099129.1 MGP_WSBEiJ_G0037792.1 mouse_genomes_project 14 105083637 105083755 + Gm24229 snoRNA snoRNA MGP_WSBEiJ_T0012722.1 MGP_WSBEiJ_G0010852.1 mouse_genomes_project 14 51153617 51153790 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038260.1 MGP_WSBEiJ_G0020550.1 mouse_genomes_project 14 43500562 43617850 - MGP_WSBEiJ_P0038260 3632451O06Rik protein_coding protein_coding MGP_WSBEiJ_T0038261.1 MGP_WSBEiJ_G0020550.1 mouse_genomes_project 14 43500670 43617838 - MGP_WSBEiJ_P0038261 3632451O06Rik protein_coding protein_coding MGP_WSBEiJ_T0038262.1 MGP_WSBEiJ_G0020550.1 mouse_genomes_project 14 43556193 43580297 - 3632451O06Rik protein_coding processed_transcript MGP_WSBEiJ_T0003489.1 MGP_WSBEiJ_G0003174.1 mouse_genomes_project 14 55866946 55879802 - 1700109G14Rik antisense antisense MGP_WSBEiJ_T0003490.1 MGP_WSBEiJ_G0003174.1 mouse_genomes_project 14 55868636 55895956 - 1700109G14Rik antisense antisense MGP_WSBEiJ_T0003491.1 MGP_WSBEiJ_G0003174.1 mouse_genomes_project 14 55879292 55879776 - 1700109G14Rik antisense antisense MGP_WSBEiJ_T0038118.1 MGP_WSBEiJ_G0020515.1 mouse_genomes_project 14 37362756 37363194 + MGP_WSBEiJ_P0038118 protein_coding protein_coding MGP_WSBEiJ_T0038096.1 MGP_WSBEiJ_G0020505.1 mouse_genomes_project 14 31852315 33016330 - MGP_WSBEiJ_P0038096 Nrg3 protein_coding protein_coding MGP_WSBEiJ_T0038097.1 MGP_WSBEiJ_G0020505.1 mouse_genomes_project 14 31853840 33016067 - MGP_WSBEiJ_P0038097 Nrg3 protein_coding protein_coding MGP_WSBEiJ_T0038098.1 MGP_WSBEiJ_G0020505.1 mouse_genomes_project 14 31853856 33016069 - MGP_WSBEiJ_P0038098 Nrg3 protein_coding protein_coding MGP_WSBEiJ_T0038099.1 MGP_WSBEiJ_G0020505.1 mouse_genomes_project 14 32516742 33015917 - Nrg3 protein_coding retained_intron MGP_WSBEiJ_T0037949.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25332527 25339846 + MGP_WSBEiJ_P0037949 Oxnad1 protein_coding protein_coding MGP_WSBEiJ_T0037950.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25332529 25344714 + MGP_WSBEiJ_P0037950 Oxnad1 protein_coding protein_coding MGP_WSBEiJ_T0037951.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25332566 25351357 + MGP_WSBEiJ_P0037951 Oxnad1 protein_coding protein_coding MGP_WSBEiJ_T0037952.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25332940 25347801 + MGP_WSBEiJ_P0037952 Oxnad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037953.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25332964 25351357 + MGP_WSBEiJ_P0037953 Oxnad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037954.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25332979 25347670 + MGP_WSBEiJ_P0037954 Oxnad1 protein_coding protein_coding MGP_WSBEiJ_T0037955.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25332987 25348212 + Oxnad1 protein_coding retained_intron MGP_WSBEiJ_T0037956.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25332987 25344794 + MGP_WSBEiJ_P0037956 Oxnad1 protein_coding protein_coding MGP_WSBEiJ_T0037957.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25333030 25344754 + MGP_WSBEiJ_P0037957 Oxnad1 protein_coding protein_coding MGP_WSBEiJ_T0037958.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25343568 25350810 + MGP_WSBEiJ_P0037958 Oxnad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037959.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25343631 25351007 + MGP_WSBEiJ_P0037959 Oxnad1 protein_coding protein_coding MGP_WSBEiJ_T0037960.1 MGP_WSBEiJ_G0020452.1 mouse_genomes_project 14 25348987 25350437 + Oxnad1 protein_coding retained_intron MGP_WSBEiJ_T0039067.1 MGP_WSBEiJ_G0020819.1 mouse_genomes_project 14 62635593 62822622 - MGP_WSBEiJ_P0039067 Dock5 protein_coding protein_coding MGP_WSBEiJ_T0097492.1 MGP_WSBEiJ_G0036159.1 mouse_genomes_project 14 62554469 62556399 - Gm20667 sense_overlapping sense_overlapping MGP_WSBEiJ_T0016838.1 MGP_WSBEiJ_G0014706.1 mouse_genomes_project 14 119325468 119329990 - A330035P11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016839.1 MGP_WSBEiJ_G0014706.1 mouse_genomes_project 14 119327412 119330011 - A330035P11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0039292.1 MGP_WSBEiJ_G0020900.1 mouse_genomes_project 14 73108468 73116472 - MGP_WSBEiJ_P0039292 Fam216b protein_coding protein_coding MGP_WSBEiJ_T0039293.1 MGP_WSBEiJ_G0020900.1 mouse_genomes_project 14 73109157 73116464 - MGP_WSBEiJ_P0039293 Fam216b protein_coding protein_coding MGP_WSBEiJ_T0039294.1 MGP_WSBEiJ_G0020900.1 mouse_genomes_project 14 73110187 73116446 - MGP_WSBEiJ_P0039294 Fam216b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038899.1 MGP_WSBEiJ_G0020755.1 mouse_genomes_project 14 56192928 56197346 + MGP_WSBEiJ_P0038899 Kcnrg protein_coding protein_coding MGP_WSBEiJ_T0038768.1 MGP_WSBEiJ_G0020709.1 mouse_genomes_project 14 50925868 51016829 + MGP_WSBEiJ_P0038768 Parp4 protein_coding protein_coding MGP_WSBEiJ_T0038769.1 MGP_WSBEiJ_G0020709.1 mouse_genomes_project 14 51012272 51016827 + Parp4 protein_coding retained_intron MGP_WSBEiJ_T0037440.1 MGP_WSBEiJ_G0020317.1 mouse_genomes_project 14 6126830 6138997 + MGP_WSBEiJ_P0037440 Sntn protein_coding protein_coding MGP_WSBEiJ_T0012718.1 MGP_WSBEiJ_G0010848.1 mouse_genomes_project 14 48532822 48533506 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012733.1 MGP_WSBEiJ_G0010863.1 mouse_genomes_project 14 69620495 69636026 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039370.1 MGP_WSBEiJ_G0020934.1 mouse_genomes_project 14 97833993 97840916 - MGP_WSBEiJ_P0039370 Commd6 protein_coding protein_coding MGP_WSBEiJ_T0039371.1 MGP_WSBEiJ_G0020934.1 mouse_genomes_project 14 97833994 97840701 - MGP_WSBEiJ_P0039371 Commd6 protein_coding protein_coding MGP_WSBEiJ_T0039372.1 MGP_WSBEiJ_G0020934.1 mouse_genomes_project 14 97840285 97840916 - Commd6 protein_coding retained_intron MGP_WSBEiJ_T0037629.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16150499 16679158 - MGP_WSBEiJ_P0037629 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037630.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16150499 16679158 - MGP_WSBEiJ_P0037630 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037631.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16159746 16679158 - MGP_WSBEiJ_P0037631 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037632.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16159746 16679158 - MGP_WSBEiJ_P0037632 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037633.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16159746 16679158 - MGP_WSBEiJ_P0037633 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037634.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16160433 16892918 - MGP_WSBEiJ_P0037634 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037635.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16160446 16893571 - MGP_WSBEiJ_P0037635 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037636.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16160446 16517096 - MGP_WSBEiJ_P0037636 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037637.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16160446 16679158 - MGP_WSBEiJ_P0037637 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037638.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16161629 16892690 - MGP_WSBEiJ_P0037638 Kcnma1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037639.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16161629 16892918 - MGP_WSBEiJ_P0037639 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037640.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16161759 16892838 - MGP_WSBEiJ_P0037640 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037641.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16172179 16679158 - MGP_WSBEiJ_P0037641 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037642.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16172179 16679158 - MGP_WSBEiJ_P0037642 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0037643.1 MGP_WSBEiJ_G0020376.1 mouse_genomes_project 14 16891356 16893011 - MGP_WSBEiJ_P0037643 Kcnma1 protein_coding protein_coding MGP_WSBEiJ_T0006636.1 MGP_WSBEiJ_G0005484.1 mouse_genomes_project 14 116847439 116849779 + 1700006F04Rik lincRNA lincRNA MGP_WSBEiJ_T0037464.1 MGP_WSBEiJ_G0020329.1 mouse_genomes_project 14 8752760 8763901 - MGP_WSBEiJ_P0037464 Oxsm protein_coding protein_coding MGP_WSBEiJ_T0037465.1 MGP_WSBEiJ_G0020329.1 mouse_genomes_project 14 8754019 8757436 - MGP_WSBEiJ_P0037465 Oxsm protein_coding protein_coding MGP_WSBEiJ_T0037466.1 MGP_WSBEiJ_G0020329.1 mouse_genomes_project 14 8754738 8763269 - MGP_WSBEiJ_P0037466 Oxsm protein_coding protein_coding MGP_WSBEiJ_T0037467.1 MGP_WSBEiJ_G0020329.1 mouse_genomes_project 14 8756277 8763267 - MGP_WSBEiJ_P0037467 Oxsm protein_coding protein_coding MGP_WSBEiJ_T0002508.1 MGP_WSBEiJ_G0002418.1 mouse_genomes_project 14 48416539 48416601 + MGP_WSBEiJ_P0002508 Traj5 TR_J_gene TR_J_gene MGP_WSBEiJ_T0037873.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24369283 24381124 - MGP_WSBEiJ_P0037873 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037874.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24369617 24387399 - MGP_WSBEiJ_P0037874 protein_coding protein_coding MGP_WSBEiJ_T0037875.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24369725 24372642 - MGP_WSBEiJ_P0037875 protein_coding protein_coding MGP_WSBEiJ_T0037876.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24370373 24372088 - MGP_WSBEiJ_P0037876 protein_coding protein_coding MGP_WSBEiJ_T0037877.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24375222 24403583 - MGP_WSBEiJ_P0037877 protein_coding protein_coding MGP_WSBEiJ_T0037878.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24375532 24381650 - MGP_WSBEiJ_P0037878 protein_coding protein_coding MGP_WSBEiJ_T0037879.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24375718 24385498 - MGP_WSBEiJ_P0037879 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037880.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24375827 24392811 - protein_coding processed_transcript MGP_WSBEiJ_T0037881.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24376025 24385818 - protein_coding processed_transcript MGP_WSBEiJ_T0037882.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24381029 24383009 - protein_coding processed_transcript MGP_WSBEiJ_T0037883.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24383492 24407020 - MGP_WSBEiJ_P0037883 protein_coding protein_coding MGP_WSBEiJ_T0037884.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24383692 24385125 - protein_coding processed_transcript MGP_WSBEiJ_T0037885.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24385186 24391688 - MGP_WSBEiJ_P0037885 protein_coding protein_coding MGP_WSBEiJ_T0037886.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24385865 24406894 - MGP_WSBEiJ_P0037886 protein_coding protein_coding MGP_WSBEiJ_T0037887.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24385901 24406894 - MGP_WSBEiJ_P0037887 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037888.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24386555 24387644 - protein_coding processed_transcript MGP_WSBEiJ_T0037889.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24387304 24403504 - MGP_WSBEiJ_P0037889 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037890.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24388530 24391280 - protein_coding retained_intron MGP_WSBEiJ_T0037891.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24401136 24406894 - protein_coding processed_transcript MGP_WSBEiJ_T0037892.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24402057 24406895 - MGP_WSBEiJ_P0037892 protein_coding protein_coding MGP_WSBEiJ_T0037893.1 MGP_WSBEiJ_G0020436.1 mouse_genomes_project 14 24403498 24418541 - protein_coding processed_transcript MGP_WSBEiJ_T0038159.1 MGP_WSBEiJ_G0020528.1 mouse_genomes_project 14 40415543 40426130 + MGP_WSBEiJ_P0038159 Cdkn3 protein_coding protein_coding MGP_WSBEiJ_T0038160.1 MGP_WSBEiJ_G0020528.1 mouse_genomes_project 14 40415642 40426131 + MGP_WSBEiJ_P0038160 Cdkn3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037455.1 MGP_WSBEiJ_G0020326.1 mouse_genomes_project 14 7171648 7261617 + MGP_WSBEiJ_P0037455 Slc4a7 protein_coding protein_coding MGP_WSBEiJ_T0038893.1 MGP_WSBEiJ_G0020750.1 mouse_genomes_project 14 55884219 55886409 + MGP_WSBEiJ_P0038893 Arl11 protein_coding protein_coding MGP_WSBEiJ_T0038722.1 MGP_WSBEiJ_G0020679.1 mouse_genomes_project 14 49970172 49983605 - MGP_WSBEiJ_P0038722 Tgm1 protein_coding protein_coding MGP_WSBEiJ_T0038723.1 MGP_WSBEiJ_G0020679.1 mouse_genomes_project 14 49970172 49983605 - MGP_WSBEiJ_P0038723 Tgm1 protein_coding protein_coding MGP_WSBEiJ_T0038724.1 MGP_WSBEiJ_G0020679.1 mouse_genomes_project 14 49970172 49983201 - MGP_WSBEiJ_P0038724 Tgm1 protein_coding protein_coding MGP_WSBEiJ_T0011167.1 MGP_WSBEiJ_G0009324.1 mouse_genomes_project 14 14040685 14040921 + Gm26372 misc_RNA misc_RNA MGP_WSBEiJ_T0097862.1 MGP_WSBEiJ_G0036525.1 mouse_genomes_project 14 85028100 85028216 + Gm25886 snRNA snRNA MGP_WSBEiJ_T0038954.1 MGP_WSBEiJ_G0020780.1 mouse_genomes_project 14 58705801 58747917 + MGP_WSBEiJ_P0038954 Rp1l1 protein_coding protein_coding MGP_WSBEiJ_T0037709.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19448072 19574965 - MGP_WSBEiJ_P0037709 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037710.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19448077 19510452 - MGP_WSBEiJ_P0037710 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037711.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19448078 19494945 - MGP_WSBEiJ_P0037711 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037712.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19448079 19573774 - MGP_WSBEiJ_P0037712 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037713.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19448304 19573652 - MGP_WSBEiJ_P0037713 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037714.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19448304 19573652 - MGP_WSBEiJ_P0037714 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037715.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19449200 19574929 - MGP_WSBEiJ_P0037715 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037716.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19449634 19494932 - MGP_WSBEiJ_P0037716 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037717.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19457358 19477689 - MGP_WSBEiJ_P0037717 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037718.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19462113 19477520 - Slmap protein_coding processed_transcript MGP_WSBEiJ_T0037719.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19462189 19464966 - Slmap protein_coding retained_intron MGP_WSBEiJ_T0037720.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19462412 19477755 - MGP_WSBEiJ_P0037720 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037721.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19463138 19474086 - Slmap protein_coding retained_intron MGP_WSBEiJ_T0037722.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19472024 19477603 - Slmap protein_coding retained_intron MGP_WSBEiJ_T0037723.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19477488 19498454 - MGP_WSBEiJ_P0037723 Slmap protein_coding protein_coding MGP_WSBEiJ_T0037724.1 MGP_WSBEiJ_G0020396.1 mouse_genomes_project 14 19494559 19498445 - Slmap protein_coding retained_intron MGP_WSBEiJ_T0002493.1 MGP_WSBEiJ_G0002403.1 mouse_genomes_project 14 48398873 48398933 + MGP_WSBEiJ_P0002493 Traj23 TR_J_gene TR_J_gene MGP_WSBEiJ_T0039210.1 MGP_WSBEiJ_G0020872.1 mouse_genomes_project 14 68367781 68380689 + MGP_WSBEiJ_P0039210 Med4 protein_coding protein_coding MGP_WSBEiJ_T0003463.1 MGP_WSBEiJ_G0003152.1 mouse_genomes_project 14 25545068 25547119 - Gm17210 antisense antisense MGP_WSBEiJ_T0097866.1 MGP_WSBEiJ_G0036529.1 mouse_genomes_project 14 94658271 94658378 + Gm26139 snRNA snRNA MGP_WSBEiJ_T0012690.1 MGP_WSBEiJ_G0010820.1 mouse_genomes_project 14 11273102 11276099 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038163.1 MGP_WSBEiJ_G0020530.1 mouse_genomes_project 14 40459775 40477512 - MGP_WSBEiJ_P0038163 Gmfb protein_coding protein_coding MGP_WSBEiJ_T0038164.1 MGP_WSBEiJ_G0020530.1 mouse_genomes_project 14 40459775 40477512 - MGP_WSBEiJ_P0038164 Gmfb protein_coding protein_coding MGP_WSBEiJ_T0038165.1 MGP_WSBEiJ_G0020530.1 mouse_genomes_project 14 40465901 40474988 - MGP_WSBEiJ_P0038165 Gmfb protein_coding protein_coding MGP_WSBEiJ_T0038089.1 MGP_WSBEiJ_G0020500.1 mouse_genomes_project 14 30517045 30526833 + MGP_WSBEiJ_P0038089 Lrit1 protein_coding protein_coding MGP_WSBEiJ_T0000882.1 MGP_WSBEiJ_G0000820.1 mouse_genomes_project 14 49107613 49112360 + TEC TEC MGP_WSBEiJ_T0100568.1 MGP_WSBEiJ_G0039026.1 mouse_genomes_project 14 11409283 11409431 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0038952.1 MGP_WSBEiJ_G0020778.1 mouse_genomes_project 14 58655868 58662922 + MGP_WSBEiJ_P0038952 Sox7 protein_coding protein_coding MGP_WSBEiJ_T0038953.1 MGP_WSBEiJ_G0020779.1 mouse_genomes_project 14 58683269 58701145 - MGP_WSBEiJ_P0038953 4930578I06Rik protein_coding protein_coding MGP_WSBEiJ_T0037528.1 MGP_WSBEiJ_G0020350.1 mouse_genomes_project 14 13137513 13139838 - MGP_WSBEiJ_P0037528 Mrps16 protein_coding protein_coding MGP_WSBEiJ_T0097839.1 MGP_WSBEiJ_G0036502.1 mouse_genomes_project 14 33957918 33958025 + Gm24388 snRNA snRNA MGP_WSBEiJ_T0038041.1 MGP_WSBEiJ_G0020482.1 mouse_genomes_project 14 27481334 27489832 - MGP_WSBEiJ_P0038041 Npy4r protein_coding protein_coding MGP_WSBEiJ_T0009842.1 MGP_WSBEiJ_G0007999.1 mouse_genomes_project 14 58433127 58433206 + Mir598 miRNA miRNA MGP_WSBEiJ_T0038114.1 MGP_WSBEiJ_G0020512.1 mouse_genomes_project 14 34681403 34684098 + MGP_WSBEiJ_P0038114 Sftpa1 protein_coding protein_coding MGP_WSBEiJ_T0038115.1 MGP_WSBEiJ_G0020512.1 mouse_genomes_project 14 34681409 34686074 + MGP_WSBEiJ_P0038115 Sftpa1 protein_coding protein_coding MGP_WSBEiJ_T0038110.1 MGP_WSBEiJ_G0020510.1 mouse_genomes_project 14 34619358 34639747 + MGP_WSBEiJ_P0038110 Dydc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038111.1 MGP_WSBEiJ_G0020510.1 mouse_genomes_project 14 34619358 34639754 + MGP_WSBEiJ_P0038111 Dydc1 protein_coding protein_coding MGP_WSBEiJ_T0038112.1 MGP_WSBEiJ_G0020510.1 mouse_genomes_project 14 34619387 34639750 + MGP_WSBEiJ_P0038112 Dydc1 protein_coding protein_coding MGP_WSBEiJ_T0039077.1 MGP_WSBEiJ_G0020826.1 mouse_genomes_project 14 64075256 64078959 + MGP_WSBEiJ_P0039077 Nkx2-6 protein_coding protein_coding MGP_WSBEiJ_T0000885.1 MGP_WSBEiJ_G0000823.1 mouse_genomes_project 14 56255579 56258491 - TEC TEC MGP_WSBEiJ_T0016780.1 MGP_WSBEiJ_G0014683.1 mouse_genomes_project 14 12215147 12221511 + processed_transcript processed_transcript MGP_WSBEiJ_T0016783.1 MGP_WSBEiJ_G0014683.1 mouse_genomes_project 14 12215254 12222410 + processed_transcript processed_transcript MGP_WSBEiJ_T0097833.1 MGP_WSBEiJ_G0036496.1 mouse_genomes_project 14 14230367 14230459 + Gm25864 snRNA snRNA MGP_WSBEiJ_T0037940.1 MGP_WSBEiJ_G0020450.1 mouse_genomes_project 14 25272984 25309354 + MGP_WSBEiJ_P0037940 Galnt15 protein_coding protein_coding MGP_WSBEiJ_T0037941.1 MGP_WSBEiJ_G0020450.1 mouse_genomes_project 14 25273405 25307384 + MGP_WSBEiJ_P0037941 Galnt15 protein_coding protein_coding MGP_WSBEiJ_T0002465.1 MGP_WSBEiJ_G0002377.1 mouse_genomes_project 14 48368637 48368700 + MGP_WSBEiJ_P0002465 Traj50 TR_J_gene TR_J_gene MGP_WSBEiJ_T0097860.1 MGP_WSBEiJ_G0036523.1 mouse_genomes_project 14 77655481 77655645 - Gm22891 snRNA snRNA MGP_WSBEiJ_T0038422.1 MGP_WSBEiJ_G0020607.1 mouse_genomes_project 14 46421087 46441094 - MGP_WSBEiJ_P0038422 Rab2b protein_coding protein_coding MGP_WSBEiJ_T0038423.1 MGP_WSBEiJ_G0020607.1 mouse_genomes_project 14 46421094 46440847 - MGP_WSBEiJ_P0038423 Rab2b protein_coding protein_coding MGP_WSBEiJ_T0038424.1 MGP_WSBEiJ_G0020607.1 mouse_genomes_project 14 46421097 46428435 - Rab2b protein_coding retained_intron MGP_WSBEiJ_T0038425.1 MGP_WSBEiJ_G0020607.1 mouse_genomes_project 14 46421099 46440888 - MGP_WSBEiJ_P0038425 Rab2b protein_coding protein_coding MGP_WSBEiJ_T0038426.1 MGP_WSBEiJ_G0020607.1 mouse_genomes_project 14 46423041 46440140 - Rab2b protein_coding processed_transcript MGP_WSBEiJ_T0038427.1 MGP_WSBEiJ_G0020607.1 mouse_genomes_project 14 46423041 46440790 - MGP_WSBEiJ_P0038427 Rab2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038428.1 MGP_WSBEiJ_G0020607.1 mouse_genomes_project 14 46423041 46440790 - MGP_WSBEiJ_P0038428 Rab2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038429.1 MGP_WSBEiJ_G0020607.1 mouse_genomes_project 14 46424081 46437018 - MGP_WSBEiJ_P0038429 Rab2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038331.1 MGP_WSBEiJ_G0020591.1 mouse_genomes_project 14 45094952 45096715 - MGP_WSBEiJ_P0038331 Rnase1 protein_coding protein_coding MGP_WSBEiJ_T0038269.1 MGP_WSBEiJ_G0020555.1 mouse_genomes_project 14 43932630 43933654 - MGP_WSBEiJ_P0038269 protein_coding protein_coding MGP_WSBEiJ_T0002497.1 MGP_WSBEiJ_G0002407.1 mouse_genomes_project 14 48403154 48403215 + MGP_WSBEiJ_P0002497 Traj19 TR_J_gene TR_J_gene MGP_WSBEiJ_T0039106.1 MGP_WSBEiJ_G0020840.1 mouse_genomes_project 14 64806461 64809174 + MGP_WSBEiJ_P0039106 Egr3 protein_coding protein_coding MGP_WSBEiJ_T0002568.1 MGP_WSBEiJ_G0002467.1 mouse_genomes_project 14 46916469 46916992 + MGP_WSBEiJ_P0002568 TR_V_gene TR_V_gene MGP_WSBEiJ_T0039535.1 MGP_WSBEiJ_G0020993.1 mouse_genomes_project 14 120899849 121171365 + MGP_WSBEiJ_P0039535 Itgbl1 protein_coding protein_coding MGP_WSBEiJ_T0039536.1 MGP_WSBEiJ_G0020993.1 mouse_genomes_project 14 120900003 121170803 + MGP_WSBEiJ_P0039536 Itgbl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039537.1 MGP_WSBEiJ_G0020993.1 mouse_genomes_project 14 120901302 121171365 + MGP_WSBEiJ_P0039537 Itgbl1 protein_coding protein_coding MGP_WSBEiJ_T0009847.1 MGP_WSBEiJ_G0008004.1 mouse_genomes_project 14 62746343 62746453 - Mir6539 miRNA miRNA MGP_WSBEiJ_T0037462.1 MGP_WSBEiJ_G0020328.1 mouse_genomes_project 14 7878877 7966037 - MGP_WSBEiJ_P0037462 Lrrc3b protein_coding protein_coding MGP_WSBEiJ_T0037463.1 MGP_WSBEiJ_G0020328.1 mouse_genomes_project 14 7878878 7963557 - MGP_WSBEiJ_P0037463 Lrrc3b protein_coding protein_coding MGP_WSBEiJ_T0009855.1 MGP_WSBEiJ_G0008012.1 mouse_genomes_project 14 93004197 93004302 - Gm27441 miRNA miRNA MGP_WSBEiJ_T0037435.1 MGP_WSBEiJ_G0020316.1 mouse_genomes_project 14 5726384 6071975 + MGP_WSBEiJ_P0037435 Synpr protein_coding protein_coding MGP_WSBEiJ_T0037436.1 MGP_WSBEiJ_G0020316.1 mouse_genomes_project 14 5898014 6012886 + MGP_WSBEiJ_P0037436 Synpr protein_coding protein_coding MGP_WSBEiJ_T0037437.1 MGP_WSBEiJ_G0020316.1 mouse_genomes_project 14 5898040 6017641 + Synpr protein_coding retained_intron MGP_WSBEiJ_T0037438.1 MGP_WSBEiJ_G0020316.1 mouse_genomes_project 14 5898113 6071975 + MGP_WSBEiJ_P0037438 Synpr protein_coding protein_coding MGP_WSBEiJ_T0037439.1 MGP_WSBEiJ_G0020316.1 mouse_genomes_project 14 5898127 6067019 + Synpr protein_coding retained_intron MGP_WSBEiJ_T0009840.1 MGP_WSBEiJ_G0007997.1 mouse_genomes_project 14 57476837 57476974 + Mir8098 miRNA miRNA MGP_WSBEiJ_T0039251.1 MGP_WSBEiJ_G0020885.1 mouse_genomes_project 14 70631808 70688091 - MGP_WSBEiJ_P0039251 Cog3 protein_coding protein_coding MGP_WSBEiJ_T0006557.1 MGP_WSBEiJ_G0005427.1 mouse_genomes_project 14 13442086 13459386 - 6230400D17Rik lincRNA lincRNA MGP_WSBEiJ_T0038825.1 MGP_WSBEiJ_G0020729.1 mouse_genomes_project 14 52501337 52546929 + MGP_WSBEiJ_P0038825 Fgf9 protein_coding protein_coding MGP_WSBEiJ_T0038826.1 MGP_WSBEiJ_G0020729.1 mouse_genomes_project 14 52504681 52543583 + MGP_WSBEiJ_P0038826 Fgf9 protein_coding protein_coding MGP_WSBEiJ_T0038827.1 MGP_WSBEiJ_G0020729.1 mouse_genomes_project 14 52507113 52543583 + MGP_WSBEiJ_P0038827 Fgf9 protein_coding protein_coding MGP_WSBEiJ_T0038828.1 MGP_WSBEiJ_G0020729.1 mouse_genomes_project 14 52508504 52542803 + MGP_WSBEiJ_P0038828 Fgf9 protein_coding protein_coding MGP_WSBEiJ_T0038001.1 MGP_WSBEiJ_G0020468.1 mouse_genomes_project 14 26253793 26495991 - MGP_WSBEiJ_P0038001 Wdfy4 protein_coding protein_coding MGP_WSBEiJ_T0038002.1 MGP_WSBEiJ_G0020468.1 mouse_genomes_project 14 26253816 26495991 - MGP_WSBEiJ_P0038002 Wdfy4 protein_coding protein_coding MGP_WSBEiJ_T0038009.1 MGP_WSBEiJ_G0020468.1 mouse_genomes_project 14 26310205 26500981 - MGP_WSBEiJ_P0038009 Wdfy4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038010.1 MGP_WSBEiJ_G0020468.1 mouse_genomes_project 14 26314457 26319473 - MGP_WSBEiJ_P0038010 Wdfy4 protein_coding protein_coding MGP_WSBEiJ_T0038011.1 MGP_WSBEiJ_G0020468.1 mouse_genomes_project 14 26471224 26496433 - MGP_WSBEiJ_P0038011 Wdfy4 protein_coding protein_coding MGP_WSBEiJ_T0039085.1 MGP_WSBEiJ_G0020832.1 mouse_genomes_project 14 64249561 64281851 + MGP_WSBEiJ_P0039085 protein_coding protein_coding MGP_WSBEiJ_T0039086.1 MGP_WSBEiJ_G0020832.1 mouse_genomes_project 14 64249577 64262718 + protein_coding retained_intron MGP_WSBEiJ_T0039087.1 MGP_WSBEiJ_G0020832.1 mouse_genomes_project 14 64249585 64262719 + MGP_WSBEiJ_P0039087 protein_coding protein_coding MGP_WSBEiJ_T0039088.1 MGP_WSBEiJ_G0020832.1 mouse_genomes_project 14 64249603 64259950 + protein_coding processed_transcript MGP_WSBEiJ_T0039090.1 MGP_WSBEiJ_G0020832.1 mouse_genomes_project 14 64275701 64280797 + protein_coding retained_intron MGP_WSBEiJ_T0038333.1 MGP_WSBEiJ_G0020593.1 mouse_genomes_project 14 45248824 45260790 - MGP_WSBEiJ_P0038333 protein_coding protein_coding MGP_WSBEiJ_T0039122.1 MGP_WSBEiJ_G0020845.1 mouse_genomes_project 14 64913281 64943648 - MGP_WSBEiJ_P0039122 Sorbs3 protein_coding protein_coding MGP_WSBEiJ_T0039123.1 MGP_WSBEiJ_G0020845.1 mouse_genomes_project 14 64913983 64942111 - MGP_WSBEiJ_P0039123 Sorbs3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0002609.1 MGP_WSBEiJ_G0002500.1 mouse_genomes_project 14 48349300 48349933 - MGP_WSBEiJ_P0002609 Trdv5 TR_V_gene TR_V_gene MGP_WSBEiJ_T0009869.1 MGP_WSBEiJ_G0008026.1 mouse_genomes_project 14 115643345 115643449 - Mir6391 miRNA miRNA MGP_WSBEiJ_T0097856.1 MGP_WSBEiJ_G0036519.1 mouse_genomes_project 14 65177456 65177558 - Gm24890 snRNA snRNA MGP_WSBEiJ_T0002583.1 MGP_WSBEiJ_G0002481.1 mouse_genomes_project 14 47043120 47043736 + MGP_WSBEiJ_P0002583 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002584.1 MGP_WSBEiJ_G0002481.1 mouse_genomes_project 14 47043164 47043736 + MGP_WSBEiJ_P0002584 TR_V_gene TR_V_gene MGP_WSBEiJ_T0009831.1 MGP_WSBEiJ_G0007988.1 mouse_genomes_project 14 48827908 48828017 - Mir686 miRNA miRNA MGP_WSBEiJ_T0039141.1 MGP_WSBEiJ_G0020850.1 mouse_genomes_project 14 65209700 65221031 + MGP_WSBEiJ_P0039141 Phyhip protein_coding protein_coding MGP_WSBEiJ_T0039142.1 MGP_WSBEiJ_G0020850.1 mouse_genomes_project 14 65210747 65215542 + MGP_WSBEiJ_P0039142 Phyhip protein_coding protein_coding MGP_WSBEiJ_T0038456.1 MGP_WSBEiJ_G0020614.1 mouse_genomes_project 14 46550772 46553847 - MGP_WSBEiJ_P0038456 protein_coding protein_coding MGP_WSBEiJ_T0038330.1 MGP_WSBEiJ_G0020590.1 mouse_genomes_project 14 45080341 45082395 + MGP_WSBEiJ_P0038330 Rnase6 protein_coding protein_coding MGP_WSBEiJ_T0038183.1 MGP_WSBEiJ_G0020535.1 mouse_genomes_project 14 40963996 40984053 + MGP_WSBEiJ_P0038183 Socs4 protein_coding protein_coding MGP_WSBEiJ_T0038036.1 MGP_WSBEiJ_G0020478.1 mouse_genomes_project 14 27371910 27377815 + MGP_WSBEiJ_P0038036 Gm5460 protein_coding protein_coding MGP_WSBEiJ_T0038894.1 MGP_WSBEiJ_G0020751.1 mouse_genomes_project 14 55917815 55937509 - MGP_WSBEiJ_P0038894 Ebpl protein_coding protein_coding MGP_WSBEiJ_T0038037.1 MGP_WSBEiJ_G0020479.1 mouse_genomes_project 14 27381969 27438241 - MGP_WSBEiJ_P0038037 A630023A22Rik protein_coding protein_coding MGP_WSBEiJ_T0002509.1 MGP_WSBEiJ_G0002419.1 mouse_genomes_project 14 48419058 48419121 + MGP_WSBEiJ_P0002509 Traj4 TR_J_gene TR_J_gene MGP_WSBEiJ_T0006597.1 MGP_WSBEiJ_G0005454.1 mouse_genomes_project 14 45434227 45437668 + lincRNA lincRNA MGP_WSBEiJ_T0006598.1 MGP_WSBEiJ_G0005454.1 mouse_genomes_project 14 45434291 45437540 + lincRNA lincRNA MGP_WSBEiJ_T0003499.1 MGP_WSBEiJ_G0003182.1 mouse_genomes_project 14 64196858 64217779 + Gm27175 antisense antisense MGP_WSBEiJ_T0039504.1 MGP_WSBEiJ_G0020987.1 mouse_genomes_project 14 119725602 119730018 + MGP_WSBEiJ_P0039504 Zic2 protein_coding protein_coding MGP_WSBEiJ_T0039505.1 MGP_WSBEiJ_G0020987.1 mouse_genomes_project 14 119728266 119729217 + Zic2 protein_coding retained_intron MGP_WSBEiJ_T0097288.1 MGP_WSBEiJ_G0035965.1 mouse_genomes_project 14 118413020 118418282 + B930095G15Rik sense_intronic sense_intronic MGP_WSBEiJ_T0002481.1 MGP_WSBEiJ_G0002391.1 mouse_genomes_project 14 48384754 48384816 + MGP_WSBEiJ_P0002481 Traj35 TR_J_gene TR_J_gene MGP_WSBEiJ_T0039242.1 MGP_WSBEiJ_G0020880.1 mouse_genomes_project 14 70149805 70194325 + MGP_WSBEiJ_P0039242 Cpb2 protein_coding protein_coding MGP_WSBEiJ_T0038908.1 MGP_WSBEiJ_G0020759.1 mouse_genomes_project 14 57190332 57223594 + Fam124a protein_coding processed_transcript MGP_WSBEiJ_T0038909.1 MGP_WSBEiJ_G0020759.1 mouse_genomes_project 14 57190332 57242890 + Fam124a protein_coding processed_transcript MGP_WSBEiJ_T0038910.1 MGP_WSBEiJ_G0020759.1 mouse_genomes_project 14 57190332 57245346 + MGP_WSBEiJ_P0038910 Fam124a protein_coding protein_coding MGP_WSBEiJ_T0038911.1 MGP_WSBEiJ_G0020759.1 mouse_genomes_project 14 57190370 57199611 + Fam124a protein_coding processed_transcript MGP_WSBEiJ_T0037527.1 MGP_WSBEiJ_G0020349.1 mouse_genomes_project 14 13130920 13135193 - MGP_WSBEiJ_P0037527 Dnajc9 protein_coding protein_coding MGP_WSBEiJ_T0038996.1 MGP_WSBEiJ_G0020799.1 mouse_genomes_project 14 60688584 60723539 - MGP_WSBEiJ_P0038996 Scara3 protein_coding protein_coding MGP_WSBEiJ_T0038881.1 MGP_WSBEiJ_G0020746.1 mouse_genomes_project 14 55331211 55445619 + MGP_WSBEiJ_P0038881 Mipep protein_coding protein_coding MGP_WSBEiJ_T0097166.1 MGP_WSBEiJ_G0035847.1 mouse_genomes_project 14 44739057 44739355 - Rpph1 ribozyme ribozyme MGP_WSBEiJ_T0039433.1 MGP_WSBEiJ_G0020951.1 mouse_genomes_project 14 102420591 102420996 - MGP_WSBEiJ_P0039433 Gm4775 protein_coding protein_coding MGP_WSBEiJ_T0002501.1 MGP_WSBEiJ_G0002411.1 mouse_genomes_project 14 48407199 48407259 + MGP_WSBEiJ_P0002501 Traj15 TR_J_gene TR_J_gene MGP_WSBEiJ_T0039208.1 MGP_WSBEiJ_G0020870.1 mouse_genomes_project 14 68196585 68220313 - MGP_WSBEiJ_P0039208 Itm2b protein_coding protein_coding MGP_WSBEiJ_T0038012.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26526928 26529909 + Arhgap22 protein_coding processed_transcript MGP_WSBEiJ_T0038013.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26529725 26683966 + MGP_WSBEiJ_P0038013 Arhgap22 protein_coding protein_coding MGP_WSBEiJ_T0038014.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26560607 26584234 + Arhgap22 protein_coding processed_transcript MGP_WSBEiJ_T0038015.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26560921 26683610 + MGP_WSBEiJ_P0038015 Arhgap22 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038016.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26619579 26683964 + Arhgap22 protein_coding processed_transcript MGP_WSBEiJ_T0038017.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26633800 26683966 + MGP_WSBEiJ_P0038017 Arhgap22 protein_coding protein_coding MGP_WSBEiJ_T0038018.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26665397 26676627 + Arhgap22 protein_coding processed_transcript MGP_WSBEiJ_T0038019.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26676348 26678522 + Arhgap22 protein_coding processed_transcript MGP_WSBEiJ_T0038020.1 MGP_WSBEiJ_G0020470.1 mouse_genomes_project 14 26676427 26677380 + Arhgap22 protein_coding processed_transcript MGP_WSBEiJ_T0038890.1 MGP_WSBEiJ_G0020749.1 mouse_genomes_project 14 55791112 55829849 - MGP_WSBEiJ_P0038890 Sgcg protein_coding protein_coding MGP_WSBEiJ_T0038891.1 MGP_WSBEiJ_G0020749.1 mouse_genomes_project 14 55791497 55829783 - MGP_WSBEiJ_P0038891 Sgcg protein_coding protein_coding MGP_WSBEiJ_T0038892.1 MGP_WSBEiJ_G0020749.1 mouse_genomes_project 14 55792869 55802504 - MGP_WSBEiJ_P0038892 Sgcg protein_coding protein_coding MGP_WSBEiJ_T0003446.1 MGP_WSBEiJ_G0003142.1 mouse_genomes_project 14 13298958 13317888 + 1810062O18Rik antisense antisense MGP_WSBEiJ_T0003447.1 MGP_WSBEiJ_G0003142.1 mouse_genomes_project 14 13298993 13323365 + 1810062O18Rik antisense antisense MGP_WSBEiJ_T0003448.1 MGP_WSBEiJ_G0003142.1 mouse_genomes_project 14 13299136 13317856 + 1810062O18Rik antisense antisense MGP_WSBEiJ_T0003449.1 MGP_WSBEiJ_G0003142.1 mouse_genomes_project 14 13299172 13323502 + 1810062O18Rik antisense antisense MGP_WSBEiJ_T0003450.1 MGP_WSBEiJ_G0003142.1 mouse_genomes_project 14 13317893 13323509 + 1810062O18Rik antisense antisense MGP_WSBEiJ_T0039336.1 MGP_WSBEiJ_G0020921.1 mouse_genomes_project 14 84019710 84026334 - MGP_WSBEiJ_P0039336 Pcdh20 protein_coding protein_coding MGP_WSBEiJ_T0039337.1 MGP_WSBEiJ_G0020921.1 mouse_genomes_project 14 84021825 84026284 - MGP_WSBEiJ_P0039337 Pcdh20 protein_coding protein_coding MGP_WSBEiJ_T0009838.1 MGP_WSBEiJ_G0007995.1 mouse_genomes_project 14 56218697 56218790 - Mir16-1 miRNA miRNA MGP_WSBEiJ_T0037390.1 MGP_WSBEiJ_G0020302.1 mouse_genomes_project 14 393333 406070 + MGP_WSBEiJ_P0037390 protein_coding protein_coding MGP_WSBEiJ_T0037391.1 MGP_WSBEiJ_G0020302.1 mouse_genomes_project 14 404313 404790 + MGP_WSBEiJ_P0037391 protein_coding protein_coding MGP_WSBEiJ_T0009856.1 MGP_WSBEiJ_G0008013.1 mouse_genomes_project 14 96852741 96852860 + Gm22401 miRNA miRNA MGP_WSBEiJ_T0000896.1 MGP_WSBEiJ_G0000834.1 mouse_genomes_project 14 84977647 84978082 + TEC TEC MGP_WSBEiJ_T0038718.1 MGP_WSBEiJ_G0020676.1 mouse_genomes_project 14 49932056 49941685 - MGP_WSBEiJ_P0038718 Nedd8 protein_coding protein_coding MGP_WSBEiJ_T0038719.1 MGP_WSBEiJ_G0020676.1 mouse_genomes_project 14 49932058 49941718 - MGP_WSBEiJ_P0038719 Nedd8 protein_coding protein_coding MGP_WSBEiJ_T0037761.1 MGP_WSBEiJ_G0020411.1 mouse_genomes_project 14 22026006 22340323 - MGP_WSBEiJ_P0037761 Cacna2d3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037762.1 MGP_WSBEiJ_G0020411.1 mouse_genomes_project 14 22026006 22311296 - MGP_WSBEiJ_P0037762 Cacna2d3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037763.1 MGP_WSBEiJ_G0020411.1 mouse_genomes_project 14 22026011 22860770 - MGP_WSBEiJ_P0037763 Cacna2d3 protein_coding protein_coding MGP_WSBEiJ_T0039104.1 MGP_WSBEiJ_G0020838.1 mouse_genomes_project 14 64490028 64513241 - MGP_WSBEiJ_P0039104 Rhobtb2 protein_coding protein_coding MGP_WSBEiJ_T0037554.1 MGP_WSBEiJ_G0020356.1 mouse_genomes_project 14 13403343 13410791 - MGP_WSBEiJ_P0037554 Myoz1 protein_coding protein_coding MGP_WSBEiJ_T0099107.1 MGP_WSBEiJ_G0037770.1 mouse_genomes_project 14 70785448 70785578 + Snora31 snoRNA snoRNA MGP_WSBEiJ_T0000899.1 MGP_WSBEiJ_G0000837.1 mouse_genomes_project 14 100241030 100242788 + TEC TEC MGP_WSBEiJ_T0038493.1 MGP_WSBEiJ_G0020623.1 mouse_genomes_project 14 48632794 48633650 + Mrpl52 protein_coding retained_intron MGP_WSBEiJ_T0038494.1 MGP_WSBEiJ_G0020623.1 mouse_genomes_project 14 48632795 48633310 + Mrpl52 protein_coding retained_intron MGP_WSBEiJ_T0038495.1 MGP_WSBEiJ_G0020623.1 mouse_genomes_project 14 48632805 48635592 + MGP_WSBEiJ_P0038495 Mrpl52 protein_coding protein_coding MGP_WSBEiJ_T0038496.1 MGP_WSBEiJ_G0020623.1 mouse_genomes_project 14 48632912 48635610 + Mrpl52 protein_coding retained_intron MGP_WSBEiJ_T0038497.1 MGP_WSBEiJ_G0020623.1 mouse_genomes_project 14 48632923 48635613 + MGP_WSBEiJ_P0038497 Mrpl52 protein_coding protein_coding MGP_WSBEiJ_T0038068.1 MGP_WSBEiJ_G0020494.1 mouse_genomes_project 14 28039191 28120236 + MGP_WSBEiJ_P0038068 Wapl protein_coding protein_coding MGP_WSBEiJ_T0038069.1 MGP_WSBEiJ_G0020494.1 mouse_genomes_project 14 28039227 28118109 + MGP_WSBEiJ_P0038069 Wapl protein_coding protein_coding MGP_WSBEiJ_T0038070.1 MGP_WSBEiJ_G0020494.1 mouse_genomes_project 14 28039385 28118204 + MGP_WSBEiJ_P0038070 Wapl protein_coding protein_coding MGP_WSBEiJ_T0038071.1 MGP_WSBEiJ_G0020494.1 mouse_genomes_project 14 28070872 28118469 + Wapl protein_coding processed_transcript MGP_WSBEiJ_T0038072.1 MGP_WSBEiJ_G0020494.1 mouse_genomes_project 14 28096026 28118471 + MGP_WSBEiJ_P0038072 Wapl protein_coding protein_coding MGP_WSBEiJ_T0038073.1 MGP_WSBEiJ_G0020494.1 mouse_genomes_project 14 28109112 28113392 + MGP_WSBEiJ_P0038073 Wapl protein_coding protein_coding MGP_WSBEiJ_T0039518.1 MGP_WSBEiJ_G0020990.1 mouse_genomes_project 14 120077833 120176879 - MGP_WSBEiJ_P0039518 Ggact protein_coding protein_coding MGP_WSBEiJ_T0039521.1 MGP_WSBEiJ_G0020990.1 mouse_genomes_project 14 120153994 120176921 - MGP_WSBEiJ_P0039521 Ggact protein_coding protein_coding MGP_WSBEiJ_T0039522.1 MGP_WSBEiJ_G0020990.1 mouse_genomes_project 14 120154005 120154834 - MGP_WSBEiJ_P0039522 Ggact protein_coding protein_coding MGP_WSBEiJ_T0039523.1 MGP_WSBEiJ_G0020990.1 mouse_genomes_project 14 120154563 120177516 - MGP_WSBEiJ_P0039523 Ggact protein_coding protein_coding MGP_WSBEiJ_T0039524.1 MGP_WSBEiJ_G0020990.1 mouse_genomes_project 14 120154612 120176844 - MGP_WSBEiJ_P0039524 Ggact protein_coding protein_coding MGP_WSBEiJ_T0016824.1 MGP_WSBEiJ_G0014699.1 mouse_genomes_project 14 96351885 96386810 + 4930517O19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016825.1 MGP_WSBEiJ_G0014699.1 mouse_genomes_project 14 96351932 96387751 + 4930517O19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016826.1 MGP_WSBEiJ_G0014699.1 mouse_genomes_project 14 96351932 96386286 + 4930517O19Rik processed_transcript processed_transcript MGP_WSBEiJ_T0099096.1 MGP_WSBEiJ_G0037759.1 mouse_genomes_project 14 51213999 51214085 - Gm22498 snoRNA snoRNA MGP_WSBEiJ_T0037860.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24336106 24337960 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037861.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24336106 24339922 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037862.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24336106 24336942 - MGP_WSBEiJ_P0037862 Stab1 protein_coding protein_coding MGP_WSBEiJ_T0037863.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24336106 24367001 - MGP_WSBEiJ_P0037863 Stab1 protein_coding protein_coding MGP_WSBEiJ_T0037864.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24336110 24342543 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037865.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24336110 24337268 - Stab1 protein_coding processed_transcript MGP_WSBEiJ_T0037866.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24336112 24340815 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037867.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24337062 24338037 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037868.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24338726 24340282 - MGP_WSBEiJ_P0037868 Stab1 protein_coding protein_coding MGP_WSBEiJ_T0037869.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24339473 24340087 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037870.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24354549 24355297 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037871.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24354549 24359742 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037872.1 MGP_WSBEiJ_G0020435.1 mouse_genomes_project 14 24356422 24366955 - Stab1 protein_coding retained_intron MGP_WSBEiJ_T0037700.1 MGP_WSBEiJ_G0020394.1 mouse_genomes_project 14 18894451 18904502 + MGP_WSBEiJ_P0037700 Duxbl2 protein_coding protein_coding MGP_WSBEiJ_T0037701.1 MGP_WSBEiJ_G0020394.1 mouse_genomes_project 14 18894769 18904693 + MGP_WSBEiJ_P0037701 Duxbl2 protein_coding protein_coding MGP_WSBEiJ_T0037703.1 MGP_WSBEiJ_G0020394.1 mouse_genomes_project 14 18895407 18902562 + MGP_WSBEiJ_P0037703 Duxbl2 protein_coding protein_coding MGP_WSBEiJ_T0037705.1 MGP_WSBEiJ_G0020394.1 mouse_genomes_project 14 18895741 18903300 + Duxbl2 protein_coding processed_transcript MGP_WSBEiJ_T0037707.1 MGP_WSBEiJ_G0020394.1 mouse_genomes_project 14 18898773 18905872 + MGP_WSBEiJ_P0037707 Duxbl2 protein_coding protein_coding MGP_WSBEiJ_T0009848.1 MGP_WSBEiJ_G0008005.1 mouse_genomes_project 14 64391265 64391338 + Mir6950 miRNA miRNA MGP_WSBEiJ_T0038055.1 MGP_WSBEiJ_G0020489.1 mouse_genomes_project 14 27730352 27755836 + MGP_WSBEiJ_P0038055 Mmrn2 protein_coding protein_coding MGP_WSBEiJ_T0038054.1 MGP_WSBEiJ_G0020488.1 mouse_genomes_project 14 27725131 27729640 - MGP_WSBEiJ_P0038054 Sncg protein_coding protein_coding MGP_WSBEiJ_T0038185.1 MGP_WSBEiJ_G0020537.1 mouse_genomes_project 14 41064786 41076791 + MGP_WSBEiJ_P0038185 Lgals3 protein_coding protein_coding MGP_WSBEiJ_T0038186.1 MGP_WSBEiJ_G0020537.1 mouse_genomes_project 14 41070570 41082510 + MGP_WSBEiJ_P0038186 Lgals3 protein_coding protein_coding MGP_WSBEiJ_T0038187.1 MGP_WSBEiJ_G0020537.1 mouse_genomes_project 14 41070656 41082146 + MGP_WSBEiJ_P0038187 Lgals3 protein_coding protein_coding MGP_WSBEiJ_T0038188.1 MGP_WSBEiJ_G0020537.1 mouse_genomes_project 14 41070673 41076690 + MGP_WSBEiJ_P0038188 Lgals3 protein_coding protein_coding MGP_WSBEiJ_T0038189.1 MGP_WSBEiJ_G0020537.1 mouse_genomes_project 14 41070731 41082141 + MGP_WSBEiJ_P0038189 Lgals3 protein_coding protein_coding MGP_WSBEiJ_T0099098.1 MGP_WSBEiJ_G0037761.1 mouse_genomes_project 14 53098638 53098771 - Gm25614 snoRNA snoRNA MGP_WSBEiJ_T0097859.1 MGP_WSBEiJ_G0036522.1 mouse_genomes_project 14 75190451 75190558 - Gm25935 snRNA snRNA MGP_WSBEiJ_T0016775.1 MGP_WSBEiJ_G0014682.1 mouse_genomes_project 14 46005 74529 + Gm16741 processed_transcript processed_transcript MGP_WSBEiJ_T0037443.1 MGP_WSBEiJ_G0020320.1 mouse_genomes_project 14 6476316 6572724 + MGP_WSBEiJ_P0037443 Atxn7 protein_coding protein_coding MGP_WSBEiJ_T0003517.1 MGP_WSBEiJ_G0003193.1 mouse_genomes_project 14 121174956 121176366 + Gm28932 antisense antisense MGP_WSBEiJ_T0039108.1 MGP_WSBEiJ_G0020842.1 mouse_genomes_project 14 64870387 64886896 - MGP_WSBEiJ_P0039108 Ccar2 protein_coding protein_coding MGP_WSBEiJ_T0009867.1 MGP_WSBEiJ_G0008024.1 mouse_genomes_project 14 114976210 114976315 - Mir6239 miRNA miRNA MGP_WSBEiJ_T0037977.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25447936 25490470 + Parg protein_coding retained_intron MGP_WSBEiJ_T0037978.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25447936 25547794 + MGP_WSBEiJ_P0037978 Parg protein_coding protein_coding MGP_WSBEiJ_T0037979.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25447936 25550859 + MGP_WSBEiJ_P0037979 Parg protein_coding protein_coding MGP_WSBEiJ_T0037980.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25447936 25551189 + MGP_WSBEiJ_P0037980 Parg protein_coding protein_coding MGP_WSBEiJ_T0037981.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25447958 25456569 + MGP_WSBEiJ_P0037981 Parg protein_coding protein_coding MGP_WSBEiJ_T0037982.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25448020 25550859 + MGP_WSBEiJ_P0037982 Parg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037983.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25448424 25456520 + Parg protein_coding processed_transcript MGP_WSBEiJ_T0037984.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25461782 25489635 + MGP_WSBEiJ_P0037984 Parg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037985.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25489542 25513265 + Parg protein_coding processed_transcript MGP_WSBEiJ_T0037986.1 MGP_WSBEiJ_G0020457.1 mouse_genomes_project 14 25526205 25549983 + Parg protein_coding processed_transcript MGP_WSBEiJ_T0038939.1 MGP_WSBEiJ_G0020774.1 mouse_genomes_project 14 58191521 58210383 - MGP_WSBEiJ_P0038939 Tdh protein_coding protein_coding MGP_WSBEiJ_T0038940.1 MGP_WSBEiJ_G0020774.1 mouse_genomes_project 14 58193952 58201560 - MGP_WSBEiJ_P0038940 Tdh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038941.1 MGP_WSBEiJ_G0020774.1 mouse_genomes_project 14 58194007 58201560 - MGP_WSBEiJ_P0038941 Tdh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038942.1 MGP_WSBEiJ_G0020774.1 mouse_genomes_project 14 58194007 58201560 - MGP_WSBEiJ_P0038942 Tdh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038943.1 MGP_WSBEiJ_G0020774.1 mouse_genomes_project 14 58196919 58198440 - Tdh protein_coding retained_intron MGP_WSBEiJ_T0038944.1 MGP_WSBEiJ_G0020774.1 mouse_genomes_project 14 58205156 58210047 - Tdh protein_coding processed_transcript MGP_WSBEiJ_T0003479.1 MGP_WSBEiJ_G0003166.1 mouse_genomes_project 14 49213714 49214045 + Gm29015 antisense antisense MGP_WSBEiJ_T0038385.1 MGP_WSBEiJ_G0020601.1 mouse_genomes_project 14 46157350 46160302 + MGP_WSBEiJ_P0038385 Tmem253 protein_coding protein_coding MGP_WSBEiJ_T0039495.1 MGP_WSBEiJ_G0020981.1 mouse_genomes_project 14 119167141 119180026 - MGP_WSBEiJ_P0039495 Gpr183 protein_coding protein_coding MGP_WSBEiJ_T0099108.1 MGP_WSBEiJ_G0037771.1 mouse_genomes_project 14 70918049 70918183 - Gm25517 snoRNA snoRNA MGP_WSBEiJ_T0002663.1 MGP_WSBEiJ_G0002547.1 mouse_genomes_project 14 48070462 48071014 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0003467.1 MGP_WSBEiJ_G0003156.1 mouse_genomes_project 14 32397075 32461269 + Nrg3os antisense antisense MGP_WSBEiJ_T0039006.1 MGP_WSBEiJ_G0020801.1 mouse_genomes_project 14 60758613 60785513 - MGP_WSBEiJ_P0039006 Gulo protein_coding protein_coding MGP_WSBEiJ_T0002560.1 MGP_WSBEiJ_G0002462.1 mouse_genomes_project 14 46860606 46862235 + MGP_WSBEiJ_P0002560 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002561.1 MGP_WSBEiJ_G0002462.1 mouse_genomes_project 14 46861928 46862235 + MGP_WSBEiJ_P0002561 TR_V_gene TR_V_gene MGP_WSBEiJ_T0009825.1 MGP_WSBEiJ_G0007982.1 mouse_genomes_project 14 23737715 23737775 + Mir3076 miRNA miRNA MGP_WSBEiJ_T0039299.1 MGP_WSBEiJ_G0020904.1 mouse_genomes_project 14 73927856 74287602 + MGP_WSBEiJ_P0039299 Vwa8 protein_coding protein_coding MGP_WSBEiJ_T0012697.1 MGP_WSBEiJ_G0010827.1 mouse_genomes_project 14 18851842 18853031 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009830.1 MGP_WSBEiJ_G0007987.1 mouse_genomes_project 14 43396624 43396729 - Gm22949 miRNA miRNA MGP_WSBEiJ_T0016829.1 MGP_WSBEiJ_G0014701.1 mouse_genomes_project 14 101809436 101816239 + 4930449E01Rik processed_transcript lincRNA MGP_WSBEiJ_T0016830.1 MGP_WSBEiJ_G0014701.1 mouse_genomes_project 14 101811550 101811910 + 4930449E01Rik processed_transcript TEC MGP_WSBEiJ_T0016831.1 MGP_WSBEiJ_G0014701.1 mouse_genomes_project 14 101814192 101816246 + 4930449E01Rik processed_transcript lincRNA MGP_WSBEiJ_T0002445.1 MGP_WSBEiJ_G0002361.1 mouse_genomes_project 14 48343198 48349507 + MGP_WSBEiJ_P0002445 Trdc TR_C_gene TR_C_gene MGP_WSBEiJ_T0037963.1 MGP_WSBEiJ_G0020454.1 mouse_genomes_project 14 25405940 25425981 + MGP_WSBEiJ_P0037963 protein_coding protein_coding MGP_WSBEiJ_T0037965.1 MGP_WSBEiJ_G0020454.1 mouse_genomes_project 14 25406013 25422371 + MGP_WSBEiJ_P0037965 protein_coding protein_coding MGP_WSBEiJ_T0037966.1 MGP_WSBEiJ_G0020454.1 mouse_genomes_project 14 25406056 25422256 + MGP_WSBEiJ_P0037966 protein_coding protein_coding MGP_WSBEiJ_T0037967.1 MGP_WSBEiJ_G0020454.1 mouse_genomes_project 14 25411666 25425981 + MGP_WSBEiJ_P0037967 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037968.1 MGP_WSBEiJ_G0020454.1 mouse_genomes_project 14 25411868 25425373 + MGP_WSBEiJ_P0037968 protein_coding protein_coding MGP_WSBEiJ_T0037969.1 MGP_WSBEiJ_G0020454.1 mouse_genomes_project 14 25411869 25418529 + MGP_WSBEiJ_P0037969 protein_coding protein_coding MGP_WSBEiJ_T0037970.1 MGP_WSBEiJ_G0020454.1 mouse_genomes_project 14 25411869 25418825 + MGP_WSBEiJ_P0037970 protein_coding protein_coding MGP_WSBEiJ_T0037971.1 MGP_WSBEiJ_G0020454.1 mouse_genomes_project 14 25412237 25418752 + MGP_WSBEiJ_P0037971 protein_coding protein_coding MGP_WSBEiJ_T0003460.1 MGP_WSBEiJ_G0003149.1 mouse_genomes_project 14 19671752 19682847 - Arf4os antisense antisense MGP_WSBEiJ_T0099094.1 MGP_WSBEiJ_G0037757.1 mouse_genomes_project 14 49413343 49413468 - Gm23596 snoRNA snoRNA MGP_WSBEiJ_T0099124.1 MGP_WSBEiJ_G0037787.1 mouse_genomes_project 14 98549833 98549964 - Gm22347 snoRNA snoRNA MGP_WSBEiJ_T0016837.1 MGP_WSBEiJ_G0014705.1 mouse_genomes_project 14 116176017 116192880 + Gm16835 processed_transcript processed_transcript MGP_WSBEiJ_T0006593.1 MGP_WSBEiJ_G0005452.1 mouse_genomes_project 14 44803171 44810114 + lincRNA lincRNA MGP_WSBEiJ_T0006594.1 MGP_WSBEiJ_G0005452.1 mouse_genomes_project 14 44803183 44816996 + lincRNA lincRNA MGP_WSBEiJ_T0037749.1 MGP_WSBEiJ_G0020405.1 mouse_genomes_project 14 20098152 20169459 + MGP_WSBEiJ_P0037749 Il17rd protein_coding protein_coding MGP_WSBEiJ_T0039050.1 MGP_WSBEiJ_G0020815.1 mouse_genomes_project 14 62086497 62294469 + MGP_WSBEiJ_P0039050 Ebf2 protein_coding protein_coding MGP_WSBEiJ_T0039051.1 MGP_WSBEiJ_G0020815.1 mouse_genomes_project 14 62086791 62295621 + MGP_WSBEiJ_P0039051 Ebf2 protein_coding protein_coding MGP_WSBEiJ_T0039052.1 MGP_WSBEiJ_G0020815.1 mouse_genomes_project 14 62086808 62089719 + Ebf2 protein_coding retained_intron MGP_WSBEiJ_T0039053.1 MGP_WSBEiJ_G0020815.1 mouse_genomes_project 14 62087849 62293380 + MGP_WSBEiJ_P0039053 Ebf2 protein_coding protein_coding MGP_WSBEiJ_T0099077.1 MGP_WSBEiJ_G0037740.1 mouse_genomes_project 14 4737094 4737223 - Gm24578 snoRNA snoRNA MGP_WSBEiJ_T0038983.1 MGP_WSBEiJ_G0020793.1 mouse_genomes_project 14 60274176 60341392 - MGP_WSBEiJ_P0038983 Elp3 protein_coding protein_coding MGP_WSBEiJ_T0096957.1 MGP_WSBEiJ_G0035638.1 mouse_genomes_project 14 57517165 57517284 + n-R5s47 rRNA rRNA MGP_WSBEiJ_T0000890.1 MGP_WSBEiJ_G0000828.1 mouse_genomes_project 14 64116518 64120070 - TEC TEC MGP_WSBEiJ_T0038788.1 MGP_WSBEiJ_G0020718.1 mouse_genomes_project 14 51675543 51803823 - MGP_WSBEiJ_P0038788 Cryl1 protein_coding protein_coding MGP_WSBEiJ_T0038833.1 MGP_WSBEiJ_G0020731.1 mouse_genomes_project 14 53629037 53648924 - MGP_WSBEiJ_P0038833 Gm5142 protein_coding protein_coding MGP_WSBEiJ_T0009857.1 MGP_WSBEiJ_G0008014.1 mouse_genomes_project 14 99235964 99236048 - Mir5130 miRNA miRNA MGP_WSBEiJ_T0002608.1 MGP_WSBEiJ_G0002499.1 mouse_genomes_project 14 48280363 48280974 + MGP_WSBEiJ_P0002608 Trdv4 TR_V_gene TR_V_gene MGP_WSBEiJ_T0037483.1 MGP_WSBEiJ_G0020335.1 mouse_genomes_project 14 10813388 10831668 + MGP_WSBEiJ_P0037483 Nkiras1 protein_coding protein_coding MGP_WSBEiJ_T0037484.1 MGP_WSBEiJ_G0020335.1 mouse_genomes_project 14 10813438 10827768 + MGP_WSBEiJ_P0037484 Nkiras1 protein_coding protein_coding MGP_WSBEiJ_T0037485.1 MGP_WSBEiJ_G0020335.1 mouse_genomes_project 14 10813456 10825048 + Nkiras1 protein_coding retained_intron MGP_WSBEiJ_T0037486.1 MGP_WSBEiJ_G0020335.1 mouse_genomes_project 14 10813463 10826130 + Nkiras1 protein_coding processed_transcript MGP_WSBEiJ_T0037487.1 MGP_WSBEiJ_G0020335.1 mouse_genomes_project 14 10813479 10828163 + MGP_WSBEiJ_P0037487 Nkiras1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037488.1 MGP_WSBEiJ_G0020335.1 mouse_genomes_project 14 10813490 10824803 + Nkiras1 protein_coding retained_intron MGP_WSBEiJ_T0037489.1 MGP_WSBEiJ_G0020335.1 mouse_genomes_project 14 10813516 10826271 + Nkiras1 protein_coding processed_transcript MGP_WSBEiJ_T0038647.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843058 49846285 + MGP_WSBEiJ_P0038647 Psme1 protein_coding protein_coding MGP_WSBEiJ_T0038648.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843295 49846467 + MGP_WSBEiJ_P0038648 Psme1 protein_coding protein_coding MGP_WSBEiJ_T0038649.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843340 49845581 + Psme1 protein_coding retained_intron MGP_WSBEiJ_T0038650.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843391 49846467 + Psme1 protein_coding retained_intron MGP_WSBEiJ_T0038651.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843403 49846313 + Psme1 protein_coding retained_intron MGP_WSBEiJ_T0038652.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843421 49845342 + Psme1 protein_coding retained_intron MGP_WSBEiJ_T0038653.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843473 49845881 + MGP_WSBEiJ_P0038653 Psme1 protein_coding protein_coding MGP_WSBEiJ_T0038654.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843510 49846320 + MGP_WSBEiJ_P0038654 Psme1 protein_coding protein_coding MGP_WSBEiJ_T0038655.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49843510 49846320 + MGP_WSBEiJ_P0038655 Psme1 protein_coding protein_coding MGP_WSBEiJ_T0038656.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49844902 49846390 + Psme1 protein_coding retained_intron MGP_WSBEiJ_T0038657.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49844972 49845886 + Psme1 protein_coding retained_intron MGP_WSBEiJ_T0038658.1 MGP_WSBEiJ_G0020666.1 mouse_genomes_project 14 49845686 49846468 + MGP_WSBEiJ_P0038658 Psme1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039502.1 MGP_WSBEiJ_G0020986.1 mouse_genomes_project 14 119700854 119709714 - MGP_WSBEiJ_P0039502 Zic5 protein_coding protein_coding MGP_WSBEiJ_T0039503.1 MGP_WSBEiJ_G0020986.1 mouse_genomes_project 14 119703241 119704070 - Zic5 protein_coding processed_transcript MGP_WSBEiJ_T0037859.1 MGP_WSBEiJ_G0020434.1 mouse_genomes_project 14 24328376 24336172 + MGP_WSBEiJ_P0037859 Nt5dc2 protein_coding protein_coding MGP_WSBEiJ_T0006565.1 MGP_WSBEiJ_G0005433.1 mouse_genomes_project 14 18249831 18272673 - Gm26660 lincRNA lincRNA MGP_WSBEiJ_T0037508.1 MGP_WSBEiJ_G0020338.1 mouse_genomes_project 14 12101639 12102868 - MGP_WSBEiJ_P0037508 protein_coding protein_coding MGP_WSBEiJ_T0012751.1 MGP_WSBEiJ_G0010881.1 mouse_genomes_project 14 112501020 112501632 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038918.1 MGP_WSBEiJ_G0020765.1 mouse_genomes_project 14 57671362 57677436 + MGP_WSBEiJ_P0038918 Defb43 protein_coding protein_coding MGP_WSBEiJ_T0038485.1 MGP_WSBEiJ_G0020622.1 mouse_genomes_project 14 48570339 48613305 - MGP_WSBEiJ_P0038485 Slc7a7 protein_coding protein_coding MGP_WSBEiJ_T0038486.1 MGP_WSBEiJ_G0020622.1 mouse_genomes_project 14 48570341 48621351 - MGP_WSBEiJ_P0038486 Slc7a7 protein_coding protein_coding MGP_WSBEiJ_T0038487.1 MGP_WSBEiJ_G0020622.1 mouse_genomes_project 14 48570342 48614040 - MGP_WSBEiJ_P0038487 Slc7a7 protein_coding protein_coding MGP_WSBEiJ_T0038488.1 MGP_WSBEiJ_G0020622.1 mouse_genomes_project 14 48574259 48584663 - Slc7a7 protein_coding processed_transcript MGP_WSBEiJ_T0038489.1 MGP_WSBEiJ_G0020622.1 mouse_genomes_project 14 48574708 48600961 - Slc7a7 protein_coding processed_transcript MGP_WSBEiJ_T0038490.1 MGP_WSBEiJ_G0020622.1 mouse_genomes_project 14 48579493 48614424 - MGP_WSBEiJ_P0038490 Slc7a7 protein_coding protein_coding MGP_WSBEiJ_T0038491.1 MGP_WSBEiJ_G0020622.1 mouse_genomes_project 14 48612663 48615992 - MGP_WSBEiJ_P0038491 Slc7a7 protein_coding protein_coding MGP_WSBEiJ_T0038492.1 MGP_WSBEiJ_G0020622.1 mouse_genomes_project 14 48612800 48621432 - MGP_WSBEiJ_P0038492 Slc7a7 protein_coding protein_coding MGP_WSBEiJ_T0099120.1 MGP_WSBEiJ_G0037783.1 mouse_genomes_project 14 94261706 94261787 - Gm26006 snoRNA snoRNA MGP_WSBEiJ_T0038329.1 MGP_WSBEiJ_G0020589.1 mouse_genomes_project 14 45062714 45065930 + MGP_WSBEiJ_P0038329 Eddm3b protein_coding protein_coding MGP_WSBEiJ_T0039263.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71396621 71493339 + MGP_WSBEiJ_P0039263 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039264.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71397239 71493339 + MGP_WSBEiJ_P0039264 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039265.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71397766 71398296 + Tsc22d1 protein_coding processed_transcript MGP_WSBEiJ_T0039266.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71400000 71424460 + MGP_WSBEiJ_P0039266 Tsc22d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039267.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71400294 71421832 + MGP_WSBEiJ_P0039267 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039268.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71400297 71423173 + MGP_WSBEiJ_P0039268 Tsc22d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039269.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71400474 71423244 + MGP_WSBEiJ_P0039269 Tsc22d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039270.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71420598 71423215 + Tsc22d1 protein_coding processed_transcript MGP_WSBEiJ_T0039271.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71421765 71423215 + Tsc22d1 protein_coding retained_intron MGP_WSBEiJ_T0039272.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71460350 71492507 + MGP_WSBEiJ_P0039272 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039273.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71471933 71492575 + MGP_WSBEiJ_P0039273 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039274.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71472610 71492747 + MGP_WSBEiJ_P0039274 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039275.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71489790 71493340 + MGP_WSBEiJ_P0039275 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039276.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71490054 71493342 + MGP_WSBEiJ_P0039276 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039277.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71490106 71491314 + MGP_WSBEiJ_P0039277 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0039278.1 MGP_WSBEiJ_G0020892.1 mouse_genomes_project 14 71490674 71492579 + MGP_WSBEiJ_P0039278 Tsc22d1 protein_coding protein_coding MGP_WSBEiJ_T0038557.1 MGP_WSBEiJ_G0020641.1 mouse_genomes_project 14 49097699 49101727 - Ppp1r3e protein_coding processed_transcript MGP_WSBEiJ_T0038558.1 MGP_WSBEiJ_G0020641.1 mouse_genomes_project 14 49097711 49108153 - MGP_WSBEiJ_P0038558 Ppp1r3e protein_coding protein_coding MGP_WSBEiJ_T0038559.1 MGP_WSBEiJ_G0020641.1 mouse_genomes_project 14 49106198 49107224 - Ppp1r3e protein_coding TEC MGP_WSBEiJ_T0038560.1 MGP_WSBEiJ_G0020641.1 mouse_genomes_project 14 49106198 49108141 - MGP_WSBEiJ_P0038560 Ppp1r3e protein_coding protein_coding MGP_WSBEiJ_T0002502.1 MGP_WSBEiJ_G0002412.1 mouse_genomes_project 14 48408514 48408571 + MGP_WSBEiJ_P0002502 Traj13 TR_J_gene TR_J_gene MGP_WSBEiJ_T0009818.1 MGP_WSBEiJ_G0007975.1 mouse_genomes_project 14 14834037 14834150 - Gm27532 miRNA miRNA MGP_WSBEiJ_T0003509.1 MGP_WSBEiJ_G0003188.1 mouse_genomes_project 14 74897274 74900110 + Gm9748 antisense antisense MGP_WSBEiJ_T0003510.1 MGP_WSBEiJ_G0003188.1 mouse_genomes_project 14 74897348 74900058 + Gm9748 antisense antisense MGP_WSBEiJ_T0038322.1 MGP_WSBEiJ_G0020584.1 mouse_genomes_project 14 44986146 44986859 - MGP_WSBEiJ_P0038322 Rnase11 protein_coding protein_coding MGP_WSBEiJ_T0038294.1 MGP_WSBEiJ_G0020576.1 mouse_genomes_project 14 44825177 44827044 - MGP_WSBEiJ_P0038294 Klhl33 protein_coding protein_coding MGP_WSBEiJ_T0037383.1 MGP_WSBEiJ_G0020298.1 mouse_genomes_project 14 90053 90524 + MGP_WSBEiJ_P0037383 Gm26661 protein_coding protein_coding MGP_WSBEiJ_T0097838.1 MGP_WSBEiJ_G0036501.1 mouse_genomes_project 14 33548107 33548271 + Gm25012 snRNA snRNA MGP_WSBEiJ_T0037561.1 MGP_WSBEiJ_G0020360.1 mouse_genomes_project 14 13459400 13460762 + MGP_WSBEiJ_P0037561 Chchd1 protein_coding protein_coding MGP_WSBEiJ_T0009822.1 MGP_WSBEiJ_G0007979.1 mouse_genomes_project 14 19715342 19715404 - Mir7672 miRNA miRNA MGP_WSBEiJ_T0037392.1 MGP_WSBEiJ_G0020303.1 mouse_genomes_project 14 412446 480501 + MGP_WSBEiJ_P0037392 Pxk protein_coding protein_coding MGP_WSBEiJ_T0037393.1 MGP_WSBEiJ_G0020303.1 mouse_genomes_project 14 412446 480501 + MGP_WSBEiJ_P0037393 Pxk protein_coding protein_coding MGP_WSBEiJ_T0009850.1 MGP_WSBEiJ_G0008007.1 mouse_genomes_project 14 65192439 65192521 + Mir320 miRNA miRNA MGP_WSBEiJ_T0039410.1 MGP_WSBEiJ_G0020943.1 mouse_genomes_project 14 99798075 99901460 + MGP_WSBEiJ_P0039410 Scel protein_coding protein_coding MGP_WSBEiJ_T0039411.1 MGP_WSBEiJ_G0020943.1 mouse_genomes_project 14 99813906 99901466 + MGP_WSBEiJ_P0039411 Scel protein_coding unknown_likely_coding MGP_WSBEiJ_T0097841.1 MGP_WSBEiJ_G0036504.1 mouse_genomes_project 14 42482691 42482798 - Gm25380 snRNA snRNA MGP_WSBEiJ_T0009815.1 MGP_WSBEiJ_G0007972.1 mouse_genomes_project 14 7500546 7500622 + Gm23087 miRNA miRNA MGP_WSBEiJ_T0000881.1 MGP_WSBEiJ_G0000819.1 mouse_genomes_project 14 46531521 46533859 - TEC TEC MGP_WSBEiJ_T0096780.1 MGP_WSBEiJ_G0035461.1 mouse_genomes_project 14 49673470 49675607 - pseudogene pseudogene MGP_WSBEiJ_T0037992.1 MGP_WSBEiJ_G0020462.1 mouse_genomes_project 14 25787924 25856471 + MGP_WSBEiJ_P0037992 Ercc6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0011176.1 MGP_WSBEiJ_G0009333.1 mouse_genomes_project 14 56216106 56216220 + Gm27845 misc_RNA misc_RNA MGP_WSBEiJ_T0006621.1 MGP_WSBEiJ_G0005471.1 mouse_genomes_project 14 64941345 64955863 + Gm26908 lincRNA lincRNA MGP_WSBEiJ_T0038334.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014013 46020774 + MGP_WSBEiJ_P0038334 Mettl17 protein_coding protein_coding MGP_WSBEiJ_T0038335.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014047 46020766 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0038336.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014049 46018488 + MGP_WSBEiJ_P0038336 Mettl17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038337.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014060 46020699 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0038338.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014060 46020699 + MGP_WSBEiJ_P0038338 Mettl17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038339.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014060 46020699 + MGP_WSBEiJ_P0038339 Mettl17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038340.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014083 46018206 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0038341.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014089 46014830 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0038342.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014106 46021784 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0038343.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014109 46017802 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0038344.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014117 46020641 + MGP_WSBEiJ_P0038344 Mettl17 protein_coding protein_coding MGP_WSBEiJ_T0038345.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014123 46016431 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0038346.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014125 46014834 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0038347.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014312 46014592 + MGP_WSBEiJ_P0038347 Mettl17 protein_coding protein_coding MGP_WSBEiJ_T0038348.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46014573 46019633 + MGP_WSBEiJ_P0038348 Mettl17 protein_coding protein_coding MGP_WSBEiJ_T0038349.1 MGP_WSBEiJ_G0020594.1 mouse_genomes_project 14 46016337 46017917 + Mettl17 protein_coding retained_intron MGP_WSBEiJ_T0011169.1 MGP_WSBEiJ_G0009326.1 mouse_genomes_project 14 25069436 25069734 - Gm22876 misc_RNA misc_RNA MGP_WSBEiJ_T0039456.1 MGP_WSBEiJ_G0020966.1 mouse_genomes_project 14 115844309 115937620 + MGP_WSBEiJ_P0039456 Cldn10 protein_coding protein_coding MGP_WSBEiJ_T0039457.1 MGP_WSBEiJ_G0020966.1 mouse_genomes_project 14 115844319 115937621 + MGP_WSBEiJ_P0039457 Cldn10 protein_coding protein_coding MGP_WSBEiJ_T0039458.1 MGP_WSBEiJ_G0020966.1 mouse_genomes_project 14 115916953 115938586 + MGP_WSBEiJ_P0039458 Cldn10 protein_coding protein_coding MGP_WSBEiJ_T0009821.1 MGP_WSBEiJ_G0007978.1 mouse_genomes_project 14 18738956 18739066 - Gm23701 miRNA miRNA MGP_WSBEiJ_T0038092.1 MGP_WSBEiJ_G0020503.1 mouse_genomes_project 14 30564058 30575894 - 2610528A11Rik protein_coding processed_transcript MGP_WSBEiJ_T0038093.1 MGP_WSBEiJ_G0020503.1 mouse_genomes_project 14 30564060 30571974 - MGP_WSBEiJ_P0038093 2610528A11Rik protein_coding protein_coding MGP_WSBEiJ_T0037908.1 MGP_WSBEiJ_G0020442.1 mouse_genomes_project 14 24540050 24576116 + MGP_WSBEiJ_P0037908 Capn7 protein_coding protein_coding MGP_WSBEiJ_T0037909.1 MGP_WSBEiJ_G0020442.1 mouse_genomes_project 14 24540087 24576118 + MGP_WSBEiJ_P0037909 Capn7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037910.1 MGP_WSBEiJ_G0020442.1 mouse_genomes_project 14 24540119 24576116 + MGP_WSBEiJ_P0037910 Capn7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038913.1 MGP_WSBEiJ_G0020761.1 mouse_genomes_project 14 57312046 57398127 - MGP_WSBEiJ_P0038913 Ints6 protein_coding protein_coding MGP_WSBEiJ_T0038914.1 MGP_WSBEiJ_G0020761.1 mouse_genomes_project 14 57330215 57397673 - MGP_WSBEiJ_P0038914 Ints6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039169.1 MGP_WSBEiJ_G0020864.1 mouse_genomes_project 14 67376167 67532245 - MGP_WSBEiJ_P0039169 Fndc3a protein_coding protein_coding MGP_WSBEiJ_T0039170.1 MGP_WSBEiJ_G0020864.1 mouse_genomes_project 14 67377750 67446386 - MGP_WSBEiJ_P0039170 Fndc3a protein_coding protein_coding MGP_WSBEiJ_T0039171.1 MGP_WSBEiJ_G0020864.1 mouse_genomes_project 14 67400351 67405045 - Fndc3a protein_coding retained_intron MGP_WSBEiJ_T0039172.1 MGP_WSBEiJ_G0020864.1 mouse_genomes_project 14 67405068 67549500 - MGP_WSBEiJ_P0039172 Fndc3a protein_coding protein_coding MGP_WSBEiJ_T0039173.1 MGP_WSBEiJ_G0020864.1 mouse_genomes_project 14 67414890 67493105 - MGP_WSBEiJ_P0039173 Fndc3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039174.1 MGP_WSBEiJ_G0020864.1 mouse_genomes_project 14 67441798 67549955 - Fndc3a protein_coding retained_intron MGP_WSBEiJ_T0039175.1 MGP_WSBEiJ_G0020864.1 mouse_genomes_project 14 67490275 67549801 - Fndc3a protein_coding retained_intron MGP_WSBEiJ_T0039352.1 MGP_WSBEiJ_G0020927.1 mouse_genomes_project 14 95108040 95137061 + MGP_WSBEiJ_P0039352 Bora protein_coding protein_coding MGP_WSBEiJ_T0003492.1 MGP_WSBEiJ_G0003175.1 mouse_genomes_project 14 58194999 58201173 + Gm17232 antisense antisense MGP_WSBEiJ_T0016832.1 MGP_WSBEiJ_G0014702.1 mouse_genomes_project 14 112311141 112323987 - 4930505G20Rik processed_transcript processed_transcript MGP_WSBEiJ_T0038917.1 MGP_WSBEiJ_G0020764.1 mouse_genomes_project 14 57656712 57659669 + MGP_WSBEiJ_P0038917 Defb47 protein_coding protein_coding MGP_WSBEiJ_T0037819.1 MGP_WSBEiJ_G0020426.1 mouse_genomes_project 14 24090183 24105287 - MGP_WSBEiJ_P0037819 Itih3 protein_coding protein_coding MGP_WSBEiJ_T0037820.1 MGP_WSBEiJ_G0020426.1 mouse_genomes_project 14 24090186 24105114 - Itih3 protein_coding retained_intron MGP_WSBEiJ_T0037821.1 MGP_WSBEiJ_G0020426.1 mouse_genomes_project 14 24090293 24105076 - MGP_WSBEiJ_P0037821 Itih3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037822.1 MGP_WSBEiJ_G0020426.1 mouse_genomes_project 14 24090293 24105076 - MGP_WSBEiJ_P0037822 Itih3 protein_coding protein_coding MGP_WSBEiJ_T0037823.1 MGP_WSBEiJ_G0020426.1 mouse_genomes_project 14 24091448 24096924 - MGP_WSBEiJ_P0037823 Itih3 protein_coding protein_coding MGP_WSBEiJ_T0037824.1 MGP_WSBEiJ_G0020426.1 mouse_genomes_project 14 24093498 24095666 - Itih3 protein_coding retained_intron MGP_WSBEiJ_T0038409.1 MGP_WSBEiJ_G0020605.1 mouse_genomes_project 14 46312832 46353655 - MGP_WSBEiJ_P0038409 Supt16 protein_coding protein_coding MGP_WSBEiJ_T0012743.1 MGP_WSBEiJ_G0010873.1 mouse_genomes_project 14 94755789 94756733 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039303.1 MGP_WSBEiJ_G0020906.1 mouse_genomes_project 14 74376922 74394071 - MGP_WSBEiJ_P0039303 Rgcc protein_coding protein_coding MGP_WSBEiJ_T0039201.1 MGP_WSBEiJ_G0020868.1 mouse_genomes_project 14 68017588 68118129 - Rb1 protein_coding processed_transcript MGP_WSBEiJ_T0039202.1 MGP_WSBEiJ_G0020868.1 mouse_genomes_project 14 68022026 68159629 - MGP_WSBEiJ_P0039202 Rb1 protein_coding protein_coding MGP_WSBEiJ_T0039203.1 MGP_WSBEiJ_G0020868.1 mouse_genomes_project 14 68023499 68029777 - Rb1 protein_coding retained_intron MGP_WSBEiJ_T0039205.1 MGP_WSBEiJ_G0020868.1 mouse_genomes_project 14 68066908 68068149 - Rb1 protein_coding processed_transcript MGP_WSBEiJ_T0039206.1 MGP_WSBEiJ_G0020868.1 mouse_genomes_project 14 68092683 68094605 - Rb1 protein_coding retained_intron MGP_WSBEiJ_T0039207.1 MGP_WSBEiJ_G0020868.1 mouse_genomes_project 14 68110601 68159448 - MGP_WSBEiJ_P0039207 Rb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096958.1 MGP_WSBEiJ_G0035639.1 mouse_genomes_project 14 61397851 61397941 - Gm23899 rRNA rRNA MGP_WSBEiJ_T0002664.1 MGP_WSBEiJ_G0002548.1 mouse_genomes_project 14 48138892 48139511 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0039298.1 MGP_WSBEiJ_G0020903.1 mouse_genomes_project 14 73621750 73801229 - MGP_WSBEiJ_P0039298 Dgkh protein_coding protein_coding MGP_WSBEiJ_T0039079.1 MGP_WSBEiJ_G0020828.1 mouse_genomes_project 14 64149860 64197365 - MGP_WSBEiJ_P0039079 Slc25a37 protein_coding protein_coding MGP_WSBEiJ_T0039080.1 MGP_WSBEiJ_G0020828.1 mouse_genomes_project 14 64149863 64197365 - Slc25a37 protein_coding retained_intron MGP_WSBEiJ_T0039081.1 MGP_WSBEiJ_G0020828.1 mouse_genomes_project 14 64152193 64197220 - MGP_WSBEiJ_P0039081 Slc25a37 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037907.1 MGP_WSBEiJ_G0020441.1 mouse_genomes_project 14 24461855 24526387 - MGP_WSBEiJ_P0037907 Dnah1 protein_coding protein_coding MGP_WSBEiJ_T0038785.1 MGP_WSBEiJ_G0020717.1 mouse_genomes_project 14 51515126 51526858 - MGP_WSBEiJ_P0038785 Gjb6 protein_coding protein_coding MGP_WSBEiJ_T0038786.1 MGP_WSBEiJ_G0020717.1 mouse_genomes_project 14 51516105 51526528 - MGP_WSBEiJ_P0038786 Gjb6 protein_coding protein_coding MGP_WSBEiJ_T0038787.1 MGP_WSBEiJ_G0020717.1 mouse_genomes_project 14 51522660 51523883 - Gjb6 protein_coding processed_transcript MGP_WSBEiJ_T0039497.1 MGP_WSBEiJ_G0020983.1 mouse_genomes_project 14 119330074 119385628 + MGP_WSBEiJ_P0039497 Tm9sf2 protein_coding protein_coding MGP_WSBEiJ_T0039498.1 MGP_WSBEiJ_G0020983.1 mouse_genomes_project 14 119330174 119361438 + MGP_WSBEiJ_P0039498 Tm9sf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039499.1 MGP_WSBEiJ_G0020983.1 mouse_genomes_project 14 119330304 119383528 + MGP_WSBEiJ_P0039499 Tm9sf2 protein_coding protein_coding MGP_WSBEiJ_T0002477.1 MGP_WSBEiJ_G0002387.1 mouse_genomes_project 14 48378885 48378946 + MGP_WSBEiJ_P0002477 Traj40 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038521.1 MGP_WSBEiJ_G0020633.1 mouse_genomes_project 14 48842190 48852140 - MGP_WSBEiJ_P0038521 Cdh24 protein_coding unknown_likely_coding MGP_WSBEiJ_T0002556.1 MGP_WSBEiJ_G0002458.1 mouse_genomes_project 14 46829817 46830324 + MGP_WSBEiJ_P0002556 TR_V_gene TR_V_gene MGP_WSBEiJ_T0037942.1 MGP_WSBEiJ_G0020451.1 mouse_genomes_project 14 25327719 25332763 - MGP_WSBEiJ_P0037942 Dph3 protein_coding protein_coding MGP_WSBEiJ_T0037943.1 MGP_WSBEiJ_G0020451.1 mouse_genomes_project 14 25327722 25332763 - MGP_WSBEiJ_P0037943 Dph3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037944.1 MGP_WSBEiJ_G0020451.1 mouse_genomes_project 14 25327722 25332763 - MGP_WSBEiJ_P0037944 Dph3 protein_coding protein_coding MGP_WSBEiJ_T0037945.1 MGP_WSBEiJ_G0020451.1 mouse_genomes_project 14 25329911 25332763 - MGP_WSBEiJ_P0037945 Dph3 protein_coding protein_coding MGP_WSBEiJ_T0037946.1 MGP_WSBEiJ_G0020451.1 mouse_genomes_project 14 25330025 25332846 - Dph3 protein_coding processed_transcript MGP_WSBEiJ_T0037947.1 MGP_WSBEiJ_G0020451.1 mouse_genomes_project 14 25330029 25332440 - Dph3 protein_coding retained_intron MGP_WSBEiJ_T0037948.1 MGP_WSBEiJ_G0020451.1 mouse_genomes_project 14 25331849 25332763 - MGP_WSBEiJ_P0037948 Dph3 protein_coding protein_coding MGP_WSBEiJ_T0039160.1 MGP_WSBEiJ_G0020862.1 mouse_genomes_project 14 65525201 65533109 + Dok2 protein_coding processed_transcript MGP_WSBEiJ_T0039161.1 MGP_WSBEiJ_G0020862.1 mouse_genomes_project 14 65525214 65531675 + Dok2 protein_coding processed_transcript MGP_WSBEiJ_T0039162.1 MGP_WSBEiJ_G0020862.1 mouse_genomes_project 14 65532808 65535544 + Dok2 protein_coding processed_transcript MGP_WSBEiJ_T0039163.1 MGP_WSBEiJ_G0020862.1 mouse_genomes_project 14 65533835 65538027 + MGP_WSBEiJ_P0039163 Dok2 protein_coding protein_coding MGP_WSBEiJ_T0039164.1 MGP_WSBEiJ_G0020862.1 mouse_genomes_project 14 65535410 65536401 + Dok2 protein_coding retained_intron MGP_WSBEiJ_T0039165.1 MGP_WSBEiJ_G0020862.1 mouse_genomes_project 14 65535709 65537084 + Dok2 protein_coding processed_transcript MGP_WSBEiJ_T0039166.1 MGP_WSBEiJ_G0020862.1 mouse_genomes_project 14 65535894 65537093 + Dok2 protein_coding processed_transcript MGP_WSBEiJ_T0039167.1 MGP_WSBEiJ_G0020862.1 mouse_genomes_project 14 65536241 65537127 + Dok2 protein_coding retained_intron MGP_WSBEiJ_T0039426.1 MGP_WSBEiJ_G0020949.1 mouse_genomes_project 14 101564916 101617830 + MGP_WSBEiJ_P0039426 Ndfip2 protein_coding protein_coding MGP_WSBEiJ_T0039427.1 MGP_WSBEiJ_G0020949.1 mouse_genomes_project 14 101565061 101617836 + MGP_WSBEiJ_P0039427 Ndfip2 protein_coding protein_coding MGP_WSBEiJ_T0039428.1 MGP_WSBEiJ_G0020949.1 mouse_genomes_project 14 101565161 101602016 + Ndfip2 protein_coding retained_intron MGP_WSBEiJ_T0039429.1 MGP_WSBEiJ_G0020949.1 mouse_genomes_project 14 101599355 101617402 + Ndfip2 protein_coding retained_intron MGP_WSBEiJ_T0039430.1 MGP_WSBEiJ_G0020949.1 mouse_genomes_project 14 101599751 101617336 + Ndfip2 protein_coding retained_intron MGP_WSBEiJ_T0039431.1 MGP_WSBEiJ_G0020949.1 mouse_genomes_project 14 101601616 101617402 + Ndfip2 protein_coding processed_transcript MGP_WSBEiJ_T0038846.1 MGP_WSBEiJ_G0020734.1 mouse_genomes_project 14 53825798 53891318 - MGP_WSBEiJ_P0038846 Phf11c protein_coding protein_coding MGP_WSBEiJ_T0016811.1 MGP_WSBEiJ_G0014693.1 mouse_genomes_project 14 62184020 62196442 - 1700120O09Rik processed_transcript processed_transcript MGP_WSBEiJ_T0038199.1 MGP_WSBEiJ_G0020540.1 mouse_genomes_project 14 41249482 41278473 - MGP_WSBEiJ_P0038199 Atg14 protein_coding protein_coding MGP_WSBEiJ_T0039289.1 MGP_WSBEiJ_G0020898.1 mouse_genomes_project 14 72842835 72893194 - MGP_WSBEiJ_P0039289 Dnajc15 protein_coding protein_coding MGP_WSBEiJ_T0096781.1 MGP_WSBEiJ_G0035462.1 mouse_genomes_project 14 99231618 99235944 - pseudogene pseudogene MGP_WSBEiJ_T0037430.1 MGP_WSBEiJ_G0020315.1 mouse_genomes_project 14 4776463 5250235 - MGP_WSBEiJ_P0037430 Cadps protein_coding unknown_likely_coding MGP_WSBEiJ_T0037431.1 MGP_WSBEiJ_G0020315.1 mouse_genomes_project 14 4776465 5250576 - MGP_WSBEiJ_P0037431 Cadps protein_coding protein_coding MGP_WSBEiJ_T0037432.1 MGP_WSBEiJ_G0020315.1 mouse_genomes_project 14 4776467 5250576 - MGP_WSBEiJ_P0037432 Cadps protein_coding protein_coding MGP_WSBEiJ_T0037433.1 MGP_WSBEiJ_G0020315.1 mouse_genomes_project 14 4776467 5250576 - MGP_WSBEiJ_P0037433 Cadps protein_coding protein_coding MGP_WSBEiJ_T0037434.1 MGP_WSBEiJ_G0020315.1 mouse_genomes_project 14 4776467 5250576 - MGP_WSBEiJ_P0037434 Cadps protein_coding protein_coding MGP_WSBEiJ_T0039394.1 MGP_WSBEiJ_G0020940.1 mouse_genomes_project 14 99327617 99335704 + MGP_WSBEiJ_P0039394 Cln5 protein_coding protein_coding MGP_WSBEiJ_T0002483.1 MGP_WSBEiJ_G0002393.1 mouse_genomes_project 14 48386334 48386391 + MGP_WSBEiJ_P0002483 Traj33 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002655.1 MGP_WSBEiJ_G0002539.1 mouse_genomes_project 14 47063791 47064076 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0012709.1 MGP_WSBEiJ_G0010839.1 mouse_genomes_project 14 39334881 39335074 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038178.1 MGP_WSBEiJ_G0020534.1 mouse_genomes_project 14 40928085 40963663 - MGP_WSBEiJ_P0038178 Wdhd1 protein_coding protein_coding MGP_WSBEiJ_T0038179.1 MGP_WSBEiJ_G0020534.1 mouse_genomes_project 14 40928092 40963898 - MGP_WSBEiJ_P0038179 Wdhd1 protein_coding protein_coding MGP_WSBEiJ_T0038180.1 MGP_WSBEiJ_G0020534.1 mouse_genomes_project 14 40928092 40963856 - MGP_WSBEiJ_P0038180 Wdhd1 protein_coding protein_coding MGP_WSBEiJ_T0038181.1 MGP_WSBEiJ_G0020534.1 mouse_genomes_project 14 40944848 40963898 - MGP_WSBEiJ_P0038181 Wdhd1 protein_coding protein_coding MGP_WSBEiJ_T0038182.1 MGP_WSBEiJ_G0020534.1 mouse_genomes_project 14 40959281 40963873 - Wdhd1 protein_coding retained_intron MGP_WSBEiJ_T0039338.1 MGP_WSBEiJ_G0020922.1 mouse_genomes_project 14 88773479 89693782 - MGP_WSBEiJ_P0039338 Pcdh9 protein_coding protein_coding MGP_WSBEiJ_T0039339.1 MGP_WSBEiJ_G0020922.1 mouse_genomes_project 14 88773771 89693782 - MGP_WSBEiJ_P0039339 Pcdh9 protein_coding protein_coding MGP_WSBEiJ_T0039340.1 MGP_WSBEiJ_G0020922.1 mouse_genomes_project 14 88774044 89693742 - MGP_WSBEiJ_P0039340 Pcdh9 protein_coding protein_coding MGP_WSBEiJ_T0039341.1 MGP_WSBEiJ_G0020922.1 mouse_genomes_project 14 88774270 89693272 - MGP_WSBEiJ_P0039341 Pcdh9 protein_coding protein_coding MGP_WSBEiJ_T0039342.1 MGP_WSBEiJ_G0020922.1 mouse_genomes_project 14 88775584 89691852 - MGP_WSBEiJ_P0039342 Pcdh9 protein_coding protein_coding MGP_WSBEiJ_T0039343.1 MGP_WSBEiJ_G0020922.1 mouse_genomes_project 14 88935061 89688868 - MGP_WSBEiJ_P0039343 Pcdh9 protein_coding protein_coding MGP_WSBEiJ_T0039344.1 MGP_WSBEiJ_G0020922.1 mouse_genomes_project 14 89688684 89689344 - Pcdh9 protein_coding retained_intron MGP_WSBEiJ_T0039345.1 MGP_WSBEiJ_G0020922.1 mouse_genomes_project 14 89689232 89693792 - MGP_WSBEiJ_P0039345 Pcdh9 protein_coding protein_coding MGP_WSBEiJ_T0038742.1 MGP_WSBEiJ_G0020688.1 mouse_genomes_project 14 50089776 50098864 + MGP_WSBEiJ_P0038742 Nfatc4 protein_coding protein_coding MGP_WSBEiJ_T0038743.1 MGP_WSBEiJ_G0020688.1 mouse_genomes_project 14 50089776 50098864 + MGP_WSBEiJ_P0038743 Nfatc4 protein_coding protein_coding MGP_WSBEiJ_T0016774.1 MGP_WSBEiJ_G0014681.1 mouse_genomes_project 14 40237 90118 - Gm10044 processed_transcript antisense MGP_WSBEiJ_T0016776.1 MGP_WSBEiJ_G0014681.1 mouse_genomes_project 14 52390 90042 - Gm10044 processed_transcript antisense MGP_WSBEiJ_T0016777.1 MGP_WSBEiJ_G0014681.1 mouse_genomes_project 14 60734 73071 - Gm10044 processed_transcript antisense MGP_WSBEiJ_T0016778.1 MGP_WSBEiJ_G0014681.1 mouse_genomes_project 14 68905 73141 - Gm10044 processed_transcript retained_intron MGP_WSBEiJ_T0016779.1 MGP_WSBEiJ_G0014681.1 mouse_genomes_project 14 69138 90020 - Gm10044 processed_transcript antisense MGP_WSBEiJ_T0097831.1 MGP_WSBEiJ_G0036494.1 mouse_genomes_project 14 11004175 11004331 + Gm22350 snRNA snRNA MGP_WSBEiJ_T0038121.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38716295 38808931 - MGP_WSBEiJ_P0038121 Txndc16 protein_coding protein_coding MGP_WSBEiJ_T0038122.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38716746 38808962 - MGP_WSBEiJ_P0038122 Txndc16 protein_coding protein_coding MGP_WSBEiJ_T0038123.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38716754 38809865 - MGP_WSBEiJ_P0038123 Txndc16 protein_coding protein_coding MGP_WSBEiJ_T0038124.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38748657 38753159 - Txndc16 protein_coding retained_intron MGP_WSBEiJ_T0038125.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38751188 38808927 - Txndc16 protein_coding retained_intron MGP_WSBEiJ_T0038126.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38752057 38808919 - Txndc16 protein_coding retained_intron MGP_WSBEiJ_T0038127.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38795359 38808934 - MGP_WSBEiJ_P0038127 Txndc16 protein_coding protein_coding MGP_WSBEiJ_T0038128.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38796638 38808939 - Txndc16 protein_coding retained_intron MGP_WSBEiJ_T0038129.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38801574 38808901 - Txndc16 protein_coding processed_transcript MGP_WSBEiJ_T0038130.1 MGP_WSBEiJ_G0020518.1 mouse_genomes_project 14 38807424 38808927 - Txndc16 protein_coding processed_transcript MGP_WSBEiJ_T0039288.1 MGP_WSBEiJ_G0020897.1 mouse_genomes_project 14 72810362 72814132 - MGP_WSBEiJ_P0039288 Gm1587 protein_coding protein_coding MGP_WSBEiJ_T0002496.1 MGP_WSBEiJ_G0002406.1 mouse_genomes_project 14 48402235 48402293 + MGP_WSBEiJ_P0002496 Traj20 TR_J_gene TR_J_gene MGP_WSBEiJ_T0039500.1 MGP_WSBEiJ_G0020984.1 mouse_genomes_project 14 119411073 119643423 + MGP_WSBEiJ_P0039500 Clybl protein_coding protein_coding MGP_WSBEiJ_T0009835.1 MGP_WSBEiJ_G0007992.1 mouse_genomes_project 14 50362633 50362701 - Mir6949 miRNA miRNA MGP_WSBEiJ_T0002563.1 MGP_WSBEiJ_G0002463.1 mouse_genomes_project 14 46875552 46876144 + MGP_WSBEiJ_P0002563 Trav7d-3 TR_V_gene TR_V_gene MGP_WSBEiJ_T0097852.1 MGP_WSBEiJ_G0036515.1 mouse_genomes_project 14 51232220 51232279 - Gm22218 snRNA snRNA MGP_WSBEiJ_T0038088.1 MGP_WSBEiJ_G0020499.1 mouse_genomes_project 14 30498884 30511183 - MGP_WSBEiJ_P0038088 Rgr protein_coding protein_coding MGP_WSBEiJ_T0037659.1 MGP_WSBEiJ_G0020380.1 mouse_genomes_project 14 17412993 17417738 + MGP_WSBEiJ_P0037659 Rps24 protein_coding protein_coding MGP_WSBEiJ_T0037660.1 MGP_WSBEiJ_G0020380.1 mouse_genomes_project 14 17412993 17418448 + MGP_WSBEiJ_P0037660 Rps24 protein_coding protein_coding MGP_WSBEiJ_T0039093.1 MGP_WSBEiJ_G0020834.1 mouse_genomes_project 14 64306928 64394664 + MGP_WSBEiJ_P0039093 Loxl2 protein_coding protein_coding MGP_WSBEiJ_T0039094.1 MGP_WSBEiJ_G0020834.1 mouse_genomes_project 14 64307337 64392725 + MGP_WSBEiJ_P0039094 Loxl2 protein_coding protein_coding MGP_WSBEiJ_T0038042.1 MGP_WSBEiJ_G0020483.1 mouse_genomes_project 14 27537194 27544387 - MGP_WSBEiJ_P0038042 Gprin2 protein_coding protein_coding MGP_WSBEiJ_T0100013.1 MGP_WSBEiJ_G0038651.1 mouse_genomes_project 14 23554789 23555240 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0038992.1 MGP_WSBEiJ_G0020797.1 mouse_genomes_project 14 60584912 60599865 - MGP_WSBEiJ_P0038992 Esco2 protein_coding protein_coding MGP_WSBEiJ_T0038993.1 MGP_WSBEiJ_G0020797.1 mouse_genomes_project 14 60591886 60593082 - Esco2 protein_coding processed_transcript MGP_WSBEiJ_T0038994.1 MGP_WSBEiJ_G0020797.1 mouse_genomes_project 14 60592835 60594816 - Esco2 protein_coding processed_transcript MGP_WSBEiJ_T0039346.1 MGP_WSBEiJ_G0020923.1 mouse_genomes_project 14 91790313 91791822 + MGP_WSBEiJ_P0039346 4921530L21Rik protein_coding protein_coding MGP_WSBEiJ_T0000901.1 MGP_WSBEiJ_G0000839.1 mouse_genomes_project 14 113735737 113736646 + TEC TEC MGP_WSBEiJ_T0006562.1 MGP_WSBEiJ_G0005431.1 mouse_genomes_project 14 17549046 17549769 + 4930428N03Rik lincRNA lincRNA MGP_WSBEiJ_T0006563.1 MGP_WSBEiJ_G0005431.1 mouse_genomes_project 14 17549067 17557888 + 4930428N03Rik lincRNA lincRNA MGP_WSBEiJ_T0039393.1 MGP_WSBEiJ_G0020939.1 mouse_genomes_project 14 99302421 99314838 + MGP_WSBEiJ_P0039393 Acod1 protein_coding protein_coding MGP_WSBEiJ_T0039084.1 MGP_WSBEiJ_G0020831.1 mouse_genomes_project 14 64202634 64206760 - MGP_WSBEiJ_P0039084 Gm27179 protein_coding protein_coding MGP_WSBEiJ_T0003498.1 MGP_WSBEiJ_G0003181.1 mouse_genomes_project 14 64169851 64172743 + Gm27222 antisense antisense MGP_WSBEiJ_T0003443.1 MGP_WSBEiJ_G0003140.1 mouse_genomes_project 14 6371021 6410508 + Gm11100 antisense antisense MGP_WSBEiJ_T0003444.1 MGP_WSBEiJ_G0003140.1 mouse_genomes_project 14 6393091 6410508 + Gm11100 antisense antisense MGP_WSBEiJ_T0037972.1 MGP_WSBEiJ_G0020456.1 mouse_genomes_project 14 25426304 25447868 - MGP_WSBEiJ_P0037972 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037973.1 MGP_WSBEiJ_G0020456.1 mouse_genomes_project 14 25426632 25447834 - MGP_WSBEiJ_P0037973 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037974.1 MGP_WSBEiJ_G0020456.1 mouse_genomes_project 14 25437401 25447816 - protein_coding retained_intron MGP_WSBEiJ_T0037975.1 MGP_WSBEiJ_G0020456.1 mouse_genomes_project 14 25439805 25447841 - protein_coding retained_intron MGP_WSBEiJ_T0037976.1 MGP_WSBEiJ_G0020456.1 mouse_genomes_project 14 25444840 25447867 - protein_coding retained_intron MGP_WSBEiJ_T0039073.1 MGP_WSBEiJ_G0020823.1 mouse_genomes_project 14 63463262 63481834 - MGP_WSBEiJ_P0039073 Adamdec1 protein_coding protein_coding MGP_WSBEiJ_T0099115.1 MGP_WSBEiJ_G0037778.1 mouse_genomes_project 14 88125598 88125728 - Gm24127 snoRNA snoRNA MGP_WSBEiJ_T0039347.1 MGP_WSBEiJ_G0020924.1 mouse_genomes_project 14 92020917 92436593 - MGP_WSBEiJ_P0039347 Klhl1 protein_coding protein_coding MGP_WSBEiJ_T0002498.1 MGP_WSBEiJ_G0002408.1 mouse_genomes_project 14 48403545 48403611 + MGP_WSBEiJ_P0002498 Traj18 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038056.1 MGP_WSBEiJ_G0020490.1 mouse_genomes_project 14 27764379 27861210 - MGP_WSBEiJ_P0038056 Bmpr1a protein_coding protein_coding MGP_WSBEiJ_T0038057.1 MGP_WSBEiJ_G0020490.1 mouse_genomes_project 14 27768141 27817728 - MGP_WSBEiJ_P0038057 Bmpr1a protein_coding protein_coding MGP_WSBEiJ_T0038058.1 MGP_WSBEiJ_G0020490.1 mouse_genomes_project 14 27790682 27861864 - MGP_WSBEiJ_P0038058 Bmpr1a protein_coding protein_coding MGP_WSBEiJ_T0038059.1 MGP_WSBEiJ_G0020490.1 mouse_genomes_project 14 27801093 27861051 - MGP_WSBEiJ_P0038059 Bmpr1a protein_coding protein_coding MGP_WSBEiJ_T0039097.1 MGP_WSBEiJ_G0020835.1 mouse_genomes_project 14 64396136 64406310 - MGP_WSBEiJ_P0039097 R3hcc1 protein_coding protein_coding MGP_WSBEiJ_T0039098.1 MGP_WSBEiJ_G0020835.1 mouse_genomes_project 14 64396137 64406219 - MGP_WSBEiJ_P0039098 R3hcc1 protein_coding protein_coding MGP_WSBEiJ_T0039099.1 MGP_WSBEiJ_G0020835.1 mouse_genomes_project 14 64397162 64398842 - R3hcc1 protein_coding retained_intron MGP_WSBEiJ_T0039100.1 MGP_WSBEiJ_G0020835.1 mouse_genomes_project 14 64402298 64404037 - R3hcc1 protein_coding retained_intron MGP_WSBEiJ_T0039101.1 MGP_WSBEiJ_G0020835.1 mouse_genomes_project 14 64404348 64406279 - R3hcc1 protein_coding processed_transcript MGP_WSBEiJ_T0037427.1 MGP_WSBEiJ_G0020313.1 mouse_genomes_project 14 4683499 4703819 + MGP_WSBEiJ_P0037427 3830406C13Rik protein_coding protein_coding MGP_WSBEiJ_T0037428.1 MGP_WSBEiJ_G0020313.1 mouse_genomes_project 14 4683499 4703819 + MGP_WSBEiJ_P0037428 3830406C13Rik protein_coding protein_coding MGP_WSBEiJ_T0097835.1 MGP_WSBEiJ_G0036498.1 mouse_genomes_project 14 20577462 20577571 + Gm22485 snRNA snRNA MGP_WSBEiJ_T0000887.1 MGP_WSBEiJ_G0000825.1 mouse_genomes_project 14 56271958 56274114 + TEC TEC MGP_WSBEiJ_T0009832.1 MGP_WSBEiJ_G0007989.1 mouse_genomes_project 14 48853892 48853954 - Mir6948 miRNA miRNA MGP_WSBEiJ_T0038240.1 MGP_WSBEiJ_G0020545.1 mouse_genomes_project 14 42815150 42870134 - MGP_WSBEiJ_P0038240 Exoc5 protein_coding protein_coding MGP_WSBEiJ_T0038241.1 MGP_WSBEiJ_G0020545.1 mouse_genomes_project 14 42816752 42869877 - MGP_WSBEiJ_P0038241 Exoc5 protein_coding protein_coding MGP_WSBEiJ_T0038242.1 MGP_WSBEiJ_G0020545.1 mouse_genomes_project 14 42818470 42822792 - Exoc5 protein_coding retained_intron MGP_WSBEiJ_T0038243.1 MGP_WSBEiJ_G0020545.1 mouse_genomes_project 14 42819751 42826270 - MGP_WSBEiJ_P0038243 Exoc5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038244.1 MGP_WSBEiJ_G0020545.1 mouse_genomes_project 14 42820458 42826534 - Exoc5 protein_coding retained_intron MGP_WSBEiJ_T0038245.1 MGP_WSBEiJ_G0020545.1 mouse_genomes_project 14 42832403 42837502 - Exoc5 protein_coding retained_intron MGP_WSBEiJ_T0038246.1 MGP_WSBEiJ_G0020545.1 mouse_genomes_project 14 42836954 42852367 - MGP_WSBEiJ_P0038246 Exoc5 protein_coding protein_coding MGP_WSBEiJ_T0006628.1 MGP_WSBEiJ_G0005477.1 mouse_genomes_project 14 99231618 99235944 + Gm26778 lincRNA lincRNA MGP_WSBEiJ_T0002575.1 MGP_WSBEiJ_G0002474.1 mouse_genomes_project 14 46965717 46966285 + MGP_WSBEiJ_P0002575 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002576.1 MGP_WSBEiJ_G0002474.1 mouse_genomes_project 14 46965806 46966285 + MGP_WSBEiJ_P0002576 TR_V_gene TR_V_gene MGP_WSBEiJ_T0011170.1 MGP_WSBEiJ_G0009327.1 mouse_genomes_project 14 25267342 25267439 + Gm26045 misc_RNA misc_RNA MGP_WSBEiJ_T0038326.1 MGP_WSBEiJ_G0020588.1 mouse_genomes_project 14 45036909 45053009 + MGP_WSBEiJ_P0038326 Rnase4 protein_coding protein_coding MGP_WSBEiJ_T0038328.1 MGP_WSBEiJ_G0020588.1 mouse_genomes_project 14 45041740 45053009 + MGP_WSBEiJ_P0038328 Rnase4 protein_coding protein_coding MGP_WSBEiJ_T0039007.1 MGP_WSBEiJ_G0020802.1 mouse_genomes_project 14 60804342 60863029 - MGP_WSBEiJ_P0039007 Adam2 protein_coding protein_coding MGP_WSBEiJ_T0037750.1 MGP_WSBEiJ_G0020406.1 mouse_genomes_project 14 20310787 20491176 + MGP_WSBEiJ_P0037750 Arhgef3 protein_coding protein_coding MGP_WSBEiJ_T0037751.1 MGP_WSBEiJ_G0020406.1 mouse_genomes_project 14 20448988 20491191 + MGP_WSBEiJ_P0037751 Arhgef3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0097874.1 MGP_WSBEiJ_G0036537.1 mouse_genomes_project 14 102588794 102588925 - Gm23459 snRNA snRNA MGP_WSBEiJ_T0038430.1 MGP_WSBEiJ_G0020608.1 mouse_genomes_project 14 46440694 46457861 + MGP_WSBEiJ_P0038430 Tox4 protein_coding protein_coding MGP_WSBEiJ_T0038431.1 MGP_WSBEiJ_G0020608.1 mouse_genomes_project 14 46441113 46453814 + Tox4 protein_coding retained_intron MGP_WSBEiJ_T0038432.1 MGP_WSBEiJ_G0020608.1 mouse_genomes_project 14 46441165 46441665 + Tox4 protein_coding retained_intron MGP_WSBEiJ_T0038433.1 MGP_WSBEiJ_G0020608.1 mouse_genomes_project 14 46441280 46448535 + Tox4 protein_coding retained_intron MGP_WSBEiJ_T0038434.1 MGP_WSBEiJ_G0020608.1 mouse_genomes_project 14 46446917 46448155 + Tox4 protein_coding processed_transcript MGP_WSBEiJ_T0039068.1 MGP_WSBEiJ_G0020820.1 mouse_genomes_project 14 62976756 63021911 - MGP_WSBEiJ_P0039068 Nefm protein_coding protein_coding MGP_WSBEiJ_T0039070.1 MGP_WSBEiJ_G0020820.1 mouse_genomes_project 14 63016400 63021911 - MGP_WSBEiJ_P0039070 Nefm protein_coding protein_coding MGP_WSBEiJ_T0039321.1 MGP_WSBEiJ_G0020915.1 mouse_genomes_project 14 74894141 74898679 - MGP_WSBEiJ_P0039321 Pcdh8 protein_coding protein_coding MGP_WSBEiJ_T0039322.1 MGP_WSBEiJ_G0020915.1 mouse_genomes_project 14 74894146 74898679 - MGP_WSBEiJ_P0039322 Pcdh8 protein_coding protein_coding MGP_WSBEiJ_T0039323.1 MGP_WSBEiJ_G0020915.1 mouse_genomes_project 14 74894150 74898679 - Pcdh8 protein_coding retained_intron MGP_WSBEiJ_T0039324.1 MGP_WSBEiJ_G0020915.1 mouse_genomes_project 14 74896398 74898571 - Pcdh8 protein_coding processed_transcript MGP_WSBEiJ_T0002531.1 MGP_WSBEiJ_G0002439.1 mouse_genomes_project 14 48367281 48367324 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0037442.1 MGP_WSBEiJ_G0020319.1 mouse_genomes_project 14 6409787 6423164 - MGP_WSBEiJ_P0037442 Thoc7 protein_coding protein_coding MGP_WSBEiJ_T0038060.1 MGP_WSBEiJ_G0020491.1 mouse_genomes_project 14 27870128 27881867 - MGP_WSBEiJ_P0038060 9230112D13Rik protein_coding protein_coding MGP_WSBEiJ_T0000898.1 MGP_WSBEiJ_G0000836.1 mouse_genomes_project 14 95852420 95905372 - TEC TEC MGP_WSBEiJ_T0012746.1 MGP_WSBEiJ_G0010876.1 mouse_genomes_project 14 95949317 95949614 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039145.1 MGP_WSBEiJ_G0020853.1 mouse_genomes_project 14 65287129 65296174 + MGP_WSBEiJ_P0039145 Lgi3 protein_coding protein_coding MGP_WSBEiJ_T0038984.1 MGP_WSBEiJ_G0020794.1 mouse_genomes_project 14 60347685 60401273 + MGP_WSBEiJ_P0038984 Nuggc protein_coding protein_coding MGP_WSBEiJ_T0038985.1 MGP_WSBEiJ_G0020794.1 mouse_genomes_project 14 60354386 60401186 + MGP_WSBEiJ_P0038985 Nuggc protein_coding protein_coding MGP_WSBEiJ_T0037899.1 MGP_WSBEiJ_G0020440.1 mouse_genomes_project 14 24452919 24461425 + MGP_WSBEiJ_P0037899 Bap1 protein_coding protein_coding MGP_WSBEiJ_T0037900.1 MGP_WSBEiJ_G0020440.1 mouse_genomes_project 14 24452972 24454484 + Bap1 protein_coding retained_intron MGP_WSBEiJ_T0037901.1 MGP_WSBEiJ_G0020440.1 mouse_genomes_project 14 24452980 24455671 + Bap1 protein_coding retained_intron MGP_WSBEiJ_T0037902.1 MGP_WSBEiJ_G0020440.1 mouse_genomes_project 14 24453007 24461411 + Bap1 protein_coding retained_intron MGP_WSBEiJ_T0037903.1 MGP_WSBEiJ_G0020440.1 mouse_genomes_project 14 24453049 24456619 + MGP_WSBEiJ_P0037903 Bap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037904.1 MGP_WSBEiJ_G0020440.1 mouse_genomes_project 14 24457749 24460005 + MGP_WSBEiJ_P0037904 Bap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037905.1 MGP_WSBEiJ_G0020440.1 mouse_genomes_project 14 24458019 24459122 + Bap1 protein_coding retained_intron MGP_WSBEiJ_T0037906.1 MGP_WSBEiJ_G0020440.1 mouse_genomes_project 14 24458971 24460369 + Bap1 protein_coding retained_intron MGP_WSBEiJ_T0016810.1 MGP_WSBEiJ_G0014692.1 mouse_genomes_project 14 62085643 62086335 - Gm20675 processed_transcript processed_transcript MGP_WSBEiJ_T0002572.1 MGP_WSBEiJ_G0002471.1 mouse_genomes_project 14 46920397 46920867 + MGP_WSBEiJ_P0002572 TR_V_gene TR_V_gene MGP_WSBEiJ_T0038784.1 MGP_WSBEiJ_G0020716.1 mouse_genomes_project 14 51500655 51504210 - MGP_WSBEiJ_P0038784 Gm4491 protein_coding protein_coding MGP_WSBEiJ_T0038961.1 MGP_WSBEiJ_G0020783.1 mouse_genomes_project 14 58823510 58832886 + MGP_WSBEiJ_P0038961 Prss52 protein_coding protein_coding MGP_WSBEiJ_T0006564.1 MGP_WSBEiJ_G0005432.1 mouse_genomes_project 14 17795084 17799103 + Gm10398 lincRNA lincRNA MGP_WSBEiJ_T0099109.1 MGP_WSBEiJ_G0037772.1 mouse_genomes_project 14 73661708 73661830 + Gm26251 snoRNA snoRNA MGP_WSBEiJ_T0038646.1 MGP_WSBEiJ_G0020665.1 mouse_genomes_project 14 49840540 49841874 + MGP_WSBEiJ_P0038646 Fitm1 protein_coding protein_coding MGP_WSBEiJ_T0012729.1 MGP_WSBEiJ_G0010859.1 mouse_genomes_project 14 59572729 59573048 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038659.1 MGP_WSBEiJ_G0020667.1 mouse_genomes_project 14 49846454 49851385 - MGP_WSBEiJ_P0038659 Emc9 protein_coding protein_coding MGP_WSBEiJ_T0038660.1 MGP_WSBEiJ_G0020667.1 mouse_genomes_project 14 49846459 49847363 - Emc9 protein_coding retained_intron MGP_WSBEiJ_T0038661.1 MGP_WSBEiJ_G0020667.1 mouse_genomes_project 14 49846460 49851741 - MGP_WSBEiJ_P0038661 Emc9 protein_coding protein_coding MGP_WSBEiJ_T0038662.1 MGP_WSBEiJ_G0020667.1 mouse_genomes_project 14 49849811 49851650 - Emc9 protein_coding retained_intron MGP_WSBEiJ_T0039279.1 MGP_WSBEiJ_G0020893.1 mouse_genomes_project 14 71522259 71546970 - MGP_WSBEiJ_P0039279 Serp2 protein_coding protein_coding MGP_WSBEiJ_T0037699.1 MGP_WSBEiJ_G0020393.1 mouse_genomes_project 14 18893945 18899276 + protein_coding processed_transcript MGP_WSBEiJ_T0037704.1 MGP_WSBEiJ_G0020393.1 mouse_genomes_project 14 18895741 18903298 + protein_coding processed_transcript MGP_WSBEiJ_T0037708.1 MGP_WSBEiJ_G0020393.1 mouse_genomes_project 14 18898773 18905928 + MGP_WSBEiJ_P0037708 protein_coding protein_coding MGP_WSBEiJ_T0002566.1 MGP_WSBEiJ_G0002465.1 mouse_genomes_project 14 46899370 46899919 + MGP_WSBEiJ_P0002566 TR_V_gene TR_V_gene MGP_WSBEiJ_T0100570.1 MGP_WSBEiJ_G0039028.1 mouse_genomes_project 14 18789319 18799726 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006559.1 MGP_WSBEiJ_G0005429.1 mouse_genomes_project 14 17533468 17543952 - lincRNA lincRNA MGP_WSBEiJ_T0006560.1 MGP_WSBEiJ_G0005429.1 mouse_genomes_project 14 17541758 17543945 - lincRNA lincRNA MGP_WSBEiJ_T0099095.1 MGP_WSBEiJ_G0037758.1 mouse_genomes_project 14 50575632 50575758 + Gm24118 snoRNA snoRNA MGP_WSBEiJ_T0006591.1 MGP_WSBEiJ_G0005450.1 mouse_genomes_project 14 43967165 43969714 + lincRNA lincRNA MGP_WSBEiJ_T0039507.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119780472 119831391 + Pcca protein_coding retained_intron MGP_WSBEiJ_T0039508.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119780479 119867528 + MGP_WSBEiJ_P0039508 Pcca protein_coding protein_coding MGP_WSBEiJ_T0039509.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119780487 120153079 + MGP_WSBEiJ_P0039509 Pcca protein_coding protein_coding MGP_WSBEiJ_T0039510.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119780493 119907683 + MGP_WSBEiJ_P0039510 Pcca protein_coding protein_coding MGP_WSBEiJ_T0039511.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119831097 120152963 + MGP_WSBEiJ_P0039511 Pcca protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039512.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119852400 119923160 + Pcca protein_coding processed_transcript MGP_WSBEiJ_T0039513.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119979418 120001788 + MGP_WSBEiJ_P0039513 Pcca protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039514.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119979444 120152960 + MGP_WSBEiJ_P0039514 Pcca protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039515.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 119979508 120075017 + Pcca protein_coding processed_transcript MGP_WSBEiJ_T0039516.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 120001692 120075363 + Pcca protein_coding retained_intron MGP_WSBEiJ_T0039517.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 120050069 120152955 + MGP_WSBEiJ_P0039517 Pcca protein_coding protein_coding MGP_WSBEiJ_T0039519.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 120139069 120154235 + Pcca protein_coding processed_transcript MGP_WSBEiJ_T0039520.1 MGP_WSBEiJ_G0020989.1 mouse_genomes_project 14 120150037 120152963 + Pcca protein_coding retained_intron MGP_WSBEiJ_T0038870.1 MGP_WSBEiJ_G0020743.1 mouse_genomes_project 14 54906816 54909577 + MGP_WSBEiJ_P0038870 Amer2 protein_coding protein_coding MGP_WSBEiJ_T0038247.1 MGP_WSBEiJ_G0020546.1 mouse_genomes_project 14 42869975 42891184 + MGP_WSBEiJ_P0038247 Ap5m1 protein_coding protein_coding MGP_WSBEiJ_T0009828.1 MGP_WSBEiJ_G0007985.1 mouse_genomes_project 14 39273968 39274061 - Mir5131 miRNA miRNA MGP_WSBEiJ_T0000892.1 MGP_WSBEiJ_G0000830.1 mouse_genomes_project 14 64196602 64198099 + TEC TEC MGP_WSBEiJ_T0039156.1 MGP_WSBEiJ_G0020859.1 mouse_genomes_project 14 65396283 65402347 - MGP_WSBEiJ_P0039156 Fgf17 protein_coding protein_coding MGP_WSBEiJ_T0039477.1 MGP_WSBEiJ_G0020971.1 mouse_genomes_project 14 117125182 117149973 - MGP_WSBEiJ_P0039477 Oxgr1 protein_coding protein_coding MGP_WSBEiJ_T0038775.1 MGP_WSBEiJ_G0020711.1 mouse_genomes_project 14 51084029 51143043 - MGP_WSBEiJ_P0038775 Pspc1 protein_coding protein_coding MGP_WSBEiJ_T0038776.1 MGP_WSBEiJ_G0020711.1 mouse_genomes_project 14 51085574 51143043 - MGP_WSBEiJ_P0038776 Pspc1 protein_coding protein_coding MGP_WSBEiJ_T0038777.1 MGP_WSBEiJ_G0020711.1 mouse_genomes_project 14 51110888 51123983 - Pspc1 protein_coding retained_intron MGP_WSBEiJ_T0038778.1 MGP_WSBEiJ_G0020711.1 mouse_genomes_project 14 51111212 51142654 - MGP_WSBEiJ_P0038778 Pspc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006612.1 MGP_WSBEiJ_G0005466.1 mouse_genomes_project 14 57397515 57468269 + 4931440J10Rik lincRNA lincRNA MGP_WSBEiJ_T0100018.1 MGP_WSBEiJ_G0038654.1 mouse_genomes_project 14 53342547 53343029 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100019.1 MGP_WSBEiJ_G0038654.1 mouse_genomes_project 14 53342950 53343942 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099117.1 MGP_WSBEiJ_G0037780.1 mouse_genomes_project 14 92515064 92515194 + Gm25133 snoRNA snoRNA MGP_WSBEiJ_T0038077.1 MGP_WSBEiJ_G0020497.1 mouse_genomes_project 14 29529254 29534727 + MGP_WSBEiJ_P0038077 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039412.1 MGP_WSBEiJ_G0020944.1 mouse_genomes_project 14 99932690 99991734 + MGP_WSBEiJ_P0039412 Slain1 protein_coding protein_coding MGP_WSBEiJ_T0039413.1 MGP_WSBEiJ_G0020944.1 mouse_genomes_project 14 99933108 99991137 + MGP_WSBEiJ_P0039413 Slain1 protein_coding protein_coding MGP_WSBEiJ_T0039414.1 MGP_WSBEiJ_G0020944.1 mouse_genomes_project 14 99938287 99974481 + MGP_WSBEiJ_P0039414 Slain1 protein_coding protein_coding MGP_WSBEiJ_T0039415.1 MGP_WSBEiJ_G0020944.1 mouse_genomes_project 14 99948202 99991629 + MGP_WSBEiJ_P0039415 Slain1 protein_coding protein_coding MGP_WSBEiJ_T0009817.1 MGP_WSBEiJ_G0007974.1 mouse_genomes_project 14 13445462 13445531 + Mir6946 miRNA miRNA MGP_WSBEiJ_T0100571.1 MGP_WSBEiJ_G0039029.1 mouse_genomes_project 14 37362754 37363189 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012734.1 MGP_WSBEiJ_G0010864.1 mouse_genomes_project 14 69620496 69636026 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002478.1 MGP_WSBEiJ_G0002388.1 mouse_genomes_project 14 48380926 48380989 + MGP_WSBEiJ_P0002478 Traj39 TR_J_gene TR_J_gene MGP_WSBEiJ_T0037509.1 MGP_WSBEiJ_G0020339.1 mouse_genomes_project 14 12101639 12102649 - MGP_WSBEiJ_P0037509 protein_coding protein_coding MGP_WSBEiJ_T0037685.1 MGP_WSBEiJ_G0020388.1 mouse_genomes_project 14 18836501 18840168 - MGP_WSBEiJ_P0037685 Tmem254b protein_coding protein_coding MGP_WSBEiJ_T0037688.1 MGP_WSBEiJ_G0020388.1 mouse_genomes_project 14 18836671 18839746 - MGP_WSBEiJ_P0037688 Tmem254b protein_coding protein_coding MGP_WSBEiJ_T0037689.1 MGP_WSBEiJ_G0020388.1 mouse_genomes_project 14 18837251 18840139 - MGP_WSBEiJ_P0037689 Tmem254b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037690.1 MGP_WSBEiJ_G0020388.1 mouse_genomes_project 14 18837258 18838290 - Tmem254b protein_coding retained_intron MGP_WSBEiJ_T0038782.1 MGP_WSBEiJ_G0020714.1 mouse_genomes_project 14 51419002 51443011 - MGP_WSBEiJ_P0038782 Gja3 protein_coding protein_coding MGP_WSBEiJ_T0038895.1 MGP_WSBEiJ_G0020752.1 mouse_genomes_project 14 55942012 56022993 - MGP_WSBEiJ_P0038895 Kpna3 protein_coding protein_coding MGP_WSBEiJ_T0038847.1 MGP_WSBEiJ_G0020735.1 mouse_genomes_project 14 53897689 53938736 - MGP_WSBEiJ_P0038847 protein_coding protein_coding MGP_WSBEiJ_T0038848.1 MGP_WSBEiJ_G0020735.1 mouse_genomes_project 14 53897691 53938729 - MGP_WSBEiJ_P0038848 protein_coding protein_coding MGP_WSBEiJ_T0038849.1 MGP_WSBEiJ_G0020735.1 mouse_genomes_project 14 53897944 53905982 - protein_coding retained_intron MGP_WSBEiJ_T0038850.1 MGP_WSBEiJ_G0020735.1 mouse_genomes_project 14 53919670 53938727 - MGP_WSBEiJ_P0038850 protein_coding protein_coding MGP_WSBEiJ_T0038851.1 MGP_WSBEiJ_G0020735.1 mouse_genomes_project 14 53927724 53938725 - protein_coding processed_transcript MGP_WSBEiJ_T0037622.1 MGP_WSBEiJ_G0020374.1 mouse_genomes_project 14 14796664 14802288 - MGP_WSBEiJ_P0037622 Zfp503 protein_coding protein_coding MGP_WSBEiJ_T0038273.1 MGP_WSBEiJ_G0020559.1 mouse_genomes_project 14 44084524 44085505 - MGP_WSBEiJ_P0038273 Olfr731 protein_coding protein_coding MGP_WSBEiJ_T0002490.1 MGP_WSBEiJ_G0002400.1 mouse_genomes_project 14 48396078 48396138 + MGP_WSBEiJ_P0002490 Traj26 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038720.1 MGP_WSBEiJ_G0020677.1 mouse_genomes_project 14 49942046 49948582 + MGP_WSBEiJ_P0038720 Gmpr2 protein_coding protein_coding MGP_WSBEiJ_T0038928.1 MGP_WSBEiJ_G0020768.1 mouse_genomes_project 14 57794104 57817535 + MGP_WSBEiJ_P0038928 Ctsb protein_coding protein_coding MGP_WSBEiJ_T0000877.1 MGP_WSBEiJ_G0000815.1 mouse_genomes_project 14 39665556 39681933 - TEC TEC MGP_WSBEiJ_T0009866.1 MGP_WSBEiJ_G0008023.1 mouse_genomes_project 14 111952661 111952741 + Mir92-1 miRNA miRNA MGP_WSBEiJ_T0012685.1 MGP_WSBEiJ_G0010815.1 mouse_genomes_project 14 3537974 3538800 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002491.1 MGP_WSBEiJ_G0002401.1 mouse_genomes_project 14 48397603 48397660 + MGP_WSBEiJ_P0002491 Traj25 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038936.1 MGP_WSBEiJ_G0020772.1 mouse_genomes_project 14 58060737 58114609 - MGP_WSBEiJ_P0038936 Blk protein_coding protein_coding MGP_WSBEiJ_T0012739.1 MGP_WSBEiJ_G0010869.1 mouse_genomes_project 14 91294934 91296415 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039283.1 MGP_WSBEiJ_G0020895.1 mouse_genomes_project 14 72051192 72112510 + MGP_WSBEiJ_P0039283 Ccdc122 protein_coding protein_coding MGP_WSBEiJ_T0039284.1 MGP_WSBEiJ_G0020895.1 mouse_genomes_project 14 72051202 72112510 + MGP_WSBEiJ_P0039284 Ccdc122 protein_coding protein_coding MGP_WSBEiJ_T0039285.1 MGP_WSBEiJ_G0020895.1 mouse_genomes_project 14 72051284 72112001 + MGP_WSBEiJ_P0039285 Ccdc122 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039286.1 MGP_WSBEiJ_G0020895.1 mouse_genomes_project 14 72111280 72112563 + Ccdc122 protein_coding processed_transcript MGP_WSBEiJ_T0038901.1 MGP_WSBEiJ_G0020757.1 mouse_genomes_project 14 56906285 56969170 + MGP_WSBEiJ_P0038901 Rnaseh2b protein_coding protein_coding MGP_WSBEiJ_T0038902.1 MGP_WSBEiJ_G0020757.1 mouse_genomes_project 14 56945851 56989282 + MGP_WSBEiJ_P0038902 Rnaseh2b protein_coding protein_coding MGP_WSBEiJ_T0038903.1 MGP_WSBEiJ_G0020757.1 mouse_genomes_project 14 56945908 56980505 + MGP_WSBEiJ_P0038903 Rnaseh2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038904.1 MGP_WSBEiJ_G0020757.1 mouse_genomes_project 14 56962122 56970939 + Rnaseh2b protein_coding retained_intron MGP_WSBEiJ_T0099102.1 MGP_WSBEiJ_G0037765.1 mouse_genomes_project 14 59483178 59483314 + Gm26225 snoRNA snoRNA MGP_WSBEiJ_T0012736.1 MGP_WSBEiJ_G0010866.1 mouse_genomes_project 14 69620497 69636030 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037669.1 MGP_WSBEiJ_G0020382.1 mouse_genomes_project 14 18599146 18605548 + Ppif protein_coding retained_intron MGP_WSBEiJ_T0037670.1 MGP_WSBEiJ_G0020382.1 mouse_genomes_project 14 18599162 18605552 + MGP_WSBEiJ_P0037670 Ppif protein_coding protein_coding MGP_WSBEiJ_T0039153.1 MGP_WSBEiJ_G0020858.1 mouse_genomes_project 14 65361363 65390325 - MGP_WSBEiJ_P0039153 Dmtn protein_coding protein_coding MGP_WSBEiJ_T0039154.1 MGP_WSBEiJ_G0020858.1 mouse_genomes_project 14 65361364 65387236 - MGP_WSBEiJ_P0039154 Dmtn protein_coding protein_coding MGP_WSBEiJ_T0039155.1 MGP_WSBEiJ_G0020858.1 mouse_genomes_project 14 65361364 65396128 - MGP_WSBEiJ_P0039155 Dmtn protein_coding protein_coding MGP_WSBEiJ_T0037578.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14265091 14308523 + MGP_WSBEiJ_P0037578 Kat6b protein_coding protein_coding MGP_WSBEiJ_T0037579.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14265116 14412426 + Kat6b protein_coding processed_transcript MGP_WSBEiJ_T0037580.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14288370 14462749 + MGP_WSBEiJ_P0037580 Kat6b protein_coding protein_coding MGP_WSBEiJ_T0037581.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14288385 14463156 + MGP_WSBEiJ_P0037581 Kat6b protein_coding protein_coding MGP_WSBEiJ_T0037582.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14288454 14310055 + Kat6b protein_coding retained_intron MGP_WSBEiJ_T0037583.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14288459 14463065 + MGP_WSBEiJ_P0037583 Kat6b protein_coding unknown_likely_coding MGP_WSBEiJ_T0037584.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14288468 14462811 + MGP_WSBEiJ_P0037584 Kat6b protein_coding protein_coding MGP_WSBEiJ_T0037585.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14289453 14411840 + Kat6b protein_coding retained_intron MGP_WSBEiJ_T0037586.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14289485 14311716 + Kat6b protein_coding retained_intron MGP_WSBEiJ_T0037587.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14289489 14411045 + Kat6b protein_coding retained_intron MGP_WSBEiJ_T0037588.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14289492 14463156 + MGP_WSBEiJ_P0037588 Kat6b protein_coding protein_coding MGP_WSBEiJ_T0037589.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14308162 14461884 + MGP_WSBEiJ_P0037589 Kat6b protein_coding protein_coding MGP_WSBEiJ_T0037590.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14412409 14415941 + Kat6b protein_coding retained_intron MGP_WSBEiJ_T0037591.1 MGP_WSBEiJ_G0020368.1 mouse_genomes_project 14 14412936 14424920 + Kat6b protein_coding retained_intron MGP_WSBEiJ_T0012711.1 MGP_WSBEiJ_G0010841.1 mouse_genomes_project 14 39528793 39529172 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038868.1 MGP_WSBEiJ_G0020742.1 mouse_genomes_project 14 54783011 54823445 + MGP_WSBEiJ_P0038868 Mtmr6 protein_coding protein_coding MGP_WSBEiJ_T0038869.1 MGP_WSBEiJ_G0020742.1 mouse_genomes_project 14 54785445 54823455 + MGP_WSBEiJ_P0038869 Mtmr6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038274.1 MGP_WSBEiJ_G0020560.1 mouse_genomes_project 14 44124392 44125436 - MGP_WSBEiJ_P0038274 Olfr732 protein_coding protein_coding MGP_WSBEiJ_T0037997.1 MGP_WSBEiJ_G0020464.1 mouse_genomes_project 14 25936780 25964793 - MGP_WSBEiJ_P0037997 3425401B19Rik protein_coding protein_coding MGP_WSBEiJ_T0006622.1 MGP_WSBEiJ_G0005472.1 mouse_genomes_project 14 65616435 65639960 + 2410012E07Rik lincRNA lincRNA MGP_WSBEiJ_T0012749.1 MGP_WSBEiJ_G0010879.1 mouse_genomes_project 14 109327225 109327705 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002471.1 MGP_WSBEiJ_G0002381.1 mouse_genomes_project 14 48373371 48373434 + MGP_WSBEiJ_P0002471 Traj46 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002591.1 MGP_WSBEiJ_G0002487.1 mouse_genomes_project 14 47351159 47351731 + MGP_WSBEiJ_P0002591 TR_V_gene TR_V_gene MGP_WSBEiJ_T0099131.1 MGP_WSBEiJ_G0037794.1 mouse_genomes_project 14 115344354 115344482 + Gm23669 snoRNA snoRNA MGP_WSBEiJ_T0038864.1 MGP_WSBEiJ_G0020740.1 mouse_genomes_project 14 54599745 54609548 + MGP_WSBEiJ_P0038864 4930563I02Rik protein_coding protein_coding MGP_WSBEiJ_T0038865.1 MGP_WSBEiJ_G0020740.1 mouse_genomes_project 14 54600191 54609558 + MGP_WSBEiJ_P0038865 4930563I02Rik protein_coding protein_coding MGP_WSBEiJ_T0037409.1 MGP_WSBEiJ_G0020308.1 mouse_genomes_project 14 679326 711256 - MGP_WSBEiJ_P0037409 Oit1 protein_coding protein_coding MGP_WSBEiJ_T0038304.1 MGP_WSBEiJ_G0020579.1 mouse_genomes_project 14 44860780 44864490 + MGP_WSBEiJ_P0038304 Apex1 protein_coding protein_coding MGP_WSBEiJ_T0038305.1 MGP_WSBEiJ_G0020579.1 mouse_genomes_project 14 44860781 44863902 + MGP_WSBEiJ_P0038305 Apex1 protein_coding protein_coding MGP_WSBEiJ_T0038306.1 MGP_WSBEiJ_G0020579.1 mouse_genomes_project 14 44860782 44864490 + MGP_WSBEiJ_P0038306 Apex1 protein_coding protein_coding MGP_WSBEiJ_T0038307.1 MGP_WSBEiJ_G0020579.1 mouse_genomes_project 14 44860790 44861446 + MGP_WSBEiJ_P0038307 Apex1 protein_coding protein_coding MGP_WSBEiJ_T0038997.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60738246 60753374 + MGP_WSBEiJ_P0038997 Clu protein_coding protein_coding MGP_WSBEiJ_T0038998.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60738405 60745384 + MGP_WSBEiJ_P0038998 Clu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038999.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60738417 60742283 + Clu protein_coding retained_intron MGP_WSBEiJ_T0039000.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60739481 60745699 + MGP_WSBEiJ_P0039000 Clu protein_coding protein_coding MGP_WSBEiJ_T0039001.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60740383 60745603 + MGP_WSBEiJ_P0039001 Clu protein_coding protein_coding MGP_WSBEiJ_T0039002.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60740549 60745580 + MGP_WSBEiJ_P0039002 Clu protein_coding protein_coding MGP_WSBEiJ_T0039003.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60740803 60745515 + MGP_WSBEiJ_P0039003 Clu protein_coding protein_coding MGP_WSBEiJ_T0039004.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60741048 60744700 + MGP_WSBEiJ_P0039004 Clu protein_coding protein_coding MGP_WSBEiJ_T0039005.1 MGP_WSBEiJ_G0020800.1 mouse_genomes_project 14 60744406 60745712 + Clu protein_coding retained_intron MGP_WSBEiJ_T0006583.1 MGP_WSBEiJ_G0005445.1 mouse_genomes_project 14 40080806 40098862 + Gm15221 lincRNA lincRNA MGP_WSBEiJ_T0039143.1 MGP_WSBEiJ_G0020851.1 mouse_genomes_project 14 65226747 65276567 - MGP_WSBEiJ_P0039143 Bmp1 protein_coding protein_coding MGP_WSBEiJ_T0002554.1 MGP_WSBEiJ_G0002457.1 mouse_genomes_project 14 46813122 46813576 + MGP_WSBEiJ_P0002554 Trav6-2 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002555.1 MGP_WSBEiJ_G0002457.1 mouse_genomes_project 14 46813122 46813576 + MGP_WSBEiJ_P0002555 Trav6-2 TR_V_gene TR_V_gene MGP_WSBEiJ_T0009839.1 MGP_WSBEiJ_G0007996.1 mouse_genomes_project 14 56218844 56218928 - Mir15a miRNA miRNA MGP_WSBEiJ_T0099113.1 MGP_WSBEiJ_G0037776.1 mouse_genomes_project 14 86038729 86038860 + Gm25495 snoRNA snoRNA MGP_WSBEiJ_T0003468.1 MGP_WSBEiJ_G0003157.1 mouse_genomes_project 14 32741918 32773603 + Gm20642 antisense antisense MGP_WSBEiJ_T0097843.1 MGP_WSBEiJ_G0036506.1 mouse_genomes_project 14 42803940 42804060 - Gm23470 snRNA snRNA MGP_WSBEiJ_T0037388.1 MGP_WSBEiJ_G0020301.1 mouse_genomes_project 14 317775 372416 + MGP_WSBEiJ_P0037388 Abhd6 protein_coding protein_coding MGP_WSBEiJ_T0037389.1 MGP_WSBEiJ_G0020301.1 mouse_genomes_project 14 317839 371722 + MGP_WSBEiJ_P0037389 Abhd6 protein_coding protein_coding MGP_WSBEiJ_T0038616.1 MGP_WSBEiJ_G0020660.1 mouse_genomes_project 14 49767382 49774363 + MGP_WSBEiJ_P0038616 Cpne6 protein_coding protein_coding MGP_WSBEiJ_T0038617.1 MGP_WSBEiJ_G0020660.1 mouse_genomes_project 14 49767385 49774363 + MGP_WSBEiJ_P0038617 Cpne6 protein_coding protein_coding MGP_WSBEiJ_T0038618.1 MGP_WSBEiJ_G0020660.1 mouse_genomes_project 14 49767412 49774362 + Cpne6 protein_coding retained_intron MGP_WSBEiJ_T0038619.1 MGP_WSBEiJ_G0020660.1 mouse_genomes_project 14 49767534 49770628 + MGP_WSBEiJ_P0038619 Cpne6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038620.1 MGP_WSBEiJ_G0020660.1 mouse_genomes_project 14 49768248 49774363 + Cpne6 protein_coding retained_intron MGP_WSBEiJ_T0038621.1 MGP_WSBEiJ_G0020660.1 mouse_genomes_project 14 49768297 49774363 + MGP_WSBEiJ_P0038621 Cpne6 protein_coding protein_coding MGP_WSBEiJ_T0038622.1 MGP_WSBEiJ_G0020660.1 mouse_genomes_project 14 49768920 49774361 + MGP_WSBEiJ_P0038622 Cpne6 protein_coding protein_coding MGP_WSBEiJ_T0012689.1 MGP_WSBEiJ_G0010819.1 mouse_genomes_project 14 11078442 11079442 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038135.1 MGP_WSBEiJ_G0020521.1 mouse_genomes_project 14 38926657 38946400 + MGP_WSBEiJ_P0038135 Psmc6 protein_coding protein_coding MGP_WSBEiJ_T0039489.1 MGP_WSBEiJ_G0020977.1 mouse_genomes_project 14 118638050 118694462 - MGP_WSBEiJ_P0039489 Slc15a1 protein_coding protein_coding MGP_WSBEiJ_T0038884.1 MGP_WSBEiJ_G0020748.1 mouse_genomes_project 14 55699614 55810694 + MGP_WSBEiJ_P0038884 protein_coding protein_coding MGP_WSBEiJ_T0038885.1 MGP_WSBEiJ_G0020748.1 mouse_genomes_project 14 55699648 55769714 + MGP_WSBEiJ_P0038885 protein_coding protein_coding MGP_WSBEiJ_T0038886.1 MGP_WSBEiJ_G0020748.1 mouse_genomes_project 14 55710439 55785546 + MGP_WSBEiJ_P0038886 protein_coding protein_coding MGP_WSBEiJ_T0038887.1 MGP_WSBEiJ_G0020748.1 mouse_genomes_project 14 55743210 55765701 + MGP_WSBEiJ_P0038887 protein_coding protein_coding MGP_WSBEiJ_T0038888.1 MGP_WSBEiJ_G0020748.1 mouse_genomes_project 14 55743425 55785551 + MGP_WSBEiJ_P0038888 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038889.1 MGP_WSBEiJ_G0020748.1 mouse_genomes_project 14 55758868 55774969 + protein_coding retained_intron MGP_WSBEiJ_T0099130.1 MGP_WSBEiJ_G0037793.1 mouse_genomes_project 14 106441448 106441578 - Gm25901 snoRNA snoRNA MGP_WSBEiJ_T0037784.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23760427 23794436 - MGP_WSBEiJ_P0037784 Prkcd protein_coding protein_coding MGP_WSBEiJ_T0037785.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23760435 23794391 - MGP_WSBEiJ_P0037785 Prkcd protein_coding protein_coding MGP_WSBEiJ_T0037786.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23760437 23778333 - MGP_WSBEiJ_P0037786 Prkcd protein_coding protein_coding MGP_WSBEiJ_T0037787.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23760672 23775853 - MGP_WSBEiJ_P0037787 Prkcd protein_coding protein_coding MGP_WSBEiJ_T0037788.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23760731 23765289 - Prkcd protein_coding retained_intron MGP_WSBEiJ_T0037789.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23763489 23775853 - MGP_WSBEiJ_P0037789 Prkcd protein_coding protein_coding MGP_WSBEiJ_T0037790.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23763489 23775853 - MGP_WSBEiJ_P0037790 Prkcd protein_coding protein_coding MGP_WSBEiJ_T0037791.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23767095 23794355 - Prkcd protein_coding retained_intron MGP_WSBEiJ_T0037792.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23769238 23774049 - Prkcd protein_coding retained_intron MGP_WSBEiJ_T0037793.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23769335 23773858 - Prkcd protein_coding retained_intron MGP_WSBEiJ_T0037794.1 MGP_WSBEiJ_G0020420.1 mouse_genomes_project 14 23772383 23775374 - Prkcd protein_coding retained_intron MGP_WSBEiJ_T0037748.1 MGP_WSBEiJ_G0020404.1 mouse_genomes_project 14 20056105 20058101 + MGP_WSBEiJ_P0037748 Hesx1 protein_coding protein_coding MGP_WSBEiJ_T0037522.1 MGP_WSBEiJ_G0020347.1 mouse_genomes_project 14 13061911 13093496 - MGP_WSBEiJ_P0037522 Ecd protein_coding protein_coding MGP_WSBEiJ_T0002484.1 MGP_WSBEiJ_G0002394.1 mouse_genomes_project 14 48387036 48387102 + MGP_WSBEiJ_P0002484 Traj32 TR_J_gene TR_J_gene MGP_WSBEiJ_T0097829.1 MGP_WSBEiJ_G0036492.1 mouse_genomes_project 14 6320274 6320371 + Gm25964 snRNA snRNA MGP_WSBEiJ_T0038783.1 MGP_WSBEiJ_G0020715.1 mouse_genomes_project 14 51486414 51492424 - MGP_WSBEiJ_P0038783 Gjb2 protein_coding protein_coding MGP_WSBEiJ_T0012747.1 MGP_WSBEiJ_G0010877.1 mouse_genomes_project 14 101599498 101600055 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039157.1 MGP_WSBEiJ_G0020860.1 mouse_genomes_project 14 65407380 65413168 - MGP_WSBEiJ_P0039157 Npm2 protein_coding protein_coding MGP_WSBEiJ_T0038474.1 MGP_WSBEiJ_G0020619.1 mouse_genomes_project 14 48459745 48474577 + MGP_WSBEiJ_P0038474 Abhd4 protein_coding protein_coding MGP_WSBEiJ_T0038475.1 MGP_WSBEiJ_G0020619.1 mouse_genomes_project 14 48464816 48474671 + MGP_WSBEiJ_P0038475 Abhd4 protein_coding protein_coding MGP_WSBEiJ_T0038476.1 MGP_WSBEiJ_G0020619.1 mouse_genomes_project 14 48464831 48468719 + Abhd4 protein_coding retained_intron MGP_WSBEiJ_T0038477.1 MGP_WSBEiJ_G0020619.1 mouse_genomes_project 14 48464837 48468878 + MGP_WSBEiJ_P0038477 Abhd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038478.1 MGP_WSBEiJ_G0020619.1 mouse_genomes_project 14 48464865 48468881 + MGP_WSBEiJ_P0038478 Abhd4 protein_coding protein_coding MGP_WSBEiJ_T0038479.1 MGP_WSBEiJ_G0020619.1 mouse_genomes_project 14 48468533 48475914 + MGP_WSBEiJ_P0038479 Abhd4 protein_coding protein_coding MGP_WSBEiJ_T0038480.1 MGP_WSBEiJ_G0020619.1 mouse_genomes_project 14 48468838 48473356 + MGP_WSBEiJ_P0038480 Abhd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099085.1 MGP_WSBEiJ_G0037748.1 mouse_genomes_project 14 25437968 25438165 - Gm23946 snoRNA snoRNA MGP_WSBEiJ_T0039030.1 MGP_WSBEiJ_G0020808.1 mouse_genomes_project 14 61436181 61545267 + MGP_WSBEiJ_P0039030 Adra1a protein_coding protein_coding MGP_WSBEiJ_T0039031.1 MGP_WSBEiJ_G0020808.1 mouse_genomes_project 14 61436188 61545131 + MGP_WSBEiJ_P0039031 Adra1a protein_coding protein_coding MGP_WSBEiJ_T0039032.1 MGP_WSBEiJ_G0020808.1 mouse_genomes_project 14 61436239 61441258 + Adra1a protein_coding retained_intron MGP_WSBEiJ_T0039033.1 MGP_WSBEiJ_G0020808.1 mouse_genomes_project 14 61436271 61541787 + MGP_WSBEiJ_P0039033 Adra1a protein_coding protein_coding MGP_WSBEiJ_T0039034.1 MGP_WSBEiJ_G0020808.1 mouse_genomes_project 14 61436486 61544543 + MGP_WSBEiJ_P0039034 Adra1a protein_coding protein_coding MGP_WSBEiJ_T0003469.1 MGP_WSBEiJ_G0003158.1 mouse_genomes_project 14 39202898 39213691 + Gm15601 antisense antisense MGP_WSBEiJ_T0039114.1 MGP_WSBEiJ_G0020844.1 mouse_genomes_project 14 64895704 64909591 - MGP_WSBEiJ_P0039114 Pdlim2 protein_coding protein_coding MGP_WSBEiJ_T0039115.1 MGP_WSBEiJ_G0020844.1 mouse_genomes_project 14 64897421 64900871 - MGP_WSBEiJ_P0039115 Pdlim2 protein_coding protein_coding MGP_WSBEiJ_T0039116.1 MGP_WSBEiJ_G0020844.1 mouse_genomes_project 14 64897657 64901005 - MGP_WSBEiJ_P0039116 Pdlim2 protein_coding protein_coding MGP_WSBEiJ_T0039117.1 MGP_WSBEiJ_G0020844.1 mouse_genomes_project 14 64900795 64908276 - MGP_WSBEiJ_P0039117 Pdlim2 protein_coding protein_coding MGP_WSBEiJ_T0039118.1 MGP_WSBEiJ_G0020844.1 mouse_genomes_project 14 64900821 64909662 - Pdlim2 protein_coding retained_intron MGP_WSBEiJ_T0039119.1 MGP_WSBEiJ_G0020844.1 mouse_genomes_project 14 64902458 64908269 - Pdlim2 protein_coding retained_intron MGP_WSBEiJ_T0039120.1 MGP_WSBEiJ_G0020844.1 mouse_genomes_project 14 64904477 64908263 - Pdlim2 protein_coding retained_intron MGP_WSBEiJ_T0039121.1 MGP_WSBEiJ_G0020844.1 mouse_genomes_project 14 64904555 64905030 - Pdlim2 protein_coding retained_intron MGP_WSBEiJ_T0002494.1 MGP_WSBEiJ_G0002404.1 mouse_genomes_project 14 48400040 48400100 + MGP_WSBEiJ_P0002494 Traj22 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038282.1 MGP_WSBEiJ_G0020565.1 mouse_genomes_project 14 44246697 44247636 + MGP_WSBEiJ_P0038282 Olfr736 protein_coding protein_coding MGP_WSBEiJ_T0039139.1 MGP_WSBEiJ_G0020849.1 mouse_genomes_project 14 65187679 65192401 - MGP_WSBEiJ_P0039139 Polr3d protein_coding protein_coding MGP_WSBEiJ_T0039140.1 MGP_WSBEiJ_G0020849.1 mouse_genomes_project 14 65187679 65192157 - MGP_WSBEiJ_P0039140 Polr3d protein_coding protein_coding MGP_WSBEiJ_T0038332.1 MGP_WSBEiJ_G0020592.1 mouse_genomes_project 14 45167986 45168424 - MGP_WSBEiJ_P0038332 Ang2 protein_coding protein_coding MGP_WSBEiJ_T0012723.1 MGP_WSBEiJ_G0010853.1 mouse_genomes_project 14 51842764 51843557 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006604.1 MGP_WSBEiJ_G0005459.1 mouse_genomes_project 14 51985812 51986558 + 1700039M10Rik lincRNA lincRNA MGP_WSBEiJ_T0037993.1 MGP_WSBEiJ_G0020463.1 mouse_genomes_project 14 25874834 25926411 + MGP_WSBEiJ_P0037993 Prrxl1 protein_coding protein_coding MGP_WSBEiJ_T0037994.1 MGP_WSBEiJ_G0020463.1 mouse_genomes_project 14 25874835 25906725 + MGP_WSBEiJ_P0037994 Prrxl1 protein_coding protein_coding MGP_WSBEiJ_T0037995.1 MGP_WSBEiJ_G0020463.1 mouse_genomes_project 14 25874968 25906700 + MGP_WSBEiJ_P0037995 Prrxl1 protein_coding protein_coding MGP_WSBEiJ_T0037996.1 MGP_WSBEiJ_G0020463.1 mouse_genomes_project 14 25875294 25926453 + MGP_WSBEiJ_P0037996 Prrxl1 protein_coding protein_coding MGP_WSBEiJ_T0000888.1 MGP_WSBEiJ_G0000826.1 mouse_genomes_project 14 59569494 59572889 - TEC TEC MGP_WSBEiJ_T0012683.1 MGP_WSBEiJ_G0010813.1 mouse_genomes_project 14 2223763 2224364 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039481.1 MGP_WSBEiJ_G0020973.1 mouse_genomes_project 14 117615801 117646729 + MGP_WSBEiJ_P0039481 Rap2a protein_coding protein_coding MGP_WSBEiJ_T0039482.1 MGP_WSBEiJ_G0020973.1 mouse_genomes_project 14 117643135 117646729 + MGP_WSBEiJ_P0039482 Rap2a protein_coding protein_coding MGP_WSBEiJ_T0003512.1 MGP_WSBEiJ_G0003190.1 mouse_genomes_project 14 119090756 119092296 - 1810041H14Rik antisense antisense MGP_WSBEiJ_T0003513.1 MGP_WSBEiJ_G0003190.1 mouse_genomes_project 14 119090842 119092530 - 1810041H14Rik antisense antisense MGP_WSBEiJ_T0003514.1 MGP_WSBEiJ_G0003190.1 mouse_genomes_project 14 119090890 119093435 - 1810041H14Rik antisense antisense MGP_WSBEiJ_T0000878.1 MGP_WSBEiJ_G0000816.1 mouse_genomes_project 14 41467291 41469851 + TEC TEC MGP_WSBEiJ_T0009852.1 MGP_WSBEiJ_G0008009.1 mouse_genomes_project 14 70170718 70170821 + Gm44482 miRNA miRNA MGP_WSBEiJ_T0002527.1 MGP_WSBEiJ_G0002435.1 mouse_genomes_project 14 48356174 48356246 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0039440.1 MGP_WSBEiJ_G0020957.1 mouse_genomes_project 14 110183319 110185335 + MGP_WSBEiJ_P0039440 protein_coding protein_coding MGP_WSBEiJ_T0038522.1 MGP_WSBEiJ_G0020634.1 mouse_genomes_project 14 48843296 48843747 + MGP_WSBEiJ_P0038522 Gm20726 protein_coding protein_coding MGP_WSBEiJ_T0038614.1 MGP_WSBEiJ_G0020659.1 mouse_genomes_project 14 49748071 49765181 + MGP_WSBEiJ_P0038614 Lrrc16b protein_coding protein_coding MGP_WSBEiJ_T0038615.1 MGP_WSBEiJ_G0020659.1 mouse_genomes_project 14 49748222 49765543 + MGP_WSBEiJ_P0038615 Lrrc16b protein_coding unknown_likely_coding MGP_WSBEiJ_T0016781.1 MGP_WSBEiJ_G0014684.1 mouse_genomes_project 14 12215147 12221511 + processed_transcript processed_transcript MGP_WSBEiJ_T0016782.1 MGP_WSBEiJ_G0014684.1 mouse_genomes_project 14 12215254 12222410 + processed_transcript processed_transcript MGP_WSBEiJ_T0012687.1 MGP_WSBEiJ_G0010817.1 mouse_genomes_project 14 5798054 5798186 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012728.1 MGP_WSBEiJ_G0010858.1 mouse_genomes_project 14 58126485 58127483 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038324.1 MGP_WSBEiJ_G0020586.1 mouse_genomes_project 14 45006996 45008128 - MGP_WSBEiJ_P0038324 Olfr750 protein_coding protein_coding MGP_WSBEiJ_T0002567.1 MGP_WSBEiJ_G0002466.1 mouse_genomes_project 14 46899433 46899919 + MGP_WSBEiJ_P0002567 TR_V_gene TR_V_gene MGP_WSBEiJ_T0038626.1 MGP_WSBEiJ_G0020662.1 mouse_genomes_project 14 49800898 49812364 + MGP_WSBEiJ_P0038626 Pck2 protein_coding protein_coding MGP_WSBEiJ_T0000884.1 MGP_WSBEiJ_G0000822.1 mouse_genomes_project 14 49337477 49338516 - TEC TEC MGP_WSBEiJ_T0039476.1 MGP_WSBEiJ_G0020970.1 mouse_genomes_project 14 116218774 116973132 + MGP_WSBEiJ_P0039476 Hs6st3 protein_coding protein_coding MGP_WSBEiJ_T0100576.1 MGP_WSBEiJ_G0039034.1 mouse_genomes_project 14 121825362 121825647 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0038517.1 MGP_WSBEiJ_G0020629.1 mouse_genomes_project 14 48778381 48788468 - MGP_WSBEiJ_P0038517 Ajuba protein_coding protein_coding MGP_WSBEiJ_T0037691.1 MGP_WSBEiJ_G0020390.1 mouse_genomes_project 14 18850791 18868585 + protein_coding processed_transcript MGP_WSBEiJ_T0037695.1 MGP_WSBEiJ_G0020390.1 mouse_genomes_project 14 18856175 18869991 + MGP_WSBEiJ_P0037695 protein_coding protein_coding MGP_WSBEiJ_T0037697.1 MGP_WSBEiJ_G0020390.1 mouse_genomes_project 14 18865442 18868866 + protein_coding retained_intron MGP_WSBEiJ_T0037698.1 MGP_WSBEiJ_G0020390.1 mouse_genomes_project 14 18868302 18868782 + protein_coding retained_intron MGP_WSBEiJ_T0003456.1 MGP_WSBEiJ_G0003146.1 mouse_genomes_project 14 16425110 16429510 + Gm29626 antisense antisense MGP_WSBEiJ_T0003457.1 MGP_WSBEiJ_G0003146.1 mouse_genomes_project 14 16425127 16429508 + Gm29626 antisense antisense MGP_WSBEiJ_T0038138.1 MGP_WSBEiJ_G0020524.1 mouse_genomes_project 14 39065098 39141868 - MGP_WSBEiJ_P0038138 Fermt2 protein_coding protein_coding MGP_WSBEiJ_T0038139.1 MGP_WSBEiJ_G0020524.1 mouse_genomes_project 14 39076486 39085061 - MGP_WSBEiJ_P0038139 Fermt2 protein_coding protein_coding MGP_WSBEiJ_T0038140.1 MGP_WSBEiJ_G0020524.1 mouse_genomes_project 14 39083069 39140820 - MGP_WSBEiJ_P0038140 Fermt2 protein_coding protein_coding MGP_WSBEiJ_T0038141.1 MGP_WSBEiJ_G0020524.1 mouse_genomes_project 14 39114073 39140642 - Fermt2 protein_coding processed_transcript MGP_WSBEiJ_T0038276.1 MGP_WSBEiJ_G0020562.1 mouse_genomes_project 14 44162268 44163301 - MGP_WSBEiJ_P0038276 Olfr734 protein_coding protein_coding MGP_WSBEiJ_T0003486.1 MGP_WSBEiJ_G0003171.1 mouse_genomes_project 14 51188213 51191720 + 2410022M11Rik antisense antisense MGP_WSBEiJ_T0038573.1 MGP_WSBEiJ_G0020645.1 mouse_genomes_project 14 49138742 49145625 - MGP_WSBEiJ_P0038573 Slc22a17 protein_coding protein_coding MGP_WSBEiJ_T0002653.1 MGP_WSBEiJ_G0002537.1 mouse_genomes_project 14 46916530 46916992 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0038283.1 MGP_WSBEiJ_G0020566.1 mouse_genomes_project 14 44268880 44269827 + MGP_WSBEiJ_P0038283 Olfr738 protein_coding protein_coding MGP_WSBEiJ_T0009827.1 MGP_WSBEiJ_G0007984.1 mouse_genomes_project 14 38517552 38517621 - Mir327 miRNA miRNA MGP_WSBEiJ_T0038905.1 MGP_WSBEiJ_G0020758.1 mouse_genomes_project 14 57013110 57086659 - MGP_WSBEiJ_P0038905 Gucy1b2 protein_coding protein_coding MGP_WSBEiJ_T0038906.1 MGP_WSBEiJ_G0020758.1 mouse_genomes_project 14 57013225 57086656 - MGP_WSBEiJ_P0038906 Gucy1b2 protein_coding protein_coding MGP_WSBEiJ_T0038907.1 MGP_WSBEiJ_G0020758.1 mouse_genomes_project 14 57040597 57085163 - MGP_WSBEiJ_P0038907 Gucy1b2 protein_coding protein_coding MGP_WSBEiJ_T0037623.1 MGP_WSBEiJ_G0020375.1 mouse_genomes_project 14 14831802 15906471 + MGP_WSBEiJ_P0037623 1700112E06Rik protein_coding protein_coding MGP_WSBEiJ_T0037624.1 MGP_WSBEiJ_G0020375.1 mouse_genomes_project 14 14831911 15674058 + MGP_WSBEiJ_P0037624 1700112E06Rik protein_coding protein_coding MGP_WSBEiJ_T0037625.1 MGP_WSBEiJ_G0020375.1 mouse_genomes_project 14 14831938 15906471 + MGP_WSBEiJ_P0037625 1700112E06Rik protein_coding protein_coding MGP_WSBEiJ_T0037626.1 MGP_WSBEiJ_G0020375.1 mouse_genomes_project 14 14831938 15555416 + MGP_WSBEiJ_P0037626 1700112E06Rik protein_coding protein_coding MGP_WSBEiJ_T0037627.1 MGP_WSBEiJ_G0020375.1 mouse_genomes_project 14 15130981 15411506 + 1700112E06Rik protein_coding processed_transcript MGP_WSBEiJ_T0037628.1 MGP_WSBEiJ_G0020375.1 mouse_genomes_project 14 15404804 15427406 + 1700112E06Rik protein_coding processed_transcript MGP_WSBEiJ_T0011179.1 MGP_WSBEiJ_G0009336.1 mouse_genomes_project 14 56254746 56255002 + Gm27928 misc_RNA misc_RNA MGP_WSBEiJ_T0037725.1 MGP_WSBEiJ_G0020397.1 mouse_genomes_project 14 19554012 19554369 + MGP_WSBEiJ_P0037725 Gm2178 protein_coding protein_coding MGP_WSBEiJ_T0003471.1 MGP_WSBEiJ_G0003160.1 mouse_genomes_project 14 40779585 40798511 - Gm10371 antisense antisense MGP_WSBEiJ_T0006631.1 MGP_WSBEiJ_G0005479.1 mouse_genomes_project 14 111951113 111954962 + Mir17hg lincRNA lincRNA MGP_WSBEiJ_T0012753.1 MGP_WSBEiJ_G0010883.1 mouse_genomes_project 14 115309724 115310194 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097858.1 MGP_WSBEiJ_G0036521.1 mouse_genomes_project 14 70579648 70579755 - Gm23622 snRNA snRNA MGP_WSBEiJ_T0000879.1 MGP_WSBEiJ_G0000817.1 mouse_genomes_project 14 44889288 44890737 - TEC TEC MGP_WSBEiJ_T0038725.1 MGP_WSBEiJ_G0020680.1 mouse_genomes_project 14 49985970 49992296 - MGP_WSBEiJ_P0038725 Rabggta protein_coding protein_coding MGP_WSBEiJ_T0038726.1 MGP_WSBEiJ_G0020680.1 mouse_genomes_project 14 49985974 49992274 - MGP_WSBEiJ_P0038726 Rabggta protein_coding protein_coding MGP_WSBEiJ_T0038727.1 MGP_WSBEiJ_G0020680.1 mouse_genomes_project 14 49986422 49992355 - MGP_WSBEiJ_P0038727 Rabggta protein_coding protein_coding MGP_WSBEiJ_T0002569.1 MGP_WSBEiJ_G0002468.1 mouse_genomes_project 14 46916530 46916992 + MGP_WSBEiJ_P0002569 TR_V_gene TR_V_gene MGP_WSBEiJ_T0037490.1 MGP_WSBEiJ_G0020336.1 mouse_genomes_project 14 10830447 10883383 - MGP_WSBEiJ_P0037490 Ube2e1 protein_coding protein_coding MGP_WSBEiJ_T0037491.1 MGP_WSBEiJ_G0020336.1 mouse_genomes_project 14 10832645 10882558 - Ube2e1 protein_coding retained_intron MGP_WSBEiJ_T0037492.1 MGP_WSBEiJ_G0020336.1 mouse_genomes_project 14 10832945 10878887 - Ube2e1 protein_coding processed_transcript MGP_WSBEiJ_T0037493.1 MGP_WSBEiJ_G0020336.1 mouse_genomes_project 14 10873748 10882621 - Ube2e1 protein_coding retained_intron MGP_WSBEiJ_T0038816.1 MGP_WSBEiJ_G0020724.1 mouse_genomes_project 14 52226708 52233509 + MGP_WSBEiJ_P0038816 Sap18 protein_coding protein_coding MGP_WSBEiJ_T0038817.1 MGP_WSBEiJ_G0020724.1 mouse_genomes_project 14 52226746 52233498 + MGP_WSBEiJ_P0038817 Sap18 protein_coding protein_coding MGP_WSBEiJ_T0038818.1 MGP_WSBEiJ_G0020724.1 mouse_genomes_project 14 52226792 52227378 + Sap18 protein_coding retained_intron MGP_WSBEiJ_T0038819.1 MGP_WSBEiJ_G0020724.1 mouse_genomes_project 14 52226811 52233495 + MGP_WSBEiJ_P0038819 Sap18 protein_coding protein_coding MGP_WSBEiJ_T0039311.1 MGP_WSBEiJ_G0020910.1 mouse_genomes_project 14 74560640 74564180 + MGP_WSBEiJ_P0039311 protein_coding protein_coding MGP_WSBEiJ_T0039179.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67971944 67988434 + Rcbtb2 protein_coding retained_intron MGP_WSBEiJ_T0039180.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67971944 67995527 + MGP_WSBEiJ_P0039180 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039181.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67975716 67997909 + MGP_WSBEiJ_P0039181 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039182.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67975738 67999695 + MGP_WSBEiJ_P0039182 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039183.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67975887 67988433 + Rcbtb2 protein_coding retained_intron MGP_WSBEiJ_T0039184.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67975903 67995578 + MGP_WSBEiJ_P0039184 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039185.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976043 68034334 + MGP_WSBEiJ_P0039185 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039186.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976139 68017976 + MGP_WSBEiJ_P0039186 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039187.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976172 67997973 + MGP_WSBEiJ_P0039187 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039188.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976189 67997274 + Rcbtb2 protein_coding retained_intron MGP_WSBEiJ_T0039189.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976197 67988002 + Rcbtb2 protein_coding retained_intron MGP_WSBEiJ_T0039190.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976242 68017963 + MGP_WSBEiJ_P0039190 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039191.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976256 68017078 + MGP_WSBEiJ_P0039191 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039192.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976279 68018134 + MGP_WSBEiJ_P0039192 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039193.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976290 67988387 + Rcbtb2 protein_coding retained_intron MGP_WSBEiJ_T0039194.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976290 68000028 + MGP_WSBEiJ_P0039194 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039195.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976337 67998040 + MGP_WSBEiJ_P0039195 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039196.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67976581 67995158 + MGP_WSBEiJ_P0039196 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039197.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67995128 68016517 + MGP_WSBEiJ_P0039197 Rcbtb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039198.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 67995128 68016520 + MGP_WSBEiJ_P0039198 Rcbtb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039199.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 68007810 68016436 + MGP_WSBEiJ_P0039199 Rcbtb2 protein_coding protein_coding MGP_WSBEiJ_T0039200.1 MGP_WSBEiJ_G0020867.1 mouse_genomes_project 14 68008371 68016600 + Rcbtb2 protein_coding retained_intron MGP_WSBEiJ_T0012714.1 MGP_WSBEiJ_G0010844.1 mouse_genomes_project 14 46590388 46590672 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037564.1 MGP_WSBEiJ_G0020363.1 mouse_genomes_project 14 13491096 13555447 - MGP_WSBEiJ_P0037564 Camk2g protein_coding protein_coding MGP_WSBEiJ_T0003494.1 MGP_WSBEiJ_G0003177.1 mouse_genomes_project 14 58818521 58823460 - 4930471C04Rik antisense antisense MGP_WSBEiJ_T0039250.1 MGP_WSBEiJ_G0020884.1 mouse_genomes_project 14 70570477 70596024 + MGP_WSBEiJ_P0039250 Erich6b protein_coding protein_coding MGP_WSBEiJ_T0009845.1 MGP_WSBEiJ_G0008002.1 mouse_genomes_project 14 61921481 61921599 + Gm27647 miRNA miRNA MGP_WSBEiJ_T0006637.1 MGP_WSBEiJ_G0005485.1 mouse_genomes_project 14 117515058 117519728 - Gm26679 lincRNA lincRNA MGP_WSBEiJ_T0037394.1 MGP_WSBEiJ_G0020304.1 mouse_genomes_project 14 481380 488450 - MGP_WSBEiJ_P0037394 Pdhb protein_coding protein_coding MGP_WSBEiJ_T0002459.1 MGP_WSBEiJ_G0002372.1 mouse_genomes_project 14 48358425 48358488 + MGP_WSBEiJ_P0002459 Traj58 TR_J_gene TR_J_gene MGP_WSBEiJ_T0037679.1 MGP_WSBEiJ_G0020387.1 mouse_genomes_project 14 18801678 18816671 - MGP_WSBEiJ_P0037679 protein_coding protein_coding MGP_WSBEiJ_T0037680.1 MGP_WSBEiJ_G0020387.1 mouse_genomes_project 14 18802061 18804555 - MGP_WSBEiJ_P0037680 protein_coding protein_coding MGP_WSBEiJ_T0037681.1 MGP_WSBEiJ_G0020387.1 mouse_genomes_project 14 18802061 18816045 - MGP_WSBEiJ_P0037681 protein_coding protein_coding MGP_WSBEiJ_T0037683.1 MGP_WSBEiJ_G0020387.1 mouse_genomes_project 14 18802105 18816047 - MGP_WSBEiJ_P0037683 protein_coding protein_coding MGP_WSBEiJ_T0038030.1 MGP_WSBEiJ_G0020472.1 mouse_genomes_project 14 26791441 26898706 + MGP_WSBEiJ_P0038030 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0009854.1 MGP_WSBEiJ_G0008011.1 mouse_genomes_project 14 74864154 74864252 + Mir759 miRNA miRNA MGP_WSBEiJ_T0038586.1 MGP_WSBEiJ_G0020652.1 mouse_genomes_project 14 49264028 49272913 + MGP_WSBEiJ_P0038586 Ngdn protein_coding protein_coding MGP_WSBEiJ_T0012694.1 MGP_WSBEiJ_G0010824.1 mouse_genomes_project 14 15381370 15381742 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038266.1 MGP_WSBEiJ_G0020553.1 mouse_genomes_project 14 43878940 43879975 - MGP_WSBEiJ_P0038266 Olfr727 protein_coding protein_coding MGP_WSBEiJ_T0039493.1 MGP_WSBEiJ_G0020979.1 mouse_genomes_project 14 119092631 119237055 + MGP_WSBEiJ_P0039493 Ubac2 protein_coding protein_coding MGP_WSBEiJ_T0039450.1 MGP_WSBEiJ_G0020961.1 mouse_genomes_project 14 115143972 115165672 - MGP_WSBEiJ_P0039450 Tgds protein_coding protein_coding MGP_WSBEiJ_T0038976.1 MGP_WSBEiJ_G0020788.1 mouse_genomes_project 14 59789126 59835294 - MGP_WSBEiJ_P0038976 Extl3 protein_coding protein_coding MGP_WSBEiJ_T0038752.1 MGP_WSBEiJ_G0020694.1 mouse_genomes_project 14 50315302 50317730 + MGP_WSBEiJ_P0038752 Mcpt1 protein_coding protein_coding MGP_WSBEiJ_T0039304.1 MGP_WSBEiJ_G0020907.1 mouse_genomes_project 14 74434916 74444569 - Naa16 protein_coding retained_intron MGP_WSBEiJ_T0039305.1 MGP_WSBEiJ_G0020907.1 mouse_genomes_project 14 74435219 74496273 - MGP_WSBEiJ_P0039305 Naa16 protein_coding protein_coding MGP_WSBEiJ_T0039306.1 MGP_WSBEiJ_G0020907.1 mouse_genomes_project 14 74442345 74492574 - MGP_WSBEiJ_P0039306 Naa16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039307.1 MGP_WSBEiJ_G0020907.1 mouse_genomes_project 14 74470881 74496185 - MGP_WSBEiJ_P0039307 Naa16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039308.1 MGP_WSBEiJ_G0020907.1 mouse_genomes_project 14 74490098 74496183 - Naa16 protein_coding retained_intron MGP_WSBEiJ_T0038590.1 MGP_WSBEiJ_G0020654.1 mouse_genomes_project 14 49310049 49343545 - MGP_WSBEiJ_P0038590 Zfhx2 protein_coding protein_coding MGP_WSBEiJ_T0038591.1 MGP_WSBEiJ_G0020654.1 mouse_genomes_project 14 49315990 49322046 - Zfhx2 protein_coding retained_intron MGP_WSBEiJ_T0038592.1 MGP_WSBEiJ_G0020654.1 mouse_genomes_project 14 49324383 49330252 - Zfhx2 protein_coding retained_intron MGP_WSBEiJ_T0038593.1 MGP_WSBEiJ_G0020654.1 mouse_genomes_project 14 49340788 49343263 - Zfhx2 protein_coding retained_intron MGP_WSBEiJ_T0038663.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49853877 49858532 - MGP_WSBEiJ_P0038663 Psme2 protein_coding protein_coding MGP_WSBEiJ_T0038664.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49853878 49858546 - MGP_WSBEiJ_P0038664 Psme2 protein_coding protein_coding MGP_WSBEiJ_T0038665.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49853883 49855246 - Psme2 protein_coding retained_intron MGP_WSBEiJ_T0038666.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49853883 49856153 - Psme2 protein_coding retained_intron MGP_WSBEiJ_T0038667.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49854697 49857594 - Psme2 protein_coding retained_intron MGP_WSBEiJ_T0038668.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49854715 49858558 - MGP_WSBEiJ_P0038668 Psme2 protein_coding protein_coding MGP_WSBEiJ_T0038669.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49854726 49858309 - Psme2 protein_coding retained_intron MGP_WSBEiJ_T0038670.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49855835 49858418 - Psme2 protein_coding retained_intron MGP_WSBEiJ_T0038671.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49855958 49858393 - Psme2 protein_coding retained_intron MGP_WSBEiJ_T0038672.1 MGP_WSBEiJ_G0020668.1 mouse_genomes_project 14 49857442 49858340 - Psme2 protein_coding retained_intron MGP_WSBEiJ_T0097842.1 MGP_WSBEiJ_G0036505.1 mouse_genomes_project 14 42564918 42565023 - Gm22699 snRNA snRNA MGP_WSBEiJ_T0099133.1 MGP_WSBEiJ_G0037796.1 mouse_genomes_project 14 121132718 121132846 + Gm25272 snoRNA snoRNA MGP_WSBEiJ_T0100575.1 MGP_WSBEiJ_G0039033.1 mouse_genomes_project 14 55749307 55773452 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016789.1 MGP_WSBEiJ_G0014688.1 mouse_genomes_project 14 38384193 38529515 + processed_transcript processed_transcript MGP_WSBEiJ_T0039245.1 MGP_WSBEiJ_G0020882.1 mouse_genomes_project 14 70370431 70446526 + MGP_WSBEiJ_P0039245 Siah3 protein_coding protein_coding MGP_WSBEiJ_T0097880.1 MGP_WSBEiJ_G0036543.1 mouse_genomes_project 14 117943570 117943654 + Gm25781 snRNA snRNA MGP_WSBEiJ_T0011171.1 MGP_WSBEiJ_G0009328.1 mouse_genomes_project 14 28959472 28959640 + Gm27617 misc_RNA misc_RNA MGP_WSBEiJ_T0002474.1 MGP_WSBEiJ_G0002384.1 mouse_genomes_project 14 48375758 48375815 + MGP_WSBEiJ_P0002474 Traj43 TR_J_gene TR_J_gene MGP_WSBEiJ_T0097830.1 MGP_WSBEiJ_G0036493.1 mouse_genomes_project 14 10629730 10629793 + Gm27851 snRNA snRNA MGP_WSBEiJ_T0038779.1 MGP_WSBEiJ_G0020712.1 mouse_genomes_project 14 51161633 51187570 - MGP_WSBEiJ_P0038779 protein_coding protein_coding MGP_WSBEiJ_T0038780.1 MGP_WSBEiJ_G0020712.1 mouse_genomes_project 14 51163382 51182430 - MGP_WSBEiJ_P0038780 protein_coding unknown_likely_coding MGP_WSBEiJ_T0003461.1 MGP_WSBEiJ_G0003150.1 mouse_genomes_project 14 19715805 19716303 + 9930004E17Rik antisense antisense MGP_WSBEiJ_T0038275.1 MGP_WSBEiJ_G0020561.1 mouse_genomes_project 14 44143719 44144713 - MGP_WSBEiJ_P0038275 Olfr733 protein_coding protein_coding MGP_WSBEiJ_T0039313.1 MGP_WSBEiJ_G0020912.1 mouse_genomes_project 14 74592757 74700863 + MGP_WSBEiJ_P0039313 Elf1 protein_coding protein_coding MGP_WSBEiJ_T0039314.1 MGP_WSBEiJ_G0020912.1 mouse_genomes_project 14 74630844 74700862 + MGP_WSBEiJ_P0039314 Elf1 protein_coding protein_coding MGP_WSBEiJ_T0037894.1 MGP_WSBEiJ_G0020437.1 mouse_genomes_project 14 24408507 24413329 + MGP_WSBEiJ_P0037894 Tnnc1 protein_coding protein_coding MGP_WSBEiJ_T0037895.1 MGP_WSBEiJ_G0020437.1 mouse_genomes_project 14 24408525 24413236 + MGP_WSBEiJ_P0037895 Tnnc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037896.1 MGP_WSBEiJ_G0020437.1 mouse_genomes_project 14 24408527 24412580 + Tnnc1 protein_coding retained_intron MGP_WSBEiJ_T0038031.1 MGP_WSBEiJ_G0020473.1 mouse_genomes_project 14 26911699 26963900 + MGP_WSBEiJ_P0038031 Ptpn20 protein_coding protein_coding MGP_WSBEiJ_T0037562.1 MGP_WSBEiJ_G0020361.1 mouse_genomes_project 14 13463895 13479830 + MGP_WSBEiJ_P0037562 Zswim8 protein_coding protein_coding MGP_WSBEiJ_T0006573.1 MGP_WSBEiJ_G0005436.1 mouse_genomes_project 14 19419008 19425517 + Slmapos2 lincRNA lincRNA MGP_WSBEiJ_T0038317.1 MGP_WSBEiJ_G0020581.1 mouse_genomes_project 14 44881782 44892138 + MGP_WSBEiJ_P0038317 Pnp protein_coding protein_coding MGP_WSBEiJ_T0038318.1 MGP_WSBEiJ_G0020581.1 mouse_genomes_project 14 44881987 44890751 + MGP_WSBEiJ_P0038318 Pnp protein_coding protein_coding MGP_WSBEiJ_T0039374.1 MGP_WSBEiJ_G0020936.1 mouse_genomes_project 14 97935828 97936263 - MGP_WSBEiJ_P0039374 Gm9922 protein_coding protein_coding MGP_WSBEiJ_T0012693.1 MGP_WSBEiJ_G0010823.1 mouse_genomes_project 14 13131647 13131771 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016840.1 MGP_WSBEiJ_G0014707.1 mouse_genomes_project 14 119714369 119718905 - 2610035F20Rik processed_transcript retained_intron MGP_WSBEiJ_T0016841.1 MGP_WSBEiJ_G0014707.1 mouse_genomes_project 14 119714462 119721837 - 2610035F20Rik processed_transcript processed_transcript MGP_WSBEiJ_T0039329.1 MGP_WSBEiJ_G0020919.1 mouse_genomes_project 14 82122963 82631286 - MGP_WSBEiJ_P0039329 Diaph3 protein_coding protein_coding MGP_WSBEiJ_T0039330.1 MGP_WSBEiJ_G0020919.1 mouse_genomes_project 14 82123881 82631176 - MGP_WSBEiJ_P0039330 Diaph3 protein_coding protein_coding MGP_WSBEiJ_T0100569.1 MGP_WSBEiJ_G0039027.1 mouse_genomes_project 14 18789310 18797923 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0003476.1 MGP_WSBEiJ_G0003164.1 mouse_genomes_project 14 48861310 48865430 + 4930579G18Rik antisense antisense MGP_WSBEiJ_T0003455.1 MGP_WSBEiJ_G0003145.1 mouse_genomes_project 14 15888602 15947761 - Gm10248 antisense antisense MGP_WSBEiJ_T0037529.1 MGP_WSBEiJ_G0020351.1 mouse_genomes_project 14 13140472 13196530 - MGP_WSBEiJ_P0037529 Cfap70 protein_coding protein_coding MGP_WSBEiJ_T0037530.1 MGP_WSBEiJ_G0020351.1 mouse_genomes_project 14 13140472 13196530 - MGP_WSBEiJ_P0037530 Cfap70 protein_coding protein_coding MGP_WSBEiJ_T0037531.1 MGP_WSBEiJ_G0020351.1 mouse_genomes_project 14 13140475 13196527 - MGP_WSBEiJ_P0037531 Cfap70 protein_coding protein_coding MGP_WSBEiJ_T0037532.1 MGP_WSBEiJ_G0020351.1 mouse_genomes_project 14 13140477 13196133 - MGP_WSBEiJ_P0037532 Cfap70 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037533.1 MGP_WSBEiJ_G0020351.1 mouse_genomes_project 14 13169628 13196531 - Cfap70 protein_coding retained_intron MGP_WSBEiJ_T0037534.1 MGP_WSBEiJ_G0020351.1 mouse_genomes_project 14 13170129 13174297 - Cfap70 protein_coding processed_transcript MGP_WSBEiJ_T0037535.1 MGP_WSBEiJ_G0020351.1 mouse_genomes_project 14 13183973 13196528 - MGP_WSBEiJ_P0037535 Cfap70 protein_coding protein_coding MGP_WSBEiJ_T0037536.1 MGP_WSBEiJ_G0020351.1 mouse_genomes_project 14 13191669 13193028 - Cfap70 protein_coding retained_intron MGP_WSBEiJ_T0037753.1 MGP_WSBEiJ_G0020408.1 mouse_genomes_project 14 20570273 20596687 - MGP_WSBEiJ_P0037753 Ccdc66 protein_coding protein_coding MGP_WSBEiJ_T0039204.1 MGP_WSBEiJ_G0020869.1 mouse_genomes_project 14 68066267 68072800 + MGP_WSBEiJ_P0039204 Lpar6 protein_coding protein_coding MGP_WSBEiJ_T0009829.1 MGP_WSBEiJ_G0007986.1 mouse_genomes_project 14 40630653 40630752 - Mir378c miRNA miRNA MGP_WSBEiJ_T0037456.1 MGP_WSBEiJ_G0020327.1 mouse_genomes_project 14 7264334 7492489 + MGP_WSBEiJ_P0037456 Nek10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037457.1 MGP_WSBEiJ_G0020327.1 mouse_genomes_project 14 7279120 7482296 + MGP_WSBEiJ_P0037457 Nek10 protein_coding protein_coding MGP_WSBEiJ_T0037458.1 MGP_WSBEiJ_G0020327.1 mouse_genomes_project 14 7279170 7487130 + MGP_WSBEiJ_P0037458 Nek10 protein_coding protein_coding MGP_WSBEiJ_T0037459.1 MGP_WSBEiJ_G0020327.1 mouse_genomes_project 14 7328422 7449468 + Nek10 protein_coding processed_transcript MGP_WSBEiJ_T0037460.1 MGP_WSBEiJ_G0020327.1 mouse_genomes_project 14 7332712 7452309 + Nek10 protein_coding retained_intron MGP_WSBEiJ_T0037461.1 MGP_WSBEiJ_G0020327.1 mouse_genomes_project 14 7402811 7487180 + MGP_WSBEiJ_P0037461 Nek10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037767.1 MGP_WSBEiJ_G0020414.1 mouse_genomes_project 14 23118898 23133848 + MGP_WSBEiJ_P0037767 Actr8 protein_coding protein_coding MGP_WSBEiJ_T0037825.1 MGP_WSBEiJ_G0020427.1 mouse_genomes_project 14 24111301 24128419 - MGP_WSBEiJ_P0037825 Itih1 protein_coding protein_coding MGP_WSBEiJ_T0037826.1 MGP_WSBEiJ_G0020427.1 mouse_genomes_project 14 24111301 24128407 - MGP_WSBEiJ_P0037826 Itih1 protein_coding protein_coding MGP_WSBEiJ_T0037827.1 MGP_WSBEiJ_G0020427.1 mouse_genomes_project 14 24127819 24128416 - Itih1 protein_coding retained_intron MGP_WSBEiJ_T0012705.1 MGP_WSBEiJ_G0010835.1 mouse_genomes_project 14 34093496 34094499 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099119.1 MGP_WSBEiJ_G0037782.1 mouse_genomes_project 14 93304673 93304811 - Gm23276 snoRNA snoRNA MGP_WSBEiJ_T0038829.1 MGP_WSBEiJ_G0020730.1 mouse_genomes_project 14 53597061 53612669 - MGP_WSBEiJ_P0038829 1700129C05Rik protein_coding protein_coding MGP_WSBEiJ_T0038830.1 MGP_WSBEiJ_G0020730.1 mouse_genomes_project 14 53597260 53612669 - MGP_WSBEiJ_P0038830 1700129C05Rik protein_coding protein_coding MGP_WSBEiJ_T0038831.1 MGP_WSBEiJ_G0020730.1 mouse_genomes_project 14 53597263 53612669 - MGP_WSBEiJ_P0038831 1700129C05Rik protein_coding protein_coding MGP_WSBEiJ_T0038832.1 MGP_WSBEiJ_G0020730.1 mouse_genomes_project 14 53611109 53612669 - MGP_WSBEiJ_P0038832 1700129C05Rik protein_coding protein_coding MGP_WSBEiJ_T0003441.1 MGP_WSBEiJ_G0003139.1 mouse_genomes_project 14 4366176 4384181 - Gm3848 antisense antisense MGP_WSBEiJ_T0003442.1 MGP_WSBEiJ_G0003139.1 mouse_genomes_project 14 4383172 4384166 - Gm3848 antisense antisense MGP_WSBEiJ_T0039462.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116057099 116081638 - Uggt2 protein_coding retained_intron MGP_WSBEiJ_T0039463.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116057099 116176483 - MGP_WSBEiJ_P0039463 Uggt2 protein_coding protein_coding MGP_WSBEiJ_T0039464.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116058252 116081398 - Uggt2 protein_coding retained_intron MGP_WSBEiJ_T0039465.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116058477 116080919 - Uggt2 protein_coding processed_transcript MGP_WSBEiJ_T0039466.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116058874 116081572 - Uggt2 protein_coding retained_intron MGP_WSBEiJ_T0039467.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116070250 116083236 - Uggt2 protein_coding processed_transcript MGP_WSBEiJ_T0039468.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116073911 116082344 - Uggt2 protein_coding retained_intron MGP_WSBEiJ_T0039469.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116074077 116081731 - Uggt2 protein_coding processed_transcript MGP_WSBEiJ_T0039470.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116075023 116093581 - MGP_WSBEiJ_P0039470 Uggt2 protein_coding protein_coding MGP_WSBEiJ_T0039471.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116088583 116134312 - MGP_WSBEiJ_P0039471 Uggt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039472.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116088583 116107488 - MGP_WSBEiJ_P0039472 Uggt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039473.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116107615 116111126 - Uggt2 protein_coding retained_intron MGP_WSBEiJ_T0039474.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116119315 116125757 - Uggt2 protein_coding retained_intron MGP_WSBEiJ_T0039475.1 MGP_WSBEiJ_G0020969.1 mouse_genomes_project 14 116136187 116176483 - Uggt2 protein_coding retained_intron MGP_WSBEiJ_T0039168.1 MGP_WSBEiJ_G0020863.1 mouse_genomes_project 14 65657817 65749054 + MGP_WSBEiJ_P0039168 Gfra2 protein_coding protein_coding MGP_WSBEiJ_T0037576.1 MGP_WSBEiJ_G0020367.1 mouse_genomes_project 14 13821188 14228463 + MGP_WSBEiJ_P0037576 Adk protein_coding protein_coding MGP_WSBEiJ_T0037577.1 MGP_WSBEiJ_G0020367.1 mouse_genomes_project 14 13844789 14227829 + MGP_WSBEiJ_P0037577 Adk protein_coding unknown_likely_coding MGP_WSBEiJ_T0096964.1 MGP_WSBEiJ_G0035645.1 mouse_genomes_project 14 99060073 99060121 + Gm23764 rRNA rRNA MGP_WSBEiJ_T0012698.1 MGP_WSBEiJ_G0010828.1 mouse_genomes_project 14 18851846 18853068 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002570.1 MGP_WSBEiJ_G0002469.1 mouse_genomes_project 14 46920360 46920867 + MGP_WSBEiJ_P0002570 TR_V_gene TR_V_gene MGP_WSBEiJ_T0038951.1 MGP_WSBEiJ_G0020777.1 mouse_genomes_project 14 58570050 58630922 + MGP_WSBEiJ_P0038951 Pinx1 protein_coding protein_coding MGP_WSBEiJ_T0002530.1 MGP_WSBEiJ_G0002438.1 mouse_genomes_project 14 48363118 48363172 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0037677.1 MGP_WSBEiJ_G0020385.1 mouse_genomes_project 14 18801169 18816516 - MGP_WSBEiJ_P0037677 Plac9a protein_coding protein_coding MGP_WSBEiJ_T0037684.1 MGP_WSBEiJ_G0020385.1 mouse_genomes_project 14 18802545 18816479 - MGP_WSBEiJ_P0037684 Plac9a protein_coding protein_coding MGP_WSBEiJ_T0096961.1 MGP_WSBEiJ_G0035642.1 mouse_genomes_project 14 72537553 72537663 + n-R5s48 rRNA rRNA MGP_WSBEiJ_T0038900.1 MGP_WSBEiJ_G0020756.1 mouse_genomes_project 14 56885536 56906676 - MGP_WSBEiJ_P0038900 Dleu7 protein_coding protein_coding MGP_WSBEiJ_T0099110.1 MGP_WSBEiJ_G0037773.1 mouse_genomes_project 14 78732997 78733131 + Gm24774 snoRNA snoRNA MGP_WSBEiJ_T0012727.1 MGP_WSBEiJ_G0010857.1 mouse_genomes_project 14 54668897 54669102 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038076.1 MGP_WSBEiJ_G0020496.1 mouse_genomes_project 14 29219703 29222223 - MGP_WSBEiJ_P0038076 4930596D02Rik protein_coding protein_coding MGP_WSBEiJ_T0099081.1 MGP_WSBEiJ_G0037744.1 mouse_genomes_project 14 20615844 20615942 - Gm25697 snoRNA snoRNA MGP_WSBEiJ_T0006582.1 MGP_WSBEiJ_G0005444.1 mouse_genomes_project 14 39581566 39606668 + lincRNA lincRNA MGP_WSBEiJ_T0009843.1 MGP_WSBEiJ_G0008000.1 mouse_genomes_project 14 59307174 59307259 + Mir124a-1 miRNA miRNA MGP_WSBEiJ_T0037652.1 MGP_WSBEiJ_G0020378.1 mouse_genomes_project 14 17208382 17220733 + MGP_WSBEiJ_P0037652 protein_coding protein_coding MGP_WSBEiJ_T0037653.1 MGP_WSBEiJ_G0020378.1 mouse_genomes_project 14 17208404 17219038 + MGP_WSBEiJ_P0037653 protein_coding protein_coding MGP_WSBEiJ_T0037654.1 MGP_WSBEiJ_G0020378.1 mouse_genomes_project 14 17208452 17213453 + protein_coding retained_intron MGP_WSBEiJ_T0037655.1 MGP_WSBEiJ_G0020378.1 mouse_genomes_project 14 17208487 17220740 + MGP_WSBEiJ_P0037655 protein_coding protein_coding MGP_WSBEiJ_T0037656.1 MGP_WSBEiJ_G0020378.1 mouse_genomes_project 14 17208500 17213222 + MGP_WSBEiJ_P0037656 protein_coding protein_coding MGP_WSBEiJ_T0037657.1 MGP_WSBEiJ_G0020378.1 mouse_genomes_project 14 17208532 17220733 + MGP_WSBEiJ_P0037657 protein_coding protein_coding MGP_WSBEiJ_T0003482.1 MGP_WSBEiJ_G0003169.1 mouse_genomes_project 14 49830579 49840915 - Gm15932 antisense antisense MGP_WSBEiJ_T0038552.1 MGP_WSBEiJ_G0020639.1 mouse_genomes_project 14 48935341 48996082 - MGP_WSBEiJ_P0038552 Slc7a8 protein_coding protein_coding MGP_WSBEiJ_T0037756.1 MGP_WSBEiJ_G0020410.1 mouse_genomes_project 14 21612470 21615693 + Wnt5a protein_coding processed_transcript MGP_WSBEiJ_T0037757.1 MGP_WSBEiJ_G0020410.1 mouse_genomes_project 14 21612679 21633922 + MGP_WSBEiJ_P0037757 Wnt5a protein_coding protein_coding MGP_WSBEiJ_T0037758.1 MGP_WSBEiJ_G0020410.1 mouse_genomes_project 14 21617192 21618500 + Wnt5a protein_coding processed_transcript MGP_WSBEiJ_T0037759.1 MGP_WSBEiJ_G0020410.1 mouse_genomes_project 14 21617964 21629995 + Wnt5a protein_coding processed_transcript MGP_WSBEiJ_T0037760.1 MGP_WSBEiJ_G0020410.1 mouse_genomes_project 14 21618025 21618482 + Wnt5a protein_coding processed_transcript MGP_WSBEiJ_T0039300.1 MGP_WSBEiJ_G0020905.1 mouse_genomes_project 14 74298700 74333185 - MGP_WSBEiJ_P0039300 Zfp957 protein_coding protein_coding MGP_WSBEiJ_T0039301.1 MGP_WSBEiJ_G0020905.1 mouse_genomes_project 14 74298702 74309781 - MGP_WSBEiJ_P0039301 Zfp957 protein_coding protein_coding MGP_WSBEiJ_T0039302.1 MGP_WSBEiJ_G0020905.1 mouse_genomes_project 14 74308837 74333258 - Zfp957 protein_coding retained_intron MGP_WSBEiJ_T0097848.1 MGP_WSBEiJ_G0036511.1 mouse_genomes_project 14 46504383 46504487 + Gm26328 snRNA snRNA MGP_WSBEiJ_T0002557.1 MGP_WSBEiJ_G0002459.1 mouse_genomes_project 14 46829817 46830325 + MGP_WSBEiJ_P0002557 TR_V_gene TR_V_gene MGP_WSBEiJ_T0003507.1 MGP_WSBEiJ_G0003186.1 mouse_genomes_project 14 70104524 70106744 - Gm15629 antisense antisense MGP_WSBEiJ_T0039262.1 MGP_WSBEiJ_G0020891.1 mouse_genomes_project 14 71066614 71093100 + MGP_WSBEiJ_P0039262 Nufip1 protein_coding protein_coding MGP_WSBEiJ_T0037829.1 MGP_WSBEiJ_G0020429.1 mouse_genomes_project 14 24192341 24194125 - MGP_WSBEiJ_P0037829 Spcs1 protein_coding protein_coding MGP_WSBEiJ_T0037830.1 MGP_WSBEiJ_G0020429.1 mouse_genomes_project 14 24192341 24194188 - MGP_WSBEiJ_P0037830 Spcs1 protein_coding protein_coding MGP_WSBEiJ_T0037831.1 MGP_WSBEiJ_G0020429.1 mouse_genomes_project 14 24192342 24194182 - MGP_WSBEiJ_P0037831 Spcs1 protein_coding protein_coding MGP_WSBEiJ_T0037832.1 MGP_WSBEiJ_G0020429.1 mouse_genomes_project 14 24192342 24193879 - MGP_WSBEiJ_P0037832 Spcs1 protein_coding protein_coding MGP_WSBEiJ_T0037833.1 MGP_WSBEiJ_G0020429.1 mouse_genomes_project 14 24192343 24193885 - Spcs1 protein_coding retained_intron MGP_WSBEiJ_T0037834.1 MGP_WSBEiJ_G0020429.1 mouse_genomes_project 14 24192732 24193866 - Spcs1 protein_coding retained_intron MGP_WSBEiJ_T0037835.1 MGP_WSBEiJ_G0020429.1 mouse_genomes_project 14 24192911 24193883 - MGP_WSBEiJ_P0037835 Spcs1 protein_coding protein_coding MGP_WSBEiJ_T0038198.1 MGP_WSBEiJ_G0020539.1 mouse_genomes_project 14 41179512 41239530 + MGP_WSBEiJ_P0038198 protein_coding protein_coding MGP_WSBEiJ_T0000895.1 MGP_WSBEiJ_G0000833.1 mouse_genomes_project 14 82689225 82689601 - TEC TEC MGP_WSBEiJ_T0003481.1 MGP_WSBEiJ_G0003168.1 mouse_genomes_project 14 49322901 49325688 + Zfhx2os antisense antisense MGP_WSBEiJ_T0003516.1 MGP_WSBEiJ_G0003192.1 mouse_genomes_project 14 120216745 120220983 + Gm15735 antisense antisense MGP_WSBEiJ_T0038962.1 MGP_WSBEiJ_G0020784.1 mouse_genomes_project 14 58843123 59185303 - MGP_WSBEiJ_P0038962 Msra protein_coding protein_coding MGP_WSBEiJ_T0006607.1 MGP_WSBEiJ_G0005462.1 mouse_genomes_project 14 56212965 56214379 - Gm27010 lincRNA lincRNA MGP_WSBEiJ_T0009824.1 MGP_WSBEiJ_G0007981.1 mouse_genomes_project 14 23129518 23129583 + Mir6947 miRNA miRNA MGP_WSBEiJ_T0039176.1 MGP_WSBEiJ_G0020865.1 mouse_genomes_project 14 67801221 67807848 - MGP_WSBEiJ_P0039176 protein_coding protein_coding MGP_WSBEiJ_T0037540.1 MGP_WSBEiJ_G0020353.1 mouse_genomes_project 14 13229704 13245050 - MGP_WSBEiJ_P0037540 Mss51 protein_coding protein_coding MGP_WSBEiJ_T0012686.1 MGP_WSBEiJ_G0010816.1 mouse_genomes_project 14 5292026 5292359 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037405.1 MGP_WSBEiJ_G0020307.1 mouse_genomes_project 14 625058 638560 - MGP_WSBEiJ_P0037405 Fam107a protein_coding protein_coding MGP_WSBEiJ_T0037406.1 MGP_WSBEiJ_G0020307.1 mouse_genomes_project 14 625058 638562 - MGP_WSBEiJ_P0037406 Fam107a protein_coding protein_coding MGP_WSBEiJ_T0037407.1 MGP_WSBEiJ_G0020307.1 mouse_genomes_project 14 626338 647443 - MGP_WSBEiJ_P0037407 Fam107a protein_coding protein_coding MGP_WSBEiJ_T0037408.1 MGP_WSBEiJ_G0020307.1 mouse_genomes_project 14 628319 638578 - MGP_WSBEiJ_P0037408 Fam107a protein_coding protein_coding MGP_WSBEiJ_T0003515.1 MGP_WSBEiJ_G0003191.1 mouse_genomes_project 14 119464852 119468599 - 1700108J01Rik antisense antisense MGP_WSBEiJ_T0012699.1 MGP_WSBEiJ_G0010829.1 mouse_genomes_project 14 19396889 19397754 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011174.1 MGP_WSBEiJ_G0009331.1 mouse_genomes_project 14 48323279 48323619 + Gm23704 misc_RNA misc_RNA MGP_WSBEiJ_T0039230.1 MGP_WSBEiJ_G0020878.1 mouse_genomes_project 14 69986386 70033516 - MGP_WSBEiJ_P0039230 Lrrc63 protein_coding protein_coding MGP_WSBEiJ_T0012737.1 MGP_WSBEiJ_G0010867.1 mouse_genomes_project 14 75494882 75495635 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039071.1 MGP_WSBEiJ_G0020822.1 mouse_genomes_project 14 63397766 63435021 - MGP_WSBEiJ_P0039071 Adam7 protein_coding protein_coding MGP_WSBEiJ_T0039072.1 MGP_WSBEiJ_G0020822.1 mouse_genomes_project 14 63398258 63411503 - Adam7 protein_coding retained_intron MGP_WSBEiJ_T0099097.1 MGP_WSBEiJ_G0037760.1 mouse_genomes_project 14 51735343 51735463 - Gm23593 snoRNA snoRNA MGP_WSBEiJ_T0012754.1 MGP_WSBEiJ_G0010884.1 mouse_genomes_project 14 119703381 119708211 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039395.1 MGP_WSBEiJ_G0020941.1 mouse_genomes_project 14 99338386 99358241 - MGP_WSBEiJ_P0039395 protein_coding protein_coding MGP_WSBEiJ_T0039396.1 MGP_WSBEiJ_G0020941.1 mouse_genomes_project 14 99339255 99357831 - MGP_WSBEiJ_P0039396 protein_coding protein_coding MGP_WSBEiJ_T0039397.1 MGP_WSBEiJ_G0020941.1 mouse_genomes_project 14 99339905 99357807 - MGP_WSBEiJ_P0039397 protein_coding protein_coding MGP_WSBEiJ_T0039398.1 MGP_WSBEiJ_G0020941.1 mouse_genomes_project 14 99341326 99348416 - protein_coding retained_intron MGP_WSBEiJ_T0039399.1 MGP_WSBEiJ_G0020941.1 mouse_genomes_project 14 99348012 99358253 - MGP_WSBEiJ_P0039399 protein_coding protein_coding MGP_WSBEiJ_T0039400.1 MGP_WSBEiJ_G0020941.1 mouse_genomes_project 14 99348050 99354576 - MGP_WSBEiJ_P0039400 protein_coding protein_coding MGP_WSBEiJ_T0002506.1 MGP_WSBEiJ_G0002416.1 mouse_genomes_project 14 48414233 48414292 + MGP_WSBEiJ_P0002506 Traj7 TR_J_gene TR_J_gene MGP_WSBEiJ_T0037565.1 MGP_WSBEiJ_G0020364.1 mouse_genomes_project 14 13600036 13606726 + MGP_WSBEiJ_P0037565 Plau protein_coding protein_coding MGP_WSBEiJ_T0038986.1 MGP_WSBEiJ_G0020795.1 mouse_genomes_project 14 60418888 60526949 + MGP_WSBEiJ_P0038986 Scara5 protein_coding protein_coding MGP_WSBEiJ_T0038987.1 MGP_WSBEiJ_G0020795.1 mouse_genomes_project 14 60418922 60503714 + MGP_WSBEiJ_P0038987 Scara5 protein_coding protein_coding MGP_WSBEiJ_T0038988.1 MGP_WSBEiJ_G0020795.1 mouse_genomes_project 14 60428962 60503561 + Scara5 protein_coding processed_transcript MGP_WSBEiJ_T0016815.1 MGP_WSBEiJ_G0014697.1 mouse_genomes_project 14 71668989 71683883 + 1700108F19Rik processed_transcript lincRNA MGP_WSBEiJ_T0016816.1 MGP_WSBEiJ_G0014697.1 mouse_genomes_project 14 71673592 71683806 + 1700108F19Rik processed_transcript lincRNA MGP_WSBEiJ_T0016817.1 MGP_WSBEiJ_G0014697.1 mouse_genomes_project 14 71673605 71675857 + 1700108F19Rik processed_transcript retained_intron MGP_WSBEiJ_T0016818.1 MGP_WSBEiJ_G0014697.1 mouse_genomes_project 14 71673605 71683822 + 1700108F19Rik processed_transcript lincRNA MGP_WSBEiJ_T0016819.1 MGP_WSBEiJ_G0014697.1 mouse_genomes_project 14 71673633 71683809 + 1700108F19Rik processed_transcript lincRNA MGP_WSBEiJ_T0016820.1 MGP_WSBEiJ_G0014697.1 mouse_genomes_project 14 71673636 71676415 + 1700108F19Rik processed_transcript lincRNA MGP_WSBEiJ_T0016821.1 MGP_WSBEiJ_G0014697.1 mouse_genomes_project 14 71673680 71676415 + 1700108F19Rik processed_transcript lincRNA MGP_WSBEiJ_T0016822.1 MGP_WSBEiJ_G0014697.1 mouse_genomes_project 14 71677780 71683601 + 1700108F19Rik processed_transcript lincRNA MGP_WSBEiJ_T0002492.1 MGP_WSBEiJ_G0002402.1 mouse_genomes_project 14 48398430 48398493 + MGP_WSBEiJ_P0002492 Traj24 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038912.1 MGP_WSBEiJ_G0020760.1 mouse_genomes_project 14 57299436 57328879 + MGP_WSBEiJ_P0038912 Serpine3 protein_coding protein_coding MGP_WSBEiJ_T0039501.1 MGP_WSBEiJ_G0020985.1 mouse_genomes_project 14 119677871 119695184 - MGP_WSBEiJ_P0039501 Gm5089 protein_coding protein_coding MGP_WSBEiJ_T0097876.1 MGP_WSBEiJ_G0036539.1 mouse_genomes_project 14 107323212 107323315 + Gm26255 snRNA snRNA MGP_WSBEiJ_T0039326.1 MGP_WSBEiJ_G0020917.1 mouse_genomes_project 14 75139062 75161378 + MGP_WSBEiJ_P0039326 Olfm4 protein_coding protein_coding MGP_WSBEiJ_T0039327.1 MGP_WSBEiJ_G0020917.1 mouse_genomes_project 14 75139085 75161378 + MGP_WSBEiJ_P0039327 Olfm4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012712.1 MGP_WSBEiJ_G0010842.1 mouse_genomes_project 14 39647094 39648445 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002495.1 MGP_WSBEiJ_G0002405.1 mouse_genomes_project 14 48401584 48401641 + MGP_WSBEiJ_P0002495 Traj21 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002476.1 MGP_WSBEiJ_G0002386.1 mouse_genomes_project 14 48377235 48377290 + MGP_WSBEiJ_P0002476 Traj41 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038350.1 MGP_WSBEiJ_G0020595.1 mouse_genomes_project 14 46021775 46025419 + Slc39a2 protein_coding retained_intron MGP_WSBEiJ_T0038351.1 MGP_WSBEiJ_G0020595.1 mouse_genomes_project 14 46023246 46026361 + MGP_WSBEiJ_P0038351 Slc39a2 protein_coding protein_coding MGP_WSBEiJ_T0038352.1 MGP_WSBEiJ_G0020595.1 mouse_genomes_project 14 46023293 46025412 + MGP_WSBEiJ_P0038352 Slc39a2 protein_coding protein_coding MGP_WSBEiJ_T0099084.1 MGP_WSBEiJ_G0037747.1 mouse_genomes_project 14 24209869 24209945 - Snord19 snoRNA snoRNA MGP_WSBEiJ_T0003480.1 MGP_WSBEiJ_G0003167.1 mouse_genomes_project 14 49303667 49322209 + Gm20687 antisense antisense MGP_WSBEiJ_T0039490.1 MGP_WSBEiJ_G0020978.1 mouse_genomes_project 14 118736722 118896970 - MGP_WSBEiJ_P0039490 Dock9 protein_coding protein_coding MGP_WSBEiJ_T0039491.1 MGP_WSBEiJ_G0020978.1 mouse_genomes_project 14 118736722 119005450 - MGP_WSBEiJ_P0039491 Dock9 protein_coding protein_coding MGP_WSBEiJ_T0039492.1 MGP_WSBEiJ_G0020978.1 mouse_genomes_project 14 118738186 118896866 - MGP_WSBEiJ_P0039492 Dock9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0002580.1 MGP_WSBEiJ_G0002478.1 mouse_genomes_project 14 47032873 47038089 + MGP_WSBEiJ_P0002580 TR_V_gene TR_V_gene MGP_WSBEiJ_T0000897.1 MGP_WSBEiJ_G0000835.1 mouse_genomes_project 14 88241726 88242097 + TEC TEC MGP_WSBEiJ_T0097845.1 MGP_WSBEiJ_G0036508.1 mouse_genomes_project 14 43622772 43622858 + Gm22989 snRNA snRNA MGP_WSBEiJ_T0099092.1 MGP_WSBEiJ_G0037755.1 mouse_genomes_project 14 46367147 46367257 - Snord8 snoRNA snoRNA MGP_WSBEiJ_T0038824.1 MGP_WSBEiJ_G0020728.1 mouse_genomes_project 14 52348225 52437412 - MGP_WSBEiJ_P0038824 Micu2 protein_coding protein_coding MGP_WSBEiJ_T0006575.1 MGP_WSBEiJ_G0005438.1 mouse_genomes_project 14 25140476 25162678 + D830044D21Rik lincRNA lincRNA MGP_WSBEiJ_T0099126.1 MGP_WSBEiJ_G0037789.1 mouse_genomes_project 14 101290344 101290478 + Gm24280 snoRNA snoRNA MGP_WSBEiJ_T0038288.1 MGP_WSBEiJ_G0020571.1 mouse_genomes_project 14 44628546 44631450 + MGP_WSBEiJ_P0038288 protein_coding protein_coding MGP_WSBEiJ_T0097861.1 MGP_WSBEiJ_G0036524.1 mouse_genomes_project 14 81867551 81867691 + Gm25115 snRNA snRNA MGP_WSBEiJ_T0003473.1 MGP_WSBEiJ_G0003162.1 mouse_genomes_project 14 48273080 48332315 - Gm42877 antisense antisense MGP_WSBEiJ_T0003474.1 MGP_WSBEiJ_G0003162.1 mouse_genomes_project 14 48310355 48332375 - Gm42877 antisense antisense MGP_WSBEiJ_T0016842.1 MGP_WSBEiJ_G0014708.1 mouse_genomes_project 14 120176788 120191446 + 4930594M22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016843.1 MGP_WSBEiJ_G0014708.1 mouse_genomes_project 14 120176825 120193198 + 4930594M22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016844.1 MGP_WSBEiJ_G0014708.1 mouse_genomes_project 14 120176833 120201225 + 4930594M22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0037471.1 MGP_WSBEiJ_G0020331.1 mouse_genomes_project 14 8881197 8951682 + MGP_WSBEiJ_P0037471 Top2b protein_coding protein_coding MGP_WSBEiJ_T0037472.1 MGP_WSBEiJ_G0020331.1 mouse_genomes_project 14 8908173 8912167 + Top2b protein_coding retained_intron MGP_WSBEiJ_T0037473.1 MGP_WSBEiJ_G0020331.1 mouse_genomes_project 14 8930799 8937929 + MGP_WSBEiJ_P0037473 Top2b protein_coding protein_coding MGP_WSBEiJ_T0037474.1 MGP_WSBEiJ_G0020331.1 mouse_genomes_project 14 8932911 8937600 + MGP_WSBEiJ_P0037474 Top2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037475.1 MGP_WSBEiJ_G0020331.1 mouse_genomes_project 14 8934553 8946336 + MGP_WSBEiJ_P0037475 Top2b protein_coding protein_coding MGP_WSBEiJ_T0037476.1 MGP_WSBEiJ_G0020331.1 mouse_genomes_project 14 8944186 8949399 + Top2b protein_coding retained_intron MGP_WSBEiJ_T0037518.1 MGP_WSBEiJ_G0020343.1 mouse_genomes_project 14 12817529 12825058 - MGP_WSBEiJ_P0037518 Saysd1 protein_coding protein_coding MGP_WSBEiJ_T0038323.1 MGP_WSBEiJ_G0020585.1 mouse_genomes_project 14 44993361 44993906 - MGP_WSBEiJ_P0038323 Rnase12 protein_coding protein_coding MGP_WSBEiJ_T0097879.1 MGP_WSBEiJ_G0036542.1 mouse_genomes_project 14 115636022 115636122 + Gm23302 snRNA snRNA MGP_WSBEiJ_T0039243.1 MGP_WSBEiJ_G0020881.1 mouse_genomes_project 14 70195041 70255493 + MGP_WSBEiJ_P0039243 Zc3h13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039244.1 MGP_WSBEiJ_G0020881.1 mouse_genomes_project 14 70195146 70256155 + MGP_WSBEiJ_P0039244 Zc3h13 protein_coding protein_coding MGP_WSBEiJ_T0012715.1 MGP_WSBEiJ_G0010845.1 mouse_genomes_project 14 46676176 46676744 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038033.1 MGP_WSBEiJ_G0020475.1 mouse_genomes_project 14 27276830 27282924 + MGP_WSBEiJ_P0038033 Gdf2 protein_coding protein_coding MGP_WSBEiJ_T0039438.1 MGP_WSBEiJ_G0020955.1 mouse_genomes_project 14 107342064 107348582 - MGP_WSBEiJ_P0039438 Slitrk6 protein_coding protein_coding MGP_WSBEiJ_T0037917.1 MGP_WSBEiJ_G0020446.1 mouse_genomes_project 14 24733368 24792641 - MGP_WSBEiJ_P0037917 Colq protein_coding protein_coding MGP_WSBEiJ_T0037918.1 MGP_WSBEiJ_G0020446.1 mouse_genomes_project 14 24733446 24771251 - MGP_WSBEiJ_P0037918 Colq protein_coding protein_coding MGP_WSBEiJ_T0037920.1 MGP_WSBEiJ_G0020446.1 mouse_genomes_project 14 24766024 24809268 - MGP_WSBEiJ_P0037920 Colq protein_coding protein_coding MGP_WSBEiJ_T0037921.1 MGP_WSBEiJ_G0020446.1 mouse_genomes_project 14 24793640 24809244 - Colq protein_coding processed_transcript MGP_WSBEiJ_T0037922.1 MGP_WSBEiJ_G0020446.1 mouse_genomes_project 14 24804699 24809233 - Colq protein_coding processed_transcript MGP_WSBEiJ_T0003445.1 MGP_WSBEiJ_G0003141.1 mouse_genomes_project 14 13144640 13145212 + 7330404K18Rik antisense antisense MGP_WSBEiJ_T0038701.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49904676 49911963 - MGP_WSBEiJ_P0038701 Tm9sf1 protein_coding protein_coding MGP_WSBEiJ_T0038702.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49904676 49912518 - MGP_WSBEiJ_P0038702 Tm9sf1 protein_coding protein_coding MGP_WSBEiJ_T0038703.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49904679 49912027 - MGP_WSBEiJ_P0038703 Tm9sf1 protein_coding protein_coding MGP_WSBEiJ_T0038704.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49904723 49912066 - MGP_WSBEiJ_P0038704 Tm9sf1 protein_coding protein_coding MGP_WSBEiJ_T0038705.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49904727 49912073 - MGP_WSBEiJ_P0038705 Tm9sf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038706.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49904771 49912052 - MGP_WSBEiJ_P0038706 Tm9sf1 protein_coding protein_coding MGP_WSBEiJ_T0038707.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49906544 49912235 - MGP_WSBEiJ_P0038707 Tm9sf1 protein_coding protein_coding MGP_WSBEiJ_T0038708.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49907012 49909772 - Tm9sf1 protein_coding processed_transcript MGP_WSBEiJ_T0038709.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49908807 49912083 - Tm9sf1 protein_coding retained_intron MGP_WSBEiJ_T0038710.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49909096 49912272 - Tm9sf1 protein_coding processed_transcript MGP_WSBEiJ_T0038711.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49909155 49910311 - Tm9sf1 protein_coding retained_intron MGP_WSBEiJ_T0038712.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49910129 49912483 - MGP_WSBEiJ_P0038712 Tm9sf1 protein_coding protein_coding MGP_WSBEiJ_T0038713.1 MGP_WSBEiJ_G0020673.1 mouse_genomes_project 14 49911295 49912045 - MGP_WSBEiJ_P0038713 Tm9sf1 protein_coding protein_coding MGP_WSBEiJ_T0038963.1 MGP_WSBEiJ_G0020785.1 mouse_genomes_project 14 59380032 59539377 + MGP_WSBEiJ_P0038963 Kif13b protein_coding protein_coding MGP_WSBEiJ_T0038964.1 MGP_WSBEiJ_G0020785.1 mouse_genomes_project 14 59380103 59542701 + MGP_WSBEiJ_P0038964 Kif13b protein_coding unknown_likely_coding MGP_WSBEiJ_T0009863.1 MGP_WSBEiJ_G0008020.1 mouse_genomes_project 14 111952234 111952316 + Mir19a miRNA miRNA MGP_WSBEiJ_T0100224.1 MGP_WSBEiJ_G0038774.1 mouse_genomes_project 14 64306989 64389289 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0039177.1 MGP_WSBEiJ_G0020866.1 mouse_genomes_project 14 67856640 67876677 - MGP_WSBEiJ_P0039177 Cysltr2 protein_coding protein_coding MGP_WSBEiJ_T0039178.1 MGP_WSBEiJ_G0020866.1 mouse_genomes_project 14 67856640 67876677 - MGP_WSBEiJ_P0039178 Cysltr2 protein_coding protein_coding MGP_WSBEiJ_T0038321.1 MGP_WSBEiJ_G0020583.1 mouse_genomes_project 14 44974052 44977463 - MGP_WSBEiJ_P0038321 Rnase9 protein_coding protein_coding MGP_WSBEiJ_T0037537.1 MGP_WSBEiJ_G0020352.1 mouse_genomes_project 14 13199563 13224975 - MGP_WSBEiJ_P0037537 Anxa7 protein_coding protein_coding MGP_WSBEiJ_T0037538.1 MGP_WSBEiJ_G0020352.1 mouse_genomes_project 14 13199563 13224975 - MGP_WSBEiJ_P0037538 Anxa7 protein_coding protein_coding MGP_WSBEiJ_T0037539.1 MGP_WSBEiJ_G0020352.1 mouse_genomes_project 14 13199580 13224953 - MGP_WSBEiJ_P0037539 Anxa7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038758.1 MGP_WSBEiJ_G0020700.1 mouse_genomes_project 14 50434042 50480742 - MGP_WSBEiJ_P0038758 protein_coding protein_coding MGP_WSBEiJ_T0038287.1 MGP_WSBEiJ_G0020570.1 mouse_genomes_project 14 44545483 44546656 + MGP_WSBEiJ_P0038287 Olfr745 protein_coding protein_coding MGP_WSBEiJ_T0038455.1 MGP_WSBEiJ_G0020613.1 mouse_genomes_project 14 46550772 46576513 - MGP_WSBEiJ_P0038455 protein_coding protein_coding MGP_WSBEiJ_T0038457.1 MGP_WSBEiJ_G0020613.1 mouse_genomes_project 14 46551034 46579883 - MGP_WSBEiJ_P0038457 protein_coding protein_coding MGP_WSBEiJ_T0003472.1 MGP_WSBEiJ_G0003161.1 mouse_genomes_project 14 48126824 48154798 - antisense antisense MGP_WSBEiJ_T0039019.1 MGP_WSBEiJ_G0020806.1 mouse_genomes_project 14 61092651 61107050 + MGP_WSBEiJ_P0039019 Trim35 protein_coding protein_coding MGP_WSBEiJ_T0039020.1 MGP_WSBEiJ_G0020806.1 mouse_genomes_project 14 61092710 61103923 + MGP_WSBEiJ_P0039020 Trim35 protein_coding protein_coding MGP_WSBEiJ_T0038263.1 MGP_WSBEiJ_G0020551.1 mouse_genomes_project 14 43722438 43730108 - MGP_WSBEiJ_P0038263 Olfr722 protein_coding protein_coding MGP_WSBEiJ_T0038454.1 MGP_WSBEiJ_G0020612.1 mouse_genomes_project 14 46530478 46531420 - MGP_WSBEiJ_P0038454 Olfr1512 protein_coding protein_coding MGP_WSBEiJ_T0003500.1 MGP_WSBEiJ_G0003183.1 mouse_genomes_project 14 64261282 64264645 - Gm27221 antisense antisense MGP_WSBEiJ_T0002658.1 MGP_WSBEiJ_G0002542.1 mouse_genomes_project 14 47416380 47416647 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0100014.1 MGP_WSBEiJ_G0038652.1 mouse_genomes_project 14 41952657 41982245 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100015.1 MGP_WSBEiJ_G0038652.1 mouse_genomes_project 14 41980971 41982038 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0012741.1 MGP_WSBEiJ_G0010871.1 mouse_genomes_project 14 92154202 92155002 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009819.1 MGP_WSBEiJ_G0007976.1 mouse_genomes_project 14 16977672 16977726 + Mir7210 miRNA miRNA MGP_WSBEiJ_T0012691.1 MGP_WSBEiJ_G0010821.1 mouse_genomes_project 14 11394184 11395354 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039534.1 MGP_WSBEiJ_G0020992.1 mouse_genomes_project 14 120538997 120869740 - MGP_WSBEiJ_P0039534 Nalcn protein_coding protein_coding MGP_WSBEiJ_T0038931.1 MGP_WSBEiJ_G0020771.1 mouse_genomes_project 14 57875011 57923765 - MGP_WSBEiJ_P0038931 Gata4 protein_coding protein_coding MGP_WSBEiJ_T0038932.1 MGP_WSBEiJ_G0020771.1 mouse_genomes_project 14 57875015 57923771 - MGP_WSBEiJ_P0038932 Gata4 protein_coding protein_coding MGP_WSBEiJ_T0038933.1 MGP_WSBEiJ_G0020771.1 mouse_genomes_project 14 57919601 57951151 - MGP_WSBEiJ_P0038933 Gata4 protein_coding protein_coding MGP_WSBEiJ_T0038934.1 MGP_WSBEiJ_G0020771.1 mouse_genomes_project 14 57919614 57950569 - MGP_WSBEiJ_P0038934 Gata4 protein_coding protein_coding MGP_WSBEiJ_T0038935.1 MGP_WSBEiJ_G0020771.1 mouse_genomes_project 14 57919614 57950569 - MGP_WSBEiJ_P0038935 Gata4 protein_coding protein_coding MGP_WSBEiJ_T0039373.1 MGP_WSBEiJ_G0020935.1 mouse_genomes_project 14 97854885 97900127 + MGP_WSBEiJ_P0039373 Uchl3 protein_coding protein_coding MGP_WSBEiJ_T0002463.1 MGP_WSBEiJ_G0002375.1 mouse_genomes_project 14 48363772 48363838 + MGP_WSBEiJ_P0002463 Traj53 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038673.1 MGP_WSBEiJ_G0020669.1 mouse_genomes_project 14 49859152 49871080 + MGP_WSBEiJ_P0038673 Rnf31 protein_coding protein_coding MGP_WSBEiJ_T0038674.1 MGP_WSBEiJ_G0020669.1 mouse_genomes_project 14 49859188 49865102 + MGP_WSBEiJ_P0038674 Rnf31 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038675.1 MGP_WSBEiJ_G0020669.1 mouse_genomes_project 14 49859719 49871051 + MGP_WSBEiJ_P0038675 Rnf31 protein_coding protein_coding MGP_WSBEiJ_T0038676.1 MGP_WSBEiJ_G0020669.1 mouse_genomes_project 14 49859911 49860394 + Rnf31 protein_coding retained_intron MGP_WSBEiJ_T0038677.1 MGP_WSBEiJ_G0020669.1 mouse_genomes_project 14 49865806 49866372 + Rnf31 protein_coding retained_intron MGP_WSBEiJ_T0009865.1 MGP_WSBEiJ_G0008022.1 mouse_genomes_project 14 111952539 111952626 + Mir19b-1 miRNA miRNA MGP_WSBEiJ_T0006567.1 MGP_WSBEiJ_G0005435.1 mouse_genomes_project 14 19378064 19397940 + 4933413J09Rik lincRNA lincRNA MGP_WSBEiJ_T0006568.1 MGP_WSBEiJ_G0005435.1 mouse_genomes_project 14 19379037 19430731 + 4933413J09Rik lincRNA lincRNA MGP_WSBEiJ_T0006569.1 MGP_WSBEiJ_G0005435.1 mouse_genomes_project 14 19379070 19398382 + 4933413J09Rik lincRNA lincRNA MGP_WSBEiJ_T0006570.1 MGP_WSBEiJ_G0005435.1 mouse_genomes_project 14 19384121 19399500 + 4933413J09Rik lincRNA lincRNA MGP_WSBEiJ_T0006571.1 MGP_WSBEiJ_G0005435.1 mouse_genomes_project 14 19385878 19426917 + 4933413J09Rik lincRNA lincRNA MGP_WSBEiJ_T0006572.1 MGP_WSBEiJ_G0005435.1 mouse_genomes_project 14 19385878 19399398 + 4933413J09Rik lincRNA lincRNA MGP_WSBEiJ_T0037593.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529450 14537543 - MGP_WSBEiJ_P0037593 Dusp13 protein_coding protein_coding MGP_WSBEiJ_T0037594.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529451 14538945 - MGP_WSBEiJ_P0037594 Dusp13 protein_coding protein_coding MGP_WSBEiJ_T0037595.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529451 14536468 - MGP_WSBEiJ_P0037595 Dusp13 protein_coding protein_coding MGP_WSBEiJ_T0037596.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529451 14537572 - MGP_WSBEiJ_P0037596 Dusp13 protein_coding protein_coding MGP_WSBEiJ_T0037597.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529451 14544710 - MGP_WSBEiJ_P0037597 Dusp13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037598.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529451 14537586 - MGP_WSBEiJ_P0037598 Dusp13 protein_coding protein_coding MGP_WSBEiJ_T0037599.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529451 14544712 - MGP_WSBEiJ_P0037599 Dusp13 protein_coding protein_coding MGP_WSBEiJ_T0037600.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529454 14544732 - MGP_WSBEiJ_P0037600 Dusp13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037601.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529645 14544710 - MGP_WSBEiJ_P0037601 Dusp13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037602.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14529705 14544716 - MGP_WSBEiJ_P0037602 Dusp13 protein_coding protein_coding MGP_WSBEiJ_T0037603.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14536201 14544716 - Dusp13 protein_coding processed_transcript MGP_WSBEiJ_T0037604.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14536210 14542575 - MGP_WSBEiJ_P0037604 Dusp13 protein_coding protein_coding MGP_WSBEiJ_T0037605.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14539577 14544728 - MGP_WSBEiJ_P0037605 Dusp13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037606.1 MGP_WSBEiJ_G0020370.1 mouse_genomes_project 14 14540939 14547271 - Dusp13 protein_coding processed_transcript MGP_WSBEiJ_T0038930.1 MGP_WSBEiJ_G0020770.1 mouse_genomes_project 14 57856044 57869915 - MGP_WSBEiJ_P0038930 Neil2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099089.1 MGP_WSBEiJ_G0037752.1 mouse_genomes_project 14 30684202 30684335 + Gm22469 snoRNA snoRNA MGP_WSBEiJ_T0038074.1 MGP_WSBEiJ_G0020495.1 mouse_genomes_project 14 28192537 28973534 + MGP_WSBEiJ_P0038074 Grid1 protein_coding protein_coding MGP_WSBEiJ_T0038075.1 MGP_WSBEiJ_G0020495.1 mouse_genomes_project 14 28959513 28971275 + Grid1 protein_coding processed_transcript MGP_WSBEiJ_T0038353.1 MGP_WSBEiJ_G0020596.1 mouse_genomes_project 14 46035618 46043834 - MGP_WSBEiJ_P0038353 Ndrg2 protein_coding protein_coding MGP_WSBEiJ_T0038354.1 MGP_WSBEiJ_G0020596.1 mouse_genomes_project 14 46035623 46044408 - MGP_WSBEiJ_P0038354 Ndrg2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038053.1 MGP_WSBEiJ_G0020487.1 mouse_genomes_project 14 27705839 27709422 - MGP_WSBEiJ_P0038053 Fam25c protein_coding protein_coding MGP_WSBEiJ_T0012710.1 MGP_WSBEiJ_G0010840.1 mouse_genomes_project 14 39476262 39476696 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039152.1 MGP_WSBEiJ_G0020857.1 mouse_genomes_project 14 65341458 65358947 - MGP_WSBEiJ_P0039152 Fam160b2 protein_coding protein_coding MGP_WSBEiJ_T0002665.1 MGP_WSBEiJ_G0002549.1 mouse_genomes_project 14 48200170 48200473 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0038955.1 MGP_WSBEiJ_G0020781.1 mouse_genomes_project 14 58794759 58804739 - MGP_WSBEiJ_P0038955 Prss55 protein_coding protein_coding MGP_WSBEiJ_T0038956.1 MGP_WSBEiJ_G0020781.1 mouse_genomes_project 14 58794766 58804696 - MGP_WSBEiJ_P0038956 Prss55 protein_coding protein_coding MGP_WSBEiJ_T0038957.1 MGP_WSBEiJ_G0020781.1 mouse_genomes_project 14 58798654 58809414 - Prss55 protein_coding processed_transcript MGP_WSBEiJ_T0038789.1 MGP_WSBEiJ_G0020719.1 mouse_genomes_project 14 51829998 51928243 + MGP_WSBEiJ_P0038789 Ift88 protein_coding protein_coding MGP_WSBEiJ_T0038790.1 MGP_WSBEiJ_G0020719.1 mouse_genomes_project 14 51830016 51846819 + MGP_WSBEiJ_P0038790 Ift88 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038791.1 MGP_WSBEiJ_G0020719.1 mouse_genomes_project 14 51830042 51928243 + Ift88 protein_coding retained_intron MGP_WSBEiJ_T0038792.1 MGP_WSBEiJ_G0020719.1 mouse_genomes_project 14 51851481 51886841 + MGP_WSBEiJ_P0038792 Ift88 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038793.1 MGP_WSBEiJ_G0020719.1 mouse_genomes_project 14 51888517 51896378 + Ift88 protein_coding retained_intron MGP_WSBEiJ_T0002553.1 MGP_WSBEiJ_G0002456.1 mouse_genomes_project 14 46787957 46788402 + MGP_WSBEiJ_P0002553 Trav6-1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0097872.1 MGP_WSBEiJ_G0036535.1 mouse_genomes_project 14 101556350 101556457 + Gm22290 snRNA snRNA MGP_WSBEiJ_T0038358.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125521 46128272 + MGP_WSBEiJ_P0038358 Arhgef40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038359.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125635 46147099 + MGP_WSBEiJ_P0038359 Arhgef40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038360.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125640 46147695 + MGP_WSBEiJ_P0038360 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038361.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125646 46132485 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038362.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125666 46147066 + MGP_WSBEiJ_P0038362 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038363.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125688 46147077 + MGP_WSBEiJ_P0038363 Arhgef40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038364.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125711 46147071 + MGP_WSBEiJ_P0038364 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038365.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125712 46147067 + MGP_WSBEiJ_P0038365 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038366.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125714 46126874 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038367.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125717 46130946 + MGP_WSBEiJ_P0038367 Arhgef40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038368.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125733 46147067 + MGP_WSBEiJ_P0038368 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038369.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125768 46133481 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038370.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46125773 46130598 + MGP_WSBEiJ_P0038370 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038371.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46133592 46135833 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038372.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46135829 46138788 + MGP_WSBEiJ_P0038372 Arhgef40 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038373.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46137007 46137976 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038374.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46139378 46147073 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038375.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46143776 46147067 + MGP_WSBEiJ_P0038375 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038376.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46143804 46145406 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038377.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46143851 46147070 + MGP_WSBEiJ_P0038377 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038378.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46145013 46146464 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038379.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46145524 46146985 + MGP_WSBEiJ_P0038379 Arhgef40 protein_coding protein_coding MGP_WSBEiJ_T0038380.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46145930 46146814 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038381.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46145944 46146756 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0038382.1 MGP_WSBEiJ_G0020599.1 mouse_genomes_project 14 46146031 46146755 + Arhgef40 protein_coding retained_intron MGP_WSBEiJ_T0037938.1 MGP_WSBEiJ_G0020449.1 mouse_genomes_project 14 24926568 25012512 - MGP_WSBEiJ_P0037938 Ankrd28 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037939.1 MGP_WSBEiJ_G0020449.1 mouse_genomes_project 14 24927819 25062990 - MGP_WSBEiJ_P0037939 Ankrd28 protein_coding protein_coding MGP_WSBEiJ_T0038577.1 MGP_WSBEiJ_G0020649.1 mouse_genomes_project 14 49179451 49206218 - MGP_WSBEiJ_P0038577 Myh6 protein_coding protein_coding MGP_WSBEiJ_T0038578.1 MGP_WSBEiJ_G0020649.1 mouse_genomes_project 14 49202382 49206152 - MGP_WSBEiJ_P0038578 Myh6 protein_coding protein_coding MGP_WSBEiJ_T0038579.1 MGP_WSBEiJ_G0020649.1 mouse_genomes_project 14 49202382 49206182 - MGP_WSBEiJ_P0038579 Myh6 protein_coding protein_coding MGP_WSBEiJ_T0038580.1 MGP_WSBEiJ_G0020649.1 mouse_genomes_project 14 49203690 49206504 - MGP_WSBEiJ_P0038580 Myh6 protein_coding protein_coding MGP_WSBEiJ_T0002592.1 MGP_WSBEiJ_G0002488.1 mouse_genomes_project 14 47694942 47695233 + MGP_WSBEiJ_P0002592 TR_V_gene TR_V_gene MGP_WSBEiJ_T0097877.1 MGP_WSBEiJ_G0036540.1 mouse_genomes_project 14 108791790 108791882 - Gm22764 snRNA snRNA MGP_WSBEiJ_T0039506.1 MGP_WSBEiJ_G0020988.1 mouse_genomes_project 14 119746544 119748087 + MGP_WSBEiJ_P0039506 Gm10837 protein_coding protein_coding MGP_WSBEiJ_T0002578.1 MGP_WSBEiJ_G0002476.1 mouse_genomes_project 14 47013884 47014415 + MGP_WSBEiJ_P0002578 TR_V_gene TR_V_gene MGP_WSBEiJ_T0099090.1 MGP_WSBEiJ_G0037753.1 mouse_genomes_project 14 30893771 30893902 - Gm23909 snoRNA snoRNA MGP_WSBEiJ_T0003452.1 MGP_WSBEiJ_G0003144.1 mouse_genomes_project 14 14537609 14542427 + Gm15935 antisense antisense MGP_WSBEiJ_T0003453.1 MGP_WSBEiJ_G0003144.1 mouse_genomes_project 14 14537631 14542722 + Gm15935 antisense antisense MGP_WSBEiJ_T0003454.1 MGP_WSBEiJ_G0003144.1 mouse_genomes_project 14 14537655 14542173 + Gm15935 antisense antisense MGP_WSBEiJ_T0002654.1 MGP_WSBEiJ_G0002538.1 mouse_genomes_project 14 47002221 47002512 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0038387.1 MGP_WSBEiJ_G0020603.1 mouse_genomes_project 14 46218814 46254368 - MGP_WSBEiJ_P0038387 Hnrnpc protein_coding unknown_likely_coding MGP_WSBEiJ_T0038388.1 MGP_WSBEiJ_G0020603.1 mouse_genomes_project 14 46218820 46230515 - MGP_WSBEiJ_P0038388 Hnrnpc protein_coding protein_coding MGP_WSBEiJ_T0038389.1 MGP_WSBEiJ_G0020603.1 mouse_genomes_project 14 46218820 46254378 - MGP_WSBEiJ_P0038389 Hnrnpc protein_coding protein_coding MGP_WSBEiJ_T0002574.1 MGP_WSBEiJ_G0002473.1 mouse_genomes_project 14 46937615 46938115 + MGP_WSBEiJ_P0002574 TR_V_gene TR_V_gene MGP_WSBEiJ_T0012738.1 MGP_WSBEiJ_G0010868.1 mouse_genomes_project 14 83902287 83903271 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037678.1 MGP_WSBEiJ_G0020386.1 mouse_genomes_project 14 18801589 18816671 - MGP_WSBEiJ_P0037678 Gm9780 protein_coding protein_coding MGP_WSBEiJ_T0037682.1 MGP_WSBEiJ_G0020386.1 mouse_genomes_project 14 18802062 18816047 - MGP_WSBEiJ_P0037682 Gm9780 protein_coding protein_coding MGP_WSBEiJ_T0009846.1 MGP_WSBEiJ_G0008003.1 mouse_genomes_project 14 62129582 62129677 - Gm23178 miRNA miRNA MGP_WSBEiJ_T0006584.1 MGP_WSBEiJ_G0005446.1 mouse_genomes_project 14 40206240 40218982 + E130120K24Rik lincRNA lincRNA MGP_WSBEiJ_T0012708.1 MGP_WSBEiJ_G0010838.1 mouse_genomes_project 14 38799803 38800713 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037778.1 MGP_WSBEiJ_G0020418.1 mouse_genomes_project 14 23640581 23689617 + MGP_WSBEiJ_P0037778 Dcp1a protein_coding protein_coding MGP_WSBEiJ_T0009837.1 MGP_WSBEiJ_G0007994.1 mouse_genomes_project 14 54746596 54746706 - Mir719 miRNA miRNA MGP_WSBEiJ_T0002457.1 MGP_WSBEiJ_G0002371.1 mouse_genomes_project 14 48357302 48357364 + MGP_WSBEiJ_P0002457 Traj59 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002458.1 MGP_WSBEiJ_G0002371.1 mouse_genomes_project 14 48357302 48357366 + Traj59 TR_J_gene processed_transcript MGP_WSBEiJ_T0038285.1 MGP_WSBEiJ_G0020568.1 mouse_genomes_project 14 44322584 44323210 + MGP_WSBEiJ_P0038285 protein_coding protein_coding MGP_WSBEiJ_T0039216.1 MGP_WSBEiJ_G0020874.1 mouse_genomes_project 14 69520136 69591193 + MGP_WSBEiJ_P0039216 Htr2a protein_coding protein_coding MGP_WSBEiJ_T0000893.1 MGP_WSBEiJ_G0000831.1 mouse_genomes_project 14 64311621 64313937 - TEC TEC MGP_WSBEiJ_T0039089.1 MGP_WSBEiJ_G0020833.1 mouse_genomes_project 14 64259972 64280320 + MGP_WSBEiJ_P0039089 protein_coding protein_coding MGP_WSBEiJ_T0039401.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99369515 99417828 - MGP_WSBEiJ_P0039401 protein_coding protein_coding MGP_WSBEiJ_T0039402.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99369515 99625042 - MGP_WSBEiJ_P0039402 protein_coding protein_coding MGP_WSBEiJ_T0039403.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99369515 99624666 - MGP_WSBEiJ_P0039403 protein_coding protein_coding MGP_WSBEiJ_T0039404.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99370224 99463172 - MGP_WSBEiJ_P0039404 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039405.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99370237 99371502 - protein_coding processed_transcript MGP_WSBEiJ_T0039406.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99395312 99414831 - protein_coding retained_intron MGP_WSBEiJ_T0039407.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99417877 99458515 - MGP_WSBEiJ_P0039407 protein_coding protein_coding MGP_WSBEiJ_T0039408.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99463264 99624765 - MGP_WSBEiJ_P0039408 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039409.1 MGP_WSBEiJ_G0020942.1 mouse_genomes_project 14 99589409 99625056 - protein_coding retained_intron MGP_WSBEiJ_T0039107.1 MGP_WSBEiJ_G0020841.1 mouse_genomes_project 14 64831131 64870402 + MGP_WSBEiJ_P0039107 Bin3 protein_coding protein_coding MGP_WSBEiJ_T0039158.1 MGP_WSBEiJ_G0020861.1 mouse_genomes_project 14 65414271 65525794 - MGP_WSBEiJ_P0039158 Xpo7 protein_coding protein_coding MGP_WSBEiJ_T0039159.1 MGP_WSBEiJ_G0020861.1 mouse_genomes_project 14 65414271 65525794 - MGP_WSBEiJ_P0039159 Xpo7 protein_coding protein_coding MGP_WSBEiJ_T0039076.1 MGP_WSBEiJ_G0020825.1 mouse_genomes_project 14 63931218 63943340 + MGP_WSBEiJ_P0039076 Stc1 protein_coding protein_coding MGP_WSBEiJ_T0037397.1 MGP_WSBEiJ_G0020306.1 mouse_genomes_project 14 541964 575676 - MGP_WSBEiJ_P0037397 Acox2 protein_coding protein_coding MGP_WSBEiJ_T0037398.1 MGP_WSBEiJ_G0020306.1 mouse_genomes_project 14 541964 576197 - MGP_WSBEiJ_P0037398 Acox2 protein_coding protein_coding MGP_WSBEiJ_T0037399.1 MGP_WSBEiJ_G0020306.1 mouse_genomes_project 14 556323 563241 - Acox2 protein_coding processed_transcript MGP_WSBEiJ_T0037400.1 MGP_WSBEiJ_G0020306.1 mouse_genomes_project 14 560429 563268 - Acox2 protein_coding retained_intron MGP_WSBEiJ_T0037401.1 MGP_WSBEiJ_G0020306.1 mouse_genomes_project 14 564713 570366 - Acox2 protein_coding retained_intron MGP_WSBEiJ_T0037402.1 MGP_WSBEiJ_G0020306.1 mouse_genomes_project 14 570385 574715 - MGP_WSBEiJ_P0037402 Acox2 protein_coding protein_coding MGP_WSBEiJ_T0037403.1 MGP_WSBEiJ_G0020306.1 mouse_genomes_project 14 572037 574998 - Acox2 protein_coding processed_transcript MGP_WSBEiJ_T0037404.1 MGP_WSBEiJ_G0020306.1 mouse_genomes_project 14 572766 573778 - Acox2 protein_coding retained_intron MGP_WSBEiJ_T0006581.1 MGP_WSBEiJ_G0005443.1 mouse_genomes_project 14 39282658 39284532 - A530076I17Rik lincRNA lincRNA MGP_WSBEiJ_T0003508.1 MGP_WSBEiJ_G0003187.1 mouse_genomes_project 14 70781117 70782696 - Gm4285 antisense antisense MGP_WSBEiJ_T0002468.1 MGP_WSBEiJ_G0002379.1 mouse_genomes_project 14 48370860 48370921 + MGP_WSBEiJ_P0002468 Traj48 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002469.1 MGP_WSBEiJ_G0002379.1 mouse_genomes_project 14 48370861 48370921 + Traj48 TR_J_gene processed_transcript MGP_WSBEiJ_T0003466.1 MGP_WSBEiJ_G0003155.1 mouse_genomes_project 14 32009753 32021630 + Gm20641 antisense antisense MGP_WSBEiJ_T0012740.1 MGP_WSBEiJ_G0010870.1 mouse_genomes_project 14 91294934 91296235 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039246.1 MGP_WSBEiJ_G0020883.1 mouse_genomes_project 14 70505598 70514751 - MGP_WSBEiJ_P0039246 Spert protein_coding protein_coding MGP_WSBEiJ_T0039247.1 MGP_WSBEiJ_G0020883.1 mouse_genomes_project 14 70505598 70515883 - MGP_WSBEiJ_P0039247 Spert protein_coding protein_coding MGP_WSBEiJ_T0039248.1 MGP_WSBEiJ_G0020883.1 mouse_genomes_project 14 70505598 70515883 - MGP_WSBEiJ_P0039248 Spert protein_coding protein_coding MGP_WSBEiJ_T0039249.1 MGP_WSBEiJ_G0020883.1 mouse_genomes_project 14 70505598 70514751 - MGP_WSBEiJ_P0039249 Spert protein_coding protein_coding MGP_WSBEiJ_T0038102.1 MGP_WSBEiJ_G0020508.1 mouse_genomes_project 14 34535902 34556063 - MGP_WSBEiJ_P0038102 Fam213a protein_coding protein_coding MGP_WSBEiJ_T0038103.1 MGP_WSBEiJ_G0020508.1 mouse_genomes_project 14 34536698 34546801 - MGP_WSBEiJ_P0038103 Fam213a protein_coding protein_coding MGP_WSBEiJ_T0038104.1 MGP_WSBEiJ_G0020508.1 mouse_genomes_project 14 34539908 34547247 - MGP_WSBEiJ_P0038104 Fam213a protein_coding protein_coding MGP_WSBEiJ_T0038105.1 MGP_WSBEiJ_G0020508.1 mouse_genomes_project 14 34541019 34545373 - Fam213a protein_coding retained_intron MGP_WSBEiJ_T0038106.1 MGP_WSBEiJ_G0020508.1 mouse_genomes_project 14 34541057 34549242 - MGP_WSBEiJ_P0038106 Fam213a protein_coding protein_coding MGP_WSBEiJ_T0038107.1 MGP_WSBEiJ_G0020508.1 mouse_genomes_project 14 34541099 34556031 - MGP_WSBEiJ_P0038107 Fam213a protein_coding protein_coding MGP_WSBEiJ_T0038108.1 MGP_WSBEiJ_G0020508.1 mouse_genomes_project 14 34546308 34549186 - MGP_WSBEiJ_P0038108 Fam213a protein_coding protein_coding MGP_WSBEiJ_T0039421.1 MGP_WSBEiJ_G0020948.1 mouse_genomes_project 14 101418910 101442603 - MGP_WSBEiJ_P0039421 Rbm26 protein_coding protein_coding MGP_WSBEiJ_T0039422.1 MGP_WSBEiJ_G0020948.1 mouse_genomes_project 14 101427106 101490438 - MGP_WSBEiJ_P0039422 Rbm26 protein_coding protein_coding MGP_WSBEiJ_T0039423.1 MGP_WSBEiJ_G0020948.1 mouse_genomes_project 14 101427127 101490901 - MGP_WSBEiJ_P0039423 Rbm26 protein_coding protein_coding MGP_WSBEiJ_T0039424.1 MGP_WSBEiJ_G0020948.1 mouse_genomes_project 14 101427204 101490905 - MGP_WSBEiJ_P0039424 Rbm26 protein_coding protein_coding MGP_WSBEiJ_T0039425.1 MGP_WSBEiJ_G0020948.1 mouse_genomes_project 14 101428245 101490842 - MGP_WSBEiJ_P0039425 Rbm26 protein_coding protein_coding MGP_WSBEiJ_T0097875.1 MGP_WSBEiJ_G0036538.1 mouse_genomes_project 14 106995129 106995236 - Gm23242 snRNA snRNA MGP_WSBEiJ_T0038280.1 MGP_WSBEiJ_G0020564.1 mouse_genomes_project 14 44207632 44214183 + MGP_WSBEiJ_P0038280 Tlr11 protein_coding protein_coding MGP_WSBEiJ_T0038281.1 MGP_WSBEiJ_G0020564.1 mouse_genomes_project 14 44211021 44214014 + MGP_WSBEiJ_P0038281 Tlr11 protein_coding protein_coding MGP_WSBEiJ_T0038627.1 MGP_WSBEiJ_G0020663.1 mouse_genomes_project 14 49823301 49823766 - MGP_WSBEiJ_P0038627 A730061H03Rik protein_coding protein_coding MGP_WSBEiJ_T0006629.1 MGP_WSBEiJ_G0005478.1 mouse_genomes_project 14 102732136 102800431 - 1700128A07Rik lincRNA lincRNA MGP_WSBEiJ_T0006630.1 MGP_WSBEiJ_G0005478.1 mouse_genomes_project 14 102757034 102800403 - 1700128A07Rik lincRNA lincRNA MGP_WSBEiJ_T0039391.1 MGP_WSBEiJ_G0020938.1 mouse_genomes_project 14 99229968 99236053 - MGP_WSBEiJ_P0039391 Kctd12 protein_coding protein_coding MGP_WSBEiJ_T0039392.1 MGP_WSBEiJ_G0020938.1 mouse_genomes_project 14 99230936 99234967 - Kctd12 protein_coding processed_transcript MGP_WSBEiJ_T0038746.1 MGP_WSBEiJ_G0020690.1 mouse_genomes_project 14 50148726 50154064 - MGP_WSBEiJ_P0038746 Cbln3 protein_coding protein_coding MGP_WSBEiJ_T0038747.1 MGP_WSBEiJ_G0020690.1 mouse_genomes_project 14 50151867 50154040 - MGP_WSBEiJ_P0038747 Cbln3 protein_coding protein_coding MGP_WSBEiJ_T0039525.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120182713 120248643 - MGP_WSBEiJ_P0039525 Tmtc4 protein_coding protein_coding MGP_WSBEiJ_T0039526.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120182720 120248577 - MGP_WSBEiJ_P0039526 Tmtc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039527.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120183487 120248502 - MGP_WSBEiJ_P0039527 Tmtc4 protein_coding protein_coding MGP_WSBEiJ_T0039528.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120183516 120248502 - MGP_WSBEiJ_P0039528 Tmtc4 protein_coding protein_coding MGP_WSBEiJ_T0039529.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120183662 120199787 - Tmtc4 protein_coding processed_transcript MGP_WSBEiJ_T0039530.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120188561 120192889 - Tmtc4 protein_coding retained_intron MGP_WSBEiJ_T0039531.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120196240 120248600 - Tmtc4 protein_coding retained_intron MGP_WSBEiJ_T0039532.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120208500 120248635 - MGP_WSBEiJ_P0039532 Tmtc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039533.1 MGP_WSBEiJ_G0020991.1 mouse_genomes_project 14 120237802 120248529 - Tmtc4 protein_coding processed_transcript MGP_WSBEiJ_T0038732.1 MGP_WSBEiJ_G0020682.1 mouse_genomes_project 14 50016817 50026768 + MGP_WSBEiJ_P0038732 Nop9 protein_coding protein_coding MGP_WSBEiJ_T0009849.1 MGP_WSBEiJ_G0008006.1 mouse_genomes_project 14 65046960 65047046 - Gm44340 miRNA miRNA MGP_WSBEiJ_T0006638.1 MGP_WSBEiJ_G0005486.1 mouse_genomes_project 14 121183296 121210012 + 1700024B18Rik lincRNA lincRNA MGP_WSBEiJ_T0002488.1 MGP_WSBEiJ_G0002398.1 mouse_genomes_project 14 48393268 48393333 + MGP_WSBEiJ_P0002488 Traj28 TR_J_gene TR_J_gene MGP_WSBEiJ_T0097287.1 MGP_WSBEiJ_G0035964.1 mouse_genomes_project 14 51095240 51096377 - C030013D06Rik sense_intronic sense_intronic MGP_WSBEiJ_T0039074.1 MGP_WSBEiJ_G0020824.1 mouse_genomes_project 14 63507888 63562337 - MGP_WSBEiJ_P0039074 Adam28 protein_coding protein_coding MGP_WSBEiJ_T0039075.1 MGP_WSBEiJ_G0020824.1 mouse_genomes_project 14 63508749 63562337 - MGP_WSBEiJ_P0039075 Adam28 protein_coding protein_coding MGP_WSBEiJ_T0037779.1 MGP_WSBEiJ_G0020419.1 mouse_genomes_project 14 23711774 23712552 + protein_coding processed_transcript MGP_WSBEiJ_T0037780.1 MGP_WSBEiJ_G0020419.1 mouse_genomes_project 14 23711836 23740299 + MGP_WSBEiJ_P0037780 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037781.1 MGP_WSBEiJ_G0020419.1 mouse_genomes_project 14 23712596 23727149 + protein_coding retained_intron MGP_WSBEiJ_T0037782.1 MGP_WSBEiJ_G0020419.1 mouse_genomes_project 14 23712626 23725356 + MGP_WSBEiJ_P0037782 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037783.1 MGP_WSBEiJ_G0020419.1 mouse_genomes_project 14 23735269 23736585 + protein_coding retained_intron MGP_WSBEiJ_T0002446.1 MGP_WSBEiJ_G0002362.1 mouse_genomes_project 14 48423309 48428096 + MGP_WSBEiJ_P0002446 Trac TR_C_gene TR_C_gene MGP_WSBEiJ_T0002447.1 MGP_WSBEiJ_G0002362.1 mouse_genomes_project 14 48423309 48427011 + MGP_WSBEiJ_P0002447 Trac TR_C_gene TR_C_gene MGP_WSBEiJ_T0039083.1 MGP_WSBEiJ_G0020830.1 mouse_genomes_project 14 64201596 64206760 - MGP_WSBEiJ_P0039083 Synb protein_coding protein_coding MGP_WSBEiJ_T0037560.1 MGP_WSBEiJ_G0020359.1 mouse_genomes_project 14 13449795 13456571 + MGP_WSBEiJ_P0037560 Fut11 protein_coding protein_coding MGP_WSBEiJ_T0037520.1 MGP_WSBEiJ_G0020345.1 mouse_genomes_project 14 13011571 13017936 - MGP_WSBEiJ_P0037520 Kcnk16 protein_coding protein_coding MGP_WSBEiJ_T0002659.1 MGP_WSBEiJ_G0002543.1 mouse_genomes_project 14 47762445 47762730 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0039331.1 MGP_WSBEiJ_G0020920.1 mouse_genomes_project 14 82922918 83027056 + MGP_WSBEiJ_P0039331 Tdrd3 protein_coding protein_coding MGP_WSBEiJ_T0039332.1 MGP_WSBEiJ_G0020920.1 mouse_genomes_project 14 82922918 83056447 + MGP_WSBEiJ_P0039332 Tdrd3 protein_coding protein_coding MGP_WSBEiJ_T0039333.1 MGP_WSBEiJ_G0020920.1 mouse_genomes_project 14 82922945 83056461 + MGP_WSBEiJ_P0039333 Tdrd3 protein_coding protein_coding MGP_WSBEiJ_T0039334.1 MGP_WSBEiJ_G0020920.1 mouse_genomes_project 14 82964048 82990959 + MGP_WSBEiJ_P0039334 Tdrd3 protein_coding protein_coding MGP_WSBEiJ_T0039335.1 MGP_WSBEiJ_G0020920.1 mouse_genomes_project 14 82981453 82997747 + MGP_WSBEiJ_P0039335 Tdrd3 protein_coding protein_coding MGP_WSBEiJ_T0037521.1 MGP_WSBEiJ_G0020346.1 mouse_genomes_project 14 13037563 13062586 + MGP_WSBEiJ_P0037521 Nudt13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038498.1 MGP_WSBEiJ_G0020624.1 mouse_genomes_project 14 48637474 48647547 + MGP_WSBEiJ_P0038498 Mmp14 protein_coding protein_coding MGP_WSBEiJ_T0038499.1 MGP_WSBEiJ_G0020624.1 mouse_genomes_project 14 48637485 48642642 + MGP_WSBEiJ_P0038499 Mmp14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038500.1 MGP_WSBEiJ_G0020624.1 mouse_genomes_project 14 48637526 48642614 + Mmp14 protein_coding retained_intron MGP_WSBEiJ_T0038501.1 MGP_WSBEiJ_G0020624.1 mouse_genomes_project 14 48637580 48639128 + Mmp14 protein_coding retained_intron MGP_WSBEiJ_T0038502.1 MGP_WSBEiJ_G0020624.1 mouse_genomes_project 14 48637728 48646966 + MGP_WSBEiJ_P0038502 Mmp14 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038503.1 MGP_WSBEiJ_G0020624.1 mouse_genomes_project 14 48638298 48642325 + MGP_WSBEiJ_P0038503 Mmp14 protein_coding protein_coding MGP_WSBEiJ_T0003464.1 MGP_WSBEiJ_G0003153.1 mouse_genomes_project 14 26679996 26684175 - Gm15512 antisense antisense MGP_WSBEiJ_T0011168.1 MGP_WSBEiJ_G0009325.1 mouse_genomes_project 14 24748957 24749259 - Gm24057 misc_RNA misc_RNA MGP_WSBEiJ_T0012704.1 MGP_WSBEiJ_G0010834.1 mouse_genomes_project 14 26190072 26191082 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012717.1 MGP_WSBEiJ_G0010847.1 mouse_genomes_project 14 48522647 48522973 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038804.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52059034 52169077 - MGP_WSBEiJ_P0038804 Lats2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038807.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52111493 52169097 - MGP_WSBEiJ_P0038807 Lats2 protein_coding protein_coding MGP_WSBEiJ_T0038808.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52112943 52169095 - MGP_WSBEiJ_P0038808 Lats2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038809.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52115181 52169079 - MGP_WSBEiJ_P0038809 Lats2 protein_coding protein_coding MGP_WSBEiJ_T0038810.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52118932 52121353 - MGP_WSBEiJ_P0038810 Lats2 protein_coding protein_coding MGP_WSBEiJ_T0038811.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52125298 52181382 - MGP_WSBEiJ_P0038811 Lats2 protein_coding protein_coding MGP_WSBEiJ_T0038812.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52144475 52157294 - MGP_WSBEiJ_P0038812 Lats2 protein_coding protein_coding MGP_WSBEiJ_T0038813.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52144475 52157294 - MGP_WSBEiJ_P0038813 Lats2 protein_coding protein_coding MGP_WSBEiJ_T0038814.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52157173 52167630 - MGP_WSBEiJ_P0038814 Lats2 protein_coding protein_coding MGP_WSBEiJ_T0038815.1 MGP_WSBEiJ_G0020723.1 mouse_genomes_project 14 52157246 52169552 - Lats2 protein_coding processed_transcript MGP_WSBEiJ_T0038119.1 MGP_WSBEiJ_G0020516.1 mouse_genomes_project 14 38374253 38384898 - MGP_WSBEiJ_P0038119 Ptgdr protein_coding protein_coding MGP_WSBEiJ_T0038880.1 MGP_WSBEiJ_G0020745.1 mouse_genomes_project 14 55311059 55325103 + MGP_WSBEiJ_P0038880 C1qtnf9 protein_coding protein_coding MGP_WSBEiJ_T0039453.1 MGP_WSBEiJ_G0020964.1 mouse_genomes_project 14 115309465 115310194 + MGP_WSBEiJ_P0039453 Gm9376 protein_coding protein_coding MGP_WSBEiJ_T0002489.1 MGP_WSBEiJ_G0002399.1 mouse_genomes_project 14 48393910 48393969 + MGP_WSBEiJ_P0002489 Traj27 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002482.1 MGP_WSBEiJ_G0002392.1 mouse_genomes_project 14 48385675 48385733 + MGP_WSBEiJ_P0002482 Traj34 TR_J_gene TR_J_gene MGP_WSBEiJ_T0012719.1 MGP_WSBEiJ_G0010849.1 mouse_genomes_project 14 49673596 49675593 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038867.1 MGP_WSBEiJ_G0020741.1 mouse_genomes_project 14 54736994 54769654 - MGP_WSBEiJ_P0038867 Nupl1 protein_coding protein_coding MGP_WSBEiJ_T0006555.1 MGP_WSBEiJ_G0005426.1 mouse_genomes_project 14 7964672 7979472 + B230110C06Rik lincRNA lincRNA MGP_WSBEiJ_T0006556.1 MGP_WSBEiJ_G0005426.1 mouse_genomes_project 14 7965233 7978934 + B230110C06Rik lincRNA lincRNA MGP_WSBEiJ_T0037989.1 MGP_WSBEiJ_G0020459.1 mouse_genomes_project 14 25644067 25655984 - MGP_WSBEiJ_P0037989 1700024G13Rik protein_coding protein_coding MGP_WSBEiJ_T0003497.1 MGP_WSBEiJ_G0003180.1 mouse_genomes_project 14 64066519 64075312 - 1700092C10Rik antisense antisense MGP_WSBEiJ_T0012725.1 MGP_WSBEiJ_G0010855.1 mouse_genomes_project 14 53910596 53910891 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002456.1 MGP_WSBEiJ_G0002370.1 mouse_genomes_project 14 48337079 48337138 + MGP_WSBEiJ_P0002456 Trdj2 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038200.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41373837 41466514 + MGP_WSBEiJ_P0038200 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038201.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41374752 41466514 + MGP_WSBEiJ_P0038201 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038202.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41374757 41390615 + MGP_WSBEiJ_P0038202 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038203.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41374835 41466521 + MGP_WSBEiJ_P0038203 Ktn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038204.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390055 41466520 + MGP_WSBEiJ_P0038204 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038205.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038205 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038206.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466250 + MGP_WSBEiJ_P0038206 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038207.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466250 + MGP_WSBEiJ_P0038207 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038208.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038208 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038209.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038209 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038210.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466246 + MGP_WSBEiJ_P0038210 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038211.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038211 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038212.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038212 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038213.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466245 + MGP_WSBEiJ_P0038213 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038214.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038214 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038215.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038215 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038216.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038216 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038217.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466248 + MGP_WSBEiJ_P0038217 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038218.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466241 + MGP_WSBEiJ_P0038218 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038219.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466244 + MGP_WSBEiJ_P0038219 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038220.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41390086 41466236 + MGP_WSBEiJ_P0038220 Ktn1 protein_coding protein_coding MGP_WSBEiJ_T0038221.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41428227 41431961 + Ktn1 protein_coding retained_intron MGP_WSBEiJ_T0038222.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41433177 41444766 + Ktn1 protein_coding retained_intron MGP_WSBEiJ_T0038223.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41443163 41454866 + Ktn1 protein_coding retained_intron MGP_WSBEiJ_T0038224.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41454749 41456225 + Ktn1 protein_coding retained_intron MGP_WSBEiJ_T0038225.1 MGP_WSBEiJ_G0020541.1 mouse_genomes_project 14 41459639 41466518 + Ktn1 protein_coding retained_intron MGP_WSBEiJ_T0009868.1 MGP_WSBEiJ_G0008025.1 mouse_genomes_project 14 115301132 115301235 + Mir6241 miRNA miRNA MGP_WSBEiJ_T0038472.1 MGP_WSBEiJ_G0020618.1 mouse_genomes_project 14 48440938 48459662 - MGP_WSBEiJ_P0038472 Dad1 protein_coding protein_coding MGP_WSBEiJ_T0038473.1 MGP_WSBEiJ_G0020618.1 mouse_genomes_project 14 48445137 48459472 - MGP_WSBEiJ_P0038473 Dad1 protein_coding protein_coding MGP_WSBEiJ_T0006614.1 MGP_WSBEiJ_G0005468.1 mouse_genomes_project 14 59303869 59304652 + Mir124a-1hg lincRNA lincRNA MGP_WSBEiJ_T0006615.1 MGP_WSBEiJ_G0005468.1 mouse_genomes_project 14 59304590 59311728 + Mir124a-1hg lincRNA lincRNA MGP_WSBEiJ_T0006616.1 MGP_WSBEiJ_G0005468.1 mouse_genomes_project 14 59305061 59306994 + Mir124a-1hg lincRNA lincRNA MGP_WSBEiJ_T0006617.1 MGP_WSBEiJ_G0005468.1 mouse_genomes_project 14 59306212 59307209 + Mir124a-1hg lincRNA lincRNA MGP_WSBEiJ_T0003488.1 MGP_WSBEiJ_G0003173.1 mouse_genomes_project 14 55320558 55331227 - Mipepos antisense antisense MGP_WSBEiJ_T0002532.1 MGP_WSBEiJ_G0002440.1 mouse_genomes_project 14 48383364 48383428 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0002505.1 MGP_WSBEiJ_G0002415.1 mouse_genomes_project 14 48412166 48412224 + MGP_WSBEiJ_P0002505 Traj9 TR_J_gene TR_J_gene MGP_WSBEiJ_T0037384.1 MGP_WSBEiJ_G0020299.1 mouse_genomes_project 14 120012 262247 + MGP_WSBEiJ_P0037384 Flnb protein_coding protein_coding MGP_WSBEiJ_T0037385.1 MGP_WSBEiJ_G0020299.1 mouse_genomes_project 14 120207 245993 + MGP_WSBEiJ_P0037385 Flnb protein_coding unknown_likely_coding MGP_WSBEiJ_T0002652.1 MGP_WSBEiJ_G0002536.1 mouse_genomes_project 14 46841694 46842185 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0099122.1 MGP_WSBEiJ_G0037785.1 mouse_genomes_project 14 96671914 96672038 - Gm24345 snoRNA snoRNA MGP_WSBEiJ_T0039437.1 MGP_WSBEiJ_G0020954.1 mouse_genomes_project 14 107138427 107139307 + MGP_WSBEiJ_P0039437 protein_coding protein_coding MGP_WSBEiJ_T0039488.1 MGP_WSBEiJ_G0020976.1 mouse_genomes_project 14 118450667 118548166 - MGP_WSBEiJ_P0039488 Stk24 protein_coding protein_coding MGP_WSBEiJ_T0037421.1 MGP_WSBEiJ_G0020312.1 mouse_genomes_project 14 3925822 4658476 + MGP_WSBEiJ_P0037421 Ptprg protein_coding protein_coding MGP_WSBEiJ_T0037422.1 MGP_WSBEiJ_G0020312.1 mouse_genomes_project 14 3925843 4653751 + MGP_WSBEiJ_P0037422 Ptprg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037423.1 MGP_WSBEiJ_G0020312.1 mouse_genomes_project 14 3925871 4365067 + Ptprg protein_coding retained_intron MGP_WSBEiJ_T0037424.1 MGP_WSBEiJ_G0020312.1 mouse_genomes_project 14 4498918 4529359 + MGP_WSBEiJ_P0037424 Ptprg protein_coding protein_coding MGP_WSBEiJ_T0037425.1 MGP_WSBEiJ_G0020312.1 mouse_genomes_project 14 4602091 4653750 + MGP_WSBEiJ_P0037425 Ptprg protein_coding protein_coding MGP_WSBEiJ_T0037426.1 MGP_WSBEiJ_G0020312.1 mouse_genomes_project 14 4631841 4636426 + Ptprg protein_coding processed_transcript MGP_WSBEiJ_T0097834.1 MGP_WSBEiJ_G0036497.1 mouse_genomes_project 14 14616528 14616673 + Gm23502 snRNA snRNA MGP_WSBEiJ_T0012732.1 MGP_WSBEiJ_G0010862.1 mouse_genomes_project 14 69620495 69636028 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012735.1 MGP_WSBEiJ_G0010865.1 mouse_genomes_project 14 69620497 69636025 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006619.1 MGP_WSBEiJ_G0005470.1 mouse_genomes_project 14 64441002 64456690 + 4930480K23Rik lincRNA lincRNA MGP_WSBEiJ_T0006620.1 MGP_WSBEiJ_G0005470.1 mouse_genomes_project 14 64441052 64472354 + 4930480K23Rik lincRNA lincRNA MGP_WSBEiJ_T0038113.1 MGP_WSBEiJ_G0020511.1 mouse_genomes_project 14 34655027 34674053 + MGP_WSBEiJ_P0038113 Mat1a protein_coding protein_coding MGP_WSBEiJ_T0097836.1 MGP_WSBEiJ_G0036499.1 mouse_genomes_project 14 26967641 26967748 + Gm26228 snRNA snRNA MGP_WSBEiJ_T0038248.1 MGP_WSBEiJ_G0020547.1 mouse_genomes_project 14 42975112 42991943 + MGP_WSBEiJ_P0038248 Naa30 protein_coding protein_coding MGP_WSBEiJ_T0038249.1 MGP_WSBEiJ_G0020547.1 mouse_genomes_project 14 42975439 42995286 + MGP_WSBEiJ_P0038249 Naa30 protein_coding protein_coding MGP_WSBEiJ_T0038250.1 MGP_WSBEiJ_G0020547.1 mouse_genomes_project 14 42980735 42993628 + Naa30 protein_coding retained_intron MGP_WSBEiJ_T0038251.1 MGP_WSBEiJ_G0020547.1 mouse_genomes_project 14 42981356 42992510 + Naa30 protein_coding retained_intron MGP_WSBEiJ_T0038566.1 MGP_WSBEiJ_G0020644.1 mouse_genomes_project 14 49125273 49129958 + MGP_WSBEiJ_P0038566 Pabpn1 protein_coding protein_coding MGP_WSBEiJ_T0038567.1 MGP_WSBEiJ_G0020644.1 mouse_genomes_project 14 49126922 49130947 + MGP_WSBEiJ_P0038567 Pabpn1 protein_coding protein_coding MGP_WSBEiJ_T0038568.1 MGP_WSBEiJ_G0020644.1 mouse_genomes_project 14 49126929 49130873 + MGP_WSBEiJ_P0038568 Pabpn1 protein_coding protein_coding MGP_WSBEiJ_T0038569.1 MGP_WSBEiJ_G0020644.1 mouse_genomes_project 14 49126930 49131706 + MGP_WSBEiJ_P0038569 Pabpn1 protein_coding protein_coding MGP_WSBEiJ_T0038570.1 MGP_WSBEiJ_G0020644.1 mouse_genomes_project 14 49126930 49130833 + MGP_WSBEiJ_P0038570 Pabpn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038571.1 MGP_WSBEiJ_G0020644.1 mouse_genomes_project 14 49127392 49130911 + MGP_WSBEiJ_P0038571 Pabpn1 protein_coding protein_coding MGP_WSBEiJ_T0038572.1 MGP_WSBEiJ_G0020644.1 mouse_genomes_project 14 49127607 49128666 + MGP_WSBEiJ_P0038572 Pabpn1 protein_coding protein_coding MGP_WSBEiJ_T0038043.1 MGP_WSBEiJ_G0020484.1 mouse_genomes_project 14 27563509 27566282 + Syt15 protein_coding retained_intron MGP_WSBEiJ_T0038044.1 MGP_WSBEiJ_G0020484.1 mouse_genomes_project 14 27563960 27571665 + MGP_WSBEiJ_P0038044 Syt15 protein_coding protein_coding MGP_WSBEiJ_T0038045.1 MGP_WSBEiJ_G0020484.1 mouse_genomes_project 14 27563961 27574344 + MGP_WSBEiJ_P0038045 Syt15 protein_coding protein_coding MGP_WSBEiJ_T0038737.1 MGP_WSBEiJ_G0020686.1 mouse_genomes_project 14 50040008 50056741 - MGP_WSBEiJ_P0038737 Adcy4 protein_coding protein_coding MGP_WSBEiJ_T0038738.1 MGP_WSBEiJ_G0020686.1 mouse_genomes_project 14 50040043 50056718 - MGP_WSBEiJ_P0038738 Adcy4 protein_coding protein_coding MGP_WSBEiJ_T0002661.1 MGP_WSBEiJ_G0002545.1 mouse_genomes_project 14 47961213 47961381 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0038066.1 MGP_WSBEiJ_G0020493.1 mouse_genomes_project 14 27951428 27960969 - MGP_WSBEiJ_P0038066 Opn4 protein_coding protein_coding MGP_WSBEiJ_T0038067.1 MGP_WSBEiJ_G0020493.1 mouse_genomes_project 14 27953157 27960969 - MGP_WSBEiJ_P0038067 Opn4 protein_coding protein_coding MGP_WSBEiJ_T0038166.1 MGP_WSBEiJ_G0020531.1 mouse_genomes_project 14 40489283 40512995 + MGP_WSBEiJ_P0038166 Cgrrf1 protein_coding protein_coding MGP_WSBEiJ_T0038167.1 MGP_WSBEiJ_G0020531.1 mouse_genomes_project 14 40489368 40497496 + Cgrrf1 protein_coding retained_intron MGP_WSBEiJ_T0038168.1 MGP_WSBEiJ_G0020531.1 mouse_genomes_project 14 40489378 40503525 + Cgrrf1 protein_coding retained_intron MGP_WSBEiJ_T0038169.1 MGP_WSBEiJ_G0020531.1 mouse_genomes_project 14 40489393 40504986 + Cgrrf1 protein_coding retained_intron MGP_WSBEiJ_T0016827.1 MGP_WSBEiJ_G0014700.1 mouse_genomes_project 14 101421532 101426818 - Gm17066 processed_transcript processed_transcript MGP_WSBEiJ_T0016828.1 MGP_WSBEiJ_G0014700.1 mouse_genomes_project 14 101421551 101426603 - Gm17066 processed_transcript processed_transcript MGP_WSBEiJ_T0038977.1 MGP_WSBEiJ_G0020789.1 mouse_genomes_project 14 59939057 60000066 - MGP_WSBEiJ_P0038977 Fzd3 protein_coding protein_coding MGP_WSBEiJ_T0038978.1 MGP_WSBEiJ_G0020789.1 mouse_genomes_project 14 59947750 59965655 - Fzd3 protein_coding processed_transcript MGP_WSBEiJ_T0097850.1 MGP_WSBEiJ_G0036513.1 mouse_genomes_project 14 50757572 50757675 + Gm24667 snRNA snRNA MGP_WSBEiJ_T0009861.1 MGP_WSBEiJ_G0008018.1 mouse_genomes_project 14 111951905 111951989 + Mir17 miRNA miRNA MGP_WSBEiJ_T0012692.1 MGP_WSBEiJ_G0010822.1 mouse_genomes_project 14 11713212 11714356 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037752.1 MGP_WSBEiJ_G0020407.1 mouse_genomes_project 14 20516615 20571414 + MGP_WSBEiJ_P0037752 Fam208a protein_coding protein_coding MGP_WSBEiJ_T0038748.1 MGP_WSBEiJ_G0020691.1 mouse_genomes_project 14 50154780 50166602 + MGP_WSBEiJ_P0038748 Khnyn protein_coding protein_coding MGP_WSBEiJ_T0003496.1 MGP_WSBEiJ_G0003179.1 mouse_genomes_project 14 62159485 62169283 - Gm6878 antisense antisense MGP_WSBEiJ_T0038859.1 MGP_WSBEiJ_G0020739.1 mouse_genomes_project 14 54157052 54686682 - MGP_WSBEiJ_P0038859 Atp8a2 protein_coding protein_coding MGP_WSBEiJ_T0038860.1 MGP_WSBEiJ_G0020739.1 mouse_genomes_project 14 54539423 54599660 - MGP_WSBEiJ_P0038860 Atp8a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038861.1 MGP_WSBEiJ_G0020739.1 mouse_genomes_project 14 54552556 54711250 - MGP_WSBEiJ_P0038861 Atp8a2 protein_coding protein_coding MGP_WSBEiJ_T0038862.1 MGP_WSBEiJ_G0020739.1 mouse_genomes_project 14 54599359 54686834 - MGP_WSBEiJ_P0038862 Atp8a2 protein_coding protein_coding MGP_WSBEiJ_T0038863.1 MGP_WSBEiJ_G0020739.1 mouse_genomes_project 14 54599418 54600030 - MGP_WSBEiJ_P0038863 Atp8a2 protein_coding protein_coding MGP_WSBEiJ_T0038866.1 MGP_WSBEiJ_G0020739.1 mouse_genomes_project 14 54695467 54711214 - Atp8a2 protein_coding processed_transcript MGP_WSBEiJ_T0038929.1 MGP_WSBEiJ_G0020769.1 mouse_genomes_project 14 57816768 57851383 - MGP_WSBEiJ_P0038929 Fdft1 protein_coding protein_coding MGP_WSBEiJ_T0038770.1 MGP_WSBEiJ_G0020710.1 mouse_genomes_project 14 51028019 51057014 + MGP_WSBEiJ_P0038770 Mphosph8 protein_coding protein_coding MGP_WSBEiJ_T0038771.1 MGP_WSBEiJ_G0020710.1 mouse_genomes_project 14 51031818 51033562 + Mphosph8 protein_coding processed_transcript MGP_WSBEiJ_T0038772.1 MGP_WSBEiJ_G0020710.1 mouse_genomes_project 14 51047964 51050831 + Mphosph8 protein_coding processed_transcript MGP_WSBEiJ_T0038773.1 MGP_WSBEiJ_G0020710.1 mouse_genomes_project 14 51052719 51057011 + Mphosph8 protein_coding processed_transcript MGP_WSBEiJ_T0038774.1 MGP_WSBEiJ_G0020710.1 mouse_genomes_project 14 51053005 51057012 + Mphosph8 protein_coding processed_transcript MGP_WSBEiJ_T0038882.1 MGP_WSBEiJ_G0020747.1 mouse_genomes_project 14 55507886 55589176 - MGP_WSBEiJ_P0038882 Tnfrsf19 protein_coding protein_coding MGP_WSBEiJ_T0038883.1 MGP_WSBEiJ_G0020747.1 mouse_genomes_project 14 55507886 55597774 - MGP_WSBEiJ_P0038883 Tnfrsf19 protein_coding protein_coding MGP_WSBEiJ_T0039449.1 MGP_WSBEiJ_G0020960.1 mouse_genomes_project 14 115041241 115083023 - MGP_WSBEiJ_P0039449 Dct protein_coding protein_coding MGP_WSBEiJ_T0011175.1 MGP_WSBEiJ_G0009332.1 mouse_genomes_project 14 50883642 50883749 + Gm22431 misc_RNA misc_RNA MGP_WSBEiJ_T0099082.1 MGP_WSBEiJ_G0037745.1 mouse_genomes_project 14 24207950 24208030 - Snord69 snoRNA snoRNA MGP_WSBEiJ_T0037775.1 MGP_WSBEiJ_G0020417.1 mouse_genomes_project 14 23180587 23504363 - MGP_WSBEiJ_P0037775 Cacna1d protein_coding protein_coding MGP_WSBEiJ_T0037776.1 MGP_WSBEiJ_G0020417.1 mouse_genomes_project 14 23180587 23652175 - MGP_WSBEiJ_P0037776 Cacna1d protein_coding protein_coding MGP_WSBEiJ_T0037777.1 MGP_WSBEiJ_G0020417.1 mouse_genomes_project 14 23182709 23503999 - MGP_WSBEiJ_P0037777 Cacna1d protein_coding unknown_likely_coding MGP_WSBEiJ_T0012724.1 MGP_WSBEiJ_G0010854.1 mouse_genomes_project 14 52539183 52539541 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038796.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 51995006 52084675 - MGP_WSBEiJ_P0038796 Xpo4 protein_coding protein_coding MGP_WSBEiJ_T0038797.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 51996275 52084201 - MGP_WSBEiJ_P0038797 Xpo4 protein_coding protein_coding MGP_WSBEiJ_T0038798.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 52012236 52084237 - MGP_WSBEiJ_P0038798 Xpo4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038799.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 52046411 52084201 - MGP_WSBEiJ_P0038799 Xpo4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038800.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 52058751 52084209 - Xpo4 protein_coding processed_transcript MGP_WSBEiJ_T0038801.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 52058757 52084480 - Xpo4 protein_coding retained_intron MGP_WSBEiJ_T0038802.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 52058772 52084212 - Xpo4 protein_coding retained_intron MGP_WSBEiJ_T0038803.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 52058996 52084675 - MGP_WSBEiJ_P0038803 Xpo4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038805.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 52059473 52065615 - Xpo4 protein_coding retained_intron MGP_WSBEiJ_T0038806.1 MGP_WSBEiJ_G0020722.1 mouse_genomes_project 14 52064919 52084234 - Xpo4 protein_coding retained_intron MGP_WSBEiJ_T0002602.1 MGP_WSBEiJ_G0002495.1 mouse_genomes_project 14 48089484 48090092 + MGP_WSBEiJ_P0002602 Trdv1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002603.1 MGP_WSBEiJ_G0002495.1 mouse_genomes_project 14 48089484 48090092 + MGP_WSBEiJ_P0002603 Trdv1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0039436.1 MGP_WSBEiJ_G0020953.1 mouse_genomes_project 14 105392570 105396819 - MGP_WSBEiJ_P0039436 Slitrk1 protein_coding protein_coding MGP_WSBEiJ_T0009833.1 MGP_WSBEiJ_G0007990.1 mouse_genomes_project 14 49187873 49187956 - Mir208a miRNA miRNA MGP_WSBEiJ_T0096965.1 MGP_WSBEiJ_G0035646.1 mouse_genomes_project 14 106728391 106728502 + n-R5s50 rRNA rRNA MGP_WSBEiJ_T0038504.1 MGP_WSBEiJ_G0020625.1 mouse_genomes_project 14 48670558 48678965 + MGP_WSBEiJ_P0038504 Lrp10 protein_coding protein_coding MGP_WSBEiJ_T0099078.1 MGP_WSBEiJ_G0037741.1 mouse_genomes_project 14 11376736 11376871 + Gm22499 snoRNA snoRNA MGP_WSBEiJ_T0037897.1 MGP_WSBEiJ_G0020438.1 mouse_genomes_project 14 24419455 24431834 + MGP_WSBEiJ_P0037897 Sema3g protein_coding protein_coding MGP_WSBEiJ_T0038896.1 MGP_WSBEiJ_G0020753.1 mouse_genomes_project 14 56115018 56140961 - MGP_WSBEiJ_P0038896 Spryd7 protein_coding protein_coding MGP_WSBEiJ_T0038897.1 MGP_WSBEiJ_G0020753.1 mouse_genomes_project 14 56117330 56140833 - MGP_WSBEiJ_P0038897 Spryd7 protein_coding protein_coding MGP_WSBEiJ_T0039124.1 MGP_WSBEiJ_G0020846.1 mouse_genomes_project 14 64956104 65034142 - MGP_WSBEiJ_P0039124 Ppp3cc protein_coding protein_coding MGP_WSBEiJ_T0011177.1 MGP_WSBEiJ_G0009334.1 mouse_genomes_project 14 56231095 56231180 + Gm27747 misc_RNA misc_RNA MGP_WSBEiJ_T0038550.1 MGP_WSBEiJ_G0020637.1 mouse_genomes_project 14 48899286 48903859 + MGP_WSBEiJ_P0038550 1700123O20Rik protein_coding protein_coding MGP_WSBEiJ_T0000886.1 MGP_WSBEiJ_G0000824.1 mouse_genomes_project 14 56265791 56269888 - TEC TEC MGP_WSBEiJ_T0016814.1 MGP_WSBEiJ_G0014696.1 mouse_genomes_project 14 68007746 68021267 - Gm17233 processed_transcript processed_transcript MGP_WSBEiJ_T0009820.1 MGP_WSBEiJ_G0007977.1 mouse_genomes_project 14 18432935 18433020 + Mir3075 miRNA miRNA MGP_WSBEiJ_T0002559.1 MGP_WSBEiJ_G0002461.1 mouse_genomes_project 14 46860565 46862235 + MGP_WSBEiJ_P0002559 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002562.1 MGP_WSBEiJ_G0002461.1 mouse_genomes_project 14 46861930 46862235 + MGP_WSBEiJ_P0002562 TR_V_gene TR_V_gene MGP_WSBEiJ_T0097832.1 MGP_WSBEiJ_G0036495.1 mouse_genomes_project 14 13457896 13458003 + Gm25328 snRNA snRNA MGP_WSBEiJ_T0002511.1 MGP_WSBEiJ_G0002421.1 mouse_genomes_project 14 48420609 48420675 + MGP_WSBEiJ_P0002511 Traj2 TR_J_gene TR_J_gene MGP_WSBEiJ_T0009834.1 MGP_WSBEiJ_G0007991.1 mouse_genomes_project 14 49217994 49218071 - Mir208b miRNA miRNA MGP_WSBEiJ_T0006624.1 MGP_WSBEiJ_G0005474.1 mouse_genomes_project 14 71502185 71508477 - 4930444M15Rik lincRNA lincRNA MGP_WSBEiJ_T0039451.1 MGP_WSBEiJ_G0020962.1 mouse_genomes_project 14 115170064 115200272 + MGP_WSBEiJ_P0039451 Gpr180 protein_coding protein_coding MGP_WSBEiJ_T0039353.1 MGP_WSBEiJ_G0020928.1 mouse_genomes_project 14 95139152 95160883 - MGP_WSBEiJ_P0039353 Dis3 protein_coding protein_coding MGP_WSBEiJ_T0039354.1 MGP_WSBEiJ_G0020928.1 mouse_genomes_project 14 95139902 95160786 - MGP_WSBEiJ_P0039354 Dis3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038581.1 MGP_WSBEiJ_G0020650.1 mouse_genomes_project 14 49211670 49239809 - MGP_WSBEiJ_P0038581 Myh7 protein_coding protein_coding MGP_WSBEiJ_T0038582.1 MGP_WSBEiJ_G0020650.1 mouse_genomes_project 14 49211674 49239817 - MGP_WSBEiJ_P0038582 Myh7 protein_coding protein_coding MGP_WSBEiJ_T0038583.1 MGP_WSBEiJ_G0020650.1 mouse_genomes_project 14 49218173 49238056 - MGP_WSBEiJ_P0038583 Myh7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038585.1 MGP_WSBEiJ_G0020650.1 mouse_genomes_project 14 49237874 49239731 - MGP_WSBEiJ_P0038585 Myh7 protein_coding protein_coding MGP_WSBEiJ_T0038584.1 MGP_WSBEiJ_G0020651.1 mouse_genomes_project 14 49219225 49219315 + MGP_WSBEiJ_P0038584 Gm17428 protein_coding protein_coding MGP_WSBEiJ_T0039295.1 MGP_WSBEiJ_G0020901.1 mouse_genomes_project 14 73307840 73338028 - MGP_WSBEiJ_P0039295 Tnfsf11 protein_coding protein_coding MGP_WSBEiJ_T0038003.1 MGP_WSBEiJ_G0020469.1 mouse_genomes_project 14 26284980 26311466 + MGP_WSBEiJ_P0038003 Lrrc18 protein_coding protein_coding MGP_WSBEiJ_T0038004.1 MGP_WSBEiJ_G0020469.1 mouse_genomes_project 14 26284996 26305562 + MGP_WSBEiJ_P0038004 Lrrc18 protein_coding protein_coding MGP_WSBEiJ_T0038005.1 MGP_WSBEiJ_G0020469.1 mouse_genomes_project 14 26285001 26304844 + MGP_WSBEiJ_P0038005 Lrrc18 protein_coding protein_coding MGP_WSBEiJ_T0038006.1 MGP_WSBEiJ_G0020469.1 mouse_genomes_project 14 26285044 26305005 + MGP_WSBEiJ_P0038006 Lrrc18 protein_coding protein_coding MGP_WSBEiJ_T0038007.1 MGP_WSBEiJ_G0020469.1 mouse_genomes_project 14 26285056 26310329 + MGP_WSBEiJ_P0038007 Lrrc18 protein_coding protein_coding MGP_WSBEiJ_T0038008.1 MGP_WSBEiJ_G0020469.1 mouse_genomes_project 14 26289980 26304625 + Lrrc18 protein_coding processed_transcript MGP_WSBEiJ_T0012706.1 MGP_WSBEiJ_G0010836.1 mouse_genomes_project 14 38309237 38310223 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037478.1 MGP_WSBEiJ_G0020333.1 mouse_genomes_project 14 10197972 10600771 + MGP_WSBEiJ_P0037478 Thrb protein_coding protein_coding MGP_WSBEiJ_T0037479.1 MGP_WSBEiJ_G0020333.1 mouse_genomes_project 14 10197972 10602301 + MGP_WSBEiJ_P0037479 Thrb protein_coding protein_coding MGP_WSBEiJ_T0037480.1 MGP_WSBEiJ_G0020333.1 mouse_genomes_project 14 10546902 10602299 + MGP_WSBEiJ_P0037480 Thrb protein_coding protein_coding MGP_WSBEiJ_T0037386.1 MGP_WSBEiJ_G0020300.1 mouse_genomes_project 14 275191 306313 - MGP_WSBEiJ_P0037386 Dnase1l3 protein_coding protein_coding MGP_WSBEiJ_T0037387.1 MGP_WSBEiJ_G0020300.1 mouse_genomes_project 14 286513 287850 - Dnase1l3 protein_coding processed_transcript MGP_WSBEiJ_T0009816.1 MGP_WSBEiJ_G0007973.1 mouse_genomes_project 14 10743828 10743907 + Gm44469 miRNA miRNA MGP_WSBEiJ_T0012742.1 MGP_WSBEiJ_G0010872.1 mouse_genomes_project 14 94125148 94125642 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038516.1 MGP_WSBEiJ_G0020628.1 mouse_genomes_project 14 48749410 48763474 - MGP_WSBEiJ_P0038516 Haus4 protein_coding protein_coding MGP_WSBEiJ_T0002571.1 MGP_WSBEiJ_G0002470.1 mouse_genomes_project 14 46920397 46920867 + MGP_WSBEiJ_P0002571 TR_V_gene TR_V_gene MGP_WSBEiJ_T0039103.1 MGP_WSBEiJ_G0020837.1 mouse_genomes_project 14 64472732 64489442 + MGP_WSBEiJ_P0039103 Tnfrsf10b protein_coding protein_coding MGP_WSBEiJ_T0097837.1 MGP_WSBEiJ_G0036500.1 mouse_genomes_project 14 30215573 30215679 + Gm25204 snRNA snRNA MGP_WSBEiJ_T0039146.1 MGP_WSBEiJ_G0020854.1 mouse_genomes_project 14 65303036 65306729 + MGP_WSBEiJ_P0039146 Reep4 protein_coding protein_coding MGP_WSBEiJ_T0038958.1 MGP_WSBEiJ_G0020782.1 mouse_genomes_project 14 58805521 58816897 + MGP_WSBEiJ_P0038958 Prss51 protein_coding protein_coding MGP_WSBEiJ_T0038959.1 MGP_WSBEiJ_G0020782.1 mouse_genomes_project 14 58812938 58816893 + MGP_WSBEiJ_P0038959 Prss51 protein_coding protein_coding MGP_WSBEiJ_T0038960.1 MGP_WSBEiJ_G0020782.1 mouse_genomes_project 14 58812968 58816335 + MGP_WSBEiJ_P0038960 Prss51 protein_coding protein_coding MGP_WSBEiJ_T0037411.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 1922210 2822884 - MGP_WSBEiJ_P0037411 Fhit protein_coding protein_coding MGP_WSBEiJ_T0037412.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 1922218 3518707 - MGP_WSBEiJ_P0037412 Fhit protein_coding protein_coding MGP_WSBEiJ_T0037413.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 1922218 3518704 - MGP_WSBEiJ_P0037413 Fhit protein_coding protein_coding MGP_WSBEiJ_T0037414.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 1922511 2233027 - MGP_WSBEiJ_P0037414 Fhit protein_coding unknown_likely_coding MGP_WSBEiJ_T0037415.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 1922511 2790773 - MGP_WSBEiJ_P0037415 Fhit protein_coding protein_coding MGP_WSBEiJ_T0037416.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 1947779 3481243 - MGP_WSBEiJ_P0037416 Fhit protein_coding protein_coding MGP_WSBEiJ_T0037417.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 2141191 3480831 - Fhit protein_coding retained_intron MGP_WSBEiJ_T0037418.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 2141298 3481214 - MGP_WSBEiJ_P0037418 Fhit protein_coding protein_coding MGP_WSBEiJ_T0037419.1 MGP_WSBEiJ_G0020310.1 mouse_genomes_project 14 2230770 3518707 - MGP_WSBEiJ_P0037419 Fhit protein_coding protein_coding MGP_WSBEiJ_T0038684.1 MGP_WSBEiJ_G0020671.1 mouse_genomes_project 14 49886727 49894137 + MGP_WSBEiJ_P0038684 Rec8 protein_coding protein_coding MGP_WSBEiJ_T0038685.1 MGP_WSBEiJ_G0020671.1 mouse_genomes_project 14 49886873 49887501 + Rec8 protein_coding retained_intron MGP_WSBEiJ_T0038686.1 MGP_WSBEiJ_G0020671.1 mouse_genomes_project 14 49892311 49893253 + Rec8 protein_coding retained_intron MGP_WSBEiJ_T0038687.1 MGP_WSBEiJ_G0020671.1 mouse_genomes_project 14 49893660 49894137 + Rec8 protein_coding retained_intron MGP_WSBEiJ_T0006551.1 MGP_WSBEiJ_G0005424.1 mouse_genomes_project 14 1009358 1016263 + 4930455B14Rik lincRNA lincRNA MGP_WSBEiJ_T0006552.1 MGP_WSBEiJ_G0005424.1 mouse_genomes_project 14 1009358 1016321 + 4930455B14Rik lincRNA lincRNA MGP_WSBEiJ_T0037592.1 MGP_WSBEiJ_G0020369.1 mouse_genomes_project 14 14467255 14509437 - MGP_WSBEiJ_P0037592 Dupd1 protein_coding protein_coding MGP_WSBEiJ_T0012716.1 MGP_WSBEiJ_G0010846.1 mouse_genomes_project 14 46788970 46789195 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039454.1 MGP_WSBEiJ_G0020965.1 mouse_genomes_project 14 115531258 115765499 - MGP_WSBEiJ_P0039454 Abcc4 protein_coding protein_coding MGP_WSBEiJ_T0039455.1 MGP_WSBEiJ_G0020965.1 mouse_genomes_project 14 115531258 115765499 - MGP_WSBEiJ_P0039455 Abcc4 protein_coding protein_coding MGP_WSBEiJ_T0016813.1 MGP_WSBEiJ_G0014695.1 mouse_genomes_project 14 62292360 62310484 - processed_transcript processed_transcript MGP_WSBEiJ_T0097864.1 MGP_WSBEiJ_G0036527.1 mouse_genomes_project 14 92362029 92362145 + Gm24043 snRNA snRNA MGP_WSBEiJ_T0011173.1 MGP_WSBEiJ_G0009330.1 mouse_genomes_project 14 39068544 39068827 - Gm22637 misc_RNA misc_RNA MGP_WSBEiJ_T0012730.1 MGP_WSBEiJ_G0010860.1 mouse_genomes_project 14 64485708 64488338 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038078.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30326731 30422747 - MGP_WSBEiJ_P0038078 Ccser2 protein_coding protein_coding MGP_WSBEiJ_T0038079.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30326731 30422657 - MGP_WSBEiJ_P0038079 Ccser2 protein_coding protein_coding MGP_WSBEiJ_T0038080.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30330637 30357978 - Ccser2 protein_coding processed_transcript MGP_WSBEiJ_T0038081.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30330638 30389041 - MGP_WSBEiJ_P0038081 Ccser2 protein_coding protein_coding MGP_WSBEiJ_T0038082.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30330893 30361417 - MGP_WSBEiJ_P0038082 Ccser2 protein_coding protein_coding MGP_WSBEiJ_T0038083.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30330940 30372142 - MGP_WSBEiJ_P0038083 Ccser2 protein_coding protein_coding MGP_WSBEiJ_T0038084.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30331156 30372344 - MGP_WSBEiJ_P0038084 Ccser2 protein_coding protein_coding MGP_WSBEiJ_T0038085.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30331315 30379676 - MGP_WSBEiJ_P0038085 Ccser2 protein_coding protein_coding MGP_WSBEiJ_T0038086.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30331367 30338087 - Ccser2 protein_coding retained_intron MGP_WSBEiJ_T0038087.1 MGP_WSBEiJ_G0020498.1 mouse_genomes_project 14 30352492 30393409 - Ccser2 protein_coding processed_transcript MGP_WSBEiJ_T0012748.1 MGP_WSBEiJ_G0010878.1 mouse_genomes_project 14 105164687 105165137 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037410.1 MGP_WSBEiJ_G0020309.1 mouse_genomes_project 14 768331 1009209 - MGP_WSBEiJ_P0037410 4930452B06Rik protein_coding protein_coding MGP_WSBEiJ_T0037441.1 MGP_WSBEiJ_G0020318.1 mouse_genomes_project 14 6271688 6367084 - MGP_WSBEiJ_P0037441 Gm281 protein_coding protein_coding MGP_WSBEiJ_T0039461.1 MGP_WSBEiJ_G0020968.1 mouse_genomes_project 14 116006230 116054116 + MGP_WSBEiJ_P0039461 Dnajc3 protein_coding protein_coding MGP_WSBEiJ_T0016785.1 MGP_WSBEiJ_G0014686.1 mouse_genomes_project 14 12218024 12221511 + processed_transcript processed_transcript MGP_WSBEiJ_T0038781.1 MGP_WSBEiJ_G0020713.1 mouse_genomes_project 14 51274840 51353162 + MGP_WSBEiJ_P0038781 Zmym2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096782.1 MGP_WSBEiJ_G0035463.1 mouse_genomes_project 14 103028939 103029129 - pseudogene pseudogene MGP_WSBEiJ_T0037477.1 MGP_WSBEiJ_G0020332.1 mouse_genomes_project 14 8951736 9109543 - MGP_WSBEiJ_P0037477 Rarb protein_coding protein_coding MGP_WSBEiJ_T0038946.1 MGP_WSBEiJ_G0020776.1 mouse_genomes_project 14 58311783 58529040 + MGP_WSBEiJ_P0038946 Xkr6 protein_coding protein_coding MGP_WSBEiJ_T0038947.1 MGP_WSBEiJ_G0020776.1 mouse_genomes_project 14 58311955 58369928 + MGP_WSBEiJ_P0038947 Xkr6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038948.1 MGP_WSBEiJ_G0020776.1 mouse_genomes_project 14 58312306 58366555 + MGP_WSBEiJ_P0038948 Xkr6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038949.1 MGP_WSBEiJ_G0020776.1 mouse_genomes_project 14 58362903 58366843 + Xkr6 protein_coding processed_transcript MGP_WSBEiJ_T0038950.1 MGP_WSBEiJ_G0020776.1 mouse_genomes_project 14 58501846 58528250 + MGP_WSBEiJ_P0038950 Xkr6 protein_coding protein_coding MGP_WSBEiJ_T0097870.1 MGP_WSBEiJ_G0036533.1 mouse_genomes_project 14 96909069 96909170 - Gm23538 snRNA snRNA MGP_WSBEiJ_T0038852.1 MGP_WSBEiJ_G0020736.1 mouse_genomes_project 14 53938832 54056558 + MGP_WSBEiJ_P0038852 Cab39l protein_coding protein_coding MGP_WSBEiJ_T0002466.1 MGP_WSBEiJ_G0002378.1 mouse_genomes_project 14 48369733 48369792 + Traj49 TR_J_gene processed_transcript MGP_WSBEiJ_T0002467.1 MGP_WSBEiJ_G0002378.1 mouse_genomes_project 14 48369733 48369795 + MGP_WSBEiJ_P0002467 Traj49 TR_J_gene TR_J_gene MGP_WSBEiJ_T0006586.1 MGP_WSBEiJ_G0005448.1 mouse_genomes_project 14 40486138 40489177 - Gm10101 lincRNA lincRNA MGP_WSBEiJ_T0006587.1 MGP_WSBEiJ_G0005448.1 mouse_genomes_project 14 40486143 40489177 - Gm10101 lincRNA lincRNA MGP_WSBEiJ_T0099118.1 MGP_WSBEiJ_G0037781.1 mouse_genomes_project 14 92896568 92896660 + Gm24770 snoRNA snoRNA MGP_WSBEiJ_T0006627.1 MGP_WSBEiJ_G0005476.1 mouse_genomes_project 14 74967925 75096894 + Gm6999 lincRNA lincRNA MGP_WSBEiJ_T0037898.1 MGP_WSBEiJ_G0020439.1 mouse_genomes_project 14 24439186 24452686 - MGP_WSBEiJ_P0037898 Phf7 protein_coding protein_coding MGP_WSBEiJ_T0037494.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11125594 11446843 - MGP_WSBEiJ_P0037494 Ube2e2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037495.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11125596 11452564 - MGP_WSBEiJ_P0037495 Ube2e2 protein_coding protein_coding MGP_WSBEiJ_T0037496.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11126060 11446691 - MGP_WSBEiJ_P0037496 Ube2e2 protein_coding protein_coding MGP_WSBEiJ_T0037497.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11126313 11446835 - MGP_WSBEiJ_P0037497 Ube2e2 protein_coding protein_coding MGP_WSBEiJ_T0037498.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11126382 11147567 - Ube2e2 protein_coding processed_transcript MGP_WSBEiJ_T0037499.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11126382 11446787 - MGP_WSBEiJ_P0037499 Ube2e2 protein_coding protein_coding MGP_WSBEiJ_T0037500.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11140409 11216235 - Ube2e2 protein_coding processed_transcript MGP_WSBEiJ_T0037501.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11140409 11451805 - MGP_WSBEiJ_P0037501 Ube2e2 protein_coding protein_coding MGP_WSBEiJ_T0037502.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11147459 11452506 - Ube2e2 protein_coding processed_transcript MGP_WSBEiJ_T0037503.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11182072 11452433 - MGP_WSBEiJ_P0037503 Ube2e2 protein_coding protein_coding MGP_WSBEiJ_T0037504.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11182084 11453057 - MGP_WSBEiJ_P0037504 Ube2e2 protein_coding protein_coding MGP_WSBEiJ_T0037505.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11182142 11452433 - Ube2e2 protein_coding processed_transcript MGP_WSBEiJ_T0037506.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11190157 11452481 - Ube2e2 protein_coding processed_transcript MGP_WSBEiJ_T0037507.1 MGP_WSBEiJ_G0020337.1 mouse_genomes_project 14 11444760 11451670 - Ube2e2 protein_coding retained_intron MGP_WSBEiJ_T0037919.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24766020 24860932 - MGP_WSBEiJ_P0037919 Hacl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037923.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24816637 24860998 - MGP_WSBEiJ_P0037923 Hacl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037924.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24825203 24861018 - MGP_WSBEiJ_P0037924 Hacl1 protein_coding protein_coding MGP_WSBEiJ_T0037925.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24825640 24832134 - Hacl1 protein_coding processed_transcript MGP_WSBEiJ_T0037926.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24825944 24828150 - Hacl1 protein_coding processed_transcript MGP_WSBEiJ_T0037927.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24825986 24860932 - MGP_WSBEiJ_P0037927 Hacl1 protein_coding protein_coding MGP_WSBEiJ_T0037928.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24825986 24860966 - MGP_WSBEiJ_P0037928 Hacl1 protein_coding protein_coding MGP_WSBEiJ_T0037929.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24825986 24860932 - MGP_WSBEiJ_P0037929 Hacl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037930.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24825986 24860932 - MGP_WSBEiJ_P0037930 Hacl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037931.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24844252 24861226 - MGP_WSBEiJ_P0037931 Hacl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037932.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24847661 24861311 - MGP_WSBEiJ_P0037932 Hacl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037933.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24848473 24861000 - Hacl1 protein_coding retained_intron MGP_WSBEiJ_T0037934.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24853398 24860965 - Hacl1 protein_coding retained_intron MGP_WSBEiJ_T0037935.1 MGP_WSBEiJ_G0020447.1 mouse_genomes_project 14 24853537 24861340 - Hacl1 protein_coding retained_intron MGP_WSBEiJ_T0038453.1 MGP_WSBEiJ_G0020611.1 mouse_genomes_project 14 46510490 46511432 - MGP_WSBEiJ_P0038453 Olfr1513 protein_coding protein_coding MGP_WSBEiJ_T0099128.1 MGP_WSBEiJ_G0037791.1 mouse_genomes_project 14 103103667 103103794 + Gm23437 snoRNA snoRNA MGP_WSBEiJ_T0037558.1 MGP_WSBEiJ_G0020358.1 mouse_genomes_project 14 13429163 13449678 + MGP_WSBEiJ_P0037558 Sec24c protein_coding protein_coding MGP_WSBEiJ_T0037559.1 MGP_WSBEiJ_G0020358.1 mouse_genomes_project 14 13429173 13449685 + MGP_WSBEiJ_P0037559 Sec24c protein_coding unknown_likely_coding MGP_WSBEiJ_T0097868.1 MGP_WSBEiJ_G0036531.1 mouse_genomes_project 14 95439738 95439894 - Gm25130 snRNA snRNA MGP_WSBEiJ_T0002552.1 MGP_WSBEiJ_G0002455.1 mouse_genomes_project 14 46776700 46777217 + MGP_WSBEiJ_P0002552 Trav5-1 TR_V_gene TR_V_gene MGP_WSBEiJ_T0097167.1 MGP_WSBEiJ_G0035848.1 mouse_genomes_project 14 44739118 44739355 - Rprl2 ribozyme ribozyme MGP_WSBEiJ_T0038759.1 MGP_WSBEiJ_G0020701.1 mouse_genomes_project 14 50434054 50480726 - MGP_WSBEiJ_P0038759 protein_coding protein_coding MGP_WSBEiJ_T0099099.1 MGP_WSBEiJ_G0037762.1 mouse_genomes_project 14 57152120 57152250 + Gm24625 snoRNA snoRNA MGP_WSBEiJ_T0011180.1 MGP_WSBEiJ_G0009337.1 mouse_genomes_project 14 59944925 59945001 - Gm27263 misc_RNA misc_RNA MGP_WSBEiJ_T0039259.1 MGP_WSBEiJ_G0020888.1 mouse_genomes_project 14 70841591 70963620 - MGP_WSBEiJ_P0039259 Gtf2f2 protein_coding protein_coding MGP_WSBEiJ_T0039217.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69616786 69638849 + MGP_WSBEiJ_P0039217 Esd protein_coding protein_coding MGP_WSBEiJ_T0039218.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69616833 69637070 + MGP_WSBEiJ_P0039218 Esd protein_coding protein_coding MGP_WSBEiJ_T0039219.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69616852 69636089 + MGP_WSBEiJ_P0039219 Esd protein_coding protein_coding MGP_WSBEiJ_T0039220.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69616852 69636030 + MGP_WSBEiJ_P0039220 Esd protein_coding protein_coding MGP_WSBEiJ_T0039221.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69616855 69627130 + Esd protein_coding retained_intron MGP_WSBEiJ_T0039222.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69616857 69623986 + Esd protein_coding processed_transcript MGP_WSBEiJ_T0039223.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69616893 69631162 + MGP_WSBEiJ_P0039223 Esd protein_coding protein_coding MGP_WSBEiJ_T0039224.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69616920 69636153 + MGP_WSBEiJ_P0039224 Esd protein_coding protein_coding MGP_WSBEiJ_T0039225.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69622971 69628080 + Esd protein_coding retained_intron MGP_WSBEiJ_T0039226.1 MGP_WSBEiJ_G0020875.1 mouse_genomes_project 14 69623034 69636060 + MGP_WSBEiJ_P0039226 Esd protein_coding protein_coding MGP_WSBEiJ_T0039231.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70033731 70106917 + MGP_WSBEiJ_P0039231 Lcp1 protein_coding protein_coding MGP_WSBEiJ_T0039232.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70033789 70051875 + Lcp1 protein_coding processed_transcript MGP_WSBEiJ_T0039233.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70033789 70107987 + MGP_WSBEiJ_P0039233 Lcp1 protein_coding protein_coding MGP_WSBEiJ_T0039234.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70034129 70107936 + MGP_WSBEiJ_P0039234 Lcp1 protein_coding protein_coding MGP_WSBEiJ_T0039235.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70034184 70137249 + MGP_WSBEiJ_P0039235 Lcp1 protein_coding protein_coding MGP_WSBEiJ_T0039236.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70038962 70138295 + MGP_WSBEiJ_P0039236 Lcp1 protein_coding protein_coding MGP_WSBEiJ_T0039237.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70039105 70107927 + MGP_WSBEiJ_P0039237 Lcp1 protein_coding protein_coding MGP_WSBEiJ_T0039238.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70081029 70085397 + Lcp1 protein_coding retained_intron MGP_WSBEiJ_T0039239.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70082290 70105594 + Lcp1 protein_coding processed_transcript MGP_WSBEiJ_T0039240.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70097706 70138269 + MGP_WSBEiJ_P0039240 Lcp1 protein_coding protein_coding MGP_WSBEiJ_T0039241.1 MGP_WSBEiJ_G0020879.1 mouse_genomes_project 14 70105351 70106839 + Lcp1 protein_coding processed_transcript MGP_WSBEiJ_T0099125.1 MGP_WSBEiJ_G0037788.1 mouse_genomes_project 14 100936487 100936604 - Gm25724 snoRNA snoRNA MGP_WSBEiJ_T0039227.1 MGP_WSBEiJ_G0020876.1 mouse_genomes_project 14 69640933 69844572 - MGP_WSBEiJ_P0039227 Lrch1 protein_coding protein_coding MGP_WSBEiJ_T0039228.1 MGP_WSBEiJ_G0020876.1 mouse_genomes_project 14 69649561 69844355 - MGP_WSBEiJ_P0039228 Lrch1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012756.1 MGP_WSBEiJ_G0010886.1 mouse_genomes_project 14 120934813 120935027 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037802.1 MGP_WSBEiJ_G0020422.1 mouse_genomes_project 14 23888701 23990497 + MGP_WSBEiJ_P0037802 Sfmbt1 protein_coding protein_coding MGP_WSBEiJ_T0037803.1 MGP_WSBEiJ_G0020422.1 mouse_genomes_project 14 23889019 23987618 + MGP_WSBEiJ_P0037803 Sfmbt1 protein_coding protein_coding MGP_WSBEiJ_T0037804.1 MGP_WSBEiJ_G0020422.1 mouse_genomes_project 14 23889467 23996375 + MGP_WSBEiJ_P0037804 Sfmbt1 protein_coding protein_coding MGP_WSBEiJ_T0037805.1 MGP_WSBEiJ_G0020422.1 mouse_genomes_project 14 23890347 23990880 + MGP_WSBEiJ_P0037805 Sfmbt1 protein_coding protein_coding MGP_WSBEiJ_T0037806.1 MGP_WSBEiJ_G0020422.1 mouse_genomes_project 14 23944106 23990879 + MGP_WSBEiJ_P0037806 Sfmbt1 protein_coding protein_coding MGP_WSBEiJ_T0037807.1 MGP_WSBEiJ_G0020422.1 mouse_genomes_project 14 23966573 23968329 + Sfmbt1 protein_coding retained_intron MGP_WSBEiJ_T0009851.1 MGP_WSBEiJ_G0008008.1 mouse_genomes_project 14 68033254 68033343 - Mir687 miRNA miRNA MGP_WSBEiJ_T0016807.1 MGP_WSBEiJ_G0014691.1 mouse_genomes_project 14 61090942 61092750 - 1700001G11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016808.1 MGP_WSBEiJ_G0014691.1 mouse_genomes_project 14 61090943 61092561 - 1700001G11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016809.1 MGP_WSBEiJ_G0014691.1 mouse_genomes_project 14 61091103 61092504 - 1700001G11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0097844.1 MGP_WSBEiJ_G0036507.1 mouse_genomes_project 14 43343255 43343396 - Gm22116 snRNA snRNA MGP_WSBEiJ_T0002460.1 MGP_WSBEiJ_G0002373.1 mouse_genomes_project 14 48359651 48359716 + Traj57 TR_J_gene processed_transcript MGP_WSBEiJ_T0002461.1 MGP_WSBEiJ_G0002373.1 mouse_genomes_project 14 48359653 48359716 + MGP_WSBEiJ_P0002461 Traj57 TR_J_gene TR_J_gene MGP_WSBEiJ_T0096779.1 MGP_WSBEiJ_G0035460.1 mouse_genomes_project 14 13804282 13814369 - pseudogene pseudogene MGP_WSBEiJ_T0000880.1 MGP_WSBEiJ_G0000818.1 mouse_genomes_project 14 46417782 46423559 + TEC TEC MGP_WSBEiJ_T0038035.1 MGP_WSBEiJ_G0020477.1 mouse_genomes_project 14 27302458 27314341 - MGP_WSBEiJ_P0038035 Zfp488 protein_coding protein_coding MGP_WSBEiJ_T0037836.1 MGP_WSBEiJ_G0020430.1 mouse_genomes_project 14 24197051 24205410 + MGP_WSBEiJ_P0037836 Glt8d1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038937.1 MGP_WSBEiJ_G0020773.1 mouse_genomes_project 14 58134139 58164562 + MGP_WSBEiJ_P0038937 Fam167a protein_coding protein_coding MGP_WSBEiJ_T0038938.1 MGP_WSBEiJ_G0020773.1 mouse_genomes_project 14 58134154 58140074 + Fam167a protein_coding retained_intron MGP_WSBEiJ_T0012731.1 MGP_WSBEiJ_G0010861.1 mouse_genomes_project 14 66610427 66611412 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038509.1 MGP_WSBEiJ_G0020627.1 mouse_genomes_project 14 48720542 48731768 - MGP_WSBEiJ_P0038509 Prmt5 protein_coding protein_coding MGP_WSBEiJ_T0038510.1 MGP_WSBEiJ_G0020627.1 mouse_genomes_project 14 48724357 48726813 - MGP_WSBEiJ_P0038510 Prmt5 protein_coding protein_coding MGP_WSBEiJ_T0038511.1 MGP_WSBEiJ_G0020627.1 mouse_genomes_project 14 48724562 48731678 - MGP_WSBEiJ_P0038511 Prmt5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038512.1 MGP_WSBEiJ_G0020627.1 mouse_genomes_project 14 48726729 48731636 - Prmt5 protein_coding retained_intron MGP_WSBEiJ_T0038513.1 MGP_WSBEiJ_G0020627.1 mouse_genomes_project 14 48727294 48731713 - Prmt5 protein_coding retained_intron MGP_WSBEiJ_T0038514.1 MGP_WSBEiJ_G0020627.1 mouse_genomes_project 14 48727947 48729901 - Prmt5 protein_coding processed_transcript MGP_WSBEiJ_T0038515.1 MGP_WSBEiJ_G0020627.1 mouse_genomes_project 14 48730393 48731604 - Prmt5 protein_coding processed_transcript MGP_WSBEiJ_T0097849.1 MGP_WSBEiJ_G0036512.1 mouse_genomes_project 14 48791689 48791797 + Gm24705 snRNA snRNA MGP_WSBEiJ_T0037512.1 MGP_WSBEiJ_G0020342.1 mouse_genomes_project 14 12594829 12711108 - MGP_WSBEiJ_P0037512 Gng2 protein_coding protein_coding MGP_WSBEiJ_T0037513.1 MGP_WSBEiJ_G0020342.1 mouse_genomes_project 14 12597937 12711031 - MGP_WSBEiJ_P0037513 Gng2 protein_coding protein_coding MGP_WSBEiJ_T0037514.1 MGP_WSBEiJ_G0020342.1 mouse_genomes_project 14 12597937 12711486 - MGP_WSBEiJ_P0037514 Gng2 protein_coding protein_coding MGP_WSBEiJ_T0037515.1 MGP_WSBEiJ_G0020342.1 mouse_genomes_project 14 12597978 12710869 - MGP_WSBEiJ_P0037515 Gng2 protein_coding protein_coding MGP_WSBEiJ_T0037516.1 MGP_WSBEiJ_G0020342.1 mouse_genomes_project 14 12598021 12711043 - MGP_WSBEiJ_P0037516 Gng2 protein_coding protein_coding MGP_WSBEiJ_T0037517.1 MGP_WSBEiJ_G0020342.1 mouse_genomes_project 14 12598075 12710503 - MGP_WSBEiJ_P0037517 Gng2 protein_coding protein_coding MGP_WSBEiJ_T0039280.1 MGP_WSBEiJ_G0020894.1 mouse_genomes_project 14 72038616 72051062 - MGP_WSBEiJ_P0039280 Lacc1 protein_coding protein_coding MGP_WSBEiJ_T0039281.1 MGP_WSBEiJ_G0020894.1 mouse_genomes_project 14 72046765 72051325 - Lacc1 protein_coding retained_intron MGP_WSBEiJ_T0039282.1 MGP_WSBEiJ_G0020894.1 mouse_genomes_project 14 72049374 72050502 - MGP_WSBEiJ_P0039282 Lacc1 protein_coding protein_coding MGP_WSBEiJ_T0006553.1 MGP_WSBEiJ_G0005425.1 mouse_genomes_project 14 5565108 5726243 - lincRNA lincRNA MGP_WSBEiJ_T0006554.1 MGP_WSBEiJ_G0005425.1 mouse_genomes_project 14 5705802 5726235 - lincRNA lincRNA MGP_WSBEiJ_T0038739.1 MGP_WSBEiJ_G0020687.1 mouse_genomes_project 14 50057695 50061556 - MGP_WSBEiJ_P0038739 Ripk3 protein_coding protein_coding MGP_WSBEiJ_T0038740.1 MGP_WSBEiJ_G0020687.1 mouse_genomes_project 14 50057695 50061556 - MGP_WSBEiJ_P0038740 Ripk3 protein_coding protein_coding MGP_WSBEiJ_T0038741.1 MGP_WSBEiJ_G0020687.1 mouse_genomes_project 14 50057695 50061556 - MGP_WSBEiJ_P0038741 Ripk3 protein_coding protein_coding MGP_WSBEiJ_T0009814.1 MGP_WSBEiJ_G0007971.1 mouse_genomes_project 14 3647656 3647741 + Mir5124b miRNA miRNA MGP_WSBEiJ_T0038766.1 MGP_WSBEiJ_G0020708.1 mouse_genomes_project 14 50874421 50922094 - MGP_WSBEiJ_P0038766 Cenpj protein_coding protein_coding MGP_WSBEiJ_T0038767.1 MGP_WSBEiJ_G0020708.1 mouse_genomes_project 14 50874443 50925781 - MGP_WSBEiJ_P0038767 Cenpj protein_coding unknown_likely_coding MGP_WSBEiJ_T0037429.1 MGP_WSBEiJ_G0020314.1 mouse_genomes_project 14 4745150 4749839 - MGP_WSBEiJ_P0037429 Fezf2 protein_coding protein_coding MGP_WSBEiJ_T0038753.1 MGP_WSBEiJ_G0020695.1 mouse_genomes_project 14 50330665 50333177 + MGP_WSBEiJ_P0038753 Mcpt2 protein_coding protein_coding MGP_WSBEiJ_T0097846.1 MGP_WSBEiJ_G0036509.1 mouse_genomes_project 14 44653195 44653302 + Gm24316 snRNA snRNA MGP_WSBEiJ_T0038136.1 MGP_WSBEiJ_G0020522.1 mouse_genomes_project 14 38951578 38974651 + MGP_WSBEiJ_P0038136 protein_coding protein_coding MGP_WSBEiJ_T0039375.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 97936405 98142970 + MGP_WSBEiJ_P0039375 Lmo7 protein_coding protein_coding MGP_WSBEiJ_T0039376.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98034556 98086831 + Lmo7 protein_coding processed_transcript MGP_WSBEiJ_T0039377.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98044089 98142949 + MGP_WSBEiJ_P0039377 Lmo7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039378.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98045877 98090417 + Lmo7 protein_coding processed_transcript MGP_WSBEiJ_T0039379.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98046087 98091836 + Lmo7 protein_coding retained_intron MGP_WSBEiJ_T0039380.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98046087 98104569 + MGP_WSBEiJ_P0039380 Lmo7 protein_coding protein_coding MGP_WSBEiJ_T0039381.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98046228 98142947 + MGP_WSBEiJ_P0039381 Lmo7 protein_coding protein_coding MGP_WSBEiJ_T0039382.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98046399 98118669 + Lmo7 protein_coding retained_intron MGP_WSBEiJ_T0039383.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98075391 98090220 + Lmo7 protein_coding processed_transcript MGP_WSBEiJ_T0039384.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98082751 98142786 + MGP_WSBEiJ_P0039384 Lmo7 protein_coding protein_coding MGP_WSBEiJ_T0039385.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98086840 98142455 + MGP_WSBEiJ_P0039385 Lmo7 protein_coding protein_coding MGP_WSBEiJ_T0039386.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98090089 98106043 + Lmo7 protein_coding retained_intron MGP_WSBEiJ_T0039387.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98090121 98094203 + Lmo7 protein_coding retained_intron MGP_WSBEiJ_T0039388.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98126001 98139025 + Lmo7 protein_coding retained_intron MGP_WSBEiJ_T0039389.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98134569 98141402 + Lmo7 protein_coding processed_transcript MGP_WSBEiJ_T0039390.1 MGP_WSBEiJ_G0020937.1 mouse_genomes_project 14 98137523 98141131 + Lmo7 protein_coding processed_transcript MGP_WSBEiJ_T0100574.1 MGP_WSBEiJ_G0039032.1 mouse_genomes_project 14 45048304 45048737 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0037566.1 MGP_WSBEiJ_G0020365.1 mouse_genomes_project 14 13696635 13802202 + MGP_WSBEiJ_P0037566 Vcl protein_coding protein_coding MGP_WSBEiJ_T0099087.1 MGP_WSBEiJ_G0037750.1 mouse_genomes_project 14 27441642 27441731 + Gm24998 snoRNA snoRNA MGP_WSBEiJ_T0006558.1 MGP_WSBEiJ_G0005428.1 mouse_genomes_project 14 16153349 16154701 - A830039N20Rik lincRNA lincRNA MGP_WSBEiJ_T0038190.1 MGP_WSBEiJ_G0020538.1 mouse_genomes_project 14 41084141 41091390 - MGP_WSBEiJ_P0038190 Dlgap5 protein_coding protein_coding MGP_WSBEiJ_T0038191.1 MGP_WSBEiJ_G0020538.1 mouse_genomes_project 14 41084363 41117496 - MGP_WSBEiJ_P0038191 Dlgap5 protein_coding protein_coding MGP_WSBEiJ_T0038192.1 MGP_WSBEiJ_G0020538.1 mouse_genomes_project 14 41085833 41117519 - Dlgap5 protein_coding retained_intron MGP_WSBEiJ_T0038193.1 MGP_WSBEiJ_G0020538.1 mouse_genomes_project 14 41086953 41117549 - Dlgap5 protein_coding retained_intron MGP_WSBEiJ_T0038194.1 MGP_WSBEiJ_G0020538.1 mouse_genomes_project 14 41090985 41093102 - Dlgap5 protein_coding retained_intron MGP_WSBEiJ_T0038195.1 MGP_WSBEiJ_G0020538.1 mouse_genomes_project 14 41095646 41111082 - MGP_WSBEiJ_P0038195 Dlgap5 protein_coding protein_coding MGP_WSBEiJ_T0038196.1 MGP_WSBEiJ_G0020538.1 mouse_genomes_project 14 41112938 41117542 - Dlgap5 protein_coding retained_intron MGP_WSBEiJ_T0038197.1 MGP_WSBEiJ_G0020538.1 mouse_genomes_project 14 41113470 41115855 - Dlgap5 protein_coding processed_transcript MGP_WSBEiJ_T0038757.1 MGP_WSBEiJ_G0020699.1 mouse_genomes_project 14 50379955 50382648 - MGP_WSBEiJ_P0038757 Ctsg protein_coding protein_coding MGP_WSBEiJ_T0038270.1 MGP_WSBEiJ_G0020556.1 mouse_genomes_project 14 43983294 43984230 - MGP_WSBEiJ_P0038270 Olfr728 protein_coding protein_coding MGP_WSBEiJ_T0012744.1 MGP_WSBEiJ_G0010874.1 mouse_genomes_project 14 95365015 95365448 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003493.1 MGP_WSBEiJ_G0003176.1 mouse_genomes_project 14 58307820 58312653 - Gm15918 antisense antisense MGP_WSBEiJ_T0006561.1 MGP_WSBEiJ_G0005430.1 mouse_genomes_project 14 17544208 17548597 + 4931403M11Rik lincRNA lincRNA MGP_WSBEiJ_T0012696.1 MGP_WSBEiJ_G0010826.1 mouse_genomes_project 14 18851841 18853030 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038760.1 MGP_WSBEiJ_G0020702.1 mouse_genomes_project 14 50486956 50503688 - MGP_WSBEiJ_P0038760 Gzmn protein_coding protein_coding MGP_WSBEiJ_T0037765.1 MGP_WSBEiJ_G0020413.1 mouse_genomes_project 14 23108865 23115654 + MGP_WSBEiJ_P0037765 Selk protein_coding protein_coding MGP_WSBEiJ_T0037766.1 MGP_WSBEiJ_G0020413.1 mouse_genomes_project 14 23108993 23114165 + Selk protein_coding processed_transcript MGP_WSBEiJ_T0003511.1 MGP_WSBEiJ_G0003189.1 mouse_genomes_project 14 99979784 99986243 - Slain1os antisense antisense MGP_WSBEiJ_T0009836.1 MGP_WSBEiJ_G0007993.1 mouse_genomes_project 14 52226952 52227016 + Mir3077 miRNA miRNA MGP_WSBEiJ_T0006577.1 MGP_WSBEiJ_G0005440.1 mouse_genomes_project 14 25965178 25967045 + Gm28651 lincRNA lincRNA MGP_WSBEiJ_T0039356.1 MGP_WSBEiJ_G0020930.1 mouse_genomes_project 14 95373174 95387915 + MGP_WSBEiJ_P0039356 Klf5 protein_coding protein_coding MGP_WSBEiJ_T0000876.1 MGP_WSBEiJ_G0000814.1 mouse_genomes_project 14 14805122 14808783 + TEC TEC MGP_WSBEiJ_T0038576.1 MGP_WSBEiJ_G0020648.1 mouse_genomes_project 14 49174128 49176705 + MGP_WSBEiJ_P0038576 Cmtm5 protein_coding protein_coding MGP_WSBEiJ_T0011178.1 MGP_WSBEiJ_G0009335.1 mouse_genomes_project 14 56236989 56237126 + Gm27972 misc_RNA misc_RNA MGP_WSBEiJ_T0006585.1 MGP_WSBEiJ_G0005447.1 mouse_genomes_project 14 40220813 40227573 - Rubie lincRNA lincRNA MGP_WSBEiJ_T0039287.1 MGP_WSBEiJ_G0020896.1 mouse_genomes_project 14 72156960 72734726 + MGP_WSBEiJ_P0039287 Enox1 protein_coding protein_coding MGP_WSBEiJ_T0099083.1 MGP_WSBEiJ_G0037746.1 mouse_genomes_project 14 24208811 24208890 - Gm24916 snoRNA snoRNA MGP_WSBEiJ_T0002581.1 MGP_WSBEiJ_G0002479.1 mouse_genomes_project 14 47032889 47038089 + MGP_WSBEiJ_P0002581 TR_V_gene TR_V_gene MGP_WSBEiJ_T0006580.1 MGP_WSBEiJ_G0005442.1 mouse_genomes_project 14 33186127 33221122 + 1700109I08Rik lincRNA lincRNA MGP_WSBEiJ_T0038355.1 MGP_WSBEiJ_G0020597.1 mouse_genomes_project 14 46050060 46052006 + MGP_WSBEiJ_P0038355 Tppp2 protein_coding protein_coding MGP_WSBEiJ_T0038356.1 MGP_WSBEiJ_G0020597.1 mouse_genomes_project 14 46050084 46052006 + MGP_WSBEiJ_P0038356 Tppp2 protein_coding protein_coding MGP_WSBEiJ_T0006608.1 MGP_WSBEiJ_G0005463.1 mouse_genomes_project 14 56237302 56255672 + Gm27017 lincRNA lincRNA MGP_WSBEiJ_T0038982.1 MGP_WSBEiJ_G0020792.1 mouse_genomes_project 14 60143614 60169320 - MGP_WSBEiJ_P0038982 Pnoc protein_coding protein_coding MGP_WSBEiJ_T0002510.1 MGP_WSBEiJ_G0002420.1 mouse_genomes_project 14 48420065 48420131 + MGP_WSBEiJ_P0002510 Traj3 TR_J_gene TR_J_gene MGP_WSBEiJ_T0037735.1 MGP_WSBEiJ_G0020401.1 mouse_genomes_project 14 19735760 19938475 + MGP_WSBEiJ_P0037735 Dnah12 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037736.1 MGP_WSBEiJ_G0020401.1 mouse_genomes_project 14 19737435 19863811 + MGP_WSBEiJ_P0037736 Dnah12 protein_coding protein_coding MGP_WSBEiJ_T0037737.1 MGP_WSBEiJ_G0020401.1 mouse_genomes_project 14 19812775 19815522 + MGP_WSBEiJ_P0037737 Dnah12 protein_coding protein_coding MGP_WSBEiJ_T0037738.1 MGP_WSBEiJ_G0020401.1 mouse_genomes_project 14 19878567 19938544 + MGP_WSBEiJ_P0037738 Dnah12 protein_coding protein_coding MGP_WSBEiJ_T0038524.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853003 48864506 - MGP_WSBEiJ_P0038524 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038525.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853003 48864478 - MGP_WSBEiJ_P0038525 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038526.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853003 48900047 - MGP_WSBEiJ_P0038526 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038527.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853003 48864427 - MGP_WSBEiJ_P0038527 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038528.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853004 48899869 - MGP_WSBEiJ_P0038528 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038529.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853004 48864512 - MGP_WSBEiJ_P0038529 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038530.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853009 48864493 - MGP_WSBEiJ_P0038530 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038531.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853571 48900047 - MGP_WSBEiJ_P0038531 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038532.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853571 48864049 - MGP_WSBEiJ_P0038532 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038533.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48853745 48855381 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0038534.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48854131 48855055 - MGP_WSBEiJ_P0038534 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038535.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48855099 48856700 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0038536.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48855573 48859380 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0038537.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48855833 48856881 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0038538.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48856047 48861068 - Acin1 protein_coding processed_transcript MGP_WSBEiJ_T0038539.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48856139 48859144 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0038540.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48856575 48864496 - MGP_WSBEiJ_P0038540 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038541.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48857389 48860702 - Acin1 protein_coding processed_transcript MGP_WSBEiJ_T0038542.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48861594 48864492 - Acin1 protein_coding processed_transcript MGP_WSBEiJ_T0038543.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48861647 48864492 - Acin1 protein_coding processed_transcript MGP_WSBEiJ_T0038544.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48862209 48875213 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0038545.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48862323 48864502 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0038546.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48873301 48876180 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0038547.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48876628 48899176 - MGP_WSBEiJ_P0038547 Acin1 protein_coding protein_coding MGP_WSBEiJ_T0038548.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48888783 48899749 - Acin1 protein_coding processed_transcript MGP_WSBEiJ_T0038549.1 MGP_WSBEiJ_G0020636.1 mouse_genomes_project 14 48892295 48899731 - Acin1 protein_coding retained_intron MGP_WSBEiJ_T0002462.1 MGP_WSBEiJ_G0002374.1 mouse_genomes_project 14 48360393 48360456 + MGP_WSBEiJ_P0002462 Traj56 TR_J_gene TR_J_gene MGP_WSBEiJ_T0011172.1 MGP_WSBEiJ_G0009329.1 mouse_genomes_project 14 33855442 33855621 - Gm22726 misc_RNA misc_RNA MGP_WSBEiJ_T0038755.1 MGP_WSBEiJ_G0020697.1 mouse_genomes_project 14 50347615 50350116 - MGP_WSBEiJ_P0038755 Cma2 protein_coding protein_coding MGP_WSBEiJ_T0002550.1 MGP_WSBEiJ_G0002454.1 mouse_genomes_project 14 46728359 46729213 + MGP_WSBEiJ_P0002550 Trav2 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002551.1 MGP_WSBEiJ_G0002454.1 mouse_genomes_project 14 46728454 46729213 + MGP_WSBEiJ_P0002551 Trav2 TR_V_gene TR_V_gene MGP_WSBEiJ_T0037916.1 MGP_WSBEiJ_G0020445.1 mouse_genomes_project 14 24705321 24720097 + MGP_WSBEiJ_P0037916 Eaf1 protein_coding protein_coding MGP_WSBEiJ_T0039478.1 MGP_WSBEiJ_G0020972.1 mouse_genomes_project 14 117401859 117566740 + MGP_WSBEiJ_P0039478 Mbnl2 protein_coding protein_coding MGP_WSBEiJ_T0039479.1 MGP_WSBEiJ_G0020972.1 mouse_genomes_project 14 117401859 117566740 + MGP_WSBEiJ_P0039479 Mbnl2 protein_coding protein_coding MGP_WSBEiJ_T0039480.1 MGP_WSBEiJ_G0020972.1 mouse_genomes_project 14 117454406 117564006 + MGP_WSBEiJ_P0039480 Mbnl2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012713.1 MGP_WSBEiJ_G0010843.1 mouse_genomes_project 14 44548678 44548961 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000900.1 MGP_WSBEiJ_G0000838.1 mouse_genomes_project 14 111730823 111731087 - TEC TEC MGP_WSBEiJ_T0039315.1 MGP_WSBEiJ_G0020913.1 mouse_genomes_project 14 74706604 74749862 + MGP_WSBEiJ_P0039315 Sugt1 protein_coding protein_coding MGP_WSBEiJ_T0006606.1 MGP_WSBEiJ_G0005461.1 mouse_genomes_project 14 55013806 55131855 + Gm29266 lincRNA lincRNA MGP_WSBEiJ_T0038763.1 MGP_WSBEiJ_G0020705.1 mouse_genomes_project 14 50590630 50594035 - MGP_WSBEiJ_P0038763 Gzmb protein_coding protein_coding MGP_WSBEiJ_T0038272.1 MGP_WSBEiJ_G0020558.1 mouse_genomes_project 14 44036680 44037637 - MGP_WSBEiJ_P0038272 protein_coding protein_coding MGP_WSBEiJ_T0039035.1 MGP_WSBEiJ_G0020809.1 mouse_genomes_project 14 61598329 61607544 + MGP_WSBEiJ_P0039035 Gm10032 protein_coding protein_coding MGP_WSBEiJ_T0038100.1 MGP_WSBEiJ_G0020506.1 mouse_genomes_project 14 34343482 34430434 - MGP_WSBEiJ_P0038100 Sh2d4b protein_coding protein_coding MGP_WSBEiJ_T0039147.1 MGP_WSBEiJ_G0020855.1 mouse_genomes_project 14 65310014 65312523 + Hr protein_coding processed_transcript MGP_WSBEiJ_T0039148.1 MGP_WSBEiJ_G0020855.1 mouse_genomes_project 14 65310018 65330716 + MGP_WSBEiJ_P0039148 Hr protein_coding unknown_likely_coding MGP_WSBEiJ_T0039149.1 MGP_WSBEiJ_G0020855.1 mouse_genomes_project 14 65310047 65312469 + Hr protein_coding processed_transcript MGP_WSBEiJ_T0039150.1 MGP_WSBEiJ_G0020855.1 mouse_genomes_project 14 65313703 65330710 + MGP_WSBEiJ_P0039150 Hr protein_coding protein_coding MGP_WSBEiJ_T0009864.1 MGP_WSBEiJ_G0008021.1 mouse_genomes_project 14 111952391 111952498 + Mir20a miRNA miRNA MGP_WSBEiJ_T0003483.1 MGP_WSBEiJ_G0003170.1 mouse_genomes_project 14 50960269 50975397 - Gm16573 antisense antisense MGP_WSBEiJ_T0003484.1 MGP_WSBEiJ_G0003170.1 mouse_genomes_project 14 50965676 50975413 - Gm16573 antisense antisense MGP_WSBEiJ_T0003485.1 MGP_WSBEiJ_G0003170.1 mouse_genomes_project 14 50972414 50975413 - Gm16573 antisense antisense MGP_WSBEiJ_T0038466.1 MGP_WSBEiJ_G0020617.1 mouse_genomes_project 14 46656256 46661980 - MGP_WSBEiJ_P0038466 Olfr1507 protein_coding protein_coding MGP_WSBEiJ_T0038467.1 MGP_WSBEiJ_G0020617.1 mouse_genomes_project 14 46656256 46657368 - MGP_WSBEiJ_P0038467 Olfr1507 protein_coding protein_coding MGP_WSBEiJ_T0038468.1 MGP_WSBEiJ_G0020617.1 mouse_genomes_project 14 46656799 46661582 - MGP_WSBEiJ_P0038468 Olfr1507 protein_coding protein_coding MGP_WSBEiJ_T0038469.1 MGP_WSBEiJ_G0020617.1 mouse_genomes_project 14 46656811 46661976 - MGP_WSBEiJ_P0038469 Olfr1507 protein_coding protein_coding MGP_WSBEiJ_T0038470.1 MGP_WSBEiJ_G0020617.1 mouse_genomes_project 14 46656820 46661610 - MGP_WSBEiJ_P0038470 Olfr1507 protein_coding protein_coding MGP_WSBEiJ_T0038471.1 MGP_WSBEiJ_G0020617.1 mouse_genomes_project 14 46657216 46661974 - MGP_WSBEiJ_P0038471 Olfr1507 protein_coding protein_coding MGP_WSBEiJ_T0100016.1 MGP_WSBEiJ_G0038653.1 mouse_genomes_project 14 49287813 49292249 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100017.1 MGP_WSBEiJ_G0038653.1 mouse_genomes_project 14 49291093 49292072 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0039078.1 MGP_WSBEiJ_G0020827.1 mouse_genomes_project 14 64096350 64100391 + MGP_WSBEiJ_P0039078 Nkx3-1 protein_coding protein_coding MGP_WSBEiJ_T0037644.1 MGP_WSBEiJ_G0020377.1 mouse_genomes_project 14 17027097 17143030 - MGP_WSBEiJ_P0037644 Dlg5 protein_coding protein_coding MGP_WSBEiJ_T0037645.1 MGP_WSBEiJ_G0020377.1 mouse_genomes_project 14 17027097 17039353 - MGP_WSBEiJ_P0037645 Dlg5 protein_coding protein_coding MGP_WSBEiJ_T0037646.1 MGP_WSBEiJ_G0020377.1 mouse_genomes_project 14 17027097 17072152 - MGP_WSBEiJ_P0037646 Dlg5 protein_coding protein_coding MGP_WSBEiJ_T0037647.1 MGP_WSBEiJ_G0020377.1 mouse_genomes_project 14 17027099 17143030 - MGP_WSBEiJ_P0037647 Dlg5 protein_coding protein_coding MGP_WSBEiJ_T0037648.1 MGP_WSBEiJ_G0020377.1 mouse_genomes_project 14 17037552 17043577 - MGP_WSBEiJ_P0037648 Dlg5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037649.1 MGP_WSBEiJ_G0020377.1 mouse_genomes_project 14 17039445 17041929 - Dlg5 protein_coding retained_intron MGP_WSBEiJ_T0037650.1 MGP_WSBEiJ_G0020377.1 mouse_genomes_project 14 17047260 17050323 - Dlg5 protein_coding retained_intron MGP_WSBEiJ_T0037651.1 MGP_WSBEiJ_G0020377.1 mouse_genomes_project 14 17084871 17141976 - MGP_WSBEiJ_P0037651 Dlg5 protein_coding protein_coding MGP_WSBEiJ_T0099116.1 MGP_WSBEiJ_G0037779.1 mouse_genomes_project 14 90802083 90802209 + Gm24680 snoRNA snoRNA MGP_WSBEiJ_T0096955.1 MGP_WSBEiJ_G0035636.1 mouse_genomes_project 14 22135446 22135550 - Gm23999 rRNA rRNA MGP_WSBEiJ_T0099121.1 MGP_WSBEiJ_G0037784.1 mouse_genomes_project 14 96560430 96560562 + Gm26367 snoRNA snoRNA MGP_WSBEiJ_T0037728.1 MGP_WSBEiJ_G0020399.1 mouse_genomes_project 14 19682737 19703011 + MGP_WSBEiJ_P0037728 Arf4 protein_coding protein_coding MGP_WSBEiJ_T0037729.1 MGP_WSBEiJ_G0020399.1 mouse_genomes_project 14 19682889 19702554 + MGP_WSBEiJ_P0037729 Arf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037730.1 MGP_WSBEiJ_G0020399.1 mouse_genomes_project 14 19682916 19702561 + Arf4 protein_coding processed_transcript MGP_WSBEiJ_T0037731.1 MGP_WSBEiJ_G0020399.1 mouse_genomes_project 14 19683010 19702567 + MGP_WSBEiJ_P0037731 Arf4 protein_coding protein_coding MGP_WSBEiJ_T0037732.1 MGP_WSBEiJ_G0020399.1 mouse_genomes_project 14 19698761 19699608 + Arf4 protein_coding retained_intron MGP_WSBEiJ_T0037733.1 MGP_WSBEiJ_G0020399.1 mouse_genomes_project 14 19698881 19710878 + MGP_WSBEiJ_P0037733 Arf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038756.1 MGP_WSBEiJ_G0020698.1 mouse_genomes_project 14 50362398 50365433 - MGP_WSBEiJ_P0038756 Mcpt8 protein_coding protein_coding MGP_WSBEiJ_T0002503.1 MGP_WSBEiJ_G0002413.1 mouse_genomes_project 14 48409326 48409384 + MGP_WSBEiJ_P0002503 Traj12 TR_J_gene TR_J_gene MGP_WSBEiJ_T0009858.1 MGP_WSBEiJ_G0008015.1 mouse_genomes_project 14 99932915 99933020 - Gm22877 miRNA miRNA MGP_WSBEiJ_T0038858.1 MGP_WSBEiJ_G0020738.1 mouse_genomes_project 14 54134544 54140914 + MGP_WSBEiJ_P0038858 Shisa2 protein_coding protein_coding MGP_WSBEiJ_T0039038.1 MGP_WSBEiJ_G0020812.1 mouse_genomes_project 14 61736445 61746879 + MGP_WSBEiJ_P0039038 Pnma2 protein_coding protein_coding MGP_WSBEiJ_T0039039.1 MGP_WSBEiJ_G0020812.1 mouse_genomes_project 14 61736483 61745640 + MGP_WSBEiJ_P0039039 Pnma2 protein_coding protein_coding MGP_WSBEiJ_T0039040.1 MGP_WSBEiJ_G0020812.1 mouse_genomes_project 14 61736517 61741546 + Pnma2 protein_coding processed_transcript MGP_WSBEiJ_T0039041.1 MGP_WSBEiJ_G0020812.1 mouse_genomes_project 14 61741135 61742836 + Pnma2 protein_coding processed_transcript MGP_WSBEiJ_T0038271.1 MGP_WSBEiJ_G0020557.1 mouse_genomes_project 14 43991510 43992482 - MGP_WSBEiJ_P0038271 Olfr729 protein_coding protein_coding MGP_WSBEiJ_T0039316.1 MGP_WSBEiJ_G0020914.1 mouse_genomes_project 14 74759418 74783712 - MGP_WSBEiJ_P0039316 Lect1 protein_coding protein_coding MGP_WSBEiJ_T0039317.1 MGP_WSBEiJ_G0020914.1 mouse_genomes_project 14 74759421 74783798 - MGP_WSBEiJ_P0039317 Lect1 protein_coding protein_coding MGP_WSBEiJ_T0039318.1 MGP_WSBEiJ_G0020914.1 mouse_genomes_project 14 74759544 74763922 - Lect1 protein_coding retained_intron MGP_WSBEiJ_T0039319.1 MGP_WSBEiJ_G0020914.1 mouse_genomes_project 14 74763203 74767238 - Lect1 protein_coding processed_transcript MGP_WSBEiJ_T0039320.1 MGP_WSBEiJ_G0020914.1 mouse_genomes_project 14 74763713 74767386 - Lect1 protein_coding retained_intron MGP_WSBEiJ_T0038386.1 MGP_WSBEiJ_G0020602.1 mouse_genomes_project 14 46176352 46178259 - MGP_WSBEiJ_P0038386 Olfr221 protein_coding protein_coding MGP_WSBEiJ_T0002448.1 MGP_WSBEiJ_G0002363.1 mouse_genomes_project 14 48319699 48319710 + Trdd1 TR_D_gene processed_transcript MGP_WSBEiJ_T0002449.1 MGP_WSBEiJ_G0002363.1 mouse_genomes_project 14 48319699 48319708 + MGP_WSBEiJ_P0002449 Trdd1 TR_D_gene TR_D_gene MGP_WSBEiJ_T0037987.1 MGP_WSBEiJ_G0020458.1 mouse_genomes_project 14 25585234 25612589 + MGP_WSBEiJ_P0037987 Ogdhl protein_coding unknown_likely_coding MGP_WSBEiJ_T0037988.1 MGP_WSBEiJ_G0020458.1 mouse_genomes_project 14 25585265 25612278 + MGP_WSBEiJ_P0037988 Ogdhl protein_coding protein_coding MGP_WSBEiJ_T0038717.1 MGP_WSBEiJ_G0020675.1 mouse_genomes_project 14 49927672 49930302 - MGP_WSBEiJ_P0038717 Mdp1 protein_coding protein_coding MGP_WSBEiJ_T0039434.1 MGP_WSBEiJ_G0020952.1 mouse_genomes_project 14 102430598 102433667 + MGP_WSBEiJ_P0039434 Trim52 protein_coding protein_coding MGP_WSBEiJ_T0039435.1 MGP_WSBEiJ_G0020952.1 mouse_genomes_project 14 102430599 102455616 + Trim52 protein_coding processed_transcript MGP_WSBEiJ_T0099075.1 MGP_WSBEiJ_G0037738.1 mouse_genomes_project 14 2848731 2848931 + Gm22053 snoRNA snoRNA MGP_WSBEiJ_T0002487.1 MGP_WSBEiJ_G0002397.1 mouse_genomes_project 14 48392553 48392613 + MGP_WSBEiJ_P0002487 Traj29 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038293.1 MGP_WSBEiJ_G0020575.1 mouse_genomes_project 14 44755446 44803368 - MGP_WSBEiJ_P0038293 Tep1 protein_coding protein_coding MGP_WSBEiJ_T0039021.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139858 61152333 + MGP_WSBEiJ_P0039021 Stmn4 protein_coding protein_coding MGP_WSBEiJ_T0039022.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139866 61157298 + MGP_WSBEiJ_P0039022 Stmn4 protein_coding protein_coding MGP_WSBEiJ_T0039023.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139929 61151430 + Stmn4 protein_coding retained_intron MGP_WSBEiJ_T0039024.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139929 61151219 + Stmn4 protein_coding processed_transcript MGP_WSBEiJ_T0039025.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139935 61157292 + MGP_WSBEiJ_P0039025 Stmn4 protein_coding protein_coding MGP_WSBEiJ_T0039026.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139936 61157292 + MGP_WSBEiJ_P0039026 Stmn4 protein_coding protein_coding MGP_WSBEiJ_T0039027.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139937 61157266 + MGP_WSBEiJ_P0039027 Stmn4 protein_coding protein_coding MGP_WSBEiJ_T0039028.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139940 61152338 + MGP_WSBEiJ_P0039028 Stmn4 protein_coding protein_coding MGP_WSBEiJ_T0039029.1 MGP_WSBEiJ_G0020807.1 mouse_genomes_project 14 61139943 61153678 + Stmn4 protein_coding retained_intron MGP_WSBEiJ_T0039483.1 MGP_WSBEiJ_G0020974.1 mouse_genomes_project 14 118059497 118096433 + MGP_WSBEiJ_P0039483 Ipo5 protein_coding protein_coding MGP_WSBEiJ_T0012721.1 MGP_WSBEiJ_G0010851.1 mouse_genomes_project 14 50581993 50583002 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038226.1 MGP_WSBEiJ_G0020542.1 mouse_genomes_project 14 41871240 42015398 + MGP_WSBEiJ_P0038226 Peli2 protein_coding protein_coding MGP_WSBEiJ_T0037671.1 MGP_WSBEiJ_G0020383.1 mouse_genomes_project 14 18617349 18670726 - MGP_WSBEiJ_P0037671 Zcchc24 protein_coding protein_coding MGP_WSBEiJ_T0037672.1 MGP_WSBEiJ_G0020383.1 mouse_genomes_project 14 18617351 18625499 - Zcchc24 protein_coding retained_intron MGP_WSBEiJ_T0003440.1 MGP_WSBEiJ_G0003138.1 mouse_genomes_project 14 3096107 3128649 + Fhitos antisense antisense MGP_WSBEiJ_T0038853.1 MGP_WSBEiJ_G0020737.1 mouse_genomes_project 14 54069828 54105659 - MGP_WSBEiJ_P0038853 Cdadc1 protein_coding protein_coding MGP_WSBEiJ_T0038854.1 MGP_WSBEiJ_G0020737.1 mouse_genomes_project 14 54069828 54105659 - MGP_WSBEiJ_P0038854 Cdadc1 protein_coding protein_coding MGP_WSBEiJ_T0038855.1 MGP_WSBEiJ_G0020737.1 mouse_genomes_project 14 54073420 54105659 - MGP_WSBEiJ_P0038855 Cdadc1 protein_coding protein_coding MGP_WSBEiJ_T0038856.1 MGP_WSBEiJ_G0020737.1 mouse_genomes_project 14 54076657 54105659 - MGP_WSBEiJ_P0038856 Cdadc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038857.1 MGP_WSBEiJ_G0020737.1 mouse_genomes_project 14 54076658 54105659 - MGP_WSBEiJ_P0038857 Cdadc1 protein_coding protein_coding MGP_WSBEiJ_T0038505.1 MGP_WSBEiJ_G0020626.1 mouse_genomes_project 14 48685560 48689869 + MGP_WSBEiJ_P0038505 Rem2 protein_coding protein_coding MGP_WSBEiJ_T0038506.1 MGP_WSBEiJ_G0020626.1 mouse_genomes_project 14 48685701 48687356 + Rem2 protein_coding retained_intron MGP_WSBEiJ_T0038507.1 MGP_WSBEiJ_G0020626.1 mouse_genomes_project 14 48685713 48689115 + MGP_WSBEiJ_P0038507 Rem2 protein_coding protein_coding MGP_WSBEiJ_T0038508.1 MGP_WSBEiJ_G0020626.1 mouse_genomes_project 14 48686932 48688553 + MGP_WSBEiJ_P0038508 Rem2 protein_coding protein_coding MGP_WSBEiJ_T0037612.1 MGP_WSBEiJ_G0020372.1 mouse_genomes_project 14 14635227 14646950 + MGP_WSBEiJ_P0037612 Vdac2 protein_coding protein_coding MGP_WSBEiJ_T0037613.1 MGP_WSBEiJ_G0020372.1 mouse_genomes_project 14 14635459 14651796 + MGP_WSBEiJ_P0037613 Vdac2 protein_coding protein_coding MGP_WSBEiJ_T0037614.1 MGP_WSBEiJ_G0020372.1 mouse_genomes_project 14 14635682 14643120 + MGP_WSBEiJ_P0037614 Vdac2 protein_coding protein_coding MGP_WSBEiJ_T0037615.1 MGP_WSBEiJ_G0020372.1 mouse_genomes_project 14 14637573 14643314 + Vdac2 protein_coding processed_transcript MGP_WSBEiJ_T0037616.1 MGP_WSBEiJ_G0020372.1 mouse_genomes_project 14 14643036 14647058 + Vdac2 protein_coding retained_intron MGP_WSBEiJ_T0037617.1 MGP_WSBEiJ_G0020372.1 mouse_genomes_project 14 14643133 14644150 + Vdac2 protein_coding retained_intron MGP_WSBEiJ_T0037618.1 MGP_WSBEiJ_G0020372.1 mouse_genomes_project 14 14648779 14652078 + Vdac2 protein_coding retained_intron MGP_WSBEiJ_T0038319.1 MGP_WSBEiJ_G0020582.1 mouse_genomes_project 14 44939914 44942922 + MGP_WSBEiJ_P0038319 Rnase10 protein_coding protein_coding MGP_WSBEiJ_T0038320.1 MGP_WSBEiJ_G0020582.1 mouse_genomes_project 14 44940092 44942922 + MGP_WSBEiJ_P0038320 Rnase10 protein_coding protein_coding MGP_WSBEiJ_T0037452.1 MGP_WSBEiJ_G0020324.1 mouse_genomes_project 14 6801397 6810383 + MGP_WSBEiJ_P0037452 Il3ra protein_coding protein_coding MGP_WSBEiJ_T0039066.1 MGP_WSBEiJ_G0020818.1 mouse_genomes_project 14 62628916 62633113 + MGP_WSBEiJ_P0039066 Gnrh1 protein_coding protein_coding MGP_WSBEiJ_T0006599.1 MGP_WSBEiJ_G0005455.1 mouse_genomes_project 14 46127190 46130659 - Gm16617 lincRNA lincRNA MGP_WSBEiJ_T0002651.1 MGP_WSBEiJ_G0002535.1 mouse_genomes_project 14 46761529 46762028 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0002470.1 MGP_WSBEiJ_G0002380.1 mouse_genomes_project 14 48372840 48372897 + MGP_WSBEiJ_P0002470 Traj47 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038820.1 MGP_WSBEiJ_G0020725.1 mouse_genomes_project 14 52235092 52254679 - MGP_WSBEiJ_P0038820 Ska3 protein_coding protein_coding MGP_WSBEiJ_T0006600.1 MGP_WSBEiJ_G0005456.1 mouse_genomes_project 14 46353917 46371228 + Gm26590 lincRNA lincRNA MGP_WSBEiJ_T0038561.1 MGP_WSBEiJ_G0020642.1 mouse_genomes_project 14 49116119 49120955 + MGP_WSBEiJ_P0038561 Bcl2l2 protein_coding protein_coding MGP_WSBEiJ_T0038562.1 MGP_WSBEiJ_G0020642.1 mouse_genomes_project 14 49116123 49116802 + Bcl2l2 protein_coding retained_intron MGP_WSBEiJ_T0038564.1 MGP_WSBEiJ_G0020642.1 mouse_genomes_project 14 49116198 49118274 + MGP_WSBEiJ_P0038564 Bcl2l2 protein_coding protein_coding MGP_WSBEiJ_T0038565.1 MGP_WSBEiJ_G0020642.1 mouse_genomes_project 14 49116249 49120816 + MGP_WSBEiJ_P0038565 Bcl2l2 protein_coding protein_coding MGP_WSBEiJ_T0006566.1 MGP_WSBEiJ_G0005434.1 mouse_genomes_project 14 18447109 18453423 - Gm26772 lincRNA lincRNA MGP_WSBEiJ_T0039252.1 MGP_WSBEiJ_G0020886.1 mouse_genomes_project 14 70695592 70721031 - MGP_WSBEiJ_P0039252 Slc25a30 protein_coding protein_coding MGP_WSBEiJ_T0038094.1 MGP_WSBEiJ_G0020504.1 mouse_genomes_project 14 30581770 30598481 - MGP_WSBEiJ_P0038094 Ghitm protein_coding protein_coding MGP_WSBEiJ_T0038095.1 MGP_WSBEiJ_G0020504.1 mouse_genomes_project 14 30581770 30598664 - MGP_WSBEiJ_P0038095 Ghitm protein_coding protein_coding MGP_WSBEiJ_T0012682.1 MGP_WSBEiJ_G0010812.1 mouse_genomes_project 14 100787 101610 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039042.1 MGP_WSBEiJ_G0020813.1 mouse_genomes_project 14 61820591 61850652 - MGP_WSBEiJ_P0039042 protein_coding protein_coding MGP_WSBEiJ_T0039043.1 MGP_WSBEiJ_G0020813.1 mouse_genomes_project 14 61820591 61850631 - MGP_WSBEiJ_P0039043 protein_coding protein_coding MGP_WSBEiJ_T0039044.1 MGP_WSBEiJ_G0020813.1 mouse_genomes_project 14 61822625 61825381 - protein_coding processed_transcript MGP_WSBEiJ_T0039045.1 MGP_WSBEiJ_G0020813.1 mouse_genomes_project 14 61824607 61837869 - protein_coding processed_transcript MGP_WSBEiJ_T0039046.1 MGP_WSBEiJ_G0020813.1 mouse_genomes_project 14 61824786 61838472 - protein_coding processed_transcript MGP_WSBEiJ_T0039047.1 MGP_WSBEiJ_G0020813.1 mouse_genomes_project 14 61824795 61835264 - protein_coding processed_transcript MGP_WSBEiJ_T0039048.1 MGP_WSBEiJ_G0020813.1 mouse_genomes_project 14 61829087 61835196 - protein_coding retained_intron MGP_WSBEiJ_T0038463.1 MGP_WSBEiJ_G0020616.1 mouse_genomes_project 14 46631772 46636515 - MGP_WSBEiJ_P0038463 Olfr1508 protein_coding protein_coding MGP_WSBEiJ_T0038464.1 MGP_WSBEiJ_G0020616.1 mouse_genomes_project 14 46632126 46636549 - MGP_WSBEiJ_P0038464 Olfr1508 protein_coding protein_coding MGP_WSBEiJ_T0038465.1 MGP_WSBEiJ_G0020616.1 mouse_genomes_project 14 46632594 46636144 - MGP_WSBEiJ_P0038465 Olfr1508 protein_coding protein_coding MGP_WSBEiJ_T0012720.1 MGP_WSBEiJ_G0010850.1 mouse_genomes_project 14 50287470 50288221 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039105.1 MGP_WSBEiJ_G0020839.1 mouse_genomes_project 14 64551026 64788248 + MGP_WSBEiJ_P0039105 Pebp4 protein_coding protein_coding MGP_WSBEiJ_T0099086.1 MGP_WSBEiJ_G0037749.1 mouse_genomes_project 14 26518870 26518999 + Gm25498 snoRNA snoRNA MGP_WSBEiJ_T0037744.1 MGP_WSBEiJ_G0020403.1 mouse_genomes_project 14 19970220 20024843 - MGP_WSBEiJ_P0037744 Appl1 protein_coding protein_coding MGP_WSBEiJ_T0037745.1 MGP_WSBEiJ_G0020403.1 mouse_genomes_project 14 20003298 20010270 - Appl1 protein_coding retained_intron MGP_WSBEiJ_T0037746.1 MGP_WSBEiJ_G0020403.1 mouse_genomes_project 14 20004595 20024110 - Appl1 protein_coding retained_intron MGP_WSBEiJ_T0037747.1 MGP_WSBEiJ_G0020403.1 mouse_genomes_project 14 20016217 20024073 - Appl1 protein_coding retained_intron MGP_WSBEiJ_T0002657.1 MGP_WSBEiJ_G0002541.1 mouse_genomes_project 14 47416370 47416640 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0097873.1 MGP_WSBEiJ_G0036536.1 mouse_genomes_project 14 101585376 101585484 - Gm24207 snRNA snRNA MGP_WSBEiJ_T0012701.1 MGP_WSBEiJ_G0010831.1 mouse_genomes_project 14 22346908 22347400 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039348.1 MGP_WSBEiJ_G0020925.1 mouse_genomes_project 14 93773046 94180041 - MGP_WSBEiJ_P0039348 Dach1 protein_coding protein_coding MGP_WSBEiJ_T0039349.1 MGP_WSBEiJ_G0020925.1 mouse_genomes_project 14 93773046 94180041 - MGP_WSBEiJ_P0039349 Dach1 protein_coding protein_coding MGP_WSBEiJ_T0039350.1 MGP_WSBEiJ_G0020925.1 mouse_genomes_project 14 93818211 94180190 - Dach1 protein_coding retained_intron MGP_WSBEiJ_T0038923.1 MGP_WSBEiJ_G0020767.1 mouse_genomes_project 14 57707777 57709401 + MGP_WSBEiJ_P0038923 Defb42 protein_coding protein_coding MGP_WSBEiJ_T0038924.1 MGP_WSBEiJ_G0020767.1 mouse_genomes_project 14 57707815 57719862 + Defb42 protein_coding processed_transcript MGP_WSBEiJ_T0038925.1 MGP_WSBEiJ_G0020767.1 mouse_genomes_project 14 57707880 57709349 + MGP_WSBEiJ_P0038925 Defb42 protein_coding protein_coding MGP_WSBEiJ_T0038926.1 MGP_WSBEiJ_G0020767.1 mouse_genomes_project 14 57709019 57709366 + MGP_WSBEiJ_P0038926 Defb42 protein_coding protein_coding MGP_WSBEiJ_T0038927.1 MGP_WSBEiJ_G0020767.1 mouse_genomes_project 14 57716790 57718653 + Defb42 protein_coding processed_transcript MGP_WSBEiJ_T0002582.1 MGP_WSBEiJ_G0002480.1 mouse_genomes_project 14 47043098 47043736 + MGP_WSBEiJ_P0002582 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002577.1 MGP_WSBEiJ_G0002475.1 mouse_genomes_project 14 47002221 47002511 + MGP_WSBEiJ_P0002577 TR_V_gene TR_V_gene MGP_WSBEiJ_T0003506.1 MGP_WSBEiJ_G0003185.1 mouse_genomes_project 14 67432093 67446791 + Gm16549 antisense antisense MGP_WSBEiJ_T0002464.1 MGP_WSBEiJ_G0002376.1 mouse_genomes_project 14 48366359 48366425 + MGP_WSBEiJ_P0002464 Traj52 TR_J_gene TR_J_gene MGP_WSBEiJ_T0039229.1 MGP_WSBEiJ_G0020877.1 mouse_genomes_project 14 69912772 69950712 + MGP_WSBEiJ_P0039229 5031414D18Rik protein_coding protein_coding MGP_WSBEiJ_T0002587.1 MGP_WSBEiJ_G0002484.1 mouse_genomes_project 14 47321931 47322459 + MGP_WSBEiJ_P0002587 TR_V_gene TR_V_gene MGP_WSBEiJ_T0037693.1 MGP_WSBEiJ_G0020392.1 mouse_genomes_project 14 18856128 18870009 + MGP_WSBEiJ_P0037693 protein_coding protein_coding MGP_WSBEiJ_T0037696.1 MGP_WSBEiJ_G0020392.1 mouse_genomes_project 14 18856180 18870000 + MGP_WSBEiJ_P0037696 protein_coding protein_coding MGP_WSBEiJ_T0000894.1 MGP_WSBEiJ_G0000832.1 mouse_genomes_project 14 66151597 66152126 - TEC TEC MGP_WSBEiJ_T0016792.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56188878 56270820 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016793.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56189073 56270761 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016794.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56189511 56270749 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016795.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56189628 56237174 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016796.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56189763 56237139 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016797.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56204181 56206769 - Dleu2 processed_transcript TEC MGP_WSBEiJ_T0016798.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56206490 56270772 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016799.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56212222 56237114 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016800.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56214836 56218710 - Dleu2 processed_transcript TEC MGP_WSBEiJ_T0016801.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56215619 56270772 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016802.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56219116 56236974 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016803.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56219166 56237174 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016804.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56222032 56270761 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016805.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56231066 56270760 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0016806.1 MGP_WSBEiJ_G0014690.1 mouse_genomes_project 14 56231140 56270772 - Dleu2 processed_transcript lincRNA MGP_WSBEiJ_T0002656.1 MGP_WSBEiJ_G0002540.1 mouse_genomes_project 14 47371770 47372055 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0038611.1 MGP_WSBEiJ_G0020657.1 mouse_genomes_project 14 49477900 49494475 + MGP_WSBEiJ_P0038611 Dhrs2 protein_coding protein_coding MGP_WSBEiJ_T0038612.1 MGP_WSBEiJ_G0020657.1 mouse_genomes_project 14 49487730 49494288 + MGP_WSBEiJ_P0038612 Dhrs2 protein_coding protein_coding MGP_WSBEiJ_T0038021.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26692040 26765465 - MGP_WSBEiJ_P0038021 Mapk8 protein_coding protein_coding MGP_WSBEiJ_T0038022.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26695200 26765452 - MGP_WSBEiJ_P0038022 Mapk8 protein_coding protein_coding MGP_WSBEiJ_T0038023.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26696256 26765449 - MGP_WSBEiJ_P0038023 Mapk8 protein_coding protein_coding MGP_WSBEiJ_T0038024.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26696321 26726964 - MGP_WSBEiJ_P0038024 Mapk8 protein_coding protein_coding MGP_WSBEiJ_T0038025.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26696456 26705588 - Mapk8 protein_coding processed_transcript MGP_WSBEiJ_T0038026.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26696459 26726947 - MGP_WSBEiJ_P0038026 Mapk8 protein_coding protein_coding MGP_WSBEiJ_T0038027.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26699202 26704508 - Mapk8 protein_coding retained_intron MGP_WSBEiJ_T0038028.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26706217 26765465 - Mapk8 protein_coding retained_intron MGP_WSBEiJ_T0038029.1 MGP_WSBEiJ_G0020471.1 mouse_genomes_project 14 26721707 26765464 - Mapk8 protein_coding retained_intron MGP_WSBEiJ_T0038736.1 MGP_WSBEiJ_G0020685.1 mouse_genomes_project 14 50036924 50039445 + MGP_WSBEiJ_P0038736 Ltb4r1 protein_coding protein_coding MGP_WSBEiJ_T0038587.1 MGP_WSBEiJ_G0020653.1 mouse_genomes_project 14 49303682 49348735 + MGP_WSBEiJ_P0038587 Thtpa protein_coding protein_coding MGP_WSBEiJ_T0038588.1 MGP_WSBEiJ_G0020653.1 mouse_genomes_project 14 49304749 49349122 + Thtpa protein_coding processed_transcript MGP_WSBEiJ_T0038589.1 MGP_WSBEiJ_G0020653.1 mouse_genomes_project 14 49305285 49350197 + MGP_WSBEiJ_P0038589 Thtpa protein_coding protein_coding MGP_WSBEiJ_T0038594.1 MGP_WSBEiJ_G0020653.1 mouse_genomes_project 14 49345993 49350197 + MGP_WSBEiJ_P0038594 Thtpa protein_coding protein_coding MGP_WSBEiJ_T0038131.1 MGP_WSBEiJ_G0020519.1 mouse_genomes_project 14 38809255 38813454 + Gpr137c protein_coding processed_transcript MGP_WSBEiJ_T0038132.1 MGP_WSBEiJ_G0020519.1 mouse_genomes_project 14 38809529 38872373 + MGP_WSBEiJ_P0038132 Gpr137c protein_coding protein_coding MGP_WSBEiJ_T0038133.1 MGP_WSBEiJ_G0020519.1 mouse_genomes_project 14 38856785 38870397 + Gpr137c protein_coding retained_intron MGP_WSBEiJ_T0039325.1 MGP_WSBEiJ_G0020916.1 mouse_genomes_project 14 74997829 75004374 - MGP_WSBEiJ_P0039325 Gm10845 protein_coding protein_coding MGP_WSBEiJ_T0002600.1 MGP_WSBEiJ_G0002493.1 mouse_genomes_project 14 48050826 48051422 + MGP_WSBEiJ_P0002600 Trav19 TR_V_gene TR_V_gene MGP_WSBEiJ_T0009853.1 MGP_WSBEiJ_G0008010.1 mouse_genomes_project 14 73222039 73222145 - Mir1971 miRNA miRNA MGP_WSBEiJ_T0039049.1 MGP_WSBEiJ_G0020814.1 mouse_genomes_project 14 61855831 61919184 - MGP_WSBEiJ_P0039049 Ppp2r2a protein_coding protein_coding MGP_WSBEiJ_T0038047.1 MGP_WSBEiJ_G0020486.1 mouse_genomes_project 14 27662867 27698734 + MGP_WSBEiJ_P0038047 protein_coding protein_coding MGP_WSBEiJ_T0038048.1 MGP_WSBEiJ_G0020486.1 mouse_genomes_project 14 27674551 27698856 + MGP_WSBEiJ_P0038048 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038049.1 MGP_WSBEiJ_G0020486.1 mouse_genomes_project 14 27679306 27685879 + protein_coding retained_intron MGP_WSBEiJ_T0038050.1 MGP_WSBEiJ_G0020486.1 mouse_genomes_project 14 27683869 27690533 + protein_coding processed_transcript MGP_WSBEiJ_T0038051.1 MGP_WSBEiJ_G0020486.1 mouse_genomes_project 14 27685921 27695205 + MGP_WSBEiJ_P0038051 protein_coding protein_coding MGP_WSBEiJ_T0038052.1 MGP_WSBEiJ_G0020486.1 mouse_genomes_project 14 27687027 27694995 + protein_coding processed_transcript MGP_WSBEiJ_T0002485.1 MGP_WSBEiJ_G0002395.1 mouse_genomes_project 14 48389557 48389614 + MGP_WSBEiJ_P0002485 Traj31 TR_J_gene TR_J_gene MGP_WSBEiJ_T0000875.1 MGP_WSBEiJ_G0000813.1 mouse_genomes_project 14 14740451 14760720 + TEC TEC MGP_WSBEiJ_T0038232.1 MGP_WSBEiJ_G0020544.1 mouse_genomes_project 14 42443058 42450753 - MGP_WSBEiJ_P0038232 Otx2 protein_coding protein_coding MGP_WSBEiJ_T0038233.1 MGP_WSBEiJ_G0020544.1 mouse_genomes_project 14 42443552 42448345 - MGP_WSBEiJ_P0038233 Otx2 protein_coding protein_coding MGP_WSBEiJ_T0038234.1 MGP_WSBEiJ_G0020544.1 mouse_genomes_project 14 42443552 42454251 - MGP_WSBEiJ_P0038234 Otx2 protein_coding protein_coding MGP_WSBEiJ_T0038235.1 MGP_WSBEiJ_G0020544.1 mouse_genomes_project 14 42444297 42447373 - MGP_WSBEiJ_P0038235 Otx2 protein_coding protein_coding MGP_WSBEiJ_T0038236.1 MGP_WSBEiJ_G0020544.1 mouse_genomes_project 14 42444334 42454382 - MGP_WSBEiJ_P0038236 Otx2 protein_coding protein_coding MGP_WSBEiJ_T0038237.1 MGP_WSBEiJ_G0020544.1 mouse_genomes_project 14 42444686 42454246 - MGP_WSBEiJ_P0038237 Otx2 protein_coding protein_coding MGP_WSBEiJ_T0038238.1 MGP_WSBEiJ_G0020544.1 mouse_genomes_project 14 42446782 42454246 - MGP_WSBEiJ_P0038238 Otx2 protein_coding protein_coding MGP_WSBEiJ_T0038239.1 MGP_WSBEiJ_G0020544.1 mouse_genomes_project 14 42446832 42452263 - MGP_WSBEiJ_P0038239 Otx2 protein_coding protein_coding MGP_WSBEiJ_T0038120.1 MGP_WSBEiJ_G0020517.1 mouse_genomes_project 14 38569715 38588502 + MGP_WSBEiJ_P0038120 Ptger2 protein_coding protein_coding MGP_WSBEiJ_T0038735.1 MGP_WSBEiJ_G0020684.1 mouse_genomes_project 14 50032404 50034206 + MGP_WSBEiJ_P0038735 Ltb4r2 protein_coding protein_coding MGP_WSBEiJ_T0038039.1 MGP_WSBEiJ_G0020481.1 mouse_genomes_project 14 27421472 27436058 + MGP_WSBEiJ_P0038039 Anxa8 protein_coding protein_coding MGP_WSBEiJ_T0038040.1 MGP_WSBEiJ_G0020481.1 mouse_genomes_project 14 27421516 27435508 + MGP_WSBEiJ_P0038040 Anxa8 protein_coding protein_coding MGP_WSBEiJ_T0016787.1 MGP_WSBEiJ_G0014687.1 mouse_genomes_project 14 14655864 14659322 + A430057M04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016788.1 MGP_WSBEiJ_G0014687.1 mouse_genomes_project 14 14656734 14665224 + A430057M04Rik processed_transcript processed_transcript MGP_WSBEiJ_T0097853.1 MGP_WSBEiJ_G0036516.1 mouse_genomes_project 14 52259578 52259725 - Gm22738 snRNA snRNA MGP_WSBEiJ_T0037481.1 MGP_WSBEiJ_G0020334.1 mouse_genomes_project 14 10761051 10782449 - Nr1d2 protein_coding retained_intron MGP_WSBEiJ_T0037482.1 MGP_WSBEiJ_G0020334.1 mouse_genomes_project 14 10761380 10782244 - MGP_WSBEiJ_P0037482 Nr1d2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038116.1 MGP_WSBEiJ_G0020513.1 mouse_genomes_project 14 34705380 34712116 + MGP_WSBEiJ_P0038116 Mbl1 protein_coding protein_coding MGP_WSBEiJ_T0037448.1 MGP_WSBEiJ_G0020322.1 mouse_genomes_project 14 6638254 6639277 - MGP_WSBEiJ_P0037448 Olfr720 protein_coding protein_coding MGP_WSBEiJ_T0037449.1 MGP_WSBEiJ_G0020322.1 mouse_genomes_project 14 6638856 6652610 - MGP_WSBEiJ_P0037449 Olfr720 protein_coding protein_coding MGP_WSBEiJ_T0038000.1 MGP_WSBEiJ_G0020467.1 mouse_genomes_project 14 26150009 26232344 + MGP_WSBEiJ_P0038000 Vstm4 protein_coding protein_coding MGP_WSBEiJ_T0039357.1 MGP_WSBEiJ_G0020931.1 mouse_genomes_project 14 95989343 96282171 - MGP_WSBEiJ_P0039357 Klf12 protein_coding protein_coding MGP_WSBEiJ_T0037523.1 MGP_WSBEiJ_G0020348.1 mouse_genomes_project 14 13093536 13113921 + MGP_WSBEiJ_P0037523 Fam149b protein_coding protein_coding MGP_WSBEiJ_T0037524.1 MGP_WSBEiJ_G0020348.1 mouse_genomes_project 14 13093536 13129772 + MGP_WSBEiJ_P0037524 Fam149b protein_coding protein_coding MGP_WSBEiJ_T0037525.1 MGP_WSBEiJ_G0020348.1 mouse_genomes_project 14 13093536 13129772 + MGP_WSBEiJ_P0037525 Fam149b protein_coding protein_coding MGP_WSBEiJ_T0037526.1 MGP_WSBEiJ_G0020348.1 mouse_genomes_project 14 13093596 13129772 + MGP_WSBEiJ_P0037526 Fam149b protein_coding protein_coding MGP_WSBEiJ_T0099127.1 MGP_WSBEiJ_G0037790.1 mouse_genomes_project 14 102833988 102834095 - Gm24634 snoRNA snoRNA MGP_WSBEiJ_T0038518.1 MGP_WSBEiJ_G0020630.1 mouse_genomes_project 14 48794172 48816859 - MGP_WSBEiJ_P0038518 4931414P19Rik protein_coding protein_coding MGP_WSBEiJ_T0009841.1 MGP_WSBEiJ_G0007998.1 mouse_genomes_project 14 57508317 57508427 + Mir6541 miRNA miRNA MGP_WSBEiJ_T0002529.1 MGP_WSBEiJ_G0002437.1 mouse_genomes_project 14 48362567 48362630 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0039054.1 MGP_WSBEiJ_G0020816.1 mouse_genomes_project 14 62557623 62599522 - MGP_WSBEiJ_P0039054 Cdca2 protein_coding protein_coding MGP_WSBEiJ_T0039055.1 MGP_WSBEiJ_G0020816.1 mouse_genomes_project 14 62557647 62599291 - MGP_WSBEiJ_P0039055 Cdca2 protein_coding protein_coding MGP_WSBEiJ_T0039056.1 MGP_WSBEiJ_G0020816.1 mouse_genomes_project 14 62559088 62578010 - MGP_WSBEiJ_P0039056 Cdca2 protein_coding protein_coding MGP_WSBEiJ_T0039057.1 MGP_WSBEiJ_G0020816.1 mouse_genomes_project 14 62561594 62599291 - MGP_WSBEiJ_P0039057 Cdca2 protein_coding protein_coding MGP_WSBEiJ_T0039058.1 MGP_WSBEiJ_G0020816.1 mouse_genomes_project 14 62575432 62579257 - MGP_WSBEiJ_P0039058 Cdca2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039059.1 MGP_WSBEiJ_G0020816.1 mouse_genomes_project 14 62582613 62599056 - Cdca2 protein_coding retained_intron MGP_WSBEiJ_T0039060.1 MGP_WSBEiJ_G0020816.1 mouse_genomes_project 14 62583949 62599362 - MGP_WSBEiJ_P0039060 Cdca2 protein_coding protein_coding MGP_WSBEiJ_T0002480.1 MGP_WSBEiJ_G0002390.1 mouse_genomes_project 14 48382481 48382541 + MGP_WSBEiJ_P0002480 Traj37 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038979.1 MGP_WSBEiJ_G0020790.1 mouse_genomes_project 14 60004311 60054317 + MGP_WSBEiJ_P0038979 Fbxo16 protein_coding protein_coding MGP_WSBEiJ_T0038980.1 MGP_WSBEiJ_G0020790.1 mouse_genomes_project 14 60008347 60056474 + MGP_WSBEiJ_P0038980 Fbxo16 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012684.1 MGP_WSBEiJ_G0010814.1 mouse_genomes_project 14 2247550 2248154 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002472.1 MGP_WSBEiJ_G0002382.1 mouse_genomes_project 14 48373866 48373929 + MGP_WSBEiJ_P0002472 Traj45 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038754.1 MGP_WSBEiJ_G0020696.1 mouse_genomes_project 14 50347550 50350116 - MGP_WSBEiJ_P0038754 Mcpt4 protein_coding protein_coding MGP_WSBEiJ_T0039011.1 MGP_WSBEiJ_G0020805.1 mouse_genomes_project 14 60942523 61074870 - MGP_WSBEiJ_P0039011 Ptk2b protein_coding protein_coding MGP_WSBEiJ_T0039012.1 MGP_WSBEiJ_G0020805.1 mouse_genomes_project 14 60942524 60999880 - MGP_WSBEiJ_P0039012 Ptk2b protein_coding protein_coding MGP_WSBEiJ_T0039013.1 MGP_WSBEiJ_G0020805.1 mouse_genomes_project 14 60942528 60959535 - MGP_WSBEiJ_P0039013 Ptk2b protein_coding protein_coding MGP_WSBEiJ_T0039014.1 MGP_WSBEiJ_G0020805.1 mouse_genomes_project 14 60942528 61074870 - MGP_WSBEiJ_P0039014 Ptk2b protein_coding protein_coding MGP_WSBEiJ_T0039015.1 MGP_WSBEiJ_G0020805.1 mouse_genomes_project 14 60942533 60949931 - Ptk2b protein_coding retained_intron MGP_WSBEiJ_T0039016.1 MGP_WSBEiJ_G0020805.1 mouse_genomes_project 14 60943110 61074800 - MGP_WSBEiJ_P0039016 Ptk2b protein_coding protein_coding MGP_WSBEiJ_T0039017.1 MGP_WSBEiJ_G0020805.1 mouse_genomes_project 14 60945536 60953155 - Ptk2b protein_coding retained_intron MGP_WSBEiJ_T0039018.1 MGP_WSBEiJ_G0020805.1 mouse_genomes_project 14 60961978 61074810 - Ptk2b protein_coding retained_intron MGP_WSBEiJ_T0002564.1 MGP_WSBEiJ_G0002464.1 mouse_genomes_project 14 46883236 46883716 + MGP_WSBEiJ_P0002564 Trav6d-4 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002565.1 MGP_WSBEiJ_G0002464.1 mouse_genomes_project 14 46883267 46883716 + MGP_WSBEiJ_P0002565 Trav6d-4 TR_V_gene TR_V_gene MGP_WSBEiJ_T0038458.1 MGP_WSBEiJ_G0020615.1 mouse_genomes_project 14 46612097 46620645 + MGP_WSBEiJ_P0038458 Olfr1509 protein_coding protein_coding MGP_WSBEiJ_T0038459.1 MGP_WSBEiJ_G0020615.1 mouse_genomes_project 14 46612098 46620034 + MGP_WSBEiJ_P0038459 Olfr1509 protein_coding protein_coding MGP_WSBEiJ_T0038460.1 MGP_WSBEiJ_G0020615.1 mouse_genomes_project 14 46612133 46619868 + MGP_WSBEiJ_P0038460 Olfr1509 protein_coding protein_coding MGP_WSBEiJ_T0038461.1 MGP_WSBEiJ_G0020615.1 mouse_genomes_project 14 46618590 46620127 + MGP_WSBEiJ_P0038461 Olfr1509 protein_coding protein_coding MGP_WSBEiJ_T0038462.1 MGP_WSBEiJ_G0020615.1 mouse_genomes_project 14 46619635 46620645 + MGP_WSBEiJ_P0038462 Olfr1509 protein_coding protein_coding MGP_WSBEiJ_T0038688.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49894141 49904396 - MGP_WSBEiJ_P0038688 Ipo4 protein_coding protein_coding MGP_WSBEiJ_T0038689.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49894374 49904343 - MGP_WSBEiJ_P0038689 Ipo4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038690.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49894456 49895173 - Ipo4 protein_coding retained_intron MGP_WSBEiJ_T0038691.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49894459 49896282 - Ipo4 protein_coding processed_transcript MGP_WSBEiJ_T0038692.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49894462 49895158 - Ipo4 protein_coding processed_transcript MGP_WSBEiJ_T0038693.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49894464 49896109 - Ipo4 protein_coding retained_intron MGP_WSBEiJ_T0038694.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49894480 49904669 - MGP_WSBEiJ_P0038694 Ipo4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038695.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49894636 49906607 - Ipo4 protein_coding processed_transcript MGP_WSBEiJ_T0038696.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49896016 49896643 - Ipo4 protein_coding retained_intron MGP_WSBEiJ_T0038697.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49897501 49899379 - Ipo4 protein_coding retained_intron MGP_WSBEiJ_T0038698.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49901639 49902370 - Ipo4 protein_coding retained_intron MGP_WSBEiJ_T0038699.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49902468 49903922 - Ipo4 protein_coding retained_intron MGP_WSBEiJ_T0038700.1 MGP_WSBEiJ_G0020672.1 mouse_genomes_project 14 49902759 49904281 - Ipo4 protein_coding retained_intron MGP_WSBEiJ_T0037911.1 MGP_WSBEiJ_G0020443.1 mouse_genomes_project 14 24563979 24642432 - MGP_WSBEiJ_P0037911 Sh3bp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037912.1 MGP_WSBEiJ_G0020443.1 mouse_genomes_project 14 24577916 24623224 - MGP_WSBEiJ_P0037912 Sh3bp5 protein_coding protein_coding MGP_WSBEiJ_T0037913.1 MGP_WSBEiJ_G0020443.1 mouse_genomes_project 14 24577916 24642419 - MGP_WSBEiJ_P0037913 Sh3bp5 protein_coding protein_coding MGP_WSBEiJ_T0037914.1 MGP_WSBEiJ_G0020443.1 mouse_genomes_project 14 24581730 24612876 - Sh3bp5 protein_coding processed_transcript MGP_WSBEiJ_T0100572.1 MGP_WSBEiJ_G0039030.1 mouse_genomes_project 14 38281532 38284052 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097840.1 MGP_WSBEiJ_G0036503.1 mouse_genomes_project 14 42437890 42437994 + Gm23469 snRNA snRNA MGP_WSBEiJ_T0003451.1 MGP_WSBEiJ_G0003143.1 mouse_genomes_project 14 13395251 13398290 + 2810402E24Rik antisense antisense MGP_WSBEiJ_T0037754.1 MGP_WSBEiJ_G0020409.1 mouse_genomes_project 14 20706781 21584985 + MGP_WSBEiJ_P0037754 Erc2 protein_coding protein_coding MGP_WSBEiJ_T0037755.1 MGP_WSBEiJ_G0020409.1 mouse_genomes_project 14 20968239 21418683 + MGP_WSBEiJ_P0037755 Erc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038551.1 MGP_WSBEiJ_G0020638.1 mouse_genomes_project 14 48922343 48924152 - MGP_WSBEiJ_P0038551 Cebpe protein_coding protein_coding MGP_WSBEiJ_T0038134.1 MGP_WSBEiJ_G0020520.1 mouse_genomes_project 14 38874234 38915440 - MGP_WSBEiJ_P0038134 Ero1l protein_coding protein_coding MGP_WSBEiJ_T0037420.1 MGP_WSBEiJ_G0020311.1 mouse_genomes_project 14 3586489 3588487 + MGP_WSBEiJ_P0037420 Rpl21-ps4 protein_coding protein_coding MGP_WSBEiJ_T0002499.1 MGP_WSBEiJ_G0002409.1 mouse_genomes_project 14 48404543 48404606 + MGP_WSBEiJ_P0002499 Traj17 TR_J_gene TR_J_gene MGP_WSBEiJ_T0097881.1 MGP_WSBEiJ_G0036544.1 mouse_genomes_project 14 119629455 119629562 - Gm25464 snRNA snRNA MGP_WSBEiJ_T0039484.1 MGP_WSBEiJ_G0020975.1 mouse_genomes_project 14 118181137 118398349 + MGP_WSBEiJ_P0039484 Farp1 protein_coding protein_coding MGP_WSBEiJ_T0039485.1 MGP_WSBEiJ_G0020975.1 mouse_genomes_project 14 118181501 118448053 + MGP_WSBEiJ_P0039485 Farp1 protein_coding protein_coding MGP_WSBEiJ_T0039486.1 MGP_WSBEiJ_G0020975.1 mouse_genomes_project 14 118250803 118401882 + Farp1 protein_coding processed_transcript MGP_WSBEiJ_T0039487.1 MGP_WSBEiJ_G0020975.1 mouse_genomes_project 14 118419219 118432317 + Farp1 protein_coding retained_intron MGP_WSBEiJ_T0016823.1 MGP_WSBEiJ_G0014698.1 mouse_genomes_project 14 73095507 73118253 + Gm19301 processed_transcript processed_transcript MGP_WSBEiJ_T0037961.1 MGP_WSBEiJ_G0020453.1 mouse_genomes_project 14 25387848 25404447 + MGP_WSBEiJ_P0037961 Msmb protein_coding protein_coding MGP_WSBEiJ_T0037962.1 MGP_WSBEiJ_G0020453.1 mouse_genomes_project 14 25393492 25404447 + MGP_WSBEiJ_P0037962 Msmb protein_coding protein_coding MGP_WSBEiJ_T0038595.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49349788 49357750 - MGP_WSBEiJ_P0038595 Ap1g2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038596.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49350060 49350599 - Ap1g2 protein_coding retained_intron MGP_WSBEiJ_T0038597.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49350060 49357483 - MGP_WSBEiJ_P0038597 Ap1g2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038598.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49350060 49357764 - MGP_WSBEiJ_P0038598 Ap1g2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038599.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49350060 49357809 - MGP_WSBEiJ_P0038599 Ap1g2 protein_coding protein_coding MGP_WSBEiJ_T0038600.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49350065 49357363 - MGP_WSBEiJ_P0038600 Ap1g2 protein_coding protein_coding MGP_WSBEiJ_T0038601.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49350264 49357348 - Ap1g2 protein_coding processed_transcript MGP_WSBEiJ_T0038602.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49351642 49351995 - Ap1g2 protein_coding retained_intron MGP_WSBEiJ_T0038603.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49353564 49355725 - Ap1g2 protein_coding retained_intron MGP_WSBEiJ_T0038604.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49353847 49356106 - Ap1g2 protein_coding retained_intron MGP_WSBEiJ_T0038605.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49356920 49357777 - Ap1g2 protein_coding retained_intron MGP_WSBEiJ_T0038606.1 MGP_WSBEiJ_G0020655.1 mouse_genomes_project 14 49357140 49357724 - Ap1g2 protein_coding processed_transcript MGP_WSBEiJ_T0039494.1 MGP_WSBEiJ_G0020980.1 mouse_genomes_project 14 119127871 119132199 - MGP_WSBEiJ_P0039494 Gpr18 protein_coding protein_coding MGP_WSBEiJ_T0006605.1 MGP_WSBEiJ_G0005460.1 mouse_genomes_project 14 52437472 52441844 + 3110083C13Rik lincRNA lincRNA MGP_WSBEiJ_T0038623.1 MGP_WSBEiJ_G0020661.1 mouse_genomes_project 14 49776787 49781924 - MGP_WSBEiJ_P0038623 Nrl protein_coding protein_coding MGP_WSBEiJ_T0038624.1 MGP_WSBEiJ_G0020661.1 mouse_genomes_project 14 49777335 49782714 - MGP_WSBEiJ_P0038624 Nrl protein_coding protein_coding MGP_WSBEiJ_T0038625.1 MGP_WSBEiJ_G0020661.1 mouse_genomes_project 14 49777335 49782698 - MGP_WSBEiJ_P0038625 Nrl protein_coding protein_coding MGP_WSBEiJ_T0039358.1 MGP_WSBEiJ_G0020932.1 mouse_genomes_project 14 97346058 97348438 - MGP_WSBEiJ_P0039358 Prr30 protein_coding protein_coding MGP_WSBEiJ_T0039359.1 MGP_WSBEiJ_G0020932.1 mouse_genomes_project 14 97346066 97348699 - MGP_WSBEiJ_P0039359 Prr30 protein_coding protein_coding MGP_WSBEiJ_T0038834.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53672495 53694622 + MGP_WSBEiJ_P0038834 Rcbtb1 protein_coding protein_coding MGP_WSBEiJ_T0038835.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53672514 53709077 + MGP_WSBEiJ_P0038835 Rcbtb1 protein_coding protein_coding MGP_WSBEiJ_T0038836.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53672520 53706935 + MGP_WSBEiJ_P0038836 Rcbtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038837.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53672528 53709077 + MGP_WSBEiJ_P0038837 Rcbtb1 protein_coding protein_coding MGP_WSBEiJ_T0038838.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53672762 53681254 + MGP_WSBEiJ_P0038838 Rcbtb1 protein_coding protein_coding MGP_WSBEiJ_T0038839.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53672769 53693934 + Rcbtb1 protein_coding processed_transcript MGP_WSBEiJ_T0038840.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53672789 53681350 + MGP_WSBEiJ_P0038840 Rcbtb1 protein_coding protein_coding MGP_WSBEiJ_T0038841.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53676897 53701367 + MGP_WSBEiJ_P0038841 Rcbtb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038842.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53687784 53696131 + Rcbtb1 protein_coding processed_transcript MGP_WSBEiJ_T0038843.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53689016 53709071 + MGP_WSBEiJ_P0038843 Rcbtb1 protein_coding protein_coding MGP_WSBEiJ_T0038844.1 MGP_WSBEiJ_G0020732.1 mouse_genomes_project 14 53693995 53696092 + Rcbtb1 protein_coding retained_intron MGP_WSBEiJ_T0000889.1 MGP_WSBEiJ_G0000827.1 mouse_genomes_project 14 61764406 61765778 + TEC TEC MGP_WSBEiJ_T0002606.1 MGP_WSBEiJ_G0002497.1 mouse_genomes_project 14 48154235 48154885 + MGP_WSBEiJ_P0002606 Trdv2-2 TR_V_gene TR_V_gene MGP_WSBEiJ_T0038628.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823365 49833437 + MGP_WSBEiJ_P0038628 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038629.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823377 49824802 + MGP_WSBEiJ_P0038629 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038630.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823380 49824116 + Dcaf11 protein_coding processed_transcript MGP_WSBEiJ_T0038631.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823384 49826294 + MGP_WSBEiJ_P0038631 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038632.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823421 49833436 + MGP_WSBEiJ_P0038632 Dcaf11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038633.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823480 49832905 + Dcaf11 protein_coding retained_intron MGP_WSBEiJ_T0038634.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823841 49824460 + Dcaf11 protein_coding processed_transcript MGP_WSBEiJ_T0038635.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823871 49833303 + MGP_WSBEiJ_P0038635 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038636.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823877 49824804 + MGP_WSBEiJ_P0038636 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038637.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823892 49827764 + MGP_WSBEiJ_P0038637 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038638.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49823893 49833433 + MGP_WSBEiJ_P0038638 Dcaf11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038639.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49824289 49833434 + MGP_WSBEiJ_P0038639 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038640.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49824331 49827141 + MGP_WSBEiJ_P0038640 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038641.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49824344 49833436 + Dcaf11 protein_coding retained_intron MGP_WSBEiJ_T0038642.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49824427 49833303 + MGP_WSBEiJ_P0038642 Dcaf11 protein_coding protein_coding MGP_WSBEiJ_T0038643.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49824427 49833303 + MGP_WSBEiJ_P0038643 Dcaf11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038644.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49827751 49828204 + Dcaf11 protein_coding retained_intron MGP_WSBEiJ_T0038645.1 MGP_WSBEiJ_G0020664.1 mouse_genomes_project 14 49829222 49832759 + Dcaf11 protein_coding processed_transcript MGP_WSBEiJ_T0038383.1 MGP_WSBEiJ_G0020600.1 mouse_genomes_project 14 46147520 46162845 - MGP_WSBEiJ_P0038383 Zfp219 protein_coding protein_coding MGP_WSBEiJ_T0038384.1 MGP_WSBEiJ_G0020600.1 mouse_genomes_project 14 46147529 46160228 - MGP_WSBEiJ_P0038384 Zfp219 protein_coding protein_coding MGP_WSBEiJ_T0038227.1 MGP_WSBEiJ_G0020543.1 mouse_genomes_project 14 42214277 42283215 + MGP_WSBEiJ_P0038227 Tmem260 protein_coding protein_coding MGP_WSBEiJ_T0038228.1 MGP_WSBEiJ_G0020543.1 mouse_genomes_project 14 42214501 42270408 + Tmem260 protein_coding retained_intron MGP_WSBEiJ_T0038229.1 MGP_WSBEiJ_G0020543.1 mouse_genomes_project 14 42214531 42285560 + MGP_WSBEiJ_P0038229 Tmem260 protein_coding protein_coding MGP_WSBEiJ_T0038230.1 MGP_WSBEiJ_G0020543.1 mouse_genomes_project 14 42214542 42282560 + MGP_WSBEiJ_P0038230 Tmem260 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038231.1 MGP_WSBEiJ_G0020543.1 mouse_genomes_project 14 42214547 42278804 + Tmem260 protein_coding retained_intron MGP_WSBEiJ_T0038575.1 MGP_WSBEiJ_G0020647.1 mouse_genomes_project 14 49170359 49173501 + MGP_WSBEiJ_P0038575 Il25 protein_coding protein_coding MGP_WSBEiJ_T0037519.1 MGP_WSBEiJ_G0020344.1 mouse_genomes_project 14 12884093 12926727 - MGP_WSBEiJ_P0037519 Kcnk5 protein_coding protein_coding MGP_WSBEiJ_T0037450.1 MGP_WSBEiJ_G0020323.1 mouse_genomes_project 14 6790469 6796626 + MGP_WSBEiJ_P0037450 Olfr31 protein_coding protein_coding MGP_WSBEiJ_T0037451.1 MGP_WSBEiJ_G0020323.1 mouse_genomes_project 14 6795672 6796626 + MGP_WSBEiJ_P0037451 Olfr31 protein_coding protein_coding MGP_WSBEiJ_T0037768.1 MGP_WSBEiJ_G0020415.1 mouse_genomes_project 14 23136766 23149479 - MGP_WSBEiJ_P0037768 Il17rb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037769.1 MGP_WSBEiJ_G0020415.1 mouse_genomes_project 14 23136793 23149562 - MGP_WSBEiJ_P0037769 Il17rb protein_coding protein_coding MGP_WSBEiJ_T0037770.1 MGP_WSBEiJ_G0020415.1 mouse_genomes_project 14 23136793 23149562 - MGP_WSBEiJ_P0037770 Il17rb protein_coding protein_coding MGP_WSBEiJ_T0037771.1 MGP_WSBEiJ_G0020415.1 mouse_genomes_project 14 23136824 23149475 - MGP_WSBEiJ_P0037771 Il17rb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038177.1 MGP_WSBEiJ_G0020533.1 mouse_genomes_project 14 40837617 40875339 - MGP_WSBEiJ_P0038177 Gch1 protein_coding protein_coding MGP_WSBEiJ_T0039253.1 MGP_WSBEiJ_G0020887.1 mouse_genomes_project 14 70782824 70787045 + MGP_WSBEiJ_P0039253 Tpt1 protein_coding protein_coding MGP_WSBEiJ_T0039254.1 MGP_WSBEiJ_G0020887.1 mouse_genomes_project 14 70783033 70787155 + MGP_WSBEiJ_P0039254 Tpt1 protein_coding protein_coding MGP_WSBEiJ_T0039255.1 MGP_WSBEiJ_G0020887.1 mouse_genomes_project 14 70783062 70784434 + Tpt1 protein_coding retained_intron MGP_WSBEiJ_T0039256.1 MGP_WSBEiJ_G0020887.1 mouse_genomes_project 14 70783063 70783701 + Tpt1 protein_coding retained_intron MGP_WSBEiJ_T0039257.1 MGP_WSBEiJ_G0020887.1 mouse_genomes_project 14 70783086 70784630 + Tpt1 protein_coding retained_intron MGP_WSBEiJ_T0039258.1 MGP_WSBEiJ_G0020887.1 mouse_genomes_project 14 70783631 70786927 + Tpt1 protein_coding processed_transcript MGP_WSBEiJ_T0039496.1 MGP_WSBEiJ_G0020982.1 mouse_genomes_project 14 119250622 119254345 + MGP_WSBEiJ_P0039496 Timm8a2 protein_coding protein_coding MGP_WSBEiJ_T0012700.1 MGP_WSBEiJ_G0010830.1 mouse_genomes_project 14 19602327 19603125 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006623.1 MGP_WSBEiJ_G0005473.1 mouse_genomes_project 14 70038900 70039543 - Gm15628 lincRNA lincRNA MGP_WSBEiJ_T0039069.1 MGP_WSBEiJ_G0020821.1 mouse_genomes_project 14 62978022 62983723 + MGP_WSBEiJ_P0039069 Nefl protein_coding protein_coding MGP_WSBEiJ_T0003475.1 MGP_WSBEiJ_G0003163.1 mouse_genomes_project 14 48335339 48346669 - Gm43434 antisense antisense MGP_WSBEiJ_T0038137.1 MGP_WSBEiJ_G0020523.1 mouse_genomes_project 14 38964928 38978077 + MGP_WSBEiJ_P0038137 protein_coding protein_coding MGP_WSBEiJ_T0037555.1 MGP_WSBEiJ_G0020357.1 mouse_genomes_project 14 13414227 13423571 - MGP_WSBEiJ_P0037555 Synpo2l protein_coding protein_coding MGP_WSBEiJ_T0037556.1 MGP_WSBEiJ_G0020357.1 mouse_genomes_project 14 13414229 13419859 - MGP_WSBEiJ_P0037556 Synpo2l protein_coding protein_coding MGP_WSBEiJ_T0037557.1 MGP_WSBEiJ_G0020357.1 mouse_genomes_project 14 13414699 13423619 - MGP_WSBEiJ_P0037557 Synpo2l protein_coding protein_coding MGP_WSBEiJ_T0003465.1 MGP_WSBEiJ_G0003154.1 mouse_genomes_project 14 27860240 27861207 + Gm17110 antisense antisense MGP_WSBEiJ_T0038184.1 MGP_WSBEiJ_G0020536.1 mouse_genomes_project 14 40986249 41014427 + MGP_WSBEiJ_P0038184 Mapk1ip1l protein_coding protein_coding MGP_WSBEiJ_T0038292.1 MGP_WSBEiJ_G0020574.1 mouse_genomes_project 14 44739533 44752675 + MGP_WSBEiJ_P0038292 Parp2 protein_coding protein_coding MGP_WSBEiJ_T0038822.1 MGP_WSBEiJ_G0020727.1 mouse_genomes_project 14 52261217 52322318 - MGP_WSBEiJ_P0038822 Zdhhc20 protein_coding protein_coding MGP_WSBEiJ_T0038823.1 MGP_WSBEiJ_G0020727.1 mouse_genomes_project 14 52264681 52322236 - MGP_WSBEiJ_P0038823 Zdhhc20 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037702.1 MGP_WSBEiJ_G0020395.1 mouse_genomes_project 14 18895092 18902562 + MGP_WSBEiJ_P0037702 Duxbl3 protein_coding protein_coding MGP_WSBEiJ_T0037706.1 MGP_WSBEiJ_G0020395.1 mouse_genomes_project 14 18898773 18905952 + MGP_WSBEiJ_P0037706 Duxbl3 protein_coding protein_coding MGP_WSBEiJ_T0038357.1 MGP_WSBEiJ_G0020598.1 mouse_genomes_project 14 46053470 46054084 - MGP_WSBEiJ_P0038357 Rnase13 protein_coding protein_coding MGP_WSBEiJ_T0099123.1 MGP_WSBEiJ_G0037786.1 mouse_genomes_project 14 97444599 97444735 + Gm26173 snoRNA snoRNA MGP_WSBEiJ_T0038153.1 MGP_WSBEiJ_G0020526.1 mouse_genomes_project 14 40018562 40022565 + Gm15217 protein_coding processed_transcript MGP_WSBEiJ_T0038154.1 MGP_WSBEiJ_G0020526.1 mouse_genomes_project 14 40018615 40022755 + MGP_WSBEiJ_P0038154 Gm15217 protein_coding protein_coding MGP_WSBEiJ_T0038155.1 MGP_WSBEiJ_G0020526.1 mouse_genomes_project 14 40020270 40022515 + Gm15217 protein_coding processed_transcript MGP_WSBEiJ_T0038965.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59545111 59685523 - MGP_WSBEiJ_P0038965 Hmbox1 protein_coding protein_coding MGP_WSBEiJ_T0038966.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59548138 59555802 - Hmbox1 protein_coding processed_transcript MGP_WSBEiJ_T0038967.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59555723 59685520 - MGP_WSBEiJ_P0038967 Hmbox1 protein_coding protein_coding MGP_WSBEiJ_T0038968.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59555723 59685544 - MGP_WSBEiJ_P0038968 Hmbox1 protein_coding protein_coding MGP_WSBEiJ_T0038969.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59556319 59685305 - MGP_WSBEiJ_P0038969 Hmbox1 protein_coding protein_coding MGP_WSBEiJ_T0038970.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59556674 59640166 - MGP_WSBEiJ_P0038970 Hmbox1 protein_coding protein_coding MGP_WSBEiJ_T0038971.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59558565 59685529 - MGP_WSBEiJ_P0038971 Hmbox1 protein_coding protein_coding MGP_WSBEiJ_T0038972.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59558812 59685520 - MGP_WSBEiJ_P0038972 Hmbox1 protein_coding protein_coding MGP_WSBEiJ_T0038973.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59558845 59685520 - MGP_WSBEiJ_P0038973 Hmbox1 protein_coding protein_coding MGP_WSBEiJ_T0038974.1 MGP_WSBEiJ_G0020786.1 mouse_genomes_project 14 59620652 59685520 - Hmbox1 protein_coding retained_intron MGP_WSBEiJ_T0097285.1 MGP_WSBEiJ_G0035962.1 mouse_genomes_project 14 17135301 17140498 - Gm17105 sense_intronic sense_intronic MGP_WSBEiJ_T0000883.1 MGP_WSBEiJ_G0000821.1 mouse_genomes_project 14 49333974 49336151 - TEC TEC MGP_WSBEiJ_T0003458.1 MGP_WSBEiJ_G0003147.1 mouse_genomes_project 14 18352979 18358366 - Zmiz1os1 antisense antisense MGP_WSBEiJ_T0006602.1 MGP_WSBEiJ_G0005458.1 mouse_genomes_project 14 51055861 51058945 - Gm16973 lincRNA lincRNA MGP_WSBEiJ_T0006603.1 MGP_WSBEiJ_G0005458.1 mouse_genomes_project 14 51056930 51060838 - Gm16973 lincRNA lincRNA MGP_WSBEiJ_T0016834.1 MGP_WSBEiJ_G0014704.1 mouse_genomes_project 14 115278058 115280586 + Gm4675 processed_transcript processed_transcript MGP_WSBEiJ_T0016835.1 MGP_WSBEiJ_G0014704.1 mouse_genomes_project 14 115278706 115303701 + Gm4675 processed_transcript processed_transcript MGP_WSBEiJ_T0016836.1 MGP_WSBEiJ_G0014704.1 mouse_genomes_project 14 115296222 115296765 + Gm4675 processed_transcript processed_transcript MGP_WSBEiJ_T0038749.1 MGP_WSBEiJ_G0020692.1 mouse_genomes_project 14 50167106 50170053 - MGP_WSBEiJ_P0038749 Sdr39u1 protein_coding protein_coding MGP_WSBEiJ_T0038750.1 MGP_WSBEiJ_G0020692.1 mouse_genomes_project 14 50167423 50170026 - MGP_WSBEiJ_P0038750 Sdr39u1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037658.1 MGP_WSBEiJ_G0020379.1 mouse_genomes_project 14 17369045 17410352 - MGP_WSBEiJ_P0037658 Polr3a protein_coding protein_coding MGP_WSBEiJ_T0038975.1 MGP_WSBEiJ_G0020787.1 mouse_genomes_project 14 59685717 59776153 + MGP_WSBEiJ_P0038975 Ints9 protein_coding protein_coding MGP_WSBEiJ_T0002455.1 MGP_WSBEiJ_G0002369.1 mouse_genomes_project 14 48330176 48330227 + MGP_WSBEiJ_P0002455 Trdj1 TR_J_gene TR_J_gene MGP_WSBEiJ_T0097286.1 MGP_WSBEiJ_G0035963.1 mouse_genomes_project 14 40636974 40642427 + Gm15562 sense_intronic sense_intronic MGP_WSBEiJ_T0002660.1 MGP_WSBEiJ_G0002544.1 mouse_genomes_project 14 47961213 47961380 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0099080.1 MGP_WSBEiJ_G0037743.1 mouse_genomes_project 14 19534759 19534890 + Gm24031 snoRNA snoRNA MGP_WSBEiJ_T0097867.1 MGP_WSBEiJ_G0036530.1 mouse_genomes_project 14 95431399 95431521 - Gm22984 snRNA snRNA MGP_WSBEiJ_T0039009.1 MGP_WSBEiJ_G0020804.1 mouse_genomes_project 14 60924299 60940434 + MGP_WSBEiJ_P0039009 Chrna2 protein_coding protein_coding MGP_WSBEiJ_T0039010.1 MGP_WSBEiJ_G0020804.1 mouse_genomes_project 14 60930192 60942215 + MGP_WSBEiJ_P0039010 Chrna2 protein_coding protein_coding MGP_WSBEiJ_T0039008.1 MGP_WSBEiJ_G0020803.1 mouse_genomes_project 14 60871763 60914094 - MGP_WSBEiJ_P0039008 Ephx2 protein_coding protein_coding MGP_WSBEiJ_T0002500.1 MGP_WSBEiJ_G0002410.1 mouse_genomes_project 14 48405910 48405971 + MGP_WSBEiJ_P0002500 Traj16 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002533.1 MGP_WSBEiJ_G0002441.1 mouse_genomes_project 14 48407888 48407922 + TR_J_pseudogene TR_J_pseudogene MGP_WSBEiJ_T0037563.1 MGP_WSBEiJ_G0020362.1 mouse_genomes_project 14 13479933 13490776 - MGP_WSBEiJ_P0037563 Ndst2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038919.1 MGP_WSBEiJ_G0020766.1 mouse_genomes_project 14 57694303 57698829 - MGP_WSBEiJ_P0038919 Defb30 protein_coding protein_coding MGP_WSBEiJ_T0038920.1 MGP_WSBEiJ_G0020766.1 mouse_genomes_project 14 57695468 57710746 - MGP_WSBEiJ_P0038920 Defb30 protein_coding protein_coding MGP_WSBEiJ_T0038921.1 MGP_WSBEiJ_G0020766.1 mouse_genomes_project 14 57696793 57710751 - MGP_WSBEiJ_P0038921 Defb30 protein_coding protein_coding MGP_WSBEiJ_T0038922.1 MGP_WSBEiJ_G0020766.1 mouse_genomes_project 14 57696879 57698842 - MGP_WSBEiJ_P0038922 Defb30 protein_coding protein_coding MGP_WSBEiJ_T0002504.1 MGP_WSBEiJ_G0002414.1 mouse_genomes_project 14 48409911 48409970 + MGP_WSBEiJ_P0002504 Traj11 TR_J_gene TR_J_gene MGP_WSBEiJ_T0002573.1 MGP_WSBEiJ_G0002472.1 mouse_genomes_project 14 46937552 46938115 + MGP_WSBEiJ_P0002573 TR_V_gene TR_V_gene MGP_WSBEiJ_T0038762.1 MGP_WSBEiJ_G0020704.1 mouse_genomes_project 14 50566406 50569785 - MGP_WSBEiJ_P0038762 Gzmc protein_coding protein_coding MGP_WSBEiJ_T0038607.1 MGP_WSBEiJ_G0020656.1 mouse_genomes_project 14 49358045 49368178 - MGP_WSBEiJ_P0038607 Jph4 protein_coding protein_coding MGP_WSBEiJ_T0038608.1 MGP_WSBEiJ_G0020656.1 mouse_genomes_project 14 49358491 49366800 - MGP_WSBEiJ_P0038608 Jph4 protein_coding protein_coding MGP_WSBEiJ_T0038609.1 MGP_WSBEiJ_G0020656.1 mouse_genomes_project 14 49360863 49361779 - Jph4 protein_coding retained_intron MGP_WSBEiJ_T0038610.1 MGP_WSBEiJ_G0020656.1 mouse_genomes_project 14 49362737 49367823 - Jph4 protein_coding retained_intron MGP_WSBEiJ_T0037686.1 MGP_WSBEiJ_G0020389.1 mouse_genomes_project 14 18836667 18840098 - MGP_WSBEiJ_P0037686 Tmem254c protein_coding protein_coding MGP_WSBEiJ_T0037687.1 MGP_WSBEiJ_G0020389.1 mouse_genomes_project 14 18836671 18839704 - MGP_WSBEiJ_P0037687 Tmem254c protein_coding protein_coding MGP_WSBEiJ_T0037395.1 MGP_WSBEiJ_G0020305.1 mouse_genomes_project 14 530652 540065 + MGP_WSBEiJ_P0037395 Kctd6 protein_coding protein_coding MGP_WSBEiJ_T0037396.1 MGP_WSBEiJ_G0020305.1 mouse_genomes_project 14 531006 540059 + MGP_WSBEiJ_P0037396 Kctd6 protein_coding protein_coding MGP_WSBEiJ_T0038264.1 MGP_WSBEiJ_G0020552.1 mouse_genomes_project 14 43763834 43812206 - MGP_WSBEiJ_P0038264 Olfr724 protein_coding protein_coding MGP_WSBEiJ_T0038265.1 MGP_WSBEiJ_G0020552.1 mouse_genomes_project 14 43763834 43816616 - MGP_WSBEiJ_P0038265 Olfr724 protein_coding protein_coding MGP_WSBEiJ_T0097855.1 MGP_WSBEiJ_G0036518.1 mouse_genomes_project 14 57768911 57768998 + Gm23629 snRNA snRNA MGP_WSBEiJ_T0038161.1 MGP_WSBEiJ_G0020529.1 mouse_genomes_project 14 40430180 40443753 - MGP_WSBEiJ_P0038161 Cnih1 protein_coding protein_coding MGP_WSBEiJ_T0038162.1 MGP_WSBEiJ_G0020529.1 mouse_genomes_project 14 40430180 40443753 - MGP_WSBEiJ_P0038162 Cnih1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0096956.1 MGP_WSBEiJ_G0035637.1 mouse_genomes_project 14 30303965 30304081 - n-R5s46 rRNA rRNA MGP_WSBEiJ_T0012757.1 MGP_WSBEiJ_G0010887.1 mouse_genomes_project 14 121181003 121181544 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006613.1 MGP_WSBEiJ_G0005467.1 mouse_genomes_project 14 57476025 57477324 - Gm26536 lincRNA lincRNA MGP_WSBEiJ_T0038091.1 MGP_WSBEiJ_G0020502.1 mouse_genomes_project 14 30539863 30560228 - MGP_WSBEiJ_P0038091 Cdhr1 protein_coding protein_coding MGP_WSBEiJ_T0099105.1 MGP_WSBEiJ_G0037768.1 mouse_genomes_project 14 63067472 63067594 - Gm22319 snoRNA snoRNA MGP_WSBEiJ_T0039432.1 MGP_WSBEiJ_G0020950.1 mouse_genomes_project 14 102218635 102223497 - MGP_WSBEiJ_P0039432 Spry2 protein_coding protein_coding MGP_WSBEiJ_T0002607.1 MGP_WSBEiJ_G0002498.1 mouse_genomes_project 14 48173265 48173790 + MGP_WSBEiJ_P0002607 Trav23 TR_V_gene TR_V_gene MGP_WSBEiJ_T0006625.1 MGP_WSBEiJ_G0005475.1 mouse_genomes_project 14 72485307 72514185 - Gm6994 lincRNA lincRNA MGP_WSBEiJ_T0006626.1 MGP_WSBEiJ_G0005475.1 mouse_genomes_project 14 72485931 72508770 - Gm6994 lincRNA lincRNA MGP_WSBEiJ_T0038296.1 MGP_WSBEiJ_G0020578.1 mouse_genomes_project 14 44840231 44860647 - MGP_WSBEiJ_P0038296 Osgep protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038297.1 MGP_WSBEiJ_G0020578.1 mouse_genomes_project 14 44847284 44860706 - MGP_WSBEiJ_P0038297 Osgep protein_coding protein_coding MGP_WSBEiJ_T0038298.1 MGP_WSBEiJ_G0020578.1 mouse_genomes_project 14 44849255 44860643 - MGP_WSBEiJ_P0038298 Osgep protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038299.1 MGP_WSBEiJ_G0020578.1 mouse_genomes_project 14 44849259 44860685 - MGP_WSBEiJ_P0038299 Osgep protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038300.1 MGP_WSBEiJ_G0020578.1 mouse_genomes_project 14 44849259 44860501 - MGP_WSBEiJ_P0038300 Osgep protein_coding protein_coding MGP_WSBEiJ_T0038301.1 MGP_WSBEiJ_G0020578.1 mouse_genomes_project 14 44849361 44850943 - Osgep protein_coding retained_intron MGP_WSBEiJ_T0038302.1 MGP_WSBEiJ_G0020578.1 mouse_genomes_project 14 44850264 44860439 - MGP_WSBEiJ_P0038302 Osgep protein_coding protein_coding MGP_WSBEiJ_T0038303.1 MGP_WSBEiJ_G0020578.1 mouse_genomes_project 14 44850664 44860656 - Osgep protein_coding retained_intron MGP_WSBEiJ_T0038981.1 MGP_WSBEiJ_G0020791.1 mouse_genomes_project 14 60099958 60141864 + MGP_WSBEiJ_P0038981 Zfp395 protein_coding protein_coding MGP_WSBEiJ_T0012702.1 MGP_WSBEiJ_G0010832.1 mouse_genomes_project 14 23976647 23977423 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0038291.1 MGP_WSBEiJ_G0020573.1 mouse_genomes_project 14 44715699 44722110 - MGP_WSBEiJ_P0038291 Ccnb1ip1 protein_coding protein_coding MGP_WSBEiJ_T0100573.1 MGP_WSBEiJ_G0039031.1 mouse_genomes_project 14 44266448 44266731 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006610.1 MGP_WSBEiJ_G0005465.1 mouse_genomes_project 14 57095182 57098568 - lincRNA lincRNA MGP_WSBEiJ_T0006611.1 MGP_WSBEiJ_G0005465.1 mouse_genomes_project 14 57096603 57112574 - lincRNA lincRNA MGP_WSBEiJ_T0002593.1 MGP_WSBEiJ_G0002489.1 mouse_genomes_project 14 47706581 47707112 + MGP_WSBEiJ_P0002593 TR_V_gene TR_V_gene MGP_WSBEiJ_T0038252.1 MGP_WSBEiJ_G0020548.1 mouse_genomes_project 14 43021141 43052788 - MGP_WSBEiJ_P0038252 1700011H14Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0038253.1 MGP_WSBEiJ_G0020548.1 mouse_genomes_project 14 43033554 43052959 - MGP_WSBEiJ_P0038253 1700011H14Rik protein_coding protein_coding MGP_WSBEiJ_T0038254.1 MGP_WSBEiJ_G0020548.1 mouse_genomes_project 14 43033788 43052928 - MGP_WSBEiJ_P0038254 1700011H14Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038255.1 MGP_WSBEiJ_G0020548.1 mouse_genomes_project 14 43040027 43052928 - MGP_WSBEiJ_P0038255 1700011H14Rik protein_coding protein_coding MGP_WSBEiJ_T0037661.1 MGP_WSBEiJ_G0020381.1 mouse_genomes_project 14 18356422 18437015 + Zmiz1 protein_coding retained_intron MGP_WSBEiJ_T0037662.1 MGP_WSBEiJ_G0020381.1 mouse_genomes_project 14 18356461 18568266 + MGP_WSBEiJ_P0037662 Zmiz1 protein_coding protein_coding MGP_WSBEiJ_T0037663.1 MGP_WSBEiJ_G0020381.1 mouse_genomes_project 14 18356504 18566241 + MGP_WSBEiJ_P0037663 Zmiz1 protein_coding protein_coding MGP_WSBEiJ_T0037664.1 MGP_WSBEiJ_G0020381.1 mouse_genomes_project 14 18356529 18551115 + Zmiz1 protein_coding retained_intron MGP_WSBEiJ_T0037665.1 MGP_WSBEiJ_G0020381.1 mouse_genomes_project 14 18356792 18472198 + Zmiz1 protein_coding processed_transcript MGP_WSBEiJ_T0037666.1 MGP_WSBEiJ_G0020381.1 mouse_genomes_project 14 18507617 18545256 + Zmiz1 protein_coding processed_transcript MGP_WSBEiJ_T0037667.1 MGP_WSBEiJ_G0020381.1 mouse_genomes_project 14 18508098 18547276 + MGP_WSBEiJ_P0037667 Zmiz1 protein_coding protein_coding MGP_WSBEiJ_T0037668.1 MGP_WSBEiJ_G0020381.1 mouse_genomes_project 14 18558352 18559928 + Zmiz1 protein_coding retained_intron MGP_WSBEiJ_T0038481.1 MGP_WSBEiJ_G0020620.1 mouse_genomes_project 14 48489482 48490513 - MGP_WSBEiJ_P0038481 Olfr49 protein_coding protein_coding MGP_WSBEiJ_T0037915.1 MGP_WSBEiJ_G0020444.1 mouse_genomes_project 14 24688544 24705273 - MGP_WSBEiJ_P0037915 Mettl6 protein_coding protein_coding MGP_WSBEiJ_T0006574.1 MGP_WSBEiJ_G0005437.1 mouse_genomes_project 14 21614646 21617967 - Gm2670 lincRNA lincRNA MGP_WSBEiJ_T0038046.1 MGP_WSBEiJ_G0020485.1 mouse_genomes_project 14 27579391 27625645 - MGP_WSBEiJ_P0038046 Fam35a protein_coding unknown_likely_coding MGP_WSBEiJ_T0037510.1 MGP_WSBEiJ_G0020340.1 mouse_genomes_project 14 12465310 12529643 + MGP_WSBEiJ_P0037510 Nid2 protein_coding protein_coding MGP_WSBEiJ_T0009860.1 MGP_WSBEiJ_G0008017.1 mouse_genomes_project 14 104817501 104817662 + Gm24818 miRNA miRNA MGP_WSBEiJ_T0038764.1 MGP_WSBEiJ_G0020706.1 mouse_genomes_project 14 50699777 50723282 + MGP_WSBEiJ_P0038764 Atp12a protein_coding protein_coding MGP_WSBEiJ_T0038751.1 MGP_WSBEiJ_G0020693.1 mouse_genomes_project 14 50214578 50217667 - MGP_WSBEiJ_P0038751 Cma1 protein_coding protein_coding MGP_WSBEiJ_T0037814.1 MGP_WSBEiJ_G0020425.1 mouse_genomes_project 14 24063648 24082612 + MGP_WSBEiJ_P0037814 Itih4 protein_coding protein_coding MGP_WSBEiJ_T0037815.1 MGP_WSBEiJ_G0020425.1 mouse_genomes_project 14 24063674 24082475 + MGP_WSBEiJ_P0037815 Itih4 protein_coding protein_coding MGP_WSBEiJ_T0037816.1 MGP_WSBEiJ_G0020425.1 mouse_genomes_project 14 24063674 24082579 + MGP_WSBEiJ_P0037816 Itih4 protein_coding protein_coding MGP_WSBEiJ_T0037817.1 MGP_WSBEiJ_G0020425.1 mouse_genomes_project 14 24063693 24082477 + MGP_WSBEiJ_P0037817 Itih4 protein_coding protein_coding MGP_WSBEiJ_T0037818.1 MGP_WSBEiJ_G0020425.1 mouse_genomes_project 14 24079861 24082480 + Itih4 protein_coding retained_intron MGP_WSBEiJ_T0038090.1 MGP_WSBEiJ_G0020501.1 mouse_genomes_project 14 30529933 30535768 + MGP_WSBEiJ_P0038090 Lrit2 protein_coding protein_coding MGP_WSBEiJ_T0039328.1 MGP_WSBEiJ_G0020918.1 mouse_genomes_project 14 79818243 79918043 + MGP_WSBEiJ_P0039328 Pcdh17 protein_coding protein_coding MGP_WSBEiJ_T0039261.1 MGP_WSBEiJ_G0020890.1 mouse_genomes_project 14 71041003 71066539 - MGP_WSBEiJ_P0039261 Gpalpp1 protein_coding protein_coding MGP_WSBEiJ_T0037541.1 MGP_WSBEiJ_G0020354.1 mouse_genomes_project 14 13250073 13299453 - MGP_WSBEiJ_P0037541 Ppp3cb protein_coding protein_coding MGP_WSBEiJ_T0037542.1 MGP_WSBEiJ_G0020354.1 mouse_genomes_project 14 13250577 13299427 - MGP_WSBEiJ_P0037542 Ppp3cb protein_coding protein_coding MGP_WSBEiJ_T0037543.1 MGP_WSBEiJ_G0020354.1 mouse_genomes_project 14 13250739 13299392 - MGP_WSBEiJ_P0037543 Ppp3cb protein_coding protein_coding MGP_WSBEiJ_T0037544.1 MGP_WSBEiJ_G0020354.1 mouse_genomes_project 14 13252261 13254480 - Ppp3cb protein_coding retained_intron MGP_WSBEiJ_T0037545.1 MGP_WSBEiJ_G0020354.1 mouse_genomes_project 14 13259366 13299320 - MGP_WSBEiJ_P0037545 Ppp3cb protein_coding protein_coding MGP_WSBEiJ_T0037546.1 MGP_WSBEiJ_G0020354.1 mouse_genomes_project 14 13261144 13267528 - Ppp3cb protein_coding retained_intron MGP_WSBEiJ_T0037547.1 MGP_WSBEiJ_G0020354.1 mouse_genomes_project 14 13266959 13272233 - Ppp3cb protein_coding retained_intron MGP_WSBEiJ_T0037548.1 MGP_WSBEiJ_G0020354.1 mouse_genomes_project 14 13272119 13275550 - Ppp3cb protein_coding retained_intron MGP_WSBEiJ_T0039309.1 MGP_WSBEiJ_G0020908.1 mouse_genomes_project 14 74503238 74529767 + MGP_WSBEiJ_P0039309 Mtrf1 protein_coding protein_coding MGP_WSBEiJ_T0038714.1 MGP_WSBEiJ_G0020674.1 mouse_genomes_project 14 49918868 49921224 + MGP_WSBEiJ_P0038714 Tssk4 protein_coding protein_coding MGP_WSBEiJ_T0038715.1 MGP_WSBEiJ_G0020674.1 mouse_genomes_project 14 49918870 49921224 + MGP_WSBEiJ_P0038715 Tssk4 protein_coding protein_coding MGP_WSBEiJ_T0038716.1 MGP_WSBEiJ_G0020674.1 mouse_genomes_project 14 49919035 49921133 + MGP_WSBEiJ_P0038716 Tssk4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0038795.1 MGP_WSBEiJ_G0020721.1 mouse_genomes_project 14 51965817 51985758 - MGP_WSBEiJ_P0038795 Eef1akmt1 protein_coding protein_coding MGP_WSBEiJ_T0002475.1 MGP_WSBEiJ_G0002385.1 mouse_genomes_project 14 48376737 48376801 + MGP_WSBEiJ_P0002475 Traj42 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038945.1 MGP_WSBEiJ_G0020775.1 mouse_genomes_project 14 58225964 58246531 - MGP_WSBEiJ_P0038945 Mtmr9 protein_coding protein_coding MGP_WSBEiJ_T0039125.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65050417 65098176 - MGP_WSBEiJ_P0039125 Slc39a14 protein_coding protein_coding MGP_WSBEiJ_T0039126.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65053144 65095185 - MGP_WSBEiJ_P0039126 Slc39a14 protein_coding protein_coding MGP_WSBEiJ_T0039127.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65053158 65098176 - MGP_WSBEiJ_P0039127 Slc39a14 protein_coding protein_coding MGP_WSBEiJ_T0039128.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65055631 65058095 - Slc39a14 protein_coding retained_intron MGP_WSBEiJ_T0039129.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65057791 65060777 - Slc39a14 protein_coding retained_intron MGP_WSBEiJ_T0039130.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65060808 65098165 - Slc39a14 protein_coding retained_intron MGP_WSBEiJ_T0039131.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65061966 65095187 - Slc39a14 protein_coding retained_intron MGP_WSBEiJ_T0039132.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65062648 65081053 - MGP_WSBEiJ_P0039132 Slc39a14 protein_coding protein_coding MGP_WSBEiJ_T0039133.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65063321 65098145 - MGP_WSBEiJ_P0039133 Slc39a14 protein_coding protein_coding MGP_WSBEiJ_T0039134.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65063355 65070643 - MGP_WSBEiJ_P0039134 Slc39a14 protein_coding protein_coding MGP_WSBEiJ_T0039135.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65063416 65098166 - MGP_WSBEiJ_P0039135 Slc39a14 protein_coding protein_coding MGP_WSBEiJ_T0039136.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65065600 65078389 - MGP_WSBEiJ_P0039136 Slc39a14 protein_coding protein_coding MGP_WSBEiJ_T0039137.1 MGP_WSBEiJ_G0020847.1 mouse_genomes_project 14 65077947 65098176 - Slc39a14 protein_coding retained_intron MGP_WSBEiJ_T0096960.1 MGP_WSBEiJ_G0035641.1 mouse_genomes_project 14 70679444 70679536 - Gm24876 rRNA rRNA MGP_WSBEiJ_T0038898.1 MGP_WSBEiJ_G0020754.1 mouse_genomes_project 14 56182899 56191461 + MGP_WSBEiJ_P0038898 Trim13 protein_coding protein_coding MGP_WSBEiJ_T0099132.1 MGP_WSBEiJ_G0037795.1 mouse_genomes_project 14 115830823 115830954 + Gm22379 snoRNA snoRNA MGP_WSBEiJ_T0012703.1 MGP_WSBEiJ_G0010833.1 mouse_genomes_project 14 25517091 25518247 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037739.1 MGP_WSBEiJ_G0020402.1 mouse_genomes_project 14 19941379 19965426 + MGP_WSBEiJ_P0037739 Asb14 protein_coding protein_coding MGP_WSBEiJ_T0037740.1 MGP_WSBEiJ_G0020402.1 mouse_genomes_project 14 19941424 19964586 + MGP_WSBEiJ_P0037740 Asb14 protein_coding protein_coding MGP_WSBEiJ_T0037741.1 MGP_WSBEiJ_G0020402.1 mouse_genomes_project 14 19941434 19947743 + Asb14 protein_coding processed_transcript MGP_WSBEiJ_T0037742.1 MGP_WSBEiJ_G0020402.1 mouse_genomes_project 14 19941442 19949943 + MGP_WSBEiJ_P0037742 Asb14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037743.1 MGP_WSBEiJ_G0020402.1 mouse_genomes_project 14 19949892 19965427 + MGP_WSBEiJ_P0037743 Asb14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0038765.1 MGP_WSBEiJ_G0020707.1 mouse_genomes_project 14 50743468 50869943 + MGP_WSBEiJ_P0038765 Rnf17 protein_coding protein_coding MGP_WSBEiJ_T0099104.1 MGP_WSBEiJ_G0037767.1 mouse_genomes_project 14 62446244 62446376 + Gm24981 snoRNA snoRNA MGP_WSBEiJ_T0039445.1 MGP_WSBEiJ_G0020959.1 mouse_genomes_project 14 113914096 115002416 + MGP_WSBEiJ_P0039445 Gpc6 protein_coding protein_coding MGP_WSBEiJ_T0039446.1 MGP_WSBEiJ_G0020959.1 mouse_genomes_project 14 113914114 114635085 + Gpc6 protein_coding retained_intron MGP_WSBEiJ_T0039447.1 MGP_WSBEiJ_G0020959.1 mouse_genomes_project 14 113914229 114998915 + MGP_WSBEiJ_P0039447 Gpc6 protein_coding protein_coding MGP_WSBEiJ_T0039448.1 MGP_WSBEiJ_G0020959.1 mouse_genomes_project 14 113914330 114997777 + MGP_WSBEiJ_P0039448 Gpc6 protein_coding protein_coding MGP_WSBEiJ_T0039310.1 MGP_WSBEiJ_G0020909.1 mouse_genomes_project 14 74532625 74538595 + MGP_WSBEiJ_P0039310 Kbtbd7 protein_coding protein_coding MGP_WSBEiJ_T0002507.1 MGP_WSBEiJ_G0002417.1 mouse_genomes_project 14 48415451 48415513 + MGP_WSBEiJ_P0002507 Traj6 TR_J_gene TR_J_gene MGP_WSBEiJ_T0038678.1 MGP_WSBEiJ_G0020670.1 mouse_genomes_project 14 49870957 49877430 + MGP_WSBEiJ_P0038678 Irf9 protein_coding protein_coding MGP_WSBEiJ_T0038679.1 MGP_WSBEiJ_G0020670.1 mouse_genomes_project 14 49871371 49877430 + MGP_WSBEiJ_P0038679 Irf9 protein_coding protein_coding MGP_WSBEiJ_T0038680.1 MGP_WSBEiJ_G0020670.1 mouse_genomes_project 14 49871963 49873252 + Irf9 protein_coding retained_intron MGP_WSBEiJ_T0038681.1 MGP_WSBEiJ_G0020670.1 mouse_genomes_project 14 49871965 49877430 + MGP_WSBEiJ_P0038681 Irf9 protein_coding protein_coding MGP_WSBEiJ_T0038682.1 MGP_WSBEiJ_G0020670.1 mouse_genomes_project 14 49873211 49877427 + Irf9 protein_coding retained_intron MGP_WSBEiJ_T0038683.1 MGP_WSBEiJ_G0020670.1 mouse_genomes_project 14 49874674 49876133 + Irf9 protein_coding retained_intron MGP_WSBEiJ_T0037936.1 MGP_WSBEiJ_G0020448.1 mouse_genomes_project 14 24861081 24888882 + Btd protein_coding processed_transcript MGP_WSBEiJ_T0037937.1 MGP_WSBEiJ_G0020448.1 mouse_genomes_project 14 24861110 24890290 + MGP_WSBEiJ_P0037937 Btd protein_coding protein_coding MGP_WSBEiJ_T0011166.1 MGP_WSBEiJ_G0009323.1 mouse_genomes_project 14 10448480 10448806 - Gm24140 misc_RNA misc_RNA MGP_WSBEiJ_T0000891.1 MGP_WSBEiJ_G0000829.1 mouse_genomes_project 14 64189837 64194382 - TEC TEC MGP_WSBEiJ_T0038277.1 MGP_WSBEiJ_G0020563.1 mouse_genomes_project 14 44194026 44194977 - Olfr735 protein_coding transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0038278.1 MGP_WSBEiJ_G0020563.1 mouse_genomes_project 14 44194026 44195091 - MGP_WSBEiJ_P0038278 Olfr735 protein_coding protein_coding MGP_WSBEiJ_T0038279.1 MGP_WSBEiJ_G0020563.1 mouse_genomes_project 14 44194429 44198600 - Olfr735 protein_coding processed_transcript MGP_WSBEiJ_T0038845.1 MGP_WSBEiJ_G0020733.1 mouse_genomes_project 14 53824311 53847511 - MGP_WSBEiJ_P0038845 Phf11d protein_coding protein_coding MGP_WSBEiJ_T0038295.1 MGP_WSBEiJ_G0020577.1 mouse_genomes_project 14 44829716 44831243 - MGP_WSBEiJ_P0038295 A930018M24Rik protein_coding protein_coding MGP_WSBEiJ_T0037828.1 MGP_WSBEiJ_G0020428.1 mouse_genomes_project 14 24136584 24179298 + MGP_WSBEiJ_P0037828 Nek4 protein_coding protein_coding MGP_WSBEiJ_T0096954.1 MGP_WSBEiJ_G0035635.1 mouse_genomes_project 14 4832390 4832500 - n-R5s45 rRNA rRNA MGP_WSBEiJ_T0039109.1 MGP_WSBEiJ_G0020843.1 mouse_genomes_project 14 64887489 64892588 - MGP_WSBEiJ_P0039109 9930012K11Rik protein_coding protein_coding MGP_WSBEiJ_T0039110.1 MGP_WSBEiJ_G0020843.1 mouse_genomes_project 14 64887489 64892588 - MGP_WSBEiJ_P0039110 9930012K11Rik protein_coding protein_coding MGP_WSBEiJ_T0039111.1 MGP_WSBEiJ_G0020843.1 mouse_genomes_project 14 64887492 64890004 - 9930012K11Rik protein_coding retained_intron MGP_WSBEiJ_T0039112.1 MGP_WSBEiJ_G0020843.1 mouse_genomes_project 14 64887982 64889553 - MGP_WSBEiJ_P0039112 9930012K11Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039113.1 MGP_WSBEiJ_G0020843.1 mouse_genomes_project 14 64888115 64889896 - 9930012K11Rik protein_coding retained_intron MGP_WSBEiJ_T0039260.1 MGP_WSBEiJ_G0020889.1 mouse_genomes_project 14 70901218 70911343 + MGP_WSBEiJ_P0039260 Kctd4 protein_coding protein_coding MGP_WSBEiJ_T0039211.1 MGP_WSBEiJ_G0020873.1 mouse_genomes_project 14 68419389 68423588 + Sucla2 protein_coding processed_transcript MGP_WSBEiJ_T0039212.1 MGP_WSBEiJ_G0020873.1 mouse_genomes_project 14 68419565 68464803 + MGP_WSBEiJ_P0039212 Sucla2 protein_coding protein_coding MGP_WSBEiJ_T0039213.1 MGP_WSBEiJ_G0020873.1 mouse_genomes_project 14 68434822 68435412 + Sucla2 protein_coding retained_intron MGP_WSBEiJ_T0039214.1 MGP_WSBEiJ_G0020873.1 mouse_genomes_project 14 68459840 68460348 + Sucla2 protein_coding retained_intron MGP_WSBEiJ_T0039215.1 MGP_WSBEiJ_G0020873.1 mouse_genomes_project 14 68464760 68465497 + Sucla2 protein_coding processed_transcript MGP_WSBEiJ_T0037990.1 MGP_WSBEiJ_G0020460.1 mouse_genomes_project 14 25670712 25731477 - MGP_WSBEiJ_P0037990 Chat protein_coding protein_coding MGP_WSBEiJ_T0039209.1 MGP_WSBEiJ_G0020871.1 mouse_genomes_project 14 68364962 68368107 - MGP_WSBEiJ_P0039209 protein_coding protein_coding MGP_WSBEiJ_T0038728.1 MGP_WSBEiJ_G0020681.1 mouse_genomes_project 14 50010119 50010760 - Dhrs1 protein_coding retained_intron MGP_WSBEiJ_T0038729.1 MGP_WSBEiJ_G0020681.1 mouse_genomes_project 14 50010119 50016724 - Dhrs1 protein_coding retained_intron MGP_WSBEiJ_T0038730.1 MGP_WSBEiJ_G0020681.1 mouse_genomes_project 14 50010121 50016815 - MGP_WSBEiJ_P0038730 Dhrs1 protein_coding protein_coding MGP_WSBEiJ_T0038731.1 MGP_WSBEiJ_G0020681.1 mouse_genomes_project 14 50010333 50011244 - Dhrs1 protein_coding retained_intron MGP_WSBEiJ_T0097863.1 MGP_WSBEiJ_G0036526.1 mouse_genomes_project 14 88898510 88898672 - Gm23509 snRNA snRNA MGP_WSBEiJ_T0037607.1 MGP_WSBEiJ_G0020371.1 mouse_genomes_project 14 14546620 14594703 + MGP_WSBEiJ_P0037607 Samd8 protein_coding protein_coding MGP_WSBEiJ_T0037608.1 MGP_WSBEiJ_G0020371.1 mouse_genomes_project 14 14546637 14594703 + MGP_WSBEiJ_P0037608 Samd8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037609.1 MGP_WSBEiJ_G0020371.1 mouse_genomes_project 14 14546649 14594642 + MGP_WSBEiJ_P0037609 Samd8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037610.1 MGP_WSBEiJ_G0020371.1 mouse_genomes_project 14 14547641 14600135 + MGP_WSBEiJ_P0037610 Samd8 protein_coding protein_coding MGP_WSBEiJ_T0037611.1 MGP_WSBEiJ_G0020371.1 mouse_genomes_project 14 14593272 14594376 + Samd8 protein_coding retained_intron MGP_WSBEiJ_T0037998.1 MGP_WSBEiJ_G0020465.1 mouse_genomes_project 14 26073063 26108047 + MGP_WSBEiJ_P0037998 1810011H11Rik protein_coding protein_coding MGP_WSBEiJ_T0006578.1 MGP_WSBEiJ_G0005441.1 mouse_genomes_project 14 28132733 28141500 + A930038B10Rik lincRNA lincRNA MGP_WSBEiJ_T0006579.1 MGP_WSBEiJ_G0005441.1 mouse_genomes_project 14 28133558 28146893 + A930038B10Rik lincRNA lincRNA MGP_WSBEiJ_T0016790.1 MGP_WSBEiJ_G0014689.1 mouse_genomes_project 14 38526312 38532397 - 4930431P03Rik processed_transcript retained_intron MGP_WSBEiJ_T0016791.1 MGP_WSBEiJ_G0014689.1 mouse_genomes_project 14 38527512 38532397 - 4930431P03Rik processed_transcript antisense MGP_WSBEiJ_T0097869.1 MGP_WSBEiJ_G0036532.1 mouse_genomes_project 14 95884226 95884412 - Gm22970 snRNA snRNA MGP_WSBEiJ_T0002450.1 MGP_WSBEiJ_G0002364.1 mouse_genomes_project 14 48329265 48329281 + MGP_WSBEiJ_P0002450 Trdd2 TR_D_gene TR_D_gene MGP_WSBEiJ_T0002596.1 MGP_WSBEiJ_G0002491.1 mouse_genomes_project 14 48007670 48008147 + MGP_WSBEiJ_P0002596 Trav17 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002597.1 MGP_WSBEiJ_G0002491.1 mouse_genomes_project 14 48007670 48008147 + MGP_WSBEiJ_P0002597 Trav17 TR_V_gene TR_V_gene MGP_WSBEiJ_T0096962.1 MGP_WSBEiJ_G0035643.1 mouse_genomes_project 14 73341196 73341311 - Gm26197 rRNA rRNA MGP_WSBEiJ_T0038761.1 MGP_WSBEiJ_G0020703.1 mouse_genomes_project 14 50540322 50547657 - MGP_WSBEiJ_P0038761 Gzmf protein_coding protein_coding MGP_WSBEiJ_T0038744.1 MGP_WSBEiJ_G0020689.1 mouse_genomes_project 14 50120501 50143392 + MGP_WSBEiJ_P0038744 Nynrin protein_coding protein_coding MGP_WSBEiJ_T0038745.1 MGP_WSBEiJ_G0020689.1 mouse_genomes_project 14 50120580 50143836 + MGP_WSBEiJ_P0038745 Nynrin protein_coding protein_coding MGP_WSBEiJ_T0037673.1 MGP_WSBEiJ_G0020384.1 mouse_genomes_project 14 18753976 18800462 + MGP_WSBEiJ_P0037673 Anxa11 protein_coding protein_coding MGP_WSBEiJ_T0037674.1 MGP_WSBEiJ_G0020384.1 mouse_genomes_project 14 18754003 18791789 + Anxa11 protein_coding retained_intron MGP_WSBEiJ_T0037675.1 MGP_WSBEiJ_G0020384.1 mouse_genomes_project 14 18754003 18800462 + Anxa11 protein_coding retained_intron MGP_WSBEiJ_T0037676.1 MGP_WSBEiJ_G0020384.1 mouse_genomes_project 14 18754003 18792182 + MGP_WSBEiJ_P0037676 Anxa11 protein_coding protein_coding MGP_WSBEiJ_T0039538.1 MGP_WSBEiJ_G0020994.1 mouse_genomes_project 14 121173653 121912710 - MGP_WSBEiJ_P0039538 Fgf14 protein_coding protein_coding MGP_WSBEiJ_T0039539.1 MGP_WSBEiJ_G0020994.1 mouse_genomes_project 14 121174037 121400212 - MGP_WSBEiJ_P0039539 Fgf14 protein_coding protein_coding MGP_WSBEiJ_T0002662.1 MGP_WSBEiJ_G0002546.1 mouse_genomes_project 14 47972753 47973024 + TR_V_pseudogene TR_V_pseudogene MGP_WSBEiJ_T0037444.1 MGP_WSBEiJ_G0020321.1 mouse_genomes_project 14 6582488 6591244 - MGP_WSBEiJ_P0037444 Psmd6 protein_coding protein_coding MGP_WSBEiJ_T0037445.1 MGP_WSBEiJ_G0020321.1 mouse_genomes_project 14 6584214 6586854 - Psmd6 protein_coding retained_intron MGP_WSBEiJ_T0037446.1 MGP_WSBEiJ_G0020321.1 mouse_genomes_project 14 6586498 6587651 - Psmd6 protein_coding retained_intron MGP_WSBEiJ_T0037447.1 MGP_WSBEiJ_G0020321.1 mouse_genomes_project 14 6589931 6591193 - Psmd6 protein_coding retained_intron MGP_WSBEiJ_T0006635.1 MGP_WSBEiJ_G0005483.1 mouse_genomes_project 14 115787159 115794546 - Gm27198 lincRNA lincRNA MGP_WSBEiJ_T0099111.1 MGP_WSBEiJ_G0037774.1 mouse_genomes_project 14 82849901 82850044 + Gm23278 snoRNA snoRNA MGP_WSBEiJ_T0039061.1 MGP_WSBEiJ_G0020817.1 mouse_genomes_project 14 62599617 62623353 + MGP_WSBEiJ_P0039061 Kctd9 protein_coding protein_coding MGP_WSBEiJ_T0039062.1 MGP_WSBEiJ_G0020817.1 mouse_genomes_project 14 62599778 62626006 + MGP_WSBEiJ_P0039062 Kctd9 protein_coding protein_coding MGP_WSBEiJ_T0039063.1 MGP_WSBEiJ_G0020817.1 mouse_genomes_project 14 62599820 62613380 + MGP_WSBEiJ_P0039063 Kctd9 protein_coding protein_coding MGP_WSBEiJ_T0039064.1 MGP_WSBEiJ_G0020817.1 mouse_genomes_project 14 62599965 62625857 + MGP_WSBEiJ_P0039064 Kctd9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039065.1 MGP_WSBEiJ_G0020817.1 mouse_genomes_project 14 62600017 62624107 + MGP_WSBEiJ_P0039065 Kctd9 protein_coding protein_coding MGP_WSBEiJ_T0039312.1 MGP_WSBEiJ_G0020911.1 mouse_genomes_project 14 74569299 74592832 - MGP_WSBEiJ_P0039312 Wbp4 protein_coding protein_coding MGP_WSBEiJ_T0006632.1 MGP_WSBEiJ_G0005480.1 mouse_genomes_project 14 115139894 115149150 + Gm26773 lincRNA lincRNA MGP_WSBEiJ_T0036488.1 MGP_WSBEiJ_G0019986.1 mouse_genomes_project 13 60697613 60703287 - MGP_WSBEiJ_P0036488 Cts7 protein_coding protein_coding MGP_WSBEiJ_T0099035.1 MGP_WSBEiJ_G0037698.1 mouse_genomes_project 13 8006576 8006696 - Gm25496 snoRNA snoRNA MGP_WSBEiJ_T0037246.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 109635517 110053587 + Pde4d protein_coding processed_transcript MGP_WSBEiJ_T0037247.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 109635578 110052602 + Pde4d protein_coding processed_transcript MGP_WSBEiJ_T0037248.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 109838366 111179909 + MGP_WSBEiJ_P0037248 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037249.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110052624 111179779 + MGP_WSBEiJ_P0037249 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037250.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110329632 110557679 + Pde4d protein_coding processed_transcript MGP_WSBEiJ_T0037251.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110329760 110995299 + Pde4d protein_coding retained_intron MGP_WSBEiJ_T0037252.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110330042 111179822 + MGP_WSBEiJ_P0037252 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037253.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110480618 111179799 + MGP_WSBEiJ_P0037253 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037254.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110656141 111179799 + MGP_WSBEiJ_P0037254 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037255.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110804821 111179779 + MGP_WSBEiJ_P0037255 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037256.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110861098 111179799 + MGP_WSBEiJ_P0037256 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037257.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110913232 111179909 + MGP_WSBEiJ_P0037257 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037258.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110913252 110995296 + Pde4d protein_coding retained_intron MGP_WSBEiJ_T0037259.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 110984870 110989262 + Pde4d protein_coding processed_transcript MGP_WSBEiJ_T0037260.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 111128021 111179822 + MGP_WSBEiJ_P0037260 Pde4d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037261.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 111128025 111181908 + MGP_WSBEiJ_P0037261 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037262.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 111147836 111165504 + Pde4d protein_coding retained_intron MGP_WSBEiJ_T0037263.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 111149988 111179779 + MGP_WSBEiJ_P0037263 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037264.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 111151769 111179799 + MGP_WSBEiJ_P0037264 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0037265.1 MGP_WSBEiJ_G0020243.1 mouse_genomes_project 13 111161420 111176782 + MGP_WSBEiJ_P0037265 Pde4d protein_coding protein_coding MGP_WSBEiJ_T0036874.1 MGP_WSBEiJ_G0020123.1 mouse_genomes_project 13 90990650 90991016 + MGP_WSBEiJ_P0036874 Gm21726 protein_coding protein_coding MGP_WSBEiJ_T0097793.1 MGP_WSBEiJ_G0036456.1 mouse_genomes_project 13 11485078 11485191 - Gm25444 snRNA snRNA MGP_WSBEiJ_T0000850.1 MGP_WSBEiJ_G0000788.1 mouse_genomes_project 13 47080935 47083325 - TEC TEC MGP_WSBEiJ_T0035764.1 MGP_WSBEiJ_G0019732.1 mouse_genomes_project 13 25057780 25067962 - MGP_WSBEiJ_P0035764 Prl7b1 protein_coding protein_coding MGP_WSBEiJ_T0035528.1 MGP_WSBEiJ_G0019602.1 mouse_genomes_project 13 16721029 16726553 - MGP_WSBEiJ_P0035528 A530099J19Rik protein_coding protein_coding MGP_WSBEiJ_T0097827.1 MGP_WSBEiJ_G0036490.1 mouse_genomes_project 13 116620155 116620262 + Gm25985 snRNA snRNA MGP_WSBEiJ_T0035927.1 MGP_WSBEiJ_G0019801.1 mouse_genomes_project 13 36702101 36715241 - MGP_WSBEiJ_P0035927 Eef1e1 protein_coding protein_coding MGP_WSBEiJ_T0036092.1 MGP_WSBEiJ_G0019860.1 mouse_genomes_project 13 47929210 47975186 + MGP_WSBEiJ_P0036092 Bicd2 protein_coding protein_coding MGP_WSBEiJ_T0036093.1 MGP_WSBEiJ_G0019860.1 mouse_genomes_project 13 47929210 47975186 + MGP_WSBEiJ_P0036093 Bicd2 protein_coding protein_coding MGP_WSBEiJ_T0036094.1 MGP_WSBEiJ_G0019860.1 mouse_genomes_project 13 47929210 47975186 + MGP_WSBEiJ_P0036094 Bicd2 protein_coding protein_coding MGP_WSBEiJ_T0037003.1 MGP_WSBEiJ_G0020167.1 mouse_genomes_project 13 97010193 97040528 + MGP_WSBEiJ_P0037003 Poc5 protein_coding protein_coding MGP_WSBEiJ_T0009771.1 MGP_WSBEiJ_G0007928.1 mouse_genomes_project 13 29346768 29346866 - Gm27516 miRNA miRNA MGP_WSBEiJ_T0037289.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113825150 113871082 + MGP_WSBEiJ_P0037289 Il6st protein_coding protein_coding MGP_WSBEiJ_T0037290.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113825161 113865498 + MGP_WSBEiJ_P0037290 Il6st protein_coding protein_coding MGP_WSBEiJ_T0037291.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113825192 113844562 + MGP_WSBEiJ_P0037291 Il6st protein_coding protein_coding MGP_WSBEiJ_T0037292.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113825321 113865552 + MGP_WSBEiJ_P0037292 Il6st protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037293.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113828651 113841028 + MGP_WSBEiJ_P0037293 Il6st protein_coding protein_coding MGP_WSBEiJ_T0037294.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113833657 113862115 + MGP_WSBEiJ_P0037294 Il6st protein_coding protein_coding MGP_WSBEiJ_T0037295.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113836012 113867858 + MGP_WSBEiJ_P0037295 Il6st protein_coding protein_coding MGP_WSBEiJ_T0037296.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113836050 113865452 + MGP_WSBEiJ_P0037296 Il6st protein_coding protein_coding MGP_WSBEiJ_T0037297.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113836050 113864766 + MGP_WSBEiJ_P0037297 Il6st protein_coding protein_coding MGP_WSBEiJ_T0037298.1 MGP_WSBEiJ_G0020252.1 mouse_genomes_project 13 113836050 113864766 + MGP_WSBEiJ_P0037298 Il6st protein_coding protein_coding MGP_WSBEiJ_T0002543.1 MGP_WSBEiJ_G0002450.1 mouse_genomes_project 13 16119138 16119671 + MGP_WSBEiJ_P0002543 Tcrg-V4 TR_V_gene TR_V_gene MGP_WSBEiJ_T0099046.1 MGP_WSBEiJ_G0037709.1 mouse_genomes_project 13 43155472 43155591 - Gm22213 snoRNA snoRNA MGP_WSBEiJ_T0036483.1 MGP_WSBEiJ_G0019982.1 mouse_genomes_project 13 60342162 60348735 - MGP_WSBEiJ_P0036483 Ctsq protein_coding protein_coding MGP_WSBEiJ_T0036484.1 MGP_WSBEiJ_G0019982.1 mouse_genomes_project 13 60342172 60346326 - Ctsq protein_coding retained_intron MGP_WSBEiJ_T0035914.1 MGP_WSBEiJ_G0019794.1 mouse_genomes_project 13 36021847 36052375 - MGP_WSBEiJ_P0035914 Cage1 protein_coding protein_coding MGP_WSBEiJ_T0035915.1 MGP_WSBEiJ_G0019794.1 mouse_genomes_project 13 36038667 36052366 - MGP_WSBEiJ_P0035915 Cage1 protein_coding protein_coding MGP_WSBEiJ_T0036995.1 MGP_WSBEiJ_G0020161.1 mouse_genomes_project 13 96068312 96069676 - MGP_WSBEiJ_P0036995 S100z protein_coding protein_coding MGP_WSBEiJ_T0009795.1 MGP_WSBEiJ_G0007952.1 mouse_genomes_project 13 70910458 70910579 + Mir466f-4 miRNA miRNA MGP_WSBEiJ_T0037305.1 MGP_WSBEiJ_G0020257.1 mouse_genomes_project 13 114252252 114312765 - MGP_WSBEiJ_P0037305 Skiv2l2 protein_coding protein_coding MGP_WSBEiJ_T0003439.1 MGP_WSBEiJ_G0003137.1 mouse_genomes_project 13 120396585 120416497 - Gm16263 antisense antisense MGP_WSBEiJ_T0097165.1 MGP_WSBEiJ_G0035846.1 mouse_genomes_project 13 31490560 31490772 + Gm25043 ribozyme ribozyme MGP_WSBEiJ_T0035678.1 MGP_WSBEiJ_G0019701.1 mouse_genomes_project 13 21240123 21240507 - MGP_WSBEiJ_P0035678 Hist1h2ba protein_coding protein_coding MGP_WSBEiJ_T0100550.1 MGP_WSBEiJ_G0039008.1 mouse_genomes_project 13 24778573 24781621 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036703.1 MGP_WSBEiJ_G0020081.1 mouse_genomes_project 13 74078417 74124080 + MGP_WSBEiJ_P0036703 Slc9a3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036704.1 MGP_WSBEiJ_G0020081.1 mouse_genomes_project 13 74078417 74122981 + MGP_WSBEiJ_P0036704 Slc9a3 protein_coding protein_coding MGP_WSBEiJ_T0035748.1 MGP_WSBEiJ_G0019723.1 mouse_genomes_project 13 24686310 24694133 + MGP_WSBEiJ_P0035748 Prl3b1 protein_coding protein_coding MGP_WSBEiJ_T0096950.1 MGP_WSBEiJ_G0035631.1 mouse_genomes_project 13 97528821 97528936 + Gm27792 rRNA rRNA MGP_WSBEiJ_T0097825.1 MGP_WSBEiJ_G0036488.1 mouse_genomes_project 13 107862832 107862939 - Gm24527 snRNA snRNA MGP_WSBEiJ_T0100539.1 MGP_WSBEiJ_G0038997.1 mouse_genomes_project 13 20074456 20075331 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0037000.1 MGP_WSBEiJ_G0020166.1 mouse_genomes_project 13 96563107 96749016 - MGP_WSBEiJ_P0037000 Sv2c protein_coding protein_coding MGP_WSBEiJ_T0037001.1 MGP_WSBEiJ_G0020166.1 mouse_genomes_project 13 96569273 96593792 - Sv2c protein_coding processed_transcript MGP_WSBEiJ_T0037002.1 MGP_WSBEiJ_G0020166.1 mouse_genomes_project 13 96584770 96703041 - MGP_WSBEiJ_P0037002 Sv2c protein_coding protein_coding MGP_WSBEiJ_T0035361.1 MGP_WSBEiJ_G0019554.1 mouse_genomes_project 13 2956772 2960734 + MGP_WSBEiJ_P0035361 Gm28465 protein_coding protein_coding MGP_WSBEiJ_T0035666.1 MGP_WSBEiJ_G0019695.1 mouse_genomes_project 13 21061255 21061897 + MGP_WSBEiJ_P0035666 Hist1h1a protein_coding protein_coding MGP_WSBEiJ_T0006451.1 MGP_WSBEiJ_G0005354.1 mouse_genomes_project 13 35427243 35428946 - Gm29459 lincRNA lincRNA MGP_WSBEiJ_T0006425.1 MGP_WSBEiJ_G0005337.1 mouse_genomes_project 13 23691584 23721903 - 1700092E19Rik lincRNA lincRNA MGP_WSBEiJ_T0006426.1 MGP_WSBEiJ_G0005337.1 mouse_genomes_project 13 23715337 23721844 - 1700092E19Rik lincRNA lincRNA MGP_WSBEiJ_T0009798.1 MGP_WSBEiJ_G0007955.1 mouse_genomes_project 13 83909523 83909595 + Mir9-2 miRNA miRNA MGP_WSBEiJ_T0036366.1 MGP_WSBEiJ_G0019944.1 mouse_genomes_project 13 55500617 55503581 - MGP_WSBEiJ_P0036366 Il9 protein_coding protein_coding MGP_WSBEiJ_T0097809.1 MGP_WSBEiJ_G0036472.1 mouse_genomes_project 13 41684109 41684218 - Gm26064 snRNA snRNA MGP_WSBEiJ_T0035658.1 MGP_WSBEiJ_G0019687.1 mouse_genomes_project 13 21034880 21036441 + MGP_WSBEiJ_P0035658 Hist1h1c protein_coding protein_coding MGP_WSBEiJ_T0035580.1 MGP_WSBEiJ_G0019629.1 mouse_genomes_project 13 18775042 18775915 + MGP_WSBEiJ_P0035580 Hist1h2ai protein_coding protein_coding MGP_WSBEiJ_T0099041.1 MGP_WSBEiJ_G0037704.1 mouse_genomes_project 13 22147812 22147934 - Gm22358 snoRNA snoRNA MGP_WSBEiJ_T0035616.1 MGP_WSBEiJ_G0019655.1 mouse_genomes_project 13 19529395 19530499 + MGP_WSBEiJ_P0035616 Vmn1r199 protein_coding protein_coding MGP_WSBEiJ_T0035608.1 MGP_WSBEiJ_G0019647.1 mouse_genomes_project 13 19314420 19315317 - MGP_WSBEiJ_P0035608 Vmn1r191 protein_coding protein_coding MGP_WSBEiJ_T0099036.1 MGP_WSBEiJ_G0037699.1 mouse_genomes_project 13 9258341 9258529 + Gm25804 snoRNA snoRNA MGP_WSBEiJ_T0037027.1 MGP_WSBEiJ_G0020173.1 mouse_genomes_project 13 97556703 97583600 + MGP_WSBEiJ_P0037027 Gcnt4 protein_coding protein_coding MGP_WSBEiJ_T0037382.1 MGP_WSBEiJ_G0020297.1 mouse_genomes_project 13 121586177 121586905 - MGP_WSBEiJ_P0037382 protein_coding protein_coding MGP_WSBEiJ_T0006480.1 MGP_WSBEiJ_G0005372.1 mouse_genomes_project 13 52220576 52231339 - Gm43262 lincRNA lincRNA MGP_WSBEiJ_T0036063.1 MGP_WSBEiJ_G0019852.1 mouse_genomes_project 13 47204704 47208214 + MGP_WSBEiJ_P0036063 Barx1 protein_coding protein_coding MGP_WSBEiJ_T0006438.1 MGP_WSBEiJ_G0005346.1 mouse_genomes_project 13 29063751 29084029 - G630018N14Rik lincRNA lincRNA MGP_WSBEiJ_T0006439.1 MGP_WSBEiJ_G0005346.1 mouse_genomes_project 13 29077369 29082666 - G630018N14Rik lincRNA lincRNA MGP_WSBEiJ_T0096773.1 MGP_WSBEiJ_G0035454.1 mouse_genomes_project 13 335876 353333 + pseudogene pseudogene MGP_WSBEiJ_T0036828.1 MGP_WSBEiJ_G0020115.1 mouse_genomes_project 13 85403021 85428798 + MGP_WSBEiJ_P0036828 Ccnh protein_coding protein_coding MGP_WSBEiJ_T0036829.1 MGP_WSBEiJ_G0020115.1 mouse_genomes_project 13 85403048 85417094 + MGP_WSBEiJ_P0036829 Ccnh protein_coding protein_coding MGP_WSBEiJ_T0036830.1 MGP_WSBEiJ_G0020115.1 mouse_genomes_project 13 85403061 85427772 + MGP_WSBEiJ_P0036830 Ccnh protein_coding protein_coding MGP_WSBEiJ_T0036831.1 MGP_WSBEiJ_G0020115.1 mouse_genomes_project 13 85403090 85428068 + MGP_WSBEiJ_P0036831 Ccnh protein_coding protein_coding MGP_WSBEiJ_T0036832.1 MGP_WSBEiJ_G0020115.1 mouse_genomes_project 13 85417081 85438546 + MGP_WSBEiJ_P0036832 Ccnh protein_coding protein_coding MGP_WSBEiJ_T0036833.1 MGP_WSBEiJ_G0020115.1 mouse_genomes_project 13 85426482 85428267 + Ccnh protein_coding processed_transcript MGP_WSBEiJ_T0036834.1 MGP_WSBEiJ_G0020115.1 mouse_genomes_project 13 85426944 85428063 + Ccnh protein_coding retained_intron MGP_WSBEiJ_T0009782.1 MGP_WSBEiJ_G0007939.1 mouse_genomes_project 13 54433395 54433491 - Mir6944 miRNA miRNA MGP_WSBEiJ_T0099074.1 MGP_WSBEiJ_G0037737.1 mouse_genomes_project 13 119724004 119724134 + Gm26349 snoRNA snoRNA MGP_WSBEiJ_T0003382.1 MGP_WSBEiJ_G0003106.1 mouse_genomes_project 13 53086343 53089928 - Gm16578 antisense antisense MGP_WSBEiJ_T0036894.1 MGP_WSBEiJ_G0020129.1 mouse_genomes_project 13 92254166 92265074 - MGP_WSBEiJ_P0036894 Zcchc9 protein_coding protein_coding MGP_WSBEiJ_T0036895.1 MGP_WSBEiJ_G0020129.1 mouse_genomes_project 13 92254167 92265074 - Zcchc9 protein_coding retained_intron MGP_WSBEiJ_T0036896.1 MGP_WSBEiJ_G0020129.1 mouse_genomes_project 13 92254167 92258614 - MGP_WSBEiJ_P0036896 Zcchc9 protein_coding protein_coding MGP_WSBEiJ_T0036897.1 MGP_WSBEiJ_G0020129.1 mouse_genomes_project 13 92256467 92265030 - Zcchc9 protein_coding retained_intron MGP_WSBEiJ_T0036898.1 MGP_WSBEiJ_G0020129.1 mouse_genomes_project 13 92258118 92258629 - Zcchc9 protein_coding retained_intron MGP_WSBEiJ_T0036690.1 MGP_WSBEiJ_G0020074.1 mouse_genomes_project 13 73756778 73788300 - MGP_WSBEiJ_P0036690 Nkd2 protein_coding protein_coding MGP_WSBEiJ_T0036691.1 MGP_WSBEiJ_G0020074.1 mouse_genomes_project 13 73757935 73788281 - MGP_WSBEiJ_P0036691 Nkd2 protein_coding protein_coding MGP_WSBEiJ_T0036692.1 MGP_WSBEiJ_G0020074.1 mouse_genomes_project 13 73761778 73788281 - Nkd2 protein_coding retained_intron MGP_WSBEiJ_T0036127.1 MGP_WSBEiJ_G0019872.1 mouse_genomes_project 13 49752671 49808072 + MGP_WSBEiJ_P0036127 Spin1 protein_coding protein_coding MGP_WSBEiJ_T0035436.1 MGP_WSBEiJ_G0019567.1 mouse_genomes_project 13 6444085 6957040 - MGP_WSBEiJ_P0035436 Chrm3 protein_coding protein_coding MGP_WSBEiJ_T0035437.1 MGP_WSBEiJ_G0019567.1 mouse_genomes_project 13 6445828 6447598 - MGP_WSBEiJ_P0035437 Chrm3 protein_coding protein_coding MGP_WSBEiJ_T0035438.1 MGP_WSBEiJ_G0019567.1 mouse_genomes_project 13 6808239 6956759 - Chrm3 protein_coding processed_transcript MGP_WSBEiJ_T0012660.1 MGP_WSBEiJ_G0010790.1 mouse_genomes_project 13 78345642 78346633 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016759.1 MGP_WSBEiJ_G0014670.1 mouse_genomes_project 13 32574865 32589658 + Gm15908 processed_transcript processed_transcript MGP_WSBEiJ_T0036734.1 MGP_WSBEiJ_G0020094.1 mouse_genomes_project 13 75872758 75946447 - MGP_WSBEiJ_P0036734 Rhobtb3 protein_coding protein_coding MGP_WSBEiJ_T0036735.1 MGP_WSBEiJ_G0020094.1 mouse_genomes_project 13 75875271 75893700 - Rhobtb3 protein_coding processed_transcript MGP_WSBEiJ_T0036736.1 MGP_WSBEiJ_G0020094.1 mouse_genomes_project 13 75916944 75946505 - MGP_WSBEiJ_P0036736 Rhobtb3 protein_coding protein_coding MGP_WSBEiJ_T0011161.1 MGP_WSBEiJ_G0009318.1 mouse_genomes_project 13 99797758 99798011 - Gm24733 misc_RNA misc_RNA MGP_WSBEiJ_T0035965.1 MGP_WSBEiJ_G0019820.1 mouse_genomes_project 13 40513098 40519848 + MGP_WSBEiJ_P0035965 Edn1 protein_coding protein_coding MGP_WSBEiJ_T0012609.1 MGP_WSBEiJ_G0010739.1 mouse_genomes_project 13 21639478 21639925 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006537.1 MGP_WSBEiJ_G0005414.1 mouse_genomes_project 13 112655070 112661904 - Gm6270 lincRNA lincRNA MGP_WSBEiJ_T0037187.1 MGP_WSBEiJ_G0020224.1 mouse_genomes_project 13 105237961 105258447 + MGP_WSBEiJ_P0037187 Cenpk protein_coding unknown_likely_coding MGP_WSBEiJ_T0037188.1 MGP_WSBEiJ_G0020224.1 mouse_genomes_project 13 105237964 105256175 + MGP_WSBEiJ_P0037188 Cenpk protein_coding protein_coding MGP_WSBEiJ_T0037189.1 MGP_WSBEiJ_G0020224.1 mouse_genomes_project 13 105238397 105258543 + MGP_WSBEiJ_P0037189 Cenpk protein_coding protein_coding MGP_WSBEiJ_T0097813.1 MGP_WSBEiJ_G0036476.1 mouse_genomes_project 13 45327857 45327961 + Gm22960 snRNA snRNA MGP_WSBEiJ_T0035354.1 MGP_WSBEiJ_G0019550.1 mouse_genomes_project 13 1084116 1096565 + MGP_WSBEiJ_P0035354 Akr1c21 protein_coding protein_coding MGP_WSBEiJ_T0035355.1 MGP_WSBEiJ_G0019550.1 mouse_genomes_project 13 1087159 1091343 + Akr1c21 protein_coding retained_intron MGP_WSBEiJ_T0036066.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47609996 47722187 - MGP_WSBEiJ_P0036066 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036067.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47609996 47722185 - MGP_WSBEiJ_P0036067 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036068.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47609996 47722187 - MGP_WSBEiJ_P0036068 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036069.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47609996 47722187 - MGP_WSBEiJ_P0036069 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036070.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47610002 47721405 - MGP_WSBEiJ_P0036070 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036071.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47610003 47721405 - MGP_WSBEiJ_P0036071 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036072.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47611302 47633398 - MGP_WSBEiJ_P0036072 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036073.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47611313 47650541 - MGP_WSBEiJ_P0036073 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036074.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47611674 47722187 - MGP_WSBEiJ_P0036074 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036075.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47612567 47722187 - MGP_WSBEiJ_P0036075 Wnk2 protein_coding protein_coding MGP_WSBEiJ_T0036076.1 MGP_WSBEiJ_G0019855.1 mouse_genomes_project 13 47633843 47643515 - MGP_WSBEiJ_P0036076 Wnk2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009768.1 MGP_WSBEiJ_G0007925.1 mouse_genomes_project 13 21042899 21043037 + Gm44314 miRNA miRNA MGP_WSBEiJ_T0036537.1 MGP_WSBEiJ_G0019998.1 mouse_genomes_project 13 63662977 63682385 - MGP_WSBEiJ_P0036537 Zfp367 protein_coding protein_coding MGP_WSBEiJ_T0036538.1 MGP_WSBEiJ_G0019998.1 mouse_genomes_project 13 63665362 63681615 - Zfp367 protein_coding processed_transcript MGP_WSBEiJ_T0036539.1 MGP_WSBEiJ_G0019998.1 mouse_genomes_project 13 63665489 63679405 - Zfp367 protein_coding processed_transcript MGP_WSBEiJ_T0036540.1 MGP_WSBEiJ_G0019998.1 mouse_genomes_project 13 63670441 63682385 - MGP_WSBEiJ_P0036540 Zfp367 protein_coding protein_coding MGP_WSBEiJ_T0036476.1 MGP_WSBEiJ_G0019976.1 mouse_genomes_project 13 60104126 60108721 - MGP_WSBEiJ_P0036476 Ctsll3 protein_coding protein_coding MGP_WSBEiJ_T0035562.1 MGP_WSBEiJ_G0019616.1 mouse_genomes_project 13 18526167 18527630 - MGP_WSBEiJ_P0035562 Nkapl protein_coding protein_coding MGP_WSBEiJ_T0035648.1 MGP_WSBEiJ_G0019681.1 mouse_genomes_project 13 20863971 20864364 + MGP_WSBEiJ_P0035648 Hist1h4d protein_coding protein_coding MGP_WSBEiJ_T0009756.1 MGP_WSBEiJ_G0007913.1 mouse_genomes_project 13 2531104 2531201 - Gm26259 miRNA miRNA MGP_WSBEiJ_T0035795.1 MGP_WSBEiJ_G0019746.1 mouse_genomes_project 13 28224760 28229780 - MGP_WSBEiJ_P0035795 Uqcrfs1 protein_coding protein_coding MGP_WSBEiJ_T0036678.1 MGP_WSBEiJ_G0020069.1 mouse_genomes_project 13 73523213 73539848 + MGP_WSBEiJ_P0036678 Clptm1l protein_coding protein_coding MGP_WSBEiJ_T0036634.1 MGP_WSBEiJ_G0020050.1 mouse_genomes_project 13 68295851 68305903 + MGP_WSBEiJ_P0036634 Fastkd3 protein_coding protein_coding MGP_WSBEiJ_T0036635.1 MGP_WSBEiJ_G0020050.1 mouse_genomes_project 13 68296063 68305911 + MGP_WSBEiJ_P0036635 Fastkd3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035460.1 MGP_WSBEiJ_G0019580.1 mouse_genomes_project 13 10619222 10641583 + Gng4 protein_coding processed_transcript MGP_WSBEiJ_T0035461.1 MGP_WSBEiJ_G0019580.1 mouse_genomes_project 13 10619503 10664305 + MGP_WSBEiJ_P0035461 Gng4 protein_coding protein_coding MGP_WSBEiJ_T0097815.1 MGP_WSBEiJ_G0036478.1 mouse_genomes_project 13 60229262 60229361 + Gm24594 snRNA snRNA MGP_WSBEiJ_T0099050.1 MGP_WSBEiJ_G0037713.1 mouse_genomes_project 13 48286563 48286696 + Gm25394 snoRNA snoRNA MGP_WSBEiJ_T0100559.1 MGP_WSBEiJ_G0039017.1 mouse_genomes_project 13 31587941 31588749 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036496.1 MGP_WSBEiJ_G0019992.1 mouse_genomes_project 13 62515611 62794898 + MGP_WSBEiJ_P0036496 2010111I01Rik protein_coding protein_coding MGP_WSBEiJ_T0036497.1 MGP_WSBEiJ_G0019992.1 mouse_genomes_project 13 62515844 62797527 + MGP_WSBEiJ_P0036497 2010111I01Rik protein_coding protein_coding MGP_WSBEiJ_T0036498.1 MGP_WSBEiJ_G0019992.1 mouse_genomes_project 13 62774710 62821346 + MGP_WSBEiJ_P0036498 2010111I01Rik protein_coding protein_coding MGP_WSBEiJ_T0036404.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57578950 57589297 - MGP_WSBEiJ_P0036404 Hnrnpk protein_coding protein_coding MGP_WSBEiJ_T0036405.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57580855 57588645 - MGP_WSBEiJ_P0036405 Hnrnpk protein_coding protein_coding MGP_WSBEiJ_T0036406.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57581047 57582228 - Hnrnpk protein_coding retained_intron MGP_WSBEiJ_T0036407.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57581110 57583573 - Hnrnpk protein_coding retained_intron MGP_WSBEiJ_T0036408.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57581168 57588606 - MGP_WSBEiJ_P0036408 Hnrnpk protein_coding protein_coding MGP_WSBEiJ_T0036409.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57581197 57583454 - Hnrnpk protein_coding retained_intron MGP_WSBEiJ_T0036410.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57581702 57589010 - MGP_WSBEiJ_P0036410 Hnrnpk protein_coding protein_coding MGP_WSBEiJ_T0036411.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57581772 57584525 - Hnrnpk protein_coding retained_intron MGP_WSBEiJ_T0036412.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57581777 57584525 - MGP_WSBEiJ_P0036412 Hnrnpk protein_coding protein_coding MGP_WSBEiJ_T0036413.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57582396 57588613 - Hnrnpk protein_coding retained_intron MGP_WSBEiJ_T0036414.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57583544 57588619 - MGP_WSBEiJ_P0036414 Hnrnpk protein_coding protein_coding MGP_WSBEiJ_T0036415.1 MGP_WSBEiJ_G0019958.1 mouse_genomes_project 13 57585233 57589005 - Hnrnpk protein_coding retained_intron MGP_WSBEiJ_T0036797.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83660438 83828866 + MGP_WSBEiJ_P0036797 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036798.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83660610 83829209 + MGP_WSBEiJ_P0036798 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036799.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83660644 83832603 + MGP_WSBEiJ_P0036799 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036800.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83660644 83757034 + MGP_WSBEiJ_P0036800 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036801.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83660644 83832603 + MGP_WSBEiJ_P0036801 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036802.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83660644 83757100 + MGP_WSBEiJ_P0036802 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036803.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83681882 83790208 + MGP_WSBEiJ_P0036803 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036804.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83682638 83797865 + MGP_WSBEiJ_P0036804 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036805.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83683129 83687683 + Mef2c protein_coding retained_intron MGP_WSBEiJ_T0036806.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83683186 83829983 + MGP_WSBEiJ_P0036806 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036807.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83683187 83790350 + MGP_WSBEiJ_P0036807 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036808.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83683193 83829216 + MGP_WSBEiJ_P0036808 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036809.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83683223 83818502 + MGP_WSBEiJ_P0036809 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036810.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83683252 83798615 + Mef2c protein_coding retained_intron MGP_WSBEiJ_T0036811.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83688471 83790199 + MGP_WSBEiJ_P0036811 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036812.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83732554 83800203 + MGP_WSBEiJ_P0036812 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036813.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83732587 83790387 + MGP_WSBEiJ_P0036813 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036814.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83733813 83832605 + MGP_WSBEiJ_P0036814 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036815.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83733824 83738623 + Mef2c protein_coding retained_intron MGP_WSBEiJ_T0036816.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83733828 83829995 + MGP_WSBEiJ_P0036816 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036817.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83733831 83797966 + MGP_WSBEiJ_P0036817 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036818.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83735351 83818455 + MGP_WSBEiJ_P0036818 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036819.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83735416 83797891 + MGP_WSBEiJ_P0036819 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036820.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83735883 83832605 + MGP_WSBEiJ_P0036820 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036821.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83735883 83828157 + MGP_WSBEiJ_P0036821 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036822.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83735883 83828157 + MGP_WSBEiJ_P0036822 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036823.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83790417 83828261 + MGP_WSBEiJ_P0036823 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0036824.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83797790 83821113 + MGP_WSBEiJ_P0036824 Mef2c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036825.1 MGP_WSBEiJ_G0020112.1 mouse_genomes_project 13 83818479 83828264 + MGP_WSBEiJ_P0036825 Mef2c protein_coding protein_coding MGP_WSBEiJ_T0037351.1 MGP_WSBEiJ_G0020282.1 mouse_genomes_project 13 120069716 120076934 - MGP_WSBEiJ_P0037351 Mrps30 protein_coding protein_coding MGP_WSBEiJ_T0035807.1 MGP_WSBEiJ_G0019754.1 mouse_genomes_project 13 29346138 29351968 + MGP_WSBEiJ_P0035807 Foxf2 protein_coding protein_coding MGP_WSBEiJ_T0000874.1 MGP_WSBEiJ_G0000812.1 mouse_genomes_project 13 117889219 117892141 + TEC TEC MGP_WSBEiJ_T0009758.1 MGP_WSBEiJ_G0007915.1 mouse_genomes_project 13 5462400 5462503 - Gm22750 miRNA miRNA MGP_WSBEiJ_T0036018.1 MGP_WSBEiJ_G0019836.1 mouse_genomes_project 13 44588565 44604143 - MGP_WSBEiJ_P0036018 Gm10113 protein_coding protein_coding MGP_WSBEiJ_T0036486.1 MGP_WSBEiJ_G0019984.1 mouse_genomes_project 13 60523160 60531441 - MGP_WSBEiJ_P0036486 Cts6 protein_coding protein_coding MGP_WSBEiJ_T0012637.1 MGP_WSBEiJ_G0010767.1 mouse_genomes_project 13 53735507 53735763 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009788.1 MGP_WSBEiJ_G0007945.1 mouse_genomes_project 13 59818106 59818282 - Gm25000 miRNA miRNA MGP_WSBEiJ_T0037121.1 MGP_WSBEiJ_G0020209.1 mouse_genomes_project 13 101589094 101625169 - MGP_WSBEiJ_P0037121 Cdk7 protein_coding protein_coding MGP_WSBEiJ_T0035654.1 MGP_WSBEiJ_G0019685.1 mouse_genomes_project 13 20992441 20992836 - MGP_WSBEiJ_P0035654 Hist1h4c protein_coding protein_coding MGP_WSBEiJ_T0035534.1 MGP_WSBEiJ_G0019605.1 mouse_genomes_project 13 17810217 18055995 + MGP_WSBEiJ_P0035534 Aoah protein_coding protein_coding MGP_WSBEiJ_T0035443.1 MGP_WSBEiJ_G0019570.1 mouse_genomes_project 13 8907083 8984934 - MGP_WSBEiJ_P0035443 Actn2 protein_coding protein_coding MGP_WSBEiJ_T0035444.1 MGP_WSBEiJ_G0019570.1 mouse_genomes_project 13 8907092 8984898 - MGP_WSBEiJ_P0035444 Actn2 protein_coding protein_coding MGP_WSBEiJ_T0035445.1 MGP_WSBEiJ_G0019570.1 mouse_genomes_project 13 8949003 8984906 - MGP_WSBEiJ_P0035445 Actn2 protein_coding protein_coding MGP_WSBEiJ_T0036061.1 MGP_WSBEiJ_G0019850.1 mouse_genomes_project 13 47049434 47050724 + MGP_WSBEiJ_P0036061 A830005F24Rik protein_coding protein_coding MGP_WSBEiJ_T0012650.1 MGP_WSBEiJ_G0010780.1 mouse_genomes_project 13 69077834 69078830 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037308.1 MGP_WSBEiJ_G0020260.1 mouse_genomes_project 13 114384881 114391244 + MGP_WSBEiJ_P0037308 Mcidas protein_coding protein_coding MGP_WSBEiJ_T0036542.1 MGP_WSBEiJ_G0020000.1 mouse_genomes_project 13 63724204 63807778 - MGP_WSBEiJ_P0036542 Cdc14b protein_coding unknown_likely_coding MGP_WSBEiJ_T0036543.1 MGP_WSBEiJ_G0020000.1 mouse_genomes_project 13 63724212 63808001 - MGP_WSBEiJ_P0036543 Cdc14b protein_coding protein_coding MGP_WSBEiJ_T0036544.1 MGP_WSBEiJ_G0020000.1 mouse_genomes_project 13 63724212 63780706 - MGP_WSBEiJ_P0036544 Cdc14b protein_coding protein_coding MGP_WSBEiJ_T0036545.1 MGP_WSBEiJ_G0020000.1 mouse_genomes_project 13 63727015 63807907 - MGP_WSBEiJ_P0036545 Cdc14b protein_coding protein_coding MGP_WSBEiJ_T0012593.1 MGP_WSBEiJ_G0010723.1 mouse_genomes_project 13 17719846 17720846 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035341.1 MGP_WSBEiJ_G0019544.1 mouse_genomes_project 13 632389 650380 - MGP_WSBEiJ_P0035341 Akr1c18 protein_coding protein_coding MGP_WSBEiJ_T0035342.1 MGP_WSBEiJ_G0019544.1 mouse_genomes_project 13 632389 650406 - MGP_WSBEiJ_P0035342 Akr1c18 protein_coding protein_coding MGP_WSBEiJ_T0037314.1 MGP_WSBEiJ_G0020262.1 mouse_genomes_project 13 114432187 114435130 - MGP_WSBEiJ_P0037314 Gm10735 protein_coding protein_coding MGP_WSBEiJ_T0035439.1 MGP_WSBEiJ_G0019568.1 mouse_genomes_project 13 8133876 8727722 - MGP_WSBEiJ_P0035439 Ryr2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035440.1 MGP_WSBEiJ_G0019568.1 mouse_genomes_project 13 8133886 8728221 - MGP_WSBEiJ_P0035440 Ryr2 protein_coding protein_coding MGP_WSBEiJ_T0035441.1 MGP_WSBEiJ_G0019568.1 mouse_genomes_project 13 8133886 8728221 - MGP_WSBEiJ_P0035441 Ryr2 protein_coding protein_coding MGP_WSBEiJ_T0035546.1 MGP_WSBEiJ_G0019611.1 mouse_genomes_project 13 18399334 18400389 + MGP_WSBEiJ_P0035546 Olfr1367 protein_coding protein_coding MGP_WSBEiJ_T0036499.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62799951 62929770 - MGP_WSBEiJ_P0036499 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036500.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62806769 62929749 - MGP_WSBEiJ_P0036500 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036501.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62806984 62812647 - Fancc protein_coding processed_transcript MGP_WSBEiJ_T0036502.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62806985 62929750 - MGP_WSBEiJ_P0036502 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036503.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62807365 62929719 - MGP_WSBEiJ_P0036503 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036504.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62807726 62820269 - Fancc protein_coding processed_transcript MGP_WSBEiJ_T0036505.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62811751 62929747 - Fancc protein_coding retained_intron MGP_WSBEiJ_T0036506.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62816549 62827113 - Fancc protein_coding processed_transcript MGP_WSBEiJ_T0036507.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62825787 62848140 - Fancc protein_coding processed_transcript MGP_WSBEiJ_T0036508.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62825787 62929770 - Fancc protein_coding retained_intron MGP_WSBEiJ_T0036509.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62835762 62896854 - MGP_WSBEiJ_P0036509 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036510.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62843337 62929282 - MGP_WSBEiJ_P0036510 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036511.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62843388 62904916 - MGP_WSBEiJ_P0036511 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036512.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62843397 62896981 - Fancc protein_coding retained_intron MGP_WSBEiJ_T0036513.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62843427 62991301 - MGP_WSBEiJ_P0036513 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036514.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62901629 62929708 - MGP_WSBEiJ_P0036514 Fancc protein_coding protein_coding MGP_WSBEiJ_T0036515.1 MGP_WSBEiJ_G0019993.1 mouse_genomes_project 13 62901686 62908381 - MGP_WSBEiJ_P0036515 Fancc protein_coding protein_coding MGP_WSBEiJ_T0035731.1 MGP_WSBEiJ_G0019715.1 mouse_genomes_project 13 22394249 22460572 + MGP_WSBEiJ_P0035731 Dcdc2a protein_coding protein_coding MGP_WSBEiJ_T0035732.1 MGP_WSBEiJ_G0019715.1 mouse_genomes_project 13 22394498 22566682 + MGP_WSBEiJ_P0035732 Dcdc2a protein_coding protein_coding MGP_WSBEiJ_T0035733.1 MGP_WSBEiJ_G0019715.1 mouse_genomes_project 13 22435570 22458451 + Dcdc2a protein_coding processed_transcript MGP_WSBEiJ_T0035734.1 MGP_WSBEiJ_G0019715.1 mouse_genomes_project 13 22530155 22548668 + Dcdc2a protein_coding processed_transcript MGP_WSBEiJ_T0035489.1 MGP_WSBEiJ_G0019589.1 mouse_genomes_project 13 11486675 11495784 + MGP_WSBEiJ_P0035489 AW209491 protein_coding protein_coding MGP_WSBEiJ_T0035490.1 MGP_WSBEiJ_G0019589.1 mouse_genomes_project 13 11486688 11495784 + MGP_WSBEiJ_P0035490 AW209491 protein_coding protein_coding MGP_WSBEiJ_T0009763.1 MGP_WSBEiJ_G0007920.1 mouse_genomes_project 13 18785924 18787289 + miRNA miRNA MGP_WSBEiJ_T0036236.1 MGP_WSBEiJ_G0019902.1 mouse_genomes_project 13 53593088 53629541 + MGP_WSBEiJ_P0036236 Cdhr2 protein_coding protein_coding MGP_WSBEiJ_T0037137.1 MGP_WSBEiJ_G0020214.1 mouse_genomes_project 13 102612564 102701822 - MGP_WSBEiJ_P0037137 Pik3r1 protein_coding protein_coding MGP_WSBEiJ_T0037138.1 MGP_WSBEiJ_G0020214.1 mouse_genomes_project 13 102615668 102625460 - MGP_WSBEiJ_P0037138 Pik3r1 protein_coding protein_coding MGP_WSBEiJ_T0037139.1 MGP_WSBEiJ_G0020214.1 mouse_genomes_project 13 102619567 102625406 - MGP_WSBEiJ_P0037139 Pik3r1 protein_coding protein_coding MGP_WSBEiJ_T0037140.1 MGP_WSBEiJ_G0020214.1 mouse_genomes_project 13 102621025 102627433 - MGP_WSBEiJ_P0037140 Pik3r1 protein_coding protein_coding MGP_WSBEiJ_T0037141.1 MGP_WSBEiJ_G0020214.1 mouse_genomes_project 13 102622963 102625173 - Pik3r1 protein_coding retained_intron MGP_WSBEiJ_T0037142.1 MGP_WSBEiJ_G0020214.1 mouse_genomes_project 13 102634310 102634966 - Pik3r1 protein_coding retained_intron MGP_WSBEiJ_T0037143.1 MGP_WSBEiJ_G0020214.1 mouse_genomes_project 13 102689078 102701818 - Pik3r1 protein_coding retained_intron MGP_WSBEiJ_T0036996.1 MGP_WSBEiJ_G0020162.1 mouse_genomes_project 13 96103435 96116564 - MGP_WSBEiJ_P0036996 F2rl1 protein_coding protein_coding MGP_WSBEiJ_T0003417.1 MGP_WSBEiJ_G0003123.1 mouse_genomes_project 13 92311389 92312002 + 1700119I11Rik antisense antisense MGP_WSBEiJ_T0003418.1 MGP_WSBEiJ_G0003123.1 mouse_genomes_project 13 92311442 92311996 + 1700119I11Rik antisense antisense MGP_WSBEiJ_T0036466.1 MGP_WSBEiJ_G0019969.1 mouse_genomes_project 13 59000245 59004325 - MGP_WSBEiJ_P0036466 1700014D04Rik protein_coding protein_coding MGP_WSBEiJ_T0036467.1 MGP_WSBEiJ_G0019969.1 mouse_genomes_project 13 59001359 59002154 - MGP_WSBEiJ_P0036467 1700014D04Rik protein_coding protein_coding MGP_WSBEiJ_T0036468.1 MGP_WSBEiJ_G0019969.1 mouse_genomes_project 13 59003110 59006161 - MGP_WSBEiJ_P0036468 1700014D04Rik protein_coding protein_coding MGP_WSBEiJ_T0006540.1 MGP_WSBEiJ_G0005417.1 mouse_genomes_project 13 113185460 113186970 + Gm15324 lincRNA lincRNA MGP_WSBEiJ_T0003393.1 MGP_WSBEiJ_G0003112.1 mouse_genomes_project 13 63780876 63801541 + 1810034E14Rik antisense antisense MGP_WSBEiJ_T0003394.1 MGP_WSBEiJ_G0003112.1 mouse_genomes_project 13 63780948 63799894 + 1810034E14Rik antisense antisense MGP_WSBEiJ_T0003395.1 MGP_WSBEiJ_G0003112.1 mouse_genomes_project 13 63799896 63801541 + 1810034E14Rik antisense antisense MGP_WSBEiJ_T0097820.1 MGP_WSBEiJ_G0036483.1 mouse_genomes_project 13 90304059 90304161 - Gm24498 snRNA snRNA MGP_WSBEiJ_T0035664.1 MGP_WSBEiJ_G0019693.1 mouse_genomes_project 13 21057396 21057935 - MGP_WSBEiJ_P0035664 Hist1h4a protein_coding protein_coding MGP_WSBEiJ_T0016773.1 MGP_WSBEiJ_G0014680.1 mouse_genomes_project 13 121195443 121198401 - Gm9752 processed_transcript processed_transcript MGP_WSBEiJ_T0035645.1 MGP_WSBEiJ_G0019678.1 mouse_genomes_project 13 20839866 20841418 - MGP_WSBEiJ_P0035645 Hist1h3e protein_coding protein_coding MGP_WSBEiJ_T0036173.1 MGP_WSBEiJ_G0019885.1 mouse_genomes_project 13 51895656 52088413 - MGP_WSBEiJ_P0036173 Ror2 protein_coding protein_coding MGP_WSBEiJ_T0036174.1 MGP_WSBEiJ_G0019885.1 mouse_genomes_project 13 51895661 52088988 - MGP_WSBEiJ_P0036174 Ror2 protein_coding protein_coding MGP_WSBEiJ_T0036175.1 MGP_WSBEiJ_G0019885.1 mouse_genomes_project 13 51923788 52077451 - Ror2 protein_coding processed_transcript MGP_WSBEiJ_T0003376.1 MGP_WSBEiJ_G0003100.1 mouse_genomes_project 13 38868788 38876188 + Gm26688 antisense antisense MGP_WSBEiJ_T0035364.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3143716 3153101 - Pfkp protein_coding retained_intron MGP_WSBEiJ_T0035365.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3143716 3207083 - MGP_WSBEiJ_P0035365 Pfkp protein_coding protein_coding MGP_WSBEiJ_T0035366.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3145275 3207031 - MGP_WSBEiJ_P0035366 Pfkp protein_coding protein_coding MGP_WSBEiJ_T0035367.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3145561 3151210 - MGP_WSBEiJ_P0035367 Pfkp protein_coding protein_coding MGP_WSBEiJ_T0035368.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3146568 3162014 - MGP_WSBEiJ_P0035368 Pfkp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035369.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3146568 3162897 - MGP_WSBEiJ_P0035369 Pfkp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035370.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3150002 3152761 - Pfkp protein_coding retained_intron MGP_WSBEiJ_T0035371.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3157107 3207031 - Pfkp protein_coding retained_intron MGP_WSBEiJ_T0035372.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3162429 3167016 - Pfkp protein_coding retained_intron MGP_WSBEiJ_T0035373.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3166605 3207031 - Pfkp protein_coding retained_intron MGP_WSBEiJ_T0035374.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3172852 3180387 - Pfkp protein_coding retained_intron MGP_WSBEiJ_T0035375.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3177395 3207031 - Pfkp protein_coding retained_intron MGP_WSBEiJ_T0035376.1 MGP_WSBEiJ_G0019556.1 mouse_genomes_project 13 3179224 3194913 - MGP_WSBEiJ_P0035376 Pfkp protein_coding protein_coding MGP_WSBEiJ_T0035614.1 MGP_WSBEiJ_G0019653.1 mouse_genomes_project 13 19475323 19476220 + MGP_WSBEiJ_P0035614 Vmn1r197 protein_coding protein_coding MGP_WSBEiJ_T0006516.1 MGP_WSBEiJ_G0005398.1 mouse_genomes_project 13 94458061 94460087 - Gm26527 lincRNA lincRNA MGP_WSBEiJ_T0037327.1 MGP_WSBEiJ_G0020271.1 mouse_genomes_project 13 115735500 115841124 - MGP_WSBEiJ_P0037327 Ndufs4 protein_coding protein_coding MGP_WSBEiJ_T0036598.1 MGP_WSBEiJ_G0020030.1 mouse_genomes_project 13 66826133 66841974 - MGP_WSBEiJ_P0036598 Zfp458 protein_coding protein_coding MGP_WSBEiJ_T0035609.1 MGP_WSBEiJ_G0019648.1 mouse_genomes_project 13 19323423 19324326 - MGP_WSBEiJ_P0035609 Vmn1r192 protein_coding protein_coding MGP_WSBEiJ_T0036549.1 MGP_WSBEiJ_G0020004.1 mouse_genomes_project 13 64031791 64053306 - MGP_WSBEiJ_P0036549 1190003K10Rik protein_coding protein_coding MGP_WSBEiJ_T0036176.1 MGP_WSBEiJ_G0019886.1 mouse_genomes_project 13 52145110 52191731 - MGP_WSBEiJ_P0036176 Sptlc1 protein_coding protein_coding MGP_WSBEiJ_T0006455.1 MGP_WSBEiJ_G0005358.1 mouse_genomes_project 13 37039451 37045132 + 5033403F01Rik lincRNA lincRNA MGP_WSBEiJ_T0035817.1 MGP_WSBEiJ_G0019758.1 mouse_genomes_project 13 30592078 30612498 + MGP_WSBEiJ_P0035817 Wrnip1 protein_coding protein_coding MGP_WSBEiJ_T0036764.1 MGP_WSBEiJ_G0020105.1 mouse_genomes_project 13 78166390 78177876 - MGP_WSBEiJ_P0036764 Nr2f1 protein_coding protein_coding MGP_WSBEiJ_T0036765.1 MGP_WSBEiJ_G0020105.1 mouse_genomes_project 13 78166569 78174453 - MGP_WSBEiJ_P0036765 Nr2f1 protein_coding protein_coding MGP_WSBEiJ_T0036766.1 MGP_WSBEiJ_G0020105.1 mouse_genomes_project 13 78167081 78175348 - MGP_WSBEiJ_P0036766 Nr2f1 protein_coding protein_coding MGP_WSBEiJ_T0036767.1 MGP_WSBEiJ_G0020105.1 mouse_genomes_project 13 78167142 78173782 - MGP_WSBEiJ_P0036767 Nr2f1 protein_coding protein_coding MGP_WSBEiJ_T0036768.1 MGP_WSBEiJ_G0020105.1 mouse_genomes_project 13 78167281 78167853 - Nr2f1 protein_coding processed_transcript MGP_WSBEiJ_T0036184.1 MGP_WSBEiJ_G0019893.1 mouse_genomes_project 13 53331908 53341914 - MGP_WSBEiJ_P0036184 Thoc3 protein_coding protein_coding MGP_WSBEiJ_T0036185.1 MGP_WSBEiJ_G0019893.1 mouse_genomes_project 13 53336751 53341853 - Thoc3 protein_coding processed_transcript MGP_WSBEiJ_T0036186.1 MGP_WSBEiJ_G0019893.1 mouse_genomes_project 13 53340872 53341891 - Thoc3 protein_coding retained_intron MGP_WSBEiJ_T0100565.1 MGP_WSBEiJ_G0039023.1 mouse_genomes_project 13 41111133 41112022 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036154.1 MGP_WSBEiJ_G0019882.1 mouse_genomes_project 13 51348268 51414347 + MGP_WSBEiJ_P0036154 Syk protein_coding protein_coding MGP_WSBEiJ_T0036155.1 MGP_WSBEiJ_G0019882.1 mouse_genomes_project 13 51348532 51409160 + MGP_WSBEiJ_P0036155 Syk protein_coding protein_coding MGP_WSBEiJ_T0036156.1 MGP_WSBEiJ_G0019882.1 mouse_genomes_project 13 51348598 51379451 + Syk protein_coding retained_intron MGP_WSBEiJ_T0036157.1 MGP_WSBEiJ_G0019882.1 mouse_genomes_project 13 51361891 51414337 + MGP_WSBEiJ_P0036157 Syk protein_coding protein_coding MGP_WSBEiJ_T0036158.1 MGP_WSBEiJ_G0019882.1 mouse_genomes_project 13 51361997 51390048 + Syk protein_coding retained_intron MGP_WSBEiJ_T0012611.1 MGP_WSBEiJ_G0010741.1 mouse_genomes_project 13 22470288 22470606 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100557.1 MGP_WSBEiJ_G0039015.1 mouse_genomes_project 13 31466310 31473434 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0037127.1 MGP_WSBEiJ_G0020211.1 mouse_genomes_project 13 101658342 101677528 - MGP_WSBEiJ_P0037127 Cenph protein_coding protein_coding MGP_WSBEiJ_T0037128.1 MGP_WSBEiJ_G0020211.1 mouse_genomes_project 13 101673829 101677412 - Cenph protein_coding retained_intron MGP_WSBEiJ_T0036295.1 MGP_WSBEiJ_G0019916.1 mouse_genomes_project 13 54270643 54275371 - MGP_WSBEiJ_P0036295 Mxd3 protein_coding protein_coding MGP_WSBEiJ_T0036296.1 MGP_WSBEiJ_G0019916.1 mouse_genomes_project 13 54271154 54275346 - Mxd3 protein_coding retained_intron MGP_WSBEiJ_T0036297.1 MGP_WSBEiJ_G0019916.1 mouse_genomes_project 13 54271384 54274965 - Mxd3 protein_coding processed_transcript MGP_WSBEiJ_T0097798.1 MGP_WSBEiJ_G0036461.1 mouse_genomes_project 13 18546163 18546227 - Gm23779 snRNA snRNA MGP_WSBEiJ_T0016751.1 MGP_WSBEiJ_G0014668.1 mouse_genomes_project 13 22287705 22291716 + 9330162012Rik processed_transcript processed_transcript MGP_WSBEiJ_T0036659.1 MGP_WSBEiJ_G0020061.1 mouse_genomes_project 13 71817281 71824312 - MGP_WSBEiJ_P0036659 Irx1 protein_coding protein_coding MGP_WSBEiJ_T0037090.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100910103 100922941 + MGP_WSBEiJ_P0037090 Smn1 protein_coding protein_coding MGP_WSBEiJ_T0037091.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100910109 100912394 + Smn1 protein_coding retained_intron MGP_WSBEiJ_T0037092.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100910109 100913091 + MGP_WSBEiJ_P0037092 Smn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037093.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100910145 100922731 + MGP_WSBEiJ_P0037093 Smn1 protein_coding protein_coding MGP_WSBEiJ_T0037094.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100910175 100916426 + MGP_WSBEiJ_P0037094 Smn1 protein_coding protein_coding MGP_WSBEiJ_T0037095.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100911376 100912187 + Smn1 protein_coding retained_intron MGP_WSBEiJ_T0037096.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100913153 100913909 + Smn1 protein_coding retained_intron MGP_WSBEiJ_T0037097.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100916254 100922941 + Smn1 protein_coding retained_intron MGP_WSBEiJ_T0037098.1 MGP_WSBEiJ_G0020200.1 mouse_genomes_project 13 100920644 100922701 + Smn1 protein_coding retained_intron MGP_WSBEiJ_T0012645.1 MGP_WSBEiJ_G0010775.1 mouse_genomes_project 13 66459800 66460158 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100345.1 MGP_WSBEiJ_G0038828.1 mouse_genomes_project 13 113037675 113040530 - unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0006520.1 MGP_WSBEiJ_G0005402.1 mouse_genomes_project 13 98096799 98163584 + Lncenc1 lincRNA lincRNA MGP_WSBEiJ_T0006521.1 MGP_WSBEiJ_G0005402.1 mouse_genomes_project 13 98147951 98163584 + Lncenc1 lincRNA lincRNA MGP_WSBEiJ_T0006522.1 MGP_WSBEiJ_G0005402.1 mouse_genomes_project 13 98148205 98154954 + Lncenc1 lincRNA lincRNA MGP_WSBEiJ_T0037044.1 MGP_WSBEiJ_G0020178.1 mouse_genomes_project 13 97814214 97836112 - MGP_WSBEiJ_P0037044 Hexb protein_coding protein_coding MGP_WSBEiJ_T0036416.1 MGP_WSBEiJ_G0019959.1 mouse_genomes_project 13 57589099 57599502 + MGP_WSBEiJ_P0036416 Rmi1 protein_coding protein_coding MGP_WSBEiJ_T0099034.1 MGP_WSBEiJ_G0037697.1 mouse_genomes_project 13 1708834 1708966 - Gm24790 snoRNA snoRNA MGP_WSBEiJ_T0036364.1 MGP_WSBEiJ_G0019942.1 mouse_genomes_project 13 55377827 55380707 + MGP_WSBEiJ_P0036364 Gm10782 protein_coding protein_coding MGP_WSBEiJ_T0000862.1 MGP_WSBEiJ_G0000800.1 mouse_genomes_project 13 90780823 90781718 - TEC TEC MGP_WSBEiJ_T0035615.1 MGP_WSBEiJ_G0019654.1 mouse_genomes_project 13 19504970 19505873 + MGP_WSBEiJ_P0035615 Vmn1r198 protein_coding protein_coding MGP_WSBEiJ_T0012663.1 MGP_WSBEiJ_G0010793.1 mouse_genomes_project 13 84530323 84531288 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009784.1 MGP_WSBEiJ_G0007941.1 mouse_genomes_project 13 57146726 57146802 - Mir874 miRNA miRNA MGP_WSBEiJ_T0100558.1 MGP_WSBEiJ_G0039016.1 mouse_genomes_project 13 31557179 31557338 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006457.1 MGP_WSBEiJ_G0005360.1 mouse_genomes_project 13 40250132 40251057 + Gm28707 lincRNA lincRNA MGP_WSBEiJ_T0036423.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58693897 58694633 - Agtpbp1 protein_coding processed_transcript MGP_WSBEiJ_T0036424.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58693898 58805493 - MGP_WSBEiJ_P0036424 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036425.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58693900 58780779 - MGP_WSBEiJ_P0036425 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036426.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58694240 58805126 - MGP_WSBEiJ_P0036426 Agtpbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036427.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58694240 58805490 - MGP_WSBEiJ_P0036427 Agtpbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036428.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58698227 58792647 - MGP_WSBEiJ_P0036428 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036429.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58718089 58725529 - Agtpbp1 protein_coding processed_transcript MGP_WSBEiJ_T0036430.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58724771 58805499 - MGP_WSBEiJ_P0036430 Agtpbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036431.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58738641 58805490 - MGP_WSBEiJ_P0036431 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036432.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58738651 58805498 - MGP_WSBEiJ_P0036432 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036433.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58757531 58761317 - Agtpbp1 protein_coding processed_transcript MGP_WSBEiJ_T0036434.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58758557 58805515 - MGP_WSBEiJ_P0036434 Agtpbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036435.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58761328 58781661 - Agtpbp1 protein_coding processed_transcript MGP_WSBEiJ_T0036436.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58764844 58805493 - MGP_WSBEiJ_P0036436 Agtpbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036437.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58776060 58805483 - MGP_WSBEiJ_P0036437 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036438.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58778773 58805551 - MGP_WSBEiJ_P0036438 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036439.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58779495 58805504 - MGP_WSBEiJ_P0036439 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036440.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58779495 58806980 - MGP_WSBEiJ_P0036440 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036441.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58779503 58805123 - MGP_WSBEiJ_P0036441 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036442.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58779633 58834747 - MGP_WSBEiJ_P0036442 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036443.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58783840 58805241 - MGP_WSBEiJ_P0036443 Agtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0036444.1 MGP_WSBEiJ_G0019962.1 mouse_genomes_project 13 58829733 58834763 - Agtpbp1 protein_coding processed_transcript MGP_WSBEiJ_T0035770.1 MGP_WSBEiJ_G0019736.1 mouse_genomes_project 13 25276968 25284027 + MGP_WSBEiJ_P0035770 Prl2a1 protein_coding protein_coding MGP_WSBEiJ_T0003378.1 MGP_WSBEiJ_G0003102.1 mouse_genomes_project 13 40029834 40036598 + Gm28564 antisense antisense MGP_WSBEiJ_T0002542.1 MGP_WSBEiJ_G0002449.1 mouse_genomes_project 13 16112158 16112626 + MGP_WSBEiJ_P0002542 Tcrg-V7 TR_V_gene TR_V_gene MGP_WSBEiJ_T0036346.1 MGP_WSBEiJ_G0019934.1 mouse_genomes_project 13 54698486 54710050 + MGP_WSBEiJ_P0036346 Txndc15 protein_coding protein_coding MGP_WSBEiJ_T0006517.1 MGP_WSBEiJ_G0005399.1 mouse_genomes_project 13 94656060 94658731 - Gm15907 lincRNA lincRNA MGP_WSBEiJ_T0099037.1 MGP_WSBEiJ_G0037700.1 mouse_genomes_project 13 9260350 9260586 + Gm25483 snoRNA snoRNA MGP_WSBEiJ_T0097807.1 MGP_WSBEiJ_G0036470.1 mouse_genomes_project 13 39751150 39751316 - Gm24819 snRNA snRNA MGP_WSBEiJ_T0036547.1 MGP_WSBEiJ_G0020002.1 mouse_genomes_project 13 63899952 63907705 - MGP_WSBEiJ_P0036547 Ctsl protein_coding protein_coding MGP_WSBEiJ_T0035359.1 MGP_WSBEiJ_G0019552.1 mouse_genomes_project 13 1303928 1372999 + MGP_WSBEiJ_P0035359 Gm5444 protein_coding protein_coding MGP_WSBEiJ_T0006491.1 MGP_WSBEiJ_G0005381.1 mouse_genomes_project 13 62781716 62792379 - Gm16907 lincRNA lincRNA MGP_WSBEiJ_T0035932.1 MGP_WSBEiJ_G0019804.1 mouse_genomes_project 13 38842311 38847025 + MGP_WSBEiJ_P0035932 Gm9979 protein_coding protein_coding MGP_WSBEiJ_T0035944.1 MGP_WSBEiJ_G0019809.1 mouse_genomes_project 13 39176606 39226394 - MGP_WSBEiJ_P0035944 Mak protein_coding unknown_likely_coding MGP_WSBEiJ_T0035945.1 MGP_WSBEiJ_G0019809.1 mouse_genomes_project 13 39176722 39226376 - MGP_WSBEiJ_P0035945 Mak protein_coding protein_coding MGP_WSBEiJ_T0035946.1 MGP_WSBEiJ_G0019809.1 mouse_genomes_project 13 39176722 39217728 - MGP_WSBEiJ_P0035946 Mak protein_coding protein_coding MGP_WSBEiJ_T0035947.1 MGP_WSBEiJ_G0019809.1 mouse_genomes_project 13 39176722 39226376 - MGP_WSBEiJ_P0035947 Mak protein_coding protein_coding MGP_WSBEiJ_T0036477.1 MGP_WSBEiJ_G0019977.1 mouse_genomes_project 13 60150302 60170618 - MGP_WSBEiJ_P0036477 4930486L24Rik protein_coding protein_coding MGP_WSBEiJ_T0036024.1 MGP_WSBEiJ_G0019840.1 mouse_genomes_project 13 45086931 45096210 + MGP_WSBEiJ_P0036024 Fam8a1 protein_coding protein_coding MGP_WSBEiJ_T0036025.1 MGP_WSBEiJ_G0019840.1 mouse_genomes_project 13 45088635 45091264 + Fam8a1 protein_coding retained_intron MGP_WSBEiJ_T0006545.1 MGP_WSBEiJ_G0005421.1 mouse_genomes_project 13 116076420 116129329 + 4930544M13Rik lincRNA lincRNA MGP_WSBEiJ_T0006546.1 MGP_WSBEiJ_G0005421.1 mouse_genomes_project 13 116076420 116170923 + 4930544M13Rik lincRNA lincRNA MGP_WSBEiJ_T0003385.1 MGP_WSBEiJ_G0003109.1 mouse_genomes_project 13 54761254 54765916 - antisense antisense MGP_WSBEiJ_T0003386.1 MGP_WSBEiJ_G0003109.1 mouse_genomes_project 13 54762058 54765901 - antisense antisense MGP_WSBEiJ_T0003387.1 MGP_WSBEiJ_G0003109.1 mouse_genomes_project 13 54762065 54765927 - antisense antisense MGP_WSBEiJ_T0097810.1 MGP_WSBEiJ_G0036473.1 mouse_genomes_project 13 42153841 42153949 + Gm23117 snRNA snRNA MGP_WSBEiJ_T0035502.1 MGP_WSBEiJ_G0019595.1 mouse_genomes_project 13 15031149 15420922 - MGP_WSBEiJ_P0035502 Pou6f2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035503.1 MGP_WSBEiJ_G0019595.1 mouse_genomes_project 13 15031157 15296905 - MGP_WSBEiJ_P0035503 Pou6f2 protein_coding protein_coding MGP_WSBEiJ_T0035504.1 MGP_WSBEiJ_G0019595.1 mouse_genomes_project 13 15035179 15296905 - MGP_WSBEiJ_P0035504 Pou6f2 protein_coding protein_coding MGP_WSBEiJ_T0035505.1 MGP_WSBEiJ_G0019595.1 mouse_genomes_project 13 15035210 15085972 - MGP_WSBEiJ_P0035505 Pou6f2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035506.1 MGP_WSBEiJ_G0019595.1 mouse_genomes_project 13 15051645 15100876 - Pou6f2 protein_coding processed_transcript MGP_WSBEiJ_T0035507.1 MGP_WSBEiJ_G0019595.1 mouse_genomes_project 13 15051645 15085977 - MGP_WSBEiJ_P0035507 Pou6f2 protein_coding protein_coding MGP_WSBEiJ_T0035508.1 MGP_WSBEiJ_G0019595.1 mouse_genomes_project 13 15061765 15296905 - Pou6f2 protein_coding processed_transcript MGP_WSBEiJ_T0037307.1 MGP_WSBEiJ_G0020259.1 mouse_genomes_project 13 114377167 114380137 + MGP_WSBEiJ_P0037307 Ccno protein_coding protein_coding MGP_WSBEiJ_T0037077.1 MGP_WSBEiJ_G0020197.1 mouse_genomes_project 13 100731877 100802846 - MGP_WSBEiJ_P0037077 Mccc2 protein_coding protein_coding MGP_WSBEiJ_T0012656.1 MGP_WSBEiJ_G0010786.1 mouse_genomes_project 13 74302181 74302520 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035867.1 MGP_WSBEiJ_G0019777.1 mouse_genomes_project 13 32549862 32574614 - MGP_WSBEiJ_P0035867 Pxdc1 protein_coding protein_coding MGP_WSBEiJ_T0035868.1 MGP_WSBEiJ_G0019777.1 mouse_genomes_project 13 32549862 32574624 - MGP_WSBEiJ_P0035868 Pxdc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035869.1 MGP_WSBEiJ_G0019777.1 mouse_genomes_project 13 32549863 32574624 - MGP_WSBEiJ_P0035869 Pxdc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035870.1 MGP_WSBEiJ_G0019777.1 mouse_genomes_project 13 32550899 32570522 - MGP_WSBEiJ_P0035870 Pxdc1 protein_coding protein_coding MGP_WSBEiJ_T0036470.1 MGP_WSBEiJ_G0019971.1 mouse_genomes_project 13 59033500 59085340 - MGP_WSBEiJ_P0036470 Zcchc6 protein_coding protein_coding MGP_WSBEiJ_T0035362.1 MGP_WSBEiJ_G0019555.1 mouse_genomes_project 13 3111505 3144088 + MGP_WSBEiJ_P0035362 Pitrm1 protein_coding protein_coding MGP_WSBEiJ_T0035363.1 MGP_WSBEiJ_G0019555.1 mouse_genomes_project 13 3111522 3144354 + MGP_WSBEiJ_P0035363 Pitrm1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0016747.1 MGP_WSBEiJ_G0014664.1 mouse_genomes_project 13 19149105 19154243 + Gm11292 processed_transcript processed_transcript MGP_WSBEiJ_T0006543.1 MGP_WSBEiJ_G0005419.1 mouse_genomes_project 13 113326608 113330543 + Gm15322 lincRNA lincRNA MGP_WSBEiJ_T0035591.1 MGP_WSBEiJ_G0019639.1 mouse_genomes_project 13 18860054 18916226 + MGP_WSBEiJ_P0035591 Hist1h2br protein_coding protein_coding MGP_WSBEiJ_T0037285.1 MGP_WSBEiJ_G0020251.1 mouse_genomes_project 13 113638823 113737809 + MGP_WSBEiJ_P0037285 Ankrd55 protein_coding protein_coding MGP_WSBEiJ_T0037286.1 MGP_WSBEiJ_G0020251.1 mouse_genomes_project 13 113638823 113737809 + MGP_WSBEiJ_P0037286 Ankrd55 protein_coding protein_coding MGP_WSBEiJ_T0037287.1 MGP_WSBEiJ_G0020251.1 mouse_genomes_project 13 113638823 113697059 + MGP_WSBEiJ_P0037287 Ankrd55 protein_coding protein_coding MGP_WSBEiJ_T0037288.1 MGP_WSBEiJ_G0020251.1 mouse_genomes_project 13 113638890 113709415 + MGP_WSBEiJ_P0037288 Ankrd55 protein_coding protein_coding MGP_WSBEiJ_T0037074.1 MGP_WSBEiJ_G0020194.1 mouse_genomes_project 13 100112789 100186119 + MGP_WSBEiJ_P0037074 Mrps27 protein_coding protein_coding MGP_WSBEiJ_T0036732.1 MGP_WSBEiJ_G0020092.1 mouse_genomes_project 13 75709235 75774140 + MGP_WSBEiJ_P0036732 Ell2 protein_coding protein_coding MGP_WSBEiJ_T0036963.1 MGP_WSBEiJ_G0020151.1 mouse_genomes_project 13 94727475 94804634 - MGP_WSBEiJ_P0036963 Scamp1 protein_coding protein_coding MGP_WSBEiJ_T0036964.1 MGP_WSBEiJ_G0020151.1 mouse_genomes_project 13 94741991 94783020 - MGP_WSBEiJ_P0036964 Scamp1 protein_coding protein_coding MGP_WSBEiJ_T0099051.1 MGP_WSBEiJ_G0037714.1 mouse_genomes_project 13 48311123 48311245 + Gm23482 snoRNA snoRNA MGP_WSBEiJ_T0009781.1 MGP_WSBEiJ_G0007938.1 mouse_genomes_project 13 54408961 54409027 + Mir6943 miRNA miRNA MGP_WSBEiJ_T0003414.1 MGP_WSBEiJ_G0003122.1 mouse_genomes_project 13 92162764 92196323 - 4833422C13Rik antisense antisense MGP_WSBEiJ_T0003415.1 MGP_WSBEiJ_G0003122.1 mouse_genomes_project 13 92169004 92196227 - 4833422C13Rik antisense antisense MGP_WSBEiJ_T0003416.1 MGP_WSBEiJ_G0003122.1 mouse_genomes_project 13 92174417 92196279 - 4833422C13Rik antisense antisense MGP_WSBEiJ_T0036651.1 MGP_WSBEiJ_G0020056.1 mouse_genomes_project 13 69469154 69508067 - MGP_WSBEiJ_P0036651 protein_coding protein_coding MGP_WSBEiJ_T0099058.1 MGP_WSBEiJ_G0037721.1 mouse_genomes_project 13 75695396 75695479 + Gm23012 snoRNA snoRNA MGP_WSBEiJ_T0035501.1 MGP_WSBEiJ_G0019594.1 mouse_genomes_project 13 14791398 14847014 - MGP_WSBEiJ_P0035501 Rala protein_coding protein_coding MGP_WSBEiJ_T0036558.1 MGP_WSBEiJ_G0020010.1 mouse_genomes_project 13 64661726 64662674 + MGP_WSBEiJ_P0036558 Olfr465-ps1 protein_coding protein_coding MGP_WSBEiJ_T0037381.1 MGP_WSBEiJ_G0020296.1 mouse_genomes_project 13 121586169 121586951 - MGP_WSBEiJ_P0037381 protein_coding protein_coding MGP_WSBEiJ_T0006436.1 MGP_WSBEiJ_G0005344.1 mouse_genomes_project 13 29039750 29040926 - Gm11373 lincRNA lincRNA MGP_WSBEiJ_T0006468.1 MGP_WSBEiJ_G0005367.1 mouse_genomes_project 13 46782296 46783778 - A330048O09Rik lincRNA lincRNA MGP_WSBEiJ_T0009813.1 MGP_WSBEiJ_G0007970.1 mouse_genomes_project 13 120960630 120960749 - Gm44488 miRNA miRNA MGP_WSBEiJ_T0100563.1 MGP_WSBEiJ_G0039021.1 mouse_genomes_project 13 31693818 31696362 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035619.1 MGP_WSBEiJ_G0019658.1 mouse_genomes_project 13 19614227 19615130 + MGP_WSBEiJ_P0035619 Vmn1r201 protein_coding protein_coding MGP_WSBEiJ_T0003379.1 MGP_WSBEiJ_G0003103.1 mouse_genomes_project 13 41018232 41025668 - Gm15810 antisense antisense MGP_WSBEiJ_T0036670.1 MGP_WSBEiJ_G0020066.1 mouse_genomes_project 13 73241200 73242367 + MGP_WSBEiJ_P0036670 Mrpl36 protein_coding protein_coding MGP_WSBEiJ_T0037029.1 MGP_WSBEiJ_G0020175.1 mouse_genomes_project 13 97696866 97761624 + MGP_WSBEiJ_P0037029 Fam169a protein_coding protein_coding MGP_WSBEiJ_T0037030.1 MGP_WSBEiJ_G0020175.1 mouse_genomes_project 13 97701221 97761624 + MGP_WSBEiJ_P0037030 Fam169a protein_coding protein_coding MGP_WSBEiJ_T0035624.1 MGP_WSBEiJ_G0019663.1 mouse_genomes_project 13 20028563 20029553 - MGP_WSBEiJ_P0035624 Vmn1r211 protein_coding protein_coding MGP_WSBEiJ_T0012643.1 MGP_WSBEiJ_G0010773.1 mouse_genomes_project 13 64062421 64063797 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003419.1 MGP_WSBEiJ_G0003124.1 mouse_genomes_project 13 92866956 92879139 - C030017D09Rik antisense antisense MGP_WSBEiJ_T0035612.1 MGP_WSBEiJ_G0019651.1 mouse_genomes_project 13 19424478 19425429 + MGP_WSBEiJ_P0035612 Vmn1r195 protein_coding protein_coding MGP_WSBEiJ_T0000863.1 MGP_WSBEiJ_G0000801.1 mouse_genomes_project 13 91029269 91029682 + TEC TEC MGP_WSBEiJ_T0006481.1 MGP_WSBEiJ_G0005373.1 mouse_genomes_project 13 53271098 53271341 - Gm16248 lincRNA lincRNA MGP_WSBEiJ_T0036924.1 MGP_WSBEiJ_G0020136.1 mouse_genomes_project 13 92904652 92940278 - MGP_WSBEiJ_P0036924 Fam151b protein_coding protein_coding MGP_WSBEiJ_T0100561.1 MGP_WSBEiJ_G0039019.1 mouse_genomes_project 13 31600169 31603208 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036334.1 MGP_WSBEiJ_G0019929.1 mouse_genomes_project 13 54553792 54558322 + MGP_WSBEiJ_P0036334 Tmed9 protein_coding protein_coding MGP_WSBEiJ_T0012613.1 MGP_WSBEiJ_G0010743.1 mouse_genomes_project 13 22937040 22939342 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037374.1 MGP_WSBEiJ_G0020291.1 mouse_genomes_project 13 121364050 121369683 - MGP_WSBEiJ_P0037374 protein_coding protein_coding MGP_WSBEiJ_T0003357.1 MGP_WSBEiJ_G0003085.1 mouse_genomes_project 13 6955674 7274564 + antisense antisense MGP_WSBEiJ_T0036131.1 MGP_WSBEiJ_G0019876.1 mouse_genomes_project 13 50340552 50345968 + MGP_WSBEiJ_P0036131 Cks2 protein_coding protein_coding MGP_WSBEiJ_T0035719.1 MGP_WSBEiJ_G0019710.1 mouse_genomes_project 13 22171570 22183586 + MGP_WSBEiJ_P0035719 Tdp2 protein_coding protein_coding MGP_WSBEiJ_T0035720.1 MGP_WSBEiJ_G0019710.1 mouse_genomes_project 13 22171713 22178867 + Tdp2 protein_coding processed_transcript MGP_WSBEiJ_T0012602.1 MGP_WSBEiJ_G0010732.1 mouse_genomes_project 13 19901028 19901460 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016760.1 MGP_WSBEiJ_G0014671.1 mouse_genomes_project 13 33105292 33107775 + 1700011B04Rik processed_transcript retained_intron MGP_WSBEiJ_T0016761.1 MGP_WSBEiJ_G0014671.1 mouse_genomes_project 13 33106648 33113677 + 1700011B04Rik processed_transcript lincRNA MGP_WSBEiJ_T0012675.1 MGP_WSBEiJ_G0010805.1 mouse_genomes_project 13 105953339 105953747 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100010.1 MGP_WSBEiJ_G0038649.1 mouse_genomes_project 13 31949102 31953168 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100011.1 MGP_WSBEiJ_G0038649.1 mouse_genomes_project 13 31950483 31951040 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0035585.1 MGP_WSBEiJ_G0019633.1 mouse_genomes_project 13 18821275 18821540 - MGP_WSBEiJ_P0035585 Hist1h4k protein_coding protein_coding MGP_WSBEiJ_T0012600.1 MGP_WSBEiJ_G0010730.1 mouse_genomes_project 13 19600354 19607467 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037072.1 MGP_WSBEiJ_G0020192.1 mouse_genomes_project 13 99946927 100012021 + MGP_WSBEiJ_P0037072 Zfp366 protein_coding protein_coding MGP_WSBEiJ_T0003384.1 MGP_WSBEiJ_G0003108.1 mouse_genomes_project 13 54562830 54565433 - Gm15911 antisense antisense MGP_WSBEiJ_T0035478.1 MGP_WSBEiJ_G0019585.1 mouse_genomes_project 13 10900939 10975569 + Arid4b protein_coding processed_transcript MGP_WSBEiJ_T0035479.1 MGP_WSBEiJ_G0019585.1 mouse_genomes_project 13 10901491 11021226 + MGP_WSBEiJ_P0035479 Arid4b protein_coding protein_coding MGP_WSBEiJ_T0035480.1 MGP_WSBEiJ_G0019585.1 mouse_genomes_project 13 10901506 11016941 + MGP_WSBEiJ_P0035480 Arid4b protein_coding protein_coding MGP_WSBEiJ_T0035481.1 MGP_WSBEiJ_G0019585.1 mouse_genomes_project 13 10901518 11050424 + MGP_WSBEiJ_P0035481 Arid4b protein_coding protein_coding MGP_WSBEiJ_T0035482.1 MGP_WSBEiJ_G0019585.1 mouse_genomes_project 13 10901762 10969070 + Arid4b protein_coding processed_transcript MGP_WSBEiJ_T0035483.1 MGP_WSBEiJ_G0019585.1 mouse_genomes_project 13 11021244 11044776 + MGP_WSBEiJ_P0035483 Arid4b protein_coding protein_coding MGP_WSBEiJ_T0035484.1 MGP_WSBEiJ_G0019585.1 mouse_genomes_project 13 11029116 11042279 + Arid4b protein_coding processed_transcript MGP_WSBEiJ_T0035485.1 MGP_WSBEiJ_G0019585.1 mouse_genomes_project 13 11042221 11048811 + Arid4b protein_coding processed_transcript MGP_WSBEiJ_T0012626.1 MGP_WSBEiJ_G0010756.1 mouse_genomes_project 13 28426906 28427166 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036643.1 MGP_WSBEiJ_G0020055.1 mouse_genomes_project 13 69338393 69377126 - MGP_WSBEiJ_P0036643 Srd5a1 protein_coding protein_coding MGP_WSBEiJ_T0036644.1 MGP_WSBEiJ_G0020055.1 mouse_genomes_project 13 69358501 69377032 - Srd5a1 protein_coding processed_transcript MGP_WSBEiJ_T0036742.1 MGP_WSBEiJ_G0020098.1 mouse_genomes_project 13 76071060 76099793 - MGP_WSBEiJ_P0036742 Arsk protein_coding protein_coding MGP_WSBEiJ_T0036743.1 MGP_WSBEiJ_G0020098.1 mouse_genomes_project 13 76081657 76099805 - Arsk protein_coding retained_intron MGP_WSBEiJ_T0006470.1 MGP_WSBEiJ_G0005369.1 mouse_genomes_project 13 47531847 47537141 + Fam120aos lincRNA lincRNA MGP_WSBEiJ_T0003436.1 MGP_WSBEiJ_G0003135.1 mouse_genomes_project 13 112872225 112879661 - Gm15288 antisense antisense MGP_WSBEiJ_T0006434.1 MGP_WSBEiJ_G0005342.1 mouse_genomes_project 13 28924299 28933823 - 4930401O12Rik lincRNA lincRNA MGP_WSBEiJ_T0097804.1 MGP_WSBEiJ_G0036467.1 mouse_genomes_project 13 30545561 30545670 + Gm27342 snRNA snRNA MGP_WSBEiJ_T0011160.1 MGP_WSBEiJ_G0009317.1 mouse_genomes_project 13 92199179 92199479 - Gm24597 misc_RNA misc_RNA MGP_WSBEiJ_T0035638.1 MGP_WSBEiJ_G0019673.1 mouse_genomes_project 13 20736428 20747635 - MGP_WSBEiJ_P0035638 Btn2a2 protein_coding protein_coding MGP_WSBEiJ_T0035639.1 MGP_WSBEiJ_G0019673.1 mouse_genomes_project 13 20736428 20747652 - MGP_WSBEiJ_P0035639 Btn2a2 protein_coding protein_coding MGP_WSBEiJ_T0035640.1 MGP_WSBEiJ_G0019673.1 mouse_genomes_project 13 20736640 20747642 - MGP_WSBEiJ_P0035640 Btn2a2 protein_coding protein_coding MGP_WSBEiJ_T0036293.1 MGP_WSBEiJ_G0019914.1 mouse_genomes_project 13 54264687 54267445 - MGP_WSBEiJ_P0036293 Rab24 protein_coding protein_coding MGP_WSBEiJ_T0006544.1 MGP_WSBEiJ_G0005420.1 mouse_genomes_project 13 113340558 113354741 + Gm15323 lincRNA lincRNA MGP_WSBEiJ_T0035487.1 MGP_WSBEiJ_G0019587.1 mouse_genomes_project 13 11466462 11469170 - MGP_WSBEiJ_P0035487 Mrpl32 protein_coding protein_coding MGP_WSBEiJ_T0036397.1 MGP_WSBEiJ_G0019953.1 mouse_genomes_project 13 57339059 57345107 + MGP_WSBEiJ_P0036397 Idnk protein_coding protein_coding MGP_WSBEiJ_T0036998.1 MGP_WSBEiJ_G0020164.1 mouse_genomes_project 13 96225395 96498433 - MGP_WSBEiJ_P0036998 Iqgap2 protein_coding protein_coding MGP_WSBEiJ_T0035828.1 MGP_WSBEiJ_G0019764.1 mouse_genomes_project 13 30839451 30854516 + MGP_WSBEiJ_P0035828 Serpinb9b protein_coding protein_coding MGP_WSBEiJ_T0036153.1 MGP_WSBEiJ_G0019881.1 mouse_genomes_project 13 51267347 51294930 - MGP_WSBEiJ_P0036153 Diras2 protein_coding protein_coding MGP_WSBEiJ_T0002453.1 MGP_WSBEiJ_G0002367.1 mouse_genomes_project 13 16147325 16147385 + MGP_WSBEiJ_P0002453 Trgj3 TR_J_gene TR_J_gene MGP_WSBEiJ_T0011154.1 MGP_WSBEiJ_G0009311.1 mouse_genomes_project 13 49661784 49661910 + Gm22199 misc_RNA misc_RNA MGP_WSBEiJ_T0036277.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54027505 54058955 + MGP_WSBEiJ_P0036277 Zfp346 protein_coding protein_coding MGP_WSBEiJ_T0036278.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54027508 54046382 + MGP_WSBEiJ_P0036278 Zfp346 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036279.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54027511 54056289 + MGP_WSBEiJ_P0036279 Zfp346 protein_coding protein_coding MGP_WSBEiJ_T0036280.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54027530 54056657 + MGP_WSBEiJ_P0036280 Zfp346 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036281.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54027530 54054507 + MGP_WSBEiJ_P0036281 Zfp346 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036282.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54027534 54056398 + MGP_WSBEiJ_P0036282 Zfp346 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036283.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54027536 54056490 + MGP_WSBEiJ_P0036283 Zfp346 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036284.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54027596 54056277 + MGP_WSBEiJ_P0036284 Zfp346 protein_coding protein_coding MGP_WSBEiJ_T0036285.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54035429 54036312 + Zfp346 protein_coding retained_intron MGP_WSBEiJ_T0036286.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54045919 54056258 + Zfp346 protein_coding retained_intron MGP_WSBEiJ_T0036287.1 MGP_WSBEiJ_G0019910.1 mouse_genomes_project 13 54054130 54056532 + Zfp346 protein_coding retained_intron MGP_WSBEiJ_T0016772.1 MGP_WSBEiJ_G0014679.1 mouse_genomes_project 13 113127581 113128153 + processed_transcript processed_transcript MGP_WSBEiJ_T0006485.1 MGP_WSBEiJ_G0005377.1 mouse_genomes_project 13 54824094 54824827 - Gm28760 lincRNA lincRNA MGP_WSBEiJ_T0006486.1 MGP_WSBEiJ_G0005377.1 mouse_genomes_project 13 54824094 54824830 - Gm28760 lincRNA lincRNA MGP_WSBEiJ_T0035673.1 MGP_WSBEiJ_G0019699.1 mouse_genomes_project 13 21170065 21177051 + MGP_WSBEiJ_P0035673 Slc17a1 protein_coding protein_coding MGP_WSBEiJ_T0035674.1 MGP_WSBEiJ_G0019699.1 mouse_genomes_project 13 21170322 21199505 + MGP_WSBEiJ_P0035674 Slc17a1 protein_coding protein_coding MGP_WSBEiJ_T0035675.1 MGP_WSBEiJ_G0019699.1 mouse_genomes_project 13 21172609 21178865 + Slc17a1 protein_coding processed_transcript MGP_WSBEiJ_T0000869.1 MGP_WSBEiJ_G0000807.1 mouse_genomes_project 13 102683229 102685396 - TEC TEC MGP_WSBEiJ_T0035525.1 MGP_WSBEiJ_G0019601.1 mouse_genomes_project 13 16630687 16685476 - MGP_WSBEiJ_P0035525 Nme8 protein_coding protein_coding MGP_WSBEiJ_T0035526.1 MGP_WSBEiJ_G0019601.1 mouse_genomes_project 13 16630687 16685510 - MGP_WSBEiJ_P0035526 Nme8 protein_coding protein_coding MGP_WSBEiJ_T0035527.1 MGP_WSBEiJ_G0019601.1 mouse_genomes_project 13 16659870 16675576 - Nme8 protein_coding processed_transcript MGP_WSBEiJ_T0006442.1 MGP_WSBEiJ_G0005348.1 mouse_genomes_project 13 29288181 29296985 + Gm11377 lincRNA lincRNA MGP_WSBEiJ_T0037330.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116298863 116314459 + MGP_WSBEiJ_P0037330 Mocs2 protein_coding protein_coding MGP_WSBEiJ_T0037331.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116298903 116301728 + Mocs2 protein_coding retained_intron MGP_WSBEiJ_T0037332.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116298917 116302648 + Mocs2 protein_coding retained_intron MGP_WSBEiJ_T0037333.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116298929 116311843 + Mocs2 protein_coding retained_intron MGP_WSBEiJ_T0037334.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116298929 116311242 + MGP_WSBEiJ_P0037334 Mocs2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037335.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116298936 116306182 + Mocs2 protein_coding retained_intron MGP_WSBEiJ_T0037336.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116298946 116311112 + MGP_WSBEiJ_P0037336 Mocs2 protein_coding protein_coding MGP_WSBEiJ_T0037337.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116298953 116311560 + MGP_WSBEiJ_P0037337 Mocs2 protein_coding protein_coding MGP_WSBEiJ_T0037338.1 MGP_WSBEiJ_G0020273.1 mouse_genomes_project 13 116299564 116305890 + MGP_WSBEiJ_P0037338 Mocs2 protein_coding protein_coding MGP_WSBEiJ_T0096946.1 MGP_WSBEiJ_G0035627.1 mouse_genomes_project 13 10967593 10967706 - n-R5s52 rRNA rRNA MGP_WSBEiJ_T0012664.1 MGP_WSBEiJ_G0010794.1 mouse_genomes_project 13 84883467 84884189 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012596.1 MGP_WSBEiJ_G0010726.1 mouse_genomes_project 13 18565438 18566113 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099066.1 MGP_WSBEiJ_G0037729.1 mouse_genomes_project 13 86274040 86274100 - Gm22574 snoRNA snoRNA MGP_WSBEiJ_T0097818.1 MGP_WSBEiJ_G0036481.1 mouse_genomes_project 13 79481881 79481988 + Gm24863 snRNA snRNA MGP_WSBEiJ_T0037201.1 MGP_WSBEiJ_G0020228.1 mouse_genomes_project 13 105876801 105896338 - MGP_WSBEiJ_P0037201 Fam159b protein_coding protein_coding MGP_WSBEiJ_T0097805.1 MGP_WSBEiJ_G0036468.1 mouse_genomes_project 13 33600352 33600494 + Gm22126 snRNA snRNA MGP_WSBEiJ_T0012594.1 MGP_WSBEiJ_G0010724.1 mouse_genomes_project 13 18348349 18348820 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012639.1 MGP_WSBEiJ_G0010769.1 mouse_genomes_project 13 62938015 62938351 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097828.1 MGP_WSBEiJ_G0036491.1 mouse_genomes_project 13 121572575 121572682 + Gm23308 snRNA snRNA MGP_WSBEiJ_T0035716.1 MGP_WSBEiJ_G0019708.1 mouse_genomes_project 13 22138056 22150381 + MGP_WSBEiJ_P0035716 BC005537 protein_coding protein_coding MGP_WSBEiJ_T0035717.1 MGP_WSBEiJ_G0019708.1 mouse_genomes_project 13 22138419 22149029 + MGP_WSBEiJ_P0035717 BC005537 protein_coding protein_coding MGP_WSBEiJ_T0036592.1 MGP_WSBEiJ_G0020024.1 mouse_genomes_project 13 66677725 66691695 + MGP_WSBEiJ_P0036592 Zfp759 protein_coding protein_coding MGP_WSBEiJ_T0035569.1 MGP_WSBEiJ_G0019621.1 mouse_genomes_project 13 18598073 18599060 - MGP_WSBEiJ_P0035569 protein_coding protein_coding MGP_WSBEiJ_T0097803.1 MGP_WSBEiJ_G0036466.1 mouse_genomes_project 13 29464436 29464544 - Gm25186 snRNA snRNA MGP_WSBEiJ_T0100223.1 MGP_WSBEiJ_G0038773.1 mouse_genomes_project 13 20906992 20907312 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0006492.1 MGP_WSBEiJ_G0005382.1 mouse_genomes_project 13 67164463 67172091 + 9430065F17Rik lincRNA lincRNA MGP_WSBEiJ_T0006493.1 MGP_WSBEiJ_G0005382.1 mouse_genomes_project 13 67164492 67175615 + 9430065F17Rik lincRNA lincRNA MGP_WSBEiJ_T0036179.1 MGP_WSBEiJ_G0019888.1 mouse_genomes_project 13 52354273 52354630 + MGP_WSBEiJ_P0036179 Gm5449 protein_coding protein_coding MGP_WSBEiJ_T0099068.1 MGP_WSBEiJ_G0037731.1 mouse_genomes_project 13 92184792 92184920 + Gm22778 snoRNA snoRNA MGP_WSBEiJ_T0009790.1 MGP_WSBEiJ_G0007947.1 mouse_genomes_project 13 61690636 61690743 - Mir713 miRNA miRNA MGP_WSBEiJ_T0036761.1 MGP_WSBEiJ_G0020103.1 mouse_genomes_project 13 77696715 78145701 + MGP_WSBEiJ_P0036761 Fam172a protein_coding protein_coding MGP_WSBEiJ_T0036762.1 MGP_WSBEiJ_G0020103.1 mouse_genomes_project 13 77696720 78142902 + MGP_WSBEiJ_P0036762 Fam172a protein_coding protein_coding MGP_WSBEiJ_T0006514.1 MGP_WSBEiJ_G0005396.1 mouse_genomes_project 13 84215155 84258285 - Gm17750 lincRNA lincRNA MGP_WSBEiJ_T0036881.1 MGP_WSBEiJ_G0020126.1 mouse_genomes_project 13 91350233 91652305 - MGP_WSBEiJ_P0036881 Atg10 protein_coding protein_coding MGP_WSBEiJ_T0036113.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49055359 49071267 + MGP_WSBEiJ_P0036113 Fbxw17 protein_coding protein_coding MGP_WSBEiJ_T0036114.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49055376 49063154 + MGP_WSBEiJ_P0036114 Fbxw17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036115.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49055381 49067755 + Fbxw17 protein_coding processed_transcript MGP_WSBEiJ_T0036116.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49055381 49071278 + MGP_WSBEiJ_P0036116 Fbxw17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036117.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49055390 49057775 + Fbxw17 protein_coding retained_intron MGP_WSBEiJ_T0036118.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49061350 49064788 + Fbxw17 protein_coding processed_transcript MGP_WSBEiJ_T0036119.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49067467 49069608 + Fbxw17 protein_coding retained_intron MGP_WSBEiJ_T0036120.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49068618 49071274 + Fbxw17 protein_coding retained_intron MGP_WSBEiJ_T0036121.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49068668 49069874 + Fbxw17 protein_coding retained_intron MGP_WSBEiJ_T0036122.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49068854 49069737 + Fbxw17 protein_coding retained_intron MGP_WSBEiJ_T0036123.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49069173 49069851 + Fbxw17 protein_coding retained_intron MGP_WSBEiJ_T0036124.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49069208 49071267 + MGP_WSBEiJ_P0036124 Fbxw17 protein_coding protein_coding MGP_WSBEiJ_T0036125.1 MGP_WSBEiJ_G0019870.1 mouse_genomes_project 13 49069682 49071261 + MGP_WSBEiJ_P0036125 Fbxw17 protein_coding protein_coding MGP_WSBEiJ_T0035344.1 MGP_WSBEiJ_G0019546.1 mouse_genomes_project 13 734281 755297 + MGP_WSBEiJ_P0035344 Akr1c19 protein_coding protein_coding MGP_WSBEiJ_T0035345.1 MGP_WSBEiJ_G0019546.1 mouse_genomes_project 13 739339 755296 + MGP_WSBEiJ_P0035345 Akr1c19 protein_coding protein_coding MGP_WSBEiJ_T0035346.1 MGP_WSBEiJ_G0019546.1 mouse_genomes_project 13 751282 755618 + Akr1c19 protein_coding processed_transcript MGP_WSBEiJ_T0036795.1 MGP_WSBEiJ_G0020110.1 mouse_genomes_project 13 81811166 81849370 + MGP_WSBEiJ_P0036795 Mblac2 protein_coding protein_coding MGP_WSBEiJ_T0035796.1 MGP_WSBEiJ_G0019747.1 mouse_genomes_project 13 28353350 28405155 + MGP_WSBEiJ_P0035796 Dusp22 protein_coding protein_coding MGP_WSBEiJ_T0035797.1 MGP_WSBEiJ_G0019747.1 mouse_genomes_project 13 28353412 28400031 + MGP_WSBEiJ_P0035797 Dusp22 protein_coding protein_coding MGP_WSBEiJ_T0035798.1 MGP_WSBEiJ_G0019747.1 mouse_genomes_project 13 28353461 28402804 + MGP_WSBEiJ_P0035798 Dusp22 protein_coding protein_coding MGP_WSBEiJ_T0037315.1 MGP_WSBEiJ_G0020263.1 mouse_genomes_project 13 114435653 114439303 - MGP_WSBEiJ_P0037315 Gpx8 protein_coding protein_coding MGP_WSBEiJ_T0035711.1 MGP_WSBEiJ_G0019707.1 mouse_genomes_project 13 22088720 22105125 - MGP_WSBEiJ_P0035711 Gmnn protein_coding protein_coding MGP_WSBEiJ_T0035712.1 MGP_WSBEiJ_G0019707.1 mouse_genomes_project 13 22088720 22105063 - MGP_WSBEiJ_P0035712 Gmnn protein_coding protein_coding MGP_WSBEiJ_T0035713.1 MGP_WSBEiJ_G0019707.1 mouse_genomes_project 13 22088966 22104678 - MGP_WSBEiJ_P0035713 Gmnn protein_coding protein_coding MGP_WSBEiJ_T0035714.1 MGP_WSBEiJ_G0019707.1 mouse_genomes_project 13 22089063 22104642 - MGP_WSBEiJ_P0035714 Gmnn protein_coding protein_coding MGP_WSBEiJ_T0035715.1 MGP_WSBEiJ_G0019707.1 mouse_genomes_project 13 22090604 22105099 - MGP_WSBEiJ_P0035715 Gmnn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036402.1 MGP_WSBEiJ_G0019956.1 mouse_genomes_project 13 57475711 57545357 - MGP_WSBEiJ_P0036402 Kif27 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035663.1 MGP_WSBEiJ_G0019692.1 mouse_genomes_project 13 21053717 21054114 + MGP_WSBEiJ_P0035663 Hist1h4b protein_coding protein_coding MGP_WSBEiJ_T0037176.1 MGP_WSBEiJ_G0020221.1 mouse_genomes_project 13 105147576 105185599 - MGP_WSBEiJ_P0037176 Trappc13 protein_coding protein_coding MGP_WSBEiJ_T0037177.1 MGP_WSBEiJ_G0020221.1 mouse_genomes_project 13 105147583 105185555 - MGP_WSBEiJ_P0037177 Trappc13 protein_coding protein_coding MGP_WSBEiJ_T0037178.1 MGP_WSBEiJ_G0020221.1 mouse_genomes_project 13 105148755 105185553 - MGP_WSBEiJ_P0037178 Trappc13 protein_coding protein_coding MGP_WSBEiJ_T0037179.1 MGP_WSBEiJ_G0020221.1 mouse_genomes_project 13 105149392 105185537 - MGP_WSBEiJ_P0037179 Trappc13 protein_coding protein_coding MGP_WSBEiJ_T0037180.1 MGP_WSBEiJ_G0020221.1 mouse_genomes_project 13 105173338 105185589 - Trappc13 protein_coding retained_intron MGP_WSBEiJ_T0037181.1 MGP_WSBEiJ_G0020221.1 mouse_genomes_project 13 105180861 105185569 - Trappc13 protein_coding processed_transcript MGP_WSBEiJ_T0035414.1 MGP_WSBEiJ_G0019565.1 mouse_genomes_project 13 5843365 6250583 + MGP_WSBEiJ_P0035414 Dip2c protein_coding protein_coding MGP_WSBEiJ_T0035415.1 MGP_WSBEiJ_G0019565.1 mouse_genomes_project 13 5843770 6247829 + MGP_WSBEiJ_P0035415 Dip2c protein_coding protein_coding MGP_WSBEiJ_T0035416.1 MGP_WSBEiJ_G0019565.1 mouse_genomes_project 13 5843819 6247829 + MGP_WSBEiJ_P0035416 Dip2c protein_coding protein_coding MGP_WSBEiJ_T0035377.1 MGP_WSBEiJ_G0019557.1 mouse_genomes_project 13 4572771 4578547 - MGP_WSBEiJ_P0035377 protein_coding protein_coding MGP_WSBEiJ_T0097819.1 MGP_WSBEiJ_G0036482.1 mouse_genomes_project 13 80198869 80198997 + Gm24635 snRNA snRNA MGP_WSBEiJ_T0099062.1 MGP_WSBEiJ_G0037725.1 mouse_genomes_project 13 76616692 76616824 - Gm24519 snoRNA snoRNA MGP_WSBEiJ_T0036041.1 MGP_WSBEiJ_G0019845.1 mouse_genomes_project 13 45474873 45484991 + MGP_WSBEiJ_P0036041 Kdm1b protein_coding protein_coding MGP_WSBEiJ_T0036042.1 MGP_WSBEiJ_G0019845.1 mouse_genomes_project 13 45474878 45518742 + MGP_WSBEiJ_P0036042 Kdm1b protein_coding protein_coding MGP_WSBEiJ_T0036043.1 MGP_WSBEiJ_G0019845.1 mouse_genomes_project 13 45498263 45506417 + Kdm1b protein_coding retained_intron MGP_WSBEiJ_T0036044.1 MGP_WSBEiJ_G0019845.1 mouse_genomes_project 13 45500583 45518747 + Kdm1b protein_coding processed_transcript MGP_WSBEiJ_T0037111.1 MGP_WSBEiJ_G0020204.1 mouse_genomes_project 13 101476064 101499145 - MGP_WSBEiJ_P0037111 Marveld2 protein_coding protein_coding MGP_WSBEiJ_T0037112.1 MGP_WSBEiJ_G0020204.1 mouse_genomes_project 13 101476064 101499118 - MGP_WSBEiJ_P0037112 Marveld2 protein_coding protein_coding MGP_WSBEiJ_T0037113.1 MGP_WSBEiJ_G0020204.1 mouse_genomes_project 13 101477327 101499085 - MGP_WSBEiJ_P0037113 Marveld2 protein_coding protein_coding MGP_WSBEiJ_T0036913.1 MGP_WSBEiJ_G0020133.1 mouse_genomes_project 13 92751882 92753080 + MGP_WSBEiJ_P0036913 Gm20379 protein_coding protein_coding MGP_WSBEiJ_T0006528.1 MGP_WSBEiJ_G0005406.1 mouse_genomes_project 13 99839405 99849398 - 2310020H05Rik lincRNA lincRNA MGP_WSBEiJ_T0035922.1 MGP_WSBEiJ_G0019798.1 mouse_genomes_project 13 36382883 36544182 + MGP_WSBEiJ_P0035922 Bmp6 protein_coding protein_coding MGP_WSBEiJ_T0036933.1 MGP_WSBEiJ_G0020141.1 mouse_genomes_project 13 93308615 93322071 + MGP_WSBEiJ_P0036933 Mtx3 protein_coding protein_coding MGP_WSBEiJ_T0036999.1 MGP_WSBEiJ_G0020165.1 mouse_genomes_project 13 96297341 96303197 + MGP_WSBEiJ_P0036999 F2rl2 protein_coding protein_coding MGP_WSBEiJ_T0037186.1 MGP_WSBEiJ_G0020223.1 mouse_genomes_project 13 105213074 105237854 - MGP_WSBEiJ_P0037186 Ppwd1 protein_coding protein_coding MGP_WSBEiJ_T0036480.1 MGP_WSBEiJ_G0019979.1 mouse_genomes_project 13 60202329 60249414 - MGP_WSBEiJ_P0036480 Tpbpb protein_coding protein_coding MGP_WSBEiJ_T0036769.1 MGP_WSBEiJ_G0020106.1 mouse_genomes_project 13 80954463 80960762 + Arrdc3 protein_coding retained_intron MGP_WSBEiJ_T0036770.1 MGP_WSBEiJ_G0020106.1 mouse_genomes_project 13 80954489 80967156 + MGP_WSBEiJ_P0036770 Arrdc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036771.1 MGP_WSBEiJ_G0020106.1 mouse_genomes_project 13 80954731 80967154 + MGP_WSBEiJ_P0036771 Arrdc3 protein_coding protein_coding MGP_WSBEiJ_T0036772.1 MGP_WSBEiJ_G0020106.1 mouse_genomes_project 13 80961222 80962371 + Arrdc3 protein_coding retained_intron MGP_WSBEiJ_T0036773.1 MGP_WSBEiJ_G0020106.1 mouse_genomes_project 13 80961636 80962761 + Arrdc3 protein_coding retained_intron MGP_WSBEiJ_T0012638.1 MGP_WSBEiJ_G0010768.1 mouse_genomes_project 13 60074864 60075230 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036472.1 MGP_WSBEiJ_G0019973.1 mouse_genomes_project 13 59490996 59491998 + MGP_WSBEiJ_P0036472 Gm5084 protein_coding protein_coding MGP_WSBEiJ_T0036490.1 MGP_WSBEiJ_G0019988.1 mouse_genomes_project 13 60968576 60979901 - MGP_WSBEiJ_P0036490 protein_coding protein_coding MGP_WSBEiJ_T0035653.1 MGP_WSBEiJ_G0019684.1 mouse_genomes_project 13 20990195 20990924 + MGP_WSBEiJ_P0035653 Hist1h1t protein_coding protein_coding MGP_WSBEiJ_T0035579.1 MGP_WSBEiJ_G0019628.1 mouse_genomes_project 13 18731314 18733475 - MGP_WSBEiJ_P0035579 protein_coding protein_coding MGP_WSBEiJ_T0036465.1 MGP_WSBEiJ_G0019968.1 mouse_genomes_project 13 58982621 58988448 - MGP_WSBEiJ_P0036465 Spata31d1d protein_coding protein_coding MGP_WSBEiJ_T0096776.1 MGP_WSBEiJ_G0035457.1 mouse_genomes_project 13 89937750 89938899 - pseudogene pseudogene MGP_WSBEiJ_T0037306.1 MGP_WSBEiJ_G0020258.1 mouse_genomes_project 13 114313114 114356576 + MGP_WSBEiJ_P0037306 Dhx29 protein_coding protein_coding MGP_WSBEiJ_T0035523.1 MGP_WSBEiJ_G0019599.1 mouse_genomes_project 13 16576059 16605517 - MGP_WSBEiJ_P0035523 Epdr1 protein_coding protein_coding MGP_WSBEiJ_T0035679.1 MGP_WSBEiJ_G0019702.1 mouse_genomes_project 13 21240812 21241202 + MGP_WSBEiJ_P0035679 Hist1h2aa protein_coding protein_coding MGP_WSBEiJ_T0009793.1 MGP_WSBEiJ_G0007950.1 mouse_genomes_project 13 62796441 62796526 - Mir3074-1 miRNA miRNA MGP_WSBEiJ_T0036555.1 MGP_WSBEiJ_G0020009.1 mouse_genomes_project 13 64567027 64619876 - MGP_WSBEiJ_P0036555 Mfsd14b protein_coding protein_coding MGP_WSBEiJ_T0036556.1 MGP_WSBEiJ_G0020009.1 mouse_genomes_project 13 64567416 64619883 - MGP_WSBEiJ_P0036556 Mfsd14b protein_coding protein_coding MGP_WSBEiJ_T0036557.1 MGP_WSBEiJ_G0020009.1 mouse_genomes_project 13 64568941 64572188 - Mfsd14b protein_coding retained_intron MGP_WSBEiJ_T0012588.1 MGP_WSBEiJ_G0010718.1 mouse_genomes_project 13 5783653 5784950 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037016.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97281403 97304772 - MGP_WSBEiJ_P0037016 Hmgcr protein_coding protein_coding MGP_WSBEiJ_T0037017.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97282712 97300508 - MGP_WSBEiJ_P0037017 Hmgcr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037018.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97282879 97285235 - MGP_WSBEiJ_P0037018 Hmgcr protein_coding protein_coding MGP_WSBEiJ_T0037019.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97283785 97300455 - MGP_WSBEiJ_P0037019 Hmgcr protein_coding protein_coding MGP_WSBEiJ_T0037020.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97284552 97289212 - MGP_WSBEiJ_P0037020 Hmgcr protein_coding protein_coding MGP_WSBEiJ_T0037021.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97292626 97304711 - Hmgcr protein_coding retained_intron MGP_WSBEiJ_T0037022.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97293892 97304659 - MGP_WSBEiJ_P0037022 Hmgcr protein_coding protein_coding MGP_WSBEiJ_T0037023.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97299450 97300332 - Hmgcr protein_coding retained_intron MGP_WSBEiJ_T0037024.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97299860 97303392 - MGP_WSBEiJ_P0037024 Hmgcr protein_coding protein_coding MGP_WSBEiJ_T0037025.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97299865 97304304 - MGP_WSBEiJ_P0037025 Hmgcr protein_coding protein_coding MGP_WSBEiJ_T0037026.1 MGP_WSBEiJ_G0020172.1 mouse_genomes_project 13 97300063 97304684 - Hmgcr protein_coding retained_intron MGP_WSBEiJ_T0012620.1 MGP_WSBEiJ_G0010750.1 mouse_genomes_project 13 24760776 24761730 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036638.1 MGP_WSBEiJ_G0020053.1 mouse_genomes_project 13 69252053 69290390 - MGP_WSBEiJ_P0036638 Papd7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036639.1 MGP_WSBEiJ_G0020053.1 mouse_genomes_project 13 69252061 69292801 - MGP_WSBEiJ_P0036639 Papd7 protein_coding protein_coding MGP_WSBEiJ_T0036640.1 MGP_WSBEiJ_G0020053.1 mouse_genomes_project 13 69252064 69290072 - MGP_WSBEiJ_P0036640 Papd7 protein_coding protein_coding MGP_WSBEiJ_T0036065.1 MGP_WSBEiJ_G0019854.1 mouse_genomes_project 13 47439506 47531702 - MGP_WSBEiJ_P0036065 Fam120a protein_coding protein_coding MGP_WSBEiJ_T0012679.1 MGP_WSBEiJ_G0010809.1 mouse_genomes_project 13 113212229 113213753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036858.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90016811 90105894 - MGP_WSBEiJ_P0036858 Vcan protein_coding protein_coding MGP_WSBEiJ_T0036859.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90017838 90105707 - MGP_WSBEiJ_P0036859 Vcan protein_coding protein_coding MGP_WSBEiJ_T0036860.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90018143 90105719 - MGP_WSBEiJ_P0036860 Vcan protein_coding protein_coding MGP_WSBEiJ_T0036861.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90018515 90039361 - MGP_WSBEiJ_P0036861 Vcan protein_coding protein_coding MGP_WSBEiJ_T0036862.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90018554 90105629 - MGP_WSBEiJ_P0036862 Vcan protein_coding protein_coding MGP_WSBEiJ_T0036863.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90019153 90040153 - MGP_WSBEiJ_P0036863 Vcan protein_coding protein_coding MGP_WSBEiJ_T0036864.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90071936 90084235 - Vcan protein_coding retained_intron MGP_WSBEiJ_T0036865.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90072473 90105703 - MGP_WSBEiJ_P0036865 Vcan protein_coding protein_coding MGP_WSBEiJ_T0036866.1 MGP_WSBEiJ_G0020120.1 mouse_genomes_project 13 90087714 90102628 - MGP_WSBEiJ_P0036866 Vcan protein_coding protein_coding MGP_WSBEiJ_T0037085.1 MGP_WSBEiJ_G0020199.1 mouse_genomes_project 13 100896697 100903238 + MGP_WSBEiJ_P0037085 Serf1 protein_coding protein_coding MGP_WSBEiJ_T0037086.1 MGP_WSBEiJ_G0020199.1 mouse_genomes_project 13 100896770 100899703 + MGP_WSBEiJ_P0037086 Serf1 protein_coding protein_coding MGP_WSBEiJ_T0037087.1 MGP_WSBEiJ_G0020199.1 mouse_genomes_project 13 100896840 100903571 + MGP_WSBEiJ_P0037087 Serf1 protein_coding protein_coding MGP_WSBEiJ_T0037088.1 MGP_WSBEiJ_G0020199.1 mouse_genomes_project 13 100897026 100903238 + MGP_WSBEiJ_P0037088 Serf1 protein_coding protein_coding MGP_WSBEiJ_T0037089.1 MGP_WSBEiJ_G0020199.1 mouse_genomes_project 13 100897081 100903231 + MGP_WSBEiJ_P0037089 Serf1 protein_coding protein_coding MGP_WSBEiJ_T0003360.1 MGP_WSBEiJ_G0003088.1 mouse_genomes_project 13 18839597 18840935 + Gm11274 antisense antisense MGP_WSBEiJ_T0097792.1 MGP_WSBEiJ_G0036455.1 mouse_genomes_project 13 10929059 10929166 + Gm26129 snRNA snRNA MGP_WSBEiJ_T0036464.1 MGP_WSBEiJ_G0019967.1 mouse_genomes_project 13 58969492 58976009 + MGP_WSBEiJ_P0036464 Spata31d1b protein_coding protein_coding MGP_WSBEiJ_T0006503.1 MGP_WSBEiJ_G0005391.1 mouse_genomes_project 13 81039195 81205901 + 9330111N05Rik lincRNA lincRNA MGP_WSBEiJ_T0006504.1 MGP_WSBEiJ_G0005391.1 mouse_genomes_project 13 81040386 81162815 + 9330111N05Rik lincRNA lincRNA MGP_WSBEiJ_T0006505.1 MGP_WSBEiJ_G0005391.1 mouse_genomes_project 13 81062246 81208341 + 9330111N05Rik lincRNA lincRNA MGP_WSBEiJ_T0035959.1 MGP_WSBEiJ_G0019817.1 mouse_genomes_project 13 39831212 39832040 + MGP_WSBEiJ_P0035959 Gm5082 protein_coding protein_coding MGP_WSBEiJ_T0035872.1 MGP_WSBEiJ_G0019779.1 mouse_genomes_project 13 32809121 32836110 + MGP_WSBEiJ_P0035872 Prpf4b protein_coding protein_coding MGP_WSBEiJ_T0100531.1 MGP_WSBEiJ_G0038989.1 mouse_genomes_project 13 19591288 19592059 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035446.1 MGP_WSBEiJ_G0019571.1 mouse_genomes_project 13 9045537 9089938 + MGP_WSBEiJ_P0035446 Heatr1 protein_coding protein_coding MGP_WSBEiJ_T0035818.1 MGP_WSBEiJ_G0019759.1 mouse_genomes_project 13 30592496 30592889 - MGP_WSBEiJ_P0035818 D930007J09Rik protein_coding protein_coding MGP_WSBEiJ_T0035740.1 MGP_WSBEiJ_G0019718.1 mouse_genomes_project 13 24471505 24480573 + MGP_WSBEiJ_P0035740 Prl protein_coding protein_coding MGP_WSBEiJ_T0000852.1 MGP_WSBEiJ_G0000790.1 mouse_genomes_project 13 63063088 63064045 - TEC TEC MGP_WSBEiJ_T0009766.1 MGP_WSBEiJ_G0007923.1 mouse_genomes_project 13 19043532 19043621 - Gm44456 miRNA miRNA MGP_WSBEiJ_T0035621.1 MGP_WSBEiJ_G0019660.1 mouse_genomes_project 13 19695282 19696191 + MGP_WSBEiJ_P0035621 Vmn1r204 protein_coding protein_coding MGP_WSBEiJ_T0000854.1 MGP_WSBEiJ_G0000792.1 mouse_genomes_project 13 67052983 67054814 + TEC TEC MGP_WSBEiJ_T0097824.1 MGP_WSBEiJ_G0036487.1 mouse_genomes_project 13 101484461 101484568 + Gm24261 snRNA snRNA MGP_WSBEiJ_T0003423.1 MGP_WSBEiJ_G0003127.1 mouse_genomes_project 13 95781420 95781820 + antisense antisense MGP_WSBEiJ_T0037165.1 MGP_WSBEiJ_G0020217.1 mouse_genomes_project 13 104737275 104761009 - MGP_WSBEiJ_P0037165 Srek1 protein_coding protein_coding MGP_WSBEiJ_T0036298.1 MGP_WSBEiJ_G0019917.1 mouse_genomes_project 13 54291132 54314243 - MGP_WSBEiJ_P0036298 Lman2 protein_coding protein_coding MGP_WSBEiJ_T0037012.1 MGP_WSBEiJ_G0020170.1 mouse_genomes_project 13 97121237 97121625 + MGP_WSBEiJ_P0037012 Gm17622 protein_coding protein_coding MGP_WSBEiJ_T0006523.1 MGP_WSBEiJ_G0005403.1 mouse_genomes_project 13 98392907 98408497 - 5330416C01Rik lincRNA lincRNA MGP_WSBEiJ_T0006524.1 MGP_WSBEiJ_G0005403.1 mouse_genomes_project 13 98394730 98404227 - 5330416C01Rik lincRNA lincRNA MGP_WSBEiJ_T0006525.1 MGP_WSBEiJ_G0005403.1 mouse_genomes_project 13 98405779 98408465 - 5330416C01Rik lincRNA lincRNA MGP_WSBEiJ_T0037350.1 MGP_WSBEiJ_G0020281.1 mouse_genomes_project 13 119227281 119646354 + MGP_WSBEiJ_P0037350 Hcn1 protein_coding protein_coding MGP_WSBEiJ_T0099060.1 MGP_WSBEiJ_G0037723.1 mouse_genomes_project 13 75907024 75907154 + Gm24163 snoRNA snoRNA MGP_WSBEiJ_T0003380.1 MGP_WSBEiJ_G0003104.1 mouse_genomes_project 13 41372956 41383328 - Gm15813 antisense antisense MGP_WSBEiJ_T0035964.1 MGP_WSBEiJ_G0019819.1 mouse_genomes_project 13 40253081 40388879 + MGP_WSBEiJ_P0035964 Hivep1 protein_coding protein_coding MGP_WSBEiJ_T0096952.1 MGP_WSBEiJ_G0035633.1 mouse_genomes_project 13 114805047 114805148 + Gm22385 rRNA rRNA MGP_WSBEiJ_T0011150.1 MGP_WSBEiJ_G0009307.1 mouse_genomes_project 13 32192847 32193135 - Gm24530 misc_RNA misc_RNA MGP_WSBEiJ_T0000864.1 MGP_WSBEiJ_G0000802.1 mouse_genomes_project 13 95154001 95154648 + TEC TEC MGP_WSBEiJ_T0035926.1 MGP_WSBEiJ_G0019800.1 mouse_genomes_project 13 36657059 36691279 - MGP_WSBEiJ_P0035926 Bloc1s5 protein_coding protein_coding MGP_WSBEiJ_T0036617.1 MGP_WSBEiJ_G0020041.1 mouse_genomes_project 13 67120862 67131257 - MGP_WSBEiJ_P0036617 Zfp87 protein_coding protein_coding MGP_WSBEiJ_T0036618.1 MGP_WSBEiJ_G0020041.1 mouse_genomes_project 13 67122658 67131201 - MGP_WSBEiJ_P0036618 Zfp87 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036619.1 MGP_WSBEiJ_G0020041.1 mouse_genomes_project 13 67123063 67131226 - MGP_WSBEiJ_P0036619 Zfp87 protein_coding protein_coding MGP_WSBEiJ_T0036620.1 MGP_WSBEiJ_G0020041.1 mouse_genomes_project 13 67126120 67131257 - MGP_WSBEiJ_P0036620 Zfp87 protein_coding protein_coding MGP_WSBEiJ_T0009809.1 MGP_WSBEiJ_G0007966.1 mouse_genomes_project 13 114428879 114428988 + Mir449c miRNA miRNA MGP_WSBEiJ_T0037303.1 MGP_WSBEiJ_G0020256.1 mouse_genomes_project 13 114175973 114252354 + MGP_WSBEiJ_P0037303 Plpp1 protein_coding protein_coding MGP_WSBEiJ_T0037304.1 MGP_WSBEiJ_G0020256.1 mouse_genomes_project 13 114176002 114252108 + MGP_WSBEiJ_P0037304 Plpp1 protein_coding protein_coding MGP_WSBEiJ_T0009808.1 MGP_WSBEiJ_G0007965.1 mouse_genomes_project 13 111128728 111128808 + Mir1904 miRNA miRNA MGP_WSBEiJ_T0036299.1 MGP_WSBEiJ_G0019918.1 mouse_genomes_project 13 54322084 54337082 + MGP_WSBEiJ_P0036299 Rgs14 protein_coding protein_coding MGP_WSBEiJ_T0036300.1 MGP_WSBEiJ_G0019918.1 mouse_genomes_project 13 54322123 54331837 + MGP_WSBEiJ_P0036300 Rgs14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036301.1 MGP_WSBEiJ_G0019918.1 mouse_genomes_project 13 54331560 54337081 + Rgs14 protein_coding retained_intron MGP_WSBEiJ_T0097816.1 MGP_WSBEiJ_G0036479.1 mouse_genomes_project 13 62284434 62284541 + Gm25448 snRNA snRNA MGP_WSBEiJ_T0006538.1 MGP_WSBEiJ_G0005415.1 mouse_genomes_project 13 112817705 112851492 - Gm15290 lincRNA lincRNA MGP_WSBEiJ_T0011149.1 MGP_WSBEiJ_G0009306.1 mouse_genomes_project 13 13757306 13757594 - Gm26098 misc_RNA misc_RNA MGP_WSBEiJ_T0036991.1 MGP_WSBEiJ_G0020158.1 mouse_genomes_project 13 95901366 95913968 + MGP_WSBEiJ_P0036991 Zbed3 protein_coding protein_coding MGP_WSBEiJ_T0035564.1 MGP_WSBEiJ_G0019618.1 mouse_genomes_project 13 18537536 18543010 + MGP_WSBEiJ_P0035564 protein_coding protein_coding MGP_WSBEiJ_T0037373.1 MGP_WSBEiJ_G0020290.1 mouse_genomes_project 13 121340204 121342548 + MGP_WSBEiJ_P0037373 protein_coding protein_coding MGP_WSBEiJ_T0035536.1 MGP_WSBEiJ_G0019607.1 mouse_genomes_project 13 18184433 18185497 - MGP_WSBEiJ_P0035536 Olfr1368 protein_coding protein_coding MGP_WSBEiJ_T0035537.1 MGP_WSBEiJ_G0019607.1 mouse_genomes_project 13 18185059 18188321 - MGP_WSBEiJ_P0035537 Olfr1368 protein_coding protein_coding MGP_WSBEiJ_T0035398.1 MGP_WSBEiJ_G0019560.1 mouse_genomes_project 13 5433002 5439974 + MGP_WSBEiJ_P0035398 Idi1 protein_coding protein_coding MGP_WSBEiJ_T0035399.1 MGP_WSBEiJ_G0019560.1 mouse_genomes_project 13 5433444 5438081 + MGP_WSBEiJ_P0035399 Idi1 protein_coding protein_coding MGP_WSBEiJ_T0035400.1 MGP_WSBEiJ_G0019560.1 mouse_genomes_project 13 5433494 5438881 + MGP_WSBEiJ_P0035400 Idi1 protein_coding protein_coding MGP_WSBEiJ_T0035401.1 MGP_WSBEiJ_G0019560.1 mouse_genomes_project 13 5433495 5438123 + MGP_WSBEiJ_P0035401 Idi1 protein_coding protein_coding MGP_WSBEiJ_T0035402.1 MGP_WSBEiJ_G0019560.1 mouse_genomes_project 13 5434570 5437968 + Idi1 protein_coding retained_intron MGP_WSBEiJ_T0035896.1 MGP_WSBEiJ_G0019788.1 mouse_genomes_project 13 34160639 34505425 + MGP_WSBEiJ_P0035896 Fars2 protein_coding protein_coding MGP_WSBEiJ_T0035491.1 MGP_WSBEiJ_G0019590.1 mouse_genomes_project 13 12317472 12574867 + MGP_WSBEiJ_P0035491 Gli3 protein_coding protein_coding MGP_WSBEiJ_T0035492.1 MGP_WSBEiJ_G0019590.1 mouse_genomes_project 13 12317488 12498755 + Gli3 protein_coding processed_transcript MGP_WSBEiJ_T0035493.1 MGP_WSBEiJ_G0019590.1 mouse_genomes_project 13 12317944 12521254 + Gli3 protein_coding retained_intron MGP_WSBEiJ_T0035494.1 MGP_WSBEiJ_G0019590.1 mouse_genomes_project 13 12318201 12589754 + MGP_WSBEiJ_P0035494 Gli3 protein_coding protein_coding MGP_WSBEiJ_T0035606.1 MGP_WSBEiJ_G0019645.1 mouse_genomes_project 13 19164567 19165297 - MGP_WSBEiJ_P0035606 Hist1h4i protein_coding protein_coding MGP_WSBEiJ_T0035524.1 MGP_WSBEiJ_G0019600.1 mouse_genomes_project 13 16608881 16618492 + MGP_WSBEiJ_P0035524 Sfrp4 protein_coding protein_coding MGP_WSBEiJ_T0035874.1 MGP_WSBEiJ_G0019781.1 mouse_genomes_project 13 32860068 32894111 + MGP_WSBEiJ_P0035874 4933417A18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035875.1 MGP_WSBEiJ_G0019781.1 mouse_genomes_project 13 32860068 32891433 + MGP_WSBEiJ_P0035875 4933417A18Rik protein_coding protein_coding MGP_WSBEiJ_T0006484.1 MGP_WSBEiJ_G0005376.1 mouse_genomes_project 13 53824913 53829158 - 4930526F13Rik lincRNA lincRNA MGP_WSBEiJ_T0036712.1 MGP_WSBEiJ_G0020085.1 mouse_genomes_project 13 74284044 74312352 - MGP_WSBEiJ_P0036712 Sdha protein_coding protein_coding MGP_WSBEiJ_T0036713.1 MGP_WSBEiJ_G0020085.1 mouse_genomes_project 13 74284522 74286048 - Sdha protein_coding retained_intron MGP_WSBEiJ_T0036714.1 MGP_WSBEiJ_G0020085.1 mouse_genomes_project 13 74289025 74290200 - Sdha protein_coding retained_intron MGP_WSBEiJ_T0036715.1 MGP_WSBEiJ_G0020085.1 mouse_genomes_project 13 74299113 74312274 - Sdha protein_coding processed_transcript MGP_WSBEiJ_T0036716.1 MGP_WSBEiJ_G0020085.1 mouse_genomes_project 13 74300644 74301407 - Sdha protein_coding retained_intron MGP_WSBEiJ_T0036717.1 MGP_WSBEiJ_G0020085.1 mouse_genomes_project 13 74304887 74312311 - Sdha protein_coding retained_intron MGP_WSBEiJ_T0036718.1 MGP_WSBEiJ_G0020085.1 mouse_genomes_project 13 74306355 74312229 - Sdha protein_coding processed_transcript MGP_WSBEiJ_T0036719.1 MGP_WSBEiJ_G0020085.1 mouse_genomes_project 13 74306394 74312307 - Sdha protein_coding processed_transcript MGP_WSBEiJ_T0036667.1 MGP_WSBEiJ_G0020064.1 mouse_genomes_project 13 73228040 73228340 + MGP_WSBEiJ_P0036667 Gm10263 protein_coding protein_coding MGP_WSBEiJ_T0036857.1 MGP_WSBEiJ_G0020119.1 mouse_genomes_project 13 89897885 89972161 + MGP_WSBEiJ_P0036857 Hapln1 protein_coding protein_coding MGP_WSBEiJ_T0006526.1 MGP_WSBEiJ_G0005404.1 mouse_genomes_project 13 99159212 99171232 - 2310005E17Rik lincRNA lincRNA MGP_WSBEiJ_T0100562.1 MGP_WSBEiJ_G0039020.1 mouse_genomes_project 13 31645137 31648919 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012612.1 MGP_WSBEiJ_G0010742.1 mouse_genomes_project 13 22809971 22810679 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037203.1 MGP_WSBEiJ_G0020230.1 mouse_genomes_project 13 106122314 106165057 + MGP_WSBEiJ_P0037203 4933425L06Rik protein_coding protein_coding MGP_WSBEiJ_T0099067.1 MGP_WSBEiJ_G0037730.1 mouse_genomes_project 13 90484250 90484384 + Gm24507 snoRNA snoRNA MGP_WSBEiJ_T0036593.1 MGP_WSBEiJ_G0020025.1 mouse_genomes_project 13 66714004 67560685 + MGP_WSBEiJ_P0036593 Gm10037 protein_coding protein_coding MGP_WSBEiJ_T0037309.1 MGP_WSBEiJ_G0020261.1 mouse_genomes_project 13 114428007 114431211 + MGP_WSBEiJ_P0037309 Cdc20b protein_coding protein_coding MGP_WSBEiJ_T0037310.1 MGP_WSBEiJ_G0020261.1 mouse_genomes_project 13 114428275 114488982 + MGP_WSBEiJ_P0037310 Cdc20b protein_coding protein_coding MGP_WSBEiJ_T0037311.1 MGP_WSBEiJ_G0020261.1 mouse_genomes_project 13 114428275 114488982 + MGP_WSBEiJ_P0037311 Cdc20b protein_coding protein_coding MGP_WSBEiJ_T0037312.1 MGP_WSBEiJ_G0020261.1 mouse_genomes_project 13 114428275 114488982 + MGP_WSBEiJ_P0037312 Cdc20b protein_coding protein_coding MGP_WSBEiJ_T0037313.1 MGP_WSBEiJ_G0020261.1 mouse_genomes_project 13 114428283 114431211 + MGP_WSBEiJ_P0037313 Cdc20b protein_coding protein_coding MGP_WSBEiJ_T0006427.1 MGP_WSBEiJ_G0005338.1 mouse_genomes_project 13 24737443 24752744 + 4930511O05Rik lincRNA lincRNA MGP_WSBEiJ_T0035464.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10837971 10875599 - MGP_WSBEiJ_P0035464 Tbce protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035465.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10837973 10845556 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0035466.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10837973 10841616 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0035467.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10837974 10875658 - MGP_WSBEiJ_P0035467 Tbce protein_coding protein_coding MGP_WSBEiJ_T0035468.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10837975 10875658 - MGP_WSBEiJ_P0035468 Tbce protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035469.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10843082 10875641 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0035470.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10845240 10849899 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0035471.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10845278 10849106 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0035472.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10845285 10849892 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0035473.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10845293 10849558 - Tbce protein_coding processed_transcript MGP_WSBEiJ_T0035474.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10850439 10875632 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0035475.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10854434 10875616 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0035476.1 MGP_WSBEiJ_G0019583.1 mouse_genomes_project 13 10859348 10875637 - Tbce protein_coding retained_intron MGP_WSBEiJ_T0006487.1 MGP_WSBEiJ_G0005378.1 mouse_genomes_project 13 55227380 55250442 - 4930550C17Rik lincRNA lincRNA MGP_WSBEiJ_T0035889.1 MGP_WSBEiJ_G0019785.1 mouse_genomes_project 13 33838895 33851775 - MGP_WSBEiJ_P0035889 Rpp40 protein_coding protein_coding MGP_WSBEiJ_T0035890.1 MGP_WSBEiJ_G0019785.1 mouse_genomes_project 13 33842120 33844285 - MGP_WSBEiJ_P0035890 Rpp40 protein_coding protein_coding MGP_WSBEiJ_T0035891.1 MGP_WSBEiJ_G0019785.1 mouse_genomes_project 13 33842128 33851744 - Rpp40 protein_coding retained_intron MGP_WSBEiJ_T0035892.1 MGP_WSBEiJ_G0019785.1 mouse_genomes_project 13 33842131 33851760 - MGP_WSBEiJ_P0035892 Rpp40 protein_coding protein_coding MGP_WSBEiJ_T0000844.1 MGP_WSBEiJ_G0000783.1 mouse_genomes_project 13 35501331 35501671 - TEC TEC MGP_WSBEiJ_T0035652.1 MGP_WSBEiJ_G0019683.1 mouse_genomes_project 13 20908017 20909664 - MGP_WSBEiJ_P0035652 Hist1h1e protein_coding protein_coding MGP_WSBEiJ_T0036351.1 MGP_WSBEiJ_G0019937.1 mouse_genomes_project 13 54812633 54818986 - MGP_WSBEiJ_P0036351 Pitx1 protein_coding protein_coding MGP_WSBEiJ_T0036352.1 MGP_WSBEiJ_G0019937.1 mouse_genomes_project 13 54816054 54824927 - MGP_WSBEiJ_P0036352 Pitx1 protein_coding protein_coding MGP_WSBEiJ_T0036534.1 MGP_WSBEiJ_G0019996.1 mouse_genomes_project 13 63585933 63617452 - MGP_WSBEiJ_P0036534 Hsd17b3 protein_coding protein_coding MGP_WSBEiJ_T0036535.1 MGP_WSBEiJ_G0019996.1 mouse_genomes_project 13 63585933 63617467 - MGP_WSBEiJ_P0036535 Hsd17b3 protein_coding protein_coding MGP_WSBEiJ_T0036463.1 MGP_WSBEiJ_G0019966.1 mouse_genomes_project 13 58954585 58960997 - MGP_WSBEiJ_P0036463 Spata31d1a protein_coding protein_coding MGP_WSBEiJ_T0035602.1 MGP_WSBEiJ_G0019644.1 mouse_genomes_project 13 19124839 19132405 - MGP_WSBEiJ_P0035602 Prss16 protein_coding protein_coding MGP_WSBEiJ_T0035603.1 MGP_WSBEiJ_G0019644.1 mouse_genomes_project 13 19125223 19127886 - Prss16 protein_coding processed_transcript MGP_WSBEiJ_T0035604.1 MGP_WSBEiJ_G0019644.1 mouse_genomes_project 13 19125589 19129079 - Prss16 protein_coding processed_transcript MGP_WSBEiJ_T0035605.1 MGP_WSBEiJ_G0019644.1 mouse_genomes_project 13 19129895 19132406 - Prss16 protein_coding processed_transcript MGP_WSBEiJ_T0002444.1 MGP_WSBEiJ_G0002360.1 mouse_genomes_project 13 16321770 16329972 + MGP_WSBEiJ_P0002444 Tcrg-C4 TR_C_gene TR_C_gene MGP_WSBEiJ_T0012662.1 MGP_WSBEiJ_G0010792.1 mouse_genomes_project 13 80136628 80137782 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009762.1 MGP_WSBEiJ_G0007919.1 mouse_genomes_project 13 18504524 18504605 + Mir1896 miRNA miRNA MGP_WSBEiJ_T0037060.1 MGP_WSBEiJ_G0020186.1 mouse_genomes_project 13 99223373 99226019 - MGP_WSBEiJ_P0037060 Gm10320 protein_coding protein_coding MGP_WSBEiJ_T0036654.1 MGP_WSBEiJ_G0020059.1 mouse_genomes_project 13 70531121 70648508 - MGP_WSBEiJ_P0036654 Adamts16 protein_coding protein_coding MGP_WSBEiJ_T0036655.1 MGP_WSBEiJ_G0020059.1 mouse_genomes_project 13 70531129 70648472 - MGP_WSBEiJ_P0036655 Adamts16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036656.1 MGP_WSBEiJ_G0020059.1 mouse_genomes_project 13 70564615 70648508 - MGP_WSBEiJ_P0036656 Adamts16 protein_coding protein_coding MGP_WSBEiJ_T0036657.1 MGP_WSBEiJ_G0020059.1 mouse_genomes_project 13 70640545 70648505 - Adamts16 protein_coding retained_intron MGP_WSBEiJ_T0035860.1 MGP_WSBEiJ_G0019774.1 mouse_genomes_project 13 32050651 32052820 - MGP_WSBEiJ_P0035860 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036668.1 MGP_WSBEiJ_G0020065.1 mouse_genomes_project 13 73230071 73238720 - MGP_WSBEiJ_P0036668 Ndufs6 protein_coding protein_coding MGP_WSBEiJ_T0036669.1 MGP_WSBEiJ_G0020065.1 mouse_genomes_project 13 73230076 73238630 - MGP_WSBEiJ_P0036669 Ndufs6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035555.1 MGP_WSBEiJ_G0019614.1 mouse_genomes_project 13 18478982 18500271 - MGP_WSBEiJ_P0035555 protein_coding protein_coding MGP_WSBEiJ_T0035556.1 MGP_WSBEiJ_G0019614.1 mouse_genomes_project 13 18478985 18500080 - MGP_WSBEiJ_P0035556 protein_coding protein_coding MGP_WSBEiJ_T0035557.1 MGP_WSBEiJ_G0019614.1 mouse_genomes_project 13 18479557 18500414 - MGP_WSBEiJ_P0035557 protein_coding protein_coding MGP_WSBEiJ_T0035558.1 MGP_WSBEiJ_G0019614.1 mouse_genomes_project 13 18479557 18500428 - MGP_WSBEiJ_P0035558 protein_coding protein_coding MGP_WSBEiJ_T0035559.1 MGP_WSBEiJ_G0019614.1 mouse_genomes_project 13 18480899 18500080 - MGP_WSBEiJ_P0035559 protein_coding protein_coding MGP_WSBEiJ_T0037010.1 MGP_WSBEiJ_G0020169.1 mouse_genomes_project 13 97111459 97176926 - MGP_WSBEiJ_P0037010 Polk protein_coding protein_coding MGP_WSBEiJ_T0037011.1 MGP_WSBEiJ_G0020169.1 mouse_genomes_project 13 97112994 97151464 - MGP_WSBEiJ_P0037011 Polk protein_coding protein_coding MGP_WSBEiJ_T0036774.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81177263 81730776 - MGP_WSBEiJ_P0036774 Adgrv1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036775.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81177263 81694364 - MGP_WSBEiJ_P0036775 Adgrv1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036776.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81177271 81437395 - MGP_WSBEiJ_P0036776 Adgrv1 protein_coding protein_coding MGP_WSBEiJ_T0036777.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81177271 81730903 - MGP_WSBEiJ_P0036777 Adgrv1 protein_coding protein_coding MGP_WSBEiJ_T0036778.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81177272 81543294 - MGP_WSBEiJ_P0036778 Adgrv1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036779.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81189142 81436916 - Adgrv1 protein_coding processed_transcript MGP_WSBEiJ_T0036780.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81604000 81672361 - MGP_WSBEiJ_P0036780 Adgrv1 protein_coding protein_coding MGP_WSBEiJ_T0036781.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81604001 81686660 - Adgrv1 protein_coding retained_intron MGP_WSBEiJ_T0036782.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81604001 81632758 - Adgrv1 protein_coding retained_intron MGP_WSBEiJ_T0036783.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81641650 81644683 - Adgrv1 protein_coding retained_intron MGP_WSBEiJ_T0036784.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81658009 81660308 - Adgrv1 protein_coding retained_intron MGP_WSBEiJ_T0036785.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81661768 81730888 - MGP_WSBEiJ_P0036785 Adgrv1 protein_coding protein_coding MGP_WSBEiJ_T0036786.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81679187 81730888 - MGP_WSBEiJ_P0036786 Adgrv1 protein_coding protein_coding MGP_WSBEiJ_T0036787.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81680802 81730890 - MGP_WSBEiJ_P0036787 Adgrv1 protein_coding protein_coding MGP_WSBEiJ_T0036788.1 MGP_WSBEiJ_G0020107.1 mouse_genomes_project 13 81683102 81685885 - Adgrv1 protein_coding retained_intron MGP_WSBEiJ_T0036680.1 MGP_WSBEiJ_G0020071.1 mouse_genomes_project 13 73587666 73606510 - MGP_WSBEiJ_P0036680 Slc6a18 protein_coding protein_coding MGP_WSBEiJ_T0036681.1 MGP_WSBEiJ_G0020071.1 mouse_genomes_project 13 73590025 73606419 - MGP_WSBEiJ_P0036681 Slc6a18 protein_coding protein_coding MGP_WSBEiJ_T0037362.1 MGP_WSBEiJ_G0020286.1 mouse_genomes_project 13 121144877 121176424 + MGP_WSBEiJ_P0037362 Paip1 protein_coding protein_coding MGP_WSBEiJ_T0037363.1 MGP_WSBEiJ_G0020286.1 mouse_genomes_project 13 121145197 121177251 + MGP_WSBEiJ_P0037363 Paip1 protein_coding protein_coding MGP_WSBEiJ_T0037364.1 MGP_WSBEiJ_G0020286.1 mouse_genomes_project 13 121145400 121176366 + MGP_WSBEiJ_P0037364 Paip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037365.1 MGP_WSBEiJ_G0020286.1 mouse_genomes_project 13 121145414 121176390 + MGP_WSBEiJ_P0037365 Paip1 protein_coding protein_coding MGP_WSBEiJ_T0037366.1 MGP_WSBEiJ_G0020286.1 mouse_genomes_project 13 121145414 121176366 + MGP_WSBEiJ_P0037366 Paip1 protein_coding protein_coding MGP_WSBEiJ_T0037367.1 MGP_WSBEiJ_G0020286.1 mouse_genomes_project 13 121145439 121169262 + MGP_WSBEiJ_P0037367 Paip1 protein_coding protein_coding MGP_WSBEiJ_T0037368.1 MGP_WSBEiJ_G0020286.1 mouse_genomes_project 13 121157903 121176325 + MGP_WSBEiJ_P0037368 Paip1 protein_coding protein_coding MGP_WSBEiJ_T0037369.1 MGP_WSBEiJ_G0020286.1 mouse_genomes_project 13 121168751 121170274 + Paip1 protein_coding retained_intron MGP_WSBEiJ_T0037349.1 MGP_WSBEiJ_G0020280.1 mouse_genomes_project 13 118834939 118889404 + MGP_WSBEiJ_P0037349 Emb protein_coding protein_coding MGP_WSBEiJ_T0100556.1 MGP_WSBEiJ_G0039014.1 mouse_genomes_project 13 31425816 31443797 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036971.1 MGP_WSBEiJ_G0020156.1 mouse_genomes_project 13 95538595 95577483 + MGP_WSBEiJ_P0036971 Wdr41 protein_coding protein_coding MGP_WSBEiJ_T0036972.1 MGP_WSBEiJ_G0020156.1 mouse_genomes_project 13 95538599 95586215 + MGP_WSBEiJ_P0036972 Wdr41 protein_coding protein_coding MGP_WSBEiJ_T0036973.1 MGP_WSBEiJ_G0020156.1 mouse_genomes_project 13 95538599 95586216 + MGP_WSBEiJ_P0036973 Wdr41 protein_coding protein_coding MGP_WSBEiJ_T0036974.1 MGP_WSBEiJ_G0020156.1 mouse_genomes_project 13 95538689 95577429 + MGP_WSBEiJ_P0036974 Wdr41 protein_coding protein_coding MGP_WSBEiJ_T0036975.1 MGP_WSBEiJ_G0020156.1 mouse_genomes_project 13 95538689 95577429 + MGP_WSBEiJ_P0036975 Wdr41 protein_coding protein_coding MGP_WSBEiJ_T0036976.1 MGP_WSBEiJ_G0020156.1 mouse_genomes_project 13 95538790 95559429 + MGP_WSBEiJ_P0036976 Wdr41 protein_coding protein_coding MGP_WSBEiJ_T0036482.1 MGP_WSBEiJ_G0019981.1 mouse_genomes_project 13 60306401 60312034 - MGP_WSBEiJ_P0036482 Ctsj protein_coding protein_coding MGP_WSBEiJ_T0100545.1 MGP_WSBEiJ_G0039003.1 mouse_genomes_project 13 20278753 20279679 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036064.1 MGP_WSBEiJ_G0019853.1 mouse_genomes_project 13 47360100 47431151 - MGP_WSBEiJ_P0036064 Phf2 protein_coding protein_coding MGP_WSBEiJ_T0035806.1 MGP_WSBEiJ_G0019753.1 mouse_genomes_project 13 29281740 29284392 + MGP_WSBEiJ_P0035806 Foxq1 protein_coding protein_coding MGP_WSBEiJ_T0036744.1 MGP_WSBEiJ_G0020099.1 mouse_genomes_project 13 76099940 76206322 + MGP_WSBEiJ_P0036744 Ttc37 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000868.1 MGP_WSBEiJ_G0000806.1 mouse_genomes_project 13 102365602 102366086 - TEC TEC MGP_WSBEiJ_T0006440.1 MGP_WSBEiJ_G0005347.1 mouse_genomes_project 13 29087639 29121372 - Gm11375 lincRNA lincRNA MGP_WSBEiJ_T0006441.1 MGP_WSBEiJ_G0005347.1 mouse_genomes_project 13 29119857 29121414 - Gm11375 lincRNA lincRNA MGP_WSBEiJ_T0003369.1 MGP_WSBEiJ_G0003096.1 mouse_genomes_project 13 22253339 22261841 + 4932702P03Rik antisense antisense MGP_WSBEiJ_T0003370.1 MGP_WSBEiJ_G0003096.1 mouse_genomes_project 13 22253342 22254990 + 4932702P03Rik antisense antisense MGP_WSBEiJ_T0036132.1 MGP_WSBEiJ_G0019877.1 mouse_genomes_project 13 50347089 50378739 + MGP_WSBEiJ_P0036132 Secisbp2 protein_coding protein_coding MGP_WSBEiJ_T0036133.1 MGP_WSBEiJ_G0019877.1 mouse_genomes_project 13 50347133 50361400 + MGP_WSBEiJ_P0036133 Secisbp2 protein_coding protein_coding MGP_WSBEiJ_T0036134.1 MGP_WSBEiJ_G0019877.1 mouse_genomes_project 13 50347189 50352355 + Secisbp2 protein_coding processed_transcript MGP_WSBEiJ_T0036135.1 MGP_WSBEiJ_G0019877.1 mouse_genomes_project 13 50347189 50360489 + Secisbp2 protein_coding processed_transcript MGP_WSBEiJ_T0036136.1 MGP_WSBEiJ_G0019877.1 mouse_genomes_project 13 50374427 50377224 + Secisbp2 protein_coding retained_intron MGP_WSBEiJ_T0036137.1 MGP_WSBEiJ_G0019877.1 mouse_genomes_project 13 50376467 50378184 + Secisbp2 protein_coding retained_intron MGP_WSBEiJ_T0009777.1 MGP_WSBEiJ_G0007934.1 mouse_genomes_project 13 47076120 47076209 - Mirlet7f-1 miRNA miRNA MGP_WSBEiJ_T0097802.1 MGP_WSBEiJ_G0036465.1 mouse_genomes_project 13 27825535 27825720 - Gm23206 snRNA snRNA MGP_WSBEiJ_T0037227.1 MGP_WSBEiJ_G0020238.1 mouse_genomes_project 13 109209504 109212217 + MGP_WSBEiJ_P0037227 Smim15 protein_coding protein_coding MGP_WSBEiJ_T0016769.1 MGP_WSBEiJ_G0014677.1 mouse_genomes_project 13 109494723 109498764 - Gm2822 processed_transcript processed_transcript MGP_WSBEiJ_T0012678.1 MGP_WSBEiJ_G0010808.1 mouse_genomes_project 13 112654906 112655150 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036034.1 MGP_WSBEiJ_G0019844.1 mouse_genomes_project 13 45455503 45474514 - MGP_WSBEiJ_P0036034 Tpmt protein_coding protein_coding MGP_WSBEiJ_T0036035.1 MGP_WSBEiJ_G0019844.1 mouse_genomes_project 13 45455512 45474428 - MGP_WSBEiJ_P0036035 Tpmt protein_coding protein_coding MGP_WSBEiJ_T0036036.1 MGP_WSBEiJ_G0019844.1 mouse_genomes_project 13 45455701 45475968 - MGP_WSBEiJ_P0036036 Tpmt protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036037.1 MGP_WSBEiJ_G0019844.1 mouse_genomes_project 13 45459194 45474647 - MGP_WSBEiJ_P0036037 Tpmt protein_coding protein_coding MGP_WSBEiJ_T0036038.1 MGP_WSBEiJ_G0019844.1 mouse_genomes_project 13 45459213 45476041 - MGP_WSBEiJ_P0036038 Tpmt protein_coding protein_coding MGP_WSBEiJ_T0036039.1 MGP_WSBEiJ_G0019844.1 mouse_genomes_project 13 45471000 45474448 - Tpmt protein_coding retained_intron MGP_WSBEiJ_T0036040.1 MGP_WSBEiJ_G0019844.1 mouse_genomes_project 13 45471416 45474442 - MGP_WSBEiJ_P0036040 Tpmt protein_coding protein_coding MGP_WSBEiJ_T0100547.1 MGP_WSBEiJ_G0039005.1 mouse_genomes_project 13 21024565 21026124 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097817.1 MGP_WSBEiJ_G0036480.1 mouse_genomes_project 13 63830518 63830606 - Gm25654 snRNA snRNA MGP_WSBEiJ_T0036698.1 MGP_WSBEiJ_G0020079.1 mouse_genomes_project 13 73960517 73983838 + Tppp protein_coding processed_transcript MGP_WSBEiJ_T0036699.1 MGP_WSBEiJ_G0020079.1 mouse_genomes_project 13 73960529 73988220 + MGP_WSBEiJ_P0036699 Tppp protein_coding protein_coding MGP_WSBEiJ_T0036700.1 MGP_WSBEiJ_G0020079.1 mouse_genomes_project 13 73960543 73973875 + Tppp protein_coding retained_intron MGP_WSBEiJ_T0036701.1 MGP_WSBEiJ_G0020079.1 mouse_genomes_project 13 73983209 73986066 + Tppp protein_coding processed_transcript MGP_WSBEiJ_T0100552.1 MGP_WSBEiJ_G0039010.1 mouse_genomes_project 13 30651602 30654810 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036550.1 MGP_WSBEiJ_G0020005.1 mouse_genomes_project 13 64279366 64448243 - MGP_WSBEiJ_P0036550 Cntnap3 protein_coding protein_coding MGP_WSBEiJ_T0035572.1 MGP_WSBEiJ_G0019623.1 mouse_genomes_project 13 18639753 18648789 - MGP_WSBEiJ_P0035572 Olfr1364 protein_coding protein_coding MGP_WSBEiJ_T0035573.1 MGP_WSBEiJ_G0019623.1 mouse_genomes_project 13 18639753 18640698 - MGP_WSBEiJ_P0035573 Olfr1364 protein_coding protein_coding MGP_WSBEiJ_T0035477.1 MGP_WSBEiJ_G0019584.1 mouse_genomes_project 13 10889958 10901109 - MGP_WSBEiJ_P0035477 Ggps1 protein_coding protein_coding MGP_WSBEiJ_T0003368.1 MGP_WSBEiJ_G0003095.1 mouse_genomes_project 13 22078223 22083479 + 1700016G14Rik antisense antisense MGP_WSBEiJ_T0012630.1 MGP_WSBEiJ_G0010760.1 mouse_genomes_project 13 31449371 31449718 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036745.1 MGP_WSBEiJ_G0020100.1 mouse_genomes_project 13 76398996 77051167 + MGP_WSBEiJ_P0036745 Mctp1 protein_coding protein_coding MGP_WSBEiJ_T0036746.1 MGP_WSBEiJ_G0020100.1 mouse_genomes_project 13 76593510 76774823 + MGP_WSBEiJ_P0036746 Mctp1 protein_coding protein_coding MGP_WSBEiJ_T0036747.1 MGP_WSBEiJ_G0020100.1 mouse_genomes_project 13 76593564 76744352 + MGP_WSBEiJ_P0036747 Mctp1 protein_coding protein_coding MGP_WSBEiJ_T0036748.1 MGP_WSBEiJ_G0020100.1 mouse_genomes_project 13 76593597 77052610 + MGP_WSBEiJ_P0036748 Mctp1 protein_coding protein_coding MGP_WSBEiJ_T0036749.1 MGP_WSBEiJ_G0020100.1 mouse_genomes_project 13 76734173 76840279 + Mctp1 protein_coding retained_intron MGP_WSBEiJ_T0036750.1 MGP_WSBEiJ_G0020100.1 mouse_genomes_project 13 76836651 76839520 + Mctp1 protein_coding retained_intron MGP_WSBEiJ_T0036751.1 MGP_WSBEiJ_G0020100.1 mouse_genomes_project 13 76836890 77050105 + Mctp1 protein_coding retained_intron MGP_WSBEiJ_T0036752.1 MGP_WSBEiJ_G0020100.1 mouse_genomes_project 13 76836927 76839722 + Mctp1 protein_coding retained_intron MGP_WSBEiJ_T0006469.1 MGP_WSBEiJ_G0005368.1 mouse_genomes_project 13 47073814 47076114 - 6720427I07Rik lincRNA lincRNA MGP_WSBEiJ_T0003383.1 MGP_WSBEiJ_G0003107.1 mouse_genomes_project 13 53668660 53674175 - Gm16249 antisense antisense MGP_WSBEiJ_T0097822.1 MGP_WSBEiJ_G0036485.1 mouse_genomes_project 13 96504983 96505142 - Gm24032 snRNA snRNA MGP_WSBEiJ_T0035352.1 MGP_WSBEiJ_G0019549.1 mouse_genomes_project 13 990998 1027364 - MGP_WSBEiJ_P0035352 Akr1c20 protein_coding protein_coding MGP_WSBEiJ_T0035353.1 MGP_WSBEiJ_G0019549.1 mouse_genomes_project 13 1011250 1027379 - MGP_WSBEiJ_P0035353 Akr1c20 protein_coding protein_coding MGP_WSBEiJ_T0035584.1 MGP_WSBEiJ_G0019632.1 mouse_genomes_project 13 18803316 18804060 + MGP_WSBEiJ_P0035584 Hist1h4j protein_coding protein_coding MGP_WSBEiJ_T0035832.1 MGP_WSBEiJ_G0019767.1 mouse_genomes_project 13 31577277 31588843 + MGP_WSBEiJ_P0035832 Serpinb6d protein_coding protein_coding MGP_WSBEiJ_T0035581.1 MGP_WSBEiJ_G0019630.1 mouse_genomes_project 13 18787810 18916026 + MGP_WSBEiJ_P0035581 Hist1h2bq protein_coding protein_coding MGP_WSBEiJ_T0035582.1 MGP_WSBEiJ_G0019630.1 mouse_genomes_project 13 18787810 18916226 + MGP_WSBEiJ_P0035582 Hist1h2bq protein_coding protein_coding MGP_WSBEiJ_T0035987.1 MGP_WSBEiJ_G0019826.1 mouse_genomes_project 13 41661047 41742713 - MGP_WSBEiJ_P0035987 Ranbp9 protein_coding protein_coding MGP_WSBEiJ_T0016765.1 MGP_WSBEiJ_G0014674.1 mouse_genomes_project 13 69376181 69380587 - Gm17108 processed_transcript processed_transcript MGP_WSBEiJ_T0036342.1 MGP_WSBEiJ_G0019932.1 mouse_genomes_project 13 54604124 54657293 + MGP_WSBEiJ_P0036342 Ddx46 protein_coding protein_coding MGP_WSBEiJ_T0036343.1 MGP_WSBEiJ_G0019932.1 mouse_genomes_project 13 54604124 54657293 + MGP_WSBEiJ_P0036343 Ddx46 protein_coding protein_coding MGP_WSBEiJ_T0036344.1 MGP_WSBEiJ_G0019932.1 mouse_genomes_project 13 54604276 54657301 + MGP_WSBEiJ_P0036344 Ddx46 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035985.1 MGP_WSBEiJ_G0019824.1 mouse_genomes_project 13 41629192 41654118 + MGP_WSBEiJ_P0035985 Sirt5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036559.1 MGP_WSBEiJ_G0020011.1 mouse_genomes_project 13 64670973 64671900 + MGP_WSBEiJ_P0036559 Olfr466 protein_coding protein_coding MGP_WSBEiJ_T0006532.1 MGP_WSBEiJ_G0005410.1 mouse_genomes_project 13 101754715 101890664 + Gm29502 lincRNA lincRNA MGP_WSBEiJ_T0035486.1 MGP_WSBEiJ_G0019586.1 mouse_genomes_project 13 11071896 11378275 - MGP_WSBEiJ_P0035486 Hecw1 protein_coding protein_coding MGP_WSBEiJ_T0036379.1 MGP_WSBEiJ_G0019949.1 mouse_genomes_project 13 55812979 55939184 - MGP_WSBEiJ_P0036379 Trpc7 protein_coding protein_coding MGP_WSBEiJ_T0036380.1 MGP_WSBEiJ_G0019949.1 mouse_genomes_project 13 55812979 55939223 - MGP_WSBEiJ_P0036380 Trpc7 protein_coding protein_coding MGP_WSBEiJ_T0036381.1 MGP_WSBEiJ_G0019949.1 mouse_genomes_project 13 55813134 55939236 - MGP_WSBEiJ_P0036381 Trpc7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036382.1 MGP_WSBEiJ_G0019949.1 mouse_genomes_project 13 55813632 55938941 - MGP_WSBEiJ_P0036382 Trpc7 protein_coding protein_coding MGP_WSBEiJ_T0036383.1 MGP_WSBEiJ_G0019949.1 mouse_genomes_project 13 55813632 55938941 - MGP_WSBEiJ_P0036383 Trpc7 protein_coding protein_coding MGP_WSBEiJ_T0036384.1 MGP_WSBEiJ_G0019949.1 mouse_genomes_project 13 55813632 55938941 - MGP_WSBEiJ_P0036384 Trpc7 protein_coding protein_coding MGP_WSBEiJ_T0036385.1 MGP_WSBEiJ_G0019949.1 mouse_genomes_project 13 55813632 55938941 - MGP_WSBEiJ_P0036385 Trpc7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036386.1 MGP_WSBEiJ_G0019949.1 mouse_genomes_project 13 55813632 55938941 - MGP_WSBEiJ_P0036386 Trpc7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037073.1 MGP_WSBEiJ_G0020193.1 mouse_genomes_project 13 100087980 100112681 - MGP_WSBEiJ_P0037073 Ptcd2 protein_coding protein_coding MGP_WSBEiJ_T0035630.1 MGP_WSBEiJ_G0019669.1 mouse_genomes_project 13 20384142 20385499 + MGP_WSBEiJ_P0035630 Vmn1r219 protein_coding protein_coding MGP_WSBEiJ_T0035668.1 MGP_WSBEiJ_G0019697.1 mouse_genomes_project 13 21107266 21123678 + Slc17a2 protein_coding retained_intron MGP_WSBEiJ_T0035669.1 MGP_WSBEiJ_G0019697.1 mouse_genomes_project 13 21107300 21125456 + MGP_WSBEiJ_P0035669 Slc17a2 protein_coding protein_coding MGP_WSBEiJ_T0035670.1 MGP_WSBEiJ_G0019697.1 mouse_genomes_project 13 21107318 21123449 + Slc17a2 protein_coding retained_intron MGP_WSBEiJ_T0035671.1 MGP_WSBEiJ_G0019697.1 mouse_genomes_project 13 21107321 21123030 + MGP_WSBEiJ_P0035671 Slc17a2 protein_coding protein_coding MGP_WSBEiJ_T0037268.1 MGP_WSBEiJ_G0020246.1 mouse_genomes_project 13 111636022 111642933 + MGP_WSBEiJ_P0037268 Plk2 protein_coding protein_coding MGP_WSBEiJ_T0016767.1 MGP_WSBEiJ_G0014676.1 mouse_genomes_project 13 90101690 90214710 + Gm4117 processed_transcript processed_transcript MGP_WSBEiJ_T0016768.1 MGP_WSBEiJ_G0014676.1 mouse_genomes_project 13 90101694 90260792 + Gm4117 processed_transcript processed_transcript MGP_WSBEiJ_T0012618.1 MGP_WSBEiJ_G0010748.1 mouse_genomes_project 13 24289830 24290136 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035859.1 MGP_WSBEiJ_G0019773.1 mouse_genomes_project 13 31953661 31990062 + MGP_WSBEiJ_P0035859 Bphl protein_coding protein_coding MGP_WSBEiJ_T0036948.1 MGP_WSBEiJ_G0020145.1 mouse_genomes_project 13 93905672 93980991 - MGP_WSBEiJ_P0036948 Jmy protein_coding protein_coding MGP_WSBEiJ_T0035771.1 MGP_WSBEiJ_G0019737.1 mouse_genomes_project 13 25327852 25339922 + MGP_WSBEiJ_P0035771 protein_coding protein_coding MGP_WSBEiJ_T0100534.1 MGP_WSBEiJ_G0038992.1 mouse_genomes_project 13 19636698 19637063 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0037216.1 MGP_WSBEiJ_G0020234.1 mouse_genomes_project 13 108047793 108060861 + MGP_WSBEiJ_P0037216 Dimt1 protein_coding protein_coding MGP_WSBEiJ_T0037326.1 MGP_WSBEiJ_G0020270.1 mouse_genomes_project 13 115219100 115598493 + MGP_WSBEiJ_P0037326 Arl15 protein_coding protein_coding MGP_WSBEiJ_T0037182.1 MGP_WSBEiJ_G0020222.1 mouse_genomes_project 13 105185927 105210894 + MGP_WSBEiJ_P0037182 Trim23 protein_coding protein_coding MGP_WSBEiJ_T0037183.1 MGP_WSBEiJ_G0020222.1 mouse_genomes_project 13 105185969 105211249 + MGP_WSBEiJ_P0037183 Trim23 protein_coding protein_coding MGP_WSBEiJ_T0037184.1 MGP_WSBEiJ_G0020222.1 mouse_genomes_project 13 105185991 105196844 + MGP_WSBEiJ_P0037184 Trim23 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037185.1 MGP_WSBEiJ_G0020222.1 mouse_genomes_project 13 105186228 105209926 + MGP_WSBEiJ_P0037185 Trim23 protein_coding protein_coding MGP_WSBEiJ_T0035515.1 MGP_WSBEiJ_G0019598.1 mouse_genomes_project 13 16334876 16345014 - Stard3nl protein_coding retained_intron MGP_WSBEiJ_T0035516.1 MGP_WSBEiJ_G0019598.1 mouse_genomes_project 13 16334879 16336329 - Stard3nl protein_coding retained_intron MGP_WSBEiJ_T0035517.1 MGP_WSBEiJ_G0019598.1 mouse_genomes_project 13 16334879 16374271 - MGP_WSBEiJ_P0035517 Stard3nl protein_coding protein_coding MGP_WSBEiJ_T0035518.1 MGP_WSBEiJ_G0019598.1 mouse_genomes_project 13 16335204 16347419 - Stard3nl protein_coding retained_intron MGP_WSBEiJ_T0035519.1 MGP_WSBEiJ_G0019598.1 mouse_genomes_project 13 16342013 16374258 - MGP_WSBEiJ_P0035519 Stard3nl protein_coding protein_coding MGP_WSBEiJ_T0035520.1 MGP_WSBEiJ_G0019598.1 mouse_genomes_project 13 16346457 16374319 - Stard3nl protein_coding retained_intron MGP_WSBEiJ_T0035521.1 MGP_WSBEiJ_G0019598.1 mouse_genomes_project 13 16347374 16354598 - Stard3nl protein_coding retained_intron MGP_WSBEiJ_T0035522.1 MGP_WSBEiJ_G0019598.1 mouse_genomes_project 13 16354524 16374283 - MGP_WSBEiJ_P0035522 Stard3nl protein_coding protein_coding MGP_WSBEiJ_T0003367.1 MGP_WSBEiJ_G0003094.1 mouse_genomes_project 13 21263072 21272471 + Gm11339 antisense antisense MGP_WSBEiJ_T0035955.1 MGP_WSBEiJ_G0019814.1 mouse_genomes_project 13 39432107 39432282 - MGP_WSBEiJ_P0035955 Gm17364 protein_coding protein_coding MGP_WSBEiJ_T0006433.1 MGP_WSBEiJ_G0005341.1 mouse_genomes_project 13 28307446 28316990 + 4930519D14Rik lincRNA lincRNA MGP_WSBEiJ_T0097282.1 MGP_WSBEiJ_G0035959.1 mouse_genomes_project 13 41246457 41254355 + Gm15809 sense_intronic sense_intronic MGP_WSBEiJ_T0036697.1 MGP_WSBEiJ_G0020078.1 mouse_genomes_project 13 73940265 73940451 - MGP_WSBEiJ_P0036697 Gm10126 protein_coding protein_coding MGP_WSBEiJ_T0036471.1 MGP_WSBEiJ_G0019972.1 mouse_genomes_project 13 59459851 59462812 - MGP_WSBEiJ_P0036471 Gas1 protein_coding protein_coding MGP_WSBEiJ_T0003372.1 MGP_WSBEiJ_G0003098.1 mouse_genomes_project 13 29523619 29526663 + Gm11379 antisense antisense MGP_WSBEiJ_T0012640.1 MGP_WSBEiJ_G0010770.1 mouse_genomes_project 13 63468579 63469223 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0002546.1 MGP_WSBEiJ_G0002452.1 mouse_genomes_project 13 16126423 16126871 + MGP_WSBEiJ_P0002546 Tcrg-V5 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002547.1 MGP_WSBEiJ_G0002452.1 mouse_genomes_project 13 16126578 16126871 + MGP_WSBEiJ_P0002547 Tcrg-V5 TR_V_gene TR_V_gene MGP_WSBEiJ_T0003377.1 MGP_WSBEiJ_G0003101.1 mouse_genomes_project 13 39981898 39982899 + 1700061E18Rik antisense antisense MGP_WSBEiJ_T0035887.1 MGP_WSBEiJ_G0019784.1 mouse_genomes_project 13 33596932 33821896 + MGP_WSBEiJ_P0035887 Cdyl protein_coding protein_coding MGP_WSBEiJ_T0035888.1 MGP_WSBEiJ_G0019784.1 mouse_genomes_project 13 33685980 33821890 + MGP_WSBEiJ_P0035888 Cdyl protein_coding protein_coding MGP_WSBEiJ_T0035680.1 MGP_WSBEiJ_G0019703.1 mouse_genomes_project 13 21259701 21298274 - MGP_WSBEiJ_P0035680 Scgn protein_coding protein_coding MGP_WSBEiJ_T0035681.1 MGP_WSBEiJ_G0019703.1 mouse_genomes_project 13 21268418 21273472 - Scgn protein_coding processed_transcript MGP_WSBEiJ_T0100537.1 MGP_WSBEiJ_G0038995.1 mouse_genomes_project 13 20022003 20023043 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006539.1 MGP_WSBEiJ_G0005416.1 mouse_genomes_project 13 113177700 113179985 - Gm15325 lincRNA lincRNA MGP_WSBEiJ_T0035984.1 MGP_WSBEiJ_G0019823.1 mouse_genomes_project 13 41461796 41565314 - MGP_WSBEiJ_P0035984 Gfod1 protein_coding protein_coding MGP_WSBEiJ_T0009757.1 MGP_WSBEiJ_G0007914.1 mouse_genomes_project 13 3652660 3652770 - Gm22689 miRNA miRNA MGP_WSBEiJ_T0035765.1 MGP_WSBEiJ_G0019733.1 mouse_genomes_project 13 25092288 25104798 - MGP_WSBEiJ_P0035765 Prl7a1 protein_coding protein_coding MGP_WSBEiJ_T0035766.1 MGP_WSBEiJ_G0019733.1 mouse_genomes_project 13 25092288 25104788 - MGP_WSBEiJ_P0035766 Prl7a1 protein_coding protein_coding MGP_WSBEiJ_T0036372.1 MGP_WSBEiJ_G0019947.1 mouse_genomes_project 13 55640891 55674483 + MGP_WSBEiJ_P0036372 Tgfbi protein_coding protein_coding MGP_WSBEiJ_T0003406.1 MGP_WSBEiJ_G0003120.1 mouse_genomes_project 13 78175462 78217911 + antisense antisense MGP_WSBEiJ_T0003407.1 MGP_WSBEiJ_G0003120.1 mouse_genomes_project 13 78177897 78212692 + antisense antisense MGP_WSBEiJ_T0003408.1 MGP_WSBEiJ_G0003120.1 mouse_genomes_project 13 78182587 78216916 + antisense antisense MGP_WSBEiJ_T0003409.1 MGP_WSBEiJ_G0003120.1 mouse_genomes_project 13 78182977 78218742 + antisense antisense MGP_WSBEiJ_T0003410.1 MGP_WSBEiJ_G0003120.1 mouse_genomes_project 13 78183179 78212100 + antisense antisense MGP_WSBEiJ_T0003411.1 MGP_WSBEiJ_G0003120.1 mouse_genomes_project 13 78183413 78259066 + antisense antisense MGP_WSBEiJ_T0012651.1 MGP_WSBEiJ_G0010781.1 mouse_genomes_project 13 69544242 69544530 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099069.1 MGP_WSBEiJ_G0037732.1 mouse_genomes_project 13 95906717 95906855 + Snora47 snoRNA snoRNA MGP_WSBEiJ_T0037300.1 MGP_WSBEiJ_G0020254.1 mouse_genomes_project 13 113963338 114019292 - MGP_WSBEiJ_P0037300 Ddx4 protein_coding protein_coding MGP_WSBEiJ_T0037301.1 MGP_WSBEiJ_G0020254.1 mouse_genomes_project 13 113963338 114019292 - MGP_WSBEiJ_P0037301 Ddx4 protein_coding protein_coding MGP_WSBEiJ_T0037370.1 MGP_WSBEiJ_G0020287.1 mouse_genomes_project 13 121181790 121207771 + MGP_WSBEiJ_P0037370 4833420G17Rik protein_coding protein_coding MGP_WSBEiJ_T0016743.1 MGP_WSBEiJ_G0014661.1 mouse_genomes_project 13 12295248 12316907 - Gm6556 processed_transcript antisense MGP_WSBEiJ_T0016744.1 MGP_WSBEiJ_G0014661.1 mouse_genomes_project 13 12316053 12317958 - Gm6556 processed_transcript TEC MGP_WSBEiJ_T0037004.1 MGP_WSBEiJ_G0020168.1 mouse_genomes_project 13 97041078 97061509 - Ankdd1b protein_coding processed_transcript MGP_WSBEiJ_T0037005.1 MGP_WSBEiJ_G0020168.1 mouse_genomes_project 13 97041390 97100682 - MGP_WSBEiJ_P0037005 Ankdd1b protein_coding protein_coding MGP_WSBEiJ_T0037006.1 MGP_WSBEiJ_G0020168.1 mouse_genomes_project 13 97041701 97060870 - Ankdd1b protein_coding retained_intron MGP_WSBEiJ_T0037007.1 MGP_WSBEiJ_G0020168.1 mouse_genomes_project 13 97042038 97060836 - MGP_WSBEiJ_P0037007 Ankdd1b protein_coding protein_coding MGP_WSBEiJ_T0037008.1 MGP_WSBEiJ_G0020168.1 mouse_genomes_project 13 97060827 97072344 - Ankdd1b protein_coding retained_intron MGP_WSBEiJ_T0037009.1 MGP_WSBEiJ_G0020168.1 mouse_genomes_project 13 97070666 97100720 - MGP_WSBEiJ_P0037009 Ankdd1b protein_coding protein_coding MGP_WSBEiJ_T0000861.1 MGP_WSBEiJ_G0000799.1 mouse_genomes_project 13 90628893 90632754 + TEC TEC MGP_WSBEiJ_T0035667.1 MGP_WSBEiJ_G0019696.1 mouse_genomes_project 13 21082987 21091912 + MGP_WSBEiJ_P0035667 Trim38 protein_coding protein_coding MGP_WSBEiJ_T0035920.1 MGP_WSBEiJ_G0019797.1 mouse_genomes_project 13 36225084 36248613 + MGP_WSBEiJ_P0035920 Snrnp48 protein_coding protein_coding MGP_WSBEiJ_T0035921.1 MGP_WSBEiJ_G0019797.1 mouse_genomes_project 13 36225096 36247872 + MGP_WSBEiJ_P0035921 Snrnp48 protein_coding protein_coding MGP_WSBEiJ_T0006466.1 MGP_WSBEiJ_G0005366.1 mouse_genomes_project 13 46532599 46772475 - A330033J07Rik lincRNA lincRNA MGP_WSBEiJ_T0006467.1 MGP_WSBEiJ_G0005366.1 mouse_genomes_project 13 46746622 46771932 - A330033J07Rik lincRNA lincRNA MGP_WSBEiJ_T0035819.1 MGP_WSBEiJ_G0019760.1 mouse_genomes_project 13 30632798 30642832 - MGP_WSBEiJ_P0035819 Serpinb1a protein_coding protein_coding MGP_WSBEiJ_T0035820.1 MGP_WSBEiJ_G0019760.1 mouse_genomes_project 13 30632799 30642832 - MGP_WSBEiJ_P0035820 Serpinb1a protein_coding protein_coding MGP_WSBEiJ_T0012636.1 MGP_WSBEiJ_G0010766.1 mouse_genomes_project 13 43511803 43512806 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037377.1 MGP_WSBEiJ_G0020294.1 mouse_genomes_project 13 121463176 121510285 - MGP_WSBEiJ_P0037377 Nim1k protein_coding protein_coding MGP_WSBEiJ_T0037378.1 MGP_WSBEiJ_G0020294.1 mouse_genomes_project 13 121476500 121491308 - MGP_WSBEiJ_P0037378 Nim1k protein_coding protein_coding MGP_WSBEiJ_T0037099.1 MGP_WSBEiJ_G0020201.1 mouse_genomes_project 13 100929481 101003631 - MGP_WSBEiJ_P0037099 protein_coding protein_coding MGP_WSBEiJ_T0035659.1 MGP_WSBEiJ_G0019688.1 mouse_genomes_project 13 21041730 21042226 - MGP_WSBEiJ_P0035659 Hist1h3c protein_coding protein_coding MGP_WSBEiJ_T0000871.1 MGP_WSBEiJ_G0000809.1 mouse_genomes_project 13 103066823 103068742 - TEC TEC MGP_WSBEiJ_T0003420.1 MGP_WSBEiJ_G0003125.1 mouse_genomes_project 13 94118416 94122209 + Gm15622 antisense antisense MGP_WSBEiJ_T0036929.1 MGP_WSBEiJ_G0020138.1 mouse_genomes_project 13 93037940 93039542 - MGP_WSBEiJ_P0036929 Spz1 protein_coding protein_coding MGP_WSBEiJ_T0035530.1 MGP_WSBEiJ_G0019604.1 mouse_genomes_project 13 17093766 17279414 + Elmo1 protein_coding retained_intron MGP_WSBEiJ_T0035531.1 MGP_WSBEiJ_G0019604.1 mouse_genomes_project 13 17093789 17638901 + MGP_WSBEiJ_P0035531 Elmo1 protein_coding protein_coding MGP_WSBEiJ_T0035532.1 MGP_WSBEiJ_G0019604.1 mouse_genomes_project 13 17114568 17367061 + Elmo1 protein_coding retained_intron MGP_WSBEiJ_T0035533.1 MGP_WSBEiJ_G0019604.1 mouse_genomes_project 13 17501385 17619888 + Elmo1 protein_coding retained_intron MGP_WSBEiJ_T0036159.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51612736 51702209 - MGP_WSBEiJ_P0036159 Auh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036160.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51612736 51712614 - MGP_WSBEiJ_P0036160 Auh protein_coding protein_coding MGP_WSBEiJ_T0036161.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51618482 51712411 - MGP_WSBEiJ_P0036161 Auh protein_coding protein_coding MGP_WSBEiJ_T0036162.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51668122 51712601 - Auh protein_coding retained_intron MGP_WSBEiJ_T0036163.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51678918 51712605 - MGP_WSBEiJ_P0036163 Auh protein_coding protein_coding MGP_WSBEiJ_T0036164.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51679694 51706864 - Auh protein_coding processed_transcript MGP_WSBEiJ_T0036165.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51690028 51712607 - MGP_WSBEiJ_P0036165 Auh protein_coding protein_coding MGP_WSBEiJ_T0036166.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51691878 51706843 - Auh protein_coding processed_transcript MGP_WSBEiJ_T0036167.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51691889 51702245 - Auh protein_coding processed_transcript MGP_WSBEiJ_T0036168.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51693191 51712634 - MGP_WSBEiJ_P0036168 Auh protein_coding protein_coding MGP_WSBEiJ_T0036169.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51695815 51706867 - Auh protein_coding processed_transcript MGP_WSBEiJ_T0036170.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51701752 51706859 - Auh protein_coding retained_intron MGP_WSBEiJ_T0036171.1 MGP_WSBEiJ_G0019883.1 mouse_genomes_project 13 51711440 51712605 - Auh protein_coding processed_transcript MGP_WSBEiJ_T0036689.1 MGP_WSBEiJ_G0020073.1 mouse_genomes_project 13 73698484 73754988 + MGP_WSBEiJ_P0036689 Slc12a7 protein_coding protein_coding MGP_WSBEiJ_T0036730.1 MGP_WSBEiJ_G0020091.1 mouse_genomes_project 13 75085127 75132105 + MGP_WSBEiJ_P0036730 Pcsk1 protein_coding protein_coding MGP_WSBEiJ_T0036731.1 MGP_WSBEiJ_G0020091.1 mouse_genomes_project 13 75085217 75101918 + Pcsk1 protein_coding retained_intron MGP_WSBEiJ_T0006454.1 MGP_WSBEiJ_G0005357.1 mouse_genomes_project 13 37024381 37030141 - Gm26514 lincRNA lincRNA MGP_WSBEiJ_T0035510.1 MGP_WSBEiJ_G0019597.1 mouse_genomes_project 13 15882727 16081526 + MGP_WSBEiJ_P0035510 Amph protein_coding protein_coding MGP_WSBEiJ_T0035511.1 MGP_WSBEiJ_G0019597.1 mouse_genomes_project 13 15882747 16081529 + MGP_WSBEiJ_P0035511 Amph protein_coding protein_coding MGP_WSBEiJ_T0035512.1 MGP_WSBEiJ_G0019597.1 mouse_genomes_project 13 15882774 16030788 + Amph protein_coding retained_intron MGP_WSBEiJ_T0035513.1 MGP_WSBEiJ_G0019597.1 mouse_genomes_project 13 16047978 16049885 + Amph protein_coding retained_intron MGP_WSBEiJ_T0035514.1 MGP_WSBEiJ_G0019597.1 mouse_genomes_project 13 16049649 16071595 + Amph protein_coding processed_transcript MGP_WSBEiJ_T0100566.1 MGP_WSBEiJ_G0039024.1 mouse_genomes_project 13 57596289 57598140 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036095.1 MGP_WSBEiJ_G0019861.1 mouse_genomes_project 13 48009088 48054826 + MGP_WSBEiJ_P0036095 Ippk protein_coding protein_coding MGP_WSBEiJ_T0035823.1 MGP_WSBEiJ_G0019762.1 mouse_genomes_project 13 30769741 30783592 + MGP_WSBEiJ_P0035823 Serpinb6b protein_coding protein_coding MGP_WSBEiJ_T0035824.1 MGP_WSBEiJ_G0019762.1 mouse_genomes_project 13 30769976 30783587 + MGP_WSBEiJ_P0035824 Serpinb6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035825.1 MGP_WSBEiJ_G0019762.1 mouse_genomes_project 13 30770035 30783587 + Serpinb6b protein_coding processed_transcript MGP_WSBEiJ_T0009800.1 MGP_WSBEiJ_G0007957.1 mouse_genomes_project 13 91157964 91158074 + Gm44338 miRNA miRNA MGP_WSBEiJ_T0002454.1 MGP_WSBEiJ_G0002368.1 mouse_genomes_project 13 16319364 16319425 + MGP_WSBEiJ_P0002454 Trgj4 TR_J_gene TR_J_gene MGP_WSBEiJ_T0009806.1 MGP_WSBEiJ_G0007963.1 mouse_genomes_project 13 108982202 108982376 - Gm22118 miRNA miRNA MGP_WSBEiJ_T0036008.1 MGP_WSBEiJ_G0019831.1 mouse_genomes_project 13 43244864 43329380 - MGP_WSBEiJ_P0036008 Dtnbp1 protein_coding protein_coding MGP_WSBEiJ_T0036009.1 MGP_WSBEiJ_G0019831.1 mouse_genomes_project 13 43244870 43329380 - MGP_WSBEiJ_P0036009 Dtnbp1 protein_coding protein_coding MGP_WSBEiJ_T0036633.1 MGP_WSBEiJ_G0020049.1 mouse_genomes_project 13 68275927 68295873 - MGP_WSBEiJ_P0036633 Mtrr protein_coding unknown_likely_coding MGP_WSBEiJ_T0035535.1 MGP_WSBEiJ_G0019606.1 mouse_genomes_project 13 18113544 18114495 - MGP_WSBEiJ_P0035535 Olfr1370 protein_coding protein_coding MGP_WSBEiJ_T0035727.1 MGP_WSBEiJ_G0019713.1 mouse_genomes_project 13 22292949 22340526 + MGP_WSBEiJ_P0035727 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035728.1 MGP_WSBEiJ_G0019713.1 mouse_genomes_project 13 22306184 22313221 + protein_coding processed_transcript MGP_WSBEiJ_T0035729.1 MGP_WSBEiJ_G0019713.1 mouse_genomes_project 13 22329786 22341164 + MGP_WSBEiJ_P0035729 protein_coding protein_coding MGP_WSBEiJ_T0012625.1 MGP_WSBEiJ_G0010755.1 mouse_genomes_project 13 28074687 28075005 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035575.1 MGP_WSBEiJ_G0019625.1 mouse_genomes_project 13 18696711 18700400 - MGP_WSBEiJ_P0035575 Olfr11 protein_coding protein_coding MGP_WSBEiJ_T0035576.1 MGP_WSBEiJ_G0019625.1 mouse_genomes_project 13 18696711 18697653 - MGP_WSBEiJ_P0035576 Olfr11 protein_coding protein_coding MGP_WSBEiJ_T0035647.1 MGP_WSBEiJ_G0019680.1 mouse_genomes_project 13 20858029 20858633 + MGP_WSBEiJ_P0035647 Hist1h3d protein_coding protein_coding MGP_WSBEiJ_T0036726.1 MGP_WSBEiJ_G0020088.1 mouse_genomes_project 13 74331101 74341369 - MGP_WSBEiJ_P0036726 Zfp72 protein_coding protein_coding MGP_WSBEiJ_T0035578.1 MGP_WSBEiJ_G0019627.1 mouse_genomes_project 13 18731314 18732221 - MGP_WSBEiJ_P0035578 protein_coding protein_coding MGP_WSBEiJ_T0012622.1 MGP_WSBEiJ_G0010752.1 mouse_genomes_project 13 26741254 26741763 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036548.1 MGP_WSBEiJ_G0020003.1 mouse_genomes_project 13 63980152 63987146 + MGP_WSBEiJ_P0036548 Cdk20 protein_coding protein_coding MGP_WSBEiJ_T0009801.1 MGP_WSBEiJ_G0007958.1 mouse_genomes_project 13 92206984 92207064 + Gm27656 miRNA miRNA MGP_WSBEiJ_T0009797.1 MGP_WSBEiJ_G0007954.1 mouse_genomes_project 13 82820299 82820358 - Mir3961 miRNA miRNA MGP_WSBEiJ_T0035324.1 MGP_WSBEiJ_G0019534.1 mouse_genomes_project 13 14459 43621 + MGP_WSBEiJ_P0035324 Gdi2 protein_coding protein_coding MGP_WSBEiJ_T0035694.1 MGP_WSBEiJ_G0019705.1 mouse_genomes_project 13 21709841 21790034 + MGP_WSBEiJ_P0035694 Cmah protein_coding unknown_likely_coding MGP_WSBEiJ_T0035695.1 MGP_WSBEiJ_G0019705.1 mouse_genomes_project 13 21712305 21754366 + Cmah protein_coding processed_transcript MGP_WSBEiJ_T0035696.1 MGP_WSBEiJ_G0019705.1 mouse_genomes_project 13 21734662 21753925 + Cmah protein_coding processed_transcript MGP_WSBEiJ_T0035697.1 MGP_WSBEiJ_G0019705.1 mouse_genomes_project 13 21734985 21755353 + Cmah protein_coding processed_transcript MGP_WSBEiJ_T0036033.1 MGP_WSBEiJ_G0019843.1 mouse_genomes_project 13 45442973 45445266 - MGP_WSBEiJ_P0036033 Nhlrc1 protein_coding protein_coding MGP_WSBEiJ_T0012657.1 MGP_WSBEiJ_G0010787.1 mouse_genomes_project 13 76697939 76698360 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035837.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31823317 31918201 - MGP_WSBEiJ_P0035837 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035838.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31823317 31843514 - MGP_WSBEiJ_P0035838 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035839.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31823317 31843403 - MGP_WSBEiJ_P0035839 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035840.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31823326 31843315 - MGP_WSBEiJ_P0035840 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035841.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31823631 31827449 - Serpinb6a protein_coding processed_transcript MGP_WSBEiJ_T0035842.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31824190 31918201 - MGP_WSBEiJ_P0035842 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035843.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31828182 31843211 - MGP_WSBEiJ_P0035843 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035844.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31828198 31843274 - MGP_WSBEiJ_P0035844 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035845.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31828275 31843183 - MGP_WSBEiJ_P0035845 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035846.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31828880 31843297 - Serpinb6a protein_coding retained_intron MGP_WSBEiJ_T0035847.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31830570 31843296 - MGP_WSBEiJ_P0035847 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035848.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31830642 31918174 - MGP_WSBEiJ_P0035848 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035849.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31837410 31843273 - MGP_WSBEiJ_P0035849 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035850.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31837423 31918193 - MGP_WSBEiJ_P0035850 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035851.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31838860 31918147 - MGP_WSBEiJ_P0035851 Serpinb6a protein_coding protein_coding MGP_WSBEiJ_T0035854.1 MGP_WSBEiJ_G0019770.1 mouse_genomes_project 13 31901912 31918177 - Serpinb6a protein_coding processed_transcript MGP_WSBEiJ_T0012599.1 MGP_WSBEiJ_G0010729.1 mouse_genomes_project 13 19077055 19078471 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036871.1 MGP_WSBEiJ_G0020122.1 mouse_genomes_project 13 90473959 90497513 + MGP_WSBEiJ_P0036871 Tmem167 protein_coding protein_coding MGP_WSBEiJ_T0036872.1 MGP_WSBEiJ_G0020122.1 mouse_genomes_project 13 90474570 90531550 + MGP_WSBEiJ_P0036872 Tmem167 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036873.1 MGP_WSBEiJ_G0020122.1 mouse_genomes_project 13 90474598 90489919 + MGP_WSBEiJ_P0036873 Tmem167 protein_coding protein_coding MGP_WSBEiJ_T0012623.1 MGP_WSBEiJ_G0010753.1 mouse_genomes_project 13 27801169 27801292 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035509.1 MGP_WSBEiJ_G0019596.1 mouse_genomes_project 13 15644043 15805998 + MGP_WSBEiJ_P0035509 Vps41 protein_coding protein_coding MGP_WSBEiJ_T0035952.1 MGP_WSBEiJ_G0019812.1 mouse_genomes_project 13 39337795 39377599 - MGP_WSBEiJ_P0035952 Elovl2 protein_coding protein_coding MGP_WSBEiJ_T0035953.1 MGP_WSBEiJ_G0019812.1 mouse_genomes_project 13 39337799 39377356 - MGP_WSBEiJ_P0035953 Elovl2 protein_coding protein_coding MGP_WSBEiJ_T0009761.1 MGP_WSBEiJ_G0007918.1 mouse_genomes_project 13 18453213 18453274 - Mir6942 miRNA miRNA MGP_WSBEiJ_T0035454.1 MGP_WSBEiJ_G0019574.1 mouse_genomes_project 13 9930495 9940626 + MGP_WSBEiJ_P0035454 protein_coding protein_coding MGP_WSBEiJ_T0035772.1 MGP_WSBEiJ_G0019738.1 mouse_genomes_project 13 25502216 25502476 + MGP_WSBEiJ_P0035772 protein_coding protein_coding MGP_WSBEiJ_T0036595.1 MGP_WSBEiJ_G0020027.1 mouse_genomes_project 13 66719923 66728496 + MGP_WSBEiJ_P0036595 protein_coding protein_coding MGP_WSBEiJ_T0036707.1 MGP_WSBEiJ_G0020083.1 mouse_genomes_project 13 74171742 74252148 - MGP_WSBEiJ_P0036707 Ahrr protein_coding protein_coding MGP_WSBEiJ_T0036708.1 MGP_WSBEiJ_G0020083.1 mouse_genomes_project 13 74174152 74214662 - Ahrr protein_coding retained_intron MGP_WSBEiJ_T0036709.1 MGP_WSBEiJ_G0020083.1 mouse_genomes_project 13 74181090 74217789 - Ahrr protein_coding processed_transcript MGP_WSBEiJ_T0036710.1 MGP_WSBEiJ_G0020083.1 mouse_genomes_project 13 74182885 74218545 - Ahrr protein_coding processed_transcript MGP_WSBEiJ_T0036089.1 MGP_WSBEiJ_G0019859.1 mouse_genomes_project 13 47841501 47893737 - MGP_WSBEiJ_P0036089 Fgd3 protein_coding protein_coding MGP_WSBEiJ_T0036090.1 MGP_WSBEiJ_G0019859.1 mouse_genomes_project 13 47843057 47883153 - MGP_WSBEiJ_P0036090 Fgd3 protein_coding protein_coding MGP_WSBEiJ_T0036091.1 MGP_WSBEiJ_G0019859.1 mouse_genomes_project 13 47857529 47904754 - MGP_WSBEiJ_P0036091 Fgd3 protein_coding protein_coding MGP_WSBEiJ_T0100543.1 MGP_WSBEiJ_G0039001.1 mouse_genomes_project 13 20212242 20212479 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099039.1 MGP_WSBEiJ_G0037702.1 mouse_genomes_project 13 20055201 20055332 - Gm23774 snoRNA snoRNA MGP_WSBEiJ_T0009785.1 MGP_WSBEiJ_G0007942.1 mouse_genomes_project 13 57501674 57501780 - Mir6369 miRNA miRNA MGP_WSBEiJ_T0035629.1 MGP_WSBEiJ_G0019668.1 mouse_genomes_project 13 20357678 20358575 + MGP_WSBEiJ_P0035629 Vmn1r218 protein_coding protein_coding MGP_WSBEiJ_T0006529.1 MGP_WSBEiJ_G0005407.1 mouse_genomes_project 13 99861734 99869898 + Gm807 lincRNA lincRNA MGP_WSBEiJ_T0035745.1 MGP_WSBEiJ_G0019722.1 mouse_genomes_project 13 24641803 24648788 + MGP_WSBEiJ_P0035745 Prl3c1 protein_coding protein_coding MGP_WSBEiJ_T0035746.1 MGP_WSBEiJ_G0019722.1 mouse_genomes_project 13 24643942 24648788 + MGP_WSBEiJ_P0035746 Prl3c1 protein_coding protein_coding MGP_WSBEiJ_T0035747.1 MGP_WSBEiJ_G0019722.1 mouse_genomes_project 13 24644392 24648651 + MGP_WSBEiJ_P0035747 Prl3c1 protein_coding protein_coding MGP_WSBEiJ_T0037202.1 MGP_WSBEiJ_G0020229.1 mouse_genomes_project 13 105985349 106095900 - MGP_WSBEiJ_P0037202 Rgs7bp protein_coding protein_coding MGP_WSBEiJ_T0035347.1 MGP_WSBEiJ_G0019547.1 mouse_genomes_project 13 775473 787537 - MGP_WSBEiJ_P0035347 Akr1c12 protein_coding protein_coding MGP_WSBEiJ_T0035348.1 MGP_WSBEiJ_G0019547.1 mouse_genomes_project 13 775690 787460 - MGP_WSBEiJ_P0035348 Akr1c12 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035750.1 MGP_WSBEiJ_G0019725.1 mouse_genomes_project 13 24759316 24765945 + MGP_WSBEiJ_P0035750 Prl6a1 protein_coding protein_coding MGP_WSBEiJ_T0035751.1 MGP_WSBEiJ_G0019725.1 mouse_genomes_project 13 24760639 24765945 + MGP_WSBEiJ_P0035751 Prl6a1 protein_coding protein_coding MGP_WSBEiJ_T0036172.1 MGP_WSBEiJ_G0019884.1 mouse_genomes_project 13 51751515 51765344 - MGP_WSBEiJ_P0036172 Nfil3 protein_coding protein_coding MGP_WSBEiJ_T0035821.1 MGP_WSBEiJ_G0019761.1 mouse_genomes_project 13 30678317 30701850 - MGP_WSBEiJ_P0035821 Serpinb1c protein_coding protein_coding MGP_WSBEiJ_T0035822.1 MGP_WSBEiJ_G0019761.1 mouse_genomes_project 13 30680511 30701827 - MGP_WSBEiJ_P0035822 Serpinb1c protein_coding protein_coding MGP_WSBEiJ_T0012642.1 MGP_WSBEiJ_G0010772.1 mouse_genomes_project 13 63468582 63469223 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035360.1 MGP_WSBEiJ_G0019553.1 mouse_genomes_project 13 2396485 2408289 + MGP_WSBEiJ_P0035360 Klf6 protein_coding protein_coding MGP_WSBEiJ_T0012680.1 MGP_WSBEiJ_G0010810.1 mouse_genomes_project 13 114268691 114269648 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036294.1 MGP_WSBEiJ_G0019915.1 mouse_genomes_project 13 54267519 54270944 + MGP_WSBEiJ_P0036294 Prelid1 protein_coding protein_coding MGP_WSBEiJ_T0012604.1 MGP_WSBEiJ_G0010734.1 mouse_genomes_project 13 20525284 20525432 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100544.1 MGP_WSBEiJ_G0039002.1 mouse_genomes_project 13 20241355 20241645 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035871.1 MGP_WSBEiJ_G0019778.1 mouse_genomes_project 13 32658555 32674115 + MGP_WSBEiJ_P0035871 Fam50b protein_coding protein_coding MGP_WSBEiJ_T0035325.1 MGP_WSBEiJ_G0019535.1 mouse_genomes_project 13 43395 90314 - MGP_WSBEiJ_P0035325 Fam208b protein_coding protein_coding MGP_WSBEiJ_T0035628.1 MGP_WSBEiJ_G0019667.1 mouse_genomes_project 13 20333148 20334045 - MGP_WSBEiJ_P0035628 Vmn1r220 protein_coding protein_coding MGP_WSBEiJ_T0000849.1 MGP_WSBEiJ_G0000787.1 mouse_genomes_project 13 40038480 40038943 + TEC TEC MGP_WSBEiJ_T0036875.1 MGP_WSBEiJ_G0020124.1 mouse_genomes_project 13 91289010 91306092 - MGP_WSBEiJ_P0036875 Atp6ap1l protein_coding protein_coding MGP_WSBEiJ_T0036876.1 MGP_WSBEiJ_G0020124.1 mouse_genomes_project 13 91289016 91311589 - MGP_WSBEiJ_P0036876 Atp6ap1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036877.1 MGP_WSBEiJ_G0020124.1 mouse_genomes_project 13 91289016 91311637 - MGP_WSBEiJ_P0036877 Atp6ap1l protein_coding protein_coding MGP_WSBEiJ_T0036878.1 MGP_WSBEiJ_G0020124.1 mouse_genomes_project 13 91289128 91311622 - MGP_WSBEiJ_P0036878 Atp6ap1l protein_coding protein_coding MGP_WSBEiJ_T0036879.1 MGP_WSBEiJ_G0020124.1 mouse_genomes_project 13 91305047 91311617 - Atp6ap1l protein_coding processed_transcript MGP_WSBEiJ_T0037071.1 MGP_WSBEiJ_G0020191.1 mouse_genomes_project 13 99747122 99747603 - MGP_WSBEiJ_P0037071 1700024P04Rik protein_coding protein_coding MGP_WSBEiJ_T0036760.1 MGP_WSBEiJ_G0020102.1 mouse_genomes_project 13 77157253 77622768 + MGP_WSBEiJ_P0036760 2210408I21Rik protein_coding protein_coding MGP_WSBEiJ_T0012665.1 MGP_WSBEiJ_G0010795.1 mouse_genomes_project 13 88046570 88047576 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012586.1 MGP_WSBEiJ_G0010716.1 mouse_genomes_project 13 755671 755962 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012621.1 MGP_WSBEiJ_G0010751.1 mouse_genomes_project 13 26086286 26086776 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037045.1 MGP_WSBEiJ_G0020179.1 mouse_genomes_project 13 97882162 97894082 + MGP_WSBEiJ_P0037045 Enc1 protein_coding protein_coding MGP_WSBEiJ_T0036968.1 MGP_WSBEiJ_G0020154.1 mouse_genomes_project 13 95328721 95385188 + MGP_WSBEiJ_P0036968 Tbca protein_coding protein_coding MGP_WSBEiJ_T0036969.1 MGP_WSBEiJ_G0020155.1 mouse_genomes_project 13 95421040 95431289 + MGP_WSBEiJ_P0036969 Otp protein_coding protein_coding MGP_WSBEiJ_T0036970.1 MGP_WSBEiJ_G0020155.1 mouse_genomes_project 13 95428043 95429999 + Otp protein_coding processed_transcript MGP_WSBEiJ_T0012592.1 MGP_WSBEiJ_G0010722.1 mouse_genomes_project 13 16394201 16394650 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036367.1 MGP_WSBEiJ_G0019945.1 mouse_genomes_project 13 55550493 55556864 + MGP_WSBEiJ_P0036367 Fbxl21 protein_coding protein_coding MGP_WSBEiJ_T0036368.1 MGP_WSBEiJ_G0019945.1 mouse_genomes_project 13 55550512 55567312 + MGP_WSBEiJ_P0036368 Fbxl21 protein_coding protein_coding MGP_WSBEiJ_T0036369.1 MGP_WSBEiJ_G0019945.1 mouse_genomes_project 13 55550529 55567177 + MGP_WSBEiJ_P0036369 Fbxl21 protein_coding protein_coding MGP_WSBEiJ_T0036370.1 MGP_WSBEiJ_G0019945.1 mouse_genomes_project 13 55550534 55559483 + MGP_WSBEiJ_P0036370 Fbxl21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035588.1 MGP_WSBEiJ_G0019636.1 mouse_genomes_project 13 18854987 18859798 - MGP_WSBEiJ_P0035588 Hist1h2ap protein_coding protein_coding MGP_WSBEiJ_T0097797.1 MGP_WSBEiJ_G0036460.1 mouse_genomes_project 13 17875175 17875299 + Gm25605 snRNA snRNA MGP_WSBEiJ_T0003421.1 MGP_WSBEiJ_G0003126.1 mouse_genomes_project 13 94211303 94224608 - AW495222 antisense antisense MGP_WSBEiJ_T0003422.1 MGP_WSBEiJ_G0003126.1 mouse_genomes_project 13 94220819 94224567 - AW495222 antisense antisense MGP_WSBEiJ_T0099048.1 MGP_WSBEiJ_G0037711.1 mouse_genomes_project 13 45405501 45405630 + Gm24769 snoRNA snoRNA MGP_WSBEiJ_T0037031.1 MGP_WSBEiJ_G0020176.1 mouse_genomes_project 13 97761529 97771918 - MGP_WSBEiJ_P0037031 protein_coding protein_coding MGP_WSBEiJ_T0097791.1 MGP_WSBEiJ_G0036454.1 mouse_genomes_project 13 10067029 10067129 - Gm26133 snRNA snRNA MGP_WSBEiJ_T0035655.1 MGP_WSBEiJ_G0019686.1 mouse_genomes_project 13 20998170 21005022 - MGP_WSBEiJ_P0035655 Hfe protein_coding protein_coding MGP_WSBEiJ_T0035656.1 MGP_WSBEiJ_G0019686.1 mouse_genomes_project 13 20998714 21005022 - MGP_WSBEiJ_P0035656 Hfe protein_coding protein_coding MGP_WSBEiJ_T0035657.1 MGP_WSBEiJ_G0019686.1 mouse_genomes_project 13 20998714 21005022 - MGP_WSBEiJ_P0035657 Hfe protein_coding protein_coding MGP_WSBEiJ_T0011152.1 MGP_WSBEiJ_G0009309.1 mouse_genomes_project 13 41304001 41304264 - Gm26086 misc_RNA misc_RNA MGP_WSBEiJ_T0036966.1 MGP_WSBEiJ_G0020153.1 mouse_genomes_project 13 94886436 95099199 + MGP_WSBEiJ_P0036966 Ap3b1 protein_coding protein_coding MGP_WSBEiJ_T0036967.1 MGP_WSBEiJ_G0020153.1 mouse_genomes_project 13 94886580 95098641 + MGP_WSBEiJ_P0036967 Ap3b1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037064.1 MGP_WSBEiJ_G0020189.1 mouse_genomes_project 13 99473440 99572154 - MGP_WSBEiJ_P0037064 Fcho2 protein_coding protein_coding MGP_WSBEiJ_T0037065.1 MGP_WSBEiJ_G0020189.1 mouse_genomes_project 13 99473440 99572154 - MGP_WSBEiJ_P0037065 Fcho2 protein_coding protein_coding MGP_WSBEiJ_T0037066.1 MGP_WSBEiJ_G0020189.1 mouse_genomes_project 13 99502938 99572154 - MGP_WSBEiJ_P0037066 Fcho2 protein_coding protein_coding MGP_WSBEiJ_T0037067.1 MGP_WSBEiJ_G0020189.1 mouse_genomes_project 13 99504910 99572154 - MGP_WSBEiJ_P0037067 Fcho2 protein_coding protein_coding MGP_WSBEiJ_T0036652.1 MGP_WSBEiJ_G0020057.1 mouse_genomes_project 13 69579119 69585341 + MGP_WSBEiJ_P0036652 Med10 protein_coding protein_coding MGP_WSBEiJ_T0036599.1 MGP_WSBEiJ_G0020031.1 mouse_genomes_project 13 66858175 66871076 - MGP_WSBEiJ_P0036599 Zfp457 protein_coding protein_coding MGP_WSBEiJ_T0036600.1 MGP_WSBEiJ_G0020031.1 mouse_genomes_project 13 66870349 66871131 - Zfp457 protein_coding retained_intron MGP_WSBEiJ_T0036331.1 MGP_WSBEiJ_G0019926.1 mouse_genomes_project 13 54482600 54487920 - MGP_WSBEiJ_P0036331 Dok3 protein_coding protein_coding MGP_WSBEiJ_T0035549.1 MGP_WSBEiJ_G0019613.1 mouse_genomes_project 13 18442373 18459353 - MGP_WSBEiJ_P0035549 protein_coding protein_coding MGP_WSBEiJ_T0035550.1 MGP_WSBEiJ_G0019613.1 mouse_genomes_project 13 18442373 18459395 - MGP_WSBEiJ_P0035550 protein_coding protein_coding MGP_WSBEiJ_T0035551.1 MGP_WSBEiJ_G0019613.1 mouse_genomes_project 13 18443976 18450870 - MGP_WSBEiJ_P0035551 protein_coding protein_coding MGP_WSBEiJ_T0035552.1 MGP_WSBEiJ_G0019613.1 mouse_genomes_project 13 18445407 18459335 - MGP_WSBEiJ_P0035552 protein_coding protein_coding MGP_WSBEiJ_T0035553.1 MGP_WSBEiJ_G0019613.1 mouse_genomes_project 13 18449338 18459356 - MGP_WSBEiJ_P0035553 protein_coding protein_coding MGP_WSBEiJ_T0035554.1 MGP_WSBEiJ_G0019613.1 mouse_genomes_project 13 18458183 18459310 - protein_coding processed_transcript MGP_WSBEiJ_T0035966.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 40911340 41396647 + MGP_WSBEiJ_P0035966 Phactr1 protein_coding protein_coding MGP_WSBEiJ_T0035967.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 40911516 41205623 + Phactr1 protein_coding retained_intron MGP_WSBEiJ_T0035968.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 40912230 41393382 + MGP_WSBEiJ_P0035968 Phactr1 protein_coding protein_coding MGP_WSBEiJ_T0035969.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 40913414 41393326 + MGP_WSBEiJ_P0035969 Phactr1 protein_coding protein_coding MGP_WSBEiJ_T0035970.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 40942880 41393522 + MGP_WSBEiJ_P0035970 Phactr1 protein_coding protein_coding MGP_WSBEiJ_T0035971.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 40942918 41396649 + MGP_WSBEiJ_P0035971 Phactr1 protein_coding protein_coding MGP_WSBEiJ_T0035972.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41108231 41393441 + MGP_WSBEiJ_P0035972 Phactr1 protein_coding protein_coding MGP_WSBEiJ_T0035973.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41109629 41203411 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035974.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41367416 41393504 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035975.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41380514 41393532 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035976.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41380529 41393491 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035977.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41383498 41393386 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035978.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41383498 41393386 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035979.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41383530 41393386 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035980.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41391134 41392379 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035981.1 MGP_WSBEiJ_G0019821.1 mouse_genomes_project 13 41393504 41396636 + Phactr1 protein_coding processed_transcript MGP_WSBEiJ_T0035761.1 MGP_WSBEiJ_G0019730.1 mouse_genomes_project 13 25006509 25014792 - MGP_WSBEiJ_P0035761 Prl8a9 protein_coding protein_coding MGP_WSBEiJ_T0036332.1 MGP_WSBEiJ_G0019927.1 mouse_genomes_project 13 54489791 54497537 - MGP_WSBEiJ_P0036332 Ddx41 protein_coding protein_coding MGP_WSBEiJ_T0006513.1 MGP_WSBEiJ_G0005395.1 mouse_genomes_project 13 84074181 84112113 + 2810049E08Rik lincRNA lincRNA MGP_WSBEiJ_T0036601.1 MGP_WSBEiJ_G0020032.1 mouse_genomes_project 13 66877647 66897895 - MGP_WSBEiJ_P0036601 Zfp595 protein_coding protein_coding MGP_WSBEiJ_T0036602.1 MGP_WSBEiJ_G0020032.1 mouse_genomes_project 13 66878370 66897908 - MGP_WSBEiJ_P0036602 Zfp595 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036603.1 MGP_WSBEiJ_G0020032.1 mouse_genomes_project 13 66879082 66897884 - MGP_WSBEiJ_P0036603 Zfp595 protein_coding protein_coding MGP_WSBEiJ_T0036604.1 MGP_WSBEiJ_G0020032.1 mouse_genomes_project 13 66879390 66897848 - MGP_WSBEiJ_P0036604 Zfp595 protein_coding protein_coding MGP_WSBEiJ_T0035488.1 MGP_WSBEiJ_G0019588.1 mouse_genomes_project 13 11469372 11482113 + MGP_WSBEiJ_P0035488 Psma2 protein_coding protein_coding MGP_WSBEiJ_T0009802.1 MGP_WSBEiJ_G0007959.1 mouse_genomes_project 13 94301254 94301315 + Mir5624 miRNA miRNA MGP_WSBEiJ_T0100012.1 MGP_WSBEiJ_G0038650.1 mouse_genomes_project 13 104142908 104147184 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0036611.1 MGP_WSBEiJ_G0020038.1 mouse_genomes_project 13 67070080 67084501 - MGP_WSBEiJ_P0036611 protein_coding protein_coding MGP_WSBEiJ_T0036653.1 MGP_WSBEiJ_G0020058.1 mouse_genomes_project 13 70379556 70431930 - MGP_WSBEiJ_P0036653 Ice1 protein_coding protein_coding MGP_WSBEiJ_T0012676.1 MGP_WSBEiJ_G0010806.1 mouse_genomes_project 13 107642068 107642314 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036541.1 MGP_WSBEiJ_G0019999.1 mouse_genomes_project 13 63691039 63717229 + MGP_WSBEiJ_P0036541 Habp4 protein_coding protein_coding MGP_WSBEiJ_T0011162.1 MGP_WSBEiJ_G0009319.1 mouse_genomes_project 13 103182574 103182858 + Gm25808 misc_RNA misc_RNA MGP_WSBEiJ_T0096945.1 MGP_WSBEiJ_G0035626.1 mouse_genomes_project 13 137781 137895 + Gm23084 rRNA rRNA MGP_WSBEiJ_T0012670.1 MGP_WSBEiJ_G0010800.1 mouse_genomes_project 13 94233501 94233848 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006423.1 MGP_WSBEiJ_G0005335.1 mouse_genomes_project 13 21962958 21969678 - C530050E15Rik lincRNA lincRNA MGP_WSBEiJ_T0035349.1 MGP_WSBEiJ_G0019548.1 mouse_genomes_project 13 943898 964583 + MGP_WSBEiJ_P0035349 Akr1c6 protein_coding protein_coding MGP_WSBEiJ_T0035350.1 MGP_WSBEiJ_G0019548.1 mouse_genomes_project 13 944024 944639 + Akr1c6 protein_coding processed_transcript MGP_WSBEiJ_T0035351.1 MGP_WSBEiJ_G0019548.1 mouse_genomes_project 13 945738 955523 + MGP_WSBEiJ_P0035351 Akr1c6 protein_coding protein_coding MGP_WSBEiJ_T0035538.1 MGP_WSBEiJ_G0019608.1 mouse_genomes_project 13 18222431 18223403 + Trim27 protein_coding processed_transcript MGP_WSBEiJ_T0035539.1 MGP_WSBEiJ_G0019608.1 mouse_genomes_project 13 18223199 18238636 + MGP_WSBEiJ_P0035539 Trim27 protein_coding protein_coding MGP_WSBEiJ_T0035540.1 MGP_WSBEiJ_G0019608.1 mouse_genomes_project 13 18233989 18234549 + Trim27 protein_coding retained_intron MGP_WSBEiJ_T0035541.1 MGP_WSBEiJ_G0019608.1 mouse_genomes_project 13 18234220 18236595 + MGP_WSBEiJ_P0035541 Trim27 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035583.1 MGP_WSBEiJ_G0019631.1 mouse_genomes_project 13 18787818 18789128 + MGP_WSBEiJ_P0035583 Hist1h2bm protein_coding protein_coding MGP_WSBEiJ_T0012669.1 MGP_WSBEiJ_G0010799.1 mouse_genomes_project 13 92751991 92752240 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036353.1 MGP_WSBEiJ_G0019938.1 mouse_genomes_project 13 55072926 55137868 - MGP_WSBEiJ_P0036353 H2afy protein_coding protein_coding MGP_WSBEiJ_T0036354.1 MGP_WSBEiJ_G0019938.1 mouse_genomes_project 13 55072926 55137868 - MGP_WSBEiJ_P0036354 H2afy protein_coding protein_coding MGP_WSBEiJ_T0036355.1 MGP_WSBEiJ_G0019938.1 mouse_genomes_project 13 55073473 55083852 - H2afy protein_coding retained_intron MGP_WSBEiJ_T0036356.1 MGP_WSBEiJ_G0019938.1 mouse_genomes_project 13 55073666 55089390 - H2afy protein_coding retained_intron MGP_WSBEiJ_T0036357.1 MGP_WSBEiJ_G0019938.1 mouse_genomes_project 13 55094886 55137767 - H2afy protein_coding processed_transcript MGP_WSBEiJ_T0036358.1 MGP_WSBEiJ_G0019938.1 mouse_genomes_project 13 55099383 55137677 - H2afy protein_coding retained_intron MGP_WSBEiJ_T0036359.1 MGP_WSBEiJ_G0019938.1 mouse_genomes_project 13 55102924 55138597 - H2afy protein_coding processed_transcript MGP_WSBEiJ_T0036360.1 MGP_WSBEiJ_G0019938.1 mouse_genomes_project 13 55102935 55137062 - H2afy protein_coding processed_transcript MGP_WSBEiJ_T0035986.1 MGP_WSBEiJ_G0019825.1 mouse_genomes_project 13 41656772 41661233 + MGP_WSBEiJ_P0035986 Nol7 protein_coding protein_coding MGP_WSBEiJ_T0006482.1 MGP_WSBEiJ_G0005374.1 mouse_genomes_project 13 53784147 53784691 + Gm29431 lincRNA lincRNA MGP_WSBEiJ_T0036552.1 MGP_WSBEiJ_G0020007.1 mouse_genomes_project 13 64537942 64542859 + MGP_WSBEiJ_P0036552 Spata31d1c protein_coding protein_coding MGP_WSBEiJ_T0036738.1 MGP_WSBEiJ_G0020096.1 mouse_genomes_project 13 76014720 76032731 - MGP_WSBEiJ_P0036738 Rfesd protein_coding protein_coding MGP_WSBEiJ_T0036739.1 MGP_WSBEiJ_G0020096.1 mouse_genomes_project 13 76014720 76032881 - MGP_WSBEiJ_P0036739 Rfesd protein_coding protein_coding MGP_WSBEiJ_T0036740.1 MGP_WSBEiJ_G0020096.1 mouse_genomes_project 13 76014720 76032775 - MGP_WSBEiJ_P0036740 Rfesd protein_coding protein_coding MGP_WSBEiJ_T0099072.1 MGP_WSBEiJ_G0037735.1 mouse_genomes_project 13 106268453 106268583 - Gm25631 snoRNA snoRNA MGP_WSBEiJ_T0036867.1 MGP_WSBEiJ_G0020121.1 mouse_genomes_project 13 90142624 90474360 - MGP_WSBEiJ_P0036867 Xrcc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036868.1 MGP_WSBEiJ_G0020121.1 mouse_genomes_project 13 90224394 90474445 - MGP_WSBEiJ_P0036868 Xrcc4 protein_coding protein_coding MGP_WSBEiJ_T0036869.1 MGP_WSBEiJ_G0020121.1 mouse_genomes_project 13 90447281 90474373 - MGP_WSBEiJ_P0036869 Xrcc4 protein_coding protein_coding MGP_WSBEiJ_T0036870.1 MGP_WSBEiJ_G0020121.1 mouse_genomes_project 13 90447316 90473919 - MGP_WSBEiJ_P0036870 Xrcc4 protein_coding protein_coding MGP_WSBEiJ_T0016749.1 MGP_WSBEiJ_G0014666.1 mouse_genomes_project 13 20792174 20796137 - Gm11335 processed_transcript processed_transcript MGP_WSBEiJ_T0003381.1 MGP_WSBEiJ_G0003105.1 mouse_genomes_project 13 47431357 47435749 + Phf2os1 antisense antisense MGP_WSBEiJ_T0035610.1 MGP_WSBEiJ_G0019649.1 mouse_genomes_project 13 19368475 19369435 - MGP_WSBEiJ_P0035610 Vmn1r193 protein_coding protein_coding MGP_WSBEiJ_T0036753.1 MGP_WSBEiJ_G0020101.1 mouse_genomes_project 13 77061827 77157187 - MGP_WSBEiJ_P0036753 Slf1 protein_coding protein_coding MGP_WSBEiJ_T0036754.1 MGP_WSBEiJ_G0020101.1 mouse_genomes_project 13 77062712 77066133 - Slf1 protein_coding retained_intron MGP_WSBEiJ_T0036755.1 MGP_WSBEiJ_G0020101.1 mouse_genomes_project 13 77121350 77157179 - MGP_WSBEiJ_P0036755 Slf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036756.1 MGP_WSBEiJ_G0020101.1 mouse_genomes_project 13 77125253 77157179 - MGP_WSBEiJ_P0036756 Slf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036757.1 MGP_WSBEiJ_G0020101.1 mouse_genomes_project 13 77126211 77153143 - MGP_WSBEiJ_P0036757 Slf1 protein_coding protein_coding MGP_WSBEiJ_T0036758.1 MGP_WSBEiJ_G0020101.1 mouse_genomes_project 13 77126297 77157152 - MGP_WSBEiJ_P0036758 Slf1 protein_coding protein_coding MGP_WSBEiJ_T0036759.1 MGP_WSBEiJ_G0020101.1 mouse_genomes_project 13 77127238 77157174 - Slf1 protein_coding retained_intron MGP_WSBEiJ_T0037147.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103702189 104331844 - MGP_WSBEiJ_P0037147 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037148.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103702194 104332085 - MGP_WSBEiJ_P0037148 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037149.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103704489 104074592 - MGP_WSBEiJ_P0037149 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037150.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103704705 103927512 - MGP_WSBEiJ_P0037150 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037151.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103704705 103872388 - MGP_WSBEiJ_P0037151 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037152.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103711693 103872068 - MGP_WSBEiJ_P0037152 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037153.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103723852 103927393 - MGP_WSBEiJ_P0037153 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037154.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103737836 103742091 - Mast4 protein_coding retained_intron MGP_WSBEiJ_T0037155.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103748705 103752622 - Mast4 protein_coding retained_intron MGP_WSBEiJ_T0037156.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103764763 104074575 - MGP_WSBEiJ_P0037156 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037157.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103767560 103771573 - Mast4 protein_coding retained_intron MGP_WSBEiJ_T0037158.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103817346 104332085 - MGP_WSBEiJ_P0037158 Mast4 protein_coding protein_coding MGP_WSBEiJ_T0037159.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103818496 103872357 - Mast4 protein_coding retained_intron MGP_WSBEiJ_T0037160.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 103995125 104332087 - Mast4 protein_coding retained_intron MGP_WSBEiJ_T0037161.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 104034878 104332122 - Mast4 protein_coding processed_transcript MGP_WSBEiJ_T0037162.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 104046850 104332076 - Mast4 protein_coding processed_transcript MGP_WSBEiJ_T0037163.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 104071921 104074591 - Mast4 protein_coding retained_intron MGP_WSBEiJ_T0037164.1 MGP_WSBEiJ_G0020216.1 mouse_genomes_project 13 104330642 104332117 - Mast4 protein_coding retained_intron MGP_WSBEiJ_T0099042.1 MGP_WSBEiJ_G0037705.1 mouse_genomes_project 13 29069329 29069444 + Gm22330 snoRNA snoRNA MGP_WSBEiJ_T0009787.1 MGP_WSBEiJ_G0007944.1 mouse_genomes_project 13 59577851 59577950 + Gm24999 miRNA miRNA MGP_WSBEiJ_T0006453.1 MGP_WSBEiJ_G0005356.1 mouse_genomes_project 13 35495403 35499734 + Gm29590 lincRNA lincRNA MGP_WSBEiJ_T0036658.1 MGP_WSBEiJ_G0020060.1 mouse_genomes_project 13 70696330 70697886 + MGP_WSBEiJ_P0036658 8030423J24Rik protein_coding protein_coding MGP_WSBEiJ_T0035735.1 MGP_WSBEiJ_G0019716.1 mouse_genomes_project 13 22596300 22615373 - MGP_WSBEiJ_P0035735 Nrsn1 protein_coding protein_coding MGP_WSBEiJ_T0035736.1 MGP_WSBEiJ_G0019716.1 mouse_genomes_project 13 22596452 22607952 - MGP_WSBEiJ_P0035736 Nrsn1 protein_coding protein_coding MGP_WSBEiJ_T0035737.1 MGP_WSBEiJ_G0019716.1 mouse_genomes_project 13 22597669 22607949 - Nrsn1 protein_coding processed_transcript MGP_WSBEiJ_T0035738.1 MGP_WSBEiJ_G0019716.1 mouse_genomes_project 13 22615325 22615793 - Nrsn1 protein_coding processed_transcript MGP_WSBEiJ_T0000845.1 MGP_WSBEiJ_G0000784.1 mouse_genomes_project 13 36166560 36167879 - TEC TEC MGP_WSBEiJ_T0000846.1 MGP_WSBEiJ_G0000784.1 mouse_genomes_project 13 36167519 36167879 - TEC TEC MGP_WSBEiJ_T0036882.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 91906529 92150032 + Ssbp2 protein_coding processed_transcript MGP_WSBEiJ_T0036883.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 91907288 92164534 + MGP_WSBEiJ_P0036883 Ssbp2 protein_coding protein_coding MGP_WSBEiJ_T0036884.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 91907329 92162336 + MGP_WSBEiJ_P0036884 Ssbp2 protein_coding protein_coding MGP_WSBEiJ_T0036885.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 91907365 91998602 + MGP_WSBEiJ_P0036885 Ssbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036886.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 91907398 92135357 + Ssbp2 protein_coding retained_intron MGP_WSBEiJ_T0036887.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 91907401 92024451 + Ssbp2 protein_coding retained_intron MGP_WSBEiJ_T0036888.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 91907419 91979991 + Ssbp2 protein_coding retained_intron MGP_WSBEiJ_T0036889.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 91907425 92163171 + MGP_WSBEiJ_P0036889 Ssbp2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036890.1 MGP_WSBEiJ_G0020127.1 mouse_genomes_project 13 92133383 92152527 + Ssbp2 protein_coding retained_intron MGP_WSBEiJ_T0006519.1 MGP_WSBEiJ_G0005401.1 mouse_genomes_project 13 97929583 97932320 + C430039J16Rik lincRNA lincRNA MGP_WSBEiJ_T0036553.1 MGP_WSBEiJ_G0020008.1 mouse_genomes_project 13 64550115 64558199 - MGP_WSBEiJ_P0036553 Prss47 protein_coding protein_coding MGP_WSBEiJ_T0036554.1 MGP_WSBEiJ_G0020008.1 mouse_genomes_project 13 64550424 64557286 - MGP_WSBEiJ_P0036554 Prss47 protein_coding protein_coding MGP_WSBEiJ_T0006448.1 MGP_WSBEiJ_G0005352.1 mouse_genomes_project 13 32904010 32923248 + Gm16984 lincRNA lincRNA MGP_WSBEiJ_T0097283.1 MGP_WSBEiJ_G0035960.1 mouse_genomes_project 13 62876161 62879722 - Gm16132 sense_intronic sense_intronic MGP_WSBEiJ_T0035643.1 MGP_WSBEiJ_G0019676.1 mouse_genomes_project 13 20827868 20828259 - MGP_WSBEiJ_P0035643 Hist1h4f protein_coding protein_coding MGP_WSBEiJ_T0037076.1 MGP_WSBEiJ_G0020196.1 mouse_genomes_project 13 100678608 100680762 - MGP_WSBEiJ_P0037076 Cartpt protein_coding protein_coding MGP_WSBEiJ_T0009804.1 MGP_WSBEiJ_G0007961.1 mouse_genomes_project 13 96983165 96983278 + Gm25213 miRNA miRNA MGP_WSBEiJ_T0037239.1 MGP_WSBEiJ_G0020241.1 mouse_genomes_project 13 109386427 109464653 + MGP_WSBEiJ_P0037239 Elovl7 protein_coding protein_coding MGP_WSBEiJ_T0012589.1 MGP_WSBEiJ_G0010719.1 mouse_genomes_project 13 8542923 8543909 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097800.1 MGP_WSBEiJ_G0036463.1 mouse_genomes_project 13 21808209 21808312 - Gm22013 snRNA snRNA MGP_WSBEiJ_T0099054.1 MGP_WSBEiJ_G0037717.1 mouse_genomes_project 13 55975582 55975711 - Gm22777 snoRNA snoRNA MGP_WSBEiJ_T0099055.1 MGP_WSBEiJ_G0037718.1 mouse_genomes_project 13 57513896 57514038 + Gm24284 snoRNA snoRNA MGP_WSBEiJ_T0009772.1 MGP_WSBEiJ_G0007929.1 mouse_genomes_project 13 36103212 36103328 + Gm27387 miRNA miRNA MGP_WSBEiJ_T0009780.1 MGP_WSBEiJ_G0007937.1 mouse_genomes_project 13 53464810 53464947 + Gm24195 miRNA miRNA MGP_WSBEiJ_T0037340.1 MGP_WSBEiJ_G0020275.1 mouse_genomes_project 13 116451917 116606099 - MGP_WSBEiJ_P0037340 Itga1 protein_coding protein_coding MGP_WSBEiJ_T0035626.1 MGP_WSBEiJ_G0019665.1 mouse_genomes_project 13 20294702 20295605 + MGP_WSBEiJ_P0035626 Vmn1r215 protein_coding protein_coding MGP_WSBEiJ_T0035901.1 MGP_WSBEiJ_G0019791.1 mouse_genomes_project 13 35323407 35396254 + MGP_WSBEiJ_P0035901 Ly86 protein_coding protein_coding MGP_WSBEiJ_T0036396.1 MGP_WSBEiJ_G0019952.1 mouse_genomes_project 13 57254613 57263849 - MGP_WSBEiJ_P0036396 Hnrnpa0 protein_coding protein_coding MGP_WSBEiJ_T0096949.1 MGP_WSBEiJ_G0035630.1 mouse_genomes_project 13 51748936 51749048 - n-R5s54 rRNA rRNA MGP_WSBEiJ_T0035759.1 MGP_WSBEiJ_G0019729.1 mouse_genomes_project 13 24957987 24964805 - MGP_WSBEiJ_P0035759 Prl8a8 protein_coding protein_coding MGP_WSBEiJ_T0035760.1 MGP_WSBEiJ_G0019729.1 mouse_genomes_project 13 24958090 24964803 - MGP_WSBEiJ_P0035760 Prl8a8 protein_coding protein_coding MGP_WSBEiJ_T0036101.1 MGP_WSBEiJ_G0019866.1 mouse_genomes_project 13 48209522 48225965 + MGP_WSBEiJ_P0036101 Ogn protein_coding protein_coding MGP_WSBEiJ_T0037229.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327389 109367453 + MGP_WSBEiJ_P0037229 Ercc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037230.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327396 109332342 + Ercc8 protein_coding retained_intron MGP_WSBEiJ_T0037231.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327396 109367070 + MGP_WSBEiJ_P0037231 Ercc8 protein_coding protein_coding MGP_WSBEiJ_T0037232.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327396 109343310 + MGP_WSBEiJ_P0037232 Ercc8 protein_coding protein_coding MGP_WSBEiJ_T0037233.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327396 109347408 + MGP_WSBEiJ_P0037233 Ercc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037234.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327412 109367070 + MGP_WSBEiJ_P0037234 Ercc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037235.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327429 109367062 + MGP_WSBEiJ_P0037235 Ercc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037236.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327433 109341817 + MGP_WSBEiJ_P0037236 Ercc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037237.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327461 109354719 + MGP_WSBEiJ_P0037237 Ercc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037238.1 MGP_WSBEiJ_G0020240.1 mouse_genomes_project 13 109327462 109348824 + MGP_WSBEiJ_P0037238 Ercc8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0009789.1 MGP_WSBEiJ_G0007946.1 mouse_genomes_project 13 61690636 61690742 - Gm22256 miRNA miRNA MGP_WSBEiJ_T0036333.1 MGP_WSBEiJ_G0019928.1 mouse_genomes_project 13 54500201 54532010 - MGP_WSBEiJ_P0036333 Fam193b protein_coding protein_coding MGP_WSBEiJ_T0036271.1 MGP_WSBEiJ_G0019909.1 mouse_genomes_project 13 53935222 54021965 - MGP_WSBEiJ_P0036271 Uimc1 protein_coding protein_coding MGP_WSBEiJ_T0036272.1 MGP_WSBEiJ_G0019909.1 mouse_genomes_project 13 53935222 54021970 - MGP_WSBEiJ_P0036272 Uimc1 protein_coding protein_coding MGP_WSBEiJ_T0036273.1 MGP_WSBEiJ_G0019909.1 mouse_genomes_project 13 53935537 54021924 - MGP_WSBEiJ_P0036273 Uimc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036274.1 MGP_WSBEiJ_G0019909.1 mouse_genomes_project 13 53935637 54021970 - MGP_WSBEiJ_P0036274 Uimc1 protein_coding protein_coding MGP_WSBEiJ_T0036275.1 MGP_WSBEiJ_G0019909.1 mouse_genomes_project 13 53990017 54021969 - Uimc1 protein_coding retained_intron MGP_WSBEiJ_T0036276.1 MGP_WSBEiJ_G0019909.1 mouse_genomes_project 13 54000297 54009431 - Uimc1 protein_coding retained_intron MGP_WSBEiJ_T0036682.1 MGP_WSBEiJ_G0020072.1 mouse_genomes_project 13 73608231 73631422 - MGP_WSBEiJ_P0036682 Slc6a19 protein_coding protein_coding MGP_WSBEiJ_T0036683.1 MGP_WSBEiJ_G0020072.1 mouse_genomes_project 13 73608233 73631337 - Slc6a19 protein_coding retained_intron MGP_WSBEiJ_T0036684.1 MGP_WSBEiJ_G0020072.1 mouse_genomes_project 13 73608233 73621115 - Slc6a19 protein_coding processed_transcript MGP_WSBEiJ_T0036685.1 MGP_WSBEiJ_G0020072.1 mouse_genomes_project 13 73617568 73635516 - Slc6a19 protein_coding processed_transcript MGP_WSBEiJ_T0036686.1 MGP_WSBEiJ_G0020072.1 mouse_genomes_project 13 73618050 73620858 - Slc6a19 protein_coding processed_transcript MGP_WSBEiJ_T0036687.1 MGP_WSBEiJ_G0020072.1 mouse_genomes_project 13 73618219 73631323 - MGP_WSBEiJ_P0036687 Slc6a19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036688.1 MGP_WSBEiJ_G0020072.1 mouse_genomes_project 13 73618257 73620735 - Slc6a19 protein_coding processed_transcript MGP_WSBEiJ_T0036128.1 MGP_WSBEiJ_G0019873.1 mouse_genomes_project 13 49828984 49833135 + MGP_WSBEiJ_P0036128 Nxnl2 protein_coding protein_coding MGP_WSBEiJ_T0100555.1 MGP_WSBEiJ_G0039013.1 mouse_genomes_project 13 30960384 31055870 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036304.1 MGP_WSBEiJ_G0019921.1 mouse_genomes_project 13 54371694 54379606 - MGP_WSBEiJ_P0036304 protein_coding protein_coding MGP_WSBEiJ_T0036305.1 MGP_WSBEiJ_G0019921.1 mouse_genomes_project 13 54371696 54379581 - MGP_WSBEiJ_P0036305 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036306.1 MGP_WSBEiJ_G0019921.1 mouse_genomes_project 13 54371800 54379592 - MGP_WSBEiJ_P0036306 protein_coding protein_coding MGP_WSBEiJ_T0009791.1 MGP_WSBEiJ_G0007948.1 mouse_genomes_project 13 62795726 62795800 + Mir23b miRNA miRNA MGP_WSBEiJ_T0012649.1 MGP_WSBEiJ_G0010779.1 mouse_genomes_project 13 68533389 68534143 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036242.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675081 53678455 + MGP_WSBEiJ_P0036242 Eif4e1b protein_coding protein_coding MGP_WSBEiJ_T0036243.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675084 53677733 + MGP_WSBEiJ_P0036243 Eif4e1b protein_coding protein_coding MGP_WSBEiJ_T0036244.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675084 53677943 + MGP_WSBEiJ_P0036244 Eif4e1b protein_coding protein_coding MGP_WSBEiJ_T0036245.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675084 53678549 + MGP_WSBEiJ_P0036245 Eif4e1b protein_coding protein_coding MGP_WSBEiJ_T0036246.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675084 53678455 + MGP_WSBEiJ_P0036246 Eif4e1b protein_coding protein_coding MGP_WSBEiJ_T0036247.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675086 53678464 + MGP_WSBEiJ_P0036247 Eif4e1b protein_coding protein_coding MGP_WSBEiJ_T0036248.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675086 53678456 + MGP_WSBEiJ_P0036248 Eif4e1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036249.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675096 53680231 + MGP_WSBEiJ_P0036249 Eif4e1b protein_coding protein_coding MGP_WSBEiJ_T0036250.1 MGP_WSBEiJ_G0019905.1 mouse_genomes_project 13 53675103 53678556 + MGP_WSBEiJ_P0036250 Eif4e1b protein_coding protein_coding MGP_WSBEiJ_T0035754.1 MGP_WSBEiJ_G0019727.1 mouse_genomes_project 13 24824406 24831891 - MGP_WSBEiJ_P0035754 Prl2b1 protein_coding protein_coding MGP_WSBEiJ_T0035755.1 MGP_WSBEiJ_G0019727.1 mouse_genomes_project 13 24824406 24831891 - MGP_WSBEiJ_P0035755 Prl2b1 protein_coding protein_coding MGP_WSBEiJ_T0036582.1 MGP_WSBEiJ_G0020019.1 mouse_genomes_project 13 66484380 66549744 + MGP_WSBEiJ_P0036582 Ptdss1 protein_coding protein_coding MGP_WSBEiJ_T0037048.1 MGP_WSBEiJ_G0020182.1 mouse_genomes_project 13 98989350 98999370 + MGP_WSBEiJ_P0037048 Ankra2 protein_coding protein_coding MGP_WSBEiJ_T0037049.1 MGP_WSBEiJ_G0020182.1 mouse_genomes_project 13 98989401 98999853 + MGP_WSBEiJ_P0037049 Ankra2 protein_coding protein_coding MGP_WSBEiJ_T0037050.1 MGP_WSBEiJ_G0020182.1 mouse_genomes_project 13 98989404 98999855 + MGP_WSBEiJ_P0037050 Ankra2 protein_coding protein_coding MGP_WSBEiJ_T0037051.1 MGP_WSBEiJ_G0020182.1 mouse_genomes_project 13 98989469 99000687 + MGP_WSBEiJ_P0037051 Ankra2 protein_coding protein_coding MGP_WSBEiJ_T0037052.1 MGP_WSBEiJ_G0020182.1 mouse_genomes_project 13 98994366 98997404 + Ankra2 protein_coding retained_intron MGP_WSBEiJ_T0035726.1 MGP_WSBEiJ_G0019712.1 mouse_genomes_project 13 22255288 22287966 - MGP_WSBEiJ_P0035726 Aldh5a1 protein_coding protein_coding MGP_WSBEiJ_T0012652.1 MGP_WSBEiJ_G0010782.1 mouse_genomes_project 13 69781531 69781942 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035938.1 MGP_WSBEiJ_G0019807.1 mouse_genomes_project 13 39151778 39163661 + MGP_WSBEiJ_P0035938 Pak1ip1 protein_coding protein_coding MGP_WSBEiJ_T0035939.1 MGP_WSBEiJ_G0019807.1 mouse_genomes_project 13 39151779 39159264 + Pak1ip1 protein_coding retained_intron MGP_WSBEiJ_T0035940.1 MGP_WSBEiJ_G0019807.1 mouse_genomes_project 13 39151993 39163653 + Pak1ip1 protein_coding retained_intron MGP_WSBEiJ_T0035941.1 MGP_WSBEiJ_G0019807.1 mouse_genomes_project 13 39152015 39158912 + Pak1ip1 protein_coding processed_transcript MGP_WSBEiJ_T0035942.1 MGP_WSBEiJ_G0019807.1 mouse_genomes_project 13 39152021 39163665 + Pak1ip1 protein_coding retained_intron MGP_WSBEiJ_T0006531.1 MGP_WSBEiJ_G0005409.1 mouse_genomes_project 13 100293209 100298579 + Gm26559 lincRNA lincRNA MGP_WSBEiJ_T0036551.1 MGP_WSBEiJ_G0020006.1 mouse_genomes_project 13 64465878 64472768 + MGP_WSBEiJ_P0036551 Spata31 protein_coding protein_coding MGP_WSBEiJ_T0036487.1 MGP_WSBEiJ_G0019985.1 mouse_genomes_project 13 60580237 60590557 - MGP_WSBEiJ_P0036487 Cts8 protein_coding protein_coding MGP_WSBEiJ_T0009807.1 MGP_WSBEiJ_G0007964.1 mouse_genomes_project 13 110547353 110547434 + Mir582 miRNA miRNA MGP_WSBEiJ_T0012634.1 MGP_WSBEiJ_G0010764.1 mouse_genomes_project 13 39169836 39173758 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036400.1 MGP_WSBEiJ_G0019955.1 mouse_genomes_project 13 57417147 57460887 - MGP_WSBEiJ_P0036400 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036401.1 MGP_WSBEiJ_G0019955.1 mouse_genomes_project 13 57417153 57460941 - MGP_WSBEiJ_P0036401 protein_coding protein_coding MGP_WSBEiJ_T0036130.1 MGP_WSBEiJ_G0019875.1 mouse_genomes_project 13 50095758 50248118 - MGP_WSBEiJ_P0036130 Shc3 protein_coding protein_coding MGP_WSBEiJ_T0037266.1 MGP_WSBEiJ_G0020244.1 mouse_genomes_project 13 111287823 111517150 - MGP_WSBEiJ_P0037266 Rab3c protein_coding protein_coding MGP_WSBEiJ_T0012654.1 MGP_WSBEiJ_G0010784.1 mouse_genomes_project 13 73768173 73768607 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036725.1 MGP_WSBEiJ_G0020087.1 mouse_genomes_project 13 74321496 74325925 - MGP_WSBEiJ_P0036725 Lrrc14b protein_coding protein_coding MGP_WSBEiJ_T0097808.1 MGP_WSBEiJ_G0036471.1 mouse_genomes_project 13 40090741 40090845 + Gm22157 snRNA snRNA MGP_WSBEiJ_T0012627.1 MGP_WSBEiJ_G0010757.1 mouse_genomes_project 13 28721373 28723135 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036387.1 MGP_WSBEiJ_G0019950.1 mouse_genomes_project 13 56511717 57017986 - MGP_WSBEiJ_P0036387 Spock1 protein_coding protein_coding MGP_WSBEiJ_T0036388.1 MGP_WSBEiJ_G0019950.1 mouse_genomes_project 13 56511729 57017947 - MGP_WSBEiJ_P0036388 Spock1 protein_coding protein_coding MGP_WSBEiJ_T0036389.1 MGP_WSBEiJ_G0019950.1 mouse_genomes_project 13 56516607 57017947 - MGP_WSBEiJ_P0036389 Spock1 protein_coding protein_coding MGP_WSBEiJ_T0036390.1 MGP_WSBEiJ_G0019950.1 mouse_genomes_project 13 56519215 57017963 - MGP_WSBEiJ_P0036390 Spock1 protein_coding protein_coding MGP_WSBEiJ_T0036391.1 MGP_WSBEiJ_G0019950.1 mouse_genomes_project 13 56519793 57017259 - MGP_WSBEiJ_P0036391 Spock1 protein_coding protein_coding MGP_WSBEiJ_T0036392.1 MGP_WSBEiJ_G0019950.1 mouse_genomes_project 13 56524892 57017971 - Spock1 protein_coding retained_intron MGP_WSBEiJ_T0036702.1 MGP_WSBEiJ_G0020080.1 mouse_genomes_project 13 73988961 74014685 - MGP_WSBEiJ_P0036702 Cep72 protein_coding protein_coding MGP_WSBEiJ_T0012677.1 MGP_WSBEiJ_G0010807.1 mouse_genomes_project 13 112654433 112654906 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036129.1 MGP_WSBEiJ_G0019874.1 mouse_genomes_project 13 50072040 50087520 + MGP_WSBEiJ_P0036129 S1pr3 protein_coding protein_coding MGP_WSBEiJ_T0003401.1 MGP_WSBEiJ_G0003117.1 mouse_genomes_project 13 70364109 70366958 + 1700100L14Rik antisense antisense MGP_WSBEiJ_T0003402.1 MGP_WSBEiJ_G0003117.1 mouse_genomes_project 13 70364148 70366953 + 1700100L14Rik antisense antisense MGP_WSBEiJ_T0097284.1 MGP_WSBEiJ_G0035961.1 mouse_genomes_project 13 91815069 91815522 - Gm29540 sense_intronic sense_intronic MGP_WSBEiJ_T0036936.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93776354 93860473 + MGP_WSBEiJ_P0036936 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036937.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93776699 93840857 + MGP_WSBEiJ_P0036937 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036938.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93777092 93834211 + MGP_WSBEiJ_P0036938 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036939.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93777395 93878915 + MGP_WSBEiJ_P0036939 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036940.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93777699 93877504 + MGP_WSBEiJ_P0036940 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036941.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93777699 93877504 + MGP_WSBEiJ_P0036941 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036942.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93777755 93879024 + MGP_WSBEiJ_P0036942 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036943.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93777780 93840129 + MGP_WSBEiJ_P0036943 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036944.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93777874 93877540 + MGP_WSBEiJ_P0036944 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036945.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93777874 93877540 + MGP_WSBEiJ_P0036945 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036946.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93780631 93879363 + MGP_WSBEiJ_P0036946 Homer1 protein_coding protein_coding MGP_WSBEiJ_T0036947.1 MGP_WSBEiJ_G0020144.1 mouse_genomes_project 13 93857112 93880662 + MGP_WSBEiJ_P0036947 Homer1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099065.1 MGP_WSBEiJ_G0037728.1 mouse_genomes_project 13 82140190 82140321 + Gm24295 snoRNA snoRNA MGP_WSBEiJ_T0003399.1 MGP_WSBEiJ_G0003115.1 mouse_genomes_project 13 67498748 67547928 - 4930525G20Rik antisense antisense MGP_WSBEiJ_T0000847.1 MGP_WSBEiJ_G0000785.1 mouse_genomes_project 13 37338392 37338755 + TEC TEC MGP_WSBEiJ_T0000860.1 MGP_WSBEiJ_G0000798.1 mouse_genomes_project 13 90545330 90546149 + TEC TEC MGP_WSBEiJ_T0036210.1 MGP_WSBEiJ_G0019899.1 mouse_genomes_project 13 53479110 53499122 - MGP_WSBEiJ_P0036210 Cltb protein_coding protein_coding MGP_WSBEiJ_T0036211.1 MGP_WSBEiJ_G0019899.1 mouse_genomes_project 13 53480247 53485871 - MGP_WSBEiJ_P0036211 Cltb protein_coding protein_coding MGP_WSBEiJ_T0036212.1 MGP_WSBEiJ_G0019899.1 mouse_genomes_project 13 53480294 53499070 - MGP_WSBEiJ_P0036212 Cltb protein_coding protein_coding MGP_WSBEiJ_T0036213.1 MGP_WSBEiJ_G0019899.1 mouse_genomes_project 13 53482749 53499070 - Cltb protein_coding retained_intron MGP_WSBEiJ_T0037100.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101340730 101372262 - MGP_WSBEiJ_P0037100 Gtf2h2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037101.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101349134 101372485 - MGP_WSBEiJ_P0037101 Gtf2h2 protein_coding protein_coding MGP_WSBEiJ_T0037102.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101349364 101372291 - Gtf2h2 protein_coding retained_intron MGP_WSBEiJ_T0037103.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101349364 101372503 - MGP_WSBEiJ_P0037103 Gtf2h2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037104.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101357041 101360656 - Gtf2h2 protein_coding processed_transcript MGP_WSBEiJ_T0037105.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101359130 101361574 - Gtf2h2 protein_coding processed_transcript MGP_WSBEiJ_T0037106.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101361453 101372503 - MGP_WSBEiJ_P0037106 Gtf2h2 protein_coding protein_coding MGP_WSBEiJ_T0037107.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101367614 101372298 - Gtf2h2 protein_coding retained_intron MGP_WSBEiJ_T0037108.1 MGP_WSBEiJ_G0020202.1 mouse_genomes_project 13 101368706 101372477 - Gtf2h2 protein_coding processed_transcript MGP_WSBEiJ_T0035698.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21910565 22069687 + MGP_WSBEiJ_P0035698 Fam65b protein_coding protein_coding MGP_WSBEiJ_T0035699.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21945633 22033492 + Fam65b protein_coding retained_intron MGP_WSBEiJ_T0035700.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21945633 22037320 + MGP_WSBEiJ_P0035700 Fam65b protein_coding protein_coding MGP_WSBEiJ_T0035701.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21945650 22037216 + MGP_WSBEiJ_P0035701 Fam65b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035702.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21969763 22069687 + MGP_WSBEiJ_P0035702 Fam65b protein_coding protein_coding MGP_WSBEiJ_T0035703.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21969765 22003306 + Fam65b protein_coding retained_intron MGP_WSBEiJ_T0035704.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21969799 22028829 + MGP_WSBEiJ_P0035704 Fam65b protein_coding protein_coding MGP_WSBEiJ_T0035705.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21969811 22037320 + MGP_WSBEiJ_P0035705 Fam65b protein_coding protein_coding MGP_WSBEiJ_T0035706.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 21969828 22027054 + Fam65b protein_coding retained_intron MGP_WSBEiJ_T0035707.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 22004239 22009165 + Fam65b protein_coding retained_intron MGP_WSBEiJ_T0035708.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 22006776 22009161 + Fam65b protein_coding retained_intron MGP_WSBEiJ_T0035709.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 22020886 22025379 + Fam65b protein_coding retained_intron MGP_WSBEiJ_T0035710.1 MGP_WSBEiJ_G0019706.1 mouse_genomes_project 13 22041393 22048022 + Fam65b protein_coding retained_intron MGP_WSBEiJ_T0036021.1 MGP_WSBEiJ_G0019839.1 mouse_genomes_project 13 44913625 45064004 + MGP_WSBEiJ_P0036021 Cap2 protein_coding protein_coding MGP_WSBEiJ_T0036022.1 MGP_WSBEiJ_G0019839.1 mouse_genomes_project 13 44913902 45063997 + MGP_WSBEiJ_P0036022 Cap2 protein_coding protein_coding MGP_WSBEiJ_T0036023.1 MGP_WSBEiJ_G0019839.1 mouse_genomes_project 13 45053214 45060750 + Cap2 protein_coding processed_transcript MGP_WSBEiJ_T0037371.1 MGP_WSBEiJ_G0020288.1 mouse_genomes_project 13 121208913 121210036 - MGP_WSBEiJ_P0037371 3110070M22Rik protein_coding protein_coding MGP_WSBEiJ_T0037062.1 MGP_WSBEiJ_G0020188.1 mouse_genomes_project 13 99434903 99444700 - MGP_WSBEiJ_P0037062 Tmem171 protein_coding protein_coding MGP_WSBEiJ_T0037063.1 MGP_WSBEiJ_G0020188.1 mouse_genomes_project 13 99442176 99444634 - MGP_WSBEiJ_P0037063 Tmem171 protein_coding protein_coding MGP_WSBEiJ_T0036288.1 MGP_WSBEiJ_G0019911.1 mouse_genomes_project 13 54056863 54057450 - MGP_WSBEiJ_P0036288 Gm17617 protein_coding protein_coding MGP_WSBEiJ_T0003433.1 MGP_WSBEiJ_G0003132.1 mouse_genomes_project 13 105709850 105719925 + 2610204G07Rik antisense antisense MGP_WSBEiJ_T0016746.1 MGP_WSBEiJ_G0014663.1 mouse_genomes_project 13 19139093 19140653 + Gm11291 processed_transcript processed_transcript MGP_WSBEiJ_T0036796.1 MGP_WSBEiJ_G0020111.1 mouse_genomes_project 13 81879904 81894170 + MGP_WSBEiJ_P0036796 Cetn3 protein_coding protein_coding MGP_WSBEiJ_T0009783.1 MGP_WSBEiJ_G0007940.1 mouse_genomes_project 13 54467111 54467179 - Mir6945 miRNA miRNA MGP_WSBEiJ_T0035895.1 MGP_WSBEiJ_G0019787.1 mouse_genomes_project 13 33930211 34073563 - MGP_WSBEiJ_P0035895 Lyrm4 protein_coding protein_coding MGP_WSBEiJ_T0009755.1 MGP_WSBEiJ_G0007912.1 mouse_genomes_project 13 2351024 2351115 - Gm26043 miRNA miRNA MGP_WSBEiJ_T0036920.1 MGP_WSBEiJ_G0020134.1 mouse_genomes_project 13 92805032 92840430 + MGP_WSBEiJ_P0036920 Dhfr protein_coding protein_coding MGP_WSBEiJ_T0003432.1 MGP_WSBEiJ_G0003131.1 mouse_genomes_project 13 103732166 103735812 + Gm17160 antisense antisense MGP_WSBEiJ_T0035923.1 MGP_WSBEiJ_G0019799.1 mouse_genomes_project 13 36544644 36572874 - MGP_WSBEiJ_P0035923 Txndc5 protein_coding protein_coding MGP_WSBEiJ_T0035924.1 MGP_WSBEiJ_G0019799.1 mouse_genomes_project 13 36544726 36572380 - MGP_WSBEiJ_P0035924 Txndc5 protein_coding protein_coding MGP_WSBEiJ_T0035925.1 MGP_WSBEiJ_G0019799.1 mouse_genomes_project 13 36544730 36550397 - Txndc5 protein_coding retained_intron MGP_WSBEiJ_T0035665.1 MGP_WSBEiJ_G0019694.1 mouse_genomes_project 13 21058557 21059926 - MGP_WSBEiJ_P0035665 Hist1h3a protein_coding protein_coding MGP_WSBEiJ_T0036077.1 MGP_WSBEiJ_G0019856.1 mouse_genomes_project 13 47764221 47773111 + MGP_WSBEiJ_P0036077 Ninj1 protein_coding protein_coding MGP_WSBEiJ_T0036078.1 MGP_WSBEiJ_G0019856.1 mouse_genomes_project 13 47764378 47773111 + MGP_WSBEiJ_P0036078 Ninj1 protein_coding protein_coding MGP_WSBEiJ_T0036079.1 MGP_WSBEiJ_G0019856.1 mouse_genomes_project 13 47764389 47772626 + MGP_WSBEiJ_P0036079 Ninj1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036080.1 MGP_WSBEiJ_G0019856.1 mouse_genomes_project 13 47764620 47771791 + Ninj1 protein_coding processed_transcript MGP_WSBEiJ_T0036081.1 MGP_WSBEiJ_G0019856.1 mouse_genomes_project 13 47767162 47773111 + Ninj1 protein_coding processed_transcript MGP_WSBEiJ_T0036930.1 MGP_WSBEiJ_G0020139.1 mouse_genomes_project 13 93069516 93170118 + MGP_WSBEiJ_P0036930 Serinc5 protein_coding protein_coding MGP_WSBEiJ_T0036251.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53681149 53688536 + MGP_WSBEiJ_P0036251 Tspan17 protein_coding protein_coding MGP_WSBEiJ_T0036252.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53681175 53688528 + MGP_WSBEiJ_P0036252 Tspan17 protein_coding protein_coding MGP_WSBEiJ_T0036253.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53681235 53687946 + MGP_WSBEiJ_P0036253 Tspan17 protein_coding protein_coding MGP_WSBEiJ_T0036254.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53681367 53687877 + MGP_WSBEiJ_P0036254 Tspan17 protein_coding protein_coding MGP_WSBEiJ_T0036255.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53681367 53687981 + MGP_WSBEiJ_P0036255 Tspan17 protein_coding protein_coding MGP_WSBEiJ_T0036256.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53681417 53686907 + MGP_WSBEiJ_P0036256 Tspan17 protein_coding protein_coding MGP_WSBEiJ_T0036257.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53684504 53687924 + MGP_WSBEiJ_P0036257 Tspan17 protein_coding protein_coding MGP_WSBEiJ_T0036258.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53684635 53688535 + MGP_WSBEiJ_P0036258 Tspan17 protein_coding protein_coding MGP_WSBEiJ_T0036259.1 MGP_WSBEiJ_G0019906.1 mouse_genomes_project 13 53687142 53688528 + Tspan17 protein_coding retained_intron MGP_WSBEiJ_T0035326.1 MGP_WSBEiJ_G0019536.1 mouse_genomes_project 13 119610 140962 + MGP_WSBEiJ_P0035326 Asb13 protein_coding protein_coding MGP_WSBEiJ_T0035327.1 MGP_WSBEiJ_G0019536.1 mouse_genomes_project 13 119667 120361 + Asb13 protein_coding processed_transcript MGP_WSBEiJ_T0035328.1 MGP_WSBEiJ_G0019536.1 mouse_genomes_project 13 119676 139681 + Asb13 protein_coding processed_transcript MGP_WSBEiJ_T0035329.1 MGP_WSBEiJ_G0019536.1 mouse_genomes_project 13 119677 128470 + Asb13 protein_coding retained_intron MGP_WSBEiJ_T0035447.1 MGP_WSBEiJ_G0019572.1 mouse_genomes_project 13 9092126 9110733 - MGP_WSBEiJ_P0035447 Lgals8 protein_coding protein_coding MGP_WSBEiJ_T0035448.1 MGP_WSBEiJ_G0019572.1 mouse_genomes_project 13 9092131 9101466 - Lgals8 protein_coding retained_intron MGP_WSBEiJ_T0035449.1 MGP_WSBEiJ_G0019572.1 mouse_genomes_project 13 9093556 9113012 - MGP_WSBEiJ_P0035449 Lgals8 protein_coding protein_coding MGP_WSBEiJ_T0035450.1 MGP_WSBEiJ_G0019572.1 mouse_genomes_project 13 9102973 9108072 - Lgals8 protein_coding retained_intron MGP_WSBEiJ_T0035451.1 MGP_WSBEiJ_G0019572.1 mouse_genomes_project 13 9104291 9106562 - Lgals8 protein_coding retained_intron MGP_WSBEiJ_T0035452.1 MGP_WSBEiJ_G0019572.1 mouse_genomes_project 13 9110788 9112564 - Lgals8 protein_coding processed_transcript MGP_WSBEiJ_T0035600.1 MGP_WSBEiJ_G0019643.1 mouse_genomes_project 13 19103059 19111382 + MGP_WSBEiJ_P0035600 Pom121l2 protein_coding protein_coding MGP_WSBEiJ_T0035601.1 MGP_WSBEiJ_G0019643.1 mouse_genomes_project 13 19103385 19106345 + MGP_WSBEiJ_P0035601 Pom121l2 protein_coding protein_coding MGP_WSBEiJ_T0012658.1 MGP_WSBEiJ_G0010788.1 mouse_genomes_project 13 76713423 76714715 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006534.1 MGP_WSBEiJ_G0005412.1 mouse_genomes_project 13 102534318 102534934 - Gm29341 lincRNA lincRNA MGP_WSBEiJ_T0002544.1 MGP_WSBEiJ_G0002451.1 mouse_genomes_project 13 16124501 16125075 + MGP_WSBEiJ_P0002544 Tcrg-V6 TR_V_gene TR_V_gene MGP_WSBEiJ_T0002545.1 MGP_WSBEiJ_G0002451.1 mouse_genomes_project 13 16124513 16125075 + MGP_WSBEiJ_P0002545 Tcrg-V6 TR_V_gene TR_V_gene MGP_WSBEiJ_T0012633.1 MGP_WSBEiJ_G0010763.1 mouse_genomes_project 13 38922441 38923069 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036931.1 MGP_WSBEiJ_G0020140.1 mouse_genomes_project 13 93214214 93261545 - MGP_WSBEiJ_P0036931 Thbs4 protein_coding protein_coding MGP_WSBEiJ_T0036932.1 MGP_WSBEiJ_G0020140.1 mouse_genomes_project 13 93238565 93240381 - Thbs4 protein_coding retained_intron MGP_WSBEiJ_T0006506.1 MGP_WSBEiJ_G0005392.1 mouse_genomes_project 13 81875385 81880362 - Gm17259 lincRNA lincRNA MGP_WSBEiJ_T0100525.1 MGP_WSBEiJ_G0038983.1 mouse_genomes_project 13 19310563 19311329 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035752.1 MGP_WSBEiJ_G0019726.1 mouse_genomes_project 13 24792906 24809743 + MGP_WSBEiJ_P0035752 Prl8a2 protein_coding protein_coding MGP_WSBEiJ_T0035753.1 MGP_WSBEiJ_G0019726.1 mouse_genomes_project 13 24792912 24809731 + MGP_WSBEiJ_P0035753 Prl8a2 protein_coding protein_coding MGP_WSBEiJ_T0003400.1 MGP_WSBEiJ_G0003116.1 mouse_genomes_project 13 69300761 69301723 - A530095I07Rik antisense antisense MGP_WSBEiJ_T0037192.1 MGP_WSBEiJ_G0020226.1 mouse_genomes_project 13 105658065 105844704 - MGP_WSBEiJ_P0037192 Cwc27 protein_coding protein_coding MGP_WSBEiJ_T0037193.1 MGP_WSBEiJ_G0020226.1 mouse_genomes_project 13 105772115 105818972 - Cwc27 protein_coding processed_transcript MGP_WSBEiJ_T0037194.1 MGP_WSBEiJ_G0020226.1 mouse_genomes_project 13 105816756 105819007 - Cwc27 protein_coding processed_transcript MGP_WSBEiJ_T0037196.1 MGP_WSBEiJ_G0020226.1 mouse_genomes_project 13 105835498 105844893 - MGP_WSBEiJ_P0037196 Cwc27 protein_coding protein_coding MGP_WSBEiJ_T0016745.1 MGP_WSBEiJ_G0014662.1 mouse_genomes_project 13 18499840 18505299 + 4930470G03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0003388.1 MGP_WSBEiJ_G0003110.1 mouse_genomes_project 13 57467918 57484490 + Gm26555 antisense antisense MGP_WSBEiJ_T0003389.1 MGP_WSBEiJ_G0003110.1 mouse_genomes_project 13 57467918 57487046 + Gm26555 antisense antisense MGP_WSBEiJ_T0003390.1 MGP_WSBEiJ_G0003110.1 mouse_genomes_project 13 57467926 57487047 + Gm26555 antisense antisense MGP_WSBEiJ_T0096948.1 MGP_WSBEiJ_G0035629.1 mouse_genomes_project 13 44930411 44930489 + Gm24915 rRNA rRNA MGP_WSBEiJ_T0006502.1 MGP_WSBEiJ_G0005390.1 mouse_genomes_project 13 81032803 81040041 - Gm4211 lincRNA lincRNA MGP_WSBEiJ_T0035378.1 MGP_WSBEiJ_G0019558.1 mouse_genomes_project 13 4745797 5311383 + MGP_WSBEiJ_P0035378 Adarb2 protein_coding protein_coding MGP_WSBEiJ_T0035379.1 MGP_WSBEiJ_G0019558.1 mouse_genomes_project 13 4745839 4884916 + MGP_WSBEiJ_P0035379 Adarb2 protein_coding protein_coding MGP_WSBEiJ_T0035380.1 MGP_WSBEiJ_G0019558.1 mouse_genomes_project 13 4745844 5314446 + MGP_WSBEiJ_P0035380 Adarb2 protein_coding protein_coding MGP_WSBEiJ_T0035381.1 MGP_WSBEiJ_G0019558.1 mouse_genomes_project 13 5093332 5307238 + MGP_WSBEiJ_P0035381 Adarb2 protein_coding protein_coding MGP_WSBEiJ_T0012587.1 MGP_WSBEiJ_G0010717.1 mouse_genomes_project 13 5695579 5695730 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000872.1 MGP_WSBEiJ_G0000810.1 mouse_genomes_project 13 113570798 113572420 + TEC TEC MGP_WSBEiJ_T0097811.1 MGP_WSBEiJ_G0036474.1 mouse_genomes_project 13 43346342 43346446 - Gm23104 snRNA snRNA MGP_WSBEiJ_T0035913.1 MGP_WSBEiJ_G0019793.1 mouse_genomes_project 13 35988128 36010999 - MGP_WSBEiJ_P0035913 Ssr1 protein_coding protein_coding MGP_WSBEiJ_T0035988.1 MGP_WSBEiJ_G0019827.1 mouse_genomes_project 13 41801629 41821641 - MGP_WSBEiJ_P0035988 Mcur1 protein_coding protein_coding MGP_WSBEiJ_T0100540.1 MGP_WSBEiJ_G0038998.1 mouse_genomes_project 13 20080198 20080633 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036935.1 MGP_WSBEiJ_G0020143.1 mouse_genomes_project 13 93622558 93669704 - MGP_WSBEiJ_P0036935 Papd4 protein_coding protein_coding MGP_WSBEiJ_T0037061.1 MGP_WSBEiJ_G0020187.1 mouse_genomes_project 13 99378052 99380491 - MGP_WSBEiJ_P0037061 Tmem174 protein_coding protein_coding MGP_WSBEiJ_T0012597.1 MGP_WSBEiJ_G0010727.1 mouse_genomes_project 13 18993231 18994228 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012681.1 MGP_WSBEiJ_G0010811.1 mouse_genomes_project 13 114506995 114507254 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036727.1 MGP_WSBEiJ_G0020089.1 mouse_genomes_project 13 74624854 74675004 + MGP_WSBEiJ_P0036727 Erap1 protein_coding protein_coding MGP_WSBEiJ_T0035565.1 MGP_WSBEiJ_G0019619.1 mouse_genomes_project 13 18574253 18592177 - MGP_WSBEiJ_P0035565 Zkscan8 protein_coding protein_coding MGP_WSBEiJ_T0035566.1 MGP_WSBEiJ_G0019619.1 mouse_genomes_project 13 18582862 18592089 - MGP_WSBEiJ_P0035566 Zkscan8 protein_coding protein_coding MGP_WSBEiJ_T0035567.1 MGP_WSBEiJ_G0019619.1 mouse_genomes_project 13 18587480 18592130 - MGP_WSBEiJ_P0035567 Zkscan8 protein_coding protein_coding MGP_WSBEiJ_T0035590.1 MGP_WSBEiJ_G0019638.1 mouse_genomes_project 13 18860008 18861867 + MGP_WSBEiJ_P0035590 Hist1h2bp protein_coding protein_coding MGP_WSBEiJ_T0006541.1 MGP_WSBEiJ_G0005418.1 mouse_genomes_project 13 113196367 113200357 + Gm15326 lincRNA lincRNA MGP_WSBEiJ_T0006542.1 MGP_WSBEiJ_G0005418.1 mouse_genomes_project 13 113199559 113203150 + Gm15326 lincRNA lincRNA MGP_WSBEiJ_T0037122.1 MGP_WSBEiJ_G0020210.1 mouse_genomes_project 13 101631355 101639469 - MGP_WSBEiJ_P0037122 Mrps36 protein_coding protein_coding MGP_WSBEiJ_T0037123.1 MGP_WSBEiJ_G0020210.1 mouse_genomes_project 13 101631471 101638941 - Mrps36 protein_coding processed_transcript MGP_WSBEiJ_T0037124.1 MGP_WSBEiJ_G0020210.1 mouse_genomes_project 13 101631494 101639398 - Mrps36 protein_coding processed_transcript MGP_WSBEiJ_T0037125.1 MGP_WSBEiJ_G0020210.1 mouse_genomes_project 13 101631522 101638924 - Mrps36 protein_coding processed_transcript MGP_WSBEiJ_T0037126.1 MGP_WSBEiJ_G0020210.1 mouse_genomes_project 13 101638242 101638923 - Mrps36 protein_coding processed_transcript MGP_WSBEiJ_T0036835.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85429854 85509073 - MGP_WSBEiJ_P0036835 Rasa1 protein_coding protein_coding MGP_WSBEiJ_T0036836.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85429860 85476531 - MGP_WSBEiJ_P0036836 Rasa1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036837.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85430889 85433426 - Rasa1 protein_coding retained_intron MGP_WSBEiJ_T0036838.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85431126 85436782 - Rasa1 protein_coding retained_intron MGP_WSBEiJ_T0036839.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85436451 85441772 - Rasa1 protein_coding retained_intron MGP_WSBEiJ_T0036840.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85439278 85441082 - Rasa1 protein_coding retained_intron MGP_WSBEiJ_T0036841.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85443748 85446123 - Rasa1 protein_coding retained_intron MGP_WSBEiJ_T0036842.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85444341 85445529 - Rasa1 protein_coding retained_intron MGP_WSBEiJ_T0036843.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85453275 85462366 - Rasa1 protein_coding retained_intron MGP_WSBEiJ_T0036844.1 MGP_WSBEiJ_G0020116.1 mouse_genomes_project 13 85459410 85466034 - Rasa1 protein_coding retained_intron MGP_WSBEiJ_T0100526.1 MGP_WSBEiJ_G0038984.1 mouse_genomes_project 13 19447453 19448320 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035662.1 MGP_WSBEiJ_G0019691.1 mouse_genomes_project 13 21048971 21049591 + MGP_WSBEiJ_P0035662 Hist1h3b protein_coding protein_coding MGP_WSBEiJ_T0097823.1 MGP_WSBEiJ_G0036486.1 mouse_genomes_project 13 96719309 96719409 - Gm23955 snRNA snRNA MGP_WSBEiJ_T0012590.1 MGP_WSBEiJ_G0010720.1 mouse_genomes_project 13 13950595 13951553 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011153.1 MGP_WSBEiJ_G0009310.1 mouse_genomes_project 13 43627360 43627703 - Gm23755 misc_RNA misc_RNA MGP_WSBEiJ_T0037316.1 MGP_WSBEiJ_G0020264.1 mouse_genomes_project 13 114491595 114498750 - MGP_WSBEiJ_P0037316 Gzma protein_coding protein_coding MGP_WSBEiJ_T0035404.1 MGP_WSBEiJ_G0019562.1 mouse_genomes_project 13 5489722 5497642 + MGP_WSBEiJ_P0035404 protein_coding protein_coding MGP_WSBEiJ_T0035405.1 MGP_WSBEiJ_G0019562.1 mouse_genomes_project 13 5494535 5497512 + MGP_WSBEiJ_P0035405 protein_coding protein_coding MGP_WSBEiJ_T0035739.1 MGP_WSBEiJ_G0019717.1 mouse_genomes_project 13 24162857 24164882 - MGP_WSBEiJ_P0035739 Hdgfl1 protein_coding protein_coding MGP_WSBEiJ_T0035607.1 MGP_WSBEiJ_G0019646.1 mouse_genomes_project 13 19164897 19165296 - MGP_WSBEiJ_P0035607 Hist1h4m protein_coding protein_coding MGP_WSBEiJ_T0003373.1 MGP_WSBEiJ_G0003099.1 mouse_genomes_project 13 31842901 31845654 + 1110046J04Rik antisense antisense MGP_WSBEiJ_T0003374.1 MGP_WSBEiJ_G0003099.1 mouse_genomes_project 13 31843154 31843930 + 1110046J04Rik antisense antisense MGP_WSBEiJ_T0003375.1 MGP_WSBEiJ_G0003099.1 mouse_genomes_project 13 31843350 31871081 + 1110046J04Rik antisense antisense MGP_WSBEiJ_T0035631.1 MGP_WSBEiJ_G0019670.1 mouse_genomes_project 13 20578068 20595485 - MGP_WSBEiJ_P0035631 Zfp322a protein_coding protein_coding MGP_WSBEiJ_T0035632.1 MGP_WSBEiJ_G0019670.1 mouse_genomes_project 13 20583307 20595277 - MGP_WSBEiJ_P0035632 Zfp322a protein_coding protein_coding MGP_WSBEiJ_T0035633.1 MGP_WSBEiJ_G0019670.1 mouse_genomes_project 13 20583308 20595478 - MGP_WSBEiJ_P0035633 Zfp322a protein_coding protein_coding MGP_WSBEiJ_T0035634.1 MGP_WSBEiJ_G0019670.1 mouse_genomes_project 13 20583469 20595471 - MGP_WSBEiJ_P0035634 Zfp322a protein_coding protein_coding MGP_WSBEiJ_T0009811.1 MGP_WSBEiJ_G0007968.1 mouse_genomes_project 13 114430420 114430511 + Mir449a miRNA miRNA MGP_WSBEiJ_T0097812.1 MGP_WSBEiJ_G0036475.1 mouse_genomes_project 13 43834815 43834922 - Gm23387 snRNA snRNA MGP_WSBEiJ_T0006472.1 MGP_WSBEiJ_G0005371.1 mouse_genomes_project 13 52210142 52214435 + Gm2762 lincRNA lincRNA MGP_WSBEiJ_T0006473.1 MGP_WSBEiJ_G0005371.1 mouse_genomes_project 13 52210158 52270576 + Gm2762 lincRNA lincRNA MGP_WSBEiJ_T0006474.1 MGP_WSBEiJ_G0005371.1 mouse_genomes_project 13 52210174 52271666 + Gm2762 lincRNA lincRNA MGP_WSBEiJ_T0006475.1 MGP_WSBEiJ_G0005371.1 mouse_genomes_project 13 52210582 52211824 + Gm2762 lincRNA lincRNA MGP_WSBEiJ_T0006476.1 MGP_WSBEiJ_G0005371.1 mouse_genomes_project 13 52210776 52219078 + Gm2762 lincRNA lincRNA MGP_WSBEiJ_T0006477.1 MGP_WSBEiJ_G0005371.1 mouse_genomes_project 13 52210776 52214631 + Gm2762 lincRNA lincRNA MGP_WSBEiJ_T0006478.1 MGP_WSBEiJ_G0005371.1 mouse_genomes_project 13 52211820 52214647 + Gm2762 lincRNA lincRNA MGP_WSBEiJ_T0006479.1 MGP_WSBEiJ_G0005371.1 mouse_genomes_project 13 52216892 52219559 + Gm2762 lincRNA lincRNA MGP_WSBEiJ_T0035793.1 MGP_WSBEiJ_G0019745.1 mouse_genomes_project 13 28016586 28026054 + Agtr1a protein_coding processed_transcript MGP_WSBEiJ_T0035794.1 MGP_WSBEiJ_G0019745.1 mouse_genomes_project 13 28016586 28058079 + MGP_WSBEiJ_P0035794 Agtr1a protein_coding protein_coding MGP_WSBEiJ_T0012668.1 MGP_WSBEiJ_G0010798.1 mouse_genomes_project 13 90024264 90024865 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036347.1 MGP_WSBEiJ_G0019935.1 mouse_genomes_project 13 54711192 54762949 + MGP_WSBEiJ_P0036347 Pcbd2 protein_coding protein_coding MGP_WSBEiJ_T0036348.1 MGP_WSBEiJ_G0019935.1 mouse_genomes_project 13 54711192 54762947 + MGP_WSBEiJ_P0036348 Pcbd2 protein_coding protein_coding MGP_WSBEiJ_T0012595.1 MGP_WSBEiJ_G0010725.1 mouse_genomes_project 13 18435704 18436144 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003371.1 MGP_WSBEiJ_G0003097.1 mouse_genomes_project 13 27585321 27587300 + Gm11365 antisense antisense MGP_WSBEiJ_T0035762.1 MGP_WSBEiJ_G0019731.1 mouse_genomes_project 13 25023424 25033279 - MGP_WSBEiJ_P0035762 Prl8a1 protein_coding protein_coding MGP_WSBEiJ_T0035763.1 MGP_WSBEiJ_G0019731.1 mouse_genomes_project 13 25023934 25033279 - MGP_WSBEiJ_P0035763 Prl8a1 protein_coding protein_coding MGP_WSBEiJ_T0099071.1 MGP_WSBEiJ_G0037734.1 mouse_genomes_project 13 100480026 100480157 - Gm24471 snoRNA snoRNA MGP_WSBEiJ_T0035833.1 MGP_WSBEiJ_G0019768.1 mouse_genomes_project 13 31744678 31755685 - MGP_WSBEiJ_P0035833 Serpinb6e protein_coding protein_coding MGP_WSBEiJ_T0035834.1 MGP_WSBEiJ_G0019768.1 mouse_genomes_project 13 31753279 31755685 - MGP_WSBEiJ_P0035834 Serpinb6e protein_coding protein_coding MGP_WSBEiJ_T0000843.1 MGP_WSBEiJ_G0000782.1 mouse_genomes_project 13 16371651 16373977 - TEC TEC MGP_WSBEiJ_T0037120.1 MGP_WSBEiJ_G0020208.1 mouse_genomes_project 13 101557189 101588505 + MGP_WSBEiJ_P0037120 Ccdc125 protein_coding protein_coding MGP_WSBEiJ_T0036632.1 MGP_WSBEiJ_G0020048.1 mouse_genomes_project 13 67582989 67584916 + MGP_WSBEiJ_P0036632 BC048507 protein_coding protein_coding MGP_WSBEiJ_T0036237.1 MGP_WSBEiJ_G0019903.1 mouse_genomes_project 13 53629549 53645410 - MGP_WSBEiJ_P0036237 Gprin1 protein_coding protein_coding MGP_WSBEiJ_T0000873.1 MGP_WSBEiJ_G0000811.1 mouse_genomes_project 13 115672830 115685000 + TEC TEC MGP_WSBEiJ_T0012673.1 MGP_WSBEiJ_G0010803.1 mouse_genomes_project 13 101922263 101923266 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036827.1 MGP_WSBEiJ_G0020114.1 mouse_genomes_project 13 85341407 85343236 - MGP_WSBEiJ_P0036827 Gm4076 protein_coding protein_coding MGP_WSBEiJ_T0037225.1 MGP_WSBEiJ_G0020236.1 mouse_genomes_project 13 108136901 108138610 + MGP_WSBEiJ_P0037225 3830408C21Rik protein_coding protein_coding MGP_WSBEiJ_T0011165.1 MGP_WSBEiJ_G0009322.1 mouse_genomes_project 13 109692105 109692298 - Gm28016 misc_RNA misc_RNA MGP_WSBEiJ_T0036349.1 MGP_WSBEiJ_G0019936.1 mouse_genomes_project 13 54765989 54792701 + MGP_WSBEiJ_P0036349 Catsper3 protein_coding protein_coding MGP_WSBEiJ_T0036350.1 MGP_WSBEiJ_G0019936.1 mouse_genomes_project 13 54766000 54792732 + MGP_WSBEiJ_P0036350 Catsper3 protein_coding protein_coding MGP_WSBEiJ_T0036596.1 MGP_WSBEiJ_G0020028.1 mouse_genomes_project 13 66735249 66780841 + MGP_WSBEiJ_P0036596 protein_coding protein_coding MGP_WSBEiJ_T0009759.1 MGP_WSBEiJ_G0007916.1 mouse_genomes_project 13 7197307 7197388 - Gm23415 miRNA miRNA MGP_WSBEiJ_T0036607.1 MGP_WSBEiJ_G0020034.1 mouse_genomes_project 13 66907128 66929281 - MGP_WSBEiJ_P0036607 Zfp953 protein_coding protein_coding MGP_WSBEiJ_T0036053.1 MGP_WSBEiJ_G0019848.1 mouse_genomes_project 13 46771277 46773886 + MGP_WSBEiJ_P0036053 Id4 protein_coding protein_coding MGP_WSBEiJ_T0036062.1 MGP_WSBEiJ_G0019851.1 mouse_genomes_project 13 47117276 47164675 - MGP_WSBEiJ_P0036062 Ptpdc1 protein_coding protein_coding MGP_WSBEiJ_T0035586.1 MGP_WSBEiJ_G0019634.1 mouse_genomes_project 13 18850343 18851086 - MGP_WSBEiJ_P0035586 Hist1h1b protein_coding protein_coding MGP_WSBEiJ_T0016766.1 MGP_WSBEiJ_G0014675.1 mouse_genomes_project 13 80955305 80956642 - 1700023H06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0035897.1 MGP_WSBEiJ_G0019789.1 mouse_genomes_project 13 34705302 34714956 - MGP_WSBEiJ_P0035897 Nrn1 protein_coding protein_coding MGP_WSBEiJ_T0035898.1 MGP_WSBEiJ_G0019789.1 mouse_genomes_project 13 34706134 34711178 - MGP_WSBEiJ_P0035898 Nrn1 protein_coding protein_coding MGP_WSBEiJ_T0035574.1 MGP_WSBEiJ_G0019624.1 mouse_genomes_project 13 18675714 18676698 - MGP_WSBEiJ_P0035574 Olfr1362 protein_coding protein_coding MGP_WSBEiJ_T0036307.1 MGP_WSBEiJ_G0019922.1 mouse_genomes_project 13 54398490 54415401 + MGP_WSBEiJ_P0036307 Grk6 protein_coding protein_coding MGP_WSBEiJ_T0036308.1 MGP_WSBEiJ_G0019922.1 mouse_genomes_project 13 54398665 54415661 + MGP_WSBEiJ_P0036308 Grk6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0016770.1 MGP_WSBEiJ_G0014678.1 mouse_genomes_project 13 112892136 112962842 + Gm15286 processed_transcript processed_transcript MGP_WSBEiJ_T0016771.1 MGP_WSBEiJ_G0014678.1 mouse_genomes_project 13 112932835 112960847 + Gm15286 processed_transcript processed_transcript MGP_WSBEiJ_T0035801.1 MGP_WSBEiJ_G0019749.1 mouse_genomes_project 13 28516204 28655273 - MGP_WSBEiJ_P0035801 Exoc2 protein_coding protein_coding MGP_WSBEiJ_T0035802.1 MGP_WSBEiJ_G0019749.1 mouse_genomes_project 13 28516204 28680314 - MGP_WSBEiJ_P0035802 Exoc2 protein_coding protein_coding MGP_WSBEiJ_T0036339.1 MGP_WSBEiJ_G0019931.1 mouse_genomes_project 13 54592152 54601577 + MGP_WSBEiJ_P0036339 Caml protein_coding protein_coding MGP_WSBEiJ_T0036340.1 MGP_WSBEiJ_G0019931.1 mouse_genomes_project 13 54592345 54594394 + Caml protein_coding retained_intron MGP_WSBEiJ_T0036341.1 MGP_WSBEiJ_G0019931.1 mouse_genomes_project 13 54597142 54601577 + Caml protein_coding retained_intron MGP_WSBEiJ_T0035808.1 MGP_WSBEiJ_G0019755.1 mouse_genomes_project 13 29533825 29537773 + MGP_WSBEiJ_P0035808 Foxc1 protein_coding protein_coding MGP_WSBEiJ_T0036994.1 MGP_WSBEiJ_G0020160.1 mouse_genomes_project 13 96015690 96030109 - MGP_WSBEiJ_P0036994 Crhbp protein_coding protein_coding MGP_WSBEiJ_T0035577.1 MGP_WSBEiJ_G0019626.1 mouse_genomes_project 13 18715675 18716629 - MGP_WSBEiJ_P0035577 Olfr1361 protein_coding protein_coding MGP_WSBEiJ_T0037240.1 MGP_WSBEiJ_G0020242.1 mouse_genomes_project 13 109498822 109574671 + MGP_WSBEiJ_P0037240 Depdc1b protein_coding protein_coding MGP_WSBEiJ_T0037241.1 MGP_WSBEiJ_G0020242.1 mouse_genomes_project 13 109498858 109507006 + Depdc1b protein_coding retained_intron MGP_WSBEiJ_T0037242.1 MGP_WSBEiJ_G0020242.1 mouse_genomes_project 13 109498870 109587846 + MGP_WSBEiJ_P0037242 Depdc1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037243.1 MGP_WSBEiJ_G0020242.1 mouse_genomes_project 13 109498912 109573799 + MGP_WSBEiJ_P0037243 Depdc1b protein_coding protein_coding MGP_WSBEiJ_T0037244.1 MGP_WSBEiJ_G0020242.1 mouse_genomes_project 13 109509056 109553114 + Depdc1b protein_coding processed_transcript MGP_WSBEiJ_T0037245.1 MGP_WSBEiJ_G0020242.1 mouse_genomes_project 13 109540501 109558195 + Depdc1b protein_coding retained_intron MGP_WSBEiJ_T0036054.1 MGP_WSBEiJ_G0019849.1 mouse_genomes_project 13 47018731 47049301 - MGP_WSBEiJ_P0036054 Zfp169 protein_coding protein_coding MGP_WSBEiJ_T0036055.1 MGP_WSBEiJ_G0019849.1 mouse_genomes_project 13 47018743 47049259 - MGP_WSBEiJ_P0036055 Zfp169 protein_coding protein_coding MGP_WSBEiJ_T0036056.1 MGP_WSBEiJ_G0019849.1 mouse_genomes_project 13 47020286 47039603 - MGP_WSBEiJ_P0036056 Zfp169 protein_coding protein_coding MGP_WSBEiJ_T0036057.1 MGP_WSBEiJ_G0019849.1 mouse_genomes_project 13 47020538 47039603 - MGP_WSBEiJ_P0036057 Zfp169 protein_coding protein_coding MGP_WSBEiJ_T0036058.1 MGP_WSBEiJ_G0019849.1 mouse_genomes_project 13 47022336 47049275 - MGP_WSBEiJ_P0036058 Zfp169 protein_coding protein_coding MGP_WSBEiJ_T0036059.1 MGP_WSBEiJ_G0019849.1 mouse_genomes_project 13 47022414 47049291 - MGP_WSBEiJ_P0036059 Zfp169 protein_coding protein_coding MGP_WSBEiJ_T0036060.1 MGP_WSBEiJ_G0019849.1 mouse_genomes_project 13 47027024 47049316 - Zfp169 protein_coding retained_intron MGP_WSBEiJ_T0037144.1 MGP_WSBEiJ_G0020215.1 mouse_genomes_project 13 103660066 103674562 + MGP_WSBEiJ_P0037144 Cd180 protein_coding protein_coding MGP_WSBEiJ_T0037145.1 MGP_WSBEiJ_G0020215.1 mouse_genomes_project 13 103660073 103671870 + MGP_WSBEiJ_P0037145 Cd180 protein_coding protein_coding MGP_WSBEiJ_T0037146.1 MGP_WSBEiJ_G0020215.1 mouse_genomes_project 13 103660081 103672673 + MGP_WSBEiJ_P0037146 Cd180 protein_coding protein_coding MGP_WSBEiJ_T0035835.1 MGP_WSBEiJ_G0019769.1 mouse_genomes_project 13 31783719 31808922 - MGP_WSBEiJ_P0035835 Serpinb6c protein_coding protein_coding MGP_WSBEiJ_T0035836.1 MGP_WSBEiJ_G0019769.1 mouse_genomes_project 13 31783720 31809460 - MGP_WSBEiJ_P0035836 Serpinb6c protein_coding protein_coding MGP_WSBEiJ_T0036421.1 MGP_WSBEiJ_G0019961.1 mouse_genomes_project 13 58009869 58152152 + MGP_WSBEiJ_P0036421 Ntrk2 protein_coding protein_coding MGP_WSBEiJ_T0036422.1 MGP_WSBEiJ_G0019961.1 mouse_genomes_project 13 58011173 58358273 + MGP_WSBEiJ_P0036422 Ntrk2 protein_coding protein_coding MGP_WSBEiJ_T0035529.1 MGP_WSBEiJ_G0019603.1 mouse_genomes_project 13 16744636 16819615 - MGP_WSBEiJ_P0035529 Gpr141 protein_coding protein_coding MGP_WSBEiJ_T0009767.1 MGP_WSBEiJ_G0007924.1 mouse_genomes_project 13 20782210 20782319 + n-TStga1 miRNA miRNA MGP_WSBEiJ_T0035592.1 MGP_WSBEiJ_G0019640.1 mouse_genomes_project 13 18860056 18860644 + MGP_WSBEiJ_P0035592 Hist1h2bf protein_coding protein_coding MGP_WSBEiJ_T0036214.1 MGP_WSBEiJ_G0019900.1 mouse_genomes_project 13 53510711 53553646 + MGP_WSBEiJ_P0036214 Faf2 protein_coding protein_coding MGP_WSBEiJ_T0036215.1 MGP_WSBEiJ_G0019900.1 mouse_genomes_project 13 53510731 53530170 + MGP_WSBEiJ_P0036215 Faf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036216.1 MGP_WSBEiJ_G0019900.1 mouse_genomes_project 13 53510751 53551164 + MGP_WSBEiJ_P0036216 Faf2 protein_coding protein_coding MGP_WSBEiJ_T0036217.1 MGP_WSBEiJ_G0019900.1 mouse_genomes_project 13 53510762 53537058 + MGP_WSBEiJ_P0036217 Faf2 protein_coding protein_coding MGP_WSBEiJ_T0036218.1 MGP_WSBEiJ_G0019900.1 mouse_genomes_project 13 53510762 53536947 + MGP_WSBEiJ_P0036218 Faf2 protein_coding protein_coding MGP_WSBEiJ_T0036219.1 MGP_WSBEiJ_G0019900.1 mouse_genomes_project 13 53510765 53544989 + MGP_WSBEiJ_P0036219 Faf2 protein_coding protein_coding MGP_WSBEiJ_T0036220.1 MGP_WSBEiJ_G0019900.1 mouse_genomes_project 13 53530172 53544151 + MGP_WSBEiJ_P0036220 Faf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036221.1 MGP_WSBEiJ_G0019900.1 mouse_genomes_project 13 53540070 53544176 + Faf2 protein_coding retained_intron MGP_WSBEiJ_T0036711.1 MGP_WSBEiJ_G0020084.1 mouse_genomes_project 13 74262530 74279113 - MGP_WSBEiJ_P0036711 Pdcd6 protein_coding protein_coding MGP_WSBEiJ_T0036720.1 MGP_WSBEiJ_G0020086.1 mouse_genomes_project 13 74312380 74327703 + MGP_WSBEiJ_P0036720 Ccdc127 protein_coding protein_coding MGP_WSBEiJ_T0036721.1 MGP_WSBEiJ_G0020086.1 mouse_genomes_project 13 74312388 74324621 + MGP_WSBEiJ_P0036721 Ccdc127 protein_coding protein_coding MGP_WSBEiJ_T0036722.1 MGP_WSBEiJ_G0020086.1 mouse_genomes_project 13 74312415 74323005 + MGP_WSBEiJ_P0036722 Ccdc127 protein_coding protein_coding MGP_WSBEiJ_T0036723.1 MGP_WSBEiJ_G0020086.1 mouse_genomes_project 13 74312416 74322615 + MGP_WSBEiJ_P0036723 Ccdc127 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036724.1 MGP_WSBEiJ_G0020086.1 mouse_genomes_project 13 74312436 74318957 + MGP_WSBEiJ_P0036724 Ccdc127 protein_coding protein_coding MGP_WSBEiJ_T0003424.1 MGP_WSBEiJ_G0003128.1 mouse_genomes_project 13 99043589 99044472 + Gm9828 antisense antisense MGP_WSBEiJ_T0003425.1 MGP_WSBEiJ_G0003128.1 mouse_genomes_project 13 99044236 99050469 + Gm9828 antisense antisense MGP_WSBEiJ_T0003426.1 MGP_WSBEiJ_G0003128.1 mouse_genomes_project 13 99044283 99053393 + Gm9828 antisense antisense MGP_WSBEiJ_T0003427.1 MGP_WSBEiJ_G0003128.1 mouse_genomes_project 13 99047149 99049975 + Gm9828 antisense antisense MGP_WSBEiJ_T0096777.1 MGP_WSBEiJ_G0035458.1 mouse_genomes_project 13 91647276 91647703 + pseudogene pseudogene MGP_WSBEiJ_T0036612.1 MGP_WSBEiJ_G0020039.1 mouse_genomes_project 13 67090401 67100686 - MGP_WSBEiJ_P0036612 Zfp58 protein_coding protein_coding MGP_WSBEiJ_T0036613.1 MGP_WSBEiJ_G0020039.1 mouse_genomes_project 13 67090402 67100738 - MGP_WSBEiJ_P0036613 Zfp58 protein_coding protein_coding MGP_WSBEiJ_T0036615.1 MGP_WSBEiJ_G0020039.1 mouse_genomes_project 13 67091882 67100670 - MGP_WSBEiJ_P0036615 Zfp58 protein_coding protein_coding MGP_WSBEiJ_T0036616.1 MGP_WSBEiJ_G0020039.1 mouse_genomes_project 13 67092097 67100627 - MGP_WSBEiJ_P0036616 Zfp58 protein_coding protein_coding MGP_WSBEiJ_T0006497.1 MGP_WSBEiJ_G0005386.1 mouse_genomes_project 13 69778368 69802747 - 1700084F23Rik lincRNA lincRNA MGP_WSBEiJ_T0006498.1 MGP_WSBEiJ_G0005386.1 mouse_genomes_project 13 69787116 69802231 - 1700084F23Rik lincRNA lincRNA MGP_WSBEiJ_T0036992.1 MGP_WSBEiJ_G0020159.1 mouse_genomes_project 13 95926762 95951433 - MGP_WSBEiJ_P0036992 Aggf1 protein_coding protein_coding MGP_WSBEiJ_T0036993.1 MGP_WSBEiJ_G0020159.1 mouse_genomes_project 13 95929581 95951415 - Aggf1 protein_coding processed_transcript MGP_WSBEiJ_T0012648.1 MGP_WSBEiJ_G0010778.1 mouse_genomes_project 13 67375989 67376819 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000853.1 MGP_WSBEiJ_G0000791.1 mouse_genomes_project 13 64477507 64477648 - TEC TEC MGP_WSBEiJ_T0035330.1 MGP_WSBEiJ_G0019537.1 mouse_genomes_project 13 294152 295578 - MGP_WSBEiJ_P0035330 Calml3 protein_coding protein_coding MGP_WSBEiJ_T0035787.1 MGP_WSBEiJ_G0019743.1 mouse_genomes_project 13 27550582 27632352 - MGP_WSBEiJ_P0035787 E2f3 protein_coding protein_coding MGP_WSBEiJ_T0035788.1 MGP_WSBEiJ_G0019743.1 mouse_genomes_project 13 27562798 27630906 - MGP_WSBEiJ_P0035788 E2f3 protein_coding protein_coding MGP_WSBEiJ_T0036493.1 MGP_WSBEiJ_G0019991.1 mouse_genomes_project 13 62363581 62387103 - MGP_WSBEiJ_P0036493 Fbp1 protein_coding protein_coding MGP_WSBEiJ_T0036494.1 MGP_WSBEiJ_G0019991.1 mouse_genomes_project 13 62363594 62371584 - MGP_WSBEiJ_P0036494 Fbp1 protein_coding protein_coding MGP_WSBEiJ_T0036495.1 MGP_WSBEiJ_G0019991.1 mouse_genomes_project 13 62371544 62386948 - MGP_WSBEiJ_P0036495 Fbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012616.1 MGP_WSBEiJ_G0010746.1 mouse_genomes_project 13 23589741 23590258 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037078.1 MGP_WSBEiJ_G0020198.1 mouse_genomes_project 13 100805200 100892889 - MGP_WSBEiJ_P0037078 Bdp1 protein_coding protein_coding MGP_WSBEiJ_T0037079.1 MGP_WSBEiJ_G0020198.1 mouse_genomes_project 13 100805202 100844982 - MGP_WSBEiJ_P0037079 Bdp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037080.1 MGP_WSBEiJ_G0020198.1 mouse_genomes_project 13 100810509 100892657 - MGP_WSBEiJ_P0037080 Bdp1 protein_coding protein_coding MGP_WSBEiJ_T0037081.1 MGP_WSBEiJ_G0020198.1 mouse_genomes_project 13 100830867 100834838 - Bdp1 protein_coding retained_intron MGP_WSBEiJ_T0037082.1 MGP_WSBEiJ_G0020198.1 mouse_genomes_project 13 100850172 100855157 - Bdp1 protein_coding retained_intron MGP_WSBEiJ_T0037083.1 MGP_WSBEiJ_G0020198.1 mouse_genomes_project 13 100867432 100887395 - MGP_WSBEiJ_P0037083 Bdp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037084.1 MGP_WSBEiJ_G0020198.1 mouse_genomes_project 13 100886356 100892696 - MGP_WSBEiJ_P0037084 Bdp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035877.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32917782 32933668 - MGP_WSBEiJ_P0035877 Eci2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035878.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32917788 32934637 - MGP_WSBEiJ_P0035878 Eci2 protein_coding protein_coding MGP_WSBEiJ_T0035879.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32917789 32934620 - MGP_WSBEiJ_P0035879 Eci2 protein_coding protein_coding MGP_WSBEiJ_T0035880.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32917790 32934637 - MGP_WSBEiJ_P0035880 Eci2 protein_coding protein_coding MGP_WSBEiJ_T0035881.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32917797 32934625 - MGP_WSBEiJ_P0035881 Eci2 protein_coding protein_coding MGP_WSBEiJ_T0035882.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32918742 32929086 - Eci2 protein_coding processed_transcript MGP_WSBEiJ_T0035883.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32920292 32929829 - Eci2 protein_coding processed_transcript MGP_WSBEiJ_T0035884.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32926159 32928620 - Eci2 protein_coding retained_intron MGP_WSBEiJ_T0035885.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32926411 32934616 - MGP_WSBEiJ_P0035885 Eci2 protein_coding protein_coding MGP_WSBEiJ_T0035886.1 MGP_WSBEiJ_G0019783.1 mouse_genomes_project 13 32927788 32934615 - MGP_WSBEiJ_P0035886 Eci2 protein_coding protein_coding MGP_WSBEiJ_T0003364.1 MGP_WSBEiJ_G0003091.1 mouse_genomes_project 13 19724830 19744828 + antisense antisense MGP_WSBEiJ_T0016762.1 MGP_WSBEiJ_G0014672.1 mouse_genomes_project 13 39105838 39151907 - A730081D07Rik processed_transcript processed_transcript MGP_WSBEiJ_T0036900.1 MGP_WSBEiJ_G0020131.1 mouse_genomes_project 13 92330359 92572202 - MGP_WSBEiJ_P0036900 Rasgrf2 protein_coding protein_coding MGP_WSBEiJ_T0036901.1 MGP_WSBEiJ_G0020131.1 mouse_genomes_project 13 92334435 92572202 - MGP_WSBEiJ_P0036901 Rasgrf2 protein_coding protein_coding MGP_WSBEiJ_T0036902.1 MGP_WSBEiJ_G0020131.1 mouse_genomes_project 13 92411987 92436632 - MGP_WSBEiJ_P0036902 Rasgrf2 protein_coding protein_coding MGP_WSBEiJ_T0036903.1 MGP_WSBEiJ_G0020131.1 mouse_genomes_project 13 92466318 92468727 - MGP_WSBEiJ_P0036903 Rasgrf2 protein_coding protein_coding MGP_WSBEiJ_T0036904.1 MGP_WSBEiJ_G0020131.1 mouse_genomes_project 13 92466318 92572364 - MGP_WSBEiJ_P0036904 Rasgrf2 protein_coding protein_coding MGP_WSBEiJ_T0037356.1 MGP_WSBEiJ_G0020285.1 mouse_genomes_project 13 121023672 121120472 - MGP_WSBEiJ_P0037356 Nnt protein_coding protein_coding MGP_WSBEiJ_T0037357.1 MGP_WSBEiJ_G0020285.1 mouse_genomes_project 13 121023672 121120472 - MGP_WSBEiJ_P0037357 Nnt protein_coding protein_coding MGP_WSBEiJ_T0037358.1 MGP_WSBEiJ_G0020285.1 mouse_genomes_project 13 121023746 121099585 - MGP_WSBEiJ_P0037358 Nnt protein_coding unknown_likely_coding MGP_WSBEiJ_T0037359.1 MGP_WSBEiJ_G0020285.1 mouse_genomes_project 13 121042694 121120472 - MGP_WSBEiJ_P0037359 Nnt protein_coding protein_coding MGP_WSBEiJ_T0037360.1 MGP_WSBEiJ_G0020285.1 mouse_genomes_project 13 121097126 121120472 - Nnt protein_coding processed_transcript MGP_WSBEiJ_T0037361.1 MGP_WSBEiJ_G0020285.1 mouse_genomes_project 13 121102625 121120472 - Nnt protein_coding processed_transcript MGP_WSBEiJ_T0096775.1 MGP_WSBEiJ_G0035456.1 mouse_genomes_project 13 45438657 45439180 + pseudogene pseudogene MGP_WSBEiJ_T0012659.1 MGP_WSBEiJ_G0010789.1 mouse_genomes_project 13 76952517 76953186 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037299.1 MGP_WSBEiJ_G0020253.1 mouse_genomes_project 13 113885582 113947155 - MGP_WSBEiJ_P0037299 Il31ra protein_coding protein_coding MGP_WSBEiJ_T0099064.1 MGP_WSBEiJ_G0037727.1 mouse_genomes_project 13 79173215 79173359 + Gm25383 snoRNA snoRNA MGP_WSBEiJ_T0016752.1 MGP_WSBEiJ_G0014669.1 mouse_genomes_project 13 26040957 26097443 - processed_transcript processed_transcript MGP_WSBEiJ_T0016753.1 MGP_WSBEiJ_G0014669.1 mouse_genomes_project 13 26041701 26481053 - processed_transcript processed_transcript MGP_WSBEiJ_T0016754.1 MGP_WSBEiJ_G0014669.1 mouse_genomes_project 13 26041701 26056092 - processed_transcript processed_transcript MGP_WSBEiJ_T0016755.1 MGP_WSBEiJ_G0014669.1 mouse_genomes_project 13 26041864 26092856 - processed_transcript processed_transcript MGP_WSBEiJ_T0016756.1 MGP_WSBEiJ_G0014669.1 mouse_genomes_project 13 26081246 26093015 - processed_transcript processed_transcript MGP_WSBEiJ_T0016757.1 MGP_WSBEiJ_G0014669.1 mouse_genomes_project 13 26140837 26478888 - processed_transcript processed_transcript MGP_WSBEiJ_T0016758.1 MGP_WSBEiJ_G0014669.1 mouse_genomes_project 13 26250262 26480777 - processed_transcript processed_transcript MGP_WSBEiJ_T0036952.1 MGP_WSBEiJ_G0020147.1 mouse_genomes_project 13 94152384 94173991 - MGP_WSBEiJ_P0036952 Bhmt2 protein_coding protein_coding MGP_WSBEiJ_T0037375.1 MGP_WSBEiJ_G0020292.1 mouse_genomes_project 13 121383430 121415862 + MGP_WSBEiJ_P0037375 Ccl28 protein_coding protein_coding MGP_WSBEiJ_T0097799.1 MGP_WSBEiJ_G0036462.1 mouse_genomes_project 13 20954807 20954911 + Gm22452 snRNA snRNA MGP_WSBEiJ_T0000870.1 MGP_WSBEiJ_G0000808.1 mouse_genomes_project 13 102686313 102686713 - TEC TEC MGP_WSBEiJ_T0036478.1 MGP_WSBEiJ_G0019978.1 mouse_genomes_project 13 60193498 60195532 - MGP_WSBEiJ_P0036478 Ctla2b protein_coding protein_coding MGP_WSBEiJ_T0036479.1 MGP_WSBEiJ_G0019978.1 mouse_genomes_project 13 60193498 60195532 - MGP_WSBEiJ_P0036479 Ctla2b protein_coding protein_coding MGP_WSBEiJ_T0036665.1 MGP_WSBEiJ_G0020063.1 mouse_genomes_project 13 73167387 73176489 + MGP_WSBEiJ_P0036665 Irx4 protein_coding protein_coding MGP_WSBEiJ_T0036666.1 MGP_WSBEiJ_G0020063.1 mouse_genomes_project 13 73167405 73176489 + MGP_WSBEiJ_P0036666 Irx4 protein_coding protein_coding MGP_WSBEiJ_T0012661.1 MGP_WSBEiJ_G0010791.1 mouse_genomes_project 13 80136628 80137783 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035933.1 MGP_WSBEiJ_G0019805.1 mouse_genomes_project 13 38855733 38871398 - MGP_WSBEiJ_P0035933 Tfap2a protein_coding protein_coding MGP_WSBEiJ_T0035934.1 MGP_WSBEiJ_G0019805.1 mouse_genomes_project 13 38856731 38874748 - MGP_WSBEiJ_P0035934 Tfap2a protein_coding protein_coding MGP_WSBEiJ_T0036763.1 MGP_WSBEiJ_G0020104.1 mouse_genomes_project 13 78004755 78006148 + MGP_WSBEiJ_P0036763 Pou5f2 protein_coding protein_coding MGP_WSBEiJ_T0036696.1 MGP_WSBEiJ_G0020077.1 mouse_genomes_project 13 73913004 73944292 + MGP_WSBEiJ_P0036696 Zdhhc11 protein_coding protein_coding MGP_WSBEiJ_T0036569.1 MGP_WSBEiJ_G0020016.1 mouse_genomes_project 13 66454592 66460708 + MGP_WSBEiJ_P0036569 protein_coding protein_coding MGP_WSBEiJ_T0037324.1 MGP_WSBEiJ_G0020268.1 mouse_genomes_project 13 115004177 115030564 - MGP_WSBEiJ_P0037324 Snx18 protein_coding protein_coding MGP_WSBEiJ_T0012619.1 MGP_WSBEiJ_G0010749.1 mouse_genomes_project 13 24753423 24753764 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035960.1 MGP_WSBEiJ_G0019818.1 mouse_genomes_project 13 39942800 40034321 - MGP_WSBEiJ_P0035960 Adtrp protein_coding protein_coding MGP_WSBEiJ_T0035961.1 MGP_WSBEiJ_G0019818.1 mouse_genomes_project 13 39943785 40034517 - MGP_WSBEiJ_P0035961 Adtrp protein_coding protein_coding MGP_WSBEiJ_T0035962.1 MGP_WSBEiJ_G0019818.1 mouse_genomes_project 13 39944242 40034449 - MGP_WSBEiJ_P0035962 Adtrp protein_coding protein_coding MGP_WSBEiJ_T0035963.1 MGP_WSBEiJ_G0019818.1 mouse_genomes_project 13 39957164 40014063 - MGP_WSBEiJ_P0035963 Adtrp protein_coding protein_coding MGP_WSBEiJ_T0100530.1 MGP_WSBEiJ_G0038988.1 mouse_genomes_project 13 19541769 19542843 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035406.1 MGP_WSBEiJ_G0019563.1 mouse_genomes_project 13 5511453 5538269 - MGP_WSBEiJ_P0035406 Gtpbp4 protein_coding protein_coding MGP_WSBEiJ_T0006488.1 MGP_WSBEiJ_G0005379.1 mouse_genomes_project 13 57311856 57312770 - 1700066J03Rik lincRNA lincRNA MGP_WSBEiJ_T0035617.1 MGP_WSBEiJ_G0019656.1 mouse_genomes_project 13 19541651 19542840 + MGP_WSBEiJ_P0035617 Vmn1r200 protein_coding protein_coding MGP_WSBEiJ_T0035804.1 MGP_WSBEiJ_G0019751.1 mouse_genomes_project 13 28680470 28682243 + MGP_WSBEiJ_P0035804 Gm5447 protein_coding protein_coding MGP_WSBEiJ_T0100538.1 MGP_WSBEiJ_G0038996.1 mouse_genomes_project 13 20051083 20051375 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012601.1 MGP_WSBEiJ_G0010731.1 mouse_genomes_project 13 19809551 19810865 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036361.1 MGP_WSBEiJ_G0019939.1 mouse_genomes_project 13 55176628 55181791 - MGP_WSBEiJ_P0036361 Tifab protein_coding protein_coding MGP_WSBEiJ_T0012628.1 MGP_WSBEiJ_G0010758.1 mouse_genomes_project 13 28909090 28909661 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036965.1 MGP_WSBEiJ_G0020152.1 mouse_genomes_project 13 94883322 94886295 - MGP_WSBEiJ_P0036965 Gm9776 protein_coding protein_coding MGP_WSBEiJ_T0036238.1 MGP_WSBEiJ_G0019904.1 mouse_genomes_project 13 53654418 53662156 - MGP_WSBEiJ_P0036238 Sncb protein_coding protein_coding MGP_WSBEiJ_T0036239.1 MGP_WSBEiJ_G0019904.1 mouse_genomes_project 13 53654940 53661658 - MGP_WSBEiJ_P0036239 Sncb protein_coding protein_coding MGP_WSBEiJ_T0036240.1 MGP_WSBEiJ_G0019904.1 mouse_genomes_project 13 53654987 53658629 - Sncb protein_coding retained_intron MGP_WSBEiJ_T0036241.1 MGP_WSBEiJ_G0019904.1 mouse_genomes_project 13 53660620 53662053 - Sncb protein_coding retained_intron MGP_WSBEiJ_T0100006.1 MGP_WSBEiJ_G0038648.1 mouse_genomes_project 13 21926455 21935989 - transcribed_processed_pseudogene retained_intron MGP_WSBEiJ_T0100007.1 MGP_WSBEiJ_G0038648.1 mouse_genomes_project 13 21927197 21927901 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100008.1 MGP_WSBEiJ_G0038648.1 mouse_genomes_project 13 21927641 21935818 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100009.1 MGP_WSBEiJ_G0038648.1 mouse_genomes_project 13 21927738 21935759 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0006500.1 MGP_WSBEiJ_G0005388.1 mouse_genomes_project 13 79308981 79322486 + Gm29318 lincRNA lincRNA MGP_WSBEiJ_T0036151.1 MGP_WSBEiJ_G0019880.1 mouse_genomes_project 13 50585760 50587553 + MGP_WSBEiJ_P0036151 Gadd45g protein_coding protein_coding MGP_WSBEiJ_T0036152.1 MGP_WSBEiJ_G0019880.1 mouse_genomes_project 13 50585826 50587309 + Gadd45g protein_coding retained_intron MGP_WSBEiJ_T0036921.1 MGP_WSBEiJ_G0020135.1 mouse_genomes_project 13 92877810 92896708 + MGP_WSBEiJ_P0036921 Ankrd34b protein_coding protein_coding MGP_WSBEiJ_T0036922.1 MGP_WSBEiJ_G0020135.1 mouse_genomes_project 13 92878255 92890259 + MGP_WSBEiJ_P0036922 Ankrd34b protein_coding protein_coding MGP_WSBEiJ_T0036923.1 MGP_WSBEiJ_G0020135.1 mouse_genomes_project 13 92878572 92895978 + MGP_WSBEiJ_P0036923 Ankrd34b protein_coding protein_coding MGP_WSBEiJ_T0100542.1 MGP_WSBEiJ_G0039000.1 mouse_genomes_project 13 20086191 20087093 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0096947.1 MGP_WSBEiJ_G0035628.1 mouse_genomes_project 13 20975670 20975778 - Gm24991 rRNA rRNA MGP_WSBEiJ_T0009810.1 MGP_WSBEiJ_G0007967.1 mouse_genomes_project 13 114430305 114430385 + Mir449b miRNA miRNA MGP_WSBEiJ_T0036949.1 MGP_WSBEiJ_G0020146.1 mouse_genomes_project 13 94109003 94131508 - MGP_WSBEiJ_P0036949 Gm5096 protein_coding protein_coding MGP_WSBEiJ_T0036950.1 MGP_WSBEiJ_G0020146.1 mouse_genomes_project 13 94110572 94131043 - MGP_WSBEiJ_P0036950 Gm5096 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036951.1 MGP_WSBEiJ_G0020146.1 mouse_genomes_project 13 94114963 94131113 - Gm5096 protein_coding retained_intron MGP_WSBEiJ_T0037352.1 MGP_WSBEiJ_G0020283.1 mouse_genomes_project 13 120076305 120077807 + MGP_WSBEiJ_P0037352 B430218F22Rik protein_coding protein_coding MGP_WSBEiJ_T0037320.1 MGP_WSBEiJ_G0020266.1 mouse_genomes_project 13 114614562 114622982 + MGP_WSBEiJ_P0037320 Esm1 protein_coding protein_coding MGP_WSBEiJ_T0006463.1 MGP_WSBEiJ_G0005364.1 mouse_genomes_project 13 44345817 44347073 + 5033430I15Rik lincRNA lincRNA MGP_WSBEiJ_T0006464.1 MGP_WSBEiJ_G0005364.1 mouse_genomes_project 13 44345915 44346742 + 5033430I15Rik lincRNA lincRNA MGP_WSBEiJ_T0036181.1 MGP_WSBEiJ_G0019890.1 mouse_genomes_project 13 52929209 52967673 + MGP_WSBEiJ_P0036181 Sfxn1 protein_coding protein_coding MGP_WSBEiJ_T0009775.1 MGP_WSBEiJ_G0007932.1 mouse_genomes_project 13 47074303 47074406 - Mirlet7d miRNA miRNA MGP_WSBEiJ_T0016750.1 MGP_WSBEiJ_G0014667.1 mouse_genomes_project 13 21052907 21054325 - 4930558J22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0006443.1 MGP_WSBEiJ_G0005349.1 mouse_genomes_project 13 29288912 29305932 - 1700018A04Rik lincRNA lincRNA MGP_WSBEiJ_T0006444.1 MGP_WSBEiJ_G0005349.1 mouse_genomes_project 13 29290817 29305940 - 1700018A04Rik lincRNA lincRNA MGP_WSBEiJ_T0006445.1 MGP_WSBEiJ_G0005349.1 mouse_genomes_project 13 29301714 29305940 - 1700018A04Rik lincRNA lincRNA MGP_WSBEiJ_T0097801.1 MGP_WSBEiJ_G0036464.1 mouse_genomes_project 13 25360523 25360623 + Gm22476 snRNA snRNA MGP_WSBEiJ_T0037174.1 MGP_WSBEiJ_G0020220.1 mouse_genomes_project 13 105110426 105136536 + MGP_WSBEiJ_P0037174 Sgtb protein_coding protein_coding MGP_WSBEiJ_T0037175.1 MGP_WSBEiJ_G0020220.1 mouse_genomes_project 13 105110443 105148561 + MGP_WSBEiJ_P0037175 Sgtb protein_coding protein_coding MGP_WSBEiJ_T0009765.1 MGP_WSBEiJ_G0007922.1 mouse_genomes_project 13 19014531 19014663 - Mir1983 miRNA miRNA MGP_WSBEiJ_T0035876.1 MGP_WSBEiJ_G0019782.1 mouse_genomes_project 13 32883933 32903816 - MGP_WSBEiJ_P0035876 Eci3 protein_coding protein_coding MGP_WSBEiJ_T0035622.1 MGP_WSBEiJ_G0019661.1 mouse_genomes_project 13 19724501 19725494 - MGP_WSBEiJ_P0035622 Vmn1r208 protein_coding protein_coding MGP_WSBEiJ_T0036292.1 MGP_WSBEiJ_G0019913.1 mouse_genomes_project 13 54147698 54259193 + MGP_WSBEiJ_P0036292 Nsd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0099045.1 MGP_WSBEiJ_G0037708.1 mouse_genomes_project 13 34635815 34635947 + Gm26395 snoRNA snoRNA MGP_WSBEiJ_T0035855.1 MGP_WSBEiJ_G0019772.1 mouse_genomes_project 13 31917769 31949681 + MGP_WSBEiJ_P0035855 Ripk1 protein_coding protein_coding MGP_WSBEiJ_T0035856.1 MGP_WSBEiJ_G0019772.1 mouse_genomes_project 13 31917806 31930109 + Ripk1 protein_coding retained_intron MGP_WSBEiJ_T0035857.1 MGP_WSBEiJ_G0019772.1 mouse_genomes_project 13 31918280 31951174 + MGP_WSBEiJ_P0035857 Ripk1 protein_coding protein_coding MGP_WSBEiJ_T0035858.1 MGP_WSBEiJ_G0019772.1 mouse_genomes_project 13 31925095 31948822 + MGP_WSBEiJ_P0035858 Ripk1 protein_coding protein_coding MGP_WSBEiJ_T0006494.1 MGP_WSBEiJ_G0005383.1 mouse_genomes_project 13 67236499 67239116 - lincRNA lincRNA MGP_WSBEiJ_T0035893.1 MGP_WSBEiJ_G0019786.1 mouse_genomes_project 13 33907565 33920213 + Ppp1r3g protein_coding processed_transcript MGP_WSBEiJ_T0035894.1 MGP_WSBEiJ_G0019786.1 mouse_genomes_project 13 33919741 33922284 + MGP_WSBEiJ_P0035894 Ppp1r3g protein_coding protein_coding MGP_WSBEiJ_T0035544.1 MGP_WSBEiJ_G0019610.1 mouse_genomes_project 13 18364974 18372666 + MGP_WSBEiJ_P0035544 Gpx6 protein_coding protein_coding MGP_WSBEiJ_T0035545.1 MGP_WSBEiJ_G0019610.1 mouse_genomes_project 13 18370305 18372670 + Gpx6 protein_coding processed_transcript MGP_WSBEiJ_T0036209.1 MGP_WSBEiJ_G0019898.1 mouse_genomes_project 13 53476916 53477868 + MGP_WSBEiJ_P0036209 Higd2a protein_coding protein_coding MGP_WSBEiJ_T0037068.1 MGP_WSBEiJ_G0020190.1 mouse_genomes_project 13 99603812 99688813 - MGP_WSBEiJ_P0037068 Tnpo1 protein_coding protein_coding MGP_WSBEiJ_T0037069.1 MGP_WSBEiJ_G0020190.1 mouse_genomes_project 13 99611320 99653113 - MGP_WSBEiJ_P0037069 Tnpo1 protein_coding protein_coding MGP_WSBEiJ_T0037070.1 MGP_WSBEiJ_G0020190.1 mouse_genomes_project 13 99637693 99653129 - MGP_WSBEiJ_P0037070 Tnpo1 protein_coding protein_coding MGP_WSBEiJ_T0035453.1 MGP_WSBEiJ_G0019573.1 mouse_genomes_project 13 9124460 9179916 - MGP_WSBEiJ_P0035453 Edaradd protein_coding protein_coding MGP_WSBEiJ_T0100548.1 MGP_WSBEiJ_G0039006.1 mouse_genomes_project 13 21042890 21043224 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036202.1 MGP_WSBEiJ_G0019896.1 mouse_genomes_project 13 53461716 53467826 + MGP_WSBEiJ_P0036202 Arl10 protein_coding protein_coding MGP_WSBEiJ_T0036203.1 MGP_WSBEiJ_G0019896.1 mouse_genomes_project 13 53461748 53465714 + MGP_WSBEiJ_P0036203 Arl10 protein_coding protein_coding MGP_WSBEiJ_T0036204.1 MGP_WSBEiJ_G0019896.1 mouse_genomes_project 13 53465078 53465607 + Arl10 protein_coding processed_transcript MGP_WSBEiJ_T0036205.1 MGP_WSBEiJ_G0019896.1 mouse_genomes_project 13 53465509 53466235 + MGP_WSBEiJ_P0036205 Arl10 protein_coding protein_coding MGP_WSBEiJ_T0100533.1 MGP_WSBEiJ_G0038991.1 mouse_genomes_project 13 19632269 19632850 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035775.1 MGP_WSBEiJ_G0019741.1 mouse_genomes_project 13 26550452 26555245 - MGP_WSBEiJ_P0035775 Sox4 protein_coding protein_coding MGP_WSBEiJ_T0009764.1 MGP_WSBEiJ_G0007921.1 mouse_genomes_project 13 18785967 18859563 + miRNA miRNA MGP_WSBEiJ_T0035956.1 MGP_WSBEiJ_G0019815.1 mouse_genomes_project 13 39469925 39654131 - MGP_WSBEiJ_P0035956 Nedd9 protein_coding protein_coding MGP_WSBEiJ_T0035957.1 MGP_WSBEiJ_G0019815.1 mouse_genomes_project 13 39469925 39520397 - MGP_WSBEiJ_P0035957 Nedd9 protein_coding protein_coding MGP_WSBEiJ_T0003366.1 MGP_WSBEiJ_G0003093.1 mouse_genomes_project 13 21095065 21104873 - Gm11337 antisense antisense MGP_WSBEiJ_T0006449.1 MGP_WSBEiJ_G0005353.1 mouse_genomes_project 13 35399055 35401502 - Gm4035 lincRNA lincRNA MGP_WSBEiJ_T0006450.1 MGP_WSBEiJ_G0005353.1 mouse_genomes_project 13 35399167 35413068 - Gm4035 lincRNA lincRNA MGP_WSBEiJ_T0037114.1 MGP_WSBEiJ_G0020205.1 mouse_genomes_project 13 101499338 101535942 - MGP_WSBEiJ_P0037114 Rad17 protein_coding protein_coding MGP_WSBEiJ_T0037115.1 MGP_WSBEiJ_G0020205.1 mouse_genomes_project 13 101499338 101535942 - MGP_WSBEiJ_P0037115 Rad17 protein_coding protein_coding MGP_WSBEiJ_T0035948.1 MGP_WSBEiJ_G0019810.1 mouse_genomes_project 13 39249091 39257637 - MGP_WSBEiJ_P0035948 Gcm2 protein_coding protein_coding MGP_WSBEiJ_T0003391.1 MGP_WSBEiJ_G0003111.1 mouse_genomes_project 13 62828385 62835333 + Gm16133 antisense antisense MGP_WSBEiJ_T0003392.1 MGP_WSBEiJ_G0003111.1 mouse_genomes_project 13 62828458 62835330 + Gm16133 antisense antisense MGP_WSBEiJ_T0035660.1 MGP_WSBEiJ_G0019689.1 mouse_genomes_project 13 21043514 21043967 + MGP_WSBEiJ_P0035660 Hist1h2bb protein_coding protein_coding MGP_WSBEiJ_T0035459.1 MGP_WSBEiJ_G0019579.1 mouse_genomes_project 13 10424793 10612602 + MGP_WSBEiJ_P0035459 Lyst protein_coding protein_coding MGP_WSBEiJ_T0035625.1 MGP_WSBEiJ_G0019664.1 mouse_genomes_project 13 20254509 20255613 + MGP_WSBEiJ_P0035625 Vmn1r214 protein_coding protein_coding MGP_WSBEiJ_T0036789.1 MGP_WSBEiJ_G0020108.1 mouse_genomes_project 13 81756481 81770043 + MGP_WSBEiJ_P0036789 Lysmd3 protein_coding protein_coding MGP_WSBEiJ_T0035661.1 MGP_WSBEiJ_G0019690.1 mouse_genomes_project 13 21047843 21048303 + MGP_WSBEiJ_P0035661 Hist1h2ab protein_coding protein_coding MGP_WSBEiJ_T0097814.1 MGP_WSBEiJ_G0036477.1 mouse_genomes_project 13 55357337 55357441 - Gm24716 snRNA snRNA MGP_WSBEiJ_T0011147.1 MGP_WSBEiJ_G0009304.1 mouse_genomes_project 13 6202298 6202546 - Gm23496 misc_RNA misc_RNA MGP_WSBEiJ_T0000858.1 MGP_WSBEiJ_G0000796.1 mouse_genomes_project 13 83905418 83909245 - TEC TEC MGP_WSBEiJ_T0099059.1 MGP_WSBEiJ_G0037722.1 mouse_genomes_project 13 75769789 75769919 + Gm23127 snoRNA snoRNA MGP_WSBEiJ_T0006418.1 MGP_WSBEiJ_G0005331.1 mouse_genomes_project 13 20504323 20508140 + 4933404K08Rik lincRNA lincRNA MGP_WSBEiJ_T0035954.1 MGP_WSBEiJ_G0019813.1 mouse_genomes_project 13 39407171 39434470 + MGP_WSBEiJ_P0035954 Smim13 protein_coding protein_coding MGP_WSBEiJ_T0036138.1 MGP_WSBEiJ_G0019878.1 mouse_genomes_project 13 50380223 50403630 - MGP_WSBEiJ_P0036138 Gm15440 protein_coding protein_coding MGP_WSBEiJ_T0036660.1 MGP_WSBEiJ_G0020062.1 mouse_genomes_project 13 72496914 72504018 + MGP_WSBEiJ_P0036660 Irx2 protein_coding protein_coding MGP_WSBEiJ_T0036661.1 MGP_WSBEiJ_G0020062.1 mouse_genomes_project 13 72497065 72500537 + Irx2 protein_coding processed_transcript MGP_WSBEiJ_T0036662.1 MGP_WSBEiJ_G0020062.1 mouse_genomes_project 13 72499636 72500692 + MGP_WSBEiJ_P0036662 Irx2 protein_coding protein_coding MGP_WSBEiJ_T0036663.1 MGP_WSBEiJ_G0020062.1 mouse_genomes_project 13 72501896 72503430 + Irx2 protein_coding retained_intron MGP_WSBEiJ_T0036664.1 MGP_WSBEiJ_G0020062.1 mouse_genomes_project 13 72502409 72503587 + MGP_WSBEiJ_P0036664 Irx2 protein_coding protein_coding MGP_WSBEiJ_T0035594.1 MGP_WSBEiJ_G0019642.1 mouse_genomes_project 13 19065546 19080833 + MGP_WSBEiJ_P0035594 Zfp184 protein_coding protein_coding MGP_WSBEiJ_T0035595.1 MGP_WSBEiJ_G0019642.1 mouse_genomes_project 13 19065564 19081125 + MGP_WSBEiJ_P0035595 Zfp184 protein_coding protein_coding MGP_WSBEiJ_T0035596.1 MGP_WSBEiJ_G0019642.1 mouse_genomes_project 13 19065564 19080951 + MGP_WSBEiJ_P0035596 Zfp184 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035597.1 MGP_WSBEiJ_G0019642.1 mouse_genomes_project 13 19065589 19070777 + MGP_WSBEiJ_P0035597 Zfp184 protein_coding protein_coding MGP_WSBEiJ_T0035598.1 MGP_WSBEiJ_G0019642.1 mouse_genomes_project 13 19066245 19080687 + MGP_WSBEiJ_P0035598 Zfp184 protein_coding protein_coding MGP_WSBEiJ_T0035599.1 MGP_WSBEiJ_G0019642.1 mouse_genomes_project 13 19069841 19079059 + Zfp184 protein_coding retained_intron MGP_WSBEiJ_T0035403.1 MGP_WSBEiJ_G0019561.1 mouse_genomes_project 13 5489710 5499025 + MGP_WSBEiJ_P0035403 protein_coding protein_coding MGP_WSBEiJ_T0036583.1 MGP_WSBEiJ_G0020020.1 mouse_genomes_project 13 66589183 66610174 - MGP_WSBEiJ_P0036583 Zfp712 protein_coding protein_coding MGP_WSBEiJ_T0012671.1 MGP_WSBEiJ_G0010801.1 mouse_genomes_project 13 99735254 99735587 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006417.1 MGP_WSBEiJ_G0005330.1 mouse_genomes_project 13 20502248 20541911 - 4930557F10Rik lincRNA lincRNA MGP_WSBEiJ_T0100564.1 MGP_WSBEiJ_G0039022.1 mouse_genomes_project 13 31724693 31725617 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035873.1 MGP_WSBEiJ_G0019780.1 mouse_genomes_project 13 32843196 32853239 - MGP_WSBEiJ_P0035873 Fam217a protein_coding protein_coding MGP_WSBEiJ_T0012632.1 MGP_WSBEiJ_G0010762.1 mouse_genomes_project 13 32875896 32876861 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009779.1 MGP_WSBEiJ_G0007936.1 mouse_genomes_project 13 50494758 50494866 + Gm23566 miRNA miRNA MGP_WSBEiJ_T0036082.1 MGP_WSBEiJ_G0019857.1 mouse_genomes_project 13 47781014 47794101 - MGP_WSBEiJ_P0036082 Card19 protein_coding protein_coding MGP_WSBEiJ_T0012605.1 MGP_WSBEiJ_G0010735.1 mouse_genomes_project 13 20607143 20607299 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036139.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50403834 50523130 - MGP_WSBEiJ_P0036139 Sema4d protein_coding protein_coding MGP_WSBEiJ_T0036140.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50403834 50523204 - MGP_WSBEiJ_P0036140 Sema4d protein_coding protein_coding MGP_WSBEiJ_T0036141.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50403838 50462757 - MGP_WSBEiJ_P0036141 Sema4d protein_coding protein_coding MGP_WSBEiJ_T0036142.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50431455 50476851 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036143.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50431455 50476747 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036144.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50433044 50480095 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036145.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50433091 50484212 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036146.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50433111 50486249 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036147.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50433134 50486115 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036148.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50433161 50476658 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036149.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50433210 50506502 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036150.1 MGP_WSBEiJ_G0019879.1 mouse_genomes_project 13 50433243 50523121 - Sema4d protein_coding processed_transcript MGP_WSBEiJ_T0036934.1 MGP_WSBEiJ_G0020142.1 mouse_genomes_project 13 93513489 93619694 - MGP_WSBEiJ_P0036934 Cmya5 protein_coding protein_coding MGP_WSBEiJ_T0035636.1 MGP_WSBEiJ_G0019672.1 mouse_genomes_project 13 20715775 20724636 - MGP_WSBEiJ_P0035636 Btn1a1 protein_coding protein_coding MGP_WSBEiJ_T0035637.1 MGP_WSBEiJ_G0019672.1 mouse_genomes_project 13 20722508 20724662 - MGP_WSBEiJ_P0035637 Btn1a1 protein_coding protein_coding MGP_WSBEiJ_T0037109.1 MGP_WSBEiJ_G0020203.1 mouse_genomes_project 13 101376471 101434899 - MGP_WSBEiJ_P0037109 Ocln protein_coding protein_coding MGP_WSBEiJ_T0037110.1 MGP_WSBEiJ_G0020203.1 mouse_genomes_project 13 101394083 101434866 - MGP_WSBEiJ_P0037110 Ocln protein_coding protein_coding MGP_WSBEiJ_T0035943.1 MGP_WSBEiJ_G0019808.1 mouse_genomes_project 13 39167710 39174165 + MGP_WSBEiJ_P0035943 Tmem14c protein_coding protein_coding MGP_WSBEiJ_T0035497.1 MGP_WSBEiJ_G0019592.1 mouse_genomes_project 13 13755977 14601140 - MGP_WSBEiJ_P0035497 Sugct protein_coding protein_coding MGP_WSBEiJ_T0035498.1 MGP_WSBEiJ_G0019592.1 mouse_genomes_project 13 14204331 14590468 - MGP_WSBEiJ_P0035498 Sugct protein_coding unknown_likely_coding MGP_WSBEiJ_T0009778.1 MGP_WSBEiJ_G0007935.1 mouse_genomes_project 13 47076470 47076564 - Mirlet7a-1 miRNA miRNA MGP_WSBEiJ_T0006414.1 MGP_WSBEiJ_G0005328.1 mouse_genomes_project 13 2385337 2388569 - lincRNA lincRNA MGP_WSBEiJ_T0006415.1 MGP_WSBEiJ_G0005328.1 mouse_genomes_project 13 2385337 2388195 - lincRNA lincRNA MGP_WSBEiJ_T0009799.1 MGP_WSBEiJ_G0007956.1 mouse_genomes_project 13 87728656 87728766 + Gm24935 miRNA miRNA MGP_WSBEiJ_T0035458.1 MGP_WSBEiJ_G0019578.1 mouse_genomes_project 13 10254727 10254955 + MGP_WSBEiJ_P0035458 Gm2399 protein_coding protein_coding MGP_WSBEiJ_T0035803.1 MGP_WSBEiJ_G0019750.1 mouse_genomes_project 13 28651548 28652735 - MGP_WSBEiJ_P0035803 Hus1b protein_coding protein_coding MGP_WSBEiJ_T0036303.1 MGP_WSBEiJ_G0019920.1 mouse_genomes_project 13 54367791 54368205 - MGP_WSBEiJ_P0036303 Pfn3 protein_coding protein_coding MGP_WSBEiJ_T0011148.1 MGP_WSBEiJ_G0009305.1 mouse_genomes_project 13 10624525 10624815 + Gm25271 misc_RNA misc_RNA MGP_WSBEiJ_T0100527.1 MGP_WSBEiJ_G0038985.1 mouse_genomes_project 13 19529395 19530499 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036630.1 MGP_WSBEiJ_G0020047.1 mouse_genomes_project 13 67521907 67533201 + MGP_WSBEiJ_P0036630 Zfp273 protein_coding protein_coding MGP_WSBEiJ_T0036631.1 MGP_WSBEiJ_G0020047.1 mouse_genomes_project 13 67521979 67523431 + Zfp273 protein_coding retained_intron MGP_WSBEiJ_T0035776.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 26804396 27504261 - MGP_WSBEiJ_P0035776 Cdkal1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035777.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 26951897 27504288 - MGP_WSBEiJ_P0035777 Cdkal1 protein_coding protein_coding MGP_WSBEiJ_T0035778.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27031771 27106054 - MGP_WSBEiJ_P0035778 Cdkal1 protein_coding protein_coding MGP_WSBEiJ_T0035779.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27071861 27152413 - MGP_WSBEiJ_P0035779 Cdkal1 protein_coding protein_coding MGP_WSBEiJ_T0035780.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27105314 27504257 - Cdkal1 protein_coding retained_intron MGP_WSBEiJ_T0035781.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27149165 27504257 - Cdkal1 protein_coding retained_intron MGP_WSBEiJ_T0035782.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27158219 27504253 - MGP_WSBEiJ_P0035782 Cdkal1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035783.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27352068 27504271 - Cdkal1 protein_coding retained_intron MGP_WSBEiJ_T0035784.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27421608 27504045 - MGP_WSBEiJ_P0035784 Cdkal1 protein_coding protein_coding MGP_WSBEiJ_T0035785.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27447044 27504277 - MGP_WSBEiJ_P0035785 Cdkal1 protein_coding protein_coding MGP_WSBEiJ_T0035786.1 MGP_WSBEiJ_G0019742.1 mouse_genomes_project 13 27483335 27504279 - MGP_WSBEiJ_P0035786 Cdkal1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035336.1 MGP_WSBEiJ_G0019541.1 mouse_genomes_project 13 428484 439057 + MGP_WSBEiJ_P0035336 Tubal3 protein_coding protein_coding MGP_WSBEiJ_T0036849.1 MGP_WSBEiJ_G0020118.1 mouse_genomes_project 13 89146701 89537919 + MGP_WSBEiJ_P0036849 Edil3 protein_coding protein_coding MGP_WSBEiJ_T0036850.1 MGP_WSBEiJ_G0020118.1 mouse_genomes_project 13 89146717 89470082 + Edil3 protein_coding processed_transcript MGP_WSBEiJ_T0036851.1 MGP_WSBEiJ_G0020118.1 mouse_genomes_project 13 89146740 89663514 + MGP_WSBEiJ_P0036851 Edil3 protein_coding protein_coding MGP_WSBEiJ_T0036852.1 MGP_WSBEiJ_G0020118.1 mouse_genomes_project 13 89146786 89311543 + Edil3 protein_coding retained_intron MGP_WSBEiJ_T0036853.1 MGP_WSBEiJ_G0020118.1 mouse_genomes_project 13 89146789 89155137 + Edil3 protein_coding processed_transcript MGP_WSBEiJ_T0036854.1 MGP_WSBEiJ_G0020118.1 mouse_genomes_project 13 89146843 89375302 + Edil3 protein_coding retained_intron MGP_WSBEiJ_T0036855.1 MGP_WSBEiJ_G0020118.1 mouse_genomes_project 13 89146847 89428652 + Edil3 protein_coding retained_intron MGP_WSBEiJ_T0036856.1 MGP_WSBEiJ_G0020118.1 mouse_genomes_project 13 89146871 89663514 + MGP_WSBEiJ_P0036856 Edil3 protein_coding protein_coding MGP_WSBEiJ_T0036260.1 MGP_WSBEiJ_G0019907.1 mouse_genomes_project 13 53851688 53913077 + MGP_WSBEiJ_P0036260 Unc5a protein_coding protein_coding MGP_WSBEiJ_T0036261.1 MGP_WSBEiJ_G0019907.1 mouse_genomes_project 13 53851688 53913077 + MGP_WSBEiJ_P0036261 Unc5a protein_coding protein_coding MGP_WSBEiJ_T0036262.1 MGP_WSBEiJ_G0019907.1 mouse_genomes_project 13 53903600 53906844 + MGP_WSBEiJ_P0036262 Unc5a protein_coding protein_coding MGP_WSBEiJ_T0036263.1 MGP_WSBEiJ_G0019907.1 mouse_genomes_project 13 53910068 53911712 + Unc5a protein_coding retained_intron MGP_WSBEiJ_T0036264.1 MGP_WSBEiJ_G0019907.1 mouse_genomes_project 13 53910738 53912545 + MGP_WSBEiJ_P0036264 Unc5a protein_coding protein_coding MGP_WSBEiJ_T0036956.1 MGP_WSBEiJ_G0020150.1 mouse_genomes_project 13 94573119 94717238 + MGP_WSBEiJ_P0036956 Lhfpl2 protein_coding protein_coding MGP_WSBEiJ_T0036957.1 MGP_WSBEiJ_G0020150.1 mouse_genomes_project 13 94573155 94640952 + Lhfpl2 protein_coding retained_intron MGP_WSBEiJ_T0036958.1 MGP_WSBEiJ_G0020150.1 mouse_genomes_project 13 94599979 94695423 + MGP_WSBEiJ_P0036958 Lhfpl2 protein_coding protein_coding MGP_WSBEiJ_T0036959.1 MGP_WSBEiJ_G0020150.1 mouse_genomes_project 13 94652146 94695109 + MGP_WSBEiJ_P0036959 Lhfpl2 protein_coding protein_coding MGP_WSBEiJ_T0036960.1 MGP_WSBEiJ_G0020150.1 mouse_genomes_project 13 94693593 94716346 + MGP_WSBEiJ_P0036960 Lhfpl2 protein_coding protein_coding MGP_WSBEiJ_T0036961.1 MGP_WSBEiJ_G0020150.1 mouse_genomes_project 13 94694556 94694996 + Lhfpl2 protein_coding processed_transcript MGP_WSBEiJ_T0036962.1 MGP_WSBEiJ_G0020150.1 mouse_genomes_project 13 94694774 94717238 + MGP_WSBEiJ_P0036962 Lhfpl2 protein_coding protein_coding MGP_WSBEiJ_T0036955.1 MGP_WSBEiJ_G0020149.1 mouse_genomes_project 13 94282165 94460088 + MGP_WSBEiJ_P0036955 Arsb protein_coding protein_coding MGP_WSBEiJ_T0006499.1 MGP_WSBEiJ_G0005387.1 mouse_genomes_project 13 72492102 72492932 - Gm20554 lincRNA lincRNA MGP_WSBEiJ_T0009769.1 MGP_WSBEiJ_G0007926.1 mouse_genomes_project 13 21241057 21241186 - Gm44344 miRNA miRNA MGP_WSBEiJ_T0100554.1 MGP_WSBEiJ_G0039012.1 mouse_genomes_project 13 30913649 30915721 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035407.1 MGP_WSBEiJ_G0019564.1 mouse_genomes_project 13 5647443 5729223 + MGP_WSBEiJ_P0035407 Larp4b protein_coding unknown_likely_coding MGP_WSBEiJ_T0035408.1 MGP_WSBEiJ_G0019564.1 mouse_genomes_project 13 5647525 5725935 + MGP_WSBEiJ_P0035408 Larp4b protein_coding protein_coding MGP_WSBEiJ_T0035409.1 MGP_WSBEiJ_G0019564.1 mouse_genomes_project 13 5647551 5726127 + MGP_WSBEiJ_P0035409 Larp4b protein_coding protein_coding MGP_WSBEiJ_T0035410.1 MGP_WSBEiJ_G0019564.1 mouse_genomes_project 13 5647556 5678027 + MGP_WSBEiJ_P0035410 Larp4b protein_coding protein_coding MGP_WSBEiJ_T0035411.1 MGP_WSBEiJ_G0019564.1 mouse_genomes_project 13 5647626 5729264 + MGP_WSBEiJ_P0035411 Larp4b protein_coding protein_coding MGP_WSBEiJ_T0035412.1 MGP_WSBEiJ_G0019564.1 mouse_genomes_project 13 5690456 5691206 + Larp4b protein_coding processed_transcript MGP_WSBEiJ_T0035413.1 MGP_WSBEiJ_G0019564.1 mouse_genomes_project 13 5723191 5727934 + Larp4b protein_coding retained_intron MGP_WSBEiJ_T0009774.1 MGP_WSBEiJ_G0007931.1 mouse_genomes_project 13 40854790 40854881 + Gm23086 miRNA miRNA MGP_WSBEiJ_T0037267.1 MGP_WSBEiJ_G0020245.1 mouse_genomes_project 13 111588034 111592733 - MGP_WSBEiJ_P0037267 Gapt protein_coding protein_coding MGP_WSBEiJ_T0100567.1 MGP_WSBEiJ_G0039025.1 mouse_genomes_project 13 107294451 107295007 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006416.1 MGP_WSBEiJ_G0005329.1 mouse_genomes_project 13 5960594 5965211 + Gm26601 lincRNA lincRNA MGP_WSBEiJ_T0006428.1 MGP_WSBEiJ_G0005339.1 mouse_genomes_project 13 26544800 26553203 + Gm26735 lincRNA lincRNA MGP_WSBEiJ_T0036177.1 MGP_WSBEiJ_G0019887.1 mouse_genomes_project 13 52289710 52295860 - MGP_WSBEiJ_P0036177 Msx2 protein_coding protein_coding MGP_WSBEiJ_T0036178.1 MGP_WSBEiJ_G0019887.1 mouse_genomes_project 13 52294291 52295860 - Msx2 protein_coding retained_intron MGP_WSBEiJ_T0099047.1 MGP_WSBEiJ_G0037710.1 mouse_genomes_project 13 45187358 45187488 - Gm24620 snoRNA snoRNA MGP_WSBEiJ_T0006435.1 MGP_WSBEiJ_G0005343.1 mouse_genomes_project 13 29011248 29109080 + Gm11376 lincRNA lincRNA MGP_WSBEiJ_T0037028.1 MGP_WSBEiJ_G0020174.1 mouse_genomes_project 13 97657258 97669444 - MGP_WSBEiJ_P0037028 1700029F12Rik protein_coding protein_coding MGP_WSBEiJ_T0100536.1 MGP_WSBEiJ_G0038994.1 mouse_genomes_project 13 19878619 19879163 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035442.1 MGP_WSBEiJ_G0019569.1 mouse_genomes_project 13 8819721 8892031 - MGP_WSBEiJ_P0035442 Mtr protein_coding protein_coding MGP_WSBEiJ_T0036567.1 MGP_WSBEiJ_G0020015.1 mouse_genomes_project 13 66452482 66457254 - MGP_WSBEiJ_P0036567 Uqcrb protein_coding protein_coding MGP_WSBEiJ_T0036568.1 MGP_WSBEiJ_G0020015.1 mouse_genomes_project 13 66452929 66454659 - Uqcrb protein_coding processed_transcript MGP_WSBEiJ_T0036222.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53568970 53577643 - MGP_WSBEiJ_P0036222 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036223.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53568973 53574018 - MGP_WSBEiJ_P0036223 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036224.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53568979 53583462 - MGP_WSBEiJ_P0036224 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036225.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53568983 53577737 - MGP_WSBEiJ_P0036225 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036226.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53572214 53573646 - Rnf44 protein_coding retained_intron MGP_WSBEiJ_T0036227.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53572619 53583401 - MGP_WSBEiJ_P0036227 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036228.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53572695 53577217 - MGP_WSBEiJ_P0036228 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036229.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53573058 53573981 - Rnf44 protein_coding retained_intron MGP_WSBEiJ_T0036230.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53573183 53577749 - MGP_WSBEiJ_P0036230 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036231.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53573279 53577806 - MGP_WSBEiJ_P0036231 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036232.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53573537 53583367 - MGP_WSBEiJ_P0036232 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036233.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53573603 53576816 - Rnf44 protein_coding processed_transcript MGP_WSBEiJ_T0036234.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53573614 53583405 - Rnf44 protein_coding processed_transcript MGP_WSBEiJ_T0036235.1 MGP_WSBEiJ_G0019901.1 mouse_genomes_project 13 53573623 53577822 - MGP_WSBEiJ_P0036235 Rnf44 protein_coding protein_coding MGP_WSBEiJ_T0036302.1 MGP_WSBEiJ_G0019919.1 mouse_genomes_project 13 54352709 54367734 + MGP_WSBEiJ_P0036302 Slc34a1 protein_coding protein_coding MGP_WSBEiJ_T0036925.1 MGP_WSBEiJ_G0020137.1 mouse_genomes_project 13 92943362 92989673 - MGP_WSBEiJ_P0036925 Zfyve16 protein_coding protein_coding MGP_WSBEiJ_T0036926.1 MGP_WSBEiJ_G0020137.1 mouse_genomes_project 13 92944103 92975794 - Zfyve16 protein_coding retained_intron MGP_WSBEiJ_T0036927.1 MGP_WSBEiJ_G0020137.1 mouse_genomes_project 13 92966995 92968308 - Zfyve16 protein_coding retained_intron MGP_WSBEiJ_T0036928.1 MGP_WSBEiJ_G0020137.1 mouse_genomes_project 13 92972489 92980347 - Zfyve16 protein_coding processed_transcript MGP_WSBEiJ_T0036905.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92651747 92805245 - MGP_WSBEiJ_P0036905 Msh3 protein_coding protein_coding MGP_WSBEiJ_T0036906.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92651755 92681818 - Msh3 protein_coding processed_transcript MGP_WSBEiJ_T0036907.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92651756 92709399 - Msh3 protein_coding retained_intron MGP_WSBEiJ_T0036908.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92651757 92805249 - MGP_WSBEiJ_P0036908 Msh3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036909.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92651761 92692863 - Msh3 protein_coding retained_intron MGP_WSBEiJ_T0036910.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92651761 92805253 - MGP_WSBEiJ_P0036910 Msh3 protein_coding protein_coding MGP_WSBEiJ_T0036911.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92652132 92676279 - MGP_WSBEiJ_P0036911 Msh3 protein_coding protein_coding MGP_WSBEiJ_T0036912.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92692643 92805235 - MGP_WSBEiJ_P0036912 Msh3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036914.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92753395 92755356 - Msh3 protein_coding retained_intron MGP_WSBEiJ_T0036915.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92755078 92805246 - MGP_WSBEiJ_P0036915 Msh3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036916.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92758435 92795946 - Msh3 protein_coding retained_intron MGP_WSBEiJ_T0036917.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92791021 92804765 - Msh3 protein_coding processed_transcript MGP_WSBEiJ_T0036918.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92796436 92805203 - Msh3 protein_coding retained_intron MGP_WSBEiJ_T0036919.1 MGP_WSBEiJ_G0020132.1 mouse_genomes_project 13 92801369 92805235 - MGP_WSBEiJ_P0036919 Msh3 protein_coding protein_coding MGP_WSBEiJ_T0036194.1 MGP_WSBEiJ_G0019895.1 mouse_genomes_project 13 53430975 53449073 - 4833439L19Rik protein_coding processed_transcript MGP_WSBEiJ_T0036195.1 MGP_WSBEiJ_G0019895.1 mouse_genomes_project 13 53435277 53449091 - MGP_WSBEiJ_P0036195 4833439L19Rik protein_coding protein_coding MGP_WSBEiJ_T0036196.1 MGP_WSBEiJ_G0019895.1 mouse_genomes_project 13 53439934 53449031 - 4833439L19Rik protein_coding retained_intron MGP_WSBEiJ_T0036197.1 MGP_WSBEiJ_G0019895.1 mouse_genomes_project 13 53440108 53449078 - 4833439L19Rik protein_coding retained_intron MGP_WSBEiJ_T0036198.1 MGP_WSBEiJ_G0019895.1 mouse_genomes_project 13 53440327 53449070 - MGP_WSBEiJ_P0036198 4833439L19Rik protein_coding protein_coding MGP_WSBEiJ_T0036199.1 MGP_WSBEiJ_G0019895.1 mouse_genomes_project 13 53445311 53449084 - 4833439L19Rik protein_coding retained_intron MGP_WSBEiJ_T0036200.1 MGP_WSBEiJ_G0019895.1 mouse_genomes_project 13 53445433 53449096 - MGP_WSBEiJ_P0036200 4833439L19Rik protein_coding protein_coding MGP_WSBEiJ_T0036201.1 MGP_WSBEiJ_G0019895.1 mouse_genomes_project 13 53445448 53449065 - MGP_WSBEiJ_P0036201 4833439L19Rik protein_coding protein_coding MGP_WSBEiJ_T0035499.1 MGP_WSBEiJ_G0019593.1 mouse_genomes_project 13 14624448 14716160 - MGP_WSBEiJ_P0035499 Cdk13 protein_coding protein_coding MGP_WSBEiJ_T0035500.1 MGP_WSBEiJ_G0019593.1 mouse_genomes_project 13 14626547 14715714 - MGP_WSBEiJ_P0035500 Cdk13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012644.1 MGP_WSBEiJ_G0010774.1 mouse_genomes_project 13 64462458 64462800 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035495.1 MGP_WSBEiJ_G0019591.1 mouse_genomes_project 13 12877836 12895046 + MGP_WSBEiJ_P0035495 Inhba protein_coding protein_coding MGP_WSBEiJ_T0035496.1 MGP_WSBEiJ_G0019591.1 mouse_genomes_project 13 12880465 12895069 + MGP_WSBEiJ_P0035496 Inhba protein_coding protein_coding MGP_WSBEiJ_T0035613.1 MGP_WSBEiJ_G0019652.1 mouse_genomes_project 13 19442034 19442940 + MGP_WSBEiJ_P0035613 Vmn1r196 protein_coding protein_coding MGP_WSBEiJ_T0097821.1 MGP_WSBEiJ_G0036484.1 mouse_genomes_project 13 94473437 94473537 + Gm24737 snRNA snRNA MGP_WSBEiJ_T0099063.1 MGP_WSBEiJ_G0037726.1 mouse_genomes_project 13 77670430 77670561 + Gm26088 snoRNA snoRNA MGP_WSBEiJ_T0100524.1 MGP_WSBEiJ_G0038982.1 mouse_genomes_project 13 19184859 19185375 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0096953.1 MGP_WSBEiJ_G0035634.1 mouse_genomes_project 13 118271415 118271506 + Gm23198 rRNA rRNA MGP_WSBEiJ_T0036265.1 MGP_WSBEiJ_G0019908.1 mouse_genomes_project 13 53913050 53928374 - MGP_WSBEiJ_P0036265 Hk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036266.1 MGP_WSBEiJ_G0019908.1 mouse_genomes_project 13 53913126 53927982 - MGP_WSBEiJ_P0036266 Hk3 protein_coding protein_coding MGP_WSBEiJ_T0036267.1 MGP_WSBEiJ_G0019908.1 mouse_genomes_project 13 53913229 53928332 - MGP_WSBEiJ_P0036267 Hk3 protein_coding protein_coding MGP_WSBEiJ_T0036268.1 MGP_WSBEiJ_G0019908.1 mouse_genomes_project 13 53922114 53928375 - MGP_WSBEiJ_P0036268 Hk3 protein_coding protein_coding MGP_WSBEiJ_T0036269.1 MGP_WSBEiJ_G0019908.1 mouse_genomes_project 13 53922164 53928400 - MGP_WSBEiJ_P0036269 Hk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036270.1 MGP_WSBEiJ_G0019908.1 mouse_genomes_project 13 53922852 53928295 - MGP_WSBEiJ_P0036270 Hk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037270.1 MGP_WSBEiJ_G0020248.1 mouse_genomes_project 13 112725579 112793026 - MGP_WSBEiJ_P0037270 Gpbp1 protein_coding protein_coding MGP_WSBEiJ_T0037271.1 MGP_WSBEiJ_G0020248.1 mouse_genomes_project 13 112725831 112792943 - MGP_WSBEiJ_P0037271 Gpbp1 protein_coding protein_coding MGP_WSBEiJ_T0037272.1 MGP_WSBEiJ_G0020248.1 mouse_genomes_project 13 112726056 112790328 - MGP_WSBEiJ_P0037272 Gpbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037273.1 MGP_WSBEiJ_G0020248.1 mouse_genomes_project 13 112737953 112754399 - Gpbp1 protein_coding processed_transcript MGP_WSBEiJ_T0037274.1 MGP_WSBEiJ_G0020248.1 mouse_genomes_project 13 112740544 112754358 - Gpbp1 protein_coding processed_transcript MGP_WSBEiJ_T0037275.1 MGP_WSBEiJ_G0020248.1 mouse_genomes_project 13 112740614 112754399 - Gpbp1 protein_coding retained_intron MGP_WSBEiJ_T0036445.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58834794 58850432 + MGP_WSBEiJ_P0036445 Naa35 protein_coding protein_coding MGP_WSBEiJ_T0036446.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58834830 58885894 + MGP_WSBEiJ_P0036446 Naa35 protein_coding protein_coding MGP_WSBEiJ_T0036447.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58834929 58859453 + MGP_WSBEiJ_P0036447 Naa35 protein_coding protein_coding MGP_WSBEiJ_T0036448.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58835705 58875660 + MGP_WSBEiJ_P0036448 Naa35 protein_coding protein_coding MGP_WSBEiJ_T0036449.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58846000 58850905 + Naa35 protein_coding retained_intron MGP_WSBEiJ_T0036450.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58848757 58869182 + MGP_WSBEiJ_P0036450 Naa35 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036451.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58859898 58878776 + Naa35 protein_coding retained_intron MGP_WSBEiJ_T0036452.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58860023 58876591 + Naa35 protein_coding retained_intron MGP_WSBEiJ_T0036453.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58860058 58876617 + Naa35 protein_coding retained_intron MGP_WSBEiJ_T0036454.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58860143 58875732 + MGP_WSBEiJ_P0036454 Naa35 protein_coding protein_coding MGP_WSBEiJ_T0036455.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58869148 58885862 + Naa35 protein_coding processed_transcript MGP_WSBEiJ_T0036456.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58869198 58876807 + Naa35 protein_coding retained_intron MGP_WSBEiJ_T0036457.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58869199 58879106 + MGP_WSBEiJ_P0036457 Naa35 protein_coding protein_coding MGP_WSBEiJ_T0036458.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58875586 58880098 + Naa35 protein_coding retained_intron MGP_WSBEiJ_T0036459.1 MGP_WSBEiJ_G0019963.1 mouse_genomes_project 13 58883875 58885790 + Naa35 protein_coding retained_intron MGP_WSBEiJ_T0035627.1 MGP_WSBEiJ_G0019666.1 mouse_genomes_project 13 20317429 20318326 + MGP_WSBEiJ_P0035627 Vmn1r216 protein_coding protein_coding MGP_WSBEiJ_T0036475.1 MGP_WSBEiJ_G0019975.1 mouse_genomes_project 13 60088053 60092508 - MGP_WSBEiJ_P0036475 BC051665 protein_coding protein_coding MGP_WSBEiJ_T0035618.1 MGP_WSBEiJ_G0019657.1 mouse_genomes_project 13 19542181 19544097 + MGP_WSBEiJ_P0035618 protein_coding protein_coding MGP_WSBEiJ_T0100528.1 MGP_WSBEiJ_G0038986.1 mouse_genomes_project 13 19532506 19533392 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036100.1 MGP_WSBEiJ_G0019865.1 mouse_genomes_project 13 48183883 48197102 + MGP_WSBEiJ_P0036100 Omd protein_coding protein_coding MGP_WSBEiJ_T0012653.1 MGP_WSBEiJ_G0010783.1 mouse_genomes_project 13 73228050 73228260 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006550.1 MGP_WSBEiJ_G0005423.1 mouse_genomes_project 13 121433181 121434726 + 1700074H08Rik lincRNA lincRNA MGP_WSBEiJ_T0097806.1 MGP_WSBEiJ_G0036469.1 mouse_genomes_project 13 37946813 37946978 - Gm23972 snRNA snRNA MGP_WSBEiJ_T0012674.1 MGP_WSBEiJ_G0010804.1 mouse_genomes_project 13 104395633 104396116 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037217.1 MGP_WSBEiJ_G0020235.1 mouse_genomes_project 13 108059677 108126464 - MGP_WSBEiJ_P0037217 Kif2a protein_coding protein_coding MGP_WSBEiJ_T0037218.1 MGP_WSBEiJ_G0020235.1 mouse_genomes_project 13 108061896 108126460 - MGP_WSBEiJ_P0037218 Kif2a protein_coding protein_coding MGP_WSBEiJ_T0037219.1 MGP_WSBEiJ_G0020235.1 mouse_genomes_project 13 108062719 108126472 - MGP_WSBEiJ_P0037219 Kif2a protein_coding protein_coding MGP_WSBEiJ_T0037220.1 MGP_WSBEiJ_G0020235.1 mouse_genomes_project 13 108062989 108100769 - MGP_WSBEiJ_P0037220 Kif2a protein_coding protein_coding MGP_WSBEiJ_T0037221.1 MGP_WSBEiJ_G0020235.1 mouse_genomes_project 13 108064623 108126373 - MGP_WSBEiJ_P0037221 Kif2a protein_coding protein_coding MGP_WSBEiJ_T0037222.1 MGP_WSBEiJ_G0020235.1 mouse_genomes_project 13 108070295 108079632 - MGP_WSBEiJ_P0037222 Kif2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037223.1 MGP_WSBEiJ_G0020235.1 mouse_genomes_project 13 108082820 108126094 - MGP_WSBEiJ_P0037223 Kif2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037224.1 MGP_WSBEiJ_G0020235.1 mouse_genomes_project 13 108091342 108097933 - MGP_WSBEiJ_P0037224 Kif2a protein_coding protein_coding MGP_WSBEiJ_T0035334.1 MGP_WSBEiJ_G0019540.1 mouse_genomes_project 13 384648 422010 - MGP_WSBEiJ_P0035334 Net1 protein_coding protein_coding MGP_WSBEiJ_T0035335.1 MGP_WSBEiJ_G0019540.1 mouse_genomes_project 13 384650 398675 - MGP_WSBEiJ_P0035335 Net1 protein_coding protein_coding MGP_WSBEiJ_T0036741.1 MGP_WSBEiJ_G0020097.1 mouse_genomes_project 13 76065493 76067638 - MGP_WSBEiJ_P0036741 Gpr150 protein_coding protein_coding MGP_WSBEiJ_T0000865.1 MGP_WSBEiJ_G0000803.1 mouse_genomes_project 13 99253520 99254083 - TEC TEC MGP_WSBEiJ_T0037280.1 MGP_WSBEiJ_G0020250.1 mouse_genomes_project 13 113059672 113126537 - MGP_WSBEiJ_P0037280 Map3k1 protein_coding protein_coding MGP_WSBEiJ_T0037281.1 MGP_WSBEiJ_G0020250.1 mouse_genomes_project 13 113062302 113064893 - Map3k1 protein_coding retained_intron MGP_WSBEiJ_T0037282.1 MGP_WSBEiJ_G0020250.1 mouse_genomes_project 13 113067096 113068228 - Map3k1 protein_coding retained_intron MGP_WSBEiJ_T0037283.1 MGP_WSBEiJ_G0020250.1 mouse_genomes_project 13 113081112 113082058 - Map3k1 protein_coding processed_transcript MGP_WSBEiJ_T0037284.1 MGP_WSBEiJ_G0020250.1 mouse_genomes_project 13 113081488 113124590 - MGP_WSBEiJ_P0037284 Map3k1 protein_coding protein_coding MGP_WSBEiJ_T0036845.1 MGP_WSBEiJ_G0020117.1 mouse_genomes_project 13 86273867 86275512 - MGP_WSBEiJ_P0036845 Cox7c protein_coding protein_coding MGP_WSBEiJ_T0036846.1 MGP_WSBEiJ_G0020117.1 mouse_genomes_project 13 86273867 86276994 - MGP_WSBEiJ_P0036846 Cox7c protein_coding protein_coding MGP_WSBEiJ_T0036847.1 MGP_WSBEiJ_G0020117.1 mouse_genomes_project 13 86273872 86275399 - MGP_WSBEiJ_P0036847 Cox7c protein_coding protein_coding MGP_WSBEiJ_T0036848.1 MGP_WSBEiJ_G0020117.1 mouse_genomes_project 13 86273946 86276864 - Cox7c protein_coding processed_transcript MGP_WSBEiJ_T0036891.1 MGP_WSBEiJ_G0020128.1 mouse_genomes_project 13 92195962 92242603 + MGP_WSBEiJ_P0036891 Acot12 protein_coding protein_coding MGP_WSBEiJ_T0036892.1 MGP_WSBEiJ_G0020128.1 mouse_genomes_project 13 92195983 92218079 + Acot12 protein_coding retained_intron MGP_WSBEiJ_T0036893.1 MGP_WSBEiJ_G0020128.1 mouse_genomes_project 13 92235743 92241359 + Acot12 protein_coding processed_transcript MGP_WSBEiJ_T0006496.1 MGP_WSBEiJ_G0005385.1 mouse_genomes_project 13 69579151 69585341 - Gm26819 lincRNA lincRNA MGP_WSBEiJ_T0003434.1 MGP_WSBEiJ_G0003133.1 mouse_genomes_project 13 107871298 107880209 + Gm28989 antisense antisense MGP_WSBEiJ_T0037059.1 MGP_WSBEiJ_G0020185.1 mouse_genomes_project 13 99078470 99080929 + MGP_WSBEiJ_P0037059 Foxd1 protein_coding protein_coding MGP_WSBEiJ_T0035756.1 MGP_WSBEiJ_G0019728.1 mouse_genomes_project 13 24877025 24886254 - MGP_WSBEiJ_P0035756 Prl8a6 protein_coding protein_coding MGP_WSBEiJ_T0035757.1 MGP_WSBEiJ_G0019728.1 mouse_genomes_project 13 24877025 24886214 - MGP_WSBEiJ_P0035757 Prl8a6 protein_coding protein_coding MGP_WSBEiJ_T0035758.1 MGP_WSBEiJ_G0019728.1 mouse_genomes_project 13 24877212 24886163 - MGP_WSBEiJ_P0035758 Prl8a6 protein_coding protein_coding MGP_WSBEiJ_T0006547.1 MGP_WSBEiJ_G0005422.1 mouse_genomes_project 13 120250988 120286319 + 1700003P14Rik lincRNA lincRNA MGP_WSBEiJ_T0006548.1 MGP_WSBEiJ_G0005422.1 mouse_genomes_project 13 120251780 120286241 + 1700003P14Rik lincRNA lincRNA MGP_WSBEiJ_T0006549.1 MGP_WSBEiJ_G0005422.1 mouse_genomes_project 13 120251796 120286244 + 1700003P14Rik lincRNA lincRNA MGP_WSBEiJ_T0035593.1 MGP_WSBEiJ_G0019641.1 mouse_genomes_project 13 18930895 19165296 - MGP_WSBEiJ_P0035593 Hist1h4n protein_coding protein_coding MGP_WSBEiJ_T0035830.1 MGP_WSBEiJ_G0019766.1 mouse_genomes_project 13 30960266 30968747 - MGP_WSBEiJ_P0035830 Serpinb9c protein_coding protein_coding MGP_WSBEiJ_T0035831.1 MGP_WSBEiJ_G0019766.1 mouse_genomes_project 13 30966860 30968891 - MGP_WSBEiJ_P0035831 Serpinb9c protein_coding protein_coding MGP_WSBEiJ_T0003362.1 MGP_WSBEiJ_G0003090.1 mouse_genomes_project 13 19136937 19137818 + Gm11290 antisense antisense MGP_WSBEiJ_T0003363.1 MGP_WSBEiJ_G0003090.1 mouse_genomes_project 13 19136937 19137840 + Gm11290 antisense antisense MGP_WSBEiJ_T0035457.1 MGP_WSBEiJ_G0019577.1 mouse_genomes_project 13 10254627 10340937 + MGP_WSBEiJ_P0035457 Nid1 protein_coding protein_coding MGP_WSBEiJ_T0006495.1 MGP_WSBEiJ_G0005384.1 mouse_genomes_project 13 68872043 68875598 + Gm26844 lincRNA lincRNA MGP_WSBEiJ_T0036011.1 MGP_WSBEiJ_G0019833.1 mouse_genomes_project 13 43731313 43755561 + MGP_WSBEiJ_P0036011 Mylip protein_coding protein_coding MGP_WSBEiJ_T0036627.1 MGP_WSBEiJ_G0020046.1 mouse_genomes_project 13 67478346 67491419 + MGP_WSBEiJ_P0036627 Zfp493 protein_coding protein_coding MGP_WSBEiJ_T0036628.1 MGP_WSBEiJ_G0020046.1 mouse_genomes_project 13 67478346 67488663 + MGP_WSBEiJ_P0036628 Zfp493 protein_coding protein_coding MGP_WSBEiJ_T0036629.1 MGP_WSBEiJ_G0020046.1 mouse_genomes_project 13 67485373 67489500 + Zfp493 protein_coding retained_intron MGP_WSBEiJ_T0036481.1 MGP_WSBEiJ_G0019980.1 mouse_genomes_project 13 60244717 60249413 - MGP_WSBEiJ_P0036481 Tpbpa protein_coding protein_coding MGP_WSBEiJ_T0036636.1 MGP_WSBEiJ_G0020051.1 mouse_genomes_project 13 68311084 68327648 + MGP_WSBEiJ_P0036636 1700001L19Rik protein_coding protein_coding MGP_WSBEiJ_T0035644.1 MGP_WSBEiJ_G0019677.1 mouse_genomes_project 13 20832422 20833166 + MGP_WSBEiJ_P0035644 Hist1h1d protein_coding protein_coding MGP_WSBEiJ_T0016763.1 MGP_WSBEiJ_G0014673.1 mouse_genomes_project 13 59030376 59032648 + Etohd2 processed_transcript processed_transcript MGP_WSBEiJ_T0016764.1 MGP_WSBEiJ_G0014673.1 mouse_genomes_project 13 59030377 59034389 + Etohd2 processed_transcript processed_transcript MGP_WSBEiJ_T0097281.1 MGP_WSBEiJ_G0035958.1 mouse_genomes_project 13 26854044 26854888 - Gm11364 sense_intronic sense_intronic MGP_WSBEiJ_T0000859.1 MGP_WSBEiJ_G0000797.1 mouse_genomes_project 13 85629737 85629975 - TEC TEC MGP_WSBEiJ_T0006465.1 MGP_WSBEiJ_G0005365.1 mouse_genomes_project 13 46446779 46507111 - 4931429P17Rik lincRNA lincRNA MGP_WSBEiJ_T0012646.1 MGP_WSBEiJ_G0010776.1 mouse_genomes_project 13 67061977 67062677 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037206.1 MGP_WSBEiJ_G0020232.1 mouse_genomes_project 13 106502741 106507183 + MGP_WSBEiJ_P0037206 Htr1a protein_coding protein_coding MGP_WSBEiJ_T0012591.1 MGP_WSBEiJ_G0010721.1 mouse_genomes_project 13 14898016 14903274 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036403.1 MGP_WSBEiJ_G0019957.1 mouse_genomes_project 13 57566263 57570729 - MGP_WSBEiJ_P0036403 2210016F16Rik protein_coding protein_coding MGP_WSBEiJ_T0035542.1 MGP_WSBEiJ_G0019609.1 mouse_genomes_project 13 18338523 18344824 - MGP_WSBEiJ_P0035542 Gpx5 protein_coding protein_coding MGP_WSBEiJ_T0035543.1 MGP_WSBEiJ_G0019609.1 mouse_genomes_project 13 18338523 18344779 - MGP_WSBEiJ_P0035543 Gpx5 protein_coding protein_coding MGP_WSBEiJ_T0000855.1 MGP_WSBEiJ_G0000793.1 mouse_genomes_project 13 68750444 68751961 + TEC TEC MGP_WSBEiJ_T0036536.1 MGP_WSBEiJ_G0019997.1 mouse_genomes_project 13 63624719 63658641 - MGP_WSBEiJ_P0036536 Slc35d2 protein_coding protein_coding MGP_WSBEiJ_T0036679.1 MGP_WSBEiJ_G0020070.1 mouse_genomes_project 13 73546098 73573858 + MGP_WSBEiJ_P0036679 Tert protein_coding protein_coding MGP_WSBEiJ_T0035805.1 MGP_WSBEiJ_G0019752.1 mouse_genomes_project 13 29279550 29282750 - MGP_WSBEiJ_P0035805 A530084C06Rik protein_coding protein_coding MGP_WSBEiJ_T0006471.1 MGP_WSBEiJ_G0005370.1 mouse_genomes_project 13 50722057 50726298 + Gm26651 lincRNA lincRNA MGP_WSBEiJ_T0037353.1 MGP_WSBEiJ_G0020284.1 mouse_genomes_project 13 120371428 120494228 + Fgf10 protein_coding processed_transcript MGP_WSBEiJ_T0037354.1 MGP_WSBEiJ_G0020284.1 mouse_genomes_project 13 120371461 120486479 + Fgf10 protein_coding processed_transcript MGP_WSBEiJ_T0037355.1 MGP_WSBEiJ_G0020284.1 mouse_genomes_project 13 120415799 120496804 + MGP_WSBEiJ_P0037355 Fgf10 protein_coding protein_coding MGP_WSBEiJ_T0036462.1 MGP_WSBEiJ_G0019965.1 mouse_genomes_project 13 58940121 58948663 - MGP_WSBEiJ_P0036462 4921517D22Rik protein_coding protein_coding MGP_WSBEiJ_T0100553.1 MGP_WSBEiJ_G0039011.1 mouse_genomes_project 13 30811068 30811226 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0011164.1 MGP_WSBEiJ_G0009321.1 mouse_genomes_project 13 109691714 109691969 - Gm27572 misc_RNA misc_RNA MGP_WSBEiJ_T0036309.1 MGP_WSBEiJ_G0019923.1 mouse_genomes_project 13 54419979 54428871 + MGP_WSBEiJ_P0036309 Prr7 protein_coding protein_coding MGP_WSBEiJ_T0036362.1 MGP_WSBEiJ_G0019940.1 mouse_genomes_project 13 55256990 55259619 - MGP_WSBEiJ_P0036362 Neurog1 protein_coding protein_coding MGP_WSBEiJ_T0036460.1 MGP_WSBEiJ_G0019964.1 mouse_genomes_project 13 58886091 58927805 - MGP_WSBEiJ_P0036460 Golm1 protein_coding protein_coding MGP_WSBEiJ_T0036461.1 MGP_WSBEiJ_G0019964.1 mouse_genomes_project 13 58886091 58927805 - MGP_WSBEiJ_P0036461 Golm1 protein_coding protein_coding MGP_WSBEiJ_T0035982.1 MGP_WSBEiJ_G0019822.1 mouse_genomes_project 13 41409787 41437084 - MGP_WSBEiJ_P0035982 Tbc1d7 protein_coding protein_coding MGP_WSBEiJ_T0035983.1 MGP_WSBEiJ_G0019822.1 mouse_genomes_project 13 41409787 41437084 - MGP_WSBEiJ_P0035983 Tbc1d7 protein_coding protein_coding MGP_WSBEiJ_T0036589.1 MGP_WSBEiJ_G0020023.1 mouse_genomes_project 13 66645269 66662648 - MGP_WSBEiJ_P0036589 Rslcan18 protein_coding protein_coding MGP_WSBEiJ_T0036591.1 MGP_WSBEiJ_G0020023.1 mouse_genomes_project 13 66659636 66664878 - Rslcan18 protein_coding retained_intron MGP_WSBEiJ_T0036345.1 MGP_WSBEiJ_G0019933.1 mouse_genomes_project 13 54671254 54686365 + MGP_WSBEiJ_P0036345 B230219D22Rik protein_coding protein_coding MGP_WSBEiJ_T0036610.1 MGP_WSBEiJ_G0020037.1 mouse_genomes_project 13 67024496 67052911 - MGP_WSBEiJ_P0036610 protein_coding protein_coding MGP_WSBEiJ_T0035649.1 MGP_WSBEiJ_G0019682.1 mouse_genomes_project 13 20866112 20907357 - MGP_WSBEiJ_P0035649 Hist1h2be protein_coding protein_coding MGP_WSBEiJ_T0035650.1 MGP_WSBEiJ_G0019682.1 mouse_genomes_project 13 20866113 20907387 - MGP_WSBEiJ_P0035650 Hist1h2be protein_coding protein_coding MGP_WSBEiJ_T0035651.1 MGP_WSBEiJ_G0019682.1 mouse_genomes_project 13 20905242 20907341 - Hist1h2be protein_coding processed_transcript MGP_WSBEiJ_T0035744.1 MGP_WSBEiJ_G0019721.1 mouse_genomes_project 13 24521001 24526846 + MGP_WSBEiJ_P0035744 protein_coding protein_coding MGP_WSBEiJ_T0006422.1 MGP_WSBEiJ_G0005334.1 mouse_genomes_project 13 21683702 21692849 - Gm11345 lincRNA lincRNA MGP_WSBEiJ_T0009803.1 MGP_WSBEiJ_G0007960.1 mouse_genomes_project 13 95053713 95053827 + Gm25109 miRNA miRNA MGP_WSBEiJ_T0036546.1 MGP_WSBEiJ_G0020001.1 mouse_genomes_project 13 63825251 63848637 - MGP_WSBEiJ_P0036546 Aaed1 protein_coding protein_coding MGP_WSBEiJ_T0100541.1 MGP_WSBEiJ_G0038999.1 mouse_genomes_project 13 20086132 20087093 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035899.1 MGP_WSBEiJ_G0019790.1 mouse_genomes_project 13 34837860 35020344 - MGP_WSBEiJ_P0035899 F13a1 protein_coding protein_coding MGP_WSBEiJ_T0035900.1 MGP_WSBEiJ_G0019790.1 mouse_genomes_project 13 34837860 35022248 - MGP_WSBEiJ_P0035900 F13a1 protein_coding protein_coding MGP_WSBEiJ_T0035931.1 MGP_WSBEiJ_G0019803.1 mouse_genomes_project 13 38090421 38398093 - MGP_WSBEiJ_P0035931 Ofcc1 protein_coding protein_coding MGP_WSBEiJ_T0037339.1 MGP_WSBEiJ_G0020274.1 mouse_genomes_project 13 116320191 116424437 - MGP_WSBEiJ_P0037339 Itga2 protein_coding protein_coding MGP_WSBEiJ_T0037046.1 MGP_WSBEiJ_G0020180.1 mouse_genomes_project 13 98611554 98929387 - MGP_WSBEiJ_P0037046 Arhgef28 protein_coding protein_coding MGP_WSBEiJ_T0036103.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48284368 48331249 + MGP_WSBEiJ_P0036103 Iars protein_coding protein_coding MGP_WSBEiJ_T0036104.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48284398 48331249 + MGP_WSBEiJ_P0036104 Iars protein_coding protein_coding MGP_WSBEiJ_T0036105.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48284459 48290589 + MGP_WSBEiJ_P0036105 Iars protein_coding protein_coding MGP_WSBEiJ_T0036106.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48289668 48330719 + MGP_WSBEiJ_P0036106 Iars protein_coding protein_coding MGP_WSBEiJ_T0036107.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48302810 48308779 + MGP_WSBEiJ_P0036107 Iars protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036108.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48303561 48312787 + Iars protein_coding retained_intron MGP_WSBEiJ_T0036109.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48305214 48312161 + Iars protein_coding retained_intron MGP_WSBEiJ_T0036110.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48314860 48320166 + Iars protein_coding retained_intron MGP_WSBEiJ_T0036111.1 MGP_WSBEiJ_G0019868.1 mouse_genomes_project 13 48319116 48320094 + Iars protein_coding retained_intron MGP_WSBEiJ_T0009792.1 MGP_WSBEiJ_G0007949.1 mouse_genomes_project 13 62795954 62796027 + Mir27b miRNA miRNA MGP_WSBEiJ_T0036733.1 MGP_WSBEiJ_G0020093.1 mouse_genomes_project 13 75843086 75853712 + MGP_WSBEiJ_P0036733 Glrx protein_coding protein_coding MGP_WSBEiJ_T0036365.1 MGP_WSBEiJ_G0019943.1 mouse_genomes_project 13 55459822 55495578 + MGP_WSBEiJ_P0036365 Slc25a48 protein_coding protein_coding MGP_WSBEiJ_T0096778.1 MGP_WSBEiJ_G0035459.1 mouse_genomes_project 13 110915300 110915697 + pseudogene pseudogene MGP_WSBEiJ_T0036045.1 MGP_WSBEiJ_G0019846.1 mouse_genomes_project 13 45518908 45532575 - Dek protein_coding processed_transcript MGP_WSBEiJ_T0036046.1 MGP_WSBEiJ_G0019846.1 mouse_genomes_project 13 45518915 45540326 - MGP_WSBEiJ_P0036046 Dek protein_coding protein_coding MGP_WSBEiJ_T0036047.1 MGP_WSBEiJ_G0019846.1 mouse_genomes_project 13 45522729 45540337 - MGP_WSBEiJ_P0036047 Dek protein_coding protein_coding MGP_WSBEiJ_T0036048.1 MGP_WSBEiJ_G0019846.1 mouse_genomes_project 13 45532291 45539966 - MGP_WSBEiJ_P0036048 Dek protein_coding protein_coding MGP_WSBEiJ_T0036049.1 MGP_WSBEiJ_G0019846.1 mouse_genomes_project 13 45535623 45540290 - Dek protein_coding processed_transcript MGP_WSBEiJ_T0036050.1 MGP_WSBEiJ_G0019846.1 mouse_genomes_project 13 45539517 45540319 - Dek protein_coding processed_transcript MGP_WSBEiJ_T0036614.1 MGP_WSBEiJ_G0020040.1 mouse_genomes_project 13 67091387 67131231 - MGP_WSBEiJ_P0036614 Gm26965 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036187.1 MGP_WSBEiJ_G0019894.1 mouse_genomes_project 13 53380709 53429870 + MGP_WSBEiJ_P0036187 Simc1 protein_coding protein_coding MGP_WSBEiJ_T0036188.1 MGP_WSBEiJ_G0019894.1 mouse_genomes_project 13 53380709 53429870 + MGP_WSBEiJ_P0036188 Simc1 protein_coding protein_coding MGP_WSBEiJ_T0036189.1 MGP_WSBEiJ_G0019894.1 mouse_genomes_project 13 53380734 53418421 + MGP_WSBEiJ_P0036189 Simc1 protein_coding protein_coding MGP_WSBEiJ_T0036190.1 MGP_WSBEiJ_G0019894.1 mouse_genomes_project 13 53380739 53418420 + MGP_WSBEiJ_P0036190 Simc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036191.1 MGP_WSBEiJ_G0019894.1 mouse_genomes_project 13 53389449 53402376 + Simc1 protein_coding processed_transcript MGP_WSBEiJ_T0036192.1 MGP_WSBEiJ_G0019894.1 mouse_genomes_project 13 53407053 53418537 + Simc1 protein_coding retained_intron MGP_WSBEiJ_T0036193.1 MGP_WSBEiJ_G0019894.1 mouse_genomes_project 13 53425470 53429366 + Simc1 protein_coding retained_intron MGP_WSBEiJ_T0035742.1 MGP_WSBEiJ_G0019720.1 mouse_genomes_project 13 24520995 24526846 + MGP_WSBEiJ_P0035742 protein_coding protein_coding MGP_WSBEiJ_T0006509.1 MGP_WSBEiJ_G0005394.1 mouse_genomes_project 13 83891509 83900394 - Gm26803 lincRNA lincRNA MGP_WSBEiJ_T0035799.1 MGP_WSBEiJ_G0019748.1 mouse_genomes_project 13 28444266 28462806 + MGP_WSBEiJ_P0035799 Irf4 protein_coding protein_coding MGP_WSBEiJ_T0035800.1 MGP_WSBEiJ_G0019748.1 mouse_genomes_project 13 28444266 28462806 + MGP_WSBEiJ_P0035800 Irf4 protein_coding protein_coding MGP_WSBEiJ_T0035861.1 MGP_WSBEiJ_G0019775.1 mouse_genomes_project 13 32084083 32092060 + MGP_WSBEiJ_P0035861 Psmg4 protein_coding protein_coding MGP_WSBEiJ_T0035862.1 MGP_WSBEiJ_G0019775.1 mouse_genomes_project 13 32084083 32092064 + MGP_WSBEiJ_P0035862 Psmg4 protein_coding protein_coding MGP_WSBEiJ_T0003365.1 MGP_WSBEiJ_G0003092.1 mouse_genomes_project 13 19724830 19725640 + Gm11314 antisense antisense MGP_WSBEiJ_T0009794.1 MGP_WSBEiJ_G0007951.1 mouse_genomes_project 13 62796450 62796518 + Mir24-1 miRNA miRNA MGP_WSBEiJ_T0035682.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21322462 21414845 - MGP_WSBEiJ_P0035682 Lrrc16a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035683.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21322602 21332695 - MGP_WSBEiJ_P0035683 Lrrc16a protein_coding protein_coding MGP_WSBEiJ_T0035684.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21322777 21596229 - MGP_WSBEiJ_P0035684 Lrrc16a protein_coding protein_coding MGP_WSBEiJ_T0035685.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21323179 21596163 - MGP_WSBEiJ_P0035685 Lrrc16a protein_coding protein_coding MGP_WSBEiJ_T0035686.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21339926 21363588 - Lrrc16a protein_coding processed_transcript MGP_WSBEiJ_T0035687.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21369087 21406084 - Lrrc16a protein_coding retained_intron MGP_WSBEiJ_T0035688.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21414820 21419082 - Lrrc16a protein_coding processed_transcript MGP_WSBEiJ_T0035689.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21443407 21596227 - Lrrc16a protein_coding retained_intron MGP_WSBEiJ_T0035690.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21444939 21460855 - Lrrc16a protein_coding processed_transcript MGP_WSBEiJ_T0035691.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21461082 21595933 - MGP_WSBEiJ_P0035691 Lrrc16a protein_coding protein_coding MGP_WSBEiJ_T0035692.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21470381 21514521 - MGP_WSBEiJ_P0035692 Lrrc16a protein_coding protein_coding MGP_WSBEiJ_T0035693.1 MGP_WSBEiJ_G0019704.1 mouse_genomes_project 13 21480403 21550541 - Lrrc16a protein_coding processed_transcript MGP_WSBEiJ_T0036693.1 MGP_WSBEiJ_G0020075.1 mouse_genomes_project 13 73855482 73886037 - MGP_WSBEiJ_P0036693 Trip13 protein_coding protein_coding MGP_WSBEiJ_T0036560.1 MGP_WSBEiJ_G0020012.1 mouse_genomes_project 13 64701244 64724851 - MGP_WSBEiJ_P0036560 Nlrp4f protein_coding protein_coding MGP_WSBEiJ_T0006533.1 MGP_WSBEiJ_G0005411.1 mouse_genomes_project 13 102319032 102388163 + lincRNA lincRNA MGP_WSBEiJ_T0036183.1 MGP_WSBEiJ_G0019892.1 mouse_genomes_project 13 53242296 53255943 + MGP_WSBEiJ_P0036183 Cplx2 protein_coding protein_coding MGP_WSBEiJ_T0037372.1 MGP_WSBEiJ_G0020289.1 mouse_genomes_project 13 121330667 121332109 + MGP_WSBEiJ_P0037372 protein_coding protein_coding MGP_WSBEiJ_T0036126.1 MGP_WSBEiJ_G0019871.1 mouse_genomes_project 13 49108758 49116807 + MGP_WSBEiJ_P0036126 Nutm2 protein_coding protein_coding MGP_WSBEiJ_T0000866.1 MGP_WSBEiJ_G0000804.1 mouse_genomes_project 13 100428150 100428980 + TEC TEC MGP_WSBEiJ_T0035462.1 MGP_WSBEiJ_G0019581.1 mouse_genomes_project 13 10793078 10839091 + MGP_WSBEiJ_P0035462 B3galnt2 protein_coding protein_coding MGP_WSBEiJ_T0036319.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54452529 54472925 - MGP_WSBEiJ_P0036319 Pdlim7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036320.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54455670 54472921 - Pdlim7 protein_coding retained_intron MGP_WSBEiJ_T0036321.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54456578 54472924 - Pdlim7 protein_coding retained_intron MGP_WSBEiJ_T0036322.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54456582 54472933 - MGP_WSBEiJ_P0036322 Pdlim7 protein_coding protein_coding MGP_WSBEiJ_T0036323.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54456814 54465900 - MGP_WSBEiJ_P0036323 Pdlim7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036324.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54466259 54472925 - MGP_WSBEiJ_P0036324 Pdlim7 protein_coding protein_coding MGP_WSBEiJ_T0036325.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54466260 54472925 - MGP_WSBEiJ_P0036325 Pdlim7 protein_coding protein_coding MGP_WSBEiJ_T0036326.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54466260 54472921 - MGP_WSBEiJ_P0036326 Pdlim7 protein_coding protein_coding MGP_WSBEiJ_T0036327.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54467038 54468507 - Pdlim7 protein_coding retained_intron MGP_WSBEiJ_T0036328.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54467719 54473163 - MGP_WSBEiJ_P0036328 Pdlim7 protein_coding protein_coding MGP_WSBEiJ_T0036329.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54468296 54472908 - Pdlim7 protein_coding retained_intron MGP_WSBEiJ_T0036330.1 MGP_WSBEiJ_G0019925.1 mouse_genomes_project 13 54468452 54472196 - MGP_WSBEiJ_P0036330 Pdlim7 protein_coding protein_coding MGP_WSBEiJ_T0035989.1 MGP_WSBEiJ_G0019828.1 mouse_genomes_project 13 41885039 41942057 + MGP_WSBEiJ_P0035989 Rnf182 protein_coding protein_coding MGP_WSBEiJ_T0035990.1 MGP_WSBEiJ_G0019828.1 mouse_genomes_project 13 41885312 41939167 + MGP_WSBEiJ_P0035990 Rnf182 protein_coding protein_coding MGP_WSBEiJ_T0037376.1 MGP_WSBEiJ_G0020293.1 mouse_genomes_project 13 121443557 121461174 + MGP_WSBEiJ_P0037376 Hmgcs1 protein_coding protein_coding MGP_WSBEiJ_T0011158.1 MGP_WSBEiJ_G0009315.1 mouse_genomes_project 13 55744941 55745066 + Gm27834 misc_RNA misc_RNA MGP_WSBEiJ_T0009773.1 MGP_WSBEiJ_G0007930.1 mouse_genomes_project 13 39010742 39010814 + Mir5124a miRNA miRNA MGP_WSBEiJ_T0100532.1 MGP_WSBEiJ_G0038990.1 mouse_genomes_project 13 19619589 19622879 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036026.1 MGP_WSBEiJ_G0019841.1 mouse_genomes_project 13 45098058 45146582 - MGP_WSBEiJ_P0036026 Nup153 protein_coding protein_coding MGP_WSBEiJ_T0036027.1 MGP_WSBEiJ_G0019841.1 mouse_genomes_project 13 45099228 45100106 - Nup153 protein_coding retained_intron MGP_WSBEiJ_T0036028.1 MGP_WSBEiJ_G0019841.1 mouse_genomes_project 13 45100998 45102171 - Nup153 protein_coding retained_intron MGP_WSBEiJ_T0036029.1 MGP_WSBEiJ_G0019841.1 mouse_genomes_project 13 45117826 45120301 - Nup153 protein_coding retained_intron MGP_WSBEiJ_T0036030.1 MGP_WSBEiJ_G0019841.1 mouse_genomes_project 13 45128062 45135957 - Nup153 protein_coding processed_transcript MGP_WSBEiJ_T0006424.1 MGP_WSBEiJ_G0005336.1 mouse_genomes_project 13 23308436 23319810 - Gm11351 lincRNA lincRNA MGP_WSBEiJ_T0036587.1 MGP_WSBEiJ_G0020022.1 mouse_genomes_project 13 66619016 66630337 - MGP_WSBEiJ_P0036587 protein_coding protein_coding MGP_WSBEiJ_T0036398.1 MGP_WSBEiJ_G0019954.1 mouse_genomes_project 13 57359675 57399466 - MGP_WSBEiJ_P0036398 Ubqln1 protein_coding protein_coding MGP_WSBEiJ_T0036399.1 MGP_WSBEiJ_G0019954.1 mouse_genomes_project 13 57359675 57399466 - MGP_WSBEiJ_P0036399 Ubqln1 protein_coding protein_coding MGP_WSBEiJ_T0099044.1 MGP_WSBEiJ_G0037707.1 mouse_genomes_project 13 33221668 33221799 - Gm22674 snoRNA snoRNA MGP_WSBEiJ_T0000851.1 MGP_WSBEiJ_G0000789.1 mouse_genomes_project 13 50764775 50766927 - TEC TEC MGP_WSBEiJ_T0009754.1 MGP_WSBEiJ_G0007911.1 mouse_genomes_project 13 461360 461484 - Gm22460 miRNA miRNA MGP_WSBEiJ_T0036571.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66458847 66468150 - MGP_WSBEiJ_P0036571 Mterf3 protein_coding protein_coding MGP_WSBEiJ_T0036572.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66463637 66484639 - MGP_WSBEiJ_P0036572 Mterf3 protein_coding protein_coding MGP_WSBEiJ_T0036573.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66463645 66484618 - MGP_WSBEiJ_P0036573 Mterf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036574.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66463756 66471216 - Mterf3 protein_coding processed_transcript MGP_WSBEiJ_T0036575.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66468562 66484259 - MGP_WSBEiJ_P0036575 Mterf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036576.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66468592 66481822 - MGP_WSBEiJ_P0036576 Mterf3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036577.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66474348 66484455 - MGP_WSBEiJ_P0036577 Mterf3 protein_coding protein_coding MGP_WSBEiJ_T0036578.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66479870 66481884 - MGP_WSBEiJ_P0036578 Mterf3 protein_coding protein_coding MGP_WSBEiJ_T0036579.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66481592 66484589 - MGP_WSBEiJ_P0036579 Mterf3 protein_coding protein_coding MGP_WSBEiJ_T0036580.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66482217 66484551 - Mterf3 protein_coding processed_transcript MGP_WSBEiJ_T0036581.1 MGP_WSBEiJ_G0020018.1 mouse_genomes_project 13 66482737 66484592 - Mterf3 protein_coding processed_transcript MGP_WSBEiJ_T0036051.1 MGP_WSBEiJ_G0019847.1 mouse_genomes_project 13 45556798 45688461 + MGP_WSBEiJ_P0036051 Rnf144b protein_coding protein_coding MGP_WSBEiJ_T0036052.1 MGP_WSBEiJ_G0019847.1 mouse_genomes_project 13 45633105 45688461 + MGP_WSBEiJ_P0036052 Rnf144b protein_coding protein_coding MGP_WSBEiJ_T0036624.1 MGP_WSBEiJ_G0020044.1 mouse_genomes_project 13 67382034 67396879 - MGP_WSBEiJ_P0036624 Zfp65 protein_coding protein_coding MGP_WSBEiJ_T0035789.1 MGP_WSBEiJ_G0019744.1 mouse_genomes_project 13 27811280 27932273 + MGP_WSBEiJ_P0035789 Mboat1 protein_coding protein_coding MGP_WSBEiJ_T0035790.1 MGP_WSBEiJ_G0019744.1 mouse_genomes_project 13 27811313 27915935 + MGP_WSBEiJ_P0035790 Mboat1 protein_coding protein_coding MGP_WSBEiJ_T0035791.1 MGP_WSBEiJ_G0019744.1 mouse_genomes_project 13 27811328 27842955 + Mboat1 protein_coding processed_transcript MGP_WSBEiJ_T0035792.1 MGP_WSBEiJ_G0019744.1 mouse_genomes_project 13 27811449 27932155 + MGP_WSBEiJ_P0035792 Mboat1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036097.1 MGP_WSBEiJ_G0019863.1 mouse_genomes_project 13 48101317 48130945 + MGP_WSBEiJ_P0036097 Ecm2 protein_coding protein_coding MGP_WSBEiJ_T0006507.1 MGP_WSBEiJ_G0005393.1 mouse_genomes_project 13 83889470 84054738 + lincRNA lincRNA MGP_WSBEiJ_T0006508.1 MGP_WSBEiJ_G0005393.1 mouse_genomes_project 13 83889470 83912017 + lincRNA lincRNA MGP_WSBEiJ_T0006510.1 MGP_WSBEiJ_G0005393.1 mouse_genomes_project 13 83897460 83906379 + lincRNA lincRNA MGP_WSBEiJ_T0006511.1 MGP_WSBEiJ_G0005393.1 mouse_genomes_project 13 83903364 83906231 + lincRNA lincRNA MGP_WSBEiJ_T0006512.1 MGP_WSBEiJ_G0005393.1 mouse_genomes_project 13 83909572 84066311 + lincRNA lincRNA MGP_WSBEiJ_T0037190.1 MGP_WSBEiJ_G0020225.1 mouse_genomes_project 13 105299613 105517088 + MGP_WSBEiJ_P0037190 Adamts6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037191.1 MGP_WSBEiJ_G0020225.1 mouse_genomes_project 13 105299854 105515158 + MGP_WSBEiJ_P0037191 Adamts6 protein_coding protein_coding MGP_WSBEiJ_T0100535.1 MGP_WSBEiJ_G0038993.1 mouse_genomes_project 13 19724501 19725494 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036953.1 MGP_WSBEiJ_G0020148.1 mouse_genomes_project 13 94174121 94260955 + MGP_WSBEiJ_P0036953 Dmgdh protein_coding protein_coding MGP_WSBEiJ_T0036954.1 MGP_WSBEiJ_G0020148.1 mouse_genomes_project 13 94216663 94217280 + Dmgdh protein_coding processed_transcript MGP_WSBEiJ_T0006515.1 MGP_WSBEiJ_G0005397.1 mouse_genomes_project 13 91810177 91831320 - A830009L08Rik lincRNA lincRNA MGP_WSBEiJ_T0006530.1 MGP_WSBEiJ_G0005408.1 mouse_genomes_project 13 100178597 100183457 - lincRNA lincRNA MGP_WSBEiJ_T0035852.1 MGP_WSBEiJ_G0019771.1 mouse_genomes_project 13 31877698 31903890 + MGP_WSBEiJ_P0035852 protein_coding protein_coding MGP_WSBEiJ_T0035853.1 MGP_WSBEiJ_G0019771.1 mouse_genomes_project 13 31877698 31903890 + MGP_WSBEiJ_P0035853 protein_coding protein_coding MGP_WSBEiJ_T0006452.1 MGP_WSBEiJ_G0005355.1 mouse_genomes_project 13 35430000 35430997 - Gm29458 lincRNA lincRNA MGP_WSBEiJ_T0099070.1 MGP_WSBEiJ_G0037733.1 mouse_genomes_project 13 95908737 95908869 + Gm22661 snoRNA snoRNA MGP_WSBEiJ_T0003403.1 MGP_WSBEiJ_G0003118.1 mouse_genomes_project 13 73630467 73640477 + Slc6a19os antisense antisense MGP_WSBEiJ_T0003404.1 MGP_WSBEiJ_G0003118.1 mouse_genomes_project 13 73634367 73639538 + Slc6a19os antisense antisense MGP_WSBEiJ_T0037341.1 MGP_WSBEiJ_G0020276.1 mouse_genomes_project 13 116592483 116594321 - MGP_WSBEiJ_P0037341 Pelo protein_coding protein_coding MGP_WSBEiJ_T0035749.1 MGP_WSBEiJ_G0019724.1 mouse_genomes_project 13 24707709 24721547 + MGP_WSBEiJ_P0035749 Prl3a1 protein_coding protein_coding MGP_WSBEiJ_T0036492.1 MGP_WSBEiJ_G0019990.1 mouse_genomes_project 13 62333438 62357267 - MGP_WSBEiJ_P0036492 Fbp2 protein_coding protein_coding MGP_WSBEiJ_T0035767.1 MGP_WSBEiJ_G0019734.1 mouse_genomes_project 13 25121710 25130770 - MGP_WSBEiJ_P0035767 Prl7a2 protein_coding protein_coding MGP_WSBEiJ_T0035916.1 MGP_WSBEiJ_G0019795.1 mouse_genomes_project 13 36052417 36077438 + MGP_WSBEiJ_P0035916 Riok1 protein_coding protein_coding MGP_WSBEiJ_T0036083.1 MGP_WSBEiJ_G0019858.1 mouse_genomes_project 13 47808630 47826152 - MGP_WSBEiJ_P0036083 Susd3 protein_coding protein_coding MGP_WSBEiJ_T0036084.1 MGP_WSBEiJ_G0019858.1 mouse_genomes_project 13 47808769 47826564 - MGP_WSBEiJ_P0036084 Susd3 protein_coding protein_coding MGP_WSBEiJ_T0036085.1 MGP_WSBEiJ_G0019858.1 mouse_genomes_project 13 47809243 47826521 - MGP_WSBEiJ_P0036085 Susd3 protein_coding protein_coding MGP_WSBEiJ_T0036086.1 MGP_WSBEiJ_G0019858.1 mouse_genomes_project 13 47815520 47818450 - Susd3 protein_coding processed_transcript MGP_WSBEiJ_T0036087.1 MGP_WSBEiJ_G0019858.1 mouse_genomes_project 13 47815818 47826012 - MGP_WSBEiJ_P0036087 Susd3 protein_coding protein_coding MGP_WSBEiJ_T0036088.1 MGP_WSBEiJ_G0019858.1 mouse_genomes_project 13 47816735 47820732 - Susd3 protein_coding processed_transcript MGP_WSBEiJ_T0035741.1 MGP_WSBEiJ_G0019719.1 mouse_genomes_project 13 24520877 24526776 + MGP_WSBEiJ_P0035741 protein_coding protein_coding MGP_WSBEiJ_T0035743.1 MGP_WSBEiJ_G0019719.1 mouse_genomes_project 13 24521001 24526840 + MGP_WSBEiJ_P0035743 protein_coding protein_coding MGP_WSBEiJ_T0009770.1 MGP_WSBEiJ_G0007927.1 mouse_genomes_project 13 26291603 26291696 - Mir6368 miRNA miRNA MGP_WSBEiJ_T0012606.1 MGP_WSBEiJ_G0010736.1 mouse_genomes_project 13 21229443 21229808 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037119.1 MGP_WSBEiJ_G0020207.1 mouse_genomes_project 13 101536508 101542958 + MGP_WSBEiJ_P0037119 Taf9 protein_coding protein_coding MGP_WSBEiJ_T0036289.1 MGP_WSBEiJ_G0019912.1 mouse_genomes_project 13 54076777 54093453 + MGP_WSBEiJ_P0036289 Fgfr4 protein_coding protein_coding MGP_WSBEiJ_T0036290.1 MGP_WSBEiJ_G0019912.1 mouse_genomes_project 13 54079830 54080819 + Fgfr4 protein_coding processed_transcript MGP_WSBEiJ_T0036291.1 MGP_WSBEiJ_G0019912.1 mouse_genomes_project 13 54080280 54081068 + Fgfr4 protein_coding retained_intron MGP_WSBEiJ_T0006446.1 MGP_WSBEiJ_G0005350.1 mouse_genomes_project 13 29339605 29340742 + Gm11378 lincRNA lincRNA MGP_WSBEiJ_T0006456.1 MGP_WSBEiJ_G0005359.1 mouse_genomes_project 13 39521356 39532900 + Gm26877 lincRNA lincRNA MGP_WSBEiJ_T0037013.1 MGP_WSBEiJ_G0020171.1 mouse_genomes_project 13 97177058 97272783 + MGP_WSBEiJ_P0037013 Col4a3bp protein_coding protein_coding MGP_WSBEiJ_T0037014.1 MGP_WSBEiJ_G0020171.1 mouse_genomes_project 13 97177175 97274938 + MGP_WSBEiJ_P0037014 Col4a3bp protein_coding protein_coding MGP_WSBEiJ_T0037015.1 MGP_WSBEiJ_G0020171.1 mouse_genomes_project 13 97177175 97274938 + MGP_WSBEiJ_P0037015 Col4a3bp protein_coding protein_coding MGP_WSBEiJ_T0036705.1 MGP_WSBEiJ_G0020082.1 mouse_genomes_project 13 74126397 74166778 - MGP_WSBEiJ_P0036705 Exoc3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036706.1 MGP_WSBEiJ_G0020082.1 mouse_genomes_project 13 74126721 74166786 - MGP_WSBEiJ_P0036706 Exoc3 protein_coding protein_coding MGP_WSBEiJ_T0012647.1 MGP_WSBEiJ_G0010777.1 mouse_genomes_project 13 67375989 67376846 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035774.1 MGP_WSBEiJ_G0019740.1 mouse_genomes_project 13 25703725 25713587 + MGP_WSBEiJ_P0035774 Prl5a1 protein_coding protein_coding MGP_WSBEiJ_T0006429.1 MGP_WSBEiJ_G0005340.1 mouse_genomes_project 13 26622087 26623380 + A330102I10Rik lincRNA lincRNA MGP_WSBEiJ_T0006430.1 MGP_WSBEiJ_G0005340.1 mouse_genomes_project 13 26622160 26638206 + A330102I10Rik lincRNA lincRNA MGP_WSBEiJ_T0006431.1 MGP_WSBEiJ_G0005340.1 mouse_genomes_project 13 26624003 26638274 + A330102I10Rik lincRNA lincRNA MGP_WSBEiJ_T0006432.1 MGP_WSBEiJ_G0005340.1 mouse_genomes_project 13 26624418 26649347 + A330102I10Rik lincRNA lincRNA MGP_WSBEiJ_T0037195.1 MGP_WSBEiJ_G0020227.1 mouse_genomes_project 13 105818840 105869393 + Srek1ip1 protein_coding processed_transcript MGP_WSBEiJ_T0037197.1 MGP_WSBEiJ_G0020227.1 mouse_genomes_project 13 105844927 105870310 + MGP_WSBEiJ_P0037197 Srek1ip1 protein_coding protein_coding MGP_WSBEiJ_T0037198.1 MGP_WSBEiJ_G0020227.1 mouse_genomes_project 13 105844989 105869705 + MGP_WSBEiJ_P0037198 Srek1ip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037199.1 MGP_WSBEiJ_G0020227.1 mouse_genomes_project 13 105854227 105863819 + Srek1ip1 protein_coding retained_intron MGP_WSBEiJ_T0037200.1 MGP_WSBEiJ_G0020227.1 mouse_genomes_project 13 105863595 105870307 + Srek1ip1 protein_coding retained_intron MGP_WSBEiJ_T0035635.1 MGP_WSBEiJ_G0019671.1 mouse_genomes_project 13 20677076 20679400 - MGP_WSBEiJ_P0035635 Abt1 protein_coding protein_coding MGP_WSBEiJ_T0036112.1 MGP_WSBEiJ_G0019869.1 mouse_genomes_project 13 48494132 48499611 - MGP_WSBEiJ_P0036112 Gm8674 protein_coding protein_coding MGP_WSBEiJ_T0100529.1 MGP_WSBEiJ_G0038987.1 mouse_genomes_project 13 19532676 19533403 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0035560.1 MGP_WSBEiJ_G0019615.1 mouse_genomes_project 13 18501543 18513070 - MGP_WSBEiJ_P0035560 Zscan26 protein_coding protein_coding MGP_WSBEiJ_T0035561.1 MGP_WSBEiJ_G0019615.1 mouse_genomes_project 13 18503898 18513073 - MGP_WSBEiJ_P0035561 Zscan26 protein_coding protein_coding MGP_WSBEiJ_T0035337.1 MGP_WSBEiJ_G0019542.1 mouse_genomes_project 13 445021 449677 - MGP_WSBEiJ_P0035337 Ucn3 protein_coding protein_coding MGP_WSBEiJ_T0006458.1 MGP_WSBEiJ_G0005361.1 mouse_genomes_project 13 42412308 42416348 + Gm5083 lincRNA lincRNA MGP_WSBEiJ_T0006459.1 MGP_WSBEiJ_G0005361.1 mouse_genomes_project 13 42412435 42416348 + Gm5083 lincRNA lincRNA MGP_WSBEiJ_T0036180.1 MGP_WSBEiJ_G0019889.1 mouse_genomes_project 13 52908818 52913280 - MGP_WSBEiJ_P0036180 Drd1 protein_coding protein_coding MGP_WSBEiJ_T0006489.1 MGP_WSBEiJ_G0005380.1 mouse_genomes_project 13 58990314 58993158 + lincRNA lincRNA MGP_WSBEiJ_T0006490.1 MGP_WSBEiJ_G0005380.1 mouse_genomes_project 13 58990319 58996804 + lincRNA lincRNA MGP_WSBEiJ_T0012631.1 MGP_WSBEiJ_G0010761.1 mouse_genomes_project 13 31922370 31923736 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037075.1 MGP_WSBEiJ_G0020195.1 mouse_genomes_project 13 100191980 100293084 - MGP_WSBEiJ_P0037075 Map1b protein_coding protein_coding MGP_WSBEiJ_T0036469.1 MGP_WSBEiJ_G0019970.1 mouse_genomes_project 13 59019266 59030188 - protein_coding retained_intron MGP_WSBEiJ_T0097794.1 MGP_WSBEiJ_G0036457.1 mouse_genomes_project 13 12909141 12909248 - Gm22628 snRNA snRNA MGP_WSBEiJ_T0035809.1 MGP_WSBEiJ_G0019756.1 mouse_genomes_project 13 29546701 30092927 - MGP_WSBEiJ_P0035809 Gmds protein_coding protein_coding MGP_WSBEiJ_T0035810.1 MGP_WSBEiJ_G0019756.1 mouse_genomes_project 13 29833199 30092800 - Gmds protein_coding retained_intron MGP_WSBEiJ_T0035811.1 MGP_WSBEiJ_G0019756.1 mouse_genomes_project 13 29897161 29974612 - Gmds protein_coding processed_transcript MGP_WSBEiJ_T0035812.1 MGP_WSBEiJ_G0019756.1 mouse_genomes_project 13 29972601 30092839 - MGP_WSBEiJ_P0035812 Gmds protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099052.1 MGP_WSBEiJ_G0037715.1 mouse_genomes_project 13 50343511 50343716 + Gm22806 snoRNA snoRNA MGP_WSBEiJ_T0097795.1 MGP_WSBEiJ_G0036458.1 mouse_genomes_project 13 14109737 14109844 + Gm25020 snRNA snRNA MGP_WSBEiJ_T0036899.1 MGP_WSBEiJ_G0020130.1 mouse_genomes_project 13 92302488 92326841 - MGP_WSBEiJ_P0036899 Ckmt2 protein_coding protein_coding MGP_WSBEiJ_T0012607.1 MGP_WSBEiJ_G0010737.1 mouse_genomes_project 13 21504255 21504854 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006460.1 MGP_WSBEiJ_G0005362.1 mouse_genomes_project 13 42695310 42750956 - Gm27007 lincRNA lincRNA MGP_WSBEiJ_T0036031.1 MGP_WSBEiJ_G0019842.1 mouse_genomes_project 13 45168942 45355998 - MGP_WSBEiJ_P0036031 Kif13a protein_coding protein_coding MGP_WSBEiJ_T0036032.1 MGP_WSBEiJ_G0019842.1 mouse_genomes_project 13 45168943 45355859 - MGP_WSBEiJ_P0036032 Kif13a protein_coding unknown_likely_coding MGP_WSBEiJ_T0036637.1 MGP_WSBEiJ_G0020052.1 mouse_genomes_project 13 68330031 68731997 - MGP_WSBEiJ_P0036637 Adcy2 protein_coding protein_coding MGP_WSBEiJ_T0036880.1 MGP_WSBEiJ_G0020125.1 mouse_genomes_project 13 91334011 91335831 + MGP_WSBEiJ_P0036880 Rps23 protein_coding protein_coding MGP_WSBEiJ_T0036491.1 MGP_WSBEiJ_G0019989.1 mouse_genomes_project 13 62262616 62267601 - MGP_WSBEiJ_P0036491 Gm5141 protein_coding protein_coding MGP_WSBEiJ_T0036102.1 MGP_WSBEiJ_G0019867.1 mouse_genomes_project 13 48255707 48281330 + MGP_WSBEiJ_P0036102 Nol8 protein_coding protein_coding MGP_WSBEiJ_T0011163.1 MGP_WSBEiJ_G0009320.1 mouse_genomes_project 13 104412614 104412895 - Gm24441 misc_RNA misc_RNA MGP_WSBEiJ_T0012617.1 MGP_WSBEiJ_G0010747.1 mouse_genomes_project 13 24182169 24182591 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012629.1 MGP_WSBEiJ_G0010759.1 mouse_genomes_project 13 30927754 30928561 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035863.1 MGP_WSBEiJ_G0019776.1 mouse_genomes_project 13 32093052 32260436 - MGP_WSBEiJ_P0035863 Slc22a23 protein_coding protein_coding MGP_WSBEiJ_T0035864.1 MGP_WSBEiJ_G0019776.1 mouse_genomes_project 13 32096762 32107426 - Slc22a23 protein_coding retained_intron MGP_WSBEiJ_T0035865.1 MGP_WSBEiJ_G0019776.1 mouse_genomes_project 13 32119001 32260234 - MGP_WSBEiJ_P0035865 Slc22a23 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035866.1 MGP_WSBEiJ_G0019776.1 mouse_genomes_project 13 32136079 32259842 - Slc22a23 protein_coding processed_transcript MGP_WSBEiJ_T0036182.1 MGP_WSBEiJ_G0019891.1 mouse_genomes_project 13 53057690 53089322 + MGP_WSBEiJ_P0036182 Hrh2 protein_coding protein_coding MGP_WSBEiJ_T0037204.1 MGP_WSBEiJ_G0020231.1 mouse_genomes_project 13 106171041 106318602 - MGP_WSBEiJ_P0037204 Rnf180 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037205.1 MGP_WSBEiJ_G0020231.1 mouse_genomes_project 13 106190809 106318602 - MGP_WSBEiJ_P0037205 Rnf180 protein_coding protein_coding MGP_WSBEiJ_T0012608.1 MGP_WSBEiJ_G0010738.1 mouse_genomes_project 13 21607489 21607901 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037136.1 MGP_WSBEiJ_G0020213.1 mouse_genomes_project 13 101707046 101738763 - MGP_WSBEiJ_P0037136 Slc30a5 protein_coding protein_coding MGP_WSBEiJ_T0036019.1 MGP_WSBEiJ_G0019837.1 mouse_genomes_project 13 44687209 44714777 + MGP_WSBEiJ_P0036019 Stmnd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0006535.1 MGP_WSBEiJ_G0005413.1 mouse_genomes_project 13 108837111 108841877 + 1700006H21Rik lincRNA lincRNA MGP_WSBEiJ_T0006536.1 MGP_WSBEiJ_G0005413.1 mouse_genomes_project 13 108837111 108841888 + 1700006H21Rik lincRNA lincRNA MGP_WSBEiJ_T0003361.1 MGP_WSBEiJ_G0003089.1 mouse_genomes_project 13 19059003 19065650 - Gm11280 antisense antisense MGP_WSBEiJ_T0000856.1 MGP_WSBEiJ_G0000794.1 mouse_genomes_project 13 70878022 70881262 - TEC TEC MGP_WSBEiJ_T0037166.1 MGP_WSBEiJ_G0020218.1 mouse_genomes_project 13 104816478 104924587 - MGP_WSBEiJ_P0037166 Erbin protein_coding protein_coding MGP_WSBEiJ_T0037167.1 MGP_WSBEiJ_G0020218.1 mouse_genomes_project 13 104816482 104893549 - MGP_WSBEiJ_P0037167 Erbin protein_coding protein_coding MGP_WSBEiJ_T0037168.1 MGP_WSBEiJ_G0020218.1 mouse_genomes_project 13 104816482 104924368 - MGP_WSBEiJ_P0037168 Erbin protein_coding protein_coding MGP_WSBEiJ_T0037169.1 MGP_WSBEiJ_G0020218.1 mouse_genomes_project 13 104817298 104924368 - MGP_WSBEiJ_P0037169 Erbin protein_coding protein_coding MGP_WSBEiJ_T0037170.1 MGP_WSBEiJ_G0020218.1 mouse_genomes_project 13 104817298 104924368 - MGP_WSBEiJ_P0037170 Erbin protein_coding protein_coding MGP_WSBEiJ_T0037171.1 MGP_WSBEiJ_G0020218.1 mouse_genomes_project 13 104817298 104924368 - MGP_WSBEiJ_P0037171 Erbin protein_coding protein_coding MGP_WSBEiJ_T0037172.1 MGP_WSBEiJ_G0020218.1 mouse_genomes_project 13 104841940 104924587 - Erbin protein_coding retained_intron MGP_WSBEiJ_T0035813.1 MGP_WSBEiJ_G0019757.1 mouse_genomes_project 13 30485762 30570135 - MGP_WSBEiJ_P0035813 Mylk4 protein_coding protein_coding MGP_WSBEiJ_T0035814.1 MGP_WSBEiJ_G0019757.1 mouse_genomes_project 13 30489597 30570072 - MGP_WSBEiJ_P0035814 Mylk4 protein_coding protein_coding MGP_WSBEiJ_T0035815.1 MGP_WSBEiJ_G0019757.1 mouse_genomes_project 13 30489826 30524787 - MGP_WSBEiJ_P0035815 Mylk4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035816.1 MGP_WSBEiJ_G0019757.1 mouse_genomes_project 13 30554865 30572318 - Mylk4 protein_coding processed_transcript MGP_WSBEiJ_T0037342.1 MGP_WSBEiJ_G0020277.1 mouse_genomes_project 13 117877766 117889066 - MGP_WSBEiJ_P0037342 Isl1 protein_coding protein_coding MGP_WSBEiJ_T0037343.1 MGP_WSBEiJ_G0020277.1 mouse_genomes_project 13 117878749 117888799 - MGP_WSBEiJ_P0037343 Isl1 protein_coding protein_coding MGP_WSBEiJ_T0037344.1 MGP_WSBEiJ_G0020277.1 mouse_genomes_project 13 117878881 117882823 - Isl1 protein_coding retained_intron MGP_WSBEiJ_T0037345.1 MGP_WSBEiJ_G0020277.1 mouse_genomes_project 13 117882517 117885802 - Isl1 protein_coding processed_transcript MGP_WSBEiJ_T0037346.1 MGP_WSBEiJ_G0020277.1 mouse_genomes_project 13 117886289 117889062 - Isl1 protein_coding retained_intron MGP_WSBEiJ_T0003358.1 MGP_WSBEiJ_G0003086.1 mouse_genomes_project 13 12314225 12315535 - Gm26645 antisense antisense MGP_WSBEiJ_T0037032.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97771928 97791237 + MGP_WSBEiJ_P0037032 Gfm2 protein_coding protein_coding MGP_WSBEiJ_T0037033.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97771928 97814324 + MGP_WSBEiJ_P0037033 Gfm2 protein_coding protein_coding MGP_WSBEiJ_T0037034.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97771968 97812514 + Gfm2 protein_coding retained_intron MGP_WSBEiJ_T0037035.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97771969 97814334 + MGP_WSBEiJ_P0037035 Gfm2 protein_coding protein_coding MGP_WSBEiJ_T0037036.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97771976 97806470 + MGP_WSBEiJ_P0037036 Gfm2 protein_coding protein_coding MGP_WSBEiJ_T0037037.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97771989 97778427 + Gfm2 protein_coding retained_intron MGP_WSBEiJ_T0037038.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97771993 97819085 + MGP_WSBEiJ_P0037038 Gfm2 protein_coding protein_coding MGP_WSBEiJ_T0037039.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97771999 97782051 + MGP_WSBEiJ_P0037039 Gfm2 protein_coding protein_coding MGP_WSBEiJ_T0037040.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97772031 97814334 + MGP_WSBEiJ_P0037040 Gfm2 protein_coding protein_coding MGP_WSBEiJ_T0037041.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97786110 97799095 + MGP_WSBEiJ_P0037041 Gfm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037042.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97795615 97814334 + Gfm2 protein_coding retained_intron MGP_WSBEiJ_T0037043.1 MGP_WSBEiJ_G0020177.1 mouse_genomes_project 13 97809333 97815364 + Gfm2 protein_coding retained_intron MGP_WSBEiJ_T0037047.1 MGP_WSBEiJ_G0020181.1 mouse_genomes_project 13 98973056 98989203 - MGP_WSBEiJ_P0037047 Utp15 protein_coding protein_coding MGP_WSBEiJ_T0035547.1 MGP_WSBEiJ_G0019612.1 mouse_genomes_project 13 18416340 18423337 + MGP_WSBEiJ_P0035547 Zscan12 protein_coding protein_coding MGP_WSBEiJ_T0035548.1 MGP_WSBEiJ_G0019612.1 mouse_genomes_project 13 18416801 18423337 + MGP_WSBEiJ_P0035548 Zscan12 protein_coding protein_coding MGP_WSBEiJ_T0035623.1 MGP_WSBEiJ_G0019662.1 mouse_genomes_project 13 20001979 20002900 - MGP_WSBEiJ_P0035623 Vmn1r210 protein_coding protein_coding MGP_WSBEiJ_T0011159.1 MGP_WSBEiJ_G0009316.1 mouse_genomes_project 13 55745090 55745260 + Gm27271 misc_RNA misc_RNA MGP_WSBEiJ_T0036373.1 MGP_WSBEiJ_G0019948.1 mouse_genomes_project 13 55742578 55778904 + MGP_WSBEiJ_P0036373 Smad5 protein_coding protein_coding MGP_WSBEiJ_T0036374.1 MGP_WSBEiJ_G0019948.1 mouse_genomes_project 13 55742607 55767863 + Smad5 protein_coding processed_transcript MGP_WSBEiJ_T0036375.1 MGP_WSBEiJ_G0019948.1 mouse_genomes_project 13 55742620 55776487 + MGP_WSBEiJ_P0036375 Smad5 protein_coding protein_coding MGP_WSBEiJ_T0036376.1 MGP_WSBEiJ_G0019948.1 mouse_genomes_project 13 55742634 55767774 + Smad5 protein_coding processed_transcript MGP_WSBEiJ_T0036377.1 MGP_WSBEiJ_G0019948.1 mouse_genomes_project 13 55744730 55776831 + MGP_WSBEiJ_P0036377 Smad5 protein_coding protein_coding MGP_WSBEiJ_T0036378.1 MGP_WSBEiJ_G0019948.1 mouse_genomes_project 13 55767665 55775520 + Smad5 protein_coding processed_transcript MGP_WSBEiJ_T0099038.1 MGP_WSBEiJ_G0037701.1 mouse_genomes_project 13 15865654 15865788 + Gm26172 snoRNA snoRNA MGP_WSBEiJ_T0036310.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54429144 54445212 - MGP_WSBEiJ_P0036310 Dbn1 protein_coding protein_coding MGP_WSBEiJ_T0036311.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54429144 54445212 - MGP_WSBEiJ_P0036311 Dbn1 protein_coding protein_coding MGP_WSBEiJ_T0036312.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54429658 54445162 - MGP_WSBEiJ_P0036312 Dbn1 protein_coding protein_coding MGP_WSBEiJ_T0036313.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54430839 54445167 - Dbn1 protein_coding retained_intron MGP_WSBEiJ_T0036314.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54437078 54439242 - Dbn1 protein_coding retained_intron MGP_WSBEiJ_T0036315.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54437100 54439355 - Dbn1 protein_coding retained_intron MGP_WSBEiJ_T0036316.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54438647 54444740 - MGP_WSBEiJ_P0036316 Dbn1 protein_coding protein_coding MGP_WSBEiJ_T0036317.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54438764 54443767 - Dbn1 protein_coding processed_transcript MGP_WSBEiJ_T0036318.1 MGP_WSBEiJ_G0019924.1 mouse_genomes_project 13 54439377 54441066 - Dbn1 protein_coding retained_intron MGP_WSBEiJ_T0099053.1 MGP_WSBEiJ_G0037716.1 mouse_genomes_project 13 55170641 55170764 + Gm25148 snoRNA snoRNA MGP_WSBEiJ_T0011156.1 MGP_WSBEiJ_G0009313.1 mouse_genomes_project 13 55739511 55739760 + Gm27698 misc_RNA misc_RNA MGP_WSBEiJ_T0035730.1 MGP_WSBEiJ_G0019714.1 mouse_genomes_project 13 22342890 22362685 - MGP_WSBEiJ_P0035730 Mrs2 protein_coding protein_coding MGP_WSBEiJ_T0097796.1 MGP_WSBEiJ_G0036459.1 mouse_genomes_project 13 14720651 14720758 - Gm24018 snRNA snRNA MGP_WSBEiJ_T0036523.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63328854 63368343 + MGP_WSBEiJ_P0036523 Ercc6l2 protein_coding protein_coding MGP_WSBEiJ_T0036524.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63328916 63392837 + MGP_WSBEiJ_P0036524 Ercc6l2 protein_coding protein_coding MGP_WSBEiJ_T0036525.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63328948 63351758 + Ercc6l2 protein_coding processed_transcript MGP_WSBEiJ_T0036526.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63328948 63389859 + MGP_WSBEiJ_P0036526 Ercc6l2 protein_coding protein_coding MGP_WSBEiJ_T0036527.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63328948 63368308 + MGP_WSBEiJ_P0036527 Ercc6l2 protein_coding protein_coding MGP_WSBEiJ_T0036528.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63335184 63389504 + MGP_WSBEiJ_P0036528 Ercc6l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036529.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63335186 63389880 + MGP_WSBEiJ_P0036529 Ercc6l2 protein_coding protein_coding MGP_WSBEiJ_T0036530.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63335186 63374250 + MGP_WSBEiJ_P0036530 Ercc6l2 protein_coding protein_coding MGP_WSBEiJ_T0036531.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63335509 63356425 + MGP_WSBEiJ_P0036531 Ercc6l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036532.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63390734 63392744 + Ercc6l2 protein_coding processed_transcript MGP_WSBEiJ_T0036533.1 MGP_WSBEiJ_G0019995.1 mouse_genomes_project 13 63392701 63421388 + MGP_WSBEiJ_P0036533 Ercc6l2 protein_coding protein_coding MGP_WSBEiJ_T0000842.1 MGP_WSBEiJ_G0000781.1 mouse_genomes_project 13 14918373 14925788 + TEC TEC MGP_WSBEiJ_T0003396.1 MGP_WSBEiJ_G0003113.1 mouse_genomes_project 13 66929346 66940195 + antisense antisense MGP_WSBEiJ_T0003435.1 MGP_WSBEiJ_G0003134.1 mouse_genomes_project 13 107943904 107945801 + Gm28988 antisense antisense MGP_WSBEiJ_T0037347.1 MGP_WSBEiJ_G0020278.1 mouse_genomes_project 13 118450980 118627139 - MGP_WSBEiJ_P0037347 Parp8 protein_coding protein_coding MGP_WSBEiJ_T0036020.1 MGP_WSBEiJ_G0019838.1 mouse_genomes_project 13 44827963 44841473 + MGP_WSBEiJ_P0036020 Rbm24 protein_coding protein_coding MGP_WSBEiJ_T0036516.1 MGP_WSBEiJ_G0019994.1 mouse_genomes_project 13 63003015 63061785 - MGP_WSBEiJ_P0036516 Ptch1 protein_coding protein_coding MGP_WSBEiJ_T0036517.1 MGP_WSBEiJ_G0019994.1 mouse_genomes_project 13 63003016 63069448 - MGP_WSBEiJ_P0036517 Ptch1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036518.1 MGP_WSBEiJ_G0019994.1 mouse_genomes_project 13 63008457 63009188 - Ptch1 protein_coding retained_intron MGP_WSBEiJ_T0036519.1 MGP_WSBEiJ_G0019994.1 mouse_genomes_project 13 63012762 63059806 - MGP_WSBEiJ_P0036519 Ptch1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036520.1 MGP_WSBEiJ_G0019994.1 mouse_genomes_project 13 63039142 63061265 - MGP_WSBEiJ_P0036520 Ptch1 protein_coding protein_coding MGP_WSBEiJ_T0036521.1 MGP_WSBEiJ_G0019994.1 mouse_genomes_project 13 63039142 63060317 - MGP_WSBEiJ_P0036521 Ptch1 protein_coding protein_coding MGP_WSBEiJ_T0036522.1 MGP_WSBEiJ_G0019994.1 mouse_genomes_project 13 63039142 63069586 - MGP_WSBEiJ_P0036522 Ptch1 protein_coding protein_coding MGP_WSBEiJ_T0036417.1 MGP_WSBEiJ_G0019960.1 mouse_genomes_project 13 57735223 57748197 - MGP_WSBEiJ_P0036417 Slc28a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036418.1 MGP_WSBEiJ_G0019960.1 mouse_genomes_project 13 57743304 57803520 - MGP_WSBEiJ_P0036418 Slc28a3 protein_coding protein_coding MGP_WSBEiJ_T0036419.1 MGP_WSBEiJ_G0019960.1 mouse_genomes_project 13 57775269 57803520 - MGP_WSBEiJ_P0036419 Slc28a3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036420.1 MGP_WSBEiJ_G0019960.1 mouse_genomes_project 13 57778593 57803512 - Slc28a3 protein_coding retained_intron MGP_WSBEiJ_T0006421.1 MGP_WSBEiJ_G0005333.1 mouse_genomes_project 13 21656565 21657638 - Gm11342 lincRNA lincRNA MGP_WSBEiJ_T0035571.1 MGP_WSBEiJ_G0019622.1 mouse_genomes_project 13 18618024 18618968 - MGP_WSBEiJ_P0035571 Olfr1535 protein_coding protein_coding MGP_WSBEiJ_T0003430.1 MGP_WSBEiJ_G0003130.1 mouse_genomes_project 13 103729979 103731628 + 1700099I09Rik antisense antisense MGP_WSBEiJ_T0003431.1 MGP_WSBEiJ_G0003130.1 mouse_genomes_project 13 103729994 103731594 + 1700099I09Rik antisense antisense MGP_WSBEiJ_T0037302.1 MGP_WSBEiJ_G0020255.1 mouse_genomes_project 13 114027683 114108645 + MGP_WSBEiJ_P0037302 Slc38a9 protein_coding protein_coding MGP_WSBEiJ_T0036584.1 MGP_WSBEiJ_G0020021.1 mouse_genomes_project 13 66618247 66646554 - protein_coding processed_transcript MGP_WSBEiJ_T0036585.1 MGP_WSBEiJ_G0020021.1 mouse_genomes_project 13 66618247 66657171 - MGP_WSBEiJ_P0036585 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036586.1 MGP_WSBEiJ_G0020021.1 mouse_genomes_project 13 66618248 66646639 - MGP_WSBEiJ_P0036586 protein_coding protein_coding MGP_WSBEiJ_T0036588.1 MGP_WSBEiJ_G0020021.1 mouse_genomes_project 13 66622792 66646639 - protein_coding processed_transcript MGP_WSBEiJ_T0036590.1 MGP_WSBEiJ_G0020021.1 mouse_genomes_project 13 66654030 66657226 - protein_coding processed_transcript MGP_WSBEiJ_T0035563.1 MGP_WSBEiJ_G0019617.1 mouse_genomes_project 13 18537494 18538311 - MGP_WSBEiJ_P0035563 Gm10065 protein_coding protein_coding MGP_WSBEiJ_T0003412.1 MGP_WSBEiJ_G0003121.1 mouse_genomes_project 13 84401342 84403936 - A230107N01Rik antisense antisense MGP_WSBEiJ_T0003413.1 MGP_WSBEiJ_G0003121.1 mouse_genomes_project 13 84402370 84403861 - A230107N01Rik antisense antisense MGP_WSBEiJ_T0035768.1 MGP_WSBEiJ_G0019735.1 mouse_genomes_project 13 25171277 25179509 - MGP_WSBEiJ_P0035768 Prl7d1 protein_coding protein_coding MGP_WSBEiJ_T0035769.1 MGP_WSBEiJ_G0019735.1 mouse_genomes_project 13 25179178 25179497 - Prl7d1 protein_coding processed_transcript MGP_WSBEiJ_T0035902.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35783990 35910669 + MGP_WSBEiJ_P0035902 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035903.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35840473 35910646 + MGP_WSBEiJ_P0035903 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035904.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35840537 35952775 + MGP_WSBEiJ_P0035904 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035905.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35840813 35969185 + MGP_WSBEiJ_P0035905 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035906.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35841430 35949913 + MGP_WSBEiJ_P0035906 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035907.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35841430 35964206 + MGP_WSBEiJ_P0035907 Rreb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035908.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35841891 35949915 + MGP_WSBEiJ_P0035908 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035909.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35873739 35910734 + MGP_WSBEiJ_P0035909 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035910.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35904029 35969187 + MGP_WSBEiJ_P0035910 Rreb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035911.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35904466 35969179 + MGP_WSBEiJ_P0035911 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035912.1 MGP_WSBEiJ_G0019792.1 mouse_genomes_project 13 35964197 35966387 + MGP_WSBEiJ_P0035912 Rreb1 protein_coding protein_coding MGP_WSBEiJ_T0035620.1 MGP_WSBEiJ_G0019659.1 mouse_genomes_project 13 19644716 19645625 - MGP_WSBEiJ_P0035620 Vmn1r202 protein_coding protein_coding MGP_WSBEiJ_T0099040.1 MGP_WSBEiJ_G0037703.1 mouse_genomes_project 13 21634851 21634974 - Gm23340 snoRNA snoRNA MGP_WSBEiJ_T0012641.1 MGP_WSBEiJ_G0010771.1 mouse_genomes_project 13 63468579 63469172 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036561.1 MGP_WSBEiJ_G0020013.1 mouse_genomes_project 13 64790781 64795674 + MGP_WSBEiJ_P0036561 Gm10775 protein_coding protein_coding MGP_WSBEiJ_T0012614.1 MGP_WSBEiJ_G0010744.1 mouse_genomes_project 13 22937464 22939342 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0036098.1 MGP_WSBEiJ_G0019864.1 mouse_genomes_project 13 48142417 48167386 + MGP_WSBEiJ_P0036098 Aspn protein_coding protein_coding MGP_WSBEiJ_T0036099.1 MGP_WSBEiJ_G0019864.1 mouse_genomes_project 13 48142417 48167386 + MGP_WSBEiJ_P0036099 Aspn protein_coding protein_coding MGP_WSBEiJ_T0037129.1 MGP_WSBEiJ_G0020212.1 mouse_genomes_project 13 101680267 101688631 - MGP_WSBEiJ_P0037129 Ccnb1 protein_coding protein_coding MGP_WSBEiJ_T0037130.1 MGP_WSBEiJ_G0020212.1 mouse_genomes_project 13 101680349 101688547 - MGP_WSBEiJ_P0037130 Ccnb1 protein_coding protein_coding MGP_WSBEiJ_T0037131.1 MGP_WSBEiJ_G0020212.1 mouse_genomes_project 13 101680364 101683513 - Ccnb1 protein_coding retained_intron MGP_WSBEiJ_T0037132.1 MGP_WSBEiJ_G0020212.1 mouse_genomes_project 13 101681709 101684093 - Ccnb1 protein_coding retained_intron MGP_WSBEiJ_T0037133.1 MGP_WSBEiJ_G0020212.1 mouse_genomes_project 13 101681759 101688463 - MGP_WSBEiJ_P0037133 Ccnb1 protein_coding protein_coding MGP_WSBEiJ_T0037134.1 MGP_WSBEiJ_G0020212.1 mouse_genomes_project 13 101685103 101687664 - Ccnb1 protein_coding retained_intron MGP_WSBEiJ_T0037135.1 MGP_WSBEiJ_G0020212.1 mouse_genomes_project 13 101687597 101688536 - Ccnb1 protein_coding retained_intron MGP_WSBEiJ_T0036096.1 MGP_WSBEiJ_G0019862.1 mouse_genomes_project 13 48055862 48255104 - MGP_WSBEiJ_P0036096 Cenpp protein_coding protein_coding MGP_WSBEiJ_T0035338.1 MGP_WSBEiJ_G0019543.1 mouse_genomes_project 13 548302 590521 + MGP_WSBEiJ_P0035338 Akr1c14 protein_coding protein_coding MGP_WSBEiJ_T0035339.1 MGP_WSBEiJ_G0019543.1 mouse_genomes_project 13 560173 590512 + MGP_WSBEiJ_P0035339 Akr1c14 protein_coding protein_coding MGP_WSBEiJ_T0035340.1 MGP_WSBEiJ_G0019543.1 mouse_genomes_project 13 572358 589060 + Akr1c14 protein_coding processed_transcript MGP_WSBEiJ_T0035991.1 MGP_WSBEiJ_G0019829.1 mouse_genomes_project 13 42061162 42079233 + MGP_WSBEiJ_P0035991 Cd83 protein_coding protein_coding MGP_WSBEiJ_T0035455.1 MGP_WSBEiJ_G0019575.1 mouse_genomes_project 13 9930504 9940626 + MGP_WSBEiJ_P0035455 protein_coding protein_coding MGP_WSBEiJ_T0012667.1 MGP_WSBEiJ_G0010797.1 mouse_genomes_project 13 88792427 88792866 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100560.1 MGP_WSBEiJ_G0039018.1 mouse_genomes_project 13 31587941 31588731 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006461.1 MGP_WSBEiJ_G0005363.1 mouse_genomes_project 13 42734563 42753219 + 1700029N11Rik lincRNA lincRNA MGP_WSBEiJ_T0006462.1 MGP_WSBEiJ_G0005363.1 mouse_genomes_project 13 42734578 42753222 + 1700029N11Rik lincRNA lincRNA MGP_WSBEiJ_T0096951.1 MGP_WSBEiJ_G0035632.1 mouse_genomes_project 13 104394776 104394881 + n-R5s56 rRNA rRNA MGP_WSBEiJ_T0036790.1 MGP_WSBEiJ_G0020109.1 mouse_genomes_project 13 81771993 81810763 - MGP_WSBEiJ_P0036790 Polr3g protein_coding protein_coding MGP_WSBEiJ_T0036791.1 MGP_WSBEiJ_G0020109.1 mouse_genomes_project 13 81772030 81786333 - Polr3g protein_coding retained_intron MGP_WSBEiJ_T0036792.1 MGP_WSBEiJ_G0020109.1 mouse_genomes_project 13 81792880 81810706 - MGP_WSBEiJ_P0036792 Polr3g protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036793.1 MGP_WSBEiJ_G0020109.1 mouse_genomes_project 13 81793317 81810695 - MGP_WSBEiJ_P0036793 Polr3g protein_coding protein_coding MGP_WSBEiJ_T0036794.1 MGP_WSBEiJ_G0020109.1 mouse_genomes_project 13 81799130 81810752 - Polr3g protein_coding retained_intron MGP_WSBEiJ_T0037207.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107877851 108037135 - MGP_WSBEiJ_P0037207 Ipo11 protein_coding protein_coding MGP_WSBEiJ_T0037208.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107877851 108024291 - MGP_WSBEiJ_P0037208 Ipo11 protein_coding protein_coding MGP_WSBEiJ_T0037209.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107877859 107939431 - MGP_WSBEiJ_P0037209 Ipo11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037210.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107897252 107950034 - Ipo11 protein_coding retained_intron MGP_WSBEiJ_T0037211.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107897357 107927803 - Ipo11 protein_coding retained_intron MGP_WSBEiJ_T0037212.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107925195 107939266 - Ipo11 protein_coding processed_transcript MGP_WSBEiJ_T0037213.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107925197 107927791 - Ipo11 protein_coding processed_transcript MGP_WSBEiJ_T0037214.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107934087 107940467 - Ipo11 protein_coding retained_intron MGP_WSBEiJ_T0037215.1 MGP_WSBEiJ_G0020233.1 mouse_genomes_project 13 107952641 108037122 - Ipo11 protein_coding retained_intron MGP_WSBEiJ_T0012603.1 MGP_WSBEiJ_G0010733.1 mouse_genomes_project 13 20321734 20322198 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012655.1 MGP_WSBEiJ_G0010785.1 mouse_genomes_project 13 73971201 73972543 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035826.1 MGP_WSBEiJ_G0019763.1 mouse_genomes_project 13 30807772 30822492 + MGP_WSBEiJ_P0035826 Serpinb9 protein_coding protein_coding MGP_WSBEiJ_T0035827.1 MGP_WSBEiJ_G0019763.1 mouse_genomes_project 13 30809066 30822490 + MGP_WSBEiJ_P0035827 Serpinb9 protein_coding protein_coding MGP_WSBEiJ_T0035829.1 MGP_WSBEiJ_G0019765.1 mouse_genomes_project 13 30891611 30901158 + MGP_WSBEiJ_P0035829 Serpinb1b protein_coding protein_coding MGP_WSBEiJ_T0012666.1 MGP_WSBEiJ_G0010796.1 mouse_genomes_project 13 88467576 88468372 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037379.1 MGP_WSBEiJ_G0020295.1 mouse_genomes_project 13 121520428 121546002 - MGP_WSBEiJ_P0037379 Zfp131 protein_coding protein_coding MGP_WSBEiJ_T0037380.1 MGP_WSBEiJ_G0020295.1 mouse_genomes_project 13 121521594 121546125 - MGP_WSBEiJ_P0037380 Zfp131 protein_coding unknown_likely_coding MGP_WSBEiJ_T0037228.1 MGP_WSBEiJ_G0020239.1 mouse_genomes_project 13 109216159 109327284 - MGP_WSBEiJ_P0037228 Ndufaf2 protein_coding protein_coding MGP_WSBEiJ_T0036737.1 MGP_WSBEiJ_G0020095.1 mouse_genomes_project 13 75980905 76012444 + MGP_WSBEiJ_P0036737 Spata9 protein_coding protein_coding MGP_WSBEiJ_T0035382.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5350054 5413152 - MGP_WSBEiJ_P0035382 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035383.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5350081 5412465 - MGP_WSBEiJ_P0035383 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035384.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5352820 5388622 - MGP_WSBEiJ_P0035384 Wdr37 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035385.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5359480 5390544 - MGP_WSBEiJ_P0035385 Wdr37 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035386.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5359538 5394681 - MGP_WSBEiJ_P0035386 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035387.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5374982 5376829 - Wdr37 protein_coding retained_intron MGP_WSBEiJ_T0035388.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5382358 5399147 - MGP_WSBEiJ_P0035388 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035389.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5388664 5413158 - MGP_WSBEiJ_P0035389 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035390.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5390528 5401663 - MGP_WSBEiJ_P0035390 Wdr37 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035391.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5391470 5412444 - MGP_WSBEiJ_P0035391 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035392.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5393638 5412400 - MGP_WSBEiJ_P0035392 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035393.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5393641 5401660 - MGP_WSBEiJ_P0035393 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035394.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5394298 5412415 - Wdr37 protein_coding processed_transcript MGP_WSBEiJ_T0035395.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5394646 5399160 - Wdr37 protein_coding processed_transcript MGP_WSBEiJ_T0035396.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5397929 5413331 - MGP_WSBEiJ_P0035396 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0035397.1 MGP_WSBEiJ_G0019559.1 mouse_genomes_project 13 5401573 5412428 - MGP_WSBEiJ_P0035397 Wdr37 protein_coding protein_coding MGP_WSBEiJ_T0036605.1 MGP_WSBEiJ_G0020033.1 mouse_genomes_project 13 66882593 66929212 - MGP_WSBEiJ_P0036605 Gm28044 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036606.1 MGP_WSBEiJ_G0020033.1 mouse_genomes_project 13 66885455 66915378 - Gm28044 protein_coding processed_transcript MGP_WSBEiJ_T0037276.1 MGP_WSBEiJ_G0020249.1 mouse_genomes_project 13 113009147 113033915 + MGP_WSBEiJ_P0037276 Mier3 protein_coding protein_coding MGP_WSBEiJ_T0037277.1 MGP_WSBEiJ_G0020249.1 mouse_genomes_project 13 113009196 113014677 + Mier3 protein_coding retained_intron MGP_WSBEiJ_T0037278.1 MGP_WSBEiJ_G0020249.1 mouse_genomes_project 13 113009197 113034872 + MGP_WSBEiJ_P0037278 Mier3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037279.1 MGP_WSBEiJ_G0020249.1 mouse_genomes_project 13 113009217 113034881 + MGP_WSBEiJ_P0037279 Mier3 protein_coding protein_coding MGP_WSBEiJ_T0035331.1 MGP_WSBEiJ_G0019538.1 mouse_genomes_project 13 329570 330426 + MGP_WSBEiJ_P0035331 Calm4 protein_coding protein_coding MGP_WSBEiJ_T0006419.1 MGP_WSBEiJ_G0005332.1 mouse_genomes_project 13 20683511 20686560 - C230035I16Rik lincRNA lincRNA MGP_WSBEiJ_T0006420.1 MGP_WSBEiJ_G0005332.1 mouse_genomes_project 13 20683643 20686364 - C230035I16Rik lincRNA lincRNA MGP_WSBEiJ_T0099049.1 MGP_WSBEiJ_G0037712.1 mouse_genomes_project 13 47111656 47111788 - Gm25232 snoRNA snoRNA MGP_WSBEiJ_T0100549.1 MGP_WSBEiJ_G0039007.1 mouse_genomes_project 13 21645314 21646377 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036393.1 MGP_WSBEiJ_G0019951.1 mouse_genomes_project 13 57124308 57241618 - MGP_WSBEiJ_P0036393 Klhl3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036394.1 MGP_WSBEiJ_G0019951.1 mouse_genomes_project 13 57128148 57242055 - MGP_WSBEiJ_P0036394 Klhl3 protein_coding protein_coding MGP_WSBEiJ_T0036395.1 MGP_WSBEiJ_G0019951.1 mouse_genomes_project 13 57128889 57230895 - MGP_WSBEiJ_P0036395 Klhl3 protein_coding protein_coding MGP_WSBEiJ_T0035343.1 MGP_WSBEiJ_G0019545.1 mouse_genomes_project 13 693079 707835 + MGP_WSBEiJ_P0035343 Akr1c13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036010.1 MGP_WSBEiJ_G0019832.1 mouse_genomes_project 13 43400987 43404978 + MGP_WSBEiJ_P0036010 protein_coding protein_coding MGP_WSBEiJ_T0036206.1 MGP_WSBEiJ_G0019897.1 mouse_genomes_project 13 53470882 53476800 - MGP_WSBEiJ_P0036206 Nop16 protein_coding protein_coding MGP_WSBEiJ_T0036207.1 MGP_WSBEiJ_G0019897.1 mouse_genomes_project 13 53471233 53476768 - MGP_WSBEiJ_P0036207 Nop16 protein_coding protein_coding MGP_WSBEiJ_T0036208.1 MGP_WSBEiJ_G0019897.1 mouse_genomes_project 13 53471936 53476686 - MGP_WSBEiJ_P0036208 Nop16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036977.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95587356 95824238 - MGP_WSBEiJ_P0036977 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036978.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95587361 95597158 - MGP_WSBEiJ_P0036978 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036979.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95587407 95795921 - MGP_WSBEiJ_P0036979 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036980.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95588229 95609650 - Pde8b protein_coding processed_transcript MGP_WSBEiJ_T0036981.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95589001 95824068 - MGP_WSBEiJ_P0036981 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036982.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95589018 95795668 - MGP_WSBEiJ_P0036982 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036983.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95589018 95795668 - MGP_WSBEiJ_P0036983 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036984.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95589018 95795668 - MGP_WSBEiJ_P0036984 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036985.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95596850 95796410 - MGP_WSBEiJ_P0036985 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036986.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95606605 95824176 - MGP_WSBEiJ_P0036986 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036987.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95607051 95616533 - Pde8b protein_coding retained_intron MGP_WSBEiJ_T0036988.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95657105 95795921 - Pde8b protein_coding retained_intron MGP_WSBEiJ_T0036989.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95667946 95824217 - MGP_WSBEiJ_P0036989 Pde8b protein_coding protein_coding MGP_WSBEiJ_T0036990.1 MGP_WSBEiJ_G0020157.1 mouse_genomes_project 13 95670799 95757489 - Pde8b protein_coding processed_transcript MGP_WSBEiJ_T0099043.1 MGP_WSBEiJ_G0037706.1 mouse_genomes_project 13 29140925 29141050 + Gm23351 snoRNA snoRNA MGP_WSBEiJ_T0036608.1 MGP_WSBEiJ_G0020035.1 mouse_genomes_project 13 66913059 66953300 - MGP_WSBEiJ_P0036608 Gm28041 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035641.1 MGP_WSBEiJ_G0019674.1 mouse_genomes_project 13 20796243 20796716 + MGP_WSBEiJ_P0035641 Hist1h4h protein_coding protein_coding MGP_WSBEiJ_T0035332.1 MGP_WSBEiJ_G0019539.1 mouse_genomes_project 13 335846 353588 + MGP_WSBEiJ_P0035332 Calm5 protein_coding protein_coding MGP_WSBEiJ_T0035333.1 MGP_WSBEiJ_G0019539.1 mouse_genomes_project 13 352837 353597 + MGP_WSBEiJ_P0035333 Calm5 protein_coding protein_coding MGP_WSBEiJ_T0035646.1 MGP_WSBEiJ_G0019679.1 mouse_genomes_project 13 20851109 20852449 + MGP_WSBEiJ_P0035646 Hist1h2bg protein_coding protein_coding MGP_WSBEiJ_T0036626.1 MGP_WSBEiJ_G0020045.1 mouse_genomes_project 13 67455616 67465339 - MGP_WSBEiJ_P0036626 Gm9894 protein_coding protein_coding MGP_WSBEiJ_T0003359.1 MGP_WSBEiJ_G0003087.1 mouse_genomes_project 13 16093844 16127704 - Gm43385 antisense antisense MGP_WSBEiJ_T0036363.1 MGP_WSBEiJ_G0019941.1 mouse_genomes_project 13 55299111 55307018 - MGP_WSBEiJ_P0036363 Cxcl14 protein_coding protein_coding MGP_WSBEiJ_T0003437.1 MGP_WSBEiJ_G0003136.1 mouse_genomes_project 13 119336020 119350977 - 4933413L06Rik antisense antisense MGP_WSBEiJ_T0003438.1 MGP_WSBEiJ_G0003136.1 mouse_genomes_project 13 119336279 119350953 - 4933413L06Rik antisense antisense MGP_WSBEiJ_T0099056.1 MGP_WSBEiJ_G0037719.1 mouse_genomes_project 13 64676878 64677029 + Gm24130 snoRNA snoRNA MGP_WSBEiJ_T0036621.1 MGP_WSBEiJ_G0020042.1 mouse_genomes_project 13 67145865 67164368 - MGP_WSBEiJ_P0036621 Zfp748 protein_coding protein_coding MGP_WSBEiJ_T0036622.1 MGP_WSBEiJ_G0020042.1 mouse_genomes_project 13 67156135 67164368 - MGP_WSBEiJ_P0036622 Zfp748 protein_coding protein_coding MGP_WSBEiJ_T0037269.1 MGP_WSBEiJ_G0020247.1 mouse_genomes_project 13 112541854 112544591 + MGP_WSBEiJ_P0037269 Actbl2 protein_coding protein_coding MGP_WSBEiJ_T0012672.1 MGP_WSBEiJ_G0010802.1 mouse_genomes_project 13 101670629 101672411 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037053.1 MGP_WSBEiJ_G0020183.1 mouse_genomes_project 13 99005788 99033410 + MGP_WSBEiJ_P0037053 Gm21976 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0037054.1 MGP_WSBEiJ_G0020183.1 mouse_genomes_project 13 99005793 99020208 + MGP_WSBEiJ_P0037054 Gm21976 protein_coding protein_coding MGP_WSBEiJ_T0037055.1 MGP_WSBEiJ_G0020183.1 mouse_genomes_project 13 99005839 99033410 + MGP_WSBEiJ_P0037055 Gm21976 protein_coding protein_coding MGP_WSBEiJ_T0037056.1 MGP_WSBEiJ_G0020183.1 mouse_genomes_project 13 99028804 99033348 + MGP_WSBEiJ_P0037056 Gm21976 protein_coding protein_coding MGP_WSBEiJ_T0035672.1 MGP_WSBEiJ_G0019698.1 mouse_genomes_project 13 21141042 21163054 + MGP_WSBEiJ_P0035672 Slc17a3 protein_coding protein_coding MGP_WSBEiJ_T0035917.1 MGP_WSBEiJ_G0019796.1 mouse_genomes_project 13 36167414 36218922 + MGP_WSBEiJ_P0035917 Dsp protein_coding protein_coding MGP_WSBEiJ_T0035918.1 MGP_WSBEiJ_G0019796.1 mouse_genomes_project 13 36167434 36218922 + MGP_WSBEiJ_P0035918 Dsp protein_coding protein_coding MGP_WSBEiJ_T0035919.1 MGP_WSBEiJ_G0019796.1 mouse_genomes_project 13 36197074 36200940 + Dsp protein_coding processed_transcript MGP_WSBEiJ_T0037173.1 MGP_WSBEiJ_G0020219.1 mouse_genomes_project 13 105021748 105110268 - MGP_WSBEiJ_P0037173 Nln protein_coding protein_coding MGP_WSBEiJ_T0006527.1 MGP_WSBEiJ_G0005405.1 mouse_genomes_project 13 99210739 99211601 - Gm29501 lincRNA lincRNA MGP_WSBEiJ_T0037321.1 MGP_WSBEiJ_G0020267.1 mouse_genomes_project 13 114692042 114767429 + MGP_WSBEiJ_P0037321 BC067074 protein_coding protein_coding MGP_WSBEiJ_T0037322.1 MGP_WSBEiJ_G0020267.1 mouse_genomes_project 13 114737373 114768427 + MGP_WSBEiJ_P0037322 BC067074 protein_coding protein_coding MGP_WSBEiJ_T0037323.1 MGP_WSBEiJ_G0020267.1 mouse_genomes_project 13 114747195 114778266 + MGP_WSBEiJ_P0037323 BC067074 protein_coding protein_coding MGP_WSBEiJ_T0035718.1 MGP_WSBEiJ_G0019709.1 mouse_genomes_project 13 22155492 22171402 - MGP_WSBEiJ_P0035718 Acot13 protein_coding protein_coding MGP_WSBEiJ_T0035611.1 MGP_WSBEiJ_G0019650.1 mouse_genomes_project 13 19393597 19394488 + MGP_WSBEiJ_P0035611 Vmn1r194 protein_coding protein_coding MGP_WSBEiJ_T0011157.1 MGP_WSBEiJ_G0009314.1 mouse_genomes_project 13 55744703 55744830 + Gm27301 misc_RNA misc_RNA MGP_WSBEiJ_T0100551.1 MGP_WSBEiJ_G0039009.1 mouse_genomes_project 13 25146528 25160130 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006437.1 MGP_WSBEiJ_G0005345.1 mouse_genomes_project 13 29042452 29044643 - Gm11374 lincRNA lincRNA MGP_WSBEiJ_T0037116.1 MGP_WSBEiJ_G0020206.1 mouse_genomes_project 13 101535861 101553747 + MGP_WSBEiJ_P0037116 protein_coding protein_coding MGP_WSBEiJ_T0037117.1 MGP_WSBEiJ_G0020206.1 mouse_genomes_project 13 101536244 101540851 + protein_coding retained_intron MGP_WSBEiJ_T0037118.1 MGP_WSBEiJ_G0020206.1 mouse_genomes_project 13 101536508 101540929 + protein_coding retained_intron MGP_WSBEiJ_T0036671.1 MGP_WSBEiJ_G0020067.1 mouse_genomes_project 13 73382191 73432831 + MGP_WSBEiJ_P0036671 Lpcat1 protein_coding protein_coding MGP_WSBEiJ_T0036672.1 MGP_WSBEiJ_G0020067.1 mouse_genomes_project 13 73382191 73432831 + MGP_WSBEiJ_P0036672 Lpcat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036673.1 MGP_WSBEiJ_G0020067.1 mouse_genomes_project 13 73382225 73431521 + MGP_WSBEiJ_P0036673 Lpcat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036674.1 MGP_WSBEiJ_G0020067.1 mouse_genomes_project 13 73382417 73417156 + Lpcat1 protein_coding retained_intron MGP_WSBEiJ_T0036675.1 MGP_WSBEiJ_G0020067.1 mouse_genomes_project 13 73419294 73430250 + Lpcat1 protein_coding retained_intron MGP_WSBEiJ_T0036676.1 MGP_WSBEiJ_G0020067.1 mouse_genomes_project 13 73427359 73428017 + Lpcat1 protein_coding retained_intron MGP_WSBEiJ_T0036594.1 MGP_WSBEiJ_G0020026.1 mouse_genomes_project 13 66719857 66782014 + MGP_WSBEiJ_P0036594 protein_coding protein_coding MGP_WSBEiJ_T0036597.1 MGP_WSBEiJ_G0020029.1 mouse_genomes_project 13 66765059 66782148 + MGP_WSBEiJ_P0036597 protein_coding protein_coding MGP_WSBEiJ_T0035773.1 MGP_WSBEiJ_G0019739.1 mouse_genomes_project 13 25581291 25588633 + MGP_WSBEiJ_P0035773 Prl4a1 protein_coding protein_coding MGP_WSBEiJ_T0011146.1 MGP_WSBEiJ_G0009303.1 mouse_genomes_project 13 5662896 5663191 + Gm23553 misc_RNA misc_RNA MGP_WSBEiJ_T0036609.1 MGP_WSBEiJ_G0020036.1 mouse_genomes_project 13 66995348 67016707 - MGP_WSBEiJ_P0036609 Zfp459 protein_coding protein_coding MGP_WSBEiJ_T0035958.1 MGP_WSBEiJ_G0019816.1 mouse_genomes_project 13 39780829 39816924 + MGP_WSBEiJ_P0035958 Tmem170b protein_coding protein_coding MGP_WSBEiJ_T0036694.1 MGP_WSBEiJ_G0020076.1 mouse_genomes_project 13 73886107 73910048 + MGP_WSBEiJ_P0036694 Brd9 protein_coding protein_coding MGP_WSBEiJ_T0036695.1 MGP_WSBEiJ_G0020076.1 mouse_genomes_project 13 73886109 73910046 + MGP_WSBEiJ_P0036695 Brd9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000867.1 MGP_WSBEiJ_G0000805.1 mouse_genomes_project 13 101779582 101784398 + TEC TEC MGP_WSBEiJ_T0036473.1 MGP_WSBEiJ_G0019974.1 mouse_genomes_project 13 59897064 60067237 + MGP_WSBEiJ_P0036473 Dapk1 protein_coding protein_coding MGP_WSBEiJ_T0036474.1 MGP_WSBEiJ_G0019974.1 mouse_genomes_project 13 59897328 60067237 + MGP_WSBEiJ_P0036474 Dapk1 protein_coding protein_coding MGP_WSBEiJ_T0035456.1 MGP_WSBEiJ_G0019576.1 mouse_genomes_project 13 9930518 9940102 + MGP_WSBEiJ_P0035456 protein_coding protein_coding MGP_WSBEiJ_T0037328.1 MGP_WSBEiJ_G0020272.1 mouse_genomes_project 13 115910821 115917262 - MGP_WSBEiJ_P0037328 Fst protein_coding protein_coding MGP_WSBEiJ_T0037329.1 MGP_WSBEiJ_G0020272.1 mouse_genomes_project 13 115911982 115917118 - MGP_WSBEiJ_P0037329 Fst protein_coding unknown_likely_coding MGP_WSBEiJ_T0037226.1 MGP_WSBEiJ_G0020237.1 mouse_genomes_project 13 108874096 109047268 - MGP_WSBEiJ_P0037226 Zswim6 protein_coding protein_coding MGP_WSBEiJ_T0096774.1 MGP_WSBEiJ_G0035455.1 mouse_genomes_project 13 26421211 26421451 + pseudogene pseudogene MGP_WSBEiJ_T0035676.1 MGP_WSBEiJ_G0019700.1 mouse_genomes_project 13 21201541 21218628 - MGP_WSBEiJ_P0035676 Slc17a4 protein_coding protein_coding MGP_WSBEiJ_T0035677.1 MGP_WSBEiJ_G0019700.1 mouse_genomes_project 13 21201692 21218630 - MGP_WSBEiJ_P0035677 Slc17a4 protein_coding protein_coding MGP_WSBEiJ_T0036641.1 MGP_WSBEiJ_G0020054.1 mouse_genomes_project 13 69289956 69381154 + MGP_WSBEiJ_P0036641 Nsun2 protein_coding protein_coding MGP_WSBEiJ_T0036642.1 MGP_WSBEiJ_G0020054.1 mouse_genomes_project 13 69289978 69371641 + Nsun2 protein_coding processed_transcript MGP_WSBEiJ_T0036645.1 MGP_WSBEiJ_G0020054.1 mouse_genomes_project 13 69377698 69403053 + MGP_WSBEiJ_P0036645 Nsun2 protein_coding protein_coding MGP_WSBEiJ_T0036646.1 MGP_WSBEiJ_G0020054.1 mouse_genomes_project 13 69377731 69402765 + MGP_WSBEiJ_P0036646 Nsun2 protein_coding protein_coding MGP_WSBEiJ_T0036647.1 MGP_WSBEiJ_G0020054.1 mouse_genomes_project 13 69377926 69404499 + MGP_WSBEiJ_P0036647 Nsun2 protein_coding protein_coding MGP_WSBEiJ_T0036648.1 MGP_WSBEiJ_G0020054.1 mouse_genomes_project 13 69378285 69385279 + Nsun2 protein_coding processed_transcript MGP_WSBEiJ_T0036649.1 MGP_WSBEiJ_G0020054.1 mouse_genomes_project 13 69386993 69395303 + Nsun2 protein_coding retained_intron MGP_WSBEiJ_T0036650.1 MGP_WSBEiJ_G0020054.1 mouse_genomes_project 13 69396413 69397342 + Nsun2 protein_coding retained_intron MGP_WSBEiJ_T0003397.1 MGP_WSBEiJ_G0003114.1 mouse_genomes_project 13 67406362 67446720 + antisense antisense MGP_WSBEiJ_T0003398.1 MGP_WSBEiJ_G0003114.1 mouse_genomes_project 13 67435254 67447844 + antisense antisense MGP_WSBEiJ_T0100546.1 MGP_WSBEiJ_G0039004.1 mouse_genomes_project 13 20322576 20323054 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0036570.1 MGP_WSBEiJ_G0020017.1 mouse_genomes_project 13 66456789 66460756 + MGP_WSBEiJ_P0036570 Gm10767 protein_coding protein_coding MGP_WSBEiJ_T0012615.1 MGP_WSBEiJ_G0010745.1 mouse_genomes_project 13 23042427 23044333 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035587.1 MGP_WSBEiJ_G0019635.1 mouse_genomes_project 13 18854987 18859797 - MGP_WSBEiJ_P0035587 Hist1h2ao protein_coding protein_coding MGP_WSBEiJ_T0035992.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43044142 43046250 + Jarid2 protein_coding processed_transcript MGP_WSBEiJ_T0035993.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43044203 43165493 + MGP_WSBEiJ_P0035993 Jarid2 protein_coding protein_coding MGP_WSBEiJ_T0035994.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43044463 43140995 + MGP_WSBEiJ_P0035994 Jarid2 protein_coding protein_coding MGP_WSBEiJ_T0035995.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43045432 43242898 + MGP_WSBEiJ_P0035995 Jarid2 protein_coding protein_coding MGP_WSBEiJ_T0035996.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43045481 43243781 + MGP_WSBEiJ_P0035996 Jarid2 protein_coding protein_coding MGP_WSBEiJ_T0035997.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43045496 43224778 + MGP_WSBEiJ_P0035997 Jarid2 protein_coding protein_coding MGP_WSBEiJ_T0035998.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43045517 43194911 + Jarid2 protein_coding processed_transcript MGP_WSBEiJ_T0035999.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43045947 43244429 + MGP_WSBEiJ_P0035999 Jarid2 protein_coding protein_coding MGP_WSBEiJ_T0036000.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43045963 43140888 + MGP_WSBEiJ_P0036000 Jarid2 protein_coding protein_coding MGP_WSBEiJ_T0036001.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43046044 43205431 + Jarid2 protein_coding retained_intron MGP_WSBEiJ_T0036002.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43046046 43244426 + Jarid2 protein_coding retained_intron MGP_WSBEiJ_T0036003.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43046273 43205151 + MGP_WSBEiJ_P0036003 Jarid2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036004.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43046534 43194902 + Jarid2 protein_coding processed_transcript MGP_WSBEiJ_T0036005.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43049465 43194874 + Jarid2 protein_coding processed_transcript MGP_WSBEiJ_T0036006.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43157988 43237109 + MGP_WSBEiJ_P0036006 Jarid2 protein_coding protein_coding MGP_WSBEiJ_T0036007.1 MGP_WSBEiJ_G0019830.1 mouse_genomes_project 13 43158080 43217999 + MGP_WSBEiJ_P0036007 Jarid2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0099073.1 MGP_WSBEiJ_G0037736.1 mouse_genomes_project 13 108094422 108094488 - Gm24431 snoRNA snoRNA MGP_WSBEiJ_T0006447.1 MGP_WSBEiJ_G0005351.1 mouse_genomes_project 13 30129328 30133096 - Gm11381 lincRNA lincRNA MGP_WSBEiJ_T0036489.1 MGP_WSBEiJ_G0019987.1 mouse_genomes_project 13 60901803 60979899 - MGP_WSBEiJ_P0036489 Ctsm protein_coding protein_coding MGP_WSBEiJ_T0097826.1 MGP_WSBEiJ_G0036489.1 mouse_genomes_project 13 113641483 113641636 + Gm22768 snRNA snRNA MGP_WSBEiJ_T0036485.1 MGP_WSBEiJ_G0019983.1 mouse_genomes_project 13 60486581 60493113 - MGP_WSBEiJ_P0036485 Ctsr protein_coding protein_coding MGP_WSBEiJ_T0009796.1 MGP_WSBEiJ_G0007953.1 mouse_genomes_project 13 76341043 76341119 - Gm24025 miRNA miRNA MGP_WSBEiJ_T0000857.1 MGP_WSBEiJ_G0000795.1 mouse_genomes_project 13 79319120 79319582 - TEC TEC MGP_WSBEiJ_T0003428.1 MGP_WSBEiJ_G0003129.1 mouse_genomes_project 13 100895480 100897025 - BC001981 antisense antisense MGP_WSBEiJ_T0003429.1 MGP_WSBEiJ_G0003129.1 mouse_genomes_project 13 100896720 100897023 - BC001981 antisense antisense MGP_WSBEiJ_T0036562.1 MGP_WSBEiJ_G0020014.1 mouse_genomes_project 13 64816048 64837465 + MGP_WSBEiJ_P0036562 protein_coding protein_coding MGP_WSBEiJ_T0036563.1 MGP_WSBEiJ_G0020014.1 mouse_genomes_project 13 64816086 64825645 + protein_coding retained_intron MGP_WSBEiJ_T0036564.1 MGP_WSBEiJ_G0020014.1 mouse_genomes_project 13 64816137 64823129 + MGP_WSBEiJ_P0036564 protein_coding protein_coding MGP_WSBEiJ_T0036565.1 MGP_WSBEiJ_G0020014.1 mouse_genomes_project 13 64816538 64837469 + MGP_WSBEiJ_P0036565 protein_coding unknown_likely_coding MGP_WSBEiJ_T0036566.1 MGP_WSBEiJ_G0020014.1 mouse_genomes_project 13 64823009 64837469 + MGP_WSBEiJ_P0036566 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035935.1 MGP_WSBEiJ_G0019806.1 mouse_genomes_project 13 39004727 39110333 + MGP_WSBEiJ_P0035935 Gcnt2 protein_coding protein_coding MGP_WSBEiJ_T0035936.1 MGP_WSBEiJ_G0019806.1 mouse_genomes_project 13 39034791 39110333 + MGP_WSBEiJ_P0035936 Gcnt2 protein_coding protein_coding MGP_WSBEiJ_T0035937.1 MGP_WSBEiJ_G0019806.1 mouse_genomes_project 13 39066881 39110333 + MGP_WSBEiJ_P0035937 Gcnt2 protein_coding protein_coding MGP_WSBEiJ_T0006518.1 MGP_WSBEiJ_G0005400.1 mouse_genomes_project 13 96749793 96750760 + Gm29543 lincRNA lincRNA MGP_WSBEiJ_T0036335.1 MGP_WSBEiJ_G0019930.1 mouse_genomes_project 13 54560558 54570970 + MGP_WSBEiJ_P0036335 B4galt7 protein_coding protein_coding MGP_WSBEiJ_T0036336.1 MGP_WSBEiJ_G0019930.1 mouse_genomes_project 13 54560727 54568667 + B4galt7 protein_coding retained_intron MGP_WSBEiJ_T0036337.1 MGP_WSBEiJ_G0019930.1 mouse_genomes_project 13 54560727 54569451 + MGP_WSBEiJ_P0036337 B4galt7 protein_coding protein_coding MGP_WSBEiJ_T0036338.1 MGP_WSBEiJ_G0019930.1 mouse_genomes_project 13 54560727 54570969 + MGP_WSBEiJ_P0036338 B4galt7 protein_coding protein_coding MGP_WSBEiJ_T0002443.1 MGP_WSBEiJ_G0002359.1 mouse_genomes_project 13 16153362 16156108 + MGP_WSBEiJ_P0002443 Tcrg-C2 TR_C_gene TR_C_gene MGP_WSBEiJ_T0012610.1 MGP_WSBEiJ_G0010740.1 mouse_genomes_project 13 21727907 21728242 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037057.1 MGP_WSBEiJ_G0020184.1 mouse_genomes_project 13 99036135 99044135 - MGP_WSBEiJ_P0037057 Btf3 protein_coding protein_coding MGP_WSBEiJ_T0037058.1 MGP_WSBEiJ_G0020184.1 mouse_genomes_project 13 99040197 99044164 - Btf3 protein_coding retained_intron MGP_WSBEiJ_T0036015.1 MGP_WSBEiJ_G0019835.1 mouse_genomes_project 13 43901515 44345557 - MGP_WSBEiJ_P0036015 Atxn1 protein_coding protein_coding MGP_WSBEiJ_T0036016.1 MGP_WSBEiJ_G0019835.1 mouse_genomes_project 13 43901515 44345557 - MGP_WSBEiJ_P0036016 Atxn1 protein_coding protein_coding MGP_WSBEiJ_T0036017.1 MGP_WSBEiJ_G0019835.1 mouse_genomes_project 13 43901515 44345557 - MGP_WSBEiJ_P0036017 Atxn1 protein_coding protein_coding MGP_WSBEiJ_T0009812.1 MGP_WSBEiJ_G0007969.1 mouse_genomes_project 13 116051827 116051927 + Gm25950 miRNA miRNA MGP_WSBEiJ_T0011155.1 MGP_WSBEiJ_G0009312.1 mouse_genomes_project 13 53300058 53300318 - Gm22668 misc_RNA misc_RNA MGP_WSBEiJ_T0035356.1 MGP_WSBEiJ_G0019551.1 mouse_genomes_project 13 1100780 1118430 - MGP_WSBEiJ_P0035356 Akr1e1 protein_coding protein_coding MGP_WSBEiJ_T0035357.1 MGP_WSBEiJ_G0019551.1 mouse_genomes_project 13 1102513 1118430 - MGP_WSBEiJ_P0035357 Akr1e1 protein_coding protein_coding MGP_WSBEiJ_T0035358.1 MGP_WSBEiJ_G0019551.1 mouse_genomes_project 13 1111300 1118390 - Akr1e1 protein_coding processed_transcript MGP_WSBEiJ_T0003405.1 MGP_WSBEiJ_G0003119.1 mouse_genomes_project 13 73959279 73960465 - Gm15912 antisense antisense MGP_WSBEiJ_T0037317.1 MGP_WSBEiJ_G0020265.1 mouse_genomes_project 13 114573730 114631616 - MGP_WSBEiJ_P0037317 Gzmk protein_coding protein_coding MGP_WSBEiJ_T0037318.1 MGP_WSBEiJ_G0020265.1 mouse_genomes_project 13 114573760 114584899 - MGP_WSBEiJ_P0037318 Gzmk protein_coding protein_coding MGP_WSBEiJ_T0037319.1 MGP_WSBEiJ_G0020265.1 mouse_genomes_project 13 114573914 114584923 - MGP_WSBEiJ_P0037319 Gzmk protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0036997.1 MGP_WSBEiJ_G0020163.1 mouse_genomes_project 13 96197212 96215246 - MGP_WSBEiJ_P0036997 F2r protein_coding protein_coding MGP_WSBEiJ_T0037325.1 MGP_WSBEiJ_G0020269.1 mouse_genomes_project 13 115076438 115077219 - MGP_WSBEiJ_P0037325 Hspb3 protein_coding protein_coding MGP_WSBEiJ_T0012598.1 MGP_WSBEiJ_G0010728.1 mouse_genomes_project 13 19021893 19023522 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0037348.1 MGP_WSBEiJ_G0020279.1 mouse_genomes_project 13 118833033 118835390 - MGP_WSBEiJ_P0037348 Gm17509 protein_coding protein_coding MGP_WSBEiJ_T0012624.1 MGP_WSBEiJ_G0010754.1 mouse_genomes_project 13 27863354 27863783 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035417.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6267381 6352095 - MGP_WSBEiJ_P0035417 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035418.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6267381 6352160 - MGP_WSBEiJ_P0035418 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035419.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6267381 6353004 - MGP_WSBEiJ_P0035419 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035420.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6267383 6352850 - MGP_WSBEiJ_P0035420 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035421.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6267386 6275126 - Zmynd11 protein_coding retained_intron MGP_WSBEiJ_T0035422.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6267386 6352142 - MGP_WSBEiJ_P0035422 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035423.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6267640 6352646 - MGP_WSBEiJ_P0035423 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035424.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6270704 6309562 - MGP_WSBEiJ_P0035424 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035425.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6272991 6274363 - Zmynd11 protein_coding retained_intron MGP_WSBEiJ_T0035426.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6277323 6279990 - Zmynd11 protein_coding retained_intron MGP_WSBEiJ_T0035427.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6278135 6352960 - MGP_WSBEiJ_P0035427 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035428.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6278981 6352116 - MGP_WSBEiJ_P0035428 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035429.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6281481 6352627 - MGP_WSBEiJ_P0035429 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035430.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6281481 6353011 - MGP_WSBEiJ_P0035430 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035431.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6281500 6324555 - Zmynd11 protein_coding processed_transcript MGP_WSBEiJ_T0035432.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6281537 6324197 - Zmynd11 protein_coding processed_transcript MGP_WSBEiJ_T0035433.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6281540 6352090 - MGP_WSBEiJ_P0035433 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035434.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6282495 6324663 - MGP_WSBEiJ_P0035434 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0035435.1 MGP_WSBEiJ_G0019566.1 mouse_genomes_project 13 6297791 6352126 - MGP_WSBEiJ_P0035435 Zmynd11 protein_coding protein_coding MGP_WSBEiJ_T0009760.1 MGP_WSBEiJ_G0007917.1 mouse_genomes_project 13 14656350 14656471 + Mir466i miRNA miRNA MGP_WSBEiJ_T0006501.1 MGP_WSBEiJ_G0005389.1 mouse_genomes_project 13 79984681 80170421 - lincRNA lincRNA MGP_WSBEiJ_T0011151.1 MGP_WSBEiJ_G0009308.1 mouse_genomes_project 13 36975946 36976174 - Gm22035 misc_RNA misc_RNA MGP_WSBEiJ_T0009805.1 MGP_WSBEiJ_G0007962.1 mouse_genomes_project 13 99298387 99298493 + Gm22698 miRNA miRNA MGP_WSBEiJ_T0036728.1 MGP_WSBEiJ_G0020090.1 mouse_genomes_project 13 74675499 74794589 - MGP_WSBEiJ_P0036728 Cast protein_coding unknown_likely_coding MGP_WSBEiJ_T0036729.1 MGP_WSBEiJ_G0020090.1 mouse_genomes_project 13 74677353 74794000 - MGP_WSBEiJ_P0036729 Cast protein_coding protein_coding MGP_WSBEiJ_T0036371.1 MGP_WSBEiJ_G0019946.1 mouse_genomes_project 13 55572903 55578978 - MGP_WSBEiJ_P0036371 Lect2 protein_coding protein_coding MGP_WSBEiJ_T0035589.1 MGP_WSBEiJ_G0019637.1 mouse_genomes_project 13 18858175 18859766 - MGP_WSBEiJ_P0035589 Hist1h2an protein_coding protein_coding MGP_WSBEiJ_T0016748.1 MGP_WSBEiJ_G0014665.1 mouse_genomes_project 13 20542035 20610438 + 4930586N03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0035642.1 MGP_WSBEiJ_G0019675.1 mouse_genomes_project 13 20801391 20802682 + MGP_WSBEiJ_P0035642 Hist1h3g protein_coding protein_coding MGP_WSBEiJ_T0035721.1 MGP_WSBEiJ_G0019711.1 mouse_genomes_project 13 22186561 22253119 + MGP_WSBEiJ_P0035721 D130043K22Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0035722.1 MGP_WSBEiJ_G0019711.1 mouse_genomes_project 13 22186570 22249121 + MGP_WSBEiJ_P0035722 D130043K22Rik protein_coding protein_coding MGP_WSBEiJ_T0035723.1 MGP_WSBEiJ_G0019711.1 mouse_genomes_project 13 22186570 22249114 + MGP_WSBEiJ_P0035723 D130043K22Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0035724.1 MGP_WSBEiJ_G0019711.1 mouse_genomes_project 13 22223642 22225777 + D130043K22Rik protein_coding processed_transcript MGP_WSBEiJ_T0035725.1 MGP_WSBEiJ_G0019711.1 mouse_genomes_project 13 22239834 22247696 + D130043K22Rik protein_coding processed_transcript MGP_WSBEiJ_T0035568.1 MGP_WSBEiJ_G0019620.1 mouse_genomes_project 13 18598030 18599084 - MGP_WSBEiJ_P0035568 protein_coding protein_coding MGP_WSBEiJ_T0035570.1 MGP_WSBEiJ_G0019620.1 mouse_genomes_project 13 18598294 18603844 - MGP_WSBEiJ_P0035570 protein_coding protein_coding MGP_WSBEiJ_T0009786.1 MGP_WSBEiJ_G0007943.1 mouse_genomes_project 13 57579286 57579394 - Mir7-1 miRNA miRNA MGP_WSBEiJ_T0099057.1 MGP_WSBEiJ_G0037720.1 mouse_genomes_project 13 69944721 69944849 + Gm26018 snoRNA snoRNA MGP_WSBEiJ_T0012635.1 MGP_WSBEiJ_G0010765.1 mouse_genomes_project 13 42733685 42734665 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0035463.1 MGP_WSBEiJ_G0019582.1 mouse_genomes_project 13 10804112 10805486 - MGP_WSBEiJ_P0035463 Gm18856 protein_coding protein_coding MGP_WSBEiJ_T0035928.1 MGP_WSBEiJ_G0019802.1 mouse_genomes_project 13 37010971 37039356 - MGP_WSBEiJ_P0035928 Slc35b3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0035929.1 MGP_WSBEiJ_G0019802.1 mouse_genomes_project 13 37010979 37039370 - MGP_WSBEiJ_P0035929 Slc35b3 protein_coding protein_coding MGP_WSBEiJ_T0035930.1 MGP_WSBEiJ_G0019802.1 mouse_genomes_project 13 37010979 37039708 - MGP_WSBEiJ_P0035930 Slc35b3 protein_coding protein_coding MGP_WSBEiJ_T0009776.1 MGP_WSBEiJ_G0007933.1 mouse_genomes_project 13 47076116 47076213 + Gm24111 miRNA miRNA MGP_WSBEiJ_T0036012.1 MGP_WSBEiJ_G0019834.1 mouse_genomes_project 13 43858068 43898140 + MGP_WSBEiJ_P0036012 Gmpr protein_coding protein_coding MGP_WSBEiJ_T0036013.1 MGP_WSBEiJ_G0019834.1 mouse_genomes_project 13 43864457 43897656 + MGP_WSBEiJ_P0036013 Gmpr protein_coding protein_coding MGP_WSBEiJ_T0036014.1 MGP_WSBEiJ_G0019834.1 mouse_genomes_project 13 43890569 43894308 + Gmpr protein_coding retained_intron MGP_WSBEiJ_T0099061.1 MGP_WSBEiJ_G0037724.1 mouse_genomes_project 13 75976866 75976997 - Gm23319 snoRNA snoRNA MGP_WSBEiJ_T0036677.1 MGP_WSBEiJ_G0020068.1 mouse_genomes_project 13 73455052 73496739 + MGP_WSBEiJ_P0036677 Slc6a3 protein_coding protein_coding MGP_WSBEiJ_T0036826.1 MGP_WSBEiJ_G0020113.1 mouse_genomes_project 13 84404074 84484083 + MGP_WSBEiJ_P0036826 Tmem161b protein_coding protein_coding MGP_WSBEiJ_T0006483.1 MGP_WSBEiJ_G0005375.1 mouse_genomes_project 13 53811377 53812621 + 5330429C05Rik lincRNA lincRNA MGP_WSBEiJ_T0100523.1 MGP_WSBEiJ_G0038981.1 mouse_genomes_project 13 18785948 18787523 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000848.1 MGP_WSBEiJ_G0000786.1 mouse_genomes_project 13 38883407 38886059 - TEC TEC MGP_WSBEiJ_T0039946.1 MGP_WSBEiJ_G0021118.1 mouse_genomes_project 15 36168017 36286211 - MGP_WSBEiJ_P0039946 Ubr5 protein_coding protein_coding MGP_WSBEiJ_T0039947.1 MGP_WSBEiJ_G0021118.1 mouse_genomes_project 15 36168983 36285826 - MGP_WSBEiJ_P0039947 Ubr5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0097493.1 MGP_WSBEiJ_G0036160.1 mouse_genomes_project 15 57657055 57658548 - Gm20712 sense_overlapping sense_overlapping MGP_WSBEiJ_T0040233.1 MGP_WSBEiJ_G0021223.1 mouse_genomes_project 15 68095140 68260876 + MGP_WSBEiJ_P0040233 Khdrbs3 protein_coding protein_coding MGP_WSBEiJ_T0012807.1 MGP_WSBEiJ_G0010937.1 mouse_genomes_project 15 86122861 86123269 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040995.1 MGP_WSBEiJ_G0021436.1 mouse_genomes_project 15 82217029 82232723 + MGP_WSBEiJ_P0040995 Csdc2 protein_coding protein_coding MGP_WSBEiJ_T0040996.1 MGP_WSBEiJ_G0021436.1 mouse_genomes_project 15 82217248 82228651 + MGP_WSBEiJ_P0040996 Csdc2 protein_coding protein_coding MGP_WSBEiJ_T0040997.1 MGP_WSBEiJ_G0021436.1 mouse_genomes_project 15 82227512 82228669 + Csdc2 protein_coding processed_transcript MGP_WSBEiJ_T0040998.1 MGP_WSBEiJ_G0021436.1 mouse_genomes_project 15 82228742 82232716 + Csdc2 protein_coding retained_intron MGP_WSBEiJ_T0041928.1 MGP_WSBEiJ_G0021744.1 mouse_genomes_project 15 105056026 105058981 + MGP_WSBEiJ_P0041928 Hnrnpa1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041929.1 MGP_WSBEiJ_G0021744.1 mouse_genomes_project 15 105057434 105062463 + MGP_WSBEiJ_P0041929 Hnrnpa1 protein_coding protein_coding MGP_WSBEiJ_T0041768.1 MGP_WSBEiJ_G0021682.1 mouse_genomes_project 15 103069846 103070787 + protein_coding processed_transcript MGP_WSBEiJ_T0041769.1 MGP_WSBEiJ_G0021682.1 mouse_genomes_project 15 103069855 103071199 + protein_coding processed_transcript MGP_WSBEiJ_T0041770.1 MGP_WSBEiJ_G0021682.1 mouse_genomes_project 15 103069855 103090570 + protein_coding processed_transcript MGP_WSBEiJ_T0041771.1 MGP_WSBEiJ_G0021682.1 mouse_genomes_project 15 103069906 103078615 + MGP_WSBEiJ_P0041771 protein_coding protein_coding MGP_WSBEiJ_T0041772.1 MGP_WSBEiJ_G0021682.1 mouse_genomes_project 15 103070187 103090758 + MGP_WSBEiJ_P0041772 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041773.1 MGP_WSBEiJ_G0021682.1 mouse_genomes_project 15 103071252 103090748 + protein_coding retained_intron MGP_WSBEiJ_T0041274.1 MGP_WSBEiJ_G0021528.1 mouse_genomes_project 15 89996786 90011019 - MGP_WSBEiJ_P0041274 Dennd6b protein_coding protein_coding MGP_WSBEiJ_T0097890.1 MGP_WSBEiJ_G0036553.1 mouse_genomes_project 15 32605268 32605378 + Gm22208 snRNA snRNA MGP_WSBEiJ_T0012814.1 MGP_WSBEiJ_G0010944.1 mouse_genomes_project 15 100669589 100676928 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040766.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79277978 79299696 + MGP_WSBEiJ_P0040766 Pick1 protein_coding protein_coding MGP_WSBEiJ_T0040767.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79278187 79299678 + MGP_WSBEiJ_P0040767 Pick1 protein_coding protein_coding MGP_WSBEiJ_T0040768.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79278216 79298175 + Pick1 protein_coding retained_intron MGP_WSBEiJ_T0040769.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79278221 79298175 + Pick1 protein_coding retained_intron MGP_WSBEiJ_T0040770.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79278263 79283111 + Pick1 protein_coding processed_transcript MGP_WSBEiJ_T0040771.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79278310 79290155 + Pick1 protein_coding retained_intron MGP_WSBEiJ_T0040772.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79278507 79299541 + MGP_WSBEiJ_P0040772 Pick1 protein_coding protein_coding MGP_WSBEiJ_T0040773.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79291734 79297854 + Pick1 protein_coding processed_transcript MGP_WSBEiJ_T0040774.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79295098 79297822 + Pick1 protein_coding processed_transcript MGP_WSBEiJ_T0040775.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79295495 79297946 + Pick1 protein_coding processed_transcript MGP_WSBEiJ_T0040776.1 MGP_WSBEiJ_G0021379.1 mouse_genomes_project 15 79296556 79299678 + Pick1 protein_coding processed_transcript MGP_WSBEiJ_T0040173.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64894642 64898960 + Efr3a protein_coding processed_transcript MGP_WSBEiJ_T0040174.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64894648 64984843 + MGP_WSBEiJ_P0040174 Efr3a protein_coding protein_coding MGP_WSBEiJ_T0040175.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64894649 64898443 + Efr3a protein_coding processed_transcript MGP_WSBEiJ_T0040176.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64894649 64980289 + MGP_WSBEiJ_P0040176 Efr3a protein_coding protein_coding MGP_WSBEiJ_T0040177.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64894650 64942098 + Efr3a protein_coding processed_transcript MGP_WSBEiJ_T0040178.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64894654 64937764 + MGP_WSBEiJ_P0040178 Efr3a protein_coding protein_coding MGP_WSBEiJ_T0040179.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64894656 64934841 + Efr3a protein_coding retained_intron MGP_WSBEiJ_T0040180.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64894656 64932161 + MGP_WSBEiJ_P0040180 Efr3a protein_coding protein_coding MGP_WSBEiJ_T0040181.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64895448 64898449 + Efr3a protein_coding processed_transcript MGP_WSBEiJ_T0040182.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64959260 64965755 + Efr3a protein_coding retained_intron MGP_WSBEiJ_T0040183.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64964424 64966659 + Efr3a protein_coding retained_intron MGP_WSBEiJ_T0040184.1 MGP_WSBEiJ_G0021210.1 mouse_genomes_project 15 64966430 64978216 + Efr3a protein_coding retained_intron MGP_WSBEiJ_T0003570.1 MGP_WSBEiJ_G0003236.1 mouse_genomes_project 15 104910372 104913238 + Gm10830 antisense antisense MGP_WSBEiJ_T0011197.1 MGP_WSBEiJ_G0009354.1 mouse_genomes_project 15 100588942 100589030 - Gm25057 misc_RNA misc_RNA MGP_WSBEiJ_T0009918.1 MGP_WSBEiJ_G0008075.1 mouse_genomes_project 15 83405973 83406052 - Mir3080 miRNA miRNA MGP_WSBEiJ_T0099177.1 MGP_WSBEiJ_G0037840.1 mouse_genomes_project 15 99879902 99880039 - Snora2b snoRNA snoRNA MGP_WSBEiJ_T0041206.1 MGP_WSBEiJ_G0021508.1 mouse_genomes_project 15 86798121 86818087 - Cerk protein_coding retained_intron MGP_WSBEiJ_T0041207.1 MGP_WSBEiJ_G0021508.1 mouse_genomes_project 15 86798122 86849619 - MGP_WSBEiJ_P0041207 Cerk protein_coding protein_coding MGP_WSBEiJ_T0041208.1 MGP_WSBEiJ_G0021508.1 mouse_genomes_project 15 86799317 86811457 - MGP_WSBEiJ_P0041208 Cerk protein_coding protein_coding MGP_WSBEiJ_T0040493.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75983771 75986850 + MGP_WSBEiJ_P0040493 Maf1 protein_coding protein_coding MGP_WSBEiJ_T0040494.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75983771 75986851 + MGP_WSBEiJ_P0040494 Maf1 protein_coding protein_coding MGP_WSBEiJ_T0040495.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75983783 75986851 + MGP_WSBEiJ_P0040495 Maf1 protein_coding protein_coding MGP_WSBEiJ_T0040496.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75983786 75985484 + Maf1 protein_coding retained_intron MGP_WSBEiJ_T0040497.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75983804 75984925 + Maf1 protein_coding processed_transcript MGP_WSBEiJ_T0040498.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75983804 75986858 + MGP_WSBEiJ_P0040498 Maf1 protein_coding protein_coding MGP_WSBEiJ_T0040499.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75983830 75984545 + Maf1 protein_coding retained_intron MGP_WSBEiJ_T0040500.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75983886 75985377 + Maf1 protein_coding retained_intron MGP_WSBEiJ_T0040501.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75984483 75985664 + MGP_WSBEiJ_P0040501 Maf1 protein_coding protein_coding MGP_WSBEiJ_T0040502.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75984511 75985378 + Maf1 protein_coding retained_intron MGP_WSBEiJ_T0040503.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75985247 75986469 + Maf1 protein_coding retained_intron MGP_WSBEiJ_T0040504.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75985371 75986504 + Maf1 protein_coding retained_intron MGP_WSBEiJ_T0040505.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75985578 75986551 + Maf1 protein_coding retained_intron MGP_WSBEiJ_T0040506.1 MGP_WSBEiJ_G0021297.1 mouse_genomes_project 15 75985892 75986593 + MGP_WSBEiJ_P0040506 Maf1 protein_coding protein_coding MGP_WSBEiJ_T0041789.1 MGP_WSBEiJ_G0021697.1 mouse_genomes_project 15 103531205 103538500 - MGP_WSBEiJ_P0041789 Krt2 protein_coding protein_coding MGP_WSBEiJ_T0041151.1 MGP_WSBEiJ_G0021488.1 mouse_genomes_project 15 85349626 85422178 - MGP_WSBEiJ_P0041151 Phf21b protein_coding protein_coding MGP_WSBEiJ_T0041152.1 MGP_WSBEiJ_G0021488.1 mouse_genomes_project 15 85349627 85351697 - Phf21b protein_coding processed_transcript MGP_WSBEiJ_T0041153.1 MGP_WSBEiJ_G0021488.1 mouse_genomes_project 15 85349629 85423117 - MGP_WSBEiJ_P0041153 Phf21b protein_coding protein_coding MGP_WSBEiJ_T0041154.1 MGP_WSBEiJ_G0021488.1 mouse_genomes_project 15 85350378 85422819 - MGP_WSBEiJ_P0041154 Phf21b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041155.1 MGP_WSBEiJ_G0021488.1 mouse_genomes_project 15 85351618 85355746 - Phf21b protein_coding retained_intron MGP_WSBEiJ_T0041156.1 MGP_WSBEiJ_G0021488.1 mouse_genomes_project 15 85358804 85367719 - Phf21b protein_coding retained_intron MGP_WSBEiJ_T0099179.1 MGP_WSBEiJ_G0037842.1 mouse_genomes_project 15 100682486 100682619 - Gm25999 snoRNA snoRNA MGP_WSBEiJ_T0009892.1 MGP_WSBEiJ_G0008049.1 mouse_genomes_project 15 67488590 67488686 - Mir30b miRNA miRNA MGP_WSBEiJ_T0040394.1 MGP_WSBEiJ_G0021275.1 mouse_genomes_project 15 75509116 75514202 - MGP_WSBEiJ_P0040394 Pycrl protein_coding protein_coding MGP_WSBEiJ_T0040034.1 MGP_WSBEiJ_G0021157.1 mouse_genomes_project 15 52152566 52616734 - Samd12 protein_coding processed_transcript MGP_WSBEiJ_T0040035.1 MGP_WSBEiJ_G0021157.1 mouse_genomes_project 15 52152746 52616727 - MGP_WSBEiJ_P0040035 Samd12 protein_coding protein_coding MGP_WSBEiJ_T0040036.1 MGP_WSBEiJ_G0021157.1 mouse_genomes_project 15 52153139 52616578 - MGP_WSBEiJ_P0040036 Samd12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040037.1 MGP_WSBEiJ_G0021157.1 mouse_genomes_project 15 52532217 52616734 - Samd12 protein_coding processed_transcript MGP_WSBEiJ_T0040742.1 MGP_WSBEiJ_G0021373.1 mouse_genomes_project 15 79091304 79101096 - MGP_WSBEiJ_P0040742 Ankrd54 protein_coding protein_coding MGP_WSBEiJ_T0040743.1 MGP_WSBEiJ_G0021373.1 mouse_genomes_project 15 79091314 79101096 - Ankrd54 protein_coding retained_intron MGP_WSBEiJ_T0040744.1 MGP_WSBEiJ_G0021373.1 mouse_genomes_project 15 79091784 79093624 - MGP_WSBEiJ_P0040744 Ankrd54 protein_coding protein_coding MGP_WSBEiJ_T0040745.1 MGP_WSBEiJ_G0021373.1 mouse_genomes_project 15 79091978 79093555 - MGP_WSBEiJ_P0040745 Ankrd54 protein_coding protein_coding MGP_WSBEiJ_T0040746.1 MGP_WSBEiJ_G0021373.1 mouse_genomes_project 15 79093596 79101093 - MGP_WSBEiJ_P0040746 Ankrd54 protein_coding protein_coding MGP_WSBEiJ_T0040747.1 MGP_WSBEiJ_G0021373.1 mouse_genomes_project 15 79093625 79101047 - MGP_WSBEiJ_P0040747 Ankrd54 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040748.1 MGP_WSBEiJ_G0021373.1 mouse_genomes_project 15 79097831 79101104 - Ankrd54 protein_coding retained_intron MGP_WSBEiJ_T0099160.1 MGP_WSBEiJ_G0037823.1 mouse_genomes_project 15 52311559 52311691 - Gm23200 snoRNA snoRNA MGP_WSBEiJ_T0040619.1 MGP_WSBEiJ_G0021329.1 mouse_genomes_project 15 76700300 76707599 - MGP_WSBEiJ_P0040619 Mb protein_coding protein_coding MGP_WSBEiJ_T0040620.1 MGP_WSBEiJ_G0021329.1 mouse_genomes_project 15 76700300 76735650 - MGP_WSBEiJ_P0040620 Mb protein_coding protein_coding MGP_WSBEiJ_T0040621.1 MGP_WSBEiJ_G0021329.1 mouse_genomes_project 15 76700300 76707539 - MGP_WSBEiJ_P0040621 Mb protein_coding protein_coding MGP_WSBEiJ_T0099154.1 MGP_WSBEiJ_G0037817.1 mouse_genomes_project 15 40185503 40185605 + Gm24751 snoRNA snoRNA MGP_WSBEiJ_T0041713.1 MGP_WSBEiJ_G0021669.1 mouse_genomes_project 15 102219226 102247175 - MGP_WSBEiJ_P0041713 Bin2 protein_coding protein_coding MGP_WSBEiJ_T0041714.1 MGP_WSBEiJ_G0021669.1 mouse_genomes_project 15 102219232 102247127 - MGP_WSBEiJ_P0041714 Bin2 protein_coding protein_coding MGP_WSBEiJ_T0041715.1 MGP_WSBEiJ_G0021669.1 mouse_genomes_project 15 102219232 102247149 - MGP_WSBEiJ_P0041715 Bin2 protein_coding protein_coding MGP_WSBEiJ_T0041716.1 MGP_WSBEiJ_G0021669.1 mouse_genomes_project 15 102223337 102247127 - MGP_WSBEiJ_P0041716 Bin2 protein_coding protein_coding MGP_WSBEiJ_T0041717.1 MGP_WSBEiJ_G0021669.1 mouse_genomes_project 15 102223433 102247147 - MGP_WSBEiJ_P0041717 Bin2 protein_coding protein_coding MGP_WSBEiJ_T0041718.1 MGP_WSBEiJ_G0021669.1 mouse_genomes_project 15 102223475 102229428 - Bin2 protein_coding processed_transcript MGP_WSBEiJ_T0041719.1 MGP_WSBEiJ_G0021669.1 mouse_genomes_project 15 102226900 102228487 - Bin2 protein_coding retained_intron MGP_WSBEiJ_T0100020.1 MGP_WSBEiJ_G0038655.1 mouse_genomes_project 15 2146987 2147381 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0041697.1 MGP_WSBEiJ_G0021663.1 mouse_genomes_project 15 102039799 102050075 + MGP_WSBEiJ_P0041697 Letmd1 protein_coding protein_coding MGP_WSBEiJ_T0099152.1 MGP_WSBEiJ_G0037815.1 mouse_genomes_project 15 36262061 36262197 + Gm22353 snoRNA snoRNA MGP_WSBEiJ_T0097917.1 MGP_WSBEiJ_G0036580.1 mouse_genomes_project 15 81845041 81845148 + Gm22067 snRNA snRNA MGP_WSBEiJ_T0041549.1 MGP_WSBEiJ_G0021609.1 mouse_genomes_project 15 99961481 99976182 - MGP_WSBEiJ_P0041549 Adcy6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041550.1 MGP_WSBEiJ_G0021609.1 mouse_genomes_project 15 99961489 99980364 - MGP_WSBEiJ_P0041550 Adcy6 protein_coding protein_coding MGP_WSBEiJ_T0040100.1 MGP_WSBEiJ_G0021180.1 mouse_genomes_project 15 56879359 56909672 - MGP_WSBEiJ_P0040100 Zhx1 protein_coding protein_coding MGP_WSBEiJ_T0040101.1 MGP_WSBEiJ_G0021180.1 mouse_genomes_project 15 56879359 56909916 - MGP_WSBEiJ_P0040101 Zhx1 protein_coding protein_coding MGP_WSBEiJ_T0040102.1 MGP_WSBEiJ_G0021180.1 mouse_genomes_project 15 56879661 56909896 - MGP_WSBEiJ_P0040102 Zhx1 protein_coding protein_coding MGP_WSBEiJ_T0040105.1 MGP_WSBEiJ_G0021180.1 mouse_genomes_project 15 56885340 56909641 - MGP_WSBEiJ_P0040105 Zhx1 protein_coding protein_coding MGP_WSBEiJ_T0040106.1 MGP_WSBEiJ_G0021180.1 mouse_genomes_project 15 56887274 56909790 - Zhx1 protein_coding retained_intron MGP_WSBEiJ_T0040107.1 MGP_WSBEiJ_G0021180.1 mouse_genomes_project 15 56902076 56909968 - Zhx1 protein_coding retained_intron MGP_WSBEiJ_T0039882.1 MGP_WSBEiJ_G0021099.1 mouse_genomes_project 15 32957051 33235105 - MGP_WSBEiJ_P0039882 Stk3 protein_coding protein_coding MGP_WSBEiJ_T0039883.1 MGP_WSBEiJ_G0021099.1 mouse_genomes_project 15 32957228 33235049 - MGP_WSBEiJ_P0039883 Stk3 protein_coding protein_coding MGP_WSBEiJ_T0039884.1 MGP_WSBEiJ_G0021099.1 mouse_genomes_project 15 33038992 33081889 - Stk3 protein_coding retained_intron MGP_WSBEiJ_T0039885.1 MGP_WSBEiJ_G0021099.1 mouse_genomes_project 15 33154220 33234968 - MGP_WSBEiJ_P0039885 Stk3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041710.1 MGP_WSBEiJ_G0021667.1 mouse_genomes_project 15 102192825 102197928 + MGP_WSBEiJ_P0041710 Dazap2 protein_coding protein_coding MGP_WSBEiJ_T0039940.1 MGP_WSBEiJ_G0021117.1 mouse_genomes_project 15 36117238 36160699 - MGP_WSBEiJ_P0039940 Rrm2b protein_coding protein_coding MGP_WSBEiJ_T0039941.1 MGP_WSBEiJ_G0021117.1 mouse_genomes_project 15 36126048 36160487 - MGP_WSBEiJ_P0039941 Rrm2b protein_coding protein_coding MGP_WSBEiJ_T0039942.1 MGP_WSBEiJ_G0021117.1 mouse_genomes_project 15 36130234 36160525 - MGP_WSBEiJ_P0039942 Rrm2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039943.1 MGP_WSBEiJ_G0021117.1 mouse_genomes_project 15 36144631 36154742 - Rrm2b protein_coding retained_intron MGP_WSBEiJ_T0039944.1 MGP_WSBEiJ_G0021117.1 mouse_genomes_project 15 36144736 36160445 - MGP_WSBEiJ_P0039944 Rrm2b protein_coding protein_coding MGP_WSBEiJ_T0039945.1 MGP_WSBEiJ_G0021117.1 mouse_genomes_project 15 36146335 36160948 - MGP_WSBEiJ_P0039945 Rrm2b protein_coding protein_coding MGP_WSBEiJ_T0099155.1 MGP_WSBEiJ_G0037818.1 mouse_genomes_project 15 42617438 42617564 + Gm24903 snoRNA snoRNA MGP_WSBEiJ_T0039903.1 MGP_WSBEiJ_G0021108.1 mouse_genomes_project 15 34613479 34633495 - MGP_WSBEiJ_P0039903 Ankrd46 protein_coding protein_coding MGP_WSBEiJ_T0012810.1 MGP_WSBEiJ_G0010940.1 mouse_genomes_project 15 92464776 92466216 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040194.1 MGP_WSBEiJ_G0021214.1 mouse_genomes_project 15 65487496 65612273 - MGP_WSBEiJ_P0040194 Lrrc6 protein_coding protein_coding MGP_WSBEiJ_T0041143.1 MGP_WSBEiJ_G0021485.1 mouse_genomes_project 15 85113870 85118292 - MGP_WSBEiJ_P0041143 Ldoc1l protein_coding protein_coding MGP_WSBEiJ_T0041567.1 MGP_WSBEiJ_G0021616.1 mouse_genomes_project 15 100162687 100168703 - MGP_WSBEiJ_P0041567 Wnt10b protein_coding unknown_likely_coding MGP_WSBEiJ_T0040124.1 MGP_WSBEiJ_G0021193.1 mouse_genomes_project 15 57815043 57820721 + MGP_WSBEiJ_P0040124 Ndufb9 protein_coding protein_coding MGP_WSBEiJ_T0040343.1 MGP_WSBEiJ_G0021261.1 mouse_genomes_project 15 74701972 74707545 + MGP_WSBEiJ_P0040343 BC025446 protein_coding protein_coding MGP_WSBEiJ_T0040344.1 MGP_WSBEiJ_G0021261.1 mouse_genomes_project 15 74702192 74708256 + MGP_WSBEiJ_P0040344 BC025446 protein_coding protein_coding MGP_WSBEiJ_T0039803.1 MGP_WSBEiJ_G0021067.1 mouse_genomes_project 15 23801289 23815406 + MGP_WSBEiJ_P0039803 Zfp622 protein_coding protein_coding MGP_WSBEiJ_T0039922.1 MGP_WSBEiJ_G0021114.1 mouse_genomes_project 15 35405429 35542936 + MGP_WSBEiJ_P0039922 Grhl2 protein_coding protein_coding MGP_WSBEiJ_T0039923.1 MGP_WSBEiJ_G0021114.1 mouse_genomes_project 15 35405429 35511936 + MGP_WSBEiJ_P0039923 Grhl2 protein_coding protein_coding MGP_WSBEiJ_T0039924.1 MGP_WSBEiJ_G0021114.1 mouse_genomes_project 15 35405451 35456207 + MGP_WSBEiJ_P0039924 Grhl2 protein_coding protein_coding MGP_WSBEiJ_T0039925.1 MGP_WSBEiJ_G0021114.1 mouse_genomes_project 15 35496322 35542929 + Grhl2 protein_coding processed_transcript MGP_WSBEiJ_T0039926.1 MGP_WSBEiJ_G0021114.1 mouse_genomes_project 15 35514008 35540302 + MGP_WSBEiJ_P0039926 Grhl2 protein_coding protein_coding MGP_WSBEiJ_T0040397.1 MGP_WSBEiJ_G0021278.1 mouse_genomes_project 15 75561535 75571112 + Zfp707 protein_coding retained_intron MGP_WSBEiJ_T0040398.1 MGP_WSBEiJ_G0021278.1 mouse_genomes_project 15 75561674 75571000 + MGP_WSBEiJ_P0040398 Zfp707 protein_coding protein_coding MGP_WSBEiJ_T0040399.1 MGP_WSBEiJ_G0021278.1 mouse_genomes_project 15 75561684 75570988 + MGP_WSBEiJ_P0040399 Zfp707 protein_coding protein_coding MGP_WSBEiJ_T0040400.1 MGP_WSBEiJ_G0021278.1 mouse_genomes_project 15 75562053 75570017 + MGP_WSBEiJ_P0040400 Zfp707 protein_coding protein_coding MGP_WSBEiJ_T0040401.1 MGP_WSBEiJ_G0021278.1 mouse_genomes_project 15 75568034 75569202 + Zfp707 protein_coding retained_intron MGP_WSBEiJ_T0039834.1 MGP_WSBEiJ_G0021082.1 mouse_genomes_project 15 29578398 29592728 - MGP_WSBEiJ_P0039834 Cct5 protein_coding protein_coding MGP_WSBEiJ_T0039835.1 MGP_WSBEiJ_G0021082.1 mouse_genomes_project 15 29579580 29580660 - Cct5 protein_coding retained_intron MGP_WSBEiJ_T0039836.1 MGP_WSBEiJ_G0021082.1 mouse_genomes_project 15 29581043 29582127 - Cct5 protein_coding retained_intron MGP_WSBEiJ_T0039837.1 MGP_WSBEiJ_G0021082.1 mouse_genomes_project 15 29581943 29592420 - MGP_WSBEiJ_P0039837 Cct5 protein_coding protein_coding MGP_WSBEiJ_T0039838.1 MGP_WSBEiJ_G0021082.1 mouse_genomes_project 15 29583039 29592621 - Cct5 protein_coding retained_intron MGP_WSBEiJ_T0006711.1 MGP_WSBEiJ_G0005534.1 mouse_genomes_project 15 102855238 102858164 - A330009N23Rik lincRNA lincRNA MGP_WSBEiJ_T0041097.1 MGP_WSBEiJ_G0021473.1 mouse_genomes_project 15 84053713 84066121 + MGP_WSBEiJ_P0041097 Tspo protein_coding protein_coding MGP_WSBEiJ_T0100021.1 MGP_WSBEiJ_G0038656.1 mouse_genomes_project 15 31447193 31449179 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100022.1 MGP_WSBEiJ_G0038656.1 mouse_genomes_project 15 31448407 31449142 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0009926.1 MGP_WSBEiJ_G0008083.1 mouse_genomes_project 15 89977353 89977414 - Mir7118 miRNA miRNA MGP_WSBEiJ_T0041185.1 MGP_WSBEiJ_G0021502.1 mouse_genomes_project 15 86447566 86454630 - MGP_WSBEiJ_P0041185 Pkdrej protein_coding protein_coding MGP_WSBEiJ_T0039848.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32130778 32153882 + Mtdh protein_coding retained_intron MGP_WSBEiJ_T0039849.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32130803 32197494 + MGP_WSBEiJ_P0039849 Mtdh protein_coding protein_coding MGP_WSBEiJ_T0039850.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32130809 32177108 + Mtdh protein_coding retained_intron MGP_WSBEiJ_T0039851.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32131120 32189448 + MGP_WSBEiJ_P0039851 Mtdh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039852.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32131392 32191888 + MGP_WSBEiJ_P0039852 Mtdh protein_coding protein_coding MGP_WSBEiJ_T0039853.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32131403 32191919 + MGP_WSBEiJ_P0039853 Mtdh protein_coding protein_coding MGP_WSBEiJ_T0039854.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32131406 32176506 + MGP_WSBEiJ_P0039854 Mtdh protein_coding protein_coding MGP_WSBEiJ_T0039855.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32131937 32170946 + Mtdh protein_coding processed_transcript MGP_WSBEiJ_T0039856.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32167892 32195818 + MGP_WSBEiJ_P0039856 Mtdh protein_coding protein_coding MGP_WSBEiJ_T0039857.1 MGP_WSBEiJ_G0021089.1 mouse_genomes_project 15 32187822 32196391 + Mtdh protein_coding processed_transcript MGP_WSBEiJ_T0099171.1 MGP_WSBEiJ_G0037834.1 mouse_genomes_project 15 80624388 80624525 - Gm23220 snoRNA snoRNA MGP_WSBEiJ_T0041752.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102752586 102770437 + MGP_WSBEiJ_P0041752 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041753.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102752601 102758751 + MGP_WSBEiJ_P0041753 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041754.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102752615 102768738 + MGP_WSBEiJ_P0041754 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041755.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102752615 102759374 + MGP_WSBEiJ_P0041755 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041756.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102752638 102768737 + MGP_WSBEiJ_P0041756 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041757.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102752986 102768739 + MGP_WSBEiJ_P0041757 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041758.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102752988 102768737 + MGP_WSBEiJ_P0041758 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041759.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102757471 102759525 + MGP_WSBEiJ_P0041759 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041760.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102758189 102770437 + MGP_WSBEiJ_P0041760 Acvrl1 protein_coding protein_coding MGP_WSBEiJ_T0041761.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102759719 102761099 + Acvrl1 protein_coding retained_intron MGP_WSBEiJ_T0041762.1 MGP_WSBEiJ_G0021676.1 mouse_genomes_project 15 102761666 102767723 + Acvrl1 protein_coding processed_transcript MGP_WSBEiJ_T0097929.1 MGP_WSBEiJ_G0036592.1 mouse_genomes_project 15 101415549 101415684 - Gm23133 snRNA snRNA MGP_WSBEiJ_T0003521.1 MGP_WSBEiJ_G0003197.1 mouse_genomes_project 15 3490129 3546566 - Gm2245 antisense antisense MGP_WSBEiJ_T0097888.1 MGP_WSBEiJ_G0036551.1 mouse_genomes_project 15 22610277 22610434 - Gm22810 snRNA snRNA MGP_WSBEiJ_T0041954.1 MGP_WSBEiJ_G0021752.1 mouse_genomes_project 15 105274241 105320946 + MGP_WSBEiJ_P0041954 Nckap1l protein_coding protein_coding MGP_WSBEiJ_T0011183.1 MGP_WSBEiJ_G0009340.1 mouse_genomes_project 15 7121802 7122090 + Gm26350 misc_RNA misc_RNA MGP_WSBEiJ_T0012798.1 MGP_WSBEiJ_G0010928.1 mouse_genomes_project 15 77089164 77089711 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040783.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79344115 79389028 - MGP_WSBEiJ_P0040783 Pla2g6 protein_coding protein_coding MGP_WSBEiJ_T0040784.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79344115 79388976 - MGP_WSBEiJ_P0040784 Pla2g6 protein_coding protein_coding MGP_WSBEiJ_T0040785.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79344115 79389003 - MGP_WSBEiJ_P0040785 Pla2g6 protein_coding protein_coding MGP_WSBEiJ_T0040786.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79344115 79388764 - MGP_WSBEiJ_P0040786 Pla2g6 protein_coding protein_coding MGP_WSBEiJ_T0040787.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79344119 79389053 - MGP_WSBEiJ_P0040787 Pla2g6 protein_coding protein_coding MGP_WSBEiJ_T0040788.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79346977 79362327 - Pla2g6 protein_coding retained_intron MGP_WSBEiJ_T0040789.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79360843 79363864 - Pla2g6 protein_coding retained_intron MGP_WSBEiJ_T0040790.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79363819 79366946 - Pla2g6 protein_coding retained_intron MGP_WSBEiJ_T0040791.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79367002 79389190 - MGP_WSBEiJ_P0040791 Pla2g6 protein_coding protein_coding MGP_WSBEiJ_T0040792.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79369599 79376848 - Pla2g6 protein_coding retained_intron MGP_WSBEiJ_T0040793.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79369667 79383315 - MGP_WSBEiJ_P0040793 Pla2g6 protein_coding protein_coding MGP_WSBEiJ_T0040794.1 MGP_WSBEiJ_G0021382.1 mouse_genomes_project 15 79376706 79385296 - MGP_WSBEiJ_P0040794 Pla2g6 protein_coding protein_coding MGP_WSBEiJ_T0016864.1 MGP_WSBEiJ_G0014715.1 mouse_genomes_project 15 57056420 57170614 + Gm15943 processed_transcript processed_transcript MGP_WSBEiJ_T0041225.1 MGP_WSBEiJ_G0021517.1 mouse_genomes_project 15 89695668 89764366 - MGP_WSBEiJ_P0041225 Ttll8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041226.1 MGP_WSBEiJ_G0021517.1 mouse_genomes_project 15 89716336 89764630 - MGP_WSBEiJ_P0041226 Ttll8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041227.1 MGP_WSBEiJ_G0021517.1 mouse_genomes_project 15 89719423 89764358 - MGP_WSBEiJ_P0041227 Ttll8 protein_coding protein_coding MGP_WSBEiJ_T0041228.1 MGP_WSBEiJ_G0021517.1 mouse_genomes_project 15 89719479 89764007 - MGP_WSBEiJ_P0041228 Ttll8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041229.1 MGP_WSBEiJ_G0021517.1 mouse_genomes_project 15 89721194 89725394 - Ttll8 protein_coding retained_intron MGP_WSBEiJ_T0040938.1 MGP_WSBEiJ_G0021422.1 mouse_genomes_project 15 81635067 81693338 + MGP_WSBEiJ_P0040938 Xpnpep3 protein_coding protein_coding MGP_WSBEiJ_T0040939.1 MGP_WSBEiJ_G0021422.1 mouse_genomes_project 15 81635079 81663933 + Xpnpep3 protein_coding retained_intron MGP_WSBEiJ_T0040940.1 MGP_WSBEiJ_G0021422.1 mouse_genomes_project 15 81635099 81651174 + Xpnpep3 protein_coding retained_intron MGP_WSBEiJ_T0040941.1 MGP_WSBEiJ_G0021422.1 mouse_genomes_project 15 81635117 81691419 + MGP_WSBEiJ_P0040941 Xpnpep3 protein_coding protein_coding MGP_WSBEiJ_T0040942.1 MGP_WSBEiJ_G0021422.1 mouse_genomes_project 15 81635125 81689563 + MGP_WSBEiJ_P0040942 Xpnpep3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040943.1 MGP_WSBEiJ_G0021422.1 mouse_genomes_project 15 81635126 81674142 + MGP_WSBEiJ_P0040943 Xpnpep3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040944.1 MGP_WSBEiJ_G0021422.1 mouse_genomes_project 15 81635162 81663517 + Xpnpep3 protein_coding processed_transcript MGP_WSBEiJ_T0040559.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76277094 76281034 - MGP_WSBEiJ_P0040559 Tonsl protein_coding protein_coding MGP_WSBEiJ_T0040560.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76281008 76284749 - MGP_WSBEiJ_P0040560 Tonsl protein_coding protein_coding MGP_WSBEiJ_T0040561.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76281244 76295976 - MGP_WSBEiJ_P0040561 Tonsl protein_coding protein_coding MGP_WSBEiJ_T0040562.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76281245 76284830 - Tonsl protein_coding retained_intron MGP_WSBEiJ_T0040563.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76288222 76289126 - MGP_WSBEiJ_P0040563 Tonsl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040564.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76288255 76295947 - MGP_WSBEiJ_P0040564 Tonsl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040565.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76293204 76294297 - Tonsl protein_coding retained_intron MGP_WSBEiJ_T0040566.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76294574 76295656 - Tonsl protein_coding retained_intron MGP_WSBEiJ_T0040567.1 MGP_WSBEiJ_G0021312.1 mouse_genomes_project 15 76294876 76295858 - MGP_WSBEiJ_P0040567 Tonsl protein_coding protein_coding MGP_WSBEiJ_T0099138.1 MGP_WSBEiJ_G0037801.1 mouse_genomes_project 15 17730617 17730747 + Gm25976 snoRNA snoRNA MGP_WSBEiJ_T0009873.1 MGP_WSBEiJ_G0008030.1 mouse_genomes_project 15 12005200 12005432 - Gm24080 miRNA miRNA MGP_WSBEiJ_T0040811.1 MGP_WSBEiJ_G0021387.1 mouse_genomes_project 15 79588316 79599609 + MGP_WSBEiJ_P0040811 Kdelr3 protein_coding protein_coding MGP_WSBEiJ_T0039869.1 MGP_WSBEiJ_G0021094.1 mouse_genomes_project 15 32526305 32548813 + MGP_WSBEiJ_P0039869 Erich5 protein_coding protein_coding MGP_WSBEiJ_T0040876.1 MGP_WSBEiJ_G0021404.1 mouse_genomes_project 15 80221974 80249942 + MGP_WSBEiJ_P0040876 Syngr1 protein_coding protein_coding MGP_WSBEiJ_T0040877.1 MGP_WSBEiJ_G0021404.1 mouse_genomes_project 15 80221984 80256005 + MGP_WSBEiJ_P0040877 Syngr1 protein_coding protein_coding MGP_WSBEiJ_T0040878.1 MGP_WSBEiJ_G0021404.1 mouse_genomes_project 15 80231656 80248168 + MGP_WSBEiJ_P0040878 Syngr1 protein_coding protein_coding MGP_WSBEiJ_T0040879.1 MGP_WSBEiJ_G0021404.1 mouse_genomes_project 15 80251976 80252769 + MGP_WSBEiJ_P0040879 Syngr1 protein_coding protein_coding MGP_WSBEiJ_T0099151.1 MGP_WSBEiJ_G0037814.1 mouse_genomes_project 15 33577681 33577818 + Gm24771 snoRNA snoRNA MGP_WSBEiJ_T0006679.1 MGP_WSBEiJ_G0005511.1 mouse_genomes_project 15 67492152 67516372 - Gm20732 lincRNA lincRNA MGP_WSBEiJ_T0099167.1 MGP_WSBEiJ_G0037830.1 mouse_genomes_project 15 68868089 68868218 - Gm23987 snoRNA snoRNA MGP_WSBEiJ_T0041247.1 MGP_WSBEiJ_G0021522.1 mouse_genomes_project 15 89896646 89907108 + MGP_WSBEiJ_P0041247 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041248.1 MGP_WSBEiJ_G0021522.1 mouse_genomes_project 15 89896646 89909263 + MGP_WSBEiJ_P0041248 protein_coding protein_coding MGP_WSBEiJ_T0039562.1 MGP_WSBEiJ_G0021000.1 mouse_genomes_project 15 874620 1014440 + MGP_WSBEiJ_P0039562 Oxct1 protein_coding protein_coding MGP_WSBEiJ_T0039563.1 MGP_WSBEiJ_G0021000.1 mouse_genomes_project 15 874921 1013061 + MGP_WSBEiJ_P0039563 Oxct1 protein_coding protein_coding MGP_WSBEiJ_T0039564.1 MGP_WSBEiJ_G0021000.1 mouse_genomes_project 15 895499 941696 + Oxct1 protein_coding processed_transcript MGP_WSBEiJ_T0039565.1 MGP_WSBEiJ_G0021000.1 mouse_genomes_project 15 997489 1013076 + Oxct1 protein_coding processed_transcript MGP_WSBEiJ_T0039566.1 MGP_WSBEiJ_G0021000.1 mouse_genomes_project 15 997778 1013057 + Oxct1 protein_coding processed_transcript MGP_WSBEiJ_T0009925.1 MGP_WSBEiJ_G0008082.1 mouse_genomes_project 15 88518299 88518393 - Mir6393 miRNA miRNA MGP_WSBEiJ_T0041790.1 MGP_WSBEiJ_G0021698.1 mouse_genomes_project 15 103567393 103572761 - MGP_WSBEiJ_P0041790 Krt1 protein_coding protein_coding MGP_WSBEiJ_T0041559.1 MGP_WSBEiJ_G0021612.1 mouse_genomes_project 15 100041730 100056397 - MGP_WSBEiJ_P0041559 Rnd1 protein_coding protein_coding MGP_WSBEiJ_T0041560.1 MGP_WSBEiJ_G0021612.1 mouse_genomes_project 15 100047129 100056398 - MGP_WSBEiJ_P0041560 Rnd1 protein_coding protein_coding MGP_WSBEiJ_T0041561.1 MGP_WSBEiJ_G0021612.1 mouse_genomes_project 15 100050116 100056395 - MGP_WSBEiJ_P0041561 Rnd1 protein_coding protein_coding MGP_WSBEiJ_T0040424.1 MGP_WSBEiJ_G0021286.1 mouse_genomes_project 15 75723628 75730758 - MGP_WSBEiJ_P0040424 BC024139 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040425.1 MGP_WSBEiJ_G0021286.1 mouse_genomes_project 15 75723631 75730704 - MGP_WSBEiJ_P0040425 BC024139 protein_coding protein_coding MGP_WSBEiJ_T0040426.1 MGP_WSBEiJ_G0021286.1 mouse_genomes_project 15 75723632 75730718 - MGP_WSBEiJ_P0040426 BC024139 protein_coding protein_coding MGP_WSBEiJ_T0040427.1 MGP_WSBEiJ_G0021286.1 mouse_genomes_project 15 75726920 75730233 - BC024139 protein_coding processed_transcript MGP_WSBEiJ_T0016852.1 MGP_WSBEiJ_G0014711.1 mouse_genomes_project 15 16151672 16291180 - C030047K22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0039804.1 MGP_WSBEiJ_G0021068.1 mouse_genomes_project 15 24118358 24121680 + March11 protein_coding retained_intron MGP_WSBEiJ_T0039805.1 MGP_WSBEiJ_G0021068.1 mouse_genomes_project 15 24118374 24227140 + MGP_WSBEiJ_P0039805 March11 protein_coding protein_coding MGP_WSBEiJ_T0039806.1 MGP_WSBEiJ_G0021068.1 mouse_genomes_project 15 24118374 24227140 + MGP_WSBEiJ_P0039806 March11 protein_coding protein_coding MGP_WSBEiJ_T0039807.1 MGP_WSBEiJ_G0021068.1 mouse_genomes_project 15 24201187 24227140 + March11 protein_coding retained_intron MGP_WSBEiJ_T0097904.1 MGP_WSBEiJ_G0036567.1 mouse_genomes_project 15 59032105 59032212 + Gm25875 snRNA snRNA MGP_WSBEiJ_T0009897.1 MGP_WSBEiJ_G0008054.1 mouse_genomes_project 15 75829552 75829615 - Mir1942 miRNA miRNA MGP_WSBEiJ_T0009941.1 MGP_WSBEiJ_G0008098.1 mouse_genomes_project 15 104816468 104816560 + Mir615 miRNA miRNA MGP_WSBEiJ_T0012805.1 MGP_WSBEiJ_G0010935.1 mouse_genomes_project 15 84706080 84706365 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039667.1 MGP_WSBEiJ_G0021028.1 mouse_genomes_project 15 6252837 6376417 + protein_coding processed_transcript MGP_WSBEiJ_T0039668.1 MGP_WSBEiJ_G0021028.1 mouse_genomes_project 15 6322801 6372262 + protein_coding processed_transcript MGP_WSBEiJ_T0039669.1 MGP_WSBEiJ_G0021028.1 mouse_genomes_project 15 6322803 6372184 + protein_coding processed_transcript MGP_WSBEiJ_T0039670.1 MGP_WSBEiJ_G0021028.1 mouse_genomes_project 15 6322907 6382700 + MGP_WSBEiJ_P0039670 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039671.1 MGP_WSBEiJ_G0021028.1 mouse_genomes_project 15 6339214 6343976 + MGP_WSBEiJ_P0039671 protein_coding protein_coding MGP_WSBEiJ_T0041575.1 MGP_WSBEiJ_G0021621.1 mouse_genomes_project 15 100272904 100276532 - MGP_WSBEiJ_P0041575 Rhebl1 protein_coding protein_coding MGP_WSBEiJ_T0041576.1 MGP_WSBEiJ_G0021621.1 mouse_genomes_project 15 100273172 100276218 - Rhebl1 protein_coding processed_transcript MGP_WSBEiJ_T0041577.1 MGP_WSBEiJ_G0021621.1 mouse_genomes_project 15 100274659 100275874 - Rhebl1 protein_coding retained_intron MGP_WSBEiJ_T0041084.1 MGP_WSBEiJ_G0021466.1 mouse_genomes_project 15 83616389 83636816 - MGP_WSBEiJ_P0041084 Cyb5r3 protein_coding protein_coding MGP_WSBEiJ_T0041085.1 MGP_WSBEiJ_G0021466.1 mouse_genomes_project 15 83621614 83634730 - MGP_WSBEiJ_P0041085 Cyb5r3 protein_coding protein_coding MGP_WSBEiJ_T0041086.1 MGP_WSBEiJ_G0021466.1 mouse_genomes_project 15 83624981 83634399 - MGP_WSBEiJ_P0041086 Cyb5r3 protein_coding protein_coding MGP_WSBEiJ_T0003540.1 MGP_WSBEiJ_G0003213.1 mouse_genomes_project 15 79212983 79265099 + Gm10863 antisense antisense MGP_WSBEiJ_T0003541.1 MGP_WSBEiJ_G0003213.1 mouse_genomes_project 15 79213000 79264884 + Gm10863 antisense antisense MGP_WSBEiJ_T0003542.1 MGP_WSBEiJ_G0003213.1 mouse_genomes_project 15 79213008 79265213 + Gm10863 antisense antisense MGP_WSBEiJ_T0003543.1 MGP_WSBEiJ_G0003213.1 mouse_genomes_project 15 79213008 79276330 + Gm10863 antisense antisense MGP_WSBEiJ_T0003544.1 MGP_WSBEiJ_G0003213.1 mouse_genomes_project 15 79258028 79266099 + Gm10863 antisense antisense MGP_WSBEiJ_T0009919.1 MGP_WSBEiJ_G0008076.1 mouse_genomes_project 15 84006323 84006400 + Gm24575 miRNA miRNA MGP_WSBEiJ_T0012816.1 MGP_WSBEiJ_G0010946.1 mouse_genomes_project 15 101267843 101268137 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041783.1 MGP_WSBEiJ_G0021692.1 mouse_genomes_project 15 103424263 103430860 - MGP_WSBEiJ_P0041783 protein_coding protein_coding MGP_WSBEiJ_T0003558.1 MGP_WSBEiJ_G0003225.1 mouse_genomes_project 15 99961485 99962584 + Gm29331 antisense antisense MGP_WSBEiJ_T0040342.1 MGP_WSBEiJ_G0021260.1 mouse_genomes_project 15 74634566 74636557 + MGP_WSBEiJ_P0040342 protein_coding protein_coding MGP_WSBEiJ_T0039632.1 MGP_WSBEiJ_G0021020.1 mouse_genomes_project 15 5042376 5094146 + MGP_WSBEiJ_P0039632 Nup155 protein_coding protein_coding MGP_WSBEiJ_T0039970.1 MGP_WSBEiJ_G0021130.1 mouse_genomes_project 15 37892439 37991684 - MGP_WSBEiJ_P0039970 Dpys protein_coding protein_coding MGP_WSBEiJ_T0039971.1 MGP_WSBEiJ_G0021130.1 mouse_genomes_project 15 37908061 37991687 - MGP_WSBEiJ_P0039971 Dpys protein_coding protein_coding MGP_WSBEiJ_T0039972.1 MGP_WSBEiJ_G0021130.1 mouse_genomes_project 15 37908068 37919476 - MGP_WSBEiJ_P0039972 Dpys protein_coding protein_coding MGP_WSBEiJ_T0039973.1 MGP_WSBEiJ_G0021130.1 mouse_genomes_project 15 37990798 37991687 - Dpys protein_coding processed_transcript MGP_WSBEiJ_T0039904.1 MGP_WSBEiJ_G0021109.1 mouse_genomes_project 15 34641987 34697479 - MGP_WSBEiJ_P0039904 Snx31 protein_coding protein_coding MGP_WSBEiJ_T0039905.1 MGP_WSBEiJ_G0021109.1 mouse_genomes_project 15 34642337 34697474 - MGP_WSBEiJ_P0039905 Snx31 protein_coding protein_coding MGP_WSBEiJ_T0039906.1 MGP_WSBEiJ_G0021109.1 mouse_genomes_project 15 34679198 34687358 - Snx31 protein_coding processed_transcript MGP_WSBEiJ_T0039907.1 MGP_WSBEiJ_G0021109.1 mouse_genomes_project 15 34679198 34687856 - MGP_WSBEiJ_P0039907 Snx31 protein_coding protein_coding MGP_WSBEiJ_T0041699.1 MGP_WSBEiJ_G0021665.1 mouse_genomes_project 15 102074413 102122415 - MGP_WSBEiJ_P0041699 Tfcp2 protein_coding protein_coding MGP_WSBEiJ_T0012788.1 MGP_WSBEiJ_G0010918.1 mouse_genomes_project 15 61232860 61233972 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040013.1 MGP_WSBEiJ_G0021149.1 mouse_genomes_project 15 49210503 49459888 - MGP_WSBEiJ_P0040013 Trps1 protein_coding protein_coding MGP_WSBEiJ_T0040014.1 MGP_WSBEiJ_G0021149.1 mouse_genomes_project 15 49214162 49459910 - MGP_WSBEiJ_P0040014 Trps1 protein_coding protein_coding MGP_WSBEiJ_T0040015.1 MGP_WSBEiJ_G0021149.1 mouse_genomes_project 15 49214180 49459246 - MGP_WSBEiJ_P0040015 Trps1 protein_coding protein_coding MGP_WSBEiJ_T0040016.1 MGP_WSBEiJ_G0021149.1 mouse_genomes_project 15 49216184 49459243 - MGP_WSBEiJ_P0040016 Trps1 protein_coding protein_coding MGP_WSBEiJ_T0040017.1 MGP_WSBEiJ_G0021149.1 mouse_genomes_project 15 49216185 49452464 - MGP_WSBEiJ_P0040017 Trps1 protein_coding protein_coding MGP_WSBEiJ_T0040018.1 MGP_WSBEiJ_G0021149.1 mouse_genomes_project 15 49216201 49460228 - MGP_WSBEiJ_P0040018 Trps1 protein_coding protein_coding MGP_WSBEiJ_T0040019.1 MGP_WSBEiJ_G0021149.1 mouse_genomes_project 15 49383463 49391474 - MGP_WSBEiJ_P0040019 Trps1 protein_coding protein_coding MGP_WSBEiJ_T0040020.1 MGP_WSBEiJ_G0021149.1 mouse_genomes_project 15 49411116 49460650 - MGP_WSBEiJ_P0040020 Trps1 protein_coding protein_coding MGP_WSBEiJ_T0006715.1 MGP_WSBEiJ_G0005537.1 mouse_genomes_project 15 104230178 104260843 - Gm26518 lincRNA lincRNA MGP_WSBEiJ_T0096970.1 MGP_WSBEiJ_G0035651.1 mouse_genomes_project 15 37263947 37264055 - n-R5s39 rRNA rRNA MGP_WSBEiJ_T0040541.1 MGP_WSBEiJ_G0021307.1 mouse_genomes_project 15 76187219 76190233 - MGP_WSBEiJ_P0040541 Fbxl6 protein_coding protein_coding MGP_WSBEiJ_T0040347.1 MGP_WSBEiJ_G0021263.1 mouse_genomes_project 15 75123625 75140905 - MGP_WSBEiJ_P0040347 Ly6h protein_coding protein_coding MGP_WSBEiJ_T0040348.1 MGP_WSBEiJ_G0021263.1 mouse_genomes_project 15 75127277 75140905 - MGP_WSBEiJ_P0040348 Ly6h protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040349.1 MGP_WSBEiJ_G0021263.1 mouse_genomes_project 15 75139003 75141512 - MGP_WSBEiJ_P0040349 Ly6h protein_coding protein_coding MGP_WSBEiJ_T0040350.1 MGP_WSBEiJ_G0021263.1 mouse_genomes_project 15 75139004 75141113 - MGP_WSBEiJ_P0040350 Ly6h protein_coding protein_coding MGP_WSBEiJ_T0040351.1 MGP_WSBEiJ_G0021263.1 mouse_genomes_project 15 75139006 75140914 - MGP_WSBEiJ_P0040351 Ly6h protein_coding protein_coding MGP_WSBEiJ_T0040352.1 MGP_WSBEiJ_G0021263.1 mouse_genomes_project 15 75139285 75141473 - MGP_WSBEiJ_P0040352 Ly6h protein_coding protein_coding MGP_WSBEiJ_T0040353.1 MGP_WSBEiJ_G0021263.1 mouse_genomes_project 15 75139472 75140889 - Ly6h protein_coding retained_intron MGP_WSBEiJ_T0040245.1 MGP_WSBEiJ_G0021228.1 mouse_genomes_project 15 72383029 72386697 + MGP_WSBEiJ_P0040245 Chrac1 protein_coding protein_coding MGP_WSBEiJ_T0040246.1 MGP_WSBEiJ_G0021228.1 mouse_genomes_project 15 72383029 72390168 + MGP_WSBEiJ_P0040246 Chrac1 protein_coding protein_coding MGP_WSBEiJ_T0040247.1 MGP_WSBEiJ_G0021228.1 mouse_genomes_project 15 72383049 72387396 + Chrac1 protein_coding retained_intron MGP_WSBEiJ_T0039985.1 MGP_WSBEiJ_G0021135.1 mouse_genomes_project 15 40112892 40117305 - MGP_WSBEiJ_P0039985 Abra protein_coding protein_coding MGP_WSBEiJ_T0041763.1 MGP_WSBEiJ_G0021677.1 mouse_genomes_project 15 102805929 102847747 + MGP_WSBEiJ_P0041763 Acvr1b protein_coding protein_coding MGP_WSBEiJ_T0041106.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84281412 84297329 + MGP_WSBEiJ_P0041106 Mpped1 protein_coding protein_coding MGP_WSBEiJ_T0041107.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84294036 84370662 + MGP_WSBEiJ_P0041107 Mpped1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041108.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84297136 84368482 + MGP_WSBEiJ_P0041108 Mpped1 protein_coding protein_coding MGP_WSBEiJ_T0041109.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84297211 84368578 + MGP_WSBEiJ_P0041109 Mpped1 protein_coding protein_coding MGP_WSBEiJ_T0041110.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84297232 84370656 + MGP_WSBEiJ_P0041110 Mpped1 protein_coding protein_coding MGP_WSBEiJ_T0041111.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84302783 84364299 + MGP_WSBEiJ_P0041111 Mpped1 protein_coding protein_coding MGP_WSBEiJ_T0041112.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84306225 84368463 + MGP_WSBEiJ_P0041112 Mpped1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041113.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84345588 84368483 + MGP_WSBEiJ_P0041113 Mpped1 protein_coding protein_coding MGP_WSBEiJ_T0041114.1 MGP_WSBEiJ_G0021476.1 mouse_genomes_project 15 84345621 84366691 + MGP_WSBEiJ_P0041114 Mpped1 protein_coding protein_coding MGP_WSBEiJ_T0040705.1 MGP_WSBEiJ_G0021361.1 mouse_genomes_project 15 78673329 78722743 - MGP_WSBEiJ_P0040705 Elfn2 protein_coding protein_coding MGP_WSBEiJ_T0040706.1 MGP_WSBEiJ_G0021362.1 mouse_genomes_project 15 78759211 78777726 - MGP_WSBEiJ_P0040706 Mfng protein_coding protein_coding MGP_WSBEiJ_T0040707.1 MGP_WSBEiJ_G0021362.1 mouse_genomes_project 15 78763771 78771434 - Mfng protein_coding retained_intron MGP_WSBEiJ_T0040708.1 MGP_WSBEiJ_G0021362.1 mouse_genomes_project 15 78768151 78771408 - Mfng protein_coding retained_intron MGP_WSBEiJ_T0040709.1 MGP_WSBEiJ_G0021362.1 mouse_genomes_project 15 78771125 78776147 - Mfng protein_coding processed_transcript MGP_WSBEiJ_T0041223.1 MGP_WSBEiJ_G0021515.1 mouse_genomes_project 15 89619798 89626827 + MGP_WSBEiJ_P0041223 Creld2 protein_coding protein_coding MGP_WSBEiJ_T0003548.1 MGP_WSBEiJ_G0003217.1 mouse_genomes_project 15 83558730 83562582 - Gm17206 antisense antisense MGP_WSBEiJ_T0040683.1 MGP_WSBEiJ_G0021352.1 mouse_genomes_project 15 78381747 78388030 - MGP_WSBEiJ_P0040683 Tst protein_coding protein_coding MGP_WSBEiJ_T0009935.1 MGP_WSBEiJ_G0008092.1 mouse_genomes_project 15 103264839 103264977 + Gm44393 miRNA miRNA MGP_WSBEiJ_T0003539.1 MGP_WSBEiJ_G0003212.1 mouse_genomes_project 15 78931166 78932877 - 1700027A07Rik antisense antisense MGP_WSBEiJ_T0009917.1 MGP_WSBEiJ_G0008074.1 mouse_genomes_project 15 83190977 83191037 - Gm27618 miRNA miRNA MGP_WSBEiJ_T0040994.1 MGP_WSBEiJ_G0021435.1 mouse_genomes_project 15 82191972 82204983 - MGP_WSBEiJ_P0040994 Polr3h protein_coding protein_coding MGP_WSBEiJ_T0016880.1 MGP_WSBEiJ_G0014726.1 mouse_genomes_project 15 81395047 81397027 + 4930483J18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016881.1 MGP_WSBEiJ_G0014726.1 mouse_genomes_project 15 81395126 81397020 + 4930483J18Rik processed_transcript processed_transcript MGP_WSBEiJ_T0041507.1 MGP_WSBEiJ_G0021591.1 mouse_genomes_project 15 99398419 99437782 + MGP_WSBEiJ_P0041507 Pfkm protein_coding protein_coding MGP_WSBEiJ_T0040196.1 MGP_WSBEiJ_G0021216.1 mouse_genomes_project 15 65695061 65766663 + MGP_WSBEiJ_P0040196 Phf20l1 protein_coding protein_coding MGP_WSBEiJ_T0040170.1 MGP_WSBEiJ_G0021207.1 mouse_genomes_project 15 63805507 64037995 - MGP_WSBEiJ_P0040170 Adcy8 protein_coding protein_coding MGP_WSBEiJ_T0040892.1 MGP_WSBEiJ_G0021411.1 mouse_genomes_project 15 80618630 80736071 - MGP_WSBEiJ_P0040892 Enthd1 protein_coding protein_coding MGP_WSBEiJ_T0006707.1 MGP_WSBEiJ_G0005530.1 mouse_genomes_project 15 100199515 100210053 + B130046B21Rik lincRNA lincRNA MGP_WSBEiJ_T0039829.1 MGP_WSBEiJ_G0021079.1 mouse_genomes_project 15 29411947 29426721 - MGP_WSBEiJ_P0039829 Ropn1l protein_coding protein_coding MGP_WSBEiJ_T0040764.1 MGP_WSBEiJ_G0021377.1 mouse_genomes_project 15 79187802 79198721 + MGP_WSBEiJ_P0040764 Polr2f protein_coding protein_coding MGP_WSBEiJ_T0040373.1 MGP_WSBEiJ_G0021271.1 mouse_genomes_project 15 75475747 75480378 - MGP_WSBEiJ_P0040373 Mroh6 protein_coding protein_coding MGP_WSBEiJ_T0039974.1 MGP_WSBEiJ_G0021131.1 mouse_genomes_project 15 38006941 38088875 - MGP_WSBEiJ_P0039974 Lrp12 protein_coding protein_coding MGP_WSBEiJ_T0039975.1 MGP_WSBEiJ_G0021131.1 mouse_genomes_project 15 38006941 38088669 - MGP_WSBEiJ_P0039975 Lrp12 protein_coding protein_coding MGP_WSBEiJ_T0039976.1 MGP_WSBEiJ_G0021131.1 mouse_genomes_project 15 38044042 38088587 - Lrp12 protein_coding retained_intron MGP_WSBEiJ_T0041050.1 MGP_WSBEiJ_G0021455.1 mouse_genomes_project 15 82810827 82818158 + MGP_WSBEiJ_P0041050 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0006714.1 MGP_WSBEiJ_G0005536.1 mouse_genomes_project 15 104025386 104028952 + lincRNA lincRNA MGP_WSBEiJ_T0039787.1 MGP_WSBEiJ_G0021064.1 mouse_genomes_project 15 23200628 23201238 + MGP_WSBEiJ_P0039787 Gm5468 protein_coding protein_coding MGP_WSBEiJ_T0041211.1 MGP_WSBEiJ_G0021511.1 mouse_genomes_project 15 89378979 89380348 + MGP_WSBEiJ_P0041211 Zdhhc25 protein_coding protein_coding MGP_WSBEiJ_T0006667.1 MGP_WSBEiJ_G0005508.1 mouse_genomes_project 15 53674465 53686861 + Gm26684 lincRNA lincRNA MGP_WSBEiJ_T0000911.1 MGP_WSBEiJ_G0000849.1 mouse_genomes_project 15 67471183 67476130 - TEC TEC MGP_WSBEiJ_T0100577.1 MGP_WSBEiJ_G0039035.1 mouse_genomes_project 15 74321756 74322609 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012761.1 MGP_WSBEiJ_G0010891.1 mouse_genomes_project 15 5501455 5501755 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041796.1 MGP_WSBEiJ_G0021704.1 mouse_genomes_project 15 103725492 103735625 - MGP_WSBEiJ_P0041796 Krt8 protein_coding protein_coding MGP_WSBEiJ_T0097895.1 MGP_WSBEiJ_G0036558.1 mouse_genomes_project 15 43231804 43231897 + Gm24768 snRNA snRNA MGP_WSBEiJ_T0006668.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61037763 61263227 + lincRNA lincRNA MGP_WSBEiJ_T0006669.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61037815 61274225 + lincRNA lincRNA MGP_WSBEiJ_T0006670.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61037824 61263223 + lincRNA lincRNA MGP_WSBEiJ_T0006671.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61037827 61401938 + lincRNA lincRNA MGP_WSBEiJ_T0006672.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61037838 61264670 + lincRNA lincRNA MGP_WSBEiJ_T0006673.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61039024 61262922 + lincRNA lincRNA MGP_WSBEiJ_T0006674.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61103746 61115046 + lincRNA lincRNA MGP_WSBEiJ_T0006675.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61193042 61264672 + lincRNA lincRNA MGP_WSBEiJ_T0006676.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61232862 61263225 + lincRNA lincRNA MGP_WSBEiJ_T0006677.1 MGP_WSBEiJ_G0005509.1 mouse_genomes_project 15 61237244 61256228 + lincRNA lincRNA MGP_WSBEiJ_T0039950.1 MGP_WSBEiJ_G0021121.1 mouse_genomes_project 15 36722502 36753376 - MGP_WSBEiJ_P0039950 Azin1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039951.1 MGP_WSBEiJ_G0021121.1 mouse_genomes_project 15 36724621 36753518 - MGP_WSBEiJ_P0039951 Azin1 protein_coding protein_coding MGP_WSBEiJ_T0039952.1 MGP_WSBEiJ_G0021121.1 mouse_genomes_project 15 36726935 36731676 - Azin1 protein_coding retained_intron MGP_WSBEiJ_T0039953.1 MGP_WSBEiJ_G0021121.1 mouse_genomes_project 15 36732937 36752369 - MGP_WSBEiJ_P0039953 Azin1 protein_coding protein_coding MGP_WSBEiJ_T0039954.1 MGP_WSBEiJ_G0021121.1 mouse_genomes_project 15 36734680 36752428 - MGP_WSBEiJ_P0039954 Azin1 protein_coding protein_coding MGP_WSBEiJ_T0039955.1 MGP_WSBEiJ_G0021121.1 mouse_genomes_project 15 36748682 36753457 - Azin1 protein_coding processed_transcript MGP_WSBEiJ_T0041797.1 MGP_WSBEiJ_G0021705.1 mouse_genomes_project 15 103763020 103766821 + MGP_WSBEiJ_P0041797 Krt18 protein_coding protein_coding MGP_WSBEiJ_T0097882.1 MGP_WSBEiJ_G0036545.1 mouse_genomes_project 15 452982 453108 - Gm22031 snRNA snRNA MGP_WSBEiJ_T0041186.1 MGP_WSBEiJ_G0021503.1 mouse_genomes_project 15 86466968 86498287 + MGP_WSBEiJ_P0041186 Ttc38 protein_coding protein_coding MGP_WSBEiJ_T0041187.1 MGP_WSBEiJ_G0021503.1 mouse_genomes_project 15 86467006 86497203 + Ttc38 protein_coding processed_transcript MGP_WSBEiJ_T0041188.1 MGP_WSBEiJ_G0021503.1 mouse_genomes_project 15 86467006 86481623 + MGP_WSBEiJ_P0041188 Ttc38 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040288.1 MGP_WSBEiJ_G0021238.1 mouse_genomes_project 15 73965971 73998391 - MGP_WSBEiJ_P0040288 Mroh4 protein_coding protein_coding MGP_WSBEiJ_T0040289.1 MGP_WSBEiJ_G0021238.1 mouse_genomes_project 15 73965971 73996891 - MGP_WSBEiJ_P0040289 Mroh4 protein_coding protein_coding MGP_WSBEiJ_T0040290.1 MGP_WSBEiJ_G0021238.1 mouse_genomes_project 15 73966345 73971955 - MGP_WSBEiJ_P0040290 Mroh4 protein_coding protein_coding MGP_WSBEiJ_T0040291.1 MGP_WSBEiJ_G0021238.1 mouse_genomes_project 15 73966357 73968171 - Mroh4 protein_coding retained_intron MGP_WSBEiJ_T0040292.1 MGP_WSBEiJ_G0021238.1 mouse_genomes_project 15 73976090 73989171 - MGP_WSBEiJ_P0040292 Mroh4 protein_coding protein_coding MGP_WSBEiJ_T0040293.1 MGP_WSBEiJ_G0021238.1 mouse_genomes_project 15 73992407 73998336 - Mroh4 protein_coding processed_transcript MGP_WSBEiJ_T0041685.1 MGP_WSBEiJ_G0021660.1 mouse_genomes_project 15 101819536 101827958 + MGP_WSBEiJ_P0041685 protein_coding protein_coding MGP_WSBEiJ_T0011186.1 MGP_WSBEiJ_G0009343.1 mouse_genomes_project 15 41475877 41476173 - Gm22037 misc_RNA misc_RNA MGP_WSBEiJ_T0040197.1 MGP_WSBEiJ_G0021217.1 mouse_genomes_project 15 65788621 65971717 + MGP_WSBEiJ_P0040197 Tg protein_coding protein_coding MGP_WSBEiJ_T0040198.1 MGP_WSBEiJ_G0021217.1 mouse_genomes_project 15 65806491 65971603 + MGP_WSBEiJ_P0040198 Tg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040199.1 MGP_WSBEiJ_G0021217.1 mouse_genomes_project 15 65818897 65833162 + Tg protein_coding processed_transcript MGP_WSBEiJ_T0040200.1 MGP_WSBEiJ_G0021217.1 mouse_genomes_project 15 65822890 65971603 + MGP_WSBEiJ_P0040200 Tg protein_coding protein_coding MGP_WSBEiJ_T0040201.1 MGP_WSBEiJ_G0021217.1 mouse_genomes_project 15 65833915 65843270 + Tg protein_coding processed_transcript MGP_WSBEiJ_T0040202.1 MGP_WSBEiJ_G0021217.1 mouse_genomes_project 15 65834557 65847653 + Tg protein_coding processed_transcript MGP_WSBEiJ_T0040203.1 MGP_WSBEiJ_G0021217.1 mouse_genomes_project 15 65855496 65971717 + MGP_WSBEiJ_P0040203 Tg protein_coding protein_coding MGP_WSBEiJ_T0040209.1 MGP_WSBEiJ_G0021217.1 mouse_genomes_project 15 65918198 65971717 + Tg protein_coding processed_transcript MGP_WSBEiJ_T0039819.1 MGP_WSBEiJ_G0021076.1 mouse_genomes_project 15 29184250 29233855 + MGP_WSBEiJ_P0039819 Dap protein_coding protein_coding MGP_WSBEiJ_T0039820.1 MGP_WSBEiJ_G0021076.1 mouse_genomes_project 15 29184324 29234910 + MGP_WSBEiJ_P0039820 Dap protein_coding protein_coding MGP_WSBEiJ_T0039821.1 MGP_WSBEiJ_G0021076.1 mouse_genomes_project 15 29184355 29234028 + MGP_WSBEiJ_P0039821 Dap protein_coding protein_coding MGP_WSBEiJ_T0039822.1 MGP_WSBEiJ_G0021076.1 mouse_genomes_project 15 29228881 29233953 + MGP_WSBEiJ_P0039822 Dap protein_coding protein_coding MGP_WSBEiJ_T0040151.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63186976 63422243 - MGP_WSBEiJ_P0040151 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040152.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63188656 63422209 - MGP_WSBEiJ_P0040152 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040153.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63188659 63499852 - MGP_WSBEiJ_P0040153 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040154.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63188661 63499852 - MGP_WSBEiJ_P0040154 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040155.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63188661 63499689 - MGP_WSBEiJ_P0040155 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040156.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63188661 63499852 - MGP_WSBEiJ_P0040156 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040157.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63188661 63465379 - MGP_WSBEiJ_P0040157 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040158.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63188661 63499852 - MGP_WSBEiJ_P0040158 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040159.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63188739 63499670 - MGP_WSBEiJ_P0040159 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040160.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63189566 63465379 - MGP_WSBEiJ_P0040160 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040161.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63189566 63465379 - MGP_WSBEiJ_P0040161 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040162.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63194183 63204215 - Asap1 protein_coding retained_intron MGP_WSBEiJ_T0040163.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63221669 63224401 - Asap1 protein_coding processed_transcript MGP_WSBEiJ_T0040164.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63221722 63225436 - Asap1 protein_coding retained_intron MGP_WSBEiJ_T0040165.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63265640 63316210 - MGP_WSBEiJ_P0040165 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0040166.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63279841 63499665 - Asap1 protein_coding processed_transcript MGP_WSBEiJ_T0040167.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63298645 63422243 - Asap1 protein_coding retained_intron MGP_WSBEiJ_T0040168.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63299139 63421259 - Asap1 protein_coding processed_transcript MGP_WSBEiJ_T0040169.1 MGP_WSBEiJ_G0021206.1 mouse_genomes_project 15 63316215 63424152 - MGP_WSBEiJ_P0040169 Asap1 protein_coding protein_coding MGP_WSBEiJ_T0041332.1 MGP_WSBEiJ_G0021542.1 mouse_genomes_project 15 90268932 90270167 + MGP_WSBEiJ_P0041332 C730034F03Rik protein_coding protein_coding MGP_WSBEiJ_T0097930.1 MGP_WSBEiJ_G0036593.1 mouse_genomes_project 15 104137048 104137152 + Gm23590 snRNA snRNA MGP_WSBEiJ_T0039847.1 MGP_WSBEiJ_G0021088.1 mouse_genomes_project 15 31732984 31736986 - MGP_WSBEiJ_P0039847 Tspyl5 protein_coding protein_coding MGP_WSBEiJ_T0099169.1 MGP_WSBEiJ_G0037832.1 mouse_genomes_project 15 75345209 75345340 + Gm23747 snoRNA snoRNA MGP_WSBEiJ_T0040364.1 MGP_WSBEiJ_G0021267.1 mouse_genomes_project 15 75286780 75296890 + MGP_WSBEiJ_P0040364 Rhpn1 protein_coding protein_coding MGP_WSBEiJ_T0040365.1 MGP_WSBEiJ_G0021267.1 mouse_genomes_project 15 75286808 75296892 + Rhpn1 protein_coding retained_intron MGP_WSBEiJ_T0040366.1 MGP_WSBEiJ_G0021267.1 mouse_genomes_project 15 75286818 75296887 + Rhpn1 protein_coding retained_intron MGP_WSBEiJ_T0040367.1 MGP_WSBEiJ_G0021267.1 mouse_genomes_project 15 75286829 75296890 + MGP_WSBEiJ_P0040367 Rhpn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040368.1 MGP_WSBEiJ_G0021267.1 mouse_genomes_project 15 75286894 75296707 + MGP_WSBEiJ_P0040368 Rhpn1 protein_coding protein_coding MGP_WSBEiJ_T0040241.1 MGP_WSBEiJ_G0021227.1 mouse_genomes_project 15 71848916 72360404 - MGP_WSBEiJ_P0040241 Trappc9 protein_coding protein_coding MGP_WSBEiJ_T0040242.1 MGP_WSBEiJ_G0021227.1 mouse_genomes_project 15 71848916 72354990 - MGP_WSBEiJ_P0040242 Trappc9 protein_coding protein_coding MGP_WSBEiJ_T0040243.1 MGP_WSBEiJ_G0021227.1 mouse_genomes_project 15 72074323 72360404 - MGP_WSBEiJ_P0040243 Trappc9 protein_coding protein_coding MGP_WSBEiJ_T0040244.1 MGP_WSBEiJ_G0021227.1 mouse_genomes_project 15 72128076 72360404 - MGP_WSBEiJ_P0040244 Trappc9 protein_coding protein_coding MGP_WSBEiJ_T0100023.1 MGP_WSBEiJ_G0038657.1 mouse_genomes_project 15 58211479 58216537 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100024.1 MGP_WSBEiJ_G0038657.1 mouse_genomes_project 15 58215378 58216454 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0041827.1 MGP_WSBEiJ_G0021716.1 mouse_genomes_project 15 104054061 104084082 + MGP_WSBEiJ_P0041827 Espl1 protein_coding protein_coding MGP_WSBEiJ_T0040885.1 MGP_WSBEiJ_G0021410.1 mouse_genomes_project 15 80439748 80561393 + MGP_WSBEiJ_P0040885 Cacna1i protein_coding protein_coding MGP_WSBEiJ_T0040886.1 MGP_WSBEiJ_G0021410.1 mouse_genomes_project 15 80440044 80558876 + MGP_WSBEiJ_P0040886 Cacna1i protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040887.1 MGP_WSBEiJ_G0021410.1 mouse_genomes_project 15 80441267 80561403 + MGP_WSBEiJ_P0040887 Cacna1i protein_coding unknown_likely_coding MGP_WSBEiJ_T0040888.1 MGP_WSBEiJ_G0021410.1 mouse_genomes_project 15 80552394 80553984 + MGP_WSBEiJ_P0040888 Cacna1i protein_coding protein_coding MGP_WSBEiJ_T0040889.1 MGP_WSBEiJ_G0021410.1 mouse_genomes_project 15 80552394 80553984 + MGP_WSBEiJ_P0040889 Cacna1i protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040890.1 MGP_WSBEiJ_G0021410.1 mouse_genomes_project 15 80552394 80556944 + MGP_WSBEiJ_P0040890 Cacna1i protein_coding protein_coding MGP_WSBEiJ_T0040891.1 MGP_WSBEiJ_G0021410.1 mouse_genomes_project 15 80552394 80553984 + MGP_WSBEiJ_P0040891 Cacna1i protein_coding protein_coding MGP_WSBEiJ_T0003568.1 MGP_WSBEiJ_G0003234.1 mouse_genomes_project 15 102279583 102290270 + Galnt6os antisense antisense MGP_WSBEiJ_T0040883.1 MGP_WSBEiJ_G0021408.1 mouse_genomes_project 15 80402473 80404830 + MGP_WSBEiJ_P0040883 Atf4 protein_coding protein_coding MGP_WSBEiJ_T0041058.1 MGP_WSBEiJ_G0021462.1 mouse_genomes_project 15 83445292 83469785 - MGP_WSBEiJ_P0041058 Nfam1 protein_coding protein_coding MGP_WSBEiJ_T0041059.1 MGP_WSBEiJ_G0021462.1 mouse_genomes_project 15 83447307 83480204 - MGP_WSBEiJ_P0041059 Nfam1 protein_coding protein_coding MGP_WSBEiJ_T0041237.1 MGP_WSBEiJ_G0021520.1 mouse_genomes_project 15 89866189 89877497 + MGP_WSBEiJ_P0041237 Panx2 protein_coding protein_coding MGP_WSBEiJ_T0041238.1 MGP_WSBEiJ_G0021520.1 mouse_genomes_project 15 89866202 89878526 + MGP_WSBEiJ_P0041238 Panx2 protein_coding protein_coding MGP_WSBEiJ_T0041239.1 MGP_WSBEiJ_G0021520.1 mouse_genomes_project 15 89877291 89881144 + MGP_WSBEiJ_P0041239 Panx2 protein_coding protein_coding MGP_WSBEiJ_T0039675.1 MGP_WSBEiJ_G0021031.1 mouse_genomes_project 15 6562807 6587374 - MGP_WSBEiJ_P0039675 Il7r protein_coding protein_coding MGP_WSBEiJ_T0012790.1 MGP_WSBEiJ_G0010920.1 mouse_genomes_project 15 64135712 64136024 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041164.1 MGP_WSBEiJ_G0021494.1 mouse_genomes_project 15 85651709 85717158 - MGP_WSBEiJ_P0041164 Smc1b protein_coding protein_coding MGP_WSBEiJ_T0040837.1 MGP_WSBEiJ_G0021397.1 mouse_genomes_project 15 79885765 79905096 - MGP_WSBEiJ_P0040837 Nptxr protein_coding protein_coding MGP_WSBEiJ_T0040838.1 MGP_WSBEiJ_G0021397.1 mouse_genomes_project 15 79885766 79905153 - MGP_WSBEiJ_P0040838 Nptxr protein_coding protein_coding MGP_WSBEiJ_T0040839.1 MGP_WSBEiJ_G0021397.1 mouse_genomes_project 15 79888649 79890385 - Nptxr protein_coding processed_transcript MGP_WSBEiJ_T0012794.1 MGP_WSBEiJ_G0010924.1 mouse_genomes_project 15 75337430 75427053 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040893.1 MGP_WSBEiJ_G0021412.1 mouse_genomes_project 15 80802139 80831091 + MGP_WSBEiJ_P0040893 Grap2 protein_coding protein_coding MGP_WSBEiJ_T0040249.1 MGP_WSBEiJ_G0021230.1 mouse_genomes_project 15 72502108 72731654 - MGP_WSBEiJ_P0040249 Ptk2 protein_coding protein_coding MGP_WSBEiJ_T0040250.1 MGP_WSBEiJ_G0021230.1 mouse_genomes_project 15 72514386 72667384 - MGP_WSBEiJ_P0040250 Ptk2 protein_coding protein_coding MGP_WSBEiJ_T0041362.1 MGP_WSBEiJ_G0021551.1 mouse_genomes_project 15 91850791 91978662 - MGP_WSBEiJ_P0041362 Kif21a protein_coding protein_coding MGP_WSBEiJ_T0041363.1 MGP_WSBEiJ_G0021551.1 mouse_genomes_project 15 91850791 91978662 - MGP_WSBEiJ_P0041363 Kif21a protein_coding protein_coding MGP_WSBEiJ_T0041364.1 MGP_WSBEiJ_G0021551.1 mouse_genomes_project 15 91850791 91978662 - MGP_WSBEiJ_P0041364 Kif21a protein_coding protein_coding MGP_WSBEiJ_T0041365.1 MGP_WSBEiJ_G0021551.1 mouse_genomes_project 15 91850791 91978662 - MGP_WSBEiJ_P0041365 Kif21a protein_coding protein_coding MGP_WSBEiJ_T0041366.1 MGP_WSBEiJ_G0021551.1 mouse_genomes_project 15 91850791 91978662 - MGP_WSBEiJ_P0041366 Kif21a protein_coding protein_coding MGP_WSBEiJ_T0041367.1 MGP_WSBEiJ_G0021551.1 mouse_genomes_project 15 91850793 91978416 - MGP_WSBEiJ_P0041367 Kif21a protein_coding unknown_likely_coding MGP_WSBEiJ_T0040823.1 MGP_WSBEiJ_G0021394.1 mouse_genomes_project 15 79787946 79813289 + MGP_WSBEiJ_P0040823 Gtpbp1 protein_coding protein_coding MGP_WSBEiJ_T0041818.1 MGP_WSBEiJ_G0021713.1 mouse_genomes_project 15 103966465 103982352 - MGP_WSBEiJ_P0041818 Itgb7 protein_coding protein_coding MGP_WSBEiJ_T0041819.1 MGP_WSBEiJ_G0021713.1 mouse_genomes_project 15 103975174 103982352 - MGP_WSBEiJ_P0041819 Itgb7 protein_coding protein_coding MGP_WSBEiJ_T0040091.1 MGP_WSBEiJ_G0021177.1 mouse_genomes_project 15 56813104 56842444 + MGP_WSBEiJ_P0040091 Fam83a protein_coding protein_coding MGP_WSBEiJ_T0040092.1 MGP_WSBEiJ_G0021177.1 mouse_genomes_project 15 56813595 56823184 + MGP_WSBEiJ_P0040092 Fam83a protein_coding protein_coding MGP_WSBEiJ_T0040093.1 MGP_WSBEiJ_G0021177.1 mouse_genomes_project 15 56829430 56837669 + Fam83a protein_coding processed_transcript MGP_WSBEiJ_T0041096.1 MGP_WSBEiJ_G0021472.1 mouse_genomes_project 15 84036469 84045388 - MGP_WSBEiJ_P0041096 Mcat protein_coding protein_coding MGP_WSBEiJ_T0041038.1 MGP_WSBEiJ_G0021450.1 mouse_genomes_project 15 82657345 82667943 - MGP_WSBEiJ_P0041038 Naga protein_coding protein_coding MGP_WSBEiJ_T0040030.1 MGP_WSBEiJ_G0021156.1 mouse_genomes_project 15 51737733 52031595 - MGP_WSBEiJ_P0040030 Ext1 protein_coding protein_coding MGP_WSBEiJ_T0040031.1 MGP_WSBEiJ_G0021156.1 mouse_genomes_project 15 51742360 52031095 - MGP_WSBEiJ_P0040031 Ext1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040032.1 MGP_WSBEiJ_G0021156.1 mouse_genomes_project 15 51756640 51875276 - MGP_WSBEiJ_P0040032 Ext1 protein_coding protein_coding MGP_WSBEiJ_T0040033.1 MGP_WSBEiJ_G0021156.1 mouse_genomes_project 15 51762954 51783148 - Ext1 protein_coding retained_intron MGP_WSBEiJ_T0041037.1 MGP_WSBEiJ_G0021449.1 mouse_genomes_project 15 82621004 82640323 + MGP_WSBEiJ_P0041037 Wbp2nl protein_coding protein_coding MGP_WSBEiJ_T0003566.1 MGP_WSBEiJ_G0003232.1 mouse_genomes_project 15 102157927 102163966 + Gm20680 antisense antisense MGP_WSBEiJ_T0040410.1 MGP_WSBEiJ_G0021282.1 mouse_genomes_project 15 75605131 75638430 + MGP_WSBEiJ_P0040410 protein_coding protein_coding MGP_WSBEiJ_T0040411.1 MGP_WSBEiJ_G0021282.1 mouse_genomes_project 15 75609836 75637909 + MGP_WSBEiJ_P0040411 protein_coding protein_coding MGP_WSBEiJ_T0040412.1 MGP_WSBEiJ_G0021282.1 mouse_genomes_project 15 75637442 75640979 + protein_coding processed_transcript MGP_WSBEiJ_T0040413.1 MGP_WSBEiJ_G0021282.1 mouse_genomes_project 15 75638141 75649233 + protein_coding processed_transcript MGP_WSBEiJ_T0040414.1 MGP_WSBEiJ_G0021282.1 mouse_genomes_project 15 75639780 75641040 + protein_coding retained_intron MGP_WSBEiJ_T0041553.1 MGP_WSBEiJ_G0021611.1 mouse_genomes_project 15 100021332 100040437 - MGP_WSBEiJ_P0041553 Ddx23 protein_coding protein_coding MGP_WSBEiJ_T0041554.1 MGP_WSBEiJ_G0021611.1 mouse_genomes_project 15 100024173 100040432 - Ddx23 protein_coding retained_intron MGP_WSBEiJ_T0041555.1 MGP_WSBEiJ_G0021611.1 mouse_genomes_project 15 100024186 100040429 - Ddx23 protein_coding retained_intron MGP_WSBEiJ_T0041556.1 MGP_WSBEiJ_G0021611.1 mouse_genomes_project 15 100029762 100040432 - Ddx23 protein_coding retained_intron MGP_WSBEiJ_T0041557.1 MGP_WSBEiJ_G0021611.1 mouse_genomes_project 15 100034234 100040406 - MGP_WSBEiJ_P0041557 Ddx23 protein_coding protein_coding MGP_WSBEiJ_T0041558.1 MGP_WSBEiJ_G0021611.1 mouse_genomes_project 15 100035452 100040437 - Ddx23 protein_coding retained_intron MGP_WSBEiJ_T0040862.1 MGP_WSBEiJ_G0021401.1 mouse_genomes_project 15 80032475 80050358 - MGP_WSBEiJ_P0040862 Cbx7 protein_coding protein_coding MGP_WSBEiJ_T0040863.1 MGP_WSBEiJ_G0021401.1 mouse_genomes_project 15 80032478 80050487 - Cbx7 protein_coding retained_intron MGP_WSBEiJ_T0040864.1 MGP_WSBEiJ_G0021401.1 mouse_genomes_project 15 80034817 80051618 - MGP_WSBEiJ_P0040864 Cbx7 protein_coding protein_coding MGP_WSBEiJ_T0040865.1 MGP_WSBEiJ_G0021401.1 mouse_genomes_project 15 80034988 80050235 - MGP_WSBEiJ_P0040865 Cbx7 protein_coding protein_coding MGP_WSBEiJ_T0040866.1 MGP_WSBEiJ_G0021401.1 mouse_genomes_project 15 80035086 80090372 - MGP_WSBEiJ_P0040866 Cbx7 protein_coding protein_coding MGP_WSBEiJ_T0040867.1 MGP_WSBEiJ_G0021401.1 mouse_genomes_project 15 80035590 80050235 - MGP_WSBEiJ_P0040867 Cbx7 protein_coding protein_coding MGP_WSBEiJ_T0040868.1 MGP_WSBEiJ_G0021401.1 mouse_genomes_project 15 80048312 80051549 - Cbx7 protein_coding retained_intron MGP_WSBEiJ_T0099135.1 MGP_WSBEiJ_G0037798.1 mouse_genomes_project 15 3014421 3014553 - Gm23139 snoRNA snoRNA MGP_WSBEiJ_T0097912.1 MGP_WSBEiJ_G0036575.1 mouse_genomes_project 15 75828041 75828146 - Gm25720 snRNA snRNA MGP_WSBEiJ_T0040214.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66052366 66093438 - MGP_WSBEiJ_P0040214 Ndrg1 protein_coding protein_coding MGP_WSBEiJ_T0040215.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66053911 66057515 - Ndrg1 protein_coding retained_intron MGP_WSBEiJ_T0040216.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66054122 66093437 - MGP_WSBEiJ_P0040216 Ndrg1 protein_coding protein_coding MGP_WSBEiJ_T0040217.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66057203 66093437 - Ndrg1 protein_coding retained_intron MGP_WSBEiJ_T0040218.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66065057 66093437 - MGP_WSBEiJ_P0040218 Ndrg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040219.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66066119 66093437 - MGP_WSBEiJ_P0040219 Ndrg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040220.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66066124 66091723 - MGP_WSBEiJ_P0040220 Ndrg1 protein_coding protein_coding MGP_WSBEiJ_T0040221.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66066124 66071525 - MGP_WSBEiJ_P0040221 Ndrg1 protein_coding protein_coding MGP_WSBEiJ_T0040222.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66066137 66093414 - MGP_WSBEiJ_P0040222 Ndrg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040223.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66066142 66093393 - MGP_WSBEiJ_P0040223 Ndrg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040224.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66066174 66093414 - MGP_WSBEiJ_P0040224 Ndrg1 protein_coding protein_coding MGP_WSBEiJ_T0040225.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66066181 66091738 - MGP_WSBEiJ_P0040225 Ndrg1 protein_coding protein_coding MGP_WSBEiJ_T0040226.1 MGP_WSBEiJ_G0021220.1 mouse_genomes_project 15 66069581 66093438 - MGP_WSBEiJ_P0040226 Ndrg1 protein_coding protein_coding MGP_WSBEiJ_T0040618.1 MGP_WSBEiJ_G0021328.1 mouse_genomes_project 15 76636251 76639093 + MGP_WSBEiJ_P0040618 1110038F14Rik protein_coding protein_coding MGP_WSBEiJ_T0040149.1 MGP_WSBEiJ_G0021205.1 mouse_genomes_project 15 63006898 63158399 - MGP_WSBEiJ_P0040149 Fam49b protein_coding protein_coding MGP_WSBEiJ_T0040150.1 MGP_WSBEiJ_G0021205.1 mouse_genomes_project 15 63008745 63089907 - MGP_WSBEiJ_P0040150 Fam49b protein_coding protein_coding MGP_WSBEiJ_T0012815.1 MGP_WSBEiJ_G0010945.1 mouse_genomes_project 15 100993569 100993926 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041940.1 MGP_WSBEiJ_G0021746.1 mouse_genomes_project 15 105090346 105120578 + MGP_WSBEiJ_P0041940 Copz1 protein_coding protein_coding MGP_WSBEiJ_T0040586.1 MGP_WSBEiJ_G0021319.1 mouse_genomes_project 15 76365327 76372103 - MGP_WSBEiJ_P0040586 Recql4 protein_coding protein_coding MGP_WSBEiJ_T0040932.1 MGP_WSBEiJ_G0021420.1 mouse_genomes_project 15 81547923 81594557 - MGP_WSBEiJ_P0040932 Slc25a17 protein_coding protein_coding MGP_WSBEiJ_T0100026.1 MGP_WSBEiJ_G0038659.1 mouse_genomes_project 15 104417356 104417711 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100027.1 MGP_WSBEiJ_G0038659.1 mouse_genomes_project 15 104417412 104417563 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0041033.1 MGP_WSBEiJ_G0021447.1 mouse_genomes_project 15 82569242 82580000 + MGP_WSBEiJ_P0041033 1500009C09Rik protein_coding protein_coding MGP_WSBEiJ_T0041034.1 MGP_WSBEiJ_G0021447.1 mouse_genomes_project 15 82572955 82580015 + MGP_WSBEiJ_P0041034 1500009C09Rik protein_coding protein_coding MGP_WSBEiJ_T0012809.1 MGP_WSBEiJ_G0010939.1 mouse_genomes_project 15 91623797 91624163 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040913.1 MGP_WSBEiJ_G0021417.1 mouse_genomes_project 15 81197194 81208306 + MGP_WSBEiJ_P0040913 protein_coding protein_coding MGP_WSBEiJ_T0039801.1 MGP_WSBEiJ_G0021066.1 mouse_genomes_project 15 23655137 23790643 + MGP_WSBEiJ_P0039801 Fam134b protein_coding protein_coding MGP_WSBEiJ_T0039802.1 MGP_WSBEiJ_G0021066.1 mouse_genomes_project 15 23756338 23789296 + MGP_WSBEiJ_P0039802 Fam134b protein_coding protein_coding MGP_WSBEiJ_T0040004.1 MGP_WSBEiJ_G0021147.1 mouse_genomes_project 15 43401016 43410577 - MGP_WSBEiJ_P0040004 Kcnv1 protein_coding protein_coding MGP_WSBEiJ_T0039581.1 MGP_WSBEiJ_G0021008.1 mouse_genomes_project 15 1982686 2025219 + MGP_WSBEiJ_P0039581 Prkaa1 protein_coding protein_coding MGP_WSBEiJ_T0041780.1 MGP_WSBEiJ_G0021689.1 mouse_genomes_project 15 103259998 103271970 - MGP_WSBEiJ_P0041780 Krt90 protein_coding protein_coding MGP_WSBEiJ_T0099144.1 MGP_WSBEiJ_G0037807.1 mouse_genomes_project 15 27936666 27936744 - Gm23327 snoRNA snoRNA MGP_WSBEiJ_T0039585.1 MGP_WSBEiJ_G0021010.1 mouse_genomes_project 15 2052742 2089484 - Ptger4 protein_coding processed_transcript MGP_WSBEiJ_T0039586.1 MGP_WSBEiJ_G0021010.1 mouse_genomes_project 15 2080182 2090946 - MGP_WSBEiJ_P0039586 Ptger4 protein_coding protein_coding MGP_WSBEiJ_T0039587.1 MGP_WSBEiJ_G0021010.1 mouse_genomes_project 15 2080182 2090961 - MGP_WSBEiJ_P0039587 Ptger4 protein_coding protein_coding MGP_WSBEiJ_T0039716.1 MGP_WSBEiJ_G0021039.1 mouse_genomes_project 15 7583837 7615701 - MGP_WSBEiJ_P0039716 Ttc23l protein_coding protein_coding MGP_WSBEiJ_T0039717.1 MGP_WSBEiJ_G0021039.1 mouse_genomes_project 15 7587653 7645073 - MGP_WSBEiJ_P0039717 Ttc23l protein_coding protein_coding MGP_WSBEiJ_T0039718.1 MGP_WSBEiJ_G0021039.1 mouse_genomes_project 15 7623384 7645055 - MGP_WSBEiJ_P0039718 Ttc23l protein_coding protein_coding MGP_WSBEiJ_T0009940.1 MGP_WSBEiJ_G0008097.1 mouse_genomes_project 15 104774807 104774892 + Mir196a-2 miRNA miRNA MGP_WSBEiJ_T0041683.1 MGP_WSBEiJ_G0021658.1 mouse_genomes_project 15 101819522 101827963 + MGP_WSBEiJ_P0041683 protein_coding protein_coding MGP_WSBEiJ_T0041358.1 MGP_WSBEiJ_G0021548.1 mouse_genomes_project 15 90648920 90717741 - MGP_WSBEiJ_P0041358 Syt10 protein_coding protein_coding MGP_WSBEiJ_T0041422.1 MGP_WSBEiJ_G0021567.1 mouse_genomes_project 15 95688234 95700190 - MGP_WSBEiJ_P0041422 Twf1 protein_coding protein_coding MGP_WSBEiJ_T0041423.1 MGP_WSBEiJ_G0021567.1 mouse_genomes_project 15 95689947 95695768 - Twf1 protein_coding processed_transcript MGP_WSBEiJ_T0041424.1 MGP_WSBEiJ_G0021567.1 mouse_genomes_project 15 95691310 95691677 - Twf1 protein_coding retained_intron MGP_WSBEiJ_T0041425.1 MGP_WSBEiJ_G0021567.1 mouse_genomes_project 15 95694733 95700200 - MGP_WSBEiJ_P0041425 Twf1 protein_coding protein_coding MGP_WSBEiJ_T0041412.1 MGP_WSBEiJ_G0021564.1 mouse_genomes_project 15 95368702 95494957 - MGP_WSBEiJ_P0041412 Adamts20 protein_coding protein_coding MGP_WSBEiJ_T0041413.1 MGP_WSBEiJ_G0021564.1 mouse_genomes_project 15 95411711 95494957 - MGP_WSBEiJ_P0041413 Adamts20 protein_coding protein_coding MGP_WSBEiJ_T0041414.1 MGP_WSBEiJ_G0021564.1 mouse_genomes_project 15 95443930 95495049 - Adamts20 protein_coding retained_intron MGP_WSBEiJ_T0041415.1 MGP_WSBEiJ_G0021564.1 mouse_genomes_project 15 95484423 95560648 - Adamts20 protein_coding processed_transcript MGP_WSBEiJ_T0040988.1 MGP_WSBEiJ_G0021434.1 mouse_genomes_project 15 82146910 82189768 + MGP_WSBEiJ_P0040988 Aco2 protein_coding protein_coding MGP_WSBEiJ_T0040989.1 MGP_WSBEiJ_G0021434.1 mouse_genomes_project 15 82147085 82164269 + Aco2 protein_coding retained_intron MGP_WSBEiJ_T0040990.1 MGP_WSBEiJ_G0021434.1 mouse_genomes_project 15 82147085 82164270 + Aco2 protein_coding processed_transcript MGP_WSBEiJ_T0040991.1 MGP_WSBEiJ_G0021434.1 mouse_genomes_project 15 82181611 82185145 + Aco2 protein_coding retained_intron MGP_WSBEiJ_T0040992.1 MGP_WSBEiJ_G0021434.1 mouse_genomes_project 15 82181892 82184799 + Aco2 protein_coding retained_intron MGP_WSBEiJ_T0040993.1 MGP_WSBEiJ_G0021434.1 mouse_genomes_project 15 82184924 82187928 + Aco2 protein_coding retained_intron MGP_WSBEiJ_T0039818.1 MGP_WSBEiJ_G0021075.1 mouse_genomes_project 15 28107722 28991662 + MGP_WSBEiJ_P0039818 Ctnnd2 protein_coding protein_coding MGP_WSBEiJ_T0097932.1 MGP_WSBEiJ_G0036595.1 mouse_genomes_project 15 104410143 104410250 - Gm25141 snRNA snRNA MGP_WSBEiJ_T0016870.1 MGP_WSBEiJ_G0014718.1 mouse_genomes_project 15 64966790 64967278 + Gm20405 processed_transcript processed_transcript MGP_WSBEiJ_T0041232.1 MGP_WSBEiJ_G0021519.1 mouse_genomes_project 15 89793083 89805939 + Mov10l1 protein_coding retained_intron MGP_WSBEiJ_T0041233.1 MGP_WSBEiJ_G0021519.1 mouse_genomes_project 15 89793083 89861605 + MGP_WSBEiJ_P0041233 Mov10l1 protein_coding protein_coding MGP_WSBEiJ_T0041234.1 MGP_WSBEiJ_G0021519.1 mouse_genomes_project 15 89793168 89861609 + MGP_WSBEiJ_P0041234 Mov10l1 protein_coding protein_coding MGP_WSBEiJ_T0041235.1 MGP_WSBEiJ_G0021519.1 mouse_genomes_project 15 89831087 89834288 + Mov10l1 protein_coding processed_transcript MGP_WSBEiJ_T0041236.1 MGP_WSBEiJ_G0021519.1 mouse_genomes_project 15 89834279 89861605 + MGP_WSBEiJ_P0041236 Mov10l1 protein_coding protein_coding MGP_WSBEiJ_T0041372.1 MGP_WSBEiJ_G0021554.1 mouse_genomes_project 15 92190467 92509609 - MGP_WSBEiJ_P0041372 Slc2a13 protein_coding protein_coding MGP_WSBEiJ_T0041373.1 MGP_WSBEiJ_G0021554.1 mouse_genomes_project 15 92324552 92341134 - Slc2a13 protein_coding processed_transcript MGP_WSBEiJ_T0041374.1 MGP_WSBEiJ_G0021554.1 mouse_genomes_project 15 92476620 92509542 - Slc2a13 protein_coding processed_transcript MGP_WSBEiJ_T0040510.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76016249 76084036 + Mroh1 protein_coding processed_transcript MGP_WSBEiJ_T0040511.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76016501 76050864 + Mroh1 protein_coding processed_transcript MGP_WSBEiJ_T0040512.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76016501 76097479 + MGP_WSBEiJ_P0040512 Mroh1 protein_coding protein_coding MGP_WSBEiJ_T0040513.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76016511 76097476 + Mroh1 protein_coding retained_intron MGP_WSBEiJ_T0040514.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76016520 76043452 + MGP_WSBEiJ_P0040514 Mroh1 protein_coding protein_coding MGP_WSBEiJ_T0040515.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76016541 76050863 + MGP_WSBEiJ_P0040515 Mroh1 protein_coding protein_coding MGP_WSBEiJ_T0040516.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76029488 76084036 + MGP_WSBEiJ_P0040516 Mroh1 protein_coding protein_coding MGP_WSBEiJ_T0040517.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76031765 76097419 + MGP_WSBEiJ_P0040517 Mroh1 protein_coding protein_coding MGP_WSBEiJ_T0040518.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76071330 76097479 + Mroh1 protein_coding retained_intron MGP_WSBEiJ_T0040519.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76072087 76078214 + MGP_WSBEiJ_P0040519 Mroh1 protein_coding protein_coding MGP_WSBEiJ_T0040520.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76085334 76091271 + Mroh1 protein_coding retained_intron MGP_WSBEiJ_T0040521.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76094070 76095646 + Mroh1 protein_coding retained_intron MGP_WSBEiJ_T0040522.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76095053 76095811 + Mroh1 protein_coding retained_intron MGP_WSBEiJ_T0040523.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76096239 76096810 + Mroh1 protein_coding retained_intron MGP_WSBEiJ_T0040524.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76096287 76097479 + MGP_WSBEiJ_P0040524 Mroh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040525.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76096564 76097479 + MGP_WSBEiJ_P0040525 Mroh1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040526.1 MGP_WSBEiJ_G0021301.1 mouse_genomes_project 15 76096579 76097478 + Mroh1 protein_coding retained_intron MGP_WSBEiJ_T0012795.1 MGP_WSBEiJ_G0010925.1 mouse_genomes_project 15 75444274 75445684 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041766.1 MGP_WSBEiJ_G0021680.1 mouse_genomes_project 15 102923065 102929707 + MGP_WSBEiJ_P0041766 Atg101 protein_coding protein_coding MGP_WSBEiJ_T0100586.1 MGP_WSBEiJ_G0039044.1 mouse_genomes_project 15 74817107 74833389 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097911.1 MGP_WSBEiJ_G0036574.1 mouse_genomes_project 15 75639641 75639777 + Gm23027 snRNA snRNA MGP_WSBEiJ_T0040142.1 MGP_WSBEiJ_G0021204.1 mouse_genomes_project 15 60981350 60986362 + MGP_WSBEiJ_P0040142 Myc protein_coding protein_coding MGP_WSBEiJ_T0040143.1 MGP_WSBEiJ_G0021204.1 mouse_genomes_project 15 60981440 60986360 + MGP_WSBEiJ_P0040143 Myc protein_coding protein_coding MGP_WSBEiJ_T0040144.1 MGP_WSBEiJ_G0021204.1 mouse_genomes_project 15 60981613 60986384 + MGP_WSBEiJ_P0040144 Myc protein_coding protein_coding MGP_WSBEiJ_T0040145.1 MGP_WSBEiJ_G0021204.1 mouse_genomes_project 15 60981671 60986046 + MGP_WSBEiJ_P0040145 Myc protein_coding protein_coding MGP_WSBEiJ_T0040146.1 MGP_WSBEiJ_G0021204.1 mouse_genomes_project 15 60981971 60985887 + MGP_WSBEiJ_P0040146 Myc protein_coding protein_coding MGP_WSBEiJ_T0040147.1 MGP_WSBEiJ_G0021204.1 mouse_genomes_project 15 60983083 60983663 + MGP_WSBEiJ_P0040147 Myc protein_coding protein_coding MGP_WSBEiJ_T0040148.1 MGP_WSBEiJ_G0021204.1 mouse_genomes_project 15 60983467 60986232 + MGP_WSBEiJ_P0040148 Myc protein_coding protein_coding MGP_WSBEiJ_T0041801.1 MGP_WSBEiJ_G0021708.1 mouse_genomes_project 15 103855110 103874257 - Spryd3 protein_coding retained_intron MGP_WSBEiJ_T0041802.1 MGP_WSBEiJ_G0021708.1 mouse_genomes_project 15 103855110 103874299 - MGP_WSBEiJ_P0041802 Spryd3 protein_coding protein_coding MGP_WSBEiJ_T0041803.1 MGP_WSBEiJ_G0021708.1 mouse_genomes_project 15 103856751 103866964 - Spryd3 protein_coding processed_transcript MGP_WSBEiJ_T0041804.1 MGP_WSBEiJ_G0021708.1 mouse_genomes_project 15 103868296 103868987 - Spryd3 protein_coding retained_intron MGP_WSBEiJ_T0012773.1 MGP_WSBEiJ_G0010903.1 mouse_genomes_project 15 34934107 34952286 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099178.1 MGP_WSBEiJ_G0037841.1 mouse_genomes_project 15 100548400 100548506 - Gm25183 snoRNA snoRNA MGP_WSBEiJ_T0041092.1 MGP_WSBEiJ_G0021470.1 mouse_genomes_project 15 83967816 84000250 - MGP_WSBEiJ_P0041092 Ttll1 protein_coding protein_coding MGP_WSBEiJ_T0041093.1 MGP_WSBEiJ_G0021470.1 mouse_genomes_project 15 83990439 84000145 - MGP_WSBEiJ_P0041093 Ttll1 protein_coding protein_coding MGP_WSBEiJ_T0041094.1 MGP_WSBEiJ_G0021470.1 mouse_genomes_project 15 83995067 84000235 - Ttll1 protein_coding processed_transcript MGP_WSBEiJ_T0041654.1 MGP_WSBEiJ_G0021648.1 mouse_genomes_project 15 101169838 101177329 + MGP_WSBEiJ_P0041654 Gpd1 protein_coding protein_coding MGP_WSBEiJ_T0041655.1 MGP_WSBEiJ_G0021648.1 mouse_genomes_project 15 101169902 101176116 + MGP_WSBEiJ_P0041655 Gpd1 protein_coding protein_coding MGP_WSBEiJ_T0041656.1 MGP_WSBEiJ_G0021648.1 mouse_genomes_project 15 101172319 101174371 + Gpd1 protein_coding retained_intron MGP_WSBEiJ_T0040141.1 MGP_WSBEiJ_G0021203.1 mouse_genomes_project 15 59862943 59866625 - MGP_WSBEiJ_P0040141 A1bg protein_coding protein_coding MGP_WSBEiJ_T0039602.1 MGP_WSBEiJ_G0021012.1 mouse_genomes_project 15 3314478 3369417 + MGP_WSBEiJ_P0039602 C9 protein_coding protein_coding MGP_WSBEiJ_T0039603.1 MGP_WSBEiJ_G0021012.1 mouse_genomes_project 15 3314523 3339434 + MGP_WSBEiJ_P0039603 C9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039604.1 MGP_WSBEiJ_G0021012.1 mouse_genomes_project 15 3360136 3362111 + C9 protein_coding retained_intron MGP_WSBEiJ_T0039605.1 MGP_WSBEiJ_G0021012.1 mouse_genomes_project 15 3360574 3369410 + MGP_WSBEiJ_P0039605 C9 protein_coding protein_coding MGP_WSBEiJ_T0040339.1 MGP_WSBEiJ_G0021257.1 mouse_genomes_project 15 74468754 74952886 - MGP_WSBEiJ_P0040339 Ly6a protein_coding protein_coding MGP_WSBEiJ_T0040345.1 MGP_WSBEiJ_G0021257.1 mouse_genomes_project 15 74952389 74952687 - MGP_WSBEiJ_P0040345 Ly6a protein_coding protein_coding MGP_WSBEiJ_T0040723.1 MGP_WSBEiJ_G0021368.1 mouse_genomes_project 15 78948134 78953432 + MGP_WSBEiJ_P0040723 Lgals1 protein_coding protein_coding MGP_WSBEiJ_T0040585.1 MGP_WSBEiJ_G0021318.1 mouse_genomes_project 15 76363316 76366014 + MGP_WSBEiJ_P0040585 Mfsd3 protein_coding protein_coding MGP_WSBEiJ_T0040461.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75913823 75924198 - MGP_WSBEiJ_P0040461 Oplah protein_coding protein_coding MGP_WSBEiJ_T0040462.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75913829 75914718 - Oplah protein_coding retained_intron MGP_WSBEiJ_T0040463.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75913829 75924342 - MGP_WSBEiJ_P0040463 Oplah protein_coding protein_coding MGP_WSBEiJ_T0040464.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75914568 75915266 - Oplah protein_coding retained_intron MGP_WSBEiJ_T0040465.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75917696 75918225 - Oplah protein_coding retained_intron MGP_WSBEiJ_T0040466.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75917985 75919472 - Oplah protein_coding retained_intron MGP_WSBEiJ_T0040467.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75918063 75924486 - MGP_WSBEiJ_P0040467 Oplah protein_coding protein_coding MGP_WSBEiJ_T0040468.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75919173 75920307 - Oplah protein_coding processed_transcript MGP_WSBEiJ_T0040469.1 MGP_WSBEiJ_G0021292.1 mouse_genomes_project 15 75923583 75955022 - MGP_WSBEiJ_P0040469 Oplah protein_coding protein_coding MGP_WSBEiJ_T0039567.1 MGP_WSBEiJ_G0021001.1 mouse_genomes_project 15 1236203 1378439 + MGP_WSBEiJ_P0039567 Plcxd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039568.1 MGP_WSBEiJ_G0021001.1 mouse_genomes_project 15 1236216 1437183 + MGP_WSBEiJ_P0039568 Plcxd3 protein_coding protein_coding MGP_WSBEiJ_T0040870.1 MGP_WSBEiJ_G0021403.1 mouse_genomes_project 15 80207904 80213499 - Rpl3 protein_coding retained_intron MGP_WSBEiJ_T0040871.1 MGP_WSBEiJ_G0021403.1 mouse_genomes_project 15 80207904 80214256 - Rpl3 protein_coding retained_intron MGP_WSBEiJ_T0040872.1 MGP_WSBEiJ_G0021403.1 mouse_genomes_project 15 80207904 80214256 - MGP_WSBEiJ_P0040872 Rpl3 protein_coding protein_coding MGP_WSBEiJ_T0040873.1 MGP_WSBEiJ_G0021403.1 mouse_genomes_project 15 80211083 80214236 - MGP_WSBEiJ_P0040873 Rpl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040874.1 MGP_WSBEiJ_G0021403.1 mouse_genomes_project 15 80211571 80222509 - MGP_WSBEiJ_P0040874 Rpl3 protein_coding protein_coding MGP_WSBEiJ_T0040875.1 MGP_WSBEiJ_G0021403.1 mouse_genomes_project 15 80212897 80214240 - Rpl3 protein_coding retained_intron MGP_WSBEiJ_T0006697.1 MGP_WSBEiJ_G0005525.1 mouse_genomes_project 15 92536103 92543487 + 4933438A12Rik lincRNA lincRNA MGP_WSBEiJ_T0041157.1 MGP_WSBEiJ_G0021489.1 mouse_genomes_project 15 85480721 85492965 - MGP_WSBEiJ_P0041157 Gm29666 protein_coding protein_coding MGP_WSBEiJ_T0099164.1 MGP_WSBEiJ_G0037827.1 mouse_genomes_project 15 60314156 60314290 - Gm24696 snoRNA snoRNA MGP_WSBEiJ_T0039859.1 MGP_WSBEiJ_G0021091.1 mouse_genomes_project 15 32370804 32506190 + MGP_WSBEiJ_P0039859 Matn2 protein_coding protein_coding MGP_WSBEiJ_T0039860.1 MGP_WSBEiJ_G0021091.1 mouse_genomes_project 15 32370805 32506194 + MGP_WSBEiJ_P0039860 Matn2 protein_coding protein_coding MGP_WSBEiJ_T0039990.1 MGP_WSBEiJ_G0021139.1 mouse_genomes_project 15 41731713 41779737 + MGP_WSBEiJ_P0039990 Emc2 protein_coding protein_coding MGP_WSBEiJ_T0040810.1 MGP_WSBEiJ_G0021386.1 mouse_genomes_project 15 79552147 79573695 - MGP_WSBEiJ_P0040810 Kcnj4 protein_coding protein_coding MGP_WSBEiJ_T0041913.1 MGP_WSBEiJ_G0021738.1 mouse_genomes_project 15 104777863 104783425 + MGP_WSBEiJ_P0041913 Hoxc9 protein_coding protein_coding MGP_WSBEiJ_T0041914.1 MGP_WSBEiJ_G0021738.1 mouse_genomes_project 15 104778804 104786757 + MGP_WSBEiJ_P0041914 Hoxc9 protein_coding protein_coding MGP_WSBEiJ_T0040612.1 MGP_WSBEiJ_G0021324.1 mouse_genomes_project 15 76556357 76569357 + MGP_WSBEiJ_P0040612 Zfp7 protein_coding protein_coding MGP_WSBEiJ_T0041698.1 MGP_WSBEiJ_G0021664.1 mouse_genomes_project 15 102050392 102066079 - MGP_WSBEiJ_P0041698 Csrnp2 protein_coding protein_coding MGP_WSBEiJ_T0041532.1 MGP_WSBEiJ_G0021602.1 mouse_genomes_project 15 99779229 99785392 + MGP_WSBEiJ_P0041532 Olfr282 protein_coding protein_coding MGP_WSBEiJ_T0041533.1 MGP_WSBEiJ_G0021602.1 mouse_genomes_project 15 99784946 99785874 + MGP_WSBEiJ_P0041533 Olfr282 protein_coding protein_coding MGP_WSBEiJ_T0040063.1 MGP_WSBEiJ_G0021169.1 mouse_genomes_project 15 54275442 54300202 - MGP_WSBEiJ_P0040063 Mrpl13 protein_coding protein_coding MGP_WSBEiJ_T0040064.1 MGP_WSBEiJ_G0021169.1 mouse_genomes_project 15 54275442 54299803 - MGP_WSBEiJ_P0040064 Mrpl13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040065.1 MGP_WSBEiJ_G0021169.1 mouse_genomes_project 15 54279990 54290750 - MGP_WSBEiJ_P0040065 Mrpl13 protein_coding protein_coding MGP_WSBEiJ_T0040066.1 MGP_WSBEiJ_G0021169.1 mouse_genomes_project 15 54284240 54299737 - Mrpl13 protein_coding retained_intron MGP_WSBEiJ_T0040067.1 MGP_WSBEiJ_G0021169.1 mouse_genomes_project 15 54292029 54299729 - Mrpl13 protein_coding retained_intron MGP_WSBEiJ_T0003565.1 MGP_WSBEiJ_G0003231.1 mouse_genomes_project 15 101454387 101455545 - 2310068J16Rik antisense antisense MGP_WSBEiJ_T0009883.1 MGP_WSBEiJ_G0008040.1 mouse_genomes_project 15 35550687 35550813 - Gm23654 miRNA miRNA MGP_WSBEiJ_T0041568.1 MGP_WSBEiJ_G0021617.1 mouse_genomes_project 15 100182401 100186384 + MGP_WSBEiJ_P0041568 Wnt1 protein_coding protein_coding MGP_WSBEiJ_T0040472.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75958246 75961923 + MGP_WSBEiJ_P0040472 Gpaa1 protein_coding protein_coding MGP_WSBEiJ_T0040473.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75958359 75961914 + MGP_WSBEiJ_P0040473 Gpaa1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040474.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75958360 75961919 + MGP_WSBEiJ_P0040474 Gpaa1 protein_coding protein_coding MGP_WSBEiJ_T0040475.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75958365 75959830 + Gpaa1 protein_coding retained_intron MGP_WSBEiJ_T0040476.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75958528 75959502 + MGP_WSBEiJ_P0040476 Gpaa1 protein_coding protein_coding MGP_WSBEiJ_T0040477.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75959014 75959937 + MGP_WSBEiJ_P0040477 Gpaa1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040478.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75959238 75960633 + Gpaa1 protein_coding retained_intron MGP_WSBEiJ_T0040479.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75959542 75960263 + MGP_WSBEiJ_P0040479 Gpaa1 protein_coding protein_coding MGP_WSBEiJ_T0040480.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75960184 75961309 + Gpaa1 protein_coding retained_intron MGP_WSBEiJ_T0040481.1 MGP_WSBEiJ_G0021294.1 mouse_genomes_project 15 75960746 75961314 + Gpaa1 protein_coding retained_intron MGP_WSBEiJ_T0099134.1 MGP_WSBEiJ_G0037797.1 mouse_genomes_project 15 1949395 1949476 + Snord72 snoRNA snoRNA MGP_WSBEiJ_T0041720.1 MGP_WSBEiJ_G0021670.1 mouse_genomes_project 15 102254319 102270812 - MGP_WSBEiJ_P0041720 Cela1 protein_coding protein_coding MGP_WSBEiJ_T0041909.1 MGP_WSBEiJ_G0021734.1 mouse_genomes_project 15 104737854 104739709 + MGP_WSBEiJ_P0041909 Hoxc12 protein_coding protein_coding MGP_WSBEiJ_T0039991.1 MGP_WSBEiJ_G0021140.1 mouse_genomes_project 15 42138908 42142231 - MGP_WSBEiJ_P0039991 Tmem74 protein_coding protein_coding MGP_WSBEiJ_T0097926.1 MGP_WSBEiJ_G0036589.1 mouse_genomes_project 15 97904500 97904608 + Gm22045 snRNA snRNA MGP_WSBEiJ_T0040884.1 MGP_WSBEiJ_G0021409.1 mouse_genomes_project 15 80407919 80411592 - MGP_WSBEiJ_P0040884 Rps19bp1 protein_coding protein_coding MGP_WSBEiJ_T0040455.1 MGP_WSBEiJ_G0021289.1 mouse_genomes_project 15 75862386 75865491 + MGP_WSBEiJ_P0040455 Grina protein_coding protein_coding MGP_WSBEiJ_T0041873.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298413 104301148 + Tarbp2 protein_coding retained_intron MGP_WSBEiJ_T0041874.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298546 104304497 + MGP_WSBEiJ_P0041874 Tarbp2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041875.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298594 104304539 + Tarbp2 protein_coding retained_intron MGP_WSBEiJ_T0041876.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298622 104301917 + MGP_WSBEiJ_P0041876 Tarbp2 protein_coding protein_coding MGP_WSBEiJ_T0041877.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298665 104299888 + Tarbp2 protein_coding retained_intron MGP_WSBEiJ_T0041878.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298724 104303387 + Tarbp2 protein_coding processed_transcript MGP_WSBEiJ_T0041879.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298735 104302507 + Tarbp2 protein_coding retained_intron MGP_WSBEiJ_T0041880.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298893 104302719 + MGP_WSBEiJ_P0041880 Tarbp2 protein_coding protein_coding MGP_WSBEiJ_T0041881.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298966 104302248 + MGP_WSBEiJ_P0041881 Tarbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041882.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104298969 104303070 + MGP_WSBEiJ_P0041882 Tarbp2 protein_coding protein_coding MGP_WSBEiJ_T0041883.1 MGP_WSBEiJ_G0021727.1 mouse_genomes_project 15 104301207 104302608 + Tarbp2 protein_coding retained_intron MGP_WSBEiJ_T0012811.1 MGP_WSBEiJ_G0010941.1 mouse_genomes_project 15 92492572 92494340 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039642.1 MGP_WSBEiJ_G0021023.1 mouse_genomes_project 15 5609903 5691286 - MGP_WSBEiJ_P0039642 Slc1a3 protein_coding protein_coding MGP_WSBEiJ_T0039643.1 MGP_WSBEiJ_G0021023.1 mouse_genomes_project 15 5610506 5629374 - Slc1a3 protein_coding retained_intron MGP_WSBEiJ_T0039644.1 MGP_WSBEiJ_G0021023.1 mouse_genomes_project 15 5619260 5620267 - Slc1a3 protein_coding retained_intron MGP_WSBEiJ_T0039645.1 MGP_WSBEiJ_G0021023.1 mouse_genomes_project 15 5658720 5690938 - Slc1a3 protein_coding processed_transcript MGP_WSBEiJ_T0039646.1 MGP_WSBEiJ_G0021023.1 mouse_genomes_project 15 5665228 5690931 - MGP_WSBEiJ_P0039646 Slc1a3 protein_coding protein_coding MGP_WSBEiJ_T0039647.1 MGP_WSBEiJ_G0021023.1 mouse_genomes_project 15 5667110 5691018 - Slc1a3 protein_coding retained_intron MGP_WSBEiJ_T0039648.1 MGP_WSBEiJ_G0021023.1 mouse_genomes_project 15 5688131 5691003 - Slc1a3 protein_coding retained_intron MGP_WSBEiJ_T0039649.1 MGP_WSBEiJ_G0021023.1 mouse_genomes_project 15 5689264 5690110 - Slc1a3 protein_coding processed_transcript MGP_WSBEiJ_T0039881.1 MGP_WSBEiJ_G0021098.1 mouse_genomes_project 15 32913994 32918954 + MGP_WSBEiJ_P0039881 Kcns2 protein_coding protein_coding MGP_WSBEiJ_T0041828.1 MGP_WSBEiJ_G0021717.1 mouse_genomes_project 15 104085383 104090634 + Pfdn5 protein_coding retained_intron MGP_WSBEiJ_T0041829.1 MGP_WSBEiJ_G0021717.1 mouse_genomes_project 15 104085404 104090575 + MGP_WSBEiJ_P0041829 Pfdn5 protein_coding protein_coding MGP_WSBEiJ_T0041830.1 MGP_WSBEiJ_G0021717.1 mouse_genomes_project 15 104085404 104090712 + MGP_WSBEiJ_P0041830 Pfdn5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041831.1 MGP_WSBEiJ_G0021717.1 mouse_genomes_project 15 104085404 104090575 + MGP_WSBEiJ_P0041831 Pfdn5 protein_coding protein_coding MGP_WSBEiJ_T0041832.1 MGP_WSBEiJ_G0021717.1 mouse_genomes_project 15 104085606 104090688 + MGP_WSBEiJ_P0041832 Pfdn5 protein_coding protein_coding MGP_WSBEiJ_T0040713.1 MGP_WSBEiJ_G0021364.1 mouse_genomes_project 15 78856324 78864571 + MGP_WSBEiJ_P0040713 Cdc42ep1 protein_coding protein_coding MGP_WSBEiJ_T0012801.1 MGP_WSBEiJ_G0010931.1 mouse_genomes_project 15 79772143 79782652 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099175.1 MGP_WSBEiJ_G0037838.1 mouse_genomes_project 15 99373815 99373944 + Gm25668 snoRNA snoRNA MGP_WSBEiJ_T0012776.1 MGP_WSBEiJ_G0010906.1 mouse_genomes_project 15 35677871 35678356 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040543.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76223816 76246798 + MGP_WSBEiJ_P0040543 Adck5 protein_coding protein_coding MGP_WSBEiJ_T0040544.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76223817 76246790 + MGP_WSBEiJ_P0040544 Adck5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040545.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76223837 76246798 + Adck5 protein_coding retained_intron MGP_WSBEiJ_T0040546.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76223847 76246798 + MGP_WSBEiJ_P0040546 Adck5 protein_coding protein_coding MGP_WSBEiJ_T0040547.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76223863 76242807 + Adck5 protein_coding processed_transcript MGP_WSBEiJ_T0040548.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76223870 76246791 + Adck5 protein_coding retained_intron MGP_WSBEiJ_T0040549.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76223871 76240702 + Adck5 protein_coding processed_transcript MGP_WSBEiJ_T0040550.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76223932 76246632 + MGP_WSBEiJ_P0040550 Adck5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040551.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76244419 76245152 + Adck5 protein_coding retained_intron MGP_WSBEiJ_T0040552.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76244882 76246138 + Adck5 protein_coding retained_intron MGP_WSBEiJ_T0040553.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76245149 76246170 + Adck5 protein_coding retained_intron MGP_WSBEiJ_T0040554.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76245274 76246798 + Adck5 protein_coding retained_intron MGP_WSBEiJ_T0040555.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76245803 76246145 + Adck5 protein_coding retained_intron MGP_WSBEiJ_T0040556.1 MGP_WSBEiJ_G0021309.1 mouse_genomes_project 15 76245945 76246698 + Adck5 protein_coding retained_intron MGP_WSBEiJ_T0041522.1 MGP_WSBEiJ_G0021599.1 mouse_genomes_project 15 99677962 99678880 - MGP_WSBEiJ_P0041522 Olfr284 protein_coding protein_coding MGP_WSBEiJ_T0041523.1 MGP_WSBEiJ_G0021599.1 mouse_genomes_project 15 99677962 99678928 - MGP_WSBEiJ_P0041523 Olfr284 protein_coding protein_coding MGP_WSBEiJ_T0041686.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101950805 101987154 - MGP_WSBEiJ_P0041686 Slc11a2 protein_coding protein_coding MGP_WSBEiJ_T0041687.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101954872 101987209 - MGP_WSBEiJ_P0041687 Slc11a2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041688.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101955324 101987101 - MGP_WSBEiJ_P0041688 Slc11a2 protein_coding protein_coding MGP_WSBEiJ_T0041689.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101960411 101966022 - MGP_WSBEiJ_P0041689 Slc11a2 protein_coding protein_coding MGP_WSBEiJ_T0041690.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101960599 101966201 - Slc11a2 protein_coding retained_intron MGP_WSBEiJ_T0041691.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101969183 101989170 - MGP_WSBEiJ_P0041691 Slc11a2 protein_coding protein_coding MGP_WSBEiJ_T0041692.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101971048 101987068 - MGP_WSBEiJ_P0041692 Slc11a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041693.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101972182 101988312 - MGP_WSBEiJ_P0041693 Slc11a2 protein_coding protein_coding MGP_WSBEiJ_T0041694.1 MGP_WSBEiJ_G0021661.1 mouse_genomes_project 15 101973028 101988190 - MGP_WSBEiJ_P0041694 Slc11a2 protein_coding protein_coding MGP_WSBEiJ_T0040296.1 MGP_WSBEiJ_G0021240.1 mouse_genomes_project 15 74065110 74072346 - MGP_WSBEiJ_P0040296 Jrk protein_coding protein_coding MGP_WSBEiJ_T0039719.1 MGP_WSBEiJ_G0021040.1 mouse_genomes_project 15 7655330 7807622 - MGP_WSBEiJ_P0039719 Rai14 protein_coding protein_coding MGP_WSBEiJ_T0039720.1 MGP_WSBEiJ_G0021040.1 mouse_genomes_project 15 7655330 7808710 - MGP_WSBEiJ_P0039720 Rai14 protein_coding protein_coding MGP_WSBEiJ_T0040812.1 MGP_WSBEiJ_G0021388.1 mouse_genomes_project 15 79599576 79620861 - MGP_WSBEiJ_P0040812 Ddx17 protein_coding protein_coding MGP_WSBEiJ_T0006653.1 MGP_WSBEiJ_G0005497.1 mouse_genomes_project 15 36459719 36461534 - Gm8705 lincRNA lincRNA MGP_WSBEiJ_T0012806.1 MGP_WSBEiJ_G0010936.1 mouse_genomes_project 15 85700266 85700684 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097919.1 MGP_WSBEiJ_G0036582.1 mouse_genomes_project 15 85952368 85952560 - Gm23517 snRNA snRNA MGP_WSBEiJ_T0039569.1 MGP_WSBEiJ_G0021002.1 mouse_genomes_project 15 1580795 1650800 + MGP_WSBEiJ_P0039569 C6 protein_coding protein_coding MGP_WSBEiJ_T0039570.1 MGP_WSBEiJ_G0021002.1 mouse_genomes_project 15 1580836 1613445 + MGP_WSBEiJ_P0039570 C6 protein_coding protein_coding MGP_WSBEiJ_T0039571.1 MGP_WSBEiJ_G0021002.1 mouse_genomes_project 15 1580836 1650509 + MGP_WSBEiJ_P0039571 C6 protein_coding protein_coding MGP_WSBEiJ_T0039572.1 MGP_WSBEiJ_G0021002.1 mouse_genomes_project 15 1580904 1663411 + MGP_WSBEiJ_P0039572 C6 protein_coding protein_coding MGP_WSBEiJ_T0039573.1 MGP_WSBEiJ_G0021002.1 mouse_genomes_project 15 1591848 1637379 + MGP_WSBEiJ_P0039573 C6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039574.1 MGP_WSBEiJ_G0021002.1 mouse_genomes_project 15 1620283 1637098 + C6 protein_coding processed_transcript MGP_WSBEiJ_T0040684.1 MGP_WSBEiJ_G0021353.1 mouse_genomes_project 15 78388882 78396176 + MGP_WSBEiJ_P0040684 Mpst protein_coding protein_coding MGP_WSBEiJ_T0040685.1 MGP_WSBEiJ_G0021353.1 mouse_genomes_project 15 78388971 78396176 + MGP_WSBEiJ_P0040685 Mpst protein_coding protein_coding MGP_WSBEiJ_T0040686.1 MGP_WSBEiJ_G0021353.1 mouse_genomes_project 15 78389277 78396176 + MGP_WSBEiJ_P0040686 Mpst protein_coding protein_coding MGP_WSBEiJ_T0041498.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99340962 99396726 - MGP_WSBEiJ_P0041498 Senp1 protein_coding protein_coding MGP_WSBEiJ_T0041499.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99343434 99368315 - Senp1 protein_coding retained_intron MGP_WSBEiJ_T0041500.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99343595 99397596 - MGP_WSBEiJ_P0041500 Senp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041501.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99343935 99397278 - MGP_WSBEiJ_P0041501 Senp1 protein_coding protein_coding MGP_WSBEiJ_T0041502.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99345089 99351899 - Senp1 protein_coding processed_transcript MGP_WSBEiJ_T0041503.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99367193 99397397 - Senp1 protein_coding retained_intron MGP_WSBEiJ_T0041504.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99389102 99391600 - MGP_WSBEiJ_P0041504 Senp1 protein_coding protein_coding MGP_WSBEiJ_T0041505.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99392612 99397332 - Senp1 protein_coding processed_transcript MGP_WSBEiJ_T0041506.1 MGP_WSBEiJ_G0021590.1 mouse_genomes_project 15 99393246 99396914 - Senp1 protein_coding processed_transcript MGP_WSBEiJ_T0041680.1 MGP_WSBEiJ_G0021656.1 mouse_genomes_project 15 101791962 101804714 + MGP_WSBEiJ_P0041680 Tmprss12 protein_coding protein_coding MGP_WSBEiJ_T0016851.1 MGP_WSBEiJ_G0014710.1 mouse_genomes_project 15 4307302 4321425 + Gm16029 processed_transcript processed_transcript MGP_WSBEiJ_T0040110.1 MGP_WSBEiJ_G0021183.1 mouse_genomes_project 15 57017104 57056838 - MGP_WSBEiJ_P0040110 Fbxo32 protein_coding protein_coding MGP_WSBEiJ_T0039771.1 MGP_WSBEiJ_G0021058.1 mouse_genomes_project 15 16291352 16500009 + MGP_WSBEiJ_P0039771 Cdh10 protein_coding protein_coding MGP_WSBEiJ_T0039772.1 MGP_WSBEiJ_G0021058.1 mouse_genomes_project 15 16291363 16380708 + Cdh10 protein_coding retained_intron MGP_WSBEiJ_T0039773.1 MGP_WSBEiJ_G0021058.1 mouse_genomes_project 15 16291382 16450591 + Cdh10 protein_coding retained_intron MGP_WSBEiJ_T0039774.1 MGP_WSBEiJ_G0021058.1 mouse_genomes_project 15 16292733 16500009 + MGP_WSBEiJ_P0039774 Cdh10 protein_coding protein_coding MGP_WSBEiJ_T0039775.1 MGP_WSBEiJ_G0021058.1 mouse_genomes_project 15 16377165 16499456 + MGP_WSBEiJ_P0039775 Cdh10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039776.1 MGP_WSBEiJ_G0021058.1 mouse_genomes_project 15 16490817 16500009 + Cdh10 protein_coding retained_intron MGP_WSBEiJ_T0009875.1 MGP_WSBEiJ_G0008032.1 mouse_genomes_project 15 23763678 23763739 + Mir7212 miRNA miRNA MGP_WSBEiJ_T0040052.1 MGP_WSBEiJ_G0021166.1 mouse_genomes_project 15 53826138 53840881 - MGP_WSBEiJ_P0040052 Gm9920 protein_coding protein_coding MGP_WSBEiJ_T0040053.1 MGP_WSBEiJ_G0021166.1 mouse_genomes_project 15 53826286 53840759 - MGP_WSBEiJ_P0040053 Gm9920 protein_coding protein_coding MGP_WSBEiJ_T0040054.1 MGP_WSBEiJ_G0021166.1 mouse_genomes_project 15 53837574 53840976 - Gm9920 protein_coding processed_transcript MGP_WSBEiJ_T0040055.1 MGP_WSBEiJ_G0021166.1 mouse_genomes_project 15 53839161 53840759 - Gm9920 protein_coding retained_intron MGP_WSBEiJ_T0041596.1 MGP_WSBEiJ_G0021633.1 mouse_genomes_project 15 100669270 100678436 - MGP_WSBEiJ_P0041596 Mcrs1 protein_coding protein_coding MGP_WSBEiJ_T0041427.1 MGP_WSBEiJ_G0021569.1 mouse_genomes_project 15 96353431 96682413 - MGP_WSBEiJ_P0041427 Nell2 protein_coding protein_coding MGP_WSBEiJ_T0041428.1 MGP_WSBEiJ_G0021569.1 mouse_genomes_project 15 96353910 96681959 - MGP_WSBEiJ_P0041428 Nell2 protein_coding protein_coding MGP_WSBEiJ_T0041588.1 MGP_WSBEiJ_G0021627.1 mouse_genomes_project 15 100465184 100468975 + MGP_WSBEiJ_P0041588 Prph protein_coding protein_coding MGP_WSBEiJ_T0041589.1 MGP_WSBEiJ_G0021627.1 mouse_genomes_project 15 100465184 100468975 + MGP_WSBEiJ_P0041589 Prph protein_coding protein_coding MGP_WSBEiJ_T0006683.1 MGP_WSBEiJ_G0005515.1 mouse_genomes_project 15 78876750 78881902 - Gm26634 lincRNA lincRNA MGP_WSBEiJ_T0100579.1 MGP_WSBEiJ_G0039037.1 mouse_genomes_project 15 74676960 74680680 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0040724.1 MGP_WSBEiJ_G0021369.1 mouse_genomes_project 15 78957687 78967771 + MGP_WSBEiJ_P0040724 Nol12 protein_coding protein_coding MGP_WSBEiJ_T0040725.1 MGP_WSBEiJ_G0021369.1 mouse_genomes_project 15 78957705 78963751 + MGP_WSBEiJ_P0040725 Nol12 protein_coding protein_coding MGP_WSBEiJ_T0040726.1 MGP_WSBEiJ_G0021369.1 mouse_genomes_project 15 78957749 78963683 + MGP_WSBEiJ_P0040726 Nol12 protein_coding protein_coding MGP_WSBEiJ_T0040727.1 MGP_WSBEiJ_G0021369.1 mouse_genomes_project 15 78957940 78960648 + MGP_WSBEiJ_P0040727 Nol12 protein_coding protein_coding MGP_WSBEiJ_T0040728.1 MGP_WSBEiJ_G0021369.1 mouse_genomes_project 15 78957962 78959338 + MGP_WSBEiJ_P0040728 Nol12 protein_coding protein_coding MGP_WSBEiJ_T0040975.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82068334 82095698 + MGP_WSBEiJ_P0040975 Tef protein_coding protein_coding MGP_WSBEiJ_T0040976.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82068620 82071947 + Tef protein_coding processed_transcript MGP_WSBEiJ_T0040977.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82068643 82071252 + Tef protein_coding processed_transcript MGP_WSBEiJ_T0040978.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82068650 82082910 + Tef protein_coding retained_intron MGP_WSBEiJ_T0040979.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82068739 82071809 + Tef protein_coding processed_transcript MGP_WSBEiJ_T0040980.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82076942 82087118 + MGP_WSBEiJ_P0040980 Tef protein_coding protein_coding MGP_WSBEiJ_T0040981.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82077310 82095535 + MGP_WSBEiJ_P0040981 Tef protein_coding protein_coding MGP_WSBEiJ_T0040982.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82078056 82081107 + MGP_WSBEiJ_P0040982 Tef protein_coding protein_coding MGP_WSBEiJ_T0040983.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82086454 82087245 + Tef protein_coding processed_transcript MGP_WSBEiJ_T0040984.1 MGP_WSBEiJ_G0021430.1 mouse_genomes_project 15 82086804 82092616 + Tef protein_coding retained_intron MGP_WSBEiJ_T0039786.1 MGP_WSBEiJ_G0021063.1 mouse_genomes_project 15 23146997 23200284 - MGP_WSBEiJ_P0039786 Basp1 protein_coding protein_coding MGP_WSBEiJ_T0099163.1 MGP_WSBEiJ_G0037826.1 mouse_genomes_project 15 59631591 59631723 - Gm23835 snoRNA snoRNA MGP_WSBEiJ_T0041667.1 MGP_WSBEiJ_G0021652.1 mouse_genomes_project 15 101394518 101410039 - MGP_WSBEiJ_P0041667 protein_coding protein_coding MGP_WSBEiJ_T0041668.1 MGP_WSBEiJ_G0021652.1 mouse_genomes_project 15 101394523 101446920 - MGP_WSBEiJ_P0041668 protein_coding protein_coding MGP_WSBEiJ_T0097905.1 MGP_WSBEiJ_G0036568.1 mouse_genomes_project 15 62528854 62528917 - Gm25702 snRNA snRNA MGP_WSBEiJ_T0041132.1 MGP_WSBEiJ_G0021483.1 mouse_genomes_project 15 84867864 84870883 + Parvg protein_coding processed_transcript MGP_WSBEiJ_T0041133.1 MGP_WSBEiJ_G0021483.1 mouse_genomes_project 15 84868558 84889028 + MGP_WSBEiJ_P0041133 Parvg protein_coding protein_coding MGP_WSBEiJ_T0041134.1 MGP_WSBEiJ_G0021483.1 mouse_genomes_project 15 84868572 84872723 + MGP_WSBEiJ_P0041134 Parvg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041135.1 MGP_WSBEiJ_G0021483.1 mouse_genomes_project 15 84868600 84872709 + MGP_WSBEiJ_P0041135 Parvg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041136.1 MGP_WSBEiJ_G0021483.1 mouse_genomes_project 15 84868633 84873928 + Parvg protein_coding processed_transcript MGP_WSBEiJ_T0041137.1 MGP_WSBEiJ_G0021483.1 mouse_genomes_project 15 84869951 84889064 + MGP_WSBEiJ_P0041137 Parvg protein_coding protein_coding MGP_WSBEiJ_T0041138.1 MGP_WSBEiJ_G0021483.1 mouse_genomes_project 15 84869951 84872759 + MGP_WSBEiJ_P0041138 Parvg protein_coding protein_coding MGP_WSBEiJ_T0009879.1 MGP_WSBEiJ_G0008036.1 mouse_genomes_project 15 33762694 33762772 - Mir875 miRNA miRNA MGP_WSBEiJ_T0011182.1 MGP_WSBEiJ_G0009339.1 mouse_genomes_project 15 3371273 3371549 + Gm23218 misc_RNA misc_RNA MGP_WSBEiJ_T0041791.1 MGP_WSBEiJ_G0021699.1 mouse_genomes_project 15 103580623 103591597 - MGP_WSBEiJ_P0041791 Krt77 protein_coding protein_coding MGP_WSBEiJ_T0040139.1 MGP_WSBEiJ_G0021202.1 mouse_genomes_project 15 59744180 59750267 - MGP_WSBEiJ_P0040139 Fam84b protein_coding protein_coding MGP_WSBEiJ_T0040140.1 MGP_WSBEiJ_G0021202.1 mouse_genomes_project 15 59750218 59780585 - Fam84b protein_coding processed_transcript MGP_WSBEiJ_T0006709.1 MGP_WSBEiJ_G0005532.1 mouse_genomes_project 15 102030825 102039457 - 5330439K02Rik lincRNA lincRNA MGP_WSBEiJ_T0041488.1 MGP_WSBEiJ_G0021588.1 mouse_genomes_project 15 99264062 99270009 + MGP_WSBEiJ_P0041488 Tmem106c protein_coding unknown_likely_coding MGP_WSBEiJ_T0006639.1 MGP_WSBEiJ_G0005487.1 mouse_genomes_project 15 842895 864096 + Gm2093 lincRNA lincRNA MGP_WSBEiJ_T0039725.1 MGP_WSBEiJ_G0021044.1 mouse_genomes_project 15 8123176 8127469 - MGP_WSBEiJ_P0039725 Rxfp3 protein_coding protein_coding MGP_WSBEiJ_T0040715.1 MGP_WSBEiJ_G0021366.1 mouse_genomes_project 15 78892178 78910737 + MGP_WSBEiJ_P0040715 Gga1 protein_coding protein_coding MGP_WSBEiJ_T0040895.1 MGP_WSBEiJ_G0021414.1 mouse_genomes_project 15 80892659 81131526 + MGP_WSBEiJ_P0040895 Tnrc6b protein_coding protein_coding MGP_WSBEiJ_T0012818.1 MGP_WSBEiJ_G0010948.1 mouse_genomes_project 15 105408487 105409730 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009880.1 MGP_WSBEiJ_G0008037.1 mouse_genomes_project 15 34364400 34364519 - Mir8097 miRNA miRNA MGP_WSBEiJ_T0040921.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81208850 81395031 - MGP_WSBEiJ_P0040921 Mkl1 protein_coding protein_coding MGP_WSBEiJ_T0040922.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81208850 81395007 - MGP_WSBEiJ_P0040922 Mkl1 protein_coding protein_coding MGP_WSBEiJ_T0040923.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81208860 81309623 - MGP_WSBEiJ_P0040923 Mkl1 protein_coding protein_coding MGP_WSBEiJ_T0040924.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81208860 81394997 - MGP_WSBEiJ_P0040924 Mkl1 protein_coding protein_coding MGP_WSBEiJ_T0040925.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81212434 81244672 - MGP_WSBEiJ_P0040925 Mkl1 protein_coding protein_coding MGP_WSBEiJ_T0040926.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81213343 81214769 - Mkl1 protein_coding retained_intron MGP_WSBEiJ_T0040927.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81216818 81217885 - Mkl1 protein_coding retained_intron MGP_WSBEiJ_T0040928.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81219071 81220581 - Mkl1 protein_coding retained_intron MGP_WSBEiJ_T0040929.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81222789 81395002 - Mkl1 protein_coding retained_intron MGP_WSBEiJ_T0040930.1 MGP_WSBEiJ_G0021418.1 mouse_genomes_project 15 81244258 81394796 - Mkl1 protein_coding retained_intron MGP_WSBEiJ_T0039701.1 MGP_WSBEiJ_G0021036.1 mouse_genomes_project 15 7528975 7552771 - MGP_WSBEiJ_P0039701 Dnajc21 protein_coding protein_coding MGP_WSBEiJ_T0039702.1 MGP_WSBEiJ_G0021036.1 mouse_genomes_project 15 7528984 7543939 - MGP_WSBEiJ_P0039702 Dnajc21 protein_coding protein_coding MGP_WSBEiJ_T0039703.1 MGP_WSBEiJ_G0021036.1 mouse_genomes_project 15 7528985 7532224 - Dnajc21 protein_coding retained_intron MGP_WSBEiJ_T0039704.1 MGP_WSBEiJ_G0021036.1 mouse_genomes_project 15 7529917 7534150 - Dnajc21 protein_coding retained_intron MGP_WSBEiJ_T0039705.1 MGP_WSBEiJ_G0021036.1 mouse_genomes_project 15 7534806 7544460 - Dnajc21 protein_coding retained_intron MGP_WSBEiJ_T0097915.1 MGP_WSBEiJ_G0036578.1 mouse_genomes_project 15 80219112 80219219 - Gm24204 snRNA snRNA MGP_WSBEiJ_T0040210.1 MGP_WSBEiJ_G0021219.1 mouse_genomes_project 15 66014413 66046256 + MGP_WSBEiJ_P0040210 Wisp1 protein_coding protein_coding MGP_WSBEiJ_T0040211.1 MGP_WSBEiJ_G0021219.1 mouse_genomes_project 15 66014480 66043132 + MGP_WSBEiJ_P0040211 Wisp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040212.1 MGP_WSBEiJ_G0021219.1 mouse_genomes_project 15 66014601 66042510 + MGP_WSBEiJ_P0040212 Wisp1 protein_coding protein_coding MGP_WSBEiJ_T0040213.1 MGP_WSBEiJ_G0021219.1 mouse_genomes_project 15 66032391 66042290 + Wisp1 protein_coding processed_transcript MGP_WSBEiJ_T0041636.1 MGP_WSBEiJ_G0021643.1 mouse_genomes_project 15 101044766 101048712 + MGP_WSBEiJ_P0041636 Aqp6 protein_coding protein_coding MGP_WSBEiJ_T0041267.1 MGP_WSBEiJ_G0021525.1 mouse_genomes_project 15 89940915 89952616 - MGP_WSBEiJ_P0041267 Mapk12 protein_coding protein_coding MGP_WSBEiJ_T0039898.1 MGP_WSBEiJ_G0021104.1 mouse_genomes_project 15 34273915 34288695 - MGP_WSBEiJ_P0039898 Fbxo43 protein_coding protein_coding MGP_WSBEiJ_T0003534.1 MGP_WSBEiJ_G0003208.1 mouse_genomes_project 15 71048449 71052122 + Gm16308 antisense antisense MGP_WSBEiJ_T0039846.1 MGP_WSBEiJ_G0021087.1 mouse_genomes_project 15 31136707 31638384 + MGP_WSBEiJ_P0039846 Cpq protein_coding protein_coding MGP_WSBEiJ_T0041778.1 MGP_WSBEiJ_G0021687.1 mouse_genomes_project 15 103227819 103235639 - MGP_WSBEiJ_P0041778 Krt84 protein_coding protein_coding MGP_WSBEiJ_T0012796.1 MGP_WSBEiJ_G0010926.1 mouse_genomes_project 15 75559664 75560941 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006695.1 MGP_WSBEiJ_G0005523.1 mouse_genomes_project 15 86259776 86267582 + D130051D11Rik lincRNA lincRNA MGP_WSBEiJ_T0009910.1 MGP_WSBEiJ_G0008067.1 mouse_genomes_project 15 81130464 81130546 + Mir5113 miRNA miRNA MGP_WSBEiJ_T0003537.1 MGP_WSBEiJ_G0003210.1 mouse_genomes_project 15 74148165 74167110 + Gm17189 antisense antisense MGP_WSBEiJ_T0041313.1 MGP_WSBEiJ_G0021537.1 mouse_genomes_project 15 90207942 90209746 - MGP_WSBEiJ_P0041313 Odf3b protein_coding protein_coding MGP_WSBEiJ_T0041314.1 MGP_WSBEiJ_G0021537.1 mouse_genomes_project 15 90207998 90209670 - MGP_WSBEiJ_P0041314 Odf3b protein_coding unknown_likely_coding MGP_WSBEiJ_T0012791.1 MGP_WSBEiJ_G0010921.1 mouse_genomes_project 15 72190949 72191153 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041908.1 MGP_WSBEiJ_G0021733.1 mouse_genomes_project 15 104722291 104729853 + MGP_WSBEiJ_P0041908 Hoxc13 protein_coding protein_coding MGP_WSBEiJ_T0012767.1 MGP_WSBEiJ_G0010897.1 mouse_genomes_project 15 20659981 20663877 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011202.1 MGP_WSBEiJ_G0009359.1 mouse_genomes_project 15 104751406 104751563 + Gm27535 misc_RNA misc_RNA MGP_WSBEiJ_T0039858.1 MGP_WSBEiJ_G0021090.1 mouse_genomes_project 15 32300114 32346879 + MGP_WSBEiJ_P0039858 Laptm4b protein_coding protein_coding MGP_WSBEiJ_T0012792.1 MGP_WSBEiJ_G0010922.1 mouse_genomes_project 15 72906375 72910718 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040132.1 MGP_WSBEiJ_G0021197.1 mouse_genomes_project 15 58284396 58453078 + MGP_WSBEiJ_P0040132 Nsmce2 protein_coding protein_coding MGP_WSBEiJ_T0040133.1 MGP_WSBEiJ_G0021197.1 mouse_genomes_project 15 58284396 58515979 + MGP_WSBEiJ_P0040133 Nsmce2 protein_coding protein_coding MGP_WSBEiJ_T0040957.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81921291 81948628 + MGP_WSBEiJ_P0040957 L3mbtl2 protein_coding protein_coding MGP_WSBEiJ_T0040958.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81921336 81948618 + MGP_WSBEiJ_P0040958 L3mbtl2 protein_coding protein_coding MGP_WSBEiJ_T0040959.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81921356 81948618 + L3mbtl2 protein_coding retained_intron MGP_WSBEiJ_T0040960.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81921358 81948612 + L3mbtl2 protein_coding processed_transcript MGP_WSBEiJ_T0040961.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81921358 81948628 + MGP_WSBEiJ_P0040961 L3mbtl2 protein_coding protein_coding MGP_WSBEiJ_T0040962.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81921403 81942378 + L3mbtl2 protein_coding processed_transcript MGP_WSBEiJ_T0040963.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81925839 81927527 + L3mbtl2 protein_coding retained_intron MGP_WSBEiJ_T0040964.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81925908 81934399 + L3mbtl2 protein_coding processed_transcript MGP_WSBEiJ_T0040965.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81934287 81936060 + MGP_WSBEiJ_P0040965 L3mbtl2 protein_coding protein_coding MGP_WSBEiJ_T0040967.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81942321 81944163 + L3mbtl2 protein_coding retained_intron MGP_WSBEiJ_T0040968.1 MGP_WSBEiJ_G0021426.1 mouse_genomes_project 15 81946334 81947500 + L3mbtl2 protein_coding retained_intron MGP_WSBEiJ_T0039630.1 MGP_WSBEiJ_G0021018.1 mouse_genomes_project 15 4725232 4751961 + MGP_WSBEiJ_P0039630 Gdnf protein_coding protein_coding MGP_WSBEiJ_T0011196.1 MGP_WSBEiJ_G0009353.1 mouse_genomes_project 15 99234437 99234748 + Gm22202 misc_RNA misc_RNA MGP_WSBEiJ_T0041930.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105065719 105072927 - MGP_WSBEiJ_P0041930 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041931.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105065724 105068953 - MGP_WSBEiJ_P0041931 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041932.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105065724 105069004 - MGP_WSBEiJ_P0041932 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041933.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105065727 105069164 - MGP_WSBEiJ_P0041933 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041934.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105065782 105069003 - MGP_WSBEiJ_P0041934 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041935.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105066462 105070640 - MGP_WSBEiJ_P0041935 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041936.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105066514 105071550 - MGP_WSBEiJ_P0041936 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041937.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105066576 105069175 - MGP_WSBEiJ_P0041937 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041938.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105066746 105070298 - MGP_WSBEiJ_P0041938 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041939.1 MGP_WSBEiJ_G0021745.1 mouse_genomes_project 15 105066856 105075889 - MGP_WSBEiJ_P0041939 Nfe2 protein_coding protein_coding MGP_WSBEiJ_T0041551.1 MGP_WSBEiJ_G0021610.1 mouse_genomes_project 15 100007792 100020731 + MGP_WSBEiJ_P0041551 Cacnb3 protein_coding protein_coding MGP_WSBEiJ_T0041552.1 MGP_WSBEiJ_G0021610.1 mouse_genomes_project 15 100010333 100020731 + MGP_WSBEiJ_P0041552 Cacnb3 protein_coding protein_coding MGP_WSBEiJ_T0040646.1 MGP_WSBEiJ_G0021341.1 mouse_genomes_project 15 77634310 77642949 + MGP_WSBEiJ_P0040646 protein_coding protein_coding MGP_WSBEiJ_T0041521.1 MGP_WSBEiJ_G0021598.1 mouse_genomes_project 15 99655361 99656321 - MGP_WSBEiJ_P0041521 Olfr285 protein_coding protein_coding MGP_WSBEiJ_T0039893.1 MGP_WSBEiJ_G0021103.1 mouse_genomes_project 15 34124753 34263111 - MGP_WSBEiJ_P0039893 Rgs22 protein_coding protein_coding MGP_WSBEiJ_T0039894.1 MGP_WSBEiJ_G0021103.1 mouse_genomes_project 15 34124844 34158582 - MGP_WSBEiJ_P0039894 Rgs22 protein_coding protein_coding MGP_WSBEiJ_T0039895.1 MGP_WSBEiJ_G0021103.1 mouse_genomes_project 15 34125607 34229487 - MGP_WSBEiJ_P0039895 Rgs22 protein_coding protein_coding MGP_WSBEiJ_T0039896.1 MGP_WSBEiJ_G0021103.1 mouse_genomes_project 15 34167656 34202396 - MGP_WSBEiJ_P0039896 Rgs22 protein_coding protein_coding MGP_WSBEiJ_T0039897.1 MGP_WSBEiJ_G0021103.1 mouse_genomes_project 15 34261936 34263096 - Rgs22 protein_coding retained_intron MGP_WSBEiJ_T0041298.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90185230 90202331 + MGP_WSBEiJ_P0041298 Ncaph2 protein_coding protein_coding MGP_WSBEiJ_T0041299.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90185247 90202331 + MGP_WSBEiJ_P0041299 Ncaph2 protein_coding protein_coding MGP_WSBEiJ_T0041300.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90185247 90202331 + MGP_WSBEiJ_P0041300 Ncaph2 protein_coding protein_coding MGP_WSBEiJ_T0041301.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90185274 90202331 + MGP_WSBEiJ_P0041301 Ncaph2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041302.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90185316 90193385 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0041303.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90185332 90193409 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0041304.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90185425 90194836 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0041305.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90199196 90200180 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0041306.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90199382 90200745 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0041307.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90199537 90200694 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0041308.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90199802 90200437 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0041309.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90200151 90201029 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0041310.1 MGP_WSBEiJ_G0021534.1 mouse_genomes_project 15 90200257 90201068 + Ncaph2 protein_coding retained_intron MGP_WSBEiJ_T0039742.1 MGP_WSBEiJ_G0021050.1 mouse_genomes_project 15 9363885 9434324 + MGP_WSBEiJ_P0039742 Mtmr12 protein_coding protein_coding MGP_WSBEiJ_T0039743.1 MGP_WSBEiJ_G0021050.1 mouse_genomes_project 15 9363942 9434078 + MGP_WSBEiJ_P0039743 Mtmr12 protein_coding protein_coding MGP_WSBEiJ_T0039744.1 MGP_WSBEiJ_G0021050.1 mouse_genomes_project 15 9363961 9434203 + MGP_WSBEiJ_P0039744 Mtmr12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039745.1 MGP_WSBEiJ_G0021050.1 mouse_genomes_project 15 9363975 9434321 + MGP_WSBEiJ_P0039745 Mtmr12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039746.1 MGP_WSBEiJ_G0021050.1 mouse_genomes_project 15 9382858 9404403 + Mtmr12 protein_coding processed_transcript MGP_WSBEiJ_T0041590.1 MGP_WSBEiJ_G0021628.1 mouse_genomes_project 15 100486228 100494477 + MGP_WSBEiJ_P0041590 Troap protein_coding protein_coding MGP_WSBEiJ_T0040456.1 MGP_WSBEiJ_G0021290.1 mouse_genomes_project 15 75883611 75909846 + MGP_WSBEiJ_P0040456 Spatc1 protein_coding protein_coding MGP_WSBEiJ_T0011181.1 MGP_WSBEiJ_G0009338.1 mouse_genomes_project 15 654759 655029 + Gm23228 misc_RNA misc_RNA MGP_WSBEiJ_T0041861.1 MGP_WSBEiJ_G0021724.1 mouse_genomes_project 15 104248185 104278578 + MGP_WSBEiJ_P0041861 Pcbp2 protein_coding protein_coding MGP_WSBEiJ_T0041862.1 MGP_WSBEiJ_G0021724.1 mouse_genomes_project 15 104248185 104278578 + MGP_WSBEiJ_P0041862 Pcbp2 protein_coding protein_coding MGP_WSBEiJ_T0041863.1 MGP_WSBEiJ_G0021724.1 mouse_genomes_project 15 104248185 104278578 + MGP_WSBEiJ_P0041863 Pcbp2 protein_coding protein_coding MGP_WSBEiJ_T0012787.1 MGP_WSBEiJ_G0010917.1 mouse_genomes_project 15 58935594 58938867 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039921.1 MGP_WSBEiJ_G0021113.1 mouse_genomes_project 15 35165382 35176896 - MGP_WSBEiJ_P0039921 Zfp706 protein_coding protein_coding MGP_WSBEiJ_T0039843.1 MGP_WSBEiJ_G0021085.1 mouse_genomes_project 15 30268505 30741721 + MGP_WSBEiJ_P0039843 Sema5a protein_coding protein_coding MGP_WSBEiJ_T0009939.1 MGP_WSBEiJ_G0008096.1 mouse_genomes_project 15 104457126 104457201 - Mir688 miRNA miRNA MGP_WSBEiJ_T0041319.1 MGP_WSBEiJ_G0021541.1 mouse_genomes_project 15 90251865 90265197 - MGP_WSBEiJ_P0041319 Cpt1b protein_coding protein_coding MGP_WSBEiJ_T0041320.1 MGP_WSBEiJ_G0021541.1 mouse_genomes_project 15 90254213 90258982 - MGP_WSBEiJ_P0041320 Cpt1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041321.1 MGP_WSBEiJ_G0021541.1 mouse_genomes_project 15 90261329 90262037 - Cpt1b protein_coding retained_intron MGP_WSBEiJ_T0041322.1 MGP_WSBEiJ_G0021541.1 mouse_genomes_project 15 90262401 90265129 - MGP_WSBEiJ_P0041322 Cpt1b protein_coding protein_coding MGP_WSBEiJ_T0097923.1 MGP_WSBEiJ_G0036586.1 mouse_genomes_project 15 90933479 90933586 - Gm24415 snRNA snRNA MGP_WSBEiJ_T0040304.1 MGP_WSBEiJ_G0021246.1 mouse_genomes_project 15 74112815 74118011 - MGP_WSBEiJ_P0040304 Lynx1 protein_coding protein_coding MGP_WSBEiJ_T0040305.1 MGP_WSBEiJ_G0021246.1 mouse_genomes_project 15 74116558 74117979 - MGP_WSBEiJ_P0040305 Lynx1 protein_coding protein_coding MGP_WSBEiJ_T0040306.1 MGP_WSBEiJ_G0021246.1 mouse_genomes_project 15 74117283 74117989 - Lynx1 protein_coding retained_intron MGP_WSBEiJ_T0016853.1 MGP_WSBEiJ_G0014712.1 mouse_genomes_project 15 31261526 31265876 + processed_transcript processed_transcript MGP_WSBEiJ_T0041779.1 MGP_WSBEiJ_G0021688.1 mouse_genomes_project 15 103244568 103256646 - MGP_WSBEiJ_P0041779 Krt82 protein_coding protein_coding MGP_WSBEiJ_T0041957.1 MGP_WSBEiJ_G0021755.1 mouse_genomes_project 15 105385162 105387479 - MGP_WSBEiJ_P0041957 Glycam1 protein_coding protein_coding MGP_WSBEiJ_T0041767.1 MGP_WSBEiJ_G0021681.1 mouse_genomes_project 15 103007624 103028031 - MGP_WSBEiJ_P0041767 Krt80 protein_coding protein_coding MGP_WSBEiJ_T0040322.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356095 74360959 + MGP_WSBEiJ_P0040322 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040323.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356095 74360957 + MGP_WSBEiJ_P0040323 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040324.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356115 74360959 + MGP_WSBEiJ_P0040324 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040325.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356149 74359830 + MGP_WSBEiJ_P0040325 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040326.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356185 74359443 + MGP_WSBEiJ_P0040326 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040327.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356207 74359810 + MGP_WSBEiJ_P0040327 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040328.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356221 74359709 + MGP_WSBEiJ_P0040328 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040329.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356229 74359781 + MGP_WSBEiJ_P0040329 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040330.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356284 74359647 + MGP_WSBEiJ_P0040330 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040331.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356303 74359714 + MGP_WSBEiJ_P0040331 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040332.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356696 74360385 + MGP_WSBEiJ_P0040332 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040333.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356709 74360083 + Ly6e protein_coding retained_intron MGP_WSBEiJ_T0040334.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356711 74360385 + Ly6e protein_coding retained_intron MGP_WSBEiJ_T0040335.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356715 74359664 + MGP_WSBEiJ_P0040335 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0040336.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74356726 74357541 + Ly6e protein_coding retained_intron MGP_WSBEiJ_T0040337.1 MGP_WSBEiJ_G0021255.1 mouse_genomes_project 15 74357608 74359880 + MGP_WSBEiJ_P0040337 Ly6e protein_coding protein_coding MGP_WSBEiJ_T0099159.1 MGP_WSBEiJ_G0037822.1 mouse_genomes_project 15 51175807 51175931 + Gm23267 snoRNA snoRNA MGP_WSBEiJ_T0039614.1 MGP_WSBEiJ_G0021015.1 mouse_genomes_project 15 3702595 3766481 - MGP_WSBEiJ_P0039614 Osmr protein_coding protein_coding MGP_WSBEiJ_T0039615.1 MGP_WSBEiJ_G0021015.1 mouse_genomes_project 15 3704056 3766481 - MGP_WSBEiJ_P0039615 Osmr protein_coding protein_coding MGP_WSBEiJ_T0039616.1 MGP_WSBEiJ_G0021015.1 mouse_genomes_project 15 3709621 3713469 - Osmr protein_coding retained_intron MGP_WSBEiJ_T0039617.1 MGP_WSBEiJ_G0021015.1 mouse_genomes_project 15 3727073 3765780 - Osmr protein_coding retained_intron MGP_WSBEiJ_T0039618.1 MGP_WSBEiJ_G0021015.1 mouse_genomes_project 15 3734766 3765769 - Osmr protein_coding retained_intron MGP_WSBEiJ_T0039619.1 MGP_WSBEiJ_G0021015.1 mouse_genomes_project 15 3745793 3765808 - Osmr protein_coding retained_intron MGP_WSBEiJ_T0040931.1 MGP_WSBEiJ_G0021419.1 mouse_genomes_project 15 81445850 81449819 + MGP_WSBEiJ_P0040931 Mchr1 protein_coding protein_coding MGP_WSBEiJ_T0039631.1 MGP_WSBEiJ_G0021019.1 mouse_genomes_project 15 4784392 5031713 - MGP_WSBEiJ_P0039631 Wdr70 protein_coding protein_coding MGP_WSBEiJ_T0040185.1 MGP_WSBEiJ_G0021211.1 mouse_genomes_project 15 64987076 65023116 - MGP_WSBEiJ_P0040185 Oc90 protein_coding protein_coding MGP_WSBEiJ_T0040186.1 MGP_WSBEiJ_G0021211.1 mouse_genomes_project 15 64987076 65010095 - MGP_WSBEiJ_P0040186 Oc90 protein_coding protein_coding MGP_WSBEiJ_T0040187.1 MGP_WSBEiJ_G0021211.1 mouse_genomes_project 15 64987076 65023259 - MGP_WSBEiJ_P0040187 Oc90 protein_coding protein_coding MGP_WSBEiJ_T0040188.1 MGP_WSBEiJ_G0021211.1 mouse_genomes_project 15 64987415 65001501 - MGP_WSBEiJ_P0040188 Oc90 protein_coding protein_coding MGP_WSBEiJ_T0040189.1 MGP_WSBEiJ_G0021211.1 mouse_genomes_project 15 64987543 64998642 - MGP_WSBEiJ_P0040189 Oc90 protein_coding protein_coding MGP_WSBEiJ_T0012760.1 MGP_WSBEiJ_G0010890.1 mouse_genomes_project 15 4257374 4257977 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096973.1 MGP_WSBEiJ_G0035654.1 mouse_genomes_project 15 87874373 87874477 + n-R5s42 rRNA rRNA MGP_WSBEiJ_T0040508.1 MGP_WSBEiJ_G0021299.1 mouse_genomes_project 15 76003985 76006491 + MGP_WSBEiJ_P0040508 Hgh1 protein_coding protein_coding MGP_WSBEiJ_T0040665.1 MGP_WSBEiJ_G0021345.1 mouse_genomes_project 15 77861241 77881193 - MGP_WSBEiJ_P0040665 Foxred2 protein_coding protein_coding MGP_WSBEiJ_T0040666.1 MGP_WSBEiJ_G0021345.1 mouse_genomes_project 15 77861245 77866598 - Foxred2 protein_coding retained_intron MGP_WSBEiJ_T0040667.1 MGP_WSBEiJ_G0021345.1 mouse_genomes_project 15 77861733 77881146 - MGP_WSBEiJ_P0040667 Foxred2 protein_coding protein_coding MGP_WSBEiJ_T0040668.1 MGP_WSBEiJ_G0021345.1 mouse_genomes_project 15 77876205 77881154 - Foxred2 protein_coding retained_intron MGP_WSBEiJ_T0099153.1 MGP_WSBEiJ_G0037816.1 mouse_genomes_project 15 37157510 37157641 + Gm24789 snoRNA snoRNA MGP_WSBEiJ_T0041917.1 MGP_WSBEiJ_G0021740.1 mouse_genomes_project 15 104799816 104812328 + Hoxc6 protein_coding processed_transcript MGP_WSBEiJ_T0041918.1 MGP_WSBEiJ_G0021740.1 mouse_genomes_project 15 104802086 104811566 + Hoxc6 protein_coding processed_transcript MGP_WSBEiJ_T0041919.1 MGP_WSBEiJ_G0021740.1 mouse_genomes_project 15 104811132 104813441 + MGP_WSBEiJ_P0041919 Hoxc6 protein_coding protein_coding MGP_WSBEiJ_T0039969.1 MGP_WSBEiJ_G0021129.1 mouse_genomes_project 15 37870061 37884878 + MGP_WSBEiJ_P0039969 Dcstamp protein_coding protein_coding MGP_WSBEiJ_T0099157.1 MGP_WSBEiJ_G0037820.1 mouse_genomes_project 15 43238948 43239091 + Gm23343 snoRNA snoRNA MGP_WSBEiJ_T0099145.1 MGP_WSBEiJ_G0037808.1 mouse_genomes_project 15 27981124 27981302 - Gm26163 snoRNA snoRNA MGP_WSBEiJ_T0097897.1 MGP_WSBEiJ_G0036560.1 mouse_genomes_project 15 47003145 47003278 + Gm25007 snRNA snRNA MGP_WSBEiJ_T0040136.1 MGP_WSBEiJ_G0021199.1 mouse_genomes_project 15 58919653 58920658 + MGP_WSBEiJ_P0040136 protein_coding protein_coding MGP_WSBEiJ_T0041820.1 MGP_WSBEiJ_G0021714.1 mouse_genomes_project 15 103985333 104010420 - MGP_WSBEiJ_P0041820 Rarg protein_coding protein_coding MGP_WSBEiJ_T0041821.1 MGP_WSBEiJ_G0021714.1 mouse_genomes_project 15 103985335 103997616 - MGP_WSBEiJ_P0041821 Rarg protein_coding protein_coding MGP_WSBEiJ_T0041822.1 MGP_WSBEiJ_G0021714.1 mouse_genomes_project 15 103991088 104010254 - MGP_WSBEiJ_P0041822 Rarg protein_coding protein_coding MGP_WSBEiJ_T0041823.1 MGP_WSBEiJ_G0021714.1 mouse_genomes_project 15 103993073 103994724 - Rarg protein_coding processed_transcript MGP_WSBEiJ_T0041824.1 MGP_WSBEiJ_G0021714.1 mouse_genomes_project 15 103993077 103996348 - Rarg protein_coding processed_transcript MGP_WSBEiJ_T0041825.1 MGP_WSBEiJ_G0021714.1 mouse_genomes_project 15 103993077 104003232 - Rarg protein_coding processed_transcript MGP_WSBEiJ_T0041578.1 MGP_WSBEiJ_G0021622.1 mouse_genomes_project 15 100290050 100295558 - MGP_WSBEiJ_P0041578 Dhh protein_coding protein_coding MGP_WSBEiJ_T0039811.1 MGP_WSBEiJ_G0021071.1 mouse_genomes_project 15 25459766 25485334 - MGP_WSBEiJ_P0039811 Otulin protein_coding protein_coding MGP_WSBEiJ_T0006649.1 MGP_WSBEiJ_G0005493.1 mouse_genomes_project 15 30246759 30247410 + 4930518I17Rik lincRNA lincRNA MGP_WSBEiJ_T0040714.1 MGP_WSBEiJ_G0021365.1 mouse_genomes_project 15 78864534 78869272 - MGP_WSBEiJ_P0040714 Lgals2 protein_coding protein_coding MGP_WSBEiJ_T0040696.1 MGP_WSBEiJ_G0021355.1 mouse_genomes_project 15 78424499 78455395 - MGP_WSBEiJ_P0040696 Tmprss6 protein_coding protein_coding MGP_WSBEiJ_T0041091.1 MGP_WSBEiJ_G0021469.1 mouse_genomes_project 15 83856170 83949504 - MGP_WSBEiJ_P0041091 Pacsin2 protein_coding protein_coding MGP_WSBEiJ_T0006658.1 MGP_WSBEiJ_G0005502.1 mouse_genomes_project 15 40000992 40034458 - Gm26854 lincRNA lincRNA MGP_WSBEiJ_T0040083.1 MGP_WSBEiJ_G0021175.1 mouse_genomes_project 15 56688559 56711971 - MGP_WSBEiJ_P0040083 Derl1 protein_coding protein_coding MGP_WSBEiJ_T0041006.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82281358 82315506 + MGP_WSBEiJ_P0041006 Xrcc6 protein_coding protein_coding MGP_WSBEiJ_T0041013.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82309781 82332868 + MGP_WSBEiJ_P0041013 Xrcc6 protein_coding protein_coding MGP_WSBEiJ_T0041014.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82309844 82318569 + MGP_WSBEiJ_P0041014 Xrcc6 protein_coding protein_coding MGP_WSBEiJ_T0041015.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82309895 82318618 + MGP_WSBEiJ_P0041015 Xrcc6 protein_coding protein_coding MGP_WSBEiJ_T0041016.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82315214 82315862 + Xrcc6 protein_coding retained_intron MGP_WSBEiJ_T0041017.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82315907 82320692 + Xrcc6 protein_coding retained_intron MGP_WSBEiJ_T0041018.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82318320 82322521 + Xrcc6 protein_coding retained_intron MGP_WSBEiJ_T0041019.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82320999 82332577 + Xrcc6 protein_coding processed_transcript MGP_WSBEiJ_T0041020.1 MGP_WSBEiJ_G0021438.1 mouse_genomes_project 15 82321988 82330246 + Xrcc6 protein_coding retained_intron MGP_WSBEiJ_T0040266.1 MGP_WSBEiJ_G0021233.1 mouse_genomes_project 15 73025537 73038567 - MGP_WSBEiJ_P0040266 Gpr20 protein_coding protein_coding MGP_WSBEiJ_T0040797.1 MGP_WSBEiJ_G0021384.1 mouse_genomes_project 15 79420478 79468822 - MGP_WSBEiJ_P0040797 Tmem184b protein_coding unknown_likely_coding MGP_WSBEiJ_T0040798.1 MGP_WSBEiJ_G0021384.1 mouse_genomes_project 15 79421870 79468856 - MGP_WSBEiJ_P0040798 Tmem184b protein_coding protein_coding MGP_WSBEiJ_T0040799.1 MGP_WSBEiJ_G0021384.1 mouse_genomes_project 15 79421870 79468472 - MGP_WSBEiJ_P0040799 Tmem184b protein_coding protein_coding MGP_WSBEiJ_T0039733.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9273855 9343162 + MGP_WSBEiJ_P0039733 Zfr protein_coding protein_coding MGP_WSBEiJ_T0039734.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9273875 9302480 + MGP_WSBEiJ_P0039734 Zfr protein_coding protein_coding MGP_WSBEiJ_T0039735.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9273883 9294294 + MGP_WSBEiJ_P0039735 Zfr protein_coding protein_coding MGP_WSBEiJ_T0039736.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9273890 9278373 + Zfr protein_coding processed_transcript MGP_WSBEiJ_T0039737.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9316297 9322929 + MGP_WSBEiJ_P0039737 Zfr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039738.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9317251 9341480 + MGP_WSBEiJ_P0039738 Zfr protein_coding protein_coding MGP_WSBEiJ_T0039739.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9322867 9341945 + MGP_WSBEiJ_P0039739 Zfr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039740.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9327165 9328675 + Zfr protein_coding retained_intron MGP_WSBEiJ_T0039741.1 MGP_WSBEiJ_G0021049.1 mouse_genomes_project 15 9337100 9341945 + Zfr protein_coding processed_transcript MGP_WSBEiJ_T0096783.1 MGP_WSBEiJ_G0035464.1 mouse_genomes_project 15 43168971 43170647 + pseudogene pseudogene MGP_WSBEiJ_T0041209.1 MGP_WSBEiJ_G0021509.1 mouse_genomes_project 15 86878379 87160577 + MGP_WSBEiJ_P0041209 Tbc1d22a protein_coding protein_coding MGP_WSBEiJ_T0041633.1 MGP_WSBEiJ_G0021641.1 mouse_genomes_project 15 101021359 101026606 + MGP_WSBEiJ_P0041633 Aqp2 protein_coding protein_coding MGP_WSBEiJ_T0012789.1 MGP_WSBEiJ_G0010919.1 mouse_genomes_project 15 63106329 63106741 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040271.1 MGP_WSBEiJ_G0021235.1 mouse_genomes_project 15 73094990 73165122 - MGP_WSBEiJ_P0040271 Mroh5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040272.1 MGP_WSBEiJ_G0021235.1 mouse_genomes_project 15 73114442 73117015 - Mroh5 protein_coding processed_transcript MGP_WSBEiJ_T0040273.1 MGP_WSBEiJ_G0021235.1 mouse_genomes_project 15 73119383 73175053 - MGP_WSBEiJ_P0040273 Mroh5 protein_coding protein_coding MGP_WSBEiJ_T0040274.1 MGP_WSBEiJ_G0021235.1 mouse_genomes_project 15 73119907 73153143 - MGP_WSBEiJ_P0040274 Mroh5 protein_coding protein_coding MGP_WSBEiJ_T0040275.1 MGP_WSBEiJ_G0021235.1 mouse_genomes_project 15 73130734 73175081 - Mroh5 protein_coding retained_intron MGP_WSBEiJ_T0012768.1 MGP_WSBEiJ_G0010898.1 mouse_genomes_project 15 22409853 22410954 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041056.1 MGP_WSBEiJ_G0021461.1 mouse_genomes_project 15 83249667 83356629 - MGP_WSBEiJ_P0041056 Tcf20 protein_coding protein_coding MGP_WSBEiJ_T0041057.1 MGP_WSBEiJ_G0021461.1 mouse_genomes_project 15 83249667 83356629 - MGP_WSBEiJ_P0041057 Tcf20 protein_coding protein_coding MGP_WSBEiJ_T0003561.1 MGP_WSBEiJ_G0003228.1 mouse_genomes_project 15 101219909 101236107 + Gm17058 antisense antisense MGP_WSBEiJ_T0039623.1 MGP_WSBEiJ_G0021017.1 mouse_genomes_project 15 4116876 4307710 - MGP_WSBEiJ_P0039623 Egflam protein_coding protein_coding MGP_WSBEiJ_T0039624.1 MGP_WSBEiJ_G0021017.1 mouse_genomes_project 15 4117334 4307757 - MGP_WSBEiJ_P0039624 Egflam protein_coding protein_coding MGP_WSBEiJ_T0039625.1 MGP_WSBEiJ_G0021017.1 mouse_genomes_project 15 4117339 4307801 - MGP_WSBEiJ_P0039625 Egflam protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039626.1 MGP_WSBEiJ_G0021017.1 mouse_genomes_project 15 4123978 4134847 - Egflam protein_coding retained_intron MGP_WSBEiJ_T0039627.1 MGP_WSBEiJ_G0021017.1 mouse_genomes_project 15 4145989 4307675 - Egflam protein_coding retained_intron MGP_WSBEiJ_T0039628.1 MGP_WSBEiJ_G0021017.1 mouse_genomes_project 15 4170395 4171653 - Egflam protein_coding processed_transcript MGP_WSBEiJ_T0039629.1 MGP_WSBEiJ_G0021017.1 mouse_genomes_project 15 4219369 4307667 - Egflam protein_coding retained_intron MGP_WSBEiJ_T0040318.1 MGP_WSBEiJ_G0021252.1 mouse_genomes_project 15 74216001 74231371 - MGP_WSBEiJ_P0040318 protein_coding protein_coding MGP_WSBEiJ_T0039812.1 MGP_WSBEiJ_G0021072.1 mouse_genomes_project 15 25508449 25536291 - MGP_WSBEiJ_P0039812 Fam105a protein_coding unknown_likely_coding MGP_WSBEiJ_T0039813.1 MGP_WSBEiJ_G0021072.1 mouse_genomes_project 15 25508457 25536382 - MGP_WSBEiJ_P0039813 Fam105a protein_coding protein_coding MGP_WSBEiJ_T0003522.1 MGP_WSBEiJ_G0003198.1 mouse_genomes_project 15 35404314 35405553 - Gm16136 antisense antisense MGP_WSBEiJ_T0003523.1 MGP_WSBEiJ_G0003198.1 mouse_genomes_project 15 35404332 35405703 - Gm16136 antisense antisense MGP_WSBEiJ_T0003524.1 MGP_WSBEiJ_G0003198.1 mouse_genomes_project 15 35405048 35405535 - Gm16136 antisense antisense MGP_WSBEiJ_T0099140.1 MGP_WSBEiJ_G0037803.1 mouse_genomes_project 15 20901510 20901642 + Gm24656 snoRNA snoRNA MGP_WSBEiJ_T0040672.1 MGP_WSBEiJ_G0021349.1 mouse_genomes_project 15 78125273 78138375 - MGP_WSBEiJ_P0040672 Pvalb protein_coding protein_coding MGP_WSBEiJ_T0040673.1 MGP_WSBEiJ_G0021349.1 mouse_genomes_project 15 78125276 78140538 - MGP_WSBEiJ_P0040673 Pvalb protein_coding protein_coding MGP_WSBEiJ_T0041368.1 MGP_WSBEiJ_G0021552.1 mouse_genomes_project 15 92061761 92109458 - MGP_WSBEiJ_P0041368 Abcd2 protein_coding protein_coding MGP_WSBEiJ_T0009888.1 MGP_WSBEiJ_G0008045.1 mouse_genomes_project 15 44794679 44794747 - Gm23562 miRNA miRNA MGP_WSBEiJ_T0041524.1 MGP_WSBEiJ_G0021600.1 mouse_genomes_project 15 99722440 99723542 - MGP_WSBEiJ_P0041524 Olfr283 protein_coding protein_coding MGP_WSBEiJ_T0040372.1 MGP_WSBEiJ_G0021270.1 mouse_genomes_project 15 75451746 75456777 + MGP_WSBEiJ_P0040372 Gsdmd protein_coding protein_coding MGP_WSBEiJ_T0041776.1 MGP_WSBEiJ_G0021685.1 mouse_genomes_project 15 103148050 103161051 + MGP_WSBEiJ_P0041776 Krt86 protein_coding protein_coding MGP_WSBEiJ_T0006640.1 MGP_WSBEiJ_G0005488.1 mouse_genomes_project 15 7808907 7878190 + 4930556M19Rik lincRNA lincRNA MGP_WSBEiJ_T0016879.1 MGP_WSBEiJ_G0014725.1 mouse_genomes_project 15 79832184 79834398 + Gm16575 processed_transcript processed_transcript MGP_WSBEiJ_T0041163.1 MGP_WSBEiJ_G0021493.1 mouse_genomes_project 15 85622611 85648825 + MGP_WSBEiJ_P0041163 Fam118a protein_coding protein_coding MGP_WSBEiJ_T0040359.1 MGP_WSBEiJ_G0021265.1 mouse_genomes_project 15 75193362 75201992 + MGP_WSBEiJ_P0040359 Zfp41 protein_coding protein_coding MGP_WSBEiJ_T0040360.1 MGP_WSBEiJ_G0021265.1 mouse_genomes_project 15 75193367 75201985 + MGP_WSBEiJ_P0040360 Zfp41 protein_coding protein_coding MGP_WSBEiJ_T0040361.1 MGP_WSBEiJ_G0021265.1 mouse_genomes_project 15 75193419 75195338 + MGP_WSBEiJ_P0040361 Zfp41 protein_coding protein_coding MGP_WSBEiJ_T0040362.1 MGP_WSBEiJ_G0021265.1 mouse_genomes_project 15 75198404 75200522 + Zfp41 protein_coding processed_transcript MGP_WSBEiJ_T0040307.1 MGP_WSBEiJ_G0021247.1 mouse_genomes_project 15 74126158 74127723 - MGP_WSBEiJ_P0040307 Ly6d protein_coding protein_coding MGP_WSBEiJ_T0039887.1 MGP_WSBEiJ_G0021101.1 mouse_genomes_project 15 33467877 34052265 + MGP_WSBEiJ_P0039887 Vps13b protein_coding protein_coding MGP_WSBEiJ_T0012758.1 MGP_WSBEiJ_G0010888.1 mouse_genomes_project 15 597003 597987 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040005.1 MGP_WSBEiJ_G0021148.1 mouse_genomes_project 15 45952317 47264388 - MGP_WSBEiJ_P0040005 Csmd3 protein_coding protein_coding MGP_WSBEiJ_T0040006.1 MGP_WSBEiJ_G0021148.1 mouse_genomes_project 15 45952318 47264444 - MGP_WSBEiJ_P0040006 Csmd3 protein_coding protein_coding MGP_WSBEiJ_T0040007.1 MGP_WSBEiJ_G0021148.1 mouse_genomes_project 15 45952402 47264518 - MGP_WSBEiJ_P0040007 Csmd3 protein_coding protein_coding MGP_WSBEiJ_T0040008.1 MGP_WSBEiJ_G0021148.1 mouse_genomes_project 15 45953403 46415305 - MGP_WSBEiJ_P0040008 Csmd3 protein_coding protein_coding MGP_WSBEiJ_T0040009.1 MGP_WSBEiJ_G0021148.1 mouse_genomes_project 15 46007827 46013807 - Csmd3 protein_coding retained_intron MGP_WSBEiJ_T0040010.1 MGP_WSBEiJ_G0021148.1 mouse_genomes_project 15 46356827 46371606 - Csmd3 protein_coding retained_intron MGP_WSBEiJ_T0040011.1 MGP_WSBEiJ_G0021148.1 mouse_genomes_project 15 46684242 47264444 - Csmd3 protein_coding processed_transcript MGP_WSBEiJ_T0040012.1 MGP_WSBEiJ_G0021148.1 mouse_genomes_project 15 46710872 47264444 - Csmd3 protein_coding retained_intron MGP_WSBEiJ_T0099172.1 MGP_WSBEiJ_G0037835.1 mouse_genomes_project 15 84867047 84867191 - Gm22890 snoRNA snoRNA MGP_WSBEiJ_T0039997.1 MGP_WSBEiJ_G0021144.1 mouse_genomes_project 15 42739033 42888703 + MGP_WSBEiJ_P0039997 Pkhd1l1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039998.1 MGP_WSBEiJ_G0021144.1 mouse_genomes_project 15 42739033 42884702 + MGP_WSBEiJ_P0039998 Pkhd1l1 protein_coding protein_coding MGP_WSBEiJ_T0039999.1 MGP_WSBEiJ_G0021144.1 mouse_genomes_project 15 42739033 42884696 + MGP_WSBEiJ_P0039999 Pkhd1l1 protein_coding protein_coding MGP_WSBEiJ_T0040633.1 MGP_WSBEiJ_G0021332.1 mouse_genomes_project 15 77088381 77116658 - MGP_WSBEiJ_P0040633 protein_coding protein_coding MGP_WSBEiJ_T0040634.1 MGP_WSBEiJ_G0021332.1 mouse_genomes_project 15 77088382 77116634 - MGP_WSBEiJ_P0040634 protein_coding protein_coding MGP_WSBEiJ_T0040636.1 MGP_WSBEiJ_G0021332.1 mouse_genomes_project 15 77089117 77103209 - MGP_WSBEiJ_P0040636 protein_coding protein_coding MGP_WSBEiJ_T0040637.1 MGP_WSBEiJ_G0021332.1 mouse_genomes_project 15 77095294 77103685 - protein_coding retained_intron MGP_WSBEiJ_T0040638.1 MGP_WSBEiJ_G0021332.1 mouse_genomes_project 15 77095376 77117343 - MGP_WSBEiJ_P0040638 protein_coding protein_coding MGP_WSBEiJ_T0039633.1 MGP_WSBEiJ_G0021021.1 mouse_genomes_project 15 5104675 5188881 + MGP_WSBEiJ_P0039633 2410089E03Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0039634.1 MGP_WSBEiJ_G0021021.1 mouse_genomes_project 15 5104722 5224825 + MGP_WSBEiJ_P0039634 2410089E03Rik protein_coding protein_coding MGP_WSBEiJ_T0039635.1 MGP_WSBEiJ_G0021021.1 mouse_genomes_project 15 5128296 5129151 + 2410089E03Rik protein_coding retained_intron MGP_WSBEiJ_T0039636.1 MGP_WSBEiJ_G0021021.1 mouse_genomes_project 15 5136386 5147899 + 2410089E03Rik protein_coding retained_intron MGP_WSBEiJ_T0039637.1 MGP_WSBEiJ_G0021021.1 mouse_genomes_project 15 5161540 5164203 + 2410089E03Rik protein_coding retained_intron MGP_WSBEiJ_T0039638.1 MGP_WSBEiJ_G0021021.1 mouse_genomes_project 15 5190951 5197771 + MGP_WSBEiJ_P0039638 2410089E03Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0039639.1 MGP_WSBEiJ_G0021021.1 mouse_genomes_project 15 5197793 5224833 + MGP_WSBEiJ_P0039639 2410089E03Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0039640.1 MGP_WSBEiJ_G0021021.1 mouse_genomes_project 15 5198070 5204870 + 2410089E03Rik protein_coding retained_intron MGP_WSBEiJ_T0040509.1 MGP_WSBEiJ_G0021300.1 mouse_genomes_project 15 76007046 76010027 - MGP_WSBEiJ_P0040509 Tssk5 protein_coding protein_coding MGP_WSBEiJ_T0040108.1 MGP_WSBEiJ_G0021181.1 mouse_genomes_project 15 56927342 56970111 - MGP_WSBEiJ_P0040108 Atad2 protein_coding protein_coding MGP_WSBEiJ_T0006690.1 MGP_WSBEiJ_G0005521.1 mouse_genomes_project 15 83834390 83845078 - 1700001L05Rik lincRNA lincRNA MGP_WSBEiJ_T0006691.1 MGP_WSBEiJ_G0005521.1 mouse_genomes_project 15 83834398 83844807 - 1700001L05Rik lincRNA lincRNA MGP_WSBEiJ_T0006692.1 MGP_WSBEiJ_G0005521.1 mouse_genomes_project 15 83834424 83845073 - 1700001L05Rik lincRNA lincRNA MGP_WSBEiJ_T0006693.1 MGP_WSBEiJ_G0005521.1 mouse_genomes_project 15 83835482 83842938 - 1700001L05Rik lincRNA lincRNA MGP_WSBEiJ_T0003555.1 MGP_WSBEiJ_G0003222.1 mouse_genomes_project 15 99058017 99060179 + Rapgef3os2 antisense antisense MGP_WSBEiJ_T0041169.1 MGP_WSBEiJ_G0021497.1 mouse_genomes_project 15 85937887 86072733 + MGP_WSBEiJ_P0041169 Atxn10 protein_coding protein_coding MGP_WSBEiJ_T0006661.1 MGP_WSBEiJ_G0005505.1 mouse_genomes_project 15 43076989 43088769 + lincRNA lincRNA MGP_WSBEiJ_T0100025.1 MGP_WSBEiJ_G0038658.1 mouse_genomes_project 15 79305788 79306307 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0040702.1 MGP_WSBEiJ_G0021358.1 mouse_genomes_project 15 78526351 78533699 - MGP_WSBEiJ_P0040702 Sstr3 protein_coding protein_coding MGP_WSBEiJ_T0040613.1 MGP_WSBEiJ_G0021325.1 mouse_genomes_project 15 76578579 76579975 + MGP_WSBEiJ_P0040613 Commd5 protein_coding protein_coding MGP_WSBEiJ_T0040614.1 MGP_WSBEiJ_G0021325.1 mouse_genomes_project 15 76578605 76579861 + MGP_WSBEiJ_P0040614 Commd5 protein_coding protein_coding MGP_WSBEiJ_T0003547.1 MGP_WSBEiJ_G0003216.1 mouse_genomes_project 15 83343783 83350274 + Gm20324 antisense antisense MGP_WSBEiJ_T0012779.1 MGP_WSBEiJ_G0010909.1 mouse_genomes_project 15 39362663 39362837 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039577.1 MGP_WSBEiJ_G0021005.1 mouse_genomes_project 15 1922180 1937798 - MGP_WSBEiJ_P0039577 Card6 protein_coding protein_coding MGP_WSBEiJ_T0039578.1 MGP_WSBEiJ_G0021005.1 mouse_genomes_project 15 1934361 1937743 - MGP_WSBEiJ_P0039578 Card6 protein_coding protein_coding MGP_WSBEiJ_T0040043.1 MGP_WSBEiJ_G0021163.1 mouse_genomes_project 15 53554009 53641274 - MGP_WSBEiJ_P0040043 Enpp2 protein_coding protein_coding MGP_WSBEiJ_T0040044.1 MGP_WSBEiJ_G0021163.1 mouse_genomes_project 15 53554012 53641130 - MGP_WSBEiJ_P0040044 Enpp2 protein_coding protein_coding MGP_WSBEiJ_T0040045.1 MGP_WSBEiJ_G0021163.1 mouse_genomes_project 15 53554382 53641146 - MGP_WSBEiJ_P0040045 Enpp2 protein_coding protein_coding MGP_WSBEiJ_T0040046.1 MGP_WSBEiJ_G0021163.1 mouse_genomes_project 15 53554479 53641089 - MGP_WSBEiJ_P0040046 Enpp2 protein_coding protein_coding MGP_WSBEiJ_T0009904.1 MGP_WSBEiJ_G0008061.1 mouse_genomes_project 15 79437914 79437987 - Mir1943 miRNA miRNA MGP_WSBEiJ_T0039641.1 MGP_WSBEiJ_G0021022.1 mouse_genomes_project 15 5244245 5405773 - MGP_WSBEiJ_P0039641 Nipbl protein_coding protein_coding MGP_WSBEiJ_T0040423.1 MGP_WSBEiJ_G0021285.1 mouse_genomes_project 15 75688655 75694564 - MGP_WSBEiJ_P0040423 protein_coding protein_coding MGP_WSBEiJ_T0040987.1 MGP_WSBEiJ_G0021433.1 mouse_genomes_project 15 82140380 82146468 - MGP_WSBEiJ_P0040987 Phf5a protein_coding unknown_likely_coding MGP_WSBEiJ_T0006682.1 MGP_WSBEiJ_G0005514.1 mouse_genomes_project 15 77886136 77891595 + Gm17638 lincRNA lincRNA MGP_WSBEiJ_T0041468.1 MGP_WSBEiJ_G0021585.1 mouse_genomes_project 15 99075577 99083902 + MGP_WSBEiJ_P0041468 Slc48a1 protein_coding protein_coding MGP_WSBEiJ_T0041469.1 MGP_WSBEiJ_G0021585.1 mouse_genomes_project 15 99075650 99081177 + MGP_WSBEiJ_P0041469 Slc48a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003559.1 MGP_WSBEiJ_G0003226.1 mouse_genomes_project 15 100859906 100868696 + Nckap5los antisense antisense MGP_WSBEiJ_T0041447.1 MGP_WSBEiJ_G0021581.1 mouse_genomes_project 15 98509803 98662016 + MGP_WSBEiJ_P0041447 Pced1b protein_coding protein_coding MGP_WSBEiJ_T0040111.1 MGP_WSBEiJ_G0021184.1 mouse_genomes_project 15 57161055 57170730 - MGP_WSBEiJ_P0040111 Klhl38 protein_coding protein_coding MGP_WSBEiJ_T0041162.1 MGP_WSBEiJ_G0021492.1 mouse_genomes_project 15 85599666 85604895 + MGP_WSBEiJ_P0041162 Upk3a protein_coding protein_coding MGP_WSBEiJ_T0041391.1 MGP_WSBEiJ_G0021558.1 mouse_genomes_project 15 93394248 93776596 + MGP_WSBEiJ_P0041391 Pdzrn4 protein_coding protein_coding MGP_WSBEiJ_T0041392.1 MGP_WSBEiJ_G0021558.1 mouse_genomes_project 15 93608030 93776596 + MGP_WSBEiJ_P0041392 Pdzrn4 protein_coding protein_coding MGP_WSBEiJ_T0100346.1 MGP_WSBEiJ_G0038829.1 mouse_genomes_project 15 62999492 63000999 + unitary_pseudogene retained_intron MGP_WSBEiJ_T0012762.1 MGP_WSBEiJ_G0010892.1 mouse_genomes_project 15 5918805 5919625 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039816.1 MGP_WSBEiJ_G0021074.1 mouse_genomes_project 15 26020454 26179525 + MGP_WSBEiJ_P0039816 Dnah5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039817.1 MGP_WSBEiJ_G0021074.1 mouse_genomes_project 15 26072046 26354113 + MGP_WSBEiJ_P0039817 Dnah5 protein_coding protein_coding MGP_WSBEiJ_T0041538.1 MGP_WSBEiJ_G0021606.1 mouse_genomes_project 15 99872317 99887785 - MGP_WSBEiJ_P0041538 Kansl2 protein_coding protein_coding MGP_WSBEiJ_T0041539.1 MGP_WSBEiJ_G0021606.1 mouse_genomes_project 15 99872597 99887762 - MGP_WSBEiJ_P0041539 Kansl2 protein_coding protein_coding MGP_WSBEiJ_T0011192.1 MGP_WSBEiJ_G0009349.1 mouse_genomes_project 15 75882657 75882942 - Mirt2 misc_RNA misc_RNA MGP_WSBEiJ_T0041941.1 MGP_WSBEiJ_G0021747.1 mouse_genomes_project 15 105129976 105132170 - MGP_WSBEiJ_P0041941 Gpr84 protein_coding protein_coding MGP_WSBEiJ_T0039994.1 MGP_WSBEiJ_G0021142.1 mouse_genomes_project 15 42656073 42707091 - MGP_WSBEiJ_P0039994 Nudcd1 protein_coding protein_coding MGP_WSBEiJ_T0039995.1 MGP_WSBEiJ_G0021142.1 mouse_genomes_project 15 42657241 42706646 - MGP_WSBEiJ_P0039995 Nudcd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041074.1 MGP_WSBEiJ_G0021464.1 mouse_genomes_project 15 83576239 83582490 - MGP_WSBEiJ_P0041074 Rrp7a protein_coding protein_coding MGP_WSBEiJ_T0041075.1 MGP_WSBEiJ_G0021464.1 mouse_genomes_project 15 83576973 83578092 - Rrp7a protein_coding retained_intron MGP_WSBEiJ_T0041076.1 MGP_WSBEiJ_G0021464.1 mouse_genomes_project 15 83578991 83581873 - MGP_WSBEiJ_P0041076 Rrp7a protein_coding protein_coding MGP_WSBEiJ_T0041077.1 MGP_WSBEiJ_G0021464.1 mouse_genomes_project 15 83579017 83582466 - MGP_WSBEiJ_P0041077 Rrp7a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003530.1 MGP_WSBEiJ_G0003204.1 mouse_genomes_project 15 65171921 65192345 + Gm27153 antisense antisense MGP_WSBEiJ_T0000906.1 MGP_WSBEiJ_G0000844.1 mouse_genomes_project 15 17791581 17793937 - TEC TEC MGP_WSBEiJ_T0041774.1 MGP_WSBEiJ_G0021683.1 mouse_genomes_project 15 103114254 103120633 + MGP_WSBEiJ_P0041774 Krt88 protein_coding protein_coding MGP_WSBEiJ_T0040204.1 MGP_WSBEiJ_G0021218.1 mouse_genomes_project 15 65899103 65951544 - MGP_WSBEiJ_P0040204 Sla protein_coding protein_coding MGP_WSBEiJ_T0040205.1 MGP_WSBEiJ_G0021218.1 mouse_genomes_project 15 65899148 65932697 - MGP_WSBEiJ_P0040205 Sla protein_coding protein_coding MGP_WSBEiJ_T0040206.1 MGP_WSBEiJ_G0021218.1 mouse_genomes_project 15 65900362 65921043 - MGP_WSBEiJ_P0040206 Sla protein_coding protein_coding MGP_WSBEiJ_T0040207.1 MGP_WSBEiJ_G0021218.1 mouse_genomes_project 15 65900826 65951727 - MGP_WSBEiJ_P0040207 Sla protein_coding protein_coding MGP_WSBEiJ_T0040208.1 MGP_WSBEiJ_G0021218.1 mouse_genomes_project 15 65904004 65923202 - Sla protein_coding retained_intron MGP_WSBEiJ_T0009930.1 MGP_WSBEiJ_G0008087.1 mouse_genomes_project 15 99873259 99873376 - Mir1291 miRNA miRNA MGP_WSBEiJ_T0016877.1 MGP_WSBEiJ_G0014723.1 mouse_genomes_project 15 78053962 78078352 + A730060N03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0041508.1 MGP_WSBEiJ_G0021592.1 mouse_genomes_project 15 99439966 99470227 - MGP_WSBEiJ_P0041508 Asb8 protein_coding protein_coding MGP_WSBEiJ_T0041509.1 MGP_WSBEiJ_G0021592.1 mouse_genomes_project 15 99441043 99450568 - MGP_WSBEiJ_P0041509 Asb8 protein_coding protein_coding MGP_WSBEiJ_T0041510.1 MGP_WSBEiJ_G0021592.1 mouse_genomes_project 15 99441043 99450521 - MGP_WSBEiJ_P0041510 Asb8 protein_coding protein_coding MGP_WSBEiJ_T0041511.1 MGP_WSBEiJ_G0021592.1 mouse_genomes_project 15 99441043 99470162 - MGP_WSBEiJ_P0041511 Asb8 protein_coding protein_coding MGP_WSBEiJ_T0040611.1 MGP_WSBEiJ_G0021323.1 mouse_genomes_project 15 76525597 76547621 - MGP_WSBEiJ_P0040611 Zfp251 protein_coding protein_coding MGP_WSBEiJ_T0040896.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141272 81163690 + MGP_WSBEiJ_P0040896 Adsl protein_coding protein_coding MGP_WSBEiJ_T0040897.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141273 81161751 + MGP_WSBEiJ_P0040897 Adsl protein_coding protein_coding MGP_WSBEiJ_T0040898.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141286 81142887 + Adsl protein_coding retained_intron MGP_WSBEiJ_T0040899.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141294 81161862 + MGP_WSBEiJ_P0040899 Adsl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040900.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141301 81161491 + MGP_WSBEiJ_P0040900 Adsl protein_coding protein_coding MGP_WSBEiJ_T0040901.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141301 81157232 + MGP_WSBEiJ_P0040901 Adsl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040902.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141319 81158866 + MGP_WSBEiJ_P0040902 Adsl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040903.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141324 81149157 + Adsl protein_coding retained_intron MGP_WSBEiJ_T0040904.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81141559 81145557 + MGP_WSBEiJ_P0040904 Adsl protein_coding protein_coding MGP_WSBEiJ_T0040905.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81154475 81157107 + Adsl protein_coding retained_intron MGP_WSBEiJ_T0040906.1 MGP_WSBEiJ_G0021415.1 mouse_genomes_project 15 81157185 81161498 + MGP_WSBEiJ_P0040906 Adsl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041721.1 MGP_WSBEiJ_G0021671.1 mouse_genomes_project 15 102275604 102315603 - MGP_WSBEiJ_P0041721 Galnt6 protein_coding protein_coding MGP_WSBEiJ_T0041722.1 MGP_WSBEiJ_G0021671.1 mouse_genomes_project 15 102275606 102315603 - MGP_WSBEiJ_P0041722 Galnt6 protein_coding protein_coding MGP_WSBEiJ_T0041723.1 MGP_WSBEiJ_G0021671.1 mouse_genomes_project 15 102276655 102306798 - MGP_WSBEiJ_P0041723 Galnt6 protein_coding protein_coding MGP_WSBEiJ_T0011191.1 MGP_WSBEiJ_G0009348.1 mouse_genomes_project 15 61190281 61190408 + Gm27957 misc_RNA misc_RNA MGP_WSBEiJ_T0097291.1 MGP_WSBEiJ_G0035968.1 mouse_genomes_project 15 72080415 72085130 - Peg13 sense_intronic sense_intronic MGP_WSBEiJ_T0041027.1 MGP_WSBEiJ_G0021442.1 mouse_genomes_project 15 82427551 82443237 + MGP_WSBEiJ_P0041027 Ccdc134 protein_coding protein_coding MGP_WSBEiJ_T0040881.1 MGP_WSBEiJ_G0021406.1 mouse_genomes_project 15 80315892 80360678 + MGP_WSBEiJ_P0040881 Mgat3 protein_coding protein_coding MGP_WSBEiJ_T0096968.1 MGP_WSBEiJ_G0035649.1 mouse_genomes_project 15 28538149 28538268 + Gm23956 rRNA rRNA MGP_WSBEiJ_T0041775.1 MGP_WSBEiJ_G0021684.1 mouse_genomes_project 15 103127328 103136297 - MGP_WSBEiJ_P0041775 Krt81 protein_coding protein_coding MGP_WSBEiJ_T0006654.1 MGP_WSBEiJ_G0005498.1 mouse_genomes_project 15 36617000 36618324 + Gm26863 lincRNA lincRNA MGP_WSBEiJ_T0009907.1 MGP_WSBEiJ_G0008064.1 mouse_genomes_project 15 80119154 80119245 - Mir7213 miRNA miRNA MGP_WSBEiJ_T0011184.1 MGP_WSBEiJ_G0009341.1 mouse_genomes_project 15 9121656 9121916 + Gm24074 misc_RNA misc_RNA MGP_WSBEiJ_T0041048.1 MGP_WSBEiJ_G0021453.1 mouse_genomes_project 15 82682576 82686709 - MGP_WSBEiJ_P0041048 Ndufa6 protein_coding protein_coding MGP_WSBEiJ_T0041040.1 MGP_WSBEiJ_G0021452.1 mouse_genomes_project 15 82668075 82681494 + Smdt1 protein_coding processed_transcript MGP_WSBEiJ_T0041043.1 MGP_WSBEiJ_G0021452.1 mouse_genomes_project 15 82670102 82681442 + Smdt1 protein_coding processed_transcript MGP_WSBEiJ_T0041045.1 MGP_WSBEiJ_G0021452.1 mouse_genomes_project 15 82678388 82681525 + MGP_WSBEiJ_P0041045 Smdt1 protein_coding protein_coding MGP_WSBEiJ_T0041046.1 MGP_WSBEiJ_G0021452.1 mouse_genomes_project 15 82678448 82681526 + MGP_WSBEiJ_P0041046 Smdt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041047.1 MGP_WSBEiJ_G0021452.1 mouse_genomes_project 15 82679654 82681304 + MGP_WSBEiJ_P0041047 Smdt1 protein_coding protein_coding MGP_WSBEiJ_T0040040.1 MGP_WSBEiJ_G0021160.1 mouse_genomes_project 15 53124564 53181409 + MGP_WSBEiJ_P0040040 Colec10 protein_coding protein_coding MGP_WSBEiJ_T0006687.1 MGP_WSBEiJ_G0005519.1 mouse_genomes_project 15 83429097 83434072 - Gm29019 lincRNA lincRNA MGP_WSBEiJ_T0006688.1 MGP_WSBEiJ_G0005519.1 mouse_genomes_project 15 83429154 83433954 - Gm29019 lincRNA lincRNA MGP_WSBEiJ_T0097290.1 MGP_WSBEiJ_G0035967.1 mouse_genomes_project 15 35951130 35954445 - Gm15940 sense_intronic sense_intronic MGP_WSBEiJ_T0040584.1 MGP_WSBEiJ_G0021317.1 mouse_genomes_project 15 76358539 76361449 + MGP_WSBEiJ_P0040584 Gpt protein_coding protein_coding MGP_WSBEiJ_T0041658.1 MGP_WSBEiJ_G0021650.1 mouse_genomes_project 15 101187958 101226288 - MGP_WSBEiJ_P0041658 Cers5 protein_coding protein_coding MGP_WSBEiJ_T0041659.1 MGP_WSBEiJ_G0021650.1 mouse_genomes_project 15 101188388 101226291 - MGP_WSBEiJ_P0041659 Cers5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041660.1 MGP_WSBEiJ_G0021650.1 mouse_genomes_project 15 101188669 101226427 - MGP_WSBEiJ_P0041660 Cers5 protein_coding protein_coding MGP_WSBEiJ_T0041661.1 MGP_WSBEiJ_G0021650.1 mouse_genomes_project 15 101190412 101200090 - MGP_WSBEiJ_P0041661 Cers5 protein_coding protein_coding MGP_WSBEiJ_T0041662.1 MGP_WSBEiJ_G0021650.1 mouse_genomes_project 15 101192485 101226711 - MGP_WSBEiJ_P0041662 Cers5 protein_coding protein_coding MGP_WSBEiJ_T0041663.1 MGP_WSBEiJ_G0021650.1 mouse_genomes_project 15 101199019 101225918 - MGP_WSBEiJ_P0041663 Cers5 protein_coding protein_coding MGP_WSBEiJ_T0041434.1 MGP_WSBEiJ_G0021574.1 mouse_genomes_project 15 97487006 97568505 + MGP_WSBEiJ_P0041434 Arid2 protein_coding protein_coding MGP_WSBEiJ_T0041435.1 MGP_WSBEiJ_G0021574.1 mouse_genomes_project 15 97487061 97622557 + MGP_WSBEiJ_P0041435 Arid2 protein_coding protein_coding MGP_WSBEiJ_T0041436.1 MGP_WSBEiJ_G0021574.1 mouse_genomes_project 15 97573306 97576281 + Arid2 protein_coding retained_intron MGP_WSBEiJ_T0041437.1 MGP_WSBEiJ_G0021574.1 mouse_genomes_project 15 97589273 97621166 + Arid2 protein_coding retained_intron MGP_WSBEiJ_T0041387.1 MGP_WSBEiJ_G0021557.1 mouse_genomes_project 15 93016542 93234169 + Cntn1 protein_coding retained_intron MGP_WSBEiJ_T0041388.1 MGP_WSBEiJ_G0021557.1 mouse_genomes_project 15 93016542 93331143 + MGP_WSBEiJ_P0041388 Cntn1 protein_coding protein_coding MGP_WSBEiJ_T0041389.1 MGP_WSBEiJ_G0021557.1 mouse_genomes_project 15 93102345 93331129 + MGP_WSBEiJ_P0041389 Cntn1 protein_coding protein_coding MGP_WSBEiJ_T0041390.1 MGP_WSBEiJ_G0021557.1 mouse_genomes_project 15 93136037 93329293 + MGP_WSBEiJ_P0041390 Cntn1 protein_coding protein_coding MGP_WSBEiJ_T0041515.1 MGP_WSBEiJ_G0021595.1 mouse_genomes_project 15 99514332 99529808 - MGP_WSBEiJ_P0041515 protein_coding protein_coding MGP_WSBEiJ_T0041516.1 MGP_WSBEiJ_G0021595.1 mouse_genomes_project 15 99516635 99529708 - protein_coding processed_transcript MGP_WSBEiJ_T0040021.1 MGP_WSBEiJ_G0021150.1 mouse_genomes_project 15 50418611 50499277 - MGP_WSBEiJ_P0040021 Eif3h protein_coding protein_coding MGP_WSBEiJ_T0003527.1 MGP_WSBEiJ_G0003201.1 mouse_genomes_project 15 54172320 54175226 - 1700040F17Rik antisense antisense MGP_WSBEiJ_T0041158.1 MGP_WSBEiJ_G0021490.1 mouse_genomes_project 15 85496181 85516217 + MGP_WSBEiJ_P0041158 Nup50 protein_coding protein_coding MGP_WSBEiJ_T0041489.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99275310 99305961 - MGP_WSBEiJ_P0041489 Col2a1 protein_coding protein_coding MGP_WSBEiJ_T0041490.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99275310 99305923 - MGP_WSBEiJ_P0041490 Col2a1 protein_coding protein_coding MGP_WSBEiJ_T0041491.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99286061 99288700 - Col2a1 protein_coding retained_intron MGP_WSBEiJ_T0041492.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99287889 99290232 - Col2a1 protein_coding processed_transcript MGP_WSBEiJ_T0041493.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99296109 99300710 - Col2a1 protein_coding retained_intron MGP_WSBEiJ_T0041494.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99296260 99300938 - Col2a1 protein_coding processed_transcript MGP_WSBEiJ_T0041495.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99299615 99303133 - Col2a1 protein_coding processed_transcript MGP_WSBEiJ_T0041496.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99299822 99305901 - MGP_WSBEiJ_P0041496 Col2a1 protein_coding protein_coding MGP_WSBEiJ_T0041497.1 MGP_WSBEiJ_G0021589.1 mouse_genomes_project 15 99301487 99305923 - Col2a1 protein_coding retained_intron MGP_WSBEiJ_T0039830.1 MGP_WSBEiJ_G0021080.1 mouse_genomes_project 15 29435352 29502163 - MGP_WSBEiJ_P0039830 March6 protein_coding protein_coding MGP_WSBEiJ_T0039949.1 MGP_WSBEiJ_G0021120.1 mouse_genomes_project 15 36519466 36527167 - MGP_WSBEiJ_P0039949 Klf10 protein_coding protein_coding MGP_WSBEiJ_T0039886.1 MGP_WSBEiJ_G0021100.1 mouse_genomes_project 15 33375445 33382655 + MGP_WSBEiJ_P0039886 Osr2 protein_coding protein_coding MGP_WSBEiJ_T0040777.1 MGP_WSBEiJ_G0021380.1 mouse_genomes_project 15 79301225 79304976 - MGP_WSBEiJ_P0040777 Slc16a8 protein_coding protein_coding MGP_WSBEiJ_T0006710.1 MGP_WSBEiJ_G0005533.1 mouse_genomes_project 15 102191391 102192362 - C330013E15Rik lincRNA lincRNA MGP_WSBEiJ_T0097883.1 MGP_WSBEiJ_G0036546.1 mouse_genomes_project 15 1860524 1860627 + Gm25652 snRNA snRNA MGP_WSBEiJ_T0040396.1 MGP_WSBEiJ_G0021277.1 mouse_genomes_project 15 75533334 75541770 + MGP_WSBEiJ_P0040396 Zfp623 protein_coding protein_coding MGP_WSBEiJ_T0041098.1 MGP_WSBEiJ_G0021474.1 mouse_genomes_project 15 84067038 84089929 - MGP_WSBEiJ_P0041098 Ttll12 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041099.1 MGP_WSBEiJ_G0021474.1 mouse_genomes_project 15 84067563 84089929 - MGP_WSBEiJ_P0041099 Ttll12 protein_coding protein_coding MGP_WSBEiJ_T0041100.1 MGP_WSBEiJ_G0021474.1 mouse_genomes_project 15 84073707 84078833 - Ttll12 protein_coding retained_intron MGP_WSBEiJ_T0041449.1 MGP_WSBEiJ_G0021583.1 mouse_genomes_project 15 99002521 99022882 - MGP_WSBEiJ_P0041449 Endou protein_coding protein_coding MGP_WSBEiJ_T0041450.1 MGP_WSBEiJ_G0021583.1 mouse_genomes_project 15 99002521 99012627 - MGP_WSBEiJ_P0041450 Endou protein_coding protein_coding MGP_WSBEiJ_T0041438.1 MGP_WSBEiJ_G0021575.1 mouse_genomes_project 15 97631394 97682381 - MGP_WSBEiJ_P0041438 Scaf11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041439.1 MGP_WSBEiJ_G0021575.1 mouse_genomes_project 15 97631396 97682429 - MGP_WSBEiJ_P0041439 Scaf11 protein_coding protein_coding MGP_WSBEiJ_T0040813.1 MGP_WSBEiJ_G0021389.1 mouse_genomes_project 15 79637611 79690303 - MGP_WSBEiJ_P0040813 Dmc1 protein_coding protein_coding MGP_WSBEiJ_T0041669.1 MGP_WSBEiJ_G0021653.1 mouse_genomes_project 15 101455223 101498609 + MGP_WSBEiJ_P0041669 Larp4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0097887.1 MGP_WSBEiJ_G0036550.1 mouse_genomes_project 15 21420336 21420494 - Gm23980 snRNA snRNA MGP_WSBEiJ_T0097900.1 MGP_WSBEiJ_G0036563.1 mouse_genomes_project 15 51173024 51173128 + Gm23545 snRNA snRNA MGP_WSBEiJ_T0041028.1 MGP_WSBEiJ_G0021443.1 mouse_genomes_project 15 82448083 82509589 + MGP_WSBEiJ_P0041028 Srebf2 protein_coding protein_coding MGP_WSBEiJ_T0039986.1 MGP_WSBEiJ_G0021136.1 mouse_genomes_project 15 40677979 40931421 - MGP_WSBEiJ_P0039986 Angpt1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039987.1 MGP_WSBEiJ_G0021136.1 mouse_genomes_project 15 40677983 40931937 - MGP_WSBEiJ_P0039987 Angpt1 protein_coding protein_coding MGP_WSBEiJ_T0039706.1 MGP_WSBEiJ_G0021037.1 mouse_genomes_project 15 7557066 7568067 - MGP_WSBEiJ_P0039706 Brix1 protein_coding protein_coding MGP_WSBEiJ_T0039707.1 MGP_WSBEiJ_G0021037.1 mouse_genomes_project 15 7561089 7567506 - MGP_WSBEiJ_P0039707 Brix1 protein_coding protein_coding MGP_WSBEiJ_T0039708.1 MGP_WSBEiJ_G0021037.1 mouse_genomes_project 15 7561470 7568029 - MGP_WSBEiJ_P0039708 Brix1 protein_coding protein_coding MGP_WSBEiJ_T0039709.1 MGP_WSBEiJ_G0021037.1 mouse_genomes_project 15 7561909 7568007 - MGP_WSBEiJ_P0039709 Brix1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041053.1 MGP_WSBEiJ_G0021458.1 mouse_genomes_project 15 83089422 83090790 - MGP_WSBEiJ_P0041053 Cyp2d37-ps protein_coding protein_coding MGP_WSBEiJ_T0040038.1 MGP_WSBEiJ_G0021158.1 mouse_genomes_project 15 52599108 52600800 + MGP_WSBEiJ_P0040038 Gm7489 protein_coding protein_coding MGP_WSBEiJ_T0012780.1 MGP_WSBEiJ_G0010910.1 mouse_genomes_project 15 41468419 41469431 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039915.1 MGP_WSBEiJ_G0021111.1 mouse_genomes_project 15 34931652 34955150 - MGP_WSBEiJ_P0039915 Ywhaz protein_coding protein_coding MGP_WSBEiJ_T0039916.1 MGP_WSBEiJ_G0021111.1 mouse_genomes_project 15 34936429 34954898 - Ywhaz protein_coding retained_intron MGP_WSBEiJ_T0039917.1 MGP_WSBEiJ_G0021111.1 mouse_genomes_project 15 34952089 34953793 - MGP_WSBEiJ_P0039917 Ywhaz protein_coding protein_coding MGP_WSBEiJ_T0039918.1 MGP_WSBEiJ_G0021111.1 mouse_genomes_project 15 34952221 34954589 - MGP_WSBEiJ_P0039918 Ywhaz protein_coding protein_coding MGP_WSBEiJ_T0039919.1 MGP_WSBEiJ_G0021111.1 mouse_genomes_project 15 34952276 34955926 - MGP_WSBEiJ_P0039919 Ywhaz protein_coding protein_coding MGP_WSBEiJ_T0040258.1 MGP_WSBEiJ_G0021232.1 mouse_genomes_project 15 72902015 72929976 - MGP_WSBEiJ_P0040258 Slc45a4 protein_coding protein_coding MGP_WSBEiJ_T0040259.1 MGP_WSBEiJ_G0021232.1 mouse_genomes_project 15 72902025 72949995 - MGP_WSBEiJ_P0040259 Slc45a4 protein_coding protein_coding MGP_WSBEiJ_T0040260.1 MGP_WSBEiJ_G0021232.1 mouse_genomes_project 15 72904889 72941822 - MGP_WSBEiJ_P0040260 Slc45a4 protein_coding protein_coding MGP_WSBEiJ_T0040261.1 MGP_WSBEiJ_G0021232.1 mouse_genomes_project 15 72904889 72929962 - MGP_WSBEiJ_P0040261 Slc45a4 protein_coding protein_coding MGP_WSBEiJ_T0040262.1 MGP_WSBEiJ_G0021232.1 mouse_genomes_project 15 72904892 72949995 - MGP_WSBEiJ_P0040262 Slc45a4 protein_coding protein_coding MGP_WSBEiJ_T0040263.1 MGP_WSBEiJ_G0021232.1 mouse_genomes_project 15 72911497 72913566 - MGP_WSBEiJ_P0040263 Slc45a4 protein_coding protein_coding MGP_WSBEiJ_T0040264.1 MGP_WSBEiJ_G0021232.1 mouse_genomes_project 15 72930087 72971824 - MGP_WSBEiJ_P0040264 Slc45a4 protein_coding protein_coding MGP_WSBEiJ_T0040265.1 MGP_WSBEiJ_G0021232.1 mouse_genomes_project 15 72930442 72970491 - Slc45a4 protein_coding processed_transcript MGP_WSBEiJ_T0041333.1 MGP_WSBEiJ_G0021543.1 mouse_genomes_project 15 90293826 90318743 + MGP_WSBEiJ_P0041333 Mapk8ip2 protein_coding protein_coding MGP_WSBEiJ_T0041334.1 MGP_WSBEiJ_G0021543.1 mouse_genomes_project 15 90308225 90309841 + MGP_WSBEiJ_P0041334 Mapk8ip2 protein_coding protein_coding MGP_WSBEiJ_T0000915.1 MGP_WSBEiJ_G0000853.1 mouse_genomes_project 15 93482619 93485509 + TEC TEC MGP_WSBEiJ_T0006686.1 MGP_WSBEiJ_G0005518.1 mouse_genomes_project 15 82066698 82068527 - Gm17597 lincRNA lincRNA MGP_WSBEiJ_T0041548.1 MGP_WSBEiJ_G0021608.1 mouse_genomes_project 15 99940156 99961084 + MGP_WSBEiJ_P0041548 4930415O20Rik protein_coding protein_coding MGP_WSBEiJ_T0041318.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90251865 90269040 - Chkb protein_coding retained_intron MGP_WSBEiJ_T0041323.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90265693 90269204 - Chkb protein_coding retained_intron MGP_WSBEiJ_T0041324.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90265693 90266505 - Chkb protein_coding processed_transcript MGP_WSBEiJ_T0041325.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90265700 90268783 - Chkb protein_coding retained_intron MGP_WSBEiJ_T0041326.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90265700 90269243 - MGP_WSBEiJ_P0041326 Chkb protein_coding protein_coding MGP_WSBEiJ_T0041327.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90265774 90267837 - MGP_WSBEiJ_P0041327 Chkb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041328.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90265801 90266503 - Chkb protein_coding retained_intron MGP_WSBEiJ_T0041329.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90266448 90269252 - Chkb protein_coding retained_intron MGP_WSBEiJ_T0041330.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90266723 90268774 - Chkb protein_coding retained_intron MGP_WSBEiJ_T0041331.1 MGP_WSBEiJ_G0021540.1 mouse_genomes_project 15 90266978 90268437 - MGP_WSBEiJ_P0041331 Chkb protein_coding protein_coding MGP_WSBEiJ_T0039606.1 MGP_WSBEiJ_G0021013.1 mouse_genomes_project 15 3451213 3557776 + MGP_WSBEiJ_P0039606 Fyb protein_coding protein_coding MGP_WSBEiJ_T0039607.1 MGP_WSBEiJ_G0021013.1 mouse_genomes_project 15 3464517 3508491 + Fyb protein_coding retained_intron MGP_WSBEiJ_T0039608.1 MGP_WSBEiJ_G0021013.1 mouse_genomes_project 15 3469627 3524336 + MGP_WSBEiJ_P0039608 Fyb protein_coding protein_coding MGP_WSBEiJ_T0039609.1 MGP_WSBEiJ_G0021013.1 mouse_genomes_project 15 3507476 3521944 + Fyb protein_coding retained_intron MGP_WSBEiJ_T0039610.1 MGP_WSBEiJ_G0021013.1 mouse_genomes_project 15 3533194 3553161 + MGP_WSBEiJ_P0039610 Fyb protein_coding protein_coding MGP_WSBEiJ_T0039611.1 MGP_WSBEiJ_G0021013.1 mouse_genomes_project 15 3536827 3542628 + Fyb protein_coding retained_intron MGP_WSBEiJ_T0039612.1 MGP_WSBEiJ_G0021013.1 mouse_genomes_project 15 3552689 3557855 + Fyb protein_coding retained_intron MGP_WSBEiJ_T0041764.1 MGP_WSBEiJ_G0021678.1 mouse_genomes_project 15 102858249 102866525 + MGP_WSBEiJ_P0041764 Grasp protein_coding protein_coding MGP_WSBEiJ_T0097931.1 MGP_WSBEiJ_G0036594.1 mouse_genomes_project 15 104231175 104231274 + Gm24128 snRNA snRNA MGP_WSBEiJ_T0009886.1 MGP_WSBEiJ_G0008043.1 mouse_genomes_project 15 36724733 36724808 - Mir6951 miRNA miRNA MGP_WSBEiJ_T0040674.1 MGP_WSBEiJ_G0021350.1 mouse_genomes_project 15 78178915 78198072 + MGP_WSBEiJ_P0040674 Ncf4 protein_coding protein_coding MGP_WSBEiJ_T0040675.1 MGP_WSBEiJ_G0021350.1 mouse_genomes_project 15 78178958 78196586 + MGP_WSBEiJ_P0040675 Ncf4 protein_coding protein_coding MGP_WSBEiJ_T0040676.1 MGP_WSBEiJ_G0021350.1 mouse_genomes_project 15 78187146 78190145 + Ncf4 protein_coding retained_intron MGP_WSBEiJ_T0040677.1 MGP_WSBEiJ_G0021350.1 mouse_genomes_project 15 78187360 78196261 + Ncf4 protein_coding processed_transcript MGP_WSBEiJ_T0040678.1 MGP_WSBEiJ_G0021350.1 mouse_genomes_project 15 78189566 78196294 + Ncf4 protein_coding retained_intron MGP_WSBEiJ_T0040679.1 MGP_WSBEiJ_G0021350.1 mouse_genomes_project 15 78196369 78198067 + Ncf4 protein_coding retained_intron MGP_WSBEiJ_T0040945.1 MGP_WSBEiJ_G0021423.1 mouse_genomes_project 15 81641854 81643228 - MGP_WSBEiJ_P0040945 Dnajb7 protein_coding protein_coding MGP_WSBEiJ_T0006642.1 MGP_WSBEiJ_G0005490.1 mouse_genomes_project 15 9120606 9125790 + 1700047G03Rik lincRNA lincRNA MGP_WSBEiJ_T0006643.1 MGP_WSBEiJ_G0005490.1 mouse_genomes_project 15 9120667 9126399 + 1700047G03Rik lincRNA lincRNA MGP_WSBEiJ_T0006644.1 MGP_WSBEiJ_G0005490.1 mouse_genomes_project 15 9120754 9125821 + 1700047G03Rik lincRNA lincRNA MGP_WSBEiJ_T0006645.1 MGP_WSBEiJ_G0005490.1 mouse_genomes_project 15 9123387 9126384 + 1700047G03Rik lincRNA lincRNA MGP_WSBEiJ_T0040946.1 MGP_WSBEiJ_G0021424.1 mouse_genomes_project 15 81703127 81714162 + MGP_WSBEiJ_P0040946 Rbx1 protein_coding protein_coding MGP_WSBEiJ_T0040657.1 MGP_WSBEiJ_G0021344.1 mouse_genomes_project 15 77833414 77834068 - Txn2 protein_coding processed_transcript MGP_WSBEiJ_T0040658.1 MGP_WSBEiJ_G0021344.1 mouse_genomes_project 15 77833414 77847254 - MGP_WSBEiJ_P0040658 Txn2 protein_coding protein_coding MGP_WSBEiJ_T0040659.1 MGP_WSBEiJ_G0021344.1 mouse_genomes_project 15 77833414 77848414 - MGP_WSBEiJ_P0040659 Txn2 protein_coding protein_coding MGP_WSBEiJ_T0040660.1 MGP_WSBEiJ_G0021344.1 mouse_genomes_project 15 77833571 77847137 - MGP_WSBEiJ_P0040660 Txn2 protein_coding protein_coding MGP_WSBEiJ_T0040661.1 MGP_WSBEiJ_G0021344.1 mouse_genomes_project 15 77833577 77848376 - MGP_WSBEiJ_P0040661 Txn2 protein_coding protein_coding MGP_WSBEiJ_T0040662.1 MGP_WSBEiJ_G0021344.1 mouse_genomes_project 15 77837882 77847144 - MGP_WSBEiJ_P0040662 Txn2 protein_coding protein_coding MGP_WSBEiJ_T0040663.1 MGP_WSBEiJ_G0021344.1 mouse_genomes_project 15 77841586 77848382 - MGP_WSBEiJ_P0040663 Txn2 protein_coding protein_coding MGP_WSBEiJ_T0040664.1 MGP_WSBEiJ_G0021344.1 mouse_genomes_project 15 77845494 77848405 - MGP_WSBEiJ_P0040664 Txn2 protein_coding protein_coding MGP_WSBEiJ_T0040703.1 MGP_WSBEiJ_G0021359.1 mouse_genomes_project 15 78548409 78564656 - MGP_WSBEiJ_P0040703 Rac2 protein_coding protein_coding MGP_WSBEiJ_T0039788.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23423598 23623673 + MGP_WSBEiJ_P0039788 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039789.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23423616 23587032 + MGP_WSBEiJ_P0039789 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039790.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23423622 23509138 + Myo10 protein_coding retained_intron MGP_WSBEiJ_T0039791.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23479141 23530992 + Myo10 protein_coding processed_transcript MGP_WSBEiJ_T0039792.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23521046 23531043 + Myo10 protein_coding retained_intron MGP_WSBEiJ_T0039793.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23549638 23588471 + MGP_WSBEiJ_P0039793 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039794.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23560494 23587042 + MGP_WSBEiJ_P0039794 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039795.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23566276 23583613 + MGP_WSBEiJ_P0039795 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039796.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23566296 23587678 + MGP_WSBEiJ_P0039796 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039797.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23576071 23583862 + MGP_WSBEiJ_P0039797 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039798.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23581487 23588334 + MGP_WSBEiJ_P0039798 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039799.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23581806 23623679 + MGP_WSBEiJ_P0039799 Myo10 protein_coding protein_coding MGP_WSBEiJ_T0039800.1 MGP_WSBEiJ_G0021065.1 mouse_genomes_project 15 23587457 23588645 + Myo10 protein_coding retained_intron MGP_WSBEiJ_T0039582.1 MGP_WSBEiJ_G0021009.1 mouse_genomes_project 15 2030100 2064279 + MGP_WSBEiJ_P0039582 Ttc33 protein_coding protein_coding MGP_WSBEiJ_T0039583.1 MGP_WSBEiJ_G0021009.1 mouse_genomes_project 15 2030844 2063980 + MGP_WSBEiJ_P0039583 Ttc33 protein_coding protein_coding MGP_WSBEiJ_T0039584.1 MGP_WSBEiJ_G0021009.1 mouse_genomes_project 15 2032036 2058125 + MGP_WSBEiJ_P0039584 Ttc33 protein_coding protein_coding MGP_WSBEiJ_T0040137.1 MGP_WSBEiJ_G0021200.1 mouse_genomes_project 15 58958926 58960676 - MGP_WSBEiJ_P0040137 4933412E24Rik protein_coding protein_coding MGP_WSBEiJ_T0041884.1 MGP_WSBEiJ_G0021728.1 mouse_genomes_project 15 104304701 104305578 - MGP_WSBEiJ_P0041884 Npff protein_coding protein_coding MGP_WSBEiJ_T0041886.1 MGP_WSBEiJ_G0021728.1 mouse_genomes_project 15 104304708 104305805 - Npff protein_coding retained_intron MGP_WSBEiJ_T0040840.1 MGP_WSBEiJ_G0021398.1 mouse_genomes_project 15 79889062 79942184 - MGP_WSBEiJ_P0040840 Npcd protein_coding protein_coding MGP_WSBEiJ_T0040841.1 MGP_WSBEiJ_G0021398.1 mouse_genomes_project 15 79889062 79942184 - MGP_WSBEiJ_P0040841 Npcd protein_coding protein_coding MGP_WSBEiJ_T0041269.1 MGP_WSBEiJ_G0021527.1 mouse_genomes_project 15 89969989 89995330 - MGP_WSBEiJ_P0041269 Plxnb2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041270.1 MGP_WSBEiJ_G0021527.1 mouse_genomes_project 15 89969993 89971024 - Plxnb2 protein_coding processed_transcript MGP_WSBEiJ_T0041271.1 MGP_WSBEiJ_G0021527.1 mouse_genomes_project 15 89970425 89971689 - Plxnb2 protein_coding processed_transcript MGP_WSBEiJ_T0041272.1 MGP_WSBEiJ_G0021527.1 mouse_genomes_project 15 89975516 89976053 - Plxnb2 protein_coding processed_transcript MGP_WSBEiJ_T0041273.1 MGP_WSBEiJ_G0021527.1 mouse_genomes_project 15 89979394 89980301 - Plxnb2 protein_coding processed_transcript MGP_WSBEiJ_T0097925.1 MGP_WSBEiJ_G0036588.1 mouse_genomes_project 15 96761605 96761709 - Gm24668 snRNA snRNA MGP_WSBEiJ_T0039588.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3161610 3304679 + Dab2 protein_coding processed_transcript MGP_WSBEiJ_T0039589.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3161610 3309868 + MGP_WSBEiJ_P0039589 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039590.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3161635 3286378 + MGP_WSBEiJ_P0039590 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039591.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3161654 3297122 + MGP_WSBEiJ_P0039591 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039592.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3161690 3201184 + Dab2 protein_coding processed_transcript MGP_WSBEiJ_T0039593.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3252820 3309861 + MGP_WSBEiJ_P0039593 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039594.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3252970 3309861 + MGP_WSBEiJ_P0039594 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039595.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3252998 3308784 + MGP_WSBEiJ_P0039595 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039596.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3252999 3308804 + MGP_WSBEiJ_P0039596 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039597.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3253001 3297122 + MGP_WSBEiJ_P0039597 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039598.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3255301 3287683 + MGP_WSBEiJ_P0039598 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039599.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3257678 3289202 + MGP_WSBEiJ_P0039599 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039600.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3291596 3308063 + MGP_WSBEiJ_P0039600 Dab2 protein_coding protein_coding MGP_WSBEiJ_T0039601.1 MGP_WSBEiJ_G0021011.1 mouse_genomes_project 15 3292518 3294381 + Dab2 protein_coding retained_intron MGP_WSBEiJ_T0100347.1 MGP_WSBEiJ_G0038830.1 mouse_genomes_project 15 75220705 75227386 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100348.1 MGP_WSBEiJ_G0038830.1 mouse_genomes_project 15 75221051 75223056 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100349.1 MGP_WSBEiJ_G0038830.1 mouse_genomes_project 15 75221060 75233597 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100350.1 MGP_WSBEiJ_G0038830.1 mouse_genomes_project 15 75222062 75226916 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0100351.1 MGP_WSBEiJ_G0038830.1 mouse_genomes_project 15 75223075 75226681 + unitary_pseudogene retained_intron MGP_WSBEiJ_T0100352.1 MGP_WSBEiJ_G0038830.1 mouse_genomes_project 15 75223239 75226434 + unitary_pseudogene processed_transcript MGP_WSBEiJ_T0097893.1 MGP_WSBEiJ_G0036556.1 mouse_genomes_project 15 35790463 35790583 - Gm24833 snRNA snRNA MGP_WSBEiJ_T0039548.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 159422 432248 - MGP_WSBEiJ_P0039548 Ghr protein_coding protein_coding MGP_WSBEiJ_T0039549.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 160671 430871 - MGP_WSBEiJ_P0039549 Ghr protein_coding protein_coding MGP_WSBEiJ_T0039550.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 171676 432206 - MGP_WSBEiJ_P0039550 Ghr protein_coding protein_coding MGP_WSBEiJ_T0039551.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 171690 322018 - MGP_WSBEiJ_P0039551 Ghr protein_coding protein_coding MGP_WSBEiJ_T0039552.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 177586 431625 - MGP_WSBEiJ_P0039552 Ghr protein_coding protein_coding MGP_WSBEiJ_T0039553.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 184880 432206 - Ghr protein_coding processed_transcript MGP_WSBEiJ_T0039554.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 190194 432230 - Ghr protein_coding retained_intron MGP_WSBEiJ_T0039555.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 191476 432229 - Ghr protein_coding processed_transcript MGP_WSBEiJ_T0039556.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 229412 432510 - Ghr protein_coding retained_intron MGP_WSBEiJ_T0039557.1 MGP_WSBEiJ_G0020997.1 mouse_genomes_project 15 393555 432205 - Ghr protein_coding processed_transcript MGP_WSBEiJ_T0100578.1 MGP_WSBEiJ_G0039036.1 mouse_genomes_project 15 74352519 74352670 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0041942.1 MGP_WSBEiJ_G0021748.1 mouse_genomes_project 15 105135632 105164662 - MGP_WSBEiJ_P0041942 Zfp385a protein_coding protein_coding MGP_WSBEiJ_T0012764.1 MGP_WSBEiJ_G0010894.1 mouse_genomes_project 15 10665035 10666779 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006641.1 MGP_WSBEiJ_G0005489.1 mouse_genomes_project 15 7811107 7818165 + 4930556M19Rik lincRNA lincRNA MGP_WSBEiJ_T0006685.1 MGP_WSBEiJ_G0005517.1 mouse_genomes_project 15 79835297 79852018 + Gm16576 lincRNA lincRNA MGP_WSBEiJ_T0041049.1 MGP_WSBEiJ_G0021454.1 mouse_genomes_project 15 82702999 82712781 - MGP_WSBEiJ_P0041049 Cyp2d22 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041799.1 MGP_WSBEiJ_G0021707.1 mouse_genomes_project 15 103841341 103854984 + MGP_WSBEiJ_P0041799 Tns2 protein_coding protein_coding MGP_WSBEiJ_T0041800.1 MGP_WSBEiJ_G0021707.1 mouse_genomes_project 15 103841341 103854974 + MGP_WSBEiJ_P0041800 Tns2 protein_coding protein_coding MGP_WSBEiJ_T0041777.1 MGP_WSBEiJ_G0021686.1 mouse_genomes_project 15 103166206 103175017 - MGP_WSBEiJ_P0041777 Krt83 protein_coding protein_coding MGP_WSBEiJ_T0039747.1 MGP_WSBEiJ_G0021051.1 mouse_genomes_project 15 9495437 9495899 - MGP_WSBEiJ_P0039747 1810049J17Rik protein_coding protein_coding MGP_WSBEiJ_T0039862.1 MGP_WSBEiJ_G0021093.1 mouse_genomes_project 15 32510441 32514806 - Rpl30 protein_coding processed_transcript MGP_WSBEiJ_T0039863.1 MGP_WSBEiJ_G0021093.1 mouse_genomes_project 15 32510441 32515058 - Rpl30 protein_coding retained_intron MGP_WSBEiJ_T0039864.1 MGP_WSBEiJ_G0021093.1 mouse_genomes_project 15 32510441 32515538 - MGP_WSBEiJ_P0039864 Rpl30 protein_coding protein_coding MGP_WSBEiJ_T0039865.1 MGP_WSBEiJ_G0021093.1 mouse_genomes_project 15 32510446 32515120 - MGP_WSBEiJ_P0039865 Rpl30 protein_coding protein_coding MGP_WSBEiJ_T0039866.1 MGP_WSBEiJ_G0021093.1 mouse_genomes_project 15 32510491 32515559 - MGP_WSBEiJ_P0039866 Rpl30 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039867.1 MGP_WSBEiJ_G0021093.1 mouse_genomes_project 15 32510511 32511602 - Rpl30 protein_coding retained_intron MGP_WSBEiJ_T0039868.1 MGP_WSBEiJ_G0021093.1 mouse_genomes_project 15 32514418 32515157 - Rpl30 protein_coding processed_transcript MGP_WSBEiJ_T0041564.1 MGP_WSBEiJ_G0021615.1 mouse_genomes_project 15 100122469 100150127 - MGP_WSBEiJ_P0041564 Arf3 protein_coding protein_coding MGP_WSBEiJ_T0041565.1 MGP_WSBEiJ_G0021615.1 mouse_genomes_project 15 100125878 100150130 - Arf3 protein_coding processed_transcript MGP_WSBEiJ_T0041566.1 MGP_WSBEiJ_G0021615.1 mouse_genomes_project 15 100127413 100149908 - MGP_WSBEiJ_P0041566 Arf3 protein_coding protein_coding MGP_WSBEiJ_T0040778.1 MGP_WSBEiJ_G0021381.1 mouse_genomes_project 15 79308603 79343425 - MGP_WSBEiJ_P0040778 Baiap2l2 protein_coding protein_coding MGP_WSBEiJ_T0040779.1 MGP_WSBEiJ_G0021381.1 mouse_genomes_project 15 79308604 79343330 - MGP_WSBEiJ_P0040779 Baiap2l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040780.1 MGP_WSBEiJ_G0021381.1 mouse_genomes_project 15 79308739 79309760 - Baiap2l2 protein_coding processed_transcript MGP_WSBEiJ_T0040781.1 MGP_WSBEiJ_G0021381.1 mouse_genomes_project 15 79310124 79311706 - Baiap2l2 protein_coding processed_transcript MGP_WSBEiJ_T0040782.1 MGP_WSBEiJ_G0021381.1 mouse_genomes_project 15 79320573 79343381 - MGP_WSBEiJ_P0040782 Baiap2l2 protein_coding protein_coding MGP_WSBEiJ_T0040190.1 MGP_WSBEiJ_G0021212.1 mouse_genomes_project 15 65034943 65079948 - MGP_WSBEiJ_P0040190 Hhla1 protein_coding protein_coding MGP_WSBEiJ_T0040457.1 MGP_WSBEiJ_G0021291.1 mouse_genomes_project 15 75911660 75914123 + MGP_WSBEiJ_P0040457 Smpd5 protein_coding protein_coding MGP_WSBEiJ_T0040458.1 MGP_WSBEiJ_G0021291.1 mouse_genomes_project 15 75912194 75913479 + MGP_WSBEiJ_P0040458 Smpd5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040459.1 MGP_WSBEiJ_G0021291.1 mouse_genomes_project 15 75912477 75914120 + Smpd5 protein_coding retained_intron MGP_WSBEiJ_T0040460.1 MGP_WSBEiJ_G0021291.1 mouse_genomes_project 15 75912535 75913100 + Smpd5 protein_coding retained_intron MGP_WSBEiJ_T0041670.1 MGP_WSBEiJ_G0021654.1 mouse_genomes_project 15 101529418 101723720 + MGP_WSBEiJ_P0041670 Dip2b protein_coding protein_coding MGP_WSBEiJ_T0041671.1 MGP_WSBEiJ_G0021654.1 mouse_genomes_project 15 101655656 101719887 + MGP_WSBEiJ_P0041671 Dip2b protein_coding protein_coding MGP_WSBEiJ_T0041672.1 MGP_WSBEiJ_G0021654.1 mouse_genomes_project 15 101655656 101723720 + MGP_WSBEiJ_P0041672 Dip2b protein_coding protein_coding MGP_WSBEiJ_T0041673.1 MGP_WSBEiJ_G0021654.1 mouse_genomes_project 15 101707388 101709882 + Dip2b protein_coding processed_transcript MGP_WSBEiJ_T0041534.1 MGP_WSBEiJ_G0021603.1 mouse_genomes_project 15 99804028 99805086 + MGP_WSBEiJ_P0041534 Olfr281 protein_coding protein_coding MGP_WSBEiJ_T0039964.1 MGP_WSBEiJ_G0021127.1 mouse_genomes_project 15 37231837 37264424 + MGP_WSBEiJ_P0039964 Dcaf13 protein_coding protein_coding MGP_WSBEiJ_T0040640.1 MGP_WSBEiJ_G0021335.1 mouse_genomes_project 15 77329971 77342984 - MGP_WSBEiJ_P0040640 Apol10b protein_coding protein_coding MGP_WSBEiJ_T0040699.1 MGP_WSBEiJ_G0021357.1 mouse_genomes_project 15 78512700 78519004 - MGP_WSBEiJ_P0040699 C1qtnf6 protein_coding protein_coding MGP_WSBEiJ_T0040700.1 MGP_WSBEiJ_G0021357.1 mouse_genomes_project 15 78512701 78519004 - C1qtnf6 protein_coding processed_transcript MGP_WSBEiJ_T0040701.1 MGP_WSBEiJ_G0021357.1 mouse_genomes_project 15 78514477 78516708 - C1qtnf6 protein_coding processed_transcript MGP_WSBEiJ_T0040643.1 MGP_WSBEiJ_G0021338.1 mouse_genomes_project 15 77594456 77622199 + MGP_WSBEiJ_P0040643 protein_coding protein_coding MGP_WSBEiJ_T0016869.1 MGP_WSBEiJ_G0014717.1 mouse_genomes_project 15 63199968 63202549 + Gm20717 processed_transcript processed_transcript MGP_WSBEiJ_T0006689.1 MGP_WSBEiJ_G0005520.1 mouse_genomes_project 15 83429240 83435376 + AW121686 lincRNA lincRNA MGP_WSBEiJ_T0041923.1 MGP_WSBEiJ_G0021742.1 mouse_genomes_project 15 104964473 104969177 - MGP_WSBEiJ_P0041923 Smug1 protein_coding protein_coding MGP_WSBEiJ_T0041570.1 MGP_WSBEiJ_G0021619.1 mouse_genomes_project 15 100206830 100225427 - MGP_WSBEiJ_P0041570 Prkag1 protein_coding protein_coding MGP_WSBEiJ_T0009927.1 MGP_WSBEiJ_G0008084.1 mouse_genomes_project 15 90000016 90000089 - Mir6958 miRNA miRNA MGP_WSBEiJ_T0041346.1 MGP_WSBEiJ_G0021546.1 mouse_genomes_project 15 90430621 90436868 + MGP_WSBEiJ_P0041346 Acr protein_coding protein_coding MGP_WSBEiJ_T0041433.1 MGP_WSBEiJ_G0021573.1 mouse_genomes_project 15 97000492 97005988 - MGP_WSBEiJ_P0041433 Gm17546 protein_coding protein_coding MGP_WSBEiJ_T0003532.1 MGP_WSBEiJ_G0003206.1 mouse_genomes_project 15 65858303 65863571 - Gm17140 antisense antisense MGP_WSBEiJ_T0040738.1 MGP_WSBEiJ_G0021371.1 mouse_genomes_project 15 79062176 79064463 + MGP_WSBEiJ_P0040738 H1f0 protein_coding protein_coding MGP_WSBEiJ_T0100580.1 MGP_WSBEiJ_G0039038.1 mouse_genomes_project 15 74725861 74729019 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012775.1 MGP_WSBEiJ_G0010905.1 mouse_genomes_project 15 35605809 35607257 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040617.1 MGP_WSBEiJ_G0021327.1 mouse_genomes_project 15 76591014 76607252 - MGP_WSBEiJ_P0040617 Zfp647 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039748.1 MGP_WSBEiJ_G0021052.1 mouse_genomes_project 15 9495495 9526800 + MGP_WSBEiJ_P0039748 Golph3 protein_coding protein_coding MGP_WSBEiJ_T0039672.1 MGP_WSBEiJ_G0021029.1 mouse_genomes_project 15 6395325 6443314 + MGP_WSBEiJ_P0039672 Ugt3a2 protein_coding protein_coding MGP_WSBEiJ_T0039673.1 MGP_WSBEiJ_G0021029.1 mouse_genomes_project 15 6395364 6434482 + Ugt3a2 protein_coding retained_intron MGP_WSBEiJ_T0039721.1 MGP_WSBEiJ_G0021041.1 mouse_genomes_project 15 8035872 8064001 + MGP_WSBEiJ_P0039721 C1qtnf3 protein_coding protein_coding MGP_WSBEiJ_T0039722.1 MGP_WSBEiJ_G0021041.1 mouse_genomes_project 15 8035897 8063557 + MGP_WSBEiJ_P0039722 C1qtnf3 protein_coding protein_coding MGP_WSBEiJ_T0041711.1 MGP_WSBEiJ_G0021668.1 mouse_genomes_project 15 102198538 102213996 - MGP_WSBEiJ_P0041711 Smagp protein_coding protein_coding MGP_WSBEiJ_T0041712.1 MGP_WSBEiJ_G0021668.1 mouse_genomes_project 15 102198538 102213986 - MGP_WSBEiJ_P0041712 Smagp protein_coding protein_coding MGP_WSBEiJ_T0041431.1 MGP_WSBEiJ_G0021572.1 mouse_genomes_project 15 96952965 97159312 + MGP_WSBEiJ_P0041431 Ano6 protein_coding protein_coding MGP_WSBEiJ_T0041432.1 MGP_WSBEiJ_G0021572.1 mouse_genomes_project 15 96953106 97159325 + MGP_WSBEiJ_P0041432 Ano6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0006717.1 MGP_WSBEiJ_G0005539.1 mouse_genomes_project 15 104904295 104910247 - Gm28876 lincRNA lincRNA MGP_WSBEiJ_T0099143.1 MGP_WSBEiJ_G0037806.1 mouse_genomes_project 15 27936548 27936621 - Gm24554 snoRNA snoRNA MGP_WSBEiJ_T0040059.1 MGP_WSBEiJ_G0021168.1 mouse_genomes_project 15 54045385 54261129 + MGP_WSBEiJ_P0040059 Col14a1 protein_coding protein_coding MGP_WSBEiJ_T0040060.1 MGP_WSBEiJ_G0021168.1 mouse_genomes_project 15 54045385 54261130 + MGP_WSBEiJ_P0040060 Col14a1 protein_coding protein_coding MGP_WSBEiJ_T0040061.1 MGP_WSBEiJ_G0021168.1 mouse_genomes_project 15 54045386 54261128 + MGP_WSBEiJ_P0040061 Col14a1 protein_coding protein_coding MGP_WSBEiJ_T0040062.1 MGP_WSBEiJ_G0021168.1 mouse_genomes_project 15 54185026 54260016 + MGP_WSBEiJ_P0040062 Col14a1 protein_coding protein_coding MGP_WSBEiJ_T0011193.1 MGP_WSBEiJ_G0009350.1 mouse_genomes_project 15 78351057 78351167 + Gm26329 misc_RNA misc_RNA MGP_WSBEiJ_T0041173.1 MGP_WSBEiJ_G0021500.1 mouse_genomes_project 15 86366088 86408024 + Ppara protein_coding processed_transcript MGP_WSBEiJ_T0041174.1 MGP_WSBEiJ_G0021500.1 mouse_genomes_project 15 86366669 86434320 + MGP_WSBEiJ_P0041174 Ppara protein_coding protein_coding MGP_WSBEiJ_T0041175.1 MGP_WSBEiJ_G0021500.1 mouse_genomes_project 15 86366744 86408119 + Ppara protein_coding processed_transcript MGP_WSBEiJ_T0041176.1 MGP_WSBEiJ_G0021500.1 mouse_genomes_project 15 86366881 86434981 + MGP_WSBEiJ_P0041176 Ppara protein_coding protein_coding MGP_WSBEiJ_T0041177.1 MGP_WSBEiJ_G0021500.1 mouse_genomes_project 15 86367236 86433905 + MGP_WSBEiJ_P0041177 Ppara protein_coding protein_coding MGP_WSBEiJ_T0041178.1 MGP_WSBEiJ_G0021500.1 mouse_genomes_project 15 86402602 86408159 + Ppara protein_coding processed_transcript MGP_WSBEiJ_T0097894.1 MGP_WSBEiJ_G0036557.1 mouse_genomes_project 15 42711380 42711487 + Gm22392 snRNA snRNA MGP_WSBEiJ_T0000907.1 MGP_WSBEiJ_G0000845.1 mouse_genomes_project 15 18824435 18824854 + TEC TEC MGP_WSBEiJ_T0041651.1 MGP_WSBEiJ_G0021645.1 mouse_genomes_project 15 101118760 101152024 + MGP_WSBEiJ_P0041651 Asic1 protein_coding protein_coding MGP_WSBEiJ_T0041144.1 MGP_WSBEiJ_G0021486.1 mouse_genomes_project 15 85245910 85272356 + MGP_WSBEiJ_P0041144 Prr5 protein_coding protein_coding MGP_WSBEiJ_T0041845.1 MGP_WSBEiJ_G0021721.1 mouse_genomes_project 15 104170579 104173952 + MGP_WSBEiJ_P0041845 Sp1 protein_coding protein_coding MGP_WSBEiJ_T0041846.1 MGP_WSBEiJ_G0021721.1 mouse_genomes_project 15 104170764 104203981 + MGP_WSBEiJ_P0041846 Sp1 protein_coding protein_coding MGP_WSBEiJ_T0041847.1 MGP_WSBEiJ_G0021721.1 mouse_genomes_project 15 104170769 104203981 + MGP_WSBEiJ_P0041847 Sp1 protein_coding protein_coding MGP_WSBEiJ_T0041848.1 MGP_WSBEiJ_G0021721.1 mouse_genomes_project 15 104170815 104207706 + MGP_WSBEiJ_P0041848 Sp1 protein_coding protein_coding MGP_WSBEiJ_T0041849.1 MGP_WSBEiJ_G0021721.1 mouse_genomes_project 15 104172472 104174334 + MGP_WSBEiJ_P0041849 Sp1 protein_coding protein_coding MGP_WSBEiJ_T0041850.1 MGP_WSBEiJ_G0021721.1 mouse_genomes_project 15 104172985 104173952 + MGP_WSBEiJ_P0041850 Sp1 protein_coding protein_coding MGP_WSBEiJ_T0041851.1 MGP_WSBEiJ_G0021721.1 mouse_genomes_project 15 104173304 104174102 + MGP_WSBEiJ_P0041851 Sp1 protein_coding protein_coding MGP_WSBEiJ_T0041852.1 MGP_WSBEiJ_G0021721.1 mouse_genomes_project 15 104200078 104200992 + Sp1 protein_coding processed_transcript MGP_WSBEiJ_T0040240.1 MGP_WSBEiJ_G0021226.1 mouse_genomes_project 15 71767291 71801319 - MGP_WSBEiJ_P0040240 Kcnk9 protein_coding protein_coding MGP_WSBEiJ_T0100225.1 MGP_WSBEiJ_G0038775.1 mouse_genomes_project 15 62964951 62966911 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0097927.1 MGP_WSBEiJ_G0036590.1 mouse_genomes_project 15 100800761 100800868 - Gm22951 snRNA snRNA MGP_WSBEiJ_T0041039.1 MGP_WSBEiJ_G0021451.1 mouse_genomes_project 15 82668058 82672375 + Fam109b protein_coding processed_transcript MGP_WSBEiJ_T0041041.1 MGP_WSBEiJ_G0021451.1 mouse_genomes_project 15 82669669 82672389 + Fam109b protein_coding processed_transcript MGP_WSBEiJ_T0041042.1 MGP_WSBEiJ_G0021451.1 mouse_genomes_project 15 82669974 82674834 + MGP_WSBEiJ_P0041042 Fam109b protein_coding protein_coding MGP_WSBEiJ_T0041044.1 MGP_WSBEiJ_G0021451.1 mouse_genomes_project 15 82670295 82674826 + MGP_WSBEiJ_P0041044 Fam109b protein_coding protein_coding MGP_WSBEiJ_T0040749.1 MGP_WSBEiJ_G0021374.1 mouse_genomes_project 15 79114793 79138106 + MGP_WSBEiJ_P0040749 Eif3l protein_coding protein_coding MGP_WSBEiJ_T0041443.1 MGP_WSBEiJ_G0021577.1 mouse_genomes_project 15 97923544 97935810 - MGP_WSBEiJ_P0041443 Slc38a2 protein_coding protein_coding MGP_WSBEiJ_T0016860.1 MGP_WSBEiJ_G0014714.1 mouse_genomes_project 15 55477468 55481992 + Has2os processed_transcript antisense MGP_WSBEiJ_T0016861.1 MGP_WSBEiJ_G0014714.1 mouse_genomes_project 15 55481080 55569033 + Has2os processed_transcript antisense MGP_WSBEiJ_T0016862.1 MGP_WSBEiJ_G0014714.1 mouse_genomes_project 15 55481484 55568749 + Has2os processed_transcript antisense MGP_WSBEiJ_T0016863.1 MGP_WSBEiJ_G0014714.1 mouse_genomes_project 15 55555664 55568712 + Has2os processed_transcript lincRNA MGP_WSBEiJ_T0040077.1 MGP_WSBEiJ_G0021172.1 mouse_genomes_project 15 55451499 55482071 - MGP_WSBEiJ_P0040077 Has2 protein_coding protein_coding MGP_WSBEiJ_T0039901.1 MGP_WSBEiJ_G0021106.1 mouse_genomes_project 15 34301805 34359827 + MGP_WSBEiJ_P0039901 Spag1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0040716.1 MGP_WSBEiJ_G0021367.1 mouse_genomes_project 15 78915774 78939289 + Sh3bp1 protein_coding processed_transcript MGP_WSBEiJ_T0040717.1 MGP_WSBEiJ_G0021367.1 mouse_genomes_project 15 78915874 78931252 + MGP_WSBEiJ_P0040717 Sh3bp1 protein_coding protein_coding MGP_WSBEiJ_T0040718.1 MGP_WSBEiJ_G0021367.1 mouse_genomes_project 15 78915874 78931252 + MGP_WSBEiJ_P0040718 Sh3bp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040719.1 MGP_WSBEiJ_G0021367.1 mouse_genomes_project 15 78915874 78931252 + MGP_WSBEiJ_P0040719 Sh3bp1 protein_coding protein_coding MGP_WSBEiJ_T0040720.1 MGP_WSBEiJ_G0021367.1 mouse_genomes_project 15 78915874 78931248 + MGP_WSBEiJ_P0040720 Sh3bp1 protein_coding protein_coding MGP_WSBEiJ_T0040721.1 MGP_WSBEiJ_G0021367.1 mouse_genomes_project 15 78915874 78931252 + MGP_WSBEiJ_P0040721 Sh3bp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040722.1 MGP_WSBEiJ_G0021367.1 mouse_genomes_project 15 78933135 78939774 + MGP_WSBEiJ_P0040722 Sh3bp1 protein_coding protein_coding MGP_WSBEiJ_T0006662.1 MGP_WSBEiJ_G0005506.1 mouse_genomes_project 15 44682445 44732580 + 1700022A22Rik lincRNA lincRNA MGP_WSBEiJ_T0006663.1 MGP_WSBEiJ_G0005506.1 mouse_genomes_project 15 44682457 44714235 + 1700022A22Rik lincRNA lincRNA MGP_WSBEiJ_T0006664.1 MGP_WSBEiJ_G0005506.1 mouse_genomes_project 15 44682471 44732629 + 1700022A22Rik lincRNA lincRNA MGP_WSBEiJ_T0041684.1 MGP_WSBEiJ_G0021659.1 mouse_genomes_project 15 101819528 101827371 + MGP_WSBEiJ_P0041684 protein_coding protein_coding MGP_WSBEiJ_T0040138.1 MGP_WSBEiJ_G0021201.1 mouse_genomes_project 15 59674556 59679696 + MGP_WSBEiJ_P0040138 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0040277.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73867339 73948151 + MGP_WSBEiJ_P0040277 Adgrb1 protein_coding protein_coding MGP_WSBEiJ_T0040278.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73869572 73948151 + MGP_WSBEiJ_P0040278 Adgrb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040279.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73869965 73948151 + MGP_WSBEiJ_P0040279 Adgrb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040280.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73895790 73898902 + MGP_WSBEiJ_P0040280 Adgrb1 protein_coding protein_coding MGP_WSBEiJ_T0040281.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73916460 73931663 + MGP_WSBEiJ_P0040281 Adgrb1 protein_coding protein_coding MGP_WSBEiJ_T0040282.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73918554 73929751 + MGP_WSBEiJ_P0040282 Adgrb1 protein_coding protein_coding MGP_WSBEiJ_T0040283.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73920305 73948151 + MGP_WSBEiJ_P0040283 Adgrb1 protein_coding protein_coding MGP_WSBEiJ_T0040284.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73920315 73948130 + MGP_WSBEiJ_P0040284 Adgrb1 protein_coding protein_coding MGP_WSBEiJ_T0040285.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73920363 73930405 + MGP_WSBEiJ_P0040285 Adgrb1 protein_coding protein_coding MGP_WSBEiJ_T0040286.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73928493 73948152 + Adgrb1 protein_coding processed_transcript MGP_WSBEiJ_T0040287.1 MGP_WSBEiJ_G0021237.1 mouse_genomes_project 15 73931686 73948152 + MGP_WSBEiJ_P0040287 Adgrb1 protein_coding protein_coding MGP_WSBEiJ_T0041035.1 MGP_WSBEiJ_G0021448.1 mouse_genomes_project 15 82596289 82615804 + MGP_WSBEiJ_P0041035 Sept3 protein_coding protein_coding MGP_WSBEiJ_T0041036.1 MGP_WSBEiJ_G0021448.1 mouse_genomes_project 15 82596601 82613420 + MGP_WSBEiJ_P0041036 Sept3 protein_coding protein_coding MGP_WSBEiJ_T0041055.1 MGP_WSBEiJ_G0021460.1 mouse_genomes_project 15 83199007 83235254 - MGP_WSBEiJ_P0041055 Cyp2d26 protein_coding protein_coding MGP_WSBEiJ_T0000909.1 MGP_WSBEiJ_G0000847.1 mouse_genomes_project 15 60975253 60979315 - TEC TEC MGP_WSBEiJ_T0011198.1 MGP_WSBEiJ_G0009355.1 mouse_genomes_project 15 104263028 104263210 + Gm27406 misc_RNA misc_RNA MGP_WSBEiJ_T0041249.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89907279 89931998 - MGP_WSBEiJ_P0041249 Tubgcp6 protein_coding protein_coding MGP_WSBEiJ_T0041250.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89908020 89910026 - Tubgcp6 protein_coding retained_intron MGP_WSBEiJ_T0041251.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89909332 89931797 - MGP_WSBEiJ_P0041251 Tubgcp6 protein_coding protein_coding MGP_WSBEiJ_T0041252.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89909332 89911548 - MGP_WSBEiJ_P0041252 Tubgcp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041253.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89909356 89910471 - Tubgcp6 protein_coding retained_intron MGP_WSBEiJ_T0041254.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89909620 89910207 - Tubgcp6 protein_coding retained_intron MGP_WSBEiJ_T0041255.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89909644 89910959 - MGP_WSBEiJ_P0041255 Tubgcp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041256.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89909939 89911125 - Tubgcp6 protein_coding retained_intron MGP_WSBEiJ_T0041257.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89910403 89911317 - MGP_WSBEiJ_P0041257 Tubgcp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041258.1 MGP_WSBEiJ_G0021523.1 mouse_genomes_project 15 89913160 89916375 - MGP_WSBEiJ_P0041258 Tubgcp6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040299.1 MGP_WSBEiJ_G0021243.1 mouse_genomes_project 15 74087955 74091668 - MGP_WSBEiJ_P0040299 Slurp1 protein_coding protein_coding MGP_WSBEiJ_T0040300.1 MGP_WSBEiJ_G0021243.1 mouse_genomes_project 15 74090301 74091648 - MGP_WSBEiJ_P0040300 Slurp1 protein_coding protein_coding MGP_WSBEiJ_T0012777.1 MGP_WSBEiJ_G0010907.1 mouse_genomes_project 15 36061380 36062809 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041944.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105230022 105250086 - MGP_WSBEiJ_P0041944 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041945.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105230073 105248222 - MGP_WSBEiJ_P0041945 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041946.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105230073 105248116 - MGP_WSBEiJ_P0041946 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041947.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105230076 105249178 - MGP_WSBEiJ_P0041947 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041948.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105230098 105249965 - MGP_WSBEiJ_P0041948 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041949.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105230110 105249960 - MGP_WSBEiJ_P0041949 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041950.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105230129 105249995 - MGP_WSBEiJ_P0041950 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041951.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105237198 105250025 - MGP_WSBEiJ_P0041951 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041952.1 MGP_WSBEiJ_G0021750.1 mouse_genomes_project 15 105239599 105249860 - MGP_WSBEiJ_P0041952 Gtsf1 protein_coding protein_coding MGP_WSBEiJ_T0041921.1 MGP_WSBEiJ_G0021741.1 mouse_genomes_project 15 104820460 104841372 + MGP_WSBEiJ_P0041921 Hoxc4 protein_coding protein_coding MGP_WSBEiJ_T0041922.1 MGP_WSBEiJ_G0021741.1 mouse_genomes_project 15 104839361 104841819 + MGP_WSBEiJ_P0041922 Hoxc4 protein_coding protein_coding MGP_WSBEiJ_T0097899.1 MGP_WSBEiJ_G0036562.1 mouse_genomes_project 15 48010770 48010876 + Gm23848 snRNA snRNA MGP_WSBEiJ_T0040114.1 MGP_WSBEiJ_G0021186.1 mouse_genomes_project 15 57277070 57319482 + MGP_WSBEiJ_P0040114 Fam91a1 protein_coding protein_coding MGP_WSBEiJ_T0041904.1 MGP_WSBEiJ_G0021732.1 mouse_genomes_project 15 104495574 104511913 - MGP_WSBEiJ_P0041904 Calcoco1 protein_coding protein_coding MGP_WSBEiJ_T0041905.1 MGP_WSBEiJ_G0021732.1 mouse_genomes_project 15 104495767 104498705 - MGP_WSBEiJ_P0041905 Calcoco1 protein_coding protein_coding MGP_WSBEiJ_T0041906.1 MGP_WSBEiJ_G0021732.1 mouse_genomes_project 15 104496384 104511866 - MGP_WSBEiJ_P0041906 Calcoco1 protein_coding protein_coding MGP_WSBEiJ_T0041907.1 MGP_WSBEiJ_G0021732.1 mouse_genomes_project 15 104499898 104505501 - Calcoco1 protein_coding retained_intron MGP_WSBEiJ_T0003551.1 MGP_WSBEiJ_G0003220.1 mouse_genomes_project 15 90331336 90341655 + C230037L18Rik antisense antisense MGP_WSBEiJ_T0003552.1 MGP_WSBEiJ_G0003220.1 mouse_genomes_project 15 90331352 90334777 + C230037L18Rik antisense antisense MGP_WSBEiJ_T0003553.1 MGP_WSBEiJ_G0003220.1 mouse_genomes_project 15 90334602 90341590 + C230037L18Rik antisense antisense MGP_WSBEiJ_T0041240.1 MGP_WSBEiJ_G0021521.1 mouse_genomes_project 15 89882697 89892872 + MGP_WSBEiJ_P0041240 Trabd protein_coding protein_coding MGP_WSBEiJ_T0041241.1 MGP_WSBEiJ_G0021521.1 mouse_genomes_project 15 89883586 89894640 + MGP_WSBEiJ_P0041241 Trabd protein_coding protein_coding MGP_WSBEiJ_T0041242.1 MGP_WSBEiJ_G0021521.1 mouse_genomes_project 15 89883645 89894634 + MGP_WSBEiJ_P0041242 Trabd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041243.1 MGP_WSBEiJ_G0021521.1 mouse_genomes_project 15 89883667 89893693 + MGP_WSBEiJ_P0041243 Trabd protein_coding protein_coding MGP_WSBEiJ_T0041244.1 MGP_WSBEiJ_G0021521.1 mouse_genomes_project 15 89883697 89893696 + MGP_WSBEiJ_P0041244 Trabd protein_coding protein_coding MGP_WSBEiJ_T0041245.1 MGP_WSBEiJ_G0021521.1 mouse_genomes_project 15 89890091 89894634 + Trabd protein_coding retained_intron MGP_WSBEiJ_T0041246.1 MGP_WSBEiJ_G0021521.1 mouse_genomes_project 15 89892271 89893187 + Trabd protein_coding retained_intron MGP_WSBEiJ_T0041788.1 MGP_WSBEiJ_G0021696.1 mouse_genomes_project 15 103514512 103523548 - MGP_WSBEiJ_P0041788 Krt73 protein_coding protein_coding MGP_WSBEiJ_T0039844.1 MGP_WSBEiJ_G0021086.1 mouse_genomes_project 15 30831189 31086230 + MGP_WSBEiJ_P0039844 Sdc2 protein_coding protein_coding MGP_WSBEiJ_T0039845.1 MGP_WSBEiJ_G0021086.1 mouse_genomes_project 15 30831240 30831772 + Sdc2 protein_coding processed_transcript MGP_WSBEiJ_T0009908.1 MGP_WSBEiJ_G0008065.1 mouse_genomes_project 15 80213762 80213870 - Snord43 miRNA miRNA MGP_WSBEiJ_T0012783.1 MGP_WSBEiJ_G0010913.1 mouse_genomes_project 15 52749179 52750654 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041956.1 MGP_WSBEiJ_G0021754.1 mouse_genomes_project 15 105352451 105360104 - MGP_WSBEiJ_P0041956 Ppp1r1a protein_coding protein_coding MGP_WSBEiJ_T0009893.1 MGP_WSBEiJ_G0008050.1 mouse_genomes_project 15 67492377 67492459 - Mir30d miRNA miRNA MGP_WSBEiJ_T0041695.1 MGP_WSBEiJ_G0021662.1 mouse_genomes_project 15 101986245 101991563 + MGP_WSBEiJ_P0041695 Gm5475 protein_coding protein_coding MGP_WSBEiJ_T0041696.1 MGP_WSBEiJ_G0021662.1 mouse_genomes_project 15 101987291 101992239 + MGP_WSBEiJ_P0041696 Gm5475 protein_coding protein_coding MGP_WSBEiJ_T0040527.1 MGP_WSBEiJ_G0021302.1 mouse_genomes_project 15 76097436 76121766 - MGP_WSBEiJ_P0040527 Bop1 protein_coding protein_coding MGP_WSBEiJ_T0006699.1 MGP_WSBEiJ_G0005527.1 mouse_genomes_project 15 97234908 97264010 - D030018L15Rik lincRNA lincRNA MGP_WSBEiJ_T0006700.1 MGP_WSBEiJ_G0005527.1 mouse_genomes_project 15 97234908 97262717 - D030018L15Rik lincRNA lincRNA MGP_WSBEiJ_T0006701.1 MGP_WSBEiJ_G0005527.1 mouse_genomes_project 15 97257911 97264136 - D030018L15Rik lincRNA lincRNA MGP_WSBEiJ_T0041826.1 MGP_WSBEiJ_G0021715.1 mouse_genomes_project 15 104034239 104036528 + MGP_WSBEiJ_P0041826 Mfsd5 protein_coding protein_coding MGP_WSBEiJ_T0040119.1 MGP_WSBEiJ_G0021189.1 mouse_genomes_project 15 57726677 57727410 - MGP_WSBEiJ_P0040119 Ube2d4 protein_coding protein_coding MGP_WSBEiJ_T0040374.1 MGP_WSBEiJ_G0021272.1 mouse_genomes_project 15 75483637 75487155 - MGP_WSBEiJ_P0040374 Naprt protein_coding protein_coding MGP_WSBEiJ_T0041375.1 MGP_WSBEiJ_G0021555.1 mouse_genomes_project 15 92616350 92769151 + MGP_WSBEiJ_P0041375 Lrrk2 protein_coding protein_coding MGP_WSBEiJ_T0041376.1 MGP_WSBEiJ_G0021555.1 mouse_genomes_project 15 92616456 92768052 + MGP_WSBEiJ_P0041376 Lrrk2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041377.1 MGP_WSBEiJ_G0021555.1 mouse_genomes_project 15 92684822 92735684 + Lrrk2 protein_coding processed_transcript MGP_WSBEiJ_T0041378.1 MGP_WSBEiJ_G0021555.1 mouse_genomes_project 15 92718216 92724529 + Lrrk2 protein_coding processed_transcript MGP_WSBEiJ_T0041379.1 MGP_WSBEiJ_G0021555.1 mouse_genomes_project 15 92726415 92769057 + Lrrk2 protein_coding processed_transcript MGP_WSBEiJ_T0041380.1 MGP_WSBEiJ_G0021555.1 mouse_genomes_project 15 92760557 92769057 + Lrrk2 protein_coding retained_intron MGP_WSBEiJ_T0041126.1 MGP_WSBEiJ_G0021480.1 mouse_genomes_project 15 84696827 84720468 + MGP_WSBEiJ_P0041126 Pnpla3 protein_coding protein_coding MGP_WSBEiJ_T0041127.1 MGP_WSBEiJ_G0021480.1 mouse_genomes_project 15 84699993 84720477 + MGP_WSBEiJ_P0041127 Pnpla3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039778.1 MGP_WSBEiJ_G0021060.1 mouse_genomes_project 15 18750926 19265499 + MGP_WSBEiJ_P0039778 Cdh12 protein_coding protein_coding MGP_WSBEiJ_T0097884.1 MGP_WSBEiJ_G0036547.1 mouse_genomes_project 15 5165575 5165686 + Gm24144 snRNA snRNA MGP_WSBEiJ_T0040078.1 MGP_WSBEiJ_G0021173.1 mouse_genomes_project 15 56022597 56049674 - MGP_WSBEiJ_P0040078 Slc22a22 protein_coding protein_coding MGP_WSBEiJ_T0040079.1 MGP_WSBEiJ_G0021173.1 mouse_genomes_project 15 56022601 56261680 - MGP_WSBEiJ_P0040079 Slc22a22 protein_coding protein_coding MGP_WSBEiJ_T0040080.1 MGP_WSBEiJ_G0021173.1 mouse_genomes_project 15 56022862 56046932 - MGP_WSBEiJ_P0040080 Slc22a22 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039880.1 MGP_WSBEiJ_G0021097.1 mouse_genomes_project 15 32645959 32758320 - MGP_WSBEiJ_P0039880 Nipal2 protein_coding protein_coding MGP_WSBEiJ_T0039908.1 MGP_WSBEiJ_G0021110.1 mouse_genomes_project 15 34741648 34748285 - MGP_WSBEiJ_P0039908 Pabpc1 protein_coding protein_coding MGP_WSBEiJ_T0039909.1 MGP_WSBEiJ_G0021110.1 mouse_genomes_project 15 34741655 34758164 - MGP_WSBEiJ_P0039909 Pabpc1 protein_coding protein_coding MGP_WSBEiJ_T0039910.1 MGP_WSBEiJ_G0021110.1 mouse_genomes_project 15 34742018 34744307 - Pabpc1 protein_coding processed_transcript MGP_WSBEiJ_T0039911.1 MGP_WSBEiJ_G0021110.1 mouse_genomes_project 15 34742018 34743421 - Pabpc1 protein_coding processed_transcript MGP_WSBEiJ_T0039912.1 MGP_WSBEiJ_G0021110.1 mouse_genomes_project 15 34742195 34743731 - Pabpc1 protein_coding processed_transcript MGP_WSBEiJ_T0039913.1 MGP_WSBEiJ_G0021110.1 mouse_genomes_project 15 34748287 34757697 - MGP_WSBEiJ_P0039913 Pabpc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039914.1 MGP_WSBEiJ_G0021110.1 mouse_genomes_project 15 34752832 34758164 - Pabpc1 protein_coding processed_transcript MGP_WSBEiJ_T0041416.1 MGP_WSBEiJ_G0021565.1 mouse_genomes_project 15 95623820 95645776 - MGP_WSBEiJ_P0041416 Pus7l protein_coding protein_coding MGP_WSBEiJ_T0041417.1 MGP_WSBEiJ_G0021565.1 mouse_genomes_project 15 95638388 95645722 - Pus7l protein_coding retained_intron MGP_WSBEiJ_T0041418.1 MGP_WSBEiJ_G0021565.1 mouse_genomes_project 15 95642956 95645715 - MGP_WSBEiJ_P0041418 Pus7l protein_coding protein_coding MGP_WSBEiJ_T0040395.1 MGP_WSBEiJ_G0021276.1 mouse_genomes_project 15 75517320 75522367 - MGP_WSBEiJ_P0040395 Tsta3 protein_coding protein_coding MGP_WSBEiJ_T0040573.1 MGP_WSBEiJ_G0021315.1 mouse_genomes_project 15 76324063 76325728 - MGP_WSBEiJ_P0040573 Foxh1 protein_coding protein_coding MGP_WSBEiJ_T0012813.1 MGP_WSBEiJ_G0010943.1 mouse_genomes_project 15 96879680 96879923 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040869.1 MGP_WSBEiJ_G0021402.1 mouse_genomes_project 15 80116093 80135262 - MGP_WSBEiJ_P0040869 Pdgfb protein_coding protein_coding MGP_WSBEiJ_T0041613.1 MGP_WSBEiJ_G0021636.1 mouse_genomes_project 15 100750068 100803214 - MGP_WSBEiJ_P0041613 Fmnl3 protein_coding protein_coding MGP_WSBEiJ_T0041614.1 MGP_WSBEiJ_G0021636.1 mouse_genomes_project 15 100750068 100803181 - MGP_WSBEiJ_P0041614 Fmnl3 protein_coding protein_coding MGP_WSBEiJ_T0041615.1 MGP_WSBEiJ_G0021636.1 mouse_genomes_project 15 100750068 100803181 - MGP_WSBEiJ_P0041615 Fmnl3 protein_coding protein_coding MGP_WSBEiJ_T0041616.1 MGP_WSBEiJ_G0021636.1 mouse_genomes_project 15 100757251 100758519 - Fmnl3 protein_coding retained_intron MGP_WSBEiJ_T0041617.1 MGP_WSBEiJ_G0021636.1 mouse_genomes_project 15 100760634 100768520 - Fmnl3 protein_coding processed_transcript MGP_WSBEiJ_T0039920.1 MGP_WSBEiJ_G0021112.1 mouse_genomes_project 15 35034798 35044095 - MGP_WSBEiJ_P0039920 Gm10384 protein_coding protein_coding MGP_WSBEiJ_T0040648.1 MGP_WSBEiJ_G0021342.1 mouse_genomes_project 15 77655854 77667706 - MGP_WSBEiJ_P0040648 Apol8 protein_coding protein_coding MGP_WSBEiJ_T0040649.1 MGP_WSBEiJ_G0021342.1 mouse_genomes_project 15 77656670 77669893 - MGP_WSBEiJ_P0040649 Apol8 protein_coding protein_coding MGP_WSBEiJ_T0006703.1 MGP_WSBEiJ_G0005529.1 mouse_genomes_project 15 97422765 97433766 - 4833422M21Rik lincRNA lincRNA MGP_WSBEiJ_T0006704.1 MGP_WSBEiJ_G0005529.1 mouse_genomes_project 15 97422765 97450630 - 4833422M21Rik lincRNA lincRNA MGP_WSBEiJ_T0006705.1 MGP_WSBEiJ_G0005529.1 mouse_genomes_project 15 97444979 97450562 - 4833422M21Rik lincRNA lincRNA MGP_WSBEiJ_T0039824.1 MGP_WSBEiJ_G0021078.1 mouse_genomes_project 15 29252169 29331199 - MGP_WSBEiJ_P0039824 Ankrd33b protein_coding protein_coding MGP_WSBEiJ_T0039825.1 MGP_WSBEiJ_G0021078.1 mouse_genomes_project 15 29252170 29331166 - MGP_WSBEiJ_P0039825 Ankrd33b protein_coding protein_coding MGP_WSBEiJ_T0039826.1 MGP_WSBEiJ_G0021078.1 mouse_genomes_project 15 29253877 29330972 - MGP_WSBEiJ_P0039826 Ankrd33b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039827.1 MGP_WSBEiJ_G0021078.1 mouse_genomes_project 15 29254786 29331166 - MGP_WSBEiJ_P0039827 Ankrd33b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039828.1 MGP_WSBEiJ_G0021078.1 mouse_genomes_project 15 29284380 29331008 - MGP_WSBEiJ_P0039828 Ankrd33b protein_coding protein_coding MGP_WSBEiJ_T0040795.1 MGP_WSBEiJ_G0021383.1 mouse_genomes_project 15 79408702 79420258 + MGP_WSBEiJ_P0040795 Maff protein_coding protein_coding MGP_WSBEiJ_T0040796.1 MGP_WSBEiJ_G0021383.1 mouse_genomes_project 15 79409222 79420258 + MGP_WSBEiJ_P0040796 Maff protein_coding protein_coding MGP_WSBEiJ_T0041885.1 MGP_WSBEiJ_G0021729.1 mouse_genomes_project 15 104304705 104407488 - MGP_WSBEiJ_P0041885 Atf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040558.1 MGP_WSBEiJ_G0021311.1 mouse_genomes_project 15 76267513 76271973 - MGP_WSBEiJ_P0040558 Slc39a4 protein_coding protein_coding MGP_WSBEiJ_T0003538.1 MGP_WSBEiJ_G0003211.1 mouse_genomes_project 15 75242091 75244213 + Gm15945 antisense antisense MGP_WSBEiJ_T0006678.1 MGP_WSBEiJ_G0005510.1 mouse_genomes_project 15 66355402 66510095 + lincRNA lincRNA MGP_WSBEiJ_T0041579.1 MGP_WSBEiJ_G0021623.1 mouse_genomes_project 15 100300951 100318653 - MGP_WSBEiJ_P0041579 Lmbr1l protein_coding protein_coding MGP_WSBEiJ_T0041580.1 MGP_WSBEiJ_G0021623.1 mouse_genomes_project 15 100303201 100307041 - Lmbr1l protein_coding processed_transcript MGP_WSBEiJ_T0041581.1 MGP_WSBEiJ_G0021623.1 mouse_genomes_project 15 100305276 100307367 - Lmbr1l protein_coding retained_intron MGP_WSBEiJ_T0041582.1 MGP_WSBEiJ_G0021623.1 mouse_genomes_project 15 100305983 100307564 - Lmbr1l protein_coding retained_intron MGP_WSBEiJ_T0041583.1 MGP_WSBEiJ_G0021623.1 mouse_genomes_project 15 100311605 100318528 - Lmbr1l protein_coding processed_transcript MGP_WSBEiJ_T0041584.1 MGP_WSBEiJ_G0021623.1 mouse_genomes_project 15 100313279 100318223 - Lmbr1l protein_coding processed_transcript MGP_WSBEiJ_T0097889.1 MGP_WSBEiJ_G0036552.1 mouse_genomes_project 15 28549412 28549475 + Gm24487 snRNA snRNA MGP_WSBEiJ_T0041792.1 MGP_WSBEiJ_G0021700.1 mouse_genomes_project 15 103606287 103614838 - MGP_WSBEiJ_P0041792 Krt76 protein_coding protein_coding MGP_WSBEiJ_T0009890.1 MGP_WSBEiJ_G0008047.1 mouse_genomes_project 15 52312697 52312772 - Mir28c miRNA miRNA MGP_WSBEiJ_T0039861.1 MGP_WSBEiJ_G0021092.1 mouse_genomes_project 15 32414280 32421954 - MGP_WSBEiJ_P0039861 9430069I07Rik protein_coding protein_coding MGP_WSBEiJ_T0099161.1 MGP_WSBEiJ_G0037824.1 mouse_genomes_project 15 56873683 56873819 - Gm22299 snoRNA snoRNA MGP_WSBEiJ_T0041536.1 MGP_WSBEiJ_G0021605.1 mouse_genomes_project 15 99841374 99848750 + MGP_WSBEiJ_P0041536 Olfr279 protein_coding protein_coding MGP_WSBEiJ_T0041537.1 MGP_WSBEiJ_G0021605.1 mouse_genomes_project 15 99847817 99848750 + MGP_WSBEiJ_P0041537 Olfr279 protein_coding protein_coding MGP_WSBEiJ_T0041598.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100726152 100738815 + MGP_WSBEiJ_P0041598 Prpf40b protein_coding protein_coding MGP_WSBEiJ_T0041599.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100726304 100749862 + Prpf40b protein_coding retained_intron MGP_WSBEiJ_T0041600.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100726306 100748958 + Prpf40b protein_coding retained_intron MGP_WSBEiJ_T0041601.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100726306 100748958 + Prpf40b protein_coding retained_intron MGP_WSBEiJ_T0041602.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100726309 100739927 + MGP_WSBEiJ_P0041602 Prpf40b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041603.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100726336 100749862 + MGP_WSBEiJ_P0041603 Prpf40b protein_coding protein_coding MGP_WSBEiJ_T0041604.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100728756 100749854 + MGP_WSBEiJ_P0041604 Prpf40b protein_coding protein_coding MGP_WSBEiJ_T0041605.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100736146 100749343 + MGP_WSBEiJ_P0041605 Prpf40b protein_coding protein_coding MGP_WSBEiJ_T0041606.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100736147 100749851 + MGP_WSBEiJ_P0041606 Prpf40b protein_coding protein_coding MGP_WSBEiJ_T0041607.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100740734 100747936 + Prpf40b protein_coding retained_intron MGP_WSBEiJ_T0041608.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100742752 100748733 + Prpf40b protein_coding retained_intron MGP_WSBEiJ_T0041609.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100747710 100748637 + Prpf40b protein_coding retained_intron MGP_WSBEiJ_T0041610.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100747719 100749515 + MGP_WSBEiJ_P0041610 Prpf40b protein_coding protein_coding MGP_WSBEiJ_T0041611.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100747748 100749657 + MGP_WSBEiJ_P0041611 Prpf40b protein_coding protein_coding MGP_WSBEiJ_T0041612.1 MGP_WSBEiJ_G0021635.1 mouse_genomes_project 15 100748382 100749854 + MGP_WSBEiJ_P0041612 Prpf40b protein_coding protein_coding MGP_WSBEiJ_T0011194.1 MGP_WSBEiJ_G0009351.1 mouse_genomes_project 15 86808549 86808817 + Gm24011 misc_RNA misc_RNA MGP_WSBEiJ_T0041594.1 MGP_WSBEiJ_G0021631.1 mouse_genomes_project 15 100541913 100629599 + MGP_WSBEiJ_P0041594 Spats2 protein_coding protein_coding MGP_WSBEiJ_T0003563.1 MGP_WSBEiJ_G0003230.1 mouse_genomes_project 15 101409953 101411939 + Gm21917 antisense antisense MGP_WSBEiJ_T0003564.1 MGP_WSBEiJ_G0003230.1 mouse_genomes_project 15 101409953 101432504 + Gm21917 antisense antisense MGP_WSBEiJ_T0003531.1 MGP_WSBEiJ_G0003205.1 mouse_genomes_project 15 65393561 65396888 + Gm27242 antisense antisense MGP_WSBEiJ_T0041595.1 MGP_WSBEiJ_G0021632.1 mouse_genomes_project 15 100643684 100669273 + MGP_WSBEiJ_P0041595 Kcnh3 protein_coding protein_coding MGP_WSBEiJ_T0012782.1 MGP_WSBEiJ_G0010912.1 mouse_genomes_project 15 46081632 46085129 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009933.1 MGP_WSBEiJ_G0008090.1 mouse_genomes_project 15 102827251 102827314 + Mir6962 miRNA miRNA MGP_WSBEiJ_T0040880.1 MGP_WSBEiJ_G0021405.1 mouse_genomes_project 15 80273919 80304239 + MGP_WSBEiJ_P0040880 Tab1 protein_coding protein_coding MGP_WSBEiJ_T0040248.1 MGP_WSBEiJ_G0021229.1 mouse_genomes_project 15 72388463 72480977 - MGP_WSBEiJ_P0040248 Ago2 protein_coding protein_coding MGP_WSBEiJ_T0009931.1 MGP_WSBEiJ_G0008088.1 mouse_genomes_project 15 100491876 100491937 + Mir6960 miRNA miRNA MGP_WSBEiJ_T0039653.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6036212 6077065 + Nadk2 protein_coding processed_transcript MGP_WSBEiJ_T0039654.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6036212 6077065 + MGP_WSBEiJ_P0039654 Nadk2 protein_coding protein_coding MGP_WSBEiJ_T0039655.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6036212 6077065 + MGP_WSBEiJ_P0039655 Nadk2 protein_coding protein_coding MGP_WSBEiJ_T0039656.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6037739 6074933 + MGP_WSBEiJ_P0039656 Nadk2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039657.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6037918 6076438 + Nadk2 protein_coding processed_transcript MGP_WSBEiJ_T0039658.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6037924 6073750 + Nadk2 protein_coding processed_transcript MGP_WSBEiJ_T0039659.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6051722 6073415 + Nadk2 protein_coding processed_transcript MGP_WSBEiJ_T0039660.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6065737 6073756 + MGP_WSBEiJ_P0039660 Nadk2 protein_coding protein_coding MGP_WSBEiJ_T0039661.1 MGP_WSBEiJ_G0021025.1 mouse_genomes_project 15 6068557 6073348 + Nadk2 protein_coding retained_intron MGP_WSBEiJ_T0097909.1 MGP_WSBEiJ_G0036572.1 mouse_genomes_project 15 71989022 71989089 - Gm28020 snRNA snRNA MGP_WSBEiJ_T0040172.1 MGP_WSBEiJ_G0021209.1 mouse_genomes_project 15 64098691 64135461 - MGP_WSBEiJ_P0040172 Gm21961 protein_coding protein_coding MGP_WSBEiJ_T0099156.1 MGP_WSBEiJ_G0037819.1 mouse_genomes_project 15 42641588 42641720 + Gm25093 snoRNA snoRNA MGP_WSBEiJ_T0039726.1 MGP_WSBEiJ_G0021045.1 mouse_genomes_project 15 8159687 8462976 + MGP_WSBEiJ_P0039726 Adamts12 protein_coding protein_coding MGP_WSBEiJ_T0100583.1 MGP_WSBEiJ_G0039041.1 mouse_genomes_project 15 74787382 74787594 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0041268.1 MGP_WSBEiJ_G0021526.1 mouse_genomes_project 15 89956053 89963155 - MGP_WSBEiJ_P0041268 Mapk11 protein_coding protein_coding MGP_WSBEiJ_T0009916.1 MGP_WSBEiJ_G0008073.1 mouse_genomes_project 15 83013898 83013955 - Gm27463 miRNA miRNA MGP_WSBEiJ_T0041730.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102466401 102539765 + MGP_WSBEiJ_P0041730 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041731.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102466401 102539765 + MGP_WSBEiJ_P0041731 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041732.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102467188 102621727 + MGP_WSBEiJ_P0041732 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041733.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102467204 102539765 + MGP_WSBEiJ_P0041733 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041734.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102467226 102656473 + MGP_WSBEiJ_P0041734 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041735.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102468395 102656482 + MGP_WSBEiJ_P0041735 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041736.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102468436 102652242 + MGP_WSBEiJ_P0041736 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041737.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102468443 102652159 + MGP_WSBEiJ_P0041737 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041738.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102468911 102539765 + MGP_WSBEiJ_P0041738 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041739.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102536683 102545275 + MGP_WSBEiJ_P0041739 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041740.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102539708 102656473 + MGP_WSBEiJ_P0041740 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041741.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102539743 102544898 + MGP_WSBEiJ_P0041741 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041742.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102539762 102651235 + MGP_WSBEiJ_P0041742 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041743.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102560877 102568841 + MGP_WSBEiJ_P0041743 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041744.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102564382 102567164 + Scn8a protein_coding retained_intron MGP_WSBEiJ_T0041745.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102564417 102567011 + Scn8a protein_coding retained_intron MGP_WSBEiJ_T0041746.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102564546 102611631 + MGP_WSBEiJ_P0041746 Scn8a protein_coding protein_coding MGP_WSBEiJ_T0041747.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102576913 102578554 + Scn8a protein_coding retained_intron MGP_WSBEiJ_T0041748.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102578438 102584333 + Scn8a protein_coding retained_intron MGP_WSBEiJ_T0041749.1 MGP_WSBEiJ_G0021673.1 mouse_genomes_project 15 102626562 102640401 + Scn8a protein_coding processed_transcript MGP_WSBEiJ_T0003554.1 MGP_WSBEiJ_G0003221.1 mouse_genomes_project 15 99050242 99058430 + Rapgef3os1 antisense antisense MGP_WSBEiJ_T0041171.1 MGP_WSBEiJ_G0021499.1 mouse_genomes_project 15 86151826 86196501 - MGP_WSBEiJ_P0041171 Wnt7b protein_coding protein_coding MGP_WSBEiJ_T0041172.1 MGP_WSBEiJ_G0021499.1 mouse_genomes_project 15 86151830 86200730 - MGP_WSBEiJ_P0041172 Wnt7b protein_coding protein_coding MGP_WSBEiJ_T0016872.1 MGP_WSBEiJ_G0014720.1 mouse_genomes_project 15 67485890 67488606 - Gm26621 processed_transcript TEC MGP_WSBEiJ_T0016873.1 MGP_WSBEiJ_G0014720.1 mouse_genomes_project 15 67486311 67488586 - Gm26621 processed_transcript processed_transcript MGP_WSBEiJ_T0039777.1 MGP_WSBEiJ_G0021059.1 mouse_genomes_project 15 18276800 18278332 - MGP_WSBEiJ_P0039777 Acot10 protein_coding protein_coding MGP_WSBEiJ_T0040068.1 MGP_WSBEiJ_G0021170.1 mouse_genomes_project 15 54299861 54369620 + MGP_WSBEiJ_P0040068 Mtbp protein_coding protein_coding MGP_WSBEiJ_T0040069.1 MGP_WSBEiJ_G0021170.1 mouse_genomes_project 15 54300048 54351299 + MGP_WSBEiJ_P0040069 Mtbp protein_coding protein_coding MGP_WSBEiJ_T0040070.1 MGP_WSBEiJ_G0021170.1 mouse_genomes_project 15 54300188 54311519 + MGP_WSBEiJ_P0040070 Mtbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040071.1 MGP_WSBEiJ_G0021170.1 mouse_genomes_project 15 54318014 54369619 + MGP_WSBEiJ_P0040071 Mtbp protein_coding protein_coding MGP_WSBEiJ_T0040072.1 MGP_WSBEiJ_G0021170.1 mouse_genomes_project 15 54360765 54363118 + Mtbp protein_coding retained_intron MGP_WSBEiJ_T0040073.1 MGP_WSBEiJ_G0021170.1 mouse_genomes_project 15 54364631 54369618 + Mtbp protein_coding processed_transcript MGP_WSBEiJ_T0041451.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99033409 99059315 - MGP_WSBEiJ_P0041451 Rapgef3 protein_coding protein_coding MGP_WSBEiJ_T0041452.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99033592 99059267 - MGP_WSBEiJ_P0041452 Rapgef3 protein_coding protein_coding MGP_WSBEiJ_T0041453.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99033595 99059133 - MGP_WSBEiJ_P0041453 Rapgef3 protein_coding protein_coding MGP_WSBEiJ_T0041454.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99033655 99058531 - MGP_WSBEiJ_P0041454 Rapgef3 protein_coding protein_coding MGP_WSBEiJ_T0041455.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99033803 99059135 - MGP_WSBEiJ_P0041455 Rapgef3 protein_coding protein_coding MGP_WSBEiJ_T0041456.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99033920 99058889 - MGP_WSBEiJ_P0041456 Rapgef3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041457.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99034003 99037483 - Rapgef3 protein_coding retained_intron MGP_WSBEiJ_T0041458.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99035159 99059056 - Rapgef3 protein_coding retained_intron MGP_WSBEiJ_T0041459.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99038317 99039315 - Rapgef3 protein_coding retained_intron MGP_WSBEiJ_T0041460.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99038967 99047337 - Rapgef3 protein_coding retained_intron MGP_WSBEiJ_T0041462.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99048731 99050260 - Rapgef3 protein_coding processed_transcript MGP_WSBEiJ_T0041463.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99049193 99058515 - MGP_WSBEiJ_P0041463 Rapgef3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041464.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99049198 99051713 - Rapgef3 protein_coding processed_transcript MGP_WSBEiJ_T0041465.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99050508 99058733 - MGP_WSBEiJ_P0041465 Rapgef3 protein_coding protein_coding MGP_WSBEiJ_T0041466.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99050531 99051688 - Rapgef3 protein_coding retained_intron MGP_WSBEiJ_T0041467.1 MGP_WSBEiJ_G0021584.1 mouse_genomes_project 15 99058327 99059441 - MGP_WSBEiJ_P0041467 Rapgef3 protein_coding protein_coding MGP_WSBEiJ_T0041139.1 MGP_WSBEiJ_G0021484.1 mouse_genomes_project 15 84926927 85001380 - MGP_WSBEiJ_P0041139 1810041L15Rik protein_coding protein_coding MGP_WSBEiJ_T0041140.1 MGP_WSBEiJ_G0021484.1 mouse_genomes_project 15 84927773 84999772 - MGP_WSBEiJ_P0041140 1810041L15Rik protein_coding protein_coding MGP_WSBEiJ_T0041141.1 MGP_WSBEiJ_G0021484.1 mouse_genomes_project 15 84954284 84999837 - MGP_WSBEiJ_P0041141 1810041L15Rik protein_coding protein_coding MGP_WSBEiJ_T0041142.1 MGP_WSBEiJ_G0021484.1 mouse_genomes_project 15 84965085 84994624 - MGP_WSBEiJ_P0041142 1810041L15Rik protein_coding protein_coding MGP_WSBEiJ_T0041190.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86520171 86533420 + MGP_WSBEiJ_P0041190 Trmu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041191.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86520179 86538180 + MGP_WSBEiJ_P0041191 Trmu protein_coding protein_coding MGP_WSBEiJ_T0041192.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86520240 86523706 + MGP_WSBEiJ_P0041192 Trmu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041193.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86520273 86534776 + Trmu protein_coding retained_intron MGP_WSBEiJ_T0041194.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86526026 86537214 + MGP_WSBEiJ_P0041194 Trmu protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041195.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86533398 86535293 + Trmu protein_coding retained_intron MGP_WSBEiJ_T0041196.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86535023 86538180 + Trmu protein_coding processed_transcript MGP_WSBEiJ_T0041197.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86535567 86537847 + Trmu protein_coding retained_intron MGP_WSBEiJ_T0041198.1 MGP_WSBEiJ_G0021505.1 mouse_genomes_project 15 86535697 86538182 + Trmu protein_coding retained_intron MGP_WSBEiJ_T0016878.1 MGP_WSBEiJ_G0014724.1 mouse_genomes_project 15 79373144 79374512 + Gm20420 processed_transcript processed_transcript MGP_WSBEiJ_T0009929.1 MGP_WSBEiJ_G0008086.1 mouse_genomes_project 15 97622422 97622514 + Gm25397 miRNA miRNA MGP_WSBEiJ_T0039989.1 MGP_WSBEiJ_G0021138.1 mouse_genomes_project 15 41508127 41540859 - MGP_WSBEiJ_P0039989 Eif3e protein_coding protein_coding MGP_WSBEiJ_T0041674.1 MGP_WSBEiJ_G0021655.1 mouse_genomes_project 15 101736809 101757119 + MGP_WSBEiJ_P0041674 Atf1 protein_coding protein_coding MGP_WSBEiJ_T0041675.1 MGP_WSBEiJ_G0021655.1 mouse_genomes_project 15 101736821 101737664 + Atf1 protein_coding retained_intron MGP_WSBEiJ_T0041676.1 MGP_WSBEiJ_G0021655.1 mouse_genomes_project 15 101736848 101760970 + MGP_WSBEiJ_P0041676 Atf1 protein_coding protein_coding MGP_WSBEiJ_T0041677.1 MGP_WSBEiJ_G0021655.1 mouse_genomes_project 15 101737383 101767955 + MGP_WSBEiJ_P0041677 Atf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041678.1 MGP_WSBEiJ_G0021655.1 mouse_genomes_project 15 101737401 101767998 + Atf1 protein_coding processed_transcript MGP_WSBEiJ_T0041679.1 MGP_WSBEiJ_G0021655.1 mouse_genomes_project 15 101760725 101766448 + MGP_WSBEiJ_P0041679 Atf1 protein_coding protein_coding MGP_WSBEiJ_T0040971.1 MGP_WSBEiJ_G0021428.1 mouse_genomes_project 15 81964259 81992662 - MGP_WSBEiJ_P0040971 Rangap1 protein_coding protein_coding MGP_WSBEiJ_T0040972.1 MGP_WSBEiJ_G0021428.1 mouse_genomes_project 15 81964259 81992662 - MGP_WSBEiJ_P0040972 Rangap1 protein_coding protein_coding MGP_WSBEiJ_T0040973.1 MGP_WSBEiJ_G0021428.1 mouse_genomes_project 15 81964628 81992609 - MGP_WSBEiJ_P0040973 Rangap1 protein_coding protein_coding MGP_WSBEiJ_T0012781.1 MGP_WSBEiJ_G0010911.1 mouse_genomes_project 15 44309475 44311146 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009876.1 MGP_WSBEiJ_G0008033.1 mouse_genomes_project 15 25425398 25425463 + Mir7117 miRNA miRNA MGP_WSBEiJ_T0041569.1 MGP_WSBEiJ_G0021618.1 mouse_genomes_project 15 100196268 100201104 - MGP_WSBEiJ_P0041569 Ddn protein_coding protein_coding MGP_WSBEiJ_T0040449.1 MGP_WSBEiJ_G0021288.1 mouse_genomes_project 15 75844803 75847353 - MGP_WSBEiJ_P0040449 Parp10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040450.1 MGP_WSBEiJ_G0021288.1 mouse_genomes_project 15 75846632 75858974 - Parp10 protein_coding retained_intron MGP_WSBEiJ_T0040451.1 MGP_WSBEiJ_G0021288.1 mouse_genomes_project 15 75846632 75858960 - MGP_WSBEiJ_P0040451 Parp10 protein_coding protein_coding MGP_WSBEiJ_T0040452.1 MGP_WSBEiJ_G0021288.1 mouse_genomes_project 15 75846632 75858981 - MGP_WSBEiJ_P0040452 Parp10 protein_coding protein_coding MGP_WSBEiJ_T0040453.1 MGP_WSBEiJ_G0021288.1 mouse_genomes_project 15 75847019 75847883 - Parp10 protein_coding processed_transcript MGP_WSBEiJ_T0040454.1 MGP_WSBEiJ_G0021288.1 mouse_genomes_project 15 75847368 75848104 - Parp10 protein_coding retained_intron MGP_WSBEiJ_T0041021.1 MGP_WSBEiJ_G0021440.1 mouse_genomes_project 15 82354823 82362210 + MGP_WSBEiJ_P0041021 4930407I10Rik protein_coding protein_coding MGP_WSBEiJ_T0097892.1 MGP_WSBEiJ_G0036555.1 mouse_genomes_project 15 34328893 34328956 + Gm23754 snRNA snRNA MGP_WSBEiJ_T0009936.1 MGP_WSBEiJ_G0008093.1 mouse_genomes_project 15 103279205 103279334 + Gm44460 miRNA miRNA MGP_WSBEiJ_T0097901.1 MGP_WSBEiJ_G0036564.1 mouse_genomes_project 15 52070505 52070571 + Gm27926 snRNA snRNA MGP_WSBEiJ_T0003560.1 MGP_WSBEiJ_G0003227.1 mouse_genomes_project 15 101166278 101176798 - Gm16537 antisense antisense MGP_WSBEiJ_T0099166.1 MGP_WSBEiJ_G0037829.1 mouse_genomes_project 15 68623820 68623952 - Gm24232 snoRNA snoRNA MGP_WSBEiJ_T0012759.1 MGP_WSBEiJ_G0010889.1 mouse_genomes_project 15 2054994 2056229 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040974.1 MGP_WSBEiJ_G0021429.1 mouse_genomes_project 15 82009999 82062181 + MGP_WSBEiJ_P0040974 Zc3h7b protein_coding protein_coding MGP_WSBEiJ_T0039988.1 MGP_WSBEiJ_G0021137.1 mouse_genomes_project 15 41265654 41421974 - MGP_WSBEiJ_P0039988 Rspo2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0100587.1 MGP_WSBEiJ_G0039045.1 mouse_genomes_project 15 74860821 74862999 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009902.1 MGP_WSBEiJ_G0008059.1 mouse_genomes_project 15 78907991 78908065 + Mir6955 miRNA miRNA MGP_WSBEiJ_T0041867.1 MGP_WSBEiJ_G0021726.1 mouse_genomes_project 15 104283049 104283214 + MGP_WSBEiJ_P0041867 Gm10337 protein_coding protein_coding MGP_WSBEiJ_T0041381.1 MGP_WSBEiJ_G0021556.1 mouse_genomes_project 15 92792825 92824881 + MGP_WSBEiJ_P0041381 protein_coding protein_coding MGP_WSBEiJ_T0041382.1 MGP_WSBEiJ_G0021556.1 mouse_genomes_project 15 92792888 92825250 + MGP_WSBEiJ_P0041382 protein_coding protein_coding MGP_WSBEiJ_T0041383.1 MGP_WSBEiJ_G0021556.1 mouse_genomes_project 15 92792896 92801246 + MGP_WSBEiJ_P0041383 protein_coding protein_coding MGP_WSBEiJ_T0041384.1 MGP_WSBEiJ_G0021556.1 mouse_genomes_project 15 92795978 92825252 + MGP_WSBEiJ_P0041384 protein_coding protein_coding MGP_WSBEiJ_T0041385.1 MGP_WSBEiJ_G0021556.1 mouse_genomes_project 15 92798915 92825254 + MGP_WSBEiJ_P0041385 protein_coding protein_coding MGP_WSBEiJ_T0041386.1 MGP_WSBEiJ_G0021556.1 mouse_genomes_project 15 92801160 92825254 + MGP_WSBEiJ_P0041386 protein_coding protein_coding MGP_WSBEiJ_T0012800.1 MGP_WSBEiJ_G0010930.1 mouse_genomes_project 15 79305935 79306310 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097494.1 MGP_WSBEiJ_G0036161.1 mouse_genomes_project 15 89694824 89696552 - Gm20621 sense_overlapping sense_overlapping MGP_WSBEiJ_T0097495.1 MGP_WSBEiJ_G0036161.1 mouse_genomes_project 15 89695543 89696561 - Gm20621 sense_overlapping sense_overlapping MGP_WSBEiJ_T0097496.1 MGP_WSBEiJ_G0036161.1 mouse_genomes_project 15 89695548 89696519 - Gm20621 sense_overlapping sense_overlapping MGP_WSBEiJ_T0009912.1 MGP_WSBEiJ_G0008069.1 mouse_genomes_project 15 82502338 82502407 + Mir33 miRNA miRNA MGP_WSBEiJ_T0097292.1 MGP_WSBEiJ_G0035969.1 mouse_genomes_project 15 96218362 96290449 - 1700129L04Rik sense_intronic sense_intronic MGP_WSBEiJ_T0097293.1 MGP_WSBEiJ_G0035969.1 mouse_genomes_project 15 96218436 96276038 - 1700129L04Rik sense_intronic sense_intronic MGP_WSBEiJ_T0012765.1 MGP_WSBEiJ_G0010895.1 mouse_genomes_project 15 10665035 10666779 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041031.1 MGP_WSBEiJ_G0021446.1 mouse_genomes_project 15 82549467 82560423 - MGP_WSBEiJ_P0041031 Cenpm protein_coding protein_coding MGP_WSBEiJ_T0041032.1 MGP_WSBEiJ_G0021446.1 mouse_genomes_project 15 82549467 82560423 - MGP_WSBEiJ_P0041032 Cenpm protein_coding protein_coding MGP_WSBEiJ_T0040121.1 MGP_WSBEiJ_G0021191.1 mouse_genomes_project 15 57770693 57784907 + MGP_WSBEiJ_P0040121 Rnf139 protein_coding protein_coding MGP_WSBEiJ_T0041782.1 MGP_WSBEiJ_G0021691.1 mouse_genomes_project 15 103336350 103341147 - MGP_WSBEiJ_P0041782 Gm5414 protein_coding protein_coding MGP_WSBEiJ_T0100582.1 MGP_WSBEiJ_G0039040.1 mouse_genomes_project 15 74787382 74790528 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0009881.1 MGP_WSBEiJ_G0008038.1 mouse_genomes_project 15 34729608 34729734 + Gm44310 miRNA miRNA MGP_WSBEiJ_T0006702.1 MGP_WSBEiJ_G0005528.1 mouse_genomes_project 15 97322473 97479936 - 2610037D02Rik lincRNA lincRNA MGP_WSBEiJ_T0006706.1 MGP_WSBEiJ_G0005528.1 mouse_genomes_project 15 97477826 97480823 - 2610037D02Rik lincRNA lincRNA MGP_WSBEiJ_T0040346.1 MGP_WSBEiJ_G0021262.1 mouse_genomes_project 15 74977358 75079197 + MGP_WSBEiJ_P0040346 Ly6l protein_coding protein_coding MGP_WSBEiJ_T0099170.1 MGP_WSBEiJ_G0037833.1 mouse_genomes_project 15 80208739 80208833 - Snord83b snoRNA snoRNA MGP_WSBEiJ_T0040539.1 MGP_WSBEiJ_G0021306.1 mouse_genomes_project 15 76164565 76170492 - MGP_WSBEiJ_P0040539 Scrt1 protein_coding protein_coding MGP_WSBEiJ_T0040540.1 MGP_WSBEiJ_G0021306.1 mouse_genomes_project 15 76164575 76170265 - MGP_WSBEiJ_P0040540 Scrt1 protein_coding protein_coding MGP_WSBEiJ_T0041833.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104090934 104097592 + MGP_WSBEiJ_P0041833 Myg1 protein_coding protein_coding MGP_WSBEiJ_T0041834.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104090945 104091822 + Myg1 protein_coding retained_intron MGP_WSBEiJ_T0041835.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104090963 104097249 + Myg1 protein_coding retained_intron MGP_WSBEiJ_T0041836.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104090975 104097232 + MGP_WSBEiJ_P0041836 Myg1 protein_coding protein_coding MGP_WSBEiJ_T0041837.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104090980 104097144 + MGP_WSBEiJ_P0041837 Myg1 protein_coding protein_coding MGP_WSBEiJ_T0041838.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104091142 104096593 + Myg1 protein_coding retained_intron MGP_WSBEiJ_T0041839.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104091655 104096254 + Myg1 protein_coding processed_transcript MGP_WSBEiJ_T0041840.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104093022 104096278 + Myg1 protein_coding retained_intron MGP_WSBEiJ_T0041841.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104096147 104097249 + Myg1 protein_coding retained_intron MGP_WSBEiJ_T0041842.1 MGP_WSBEiJ_G0021718.1 mouse_genomes_project 15 104096430 104097188 + Myg1 protein_coding retained_intron MGP_WSBEiJ_T0003562.1 MGP_WSBEiJ_G0003229.1 mouse_genomes_project 15 101277969 101294203 + Gm17057 antisense antisense MGP_WSBEiJ_T0016888.1 MGP_WSBEiJ_G0014729.1 mouse_genomes_project 15 92836788 92861500 + processed_transcript processed_transcript MGP_WSBEiJ_T0016889.1 MGP_WSBEiJ_G0014729.1 mouse_genomes_project 15 92843883 92876065 + processed_transcript processed_transcript MGP_WSBEiJ_T0040597.1 MGP_WSBEiJ_G0021321.1 mouse_genomes_project 15 76376826 76384760 - MGP_WSBEiJ_P0040597 Lrrc24 protein_coding protein_coding MGP_WSBEiJ_T0040598.1 MGP_WSBEiJ_G0021321.1 mouse_genomes_project 15 76377757 76379966 - Lrrc24 protein_coding retained_intron MGP_WSBEiJ_T0040599.1 MGP_WSBEiJ_G0021321.1 mouse_genomes_project 15 76382180 76384746 - Lrrc24 protein_coding retained_intron MGP_WSBEiJ_T0040600.1 MGP_WSBEiJ_G0021321.1 mouse_genomes_project 15 76384048 76386423 - MGP_WSBEiJ_P0040600 Lrrc24 protein_coding protein_coding MGP_WSBEiJ_T0041409.1 MGP_WSBEiJ_G0021563.1 mouse_genomes_project 15 94550638 94574221 - MGP_WSBEiJ_P0041409 Prickle1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041410.1 MGP_WSBEiJ_G0021563.1 mouse_genomes_project 15 94550647 94664216 - MGP_WSBEiJ_P0041410 Prickle1 protein_coding protein_coding MGP_WSBEiJ_T0041411.1 MGP_WSBEiJ_G0021563.1 mouse_genomes_project 15 94550647 94574303 - MGP_WSBEiJ_P0041411 Prickle1 protein_coding protein_coding MGP_WSBEiJ_T0039558.1 MGP_WSBEiJ_G0020998.1 mouse_genomes_project 15 808375 825488 - MGP_WSBEiJ_P0039558 Fbxo4 protein_coding protein_coding MGP_WSBEiJ_T0039559.1 MGP_WSBEiJ_G0020998.1 mouse_genomes_project 15 813149 818499 - Fbxo4 protein_coding processed_transcript MGP_WSBEiJ_T0039560.1 MGP_WSBEiJ_G0020998.1 mouse_genomes_project 15 816922 817621 - Fbxo4 protein_coding retained_intron MGP_WSBEiJ_T0041586.1 MGP_WSBEiJ_G0021625.1 mouse_genomes_project 15 100332442 100336012 - MGP_WSBEiJ_P0041586 Tuba1b protein_coding protein_coding MGP_WSBEiJ_T0040507.1 MGP_WSBEiJ_G0021298.1 mouse_genomes_project 15 75989129 75998905 + MGP_WSBEiJ_P0040507 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0000914.1 MGP_WSBEiJ_G0000852.1 mouse_genomes_project 15 86277267 86280610 + TEC TEC MGP_WSBEiJ_T0040191.1 MGP_WSBEiJ_G0021213.1 mouse_genomes_project 15 65090541 65392869 - MGP_WSBEiJ_P0040191 Kcnq3 protein_coding protein_coding MGP_WSBEiJ_T0040192.1 MGP_WSBEiJ_G0021213.1 mouse_genomes_project 15 65129290 65203760 - Kcnq3 protein_coding processed_transcript MGP_WSBEiJ_T0040193.1 MGP_WSBEiJ_G0021213.1 mouse_genomes_project 15 65389717 65392696 - Kcnq3 protein_coding retained_intron MGP_WSBEiJ_T0040084.1 MGP_WSBEiJ_G0021176.1 mouse_genomes_project 15 56730241 56794696 + MGP_WSBEiJ_P0040084 Tbc1d31 protein_coding protein_coding MGP_WSBEiJ_T0040085.1 MGP_WSBEiJ_G0021176.1 mouse_genomes_project 15 56730276 56784036 + Tbc1d31 protein_coding processed_transcript MGP_WSBEiJ_T0040086.1 MGP_WSBEiJ_G0021176.1 mouse_genomes_project 15 56730281 56737995 + MGP_WSBEiJ_P0040086 Tbc1d31 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040087.1 MGP_WSBEiJ_G0021176.1 mouse_genomes_project 15 56731047 56784116 + Tbc1d31 protein_coding retained_intron MGP_WSBEiJ_T0040088.1 MGP_WSBEiJ_G0021176.1 mouse_genomes_project 15 56731899 56778575 + Tbc1d31 protein_coding retained_intron MGP_WSBEiJ_T0040089.1 MGP_WSBEiJ_G0021176.1 mouse_genomes_project 15 56734057 56779888 + Tbc1d31 protein_coding retained_intron MGP_WSBEiJ_T0040090.1 MGP_WSBEiJ_G0021176.1 mouse_genomes_project 15 56783046 56794702 + MGP_WSBEiJ_P0040090 Tbc1d31 protein_coding protein_coding MGP_WSBEiJ_T0039674.1 MGP_WSBEiJ_G0021030.1 mouse_genomes_project 15 6500005 6523511 + MGP_WSBEiJ_P0039674 Capsl protein_coding protein_coding MGP_WSBEiJ_T0039874.1 MGP_WSBEiJ_G0021096.1 mouse_genomes_project 15 32573364 32604204 + MGP_WSBEiJ_P0039874 Pop1 protein_coding protein_coding MGP_WSBEiJ_T0039875.1 MGP_WSBEiJ_G0021096.1 mouse_genomes_project 15 32573383 32604193 + MGP_WSBEiJ_P0039875 Pop1 protein_coding protein_coding MGP_WSBEiJ_T0039876.1 MGP_WSBEiJ_G0021096.1 mouse_genomes_project 15 32586803 32589073 + Pop1 protein_coding retained_intron MGP_WSBEiJ_T0039877.1 MGP_WSBEiJ_G0021096.1 mouse_genomes_project 15 32591050 32594866 + Pop1 protein_coding processed_transcript MGP_WSBEiJ_T0039878.1 MGP_WSBEiJ_G0021096.1 mouse_genomes_project 15 32592638 32602717 + Pop1 protein_coding retained_intron MGP_WSBEiJ_T0039879.1 MGP_WSBEiJ_G0021096.1 mouse_genomes_project 15 32599730 32602787 + Pop1 protein_coding retained_intron MGP_WSBEiJ_T0041470.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083873 99125467 - MGP_WSBEiJ_P0041470 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041471.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083875 99138478 - MGP_WSBEiJ_P0041471 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041472.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083890 99125740 - MGP_WSBEiJ_P0041472 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041473.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083896 99085658 - Hdac7 protein_coding retained_intron MGP_WSBEiJ_T0041474.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083897 99138245 - MGP_WSBEiJ_P0041474 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041475.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083897 99108986 - MGP_WSBEiJ_P0041475 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041476.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083899 99138278 - MGP_WSBEiJ_P0041476 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041477.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083921 99125467 - MGP_WSBEiJ_P0041477 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041478.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99083921 99138140 - MGP_WSBEiJ_P0041478 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041479.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99089011 99125442 - MGP_WSBEiJ_P0041479 Hdac7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041480.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99090823 99101758 - MGP_WSBEiJ_P0041480 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0041481.1 MGP_WSBEiJ_G0021586.1 mouse_genomes_project 15 99092484 99102109 - MGP_WSBEiJ_P0041481 Hdac7 protein_coding protein_coding MGP_WSBEiJ_T0016865.1 MGP_WSBEiJ_G0014716.1 mouse_genomes_project 15 59747459 59753815 + 9930014A18Rik processed_transcript antisense MGP_WSBEiJ_T0016866.1 MGP_WSBEiJ_G0014716.1 mouse_genomes_project 15 59748139 59750796 + 9930014A18Rik processed_transcript TEC MGP_WSBEiJ_T0016867.1 MGP_WSBEiJ_G0014716.1 mouse_genomes_project 15 59748588 59749126 + 9930014A18Rik processed_transcript antisense MGP_WSBEiJ_T0016868.1 MGP_WSBEiJ_G0014716.1 mouse_genomes_project 15 59749527 59757573 + 9930014A18Rik processed_transcript antisense MGP_WSBEiJ_T0000905.1 MGP_WSBEiJ_G0000843.1 mouse_genomes_project 15 9817008 9819289 - TEC TEC MGP_WSBEiJ_T0016854.1 MGP_WSBEiJ_G0014713.1 mouse_genomes_project 15 35605695 35617071 - Gm15941 processed_transcript processed_transcript MGP_WSBEiJ_T0016855.1 MGP_WSBEiJ_G0014713.1 mouse_genomes_project 15 35606674 35613252 - Gm15941 processed_transcript processed_transcript MGP_WSBEiJ_T0016856.1 MGP_WSBEiJ_G0014713.1 mouse_genomes_project 15 35606865 35616555 - Gm15941 processed_transcript processed_transcript MGP_WSBEiJ_T0016857.1 MGP_WSBEiJ_G0014713.1 mouse_genomes_project 15 35606981 35617069 - Gm15941 processed_transcript processed_transcript MGP_WSBEiJ_T0016858.1 MGP_WSBEiJ_G0014713.1 mouse_genomes_project 15 35607134 35617060 - Gm15941 processed_transcript processed_transcript MGP_WSBEiJ_T0016859.1 MGP_WSBEiJ_G0014713.1 mouse_genomes_project 15 35611779 35617821 - Gm15941 processed_transcript processed_transcript MGP_WSBEiJ_T0006651.1 MGP_WSBEiJ_G0005495.1 mouse_genomes_project 15 35177016 35217990 + Gm26766 lincRNA lincRNA MGP_WSBEiJ_T0041911.1 MGP_WSBEiJ_G0021736.1 mouse_genomes_project 15 104768239 104773350 + MGP_WSBEiJ_P0041911 Hoxc10 protein_coding protein_coding MGP_WSBEiJ_T0039948.1 MGP_WSBEiJ_G0021119.1 mouse_genomes_project 15 36434532 36442343 + MGP_WSBEiJ_P0039948 Odf1 protein_coding protein_coding MGP_WSBEiJ_T0041219.1 MGP_WSBEiJ_G0021514.1 mouse_genomes_project 15 89604265 89615171 - Alg12 protein_coding retained_intron MGP_WSBEiJ_T0041220.1 MGP_WSBEiJ_G0021514.1 mouse_genomes_project 15 89604265 89619471 - MGP_WSBEiJ_P0041220 Alg12 protein_coding protein_coding MGP_WSBEiJ_T0041221.1 MGP_WSBEiJ_G0021514.1 mouse_genomes_project 15 89604266 89619438 - MGP_WSBEiJ_P0041221 Alg12 protein_coding protein_coding MGP_WSBEiJ_T0041222.1 MGP_WSBEiJ_G0021514.1 mouse_genomes_project 15 89613607 89619245 - MGP_WSBEiJ_P0041222 Alg12 protein_coding protein_coding MGP_WSBEiJ_T0040587.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372165 76375121 + MGP_WSBEiJ_P0040587 Lrrc14 protein_coding protein_coding MGP_WSBEiJ_T0040588.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372180 76379249 + MGP_WSBEiJ_P0040588 Lrrc14 protein_coding protein_coding MGP_WSBEiJ_T0040589.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372181 76376586 + MGP_WSBEiJ_P0040589 Lrrc14 protein_coding protein_coding MGP_WSBEiJ_T0040590.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372185 76376635 + MGP_WSBEiJ_P0040590 Lrrc14 protein_coding protein_coding MGP_WSBEiJ_T0040591.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372185 76376603 + MGP_WSBEiJ_P0040591 Lrrc14 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040592.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372191 76374474 + MGP_WSBEiJ_P0040592 Lrrc14 protein_coding protein_coding MGP_WSBEiJ_T0040593.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372205 76376681 + Lrrc14 protein_coding retained_intron MGP_WSBEiJ_T0040594.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372215 76378199 + Lrrc14 protein_coding retained_intron MGP_WSBEiJ_T0040595.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372215 76376300 + Lrrc14 protein_coding processed_transcript MGP_WSBEiJ_T0040596.1 MGP_WSBEiJ_G0021320.1 mouse_genomes_project 15 76372273 76376642 + MGP_WSBEiJ_P0040596 Lrrc14 protein_coding protein_coding MGP_WSBEiJ_T0011188.1 MGP_WSBEiJ_G0009345.1 mouse_genomes_project 15 61037806 61037979 + Gm27913 misc_RNA misc_RNA MGP_WSBEiJ_T0003535.1 MGP_WSBEiJ_G0003209.1 mouse_genomes_project 15 74071971 74073185 + 4933427E11Rik antisense antisense MGP_WSBEiJ_T0003536.1 MGP_WSBEiJ_G0003209.1 mouse_genomes_project 15 74071971 74073183 + 4933427E11Rik antisense antisense MGP_WSBEiJ_T0041089.1 MGP_WSBEiJ_G0021468.1 mouse_genomes_project 15 83769885 83827116 - MGP_WSBEiJ_P0041089 Arfgap3 protein_coding protein_coding MGP_WSBEiJ_T0041090.1 MGP_WSBEiJ_G0021468.1 mouse_genomes_project 15 83770830 83827018 - MGP_WSBEiJ_P0041090 Arfgap3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0040822.1 MGP_WSBEiJ_G0021393.1 mouse_genomes_project 15 79770313 79783609 - MGP_WSBEiJ_P0040822 Josd1 protein_coding protein_coding MGP_WSBEiJ_T0041212.1 MGP_WSBEiJ_G0021512.1 mouse_genomes_project 15 89475412 89525795 - MGP_WSBEiJ_P0041212 Brd1 protein_coding protein_coding MGP_WSBEiJ_T0041213.1 MGP_WSBEiJ_G0021512.1 mouse_genomes_project 15 89476407 89521881 - MGP_WSBEiJ_P0041213 Brd1 protein_coding protein_coding MGP_WSBEiJ_T0041214.1 MGP_WSBEiJ_G0021512.1 mouse_genomes_project 15 89484140 89488961 - Brd1 protein_coding processed_transcript MGP_WSBEiJ_T0041215.1 MGP_WSBEiJ_G0021512.1 mouse_genomes_project 15 89486935 89525792 - MGP_WSBEiJ_P0041215 Brd1 protein_coding protein_coding MGP_WSBEiJ_T0041216.1 MGP_WSBEiJ_G0021512.1 mouse_genomes_project 15 89501810 89508098 - Brd1 protein_coding processed_transcript MGP_WSBEiJ_T0041217.1 MGP_WSBEiJ_G0021512.1 mouse_genomes_project 15 89502343 89505983 - Brd1 protein_coding processed_transcript MGP_WSBEiJ_T0041781.1 MGP_WSBEiJ_G0021690.1 mouse_genomes_project 15 103272364 103282921 - MGP_WSBEiJ_P0041781 Krt75 protein_coding protein_coding MGP_WSBEiJ_T0097906.1 MGP_WSBEiJ_G0036569.1 mouse_genomes_project 15 63122863 63122968 + Gm25628 snRNA snRNA MGP_WSBEiJ_T0040227.1 MGP_WSBEiJ_G0021221.1 mouse_genomes_project 15 66231952 66255525 - MGP_WSBEiJ_P0040227 St3gal1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012803.1 MGP_WSBEiJ_G0010933.1 mouse_genomes_project 15 81933020 81933644 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040195.1 MGP_WSBEiJ_G0021215.1 mouse_genomes_project 15 65640277 65677382 - MGP_WSBEiJ_P0040195 Tmem71 protein_coding protein_coding MGP_WSBEiJ_T0097896.1 MGP_WSBEiJ_G0036559.1 mouse_genomes_project 15 45317813 45317875 - Gm23665 snRNA snRNA MGP_WSBEiJ_T0039979.1 MGP_WSBEiJ_G0021134.1 mouse_genomes_project 15 39663256 40108665 + MGP_WSBEiJ_P0039979 Oxr1 protein_coding protein_coding MGP_WSBEiJ_T0039980.1 MGP_WSBEiJ_G0021134.1 mouse_genomes_project 15 40034580 40108665 + MGP_WSBEiJ_P0039980 Oxr1 protein_coding protein_coding MGP_WSBEiJ_T0039981.1 MGP_WSBEiJ_G0021134.1 mouse_genomes_project 15 40034580 40108670 + MGP_WSBEiJ_P0039981 Oxr1 protein_coding protein_coding MGP_WSBEiJ_T0039982.1 MGP_WSBEiJ_G0021134.1 mouse_genomes_project 15 40035061 40108665 + MGP_WSBEiJ_P0039982 Oxr1 protein_coding protein_coding MGP_WSBEiJ_T0039983.1 MGP_WSBEiJ_G0021134.1 mouse_genomes_project 15 40035069 40108668 + MGP_WSBEiJ_P0039983 Oxr1 protein_coding protein_coding MGP_WSBEiJ_T0039984.1 MGP_WSBEiJ_G0021134.1 mouse_genomes_project 15 40077909 40108665 + MGP_WSBEiJ_P0039984 Oxr1 protein_coding protein_coding MGP_WSBEiJ_T0096971.1 MGP_WSBEiJ_G0035652.1 mouse_genomes_project 15 79789552 79789676 + n-R5s40 rRNA rRNA MGP_WSBEiJ_T0041275.1 MGP_WSBEiJ_G0021529.1 mouse_genomes_project 15 90029366 90109929 + MGP_WSBEiJ_P0041275 Ppp6r2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041276.1 MGP_WSBEiJ_G0021529.1 mouse_genomes_project 15 90074593 90109190 + MGP_WSBEiJ_P0041276 Ppp6r2 protein_coding protein_coding MGP_WSBEiJ_T0041051.1 MGP_WSBEiJ_G0021456.1 mouse_genomes_project 15 82986241 82992331 - MGP_WSBEiJ_P0041051 Cyp2d34 protein_coding protein_coding MGP_WSBEiJ_T0039963.1 MGP_WSBEiJ_G0021126.1 mouse_genomes_project 15 37212456 37231689 - MGP_WSBEiJ_P0039963 Slc25a32 protein_coding protein_coding MGP_WSBEiJ_T0040601.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76386562 76486087 - MGP_WSBEiJ_P0040601 Arhgap39 protein_coding protein_coding MGP_WSBEiJ_T0040602.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76386562 76486000 - MGP_WSBEiJ_P0040602 Arhgap39 protein_coding protein_coding MGP_WSBEiJ_T0040603.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76387437 76388181 - Arhgap39 protein_coding retained_intron MGP_WSBEiJ_T0040604.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76395990 76486046 - Arhgap39 protein_coding retained_intron MGP_WSBEiJ_T0040605.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76414546 76460498 - MGP_WSBEiJ_P0040605 Arhgap39 protein_coding protein_coding MGP_WSBEiJ_T0040606.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76421431 76486023 - MGP_WSBEiJ_P0040606 Arhgap39 protein_coding protein_coding MGP_WSBEiJ_T0040607.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76421435 76485913 - MGP_WSBEiJ_P0040607 Arhgap39 protein_coding protein_coding MGP_WSBEiJ_T0040608.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76428397 76486058 - Arhgap39 protein_coding retained_intron MGP_WSBEiJ_T0040609.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76428846 76485887 - MGP_WSBEiJ_P0040609 Arhgap39 protein_coding protein_coding MGP_WSBEiJ_T0040610.1 MGP_WSBEiJ_G0021322.1 mouse_genomes_project 15 76428862 76485993 - MGP_WSBEiJ_P0040610 Arhgap39 protein_coding protein_coding MGP_WSBEiJ_T0040056.1 MGP_WSBEiJ_G0021167.1 mouse_genomes_project 15 53839615 53989902 + MGP_WSBEiJ_P0040056 Deptor protein_coding protein_coding MGP_WSBEiJ_T0040057.1 MGP_WSBEiJ_G0021167.1 mouse_genomes_project 15 53839722 53946919 + MGP_WSBEiJ_P0040057 Deptor protein_coding protein_coding MGP_WSBEiJ_T0040058.1 MGP_WSBEiJ_G0021167.1 mouse_genomes_project 15 53860712 53983593 + MGP_WSBEiJ_P0040058 Deptor protein_coding protein_coding MGP_WSBEiJ_T0096784.1 MGP_WSBEiJ_G0035465.1 mouse_genomes_project 15 75502435 75504825 + pseudogene pseudogene MGP_WSBEiJ_T0040341.1 MGP_WSBEiJ_G0021259.1 mouse_genomes_project 15 74634566 74636950 + protein_coding retained_intron MGP_WSBEiJ_T0040363.1 MGP_WSBEiJ_G0021266.1 mouse_genomes_project 15 75237719 75261112 - MGP_WSBEiJ_P0040363 Top1mt protein_coding protein_coding MGP_WSBEiJ_T0041637.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101063471 101096615 - MGP_WSBEiJ_P0041637 Racgap1 protein_coding protein_coding MGP_WSBEiJ_T0041638.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101063472 101096628 - MGP_WSBEiJ_P0041638 Racgap1 protein_coding protein_coding MGP_WSBEiJ_T0041639.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101069816 101077300 - Racgap1 protein_coding retained_intron MGP_WSBEiJ_T0041640.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101070096 101096561 - Racgap1 protein_coding processed_transcript MGP_WSBEiJ_T0041641.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101073041 101096554 - Racgap1 protein_coding retained_intron MGP_WSBEiJ_T0041642.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101073101 101084834 - MGP_WSBEiJ_P0041642 Racgap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041643.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101073147 101083292 - Racgap1 protein_coding retained_intron MGP_WSBEiJ_T0041644.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101076630 101096624 - MGP_WSBEiJ_P0041644 Racgap1 protein_coding protein_coding MGP_WSBEiJ_T0041645.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101076646 101079297 - Racgap1 protein_coding retained_intron MGP_WSBEiJ_T0041646.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101078815 101096541 - MGP_WSBEiJ_P0041646 Racgap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041647.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101081177 101096584 - MGP_WSBEiJ_P0041647 Racgap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041648.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101082481 101096554 - Racgap1 protein_coding retained_intron MGP_WSBEiJ_T0041649.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101082696 101096584 - MGP_WSBEiJ_P0041649 Racgap1 protein_coding protein_coding MGP_WSBEiJ_T0041650.1 MGP_WSBEiJ_G0021644.1 mouse_genomes_project 15 101084815 101096615 - MGP_WSBEiJ_P0041650 Racgap1 protein_coding protein_coding MGP_WSBEiJ_T0040635.1 MGP_WSBEiJ_G0021333.1 mouse_genomes_project 15 77088394 77096589 - MGP_WSBEiJ_P0040635 protein_coding protein_coding MGP_WSBEiJ_T0040704.1 MGP_WSBEiJ_G0021360.1 mouse_genomes_project 15 78592970 78617943 + MGP_WSBEiJ_P0040704 Cyth4 protein_coding protein_coding MGP_WSBEiJ_T0009895.1 MGP_WSBEiJ_G0008052.1 mouse_genomes_project 15 72555839 72555907 - Mir151 miRNA miRNA MGP_WSBEiJ_T0009887.1 MGP_WSBEiJ_G0008044.1 mouse_genomes_project 15 38331706 38331777 - Gm25958 miRNA miRNA MGP_WSBEiJ_T0006647.1 MGP_WSBEiJ_G0005492.1 mouse_genomes_project 15 22781155 22828947 - Gm2824 lincRNA lincRNA MGP_WSBEiJ_T0006648.1 MGP_WSBEiJ_G0005492.1 mouse_genomes_project 15 22805308 22828890 - Gm2824 lincRNA lincRNA MGP_WSBEiJ_T0040645.1 MGP_WSBEiJ_G0021340.1 mouse_genomes_project 15 77634283 77642950 + MGP_WSBEiJ_P0040645 protein_coding protein_coding MGP_WSBEiJ_T0040647.1 MGP_WSBEiJ_G0021340.1 mouse_genomes_project 15 77634329 77642950 + MGP_WSBEiJ_P0040647 protein_coding protein_coding MGP_WSBEiJ_T0011187.1 MGP_WSBEiJ_G0009344.1 mouse_genomes_project 15 57434027 57434328 + Gm23789 misc_RNA misc_RNA MGP_WSBEiJ_T0006659.1 MGP_WSBEiJ_G0005503.1 mouse_genomes_project 15 40931219 40959534 + Gm17473 lincRNA lincRNA MGP_WSBEiJ_T0099146.1 MGP_WSBEiJ_G0037809.1 mouse_genomes_project 15 29157805 29157939 - Gm26416 snoRNA snoRNA MGP_WSBEiJ_T0012808.1 MGP_WSBEiJ_G0010938.1 mouse_genomes_project 15 91459713 91460196 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039965.1 MGP_WSBEiJ_G0021128.1 mouse_genomes_project 15 37309574 37822094 + MGP_WSBEiJ_P0039965 Rims2 protein_coding protein_coding MGP_WSBEiJ_T0039966.1 MGP_WSBEiJ_G0021128.1 mouse_genomes_project 15 37309605 37821918 + MGP_WSBEiJ_P0039966 Rims2 protein_coding protein_coding MGP_WSBEiJ_T0039967.1 MGP_WSBEiJ_G0021128.1 mouse_genomes_project 15 37506306 37754558 + MGP_WSBEiJ_P0039967 Rims2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039968.1 MGP_WSBEiJ_G0021128.1 mouse_genomes_project 15 37799944 37826099 + MGP_WSBEiJ_P0039968 Rims2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012799.1 MGP_WSBEiJ_G0010929.1 mouse_genomes_project 15 78543657 78544095 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039676.1 MGP_WSBEiJ_G0021032.1 mouse_genomes_project 15 6627759 6810281 - MGP_WSBEiJ_P0039676 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039677.1 MGP_WSBEiJ_G0021032.1 mouse_genomes_project 15 6627759 6648206 - MGP_WSBEiJ_P0039677 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039678.1 MGP_WSBEiJ_G0021032.1 mouse_genomes_project 15 6627763 6810350 - MGP_WSBEiJ_P0039678 protein_coding protein_coding MGP_WSBEiJ_T0039679.1 MGP_WSBEiJ_G0021032.1 mouse_genomes_project 15 6649152 6810281 - MGP_WSBEiJ_P0039679 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039680.1 MGP_WSBEiJ_G0021032.1 mouse_genomes_project 15 6714616 6810380 - MGP_WSBEiJ_P0039680 protein_coding protein_coding MGP_WSBEiJ_T0039681.1 MGP_WSBEiJ_G0021032.1 mouse_genomes_project 15 6740100 6810332 - MGP_WSBEiJ_P0039681 protein_coding protein_coding MGP_WSBEiJ_T0039682.1 MGP_WSBEiJ_G0021032.1 mouse_genomes_project 15 6760681 6810332 - MGP_WSBEiJ_P0039682 protein_coding protein_coding MGP_WSBEiJ_T0039683.1 MGP_WSBEiJ_G0021032.1 mouse_genomes_project 15 6760684 6810289 - MGP_WSBEiJ_P0039683 protein_coding protein_coding MGP_WSBEiJ_T0040294.1 MGP_WSBEiJ_G0021239.1 mouse_genomes_project 15 74031128 74034613 - MGP_WSBEiJ_P0040294 Arc protein_coding protein_coding MGP_WSBEiJ_T0040295.1 MGP_WSBEiJ_G0021239.1 mouse_genomes_project 15 74031128 74034615 - MGP_WSBEiJ_P0040295 Arc protein_coding protein_coding MGP_WSBEiJ_T0041078.1 MGP_WSBEiJ_G0021465.1 mouse_genomes_project 15 83585590 83608817 - MGP_WSBEiJ_P0041078 Poldip3 protein_coding protein_coding MGP_WSBEiJ_T0041079.1 MGP_WSBEiJ_G0021465.1 mouse_genomes_project 15 83585590 83608870 - MGP_WSBEiJ_P0041079 Poldip3 protein_coding protein_coding MGP_WSBEiJ_T0041080.1 MGP_WSBEiJ_G0021465.1 mouse_genomes_project 15 83592729 83608787 - MGP_WSBEiJ_P0041080 Poldip3 protein_coding protein_coding MGP_WSBEiJ_T0041081.1 MGP_WSBEiJ_G0021465.1 mouse_genomes_project 15 83592824 83595471 - Poldip3 protein_coding retained_intron MGP_WSBEiJ_T0041082.1 MGP_WSBEiJ_G0021465.1 mouse_genomes_project 15 83595247 83608815 - Poldip3 protein_coding retained_intron MGP_WSBEiJ_T0041083.1 MGP_WSBEiJ_G0021465.1 mouse_genomes_project 15 83597387 83608822 - Poldip3 protein_coding retained_intron MGP_WSBEiJ_T0041585.1 MGP_WSBEiJ_G0021624.1 mouse_genomes_project 15 100332437 100335973 - MGP_WSBEiJ_P0041585 Tuba1a protein_coding protein_coding MGP_WSBEiJ_T0099168.1 MGP_WSBEiJ_G0037831.1 mouse_genomes_project 15 72657096 72657219 + Gm24787 snoRNA snoRNA MGP_WSBEiJ_T0009905.1 MGP_WSBEiJ_G0008062.1 mouse_genomes_project 15 79540581 79540658 + Gm44302 miRNA miRNA MGP_WSBEiJ_T0040039.1 MGP_WSBEiJ_G0021159.1 mouse_genomes_project 15 52956536 52987377 - MGP_WSBEiJ_P0040039 Tnfrsf11b protein_coding protein_coding MGP_WSBEiJ_T0009884.1 MGP_WSBEiJ_G0008041.1 mouse_genomes_project 15 36455128 36455239 + Mir692-1 miRNA miRNA MGP_WSBEiJ_T0040574.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76327389 76356698 + MGP_WSBEiJ_P0040574 Ppp1r16a protein_coding protein_coding MGP_WSBEiJ_T0040575.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76327421 76352589 + Ppp1r16a protein_coding processed_transcript MGP_WSBEiJ_T0040576.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76350960 76352136 + Ppp1r16a protein_coding processed_transcript MGP_WSBEiJ_T0040577.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76352186 76356698 + Ppp1r16a protein_coding retained_intron MGP_WSBEiJ_T0040578.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76352308 76356694 + MGP_WSBEiJ_P0040578 Ppp1r16a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040579.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76353212 76355128 + Ppp1r16a protein_coding retained_intron MGP_WSBEiJ_T0040580.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76353227 76355292 + MGP_WSBEiJ_P0040580 Ppp1r16a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040581.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76353470 76354272 + Ppp1r16a protein_coding retained_intron MGP_WSBEiJ_T0040582.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76354586 76356698 + Ppp1r16a protein_coding retained_intron MGP_WSBEiJ_T0040583.1 MGP_WSBEiJ_G0021316.1 mouse_genomes_project 15 76354695 76356698 + Ppp1r16a protein_coding retained_intron MGP_WSBEiJ_T0041856.1 MGP_WSBEiJ_G0021723.1 mouse_genomes_project 15 104233937 104235499 + MGP_WSBEiJ_P0041856 Prr13 protein_coding protein_coding MGP_WSBEiJ_T0041857.1 MGP_WSBEiJ_G0021723.1 mouse_genomes_project 15 104234084 104237725 + MGP_WSBEiJ_P0041857 Prr13 protein_coding protein_coding MGP_WSBEiJ_T0041858.1 MGP_WSBEiJ_G0021723.1 mouse_genomes_project 15 104234111 104237701 + MGP_WSBEiJ_P0041858 Prr13 protein_coding protein_coding MGP_WSBEiJ_T0041859.1 MGP_WSBEiJ_G0021723.1 mouse_genomes_project 15 104234141 104237703 + MGP_WSBEiJ_P0041859 Prr13 protein_coding protein_coding MGP_WSBEiJ_T0041860.1 MGP_WSBEiJ_G0021723.1 mouse_genomes_project 15 104234993 104237695 + MGP_WSBEiJ_P0041860 Prr13 protein_coding protein_coding MGP_WSBEiJ_T0041419.1 MGP_WSBEiJ_G0021566.1 mouse_genomes_project 15 95645871 95672934 + MGP_WSBEiJ_P0041419 Irak4 protein_coding protein_coding MGP_WSBEiJ_T0041420.1 MGP_WSBEiJ_G0021566.1 mouse_genomes_project 15 95645881 95661558 + Irak4 protein_coding retained_intron MGP_WSBEiJ_T0041421.1 MGP_WSBEiJ_G0021566.1 mouse_genomes_project 15 95645900 95692106 + MGP_WSBEiJ_P0041421 Irak4 protein_coding protein_coding MGP_WSBEiJ_T0041360.1 MGP_WSBEiJ_G0021550.1 mouse_genomes_project 15 91385540 91576441 - MGP_WSBEiJ_P0041360 Cpne8 protein_coding protein_coding MGP_WSBEiJ_T0041361.1 MGP_WSBEiJ_G0021550.1 mouse_genomes_project 15 91542389 91576385 - Cpne8 protein_coding retained_intron MGP_WSBEiJ_T0039927.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35545543 35982928 - MGP_WSBEiJ_P0039927 Ncald protein_coding protein_coding MGP_WSBEiJ_T0039928.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35545543 35983403 - MGP_WSBEiJ_P0039928 Ncald protein_coding protein_coding MGP_WSBEiJ_T0039929.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35545586 35643996 - MGP_WSBEiJ_P0039929 Ncald protein_coding protein_coding MGP_WSBEiJ_T0039930.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35545635 35643985 - MGP_WSBEiJ_P0039930 Ncald protein_coding protein_coding MGP_WSBEiJ_T0039931.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35547990 35643177 - MGP_WSBEiJ_P0039931 Ncald protein_coding protein_coding MGP_WSBEiJ_T0039932.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35548254 35922641 - MGP_WSBEiJ_P0039932 Ncald protein_coding protein_coding MGP_WSBEiJ_T0039933.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35551476 35982928 - MGP_WSBEiJ_P0039933 Ncald protein_coding protein_coding MGP_WSBEiJ_T0039934.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35559392 35643968 - Ncald protein_coding processed_transcript MGP_WSBEiJ_T0039935.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35581154 35983540 - MGP_WSBEiJ_P0039935 Ncald protein_coding protein_coding MGP_WSBEiJ_T0039937.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35616843 35922342 - Ncald protein_coding processed_transcript MGP_WSBEiJ_T0039938.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35806499 35922641 - Ncald protein_coding processed_transcript MGP_WSBEiJ_T0039939.1 MGP_WSBEiJ_G0021115.1 mouse_genomes_project 15 35808820 35983209 - Ncald protein_coding processed_transcript MGP_WSBEiJ_T0041798.1 MGP_WSBEiJ_G0021706.1 mouse_genomes_project 15 103810922 103834487 + MGP_WSBEiJ_P0041798 Eif4b protein_coding protein_coding MGP_WSBEiJ_T0039956.1 MGP_WSBEiJ_G0021122.1 mouse_genomes_project 15 36905409 36937062 + MGP_WSBEiJ_P0039956 Atp6v1c1 protein_coding protein_coding MGP_WSBEiJ_T0041519.1 MGP_WSBEiJ_G0021597.1 mouse_genomes_project 15 99603089 99613623 - MGP_WSBEiJ_P0041519 Zfp641 protein_coding protein_coding MGP_WSBEiJ_T0041520.1 MGP_WSBEiJ_G0021597.1 mouse_genomes_project 15 99603628 99613576 - MGP_WSBEiJ_P0041520 Zfp641 protein_coding protein_coding MGP_WSBEiJ_T0041189.1 MGP_WSBEiJ_G0021504.1 mouse_genomes_project 15 86499179 86517401 + MGP_WSBEiJ_P0041189 Gtse1 protein_coding protein_coding MGP_WSBEiJ_T0099176.1 MGP_WSBEiJ_G0037839.1 mouse_genomes_project 15 99873213 99873351 - Snora34 snoRNA snoRNA MGP_WSBEiJ_T0040697.1 MGP_WSBEiJ_G0021356.1 mouse_genomes_project 15 78468559 78483756 - MGP_WSBEiJ_P0040697 Il2rb protein_coding protein_coding MGP_WSBEiJ_T0040698.1 MGP_WSBEiJ_G0021356.1 mouse_genomes_project 15 78469331 78482461 - MGP_WSBEiJ_P0040698 Il2rb protein_coding protein_coding MGP_WSBEiJ_T0003518.1 MGP_WSBEiJ_G0003194.1 mouse_genomes_project 15 918607 921233 - Gm15632 antisense antisense MGP_WSBEiJ_T0009901.1 MGP_WSBEiJ_G0008058.1 mouse_genomes_project 15 78240540 78240602 - Mir7676-2 miRNA miRNA MGP_WSBEiJ_T0099174.1 MGP_WSBEiJ_G0037837.1 mouse_genomes_project 15 96113538 96113670 - Gm23129 snoRNA snoRNA MGP_WSBEiJ_T0012770.1 MGP_WSBEiJ_G0010900.1 mouse_genomes_project 15 25916627 25916702 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039665.1 MGP_WSBEiJ_G0021027.1 mouse_genomes_project 15 6108202 6168945 + MGP_WSBEiJ_P0039665 Lmbrd2 protein_coding protein_coding MGP_WSBEiJ_T0097886.1 MGP_WSBEiJ_G0036549.1 mouse_genomes_project 15 18753849 18753956 + Gm25101 snRNA snRNA MGP_WSBEiJ_T0039768.1 MGP_WSBEiJ_G0021056.1 mouse_genomes_project 15 10231573 10373132 - MGP_WSBEiJ_P0039768 Cdh6 protein_coding protein_coding MGP_WSBEiJ_T0041900.1 MGP_WSBEiJ_G0021731.1 mouse_genomes_project 15 104448204 104456461 - MGP_WSBEiJ_P0041900 Atp5g2 protein_coding protein_coding MGP_WSBEiJ_T0041901.1 MGP_WSBEiJ_G0021731.1 mouse_genomes_project 15 104448354 104453082 - MGP_WSBEiJ_P0041901 Atp5g2 protein_coding protein_coding MGP_WSBEiJ_T0041902.1 MGP_WSBEiJ_G0021731.1 mouse_genomes_project 15 104450079 104453076 - MGP_WSBEiJ_P0041902 Atp5g2 protein_coding protein_coding MGP_WSBEiJ_T0041903.1 MGP_WSBEiJ_G0021731.1 mouse_genomes_project 15 104451141 104457687 - MGP_WSBEiJ_P0041903 Atp5g2 protein_coding protein_coding MGP_WSBEiJ_T0040615.1 MGP_WSBEiJ_G0021326.1 mouse_genomes_project 15 76582732 76584948 + MGP_WSBEiJ_P0040615 Rpl8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0040616.1 MGP_WSBEiJ_G0021326.1 mouse_genomes_project 15 76582739 76585638 + MGP_WSBEiJ_P0040616 Rpl8 protein_coding protein_coding MGP_WSBEiJ_T0041765.1 MGP_WSBEiJ_G0021679.1 mouse_genomes_project 15 102901441 102909406 + MGP_WSBEiJ_P0041765 Nr4a1 protein_coding protein_coding MGP_WSBEiJ_T0039579.1 MGP_WSBEiJ_G0021006.1 mouse_genomes_project 15 1947604 1950132 + MGP_WSBEiJ_P0039579 Rpl37 protein_coding protein_coding MGP_WSBEiJ_T0039540.1 MGP_WSBEiJ_G0020995.1 mouse_genomes_project 15 109624 117620 + MGP_WSBEiJ_P0039540 protein_coding protein_coding MGP_WSBEiJ_T0039541.1 MGP_WSBEiJ_G0020995.1 mouse_genomes_project 15 111843 122347 + MGP_WSBEiJ_P0039541 protein_coding protein_coding MGP_WSBEiJ_T0039542.1 MGP_WSBEiJ_G0020995.1 mouse_genomes_project 15 111887 117573 + MGP_WSBEiJ_P0039542 protein_coding protein_coding MGP_WSBEiJ_T0039543.1 MGP_WSBEiJ_G0020995.1 mouse_genomes_project 15 111997 122346 + MGP_WSBEiJ_P0039543 protein_coding protein_coding MGP_WSBEiJ_T0039544.1 MGP_WSBEiJ_G0020995.1 mouse_genomes_project 15 112074 117502 + MGP_WSBEiJ_P0039544 protein_coding protein_coding MGP_WSBEiJ_T0039545.1 MGP_WSBEiJ_G0020995.1 mouse_genomes_project 15 112075 116960 + protein_coding retained_intron MGP_WSBEiJ_T0039546.1 MGP_WSBEiJ_G0020995.1 mouse_genomes_project 15 113922 119109 + MGP_WSBEiJ_P0039546 protein_coding protein_coding MGP_WSBEiJ_T0039696.1 MGP_WSBEiJ_G0021034.1 mouse_genomes_project 15 7405129 7451445 + MGP_WSBEiJ_P0039696 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040641.1 MGP_WSBEiJ_G0021336.1 mouse_genomes_project 15 77516395 77523110 - MGP_WSBEiJ_P0040641 Apol11b protein_coding protein_coding MGP_WSBEiJ_T0009921.1 MGP_WSBEiJ_G0008078.1 mouse_genomes_project 15 85524791 85524889 - Mir1249 miRNA miRNA MGP_WSBEiJ_T0040800.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79483721 79509332 - MGP_WSBEiJ_P0040800 Csnk1e protein_coding unknown_likely_coding MGP_WSBEiJ_T0040801.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79484992 79487163 - Csnk1e protein_coding retained_intron MGP_WSBEiJ_T0040802.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79488334 79509571 - MGP_WSBEiJ_P0040802 Csnk1e protein_coding protein_coding MGP_WSBEiJ_T0040803.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79489496 79490152 - Csnk1e protein_coding retained_intron MGP_WSBEiJ_T0040804.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79490018 79491412 - Csnk1e protein_coding retained_intron MGP_WSBEiJ_T0040805.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79490590 79492297 - Csnk1e protein_coding retained_intron MGP_WSBEiJ_T0040806.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79490708 79496480 - Csnk1e protein_coding retained_intron MGP_WSBEiJ_T0040807.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79492251 79506772 - MGP_WSBEiJ_P0040807 Csnk1e protein_coding protein_coding MGP_WSBEiJ_T0040808.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79492320 79509571 - MGP_WSBEiJ_P0040808 Csnk1e protein_coding protein_coding MGP_WSBEiJ_T0040809.1 MGP_WSBEiJ_G0021385.1 mouse_genomes_project 15 79496658 79511672 - MGP_WSBEiJ_P0040809 Csnk1e protein_coding protein_coding MGP_WSBEiJ_T0041445.1 MGP_WSBEiJ_G0021579.1 mouse_genomes_project 15 98248423 98286541 - MGP_WSBEiJ_P0041445 Slc38a4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000910.1 MGP_WSBEiJ_G0000848.1 mouse_genomes_project 15 62563776 62576308 + TEC TEC MGP_WSBEiJ_T0039978.1 MGP_WSBEiJ_G0021133.1 mouse_genomes_project 15 38813934 39283603 + MGP_WSBEiJ_P0039978 Zfpm2 protein_coding protein_coding MGP_WSBEiJ_T0009938.1 MGP_WSBEiJ_G0008095.1 mouse_genomes_project 15 103610320 103610431 + Gm44356 miRNA miRNA MGP_WSBEiJ_T0009896.1 MGP_WSBEiJ_G0008053.1 mouse_genomes_project 15 75667947 75668008 - Mir6952 miRNA miRNA MGP_WSBEiJ_T0039958.1 MGP_WSBEiJ_G0021124.1 mouse_genomes_project 15 37121294 37153933 + MGP_WSBEiJ_P0039958 Fzd6 protein_coding protein_coding MGP_WSBEiJ_T0039959.1 MGP_WSBEiJ_G0021124.1 mouse_genomes_project 15 37121347 37153933 + MGP_WSBEiJ_P0039959 Fzd6 protein_coding protein_coding MGP_WSBEiJ_T0041805.1 MGP_WSBEiJ_G0021709.1 mouse_genomes_project 15 103884702 103891704 + MGP_WSBEiJ_P0041805 Igfbp6 protein_coding protein_coding MGP_WSBEiJ_T0041910.1 MGP_WSBEiJ_G0021735.1 mouse_genomes_project 15 104755879 104759164 + MGP_WSBEiJ_P0041910 Hoxc11 protein_coding protein_coding MGP_WSBEiJ_T0040531.1 MGP_WSBEiJ_G0021305.1 mouse_genomes_project 15 76150363 76160314 - MGP_WSBEiJ_P0040531 Dgat1 protein_coding protein_coding MGP_WSBEiJ_T0040532.1 MGP_WSBEiJ_G0021305.1 mouse_genomes_project 15 76150365 76151529 - Dgat1 protein_coding retained_intron MGP_WSBEiJ_T0040533.1 MGP_WSBEiJ_G0021305.1 mouse_genomes_project 15 76150416 76151663 - Dgat1 protein_coding retained_intron MGP_WSBEiJ_T0040534.1 MGP_WSBEiJ_G0021305.1 mouse_genomes_project 15 76150872 76152294 - MGP_WSBEiJ_P0040534 Dgat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040535.1 MGP_WSBEiJ_G0021305.1 mouse_genomes_project 15 76151624 76154954 - MGP_WSBEiJ_P0040535 Dgat1 protein_coding protein_coding MGP_WSBEiJ_T0040536.1 MGP_WSBEiJ_G0021305.1 mouse_genomes_project 15 76151939 76152671 - Dgat1 protein_coding retained_intron MGP_WSBEiJ_T0040537.1 MGP_WSBEiJ_G0021305.1 mouse_genomes_project 15 76152250 76153544 - Dgat1 protein_coding retained_intron MGP_WSBEiJ_T0040538.1 MGP_WSBEiJ_G0021305.1 mouse_genomes_project 15 76152300 76153012 - Dgat1 protein_coding retained_intron MGP_WSBEiJ_T0041395.1 MGP_WSBEiJ_G0021560.1 mouse_genomes_project 15 94324460 94382825 - MGP_WSBEiJ_P0041395 Yaf2 protein_coding protein_coding MGP_WSBEiJ_T0041396.1 MGP_WSBEiJ_G0021560.1 mouse_genomes_project 15 94324463 94382952 - Yaf2 protein_coding processed_transcript MGP_WSBEiJ_T0039580.1 MGP_WSBEiJ_G0021007.1 mouse_genomes_project 15 1951590 1954401 - MGP_WSBEiJ_P0039580 Gm10250 protein_coding protein_coding MGP_WSBEiJ_T0040542.1 MGP_WSBEiJ_G0021308.1 mouse_genomes_project 15 76190429 76193613 + MGP_WSBEiJ_P0040542 Slc52a2 protein_coding protein_coding MGP_WSBEiJ_T0041311.1 MGP_WSBEiJ_G0021535.1 mouse_genomes_project 15 90201143 90203327 - MGP_WSBEiJ_P0041311 Sco2 protein_coding protein_coding MGP_WSBEiJ_T0040750.1 MGP_WSBEiJ_G0021375.1 mouse_genomes_project 15 79155368 79183356 + MGP_WSBEiJ_P0040750 Micall1 protein_coding protein_coding MGP_WSBEiJ_T0096974.1 MGP_WSBEiJ_G0035655.1 mouse_genomes_project 15 92496092 92496205 - Gm24647 rRNA rRNA MGP_WSBEiJ_T0041525.1 MGP_WSBEiJ_G0021601.1 mouse_genomes_project 15 99745336 99760072 + MGP_WSBEiJ_P0041525 1700031M16Rik protein_coding protein_coding MGP_WSBEiJ_T0041526.1 MGP_WSBEiJ_G0021601.1 mouse_genomes_project 15 99745343 99762776 + MGP_WSBEiJ_P0041526 1700031M16Rik protein_coding protein_coding MGP_WSBEiJ_T0041527.1 MGP_WSBEiJ_G0021601.1 mouse_genomes_project 15 99745362 99759273 + 1700031M16Rik protein_coding processed_transcript MGP_WSBEiJ_T0041528.1 MGP_WSBEiJ_G0021601.1 mouse_genomes_project 15 99745362 99761896 + 1700031M16Rik protein_coding processed_transcript MGP_WSBEiJ_T0041529.1 MGP_WSBEiJ_G0021601.1 mouse_genomes_project 15 99745362 99761896 + 1700031M16Rik protein_coding processed_transcript MGP_WSBEiJ_T0041530.1 MGP_WSBEiJ_G0021601.1 mouse_genomes_project 15 99745362 99762647 + MGP_WSBEiJ_P0041530 1700031M16Rik protein_coding protein_coding MGP_WSBEiJ_T0041531.1 MGP_WSBEiJ_G0021601.1 mouse_genomes_project 15 99745362 99762780 + MGP_WSBEiJ_P0041531 1700031M16Rik protein_coding protein_coding MGP_WSBEiJ_T0039839.1 MGP_WSBEiJ_G0021083.1 mouse_genomes_project 15 29592732 29611889 + Fam173b protein_coding processed_transcript MGP_WSBEiJ_T0039840.1 MGP_WSBEiJ_G0021083.1 mouse_genomes_project 15 29592998 29608197 + MGP_WSBEiJ_P0039840 Fam173b protein_coding protein_coding MGP_WSBEiJ_T0039841.1 MGP_WSBEiJ_G0021083.1 mouse_genomes_project 15 29592998 29609271 + MGP_WSBEiJ_P0039841 Fam173b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040127.1 MGP_WSBEiJ_G0021195.1 mouse_genomes_project 15 58219599 58236530 + Sqle protein_coding retained_intron MGP_WSBEiJ_T0040128.1 MGP_WSBEiJ_G0021195.1 mouse_genomes_project 15 58219603 58238771 + MGP_WSBEiJ_P0040128 Sqle protein_coding protein_coding MGP_WSBEiJ_T0040129.1 MGP_WSBEiJ_G0021195.1 mouse_genomes_project 15 58219629 58238771 + MGP_WSBEiJ_P0040129 Sqle protein_coding protein_coding MGP_WSBEiJ_T0040130.1 MGP_WSBEiJ_G0021195.1 mouse_genomes_project 15 58232186 58234771 + Sqle protein_coding retained_intron MGP_WSBEiJ_T0040000.1 MGP_WSBEiJ_G0021145.1 mouse_genomes_project 15 42907086 42928549 + MGP_WSBEiJ_P0040000 Ebag9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0006665.1 MGP_WSBEiJ_G0005507.1 mouse_genomes_project 15 44994385 45014320 + 4930548G14Rik lincRNA lincRNA MGP_WSBEiJ_T0006666.1 MGP_WSBEiJ_G0005507.1 mouse_genomes_project 15 44996532 44996850 + 4930548G14Rik lincRNA lincRNA MGP_WSBEiJ_T0040642.1 MGP_WSBEiJ_G0021337.1 mouse_genomes_project 15 77548346 77551481 - MGP_WSBEiJ_P0040642 Apol10a protein_coding protein_coding MGP_WSBEiJ_T0006716.1 MGP_WSBEiJ_G0005538.1 mouse_genomes_project 15 104745701 104749366 - Hotair lincRNA lincRNA MGP_WSBEiJ_T0039902.1 MGP_WSBEiJ_G0021107.1 mouse_genomes_project 15 34364288 34411405 - MGP_WSBEiJ_P0039902 Rnf19a protein_coding protein_coding MGP_WSBEiJ_T0039760.1 MGP_WSBEiJ_G0021055.1 mouse_genomes_project 15 10020142 10130415 + MGP_WSBEiJ_P0039760 Drosha protein_coding protein_coding MGP_WSBEiJ_T0039761.1 MGP_WSBEiJ_G0021055.1 mouse_genomes_project 15 10020190 10130368 + MGP_WSBEiJ_P0039761 Drosha protein_coding protein_coding MGP_WSBEiJ_T0039762.1 MGP_WSBEiJ_G0021055.1 mouse_genomes_project 15 10020217 10028343 + Drosha protein_coding processed_transcript MGP_WSBEiJ_T0039763.1 MGP_WSBEiJ_G0021055.1 mouse_genomes_project 15 10020217 10028343 + Drosha protein_coding processed_transcript MGP_WSBEiJ_T0039764.1 MGP_WSBEiJ_G0021055.1 mouse_genomes_project 15 10021454 10028261 + Drosha protein_coding processed_transcript MGP_WSBEiJ_T0039765.1 MGP_WSBEiJ_G0021055.1 mouse_genomes_project 15 10027550 10130247 + MGP_WSBEiJ_P0039765 Drosha protein_coding protein_coding MGP_WSBEiJ_T0039766.1 MGP_WSBEiJ_G0021055.1 mouse_genomes_project 15 10031074 10098229 + Drosha protein_coding retained_intron MGP_WSBEiJ_T0039767.1 MGP_WSBEiJ_G0021055.1 mouse_genomes_project 15 10073090 10079617 + Drosha protein_coding processed_transcript MGP_WSBEiJ_T0041943.1 MGP_WSBEiJ_G0021749.1 mouse_genomes_project 15 105169871 105192294 - MGP_WSBEiJ_P0041943 Itga5 protein_coding protein_coding MGP_WSBEiJ_T0040029.1 MGP_WSBEiJ_G0021155.1 mouse_genomes_project 15 51379016 51399137 + MGP_WSBEiJ_P0040029 Med30 protein_coding protein_coding MGP_WSBEiJ_T0040022.1 MGP_WSBEiJ_G0021151.1 mouse_genomes_project 15 50511186 50520228 + MGP_WSBEiJ_P0040022 Utp23 protein_coding protein_coding MGP_WSBEiJ_T0040023.1 MGP_WSBEiJ_G0021151.1 mouse_genomes_project 15 50511235 50517380 + MGP_WSBEiJ_P0040023 Utp23 protein_coding protein_coding MGP_WSBEiJ_T0040024.1 MGP_WSBEiJ_G0021151.1 mouse_genomes_project 15 50511262 50517375 + MGP_WSBEiJ_P0040024 Utp23 protein_coding protein_coding MGP_WSBEiJ_T0040025.1 MGP_WSBEiJ_G0021151.1 mouse_genomes_project 15 50511499 50517374 + MGP_WSBEiJ_P0040025 Utp23 protein_coding protein_coding MGP_WSBEiJ_T0012778.1 MGP_WSBEiJ_G0010908.1 mouse_genomes_project 15 37293044 37293975 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0039996.1 MGP_WSBEiJ_G0021143.1 mouse_genomes_project 15 42706894 42716456 + MGP_WSBEiJ_P0039996 Eny2 protein_coding protein_coding MGP_WSBEiJ_T0039749.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9535244 9772484 - MGP_WSBEiJ_P0039749 Pdzd2 protein_coding protein_coding MGP_WSBEiJ_T0039750.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9578512 9581271 - Pdzd2 protein_coding retained_intron MGP_WSBEiJ_T0039751.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9585004 9592377 - Pdzd2 protein_coding retained_intron MGP_WSBEiJ_T0039752.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9587355 9730554 - MGP_WSBEiJ_P0039752 Pdzd2 protein_coding protein_coding MGP_WSBEiJ_T0039753.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9641913 9677420 - MGP_WSBEiJ_P0039753 Pdzd2 protein_coding protein_coding MGP_WSBEiJ_T0039754.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9641953 9731153 - MGP_WSBEiJ_P0039754 Pdzd2 protein_coding protein_coding MGP_WSBEiJ_T0039755.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9708337 9731061 - Pdzd2 protein_coding processed_transcript MGP_WSBEiJ_T0039756.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9726221 9730557 - Pdzd2 protein_coding retained_intron MGP_WSBEiJ_T0039757.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9730338 9731508 - Pdzd2 protein_coding retained_intron MGP_WSBEiJ_T0039758.1 MGP_WSBEiJ_G0021053.1 mouse_genomes_project 15 9768441 9782057 - Pdzd2 protein_coding processed_transcript MGP_WSBEiJ_T0041563.1 MGP_WSBEiJ_G0021614.1 mouse_genomes_project 15 100108844 100113090 - MGP_WSBEiJ_P0041563 Fkbp11 protein_coding protein_coding MGP_WSBEiJ_T0097922.1 MGP_WSBEiJ_G0036585.1 mouse_genomes_project 15 89829866 89830025 + Gm23737 snRNA snRNA MGP_WSBEiJ_T0039759.1 MGP_WSBEiJ_G0021054.1 mouse_genomes_project 15 10003473 10019985 - MGP_WSBEiJ_P0039759 6030458C11Rik protein_coding protein_coding MGP_WSBEiJ_T0009872.1 MGP_WSBEiJ_G0008029.1 mouse_genomes_project 15 10035799 10035939 + miRNA miRNA MGP_WSBEiJ_T0040421.1 MGP_WSBEiJ_G0021284.1 mouse_genomes_project 15 75673303 75684063 - MGP_WSBEiJ_P0040421 Puf60 protein_coding protein_coding MGP_WSBEiJ_T0040422.1 MGP_WSBEiJ_G0021284.1 mouse_genomes_project 15 75673303 75684063 - MGP_WSBEiJ_P0040422 Puf60 protein_coding protein_coding MGP_WSBEiJ_T0040042.1 MGP_WSBEiJ_G0021162.1 mouse_genomes_project 15 53460343 53469562 + MGP_WSBEiJ_P0040042 Nov protein_coding protein_coding MGP_WSBEiJ_T0006681.1 MGP_WSBEiJ_G0005513.1 mouse_genomes_project 15 76769863 76781727 + 1700109K24Rik lincRNA lincRNA MGP_WSBEiJ_T0040415.1 MGP_WSBEiJ_G0021283.1 mouse_genomes_project 15 75650279 75672874 - MGP_WSBEiJ_P0040415 Scrib protein_coding protein_coding MGP_WSBEiJ_T0040416.1 MGP_WSBEiJ_G0021283.1 mouse_genomes_project 15 75650279 75672874 - MGP_WSBEiJ_P0040416 Scrib protein_coding protein_coding MGP_WSBEiJ_T0040417.1 MGP_WSBEiJ_G0021283.1 mouse_genomes_project 15 75650279 75672904 - MGP_WSBEiJ_P0040417 Scrib protein_coding protein_coding MGP_WSBEiJ_T0040418.1 MGP_WSBEiJ_G0021283.1 mouse_genomes_project 15 75650279 75665839 - MGP_WSBEiJ_P0040418 Scrib protein_coding protein_coding MGP_WSBEiJ_T0040419.1 MGP_WSBEiJ_G0021283.1 mouse_genomes_project 15 75652061 75653908 - MGP_WSBEiJ_P0040419 Scrib protein_coding protein_coding MGP_WSBEiJ_T0040420.1 MGP_WSBEiJ_G0021283.1 mouse_genomes_project 15 75652324 75653908 - MGP_WSBEiJ_P0040420 Scrib protein_coding protein_coding MGP_WSBEiJ_T0040319.1 MGP_WSBEiJ_G0021253.1 mouse_genomes_project 15 74240701 74250275 - MGP_WSBEiJ_P0040319 protein_coding protein_coding MGP_WSBEiJ_T0006680.1 MGP_WSBEiJ_G0005512.1 mouse_genomes_project 15 74498208 74501458 - Gm28502 lincRNA lincRNA MGP_WSBEiJ_T0009915.1 MGP_WSBEiJ_G0008072.1 mouse_genomes_project 15 82984104 82984164 - Gm27742 miRNA miRNA MGP_WSBEiJ_T0041060.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83543126 83558426 + Serhl protein_coding processed_transcript MGP_WSBEiJ_T0041061.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83546514 83558656 + MGP_WSBEiJ_P0041061 Serhl protein_coding protein_coding MGP_WSBEiJ_T0041062.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83553467 83559664 + Serhl protein_coding processed_transcript MGP_WSBEiJ_T0041063.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83556901 83559700 + Serhl protein_coding retained_intron MGP_WSBEiJ_T0041064.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83556927 83559725 + Serhl protein_coding retained_intron MGP_WSBEiJ_T0041065.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83556932 83575697 + MGP_WSBEiJ_P0041065 Serhl protein_coding protein_coding MGP_WSBEiJ_T0041066.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83556932 83559282 + MGP_WSBEiJ_P0041066 Serhl protein_coding protein_coding MGP_WSBEiJ_T0041067.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83556982 83575536 + MGP_WSBEiJ_P0041067 Serhl protein_coding protein_coding MGP_WSBEiJ_T0041068.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83558223 83559860 + Serhl protein_coding retained_intron MGP_WSBEiJ_T0041069.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83560351 83575236 + Serhl protein_coding retained_intron MGP_WSBEiJ_T0041070.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83560573 83564997 + Serhl protein_coding retained_intron MGP_WSBEiJ_T0041071.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83560575 83562447 + Serhl protein_coding retained_intron MGP_WSBEiJ_T0041072.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83561015 83573982 + MGP_WSBEiJ_P0041072 Serhl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041073.1 MGP_WSBEiJ_G0021463.1 mouse_genomes_project 15 83563227 83576125 + Serhl protein_coding processed_transcript MGP_WSBEiJ_T0041359.1 MGP_WSBEiJ_G0021549.1 mouse_genomes_project 15 91118192 91124318 + MGP_WSBEiJ_P0041359 Alg10b protein_coding protein_coding MGP_WSBEiJ_T0000904.1 MGP_WSBEiJ_G0000842.1 mouse_genomes_project 15 5629973 5632941 - TEC TEC MGP_WSBEiJ_T0040310.1 MGP_WSBEiJ_G0021249.1 mouse_genomes_project 15 74163340 74166456 - MGP_WSBEiJ_P0040310 Ly6k protein_coding protein_coding MGP_WSBEiJ_T0040311.1 MGP_WSBEiJ_G0021249.1 mouse_genomes_project 15 74163340 74166003 - MGP_WSBEiJ_P0040311 Ly6k protein_coding protein_coding MGP_WSBEiJ_T0041369.1 MGP_WSBEiJ_G0021553.1 mouse_genomes_project 15 92117510 92183664 + MGP_WSBEiJ_P0041369 CN725425 protein_coding protein_coding MGP_WSBEiJ_T0041370.1 MGP_WSBEiJ_G0021553.1 mouse_genomes_project 15 92117592 92183664 + MGP_WSBEiJ_P0041370 CN725425 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041371.1 MGP_WSBEiJ_G0021553.1 mouse_genomes_project 15 92150573 92183655 + MGP_WSBEiJ_P0041371 CN725425 protein_coding protein_coding MGP_WSBEiJ_T0097902.1 MGP_WSBEiJ_G0036565.1 mouse_genomes_project 15 56980454 56980516 - Gm23475 snRNA snRNA MGP_WSBEiJ_T0040301.1 MGP_WSBEiJ_G0021244.1 mouse_genomes_project 15 74095944 74098001 - MGP_WSBEiJ_P0040301 Lypd2 protein_coding protein_coding MGP_WSBEiJ_T0040302.1 MGP_WSBEiJ_G0021244.1 mouse_genomes_project 15 74096504 74097989 - Lypd2 protein_coding retained_intron MGP_WSBEiJ_T0009874.1 MGP_WSBEiJ_G0008031.1 mouse_genomes_project 15 19614343 19614512 - Gm44373 miRNA miRNA MGP_WSBEiJ_T0040999.1 MGP_WSBEiJ_G0021437.1 mouse_genomes_project 15 82232889 82244758 - MGP_WSBEiJ_P0040999 Pmm1 protein_coding protein_coding MGP_WSBEiJ_T0041000.1 MGP_WSBEiJ_G0021437.1 mouse_genomes_project 15 82232889 82244697 - MGP_WSBEiJ_P0041000 Pmm1 protein_coding protein_coding MGP_WSBEiJ_T0041001.1 MGP_WSBEiJ_G0021437.1 mouse_genomes_project 15 82233183 82237318 - Pmm1 protein_coding retained_intron MGP_WSBEiJ_T0041002.1 MGP_WSBEiJ_G0021437.1 mouse_genomes_project 15 82233225 82244670 - MGP_WSBEiJ_P0041002 Pmm1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041003.1 MGP_WSBEiJ_G0021437.1 mouse_genomes_project 15 82233328 82234046 - Pmm1 protein_coding retained_intron MGP_WSBEiJ_T0041004.1 MGP_WSBEiJ_G0021437.1 mouse_genomes_project 15 82239380 82244661 - Pmm1 protein_coding retained_intron MGP_WSBEiJ_T0041005.1 MGP_WSBEiJ_G0021437.1 mouse_genomes_project 15 82241168 82244592 - Pmm1 protein_coding retained_intron MGP_WSBEiJ_T0011199.1 MGP_WSBEiJ_G0009356.1 mouse_genomes_project 15 104746996 104747065 + Gm27337 misc_RNA misc_RNA MGP_WSBEiJ_T0012766.1 MGP_WSBEiJ_G0010896.1 mouse_genomes_project 15 10665102 10666714 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097898.1 MGP_WSBEiJ_G0036561.1 mouse_genomes_project 15 47383148 47383233 - Gm23185 snRNA snRNA MGP_WSBEiJ_T0040171.1 MGP_WSBEiJ_G0021208.1 mouse_genomes_project 15 63934643 64055588 + MGP_WSBEiJ_P0040171 Gm21798 protein_coding protein_coding MGP_WSBEiJ_T0009882.1 MGP_WSBEiJ_G0008039.1 mouse_genomes_project 15 34961897 34961971 - Gm25303 miRNA miRNA MGP_WSBEiJ_T0041290.1 MGP_WSBEiJ_G0021531.1 mouse_genomes_project 15 90148611 90150368 + MGP_WSBEiJ_P0041290 Adm2 protein_coding protein_coding MGP_WSBEiJ_T0041170.1 MGP_WSBEiJ_G0021498.1 mouse_genomes_project 15 86103214 86113601 - MGP_WSBEiJ_P0041170 7530416G11Rik protein_coding protein_coding MGP_WSBEiJ_T0040308.1 MGP_WSBEiJ_G0021248.1 mouse_genomes_project 15 74135010 74142927 - MGP_WSBEiJ_P0040308 D730001G18Rik protein_coding protein_coding MGP_WSBEiJ_T0040309.1 MGP_WSBEiJ_G0021248.1 mouse_genomes_project 15 74135011 74142962 - MGP_WSBEiJ_P0040309 D730001G18Rik protein_coding protein_coding MGP_WSBEiJ_T0097910.1 MGP_WSBEiJ_G0036573.1 mouse_genomes_project 15 73061058 73061185 + Gm22106 snRNA snRNA MGP_WSBEiJ_T0003520.1 MGP_WSBEiJ_G0003196.1 mouse_genomes_project 15 3166558 3173232 - Gm16311 antisense antisense MGP_WSBEiJ_T0039870.1 MGP_WSBEiJ_G0021095.1 mouse_genomes_project 15 32560470 32573316 - MGP_WSBEiJ_P0039870 Rida protein_coding protein_coding MGP_WSBEiJ_T0039871.1 MGP_WSBEiJ_G0021095.1 mouse_genomes_project 15 32560473 32566543 - Rida protein_coding retained_intron MGP_WSBEiJ_T0039872.1 MGP_WSBEiJ_G0021095.1 mouse_genomes_project 15 32561343 32573232 - Rida protein_coding retained_intron MGP_WSBEiJ_T0039873.1 MGP_WSBEiJ_G0021095.1 mouse_genomes_project 15 32562053 32566429 - Rida protein_coding processed_transcript MGP_WSBEiJ_T0040049.1 MGP_WSBEiJ_G0021165.1 mouse_genomes_project 15 53800961 53815352 - MGP_WSBEiJ_P0040049 Dscc1 protein_coding protein_coding MGP_WSBEiJ_T0040050.1 MGP_WSBEiJ_G0021165.1 mouse_genomes_project 15 53800964 53815341 - MGP_WSBEiJ_P0040050 Dscc1 protein_coding protein_coding MGP_WSBEiJ_T0040051.1 MGP_WSBEiJ_G0021165.1 mouse_genomes_project 15 53808581 53812624 - Dscc1 protein_coding retained_intron MGP_WSBEiJ_T0040882.1 MGP_WSBEiJ_G0021407.1 mouse_genomes_project 15 80381719 80397408 + MGP_WSBEiJ_P0040882 Mief1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0040650.1 MGP_WSBEiJ_G0021343.1 mouse_genomes_project 15 77677140 77759764 - MGP_WSBEiJ_P0040650 protein_coding protein_coding MGP_WSBEiJ_T0040651.1 MGP_WSBEiJ_G0021343.1 mouse_genomes_project 15 77681880 77683778 - protein_coding retained_intron MGP_WSBEiJ_T0040652.1 MGP_WSBEiJ_G0021343.1 mouse_genomes_project 15 77704758 77759645 - protein_coding retained_intron MGP_WSBEiJ_T0040653.1 MGP_WSBEiJ_G0021343.1 mouse_genomes_project 15 77706790 77759694 - protein_coding retained_intron MGP_WSBEiJ_T0040654.1 MGP_WSBEiJ_G0021343.1 mouse_genomes_project 15 77707306 77759636 - MGP_WSBEiJ_P0040654 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040655.1 MGP_WSBEiJ_G0021343.1 mouse_genomes_project 15 77711215 77729783 - protein_coding processed_transcript MGP_WSBEiJ_T0040656.1 MGP_WSBEiJ_G0021343.1 mouse_genomes_project 15 77722115 77759694 - protein_coding retained_intron MGP_WSBEiJ_T0041444.1 MGP_WSBEiJ_G0021578.1 mouse_genomes_project 15 98004274 98004655 - MGP_WSBEiJ_P0041444 Gm8888 protein_coding protein_coding MGP_WSBEiJ_T0003545.1 MGP_WSBEiJ_G0003214.1 mouse_genomes_project 15 79493090 79498236 + Gm16059 antisense antisense MGP_WSBEiJ_T0097921.1 MGP_WSBEiJ_G0036584.1 mouse_genomes_project 15 89637241 89637348 + Gm23144 snRNA snRNA MGP_WSBEiJ_T0041518.1 MGP_WSBEiJ_G0021596.1 mouse_genomes_project 15 99568890 99570216 - MGP_WSBEiJ_P0041518 H1fnt protein_coding protein_coding MGP_WSBEiJ_T0040094.1 MGP_WSBEiJ_G0021178.1 mouse_genomes_project 15 56853443 56865955 - MGP_WSBEiJ_P0040094 9130401M01Rik protein_coding protein_coding MGP_WSBEiJ_T0040095.1 MGP_WSBEiJ_G0021178.1 mouse_genomes_project 15 56853454 56859521 - 9130401M01Rik protein_coding processed_transcript MGP_WSBEiJ_T0040097.1 MGP_WSBEiJ_G0021178.1 mouse_genomes_project 15 56860437 56865830 - MGP_WSBEiJ_P0040097 9130401M01Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040098.1 MGP_WSBEiJ_G0021178.1 mouse_genomes_project 15 56862579 56865965 - MGP_WSBEiJ_P0040098 9130401M01Rik protein_coding protein_coding MGP_WSBEiJ_T0006655.1 MGP_WSBEiJ_G0005499.1 mouse_genomes_project 15 36783933 36835941 - 2310043O21Rik lincRNA lincRNA MGP_WSBEiJ_T0003526.1 MGP_WSBEiJ_G0003200.1 mouse_genomes_project 15 37923275 37943475 + Gm16291 antisense antisense MGP_WSBEiJ_T0100588.1 MGP_WSBEiJ_G0039046.1 mouse_genomes_project 15 74888656 74892566 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0041953.1 MGP_WSBEiJ_G0021751.1 mouse_genomes_project 15 105259389 105268884 - MGP_WSBEiJ_P0041953 BC048502 protein_coding protein_coding MGP_WSBEiJ_T0040428.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782918 75812748 - MGP_WSBEiJ_P0040428 Plec protein_coding protein_coding MGP_WSBEiJ_T0040429.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782923 75819407 - MGP_WSBEiJ_P0040429 Plec protein_coding protein_coding MGP_WSBEiJ_T0040430.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782923 75822251 - MGP_WSBEiJ_P0040430 Plec protein_coding protein_coding MGP_WSBEiJ_T0040431.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782923 75845008 - MGP_WSBEiJ_P0040431 Plec protein_coding protein_coding MGP_WSBEiJ_T0040432.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782923 75821339 - MGP_WSBEiJ_P0040432 Plec protein_coding protein_coding MGP_WSBEiJ_T0040433.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782923 75812923 - MGP_WSBEiJ_P0040433 Plec protein_coding protein_coding MGP_WSBEiJ_T0040434.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782924 75843125 - MGP_WSBEiJ_P0040434 Plec protein_coding protein_coding MGP_WSBEiJ_T0040435.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782925 75819408 - MGP_WSBEiJ_P0040435 Plec protein_coding protein_coding MGP_WSBEiJ_T0040436.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782925 75811297 - MGP_WSBEiJ_P0040436 Plec protein_coding protein_coding MGP_WSBEiJ_T0040437.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782925 75808798 - MGP_WSBEiJ_P0040437 Plec protein_coding protein_coding MGP_WSBEiJ_T0040438.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782925 75812923 - MGP_WSBEiJ_P0040438 Plec protein_coding protein_coding MGP_WSBEiJ_T0040439.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75782925 75813695 - MGP_WSBEiJ_P0040439 Plec protein_coding protein_coding MGP_WSBEiJ_T0040440.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75787331 75801131 - MGP_WSBEiJ_P0040440 Plec protein_coding protein_coding MGP_WSBEiJ_T0040441.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75799699 75819407 - MGP_WSBEiJ_P0040441 Plec protein_coding protein_coding MGP_WSBEiJ_T0040442.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75801551 75821339 - MGP_WSBEiJ_P0040442 Plec protein_coding protein_coding MGP_WSBEiJ_T0040443.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75801551 75845675 - MGP_WSBEiJ_P0040443 Plec protein_coding protein_coding MGP_WSBEiJ_T0040444.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75801551 75812923 - MGP_WSBEiJ_P0040444 Plec protein_coding protein_coding MGP_WSBEiJ_T0040445.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75801628 75846200 - MGP_WSBEiJ_P0040445 Plec protein_coding protein_coding MGP_WSBEiJ_T0040446.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75807480 75813695 - MGP_WSBEiJ_P0040446 Plec protein_coding protein_coding MGP_WSBEiJ_T0040447.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75807480 75822251 - MGP_WSBEiJ_P0040447 Plec protein_coding protein_coding MGP_WSBEiJ_T0040448.1 MGP_WSBEiJ_G0021287.1 mouse_genomes_project 15 75844364 75846204 - Plec protein_coding retained_intron MGP_WSBEiJ_T0040529.1 MGP_WSBEiJ_G0021304.1 mouse_genomes_project 15 76121941 76149321 + MGP_WSBEiJ_P0040529 Hsf1 protein_coding protein_coding MGP_WSBEiJ_T0040530.1 MGP_WSBEiJ_G0021304.1 mouse_genomes_project 15 76122097 76150266 + MGP_WSBEiJ_P0040530 Hsf1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012769.1 MGP_WSBEiJ_G0010899.1 mouse_genomes_project 15 23487693 23488021 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041784.1 MGP_WSBEiJ_G0021693.1 mouse_genomes_project 15 103454443 103463599 - MGP_WSBEiJ_P0041784 Krt71 protein_coding protein_coding MGP_WSBEiJ_T0041405.1 MGP_WSBEiJ_G0021562.1 mouse_genomes_project 15 94441857 94543442 + MGP_WSBEiJ_P0041405 Pphln1 protein_coding protein_coding MGP_WSBEiJ_T0041406.1 MGP_WSBEiJ_G0021562.1 mouse_genomes_project 15 94441857 94543442 + MGP_WSBEiJ_P0041406 Pphln1 protein_coding protein_coding MGP_WSBEiJ_T0041407.1 MGP_WSBEiJ_G0021562.1 mouse_genomes_project 15 94441857 94543442 + MGP_WSBEiJ_P0041407 Pphln1 protein_coding protein_coding MGP_WSBEiJ_T0041408.1 MGP_WSBEiJ_G0021562.1 mouse_genomes_project 15 94441971 94543027 + MGP_WSBEiJ_P0041408 Pphln1 protein_coding protein_coding MGP_WSBEiJ_T0041218.1 MGP_WSBEiJ_G0021513.1 mouse_genomes_project 15 89543301 89564831 + protein_coding processed_transcript MGP_WSBEiJ_T0040109.1 MGP_WSBEiJ_G0021182.1 mouse_genomes_project 15 56978682 56996972 + MGP_WSBEiJ_P0040109 Wdyhv1 protein_coding protein_coding MGP_WSBEiJ_T0039888.1 MGP_WSBEiJ_G0021102.1 mouse_genomes_project 15 34046928 34056367 - MGP_WSBEiJ_P0039888 Cox6c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039889.1 MGP_WSBEiJ_G0021102.1 mouse_genomes_project 15 34053012 34059282 - MGP_WSBEiJ_P0039889 Cox6c protein_coding protein_coding MGP_WSBEiJ_T0039890.1 MGP_WSBEiJ_G0021102.1 mouse_genomes_project 15 34053016 34058681 - MGP_WSBEiJ_P0039890 Cox6c protein_coding protein_coding MGP_WSBEiJ_T0039891.1 MGP_WSBEiJ_G0021102.1 mouse_genomes_project 15 34053019 34059243 - Cox6c protein_coding retained_intron MGP_WSBEiJ_T0039892.1 MGP_WSBEiJ_G0021102.1 mouse_genomes_project 15 34056422 34059045 - MGP_WSBEiJ_P0039892 Cox6c protein_coding protein_coding MGP_WSBEiJ_T0003567.1 MGP_WSBEiJ_G0003233.1 mouse_genomes_project 15 102167351 102169204 + Gm27209 antisense antisense MGP_WSBEiJ_T0009871.1 MGP_WSBEiJ_G0008028.1 mouse_genomes_project 15 9328381 9328464 + Mir1898 miRNA miRNA MGP_WSBEiJ_T0040820.1 MGP_WSBEiJ_G0021392.1 mouse_genomes_project 15 79766998 79768927 + MGP_WSBEiJ_P0040820 Tomm22 protein_coding protein_coding MGP_WSBEiJ_T0040821.1 MGP_WSBEiJ_G0021392.1 mouse_genomes_project 15 79767228 79768744 + Tomm22 protein_coding processed_transcript MGP_WSBEiJ_T0040303.1 MGP_WSBEiJ_G0021245.1 mouse_genomes_project 15 74107727 74111657 - MGP_WSBEiJ_P0040303 Slurp2 protein_coding protein_coding MGP_WSBEiJ_T0040482.1 MGP_WSBEiJ_G0021295.1 mouse_genomes_project 15 75975992 75978404 + MGP_WSBEiJ_P0040482 Cyc1 protein_coding protein_coding MGP_WSBEiJ_T0003528.1 MGP_WSBEiJ_G0003202.1 mouse_genomes_project 15 56510971 56511786 - Gm16006 antisense antisense MGP_WSBEiJ_T0041095.1 MGP_WSBEiJ_G0021471.1 mouse_genomes_project 15 84016249 84034308 + MGP_WSBEiJ_P0041095 Bik protein_coding protein_coding MGP_WSBEiJ_T0039684.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7247778 7409138 + protein_coding retained_intron MGP_WSBEiJ_T0039685.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7247954 7428030 + protein_coding processed_transcript MGP_WSBEiJ_T0039686.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7248186 7428300 + MGP_WSBEiJ_P0039686 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039687.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7248195 7416757 + MGP_WSBEiJ_P0039687 protein_coding protein_coding MGP_WSBEiJ_T0039688.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7248321 7399873 + protein_coding retained_intron MGP_WSBEiJ_T0039689.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7284300 7399161 + protein_coding processed_transcript MGP_WSBEiJ_T0039690.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7286806 7399227 + MGP_WSBEiJ_P0039690 protein_coding protein_coding MGP_WSBEiJ_T0039691.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7294799 7421732 + MGP_WSBEiJ_P0039691 protein_coding protein_coding MGP_WSBEiJ_T0039692.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7294799 7425530 + MGP_WSBEiJ_P0039692 protein_coding protein_coding MGP_WSBEiJ_T0039693.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7294799 7428930 + MGP_WSBEiJ_P0039693 protein_coding protein_coding MGP_WSBEiJ_T0039694.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7322741 7402375 + MGP_WSBEiJ_P0039694 protein_coding protein_coding MGP_WSBEiJ_T0039695.1 MGP_WSBEiJ_G0021033.1 mouse_genomes_project 15 7393962 7402357 + MGP_WSBEiJ_P0039695 protein_coding protein_coding MGP_WSBEiJ_T0041052.1 MGP_WSBEiJ_G0021457.1 mouse_genomes_project 15 83007608 83012636 - MGP_WSBEiJ_P0041052 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0009877.1 MGP_WSBEiJ_G0008034.1 mouse_genomes_project 15 27643145 27643219 - Mir3964 miRNA miRNA MGP_WSBEiJ_T0097289.1 MGP_WSBEiJ_G0035966.1 mouse_genomes_project 15 35415664 35416424 + Gm16137 sense_intronic sense_intronic MGP_WSBEiJ_T0040393.1 MGP_WSBEiJ_G0021274.1 mouse_genomes_project 15 75502410 75507192 + MGP_WSBEiJ_P0040393 Tigd5 protein_coding protein_coding MGP_WSBEiJ_T0039561.1 MGP_WSBEiJ_G0020999.1 mouse_genomes_project 15 827950 842609 - MGP_WSBEiJ_P0039561 AW549877 protein_coding protein_coding MGP_WSBEiJ_T0041179.1 MGP_WSBEiJ_G0021501.1 mouse_genomes_project 15 86439160 86444592 - MGP_WSBEiJ_P0041179 Cdpf1 protein_coding protein_coding MGP_WSBEiJ_T0041180.1 MGP_WSBEiJ_G0021501.1 mouse_genomes_project 15 86439388 86444550 - MGP_WSBEiJ_P0041180 Cdpf1 protein_coding protein_coding MGP_WSBEiJ_T0041181.1 MGP_WSBEiJ_G0021501.1 mouse_genomes_project 15 86439432 86444540 - MGP_WSBEiJ_P0041181 Cdpf1 protein_coding protein_coding MGP_WSBEiJ_T0041182.1 MGP_WSBEiJ_G0021501.1 mouse_genomes_project 15 86439435 86443986 - MGP_WSBEiJ_P0041182 Cdpf1 protein_coding protein_coding MGP_WSBEiJ_T0041183.1 MGP_WSBEiJ_G0021501.1 mouse_genomes_project 15 86439445 86444593 - MGP_WSBEiJ_P0041183 Cdpf1 protein_coding protein_coding MGP_WSBEiJ_T0041184.1 MGP_WSBEiJ_G0021501.1 mouse_genomes_project 15 86440432 86444555 - MGP_WSBEiJ_P0041184 Cdpf1 protein_coding protein_coding MGP_WSBEiJ_T0016871.1 MGP_WSBEiJ_G0014719.1 mouse_genomes_project 15 66093120 66135953 + Gm2895 processed_transcript processed_transcript MGP_WSBEiJ_T0096967.1 MGP_WSBEiJ_G0035648.1 mouse_genomes_project 15 10174382 10174482 + Gm24664 rRNA rRNA MGP_WSBEiJ_T0039724.1 MGP_WSBEiJ_G0021043.1 mouse_genomes_project 15 8087706 8117426 + MGP_WSBEiJ_P0039724 Slc45a2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041426.1 MGP_WSBEiJ_G0021568.1 mouse_genomes_project 15 95735750 96216926 + MGP_WSBEiJ_P0041426 Tmem117 protein_coding protein_coding MGP_WSBEiJ_T0009934.1 MGP_WSBEiJ_G0008091.1 mouse_genomes_project 15 103027257 103027340 + Mir1941 miRNA miRNA MGP_WSBEiJ_T0009870.1 MGP_WSBEiJ_G0008027.1 mouse_genomes_project 15 2720881 2720995 + Gm27760 miRNA miRNA MGP_WSBEiJ_T0009914.1 MGP_WSBEiJ_G0008071.1 mouse_genomes_project 15 82803976 82804036 + Mir7684 miRNA miRNA MGP_WSBEiJ_T0039613.1 MGP_WSBEiJ_G0021014.1 mouse_genomes_project 15 3594546 3689403 + MGP_WSBEiJ_P0039613 Rictor protein_coding protein_coding MGP_WSBEiJ_T0097928.1 MGP_WSBEiJ_G0036591.1 mouse_genomes_project 15 101259089 101259196 - Gm25897 snRNA snRNA MGP_WSBEiJ_T0041843.1 MGP_WSBEiJ_G0021719.1 mouse_genomes_project 15 104097699 104110046 - MGP_WSBEiJ_P0041843 Aaas protein_coding protein_coding MGP_WSBEiJ_T0006656.1 MGP_WSBEiJ_G0005500.1 mouse_genomes_project 15 36973643 37121200 - lincRNA lincRNA MGP_WSBEiJ_T0040470.1 MGP_WSBEiJ_G0021293.1 mouse_genomes_project 15 75954403 75957693 + MGP_WSBEiJ_P0040470 Exosc4 protein_coding protein_coding MGP_WSBEiJ_T0040471.1 MGP_WSBEiJ_G0021293.1 mouse_genomes_project 15 75954597 75956110 + Exosc4 protein_coding processed_transcript MGP_WSBEiJ_T0040408.1 MGP_WSBEiJ_G0021281.1 mouse_genomes_project 15 75596338 75609583 - MGP_WSBEiJ_P0040408 Fam83h protein_coding protein_coding MGP_WSBEiJ_T0040409.1 MGP_WSBEiJ_G0021281.1 mouse_genomes_project 15 75596338 75604742 - MGP_WSBEiJ_P0040409 Fam83h protein_coding protein_coding MGP_WSBEiJ_T0041115.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84378324 84584510 - MGP_WSBEiJ_P0041115 Efcab6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041116.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84378799 84584456 - MGP_WSBEiJ_P0041116 Efcab6 protein_coding protein_coding MGP_WSBEiJ_T0041117.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84378801 84432722 - Efcab6 protein_coding processed_transcript MGP_WSBEiJ_T0041118.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84378854 84446137 - Efcab6 protein_coding retained_intron MGP_WSBEiJ_T0041119.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84384525 84397528 - Efcab6 protein_coding processed_transcript MGP_WSBEiJ_T0041120.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84438639 84456632 - MGP_WSBEiJ_P0041120 Efcab6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041121.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84476431 84479078 - Efcab6 protein_coding processed_transcript MGP_WSBEiJ_T0041122.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84483744 84500334 - Efcab6 protein_coding processed_transcript MGP_WSBEiJ_T0041123.1 MGP_WSBEiJ_G0021477.1 mouse_genomes_project 15 84535973 84584486 - Efcab6 protein_coding processed_transcript MGP_WSBEiJ_T0041587.1 MGP_WSBEiJ_G0021626.1 mouse_genomes_project 15 100410668 100410983 + MGP_WSBEiJ_P0041587 Gm8973 protein_coding protein_coding MGP_WSBEiJ_T0041054.1 MGP_WSBEiJ_G0021459.1 mouse_genomes_project 15 83165920 83171653 - MGP_WSBEiJ_P0041054 Cyp2d40 protein_coding unknown_likely_coding MGP_WSBEiJ_T0097908.1 MGP_WSBEiJ_G0036571.1 mouse_genomes_project 15 71746142 71746204 - Gm24390 snRNA snRNA MGP_WSBEiJ_T0006718.1 MGP_WSBEiJ_G0005540.1 mouse_genomes_project 15 104910452 104912771 - Gm28265 lincRNA lincRNA MGP_WSBEiJ_T0041145.1 MGP_WSBEiJ_G0021487.1 mouse_genomes_project 15 85285556 85334384 + MGP_WSBEiJ_P0041145 Arhgap8 protein_coding protein_coding MGP_WSBEiJ_T0041146.1 MGP_WSBEiJ_G0021487.1 mouse_genomes_project 15 85285556 85334384 + MGP_WSBEiJ_P0041146 Arhgap8 protein_coding protein_coding MGP_WSBEiJ_T0041147.1 MGP_WSBEiJ_G0021487.1 mouse_genomes_project 15 85285587 85321414 + Arhgap8 protein_coding retained_intron MGP_WSBEiJ_T0041148.1 MGP_WSBEiJ_G0021487.1 mouse_genomes_project 15 85299442 85334381 + MGP_WSBEiJ_P0041148 Arhgap8 protein_coding protein_coding MGP_WSBEiJ_T0041149.1 MGP_WSBEiJ_G0021487.1 mouse_genomes_project 15 85309407 85328270 + Arhgap8 protein_coding processed_transcript MGP_WSBEiJ_T0041150.1 MGP_WSBEiJ_G0021487.1 mouse_genomes_project 15 85332087 85334117 + Arhgap8 protein_coding retained_intron MGP_WSBEiJ_T0006650.1 MGP_WSBEiJ_G0005494.1 mouse_genomes_project 15 30264228 30268344 - Snhg18 lincRNA lincRNA MGP_WSBEiJ_T0040644.1 MGP_WSBEiJ_G0021339.1 mouse_genomes_project 15 77594472 77622198 + MGP_WSBEiJ_P0040644 protein_coding protein_coding MGP_WSBEiJ_T0041597.1 MGP_WSBEiJ_G0021634.1 mouse_genomes_project 15 100700655 100716559 - MGP_WSBEiJ_P0041597 Fam186b protein_coding protein_coding MGP_WSBEiJ_T0041786.1 MGP_WSBEiJ_G0021695.1 mouse_genomes_project 15 103497395 103507676 - MGP_WSBEiJ_P0041786 Krt72 protein_coding protein_coding MGP_WSBEiJ_T0041787.1 MGP_WSBEiJ_G0021695.1 mouse_genomes_project 15 103497556 103499929 - Krt72 protein_coding processed_transcript MGP_WSBEiJ_T0099142.1 MGP_WSBEiJ_G0037805.1 mouse_genomes_project 15 27832166 27832300 - Gm23033 snoRNA snoRNA MGP_WSBEiJ_T0011185.1 MGP_WSBEiJ_G0009342.1 mouse_genomes_project 15 34146745 34147000 + Gm25372 misc_RNA misc_RNA MGP_WSBEiJ_T0040483.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75979509 75983588 - Sharpin protein_coding retained_intron MGP_WSBEiJ_T0040484.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75979509 75983589 - MGP_WSBEiJ_P0040484 Sharpin protein_coding protein_coding MGP_WSBEiJ_T0040485.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75979510 75983525 - Sharpin protein_coding retained_intron MGP_WSBEiJ_T0040486.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75979510 75983553 - Sharpin protein_coding retained_intron MGP_WSBEiJ_T0040487.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75979523 75980162 - MGP_WSBEiJ_P0040487 Sharpin protein_coding protein_coding MGP_WSBEiJ_T0040488.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75979587 75980673 - Sharpin protein_coding retained_intron MGP_WSBEiJ_T0040489.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75980106 75983228 - MGP_WSBEiJ_P0040489 Sharpin protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040490.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75980326 75983169 - Sharpin protein_coding retained_intron MGP_WSBEiJ_T0040491.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75980374 75983160 - Sharpin protein_coding retained_intron MGP_WSBEiJ_T0040492.1 MGP_WSBEiJ_G0021296.1 mouse_genomes_project 15 75981089 75983190 - Sharpin protein_coding retained_intron MGP_WSBEiJ_T0041681.1 MGP_WSBEiJ_G0021657.1 mouse_genomes_project 15 101819495 101946849 + MGP_WSBEiJ_P0041681 Methig1 protein_coding protein_coding MGP_WSBEiJ_T0041682.1 MGP_WSBEiJ_G0021657.1 mouse_genomes_project 15 101819512 101946722 + MGP_WSBEiJ_P0041682 Methig1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006708.1 MGP_WSBEiJ_G0005531.1 mouse_genomes_project 15 100389961 100393294 + 4930578M01Rik lincRNA lincRNA MGP_WSBEiJ_T0039936.1 MGP_WSBEiJ_G0021116.1 mouse_genomes_project 15 35610024 35625008 + MGP_WSBEiJ_P0039936 4930447A16Rik protein_coding protein_coding MGP_WSBEiJ_T0039727.1 MGP_WSBEiJ_G0021046.1 mouse_genomes_project 15 8502464 8518460 - MGP_WSBEiJ_P0039727 Tars protein_coding protein_coding MGP_WSBEiJ_T0016887.1 MGP_WSBEiJ_G0014728.1 mouse_genomes_project 15 90380066 90383648 - Gm15609 processed_transcript processed_transcript MGP_WSBEiJ_T0041652.1 MGP_WSBEiJ_G0021646.1 mouse_genomes_project 15 101153072 101156357 - MGP_WSBEiJ_P0041652 Gm17349 protein_coding protein_coding MGP_WSBEiJ_T0097891.1 MGP_WSBEiJ_G0036554.1 mouse_genomes_project 15 34293576 34293735 + Gm22979 snRNA snRNA MGP_WSBEiJ_T0012797.1 MGP_WSBEiJ_G0010927.1 mouse_genomes_project 15 76463074 76463429 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012785.1 MGP_WSBEiJ_G0010915.1 mouse_genomes_project 15 53480050 53481032 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041291.1 MGP_WSBEiJ_G0021532.1 mouse_genomes_project 15 90162333 90164951 + MGP_WSBEiJ_P0041291 Miox protein_coding protein_coding MGP_WSBEiJ_T0041292.1 MGP_WSBEiJ_G0021532.1 mouse_genomes_project 15 90162396 90164060 + Miox protein_coding retained_intron MGP_WSBEiJ_T0041293.1 MGP_WSBEiJ_G0021532.1 mouse_genomes_project 15 90162575 90164571 + Miox protein_coding retained_intron MGP_WSBEiJ_T0041294.1 MGP_WSBEiJ_G0021532.1 mouse_genomes_project 15 90162865 90164348 + MGP_WSBEiJ_P0041294 Miox protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041295.1 MGP_WSBEiJ_G0021532.1 mouse_genomes_project 15 90162866 90164350 + Miox protein_coding retained_intron MGP_WSBEiJ_T0041296.1 MGP_WSBEiJ_G0021532.1 mouse_genomes_project 15 90164368 90164947 + MGP_WSBEiJ_P0041296 Miox protein_coding protein_coding MGP_WSBEiJ_T0009885.1 MGP_WSBEiJ_G0008042.1 mouse_genomes_project 15 36455130 36455239 + Gm24098 miRNA miRNA MGP_WSBEiJ_T0006694.1 MGP_WSBEiJ_G0005522.1 mouse_genomes_project 15 86200050 86212652 + AU022754 lincRNA lincRNA MGP_WSBEiJ_T0040814.1 MGP_WSBEiJ_G0021390.1 mouse_genomes_project 15 79694768 79753979 - MGP_WSBEiJ_P0040814 Fam227a protein_coding protein_coding MGP_WSBEiJ_T0040815.1 MGP_WSBEiJ_G0021390.1 mouse_genomes_project 15 79697875 79753816 - MGP_WSBEiJ_P0040815 Fam227a protein_coding protein_coding MGP_WSBEiJ_T0040816.1 MGP_WSBEiJ_G0021390.1 mouse_genomes_project 15 79697929 79753816 - MGP_WSBEiJ_P0040816 Fam227a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040817.1 MGP_WSBEiJ_G0021390.1 mouse_genomes_project 15 79697929 79753772 - MGP_WSBEiJ_P0040817 Fam227a protein_coding protein_coding MGP_WSBEiJ_T0040818.1 MGP_WSBEiJ_G0021390.1 mouse_genomes_project 15 79725068 79753979 - Fam227a protein_coding retained_intron MGP_WSBEiJ_T0041912.1 MGP_WSBEiJ_G0021737.1 mouse_genomes_project 15 104768886 104817235 + Hoxc5 protein_coding processed_transcript MGP_WSBEiJ_T0041920.1 MGP_WSBEiJ_G0021737.1 mouse_genomes_project 15 104815373 104818988 + MGP_WSBEiJ_P0041920 Hoxc5 protein_coding protein_coding MGP_WSBEiJ_T0039785.1 MGP_WSBEiJ_G0021062.1 mouse_genomes_project 15 22926743 22938430 - MGP_WSBEiJ_P0039785 9230109A22Rik protein_coding protein_coding MGP_WSBEiJ_T0041751.1 MGP_WSBEiJ_G0021675.1 mouse_genomes_project 15 102738193 102742281 + MGP_WSBEiJ_P0041751 Ankrd33 protein_coding protein_coding MGP_WSBEiJ_T0040710.1 MGP_WSBEiJ_G0021363.1 mouse_genomes_project 15 78779386 78810793 - MGP_WSBEiJ_P0040710 Card10 protein_coding protein_coding MGP_WSBEiJ_T0040711.1 MGP_WSBEiJ_G0021363.1 mouse_genomes_project 15 78780257 78810420 - MGP_WSBEiJ_P0040711 Card10 protein_coding protein_coding MGP_WSBEiJ_T0040712.1 MGP_WSBEiJ_G0021363.1 mouse_genomes_project 15 78792438 78795495 - Card10 protein_coding processed_transcript MGP_WSBEiJ_T0097885.1 MGP_WSBEiJ_G0036548.1 mouse_genomes_project 15 9315027 9315136 - Gm25713 snRNA snRNA MGP_WSBEiJ_T0041955.1 MGP_WSBEiJ_G0021753.1 mouse_genomes_project 15 105325443 105352225 + MGP_WSBEiJ_P0041955 Pde1b protein_coding protein_coding MGP_WSBEiJ_T0040824.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79816310 79835056 - Sun2 protein_coding retained_intron MGP_WSBEiJ_T0040825.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79816310 79835134 - MGP_WSBEiJ_P0040825 Sun2 protein_coding protein_coding MGP_WSBEiJ_T0040826.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79816311 79835104 - MGP_WSBEiJ_P0040826 Sun2 protein_coding protein_coding MGP_WSBEiJ_T0040827.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79816313 79835136 - MGP_WSBEiJ_P0040827 Sun2 protein_coding protein_coding MGP_WSBEiJ_T0040828.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79821842 79835104 - Sun2 protein_coding retained_intron MGP_WSBEiJ_T0040829.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79825732 79827581 - Sun2 protein_coding retained_intron MGP_WSBEiJ_T0040830.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79831260 79834715 - MGP_WSBEiJ_P0040830 Sun2 protein_coding protein_coding MGP_WSBEiJ_T0040831.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79832342 79834703 - MGP_WSBEiJ_P0040831 Sun2 protein_coding protein_coding MGP_WSBEiJ_T0040832.1 MGP_WSBEiJ_G0021395.1 mouse_genomes_project 15 79832449 79834692 - MGP_WSBEiJ_P0040832 Sun2 protein_coding protein_coding MGP_WSBEiJ_T0003529.1 MGP_WSBEiJ_G0003203.1 mouse_genomes_project 15 56539802 56541909 - 9330154K18Rik antisense antisense MGP_WSBEiJ_T0040122.1 MGP_WSBEiJ_G0021192.1 mouse_genomes_project 15 57771617 57814964 - MGP_WSBEiJ_P0040122 Tatdn1 protein_coding protein_coding MGP_WSBEiJ_T0040123.1 MGP_WSBEiJ_G0021192.1 mouse_genomes_project 15 57783486 57814934 - MGP_WSBEiJ_P0040123 Tatdn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0003519.1 MGP_WSBEiJ_G0003195.1 mouse_genomes_project 15 2016406 2030410 - Gm15938 antisense antisense MGP_WSBEiJ_T0040120.1 MGP_WSBEiJ_G0021190.1 mouse_genomes_project 15 57754066 57758199 + MGP_WSBEiJ_P0040120 Trmt12 protein_coding protein_coding MGP_WSBEiJ_T0099136.1 MGP_WSBEiJ_G0037799.1 mouse_genomes_project 15 8478316 8478443 - Gm24844 snoRNA snoRNA MGP_WSBEiJ_T0040298.1 MGP_WSBEiJ_G0021242.1 mouse_genomes_project 15 74084840 74088277 + MGP_WSBEiJ_P0040298 Them6 protein_coding protein_coding MGP_WSBEiJ_T0039899.1 MGP_WSBEiJ_G0021105.1 mouse_genomes_project 15 34296451 34299437 + MGP_WSBEiJ_P0039899 Polr2k protein_coding protein_coding MGP_WSBEiJ_T0039900.1 MGP_WSBEiJ_G0021105.1 mouse_genomes_project 15 34296474 34299440 + MGP_WSBEiJ_P0039900 Polr2k protein_coding protein_coding MGP_WSBEiJ_T0041887.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104306808 104407494 - MGP_WSBEiJ_P0041887 protein_coding protein_coding MGP_WSBEiJ_T0041888.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104309450 104309840 - MGP_WSBEiJ_P0041888 protein_coding protein_coding MGP_WSBEiJ_T0041889.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104309450 104407871 - MGP_WSBEiJ_P0041889 protein_coding protein_coding MGP_WSBEiJ_T0041890.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104314386 104407860 - MGP_WSBEiJ_P0041890 protein_coding protein_coding MGP_WSBEiJ_T0041891.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104317447 104407874 - MGP_WSBEiJ_P0041891 protein_coding protein_coding MGP_WSBEiJ_T0041892.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104318127 104407509 - MGP_WSBEiJ_P0041892 protein_coding protein_coding MGP_WSBEiJ_T0041893.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104328034 104407859 - protein_coding retained_intron MGP_WSBEiJ_T0041894.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104330098 104407885 - MGP_WSBEiJ_P0041894 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041895.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104330150 104407343 - MGP_WSBEiJ_P0041895 protein_coding protein_coding MGP_WSBEiJ_T0041896.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104333750 104407488 - MGP_WSBEiJ_P0041896 protein_coding protein_coding MGP_WSBEiJ_T0041897.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104333750 104407867 - MGP_WSBEiJ_P0041897 protein_coding protein_coding MGP_WSBEiJ_T0041898.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104346119 104407491 - protein_coding retained_intron MGP_WSBEiJ_T0041899.1 MGP_WSBEiJ_G0021730.1 mouse_genomes_project 15 104379594 104407885 - protein_coding retained_intron MGP_WSBEiJ_T0012804.1 MGP_WSBEiJ_G0010934.1 mouse_genomes_project 15 84547625 84547962 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097907.1 MGP_WSBEiJ_G0036570.1 mouse_genomes_project 15 64822406 64822595 + Gm23907 snRNA snRNA MGP_WSBEiJ_T0040115.1 MGP_WSBEiJ_G0021187.1 mouse_genomes_project 15 57377435 57526532 + MGP_WSBEiJ_P0040115 Fer1l6 protein_coding protein_coding MGP_WSBEiJ_T0040116.1 MGP_WSBEiJ_G0021187.1 mouse_genomes_project 15 57499346 57509533 + Fer1l6 protein_coding processed_transcript MGP_WSBEiJ_T0040117.1 MGP_WSBEiJ_G0021187.1 mouse_genomes_project 15 57511540 57528694 + Fer1l6 protein_coding retained_intron MGP_WSBEiJ_T0039779.1 MGP_WSBEiJ_G0021061.1 mouse_genomes_project 15 20267051 21147676 + MGP_WSBEiJ_P0039779 Cdh18 protein_coding protein_coding MGP_WSBEiJ_T0039780.1 MGP_WSBEiJ_G0021061.1 mouse_genomes_project 15 20772558 20922632 + Cdh18 protein_coding retained_intron MGP_WSBEiJ_T0039781.1 MGP_WSBEiJ_G0021061.1 mouse_genomes_project 15 20772566 21196095 + Cdh18 protein_coding retained_intron MGP_WSBEiJ_T0039782.1 MGP_WSBEiJ_G0021061.1 mouse_genomes_project 15 20772566 21218076 + MGP_WSBEiJ_P0039782 Cdh18 protein_coding protein_coding MGP_WSBEiJ_T0039783.1 MGP_WSBEiJ_G0021061.1 mouse_genomes_project 15 20921192 21217723 + MGP_WSBEiJ_P0039783 Cdh18 protein_coding protein_coding MGP_WSBEiJ_T0039784.1 MGP_WSBEiJ_G0021061.1 mouse_genomes_project 15 20921354 21217687 + MGP_WSBEiJ_P0039784 Cdh18 protein_coding protein_coding MGP_WSBEiJ_T0040081.1 MGP_WSBEiJ_G0021174.1 mouse_genomes_project 15 56497486 56657118 + MGP_WSBEiJ_P0040081 Zhx2 protein_coding protein_coding MGP_WSBEiJ_T0040082.1 MGP_WSBEiJ_G0021174.1 mouse_genomes_project 15 56498547 56636039 + Zhx2 protein_coding processed_transcript MGP_WSBEiJ_T0040680.1 MGP_WSBEiJ_G0021351.1 mouse_genomes_project 15 78360855 78370974 - MGP_WSBEiJ_P0040680 Tex33 protein_coding protein_coding MGP_WSBEiJ_T0040681.1 MGP_WSBEiJ_G0021351.1 mouse_genomes_project 15 78360855 78378102 - MGP_WSBEiJ_P0040681 Tex33 protein_coding protein_coding MGP_WSBEiJ_T0040682.1 MGP_WSBEiJ_G0021351.1 mouse_genomes_project 15 78360855 78378102 - MGP_WSBEiJ_P0040682 Tex33 protein_coding protein_coding MGP_WSBEiJ_T0040096.1 MGP_WSBEiJ_G0021179.1 mouse_genomes_project 15 56859868 56909852 - MGP_WSBEiJ_P0040096 Gm29394 protein_coding protein_coding MGP_WSBEiJ_T0040099.1 MGP_WSBEiJ_G0021179.1 mouse_genomes_project 15 56862582 56909634 - MGP_WSBEiJ_P0040099 Gm29394 protein_coding protein_coding MGP_WSBEiJ_T0040103.1 MGP_WSBEiJ_G0021179.1 mouse_genomes_project 15 56880903 56909610 - MGP_WSBEiJ_P0040103 Gm29394 protein_coding protein_coding MGP_WSBEiJ_T0040104.1 MGP_WSBEiJ_G0021179.1 mouse_genomes_project 15 56881022 56909633 - MGP_WSBEiJ_P0040104 Gm29394 protein_coding protein_coding MGP_WSBEiJ_T0040276.1 MGP_WSBEiJ_G0021236.1 mouse_genomes_project 15 73169938 73175290 + MGP_WSBEiJ_P0040276 Gm6569 protein_coding protein_coding MGP_WSBEiJ_T0039808.1 MGP_WSBEiJ_G0021069.1 mouse_genomes_project 15 24365936 24729815 - MGP_WSBEiJ_P0039808 Fbxl7 protein_coding protein_coding MGP_WSBEiJ_T0040833.1 MGP_WSBEiJ_G0021396.1 mouse_genomes_project 15 79857340 79871906 - MGP_WSBEiJ_P0040833 Dnal4 protein_coding protein_coding MGP_WSBEiJ_T0040834.1 MGP_WSBEiJ_G0021396.1 mouse_genomes_project 15 79857343 79871990 - MGP_WSBEiJ_P0040834 Dnal4 protein_coding protein_coding MGP_WSBEiJ_T0040835.1 MGP_WSBEiJ_G0021396.1 mouse_genomes_project 15 79860877 79876352 - Dnal4 protein_coding processed_transcript MGP_WSBEiJ_T0040836.1 MGP_WSBEiJ_G0021396.1 mouse_genomes_project 15 79872094 79877229 - Dnal4 protein_coding processed_transcript MGP_WSBEiJ_T0009900.1 MGP_WSBEiJ_G0008057.1 mouse_genomes_project 15 76077517 76077577 + Mir6954 miRNA miRNA MGP_WSBEiJ_T0099162.1 MGP_WSBEiJ_G0037825.1 mouse_genomes_project 15 56983860 56983987 + Gm22488 snoRNA snoRNA MGP_WSBEiJ_T0040267.1 MGP_WSBEiJ_G0021234.1 mouse_genomes_project 15 73055004 73090723 + MGP_WSBEiJ_P0040267 Ptp4a3 protein_coding protein_coding MGP_WSBEiJ_T0040268.1 MGP_WSBEiJ_G0021234.1 mouse_genomes_project 15 73055004 73090723 + MGP_WSBEiJ_P0040268 Ptp4a3 protein_coding protein_coding MGP_WSBEiJ_T0040269.1 MGP_WSBEiJ_G0021234.1 mouse_genomes_project 15 73056790 73090723 + MGP_WSBEiJ_P0040269 Ptp4a3 protein_coding protein_coding MGP_WSBEiJ_T0040270.1 MGP_WSBEiJ_G0021234.1 mouse_genomes_project 15 73079980 73090723 + MGP_WSBEiJ_P0040270 Ptp4a3 protein_coding protein_coding MGP_WSBEiJ_T0039575.1 MGP_WSBEiJ_G0021003.1 mouse_genomes_project 15 1723830 1792577 + MGP_WSBEiJ_P0039575 Mroh2b protein_coding protein_coding MGP_WSBEiJ_T0012784.1 MGP_WSBEiJ_G0010914.1 mouse_genomes_project 15 53024528 53024935 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041793.1 MGP_WSBEiJ_G0021701.1 mouse_genomes_project 15 103640217 103646416 - MGP_WSBEiJ_P0041793 Krt4 protein_coding protein_coding MGP_WSBEiJ_T0041540.1 MGP_WSBEiJ_G0021607.1 mouse_genomes_project 15 99892173 99940076 - MGP_WSBEiJ_P0041540 protein_coding protein_coding MGP_WSBEiJ_T0041541.1 MGP_WSBEiJ_G0021607.1 mouse_genomes_project 15 99892183 99897802 - protein_coding processed_transcript MGP_WSBEiJ_T0041542.1 MGP_WSBEiJ_G0021607.1 mouse_genomes_project 15 99897992 99936797 - MGP_WSBEiJ_P0041542 protein_coding protein_coding MGP_WSBEiJ_T0041543.1 MGP_WSBEiJ_G0021607.1 mouse_genomes_project 15 99897992 99936797 - MGP_WSBEiJ_P0041543 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041544.1 MGP_WSBEiJ_G0021607.1 mouse_genomes_project 15 99898920 99924540 - protein_coding retained_intron MGP_WSBEiJ_T0041545.1 MGP_WSBEiJ_G0021607.1 mouse_genomes_project 15 99899121 99901808 - protein_coding retained_intron MGP_WSBEiJ_T0041546.1 MGP_WSBEiJ_G0021607.1 mouse_genomes_project 15 99899348 99930179 - protein_coding retained_intron MGP_WSBEiJ_T0041547.1 MGP_WSBEiJ_G0021607.1 mouse_genomes_project 15 99903480 99936706 - protein_coding retained_intron MGP_WSBEiJ_T0039723.1 MGP_WSBEiJ_G0021042.1 mouse_genomes_project 15 8065607 8080216 + MGP_WSBEiJ_P0039723 Amacr protein_coding protein_coding MGP_WSBEiJ_T0040235.1 MGP_WSBEiJ_G0021225.1 mouse_genomes_project 15 71033896 71286673 - MGP_WSBEiJ_P0040235 Col22a1 protein_coding protein_coding MGP_WSBEiJ_T0040236.1 MGP_WSBEiJ_G0021225.1 mouse_genomes_project 15 71036551 71258255 - MGP_WSBEiJ_P0040236 Col22a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0040237.1 MGP_WSBEiJ_G0021225.1 mouse_genomes_project 15 71110868 71142236 - MGP_WSBEiJ_P0040237 Col22a1 protein_coding protein_coding MGP_WSBEiJ_T0040238.1 MGP_WSBEiJ_G0021225.1 mouse_genomes_project 15 71149365 71198687 - Col22a1 protein_coding processed_transcript MGP_WSBEiJ_T0040239.1 MGP_WSBEiJ_G0021225.1 mouse_genomes_project 15 71167411 71198712 - MGP_WSBEiJ_P0040239 Col22a1 protein_coding protein_coding MGP_WSBEiJ_T0040907.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81170531 81208859 + MGP_WSBEiJ_P0040907 protein_coding protein_coding MGP_WSBEiJ_T0040908.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81170545 81203089 + MGP_WSBEiJ_P0040908 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040909.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81170565 81208859 + protein_coding processed_transcript MGP_WSBEiJ_T0040910.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81170586 81198756 + protein_coding processed_transcript MGP_WSBEiJ_T0040911.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81170586 81203071 + MGP_WSBEiJ_P0040911 protein_coding protein_coding MGP_WSBEiJ_T0040912.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81170603 81198756 + protein_coding processed_transcript MGP_WSBEiJ_T0040914.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81204511 81206522 + protein_coding retained_intron MGP_WSBEiJ_T0040915.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81204932 81207108 + MGP_WSBEiJ_P0040915 protein_coding protein_coding MGP_WSBEiJ_T0040916.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81205823 81206871 + protein_coding retained_intron MGP_WSBEiJ_T0040917.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81206429 81208459 + protein_coding retained_intron MGP_WSBEiJ_T0040918.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81207206 81208326 + protein_coding retained_intron MGP_WSBEiJ_T0040919.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81207296 81208311 + protein_coding retained_intron MGP_WSBEiJ_T0040920.1 MGP_WSBEiJ_G0021416.1 mouse_genomes_project 15 81207448 81208205 + protein_coding retained_intron MGP_WSBEiJ_T0041339.1 MGP_WSBEiJ_G0021545.1 mouse_genomes_project 15 90358213 90422706 + MGP_WSBEiJ_P0041339 Shank3 protein_coding protein_coding MGP_WSBEiJ_T0041340.1 MGP_WSBEiJ_G0021545.1 mouse_genomes_project 15 90358388 90422706 + MGP_WSBEiJ_P0041340 Shank3 protein_coding protein_coding MGP_WSBEiJ_T0041341.1 MGP_WSBEiJ_G0021545.1 mouse_genomes_project 15 90358654 90361953 + Shank3 protein_coding processed_transcript MGP_WSBEiJ_T0041342.1 MGP_WSBEiJ_G0021545.1 mouse_genomes_project 15 90359814 90422704 + MGP_WSBEiJ_P0041342 Shank3 protein_coding protein_coding MGP_WSBEiJ_T0041343.1 MGP_WSBEiJ_G0021545.1 mouse_genomes_project 15 90385034 90395992 + Shank3 protein_coding processed_transcript MGP_WSBEiJ_T0041344.1 MGP_WSBEiJ_G0021545.1 mouse_genomes_project 15 90392393 90394006 + Shank3 protein_coding processed_transcript MGP_WSBEiJ_T0041345.1 MGP_WSBEiJ_G0021545.1 mouse_genomes_project 15 90394487 90405216 + MGP_WSBEiJ_P0041345 Shank3 protein_coding protein_coding MGP_WSBEiJ_T0039809.1 MGP_WSBEiJ_G0021070.1 mouse_genomes_project 15 25309082 25448811 + MGP_WSBEiJ_P0039809 Ank protein_coding protein_coding MGP_WSBEiJ_T0039810.1 MGP_WSBEiJ_G0021070.1 mouse_genomes_project 15 25425353 25447065 + Ank protein_coding retained_intron MGP_WSBEiJ_T0006719.1 MGP_WSBEiJ_G0005541.1 mouse_genomes_project 15 104933862 104958065 - D930007P13Rik lincRNA lincRNA MGP_WSBEiJ_T0003569.1 MGP_WSBEiJ_G0003235.1 mouse_genomes_project 15 102753980 102755645 - Gm16031 antisense antisense MGP_WSBEiJ_T0040404.1 MGP_WSBEiJ_G0021280.1 mouse_genomes_project 15 75589016 75591073 + Mapk15 protein_coding processed_transcript MGP_WSBEiJ_T0040405.1 MGP_WSBEiJ_G0021280.1 mouse_genomes_project 15 75589016 75594403 + MGP_WSBEiJ_P0040405 Mapk15 protein_coding protein_coding MGP_WSBEiJ_T0040406.1 MGP_WSBEiJ_G0021280.1 mouse_genomes_project 15 75591187 75594403 + Mapk15 protein_coding retained_intron MGP_WSBEiJ_T0040407.1 MGP_WSBEiJ_G0021280.1 mouse_genomes_project 15 75591961 75594403 + Mapk15 protein_coding processed_transcript MGP_WSBEiJ_T0099158.1 MGP_WSBEiJ_G0037821.1 mouse_genomes_project 15 46193777 46193914 + Gm23530 snoRNA snoRNA MGP_WSBEiJ_T0041915.1 MGP_WSBEiJ_G0021739.1 mouse_genomes_project 15 104792214 104795412 + MGP_WSBEiJ_P0041915 Hoxc8 protein_coding protein_coding MGP_WSBEiJ_T0041916.1 MGP_WSBEiJ_G0021739.1 mouse_genomes_project 15 104793496 104795700 + Hoxc8 protein_coding retained_intron MGP_WSBEiJ_T0040027.1 MGP_WSBEiJ_G0021153.1 mouse_genomes_project 15 50696447 50702062 + MGP_WSBEiJ_P0040027 Aard protein_coding protein_coding MGP_WSBEiJ_T0041794.1 MGP_WSBEiJ_G0021702.1 mouse_genomes_project 15 103652415 103665488 - MGP_WSBEiJ_P0041794 Krt79 protein_coding protein_coding MGP_WSBEiJ_T0040354.1 MGP_WSBEiJ_G0021264.1 mouse_genomes_project 15 75172416 75174002 + MGP_WSBEiJ_P0040354 Gpihbp1 protein_coding protein_coding MGP_WSBEiJ_T0040355.1 MGP_WSBEiJ_G0021264.1 mouse_genomes_project 15 75172418 75174002 + MGP_WSBEiJ_P0040355 Gpihbp1 protein_coding protein_coding MGP_WSBEiJ_T0040356.1 MGP_WSBEiJ_G0021264.1 mouse_genomes_project 15 75172442 75175270 + MGP_WSBEiJ_P0040356 Gpihbp1 protein_coding protein_coding MGP_WSBEiJ_T0040357.1 MGP_WSBEiJ_G0021264.1 mouse_genomes_project 15 75172456 75173977 + Gpihbp1 protein_coding retained_intron MGP_WSBEiJ_T0040358.1 MGP_WSBEiJ_G0021264.1 mouse_genomes_project 15 75172456 75173733 + Gpihbp1 protein_coding retained_intron MGP_WSBEiJ_T0099165.1 MGP_WSBEiJ_G0037828.1 mouse_genomes_project 15 61816567 61816701 + Gm22521 snoRNA snoRNA MGP_WSBEiJ_T0040131.1 MGP_WSBEiJ_G0021196.1 mouse_genomes_project 15 58239576 58284366 - MGP_WSBEiJ_P0040131 E430025E21Rik protein_coding protein_coding MGP_WSBEiJ_T0009899.1 MGP_WSBEiJ_G0008056.1 mouse_genomes_project 15 75908154 75908244 - Mir3079 miRNA miRNA MGP_WSBEiJ_T0041166.1 MGP_WSBEiJ_G0021496.1 mouse_genomes_project 15 85786920 85877999 + MGP_WSBEiJ_P0041166 Fbln1 protein_coding protein_coding MGP_WSBEiJ_T0041167.1 MGP_WSBEiJ_G0021496.1 mouse_genomes_project 15 85786976 85839024 + MGP_WSBEiJ_P0041167 Fbln1 protein_coding protein_coding MGP_WSBEiJ_T0041168.1 MGP_WSBEiJ_G0021496.1 mouse_genomes_project 15 85852469 85855387 + Fbln1 protein_coding processed_transcript MGP_WSBEiJ_T0006652.1 MGP_WSBEiJ_G0005496.1 mouse_genomes_project 15 35888366 35908841 + Gm15942 lincRNA lincRNA MGP_WSBEiJ_T0041535.1 MGP_WSBEiJ_G0021604.1 mouse_genomes_project 15 99828898 99831216 - MGP_WSBEiJ_P0041535 Lalba protein_coding protein_coding MGP_WSBEiJ_T0099149.1 MGP_WSBEiJ_G0037812.1 mouse_genomes_project 15 32351432 32351484 - Gm25809 snoRNA snoRNA MGP_WSBEiJ_T0040739.1 MGP_WSBEiJ_G0021372.1 mouse_genomes_project 15 79064838 79074898 + MGP_WSBEiJ_P0040739 Gcat protein_coding protein_coding MGP_WSBEiJ_T0040740.1 MGP_WSBEiJ_G0021372.1 mouse_genomes_project 15 79064838 79079079 + MGP_WSBEiJ_P0040740 Gcat protein_coding protein_coding MGP_WSBEiJ_T0040741.1 MGP_WSBEiJ_G0021372.1 mouse_genomes_project 15 79078432 79080106 + MGP_WSBEiJ_P0040741 Gcat protein_coding protein_coding MGP_WSBEiJ_T0011200.1 MGP_WSBEiJ_G0009357.1 mouse_genomes_project 15 104749134 104749229 + Gm27443 misc_RNA misc_RNA MGP_WSBEiJ_T0041429.1 MGP_WSBEiJ_G0021570.1 mouse_genomes_project 15 96781097 96813998 - MGP_WSBEiJ_P0041429 Dbx2 protein_coding protein_coding MGP_WSBEiJ_T0041125.1 MGP_WSBEiJ_G0021479.1 mouse_genomes_project 15 84633498 84645345 - MGP_WSBEiJ_P0041125 Pnpla5 protein_coding protein_coding MGP_WSBEiJ_T0041864.1 MGP_WSBEiJ_G0021725.1 mouse_genomes_project 15 104275039 104297005 - MGP_WSBEiJ_P0041864 Map3k12 protein_coding protein_coding MGP_WSBEiJ_T0041865.1 MGP_WSBEiJ_G0021725.1 mouse_genomes_project 15 104277289 104290893 - MGP_WSBEiJ_P0041865 Map3k12 protein_coding protein_coding MGP_WSBEiJ_T0041866.1 MGP_WSBEiJ_G0021725.1 mouse_genomes_project 15 104277539 104297233 - MGP_WSBEiJ_P0041866 Map3k12 protein_coding protein_coding MGP_WSBEiJ_T0041868.1 MGP_WSBEiJ_G0021725.1 mouse_genomes_project 15 104284701 104297173 - MGP_WSBEiJ_P0041868 Map3k12 protein_coding protein_coding MGP_WSBEiJ_T0041869.1 MGP_WSBEiJ_G0021725.1 mouse_genomes_project 15 104284763 104297144 - MGP_WSBEiJ_P0041869 Map3k12 protein_coding protein_coding MGP_WSBEiJ_T0041870.1 MGP_WSBEiJ_G0021725.1 mouse_genomes_project 15 104284800 104296985 - MGP_WSBEiJ_P0041870 Map3k12 protein_coding protein_coding MGP_WSBEiJ_T0041871.1 MGP_WSBEiJ_G0021725.1 mouse_genomes_project 15 104285431 104296981 - Map3k12 protein_coding processed_transcript MGP_WSBEiJ_T0041872.1 MGP_WSBEiJ_G0021725.1 mouse_genomes_project 15 104289286 104290985 - Map3k12 protein_coding processed_transcript MGP_WSBEiJ_T0040947.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81838155 81841152 + Ep300 protein_coding processed_transcript MGP_WSBEiJ_T0040948.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81838201 81907575 + MGP_WSBEiJ_P0040948 Ep300 protein_coding protein_coding MGP_WSBEiJ_T0040949.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81839024 81878493 + Ep300 protein_coding retained_intron MGP_WSBEiJ_T0040950.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81866777 81877793 + MGP_WSBEiJ_P0040950 Ep300 protein_coding protein_coding MGP_WSBEiJ_T0040951.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81866795 81869831 + Ep300 protein_coding retained_intron MGP_WSBEiJ_T0040952.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81875336 81880728 + MGP_WSBEiJ_P0040952 Ep300 protein_coding protein_coding MGP_WSBEiJ_T0040953.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81881699 81882138 + MGP_WSBEiJ_P0040953 Ep300 protein_coding protein_coding MGP_WSBEiJ_T0040954.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81888276 81894841 + Ep300 protein_coding retained_intron MGP_WSBEiJ_T0040955.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81890445 81899064 + Ep300 protein_coding retained_intron MGP_WSBEiJ_T0040956.1 MGP_WSBEiJ_G0021425.1 mouse_genomes_project 15 81900500 81904834 + Ep300 protein_coding retained_intron MGP_WSBEiJ_T0016874.1 MGP_WSBEiJ_G0014721.1 mouse_genomes_project 15 72971913 72979428 + 1700010B13Rik processed_transcript lincRNA MGP_WSBEiJ_T0016875.1 MGP_WSBEiJ_G0014721.1 mouse_genomes_project 15 72971935 72973665 + 1700010B13Rik processed_transcript retained_intron MGP_WSBEiJ_T0040001.1 MGP_WSBEiJ_G0021146.1 mouse_genomes_project 15 42954295 43077271 - MGP_WSBEiJ_P0040001 Sybu protein_coding protein_coding MGP_WSBEiJ_T0040002.1 MGP_WSBEiJ_G0021146.1 mouse_genomes_project 15 42954295 43077271 - MGP_WSBEiJ_P0040002 Sybu protein_coding protein_coding MGP_WSBEiJ_T0040003.1 MGP_WSBEiJ_G0021146.1 mouse_genomes_project 15 42954295 43038153 - MGP_WSBEiJ_P0040003 Sybu protein_coding protein_coding MGP_WSBEiJ_T0039831.1 MGP_WSBEiJ_G0021081.1 mouse_genomes_project 15 29556901 29574648 + MGP_WSBEiJ_P0039831 Cmbl protein_coding protein_coding MGP_WSBEiJ_T0039832.1 MGP_WSBEiJ_G0021081.1 mouse_genomes_project 15 29557015 29577718 + MGP_WSBEiJ_P0039832 Cmbl protein_coding protein_coding MGP_WSBEiJ_T0039833.1 MGP_WSBEiJ_G0021081.1 mouse_genomes_project 15 29560298 29571716 + MGP_WSBEiJ_P0039833 Cmbl protein_coding protein_coding MGP_WSBEiJ_T0041007.1 MGP_WSBEiJ_G0021439.1 mouse_genomes_project 15 82286052 82309534 - MGP_WSBEiJ_P0041007 Desi1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041008.1 MGP_WSBEiJ_G0021439.1 mouse_genomes_project 15 82286052 82309544 - MGP_WSBEiJ_P0041008 Desi1 protein_coding protein_coding MGP_WSBEiJ_T0041009.1 MGP_WSBEiJ_G0021439.1 mouse_genomes_project 15 82287376 82309606 - MGP_WSBEiJ_P0041009 Desi1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041010.1 MGP_WSBEiJ_G0021439.1 mouse_genomes_project 15 82288169 82326788 - Desi1 protein_coding processed_transcript MGP_WSBEiJ_T0041011.1 MGP_WSBEiJ_G0021439.1 mouse_genomes_project 15 82288182 82309392 - MGP_WSBEiJ_P0041011 Desi1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041012.1 MGP_WSBEiJ_G0021439.1 mouse_genomes_project 15 82288245 82309418 - MGP_WSBEiJ_P0041012 Desi1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097913.1 MGP_WSBEiJ_G0036576.1 mouse_genomes_project 15 76928209 76928355 - Gm24056 snRNA snRNA MGP_WSBEiJ_T0041210.1 MGP_WSBEiJ_G0021510.1 mouse_genomes_project 15 88338857 88480203 + MGP_WSBEiJ_P0041210 Fam19a5 protein_coding protein_coding MGP_WSBEiJ_T0012772.1 MGP_WSBEiJ_G0010902.1 mouse_genomes_project 15 34242375 34246178 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041128.1 MGP_WSBEiJ_G0021481.1 mouse_genomes_project 15 84723188 84749085 + MGP_WSBEiJ_P0041128 Samm50 protein_coding protein_coding MGP_WSBEiJ_T0009920.1 MGP_WSBEiJ_G0008077.1 mouse_genomes_project 15 84697281 84697389 + Mir6392 miRNA miRNA MGP_WSBEiJ_T0041750.1 MGP_WSBEiJ_G0021674.1 mouse_genomes_project 15 102662064 102666271 - MGP_WSBEiJ_P0041750 Fignl2 protein_coding protein_coding MGP_WSBEiJ_T0041806.1 MGP_WSBEiJ_G0021710.1 mouse_genomes_project 15 103892718 103911323 + MGP_WSBEiJ_P0041806 Soat2 protein_coding protein_coding MGP_WSBEiJ_T0041807.1 MGP_WSBEiJ_G0021710.1 mouse_genomes_project 15 103893308 103910981 + MGP_WSBEiJ_P0041807 Soat2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040568.1 MGP_WSBEiJ_G0021313.1 mouse_genomes_project 15 76299414 76316074 - MGP_WSBEiJ_P0040568 Cyhr1 protein_coding protein_coding MGP_WSBEiJ_T0040569.1 MGP_WSBEiJ_G0021313.1 mouse_genomes_project 15 76302944 76312939 - MGP_WSBEiJ_P0040569 Cyhr1 protein_coding protein_coding MGP_WSBEiJ_T0040570.1 MGP_WSBEiJ_G0021313.1 mouse_genomes_project 15 76314158 76316130 - MGP_WSBEiJ_P0040570 Cyhr1 protein_coding protein_coding MGP_WSBEiJ_T0040571.1 MGP_WSBEiJ_G0021313.1 mouse_genomes_project 15 76314162 76316121 - MGP_WSBEiJ_P0040571 Cyhr1 protein_coding protein_coding MGP_WSBEiJ_T0006712.1 MGP_WSBEiJ_G0005535.1 mouse_genomes_project 15 102931968 102935362 + 6030408B16Rik lincRNA lincRNA MGP_WSBEiJ_T0006713.1 MGP_WSBEiJ_G0005535.1 mouse_genomes_project 15 102931988 102936263 + 6030408B16Rik lincRNA lincRNA MGP_WSBEiJ_T0012774.1 MGP_WSBEiJ_G0010904.1 mouse_genomes_project 15 35510277 35510955 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040320.1 MGP_WSBEiJ_G0021254.1 mouse_genomes_project 15 74272427 74294848 - 2010109I03Rik protein_coding processed_transcript MGP_WSBEiJ_T0040321.1 MGP_WSBEiJ_G0021254.1 mouse_genomes_project 15 74274512 74277841 - MGP_WSBEiJ_P0040321 2010109I03Rik protein_coding protein_coding MGP_WSBEiJ_T0041808.1 MGP_WSBEiJ_G0021711.1 mouse_genomes_project 15 103926046 103953481 - MGP_WSBEiJ_P0041808 Csad protein_coding unknown_likely_coding MGP_WSBEiJ_T0003556.1 MGP_WSBEiJ_G0003223.1 mouse_genomes_project 15 99397309 99399798 + Gm26513 antisense antisense MGP_WSBEiJ_T0006696.1 MGP_WSBEiJ_G0005524.1 mouse_genomes_project 15 90029384 90032695 - Gm26798 lincRNA lincRNA MGP_WSBEiJ_T0040312.1 MGP_WSBEiJ_G0021250.1 mouse_genomes_project 15 74200642 74204653 - MGP_WSBEiJ_P0040312 Gml2 protein_coding protein_coding MGP_WSBEiJ_T0040313.1 MGP_WSBEiJ_G0021250.1 mouse_genomes_project 15 74200644 74205854 - MGP_WSBEiJ_P0040313 Gml2 protein_coding protein_coding MGP_WSBEiJ_T0040315.1 MGP_WSBEiJ_G0021250.1 mouse_genomes_project 15 74201002 74205854 - MGP_WSBEiJ_P0040315 Gml2 protein_coding protein_coding MGP_WSBEiJ_T0039697.1 MGP_WSBEiJ_G0021035.1 mouse_genomes_project 15 7435869 7452075 + MGP_WSBEiJ_P0039697 Agxt2 protein_coding protein_coding MGP_WSBEiJ_T0039698.1 MGP_WSBEiJ_G0021035.1 mouse_genomes_project 15 7435874 7488515 + MGP_WSBEiJ_P0039698 Agxt2 protein_coding protein_coding MGP_WSBEiJ_T0039699.1 MGP_WSBEiJ_G0021035.1 mouse_genomes_project 15 7435874 7459860 + MGP_WSBEiJ_P0039699 Agxt2 protein_coding protein_coding MGP_WSBEiJ_T0039700.1 MGP_WSBEiJ_G0021035.1 mouse_genomes_project 15 7435916 7488100 + MGP_WSBEiJ_P0039700 Agxt2 protein_coding protein_coding MGP_WSBEiJ_T0040622.1 MGP_WSBEiJ_G0021330.1 mouse_genomes_project 15 76729270 76741269 + MGP_WSBEiJ_P0040622 Apol6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040623.1 MGP_WSBEiJ_G0021330.1 mouse_genomes_project 15 76729616 76737332 + MGP_WSBEiJ_P0040623 Apol6 protein_coding protein_coding MGP_WSBEiJ_T0040624.1 MGP_WSBEiJ_G0021330.1 mouse_genomes_project 15 76729747 76735679 + MGP_WSBEiJ_P0040624 Apol6 protein_coding protein_coding MGP_WSBEiJ_T0040625.1 MGP_WSBEiJ_G0021330.1 mouse_genomes_project 15 76729817 76742074 + MGP_WSBEiJ_P0040625 Apol6 protein_coding protein_coding MGP_WSBEiJ_T0040626.1 MGP_WSBEiJ_G0021330.1 mouse_genomes_project 15 76729819 76736300 + MGP_WSBEiJ_P0040626 Apol6 protein_coding protein_coding MGP_WSBEiJ_T0040627.1 MGP_WSBEiJ_G0021330.1 mouse_genomes_project 15 76730028 76730780 + Apol6 protein_coding processed_transcript MGP_WSBEiJ_T0040628.1 MGP_WSBEiJ_G0021330.1 mouse_genomes_project 15 76737734 76741015 + Apol6 protein_coding processed_transcript MGP_WSBEiJ_T0040629.1 MGP_WSBEiJ_G0021331.1 mouse_genomes_project 15 76764408 76999344 - MGP_WSBEiJ_P0040629 Rbfox2 protein_coding protein_coding MGP_WSBEiJ_T0040630.1 MGP_WSBEiJ_G0021331.1 mouse_genomes_project 15 76764409 76840655 - MGP_WSBEiJ_P0040630 Rbfox2 protein_coding protein_coding MGP_WSBEiJ_T0040631.1 MGP_WSBEiJ_G0021331.1 mouse_genomes_project 15 76764409 76999344 - MGP_WSBEiJ_P0040631 Rbfox2 protein_coding protein_coding MGP_WSBEiJ_T0040632.1 MGP_WSBEiJ_G0021331.1 mouse_genomes_project 15 76764409 76840655 - MGP_WSBEiJ_P0040632 Rbfox2 protein_coding protein_coding MGP_WSBEiJ_T0099148.1 MGP_WSBEiJ_G0037811.1 mouse_genomes_project 15 32194360 32194484 - Gm24500 snoRNA snoRNA MGP_WSBEiJ_T0041277.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90111146 90139600 - MGP_WSBEiJ_P0041277 Sbf1 protein_coding protein_coding MGP_WSBEiJ_T0041278.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90111190 90139544 - MGP_WSBEiJ_P0041278 Sbf1 protein_coding protein_coding MGP_WSBEiJ_T0041279.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90111193 90139560 - MGP_WSBEiJ_P0041279 Sbf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041280.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90111194 90117939 - MGP_WSBEiJ_P0041280 Sbf1 protein_coding protein_coding MGP_WSBEiJ_T0041281.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90111463 90111866 - Sbf1 protein_coding retained_intron MGP_WSBEiJ_T0041282.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90112642 90117452 - Sbf1 protein_coding retained_intron MGP_WSBEiJ_T0041283.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90117642 90119293 - Sbf1 protein_coding retained_intron MGP_WSBEiJ_T0041284.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90122861 90123605 - Sbf1 protein_coding retained_intron MGP_WSBEiJ_T0041285.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90123699 90125775 - Sbf1 protein_coding retained_intron MGP_WSBEiJ_T0041286.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90125427 90126479 - MGP_WSBEiJ_P0041286 Sbf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041287.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90126237 90128240 - Sbf1 protein_coding retained_intron MGP_WSBEiJ_T0041288.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90128032 90129762 - Sbf1 protein_coding retained_intron MGP_WSBEiJ_T0041289.1 MGP_WSBEiJ_G0021530.1 mouse_genomes_project 15 90129155 90130945 - MGP_WSBEiJ_P0041289 Sbf1 protein_coding protein_coding MGP_WSBEiJ_T0100581.1 MGP_WSBEiJ_G0039039.1 mouse_genomes_project 15 74735937 74738157 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0041312.1 MGP_WSBEiJ_G0021536.1 mouse_genomes_project 15 90201435 90207532 - MGP_WSBEiJ_P0041312 Tymp protein_coding protein_coding MGP_WSBEiJ_T0041653.1 MGP_WSBEiJ_G0021647.1 mouse_genomes_project 15 101153183 101164731 + MGP_WSBEiJ_P0041653 Smarcd1 protein_coding protein_coding MGP_WSBEiJ_T0041809.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103953322 103966089 + MGP_WSBEiJ_P0041809 Zfp740 protein_coding protein_coding MGP_WSBEiJ_T0041810.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103953333 103966082 + MGP_WSBEiJ_P0041810 Zfp740 protein_coding protein_coding MGP_WSBEiJ_T0041811.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103953365 103958014 + MGP_WSBEiJ_P0041811 Zfp740 protein_coding protein_coding MGP_WSBEiJ_T0041812.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103953383 103958536 + MGP_WSBEiJ_P0041812 Zfp740 protein_coding protein_coding MGP_WSBEiJ_T0041813.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103954283 103966090 + MGP_WSBEiJ_P0041813 Zfp740 protein_coding protein_coding MGP_WSBEiJ_T0041814.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103954420 103958450 + MGP_WSBEiJ_P0041814 Zfp740 protein_coding protein_coding MGP_WSBEiJ_T0041815.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103954454 103958438 + MGP_WSBEiJ_P0041815 Zfp740 protein_coding protein_coding MGP_WSBEiJ_T0041816.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103957289 103958320 + Zfp740 protein_coding retained_intron MGP_WSBEiJ_T0041817.1 MGP_WSBEiJ_G0021712.1 mouse_genomes_project 15 103957933 103966085 + Zfp740 protein_coding retained_intron MGP_WSBEiJ_T0040125.1 MGP_WSBEiJ_G0021194.1 mouse_genomes_project 15 57822322 57856628 - MGP_WSBEiJ_P0040125 Mtss1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0040126.1 MGP_WSBEiJ_G0021194.1 mouse_genomes_project 15 57822475 57975181 - MGP_WSBEiJ_P0040126 Mtss1 protein_coding protein_coding MGP_WSBEiJ_T0040985.1 MGP_WSBEiJ_G0021431.1 mouse_genomes_project 15 82114658 82115015 - MGP_WSBEiJ_P0040985 Gm8444 protein_coding protein_coding MGP_WSBEiJ_T0040687.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78411779 78423329 + MGP_WSBEiJ_P0040687 Kctd17 protein_coding protein_coding MGP_WSBEiJ_T0040688.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78411779 78423329 + MGP_WSBEiJ_P0040688 Kctd17 protein_coding protein_coding MGP_WSBEiJ_T0040689.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78411843 78423741 + MGP_WSBEiJ_P0040689 Kctd17 protein_coding protein_coding MGP_WSBEiJ_T0040690.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78411877 78423675 + MGP_WSBEiJ_P0040690 Kctd17 protein_coding protein_coding MGP_WSBEiJ_T0040691.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78411906 78419102 + Kctd17 protein_coding retained_intron MGP_WSBEiJ_T0040692.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78412011 78423479 + MGP_WSBEiJ_P0040692 Kctd17 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040693.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78413319 78423412 + MGP_WSBEiJ_P0040693 Kctd17 protein_coding protein_coding MGP_WSBEiJ_T0040694.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78416227 78420976 + Kctd17 protein_coding retained_intron MGP_WSBEiJ_T0040695.1 MGP_WSBEiJ_G0021354.1 mouse_genomes_project 15 78417222 78420821 + Kctd17 protein_coding retained_intron MGP_WSBEiJ_T0041259.1 MGP_WSBEiJ_G0021524.1 mouse_genomes_project 15 89932217 89937561 - Hdac10 protein_coding processed_transcript MGP_WSBEiJ_T0041260.1 MGP_WSBEiJ_G0021524.1 mouse_genomes_project 15 89932217 89937608 - MGP_WSBEiJ_P0041260 Hdac10 protein_coding protein_coding MGP_WSBEiJ_T0041261.1 MGP_WSBEiJ_G0021524.1 mouse_genomes_project 15 89932219 89937569 - Hdac10 protein_coding retained_intron MGP_WSBEiJ_T0041262.1 MGP_WSBEiJ_G0021524.1 mouse_genomes_project 15 89932219 89937559 - Hdac10 protein_coding retained_intron MGP_WSBEiJ_T0041263.1 MGP_WSBEiJ_G0021524.1 mouse_genomes_project 15 89932221 89937587 - Hdac10 protein_coding retained_intron MGP_WSBEiJ_T0041264.1 MGP_WSBEiJ_G0021524.1 mouse_genomes_project 15 89932482 89937356 - MGP_WSBEiJ_P0041264 Hdac10 protein_coding protein_coding MGP_WSBEiJ_T0041265.1 MGP_WSBEiJ_G0021524.1 mouse_genomes_project 15 89932584 89934593 - Hdac10 protein_coding processed_transcript MGP_WSBEiJ_T0041266.1 MGP_WSBEiJ_G0021524.1 mouse_genomes_project 15 89934886 89936398 - Hdac10 protein_coding processed_transcript MGP_WSBEiJ_T0041657.1 MGP_WSBEiJ_G0021649.1 mouse_genomes_project 15 101177771 101181251 + MGP_WSBEiJ_P0041657 Cox14 protein_coding protein_coding MGP_WSBEiJ_T0039823.1 MGP_WSBEiJ_G0021077.1 mouse_genomes_project 15 29237101 29237518 + MGP_WSBEiJ_P0039823 Fam136b-ps protein_coding protein_coding MGP_WSBEiJ_T0041029.1 MGP_WSBEiJ_G0021444.1 mouse_genomes_project 15 82511164 82516992 - MGP_WSBEiJ_P0041029 Shisa8 protein_coding protein_coding MGP_WSBEiJ_T0041448.1 MGP_WSBEiJ_G0021582.1 mouse_genomes_project 15 98963908 98997334 - MGP_WSBEiJ_P0041448 Rpap3 protein_coding protein_coding MGP_WSBEiJ_T0016882.1 MGP_WSBEiJ_G0014727.1 mouse_genomes_project 15 89878814 89882723 - 1810021B22Rik processed_transcript antisense MGP_WSBEiJ_T0016883.1 MGP_WSBEiJ_G0014727.1 mouse_genomes_project 15 89878814 89881871 - 1810021B22Rik processed_transcript lincRNA MGP_WSBEiJ_T0016884.1 MGP_WSBEiJ_G0014727.1 mouse_genomes_project 15 89878816 89882785 - 1810021B22Rik processed_transcript antisense MGP_WSBEiJ_T0016885.1 MGP_WSBEiJ_G0014727.1 mouse_genomes_project 15 89878816 89882723 - 1810021B22Rik processed_transcript antisense MGP_WSBEiJ_T0016886.1 MGP_WSBEiJ_G0014727.1 mouse_genomes_project 15 89878816 89883426 - 1810021B22Rik processed_transcript lincRNA MGP_WSBEiJ_T0040338.1 MGP_WSBEiJ_G0021256.1 mouse_genomes_project 15 74390280 74394767 - MGP_WSBEiJ_P0040338 protein_coding protein_coding MGP_WSBEiJ_T0097903.1 MGP_WSBEiJ_G0036566.1 mouse_genomes_project 15 57696779 57696935 - Gm24041 snRNA snRNA MGP_WSBEiJ_T0099150.1 MGP_WSBEiJ_G0037813.1 mouse_genomes_project 15 32510727 32510859 - Gm24523 snoRNA snoRNA MGP_WSBEiJ_T0041397.1 MGP_WSBEiJ_G0021561.1 mouse_genomes_project 15 94429581 94441809 - MGP_WSBEiJ_P0041397 Zcrb1 protein_coding protein_coding MGP_WSBEiJ_T0041398.1 MGP_WSBEiJ_G0021561.1 mouse_genomes_project 15 94429590 94441842 - MGP_WSBEiJ_P0041398 Zcrb1 protein_coding protein_coding MGP_WSBEiJ_T0041399.1 MGP_WSBEiJ_G0021561.1 mouse_genomes_project 15 94429594 94434704 - Zcrb1 protein_coding retained_intron MGP_WSBEiJ_T0041400.1 MGP_WSBEiJ_G0021561.1 mouse_genomes_project 15 94429597 94434901 - Zcrb1 protein_coding retained_intron MGP_WSBEiJ_T0041401.1 MGP_WSBEiJ_G0021561.1 mouse_genomes_project 15 94431101 94431629 - Zcrb1 protein_coding retained_intron MGP_WSBEiJ_T0041402.1 MGP_WSBEiJ_G0021561.1 mouse_genomes_project 15 94431233 94435191 - Zcrb1 protein_coding retained_intron MGP_WSBEiJ_T0041403.1 MGP_WSBEiJ_G0021561.1 mouse_genomes_project 15 94431285 94441842 - MGP_WSBEiJ_P0041403 Zcrb1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041404.1 MGP_WSBEiJ_G0021561.1 mouse_genomes_project 15 94437589 94441781 - Zcrb1 protein_coding retained_intron MGP_WSBEiJ_T0039769.1 MGP_WSBEiJ_G0021057.1 mouse_genomes_project 15 14094538 14232815 + MGP_WSBEiJ_P0039769 Cdh9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0039770.1 MGP_WSBEiJ_G0021057.1 mouse_genomes_project 15 14148091 14232818 + MGP_WSBEiJ_P0039770 Cdh9 protein_coding protein_coding MGP_WSBEiJ_T0041335.1 MGP_WSBEiJ_G0021544.1 mouse_genomes_project 15 90327576 90332526 - MGP_WSBEiJ_P0041335 Arsa protein_coding protein_coding MGP_WSBEiJ_T0041336.1 MGP_WSBEiJ_G0021544.1 mouse_genomes_project 15 90327628 90331214 - Arsa protein_coding retained_intron MGP_WSBEiJ_T0041337.1 MGP_WSBEiJ_G0021544.1 mouse_genomes_project 15 90328340 90329372 - MGP_WSBEiJ_P0041337 Arsa protein_coding protein_coding MGP_WSBEiJ_T0041338.1 MGP_WSBEiJ_G0021544.1 mouse_genomes_project 15 90331331 90332512 - Arsa protein_coding processed_transcript MGP_WSBEiJ_T0041618.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100825065 100842202 + MGP_WSBEiJ_P0041618 Tmbim6 protein_coding protein_coding MGP_WSBEiJ_T0041619.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100825169 100840787 + MGP_WSBEiJ_P0041619 Tmbim6 protein_coding protein_coding MGP_WSBEiJ_T0041620.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100825169 100840689 + MGP_WSBEiJ_P0041620 Tmbim6 protein_coding protein_coding MGP_WSBEiJ_T0041621.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100825205 100840644 + MGP_WSBEiJ_P0041621 Tmbim6 protein_coding protein_coding MGP_WSBEiJ_T0041622.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100825402 100840688 + MGP_WSBEiJ_P0041622 Tmbim6 protein_coding protein_coding MGP_WSBEiJ_T0041623.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100825776 100838828 + MGP_WSBEiJ_P0041623 Tmbim6 protein_coding protein_coding MGP_WSBEiJ_T0041624.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100825794 100840763 + MGP_WSBEiJ_P0041624 Tmbim6 protein_coding protein_coding MGP_WSBEiJ_T0041625.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100833237 100834255 + MGP_WSBEiJ_P0041625 Tmbim6 protein_coding protein_coding MGP_WSBEiJ_T0041626.1 MGP_WSBEiJ_G0021637.1 mouse_genomes_project 15 100838024 100840944 + Tmbim6 protein_coding retained_intron MGP_WSBEiJ_T0041297.1 MGP_WSBEiJ_G0021533.1 mouse_genomes_project 15 90180515 90185171 - MGP_WSBEiJ_P0041297 Lmf2 protein_coding protein_coding MGP_WSBEiJ_T0039960.1 MGP_WSBEiJ_G0021125.1 mouse_genomes_project 15 37195189 37206400 + MGP_WSBEiJ_P0039960 Cthrc1 protein_coding protein_coding MGP_WSBEiJ_T0039961.1 MGP_WSBEiJ_G0021125.1 mouse_genomes_project 15 37195338 37199820 + Cthrc1 protein_coding processed_transcript MGP_WSBEiJ_T0039962.1 MGP_WSBEiJ_G0021125.1 mouse_genomes_project 15 37202270 37206402 + Cthrc1 protein_coding retained_intron MGP_WSBEiJ_T0003549.1 MGP_WSBEiJ_G0003218.1 mouse_genomes_project 15 86742038 86744447 - Gm15722 antisense antisense MGP_WSBEiJ_T0040729.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 78973302 78994511 + Triobp protein_coding processed_transcript MGP_WSBEiJ_T0040730.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 78973302 79032619 + MGP_WSBEiJ_P0040730 Triobp protein_coding protein_coding MGP_WSBEiJ_T0040731.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 78973302 79032921 + MGP_WSBEiJ_P0040731 Triobp protein_coding protein_coding MGP_WSBEiJ_T0040732.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 78973823 78978756 + Triobp protein_coding retained_intron MGP_WSBEiJ_T0040733.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 79010109 79032918 + MGP_WSBEiJ_P0040733 Triobp protein_coding protein_coding MGP_WSBEiJ_T0040734.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 79010122 79032916 + MGP_WSBEiJ_P0040734 Triobp protein_coding protein_coding MGP_WSBEiJ_T0040735.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 79010144 79021923 + MGP_WSBEiJ_P0040735 Triobp protein_coding protein_coding MGP_WSBEiJ_T0040736.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 79010772 79018504 + MGP_WSBEiJ_P0040736 Triobp protein_coding protein_coding MGP_WSBEiJ_T0040737.1 MGP_WSBEiJ_G0021370.1 mouse_genomes_project 15 79029245 79031761 + Triobp protein_coding processed_transcript MGP_WSBEiJ_T0003525.1 MGP_WSBEiJ_G0003199.1 mouse_genomes_project 15 35546573 35547865 + Gm28221 antisense antisense MGP_WSBEiJ_T0009894.1 MGP_WSBEiJ_G0008051.1 mouse_genomes_project 15 71032268 71032373 + miRNA miRNA MGP_WSBEiJ_T0041316.1 MGP_WSBEiJ_G0021539.1 mouse_genomes_project 15 90220641 90243956 - MGP_WSBEiJ_P0041316 Syce3 protein_coding protein_coding MGP_WSBEiJ_T0041317.1 MGP_WSBEiJ_G0021539.1 mouse_genomes_project 15 90220641 90244196 - MGP_WSBEiJ_P0041317 Syce3 protein_coding protein_coding MGP_WSBEiJ_T0040842.1 MGP_WSBEiJ_G0021399.1 mouse_genomes_project 15 79931866 79942635 - MGP_WSBEiJ_P0040842 Cbx6 protein_coding protein_coding MGP_WSBEiJ_T0040843.1 MGP_WSBEiJ_G0021399.1 mouse_genomes_project 15 79934107 79942184 - MGP_WSBEiJ_P0040843 Cbx6 protein_coding protein_coding MGP_WSBEiJ_T0040844.1 MGP_WSBEiJ_G0021399.1 mouse_genomes_project 15 79935802 79942173 - MGP_WSBEiJ_P0040844 Cbx6 protein_coding protein_coding MGP_WSBEiJ_T0040845.1 MGP_WSBEiJ_G0021399.1 mouse_genomes_project 15 79936601 79941743 - Cbx6 protein_coding processed_transcript MGP_WSBEiJ_T0040846.1 MGP_WSBEiJ_G0021399.1 mouse_genomes_project 15 79936742 79942227 - MGP_WSBEiJ_P0040846 Cbx6 protein_coding protein_coding MGP_WSBEiJ_T0040847.1 MGP_WSBEiJ_G0021399.1 mouse_genomes_project 15 79940516 79942272 - Cbx6 protein_coding processed_transcript MGP_WSBEiJ_T0040848.1 MGP_WSBEiJ_G0021399.1 mouse_genomes_project 15 79941189 79942221 - Cbx6 protein_coding processed_transcript MGP_WSBEiJ_T0100585.1 MGP_WSBEiJ_G0039043.1 mouse_genomes_project 15 74815410 74815639 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097918.1 MGP_WSBEiJ_G0036581.1 mouse_genomes_project 15 83609129 83609280 + Rnu12 snRNA snRNA MGP_WSBEiJ_T0009922.1 MGP_WSBEiJ_G0008079.1 mouse_genomes_project 15 86332184 86332279 + Mirlet7c-2 miRNA miRNA MGP_WSBEiJ_T0040370.1 MGP_WSBEiJ_G0021269.1 mouse_genomes_project 15 75336943 75428405 - MGP_WSBEiJ_P0040370 Zc3h3 protein_coding protein_coding MGP_WSBEiJ_T0040371.1 MGP_WSBEiJ_G0021269.1 mouse_genomes_project 15 75337430 75428385 - MGP_WSBEiJ_P0040371 Zc3h3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009903.1 MGP_WSBEiJ_G0008060.1 mouse_genomes_project 15 79029286 79029348 + Mir6956 miRNA miRNA MGP_WSBEiJ_T0040933.1 MGP_WSBEiJ_G0021421.1 mouse_genomes_project 15 81597457 81634973 - MGP_WSBEiJ_P0040933 St13 protein_coding protein_coding MGP_WSBEiJ_T0040934.1 MGP_WSBEiJ_G0021421.1 mouse_genomes_project 15 81599245 81634524 - MGP_WSBEiJ_P0040934 St13 protein_coding protein_coding MGP_WSBEiJ_T0040935.1 MGP_WSBEiJ_G0021421.1 mouse_genomes_project 15 81611547 81634313 - MGP_WSBEiJ_P0040935 St13 protein_coding protein_coding MGP_WSBEiJ_T0040936.1 MGP_WSBEiJ_G0021421.1 mouse_genomes_project 15 81623369 81635007 - MGP_WSBEiJ_P0040936 St13 protein_coding protein_coding MGP_WSBEiJ_T0040937.1 MGP_WSBEiJ_G0021421.1 mouse_genomes_project 15 81625987 81635003 - MGP_WSBEiJ_P0040937 St13 protein_coding protein_coding MGP_WSBEiJ_T0041844.1 MGP_WSBEiJ_G0021720.1 mouse_genomes_project 15 104117427 104129450 - MGP_WSBEiJ_P0041844 Sp7 protein_coding protein_coding MGP_WSBEiJ_T0041853.1 MGP_WSBEiJ_G0021722.1 mouse_genomes_project 15 104218781 104229566 + MGP_WSBEiJ_P0041853 Amhr2 protein_coding protein_coding MGP_WSBEiJ_T0041854.1 MGP_WSBEiJ_G0021722.1 mouse_genomes_project 15 104227094 104229481 + MGP_WSBEiJ_P0041854 Amhr2 protein_coding protein_coding MGP_WSBEiJ_T0041855.1 MGP_WSBEiJ_G0021722.1 mouse_genomes_project 15 104227258 104227807 + Amhr2 protein_coding retained_intron MGP_WSBEiJ_T0041129.1 MGP_WSBEiJ_G0021482.1 mouse_genomes_project 15 84768001 84859628 + MGP_WSBEiJ_P0041129 Parvb protein_coding protein_coding MGP_WSBEiJ_T0041130.1 MGP_WSBEiJ_G0021482.1 mouse_genomes_project 15 84768024 84812940 + MGP_WSBEiJ_P0041130 Parvb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041131.1 MGP_WSBEiJ_G0021482.1 mouse_genomes_project 15 84798057 84832036 + Parvb protein_coding processed_transcript MGP_WSBEiJ_T0041347.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90444732 90454087 - MGP_WSBEiJ_P0041347 Rabl2 protein_coding protein_coding MGP_WSBEiJ_T0041348.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90444736 90454029 - Rabl2 protein_coding retained_intron MGP_WSBEiJ_T0041349.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90444736 90454028 - MGP_WSBEiJ_P0041349 Rabl2 protein_coding protein_coding MGP_WSBEiJ_T0041350.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90445244 90452566 - MGP_WSBEiJ_P0041350 Rabl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041351.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90445514 90446754 - Rabl2 protein_coding retained_intron MGP_WSBEiJ_T0041352.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90445556 90454054 - MGP_WSBEiJ_P0041352 Rabl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041353.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90445584 90454003 - MGP_WSBEiJ_P0041353 Rabl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041354.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90445599 90446529 - MGP_WSBEiJ_P0041354 Rabl2 protein_coding protein_coding MGP_WSBEiJ_T0041355.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90445845 90454050 - MGP_WSBEiJ_P0041355 Rabl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041356.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90448422 90454069 - Rabl2 protein_coding retained_intron MGP_WSBEiJ_T0041357.1 MGP_WSBEiJ_G0021547.1 mouse_genomes_project 15 90450071 90454040 - Rabl2 protein_coding processed_transcript MGP_WSBEiJ_T0009911.1 MGP_WSBEiJ_G0008068.1 mouse_genomes_project 15 81838937 81838991 + Gm23880 miRNA miRNA MGP_WSBEiJ_T0040751.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79175803 79181371 - 1700088E04Rik protein_coding processed_transcript MGP_WSBEiJ_T0040752.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79181109 79187691 - MGP_WSBEiJ_P0040752 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040753.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79181109 79187639 - MGP_WSBEiJ_P0040753 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040754.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79181115 79187705 - MGP_WSBEiJ_P0040754 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040755.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79181446 79187682 - MGP_WSBEiJ_P0040755 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040756.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79181463 79183172 - 1700088E04Rik protein_coding processed_transcript MGP_WSBEiJ_T0040757.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79181471 79187686 - MGP_WSBEiJ_P0040757 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040758.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79181510 79187657 - MGP_WSBEiJ_P0040758 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040759.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79181536 79187634 - MGP_WSBEiJ_P0040759 1700088E04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040760.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79183590 79187655 - MGP_WSBEiJ_P0040760 1700088E04Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040761.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79183878 79185729 - MGP_WSBEiJ_P0040761 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040762.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79183881 79187705 - MGP_WSBEiJ_P0040762 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040763.1 MGP_WSBEiJ_G0021376.1 mouse_genomes_project 15 79183883 79187430 - MGP_WSBEiJ_P0040763 1700088E04Rik protein_coding protein_coding MGP_WSBEiJ_T0040375.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75487469 75502031 - MGP_WSBEiJ_P0040375 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040376.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75487473 75502016 - MGP_WSBEiJ_P0040376 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040377.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75487473 75502010 - MGP_WSBEiJ_P0040377 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040378.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488161 75501973 - MGP_WSBEiJ_P0040378 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040379.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488161 75501982 - MGP_WSBEiJ_P0040379 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040380.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488161 75496232 - MGP_WSBEiJ_P0040380 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040381.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488163 75502011 - MGP_WSBEiJ_P0040381 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040382.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488163 75501995 - MGP_WSBEiJ_P0040382 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040383.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488165 75489414 - Eef1d protein_coding retained_intron MGP_WSBEiJ_T0040384.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488477 75502005 - MGP_WSBEiJ_P0040384 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040385.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488947 75502232 - MGP_WSBEiJ_P0040385 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040386.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75488954 75501995 - MGP_WSBEiJ_P0040386 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040387.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75489067 75502223 - MGP_WSBEiJ_P0040387 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040388.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75489349 75493929 - Eef1d protein_coding retained_intron MGP_WSBEiJ_T0040389.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75490779 75501995 - Eef1d protein_coding retained_intron MGP_WSBEiJ_T0040390.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75495798 75502223 - MGP_WSBEiJ_P0040390 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040391.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75495937 75498039 - MGP_WSBEiJ_P0040391 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040392.1 MGP_WSBEiJ_G0021273.1 mouse_genomes_project 15 75496181 75501967 - MGP_WSBEiJ_P0040392 Eef1d protein_coding protein_coding MGP_WSBEiJ_T0040251.1 MGP_WSBEiJ_G0021231.1 mouse_genomes_project 15 72832875 72895168 + MGP_WSBEiJ_P0040251 Dennd3 protein_coding protein_coding MGP_WSBEiJ_T0040252.1 MGP_WSBEiJ_G0021231.1 mouse_genomes_project 15 72832987 72895025 + MGP_WSBEiJ_P0040252 Dennd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040253.1 MGP_WSBEiJ_G0021231.1 mouse_genomes_project 15 72840166 72845134 + Dennd3 protein_coding processed_transcript MGP_WSBEiJ_T0040254.1 MGP_WSBEiJ_G0021231.1 mouse_genomes_project 15 72843901 72893880 + MGP_WSBEiJ_P0040254 Dennd3 protein_coding protein_coding MGP_WSBEiJ_T0040255.1 MGP_WSBEiJ_G0021231.1 mouse_genomes_project 15 72879445 72891036 + MGP_WSBEiJ_P0040255 Dennd3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040256.1 MGP_WSBEiJ_G0021231.1 mouse_genomes_project 15 72887792 72890006 + Dennd3 protein_coding retained_intron MGP_WSBEiJ_T0040257.1 MGP_WSBEiJ_G0021231.1 mouse_genomes_project 15 72890006 72893825 + Dennd3 protein_coding retained_intron MGP_WSBEiJ_T0040118.1 MGP_WSBEiJ_G0021188.1 mouse_genomes_project 15 57658865 57700840 - MGP_WSBEiJ_P0040118 Tmem65 protein_coding protein_coding MGP_WSBEiJ_T0012802.1 MGP_WSBEiJ_G0010932.1 mouse_genomes_project 15 81145773 81146168 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012771.1 MGP_WSBEiJ_G0010901.1 mouse_genomes_project 15 32053500 32053874 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041201.1 MGP_WSBEiJ_G0021507.1 mouse_genomes_project 15 86712321 86795698 + MGP_WSBEiJ_P0041201 Gramd4 protein_coding protein_coding MGP_WSBEiJ_T0041202.1 MGP_WSBEiJ_G0021507.1 mouse_genomes_project 15 86713360 86795682 + MGP_WSBEiJ_P0041202 Gramd4 protein_coding protein_coding MGP_WSBEiJ_T0041203.1 MGP_WSBEiJ_G0021507.1 mouse_genomes_project 15 86713505 86795695 + MGP_WSBEiJ_P0041203 Gramd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041204.1 MGP_WSBEiJ_G0021507.1 mouse_genomes_project 15 86722377 86780311 + Gramd4 protein_coding processed_transcript MGP_WSBEiJ_T0041205.1 MGP_WSBEiJ_G0021507.1 mouse_genomes_project 15 86729253 86745821 + Gramd4 protein_coding processed_transcript MGP_WSBEiJ_T0041592.1 MGP_WSBEiJ_G0021630.1 mouse_genomes_project 15 100506505 100516112 + Dnajc22 protein_coding processed_transcript MGP_WSBEiJ_T0041593.1 MGP_WSBEiJ_G0021630.1 mouse_genomes_project 15 100514616 100520136 + MGP_WSBEiJ_P0041593 Dnajc22 protein_coding protein_coding MGP_WSBEiJ_T0039547.1 MGP_WSBEiJ_G0020996.1 mouse_genomes_project 15 122465 145753 - MGP_WSBEiJ_P0039547 Ccdc152 protein_coding protein_coding MGP_WSBEiJ_T0039576.1 MGP_WSBEiJ_G0021004.1 mouse_genomes_project 15 1812890 1888972 - MGP_WSBEiJ_P0039576 C7 protein_coding protein_coding MGP_WSBEiJ_T0012786.1 MGP_WSBEiJ_G0010916.1 mouse_genomes_project 15 58918151 58919913 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012817.1 MGP_WSBEiJ_G0010947.1 mouse_genomes_project 15 101370565 101370835 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040297.1 MGP_WSBEiJ_G0021241.1 mouse_genomes_project 15 74077477 74079708 + MGP_WSBEiJ_P0040297 Psca protein_coding protein_coding MGP_WSBEiJ_T0009928.1 MGP_WSBEiJ_G0008085.1 mouse_genomes_project 15 90128802 90128877 - Mir6959 miRNA miRNA MGP_WSBEiJ_T0040670.1 MGP_WSBEiJ_G0021347.1 mouse_genomes_project 15 77916971 78054285 - MGP_WSBEiJ_P0040670 Cacng2 protein_coding protein_coding MGP_WSBEiJ_T0039977.1 MGP_WSBEiJ_G0021132.1 mouse_genomes_project 15 38276532 38288462 + MGP_WSBEiJ_P0039977 9330182O14Rik protein_coding protein_coding MGP_WSBEiJ_T0041724.1 MGP_WSBEiJ_G0021672.1 mouse_genomes_project 15 102351158 102364183 + MGP_WSBEiJ_P0041724 Slc4a8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041725.1 MGP_WSBEiJ_G0021672.1 mouse_genomes_project 15 102351177 102364063 + Slc4a8 protein_coding retained_intron MGP_WSBEiJ_T0041726.1 MGP_WSBEiJ_G0021672.1 mouse_genomes_project 15 102351219 102409056 + MGP_WSBEiJ_P0041726 Slc4a8 protein_coding protein_coding MGP_WSBEiJ_T0041727.1 MGP_WSBEiJ_G0021672.1 mouse_genomes_project 15 102396171 102399714 + Slc4a8 protein_coding retained_intron MGP_WSBEiJ_T0041728.1 MGP_WSBEiJ_G0021672.1 mouse_genomes_project 15 102405615 102409454 + Slc4a8 protein_coding processed_transcript MGP_WSBEiJ_T0041729.1 MGP_WSBEiJ_G0021672.1 mouse_genomes_project 15 102407778 102409225 + Slc4a8 protein_coding retained_intron MGP_WSBEiJ_T0039957.1 MGP_WSBEiJ_G0021123.1 mouse_genomes_project 15 37048913 37065043 + MGP_WSBEiJ_P0039957 Baalc protein_coding protein_coding MGP_WSBEiJ_T0041430.1 MGP_WSBEiJ_G0021571.1 mouse_genomes_project 15 96950320 96953765 - MGP_WSBEiJ_P0041430 A130051J06Rik protein_coding protein_coding MGP_WSBEiJ_T0040369.1 MGP_WSBEiJ_G0021268.1 mouse_genomes_project 15 75329296 75330376 - MGP_WSBEiJ_P0040369 Mafa protein_coding protein_coding MGP_WSBEiJ_T0040234.1 MGP_WSBEiJ_G0021224.1 mouse_genomes_project 15 70678656 70963392 - MGP_WSBEiJ_P0040234 Fam135b protein_coding protein_coding MGP_WSBEiJ_T0041022.1 MGP_WSBEiJ_G0021441.1 mouse_genomes_project 15 82365670 82426288 + MGP_WSBEiJ_P0041022 Mei1 protein_coding protein_coding MGP_WSBEiJ_T0041023.1 MGP_WSBEiJ_G0021441.1 mouse_genomes_project 15 82365819 82426452 + MGP_WSBEiJ_P0041023 Mei1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041024.1 MGP_WSBEiJ_G0021441.1 mouse_genomes_project 15 82382034 82426438 + MGP_WSBEiJ_P0041024 Mei1 protein_coding protein_coding MGP_WSBEiJ_T0041025.1 MGP_WSBEiJ_G0021441.1 mouse_genomes_project 15 82382046 82426440 + MGP_WSBEiJ_P0041025 Mei1 protein_coding protein_coding MGP_WSBEiJ_T0041026.1 MGP_WSBEiJ_G0021441.1 mouse_genomes_project 15 82382733 82426365 + MGP_WSBEiJ_P0041026 Mei1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000903.1 MGP_WSBEiJ_G0000841.1 mouse_genomes_project 15 4578627 4579003 - TEC TEC MGP_WSBEiJ_T0006698.1 MGP_WSBEiJ_G0005526.1 mouse_genomes_project 15 93333978 93374682 + Gm26760 lincRNA lincRNA MGP_WSBEiJ_T0097914.1 MGP_WSBEiJ_G0036577.1 mouse_genomes_project 15 77758245 77758345 - Gm22107 snRNA snRNA MGP_WSBEiJ_T0041634.1 MGP_WSBEiJ_G0021642.1 mouse_genomes_project 15 101032906 101036665 + MGP_WSBEiJ_P0041634 Aqp5 protein_coding protein_coding MGP_WSBEiJ_T0041635.1 MGP_WSBEiJ_G0021642.1 mouse_genomes_project 15 101033085 101036886 + MGP_WSBEiJ_P0041635 Aqp5 protein_coding protein_coding MGP_WSBEiJ_T0100589.1 MGP_WSBEiJ_G0039047.1 mouse_genomes_project 15 99819064 99824004 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0040026.1 MGP_WSBEiJ_G0021152.1 mouse_genomes_project 15 50605267 50635391 - MGP_WSBEiJ_P0040026 Rad21 protein_coding protein_coding MGP_WSBEiJ_T0041631.1 MGP_WSBEiJ_G0021639.1 mouse_genomes_project 15 100906613 100911242 - MGP_WSBEiJ_P0041631 Bcdin3d protein_coding protein_coding MGP_WSBEiJ_T0041571.1 MGP_WSBEiJ_G0021620.1 mouse_genomes_project 15 100225587 100266522 - MGP_WSBEiJ_P0041571 Kmt2d protein_coding protein_coding MGP_WSBEiJ_T0041572.1 MGP_WSBEiJ_G0021620.1 mouse_genomes_project 15 100225590 100266540 - MGP_WSBEiJ_P0041572 Kmt2d protein_coding protein_coding MGP_WSBEiJ_T0041573.1 MGP_WSBEiJ_G0021620.1 mouse_genomes_project 15 100228209 100231030 - MGP_WSBEiJ_P0041573 Kmt2d protein_coding protein_coding MGP_WSBEiJ_T0041574.1 MGP_WSBEiJ_G0021620.1 mouse_genomes_project 15 100248680 100250276 - MGP_WSBEiJ_P0041574 Kmt2d protein_coding protein_coding MGP_WSBEiJ_T0041230.1 MGP_WSBEiJ_G0021518.1 mouse_genomes_project 15 89765832 89789189 - MGP_WSBEiJ_P0041230 Mlc1 protein_coding protein_coding MGP_WSBEiJ_T0041231.1 MGP_WSBEiJ_G0021518.1 mouse_genomes_project 15 89765832 89789189 - MGP_WSBEiJ_P0041231 Mlc1 protein_coding protein_coding MGP_WSBEiJ_T0040402.1 MGP_WSBEiJ_G0021279.1 mouse_genomes_project 15 75575114 75577698 - MGP_WSBEiJ_P0040402 Ccdc166 protein_coding protein_coding MGP_WSBEiJ_T0040403.1 MGP_WSBEiJ_G0021279.1 mouse_genomes_project 15 75576009 75577685 - MGP_WSBEiJ_P0040403 Ccdc166 protein_coding protein_coding MGP_WSBEiJ_T0041087.1 MGP_WSBEiJ_G0021467.1 mouse_genomes_project 15 83689089 83715923 - MGP_WSBEiJ_P0041087 A4galt protein_coding protein_coding MGP_WSBEiJ_T0041088.1 MGP_WSBEiJ_G0021467.1 mouse_genomes_project 15 83689089 83715880 - MGP_WSBEiJ_P0041088 A4galt protein_coding protein_coding MGP_WSBEiJ_T0039729.1 MGP_WSBEiJ_G0021048.1 mouse_genomes_project 15 9137661 9152375 - MGP_WSBEiJ_P0039729 Sub1 protein_coding protein_coding MGP_WSBEiJ_T0039730.1 MGP_WSBEiJ_G0021048.1 mouse_genomes_project 15 9140363 9153300 - MGP_WSBEiJ_P0039730 Sub1 protein_coding protein_coding MGP_WSBEiJ_T0039731.1 MGP_WSBEiJ_G0021048.1 mouse_genomes_project 15 9142456 9152329 - Sub1 protein_coding retained_intron MGP_WSBEiJ_T0039732.1 MGP_WSBEiJ_G0021048.1 mouse_genomes_project 15 9142776 9152067 - Sub1 protein_coding processed_transcript MGP_WSBEiJ_T0040228.1 MGP_WSBEiJ_G0021222.1 mouse_genomes_project 15 67227352 67407329 - MGP_WSBEiJ_P0040228 Zfat protein_coding protein_coding MGP_WSBEiJ_T0040229.1 MGP_WSBEiJ_G0021222.1 mouse_genomes_project 15 67227907 67407260 - MGP_WSBEiJ_P0040229 Zfat protein_coding protein_coding MGP_WSBEiJ_T0040230.1 MGP_WSBEiJ_G0021222.1 mouse_genomes_project 15 67227908 67407311 - MGP_WSBEiJ_P0040230 Zfat protein_coding protein_coding MGP_WSBEiJ_T0040231.1 MGP_WSBEiJ_G0021222.1 mouse_genomes_project 15 67325307 67407320 - MGP_WSBEiJ_P0040231 Zfat protein_coding protein_coding MGP_WSBEiJ_T0040232.1 MGP_WSBEiJ_G0021222.1 mouse_genomes_project 15 67369451 67407322 - Zfat protein_coding retained_intron MGP_WSBEiJ_T0000917.1 MGP_WSBEiJ_G0000855.1 mouse_genomes_project 15 104863115 104864142 - TEC TEC MGP_WSBEiJ_T0096972.1 MGP_WSBEiJ_G0035653.1 mouse_genomes_project 15 82671769 82671888 + n-R5s41 rRNA rRNA MGP_WSBEiJ_T0040671.1 MGP_WSBEiJ_G0021348.1 mouse_genomes_project 15 78093611 78108246 - MGP_WSBEiJ_P0040671 Ift27 protein_coding protein_coding MGP_WSBEiJ_T0011201.1 MGP_WSBEiJ_G0009358.1 mouse_genomes_project 15 104751064 104751239 + Gm28011 misc_RNA misc_RNA MGP_WSBEiJ_T0040074.1 MGP_WSBEiJ_G0021171.1 mouse_genomes_project 15 54382032 54654195 - MGP_WSBEiJ_P0040074 Sntb1 protein_coding protein_coding MGP_WSBEiJ_T0040075.1 MGP_WSBEiJ_G0021171.1 mouse_genomes_project 15 54535995 54653968 - MGP_WSBEiJ_P0040075 Sntb1 protein_coding protein_coding MGP_WSBEiJ_T0040076.1 MGP_WSBEiJ_G0021171.1 mouse_genomes_project 15 54536969 54653556 - Sntb1 protein_coding processed_transcript MGP_WSBEiJ_T0041627.1 MGP_WSBEiJ_G0021638.1 mouse_genomes_project 15 100854235 100892418 - MGP_WSBEiJ_P0041627 Nckap5l protein_coding protein_coding MGP_WSBEiJ_T0041628.1 MGP_WSBEiJ_G0021638.1 mouse_genomes_project 15 100855811 100856734 - MGP_WSBEiJ_P0041628 Nckap5l protein_coding protein_coding MGP_WSBEiJ_T0041629.1 MGP_WSBEiJ_G0021638.1 mouse_genomes_project 15 100856211 100856730 - Nckap5l protein_coding processed_transcript MGP_WSBEiJ_T0041630.1 MGP_WSBEiJ_G0021638.1 mouse_genomes_project 15 100861631 100892382 - MGP_WSBEiJ_P0041630 Nckap5l protein_coding protein_coding MGP_WSBEiJ_T0041795.1 MGP_WSBEiJ_G0021703.1 mouse_genomes_project 15 103672430 103680848 - MGP_WSBEiJ_P0041795 protein_coding protein_coding MGP_WSBEiJ_T0009923.1 MGP_WSBEiJ_G0008080.1 mouse_genomes_project 15 86332900 86332985 + Mirlet7b miRNA miRNA MGP_WSBEiJ_T0039728.1 MGP_WSBEiJ_G0021047.1 mouse_genomes_project 15 8981030 9062229 - MGP_WSBEiJ_P0039728 Npr3 protein_coding protein_coding MGP_WSBEiJ_T0040639.1 MGP_WSBEiJ_G0021334.1 mouse_genomes_project 15 77279608 77294143 - MGP_WSBEiJ_P0040639 1700025B11Rik protein_coding protein_coding MGP_WSBEiJ_T0016845.1 MGP_WSBEiJ_G0014709.1 mouse_genomes_project 15 868351 872730 - BC037032 processed_transcript TEC MGP_WSBEiJ_T0016846.1 MGP_WSBEiJ_G0014709.1 mouse_genomes_project 15 869923 875631 - BC037032 processed_transcript antisense MGP_WSBEiJ_T0016847.1 MGP_WSBEiJ_G0014709.1 mouse_genomes_project 15 870608 875640 - BC037032 processed_transcript antisense MGP_WSBEiJ_T0016848.1 MGP_WSBEiJ_G0014709.1 mouse_genomes_project 15 871212 875643 - BC037032 processed_transcript antisense MGP_WSBEiJ_T0016849.1 MGP_WSBEiJ_G0014709.1 mouse_genomes_project 15 871808 874314 - BC037032 processed_transcript antisense MGP_WSBEiJ_T0016850.1 MGP_WSBEiJ_G0014709.1 mouse_genomes_project 15 874634 875390 - BC037032 processed_transcript antisense MGP_WSBEiJ_T0041224.1 MGP_WSBEiJ_G0021516.1 mouse_genomes_project 15 89666489 89670012 + MGP_WSBEiJ_P0041224 Pim3 protein_coding protein_coding MGP_WSBEiJ_T0041199.1 MGP_WSBEiJ_G0021506.1 mouse_genomes_project 15 86539542 86686358 - MGP_WSBEiJ_P0041199 Celsr1 protein_coding protein_coding MGP_WSBEiJ_T0041200.1 MGP_WSBEiJ_G0021506.1 mouse_genomes_project 15 86539711 86686351 - MGP_WSBEiJ_P0041200 Celsr1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0009891.1 MGP_WSBEiJ_G0008048.1 mouse_genomes_project 15 61678929 61678999 - Gm24810 miRNA miRNA MGP_WSBEiJ_T0039650.1 MGP_WSBEiJ_G0021024.1 mouse_genomes_project 15 5970635 6031542 + MGP_WSBEiJ_P0039650 Ranbp3l protein_coding protein_coding MGP_WSBEiJ_T0039651.1 MGP_WSBEiJ_G0021024.1 mouse_genomes_project 15 5970635 6003437 + MGP_WSBEiJ_P0039651 Ranbp3l protein_coding protein_coding MGP_WSBEiJ_T0039652.1 MGP_WSBEiJ_G0021024.1 mouse_genomes_project 15 5970635 6030013 + MGP_WSBEiJ_P0039652 Ranbp3l protein_coding unknown_likely_coding MGP_WSBEiJ_T0041101.1 MGP_WSBEiJ_G0021475.1 mouse_genomes_project 15 84098531 84228187 - MGP_WSBEiJ_P0041101 Scube1 protein_coding protein_coding MGP_WSBEiJ_T0041102.1 MGP_WSBEiJ_G0021475.1 mouse_genomes_project 15 84100951 84228187 - Scube1 protein_coding retained_intron MGP_WSBEiJ_T0041103.1 MGP_WSBEiJ_G0021475.1 mouse_genomes_project 15 84100955 84228187 - MGP_WSBEiJ_P0041103 Scube1 protein_coding protein_coding MGP_WSBEiJ_T0041104.1 MGP_WSBEiJ_G0021475.1 mouse_genomes_project 15 84102458 84228187 - MGP_WSBEiJ_P0041104 Scube1 protein_coding protein_coding MGP_WSBEiJ_T0041105.1 MGP_WSBEiJ_G0021475.1 mouse_genomes_project 15 84102458 84228187 - MGP_WSBEiJ_P0041105 Scube1 protein_coding protein_coding MGP_WSBEiJ_T0040028.1 MGP_WSBEiJ_G0021154.1 mouse_genomes_project 15 50966932 51005210 + MGP_WSBEiJ_P0040028 Slc30a8 protein_coding protein_coding MGP_WSBEiJ_T0000916.1 MGP_WSBEiJ_G0000854.1 mouse_genomes_project 15 97936277 97936742 + TEC TEC MGP_WSBEiJ_T0041591.1 MGP_WSBEiJ_G0021629.1 mouse_genomes_project 15 100495785 100498928 - MGP_WSBEiJ_P0041591 C1ql4 protein_coding protein_coding MGP_WSBEiJ_T0041446.1 MGP_WSBEiJ_G0021580.1 mouse_genomes_project 15 98506765 98509984 - MGP_WSBEiJ_P0041446 Amigo2 protein_coding protein_coding MGP_WSBEiJ_T0009943.1 MGP_WSBEiJ_G0008100.1 mouse_genomes_project 15 105176003 105176074 - Mir6963 miRNA miRNA MGP_WSBEiJ_T0009909.1 MGP_WSBEiJ_G0008066.1 mouse_genomes_project 15 80826587 80826651 + Mir6957 miRNA miRNA MGP_WSBEiJ_T0040894.1 MGP_WSBEiJ_G0021413.1 mouse_genomes_project 15 80853165 80881741 + MGP_WSBEiJ_P0040894 Fam83f protein_coding protein_coding MGP_WSBEiJ_T0040765.1 MGP_WSBEiJ_G0021378.1 mouse_genomes_project 15 79201859 79211435 - MGP_WSBEiJ_P0040765 Sox10 protein_coding protein_coding MGP_WSBEiJ_T0006684.1 MGP_WSBEiJ_G0005516.1 mouse_genomes_project 15 79784878 79789436 - Gm26884 lincRNA lincRNA MGP_WSBEiJ_T0041440.1 MGP_WSBEiJ_G0021576.1 mouse_genomes_project 15 97797065 97870998 - MGP_WSBEiJ_P0041440 Slc38a1 protein_coding protein_coding MGP_WSBEiJ_T0041441.1 MGP_WSBEiJ_G0021576.1 mouse_genomes_project 15 97797065 97870617 - MGP_WSBEiJ_P0041441 Slc38a1 protein_coding protein_coding MGP_WSBEiJ_T0041442.1 MGP_WSBEiJ_G0021576.1 mouse_genomes_project 15 97797065 97871904 - MGP_WSBEiJ_P0041442 Slc38a1 protein_coding protein_coding MGP_WSBEiJ_T0012812.1 MGP_WSBEiJ_G0010942.1 mouse_genomes_project 15 92775743 92776280 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0040669.1 MGP_WSBEiJ_G0021346.1 mouse_genomes_project 15 77883462 77895290 - MGP_WSBEiJ_P0040669 Eif3d protein_coding protein_coding MGP_WSBEiJ_T0040572.1 MGP_WSBEiJ_G0021314.1 mouse_genomes_project 15 76316653 76323976 + MGP_WSBEiJ_P0040572 Kifc2 protein_coding protein_coding MGP_WSBEiJ_T0041700.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102145553 102173199 - MGP_WSBEiJ_P0041700 Pou6f1 protein_coding protein_coding MGP_WSBEiJ_T0041701.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102145555 102173294 - MGP_WSBEiJ_P0041701 Pou6f1 protein_coding protein_coding MGP_WSBEiJ_T0041702.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102145555 102163863 - MGP_WSBEiJ_P0041702 Pou6f1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041703.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102145555 102158197 - MGP_WSBEiJ_P0041703 Pou6f1 protein_coding protein_coding MGP_WSBEiJ_T0041704.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102145558 102152860 - Pou6f1 protein_coding retained_intron MGP_WSBEiJ_T0041705.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102148484 102166971 - MGP_WSBEiJ_P0041705 Pou6f1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041706.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102148484 102166971 - MGP_WSBEiJ_P0041706 Pou6f1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041707.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102158122 102163966 - Pou6f1 protein_coding retained_intron MGP_WSBEiJ_T0041708.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102158447 102173177 - Pou6f1 protein_coding processed_transcript MGP_WSBEiJ_T0041709.1 MGP_WSBEiJ_G0021666.1 mouse_genomes_project 15 102160463 102173177 - Pou6f1 protein_coding processed_transcript MGP_WSBEiJ_T0016890.1 MGP_WSBEiJ_G0014730.1 mouse_genomes_project 15 100678237 100690113 + 1700120C14Rik processed_transcript antisense MGP_WSBEiJ_T0016891.1 MGP_WSBEiJ_G0014730.1 mouse_genomes_project 15 100678285 100689853 + 1700120C14Rik processed_transcript antisense MGP_WSBEiJ_T0016892.1 MGP_WSBEiJ_G0014730.1 mouse_genomes_project 15 100678287 100680870 + 1700120C14Rik processed_transcript retained_intron MGP_WSBEiJ_T0003550.1 MGP_WSBEiJ_G0003219.1 mouse_genomes_project 15 86849205 86850628 + Gm15569 antisense antisense MGP_WSBEiJ_T0100584.1 MGP_WSBEiJ_G0039042.1 mouse_genomes_project 15 74799116 74802668 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097920.1 MGP_WSBEiJ_G0036583.1 mouse_genomes_project 15 86876683 86876787 - Gm22818 snRNA snRNA MGP_WSBEiJ_T0099147.1 MGP_WSBEiJ_G0037810.1 mouse_genomes_project 15 30265533 30265604 - Snord123 snoRNA snoRNA MGP_WSBEiJ_T0040986.1 MGP_WSBEiJ_G0021432.1 mouse_genomes_project 15 82119417 82130908 - MGP_WSBEiJ_P0040986 Tob2 protein_coding protein_coding MGP_WSBEiJ_T0097924.1 MGP_WSBEiJ_G0036587.1 mouse_genomes_project 15 94390689 94390793 + Gm26371 snRNA snRNA MGP_WSBEiJ_T0041664.1 MGP_WSBEiJ_G0021651.1 mouse_genomes_project 15 101232236 101346016 - MGP_WSBEiJ_P0041664 Lima1 protein_coding protein_coding MGP_WSBEiJ_T0041665.1 MGP_WSBEiJ_G0021651.1 mouse_genomes_project 15 101235013 101238765 - Lima1 protein_coding retained_intron MGP_WSBEiJ_T0041666.1 MGP_WSBEiJ_G0021651.1 mouse_genomes_project 15 101301665 101346000 - Lima1 protein_coding retained_intron MGP_WSBEiJ_T0041315.1 MGP_WSBEiJ_G0021538.1 mouse_genomes_project 15 90217294 90219335 + MGP_WSBEiJ_P0041315 Klhdc7b protein_coding protein_coding MGP_WSBEiJ_T0099141.1 MGP_WSBEiJ_G0037804.1 mouse_genomes_project 15 24904241 24904372 - Gm23903 snoRNA snoRNA MGP_WSBEiJ_T0041632.1 MGP_WSBEiJ_G0021640.1 mouse_genomes_project 15 100933846 100964821 - MGP_WSBEiJ_P0041632 Faim2 protein_coding protein_coding MGP_WSBEiJ_T0099173.1 MGP_WSBEiJ_G0037836.1 mouse_genomes_project 15 95795274 95795406 - Gm25546 snoRNA snoRNA MGP_WSBEiJ_T0040819.1 MGP_WSBEiJ_G0021391.1 mouse_genomes_project 15 79754249 79762628 + MGP_WSBEiJ_P0040819 Cby1 protein_coding protein_coding MGP_WSBEiJ_T0041393.1 MGP_WSBEiJ_G0021559.1 mouse_genomes_project 15 94278794 94315335 - MGP_WSBEiJ_P0041393 Gxylt1 protein_coding protein_coding MGP_WSBEiJ_T0041394.1 MGP_WSBEiJ_G0021559.1 mouse_genomes_project 15 94284407 94315255 - MGP_WSBEiJ_P0041394 Gxylt1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0041159.1 MGP_WSBEiJ_G0021491.1 mouse_genomes_project 15 85517215 85561665 - MGP_WSBEiJ_P0041159 5031439G07Rik protein_coding protein_coding MGP_WSBEiJ_T0041160.1 MGP_WSBEiJ_G0021491.1 mouse_genomes_project 15 85521265 85534244 - 5031439G07Rik protein_coding retained_intron MGP_WSBEiJ_T0041161.1 MGP_WSBEiJ_G0021491.1 mouse_genomes_project 15 85528947 85562415 - 5031439G07Rik protein_coding processed_transcript MGP_WSBEiJ_T0039842.1 MGP_WSBEiJ_G0021084.1 mouse_genomes_project 15 30199048 30200054 + MGP_WSBEiJ_P0039842 Tas2r119 protein_coding protein_coding MGP_WSBEiJ_T0040966.1 MGP_WSBEiJ_G0021427.1 mouse_genomes_project 15 81937061 81954003 - MGP_WSBEiJ_P0040966 Chadl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040969.1 MGP_WSBEiJ_G0021427.1 mouse_genomes_project 15 81946477 81957262 - MGP_WSBEiJ_P0040969 Chadl protein_coding protein_coding MGP_WSBEiJ_T0040970.1 MGP_WSBEiJ_G0021427.1 mouse_genomes_project 15 81946493 81954182 - MGP_WSBEiJ_P0040970 Chadl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0097916.1 MGP_WSBEiJ_G0036579.1 mouse_genomes_project 15 81237749 81237900 + Gm25131 snRNA snRNA MGP_WSBEiJ_T0006660.1 MGP_WSBEiJ_G0005504.1 mouse_genomes_project 15 41684555 41731521 - Gm10373 lincRNA lincRNA MGP_WSBEiJ_T0003557.1 MGP_WSBEiJ_G0003224.1 mouse_genomes_project 15 99936484 99938745 + 9330020H09Rik antisense antisense MGP_WSBEiJ_T0009898.1 MGP_WSBEiJ_G0008055.1 mouse_genomes_project 15 75863771 75863845 + Mir6953 miRNA miRNA MGP_WSBEiJ_T0039992.1 MGP_WSBEiJ_G0021141.1 mouse_genomes_project 15 42467682 42514688 + MGP_WSBEiJ_P0039992 Trhr protein_coding protein_coding MGP_WSBEiJ_T0039993.1 MGP_WSBEiJ_G0021141.1 mouse_genomes_project 15 42467780 42512931 + MGP_WSBEiJ_P0039993 Trhr protein_coding protein_coding MGP_WSBEiJ_T0011195.1 MGP_WSBEiJ_G0009352.1 mouse_genomes_project 15 92556881 92557167 - Gm25389 misc_RNA misc_RNA MGP_WSBEiJ_T0100226.1 MGP_WSBEiJ_G0038776.1 mouse_genomes_project 15 74948628 74952852 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100227.1 MGP_WSBEiJ_G0038776.1 mouse_genomes_project 15 74948988 74952459 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0006646.1 MGP_WSBEiJ_G0005491.1 mouse_genomes_project 15 15512387 15606612 - 4921515E04Rik lincRNA lincRNA MGP_WSBEiJ_T0039710.1 MGP_WSBEiJ_G0021038.1 mouse_genomes_project 15 7568137 7575796 + MGP_WSBEiJ_P0039710 Rad1 protein_coding protein_coding MGP_WSBEiJ_T0039711.1 MGP_WSBEiJ_G0021038.1 mouse_genomes_project 15 7568168 7575791 + Rad1 protein_coding retained_intron MGP_WSBEiJ_T0039712.1 MGP_WSBEiJ_G0021038.1 mouse_genomes_project 15 7568188 7582799 + MGP_WSBEiJ_P0039712 Rad1 protein_coding protein_coding MGP_WSBEiJ_T0039713.1 MGP_WSBEiJ_G0021038.1 mouse_genomes_project 15 7568199 7572463 + MGP_WSBEiJ_P0039713 Rad1 protein_coding protein_coding MGP_WSBEiJ_T0039714.1 MGP_WSBEiJ_G0021038.1 mouse_genomes_project 15 7568594 7575472 + MGP_WSBEiJ_P0039714 Rad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0039715.1 MGP_WSBEiJ_G0021038.1 mouse_genomes_project 15 7568728 7575781 + MGP_WSBEiJ_P0039715 Rad1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041562.1 MGP_WSBEiJ_G0021613.1 mouse_genomes_project 15 100089738 100107797 + MGP_WSBEiJ_P0041562 Ccdc65 protein_coding protein_coding MGP_WSBEiJ_T0011190.1 MGP_WSBEiJ_G0009347.1 mouse_genomes_project 15 61114559 61114645 + Gm27718 misc_RNA misc_RNA MGP_WSBEiJ_T0040528.1 MGP_WSBEiJ_G0021303.1 mouse_genomes_project 15 76101950 76103981 + MGP_WSBEiJ_P0040528 Scx protein_coding protein_coding MGP_WSBEiJ_T0041924.1 MGP_WSBEiJ_G0021743.1 mouse_genomes_project 15 105005506 105056124 - MGP_WSBEiJ_P0041924 Cbx5 protein_coding protein_coding MGP_WSBEiJ_T0041925.1 MGP_WSBEiJ_G0021743.1 mouse_genomes_project 15 105010647 105029336 - MGP_WSBEiJ_P0041925 Cbx5 protein_coding protein_coding MGP_WSBEiJ_T0041926.1 MGP_WSBEiJ_G0021743.1 mouse_genomes_project 15 105013215 105029289 - MGP_WSBEiJ_P0041926 Cbx5 protein_coding protein_coding MGP_WSBEiJ_T0041927.1 MGP_WSBEiJ_G0021743.1 mouse_genomes_project 15 105027059 105029350 - MGP_WSBEiJ_P0041927 Cbx5 protein_coding protein_coding MGP_WSBEiJ_T0039620.1 MGP_WSBEiJ_G0021016.1 mouse_genomes_project 15 4039476 4102547 + MGP_WSBEiJ_P0039620 Lifr protein_coding protein_coding MGP_WSBEiJ_T0039621.1 MGP_WSBEiJ_G0021016.1 mouse_genomes_project 15 4039489 4096142 + MGP_WSBEiJ_P0039621 Lifr protein_coding protein_coding MGP_WSBEiJ_T0039622.1 MGP_WSBEiJ_G0021016.1 mouse_genomes_project 15 4064971 4108293 + MGP_WSBEiJ_P0039622 Lifr protein_coding protein_coding MGP_WSBEiJ_T0099139.1 MGP_WSBEiJ_G0037802.1 mouse_genomes_project 15 18540733 18540861 + Gm25711 snoRNA snoRNA MGP_WSBEiJ_T0096969.1 MGP_WSBEiJ_G0035650.1 mouse_genomes_project 15 31633443 31633574 - Gm24476 rRNA rRNA MGP_WSBEiJ_T0011189.1 MGP_WSBEiJ_G0009346.1 mouse_genomes_project 15 61081828 61082027 + Gm27782 misc_RNA misc_RNA MGP_WSBEiJ_T0000902.1 MGP_WSBEiJ_G0000840.1 mouse_genomes_project 15 3890457 3896930 + TEC TEC MGP_WSBEiJ_T0100228.1 MGP_WSBEiJ_G0038777.1 mouse_genomes_project 15 99535251 99537294 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100229.1 MGP_WSBEiJ_G0038777.1 mouse_genomes_project 15 99535567 99543873 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100230.1 MGP_WSBEiJ_G0038777.1 mouse_genomes_project 15 99535661 99543873 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100231.1 MGP_WSBEiJ_G0038777.1 mouse_genomes_project 15 99535794 99546041 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0040112.1 MGP_WSBEiJ_G0021185.1 mouse_genomes_project 15 57190236 57251029 - MGP_WSBEiJ_P0040112 Anxa13 protein_coding unknown_likely_coding MGP_WSBEiJ_T0040113.1 MGP_WSBEiJ_G0021185.1 mouse_genomes_project 15 57190236 57223833 - MGP_WSBEiJ_P0040113 Anxa13 protein_coding protein_coding MGP_WSBEiJ_T0009878.1 MGP_WSBEiJ_G0008035.1 mouse_genomes_project 15 33762555 33762643 - Mir599 miRNA miRNA MGP_WSBEiJ_T0040849.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80002206 80021233 + MGP_WSBEiJ_P0040849 Apobec3 protein_coding protein_coding MGP_WSBEiJ_T0040850.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80002241 80021286 + MGP_WSBEiJ_P0040850 Apobec3 protein_coding protein_coding MGP_WSBEiJ_T0040851.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80002605 80012281 + Apobec3 protein_coding processed_transcript MGP_WSBEiJ_T0040852.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80002958 80021178 + MGP_WSBEiJ_P0040852 Apobec3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040853.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80002989 80023055 + MGP_WSBEiJ_P0040853 Apobec3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040854.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80002995 80023772 + MGP_WSBEiJ_P0040854 Apobec3 protein_coding protein_coding MGP_WSBEiJ_T0040855.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80002996 80024122 + MGP_WSBEiJ_P0040855 Apobec3 protein_coding protein_coding MGP_WSBEiJ_T0040856.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80003002 80032572 + MGP_WSBEiJ_P0040856 Apobec3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0040857.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80003031 80023055 + MGP_WSBEiJ_P0040857 Apobec3 protein_coding protein_coding MGP_WSBEiJ_T0040858.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80006610 80012702 + MGP_WSBEiJ_P0040858 Apobec3 protein_coding protein_coding MGP_WSBEiJ_T0040859.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80012339 80021604 + Apobec3 protein_coding retained_intron MGP_WSBEiJ_T0040860.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80015824 80023606 + Apobec3 protein_coding retained_intron MGP_WSBEiJ_T0040861.1 MGP_WSBEiJ_G0021400.1 mouse_genomes_project 15 80021808 80022777 + Apobec3 protein_coding retained_intron MGP_WSBEiJ_T0040047.1 MGP_WSBEiJ_G0021164.1 mouse_genomes_project 15 53739243 53815286 - MGP_WSBEiJ_P0040047 Taf2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0040048.1 MGP_WSBEiJ_G0021164.1 mouse_genomes_project 15 53739246 53797229 - MGP_WSBEiJ_P0040048 Taf2 protein_coding protein_coding MGP_WSBEiJ_T0012793.1 MGP_WSBEiJ_G0010923.1 mouse_genomes_project 15 74081429 74081573 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000912.1 MGP_WSBEiJ_G0000850.1 mouse_genomes_project 15 67489464 67492386 - TEC TEC MGP_WSBEiJ_T0012763.1 MGP_WSBEiJ_G0010893.1 mouse_genomes_project 15 7610618 7611881 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041785.1 MGP_WSBEiJ_G0021694.1 mouse_genomes_project 15 103474709 103484344 - MGP_WSBEiJ_P0041785 Krt74 protein_coding protein_coding MGP_WSBEiJ_T0016876.1 MGP_WSBEiJ_G0014722.1 mouse_genomes_project 15 77613740 77615816 - processed_transcript retained_intron MGP_WSBEiJ_T0040041.1 MGP_WSBEiJ_G0021161.1 mouse_genomes_project 15 53281313 53314224 + MGP_WSBEiJ_P0040041 Mal2 protein_coding protein_coding MGP_WSBEiJ_T0040557.1 MGP_WSBEiJ_G0021310.1 mouse_genomes_project 15 76246790 76261069 - MGP_WSBEiJ_P0040557 Cpsf1 protein_coding protein_coding MGP_WSBEiJ_T0000913.1 MGP_WSBEiJ_G0000851.1 mouse_genomes_project 15 81836954 81837809 - TEC TEC MGP_WSBEiJ_T0041512.1 MGP_WSBEiJ_G0021593.1 mouse_genomes_project 15 99472368 99474696 + MGP_WSBEiJ_P0041512 Ccdc184 protein_coding protein_coding MGP_WSBEiJ_T0041030.1 MGP_WSBEiJ_G0021445.1 mouse_genomes_project 15 82527455 82532488 - MGP_WSBEiJ_P0041030 Tnfrsf13c protein_coding protein_coding MGP_WSBEiJ_T0041482.1 MGP_WSBEiJ_G0021587.1 mouse_genomes_project 15 99148677 99203819 - MGP_WSBEiJ_P0041482 Vdr protein_coding protein_coding MGP_WSBEiJ_T0041483.1 MGP_WSBEiJ_G0021587.1 mouse_genomes_project 15 99151783 99153942 - Vdr protein_coding retained_intron MGP_WSBEiJ_T0041484.1 MGP_WSBEiJ_G0021587.1 mouse_genomes_project 15 99170978 99192054 - MGP_WSBEiJ_P0041484 Vdr protein_coding protein_coding MGP_WSBEiJ_T0041485.1 MGP_WSBEiJ_G0021587.1 mouse_genomes_project 15 99171050 99207192 - MGP_WSBEiJ_P0041485 Vdr protein_coding protein_coding MGP_WSBEiJ_T0041486.1 MGP_WSBEiJ_G0021587.1 mouse_genomes_project 15 99179046 99207192 - MGP_WSBEiJ_P0041486 Vdr protein_coding protein_coding MGP_WSBEiJ_T0041487.1 MGP_WSBEiJ_G0021587.1 mouse_genomes_project 15 99179058 99205071 - MGP_WSBEiJ_P0041487 Vdr protein_coding protein_coding MGP_WSBEiJ_T0040340.1 MGP_WSBEiJ_G0021258.1 mouse_genomes_project 15 74634518 74636946 + MGP_WSBEiJ_P0040340 protein_coding protein_coding MGP_WSBEiJ_T0000908.1 MGP_WSBEiJ_G0000846.1 mouse_genomes_project 15 23013938 23014448 - TEC TEC MGP_WSBEiJ_T0009942.1 MGP_WSBEiJ_G0008099.1 mouse_genomes_project 15 105104346 105104443 + Mir148b miRNA miRNA MGP_WSBEiJ_T0003533.1 MGP_WSBEiJ_G0003207.1 mouse_genomes_project 15 66052652 66054153 + Gm17035 antisense antisense MGP_WSBEiJ_T0100590.1 MGP_WSBEiJ_G0039048.1 mouse_genomes_project 15 99849742 99849980 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0040134.1 MGP_WSBEiJ_G0021198.1 mouse_genomes_project 15 58569446 58577638 + MGP_WSBEiJ_P0040134 Trib1 protein_coding protein_coding MGP_WSBEiJ_T0040135.1 MGP_WSBEiJ_G0021198.1 mouse_genomes_project 15 58569749 58574777 + MGP_WSBEiJ_P0040135 Trib1 protein_coding protein_coding MGP_WSBEiJ_T0006657.1 MGP_WSBEiJ_G0005501.1 mouse_genomes_project 15 38657409 38673775 - Gm16294 lincRNA lincRNA MGP_WSBEiJ_T0009906.1 MGP_WSBEiJ_G0008063.1 mouse_genomes_project 15 79678493 79678617 - Gm27903 miRNA miRNA MGP_WSBEiJ_T0009889.1 MGP_WSBEiJ_G0008046.1 mouse_genomes_project 15 49459221 49459311 - Mir1907 miRNA miRNA MGP_WSBEiJ_T0009937.1 MGP_WSBEiJ_G0008094.1 mouse_genomes_project 15 103427475 103427604 + Gm44323 miRNA miRNA MGP_WSBEiJ_T0041124.1 MGP_WSBEiJ_G0021478.1 mouse_genomes_project 15 84596819 84626664 - MGP_WSBEiJ_P0041124 Sult4a1 protein_coding protein_coding MGP_WSBEiJ_T0009913.1 MGP_WSBEiJ_G0008070.1 mouse_genomes_project 15 82747502 82747588 + Gm25990 miRNA miRNA MGP_WSBEiJ_T0099137.1 MGP_WSBEiJ_G0037800.1 mouse_genomes_project 15 13139635 13139763 + Gm25550 snoRNA snoRNA MGP_WSBEiJ_T0003546.1 MGP_WSBEiJ_G0003215.1 mouse_genomes_project 15 81650424 81654055 - Gm17025 antisense antisense MGP_WSBEiJ_T0000918.1 MGP_WSBEiJ_G0000856.1 mouse_genomes_project 15 105204921 105205258 + TEC TEC MGP_WSBEiJ_T0009932.1 MGP_WSBEiJ_G0008089.1 mouse_genomes_project 15 102226926 102226993 - Mir6961 miRNA miRNA MGP_WSBEiJ_T0041165.1 MGP_WSBEiJ_G0021495.1 mouse_genomes_project 15 85717299 85729732 + MGP_WSBEiJ_P0041165 Ribc2 protein_coding protein_coding MGP_WSBEiJ_T0009924.1 MGP_WSBEiJ_G0008081.1 mouse_genomes_project 15 87773339 87773426 + Gm23416 miRNA miRNA MGP_WSBEiJ_T0096975.1 MGP_WSBEiJ_G0035656.1 mouse_genomes_project 15 102020678 102020788 + n-R5s43 rRNA rRNA MGP_WSBEiJ_T0006733.1 MGP_WSBEiJ_G0005554.1 mouse_genomes_project 16 18415690 18470206 - lincRNA lincRNA MGP_WSBEiJ_T0000924.1 MGP_WSBEiJ_G0000861.1 mouse_genomes_project 16 16300270 16301576 + TEC TEC MGP_WSBEiJ_T0043383.1 MGP_WSBEiJ_G0022094.1 mouse_genomes_project 16 34793523 34798095 + Iqcb1 protein_coding processed_transcript MGP_WSBEiJ_T0043384.1 MGP_WSBEiJ_G0022094.1 mouse_genomes_project 16 34793540 34842516 + MGP_WSBEiJ_P0043384 Iqcb1 protein_coding protein_coding MGP_WSBEiJ_T0043385.1 MGP_WSBEiJ_G0022094.1 mouse_genomes_project 16 34793540 34842508 + MGP_WSBEiJ_P0043385 Iqcb1 protein_coding protein_coding MGP_WSBEiJ_T0043386.1 MGP_WSBEiJ_G0022094.1 mouse_genomes_project 16 34815465 34819806 + Iqcb1 protein_coding retained_intron MGP_WSBEiJ_T0043387.1 MGP_WSBEiJ_G0022094.1 mouse_genomes_project 16 34815860 34819811 + Iqcb1 protein_coding processed_transcript MGP_WSBEiJ_T0043388.1 MGP_WSBEiJ_G0022094.1 mouse_genomes_project 16 34819685 34828558 + Iqcb1 protein_coding processed_transcript MGP_WSBEiJ_T0043389.1 MGP_WSBEiJ_G0022094.1 mouse_genomes_project 16 34819995 34824791 + Iqcb1 protein_coding processed_transcript MGP_WSBEiJ_T0043716.1 MGP_WSBEiJ_G0022175.1 mouse_genomes_project 16 48216628 48279932 + MGP_WSBEiJ_P0043716 Cd47 protein_coding protein_coding MGP_WSBEiJ_T0043717.1 MGP_WSBEiJ_G0022175.1 mouse_genomes_project 16 48216797 48279941 + MGP_WSBEiJ_P0043717 Cd47 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043718.1 MGP_WSBEiJ_G0022175.1 mouse_genomes_project 16 48228971 48275360 + MGP_WSBEiJ_P0043718 Cd47 protein_coding protein_coding MGP_WSBEiJ_T0042519.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14420769 14439389 + MGP_WSBEiJ_P0042519 Lztr1 protein_coding protein_coding MGP_WSBEiJ_T0042520.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14421049 14439387 + MGP_WSBEiJ_P0042520 Lztr1 protein_coding protein_coding MGP_WSBEiJ_T0042521.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14421054 14437900 + Lztr1 protein_coding retained_intron MGP_WSBEiJ_T0042522.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14421054 14424316 + Lztr1 protein_coding retained_intron MGP_WSBEiJ_T0042523.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14421293 14428088 + Lztr1 protein_coding processed_transcript MGP_WSBEiJ_T0042524.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14423152 14434096 + Lztr1 protein_coding processed_transcript MGP_WSBEiJ_T0042525.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14427864 14432617 + Lztr1 protein_coding processed_transcript MGP_WSBEiJ_T0042526.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14431169 14433615 + Lztr1 protein_coding retained_intron MGP_WSBEiJ_T0042527.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14434004 14439387 + MGP_WSBEiJ_P0042527 Lztr1 protein_coding protein_coding MGP_WSBEiJ_T0042528.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14435729 14437304 + Lztr1 protein_coding retained_intron MGP_WSBEiJ_T0042529.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14437146 14438827 + Lztr1 protein_coding retained_intron MGP_WSBEiJ_T0042530.1 MGP_WSBEiJ_G0021888.1 mouse_genomes_project 16 14437919 14439045 + Lztr1 protein_coding retained_intron MGP_WSBEiJ_T0042098.1 MGP_WSBEiJ_G0021786.1 mouse_genomes_project 16 1452486 1478783 - MGP_WSBEiJ_P0042098 Anks3 protein_coding protein_coding MGP_WSBEiJ_T0042918.1 MGP_WSBEiJ_G0021972.1 mouse_genomes_project 16 19619180 19681346 - MGP_WSBEiJ_P0042918 Etv5 protein_coding protein_coding MGP_WSBEiJ_T0042919.1 MGP_WSBEiJ_G0021972.1 mouse_genomes_project 16 19623475 19642835 - MGP_WSBEiJ_P0042919 Etv5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042920.1 MGP_WSBEiJ_G0021972.1 mouse_genomes_project 16 19642869 19681243 - Etv5 protein_coding processed_transcript MGP_WSBEiJ_T0042921.1 MGP_WSBEiJ_G0021972.1 mouse_genomes_project 16 19653894 19681197 - MGP_WSBEiJ_P0042921 Etv5 protein_coding protein_coding MGP_WSBEiJ_T0097982.1 MGP_WSBEiJ_G0036645.1 mouse_genomes_project 16 94738954 94739114 + Gm23692 snRNA snRNA MGP_WSBEiJ_T0043477.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36626209 36658988 + MGP_WSBEiJ_P0043477 Tmem39a protein_coding protein_coding MGP_WSBEiJ_T0043478.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36630319 36659960 + MGP_WSBEiJ_P0043478 Tmem39a protein_coding protein_coding MGP_WSBEiJ_T0043479.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36630319 36659960 + MGP_WSBEiJ_P0043479 Tmem39a protein_coding protein_coding MGP_WSBEiJ_T0043480.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36630368 36654055 + MGP_WSBEiJ_P0043480 Tmem39a protein_coding protein_coding MGP_WSBEiJ_T0043481.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36630393 36640988 + Tmem39a protein_coding processed_transcript MGP_WSBEiJ_T0043482.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36631696 36649798 + MGP_WSBEiJ_P0043482 Tmem39a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043483.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36643239 36653223 + Tmem39a protein_coding retained_intron MGP_WSBEiJ_T0043484.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36643562 36659240 + MGP_WSBEiJ_P0043484 Tmem39a protein_coding protein_coding MGP_WSBEiJ_T0043485.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36649906 36658740 + MGP_WSBEiJ_P0043485 Tmem39a protein_coding protein_coding MGP_WSBEiJ_T0043486.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36653213 36654688 + Tmem39a protein_coding retained_intron MGP_WSBEiJ_T0043487.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36653290 36654437 + Tmem39a protein_coding retained_intron MGP_WSBEiJ_T0043488.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36653305 36658943 + MGP_WSBEiJ_P0043488 Tmem39a protein_coding protein_coding MGP_WSBEiJ_T0043489.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36655008 36659144 + Tmem39a protein_coding processed_transcript MGP_WSBEiJ_T0043490.1 MGP_WSBEiJ_G0022119.1 mouse_genomes_project 16 36655836 36659104 + Tmem39a protein_coding retained_intron MGP_WSBEiJ_T0042164.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5307769 5422314 - MGP_WSBEiJ_P0042164 Usp7 protein_coding protein_coding MGP_WSBEiJ_T0042165.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5307774 5356499 - MGP_WSBEiJ_P0042165 Usp7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042166.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5308320 5356422 - MGP_WSBEiJ_P0042166 Usp7 protein_coding protein_coding MGP_WSBEiJ_T0042167.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5308954 5339834 - Usp7 protein_coding processed_transcript MGP_WSBEiJ_T0042168.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5314356 5317009 - Usp7 protein_coding retained_intron MGP_WSBEiJ_T0042169.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5314855 5315760 - Usp7 protein_coding retained_intron MGP_WSBEiJ_T0042170.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5315654 5316711 - Usp7 protein_coding retained_intron MGP_WSBEiJ_T0042171.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5315829 5324906 - MGP_WSBEiJ_P0042171 Usp7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042172.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5318335 5321958 - Usp7 protein_coding retained_intron MGP_WSBEiJ_T0042173.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5321642 5325104 - Usp7 protein_coding retained_intron MGP_WSBEiJ_T0042174.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5323122 5323487 - Usp7 protein_coding retained_intron MGP_WSBEiJ_T0042175.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5323131 5324397 - Usp7 protein_coding retained_intron MGP_WSBEiJ_T0042176.1 MGP_WSBEiJ_G0021807.1 mouse_genomes_project 16 5324137 5325005 - Usp7 protein_coding retained_intron MGP_WSBEiJ_T0043852.1 MGP_WSBEiJ_G0022217.1 mouse_genomes_project 16 57652702 57653707 - MGP_WSBEiJ_P0043852 Olfr186 protein_coding protein_coding MGP_WSBEiJ_T0043853.1 MGP_WSBEiJ_G0022217.1 mouse_genomes_project 16 57653299 57656477 - MGP_WSBEiJ_P0043853 Olfr186 protein_coding protein_coding MGP_WSBEiJ_T0009960.1 MGP_WSBEiJ_G0008117.1 mouse_genomes_project 16 15235148 15235236 - Gm24572 miRNA miRNA MGP_WSBEiJ_T0012879.1 MGP_WSBEiJ_G0011009.1 mouse_genomes_project 16 55381362 55381999 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044462.1 MGP_WSBEiJ_G0022396.1 mouse_genomes_project 16 98355523 98425191 - MGP_WSBEiJ_P0044462 C2cd2 protein_coding protein_coding MGP_WSBEiJ_T0012839.1 MGP_WSBEiJ_G0010969.1 mouse_genomes_project 16 13715661 13715916 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043905.1 MGP_WSBEiJ_G0022243.1 mouse_genomes_project 16 63620332 63688167 - MGP_WSBEiJ_P0043905 protein_coding protein_coding MGP_WSBEiJ_T0043330.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33804324 33829181 + Kpna1 protein_coding retained_intron MGP_WSBEiJ_T0043331.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33808678 33865131 + MGP_WSBEiJ_P0043331 Kpna1 protein_coding protein_coding MGP_WSBEiJ_T0043332.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33808688 33830967 + Kpna1 protein_coding retained_intron MGP_WSBEiJ_T0043333.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33808717 33846609 + MGP_WSBEiJ_P0043333 Kpna1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043334.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33808945 33840218 + MGP_WSBEiJ_P0043334 Kpna1 protein_coding protein_coding MGP_WSBEiJ_T0043335.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33825901 33861906 + MGP_WSBEiJ_P0043335 Kpna1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043336.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33825967 33848967 + MGP_WSBEiJ_P0043336 Kpna1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043337.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33841101 33863130 + MGP_WSBEiJ_P0043337 Kpna1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043338.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33846708 33861866 + MGP_WSBEiJ_P0043338 Kpna1 protein_coding protein_coding MGP_WSBEiJ_T0043339.1 MGP_WSBEiJ_G0022079.1 mouse_genomes_project 16 33848965 33858709 + Kpna1 protein_coding retained_intron MGP_WSBEiJ_T0009963.1 MGP_WSBEiJ_G0008120.1 mouse_genomes_project 16 16377514 16377624 + Gm23612 miRNA miRNA MGP_WSBEiJ_T0011206.1 MGP_WSBEiJ_G0009363.1 mouse_genomes_project 16 19842994 19843186 + Gm22481 misc_RNA misc_RNA MGP_WSBEiJ_T0009973.1 MGP_WSBEiJ_G0008130.1 mouse_genomes_project 16 29866070 29866199 - Mir1946a miRNA miRNA MGP_WSBEiJ_T0043942.1 MGP_WSBEiJ_G0022254.1 mouse_genomes_project 16 74944574 74989419 - MGP_WSBEiJ_P0043942 Lipi protein_coding protein_coding MGP_WSBEiJ_T0043943.1 MGP_WSBEiJ_G0022254.1 mouse_genomes_project 16 74944604 74972570 - Lipi protein_coding processed_transcript MGP_WSBEiJ_T0043429.1 MGP_WSBEiJ_G0022102.1 mouse_genomes_project 16 35600783 35655837 + MGP_WSBEiJ_P0043429 Hgd protein_coding unknown_likely_coding MGP_WSBEiJ_T0043430.1 MGP_WSBEiJ_G0022102.1 mouse_genomes_project 16 35601213 35652917 + Hgd protein_coding processed_transcript MGP_WSBEiJ_T0043431.1 MGP_WSBEiJ_G0022102.1 mouse_genomes_project 16 35601217 35633089 + Hgd protein_coding retained_intron MGP_WSBEiJ_T0043432.1 MGP_WSBEiJ_G0022102.1 mouse_genomes_project 16 35601245 35637182 + Hgd protein_coding processed_transcript MGP_WSBEiJ_T0043433.1 MGP_WSBEiJ_G0022102.1 mouse_genomes_project 16 35642757 35652917 + Hgd protein_coding processed_transcript MGP_WSBEiJ_T0010003.1 MGP_WSBEiJ_G0008160.1 mouse_genomes_project 16 93290901 93290969 + Gm28003 miRNA miRNA MGP_WSBEiJ_T0041958.1 MGP_WSBEiJ_G0021756.1 mouse_genomes_project 16 55819 56761 + MGP_WSBEiJ_P0041958 Olfr161 protein_coding protein_coding MGP_WSBEiJ_T0100591.1 MGP_WSBEiJ_G0039049.1 mouse_genomes_project 16 81412 82352 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0042965.1 MGP_WSBEiJ_G0021983.1 mouse_genomes_project 16 20420816 20439564 - MGP_WSBEiJ_P0042965 Rfc4 protein_coding protein_coding MGP_WSBEiJ_T0042966.1 MGP_WSBEiJ_G0021983.1 mouse_genomes_project 16 20420824 20439544 - MGP_WSBEiJ_P0042966 Rfc4 protein_coding protein_coding MGP_WSBEiJ_T0042967.1 MGP_WSBEiJ_G0021983.1 mouse_genomes_project 16 20420868 20421620 - Rfc4 protein_coding retained_intron MGP_WSBEiJ_T0042968.1 MGP_WSBEiJ_G0021983.1 mouse_genomes_project 16 20421582 20439518 - MGP_WSBEiJ_P0042968 Rfc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042969.1 MGP_WSBEiJ_G0021983.1 mouse_genomes_project 16 20431415 20439555 - MGP_WSBEiJ_P0042969 Rfc4 protein_coding protein_coding MGP_WSBEiJ_T0003580.1 MGP_WSBEiJ_G0003244.1 mouse_genomes_project 16 10556557 10564236 + Pla2g10os antisense antisense MGP_WSBEiJ_T0042383.1 MGP_WSBEiJ_G0021863.1 mouse_genomes_project 16 13076329 13090311 + MGP_WSBEiJ_P0042383 Pkp2 protein_coding protein_coding MGP_WSBEiJ_T0042384.1 MGP_WSBEiJ_G0021863.1 mouse_genomes_project 16 13076329 13111963 + MGP_WSBEiJ_P0042384 Pkp2 protein_coding protein_coding MGP_WSBEiJ_T0042385.1 MGP_WSBEiJ_G0021863.1 mouse_genomes_project 16 13076329 13136691 + MGP_WSBEiJ_P0042385 Pkp2 protein_coding protein_coding MGP_WSBEiJ_T0044153.1 MGP_WSBEiJ_G0022340.1 mouse_genomes_project 16 91474658 91509923 + MGP_WSBEiJ_P0044153 Ifnar2 protein_coding protein_coding MGP_WSBEiJ_T0044154.1 MGP_WSBEiJ_G0022340.1 mouse_genomes_project 16 91474716 91496501 + MGP_WSBEiJ_P0044154 Ifnar2 protein_coding protein_coding MGP_WSBEiJ_T0044155.1 MGP_WSBEiJ_G0022340.1 mouse_genomes_project 16 91474725 91496678 + MGP_WSBEiJ_P0044155 Ifnar2 protein_coding protein_coding MGP_WSBEiJ_T0044156.1 MGP_WSBEiJ_G0022340.1 mouse_genomes_project 16 91474774 91509705 + MGP_WSBEiJ_P0044156 Ifnar2 protein_coding protein_coding MGP_WSBEiJ_T0044157.1 MGP_WSBEiJ_G0022340.1 mouse_genomes_project 16 91490443 91494420 + MGP_WSBEiJ_P0044157 Ifnar2 protein_coding protein_coding MGP_WSBEiJ_T0003591.1 MGP_WSBEiJ_G0003254.1 mouse_genomes_project 16 30298618 30301593 - Tnk2os antisense antisense MGP_WSBEiJ_T0042076.1 MGP_WSBEiJ_G0021780.1 mouse_genomes_project 16 1230101 1262595 + MGP_WSBEiJ_P0042076 Hmox2 protein_coding protein_coding MGP_WSBEiJ_T0042077.1 MGP_WSBEiJ_G0021780.1 mouse_genomes_project 16 1230103 1264489 + MGP_WSBEiJ_P0042077 Hmox2 protein_coding protein_coding MGP_WSBEiJ_T0042078.1 MGP_WSBEiJ_G0021780.1 mouse_genomes_project 16 1245840 1263996 + MGP_WSBEiJ_P0042078 Hmox2 protein_coding protein_coding MGP_WSBEiJ_T0042080.1 MGP_WSBEiJ_G0021780.1 mouse_genomes_project 16 1254924 1262837 + MGP_WSBEiJ_P0042080 Hmox2 protein_coding protein_coding MGP_WSBEiJ_T0042081.1 MGP_WSBEiJ_G0021780.1 mouse_genomes_project 16 1254924 1263992 + MGP_WSBEiJ_P0042081 Hmox2 protein_coding protein_coding MGP_WSBEiJ_T0006749.1 MGP_WSBEiJ_G0005568.1 mouse_genomes_project 16 36513862 36515375 + D930030I03Rik lincRNA lincRNA MGP_WSBEiJ_T0042305.1 MGP_WSBEiJ_G0021842.1 mouse_genomes_project 16 10541807 10557165 - MGP_WSBEiJ_P0042305 Pla2g10 protein_coding protein_coding MGP_WSBEiJ_T0042306.1 MGP_WSBEiJ_G0021842.1 mouse_genomes_project 16 10541809 10557705 - MGP_WSBEiJ_P0042306 Pla2g10 protein_coding protein_coding MGP_WSBEiJ_T0042307.1 MGP_WSBEiJ_G0021842.1 mouse_genomes_project 16 10542144 10557441 - Pla2g10 protein_coding processed_transcript MGP_WSBEiJ_T0042308.1 MGP_WSBEiJ_G0021842.1 mouse_genomes_project 16 10551872 10557401 - Pla2g10 protein_coding processed_transcript MGP_WSBEiJ_T0042403.1 MGP_WSBEiJ_G0021867.1 mouse_genomes_project 16 13541407 13542549 - MGP_WSBEiJ_P0042403 Olfr19 protein_coding protein_coding MGP_WSBEiJ_T0042404.1 MGP_WSBEiJ_G0021867.1 mouse_genomes_project 16 13541866 13544937 - MGP_WSBEiJ_P0042404 Olfr19 protein_coding protein_coding MGP_WSBEiJ_T0009969.1 MGP_WSBEiJ_G0008126.1 mouse_genomes_project 16 20418175 20418281 + miRNA miRNA MGP_WSBEiJ_T0042226.1 MGP_WSBEiJ_G0021824.1 mouse_genomes_project 16 7577953 7578033 + MGP_WSBEiJ_P0042226 Gm11172 protein_coding protein_coding MGP_WSBEiJ_T0097974.1 MGP_WSBEiJ_G0036637.1 mouse_genomes_project 16 72724659 72724826 - Gm25699 snRNA snRNA MGP_WSBEiJ_T0006738.1 MGP_WSBEiJ_G0005557.1 mouse_genomes_project 16 19114914 19115770 - 2610020F03Rik lincRNA lincRNA MGP_WSBEiJ_T0016893.1 MGP_WSBEiJ_G0014731.1 mouse_genomes_project 16 1790175 1833576 + Gm15983 processed_transcript processed_transcript MGP_WSBEiJ_T0041992.1 MGP_WSBEiJ_G0021765.1 mouse_genomes_project 16 368220 384574 + MGP_WSBEiJ_P0041992 Cluap1 protein_coding protein_coding MGP_WSBEiJ_T0041993.1 MGP_WSBEiJ_G0021765.1 mouse_genomes_project 16 368244 403221 + MGP_WSBEiJ_P0041993 Cluap1 protein_coding protein_coding MGP_WSBEiJ_T0041994.1 MGP_WSBEiJ_G0021765.1 mouse_genomes_project 16 368458 372991 + Cluap1 protein_coding retained_intron MGP_WSBEiJ_T0041995.1 MGP_WSBEiJ_G0021765.1 mouse_genomes_project 16 368495 392044 + MGP_WSBEiJ_P0041995 Cluap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041996.1 MGP_WSBEiJ_G0021765.1 mouse_genomes_project 16 368525 384630 + MGP_WSBEiJ_P0041996 Cluap1 protein_coding protein_coding MGP_WSBEiJ_T0041997.1 MGP_WSBEiJ_G0021765.1 mouse_genomes_project 16 368551 404911 + MGP_WSBEiJ_P0041997 Cluap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043923.1 MGP_WSBEiJ_G0022250.1 mouse_genomes_project 16 68995470 69001687 - MGP_WSBEiJ_P0043923 protein_coding protein_coding MGP_WSBEiJ_T0097959.1 MGP_WSBEiJ_G0036622.1 mouse_genomes_project 16 34382714 34382817 + Gm25903 snRNA snRNA MGP_WSBEiJ_T0044158.1 MGP_WSBEiJ_G0022341.1 mouse_genomes_project 16 91494364 91524838 + MGP_WSBEiJ_P0044158 Gm21970 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044159.1 MGP_WSBEiJ_G0022341.1 mouse_genomes_project 16 91494364 91524838 + MGP_WSBEiJ_P0044159 Gm21970 protein_coding protein_coding MGP_WSBEiJ_T0043166.1 MGP_WSBEiJ_G0022041.1 mouse_genomes_project 16 30019463 30027655 + MGP_WSBEiJ_P0043166 Tm4sf19 protein_coding protein_coding MGP_WSBEiJ_T0043515.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41077335 41683172 + Zbtb20 protein_coding retained_intron MGP_WSBEiJ_T0043516.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41109920 41292518 + Zbtb20 protein_coding processed_transcript MGP_WSBEiJ_T0043517.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41110070 41790678 + Zbtb20 protein_coding processed_transcript MGP_WSBEiJ_T0043518.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41110173 41798497 + MGP_WSBEiJ_P0043518 Zbtb20 protein_coding protein_coding MGP_WSBEiJ_T0043519.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41110180 41683071 + Zbtb20 protein_coding retained_intron MGP_WSBEiJ_T0043520.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41451977 41831121 + MGP_WSBEiJ_P0043520 Zbtb20 protein_coding protein_coding MGP_WSBEiJ_T0043521.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41452136 41521194 + Zbtb20 protein_coding retained_intron MGP_WSBEiJ_T0043522.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41584602 41790658 + Zbtb20 protein_coding processed_transcript MGP_WSBEiJ_T0043523.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41585018 41799523 + Zbtb20 protein_coding retained_intron MGP_WSBEiJ_T0043524.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41585414 41831068 + MGP_WSBEiJ_P0043524 Zbtb20 protein_coding protein_coding MGP_WSBEiJ_T0043525.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41585745 41831075 + MGP_WSBEiJ_P0043525 Zbtb20 protein_coding protein_coding MGP_WSBEiJ_T0043526.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41725044 41797965 + MGP_WSBEiJ_P0043526 Zbtb20 protein_coding protein_coding MGP_WSBEiJ_T0043527.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41725052 41792660 + MGP_WSBEiJ_P0043527 Zbtb20 protein_coding protein_coding MGP_WSBEiJ_T0043528.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41725072 41831310 + MGP_WSBEiJ_P0043528 Zbtb20 protein_coding protein_coding MGP_WSBEiJ_T0043529.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41725127 41797946 + Zbtb20 protein_coding processed_transcript MGP_WSBEiJ_T0043530.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41729926 41790678 + Zbtb20 protein_coding processed_transcript MGP_WSBEiJ_T0043531.1 MGP_WSBEiJ_G0022127.1 mouse_genomes_project 16 41790461 41845518 + MGP_WSBEiJ_P0043531 Zbtb20 protein_coding protein_coding MGP_WSBEiJ_T0003614.1 MGP_WSBEiJ_G0003271.1 mouse_genomes_project 16 59319462 59325671 + Gm9017 antisense antisense MGP_WSBEiJ_T0003615.1 MGP_WSBEiJ_G0003271.1 mouse_genomes_project 16 59320451 59325950 + Gm9017 antisense antisense MGP_WSBEiJ_T0043906.1 MGP_WSBEiJ_G0022244.1 mouse_genomes_project 16 63688472 63695560 + MGP_WSBEiJ_P0043906 Cggbp1 protein_coding protein_coding MGP_WSBEiJ_T0043907.1 MGP_WSBEiJ_G0022244.1 mouse_genomes_project 16 63689178 63692463 + Cggbp1 protein_coding retained_intron MGP_WSBEiJ_T0100354.1 MGP_WSBEiJ_G0038832.1 mouse_genomes_project 16 17559166 17561217 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0097947.1 MGP_WSBEiJ_G0036610.1 mouse_genomes_project 16 20333240 20333346 + Gm23715 snRNA snRNA MGP_WSBEiJ_T0012856.1 MGP_WSBEiJ_G0010986.1 mouse_genomes_project 16 23152252 23153173 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044257.1 MGP_WSBEiJ_G0022357.1 mouse_genomes_project 16 92484352 92487029 - MGP_WSBEiJ_P0044257 4930563D23Rik protein_coding protein_coding MGP_WSBEiJ_T0000052.1 MGP_WSBEiJ_G0000042.1 mouse_genomes_project 16 35886 36352 + MGP_WSBEiJ_P0000052 Gm17472 IG_LV_gene IG_LV_gene MGP_WSBEiJ_T0043466.1 MGP_WSBEiJ_G0022115.1 mouse_genomes_project 16 36507287 36514569 - MGP_WSBEiJ_P0043466 Adprh protein_coding protein_coding MGP_WSBEiJ_T0044139.1 MGP_WSBEiJ_G0022335.1 mouse_genomes_project 16 91100445 91131923 - MGP_WSBEiJ_P0044139 Paxbp1 protein_coding protein_coding MGP_WSBEiJ_T0044140.1 MGP_WSBEiJ_G0022335.1 mouse_genomes_project 16 91101324 91131544 - MGP_WSBEiJ_P0044140 Paxbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044141.1 MGP_WSBEiJ_G0022335.1 mouse_genomes_project 16 91103256 91105635 - Paxbp1 protein_coding processed_transcript MGP_WSBEiJ_T0044142.1 MGP_WSBEiJ_G0022335.1 mouse_genomes_project 16 91111216 91118144 - Paxbp1 protein_coding retained_intron MGP_WSBEiJ_T0044143.1 MGP_WSBEiJ_G0022335.1 mouse_genomes_project 16 91111961 91117842 - MGP_WSBEiJ_P0044143 Paxbp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044144.1 MGP_WSBEiJ_G0022335.1 mouse_genomes_project 16 91112080 91114043 - Paxbp1 protein_coding retained_intron MGP_WSBEiJ_T0044145.1 MGP_WSBEiJ_G0022335.1 mouse_genomes_project 16 91117776 91122221 - Paxbp1 protein_coding retained_intron MGP_WSBEiJ_T0044146.1 MGP_WSBEiJ_G0022335.1 mouse_genomes_project 16 91118891 91131734 - Paxbp1 protein_coding processed_transcript MGP_WSBEiJ_T0043360.1 MGP_WSBEiJ_G0022091.1 mouse_genomes_project 16 34654823 34691437 + MGP_WSBEiJ_P0043360 Ildr1 protein_coding protein_coding MGP_WSBEiJ_T0043361.1 MGP_WSBEiJ_G0022091.1 mouse_genomes_project 16 34654875 34680955 + Ildr1 protein_coding retained_intron MGP_WSBEiJ_T0043362.1 MGP_WSBEiJ_G0022091.1 mouse_genomes_project 16 34655002 34690248 + MGP_WSBEiJ_P0043362 Ildr1 protein_coding protein_coding MGP_WSBEiJ_T0043363.1 MGP_WSBEiJ_G0022091.1 mouse_genomes_project 16 34679081 34686950 + Ildr1 protein_coding retained_intron MGP_WSBEiJ_T0043057.1 MGP_WSBEiJ_G0022013.1 mouse_genomes_project 16 27779324 27790435 - MGP_WSBEiJ_P0043057 Cpn2 protein_coding protein_coding MGP_WSBEiJ_T0042376.1 MGP_WSBEiJ_G0021859.1 mouse_genomes_project 16 12463967 12477426 - MGP_WSBEiJ_P0042376 Mcm4 protein_coding protein_coding MGP_WSBEiJ_T0006730.1 MGP_WSBEiJ_G0005551.1 mouse_genomes_project 16 13933826 13935418 + 1700056N10Rik lincRNA lincRNA MGP_WSBEiJ_T0011209.1 MGP_WSBEiJ_G0009366.1 mouse_genomes_project 16 39214708 39214859 - Gm27717 misc_RNA misc_RNA MGP_WSBEiJ_T0099215.1 MGP_WSBEiJ_G0037878.1 mouse_genomes_project 16 67494415 67494522 - Gm24681 snoRNA snoRNA MGP_WSBEiJ_T0043443.1 MGP_WSBEiJ_G0022106.1 mouse_genomes_project 16 35903831 35926613 + MGP_WSBEiJ_P0043443 Lrrc58 protein_coding protein_coding MGP_WSBEiJ_T0042283.1 MGP_WSBEiJ_G0021836.1 mouse_genomes_project 16 8810096 8821347 + Shisa9 protein_coding processed_transcript MGP_WSBEiJ_T0042284.1 MGP_WSBEiJ_G0021836.1 mouse_genomes_project 16 8810564 9100787 + MGP_WSBEiJ_P0042284 Shisa9 protein_coding protein_coding MGP_WSBEiJ_T0042285.1 MGP_WSBEiJ_G0021836.1 mouse_genomes_project 16 8810564 9101741 + MGP_WSBEiJ_P0042285 Shisa9 protein_coding protein_coding MGP_WSBEiJ_T0042286.1 MGP_WSBEiJ_G0021836.1 mouse_genomes_project 16 8810661 8816052 + Shisa9 protein_coding processed_transcript MGP_WSBEiJ_T0042093.1 MGP_WSBEiJ_G0021783.1 mouse_genomes_project 16 1382013 1388375 - MGP_WSBEiJ_P0042093 Ubald1 protein_coding protein_coding MGP_WSBEiJ_T0042094.1 MGP_WSBEiJ_G0021783.1 mouse_genomes_project 16 1382023 1387876 - Ubald1 protein_coding retained_intron MGP_WSBEiJ_T0042826.1 MGP_WSBEiJ_G0021954.1 mouse_genomes_project 16 17701947 17704020 - MGP_WSBEiJ_P0042826 Camk2n2 protein_coding protein_coding MGP_WSBEiJ_T0042223.1 MGP_WSBEiJ_G0021822.1 mouse_genomes_project 16 7555465 7556191 - MGP_WSBEiJ_P0042223 Prm2 protein_coding protein_coding MGP_WSBEiJ_T0042224.1 MGP_WSBEiJ_G0021822.1 mouse_genomes_project 16 7555622 7560220 - MGP_WSBEiJ_P0042224 Prm2 protein_coding protein_coding MGP_WSBEiJ_T0042351.1 MGP_WSBEiJ_G0021851.1 mouse_genomes_project 16 11062158 11161234 - MGP_WSBEiJ_P0042351 Myh11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042352.1 MGP_WSBEiJ_G0021851.1 mouse_genomes_project 16 11062159 11161278 - MGP_WSBEiJ_P0042352 Myh11 protein_coding protein_coding MGP_WSBEiJ_T0016899.1 MGP_WSBEiJ_G0014736.1 mouse_genomes_project 16 20491868 20544717 + B630019A10Rik processed_transcript processed_transcript MGP_WSBEiJ_T0042270.1 MGP_WSBEiJ_G0021833.1 mouse_genomes_project 16 8128173 8577594 + MGP_WSBEiJ_P0042270 Snx29 protein_coding protein_coding MGP_WSBEiJ_T0042271.1 MGP_WSBEiJ_G0021833.1 mouse_genomes_project 16 8128237 8214317 + MGP_WSBEiJ_P0042271 Snx29 protein_coding protein_coding MGP_WSBEiJ_T0042272.1 MGP_WSBEiJ_G0021833.1 mouse_genomes_project 16 8216128 8577594 + MGP_WSBEiJ_P0042272 Snx29 protein_coding protein_coding MGP_WSBEiJ_T0042273.1 MGP_WSBEiJ_G0021833.1 mouse_genomes_project 16 8217137 8486555 + MGP_WSBEiJ_P0042273 Snx29 protein_coding protein_coding MGP_WSBEiJ_T0042274.1 MGP_WSBEiJ_G0021833.1 mouse_genomes_project 16 8233298 8506769 + MGP_WSBEiJ_P0042274 Snx29 protein_coding protein_coding MGP_WSBEiJ_T0042275.1 MGP_WSBEiJ_G0021833.1 mouse_genomes_project 16 8257835 8454378 + Snx29 protein_coding retained_intron MGP_WSBEiJ_T0042276.1 MGP_WSBEiJ_G0021833.1 mouse_genomes_project 16 8259946 8486496 + Snx29 protein_coding retained_intron MGP_WSBEiJ_T0006784.1 MGP_WSBEiJ_G0005591.1 mouse_genomes_project 16 96184760 96186992 - 2810404F17Rik lincRNA lincRNA MGP_WSBEiJ_T0042984.1 MGP_WSBEiJ_G0021991.1 mouse_genomes_project 16 21296803 21302041 - MGP_WSBEiJ_P0042984 Rtp2 protein_coding protein_coding MGP_WSBEiJ_T0097295.1 MGP_WSBEiJ_G0035971.1 mouse_genomes_project 16 2544522 2568633 + 1700123O21Rik sense_intronic sense_intronic MGP_WSBEiJ_T0012883.1 MGP_WSBEiJ_G0011013.1 mouse_genomes_project 16 59856663 59856922 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043776.1 MGP_WSBEiJ_G0022189.1 mouse_genomes_project 16 54798942 54872258 + MGP_WSBEiJ_P0043776 Impg2 protein_coding protein_coding MGP_WSBEiJ_T0043777.1 MGP_WSBEiJ_G0022189.1 mouse_genomes_project 16 54798961 54811262 + Impg2 protein_coding processed_transcript MGP_WSBEiJ_T0043778.1 MGP_WSBEiJ_G0022189.1 mouse_genomes_project 16 54798967 54874865 + MGP_WSBEiJ_P0043778 Impg2 protein_coding protein_coding MGP_WSBEiJ_T0043779.1 MGP_WSBEiJ_G0022189.1 mouse_genomes_project 16 54871272 54872138 + Impg2 protein_coding processed_transcript MGP_WSBEiJ_T0009961.1 MGP_WSBEiJ_G0008118.1 mouse_genomes_project 16 15288009 15288074 - Mir185 miRNA miRNA MGP_WSBEiJ_T0009955.1 MGP_WSBEiJ_G0008112.1 mouse_genomes_project 16 11026665 11026732 + Mir484 miRNA miRNA MGP_WSBEiJ_T0042038.1 MGP_WSBEiJ_G0021772.1 mouse_genomes_project 16 962303 1008818 - MGP_WSBEiJ_P0042038 Srl protein_coding protein_coding MGP_WSBEiJ_T0042039.1 MGP_WSBEiJ_G0021772.1 mouse_genomes_project 16 962315 1008818 - MGP_WSBEiJ_P0042039 Srl protein_coding protein_coding MGP_WSBEiJ_T0042040.1 MGP_WSBEiJ_G0021772.1 mouse_genomes_project 16 969638 1030997 - Srl protein_coding processed_transcript MGP_WSBEiJ_T0042041.1 MGP_WSBEiJ_G0021772.1 mouse_genomes_project 16 975656 1008806 - Srl protein_coding retained_intron MGP_WSBEiJ_T0043652.1 MGP_WSBEiJ_G0022155.1 mouse_genomes_project 16 43927267 43955170 - MGP_WSBEiJ_P0043652 BC016579 protein_coding protein_coding MGP_WSBEiJ_T0096976.1 MGP_WSBEiJ_G0035657.1 mouse_genomes_project 16 1870594 1870716 - n-R5s30 rRNA rRNA MGP_WSBEiJ_T0042926.1 MGP_WSBEiJ_G0021974.1 mouse_genomes_project 16 20066563 20072766 - MGP_WSBEiJ_P0042926 Crygs protein_coding protein_coding MGP_WSBEiJ_T0009944.1 MGP_WSBEiJ_G0008101.1 mouse_genomes_project 16 388086 388174 + Gm23493 miRNA miRNA MGP_WSBEiJ_T0043465.1 MGP_WSBEiJ_G0022114.1 mouse_genomes_project 16 36457398 36495049 - MGP_WSBEiJ_P0043465 Pla1a protein_coding protein_coding MGP_WSBEiJ_T0044264.1 MGP_WSBEiJ_G0022361.1 mouse_genomes_project 16 92781555 93019788 - MGP_WSBEiJ_P0044264 Runx1 protein_coding protein_coding MGP_WSBEiJ_T0044265.1 MGP_WSBEiJ_G0022361.1 mouse_genomes_project 16 92783745 92878998 - MGP_WSBEiJ_P0044265 Runx1 protein_coding protein_coding MGP_WSBEiJ_T0044266.1 MGP_WSBEiJ_G0022361.1 mouse_genomes_project 16 92785493 92877794 - MGP_WSBEiJ_P0044266 Runx1 protein_coding protein_coding MGP_WSBEiJ_T0044267.1 MGP_WSBEiJ_G0022361.1 mouse_genomes_project 16 92868630 92877164 - MGP_WSBEiJ_P0044267 Runx1 protein_coding protein_coding MGP_WSBEiJ_T0044268.1 MGP_WSBEiJ_G0022361.1 mouse_genomes_project 16 92868663 92878995 - Runx1 protein_coding retained_intron MGP_WSBEiJ_T0044269.1 MGP_WSBEiJ_G0022361.1 mouse_genomes_project 16 92877260 93019418 - MGP_WSBEiJ_P0044269 Runx1 protein_coding protein_coding MGP_WSBEiJ_T0044270.1 MGP_WSBEiJ_G0022361.1 mouse_genomes_project 16 93009083 93019713 - MGP_WSBEiJ_P0044270 Runx1 protein_coding protein_coding MGP_WSBEiJ_T0043645.1 MGP_WSBEiJ_G0022152.1 mouse_genomes_project 16 43718967 43765191 - Gm609 protein_coding processed_transcript MGP_WSBEiJ_T0043646.1 MGP_WSBEiJ_G0022152.1 mouse_genomes_project 16 43724543 43798191 - MGP_WSBEiJ_P0043646 Gm609 protein_coding protein_coding MGP_WSBEiJ_T0043255.1 MGP_WSBEiJ_G0022058.1 mouse_genomes_project 16 30952932 31002021 + MGP_WSBEiJ_P0043255 Snx4 protein_coding protein_coding MGP_WSBEiJ_T0003609.1 MGP_WSBEiJ_G0003268.1 mouse_genomes_project 16 44263039 44289617 + Gm15638 antisense antisense MGP_WSBEiJ_T0003610.1 MGP_WSBEiJ_G0003268.1 mouse_genomes_project 16 44263046 44274677 + Gm15638 antisense antisense MGP_WSBEiJ_T0003611.1 MGP_WSBEiJ_G0003268.1 mouse_genomes_project 16 44263051 44266087 + Gm15638 antisense antisense MGP_WSBEiJ_T0043203.1 MGP_WSBEiJ_G0022049.1 mouse_genomes_project 16 30421051 30442140 - MGP_WSBEiJ_P0043203 Muc20 protein_coding protein_coding MGP_WSBEiJ_T0043206.1 MGP_WSBEiJ_G0022049.1 mouse_genomes_project 16 30430488 30442140 - MGP_WSBEiJ_P0043206 Muc20 protein_coding protein_coding MGP_WSBEiJ_T0044250.1 MGP_WSBEiJ_G0022354.1 mouse_genomes_project 16 92212318 92241478 + MGP_WSBEiJ_P0044250 Slc5a3 protein_coding protein_coding MGP_WSBEiJ_T0044251.1 MGP_WSBEiJ_G0022354.1 mouse_genomes_project 16 92232076 92237810 + MGP_WSBEiJ_P0044251 Slc5a3 protein_coding protein_coding MGP_WSBEiJ_T0044352.1 MGP_WSBEiJ_G0022375.1 mouse_genomes_project 16 95079354 95347889 - MGP_WSBEiJ_P0044352 Kcnj6 protein_coding protein_coding MGP_WSBEiJ_T0044353.1 MGP_WSBEiJ_G0022375.1 mouse_genomes_project 16 95091963 95347889 - MGP_WSBEiJ_P0044353 Kcnj6 protein_coding protein_coding MGP_WSBEiJ_T0044354.1 MGP_WSBEiJ_G0022375.1 mouse_genomes_project 16 95162441 95197726 - MGP_WSBEiJ_P0044354 Kcnj6 protein_coding protein_coding MGP_WSBEiJ_T0043176.1 MGP_WSBEiJ_G0022046.1 mouse_genomes_project 16 30232003 30255718 + MGP_WSBEiJ_P0043176 Tfrc protein_coding protein_coding MGP_WSBEiJ_T0043177.1 MGP_WSBEiJ_G0022046.1 mouse_genomes_project 16 30232066 30246627 + MGP_WSBEiJ_P0043177 Tfrc protein_coding protein_coding MGP_WSBEiJ_T0043178.1 MGP_WSBEiJ_G0022046.1 mouse_genomes_project 16 30232333 30236342 + MGP_WSBEiJ_P0043178 Tfrc protein_coding protein_coding MGP_WSBEiJ_T0043179.1 MGP_WSBEiJ_G0022046.1 mouse_genomes_project 16 30238340 30240265 + Tfrc protein_coding retained_intron MGP_WSBEiJ_T0043180.1 MGP_WSBEiJ_G0022046.1 mouse_genomes_project 16 30241386 30243989 + Tfrc protein_coding retained_intron MGP_WSBEiJ_T0043181.1 MGP_WSBEiJ_G0022046.1 mouse_genomes_project 16 30247327 30255714 + Tfrc protein_coding retained_intron MGP_WSBEiJ_T0043243.1 MGP_WSBEiJ_G0022055.1 mouse_genomes_project 16 30747980 30751713 + MGP_WSBEiJ_P0043243 Rpl35a protein_coding protein_coding MGP_WSBEiJ_T0043244.1 MGP_WSBEiJ_G0022055.1 mouse_genomes_project 16 30747993 30751700 + MGP_WSBEiJ_P0043244 Rpl35a protein_coding protein_coding MGP_WSBEiJ_T0043245.1 MGP_WSBEiJ_G0022055.1 mouse_genomes_project 16 30748009 30751699 + Rpl35a protein_coding retained_intron MGP_WSBEiJ_T0043246.1 MGP_WSBEiJ_G0022055.1 mouse_genomes_project 16 30748051 30749058 + Rpl35a protein_coding retained_intron MGP_WSBEiJ_T0043247.1 MGP_WSBEiJ_G0022055.1 mouse_genomes_project 16 30748054 30751689 + MGP_WSBEiJ_P0043247 Rpl35a protein_coding protein_coding MGP_WSBEiJ_T0043248.1 MGP_WSBEiJ_G0022055.1 mouse_genomes_project 16 30748333 30751699 + MGP_WSBEiJ_P0043248 Rpl35a protein_coding protein_coding MGP_WSBEiJ_T0043249.1 MGP_WSBEiJ_G0022055.1 mouse_genomes_project 16 30748545 30751680 + MGP_WSBEiJ_P0043249 Rpl35a protein_coding protein_coding MGP_WSBEiJ_T0043738.1 MGP_WSBEiJ_G0022180.1 mouse_genomes_project 16 53777598 53844314 - MGP_WSBEiJ_P0043738 Zpld1 protein_coding protein_coding MGP_WSBEiJ_T0043739.1 MGP_WSBEiJ_G0022180.1 mouse_genomes_project 16 53777598 53859206 - MGP_WSBEiJ_P0043739 Zpld1 protein_coding protein_coding MGP_WSBEiJ_T0097944.1 MGP_WSBEiJ_G0036607.1 mouse_genomes_project 16 17838384 17838549 + Gm22741 snRNA snRNA MGP_WSBEiJ_T0043471.1 MGP_WSBEiJ_G0022118.1 mouse_genomes_project 16 36590281 36616608 - MGP_WSBEiJ_P0043471 Poglut1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043472.1 MGP_WSBEiJ_G0022118.1 mouse_genomes_project 16 36590357 36616656 - MGP_WSBEiJ_P0043472 Poglut1 protein_coding protein_coding MGP_WSBEiJ_T0043473.1 MGP_WSBEiJ_G0022118.1 mouse_genomes_project 16 36590360 36616620 - Poglut1 protein_coding retained_intron MGP_WSBEiJ_T0043474.1 MGP_WSBEiJ_G0022118.1 mouse_genomes_project 16 36594650 36597740 - Poglut1 protein_coding retained_intron MGP_WSBEiJ_T0043475.1 MGP_WSBEiJ_G0022118.1 mouse_genomes_project 16 36599344 36603213 - Poglut1 protein_coding retained_intron MGP_WSBEiJ_T0043476.1 MGP_WSBEiJ_G0022118.1 mouse_genomes_project 16 36614417 36616620 - Poglut1 protein_coding retained_intron MGP_WSBEiJ_T0097943.1 MGP_WSBEiJ_G0036606.1 mouse_genomes_project 16 15318306 15318454 + Gm26170 snRNA snRNA MGP_WSBEiJ_T0096979.1 MGP_WSBEiJ_G0035660.1 mouse_genomes_project 16 12873222 12873332 - n-R5s31 rRNA rRNA MGP_WSBEiJ_T0097296.1 MGP_WSBEiJ_G0035972.1 mouse_genomes_project 16 11186439 11187651 - Gm15869 sense_intronic sense_intronic MGP_WSBEiJ_T0043599.1 MGP_WSBEiJ_G0022142.1 mouse_genomes_project 16 43007462 43017058 - MGP_WSBEiJ_P0043599 Gtpbp8 protein_coding protein_coding MGP_WSBEiJ_T0043600.1 MGP_WSBEiJ_G0022142.1 mouse_genomes_project 16 43009836 43017054 - MGP_WSBEiJ_P0043600 Gtpbp8 protein_coding protein_coding MGP_WSBEiJ_T0043601.1 MGP_WSBEiJ_G0022142.1 mouse_genomes_project 16 43009959 43016978 - MGP_WSBEiJ_P0043601 Gtpbp8 protein_coding protein_coding MGP_WSBEiJ_T0043602.1 MGP_WSBEiJ_G0022142.1 mouse_genomes_project 16 43014502 43017004 - MGP_WSBEiJ_P0043602 Gtpbp8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012825.1 MGP_WSBEiJ_G0010955.1 mouse_genomes_project 16 7831260 7831763 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012896.1 MGP_WSBEiJ_G0011026.1 mouse_genomes_project 16 94938154 94938365 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0042193.1 MGP_WSBEiJ_G0021814.1 mouse_genomes_project 16 7145076 7157553 + MGP_WSBEiJ_P0042193 Nubp1 protein_coding protein_coding MGP_WSBEiJ_T0042194.1 MGP_WSBEiJ_G0021814.1 mouse_genomes_project 16 7145077 7154794 + Nubp1 protein_coding processed_transcript MGP_WSBEiJ_T0042195.1 MGP_WSBEiJ_G0021814.1 mouse_genomes_project 16 7145082 7153673 + Nubp1 protein_coding retained_intron MGP_WSBEiJ_T0042196.1 MGP_WSBEiJ_G0021814.1 mouse_genomes_project 16 7145098 7157553 + Nubp1 protein_coding retained_intron MGP_WSBEiJ_T0042197.1 MGP_WSBEiJ_G0021814.1 mouse_genomes_project 16 7145192 7154559 + Nubp1 protein_coding retained_intron MGP_WSBEiJ_T0042199.1 MGP_WSBEiJ_G0021814.1 mouse_genomes_project 16 7154357 7156471 + Nubp1 protein_coding processed_transcript MGP_WSBEiJ_T0003599.1 MGP_WSBEiJ_G0003260.1 mouse_genomes_project 16 33789064 33806656 - Gm15564 antisense antisense MGP_WSBEiJ_T0003600.1 MGP_WSBEiJ_G0003260.1 mouse_genomes_project 16 33789065 33808594 - Gm15564 antisense antisense MGP_WSBEiJ_T0003601.1 MGP_WSBEiJ_G0003260.1 mouse_genomes_project 16 33789087 33806716 - Gm15564 antisense antisense MGP_WSBEiJ_T0003619.1 MGP_WSBEiJ_G0003274.1 mouse_genomes_project 16 92066623 92070821 + Gm15976 antisense antisense MGP_WSBEiJ_T0042379.1 MGP_WSBEiJ_G0021861.1 mouse_genomes_project 16 12698805 12715346 - MGP_WSBEiJ_P0042379 Mzt2 protein_coding protein_coding MGP_WSBEiJ_T0042380.1 MGP_WSBEiJ_G0021861.1 mouse_genomes_project 16 12698807 12714721 - Mzt2 protein_coding retained_intron MGP_WSBEiJ_T0042381.1 MGP_WSBEiJ_G0021861.1 mouse_genomes_project 16 12698814 12715368 - MGP_WSBEiJ_P0042381 Mzt2 protein_coding protein_coding MGP_WSBEiJ_T0044438.1 MGP_WSBEiJ_G0022388.1 mouse_genomes_project 16 96889804 96951997 + MGP_WSBEiJ_P0044438 Pcp4 protein_coding protein_coding MGP_WSBEiJ_T0044051.1 MGP_WSBEiJ_G0022295.1 mouse_genomes_project 16 88768854 88769719 - MGP_WSBEiJ_P0044051 2310057N15Rik protein_coding protein_coding MGP_WSBEiJ_T0042133.1 MGP_WSBEiJ_G0021798.1 mouse_genomes_project 16 1779034 1791373 - MGP_WSBEiJ_P0042133 Eef2kmt protein_coding protein_coding MGP_WSBEiJ_T0042134.1 MGP_WSBEiJ_G0021798.1 mouse_genomes_project 16 1779761 1791331 - Eef2kmt protein_coding retained_intron MGP_WSBEiJ_T0042135.1 MGP_WSBEiJ_G0021798.1 mouse_genomes_project 16 1782761 1791346 - MGP_WSBEiJ_P0042135 Eef2kmt protein_coding protein_coding MGP_WSBEiJ_T0042136.1 MGP_WSBEiJ_G0021798.1 mouse_genomes_project 16 1782773 1784257 - Eef2kmt protein_coding retained_intron MGP_WSBEiJ_T0042137.1 MGP_WSBEiJ_G0021798.1 mouse_genomes_project 16 1784461 1791319 - Eef2kmt protein_coding retained_intron MGP_WSBEiJ_T0043703.1 MGP_WSBEiJ_G0022172.1 mouse_genomes_project 16 47349036 47374549 + MGP_WSBEiJ_P0043703 C330027C09Rik protein_coding protein_coding MGP_WSBEiJ_T0043704.1 MGP_WSBEiJ_G0022172.1 mouse_genomes_project 16 47349039 47374549 + MGP_WSBEiJ_P0043704 C330027C09Rik protein_coding protein_coding MGP_WSBEiJ_T0043705.1 MGP_WSBEiJ_G0022172.1 mouse_genomes_project 16 47349074 47355916 + MGP_WSBEiJ_P0043705 C330027C09Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043706.1 MGP_WSBEiJ_G0022172.1 mouse_genomes_project 16 47355694 47356893 + C330027C09Rik protein_coding retained_intron MGP_WSBEiJ_T0043707.1 MGP_WSBEiJ_G0022172.1 mouse_genomes_project 16 47363249 47374495 + C330027C09Rik protein_coding retained_intron MGP_WSBEiJ_T0043708.1 MGP_WSBEiJ_G0022172.1 mouse_genomes_project 16 47365276 47368141 + C330027C09Rik protein_coding retained_intron MGP_WSBEiJ_T0043709.1 MGP_WSBEiJ_G0022172.1 mouse_genomes_project 16 47368145 47369200 + C330027C09Rik protein_coding retained_intron MGP_WSBEiJ_T0043710.1 MGP_WSBEiJ_G0022172.1 mouse_genomes_project 16 47370687 47374553 + C330027C09Rik protein_coding retained_intron MGP_WSBEiJ_T0043964.1 MGP_WSBEiJ_G0022262.1 mouse_genomes_project 16 77824032 77866360 + MGP_WSBEiJ_P0043964 Cxadr protein_coding protein_coding MGP_WSBEiJ_T0043965.1 MGP_WSBEiJ_G0022262.1 mouse_genomes_project 16 77824328 77878242 + MGP_WSBEiJ_P0043965 Cxadr protein_coding protein_coding MGP_WSBEiJ_T0042277.1 MGP_WSBEiJ_G0021834.1 mouse_genomes_project 16 8627580 8734566 - MGP_WSBEiJ_P0042277 Cpped1 protein_coding protein_coding MGP_WSBEiJ_T0042278.1 MGP_WSBEiJ_G0021834.1 mouse_genomes_project 16 8627586 8734565 - MGP_WSBEiJ_P0042278 Cpped1 protein_coding protein_coding MGP_WSBEiJ_T0042279.1 MGP_WSBEiJ_G0021834.1 mouse_genomes_project 16 8654649 8734539 - Cpped1 protein_coding retained_intron MGP_WSBEiJ_T0042280.1 MGP_WSBEiJ_G0021834.1 mouse_genomes_project 16 8655638 8734541 - MGP_WSBEiJ_P0042280 Cpped1 protein_coding protein_coding MGP_WSBEiJ_T0042281.1 MGP_WSBEiJ_G0021834.1 mouse_genomes_project 16 8706800 8734588 - MGP_WSBEiJ_P0042281 Cpped1 protein_coding protein_coding MGP_WSBEiJ_T0043122.1 MGP_WSBEiJ_G0022028.1 mouse_genomes_project 16 29528126 29529571 - MGP_WSBEiJ_P0043122 0610012G03Rik protein_coding protein_coding MGP_WSBEiJ_T0042372.1 MGP_WSBEiJ_G0021858.1 mouse_genomes_project 16 12387355 12432017 - MGP_WSBEiJ_P0042372 protein_coding protein_coding MGP_WSBEiJ_T0042373.1 MGP_WSBEiJ_G0021858.1 mouse_genomes_project 16 12390194 12432000 - MGP_WSBEiJ_P0042373 protein_coding protein_coding MGP_WSBEiJ_T0042374.1 MGP_WSBEiJ_G0021858.1 mouse_genomes_project 16 12391488 12431965 - MGP_WSBEiJ_P0042374 protein_coding protein_coding MGP_WSBEiJ_T0042375.1 MGP_WSBEiJ_G0021858.1 mouse_genomes_project 16 12391916 12431983 - MGP_WSBEiJ_P0042375 protein_coding protein_coding MGP_WSBEiJ_T0043751.1 MGP_WSBEiJ_G0022185.1 mouse_genomes_project 16 54553566 54589263 + MGP_WSBEiJ_P0043751 Zbtb11 protein_coding protein_coding MGP_WSBEiJ_T0043752.1 MGP_WSBEiJ_G0022185.1 mouse_genomes_project 16 54568610 54571766 + Zbtb11 protein_coding retained_intron MGP_WSBEiJ_T0043753.1 MGP_WSBEiJ_G0022185.1 mouse_genomes_project 16 54585542 54589263 + Zbtb11 protein_coding retained_intron MGP_WSBEiJ_T0044262.1 MGP_WSBEiJ_G0022360.1 mouse_genomes_project 16 92659877 92704457 + MGP_WSBEiJ_P0044262 Clic6 protein_coding protein_coding MGP_WSBEiJ_T0044263.1 MGP_WSBEiJ_G0022360.1 mouse_genomes_project 16 92674311 92718074 + MGP_WSBEiJ_P0044263 Clic6 protein_coding protein_coding MGP_WSBEiJ_T0097975.1 MGP_WSBEiJ_G0036638.1 mouse_genomes_project 16 78146869 78146976 + Gm24861 snRNA snRNA MGP_WSBEiJ_T0042204.1 MGP_WSBEiJ_G0021816.1 mouse_genomes_project 16 7225696 7274811 + MGP_WSBEiJ_P0042204 Ciita protein_coding unknown_likely_coding MGP_WSBEiJ_T0042205.1 MGP_WSBEiJ_G0021816.1 mouse_genomes_project 16 7234225 7277133 + MGP_WSBEiJ_P0042205 Ciita protein_coding protein_coding MGP_WSBEiJ_T0097946.1 MGP_WSBEiJ_G0036609.1 mouse_genomes_project 16 19450400 19450508 + Gm25810 snRNA snRNA MGP_WSBEiJ_T0044463.1 MGP_WSBEiJ_G0022397.1 mouse_genomes_project 16 98451848 98467025 - MGP_WSBEiJ_P0044463 Zbtb21 protein_coding protein_coding MGP_WSBEiJ_T0044464.1 MGP_WSBEiJ_G0022397.1 mouse_genomes_project 16 98451848 98467025 - MGP_WSBEiJ_P0044464 Zbtb21 protein_coding protein_coding MGP_WSBEiJ_T0044465.1 MGP_WSBEiJ_G0022397.1 mouse_genomes_project 16 98451848 98467025 - MGP_WSBEiJ_P0044465 Zbtb21 protein_coding protein_coding MGP_WSBEiJ_T0097951.1 MGP_WSBEiJ_G0036614.1 mouse_genomes_project 16 28360586 28360693 + Gm26295 snRNA snRNA MGP_WSBEiJ_T0043697.1 MGP_WSBEiJ_G0022171.1 mouse_genomes_project 16 47273356 47288117 - Dzip3 protein_coding retained_intron MGP_WSBEiJ_T0043698.1 MGP_WSBEiJ_G0022171.1 mouse_genomes_project 16 47273356 47349017 - MGP_WSBEiJ_P0043698 Dzip3 protein_coding protein_coding MGP_WSBEiJ_T0043699.1 MGP_WSBEiJ_G0022171.1 mouse_genomes_project 16 47273358 47288025 - Dzip3 protein_coding retained_intron MGP_WSBEiJ_T0043700.1 MGP_WSBEiJ_G0022171.1 mouse_genomes_project 16 47275003 47348793 - MGP_WSBEiJ_P0043700 Dzip3 protein_coding protein_coding MGP_WSBEiJ_T0043701.1 MGP_WSBEiJ_G0022171.1 mouse_genomes_project 16 47275990 47278865 - MGP_WSBEiJ_P0043701 Dzip3 protein_coding protein_coding MGP_WSBEiJ_T0043702.1 MGP_WSBEiJ_G0022171.1 mouse_genomes_project 16 47276210 47280411 - Dzip3 protein_coding retained_intron MGP_WSBEiJ_T0009976.1 MGP_WSBEiJ_G0008133.1 mouse_genomes_project 16 34751725 34751800 + Gm22617 miRNA miRNA MGP_WSBEiJ_T0042882.1 MGP_WSBEiJ_G0021962.1 mouse_genomes_project 16 18373081 18391677 + MGP_WSBEiJ_P0042882 Ephb3 protein_coding protein_coding MGP_WSBEiJ_T0042883.1 MGP_WSBEiJ_G0021962.1 mouse_genomes_project 16 18379440 18391346 + MGP_WSBEiJ_P0042883 Ephb3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042884.1 MGP_WSBEiJ_G0021962.1 mouse_genomes_project 16 18385186 18391678 + Ephb3 protein_coding retained_intron MGP_WSBEiJ_T0042885.1 MGP_WSBEiJ_G0021962.1 mouse_genomes_project 16 18390063 18391066 + Ephb3 protein_coding retained_intron MGP_WSBEiJ_T0044446.1 MGP_WSBEiJ_G0022392.1 mouse_genomes_project 16 97960313 97965522 - Fam3b protein_coding processed_transcript MGP_WSBEiJ_T0044447.1 MGP_WSBEiJ_G0022392.1 mouse_genomes_project 16 97960347 97995427 - MGP_WSBEiJ_P0044447 Fam3b protein_coding protein_coding MGP_WSBEiJ_T0043307.1 MGP_WSBEiJ_G0022072.1 mouse_genomes_project 16 33186168 33279073 - MGP_WSBEiJ_P0043307 Pdia5 protein_coding protein_coding MGP_WSBEiJ_T0043632.1 MGP_WSBEiJ_G0022150.1 mouse_genomes_project 16 43516935 43546101 + MGP_WSBEiJ_P0043632 Btla protein_coding protein_coding MGP_WSBEiJ_T0043633.1 MGP_WSBEiJ_G0022150.1 mouse_genomes_project 16 43516957 43546104 + MGP_WSBEiJ_P0043633 Btla protein_coding protein_coding MGP_WSBEiJ_T0000042.1 MGP_WSBEiJ_G0000035.1 mouse_genomes_project 16 16238994 16239032 - MGP_WSBEiJ_P0000042 Iglj2 IG_J_gene IG_J_gene MGP_WSBEiJ_T0012842.1 MGP_WSBEiJ_G0010972.1 mouse_genomes_project 16 14628236 14628674 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044103.1 MGP_WSBEiJ_G0022328.1 mouse_genomes_project 16 90432391 90556719 + MGP_WSBEiJ_P0044103 Hunk protein_coding protein_coding MGP_WSBEiJ_T0042370.1 MGP_WSBEiJ_G0021856.1 mouse_genomes_project 16 11574036 11577598 + MGP_WSBEiJ_P0042370 Snai2 protein_coding protein_coding MGP_WSBEiJ_T0016904.1 MGP_WSBEiJ_G0014739.1 mouse_genomes_project 16 40939367 41077042 - 4932412D23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016905.1 MGP_WSBEiJ_G0014739.1 mouse_genomes_project 16 41010755 41077217 - 4932412D23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016906.1 MGP_WSBEiJ_G0014739.1 mouse_genomes_project 16 41011167 41077195 - 4932412D23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016907.1 MGP_WSBEiJ_G0014739.1 mouse_genomes_project 16 41011319 41077201 - 4932412D23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0043494.1 MGP_WSBEiJ_G0022121.1 mouse_genomes_project 16 36813736 36841689 + MGP_WSBEiJ_P0043494 B4galt4 protein_coding protein_coding MGP_WSBEiJ_T0043495.1 MGP_WSBEiJ_G0022121.1 mouse_genomes_project 16 36813780 36841683 + MGP_WSBEiJ_P0043495 B4galt4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043496.1 MGP_WSBEiJ_G0022121.1 mouse_genomes_project 16 36833618 36841146 + MGP_WSBEiJ_P0043496 B4galt4 protein_coding protein_coding MGP_WSBEiJ_T0043497.1 MGP_WSBEiJ_G0022121.1 mouse_genomes_project 16 36835706 36839115 + B4galt4 protein_coding retained_intron MGP_WSBEiJ_T0043862.1 MGP_WSBEiJ_G0022223.1 mouse_genomes_project 16 57812322 57813252 - MGP_WSBEiJ_P0043862 Olfr196 protein_coding protein_coding MGP_WSBEiJ_T0012871.1 MGP_WSBEiJ_G0011001.1 mouse_genomes_project 16 38035461 38036459 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097978.1 MGP_WSBEiJ_G0036641.1 mouse_genomes_project 16 88590402 88590486 - Gm23587 snRNA snRNA MGP_WSBEiJ_T0099219.1 MGP_WSBEiJ_G0037882.1 mouse_genomes_project 16 75553836 75553967 - Gm22268 snoRNA snoRNA MGP_WSBEiJ_T0043866.1 MGP_WSBEiJ_G0022227.1 mouse_genomes_project 16 57944457 57945381 - MGP_WSBEiJ_P0043866 Olfr202 protein_coding protein_coding MGP_WSBEiJ_T0003592.1 MGP_WSBEiJ_G0003255.1 mouse_genomes_project 16 30455923 30459640 + Gm26769 antisense antisense MGP_WSBEiJ_T0099180.1 MGP_WSBEiJ_G0037843.1 mouse_genomes_project 16 5019422 5019582 + Gm24579 snoRNA snoRNA MGP_WSBEiJ_T0009993.1 MGP_WSBEiJ_G0008150.1 mouse_genomes_project 16 73686933 73687011 - Mir691 miRNA miRNA MGP_WSBEiJ_T0043692.1 MGP_WSBEiJ_G0022166.1 mouse_genomes_project 16 46770160 46966360 + MGP_WSBEiJ_P0043692 Morc1 protein_coding protein_coding MGP_WSBEiJ_T0006745.1 MGP_WSBEiJ_G0005564.1 mouse_genomes_project 16 27716691 27721629 - Gm26562 lincRNA lincRNA MGP_WSBEiJ_T0043809.1 MGP_WSBEiJ_G0022202.1 mouse_genomes_project 16 57016288 57078554 + MGP_WSBEiJ_P0043809 Dcbld2 protein_coding protein_coding MGP_WSBEiJ_T0043810.1 MGP_WSBEiJ_G0022202.1 mouse_genomes_project 16 57064064 57074204 + Dcbld2 protein_coding processed_transcript MGP_WSBEiJ_T0043811.1 MGP_WSBEiJ_G0022202.1 mouse_genomes_project 16 57064704 57065421 + Dcbld2 protein_coding processed_transcript MGP_WSBEiJ_T0043812.1 MGP_WSBEiJ_G0022202.1 mouse_genomes_project 16 57065251 57072647 + Dcbld2 protein_coding retained_intron MGP_WSBEiJ_T0043813.1 MGP_WSBEiJ_G0022202.1 mouse_genomes_project 16 57069063 57074653 + Dcbld2 protein_coding processed_transcript MGP_WSBEiJ_T0043814.1 MGP_WSBEiJ_G0022202.1 mouse_genomes_project 16 57069107 57075550 + Dcbld2 protein_coding retained_intron MGP_WSBEiJ_T0043815.1 MGP_WSBEiJ_G0022202.1 mouse_genomes_project 16 57069109 57075613 + Dcbld2 protein_coding retained_intron MGP_WSBEiJ_T0043044.1 MGP_WSBEiJ_G0022010.1 mouse_genomes_project 16 27038313 27113477 + MGP_WSBEiJ_P0043044 Opa1 protein_coding protein_coding MGP_WSBEiJ_T0043045.1 MGP_WSBEiJ_G0022010.1 mouse_genomes_project 16 27038357 27071767 + Opa1 protein_coding retained_intron MGP_WSBEiJ_T0043046.1 MGP_WSBEiJ_G0022010.1 mouse_genomes_project 16 27038359 27110469 + MGP_WSBEiJ_P0043046 Opa1 protein_coding protein_coding MGP_WSBEiJ_T0043047.1 MGP_WSBEiJ_G0022010.1 mouse_genomes_project 16 27038359 27106783 + MGP_WSBEiJ_P0043047 Opa1 protein_coding protein_coding MGP_WSBEiJ_T0043048.1 MGP_WSBEiJ_G0022010.1 mouse_genomes_project 16 27038359 27087959 + MGP_WSBEiJ_P0043048 Opa1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043049.1 MGP_WSBEiJ_G0022010.1 mouse_genomes_project 16 27038371 27110472 + Opa1 protein_coding retained_intron MGP_WSBEiJ_T0043050.1 MGP_WSBEiJ_G0022010.1 mouse_genomes_project 16 27044335 27068049 + MGP_WSBEiJ_P0043050 Opa1 protein_coding protein_coding MGP_WSBEiJ_T0043051.1 MGP_WSBEiJ_G0022010.1 mouse_genomes_project 16 27073767 27076420 + Opa1 protein_coding retained_intron MGP_WSBEiJ_T0044052.1 MGP_WSBEiJ_G0022296.1 mouse_genomes_project 16 88774425 88775218 + MGP_WSBEiJ_P0044052 Gm5965 protein_coding protein_coding MGP_WSBEiJ_T0100033.1 MGP_WSBEiJ_G0038663.1 mouse_genomes_project 16 58672710 58672875 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0043217.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30534592 30548458 + Fyttd1 protein_coding processed_transcript MGP_WSBEiJ_T0043218.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30534873 30568739 + MGP_WSBEiJ_P0043218 Fyttd1 protein_coding protein_coding MGP_WSBEiJ_T0043219.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30534876 30568827 + MGP_WSBEiJ_P0043219 Fyttd1 protein_coding protein_coding MGP_WSBEiJ_T0043220.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30534905 30552305 + Fyttd1 protein_coding retained_intron MGP_WSBEiJ_T0043221.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30534905 30554299 + Fyttd1 protein_coding processed_transcript MGP_WSBEiJ_T0043222.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30534943 30555900 + Fyttd1 protein_coding retained_intron MGP_WSBEiJ_T0043223.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30540073 30565494 + MGP_WSBEiJ_P0043223 Fyttd1 protein_coding protein_coding MGP_WSBEiJ_T0043224.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30552139 30565643 + Fyttd1 protein_coding processed_transcript MGP_WSBEiJ_T0043225.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30555798 30565566 + Fyttd1 protein_coding retained_intron MGP_WSBEiJ_T0043226.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30557272 30565502 + Fyttd1 protein_coding retained_intron MGP_WSBEiJ_T0043227.1 MGP_WSBEiJ_G0022052.1 mouse_genomes_project 16 30559147 30565468 + Fyttd1 protein_coding retained_intron MGP_WSBEiJ_T0042483.1 MGP_WSBEiJ_G0021881.1 mouse_genomes_project 16 14137123 14166848 + MGP_WSBEiJ_P0042483 Hic2 protein_coding protein_coding MGP_WSBEiJ_T0042484.1 MGP_WSBEiJ_G0021881.1 mouse_genomes_project 16 14137215 14165011 + MGP_WSBEiJ_P0042484 Hic2 protein_coding protein_coding MGP_WSBEiJ_T0042099.1 MGP_WSBEiJ_G0021787.1 mouse_genomes_project 16 1480083 1493370 + MGP_WSBEiJ_P0042099 protein_coding protein_coding MGP_WSBEiJ_T0003605.1 MGP_WSBEiJ_G0003264.1 mouse_genomes_project 16 36906402 36906739 + antisense antisense MGP_WSBEiJ_T0010005.1 MGP_WSBEiJ_G0008162.1 mouse_genomes_project 16 94467348 94467458 - Gm23062 miRNA miRNA MGP_WSBEiJ_T0000938.1 MGP_WSBEiJ_G0000874.1 mouse_genomes_project 16 76950912 76954376 + TEC TEC MGP_WSBEiJ_T0044077.1 MGP_WSBEiJ_G0022317.1 mouse_genomes_project 16 89172207 89172366 + MGP_WSBEiJ_P0044077 Gm7735 protein_coding protein_coding MGP_WSBEiJ_T0042243.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7934709 7974897 - MGP_WSBEiJ_P0042243 Zc3h7a protein_coding protein_coding MGP_WSBEiJ_T0042244.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7935243 7939008 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042245.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7937160 7940029 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042246.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7938831 7946162 - MGP_WSBEiJ_P0042246 Zc3h7a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042247.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7938925 7974845 - MGP_WSBEiJ_P0042247 Zc3h7a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042248.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7942825 7974604 - MGP_WSBEiJ_P0042248 Zc3h7a protein_coding protein_coding MGP_WSBEiJ_T0042249.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7943011 7945010 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042250.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7945011 7949050 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042251.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7946164 7973477 - MGP_WSBEiJ_P0042251 Zc3h7a protein_coding protein_coding MGP_WSBEiJ_T0042252.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7947928 7948859 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042253.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7948920 7950380 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042254.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7949308 7954480 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042255.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7950646 7956893 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042256.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7952602 7956915 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0042257.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7954931 7973444 - MGP_WSBEiJ_P0042257 Zc3h7a protein_coding protein_coding MGP_WSBEiJ_T0042258.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7959186 7974069 - MGP_WSBEiJ_P0042258 Zc3h7a protein_coding protein_coding MGP_WSBEiJ_T0042259.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7959196 7974568 - MGP_WSBEiJ_P0042259 Zc3h7a protein_coding protein_coding MGP_WSBEiJ_T0042260.1 MGP_WSBEiJ_G0021829.1 mouse_genomes_project 16 7961466 7974846 - Zc3h7a protein_coding retained_intron MGP_WSBEiJ_T0043688.1 MGP_WSBEiJ_G0022163.1 mouse_genomes_project 16 46386566 46389688 + MGP_WSBEiJ_P0043688 Gm7275 protein_coding protein_coding MGP_WSBEiJ_T0042482.1 MGP_WSBEiJ_G0021880.1 mouse_genomes_project 16 14110384 14116171 + MGP_WSBEiJ_P0042482 Rimbp3 protein_coding protein_coding MGP_WSBEiJ_T0042760.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17340213 17364223 - MGP_WSBEiJ_P0042760 Parl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042761.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17340213 17364265 - MGP_WSBEiJ_P0042761 Parl protein_coding protein_coding MGP_WSBEiJ_T0042762.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17340396 17343638 - Parl protein_coding retained_intron MGP_WSBEiJ_T0042763.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17343137 17364218 - Parl protein_coding retained_intron MGP_WSBEiJ_T0042764.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17345921 17348633 - Parl protein_coding retained_intron MGP_WSBEiJ_T0042765.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17347322 17363207 - Parl protein_coding processed_transcript MGP_WSBEiJ_T0042766.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17347348 17364232 - MGP_WSBEiJ_P0042766 Parl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042767.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17354797 17360043 - Parl protein_coding retained_intron MGP_WSBEiJ_T0042768.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17359474 17363691 - Parl protein_coding processed_transcript MGP_WSBEiJ_T0042769.1 MGP_WSBEiJ_G0021944.1 mouse_genomes_project 16 17360001 17364239 - Parl protein_coding retained_intron MGP_WSBEiJ_T0043570.1 MGP_WSBEiJ_G0022137.1 mouse_genomes_project 16 42476124 42578290 - MGP_WSBEiJ_P0043570 Sidt1 protein_coding protein_coding MGP_WSBEiJ_T0043571.1 MGP_WSBEiJ_G0022137.1 mouse_genomes_project 16 42477581 42577827 - MGP_WSBEiJ_P0043571 Sidt1 protein_coding protein_coding MGP_WSBEiJ_T0043572.1 MGP_WSBEiJ_G0022137.1 mouse_genomes_project 16 42511482 42519989 - Sidt1 protein_coding retained_intron MGP_WSBEiJ_T0043573.1 MGP_WSBEiJ_G0022137.1 mouse_genomes_project 16 42519548 42520658 - MGP_WSBEiJ_P0043573 Sidt1 protein_coding protein_coding MGP_WSBEiJ_T0043574.1 MGP_WSBEiJ_G0022137.1 mouse_genomes_project 16 42522395 42577840 - Sidt1 protein_coding processed_transcript MGP_WSBEiJ_T0042704.1 MGP_WSBEiJ_G0021922.1 mouse_genomes_project 16 15600560 15608687 - MGP_WSBEiJ_P0042704 Sept5 protein_coding protein_coding MGP_WSBEiJ_T0042705.1 MGP_WSBEiJ_G0021922.1 mouse_genomes_project 16 15601489 15604918 - MGP_WSBEiJ_P0042705 Sept5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012840.1 MGP_WSBEiJ_G0010970.1 mouse_genomes_project 16 13715679 13715929 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043513.1 MGP_WSBEiJ_G0022126.1 mouse_genomes_project 16 40437647 40534387 - MGP_WSBEiJ_P0043513 Gap43 protein_coding protein_coding MGP_WSBEiJ_T0043514.1 MGP_WSBEiJ_G0022126.1 mouse_genomes_project 16 40437663 40468616 - Gap43 protein_coding processed_transcript MGP_WSBEiJ_T0043268.1 MGP_WSBEiJ_G0022063.1 mouse_genomes_project 16 31570990 31693334 + MGP_WSBEiJ_P0043268 Itgb5 protein_coding protein_coding MGP_WSBEiJ_T0043269.1 MGP_WSBEiJ_G0022063.1 mouse_genomes_project 16 31571002 31693341 + MGP_WSBEiJ_P0043269 Itgb5 protein_coding protein_coding MGP_WSBEiJ_T0043270.1 MGP_WSBEiJ_G0022063.1 mouse_genomes_project 16 31626533 31653739 + Itgb5 protein_coding processed_transcript MGP_WSBEiJ_T0043271.1 MGP_WSBEiJ_G0022063.1 mouse_genomes_project 16 31633349 31642818 + Itgb5 protein_coding processed_transcript MGP_WSBEiJ_T0000932.1 MGP_WSBEiJ_G0000869.1 mouse_genomes_project 16 76852649 76853301 + TEC TEC MGP_WSBEiJ_T0009959.1 MGP_WSBEiJ_G0008116.1 mouse_genomes_project 16 15234837 15234916 - Mir1306 miRNA miRNA MGP_WSBEiJ_T0000139.1 MGP_WSBEiJ_G0000105.1 mouse_genomes_project 16 16117245 16117729 - MGP_WSBEiJ_P0000139 Iglv1 IG_V_gene IG_V_gene MGP_WSBEiJ_T0096982.1 MGP_WSBEiJ_G0035663.1 mouse_genomes_project 16 35885641 35885757 + n-R5s34 rRNA rRNA MGP_WSBEiJ_T0042927.1 MGP_WSBEiJ_G0021975.1 mouse_genomes_project 16 20074619 20123487 - MGP_WSBEiJ_P0042927 Tbccd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042339.1 MGP_WSBEiJ_G0021847.1 mouse_genomes_project 16 10843652 10849693 - MGP_WSBEiJ_P0042339 Ifitm7 protein_coding protein_coding MGP_WSBEiJ_T0042340.1 MGP_WSBEiJ_G0021847.1 mouse_genomes_project 16 10844749 10846544 - MGP_WSBEiJ_P0042340 Ifitm7 protein_coding protein_coding MGP_WSBEiJ_T0042743.1 MGP_WSBEiJ_G0021937.1 mouse_genomes_project 16 16712334 16764585 - MGP_WSBEiJ_P0042743 Lamp3 protein_coding protein_coding MGP_WSBEiJ_T0043014.1 MGP_WSBEiJ_G0022001.1 mouse_genomes_project 16 24398936 24433235 - MGP_WSBEiJ_P0043014 Gmnc protein_coding protein_coding MGP_WSBEiJ_T0043015.1 MGP_WSBEiJ_G0022001.1 mouse_genomes_project 16 24402905 24410492 - MGP_WSBEiJ_P0043015 Gmnc protein_coding unknown_likely_coding MGP_WSBEiJ_T0011204.1 MGP_WSBEiJ_G0009361.1 mouse_genomes_project 16 5063359 5063648 - Gm25782 misc_RNA misc_RNA MGP_WSBEiJ_T0042261.1 MGP_WSBEiJ_G0021830.1 mouse_genomes_project 16 7992909 8003157 - MGP_WSBEiJ_P0042261 Rsl1d1 protein_coding protein_coding MGP_WSBEiJ_T0042262.1 MGP_WSBEiJ_G0021830.1 mouse_genomes_project 16 7993444 7994935 - Rsl1d1 protein_coding retained_intron MGP_WSBEiJ_T0042263.1 MGP_WSBEiJ_G0021830.1 mouse_genomes_project 16 7996382 8003090 - Rsl1d1 protein_coding retained_intron MGP_WSBEiJ_T0042513.1 MGP_WSBEiJ_G0021887.1 mouse_genomes_project 16 14401801 14419569 + MGP_WSBEiJ_P0042513 Aifm3 protein_coding protein_coding MGP_WSBEiJ_T0042514.1 MGP_WSBEiJ_G0021887.1 mouse_genomes_project 16 14401853 14419569 + MGP_WSBEiJ_P0042514 Aifm3 protein_coding protein_coding MGP_WSBEiJ_T0042515.1 MGP_WSBEiJ_G0021887.1 mouse_genomes_project 16 14402037 14417490 + Aifm3 protein_coding retained_intron MGP_WSBEiJ_T0042516.1 MGP_WSBEiJ_G0021887.1 mouse_genomes_project 16 14411793 14419565 + Aifm3 protein_coding retained_intron MGP_WSBEiJ_T0042517.1 MGP_WSBEiJ_G0021887.1 mouse_genomes_project 16 14414335 14415798 + Aifm3 protein_coding retained_intron MGP_WSBEiJ_T0042518.1 MGP_WSBEiJ_G0021887.1 mouse_genomes_project 16 14414985 14418008 + Aifm3 protein_coding retained_intron MGP_WSBEiJ_T0009972.1 MGP_WSBEiJ_G0008129.1 mouse_genomes_project 16 28814360 28814455 + Gm27415 miRNA miRNA MGP_WSBEiJ_T0044439.1 MGP_WSBEiJ_G0022389.1 mouse_genomes_project 16 97019873 97626705 - MGP_WSBEiJ_P0044439 Dscam protein_coding protein_coding MGP_WSBEiJ_T0043503.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 38089292 39123070 + MGP_WSBEiJ_P0043503 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0043504.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 38089302 40365332 + MGP_WSBEiJ_P0043504 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0043505.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 38089317 39357398 + MGP_WSBEiJ_P0043505 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0043506.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 38089317 39565624 + MGP_WSBEiJ_P0043506 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0043507.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 38089526 38803768 + Lsamp protein_coding processed_transcript MGP_WSBEiJ_T0043508.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 39699708 40334743 + MGP_WSBEiJ_P0043508 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0043509.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 39699887 40370719 + MGP_WSBEiJ_P0043509 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0043510.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 39700269 39706110 + MGP_WSBEiJ_P0043510 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0043511.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 40332515 40363495 + MGP_WSBEiJ_P0043511 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0043512.1 MGP_WSBEiJ_G0022125.1 mouse_genomes_project 16 40332556 40363320 + MGP_WSBEiJ_P0043512 Lsamp protein_coding protein_coding MGP_WSBEiJ_T0009950.1 MGP_WSBEiJ_G0008107.1 mouse_genomes_project 16 10266897 10266976 + Mir193b miRNA miRNA MGP_WSBEiJ_T0012874.1 MGP_WSBEiJ_G0011004.1 mouse_genomes_project 16 43497754 43498158 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044064.1 MGP_WSBEiJ_G0022306.1 mouse_genomes_project 16 88959722 88960323 - MGP_WSBEiJ_P0044064 Krtap16-3 protein_coding protein_coding MGP_WSBEiJ_T0003623.1 MGP_WSBEiJ_G0003278.1 mouse_genomes_project 16 96501941 96517924 + Gm15341 antisense antisense MGP_WSBEiJ_T0043762.1 MGP_WSBEiJ_G0022187.1 mouse_genomes_project 16 54616108 54621319 - MGP_WSBEiJ_P0043762 Trmt10c protein_coding protein_coding MGP_WSBEiJ_T0097968.1 MGP_WSBEiJ_G0036631.1 mouse_genomes_project 16 53518668 53518775 + Gm22977 snRNA snRNA MGP_WSBEiJ_T0043870.1 MGP_WSBEiJ_G0022231.1 mouse_genomes_project 16 58064511 58122794 + MGP_WSBEiJ_P0043870 Gabrr3 protein_coding protein_coding MGP_WSBEiJ_T0097952.1 MGP_WSBEiJ_G0036615.1 mouse_genomes_project 16 33016577 33016705 - Gm25179 snRNA snRNA MGP_WSBEiJ_T0042631.1 MGP_WSBEiJ_G0021911.1 mouse_genomes_project 16 15181941 15190857 - MGP_WSBEiJ_P0042631 Ranbp1 protein_coding protein_coding MGP_WSBEiJ_T0042632.1 MGP_WSBEiJ_G0021911.1 mouse_genomes_project 16 15187125 15190811 - Ranbp1 protein_coding retained_intron MGP_WSBEiJ_T0042633.1 MGP_WSBEiJ_G0021911.1 mouse_genomes_project 16 15187366 15190599 - Ranbp1 protein_coding processed_transcript MGP_WSBEiJ_T0044045.1 MGP_WSBEiJ_G0022289.1 mouse_genomes_project 16 88624039 88625012 - MGP_WSBEiJ_P0044045 Krtap26-1 protein_coding protein_coding MGP_WSBEiJ_T0042220.1 MGP_WSBEiJ_G0021819.1 mouse_genomes_project 16 7547879 7549608 - MGP_WSBEiJ_P0042220 Socs1 protein_coding protein_coding MGP_WSBEiJ_T0043198.1 MGP_WSBEiJ_G0022048.1 mouse_genomes_project 16 30377249 30392210 + MGP_WSBEiJ_P0043198 protein_coding protein_coding MGP_WSBEiJ_T0043199.1 MGP_WSBEiJ_G0022048.1 mouse_genomes_project 16 30377560 30426694 + protein_coding processed_transcript MGP_WSBEiJ_T0043200.1 MGP_WSBEiJ_G0022048.1 mouse_genomes_project 16 30399918 30426853 + MGP_WSBEiJ_P0043200 protein_coding protein_coding MGP_WSBEiJ_T0043201.1 MGP_WSBEiJ_G0022048.1 mouse_genomes_project 16 30419905 30426846 + protein_coding processed_transcript MGP_WSBEiJ_T0043202.1 MGP_WSBEiJ_G0022048.1 mouse_genomes_project 16 30419984 30420583 + protein_coding processed_transcript MGP_WSBEiJ_T0043204.1 MGP_WSBEiJ_G0022048.1 mouse_genomes_project 16 30421169 30422566 + protein_coding retained_intron MGP_WSBEiJ_T0043205.1 MGP_WSBEiJ_G0022048.1 mouse_genomes_project 16 30422255 30422769 + protein_coding retained_intron MGP_WSBEiJ_T0042940.1 MGP_WSBEiJ_G0021981.1 mouse_genomes_project 16 20346085 20379140 + MGP_WSBEiJ_P0042940 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042941.1 MGP_WSBEiJ_G0021981.1 mouse_genomes_project 16 20352837 20382708 + protein_coding processed_transcript MGP_WSBEiJ_T0043603.1 MGP_WSBEiJ_G0022143.1 mouse_genomes_project 16 43036695 43075033 + MGP_WSBEiJ_P0043603 protein_coding protein_coding MGP_WSBEiJ_T0043799.1 MGP_WSBEiJ_G0022197.1 mouse_genomes_project 16 55798279 55858648 - MGP_WSBEiJ_P0043799 Tbc1d23 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043800.1 MGP_WSBEiJ_G0022197.1 mouse_genomes_project 16 55798284 55858597 - MGP_WSBEiJ_P0043800 Tbc1d23 protein_coding protein_coding MGP_WSBEiJ_T0043966.1 MGP_WSBEiJ_G0022263.1 mouse_genomes_project 16 77878316 77896396 - MGP_WSBEiJ_P0043966 protein_coding protein_coding MGP_WSBEiJ_T0042757.1 MGP_WSBEiJ_G0021942.1 mouse_genomes_project 16 17196151 17291566 + MGP_WSBEiJ_P0042757 Yeats2 protein_coding protein_coding MGP_WSBEiJ_T0042758.1 MGP_WSBEiJ_G0021942.1 mouse_genomes_project 16 17196151 17291566 + MGP_WSBEiJ_P0042758 Yeats2 protein_coding protein_coding MGP_WSBEiJ_T0010002.1 MGP_WSBEiJ_G0008159.1 mouse_genomes_project 16 92087720 92087798 - Gm27773 miRNA miRNA MGP_WSBEiJ_T0000927.1 MGP_WSBEiJ_G0000864.1 mouse_genomes_project 16 38440613 38441052 + TEC TEC MGP_WSBEiJ_T0099199.1 MGP_WSBEiJ_G0037862.1 mouse_genomes_project 16 36208132 36208265 + Gm25617 snoRNA snoRNA MGP_WSBEiJ_T0042191.1 MGP_WSBEiJ_G0021813.1 mouse_genomes_project 16 7090664 7134585 - MGP_WSBEiJ_P0042191 Tekt5 protein_coding protein_coding MGP_WSBEiJ_T0042192.1 MGP_WSBEiJ_G0021813.1 mouse_genomes_project 16 7093883 7134543 - MGP_WSBEiJ_P0042192 Tekt5 protein_coding protein_coding MGP_WSBEiJ_T0097963.1 MGP_WSBEiJ_G0036626.1 mouse_genomes_project 16 41345086 41345193 + Gm25873 snRNA snRNA MGP_WSBEiJ_T0043899.1 MGP_WSBEiJ_G0022239.1 mouse_genomes_project 16 61632454 61708015 + MGP_WSBEiJ_P0043899 Pros1 protein_coding protein_coding MGP_WSBEiJ_T0043900.1 MGP_WSBEiJ_G0022239.1 mouse_genomes_project 16 61674457 61676656 + Pros1 protein_coding retained_intron MGP_WSBEiJ_T0043901.1 MGP_WSBEiJ_G0022239.1 mouse_genomes_project 16 61698560 61707059 + Pros1 protein_coding processed_transcript MGP_WSBEiJ_T0097971.1 MGP_WSBEiJ_G0036634.1 mouse_genomes_project 16 61345966 61346070 + Gm24164 snRNA snRNA MGP_WSBEiJ_T0043118.1 MGP_WSBEiJ_G0022027.1 mouse_genomes_project 16 29514945 29527137 + MGP_WSBEiJ_P0043118 Pigz protein_coding protein_coding MGP_WSBEiJ_T0043119.1 MGP_WSBEiJ_G0022027.1 mouse_genomes_project 16 29515037 29525439 + Pigz protein_coding processed_transcript MGP_WSBEiJ_T0043120.1 MGP_WSBEiJ_G0022027.1 mouse_genomes_project 16 29515076 29523706 + Pigz protein_coding processed_transcript MGP_WSBEiJ_T0043121.1 MGP_WSBEiJ_G0022027.1 mouse_genomes_project 16 29523070 29523702 + Pigz protein_coding processed_transcript MGP_WSBEiJ_T0012824.1 MGP_WSBEiJ_G0010954.1 mouse_genomes_project 16 6757028 6757235 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043712.1 MGP_WSBEiJ_G0022174.1 mouse_genomes_project 16 48054993 48121915 + MGP_WSBEiJ_P0043712 Ift57 protein_coding protein_coding MGP_WSBEiJ_T0043713.1 MGP_WSBEiJ_G0022174.1 mouse_genomes_project 16 48055064 48119417 + MGP_WSBEiJ_P0043713 Ift57 protein_coding protein_coding MGP_WSBEiJ_T0043714.1 MGP_WSBEiJ_G0022174.1 mouse_genomes_project 16 48055115 48067683 + Ift57 protein_coding processed_transcript MGP_WSBEiJ_T0043715.1 MGP_WSBEiJ_G0022174.1 mouse_genomes_project 16 48066737 48120905 + MGP_WSBEiJ_P0043715 Ift57 protein_coding protein_coding MGP_WSBEiJ_T0042905.1 MGP_WSBEiJ_G0021969.1 mouse_genomes_project 16 19218239 19260125 + MGP_WSBEiJ_P0042905 Senp2 protein_coding protein_coding MGP_WSBEiJ_T0012861.1 MGP_WSBEiJ_G0010991.1 mouse_genomes_project 16 29571849 29572132 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000140.1 MGP_WSBEiJ_G0000106.1 mouse_genomes_project 16 16297697 16298181 - MGP_WSBEiJ_P0000140 Iglv3 IG_V_gene IG_V_gene MGP_WSBEiJ_T0043980.1 MGP_WSBEiJ_G0022270.1 mouse_genomes_project 16 84589218 84643346 + MGP_WSBEiJ_P0043980 Jam2 protein_coding protein_coding MGP_WSBEiJ_T0043981.1 MGP_WSBEiJ_G0022270.1 mouse_genomes_project 16 84589481 84628307 + MGP_WSBEiJ_P0043981 Jam2 protein_coding protein_coding MGP_WSBEiJ_T0043982.1 MGP_WSBEiJ_G0022270.1 mouse_genomes_project 16 84626715 84640300 + Jam2 protein_coding processed_transcript MGP_WSBEiJ_T0006744.1 MGP_WSBEiJ_G0005563.1 mouse_genomes_project 16 27710870 27716077 + 1700025H01Rik lincRNA lincRNA MGP_WSBEiJ_T0000017.1 MGP_WSBEiJ_G0000012.1 mouse_genomes_project 16 16097421 16097873 - MGP_WSBEiJ_P0000017 Iglc3 IG_C_gene IG_C_gene MGP_WSBEiJ_T0044067.1 MGP_WSBEiJ_G0022309.1 mouse_genomes_project 16 89032441 89033388 + MGP_WSBEiJ_P0044067 Krtap6-1 protein_coding protein_coding MGP_WSBEiJ_T0097298.1 MGP_WSBEiJ_G0035974.1 mouse_genomes_project 16 28520398 28523837 - Gm15742 sense_intronic sense_intronic MGP_WSBEiJ_T0042310.1 MGP_WSBEiJ_G0021844.1 mouse_genomes_project 16 10664658 10682798 + MGP_WSBEiJ_P0042310 Ntan1 protein_coding protein_coding MGP_WSBEiJ_T0042311.1 MGP_WSBEiJ_G0021844.1 mouse_genomes_project 16 10664684 10679803 + Ntan1 protein_coding processed_transcript MGP_WSBEiJ_T0042312.1 MGP_WSBEiJ_G0021844.1 mouse_genomes_project 16 10664706 10679920 + Ntan1 protein_coding processed_transcript MGP_WSBEiJ_T0042313.1 MGP_WSBEiJ_G0021844.1 mouse_genomes_project 16 10664713 10682795 + Ntan1 protein_coding processed_transcript MGP_WSBEiJ_T0042314.1 MGP_WSBEiJ_G0021844.1 mouse_genomes_project 16 10664751 10674890 + Ntan1 protein_coding retained_intron MGP_WSBEiJ_T0042315.1 MGP_WSBEiJ_G0021844.1 mouse_genomes_project 16 10664763 10689728 + MGP_WSBEiJ_P0042315 Ntan1 protein_coding protein_coding MGP_WSBEiJ_T0042316.1 MGP_WSBEiJ_G0021844.1 mouse_genomes_project 16 10678975 10680045 + Ntan1 protein_coding retained_intron MGP_WSBEiJ_T0042319.1 MGP_WSBEiJ_G0021844.1 mouse_genomes_project 16 10681430 10682513 + Ntan1 protein_coding retained_intron MGP_WSBEiJ_T0042298.1 MGP_WSBEiJ_G0021841.1 mouse_genomes_project 16 10495372 10501859 + MGP_WSBEiJ_P0042298 3110001I22Rik protein_coding protein_coding MGP_WSBEiJ_T0099212.1 MGP_WSBEiJ_G0037875.1 mouse_genomes_project 16 57366793 57366912 - Gm26019 snoRNA snoRNA MGP_WSBEiJ_T0042573.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14561999 14564947 + Ccdc74a protein_coding retained_intron MGP_WSBEiJ_T0042574.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562004 14564773 + MGP_WSBEiJ_P0042574 Ccdc74a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042575.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562004 14566270 + MGP_WSBEiJ_P0042575 Ccdc74a protein_coding protein_coding MGP_WSBEiJ_T0042576.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562080 14564005 + Ccdc74a protein_coding retained_intron MGP_WSBEiJ_T0042577.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562093 14566269 + MGP_WSBEiJ_P0042577 Ccdc74a protein_coding protein_coding MGP_WSBEiJ_T0042578.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562094 14565941 + MGP_WSBEiJ_P0042578 Ccdc74a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042579.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562142 14566270 + MGP_WSBEiJ_P0042579 Ccdc74a protein_coding protein_coding MGP_WSBEiJ_T0042580.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562147 14565979 + MGP_WSBEiJ_P0042580 Ccdc74a protein_coding protein_coding MGP_WSBEiJ_T0042581.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562202 14563391 + Ccdc74a protein_coding retained_intron MGP_WSBEiJ_T0042582.1 MGP_WSBEiJ_G0021894.1 mouse_genomes_project 16 14562229 14566270 + MGP_WSBEiJ_P0042582 Ccdc74a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044101.1 MGP_WSBEiJ_G0022327.1 mouse_genomes_project 16 90265141 90322300 - MGP_WSBEiJ_P0044101 Scaf4 protein_coding protein_coding MGP_WSBEiJ_T0044102.1 MGP_WSBEiJ_G0022327.1 mouse_genomes_project 16 90265340 90322417 - MGP_WSBEiJ_P0044102 Scaf4 protein_coding protein_coding MGP_WSBEiJ_T0012827.1 MGP_WSBEiJ_G0010957.1 mouse_genomes_project 16 7990242 7991254 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044042.1 MGP_WSBEiJ_G0022286.1 mouse_genomes_project 16 88535160 88537516 - MGP_WSBEiJ_P0044042 Cldn8 protein_coding protein_coding MGP_WSBEiJ_T0043869.1 MGP_WSBEiJ_G0022230.1 mouse_genomes_project 16 58021860 58022778 - MGP_WSBEiJ_P0043869 Olfr209 protein_coding protein_coding MGP_WSBEiJ_T0043453.1 MGP_WSBEiJ_G0022111.1 mouse_genomes_project 16 36407471 36413262 + MGP_WSBEiJ_P0043453 Gm21987 protein_coding protein_coding MGP_WSBEiJ_T0043454.1 MGP_WSBEiJ_G0022111.1 mouse_genomes_project 16 36407476 36413240 + Gm21987 protein_coding processed_transcript MGP_WSBEiJ_T0043455.1 MGP_WSBEiJ_G0022111.1 mouse_genomes_project 16 36407502 36413243 + MGP_WSBEiJ_P0043455 Gm21987 protein_coding protein_coding MGP_WSBEiJ_T0043456.1 MGP_WSBEiJ_G0022111.1 mouse_genomes_project 16 36407520 36413230 + Gm21987 protein_coding retained_intron MGP_WSBEiJ_T0043458.1 MGP_WSBEiJ_G0022111.1 mouse_genomes_project 16 36409722 36413222 + Gm21987 protein_coding retained_intron MGP_WSBEiJ_T0043459.1 MGP_WSBEiJ_G0022111.1 mouse_genomes_project 16 36409774 36413244 + Gm21987 protein_coding processed_transcript MGP_WSBEiJ_T0099206.1 MGP_WSBEiJ_G0037869.1 mouse_genomes_project 16 51409225 51409351 - Gm25723 snoRNA snoRNA MGP_WSBEiJ_T0044104.1 MGP_WSBEiJ_G0022329.1 mouse_genomes_project 16 90784069 90792169 - Mis18a protein_coding retained_intron MGP_WSBEiJ_T0044105.1 MGP_WSBEiJ_G0022329.1 mouse_genomes_project 16 90784069 90792169 - MGP_WSBEiJ_P0044105 Mis18a protein_coding protein_coding MGP_WSBEiJ_T0044106.1 MGP_WSBEiJ_G0022329.1 mouse_genomes_project 16 90786211 90791904 - Mis18a protein_coding retained_intron MGP_WSBEiJ_T0044289.1 MGP_WSBEiJ_G0022366.1 mouse_genomes_project 16 94161063 94185641 + MGP_WSBEiJ_P0044289 Chaf1b protein_coding protein_coding MGP_WSBEiJ_T0044290.1 MGP_WSBEiJ_G0022366.1 mouse_genomes_project 16 94161086 94185603 + MGP_WSBEiJ_P0044290 Chaf1b protein_coding protein_coding MGP_WSBEiJ_T0044291.1 MGP_WSBEiJ_G0022366.1 mouse_genomes_project 16 94161093 94171451 + Chaf1b protein_coding retained_intron MGP_WSBEiJ_T0044292.1 MGP_WSBEiJ_G0022366.1 mouse_genomes_project 16 94161178 94162634 + MGP_WSBEiJ_P0044292 Chaf1b protein_coding protein_coding MGP_WSBEiJ_T0044293.1 MGP_WSBEiJ_G0022366.1 mouse_genomes_project 16 94161364 94164315 + MGP_WSBEiJ_P0044293 Chaf1b protein_coding protein_coding MGP_WSBEiJ_T0044294.1 MGP_WSBEiJ_G0022366.1 mouse_genomes_project 16 94163872 94169952 + Chaf1b protein_coding processed_transcript MGP_WSBEiJ_T0044295.1 MGP_WSBEiJ_G0022366.1 mouse_genomes_project 16 94169903 94178609 + Chaf1b protein_coding retained_intron MGP_WSBEiJ_T0044296.1 MGP_WSBEiJ_G0022366.1 mouse_genomes_project 16 94183174 94185636 + Chaf1b protein_coding retained_intron MGP_WSBEiJ_T0099213.1 MGP_WSBEiJ_G0037876.1 mouse_genomes_project 16 59823397 59823474 + Gm23852 snoRNA snoRNA MGP_WSBEiJ_T0042742.1 MGP_WSBEiJ_G0021936.1 mouse_genomes_project 16 16683560 16684186 - MGP_WSBEiJ_P0042742 protein_coding protein_coding MGP_WSBEiJ_T0042723.1 MGP_WSBEiJ_G0021927.1 mouse_genomes_project 16 15855744 15976909 + MGP_WSBEiJ_P0042723 Gm28539 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042209.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7294891 7501720 + MGP_WSBEiJ_P0042209 Clec16a protein_coding protein_coding MGP_WSBEiJ_T0042210.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7294891 7501720 + MGP_WSBEiJ_P0042210 Clec16a protein_coding protein_coding MGP_WSBEiJ_T0042211.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7294916 7501720 + MGP_WSBEiJ_P0042211 Clec16a protein_coding protein_coding MGP_WSBEiJ_T0042212.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7294929 7312995 + Clec16a protein_coding processed_transcript MGP_WSBEiJ_T0042213.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7294950 7478502 + MGP_WSBEiJ_P0042213 Clec16a protein_coding protein_coding MGP_WSBEiJ_T0042214.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7294961 7309294 + MGP_WSBEiJ_P0042214 Clec16a protein_coding protein_coding MGP_WSBEiJ_T0042215.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7294961 7498700 + MGP_WSBEiJ_P0042215 Clec16a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042216.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7294961 7448080 + MGP_WSBEiJ_P0042216 Clec16a protein_coding protein_coding MGP_WSBEiJ_T0042217.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7349730 7499341 + MGP_WSBEiJ_P0042217 Clec16a protein_coding protein_coding MGP_WSBEiJ_T0042218.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7361361 7382368 + Clec16a protein_coding processed_transcript MGP_WSBEiJ_T0042219.1 MGP_WSBEiJ_G0021818.1 mouse_genomes_project 16 7381626 7391182 + Clec16a protein_coding processed_transcript MGP_WSBEiJ_T0011213.1 MGP_WSBEiJ_G0009370.1 mouse_genomes_project 16 64818397 64818710 + Gm22217 misc_RNA misc_RNA MGP_WSBEiJ_T0042070.1 MGP_WSBEiJ_G0021779.1 mouse_genomes_project 16 1213799 1222849 - MGP_WSBEiJ_P0042070 Nmral1 protein_coding protein_coding MGP_WSBEiJ_T0042071.1 MGP_WSBEiJ_G0021779.1 mouse_genomes_project 16 1215057 1222896 - MGP_WSBEiJ_P0042071 Nmral1 protein_coding protein_coding MGP_WSBEiJ_T0042072.1 MGP_WSBEiJ_G0021779.1 mouse_genomes_project 16 1215057 1223096 - MGP_WSBEiJ_P0042072 Nmral1 protein_coding protein_coding MGP_WSBEiJ_T0042073.1 MGP_WSBEiJ_G0021779.1 mouse_genomes_project 16 1216035 1222852 - MGP_WSBEiJ_P0042073 Nmral1 protein_coding protein_coding MGP_WSBEiJ_T0042074.1 MGP_WSBEiJ_G0021779.1 mouse_genomes_project 16 1218247 1222828 - Nmral1 protein_coding retained_intron MGP_WSBEiJ_T0042075.1 MGP_WSBEiJ_G0021779.1 mouse_genomes_project 16 1219563 1222844 - Nmral1 protein_coding retained_intron MGP_WSBEiJ_T0016928.1 MGP_WSBEiJ_G0014745.1 mouse_genomes_project 16 87413279 87423273 + B130034C11Rik processed_transcript retained_intron MGP_WSBEiJ_T0016929.1 MGP_WSBEiJ_G0014745.1 mouse_genomes_project 16 87413353 87423476 + B130034C11Rik processed_transcript processed_transcript MGP_WSBEiJ_T0044368.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95723237 95886941 - MGP_WSBEiJ_P0044368 Erg protein_coding protein_coding MGP_WSBEiJ_T0044369.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95723241 95826918 - MGP_WSBEiJ_P0044369 Erg protein_coding protein_coding MGP_WSBEiJ_T0044370.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95725749 95946596 - MGP_WSBEiJ_P0044370 Erg protein_coding protein_coding MGP_WSBEiJ_T0044371.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95725749 95886941 - MGP_WSBEiJ_P0044371 Erg protein_coding protein_coding MGP_WSBEiJ_T0044372.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95725881 95826963 - MGP_WSBEiJ_P0044372 Erg protein_coding protein_coding MGP_WSBEiJ_T0044373.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95726184 95881382 - MGP_WSBEiJ_P0044373 Erg protein_coding protein_coding MGP_WSBEiJ_T0044374.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95726345 95826860 - MGP_WSBEiJ_P0044374 Erg protein_coding protein_coding MGP_WSBEiJ_T0044375.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95726345 95886899 - MGP_WSBEiJ_P0044375 Erg protein_coding protein_coding MGP_WSBEiJ_T0044376.1 MGP_WSBEiJ_G0022377.1 mouse_genomes_project 16 95726345 95826860 - MGP_WSBEiJ_P0044376 Erg protein_coding protein_coding MGP_WSBEiJ_T0044078.1 MGP_WSBEiJ_G0022318.1 mouse_genomes_project 16 89177433 89177976 + MGP_WSBEiJ_P0044078 1110057P08Rik protein_coding protein_coding MGP_WSBEiJ_T0043961.1 MGP_WSBEiJ_G0022259.1 mouse_genomes_project 16 76467776 76575861 + MGP_WSBEiJ_P0043961 Usp25 protein_coding protein_coding MGP_WSBEiJ_T0003586.1 MGP_WSBEiJ_G0003250.1 mouse_genomes_project 16 19754321 19762974 + 9230117E06Rik antisense antisense MGP_WSBEiJ_T0042043.1 MGP_WSBEiJ_G0021774.1 mouse_genomes_project 16 1087269 1108337 + MGP_WSBEiJ_P0042043 Glis2 protein_coding protein_coding MGP_WSBEiJ_T0042044.1 MGP_WSBEiJ_G0021774.1 mouse_genomes_project 16 1093713 1102796 + MGP_WSBEiJ_P0042044 Glis2 protein_coding protein_coding MGP_WSBEiJ_T0042045.1 MGP_WSBEiJ_G0021774.1 mouse_genomes_project 16 1101133 1108322 + Glis2 protein_coding retained_intron MGP_WSBEiJ_T0042046.1 MGP_WSBEiJ_G0021774.1 mouse_genomes_project 16 1103792 1106036 + Glis2 protein_coding retained_intron MGP_WSBEiJ_T0042047.1 MGP_WSBEiJ_G0021774.1 mouse_genomes_project 16 1104010 1117237 + Glis2 protein_coding processed_transcript MGP_WSBEiJ_T0012886.1 MGP_WSBEiJ_G0011016.1 mouse_genomes_project 16 74341619 74342627 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100598.1 MGP_WSBEiJ_G0039056.1 mouse_genomes_project 16 57628569 57629387 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0042034.1 MGP_WSBEiJ_G0021771.1 mouse_genomes_project 16 764454 798137 - MGP_WSBEiJ_P0042034 Adcy9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042035.1 MGP_WSBEiJ_G0021771.1 mouse_genomes_project 16 767104 900552 - MGP_WSBEiJ_P0042035 Adcy9 protein_coding protein_coding MGP_WSBEiJ_T0042036.1 MGP_WSBEiJ_G0021771.1 mouse_genomes_project 16 767104 899862 - MGP_WSBEiJ_P0042036 Adcy9 protein_coding protein_coding MGP_WSBEiJ_T0042037.1 MGP_WSBEiJ_G0021771.1 mouse_genomes_project 16 767125 899641 - MGP_WSBEiJ_P0042037 Adcy9 protein_coding protein_coding MGP_WSBEiJ_T0006757.1 MGP_WSBEiJ_G0005575.1 mouse_genomes_project 16 49115332 49129188 - Dubr lincRNA lincRNA MGP_WSBEiJ_T0006758.1 MGP_WSBEiJ_G0005575.1 mouse_genomes_project 16 49115337 49129094 - Dubr lincRNA lincRNA MGP_WSBEiJ_T0006759.1 MGP_WSBEiJ_G0005575.1 mouse_genomes_project 16 49123161 49129148 - Dubr lincRNA lincRNA MGP_WSBEiJ_T0006760.1 MGP_WSBEiJ_G0005575.1 mouse_genomes_project 16 49123848 49129099 - Dubr lincRNA lincRNA MGP_WSBEiJ_T0043006.1 MGP_WSBEiJ_G0021999.1 mouse_genomes_project 16 23925895 23950329 - MGP_WSBEiJ_P0043006 Tmem207 protein_coding protein_coding MGP_WSBEiJ_T0096793.1 MGP_WSBEiJ_G0035474.1 mouse_genomes_project 16 89411966 89412386 - pseudogene pseudogene MGP_WSBEiJ_T0044428.1 MGP_WSBEiJ_G0022386.1 mouse_genomes_project 16 96775363 96842977 + MGP_WSBEiJ_P0044428 Igsf5 protein_coding protein_coding MGP_WSBEiJ_T0044429.1 MGP_WSBEiJ_G0022386.1 mouse_genomes_project 16 96775489 96827805 + MGP_WSBEiJ_P0044429 Igsf5 protein_coding protein_coding MGP_WSBEiJ_T0044430.1 MGP_WSBEiJ_G0022386.1 mouse_genomes_project 16 96775489 96827808 + MGP_WSBEiJ_P0044430 Igsf5 protein_coding protein_coding MGP_WSBEiJ_T0044431.1 MGP_WSBEiJ_G0022386.1 mouse_genomes_project 16 96775489 96951784 + MGP_WSBEiJ_P0044431 Igsf5 protein_coding protein_coding MGP_WSBEiJ_T0044432.1 MGP_WSBEiJ_G0022386.1 mouse_genomes_project 16 96807948 96827106 + Igsf5 protein_coding processed_transcript MGP_WSBEiJ_T0044433.1 MGP_WSBEiJ_G0022386.1 mouse_genomes_project 16 96820205 96842810 + MGP_WSBEiJ_P0044433 Igsf5 protein_coding protein_coding MGP_WSBEiJ_T0097965.1 MGP_WSBEiJ_G0036628.1 mouse_genomes_project 16 45838420 45838528 - Gm24651 snRNA snRNA MGP_WSBEiJ_T0003576.1 MGP_WSBEiJ_G0003241.1 mouse_genomes_project 16 7420512 7435909 - Gm15558 antisense antisense MGP_WSBEiJ_T0009989.1 MGP_WSBEiJ_G0008146.1 mouse_genomes_project 16 59436501 59436614 - Gm27784 miRNA miRNA MGP_WSBEiJ_T0043347.1 MGP_WSBEiJ_G0022084.1 mouse_genomes_project 16 33987399 33988226 + MGP_WSBEiJ_P0043347 protein_coding protein_coding MGP_WSBEiJ_T0099194.1 MGP_WSBEiJ_G0037857.1 mouse_genomes_project 16 29318194 29318337 - Gm24879 snoRNA snoRNA MGP_WSBEiJ_T0006756.1 MGP_WSBEiJ_G0005574.1 mouse_genomes_project 16 48908190 48942707 + G730013B05Rik lincRNA lincRNA MGP_WSBEiJ_T0011210.1 MGP_WSBEiJ_G0009367.1 mouse_genomes_project 16 39454957 39455120 - Gm27587 misc_RNA misc_RNA MGP_WSBEiJ_T0042087.1 MGP_WSBEiJ_G0021782.1 mouse_genomes_project 16 1341949 1359575 + MGP_WSBEiJ_P0042087 4930562C15Rik protein_coding non_stop_decay MGP_WSBEiJ_T0042088.1 MGP_WSBEiJ_G0021782.1 mouse_genomes_project 16 1341949 1373965 + MGP_WSBEiJ_P0042088 4930562C15Rik protein_coding protein_coding MGP_WSBEiJ_T0042089.1 MGP_WSBEiJ_G0021782.1 mouse_genomes_project 16 1347631 1359581 + MGP_WSBEiJ_P0042089 4930562C15Rik protein_coding non_stop_decay MGP_WSBEiJ_T0042090.1 MGP_WSBEiJ_G0021782.1 mouse_genomes_project 16 1357262 1367336 + MGP_WSBEiJ_P0042090 4930562C15Rik protein_coding protein_coding MGP_WSBEiJ_T0042091.1 MGP_WSBEiJ_G0021782.1 mouse_genomes_project 16 1367846 1373623 + MGP_WSBEiJ_P0042091 4930562C15Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042092.1 MGP_WSBEiJ_G0021782.1 mouse_genomes_project 16 1370596 1371452 + 4930562C15Rik protein_coding retained_intron MGP_WSBEiJ_T0042123.1 MGP_WSBEiJ_G0021795.1 mouse_genomes_project 16 1732709 1741355 - MGP_WSBEiJ_P0042123 Nagpa protein_coding protein_coding MGP_WSBEiJ_T0042124.1 MGP_WSBEiJ_G0021795.1 mouse_genomes_project 16 1732709 1741345 - MGP_WSBEiJ_P0042124 Nagpa protein_coding protein_coding MGP_WSBEiJ_T0042125.1 MGP_WSBEiJ_G0021795.1 mouse_genomes_project 16 1732807 1735108 - Nagpa protein_coding processed_transcript MGP_WSBEiJ_T0042126.1 MGP_WSBEiJ_G0021795.1 mouse_genomes_project 16 1737155 1740820 - Nagpa protein_coding retained_intron MGP_WSBEiJ_T0100602.1 MGP_WSBEiJ_G0039060.1 mouse_genomes_project 16 93884472 93886762 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0042545.1 MGP_WSBEiJ_G0021892.1 mouse_genomes_project 16 14487592 14491308 - Slc7a4 protein_coding retained_intron MGP_WSBEiJ_T0042546.1 MGP_WSBEiJ_G0021892.1 mouse_genomes_project 16 14487913 14491307 - MGP_WSBEiJ_P0042546 Slc7a4 protein_coding protein_coding MGP_WSBEiJ_T0042547.1 MGP_WSBEiJ_G0021892.1 mouse_genomes_project 16 14490039 14491268 - MGP_WSBEiJ_P0042547 Slc7a4 protein_coding protein_coding MGP_WSBEiJ_T0042548.1 MGP_WSBEiJ_G0021892.1 mouse_genomes_project 16 14490149 14490857 - MGP_WSBEiJ_P0042548 Slc7a4 protein_coding protein_coding MGP_WSBEiJ_T0042549.1 MGP_WSBEiJ_G0021892.1 mouse_genomes_project 16 14490325 14491308 - MGP_WSBEiJ_P0042549 Slc7a4 protein_coding protein_coding MGP_WSBEiJ_T0042806.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17665704 17675616 + MGP_WSBEiJ_P0042806 Vwa5b2 protein_coding protein_coding MGP_WSBEiJ_T0042807.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17665815 17666970 + Vwa5b2 protein_coding processed_transcript MGP_WSBEiJ_T0042808.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17665815 17682511 + MGP_WSBEiJ_P0042808 Vwa5b2 protein_coding protein_coding MGP_WSBEiJ_T0042809.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17665817 17668359 + Vwa5b2 protein_coding processed_transcript MGP_WSBEiJ_T0042810.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17666084 17668393 + Vwa5b2 protein_coding retained_intron MGP_WSBEiJ_T0042811.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17666105 17682517 + MGP_WSBEiJ_P0042811 Vwa5b2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042812.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17666292 17666765 + Vwa5b2 protein_coding retained_intron MGP_WSBEiJ_T0042813.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17666323 17669562 + Vwa5b2 protein_coding retained_intron MGP_WSBEiJ_T0042814.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17666379 17675611 + MGP_WSBEiJ_P0042814 Vwa5b2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042815.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17668328 17682508 + MGP_WSBEiJ_P0042815 Vwa5b2 protein_coding protein_coding MGP_WSBEiJ_T0042816.1 MGP_WSBEiJ_G0021951.1 mouse_genomes_project 16 17679924 17682511 + Vwa5b2 protein_coding retained_intron MGP_WSBEiJ_T0010004.1 MGP_WSBEiJ_G0008161.1 mouse_genomes_project 16 93594979 93595076 + Mir802 miRNA miRNA MGP_WSBEiJ_T0006748.1 MGP_WSBEiJ_G0005567.1 mouse_genomes_project 16 33610553 33613550 - Gm26838 lincRNA lincRNA MGP_WSBEiJ_T0012836.1 MGP_WSBEiJ_G0010966.1 mouse_genomes_project 16 12726451 12726734 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016912.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76683700 77085349 + processed_transcript lincRNA MGP_WSBEiJ_T0016913.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76683700 76833397 + processed_transcript lincRNA MGP_WSBEiJ_T0016914.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76683702 77083880 + processed_transcript lincRNA MGP_WSBEiJ_T0016915.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76796461 77169859 + processed_transcript lincRNA MGP_WSBEiJ_T0016916.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76796469 76829681 + processed_transcript lincRNA MGP_WSBEiJ_T0016917.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76796486 77081850 + processed_transcript lincRNA MGP_WSBEiJ_T0016918.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76796540 77085370 + processed_transcript lincRNA MGP_WSBEiJ_T0016919.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76796609 77042311 + processed_transcript lincRNA MGP_WSBEiJ_T0016920.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76796785 77181366 + processed_transcript lincRNA MGP_WSBEiJ_T0016921.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76929410 76931894 + processed_transcript TEC MGP_WSBEiJ_T0016922.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76976221 77085481 + processed_transcript lincRNA MGP_WSBEiJ_T0016923.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 76976389 77181370 + processed_transcript lincRNA MGP_WSBEiJ_T0016924.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 77080753 77083000 + processed_transcript TEC MGP_WSBEiJ_T0016925.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 77081291 77081893 + processed_transcript lincRNA MGP_WSBEiJ_T0016926.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 77160566 77181364 + processed_transcript lincRNA MGP_WSBEiJ_T0016927.1 MGP_WSBEiJ_G0014744.1 mouse_genomes_project 16 77169570 77181364 + processed_transcript lincRNA MGP_WSBEiJ_T0012865.1 MGP_WSBEiJ_G0010995.1 mouse_genomes_project 16 35195359 35196206 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043024.1 MGP_WSBEiJ_G0022006.1 mouse_genomes_project 16 26282093 26386031 - MGP_WSBEiJ_P0043024 Mb21d2 protein_coding protein_coding MGP_WSBEiJ_T0043296.1 MGP_WSBEiJ_G0022067.1 mouse_genomes_project 16 32454715 32490770 + MGP_WSBEiJ_P0043296 Ccdc14 protein_coding protein_coding MGP_WSBEiJ_T0042287.1 MGP_WSBEiJ_G0021837.1 mouse_genomes_project 16 9926685 9961295 + MGP_WSBEiJ_P0042287 Ercc4 protein_coding protein_coding MGP_WSBEiJ_T0042288.1 MGP_WSBEiJ_G0021837.1 mouse_genomes_project 16 9926918 9942808 + Ercc4 protein_coding retained_intron MGP_WSBEiJ_T0042289.1 MGP_WSBEiJ_G0021837.1 mouse_genomes_project 16 9926936 9946589 + MGP_WSBEiJ_P0042289 Ercc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042290.1 MGP_WSBEiJ_G0021837.1 mouse_genomes_project 16 9928795 9963178 + MGP_WSBEiJ_P0042290 Ercc4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042291.1 MGP_WSBEiJ_G0021837.1 mouse_genomes_project 16 9951331 9957218 + Ercc4 protein_coding processed_transcript MGP_WSBEiJ_T0044160.1 MGP_WSBEiJ_G0022342.1 mouse_genomes_project 16 91510497 91531155 + MGP_WSBEiJ_P0044160 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044161.1 MGP_WSBEiJ_G0022342.1 mouse_genomes_project 16 91510568 91531167 + MGP_WSBEiJ_P0044161 protein_coding protein_coding MGP_WSBEiJ_T0044162.1 MGP_WSBEiJ_G0022342.1 mouse_genomes_project 16 91510653 91525723 + protein_coding retained_intron MGP_WSBEiJ_T0044163.1 MGP_WSBEiJ_G0022342.1 mouse_genomes_project 16 91510653 91530233 + MGP_WSBEiJ_P0044163 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044164.1 MGP_WSBEiJ_G0022342.1 mouse_genomes_project 16 91510777 91520166 + protein_coding processed_transcript MGP_WSBEiJ_T0000943.1 MGP_WSBEiJ_G0000879.1 mouse_genomes_project 16 77133985 77137017 + TEC TEC MGP_WSBEiJ_T0043797.1 MGP_WSBEiJ_G0022195.1 mouse_genomes_project 16 55749865 55783159 + MGP_WSBEiJ_P0043797 Tomm70a protein_coding protein_coding MGP_WSBEiJ_T0042119.1 MGP_WSBEiJ_G0021791.1 mouse_genomes_project 16 1536485 1570779 - MGP_WSBEiJ_P0042119 Glyr1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044044.1 MGP_WSBEiJ_G0022288.1 mouse_genomes_project 16 88602568 88603449 - MGP_WSBEiJ_P0044044 2310079G19Rik protein_coding protein_coding MGP_WSBEiJ_T0009964.1 MGP_WSBEiJ_G0008121.1 mouse_genomes_project 16 16940026 16940128 - Gm27883 miRNA miRNA MGP_WSBEiJ_T0044063.1 MGP_WSBEiJ_G0022305.1 mouse_genomes_project 16 88927561 88928022 - MGP_WSBEiJ_P0044063 Krtap19-9b protein_coding protein_coding MGP_WSBEiJ_T0003571.1 MGP_WSBEiJ_G0003237.1 mouse_genomes_project 16 388686 391534 - antisense antisense MGP_WSBEiJ_T0042198.1 MGP_WSBEiJ_G0021815.1 mouse_genomes_project 16 7153678 7191522 - MGP_WSBEiJ_P0042198 Tvp23a protein_coding protein_coding MGP_WSBEiJ_T0042200.1 MGP_WSBEiJ_G0021815.1 mouse_genomes_project 16 7156368 7191305 - MGP_WSBEiJ_P0042200 Tvp23a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042201.1 MGP_WSBEiJ_G0021815.1 mouse_genomes_project 16 7157335 7191487 - Tvp23a protein_coding processed_transcript MGP_WSBEiJ_T0042202.1 MGP_WSBEiJ_G0021815.1 mouse_genomes_project 16 7163275 7168081 - Tvp23a protein_coding processed_transcript MGP_WSBEiJ_T0042203.1 MGP_WSBEiJ_G0021815.1 mouse_genomes_project 16 7164455 7168157 - Tvp23a protein_coding processed_transcript MGP_WSBEiJ_T0043088.1 MGP_WSBEiJ_G0022022.1 mouse_genomes_project 16 28807566 28827633 - MGP_WSBEiJ_P0043088 Ppp1r2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043089.1 MGP_WSBEiJ_G0022022.1 mouse_genomes_project 16 28810830 28827655 - MGP_WSBEiJ_P0043089 Ppp1r2 protein_coding protein_coding MGP_WSBEiJ_T0012890.1 MGP_WSBEiJ_G0011020.1 mouse_genomes_project 16 78512009 78512368 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099224.1 MGP_WSBEiJ_G0037887.1 mouse_genomes_project 16 85006010 85006163 + Gm27295 snoRNA snoRNA MGP_WSBEiJ_T0042161.1 MGP_WSBEiJ_G0021805.1 mouse_genomes_project 16 5275270 5289517 - MGP_WSBEiJ_P0042161 Carhsp1 protein_coding protein_coding MGP_WSBEiJ_T0043971.1 MGP_WSBEiJ_G0022266.1 mouse_genomes_project 16 78472724 78494561 + MGP_WSBEiJ_P0043971 Chodl protein_coding protein_coding MGP_WSBEiJ_T0043972.1 MGP_WSBEiJ_G0022266.1 mouse_genomes_project 16 78472724 78490032 + MGP_WSBEiJ_P0043972 Chodl protein_coding protein_coding MGP_WSBEiJ_T0043973.1 MGP_WSBEiJ_G0022266.1 mouse_genomes_project 16 78472724 78492731 + MGP_WSBEiJ_P0043973 Chodl protein_coding protein_coding MGP_WSBEiJ_T0042759.1 MGP_WSBEiJ_G0021943.1 mouse_genomes_project 16 17292302 17301563 - MGP_WSBEiJ_P0042759 Map6d1 protein_coding protein_coding MGP_WSBEiJ_T0016894.1 MGP_WSBEiJ_G0014732.1 mouse_genomes_project 16 14997986 14999135 + Gm15954 processed_transcript processed_transcript MGP_WSBEiJ_T0043861.1 MGP_WSBEiJ_G0022222.1 mouse_genomes_project 16 57795578 57796573 + MGP_WSBEiJ_P0043861 Olfr195 protein_coding protein_coding MGP_WSBEiJ_T0096987.1 MGP_WSBEiJ_G0035668.1 mouse_genomes_project 16 97988562 97988670 - Gm24777 rRNA rRNA MGP_WSBEiJ_T0044036.1 MGP_WSBEiJ_G0022284.1 mouse_genomes_project 16 87839917 88008797 - MGP_WSBEiJ_P0044036 Grik1 protein_coding protein_coding MGP_WSBEiJ_T0044037.1 MGP_WSBEiJ_G0022284.1 mouse_genomes_project 16 87839917 88033002 - MGP_WSBEiJ_P0044037 Grik1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044038.1 MGP_WSBEiJ_G0022284.1 mouse_genomes_project 16 87839917 88008797 - MGP_WSBEiJ_P0044038 Grik1 protein_coding protein_coding MGP_WSBEiJ_T0044039.1 MGP_WSBEiJ_G0022284.1 mouse_genomes_project 16 87839917 88009413 - MGP_WSBEiJ_P0044039 Grik1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044040.1 MGP_WSBEiJ_G0022284.1 mouse_genomes_project 16 87857927 88008797 - MGP_WSBEiJ_P0044040 Grik1 protein_coding protein_coding MGP_WSBEiJ_T0006770.1 MGP_WSBEiJ_G0005583.1 mouse_genomes_project 16 76456597 76463134 - lincRNA lincRNA MGP_WSBEiJ_T0006771.1 MGP_WSBEiJ_G0005583.1 mouse_genomes_project 16 76459387 76463140 - lincRNA lincRNA MGP_WSBEiJ_T0006743.1 MGP_WSBEiJ_G0005562.1 mouse_genomes_project 16 27494692 27508595 + 4632428C04Rik lincRNA lincRNA MGP_WSBEiJ_T0012873.1 MGP_WSBEiJ_G0011003.1 mouse_genomes_project 16 43089464 43089756 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006723.1 MGP_WSBEiJ_G0005545.1 mouse_genomes_project 16 7689108 7691894 - Gm21859 lincRNA lincRNA MGP_WSBEiJ_T0042689.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470849 15539123 + MGP_WSBEiJ_P0042689 Gnb1l protein_coding protein_coding MGP_WSBEiJ_T0042690.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470904 15524842 + MGP_WSBEiJ_P0042690 Gnb1l protein_coding protein_coding MGP_WSBEiJ_T0042691.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470959 15525026 + Gnb1l protein_coding processed_transcript MGP_WSBEiJ_T0042692.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470967 15524892 + MGP_WSBEiJ_P0042692 Gnb1l protein_coding protein_coding MGP_WSBEiJ_T0042693.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470967 15539071 + MGP_WSBEiJ_P0042693 Gnb1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042694.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470969 15539123 + MGP_WSBEiJ_P0042694 Gnb1l protein_coding protein_coding MGP_WSBEiJ_T0042695.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470969 15539123 + MGP_WSBEiJ_P0042695 Gnb1l protein_coding protein_coding MGP_WSBEiJ_T0042696.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470972 15524965 + Gnb1l protein_coding processed_transcript MGP_WSBEiJ_T0042697.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470978 15516679 + MGP_WSBEiJ_P0042697 Gnb1l protein_coding protein_coding MGP_WSBEiJ_T0042699.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15470983 15536982 + MGP_WSBEiJ_P0042699 Gnb1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042700.1 MGP_WSBEiJ_G0021918.1 mouse_genomes_project 16 15521196 15525038 + Gnb1l protein_coding processed_transcript MGP_WSBEiJ_T0042972.1 MGP_WSBEiJ_G0021985.1 mouse_genomes_project 16 20540974 20545638 - MGP_WSBEiJ_P0042972 BC106179 protein_coding protein_coding MGP_WSBEiJ_T0043348.1 MGP_WSBEiJ_G0022085.1 mouse_genomes_project 16 33987403 33988221 + MGP_WSBEiJ_P0043348 protein_coding protein_coding MGP_WSBEiJ_T0012863.1 MGP_WSBEiJ_G0010993.1 mouse_genomes_project 16 30365909 30366849 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044046.1 MGP_WSBEiJ_G0022290.1 mouse_genomes_project 16 88642403 88643049 - MGP_WSBEiJ_P0044046 Krtap27-1 protein_coding protein_coding MGP_WSBEiJ_T0042617.1 MGP_WSBEiJ_G0021907.1 mouse_genomes_project 16 14988560 15020366 - MGP_WSBEiJ_P0042617 Prodh protein_coding protein_coding MGP_WSBEiJ_T0042623.1 MGP_WSBEiJ_G0021907.1 mouse_genomes_project 16 15000494 15020360 - MGP_WSBEiJ_P0042623 Prodh protein_coding protein_coding MGP_WSBEiJ_T0042624.1 MGP_WSBEiJ_G0021907.1 mouse_genomes_project 16 15000898 15010461 - MGP_WSBEiJ_P0042624 Prodh protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042625.1 MGP_WSBEiJ_G0021907.1 mouse_genomes_project 16 15001028 15011135 - MGP_WSBEiJ_P0042625 Prodh protein_coding protein_coding MGP_WSBEiJ_T0042626.1 MGP_WSBEiJ_G0021907.1 mouse_genomes_project 16 15012204 15013512 - Prodh protein_coding processed_transcript MGP_WSBEiJ_T0042627.1 MGP_WSBEiJ_G0021907.1 mouse_genomes_project 16 15015396 15020225 - MGP_WSBEiJ_P0042627 Prodh protein_coding protein_coding MGP_WSBEiJ_T0100594.1 MGP_WSBEiJ_G0039052.1 mouse_genomes_project 16 13540921 13541042 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0043885.1 MGP_WSBEiJ_G0022235.1 mouse_genomes_project 16 58323544 59319945 - MGP_WSBEiJ_P0043885 Epha6 protein_coding protein_coding MGP_WSBEiJ_T0043886.1 MGP_WSBEiJ_G0022235.1 mouse_genomes_project 16 58429787 58672894 - MGP_WSBEiJ_P0043886 Epha6 protein_coding protein_coding MGP_WSBEiJ_T0043887.1 MGP_WSBEiJ_G0022235.1 mouse_genomes_project 16 59135146 59320228 - Epha6 protein_coding retained_intron MGP_WSBEiJ_T0043888.1 MGP_WSBEiJ_G0022235.1 mouse_genomes_project 16 59188933 59319916 - Epha6 protein_coding processed_transcript MGP_WSBEiJ_T0097970.1 MGP_WSBEiJ_G0036633.1 mouse_genomes_project 16 54340003 54340103 - Gm26369 snRNA snRNA MGP_WSBEiJ_T0009991.1 MGP_WSBEiJ_G0008148.1 mouse_genomes_project 16 64283608 64283718 + Gm23659 miRNA miRNA MGP_WSBEiJ_T0042608.1 MGP_WSBEiJ_G0021905.1 mouse_genomes_project 16 14850296 14853305 - MGP_WSBEiJ_P0042608 Slc25a1 protein_coding protein_coding MGP_WSBEiJ_T0042609.1 MGP_WSBEiJ_G0021905.1 mouse_genomes_project 16 14850767 14852429 - Slc25a1 protein_coding retained_intron MGP_WSBEiJ_T0042610.1 MGP_WSBEiJ_G0021905.1 mouse_genomes_project 16 14850801 14852502 - MGP_WSBEiJ_P0042610 Slc25a1 protein_coding protein_coding MGP_WSBEiJ_T0042611.1 MGP_WSBEiJ_G0021905.1 mouse_genomes_project 16 14851351 14852973 - Slc25a1 protein_coding retained_intron MGP_WSBEiJ_T0042612.1 MGP_WSBEiJ_G0021905.1 mouse_genomes_project 16 14852235 14853215 - Slc25a1 protein_coding retained_intron MGP_WSBEiJ_T0042613.1 MGP_WSBEiJ_G0021905.1 mouse_genomes_project 16 14852502 14853295 - Slc25a1 protein_coding retained_intron MGP_WSBEiJ_T0099189.1 MGP_WSBEiJ_G0037852.1 mouse_genomes_project 16 20417466 20417595 + Gm26447 snoRNA snoRNA MGP_WSBEiJ_T0097962.1 MGP_WSBEiJ_G0036625.1 mouse_genomes_project 16 38437392 38437486 + Gm22543 snRNA snRNA MGP_WSBEiJ_T0043267.1 MGP_WSBEiJ_G0022062.1 mouse_genomes_project 16 31531658 31554087 + MGP_WSBEiJ_P0043267 Muc13 protein_coding protein_coding MGP_WSBEiJ_T0009958.1 MGP_WSBEiJ_G0008115.1 mouse_genomes_project 16 15105674 15105756 - Mir6366 miRNA miRNA MGP_WSBEiJ_T0042177.1 MGP_WSBEiJ_G0021808.1 mouse_genomes_project 16 5473001 5503585 + MGP_WSBEiJ_P0042177 1810013L24Rik protein_coding protein_coding MGP_WSBEiJ_T0042973.1 MGP_WSBEiJ_G0021986.1 mouse_genomes_project 16 20545009 20693546 + MGP_WSBEiJ_P0042973 St6gal1 protein_coding protein_coding MGP_WSBEiJ_T0042974.1 MGP_WSBEiJ_G0021986.1 mouse_genomes_project 16 20546328 20653313 + St6gal1 protein_coding processed_transcript MGP_WSBEiJ_T0042975.1 MGP_WSBEiJ_G0021986.1 mouse_genomes_project 16 20546328 20693548 + MGP_WSBEiJ_P0042975 St6gal1 protein_coding protein_coding MGP_WSBEiJ_T0042976.1 MGP_WSBEiJ_G0021986.1 mouse_genomes_project 16 20597499 20653421 + MGP_WSBEiJ_P0042976 St6gal1 protein_coding protein_coding MGP_WSBEiJ_T0042977.1 MGP_WSBEiJ_G0021986.1 mouse_genomes_project 16 20619317 20691793 + MGP_WSBEiJ_P0042977 St6gal1 protein_coding protein_coding MGP_WSBEiJ_T0042978.1 MGP_WSBEiJ_G0021986.1 mouse_genomes_project 16 20691513 20693546 + St6gal1 protein_coding processed_transcript MGP_WSBEiJ_T0044303.1 MGP_WSBEiJ_G0022369.1 mouse_genomes_project 16 94427306 94594419 - MGP_WSBEiJ_P0044303 Hlcs protein_coding protein_coding MGP_WSBEiJ_T0044069.1 MGP_WSBEiJ_G0022311.1 mouse_genomes_project 16 89050484 89051075 - MGP_WSBEiJ_P0044069 Krtap6-5 protein_coding protein_coding MGP_WSBEiJ_T0043316.1 MGP_WSBEiJ_G0022074.1 mouse_genomes_project 16 33495238 33573230 - MGP_WSBEiJ_P0043316 Dirc2 protein_coding protein_coding MGP_WSBEiJ_T0043317.1 MGP_WSBEiJ_G0022074.1 mouse_genomes_project 16 33498753 33573204 - MGP_WSBEiJ_P0043317 Dirc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042343.1 MGP_WSBEiJ_G0021850.1 mouse_genomes_project 16 11030304 11060561 + MGP_WSBEiJ_P0042343 Nde1 protein_coding protein_coding MGP_WSBEiJ_T0042344.1 MGP_WSBEiJ_G0021850.1 mouse_genomes_project 16 11030316 11060461 + MGP_WSBEiJ_P0042344 Nde1 protein_coding protein_coding MGP_WSBEiJ_T0042345.1 MGP_WSBEiJ_G0021850.1 mouse_genomes_project 16 11030327 11060551 + MGP_WSBEiJ_P0042345 Nde1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042346.1 MGP_WSBEiJ_G0021850.1 mouse_genomes_project 16 11030333 11037799 + Nde1 protein_coding retained_intron MGP_WSBEiJ_T0042347.1 MGP_WSBEiJ_G0021850.1 mouse_genomes_project 16 11030374 11060551 + MGP_WSBEiJ_P0042347 Nde1 protein_coding protein_coding MGP_WSBEiJ_T0042348.1 MGP_WSBEiJ_G0021850.1 mouse_genomes_project 16 11030378 11058073 + Nde1 protein_coding processed_transcript MGP_WSBEiJ_T0042349.1 MGP_WSBEiJ_G0021850.1 mouse_genomes_project 16 11042852 11056032 + Nde1 protein_coding retained_intron MGP_WSBEiJ_T0042350.1 MGP_WSBEiJ_G0021850.1 mouse_genomes_project 16 11051179 11058153 + MGP_WSBEiJ_P0042350 Nde1 protein_coding protein_coding MGP_WSBEiJ_T0044255.1 MGP_WSBEiJ_G0022356.1 mouse_genomes_project 16 92461461 92478630 + MGP_WSBEiJ_P0044255 Smim11 protein_coding protein_coding MGP_WSBEiJ_T0044256.1 MGP_WSBEiJ_G0022356.1 mouse_genomes_project 16 92461471 92477013 + MGP_WSBEiJ_P0044256 Smim11 protein_coding protein_coding MGP_WSBEiJ_T0042877.1 MGP_WSBEiJ_G0021960.1 mouse_genomes_project 16 17817277 17822841 - MGP_WSBEiJ_P0042877 Thpo protein_coding protein_coding MGP_WSBEiJ_T0006778.1 MGP_WSBEiJ_G0005587.1 mouse_genomes_project 16 90792276 90795340 + lincRNA lincRNA MGP_WSBEiJ_T0042669.1 MGP_WSBEiJ_G0021916.1 mouse_genomes_project 16 15375258 15381637 - MGP_WSBEiJ_P0042669 Comt protein_coding protein_coding MGP_WSBEiJ_T0042670.1 MGP_WSBEiJ_G0021916.1 mouse_genomes_project 16 15375672 15396025 - MGP_WSBEiJ_P0042670 Comt protein_coding protein_coding MGP_WSBEiJ_T0042671.1 MGP_WSBEiJ_G0021916.1 mouse_genomes_project 16 15375686 15395558 - MGP_WSBEiJ_P0042671 Comt protein_coding protein_coding MGP_WSBEiJ_T0042672.1 MGP_WSBEiJ_G0021916.1 mouse_genomes_project 16 15378905 15381637 - MGP_WSBEiJ_P0042672 Comt protein_coding protein_coding MGP_WSBEiJ_T0043228.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30573955 30699432 + MGP_WSBEiJ_P0043228 Lrch3 protein_coding protein_coding MGP_WSBEiJ_T0043229.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30573977 30696928 + MGP_WSBEiJ_P0043229 Lrch3 protein_coding protein_coding MGP_WSBEiJ_T0043230.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30573977 30696928 + MGP_WSBEiJ_P0043230 Lrch3 protein_coding protein_coding MGP_WSBEiJ_T0043231.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30573978 30672271 + Lrch3 protein_coding retained_intron MGP_WSBEiJ_T0043232.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30573982 30657176 + MGP_WSBEiJ_P0043232 Lrch3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043233.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30573997 30696484 + MGP_WSBEiJ_P0043233 Lrch3 protein_coding protein_coding MGP_WSBEiJ_T0043234.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30573997 30696275 + MGP_WSBEiJ_P0043234 Lrch3 protein_coding protein_coding MGP_WSBEiJ_T0043235.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30635907 30644075 + Lrch3 protein_coding processed_transcript MGP_WSBEiJ_T0043236.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30662623 30681831 + MGP_WSBEiJ_P0043236 Lrch3 protein_coding protein_coding MGP_WSBEiJ_T0043237.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30662651 30681773 + MGP_WSBEiJ_P0043237 Lrch3 protein_coding protein_coding MGP_WSBEiJ_T0043238.1 MGP_WSBEiJ_G0022053.1 mouse_genomes_project 16 30669230 30681884 + MGP_WSBEiJ_P0043238 Lrch3 protein_coding protein_coding MGP_WSBEiJ_T0100593.1 MGP_WSBEiJ_G0039051.1 mouse_genomes_project 16 10776552 10779996 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0042604.1 MGP_WSBEiJ_G0021901.1 mouse_genomes_project 16 14819347 14823047 + MGP_WSBEiJ_P0042604 Tssk1 protein_coding protein_coding MGP_WSBEiJ_T0099188.1 MGP_WSBEiJ_G0037851.1 mouse_genomes_project 16 20416548 20416673 + Gm24201 snoRNA snoRNA MGP_WSBEiJ_T0043090.1 MGP_WSBEiJ_G0022023.1 mouse_genomes_project 16 28851816 28871481 - MGP_WSBEiJ_P0043090 Apod protein_coding protein_coding MGP_WSBEiJ_T0043091.1 MGP_WSBEiJ_G0022023.1 mouse_genomes_project 16 28852672 28871477 - MGP_WSBEiJ_P0043091 Apod protein_coding protein_coding MGP_WSBEiJ_T0043092.1 MGP_WSBEiJ_G0022023.1 mouse_genomes_project 16 28852706 28871267 - Apod protein_coding retained_intron MGP_WSBEiJ_T0043093.1 MGP_WSBEiJ_G0022023.1 mouse_genomes_project 16 28852968 28860068 - Apod protein_coding retained_intron MGP_WSBEiJ_T0043094.1 MGP_WSBEiJ_G0022023.1 mouse_genomes_project 16 28853061 28860301 - Apod protein_coding retained_intron MGP_WSBEiJ_T0043095.1 MGP_WSBEiJ_G0022023.1 mouse_genomes_project 16 28860127 28868021 - Apod protein_coding retained_intron MGP_WSBEiJ_T0097294.1 MGP_WSBEiJ_G0035970.1 mouse_genomes_project 16 1275538 1277274 - Gm15835 sense_intronic sense_intronic MGP_WSBEiJ_T0044043.1 MGP_WSBEiJ_G0022287.1 mouse_genomes_project 16 88586605 88588177 - MGP_WSBEiJ_P0044043 Krtap24-1 protein_coding protein_coding MGP_WSBEiJ_T0042593.1 MGP_WSBEiJ_G0021897.1 mouse_genomes_project 16 14717838 14730292 + MGP_WSBEiJ_P0042593 Scarf2 protein_coding protein_coding MGP_WSBEiJ_T0012869.1 MGP_WSBEiJ_G0010999.1 mouse_genomes_project 16 36820094 36821673 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100353.1 MGP_WSBEiJ_G0038831.1 mouse_genomes_project 16 17502464 17511726 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0099221.1 MGP_WSBEiJ_G0037884.1 mouse_genomes_project 16 77945977 77946107 - Gm25038 snoRNA snoRNA MGP_WSBEiJ_T0042465.1 MGP_WSBEiJ_G0021876.1 mouse_genomes_project 16 14021282 14023518 - MGP_WSBEiJ_P0042465 Sdf2l1 protein_coding protein_coding MGP_WSBEiJ_T0043250.1 MGP_WSBEiJ_G0022056.1 mouse_genomes_project 16 30754033 30819280 + MGP_WSBEiJ_P0043250 Lmln protein_coding protein_coding MGP_WSBEiJ_T0043251.1 MGP_WSBEiJ_G0022056.1 mouse_genomes_project 16 30783087 30796642 + Lmln protein_coding retained_intron MGP_WSBEiJ_T0043252.1 MGP_WSBEiJ_G0022056.1 mouse_genomes_project 16 30808315 30815493 + Lmln protein_coding retained_intron MGP_WSBEiJ_T0043253.1 MGP_WSBEiJ_G0022056.1 mouse_genomes_project 16 30815846 30817188 + Lmln protein_coding processed_transcript MGP_WSBEiJ_T0044000.1 MGP_WSBEiJ_G0022273.1 mouse_genomes_project 16 84776987 85012923 - MGP_WSBEiJ_P0044000 App protein_coding protein_coding MGP_WSBEiJ_T0043074.1 MGP_WSBEiJ_G0022018.1 mouse_genomes_project 16 28095876 28125544 - MGP_WSBEiJ_P0043074 Lsg1 protein_coding protein_coding MGP_WSBEiJ_T0043075.1 MGP_WSBEiJ_G0022018.1 mouse_genomes_project 16 28098639 28125541 - MGP_WSBEiJ_P0043075 Lsg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043076.1 MGP_WSBEiJ_G0022018.1 mouse_genomes_project 16 28101961 28125515 - Lsg1 protein_coding retained_intron MGP_WSBEiJ_T0043077.1 MGP_WSBEiJ_G0022018.1 mouse_genomes_project 16 28102313 28105393 - Lsg1 protein_coding retained_intron MGP_WSBEiJ_T0043078.1 MGP_WSBEiJ_G0022018.1 mouse_genomes_project 16 28105296 28125544 - Lsg1 protein_coding retained_intron MGP_WSBEiJ_T0043079.1 MGP_WSBEiJ_G0022018.1 mouse_genomes_project 16 28109321 28123605 - MGP_WSBEiJ_P0043079 Lsg1 protein_coding protein_coding MGP_WSBEiJ_T0043080.1 MGP_WSBEiJ_G0022018.1 mouse_genomes_project 16 28111258 28125526 - Lsg1 protein_coding retained_intron MGP_WSBEiJ_T0043081.1 MGP_WSBEiJ_G0022018.1 mouse_genomes_project 16 28120211 28125491 - Lsg1 protein_coding retained_intron MGP_WSBEiJ_T0043630.1 MGP_WSBEiJ_G0022149.1 mouse_genomes_project 16 43450306 43480816 + MGP_WSBEiJ_P0043630 Atg3 protein_coding protein_coding MGP_WSBEiJ_T0043631.1 MGP_WSBEiJ_G0022149.1 mouse_genomes_project 16 43457336 43480172 + Atg3 protein_coding retained_intron MGP_WSBEiJ_T0043591.1 MGP_WSBEiJ_G0022140.1 mouse_genomes_project 16 42740979 42814897 - MGP_WSBEiJ_P0043591 Boc protein_coding protein_coding MGP_WSBEiJ_T0043592.1 MGP_WSBEiJ_G0022140.1 mouse_genomes_project 16 42740983 42814924 - MGP_WSBEiJ_P0043592 Boc protein_coding protein_coding MGP_WSBEiJ_T0043593.1 MGP_WSBEiJ_G0022140.1 mouse_genomes_project 16 42741546 42814908 - MGP_WSBEiJ_P0043593 Boc protein_coding unknown_likely_coding MGP_WSBEiJ_T0042011.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 505778 508093 + MGP_WSBEiJ_P0042011 Dnase1 protein_coding protein_coding MGP_WSBEiJ_T0042012.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 505806 508861 + MGP_WSBEiJ_P0042012 Dnase1 protein_coding protein_coding MGP_WSBEiJ_T0042013.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 505809 506858 + MGP_WSBEiJ_P0042013 Dnase1 protein_coding protein_coding MGP_WSBEiJ_T0042014.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 505867 508861 + MGP_WSBEiJ_P0042014 Dnase1 protein_coding protein_coding MGP_WSBEiJ_T0042015.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 505934 508860 + Dnase1 protein_coding retained_intron MGP_WSBEiJ_T0042016.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 505937 508861 + Dnase1 protein_coding retained_intron MGP_WSBEiJ_T0042017.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 505991 508712 + MGP_WSBEiJ_P0042017 Dnase1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042018.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 506112 507097 + Dnase1 protein_coding retained_intron MGP_WSBEiJ_T0042019.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 506140 508176 + Dnase1 protein_coding retained_intron MGP_WSBEiJ_T0042020.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 507058 507708 + Dnase1 protein_coding retained_intron MGP_WSBEiJ_T0042021.1 MGP_WSBEiJ_G0021768.1 mouse_genomes_project 16 507966 508861 + MGP_WSBEiJ_P0042021 Dnase1 protein_coding protein_coding MGP_WSBEiJ_T0097957.1 MGP_WSBEiJ_G0036620.1 mouse_genomes_project 16 34345629 34345736 + Gm22349 snRNA snRNA MGP_WSBEiJ_T0006725.1 MGP_WSBEiJ_G0005547.1 mouse_genomes_project 16 7976690 7992232 + 4930509G22Rik lincRNA lincRNA MGP_WSBEiJ_T0043065.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28042224 28084654 - MGP_WSBEiJ_P0043065 Tmem44 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043066.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28043884 28084101 - Tmem44 protein_coding retained_intron MGP_WSBEiJ_T0043067.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28043884 28084725 - MGP_WSBEiJ_P0043067 Tmem44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043068.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28045725 28084733 - MGP_WSBEiJ_P0043068 Tmem44 protein_coding protein_coding MGP_WSBEiJ_T0043069.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28045727 28084733 - MGP_WSBEiJ_P0043069 Tmem44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043070.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28046004 28075331 - MGP_WSBEiJ_P0043070 Tmem44 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043071.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28050648 28084694 - Tmem44 protein_coding retained_intron MGP_WSBEiJ_T0043072.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28051029 28084997 - Tmem44 protein_coding retained_intron MGP_WSBEiJ_T0043073.1 MGP_WSBEiJ_G0022017.1 mouse_genomes_project 16 28078099 28084683 - Tmem44 protein_coding processed_transcript MGP_WSBEiJ_T0043863.1 MGP_WSBEiJ_G0022224.1 mouse_genomes_project 16 57848510 57849491 - MGP_WSBEiJ_P0043863 Olfr198 protein_coding protein_coding MGP_WSBEiJ_T0097980.1 MGP_WSBEiJ_G0036643.1 mouse_genomes_project 16 91450060 91450143 - Gm24695 snRNA snRNA MGP_WSBEiJ_T0044011.1 MGP_WSBEiJ_G0022279.1 mouse_genomes_project 16 87349886 87357039 - MGP_WSBEiJ_P0044011 Rwdd2b protein_coding protein_coding MGP_WSBEiJ_T0044012.1 MGP_WSBEiJ_G0022279.1 mouse_genomes_project 16 87353175 87357039 - Rwdd2b protein_coding processed_transcript MGP_WSBEiJ_T0042740.1 MGP_WSBEiJ_G0021934.1 mouse_genomes_project 16 16562375 16563314 - MGP_WSBEiJ_P0042740 Olfr167 protein_coding protein_coding MGP_WSBEiJ_T0042002.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 443422 453426 - MGP_WSBEiJ_P0042002 Slx4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042003.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 443440 468986 - MGP_WSBEiJ_P0042003 Slx4 protein_coding protein_coding MGP_WSBEiJ_T0042004.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 443441 459893 - MGP_WSBEiJ_P0042004 Slx4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042005.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 443445 449840 - Slx4 protein_coding retained_intron MGP_WSBEiJ_T0042006.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 443450 446523 - Slx4 protein_coding retained_intron MGP_WSBEiJ_T0042007.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 444139 471083 - MGP_WSBEiJ_P0042007 Slx4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042008.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 458942 468558 - MGP_WSBEiJ_P0042008 Slx4 protein_coding protein_coding MGP_WSBEiJ_T0042009.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 468308 471070 - MGP_WSBEiJ_P0042009 Slx4 protein_coding protein_coding MGP_WSBEiJ_T0042010.1 MGP_WSBEiJ_G0021767.1 mouse_genomes_project 16 468506 471052 - MGP_WSBEiJ_P0042010 Slx4 protein_coding protein_coding MGP_WSBEiJ_T0043102.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29233994 29451153 + MGP_WSBEiJ_P0043102 Dlg1 protein_coding protein_coding MGP_WSBEiJ_T0043103.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29234462 29449629 + MGP_WSBEiJ_P0043103 Dlg1 protein_coding protein_coding MGP_WSBEiJ_T0043104.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29234488 29451159 + MGP_WSBEiJ_P0043104 Dlg1 protein_coding protein_coding MGP_WSBEiJ_T0043105.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29234508 29451152 + MGP_WSBEiJ_P0043105 Dlg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043106.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29234592 29451149 + MGP_WSBEiJ_P0043106 Dlg1 protein_coding protein_coding MGP_WSBEiJ_T0043107.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29234703 29450467 + MGP_WSBEiJ_P0043107 Dlg1 protein_coding protein_coding MGP_WSBEiJ_T0043108.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29255556 29347005 + Dlg1 protein_coding retained_intron MGP_WSBEiJ_T0043109.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29266942 29452939 + MGP_WSBEiJ_P0043109 Dlg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043110.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29325356 29450044 + MGP_WSBEiJ_P0043110 Dlg1 protein_coding protein_coding MGP_WSBEiJ_T0043111.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29367953 29414065 + MGP_WSBEiJ_P0043111 Dlg1 protein_coding protein_coding MGP_WSBEiJ_T0043112.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29399962 29407759 + Dlg1 protein_coding retained_intron MGP_WSBEiJ_T0043113.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29407537 29434609 + MGP_WSBEiJ_P0043113 Dlg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043114.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29418569 29434564 + Dlg1 protein_coding retained_intron MGP_WSBEiJ_T0043115.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29425903 29440989 + Dlg1 protein_coding retained_intron MGP_WSBEiJ_T0043116.1 MGP_WSBEiJ_G0022025.1 mouse_genomes_project 16 29445250 29449631 + Dlg1 protein_coding retained_intron MGP_WSBEiJ_T0044060.1 MGP_WSBEiJ_G0022302.1 mouse_genomes_project 16 88878106 88878416 - MGP_WSBEiJ_P0044060 Krtap19-4 protein_coding protein_coding MGP_WSBEiJ_T0042227.1 MGP_WSBEiJ_G0021825.1 mouse_genomes_project 16 7599875 7622966 + MGP_WSBEiJ_P0042227 Rmi2 protein_coding protein_coding MGP_WSBEiJ_T0042228.1 MGP_WSBEiJ_G0021825.1 mouse_genomes_project 16 7599884 7670056 + MGP_WSBEiJ_P0042228 Rmi2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042186.1 MGP_WSBEiJ_G0021811.1 mouse_genomes_project 16 6914681 6964451 + MGP_WSBEiJ_P0042186 Atf7ip2 protein_coding protein_coding MGP_WSBEiJ_T0042187.1 MGP_WSBEiJ_G0021811.1 mouse_genomes_project 16 6914875 6955353 + MGP_WSBEiJ_P0042187 Atf7ip2 protein_coding protein_coding MGP_WSBEiJ_T0042188.1 MGP_WSBEiJ_G0021811.1 mouse_genomes_project 16 6914891 6962214 + MGP_WSBEiJ_P0042188 Atf7ip2 protein_coding protein_coding MGP_WSBEiJ_T0042189.1 MGP_WSBEiJ_G0021811.1 mouse_genomes_project 16 6914916 6937096 + Atf7ip2 protein_coding retained_intron MGP_WSBEiJ_T0042141.1 MGP_WSBEiJ_G0021800.1 mouse_genomes_project 16 5027335 5046250 - MGP_WSBEiJ_P0042141 Tmem114 protein_coding protein_coding MGP_WSBEiJ_T0100599.1 MGP_WSBEiJ_G0039057.1 mouse_genomes_project 16 57646745 57648640 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0044070.1 MGP_WSBEiJ_G0022312.1 mouse_genomes_project 16 89067946 89069000 - MGP_WSBEiJ_P0044070 1110025L11Rik protein_coding protein_coding MGP_WSBEiJ_T0097964.1 MGP_WSBEiJ_G0036627.1 mouse_genomes_project 16 44337980 44338087 - Gm24754 snRNA snRNA MGP_WSBEiJ_T0042736.1 MGP_WSBEiJ_G0021931.1 mouse_genomes_project 16 16452618 16453658 - MGP_WSBEiJ_P0042736 Olfr165 protein_coding protein_coding MGP_WSBEiJ_T0042738.1 MGP_WSBEiJ_G0021931.1 mouse_genomes_project 16 16453214 16465304 - MGP_WSBEiJ_P0042738 Olfr165 protein_coding protein_coding MGP_WSBEiJ_T0043914.1 MGP_WSBEiJ_G0022247.1 mouse_genomes_project 16 64402035 64426567 - MGP_WSBEiJ_P0043914 Chmp2b protein_coding protein_coding MGP_WSBEiJ_T0006765.1 MGP_WSBEiJ_G0005579.1 mouse_genomes_project 16 58123813 58131392 - 1700022E09Rik lincRNA lincRNA MGP_WSBEiJ_T0006766.1 MGP_WSBEiJ_G0005579.1 mouse_genomes_project 16 58127774 58131426 - 1700022E09Rik lincRNA lincRNA MGP_WSBEiJ_T0044249.1 MGP_WSBEiJ_G0022353.1 mouse_genomes_project 16 92212266 92265813 + MGP_WSBEiJ_P0044249 Mrps6 protein_coding protein_coding MGP_WSBEiJ_T0044252.1 MGP_WSBEiJ_G0022353.1 mouse_genomes_project 16 92259829 92265813 + Mrps6 protein_coding processed_transcript MGP_WSBEiJ_T0012855.1 MGP_WSBEiJ_G0010985.1 mouse_genomes_project 16 21070630 21072217 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044205.1 MGP_WSBEiJ_G0022350.1 mouse_genomes_project 16 91811540 92069168 - MGP_WSBEiJ_P0044205 Atp5o protein_coding protein_coding MGP_WSBEiJ_T0044243.1 MGP_WSBEiJ_G0022350.1 mouse_genomes_project 16 92067399 92073867 - MGP_WSBEiJ_P0044243 Atp5o protein_coding protein_coding MGP_WSBEiJ_T0044244.1 MGP_WSBEiJ_G0022350.1 mouse_genomes_project 16 92067404 92068870 - Atp5o protein_coding retained_intron MGP_WSBEiJ_T0044245.1 MGP_WSBEiJ_G0022350.1 mouse_genomes_project 16 92067406 92073728 - MGP_WSBEiJ_P0044245 Atp5o protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044246.1 MGP_WSBEiJ_G0022350.1 mouse_genomes_project 16 92067498 92073456 - Atp5o protein_coding processed_transcript MGP_WSBEiJ_T0044247.1 MGP_WSBEiJ_G0022350.1 mouse_genomes_project 16 92069044 92073600 - Atp5o protein_coding processed_transcript MGP_WSBEiJ_T0044248.1 MGP_WSBEiJ_G0022350.1 mouse_genomes_project 16 92070346 92073733 - Atp5o protein_coding retained_intron MGP_WSBEiJ_T0099190.1 MGP_WSBEiJ_G0037853.1 mouse_genomes_project 16 20417880 20418019 + Gm24616 snoRNA snoRNA MGP_WSBEiJ_T0009997.1 MGP_WSBEiJ_G0008154.1 mouse_genomes_project 16 77133918 77133989 + Mir125b-2 miRNA miRNA MGP_WSBEiJ_T0043604.1 MGP_WSBEiJ_G0022144.1 mouse_genomes_project 16 43098303 43144850 + MGP_WSBEiJ_P0043604 Cd200r4 protein_coding protein_coding MGP_WSBEiJ_T0009994.1 MGP_WSBEiJ_G0008151.1 mouse_genomes_project 16 75168620 75168730 + Gm22923 miRNA miRNA MGP_WSBEiJ_T0012829.1 MGP_WSBEiJ_G0010959.1 mouse_genomes_project 16 9584092 9585427 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100034.1 MGP_WSBEiJ_G0038664.1 mouse_genomes_project 16 76253962 76276485 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100035.1 MGP_WSBEiJ_G0038664.1 mouse_genomes_project 16 76255744 76256093 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0043083.1 MGP_WSBEiJ_G0022020.1 mouse_genomes_project 16 28506959 28640403 - MGP_WSBEiJ_P0043083 Xxylt1 protein_coding protein_coding MGP_WSBEiJ_T0043084.1 MGP_WSBEiJ_G0022020.1 mouse_genomes_project 16 28508789 28616599 - Xxylt1 protein_coding processed_transcript MGP_WSBEiJ_T0043085.1 MGP_WSBEiJ_G0022020.1 mouse_genomes_project 16 28560412 28627229 - Xxylt1 protein_coding processed_transcript MGP_WSBEiJ_T0043086.1 MGP_WSBEiJ_G0022020.1 mouse_genomes_project 16 28560454 28625238 - Xxylt1 protein_coding processed_transcript MGP_WSBEiJ_T0041959.1 MGP_WSBEiJ_G0021757.1 mouse_genomes_project 16 164779 176565 - MGP_WSBEiJ_P0041959 Mefv protein_coding protein_coding MGP_WSBEiJ_T0041960.1 MGP_WSBEiJ_G0021757.1 mouse_genomes_project 16 164779 176565 - MGP_WSBEiJ_P0041960 Mefv protein_coding protein_coding MGP_WSBEiJ_T0041961.1 MGP_WSBEiJ_G0021757.1 mouse_genomes_project 16 165588 176503 - MGP_WSBEiJ_P0041961 Mefv protein_coding unknown_likely_coding MGP_WSBEiJ_T0042706.1 MGP_WSBEiJ_G0021923.1 mouse_genomes_project 16 15794238 15795654 + MGP_WSBEiJ_P0042706 Cldn5 protein_coding protein_coding MGP_WSBEiJ_T0003606.1 MGP_WSBEiJ_G0003265.1 mouse_genomes_project 16 39569235 39589113 - Gm28750 antisense antisense MGP_WSBEiJ_T0009966.1 MGP_WSBEiJ_G0008123.1 mouse_genomes_project 16 18425299 18425353 - Mir7680 miRNA miRNA MGP_WSBEiJ_T0043909.1 MGP_WSBEiJ_G0022246.1 mouse_genomes_project 16 64381703 64395242 + MGP_WSBEiJ_P0043909 Pou1f1 protein_coding protein_coding MGP_WSBEiJ_T0043910.1 MGP_WSBEiJ_G0022246.1 mouse_genomes_project 16 64381704 64386615 + Pou1f1 protein_coding retained_intron MGP_WSBEiJ_T0043911.1 MGP_WSBEiJ_G0022246.1 mouse_genomes_project 16 64381704 64397125 + MGP_WSBEiJ_P0043911 Pou1f1 protein_coding protein_coding MGP_WSBEiJ_T0043912.1 MGP_WSBEiJ_G0022246.1 mouse_genomes_project 16 64381740 64395184 + MGP_WSBEiJ_P0043912 Pou1f1 protein_coding protein_coding MGP_WSBEiJ_T0043913.1 MGP_WSBEiJ_G0022246.1 mouse_genomes_project 16 64384349 64395051 + MGP_WSBEiJ_P0043913 Pou1f1 protein_coding protein_coding MGP_WSBEiJ_T0043785.1 MGP_WSBEiJ_G0022191.1 mouse_genomes_project 16 55308064 55335162 - MGP_WSBEiJ_P0043785 Tfg protein_coding protein_coding MGP_WSBEiJ_T0043786.1 MGP_WSBEiJ_G0022191.1 mouse_genomes_project 16 55308609 55323412 - MGP_WSBEiJ_P0043786 Tfg protein_coding protein_coding MGP_WSBEiJ_T0043787.1 MGP_WSBEiJ_G0022191.1 mouse_genomes_project 16 55308700 55322177 - MGP_WSBEiJ_P0043787 Tfg protein_coding protein_coding MGP_WSBEiJ_T0043788.1 MGP_WSBEiJ_G0022191.1 mouse_genomes_project 16 55321209 55335024 - MGP_WSBEiJ_P0043788 Tfg protein_coding protein_coding MGP_WSBEiJ_T0043789.1 MGP_WSBEiJ_G0022191.1 mouse_genomes_project 16 55322162 55330690 - MGP_WSBEiJ_P0043789 Tfg protein_coding protein_coding MGP_WSBEiJ_T0043790.1 MGP_WSBEiJ_G0022191.1 mouse_genomes_project 16 55322244 55335073 - MGP_WSBEiJ_P0043790 Tfg protein_coding protein_coding MGP_WSBEiJ_T0043791.1 MGP_WSBEiJ_G0022191.1 mouse_genomes_project 16 55323328 55334895 - MGP_WSBEiJ_P0043791 Tfg protein_coding protein_coding MGP_WSBEiJ_T0044434.1 MGP_WSBEiJ_G0022387.1 mouse_genomes_project 16 96843143 96864492 - MGP_WSBEiJ_P0044434 Itgb2l protein_coding protein_coding MGP_WSBEiJ_T0044435.1 MGP_WSBEiJ_G0022387.1 mouse_genomes_project 16 96843147 96864487 - MGP_WSBEiJ_P0044435 Itgb2l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044436.1 MGP_WSBEiJ_G0022387.1 mouse_genomes_project 16 96843231 96864485 - MGP_WSBEiJ_P0044436 Itgb2l protein_coding protein_coding MGP_WSBEiJ_T0044437.1 MGP_WSBEiJ_G0022387.1 mouse_genomes_project 16 96847586 96850001 - Itgb2l protein_coding processed_transcript MGP_WSBEiJ_T0043254.1 MGP_WSBEiJ_G0022057.1 mouse_genomes_project 16 30881022 30944810 + MGP_WSBEiJ_P0043254 Osbpl11 protein_coding protein_coding MGP_WSBEiJ_T0043832.1 MGP_WSBEiJ_G0022208.1 mouse_genomes_project 16 57342687 57349029 + MGP_WSBEiJ_P0043832 Cldnd1 protein_coding protein_coding MGP_WSBEiJ_T0043833.1 MGP_WSBEiJ_G0022208.1 mouse_genomes_project 16 57342702 57348386 + MGP_WSBEiJ_P0043833 Cldnd1 protein_coding protein_coding MGP_WSBEiJ_T0043834.1 MGP_WSBEiJ_G0022208.1 mouse_genomes_project 16 57342800 57347767 + MGP_WSBEiJ_P0043834 Cldnd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043835.1 MGP_WSBEiJ_G0022208.1 mouse_genomes_project 16 57342816 57347686 + Cldnd1 protein_coding processed_transcript MGP_WSBEiJ_T0043836.1 MGP_WSBEiJ_G0022208.1 mouse_genomes_project 16 57342825 57346157 + MGP_WSBEiJ_P0043836 Cldnd1 protein_coding protein_coding MGP_WSBEiJ_T0043837.1 MGP_WSBEiJ_G0022208.1 mouse_genomes_project 16 57347041 57347758 + Cldnd1 protein_coding retained_intron MGP_WSBEiJ_T0042477.1 MGP_WSBEiJ_G0021879.1 mouse_genomes_project 16 14042977 14100942 - MGP_WSBEiJ_P0042477 Ube2l3 protein_coding protein_coding MGP_WSBEiJ_T0042478.1 MGP_WSBEiJ_G0021879.1 mouse_genomes_project 16 14042979 14099785 - MGP_WSBEiJ_P0042478 Ube2l3 protein_coding protein_coding MGP_WSBEiJ_T0042479.1 MGP_WSBEiJ_G0021879.1 mouse_genomes_project 16 14043282 14053076 - Ube2l3 protein_coding processed_transcript MGP_WSBEiJ_T0042480.1 MGP_WSBEiJ_G0021879.1 mouse_genomes_project 16 14044274 14099787 - MGP_WSBEiJ_P0042480 Ube2l3 protein_coding protein_coding MGP_WSBEiJ_T0042481.1 MGP_WSBEiJ_G0021879.1 mouse_genomes_project 16 14050297 14099766 - Ube2l3 protein_coding retained_intron MGP_WSBEiJ_T0009995.1 MGP_WSBEiJ_G0008152.1 mouse_genomes_project 16 77085889 77085954 + Mir99a miRNA miRNA MGP_WSBEiJ_T0016908.1 MGP_WSBEiJ_G0014740.1 mouse_genomes_project 16 54545248 54560405 + Gm28037 processed_transcript processed_transcript MGP_WSBEiJ_T0043534.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42090990 42117949 - MGP_WSBEiJ_P0043534 Qtrtd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043535.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42090993 42117924 - Qtrtd1 protein_coding retained_intron MGP_WSBEiJ_T0043536.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42090993 42117961 - MGP_WSBEiJ_P0043536 Qtrtd1 protein_coding protein_coding MGP_WSBEiJ_T0043537.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42092370 42094879 - Qtrtd1 protein_coding retained_intron MGP_WSBEiJ_T0043538.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42092616 42157175 - Qtrtd1 protein_coding retained_intron MGP_WSBEiJ_T0043539.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42094830 42096719 - Qtrtd1 protein_coding retained_intron MGP_WSBEiJ_T0043540.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42096269 42117932 - Qtrtd1 protein_coding retained_intron MGP_WSBEiJ_T0043541.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42098984 42105231 - Qtrtd1 protein_coding retained_intron MGP_WSBEiJ_T0043542.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42105049 42117931 - MGP_WSBEiJ_P0043542 Qtrtd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043543.1 MGP_WSBEiJ_G0022130.1 mouse_genomes_project 16 42108571 42117932 - Qtrtd1 protein_coding retained_intron MGP_WSBEiJ_T0044280.1 MGP_WSBEiJ_G0022364.1 mouse_genomes_project 16 93974547 94078821 + MGP_WSBEiJ_P0044280 Dopey2 protein_coding protein_coding MGP_WSBEiJ_T0044281.1 MGP_WSBEiJ_G0022364.1 mouse_genomes_project 16 93974563 94078583 + MGP_WSBEiJ_P0044281 Dopey2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043902.1 MGP_WSBEiJ_G0022240.1 mouse_genomes_project 16 62323699 62664547 - MGP_WSBEiJ_P0043902 Epha3 protein_coding protein_coding MGP_WSBEiJ_T0099202.1 MGP_WSBEiJ_G0037865.1 mouse_genomes_project 16 42061812 42061941 - Gm26074 snoRNA snoRNA MGP_WSBEiJ_T0043606.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245713 43263517 + MGP_WSBEiJ_P0043606 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043607.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245713 43264203 + MGP_WSBEiJ_P0043607 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043608.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245713 43263517 + MGP_WSBEiJ_P0043608 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043609.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245713 43264910 + MGP_WSBEiJ_P0043609 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043610.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245713 43264203 + MGP_WSBEiJ_P0043610 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043611.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245727 43281113 + MGP_WSBEiJ_P0043611 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043612.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245741 43281085 + MGP_WSBEiJ_P0043612 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043613.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245777 43265125 + MGP_WSBEiJ_P0043613 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043614.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43245784 43259659 + MGP_WSBEiJ_P0043614 Cd200r3 protein_coding protein_coding MGP_WSBEiJ_T0043615.1 MGP_WSBEiJ_G0022146.1 mouse_genomes_project 16 43264088 43265689 + Cd200r3 protein_coding retained_intron MGP_WSBEiJ_T0009947.1 MGP_WSBEiJ_G0008104.1 mouse_genomes_project 16 5240656 5240764 - Gm26445 miRNA miRNA MGP_WSBEiJ_T0003602.1 MGP_WSBEiJ_G0003261.1 mouse_genomes_project 16 34850312 34866996 - 4930565N06Rik antisense antisense MGP_WSBEiJ_T0042120.1 MGP_WSBEiJ_G0021792.1 mouse_genomes_project 16 1570982 1616264 + MGP_WSBEiJ_P0042120 Ubn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044253.1 MGP_WSBEiJ_G0022355.1 mouse_genomes_project 16 92452564 92458305 + MGP_WSBEiJ_P0044253 Kcne2 protein_coding protein_coding MGP_WSBEiJ_T0044254.1 MGP_WSBEiJ_G0022355.1 mouse_genomes_project 16 92455791 92458305 + MGP_WSBEiJ_P0044254 Kcne2 protein_coding protein_coding MGP_WSBEiJ_T0043256.1 MGP_WSBEiJ_G0022059.1 mouse_genomes_project 16 31092566 31217294 + MGP_WSBEiJ_P0043256 Zfp148 protein_coding protein_coding MGP_WSBEiJ_T0012876.1 MGP_WSBEiJ_G0011006.1 mouse_genomes_project 16 43833368 43834724 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044355.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616653 95658614 + MGP_WSBEiJ_P0044355 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044356.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616653 95658026 + MGP_WSBEiJ_P0044356 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044357.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616653 95658614 + MGP_WSBEiJ_P0044357 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044358.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616653 95658614 + MGP_WSBEiJ_P0044358 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044359.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616653 95656880 + MGP_WSBEiJ_P0044359 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044360.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616746 95658663 + MGP_WSBEiJ_P0044360 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044361.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616754 95654088 + MGP_WSBEiJ_P0044361 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044362.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616754 95654423 + MGP_WSBEiJ_P0044362 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044363.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616778 95654065 + MGP_WSBEiJ_P0044363 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044364.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95616924 95658614 + MGP_WSBEiJ_P0044364 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044365.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95617048 95650219 + Kcnj15 protein_coding processed_transcript MGP_WSBEiJ_T0044366.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95617109 95658614 + MGP_WSBEiJ_P0044366 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0044367.1 MGP_WSBEiJ_G0022376.1 mouse_genomes_project 16 95638073 95650282 + MGP_WSBEiJ_P0044367 Kcnj15 protein_coding protein_coding MGP_WSBEiJ_T0012828.1 MGP_WSBEiJ_G0010958.1 mouse_genomes_project 16 8308529 8310006 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012884.1 MGP_WSBEiJ_G0011014.1 mouse_genomes_project 16 60226832 60227343 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0042147.1 MGP_WSBEiJ_G0021802.1 mouse_genomes_project 16 5123441 5239062 + MGP_WSBEiJ_P0042147 Abat protein_coding protein_coding MGP_WSBEiJ_T0042148.1 MGP_WSBEiJ_G0021802.1 mouse_genomes_project 16 5123493 5217364 + MGP_WSBEiJ_P0042148 Abat protein_coding protein_coding MGP_WSBEiJ_T0042149.1 MGP_WSBEiJ_G0021802.1 mouse_genomes_project 16 5123495 5192572 + Abat protein_coding retained_intron MGP_WSBEiJ_T0042150.1 MGP_WSBEiJ_G0021802.1 mouse_genomes_project 16 5123497 5237068 + MGP_WSBEiJ_P0042150 Abat protein_coding protein_coding MGP_WSBEiJ_T0042151.1 MGP_WSBEiJ_G0021802.1 mouse_genomes_project 16 5184779 5219983 + MGP_WSBEiJ_P0042151 Abat protein_coding protein_coding MGP_WSBEiJ_T0042152.1 MGP_WSBEiJ_G0021802.1 mouse_genomes_project 16 5195355 5217364 + MGP_WSBEiJ_P0042152 Abat protein_coding protein_coding MGP_WSBEiJ_T0042153.1 MGP_WSBEiJ_G0021802.1 mouse_genomes_project 16 5228754 5236075 + Abat protein_coding processed_transcript MGP_WSBEiJ_T0097949.1 MGP_WSBEiJ_G0036612.1 mouse_genomes_project 16 21790887 21790950 - Gm24440 snRNA snRNA MGP_WSBEiJ_T0012837.1 MGP_WSBEiJ_G0010967.1 mouse_genomes_project 16 13231849 13232823 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099200.1 MGP_WSBEiJ_G0037863.1 mouse_genomes_project 16 36208132 36208264 + Gm25617 snoRNA snoRNA MGP_WSBEiJ_T0003588.1 MGP_WSBEiJ_G0003252.1 mouse_genomes_project 16 28985238 28985654 - Gm15743 antisense antisense MGP_WSBEiJ_T0003589.1 MGP_WSBEiJ_G0003252.1 mouse_genomes_project 16 28985238 28987139 - Gm15743 antisense antisense MGP_WSBEiJ_T0096789.1 MGP_WSBEiJ_G0035470.1 mouse_genomes_project 16 48277470 48279930 + pseudogene pseudogene MGP_WSBEiJ_T0043915.1 MGP_WSBEiJ_G0022248.1 mouse_genomes_project 16 64675109 64726296 + MGP_WSBEiJ_P0043915 Vgll3 protein_coding protein_coding MGP_WSBEiJ_T0043916.1 MGP_WSBEiJ_G0022248.1 mouse_genomes_project 16 64675109 64729452 + MGP_WSBEiJ_P0043916 Vgll3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042933.1 MGP_WSBEiJ_G0021977.1 mouse_genomes_project 16 20157957 20166043 + MGP_WSBEiJ_P0042933 Ahsg protein_coding protein_coding MGP_WSBEiJ_T0042355.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11232220 11353502 + MGP_WSBEiJ_P0042355 Abcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042356.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11232220 11353502 + MGP_WSBEiJ_P0042356 Abcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042357.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11232220 11353502 + MGP_WSBEiJ_P0042357 Abcc1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042358.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11232222 11355337 + MGP_WSBEiJ_P0042358 Abcc1 protein_coding protein_coding MGP_WSBEiJ_T0042359.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11232238 11268465 + MGP_WSBEiJ_P0042359 Abcc1 protein_coding protein_coding MGP_WSBEiJ_T0042360.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11232243 11277136 + MGP_WSBEiJ_P0042360 Abcc1 protein_coding protein_coding MGP_WSBEiJ_T0042361.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11237756 11263504 + MGP_WSBEiJ_P0042361 Abcc1 protein_coding protein_coding MGP_WSBEiJ_T0042362.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11266013 11266388 + Abcc1 protein_coding processed_transcript MGP_WSBEiJ_T0042363.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11274421 11292837 + Abcc1 protein_coding retained_intron MGP_WSBEiJ_T0042364.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11340679 11347897 + Abcc1 protein_coding retained_intron MGP_WSBEiJ_T0042365.1 MGP_WSBEiJ_G0021853.1 mouse_genomes_project 16 11340684 11353642 + Abcc1 protein_coding retained_intron MGP_WSBEiJ_T0044180.1 MGP_WSBEiJ_G0022347.1 mouse_genomes_project 16 91744193 91774127 - MGP_WSBEiJ_P0044180 Gart protein_coding protein_coding MGP_WSBEiJ_T0044181.1 MGP_WSBEiJ_G0022347.1 mouse_genomes_project 16 91744400 91769294 - MGP_WSBEiJ_P0044181 Gart protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044182.1 MGP_WSBEiJ_G0022347.1 mouse_genomes_project 16 91757009 91774110 - MGP_WSBEiJ_P0044182 Gart protein_coding protein_coding MGP_WSBEiJ_T0043816.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57079467 57134256 - MGP_WSBEiJ_P0043816 St3gal6 protein_coding protein_coding MGP_WSBEiJ_T0043817.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57084680 57134480 - St3gal6 protein_coding processed_transcript MGP_WSBEiJ_T0043818.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57095261 57098268 - St3gal6 protein_coding retained_intron MGP_WSBEiJ_T0043819.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57097759 57134371 - St3gal6 protein_coding processed_transcript MGP_WSBEiJ_T0043820.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57097772 57135096 - MGP_WSBEiJ_P0043820 St3gal6 protein_coding protein_coding MGP_WSBEiJ_T0043821.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57102488 57135096 - MGP_WSBEiJ_P0043821 St3gal6 protein_coding protein_coding MGP_WSBEiJ_T0043822.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57102540 57108051 - St3gal6 protein_coding processed_transcript MGP_WSBEiJ_T0043823.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57102542 57134271 - St3gal6 protein_coding processed_transcript MGP_WSBEiJ_T0043824.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57102551 57135061 - St3gal6 protein_coding processed_transcript MGP_WSBEiJ_T0043825.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57102551 57134651 - St3gal6 protein_coding processed_transcript MGP_WSBEiJ_T0043826.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57111574 57134685 - St3gal6 protein_coding processed_transcript MGP_WSBEiJ_T0043827.1 MGP_WSBEiJ_G0022203.1 mouse_genomes_project 16 57111574 57116654 - St3gal6 protein_coding retained_intron MGP_WSBEiJ_T0096790.1 MGP_WSBEiJ_G0035471.1 mouse_genomes_project 16 57827633 57828559 - pseudogene pseudogene MGP_WSBEiJ_T0006747.1 MGP_WSBEiJ_G0005566.1 mouse_genomes_project 16 33292246 33298496 - 1600019K03Rik lincRNA lincRNA MGP_WSBEiJ_T0012889.1 MGP_WSBEiJ_G0011019.1 mouse_genomes_project 16 75558936 75559684 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012845.1 MGP_WSBEiJ_G0010975.1 mouse_genomes_project 16 16061776 16062199 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041998.1 MGP_WSBEiJ_G0021766.1 mouse_genomes_project 16 407747 440864 - MGP_WSBEiJ_P0041998 Nlrc3 protein_coding protein_coding MGP_WSBEiJ_T0041999.1 MGP_WSBEiJ_G0021766.1 mouse_genomes_project 16 408350 440951 - MGP_WSBEiJ_P0041999 Nlrc3 protein_coding protein_coding MGP_WSBEiJ_T0042000.1 MGP_WSBEiJ_G0021766.1 mouse_genomes_project 16 411322 440951 - Nlrc3 protein_coding retained_intron MGP_WSBEiJ_T0042001.1 MGP_WSBEiJ_G0021766.1 mouse_genomes_project 16 411331 427645 - Nlrc3 protein_coding retained_intron MGP_WSBEiJ_T0042775.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17394338 17492793 - MGP_WSBEiJ_P0042775 Abcc5 protein_coding protein_coding MGP_WSBEiJ_T0042776.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17394341 17492734 - MGP_WSBEiJ_P0042776 Abcc5 protein_coding protein_coding MGP_WSBEiJ_T0042777.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17394343 17466025 - Abcc5 protein_coding retained_intron MGP_WSBEiJ_T0042778.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17404532 17429611 - Abcc5 protein_coding processed_transcript MGP_WSBEiJ_T0042779.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17410215 17429805 - Abcc5 protein_coding retained_intron MGP_WSBEiJ_T0042780.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17435779 17444389 - Abcc5 protein_coding retained_intron MGP_WSBEiJ_T0042781.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17446230 17462863 - Abcc5 protein_coding retained_intron MGP_WSBEiJ_T0042782.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17459134 17492385 - MGP_WSBEiJ_P0042782 Abcc5 protein_coding protein_coding MGP_WSBEiJ_T0042783.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17465220 17466690 - Abcc5 protein_coding retained_intron MGP_WSBEiJ_T0042784.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17467163 17492723 - Abcc5 protein_coding retained_intron MGP_WSBEiJ_T0042785.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17467164 17492753 - MGP_WSBEiJ_P0042785 Abcc5 protein_coding protein_coding MGP_WSBEiJ_T0042786.1 MGP_WSBEiJ_G0021946.1 mouse_genomes_project 16 17467165 17471121 - Abcc5 protein_coding processed_transcript MGP_WSBEiJ_T0016934.1 MGP_WSBEiJ_G0014749.1 mouse_genomes_project 16 91734526 91746869 + Gm15964 processed_transcript processed_transcript MGP_WSBEiJ_T0043850.1 MGP_WSBEiJ_G0022216.1 mouse_genomes_project 16 57616820 57622052 + MGP_WSBEiJ_P0043850 Olfr183 protein_coding protein_coding MGP_WSBEiJ_T0043851.1 MGP_WSBEiJ_G0022216.1 mouse_genomes_project 16 57616839 57621588 + MGP_WSBEiJ_P0043851 Olfr183 protein_coding protein_coding MGP_WSBEiJ_T0042026.1 MGP_WSBEiJ_G0021770.1 mouse_genomes_project 16 553783 688135 - MGP_WSBEiJ_P0042026 Crebbp protein_coding protein_coding MGP_WSBEiJ_T0042027.1 MGP_WSBEiJ_G0021770.1 mouse_genomes_project 16 556156 687361 - MGP_WSBEiJ_P0042027 Crebbp protein_coding protein_coding MGP_WSBEiJ_T0042028.1 MGP_WSBEiJ_G0021770.1 mouse_genomes_project 16 559065 563510 - Crebbp protein_coding retained_intron MGP_WSBEiJ_T0042029.1 MGP_WSBEiJ_G0021770.1 mouse_genomes_project 16 561567 562362 - Crebbp protein_coding retained_intron MGP_WSBEiJ_T0042030.1 MGP_WSBEiJ_G0021770.1 mouse_genomes_project 16 562146 568386 - MGP_WSBEiJ_P0042030 Crebbp protein_coding protein_coding MGP_WSBEiJ_T0042031.1 MGP_WSBEiJ_G0021770.1 mouse_genomes_project 16 565605 600815 - MGP_WSBEiJ_P0042031 Crebbp protein_coding protein_coding MGP_WSBEiJ_T0042032.1 MGP_WSBEiJ_G0021770.1 mouse_genomes_project 16 565956 569868 - MGP_WSBEiJ_P0042032 Crebbp protein_coding protein_coding MGP_WSBEiJ_T0042033.1 MGP_WSBEiJ_G0021770.1 mouse_genomes_project 16 592673 598796 - MGP_WSBEiJ_P0042033 Crebbp protein_coding protein_coding MGP_WSBEiJ_T0016903.1 MGP_WSBEiJ_G0014738.1 mouse_genomes_project 16 30669081 30800244 - Gm17106 processed_transcript processed_transcript MGP_WSBEiJ_T0099228.1 MGP_WSBEiJ_G0037891.1 mouse_genomes_project 16 87696195 87696283 - Gm23994 snoRNA snoRNA MGP_WSBEiJ_T0043711.1 MGP_WSBEiJ_G0022173.1 mouse_genomes_project 16 47411087 47555257 + MGP_WSBEiJ_P0043711 Myh15 protein_coding protein_coding MGP_WSBEiJ_T0097933.1 MGP_WSBEiJ_G0036596.1 mouse_genomes_project 16 1587551 1587659 - Gm23483 snRNA snRNA MGP_WSBEiJ_T0043780.1 MGP_WSBEiJ_G0022190.1 mouse_genomes_project 16 55081649 55307861 + MGP_WSBEiJ_P0043780 Abi3bp protein_coding protein_coding MGP_WSBEiJ_T0043781.1 MGP_WSBEiJ_G0022190.1 mouse_genomes_project 16 55081649 55307861 + MGP_WSBEiJ_P0043781 Abi3bp protein_coding protein_coding MGP_WSBEiJ_T0043782.1 MGP_WSBEiJ_G0022190.1 mouse_genomes_project 16 55081649 55307861 + MGP_WSBEiJ_P0043782 Abi3bp protein_coding protein_coding MGP_WSBEiJ_T0043783.1 MGP_WSBEiJ_G0022190.1 mouse_genomes_project 16 55081649 55307861 + MGP_WSBEiJ_P0043783 Abi3bp protein_coding protein_coding MGP_WSBEiJ_T0043784.1 MGP_WSBEiJ_G0022190.1 mouse_genomes_project 16 55081717 55307871 + MGP_WSBEiJ_P0043784 Abi3bp protein_coding unknown_likely_coding MGP_WSBEiJ_T0043867.1 MGP_WSBEiJ_G0022228.1 mouse_genomes_project 16 57987783 57988918 - MGP_WSBEiJ_P0043867 Olfr205 protein_coding protein_coding MGP_WSBEiJ_T0006724.1 MGP_WSBEiJ_G0005546.1 mouse_genomes_project 16 7800054 7807066 + Gm4262 lincRNA lincRNA MGP_WSBEiJ_T0043157.1 MGP_WSBEiJ_G0022037.1 mouse_genomes_project 16 29841264 29853459 + Wdr53 protein_coding processed_transcript MGP_WSBEiJ_T0043158.1 MGP_WSBEiJ_G0022037.1 mouse_genomes_project 16 29841264 29853780 + MGP_WSBEiJ_P0043158 Wdr53 protein_coding protein_coding MGP_WSBEiJ_T0043159.1 MGP_WSBEiJ_G0022037.1 mouse_genomes_project 16 29841290 29853789 + MGP_WSBEiJ_P0043159 Wdr53 protein_coding protein_coding MGP_WSBEiJ_T0043160.1 MGP_WSBEiJ_G0022037.1 mouse_genomes_project 16 29841438 29847498 + Wdr53 protein_coding retained_intron MGP_WSBEiJ_T0003620.1 MGP_WSBEiJ_G0003275.1 mouse_genomes_project 16 92474342 92478057 - 1700048M11Rik antisense antisense MGP_WSBEiJ_T0042702.1 MGP_WSBEiJ_G0021921.1 mouse_genomes_project 16 15599068 15601153 - MGP_WSBEiJ_P0042702 Gp1bb protein_coding protein_coding MGP_WSBEiJ_T0042703.1 MGP_WSBEiJ_G0021921.1 mouse_genomes_project 16 15599471 15600116 - MGP_WSBEiJ_P0042703 Gp1bb protein_coding protein_coding MGP_WSBEiJ_T0044111.1 MGP_WSBEiJ_G0022331.1 mouse_genomes_project 16 90819217 90878210 - MGP_WSBEiJ_P0044111 Urb1 protein_coding protein_coding MGP_WSBEiJ_T0044112.1 MGP_WSBEiJ_G0022331.1 mouse_genomes_project 16 90835334 90841106 - Urb1 protein_coding retained_intron MGP_WSBEiJ_T0044113.1 MGP_WSBEiJ_G0022331.1 mouse_genomes_project 16 90851431 90878210 - Urb1 protein_coding retained_intron MGP_WSBEiJ_T0044114.1 MGP_WSBEiJ_G0022331.1 mouse_genomes_project 16 90867989 90878199 - Urb1 protein_coding retained_intron MGP_WSBEiJ_T0044115.1 MGP_WSBEiJ_G0022331.1 mouse_genomes_project 16 90872776 90878231 - Urb1 protein_coding retained_intron MGP_WSBEiJ_T0000939.1 MGP_WSBEiJ_G0000875.1 mouse_genomes_project 16 76959991 76960517 + TEC TEC MGP_WSBEiJ_T0012830.1 MGP_WSBEiJ_G0010960.1 mouse_genomes_project 16 10873164 10874119 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097945.1 MGP_WSBEiJ_G0036608.1 mouse_genomes_project 16 18972061 18972167 + Gm24898 snRNA snRNA MGP_WSBEiJ_T0043830.1 MGP_WSBEiJ_G0022206.1 mouse_genomes_project 16 57282929 57293218 + MGP_WSBEiJ_P0043830 Cpox protein_coding protein_coding MGP_WSBEiJ_T0006740.1 MGP_WSBEiJ_G0005559.1 mouse_genomes_project 16 22463747 22473154 + A230028O05Rik lincRNA lincRNA MGP_WSBEiJ_T0042614.1 MGP_WSBEiJ_G0021906.1 mouse_genomes_project 16 14979500 15000133 + MGP_WSBEiJ_P0042614 Dgcr6 protein_coding protein_coding MGP_WSBEiJ_T0042615.1 MGP_WSBEiJ_G0021906.1 mouse_genomes_project 16 14979516 14983200 + Dgcr6 protein_coding processed_transcript MGP_WSBEiJ_T0042616.1 MGP_WSBEiJ_G0021906.1 mouse_genomes_project 16 14979532 14995363 + Dgcr6 protein_coding processed_transcript MGP_WSBEiJ_T0042618.1 MGP_WSBEiJ_G0021906.1 mouse_genomes_project 16 14994013 15000115 + MGP_WSBEiJ_P0042618 Dgcr6 protein_coding protein_coding MGP_WSBEiJ_T0042619.1 MGP_WSBEiJ_G0021906.1 mouse_genomes_project 16 14995247 15000410 + MGP_WSBEiJ_P0042619 Dgcr6 protein_coding protein_coding MGP_WSBEiJ_T0042620.1 MGP_WSBEiJ_G0021906.1 mouse_genomes_project 16 14995297 15000131 + MGP_WSBEiJ_P0042620 Dgcr6 protein_coding protein_coding MGP_WSBEiJ_T0042621.1 MGP_WSBEiJ_G0021906.1 mouse_genomes_project 16 14995302 15000405 + MGP_WSBEiJ_P0042621 Dgcr6 protein_coding protein_coding MGP_WSBEiJ_T0042622.1 MGP_WSBEiJ_G0021906.1 mouse_genomes_project 16 14998252 15000116 + Dgcr6 protein_coding processed_transcript MGP_WSBEiJ_T0099203.1 MGP_WSBEiJ_G0037866.1 mouse_genomes_project 16 42114958 42115091 - Gm25989 snoRNA snoRNA MGP_WSBEiJ_T0006776.1 MGP_WSBEiJ_G0005586.1 mouse_genomes_project 16 90615897 90616618 + 1110008E08Rik lincRNA lincRNA MGP_WSBEiJ_T0006777.1 MGP_WSBEiJ_G0005586.1 mouse_genomes_project 16 90615897 90616620 + 1110008E08Rik lincRNA lincRNA MGP_WSBEiJ_T0003597.1 MGP_WSBEiJ_G0003258.1 mouse_genomes_project 16 31710404 31711478 + Gm15829 antisense antisense MGP_WSBEiJ_T0044085.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89804549 89874911 - MGP_WSBEiJ_P0044085 Tiam1 protein_coding protein_coding MGP_WSBEiJ_T0044086.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89804549 89997030 - MGP_WSBEiJ_P0044086 Tiam1 protein_coding protein_coding MGP_WSBEiJ_T0044087.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89804549 89984239 - MGP_WSBEiJ_P0044087 Tiam1 protein_coding protein_coding MGP_WSBEiJ_T0044088.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89804549 89997030 - MGP_WSBEiJ_P0044088 Tiam1 protein_coding protein_coding MGP_WSBEiJ_T0044089.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89804554 89815456 - MGP_WSBEiJ_P0044089 Tiam1 protein_coding protein_coding MGP_WSBEiJ_T0044090.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89805167 89835539 - MGP_WSBEiJ_P0044090 Tiam1 protein_coding protein_coding MGP_WSBEiJ_T0044091.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89805295 89855071 - Tiam1 protein_coding retained_intron MGP_WSBEiJ_T0044092.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89805859 89812707 - Tiam1 protein_coding processed_transcript MGP_WSBEiJ_T0044093.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89809105 89817398 - MGP_WSBEiJ_P0044093 Tiam1 protein_coding protein_coding MGP_WSBEiJ_T0044094.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89918134 89997030 - Tiam1 protein_coding processed_transcript MGP_WSBEiJ_T0044095.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89918175 89984149 - Tiam1 protein_coding processed_transcript MGP_WSBEiJ_T0044096.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89918245 89938099 - Tiam1 protein_coding processed_transcript MGP_WSBEiJ_T0044097.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89927342 89977815 - Tiam1 protein_coding retained_intron MGP_WSBEiJ_T0044098.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89927679 89996226 - Tiam1 protein_coding processed_transcript MGP_WSBEiJ_T0044099.1 MGP_WSBEiJ_G0022325.1 mouse_genomes_project 16 89977672 90002417 - Tiam1 protein_coding processed_transcript MGP_WSBEiJ_T0100597.1 MGP_WSBEiJ_G0039055.1 mouse_genomes_project 16 57583908 57584479 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0043932.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73212370 73756654 - MGP_WSBEiJ_P0043932 Robo2 protein_coding protein_coding MGP_WSBEiJ_T0043933.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73214419 73756957 - MGP_WSBEiJ_P0043933 Robo2 protein_coding protein_coding MGP_WSBEiJ_T0043934.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73214728 73219951 - Robo2 protein_coding retained_intron MGP_WSBEiJ_T0043935.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73215890 73756577 - MGP_WSBEiJ_P0043935 Robo2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043936.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73217095 73228661 - Robo2 protein_coding processed_transcript MGP_WSBEiJ_T0043937.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73241925 73757450 - MGP_WSBEiJ_P0043937 Robo2 protein_coding protein_coding MGP_WSBEiJ_T0043938.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73242180 73256156 - Robo2 protein_coding retained_intron MGP_WSBEiJ_T0043939.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73308368 73349616 - Robo2 protein_coding processed_transcript MGP_WSBEiJ_T0043940.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73365711 73757102 - Robo2 protein_coding retained_intron MGP_WSBEiJ_T0043941.1 MGP_WSBEiJ_G0022253.1 mouse_genomes_project 16 73694732 73757490 - Robo2 protein_coding retained_intron MGP_WSBEiJ_T0099187.1 MGP_WSBEiJ_G0037850.1 mouse_genomes_project 16 20415113 20415182 + Snord2 snoRNA snoRNA MGP_WSBEiJ_T0016898.1 MGP_WSBEiJ_G0014735.1 mouse_genomes_project 16 19794402 19796998 + Gm15651 processed_transcript processed_transcript MGP_WSBEiJ_T0042583.1 MGP_WSBEiJ_G0021895.1 mouse_genomes_project 16 14566752 14639551 - MGP_WSBEiJ_P0042583 Med15 protein_coding protein_coding MGP_WSBEiJ_T0042584.1 MGP_WSBEiJ_G0021895.1 mouse_genomes_project 16 14566752 14639551 - MGP_WSBEiJ_P0042584 Med15 protein_coding protein_coding MGP_WSBEiJ_T0042634.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15190844 15195672 + Trmt2a protein_coding retained_intron MGP_WSBEiJ_T0042635.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15191048 15195672 + MGP_WSBEiJ_P0042635 Trmt2a protein_coding protein_coding MGP_WSBEiJ_T0042636.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15191048 15196939 + MGP_WSBEiJ_P0042636 Trmt2a protein_coding protein_coding MGP_WSBEiJ_T0042637.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15191167 15195672 + Trmt2a protein_coding retained_intron MGP_WSBEiJ_T0042638.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15191174 15195678 + Trmt2a protein_coding retained_intron MGP_WSBEiJ_T0042639.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15191174 15195668 + Trmt2a protein_coding retained_intron MGP_WSBEiJ_T0042640.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15191227 15195672 + MGP_WSBEiJ_P0042640 Trmt2a protein_coding protein_coding MGP_WSBEiJ_T0042641.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15192186 15195282 + MGP_WSBEiJ_P0042641 Trmt2a protein_coding protein_coding MGP_WSBEiJ_T0042642.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15193591 15195671 + MGP_WSBEiJ_P0042642 Trmt2a protein_coding protein_coding MGP_WSBEiJ_T0042643.1 MGP_WSBEiJ_G0021912.1 mouse_genomes_project 16 15194390 15195401 + Trmt2a protein_coding retained_intron MGP_WSBEiJ_T0044377.1 MGP_WSBEiJ_G0022378.1 mouse_genomes_project 16 96073077 96093116 + MGP_WSBEiJ_P0044377 Ets2 protein_coding protein_coding MGP_WSBEiJ_T0044378.1 MGP_WSBEiJ_G0022378.1 mouse_genomes_project 16 96073457 96081265 + Ets2 protein_coding retained_intron MGP_WSBEiJ_T0044379.1 MGP_WSBEiJ_G0022378.1 mouse_genomes_project 16 96073502 96083672 + Ets2 protein_coding retained_intron MGP_WSBEiJ_T0044380.1 MGP_WSBEiJ_G0022378.1 mouse_genomes_project 16 96077308 96088175 + MGP_WSBEiJ_P0044380 Ets2 protein_coding protein_coding MGP_WSBEiJ_T0044381.1 MGP_WSBEiJ_G0022378.1 mouse_genomes_project 16 96087956 96091190 + Ets2 protein_coding retained_intron MGP_WSBEiJ_T0099198.1 MGP_WSBEiJ_G0037861.1 mouse_genomes_project 16 33525456 33525603 - Gm25967 snoRNA snoRNA MGP_WSBEiJ_T0011217.1 MGP_WSBEiJ_G0009374.1 mouse_genomes_project 16 93921606 93921884 + Gm22344 misc_RNA misc_RNA MGP_WSBEiJ_T0043007.1 MGP_WSBEiJ_G0022000.1 mouse_genomes_project 16 24009740 24156720 + MGP_WSBEiJ_P0043007 Il1rap protein_coding protein_coding MGP_WSBEiJ_T0043008.1 MGP_WSBEiJ_G0022000.1 mouse_genomes_project 16 24009778 24155810 + MGP_WSBEiJ_P0043008 Il1rap protein_coding protein_coding MGP_WSBEiJ_T0043009.1 MGP_WSBEiJ_G0022000.1 mouse_genomes_project 16 24009789 24133991 + MGP_WSBEiJ_P0043009 Il1rap protein_coding protein_coding MGP_WSBEiJ_T0043010.1 MGP_WSBEiJ_G0022000.1 mouse_genomes_project 16 24009793 24148895 + MGP_WSBEiJ_P0043010 Il1rap protein_coding protein_coding MGP_WSBEiJ_T0043011.1 MGP_WSBEiJ_G0022000.1 mouse_genomes_project 16 24054343 24146219 + MGP_WSBEiJ_P0043011 Il1rap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043012.1 MGP_WSBEiJ_G0022000.1 mouse_genomes_project 16 24153890 24161569 + MGP_WSBEiJ_P0043012 Il1rap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043013.1 MGP_WSBEiJ_G0022000.1 mouse_genomes_project 16 24158493 24159680 + Il1rap protein_coding processed_transcript MGP_WSBEiJ_T0012848.1 MGP_WSBEiJ_G0010978.1 mouse_genomes_project 16 16712497 16713004 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043865.1 MGP_WSBEiJ_G0022226.1 mouse_genomes_project 16 57912640 57913676 - MGP_WSBEiJ_P0043865 protein_coding protein_coding MGP_WSBEiJ_T0043983.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84645283 84651677 - MGP_WSBEiJ_P0043983 Atp5j protein_coding protein_coding MGP_WSBEiJ_T0043984.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84645288 84646231 - Atp5j protein_coding retained_intron MGP_WSBEiJ_T0043985.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84645288 84652941 - MGP_WSBEiJ_P0043985 Atp5j protein_coding protein_coding MGP_WSBEiJ_T0043986.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84645288 84653063 - MGP_WSBEiJ_P0043986 Atp5j protein_coding protein_coding MGP_WSBEiJ_T0043987.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84645291 84649048 - Atp5j protein_coding retained_intron MGP_WSBEiJ_T0043988.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84645856 84653040 - MGP_WSBEiJ_P0043988 Atp5j protein_coding protein_coding MGP_WSBEiJ_T0043989.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84646980 84651314 - Atp5j protein_coding processed_transcript MGP_WSBEiJ_T0043990.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84648511 84652736 - Atp5j protein_coding retained_intron MGP_WSBEiJ_T0043991.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84648769 84652593 - Atp5j protein_coding processed_transcript MGP_WSBEiJ_T0043992.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84648809 84652443 - Atp5j protein_coding processed_transcript MGP_WSBEiJ_T0043993.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84650960 84652270 - Atp5j protein_coding retained_intron MGP_WSBEiJ_T0043994.1 MGP_WSBEiJ_G0022271.1 mouse_genomes_project 16 84651713 84652967 - Atp5j protein_coding retained_intron MGP_WSBEiJ_T0043729.1 MGP_WSBEiJ_G0022178.1 mouse_genomes_project 16 50427194 50613105 + MGP_WSBEiJ_P0043729 Cblb protein_coding unknown_likely_coding MGP_WSBEiJ_T0043730.1 MGP_WSBEiJ_G0022178.1 mouse_genomes_project 16 50427273 50613098 + MGP_WSBEiJ_P0043730 Cblb protein_coding protein_coding MGP_WSBEiJ_T0042377.1 MGP_WSBEiJ_G0021860.1 mouse_genomes_project 16 12477891 12534015 + Prkdc protein_coding retained_intron MGP_WSBEiJ_T0042378.1 MGP_WSBEiJ_G0021860.1 mouse_genomes_project 16 12477914 12690339 + MGP_WSBEiJ_P0042378 Prkdc protein_coding protein_coding MGP_WSBEiJ_T0042737.1 MGP_WSBEiJ_G0021932.1 mouse_genomes_project 16 16452655 16453597 - MGP_WSBEiJ_P0042737 Olfr165 protein_coding protein_coding MGP_WSBEiJ_T0043207.1 MGP_WSBEiJ_G0022050.1 mouse_genomes_project 16 30449444 30458911 - MGP_WSBEiJ_P0043207 Gm933 protein_coding protein_coding MGP_WSBEiJ_T0044152.1 MGP_WSBEiJ_G0022339.1 mouse_genomes_project 16 91364210 91366373 + MGP_WSBEiJ_P0044152 Olig1 protein_coding protein_coding MGP_WSBEiJ_T0042142.1 MGP_WSBEiJ_G0021801.1 mouse_genomes_project 16 5084546 5103787 + MGP_WSBEiJ_P0042142 Mettl22 protein_coding protein_coding MGP_WSBEiJ_T0042143.1 MGP_WSBEiJ_G0021801.1 mouse_genomes_project 16 5084549 5101785 + MGP_WSBEiJ_P0042143 Mettl22 protein_coding protein_coding MGP_WSBEiJ_T0042144.1 MGP_WSBEiJ_G0021801.1 mouse_genomes_project 16 5084562 5097463 + MGP_WSBEiJ_P0042144 Mettl22 protein_coding protein_coding MGP_WSBEiJ_T0042145.1 MGP_WSBEiJ_G0021801.1 mouse_genomes_project 16 5098670 5101946 + Mettl22 protein_coding retained_intron MGP_WSBEiJ_T0042146.1 MGP_WSBEiJ_G0021801.1 mouse_genomes_project 16 5099938 5103299 + Mettl22 protein_coding retained_intron MGP_WSBEiJ_T0042862.1 MGP_WSBEiJ_G0021957.1 mouse_genomes_project 16 17784651 17795435 + MGP_WSBEiJ_P0042862 Fam131a protein_coding protein_coding MGP_WSBEiJ_T0042863.1 MGP_WSBEiJ_G0021957.1 mouse_genomes_project 16 17784659 17791681 + MGP_WSBEiJ_P0042863 Fam131a protein_coding protein_coding MGP_WSBEiJ_T0042864.1 MGP_WSBEiJ_G0021957.1 mouse_genomes_project 16 17787306 17795443 + MGP_WSBEiJ_P0042864 Fam131a protein_coding protein_coding MGP_WSBEiJ_T0042865.1 MGP_WSBEiJ_G0021957.1 mouse_genomes_project 16 17788573 17794054 + MGP_WSBEiJ_P0042865 Fam131a protein_coding protein_coding MGP_WSBEiJ_T0100030.1 MGP_WSBEiJ_G0038661.1 mouse_genomes_project 16 35919063 35920153 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0043754.1 MGP_WSBEiJ_G0022186.1 mouse_genomes_project 16 54587595 54608128 - MGP_WSBEiJ_P0043754 Pcnp protein_coding protein_coding MGP_WSBEiJ_T0043755.1 MGP_WSBEiJ_G0022186.1 mouse_genomes_project 16 54595852 54613196 - MGP_WSBEiJ_P0043755 Pcnp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043756.1 MGP_WSBEiJ_G0022186.1 mouse_genomes_project 16 54595852 54613239 - MGP_WSBEiJ_P0043756 Pcnp protein_coding protein_coding MGP_WSBEiJ_T0043757.1 MGP_WSBEiJ_G0022186.1 mouse_genomes_project 16 54597145 54613186 - Pcnp protein_coding processed_transcript MGP_WSBEiJ_T0043758.1 MGP_WSBEiJ_G0022186.1 mouse_genomes_project 16 54597344 54613176 - MGP_WSBEiJ_P0043758 Pcnp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043759.1 MGP_WSBEiJ_G0022186.1 mouse_genomes_project 16 54597377 54613206 - Pcnp protein_coding processed_transcript MGP_WSBEiJ_T0043760.1 MGP_WSBEiJ_G0022186.1 mouse_genomes_project 16 54597531 54608168 - MGP_WSBEiJ_P0043760 Pcnp protein_coding protein_coding MGP_WSBEiJ_T0043761.1 MGP_WSBEiJ_G0022186.1 mouse_genomes_project 16 54600537 54613196 - MGP_WSBEiJ_P0043761 Pcnp protein_coding protein_coding MGP_WSBEiJ_T0044006.1 MGP_WSBEiJ_G0022276.1 mouse_genomes_project 16 85736947 85789586 - MGP_WSBEiJ_P0044006 Adamts5 protein_coding protein_coding MGP_WSBEiJ_T0003577.1 MGP_WSBEiJ_G0003242.1 mouse_genomes_project 16 8510613 8514302 - Gm4279 antisense antisense MGP_WSBEiJ_T0041962.1 MGP_WSBEiJ_G0021758.1 mouse_genomes_project 16 206994 214490 + MGP_WSBEiJ_P0041962 Zfp263 protein_coding protein_coding MGP_WSBEiJ_T0041963.1 MGP_WSBEiJ_G0021758.1 mouse_genomes_project 16 207076 214499 + Zfp263 protein_coding retained_intron MGP_WSBEiJ_T0041964.1 MGP_WSBEiJ_G0021758.1 mouse_genomes_project 16 207083 213608 + Zfp263 protein_coding processed_transcript MGP_WSBEiJ_T0041965.1 MGP_WSBEiJ_G0021758.1 mouse_genomes_project 16 207133 214499 + MGP_WSBEiJ_P0041965 Zfp263 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041966.1 MGP_WSBEiJ_G0021758.1 mouse_genomes_project 16 207261 212995 + Zfp263 protein_coding processed_transcript MGP_WSBEiJ_T0041967.1 MGP_WSBEiJ_G0021758.1 mouse_genomes_project 16 207496 212820 + Zfp263 protein_coding processed_transcript MGP_WSBEiJ_T0041968.1 MGP_WSBEiJ_G0021758.1 mouse_genomes_project 16 211600 214493 + MGP_WSBEiJ_P0041968 Zfp263 protein_coding protein_coding MGP_WSBEiJ_T0043294.1 MGP_WSBEiJ_G0022066.1 mouse_genomes_project 16 32410242 32439855 + MGP_WSBEiJ_P0043294 Ropn1 protein_coding protein_coding MGP_WSBEiJ_T0043295.1 MGP_WSBEiJ_G0022066.1 mouse_genomes_project 16 32411509 32441274 + MGP_WSBEiJ_P0043295 Ropn1 protein_coding protein_coding MGP_WSBEiJ_T0044382.1 MGP_WSBEiJ_G0022379.1 mouse_genomes_project 16 96364224 96375796 - MGP_WSBEiJ_P0044382 Psmg1 protein_coding protein_coding MGP_WSBEiJ_T0044383.1 MGP_WSBEiJ_G0022379.1 mouse_genomes_project 16 96364328 96375726 - MGP_WSBEiJ_P0044383 Psmg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044384.1 MGP_WSBEiJ_G0022379.1 mouse_genomes_project 16 96364328 96375726 - MGP_WSBEiJ_P0044384 Psmg1 protein_coding protein_coding MGP_WSBEiJ_T0044385.1 MGP_WSBEiJ_G0022379.1 mouse_genomes_project 16 96372821 96374734 - Psmg1 protein_coding retained_intron MGP_WSBEiJ_T0099196.1 MGP_WSBEiJ_G0037859.1 mouse_genomes_project 16 29837795 29837939 - Gm25848 snoRNA snoRNA MGP_WSBEiJ_T0043342.1 MGP_WSBEiJ_G0022082.1 mouse_genomes_project 16 33899039 33920101 + MGP_WSBEiJ_P0043342 Ccdc58 protein_coding protein_coding MGP_WSBEiJ_T0043343.1 MGP_WSBEiJ_G0022082.1 mouse_genomes_project 16 33899039 33920101 + MGP_WSBEiJ_P0043343 Ccdc58 protein_coding protein_coding MGP_WSBEiJ_T0043344.1 MGP_WSBEiJ_G0022082.1 mouse_genomes_project 16 33909433 33920101 + MGP_WSBEiJ_P0043344 Ccdc58 protein_coding protein_coding MGP_WSBEiJ_T0043895.1 MGP_WSBEiJ_G0022237.1 mouse_genomes_project 16 61565393 61623437 - MGP_WSBEiJ_P0043895 Arl13b protein_coding protein_coding MGP_WSBEiJ_T0043896.1 MGP_WSBEiJ_G0022237.1 mouse_genomes_project 16 61567059 61576706 - Arl13b protein_coding processed_transcript MGP_WSBEiJ_T0043898.1 MGP_WSBEiJ_G0022237.1 mouse_genomes_project 16 61601862 61623437 - Arl13b protein_coding retained_intron MGP_WSBEiJ_T0042751.1 MGP_WSBEiJ_G0021939.1 mouse_genomes_project 16 16932245 16940125 - MGP_WSBEiJ_P0042751 A930003A15Rik protein_coding protein_coding MGP_WSBEiJ_T0043131.1 MGP_WSBEiJ_G0022031.1 mouse_genomes_project 16 29602758 29669486 - MGP_WSBEiJ_P0043131 Pak2 protein_coding protein_coding MGP_WSBEiJ_T0042221.1 MGP_WSBEiJ_G0021820.1 mouse_genomes_project 16 7552022 7552733 - MGP_WSBEiJ_P0042221 Tnp2 protein_coding protein_coding MGP_WSBEiJ_T0003613.1 MGP_WSBEiJ_G0003270.1 mouse_genomes_project 16 54552951 54554301 - Zbtb11os1 antisense antisense MGP_WSBEiJ_T0012832.1 MGP_WSBEiJ_G0010962.1 mouse_genomes_project 16 10901359 10901866 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000935.1 MGP_WSBEiJ_G0000871.1 mouse_genomes_project 16 76884929 76886203 + TEC TEC MGP_WSBEiJ_T0043356.1 MGP_WSBEiJ_G0022090.1 mouse_genomes_project 16 34555047 34622819 - MGP_WSBEiJ_P0043356 Cd86 protein_coding protein_coding MGP_WSBEiJ_T0043357.1 MGP_WSBEiJ_G0022090.1 mouse_genomes_project 16 34555075 34555696 - Cd86 protein_coding processed_transcript MGP_WSBEiJ_T0043358.1 MGP_WSBEiJ_G0022090.1 mouse_genomes_project 16 34572463 34594529 - MGP_WSBEiJ_P0043358 Cd86 protein_coding protein_coding MGP_WSBEiJ_T0043359.1 MGP_WSBEiJ_G0022090.1 mouse_genomes_project 16 34617521 34622823 - Cd86 protein_coding processed_transcript MGP_WSBEiJ_T0042770.1 MGP_WSBEiJ_G0021945.1 mouse_genomes_project 16 17369915 17386244 - protein_coding processed_transcript MGP_WSBEiJ_T0042771.1 MGP_WSBEiJ_G0021945.1 mouse_genomes_project 16 17369915 17386301 - MGP_WSBEiJ_P0042771 protein_coding protein_coding MGP_WSBEiJ_T0042772.1 MGP_WSBEiJ_G0021945.1 mouse_genomes_project 16 17371198 17375739 - protein_coding processed_transcript MGP_WSBEiJ_T0042773.1 MGP_WSBEiJ_G0021945.1 mouse_genomes_project 16 17371304 17378277 - MGP_WSBEiJ_P0042773 protein_coding protein_coding MGP_WSBEiJ_T0042774.1 MGP_WSBEiJ_G0021945.1 mouse_genomes_project 16 17376546 17377578 - protein_coding processed_transcript MGP_WSBEiJ_T0044013.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87369445 87399727 + MGP_WSBEiJ_P0044013 protein_coding protein_coding MGP_WSBEiJ_T0044014.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87369721 87399520 + MGP_WSBEiJ_P0044014 protein_coding protein_coding MGP_WSBEiJ_T0044015.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87369727 87376819 + MGP_WSBEiJ_P0044015 protein_coding protein_coding MGP_WSBEiJ_T0044016.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87369769 87376337 + protein_coding retained_intron MGP_WSBEiJ_T0044017.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87369785 87385872 + protein_coding retained_intron MGP_WSBEiJ_T0044018.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87369791 87381100 + protein_coding processed_transcript MGP_WSBEiJ_T0044019.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87369800 87399520 + MGP_WSBEiJ_P0044019 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044020.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87387701 87396121 + protein_coding retained_intron MGP_WSBEiJ_T0044021.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87397645 87399390 + protein_coding retained_intron MGP_WSBEiJ_T0044022.1 MGP_WSBEiJ_G0022280.1 mouse_genomes_project 16 87399060 87399508 + protein_coding retained_intron MGP_WSBEiJ_T0042405.1 MGP_WSBEiJ_G0021868.1 mouse_genomes_project 16 13631870 13707187 - MGP_WSBEiJ_P0042405 Spag6l protein_coding protein_coding MGP_WSBEiJ_T0042406.1 MGP_WSBEiJ_G0021868.1 mouse_genomes_project 16 13647646 13707194 - Spag6l protein_coding retained_intron MGP_WSBEiJ_T0042407.1 MGP_WSBEiJ_G0021868.1 mouse_genomes_project 16 13669649 13707155 - Spag6l protein_coding processed_transcript MGP_WSBEiJ_T0042408.1 MGP_WSBEiJ_G0021868.1 mouse_genomes_project 16 13669683 13707218 - Spag6l protein_coding processed_transcript MGP_WSBEiJ_T0042409.1 MGP_WSBEiJ_G0021868.1 mouse_genomes_project 16 13699237 13707330 - Spag6l protein_coding processed_transcript MGP_WSBEiJ_T0042410.1 MGP_WSBEiJ_G0021868.1 mouse_genomes_project 16 13699509 13707187 - Spag6l protein_coding processed_transcript MGP_WSBEiJ_T0042411.1 MGP_WSBEiJ_G0021868.1 mouse_genomes_project 16 13702834 13707181 - Spag6l protein_coding processed_transcript MGP_WSBEiJ_T0099181.1 MGP_WSBEiJ_G0037844.1 mouse_genomes_project 16 5093801 5093883 - Gm23706 snoRNA snoRNA MGP_WSBEiJ_T0043060.1 MGP_WSBEiJ_G0022016.1 mouse_genomes_project 16 27836153 27915490 - MGP_WSBEiJ_P0043060 Atp13a3 protein_coding protein_coding MGP_WSBEiJ_T0043061.1 MGP_WSBEiJ_G0022016.1 mouse_genomes_project 16 27836153 27915490 - MGP_WSBEiJ_P0043061 Atp13a3 protein_coding protein_coding MGP_WSBEiJ_T0043062.1 MGP_WSBEiJ_G0022016.1 mouse_genomes_project 16 27879158 27882177 - Atp13a3 protein_coding retained_intron MGP_WSBEiJ_T0043063.1 MGP_WSBEiJ_G0022016.1 mouse_genomes_project 16 27886571 27915445 - Atp13a3 protein_coding retained_intron MGP_WSBEiJ_T0043064.1 MGP_WSBEiJ_G0022016.1 mouse_genomes_project 16 27912852 27915797 - Atp13a3 protein_coding retained_intron MGP_WSBEiJ_T0043796.1 MGP_WSBEiJ_G0022194.1 mouse_genomes_project 16 55656273 55693940 - MGP_WSBEiJ_P0043796 Tmem45a2 protein_coding protein_coding MGP_WSBEiJ_T0041971.1 MGP_WSBEiJ_G0021761.1 mouse_genomes_project 16 314823 322308 - Zfp597 protein_coding processed_transcript MGP_WSBEiJ_T0041972.1 MGP_WSBEiJ_G0021761.1 mouse_genomes_project 16 318013 329425 - MGP_WSBEiJ_P0041972 Zfp597 protein_coding protein_coding MGP_WSBEiJ_T0041973.1 MGP_WSBEiJ_G0021761.1 mouse_genomes_project 16 318868 343757 - Zfp597 protein_coding processed_transcript MGP_WSBEiJ_T0041974.1 MGP_WSBEiJ_G0021761.1 mouse_genomes_project 16 321773 343813 - Zfp597 protein_coding processed_transcript MGP_WSBEiJ_T0041975.1 MGP_WSBEiJ_G0021761.1 mouse_genomes_project 16 323072 328758 - Zfp597 protein_coding retained_intron MGP_WSBEiJ_T0012867.1 MGP_WSBEiJ_G0010997.1 mouse_genomes_project 16 36577778 36579515 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044033.1 MGP_WSBEiJ_G0022282.1 mouse_genomes_project 16 87469655 87517183 + MGP_WSBEiJ_P0044033 Map3k7cl protein_coding protein_coding MGP_WSBEiJ_T0042596.1 MGP_WSBEiJ_G0021900.1 mouse_genomes_project 16 14764323 14816779 - protein_coding retained_intron MGP_WSBEiJ_T0042597.1 MGP_WSBEiJ_G0021900.1 mouse_genomes_project 16 14765196 14816785 - MGP_WSBEiJ_P0042597 protein_coding protein_coding MGP_WSBEiJ_T0042598.1 MGP_WSBEiJ_G0021900.1 mouse_genomes_project 16 14765196 14816818 - MGP_WSBEiJ_P0042598 protein_coding protein_coding MGP_WSBEiJ_T0042599.1 MGP_WSBEiJ_G0021900.1 mouse_genomes_project 16 14765202 14816782 - MGP_WSBEiJ_P0042599 protein_coding protein_coding MGP_WSBEiJ_T0042600.1 MGP_WSBEiJ_G0021900.1 mouse_genomes_project 16 14766151 14816718 - MGP_WSBEiJ_P0042600 protein_coding protein_coding MGP_WSBEiJ_T0042601.1 MGP_WSBEiJ_G0021900.1 mouse_genomes_project 16 14774152 14816774 - protein_coding retained_intron MGP_WSBEiJ_T0042602.1 MGP_WSBEiJ_G0021900.1 mouse_genomes_project 16 14782369 14819224 - protein_coding processed_transcript MGP_WSBEiJ_T0042603.1 MGP_WSBEiJ_G0021900.1 mouse_genomes_project 16 14817699 14819270 - protein_coding processed_transcript MGP_WSBEiJ_T0042644.1 MGP_WSBEiJ_G0021913.1 mouse_genomes_project 16 15196117 15242640 - MGP_WSBEiJ_P0042644 Dgcr8 protein_coding protein_coding MGP_WSBEiJ_T0042645.1 MGP_WSBEiJ_G0021913.1 mouse_genomes_project 16 15196126 15242643 - MGP_WSBEiJ_P0042645 Dgcr8 protein_coding protein_coding MGP_WSBEiJ_T0042646.1 MGP_WSBEiJ_G0021913.1 mouse_genomes_project 16 15219472 15235162 - Dgcr8 protein_coding retained_intron MGP_WSBEiJ_T0042647.1 MGP_WSBEiJ_G0021913.1 mouse_genomes_project 16 15219655 15230850 - Dgcr8 protein_coding retained_intron MGP_WSBEiJ_T0042648.1 MGP_WSBEiJ_G0021913.1 mouse_genomes_project 16 15238181 15239770 - Dgcr8 protein_coding processed_transcript MGP_WSBEiJ_T0097960.1 MGP_WSBEiJ_G0036623.1 mouse_genomes_project 16 36022843 36022983 + Gm25140 snRNA snRNA MGP_WSBEiJ_T0009970.1 MGP_WSBEiJ_G0008127.1 mouse_genomes_project 16 22221232 22221318 + Mir28a miRNA miRNA MGP_WSBEiJ_T0100028.1 MGP_WSBEiJ_G0038660.1 mouse_genomes_project 16 705088 706949 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100029.1 MGP_WSBEiJ_G0038660.1 mouse_genomes_project 16 706154 706842 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0042840.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17758206 17770951 + MGP_WSBEiJ_P0042840 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042841.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17758208 17770481 + MGP_WSBEiJ_P0042841 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042842.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17762941 17784262 + MGP_WSBEiJ_P0042842 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042843.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17762964 17784261 + MGP_WSBEiJ_P0042843 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042844.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17762967 17775376 + MGP_WSBEiJ_P0042844 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042845.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17762967 17784259 + MGP_WSBEiJ_P0042845 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042846.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17762973 17784261 + MGP_WSBEiJ_P0042846 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042847.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17762988 17775382 + MGP_WSBEiJ_P0042847 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042848.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17762989 17775382 + MGP_WSBEiJ_P0042848 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042849.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17763041 17784262 + MGP_WSBEiJ_P0042849 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042850.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17763041 17770827 + MGP_WSBEiJ_P0042850 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042851.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17763513 17784262 + MGP_WSBEiJ_P0042851 Eif4g1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042852.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17763616 17769354 + MGP_WSBEiJ_P0042852 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042853.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17763638 17784261 + MGP_WSBEiJ_P0042853 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042854.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17763657 17770219 + MGP_WSBEiJ_P0042854 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042855.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17763735 17784259 + MGP_WSBEiJ_P0042855 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042856.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17764032 17770215 + MGP_WSBEiJ_P0042856 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042857.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17764329 17770230 + MGP_WSBEiJ_P0042857 Eif4g1 protein_coding protein_coding MGP_WSBEiJ_T0042858.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17769831 17784259 + Eif4g1 protein_coding retained_intron MGP_WSBEiJ_T0042859.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17769961 17771141 + Eif4g1 protein_coding processed_transcript MGP_WSBEiJ_T0042860.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17772578 17773273 + Eif4g1 protein_coding retained_intron MGP_WSBEiJ_T0042861.1 MGP_WSBEiJ_G0021956.1 mouse_genomes_project 16 17780371 17781058 + Eif4g1 protein_coding retained_intron MGP_WSBEiJ_T0042225.1 MGP_WSBEiJ_G0021823.1 mouse_genomes_project 16 7560411 7560972 - MGP_WSBEiJ_P0042225 Prm1 protein_coding protein_coding MGP_WSBEiJ_T0043445.1 MGP_WSBEiJ_G0022108.1 mouse_genomes_project 16 36137716 36299947 + MGP_WSBEiJ_P0043445 Gsk3b protein_coding protein_coding MGP_WSBEiJ_T0043446.1 MGP_WSBEiJ_G0022108.1 mouse_genomes_project 16 36139003 36294644 + MGP_WSBEiJ_P0043446 Gsk3b protein_coding protein_coding MGP_WSBEiJ_T0043447.1 MGP_WSBEiJ_G0022108.1 mouse_genomes_project 16 36194284 36242846 + Gsk3b protein_coding processed_transcript MGP_WSBEiJ_T0043448.1 MGP_WSBEiJ_G0022108.1 mouse_genomes_project 16 36195240 36261791 + Gsk3b protein_coding retained_intron MGP_WSBEiJ_T0043156.1 MGP_WSBEiJ_G0022036.1 mouse_genomes_project 16 29820872 29841196 - MGP_WSBEiJ_P0043156 Fbxo45 protein_coding protein_coding MGP_WSBEiJ_T0000925.1 MGP_WSBEiJ_G0000862.1 mouse_genomes_project 16 21354104 21355830 + TEC TEC MGP_WSBEiJ_T0042190.1 MGP_WSBEiJ_G0021812.1 mouse_genomes_project 16 7011560 7044837 - MGP_WSBEiJ_P0042190 Emp2 protein_coding protein_coding MGP_WSBEiJ_T0042052.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1118445 1179115 - MGP_WSBEiJ_P0042052 Coro7 protein_coding protein_coding MGP_WSBEiJ_T0042053.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1119687 1121182 - Coro7 protein_coding processed_transcript MGP_WSBEiJ_T0042054.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1121062 1121977 - Coro7 protein_coding retained_intron MGP_WSBEiJ_T0042055.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1121369 1179016 - MGP_WSBEiJ_P0042055 Coro7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042056.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1124188 1126200 - Coro7 protein_coding retained_intron MGP_WSBEiJ_T0042057.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1124556 1127376 - Coro7 protein_coding retained_intron MGP_WSBEiJ_T0042058.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1125617 1139052 - Coro7 protein_coding processed_transcript MGP_WSBEiJ_T0042059.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1125664 1127382 - Coro7 protein_coding retained_intron MGP_WSBEiJ_T0042060.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1126938 1158795 - Coro7 protein_coding retained_intron MGP_WSBEiJ_T0042064.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1144915 1179115 - MGP_WSBEiJ_P0042064 Coro7 protein_coding protein_coding MGP_WSBEiJ_T0042065.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1157151 1179051 - Coro7 protein_coding retained_intron MGP_WSBEiJ_T0042066.1 MGP_WSBEiJ_G0021776.1 mouse_genomes_project 16 1172795 1179080 - Coro7 protein_coding retained_intron MGP_WSBEiJ_T0042756.1 MGP_WSBEiJ_G0021941.1 mouse_genomes_project 16 17149885 17180211 + MGP_WSBEiJ_P0042756 Klhl24 protein_coding protein_coding MGP_WSBEiJ_T0044010.1 MGP_WSBEiJ_G0022278.1 mouse_genomes_project 16 87281300 87349086 - MGP_WSBEiJ_P0044010 Ltn1 protein_coding protein_coding MGP_WSBEiJ_T0000946.1 MGP_WSBEiJ_G0000882.1 mouse_genomes_project 16 79234663 79235263 + TEC TEC MGP_WSBEiJ_T0043302.1 MGP_WSBEiJ_G0022071.1 mouse_genomes_project 16 33096298 33151799 - MGP_WSBEiJ_P0043302 Sec22a protein_coding protein_coding MGP_WSBEiJ_T0043303.1 MGP_WSBEiJ_G0022071.1 mouse_genomes_project 16 33099237 33134627 - Sec22a protein_coding processed_transcript MGP_WSBEiJ_T0043304.1 MGP_WSBEiJ_G0022071.1 mouse_genomes_project 16 33135798 33151696 - Sec22a protein_coding retained_intron MGP_WSBEiJ_T0043305.1 MGP_WSBEiJ_G0022071.1 mouse_genomes_project 16 33148532 33151733 - Sec22a protein_coding retained_intron MGP_WSBEiJ_T0043306.1 MGP_WSBEiJ_G0022071.1 mouse_genomes_project 16 33148904 33151728 - Sec22a protein_coding processed_transcript MGP_WSBEiJ_T0044100.1 MGP_WSBEiJ_G0022326.1 mouse_genomes_project 16 90256925 90262506 + MGP_WSBEiJ_P0044100 Sod1 protein_coding protein_coding MGP_WSBEiJ_T0043858.1 MGP_WSBEiJ_G0022220.1 mouse_genomes_project 16 57745557 57761937 - MGP_WSBEiJ_P0043858 protein_coding protein_coding MGP_WSBEiJ_T0043859.1 MGP_WSBEiJ_G0022220.1 mouse_genomes_project 16 57745557 57747458 - MGP_WSBEiJ_P0043859 protein_coding protein_coding MGP_WSBEiJ_T0099186.1 MGP_WSBEiJ_G0037849.1 mouse_genomes_project 16 17775778 17775853 + Snord66 snoRNA snoRNA MGP_WSBEiJ_T0099205.1 MGP_WSBEiJ_G0037868.1 mouse_genomes_project 16 50507655 50507788 - Gm23513 snoRNA snoRNA MGP_WSBEiJ_T0012819.1 MGP_WSBEiJ_G0010949.1 mouse_genomes_project 16 387315 387628 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0042391.1 MGP_WSBEiJ_G0021865.1 mouse_genomes_project 16 13177152 13225531 - MGP_WSBEiJ_P0042391 Dnm1l protein_coding unknown_likely_coding MGP_WSBEiJ_T0042392.1 MGP_WSBEiJ_G0021865.1 mouse_genomes_project 16 13178175 13225696 - MGP_WSBEiJ_P0042392 Dnm1l protein_coding protein_coding MGP_WSBEiJ_T0042393.1 MGP_WSBEiJ_G0021865.1 mouse_genomes_project 16 13178175 13225696 - MGP_WSBEiJ_P0042393 Dnm1l protein_coding protein_coding MGP_WSBEiJ_T0042394.1 MGP_WSBEiJ_G0021865.1 mouse_genomes_project 16 13178175 13225696 - MGP_WSBEiJ_P0042394 Dnm1l protein_coding protein_coding MGP_WSBEiJ_T0003604.1 MGP_WSBEiJ_G0003263.1 mouse_genomes_project 16 36637140 36641098 - Gm17103 antisense antisense MGP_WSBEiJ_T0043842.1 MGP_WSBEiJ_G0022212.1 mouse_genomes_project 16 57494051 57495810 - MGP_WSBEiJ_P0043842 Olfr177 protein_coding protein_coding MGP_WSBEiJ_T0043843.1 MGP_WSBEiJ_G0022212.1 mouse_genomes_project 16 57494051 57494981 - MGP_WSBEiJ_P0043843 Olfr177 protein_coding protein_coding MGP_WSBEiJ_T0097497.1 MGP_WSBEiJ_G0036162.1 mouse_genomes_project 16 92652632 92673544 + 2410124H12Rik sense_overlapping sense_overlapping MGP_WSBEiJ_T0044003.1 MGP_WSBEiJ_G0022275.1 mouse_genomes_project 16 85667196 85676475 - MGP_WSBEiJ_P0044003 Adamts1 protein_coding protein_coding MGP_WSBEiJ_T0044004.1 MGP_WSBEiJ_G0022275.1 mouse_genomes_project 16 85668839 85674834 - MGP_WSBEiJ_P0044004 Adamts1 protein_coding protein_coding MGP_WSBEiJ_T0044005.1 MGP_WSBEiJ_G0022275.1 mouse_genomes_project 16 85671594 85673002 - Adamts1 protein_coding processed_transcript MGP_WSBEiJ_T0003593.1 MGP_WSBEiJ_G0003256.1 mouse_genomes_project 16 31504960 31524319 - Gm15658 antisense antisense MGP_WSBEiJ_T0042508.1 MGP_WSBEiJ_G0021884.1 mouse_genomes_project 16 14240090 14252291 + MGP_WSBEiJ_P0042508 Serpind1 protein_coding protein_coding MGP_WSBEiJ_T0042509.1 MGP_WSBEiJ_G0021884.1 mouse_genomes_project 16 14240102 14252290 + MGP_WSBEiJ_P0042509 Serpind1 protein_coding protein_coding MGP_WSBEiJ_T0012868.1 MGP_WSBEiJ_G0010998.1 mouse_genomes_project 16 36758586 36759141 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0042914.1 MGP_WSBEiJ_G0021971.1 mouse_genomes_project 16 19472102 19494139 - MGP_WSBEiJ_P0042914 Tra2b protein_coding protein_coding MGP_WSBEiJ_T0042915.1 MGP_WSBEiJ_G0021971.1 mouse_genomes_project 16 19473591 19480575 - Tra2b protein_coding retained_intron MGP_WSBEiJ_T0042916.1 MGP_WSBEiJ_G0021971.1 mouse_genomes_project 16 19482442 19487489 - Tra2b protein_coding processed_transcript MGP_WSBEiJ_T0042917.1 MGP_WSBEiJ_G0021971.1 mouse_genomes_project 16 19485930 19494052 - Tra2b protein_coding retained_intron MGP_WSBEiJ_T0042939.1 MGP_WSBEiJ_G0021980.1 mouse_genomes_project 16 20254440 20310685 - MGP_WSBEiJ_P0042939 Kng2 protein_coding protein_coding MGP_WSBEiJ_T0042902.1 MGP_WSBEiJ_G0021967.1 mouse_genomes_project 16 19143567 19150367 - MGP_WSBEiJ_P0042902 Tmem41a protein_coding protein_coding MGP_WSBEiJ_T0042297.1 MGP_WSBEiJ_G0021840.1 mouse_genomes_project 16 10495301 10527780 + MGP_WSBEiJ_P0042297 Bfar protein_coding protein_coding MGP_WSBEiJ_T0042299.1 MGP_WSBEiJ_G0021840.1 mouse_genomes_project 16 10495393 10523457 + MGP_WSBEiJ_P0042299 Bfar protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042300.1 MGP_WSBEiJ_G0021840.1 mouse_genomes_project 16 10495463 10527770 + MGP_WSBEiJ_P0042300 Bfar protein_coding protein_coding MGP_WSBEiJ_T0042301.1 MGP_WSBEiJ_G0021840.1 mouse_genomes_project 16 10495505 10509042 + Bfar protein_coding retained_intron MGP_WSBEiJ_T0042302.1 MGP_WSBEiJ_G0021840.1 mouse_genomes_project 16 10508344 10511798 + Bfar protein_coding retained_intron MGP_WSBEiJ_T0042303.1 MGP_WSBEiJ_G0021840.1 mouse_genomes_project 16 10508656 10512229 + Bfar protein_coding retained_intron MGP_WSBEiJ_T0042304.1 MGP_WSBEiJ_G0021840.1 mouse_genomes_project 16 10516727 10521674 + Bfar protein_coding retained_intron MGP_WSBEiJ_T0042222.1 MGP_WSBEiJ_G0021821.1 mouse_genomes_project 16 7554576 7554986 - MGP_WSBEiJ_P0042222 Prm3 protein_coding protein_coding MGP_WSBEiJ_T0000141.1 MGP_WSBEiJ_G0000107.1 mouse_genomes_project 16 16317455 16317914 - MGP_WSBEiJ_P0000141 Iglv2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0000142.1 MGP_WSBEiJ_G0000107.1 mouse_genomes_project 16 16317455 16317899 - MGP_WSBEiJ_P0000142 Iglv2 IG_V_gene IG_V_gene MGP_WSBEiJ_T0042317.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10680489 10759155 - MGP_WSBEiJ_P0042317 Pdxdc1 protein_coding protein_coding MGP_WSBEiJ_T0042318.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10680919 10695590 - Pdxdc1 protein_coding processed_transcript MGP_WSBEiJ_T0042320.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10681501 10700787 - Pdxdc1 protein_coding processed_transcript MGP_WSBEiJ_T0042321.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10681506 10759049 - MGP_WSBEiJ_P0042321 Pdxdc1 protein_coding protein_coding MGP_WSBEiJ_T0042322.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10681622 10692339 - Pdxdc1 protein_coding processed_transcript MGP_WSBEiJ_T0042323.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10690849 10759010 - Pdxdc1 protein_coding retained_intron MGP_WSBEiJ_T0042324.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10691064 10694595 - Pdxdc1 protein_coding processed_transcript MGP_WSBEiJ_T0042325.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10692213 10695595 - Pdxdc1 protein_coding processed_transcript MGP_WSBEiJ_T0042326.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10692892 10693620 - Pdxdc1 protein_coding retained_intron MGP_WSBEiJ_T0042327.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10703087 10759083 - MGP_WSBEiJ_P0042327 Pdxdc1 protein_coding protein_coding MGP_WSBEiJ_T0042328.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10704653 10759159 - MGP_WSBEiJ_P0042328 Pdxdc1 protein_coding protein_coding MGP_WSBEiJ_T0042329.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10714916 10732448 - Pdxdc1 protein_coding retained_intron MGP_WSBEiJ_T0042330.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10732278 10759013 - Pdxdc1 protein_coding processed_transcript MGP_WSBEiJ_T0042331.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10737891 10759003 - Pdxdc1 protein_coding processed_transcript MGP_WSBEiJ_T0042332.1 MGP_WSBEiJ_G0021845.1 mouse_genomes_project 16 10743178 10759008 - Pdxdc1 protein_coding retained_intron MGP_WSBEiJ_T0044279.1 MGP_WSBEiJ_G0022363.1 mouse_genomes_project 16 93949437 93958556 + MGP_WSBEiJ_P0044279 Cbr3 protein_coding protein_coding MGP_WSBEiJ_T0043173.1 MGP_WSBEiJ_G0022044.1 mouse_genomes_project 16 30099535 30111642 - MGP_WSBEiJ_P0043173 Slc51a protein_coding protein_coding MGP_WSBEiJ_T0096787.1 MGP_WSBEiJ_G0035468.1 mouse_genomes_project 16 29529100 29529525 - pseudogene pseudogene MGP_WSBEiJ_T0044271.1 MGP_WSBEiJ_G0022362.1 mouse_genomes_project 16 93816379 93839199 - Setd4 protein_coding retained_intron MGP_WSBEiJ_T0044272.1 MGP_WSBEiJ_G0022362.1 mouse_genomes_project 16 93816379 93839211 - MGP_WSBEiJ_P0044272 Setd4 protein_coding protein_coding MGP_WSBEiJ_T0044273.1 MGP_WSBEiJ_G0022362.1 mouse_genomes_project 16 93816380 93822343 - Setd4 protein_coding processed_transcript MGP_WSBEiJ_T0044274.1 MGP_WSBEiJ_G0022362.1 mouse_genomes_project 16 93816382 93822965 - Setd4 protein_coding retained_intron MGP_WSBEiJ_T0044275.1 MGP_WSBEiJ_G0022362.1 mouse_genomes_project 16 93816382 93839223 - MGP_WSBEiJ_P0044275 Setd4 protein_coding protein_coding MGP_WSBEiJ_T0044276.1 MGP_WSBEiJ_G0022362.1 mouse_genomes_project 16 93824839 93832860 - Setd4 protein_coding processed_transcript MGP_WSBEiJ_T0044277.1 MGP_WSBEiJ_G0022362.1 mouse_genomes_project 16 93826369 93839471 - Setd4 protein_coding processed_transcript MGP_WSBEiJ_T0044278.1 MGP_WSBEiJ_G0022362.1 mouse_genomes_project 16 93837079 93839223 - Setd4 protein_coding processed_transcript MGP_WSBEiJ_T0003572.1 MGP_WSBEiJ_G0003238.1 mouse_genomes_project 16 501663 506356 - Gm15879 antisense antisense MGP_WSBEiJ_T0003573.1 MGP_WSBEiJ_G0003238.1 mouse_genomes_project 16 503207 506684 - Gm15879 antisense antisense MGP_WSBEiJ_T0016943.1 MGP_WSBEiJ_G0014753.1 mouse_genomes_project 16 96432770 96435424 + Gm15342 processed_transcript processed_transcript MGP_WSBEiJ_T0012872.1 MGP_WSBEiJ_G0011002.1 mouse_genomes_project 16 41401400 41402557 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0042121.1 MGP_WSBEiJ_G0021793.1 mouse_genomes_project 16 1616263 1667574 - MGP_WSBEiJ_P0042121 Ppl protein_coding protein_coding MGP_WSBEiJ_T0043259.1 MGP_WSBEiJ_G0022061.1 mouse_genomes_project 16 31414422 31453298 + Heg1 protein_coding retained_intron MGP_WSBEiJ_T0043260.1 MGP_WSBEiJ_G0022061.1 mouse_genomes_project 16 31414422 31506107 + MGP_WSBEiJ_P0043260 Heg1 protein_coding protein_coding MGP_WSBEiJ_T0043261.1 MGP_WSBEiJ_G0022061.1 mouse_genomes_project 16 31414501 31503974 + MGP_WSBEiJ_P0043261 Heg1 protein_coding protein_coding MGP_WSBEiJ_T0043262.1 MGP_WSBEiJ_G0022061.1 mouse_genomes_project 16 31414568 31506088 + MGP_WSBEiJ_P0043262 Heg1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043263.1 MGP_WSBEiJ_G0022061.1 mouse_genomes_project 16 31462786 31471461 + Heg1 protein_coding processed_transcript MGP_WSBEiJ_T0043264.1 MGP_WSBEiJ_G0022061.1 mouse_genomes_project 16 31485620 31493670 + Heg1 protein_coding retained_intron MGP_WSBEiJ_T0043265.1 MGP_WSBEiJ_G0022061.1 mouse_genomes_project 16 31487996 31503383 + Heg1 protein_coding processed_transcript MGP_WSBEiJ_T0043266.1 MGP_WSBEiJ_G0022061.1 mouse_genomes_project 16 31488969 31493516 + Heg1 protein_coding retained_intron MGP_WSBEiJ_T0043743.1 MGP_WSBEiJ_G0022183.1 mouse_genomes_project 16 54476508 54513638 - MGP_WSBEiJ_P0043743 Cep97 protein_coding protein_coding MGP_WSBEiJ_T0043744.1 MGP_WSBEiJ_G0022183.1 mouse_genomes_project 16 54502919 54513640 - MGP_WSBEiJ_P0043744 Cep97 protein_coding protein_coding MGP_WSBEiJ_T0043745.1 MGP_WSBEiJ_G0022183.1 mouse_genomes_project 16 54502926 54513697 - MGP_WSBEiJ_P0043745 Cep97 protein_coding protein_coding MGP_WSBEiJ_T0043746.1 MGP_WSBEiJ_G0022183.1 mouse_genomes_project 16 54503114 54513676 - MGP_WSBEiJ_P0043746 Cep97 protein_coding protein_coding MGP_WSBEiJ_T0043169.1 MGP_WSBEiJ_G0022043.1 mouse_genomes_project 16 30054059 30099080 + MGP_WSBEiJ_P0043169 Pcyt1a protein_coding protein_coding MGP_WSBEiJ_T0043170.1 MGP_WSBEiJ_G0022043.1 mouse_genomes_project 16 30054075 30075266 + Pcyt1a protein_coding retained_intron MGP_WSBEiJ_T0043171.1 MGP_WSBEiJ_G0022043.1 mouse_genomes_project 16 30054097 30078454 + Pcyt1a protein_coding retained_intron MGP_WSBEiJ_T0043172.1 MGP_WSBEiJ_G0022043.1 mouse_genomes_project 16 30054157 30078324 + Pcyt1a protein_coding retained_intron MGP_WSBEiJ_T0043412.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35094798 35397431 - MGP_WSBEiJ_P0043412 Stxbp5l protein_coding protein_coding MGP_WSBEiJ_T0043413.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35095124 35397431 - MGP_WSBEiJ_P0043413 Stxbp5l protein_coding protein_coding MGP_WSBEiJ_T0043414.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35095512 35397466 - MGP_WSBEiJ_P0043414 Stxbp5l protein_coding protein_coding MGP_WSBEiJ_T0043415.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35095512 35397470 - MGP_WSBEiJ_P0043415 Stxbp5l protein_coding protein_coding MGP_WSBEiJ_T0043416.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35095512 35397455 - MGP_WSBEiJ_P0043416 Stxbp5l protein_coding unknown_likely_coding MGP_WSBEiJ_T0043417.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35113641 35397431 - MGP_WSBEiJ_P0043417 Stxbp5l protein_coding protein_coding MGP_WSBEiJ_T0043418.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35136259 35187575 - Stxbp5l protein_coding processed_transcript MGP_WSBEiJ_T0043419.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35197119 35397431 - MGP_WSBEiJ_P0043419 Stxbp5l protein_coding protein_coding MGP_WSBEiJ_T0043420.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35315798 35397431 - Stxbp5l protein_coding retained_intron MGP_WSBEiJ_T0043421.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35376857 35397466 - Stxbp5l protein_coding processed_transcript MGP_WSBEiJ_T0043422.1 MGP_WSBEiJ_G0022099.1 mouse_genomes_project 16 35395344 35397431 - Stxbp5l protein_coding retained_intron MGP_WSBEiJ_T0012846.1 MGP_WSBEiJ_G0010976.1 mouse_genomes_project 16 16182266 16186922 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016910.1 MGP_WSBEiJ_G0014742.1 mouse_genomes_project 16 58225924 58269125 - Crybg3 processed_transcript processed_transcript MGP_WSBEiJ_T0044176.1 MGP_WSBEiJ_G0022346.1 mouse_genomes_project 16 91737315 91742007 - MGP_WSBEiJ_P0044176 Dnajc28 protein_coding protein_coding MGP_WSBEiJ_T0044177.1 MGP_WSBEiJ_G0022346.1 mouse_genomes_project 16 91738733 91742002 - MGP_WSBEiJ_P0044177 Dnajc28 protein_coding protein_coding MGP_WSBEiJ_T0044178.1 MGP_WSBEiJ_G0022346.1 mouse_genomes_project 16 91739844 91741999 - MGP_WSBEiJ_P0044178 Dnajc28 protein_coding protein_coding MGP_WSBEiJ_T0044179.1 MGP_WSBEiJ_G0022346.1 mouse_genomes_project 16 91740109 91742034 - MGP_WSBEiJ_P0044179 Dnajc28 protein_coding protein_coding MGP_WSBEiJ_T0006753.1 MGP_WSBEiJ_G0005572.1 mouse_genomes_project 16 47562877 47612616 - 1700026J12Rik lincRNA lincRNA MGP_WSBEiJ_T0006754.1 MGP_WSBEiJ_G0005572.1 mouse_genomes_project 16 47562904 47612616 - 1700026J12Rik lincRNA lincRNA MGP_WSBEiJ_T0044311.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94675298 94782134 + MGP_WSBEiJ_P0044311 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044312.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676125 94754572 + MGP_WSBEiJ_P0044312 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044313.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676129 94713698 + Ttc3 protein_coding retained_intron MGP_WSBEiJ_T0044314.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676129 94744123 + MGP_WSBEiJ_P0044314 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044315.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676132 94754577 + MGP_WSBEiJ_P0044315 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044316.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676135 94728567 + MGP_WSBEiJ_P0044316 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044317.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676136 94703427 + MGP_WSBEiJ_P0044317 Ttc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044318.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676137 94726235 + Ttc3 protein_coding processed_transcript MGP_WSBEiJ_T0044319.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676137 94732158 + MGP_WSBEiJ_P0044319 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044320.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676137 94728495 + MGP_WSBEiJ_P0044320 Ttc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044321.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676143 94754584 + MGP_WSBEiJ_P0044321 Ttc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044322.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676153 94719595 + Ttc3 protein_coding processed_transcript MGP_WSBEiJ_T0044323.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676153 94754574 + MGP_WSBEiJ_P0044323 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044324.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676153 94692748 + MGP_WSBEiJ_P0044324 Ttc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044325.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676153 94697332 + MGP_WSBEiJ_P0044325 Ttc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044326.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676166 94725833 + MGP_WSBEiJ_P0044326 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044327.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676167 94754584 + MGP_WSBEiJ_P0044327 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044328.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676167 94754584 + MGP_WSBEiJ_P0044328 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044329.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676182 94737747 + MGP_WSBEiJ_P0044329 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044330.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676183 94713234 + MGP_WSBEiJ_P0044330 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044331.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676183 94720740 + MGP_WSBEiJ_P0044331 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044332.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676184 94722008 + Ttc3 protein_coding processed_transcript MGP_WSBEiJ_T0044333.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676184 94703671 + MGP_WSBEiJ_P0044333 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044334.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94676209 94730154 + MGP_WSBEiJ_P0044334 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044335.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94735008 94742930 + MGP_WSBEiJ_P0044335 Ttc3 protein_coding protein_coding MGP_WSBEiJ_T0044336.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94752002 94760646 + Ttc3 protein_coding retained_intron MGP_WSBEiJ_T0044337.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94763030 94771984 + MGP_WSBEiJ_P0044337 Ttc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044338.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94769312 94780906 + Ttc3 protein_coding retained_intron MGP_WSBEiJ_T0044339.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94776985 94781797 + Ttc3 protein_coding retained_intron MGP_WSBEiJ_T0044340.1 MGP_WSBEiJ_G0022372.1 mouse_genomes_project 16 94778346 94781129 + Ttc3 protein_coding retained_intron MGP_WSBEiJ_T0042497.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14187050 14315554 - MGP_WSBEiJ_P0042497 Pi4ka protein_coding protein_coding MGP_WSBEiJ_T0042498.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14187051 14188337 - Pi4ka protein_coding retained_intron MGP_WSBEiJ_T0042499.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14187051 14191655 - Pi4ka protein_coding retained_intron MGP_WSBEiJ_T0042500.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14187051 14215863 - MGP_WSBEiJ_P0042500 Pi4ka protein_coding protein_coding MGP_WSBEiJ_T0042501.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14187051 14315133 - MGP_WSBEiJ_P0042501 Pi4ka protein_coding protein_coding MGP_WSBEiJ_T0042502.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14187052 14188767 - Pi4ka protein_coding retained_intron MGP_WSBEiJ_T0042503.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14189513 14190817 - Pi4ka protein_coding retained_intron MGP_WSBEiJ_T0042504.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14204289 14215486 - MGP_WSBEiJ_P0042504 Pi4ka protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042505.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14215974 14234158 - MGP_WSBEiJ_P0042505 Pi4ka protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042506.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14220140 14259537 - MGP_WSBEiJ_P0042506 Pi4ka protein_coding protein_coding MGP_WSBEiJ_T0042507.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14231640 14259499 - Pi4ka protein_coding retained_intron MGP_WSBEiJ_T0042510.1 MGP_WSBEiJ_G0021883.1 mouse_genomes_project 16 14273128 14315133 - Pi4ka protein_coding retained_intron MGP_WSBEiJ_T0042122.1 MGP_WSBEiJ_G0021794.1 mouse_genomes_project 16 1683502 1724718 + MGP_WSBEiJ_P0042122 Sec14l5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043000.1 MGP_WSBEiJ_G0021996.1 mouse_genomes_project 16 23391631 23541467 - MGP_WSBEiJ_P0043000 P3h2 protein_coding protein_coding MGP_WSBEiJ_T0043001.1 MGP_WSBEiJ_G0021996.1 mouse_genomes_project 16 23404603 23419530 - P3h2 protein_coding retained_intron MGP_WSBEiJ_T0043002.1 MGP_WSBEiJ_G0021996.1 mouse_genomes_project 16 23419859 23429046 - P3h2 protein_coding processed_transcript MGP_WSBEiJ_T0043457.1 MGP_WSBEiJ_G0022112.1 mouse_genomes_project 16 36407520 36422822 + MGP_WSBEiJ_P0043457 protein_coding protein_coding MGP_WSBEiJ_T0099220.1 MGP_WSBEiJ_G0037883.1 mouse_genomes_project 16 77758055 77758186 + Gm25916 snoRNA snoRNA MGP_WSBEiJ_T0043677.1 MGP_WSBEiJ_G0022161.1 mouse_genomes_project 16 44355543 44436994 - MGP_WSBEiJ_P0043677 Cd96 protein_coding protein_coding MGP_WSBEiJ_T0043318.1 MGP_WSBEiJ_G0022075.1 mouse_genomes_project 16 33574259 33634168 + MGP_WSBEiJ_P0043318 Hspbap1 protein_coding protein_coding MGP_WSBEiJ_T0044080.1 MGP_WSBEiJ_G0022320.1 mouse_genomes_project 16 89395715 89396463 - MGP_WSBEiJ_P0044080 Krtap21-1 protein_coding protein_coding MGP_WSBEiJ_T0044084.1 MGP_WSBEiJ_G0022324.1 mouse_genomes_project 16 89565346 89566353 - MGP_WSBEiJ_P0044084 Krtap11-1 protein_coding protein_coding MGP_WSBEiJ_T0100596.1 MGP_WSBEiJ_G0039054.1 mouse_genomes_project 16 33964264 33967479 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0042934.1 MGP_WSBEiJ_G0021978.1 mouse_genomes_project 16 20187474 20202362 + MGP_WSBEiJ_P0042934 Fetub protein_coding protein_coding MGP_WSBEiJ_T0042935.1 MGP_WSBEiJ_G0021978.1 mouse_genomes_project 16 20189239 20202356 + MGP_WSBEiJ_P0042935 Fetub protein_coding protein_coding MGP_WSBEiJ_T0042936.1 MGP_WSBEiJ_G0021978.1 mouse_genomes_project 16 20189327 20202362 + MGP_WSBEiJ_P0042936 Fetub protein_coding protein_coding MGP_WSBEiJ_T0042937.1 MGP_WSBEiJ_G0021978.1 mouse_genomes_project 16 20190821 20202353 + MGP_WSBEiJ_P0042937 Fetub protein_coding protein_coding MGP_WSBEiJ_T0042371.1 MGP_WSBEiJ_G0021857.1 mouse_genomes_project 16 11758137 11777071 + MGP_WSBEiJ_P0042371 Efcab1 protein_coding protein_coding MGP_WSBEiJ_T0097937.1 MGP_WSBEiJ_G0036600.1 mouse_genomes_project 16 7782737 7782921 + Gm24961 snRNA snRNA MGP_WSBEiJ_T0042095.1 MGP_WSBEiJ_G0021784.1 mouse_genomes_project 16 1394120 1449368 + MGP_WSBEiJ_P0042095 Mgrn1 protein_coding protein_coding MGP_WSBEiJ_T0042096.1 MGP_WSBEiJ_G0021784.1 mouse_genomes_project 16 1394120 1449368 + MGP_WSBEiJ_P0042096 Mgrn1 protein_coding protein_coding MGP_WSBEiJ_T0016930.1 MGP_WSBEiJ_G0014746.1 mouse_genomes_project 16 91097656 91102912 + 4930404I05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016931.1 MGP_WSBEiJ_G0014746.1 mouse_genomes_project 16 91100128 91103151 + 4930404I05Rik processed_transcript processed_transcript MGP_WSBEiJ_T0000919.1 MGP_WSBEiJ_G0000857.1 mouse_genomes_project 16 368244 368612 - TEC TEC MGP_WSBEiJ_T0000920.1 MGP_WSBEiJ_G0000857.1 mouse_genomes_project 16 368276 368612 - TEC TEC MGP_WSBEiJ_T0003622.1 MGP_WSBEiJ_G0003277.1 mouse_genomes_project 16 96484061 96491978 + 1700093J21Rik antisense antisense MGP_WSBEiJ_T0042789.1 MGP_WSBEiJ_G0021948.1 mouse_genomes_project 16 17591560 17606034 + MGP_WSBEiJ_P0042789 Dvl3 protein_coding protein_coding MGP_WSBEiJ_T0042790.1 MGP_WSBEiJ_G0021948.1 mouse_genomes_project 16 17591642 17606904 + MGP_WSBEiJ_P0042790 Dvl3 protein_coding protein_coding MGP_WSBEiJ_T0042791.1 MGP_WSBEiJ_G0021948.1 mouse_genomes_project 16 17591684 17606030 + MGP_WSBEiJ_P0042791 Dvl3 protein_coding protein_coding MGP_WSBEiJ_T0042792.1 MGP_WSBEiJ_G0021948.1 mouse_genomes_project 16 17591764 17599704 + Dvl3 protein_coding retained_intron MGP_WSBEiJ_T0042097.1 MGP_WSBEiJ_G0021785.1 mouse_genomes_project 16 1450182 1452092 + MGP_WSBEiJ_P0042097 Nudt16l1 protein_coding protein_coding MGP_WSBEiJ_T0042155.1 MGP_WSBEiJ_G0021804.1 mouse_genomes_project 16 5253581 5274214 + MGP_WSBEiJ_P0042155 Pmm2 protein_coding protein_coding MGP_WSBEiJ_T0042156.1 MGP_WSBEiJ_G0021804.1 mouse_genomes_project 16 5253630 5264986 + Pmm2 protein_coding retained_intron MGP_WSBEiJ_T0042157.1 MGP_WSBEiJ_G0021804.1 mouse_genomes_project 16 5253645 5260904 + Pmm2 protein_coding retained_intron MGP_WSBEiJ_T0042158.1 MGP_WSBEiJ_G0021804.1 mouse_genomes_project 16 5253949 5267298 + Pmm2 protein_coding processed_transcript MGP_WSBEiJ_T0042159.1 MGP_WSBEiJ_G0021804.1 mouse_genomes_project 16 5261858 5264581 + Pmm2 protein_coding retained_intron MGP_WSBEiJ_T0042160.1 MGP_WSBEiJ_G0021804.1 mouse_genomes_project 16 5264462 5273425 + Pmm2 protein_coding retained_intron MGP_WSBEiJ_T0009945.1 MGP_WSBEiJ_G0008102.1 mouse_genomes_project 16 1754613 1754699 - Mir6364 miRNA miRNA MGP_WSBEiJ_T0012823.1 MGP_WSBEiJ_G0010953.1 mouse_genomes_project 16 6756234 6757000 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043003.1 MGP_WSBEiJ_G0021997.1 mouse_genomes_project 16 23767321 23783439 - MGP_WSBEiJ_P0043003 Cldn1 protein_coding protein_coding MGP_WSBEiJ_T0044061.1 MGP_WSBEiJ_G0022303.1 mouse_genomes_project 16 88890222 88890705 - MGP_WSBEiJ_P0044061 Krtap19-5 protein_coding protein_coding MGP_WSBEiJ_T0044054.1 MGP_WSBEiJ_G0022298.1 mouse_genomes_project 16 88809780 88819124 + MGP_WSBEiJ_P0044054 Krtap15 protein_coding protein_coding MGP_WSBEiJ_T0044056.1 MGP_WSBEiJ_G0022298.1 mouse_genomes_project 16 88818633 88819484 + MGP_WSBEiJ_P0044056 Krtap15 protein_coding protein_coding MGP_WSBEiJ_T0012853.1 MGP_WSBEiJ_G0010983.1 mouse_genomes_project 16 20495977 20496437 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006720.1 MGP_WSBEiJ_G0005542.1 mouse_genomes_project 16 318868 343757 + Gm26675 lincRNA lincRNA MGP_WSBEiJ_T0003612.1 MGP_WSBEiJ_G0003269.1 mouse_genomes_project 16 48115368 48156046 - Gm15518 antisense antisense MGP_WSBEiJ_T0043792.1 MGP_WSBEiJ_G0022192.1 mouse_genomes_project 16 55343819 55419168 - MGP_WSBEiJ_P0043792 Adgrg7 protein_coding protein_coding MGP_WSBEiJ_T0042739.1 MGP_WSBEiJ_G0021933.1 mouse_genomes_project 16 16531888 16536141 + MGP_WSBEiJ_P0042739 Olfr166 protein_coding protein_coding MGP_WSBEiJ_T0042725.1 MGP_WSBEiJ_G0021928.1 mouse_genomes_project 16 15891641 15895932 - MGP_WSBEiJ_P0042725 Mrpl40 protein_coding protein_coding MGP_WSBEiJ_T0042726.1 MGP_WSBEiJ_G0021928.1 mouse_genomes_project 16 15891849 15895875 - MGP_WSBEiJ_P0042726 Mrpl40 protein_coding protein_coding MGP_WSBEiJ_T0016911.1 MGP_WSBEiJ_G0014743.1 mouse_genomes_project 16 65520502 65527966 + 1700010K23Rik processed_transcript processed_transcript MGP_WSBEiJ_T0042233.1 MGP_WSBEiJ_G0021827.1 mouse_genomes_project 16 7860906 7869613 + MGP_WSBEiJ_P0042233 Snn protein_coding protein_coding MGP_WSBEiJ_T0096983.1 MGP_WSBEiJ_G0035664.1 mouse_genomes_project 16 39365705 39365797 + Gm26381 rRNA rRNA MGP_WSBEiJ_T0000041.1 MGP_WSBEiJ_G0000034.1 mouse_genomes_project 16 16235134 16235176 - MGP_WSBEiJ_P0000041 Iglj4 IG_J_gene IG_J_gene MGP_WSBEiJ_T0042382.1 MGP_WSBEiJ_G0021862.1 mouse_genomes_project 16 12743882 13012723 - MGP_WSBEiJ_P0042382 Spidr protein_coding protein_coding MGP_WSBEiJ_T0003621.1 MGP_WSBEiJ_G0003276.1 mouse_genomes_project 16 92792922 92800144 + Gm26626 antisense antisense MGP_WSBEiJ_T0043025.1 MGP_WSBEiJ_G0022007.1 mouse_genomes_project 16 26667813 26692282 + MGP_WSBEiJ_P0043025 Hrasls protein_coding protein_coding MGP_WSBEiJ_T0043026.1 MGP_WSBEiJ_G0022007.1 mouse_genomes_project 16 26668226 26690144 + MGP_WSBEiJ_P0043026 Hrasls protein_coding protein_coding MGP_WSBEiJ_T0043027.1 MGP_WSBEiJ_G0022007.1 mouse_genomes_project 16 26668248 26689990 + Hrasls protein_coding processed_transcript MGP_WSBEiJ_T0043028.1 MGP_WSBEiJ_G0022007.1 mouse_genomes_project 16 26668288 26682253 + MGP_WSBEiJ_P0043028 Hrasls protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044305.1 MGP_WSBEiJ_G0022371.1 mouse_genomes_project 16 94669142 94676081 - MGP_WSBEiJ_P0044305 Pigp protein_coding protein_coding MGP_WSBEiJ_T0044306.1 MGP_WSBEiJ_G0022371.1 mouse_genomes_project 16 94669142 94676402 - MGP_WSBEiJ_P0044306 Pigp protein_coding protein_coding MGP_WSBEiJ_T0044307.1 MGP_WSBEiJ_G0022371.1 mouse_genomes_project 16 94669142 94676099 - MGP_WSBEiJ_P0044307 Pigp protein_coding protein_coding MGP_WSBEiJ_T0044308.1 MGP_WSBEiJ_G0022371.1 mouse_genomes_project 16 94669142 94676402 - MGP_WSBEiJ_P0044308 Pigp protein_coding protein_coding MGP_WSBEiJ_T0044309.1 MGP_WSBEiJ_G0022371.1 mouse_genomes_project 16 94669147 94670198 - Pigp protein_coding processed_transcript MGP_WSBEiJ_T0044310.1 MGP_WSBEiJ_G0022371.1 mouse_genomes_project 16 94669386 94675190 - MGP_WSBEiJ_P0044310 Pigp protein_coding protein_coding MGP_WSBEiJ_T0043132.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29675372 29690924 - MGP_WSBEiJ_P0043132 Pigx protein_coding protein_coding MGP_WSBEiJ_T0043133.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29675374 29679155 - Pigx protein_coding processed_transcript MGP_WSBEiJ_T0043134.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29675378 29690901 - Pigx protein_coding processed_transcript MGP_WSBEiJ_T0043135.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29675378 29690935 - MGP_WSBEiJ_P0043135 Pigx protein_coding protein_coding MGP_WSBEiJ_T0043136.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29675392 29690925 - MGP_WSBEiJ_P0043136 Pigx protein_coding protein_coding MGP_WSBEiJ_T0043137.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29675415 29690904 - MGP_WSBEiJ_P0043137 Pigx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043138.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29676250 29690890 - MGP_WSBEiJ_P0043138 Pigx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043139.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29678260 29690893 - MGP_WSBEiJ_P0043139 Pigx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043140.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29678466 29690897 - MGP_WSBEiJ_P0043140 Pigx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043141.1 MGP_WSBEiJ_G0022032.1 mouse_genomes_project 16 29688595 29690908 - MGP_WSBEiJ_P0043141 Pigx protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042878.1 MGP_WSBEiJ_G0021961.1 mouse_genomes_project 16 17826212 17835466 + MGP_WSBEiJ_P0042878 Chrd protein_coding protein_coding MGP_WSBEiJ_T0042879.1 MGP_WSBEiJ_G0021961.1 mouse_genomes_project 16 17826212 17831238 + MGP_WSBEiJ_P0042879 Chrd protein_coding protein_coding MGP_WSBEiJ_T0042880.1 MGP_WSBEiJ_G0021961.1 mouse_genomes_project 16 17826212 17835466 + MGP_WSBEiJ_P0042880 Chrd protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042881.1 MGP_WSBEiJ_G0021961.1 mouse_genomes_project 16 17829291 17835464 + Chrd protein_coding retained_intron MGP_WSBEiJ_T0003583.1 MGP_WSBEiJ_G0003247.1 mouse_genomes_project 16 14030621 14031430 + Gm15646 antisense antisense MGP_WSBEiJ_T0099226.1 MGP_WSBEiJ_G0037889.1 mouse_genomes_project 16 87335509 87335645 - Gm25896 snoRNA snoRNA MGP_WSBEiJ_T0042607.1 MGP_WSBEiJ_G0021904.1 mouse_genomes_project 16 14838188 14840143 - MGP_WSBEiJ_P0042607 Gsc2 protein_coding protein_coding MGP_WSBEiJ_T0099227.1 MGP_WSBEiJ_G0037890.1 mouse_genomes_project 16 87443986 87444122 - Gm24891 snoRNA snoRNA MGP_WSBEiJ_T0043583.1 MGP_WSBEiJ_G0022139.1 mouse_genomes_project 16 42642924 42652381 + Cfap44 protein_coding retained_intron MGP_WSBEiJ_T0043584.1 MGP_WSBEiJ_G0022139.1 mouse_genomes_project 16 42642927 42736907 + MGP_WSBEiJ_P0043584 Cfap44 protein_coding protein_coding MGP_WSBEiJ_T0043585.1 MGP_WSBEiJ_G0022139.1 mouse_genomes_project 16 42642950 42649438 + Cfap44 protein_coding retained_intron MGP_WSBEiJ_T0043586.1 MGP_WSBEiJ_G0022139.1 mouse_genomes_project 16 42648864 42736573 + MGP_WSBEiJ_P0043586 Cfap44 protein_coding protein_coding MGP_WSBEiJ_T0043587.1 MGP_WSBEiJ_G0022139.1 mouse_genomes_project 16 42656072 42678590 + Cfap44 protein_coding retained_intron MGP_WSBEiJ_T0043588.1 MGP_WSBEiJ_G0022139.1 mouse_genomes_project 16 42680573 42685770 + Cfap44 protein_coding processed_transcript MGP_WSBEiJ_T0043589.1 MGP_WSBEiJ_G0022139.1 mouse_genomes_project 16 42701638 42736573 + MGP_WSBEiJ_P0043589 Cfap44 protein_coding protein_coding MGP_WSBEiJ_T0043590.1 MGP_WSBEiJ_G0022139.1 mouse_genomes_project 16 42718552 42736907 + Cfap44 protein_coding retained_intron MGP_WSBEiJ_T0044258.1 MGP_WSBEiJ_G0022358.1 mouse_genomes_project 16 92513532 92528249 - MGP_WSBEiJ_P0044258 Kcne1 protein_coding protein_coding MGP_WSBEiJ_T0044259.1 MGP_WSBEiJ_G0022358.1 mouse_genomes_project 16 92517175 92527655 - MGP_WSBEiJ_P0044259 Kcne1 protein_coding protein_coding MGP_WSBEiJ_T0011203.1 MGP_WSBEiJ_G0009360.1 mouse_genomes_project 16 4817208 4817482 + Gm23476 misc_RNA misc_RNA MGP_WSBEiJ_T0042128.1 MGP_WSBEiJ_G0021797.1 mouse_genomes_project 16 1768498 1779786 + MGP_WSBEiJ_P0042128 Alg1 protein_coding protein_coding MGP_WSBEiJ_T0042129.1 MGP_WSBEiJ_G0021797.1 mouse_genomes_project 16 1768515 1774621 + Alg1 protein_coding retained_intron MGP_WSBEiJ_T0042130.1 MGP_WSBEiJ_G0021797.1 mouse_genomes_project 16 1768515 1779795 + MGP_WSBEiJ_P0042130 Alg1 protein_coding protein_coding MGP_WSBEiJ_T0042131.1 MGP_WSBEiJ_G0021797.1 mouse_genomes_project 16 1770047 1775401 + Alg1 protein_coding processed_transcript MGP_WSBEiJ_T0042132.1 MGP_WSBEiJ_G0021797.1 mouse_genomes_project 16 1774956 1778607 + Alg1 protein_coding retained_intron MGP_WSBEiJ_T0043340.1 MGP_WSBEiJ_G0022080.1 mouse_genomes_project 16 33869253 33871040 + MGP_WSBEiJ_P0043340 Wdr5b protein_coding protein_coding MGP_WSBEiJ_T0099208.1 MGP_WSBEiJ_G0037871.1 mouse_genomes_project 16 52887843 52887975 + Gm25853 snoRNA snoRNA MGP_WSBEiJ_T0043968.1 MGP_WSBEiJ_G0022265.1 mouse_genomes_project 16 78072807 78098974 - MGP_WSBEiJ_P0043968 D16Ertd472e protein_coding protein_coding MGP_WSBEiJ_T0043969.1 MGP_WSBEiJ_G0022265.1 mouse_genomes_project 16 78073484 78098974 - MGP_WSBEiJ_P0043969 D16Ertd472e protein_coding protein_coding MGP_WSBEiJ_T0043970.1 MGP_WSBEiJ_G0022265.1 mouse_genomes_project 16 78073756 78098974 - MGP_WSBEiJ_P0043970 D16Ertd472e protein_coding protein_coding MGP_WSBEiJ_T0043308.1 MGP_WSBEiJ_G0022073.1 mouse_genomes_project 16 33329196 33444239 + protein_coding retained_intron MGP_WSBEiJ_T0043309.1 MGP_WSBEiJ_G0022073.1 mouse_genomes_project 16 33329413 33464726 + MGP_WSBEiJ_P0043309 protein_coding protein_coding MGP_WSBEiJ_T0043310.1 MGP_WSBEiJ_G0022073.1 mouse_genomes_project 16 33329622 33464726 + MGP_WSBEiJ_P0043310 protein_coding protein_coding MGP_WSBEiJ_T0043311.1 MGP_WSBEiJ_G0022073.1 mouse_genomes_project 16 33456944 33457337 + protein_coding retained_intron MGP_WSBEiJ_T0043312.1 MGP_WSBEiJ_G0022073.1 mouse_genomes_project 16 33457434 33465202 + MGP_WSBEiJ_P0043312 protein_coding protein_coding MGP_WSBEiJ_T0043313.1 MGP_WSBEiJ_G0022073.1 mouse_genomes_project 16 33458284 33459130 + protein_coding retained_intron MGP_WSBEiJ_T0043314.1 MGP_WSBEiJ_G0022073.1 mouse_genomes_project 16 33461792 33463801 + MGP_WSBEiJ_P0043314 protein_coding protein_coding MGP_WSBEiJ_T0043315.1 MGP_WSBEiJ_G0022073.1 mouse_genomes_project 16 33462958 33463941 + protein_coding retained_intron MGP_WSBEiJ_T0096985.1 MGP_WSBEiJ_G0035666.1 mouse_genomes_project 16 60126495 60126613 - n-R5s37 rRNA rRNA MGP_WSBEiJ_T0042282.1 MGP_WSBEiJ_G0021835.1 mouse_genomes_project 16 8726304 8755710 + MGP_WSBEiJ_P0042282 Gm9961 protein_coding protein_coding MGP_WSBEiJ_T0006785.1 MGP_WSBEiJ_G0005592.1 mouse_genomes_project 16 96218860 96283729 - 1600002D24Rik lincRNA lincRNA MGP_WSBEiJ_T0006786.1 MGP_WSBEiJ_G0005592.1 mouse_genomes_project 16 96229569 96308550 - 1600002D24Rik lincRNA lincRNA MGP_WSBEiJ_T0042138.1 MGP_WSBEiJ_G0021799.1 mouse_genomes_project 16 3402138 4023260 + MGP_WSBEiJ_P0042138 Rbfox1 protein_coding protein_coding MGP_WSBEiJ_T0042139.1 MGP_WSBEiJ_G0021799.1 mouse_genomes_project 16 3674732 4025924 + MGP_WSBEiJ_P0042139 Rbfox1 protein_coding protein_coding MGP_WSBEiJ_T0042140.1 MGP_WSBEiJ_G0021799.1 mouse_genomes_project 16 3827955 4021156 + MGP_WSBEiJ_P0042140 Rbfox1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044346.1 MGP_WSBEiJ_G0022374.1 mouse_genomes_project 16 94887743 95016557 + MGP_WSBEiJ_P0044346 Dyrk1a protein_coding protein_coding MGP_WSBEiJ_T0044347.1 MGP_WSBEiJ_G0022374.1 mouse_genomes_project 16 94888212 95013676 + MGP_WSBEiJ_P0044347 Dyrk1a protein_coding protein_coding MGP_WSBEiJ_T0044348.1 MGP_WSBEiJ_G0022374.1 mouse_genomes_project 16 94888597 94986273 + MGP_WSBEiJ_P0044348 Dyrk1a protein_coding protein_coding MGP_WSBEiJ_T0044349.1 MGP_WSBEiJ_G0022374.1 mouse_genomes_project 16 94888640 95017007 + MGP_WSBEiJ_P0044349 Dyrk1a protein_coding protein_coding MGP_WSBEiJ_T0044350.1 MGP_WSBEiJ_G0022374.1 mouse_genomes_project 16 94888640 94989168 + MGP_WSBEiJ_P0044350 Dyrk1a protein_coding protein_coding MGP_WSBEiJ_T0044351.1 MGP_WSBEiJ_G0022374.1 mouse_genomes_project 16 94989232 94999317 + Dyrk1a protein_coding retained_intron MGP_WSBEiJ_T0041977.1 MGP_WSBEiJ_G0021763.1 mouse_genomes_project 16 343899 378934 + MGP_WSBEiJ_P0041977 Gm20695 protein_coding protein_coding MGP_WSBEiJ_T0041987.1 MGP_WSBEiJ_G0021763.1 mouse_genomes_project 16 357377 378903 + Gm20695 protein_coding processed_transcript MGP_WSBEiJ_T0042992.1 MGP_WSBEiJ_G0021995.1 mouse_genomes_project 16 23105125 23248213 + MGP_WSBEiJ_P0042992 Trp63 protein_coding protein_coding MGP_WSBEiJ_T0042993.1 MGP_WSBEiJ_G0021995.1 mouse_genomes_project 16 23105127 23321144 + MGP_WSBEiJ_P0042993 Trp63 protein_coding protein_coding MGP_WSBEiJ_T0042994.1 MGP_WSBEiJ_G0021995.1 mouse_genomes_project 16 23105127 23321129 + MGP_WSBEiJ_P0042994 Trp63 protein_coding protein_coding MGP_WSBEiJ_T0042995.1 MGP_WSBEiJ_G0021995.1 mouse_genomes_project 16 23105127 23306207 + MGP_WSBEiJ_P0042995 Trp63 protein_coding protein_coding MGP_WSBEiJ_T0042996.1 MGP_WSBEiJ_G0021995.1 mouse_genomes_project 16 23228865 23306207 + MGP_WSBEiJ_P0042996 Trp63 protein_coding protein_coding MGP_WSBEiJ_T0042997.1 MGP_WSBEiJ_G0021995.1 mouse_genomes_project 16 23228865 23321144 + MGP_WSBEiJ_P0042997 Trp63 protein_coding protein_coding MGP_WSBEiJ_T0042998.1 MGP_WSBEiJ_G0021995.1 mouse_genomes_project 16 23228865 23297088 + MGP_WSBEiJ_P0042998 Trp63 protein_coding protein_coding MGP_WSBEiJ_T0042999.1 MGP_WSBEiJ_G0021995.1 mouse_genomes_project 16 23228865 23321144 + MGP_WSBEiJ_P0042999 Trp63 protein_coding protein_coding MGP_WSBEiJ_T0044107.1 MGP_WSBEiJ_G0022330.1 mouse_genomes_project 16 90804368 90814199 + Mrap protein_coding processed_transcript MGP_WSBEiJ_T0044108.1 MGP_WSBEiJ_G0022330.1 mouse_genomes_project 16 90804368 90817511 + Mrap protein_coding processed_transcript MGP_WSBEiJ_T0044109.1 MGP_WSBEiJ_G0022330.1 mouse_genomes_project 16 90804368 90817022 + Mrap protein_coding processed_transcript MGP_WSBEiJ_T0044110.1 MGP_WSBEiJ_G0022330.1 mouse_genomes_project 16 90804368 90817511 + MGP_WSBEiJ_P0044110 Mrap protein_coding protein_coding MGP_WSBEiJ_T0044071.1 MGP_WSBEiJ_G0022313.1 mouse_genomes_project 16 89092201 89092721 + MGP_WSBEiJ_P0044071 Krtap6-3 protein_coding protein_coding MGP_WSBEiJ_T0044072.1 MGP_WSBEiJ_G0022313.1 mouse_genomes_project 16 89092277 89092721 + MGP_WSBEiJ_P0044072 Krtap6-3 protein_coding protein_coding MGP_WSBEiJ_T0043082.1 MGP_WSBEiJ_G0022019.1 mouse_genomes_project 16 28137805 28140887 + MGP_WSBEiJ_P0043082 Fam43a protein_coding protein_coding MGP_WSBEiJ_T0043903.1 MGP_WSBEiJ_G0022241.1 mouse_genomes_project 16 63299372 63300708 - MGP_WSBEiJ_P0043903 Csnka2ip protein_coding protein_coding MGP_WSBEiJ_T0042673.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395556 15448679 + MGP_WSBEiJ_P0042673 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042674.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395589 15448685 + MGP_WSBEiJ_P0042674 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042675.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395589 15448682 + MGP_WSBEiJ_P0042675 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042676.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395610 15426082 + MGP_WSBEiJ_P0042676 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042677.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395610 15448679 + MGP_WSBEiJ_P0042677 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042678.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395610 15448679 + MGP_WSBEiJ_P0042678 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042679.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395613 15448683 + MGP_WSBEiJ_P0042679 Txnrd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042680.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395617 15448682 + MGP_WSBEiJ_P0042680 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042681.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15395634 15407219 + MGP_WSBEiJ_P0042681 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042682.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15397869 15407217 + MGP_WSBEiJ_P0042682 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042683.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15398097 15412821 + MGP_WSBEiJ_P0042683 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042684.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15410415 15412064 + MGP_WSBEiJ_P0042684 Txnrd2 protein_coding protein_coding MGP_WSBEiJ_T0042685.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15421652 15444301 + Txnrd2 protein_coding processed_transcript MGP_WSBEiJ_T0042686.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15421658 15444347 + Txnrd2 protein_coding processed_transcript MGP_WSBEiJ_T0042687.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15441432 15444310 + Txnrd2 protein_coding processed_transcript MGP_WSBEiJ_T0042688.1 MGP_WSBEiJ_G0021917.1 mouse_genomes_project 16 15441462 15444299 + Txnrd2 protein_coding processed_transcript MGP_WSBEiJ_T0009946.1 MGP_WSBEiJ_G0008103.1 mouse_genomes_project 16 5240641 5240766 - Gm24462 miRNA miRNA MGP_WSBEiJ_T0043829.1 MGP_WSBEiJ_G0022205.1 mouse_genomes_project 16 57247697 57251270 - MGP_WSBEiJ_P0043829 E330017A01Rik protein_coding protein_coding MGP_WSBEiJ_T0043052.1 MGP_WSBEiJ_G0022011.1 mouse_genomes_project 16 27443657 27447496 - MGP_WSBEiJ_P0043052 Gm1968 protein_coding protein_coding MGP_WSBEiJ_T0099211.1 MGP_WSBEiJ_G0037874.1 mouse_genomes_project 16 56525763 56525895 - Gm24039 snoRNA snoRNA MGP_WSBEiJ_T0097168.1 MGP_WSBEiJ_G0035849.1 mouse_genomes_project 16 30832988 30833387 - Gm23916 ribozyme ribozyme MGP_WSBEiJ_T0009974.1 MGP_WSBEiJ_G0008131.1 mouse_genomes_project 16 30759629 30759720 + Gm22231 miRNA miRNA MGP_WSBEiJ_T0043029.1 MGP_WSBEiJ_G0022008.1 mouse_genomes_project 16 26693615 26839126 - MGP_WSBEiJ_P0043029 Atp13a5 protein_coding protein_coding MGP_WSBEiJ_T0043030.1 MGP_WSBEiJ_G0022008.1 mouse_genomes_project 16 26693678 26839100 - MGP_WSBEiJ_P0043030 Atp13a5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043031.1 MGP_WSBEiJ_G0022008.1 mouse_genomes_project 16 26694224 26839061 - MGP_WSBEiJ_P0043031 Atp13a5 protein_coding protein_coding MGP_WSBEiJ_T0043032.1 MGP_WSBEiJ_G0022008.1 mouse_genomes_project 16 26791837 26838977 - MGP_WSBEiJ_P0043032 Atp13a5 protein_coding protein_coding MGP_WSBEiJ_T0043963.1 MGP_WSBEiJ_G0022261.1 mouse_genomes_project 16 77340169 77348507 + MGP_WSBEiJ_P0043963 Gm17333 protein_coding protein_coding MGP_WSBEiJ_T0042886.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18606570 18841089 + MGP_WSBEiJ_P0042886 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042887.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18606570 18770187 + MGP_WSBEiJ_P0042887 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042888.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18606570 18841089 + MGP_WSBEiJ_P0042888 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042889.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18606621 18841089 + MGP_WSBEiJ_P0042889 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042890.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18606648 18731429 + MGP_WSBEiJ_P0042890 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042891.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18606653 18841081 + MGP_WSBEiJ_P0042891 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042892.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18606724 18618433 + MGP_WSBEiJ_P0042892 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042893.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18651873 18837981 + MGP_WSBEiJ_P0042893 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042894.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18693527 18841085 + MGP_WSBEiJ_P0042894 Vps8 protein_coding protein_coding MGP_WSBEiJ_T0042895.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18712534 18718222 + Vps8 protein_coding retained_intron MGP_WSBEiJ_T0042896.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18712604 18747229 + MGP_WSBEiJ_P0042896 Vps8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042897.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18759485 18772220 + Vps8 protein_coding retained_intron MGP_WSBEiJ_T0042898.1 MGP_WSBEiJ_G0021963.1 mouse_genomes_project 16 18815378 18840825 + Vps8 protein_coding processed_transcript MGP_WSBEiJ_T0042445.1 MGP_WSBEiJ_G0021873.1 mouse_genomes_project 16 13960595 13977614 + MGP_WSBEiJ_P0042445 Ypel1 protein_coding protein_coding MGP_WSBEiJ_T0042446.1 MGP_WSBEiJ_G0021873.1 mouse_genomes_project 16 13961057 13977219 + Ypel1 protein_coding processed_transcript MGP_WSBEiJ_T0042447.1 MGP_WSBEiJ_G0021873.1 mouse_genomes_project 16 13961097 13969528 + Ypel1 protein_coding retained_intron MGP_WSBEiJ_T0042448.1 MGP_WSBEiJ_G0021873.1 mouse_genomes_project 16 13961098 13972972 + MGP_WSBEiJ_P0042448 Ypel1 protein_coding protein_coding MGP_WSBEiJ_T0042449.1 MGP_WSBEiJ_G0021873.1 mouse_genomes_project 16 13961125 13977923 + MGP_WSBEiJ_P0042449 Ypel1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042450.1 MGP_WSBEiJ_G0021873.1 mouse_genomes_project 16 13961128 13973054 + MGP_WSBEiJ_P0042450 Ypel1 protein_coding protein_coding MGP_WSBEiJ_T0042451.1 MGP_WSBEiJ_G0021873.1 mouse_genomes_project 16 13961203 13973572 + MGP_WSBEiJ_P0042451 Ypel1 protein_coding protein_coding MGP_WSBEiJ_T0009986.1 MGP_WSBEiJ_G0008143.1 mouse_genomes_project 16 54056494 54056561 + Mir5118 miRNA miRNA MGP_WSBEiJ_T0043324.1 MGP_WSBEiJ_G0022078.1 mouse_genomes_project 16 33755972 33790536 + MGP_WSBEiJ_P0043324 Parp9 protein_coding protein_coding MGP_WSBEiJ_T0043325.1 MGP_WSBEiJ_G0022078.1 mouse_genomes_project 16 33755990 33760590 + Parp9 protein_coding retained_intron MGP_WSBEiJ_T0043326.1 MGP_WSBEiJ_G0022078.1 mouse_genomes_project 16 33756021 33766039 + MGP_WSBEiJ_P0043326 Parp9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043327.1 MGP_WSBEiJ_G0022078.1 mouse_genomes_project 16 33756138 33794920 + MGP_WSBEiJ_P0043327 Parp9 protein_coding protein_coding MGP_WSBEiJ_T0043328.1 MGP_WSBEiJ_G0022078.1 mouse_genomes_project 16 33757780 33766274 + Parp9 protein_coding processed_transcript MGP_WSBEiJ_T0043329.1 MGP_WSBEiJ_G0022078.1 mouse_genomes_project 16 33766636 33779434 + MGP_WSBEiJ_P0043329 Parp9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043955.1 MGP_WSBEiJ_G0022258.1 mouse_genomes_project 16 75705989 75796104 - MGP_WSBEiJ_P0043955 Nrip1 protein_coding protein_coding MGP_WSBEiJ_T0043956.1 MGP_WSBEiJ_G0022258.1 mouse_genomes_project 16 75709450 75795325 - MGP_WSBEiJ_P0043956 Nrip1 protein_coding protein_coding MGP_WSBEiJ_T0043957.1 MGP_WSBEiJ_G0022258.1 mouse_genomes_project 16 75713234 75743590 - MGP_WSBEiJ_P0043957 Nrip1 protein_coding protein_coding MGP_WSBEiJ_T0043958.1 MGP_WSBEiJ_G0022258.1 mouse_genomes_project 16 75749330 75795313 - Nrip1 protein_coding retained_intron MGP_WSBEiJ_T0043959.1 MGP_WSBEiJ_G0022258.1 mouse_genomes_project 16 75749543 75795316 - Nrip1 protein_coding retained_intron MGP_WSBEiJ_T0043960.1 MGP_WSBEiJ_G0022258.1 mouse_genomes_project 16 75772586 75795325 - Nrip1 protein_coding retained_intron MGP_WSBEiJ_T0044297.1 MGP_WSBEiJ_G0022367.1 mouse_genomes_project 16 94200429 94211150 - MGP_WSBEiJ_P0044297 Cldn14 protein_coding protein_coding MGP_WSBEiJ_T0044298.1 MGP_WSBEiJ_G0022367.1 mouse_genomes_project 16 94200429 94210900 - MGP_WSBEiJ_P0044298 Cldn14 protein_coding protein_coding MGP_WSBEiJ_T0044299.1 MGP_WSBEiJ_G0022367.1 mouse_genomes_project 16 94200430 94291948 - MGP_WSBEiJ_P0044299 Cldn14 protein_coding protein_coding MGP_WSBEiJ_T0044300.1 MGP_WSBEiJ_G0022367.1 mouse_genomes_project 16 94201147 94210900 - Cldn14 protein_coding processed_transcript MGP_WSBEiJ_T0044301.1 MGP_WSBEiJ_G0022367.1 mouse_genomes_project 16 94201205 94211150 - Cldn14 protein_coding processed_transcript MGP_WSBEiJ_T0099223.1 MGP_WSBEiJ_G0037886.1 mouse_genomes_project 16 84552920 84553047 + Gm26153 snoRNA snoRNA MGP_WSBEiJ_T0043341.1 MGP_WSBEiJ_G0022081.1 mouse_genomes_project 16 33871911 33898895 - MGP_WSBEiJ_P0043341 Fam162a protein_coding protein_coding MGP_WSBEiJ_T0043976.1 MGP_WSBEiJ_G0022268.1 mouse_genomes_project 16 80806377 81246009 + MGP_WSBEiJ_P0043976 Ncam2 protein_coding protein_coding MGP_WSBEiJ_T0043977.1 MGP_WSBEiJ_G0022268.1 mouse_genomes_project 16 80806377 81273686 + MGP_WSBEiJ_P0043977 Ncam2 protein_coding protein_coding MGP_WSBEiJ_T0099225.1 MGP_WSBEiJ_G0037888.1 mouse_genomes_project 16 86759934 86760059 + Gm25715 snoRNA snoRNA MGP_WSBEiJ_T0009952.1 MGP_WSBEiJ_G0008109.1 mouse_genomes_project 16 10288376 10288477 - Mir6365 miRNA miRNA MGP_WSBEiJ_T0042985.1 MGP_WSBEiJ_G0021992.1 mouse_genomes_project 16 21330259 21356097 - MGP_WSBEiJ_P0042985 Bcl6 protein_coding protein_coding MGP_WSBEiJ_T0042986.1 MGP_WSBEiJ_G0021992.1 mouse_genomes_project 16 21334309 21338996 - Bcl6 protein_coding retained_intron MGP_WSBEiJ_T0044424.1 MGP_WSBEiJ_G0022385.1 mouse_genomes_project 16 96643126 96730090 + MGP_WSBEiJ_P0044424 B3galt5 protein_coding protein_coding MGP_WSBEiJ_T0044425.1 MGP_WSBEiJ_G0022385.1 mouse_genomes_project 16 96680744 96723999 + B3galt5 protein_coding processed_transcript MGP_WSBEiJ_T0044426.1 MGP_WSBEiJ_G0022385.1 mouse_genomes_project 16 96680881 96724000 + B3galt5 protein_coding processed_transcript MGP_WSBEiJ_T0044427.1 MGP_WSBEiJ_G0022385.1 mouse_genomes_project 16 96688022 96730088 + MGP_WSBEiJ_P0044427 B3galt5 protein_coding protein_coding MGP_WSBEiJ_T0043917.1 MGP_WSBEiJ_G0022249.1 mouse_genomes_project 16 65518808 66584840 - MGP_WSBEiJ_P0043917 Cadm2 protein_coding protein_coding MGP_WSBEiJ_T0043918.1 MGP_WSBEiJ_G0022249.1 mouse_genomes_project 16 65525092 66584755 - MGP_WSBEiJ_P0043918 Cadm2 protein_coding protein_coding MGP_WSBEiJ_T0043919.1 MGP_WSBEiJ_G0022249.1 mouse_genomes_project 16 65525537 66584840 - MGP_WSBEiJ_P0043919 Cadm2 protein_coding protein_coding MGP_WSBEiJ_T0043920.1 MGP_WSBEiJ_G0022249.1 mouse_genomes_project 16 65526440 65846595 - MGP_WSBEiJ_P0043920 Cadm2 protein_coding protein_coding MGP_WSBEiJ_T0043921.1 MGP_WSBEiJ_G0022249.1 mouse_genomes_project 16 65656443 66584425 - MGP_WSBEiJ_P0043921 Cadm2 protein_coding protein_coding MGP_WSBEiJ_T0043922.1 MGP_WSBEiJ_G0022249.1 mouse_genomes_project 16 65685299 65815867 - Cadm2 protein_coding processed_transcript MGP_WSBEiJ_T0042206.1 MGP_WSBEiJ_G0021817.1 mouse_genomes_project 16 7250332 7292607 - MGP_WSBEiJ_P0042206 Dexi protein_coding protein_coding MGP_WSBEiJ_T0042207.1 MGP_WSBEiJ_G0021817.1 mouse_genomes_project 16 7279775 7281378 - Dexi protein_coding processed_transcript MGP_WSBEiJ_T0042208.1 MGP_WSBEiJ_G0021817.1 mouse_genomes_project 16 7279775 7292607 - MGP_WSBEiJ_P0042208 Dexi protein_coding protein_coding MGP_WSBEiJ_T0043349.1 MGP_WSBEiJ_G0022086.1 mouse_genomes_project 16 34066799 34070236 + protein_coding retained_intron MGP_WSBEiJ_T0043533.1 MGP_WSBEiJ_G0022129.1 mouse_genomes_project 16 41983107 42054809 + MGP_WSBEiJ_P0043533 Drd3 protein_coding protein_coding MGP_WSBEiJ_T0043860.1 MGP_WSBEiJ_G0022221.1 mouse_genomes_project 16 57745559 57746566 - MGP_WSBEiJ_P0043860 protein_coding protein_coding MGP_WSBEiJ_T0043950.1 MGP_WSBEiJ_G0022257.1 mouse_genomes_project 16 75270560 75322273 - MGP_WSBEiJ_P0043950 Samsn1 protein_coding protein_coding MGP_WSBEiJ_T0043951.1 MGP_WSBEiJ_G0022257.1 mouse_genomes_project 16 75270561 75443433 - MGP_WSBEiJ_P0043951 Samsn1 protein_coding protein_coding MGP_WSBEiJ_T0043952.1 MGP_WSBEiJ_G0022257.1 mouse_genomes_project 16 75294510 75322203 - Samsn1 protein_coding retained_intron MGP_WSBEiJ_T0043953.1 MGP_WSBEiJ_G0022257.1 mouse_genomes_project 16 75295602 75322273 - Samsn1 protein_coding retained_intron MGP_WSBEiJ_T0043954.1 MGP_WSBEiJ_G0022257.1 mouse_genomes_project 16 75299897 75322242 - Samsn1 protein_coding retained_intron MGP_WSBEiJ_T0043995.1 MGP_WSBEiJ_G0022272.1 mouse_genomes_project 16 84652362 84679439 + MGP_WSBEiJ_P0043995 Gabpa protein_coding protein_coding MGP_WSBEiJ_T0043996.1 MGP_WSBEiJ_G0022272.1 mouse_genomes_project 16 84652561 84681893 + MGP_WSBEiJ_P0043996 Gabpa protein_coding protein_coding MGP_WSBEiJ_T0043997.1 MGP_WSBEiJ_G0022272.1 mouse_genomes_project 16 84670675 84678553 + Gabpa protein_coding processed_transcript MGP_WSBEiJ_T0043998.1 MGP_WSBEiJ_G0022272.1 mouse_genomes_project 16 84674169 84675708 + Gabpa protein_coding retained_intron MGP_WSBEiJ_T0043999.1 MGP_WSBEiJ_G0022272.1 mouse_genomes_project 16 84678168 84680589 + Gabpa protein_coding processed_transcript MGP_WSBEiJ_T0012820.1 MGP_WSBEiJ_G0010950.1 mouse_genomes_project 16 388503 389069 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043272.1 MGP_WSBEiJ_G0022064.1 mouse_genomes_project 16 31698951 31711204 - MGP_WSBEiJ_P0043272 Umps protein_coding protein_coding MGP_WSBEiJ_T0043273.1 MGP_WSBEiJ_G0022064.1 mouse_genomes_project 16 31698963 31711169 - MGP_WSBEiJ_P0043273 Umps protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012894.1 MGP_WSBEiJ_G0011024.1 mouse_genomes_project 16 90990703 90991255 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006728.1 MGP_WSBEiJ_G0005550.1 mouse_genomes_project 16 10330197 10336500 - 2310015D24Rik lincRNA lincRNA MGP_WSBEiJ_T0006729.1 MGP_WSBEiJ_G0005550.1 mouse_genomes_project 16 10335264 10337188 - 2310015D24Rik lincRNA lincRNA MGP_WSBEiJ_T0043659.1 MGP_WSBEiJ_G0022158.1 mouse_genomes_project 16 44037396 44050405 - MGP_WSBEiJ_P0043659 Abhd10 protein_coding protein_coding MGP_WSBEiJ_T0043660.1 MGP_WSBEiJ_G0022158.1 mouse_genomes_project 16 44039219 44050352 - MGP_WSBEiJ_P0043660 Abhd10 protein_coding protein_coding MGP_WSBEiJ_T0043661.1 MGP_WSBEiJ_G0022158.1 mouse_genomes_project 16 44044435 44050335 - Abhd10 protein_coding processed_transcript MGP_WSBEiJ_T0043662.1 MGP_WSBEiJ_G0022158.1 mouse_genomes_project 16 44047798 44050357 - Abhd10 protein_coding processed_transcript MGP_WSBEiJ_T0043663.1 MGP_WSBEiJ_G0022158.1 mouse_genomes_project 16 44048305 44050350 - Abhd10 protein_coding processed_transcript MGP_WSBEiJ_T0043491.1 MGP_WSBEiJ_G0022120.1 mouse_genomes_project 16 36666123 36788190 - MGP_WSBEiJ_P0043491 Arhgap31 protein_coding protein_coding MGP_WSBEiJ_T0043492.1 MGP_WSBEiJ_G0022120.1 mouse_genomes_project 16 36691923 36787815 - Arhgap31 protein_coding processed_transcript MGP_WSBEiJ_T0043493.1 MGP_WSBEiJ_G0022120.1 mouse_genomes_project 16 36708208 36787814 - Arhgap31 protein_coding retained_intron MGP_WSBEiJ_T0044170.1 MGP_WSBEiJ_G0022344.1 mouse_genomes_project 16 91666719 91686167 + MGP_WSBEiJ_P0044170 Ifngr2 protein_coding protein_coding MGP_WSBEiJ_T0044171.1 MGP_WSBEiJ_G0022344.1 mouse_genomes_project 16 91666966 91681651 + MGP_WSBEiJ_P0044171 Ifngr2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044172.1 MGP_WSBEiJ_G0022344.1 mouse_genomes_project 16 91682324 91686167 + Ifngr2 protein_coding processed_transcript MGP_WSBEiJ_T0099229.1 MGP_WSBEiJ_G0037892.1 mouse_genomes_project 16 90662484 90662606 + Gm23406 snoRNA snoRNA MGP_WSBEiJ_T0012851.1 MGP_WSBEiJ_G0010981.1 mouse_genomes_project 16 19264239 19264663 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006772.1 MGP_WSBEiJ_G0005584.1 mouse_genomes_project 16 84512231 84524357 + Mir155hg lincRNA lincRNA MGP_WSBEiJ_T0006773.1 MGP_WSBEiJ_G0005584.1 mouse_genomes_project 16 84522134 84524357 + Mir155hg lincRNA lincRNA MGP_WSBEiJ_T0009965.1 MGP_WSBEiJ_G0008122.1 mouse_genomes_project 16 17681585 17681670 + Mir1224 miRNA miRNA MGP_WSBEiJ_T0043398.1 MGP_WSBEiJ_G0022096.1 mouse_genomes_project 16 34904783 34935566 + MGP_WSBEiJ_P0043398 Hcls1 protein_coding protein_coding MGP_WSBEiJ_T0043399.1 MGP_WSBEiJ_G0022096.1 mouse_genomes_project 16 34907087 34933883 + MGP_WSBEiJ_P0043399 Hcls1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043400.1 MGP_WSBEiJ_G0022096.1 mouse_genomes_project 16 34925594 34927487 + Hcls1 protein_coding retained_intron MGP_WSBEiJ_T0003603.1 MGP_WSBEiJ_G0003262.1 mouse_genomes_project 16 36360868 36363200 + Maats1os antisense antisense MGP_WSBEiJ_T0043498.1 MGP_WSBEiJ_G0022122.1 mouse_genomes_project 16 36846054 36873708 - MGP_WSBEiJ_P0043498 Upk1b protein_coding protein_coding MGP_WSBEiJ_T0043931.1 MGP_WSBEiJ_G0022252.1 mouse_genomes_project 16 71926707 72327549 + MGP_WSBEiJ_P0043931 Robo1 protein_coding protein_coding MGP_WSBEiJ_T0009998.1 MGP_WSBEiJ_G0008155.1 mouse_genomes_project 16 77554181 77554290 + Gm25025 miRNA miRNA MGP_WSBEiJ_T0043566.1 MGP_WSBEiJ_G0022136.1 mouse_genomes_project 16 42406936 42461447 + MGP_WSBEiJ_P0043566 Usf3 protein_coding protein_coding MGP_WSBEiJ_T0043567.1 MGP_WSBEiJ_G0022136.1 mouse_genomes_project 16 42407087 42449450 + Usf3 protein_coding retained_intron MGP_WSBEiJ_T0043568.1 MGP_WSBEiJ_G0022136.1 mouse_genomes_project 16 42407087 42446916 + MGP_WSBEiJ_P0043568 Usf3 protein_coding protein_coding MGP_WSBEiJ_T0043569.1 MGP_WSBEiJ_G0022136.1 mouse_genomes_project 16 42407087 42461445 + MGP_WSBEiJ_P0043569 Usf3 protein_coding protein_coding MGP_WSBEiJ_T0043696.1 MGP_WSBEiJ_G0022170.1 mouse_genomes_project 16 47221620 47223512 + MGP_WSBEiJ_P0043696 Retnlg protein_coding protein_coding MGP_WSBEiJ_T0044001.1 MGP_WSBEiJ_G0022274.1 mouse_genomes_project 16 85268737 85411634 - MGP_WSBEiJ_P0044001 Cyyr1 protein_coding protein_coding MGP_WSBEiJ_T0044002.1 MGP_WSBEiJ_G0022274.1 mouse_genomes_project 16 85306059 85411634 - MGP_WSBEiJ_P0044002 Cyyr1 protein_coding protein_coding MGP_WSBEiJ_T0043962.1 MGP_WSBEiJ_G0022260.1 mouse_genomes_project 16 77074832 77088756 - MGP_WSBEiJ_P0043962 Gm11146 protein_coding protein_coding MGP_WSBEiJ_T0043605.1 MGP_WSBEiJ_G0022145.1 mouse_genomes_project 16 43098350 43223262 + MGP_WSBEiJ_P0043605 Cd200r2 protein_coding protein_coding MGP_WSBEiJ_T0044041.1 MGP_WSBEiJ_G0022285.1 mouse_genomes_project 16 88484916 88486088 - MGP_WSBEiJ_P0044041 Cldn17 protein_coding protein_coding MGP_WSBEiJ_T0044065.1 MGP_WSBEiJ_G0022307.1 mouse_genomes_project 16 89008902 89009282 - MGP_WSBEiJ_P0044065 Krtap22-2 protein_coding protein_coding MGP_WSBEiJ_T0012850.1 MGP_WSBEiJ_G0010980.1 mouse_genomes_project 16 17620971 17621254 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097955.1 MGP_WSBEiJ_G0036618.1 mouse_genomes_project 16 33988287 33988394 - Gm22885 snRNA snRNA MGP_WSBEiJ_T0012821.1 MGP_WSBEiJ_G0010951.1 mouse_genomes_project 16 803470 803795 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006774.1 MGP_WSBEiJ_G0005585.1 mouse_genomes_project 16 87720390 87729835 + 2810407A14Rik lincRNA lincRNA MGP_WSBEiJ_T0006775.1 MGP_WSBEiJ_G0005585.1 mouse_genomes_project 16 87723920 87778635 + 2810407A14Rik lincRNA lincRNA MGP_WSBEiJ_T0006751.1 MGP_WSBEiJ_G0005570.1 mouse_genomes_project 16 41631978 41641638 - Gm15713 lincRNA lincRNA MGP_WSBEiJ_T0100595.1 MGP_WSBEiJ_G0039053.1 mouse_genomes_project 16 20277472 20300626 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012888.1 MGP_WSBEiJ_G0011018.1 mouse_genomes_project 16 75181093 75182006 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016932.1 MGP_WSBEiJ_G0014747.1 mouse_genomes_project 16 91132035 91144058 + 4931406G06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0042466.1 MGP_WSBEiJ_G0021877.1 mouse_genomes_project 16 14030006 14037255 - MGP_WSBEiJ_P0042466 Ccdc116 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042467.1 MGP_WSBEiJ_G0021877.1 mouse_genomes_project 16 14030010 14038186 - MGP_WSBEiJ_P0042467 Ccdc116 protein_coding protein_coding MGP_WSBEiJ_T0042468.1 MGP_WSBEiJ_G0021877.1 mouse_genomes_project 16 14031992 14035166 - MGP_WSBEiJ_P0042468 Ccdc116 protein_coding protein_coding MGP_WSBEiJ_T0042469.1 MGP_WSBEiJ_G0021877.1 mouse_genomes_project 16 14031993 14035380 - MGP_WSBEiJ_P0042469 Ccdc116 protein_coding protein_coding MGP_WSBEiJ_T0042470.1 MGP_WSBEiJ_G0021877.1 mouse_genomes_project 16 14033677 14035395 - Ccdc116 protein_coding processed_transcript MGP_WSBEiJ_T0012831.1 MGP_WSBEiJ_G0010961.1 mouse_genomes_project 16 10900866 10901868 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006726.1 MGP_WSBEiJ_G0005548.1 mouse_genomes_project 16 8003208 8026578 + 2610020C07Rik lincRNA lincRNA MGP_WSBEiJ_T0009953.1 MGP_WSBEiJ_G0008110.1 mouse_genomes_project 16 10664639 10664728 + Gm27734 miRNA miRNA MGP_WSBEiJ_T0099218.1 MGP_WSBEiJ_G0037881.1 mouse_genomes_project 16 73966895 73967041 + Gm26307 snoRNA snoRNA MGP_WSBEiJ_T0000019.1 MGP_WSBEiJ_G0000014.1 mouse_genomes_project 16 16237201 16237659 - MGP_WSBEiJ_P0000019 Iglc2 IG_C_gene IG_C_gene MGP_WSBEiJ_T0000020.1 MGP_WSBEiJ_G0000014.1 mouse_genomes_project 16 16237206 16239137 - MGP_WSBEiJ_P0000020 Iglc2 IG_C_gene IG_C_gene MGP_WSBEiJ_T0000944.1 MGP_WSBEiJ_G0000880.1 mouse_genomes_project 16 77142998 77143906 + TEC TEC MGP_WSBEiJ_T0043728.1 MGP_WSBEiJ_G0022177.1 mouse_genomes_project 16 48975233 48976529 - MGP_WSBEiJ_P0043728 Ccdc54 protein_coding protein_coding MGP_WSBEiJ_T0003598.1 MGP_WSBEiJ_G0003259.1 mouse_genomes_project 16 32703517 32706937 - 1700119H24Rik antisense antisense MGP_WSBEiJ_T0042229.1 MGP_WSBEiJ_G0021826.1 mouse_genomes_project 16 7743434 7781471 - MGP_WSBEiJ_P0042229 Litaf protein_coding protein_coding MGP_WSBEiJ_T0042230.1 MGP_WSBEiJ_G0021826.1 mouse_genomes_project 16 7744985 7761481 - MGP_WSBEiJ_P0042230 Litaf protein_coding protein_coding MGP_WSBEiJ_T0042231.1 MGP_WSBEiJ_G0021826.1 mouse_genomes_project 16 7747482 7860766 - MGP_WSBEiJ_P0042231 Litaf protein_coding protein_coding MGP_WSBEiJ_T0042232.1 MGP_WSBEiJ_G0021826.1 mouse_genomes_project 16 7750455 7781421 - Litaf protein_coding retained_intron MGP_WSBEiJ_T0003616.1 MGP_WSBEiJ_G0003272.1 mouse_genomes_project 16 65775753 65786177 + 4933411O13Rik antisense antisense MGP_WSBEiJ_T0003617.1 MGP_WSBEiJ_G0003272.1 mouse_genomes_project 16 65775759 65798687 + 4933411O13Rik antisense antisense MGP_WSBEiJ_T0011214.1 MGP_WSBEiJ_G0009371.1 mouse_genomes_project 16 67961050 67961336 + Gm23591 misc_RNA misc_RNA MGP_WSBEiJ_T0042550.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534884 14560358 + MGP_WSBEiJ_P0042550 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042551.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534887 14554805 + Smpd4 protein_coding processed_transcript MGP_WSBEiJ_T0042552.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534887 14560357 + MGP_WSBEiJ_P0042552 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042553.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534887 14541986 + MGP_WSBEiJ_P0042553 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042554.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534890 14542188 + MGP_WSBEiJ_P0042554 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042555.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534890 14558877 + MGP_WSBEiJ_P0042555 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042556.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534893 14539824 + Smpd4 protein_coding retained_intron MGP_WSBEiJ_T0042557.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534893 14560357 + Smpd4 protein_coding retained_intron MGP_WSBEiJ_T0042558.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534893 14537534 + Smpd4 protein_coding retained_intron MGP_WSBEiJ_T0042559.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534893 14560357 + MGP_WSBEiJ_P0042559 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042560.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534893 14541380 + MGP_WSBEiJ_P0042560 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042561.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534904 14554055 + MGP_WSBEiJ_P0042561 Smpd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042562.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534907 14542225 + MGP_WSBEiJ_P0042562 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042563.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534911 14557678 + Smpd4 protein_coding retained_intron MGP_WSBEiJ_T0042564.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14534919 14541544 + MGP_WSBEiJ_P0042564 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042565.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14535047 14539486 + MGP_WSBEiJ_P0042565 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042566.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14537017 14558333 + MGP_WSBEiJ_P0042566 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042567.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14537017 14558333 + MGP_WSBEiJ_P0042567 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042568.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14537017 14558333 + MGP_WSBEiJ_P0042568 Smpd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042569.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14537017 14558333 + MGP_WSBEiJ_P0042569 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042570.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14537017 14558333 + MGP_WSBEiJ_P0042570 Smpd4 protein_coding protein_coding MGP_WSBEiJ_T0042571.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14553851 14556592 + Smpd4 protein_coding retained_intron MGP_WSBEiJ_T0042572.1 MGP_WSBEiJ_G0021893.1 mouse_genomes_project 16 14554116 14556496 + Smpd4 protein_coding retained_intron MGP_WSBEiJ_T0009978.1 MGP_WSBEiJ_G0008135.1 mouse_genomes_project 16 39365737 39365797 + miRNA miRNA MGP_WSBEiJ_T0044411.1 MGP_WSBEiJ_G0022383.1 mouse_genomes_project 16 96562686 96599153 - MGP_WSBEiJ_P0044411 Lca5l protein_coding protein_coding MGP_WSBEiJ_T0044412.1 MGP_WSBEiJ_G0022383.1 mouse_genomes_project 16 96563351 96584667 - MGP_WSBEiJ_P0044412 Lca5l protein_coding unknown_likely_coding MGP_WSBEiJ_T0044413.1 MGP_WSBEiJ_G0022383.1 mouse_genomes_project 16 96563351 96599160 - MGP_WSBEiJ_P0044413 Lca5l protein_coding protein_coding MGP_WSBEiJ_T0044414.1 MGP_WSBEiJ_G0022383.1 mouse_genomes_project 16 96564791 96599153 - Lca5l protein_coding retained_intron MGP_WSBEiJ_T0044415.1 MGP_WSBEiJ_G0022383.1 mouse_genomes_project 16 96587200 96599160 - Lca5l protein_coding processed_transcript MGP_WSBEiJ_T0044173.1 MGP_WSBEiJ_G0022345.1 mouse_genomes_project 16 91695169 91719996 - MGP_WSBEiJ_P0044173 Tmem50b protein_coding protein_coding MGP_WSBEiJ_T0044174.1 MGP_WSBEiJ_G0022345.1 mouse_genomes_project 16 91696424 91719860 - MGP_WSBEiJ_P0044174 Tmem50b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044175.1 MGP_WSBEiJ_G0022345.1 mouse_genomes_project 16 91700814 91719996 - MGP_WSBEiJ_P0044175 Tmem50b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042309.1 MGP_WSBEiJ_G0021843.1 mouse_genomes_project 16 10622911 10659155 + MGP_WSBEiJ_P0042309 Rrn3 protein_coding protein_coding MGP_WSBEiJ_T0099197.1 MGP_WSBEiJ_G0037860.1 mouse_genomes_project 16 33170577 33170780 + Gm25079 snoRNA snoRNA MGP_WSBEiJ_T0097972.1 MGP_WSBEiJ_G0036635.1 mouse_genomes_project 16 62535973 62536071 - Gm22769 snRNA snRNA MGP_WSBEiJ_T0042341.1 MGP_WSBEiJ_G0021848.1 mouse_genomes_project 16 10849628 10967910 + MGP_WSBEiJ_P0042341 2900011O08Rik protein_coding protein_coding MGP_WSBEiJ_T0042100.1 MGP_WSBEiJ_G0021788.1 mouse_genomes_project 16 1504022 1514932 - MGP_WSBEiJ_P0042100 Sept12 protein_coding protein_coding MGP_WSBEiJ_T0000040.1 MGP_WSBEiJ_G0000033.1 mouse_genomes_project 16 16099263 16099301 - MGP_WSBEiJ_P0000040 Iglj3 IG_J_gene IG_J_gene MGP_WSBEiJ_T0044075.1 MGP_WSBEiJ_G0022315.1 mouse_genomes_project 16 89159284 89159743 + MGP_WSBEiJ_P0044075 Gm10061 protein_coding protein_coding MGP_WSBEiJ_T0042542.1 MGP_WSBEiJ_G0021891.1 mouse_genomes_project 16 14476482 14486648 + MGP_WSBEiJ_P0042542 P2rx6 protein_coding protein_coding MGP_WSBEiJ_T0042543.1 MGP_WSBEiJ_G0021891.1 mouse_genomes_project 16 14476482 14485733 + MGP_WSBEiJ_P0042543 P2rx6 protein_coding protein_coding MGP_WSBEiJ_T0042544.1 MGP_WSBEiJ_G0021891.1 mouse_genomes_project 16 14476530 14492437 + MGP_WSBEiJ_P0042544 P2rx6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044050.1 MGP_WSBEiJ_G0022294.1 mouse_genomes_project 16 88752471 88753416 + MGP_WSBEiJ_P0044050 2310034C09Rik protein_coding protein_coding MGP_WSBEiJ_T0043731.1 MGP_WSBEiJ_G0022179.1 mouse_genomes_project 16 50656246 50865331 - MGP_WSBEiJ_P0043731 Alcam protein_coding protein_coding MGP_WSBEiJ_T0043732.1 MGP_WSBEiJ_G0022179.1 mouse_genomes_project 16 50658353 50701297 - MGP_WSBEiJ_P0043732 Alcam protein_coding protein_coding MGP_WSBEiJ_T0043733.1 MGP_WSBEiJ_G0022179.1 mouse_genomes_project 16 50658733 50863720 - MGP_WSBEiJ_P0043733 Alcam protein_coding protein_coding MGP_WSBEiJ_T0043734.1 MGP_WSBEiJ_G0022179.1 mouse_genomes_project 16 50660454 50676321 - Alcam protein_coding retained_intron MGP_WSBEiJ_T0043735.1 MGP_WSBEiJ_G0022179.1 mouse_genomes_project 16 50660487 50678375 - Alcam protein_coding retained_intron MGP_WSBEiJ_T0043736.1 MGP_WSBEiJ_G0022179.1 mouse_genomes_project 16 50675420 50863720 - MGP_WSBEiJ_P0043736 Alcam protein_coding protein_coding MGP_WSBEiJ_T0043737.1 MGP_WSBEiJ_G0022179.1 mouse_genomes_project 16 50709625 50863909 - MGP_WSBEiJ_P0043737 Alcam protein_coding protein_coding MGP_WSBEiJ_T0000930.1 MGP_WSBEiJ_G0000867.1 mouse_genomes_project 16 56944524 56946814 - TEC TEC MGP_WSBEiJ_T0043695.1 MGP_WSBEiJ_G0022169.1 mouse_genomes_project 16 47195487 47197397 + MGP_WSBEiJ_P0043695 Retnla protein_coding protein_coding MGP_WSBEiJ_T0099193.1 MGP_WSBEiJ_G0037856.1 mouse_genomes_project 16 28440821 28440956 + Gm25375 snoRNA snoRNA MGP_WSBEiJ_T0043808.1 MGP_WSBEiJ_G0022201.1 mouse_genomes_project 16 56256422 56396149 - MGP_WSBEiJ_P0043808 Col8a1 protein_coding protein_coding MGP_WSBEiJ_T0009981.1 MGP_WSBEiJ_G0008138.1 mouse_genomes_project 16 42024489 42024600 + Gm25996 miRNA miRNA MGP_WSBEiJ_T0006732.1 MGP_WSBEiJ_G0005553.1 mouse_genomes_project 16 16258765 16292091 - lincRNA lincRNA MGP_WSBEiJ_T0097935.1 MGP_WSBEiJ_G0036598.1 mouse_genomes_project 16 5391874 5391982 - Gm25805 snRNA snRNA MGP_WSBEiJ_T0042292.1 MGP_WSBEiJ_G0021838.1 mouse_genomes_project 16 10067323 10230288 + MGP_WSBEiJ_P0042292 Mkl2 protein_coding protein_coding MGP_WSBEiJ_T0042293.1 MGP_WSBEiJ_G0021838.1 mouse_genomes_project 16 10067348 10147269 + MGP_WSBEiJ_P0042293 Mkl2 protein_coding protein_coding MGP_WSBEiJ_T0042294.1 MGP_WSBEiJ_G0021838.1 mouse_genomes_project 16 10075877 10147266 + MGP_WSBEiJ_P0042294 Mkl2 protein_coding protein_coding MGP_WSBEiJ_T0042295.1 MGP_WSBEiJ_G0021838.1 mouse_genomes_project 16 10172753 10232567 + MGP_WSBEiJ_P0042295 Mkl2 protein_coding protein_coding MGP_WSBEiJ_T0010001.1 MGP_WSBEiJ_G0008158.1 mouse_genomes_project 16 91643107 91643209 - Mir6367 miRNA miRNA MGP_WSBEiJ_T0044150.1 MGP_WSBEiJ_G0022337.1 mouse_genomes_project 16 91266515 91269723 - MGP_WSBEiJ_P0044150 Gm9881 protein_coding protein_coding MGP_WSBEiJ_T0042793.1 MGP_WSBEiJ_G0021949.1 mouse_genomes_project 16 17609679 17619961 + MGP_WSBEiJ_P0042793 protein_coding protein_coding MGP_WSBEiJ_T0042794.1 MGP_WSBEiJ_G0021949.1 mouse_genomes_project 16 17609748 17612010 + protein_coding retained_intron MGP_WSBEiJ_T0042795.1 MGP_WSBEiJ_G0021949.1 mouse_genomes_project 16 17614147 17617626 + protein_coding processed_transcript MGP_WSBEiJ_T0042796.1 MGP_WSBEiJ_G0021949.1 mouse_genomes_project 16 17614793 17617329 + protein_coding retained_intron MGP_WSBEiJ_T0042797.1 MGP_WSBEiJ_G0021949.1 mouse_genomes_project 16 17614923 17617204 + protein_coding retained_intron MGP_WSBEiJ_T0042798.1 MGP_WSBEiJ_G0021949.1 mouse_genomes_project 16 17615143 17616899 + protein_coding retained_intron MGP_WSBEiJ_T0042799.1 MGP_WSBEiJ_G0021949.1 mouse_genomes_project 16 17616421 17622980 + MGP_WSBEiJ_P0042799 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042800.1 MGP_WSBEiJ_G0021949.1 mouse_genomes_project 16 17617428 17618080 + protein_coding retained_intron MGP_WSBEiJ_T0009982.1 MGP_WSBEiJ_G0008139.1 mouse_genomes_project 16 42246831 42246957 + Mir3470b miRNA miRNA MGP_WSBEiJ_T0044034.1 MGP_WSBEiJ_G0022283.1 mouse_genomes_project 16 87626553 87667317 + MGP_WSBEiJ_P0044034 Bach1 protein_coding protein_coding MGP_WSBEiJ_T0044035.1 MGP_WSBEiJ_G0022283.1 mouse_genomes_project 16 87626612 87656938 + Bach1 protein_coding retained_intron MGP_WSBEiJ_T0012826.1 MGP_WSBEiJ_G0010956.1 mouse_genomes_project 16 7984037 7985004 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011606.1 MGP_WSBEiJ_G0009758.1 mouse_genomes_project 16 98025522 98053764 + MGP_WSBEiJ_P0011606 Mx2 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011607.1 MGP_WSBEiJ_G0009758.1 mouse_genomes_project 16 98026292 98054325 + MGP_WSBEiJ_P0011607 Mx2 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011608.1 MGP_WSBEiJ_G0009758.1 mouse_genomes_project 16 98026294 98054324 + MGP_WSBEiJ_P0011608 Mx2 polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0011609.1 MGP_WSBEiJ_G0009758.1 mouse_genomes_project 16 98042927 98044511 + Mx2 polymorphic_pseudogene processed_transcript MGP_WSBEiJ_T0011610.1 MGP_WSBEiJ_G0009758.1 mouse_genomes_project 16 98051836 98053943 + Mx2 polymorphic_pseudogene retained_intron MGP_WSBEiJ_T0044448.1 MGP_WSBEiJ_G0009758.1 mouse_genomes_project 16 98026318 98054289 + MGP_WSBEiJ_P0044448 Mx2 polymorphic_pseudogene unknown_likely_coding MGP_WSBEiJ_T0042970.1 MGP_WSBEiJ_G0021984.1 mouse_genomes_project 16 20462090 20474934 + MGP_WSBEiJ_P0042970 Adipoq protein_coding protein_coding MGP_WSBEiJ_T0042971.1 MGP_WSBEiJ_G0021984.1 mouse_genomes_project 16 20462200 20474198 + MGP_WSBEiJ_P0042971 Adipoq protein_coding protein_coding MGP_WSBEiJ_T0043634.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43688548 43716320 - MGP_WSBEiJ_P0043634 Cd200 protein_coding protein_coding MGP_WSBEiJ_T0043635.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43688596 43716142 - MGP_WSBEiJ_P0043635 Cd200 protein_coding protein_coding MGP_WSBEiJ_T0043636.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43689818 43716239 - Cd200 protein_coding processed_transcript MGP_WSBEiJ_T0043637.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43698858 43706797 - MGP_WSBEiJ_P0043637 Cd200 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043638.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43698858 43716180 - MGP_WSBEiJ_P0043638 Cd200 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043639.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43701223 43716290 - Cd200 protein_coding processed_transcript MGP_WSBEiJ_T0043640.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43701451 43716308 - Cd200 protein_coding processed_transcript MGP_WSBEiJ_T0043641.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43703549 43716284 - Cd200 protein_coding processed_transcript MGP_WSBEiJ_T0043642.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43706056 43716131 - Cd200 protein_coding retained_intron MGP_WSBEiJ_T0043643.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43706777 43716274 - Cd200 protein_coding processed_transcript MGP_WSBEiJ_T0043644.1 MGP_WSBEiJ_G0022151.1 mouse_genomes_project 16 43714499 43716285 - Cd200 protein_coding processed_transcript MGP_WSBEiJ_T0042833.1 MGP_WSBEiJ_G0021955.1 mouse_genomes_project 16 17737572 17753378 + MGP_WSBEiJ_P0042833 protein_coding protein_coding MGP_WSBEiJ_T0042834.1 MGP_WSBEiJ_G0021955.1 mouse_genomes_project 16 17737624 17753378 + MGP_WSBEiJ_P0042834 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042835.1 MGP_WSBEiJ_G0021955.1 mouse_genomes_project 16 17737636 17738675 + protein_coding processed_transcript MGP_WSBEiJ_T0042836.1 MGP_WSBEiJ_G0021955.1 mouse_genomes_project 16 17737637 17741379 + MGP_WSBEiJ_P0042836 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042837.1 MGP_WSBEiJ_G0021955.1 mouse_genomes_project 16 17748303 17749013 + protein_coding processed_transcript MGP_WSBEiJ_T0042838.1 MGP_WSBEiJ_G0021955.1 mouse_genomes_project 16 17748648 17749665 + protein_coding processed_transcript MGP_WSBEiJ_T0042839.1 MGP_WSBEiJ_G0021955.1 mouse_genomes_project 16 17748715 17751406 + protein_coding processed_transcript MGP_WSBEiJ_T0000936.1 MGP_WSBEiJ_G0000872.1 mouse_genomes_project 16 76887892 76891271 + TEC TEC MGP_WSBEiJ_T0042903.1 MGP_WSBEiJ_G0021968.1 mouse_genomes_project 16 19157387 19200280 - MGP_WSBEiJ_P0042903 Liph protein_coding protein_coding MGP_WSBEiJ_T0042904.1 MGP_WSBEiJ_G0021968.1 mouse_genomes_project 16 19157387 19200280 - MGP_WSBEiJ_P0042904 Liph protein_coding protein_coding MGP_WSBEiJ_T0043468.1 MGP_WSBEiJ_G0022117.1 mouse_genomes_project 16 36558145 36587755 - MGP_WSBEiJ_P0043468 Timmdc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043469.1 MGP_WSBEiJ_G0022117.1 mouse_genomes_project 16 36562170 36587884 - MGP_WSBEiJ_P0043469 Timmdc1 protein_coding protein_coding MGP_WSBEiJ_T0043470.1 MGP_WSBEiJ_G0022117.1 mouse_genomes_project 16 36581878 36587862 - Timmdc1 protein_coding processed_transcript MGP_WSBEiJ_T0042980.1 MGP_WSBEiJ_G0021988.1 mouse_genomes_project 16 20790280 20861200 - MGP_WSBEiJ_P0042980 Masp1 protein_coding protein_coding MGP_WSBEiJ_T0042981.1 MGP_WSBEiJ_G0021988.1 mouse_genomes_project 16 20819421 20861160 - MGP_WSBEiJ_P0042981 Masp1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044441.1 MGP_WSBEiJ_G0022391.1 mouse_genomes_project 16 97930414 97951771 - MGP_WSBEiJ_P0044441 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044442.1 MGP_WSBEiJ_G0022391.1 mouse_genomes_project 16 97930416 97951769 - MGP_WSBEiJ_P0044442 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044443.1 MGP_WSBEiJ_G0022391.1 mouse_genomes_project 16 97930416 97951770 - MGP_WSBEiJ_P0044443 protein_coding protein_coding MGP_WSBEiJ_T0044444.1 MGP_WSBEiJ_G0022391.1 mouse_genomes_project 16 97930416 97951770 - MGP_WSBEiJ_P0044444 protein_coding protein_coding MGP_WSBEiJ_T0044445.1 MGP_WSBEiJ_G0022391.1 mouse_genomes_project 16 97946182 97951769 - MGP_WSBEiJ_P0044445 protein_coding protein_coding MGP_WSBEiJ_T0043622.1 MGP_WSBEiJ_G0022148.1 mouse_genomes_project 16 43430879 43450228 - MGP_WSBEiJ_P0043622 Slc35a5 protein_coding protein_coding MGP_WSBEiJ_T0043623.1 MGP_WSBEiJ_G0022148.1 mouse_genomes_project 16 43433253 43450088 - MGP_WSBEiJ_P0043623 Slc35a5 protein_coding protein_coding MGP_WSBEiJ_T0043624.1 MGP_WSBEiJ_G0022148.1 mouse_genomes_project 16 43435321 43443229 - Slc35a5 protein_coding retained_intron MGP_WSBEiJ_T0043625.1 MGP_WSBEiJ_G0022148.1 mouse_genomes_project 16 43435464 43450166 - MGP_WSBEiJ_P0043625 Slc35a5 protein_coding protein_coding MGP_WSBEiJ_T0043626.1 MGP_WSBEiJ_G0022148.1 mouse_genomes_project 16 43435484 43449705 - MGP_WSBEiJ_P0043626 Slc35a5 protein_coding protein_coding MGP_WSBEiJ_T0043627.1 MGP_WSBEiJ_G0022148.1 mouse_genomes_project 16 43443869 43450177 - Slc35a5 protein_coding retained_intron MGP_WSBEiJ_T0043628.1 MGP_WSBEiJ_G0022148.1 mouse_genomes_project 16 43443912 43449975 - MGP_WSBEiJ_P0043628 Slc35a5 protein_coding protein_coding MGP_WSBEiJ_T0043629.1 MGP_WSBEiJ_G0022148.1 mouse_genomes_project 16 43445997 43450122 - Slc35a5 protein_coding retained_intron MGP_WSBEiJ_T0097973.1 MGP_WSBEiJ_G0036636.1 mouse_genomes_project 16 65108984 65109091 + Gm22448 snRNA snRNA MGP_WSBEiJ_T0011211.1 MGP_WSBEiJ_G0009368.1 mouse_genomes_project 16 45925281 45925595 - Gm25318 misc_RNA misc_RNA MGP_WSBEiJ_T0006737.1 MGP_WSBEiJ_G0005556.1 mouse_genomes_project 16 19045856 19048147 - Gm26744 lincRNA lincRNA MGP_WSBEiJ_T0099183.1 MGP_WSBEiJ_G0037846.1 mouse_genomes_project 16 15182877 15183003 - Gm25777 snoRNA snoRNA MGP_WSBEiJ_T0006739.1 MGP_WSBEiJ_G0005558.1 mouse_genomes_project 16 21775263 21777243 - Lppos lincRNA lincRNA MGP_WSBEiJ_T0009968.1 MGP_WSBEiJ_G0008125.1 mouse_genomes_project 16 19853339 19853446 + Mir6362 miRNA miRNA MGP_WSBEiJ_T0042982.1 MGP_WSBEiJ_G0021989.1 mouse_genomes_project 16 20956263 20960434 + MGP_WSBEiJ_P0042982 Rtp4 protein_coding protein_coding MGP_WSBEiJ_T0012854.1 MGP_WSBEiJ_G0010984.1 mouse_genomes_project 16 20515008 20516035 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097297.1 MGP_WSBEiJ_G0035973.1 mouse_genomes_project 16 23468467 23477096 - AU015336 sense_intronic sense_intronic MGP_WSBEiJ_T0044079.1 MGP_WSBEiJ_G0022319.1 mouse_genomes_project 16 89195853 89196397 + MGP_WSBEiJ_P0044079 Krtap20-2 protein_coding protein_coding MGP_WSBEiJ_T0043839.1 MGP_WSBEiJ_G0022210.1 mouse_genomes_project 16 57419784 57420876 - MGP_WSBEiJ_P0043839 protein_coding protein_coding MGP_WSBEiJ_T0042452.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13977432 14002733 - MGP_WSBEiJ_P0042452 Ppil2 protein_coding protein_coding MGP_WSBEiJ_T0042453.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13977432 14002738 - MGP_WSBEiJ_P0042453 Ppil2 protein_coding protein_coding MGP_WSBEiJ_T0042454.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13978193 14002723 - MGP_WSBEiJ_P0042454 Ppil2 protein_coding protein_coding MGP_WSBEiJ_T0042455.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13979483 13980337 - Ppil2 protein_coding retained_intron MGP_WSBEiJ_T0042456.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13980979 13982395 - Ppil2 protein_coding retained_intron MGP_WSBEiJ_T0042457.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13983724 13994505 - Ppil2 protein_coding retained_intron MGP_WSBEiJ_T0042458.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13985798 13988022 - Ppil2 protein_coding retained_intron MGP_WSBEiJ_T0042459.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13986638 14002696 - MGP_WSBEiJ_P0042459 Ppil2 protein_coding protein_coding MGP_WSBEiJ_T0042460.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13987581 14002717 - Ppil2 protein_coding processed_transcript MGP_WSBEiJ_T0042461.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13987886 14002694 - Ppil2 protein_coding retained_intron MGP_WSBEiJ_T0042462.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 13997878 14002717 - Ppil2 protein_coding processed_transcript MGP_WSBEiJ_T0042463.1 MGP_WSBEiJ_G0021874.1 mouse_genomes_project 16 14000334 14002713 - Ppil2 protein_coding retained_intron MGP_WSBEiJ_T0042061.1 MGP_WSBEiJ_G0021777.1 mouse_genomes_project 16 1132244 1143138 + MGP_WSBEiJ_P0042061 Vasn protein_coding protein_coding MGP_WSBEiJ_T0042062.1 MGP_WSBEiJ_G0021777.1 mouse_genomes_project 16 1132271 1139895 + Vasn protein_coding processed_transcript MGP_WSBEiJ_T0044083.1 MGP_WSBEiJ_G0022323.1 mouse_genomes_project 16 89497989 89498609 - MGP_WSBEiJ_P0044083 Krtap7-1 protein_coding protein_coding MGP_WSBEiJ_T0000937.1 MGP_WSBEiJ_G0000873.1 mouse_genomes_project 16 76890514 76893095 - TEC TEC MGP_WSBEiJ_T0043405.1 MGP_WSBEiJ_G0022098.1 mouse_genomes_project 16 34983384 35070452 + MGP_WSBEiJ_P0043405 Polq protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043406.1 MGP_WSBEiJ_G0022098.1 mouse_genomes_project 16 34983384 35070857 + MGP_WSBEiJ_P0043406 Polq protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043407.1 MGP_WSBEiJ_G0022098.1 mouse_genomes_project 16 34983384 35070452 + MGP_WSBEiJ_P0043407 Polq protein_coding protein_coding MGP_WSBEiJ_T0043408.1 MGP_WSBEiJ_G0022098.1 mouse_genomes_project 16 34983384 35070877 + MGP_WSBEiJ_P0043408 Polq protein_coding protein_coding MGP_WSBEiJ_T0043409.1 MGP_WSBEiJ_G0022098.1 mouse_genomes_project 16 34983413 34989041 + Polq protein_coding retained_intron MGP_WSBEiJ_T0043410.1 MGP_WSBEiJ_G0022098.1 mouse_genomes_project 16 35014663 35036585 + Polq protein_coding retained_intron MGP_WSBEiJ_T0043411.1 MGP_WSBEiJ_G0022098.1 mouse_genomes_project 16 35060581 35070877 + Polq protein_coding retained_intron MGP_WSBEiJ_T0097979.1 MGP_WSBEiJ_G0036642.1 mouse_genomes_project 16 89439664 89439769 - Gm23655 snRNA snRNA MGP_WSBEiJ_T0011205.1 MGP_WSBEiJ_G0009362.1 mouse_genomes_project 16 17513997 17514272 + Gm23332 misc_RNA misc_RNA MGP_WSBEiJ_T0043947.1 MGP_WSBEiJ_G0022256.1 mouse_genomes_project 16 75159488 75171120 - MGP_WSBEiJ_P0043947 Hspa13 protein_coding protein_coding MGP_WSBEiJ_T0043948.1 MGP_WSBEiJ_G0022256.1 mouse_genomes_project 16 75160938 75171090 - MGP_WSBEiJ_P0043948 Hspa13 protein_coding protein_coding MGP_WSBEiJ_T0043949.1 MGP_WSBEiJ_G0022256.1 mouse_genomes_project 16 75163486 75171081 - Hspa13 protein_coding retained_intron MGP_WSBEiJ_T0009949.1 MGP_WSBEiJ_G0008106.1 mouse_genomes_project 16 8056040 8056118 - Mir1945 miRNA miRNA MGP_WSBEiJ_T0096792.1 MGP_WSBEiJ_G0035473.1 mouse_genomes_project 16 88960012 88960248 - pseudogene pseudogene MGP_WSBEiJ_T0009988.1 MGP_WSBEiJ_G0008145.1 mouse_genomes_project 16 57364904 57365000 - Gm27564 miRNA miRNA MGP_WSBEiJ_T0012893.1 MGP_WSBEiJ_G0011023.1 mouse_genomes_project 16 87465389 87465779 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043023.1 MGP_WSBEiJ_G0022005.1 mouse_genomes_project 16 25625020 25896573 - MGP_WSBEiJ_P0043023 Fgf12 protein_coding protein_coding MGP_WSBEiJ_T0044068.1 MGP_WSBEiJ_G0022310.1 mouse_genomes_project 16 89042605 89043150 - MGP_WSBEiJ_P0044068 protein_coding protein_coding MGP_WSBEiJ_T0043804.1 MGP_WSBEiJ_G0022199.1 mouse_genomes_project 16 55931587 56237837 - MGP_WSBEiJ_P0043804 Cmss1 protein_coding protein_coding MGP_WSBEiJ_T0043364.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34714623 34746155 - MGP_WSBEiJ_P0043364 Slc15a2 protein_coding protein_coding MGP_WSBEiJ_T0043365.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34716223 34746013 - MGP_WSBEiJ_P0043365 Slc15a2 protein_coding protein_coding MGP_WSBEiJ_T0043366.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34716223 34745985 - MGP_WSBEiJ_P0043366 Slc15a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043367.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34716761 34719206 - Slc15a2 protein_coding retained_intron MGP_WSBEiJ_T0043368.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34718905 34719855 - Slc15a2 protein_coding processed_transcript MGP_WSBEiJ_T0043369.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34720345 34721152 - Slc15a2 protein_coding retained_intron MGP_WSBEiJ_T0043370.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34721569 34727899 - Slc15a2 protein_coding retained_intron MGP_WSBEiJ_T0043371.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34721616 34727709 - Slc15a2 protein_coding retained_intron MGP_WSBEiJ_T0043372.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34726243 34727625 - Slc15a2 protein_coding retained_intron MGP_WSBEiJ_T0043373.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34731876 34746133 - MGP_WSBEiJ_P0043373 Slc15a2 protein_coding protein_coding MGP_WSBEiJ_T0043374.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34731879 34746117 - MGP_WSBEiJ_P0043374 Slc15a2 protein_coding protein_coding MGP_WSBEiJ_T0043375.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34732073 34733281 - Slc15a2 protein_coding retained_intron MGP_WSBEiJ_T0043376.1 MGP_WSBEiJ_G0022092.1 mouse_genomes_project 16 34742578 34743658 - Slc15a2 protein_coding retained_intron MGP_WSBEiJ_T0043691.1 MGP_WSBEiJ_G0022165.1 mouse_genomes_project 16 46635080 46645309 + MGP_WSBEiJ_P0043691 Dppa2 protein_coding protein_coding MGP_WSBEiJ_T0000039.1 MGP_WSBEiJ_G0000032.1 mouse_genomes_project 16 16098593 16098631 - MGP_WSBEiJ_P0000039 Iglj3p IG_J_gene IG_J_gene MGP_WSBEiJ_T0042606.1 MGP_WSBEiJ_G0021903.1 mouse_genomes_project 16 14825835 14836429 - MGP_WSBEiJ_P0042606 Dgcr14 protein_coding protein_coding MGP_WSBEiJ_T0012858.1 MGP_WSBEiJ_G0010988.1 mouse_genomes_project 16 26744370 26744764 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099192.1 MGP_WSBEiJ_G0037855.1 mouse_genomes_project 16 22280269 22280403 + Gm22672 snoRNA snoRNA MGP_WSBEiJ_T0000947.1 MGP_WSBEiJ_G0000883.1 mouse_genomes_project 16 91357207 91358008 + TEC TEC MGP_WSBEiJ_T0003624.1 MGP_WSBEiJ_G0003279.1 mouse_genomes_project 16 96549786 96551865 - Gm15317 antisense antisense MGP_WSBEiJ_T0042983.1 MGP_WSBEiJ_G0021990.1 mouse_genomes_project 16 21252721 21253984 - MGP_WSBEiJ_P0042983 Sst protein_coding protein_coding MGP_WSBEiJ_T0042735.1 MGP_WSBEiJ_G0021930.1 mouse_genomes_project 16 16346310 16347405 - MGP_WSBEiJ_P0042735 Olfr164 protein_coding protein_coding MGP_WSBEiJ_T0043556.1 MGP_WSBEiJ_G0022134.1 mouse_genomes_project 16 42315294 42372313 - MGP_WSBEiJ_P0043556 Atp6v1a protein_coding protein_coding MGP_WSBEiJ_T0043557.1 MGP_WSBEiJ_G0022134.1 mouse_genomes_project 16 42315537 42372204 - MGP_WSBEiJ_P0043557 Atp6v1a protein_coding protein_coding MGP_WSBEiJ_T0043558.1 MGP_WSBEiJ_G0022134.1 mouse_genomes_project 16 42327070 42371988 - Atp6v1a protein_coding retained_intron MGP_WSBEiJ_T0043559.1 MGP_WSBEiJ_G0022134.1 mouse_genomes_project 16 42338840 42372638 - MGP_WSBEiJ_P0043559 Atp6v1a protein_coding protein_coding MGP_WSBEiJ_T0043560.1 MGP_WSBEiJ_G0022134.1 mouse_genomes_project 16 42338963 42372026 - MGP_WSBEiJ_P0043560 Atp6v1a protein_coding protein_coding MGP_WSBEiJ_T0043561.1 MGP_WSBEiJ_G0022134.1 mouse_genomes_project 16 42341033 42372713 - MGP_WSBEiJ_P0043561 Atp6v1a protein_coding protein_coding MGP_WSBEiJ_T0043844.1 MGP_WSBEiJ_G0022213.1 mouse_genomes_project 16 57513062 57538630 - MGP_WSBEiJ_P0043844 protein_coding protein_coding MGP_WSBEiJ_T0042395.1 MGP_WSBEiJ_G0021866.1 mouse_genomes_project 16 13281423 13368615 - MGP_WSBEiJ_P0042395 Fgd4 protein_coding protein_coding MGP_WSBEiJ_T0042396.1 MGP_WSBEiJ_G0021866.1 mouse_genomes_project 16 13292796 13424639 - Fgd4 protein_coding retained_intron MGP_WSBEiJ_T0042397.1 MGP_WSBEiJ_G0021866.1 mouse_genomes_project 16 13292796 13365827 - MGP_WSBEiJ_P0042397 Fgd4 protein_coding protein_coding MGP_WSBEiJ_T0042398.1 MGP_WSBEiJ_G0021866.1 mouse_genomes_project 16 13311627 13424804 - Fgd4 protein_coding retained_intron MGP_WSBEiJ_T0042399.1 MGP_WSBEiJ_G0021866.1 mouse_genomes_project 16 13320868 13473773 - MGP_WSBEiJ_P0042399 Fgd4 protein_coding protein_coding MGP_WSBEiJ_T0042400.1 MGP_WSBEiJ_G0021866.1 mouse_genomes_project 16 13332133 13424583 - Fgd4 protein_coding retained_intron MGP_WSBEiJ_T0042401.1 MGP_WSBEiJ_G0021866.1 mouse_genomes_project 16 13342847 13473263 - Fgd4 protein_coding retained_intron MGP_WSBEiJ_T0042402.1 MGP_WSBEiJ_G0021866.1 mouse_genomes_project 16 13343826 13388613 - Fgd4 protein_coding retained_intron MGP_WSBEiJ_T0009984.1 MGP_WSBEiJ_G0008141.1 mouse_genomes_project 16 49123544 49123658 + Mir6363 miRNA miRNA MGP_WSBEiJ_T0042752.1 MGP_WSBEiJ_G0021940.1 mouse_genomes_project 16 16985786 17024642 - MGP_WSBEiJ_P0042752 Klhl6 protein_coding protein_coding MGP_WSBEiJ_T0042753.1 MGP_WSBEiJ_G0021940.1 mouse_genomes_project 16 16996950 17007173 - Klhl6 protein_coding retained_intron MGP_WSBEiJ_T0042754.1 MGP_WSBEiJ_G0021940.1 mouse_genomes_project 16 16996970 17024612 - MGP_WSBEiJ_P0042754 Klhl6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042755.1 MGP_WSBEiJ_G0021940.1 mouse_genomes_project 16 17006897 17024535 - MGP_WSBEiJ_P0042755 Klhl6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003608.1 MGP_WSBEiJ_G0003267.1 mouse_genomes_project 16 44253911 44256861 + Gm15640 antisense antisense MGP_WSBEiJ_T0011208.1 MGP_WSBEiJ_G0009365.1 mouse_genomes_project 16 34459283 34459601 - Gm25902 misc_RNA misc_RNA MGP_WSBEiJ_T0042184.1 MGP_WSBEiJ_G0021810.1 mouse_genomes_project 16 6889762 6894160 + MGP_WSBEiJ_P0042184 Rpl39l protein_coding protein_coding MGP_WSBEiJ_T0042185.1 MGP_WSBEiJ_G0021810.1 mouse_genomes_project 16 6889764 6894441 + MGP_WSBEiJ_P0042185 Rpl39l protein_coding protein_coding MGP_WSBEiJ_T0043864.1 MGP_WSBEiJ_G0022225.1 mouse_genomes_project 16 57865149 57866189 - MGP_WSBEiJ_P0043864 protein_coding protein_coding MGP_WSBEiJ_T0042234.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7869540 7931859 - MGP_WSBEiJ_P0042234 Txndc11 protein_coding protein_coding MGP_WSBEiJ_T0042235.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7870050 7879414 - Txndc11 protein_coding retained_intron MGP_WSBEiJ_T0042236.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7879380 7881981 - Txndc11 protein_coding processed_transcript MGP_WSBEiJ_T0042237.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7880147 7931820 - MGP_WSBEiJ_P0042237 Txndc11 protein_coding protein_coding MGP_WSBEiJ_T0042238.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7881863 7931782 - MGP_WSBEiJ_P0042238 Txndc11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042239.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7882900 7920217 - Txndc11 protein_coding processed_transcript MGP_WSBEiJ_T0042240.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7899196 7931762 - MGP_WSBEiJ_P0042240 Txndc11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042241.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7900542 7931859 - MGP_WSBEiJ_P0042241 Txndc11 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042242.1 MGP_WSBEiJ_G0021828.1 mouse_genomes_project 16 7909688 7931822 - MGP_WSBEiJ_P0042242 Txndc11 protein_coding protein_coding MGP_WSBEiJ_T0042875.1 MGP_WSBEiJ_G0021959.1 mouse_genomes_project 16 17810021 17814378 + MGP_WSBEiJ_P0042875 Polr2h protein_coding protein_coding MGP_WSBEiJ_T0042876.1 MGP_WSBEiJ_G0021959.1 mouse_genomes_project 16 17810530 17814118 + Polr2h protein_coding processed_transcript MGP_WSBEiJ_T0009999.1 MGP_WSBEiJ_G0008156.1 mouse_genomes_project 16 84523251 84523316 + Mir155 miRNA miRNA MGP_WSBEiJ_T0043881.1 MGP_WSBEiJ_G0022234.1 mouse_genomes_project 16 58281693 58309250 - MGP_WSBEiJ_P0043881 Arl6 protein_coding protein_coding MGP_WSBEiJ_T0043882.1 MGP_WSBEiJ_G0022234.1 mouse_genomes_project 16 58282072 58309474 - MGP_WSBEiJ_P0043882 Arl6 protein_coding protein_coding MGP_WSBEiJ_T0043883.1 MGP_WSBEiJ_G0022234.1 mouse_genomes_project 16 58282349 58302603 - MGP_WSBEiJ_P0043883 Arl6 protein_coding protein_coding MGP_WSBEiJ_T0043884.1 MGP_WSBEiJ_G0022234.1 mouse_genomes_project 16 58289953 58309212 - MGP_WSBEiJ_P0043884 Arl6 protein_coding protein_coding MGP_WSBEiJ_T0043351.1 MGP_WSBEiJ_G0022088.1 mouse_genomes_project 16 34390446 34395274 - MGP_WSBEiJ_P0043351 Stfa3 protein_coding protein_coding MGP_WSBEiJ_T0042901.1 MGP_WSBEiJ_G0021966.1 mouse_genomes_project 16 19095052 19141108 + MGP_WSBEiJ_P0042901 Map3k13 protein_coding protein_coding MGP_WSBEiJ_T0043854.1 MGP_WSBEiJ_G0022218.1 mouse_genomes_project 16 57661976 57665946 - MGP_WSBEiJ_P0043854 Olfr187 protein_coding protein_coding MGP_WSBEiJ_T0043855.1 MGP_WSBEiJ_G0022218.1 mouse_genomes_project 16 57661976 57662954 - MGP_WSBEiJ_P0043855 Olfr187 protein_coding protein_coding MGP_WSBEiJ_T0043856.1 MGP_WSBEiJ_G0022218.1 mouse_genomes_project 16 57662501 57665964 - MGP_WSBEiJ_P0043856 Olfr187 protein_coding protein_coding MGP_WSBEiJ_T0003618.1 MGP_WSBEiJ_G0003273.1 mouse_genomes_project 16 91066815 91072679 + antisense antisense MGP_WSBEiJ_T0006752.1 MGP_WSBEiJ_G0005571.1 mouse_genomes_project 16 42575307 42578349 + Gm26732 lincRNA lincRNA MGP_WSBEiJ_T0006755.1 MGP_WSBEiJ_G0005573.1 mouse_genomes_project 16 48157708 48162048 + Gm16619 lincRNA lincRNA MGP_WSBEiJ_T0042942.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413604 20420821 + MGP_WSBEiJ_P0042942 Eif4a2 protein_coding protein_coding MGP_WSBEiJ_T0042943.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413639 20420991 + MGP_WSBEiJ_P0042943 Eif4a2 protein_coding protein_coding MGP_WSBEiJ_T0042944.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413914 20421010 + MGP_WSBEiJ_P0042944 Eif4a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042945.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413918 20415461 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042946.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413918 20420057 + MGP_WSBEiJ_P0042946 Eif4a2 protein_coding protein_coding MGP_WSBEiJ_T0042947.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413919 20415254 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042948.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413919 20415365 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042949.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413919 20420820 + MGP_WSBEiJ_P0042949 Eif4a2 protein_coding protein_coding MGP_WSBEiJ_T0042950.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413919 20420800 + MGP_WSBEiJ_P0042950 Eif4a2 protein_coding protein_coding MGP_WSBEiJ_T0042951.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413919 20418143 + MGP_WSBEiJ_P0042951 Eif4a2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0042952.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413927 20418582 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042953.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413931 20416875 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042954.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413933 20416484 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042955.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413937 20415334 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042956.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413937 20420804 + MGP_WSBEiJ_P0042956 Eif4a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042957.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413938 20420821 + MGP_WSBEiJ_P0042957 Eif4a2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042958.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20413939 20416413 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042959.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20414077 20416816 + Eif4a2 protein_coding processed_transcript MGP_WSBEiJ_T0042960.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20414743 20415631 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042961.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20415391 20416732 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042962.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20416208 20418219 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042963.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20416398 20417890 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042964.1 MGP_WSBEiJ_G0021982.1 mouse_genomes_project 16 20416864 20419209 + Eif4a2 protein_coding retained_intron MGP_WSBEiJ_T0042990.1 MGP_WSBEiJ_G0021994.1 mouse_genomes_project 16 22693628 22839380 + MGP_WSBEiJ_P0042990 Tprg protein_coding protein_coding MGP_WSBEiJ_T0042991.1 MGP_WSBEiJ_G0021994.1 mouse_genomes_project 16 22693632 22727500 + Tprg protein_coding retained_intron MGP_WSBEiJ_T0009948.1 MGP_WSBEiJ_G0008105.1 mouse_genomes_project 16 7002978 7003050 + Gm22932 miRNA miRNA MGP_WSBEiJ_T0042264.1 MGP_WSBEiJ_G0021831.1 mouse_genomes_project 16 8020070 8055943 - MGP_WSBEiJ_P0042264 Gspt1 protein_coding protein_coding MGP_WSBEiJ_T0042265.1 MGP_WSBEiJ_G0021831.1 mouse_genomes_project 16 8020830 8055882 - MGP_WSBEiJ_P0042265 Gspt1 protein_coding protein_coding MGP_WSBEiJ_T0042266.1 MGP_WSBEiJ_G0021831.1 mouse_genomes_project 16 8021179 8025280 - MGP_WSBEiJ_P0042266 Gspt1 protein_coding protein_coding MGP_WSBEiJ_T0042267.1 MGP_WSBEiJ_G0021831.1 mouse_genomes_project 16 8023365 8029292 - Gspt1 protein_coding retained_intron MGP_WSBEiJ_T0042268.1 MGP_WSBEiJ_G0021831.1 mouse_genomes_project 16 8031686 8038981 - Gspt1 protein_coding retained_intron MGP_WSBEiJ_T0043845.1 MGP_WSBEiJ_G0022214.1 mouse_genomes_project 16 57530281 57557794 - MGP_WSBEiJ_P0043845 protein_coding protein_coding MGP_WSBEiJ_T0042720.1 MGP_WSBEiJ_G0021926.1 mouse_genomes_project 16 15855738 15859279 + MGP_WSBEiJ_P0042720 2510002D24Rik protein_coding protein_coding MGP_WSBEiJ_T0042721.1 MGP_WSBEiJ_G0021926.1 mouse_genomes_project 16 15855741 15856548 + MGP_WSBEiJ_P0042721 2510002D24Rik protein_coding protein_coding MGP_WSBEiJ_T0042722.1 MGP_WSBEiJ_G0021926.1 mouse_genomes_project 16 15855741 15859164 + MGP_WSBEiJ_P0042722 2510002D24Rik protein_coding protein_coding MGP_WSBEiJ_T0042724.1 MGP_WSBEiJ_G0021926.1 mouse_genomes_project 16 15855815 15858924 + 2510002D24Rik protein_coding retained_intron MGP_WSBEiJ_T0099191.1 MGP_WSBEiJ_G0037854.1 mouse_genomes_project 16 20418178 20418356 + Gm22519 snoRNA snoRNA MGP_WSBEiJ_T0043345.1 MGP_WSBEiJ_G0022083.1 mouse_genomes_project 16 33948488 33959563 - MGP_WSBEiJ_P0043345 Csta1 protein_coding protein_coding MGP_WSBEiJ_T0043346.1 MGP_WSBEiJ_G0022083.1 mouse_genomes_project 16 33950711 33959527 - MGP_WSBEiJ_P0043346 Csta1 protein_coding protein_coding MGP_WSBEiJ_T0044047.1 MGP_WSBEiJ_G0022291.1 mouse_genomes_project 16 88687367 88688161 - MGP_WSBEiJ_P0044047 2310061N02Rik protein_coding protein_coding MGP_WSBEiJ_T0003584.1 MGP_WSBEiJ_G0003248.1 mouse_genomes_project 16 14043594 14044669 + Gm15648 antisense antisense MGP_WSBEiJ_T0011212.1 MGP_WSBEiJ_G0009369.1 mouse_genomes_project 16 46078896 46079128 + Gm25339 misc_RNA misc_RNA MGP_WSBEiJ_T0006721.1 MGP_WSBEiJ_G0005543.1 mouse_genomes_project 16 1446093 1450657 - Gm16861 lincRNA lincRNA MGP_WSBEiJ_T0043532.1 MGP_WSBEiJ_G0022128.1 mouse_genomes_project 16 41871574 41888123 - MGP_WSBEiJ_P0043532 Tigit protein_coding protein_coding MGP_WSBEiJ_T0042628.1 MGP_WSBEiJ_G0021908.1 mouse_genomes_project 16 15065974 15093142 + MGP_WSBEiJ_P0042628 Rtn4r protein_coding protein_coding MGP_WSBEiJ_T0006734.1 MGP_WSBEiJ_G0005555.1 mouse_genomes_project 16 18993841 19006541 + 1300002E11Rik lincRNA lincRNA MGP_WSBEiJ_T0006735.1 MGP_WSBEiJ_G0005555.1 mouse_genomes_project 16 18993856 19009906 + 1300002E11Rik lincRNA lincRNA MGP_WSBEiJ_T0006736.1 MGP_WSBEiJ_G0005555.1 mouse_genomes_project 16 18993886 19006541 + 1300002E11Rik lincRNA lincRNA MGP_WSBEiJ_T0043798.1 MGP_WSBEiJ_G0022196.1 mouse_genomes_project 16 55785297 55796751 - MGP_WSBEiJ_P0043798 Nit2 protein_coding protein_coding MGP_WSBEiJ_T0042630.1 MGP_WSBEiJ_G0021910.1 mouse_genomes_project 16 15162951 15177307 - MGP_WSBEiJ_P0042630 Zdhhc8 protein_coding protein_coding MGP_WSBEiJ_T0042464.1 MGP_WSBEiJ_G0021875.1 mouse_genomes_project 16 14005829 14017487 - MGP_WSBEiJ_P0042464 2610318N02Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0011207.1 MGP_WSBEiJ_G0009364.1 mouse_genomes_project 16 20761263 20761577 - Gm23430 misc_RNA misc_RNA MGP_WSBEiJ_T0042485.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14182967 14184876 + MGP_WSBEiJ_P0042485 Tmem191c protein_coding protein_coding MGP_WSBEiJ_T0042486.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183011 14185361 + MGP_WSBEiJ_P0042486 Tmem191c protein_coding protein_coding MGP_WSBEiJ_T0042487.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183030 14184180 + Tmem191c protein_coding processed_transcript MGP_WSBEiJ_T0042488.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183044 14183799 + Tmem191c protein_coding retained_intron MGP_WSBEiJ_T0042489.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183044 14185357 + MGP_WSBEiJ_P0042489 Tmem191c protein_coding protein_coding MGP_WSBEiJ_T0042490.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183050 14184102 + Tmem191c protein_coding processed_transcript MGP_WSBEiJ_T0042491.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183136 14184437 + MGP_WSBEiJ_P0042491 Tmem191c protein_coding protein_coding MGP_WSBEiJ_T0042492.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183379 14185361 + MGP_WSBEiJ_P0042492 Tmem191c protein_coding protein_coding MGP_WSBEiJ_T0042493.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183562 14184905 + MGP_WSBEiJ_P0042493 Tmem191c protein_coding protein_coding MGP_WSBEiJ_T0042494.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183783 14184753 + Tmem191c protein_coding retained_intron MGP_WSBEiJ_T0042495.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14183797 14184866 + Tmem191c protein_coding retained_intron MGP_WSBEiJ_T0042496.1 MGP_WSBEiJ_G0021882.1 mouse_genomes_project 16 14184300 14189921 + Tmem191c protein_coding retained_intron MGP_WSBEiJ_T0042178.1 MGP_WSBEiJ_G0021809.1 mouse_genomes_project 16 6241950 6695032 - MGP_WSBEiJ_P0042178 Grin2a protein_coding protein_coding MGP_WSBEiJ_T0042179.1 MGP_WSBEiJ_G0021809.1 mouse_genomes_project 16 6253809 6694691 - MGP_WSBEiJ_P0042179 Grin2a protein_coding protein_coding MGP_WSBEiJ_T0042180.1 MGP_WSBEiJ_G0021809.1 mouse_genomes_project 16 6253895 6692642 - MGP_WSBEiJ_P0042180 Grin2a protein_coding protein_coding MGP_WSBEiJ_T0042181.1 MGP_WSBEiJ_G0021809.1 mouse_genomes_project 16 6453920 6489020 - Grin2a protein_coding processed_transcript MGP_WSBEiJ_T0042182.1 MGP_WSBEiJ_G0021809.1 mouse_genomes_project 16 6691763 6695669 - Grin2a protein_coding retained_intron MGP_WSBEiJ_T0042183.1 MGP_WSBEiJ_G0021809.1 mouse_genomes_project 16 6691763 6694379 - Grin2a protein_coding retained_intron MGP_WSBEiJ_T0012834.1 MGP_WSBEiJ_G0010964.1 mouse_genomes_project 16 12073716 12074186 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0042342.1 MGP_WSBEiJ_G0021849.1 mouse_genomes_project 16 10972020 11026314 - MGP_WSBEiJ_P0042342 Marf1 protein_coding protein_coding MGP_WSBEiJ_T0043096.1 MGP_WSBEiJ_G0022024.1 mouse_genomes_project 16 28976963 29017444 + MGP_WSBEiJ_P0043096 Bdh1 protein_coding protein_coding MGP_WSBEiJ_T0043097.1 MGP_WSBEiJ_G0022024.1 mouse_genomes_project 16 28986110 29018848 + MGP_WSBEiJ_P0043097 Bdh1 protein_coding protein_coding MGP_WSBEiJ_T0043098.1 MGP_WSBEiJ_G0022024.1 mouse_genomes_project 16 28986114 28998770 + Bdh1 protein_coding retained_intron MGP_WSBEiJ_T0043099.1 MGP_WSBEiJ_G0022024.1 mouse_genomes_project 16 28986661 29017169 + MGP_WSBEiJ_P0043099 Bdh1 protein_coding protein_coding MGP_WSBEiJ_T0043100.1 MGP_WSBEiJ_G0022024.1 mouse_genomes_project 16 28996749 29016697 + MGP_WSBEiJ_P0043100 Bdh1 protein_coding protein_coding MGP_WSBEiJ_T0043101.1 MGP_WSBEiJ_G0022024.1 mouse_genomes_project 16 29018062 29018848 + Bdh1 protein_coding processed_transcript MGP_WSBEiJ_T0100031.1 MGP_WSBEiJ_G0038662.1 mouse_genomes_project 16 47792740 47793115 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100032.1 MGP_WSBEiJ_G0038662.1 mouse_genomes_project 16 47792869 47793878 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0042154.1 MGP_WSBEiJ_G0021803.1 mouse_genomes_project 16 5249797 5253620 - MGP_WSBEiJ_P0042154 Tmem186 protein_coding protein_coding MGP_WSBEiJ_T0042042.1 MGP_WSBEiJ_G0021773.1 mouse_genomes_project 16 1033531 1049497 - MGP_WSBEiJ_P0042042 Tfap4 protein_coding protein_coding MGP_WSBEiJ_T0006787.1 MGP_WSBEiJ_G0005593.1 mouse_genomes_project 16 96285400 96286729 + Gm15340 lincRNA lincRNA MGP_WSBEiJ_T0043793.1 MGP_WSBEiJ_G0022193.1 mouse_genomes_project 16 55429239 55517275 - MGP_WSBEiJ_P0043793 Tmem45a protein_coding protein_coding MGP_WSBEiJ_T0043794.1 MGP_WSBEiJ_G0022193.1 mouse_genomes_project 16 55430567 55433909 - Tmem45a protein_coding processed_transcript MGP_WSBEiJ_T0043795.1 MGP_WSBEiJ_G0022193.1 mouse_genomes_project 16 55453355 55460508 - MGP_WSBEiJ_P0043795 Tmem45a protein_coding protein_coding MGP_WSBEiJ_T0044076.1 MGP_WSBEiJ_G0022316.1 mouse_genomes_project 16 89167800 89168197 + MGP_WSBEiJ_P0044076 Gm9789 protein_coding protein_coding MGP_WSBEiJ_T0003575.1 MGP_WSBEiJ_G0003240.1 mouse_genomes_project 16 1527939 1533354 + Gm42477 antisense antisense MGP_WSBEiJ_T0043499.1 MGP_WSBEiJ_G0022123.1 mouse_genomes_project 16 36886115 36906244 - MGP_WSBEiJ_P0043499 4930435E12Rik protein_coding protein_coding MGP_WSBEiJ_T0043500.1 MGP_WSBEiJ_G0022123.1 mouse_genomes_project 16 36900977 36906226 - 4930435E12Rik protein_coding retained_intron MGP_WSBEiJ_T0009977.1 MGP_WSBEiJ_G0008134.1 mouse_genomes_project 16 38500195 38500297 - Gm27887 miRNA miRNA MGP_WSBEiJ_T0043594.1 MGP_WSBEiJ_G0022141.1 mouse_genomes_project 16 42994997 43007979 + MGP_WSBEiJ_P0043594 Nepro protein_coding protein_coding MGP_WSBEiJ_T0043595.1 MGP_WSBEiJ_G0022141.1 mouse_genomes_project 16 42995053 43002059 + MGP_WSBEiJ_P0043595 Nepro protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043596.1 MGP_WSBEiJ_G0022141.1 mouse_genomes_project 16 42995053 43007268 + MGP_WSBEiJ_P0043596 Nepro protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043597.1 MGP_WSBEiJ_G0022141.1 mouse_genomes_project 16 42996863 43004824 + Nepro protein_coding retained_intron MGP_WSBEiJ_T0043598.1 MGP_WSBEiJ_G0022141.1 mouse_genomes_project 16 42997815 43005421 + MGP_WSBEiJ_P0043598 Nepro protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000038.1 MGP_WSBEiJ_G0000031.1 mouse_genomes_project 16 16095420 16095458 - MGP_WSBEiJ_P0000038 Iglj1 IG_J_gene IG_J_gene MGP_WSBEiJ_T0043831.1 MGP_WSBEiJ_G0022207.1 mouse_genomes_project 16 57332200 57333490 - MGP_WSBEiJ_P0043831 Gpr15 protein_coding protein_coding MGP_WSBEiJ_T0042269.1 MGP_WSBEiJ_G0021832.1 mouse_genomes_project 16 8119067 8125373 + MGP_WSBEiJ_P0042269 Tnfrsf17 protein_coding protein_coding MGP_WSBEiJ_T0099201.1 MGP_WSBEiJ_G0037864.1 mouse_genomes_project 16 36259763 36259892 - Gm27931 snoRNA snoRNA MGP_WSBEiJ_T0044129.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91015665 91097716 - MGP_WSBEiJ_P0044129 Synj1 protein_coding protein_coding MGP_WSBEiJ_T0044130.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91015674 91097503 - MGP_WSBEiJ_P0044130 Synj1 protein_coding protein_coding MGP_WSBEiJ_T0044131.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91015679 91029904 - MGP_WSBEiJ_P0044131 Synj1 protein_coding protein_coding MGP_WSBEiJ_T0044132.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91017811 91097521 - MGP_WSBEiJ_P0044132 Synj1 protein_coding protein_coding MGP_WSBEiJ_T0044133.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91018228 91026132 - Synj1 protein_coding processed_transcript MGP_WSBEiJ_T0044134.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91018374 91024348 - MGP_WSBEiJ_P0044134 Synj1 protein_coding protein_coding MGP_WSBEiJ_T0044135.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91023952 91029909 - MGP_WSBEiJ_P0044135 Synj1 protein_coding protein_coding MGP_WSBEiJ_T0044136.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91041897 91097469 - Synj1 protein_coding retained_intron MGP_WSBEiJ_T0044137.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91047113 91097468 - MGP_WSBEiJ_P0044137 Synj1 protein_coding protein_coding MGP_WSBEiJ_T0044138.1 MGP_WSBEiJ_G0022334.1 mouse_genomes_project 16 91095725 91097471 - Synj1 protein_coding retained_intron MGP_WSBEiJ_T0043616.1 MGP_WSBEiJ_G0022147.1 mouse_genomes_project 16 43385349 43386122 + Ccdc80 protein_coding processed_transcript MGP_WSBEiJ_T0043617.1 MGP_WSBEiJ_G0022147.1 mouse_genomes_project 16 43385401 43386831 + Ccdc80 protein_coding processed_transcript MGP_WSBEiJ_T0043618.1 MGP_WSBEiJ_G0022147.1 mouse_genomes_project 16 43385537 43386287 + Ccdc80 protein_coding processed_transcript MGP_WSBEiJ_T0043619.1 MGP_WSBEiJ_G0022147.1 mouse_genomes_project 16 43385559 43421311 + MGP_WSBEiJ_P0043619 Ccdc80 protein_coding protein_coding MGP_WSBEiJ_T0043620.1 MGP_WSBEiJ_G0022147.1 mouse_genomes_project 16 43385622 43387097 + Ccdc80 protein_coding processed_transcript MGP_WSBEiJ_T0043621.1 MGP_WSBEiJ_G0022147.1 mouse_genomes_project 16 43385979 43421570 + MGP_WSBEiJ_P0043621 Ccdc80 protein_coding protein_coding MGP_WSBEiJ_T0012892.1 MGP_WSBEiJ_G0011022.1 mouse_genomes_project 16 83113312 83113795 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009954.1 MGP_WSBEiJ_G0008111.1 mouse_genomes_project 16 10993675 10993741 - Gm27671 miRNA miRNA MGP_WSBEiJ_T0016936.1 MGP_WSBEiJ_G0014751.1 mouse_genomes_project 16 92073418 92107237 + D430001F17Rik processed_transcript processed_transcript MGP_WSBEiJ_T0009962.1 MGP_WSBEiJ_G0008119.1 mouse_genomes_project 16 15325949 15326020 - Gm26219 miRNA miRNA MGP_WSBEiJ_T0012844.1 MGP_WSBEiJ_G0010974.1 mouse_genomes_project 16 15964855 15965263 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097950.1 MGP_WSBEiJ_G0036613.1 mouse_genomes_project 16 23124608 23124715 - Gm24928 snRNA snRNA MGP_WSBEiJ_T0043352.1 MGP_WSBEiJ_G0022089.1 mouse_genomes_project 16 34439651 34512812 - MGP_WSBEiJ_P0043352 Casr protein_coding protein_coding MGP_WSBEiJ_T0043353.1 MGP_WSBEiJ_G0022089.1 mouse_genomes_project 16 34439651 34512812 - MGP_WSBEiJ_P0043353 Casr protein_coding protein_coding MGP_WSBEiJ_T0043354.1 MGP_WSBEiJ_G0022089.1 mouse_genomes_project 16 34440422 34512284 - MGP_WSBEiJ_P0043354 Casr protein_coding protein_coding MGP_WSBEiJ_T0043355.1 MGP_WSBEiJ_G0022089.1 mouse_genomes_project 16 34464796 34512819 - Casr protein_coding processed_transcript MGP_WSBEiJ_T0097977.1 MGP_WSBEiJ_G0036640.1 mouse_genomes_project 16 84085066 84085173 + Gm24508 snRNA snRNA MGP_WSBEiJ_T0043664.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44053647 44156784 - MGP_WSBEiJ_P0043664 Phldb2 protein_coding protein_coding MGP_WSBEiJ_T0043665.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44053798 44156639 - MGP_WSBEiJ_P0043665 Phldb2 protein_coding protein_coding MGP_WSBEiJ_T0043666.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44054562 44112016 - MGP_WSBEiJ_P0043666 Phldb2 protein_coding protein_coding MGP_WSBEiJ_T0043667.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44055193 44156715 - MGP_WSBEiJ_P0043667 Phldb2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043668.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44061729 44271014 - MGP_WSBEiJ_P0043668 Phldb2 protein_coding protein_coding MGP_WSBEiJ_T0043669.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44072448 44082018 - Phldb2 protein_coding processed_transcript MGP_WSBEiJ_T0043670.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44087449 44099812 - Phldb2 protein_coding processed_transcript MGP_WSBEiJ_T0043671.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44090074 44101930 - MGP_WSBEiJ_P0043671 Phldb2 protein_coding protein_coding MGP_WSBEiJ_T0043672.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44138126 44270909 - MGP_WSBEiJ_P0043672 Phldb2 protein_coding protein_coding MGP_WSBEiJ_T0043673.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44138295 44156749 - Phldb2 protein_coding processed_transcript MGP_WSBEiJ_T0043674.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44214744 44215672 - Phldb2 protein_coding processed_transcript MGP_WSBEiJ_T0043675.1 MGP_WSBEiJ_G0022159.1 mouse_genomes_project 16 44214936 44270949 - Phldb2 protein_coding processed_transcript MGP_WSBEiJ_T0042511.1 MGP_WSBEiJ_G0021885.1 mouse_genomes_project 16 14315242 14342854 + MGP_WSBEiJ_P0042511 Snap29 protein_coding protein_coding MGP_WSBEiJ_T0043846.1 MGP_WSBEiJ_G0022215.1 mouse_genomes_project 16 57552769 57553873 - MGP_WSBEiJ_P0043846 Olfr181 protein_coding protein_coding MGP_WSBEiJ_T0043847.1 MGP_WSBEiJ_G0022215.1 mouse_genomes_project 16 57552769 57557042 - MGP_WSBEiJ_P0043847 Olfr181 protein_coding protein_coding MGP_WSBEiJ_T0043848.1 MGP_WSBEiJ_G0022215.1 mouse_genomes_project 16 57553397 57557042 - MGP_WSBEiJ_P0043848 Olfr181 protein_coding protein_coding MGP_WSBEiJ_T0043849.1 MGP_WSBEiJ_G0022215.1 mouse_genomes_project 16 57553545 57557006 - MGP_WSBEiJ_P0043849 Olfr181 protein_coding protein_coding MGP_WSBEiJ_T0012841.1 MGP_WSBEiJ_G0010971.1 mouse_genomes_project 16 13972876 13973569 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012891.1 MGP_WSBEiJ_G0011021.1 mouse_genomes_project 16 79487557 79487987 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000940.1 MGP_WSBEiJ_G0000876.1 mouse_genomes_project 16 77019698 77022048 + TEC TEC MGP_WSBEiJ_T0042022.1 MGP_WSBEiJ_G0021769.1 mouse_genomes_project 16 508807 548546 - MGP_WSBEiJ_P0042022 Trap1 protein_coding protein_coding MGP_WSBEiJ_T0042023.1 MGP_WSBEiJ_G0021769.1 mouse_genomes_project 16 508976 513535 - Trap1 protein_coding processed_transcript MGP_WSBEiJ_T0042024.1 MGP_WSBEiJ_G0021769.1 mouse_genomes_project 16 527286 548494 - MGP_WSBEiJ_P0042024 Trap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042025.1 MGP_WSBEiJ_G0021769.1 mouse_genomes_project 16 535924 548546 - Trap1 protein_coding retained_intron MGP_WSBEiJ_T0041976.1 MGP_WSBEiJ_G0021762.1 mouse_genomes_project 16 329403 359970 + MGP_WSBEiJ_P0041976 Naa60 protein_coding protein_coding MGP_WSBEiJ_T0041978.1 MGP_WSBEiJ_G0021762.1 mouse_genomes_project 16 343911 363932 + MGP_WSBEiJ_P0041978 Naa60 protein_coding protein_coding MGP_WSBEiJ_T0041979.1 MGP_WSBEiJ_G0021762.1 mouse_genomes_project 16 343919 356492 + MGP_WSBEiJ_P0041979 Naa60 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041980.1 MGP_WSBEiJ_G0021762.1 mouse_genomes_project 16 343934 362908 + MGP_WSBEiJ_P0041980 Naa60 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041981.1 MGP_WSBEiJ_G0021762.1 mouse_genomes_project 16 343937 356523 + MGP_WSBEiJ_P0041981 Naa60 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041982.1 MGP_WSBEiJ_G0021762.1 mouse_genomes_project 16 343964 359559 + Naa60 protein_coding retained_intron MGP_WSBEiJ_T0041983.1 MGP_WSBEiJ_G0021762.1 mouse_genomes_project 16 353518 361098 + MGP_WSBEiJ_P0041983 Naa60 protein_coding protein_coding MGP_WSBEiJ_T0041984.1 MGP_WSBEiJ_G0021762.1 mouse_genomes_project 16 353518 360973 + MGP_WSBEiJ_P0041984 Naa60 protein_coding protein_coding MGP_WSBEiJ_T0044196.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91804388 91811578 - MGP_WSBEiJ_P0044196 Donson protein_coding protein_coding MGP_WSBEiJ_T0044197.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91806385 91815912 - Donson protein_coding retained_intron MGP_WSBEiJ_T0044198.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91806385 91815912 - MGP_WSBEiJ_P0044198 Donson protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044199.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91806385 91815912 - MGP_WSBEiJ_P0044199 Donson protein_coding protein_coding MGP_WSBEiJ_T0044200.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91806642 91815022 - MGP_WSBEiJ_P0044200 Donson protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044201.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91806642 91815864 - MGP_WSBEiJ_P0044201 Donson protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044202.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91806642 91815022 - MGP_WSBEiJ_P0044202 Donson protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044203.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91806848 91818085 - MGP_WSBEiJ_P0044203 Donson protein_coding protein_coding MGP_WSBEiJ_T0044204.1 MGP_WSBEiJ_G0022349.1 mouse_genomes_project 16 91806948 91815850 - MGP_WSBEiJ_P0044204 Donson protein_coding protein_coding MGP_WSBEiJ_T0012870.1 MGP_WSBEiJ_G0011000.1 mouse_genomes_project 16 36887910 36888304 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0009980.1 MGP_WSBEiJ_G0008137.1 mouse_genomes_project 16 41862262 41862345 + Mir568 miRNA miRNA MGP_WSBEiJ_T0044386.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96376927 96483814 - MGP_WSBEiJ_P0044386 Brwd1 protein_coding protein_coding MGP_WSBEiJ_T0044387.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96377284 96483833 - MGP_WSBEiJ_P0044387 Brwd1 protein_coding protein_coding MGP_WSBEiJ_T0044388.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96384104 96483833 - MGP_WSBEiJ_P0044388 Brwd1 protein_coding protein_coding MGP_WSBEiJ_T0044389.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96387281 96483833 - MGP_WSBEiJ_P0044389 Brwd1 protein_coding protein_coding MGP_WSBEiJ_T0044390.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96398444 96464012 - MGP_WSBEiJ_P0044390 Brwd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044391.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96399131 96444527 - MGP_WSBEiJ_P0044391 Brwd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044392.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96400293 96404642 - Brwd1 protein_coding processed_transcript MGP_WSBEiJ_T0044393.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96400686 96404549 - Brwd1 protein_coding retained_intron MGP_WSBEiJ_T0044394.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96404913 96407478 - Brwd1 protein_coding retained_intron MGP_WSBEiJ_T0044395.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96407310 96424086 - MGP_WSBEiJ_P0044395 Brwd1 protein_coding protein_coding MGP_WSBEiJ_T0044396.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96411723 96413421 - Brwd1 protein_coding retained_intron MGP_WSBEiJ_T0044397.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96415027 96415480 - Brwd1 protein_coding retained_intron MGP_WSBEiJ_T0044398.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96429719 96432305 - Brwd1 protein_coding retained_intron MGP_WSBEiJ_T0044399.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96432542 96458498 - MGP_WSBEiJ_P0044399 Brwd1 protein_coding protein_coding MGP_WSBEiJ_T0044400.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96432666 96458463 - MGP_WSBEiJ_P0044400 Brwd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044401.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96443588 96444810 - Brwd1 protein_coding retained_intron MGP_WSBEiJ_T0044402.1 MGP_WSBEiJ_G0022380.1 mouse_genomes_project 16 96464058 96483912 - MGP_WSBEiJ_P0044402 Brwd1 protein_coding protein_coding MGP_WSBEiJ_T0009983.1 MGP_WSBEiJ_G0008140.1 mouse_genomes_project 16 42814072 42814156 - Mir3081 miRNA miRNA MGP_WSBEiJ_T0097940.1 MGP_WSBEiJ_G0036603.1 mouse_genomes_project 16 14106956 14107063 - Gm22129 snRNA snRNA MGP_WSBEiJ_T0043924.1 MGP_WSBEiJ_G0022251.1 mouse_genomes_project 16 69463489 69730922 + MGP_WSBEiJ_P0043924 Gbe1 protein_coding protein_coding MGP_WSBEiJ_T0043925.1 MGP_WSBEiJ_G0022251.1 mouse_genomes_project 16 69463603 69518802 + Gbe1 protein_coding retained_intron MGP_WSBEiJ_T0043926.1 MGP_WSBEiJ_G0022251.1 mouse_genomes_project 16 69463604 69698220 + Gbe1 protein_coding retained_intron MGP_WSBEiJ_T0043927.1 MGP_WSBEiJ_G0022251.1 mouse_genomes_project 16 69463604 69697789 + MGP_WSBEiJ_P0043927 Gbe1 protein_coding protein_coding MGP_WSBEiJ_T0043928.1 MGP_WSBEiJ_G0022251.1 mouse_genomes_project 16 69463627 69730922 + MGP_WSBEiJ_P0043928 Gbe1 protein_coding protein_coding MGP_WSBEiJ_T0043929.1 MGP_WSBEiJ_G0022251.1 mouse_genomes_project 16 69463674 69730920 + MGP_WSBEiJ_P0043929 Gbe1 protein_coding protein_coding MGP_WSBEiJ_T0043930.1 MGP_WSBEiJ_G0022251.1 mouse_genomes_project 16 69720696 69730704 + Gbe1 protein_coding retained_intron MGP_WSBEiJ_T0099214.1 MGP_WSBEiJ_G0037877.1 mouse_genomes_project 16 64016642 64016772 - Gm22429 snoRNA snoRNA MGP_WSBEiJ_T0042353.1 MGP_WSBEiJ_G0021852.1 mouse_genomes_project 16 11170069 11187698 - Fopnl protein_coding processed_transcript MGP_WSBEiJ_T0042354.1 MGP_WSBEiJ_G0021852.1 mouse_genomes_project 16 11170754 11187687 - MGP_WSBEiJ_P0042354 Fopnl protein_coding protein_coding MGP_WSBEiJ_T0009967.1 MGP_WSBEiJ_G0008124.1 mouse_genomes_project 16 19777059 19777188 - Mir8095 miRNA miRNA MGP_WSBEiJ_T0044449.1 MGP_WSBEiJ_G0022393.1 mouse_genomes_project 16 98058104 98106129 - MGP_WSBEiJ_P0044449 Tmprss2 protein_coding protein_coding MGP_WSBEiJ_T0012862.1 MGP_WSBEiJ_G0010992.1 mouse_genomes_project 16 30214981 30215590 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000922.1 MGP_WSBEiJ_G0000859.1 mouse_genomes_project 16 14847127 14848293 + TEC TEC MGP_WSBEiJ_T0009975.1 MGP_WSBEiJ_G0008132.1 mouse_genomes_project 16 30797116 30797201 + Mir1947 miRNA miRNA MGP_WSBEiJ_T0042938.1 MGP_WSBEiJ_G0021979.1 mouse_genomes_project 16 20217339 20227943 + MGP_WSBEiJ_P0042938 Hrg protein_coding protein_coding MGP_WSBEiJ_T0006783.1 MGP_WSBEiJ_G0005590.1 mouse_genomes_project 16 94059232 94061971 - 2310043M15Rik lincRNA lincRNA MGP_WSBEiJ_T0096791.1 MGP_WSBEiJ_G0035472.1 mouse_genomes_project 16 88752523 88753153 + pseudogene pseudogene MGP_WSBEiJ_T0042906.1 MGP_WSBEiJ_G0021970.1 mouse_genomes_project 16 19271405 19382649 - Igf2bp2 protein_coding retained_intron MGP_WSBEiJ_T0042907.1 MGP_WSBEiJ_G0021970.1 mouse_genomes_project 16 19271424 19301509 - Igf2bp2 protein_coding retained_intron MGP_WSBEiJ_T0042908.1 MGP_WSBEiJ_G0021970.1 mouse_genomes_project 16 19273143 19382593 - MGP_WSBEiJ_P0042908 Igf2bp2 protein_coding protein_coding MGP_WSBEiJ_T0042909.1 MGP_WSBEiJ_G0021970.1 mouse_genomes_project 16 19273716 19276049 - Igf2bp2 protein_coding retained_intron MGP_WSBEiJ_T0042910.1 MGP_WSBEiJ_G0021970.1 mouse_genomes_project 16 19288392 19291492 - Igf2bp2 protein_coding retained_intron MGP_WSBEiJ_T0042911.1 MGP_WSBEiJ_G0021970.1 mouse_genomes_project 16 19296361 19355833 - Igf2bp2 protein_coding processed_transcript MGP_WSBEiJ_T0042912.1 MGP_WSBEiJ_G0021970.1 mouse_genomes_project 16 19370081 19382622 - Igf2bp2 protein_coding processed_transcript MGP_WSBEiJ_T0042913.1 MGP_WSBEiJ_G0021970.1 mouse_genomes_project 16 19380509 19382605 - Igf2bp2 protein_coding retained_intron MGP_WSBEiJ_T0043208.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30470132 30525465 - MGP_WSBEiJ_P0043208 Rubcn protein_coding protein_coding MGP_WSBEiJ_T0043209.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30470136 30473350 - Rubcn protein_coding retained_intron MGP_WSBEiJ_T0043210.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30470136 30525438 - MGP_WSBEiJ_P0043210 Rubcn protein_coding protein_coding MGP_WSBEiJ_T0043211.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30470149 30525238 - MGP_WSBEiJ_P0043211 Rubcn protein_coding protein_coding MGP_WSBEiJ_T0043212.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30470157 30525450 - MGP_WSBEiJ_P0043212 Rubcn protein_coding protein_coding MGP_WSBEiJ_T0043213.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30471896 30487570 - Rubcn protein_coding retained_intron MGP_WSBEiJ_T0043214.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30476903 30478694 - Rubcn protein_coding retained_intron MGP_WSBEiJ_T0043215.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30484500 30485547 - Rubcn protein_coding retained_intron MGP_WSBEiJ_T0043216.1 MGP_WSBEiJ_G0022051.1 mouse_genomes_project 16 30516463 30525437 - Rubcn protein_coding processed_transcript MGP_WSBEiJ_T0000926.1 MGP_WSBEiJ_G0000863.1 mouse_genomes_project 16 38240602 38240645 + TEC TEC MGP_WSBEiJ_T0044341.1 MGP_WSBEiJ_G0022373.1 mouse_genomes_project 16 94811969 94840644 - MGP_WSBEiJ_P0044341 Dscr3 protein_coding protein_coding MGP_WSBEiJ_T0044342.1 MGP_WSBEiJ_G0022373.1 mouse_genomes_project 16 94816245 94824904 - Dscr3 protein_coding processed_transcript MGP_WSBEiJ_T0044343.1 MGP_WSBEiJ_G0022373.1 mouse_genomes_project 16 94818325 94840251 - Dscr3 protein_coding retained_intron MGP_WSBEiJ_T0044344.1 MGP_WSBEiJ_G0022373.1 mouse_genomes_project 16 94824176 94840260 - Dscr3 protein_coding retained_intron MGP_WSBEiJ_T0044345.1 MGP_WSBEiJ_G0022373.1 mouse_genomes_project 16 94825870 94840236 - Dscr3 protein_coding retained_intron MGP_WSBEiJ_T0099210.1 MGP_WSBEiJ_G0037873.1 mouse_genomes_project 16 54619252 54619387 - Gm22422 snoRNA snoRNA MGP_WSBEiJ_T0006779.1 MGP_WSBEiJ_G0005588.1 mouse_genomes_project 16 91418202 91427174 - Gm15966 lincRNA lincRNA MGP_WSBEiJ_T0006780.1 MGP_WSBEiJ_G0005588.1 mouse_genomes_project 16 91418427 91423776 - Gm15966 lincRNA lincRNA MGP_WSBEiJ_T0043650.1 MGP_WSBEiJ_G0022154.1 mouse_genomes_project 16 43911044 43921799 + MGP_WSBEiJ_P0043650 Gcsam protein_coding protein_coding MGP_WSBEiJ_T0043651.1 MGP_WSBEiJ_G0022154.1 mouse_genomes_project 16 43911087 43923423 + MGP_WSBEiJ_P0043651 Gcsam protein_coding protein_coding MGP_WSBEiJ_T0042744.1 MGP_WSBEiJ_G0021938.1 mouse_genomes_project 16 16814620 16827899 + MGP_WSBEiJ_P0042744 B3gnt5 protein_coding protein_coding MGP_WSBEiJ_T0042745.1 MGP_WSBEiJ_G0021938.1 mouse_genomes_project 16 16814646 16828416 + MGP_WSBEiJ_P0042745 B3gnt5 protein_coding protein_coding MGP_WSBEiJ_T0042746.1 MGP_WSBEiJ_G0021938.1 mouse_genomes_project 16 16814646 16828126 + MGP_WSBEiJ_P0042746 B3gnt5 protein_coding protein_coding MGP_WSBEiJ_T0042747.1 MGP_WSBEiJ_G0021938.1 mouse_genomes_project 16 16814811 16821298 + B3gnt5 protein_coding processed_transcript MGP_WSBEiJ_T0042748.1 MGP_WSBEiJ_G0021938.1 mouse_genomes_project 16 16814998 16824513 + B3gnt5 protein_coding retained_intron MGP_WSBEiJ_T0042749.1 MGP_WSBEiJ_G0021938.1 mouse_genomes_project 16 16814999 16820041 + B3gnt5 protein_coding retained_intron MGP_WSBEiJ_T0042750.1 MGP_WSBEiJ_G0021938.1 mouse_genomes_project 16 16815466 16826302 + MGP_WSBEiJ_P0042750 B3gnt5 protein_coding protein_coding MGP_WSBEiJ_T0097956.1 MGP_WSBEiJ_G0036619.1 mouse_genomes_project 16 34074344 34074449 - Gm24801 snRNA snRNA MGP_WSBEiJ_T0006764.1 MGP_WSBEiJ_G0005578.1 mouse_genomes_project 16 55912766 55913407 + Gm26800 lincRNA lincRNA MGP_WSBEiJ_T0000928.1 MGP_WSBEiJ_G0000865.1 mouse_genomes_project 16 41526505 41526852 - TEC TEC MGP_WSBEiJ_T0000942.1 MGP_WSBEiJ_G0000878.1 mouse_genomes_project 16 77102896 77105659 + TEC TEC MGP_WSBEiJ_T0042333.1 MGP_WSBEiJ_G0021846.1 mouse_genomes_project 16 10759188 10807704 + MGP_WSBEiJ_P0042333 Mpv17l protein_coding protein_coding MGP_WSBEiJ_T0042334.1 MGP_WSBEiJ_G0021846.1 mouse_genomes_project 16 10799007 10807069 + MGP_WSBEiJ_P0042334 Mpv17l protein_coding protein_coding MGP_WSBEiJ_T0042335.1 MGP_WSBEiJ_G0021846.1 mouse_genomes_project 16 10799072 10806928 + MGP_WSBEiJ_P0042335 Mpv17l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042336.1 MGP_WSBEiJ_G0021846.1 mouse_genomes_project 16 10799079 10805225 + MGP_WSBEiJ_P0042336 Mpv17l protein_coding protein_coding MGP_WSBEiJ_T0042337.1 MGP_WSBEiJ_G0021846.1 mouse_genomes_project 16 10799091 10807647 + MGP_WSBEiJ_P0042337 Mpv17l protein_coding protein_coding MGP_WSBEiJ_T0042338.1 MGP_WSBEiJ_G0021846.1 mouse_genomes_project 16 10799471 10805191 + MGP_WSBEiJ_P0042338 Mpv17l protein_coding protein_coding MGP_WSBEiJ_T0003594.1 MGP_WSBEiJ_G0003257.1 mouse_genomes_project 16 31523572 31533230 - Gm15657 antisense antisense MGP_WSBEiJ_T0003595.1 MGP_WSBEiJ_G0003257.1 mouse_genomes_project 16 31531523 31533228 - Gm15657 antisense antisense MGP_WSBEiJ_T0003596.1 MGP_WSBEiJ_G0003257.1 mouse_genomes_project 16 31531854 31534006 - Gm15657 antisense antisense MGP_WSBEiJ_T0043441.1 MGP_WSBEiJ_G0022105.1 mouse_genomes_project 16 35881780 35887289 - Gm36028 protein_coding retained_intron MGP_WSBEiJ_T0043442.1 MGP_WSBEiJ_G0022105.1 mouse_genomes_project 16 35881780 35891963 - MGP_WSBEiJ_P0043442 Gm36028 protein_coding protein_coding MGP_WSBEiJ_T0043904.1 MGP_WSBEiJ_G0022242.1 mouse_genomes_project 16 63596894 63611151 - MGP_WSBEiJ_P0043904 4930453N24Rik protein_coding protein_coding MGP_WSBEiJ_T0043165.1 MGP_WSBEiJ_G0022040.1 mouse_genomes_project 16 29937062 30012776 + MGP_WSBEiJ_P0043165 Ubxn7 protein_coding protein_coding MGP_WSBEiJ_T0044282.1 MGP_WSBEiJ_G0022365.1 mouse_genomes_project 16 94105481 94153235 + MGP_WSBEiJ_P0044282 Morc3 protein_coding protein_coding MGP_WSBEiJ_T0044283.1 MGP_WSBEiJ_G0022365.1 mouse_genomes_project 16 94105481 94153232 + MGP_WSBEiJ_P0044283 Morc3 protein_coding protein_coding MGP_WSBEiJ_T0044284.1 MGP_WSBEiJ_G0022365.1 mouse_genomes_project 16 94105595 94117995 + Morc3 protein_coding retained_intron MGP_WSBEiJ_T0044285.1 MGP_WSBEiJ_G0022365.1 mouse_genomes_project 16 94105617 94152190 + MGP_WSBEiJ_P0044285 Morc3 protein_coding protein_coding MGP_WSBEiJ_T0044286.1 MGP_WSBEiJ_G0022365.1 mouse_genomes_project 16 94105623 94137726 + MGP_WSBEiJ_P0044286 Morc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044287.1 MGP_WSBEiJ_G0022365.1 mouse_genomes_project 16 94117877 94122477 + Morc3 protein_coding processed_transcript MGP_WSBEiJ_T0044288.1 MGP_WSBEiJ_G0022365.1 mouse_genomes_project 16 94127033 94129184 + Morc3 protein_coding retained_intron MGP_WSBEiJ_T0042707.1 MGP_WSBEiJ_G0021924.1 mouse_genomes_project 16 15797834 15830451 - MGP_WSBEiJ_P0042707 Cdc45 protein_coding protein_coding MGP_WSBEiJ_T0042708.1 MGP_WSBEiJ_G0021924.1 mouse_genomes_project 16 15797840 15830105 - MGP_WSBEiJ_P0042708 Cdc45 protein_coding protein_coding MGP_WSBEiJ_T0042709.1 MGP_WSBEiJ_G0021924.1 mouse_genomes_project 16 15825833 15830466 - MGP_WSBEiJ_P0042709 Cdc45 protein_coding protein_coding MGP_WSBEiJ_T0043871.1 MGP_WSBEiJ_G0022232.1 mouse_genomes_project 16 58133962 58154607 + MGP_WSBEiJ_P0043871 Mina protein_coding protein_coding MGP_WSBEiJ_T0043872.1 MGP_WSBEiJ_G0022232.1 mouse_genomes_project 16 58133991 58139753 + MGP_WSBEiJ_P0043872 Mina protein_coding protein_coding MGP_WSBEiJ_T0043873.1 MGP_WSBEiJ_G0022232.1 mouse_genomes_project 16 58134009 58153814 + MGP_WSBEiJ_P0043873 Mina protein_coding protein_coding MGP_WSBEiJ_T0043874.1 MGP_WSBEiJ_G0022232.1 mouse_genomes_project 16 58134255 58154437 + MGP_WSBEiJ_P0043874 Mina protein_coding protein_coding MGP_WSBEiJ_T0043875.1 MGP_WSBEiJ_G0022232.1 mouse_genomes_project 16 58134530 58137944 + MGP_WSBEiJ_P0043875 Mina protein_coding protein_coding MGP_WSBEiJ_T0043876.1 MGP_WSBEiJ_G0022232.1 mouse_genomes_project 16 58149679 58151961 + Mina protein_coding retained_intron MGP_WSBEiJ_T0003578.1 MGP_WSBEiJ_G0003243.1 mouse_genomes_project 16 10199551 10219959 - antisense antisense MGP_WSBEiJ_T0003579.1 MGP_WSBEiJ_G0003243.1 mouse_genomes_project 16 10212184 10219955 - antisense antisense MGP_WSBEiJ_T0099207.1 MGP_WSBEiJ_G0037870.1 mouse_genomes_project 16 51895412 51895520 - Gm22459 snoRNA snoRNA MGP_WSBEiJ_T0097967.1 MGP_WSBEiJ_G0036630.1 mouse_genomes_project 16 49316658 49316765 - Gm24925 snRNA snRNA MGP_WSBEiJ_T0009990.1 MGP_WSBEiJ_G0008147.1 mouse_genomes_project 16 61582218 61582286 + Gm25986 miRNA miRNA MGP_WSBEiJ_T0043747.1 MGP_WSBEiJ_G0022184.1 mouse_genomes_project 16 54545180 54551123 + MGP_WSBEiJ_P0043747 Rpl24 protein_coding protein_coding MGP_WSBEiJ_T0043748.1 MGP_WSBEiJ_G0022184.1 mouse_genomes_project 16 54545326 54551123 + Rpl24 protein_coding processed_transcript MGP_WSBEiJ_T0043749.1 MGP_WSBEiJ_G0022184.1 mouse_genomes_project 16 54545452 54549462 + Rpl24 protein_coding retained_intron MGP_WSBEiJ_T0043750.1 MGP_WSBEiJ_G0022184.1 mouse_genomes_project 16 54549682 54551123 + Rpl24 protein_coding retained_intron MGP_WSBEiJ_T0006768.1 MGP_WSBEiJ_G0005581.1 mouse_genomes_project 16 68999772 69001115 - lincRNA lincRNA MGP_WSBEiJ_T0044059.1 MGP_WSBEiJ_G0022301.1 mouse_genomes_project 16 88869446 88869972 - MGP_WSBEiJ_P0044059 Krtap19-3 protein_coding protein_coding MGP_WSBEiJ_T0042412.1 MGP_WSBEiJ_G0021869.1 mouse_genomes_project 16 13729752 13733066 - MGP_WSBEiJ_P0042412 Igll1 protein_coding protein_coding MGP_WSBEiJ_T0042413.1 MGP_WSBEiJ_G0021869.1 mouse_genomes_project 16 13729752 13732898 - MGP_WSBEiJ_P0042413 Igll1 protein_coding protein_coding MGP_WSBEiJ_T0042414.1 MGP_WSBEiJ_G0021869.1 mouse_genomes_project 16 13729755 13733066 - Igll1 protein_coding retained_intron MGP_WSBEiJ_T0009985.1 MGP_WSBEiJ_G0008142.1 mouse_genomes_project 16 52390161 52390226 + Gm25041 miRNA miRNA MGP_WSBEiJ_T0012864.1 MGP_WSBEiJ_G0010994.1 mouse_genomes_project 16 33732701 33733065 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043174.1 MGP_WSBEiJ_G0022045.1 mouse_genomes_project 16 30120182 30130888 + MGP_WSBEiJ_P0043174 Zdhhc19 protein_coding protein_coding MGP_WSBEiJ_T0043175.1 MGP_WSBEiJ_G0022045.1 mouse_genomes_project 16 30123275 30191775 + Zdhhc19 protein_coding processed_transcript MGP_WSBEiJ_T0042701.1 MGP_WSBEiJ_G0021920.1 mouse_genomes_project 16 15555962 15561201 - MGP_WSBEiJ_P0042701 Tbx1 protein_coding protein_coding MGP_WSBEiJ_T0012838.1 MGP_WSBEiJ_G0010968.1 mouse_genomes_project 16 13405837 13406257 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043693.1 MGP_WSBEiJ_G0022167.1 mouse_genomes_project 16 47068410 47111074 - MGP_WSBEiJ_P0043693 Trat1 protein_coding protein_coding MGP_WSBEiJ_T0006769.1 MGP_WSBEiJ_G0005582.1 mouse_genomes_project 16 75422672 75432610 + Gm15555 lincRNA lincRNA MGP_WSBEiJ_T0043425.1 MGP_WSBEiJ_G0022101.1 mouse_genomes_project 16 35560502 35592695 + MGP_WSBEiJ_P0043425 Rabl3 protein_coding protein_coding MGP_WSBEiJ_T0043426.1 MGP_WSBEiJ_G0022101.1 mouse_genomes_project 16 35560517 35592692 + MGP_WSBEiJ_P0043426 Rabl3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043427.1 MGP_WSBEiJ_G0022101.1 mouse_genomes_project 16 35560522 35584377 + Rabl3 protein_coding retained_intron MGP_WSBEiJ_T0043428.1 MGP_WSBEiJ_G0022101.1 mouse_genomes_project 16 35584062 35588267 + Rabl3 protein_coding retained_intron MGP_WSBEiJ_T0097958.1 MGP_WSBEiJ_G0036621.1 mouse_genomes_project 16 34363160 34363264 + Gm22263 snRNA snRNA MGP_WSBEiJ_T0097936.1 MGP_WSBEiJ_G0036599.1 mouse_genomes_project 16 6959306 6959409 + Gm24392 snRNA snRNA MGP_WSBEiJ_T0097966.1 MGP_WSBEiJ_G0036629.1 mouse_genomes_project 16 47293107 47293211 - Gm22576 snRNA snRNA MGP_WSBEiJ_T0044416.1 MGP_WSBEiJ_G0022384.1 mouse_genomes_project 16 96608230 96636322 + MGP_WSBEiJ_P0044416 Sh3bgr protein_coding protein_coding MGP_WSBEiJ_T0044417.1 MGP_WSBEiJ_G0022384.1 mouse_genomes_project 16 96608431 96632058 + MGP_WSBEiJ_P0044417 Sh3bgr protein_coding protein_coding MGP_WSBEiJ_T0044418.1 MGP_WSBEiJ_G0022384.1 mouse_genomes_project 16 96608431 96636317 + MGP_WSBEiJ_P0044418 Sh3bgr protein_coding protein_coding MGP_WSBEiJ_T0044419.1 MGP_WSBEiJ_G0022384.1 mouse_genomes_project 16 96608464 96627598 + MGP_WSBEiJ_P0044419 Sh3bgr protein_coding protein_coding MGP_WSBEiJ_T0044420.1 MGP_WSBEiJ_G0022384.1 mouse_genomes_project 16 96608489 96632089 + MGP_WSBEiJ_P0044420 Sh3bgr protein_coding protein_coding MGP_WSBEiJ_T0044421.1 MGP_WSBEiJ_G0022384.1 mouse_genomes_project 16 96612778 96627598 + MGP_WSBEiJ_P0044421 Sh3bgr protein_coding protein_coding MGP_WSBEiJ_T0044422.1 MGP_WSBEiJ_G0022384.1 mouse_genomes_project 16 96613685 96632061 + MGP_WSBEiJ_P0044422 Sh3bgr protein_coding protein_coding MGP_WSBEiJ_T0044423.1 MGP_WSBEiJ_G0022384.1 mouse_genomes_project 16 96627505 96636314 + MGP_WSBEiJ_P0044423 Sh3bgr protein_coding protein_coding MGP_WSBEiJ_T0009951.1 MGP_WSBEiJ_G0008108.1 mouse_genomes_project 16 10271285 10271372 + Mir365-1 miRNA miRNA MGP_WSBEiJ_T0012847.1 MGP_WSBEiJ_G0010977.1 mouse_genomes_project 16 16182269 16186922 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043274.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31720219 31839626 - MGP_WSBEiJ_P0043274 protein_coding protein_coding MGP_WSBEiJ_T0043275.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31721125 31724687 - protein_coding retained_intron MGP_WSBEiJ_T0043276.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31721457 32217408 - MGP_WSBEiJ_P0043276 protein_coding protein_coding MGP_WSBEiJ_T0043277.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31759887 31911599 - MGP_WSBEiJ_P0043277 protein_coding protein_coding MGP_WSBEiJ_T0043278.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31759892 31840729 - MGP_WSBEiJ_P0043278 protein_coding protein_coding MGP_WSBEiJ_T0043279.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31759892 32153518 - MGP_WSBEiJ_P0043279 protein_coding protein_coding MGP_WSBEiJ_T0043280.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31759901 31839667 - MGP_WSBEiJ_P0043280 protein_coding protein_coding MGP_WSBEiJ_T0043281.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31760416 31839519 - MGP_WSBEiJ_P0043281 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043282.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31792493 32339748 - MGP_WSBEiJ_P0043282 protein_coding protein_coding MGP_WSBEiJ_T0043283.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31899324 32276925 - MGP_WSBEiJ_P0043283 protein_coding protein_coding MGP_WSBEiJ_T0043284.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31899325 32013221 - MGP_WSBEiJ_P0043284 protein_coding protein_coding MGP_WSBEiJ_T0043285.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31899335 32276963 - MGP_WSBEiJ_P0043285 protein_coding protein_coding MGP_WSBEiJ_T0043286.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31899395 32012986 - MGP_WSBEiJ_P0043286 protein_coding protein_coding MGP_WSBEiJ_T0043287.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31901732 32013214 - MGP_WSBEiJ_P0043287 protein_coding protein_coding MGP_WSBEiJ_T0043288.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31901799 32276821 - MGP_WSBEiJ_P0043288 protein_coding protein_coding MGP_WSBEiJ_T0043289.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31926273 32012860 - MGP_WSBEiJ_P0043289 protein_coding protein_coding MGP_WSBEiJ_T0043290.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31968772 32012931 - protein_coding retained_intron MGP_WSBEiJ_T0043291.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 31994115 32002336 - protein_coding processed_transcript MGP_WSBEiJ_T0043292.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 32115290 32120342 - protein_coding processed_transcript MGP_WSBEiJ_T0043293.1 MGP_WSBEiJ_G0022065.1 mouse_genomes_project 16 32275651 32276992 - protein_coding processed_transcript MGP_WSBEiJ_T0044007.1 MGP_WSBEiJ_G0022277.1 mouse_genomes_project 16 87263155 87278411 + MGP_WSBEiJ_P0044007 N6amt1 protein_coding protein_coding MGP_WSBEiJ_T0044008.1 MGP_WSBEiJ_G0022277.1 mouse_genomes_project 16 87263178 87274568 + MGP_WSBEiJ_P0044008 N6amt1 protein_coding protein_coding MGP_WSBEiJ_T0044009.1 MGP_WSBEiJ_G0022277.1 mouse_genomes_project 16 87263180 87276581 + MGP_WSBEiJ_P0044009 N6amt1 protein_coding protein_coding MGP_WSBEiJ_T0016900.1 MGP_WSBEiJ_G0014737.1 mouse_genomes_project 16 24145596 24188785 - Gm20319 processed_transcript processed_transcript MGP_WSBEiJ_T0016901.1 MGP_WSBEiJ_G0014737.1 mouse_genomes_project 16 24145894 24188796 - Gm20319 processed_transcript processed_transcript MGP_WSBEiJ_T0016902.1 MGP_WSBEiJ_G0014737.1 mouse_genomes_project 16 24161370 24188796 - Gm20319 processed_transcript processed_transcript MGP_WSBEiJ_T0096980.1 MGP_WSBEiJ_G0035661.1 mouse_genomes_project 16 27646648 27646751 - n-R5s32 rRNA rRNA MGP_WSBEiJ_T0006727.1 MGP_WSBEiJ_G0005549.1 mouse_genomes_project 16 9635340 9674459 + 1700003L19Rik lincRNA lincRNA MGP_WSBEiJ_T0042801.1 MGP_WSBEiJ_G0021950.1 mouse_genomes_project 16 17623630 17636421 + MGP_WSBEiJ_P0042801 Abcf3 protein_coding protein_coding MGP_WSBEiJ_T0042802.1 MGP_WSBEiJ_G0021950.1 mouse_genomes_project 16 17624724 17626745 + Abcf3 protein_coding retained_intron MGP_WSBEiJ_T0042803.1 MGP_WSBEiJ_G0021950.1 mouse_genomes_project 16 17625633 17633922 + Abcf3 protein_coding retained_intron MGP_WSBEiJ_T0042804.1 MGP_WSBEiJ_G0021950.1 mouse_genomes_project 16 17634392 17635312 + Abcf3 protein_coding retained_intron MGP_WSBEiJ_T0042805.1 MGP_WSBEiJ_G0021950.1 mouse_genomes_project 16 17634705 17635860 + Abcf3 protein_coding retained_intron MGP_WSBEiJ_T0096986.1 MGP_WSBEiJ_G0035667.1 mouse_genomes_project 16 84635409 84635507 + Gm25908 rRNA rRNA MGP_WSBEiJ_T0043450.1 MGP_WSBEiJ_G0022110.1 mouse_genomes_project 16 36356036 36400941 - MGP_WSBEiJ_P0043450 Maats1 protein_coding protein_coding MGP_WSBEiJ_T0043451.1 MGP_WSBEiJ_G0022110.1 mouse_genomes_project 16 36380465 36400908 - MGP_WSBEiJ_P0043451 Maats1 protein_coding protein_coding MGP_WSBEiJ_T0043452.1 MGP_WSBEiJ_G0022110.1 mouse_genomes_project 16 36390364 36401241 - Maats1 protein_coding processed_transcript MGP_WSBEiJ_T0043350.1 MGP_WSBEiJ_G0022087.1 mouse_genomes_project 16 34066849 34074211 + MGP_WSBEiJ_P0043350 Gm5416 protein_coding protein_coding MGP_WSBEiJ_T0043016.1 MGP_WSBEiJ_G0022002.1 mouse_genomes_project 16 24751878 24794013 + MGP_WSBEiJ_P0043016 Ostn protein_coding protein_coding MGP_WSBEiJ_T0043897.1 MGP_WSBEiJ_G0022238.1 mouse_genomes_project 16 61588681 61600606 + MGP_WSBEiJ_P0043897 Stx19 protein_coding protein_coding MGP_WSBEiJ_T0003582.1 MGP_WSBEiJ_G0003246.1 mouse_genomes_project 16 13983692 13987228 + Gm15585 antisense antisense MGP_WSBEiJ_T0044048.1 MGP_WSBEiJ_G0022292.1 mouse_genomes_project 16 88718262 88719010 + MGP_WSBEiJ_P0044048 Krtap13-1 protein_coding protein_coding MGP_WSBEiJ_T0097941.1 MGP_WSBEiJ_G0036604.1 mouse_genomes_project 16 14250621 14250728 - Gm24927 snRNA snRNA MGP_WSBEiJ_T0043763.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54645351 54785348 + MGP_WSBEiJ_P0043763 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043764.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54665869 54667600 + protein_coding processed_transcript MGP_WSBEiJ_T0043765.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54665874 54719996 + MGP_WSBEiJ_P0043765 protein_coding protein_coding MGP_WSBEiJ_T0043766.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54665929 54719991 + protein_coding processed_transcript MGP_WSBEiJ_T0043767.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54665940 54693503 + protein_coding retained_intron MGP_WSBEiJ_T0043768.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54665940 54732474 + MGP_WSBEiJ_P0043768 protein_coding protein_coding MGP_WSBEiJ_T0043769.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54665945 54719872 + protein_coding processed_transcript MGP_WSBEiJ_T0043770.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54665945 54735337 + MGP_WSBEiJ_P0043770 protein_coding protein_coding MGP_WSBEiJ_T0043771.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54775331 54784086 + protein_coding retained_intron MGP_WSBEiJ_T0043772.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54775805 54783695 + protein_coding retained_intron MGP_WSBEiJ_T0043773.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54777790 54785340 + protein_coding processed_transcript MGP_WSBEiJ_T0043774.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54778967 54783600 + protein_coding processed_transcript MGP_WSBEiJ_T0043775.1 MGP_WSBEiJ_G0022188.1 mouse_genomes_project 16 54781484 54784075 + protein_coding processed_transcript MGP_WSBEiJ_T0043087.1 MGP_WSBEiJ_G0022021.1 mouse_genomes_project 16 28650350 28756911 - MGP_WSBEiJ_P0043087 Acap2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043877.1 MGP_WSBEiJ_G0022233.1 mouse_genomes_project 16 58152920 58190362 - Crybg3 protein_coding retained_intron MGP_WSBEiJ_T0043878.1 MGP_WSBEiJ_G0022233.1 mouse_genomes_project 16 58154233 58223664 - MGP_WSBEiJ_P0043878 Crybg3 protein_coding protein_coding MGP_WSBEiJ_T0043879.1 MGP_WSBEiJ_G0022233.1 mouse_genomes_project 16 58191218 58205529 - Crybg3 protein_coding processed_transcript MGP_WSBEiJ_T0043880.1 MGP_WSBEiJ_G0022233.1 mouse_genomes_project 16 58209733 58221882 - MGP_WSBEiJ_P0043880 Crybg3 protein_coding protein_coding MGP_WSBEiJ_T0012833.1 MGP_WSBEiJ_G0010963.1 mouse_genomes_project 16 10929780 10930384 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012885.1 MGP_WSBEiJ_G0011015.1 mouse_genomes_project 16 66550556 66551078 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011216.1 MGP_WSBEiJ_G0009373.1 mouse_genomes_project 16 84420931 84421253 - Gm25292 misc_RNA misc_RNA MGP_WSBEiJ_T0012859.1 MGP_WSBEiJ_G0010989.1 mouse_genomes_project 16 29506092 29506970 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0042698.1 MGP_WSBEiJ_G0021919.1 mouse_genomes_project 16 15470982 15473740 + MGP_WSBEiJ_P0042698 Gm16314 protein_coding protein_coding MGP_WSBEiJ_T0043162.1 MGP_WSBEiJ_G0022039.1 mouse_genomes_project 16 29875899 29888389 + MGP_WSBEiJ_P0043162 Rnf168 protein_coding protein_coding MGP_WSBEiJ_T0043163.1 MGP_WSBEiJ_G0022039.1 mouse_genomes_project 16 29875901 29897800 + MGP_WSBEiJ_P0043163 Rnf168 protein_coding protein_coding MGP_WSBEiJ_T0043164.1 MGP_WSBEiJ_G0022039.1 mouse_genomes_project 16 29875901 29898328 + MGP_WSBEiJ_P0043164 Rnf168 protein_coding protein_coding MGP_WSBEiJ_T0043689.1 MGP_WSBEiJ_G0022164.1 mouse_genomes_project 16 46605828 46618034 + MGP_WSBEiJ_P0043689 Dppa4 protein_coding protein_coding MGP_WSBEiJ_T0043690.1 MGP_WSBEiJ_G0022164.1 mouse_genomes_project 16 46605828 46618034 + MGP_WSBEiJ_P0043690 Dppa4 protein_coding protein_coding MGP_WSBEiJ_T0043322.1 MGP_WSBEiJ_G0022077.1 mouse_genomes_project 16 33741384 33756112 - MGP_WSBEiJ_P0043322 Dtx3l protein_coding protein_coding MGP_WSBEiJ_T0043323.1 MGP_WSBEiJ_G0022077.1 mouse_genomes_project 16 33748831 33756112 - MGP_WSBEiJ_P0043323 Dtx3l protein_coding protein_coding MGP_WSBEiJ_T0096788.1 MGP_WSBEiJ_G0035469.1 mouse_genomes_project 16 34109158 34109252 - pseudogene pseudogene MGP_WSBEiJ_T0044023.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87399535 87413155 - MGP_WSBEiJ_P0044023 Cct8 protein_coding protein_coding MGP_WSBEiJ_T0044024.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87400217 87413070 - MGP_WSBEiJ_P0044024 Cct8 protein_coding protein_coding MGP_WSBEiJ_T0044025.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87400217 87413070 - MGP_WSBEiJ_P0044025 Cct8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044026.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87401134 87406128 - MGP_WSBEiJ_P0044026 Cct8 protein_coding protein_coding MGP_WSBEiJ_T0044027.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87402721 87403353 - Cct8 protein_coding retained_intron MGP_WSBEiJ_T0044028.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87402861 87403638 - Cct8 protein_coding retained_intron MGP_WSBEiJ_T0044029.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87403009 87403780 - Cct8 protein_coding retained_intron MGP_WSBEiJ_T0044030.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87406129 87408733 - Cct8 protein_coding processed_transcript MGP_WSBEiJ_T0044031.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87406215 87413141 - MGP_WSBEiJ_P0044031 Cct8 protein_coding protein_coding MGP_WSBEiJ_T0044032.1 MGP_WSBEiJ_G0022281.1 mouse_genomes_project 16 87407772 87412986 - MGP_WSBEiJ_P0044032 Cct8 protein_coding protein_coding MGP_WSBEiJ_T0044066.1 MGP_WSBEiJ_G0022308.1 mouse_genomes_project 16 89013792 89017561 + MGP_WSBEiJ_P0044066 Gm10229 protein_coding protein_coding MGP_WSBEiJ_T0042471.1 MGP_WSBEiJ_G0021878.1 mouse_genomes_project 16 14035577 14042250 + MGP_WSBEiJ_P0042471 Ydjc protein_coding protein_coding MGP_WSBEiJ_T0042472.1 MGP_WSBEiJ_G0021878.1 mouse_genomes_project 16 14036799 14039803 + Ydjc protein_coding retained_intron MGP_WSBEiJ_T0042473.1 MGP_WSBEiJ_G0021878.1 mouse_genomes_project 16 14037893 14053702 + MGP_WSBEiJ_P0042473 Ydjc protein_coding protein_coding MGP_WSBEiJ_T0042474.1 MGP_WSBEiJ_G0021878.1 mouse_genomes_project 16 14037905 14042666 + Ydjc protein_coding retained_intron MGP_WSBEiJ_T0042475.1 MGP_WSBEiJ_G0021878.1 mouse_genomes_project 16 14037932 14039803 + Ydjc protein_coding retained_intron MGP_WSBEiJ_T0042476.1 MGP_WSBEiJ_G0021878.1 mouse_genomes_project 16 14037935 14039803 + MGP_WSBEiJ_P0042476 Ydjc protein_coding protein_coding MGP_WSBEiJ_T0043434.1 MGP_WSBEiJ_G0022103.1 mouse_genomes_project 16 35668893 35676178 - MGP_WSBEiJ_P0043434 Ndufb4 protein_coding protein_coding MGP_WSBEiJ_T0043435.1 MGP_WSBEiJ_G0022103.1 mouse_genomes_project 16 35669324 35671084 - Ndufb4 protein_coding retained_intron MGP_WSBEiJ_T0012878.1 MGP_WSBEiJ_G0011008.1 mouse_genomes_project 16 47780563 47780944 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012887.1 MGP_WSBEiJ_G0011017.1 mouse_genomes_project 16 75146647 75147077 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043033.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26858222 26912452 - MGP_WSBEiJ_P0043033 Atp13a4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043034.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26858397 26993646 - MGP_WSBEiJ_P0043034 Atp13a4 protein_coding protein_coding MGP_WSBEiJ_T0043035.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26858410 26993532 - MGP_WSBEiJ_P0043035 Atp13a4 protein_coding protein_coding MGP_WSBEiJ_T0043036.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26858415 26871721 - Atp13a4 protein_coding processed_transcript MGP_WSBEiJ_T0043037.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26858431 27000707 - MGP_WSBEiJ_P0043037 Atp13a4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043038.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26858757 26871174 - Atp13a4 protein_coding retained_intron MGP_WSBEiJ_T0043039.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26872063 26899001 - Atp13a4 protein_coding retained_intron MGP_WSBEiJ_T0043040.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26885991 26900038 - MGP_WSBEiJ_P0043040 Atp13a4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043041.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26886000 27000707 - MGP_WSBEiJ_P0043041 Atp13a4 protein_coding protein_coding MGP_WSBEiJ_T0043042.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26992472 27000641 - Atp13a4 protein_coding retained_intron MGP_WSBEiJ_T0043043.1 MGP_WSBEiJ_G0022009.1 mouse_genomes_project 16 26992525 27000702 - Atp13a4 protein_coding retained_intron MGP_WSBEiJ_T0042594.1 MGP_WSBEiJ_G0021898.1 mouse_genomes_project 16 14760102 14763191 - MGP_WSBEiJ_P0042594 Car15 protein_coding protein_coding MGP_WSBEiJ_T0099184.1 MGP_WSBEiJ_G0037847.1 mouse_genomes_project 16 16364295 16364421 + Gm22158 snoRNA snoRNA MGP_WSBEiJ_T0043676.1 MGP_WSBEiJ_G0022160.1 mouse_genomes_project 16 44276591 44328834 - MGP_WSBEiJ_P0043676 Plcxd2 protein_coding protein_coding MGP_WSBEiJ_T0042585.1 MGP_WSBEiJ_G0021896.1 mouse_genomes_project 16 14679508 14691634 + MGP_WSBEiJ_P0042585 Klhl22 protein_coding protein_coding MGP_WSBEiJ_T0042586.1 MGP_WSBEiJ_G0021896.1 mouse_genomes_project 16 14679511 14713936 + MGP_WSBEiJ_P0042586 Klhl22 protein_coding protein_coding MGP_WSBEiJ_T0042587.1 MGP_WSBEiJ_G0021896.1 mouse_genomes_project 16 14679528 14691676 + MGP_WSBEiJ_P0042587 Klhl22 protein_coding protein_coding MGP_WSBEiJ_T0042588.1 MGP_WSBEiJ_G0021896.1 mouse_genomes_project 16 14679553 14698947 + Klhl22 protein_coding retained_intron MGP_WSBEiJ_T0042589.1 MGP_WSBEiJ_G0021896.1 mouse_genomes_project 16 14679561 14713936 + MGP_WSBEiJ_P0042589 Klhl22 protein_coding protein_coding MGP_WSBEiJ_T0042590.1 MGP_WSBEiJ_G0021896.1 mouse_genomes_project 16 14680245 14691627 + MGP_WSBEiJ_P0042590 Klhl22 protein_coding protein_coding MGP_WSBEiJ_T0042591.1 MGP_WSBEiJ_G0021896.1 mouse_genomes_project 16 14682681 14713938 + MGP_WSBEiJ_P0042591 Klhl22 protein_coding protein_coding MGP_WSBEiJ_T0042592.1 MGP_WSBEiJ_G0021896.1 mouse_genomes_project 16 14683928 14691651 + Klhl22 protein_coding retained_intron MGP_WSBEiJ_T0097942.1 MGP_WSBEiJ_G0036605.1 mouse_genomes_project 16 14395279 14395346 - Gm22770 snRNA snRNA MGP_WSBEiJ_T0044260.1 MGP_WSBEiJ_G0022359.1 mouse_genomes_project 16 92562936 92640372 - MGP_WSBEiJ_P0044260 Rcan1 protein_coding protein_coding MGP_WSBEiJ_T0044261.1 MGP_WSBEiJ_G0022359.1 mouse_genomes_project 16 92562936 92571065 - MGP_WSBEiJ_P0044261 Rcan1 protein_coding protein_coding MGP_WSBEiJ_T0100600.1 MGP_WSBEiJ_G0039058.1 mouse_genomes_project 16 57683221 57684088 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016897.1 MGP_WSBEiJ_G0014734.1 mouse_genomes_project 16 17582763 17592344 - Gm16618 processed_transcript processed_transcript MGP_WSBEiJ_T0012843.1 MGP_WSBEiJ_G0010973.1 mouse_genomes_project 16 15958029 15958318 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003607.1 MGP_WSBEiJ_G0003266.1 mouse_genomes_project 16 44044157 44044776 + Gm15591 antisense antisense MGP_WSBEiJ_T0016909.1 MGP_WSBEiJ_G0014741.1 mouse_genomes_project 16 57012740 57016122 - 4930461C15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0042079.1 MGP_WSBEiJ_G0021781.1 mouse_genomes_project 16 1249454 1267844 - MGP_WSBEiJ_P0042079 Cdip1 protein_coding protein_coding MGP_WSBEiJ_T0042082.1 MGP_WSBEiJ_G0021781.1 mouse_genomes_project 16 1263207 1287812 - MGP_WSBEiJ_P0042082 Cdip1 protein_coding protein_coding MGP_WSBEiJ_T0042083.1 MGP_WSBEiJ_G0021781.1 mouse_genomes_project 16 1264587 1269259 - Cdip1 protein_coding retained_intron MGP_WSBEiJ_T0042084.1 MGP_WSBEiJ_G0021781.1 mouse_genomes_project 16 1264587 1288114 - MGP_WSBEiJ_P0042084 Cdip1 protein_coding protein_coding MGP_WSBEiJ_T0042085.1 MGP_WSBEiJ_G0021781.1 mouse_genomes_project 16 1265085 1287752 - MGP_WSBEiJ_P0042085 Cdip1 protein_coding protein_coding MGP_WSBEiJ_T0042086.1 MGP_WSBEiJ_G0021781.1 mouse_genomes_project 16 1267055 1288088 - Cdip1 protein_coding retained_intron MGP_WSBEiJ_T0043857.1 MGP_WSBEiJ_G0022219.1 mouse_genomes_project 16 57683229 57684088 - MGP_WSBEiJ_P0043857 Olfr190 protein_coding protein_coding MGP_WSBEiJ_T0044302.1 MGP_WSBEiJ_G0022368.1 mouse_genomes_project 16 94378896 94422532 + MGP_WSBEiJ_P0044302 Sim2 protein_coding protein_coding MGP_WSBEiJ_T0006741.1 MGP_WSBEiJ_G0005560.1 mouse_genomes_project 16 27280703 27311166 + Gm26834 lincRNA lincRNA MGP_WSBEiJ_T0043155.1 MGP_WSBEiJ_G0022035.1 mouse_genomes_project 16 29779044 29779811 + MGP_WSBEiJ_P0043155 Bex6 protein_coding protein_coding MGP_WSBEiJ_T0012880.1 MGP_WSBEiJ_G0011010.1 mouse_genomes_project 16 55542317 55543260 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016935.1 MGP_WSBEiJ_G0014750.1 mouse_genomes_project 16 91816057 91847300 + Gm10785 processed_transcript processed_transcript MGP_WSBEiJ_T0042710.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15830257 15833831 + MGP_WSBEiJ_P0042710 Ufd1l protein_coding protein_coding MGP_WSBEiJ_T0042711.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15830302 15853519 + MGP_WSBEiJ_P0042711 Ufd1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042712.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15830310 15854465 + MGP_WSBEiJ_P0042712 Ufd1l protein_coding protein_coding MGP_WSBEiJ_T0042713.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15830772 15834384 + Ufd1l protein_coding processed_transcript MGP_WSBEiJ_T0042714.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15830772 15854470 + MGP_WSBEiJ_P0042714 Ufd1l protein_coding protein_coding MGP_WSBEiJ_T0042715.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15830799 15846944 + MGP_WSBEiJ_P0042715 Ufd1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042716.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15830834 15843515 + MGP_WSBEiJ_P0042716 Ufd1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042717.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15841698 15853463 + Ufd1l protein_coding retained_intron MGP_WSBEiJ_T0042718.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15846311 15847702 + MGP_WSBEiJ_P0042718 Ufd1l protein_coding protein_coding MGP_WSBEiJ_T0042719.1 MGP_WSBEiJ_G0021925.1 mouse_genomes_project 16 15846499 15853613 + Ufd1l protein_coding retained_intron MGP_WSBEiJ_T0000945.1 MGP_WSBEiJ_G0000881.1 mouse_genomes_project 16 77175245 77177378 + TEC TEC MGP_WSBEiJ_T0042296.1 MGP_WSBEiJ_G0021839.1 mouse_genomes_project 16 10353776 10491636 - MGP_WSBEiJ_P0042296 Parn protein_coding protein_coding MGP_WSBEiJ_T0096978.1 MGP_WSBEiJ_G0035659.1 mouse_genomes_project 16 10827369 10827479 - Gm26213 rRNA rRNA MGP_WSBEiJ_T0009957.1 MGP_WSBEiJ_G0008114.1 mouse_genomes_project 16 14016830 14016927 - Mir301b miRNA miRNA MGP_WSBEiJ_T0042922.1 MGP_WSBEiJ_G0021973.1 mouse_genomes_project 16 19711165 19906955 - MGP_WSBEiJ_P0042922 Dgkg protein_coding protein_coding MGP_WSBEiJ_T0042923.1 MGP_WSBEiJ_G0021973.1 mouse_genomes_project 16 19711925 19907003 - MGP_WSBEiJ_P0042923 Dgkg protein_coding protein_coding MGP_WSBEiJ_T0042924.1 MGP_WSBEiJ_G0021973.1 mouse_genomes_project 16 19794335 19906970 - MGP_WSBEiJ_P0042924 Dgkg protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042925.1 MGP_WSBEiJ_G0021973.1 mouse_genomes_project 16 19843593 19906810 - Dgkg protein_coding processed_transcript MGP_WSBEiJ_T0043301.1 MGP_WSBEiJ_G0022070.1 mouse_genomes_project 16 32931009 33090901 + MGP_WSBEiJ_P0043301 Adcy5 protein_coding protein_coding MGP_WSBEiJ_T0099195.1 MGP_WSBEiJ_G0037858.1 mouse_genomes_project 16 29656451 29656584 + Gm26419 snoRNA snoRNA MGP_WSBEiJ_T0012881.1 MGP_WSBEiJ_G0011011.1 mouse_genomes_project 16 59105459 59105862 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043161.1 MGP_WSBEiJ_G0022038.1 mouse_genomes_project 16 29870007 29873267 + MGP_WSBEiJ_P0043161 Smco1 protein_coding protein_coding MGP_WSBEiJ_T0042987.1 MGP_WSBEiJ_G0021993.1 mouse_genomes_project 16 21777004 22396836 + MGP_WSBEiJ_P0042987 Lpp protein_coding protein_coding MGP_WSBEiJ_T0042988.1 MGP_WSBEiJ_G0021993.1 mouse_genomes_project 16 21835259 22396836 + MGP_WSBEiJ_P0042988 Lpp protein_coding protein_coding MGP_WSBEiJ_T0042989.1 MGP_WSBEiJ_G0021993.1 mouse_genomes_project 16 22114437 22396836 + MGP_WSBEiJ_P0042989 Lpp protein_coding protein_coding MGP_WSBEiJ_T0000929.1 MGP_WSBEiJ_G0000866.1 mouse_genomes_project 16 56544507 56544917 + TEC TEC MGP_WSBEiJ_T0043889.1 MGP_WSBEiJ_G0022236.1 mouse_genomes_project 16 61508252 61558647 - MGP_WSBEiJ_P0043889 Nsun3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043890.1 MGP_WSBEiJ_G0022236.1 mouse_genomes_project 16 61508252 61558647 - MGP_WSBEiJ_P0043890 Nsun3 protein_coding protein_coding MGP_WSBEiJ_T0043891.1 MGP_WSBEiJ_G0022236.1 mouse_genomes_project 16 61511161 61538960 - Nsun3 protein_coding processed_transcript MGP_WSBEiJ_T0043892.1 MGP_WSBEiJ_G0022236.1 mouse_genomes_project 16 61542529 61558636 - MGP_WSBEiJ_P0043892 Nsun3 protein_coding protein_coding MGP_WSBEiJ_T0043893.1 MGP_WSBEiJ_G0022236.1 mouse_genomes_project 16 61548006 61558688 - Nsun3 protein_coding processed_transcript MGP_WSBEiJ_T0043894.1 MGP_WSBEiJ_G0022236.1 mouse_genomes_project 16 61551091 61558583 - Nsun3 protein_coding processed_transcript MGP_WSBEiJ_T0097961.1 MGP_WSBEiJ_G0036624.1 mouse_genomes_project 16 36990524 36990623 + Gm22500 snRNA snRNA MGP_WSBEiJ_T0012895.1 MGP_WSBEiJ_G0011025.1 mouse_genomes_project 16 91657954 91658833 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043868.1 MGP_WSBEiJ_G0022229.1 mouse_genomes_project 16 58004860 58005865 - MGP_WSBEiJ_P0043868 Olfr206 protein_coding protein_coding MGP_WSBEiJ_T0000923.1 MGP_WSBEiJ_G0000860.1 mouse_genomes_project 16 16281873 16285187 + TEC TEC MGP_WSBEiJ_T0044049.1 MGP_WSBEiJ_G0022293.1 mouse_genomes_project 16 88741712 88742865 - MGP_WSBEiJ_P0044049 Krtap13 protein_coding protein_coding MGP_WSBEiJ_T0044403.1 MGP_WSBEiJ_G0022381.1 mouse_genomes_project 16 96524856 96531386 - MGP_WSBEiJ_P0044403 Hmgn1 protein_coding protein_coding MGP_WSBEiJ_T0044404.1 MGP_WSBEiJ_G0022381.1 mouse_genomes_project 16 96525992 96529014 - Hmgn1 protein_coding retained_intron MGP_WSBEiJ_T0044405.1 MGP_WSBEiJ_G0022381.1 mouse_genomes_project 16 96526048 96531261 - MGP_WSBEiJ_P0044405 Hmgn1 protein_coding protein_coding MGP_WSBEiJ_T0044406.1 MGP_WSBEiJ_G0022381.1 mouse_genomes_project 16 96530261 96531123 - Hmgn1 protein_coding retained_intron MGP_WSBEiJ_T0043801.1 MGP_WSBEiJ_G0022198.1 mouse_genomes_project 16 55898060 55922215 - MGP_WSBEiJ_P0043801 Tmem30c protein_coding protein_coding MGP_WSBEiJ_T0043802.1 MGP_WSBEiJ_G0022198.1 mouse_genomes_project 16 55898332 55922201 - MGP_WSBEiJ_P0043802 Tmem30c protein_coding protein_coding MGP_WSBEiJ_T0043803.1 MGP_WSBEiJ_G0022198.1 mouse_genomes_project 16 55901214 55922201 - MGP_WSBEiJ_P0043803 Tmem30c protein_coding protein_coding MGP_WSBEiJ_T0043297.1 MGP_WSBEiJ_G0022068.1 mouse_genomes_project 16 32514176 32649344 + Mylk protein_coding retained_intron MGP_WSBEiJ_T0043298.1 MGP_WSBEiJ_G0022068.1 mouse_genomes_project 16 32553277 32772960 + MGP_WSBEiJ_P0043298 Mylk protein_coding protein_coding MGP_WSBEiJ_T0043299.1 MGP_WSBEiJ_G0022068.1 mouse_genomes_project 16 32575591 32769367 + MGP_WSBEiJ_P0043299 Mylk protein_coding unknown_likely_coding MGP_WSBEiJ_T0043145.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29736937 29757075 - MGP_WSBEiJ_P0043145 Nrros protein_coding protein_coding MGP_WSBEiJ_T0043146.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29736947 29757047 - MGP_WSBEiJ_P0043146 Nrros protein_coding protein_coding MGP_WSBEiJ_T0043147.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29736947 29742034 - MGP_WSBEiJ_P0043147 Nrros protein_coding protein_coding MGP_WSBEiJ_T0043148.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29736977 29756966 - MGP_WSBEiJ_P0043148 Nrros protein_coding protein_coding MGP_WSBEiJ_T0043149.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29736977 29756984 - MGP_WSBEiJ_P0043149 Nrros protein_coding protein_coding MGP_WSBEiJ_T0043150.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29738834 29757084 - MGP_WSBEiJ_P0043150 Nrros protein_coding protein_coding MGP_WSBEiJ_T0043151.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29738967 29756966 - Nrros protein_coding processed_transcript MGP_WSBEiJ_T0043152.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29738979 29742227 - Nrros protein_coding processed_transcript MGP_WSBEiJ_T0043153.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29739026 29756972 - MGP_WSBEiJ_P0043153 Nrros protein_coding protein_coding MGP_WSBEiJ_T0043154.1 MGP_WSBEiJ_G0022034.1 mouse_genomes_project 16 29741704 29756947 - Nrros protein_coding processed_transcript MGP_WSBEiJ_T0043908.1 MGP_WSBEiJ_G0022245.1 mouse_genomes_project 16 63774183 63949515 - MGP_WSBEiJ_P0043908 Htr1f protein_coding protein_coding MGP_WSBEiJ_T0043658.1 MGP_WSBEiJ_G0022157.1 mouse_genomes_project 16 44016027 44030231 - MGP_WSBEiJ_P0043658 Tagln3 protein_coding protein_coding MGP_WSBEiJ_T0043460.1 MGP_WSBEiJ_G0022113.1 mouse_genomes_project 16 36422733 36439983 + MGP_WSBEiJ_P0043460 Popdc2 protein_coding protein_coding MGP_WSBEiJ_T0043461.1 MGP_WSBEiJ_G0022113.1 mouse_genomes_project 16 36422769 36439983 + MGP_WSBEiJ_P0043461 Popdc2 protein_coding protein_coding MGP_WSBEiJ_T0043462.1 MGP_WSBEiJ_G0022113.1 mouse_genomes_project 16 36429154 36434535 + Popdc2 protein_coding processed_transcript MGP_WSBEiJ_T0043463.1 MGP_WSBEiJ_G0022113.1 mouse_genomes_project 16 36429770 36439530 + Popdc2 protein_coding processed_transcript MGP_WSBEiJ_T0043464.1 MGP_WSBEiJ_G0022113.1 mouse_genomes_project 16 36432342 36434478 + Popdc2 protein_coding processed_transcript MGP_WSBEiJ_T0043436.1 MGP_WSBEiJ_G0022104.1 mouse_genomes_project 16 35808632 35866857 + MGP_WSBEiJ_P0043436 Fstl1 protein_coding protein_coding MGP_WSBEiJ_T0043437.1 MGP_WSBEiJ_G0022104.1 mouse_genomes_project 16 35808834 35826560 + Fstl1 protein_coding processed_transcript MGP_WSBEiJ_T0043438.1 MGP_WSBEiJ_G0022104.1 mouse_genomes_project 16 35808911 35849233 + Fstl1 protein_coding retained_intron MGP_WSBEiJ_T0043439.1 MGP_WSBEiJ_G0022104.1 mouse_genomes_project 16 35845982 35864712 + Fstl1 protein_coding processed_transcript MGP_WSBEiJ_T0043440.1 MGP_WSBEiJ_G0022104.1 mouse_genomes_project 16 35852964 35865909 + Fstl1 protein_coding processed_transcript MGP_WSBEiJ_T0043967.1 MGP_WSBEiJ_G0022264.1 mouse_genomes_project 16 77878323 77896343 - MGP_WSBEiJ_P0043967 Gm7334 protein_coding protein_coding MGP_WSBEiJ_T0000931.1 MGP_WSBEiJ_G0000868.1 mouse_genomes_project 16 75538766 75540426 + TEC TEC MGP_WSBEiJ_T0099217.1 MGP_WSBEiJ_G0037880.1 mouse_genomes_project 16 73382423 73382558 - Gm22163 snoRNA snoRNA MGP_WSBEiJ_T0043058.1 MGP_WSBEiJ_G0022014.1 mouse_genomes_project 16 27792208 27806409 - MGP_WSBEiJ_P0043058 Lrrc15 protein_coding protein_coding MGP_WSBEiJ_T0097954.1 MGP_WSBEiJ_G0036617.1 mouse_genomes_project 16 33967619 33967722 - Gm25465 snRNA snRNA MGP_WSBEiJ_T0043377.1 MGP_WSBEiJ_G0022093.1 mouse_genomes_project 16 34755360 34844798 - Eaf2 protein_coding processed_transcript MGP_WSBEiJ_T0043378.1 MGP_WSBEiJ_G0022093.1 mouse_genomes_project 16 34755361 34844798 - Eaf2 protein_coding processed_transcript MGP_WSBEiJ_T0043379.1 MGP_WSBEiJ_G0022093.1 mouse_genomes_project 16 34755362 34773200 - MGP_WSBEiJ_P0043379 Eaf2 protein_coding protein_coding MGP_WSBEiJ_T0043380.1 MGP_WSBEiJ_G0022093.1 mouse_genomes_project 16 34755441 34793350 - Eaf2 protein_coding processed_transcript MGP_WSBEiJ_T0043381.1 MGP_WSBEiJ_G0022093.1 mouse_genomes_project 16 34755496 34793295 - MGP_WSBEiJ_P0043381 Eaf2 protein_coding protein_coding MGP_WSBEiJ_T0043382.1 MGP_WSBEiJ_G0022093.1 mouse_genomes_project 16 34787241 34844609 - Eaf2 protein_coding retained_intron MGP_WSBEiJ_T0042415.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741890 13758161 + MGP_WSBEiJ_P0042415 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042416.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741911 13765297 + MGP_WSBEiJ_P0042416 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042417.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741921 13751644 + MGP_WSBEiJ_P0042417 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042418.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741928 13755845 + MGP_WSBEiJ_P0042418 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042419.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741935 13765302 + MGP_WSBEiJ_P0042419 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042420.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741940 13757778 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042421.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741941 13752968 + MGP_WSBEiJ_P0042421 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042422.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741954 13751659 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042423.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741961 13751371 + MGP_WSBEiJ_P0042423 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042424.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741971 13765302 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042425.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13741994 13751306 + MGP_WSBEiJ_P0042425 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042426.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13742119 13751786 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042427.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13755760 13765285 + MGP_WSBEiJ_P0042427 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042428.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13756530 13765302 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042429.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13757837 13759018 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042430.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13758955 13760022 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042431.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13759221 13760199 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042432.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13760150 13765287 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0042433.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13762537 13764812 + MGP_WSBEiJ_P0042433 Top3b protein_coding protein_coding MGP_WSBEiJ_T0042434.1 MGP_WSBEiJ_G0021870.1 mouse_genomes_project 16 13763813 13764731 + Top3b protein_coding retained_intron MGP_WSBEiJ_T0044058.1 MGP_WSBEiJ_G0022300.1 mouse_genomes_project 16 88864207 88864785 - MGP_WSBEiJ_P0044058 Krtap19-2 protein_coding protein_coding MGP_WSBEiJ_T0003625.1 MGP_WSBEiJ_G0003280.1 mouse_genomes_project 16 98496168 98496649 - antisense antisense MGP_WSBEiJ_T0006767.1 MGP_WSBEiJ_G0005580.1 mouse_genomes_project 16 68931437 68935688 - Gm43265 lincRNA lincRNA MGP_WSBEiJ_T0100601.1 MGP_WSBEiJ_G0039059.1 mouse_genomes_project 16 57745613 57746987 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006742.1 MGP_WSBEiJ_G0005561.1 mouse_genomes_project 16 27388678 27429253 - Gm26569 lincRNA lincRNA MGP_WSBEiJ_T0043401.1 MGP_WSBEiJ_G0022097.1 mouse_genomes_project 16 34935813 34961365 - MGP_WSBEiJ_P0043401 Fbxo40 protein_coding protein_coding MGP_WSBEiJ_T0043402.1 MGP_WSBEiJ_G0022097.1 mouse_genomes_project 16 34938284 34946421 - Fbxo40 protein_coding processed_transcript MGP_WSBEiJ_T0043403.1 MGP_WSBEiJ_G0022097.1 mouse_genomes_project 16 34938393 34943134 - Fbxo40 protein_coding retained_intron MGP_WSBEiJ_T0043404.1 MGP_WSBEiJ_G0022097.1 mouse_genomes_project 16 34938426 34946781 - MGP_WSBEiJ_P0043404 Fbxo40 protein_coding protein_coding MGP_WSBEiJ_T0006781.1 MGP_WSBEiJ_G0005589.1 mouse_genomes_project 16 93616492 93653904 - 1700029J03Rik lincRNA lincRNA MGP_WSBEiJ_T0006782.1 MGP_WSBEiJ_G0005589.1 mouse_genomes_project 16 93621607 93688078 - 1700029J03Rik lincRNA lincRNA MGP_WSBEiJ_T0042109.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1528295 1533453 - MGP_WSBEiJ_P0042109 Rogdi protein_coding protein_coding MGP_WSBEiJ_T0042110.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1528295 1533463 - MGP_WSBEiJ_P0042110 Rogdi protein_coding protein_coding MGP_WSBEiJ_T0042111.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1528320 1533453 - MGP_WSBEiJ_P0042111 Rogdi protein_coding protein_coding MGP_WSBEiJ_T0042112.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1528550 1530222 - Rogdi protein_coding retained_intron MGP_WSBEiJ_T0042113.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1528789 1529679 - Rogdi protein_coding retained_intron MGP_WSBEiJ_T0042114.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1529468 1531386 - Rogdi protein_coding retained_intron MGP_WSBEiJ_T0042115.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1529605 1531302 - Rogdi protein_coding retained_intron MGP_WSBEiJ_T0042116.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1530417 1533421 - MGP_WSBEiJ_P0042116 Rogdi protein_coding protein_coding MGP_WSBEiJ_T0042117.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1531269 1533489 - Rogdi protein_coding retained_intron MGP_WSBEiJ_T0042118.1 MGP_WSBEiJ_G0021790.1 mouse_genomes_project 16 1532105 1533472 - Rogdi protein_coding retained_intron MGP_WSBEiJ_T0096977.1 MGP_WSBEiJ_G0035658.1 mouse_genomes_project 16 5517629 5517719 - Gm22224 rRNA rRNA MGP_WSBEiJ_T0043544.1 MGP_WSBEiJ_G0022131.1 mouse_genomes_project 16 42118174 42169917 + MGP_WSBEiJ_P0043544 Ccdc191 protein_coding protein_coding MGP_WSBEiJ_T0043545.1 MGP_WSBEiJ_G0022131.1 mouse_genomes_project 16 42118177 42196437 + MGP_WSBEiJ_P0043545 Ccdc191 protein_coding protein_coding MGP_WSBEiJ_T0043546.1 MGP_WSBEiJ_G0022131.1 mouse_genomes_project 16 42118215 42137946 + MGP_WSBEiJ_P0043546 Ccdc191 protein_coding protein_coding MGP_WSBEiJ_T0043547.1 MGP_WSBEiJ_G0022131.1 mouse_genomes_project 16 42118266 42195827 + MGP_WSBEiJ_P0043547 Ccdc191 protein_coding protein_coding MGP_WSBEiJ_T0043548.1 MGP_WSBEiJ_G0022131.1 mouse_genomes_project 16 42169353 42173890 + Ccdc191 protein_coding processed_transcript MGP_WSBEiJ_T0043549.1 MGP_WSBEiJ_G0022131.1 mouse_genomes_project 16 42169474 42196437 + MGP_WSBEiJ_P0043549 Ccdc191 protein_coding protein_coding MGP_WSBEiJ_T0043978.1 MGP_WSBEiJ_G0022269.1 mouse_genomes_project 16 84526586 84550139 - MGP_WSBEiJ_P0043978 Mrpl39 protein_coding protein_coding MGP_WSBEiJ_T0043979.1 MGP_WSBEiJ_G0022269.1 mouse_genomes_project 16 84548564 84549627 - Mrpl39 protein_coding processed_transcript MGP_WSBEiJ_T0012852.1 MGP_WSBEiJ_G0010982.1 mouse_genomes_project 16 19463207 19463602 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0041985.1 MGP_WSBEiJ_G0021764.1 mouse_genomes_project 16 354322 368073 - 1700037C18Rik protein_coding processed_transcript MGP_WSBEiJ_T0041986.1 MGP_WSBEiJ_G0021764.1 mouse_genomes_project 16 354324 367177 - MGP_WSBEiJ_P0041986 1700037C18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0041988.1 MGP_WSBEiJ_G0021764.1 mouse_genomes_project 16 363461 368109 - MGP_WSBEiJ_P0041988 1700037C18Rik protein_coding protein_coding MGP_WSBEiJ_T0041989.1 MGP_WSBEiJ_G0021764.1 mouse_genomes_project 16 365215 367122 - MGP_WSBEiJ_P0041989 1700037C18Rik protein_coding protein_coding MGP_WSBEiJ_T0041990.1 MGP_WSBEiJ_G0021764.1 mouse_genomes_project 16 365675 367071 - MGP_WSBEiJ_P0041990 1700037C18Rik protein_coding protein_coding MGP_WSBEiJ_T0041991.1 MGP_WSBEiJ_G0021764.1 mouse_genomes_project 16 366430 368043 - MGP_WSBEiJ_P0041991 1700037C18Rik protein_coding protein_coding MGP_WSBEiJ_T0042659.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15310358 15375449 + MGP_WSBEiJ_P0042659 Arvcf protein_coding protein_coding MGP_WSBEiJ_T0042660.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15310450 15375445 + MGP_WSBEiJ_P0042660 Arvcf protein_coding protein_coding MGP_WSBEiJ_T0042661.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15310450 15375449 + MGP_WSBEiJ_P0042661 Arvcf protein_coding protein_coding MGP_WSBEiJ_T0042662.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15347308 15375120 + MGP_WSBEiJ_P0042662 Arvcf protein_coding protein_coding MGP_WSBEiJ_T0042663.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15358821 15375449 + MGP_WSBEiJ_P0042663 Arvcf protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042664.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15358822 15374629 + MGP_WSBEiJ_P0042664 Arvcf protein_coding protein_coding MGP_WSBEiJ_T0042665.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15365213 15367379 + Arvcf protein_coding processed_transcript MGP_WSBEiJ_T0042666.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15367462 15369013 + Arvcf protein_coding retained_intron MGP_WSBEiJ_T0042667.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15369504 15371804 + Arvcf protein_coding processed_transcript MGP_WSBEiJ_T0042668.1 MGP_WSBEiJ_G0021915.1 mouse_genomes_project 16 15371821 15372831 + Arvcf protein_coding retained_intron MGP_WSBEiJ_T0042595.1 MGP_WSBEiJ_G0021899.1 mouse_genomes_project 16 14760103 14816796 - MGP_WSBEiJ_P0042595 Gm20518 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003587.1 MGP_WSBEiJ_G0003251.1 mouse_genomes_project 16 23388819 23392678 + Gm4524 antisense antisense MGP_WSBEiJ_T0043390.1 MGP_WSBEiJ_G0022095.1 mouse_genomes_project 16 34844934 34857404 + Golgb1 protein_coding processed_transcript MGP_WSBEiJ_T0043391.1 MGP_WSBEiJ_G0022095.1 mouse_genomes_project 16 34844935 34859206 + MGP_WSBEiJ_P0043391 Golgb1 protein_coding protein_coding MGP_WSBEiJ_T0043392.1 MGP_WSBEiJ_G0022095.1 mouse_genomes_project 16 34844935 34845433 + MGP_WSBEiJ_P0043392 Golgb1 protein_coding protein_coding MGP_WSBEiJ_T0043393.1 MGP_WSBEiJ_G0022095.1 mouse_genomes_project 16 34844962 34902888 + MGP_WSBEiJ_P0043393 Golgb1 protein_coding protein_coding MGP_WSBEiJ_T0043394.1 MGP_WSBEiJ_G0022095.1 mouse_genomes_project 16 34844996 34859208 + MGP_WSBEiJ_P0043394 Golgb1 protein_coding protein_coding MGP_WSBEiJ_T0043395.1 MGP_WSBEiJ_G0022095.1 mouse_genomes_project 16 34855939 34902888 + MGP_WSBEiJ_P0043395 Golgb1 protein_coding protein_coding MGP_WSBEiJ_T0043396.1 MGP_WSBEiJ_G0022095.1 mouse_genomes_project 16 34894259 34898174 + Golgb1 protein_coding retained_intron MGP_WSBEiJ_T0043397.1 MGP_WSBEiJ_G0022095.1 mouse_genomes_project 16 34901202 34901876 + Golgb1 protein_coding retained_intron MGP_WSBEiJ_T0043647.1 MGP_WSBEiJ_G0022153.1 mouse_genomes_project 16 43835543 43907696 + MGP_WSBEiJ_P0043647 Slc9c1 protein_coding protein_coding MGP_WSBEiJ_T0043648.1 MGP_WSBEiJ_G0022153.1 mouse_genomes_project 16 43839889 43907581 + MGP_WSBEiJ_P0043648 Slc9c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043649.1 MGP_WSBEiJ_G0022153.1 mouse_genomes_project 16 43839889 43907581 + MGP_WSBEiJ_P0043649 Slc9c1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003581.1 MGP_WSBEiJ_G0003245.1 mouse_genomes_project 16 11182196 11184383 + Gm15868 antisense antisense MGP_WSBEiJ_T0044053.1 MGP_WSBEiJ_G0022297.1 mouse_genomes_project 16 88808232 88815437 - MGP_WSBEiJ_P0044053 Krtap14 protein_coding protein_coding MGP_WSBEiJ_T0044055.1 MGP_WSBEiJ_G0022297.1 mouse_genomes_project 16 88814903 88815760 - MGP_WSBEiJ_P0044055 Krtap14 protein_coding protein_coding MGP_WSBEiJ_T0042366.1 MGP_WSBEiJ_G0021854.1 mouse_genomes_project 16 11383701 11390701 + MGP_WSBEiJ_P0042366 Gm1758 protein_coding protein_coding MGP_WSBEiJ_T0006746.1 MGP_WSBEiJ_G0005565.1 mouse_genomes_project 16 31090975 31091848 - 1700007L15Rik lincRNA lincRNA MGP_WSBEiJ_T0044450.1 MGP_WSBEiJ_G0022394.1 mouse_genomes_project 16 98241908 98264765 - MGP_WSBEiJ_P0044450 Ripk4 protein_coding protein_coding MGP_WSBEiJ_T0043742.1 MGP_WSBEiJ_G0022182.1 mouse_genomes_project 16 54404419 54470401 - MGP_WSBEiJ_P0043742 Nxpe3 protein_coding protein_coding MGP_WSBEiJ_T0043053.1 MGP_WSBEiJ_G0022012.1 mouse_genomes_project 16 27556896 27558081 + Hes1 protein_coding processed_transcript MGP_WSBEiJ_T0043054.1 MGP_WSBEiJ_G0022012.1 mouse_genomes_project 16 27557852 27560303 + MGP_WSBEiJ_P0043054 Hes1 protein_coding protein_coding MGP_WSBEiJ_T0043055.1 MGP_WSBEiJ_G0022012.1 mouse_genomes_project 16 27558603 27559630 + Hes1 protein_coding retained_intron MGP_WSBEiJ_T0043056.1 MGP_WSBEiJ_G0022012.1 mouse_genomes_project 16 27558844 27559826 + Hes1 protein_coding processed_transcript MGP_WSBEiJ_T0043575.1 MGP_WSBEiJ_G0022138.1 mouse_genomes_project 16 42596614 42636847 + MGP_WSBEiJ_P0043575 Spice1 protein_coding protein_coding MGP_WSBEiJ_T0043576.1 MGP_WSBEiJ_G0022138.1 mouse_genomes_project 16 42596907 42619072 + Spice1 protein_coding processed_transcript MGP_WSBEiJ_T0043577.1 MGP_WSBEiJ_G0022138.1 mouse_genomes_project 16 42597539 42616053 + Spice1 protein_coding processed_transcript MGP_WSBEiJ_T0043578.1 MGP_WSBEiJ_G0022138.1 mouse_genomes_project 16 42615955 42618710 + Spice1 protein_coding retained_intron MGP_WSBEiJ_T0043579.1 MGP_WSBEiJ_G0022138.1 mouse_genomes_project 16 42616025 42619077 + Spice1 protein_coding retained_intron MGP_WSBEiJ_T0043580.1 MGP_WSBEiJ_G0022138.1 mouse_genomes_project 16 42618327 42634033 + Spice1 protein_coding retained_intron MGP_WSBEiJ_T0043581.1 MGP_WSBEiJ_G0022138.1 mouse_genomes_project 16 42618769 42621941 + Spice1 protein_coding processed_transcript MGP_WSBEiJ_T0043582.1 MGP_WSBEiJ_G0022138.1 mouse_genomes_project 16 42633710 42635459 + Spice1 protein_coding retained_intron MGP_WSBEiJ_T0042979.1 MGP_WSBEiJ_G0021987.1 mouse_genomes_project 16 20766983 20771811 + MGP_WSBEiJ_P0042979 Rtp1 protein_coding protein_coding MGP_WSBEiJ_T0043017.1 MGP_WSBEiJ_G0022003.1 mouse_genomes_project 16 24796674 24818054 - MGP_WSBEiJ_P0043017 Uts2b protein_coding protein_coding MGP_WSBEiJ_T0097953.1 MGP_WSBEiJ_G0036616.1 mouse_genomes_project 16 33176450 33176603 - Gm23518 snRNA snRNA MGP_WSBEiJ_T0043142.1 MGP_WSBEiJ_G0022033.1 mouse_genomes_project 16 29690996 29698908 + MGP_WSBEiJ_P0043142 Cep19 protein_coding protein_coding MGP_WSBEiJ_T0043143.1 MGP_WSBEiJ_G0022033.1 mouse_genomes_project 16 29691148 29698890 + MGP_WSBEiJ_P0043143 Cep19 protein_coding protein_coding MGP_WSBEiJ_T0043144.1 MGP_WSBEiJ_G0022033.1 mouse_genomes_project 16 29694936 29698894 + MGP_WSBEiJ_P0043144 Cep19 protein_coding protein_coding MGP_WSBEiJ_T0043182.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30273072 30301675 + Tnk2 protein_coding processed_transcript MGP_WSBEiJ_T0043183.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30273489 30297276 + Tnk2 protein_coding processed_transcript MGP_WSBEiJ_T0043184.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30273841 30316783 + MGP_WSBEiJ_P0043184 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0043185.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30273841 30316783 + MGP_WSBEiJ_P0043185 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0043186.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30273871 30316783 + MGP_WSBEiJ_P0043186 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0043187.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30274024 30316782 + MGP_WSBEiJ_P0043187 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0043188.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30274157 30301688 + Tnk2 protein_coding processed_transcript MGP_WSBEiJ_T0043189.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30288614 30301667 + Tnk2 protein_coding processed_transcript MGP_WSBEiJ_T0043190.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30292310 30301659 + Tnk2 protein_coding processed_transcript MGP_WSBEiJ_T0043191.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30301635 30305051 + Tnk2 protein_coding processed_transcript MGP_WSBEiJ_T0043192.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30306570 30312758 + MGP_WSBEiJ_P0043192 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0043193.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30306572 30316783 + MGP_WSBEiJ_P0043193 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0043194.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30306594 30312972 + MGP_WSBEiJ_P0043194 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0043195.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30306608 30313425 + MGP_WSBEiJ_P0043195 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0043196.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30306611 30312353 + Tnk2 protein_coding retained_intron MGP_WSBEiJ_T0043197.1 MGP_WSBEiJ_G0022047.1 mouse_genomes_project 16 30306615 30313174 + MGP_WSBEiJ_P0043197 Tnk2 protein_coding protein_coding MGP_WSBEiJ_T0097934.1 MGP_WSBEiJ_G0036597.1 mouse_genomes_project 16 4949775 4949879 + Gm26159 snRNA snRNA MGP_WSBEiJ_T0043841.1 MGP_WSBEiJ_G0022211.1 mouse_genomes_project 16 57448206 57451336 - MGP_WSBEiJ_P0043841 Olfr175-ps1 protein_coding protein_coding MGP_WSBEiJ_T0000921.1 MGP_WSBEiJ_G0000858.1 mouse_genomes_project 16 642492 646042 - TEC TEC MGP_WSBEiJ_T0012857.1 MGP_WSBEiJ_G0010987.1 mouse_genomes_project 16 24785959 24786745 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099209.1 MGP_WSBEiJ_G0037872.1 mouse_genomes_project 16 53155380 53155505 + Gm23180 snoRNA snoRNA MGP_WSBEiJ_T0096785.1 MGP_WSBEiJ_G0035466.1 mouse_genomes_project 16 12741942 12743123 + pseudogene pseudogene MGP_WSBEiJ_T0099185.1 MGP_WSBEiJ_G0037848.1 mouse_genomes_project 16 16456739 16456871 + Gm25762 snoRNA snoRNA MGP_WSBEiJ_T0043127.1 MGP_WSBEiJ_G0022030.1 mouse_genomes_project 16 29544575 29588466 - MGP_WSBEiJ_P0043127 Senp5 protein_coding protein_coding MGP_WSBEiJ_T0043128.1 MGP_WSBEiJ_G0022030.1 mouse_genomes_project 16 29545587 29573852 - MGP_WSBEiJ_P0043128 Senp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0043129.1 MGP_WSBEiJ_G0022030.1 mouse_genomes_project 16 29560318 29575028 - MGP_WSBEiJ_P0043129 Senp5 protein_coding protein_coding MGP_WSBEiJ_T0043130.1 MGP_WSBEiJ_G0022030.1 mouse_genomes_project 16 29561471 29588357 - Senp5 protein_coding retained_intron MGP_WSBEiJ_T0096786.1 MGP_WSBEiJ_G0035467.1 mouse_genomes_project 16 14009998 14013936 - pseudogene pseudogene MGP_WSBEiJ_T0043004.1 MGP_WSBEiJ_G0021998.1 mouse_genomes_project 16 23879778 23905028 + MGP_WSBEiJ_P0043004 Cldn16 protein_coding protein_coding MGP_WSBEiJ_T0043005.1 MGP_WSBEiJ_G0021998.1 mouse_genomes_project 16 23879899 23905026 + MGP_WSBEiJ_P0043005 Cldn16 protein_coding protein_coding MGP_WSBEiJ_T0011215.1 MGP_WSBEiJ_G0009372.1 mouse_genomes_project 16 80874197 80874510 - Gm26023 misc_RNA misc_RNA MGP_WSBEiJ_T0044206.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91816468 91862135 - MGP_WSBEiJ_P0044206 Cryzl1 protein_coding protein_coding MGP_WSBEiJ_T0044207.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91816488 91861962 - MGP_WSBEiJ_P0044207 Cryzl1 protein_coding protein_coding MGP_WSBEiJ_T0044208.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91816672 91822677 - Cryzl1 protein_coding processed_transcript MGP_WSBEiJ_T0044209.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91816752 91861783 - MGP_WSBEiJ_P0044209 Cryzl1 protein_coding protein_coding MGP_WSBEiJ_T0044210.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91821845 91840490 - MGP_WSBEiJ_P0044210 Cryzl1 protein_coding protein_coding MGP_WSBEiJ_T0044211.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91821871 91850799 - MGP_WSBEiJ_P0044211 Cryzl1 protein_coding protein_coding MGP_WSBEiJ_T0044212.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91823902 91861861 - MGP_WSBEiJ_P0044212 Cryzl1 protein_coding protein_coding MGP_WSBEiJ_T0044213.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91824155 91830634 - Cryzl1 protein_coding retained_intron MGP_WSBEiJ_T0044214.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91838638 91861760 - Cryzl1 protein_coding retained_intron MGP_WSBEiJ_T0044215.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91845997 91861758 - Cryzl1 protein_coding retained_intron MGP_WSBEiJ_T0044216.1 MGP_WSBEiJ_G0022351.1 mouse_genomes_project 16 91846675 91861768 - Cryzl1 protein_coding processed_transcript MGP_WSBEiJ_T0044116.1 MGP_WSBEiJ_G0022332.1 mouse_genomes_project 16 90894529 90897419 + Eva1c protein_coding processed_transcript MGP_WSBEiJ_T0044117.1 MGP_WSBEiJ_G0022332.1 mouse_genomes_project 16 90894529 90978713 + MGP_WSBEiJ_P0044117 Eva1c protein_coding protein_coding MGP_WSBEiJ_T0044118.1 MGP_WSBEiJ_G0022332.1 mouse_genomes_project 16 90898618 90979127 + MGP_WSBEiJ_P0044118 Eva1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044119.1 MGP_WSBEiJ_G0022332.1 mouse_genomes_project 16 90898677 90978671 + MGP_WSBEiJ_P0044119 Eva1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044120.1 MGP_WSBEiJ_G0022332.1 mouse_genomes_project 16 90898923 90978713 + MGP_WSBEiJ_P0044120 Eva1c protein_coding protein_coding MGP_WSBEiJ_T0044121.1 MGP_WSBEiJ_G0022332.1 mouse_genomes_project 16 90898923 90978713 + MGP_WSBEiJ_P0044121 Eva1c protein_coding protein_coding MGP_WSBEiJ_T0044122.1 MGP_WSBEiJ_G0022332.1 mouse_genomes_project 16 90916268 90961160 + MGP_WSBEiJ_P0044122 Eva1c protein_coding protein_coding MGP_WSBEiJ_T0042866.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17795358 17808481 - MGP_WSBEiJ_P0042866 Clcn2 protein_coding protein_coding MGP_WSBEiJ_T0042867.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17795382 17808478 - Clcn2 protein_coding retained_intron MGP_WSBEiJ_T0042868.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17795392 17808528 - Clcn2 protein_coding retained_intron MGP_WSBEiJ_T0042869.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17795617 17808475 - MGP_WSBEiJ_P0042869 Clcn2 protein_coding protein_coding MGP_WSBEiJ_T0042870.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17797932 17810103 - MGP_WSBEiJ_P0042870 Clcn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042871.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17799567 17801517 - Clcn2 protein_coding retained_intron MGP_WSBEiJ_T0042872.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17800099 17801128 - Clcn2 protein_coding retained_intron MGP_WSBEiJ_T0042873.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17802481 17804356 - Clcn2 protein_coding retained_intron MGP_WSBEiJ_T0042874.1 MGP_WSBEiJ_G0021958.1 mouse_genomes_project 16 17804701 17806059 - Clcn2 protein_coding retained_intron MGP_WSBEiJ_T0042928.1 MGP_WSBEiJ_G0021976.1 mouse_genomes_project 16 20123811 20138358 + MGP_WSBEiJ_P0042928 Dnajb11 protein_coding protein_coding MGP_WSBEiJ_T0042929.1 MGP_WSBEiJ_G0021976.1 mouse_genomes_project 16 20123811 20138281 + MGP_WSBEiJ_P0042929 Dnajb11 protein_coding protein_coding MGP_WSBEiJ_T0042930.1 MGP_WSBEiJ_G0021976.1 mouse_genomes_project 16 20123811 20145560 + MGP_WSBEiJ_P0042930 Dnajb11 protein_coding protein_coding MGP_WSBEiJ_T0042931.1 MGP_WSBEiJ_G0021976.1 mouse_genomes_project 16 20123872 20137998 + Dnajb11 protein_coding processed_transcript MGP_WSBEiJ_T0042932.1 MGP_WSBEiJ_G0021976.1 mouse_genomes_project 16 20135326 20138199 + Dnajb11 protein_coding processed_transcript MGP_WSBEiJ_T0042787.1 MGP_WSBEiJ_G0021947.1 mouse_genomes_project 16 17570391 17581584 + MGP_WSBEiJ_P0042787 Eif2b5 protein_coding protein_coding MGP_WSBEiJ_T0042788.1 MGP_WSBEiJ_G0021947.1 mouse_genomes_project 16 17578035 17580952 + MGP_WSBEiJ_P0042788 Eif2b5 protein_coding protein_coding MGP_WSBEiJ_T0099216.1 MGP_WSBEiJ_G0037879.1 mouse_genomes_project 16 70848127 70848258 + Gm22797 snoRNA snoRNA MGP_WSBEiJ_T0043467.1 MGP_WSBEiJ_G0022116.1 mouse_genomes_project 16 36521412 36550767 + MGP_WSBEiJ_P0043467 Cd80 protein_coding protein_coding MGP_WSBEiJ_T0043444.1 MGP_WSBEiJ_G0022107.1 mouse_genomes_project 16 35954867 36051158 + MGP_WSBEiJ_P0043444 Gpr156 protein_coding protein_coding MGP_WSBEiJ_T0097981.1 MGP_WSBEiJ_G0036644.1 mouse_genomes_project 16 92193643 92193741 + Gm23210 snRNA snRNA MGP_WSBEiJ_T0042817.1 MGP_WSBEiJ_G0021952.1 mouse_genomes_project 16 17682584 17691121 - MGP_WSBEiJ_P0042817 Alg3 protein_coding protein_coding MGP_WSBEiJ_T0042818.1 MGP_WSBEiJ_G0021952.1 mouse_genomes_project 16 17682605 17691084 - MGP_WSBEiJ_P0042818 Alg3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042819.1 MGP_WSBEiJ_G0021952.1 mouse_genomes_project 16 17682606 17691100 - MGP_WSBEiJ_P0042819 Alg3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042820.1 MGP_WSBEiJ_G0021952.1 mouse_genomes_project 16 17689086 17691105 - Alg3 protein_coding processed_transcript MGP_WSBEiJ_T0006722.1 MGP_WSBEiJ_G0005544.1 mouse_genomes_project 16 7592757 7598324 + Gm26822 lincRNA lincRNA MGP_WSBEiJ_T0012835.1 MGP_WSBEiJ_G0010965.1 mouse_genomes_project 16 12274562 12275615 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044151.1 MGP_WSBEiJ_G0022338.1 mouse_genomes_project 16 91327887 91331015 + MGP_WSBEiJ_P0044151 Olig2 protein_coding protein_coding MGP_WSBEiJ_T0041970.1 MGP_WSBEiJ_G0021760.1 mouse_genomes_project 16 303876 315383 + MGP_WSBEiJ_P0041970 Zfp174 protein_coding protein_coding MGP_WSBEiJ_T0042741.1 MGP_WSBEiJ_G0021935.1 mouse_genomes_project 16 16579088 16580760 - MGP_WSBEiJ_P0042741 Olfr168 protein_coding protein_coding MGP_WSBEiJ_T0010007.1 MGP_WSBEiJ_G0008164.1 mouse_genomes_project 16 98378932 98378991 - Mir6964 miRNA miRNA MGP_WSBEiJ_T0042727.1 MGP_WSBEiJ_G0021929.1 mouse_genomes_project 16 15896197 15948678 + MGP_WSBEiJ_P0042727 Hira protein_coding protein_coding MGP_WSBEiJ_T0042728.1 MGP_WSBEiJ_G0021929.1 mouse_genomes_project 16 15896226 15989607 + MGP_WSBEiJ_P0042728 Hira protein_coding protein_coding MGP_WSBEiJ_T0042729.1 MGP_WSBEiJ_G0021929.1 mouse_genomes_project 16 15896430 15931832 + Hira protein_coding retained_intron MGP_WSBEiJ_T0042730.1 MGP_WSBEiJ_G0021929.1 mouse_genomes_project 16 15896430 15955709 + MGP_WSBEiJ_P0042730 Hira protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042731.1 MGP_WSBEiJ_G0021929.1 mouse_genomes_project 16 15896572 15937267 + Hira protein_coding retained_intron MGP_WSBEiJ_T0042732.1 MGP_WSBEiJ_G0021929.1 mouse_genomes_project 16 15943732 15946312 + Hira protein_coding processed_transcript MGP_WSBEiJ_T0042733.1 MGP_WSBEiJ_G0021929.1 mouse_genomes_project 16 15946231 15955764 + Hira protein_coding retained_intron MGP_WSBEiJ_T0042734.1 MGP_WSBEiJ_G0021929.1 mouse_genomes_project 16 15953643 15968114 + Hira protein_coding processed_transcript MGP_WSBEiJ_T0043423.1 MGP_WSBEiJ_G0022100.1 mouse_genomes_project 16 35530590 35560407 - MGP_WSBEiJ_P0043423 Gtf2e1 protein_coding protein_coding MGP_WSBEiJ_T0043424.1 MGP_WSBEiJ_G0022100.1 mouse_genomes_project 16 35553124 35560394 - Gtf2e1 protein_coding retained_intron MGP_WSBEiJ_T0043501.1 MGP_WSBEiJ_G0022124.1 mouse_genomes_project 16 36964360 37099436 + MGP_WSBEiJ_P0043501 Igsf11 protein_coding protein_coding MGP_WSBEiJ_T0043502.1 MGP_WSBEiJ_G0022124.1 mouse_genomes_project 16 36965185 37101265 + MGP_WSBEiJ_P0043502 Igsf11 protein_coding protein_coding MGP_WSBEiJ_T0042605.1 MGP_WSBEiJ_G0021902.1 mouse_genomes_project 16 14823761 14825148 + MGP_WSBEiJ_P0042605 Tssk2 protein_coding protein_coding MGP_WSBEiJ_T0043550.1 MGP_WSBEiJ_G0022132.1 mouse_genomes_project 16 42197152 42211869 - MGP_WSBEiJ_P0043550 Zdhhc23 protein_coding unknown_likely_coding MGP_WSBEiJ_T0043551.1 MGP_WSBEiJ_G0022132.1 mouse_genomes_project 16 42201204 42211221 - MGP_WSBEiJ_P0043551 Zdhhc23 protein_coding protein_coding MGP_WSBEiJ_T0000933.1 MGP_WSBEiJ_G0000870.1 mouse_genomes_project 16 76871440 76874546 + TEC TEC MGP_WSBEiJ_T0000934.1 MGP_WSBEiJ_G0000870.1 mouse_genomes_project 16 76872257 76872619 + TEC pseudogene MGP_WSBEiJ_T0009971.1 MGP_WSBEiJ_G0008128.1 mouse_genomes_project 16 26048841 26048950 - Mir690 miRNA miRNA MGP_WSBEiJ_T0009992.1 MGP_WSBEiJ_G0008149.1 mouse_genomes_project 16 73300660 73300758 + Gm24272 miRNA miRNA MGP_WSBEiJ_T0043838.1 MGP_WSBEiJ_G0022209.1 mouse_genomes_project 16 57419739 57420903 - MGP_WSBEiJ_P0043838 protein_coding protein_coding MGP_WSBEiJ_T0043840.1 MGP_WSBEiJ_G0022209.1 mouse_genomes_project 16 57420409 57424688 - MGP_WSBEiJ_P0043840 protein_coding protein_coding MGP_WSBEiJ_T0042821.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17691945 17701740 + MGP_WSBEiJ_P0042821 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0042822.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17691953 17731839 + MGP_WSBEiJ_P0042822 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0042823.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17691953 17701602 + MGP_WSBEiJ_P0042823 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0042824.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17691962 17731844 + MGP_WSBEiJ_P0042824 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0042825.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17692146 17731839 + MGP_WSBEiJ_P0042825 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0042827.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17713769 17731839 + MGP_WSBEiJ_P0042827 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0042828.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17713786 17728959 + Ece2 protein_coding retained_intron MGP_WSBEiJ_T0042829.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17713786 17732400 + MGP_WSBEiJ_P0042829 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0042830.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17713792 17731839 + MGP_WSBEiJ_P0042830 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0042831.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17715085 17723982 + Ece2 protein_coding retained_intron MGP_WSBEiJ_T0042832.1 MGP_WSBEiJ_G0021953.1 mouse_genomes_project 16 17716804 17732409 + MGP_WSBEiJ_P0042832 Ece2 protein_coding protein_coding MGP_WSBEiJ_T0097976.1 MGP_WSBEiJ_G0036639.1 mouse_genomes_project 16 80311600 80311699 + Gm24773 snRNA snRNA MGP_WSBEiJ_T0042386.1 MGP_WSBEiJ_G0021864.1 mouse_genomes_project 16 13167739 13172756 + Yars2 protein_coding retained_intron MGP_WSBEiJ_T0042387.1 MGP_WSBEiJ_G0021864.1 mouse_genomes_project 16 13167746 13174865 + MGP_WSBEiJ_P0042387 Yars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042388.1 MGP_WSBEiJ_G0021864.1 mouse_genomes_project 16 13167749 13174867 + MGP_WSBEiJ_P0042388 Yars2 protein_coding protein_coding MGP_WSBEiJ_T0042389.1 MGP_WSBEiJ_G0021864.1 mouse_genomes_project 16 13168318 13172474 + Yars2 protein_coding processed_transcript MGP_WSBEiJ_T0042390.1 MGP_WSBEiJ_G0021864.1 mouse_genomes_project 16 13169365 13172613 + MGP_WSBEiJ_P0042390 Yars2 protein_coding protein_coding MGP_WSBEiJ_T0044451.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98290944 98351540 - MGP_WSBEiJ_P0044451 Prdm15 protein_coding protein_coding MGP_WSBEiJ_T0044452.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98290997 98352163 - MGP_WSBEiJ_P0044452 Prdm15 protein_coding protein_coding MGP_WSBEiJ_T0044453.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98291354 98352096 - MGP_WSBEiJ_P0044453 Prdm15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044454.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98291809 98299780 - Prdm15 protein_coding retained_intron MGP_WSBEiJ_T0044455.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98293657 98340274 - MGP_WSBEiJ_P0044455 Prdm15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044456.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98293995 98303810 - Prdm15 protein_coding processed_transcript MGP_WSBEiJ_T0044457.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98295200 98297397 - Prdm15 protein_coding retained_intron MGP_WSBEiJ_T0044458.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98319129 98330054 - Prdm15 protein_coding retained_intron MGP_WSBEiJ_T0044459.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98335680 98340282 - Prdm15 protein_coding retained_intron MGP_WSBEiJ_T0044460.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98336098 98349195 - MGP_WSBEiJ_P0044460 Prdm15 protein_coding protein_coding MGP_WSBEiJ_T0044461.1 MGP_WSBEiJ_G0022395.1 mouse_genomes_project 16 98337995 98351540 - MGP_WSBEiJ_P0044461 Prdm15 protein_coding protein_coding MGP_WSBEiJ_T0012822.1 MGP_WSBEiJ_G0010952.1 mouse_genomes_project 16 1028444 1028832 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097939.1 MGP_WSBEiJ_G0036602.1 mouse_genomes_project 16 13892872 13892967 - Gm22558 snRNA snRNA MGP_WSBEiJ_T0043018.1 MGP_WSBEiJ_G0022004.1 mouse_genomes_project 16 24836603 24892921 + MGP_WSBEiJ_P0043018 Ccdc50 protein_coding protein_coding MGP_WSBEiJ_T0043019.1 MGP_WSBEiJ_G0022004.1 mouse_genomes_project 16 24836714 24887094 + MGP_WSBEiJ_P0043019 Ccdc50 protein_coding protein_coding MGP_WSBEiJ_T0043020.1 MGP_WSBEiJ_G0022004.1 mouse_genomes_project 16 24836714 24880386 + MGP_WSBEiJ_P0043020 Ccdc50 protein_coding protein_coding MGP_WSBEiJ_T0043021.1 MGP_WSBEiJ_G0022004.1 mouse_genomes_project 16 24837670 24879066 + MGP_WSBEiJ_P0043021 Ccdc50 protein_coding protein_coding MGP_WSBEiJ_T0043022.1 MGP_WSBEiJ_G0022004.1 mouse_genomes_project 16 24837702 24838826 + Ccdc50 protein_coding processed_transcript MGP_WSBEiJ_T0043694.1 MGP_WSBEiJ_G0022168.1 mouse_genomes_project 16 47161776 47163801 + MGP_WSBEiJ_P0043694 Retnlb protein_coding protein_coding MGP_WSBEiJ_T0010006.1 MGP_WSBEiJ_G0008163.1 mouse_genomes_project 16 96438213 96438337 - Gm27833 miRNA miRNA MGP_WSBEiJ_T0097299.1 MGP_WSBEiJ_G0035975.1 mouse_genomes_project 16 92248341 92250254 + Gm16310 sense_intronic sense_intronic MGP_WSBEiJ_T0043653.1 MGP_WSBEiJ_G0022156.1 mouse_genomes_project 16 43957368 43997185 - MGP_WSBEiJ_P0043653 Tmprss7 protein_coding protein_coding MGP_WSBEiJ_T0043654.1 MGP_WSBEiJ_G0022156.1 mouse_genomes_project 16 43957370 43988770 - Tmprss7 protein_coding processed_transcript MGP_WSBEiJ_T0043655.1 MGP_WSBEiJ_G0022156.1 mouse_genomes_project 16 43957394 43993142 - Tmprss7 protein_coding processed_transcript MGP_WSBEiJ_T0043656.1 MGP_WSBEiJ_G0022156.1 mouse_genomes_project 16 43986786 43989887 - Tmprss7 protein_coding processed_transcript MGP_WSBEiJ_T0043657.1 MGP_WSBEiJ_G0022156.1 mouse_genomes_project 16 43986900 43989892 - Tmprss7 protein_coding retained_intron MGP_WSBEiJ_T0043117.1 MGP_WSBEiJ_G0022026.1 mouse_genomes_project 16 29456612 29476837 + MGP_WSBEiJ_P0043117 Mfi2 protein_coding protein_coding MGP_WSBEiJ_T0043562.1 MGP_WSBEiJ_G0022135.1 mouse_genomes_project 16 42372837 42395093 + MGP_WSBEiJ_P0043562 Naa50 protein_coding protein_coding MGP_WSBEiJ_T0043563.1 MGP_WSBEiJ_G0022135.1 mouse_genomes_project 16 42372860 42395985 + MGP_WSBEiJ_P0043563 Naa50 protein_coding protein_coding MGP_WSBEiJ_T0043564.1 MGP_WSBEiJ_G0022135.1 mouse_genomes_project 16 42372893 42395091 + MGP_WSBEiJ_P0043564 Naa50 protein_coding protein_coding MGP_WSBEiJ_T0043565.1 MGP_WSBEiJ_G0022135.1 mouse_genomes_project 16 42372899 42393785 + MGP_WSBEiJ_P0043565 Naa50 protein_coding protein_coding MGP_WSBEiJ_T0097969.1 MGP_WSBEiJ_G0036632.1 mouse_genomes_project 16 54160199 54160306 - Gm23003 snRNA snRNA MGP_WSBEiJ_T0009979.1 MGP_WSBEiJ_G0008136.1 mouse_genomes_project 16 40497022 40497130 - Mir6540 miRNA miRNA MGP_WSBEiJ_T0012860.1 MGP_WSBEiJ_G0010990.1 mouse_genomes_project 16 29552979 29553424 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0043828.1 MGP_WSBEiJ_G0022204.1 mouse_genomes_project 16 57225877 57229170 - MGP_WSBEiJ_P0043828 Gm813 protein_coding protein_coding MGP_WSBEiJ_T0044217.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862440 92007189 + MGP_WSBEiJ_P0044217 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044218.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862512 92008630 + MGP_WSBEiJ_P0044218 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044219.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862512 92063195 + MGP_WSBEiJ_P0044219 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044220.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862512 92056643 + MGP_WSBEiJ_P0044220 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044221.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862529 91966650 + MGP_WSBEiJ_P0044221 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044222.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862530 92008634 + MGP_WSBEiJ_P0044222 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044223.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862532 92008632 + MGP_WSBEiJ_P0044223 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044224.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862625 91917121 + Itsn1 protein_coding retained_intron MGP_WSBEiJ_T0044225.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862730 91928605 + Itsn1 protein_coding retained_intron MGP_WSBEiJ_T0044226.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91862751 92007476 + MGP_WSBEiJ_P0044226 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044227.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91916903 91953237 + MGP_WSBEiJ_P0044227 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044228.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91918861 91962613 + Itsn1 protein_coding processed_transcript MGP_WSBEiJ_T0044229.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91939231 91951520 + Itsn1 protein_coding processed_transcript MGP_WSBEiJ_T0044230.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91939245 91946901 + Itsn1 protein_coding retained_intron MGP_WSBEiJ_T0044231.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91951428 91962200 + Itsn1 protein_coding processed_transcript MGP_WSBEiJ_T0044232.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91961839 91962576 + Itsn1 protein_coding retained_intron MGP_WSBEiJ_T0044233.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91973965 91985581 + Itsn1 protein_coding retained_intron MGP_WSBEiJ_T0044234.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91974054 91988579 + MGP_WSBEiJ_P0044234 Itsn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044235.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91976894 91988579 + MGP_WSBEiJ_P0044235 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044236.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91989129 91998654 + MGP_WSBEiJ_P0044236 Itsn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044237.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 91997348 92008326 + Itsn1 protein_coding retained_intron MGP_WSBEiJ_T0044238.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 92015608 92032331 + Itsn1 protein_coding processed_transcript MGP_WSBEiJ_T0044239.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 92025880 92050012 + MGP_WSBEiJ_P0044239 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044240.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 92037917 92050035 + MGP_WSBEiJ_P0044240 Itsn1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044241.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 92037919 92050012 + MGP_WSBEiJ_P0044241 Itsn1 protein_coding protein_coding MGP_WSBEiJ_T0044242.1 MGP_WSBEiJ_G0022352.1 mouse_genomes_project 16 92054613 92057815 + Itsn1 protein_coding processed_transcript MGP_WSBEiJ_T0009996.1 MGP_WSBEiJ_G0008153.1 mouse_genomes_project 16 77086610 77086704 + Mirlet7c-1 miRNA miRNA MGP_WSBEiJ_T0006731.1 MGP_WSBEiJ_G0005552.1 mouse_genomes_project 16 14158513 14163742 - Gm26635 lincRNA lincRNA MGP_WSBEiJ_T0043678.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44702054 44814679 - MGP_WSBEiJ_P0043678 Nectin3 protein_coding protein_coding MGP_WSBEiJ_T0043679.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44709170 44725269 - MGP_WSBEiJ_P0043679 Nectin3 protein_coding protein_coding MGP_WSBEiJ_T0043680.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44709217 44725325 - MGP_WSBEiJ_P0043680 Nectin3 protein_coding protein_coding MGP_WSBEiJ_T0043681.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44709301 44766636 - MGP_WSBEiJ_P0043681 Nectin3 protein_coding protein_coding MGP_WSBEiJ_T0043682.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44709755 44754492 - MGP_WSBEiJ_P0043682 Nectin3 protein_coding protein_coding MGP_WSBEiJ_T0043683.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44752415 44814564 - MGP_WSBEiJ_P0043683 Nectin3 protein_coding protein_coding MGP_WSBEiJ_T0043684.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44752827 44755070 - Nectin3 protein_coding retained_intron MGP_WSBEiJ_T0043685.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44765294 44814679 - MGP_WSBEiJ_P0043685 Nectin3 protein_coding protein_coding MGP_WSBEiJ_T0043686.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44775509 44814484 - MGP_WSBEiJ_P0043686 Nectin3 protein_coding protein_coding MGP_WSBEiJ_T0043687.1 MGP_WSBEiJ_G0022162.1 mouse_genomes_project 16 44779690 44816243 - Nectin3 protein_coding processed_transcript MGP_WSBEiJ_T0043319.1 MGP_WSBEiJ_G0022076.1 mouse_genomes_project 16 33638904 33681297 - MGP_WSBEiJ_P0043319 Parp14 protein_coding protein_coding MGP_WSBEiJ_T0043320.1 MGP_WSBEiJ_G0022076.1 mouse_genomes_project 16 33665181 33681150 - Parp14 protein_coding retained_intron MGP_WSBEiJ_T0043321.1 MGP_WSBEiJ_G0022076.1 mouse_genomes_project 16 33674963 33681150 - Parp14 protein_coding retained_intron MGP_WSBEiJ_T0044304.1 MGP_WSBEiJ_G0022370.1 mouse_genomes_project 16 94634100 94643538 + MGP_WSBEiJ_P0044304 Ripply3 protein_coding protein_coding MGP_WSBEiJ_T0043719.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48561763 48809064 - MGP_WSBEiJ_P0043719 Bbx protein_coding protein_coding MGP_WSBEiJ_T0043720.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48565701 48809014 - MGP_WSBEiJ_P0043720 Bbx protein_coding protein_coding MGP_WSBEiJ_T0043721.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48566538 48809063 - MGP_WSBEiJ_P0043721 Bbx protein_coding protein_coding MGP_WSBEiJ_T0043722.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48567071 48706654 - MGP_WSBEiJ_P0043722 Bbx protein_coding protein_coding MGP_WSBEiJ_T0043723.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48580393 48809048 - MGP_WSBEiJ_P0043723 Bbx protein_coding protein_coding MGP_WSBEiJ_T0043724.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48588440 48809063 - MGP_WSBEiJ_P0043724 Bbx protein_coding protein_coding MGP_WSBEiJ_T0043725.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48594728 48806576 - Bbx protein_coding processed_transcript MGP_WSBEiJ_T0043726.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48802624 48808983 - Bbx protein_coding retained_intron MGP_WSBEiJ_T0043727.1 MGP_WSBEiJ_G0022176.1 mouse_genomes_project 16 48804044 48809021 - Bbx protein_coding processed_transcript MGP_WSBEiJ_T0097948.1 MGP_WSBEiJ_G0036611.1 mouse_genomes_project 16 20763498 20763569 + Gm23066 snRNA snRNA MGP_WSBEiJ_T0096981.1 MGP_WSBEiJ_G0035662.1 mouse_genomes_project 16 30685125 30685244 + n-R5s33 rRNA rRNA MGP_WSBEiJ_T0043123.1 MGP_WSBEiJ_G0022029.1 mouse_genomes_project 16 29529589 29540537 + MGP_WSBEiJ_P0043123 Ncbp2 protein_coding protein_coding MGP_WSBEiJ_T0043124.1 MGP_WSBEiJ_G0022029.1 mouse_genomes_project 16 29529677 29539213 + Ncbp2 protein_coding retained_intron MGP_WSBEiJ_T0043125.1 MGP_WSBEiJ_G0022029.1 mouse_genomes_project 16 29529682 29543852 + Ncbp2 protein_coding processed_transcript MGP_WSBEiJ_T0043126.1 MGP_WSBEiJ_G0022029.1 mouse_genomes_project 16 29529689 29539241 + MGP_WSBEiJ_P0043126 Ncbp2 protein_coding protein_coding MGP_WSBEiJ_T0042048.1 MGP_WSBEiJ_G0021775.1 mouse_genomes_project 16 1108845 1109370 - protein_coding retained_intron MGP_WSBEiJ_T0042049.1 MGP_WSBEiJ_G0021775.1 mouse_genomes_project 16 1108845 1117249 - MGP_WSBEiJ_P0042049 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042050.1 MGP_WSBEiJ_G0021775.1 mouse_genomes_project 16 1108845 1117301 - MGP_WSBEiJ_P0042050 protein_coding protein_coding MGP_WSBEiJ_T0042051.1 MGP_WSBEiJ_G0021775.1 mouse_genomes_project 16 1108983 1110536 - protein_coding retained_intron MGP_WSBEiJ_T0012849.1 MGP_WSBEiJ_G0010979.1 mouse_genomes_project 16 16776250 16776917 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006750.1 MGP_WSBEiJ_G0005569.1 mouse_genomes_project 16 41567455 41585221 - Gm9968 lincRNA lincRNA MGP_WSBEiJ_T0042531.1 MGP_WSBEiJ_G0021889.1 mouse_genomes_project 16 14441037 14444192 - MGP_WSBEiJ_P0042531 Thap7 protein_coding protein_coding MGP_WSBEiJ_T0042532.1 MGP_WSBEiJ_G0021889.1 mouse_genomes_project 16 14441241 14444168 - Thap7 protein_coding retained_intron MGP_WSBEiJ_T0042533.1 MGP_WSBEiJ_G0021889.1 mouse_genomes_project 16 14441305 14444108 - Thap7 protein_coding retained_intron MGP_WSBEiJ_T0042534.1 MGP_WSBEiJ_G0021889.1 mouse_genomes_project 16 14441399 14443737 - Thap7 protein_coding retained_intron MGP_WSBEiJ_T0042535.1 MGP_WSBEiJ_G0021889.1 mouse_genomes_project 16 14441556 14442204 - Thap7 protein_coding retained_intron MGP_WSBEiJ_T0042536.1 MGP_WSBEiJ_G0021889.1 mouse_genomes_project 16 14441637 14444111 - MGP_WSBEiJ_P0042536 Thap7 protein_coding protein_coding MGP_WSBEiJ_T0042537.1 MGP_WSBEiJ_G0021889.1 mouse_genomes_project 16 14442058 14443712 - Thap7 protein_coding retained_intron MGP_WSBEiJ_T0044407.1 MGP_WSBEiJ_G0022382.1 mouse_genomes_project 16 96549717 96559038 + Wrb protein_coding retained_intron MGP_WSBEiJ_T0044408.1 MGP_WSBEiJ_G0022382.1 mouse_genomes_project 16 96549717 96551066 + Wrb protein_coding processed_transcript MGP_WSBEiJ_T0044409.1 MGP_WSBEiJ_G0022382.1 mouse_genomes_project 16 96549717 96562132 + MGP_WSBEiJ_P0044409 Wrb protein_coding protein_coding MGP_WSBEiJ_T0044410.1 MGP_WSBEiJ_G0022382.1 mouse_genomes_project 16 96549721 96556098 + MGP_WSBEiJ_P0044410 Wrb protein_coding protein_coding MGP_WSBEiJ_T0000018.1 MGP_WSBEiJ_G0000013.1 mouse_genomes_project 16 16233638 16233952 - MGP_WSBEiJ_P0000018 Iglc4 IG_C_gene IG_C_gene MGP_WSBEiJ_T0012877.1 MGP_WSBEiJ_G0011007.1 mouse_genomes_project 16 45409763 45412444 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003574.1 MGP_WSBEiJ_G0003239.1 mouse_genomes_project 16 1233609 1234549 + Gm15859 antisense antisense MGP_WSBEiJ_T0043974.1 MGP_WSBEiJ_G0022267.1 mouse_genomes_project 16 78495817 78633526 - MGP_WSBEiJ_P0043974 Tmprss15 protein_coding protein_coding MGP_WSBEiJ_T0043975.1 MGP_WSBEiJ_G0022267.1 mouse_genomes_project 16 78496273 78633531 - MGP_WSBEiJ_P0043975 Tmprss15 protein_coding protein_coding MGP_WSBEiJ_T0042435.1 MGP_WSBEiJ_G0021871.1 mouse_genomes_project 16 13768780 13802508 + MGP_WSBEiJ_P0042435 Ppm1f protein_coding protein_coding MGP_WSBEiJ_T0042436.1 MGP_WSBEiJ_G0021871.1 mouse_genomes_project 16 13768885 13790340 + Ppm1f protein_coding processed_transcript MGP_WSBEiJ_T0099222.1 MGP_WSBEiJ_G0037885.1 mouse_genomes_project 16 79721049 79721165 + Gm23083 snoRNA snoRNA MGP_WSBEiJ_T0099204.1 MGP_WSBEiJ_G0037867.1 mouse_genomes_project 16 44539212 44539344 + Gm26297 snoRNA snoRNA MGP_WSBEiJ_T0044440.1 MGP_WSBEiJ_G0022390.1 mouse_genomes_project 16 97836827 97922363 + MGP_WSBEiJ_P0044440 Bace2 protein_coding protein_coding MGP_WSBEiJ_T0003590.1 MGP_WSBEiJ_G0003253.1 mouse_genomes_project 16 29699708 29704542 + Gm15729 antisense antisense MGP_WSBEiJ_T0000941.1 MGP_WSBEiJ_G0000877.1 mouse_genomes_project 16 77045779 77048897 + TEC TEC MGP_WSBEiJ_T0043257.1 MGP_WSBEiJ_G0022060.1 mouse_genomes_project 16 31241578 31393629 + MGP_WSBEiJ_P0043257 Slc12a8 protein_coding protein_coding MGP_WSBEiJ_T0043258.1 MGP_WSBEiJ_G0022060.1 mouse_genomes_project 16 31321354 31393623 + MGP_WSBEiJ_P0043258 Slc12a8 protein_coding protein_coding MGP_WSBEiJ_T0042063.1 MGP_WSBEiJ_G0021778.1 mouse_genomes_project 16 1132292 1190100 + Dnaja3 protein_coding processed_transcript MGP_WSBEiJ_T0042067.1 MGP_WSBEiJ_G0021778.1 mouse_genomes_project 16 1183470 1211458 + MGP_WSBEiJ_P0042067 Dnaja3 protein_coding protein_coding MGP_WSBEiJ_T0042068.1 MGP_WSBEiJ_G0021778.1 mouse_genomes_project 16 1183496 1211458 + MGP_WSBEiJ_P0042068 Dnaja3 protein_coding protein_coding MGP_WSBEiJ_T0042069.1 MGP_WSBEiJ_G0021778.1 mouse_genomes_project 16 1183514 1197026 + Dnaja3 protein_coding retained_intron MGP_WSBEiJ_T0042512.1 MGP_WSBEiJ_G0021886.1 mouse_genomes_project 16 14364394 14398449 + MGP_WSBEiJ_P0042512 Crkl protein_coding protein_coding MGP_WSBEiJ_T0043552.1 MGP_WSBEiJ_G0022133.1 mouse_genomes_project 16 42212477 42246019 - MGP_WSBEiJ_P0043552 Gramd1c protein_coding protein_coding MGP_WSBEiJ_T0043553.1 MGP_WSBEiJ_G0022133.1 mouse_genomes_project 16 42212482 42261508 - MGP_WSBEiJ_P0043553 Gramd1c protein_coding protein_coding MGP_WSBEiJ_T0043554.1 MGP_WSBEiJ_G0022133.1 mouse_genomes_project 16 42212482 42249416 - MGP_WSBEiJ_P0043554 Gramd1c protein_coding protein_coding MGP_WSBEiJ_T0043555.1 MGP_WSBEiJ_G0022133.1 mouse_genomes_project 16 42219050 42273738 - MGP_WSBEiJ_P0043555 Gramd1c protein_coding unknown_likely_coding MGP_WSBEiJ_T0006761.1 MGP_WSBEiJ_G0005576.1 mouse_genomes_project 16 49178886 49180625 + lincRNA lincRNA MGP_WSBEiJ_T0006762.1 MGP_WSBEiJ_G0005576.1 mouse_genomes_project 16 49178955 49180599 + lincRNA lincRNA MGP_WSBEiJ_T0042437.1 MGP_WSBEiJ_G0021872.1 mouse_genomes_project 16 13869593 13933760 + MGP_WSBEiJ_P0042437 Mapk1 protein_coding protein_coding MGP_WSBEiJ_T0042438.1 MGP_WSBEiJ_G0021872.1 mouse_genomes_project 16 13869593 13931056 + MGP_WSBEiJ_P0042438 Mapk1 protein_coding protein_coding MGP_WSBEiJ_T0042439.1 MGP_WSBEiJ_G0021872.1 mouse_genomes_project 16 13869778 13925199 + MGP_WSBEiJ_P0042439 Mapk1 protein_coding protein_coding MGP_WSBEiJ_T0042440.1 MGP_WSBEiJ_G0021872.1 mouse_genomes_project 16 13904605 13910248 + Mapk1 protein_coding retained_intron MGP_WSBEiJ_T0042441.1 MGP_WSBEiJ_G0021872.1 mouse_genomes_project 16 13912218 13913387 + Mapk1 protein_coding retained_intron MGP_WSBEiJ_T0042442.1 MGP_WSBEiJ_G0021872.1 mouse_genomes_project 16 13912558 13930170 + MGP_WSBEiJ_P0042442 Mapk1 protein_coding protein_coding MGP_WSBEiJ_T0042443.1 MGP_WSBEiJ_G0021872.1 mouse_genomes_project 16 13921496 13924864 + Mapk1 protein_coding processed_transcript MGP_WSBEiJ_T0042444.1 MGP_WSBEiJ_G0021872.1 mouse_genomes_project 16 13921707 13930517 + Mapk1 protein_coding processed_transcript MGP_WSBEiJ_T0043239.1 MGP_WSBEiJ_G0022054.1 mouse_genomes_project 16 30699169 30747721 - MGP_WSBEiJ_P0043239 Iqcg protein_coding protein_coding MGP_WSBEiJ_T0043240.1 MGP_WSBEiJ_G0022054.1 mouse_genomes_project 16 30700752 30708101 - Iqcg protein_coding processed_transcript MGP_WSBEiJ_T0043241.1 MGP_WSBEiJ_G0022054.1 mouse_genomes_project 16 30728412 30747749 - MGP_WSBEiJ_P0043241 Iqcg protein_coding protein_coding MGP_WSBEiJ_T0043242.1 MGP_WSBEiJ_G0022054.1 mouse_genomes_project 16 30738339 30747716 - Iqcg protein_coding retained_intron MGP_WSBEiJ_T0043300.1 MGP_WSBEiJ_G0022069.1 mouse_genomes_project 16 32793767 32883155 + MGP_WSBEiJ_P0043300 Hacd2 protein_coding protein_coding MGP_WSBEiJ_T0044081.1 MGP_WSBEiJ_G0022321.1 mouse_genomes_project 16 89411682 89412420 - MGP_WSBEiJ_P0044081 Krtap6-2 protein_coding protein_coding MGP_WSBEiJ_T0009956.1 MGP_WSBEiJ_G0008113.1 mouse_genomes_project 16 14016491 14016573 - Mir130b miRNA miRNA MGP_WSBEiJ_T0044057.1 MGP_WSBEiJ_G0022299.1 mouse_genomes_project 16 88860528 88861021 - MGP_WSBEiJ_P0044057 Krtap19-1 protein_coding protein_coding MGP_WSBEiJ_T0044062.1 MGP_WSBEiJ_G0022304.1 mouse_genomes_project 16 88920476 88920644 - MGP_WSBEiJ_P0044062 Krtap19-9a protein_coding protein_coding MGP_WSBEiJ_T0041969.1 MGP_WSBEiJ_G0021759.1 mouse_genomes_project 16 295578 296517 + MGP_WSBEiJ_P0041969 Olfr15 protein_coding protein_coding MGP_WSBEiJ_T0043944.1 MGP_WSBEiJ_G0022255.1 mouse_genomes_project 16 74996130 75005259 + MGP_WSBEiJ_P0043944 Rbm11 protein_coding protein_coding MGP_WSBEiJ_T0043945.1 MGP_WSBEiJ_G0022255.1 mouse_genomes_project 16 74996130 75006393 + MGP_WSBEiJ_P0043945 Rbm11 protein_coding protein_coding MGP_WSBEiJ_T0043946.1 MGP_WSBEiJ_G0022255.1 mouse_genomes_project 16 74996177 75006389 + MGP_WSBEiJ_P0043946 Rbm11 protein_coding protein_coding MGP_WSBEiJ_T0043449.1 MGP_WSBEiJ_G0022109.1 mouse_genomes_project 16 36302189 36353058 - MGP_WSBEiJ_P0043449 Nr1i2 protein_coding protein_coding MGP_WSBEiJ_T0009987.1 MGP_WSBEiJ_G0008144.1 mouse_genomes_project 16 54658609 54658713 + Gm24047 miRNA miRNA MGP_WSBEiJ_T0006763.1 MGP_WSBEiJ_G0005577.1 mouse_genomes_project 16 55796819 55804765 + Gm16892 lincRNA lincRNA MGP_WSBEiJ_T0044147.1 MGP_WSBEiJ_G0022336.1 mouse_genomes_project 16 91141312 91156529 - MGP_WSBEiJ_P0044147 4932438H23Rik protein_coding protein_coding MGP_WSBEiJ_T0044148.1 MGP_WSBEiJ_G0022336.1 mouse_genomes_project 16 91141312 91156529 - MGP_WSBEiJ_P0044148 4932438H23Rik protein_coding protein_coding MGP_WSBEiJ_T0044149.1 MGP_WSBEiJ_G0022336.1 mouse_genomes_project 16 91143218 91185201 - MGP_WSBEiJ_P0044149 4932438H23Rik protein_coding protein_coding MGP_WSBEiJ_T0042538.1 MGP_WSBEiJ_G0021890.1 mouse_genomes_project 16 14458732 14475845 - MGP_WSBEiJ_P0042538 Lrrc74b protein_coding protein_coding MGP_WSBEiJ_T0042539.1 MGP_WSBEiJ_G0021890.1 mouse_genomes_project 16 14458732 14475845 - MGP_WSBEiJ_P0042539 Lrrc74b protein_coding protein_coding MGP_WSBEiJ_T0042540.1 MGP_WSBEiJ_G0021890.1 mouse_genomes_project 16 14459697 14468670 - Lrrc74b protein_coding processed_transcript MGP_WSBEiJ_T0042541.1 MGP_WSBEiJ_G0021890.1 mouse_genomes_project 16 14463046 14475842 - MGP_WSBEiJ_P0042541 Lrrc74b protein_coding protein_coding MGP_WSBEiJ_T0044082.1 MGP_WSBEiJ_G0022322.1 mouse_genomes_project 16 89476488 89477067 - MGP_WSBEiJ_P0044082 Krtap8-1 protein_coding protein_coding MGP_WSBEiJ_T0012866.1 MGP_WSBEiJ_G0010996.1 mouse_genomes_project 16 36547065 36548241 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016937.1 MGP_WSBEiJ_G0014752.1 mouse_genomes_project 16 93568271 93583816 - 1810053B23Rik processed_transcript lincRNA MGP_WSBEiJ_T0016938.1 MGP_WSBEiJ_G0014752.1 mouse_genomes_project 16 93568714 93578190 - 1810053B23Rik processed_transcript lincRNA MGP_WSBEiJ_T0016939.1 MGP_WSBEiJ_G0014752.1 mouse_genomes_project 16 93569265 93579072 - 1810053B23Rik processed_transcript lincRNA MGP_WSBEiJ_T0016940.1 MGP_WSBEiJ_G0014752.1 mouse_genomes_project 16 93569734 93579082 - 1810053B23Rik processed_transcript lincRNA MGP_WSBEiJ_T0016941.1 MGP_WSBEiJ_G0014752.1 mouse_genomes_project 16 93571046 93584647 - 1810053B23Rik processed_transcript retained_intron MGP_WSBEiJ_T0016942.1 MGP_WSBEiJ_G0014752.1 mouse_genomes_project 16 93571786 93584615 - 1810053B23Rik processed_transcript retained_intron MGP_WSBEiJ_T0042127.1 MGP_WSBEiJ_G0021796.1 mouse_genomes_project 16 1749221 1761117 - MGP_WSBEiJ_P0042127 AU021092 protein_coding protein_coding MGP_WSBEiJ_T0016933.1 MGP_WSBEiJ_G0014748.1 mouse_genomes_project 16 91572749 91579165 + A930006K02Rik processed_transcript processed_transcript MGP_WSBEiJ_T0012875.1 MGP_WSBEiJ_G0011005.1 mouse_genomes_project 16 43733668 43736640 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100592.1 MGP_WSBEiJ_G0039050.1 mouse_genomes_project 16 81412 82348 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012882.1 MGP_WSBEiJ_G0011012.1 mouse_genomes_project 16 59349115 59350051 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003585.1 MGP_WSBEiJ_G0003249.1 mouse_genomes_project 16 15566125 15586957 + 4930588K23Rik antisense antisense MGP_WSBEiJ_T0042649.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15258704 15285059 - MGP_WSBEiJ_P0042649 Tango2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042650.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15258706 15306273 - MGP_WSBEiJ_P0042650 Tango2 protein_coding protein_coding MGP_WSBEiJ_T0042651.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15259102 15262026 - Tango2 protein_coding retained_intron MGP_WSBEiJ_T0042652.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15266697 15270164 - Tango2 protein_coding processed_transcript MGP_WSBEiJ_T0042653.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15269490 15271650 - Tango2 protein_coding retained_intron MGP_WSBEiJ_T0042654.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15269598 15310280 - MGP_WSBEiJ_P0042654 Tango2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0042655.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15269606 15306248 - MGP_WSBEiJ_P0042655 Tango2 protein_coding protein_coding MGP_WSBEiJ_T0042656.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15271040 15285060 - Tango2 protein_coding retained_intron MGP_WSBEiJ_T0042657.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15276987 15285060 - Tango2 protein_coding retained_intron MGP_WSBEiJ_T0042658.1 MGP_WSBEiJ_G0021914.1 mouse_genomes_project 16 15281571 15310260 - Tango2 protein_coding retained_intron MGP_WSBEiJ_T0016895.1 MGP_WSBEiJ_G0014733.1 mouse_genomes_project 16 15384831 15391160 + Gm15764 processed_transcript antisense MGP_WSBEiJ_T0016896.1 MGP_WSBEiJ_G0014733.1 mouse_genomes_project 16 15385034 15390529 + Gm15764 processed_transcript retained_intron MGP_WSBEiJ_T0042367.1 MGP_WSBEiJ_G0021855.1 mouse_genomes_project 16 11444554 11499388 + MGP_WSBEiJ_P0042367 A630010A05Rik protein_coding protein_coding MGP_WSBEiJ_T0042368.1 MGP_WSBEiJ_G0021855.1 mouse_genomes_project 16 11457949 11499410 + MGP_WSBEiJ_P0042368 A630010A05Rik protein_coding protein_coding MGP_WSBEiJ_T0042369.1 MGP_WSBEiJ_G0021855.1 mouse_genomes_project 16 11467142 11499396 + MGP_WSBEiJ_P0042369 A630010A05Rik protein_coding protein_coding MGP_WSBEiJ_T0044165.1 MGP_WSBEiJ_G0022343.1 mouse_genomes_project 16 91597179 91619862 + MGP_WSBEiJ_P0044165 Ifnar1 protein_coding protein_coding MGP_WSBEiJ_T0044166.1 MGP_WSBEiJ_G0022343.1 mouse_genomes_project 16 91597190 91619858 + MGP_WSBEiJ_P0044166 Ifnar1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044167.1 MGP_WSBEiJ_G0022343.1 mouse_genomes_project 16 91597205 91619862 + MGP_WSBEiJ_P0044167 Ifnar1 protein_coding protein_coding MGP_WSBEiJ_T0044168.1 MGP_WSBEiJ_G0022343.1 mouse_genomes_project 16 91597218 91603706 + Ifnar1 protein_coding retained_intron MGP_WSBEiJ_T0044169.1 MGP_WSBEiJ_G0022343.1 mouse_genomes_project 16 91597277 91608093 + MGP_WSBEiJ_P0044169 Ifnar1 protein_coding protein_coding MGP_WSBEiJ_T0010000.1 MGP_WSBEiJ_G0008157.1 mouse_genomes_project 16 91033292 91033366 + Gm22933 miRNA miRNA MGP_WSBEiJ_T0099182.1 MGP_WSBEiJ_G0037845.1 mouse_genomes_project 16 10347264 10347388 - Gm25276 snoRNA snoRNA MGP_WSBEiJ_T0042629.1 MGP_WSBEiJ_G0021909.1 mouse_genomes_project 16 15160367 15161511 + MGP_WSBEiJ_P0042629 Ccdc188 protein_coding protein_coding MGP_WSBEiJ_T0043167.1 MGP_WSBEiJ_G0022042.1 mouse_genomes_project 16 30039860 30052237 + Tctex1d2 protein_coding retained_intron MGP_WSBEiJ_T0043168.1 MGP_WSBEiJ_G0022042.1 mouse_genomes_project 16 30039874 30052239 + MGP_WSBEiJ_P0043168 Tctex1d2 protein_coding protein_coding MGP_WSBEiJ_T0097938.1 MGP_WSBEiJ_G0036601.1 mouse_genomes_project 16 7964864 7965027 - Gm24145 snRNA snRNA MGP_WSBEiJ_T0042162.1 MGP_WSBEiJ_G0021806.1 mouse_genomes_project 16 5298944 5302080 + MGP_WSBEiJ_P0042162 Gm43786 protein_coding protein_coding MGP_WSBEiJ_T0042163.1 MGP_WSBEiJ_G0021806.1 mouse_genomes_project 16 5301004 5302086 + Gm43786 protein_coding processed_transcript MGP_WSBEiJ_T0043059.1 MGP_WSBEiJ_G0022015.1 mouse_genomes_project 16 27831416 27834510 - MGP_WSBEiJ_P0043059 Gp5 protein_coding protein_coding MGP_WSBEiJ_T0096984.1 MGP_WSBEiJ_G0035665.1 mouse_genomes_project 16 46746051 46746170 - n-R5s36 rRNA rRNA MGP_WSBEiJ_T0043805.1 MGP_WSBEiJ_G0022200.1 mouse_genomes_project 16 55982509 56211311 + MGP_WSBEiJ_P0043805 Filip1l protein_coding protein_coding MGP_WSBEiJ_T0043806.1 MGP_WSBEiJ_G0022200.1 mouse_genomes_project 16 55982693 56154019 + MGP_WSBEiJ_P0043806 Filip1l protein_coding protein_coding MGP_WSBEiJ_T0043807.1 MGP_WSBEiJ_G0022200.1 mouse_genomes_project 16 56187565 56210989 + MGP_WSBEiJ_P0043807 Filip1l protein_coding protein_coding MGP_WSBEiJ_T0044123.1 MGP_WSBEiJ_G0022333.1 mouse_genomes_project 16 91001938 91014401 - MGP_WSBEiJ_P0044123 1110004E09Rik protein_coding protein_coding MGP_WSBEiJ_T0044124.1 MGP_WSBEiJ_G0022333.1 mouse_genomes_project 16 91002082 91006086 - MGP_WSBEiJ_P0044124 1110004E09Rik protein_coding protein_coding MGP_WSBEiJ_T0044125.1 MGP_WSBEiJ_G0022333.1 mouse_genomes_project 16 91002099 91014501 - MGP_WSBEiJ_P0044125 1110004E09Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044126.1 MGP_WSBEiJ_G0022333.1 mouse_genomes_project 16 91003217 91014297 - MGP_WSBEiJ_P0044126 1110004E09Rik protein_coding protein_coding MGP_WSBEiJ_T0044127.1 MGP_WSBEiJ_G0022333.1 mouse_genomes_project 16 91003280 91014080 - MGP_WSBEiJ_P0044127 1110004E09Rik protein_coding protein_coding MGP_WSBEiJ_T0044128.1 MGP_WSBEiJ_G0022333.1 mouse_genomes_project 16 91003478 91014400 - 1110004E09Rik protein_coding processed_transcript MGP_WSBEiJ_T0042101.1 MGP_WSBEiJ_G0021789.1 mouse_genomes_project 16 1526842 1527876 + MGP_WSBEiJ_P0042101 Smim22 protein_coding protein_coding MGP_WSBEiJ_T0042102.1 MGP_WSBEiJ_G0021789.1 mouse_genomes_project 16 1526870 1527597 + Smim22 protein_coding retained_intron MGP_WSBEiJ_T0042103.1 MGP_WSBEiJ_G0021789.1 mouse_genomes_project 16 1526891 1527879 + MGP_WSBEiJ_P0042103 Smim22 protein_coding protein_coding MGP_WSBEiJ_T0042104.1 MGP_WSBEiJ_G0021789.1 mouse_genomes_project 16 1526906 1527879 + Smim22 protein_coding processed_transcript MGP_WSBEiJ_T0042105.1 MGP_WSBEiJ_G0021789.1 mouse_genomes_project 16 1526906 1527879 + MGP_WSBEiJ_P0042105 Smim22 protein_coding protein_coding MGP_WSBEiJ_T0042106.1 MGP_WSBEiJ_G0021789.1 mouse_genomes_project 16 1526906 1527876 + MGP_WSBEiJ_P0042106 Smim22 protein_coding protein_coding MGP_WSBEiJ_T0042107.1 MGP_WSBEiJ_G0021789.1 mouse_genomes_project 16 1526913 1527879 + Smim22 protein_coding processed_transcript MGP_WSBEiJ_T0042108.1 MGP_WSBEiJ_G0021789.1 mouse_genomes_project 16 1527322 1527879 + Smim22 protein_coding retained_intron MGP_WSBEiJ_T0000948.1 MGP_WSBEiJ_G0000884.1 mouse_genomes_project 16 96139779 96140625 + TEC TEC MGP_WSBEiJ_T0044183.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91774680 91806328 + MGP_WSBEiJ_P0044183 Son protein_coding protein_coding MGP_WSBEiJ_T0044184.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91775053 91806316 + MGP_WSBEiJ_P0044184 Son protein_coding protein_coding MGP_WSBEiJ_T0044185.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91775053 91806316 + MGP_WSBEiJ_P0044185 Son protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044186.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91775053 91792829 + MGP_WSBEiJ_P0044186 Son protein_coding protein_coding MGP_WSBEiJ_T0044187.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91775054 91791154 + MGP_WSBEiJ_P0044187 Son protein_coding protein_coding MGP_WSBEiJ_T0044188.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91775059 91806342 + MGP_WSBEiJ_P0044188 Son protein_coding protein_coding MGP_WSBEiJ_T0044189.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91787105 91806313 + MGP_WSBEiJ_P0044189 Son protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044190.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91791340 91799262 + Son protein_coding processed_transcript MGP_WSBEiJ_T0044191.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91798469 91799831 + Son protein_coding processed_transcript MGP_WSBEiJ_T0044192.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91800561 91804733 + Son protein_coding processed_transcript MGP_WSBEiJ_T0044193.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91800791 91805241 + Son protein_coding processed_transcript MGP_WSBEiJ_T0044194.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91801227 91805622 + Son protein_coding processed_transcript MGP_WSBEiJ_T0044195.1 MGP_WSBEiJ_G0022348.1 mouse_genomes_project 16 91802052 91804555 + Son protein_coding retained_intron MGP_WSBEiJ_T0042900.1 MGP_WSBEiJ_G0021965.1 mouse_genomes_project 16 18959577 18987610 - MGP_WSBEiJ_P0042900 Ehhadh protein_coding protein_coding MGP_WSBEiJ_T0000016.1 MGP_WSBEiJ_G0000011.1 mouse_genomes_project 16 16093809 16094263 - MGP_WSBEiJ_P0000016 Iglc1 IG_C_gene IG_C_gene MGP_WSBEiJ_T0042899.1 MGP_WSBEiJ_G0021964.1 mouse_genomes_project 16 18845453 18893284 - MGP_WSBEiJ_P0042899 2510009E07Rik protein_coding protein_coding MGP_WSBEiJ_T0045348.1 MGP_WSBEiJ_G0022673.1 mouse_genomes_project 17 24805313 24812599 - MGP_WSBEiJ_P0045348 A930017K11Rik protein_coding protein_coding MGP_WSBEiJ_T0047243.1 MGP_WSBEiJ_G0023185.1 mouse_genomes_project 17 57871301 57873568 - MGP_WSBEiJ_P0047243 Lrg1 protein_coding protein_coding MGP_WSBEiJ_T0003675.1 MGP_WSBEiJ_G0003310.1 mouse_genomes_project 17 33802473 33808014 - Gm20496 antisense antisense MGP_WSBEiJ_T0003676.1 MGP_WSBEiJ_G0003310.1 mouse_genomes_project 17 33803154 33809472 - Gm20496 antisense antisense MGP_WSBEiJ_T0046780.1 MGP_WSBEiJ_G0023051.1 mouse_genomes_project 17 44680119 44769962 + MGP_WSBEiJ_P0046780 Cyp39a1 protein_coding protein_coding MGP_WSBEiJ_T0016998.1 MGP_WSBEiJ_G0014774.1 mouse_genomes_project 17 50882268 50883571 - Gm20540 processed_transcript processed_transcript MGP_WSBEiJ_T0046677.1 MGP_WSBEiJ_G0022976.1 mouse_genomes_project 17 37454859 37455913 - MGP_WSBEiJ_P0046677 protein_coding protein_coding MGP_WSBEiJ_T0045093.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23699844 23746055 - MGP_WSBEiJ_P0045093 Mapk8ip3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045108.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23705207 23746094 - MGP_WSBEiJ_P0045108 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045109.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23705207 23746094 - MGP_WSBEiJ_P0045109 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045110.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23705234 23746029 - MGP_WSBEiJ_P0045110 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045111.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23705234 23746085 - MGP_WSBEiJ_P0045111 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045112.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23705234 23746011 - MGP_WSBEiJ_P0045112 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045113.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23705234 23746084 - MGP_WSBEiJ_P0045113 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045114.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23705235 23746046 - MGP_WSBEiJ_P0045114 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045115.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23706309 23707419 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0045116.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23706500 23746077 - MGP_WSBEiJ_P0045116 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045117.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23706649 23746085 - MGP_WSBEiJ_P0045117 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045118.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23707365 23708788 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0045119.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23708245 23709420 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0045120.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23709519 23710784 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0045121.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23710392 23711067 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0045122.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23712231 23713490 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0045123.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23712882 23714502 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0045124.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23714538 23724359 - Mapk8ip3 protein_coding processed_transcript MGP_WSBEiJ_T0045125.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23714628 23732855 - MGP_WSBEiJ_P0045125 Mapk8ip3 protein_coding protein_coding MGP_WSBEiJ_T0045126.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23723146 23733198 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0045127.1 MGP_WSBEiJ_G0022620.1 mouse_genomes_project 17 23736600 23746062 - Mapk8ip3 protein_coding retained_intron MGP_WSBEiJ_T0044947.1 MGP_WSBEiJ_G0022580.1 mouse_genomes_project 17 22911218 22938899 - MGP_WSBEiJ_P0044947 Gm43796 protein_coding protein_coding MGP_WSBEiJ_T0044842.1 MGP_WSBEiJ_G0022546.1 mouse_genomes_project 17 21367038 21373865 + MGP_WSBEiJ_P0044842 Gm5493 protein_coding protein_coding MGP_WSBEiJ_T0100640.1 MGP_WSBEiJ_G0039098.1 mouse_genomes_project 17 35164058 35166169 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0003697.1 MGP_WSBEiJ_G0003328.1 mouse_genomes_project 17 48991152 48997988 + antisense antisense MGP_WSBEiJ_T0046031.1 MGP_WSBEiJ_G0022838.1 mouse_genomes_project 17 33581860 33585753 - MGP_WSBEiJ_P0046031 Ring1 protein_coding protein_coding MGP_WSBEiJ_T0046032.1 MGP_WSBEiJ_G0022838.1 mouse_genomes_project 17 33582174 33585009 - Ring1 protein_coding retained_intron MGP_WSBEiJ_T0046033.1 MGP_WSBEiJ_G0022838.1 mouse_genomes_project 17 33585263 33585725 - Ring1 protein_coding retained_intron MGP_WSBEiJ_T0047359.1 MGP_WSBEiJ_G0023235.1 mouse_genomes_project 17 59349680 59387570 - MGP_WSBEiJ_P0047359 Vmn2r120 protein_coding protein_coding MGP_WSBEiJ_T0045700.1 MGP_WSBEiJ_G0022752.1 mouse_genomes_project 17 28699782 28706296 + MGP_WSBEiJ_P0045700 Pim1 protein_coding protein_coding MGP_WSBEiJ_T0006867.1 MGP_WSBEiJ_G0005654.1 mouse_genomes_project 17 57696393 57701010 - Gm16712 lincRNA lincRNA MGP_WSBEiJ_T0045209.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24197489 24262793 - MGP_WSBEiJ_P0045209 Cacna1h protein_coding protein_coding MGP_WSBEiJ_T0045210.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24197490 24262983 - MGP_WSBEiJ_P0045210 Cacna1h protein_coding unknown_likely_coding MGP_WSBEiJ_T0045211.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24197492 24262793 - MGP_WSBEiJ_P0045211 Cacna1h protein_coding protein_coding MGP_WSBEiJ_T0045212.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24197499 24262793 - MGP_WSBEiJ_P0045212 Cacna1h protein_coding protein_coding MGP_WSBEiJ_T0045213.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24200089 24204652 - MGP_WSBEiJ_P0045213 Cacna1h protein_coding protein_coding MGP_WSBEiJ_T0045214.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24200401 24204280 - MGP_WSBEiJ_P0045214 Cacna1h protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045215.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24200756 24202119 - Cacna1h protein_coding retained_intron MGP_WSBEiJ_T0045216.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24212240 24213475 - Cacna1h protein_coding retained_intron MGP_WSBEiJ_T0045217.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24216255 24262778 - Cacna1h protein_coding retained_intron MGP_WSBEiJ_T0045218.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24221632 24262288 - MGP_WSBEiJ_P0045218 Cacna1h protein_coding protein_coding MGP_WSBEiJ_T0045219.1 MGP_WSBEiJ_G0022644.1 mouse_genomes_project 17 24260839 24262793 - Cacna1h protein_coding retained_intron MGP_WSBEiJ_T0011237.1 MGP_WSBEiJ_G0009394.1 mouse_genomes_project 17 88792323 88792549 + Gm27801 misc_RNA misc_RNA MGP_WSBEiJ_T0044806.1 MGP_WSBEiJ_G0022526.1 mouse_genomes_project 17 19867143 19885953 + MGP_WSBEiJ_P0044806 Zfp677 protein_coding protein_coding MGP_WSBEiJ_T0044807.1 MGP_WSBEiJ_G0022526.1 mouse_genomes_project 17 19867143 19885950 + MGP_WSBEiJ_P0044807 Zfp677 protein_coding protein_coding MGP_WSBEiJ_T0045849.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31787351 31801829 - MGP_WSBEiJ_P0045849 Rasal3 protein_coding protein_coding MGP_WSBEiJ_T0045850.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31787353 31801805 - MGP_WSBEiJ_P0045850 Rasal3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045851.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31787362 31801814 - Rasal3 protein_coding retained_intron MGP_WSBEiJ_T0045852.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31787609 31788201 - Rasal3 protein_coding retained_intron MGP_WSBEiJ_T0045853.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31787616 31801827 - MGP_WSBEiJ_P0045853 Rasal3 protein_coding protein_coding MGP_WSBEiJ_T0045854.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31787665 31801783 - MGP_WSBEiJ_P0045854 Rasal3 protein_coding protein_coding MGP_WSBEiJ_T0045855.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31789331 31790419 - Rasal3 protein_coding retained_intron MGP_WSBEiJ_T0045856.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31790615 31792064 - Rasal3 protein_coding retained_intron MGP_WSBEiJ_T0045857.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31792259 31793402 - Rasal3 protein_coding retained_intron MGP_WSBEiJ_T0045858.1 MGP_WSBEiJ_G0022791.1 mouse_genomes_project 17 31795480 31801827 - Rasal3 protein_coding retained_intron MGP_WSBEiJ_T0044540.1 MGP_WSBEiJ_G0022422.1 mouse_genomes_project 17 5194247 5261100 - MGP_WSBEiJ_P0044540 Fndc1 protein_coding protein_coding MGP_WSBEiJ_T0044541.1 MGP_WSBEiJ_G0022422.1 mouse_genomes_project 17 5202989 5217355 - Fndc1 protein_coding processed_transcript MGP_WSBEiJ_T0044542.1 MGP_WSBEiJ_G0022422.1 mouse_genomes_project 17 5217636 5223882 - Fndc1 protein_coding retained_intron MGP_WSBEiJ_T0044543.1 MGP_WSBEiJ_G0022422.1 mouse_genomes_project 17 5239321 5284523 - MGP_WSBEiJ_P0044543 Fndc1 protein_coding protein_coding MGP_WSBEiJ_T0044544.1 MGP_WSBEiJ_G0022422.1 mouse_genomes_project 17 5256993 5284523 - MGP_WSBEiJ_P0044544 Fndc1 protein_coding protein_coding MGP_WSBEiJ_T0010066.1 MGP_WSBEiJ_G0008223.1 mouse_genomes_project 17 94605529 94605590 + Gm27475 miRNA miRNA MGP_WSBEiJ_T0045538.1 MGP_WSBEiJ_G0022721.1 mouse_genomes_project 17 27253622 27283620 + Zfp523 protein_coding retained_intron MGP_WSBEiJ_T0045539.1 MGP_WSBEiJ_G0022721.1 mouse_genomes_project 17 27253754 27283620 + MGP_WSBEiJ_P0045539 Zfp523 protein_coding protein_coding MGP_WSBEiJ_T0045540.1 MGP_WSBEiJ_G0022721.1 mouse_genomes_project 17 27253833 27283618 + MGP_WSBEiJ_P0045540 Zfp523 protein_coding protein_coding MGP_WSBEiJ_T0045541.1 MGP_WSBEiJ_G0022721.1 mouse_genomes_project 17 27266338 27275529 + Zfp523 protein_coding processed_transcript MGP_WSBEiJ_T0045542.1 MGP_WSBEiJ_G0022721.1 mouse_genomes_project 17 27275513 27280212 + MGP_WSBEiJ_P0045542 Zfp523 protein_coding protein_coding MGP_WSBEiJ_T0045543.1 MGP_WSBEiJ_G0022721.1 mouse_genomes_project 17 27280024 27282896 + MGP_WSBEiJ_P0045543 Zfp523 protein_coding protein_coding MGP_WSBEiJ_T0045544.1 MGP_WSBEiJ_G0022721.1 mouse_genomes_project 17 27280199 27283620 + MGP_WSBEiJ_P0045544 Zfp523 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045545.1 MGP_WSBEiJ_G0022721.1 mouse_genomes_project 17 27281842 27283041 + Zfp523 protein_coding retained_intron MGP_WSBEiJ_T0044764.1 MGP_WSBEiJ_G0022491.1 mouse_genomes_project 17 16090442 16186138 + MGP_WSBEiJ_P0044764 Fpr3 protein_coding protein_coding MGP_WSBEiJ_T0044766.1 MGP_WSBEiJ_G0022491.1 mouse_genomes_project 17 16184931 16186138 + MGP_WSBEiJ_P0044766 Fpr3 protein_coding protein_coding MGP_WSBEiJ_T0010048.1 MGP_WSBEiJ_G0008205.1 mouse_genomes_project 17 35943196 35943281 - Mir877 miRNA miRNA MGP_WSBEiJ_T0100674.1 MGP_WSBEiJ_G0039132.1 mouse_genomes_project 17 38761555 38763267 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098006.1 MGP_WSBEiJ_G0036669.1 mouse_genomes_project 17 59556239 59556351 + Gm25102 snRNA snRNA MGP_WSBEiJ_T0045469.1 MGP_WSBEiJ_G0022703.1 mouse_genomes_project 17 26034322 26107648 + MGP_WSBEiJ_P0045469 Itpr3 protein_coding protein_coding MGP_WSBEiJ_T0046980.1 MGP_WSBEiJ_G0023101.1 mouse_genomes_project 17 47899964 47916478 + Pex6 protein_coding retained_intron MGP_WSBEiJ_T0046981.1 MGP_WSBEiJ_G0023101.1 mouse_genomes_project 17 47899964 47916478 + MGP_WSBEiJ_P0046981 Pex6 protein_coding protein_coding MGP_WSBEiJ_T0046982.1 MGP_WSBEiJ_G0023101.1 mouse_genomes_project 17 47899977 47906913 + Pex6 protein_coding processed_transcript MGP_WSBEiJ_T0046983.1 MGP_WSBEiJ_G0023101.1 mouse_genomes_project 17 47911084 47912628 + Pex6 protein_coding retained_intron MGP_WSBEiJ_T0016965.1 MGP_WSBEiJ_G0014762.1 mouse_genomes_project 17 24410915 24415146 + 2810468N07Rik processed_transcript processed_transcript MGP_WSBEiJ_T0100607.1 MGP_WSBEiJ_G0039065.1 mouse_genomes_project 17 16333437 17521658 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045899.1 MGP_WSBEiJ_G0022809.1 mouse_genomes_project 17 32623975 32628066 - MGP_WSBEiJ_P0045899 Morc2b protein_coding protein_coding MGP_WSBEiJ_T0045900.1 MGP_WSBEiJ_G0022809.1 mouse_genomes_project 17 32624030 32627882 - MGP_WSBEiJ_P0045900 Morc2b protein_coding protein_coding MGP_WSBEiJ_T0098009.1 MGP_WSBEiJ_G0036672.1 mouse_genomes_project 17 68297613 68297720 + Gm23264 snRNA snRNA MGP_WSBEiJ_T0100642.1 MGP_WSBEiJ_G0039100.1 mouse_genomes_project 17 36113996 36116374 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046593.1 MGP_WSBEiJ_G0022955.1 mouse_genomes_project 17 36356822 36358013 - MGP_WSBEiJ_P0046593 protein_coding protein_coding MGP_WSBEiJ_T0046684.1 MGP_WSBEiJ_G0022983.1 mouse_genomes_project 17 37549400 37551302 - MGP_WSBEiJ_P0046684 Olfr97 protein_coding protein_coding MGP_WSBEiJ_T0047345.1 MGP_WSBEiJ_G0023230.1 mouse_genomes_project 17 59059142 59083996 - MGP_WSBEiJ_P0047345 C3 protein_coding protein_coding MGP_WSBEiJ_T0047346.1 MGP_WSBEiJ_G0023230.1 mouse_genomes_project 17 59059179 59078709 - MGP_WSBEiJ_P0047346 C3 protein_coding protein_coding MGP_WSBEiJ_T0047347.1 MGP_WSBEiJ_G0023230.1 mouse_genomes_project 17 59061388 59083863 - MGP_WSBEiJ_P0047347 C3 protein_coding protein_coding MGP_WSBEiJ_T0047348.1 MGP_WSBEiJ_G0023230.1 mouse_genomes_project 17 59071665 59075899 - C3 protein_coding processed_transcript MGP_WSBEiJ_T0006844.1 MGP_WSBEiJ_G0005638.1 mouse_genomes_project 17 35702668 35704743 - Gm20443 lincRNA lincRNA MGP_WSBEiJ_T0100632.1 MGP_WSBEiJ_G0039090.1 mouse_genomes_project 17 33650283 33651438 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047302.1 MGP_WSBEiJ_G0023204.1 mouse_genomes_project 17 58414818 58457942 + MGP_WSBEiJ_P0047302 Catsperd protein_coding protein_coding MGP_WSBEiJ_T0045953.1 MGP_WSBEiJ_G0022822.1 mouse_genomes_project 17 33261198 33281457 - MGP_WSBEiJ_P0045953 Rab11b protein_coding protein_coding MGP_WSBEiJ_T0045954.1 MGP_WSBEiJ_G0022822.1 mouse_genomes_project 17 33265600 33281233 - MGP_WSBEiJ_P0045954 Rab11b protein_coding protein_coding MGP_WSBEiJ_T0045955.1 MGP_WSBEiJ_G0022822.1 mouse_genomes_project 17 33265600 33270488 - MGP_WSBEiJ_P0045955 Rab11b protein_coding protein_coding MGP_WSBEiJ_T0045956.1 MGP_WSBEiJ_G0022822.1 mouse_genomes_project 17 33266153 33281207 - MGP_WSBEiJ_P0045956 Rab11b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045957.1 MGP_WSBEiJ_G0022822.1 mouse_genomes_project 17 33269600 33281411 - Rab11b protein_coding processed_transcript MGP_WSBEiJ_T0046848.1 MGP_WSBEiJ_G0023067.1 mouse_genomes_project 17 46702583 46703719 - MGP_WSBEiJ_P0046848 Gm7325 protein_coding protein_coding MGP_WSBEiJ_T0046849.1 MGP_WSBEiJ_G0023067.1 mouse_genomes_project 17 46702583 46703684 - MGP_WSBEiJ_P0046849 Gm7325 protein_coding protein_coding MGP_WSBEiJ_T0046850.1 MGP_WSBEiJ_G0023067.1 mouse_genomes_project 17 46702583 46703532 - MGP_WSBEiJ_P0046850 Gm7325 protein_coding protein_coding MGP_WSBEiJ_T0099252.1 MGP_WSBEiJ_G0037915.1 mouse_genomes_project 17 74193271 74193349 + Snord53 snoRNA snoRNA MGP_WSBEiJ_T0100240.1 MGP_WSBEiJ_G0038781.1 mouse_genomes_project 17 35138532 35142088 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0046863.1 MGP_WSBEiJ_G0023071.1 mouse_genomes_project 17 46852392 46853373 - MGP_WSBEiJ_P0046863 1600014C23Rik protein_coding protein_coding MGP_WSBEiJ_T0012925.1 MGP_WSBEiJ_G0011055.1 mouse_genomes_project 17 34000672 34000959 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010049.1 MGP_WSBEiJ_G0008206.1 mouse_genomes_project 17 40072709 40072819 - Gm26376 miRNA miRNA MGP_WSBEiJ_T0044619.1 MGP_WSBEiJ_G0022447.1 mouse_genomes_project 17 10287080 10327648 + MGP_WSBEiJ_P0044619 Plg protein_coding protein_coding MGP_WSBEiJ_T0046015.1 MGP_WSBEiJ_G0022833.1 mouse_genomes_project 17 33483039 33484561 - MGP_WSBEiJ_P0046015 Pfdn6 protein_coding protein_coding MGP_WSBEiJ_T0046016.1 MGP_WSBEiJ_G0022833.1 mouse_genomes_project 17 33483128 33484548 - MGP_WSBEiJ_P0046016 Pfdn6 protein_coding protein_coding MGP_WSBEiJ_T0046017.1 MGP_WSBEiJ_G0022833.1 mouse_genomes_project 17 33483137 33484543 - MGP_WSBEiJ_P0046017 Pfdn6 protein_coding protein_coding MGP_WSBEiJ_T0046018.1 MGP_WSBEiJ_G0022833.1 mouse_genomes_project 17 33483141 33484523 - MGP_WSBEiJ_P0046018 Pfdn6 protein_coding protein_coding MGP_WSBEiJ_T0046019.1 MGP_WSBEiJ_G0022833.1 mouse_genomes_project 17 33483164 33484548 - MGP_WSBEiJ_P0046019 Pfdn6 protein_coding protein_coding MGP_WSBEiJ_T0046020.1 MGP_WSBEiJ_G0022833.1 mouse_genomes_project 17 33483576 33484038 - Pfdn6 protein_coding retained_intron MGP_WSBEiJ_T0010009.1 MGP_WSBEiJ_G0008166.1 mouse_genomes_project 17 16033043 16033113 + Mir99b miRNA miRNA MGP_WSBEiJ_T0097995.1 MGP_WSBEiJ_G0036658.1 mouse_genomes_project 17 35153261 35153380 - Gm23111 snRNA snRNA MGP_WSBEiJ_T0044559.1 MGP_WSBEiJ_G0022432.1 mouse_genomes_project 17 5978115 6004582 + MGP_WSBEiJ_P0044559 Ccr6 protein_coding protein_coding MGP_WSBEiJ_T0044560.1 MGP_WSBEiJ_G0022432.1 mouse_genomes_project 17 5986571 6004582 + MGP_WSBEiJ_P0044560 Ccr6 protein_coding protein_coding MGP_WSBEiJ_T0044561.1 MGP_WSBEiJ_G0022432.1 mouse_genomes_project 17 5987857 6004582 + MGP_WSBEiJ_P0044561 Ccr6 protein_coding protein_coding MGP_WSBEiJ_T0044562.1 MGP_WSBEiJ_G0022432.1 mouse_genomes_project 17 5987857 6004582 + MGP_WSBEiJ_P0044562 Ccr6 protein_coding protein_coding MGP_WSBEiJ_T0044563.1 MGP_WSBEiJ_G0022432.1 mouse_genomes_project 17 5987857 6004582 + MGP_WSBEiJ_P0044563 Ccr6 protein_coding protein_coding MGP_WSBEiJ_T0044564.1 MGP_WSBEiJ_G0022432.1 mouse_genomes_project 17 5987857 6004582 + MGP_WSBEiJ_P0044564 Ccr6 protein_coding protein_coding MGP_WSBEiJ_T0046884.1 MGP_WSBEiJ_G0023075.1 mouse_genomes_project 17 47292704 47297793 - MGP_WSBEiJ_P0046884 Mad2l1bp protein_coding protein_coding MGP_WSBEiJ_T0012940.1 MGP_WSBEiJ_G0011070.1 mouse_genomes_project 17 38269957 38270894 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046111.1 MGP_WSBEiJ_G0022854.1 mouse_genomes_project 17 33857282 33863269 + MGP_WSBEiJ_P0046111 H2-Ab1 protein_coding protein_coding MGP_WSBEiJ_T0046112.1 MGP_WSBEiJ_G0022854.1 mouse_genomes_project 17 33860996 33861929 + H2-Ab1 protein_coding retained_intron MGP_WSBEiJ_T0046113.1 MGP_WSBEiJ_G0022854.1 mouse_genomes_project 17 33862127 33863245 + H2-Ab1 protein_coding retained_intron MGP_WSBEiJ_T0044763.1 MGP_WSBEiJ_G0022490.1 mouse_genomes_project 17 16090414 16098587 + protein_coding processed_transcript MGP_WSBEiJ_T0045037.1 MGP_WSBEiJ_G0022600.1 mouse_genomes_project 17 23423906 23434901 - MGP_WSBEiJ_P0045037 Slc9a3r2 protein_coding protein_coding MGP_WSBEiJ_T0045038.1 MGP_WSBEiJ_G0022600.1 mouse_genomes_project 17 23423906 23429512 - MGP_WSBEiJ_P0045038 Slc9a3r2 protein_coding protein_coding MGP_WSBEiJ_T0012967.1 MGP_WSBEiJ_G0011097.1 mouse_genomes_project 17 75282171 75283112 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097989.1 MGP_WSBEiJ_G0036652.1 mouse_genomes_project 17 28151802 28151974 - Gm23887 snRNA snRNA MGP_WSBEiJ_T0047200.1 MGP_WSBEiJ_G0023162.1 mouse_genomes_project 17 55500065 55521687 - MGP_WSBEiJ_P0047200 Sult1c2 protein_coding protein_coding MGP_WSBEiJ_T0010044.1 MGP_WSBEiJ_G0008201.1 mouse_genomes_project 17 35053628 35053689 + Mir6975 miRNA miRNA MGP_WSBEiJ_T0047587.1 MGP_WSBEiJ_G0023303.1 mouse_genomes_project 17 77716305 78132042 + MGP_WSBEiJ_P0047587 Ltbp1 protein_coding protein_coding MGP_WSBEiJ_T0047588.1 MGP_WSBEiJ_G0023303.1 mouse_genomes_project 17 77907909 78087332 + MGP_WSBEiJ_P0047588 Ltbp1 protein_coding protein_coding MGP_WSBEiJ_T0047589.1 MGP_WSBEiJ_G0023303.1 mouse_genomes_project 17 77907909 78131611 + MGP_WSBEiJ_P0047589 Ltbp1 protein_coding protein_coding MGP_WSBEiJ_T0047590.1 MGP_WSBEiJ_G0023303.1 mouse_genomes_project 17 77908010 78131598 + MGP_WSBEiJ_P0047590 Ltbp1 protein_coding protein_coding MGP_WSBEiJ_T0047591.1 MGP_WSBEiJ_G0023303.1 mouse_genomes_project 17 78026260 78030650 + Ltbp1 protein_coding retained_intron MGP_WSBEiJ_T0047592.1 MGP_WSBEiJ_G0023303.1 mouse_genomes_project 17 78124479 78132787 + Ltbp1 protein_coding retained_intron MGP_WSBEiJ_T0044623.1 MGP_WSBEiJ_G0022451.1 mouse_genomes_project 17 10592391 10679679 - MGP_WSBEiJ_P0044623 Igf2r protein_coding protein_coding MGP_WSBEiJ_T0044624.1 MGP_WSBEiJ_G0022451.1 mouse_genomes_project 17 10592395 10679810 - MGP_WSBEiJ_P0044624 Igf2r protein_coding protein_coding MGP_WSBEiJ_T0044625.1 MGP_WSBEiJ_G0022451.1 mouse_genomes_project 17 10608487 10611240 - MGP_WSBEiJ_P0044625 Igf2r protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044626.1 MGP_WSBEiJ_G0022451.1 mouse_genomes_project 17 10659175 10661575 - MGP_WSBEiJ_P0044626 Igf2r protein_coding protein_coding MGP_WSBEiJ_T0046409.1 MGP_WSBEiJ_G0022919.1 mouse_genomes_project 17 35043292 35048409 + Atp6v1g2 protein_coding retained_intron MGP_WSBEiJ_T0046410.1 MGP_WSBEiJ_G0022919.1 mouse_genomes_project 17 35044726 35047447 + MGP_WSBEiJ_P0046410 Atp6v1g2 protein_coding protein_coding MGP_WSBEiJ_T0046411.1 MGP_WSBEiJ_G0022919.1 mouse_genomes_project 17 35045513 35047546 + MGP_WSBEiJ_P0046411 Atp6v1g2 protein_coding protein_coding MGP_WSBEiJ_T0046412.1 MGP_WSBEiJ_G0022919.1 mouse_genomes_project 17 35045527 35047715 + Atp6v1g2 protein_coding retained_intron MGP_WSBEiJ_T0046413.1 MGP_WSBEiJ_G0022919.1 mouse_genomes_project 17 35046197 35048409 + MGP_WSBEiJ_P0046413 Atp6v1g2 protein_coding protein_coding MGP_WSBEiJ_T0046414.1 MGP_WSBEiJ_G0022919.1 mouse_genomes_project 17 35046291 35047609 + Atp6v1g2 protein_coding retained_intron MGP_WSBEiJ_T0046680.1 MGP_WSBEiJ_G0022979.1 mouse_genomes_project 17 37513154 37514456 - MGP_WSBEiJ_P0046680 Olfr94 protein_coding protein_coding MGP_WSBEiJ_T0046441.1 MGP_WSBEiJ_G0022926.1 mouse_genomes_project 17 35476555 35478002 + MGP_WSBEiJ_P0046441 Psors1c2 protein_coding protein_coding MGP_WSBEiJ_T0046629.1 MGP_WSBEiJ_G0022965.1 mouse_genomes_project 17 37165343 37178661 + MGP_WSBEiJ_P0046629 Trim31 protein_coding protein_coding MGP_WSBEiJ_T0047349.1 MGP_WSBEiJ_G0023231.1 mouse_genomes_project 17 59090752 59104453 - MGP_WSBEiJ_P0047349 Gpr108 protein_coding protein_coding MGP_WSBEiJ_T0046313.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34810018 34811288 - Msh5 protein_coding processed_transcript MGP_WSBEiJ_T0046314.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34810018 34827290 - MGP_WSBEiJ_P0046314 Msh5 protein_coding protein_coding MGP_WSBEiJ_T0046315.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34810018 34829387 - MGP_WSBEiJ_P0046315 Msh5 protein_coding protein_coding MGP_WSBEiJ_T0046316.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34810022 34814714 - MGP_WSBEiJ_P0046316 Msh5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046317.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34810096 34827210 - MGP_WSBEiJ_P0046317 Msh5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046318.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34810096 34827210 - MGP_WSBEiJ_P0046318 Msh5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046319.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34817944 34829406 - MGP_WSBEiJ_P0046319 Msh5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046320.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34820001 34824435 - Msh5 protein_coding retained_intron MGP_WSBEiJ_T0046321.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34820001 34827193 - Msh5 protein_coding retained_intron MGP_WSBEiJ_T0046322.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34824633 34826784 - Msh5 protein_coding retained_intron MGP_WSBEiJ_T0046323.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34824642 34825679 - Msh5 protein_coding retained_intron MGP_WSBEiJ_T0046324.1 MGP_WSBEiJ_G0022895.1 mouse_genomes_project 17 34824767 34827188 - MGP_WSBEiJ_P0046324 Msh5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012969.1 MGP_WSBEiJ_G0011099.1 mouse_genomes_project 17 75822110 75822603 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044913.1 MGP_WSBEiJ_G0022569.1 mouse_genomes_project 17 22534653 22541992 - MGP_WSBEiJ_P0044913 Prss41 protein_coding protein_coding MGP_WSBEiJ_T0044914.1 MGP_WSBEiJ_G0022569.1 mouse_genomes_project 17 22534653 22541975 - MGP_WSBEiJ_P0044914 Prss41 protein_coding protein_coding MGP_WSBEiJ_T0044915.1 MGP_WSBEiJ_G0022569.1 mouse_genomes_project 17 22538949 22541992 - MGP_WSBEiJ_P0044915 Prss41 protein_coding protein_coding MGP_WSBEiJ_T0044916.1 MGP_WSBEiJ_G0022569.1 mouse_genomes_project 17 22540078 22541969 - Prss41 protein_coding retained_intron MGP_WSBEiJ_T0099234.1 MGP_WSBEiJ_G0037897.1 mouse_genomes_project 17 23307259 23307337 + Snord60 snoRNA snoRNA MGP_WSBEiJ_T0045445.1 MGP_WSBEiJ_G0022697.1 mouse_genomes_project 17 25892546 25897313 + MGP_WSBEiJ_P0045445 Phf1 protein_coding protein_coding MGP_WSBEiJ_T0046808.1 MGP_WSBEiJ_G0023058.1 mouse_genomes_project 17 46480063 46523051 - MGP_WSBEiJ_P0046808 Cdc5l protein_coding protein_coding MGP_WSBEiJ_T0006882.1 MGP_WSBEiJ_G0005664.1 mouse_genomes_project 17 82210306 82213633 + Gm17315 lincRNA lincRNA MGP_WSBEiJ_T0045248.1 MGP_WSBEiJ_G0022653.1 mouse_genomes_project 17 24597417 24603113 - MGP_WSBEiJ_P0045248 Msln protein_coding protein_coding MGP_WSBEiJ_T0045636.1 MGP_WSBEiJ_G0022739.1 mouse_genomes_project 17 28048791 28072303 - MGP_WSBEiJ_P0045636 4930539E08Rik protein_coding unknown_likely_coding MGP_WSBEiJ_T0045637.1 MGP_WSBEiJ_G0022739.1 mouse_genomes_project 17 28049923 28072394 - MGP_WSBEiJ_P0045637 4930539E08Rik protein_coding protein_coding MGP_WSBEiJ_T0046763.1 MGP_WSBEiJ_G0023045.1 mouse_genomes_project 17 44380804 44458480 + MGP_WSBEiJ_P0046763 Adgrf5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046764.1 MGP_WSBEiJ_G0023045.1 mouse_genomes_project 17 44380832 44458478 + MGP_WSBEiJ_P0046764 Adgrf5 protein_coding protein_coding MGP_WSBEiJ_T0099246.1 MGP_WSBEiJ_G0037909.1 mouse_genomes_project 17 56401559 56401696 + Gm26291 snoRNA snoRNA MGP_WSBEiJ_T0100643.1 MGP_WSBEiJ_G0039101.1 mouse_genomes_project 17 36114003 36116672 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006814.1 MGP_WSBEiJ_G0005614.1 mouse_genomes_project 17 25813706 25840764 - Gm17382 lincRNA lincRNA MGP_WSBEiJ_T0006830.1 MGP_WSBEiJ_G0005626.1 mouse_genomes_project 17 30901064 30903049 + 4833413E03Rik lincRNA lincRNA MGP_WSBEiJ_T0006831.1 MGP_WSBEiJ_G0005626.1 mouse_genomes_project 17 30902130 30903052 + 4833413E03Rik lincRNA lincRNA MGP_WSBEiJ_T0044586.1 MGP_WSBEiJ_G0022438.1 mouse_genomes_project 17 6297597 6715938 + MGP_WSBEiJ_P0044586 Pde10a protein_coding protein_coding MGP_WSBEiJ_T0044587.1 MGP_WSBEiJ_G0022438.1 mouse_genomes_project 17 6298983 6775353 + MGP_WSBEiJ_P0044587 Pde10a protein_coding protein_coding MGP_WSBEiJ_T0044590.1 MGP_WSBEiJ_G0022438.1 mouse_genomes_project 17 6584746 6690057 + Pde10a protein_coding retained_intron MGP_WSBEiJ_T0044591.1 MGP_WSBEiJ_G0022438.1 mouse_genomes_project 17 6584832 6779504 + MGP_WSBEiJ_P0044591 Pde10a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044592.1 MGP_WSBEiJ_G0022438.1 mouse_genomes_project 17 6585132 6774513 + MGP_WSBEiJ_P0044592 Pde10a protein_coding protein_coding MGP_WSBEiJ_T0044593.1 MGP_WSBEiJ_G0022438.1 mouse_genomes_project 17 6636298 6775257 + MGP_WSBEiJ_P0044593 Pde10a protein_coding protein_coding MGP_WSBEiJ_T0044594.1 MGP_WSBEiJ_G0022438.1 mouse_genomes_project 17 6684160 6723058 + Pde10a protein_coding processed_transcript MGP_WSBEiJ_T0044595.1 MGP_WSBEiJ_G0022438.1 mouse_genomes_project 17 6716668 6777147 + MGP_WSBEiJ_P0044595 Pde10a protein_coding protein_coding MGP_WSBEiJ_T0047269.1 MGP_WSBEiJ_G0023198.1 mouse_genomes_project 17 58288182 58289418 - MGP_WSBEiJ_P0047269 Znrf4 protein_coding protein_coding MGP_WSBEiJ_T0046902.1 MGP_WSBEiJ_G0023077.1 mouse_genomes_project 17 47316282 47350465 - MGP_WSBEiJ_P0046902 Polh protein_coding protein_coding MGP_WSBEiJ_T0010030.1 MGP_WSBEiJ_G0008187.1 mouse_genomes_project 17 26360388 26360447 + Mir7218 miRNA miRNA MGP_WSBEiJ_T0000957.1 MGP_WSBEiJ_G0000892.1 mouse_genomes_project 17 53310934 53315127 - TEC TEC MGP_WSBEiJ_T0012929.1 MGP_WSBEiJ_G0011059.1 mouse_genomes_project 17 36247575 36247615 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006788.1 MGP_WSBEiJ_G0005594.1 mouse_genomes_project 17 2933338 2937570 + 3300005D01Rik lincRNA lincRNA MGP_WSBEiJ_T0006789.1 MGP_WSBEiJ_G0005594.1 mouse_genomes_project 17 2933380 2937725 + 3300005D01Rik lincRNA lincRNA MGP_WSBEiJ_T0006790.1 MGP_WSBEiJ_G0005594.1 mouse_genomes_project 17 2934172 2937917 + 3300005D01Rik lincRNA lincRNA MGP_WSBEiJ_T0006791.1 MGP_WSBEiJ_G0005594.1 mouse_genomes_project 17 2934333 2937571 + 3300005D01Rik lincRNA lincRNA MGP_WSBEiJ_T0006832.1 MGP_WSBEiJ_G0005627.1 mouse_genomes_project 17 31493070 31529479 + Gm17276 lincRNA lincRNA MGP_WSBEiJ_T0006818.1 MGP_WSBEiJ_G0005618.1 mouse_genomes_project 17 26767989 26774106 + Gm15458 lincRNA lincRNA MGP_WSBEiJ_T0044469.1 MGP_WSBEiJ_G0022400.1 mouse_genomes_project 17 320528 525475 + MGP_WSBEiJ_P0044469 Tiam2 protein_coding protein_coding MGP_WSBEiJ_T0044470.1 MGP_WSBEiJ_G0022400.1 mouse_genomes_project 17 399509 525475 + MGP_WSBEiJ_P0044470 Tiam2 protein_coding protein_coding MGP_WSBEiJ_T0044668.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11465039 11578591 - Tcte2 protein_coding processed_transcript MGP_WSBEiJ_T0044669.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11467077 11776690 - Tcte2 protein_coding processed_transcript MGP_WSBEiJ_T0044670.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11467077 11681596 - Tcte2 protein_coding processed_transcript MGP_WSBEiJ_T0044673.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11726765 11776690 - MGP_WSBEiJ_P0044673 Tcte2 protein_coding protein_coding MGP_WSBEiJ_T0044674.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11726771 11776714 - MGP_WSBEiJ_P0044674 Tcte2 protein_coding protein_coding MGP_WSBEiJ_T0044675.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11728352 11776679 - MGP_WSBEiJ_P0044675 Tcte2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044676.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11728370 11748169 - MGP_WSBEiJ_P0044676 Tcte2 protein_coding protein_coding MGP_WSBEiJ_T0044677.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11730757 11776913 - MGP_WSBEiJ_P0044677 Tcte2 protein_coding protein_coding MGP_WSBEiJ_T0044678.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11730757 11776698 - MGP_WSBEiJ_P0044678 Tcte2 protein_coding protein_coding MGP_WSBEiJ_T0044679.1 MGP_WSBEiJ_G0022465.1 mouse_genomes_project 17 11730757 11777137 - MGP_WSBEiJ_P0044679 Tcte2 protein_coding protein_coding MGP_WSBEiJ_T0012924.1 MGP_WSBEiJ_G0011054.1 mouse_genomes_project 17 33706224 33706437 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012932.1 MGP_WSBEiJ_G0011062.1 mouse_genomes_project 17 36357440 36357753 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010056.1 MGP_WSBEiJ_G0008213.1 mouse_genomes_project 17 59073128 59073187 - Mir6978 miRNA miRNA MGP_WSBEiJ_T0010012.1 MGP_WSBEiJ_G0008169.1 mouse_genomes_project 17 16033667 16033735 + Mir125a miRNA miRNA MGP_WSBEiJ_T0046547.1 MGP_WSBEiJ_G0022944.1 mouse_genomes_project 17 35892214 35898216 - MGP_WSBEiJ_P0046547 Mrps18b protein_coding protein_coding MGP_WSBEiJ_T0046548.1 MGP_WSBEiJ_G0022944.1 mouse_genomes_project 17 35892214 35898216 - MGP_WSBEiJ_P0046548 Mrps18b protein_coding protein_coding MGP_WSBEiJ_T0046549.1 MGP_WSBEiJ_G0022944.1 mouse_genomes_project 17 35892221 35898157 - MGP_WSBEiJ_P0046549 Mrps18b protein_coding protein_coding MGP_WSBEiJ_T0046550.1 MGP_WSBEiJ_G0022944.1 mouse_genomes_project 17 35892338 35894399 - Mrps18b protein_coding retained_intron MGP_WSBEiJ_T0046551.1 MGP_WSBEiJ_G0022944.1 mouse_genomes_project 17 35892686 35898164 - MGP_WSBEiJ_P0046551 Mrps18b protein_coding protein_coding MGP_WSBEiJ_T0046552.1 MGP_WSBEiJ_G0022944.1 mouse_genomes_project 17 35893276 35898150 - MGP_WSBEiJ_P0046552 Mrps18b protein_coding protein_coding MGP_WSBEiJ_T0046553.1 MGP_WSBEiJ_G0022944.1 mouse_genomes_project 17 35895622 35898204 - Mrps18b protein_coding retained_intron MGP_WSBEiJ_T0046554.1 MGP_WSBEiJ_G0022944.1 mouse_genomes_project 17 35896388 35898030 - Mrps18b protein_coding processed_transcript MGP_WSBEiJ_T0045044.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23489528 23494956 + MGP_WSBEiJ_P0045044 Noxo1 protein_coding protein_coding MGP_WSBEiJ_T0045046.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23492449 23492782 + Noxo1 protein_coding processed_transcript MGP_WSBEiJ_T0045047.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23492602 23493829 + Noxo1 protein_coding processed_transcript MGP_WSBEiJ_T0045048.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23492659 23494952 + Noxo1 protein_coding retained_intron MGP_WSBEiJ_T0045049.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23492665 23494740 + Noxo1 protein_coding retained_intron MGP_WSBEiJ_T0045050.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23492738 23493593 + Noxo1 protein_coding retained_intron MGP_WSBEiJ_T0045051.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23492767 23494105 + Noxo1 protein_coding processed_transcript MGP_WSBEiJ_T0045052.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23492952 23494951 + Noxo1 protein_coding processed_transcript MGP_WSBEiJ_T0045053.1 MGP_WSBEiJ_G0022605.1 mouse_genomes_project 17 23493819 23494943 + Noxo1 protein_coding processed_transcript MGP_WSBEiJ_T0047240.1 MGP_WSBEiJ_G0023183.1 mouse_genomes_project 17 57854589 57861426 - MGP_WSBEiJ_P0047240 protein_coding protein_coding MGP_WSBEiJ_T0044769.1 MGP_WSBEiJ_G0022495.1 mouse_genomes_project 17 16321754 16338494 + MGP_WSBEiJ_P0044769 protein_coding protein_coding MGP_WSBEiJ_T0047382.1 MGP_WSBEiJ_G0023245.1 mouse_genomes_project 17 66756348 66926111 + MGP_WSBEiJ_P0047382 Man2a1 protein_coding protein_coding MGP_WSBEiJ_T0047383.1 MGP_WSBEiJ_G0023245.1 mouse_genomes_project 17 66883051 66884426 + Man2a1 protein_coding retained_intron MGP_WSBEiJ_T0047384.1 MGP_WSBEiJ_G0023245.1 mouse_genomes_project 17 66883242 66925840 + MGP_WSBEiJ_P0047384 Man2a1 protein_coding protein_coding MGP_WSBEiJ_T0044929.1 MGP_WSBEiJ_G0022576.1 mouse_genomes_project 17 22773491 22781118 + MGP_WSBEiJ_P0044929 Prss27 protein_coding protein_coding MGP_WSBEiJ_T0047344.1 MGP_WSBEiJ_G0023229.1 mouse_genomes_project 17 59044555 59049268 - MGP_WSBEiJ_P0047344 Tnfsf14 protein_coding protein_coding MGP_WSBEiJ_T0045889.1 MGP_WSBEiJ_G0022805.1 mouse_genomes_project 17 32487598 32493145 + Zfp952 protein_coding processed_transcript MGP_WSBEiJ_T0045890.1 MGP_WSBEiJ_G0022805.1 mouse_genomes_project 17 32487666 32501020 + Zfp952 protein_coding processed_transcript MGP_WSBEiJ_T0045891.1 MGP_WSBEiJ_G0022805.1 mouse_genomes_project 17 32487666 32501020 + MGP_WSBEiJ_P0045891 Zfp952 protein_coding protein_coding MGP_WSBEiJ_T0045892.1 MGP_WSBEiJ_G0022805.1 mouse_genomes_project 17 32487670 32498649 + MGP_WSBEiJ_P0045892 Zfp952 protein_coding protein_coding MGP_WSBEiJ_T0016983.1 MGP_WSBEiJ_G0014771.1 mouse_genomes_project 17 34726211 34727207 - 1110038B12Rik processed_transcript retained_intron MGP_WSBEiJ_T0016984.1 MGP_WSBEiJ_G0014771.1 mouse_genomes_project 17 34726214 34728486 - 1110038B12Rik processed_transcript lincRNA MGP_WSBEiJ_T0016985.1 MGP_WSBEiJ_G0014771.1 mouse_genomes_project 17 34726214 34728463 - 1110038B12Rik processed_transcript lincRNA MGP_WSBEiJ_T0016986.1 MGP_WSBEiJ_G0014771.1 mouse_genomes_project 17 34726214 34728471 - 1110038B12Rik processed_transcript retained_intron MGP_WSBEiJ_T0016987.1 MGP_WSBEiJ_G0014771.1 mouse_genomes_project 17 34726215 34728449 - 1110038B12Rik processed_transcript retained_intron MGP_WSBEiJ_T0016988.1 MGP_WSBEiJ_G0014771.1 mouse_genomes_project 17 34726216 34728483 - 1110038B12Rik processed_transcript lincRNA MGP_WSBEiJ_T0016989.1 MGP_WSBEiJ_G0014771.1 mouse_genomes_project 17 34727411 34728483 - 1110038B12Rik processed_transcript retained_intron MGP_WSBEiJ_T0016990.1 MGP_WSBEiJ_G0014771.1 mouse_genomes_project 17 34727559 34728477 - 1110038B12Rik processed_transcript retained_intron MGP_WSBEiJ_T0045600.1 MGP_WSBEiJ_G0022729.1 mouse_genomes_project 17 27651427 27660978 + MGP_WSBEiJ_P0045600 Armc12 protein_coding protein_coding MGP_WSBEiJ_T0045662.1 MGP_WSBEiJ_G0022744.1 mouse_genomes_project 17 28262783 28271301 + MGP_WSBEiJ_P0045662 Cdkn1a protein_coding protein_coding MGP_WSBEiJ_T0045663.1 MGP_WSBEiJ_G0022744.1 mouse_genomes_project 17 28265576 28272496 + MGP_WSBEiJ_P0045663 Cdkn1a protein_coding protein_coding MGP_WSBEiJ_T0045664.1 MGP_WSBEiJ_G0022744.1 mouse_genomes_project 17 28269980 28271343 + MGP_WSBEiJ_P0045664 Cdkn1a protein_coding protein_coding MGP_WSBEiJ_T0045084.1 MGP_WSBEiJ_G0022618.1 mouse_genomes_project 17 23694534 23699839 + MGP_WSBEiJ_P0045084 Spsb3 protein_coding protein_coding MGP_WSBEiJ_T0045085.1 MGP_WSBEiJ_G0022618.1 mouse_genomes_project 17 23694562 23698354 + MGP_WSBEiJ_P0045085 Spsb3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045086.1 MGP_WSBEiJ_G0022618.1 mouse_genomes_project 17 23694597 23699829 + MGP_WSBEiJ_P0045086 Spsb3 protein_coding protein_coding MGP_WSBEiJ_T0045087.1 MGP_WSBEiJ_G0022618.1 mouse_genomes_project 17 23694619 23699844 + Spsb3 protein_coding retained_intron MGP_WSBEiJ_T0045088.1 MGP_WSBEiJ_G0022618.1 mouse_genomes_project 17 23695009 23699841 + MGP_WSBEiJ_P0045088 Spsb3 protein_coding protein_coding MGP_WSBEiJ_T0045089.1 MGP_WSBEiJ_G0022618.1 mouse_genomes_project 17 23695634 23699461 + MGP_WSBEiJ_P0045089 Spsb3 protein_coding protein_coding MGP_WSBEiJ_T0045090.1 MGP_WSBEiJ_G0022618.1 mouse_genomes_project 17 23695706 23698198 + MGP_WSBEiJ_P0045090 Spsb3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047219.1 MGP_WSBEiJ_G0023177.1 mouse_genomes_project 17 57738656 57749716 - MGP_WSBEiJ_P0047219 Stap2 protein_coding protein_coding MGP_WSBEiJ_T0044480.1 MGP_WSBEiJ_G0022406.1 mouse_genomes_project 17 2528312 2529755 - MGP_WSBEiJ_P0044480 Ldhal6b protein_coding protein_coding MGP_WSBEiJ_T0097300.1 MGP_WSBEiJ_G0035976.1 mouse_genomes_project 17 65380731 65389839 - 4930405O22Rik sense_intronic sense_intronic MGP_WSBEiJ_T0097301.1 MGP_WSBEiJ_G0035976.1 mouse_genomes_project 17 65380964 65389841 - 4930405O22Rik sense_intronic sense_intronic MGP_WSBEiJ_T0098018.1 MGP_WSBEiJ_G0036681.1 mouse_genomes_project 17 89961352 89961462 - Gm22235 snRNA snRNA MGP_WSBEiJ_T0045198.1 MGP_WSBEiJ_G0022638.1 mouse_genomes_project 17 24117258 24119026 + MGP_WSBEiJ_P0045198 Prss34 protein_coding protein_coding MGP_WSBEiJ_T0046702.1 MGP_WSBEiJ_G0022999.1 mouse_genomes_project 17 38062414 38063061 - MGP_WSBEiJ_P0046702 protein_coding protein_coding MGP_WSBEiJ_T0047486.1 MGP_WSBEiJ_G0023273.1 mouse_genomes_project 17 73463712 73481745 - MGP_WSBEiJ_P0047486 Myl12b protein_coding protein_coding MGP_WSBEiJ_T0047487.1 MGP_WSBEiJ_G0023273.1 mouse_genomes_project 17 73464113 73465832 - Myl12b protein_coding retained_intron MGP_WSBEiJ_T0047488.1 MGP_WSBEiJ_G0023273.1 mouse_genomes_project 17 73466823 73481488 - Myl12b protein_coding retained_intron MGP_WSBEiJ_T0046727.1 MGP_WSBEiJ_G0023018.1 mouse_genomes_project 17 39303052 39308549 + MGP_WSBEiJ_P0046727 protein_coding protein_coding MGP_WSBEiJ_T0046728.1 MGP_WSBEiJ_G0023018.1 mouse_genomes_project 17 39303052 39308552 + MGP_WSBEiJ_P0046728 protein_coding protein_coding MGP_WSBEiJ_T0100668.1 MGP_WSBEiJ_G0039126.1 mouse_genomes_project 17 37754517 37755356 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046280.1 MGP_WSBEiJ_G0022888.1 mouse_genomes_project 17 34746474 34750549 - MGP_WSBEiJ_P0046280 Hspa1b protein_coding protein_coding MGP_WSBEiJ_T0006801.1 MGP_WSBEiJ_G0005603.1 mouse_genomes_project 17 13485898 13491758 + A930024N18Rik lincRNA lincRNA MGP_WSBEiJ_T0047771.1 MGP_WSBEiJ_G0023380.1 mouse_genomes_project 17 91853066 91901802 + MGP_WSBEiJ_P0047771 Foxn2 protein_coding protein_coding MGP_WSBEiJ_T0047772.1 MGP_WSBEiJ_G0023380.1 mouse_genomes_project 17 91853088 91870331 + MGP_WSBEiJ_P0047772 Foxn2 protein_coding protein_coding MGP_WSBEiJ_T0047773.1 MGP_WSBEiJ_G0023380.1 mouse_genomes_project 17 91853111 91890414 + Foxn2 protein_coding retained_intron MGP_WSBEiJ_T0047774.1 MGP_WSBEiJ_G0023380.1 mouse_genomes_project 17 91853128 91899451 + MGP_WSBEiJ_P0047774 Foxn2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100606.1 MGP_WSBEiJ_G0039064.1 mouse_genomes_project 17 16333437 18573429 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098005.1 MGP_WSBEiJ_G0036668.1 mouse_genomes_project 17 57401625 57401730 + Gm22654 snRNA snRNA MGP_WSBEiJ_T0045152.1 MGP_WSBEiJ_G0022629.1 mouse_genomes_project 17 23946628 23974853 + MGP_WSBEiJ_P0045152 Clcn7 protein_coding protein_coding MGP_WSBEiJ_T0045153.1 MGP_WSBEiJ_G0022629.1 mouse_genomes_project 17 23946702 23959287 + Clcn7 protein_coding retained_intron MGP_WSBEiJ_T0045154.1 MGP_WSBEiJ_G0022629.1 mouse_genomes_project 17 23949842 23974847 + MGP_WSBEiJ_P0045154 Clcn7 protein_coding protein_coding MGP_WSBEiJ_T0045155.1 MGP_WSBEiJ_G0022629.1 mouse_genomes_project 17 23958552 23963336 + MGP_WSBEiJ_P0045155 Clcn7 protein_coding protein_coding MGP_WSBEiJ_T0045156.1 MGP_WSBEiJ_G0022629.1 mouse_genomes_project 17 23959059 23965150 + Clcn7 protein_coding processed_transcript MGP_WSBEiJ_T0045157.1 MGP_WSBEiJ_G0022629.1 mouse_genomes_project 17 23963923 23970678 + MGP_WSBEiJ_P0045157 Clcn7 protein_coding protein_coding MGP_WSBEiJ_T0045158.1 MGP_WSBEiJ_G0022629.1 mouse_genomes_project 17 23971428 23972491 + Clcn7 protein_coding retained_intron MGP_WSBEiJ_T0098002.1 MGP_WSBEiJ_G0036665.1 mouse_genomes_project 17 49162185 49162355 - Gm25201 snRNA snRNA MGP_WSBEiJ_T0012912.1 MGP_WSBEiJ_G0011042.1 mouse_genomes_project 17 13689106 13689364 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099241.1 MGP_WSBEiJ_G0037904.1 mouse_genomes_project 17 34958600 34958734 - Gm23442 snoRNA snoRNA MGP_WSBEiJ_T0047756.1 MGP_WSBEiJ_G0023373.1 mouse_genomes_project 17 90740461 90753256 - MGP_WSBEiJ_P0047756 Calm2 protein_coding protein_coding MGP_WSBEiJ_T0047757.1 MGP_WSBEiJ_G0023373.1 mouse_genomes_project 17 90741887 90753310 - Calm2 protein_coding retained_intron MGP_WSBEiJ_T0045738.1 MGP_WSBEiJ_G0022761.1 mouse_genomes_project 17 29320803 29472694 + MGP_WSBEiJ_P0045738 Zfand3 protein_coding protein_coding MGP_WSBEiJ_T0045861.1 MGP_WSBEiJ_G0022793.1 mouse_genomes_project 17 31876389 31901608 + MGP_WSBEiJ_P0045861 Cyp4f39 protein_coding protein_coding MGP_WSBEiJ_T0047595.1 MGP_WSBEiJ_G0023305.1 mouse_genomes_project 17 78278764 78293430 - MGP_WSBEiJ_P0047595 Fam98a protein_coding protein_coding MGP_WSBEiJ_T0047596.1 MGP_WSBEiJ_G0023305.1 mouse_genomes_project 17 78280709 78282253 - Fam98a protein_coding retained_intron MGP_WSBEiJ_T0047597.1 MGP_WSBEiJ_G0023305.1 mouse_genomes_project 17 78286148 78293280 - Fam98a protein_coding retained_intron MGP_WSBEiJ_T0045962.1 MGP_WSBEiJ_G0022824.1 mouse_genomes_project 17 33335293 33349291 + MGP_WSBEiJ_P0045962 Kank3 protein_coding protein_coding MGP_WSBEiJ_T0045963.1 MGP_WSBEiJ_G0022824.1 mouse_genomes_project 17 33335299 33348532 + Kank3 protein_coding retained_intron MGP_WSBEiJ_T0045964.1 MGP_WSBEiJ_G0022824.1 mouse_genomes_project 17 33335309 33349299 + MGP_WSBEiJ_P0045964 Kank3 protein_coding protein_coding MGP_WSBEiJ_T0045966.1 MGP_WSBEiJ_G0022824.1 mouse_genomes_project 17 33348202 33348649 + Kank3 protein_coding retained_intron MGP_WSBEiJ_T0045967.1 MGP_WSBEiJ_G0022824.1 mouse_genomes_project 17 33348516 33349291 + MGP_WSBEiJ_P0045967 Kank3 protein_coding protein_coding MGP_WSBEiJ_T0046406.1 MGP_WSBEiJ_G0022917.1 mouse_genomes_project 17 35029735 35045428 - MGP_WSBEiJ_P0046406 Nfkbil1 protein_coding protein_coding MGP_WSBEiJ_T0046408.1 MGP_WSBEiJ_G0022917.1 mouse_genomes_project 17 35030395 35031216 - Nfkbil1 protein_coding processed_transcript MGP_WSBEiJ_T0045869.1 MGP_WSBEiJ_G0022798.1 mouse_genomes_project 17 32244592 32264265 - MGP_WSBEiJ_P0045869 Zfp871 protein_coding protein_coding MGP_WSBEiJ_T0045870.1 MGP_WSBEiJ_G0022798.1 mouse_genomes_project 17 32250808 32264375 - Zfp871 protein_coding processed_transcript MGP_WSBEiJ_T0044506.1 MGP_WSBEiJ_G0022411.1 mouse_genomes_project 17 3240848 3248481 + MGP_WSBEiJ_P0044506 Gtf2h5 protein_coding protein_coding MGP_WSBEiJ_T0044507.1 MGP_WSBEiJ_G0022411.1 mouse_genomes_project 17 3240899 3243385 + Gtf2h5 protein_coding retained_intron MGP_WSBEiJ_T0044508.1 MGP_WSBEiJ_G0022411.1 mouse_genomes_project 17 3240992 3247095 + MGP_WSBEiJ_P0044508 Gtf2h5 protein_coding protein_coding MGP_WSBEiJ_T0006811.1 MGP_WSBEiJ_G0005611.1 mouse_genomes_project 17 22482968 22486642 + D930048G16Rik lincRNA lincRNA MGP_WSBEiJ_T0044546.1 MGP_WSBEiJ_G0022424.1 mouse_genomes_project 17 5395519 5399246 + MGP_WSBEiJ_P0044546 protein_coding protein_coding MGP_WSBEiJ_T0100672.1 MGP_WSBEiJ_G0039130.1 mouse_genomes_project 17 37808965 37809522 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0044538.1 MGP_WSBEiJ_G0022420.1 mouse_genomes_project 17 4684231 4706599 + MGP_WSBEiJ_P0044538 protein_coding protein_coding MGP_WSBEiJ_T0047455.1 MGP_WSBEiJ_G0023268.1 mouse_genomes_project 17 71780549 71789668 + MGP_WSBEiJ_P0047455 Zbtb14 protein_coding protein_coding MGP_WSBEiJ_T0047556.1 MGP_WSBEiJ_G0023297.1 mouse_genomes_project 17 77026192 77079002 + MGP_WSBEiJ_P0047556 Spast protein_coding protein_coding MGP_WSBEiJ_T0047557.1 MGP_WSBEiJ_G0023297.1 mouse_genomes_project 17 77026242 77079003 + MGP_WSBEiJ_P0047557 Spast protein_coding unknown_likely_coding MGP_WSBEiJ_T0046279.1 MGP_WSBEiJ_G0022887.1 mouse_genomes_project 17 34746309 34752877 - MGP_WSBEiJ_P0046279 protein_coding protein_coding MGP_WSBEiJ_T0045863.1 MGP_WSBEiJ_G0022795.1 mouse_genomes_project 17 31969556 31975305 + protein_coding retained_intron MGP_WSBEiJ_T0046122.1 MGP_WSBEiJ_G0022859.1 mouse_genomes_project 17 33984843 33993341 + MGP_WSBEiJ_P0046122 Btnl1 protein_coding protein_coding MGP_WSBEiJ_T0047473.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73318699 73325692 - MGP_WSBEiJ_P0047473 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047474.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73318699 73324286 - MGP_WSBEiJ_P0047474 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047475.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73318705 73326203 - MGP_WSBEiJ_P0047475 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047476.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73318705 73325554 - MGP_WSBEiJ_P0047476 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047477.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73318705 73327999 - MGP_WSBEiJ_P0047477 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047478.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73319222 73324286 - MGP_WSBEiJ_P0047478 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047479.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73319363 73320821 - MGP_WSBEiJ_P0047479 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047480.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73319475 73321665 - MGP_WSBEiJ_P0047480 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047481.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73320675 73324140 - MGP_WSBEiJ_P0047481 Tgif1 protein_coding protein_coding MGP_WSBEiJ_T0047482.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73320789 73325616 - Tgif1 protein_coding processed_transcript MGP_WSBEiJ_T0047483.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73321164 73324310 - Tgif1 protein_coding retained_intron MGP_WSBEiJ_T0047484.1 MGP_WSBEiJ_G0023271.1 mouse_genomes_project 17 73322869 73324303 - Tgif1 protein_coding processed_transcript MGP_WSBEiJ_T0006893.1 MGP_WSBEiJ_G0005672.1 mouse_genomes_project 17 91525704 91539704 - Gm26612 lincRNA lincRNA MGP_WSBEiJ_T0046307.1 MGP_WSBEiJ_G0022893.1 mouse_genomes_project 17 34797313 34807465 + MGP_WSBEiJ_P0046307 Vwa7 protein_coding protein_coding MGP_WSBEiJ_T0046308.1 MGP_WSBEiJ_G0022893.1 mouse_genomes_project 17 34797372 34807239 + MGP_WSBEiJ_P0046308 Vwa7 protein_coding protein_coding MGP_WSBEiJ_T0044658.1 MGP_WSBEiJ_G0022459.1 mouse_genomes_project 17 10906883 10934693 - MGP_WSBEiJ_P0044658 protein_coding protein_coding MGP_WSBEiJ_T0044659.1 MGP_WSBEiJ_G0022459.1 mouse_genomes_project 17 10906886 10934455 - MGP_WSBEiJ_P0044659 protein_coding protein_coding MGP_WSBEiJ_T0044660.1 MGP_WSBEiJ_G0022459.1 mouse_genomes_project 17 10922229 10927835 - MGP_WSBEiJ_P0044660 protein_coding protein_coding MGP_WSBEiJ_T0044661.1 MGP_WSBEiJ_G0022459.1 mouse_genomes_project 17 10923018 10925566 - protein_coding processed_transcript MGP_WSBEiJ_T0045367.1 MGP_WSBEiJ_G0022680.1 mouse_genomes_project 17 24993807 24996902 + MGP_WSBEiJ_P0045367 Mrpl28 protein_coding protein_coding MGP_WSBEiJ_T0045368.1 MGP_WSBEiJ_G0022680.1 mouse_genomes_project 17 24994006 24995219 + Mrpl28 protein_coding retained_intron MGP_WSBEiJ_T0047215.1 MGP_WSBEiJ_G0023174.1 mouse_genomes_project 17 57700815 57709627 + MGP_WSBEiJ_P0047215 Ccdc94 protein_coding protein_coding MGP_WSBEiJ_T0046048.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33595589 33602326 + MGP_WSBEiJ_P0046048 Rxrb protein_coding protein_coding MGP_WSBEiJ_T0046049.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33595960 33601634 + MGP_WSBEiJ_P0046049 Rxrb protein_coding protein_coding MGP_WSBEiJ_T0046050.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33595973 33597977 + MGP_WSBEiJ_P0046050 Rxrb protein_coding protein_coding MGP_WSBEiJ_T0046051.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33596152 33601749 + MGP_WSBEiJ_P0046051 Rxrb protein_coding protein_coding MGP_WSBEiJ_T0046052.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33596178 33602326 + MGP_WSBEiJ_P0046052 Rxrb protein_coding protein_coding MGP_WSBEiJ_T0046053.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33597329 33599945 + Rxrb protein_coding retained_intron MGP_WSBEiJ_T0046054.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33597682 33600308 + Rxrb protein_coding retained_intron MGP_WSBEiJ_T0046055.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33600257 33601208 + Rxrb protein_coding retained_intron MGP_WSBEiJ_T0046056.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33600301 33601241 + Rxrb protein_coding retained_intron MGP_WSBEiJ_T0046057.1 MGP_WSBEiJ_G0022841.1 mouse_genomes_project 17 33600397 33601468 + Rxrb protein_coding retained_intron MGP_WSBEiJ_T0012966.1 MGP_WSBEiJ_G0011096.1 mouse_genomes_project 17 72805602 72806046 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100040.1 MGP_WSBEiJ_G0038667.1 mouse_genomes_project 17 91505108 91510591 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100041.1 MGP_WSBEiJ_G0038667.1 mouse_genomes_project 17 91510299 91510698 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0047253.1 MGP_WSBEiJ_G0023192.1 mouse_genomes_project 17 58027602 58035019 - MGP_WSBEiJ_P0047253 Ticam1 protein_coding protein_coding MGP_WSBEiJ_T0046779.1 MGP_WSBEiJ_G0023050.1 mouse_genomes_project 17 44654298 44679673 - MGP_WSBEiJ_P0046779 Slc25a27 protein_coding protein_coding MGP_WSBEiJ_T0100630.1 MGP_WSBEiJ_G0039088.1 mouse_genomes_project 17 33390525 33393452 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047378.1 MGP_WSBEiJ_G0023244.1 mouse_genomes_project 17 66415790 66471143 - MGP_WSBEiJ_P0047378 Pja2 protein_coding protein_coding MGP_WSBEiJ_T0047379.1 MGP_WSBEiJ_G0023244.1 mouse_genomes_project 17 66415791 66451761 - MGP_WSBEiJ_P0047379 Pja2 protein_coding protein_coding MGP_WSBEiJ_T0047380.1 MGP_WSBEiJ_G0023244.1 mouse_genomes_project 17 66415791 66451761 - MGP_WSBEiJ_P0047380 Pja2 protein_coding protein_coding MGP_WSBEiJ_T0047381.1 MGP_WSBEiJ_G0023244.1 mouse_genomes_project 17 66415805 66471092 - MGP_WSBEiJ_P0047381 Pja2 protein_coding protein_coding MGP_WSBEiJ_T0045741.1 MGP_WSBEiJ_G0022763.1 mouse_genomes_project 17 29865975 29888318 - MGP_WSBEiJ_P0045741 Glo1 protein_coding protein_coding MGP_WSBEiJ_T0046741.1 MGP_WSBEiJ_G0023031.1 mouse_genomes_project 17 41631863 41637048 + MGP_WSBEiJ_P0046741 Esp1 protein_coding protein_coding MGP_WSBEiJ_T0044782.1 MGP_WSBEiJ_G0022508.1 mouse_genomes_project 17 18708890 18727585 - MGP_WSBEiJ_P0044782 protein_coding protein_coding MGP_WSBEiJ_T0046335.1 MGP_WSBEiJ_G0022900.1 mouse_genomes_project 17 34858031 34861089 - MGP_WSBEiJ_P0046335 Ly6g6d protein_coding protein_coding MGP_WSBEiJ_T0046336.1 MGP_WSBEiJ_G0022900.1 mouse_genomes_project 17 34858065 34864653 - Ly6g6d protein_coding processed_transcript MGP_WSBEiJ_T0046337.1 MGP_WSBEiJ_G0022900.1 mouse_genomes_project 17 34858133 34861053 - Ly6g6d protein_coding retained_intron MGP_WSBEiJ_T0046338.1 MGP_WSBEiJ_G0022900.1 mouse_genomes_project 17 34860503 34864653 - Ly6g6d protein_coding retained_intron MGP_WSBEiJ_T0046339.1 MGP_WSBEiJ_G0022900.1 mouse_genomes_project 17 34860801 34864644 - Ly6g6d protein_coding processed_transcript MGP_WSBEiJ_T0045751.1 MGP_WSBEiJ_G0022770.1 mouse_genomes_project 17 30469674 30473332 - MGP_WSBEiJ_P0045751 Tff1 protein_coding protein_coding MGP_WSBEiJ_T0044890.1 MGP_WSBEiJ_G0022561.1 mouse_genomes_project 17 22415053 22425455 + MGP_WSBEiJ_P0044890 Pkmyt1 protein_coding protein_coding MGP_WSBEiJ_T0045806.1 MGP_WSBEiJ_G0022780.1 mouse_genomes_project 17 30997896 31012227 - MGP_WSBEiJ_P0045806 U2af1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0100232.1 MGP_WSBEiJ_G0038778.1 mouse_genomes_project 17 11172819 11535111 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100233.1 MGP_WSBEiJ_G0038778.1 mouse_genomes_project 17 11532098 11534335 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0097988.1 MGP_WSBEiJ_G0036651.1 mouse_genomes_project 17 24537542 24537651 - Gm22645 snRNA snRNA MGP_WSBEiJ_T0006846.1 MGP_WSBEiJ_G0005640.1 mouse_genomes_project 17 35740650 35748856 + 4833427F10Rik lincRNA lincRNA MGP_WSBEiJ_T0044778.1 MGP_WSBEiJ_G0022504.1 mouse_genomes_project 17 18184330 18231990 + MGP_WSBEiJ_P0044778 Vmn2r103 protein_coding protein_coding MGP_WSBEiJ_T0012950.1 MGP_WSBEiJ_G0011080.1 mouse_genomes_project 17 49267214 49267571 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100617.1 MGP_WSBEiJ_G0039075.1 mouse_genomes_project 17 18857091 18857842 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0097984.1 MGP_WSBEiJ_G0036647.1 mouse_genomes_project 17 11688084 11688191 + Gm24867 snRNA snRNA MGP_WSBEiJ_T0047252.1 MGP_WSBEiJ_G0023191.1 mouse_genomes_project 17 58014211 58016903 + MGP_WSBEiJ_P0047252 protein_coding protein_coding MGP_WSBEiJ_T0047441.1 MGP_WSBEiJ_G0023263.1 mouse_genomes_project 17 70014395 70146316 + MGP_WSBEiJ_P0047441 Lama1 protein_coding protein_coding MGP_WSBEiJ_T0012980.1 MGP_WSBEiJ_G0011110.1 mouse_genomes_project 17 95185255 95187405 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003712.1 MGP_WSBEiJ_G0003339.1 mouse_genomes_project 17 88799111 88802165 - antisense antisense MGP_WSBEiJ_T0044779.1 MGP_WSBEiJ_G0022505.1 mouse_genomes_project 17 18541823 18543617 - MGP_WSBEiJ_P0044779 protein_coding protein_coding MGP_WSBEiJ_T0046332.1 MGP_WSBEiJ_G0022899.1 mouse_genomes_project 17 34851988 34856207 + MGP_WSBEiJ_P0046332 Ly6g6c protein_coding protein_coding MGP_WSBEiJ_T0046333.1 MGP_WSBEiJ_G0022899.1 mouse_genomes_project 17 34853907 34856632 + MGP_WSBEiJ_P0046333 Ly6g6c protein_coding protein_coding MGP_WSBEiJ_T0046334.1 MGP_WSBEiJ_G0022899.1 mouse_genomes_project 17 34853972 34856116 + MGP_WSBEiJ_P0046334 Ly6g6c protein_coding protein_coding MGP_WSBEiJ_T0045665.1 MGP_WSBEiJ_G0022745.1 mouse_genomes_project 17 28306061 28322259 + MGP_WSBEiJ_P0045665 Rab44 protein_coding protein_coding MGP_WSBEiJ_T0045666.1 MGP_WSBEiJ_G0022745.1 mouse_genomes_project 17 28307343 28321522 + Rab44 protein_coding processed_transcript MGP_WSBEiJ_T0047360.1 MGP_WSBEiJ_G0023236.1 mouse_genomes_project 17 59550350 59550803 - MGP_WSBEiJ_P0047360 Gm21834 protein_coding protein_coding MGP_WSBEiJ_T0046784.1 MGP_WSBEiJ_G0023053.1 mouse_genomes_project 17 45112722 45120410 + MGP_WSBEiJ_P0046784 Enpp5 protein_coding protein_coding MGP_WSBEiJ_T0046785.1 MGP_WSBEiJ_G0023053.1 mouse_genomes_project 17 45112754 45120402 + MGP_WSBEiJ_P0046785 Enpp5 protein_coding protein_coding MGP_WSBEiJ_T0046786.1 MGP_WSBEiJ_G0023053.1 mouse_genomes_project 17 45112788 45120410 + MGP_WSBEiJ_P0046786 Enpp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010026.1 MGP_WSBEiJ_G0008183.1 mouse_genomes_project 17 26072469 26072536 + Mir7677 miRNA miRNA MGP_WSBEiJ_T0046950.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47665644 47666141 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0046951.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47665677 47718050 - MGP_WSBEiJ_P0046951 Cul9 protein_coding protein_coding MGP_WSBEiJ_T0046952.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47665682 47684697 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0046953.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47665688 47717963 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0046954.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47666865 47689541 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0046955.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47682429 47686669 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0046956.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47683491 47684603 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0046957.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47683491 47688899 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0046958.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47693913 47705459 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0046959.1 MGP_WSBEiJ_G0023091.1 mouse_genomes_project 17 47695131 47705719 - Cul9 protein_coding retained_intron MGP_WSBEiJ_T0047270.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58338372 58341925 - MGP_WSBEiJ_P0047270 protein_coding protein_coding MGP_WSBEiJ_T0047271.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58338380 58341976 - MGP_WSBEiJ_P0047271 protein_coding protein_coding MGP_WSBEiJ_T0047272.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58340347 58362026 - MGP_WSBEiJ_P0047272 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047273.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58340347 58344424 - MGP_WSBEiJ_P0047273 protein_coding protein_coding MGP_WSBEiJ_T0047274.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58340347 58362099 - MGP_WSBEiJ_P0047274 protein_coding protein_coding MGP_WSBEiJ_T0047275.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58340357 58349899 - protein_coding processed_transcript MGP_WSBEiJ_T0047276.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58340713 58344427 - MGP_WSBEiJ_P0047276 protein_coding protein_coding MGP_WSBEiJ_T0047277.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58343405 58348843 - MGP_WSBEiJ_P0047277 protein_coding protein_coding MGP_WSBEiJ_T0047278.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58344941 58346841 - protein_coding retained_intron MGP_WSBEiJ_T0047279.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58346301 58352498 - protein_coding retained_intron MGP_WSBEiJ_T0047280.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58346397 58362038 - MGP_WSBEiJ_P0047280 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047281.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58347485 58352920 - protein_coding retained_intron MGP_WSBEiJ_T0047282.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58348430 58349082 - protein_coding retained_intron MGP_WSBEiJ_T0047283.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58348672 58362076 - MGP_WSBEiJ_P0047283 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047284.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58353845 58360559 - protein_coding retained_intron MGP_WSBEiJ_T0047285.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58353974 58361815 - protein_coding retained_intron MGP_WSBEiJ_T0047286.1 MGP_WSBEiJ_G0023199.1 mouse_genomes_project 17 58356379 58362025 - protein_coding retained_intron MGP_WSBEiJ_T0047357.1 MGP_WSBEiJ_G0023234.1 mouse_genomes_project 17 59226769 59328337 + MGP_WSBEiJ_P0047357 Adgre1 protein_coding protein_coding MGP_WSBEiJ_T0047358.1 MGP_WSBEiJ_G0023234.1 mouse_genomes_project 17 59226797 59328331 + MGP_WSBEiJ_P0047358 Adgre1 protein_coding protein_coding MGP_WSBEiJ_T0045322.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24734378 24776737 - MGP_WSBEiJ_P0045322 Rab40c protein_coding protein_coding MGP_WSBEiJ_T0045323.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24734378 24776727 - MGP_WSBEiJ_P0045323 Rab40c protein_coding protein_coding MGP_WSBEiJ_T0045324.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24734378 24776799 - MGP_WSBEiJ_P0045324 Rab40c protein_coding protein_coding MGP_WSBEiJ_T0045325.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24734378 24776641 - MGP_WSBEiJ_P0045325 Rab40c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045326.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24734381 24770710 - Rab40c protein_coding processed_transcript MGP_WSBEiJ_T0045327.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24735892 24776591 - MGP_WSBEiJ_P0045327 Rab40c protein_coding protein_coding MGP_WSBEiJ_T0045328.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24735903 24776812 - MGP_WSBEiJ_P0045328 Rab40c protein_coding protein_coding MGP_WSBEiJ_T0045329.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24737027 24776775 - Rab40c protein_coding processed_transcript MGP_WSBEiJ_T0045330.1 MGP_WSBEiJ_G0022670.1 mouse_genomes_project 17 24737346 24776796 - MGP_WSBEiJ_P0045330 Rab40c protein_coding protein_coding MGP_WSBEiJ_T0045062.1 MGP_WSBEiJ_G0022609.1 mouse_genomes_project 17 23522135 23522725 - Ndufb10 protein_coding retained_intron MGP_WSBEiJ_T0045063.1 MGP_WSBEiJ_G0022609.1 mouse_genomes_project 17 23522135 23522982 - Ndufb10 protein_coding retained_intron MGP_WSBEiJ_T0045064.1 MGP_WSBEiJ_G0022609.1 mouse_genomes_project 17 23522135 23524503 - Ndufb10 protein_coding retained_intron MGP_WSBEiJ_T0045065.1 MGP_WSBEiJ_G0022609.1 mouse_genomes_project 17 23522135 23524561 - MGP_WSBEiJ_P0045065 Ndufb10 protein_coding protein_coding MGP_WSBEiJ_T0045066.1 MGP_WSBEiJ_G0022609.1 mouse_genomes_project 17 23522480 23524495 - MGP_WSBEiJ_P0045066 Ndufb10 protein_coding protein_coding MGP_WSBEiJ_T0045067.1 MGP_WSBEiJ_G0022609.1 mouse_genomes_project 17 23522757 23524477 - Ndufb10 protein_coding processed_transcript MGP_WSBEiJ_T0047340.1 MGP_WSBEiJ_G0023225.1 mouse_genomes_project 17 58914277 58923374 - MGP_WSBEiJ_P0047340 Tubb4a protein_coding protein_coding MGP_WSBEiJ_T0047660.1 MGP_WSBEiJ_G0023337.1 mouse_genomes_project 17 83868359 83893583 + MGP_WSBEiJ_P0047660 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0012942.1 MGP_WSBEiJ_G0011072.1 mouse_genomes_project 17 38351922 38353701 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045314.1 MGP_WSBEiJ_G0022667.1 mouse_genomes_project 17 24714053 24719078 - MGP_WSBEiJ_P0045314 Fam195a protein_coding protein_coding MGP_WSBEiJ_T0046135.1 MGP_WSBEiJ_G0022862.1 mouse_genomes_project 17 34174314 34182711 - MGP_WSBEiJ_P0046135 protein_coding protein_coding MGP_WSBEiJ_T0047422.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68575817 68697516 - MGP_WSBEiJ_P0047422 Mtcl1 protein_coding protein_coding MGP_WSBEiJ_T0047423.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68575821 68697516 - MGP_WSBEiJ_P0047423 Mtcl1 protein_coding protein_coding MGP_WSBEiJ_T0047424.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68575823 68626751 - MGP_WSBEiJ_P0047424 Mtcl1 protein_coding protein_coding MGP_WSBEiJ_T0047425.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68576513 68685612 - MGP_WSBEiJ_P0047425 Mtcl1 protein_coding protein_coding MGP_WSBEiJ_T0047426.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68582765 68585355 - Mtcl1 protein_coding retained_intron MGP_WSBEiJ_T0047427.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68586775 68619977 - Mtcl1 protein_coding retained_intron MGP_WSBEiJ_T0047428.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68593216 68603047 - Mtcl1 protein_coding processed_transcript MGP_WSBEiJ_T0047429.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68593381 68619486 - Mtcl1 protein_coding processed_transcript MGP_WSBEiJ_T0047430.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68597047 68619100 - Mtcl1 protein_coding retained_intron MGP_WSBEiJ_T0047431.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68606532 68615707 - Mtcl1 protein_coding processed_transcript MGP_WSBEiJ_T0047432.1 MGP_WSBEiJ_G0023258.1 mouse_genomes_project 17 68626556 68696135 - Mtcl1 protein_coding retained_intron MGP_WSBEiJ_T0011231.1 MGP_WSBEiJ_G0009388.1 mouse_genomes_project 17 63244889 63245185 + Gm23773 misc_RNA misc_RNA MGP_WSBEiJ_T0045533.1 MGP_WSBEiJ_G0022720.1 mouse_genomes_project 17 27215959 27251268 + MGP_WSBEiJ_P0045533 Scube3 protein_coding protein_coding MGP_WSBEiJ_T0045534.1 MGP_WSBEiJ_G0022720.1 mouse_genomes_project 17 27227150 27247930 + Scube3 protein_coding processed_transcript MGP_WSBEiJ_T0045535.1 MGP_WSBEiJ_G0022720.1 mouse_genomes_project 17 27228307 27246561 + MGP_WSBEiJ_P0045535 Scube3 protein_coding protein_coding MGP_WSBEiJ_T0045536.1 MGP_WSBEiJ_G0022720.1 mouse_genomes_project 17 27237180 27249443 + Scube3 protein_coding processed_transcript MGP_WSBEiJ_T0045537.1 MGP_WSBEiJ_G0022720.1 mouse_genomes_project 17 27242224 27244064 + Scube3 protein_coding retained_intron MGP_WSBEiJ_T0045352.1 MGP_WSBEiJ_G0022676.1 mouse_genomes_project 17 24850275 24881825 - MGP_WSBEiJ_P0045352 Rab11fip3 protein_coding protein_coding MGP_WSBEiJ_T0045353.1 MGP_WSBEiJ_G0022676.1 mouse_genomes_project 17 24850275 24936245 - MGP_WSBEiJ_P0045353 Rab11fip3 protein_coding protein_coding MGP_WSBEiJ_T0045354.1 MGP_WSBEiJ_G0022676.1 mouse_genomes_project 17 24850284 24936477 - MGP_WSBEiJ_P0045354 Rab11fip3 protein_coding protein_coding MGP_WSBEiJ_T0045355.1 MGP_WSBEiJ_G0022676.1 mouse_genomes_project 17 24863812 24881783 - Rab11fip3 protein_coding retained_intron MGP_WSBEiJ_T0045356.1 MGP_WSBEiJ_G0022676.1 mouse_genomes_project 17 24873807 24878445 - MGP_WSBEiJ_P0045356 Rab11fip3 protein_coding protein_coding MGP_WSBEiJ_T0045357.1 MGP_WSBEiJ_G0022676.1 mouse_genomes_project 17 24898731 24936303 - Rab11fip3 protein_coding processed_transcript MGP_WSBEiJ_T0047599.1 MGP_WSBEiJ_G0023307.1 mouse_genomes_project 17 81176893 81218509 - MGP_WSBEiJ_P0047599 Fez2 protein_coding protein_coding MGP_WSBEiJ_T0047600.1 MGP_WSBEiJ_G0023307.1 mouse_genomes_project 17 81176893 81218509 - MGP_WSBEiJ_P0047600 Fez2 protein_coding protein_coding MGP_WSBEiJ_T0046938.1 MGP_WSBEiJ_G0023086.1 mouse_genomes_project 17 47587717 47590564 + MGP_WSBEiJ_P0046938 Crip3 protein_coding protein_coding MGP_WSBEiJ_T0046939.1 MGP_WSBEiJ_G0023086.1 mouse_genomes_project 17 47587733 47590365 + Crip3 protein_coding retained_intron MGP_WSBEiJ_T0046940.1 MGP_WSBEiJ_G0023086.1 mouse_genomes_project 17 47587733 47590559 + MGP_WSBEiJ_P0046940 Crip3 protein_coding protein_coding MGP_WSBEiJ_T0046941.1 MGP_WSBEiJ_G0023086.1 mouse_genomes_project 17 47587742 47590203 + MGP_WSBEiJ_P0046941 Crip3 protein_coding protein_coding MGP_WSBEiJ_T0046942.1 MGP_WSBEiJ_G0023086.1 mouse_genomes_project 17 47587761 47589273 + Crip3 protein_coding processed_transcript MGP_WSBEiJ_T0046943.1 MGP_WSBEiJ_G0023086.1 mouse_genomes_project 17 47589462 47590510 + Crip3 protein_coding retained_intron MGP_WSBEiJ_T0046944.1 MGP_WSBEiJ_G0023086.1 mouse_genomes_project 17 47589752 47590485 + Crip3 protein_coding retained_intron MGP_WSBEiJ_T0012943.1 MGP_WSBEiJ_G0011073.1 mouse_genomes_project 17 38355929 38358385 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046853.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46767345 46795297 - MGP_WSBEiJ_P0046853 Tmem63b protein_coding protein_coding MGP_WSBEiJ_T0046854.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46770182 46772415 - Tmem63b protein_coding retained_intron MGP_WSBEiJ_T0046855.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46771274 46773666 - Tmem63b protein_coding retained_intron MGP_WSBEiJ_T0046856.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46774927 46795011 - MGP_WSBEiJ_P0046856 Tmem63b protein_coding protein_coding MGP_WSBEiJ_T0046857.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46777226 46795943 - MGP_WSBEiJ_P0046857 Tmem63b protein_coding protein_coding MGP_WSBEiJ_T0046858.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46780982 46789439 - MGP_WSBEiJ_P0046858 Tmem63b protein_coding protein_coding MGP_WSBEiJ_T0046859.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46781212 46795175 - MGP_WSBEiJ_P0046859 Tmem63b protein_coding protein_coding MGP_WSBEiJ_T0046860.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46787777 46795158 - MGP_WSBEiJ_P0046860 Tmem63b protein_coding protein_coding MGP_WSBEiJ_T0046861.1 MGP_WSBEiJ_G0023069.1 mouse_genomes_project 17 46795261 46795925 - Tmem63b protein_coding processed_transcript MGP_WSBEiJ_T0047317.1 MGP_WSBEiJ_G0023214.1 mouse_genomes_project 17 58706783 58751057 - MGP_WSBEiJ_P0047317 Mllt1 protein_coding protein_coding MGP_WSBEiJ_T0100677.1 MGP_WSBEiJ_G0039135.1 mouse_genomes_project 17 57578202 57578850 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100636.1 MGP_WSBEiJ_G0039094.1 mouse_genomes_project 17 34136151 34136306 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0099250.1 MGP_WSBEiJ_G0037913.1 mouse_genomes_project 17 67127194 67127326 - Gm25344 snoRNA snoRNA MGP_WSBEiJ_T0047690.1 MGP_WSBEiJ_G0023349.1 mouse_genomes_project 17 87640555 87757383 + MGP_WSBEiJ_P0047690 Plekhh2 protein_coding protein_coding MGP_WSBEiJ_T0047238.1 MGP_WSBEiJ_G0023182.1 mouse_genomes_project 17 57832136 57854595 + MGP_WSBEiJ_P0047238 Hdgfrp2 protein_coding protein_coding MGP_WSBEiJ_T0047239.1 MGP_WSBEiJ_G0023182.1 mouse_genomes_project 17 57832234 57854581 + MGP_WSBEiJ_P0047239 Hdgfrp2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045933.1 MGP_WSBEiJ_G0022819.1 mouse_genomes_project 17 33152588 33160233 + MGP_WSBEiJ_P0045933 Pram1 protein_coding protein_coding MGP_WSBEiJ_T0045934.1 MGP_WSBEiJ_G0022819.1 mouse_genomes_project 17 33152627 33160227 + MGP_WSBEiJ_P0045934 Pram1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045935.1 MGP_WSBEiJ_G0022819.1 mouse_genomes_project 17 33159343 33160165 + Pram1 protein_coding retained_intron MGP_WSBEiJ_T0044770.1 MGP_WSBEiJ_G0022496.1 mouse_genomes_project 17 16321754 16338494 + MGP_WSBEiJ_P0044770 protein_coding protein_coding MGP_WSBEiJ_T0046813.1 MGP_WSBEiJ_G0023063.1 mouse_genomes_project 17 46654176 46662698 + MGP_WSBEiJ_P0046813 Nfkbie protein_coding protein_coding MGP_WSBEiJ_T0006815.1 MGP_WSBEiJ_G0005615.1 mouse_genomes_project 17 25814840 25852631 + Gm20468 lincRNA lincRNA MGP_WSBEiJ_T0046685.1 MGP_WSBEiJ_G0022984.1 mouse_genomes_project 17 37618331 37622618 + MGP_WSBEiJ_P0046685 H2-M3 protein_coding protein_coding MGP_WSBEiJ_T0006883.1 MGP_WSBEiJ_G0005665.1 mouse_genomes_project 17 86085916 86087644 + Gm29052 lincRNA lincRNA MGP_WSBEiJ_T0046678.1 MGP_WSBEiJ_G0022977.1 mouse_genomes_project 17 37454887 37455795 - MGP_WSBEiJ_P0046678 protein_coding protein_coding MGP_WSBEiJ_T0100652.1 MGP_WSBEiJ_G0039110.1 mouse_genomes_project 17 36718793 36720557 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0016944.1 MGP_WSBEiJ_G0014754.1 mouse_genomes_project 17 6050562 6071707 - 4930506C21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016945.1 MGP_WSBEiJ_G0014754.1 mouse_genomes_project 17 6056076 6057664 - 4930506C21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016946.1 MGP_WSBEiJ_G0014754.1 mouse_genomes_project 17 6056922 6071735 - 4930506C21Rik processed_transcript retained_intron MGP_WSBEiJ_T0006850.1 MGP_WSBEiJ_G0005644.1 mouse_genomes_project 17 38228639 38230526 + Gm20524 lincRNA lincRNA MGP_WSBEiJ_T0046505.1 MGP_WSBEiJ_G0022939.1 mouse_genomes_project 17 35832564 35836489 + MGP_WSBEiJ_P0046505 Nrm protein_coding protein_coding MGP_WSBEiJ_T0046506.1 MGP_WSBEiJ_G0022939.1 mouse_genomes_project 17 35832584 35835750 + MGP_WSBEiJ_P0046506 Nrm protein_coding protein_coding MGP_WSBEiJ_T0046507.1 MGP_WSBEiJ_G0022939.1 mouse_genomes_project 17 35832732 35835690 + MGP_WSBEiJ_P0046507 Nrm protein_coding protein_coding MGP_WSBEiJ_T0046578.1 MGP_WSBEiJ_G0022948.1 mouse_genomes_project 17 35966340 35975807 + MGP_WSBEiJ_P0046578 Gnl1 protein_coding protein_coding MGP_WSBEiJ_T0046579.1 MGP_WSBEiJ_G0022948.1 mouse_genomes_project 17 35966657 35975767 + MGP_WSBEiJ_P0046579 Gnl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046580.1 MGP_WSBEiJ_G0022948.1 mouse_genomes_project 17 35966805 35967555 + Gnl1 protein_coding retained_intron MGP_WSBEiJ_T0100654.1 MGP_WSBEiJ_G0039112.1 mouse_genomes_project 17 36759920 36760146 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047677.1 MGP_WSBEiJ_G0023345.1 mouse_genomes_project 17 86641415 86692099 - MGP_WSBEiJ_P0047677 Kcng3 protein_coding protein_coding MGP_WSBEiJ_T0046815.1 MGP_WSBEiJ_G0023065.1 mouse_genomes_project 17 46667131 46672638 - MGP_WSBEiJ_P0046815 Hsp90ab1 protein_coding protein_coding MGP_WSBEiJ_T0046816.1 MGP_WSBEiJ_G0023065.1 mouse_genomes_project 17 46668214 46669093 - Hsp90ab1 protein_coding retained_intron MGP_WSBEiJ_T0046817.1 MGP_WSBEiJ_G0023065.1 mouse_genomes_project 17 46668374 46672620 - MGP_WSBEiJ_P0046817 Hsp90ab1 protein_coding protein_coding MGP_WSBEiJ_T0046818.1 MGP_WSBEiJ_G0023065.1 mouse_genomes_project 17 46668934 46672622 - MGP_WSBEiJ_P0046818 Hsp90ab1 protein_coding protein_coding MGP_WSBEiJ_T0046819.1 MGP_WSBEiJ_G0023065.1 mouse_genomes_project 17 46669801 46670939 - Hsp90ab1 protein_coding retained_intron MGP_WSBEiJ_T0046820.1 MGP_WSBEiJ_G0023065.1 mouse_genomes_project 17 46670019 46672622 - MGP_WSBEiJ_P0046820 Hsp90ab1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046821.1 MGP_WSBEiJ_G0023065.1 mouse_genomes_project 17 46670374 46672638 - Hsp90ab1 protein_coding retained_intron MGP_WSBEiJ_T0046822.1 MGP_WSBEiJ_G0023065.1 mouse_genomes_project 17 46670894 46671912 - MGP_WSBEiJ_P0046822 Hsp90ab1 protein_coding protein_coding MGP_WSBEiJ_T0100669.1 MGP_WSBEiJ_G0039127.1 mouse_genomes_project 17 37762650 37763577 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0003695.1 MGP_WSBEiJ_G0003326.1 mouse_genomes_project 17 46687955 46690198 + Gm17080 antisense antisense MGP_WSBEiJ_T0044548.1 MGP_WSBEiJ_G0022426.1 mouse_genomes_project 17 5426410 5462494 + MGP_WSBEiJ_P0044548 protein_coding protein_coding MGP_WSBEiJ_T0044549.1 MGP_WSBEiJ_G0022426.1 mouse_genomes_project 17 5426676 5462309 + MGP_WSBEiJ_P0044549 protein_coding unknown_likely_coding MGP_WSBEiJ_T0012961.1 MGP_WSBEiJ_G0011091.1 mouse_genomes_project 17 57759590 57759852 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003679.1 MGP_WSBEiJ_G0003313.1 mouse_genomes_project 17 34911238 34917553 - antisense antisense MGP_WSBEiJ_T0045350.1 MGP_WSBEiJ_G0022675.1 mouse_genomes_project 17 24817974 24846943 - MGP_WSBEiJ_P0045350 Capn15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045351.1 MGP_WSBEiJ_G0022675.1 mouse_genomes_project 17 24819186 24846931 - MGP_WSBEiJ_P0045351 Capn15 protein_coding protein_coding MGP_WSBEiJ_T0045164.1 MGP_WSBEiJ_G0022632.1 mouse_genomes_project 17 24002361 24057827 + MGP_WSBEiJ_P0045164 protein_coding protein_coding MGP_WSBEiJ_T0045165.1 MGP_WSBEiJ_G0022632.1 mouse_genomes_project 17 24002890 24057827 + MGP_WSBEiJ_P0045165 protein_coding protein_coding MGP_WSBEiJ_T0045166.1 MGP_WSBEiJ_G0022632.1 mouse_genomes_project 17 24003445 24019809 + MGP_WSBEiJ_P0045166 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045167.1 MGP_WSBEiJ_G0022632.1 mouse_genomes_project 17 24024743 24033463 + protein_coding retained_intron MGP_WSBEiJ_T0045168.1 MGP_WSBEiJ_G0022632.1 mouse_genomes_project 17 24045788 24052575 + MGP_WSBEiJ_P0045168 protein_coding protein_coding MGP_WSBEiJ_T0045169.1 MGP_WSBEiJ_G0022632.1 mouse_genomes_project 17 24045788 24057826 + MGP_WSBEiJ_P0045169 protein_coding protein_coding MGP_WSBEiJ_T0045171.1 MGP_WSBEiJ_G0022632.1 mouse_genomes_project 17 24045963 24055251 + MGP_WSBEiJ_P0045171 protein_coding protein_coding MGP_WSBEiJ_T0099254.1 MGP_WSBEiJ_G0037917.1 mouse_genomes_project 17 75824928 75825033 + Gm25406 snoRNA snoRNA MGP_WSBEiJ_T0100355.1 MGP_WSBEiJ_G0038833.1 mouse_genomes_project 17 41765880 41780539 + unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0045460.1 MGP_WSBEiJ_G0022701.1 mouse_genomes_project 17 25934691 26008780 + MGP_WSBEiJ_P0045460 Ggnbp1 protein_coding protein_coding MGP_WSBEiJ_T0045461.1 MGP_WSBEiJ_G0022701.1 mouse_genomes_project 17 25984592 25995626 + Ggnbp1 protein_coding retained_intron MGP_WSBEiJ_T0045462.1 MGP_WSBEiJ_G0022701.1 mouse_genomes_project 17 25984603 26008780 + MGP_WSBEiJ_P0045462 Ggnbp1 protein_coding protein_coding MGP_WSBEiJ_T0045463.1 MGP_WSBEiJ_G0022701.1 mouse_genomes_project 17 25984619 25990804 + Ggnbp1 protein_coding processed_transcript MGP_WSBEiJ_T0045467.1 MGP_WSBEiJ_G0022701.1 mouse_genomes_project 17 25998891 26008780 + MGP_WSBEiJ_P0045467 Ggnbp1 protein_coding protein_coding MGP_WSBEiJ_T0045468.1 MGP_WSBEiJ_G0022701.1 mouse_genomes_project 17 26000009 26007211 + Ggnbp1 protein_coding retained_intron MGP_WSBEiJ_T0100631.1 MGP_WSBEiJ_G0039089.1 mouse_genomes_project 17 33450014 33450391 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012921.1 MGP_WSBEiJ_G0011051.1 mouse_genomes_project 17 31321227 31321647 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044930.1 MGP_WSBEiJ_G0022577.1 mouse_genomes_project 17 22782905 22811792 - MGP_WSBEiJ_P0044930 Kctd5 protein_coding protein_coding MGP_WSBEiJ_T0044931.1 MGP_WSBEiJ_G0022577.1 mouse_genomes_project 17 22794285 22806598 - Kctd5 protein_coding processed_transcript MGP_WSBEiJ_T0046696.1 MGP_WSBEiJ_G0022993.1 mouse_genomes_project 17 37956919 38004247 - MGP_WSBEiJ_P0046696 protein_coding protein_coding MGP_WSBEiJ_T0047675.1 MGP_WSBEiJ_G0023344.1 mouse_genomes_project 17 86551328 86563529 - MGP_WSBEiJ_P0047675 Cox7a2l protein_coding protein_coding MGP_WSBEiJ_T0047676.1 MGP_WSBEiJ_G0023344.1 mouse_genomes_project 17 86551328 86563529 - MGP_WSBEiJ_P0047676 Cox7a2l protein_coding protein_coding MGP_WSBEiJ_T0098020.1 MGP_WSBEiJ_G0036683.1 mouse_genomes_project 17 91796742 91796849 - Gm23947 snRNA snRNA MGP_WSBEiJ_T0046978.1 MGP_WSBEiJ_G0023099.1 mouse_genomes_project 17 47866099 47869978 + MGP_WSBEiJ_P0046978 Mea1 protein_coding protein_coding MGP_WSBEiJ_T0045965.1 MGP_WSBEiJ_G0022825.1 mouse_genomes_project 17 33345402 33350866 - MGP_WSBEiJ_P0045965 Rps28 protein_coding protein_coding MGP_WSBEiJ_T0045968.1 MGP_WSBEiJ_G0022825.1 mouse_genomes_project 17 33349409 33350936 - MGP_WSBEiJ_P0045968 Rps28 protein_coding protein_coding MGP_WSBEiJ_T0045969.1 MGP_WSBEiJ_G0022825.1 mouse_genomes_project 17 33349410 33350717 - MGP_WSBEiJ_P0045969 Rps28 protein_coding protein_coding MGP_WSBEiJ_T0045970.1 MGP_WSBEiJ_G0022825.1 mouse_genomes_project 17 33349423 33350839 - Rps28 protein_coding processed_transcript MGP_WSBEiJ_T0045971.1 MGP_WSBEiJ_G0022825.1 mouse_genomes_project 17 33349423 33350936 - MGP_WSBEiJ_P0045971 Rps28 protein_coding protein_coding MGP_WSBEiJ_T0045972.1 MGP_WSBEiJ_G0022825.1 mouse_genomes_project 17 33349425 33350850 - MGP_WSBEiJ_P0045972 Rps28 protein_coding protein_coding MGP_WSBEiJ_T0045973.1 MGP_WSBEiJ_G0022825.1 mouse_genomes_project 17 33349959 33350858 - Rps28 protein_coding retained_intron MGP_WSBEiJ_T0046021.1 MGP_WSBEiJ_G0022834.1 mouse_genomes_project 17 33484884 33493807 + MGP_WSBEiJ_P0046021 Wdr46 protein_coding protein_coding MGP_WSBEiJ_T0046022.1 MGP_WSBEiJ_G0022834.1 mouse_genomes_project 17 33484941 33485685 + Wdr46 protein_coding retained_intron MGP_WSBEiJ_T0046023.1 MGP_WSBEiJ_G0022834.1 mouse_genomes_project 17 33485629 33487909 + Wdr46 protein_coding retained_intron MGP_WSBEiJ_T0006807.1 MGP_WSBEiJ_G0005609.1 mouse_genomes_project 17 22230066 22231611 + Gm26695 lincRNA lincRNA MGP_WSBEiJ_T0096989.1 MGP_WSBEiJ_G0035670.1 mouse_genomes_project 17 30362087 30362215 + Gm25447 rRNA rRNA MGP_WSBEiJ_T0044501.1 MGP_WSBEiJ_G0022410.1 mouse_genomes_project 17 3200310 3240804 - MGP_WSBEiJ_P0044501 Serac1 protein_coding protein_coding MGP_WSBEiJ_T0044502.1 MGP_WSBEiJ_G0022410.1 mouse_genomes_project 17 3201988 3208208 - Serac1 protein_coding processed_transcript MGP_WSBEiJ_T0044503.1 MGP_WSBEiJ_G0022410.1 mouse_genomes_project 17 3202150 3240790 - MGP_WSBEiJ_P0044503 Serac1 protein_coding protein_coding MGP_WSBEiJ_T0044504.1 MGP_WSBEiJ_G0022410.1 mouse_genomes_project 17 3208179 3209543 - Serac1 protein_coding retained_intron MGP_WSBEiJ_T0044505.1 MGP_WSBEiJ_G0022410.1 mouse_genomes_project 17 3226066 3240796 - Serac1 protein_coding processed_transcript MGP_WSBEiJ_T0045983.1 MGP_WSBEiJ_G0022827.1 mouse_genomes_project 17 33370852 33377398 + MGP_WSBEiJ_P0045983 Cd320 protein_coding protein_coding MGP_WSBEiJ_T0045984.1 MGP_WSBEiJ_G0022827.1 mouse_genomes_project 17 33370864 33374079 + Cd320 protein_coding retained_intron MGP_WSBEiJ_T0045985.1 MGP_WSBEiJ_G0022827.1 mouse_genomes_project 17 33371187 33376389 + MGP_WSBEiJ_P0045985 Cd320 protein_coding protein_coding MGP_WSBEiJ_T0046232.1 MGP_WSBEiJ_G0022879.1 mouse_genomes_project 17 34618080 34624069 + MGP_WSBEiJ_P0046232 Nelfe protein_coding protein_coding MGP_WSBEiJ_T0046233.1 MGP_WSBEiJ_G0022879.1 mouse_genomes_project 17 34618087 34623954 + MGP_WSBEiJ_P0046233 Nelfe protein_coding protein_coding MGP_WSBEiJ_T0046234.1 MGP_WSBEiJ_G0022879.1 mouse_genomes_project 17 34618097 34621783 + MGP_WSBEiJ_P0046234 Nelfe protein_coding protein_coding MGP_WSBEiJ_T0046235.1 MGP_WSBEiJ_G0022879.1 mouse_genomes_project 17 34618097 34624072 + MGP_WSBEiJ_P0046235 Nelfe protein_coding protein_coding MGP_WSBEiJ_T0046236.1 MGP_WSBEiJ_G0022879.1 mouse_genomes_project 17 34620292 34621539 + Nelfe protein_coding retained_intron MGP_WSBEiJ_T0046237.1 MGP_WSBEiJ_G0022879.1 mouse_genomes_project 17 34621605 34622220 + Nelfe protein_coding retained_intron MGP_WSBEiJ_T0046238.1 MGP_WSBEiJ_G0022879.1 mouse_genomes_project 17 34621949 34622448 + Nelfe protein_coding retained_intron MGP_WSBEiJ_T0016992.1 MGP_WSBEiJ_G0014773.1 mouse_genomes_project 17 48384166 48585919 + Trerf1 processed_transcript retained_intron MGP_WSBEiJ_T0016993.1 MGP_WSBEiJ_G0014773.1 mouse_genomes_project 17 48384232 48617423 + Trerf1 processed_transcript processed_transcript MGP_WSBEiJ_T0016994.1 MGP_WSBEiJ_G0014773.1 mouse_genomes_project 17 48384232 48619902 + Trerf1 processed_transcript processed_transcript MGP_WSBEiJ_T0016995.1 MGP_WSBEiJ_G0014773.1 mouse_genomes_project 17 48384506 48574585 + Trerf1 processed_transcript retained_intron MGP_WSBEiJ_T0016996.1 MGP_WSBEiJ_G0014773.1 mouse_genomes_project 17 48459965 48574585 + Trerf1 processed_transcript retained_intron MGP_WSBEiJ_T0016997.1 MGP_WSBEiJ_G0014773.1 mouse_genomes_project 17 48544772 48617428 + Trerf1 processed_transcript processed_transcript MGP_WSBEiJ_T0012900.1 MGP_WSBEiJ_G0011030.1 mouse_genomes_project 17 5268854 5269431 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047605.1 MGP_WSBEiJ_G0023311.1 mouse_genomes_project 17 81664618 81677218 + MGP_WSBEiJ_P0047605 Gpatch11 protein_coding protein_coding MGP_WSBEiJ_T0045681.1 MGP_WSBEiJ_G0022749.1 mouse_genomes_project 17 28503287 28515794 + Pi16 protein_coding retained_intron MGP_WSBEiJ_T0045682.1 MGP_WSBEiJ_G0022749.1 mouse_genomes_project 17 28503292 28516312 + MGP_WSBEiJ_P0045682 Pi16 protein_coding protein_coding MGP_WSBEiJ_T0045683.1 MGP_WSBEiJ_G0022749.1 mouse_genomes_project 17 28503607 28515801 + MGP_WSBEiJ_P0045683 Pi16 protein_coding protein_coding MGP_WSBEiJ_T0045684.1 MGP_WSBEiJ_G0022749.1 mouse_genomes_project 17 28503644 28515998 + MGP_WSBEiJ_P0045684 Pi16 protein_coding protein_coding MGP_WSBEiJ_T0012915.1 MGP_WSBEiJ_G0011045.1 mouse_genomes_project 17 21356523 21356941 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045041.1 MGP_WSBEiJ_G0022603.1 mouse_genomes_project 17 23477451 23483801 - MGP_WSBEiJ_P0045041 Syngr3 protein_coding protein_coding MGP_WSBEiJ_T0045042.1 MGP_WSBEiJ_G0022603.1 mouse_genomes_project 17 23478994 23482048 - Syngr3 protein_coding processed_transcript MGP_WSBEiJ_T0047663.1 MGP_WSBEiJ_G0023340.1 mouse_genomes_project 17 84359377 84639361 - MGP_WSBEiJ_P0047663 Slc8a1 protein_coding protein_coding MGP_WSBEiJ_T0047664.1 MGP_WSBEiJ_G0023340.1 mouse_genomes_project 17 84359377 84639361 - MGP_WSBEiJ_P0047664 Slc8a1 protein_coding protein_coding MGP_WSBEiJ_T0047665.1 MGP_WSBEiJ_G0023340.1 mouse_genomes_project 17 84359377 84639361 - MGP_WSBEiJ_P0047665 Slc8a1 protein_coding protein_coding MGP_WSBEiJ_T0047666.1 MGP_WSBEiJ_G0023340.1 mouse_genomes_project 17 84359377 84660740 - MGP_WSBEiJ_P0047666 Slc8a1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047081.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49134129 49153983 - MGP_WSBEiJ_P0047081 Mdfi protein_coding protein_coding MGP_WSBEiJ_T0047082.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49134129 49155243 - MGP_WSBEiJ_P0047082 Mdfi protein_coding protein_coding MGP_WSBEiJ_T0047083.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49134137 49154033 - MGP_WSBEiJ_P0047083 Mdfi protein_coding protein_coding MGP_WSBEiJ_T0047084.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49136103 49154000 - Mdfi protein_coding processed_transcript MGP_WSBEiJ_T0047085.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49136221 49153911 - MGP_WSBEiJ_P0047085 Mdfi protein_coding protein_coding MGP_WSBEiJ_T0047086.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49139934 49154003 - Mdfi protein_coding retained_intron MGP_WSBEiJ_T0047087.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49140973 49154014 - MGP_WSBEiJ_P0047087 Mdfi protein_coding protein_coding MGP_WSBEiJ_T0047088.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49141062 49153987 - MGP_WSBEiJ_P0047088 Mdfi protein_coding protein_coding MGP_WSBEiJ_T0047089.1 MGP_WSBEiJ_G0023130.1 mouse_genomes_project 17 49145630 49153972 - MGP_WSBEiJ_P0047089 Mdfi protein_coding protein_coding MGP_WSBEiJ_T0099256.1 MGP_WSBEiJ_G0037919.1 mouse_genomes_project 17 85234218 85234347 - Gm22386 snoRNA snoRNA MGP_WSBEiJ_T0012937.1 MGP_WSBEiJ_G0011067.1 mouse_genomes_project 17 37466089 37466686 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096799.1 MGP_WSBEiJ_G0035480.1 mouse_genomes_project 17 93926445 93927058 + pseudogene pseudogene MGP_WSBEiJ_T0044771.1 MGP_WSBEiJ_G0022497.1 mouse_genomes_project 17 16356959 16377932 + MGP_WSBEiJ_P0044771 protein_coding protein_coding MGP_WSBEiJ_T0010037.1 MGP_WSBEiJ_G0008194.1 mouse_genomes_project 17 33586055 33586165 - Mir219a-1 miRNA miRNA MGP_WSBEiJ_T0046474.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35646566 35666903 - MGP_WSBEiJ_P0046474 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046475.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35646566 35670749 - MGP_WSBEiJ_P0046475 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046476.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35646569 35670191 - MGP_WSBEiJ_P0046476 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046477.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35646569 35670289 - MGP_WSBEiJ_P0046477 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046478.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35646569 35668305 - MGP_WSBEiJ_P0046478 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046479.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35647430 35666845 - MGP_WSBEiJ_P0046479 Ddr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046480.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35650341 35668225 - MGP_WSBEiJ_P0046480 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046481.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35655077 35670127 - MGP_WSBEiJ_P0046481 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046482.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35655105 35670771 - MGP_WSBEiJ_P0046482 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046483.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35655205 35664264 - MGP_WSBEiJ_P0046483 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046484.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35657393 35668307 - MGP_WSBEiJ_P0046484 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0046485.1 MGP_WSBEiJ_G0022934.1 mouse_genomes_project 17 35659260 35668578 - MGP_WSBEiJ_P0046485 Ddr1 protein_coding protein_coding MGP_WSBEiJ_T0044740.1 MGP_WSBEiJ_G0022483.1 mouse_genomes_project 17 14923466 14925092 + MGP_WSBEiJ_P0044740 protein_coding protein_coding MGP_WSBEiJ_T0045639.1 MGP_WSBEiJ_G0022741.1 mouse_genomes_project 17 28112137 28124302 + MGP_WSBEiJ_P0045639 Kctd20 protein_coding protein_coding MGP_WSBEiJ_T0045640.1 MGP_WSBEiJ_G0022741.1 mouse_genomes_project 17 28112653 28128111 + MGP_WSBEiJ_P0045640 Kctd20 protein_coding protein_coding MGP_WSBEiJ_T0045641.1 MGP_WSBEiJ_G0022741.1 mouse_genomes_project 17 28112690 28127274 + Kctd20 protein_coding processed_transcript MGP_WSBEiJ_T0045642.1 MGP_WSBEiJ_G0022741.1 mouse_genomes_project 17 28112786 28128111 + MGP_WSBEiJ_P0045642 Kctd20 protein_coding protein_coding MGP_WSBEiJ_T0045643.1 MGP_WSBEiJ_G0022741.1 mouse_genomes_project 17 28112875 28125261 + MGP_WSBEiJ_P0045643 Kctd20 protein_coding protein_coding MGP_WSBEiJ_T0045644.1 MGP_WSBEiJ_G0022741.1 mouse_genomes_project 17 28113403 28128119 + MGP_WSBEiJ_P0045644 Kctd20 protein_coding protein_coding MGP_WSBEiJ_T0045645.1 MGP_WSBEiJ_G0022741.1 mouse_genomes_project 17 28113403 28128117 + MGP_WSBEiJ_P0045645 Kctd20 protein_coding protein_coding MGP_WSBEiJ_T0044892.1 MGP_WSBEiJ_G0022563.1 mouse_genomes_project 17 22429926 22434567 - MGP_WSBEiJ_P0044892 Kremen2 protein_coding protein_coding MGP_WSBEiJ_T0047119.1 MGP_WSBEiJ_G0023141.1 mouse_genomes_project 17 49749396 49756745 + MGP_WSBEiJ_P0047119 Treml1 protein_coding protein_coding MGP_WSBEiJ_T0047120.1 MGP_WSBEiJ_G0023141.1 mouse_genomes_project 17 49749417 49756487 + MGP_WSBEiJ_P0047120 Treml1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046742.1 MGP_WSBEiJ_G0023032.1 mouse_genomes_project 17 41676598 41709055 - MGP_WSBEiJ_P0046742 Crisp2 protein_coding protein_coding MGP_WSBEiJ_T0046743.1 MGP_WSBEiJ_G0023032.1 mouse_genomes_project 17 41696084 41709086 - MGP_WSBEiJ_P0046743 Crisp2 protein_coding protein_coding MGP_WSBEiJ_T0046744.1 MGP_WSBEiJ_G0023032.1 mouse_genomes_project 17 41697765 41709016 - MGP_WSBEiJ_P0046744 Crisp2 protein_coding protein_coding MGP_WSBEiJ_T0046745.1 MGP_WSBEiJ_G0023032.1 mouse_genomes_project 17 41697841 41709007 - MGP_WSBEiJ_P0046745 Crisp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046746.1 MGP_WSBEiJ_G0023032.1 mouse_genomes_project 17 41708195 41716308 - Crisp2 protein_coding processed_transcript MGP_WSBEiJ_T0010014.1 MGP_WSBEiJ_G0008171.1 mouse_genomes_project 17 22519526 22519605 + Mir5125 miRNA miRNA MGP_WSBEiJ_T0046069.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33685099 33694814 - MGP_WSBEiJ_P0046069 Brd2 protein_coding protein_coding MGP_WSBEiJ_T0046070.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33685099 33695385 - MGP_WSBEiJ_P0046070 Brd2 protein_coding protein_coding MGP_WSBEiJ_T0046071.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33685106 33693478 - MGP_WSBEiJ_P0046071 Brd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046072.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33685439 33691556 - MGP_WSBEiJ_P0046072 Brd2 protein_coding protein_coding MGP_WSBEiJ_T0046073.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33685760 33686809 - Brd2 protein_coding retained_intron MGP_WSBEiJ_T0046074.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33686835 33688028 - Brd2 protein_coding retained_intron MGP_WSBEiJ_T0046075.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33686837 33688054 - MGP_WSBEiJ_P0046075 Brd2 protein_coding protein_coding MGP_WSBEiJ_T0046076.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33686872 33688153 - MGP_WSBEiJ_P0046076 Brd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046077.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33687161 33695056 - MGP_WSBEiJ_P0046077 Brd2 protein_coding protein_coding MGP_WSBEiJ_T0046078.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33687840 33688547 - Brd2 protein_coding retained_intron MGP_WSBEiJ_T0046079.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33692594 33695018 - Brd2 protein_coding processed_transcript MGP_WSBEiJ_T0046080.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33692624 33695687 - Brd2 protein_coding processed_transcript MGP_WSBEiJ_T0046081.1 MGP_WSBEiJ_G0022844.1 mouse_genomes_project 17 33692933 33695702 - Brd2 protein_coding processed_transcript MGP_WSBEiJ_T0046625.1 MGP_WSBEiJ_G0022964.1 mouse_genomes_project 17 37148678 37157101 - MGP_WSBEiJ_P0046625 Trim40 protein_coding protein_coding MGP_WSBEiJ_T0046626.1 MGP_WSBEiJ_G0022964.1 mouse_genomes_project 17 37148925 37156604 - MGP_WSBEiJ_P0046626 Trim40 protein_coding protein_coding MGP_WSBEiJ_T0046627.1 MGP_WSBEiJ_G0022964.1 mouse_genomes_project 17 37150024 37157179 - Trim40 protein_coding retained_intron MGP_WSBEiJ_T0046628.1 MGP_WSBEiJ_G0022964.1 mouse_genomes_project 17 37156335 37157168 - Trim40 protein_coding processed_transcript MGP_WSBEiJ_T0044601.1 MGP_WSBEiJ_G0022443.1 mouse_genomes_project 17 8251774 8707552 - MGP_WSBEiJ_P0044601 Pacrg protein_coding protein_coding MGP_WSBEiJ_T0044602.1 MGP_WSBEiJ_G0022443.1 mouse_genomes_project 17 8431331 8491381 - Pacrg protein_coding processed_transcript MGP_WSBEiJ_T0045910.1 MGP_WSBEiJ_G0022815.1 mouse_genomes_project 17 32950016 32951389 + MGP_WSBEiJ_P0045910 Actl9 protein_coding protein_coding MGP_WSBEiJ_T0046814.1 MGP_WSBEiJ_G0023064.1 mouse_genomes_project 17 46663414 46667031 + MGP_WSBEiJ_P0046814 Slc35b2 protein_coding protein_coding MGP_WSBEiJ_T0045488.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26596337 26645841 - MGP_WSBEiJ_P0045488 Nudt3 protein_coding protein_coding MGP_WSBEiJ_T0045489.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26597529 26645340 - MGP_WSBEiJ_P0045489 Nudt3 protein_coding protein_coding MGP_WSBEiJ_T0045490.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26597661 26602464 - Nudt3 protein_coding retained_intron MGP_WSBEiJ_T0045491.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26597744 26645639 - MGP_WSBEiJ_P0045491 Nudt3 protein_coding protein_coding MGP_WSBEiJ_T0045492.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26597789 26644769 - Nudt3 protein_coding processed_transcript MGP_WSBEiJ_T0045493.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26597908 26634057 - Nudt3 protein_coding processed_transcript MGP_WSBEiJ_T0045494.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26601106 26645639 - MGP_WSBEiJ_P0045494 Nudt3 protein_coding protein_coding MGP_WSBEiJ_T0045495.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26601179 26645220 - MGP_WSBEiJ_P0045495 Nudt3 protein_coding protein_coding MGP_WSBEiJ_T0045496.1 MGP_WSBEiJ_G0022710.1 mouse_genomes_project 17 26617808 26645639 - Nudt3 protein_coding retained_intron MGP_WSBEiJ_T0006834.1 MGP_WSBEiJ_G0005629.1 mouse_genomes_project 17 31771689 31773729 + lincRNA lincRNA MGP_WSBEiJ_T0047540.1 MGP_WSBEiJ_G0023287.1 mouse_genomes_project 17 75435350 75449808 + MGP_WSBEiJ_P0047540 Ypel5 protein_coding protein_coding MGP_WSBEiJ_T0010025.1 MGP_WSBEiJ_G0008182.1 mouse_genomes_project 17 25907470 25907534 - Mir3083 miRNA miRNA MGP_WSBEiJ_T0100622.1 MGP_WSBEiJ_G0039080.1 mouse_genomes_project 17 19711215 19711728 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045034.1 MGP_WSBEiJ_G0022598.1 mouse_genomes_project 17 23380680 23417275 - MGP_WSBEiJ_P0045034 Tsc2 protein_coding protein_coding MGP_WSBEiJ_T0045035.1 MGP_WSBEiJ_G0022598.1 mouse_genomes_project 17 23381236 23417263 - MGP_WSBEiJ_P0045035 Tsc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0011238.1 MGP_WSBEiJ_G0009395.1 mouse_genomes_project 17 88794465 88794539 + Gm27610 misc_RNA misc_RNA MGP_WSBEiJ_T0000967.1 MGP_WSBEiJ_G0000902.1 mouse_genomes_project 17 73903440 73905965 - TEC TEC MGP_WSBEiJ_T0016955.1 MGP_WSBEiJ_G0014759.1 mouse_genomes_project 17 19208339 19209365 + Vmn1r227 processed_transcript pseudogene MGP_WSBEiJ_T0003638.1 MGP_WSBEiJ_G0003286.1 mouse_genomes_project 17 10651246 10774187 + antisense antisense MGP_WSBEiJ_T0003639.1 MGP_WSBEiJ_G0003286.1 mouse_genomes_project 17 10651265 10741891 + antisense antisense MGP_WSBEiJ_T0003640.1 MGP_WSBEiJ_G0003286.1 mouse_genomes_project 17 10651309 10725993 + antisense antisense MGP_WSBEiJ_T0003641.1 MGP_WSBEiJ_G0003286.1 mouse_genomes_project 17 10651320 10725153 + antisense antisense MGP_WSBEiJ_T0003642.1 MGP_WSBEiJ_G0003286.1 mouse_genomes_project 17 10651333 10741792 + antisense antisense MGP_WSBEiJ_T0003643.1 MGP_WSBEiJ_G0003286.1 mouse_genomes_project 17 10726366 10741976 + antisense antisense MGP_WSBEiJ_T0012973.1 MGP_WSBEiJ_G0011103.1 mouse_genomes_project 17 81889363 81890340 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045283.1 MGP_WSBEiJ_G0022664.1 mouse_genomes_project 17 24683156 24685985 - MGP_WSBEiJ_P0045283 Rhbdl1 protein_coding protein_coding MGP_WSBEiJ_T0045284.1 MGP_WSBEiJ_G0022664.1 mouse_genomes_project 17 24683293 24685772 - MGP_WSBEiJ_P0045284 Rhbdl1 protein_coding protein_coding MGP_WSBEiJ_T0045285.1 MGP_WSBEiJ_G0022664.1 mouse_genomes_project 17 24684462 24685941 - MGP_WSBEiJ_P0045285 Rhbdl1 protein_coding protein_coding MGP_WSBEiJ_T0011220.1 MGP_WSBEiJ_G0009377.1 mouse_genomes_project 17 27560554 27560861 + Gm22146 misc_RNA misc_RNA MGP_WSBEiJ_T0047168.1 MGP_WSBEiJ_G0023153.1 mouse_genomes_project 17 52010336 52194961 + MGP_WSBEiJ_P0047168 Plcl2 protein_coding protein_coding MGP_WSBEiJ_T0045807.1 MGP_WSBEiJ_G0022781.1 mouse_genomes_project 17 31035625 31039413 + MGP_WSBEiJ_P0045807 Cryaa protein_coding protein_coding MGP_WSBEiJ_T0097996.1 MGP_WSBEiJ_G0036659.1 mouse_genomes_project 17 35665495 35665602 - Gm23864 snRNA snRNA MGP_WSBEiJ_T0046120.1 MGP_WSBEiJ_G0022858.1 mouse_genomes_project 17 33958897 33975783 + MGP_WSBEiJ_P0046120 Btnl2 protein_coding protein_coding MGP_WSBEiJ_T0046121.1 MGP_WSBEiJ_G0022858.1 mouse_genomes_project 17 33958897 33975782 + MGP_WSBEiJ_P0046121 Btnl2 protein_coding protein_coding MGP_WSBEiJ_T0012982.1 MGP_WSBEiJ_G0011112.1 mouse_genomes_project 17 98362404 98362579 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046695.1 MGP_WSBEiJ_G0022992.1 mouse_genomes_project 17 37867117 37867827 + MGP_WSBEiJ_P0046695 protein_coding protein_coding MGP_WSBEiJ_T0047668.1 MGP_WSBEiJ_G0023342.1 mouse_genomes_project 17 86253751 86264783 + MGP_WSBEiJ_P0047668 Pkdcc protein_coding protein_coding MGP_WSBEiJ_T0047669.1 MGP_WSBEiJ_G0023342.1 mouse_genomes_project 17 86258581 86260271 + Pkdcc protein_coding processed_transcript MGP_WSBEiJ_T0047670.1 MGP_WSBEiJ_G0023342.1 mouse_genomes_project 17 86258581 86263976 + MGP_WSBEiJ_P0047670 Pkdcc protein_coding protein_coding MGP_WSBEiJ_T0047671.1 MGP_WSBEiJ_G0023342.1 mouse_genomes_project 17 86259563 86264287 + Pkdcc protein_coding processed_transcript MGP_WSBEiJ_T0011226.1 MGP_WSBEiJ_G0009383.1 mouse_genomes_project 17 37294883 37295131 + Gm22388 misc_RNA misc_RNA MGP_WSBEiJ_T0012918.1 MGP_WSBEiJ_G0011048.1 mouse_genomes_project 17 23188762 23195315 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045834.1 MGP_WSBEiJ_G0022789.1 mouse_genomes_project 17 31721540 31753165 - MGP_WSBEiJ_P0045834 Akap8l protein_coding protein_coding MGP_WSBEiJ_T0044662.1 MGP_WSBEiJ_G0022460.1 mouse_genomes_project 17 10951056 10960097 + MGP_WSBEiJ_P0044662 Sod2 protein_coding protein_coding MGP_WSBEiJ_T0047135.1 MGP_WSBEiJ_G0023144.1 mouse_genomes_project 17 49814236 49827622 - MGP_WSBEiJ_P0047135 Apobec2 protein_coding protein_coding MGP_WSBEiJ_T0046729.1 MGP_WSBEiJ_G0023019.1 mouse_genomes_project 17 39303142 39308549 + MGP_WSBEiJ_P0046729 protein_coding protein_coding MGP_WSBEiJ_T0011230.1 MGP_WSBEiJ_G0009387.1 mouse_genomes_project 17 50104860 50105118 - Gm23642 misc_RNA misc_RNA MGP_WSBEiJ_T0045043.1 MGP_WSBEiJ_G0022604.1 mouse_genomes_project 17 23487038 23489451 - MGP_WSBEiJ_P0045043 Gfer protein_coding protein_coding MGP_WSBEiJ_T0010060.1 MGP_WSBEiJ_G0008217.1 mouse_genomes_project 17 69305566 69305655 - Mir5709 miRNA miRNA MGP_WSBEiJ_T0047662.1 MGP_WSBEiJ_G0023339.1 mouse_genomes_project 17 84003455 84044670 - MGP_WSBEiJ_P0047662 Thumpd2 protein_coding protein_coding MGP_WSBEiJ_T0003708.1 MGP_WSBEiJ_G0003335.1 mouse_genomes_project 17 66919813 66925097 - Gm17133 antisense antisense MGP_WSBEiJ_T0044801.1 MGP_WSBEiJ_G0022521.1 mouse_genomes_project 17 19474337 19494646 + MGP_WSBEiJ_P0044801 Zfp160 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044922.1 MGP_WSBEiJ_G0022573.1 mouse_genomes_project 17 22701204 22704307 - MGP_WSBEiJ_P0044922 Prss30 protein_coding protein_coding MGP_WSBEiJ_T0044923.1 MGP_WSBEiJ_G0022573.1 mouse_genomes_project 17 22701917 22703878 - MGP_WSBEiJ_P0044923 Prss30 protein_coding protein_coding MGP_WSBEiJ_T0044924.1 MGP_WSBEiJ_G0022573.1 mouse_genomes_project 17 22702144 22704251 - Prss30 protein_coding retained_intron MGP_WSBEiJ_T0044925.1 MGP_WSBEiJ_G0022573.1 mouse_genomes_project 17 22702168 22703757 - MGP_WSBEiJ_P0044925 Prss30 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044926.1 MGP_WSBEiJ_G0022573.1 mouse_genomes_project 17 22702744 22704275 - MGP_WSBEiJ_P0044926 Prss30 protein_coding protein_coding MGP_WSBEiJ_T0044910.1 MGP_WSBEiJ_G0022568.1 mouse_genomes_project 17 22531228 22533612 - MGP_WSBEiJ_P0044910 Prss33 protein_coding protein_coding MGP_WSBEiJ_T0044911.1 MGP_WSBEiJ_G0022568.1 mouse_genomes_project 17 22531608 22533608 - MGP_WSBEiJ_P0044911 Prss33 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044912.1 MGP_WSBEiJ_G0022568.1 mouse_genomes_project 17 22532536 22533925 - Prss33 protein_coding retained_intron MGP_WSBEiJ_T0045448.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25900672 25933909 + MGP_WSBEiJ_P0045448 Syngap1 protein_coding protein_coding MGP_WSBEiJ_T0045449.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25900861 25932056 + MGP_WSBEiJ_P0045449 Syngap1 protein_coding protein_coding MGP_WSBEiJ_T0045450.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25900871 25932016 + MGP_WSBEiJ_P0045450 Syngap1 protein_coding protein_coding MGP_WSBEiJ_T0045451.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25900918 25932596 + MGP_WSBEiJ_P0045451 Syngap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045452.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25913668 25932408 + MGP_WSBEiJ_P0045452 Syngap1 protein_coding protein_coding MGP_WSBEiJ_T0045453.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25918924 25933909 + MGP_WSBEiJ_P0045453 Syngap1 protein_coding protein_coding MGP_WSBEiJ_T0045454.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25919380 25921666 + MGP_WSBEiJ_P0045454 Syngap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045455.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25921392 25922110 + Syngap1 protein_coding retained_intron MGP_WSBEiJ_T0045456.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25923860 25932037 + MGP_WSBEiJ_P0045456 Syngap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045457.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25924566 25932066 + MGP_WSBEiJ_P0045457 Syngap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045458.1 MGP_WSBEiJ_G0022699.1 mouse_genomes_project 17 25924580 25932062 + MGP_WSBEiJ_P0045458 Syngap1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045129.1 MGP_WSBEiJ_G0022624.1 mouse_genomes_project 17 23772291 23827023 - MGP_WSBEiJ_P0045129 Cramp1l protein_coding unknown_likely_coding MGP_WSBEiJ_T0003709.1 MGP_WSBEiJ_G0003336.1 mouse_genomes_project 17 73306954 73308343 + Gm20703 antisense antisense MGP_WSBEiJ_T0100626.1 MGP_WSBEiJ_G0039084.1 mouse_genomes_project 17 21561553 21781964 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046694.1 MGP_WSBEiJ_G0022991.1 mouse_genomes_project 17 37860887 37867827 + MGP_WSBEiJ_P0046694 protein_coding protein_coding MGP_WSBEiJ_T0100671.1 MGP_WSBEiJ_G0039129.1 mouse_genomes_project 17 37781394 37783376 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045701.1 MGP_WSBEiJ_G0022753.1 mouse_genomes_project 17 28731259 28731769 - MGP_WSBEiJ_P0045701 Gm17657 protein_coding protein_coding MGP_WSBEiJ_T0003651.1 MGP_WSBEiJ_G0003293.1 mouse_genomes_project 17 25478795 25485899 - 1700049J03Rik antisense antisense MGP_WSBEiJ_T0012916.1 MGP_WSBEiJ_G0011046.1 mouse_genomes_project 17 22177086 22177354 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046590.1 MGP_WSBEiJ_G0022954.1 mouse_genomes_project 17 36182510 36192815 - MGP_WSBEiJ_P0046590 protein_coding protein_coding MGP_WSBEiJ_T0046591.1 MGP_WSBEiJ_G0022954.1 mouse_genomes_project 17 36183177 36184235 - MGP_WSBEiJ_P0046591 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046592.1 MGP_WSBEiJ_G0022954.1 mouse_genomes_project 17 36183177 36184220 - MGP_WSBEiJ_P0046592 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0000958.1 MGP_WSBEiJ_G0000893.1 mouse_genomes_project 17 53320155 53324936 - TEC TEC MGP_WSBEiJ_T0012913.1 MGP_WSBEiJ_G0011043.1 mouse_genomes_project 17 20505847 20506295 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046058.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33603370 33630657 + MGP_WSBEiJ_P0046058 Col11a2 protein_coding protein_coding MGP_WSBEiJ_T0046059.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33603370 33616906 + MGP_WSBEiJ_P0046059 Col11a2 protein_coding protein_coding MGP_WSBEiJ_T0046060.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33603370 33630657 + MGP_WSBEiJ_P0046060 Col11a2 protein_coding protein_coding MGP_WSBEiJ_T0046061.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33603370 33631100 + MGP_WSBEiJ_P0046061 Col11a2 protein_coding protein_coding MGP_WSBEiJ_T0046062.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33603588 33630223 + MGP_WSBEiJ_P0046062 Col11a2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046063.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33612214 33624371 + MGP_WSBEiJ_P0046063 Col11a2 protein_coding protein_coding MGP_WSBEiJ_T0046064.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33616695 33618722 + Col11a2 protein_coding processed_transcript MGP_WSBEiJ_T0046065.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33619471 33620835 + Col11a2 protein_coding retained_intron MGP_WSBEiJ_T0046066.1 MGP_WSBEiJ_G0022842.1 mouse_genomes_project 17 33626837 33629208 + Col11a2 protein_coding retained_intron MGP_WSBEiJ_T0006822.1 MGP_WSBEiJ_G0005621.1 mouse_genomes_project 17 28179306 28181273 - Gm16196 lincRNA lincRNA MGP_WSBEiJ_T0045249.1 MGP_WSBEiJ_G0022654.1 mouse_genomes_project 17 24622545 24631453 + MGP_WSBEiJ_P0045249 Narfl protein_coding protein_coding MGP_WSBEiJ_T0045250.1 MGP_WSBEiJ_G0022654.1 mouse_genomes_project 17 24622545 24631994 + MGP_WSBEiJ_P0045250 Narfl protein_coding protein_coding MGP_WSBEiJ_T0045251.1 MGP_WSBEiJ_G0022654.1 mouse_genomes_project 17 24622576 24623981 + Narfl protein_coding retained_intron MGP_WSBEiJ_T0045252.1 MGP_WSBEiJ_G0022654.1 mouse_genomes_project 17 24622586 24628175 + MGP_WSBEiJ_P0045252 Narfl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045253.1 MGP_WSBEiJ_G0022654.1 mouse_genomes_project 17 24622588 24631458 + Narfl protein_coding retained_intron MGP_WSBEiJ_T0045254.1 MGP_WSBEiJ_G0022654.1 mouse_genomes_project 17 24625480 24628255 + Narfl protein_coding retained_intron MGP_WSBEiJ_T0012971.1 MGP_WSBEiJ_G0011101.1 mouse_genomes_project 17 79024038 79024485 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003658.1 MGP_WSBEiJ_G0003300.1 mouse_genomes_project 17 28060796 28062297 + 1700030A11Rik antisense antisense MGP_WSBEiJ_T0046123.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34008320 34071954 + MGP_WSBEiJ_P0046123 BC051142 protein_coding protein_coding MGP_WSBEiJ_T0046124.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34008321 34029145 + BC051142 protein_coding processed_transcript MGP_WSBEiJ_T0046125.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34008321 34071953 + MGP_WSBEiJ_P0046125 BC051142 protein_coding protein_coding MGP_WSBEiJ_T0046126.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34008321 34056734 + MGP_WSBEiJ_P0046126 BC051142 protein_coding protein_coding MGP_WSBEiJ_T0046127.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34008322 34032266 + BC051142 protein_coding retained_intron MGP_WSBEiJ_T0046128.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34008341 34071953 + MGP_WSBEiJ_P0046128 BC051142 protein_coding protein_coding MGP_WSBEiJ_T0046129.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34009034 34063803 + MGP_WSBEiJ_P0046129 BC051142 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046130.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34009036 34071954 + MGP_WSBEiJ_P0046130 BC051142 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046131.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34028529 34051095 + MGP_WSBEiJ_P0046131 BC051142 protein_coding protein_coding MGP_WSBEiJ_T0046132.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34029140 34047317 + BC051142 protein_coding processed_transcript MGP_WSBEiJ_T0046133.1 MGP_WSBEiJ_G0022860.1 mouse_genomes_project 17 34029162 34033040 + MGP_WSBEiJ_P0046133 BC051142 protein_coding protein_coding MGP_WSBEiJ_T0045776.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30828744 30848223 - MGP_WSBEiJ_P0045776 Wdr4 protein_coding protein_coding MGP_WSBEiJ_T0045777.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30828744 30847805 - MGP_WSBEiJ_P0045777 Wdr4 protein_coding protein_coding MGP_WSBEiJ_T0045778.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30828745 30847740 - MGP_WSBEiJ_P0045778 Wdr4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045779.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30828747 30847740 - MGP_WSBEiJ_P0045779 Wdr4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045780.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30830541 30835721 - Wdr4 protein_coding retained_intron MGP_WSBEiJ_T0045781.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30833864 30838002 - Wdr4 protein_coding retained_intron MGP_WSBEiJ_T0045782.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30837471 30845390 - Wdr4 protein_coding retained_intron MGP_WSBEiJ_T0045783.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30837959 30855376 - MGP_WSBEiJ_P0045783 Wdr4 protein_coding protein_coding MGP_WSBEiJ_T0045784.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30837969 30847750 - MGP_WSBEiJ_P0045784 Wdr4 protein_coding protein_coding MGP_WSBEiJ_T0045785.1 MGP_WSBEiJ_G0022776.1 mouse_genomes_project 17 30847914 30855436 - Wdr4 protein_coding processed_transcript MGP_WSBEiJ_T0045223.1 MGP_WSBEiJ_G0022647.1 mouse_genomes_project 17 24406019 24410791 - MGP_WSBEiJ_P0045223 Sox8 protein_coding protein_coding MGP_WSBEiJ_T0045224.1 MGP_WSBEiJ_G0022647.1 mouse_genomes_project 17 24408105 24410319 - MGP_WSBEiJ_P0045224 Sox8 protein_coding protein_coding MGP_WSBEiJ_T0045225.1 MGP_WSBEiJ_G0022647.1 mouse_genomes_project 17 24408814 24410791 - MGP_WSBEiJ_P0045225 Sox8 protein_coding protein_coding MGP_WSBEiJ_T0044816.1 MGP_WSBEiJ_G0022533.1 mouse_genomes_project 17 20191557 20191816 + MGP_WSBEiJ_P0044816 Gm10509 protein_coding protein_coding MGP_WSBEiJ_T0046423.1 MGP_WSBEiJ_G0022922.1 mouse_genomes_project 17 35183626 35184634 + MGP_WSBEiJ_P0046423 protein_coding protein_coding MGP_WSBEiJ_T0044792.1 MGP_WSBEiJ_G0022518.1 mouse_genomes_project 17 19383547 19384706 - MGP_WSBEiJ_P0044792 Vmn1r232 protein_coding protein_coding MGP_WSBEiJ_T0011232.1 MGP_WSBEiJ_G0009389.1 mouse_genomes_project 17 69866442 69866719 + Gm22277 misc_RNA misc_RNA MGP_WSBEiJ_T0047608.1 MGP_WSBEiJ_G0023313.1 mouse_genomes_project 17 81682596 81715588 - MGP_WSBEiJ_P0047608 Eif2ak2 protein_coding protein_coding MGP_WSBEiJ_T0047609.1 MGP_WSBEiJ_G0023313.1 mouse_genomes_project 17 81684810 81688443 - Eif2ak2 protein_coding processed_transcript MGP_WSBEiJ_T0047610.1 MGP_WSBEiJ_G0023313.1 mouse_genomes_project 17 81706800 81715563 - Eif2ak2 protein_coding processed_transcript MGP_WSBEiJ_T0047611.1 MGP_WSBEiJ_G0023313.1 mouse_genomes_project 17 81711152 81715569 - Eif2ak2 protein_coding processed_transcript MGP_WSBEiJ_T0044920.1 MGP_WSBEiJ_G0022571.1 mouse_genomes_project 17 22566627 22571662 + MGP_WSBEiJ_P0044920 Prss21 protein_coding protein_coding MGP_WSBEiJ_T0046294.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34781924 34797046 + MGP_WSBEiJ_P0046294 Vars protein_coding protein_coding MGP_WSBEiJ_T0046295.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34781988 34796754 + MGP_WSBEiJ_P0046295 Vars protein_coding protein_coding MGP_WSBEiJ_T0046296.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34782254 34785728 + MGP_WSBEiJ_P0046296 Vars protein_coding protein_coding MGP_WSBEiJ_T0046297.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34783582 34785778 + MGP_WSBEiJ_P0046297 Vars protein_coding protein_coding MGP_WSBEiJ_T0046298.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34783639 34797046 + Vars protein_coding retained_intron MGP_WSBEiJ_T0046299.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34785219 34785987 + Vars protein_coding retained_intron MGP_WSBEiJ_T0046300.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34785637 34786255 + Vars protein_coding retained_intron MGP_WSBEiJ_T0046301.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34791929 34793114 + Vars protein_coding retained_intron MGP_WSBEiJ_T0046302.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34792878 34793797 + Vars protein_coding retained_intron MGP_WSBEiJ_T0046303.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34793997 34795181 + Vars protein_coding retained_intron MGP_WSBEiJ_T0046304.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34794538 34795759 + MGP_WSBEiJ_P0046304 Vars protein_coding protein_coding MGP_WSBEiJ_T0046305.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34794547 34795549 + Vars protein_coding retained_intron MGP_WSBEiJ_T0046306.1 MGP_WSBEiJ_G0022892.1 mouse_genomes_project 17 34795676 34796735 + Vars protein_coding retained_intron MGP_WSBEiJ_T0097198.1 MGP_WSBEiJ_G0035879.1 mouse_genomes_project 17 5593049 5593137 + Gm22416 scaRNA scaRNA MGP_WSBEiJ_T0047407.1 MGP_WSBEiJ_G0023254.1 mouse_genomes_project 17 68183084 68289185 - MGP_WSBEiJ_P0047407 Ankrd12 protein_coding protein_coding MGP_WSBEiJ_T0047408.1 MGP_WSBEiJ_G0023254.1 mouse_genomes_project 17 68183596 68187982 - Ankrd12 protein_coding processed_transcript MGP_WSBEiJ_T0047409.1 MGP_WSBEiJ_G0023254.1 mouse_genomes_project 17 68191409 68198286 - Ankrd12 protein_coding processed_transcript MGP_WSBEiJ_T0047410.1 MGP_WSBEiJ_G0023254.1 mouse_genomes_project 17 68202376 68289161 - MGP_WSBEiJ_P0047410 Ankrd12 protein_coding protein_coding MGP_WSBEiJ_T0047411.1 MGP_WSBEiJ_G0023254.1 mouse_genomes_project 17 68228797 68289183 - Ankrd12 protein_coding retained_intron MGP_WSBEiJ_T0047412.1 MGP_WSBEiJ_G0023254.1 mouse_genomes_project 17 68246086 68289228 - Ankrd12 protein_coding retained_intron MGP_WSBEiJ_T0047413.1 MGP_WSBEiJ_G0023254.1 mouse_genomes_project 17 68246401 68289178 - Ankrd12 protein_coding retained_intron MGP_WSBEiJ_T0047414.1 MGP_WSBEiJ_G0023254.1 mouse_genomes_project 17 68260534 68261389 - Ankrd12 protein_coding processed_transcript MGP_WSBEiJ_T0096794.1 MGP_WSBEiJ_G0035475.1 mouse_genomes_project 17 32950016 32951386 + pseudogene pseudogene MGP_WSBEiJ_T0044704.1 MGP_WSBEiJ_G0022475.1 mouse_genomes_project 17 13478236 13486875 - MGP_WSBEiJ_P0044704 Dll1 protein_coding protein_coding MGP_WSBEiJ_T0044705.1 MGP_WSBEiJ_G0022475.1 mouse_genomes_project 17 13478407 13479274 - Dll1 protein_coding retained_intron MGP_WSBEiJ_T0044706.1 MGP_WSBEiJ_G0022475.1 mouse_genomes_project 17 13481141 13482730 - Dll1 protein_coding processed_transcript MGP_WSBEiJ_T0044707.1 MGP_WSBEiJ_G0022475.1 mouse_genomes_project 17 13481494 13484971 - Dll1 protein_coding processed_transcript MGP_WSBEiJ_T0044708.1 MGP_WSBEiJ_G0022475.1 mouse_genomes_project 17 13482522 13485999 - Dll1 protein_coding retained_intron MGP_WSBEiJ_T0044709.1 MGP_WSBEiJ_G0022475.1 mouse_genomes_project 17 13485692 13489156 - Dll1 protein_coding processed_transcript MGP_WSBEiJ_T0045159.1 MGP_WSBEiJ_G0022630.1 mouse_genomes_project 17 23975209 23984604 + MGP_WSBEiJ_P0045159 Ccdc154 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045160.1 MGP_WSBEiJ_G0022630.1 mouse_genomes_project 17 23975209 23984604 + MGP_WSBEiJ_P0045160 Ccdc154 protein_coding protein_coding MGP_WSBEiJ_T0045161.1 MGP_WSBEiJ_G0022630.1 mouse_genomes_project 17 23975212 23984602 + MGP_WSBEiJ_P0045161 Ccdc154 protein_coding protein_coding MGP_WSBEiJ_T0045162.1 MGP_WSBEiJ_G0022630.1 mouse_genomes_project 17 23975590 23984573 + MGP_WSBEiJ_P0045162 Ccdc154 protein_coding protein_coding MGP_WSBEiJ_T0006804.1 MGP_WSBEiJ_G0005606.1 mouse_genomes_project 17 19970953 19974649 - Gm26753 lincRNA lincRNA MGP_WSBEiJ_T0012926.1 MGP_WSBEiJ_G0011056.1 mouse_genomes_project 17 34278542 34278950 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047529.1 MGP_WSBEiJ_G0023282.1 mouse_genomes_project 17 74165289 74212069 + MGP_WSBEiJ_P0047529 Wdr43 protein_coding protein_coding MGP_WSBEiJ_T0047601.1 MGP_WSBEiJ_G0023308.1 mouse_genomes_project 17 81313508 81449649 + MGP_WSBEiJ_P0047601 Vit protein_coding protein_coding MGP_WSBEiJ_T0044479.1 MGP_WSBEiJ_G0022405.1 mouse_genomes_project 17 2521860 2551589 - MGP_WSBEiJ_P0044479 Tmem242 protein_coding protein_coding MGP_WSBEiJ_T0044481.1 MGP_WSBEiJ_G0022405.1 mouse_genomes_project 17 2543622 2551605 - MGP_WSBEiJ_P0044481 Tmem242 protein_coding protein_coding MGP_WSBEiJ_T0044482.1 MGP_WSBEiJ_G0022405.1 mouse_genomes_project 17 2544352 2551602 - MGP_WSBEiJ_P0044482 Tmem242 protein_coding protein_coding MGP_WSBEiJ_T0010043.1 MGP_WSBEiJ_G0008200.1 mouse_genomes_project 17 35007550 35007633 - Mir6974 miRNA miRNA MGP_WSBEiJ_T0044644.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10834488 10837438 + Tcp1 protein_coding processed_transcript MGP_WSBEiJ_T0044645.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10835226 10837703 + MGP_WSBEiJ_P0044645 Tcp1 protein_coding protein_coding MGP_WSBEiJ_T0044646.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10835236 10839552 + Tcp1 protein_coding retained_intron MGP_WSBEiJ_T0044647.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10835236 10843886 + Tcp1 protein_coding retained_intron MGP_WSBEiJ_T0044648.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10835262 10838882 + Tcp1 protein_coding retained_intron MGP_WSBEiJ_T0044649.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10835353 10844383 + MGP_WSBEiJ_P0044649 Tcp1 protein_coding protein_coding MGP_WSBEiJ_T0044650.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10838996 10839964 + Tcp1 protein_coding retained_intron MGP_WSBEiJ_T0044651.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10839440 10842056 + Tcp1 protein_coding retained_intron MGP_WSBEiJ_T0044652.1 MGP_WSBEiJ_G0022456.1 mouse_genomes_project 17 10839604 10840472 + Tcp1 protein_coding retained_intron MGP_WSBEiJ_T0047788.1 MGP_WSBEiJ_G0023383.1 mouse_genomes_project 17 92091475 92144075 + MGP_WSBEiJ_P0047788 Gtf2a1l protein_coding protein_coding MGP_WSBEiJ_T0047789.1 MGP_WSBEiJ_G0023383.1 mouse_genomes_project 17 92091511 92121779 + MGP_WSBEiJ_P0047789 Gtf2a1l protein_coding protein_coding MGP_WSBEiJ_T0047190.1 MGP_WSBEiJ_G0023160.1 mouse_genomes_project 17 55186275 55247034 + Kat2b protein_coding processed_transcript MGP_WSBEiJ_T0047191.1 MGP_WSBEiJ_G0023160.1 mouse_genomes_project 17 55186386 55310317 + MGP_WSBEiJ_P0047191 Kat2b protein_coding protein_coding MGP_WSBEiJ_T0047192.1 MGP_WSBEiJ_G0023160.1 mouse_genomes_project 17 55206134 55263874 + MGP_WSBEiJ_P0047192 Kat2b protein_coding protein_coding MGP_WSBEiJ_T0047193.1 MGP_WSBEiJ_G0023160.1 mouse_genomes_project 17 55274806 55309668 + MGP_WSBEiJ_P0047193 Kat2b protein_coding protein_coding MGP_WSBEiJ_T0047194.1 MGP_WSBEiJ_G0023160.1 mouse_genomes_project 17 55292614 55301246 + Kat2b protein_coding retained_intron MGP_WSBEiJ_T0047195.1 MGP_WSBEiJ_G0023160.1 mouse_genomes_project 17 55292687 55301271 + Kat2b protein_coding retained_intron MGP_WSBEiJ_T0047196.1 MGP_WSBEiJ_G0023160.1 mouse_genomes_project 17 55292771 55308283 + MGP_WSBEiJ_P0047196 Kat2b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046781.1 MGP_WSBEiJ_G0023052.1 mouse_genomes_project 17 44827665 45072060 + MGP_WSBEiJ_P0046781 Rcan2 protein_coding protein_coding MGP_WSBEiJ_T0046782.1 MGP_WSBEiJ_G0023052.1 mouse_genomes_project 17 44986263 45069957 + MGP_WSBEiJ_P0046782 Rcan2 protein_coding protein_coding MGP_WSBEiJ_T0046783.1 MGP_WSBEiJ_G0023052.1 mouse_genomes_project 17 44986482 45072060 + MGP_WSBEiJ_P0046783 Rcan2 protein_coding protein_coding MGP_WSBEiJ_T0047319.1 MGP_WSBEiJ_G0023216.1 mouse_genomes_project 17 58812131 58818091 + MGP_WSBEiJ_P0047319 Clpp protein_coding protein_coding MGP_WSBEiJ_T0012951.1 MGP_WSBEiJ_G0011081.1 mouse_genomes_project 17 49344356 49344550 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045411.1 MGP_WSBEiJ_G0022688.1 mouse_genomes_project 17 25176334 25177223 - MGP_WSBEiJ_P0045411 protein_coding protein_coding MGP_WSBEiJ_T0045505.1 MGP_WSBEiJ_G0022712.1 mouse_genomes_project 17 26716675 26717545 + Pacsin1 protein_coding processed_transcript MGP_WSBEiJ_T0045506.1 MGP_WSBEiJ_G0022712.1 mouse_genomes_project 17 26716716 26739914 + MGP_WSBEiJ_P0045506 Pacsin1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0010067.1 MGP_WSBEiJ_G0008224.1 mouse_genomes_project 17 95372803 95372938 + Gm44345 miRNA miRNA MGP_WSBEiJ_T0012962.1 MGP_WSBEiJ_G0011092.1 mouse_genomes_project 17 63348106 63349148 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003705.1 MGP_WSBEiJ_G0003334.1 mouse_genomes_project 17 60830109 60846815 + Nudt12os antisense antisense MGP_WSBEiJ_T0003706.1 MGP_WSBEiJ_G0003334.1 mouse_genomes_project 17 60830133 60859817 + Nudt12os antisense antisense MGP_WSBEiJ_T0003707.1 MGP_WSBEiJ_G0003334.1 mouse_genomes_project 17 60851988 60859565 + Nudt12os antisense antisense MGP_WSBEiJ_T0047386.1 MGP_WSBEiJ_G0023247.1 mouse_genomes_project 17 67437476 67729431 - MGP_WSBEiJ_P0047386 Tmem232 protein_coding protein_coding MGP_WSBEiJ_T0047387.1 MGP_WSBEiJ_G0023247.1 mouse_genomes_project 17 67437478 67729425 - MGP_WSBEiJ_P0047387 Tmem232 protein_coding protein_coding MGP_WSBEiJ_T0012935.1 MGP_WSBEiJ_G0011065.1 mouse_genomes_project 17 36637377 36637940 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003687.1 MGP_WSBEiJ_G0003321.1 mouse_genomes_project 17 37197416 37206911 + 1700031A10Rik antisense antisense MGP_WSBEiJ_T0044836.1 MGP_WSBEiJ_G0022544.1 mouse_genomes_project 17 21014518 21037193 + Zfp946 protein_coding processed_transcript MGP_WSBEiJ_T0044837.1 MGP_WSBEiJ_G0022544.1 mouse_genomes_project 17 21014555 21047605 + MGP_WSBEiJ_P0044837 Zfp946 protein_coding protein_coding MGP_WSBEiJ_T0044838.1 MGP_WSBEiJ_G0022544.1 mouse_genomes_project 17 21014564 21047605 + MGP_WSBEiJ_P0044838 Zfp946 protein_coding protein_coding MGP_WSBEiJ_T0044839.1 MGP_WSBEiJ_G0022544.1 mouse_genomes_project 17 21034998 21047606 + MGP_WSBEiJ_P0044839 Zfp946 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044840.1 MGP_WSBEiJ_G0022544.1 mouse_genomes_project 17 21040887 21046754 + MGP_WSBEiJ_P0044840 Zfp946 protein_coding protein_coding MGP_WSBEiJ_T0100623.1 MGP_WSBEiJ_G0039081.1 mouse_genomes_project 17 19756500 19756683 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045045.1 MGP_WSBEiJ_G0022606.1 mouse_genomes_project 17 23492370 23507507 - MGP_WSBEiJ_P0045045 Tbl3 protein_coding protein_coding MGP_WSBEiJ_T0045054.1 MGP_WSBEiJ_G0022606.1 mouse_genomes_project 17 23494884 23507478 - Tbl3 protein_coding retained_intron MGP_WSBEiJ_T0045055.1 MGP_WSBEiJ_G0022606.1 mouse_genomes_project 17 23495099 23507411 - MGP_WSBEiJ_P0045055 Tbl3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045056.1 MGP_WSBEiJ_G0022606.1 mouse_genomes_project 17 23495312 23496934 - MGP_WSBEiJ_P0045056 Tbl3 protein_coding protein_coding MGP_WSBEiJ_T0045057.1 MGP_WSBEiJ_G0022606.1 mouse_genomes_project 17 23496444 23497751 - Tbl3 protein_coding retained_intron MGP_WSBEiJ_T0045058.1 MGP_WSBEiJ_G0022606.1 mouse_genomes_project 17 23500303 23503499 - Tbl3 protein_coding retained_intron MGP_WSBEiJ_T0045709.1 MGP_WSBEiJ_G0022757.1 mouse_genomes_project 17 28841203 28935974 + MGP_WSBEiJ_P0045709 Gm28043 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045554.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27409023 27423730 + MGP_WSBEiJ_P0045554 Fance protein_coding protein_coding MGP_WSBEiJ_T0045555.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27409040 27423730 + Fance protein_coding retained_intron MGP_WSBEiJ_T0045556.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27409059 27423729 + MGP_WSBEiJ_P0045556 Fance protein_coding protein_coding MGP_WSBEiJ_T0045557.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27409065 27423731 + MGP_WSBEiJ_P0045557 Fance protein_coding protein_coding MGP_WSBEiJ_T0045558.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27409137 27423416 + MGP_WSBEiJ_P0045558 Fance protein_coding protein_coding MGP_WSBEiJ_T0045559.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27413345 27418093 + MGP_WSBEiJ_P0045559 Fance protein_coding protein_coding MGP_WSBEiJ_T0045560.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27413382 27414368 + Fance protein_coding retained_intron MGP_WSBEiJ_T0045561.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27414278 27415498 + Fance protein_coding retained_intron MGP_WSBEiJ_T0045562.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27414734 27416164 + Fance protein_coding processed_transcript MGP_WSBEiJ_T0045563.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27414789 27423447 + MGP_WSBEiJ_P0045563 Fance protein_coding protein_coding MGP_WSBEiJ_T0045564.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27415088 27418077 + Fance protein_coding retained_intron MGP_WSBEiJ_T0045565.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27415345 27423612 + MGP_WSBEiJ_P0045565 Fance protein_coding protein_coding MGP_WSBEiJ_T0045566.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27415574 27423662 + MGP_WSBEiJ_P0045566 Fance protein_coding protein_coding MGP_WSBEiJ_T0045567.1 MGP_WSBEiJ_G0022724.1 mouse_genomes_project 17 27415683 27423730 + Fance protein_coding processed_transcript MGP_WSBEiJ_T0006879.1 MGP_WSBEiJ_G0005661.1 mouse_genomes_project 17 73354075 73905965 + lincRNA lincRNA MGP_WSBEiJ_T0012949.1 MGP_WSBEiJ_G0011079.1 mouse_genomes_project 17 48918609 48920178 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100659.1 MGP_WSBEiJ_G0039117.1 mouse_genomes_project 17 36941674 36942002 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047231.1 MGP_WSBEiJ_G0023181.1 mouse_genomes_project 17 57818272 57826256 - MGP_WSBEiJ_P0047231 Ubxn6 protein_coding protein_coding MGP_WSBEiJ_T0047232.1 MGP_WSBEiJ_G0023181.1 mouse_genomes_project 17 57819477 57826245 - Ubxn6 protein_coding retained_intron MGP_WSBEiJ_T0047233.1 MGP_WSBEiJ_G0023181.1 mouse_genomes_project 17 57819477 57823460 - Ubxn6 protein_coding retained_intron MGP_WSBEiJ_T0047234.1 MGP_WSBEiJ_G0023181.1 mouse_genomes_project 17 57819763 57820662 - Ubxn6 protein_coding retained_intron MGP_WSBEiJ_T0047235.1 MGP_WSBEiJ_G0023181.1 mouse_genomes_project 17 57820865 57823668 - Ubxn6 protein_coding processed_transcript MGP_WSBEiJ_T0047236.1 MGP_WSBEiJ_G0023181.1 mouse_genomes_project 17 57821345 57826076 - Ubxn6 protein_coding retained_intron MGP_WSBEiJ_T0047237.1 MGP_WSBEiJ_G0023181.1 mouse_genomes_project 17 57821871 57825775 - MGP_WSBEiJ_P0047237 Ubxn6 protein_coding protein_coding MGP_WSBEiJ_T0047318.1 MGP_WSBEiJ_G0023215.1 mouse_genomes_project 17 58773324 58804150 - MGP_WSBEiJ_P0047318 Acer1 protein_coding protein_coding MGP_WSBEiJ_T0045027.1 MGP_WSBEiJ_G0022596.1 mouse_genomes_project 17 23306024 23312545 - MGP_WSBEiJ_P0045027 Rab26 protein_coding protein_coding MGP_WSBEiJ_T0045028.1 MGP_WSBEiJ_G0022596.1 mouse_genomes_project 17 23307876 23312707 - MGP_WSBEiJ_P0045028 Rab26 protein_coding protein_coding MGP_WSBEiJ_T0045029.1 MGP_WSBEiJ_G0022596.1 mouse_genomes_project 17 23307887 23312531 - Rab26 protein_coding retained_intron MGP_WSBEiJ_T0045030.1 MGP_WSBEiJ_G0022596.1 mouse_genomes_project 17 23308143 23308771 - Rab26 protein_coding retained_intron MGP_WSBEiJ_T0045031.1 MGP_WSBEiJ_G0022596.1 mouse_genomes_project 17 23308365 23313029 - MGP_WSBEiJ_P0045031 Rab26 protein_coding protein_coding MGP_WSBEiJ_T0100661.1 MGP_WSBEiJ_G0039119.1 mouse_genomes_project 17 37454942 37455795 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045077.1 MGP_WSBEiJ_G0022615.1 mouse_genomes_project 17 23658636 23662178 + MGP_WSBEiJ_P0045077 Hagh protein_coding protein_coding MGP_WSBEiJ_T0045078.1 MGP_WSBEiJ_G0022615.1 mouse_genomes_project 17 23658639 23672139 + MGP_WSBEiJ_P0045078 Hagh protein_coding protein_coding MGP_WSBEiJ_T0045079.1 MGP_WSBEiJ_G0022615.1 mouse_genomes_project 17 23658653 23672142 + MGP_WSBEiJ_P0045079 Hagh protein_coding protein_coding MGP_WSBEiJ_T0045080.1 MGP_WSBEiJ_G0022615.1 mouse_genomes_project 17 23658727 23668927 + MGP_WSBEiJ_P0045080 Hagh protein_coding protein_coding MGP_WSBEiJ_T0045081.1 MGP_WSBEiJ_G0022615.1 mouse_genomes_project 17 23666081 23672296 + Hagh protein_coding processed_transcript MGP_WSBEiJ_T0047692.1 MGP_WSBEiJ_G0023351.1 mouse_genomes_project 17 87794324 87819341 - MGP_WSBEiJ_P0047692 Abcg5 protein_coding protein_coding MGP_WSBEiJ_T0047693.1 MGP_WSBEiJ_G0023351.1 mouse_genomes_project 17 87794578 87818532 - MGP_WSBEiJ_P0047693 Abcg5 protein_coding protein_coding MGP_WSBEiJ_T0047694.1 MGP_WSBEiJ_G0023351.1 mouse_genomes_project 17 87806229 87810686 - Abcg5 protein_coding processed_transcript MGP_WSBEiJ_T0047695.1 MGP_WSBEiJ_G0023351.1 mouse_genomes_project 17 87806707 87812777 - Abcg5 protein_coding retained_intron MGP_WSBEiJ_T0012898.1 MGP_WSBEiJ_G0011028.1 mouse_genomes_project 17 2978386 2978688 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044835.1 MGP_WSBEiJ_G0022543.1 mouse_genomes_project 17 20773886 20777961 - MGP_WSBEiJ_P0044835 Zfp820 protein_coding protein_coding MGP_WSBEiJ_T0003715.1 MGP_WSBEiJ_G0003342.1 mouse_genomes_project 17 90659047 90661271 - 0610012D04Rik antisense antisense MGP_WSBEiJ_T0045864.1 MGP_WSBEiJ_G0022796.1 mouse_genomes_project 17 32117772 32137787 + MGP_WSBEiJ_P0045864 Cyp4f40 protein_coding protein_coding MGP_WSBEiJ_T0047314.1 MGP_WSBEiJ_G0023212.1 mouse_genomes_project 17 58654006 58685366 - MGP_WSBEiJ_P0047314 Acsbg2 protein_coding protein_coding MGP_WSBEiJ_T0012903.1 MGP_WSBEiJ_G0011033.1 mouse_genomes_project 17 7133194 7134932 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100658.1 MGP_WSBEiJ_G0039116.1 mouse_genomes_project 17 36940972 36941020 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045862.1 MGP_WSBEiJ_G0022794.1 mouse_genomes_project 17 31917158 31946453 + MGP_WSBEiJ_P0045862 Cyp4f17 protein_coding protein_coding MGP_WSBEiJ_T0046769.1 MGP_WSBEiJ_G0023048.1 mouse_genomes_project 17 44571864 44608298 + MGP_WSBEiJ_P0046769 Pla2g7 protein_coding protein_coding MGP_WSBEiJ_T0046770.1 MGP_WSBEiJ_G0023048.1 mouse_genomes_project 17 44572035 44619869 + MGP_WSBEiJ_P0046770 Pla2g7 protein_coding protein_coding MGP_WSBEiJ_T0046771.1 MGP_WSBEiJ_G0023048.1 mouse_genomes_project 17 44572241 44602043 + MGP_WSBEiJ_P0046771 Pla2g7 protein_coding protein_coding MGP_WSBEiJ_T0046772.1 MGP_WSBEiJ_G0023048.1 mouse_genomes_project 17 44572401 44596920 + Pla2g7 protein_coding processed_transcript MGP_WSBEiJ_T0046773.1 MGP_WSBEiJ_G0023048.1 mouse_genomes_project 17 44572439 44614905 + MGP_WSBEiJ_P0046773 Pla2g7 protein_coding protein_coding MGP_WSBEiJ_T0046774.1 MGP_WSBEiJ_G0023048.1 mouse_genomes_project 17 44572481 44615280 + Pla2g7 protein_coding retained_intron MGP_WSBEiJ_T0012914.1 MGP_WSBEiJ_G0011044.1 mouse_genomes_project 17 20514620 20515362 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100038.1 MGP_WSBEiJ_G0038666.1 mouse_genomes_project 17 27139107 27141772 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100039.1 MGP_WSBEiJ_G0038666.1 mouse_genomes_project 17 27139258 27141446 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100613.1 MGP_WSBEiJ_G0039071.1 mouse_genomes_project 17 18256965 18294587 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100243.1 MGP_WSBEiJ_G0038783.1 mouse_genomes_project 17 98354797 98381772 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100244.1 MGP_WSBEiJ_G0038783.1 mouse_genomes_project 17 98354809 98362723 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100245.1 MGP_WSBEiJ_G0038783.1 mouse_genomes_project 17 98354835 98381775 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100246.1 MGP_WSBEiJ_G0038783.1 mouse_genomes_project 17 98357163 98381669 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0044485.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3084173 3196671 + MGP_WSBEiJ_P0044485 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044486.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3084173 3190909 + MGP_WSBEiJ_P0044486 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044487.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3084183 3197506 + MGP_WSBEiJ_P0044487 Synj2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044488.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3084208 3196671 + MGP_WSBEiJ_P0044488 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044489.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3122884 3184404 + MGP_WSBEiJ_P0044489 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044490.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3122939 3202375 + MGP_WSBEiJ_P0044490 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044491.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3123038 3196671 + MGP_WSBEiJ_P0044491 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044492.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3135258 3197457 + MGP_WSBEiJ_P0044492 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044493.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3137338 3202375 + MGP_WSBEiJ_P0044493 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044494.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3143803 3196444 + MGP_WSBEiJ_P0044494 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044495.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3144633 3175739 + MGP_WSBEiJ_P0044495 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044496.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3155682 3191045 + MGP_WSBEiJ_P0044496 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044497.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3155699 3196522 + MGP_WSBEiJ_P0044497 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044498.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3155714 3158592 + Synj2 protein_coding processed_transcript MGP_WSBEiJ_T0044499.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3167369 3196489 + MGP_WSBEiJ_P0044499 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0044500.1 MGP_WSBEiJ_G0022409.1 mouse_genomes_project 17 3183189 3195578 + MGP_WSBEiJ_P0044500 Synj2 protein_coding protein_coding MGP_WSBEiJ_T0046581.1 MGP_WSBEiJ_G0022949.1 mouse_genomes_project 17 35994765 36002531 - MGP_WSBEiJ_P0046581 H2-T24 protein_coding protein_coding MGP_WSBEiJ_T0046582.1 MGP_WSBEiJ_G0022949.1 mouse_genomes_project 17 35995339 36002496 - MGP_WSBEiJ_P0046582 H2-T24 protein_coding protein_coding MGP_WSBEiJ_T0011239.1 MGP_WSBEiJ_G0009396.1 mouse_genomes_project 17 88794763 88795086 + Gm27283 misc_RNA misc_RNA MGP_WSBEiJ_T0006837.1 MGP_WSBEiJ_G0005632.1 mouse_genomes_project 17 33546629 36202181 + lincRNA lincRNA MGP_WSBEiJ_T0006838.1 MGP_WSBEiJ_G0005632.1 mouse_genomes_project 17 33546629 36202180 + lincRNA lincRNA MGP_WSBEiJ_T0045749.1 MGP_WSBEiJ_G0022768.1 mouse_genomes_project 17 30432667 30437009 - MGP_WSBEiJ_P0045749 Tff3 protein_coding protein_coding MGP_WSBEiJ_T0045083.1 MGP_WSBEiJ_G0022617.1 mouse_genomes_project 17 23690479 23694215 - MGP_WSBEiJ_P0045083 Nubp2 protein_coding protein_coding MGP_WSBEiJ_T0012905.1 MGP_WSBEiJ_G0011035.1 mouse_genomes_project 17 9425071 9425365 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046995.1 MGP_WSBEiJ_G0023108.1 mouse_genomes_project 17 48117829 48119019 - MGP_WSBEiJ_P0046995 A330017A19Rik protein_coding protein_coding MGP_WSBEiJ_T0045245.1 MGP_WSBEiJ_G0022651.1 mouse_genomes_project 17 24573658 24577643 + MGP_WSBEiJ_P0045245 Rpusd1 protein_coding protein_coding MGP_WSBEiJ_T0046736.1 MGP_WSBEiJ_G0023026.1 mouse_genomes_project 17 41157294 41187241 - MGP_WSBEiJ_P0046736 protein_coding protein_coding MGP_WSBEiJ_T0010032.1 MGP_WSBEiJ_G0008189.1 mouse_genomes_project 17 27683476 27683537 - Mir6969 miRNA miRNA MGP_WSBEiJ_T0047723.1 MGP_WSBEiJ_G0023362.1 mouse_genomes_project 17 89742819 89750332 - MGP_WSBEiJ_P0047723 Gm10309 protein_coding protein_coding MGP_WSBEiJ_T0003655.1 MGP_WSBEiJ_G0003297.1 mouse_genomes_project 17 27020816 27026521 - Gm15597 antisense antisense MGP_WSBEiJ_T0047708.1 MGP_WSBEiJ_G0023355.1 mouse_genomes_project 17 88179921 88225665 + MGP_WSBEiJ_P0047708 Slc3a1 protein_coding protein_coding MGP_WSBEiJ_T0045263.1 MGP_WSBEiJ_G0022656.1 mouse_genomes_project 17 24635240 24639170 + MGP_WSBEiJ_P0045263 Ccdc78 protein_coding protein_coding MGP_WSBEiJ_T0045264.1 MGP_WSBEiJ_G0022656.1 mouse_genomes_project 17 24635276 24638886 + MGP_WSBEiJ_P0045264 Ccdc78 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044698.1 MGP_WSBEiJ_G0022473.1 mouse_genomes_project 17 13042523 13061294 - MGP_WSBEiJ_P0044698 Phf10 protein_coding protein_coding MGP_WSBEiJ_T0044699.1 MGP_WSBEiJ_G0022473.1 mouse_genomes_project 17 13042528 13044343 - Phf10 protein_coding retained_intron MGP_WSBEiJ_T0044700.1 MGP_WSBEiJ_G0022473.1 mouse_genomes_project 17 13044080 13050215 - Phf10 protein_coding retained_intron MGP_WSBEiJ_T0044701.1 MGP_WSBEiJ_G0022473.1 mouse_genomes_project 17 13045252 13061294 - MGP_WSBEiJ_P0044701 Phf10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044702.1 MGP_WSBEiJ_G0022473.1 mouse_genomes_project 17 13055733 13059548 - Phf10 protein_coding retained_intron MGP_WSBEiJ_T0047586.1 MGP_WSBEiJ_G0023302.1 mouse_genomes_project 17 77434374 77579827 + MGP_WSBEiJ_P0047586 Ttc27 protein_coding protein_coding MGP_WSBEiJ_T0047661.1 MGP_WSBEiJ_G0023338.1 mouse_genomes_project 17 83917178 83977441 + MGP_WSBEiJ_P0047661 Tmem178 protein_coding protein_coding MGP_WSBEiJ_T0046086.1 MGP_WSBEiJ_G0022848.1 mouse_genomes_project 17 33782468 33783984 - Psmb9 protein_coding retained_intron MGP_WSBEiJ_T0046087.1 MGP_WSBEiJ_G0022848.1 mouse_genomes_project 17 33782471 33789527 - Psmb9 protein_coding retained_intron MGP_WSBEiJ_T0046088.1 MGP_WSBEiJ_G0022848.1 mouse_genomes_project 17 33782474 33789483 - MGP_WSBEiJ_P0046088 Psmb9 protein_coding protein_coding MGP_WSBEiJ_T0046089.1 MGP_WSBEiJ_G0022848.1 mouse_genomes_project 17 33784464 33789512 - Psmb9 protein_coding retained_intron MGP_WSBEiJ_T0046090.1 MGP_WSBEiJ_G0022848.1 mouse_genomes_project 17 33784716 33789393 - MGP_WSBEiJ_P0046090 Psmb9 protein_coding protein_coding MGP_WSBEiJ_T0044996.1 MGP_WSBEiJ_G0022592.1 mouse_genomes_project 17 23248761 23254281 - MGP_WSBEiJ_P0044996 Mlst8 protein_coding protein_coding MGP_WSBEiJ_T0044997.1 MGP_WSBEiJ_G0022592.1 mouse_genomes_project 17 23248761 23254281 - MGP_WSBEiJ_P0044997 Mlst8 protein_coding protein_coding MGP_WSBEiJ_T0010013.1 MGP_WSBEiJ_G0008170.1 mouse_genomes_project 17 19770968 19771078 - Gm26384 miRNA miRNA MGP_WSBEiJ_T0047141.1 MGP_WSBEiJ_G0023146.1 mouse_genomes_project 17 49851897 49865480 + MGP_WSBEiJ_P0047141 Unc5cl protein_coding protein_coding MGP_WSBEiJ_T0047142.1 MGP_WSBEiJ_G0023146.1 mouse_genomes_project 17 49859369 49865474 + MGP_WSBEiJ_P0047142 Unc5cl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047143.1 MGP_WSBEiJ_G0023146.1 mouse_genomes_project 17 49859394 49948682 + MGP_WSBEiJ_P0047143 Unc5cl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047144.1 MGP_WSBEiJ_G0023146.1 mouse_genomes_project 17 49859400 49861829 + MGP_WSBEiJ_P0047144 Unc5cl protein_coding protein_coding MGP_WSBEiJ_T0047145.1 MGP_WSBEiJ_G0023146.1 mouse_genomes_project 17 49859418 49865472 + MGP_WSBEiJ_P0047145 Unc5cl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047146.1 MGP_WSBEiJ_G0023146.1 mouse_genomes_project 17 49859438 49948575 + MGP_WSBEiJ_P0047146 Unc5cl protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010042.1 MGP_WSBEiJ_G0008199.1 mouse_genomes_project 17 34996442 34996520 + Mir6973a miRNA miRNA MGP_WSBEiJ_T0099244.1 MGP_WSBEiJ_G0037907.1 mouse_genomes_project 17 37107166 37107293 - Gm25973 snoRNA snoRNA MGP_WSBEiJ_T0046665.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37330612 37360147 + MGP_WSBEiJ_P0046665 Gabbr1 protein_coding protein_coding MGP_WSBEiJ_T0046666.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37330666 37359370 + MGP_WSBEiJ_P0046666 Gabbr1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046667.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37330675 37334117 + MGP_WSBEiJ_P0046667 Gabbr1 protein_coding protein_coding MGP_WSBEiJ_T0046668.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37330846 37331488 + Gabbr1 protein_coding retained_intron MGP_WSBEiJ_T0046669.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37331215 37334117 + MGP_WSBEiJ_P0046669 Gabbr1 protein_coding protein_coding MGP_WSBEiJ_T0046670.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37333227 37335777 + Gabbr1 protein_coding processed_transcript MGP_WSBEiJ_T0046671.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37335280 37359384 + MGP_WSBEiJ_P0046671 Gabbr1 protein_coding protein_coding MGP_WSBEiJ_T0046672.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37335323 37341012 + MGP_WSBEiJ_P0046672 Gabbr1 protein_coding protein_coding MGP_WSBEiJ_T0046673.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37340366 37341519 + Gabbr1 protein_coding retained_intron MGP_WSBEiJ_T0046674.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37347635 37349509 + Gabbr1 protein_coding retained_intron MGP_WSBEiJ_T0046675.1 MGP_WSBEiJ_G0022974.1 mouse_genomes_project 17 37355546 37357318 + Gabbr1 protein_coding retained_intron MGP_WSBEiJ_T0100609.1 MGP_WSBEiJ_G0039067.1 mouse_genomes_project 17 16714310 16715592 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045315.1 MGP_WSBEiJ_G0022668.1 mouse_genomes_project 17 24727910 24729608 + MGP_WSBEiJ_P0045315 Mettl26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045316.1 MGP_WSBEiJ_G0022668.1 mouse_genomes_project 17 24727946 24729617 + MGP_WSBEiJ_P0045316 Mettl26 protein_coding protein_coding MGP_WSBEiJ_T0045317.1 MGP_WSBEiJ_G0022668.1 mouse_genomes_project 17 24727947 24729617 + MGP_WSBEiJ_P0045317 Mettl26 protein_coding protein_coding MGP_WSBEiJ_T0045318.1 MGP_WSBEiJ_G0022668.1 mouse_genomes_project 17 24727976 24738272 + MGP_WSBEiJ_P0045318 Mettl26 protein_coding protein_coding MGP_WSBEiJ_T0045319.1 MGP_WSBEiJ_G0022668.1 mouse_genomes_project 17 24727976 24729445 + MGP_WSBEiJ_P0045319 Mettl26 protein_coding protein_coding MGP_WSBEiJ_T0044466.1 MGP_WSBEiJ_G0022398.1 mouse_genomes_project 17 17916 25436 - MGP_WSBEiJ_P0044466 protein_coding protein_coding MGP_WSBEiJ_T0046134.1 MGP_WSBEiJ_G0022861.1 mouse_genomes_project 17 34117349 34126755 - MGP_WSBEiJ_P0046134 Btnl4 protein_coding protein_coding MGP_WSBEiJ_T0044618.1 MGP_WSBEiJ_G0022446.1 mouse_genomes_project 17 10134870 10221935 - MGP_WSBEiJ_P0044618 Map3k4 protein_coding protein_coding MGP_WSBEiJ_T0044785.1 MGP_WSBEiJ_G0022511.1 mouse_genomes_project 17 18960218 18961115 + MGP_WSBEiJ_P0044785 Vmn1r225 protein_coding protein_coding MGP_WSBEiJ_T0003702.1 MGP_WSBEiJ_G0003331.1 mouse_genomes_project 17 51368367 51369571 - Gm16554 antisense antisense MGP_WSBEiJ_T0047203.1 MGP_WSBEiJ_G0023165.1 mouse_genomes_project 17 56913630 56914481 + MGP_WSBEiJ_P0047203 protein_coding protein_coding MGP_WSBEiJ_T0047767.1 MGP_WSBEiJ_G0023378.1 mouse_genomes_project 17 91311504 91331494 + MGP_WSBEiJ_P0047767 Msh6 protein_coding protein_coding MGP_WSBEiJ_T0047551.1 MGP_WSBEiJ_G0023292.1 mouse_genomes_project 17 76472455 76500550 + MGP_WSBEiJ_P0047551 Ehd3 protein_coding protein_coding MGP_WSBEiJ_T0046222.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34606998 34617900 - Skiv2l protein_coding retained_intron MGP_WSBEiJ_T0046223.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34607014 34617900 - MGP_WSBEiJ_P0046223 Skiv2l protein_coding protein_coding MGP_WSBEiJ_T0046224.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34607019 34617882 - Skiv2l protein_coding retained_intron MGP_WSBEiJ_T0046225.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34607070 34617888 - Skiv2l protein_coding retained_intron MGP_WSBEiJ_T0046226.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34608303 34608902 - Skiv2l protein_coding retained_intron MGP_WSBEiJ_T0046227.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34608375 34610560 - MGP_WSBEiJ_P0046227 Skiv2l protein_coding protein_coding MGP_WSBEiJ_T0046228.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34609129 34612144 - Skiv2l protein_coding retained_intron MGP_WSBEiJ_T0046229.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34612714 34614881 - Skiv2l protein_coding retained_intron MGP_WSBEiJ_T0046230.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34612791 34614327 - Skiv2l protein_coding retained_intron MGP_WSBEiJ_T0046231.1 MGP_WSBEiJ_G0022878.1 mouse_genomes_project 17 34614209 34617885 - MGP_WSBEiJ_P0046231 Skiv2l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044870.1 MGP_WSBEiJ_G0022555.1 mouse_genomes_project 17 22358200 22359230 - Thoc6 protein_coding retained_intron MGP_WSBEiJ_T0044871.1 MGP_WSBEiJ_G0022555.1 mouse_genomes_project 17 22358204 22364278 - Thoc6 protein_coding retained_intron MGP_WSBEiJ_T0044872.1 MGP_WSBEiJ_G0022555.1 mouse_genomes_project 17 22358204 22364318 - MGP_WSBEiJ_P0044872 Thoc6 protein_coding protein_coding MGP_WSBEiJ_T0044873.1 MGP_WSBEiJ_G0022555.1 mouse_genomes_project 17 22358204 22364278 - MGP_WSBEiJ_P0044873 Thoc6 protein_coding protein_coding MGP_WSBEiJ_T0044874.1 MGP_WSBEiJ_G0022555.1 mouse_genomes_project 17 22358383 22364041 - MGP_WSBEiJ_P0044874 Thoc6 protein_coding protein_coding MGP_WSBEiJ_T0044875.1 MGP_WSBEiJ_G0022555.1 mouse_genomes_project 17 22358383 22364265 - MGP_WSBEiJ_P0044875 Thoc6 protein_coding protein_coding MGP_WSBEiJ_T0044876.1 MGP_WSBEiJ_G0022555.1 mouse_genomes_project 17 22358786 22360095 - MGP_WSBEiJ_P0044876 Thoc6 protein_coding protein_coding MGP_WSBEiJ_T0044877.1 MGP_WSBEiJ_G0022555.1 mouse_genomes_project 17 22359907 22364307 - MGP_WSBEiJ_P0044877 Thoc6 protein_coding protein_coding MGP_WSBEiJ_T0098000.1 MGP_WSBEiJ_G0036663.1 mouse_genomes_project 17 46725639 46725721 + Gm25008 snRNA snRNA MGP_WSBEiJ_T0096796.1 MGP_WSBEiJ_G0035477.1 mouse_genomes_project 17 37956926 37957890 - pseudogene pseudogene MGP_WSBEiJ_T0044856.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22281598 22293287 + MGP_WSBEiJ_P0044856 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044857.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22281598 22293294 + MGP_WSBEiJ_P0044857 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044858.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22281598 22293287 + MGP_WSBEiJ_P0044858 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044859.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22281604 22293097 + MGP_WSBEiJ_P0044859 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044860.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22281604 22293097 + MGP_WSBEiJ_P0044860 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044861.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22281683 22291976 + MGP_WSBEiJ_P0044861 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044862.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22287746 22289440 + Zscan10 protein_coding retained_intron MGP_WSBEiJ_T0044863.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22287770 22291972 + MGP_WSBEiJ_P0044863 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044864.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22287779 22291972 + MGP_WSBEiJ_P0044864 Zscan10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044865.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22287779 22291973 + MGP_WSBEiJ_P0044865 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044866.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22287780 22291973 + MGP_WSBEiJ_P0044866 Zscan10 protein_coding protein_coding MGP_WSBEiJ_T0044867.1 MGP_WSBEiJ_G0022552.1 mouse_genomes_project 17 22289759 22291972 + Zscan10 protein_coding retained_intron MGP_WSBEiJ_T0012958.1 MGP_WSBEiJ_G0011088.1 mouse_genomes_project 17 56160846 56160987 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046699.1 MGP_WSBEiJ_G0022996.1 mouse_genomes_project 17 37956922 38001768 - MGP_WSBEiJ_P0046699 Olfr116 protein_coding protein_coding MGP_WSBEiJ_T0010027.1 MGP_WSBEiJ_G0008184.1 mouse_genomes_project 17 26312914 26312975 - Mir7214 miRNA miRNA MGP_WSBEiJ_T0046024.1 MGP_WSBEiJ_G0022835.1 mouse_genomes_project 17 33494020 33496585 - MGP_WSBEiJ_P0046024 B3galt4 protein_coding protein_coding MGP_WSBEiJ_T0012963.1 MGP_WSBEiJ_G0011093.1 mouse_genomes_project 17 65806603 65807163 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044884.1 MGP_WSBEiJ_G0022559.1 mouse_genomes_project 17 22373031 22374466 - MGP_WSBEiJ_P0044884 Cldn9 protein_coding protein_coding MGP_WSBEiJ_T0046732.1 MGP_WSBEiJ_G0023022.1 mouse_genomes_project 17 39620861 39624205 - MGP_WSBEiJ_P0046732 Esp23 protein_coding protein_coding MGP_WSBEiJ_T0045443.1 MGP_WSBEiJ_G0022695.1 mouse_genomes_project 17 25789531 25792460 - MGP_WSBEiJ_P0045443 Nkx2-5 protein_coding protein_coding MGP_WSBEiJ_T0046282.1 MGP_WSBEiJ_G0022890.1 mouse_genomes_project 17 34753423 34760601 + MGP_WSBEiJ_P0046282 Hspa1l protein_coding protein_coding MGP_WSBEiJ_T0100621.1 MGP_WSBEiJ_G0039079.1 mouse_genomes_project 17 19438900 19439324 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0044818.1 MGP_WSBEiJ_G0022535.1 mouse_genomes_project 17 20212613 20231662 + MGP_WSBEiJ_P0044818 Zfp760 protein_coding protein_coding MGP_WSBEiJ_T0016966.1 MGP_WSBEiJ_G0014763.1 mouse_genomes_project 17 24776173 24793987 + Gm16278 processed_transcript processed_transcript MGP_WSBEiJ_T0044551.1 MGP_WSBEiJ_G0022428.1 mouse_genomes_project 17 5540681 5614124 - MGP_WSBEiJ_P0044551 protein_coding protein_coding MGP_WSBEiJ_T0100663.1 MGP_WSBEiJ_G0039121.1 mouse_genomes_project 17 37624736 37626194 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0003673.1 MGP_WSBEiJ_G0003308.1 mouse_genomes_project 17 33547042 36339296 + antisense antisense MGP_WSBEiJ_T0045546.1 MGP_WSBEiJ_G0022722.1 mouse_genomes_project 17 27285511 27311279 + MGP_WSBEiJ_P0045546 Def6 protein_coding protein_coding MGP_WSBEiJ_T0045547.1 MGP_WSBEiJ_G0022722.1 mouse_genomes_project 17 27285570 27291589 + Def6 protein_coding processed_transcript MGP_WSBEiJ_T0046640.1 MGP_WSBEiJ_G0022969.1 mouse_genomes_project 17 37234248 37242349 + MGP_WSBEiJ_P0046640 Znrd1as protein_coding protein_coding MGP_WSBEiJ_T0046641.1 MGP_WSBEiJ_G0022969.1 mouse_genomes_project 17 37234275 37241647 + Znrd1as protein_coding retained_intron MGP_WSBEiJ_T0046642.1 MGP_WSBEiJ_G0022969.1 mouse_genomes_project 17 37234297 37242349 + MGP_WSBEiJ_P0046642 Znrd1as protein_coding protein_coding MGP_WSBEiJ_T0045605.1 MGP_WSBEiJ_G0022733.1 mouse_genomes_project 17 27715064 27754135 - MGP_WSBEiJ_P0045605 Srpk1 protein_coding protein_coding MGP_WSBEiJ_T0045606.1 MGP_WSBEiJ_G0022733.1 mouse_genomes_project 17 27718381 27737551 - MGP_WSBEiJ_P0045606 Srpk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045607.1 MGP_WSBEiJ_G0022733.1 mouse_genomes_project 17 27718780 27721218 - Srpk1 protein_coding retained_intron MGP_WSBEiJ_T0045608.1 MGP_WSBEiJ_G0022733.1 mouse_genomes_project 17 27724241 27731305 - Srpk1 protein_coding retained_intron MGP_WSBEiJ_T0045609.1 MGP_WSBEiJ_G0022733.1 mouse_genomes_project 17 27730754 27731683 - Srpk1 protein_coding retained_intron MGP_WSBEiJ_T0045610.1 MGP_WSBEiJ_G0022733.1 mouse_genomes_project 17 27732965 27754065 - Srpk1 protein_coding retained_intron MGP_WSBEiJ_T0045611.1 MGP_WSBEiJ_G0022733.1 mouse_genomes_project 17 27751758 27754086 - MGP_WSBEiJ_P0045611 Srpk1 protein_coding protein_coding MGP_WSBEiJ_T0044983.1 MGP_WSBEiJ_G0022587.1 mouse_genomes_project 17 23184978 23195946 + MGP_WSBEiJ_P0044983 Rnps1 protein_coding protein_coding MGP_WSBEiJ_T0044984.1 MGP_WSBEiJ_G0022587.1 mouse_genomes_project 17 23184978 23195946 + MGP_WSBEiJ_P0044984 Rnps1 protein_coding protein_coding MGP_WSBEiJ_T0044985.1 MGP_WSBEiJ_G0022587.1 mouse_genomes_project 17 23184978 23195946 + MGP_WSBEiJ_P0044985 Rnps1 protein_coding protein_coding MGP_WSBEiJ_T0010039.1 MGP_WSBEiJ_G0008196.1 mouse_genomes_project 17 34609582 34609645 - Mir6971 miRNA miRNA MGP_WSBEiJ_T0047632.1 MGP_WSBEiJ_G0023322.1 mouse_genomes_project 17 82494620 82496619 + MGP_WSBEiJ_P0047632 4921513D11Rik protein_coding protein_coding MGP_WSBEiJ_T0096798.1 MGP_WSBEiJ_G0035479.1 mouse_genomes_project 17 83696471 83696863 + pseudogene pseudogene MGP_WSBEiJ_T0100641.1 MGP_WSBEiJ_G0039099.1 mouse_genomes_project 17 35930480 35935152 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046762.1 MGP_WSBEiJ_G0023044.1 mouse_genomes_project 17 44256519 44311669 + MGP_WSBEiJ_P0046762 Adgrf1 protein_coding protein_coding MGP_WSBEiJ_T0044815.1 MGP_WSBEiJ_G0022532.1 mouse_genomes_project 17 20187077 20192231 + MGP_WSBEiJ_P0044815 Zfp983 protein_coding protein_coding MGP_WSBEiJ_T0047646.1 MGP_WSBEiJ_G0023328.1 mouse_genomes_project 17 83122279 83132533 + MGP_WSBEiJ_P0047646 Ttc39d protein_coding protein_coding MGP_WSBEiJ_T0047647.1 MGP_WSBEiJ_G0023328.1 mouse_genomes_project 17 83130510 83132532 + MGP_WSBEiJ_P0047647 Ttc39d protein_coding protein_coding MGP_WSBEiJ_T0046768.1 MGP_WSBEiJ_G0023047.1 mouse_genomes_project 17 44537401 44547494 - MGP_WSBEiJ_P0046768 Ankrd66 protein_coding protein_coding MGP_WSBEiJ_T0045835.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31756612 31783908 - MGP_WSBEiJ_P0045835 Wiz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045836.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31756613 31784401 - MGP_WSBEiJ_P0045836 Wiz protein_coding unknown_likely_coding MGP_WSBEiJ_T0045837.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31756614 31784149 - MGP_WSBEiJ_P0045837 Wiz protein_coding protein_coding MGP_WSBEiJ_T0045838.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31756618 31783081 - MGP_WSBEiJ_P0045838 Wiz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045839.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31757206 31765524 - MGP_WSBEiJ_P0045839 Wiz protein_coding protein_coding MGP_WSBEiJ_T0045840.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31757581 31783023 - MGP_WSBEiJ_P0045840 Wiz protein_coding protein_coding MGP_WSBEiJ_T0045841.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31764235 31767024 - Wiz protein_coding processed_transcript MGP_WSBEiJ_T0045842.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31764374 31771803 - Wiz protein_coding retained_intron MGP_WSBEiJ_T0045843.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31764469 31783850 - MGP_WSBEiJ_P0045843 Wiz protein_coding protein_coding MGP_WSBEiJ_T0045844.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31769415 31783990 - Wiz protein_coding retained_intron MGP_WSBEiJ_T0045845.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31770455 31784214 - MGP_WSBEiJ_P0045845 Wiz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045846.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31771689 31784019 - MGP_WSBEiJ_P0045846 Wiz protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045847.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31771803 31783081 - Wiz protein_coding retained_intron MGP_WSBEiJ_T0045848.1 MGP_WSBEiJ_G0022790.1 mouse_genomes_project 17 31782836 31784380 - MGP_WSBEiJ_P0045848 Wiz protein_coding protein_coding MGP_WSBEiJ_T0045001.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23286321 23306722 - MGP_WSBEiJ_P0045001 Traf7 protein_coding protein_coding MGP_WSBEiJ_T0045002.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23286607 23290245 - Traf7 protein_coding retained_intron MGP_WSBEiJ_T0045003.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23286607 23296940 - MGP_WSBEiJ_P0045003 Traf7 protein_coding protein_coding MGP_WSBEiJ_T0045004.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23286607 23306634 - MGP_WSBEiJ_P0045004 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045005.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23286607 23306674 - MGP_WSBEiJ_P0045005 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045006.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23286607 23296940 - MGP_WSBEiJ_P0045006 Traf7 protein_coding protein_coding MGP_WSBEiJ_T0045007.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23286607 23306630 - MGP_WSBEiJ_P0045007 Traf7 protein_coding protein_coding MGP_WSBEiJ_T0045008.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23286611 23288790 - Traf7 protein_coding retained_intron MGP_WSBEiJ_T0045009.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23287819 23288269 - Traf7 protein_coding retained_intron MGP_WSBEiJ_T0045010.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23287970 23290129 - Traf7 protein_coding retained_intron MGP_WSBEiJ_T0045011.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23288242 23290324 - Traf7 protein_coding retained_intron MGP_WSBEiJ_T0045012.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23289353 23291064 - MGP_WSBEiJ_P0045012 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045013.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23289444 23292464 - MGP_WSBEiJ_P0045013 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045014.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23290003 23306647 - MGP_WSBEiJ_P0045014 Traf7 protein_coding protein_coding MGP_WSBEiJ_T0045015.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23290356 23290963 - Traf7 protein_coding retained_intron MGP_WSBEiJ_T0045016.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23290783 23306273 - MGP_WSBEiJ_P0045016 Traf7 protein_coding protein_coding MGP_WSBEiJ_T0045017.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23290966 23306630 - MGP_WSBEiJ_P0045017 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045018.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23290978 23306617 - MGP_WSBEiJ_P0045018 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045019.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23290985 23306695 - MGP_WSBEiJ_P0045019 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045020.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23291061 23306332 - MGP_WSBEiJ_P0045020 Traf7 protein_coding protein_coding MGP_WSBEiJ_T0045021.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23291645 23306630 - MGP_WSBEiJ_P0045021 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045022.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23292444 23306605 - MGP_WSBEiJ_P0045022 Traf7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045023.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23294022 23306634 - Traf7 protein_coding retained_intron MGP_WSBEiJ_T0045024.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23294287 23306652 - Traf7 protein_coding processed_transcript MGP_WSBEiJ_T0045025.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23296103 23306635 - Traf7 protein_coding processed_transcript MGP_WSBEiJ_T0045026.1 MGP_WSBEiJ_G0022595.1 mouse_genomes_project 17 23296304 23306568 - Traf7 protein_coding retained_intron MGP_WSBEiJ_T0006885.1 MGP_WSBEiJ_G0005667.1 mouse_genomes_project 17 88101786 88104530 - 1110020A21Rik lincRNA lincRNA MGP_WSBEiJ_T0046760.1 MGP_WSBEiJ_G0023042.1 mouse_genomes_project 17 43735609 43835831 - MGP_WSBEiJ_P0046760 Cd2ap protein_coding protein_coding MGP_WSBEiJ_T0046811.1 MGP_WSBEiJ_G0023061.1 mouse_genomes_project 17 46619257 46640265 + MGP_WSBEiJ_P0046811 Tcte1 protein_coding protein_coding MGP_WSBEiJ_T0047542.1 MGP_WSBEiJ_G0023289.1 mouse_genomes_project 17 75739341 75799507 + MGP_WSBEiJ_P0047542 Lclat1 protein_coding protein_coding MGP_WSBEiJ_T0047543.1 MGP_WSBEiJ_G0023289.1 mouse_genomes_project 17 75739344 75827780 + MGP_WSBEiJ_P0047543 Lclat1 protein_coding protein_coding MGP_WSBEiJ_T0047544.1 MGP_WSBEiJ_G0023289.1 mouse_genomes_project 17 75739350 75873618 + MGP_WSBEiJ_P0047544 Lclat1 protein_coding protein_coding MGP_WSBEiJ_T0047545.1 MGP_WSBEiJ_G0023289.1 mouse_genomes_project 17 75800540 75870155 + Lclat1 protein_coding processed_transcript MGP_WSBEiJ_T0047546.1 MGP_WSBEiJ_G0023289.1 mouse_genomes_project 17 75835164 75870618 + Lclat1 protein_coding processed_transcript MGP_WSBEiJ_T0044951.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22926194 22958964 - MGP_WSBEiJ_P0044951 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044952.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22926195 22958991 - MGP_WSBEiJ_P0044952 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044953.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22929671 22958944 - MGP_WSBEiJ_P0044953 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044954.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931298 22958948 - MGP_WSBEiJ_P0044954 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044955.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931471 22958943 - MGP_WSBEiJ_P0044955 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044956.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931517 22958960 - MGP_WSBEiJ_P0044956 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044957.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931528 22953380 - MGP_WSBEiJ_P0044957 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044958.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931578 22958925 - MGP_WSBEiJ_P0044958 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044959.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931578 22958952 - MGP_WSBEiJ_P0044959 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044960.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931597 22958943 - MGP_WSBEiJ_P0044960 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044961.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931598 22953380 - MGP_WSBEiJ_P0044961 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044962.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22931745 22958954 - MGP_WSBEiJ_P0044962 Tbc1d24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044963.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22932949 22933773 - Tbc1d24 protein_coding processed_transcript MGP_WSBEiJ_T0044964.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22934147 22958911 - MGP_WSBEiJ_P0044964 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0044965.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22943131 22958948 - Tbc1d24 protein_coding processed_transcript MGP_WSBEiJ_T0044966.1 MGP_WSBEiJ_G0022582.1 mouse_genomes_project 17 22957276 22962820 - MGP_WSBEiJ_P0044966 Tbc1d24 protein_coding protein_coding MGP_WSBEiJ_T0012904.1 MGP_WSBEiJ_G0011034.1 mouse_genomes_project 17 8770737 8770957 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000961.1 MGP_WSBEiJ_G0000896.1 mouse_genomes_project 17 53388791 53390667 + TEC TEC MGP_WSBEiJ_T0012960.1 MGP_WSBEiJ_G0011090.1 mouse_genomes_project 17 56913709 56914085 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044583.1 MGP_WSBEiJ_G0022437.1 mouse_genomes_project 17 6199706 6207595 + MGP_WSBEiJ_P0044583 T protein_coding protein_coding MGP_WSBEiJ_T0044584.1 MGP_WSBEiJ_G0022437.1 mouse_genomes_project 17 6200208 6202091 + MGP_WSBEiJ_P0044584 T protein_coding protein_coding MGP_WSBEiJ_T0044585.1 MGP_WSBEiJ_G0022437.1 mouse_genomes_project 17 6200694 6206841 + MGP_WSBEiJ_P0044585 T protein_coding protein_coding MGP_WSBEiJ_T0047265.1 MGP_WSBEiJ_G0023197.1 mouse_genomes_project 17 58184198 58234679 - MGP_WSBEiJ_P0047265 Ptprs protein_coding protein_coding MGP_WSBEiJ_T0047266.1 MGP_WSBEiJ_G0023197.1 mouse_genomes_project 17 58184200 58251021 - MGP_WSBEiJ_P0047266 Ptprs protein_coding protein_coding MGP_WSBEiJ_T0047267.1 MGP_WSBEiJ_G0023197.1 mouse_genomes_project 17 58194003 58250907 - Ptprs protein_coding processed_transcript MGP_WSBEiJ_T0047268.1 MGP_WSBEiJ_G0023197.1 mouse_genomes_project 17 58196833 58250985 - MGP_WSBEiJ_P0047268 Ptprs protein_coding unknown_likely_coding MGP_WSBEiJ_T0046624.1 MGP_WSBEiJ_G0022963.1 mouse_genomes_project 17 37136579 37144849 + MGP_WSBEiJ_P0046624 Trim10 protein_coding protein_coding MGP_WSBEiJ_T0045470.1 MGP_WSBEiJ_G0022704.1 mouse_genomes_project 17 26108063 26119317 - MGP_WSBEiJ_P0045470 Uqcc2 protein_coding protein_coding MGP_WSBEiJ_T0045471.1 MGP_WSBEiJ_G0022704.1 mouse_genomes_project 17 26108068 26119025 - Uqcc2 protein_coding processed_transcript MGP_WSBEiJ_T0045472.1 MGP_WSBEiJ_G0022704.1 mouse_genomes_project 17 26108070 26119304 - MGP_WSBEiJ_P0045472 Uqcc2 protein_coding protein_coding MGP_WSBEiJ_T0045473.1 MGP_WSBEiJ_G0022704.1 mouse_genomes_project 17 26108070 26119031 - MGP_WSBEiJ_P0045473 Uqcc2 protein_coding protein_coding MGP_WSBEiJ_T0010041.1 MGP_WSBEiJ_G0008198.1 mouse_genomes_project 17 34625268 34625332 - Mir6972 miRNA miRNA MGP_WSBEiJ_T0046713.1 MGP_WSBEiJ_G0023009.1 mouse_genomes_project 17 38506634 38515669 - MGP_WSBEiJ_P0046713 Olfr131 protein_coding protein_coding MGP_WSBEiJ_T0046714.1 MGP_WSBEiJ_G0023009.1 mouse_genomes_project 17 38506634 38507664 - MGP_WSBEiJ_P0046714 Olfr131 protein_coding protein_coding MGP_WSBEiJ_T0100673.1 MGP_WSBEiJ_G0039131.1 mouse_genomes_project 17 38424843 38427857 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0044878.1 MGP_WSBEiJ_G0022556.1 mouse_genomes_project 17 22364031 22365663 + MGP_WSBEiJ_P0044878 Hcfc1r1 protein_coding protein_coding MGP_WSBEiJ_T0044879.1 MGP_WSBEiJ_G0022556.1 mouse_genomes_project 17 22364043 22365663 + MGP_WSBEiJ_P0044879 Hcfc1r1 protein_coding protein_coding MGP_WSBEiJ_T0044880.1 MGP_WSBEiJ_G0022556.1 mouse_genomes_project 17 22364062 22365610 + MGP_WSBEiJ_P0044880 Hcfc1r1 protein_coding protein_coding MGP_WSBEiJ_T0044711.1 MGP_WSBEiJ_G0022477.1 mouse_genomes_project 17 13594993 13613497 - MGP_WSBEiJ_P0044711 Psmb1 protein_coding protein_coding MGP_WSBEiJ_T0097991.1 MGP_WSBEiJ_G0036654.1 mouse_genomes_project 17 30070614 30070718 - Gm24661 snRNA snRNA MGP_WSBEiJ_T0045426.1 MGP_WSBEiJ_G0022692.1 mouse_genomes_project 17 25605553 25629664 + MGP_WSBEiJ_P0045426 Atp6v0e protein_coding protein_coding MGP_WSBEiJ_T0045427.1 MGP_WSBEiJ_G0022692.1 mouse_genomes_project 17 25605569 25627970 + MGP_WSBEiJ_P0045427 Atp6v0e protein_coding protein_coding MGP_WSBEiJ_T0047629.1 MGP_WSBEiJ_G0023319.1 mouse_genomes_project 17 81893133 81932042 + MGP_WSBEiJ_P0047629 Qpct protein_coding protein_coding MGP_WSBEiJ_T0046790.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45551553 45804917 - MGP_WSBEiJ_P0046790 Runx2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046791.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45661955 45892433 - MGP_WSBEiJ_P0046791 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046792.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45661955 45805389 - MGP_WSBEiJ_P0046792 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046793.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45664189 45804451 - MGP_WSBEiJ_P0046793 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046794.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45665456 45892217 - MGP_WSBEiJ_P0046794 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046795.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45665744 45804375 - MGP_WSBEiJ_P0046795 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046796.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45665744 45891862 - MGP_WSBEiJ_P0046796 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046797.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45665830 45892263 - MGP_WSBEiJ_P0046797 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046798.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45665926 45892433 - MGP_WSBEiJ_P0046798 Runx2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046799.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45666240 45804107 - MGP_WSBEiJ_P0046799 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046800.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45695694 45804375 - MGP_WSBEiJ_P0046800 Runx2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046801.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45699575 45803434 - MGP_WSBEiJ_P0046801 Runx2 protein_coding protein_coding MGP_WSBEiJ_T0046802.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45699671 45891900 - MGP_WSBEiJ_P0046802 Runx2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046807.1 MGP_WSBEiJ_G0023056.1 mouse_genomes_project 17 45891541 45892263 - Runx2 protein_coding retained_intron MGP_WSBEiJ_T0047339.1 MGP_WSBEiJ_G0023224.1 mouse_genomes_project 17 58900257 58912720 - MGP_WSBEiJ_P0047339 Dennd1c protein_coding protein_coding MGP_WSBEiJ_T0046716.1 MGP_WSBEiJ_G0023011.1 mouse_genomes_project 17 38578654 38605455 + MGP_WSBEiJ_P0046716 Olfr133 protein_coding protein_coding MGP_WSBEiJ_T0046717.1 MGP_WSBEiJ_G0023011.1 mouse_genomes_project 17 38581762 38583981 + MGP_WSBEiJ_P0046717 Olfr133 protein_coding protein_coding MGP_WSBEiJ_T0047323.1 MGP_WSBEiJ_G0023218.1 mouse_genomes_project 17 58821176 58821738 - MGP_WSBEiJ_P0047323 Pspn protein_coding protein_coding MGP_WSBEiJ_T0046992.1 MGP_WSBEiJ_G0023105.1 mouse_genomes_project 17 47969399 47970172 + MGP_WSBEiJ_P0046992 2310039H08Rik protein_coding protein_coding MGP_WSBEiJ_T0044948.1 MGP_WSBEiJ_G0022581.1 mouse_genomes_project 17 22911219 22915723 - protein_coding processed_transcript MGP_WSBEiJ_T0044949.1 MGP_WSBEiJ_G0022581.1 mouse_genomes_project 17 22911516 22918383 - MGP_WSBEiJ_P0044949 protein_coding protein_coding MGP_WSBEiJ_T0044950.1 MGP_WSBEiJ_G0022581.1 mouse_genomes_project 17 22911783 22918354 - MGP_WSBEiJ_P0044950 protein_coding protein_coding MGP_WSBEiJ_T0045394.1 MGP_WSBEiJ_G0022685.1 mouse_genomes_project 17 25086125 25128138 - MGP_WSBEiJ_P0045394 Fam234a protein_coding protein_coding MGP_WSBEiJ_T0045395.1 MGP_WSBEiJ_G0022685.1 mouse_genomes_project 17 25087016 25128057 - MGP_WSBEiJ_P0045395 Fam234a protein_coding protein_coding MGP_WSBEiJ_T0045396.1 MGP_WSBEiJ_G0022685.1 mouse_genomes_project 17 25087847 25090558 - MGP_WSBEiJ_P0045396 Fam234a protein_coding protein_coding MGP_WSBEiJ_T0045397.1 MGP_WSBEiJ_G0022685.1 mouse_genomes_project 17 25089530 25091280 - Fam234a protein_coding retained_intron MGP_WSBEiJ_T0045398.1 MGP_WSBEiJ_G0022685.1 mouse_genomes_project 17 25092605 25096169 - MGP_WSBEiJ_P0045398 Fam234a protein_coding protein_coding MGP_WSBEiJ_T0047602.1 MGP_WSBEiJ_G0023309.1 mouse_genomes_project 17 81473207 81565268 - MGP_WSBEiJ_P0047602 Strn protein_coding protein_coding MGP_WSBEiJ_T0047603.1 MGP_WSBEiJ_G0023309.1 mouse_genomes_project 17 81492012 81508750 - MGP_WSBEiJ_P0047603 Strn protein_coding protein_coding MGP_WSBEiJ_T0003683.1 MGP_WSBEiJ_G0003317.1 mouse_genomes_project 17 35832164 35837973 - Ppp1r18os antisense antisense MGP_WSBEiJ_T0044827.1 MGP_WSBEiJ_G0022540.1 mouse_genomes_project 17 20502430 20969524 + MGP_WSBEiJ_P0044827 Zfp758 protein_coding protein_coding MGP_WSBEiJ_T0044828.1 MGP_WSBEiJ_G0022540.1 mouse_genomes_project 17 20502430 20969525 + MGP_WSBEiJ_P0044828 Zfp758 protein_coding protein_coding MGP_WSBEiJ_T0044829.1 MGP_WSBEiJ_G0022540.1 mouse_genomes_project 17 20502432 20968501 + MGP_WSBEiJ_P0044829 Zfp758 protein_coding protein_coding MGP_WSBEiJ_T0044831.1 MGP_WSBEiJ_G0022540.1 mouse_genomes_project 17 20502499 20969525 + MGP_WSBEiJ_P0044831 Zfp758 protein_coding protein_coding MGP_WSBEiJ_T0100650.1 MGP_WSBEiJ_G0039108.1 mouse_genomes_project 17 36563977 36566088 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0044767.1 MGP_WSBEiJ_G0022493.1 mouse_genomes_project 17 16239410 16240382 + MGP_WSBEiJ_P0044767 Fpr-rs4 protein_coding protein_coding MGP_WSBEiJ_T0100628.1 MGP_WSBEiJ_G0039086.1 mouse_genomes_project 17 21879441 21911275 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046734.1 MGP_WSBEiJ_G0023024.1 mouse_genomes_project 17 41034516 41036108 - MGP_WSBEiJ_P0046734 Pgk2 protein_coding protein_coding MGP_WSBEiJ_T0096795.1 MGP_WSBEiJ_G0035476.1 mouse_genomes_project 17 37956925 37957890 - pseudogene pseudogene MGP_WSBEiJ_T0012901.1 MGP_WSBEiJ_G0011031.1 mouse_genomes_project 17 6337930 6342512 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045811.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31406382 31433162 + MGP_WSBEiJ_P0045811 Rrp1b protein_coding protein_coding MGP_WSBEiJ_T0045812.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31406685 31418227 + Rrp1b protein_coding retained_intron MGP_WSBEiJ_T0045813.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31406711 31418220 + MGP_WSBEiJ_P0045813 Rrp1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045814.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31418589 31433153 + Rrp1b protein_coding retained_intron MGP_WSBEiJ_T0045815.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31419111 31422105 + Rrp1b protein_coding retained_intron MGP_WSBEiJ_T0045816.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31420323 31421984 + Rrp1b protein_coding retained_intron MGP_WSBEiJ_T0045817.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31422108 31426899 + MGP_WSBEiJ_P0045817 Rrp1b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045818.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31422576 31426912 + Rrp1b protein_coding retained_intron MGP_WSBEiJ_T0045819.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31426215 31427328 + Rrp1b protein_coding processed_transcript MGP_WSBEiJ_T0045820.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31428585 31430870 + Rrp1b protein_coding retained_intron MGP_WSBEiJ_T0045821.1 MGP_WSBEiJ_G0022784.1 mouse_genomes_project 17 31429464 31430963 + Rrp1b protein_coding retained_intron MGP_WSBEiJ_T0047525.1 MGP_WSBEiJ_G0023281.1 mouse_genomes_project 17 74095753 74124760 + MGP_WSBEiJ_P0047525 Spdya protein_coding protein_coding MGP_WSBEiJ_T0047526.1 MGP_WSBEiJ_G0023281.1 mouse_genomes_project 17 74095753 74135538 + MGP_WSBEiJ_P0047526 Spdya protein_coding protein_coding MGP_WSBEiJ_T0047527.1 MGP_WSBEiJ_G0023281.1 mouse_genomes_project 17 74095764 74135538 + MGP_WSBEiJ_P0047527 Spdya protein_coding protein_coding MGP_WSBEiJ_T0047528.1 MGP_WSBEiJ_G0023281.1 mouse_genomes_project 17 74099934 74134679 + MGP_WSBEiJ_P0047528 Spdya protein_coding protein_coding MGP_WSBEiJ_T0097993.1 MGP_WSBEiJ_G0036656.1 mouse_genomes_project 17 33247583 33247659 + Gm22943 snRNA snRNA MGP_WSBEiJ_T0047512.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73856510 73868527 - Smchd1 protein_coding processed_transcript MGP_WSBEiJ_T0047513.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73856510 73989989 - MGP_WSBEiJ_P0047513 Smchd1 protein_coding protein_coding MGP_WSBEiJ_T0047514.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73858530 73861026 - Smchd1 protein_coding retained_intron MGP_WSBEiJ_T0047515.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73860939 73874841 - Smchd1 protein_coding retained_intron MGP_WSBEiJ_T0047516.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73862883 73865423 - Smchd1 protein_coding retained_intron MGP_WSBEiJ_T0047517.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73870013 73874079 - Smchd1 protein_coding retained_intron MGP_WSBEiJ_T0047518.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73902083 73903330 - Smchd1 protein_coding retained_intron MGP_WSBEiJ_T0047519.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73906585 73907405 - Smchd1 protein_coding retained_intron MGP_WSBEiJ_T0047523.1 MGP_WSBEiJ_G0023278.1 mouse_genomes_project 17 73987147 73989974 - Smchd1 protein_coding retained_intron MGP_WSBEiJ_T0047230.1 MGP_WSBEiJ_G0023180.1 mouse_genomes_project 17 57785732 57819254 + MGP_WSBEiJ_P0047230 Chaf1a protein_coding protein_coding MGP_WSBEiJ_T0044471.1 MGP_WSBEiJ_G0022401.1 mouse_genomes_project 17 525340 566412 - MGP_WSBEiJ_P0044471 Tfb1m protein_coding protein_coding MGP_WSBEiJ_T0044627.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10753297 10782171 - MGP_WSBEiJ_P0044627 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0044628.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10753333 10768544 - MGP_WSBEiJ_P0044628 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0044629.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10753333 10768424 - MGP_WSBEiJ_P0044629 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0044630.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10753333 10768544 - MGP_WSBEiJ_P0044630 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0044631.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10753333 10761624 - MGP_WSBEiJ_P0044631 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0044632.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10754422 10765991 - MGP_WSBEiJ_P0044632 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0044633.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10754525 10765977 - MGP_WSBEiJ_P0044633 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0044634.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10754536 10765991 - MGP_WSBEiJ_P0044634 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0044635.1 MGP_WSBEiJ_G0022452.1 mouse_genomes_project 17 10754679 10769106 - MGP_WSBEiJ_P0044635 Mas1 protein_coding protein_coding MGP_WSBEiJ_T0047148.1 MGP_WSBEiJ_G0023148.1 mouse_genomes_project 17 50882694 50903517 + MGP_WSBEiJ_P0047148 Mocs1 protein_coding protein_coding MGP_WSBEiJ_T0047149.1 MGP_WSBEiJ_G0023148.1 mouse_genomes_project 17 50882740 50903520 + MGP_WSBEiJ_P0047149 Mocs1 protein_coding protein_coding MGP_WSBEiJ_T0047150.1 MGP_WSBEiJ_G0023148.1 mouse_genomes_project 17 50882772 50902875 + MGP_WSBEiJ_P0047150 Mocs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047151.1 MGP_WSBEiJ_G0023148.1 mouse_genomes_project 17 50882772 50902875 + MGP_WSBEiJ_P0047151 Mocs1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047152.1 MGP_WSBEiJ_G0023148.1 mouse_genomes_project 17 50887525 50889862 + Mocs1 protein_coding processed_transcript MGP_WSBEiJ_T0047153.1 MGP_WSBEiJ_G0023148.1 mouse_genomes_project 17 50898065 50902353 + MGP_WSBEiJ_P0047153 Mocs1 protein_coding protein_coding MGP_WSBEiJ_T0047154.1 MGP_WSBEiJ_G0023148.1 mouse_genomes_project 17 50900510 50903520 + MGP_WSBEiJ_P0047154 Mocs1 protein_coding protein_coding MGP_WSBEiJ_T0044710.1 MGP_WSBEiJ_G0022476.1 mouse_genomes_project 17 13508501 13545759 + MGP_WSBEiJ_P0044710 Fam120b protein_coding protein_coding MGP_WSBEiJ_T0044637.1 MGP_WSBEiJ_G0022454.1 mouse_genomes_project 17 10803872 10826498 - MGP_WSBEiJ_P0044637 Pnldc1 protein_coding protein_coding MGP_WSBEiJ_T0044638.1 MGP_WSBEiJ_G0022454.1 mouse_genomes_project 17 10803876 10825633 - MGP_WSBEiJ_P0044638 Pnldc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045236.1 MGP_WSBEiJ_G0022649.1 mouse_genomes_project 17 24563124 24565360 + MGP_WSBEiJ_P0045236 Gng13 protein_coding protein_coding MGP_WSBEiJ_T0045237.1 MGP_WSBEiJ_G0022649.1 mouse_genomes_project 17 24563481 24565041 + MGP_WSBEiJ_P0045237 Gng13 protein_coding protein_coding MGP_WSBEiJ_T0046823.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46687035 46701220 - MGP_WSBEiJ_P0046823 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046824.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46687035 46694397 - MGP_WSBEiJ_P0046824 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046825.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46687037 46695493 - MGP_WSBEiJ_P0046825 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046826.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46687038 46697415 - MGP_WSBEiJ_P0046826 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046827.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46687038 46697748 - MGP_WSBEiJ_P0046827 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046828.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46687038 46697417 - MGP_WSBEiJ_P0046828 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046829.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46687377 46694319 - MGP_WSBEiJ_P0046829 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046830.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46687506 46694084 - MGP_WSBEiJ_P0046830 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046831.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46688053 46690562 - Slc29a1 protein_coding processed_transcript MGP_WSBEiJ_T0046832.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46690186 46697347 - MGP_WSBEiJ_P0046832 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046833.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46690187 46697447 - MGP_WSBEiJ_P0046833 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046834.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46690340 46694662 - Slc29a1 protein_coding retained_intron MGP_WSBEiJ_T0046835.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46690688 46691932 - Slc29a1 protein_coding retained_intron MGP_WSBEiJ_T0046836.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691027 46697396 - Slc29a1 protein_coding retained_intron MGP_WSBEiJ_T0046837.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691237 46697360 - Slc29a1 protein_coding retained_intron MGP_WSBEiJ_T0046838.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691237 46701221 - MGP_WSBEiJ_P0046838 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046839.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691337 46697697 - MGP_WSBEiJ_P0046839 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046840.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691343 46695487 - MGP_WSBEiJ_P0046840 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046841.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691517 46701223 - MGP_WSBEiJ_P0046841 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046842.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691542 46697401 - MGP_WSBEiJ_P0046842 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046843.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691592 46697347 - MGP_WSBEiJ_P0046843 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046844.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691777 46697386 - MGP_WSBEiJ_P0046844 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046845.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691843 46697388 - MGP_WSBEiJ_P0046845 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046846.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691889 46697802 - MGP_WSBEiJ_P0046846 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0046847.1 MGP_WSBEiJ_G0023066.1 mouse_genomes_project 17 46691932 46698915 - MGP_WSBEiJ_P0046847 Slc29a1 protein_coding protein_coding MGP_WSBEiJ_T0047655.1 MGP_WSBEiJ_G0023333.1 mouse_genomes_project 17 83305076 83305400 - MGP_WSBEiJ_P0047655 Gm10190 protein_coding protein_coding MGP_WSBEiJ_T0047715.1 MGP_WSBEiJ_G0023359.1 mouse_genomes_project 17 88870025 88873983 - MGP_WSBEiJ_P0047715 Six2 protein_coding protein_coding MGP_WSBEiJ_T0047716.1 MGP_WSBEiJ_G0023359.1 mouse_genomes_project 17 88870030 88873963 - MGP_WSBEiJ_P0047716 Six2 protein_coding protein_coding MGP_WSBEiJ_T0045091.1 MGP_WSBEiJ_G0022619.1 mouse_genomes_project 17 23696334 23702748 - MGP_WSBEiJ_P0045091 Eme2 protein_coding protein_coding MGP_WSBEiJ_T0045092.1 MGP_WSBEiJ_G0022619.1 mouse_genomes_project 17 23699843 23702780 - MGP_WSBEiJ_P0045092 Eme2 protein_coding protein_coding MGP_WSBEiJ_T0045094.1 MGP_WSBEiJ_G0022619.1 mouse_genomes_project 17 23699846 23702752 - MGP_WSBEiJ_P0045094 Eme2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045095.1 MGP_WSBEiJ_G0022619.1 mouse_genomes_project 17 23700171 23702771 - Eme2 protein_coding retained_intron MGP_WSBEiJ_T0045096.1 MGP_WSBEiJ_G0022619.1 mouse_genomes_project 17 23700471 23701877 - Eme2 protein_coding retained_intron MGP_WSBEiJ_T0045097.1 MGP_WSBEiJ_G0022619.1 mouse_genomes_project 17 23700830 23702748 - Eme2 protein_coding retained_intron MGP_WSBEiJ_T0045098.1 MGP_WSBEiJ_G0022619.1 mouse_genomes_project 17 23701053 23702755 - Eme2 protein_coding retained_intron MGP_WSBEiJ_T0045099.1 MGP_WSBEiJ_G0022619.1 mouse_genomes_project 17 23701438 23702718 - Eme2 protein_coding retained_intron MGP_WSBEiJ_T0003693.1 MGP_WSBEiJ_G0003324.1 mouse_genomes_project 17 45774493 45778195 + Runx2os2 antisense antisense MGP_WSBEiJ_T0046344.1 MGP_WSBEiJ_G0022902.1 mouse_genomes_project 17 34867013 34871984 - MGP_WSBEiJ_P0046344 Ly6g6f protein_coding protein_coding MGP_WSBEiJ_T0010064.1 MGP_WSBEiJ_G0008221.1 mouse_genomes_project 17 93724117 93724211 + Gm24510 miRNA miRNA MGP_WSBEiJ_T0006884.1 MGP_WSBEiJ_G0005666.1 mouse_genomes_project 17 86933301 86935839 - C430042M11Rik lincRNA lincRNA MGP_WSBEiJ_T0046720.1 MGP_WSBEiJ_G0023014.1 mouse_genomes_project 17 38700870 38716569 + MGP_WSBEiJ_P0046720 Olfr138 protein_coding protein_coding MGP_WSBEiJ_T0046721.1 MGP_WSBEiJ_G0023014.1 mouse_genomes_project 17 38700871 38717429 + MGP_WSBEiJ_P0046721 Olfr138 protein_coding protein_coding MGP_WSBEiJ_T0046722.1 MGP_WSBEiJ_G0023014.1 mouse_genomes_project 17 38700881 38716859 + MGP_WSBEiJ_P0046722 Olfr138 protein_coding protein_coding MGP_WSBEiJ_T0046723.1 MGP_WSBEiJ_G0023014.1 mouse_genomes_project 17 38716490 38717429 + MGP_WSBEiJ_P0046723 Olfr138 protein_coding protein_coding MGP_WSBEiJ_T0046679.1 MGP_WSBEiJ_G0022978.1 mouse_genomes_project 17 37510339 37512543 + MGP_WSBEiJ_P0046679 Ubd protein_coding protein_coding MGP_WSBEiJ_T0010050.1 MGP_WSBEiJ_G0008207.1 mouse_genomes_project 17 47379162 47379251 + Mir693 miRNA miRNA MGP_WSBEiJ_T0006806.1 MGP_WSBEiJ_G0005608.1 mouse_genomes_project 17 21406543 21441784 - Gm16386 lincRNA lincRNA MGP_WSBEiJ_T0046903.1 MGP_WSBEiJ_G0023078.1 mouse_genomes_project 17 47350694 47390426 + MGP_WSBEiJ_P0046903 Xpo5 protein_coding protein_coding MGP_WSBEiJ_T0046588.1 MGP_WSBEiJ_G0022952.1 mouse_genomes_project 17 36027886 36039710 + MGP_WSBEiJ_P0046588 protein_coding protein_coding MGP_WSBEiJ_T0045399.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25136572 25170782 + MGP_WSBEiJ_P0045399 Luc7l protein_coding protein_coding MGP_WSBEiJ_T0045400.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25136613 25175540 + MGP_WSBEiJ_P0045400 Luc7l protein_coding protein_coding MGP_WSBEiJ_T0045401.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25136618 25167876 + MGP_WSBEiJ_P0045401 Luc7l protein_coding protein_coding MGP_WSBEiJ_T0045402.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25136628 25172019 + MGP_WSBEiJ_P0045402 Luc7l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045403.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25136628 25172017 + MGP_WSBEiJ_P0045403 Luc7l protein_coding protein_coding MGP_WSBEiJ_T0045404.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25136646 25170783 + Luc7l protein_coding retained_intron MGP_WSBEiJ_T0045405.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25136661 25170786 + MGP_WSBEiJ_P0045405 Luc7l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045406.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25136884 25152673 + MGP_WSBEiJ_P0045406 Luc7l protein_coding protein_coding MGP_WSBEiJ_T0045407.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25137047 25137915 + Luc7l protein_coding processed_transcript MGP_WSBEiJ_T0045408.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25137337 25175549 + MGP_WSBEiJ_P0045408 Luc7l protein_coding unknown_likely_coding MGP_WSBEiJ_T0045409.1 MGP_WSBEiJ_G0022686.1 mouse_genomes_project 17 25153554 25171995 + MGP_WSBEiJ_P0045409 Luc7l protein_coding protein_coding MGP_WSBEiJ_T0046487.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35792149 35801746 + MGP_WSBEiJ_P0046487 Flot1 protein_coding protein_coding MGP_WSBEiJ_T0046488.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35792266 35801569 + MGP_WSBEiJ_P0046488 Flot1 protein_coding protein_coding MGP_WSBEiJ_T0046489.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35792301 35798979 + MGP_WSBEiJ_P0046489 Flot1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046490.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35792345 35793310 + Flot1 protein_coding retained_intron MGP_WSBEiJ_T0046491.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35792445 35794654 + MGP_WSBEiJ_P0046491 Flot1 protein_coding protein_coding MGP_WSBEiJ_T0046492.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35792468 35794666 + MGP_WSBEiJ_P0046492 Flot1 protein_coding protein_coding MGP_WSBEiJ_T0046493.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35792512 35794653 + MGP_WSBEiJ_P0046493 Flot1 protein_coding protein_coding MGP_WSBEiJ_T0046494.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35792915 35793840 + Flot1 protein_coding retained_intron MGP_WSBEiJ_T0046495.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35799040 35801585 + Flot1 protein_coding retained_intron MGP_WSBEiJ_T0046496.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35799450 35801599 + Flot1 protein_coding retained_intron MGP_WSBEiJ_T0046497.1 MGP_WSBEiJ_G0022936.1 mouse_genomes_project 17 35799589 35800422 + Flot1 protein_coding retained_intron MGP_WSBEiJ_T0012979.1 MGP_WSBEiJ_G0011109.1 mouse_genomes_project 17 94275182 94276423 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044808.1 MGP_WSBEiJ_G0022527.1 mouse_genomes_project 17 19909974 19922174 + MGP_WSBEiJ_P0044808 Zfp54 protein_coding protein_coding MGP_WSBEiJ_T0044809.1 MGP_WSBEiJ_G0022527.1 mouse_genomes_project 17 19909980 19921688 + MGP_WSBEiJ_P0044809 Zfp54 protein_coding protein_coding MGP_WSBEiJ_T0044810.1 MGP_WSBEiJ_G0022527.1 mouse_genomes_project 17 19910005 19920479 + MGP_WSBEiJ_P0044810 Zfp54 protein_coding protein_coding MGP_WSBEiJ_T0047105.1 MGP_WSBEiJ_G0023136.1 mouse_genomes_project 17 49620274 49635764 + MGP_WSBEiJ_P0047105 Trem3 protein_coding protein_coding MGP_WSBEiJ_T0044817.1 MGP_WSBEiJ_G0022534.1 mouse_genomes_project 17 20194026 20194281 + MGP_WSBEiJ_P0044817 Gm10226 protein_coding protein_coding MGP_WSBEiJ_T0045923.1 MGP_WSBEiJ_G0022817.1 mouse_genomes_project 17 33079680 33132056 + MGP_WSBEiJ_P0045923 Myo1f protein_coding protein_coding MGP_WSBEiJ_T0045924.1 MGP_WSBEiJ_G0022817.1 mouse_genomes_project 17 33079730 33132046 + MGP_WSBEiJ_P0045924 Myo1f protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045925.1 MGP_WSBEiJ_G0022817.1 mouse_genomes_project 17 33079750 33101106 + MGP_WSBEiJ_P0045925 Myo1f protein_coding protein_coding MGP_WSBEiJ_T0045926.1 MGP_WSBEiJ_G0022817.1 mouse_genomes_project 17 33106619 33132052 + Myo1f protein_coding retained_intron MGP_WSBEiJ_T0003698.1 MGP_WSBEiJ_G0003329.1 mouse_genomes_project 17 49006835 49008861 - Frs3os antisense antisense MGP_WSBEiJ_T0003699.1 MGP_WSBEiJ_G0003329.1 mouse_genomes_project 17 49006904 49007694 - Frs3os antisense antisense MGP_WSBEiJ_T0003700.1 MGP_WSBEiJ_G0003329.1 mouse_genomes_project 17 49007187 49008844 - Frs3os antisense antisense MGP_WSBEiJ_T0046851.1 MGP_WSBEiJ_G0023068.1 mouse_genomes_project 17 46740259 46766500 - MGP_WSBEiJ_P0046851 Capn11 protein_coding protein_coding MGP_WSBEiJ_T0046852.1 MGP_WSBEiJ_G0023068.1 mouse_genomes_project 17 46754157 46766472 - MGP_WSBEiJ_P0046852 Capn11 protein_coding non_stop_decay MGP_WSBEiJ_T0099237.1 MGP_WSBEiJ_G0037900.1 mouse_genomes_project 17 24129242 24129379 + Gm25921 snoRNA snoRNA MGP_WSBEiJ_T0045548.1 MGP_WSBEiJ_G0022723.1 mouse_genomes_project 17 27315424 27396056 + MGP_WSBEiJ_P0045548 Ppard protein_coding protein_coding MGP_WSBEiJ_T0045549.1 MGP_WSBEiJ_G0022723.1 mouse_genomes_project 17 27315436 27387694 + Ppard protein_coding retained_intron MGP_WSBEiJ_T0045550.1 MGP_WSBEiJ_G0022723.1 mouse_genomes_project 17 27315452 27391213 + Ppard protein_coding processed_transcript MGP_WSBEiJ_T0045551.1 MGP_WSBEiJ_G0022723.1 mouse_genomes_project 17 27315477 27391291 + Ppard protein_coding retained_intron MGP_WSBEiJ_T0045552.1 MGP_WSBEiJ_G0022723.1 mouse_genomes_project 17 27361879 27363335 + Ppard protein_coding processed_transcript MGP_WSBEiJ_T0045553.1 MGP_WSBEiJ_G0022723.1 mouse_genomes_project 17 27362364 27390068 + MGP_WSBEiJ_P0045553 Ppard protein_coding protein_coding MGP_WSBEiJ_T0012947.1 MGP_WSBEiJ_G0011077.1 mouse_genomes_project 17 38881180 38881310 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044819.1 MGP_WSBEiJ_G0022536.1 mouse_genomes_project 17 20242140 20244542 + Zfp229 protein_coding processed_transcript MGP_WSBEiJ_T0044820.1 MGP_WSBEiJ_G0022536.1 mouse_genomes_project 17 20242173 20243378 + Zfp229 protein_coding processed_transcript MGP_WSBEiJ_T0044821.1 MGP_WSBEiJ_G0022536.1 mouse_genomes_project 17 20242184 20257161 + MGP_WSBEiJ_P0044821 Zfp229 protein_coding protein_coding MGP_WSBEiJ_T0044822.1 MGP_WSBEiJ_G0022536.1 mouse_genomes_project 17 20242184 20277375 + MGP_WSBEiJ_P0044822 Zfp229 protein_coding protein_coding MGP_WSBEiJ_T0044823.1 MGP_WSBEiJ_G0022536.1 mouse_genomes_project 17 20244372 20257162 + MGP_WSBEiJ_P0044823 Zfp229 protein_coding protein_coding MGP_WSBEiJ_T0047758.1 MGP_WSBEiJ_G0023374.1 mouse_genomes_project 17 90959886 90977802 + MGP_WSBEiJ_P0047758 Epcam protein_coding protein_coding MGP_WSBEiJ_T0047558.1 MGP_WSBEiJ_G0023298.1 mouse_genomes_project 17 77083492 77114068 + MGP_WSBEiJ_P0047558 Slc30a6 protein_coding protein_coding MGP_WSBEiJ_T0047559.1 MGP_WSBEiJ_G0023298.1 mouse_genomes_project 17 77083492 77114068 + MGP_WSBEiJ_P0047559 Slc30a6 protein_coding protein_coding MGP_WSBEiJ_T0046962.1 MGP_WSBEiJ_G0023094.1 mouse_genomes_project 17 47813537 47829779 - MGP_WSBEiJ_P0046962 Klc4 protein_coding protein_coding MGP_WSBEiJ_T0016967.1 MGP_WSBEiJ_G0014764.1 mouse_genomes_project 17 28773495 28903927 + Gm28052 processed_transcript processed_transcript MGP_WSBEiJ_T0016968.1 MGP_WSBEiJ_G0014765.1 mouse_genomes_project 17 29138482 29145457 + Gm16758 processed_transcript processed_transcript MGP_WSBEiJ_T0046156.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311450 34314535 + MGP_WSBEiJ_P0046156 Ager protein_coding protein_coding MGP_WSBEiJ_T0046157.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311450 34314531 + MGP_WSBEiJ_P0046157 Ager protein_coding protein_coding MGP_WSBEiJ_T0046158.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311463 34314506 + Ager protein_coding processed_transcript MGP_WSBEiJ_T0046159.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311463 34314506 + Ager protein_coding retained_intron MGP_WSBEiJ_T0046160.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314459 + Ager protein_coding retained_intron MGP_WSBEiJ_T0046161.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314459 + Ager protein_coding retained_intron MGP_WSBEiJ_T0046162.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314459 + Ager protein_coding retained_intron MGP_WSBEiJ_T0046163.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314495 + Ager protein_coding retained_intron MGP_WSBEiJ_T0046164.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314459 + Ager protein_coding retained_intron MGP_WSBEiJ_T0046165.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314459 + Ager protein_coding retained_intron MGP_WSBEiJ_T0046166.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314459 + Ager protein_coding retained_intron MGP_WSBEiJ_T0046167.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314495 + MGP_WSBEiJ_P0046167 Ager protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046168.1 MGP_WSBEiJ_G0022866.1 mouse_genomes_project 17 34311482 34314495 + MGP_WSBEiJ_P0046168 Ager protein_coding protein_coding MGP_WSBEiJ_T0099233.1 MGP_WSBEiJ_G0037896.1 mouse_genomes_project 17 22756769 22756898 - Gm25092 snoRNA snoRNA MGP_WSBEiJ_T0010059.1 MGP_WSBEiJ_G0008216.1 mouse_genomes_project 17 66579611 66579713 + Mir6420 miRNA miRNA MGP_WSBEiJ_T0006847.1 MGP_WSBEiJ_G0005641.1 mouse_genomes_project 17 35977868 35979746 + Gm20508 lincRNA lincRNA MGP_WSBEiJ_T0047554.1 MGP_WSBEiJ_G0023295.1 mouse_genomes_project 17 76873936 76976277 - MGP_WSBEiJ_P0047554 Memo1 protein_coding protein_coding MGP_WSBEiJ_T0045281.1 MGP_WSBEiJ_G0022662.1 mouse_genomes_project 17 24679327 24682053 - MGP_WSBEiJ_P0045281 Stub1 protein_coding protein_coding MGP_WSBEiJ_T0044773.1 MGP_WSBEiJ_G0022499.1 mouse_genomes_project 17 16449430 16485725 - MGP_WSBEiJ_P0044773 Vmn2r94 protein_coding protein_coding MGP_WSBEiJ_T0046172.1 MGP_WSBEiJ_G0022868.1 mouse_genomes_project 17 34317863 34326889 + MGP_WSBEiJ_P0046172 Agpat1 protein_coding protein_coding MGP_WSBEiJ_T0046173.1 MGP_WSBEiJ_G0022868.1 mouse_genomes_project 17 34318445 34326586 + MGP_WSBEiJ_P0046173 Agpat1 protein_coding protein_coding MGP_WSBEiJ_T0046174.1 MGP_WSBEiJ_G0022868.1 mouse_genomes_project 17 34319464 34327635 + MGP_WSBEiJ_P0046174 Agpat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046175.1 MGP_WSBEiJ_G0022868.1 mouse_genomes_project 17 34319464 34330336 + MGP_WSBEiJ_P0046175 Agpat1 protein_coding protein_coding MGP_WSBEiJ_T0046176.1 MGP_WSBEiJ_G0022868.1 mouse_genomes_project 17 34319576 34328083 + MGP_WSBEiJ_P0046176 Agpat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046177.1 MGP_WSBEiJ_G0022868.1 mouse_genomes_project 17 34322617 34330335 + MGP_WSBEiJ_P0046177 Agpat1 protein_coding protein_coding MGP_WSBEiJ_T0046178.1 MGP_WSBEiJ_G0022868.1 mouse_genomes_project 17 34323218 34330305 + MGP_WSBEiJ_P0046178 Agpat1 protein_coding protein_coding MGP_WSBEiJ_T0046179.1 MGP_WSBEiJ_G0022868.1 mouse_genomes_project 17 34323891 34326367 + Agpat1 protein_coding retained_intron MGP_WSBEiJ_T0100615.1 MGP_WSBEiJ_G0039073.1 mouse_genomes_project 17 18410956 18411887 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047751.1 MGP_WSBEiJ_G0023372.1 mouse_genomes_project 17 90686928 90733075 - MGP_WSBEiJ_P0047751 1700011E24Rik protein_coding protein_coding MGP_WSBEiJ_T0047752.1 MGP_WSBEiJ_G0023372.1 mouse_genomes_project 17 90686933 90733021 - MGP_WSBEiJ_P0047752 1700011E24Rik protein_coding protein_coding MGP_WSBEiJ_T0047753.1 MGP_WSBEiJ_G0023372.1 mouse_genomes_project 17 90711484 90733042 - MGP_WSBEiJ_P0047753 1700011E24Rik protein_coding protein_coding MGP_WSBEiJ_T0047754.1 MGP_WSBEiJ_G0023372.1 mouse_genomes_project 17 90718938 90732969 - 1700011E24Rik protein_coding processed_transcript MGP_WSBEiJ_T0047755.1 MGP_WSBEiJ_G0023372.1 mouse_genomes_project 17 90718948 90732969 - 1700011E24Rik protein_coding processed_transcript MGP_WSBEiJ_T0012954.1 MGP_WSBEiJ_G0011084.1 mouse_genomes_project 17 55403927 55404928 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047653.1 MGP_WSBEiJ_G0023332.1 mouse_genomes_project 17 83232663 83305670 + MGP_WSBEiJ_P0047653 Arhgef33 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047654.1 MGP_WSBEiJ_G0023332.1 mouse_genomes_project 17 83232786 83321173 + MGP_WSBEiJ_P0047654 Arhgef33 protein_coding protein_coding MGP_WSBEiJ_T0003681.1 MGP_WSBEiJ_G0003315.1 mouse_genomes_project 17 35616186 35624702 + Gm20483 antisense antisense MGP_WSBEiJ_T0046030.1 MGP_WSBEiJ_G0022837.1 mouse_genomes_project 17 33523154 33547904 - MGP_WSBEiJ_P0046030 H2-K1 protein_coding protein_coding MGP_WSBEiJ_T0010051.1 MGP_WSBEiJ_G0008208.1 mouse_genomes_project 17 47726749 47726812 - Mir6976 miRNA miRNA MGP_WSBEiJ_T0046975.1 MGP_WSBEiJ_G0023097.1 mouse_genomes_project 17 47853201 47859257 - MGP_WSBEiJ_P0046975 Rrp36 protein_coding protein_coding MGP_WSBEiJ_T0100660.1 MGP_WSBEiJ_G0039118.1 mouse_genomes_project 17 37245921 37248109 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0100655.1 MGP_WSBEiJ_G0039113.1 mouse_genomes_project 17 36777120 36780785 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046119.1 MGP_WSBEiJ_G0022857.1 mouse_genomes_project 17 33927245 33943920 + MGP_WSBEiJ_P0046119 H2-Eb2 protein_coding protein_coding MGP_WSBEiJ_T0046690.1 MGP_WSBEiJ_G0022988.1 mouse_genomes_project 17 37801995 37803033 + MGP_WSBEiJ_P0046690 protein_coding protein_coding MGP_WSBEiJ_T0044539.1 MGP_WSBEiJ_G0022421.1 mouse_genomes_project 17 4825273 4826721 - MGP_WSBEiJ_P0044539 Ttll2 protein_coding protein_coding MGP_WSBEiJ_T0045345.1 MGP_WSBEiJ_G0022672.1 mouse_genomes_project 17 24800475 24803858 - MGP_WSBEiJ_P0045345 Nhlrc4 protein_coding protein_coding MGP_WSBEiJ_T0045346.1 MGP_WSBEiJ_G0022672.1 mouse_genomes_project 17 24802394 24803887 - Nhlrc4 protein_coding processed_transcript MGP_WSBEiJ_T0045347.1 MGP_WSBEiJ_G0022672.1 mouse_genomes_project 17 24802482 24803757 - Nhlrc4 protein_coding processed_transcript MGP_WSBEiJ_T0100634.1 MGP_WSBEiJ_G0039092.1 mouse_genomes_project 17 33999659 34007685 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047147.1 MGP_WSBEiJ_G0023147.1 mouse_genomes_project 17 50360399 50534942 + MGP_WSBEiJ_P0047147 Lrfn2 protein_coding protein_coding MGP_WSBEiJ_T0044545.1 MGP_WSBEiJ_G0022423.1 mouse_genomes_project 17 5389667 5399200 + MGP_WSBEiJ_P0044545 protein_coding protein_coding MGP_WSBEiJ_T0010058.1 MGP_WSBEiJ_G0008215.1 mouse_genomes_project 17 66460255 66460342 - Gm24194 miRNA miRNA MGP_WSBEiJ_T0096797.1 MGP_WSBEiJ_G0035478.1 mouse_genomes_project 17 80969594 80969952 - pseudogene pseudogene MGP_WSBEiJ_T0047698.1 MGP_WSBEiJ_G0023353.1 mouse_genomes_project 17 87843484 87930567 - MGP_WSBEiJ_P0047698 Lrpprc protein_coding protein_coding MGP_WSBEiJ_T0047699.1 MGP_WSBEiJ_G0023353.1 mouse_genomes_project 17 87851012 87869389 - Lrpprc protein_coding processed_transcript MGP_WSBEiJ_T0047700.1 MGP_WSBEiJ_G0023353.1 mouse_genomes_project 17 87869384 87890092 - MGP_WSBEiJ_P0047700 Lrpprc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047701.1 MGP_WSBEiJ_G0023353.1 mouse_genomes_project 17 87887610 87890092 - Lrpprc protein_coding retained_intron MGP_WSBEiJ_T0047702.1 MGP_WSBEiJ_G0023353.1 mouse_genomes_project 17 87905762 87930798 - Lrpprc protein_coding retained_intron MGP_WSBEiJ_T0047703.1 MGP_WSBEiJ_G0023353.1 mouse_genomes_project 17 87906923 87930571 - Lrpprc protein_coding retained_intron MGP_WSBEiJ_T0047704.1 MGP_WSBEiJ_G0023353.1 mouse_genomes_project 17 87909669 87917551 - Lrpprc protein_coding processed_transcript MGP_WSBEiJ_T0047136.1 MGP_WSBEiJ_G0023145.1 mouse_genomes_project 17 49843943 49847479 - Tspo2 protein_coding retained_intron MGP_WSBEiJ_T0047137.1 MGP_WSBEiJ_G0023145.1 mouse_genomes_project 17 49844421 49847509 - MGP_WSBEiJ_P0047137 Tspo2 protein_coding protein_coding MGP_WSBEiJ_T0047138.1 MGP_WSBEiJ_G0023145.1 mouse_genomes_project 17 49844505 49846060 - MGP_WSBEiJ_P0047138 Tspo2 protein_coding protein_coding MGP_WSBEiJ_T0047139.1 MGP_WSBEiJ_G0023145.1 mouse_genomes_project 17 49844554 49846057 - MGP_WSBEiJ_P0047139 Tspo2 protein_coding protein_coding MGP_WSBEiJ_T0047140.1 MGP_WSBEiJ_G0023145.1 mouse_genomes_project 17 49845922 49847504 - Tspo2 protein_coding processed_transcript MGP_WSBEiJ_T0098001.1 MGP_WSBEiJ_G0036664.1 mouse_genomes_project 17 47380356 47380463 - Gm22474 snRNA snRNA MGP_WSBEiJ_T0045878.1 MGP_WSBEiJ_G0022801.1 mouse_genomes_project 17 32366461 32379105 - MGP_WSBEiJ_P0045878 Zfp870 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045997.1 MGP_WSBEiJ_G0022831.1 mouse_genomes_project 17 33460201 33461335 + MGP_WSBEiJ_P0045997 Zbtb22 protein_coding protein_coding MGP_WSBEiJ_T0045998.1 MGP_WSBEiJ_G0022831.1 mouse_genomes_project 17 33460468 33463517 + MGP_WSBEiJ_P0045998 Zbtb22 protein_coding protein_coding MGP_WSBEiJ_T0047113.1 MGP_WSBEiJ_G0023139.1 mouse_genomes_project 17 49704562 49712533 + MGP_WSBEiJ_P0047113 B430306N03Rik protein_coding protein_coding MGP_WSBEiJ_T0047114.1 MGP_WSBEiJ_G0023139.1 mouse_genomes_project 17 49704667 49711032 + MGP_WSBEiJ_P0047114 B430306N03Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006852.1 MGP_WSBEiJ_G0005646.1 mouse_genomes_project 17 46854034 46905814 + lincRNA lincRNA MGP_WSBEiJ_T0006853.1 MGP_WSBEiJ_G0005646.1 mouse_genomes_project 17 46877005 46915952 + lincRNA lincRNA MGP_WSBEiJ_T0003701.1 MGP_WSBEiJ_G0003330.1 mouse_genomes_project 17 51284661 51288869 - Gm16555 antisense antisense MGP_WSBEiJ_T0044987.1 MGP_WSBEiJ_G0022589.1 mouse_genomes_project 17 23214239 23218582 - Dnase1l2 protein_coding retained_intron MGP_WSBEiJ_T0044988.1 MGP_WSBEiJ_G0022589.1 mouse_genomes_project 17 23214245 23219486 - MGP_WSBEiJ_P0044988 Dnase1l2 protein_coding protein_coding MGP_WSBEiJ_T0044989.1 MGP_WSBEiJ_G0022589.1 mouse_genomes_project 17 23216971 23219465 - MGP_WSBEiJ_P0044989 Dnase1l2 protein_coding protein_coding MGP_WSBEiJ_T0044990.1 MGP_WSBEiJ_G0022589.1 mouse_genomes_project 17 23217162 23218534 - MGP_WSBEiJ_P0044990 Dnase1l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044991.1 MGP_WSBEiJ_G0022589.1 mouse_genomes_project 17 23217908 23219082 - MGP_WSBEiJ_P0044991 Dnase1l2 protein_coding protein_coding MGP_WSBEiJ_T0044992.1 MGP_WSBEiJ_G0022589.1 mouse_genomes_project 17 23218106 23219485 - MGP_WSBEiJ_P0044992 Dnase1l2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044854.1 MGP_WSBEiJ_G0022551.1 mouse_genomes_project 17 22251239 22264912 - MGP_WSBEiJ_P0044854 Zfp13 protein_coding protein_coding MGP_WSBEiJ_T0044855.1 MGP_WSBEiJ_G0022551.1 mouse_genomes_project 17 22251246 22280230 - MGP_WSBEiJ_P0044855 Zfp13 protein_coding protein_coding MGP_WSBEiJ_T0045672.1 MGP_WSBEiJ_G0022747.1 mouse_genomes_project 17 28428664 28444217 - MGP_WSBEiJ_P0045672 Ppil1 protein_coding protein_coding MGP_WSBEiJ_T0045673.1 MGP_WSBEiJ_G0022747.1 mouse_genomes_project 17 28429086 28436967 - Ppil1 protein_coding retained_intron MGP_WSBEiJ_T0045674.1 MGP_WSBEiJ_G0022747.1 mouse_genomes_project 17 28429125 28443972 - MGP_WSBEiJ_P0045674 Ppil1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045675.1 MGP_WSBEiJ_G0022747.1 mouse_genomes_project 17 28441176 28443998 - Ppil1 protein_coding processed_transcript MGP_WSBEiJ_T0012922.1 MGP_WSBEiJ_G0011052.1 mouse_genomes_project 17 33529296 33529558 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047247.1 MGP_WSBEiJ_G0023188.1 mouse_genomes_project 17 57928326 57936419 - MGP_WSBEiJ_P0047247 Mydgf protein_coding protein_coding MGP_WSBEiJ_T0047248.1 MGP_WSBEiJ_G0023188.1 mouse_genomes_project 17 57930678 57936348 - Mydgf protein_coding retained_intron MGP_WSBEiJ_T0047249.1 MGP_WSBEiJ_G0023188.1 mouse_genomes_project 17 57931884 57936163 - Mydgf protein_coding processed_transcript MGP_WSBEiJ_T0045410.1 MGP_WSBEiJ_G0022687.1 mouse_genomes_project 17 25176320 25177104 - MGP_WSBEiJ_P0045410 protein_coding protein_coding MGP_WSBEiJ_T0045412.1 MGP_WSBEiJ_G0022687.1 mouse_genomes_project 17 25176361 25176968 - protein_coding retained_intron MGP_WSBEiJ_T0003631.1 MGP_WSBEiJ_G0003283.1 mouse_genomes_project 17 8304959 8325293 + A230009B12Rik antisense antisense MGP_WSBEiJ_T0003632.1 MGP_WSBEiJ_G0003283.1 mouse_genomes_project 17 8304965 8324929 + A230009B12Rik antisense antisense MGP_WSBEiJ_T0003633.1 MGP_WSBEiJ_G0003283.1 mouse_genomes_project 17 8305039 8344414 + A230009B12Rik antisense antisense MGP_WSBEiJ_T0003634.1 MGP_WSBEiJ_G0003283.1 mouse_genomes_project 17 8314483 8324928 + A230009B12Rik antisense antisense MGP_WSBEiJ_T0000950.1 MGP_WSBEiJ_G0000886.1 mouse_genomes_project 17 9164905 9167749 - TEC TEC MGP_WSBEiJ_T0006803.1 MGP_WSBEiJ_G0005605.1 mouse_genomes_project 17 15562805 15568308 - Gm26873 lincRNA lincRNA MGP_WSBEiJ_T0006797.1 MGP_WSBEiJ_G0005599.1 mouse_genomes_project 17 10222159 10230519 + 4732491K20Rik lincRNA lincRNA MGP_WSBEiJ_T0047645.1 MGP_WSBEiJ_G0023327.1 mouse_genomes_project 17 83114908 83122125 - MGP_WSBEiJ_P0047645 Srsf7 protein_coding protein_coding MGP_WSBEiJ_T0046904.1 MGP_WSBEiJ_G0023079.1 mouse_genomes_project 17 47392046 47396181 - MGP_WSBEiJ_P0046904 Polr1c protein_coding protein_coding MGP_WSBEiJ_T0046905.1 MGP_WSBEiJ_G0023079.1 mouse_genomes_project 17 47392227 47394700 - MGP_WSBEiJ_P0046905 Polr1c protein_coding protein_coding MGP_WSBEiJ_T0046906.1 MGP_WSBEiJ_G0023079.1 mouse_genomes_project 17 47392650 47396059 - Polr1c protein_coding retained_intron MGP_WSBEiJ_T0046907.1 MGP_WSBEiJ_G0023079.1 mouse_genomes_project 17 47392739 47396095 - MGP_WSBEiJ_P0046907 Polr1c protein_coding protein_coding MGP_WSBEiJ_T0046908.1 MGP_WSBEiJ_G0023079.1 mouse_genomes_project 17 47392961 47396095 - MGP_WSBEiJ_P0046908 Polr1c protein_coding protein_coding MGP_WSBEiJ_T0046909.1 MGP_WSBEiJ_G0023079.1 mouse_genomes_project 17 47393059 47396095 - MGP_WSBEiJ_P0046909 Polr1c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046910.1 MGP_WSBEiJ_G0023079.1 mouse_genomes_project 17 47393388 47396094 - Polr1c protein_coding retained_intron MGP_WSBEiJ_T0046911.1 MGP_WSBEiJ_G0023079.1 mouse_genomes_project 17 47395425 47396095 - Polr1c protein_coding retained_intron MGP_WSBEiJ_T0098016.1 MGP_WSBEiJ_G0036679.1 mouse_genomes_project 17 87510655 87510762 + Gm24722 snRNA snRNA MGP_WSBEiJ_T0047691.1 MGP_WSBEiJ_G0023350.1 mouse_genomes_project 17 87761987 87791660 + MGP_WSBEiJ_P0047691 Dync2li1 protein_coding protein_coding MGP_WSBEiJ_T0045103.1 MGP_WSBEiJ_G0022622.1 mouse_genomes_project 17 23704191 23705224 + MGP_WSBEiJ_P0045103 Nme3 protein_coding protein_coding MGP_WSBEiJ_T0045104.1 MGP_WSBEiJ_G0022622.1 mouse_genomes_project 17 23704196 23705037 + Nme3 protein_coding processed_transcript MGP_WSBEiJ_T0045105.1 MGP_WSBEiJ_G0022622.1 mouse_genomes_project 17 23704212 23704946 + Nme3 protein_coding retained_intron MGP_WSBEiJ_T0045106.1 MGP_WSBEiJ_G0022622.1 mouse_genomes_project 17 23704214 23705186 + Nme3 protein_coding retained_intron MGP_WSBEiJ_T0045107.1 MGP_WSBEiJ_G0022622.1 mouse_genomes_project 17 23704452 23705049 + Nme3 protein_coding retained_intron MGP_WSBEiJ_T0003652.1 MGP_WSBEiJ_G0003294.1 mouse_genomes_project 17 25547395 25552115 - Gm17218 antisense antisense MGP_WSBEiJ_T0096993.1 MGP_WSBEiJ_G0035674.1 mouse_genomes_project 17 49170213 49170332 + n-R5s28 rRNA rRNA MGP_WSBEiJ_T0046607.1 MGP_WSBEiJ_G0022958.1 mouse_genomes_project 17 36761108 36763279 + MGP_WSBEiJ_P0046607 H2-M11 protein_coding protein_coding MGP_WSBEiJ_T0047041.1 MGP_WSBEiJ_G0023122.1 mouse_genomes_project 17 48909552 48952224 + Gm20517 protein_coding retained_intron MGP_WSBEiJ_T0047042.1 MGP_WSBEiJ_G0023122.1 mouse_genomes_project 17 48909561 48953548 + Gm20517 protein_coding retained_intron MGP_WSBEiJ_T0047044.1 MGP_WSBEiJ_G0023122.1 mouse_genomes_project 17 48909576 48986191 + MGP_WSBEiJ_P0047044 Gm20517 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046711.1 MGP_WSBEiJ_G0023007.1 mouse_genomes_project 17 38470777 38473664 - MGP_WSBEiJ_P0046711 protein_coding protein_coding MGP_WSBEiJ_T0003648.1 MGP_WSBEiJ_G0003291.1 mouse_genomes_project 17 23307031 23307531 + Rab26os antisense antisense MGP_WSBEiJ_T0003649.1 MGP_WSBEiJ_G0003291.1 mouse_genomes_project 17 23307050 23307530 + Rab26os antisense antisense MGP_WSBEiJ_T0046706.1 MGP_WSBEiJ_G0023003.1 mouse_genomes_project 17 38224042 38224983 + MGP_WSBEiJ_P0046706 Olfr123 protein_coding protein_coding MGP_WSBEiJ_T0044784.1 MGP_WSBEiJ_G0022510.1 mouse_genomes_project 17 18871237 18872134 + MGP_WSBEiJ_P0044784 Vmn1r224 protein_coding protein_coding MGP_WSBEiJ_T0011234.1 MGP_WSBEiJ_G0009391.1 mouse_genomes_project 17 78851361 78851469 - Gm26124 misc_RNA misc_RNA MGP_WSBEiJ_T0000963.1 MGP_WSBEiJ_G0000898.1 mouse_genomes_project 17 53406196 53409836 + TEC TEC MGP_WSBEiJ_T0047220.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57749856 57757463 + MGP_WSBEiJ_P0047220 Mpnd protein_coding protein_coding MGP_WSBEiJ_T0047221.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57754741 57762094 + MGP_WSBEiJ_P0047221 Mpnd protein_coding protein_coding MGP_WSBEiJ_T0047222.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57754748 57761950 + MGP_WSBEiJ_P0047222 Mpnd protein_coding protein_coding MGP_WSBEiJ_T0047223.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57754771 57761957 + MGP_WSBEiJ_P0047223 Mpnd protein_coding protein_coding MGP_WSBEiJ_T0047224.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57754795 57757861 + Mpnd protein_coding retained_intron MGP_WSBEiJ_T0047225.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57754873 57761918 + MGP_WSBEiJ_P0047225 Mpnd protein_coding protein_coding MGP_WSBEiJ_T0047226.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57755473 57757206 + Mpnd protein_coding retained_intron MGP_WSBEiJ_T0047227.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57755980 57760801 + MGP_WSBEiJ_P0047227 Mpnd protein_coding protein_coding MGP_WSBEiJ_T0047228.1 MGP_WSBEiJ_G0023178.1 mouse_genomes_project 17 57757481 57760428 + Mpnd protein_coding retained_intron MGP_WSBEiJ_T0046415.1 MGP_WSBEiJ_G0022920.1 mouse_genomes_project 17 35051304 35060195 + MGP_WSBEiJ_P0046415 Ddx39b protein_coding protein_coding MGP_WSBEiJ_T0046416.1 MGP_WSBEiJ_G0022920.1 mouse_genomes_project 17 35051306 35064368 + MGP_WSBEiJ_P0046416 Ddx39b protein_coding protein_coding MGP_WSBEiJ_T0046417.1 MGP_WSBEiJ_G0022920.1 mouse_genomes_project 17 35051365 35060756 + Ddx39b protein_coding retained_intron MGP_WSBEiJ_T0046418.1 MGP_WSBEiJ_G0022920.1 mouse_genomes_project 17 35051430 35064341 + MGP_WSBEiJ_P0046418 Ddx39b protein_coding protein_coding MGP_WSBEiJ_T0046419.1 MGP_WSBEiJ_G0022920.1 mouse_genomes_project 17 35051556 35052786 + Ddx39b protein_coding processed_transcript MGP_WSBEiJ_T0046420.1 MGP_WSBEiJ_G0022920.1 mouse_genomes_project 17 35052229 35064337 + MGP_WSBEiJ_P0046420 Ddx39b protein_coding protein_coding MGP_WSBEiJ_T0046196.1 MGP_WSBEiJ_G0022871.1 mouse_genomes_project 17 34349567 34352929 + MGP_WSBEiJ_P0046196 Prrt1 protein_coding protein_coding MGP_WSBEiJ_T0046197.1 MGP_WSBEiJ_G0022871.1 mouse_genomes_project 17 34351436 34352200 + Prrt1 protein_coding retained_intron MGP_WSBEiJ_T0045715.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28890043 28938595 + MGP_WSBEiJ_P0045715 Cmtr1 protein_coding protein_coding MGP_WSBEiJ_T0045716.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28890255 28904030 + MGP_WSBEiJ_P0045716 Cmtr1 protein_coding protein_coding MGP_WSBEiJ_T0045717.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28908624 28921077 + Cmtr1 protein_coding retained_intron MGP_WSBEiJ_T0045718.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28909006 28911901 + MGP_WSBEiJ_P0045718 Cmtr1 protein_coding protein_coding MGP_WSBEiJ_T0045719.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28910177 28920663 + Cmtr1 protein_coding processed_transcript MGP_WSBEiJ_T0045720.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28910907 28915664 + Cmtr1 protein_coding processed_transcript MGP_WSBEiJ_T0045721.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28911884 28920767 + Cmtr1 protein_coding retained_intron MGP_WSBEiJ_T0045722.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28915530 28920749 + Cmtr1 protein_coding retained_intron MGP_WSBEiJ_T0045723.1 MGP_WSBEiJ_G0022758.1 mouse_genomes_project 17 28916791 28935974 + Cmtr1 protein_coding retained_intron MGP_WSBEiJ_T0047438.1 MGP_WSBEiJ_G0023261.1 mouse_genomes_project 17 68939894 69656474 - MGP_WSBEiJ_P0047438 Ptprm protein_coding protein_coding MGP_WSBEiJ_T0047439.1 MGP_WSBEiJ_G0023261.1 mouse_genomes_project 17 69048754 69656044 - MGP_WSBEiJ_P0047439 Ptprm protein_coding unknown_likely_coding MGP_WSBEiJ_T0010033.1 MGP_WSBEiJ_G0008190.1 mouse_genomes_project 17 28820661 28820724 + Mir7667 miRNA miRNA MGP_WSBEiJ_T0044927.1 MGP_WSBEiJ_G0022574.1 mouse_genomes_project 17 22727302 22731904 - MGP_WSBEiJ_P0044927 Prss22 protein_coding protein_coding MGP_WSBEiJ_T0047437.1 MGP_WSBEiJ_G0023260.1 mouse_genomes_project 17 68820444 68862764 - MGP_WSBEiJ_P0047437 Themis3 protein_coding protein_coding MGP_WSBEiJ_T0006849.1 MGP_WSBEiJ_G0005643.1 mouse_genomes_project 17 37472503 37501925 - lincRNA lincRNA MGP_WSBEiJ_T0003647.1 MGP_WSBEiJ_G0003290.1 mouse_genomes_project 17 22551670 22557161 - Gm15947 antisense antisense MGP_WSBEiJ_T0000960.1 MGP_WSBEiJ_G0000895.1 mouse_genomes_project 17 53350200 53353383 - TEC TEC MGP_WSBEiJ_T0044986.1 MGP_WSBEiJ_G0022588.1 mouse_genomes_project 17 23196732 23213529 + MGP_WSBEiJ_P0044986 Eci1 protein_coding protein_coding MGP_WSBEiJ_T0046912.1 MGP_WSBEiJ_G0023080.1 mouse_genomes_project 17 47396206 47400664 + MGP_WSBEiJ_P0046912 Yipf3 protein_coding protein_coding MGP_WSBEiJ_T0046913.1 MGP_WSBEiJ_G0023080.1 mouse_genomes_project 17 47396251 47399615 + MGP_WSBEiJ_P0046913 Yipf3 protein_coding protein_coding MGP_WSBEiJ_T0046914.1 MGP_WSBEiJ_G0023080.1 mouse_genomes_project 17 47396271 47400128 + Yipf3 protein_coding retained_intron MGP_WSBEiJ_T0046915.1 MGP_WSBEiJ_G0023080.1 mouse_genomes_project 17 47397155 47400031 + MGP_WSBEiJ_P0046915 Yipf3 protein_coding protein_coding MGP_WSBEiJ_T0046916.1 MGP_WSBEiJ_G0023080.1 mouse_genomes_project 17 47398215 47399120 + Yipf3 protein_coding processed_transcript MGP_WSBEiJ_T0046917.1 MGP_WSBEiJ_G0023080.1 mouse_genomes_project 17 47399467 47400144 + Yipf3 protein_coding processed_transcript MGP_WSBEiJ_T0006894.1 MGP_WSBEiJ_G0005673.1 mouse_genomes_project 17 98366605 98368239 - lincRNA lincRNA MGP_WSBEiJ_T0006895.1 MGP_WSBEiJ_G0005673.1 mouse_genomes_project 17 98367911 98371206 - lincRNA lincRNA MGP_WSBEiJ_T0045238.1 MGP_WSBEiJ_G0022650.1 mouse_genomes_project 17 24564879 24573327 - MGP_WSBEiJ_P0045238 Chtf18 protein_coding protein_coding MGP_WSBEiJ_T0045239.1 MGP_WSBEiJ_G0022650.1 mouse_genomes_project 17 24564879 24573279 - MGP_WSBEiJ_P0045239 Chtf18 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045240.1 MGP_WSBEiJ_G0022650.1 mouse_genomes_project 17 24564983 24573274 - Chtf18 protein_coding retained_intron MGP_WSBEiJ_T0045241.1 MGP_WSBEiJ_G0022650.1 mouse_genomes_project 17 24564999 24566855 - MGP_WSBEiJ_P0045241 Chtf18 protein_coding protein_coding MGP_WSBEiJ_T0045242.1 MGP_WSBEiJ_G0022650.1 mouse_genomes_project 17 24565000 24565739 - MGP_WSBEiJ_P0045242 Chtf18 protein_coding protein_coding MGP_WSBEiJ_T0045243.1 MGP_WSBEiJ_G0022650.1 mouse_genomes_project 17 24566222 24566852 - Chtf18 protein_coding retained_intron MGP_WSBEiJ_T0045244.1 MGP_WSBEiJ_G0022650.1 mouse_genomes_project 17 24571483 24573318 - MGP_WSBEiJ_P0045244 Chtf18 protein_coding protein_coding MGP_WSBEiJ_T0100667.1 MGP_WSBEiJ_G0039125.1 mouse_genomes_project 17 37749111 37750038 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0044565.1 MGP_WSBEiJ_G0022433.1 mouse_genomes_project 17 6036348 6056009 + MGP_WSBEiJ_P0044565 Mpc1 protein_coding protein_coding MGP_WSBEiJ_T0044566.1 MGP_WSBEiJ_G0022433.1 mouse_genomes_project 17 6039800 6050830 + Mpc1 protein_coding retained_intron MGP_WSBEiJ_T0044567.1 MGP_WSBEiJ_G0022433.1 mouse_genomes_project 17 6039856 6056381 + MGP_WSBEiJ_P0044567 Mpc1 protein_coding protein_coding MGP_WSBEiJ_T0044568.1 MGP_WSBEiJ_G0022433.1 mouse_genomes_project 17 6053311 6056274 + Mpc1 protein_coding retained_intron MGP_WSBEiJ_T0006886.1 MGP_WSBEiJ_G0005668.1 mouse_genomes_project 17 88991157 89021220 - Gm29418 lincRNA lincRNA MGP_WSBEiJ_T0099247.1 MGP_WSBEiJ_G0037910.1 mouse_genomes_project 17 61065048 61065169 - Gm23769 snoRNA snoRNA MGP_WSBEiJ_T0045377.1 MGP_WSBEiJ_G0022683.1 mouse_genomes_project 17 25070322 25075240 - MGP_WSBEiJ_P0045377 Arhgdig protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045379.1 MGP_WSBEiJ_G0022683.1 mouse_genomes_project 17 25073279 25075447 - MGP_WSBEiJ_P0045379 Arhgdig protein_coding protein_coding MGP_WSBEiJ_T0045380.1 MGP_WSBEiJ_G0022683.1 mouse_genomes_project 17 25073493 25075466 - MGP_WSBEiJ_P0045380 Arhgdig protein_coding protein_coding MGP_WSBEiJ_T0045381.1 MGP_WSBEiJ_G0022683.1 mouse_genomes_project 17 25073532 25081883 - Arhgdig protein_coding processed_transcript MGP_WSBEiJ_T0045382.1 MGP_WSBEiJ_G0022683.1 mouse_genomes_project 17 25073587 25075241 - Arhgdig protein_coding retained_intron MGP_WSBEiJ_T0046211.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34603545 34606419 + MGP_WSBEiJ_P0046211 Dxo protein_coding protein_coding MGP_WSBEiJ_T0046212.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34603545 34606957 + MGP_WSBEiJ_P0046212 Dxo protein_coding protein_coding MGP_WSBEiJ_T0046213.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34603545 34607004 + MGP_WSBEiJ_P0046213 Dxo protein_coding protein_coding MGP_WSBEiJ_T0046214.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34603608 34604886 + Dxo protein_coding retained_intron MGP_WSBEiJ_T0046215.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34603774 34604504 + MGP_WSBEiJ_P0046215 Dxo protein_coding protein_coding MGP_WSBEiJ_T0046216.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34603925 34606908 + MGP_WSBEiJ_P0046216 Dxo protein_coding protein_coding MGP_WSBEiJ_T0046217.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34604183 34606909 + MGP_WSBEiJ_P0046217 Dxo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046218.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34604519 34606454 + MGP_WSBEiJ_P0046218 Dxo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046219.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34604821 34606908 + MGP_WSBEiJ_P0046219 Dxo protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046220.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34604850 34606908 + MGP_WSBEiJ_P0046220 Dxo protein_coding protein_coding MGP_WSBEiJ_T0046221.1 MGP_WSBEiJ_G0022877.1 mouse_genomes_project 17 34604970 34606894 + MGP_WSBEiJ_P0046221 Dxo protein_coding protein_coding MGP_WSBEiJ_T0045903.1 MGP_WSBEiJ_G0022812.1 mouse_genomes_project 17 32794638 32795593 + MGP_WSBEiJ_P0045903 Olfr63 protein_coding protein_coding MGP_WSBEiJ_T0046926.1 MGP_WSBEiJ_G0023084.1 mouse_genomes_project 17 47452814 47476223 - MGP_WSBEiJ_P0046926 Abcc10 protein_coding protein_coding MGP_WSBEiJ_T0046927.1 MGP_WSBEiJ_G0023084.1 mouse_genomes_project 17 47452823 47476176 - MGP_WSBEiJ_P0046927 Abcc10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046928.1 MGP_WSBEiJ_G0023084.1 mouse_genomes_project 17 47452826 47476179 - MGP_WSBEiJ_P0046928 Abcc10 protein_coding protein_coding MGP_WSBEiJ_T0046929.1 MGP_WSBEiJ_G0023084.1 mouse_genomes_project 17 47453014 47473978 - MGP_WSBEiJ_P0046929 Abcc10 protein_coding protein_coding MGP_WSBEiJ_T0046930.1 MGP_WSBEiJ_G0023084.1 mouse_genomes_project 17 47463613 47471844 - MGP_WSBEiJ_P0046930 Abcc10 protein_coding protein_coding MGP_WSBEiJ_T0046931.1 MGP_WSBEiJ_G0023084.1 mouse_genomes_project 17 47471069 47476197 - Abcc10 protein_coding retained_intron MGP_WSBEiJ_T0046932.1 MGP_WSBEiJ_G0023084.1 mouse_genomes_project 17 47472768 47476552 - Abcc10 protein_coding processed_transcript MGP_WSBEiJ_T0046239.1 MGP_WSBEiJ_G0022880.1 mouse_genomes_project 17 34624073 34626724 - MGP_WSBEiJ_P0046239 Cfb protein_coding protein_coding MGP_WSBEiJ_T0046240.1 MGP_WSBEiJ_G0022880.1 mouse_genomes_project 17 34624073 34630215 - MGP_WSBEiJ_P0046240 Cfb protein_coding protein_coding MGP_WSBEiJ_T0046241.1 MGP_WSBEiJ_G0022880.1 mouse_genomes_project 17 34624078 34629870 - MGP_WSBEiJ_P0046241 Cfb protein_coding protein_coding MGP_WSBEiJ_T0046242.1 MGP_WSBEiJ_G0022880.1 mouse_genomes_project 17 34624083 34630211 - MGP_WSBEiJ_P0046242 Cfb protein_coding protein_coding MGP_WSBEiJ_T0046243.1 MGP_WSBEiJ_G0022880.1 mouse_genomes_project 17 34624083 34630211 - MGP_WSBEiJ_P0046243 Cfb protein_coding protein_coding MGP_WSBEiJ_T0046244.1 MGP_WSBEiJ_G0022880.1 mouse_genomes_project 17 34624090 34625840 - MGP_WSBEiJ_P0046244 Cfb protein_coding protein_coding MGP_WSBEiJ_T0046245.1 MGP_WSBEiJ_G0022880.1 mouse_genomes_project 17 34624111 34627009 - MGP_WSBEiJ_P0046245 Cfb protein_coding protein_coding MGP_WSBEiJ_T0046248.1 MGP_WSBEiJ_G0022880.1 mouse_genomes_project 17 34624273 34626740 - MGP_WSBEiJ_P0046248 Cfb protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045895.1 MGP_WSBEiJ_G0022807.1 mouse_genomes_project 17 32547149 32551064 - MGP_WSBEiJ_P0045895 4921501E09Rik protein_coding protein_coding MGP_WSBEiJ_T0003692.1 MGP_WSBEiJ_G0003323.1 mouse_genomes_project 17 45620401 45621583 + Runx2os3 antisense antisense MGP_WSBEiJ_T0016999.1 MGP_WSBEiJ_G0014775.1 mouse_genomes_project 17 74100703 74147124 - Trmt61b processed_transcript processed_transcript MGP_WSBEiJ_T0017000.1 MGP_WSBEiJ_G0014775.1 mouse_genomes_project 17 74100738 74147115 - Trmt61b processed_transcript processed_transcript MGP_WSBEiJ_T0017001.1 MGP_WSBEiJ_G0014775.1 mouse_genomes_project 17 74134561 74146622 - Trmt61b processed_transcript processed_transcript MGP_WSBEiJ_T0003637.1 MGP_WSBEiJ_G0003285.1 mouse_genomes_project 17 8960013 8967223 - Gm28505 antisense antisense MGP_WSBEiJ_T0000965.1 MGP_WSBEiJ_G0000900.1 mouse_genomes_project 17 55963365 55963691 + TEC TEC MGP_WSBEiJ_T0045759.1 MGP_WSBEiJ_G0022773.1 mouse_genomes_project 17 30568946 30598546 - MGP_WSBEiJ_P0045759 Rsph1 protein_coding protein_coding MGP_WSBEiJ_T0047171.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53290029 53387664 - MGP_WSBEiJ_P0047171 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047172.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53290030 53381591 - MGP_WSBEiJ_P0047172 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047173.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53292736 53389237 - MGP_WSBEiJ_P0047173 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047174.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53293295 53365122 - MGP_WSBEiJ_P0047174 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047175.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53293305 53381569 - MGP_WSBEiJ_P0047175 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047176.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53293315 53369211 - MGP_WSBEiJ_P0047176 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047177.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53293320 53366885 - MGP_WSBEiJ_P0047177 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047178.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53293832 53296111 - Satb1 protein_coding retained_intron MGP_WSBEiJ_T0047179.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53356529 53363336 - Satb1 protein_coding processed_transcript MGP_WSBEiJ_T0047180.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53358565 53376104 - MGP_WSBEiJ_P0047180 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047181.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53359562 53387011 - MGP_WSBEiJ_P0047181 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047182.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53361281 53365122 - Satb1 protein_coding retained_intron MGP_WSBEiJ_T0047183.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53363392 53381591 - MGP_WSBEiJ_P0047183 Satb1 protein_coding protein_coding MGP_WSBEiJ_T0047184.1 MGP_WSBEiJ_G0023155.1 mouse_genomes_project 17 53379645 53384502 - Satb1 protein_coding retained_intron MGP_WSBEiJ_T0046993.1 MGP_WSBEiJ_G0023106.1 mouse_genomes_project 17 47974377 47984994 - MGP_WSBEiJ_P0046993 Rpl7l1 protein_coding protein_coding MGP_WSBEiJ_T0046085.1 MGP_WSBEiJ_G0022847.1 mouse_genomes_project 17 33726277 33739695 + MGP_WSBEiJ_P0046085 protein_coding protein_coding MGP_WSBEiJ_T0045879.1 MGP_WSBEiJ_G0022802.1 mouse_genomes_project 17 32395094 32408194 - MGP_WSBEiJ_P0045879 Cyp4f14 protein_coding protein_coding MGP_WSBEiJ_T0045880.1 MGP_WSBEiJ_G0022802.1 mouse_genomes_project 17 32395094 32407939 - MGP_WSBEiJ_P0045880 Cyp4f14 protein_coding protein_coding MGP_WSBEiJ_T0098019.1 MGP_WSBEiJ_G0036682.1 mouse_genomes_project 17 91741709 91741804 - Gm22542 snRNA snRNA MGP_WSBEiJ_T0097983.1 MGP_WSBEiJ_G0036646.1 mouse_genomes_project 17 4741834 4741999 - Gm25730 snRNA snRNA MGP_WSBEiJ_T0047631.1 MGP_WSBEiJ_G0023321.1 mouse_genomes_project 17 82480510 82542800 + MGP_WSBEiJ_P0047631 Rmdn2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045072.1 MGP_WSBEiJ_G0022611.1 mouse_genomes_project 17 23537498 23547419 + MGP_WSBEiJ_P0045072 Msrb1 protein_coding protein_coding MGP_WSBEiJ_T0045073.1 MGP_WSBEiJ_G0022611.1 mouse_genomes_project 17 23537538 23547412 + MGP_WSBEiJ_P0045073 Msrb1 protein_coding protein_coding MGP_WSBEiJ_T0046180.1 MGP_WSBEiJ_G0022869.1 mouse_genomes_project 17 34330235 34332206 - Egfl8 protein_coding retained_intron MGP_WSBEiJ_T0046181.1 MGP_WSBEiJ_G0022869.1 mouse_genomes_project 17 34330236 34332857 - MGP_WSBEiJ_P0046181 Egfl8 protein_coding protein_coding MGP_WSBEiJ_T0046182.1 MGP_WSBEiJ_G0022869.1 mouse_genomes_project 17 34330240 34332857 - MGP_WSBEiJ_P0046182 Egfl8 protein_coding protein_coding MGP_WSBEiJ_T0046183.1 MGP_WSBEiJ_G0022869.1 mouse_genomes_project 17 34330663 34332674 - MGP_WSBEiJ_P0046183 Egfl8 protein_coding protein_coding MGP_WSBEiJ_T0046184.1 MGP_WSBEiJ_G0022869.1 mouse_genomes_project 17 34331050 34332842 - Egfl8 protein_coding retained_intron MGP_WSBEiJ_T0046185.1 MGP_WSBEiJ_G0022869.1 mouse_genomes_project 17 34331655 34332207 - Egfl8 protein_coding retained_intron MGP_WSBEiJ_T0047002.1 MGP_WSBEiJ_G0023112.1 mouse_genomes_project 17 48251729 48251990 - MGP_WSBEiJ_P0047002 Gm16494 protein_coding protein_coding MGP_WSBEiJ_T0097998.1 MGP_WSBEiJ_G0036661.1 mouse_genomes_project 17 41834710 41834858 - Gm23078 snRNA snRNA MGP_WSBEiJ_T0045706.1 MGP_WSBEiJ_G0022756.1 mouse_genomes_project 17 28841117 28870374 + MGP_WSBEiJ_P0045706 Rnf8 protein_coding protein_coding MGP_WSBEiJ_T0045707.1 MGP_WSBEiJ_G0022756.1 mouse_genomes_project 17 28841149 28854020 + MGP_WSBEiJ_P0045707 Rnf8 protein_coding protein_coding MGP_WSBEiJ_T0045708.1 MGP_WSBEiJ_G0022756.1 mouse_genomes_project 17 28841181 28870297 + MGP_WSBEiJ_P0045708 Rnf8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045710.1 MGP_WSBEiJ_G0022756.1 mouse_genomes_project 17 28841217 28845885 + Rnf8 protein_coding processed_transcript MGP_WSBEiJ_T0045711.1 MGP_WSBEiJ_G0022756.1 mouse_genomes_project 17 28842463 28854053 + MGP_WSBEiJ_P0045711 Rnf8 protein_coding protein_coding MGP_WSBEiJ_T0045712.1 MGP_WSBEiJ_G0022756.1 mouse_genomes_project 17 28855615 28864648 + Rnf8 protein_coding retained_intron MGP_WSBEiJ_T0045713.1 MGP_WSBEiJ_G0022756.1 mouse_genomes_project 17 28858501 28870245 + Rnf8 protein_coding retained_intron MGP_WSBEiJ_T0045714.1 MGP_WSBEiJ_G0022756.1 mouse_genomes_project 17 28861395 28870266 + Rnf8 protein_coding retained_intron MGP_WSBEiJ_T0044800.1 MGP_WSBEiJ_G0022520.1 mouse_genomes_project 17 19453268 19454228 - MGP_WSBEiJ_P0044800 Vmn1r233 protein_coding protein_coding MGP_WSBEiJ_T0044941.1 MGP_WSBEiJ_G0022579.1 mouse_genomes_project 17 22897117 22911084 - Amdhd2 protein_coding retained_intron MGP_WSBEiJ_T0044942.1 MGP_WSBEiJ_G0022579.1 mouse_genomes_project 17 22897117 22898024 - Amdhd2 protein_coding processed_transcript MGP_WSBEiJ_T0044943.1 MGP_WSBEiJ_G0022579.1 mouse_genomes_project 17 22897117 22911120 - MGP_WSBEiJ_P0044943 Amdhd2 protein_coding protein_coding MGP_WSBEiJ_T0044944.1 MGP_WSBEiJ_G0022579.1 mouse_genomes_project 17 22897119 22898877 - MGP_WSBEiJ_P0044944 Amdhd2 protein_coding protein_coding MGP_WSBEiJ_T0044945.1 MGP_WSBEiJ_G0022579.1 mouse_genomes_project 17 22899626 22904721 - MGP_WSBEiJ_P0044945 Amdhd2 protein_coding protein_coding MGP_WSBEiJ_T0044946.1 MGP_WSBEiJ_G0022579.1 mouse_genomes_project 17 22903622 22911047 - Amdhd2 protein_coding retained_intron MGP_WSBEiJ_T0045667.1 MGP_WSBEiJ_G0022746.1 mouse_genomes_project 17 28329829 28413364 - MGP_WSBEiJ_P0045667 Cpne5 protein_coding protein_coding MGP_WSBEiJ_T0045668.1 MGP_WSBEiJ_G0022746.1 mouse_genomes_project 17 28331195 28359056 - Cpne5 protein_coding processed_transcript MGP_WSBEiJ_T0045669.1 MGP_WSBEiJ_G0022746.1 mouse_genomes_project 17 28342578 28350219 - Cpne5 protein_coding processed_transcript MGP_WSBEiJ_T0045670.1 MGP_WSBEiJ_G0022746.1 mouse_genomes_project 17 28363291 28413326 - MGP_WSBEiJ_P0045670 Cpne5 protein_coding protein_coding MGP_WSBEiJ_T0045671.1 MGP_WSBEiJ_G0022746.1 mouse_genomes_project 17 28391526 28413279 - Cpne5 protein_coding retained_intron MGP_WSBEiJ_T0044789.1 MGP_WSBEiJ_G0022515.1 mouse_genomes_project 17 19287463 19288384 + MGP_WSBEiJ_P0044789 Vmn1r229 protein_coding protein_coding MGP_WSBEiJ_T0044793.1 MGP_WSBEiJ_G0022519.1 mouse_genomes_project 17 19415098 19435756 + MGP_WSBEiJ_P0044793 Ppp2r1a protein_coding protein_coding MGP_WSBEiJ_T0044794.1 MGP_WSBEiJ_G0022519.1 mouse_genomes_project 17 19415274 19428597 + MGP_WSBEiJ_P0044794 Ppp2r1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044795.1 MGP_WSBEiJ_G0022519.1 mouse_genomes_project 17 19426389 19428650 + Ppp2r1a protein_coding retained_intron MGP_WSBEiJ_T0044796.1 MGP_WSBEiJ_G0022519.1 mouse_genomes_project 17 19426590 19429322 + MGP_WSBEiJ_P0044796 Ppp2r1a protein_coding protein_coding MGP_WSBEiJ_T0044797.1 MGP_WSBEiJ_G0022519.1 mouse_genomes_project 17 19428553 19430411 + Ppp2r1a protein_coding retained_intron MGP_WSBEiJ_T0044798.1 MGP_WSBEiJ_G0022519.1 mouse_genomes_project 17 19428801 19431749 + Ppp2r1a protein_coding retained_intron MGP_WSBEiJ_T0044799.1 MGP_WSBEiJ_G0022519.1 mouse_genomes_project 17 19430302 19431072 + Ppp2r1a protein_coding retained_intron MGP_WSBEiJ_T0044534.1 MGP_WSBEiJ_G0022418.1 mouse_genomes_project 17 4086769 4137380 - MGP_WSBEiJ_P0044534 Ezr protein_coding protein_coding MGP_WSBEiJ_T0044535.1 MGP_WSBEiJ_G0022418.1 mouse_genomes_project 17 4089570 4091567 - Ezr protein_coding processed_transcript MGP_WSBEiJ_T0012968.1 MGP_WSBEiJ_G0011098.1 mouse_genomes_project 17 75821472 75822723 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006817.1 MGP_WSBEiJ_G0005617.1 mouse_genomes_project 17 26348637 26351003 + Gm10505 lincRNA lincRNA MGP_WSBEiJ_T0047555.1 MGP_WSBEiJ_G0023296.1 mouse_genomes_project 17 76981008 77003468 - MGP_WSBEiJ_P0047555 Dpy30 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046365.1 MGP_WSBEiJ_G0022907.1 mouse_genomes_project 17 34909983 34914725 + MGP_WSBEiJ_P0046365 protein_coding protein_coding MGP_WSBEiJ_T0046366.1 MGP_WSBEiJ_G0022907.1 mouse_genomes_project 17 34910161 34910843 + protein_coding processed_transcript MGP_WSBEiJ_T0097992.1 MGP_WSBEiJ_G0036655.1 mouse_genomes_project 17 32276660 32276824 - Gm23294 snRNA snRNA MGP_WSBEiJ_T0047648.1 MGP_WSBEiJ_G0023329.1 mouse_genomes_project 17 83139998 83142375 + Gemin6 protein_coding processed_transcript MGP_WSBEiJ_T0047649.1 MGP_WSBEiJ_G0023329.1 mouse_genomes_project 17 83139998 83144995 + MGP_WSBEiJ_P0047649 Gemin6 protein_coding protein_coding MGP_WSBEiJ_T0045901.1 MGP_WSBEiJ_G0022810.1 mouse_genomes_project 17 32691280 32692318 + MGP_WSBEiJ_P0045901 Olfr239 protein_coding protein_coding MGP_WSBEiJ_T0096995.1 MGP_WSBEiJ_G0035676.1 mouse_genomes_project 17 74024901 74025009 - Gm23115 rRNA rRNA MGP_WSBEiJ_T0047759.1 MGP_WSBEiJ_G0023375.1 mouse_genomes_project 17 91002265 91054389 + MGP_WSBEiJ_P0047759 Msh2 protein_coding protein_coding MGP_WSBEiJ_T0047760.1 MGP_WSBEiJ_G0023375.1 mouse_genomes_project 17 91002475 91009588 + Msh2 protein_coding retained_intron MGP_WSBEiJ_T0047761.1 MGP_WSBEiJ_G0023375.1 mouse_genomes_project 17 91002496 91039618 + Msh2 protein_coding retained_intron MGP_WSBEiJ_T0047762.1 MGP_WSBEiJ_G0023375.1 mouse_genomes_project 17 91002544 91015284 + MGP_WSBEiJ_P0047762 Msh2 protein_coding protein_coding MGP_WSBEiJ_T0047763.1 MGP_WSBEiJ_G0023375.1 mouse_genomes_project 17 91019186 91026900 + Msh2 protein_coding retained_intron MGP_WSBEiJ_T0047764.1 MGP_WSBEiJ_G0023375.1 mouse_genomes_project 17 91026737 91048382 + MGP_WSBEiJ_P0047764 Msh2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003668.1 MGP_WSBEiJ_G0003306.1 mouse_genomes_project 17 33452519 33453547 - BC051226 antisense antisense MGP_WSBEiJ_T0003669.1 MGP_WSBEiJ_G0003306.1 mouse_genomes_project 17 33452522 33453516 - BC051226 antisense antisense MGP_WSBEiJ_T0003670.1 MGP_WSBEiJ_G0003306.1 mouse_genomes_project 17 33452631 33453655 - BC051226 antisense antisense MGP_WSBEiJ_T0046991.1 MGP_WSBEiJ_G0023104.1 mouse_genomes_project 17 47949103 47957368 - MGP_WSBEiJ_P0046991 Ptcra protein_coding protein_coding MGP_WSBEiJ_T0012972.1 MGP_WSBEiJ_G0011102.1 mouse_genomes_project 17 81679728 81681989 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003671.1 MGP_WSBEiJ_G0003307.1 mouse_genomes_project 17 33463471 33464343 - Gm19412 antisense antisense MGP_WSBEiJ_T0003672.1 MGP_WSBEiJ_G0003307.1 mouse_genomes_project 17 33463766 33464475 - Gm19412 antisense antisense MGP_WSBEiJ_T0045661.1 MGP_WSBEiJ_G0022743.1 mouse_genomes_project 17 28202940 28204592 + protein_coding retained_intron MGP_WSBEiJ_T0047562.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77229166 77418964 + MGP_WSBEiJ_P0047562 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047563.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77229339 77417991 + MGP_WSBEiJ_P0047563 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047564.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77229339 77417991 + MGP_WSBEiJ_P0047564 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047565.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77229339 77417991 + MGP_WSBEiJ_P0047565 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047566.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77229393 77273113 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047567.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77229423 77417991 + MGP_WSBEiJ_P0047567 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047568.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77250457 77253366 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047569.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77263030 77267085 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047570.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77263043 77268804 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047571.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77266712 77268951 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047572.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77267041 77272055 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047573.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77308179 77332298 + MGP_WSBEiJ_P0047573 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047574.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77314213 77317421 + MGP_WSBEiJ_P0047574 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047575.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77322916 77332297 + MGP_WSBEiJ_P0047575 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047576.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77323285 77354468 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047577.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77323315 77331106 + MGP_WSBEiJ_P0047577 Birc6 protein_coding protein_coding MGP_WSBEiJ_T0047578.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77324063 77327365 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047579.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77330737 77332297 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047580.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77366765 77373965 + MGP_WSBEiJ_P0047580 Birc6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047581.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77366775 77368599 + Birc6 protein_coding processed_transcript MGP_WSBEiJ_T0047582.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77368522 77418955 + MGP_WSBEiJ_P0047582 Birc6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047583.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77373846 77383456 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047584.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77384849 77397254 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0047585.1 MGP_WSBEiJ_G0023301.1 mouse_genomes_project 17 77412963 77418677 + Birc6 protein_coding retained_intron MGP_WSBEiJ_T0044612.1 MGP_WSBEiJ_G0022445.1 mouse_genomes_project 17 10022699 10117341 + MGP_WSBEiJ_P0044612 Agpat4 protein_coding protein_coding MGP_WSBEiJ_T0044613.1 MGP_WSBEiJ_G0022445.1 mouse_genomes_project 17 10023310 10126304 + MGP_WSBEiJ_P0044613 Agpat4 protein_coding protein_coding MGP_WSBEiJ_T0044614.1 MGP_WSBEiJ_G0022445.1 mouse_genomes_project 17 10023332 10044451 + Agpat4 protein_coding processed_transcript MGP_WSBEiJ_T0044615.1 MGP_WSBEiJ_G0022445.1 mouse_genomes_project 17 10038399 10116992 + MGP_WSBEiJ_P0044615 Agpat4 protein_coding protein_coding MGP_WSBEiJ_T0044616.1 MGP_WSBEiJ_G0022445.1 mouse_genomes_project 17 10058875 10125724 + MGP_WSBEiJ_P0044616 Agpat4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044617.1 MGP_WSBEiJ_G0022445.1 mouse_genomes_project 17 10121769 10125898 + Agpat4 protein_coding retained_intron MGP_WSBEiJ_T0047541.1 MGP_WSBEiJ_G0023288.1 mouse_genomes_project 17 75525815 75558940 + MGP_WSBEiJ_P0047541 protein_coding protein_coding MGP_WSBEiJ_T0045226.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419332 24506487 + MGP_WSBEiJ_P0045226 Lmf1 protein_coding protein_coding MGP_WSBEiJ_T0045227.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419335 24506487 + MGP_WSBEiJ_P0045227 Lmf1 protein_coding protein_coding MGP_WSBEiJ_T0045228.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419345 24438682 + Lmf1 protein_coding retained_intron MGP_WSBEiJ_T0045229.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419345 24506383 + MGP_WSBEiJ_P0045229 Lmf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045230.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419355 24497848 + MGP_WSBEiJ_P0045230 Lmf1 protein_coding protein_coding MGP_WSBEiJ_T0045231.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419357 24429362 + Lmf1 protein_coding retained_intron MGP_WSBEiJ_T0045232.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419357 24477634 + Lmf1 protein_coding retained_intron MGP_WSBEiJ_T0045233.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419357 24490978 + Lmf1 protein_coding retained_intron MGP_WSBEiJ_T0045234.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24419478 24473472 + Lmf1 protein_coding processed_transcript MGP_WSBEiJ_T0045235.1 MGP_WSBEiJ_G0022648.1 mouse_genomes_project 17 24498408 24499442 + MGP_WSBEiJ_P0045235 Lmf1 protein_coding protein_coding MGP_WSBEiJ_T0044774.1 MGP_WSBEiJ_G0022500.1 mouse_genomes_project 17 16449430 18468026 - MGP_WSBEiJ_P0044774 Vmn2r104 protein_coding protein_coding MGP_WSBEiJ_T0047229.1 MGP_WSBEiJ_G0023179.1 mouse_genomes_project 17 57762056 57781937 - MGP_WSBEiJ_P0047229 Sh3gl1 protein_coding protein_coding MGP_WSBEiJ_T0011227.1 MGP_WSBEiJ_G0009384.1 mouse_genomes_project 17 44994809 44995095 - Gm24532 misc_RNA misc_RNA MGP_WSBEiJ_T0046367.1 MGP_WSBEiJ_G0022908.1 mouse_genomes_project 17 34917485 34918023 + D17H6S53E protein_coding retained_intron MGP_WSBEiJ_T0046368.1 MGP_WSBEiJ_G0022908.1 mouse_genomes_project 17 34917498 34920505 + MGP_WSBEiJ_P0046368 D17H6S53E protein_coding protein_coding MGP_WSBEiJ_T0012945.1 MGP_WSBEiJ_G0011075.1 mouse_genomes_project 17 38387344 38387994 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045620.1 MGP_WSBEiJ_G0022736.1 mouse_genomes_project 17 27910063 27919933 + MGP_WSBEiJ_P0045620 Mapk13 protein_coding protein_coding MGP_WSBEiJ_T0045621.1 MGP_WSBEiJ_G0022736.1 mouse_genomes_project 17 27910092 27919454 + Mapk13 protein_coding retained_intron MGP_WSBEiJ_T0045622.1 MGP_WSBEiJ_G0022736.1 mouse_genomes_project 17 27910105 27919781 + MGP_WSBEiJ_P0045622 Mapk13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045623.1 MGP_WSBEiJ_G0022736.1 mouse_genomes_project 17 27910128 27918829 + Mapk13 protein_coding retained_intron MGP_WSBEiJ_T0047765.1 MGP_WSBEiJ_G0023376.1 mouse_genomes_project 17 91077462 91128515 - MGP_WSBEiJ_P0047765 Kcnk12 protein_coding protein_coding MGP_WSBEiJ_T0010031.1 MGP_WSBEiJ_G0008188.1 mouse_genomes_project 17 27646883 27647009 + Gm25195 miRNA miRNA MGP_WSBEiJ_T0047415.1 MGP_WSBEiJ_G0023255.1 mouse_genomes_project 17 68290770 68313907 - MGP_WSBEiJ_P0047415 Ndufv2 protein_coding protein_coding MGP_WSBEiJ_T0047416.1 MGP_WSBEiJ_G0023255.1 mouse_genomes_project 17 68291578 68313810 - MGP_WSBEiJ_P0047416 Ndufv2 protein_coding protein_coding MGP_WSBEiJ_T0047417.1 MGP_WSBEiJ_G0023255.1 mouse_genomes_project 17 68299013 68313824 - MGP_WSBEiJ_P0047417 Ndufv2 protein_coding protein_coding MGP_WSBEiJ_T0044790.1 MGP_WSBEiJ_G0022516.1 mouse_genomes_project 17 19319789 19320740 + MGP_WSBEiJ_P0044790 Vmn1r230 protein_coding protein_coding MGP_WSBEiJ_T0045893.1 MGP_WSBEiJ_G0022806.1 mouse_genomes_project 17 32511863 32528497 - MGP_WSBEiJ_P0045893 Zfp763 protein_coding protein_coding MGP_WSBEiJ_T0045894.1 MGP_WSBEiJ_G0022806.1 mouse_genomes_project 17 32514759 32528263 - Zfp763 protein_coding processed_transcript MGP_WSBEiJ_T0044762.1 MGP_WSBEiJ_G0022489.1 mouse_genomes_project 17 16079263 16086737 - MGP_WSBEiJ_P0044762 Fpr1 protein_coding protein_coding MGP_WSBEiJ_T0047216.1 MGP_WSBEiJ_G0023175.1 mouse_genomes_project 17 57712144 57718289 + MGP_WSBEiJ_P0047216 Shd protein_coding protein_coding MGP_WSBEiJ_T0047217.1 MGP_WSBEiJ_G0023175.1 mouse_genomes_project 17 57712188 57718301 + MGP_WSBEiJ_P0047217 Shd protein_coding unknown_likely_coding MGP_WSBEiJ_T0044833.1 MGP_WSBEiJ_G0022542.1 mouse_genomes_project 17 20549036 20549828 - MGP_WSBEiJ_P0044833 Gm9772 protein_coding protein_coding MGP_WSBEiJ_T0047792.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93473090 94587190 - MGP_WSBEiJ_P0047792 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047793.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93473103 94592484 - MGP_WSBEiJ_P0047793 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047794.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93475670 93531605 - MGP_WSBEiJ_P0047794 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047795.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93475672 94587198 - MGP_WSBEiJ_P0047795 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047796.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93476068 93927429 - MGP_WSBEiJ_P0047796 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047797.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93476538 93531609 - MGP_WSBEiJ_P0047797 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047798.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93476565 93927443 - MGP_WSBEiJ_P0047798 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047799.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93476938 94587009 - MGP_WSBEiJ_P0047799 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047800.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93477122 93531349 - Nrxn1 protein_coding processed_transcript MGP_WSBEiJ_T0047801.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93477145 94587009 - MGP_WSBEiJ_P0047801 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047802.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93477161 93927507 - MGP_WSBEiJ_P0047802 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047803.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93477161 94592146 - MGP_WSBEiJ_P0047803 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047804.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93477587 93660897 - MGP_WSBEiJ_P0047804 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047805.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93613087 93815563 - Nrxn1 protein_coding processed_transcript MGP_WSBEiJ_T0047806.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93660762 94592216 - Nrxn1 protein_coding retained_intron MGP_WSBEiJ_T0047807.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93660762 93926379 - Nrxn1 protein_coding retained_intron MGP_WSBEiJ_T0047808.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93828629 94061653 - MGP_WSBEiJ_P0047808 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047809.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93828870 94061802 - MGP_WSBEiJ_P0047809 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047810.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 93925347 93928130 - Nrxn1 protein_coding retained_intron MGP_WSBEiJ_T0047811.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 94005877 94586766 - Nrxn1 protein_coding processed_transcript MGP_WSBEiJ_T0047812.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 94019173 94183513 - MGP_WSBEiJ_P0047812 Nrxn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047813.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 94062881 94105965 - MGP_WSBEiJ_P0047813 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047814.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 94063159 94179616 - MGP_WSBEiJ_P0047814 Nrxn1 protein_coding protein_coding MGP_WSBEiJ_T0047815.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 94093794 94105768 - Nrxn1 protein_coding retained_intron MGP_WSBEiJ_T0047816.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 94178771 94592184 - Nrxn1 protein_coding retained_intron MGP_WSBEiJ_T0047817.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 94182014 94592204 - Nrxn1 protein_coding retained_intron MGP_WSBEiJ_T0047818.1 MGP_WSBEiJ_G0023386.1 mouse_genomes_project 17 94583740 94592166 - Nrxn1 protein_coding retained_intron MGP_WSBEiJ_T0047189.1 MGP_WSBEiJ_G0023159.1 mouse_genomes_project 17 55120682 55158818 - MGP_WSBEiJ_P0047189 Pp2d1 protein_coding protein_coding MGP_WSBEiJ_T0046633.1 MGP_WSBEiJ_G0022967.1 mouse_genomes_project 17 37221645 37225002 - MGP_WSBEiJ_P0046633 Ppp1r11 protein_coding protein_coding MGP_WSBEiJ_T0046634.1 MGP_WSBEiJ_G0022967.1 mouse_genomes_project 17 37222578 37225030 - MGP_WSBEiJ_P0046634 Ppp1r11 protein_coding protein_coding MGP_WSBEiJ_T0046635.1 MGP_WSBEiJ_G0022967.1 mouse_genomes_project 17 37222643 37224627 - MGP_WSBEiJ_P0046635 Ppp1r11 protein_coding protein_coding MGP_WSBEiJ_T0047254.1 MGP_WSBEiJ_G0023193.1 mouse_genomes_project 17 58037319 58051797 - MGP_WSBEiJ_P0047254 Plin3 protein_coding protein_coding MGP_WSBEiJ_T0044639.1 MGP_WSBEiJ_G0022455.1 mouse_genomes_project 17 10829892 10835133 - MGP_WSBEiJ_P0044639 Mrpl18 protein_coding protein_coding MGP_WSBEiJ_T0044640.1 MGP_WSBEiJ_G0022455.1 mouse_genomes_project 17 10832389 10834412 - Mrpl18 protein_coding processed_transcript MGP_WSBEiJ_T0044641.1 MGP_WSBEiJ_G0022455.1 mouse_genomes_project 17 10832494 10834891 - Mrpl18 protein_coding retained_intron MGP_WSBEiJ_T0044642.1 MGP_WSBEiJ_G0022455.1 mouse_genomes_project 17 10832538 10834990 - Mrpl18 protein_coding processed_transcript MGP_WSBEiJ_T0044643.1 MGP_WSBEiJ_G0022455.1 mouse_genomes_project 17 10834289 10834857 - Mrpl18 protein_coding retained_intron MGP_WSBEiJ_T0047188.1 MGP_WSBEiJ_G0023158.1 mouse_genomes_project 17 55092079 55120894 + MGP_WSBEiJ_P0047188 Rab5a protein_coding protein_coding MGP_WSBEiJ_T0047259.1 MGP_WSBEiJ_G0023196.1 mouse_genomes_project 17 58095486 58126883 + MGP_WSBEiJ_P0047259 Kdm4b protein_coding protein_coding MGP_WSBEiJ_T0047260.1 MGP_WSBEiJ_G0023196.1 mouse_genomes_project 17 58095498 58174775 + MGP_WSBEiJ_P0047260 Kdm4b protein_coding protein_coding MGP_WSBEiJ_T0047261.1 MGP_WSBEiJ_G0023196.1 mouse_genomes_project 17 58095515 58174770 + MGP_WSBEiJ_P0047261 Kdm4b protein_coding protein_coding MGP_WSBEiJ_T0047262.1 MGP_WSBEiJ_G0023196.1 mouse_genomes_project 17 58144213 58158025 + Kdm4b protein_coding processed_transcript MGP_WSBEiJ_T0047263.1 MGP_WSBEiJ_G0023196.1 mouse_genomes_project 17 58165426 58165695 + Kdm4b protein_coding processed_transcript MGP_WSBEiJ_T0047264.1 MGP_WSBEiJ_G0023196.1 mouse_genomes_project 17 58165829 58174781 + MGP_WSBEiJ_P0047264 Kdm4b protein_coding protein_coding MGP_WSBEiJ_T0097990.1 MGP_WSBEiJ_G0036653.1 mouse_genomes_project 17 29573996 29574069 + Gm25049 snRNA snRNA MGP_WSBEiJ_T0047561.1 MGP_WSBEiJ_G0023300.1 mouse_genomes_project 17 77184180 77198709 + MGP_WSBEiJ_P0047561 Yipf4 protein_coding protein_coding MGP_WSBEiJ_T0006857.1 MGP_WSBEiJ_G0005650.1 mouse_genomes_project 17 50549209 50550475 - 1700008K24Rik lincRNA lincRNA MGP_WSBEiJ_T0006858.1 MGP_WSBEiJ_G0005650.1 mouse_genomes_project 17 50549209 50550462 - 1700008K24Rik lincRNA lincRNA MGP_WSBEiJ_T0006859.1 MGP_WSBEiJ_G0005650.1 mouse_genomes_project 17 50549211 50550440 - 1700008K24Rik lincRNA lincRNA MGP_WSBEiJ_T0006860.1 MGP_WSBEiJ_G0005650.1 mouse_genomes_project 17 50549211 50550383 - 1700008K24Rik lincRNA lincRNA MGP_WSBEiJ_T0006861.1 MGP_WSBEiJ_G0005650.1 mouse_genomes_project 17 50549319 50550482 - 1700008K24Rik lincRNA lincRNA MGP_WSBEiJ_T0003686.1 MGP_WSBEiJ_G0003320.1 mouse_genomes_project 17 36016778 36022782 + antisense antisense MGP_WSBEiJ_T0046681.1 MGP_WSBEiJ_G0022980.1 mouse_genomes_project 17 37527155 37528129 - MGP_WSBEiJ_P0046681 Olfr95 protein_coding protein_coding MGP_WSBEiJ_T0010029.1 MGP_WSBEiJ_G0008186.1 mouse_genomes_project 17 26358032 26358094 + Mir7217 miRNA miRNA MGP_WSBEiJ_T0012907.1 MGP_WSBEiJ_G0011037.1 mouse_genomes_project 17 10729229 10729974 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046327.1 MGP_WSBEiJ_G0022897.1 mouse_genomes_project 17 34845674 34848678 + MGP_WSBEiJ_P0046327 Ddah2 protein_coding protein_coding MGP_WSBEiJ_T0046328.1 MGP_WSBEiJ_G0022897.1 mouse_genomes_project 17 34846398 34847489 + MGP_WSBEiJ_P0046328 Ddah2 protein_coding protein_coding MGP_WSBEiJ_T0046329.1 MGP_WSBEiJ_G0022897.1 mouse_genomes_project 17 34847475 34848208 + Ddah2 protein_coding retained_intron MGP_WSBEiJ_T0100603.1 MGP_WSBEiJ_G0039061.1 mouse_genomes_project 17 11532038 11534335 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045476.1 MGP_WSBEiJ_G0022707.1 mouse_genomes_project 17 26427667 26512427 - MGP_WSBEiJ_P0045476 Grm4 protein_coding protein_coding MGP_WSBEiJ_T0045477.1 MGP_WSBEiJ_G0022707.1 mouse_genomes_project 17 26431195 26523881 - MGP_WSBEiJ_P0045477 Grm4 protein_coding protein_coding MGP_WSBEiJ_T0045478.1 MGP_WSBEiJ_G0022707.1 mouse_genomes_project 17 26457201 26478666 - Grm4 protein_coding retained_intron MGP_WSBEiJ_T0045479.1 MGP_WSBEiJ_G0022707.1 mouse_genomes_project 17 26458674 26478417 - Grm4 protein_coding processed_transcript MGP_WSBEiJ_T0045859.1 MGP_WSBEiJ_G0022792.1 mouse_genomes_project 17 31809967 31817741 - MGP_WSBEiJ_P0045859 Pglyrp2 protein_coding protein_coding MGP_WSBEiJ_T0045860.1 MGP_WSBEiJ_G0022792.1 mouse_genomes_project 17 31810228 31824704 - MGP_WSBEiJ_P0045860 Pglyrp2 protein_coding protein_coding MGP_WSBEiJ_T0096996.1 MGP_WSBEiJ_G0035677.1 mouse_genomes_project 17 81350472 81350583 - Gm22562 rRNA rRNA MGP_WSBEiJ_T0010010.1 MGP_WSBEiJ_G0008167.1 mouse_genomes_project 17 16033198 16033315 - Gm25927 miRNA miRNA MGP_WSBEiJ_T0012941.1 MGP_WSBEiJ_G0011071.1 mouse_genomes_project 17 38292811 38293469 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0016972.1 MGP_WSBEiJ_G0014769.1 mouse_genomes_project 17 34331370 34347393 - Gm20460 processed_transcript processed_transcript MGP_WSBEiJ_T0044883.1 MGP_WSBEiJ_G0022558.1 mouse_genomes_project 17 22369812 22372894 + MGP_WSBEiJ_P0044883 Cldn6 protein_coding protein_coding MGP_WSBEiJ_T0006808.1 MGP_WSBEiJ_G0005610.1 mouse_genomes_project 17 22431966 22440766 + 9530082P21Rik lincRNA lincRNA MGP_WSBEiJ_T0006809.1 MGP_WSBEiJ_G0005610.1 mouse_genomes_project 17 22439092 22443930 + 9530082P21Rik lincRNA lincRNA MGP_WSBEiJ_T0006810.1 MGP_WSBEiJ_G0005610.1 mouse_genomes_project 17 22439193 22441058 + 9530082P21Rik lincRNA lincRNA MGP_WSBEiJ_T0012977.1 MGP_WSBEiJ_G0011107.1 mouse_genomes_project 17 91332656 91332790 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045484.1 MGP_WSBEiJ_G0022709.1 mouse_genomes_project 17 26579559 26581717 - MGP_WSBEiJ_P0045484 AI413582 protein_coding protein_coding MGP_WSBEiJ_T0045485.1 MGP_WSBEiJ_G0022709.1 mouse_genomes_project 17 26579755 26581693 - MGP_WSBEiJ_P0045485 AI413582 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045486.1 MGP_WSBEiJ_G0022709.1 mouse_genomes_project 17 26579757 26581734 - AI413582 protein_coding retained_intron MGP_WSBEiJ_T0045487.1 MGP_WSBEiJ_G0022709.1 mouse_genomes_project 17 26580666 26581652 - AI413582 protein_coding processed_transcript MGP_WSBEiJ_T0047650.1 MGP_WSBEiJ_G0023330.1 mouse_genomes_project 17 83160926 83214833 - MGP_WSBEiJ_P0047650 Dhx57 protein_coding protein_coding MGP_WSBEiJ_T0047651.1 MGP_WSBEiJ_G0023330.1 mouse_genomes_project 17 83160926 83214833 - MGP_WSBEiJ_P0047651 Dhx57 protein_coding protein_coding MGP_WSBEiJ_T0045881.1 MGP_WSBEiJ_G0022803.1 mouse_genomes_project 17 32415886 32440274 - MGP_WSBEiJ_P0045881 Cyp4f13 protein_coding protein_coding MGP_WSBEiJ_T0045882.1 MGP_WSBEiJ_G0022803.1 mouse_genomes_project 17 32415899 32440251 - MGP_WSBEiJ_P0045882 Cyp4f13 protein_coding protein_coding MGP_WSBEiJ_T0045883.1 MGP_WSBEiJ_G0022803.1 mouse_genomes_project 17 32415914 32440238 - MGP_WSBEiJ_P0045883 Cyp4f13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045884.1 MGP_WSBEiJ_G0022803.1 mouse_genomes_project 17 32416523 32417077 - Cyp4f13 protein_coding retained_intron MGP_WSBEiJ_T0045885.1 MGP_WSBEiJ_G0022803.1 mouse_genomes_project 17 32424630 32440274 - MGP_WSBEiJ_P0045885 Cyp4f13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045886.1 MGP_WSBEiJ_G0022803.1 mouse_genomes_project 17 32424842 32440232 - MGP_WSBEiJ_P0045886 Cyp4f13 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045887.1 MGP_WSBEiJ_G0022803.1 mouse_genomes_project 17 32432696 32440263 - Cyp4f13 protein_coding retained_intron MGP_WSBEiJ_T0003650.1 MGP_WSBEiJ_G0003292.1 mouse_genomes_project 17 23519694 23520128 - Snhg9 antisense antisense MGP_WSBEiJ_T0045365.1 MGP_WSBEiJ_G0022679.1 mouse_genomes_project 17 24983588 24993533 + MGP_WSBEiJ_P0045365 Tmem8 protein_coding protein_coding MGP_WSBEiJ_T0045366.1 MGP_WSBEiJ_G0022679.1 mouse_genomes_project 17 24989719 24993533 + MGP_WSBEiJ_P0045366 Tmem8 protein_coding protein_coding MGP_WSBEiJ_T0100639.1 MGP_WSBEiJ_G0039097.1 mouse_genomes_project 17 34980260 34986724 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045444.1 MGP_WSBEiJ_G0022696.1 mouse_genomes_project 17 25876999 25881283 + MGP_WSBEiJ_P0045444 unknown_likely_coding unknown_likely_coding MGP_WSBEiJ_T0044523.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 3869236 4083003 + protein_coding retained_intron MGP_WSBEiJ_T0044524.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 3943725 3984967 + MGP_WSBEiJ_P0044524 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044525.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 3943725 3984963 + MGP_WSBEiJ_P0044525 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044526.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 4020268 4027716 + protein_coding processed_transcript MGP_WSBEiJ_T0044527.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 4020393 4069850 + MGP_WSBEiJ_P0044527 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044528.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 4020420 4086565 + MGP_WSBEiJ_P0044528 protein_coding protein_coding MGP_WSBEiJ_T0044529.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 4020420 4086565 + MGP_WSBEiJ_P0044529 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044530.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 4020420 4086565 + MGP_WSBEiJ_P0044530 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044531.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 4047644 4086771 + MGP_WSBEiJ_P0044531 protein_coding protein_coding MGP_WSBEiJ_T0044532.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 4057204 4086565 + MGP_WSBEiJ_P0044532 protein_coding protein_coding MGP_WSBEiJ_T0044533.1 MGP_WSBEiJ_G0022417.1 mouse_genomes_project 17 4057204 4086565 + MGP_WSBEiJ_P0044533 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012899.1 MGP_WSBEiJ_G0011029.1 mouse_genomes_project 17 5268854 5269434 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012956.1 MGP_WSBEiJ_G0011086.1 mouse_genomes_project 17 55603846 55604973 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045416.1 MGP_WSBEiJ_G0022690.1 mouse_genomes_project 17 25424705 25427635 - MGP_WSBEiJ_P0045416 Dusp1 protein_coding protein_coding MGP_WSBEiJ_T0045417.1 MGP_WSBEiJ_G0022690.1 mouse_genomes_project 17 25424706 25427590 - Dusp1 protein_coding retained_intron MGP_WSBEiJ_T0045418.1 MGP_WSBEiJ_G0022690.1 mouse_genomes_project 17 25425631 25426839 - Dusp1 protein_coding retained_intron MGP_WSBEiJ_T0047433.1 MGP_WSBEiJ_G0023259.1 mouse_genomes_project 17 68755314 68780413 - MGP_WSBEiJ_P0047433 Rab12 protein_coding protein_coding MGP_WSBEiJ_T0047434.1 MGP_WSBEiJ_G0023259.1 mouse_genomes_project 17 68758516 68761352 - Rab12 protein_coding retained_intron MGP_WSBEiJ_T0047435.1 MGP_WSBEiJ_G0023259.1 mouse_genomes_project 17 68761381 68780076 - Rab12 protein_coding processed_transcript MGP_WSBEiJ_T0047436.1 MGP_WSBEiJ_G0023259.1 mouse_genomes_project 17 68766636 68780409 - Rab12 protein_coding retained_intron MGP_WSBEiJ_T0044746.1 MGP_WSBEiJ_G0022486.1 mouse_genomes_project 17 15891270 15925700 + MGP_WSBEiJ_P0044746 Vmn2r90 protein_coding protein_coding MGP_WSBEiJ_T0010061.1 MGP_WSBEiJ_G0008218.1 mouse_genomes_project 17 73335239 73335337 - Mir1195 miRNA miRNA MGP_WSBEiJ_T0045363.1 MGP_WSBEiJ_G0022678.1 mouse_genomes_project 17 24959729 24964001 - MGP_WSBEiJ_P0045363 Nme4 protein_coding protein_coding MGP_WSBEiJ_T0045364.1 MGP_WSBEiJ_G0022678.1 mouse_genomes_project 17 24961908 24963966 - Nme4 protein_coding retained_intron MGP_WSBEiJ_T0047620.1 MGP_WSBEiJ_G0023317.1 mouse_genomes_project 17 81772668 81786184 + MGP_WSBEiJ_P0047620 Ndufaf7 protein_coding protein_coding MGP_WSBEiJ_T0016991.1 MGP_WSBEiJ_G0014772.1 mouse_genomes_project 17 37594537 37596546 + processed_transcript retained_intron MGP_WSBEiJ_T0046650.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37278031 37290094 + MGP_WSBEiJ_P0046650 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046651.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37281979 37288904 + MGP_WSBEiJ_P0046651 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046652.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37282022 37290094 + MGP_WSBEiJ_P0046652 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046653.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37282051 37285544 + MGP_WSBEiJ_P0046653 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046654.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37282066 37283320 + Zfp57 protein_coding retained_intron MGP_WSBEiJ_T0046655.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37282074 37283198 + Zfp57 protein_coding retained_intron MGP_WSBEiJ_T0046656.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37282093 37289285 + MGP_WSBEiJ_P0046656 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046657.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37282109 37285529 + MGP_WSBEiJ_P0046657 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046658.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37282167 37289208 + MGP_WSBEiJ_P0046658 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046659.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37282535 37290097 + MGP_WSBEiJ_P0046659 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046660.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37283163 37290094 + MGP_WSBEiJ_P0046660 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046661.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37284027 37289177 + MGP_WSBEiJ_P0046661 Zfp57 protein_coding protein_coding MGP_WSBEiJ_T0046662.1 MGP_WSBEiJ_G0022972.1 mouse_genomes_project 17 37284108 37285711 + Zfp57 protein_coding retained_intron MGP_WSBEiJ_T0047350.1 MGP_WSBEiJ_G0023232.1 mouse_genomes_project 17 59106263 59121348 + MGP_WSBEiJ_P0047350 Trip10 protein_coding protein_coding MGP_WSBEiJ_T0047351.1 MGP_WSBEiJ_G0023232.1 mouse_genomes_project 17 59106360 59120799 + MGP_WSBEiJ_P0047351 Trip10 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044896.1 MGP_WSBEiJ_G0022565.1 mouse_genomes_project 17 22466469 22476935 - MGP_WSBEiJ_P0044896 Flywch2 protein_coding protein_coding MGP_WSBEiJ_T0044897.1 MGP_WSBEiJ_G0022565.1 mouse_genomes_project 17 22466512 22469349 - MGP_WSBEiJ_P0044897 Flywch2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044898.1 MGP_WSBEiJ_G0022565.1 mouse_genomes_project 17 22466545 22476906 - MGP_WSBEiJ_P0044898 Flywch2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044599.1 MGP_WSBEiJ_G0022441.1 mouse_genomes_project 17 7486870 7490078 - MGP_WSBEiJ_P0044599 Pabpc6 protein_coding protein_coding MGP_WSBEiJ_T0045204.1 MGP_WSBEiJ_G0022643.1 mouse_genomes_project 17 24192509 24197645 + MGP_WSBEiJ_P0045204 Tpsg1 protein_coding protein_coding MGP_WSBEiJ_T0045205.1 MGP_WSBEiJ_G0022643.1 mouse_genomes_project 17 24192525 24197354 + MGP_WSBEiJ_P0045205 Tpsg1 protein_coding protein_coding MGP_WSBEiJ_T0045206.1 MGP_WSBEiJ_G0022643.1 mouse_genomes_project 17 24193744 24197645 + MGP_WSBEiJ_P0045206 Tpsg1 protein_coding protein_coding MGP_WSBEiJ_T0045207.1 MGP_WSBEiJ_G0022643.1 mouse_genomes_project 17 24193775 24197647 + MGP_WSBEiJ_P0045207 Tpsg1 protein_coding protein_coding MGP_WSBEiJ_T0045208.1 MGP_WSBEiJ_G0022643.1 mouse_genomes_project 17 24196213 24197590 + MGP_WSBEiJ_P0045208 Tpsg1 protein_coding protein_coding MGP_WSBEiJ_T0010035.1 MGP_WSBEiJ_G0008192.1 mouse_genomes_project 17 31784274 31784333 + Gm22201 miRNA miRNA MGP_WSBEiJ_T0044811.1 MGP_WSBEiJ_G0022528.1 mouse_genomes_project 17 19938811 19955327 + MGP_WSBEiJ_P0044811 Zfp51 protein_coding protein_coding MGP_WSBEiJ_T0099236.1 MGP_WSBEiJ_G0037899.1 mouse_genomes_project 17 23520941 23521075 + Snora64 snoRNA snoRNA MGP_WSBEiJ_T0045130.1 MGP_WSBEiJ_G0022625.1 mouse_genomes_project 17 23827318 23902107 + MGP_WSBEiJ_P0045130 Ift140 protein_coding protein_coding MGP_WSBEiJ_T0045131.1 MGP_WSBEiJ_G0022625.1 mouse_genomes_project 17 23827618 23910210 + MGP_WSBEiJ_P0045131 Ift140 protein_coding protein_coding MGP_WSBEiJ_T0045132.1 MGP_WSBEiJ_G0022625.1 mouse_genomes_project 17 23827626 23830136 + Ift140 protein_coding processed_transcript MGP_WSBEiJ_T0045133.1 MGP_WSBEiJ_G0022625.1 mouse_genomes_project 17 23836857 23906036 + Ift140 protein_coding retained_intron MGP_WSBEiJ_T0045134.1 MGP_WSBEiJ_G0022625.1 mouse_genomes_project 17 23837093 23848140 + MGP_WSBEiJ_P0045134 Ift140 protein_coding protein_coding MGP_WSBEiJ_T0045135.1 MGP_WSBEiJ_G0022625.1 mouse_genomes_project 17 23855460 23897041 + Ift140 protein_coding processed_transcript MGP_WSBEiJ_T0045136.1 MGP_WSBEiJ_G0022625.1 mouse_genomes_project 17 23855509 23910218 + Ift140 protein_coding processed_transcript MGP_WSBEiJ_T0045139.1 MGP_WSBEiJ_G0022625.1 mouse_genomes_project 17 23899710 23902450 + Ift140 protein_coding retained_intron MGP_WSBEiJ_T0046594.1 MGP_WSBEiJ_G0022956.1 mouse_genomes_project 17 36364995 36367225 - MGP_WSBEiJ_P0046594 Rpp21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046595.1 MGP_WSBEiJ_G0022956.1 mouse_genomes_project 17 36365017 36367212 - Rpp21 protein_coding retained_intron MGP_WSBEiJ_T0046596.1 MGP_WSBEiJ_G0022956.1 mouse_genomes_project 17 36365017 36367424 - MGP_WSBEiJ_P0046596 Rpp21 protein_coding protein_coding MGP_WSBEiJ_T0046597.1 MGP_WSBEiJ_G0022956.1 mouse_genomes_project 17 36365023 36365700 - Rpp21 protein_coding retained_intron MGP_WSBEiJ_T0046598.1 MGP_WSBEiJ_G0022956.1 mouse_genomes_project 17 36365062 36366979 - MGP_WSBEiJ_P0046598 Rpp21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046599.1 MGP_WSBEiJ_G0022956.1 mouse_genomes_project 17 36365294 36367224 - Rpp21 protein_coding retained_intron MGP_WSBEiJ_T0045724.1 MGP_WSBEiJ_G0022759.1 mouse_genomes_project 17 28920157 28950466 - MGP_WSBEiJ_P0045724 Ccdc167 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045725.1 MGP_WSBEiJ_G0022759.1 mouse_genomes_project 17 28930189 28950442 - MGP_WSBEiJ_P0045725 Ccdc167 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045726.1 MGP_WSBEiJ_G0022759.1 mouse_genomes_project 17 28930935 28950466 - MGP_WSBEiJ_P0045726 Ccdc167 protein_coding protein_coding MGP_WSBEiJ_T0045727.1 MGP_WSBEiJ_G0022759.1 mouse_genomes_project 17 28932613 28950420 - MGP_WSBEiJ_P0045727 Ccdc167 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045728.1 MGP_WSBEiJ_G0022759.1 mouse_genomes_project 17 28935946 28950469 - MGP_WSBEiJ_P0045728 Ccdc167 protein_coding protein_coding MGP_WSBEiJ_T0045729.1 MGP_WSBEiJ_G0022759.1 mouse_genomes_project 17 28945587 28950421 - Ccdc167 protein_coding processed_transcript MGP_WSBEiJ_T0003657.1 MGP_WSBEiJ_G0003299.1 mouse_genomes_project 17 28004623 28009000 - Pnpla1os antisense antisense MGP_WSBEiJ_T0046712.1 MGP_WSBEiJ_G0023008.1 mouse_genomes_project 17 38470777 38473664 - MGP_WSBEiJ_P0046712 Olfr129 protein_coding protein_coding MGP_WSBEiJ_T0046430.1 MGP_WSBEiJ_G0022924.1 mouse_genomes_project 17 35454879 35458944 - MGP_WSBEiJ_P0046430 Tcf19 protein_coding protein_coding MGP_WSBEiJ_T0046431.1 MGP_WSBEiJ_G0022924.1 mouse_genomes_project 17 35454882 35458905 - MGP_WSBEiJ_P0046431 Tcf19 protein_coding protein_coding MGP_WSBEiJ_T0046432.1 MGP_WSBEiJ_G0022924.1 mouse_genomes_project 17 35456773 35458940 - MGP_WSBEiJ_P0046432 Tcf19 protein_coding protein_coding MGP_WSBEiJ_T0046433.1 MGP_WSBEiJ_G0022924.1 mouse_genomes_project 17 35456937 35458667 - MGP_WSBEiJ_P0046433 Tcf19 protein_coding protein_coding MGP_WSBEiJ_T0044723.1 MGP_WSBEiJ_G0022479.1 mouse_genomes_project 17 13634776 13642799 - MGP_WSBEiJ_P0044723 Pdcd2 protein_coding protein_coding MGP_WSBEiJ_T0044724.1 MGP_WSBEiJ_G0022479.1 mouse_genomes_project 17 13637148 13642819 - MGP_WSBEiJ_P0044724 Pdcd2 protein_coding protein_coding MGP_WSBEiJ_T0044725.1 MGP_WSBEiJ_G0022479.1 mouse_genomes_project 17 13637166 13637708 - Pdcd2 protein_coding retained_intron MGP_WSBEiJ_T0044726.1 MGP_WSBEiJ_G0022479.1 mouse_genomes_project 17 13638267 13642602 - Pdcd2 protein_coding retained_intron MGP_WSBEiJ_T0044727.1 MGP_WSBEiJ_G0022479.1 mouse_genomes_project 17 13638355 13642504 - Pdcd2 protein_coding retained_intron MGP_WSBEiJ_T0045036.1 MGP_WSBEiJ_G0022599.1 mouse_genomes_project 17 23417327 23423463 + MGP_WSBEiJ_P0045036 Nthl1 protein_coding protein_coding MGP_WSBEiJ_T0006798.1 MGP_WSBEiJ_G0005600.1 mouse_genomes_project 17 11480069 11490203 + lincRNA lincRNA MGP_WSBEiJ_T0045273.1 MGP_WSBEiJ_G0022661.1 mouse_genomes_project 17 24677569 24680532 + MGP_WSBEiJ_P0045273 Jmjd8 protein_coding protein_coding MGP_WSBEiJ_T0045274.1 MGP_WSBEiJ_G0022661.1 mouse_genomes_project 17 24677745 24680534 + MGP_WSBEiJ_P0045274 Jmjd8 protein_coding protein_coding MGP_WSBEiJ_T0045275.1 MGP_WSBEiJ_G0022661.1 mouse_genomes_project 17 24677766 24678853 + Jmjd8 protein_coding retained_intron MGP_WSBEiJ_T0045276.1 MGP_WSBEiJ_G0022661.1 mouse_genomes_project 17 24677773 24679317 + MGP_WSBEiJ_P0045276 Jmjd8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045277.1 MGP_WSBEiJ_G0022661.1 mouse_genomes_project 17 24677822 24679325 + MGP_WSBEiJ_P0045277 Jmjd8 protein_coding protein_coding MGP_WSBEiJ_T0045278.1 MGP_WSBEiJ_G0022661.1 mouse_genomes_project 17 24677823 24679053 + Jmjd8 protein_coding retained_intron MGP_WSBEiJ_T0045279.1 MGP_WSBEiJ_G0022661.1 mouse_genomes_project 17 24677999 24679218 + Jmjd8 protein_coding retained_intron MGP_WSBEiJ_T0045280.1 MGP_WSBEiJ_G0022661.1 mouse_genomes_project 17 24678541 24679413 + Jmjd8 protein_coding retained_intron MGP_WSBEiJ_T0000951.1 MGP_WSBEiJ_G0000887.1 mouse_genomes_project 17 9613765 9620231 - TEC TEC MGP_WSBEiJ_T0096999.1 MGP_WSBEiJ_G0035680.1 mouse_genomes_project 17 98371489 98371596 + Gm23964 rRNA rRNA MGP_WSBEiJ_T0003704.1 MGP_WSBEiJ_G0003333.1 mouse_genomes_project 17 58867267 58872716 + Gm17168 antisense antisense MGP_WSBEiJ_T0045246.1 MGP_WSBEiJ_G0022652.1 mouse_genomes_project 17 24582226 24597134 + MGP_WSBEiJ_P0045246 Mslnl protein_coding protein_coding MGP_WSBEiJ_T0045247.1 MGP_WSBEiJ_G0022652.1 mouse_genomes_project 17 24582263 24597141 + MGP_WSBEiJ_P0045247 Mslnl protein_coding unknown_likely_coding MGP_WSBEiJ_T0011219.1 MGP_WSBEiJ_G0009376.1 mouse_genomes_project 17 15981130 15981416 + Gm23837 misc_RNA misc_RNA MGP_WSBEiJ_T0047250.1 MGP_WSBEiJ_G0023189.1 mouse_genomes_project 17 57939166 57971270 - MGP_WSBEiJ_P0047250 Dpp9 protein_coding protein_coding MGP_WSBEiJ_T0047452.1 MGP_WSBEiJ_G0023267.1 mouse_genomes_project 17 71549502 71686011 + MGP_WSBEiJ_P0047452 Epb41l3 protein_coding protein_coding MGP_WSBEiJ_T0047453.1 MGP_WSBEiJ_G0023267.1 mouse_genomes_project 17 71549502 71686011 + MGP_WSBEiJ_P0047453 Epb41l3 protein_coding protein_coding MGP_WSBEiJ_T0047454.1 MGP_WSBEiJ_G0023267.1 mouse_genomes_project 17 71602540 71686017 + MGP_WSBEiJ_P0047454 Epb41l3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0010065.1 MGP_WSBEiJ_G0008222.1 mouse_genomes_project 17 94586688 94586833 + miRNA miRNA MGP_WSBEiJ_T0006848.1 MGP_WSBEiJ_G0005642.1 mouse_genomes_project 17 36357625 36363038 + Gm20546 lincRNA lincRNA MGP_WSBEiJ_T0010034.1 MGP_WSBEiJ_G0008191.1 mouse_genomes_project 17 30263911 30264025 + Gm24026 miRNA miRNA MGP_WSBEiJ_T0045888.1 MGP_WSBEiJ_G0022804.1 mouse_genomes_project 17 32457958 32471840 + MGP_WSBEiJ_P0045888 Zfp472 protein_coding protein_coding MGP_WSBEiJ_T0047204.1 MGP_WSBEiJ_G0023166.1 mouse_genomes_project 17 57207329 57246363 + MGP_WSBEiJ_P0047204 St6gal2 protein_coding protein_coding MGP_WSBEiJ_T0047205.1 MGP_WSBEiJ_G0023166.1 mouse_genomes_project 17 57207336 57263523 + MGP_WSBEiJ_P0047205 St6gal2 protein_coding protein_coding MGP_WSBEiJ_T0047206.1 MGP_WSBEiJ_G0023166.1 mouse_genomes_project 17 57207497 57278130 + MGP_WSBEiJ_P0047206 St6gal2 protein_coding protein_coding MGP_WSBEiJ_T0047207.1 MGP_WSBEiJ_G0023166.1 mouse_genomes_project 17 57208191 57245699 + St6gal2 protein_coding processed_transcript MGP_WSBEiJ_T0046997.1 MGP_WSBEiJ_G0023110.1 mouse_genomes_project 17 48141489 48156089 + MGP_WSBEiJ_P0046997 Prph2 protein_coding protein_coding MGP_WSBEiJ_T0046998.1 MGP_WSBEiJ_G0023110.1 mouse_genomes_project 17 48141508 48151496 + Prph2 protein_coding retained_intron MGP_WSBEiJ_T0010023.1 MGP_WSBEiJ_G0008180.1 mouse_genomes_project 17 25505057 25505183 - Gm22420 miRNA miRNA MGP_WSBEiJ_T0047202.1 MGP_WSBEiJ_G0023164.1 mouse_genomes_project 17 56005148 56032991 - MGP_WSBEiJ_P0047202 Slc5a7 protein_coding protein_coding MGP_WSBEiJ_T0046687.1 MGP_WSBEiJ_G0022986.1 mouse_genomes_project 17 37711072 37712014 - MGP_WSBEiJ_P0046687 Olfr103 protein_coding protein_coding MGP_WSBEiJ_T0046688.1 MGP_WSBEiJ_G0022986.1 mouse_genomes_project 17 37711072 37714409 - MGP_WSBEiJ_P0046688 Olfr103 protein_coding protein_coding MGP_WSBEiJ_T0046946.1 MGP_WSBEiJ_G0023088.1 mouse_genomes_project 17 47598257 47601078 - MGP_WSBEiJ_P0046946 Gm5093 protein_coding protein_coding MGP_WSBEiJ_T0047547.1 MGP_WSBEiJ_G0023290.1 mouse_genomes_project 17 75939858 76038661 - MGP_WSBEiJ_P0047547 Capn13 protein_coding protein_coding MGP_WSBEiJ_T0047717.1 MGP_WSBEiJ_G0023360.1 mouse_genomes_project 17 89198656 89368571 - MGP_WSBEiJ_P0047717 Srbd1 protein_coding protein_coding MGP_WSBEiJ_T0047328.1 MGP_WSBEiJ_G0023222.1 mouse_genomes_project 17 58869287 58893060 - MGP_WSBEiJ_P0047328 Slc25a23 protein_coding protein_coding MGP_WSBEiJ_T0047329.1 MGP_WSBEiJ_G0023222.1 mouse_genomes_project 17 58870775 58883486 - MGP_WSBEiJ_P0047329 Slc25a23 protein_coding protein_coding MGP_WSBEiJ_T0047330.1 MGP_WSBEiJ_G0023222.1 mouse_genomes_project 17 58871061 58884491 - MGP_WSBEiJ_P0047330 Slc25a23 protein_coding protein_coding MGP_WSBEiJ_T0047331.1 MGP_WSBEiJ_G0023222.1 mouse_genomes_project 17 58872623 58884244 - MGP_WSBEiJ_P0047331 Slc25a23 protein_coding protein_coding MGP_WSBEiJ_T0047332.1 MGP_WSBEiJ_G0023222.1 mouse_genomes_project 17 58872767 58886047 - MGP_WSBEiJ_P0047332 Slc25a23 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047333.1 MGP_WSBEiJ_G0023222.1 mouse_genomes_project 17 58888490 58893016 - Slc25a23 protein_coding retained_intron MGP_WSBEiJ_T0046698.1 MGP_WSBEiJ_G0022995.1 mouse_genomes_project 17 37956922 37957917 - MGP_WSBEiJ_P0046698 protein_coding protein_coding MGP_WSBEiJ_T0045464.1 MGP_WSBEiJ_G0022702.1 mouse_genomes_project 17 25986388 25997942 - MGP_WSBEiJ_P0045464 Bak1 protein_coding protein_coding MGP_WSBEiJ_T0045465.1 MGP_WSBEiJ_G0022702.1 mouse_genomes_project 17 25986390 25997511 - MGP_WSBEiJ_P0045465 Bak1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045466.1 MGP_WSBEiJ_G0022702.1 mouse_genomes_project 17 25990862 25997520 - Bak1 protein_coding processed_transcript MGP_WSBEiJ_T0012952.1 MGP_WSBEiJ_G0011082.1 mouse_genomes_project 17 55222556 55223039 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000969.1 MGP_WSBEiJ_G0000904.1 mouse_genomes_project 17 87110403 87114468 - TEC TEC MGP_WSBEiJ_T0096992.1 MGP_WSBEiJ_G0035673.1 mouse_genomes_project 17 48541655 48541728 + Gm26216 rRNA rRNA MGP_WSBEiJ_T0000954.1 MGP_WSBEiJ_G0000889.1 mouse_genomes_project 17 30871790 30876169 - TEC TEC MGP_WSBEiJ_T0006823.1 MGP_WSBEiJ_G0005622.1 mouse_genomes_project 17 28186722 28187832 + Gm16195 lincRNA lincRNA MGP_WSBEiJ_T0006813.1 MGP_WSBEiJ_G0005613.1 mouse_genomes_project 17 24847065 24849709 + 1700022N22Rik lincRNA lincRNA MGP_WSBEiJ_T0010020.1 MGP_WSBEiJ_G0008177.1 mouse_genomes_project 17 24595591 24595683 - Gm25083 miRNA miRNA MGP_WSBEiJ_T0006793.1 MGP_WSBEiJ_G0005596.1 mouse_genomes_project 17 6137695 6149853 - Gm16702 lincRNA lincRNA MGP_WSBEiJ_T0046708.1 MGP_WSBEiJ_G0023005.1 mouse_genomes_project 17 38249516 38250634 + MGP_WSBEiJ_P0046708 Olfr125 protein_coding protein_coding MGP_WSBEiJ_T0003635.1 MGP_WSBEiJ_G0003284.1 mouse_genomes_project 17 8349250 8424331 + Gm16168 antisense antisense MGP_WSBEiJ_T0003636.1 MGP_WSBEiJ_G0003284.1 mouse_genomes_project 17 8349257 8405558 + Gm16168 antisense antisense MGP_WSBEiJ_T0046498.1 MGP_WSBEiJ_G0022937.1 mouse_genomes_project 17 35802875 35807259 - MGP_WSBEiJ_P0046498 Tubb5 protein_coding protein_coding MGP_WSBEiJ_T0046499.1 MGP_WSBEiJ_G0022937.1 mouse_genomes_project 17 35804552 35806008 - Tubb5 protein_coding retained_intron MGP_WSBEiJ_T0046500.1 MGP_WSBEiJ_G0022937.1 mouse_genomes_project 17 35804848 35807161 - MGP_WSBEiJ_P0046500 Tubb5 protein_coding protein_coding MGP_WSBEiJ_T0046501.1 MGP_WSBEiJ_G0022937.1 mouse_genomes_project 17 35805194 35807170 - Tubb5 protein_coding retained_intron MGP_WSBEiJ_T0006877.1 MGP_WSBEiJ_G0005660.1 mouse_genomes_project 17 73350475 73352059 - Gm26510 lincRNA lincRNA MGP_WSBEiJ_T0006878.1 MGP_WSBEiJ_G0005660.1 mouse_genomes_project 17 73350478 73406259 - Gm26510 lincRNA lincRNA MGP_WSBEiJ_T0047023.1 MGP_WSBEiJ_G0023118.1 mouse_genomes_project 17 48764035 48781300 - MGP_WSBEiJ_P0047023 Taf8 protein_coding protein_coding MGP_WSBEiJ_T0046749.1 MGP_WSBEiJ_G0023035.1 mouse_genomes_project 17 41820263 41835793 - MGP_WSBEiJ_P0046749 Glyatl3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045074.1 MGP_WSBEiJ_G0022612.1 mouse_genomes_project 17 23558337 23565326 + MGP_WSBEiJ_P0045074 Hs3st6 protein_coding protein_coding MGP_WSBEiJ_T0044621.1 MGP_WSBEiJ_G0022449.1 mouse_genomes_project 17 10487638 10533899 + MGP_WSBEiJ_P0044621 Slc22a2 protein_coding protein_coding MGP_WSBEiJ_T0016951.1 MGP_WSBEiJ_G0014757.1 mouse_genomes_project 17 11688370 11696705 - Gm16046 processed_transcript processed_transcript MGP_WSBEiJ_T0016952.1 MGP_WSBEiJ_G0014757.1 mouse_genomes_project 17 11691865 11696695 - Gm16046 processed_transcript processed_transcript MGP_WSBEiJ_T0016953.1 MGP_WSBEiJ_G0014757.1 mouse_genomes_project 17 11692345 11696724 - Gm16046 processed_transcript processed_transcript MGP_WSBEiJ_T0045974.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33350964 33364860 + MGP_WSBEiJ_P0045974 Ndufa7 protein_coding protein_coding MGP_WSBEiJ_T0045975.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33350967 33352498 + Ndufa7 protein_coding retained_intron MGP_WSBEiJ_T0045976.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33350977 33364853 + MGP_WSBEiJ_P0045976 Ndufa7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045977.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33351018 33352221 + Ndufa7 protein_coding retained_intron MGP_WSBEiJ_T0045978.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33351419 33364726 + Ndufa7 protein_coding processed_transcript MGP_WSBEiJ_T0045979.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33351995 33364730 + Ndufa7 protein_coding processed_transcript MGP_WSBEiJ_T0045980.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33355502 33364853 + Ndufa7 protein_coding processed_transcript MGP_WSBEiJ_T0045981.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33355737 33364838 + Ndufa7 protein_coding processed_transcript MGP_WSBEiJ_T0045982.1 MGP_WSBEiJ_G0022826.1 mouse_genomes_project 17 33355771 33364858 + Ndufa7 protein_coding retained_intron MGP_WSBEiJ_T0044728.1 MGP_WSBEiJ_G0022480.1 mouse_genomes_project 17 13663602 13686295 - MGP_WSBEiJ_P0044728 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044729.1 MGP_WSBEiJ_G0022480.1 mouse_genomes_project 17 13666076 13676996 - protein_coding retained_intron MGP_WSBEiJ_T0044730.1 MGP_WSBEiJ_G0022480.1 mouse_genomes_project 17 13666189 13676528 - protein_coding retained_intron MGP_WSBEiJ_T0044731.1 MGP_WSBEiJ_G0022480.1 mouse_genomes_project 17 13674348 13687332 - MGP_WSBEiJ_P0044731 protein_coding protein_coding MGP_WSBEiJ_T0044732.1 MGP_WSBEiJ_G0022480.1 mouse_genomes_project 17 13681011 13687346 - protein_coding retained_intron MGP_WSBEiJ_T0044733.1 MGP_WSBEiJ_G0022480.1 mouse_genomes_project 17 13685809 13687314 - protein_coding processed_transcript MGP_WSBEiJ_T0003645.1 MGP_WSBEiJ_G0003288.1 mouse_genomes_project 17 11774717 11775680 - Gm16049 antisense antisense MGP_WSBEiJ_T0045646.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28131053 28170620 - MGP_WSBEiJ_P0045646 Stk38 protein_coding protein_coding MGP_WSBEiJ_T0045647.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28131185 28133246 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045648.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28132405 28170620 - MGP_WSBEiJ_P0045648 Stk38 protein_coding protein_coding MGP_WSBEiJ_T0045649.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28133107 28144012 - Stk38 protein_coding retained_intron MGP_WSBEiJ_T0045650.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28133260 28134888 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045651.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28134450 28144301 - Stk38 protein_coding retained_intron MGP_WSBEiJ_T0045652.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28134511 28139648 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045653.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28134511 28140183 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045654.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28134739 28139933 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045655.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28137565 28139918 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045656.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28139938 28170628 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045657.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28145375 28161920 - Stk38 protein_coding retained_intron MGP_WSBEiJ_T0045658.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28149757 28153246 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045659.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28153232 28170418 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0045660.1 MGP_WSBEiJ_G0022742.1 mouse_genomes_project 17 28159428 28170579 - Stk38 protein_coding processed_transcript MGP_WSBEiJ_T0044656.1 MGP_WSBEiJ_G0022458.1 mouse_genomes_project 17 10875178 10899154 - MGP_WSBEiJ_P0044656 Acat2 protein_coding protein_coding MGP_WSBEiJ_T0044657.1 MGP_WSBEiJ_G0022458.1 mouse_genomes_project 17 10877401 10899446 - MGP_WSBEiJ_P0044657 Acat2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047112.1 MGP_WSBEiJ_G0023138.1 mouse_genomes_project 17 49675709 49687793 + MGP_WSBEiJ_P0047112 Treml2 protein_coding protein_coding MGP_WSBEiJ_T0046663.1 MGP_WSBEiJ_G0022973.1 mouse_genomes_project 17 37290204 37306283 - MGP_WSBEiJ_P0046663 Mog protein_coding protein_coding MGP_WSBEiJ_T0046664.1 MGP_WSBEiJ_G0022973.1 mouse_genomes_project 17 37290974 37306084 - MGP_WSBEiJ_P0046664 Mog protein_coding protein_coding MGP_WSBEiJ_T0047725.1 MGP_WSBEiJ_G0023364.1 mouse_genomes_project 17 90194204 90199210 + MGP_WSBEiJ_P0047725 Tmem247 protein_coding protein_coding MGP_WSBEiJ_T0047726.1 MGP_WSBEiJ_G0023364.1 mouse_genomes_project 17 90195253 90199217 + MGP_WSBEiJ_P0047726 Tmem247 protein_coding protein_coding MGP_WSBEiJ_T0045419.1 MGP_WSBEiJ_G0022691.1 mouse_genomes_project 17 25485888 25583904 + MGP_WSBEiJ_P0045419 Ergic1 protein_coding protein_coding MGP_WSBEiJ_T0045420.1 MGP_WSBEiJ_G0022691.1 mouse_genomes_project 17 25485917 25493311 + Ergic1 protein_coding processed_transcript MGP_WSBEiJ_T0045421.1 MGP_WSBEiJ_G0022691.1 mouse_genomes_project 17 25485944 25582147 + Ergic1 protein_coding processed_transcript MGP_WSBEiJ_T0045422.1 MGP_WSBEiJ_G0022691.1 mouse_genomes_project 17 25540528 25561339 + MGP_WSBEiJ_P0045422 Ergic1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045423.1 MGP_WSBEiJ_G0022691.1 mouse_genomes_project 17 25548470 25582147 + Ergic1 protein_coding processed_transcript MGP_WSBEiJ_T0045424.1 MGP_WSBEiJ_G0022691.1 mouse_genomes_project 17 25551197 25570788 + Ergic1 protein_coding retained_intron MGP_WSBEiJ_T0045425.1 MGP_WSBEiJ_G0022691.1 mouse_genomes_project 17 25565653 25582325 + MGP_WSBEiJ_P0045425 Ergic1 protein_coding protein_coding MGP_WSBEiJ_T0044620.1 MGP_WSBEiJ_G0022448.1 mouse_genomes_project 17 10328235 10418837 - MGP_WSBEiJ_P0044620 Slc22a3 protein_coding protein_coding MGP_WSBEiJ_T0012910.1 MGP_WSBEiJ_G0011040.1 mouse_genomes_project 17 11177506 11177700 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003714.1 MGP_WSBEiJ_G0003341.1 mouse_genomes_project 17 90625705 90627992 - Gm15978 antisense antisense MGP_WSBEiJ_T0100662.1 MGP_WSBEiJ_G0039120.1 mouse_genomes_project 17 37597050 37598442 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045808.1 MGP_WSBEiJ_G0022782.1 mouse_genomes_project 17 31211624 31224015 - MGP_WSBEiJ_P0045808 Sik1 protein_coding protein_coding MGP_WSBEiJ_T0047496.1 MGP_WSBEiJ_G0023275.1 mouse_genomes_project 17 73518309 73631403 + MGP_WSBEiJ_P0047496 Myom1 protein_coding protein_coding MGP_WSBEiJ_T0047497.1 MGP_WSBEiJ_G0023275.1 mouse_genomes_project 17 73518356 73631404 + MGP_WSBEiJ_P0047497 Myom1 protein_coding protein_coding MGP_WSBEiJ_T0047498.1 MGP_WSBEiJ_G0023275.1 mouse_genomes_project 17 73518356 73631404 + MGP_WSBEiJ_P0047498 Myom1 protein_coding protein_coding MGP_WSBEiJ_T0046725.1 MGP_WSBEiJ_G0023016.1 mouse_genomes_project 17 38781834 38782773 + MGP_WSBEiJ_P0046725 Olfr136 protein_coding protein_coding MGP_WSBEiJ_T0003653.1 MGP_WSBEiJ_G0003295.1 mouse_genomes_project 17 26084694 26086483 - Itpr3os antisense antisense MGP_WSBEiJ_T0047391.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 67988223 68010047 + MGP_WSBEiJ_P0047391 Ppp4r1 protein_coding protein_coding MGP_WSBEiJ_T0047392.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 67988430 68021157 + MGP_WSBEiJ_P0047392 Ppp4r1 protein_coding protein_coding MGP_WSBEiJ_T0047393.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68006184 68018295 + Ppp4r1 protein_coding processed_transcript MGP_WSBEiJ_T0047394.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68008879 68018268 + Ppp4r1 protein_coding retained_intron MGP_WSBEiJ_T0047395.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68009249 68049470 + MGP_WSBEiJ_P0047395 Ppp4r1 protein_coding protein_coding MGP_WSBEiJ_T0047396.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68009250 68049466 + MGP_WSBEiJ_P0047396 Ppp4r1 protein_coding protein_coding MGP_WSBEiJ_T0047397.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68009294 68049465 + MGP_WSBEiJ_P0047397 Ppp4r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047398.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68009345 68021383 + MGP_WSBEiJ_P0047398 Ppp4r1 protein_coding protein_coding MGP_WSBEiJ_T0047399.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68024691 68038592 + Ppp4r1 protein_coding processed_transcript MGP_WSBEiJ_T0047400.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68027741 68049400 + Ppp4r1 protein_coding processed_transcript MGP_WSBEiJ_T0047401.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68032123 68040701 + MGP_WSBEiJ_P0047401 Ppp4r1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047402.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68036536 68040637 + Ppp4r1 protein_coding retained_intron MGP_WSBEiJ_T0047403.1 MGP_WSBEiJ_G0023251.1 mouse_genomes_project 17 68045433 68046525 + MGP_WSBEiJ_P0047403 Ppp4r1 protein_coding protein_coding MGP_WSBEiJ_T0045602.1 MGP_WSBEiJ_G0022731.1 mouse_genomes_project 17 27683245 27687526 - MGP_WSBEiJ_P0045602 Clps protein_coding protein_coding MGP_WSBEiJ_T0045603.1 MGP_WSBEiJ_G0022731.1 mouse_genomes_project 17 27683248 27687471 - MGP_WSBEiJ_P0045603 Clps protein_coding protein_coding MGP_WSBEiJ_T0046809.1 MGP_WSBEiJ_G0023059.1 mouse_genomes_project 17 46538002 46564408 - MGP_WSBEiJ_P0046809 Spats1 protein_coding protein_coding MGP_WSBEiJ_T0044536.1 MGP_WSBEiJ_G0022419.1 mouse_genomes_project 17 4684182 4685379 + MGP_WSBEiJ_P0044536 protein_coding protein_coding MGP_WSBEiJ_T0044537.1 MGP_WSBEiJ_G0022419.1 mouse_genomes_project 17 4684183 4706611 + MGP_WSBEiJ_P0044537 protein_coding protein_coding MGP_WSBEiJ_T0045137.1 MGP_WSBEiJ_G0022626.1 mouse_genomes_project 17 23867218 23890229 - MGP_WSBEiJ_P0045137 Tmem204 protein_coding protein_coding MGP_WSBEiJ_T0045138.1 MGP_WSBEiJ_G0022626.1 mouse_genomes_project 17 23867420 23887274 - MGP_WSBEiJ_P0045138 Tmem204 protein_coding protein_coding MGP_WSBEiJ_T0045474.1 MGP_WSBEiJ_G0022705.1 mouse_genomes_project 17 26129272 26153641 - MGP_WSBEiJ_P0045474 Ip6k3 protein_coding protein_coding MGP_WSBEiJ_T0006792.1 MGP_WSBEiJ_G0005595.1 mouse_genomes_project 17 4152956 4182579 - Gm2885 lincRNA lincRNA MGP_WSBEiJ_T0096994.1 MGP_WSBEiJ_G0035675.1 mouse_genomes_project 17 65184958 65185069 - Gm25348 rRNA rRNA MGP_WSBEiJ_T0006841.1 MGP_WSBEiJ_G0005635.1 mouse_genomes_project 17 33889275 33902827 - Gm20513 lincRNA lincRNA MGP_WSBEiJ_T0046878.1 MGP_WSBEiJ_G0023074.1 mouse_genomes_project 17 47267244 47282065 - MGP_WSBEiJ_P0046878 Rsph9 protein_coding protein_coding MGP_WSBEiJ_T0046882.1 MGP_WSBEiJ_G0023074.1 mouse_genomes_project 17 47274480 47289451 - MGP_WSBEiJ_P0046882 Rsph9 protein_coding protein_coding MGP_WSBEiJ_T0046883.1 MGP_WSBEiJ_G0023074.1 mouse_genomes_project 17 47279718 47282030 - Rsph9 protein_coding retained_intron MGP_WSBEiJ_T0003694.1 MGP_WSBEiJ_G0003325.1 mouse_genomes_project 17 45804585 45806343 + Runx2os1 antisense antisense MGP_WSBEiJ_T0046787.1 MGP_WSBEiJ_G0023054.1 mouse_genomes_project 17 45130157 45139629 - MGP_WSBEiJ_P0046787 Enpp4 protein_coding protein_coding MGP_WSBEiJ_T0046788.1 MGP_WSBEiJ_G0023054.1 mouse_genomes_project 17 45130165 45139584 - MGP_WSBEiJ_P0046788 Enpp4 protein_coding protein_coding MGP_WSBEiJ_T0000952.1 MGP_WSBEiJ_G0000888.1 mouse_genomes_project 17 29751483 29754050 + TEC TEC MGP_WSBEiJ_T0000953.1 MGP_WSBEiJ_G0000888.1 mouse_genomes_project 17 29752335 29753889 + TEC TEC MGP_WSBEiJ_T0017002.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88779560 88795152 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017003.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88780843 88798158 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017004.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88786302 88798151 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017005.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88786869 88798184 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017006.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88788490 88798126 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017007.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88789432 88798061 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017008.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88790177 88798171 - Six3os1 processed_transcript retained_intron MGP_WSBEiJ_T0017009.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88790560 88798009 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017010.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88790560 88798007 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017011.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88791813 88798061 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017012.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88792625 88797859 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0017013.1 MGP_WSBEiJ_G0014776.1 mouse_genomes_project 17 88792626 88798144 - Six3os1 processed_transcript antisense MGP_WSBEiJ_T0100625.1 MGP_WSBEiJ_G0039083.1 mouse_genomes_project 17 21535234 21551317 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047003.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48629440 48639249 + MGP_WSBEiJ_P0047003 Mrps10 protein_coding protein_coding MGP_WSBEiJ_T0047004.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48629444 48639251 + MGP_WSBEiJ_P0047004 Mrps10 protein_coding protein_coding MGP_WSBEiJ_T0047005.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48629445 48636515 + Mrps10 protein_coding retained_intron MGP_WSBEiJ_T0047006.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48629446 48635636 + MGP_WSBEiJ_P0047006 Mrps10 protein_coding protein_coding MGP_WSBEiJ_T0047007.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48629451 48636559 + Mrps10 protein_coding retained_intron MGP_WSBEiJ_T0047008.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48629750 48639249 + MGP_WSBEiJ_P0047008 Mrps10 protein_coding protein_coding MGP_WSBEiJ_T0047009.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48629750 48639248 + MGP_WSBEiJ_P0047009 Mrps10 protein_coding protein_coding MGP_WSBEiJ_T0047010.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48630661 48638369 + Mrps10 protein_coding retained_intron MGP_WSBEiJ_T0047011.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48632265 48638389 + Mrps10 protein_coding processed_transcript MGP_WSBEiJ_T0047012.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48633024 48633891 + Mrps10 protein_coding retained_intron MGP_WSBEiJ_T0047013.1 MGP_WSBEiJ_G0023113.1 mouse_genomes_project 17 48636040 48641989 + Mrps10 protein_coding retained_intron MGP_WSBEiJ_T0100664.1 MGP_WSBEiJ_G0039122.1 mouse_genomes_project 17 37645187 37646115 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046434.1 MGP_WSBEiJ_G0022925.1 mouse_genomes_project 17 35459219 35474299 + MGP_WSBEiJ_P0046434 Cchcr1 protein_coding protein_coding MGP_WSBEiJ_T0046435.1 MGP_WSBEiJ_G0022925.1 mouse_genomes_project 17 35459235 35462607 + Cchcr1 protein_coding retained_intron MGP_WSBEiJ_T0046436.1 MGP_WSBEiJ_G0022925.1 mouse_genomes_project 17 35459295 35474318 + MGP_WSBEiJ_P0046436 Cchcr1 protein_coding protein_coding MGP_WSBEiJ_T0046437.1 MGP_WSBEiJ_G0022925.1 mouse_genomes_project 17 35459582 35474308 + MGP_WSBEiJ_P0046437 Cchcr1 protein_coding protein_coding MGP_WSBEiJ_T0046438.1 MGP_WSBEiJ_G0022925.1 mouse_genomes_project 17 35462003 35463243 + Cchcr1 protein_coding processed_transcript MGP_WSBEiJ_T0046439.1 MGP_WSBEiJ_G0022925.1 mouse_genomes_project 17 35467907 35468660 + Cchcr1 protein_coding retained_intron MGP_WSBEiJ_T0046440.1 MGP_WSBEiJ_G0022925.1 mouse_genomes_project 17 35472194 35472736 + Cchcr1 protein_coding retained_intron MGP_WSBEiJ_T0047251.1 MGP_WSBEiJ_G0023190.1 mouse_genomes_project 17 58014210 58020734 + MGP_WSBEiJ_P0047251 protein_coding protein_coding MGP_WSBEiJ_T0011223.1 MGP_WSBEiJ_G0009380.1 mouse_genomes_project 17 32448815 32449090 - Gm25667 misc_RNA misc_RNA MGP_WSBEiJ_T0046701.1 MGP_WSBEiJ_G0022998.1 mouse_genomes_project 17 38061403 38063070 - MGP_WSBEiJ_P0046701 protein_coding protein_coding MGP_WSBEiJ_T0047552.1 MGP_WSBEiJ_G0023293.1 mouse_genomes_project 17 76547987 76615970 - MGP_WSBEiJ_P0047552 Xdh protein_coding protein_coding MGP_WSBEiJ_T0046703.1 MGP_WSBEiJ_G0023000.1 mouse_genomes_project 17 38163821 38165944 + MGP_WSBEiJ_P0046703 protein_coding protein_coding MGP_WSBEiJ_T0046621.1 MGP_WSBEiJ_G0022962.1 mouse_genomes_project 17 37126780 37134213 - MGP_WSBEiJ_P0046621 Trim15 protein_coding protein_coding MGP_WSBEiJ_T0046622.1 MGP_WSBEiJ_G0022962.1 mouse_genomes_project 17 37126782 37134236 - MGP_WSBEiJ_P0046622 Trim15 protein_coding protein_coding MGP_WSBEiJ_T0046623.1 MGP_WSBEiJ_G0022962.1 mouse_genomes_project 17 37127403 37133772 - MGP_WSBEiJ_P0046623 Trim15 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047038.1 MGP_WSBEiJ_G0023120.1 mouse_genomes_project 17 48897716 48909456 - MGP_WSBEiJ_P0047038 Bysl protein_coding protein_coding MGP_WSBEiJ_T0045902.1 MGP_WSBEiJ_G0022811.1 mouse_genomes_project 17 32762760 32776702 - MGP_WSBEiJ_P0045902 Zfp955b protein_coding protein_coding MGP_WSBEiJ_T0046246.1 MGP_WSBEiJ_G0022881.1 mouse_genomes_project 17 34624111 34650300 - MGP_WSBEiJ_P0046246 protein_coding protein_coding MGP_WSBEiJ_T0046247.1 MGP_WSBEiJ_G0022881.1 mouse_genomes_project 17 34624125 34641032 - MGP_WSBEiJ_P0046247 protein_coding protein_coding MGP_WSBEiJ_T0099253.1 MGP_WSBEiJ_G0037916.1 mouse_genomes_project 17 74193976 74194052 + Gm22858 snoRNA snoRNA MGP_WSBEiJ_T0045527.1 MGP_WSBEiJ_G0022719.1 mouse_genomes_project 17 27130744 27145924 - MGP_WSBEiJ_P0045527 Tcp11 protein_coding protein_coding MGP_WSBEiJ_T0045528.1 MGP_WSBEiJ_G0022719.1 mouse_genomes_project 17 27130745 27145979 - MGP_WSBEiJ_P0045528 Tcp11 protein_coding protein_coding MGP_WSBEiJ_T0045529.1 MGP_WSBEiJ_G0022719.1 mouse_genomes_project 17 27130748 27145907 - MGP_WSBEiJ_P0045529 Tcp11 protein_coding protein_coding MGP_WSBEiJ_T0045530.1 MGP_WSBEiJ_G0022719.1 mouse_genomes_project 17 27130794 27132474 - Tcp11 protein_coding processed_transcript MGP_WSBEiJ_T0045531.1 MGP_WSBEiJ_G0022719.1 mouse_genomes_project 17 27133664 27145979 - MGP_WSBEiJ_P0045531 Tcp11 protein_coding protein_coding MGP_WSBEiJ_T0045532.1 MGP_WSBEiJ_G0022719.1 mouse_genomes_project 17 27138709 27145941 - MGP_WSBEiJ_P0045532 Tcp11 protein_coding protein_coding MGP_WSBEiJ_T0003685.1 MGP_WSBEiJ_G0003319.1 mouse_genomes_project 17 35980420 36022776 + A930015D03Rik antisense antisense MGP_WSBEiJ_T0045184.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24084806 24097427 - MGP_WSBEiJ_P0045184 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045185.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24084811 24096470 - MGP_WSBEiJ_P0045185 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045186.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24085238 24097427 - MGP_WSBEiJ_P0045186 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045187.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24085238 24097001 - MGP_WSBEiJ_P0045187 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045188.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24085238 24096621 - MGP_WSBEiJ_P0045188 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045189.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24085238 24088939 - MGP_WSBEiJ_P0045189 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045190.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24085283 24097772 - MGP_WSBEiJ_P0045190 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045191.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24087467 24088406 - Ube2i protein_coding retained_intron MGP_WSBEiJ_T0045192.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24088198 24096677 - MGP_WSBEiJ_P0045192 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045193.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24089633 24096954 - MGP_WSBEiJ_P0045193 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045194.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24091475 24097419 - MGP_WSBEiJ_P0045194 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045195.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24092320 24096687 - MGP_WSBEiJ_P0045195 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045196.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24092469 24096242 - MGP_WSBEiJ_P0045196 Ube2i protein_coding protein_coding MGP_WSBEiJ_T0045197.1 MGP_WSBEiJ_G0022637.1 mouse_genomes_project 17 24095749 24096346 - Ube2i protein_coding processed_transcript MGP_WSBEiJ_T0045268.1 MGP_WSBEiJ_G0022659.1 mouse_genomes_project 17 24657852 24669981 + MGP_WSBEiJ_P0045268 Fbxl16 protein_coding protein_coding MGP_WSBEiJ_T0044772.1 MGP_WSBEiJ_G0022498.1 mouse_genomes_project 17 16356973 18013933 + MGP_WSBEiJ_P0044772 protein_coding protein_coding MGP_WSBEiJ_T0100645.1 MGP_WSBEiJ_G0039103.1 mouse_genomes_project 17 36183160 36206435 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045936.1 MGP_WSBEiJ_G0022820.1 mouse_genomes_project 17 33160759 33201190 - MGP_WSBEiJ_P0045936 Hnrnpm protein_coding protein_coding MGP_WSBEiJ_T0045937.1 MGP_WSBEiJ_G0022820.1 mouse_genomes_project 17 33160761 33199721 - MGP_WSBEiJ_P0045937 Hnrnpm protein_coding protein_coding MGP_WSBEiJ_T0045938.1 MGP_WSBEiJ_G0022820.1 mouse_genomes_project 17 33160762 33199717 - MGP_WSBEiJ_P0045938 Hnrnpm protein_coding protein_coding MGP_WSBEiJ_T0045939.1 MGP_WSBEiJ_G0022820.1 mouse_genomes_project 17 33160765 33199717 - MGP_WSBEiJ_P0045939 Hnrnpm protein_coding protein_coding MGP_WSBEiJ_T0045940.1 MGP_WSBEiJ_G0022820.1 mouse_genomes_project 17 33160765 33174765 - MGP_WSBEiJ_P0045940 Hnrnpm protein_coding protein_coding MGP_WSBEiJ_T0045941.1 MGP_WSBEiJ_G0022820.1 mouse_genomes_project 17 33164784 33180879 - MGP_WSBEiJ_P0045941 Hnrnpm protein_coding protein_coding MGP_WSBEiJ_T0045942.1 MGP_WSBEiJ_G0022820.1 mouse_genomes_project 17 33182944 33199714 - Hnrnpm protein_coding retained_intron MGP_WSBEiJ_T0045943.1 MGP_WSBEiJ_G0022820.1 mouse_genomes_project 17 33191262 33199730 - Hnrnpm protein_coding retained_intron MGP_WSBEiJ_T0044777.1 MGP_WSBEiJ_G0022503.1 mouse_genomes_project 17 17983501 18013968 + MGP_WSBEiJ_P0044777 Vmn2r101 protein_coding protein_coding MGP_WSBEiJ_T0047320.1 MGP_WSBEiJ_G0023217.1 mouse_genomes_project 17 58819058 58821031 + MGP_WSBEiJ_P0047320 Alkbh7 protein_coding protein_coding MGP_WSBEiJ_T0047321.1 MGP_WSBEiJ_G0023217.1 mouse_genomes_project 17 58819062 58821042 + MGP_WSBEiJ_P0047321 Alkbh7 protein_coding protein_coding MGP_WSBEiJ_T0047322.1 MGP_WSBEiJ_G0023217.1 mouse_genomes_project 17 58820199 58820857 + Alkbh7 protein_coding retained_intron MGP_WSBEiJ_T0006888.1 MGP_WSBEiJ_G0005670.1 mouse_genomes_project 17 90565736 90572234 - 4833418N02Rik lincRNA lincRNA MGP_WSBEiJ_T0006889.1 MGP_WSBEiJ_G0005670.1 mouse_genomes_project 17 90565771 90573355 - 4833418N02Rik lincRNA lincRNA MGP_WSBEiJ_T0006890.1 MGP_WSBEiJ_G0005670.1 mouse_genomes_project 17 90566098 90573041 - 4833418N02Rik lincRNA lincRNA MGP_WSBEiJ_T0006891.1 MGP_WSBEiJ_G0005670.1 mouse_genomes_project 17 90570787 90573320 - 4833418N02Rik lincRNA lincRNA MGP_WSBEiJ_T0045568.1 MGP_WSBEiJ_G0022725.1 mouse_genomes_project 17 27425635 27429352 + MGP_WSBEiJ_P0045568 protein_coding protein_coding MGP_WSBEiJ_T0045569.1 MGP_WSBEiJ_G0022725.1 mouse_genomes_project 17 27425747 27426803 + protein_coding retained_intron MGP_WSBEiJ_T0045570.1 MGP_WSBEiJ_G0022725.1 mouse_genomes_project 17 27425748 27429352 + MGP_WSBEiJ_P0045570 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045571.1 MGP_WSBEiJ_G0022725.1 mouse_genomes_project 17 27425774 27426560 + protein_coding retained_intron MGP_WSBEiJ_T0045572.1 MGP_WSBEiJ_G0022725.1 mouse_genomes_project 17 27425811 27426687 + protein_coding retained_intron MGP_WSBEiJ_T0045573.1 MGP_WSBEiJ_G0022725.1 mouse_genomes_project 17 27425975 27427692 + protein_coding retained_intron MGP_WSBEiJ_T0045574.1 MGP_WSBEiJ_G0022725.1 mouse_genomes_project 17 27426442 27429347 + protein_coding retained_intron MGP_WSBEiJ_T0098011.1 MGP_WSBEiJ_G0036674.1 mouse_genomes_project 17 75606013 75606120 + Gm23649 snRNA snRNA MGP_WSBEiJ_T0011218.1 MGP_WSBEiJ_G0009375.1 mouse_genomes_project 17 10680776 10681028 + Gm23833 misc_RNA misc_RNA MGP_WSBEiJ_T0045059.1 MGP_WSBEiJ_G0022607.1 mouse_genomes_project 17 23516015 23518233 - MGP_WSBEiJ_P0045059 Rnf151 protein_coding protein_coding MGP_WSBEiJ_T0046984.1 MGP_WSBEiJ_G0023102.1 mouse_genomes_project 17 47916601 47917741 - Gnmt protein_coding retained_intron MGP_WSBEiJ_T0046985.1 MGP_WSBEiJ_G0023102.1 mouse_genomes_project 17 47916601 47921915 - MGP_WSBEiJ_P0046985 Gnmt protein_coding protein_coding MGP_WSBEiJ_T0046273.1 MGP_WSBEiJ_G0022885.1 mouse_genomes_project 17 34690795 34706756 + Slc44a4 protein_coding retained_intron MGP_WSBEiJ_T0046274.1 MGP_WSBEiJ_G0022885.1 mouse_genomes_project 17 34690799 34706733 + MGP_WSBEiJ_P0046274 Slc44a4 protein_coding protein_coding MGP_WSBEiJ_T0046275.1 MGP_WSBEiJ_G0022885.1 mouse_genomes_project 17 34694050 34706814 + MGP_WSBEiJ_P0046275 Slc44a4 protein_coding protein_coding MGP_WSBEiJ_T0098003.1 MGP_WSBEiJ_G0036666.1 mouse_genomes_project 17 50743807 50743968 + Gm22978 snRNA snRNA MGP_WSBEiJ_T0046450.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35619972 35631468 - MGP_WSBEiJ_P0046450 Vars2 protein_coding protein_coding MGP_WSBEiJ_T0046451.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35619993 35630127 - Vars2 protein_coding retained_intron MGP_WSBEiJ_T0046452.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35620725 35627325 - MGP_WSBEiJ_P0046452 Vars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046453.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35620892 35626867 - MGP_WSBEiJ_P0046453 Vars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046454.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35620962 35622751 - Vars2 protein_coding retained_intron MGP_WSBEiJ_T0046455.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35621078 35621853 - Vars2 protein_coding retained_intron MGP_WSBEiJ_T0046456.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35623890 35624385 - Vars2 protein_coding retained_intron MGP_WSBEiJ_T0046457.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35624022 35626304 - MGP_WSBEiJ_P0046457 Vars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046458.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35624363 35625983 - Vars2 protein_coding retained_intron MGP_WSBEiJ_T0046459.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35628285 35630613 - Vars2 protein_coding retained_intron MGP_WSBEiJ_T0046460.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35629981 35631416 - Vars2 protein_coding retained_intron MGP_WSBEiJ_T0046461.1 MGP_WSBEiJ_G0022932.1 mouse_genomes_project 17 35630065 35631425 - MGP_WSBEiJ_P0046461 Vars2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044474.1 MGP_WSBEiJ_G0022404.1 mouse_genomes_project 17 2085387 2194103 + Arid1b protein_coding processed_transcript MGP_WSBEiJ_T0044475.1 MGP_WSBEiJ_G0022404.1 mouse_genomes_project 17 2086687 2452773 + MGP_WSBEiJ_P0044475 Arid1b protein_coding protein_coding MGP_WSBEiJ_T0044476.1 MGP_WSBEiJ_G0022404.1 mouse_genomes_project 17 2086767 2455138 + MGP_WSBEiJ_P0044476 Arid1b protein_coding protein_coding MGP_WSBEiJ_T0044477.1 MGP_WSBEiJ_G0022404.1 mouse_genomes_project 17 2088107 2194556 + Arid1b protein_coding retained_intron MGP_WSBEiJ_T0044478.1 MGP_WSBEiJ_G0022404.1 mouse_genomes_project 17 2135245 2226359 + Arid1b protein_coding retained_intron MGP_WSBEiJ_T0003667.1 MGP_WSBEiJ_G0003305.1 mouse_genomes_project 17 32288702 32305756 + Gm26693 antisense antisense MGP_WSBEiJ_T0044522.1 MGP_WSBEiJ_G0022416.1 mouse_genomes_project 17 3809562 3990799 - MGP_WSBEiJ_P0044522 Dynlt1b protein_coding protein_coding MGP_WSBEiJ_T0047451.1 MGP_WSBEiJ_G0023266.1 mouse_genomes_project 17 71216003 71223640 + MGP_WSBEiJ_P0047451 Tmem200c protein_coding protein_coding MGP_WSBEiJ_T0045739.1 MGP_WSBEiJ_G0022762.1 mouse_genomes_project 17 29477386 29849426 - MGP_WSBEiJ_P0045739 Btbd9 protein_coding protein_coding MGP_WSBEiJ_T0045740.1 MGP_WSBEiJ_G0022762.1 mouse_genomes_project 17 29477386 29849426 - MGP_WSBEiJ_P0045740 Btbd9 protein_coding protein_coding MGP_WSBEiJ_T0006812.1 MGP_WSBEiJ_G0005612.1 mouse_genomes_project 17 24643558 24824431 + lincRNA lincRNA MGP_WSBEiJ_T0044812.1 MGP_WSBEiJ_G0022529.1 mouse_genomes_project 17 19974697 20006405 + MGP_WSBEiJ_P0044812 Zfp53 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046994.1 MGP_WSBEiJ_G0023107.1 mouse_genomes_project 17 48003287 48046700 - MGP_WSBEiJ_P0046994 Gltscr1l protein_coding protein_coding MGP_WSBEiJ_T0017014.1 MGP_WSBEiJ_G0014777.1 mouse_genomes_project 17 94349929 94355909 + 4930480K15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0047315.1 MGP_WSBEiJ_G0023213.1 mouse_genomes_project 17 58686395 58703076 + MGP_WSBEiJ_P0047315 1700061G19Rik protein_coding protein_coding MGP_WSBEiJ_T0047316.1 MGP_WSBEiJ_G0023213.1 mouse_genomes_project 17 58686421 58688737 + 1700061G19Rik protein_coding retained_intron MGP_WSBEiJ_T0044848.1 MGP_WSBEiJ_G0022548.1 mouse_genomes_project 17 21561478 21566810 + MGP_WSBEiJ_P0044848 protein_coding protein_coding MGP_WSBEiJ_T0045911.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33046587 33077728 + MGP_WSBEiJ_P0045911 Adamts10 protein_coding protein_coding MGP_WSBEiJ_T0045912.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33046587 33077728 + MGP_WSBEiJ_P0045912 Adamts10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045913.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33046592 33077727 + MGP_WSBEiJ_P0045913 Adamts10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045914.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33046593 33051533 + Adamts10 protein_coding retained_intron MGP_WSBEiJ_T0045915.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33046609 33077728 + MGP_WSBEiJ_P0045915 Adamts10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045916.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33050682 33077408 + MGP_WSBEiJ_P0045916 Adamts10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045917.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33050682 33077408 + MGP_WSBEiJ_P0045917 Adamts10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045918.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33055733 33077727 + MGP_WSBEiJ_P0045918 Adamts10 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045919.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33055842 33067280 + Adamts10 protein_coding processed_transcript MGP_WSBEiJ_T0045920.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33061459 33077728 + Adamts10 protein_coding retained_intron MGP_WSBEiJ_T0045921.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33061842 33077730 + Adamts10 protein_coding retained_intron MGP_WSBEiJ_T0045922.1 MGP_WSBEiJ_G0022816.1 mouse_genomes_project 17 33067580 33077742 + Adamts10 protein_coding retained_intron MGP_WSBEiJ_T0047241.1 MGP_WSBEiJ_G0023184.1 mouse_genomes_project 17 57863223 57869218 - MGP_WSBEiJ_P0047241 Plin5 protein_coding protein_coding MGP_WSBEiJ_T0047242.1 MGP_WSBEiJ_G0023184.1 mouse_genomes_project 17 57863229 57868920 - MGP_WSBEiJ_P0047242 Plin5 protein_coding protein_coding MGP_WSBEiJ_T0012939.1 MGP_WSBEiJ_G0011069.1 mouse_genomes_project 17 38255753 38258372 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045369.1 MGP_WSBEiJ_G0022681.1 mouse_genomes_project 17 25010304 25069908 + MGP_WSBEiJ_P0045369 Axin1 protein_coding protein_coding MGP_WSBEiJ_T0045370.1 MGP_WSBEiJ_G0022681.1 mouse_genomes_project 17 25010444 25069338 + MGP_WSBEiJ_P0045370 Axin1 protein_coding protein_coding MGP_WSBEiJ_T0045371.1 MGP_WSBEiJ_G0022681.1 mouse_genomes_project 17 25010566 25069391 + MGP_WSBEiJ_P0045371 Axin1 protein_coding protein_coding MGP_WSBEiJ_T0045372.1 MGP_WSBEiJ_G0022681.1 mouse_genomes_project 17 25014968 25057249 + MGP_WSBEiJ_P0045372 Axin1 protein_coding protein_coding MGP_WSBEiJ_T0045373.1 MGP_WSBEiJ_G0022681.1 mouse_genomes_project 17 25061074 25061717 + Axin1 protein_coding retained_intron MGP_WSBEiJ_T0045612.1 MGP_WSBEiJ_G0022734.1 mouse_genomes_project 17 27769097 27827232 - MGP_WSBEiJ_P0045612 Slc26a8 protein_coding protein_coding MGP_WSBEiJ_T0045613.1 MGP_WSBEiJ_G0022734.1 mouse_genomes_project 17 27780939 27827232 - Slc26a8 protein_coding retained_intron MGP_WSBEiJ_T0047106.1 MGP_WSBEiJ_G0023137.1 mouse_genomes_project 17 49641216 49652277 + MGP_WSBEiJ_P0047106 Treml4 protein_coding protein_coding MGP_WSBEiJ_T0047107.1 MGP_WSBEiJ_G0023137.1 mouse_genomes_project 17 49641258 49651410 + MGP_WSBEiJ_P0047107 Treml4 protein_coding protein_coding MGP_WSBEiJ_T0047108.1 MGP_WSBEiJ_G0023137.1 mouse_genomes_project 17 49641258 49651410 + MGP_WSBEiJ_P0047108 Treml4 protein_coding protein_coding MGP_WSBEiJ_T0047109.1 MGP_WSBEiJ_G0023137.1 mouse_genomes_project 17 49641262 49651583 + MGP_WSBEiJ_P0047109 Treml4 protein_coding protein_coding MGP_WSBEiJ_T0047110.1 MGP_WSBEiJ_G0023137.1 mouse_genomes_project 17 49641294 49651417 + MGP_WSBEiJ_P0047110 Treml4 protein_coding protein_coding MGP_WSBEiJ_T0047111.1 MGP_WSBEiJ_G0023137.1 mouse_genomes_project 17 49649355 49651429 + Treml4 protein_coding retained_intron MGP_WSBEiJ_T0046442.1 MGP_WSBEiJ_G0022927.1 mouse_genomes_project 17 35498286 35505023 + MGP_WSBEiJ_P0046442 Cdsn protein_coding protein_coding MGP_WSBEiJ_T0046034.1 MGP_WSBEiJ_G0022839.1 mouse_genomes_project 17 33587095 33590875 - H2-Ke6 protein_coding retained_intron MGP_WSBEiJ_T0046035.1 MGP_WSBEiJ_G0022839.1 mouse_genomes_project 17 33587095 33587822 - H2-Ke6 protein_coding retained_intron MGP_WSBEiJ_T0046036.1 MGP_WSBEiJ_G0022839.1 mouse_genomes_project 17 33587095 33591833 - MGP_WSBEiJ_P0046036 H2-Ke6 protein_coding protein_coding MGP_WSBEiJ_T0046037.1 MGP_WSBEiJ_G0022839.1 mouse_genomes_project 17 33587098 33591823 - H2-Ke6 protein_coding retained_intron MGP_WSBEiJ_T0046038.1 MGP_WSBEiJ_G0022839.1 mouse_genomes_project 17 33587219 33590729 - H2-Ke6 protein_coding retained_intron MGP_WSBEiJ_T0046039.1 MGP_WSBEiJ_G0022839.1 mouse_genomes_project 17 33587470 33591640 - H2-Ke6 protein_coding processed_transcript MGP_WSBEiJ_T0046040.1 MGP_WSBEiJ_G0022839.1 mouse_genomes_project 17 33587732 33591837 - MGP_WSBEiJ_P0046040 H2-Ke6 protein_coding protein_coding MGP_WSBEiJ_T0046041.1 MGP_WSBEiJ_G0022839.1 mouse_genomes_project 17 33590690 33591815 - H2-Ke6 protein_coding retained_intron MGP_WSBEiJ_T0045320.1 MGP_WSBEiJ_G0022669.1 mouse_genomes_project 17 24729921 24732567 - MGP_WSBEiJ_P0045320 Wfikkn1 protein_coding protein_coding MGP_WSBEiJ_T0045321.1 MGP_WSBEiJ_G0022669.1 mouse_genomes_project 17 24731065 24732498 - MGP_WSBEiJ_P0045321 Wfikkn1 protein_coding protein_coding MGP_WSBEiJ_T0047210.1 MGP_WSBEiJ_G0023169.1 mouse_genomes_project 17 57487386 57581383 + MGP_WSBEiJ_P0047210 Adgre4 protein_coding protein_coding MGP_WSBEiJ_T0045750.1 MGP_WSBEiJ_G0022769.1 mouse_genomes_project 17 30449256 30452319 - MGP_WSBEiJ_P0045750 Tff2 protein_coding protein_coding MGP_WSBEiJ_T0010022.1 MGP_WSBEiJ_G0008179.1 mouse_genomes_project 17 24680056 24680120 - Mir3082 miRNA miRNA MGP_WSBEiJ_T0100638.1 MGP_WSBEiJ_G0039096.1 mouse_genomes_project 17 34239902 34249226 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047308.1 MGP_WSBEiJ_G0023208.1 mouse_genomes_project 17 58554127 58564785 - MGP_WSBEiJ_P0047308 Nrtn protein_coding protein_coding MGP_WSBEiJ_T0099249.1 MGP_WSBEiJ_G0037912.1 mouse_genomes_project 17 65277183 65277300 + Gm24730 snoRNA snoRNA MGP_WSBEiJ_T0045958.1 MGP_WSBEiJ_G0022823.1 mouse_genomes_project 17 33295841 33303656 - MGP_WSBEiJ_P0045958 Angptl4 protein_coding protein_coding MGP_WSBEiJ_T0045959.1 MGP_WSBEiJ_G0022823.1 mouse_genomes_project 17 33296998 33303624 - MGP_WSBEiJ_P0045959 Angptl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045960.1 MGP_WSBEiJ_G0022823.1 mouse_genomes_project 17 33299051 33300547 - Angptl4 protein_coding retained_intron MGP_WSBEiJ_T0045961.1 MGP_WSBEiJ_G0022823.1 mouse_genomes_project 17 33299092 33301225 - Angptl4 protein_coding processed_transcript MGP_WSBEiJ_T0047064.1 MGP_WSBEiJ_G0023128.1 mouse_genomes_project 17 49038124 49048335 + MGP_WSBEiJ_P0047064 Pgc protein_coding protein_coding MGP_WSBEiJ_T0047065.1 MGP_WSBEiJ_G0023128.1 mouse_genomes_project 17 49038126 49045044 + MGP_WSBEiJ_P0047065 Pgc protein_coding protein_coding MGP_WSBEiJ_T0047678.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86772697 86883497 + MGP_WSBEiJ_P0047678 Mta3 protein_coding protein_coding MGP_WSBEiJ_T0047679.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86772697 86869669 + MGP_WSBEiJ_P0047679 Mta3 protein_coding protein_coding MGP_WSBEiJ_T0047680.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86772697 86869671 + MGP_WSBEiJ_P0047680 Mta3 protein_coding protein_coding MGP_WSBEiJ_T0047681.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86772716 86899610 + MGP_WSBEiJ_P0047681 Mta3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047682.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86772719 86892996 + MGP_WSBEiJ_P0047682 Mta3 protein_coding protein_coding MGP_WSBEiJ_T0047683.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86772786 86901686 + MGP_WSBEiJ_P0047683 Mta3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047684.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86796204 86827807 + Mta3 protein_coding processed_transcript MGP_WSBEiJ_T0047685.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86829576 86878318 + MGP_WSBEiJ_P0047685 Mta3 protein_coding protein_coding MGP_WSBEiJ_T0047686.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86861137 86898310 + MGP_WSBEiJ_P0047686 Mta3 protein_coding protein_coding MGP_WSBEiJ_T0047687.1 MGP_WSBEiJ_G0023346.1 mouse_genomes_project 17 86872219 86882671 + Mta3 protein_coding processed_transcript MGP_WSBEiJ_T0099242.1 MGP_WSBEiJ_G0037905.1 mouse_genomes_project 17 35052240 35052317 + Gm22589 snoRNA snoRNA MGP_WSBEiJ_T0045446.1 MGP_WSBEiJ_G0022698.1 mouse_genomes_project 17 25897395 25898890 - MGP_WSBEiJ_P0045446 Cuta protein_coding protein_coding MGP_WSBEiJ_T0045447.1 MGP_WSBEiJ_G0022698.1 mouse_genomes_project 17 25897395 25898900 - MGP_WSBEiJ_P0045447 Cuta protein_coding protein_coding MGP_WSBEiJ_T0046399.1 MGP_WSBEiJ_G0022913.1 mouse_genomes_project 17 34987140 34990311 - MGP_WSBEiJ_P0046399 Lst1 protein_coding protein_coding MGP_WSBEiJ_T0047389.1 MGP_WSBEiJ_G0023249.1 mouse_genomes_project 17 67828689 67833304 - MGP_WSBEiJ_P0047389 Txndc2 protein_coding protein_coding MGP_WSBEiJ_T0012948.1 MGP_WSBEiJ_G0011078.1 mouse_genomes_project 17 42251360 42252361 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0096991.1 MGP_WSBEiJ_G0035672.1 mouse_genomes_project 17 45702809 45702928 - n-R5s27 rRNA rRNA MGP_WSBEiJ_T0016956.1 MGP_WSBEiJ_G0014760.1 mouse_genomes_project 17 22962293 22975712 + BC028777 processed_transcript processed_transcript MGP_WSBEiJ_T0016957.1 MGP_WSBEiJ_G0014760.1 mouse_genomes_project 17 22965938 22975897 + BC028777 processed_transcript processed_transcript MGP_WSBEiJ_T0044869.1 MGP_WSBEiJ_G0022554.1 mouse_genomes_project 17 22350162 22358197 + MGP_WSBEiJ_P0044869 Ccdc64b protein_coding protein_coding MGP_WSBEiJ_T0047457.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72383668 73292058 + MGP_WSBEiJ_P0047457 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0047458.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72383841 73290369 + MGP_WSBEiJ_P0047458 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0047459.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72383963 72941601 + Dlgap1 protein_coding retained_intron MGP_WSBEiJ_T0047460.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72383963 72497909 + Dlgap1 protein_coding retained_intron MGP_WSBEiJ_T0047461.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72383968 73097421 + Dlgap1 protein_coding retained_intron MGP_WSBEiJ_T0047462.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72383997 73286440 + MGP_WSBEiJ_P0047462 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0047463.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72384016 73021752 + Dlgap1 protein_coding retained_intron MGP_WSBEiJ_T0047464.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72838037 73290448 + MGP_WSBEiJ_P0047464 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0047465.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72938824 73288878 + MGP_WSBEiJ_P0047465 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0047466.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72944657 73023089 + Dlgap1 protein_coding retained_intron MGP_WSBEiJ_T0047467.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72944716 73251202 + Dlgap1 protein_coding retained_intron MGP_WSBEiJ_T0047468.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72944716 73292054 + MGP_WSBEiJ_P0047468 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0047469.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72944725 73289189 + MGP_WSBEiJ_P0047469 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0047470.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72944742 73288946 + MGP_WSBEiJ_P0047470 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0047471.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72988542 73169119 + Dlgap1 protein_coding retained_intron MGP_WSBEiJ_T0047472.1 MGP_WSBEiJ_G0023270.1 mouse_genomes_project 17 72988777 73286737 + MGP_WSBEiJ_P0047472 Dlgap1 protein_coding protein_coding MGP_WSBEiJ_T0045904.1 MGP_WSBEiJ_G0022813.1 mouse_genomes_project 17 32849548 32877333 - MGP_WSBEiJ_P0045904 Zfp81 protein_coding protein_coding MGP_WSBEiJ_T0046733.1 MGP_WSBEiJ_G0023023.1 mouse_genomes_project 17 39850009 39851076 + MGP_WSBEiJ_P0046733 Esp38 protein_coding protein_coding MGP_WSBEiJ_T0044554.1 MGP_WSBEiJ_G0022430.1 mouse_genomes_project 17 5649509 5672939 - MGP_WSBEiJ_P0044554 protein_coding protein_coding MGP_WSBEiJ_T0046586.1 MGP_WSBEiJ_G0022951.1 mouse_genomes_project 17 36021468 36027054 - H2-T22 protein_coding retained_intron MGP_WSBEiJ_T0046587.1 MGP_WSBEiJ_G0022951.1 mouse_genomes_project 17 36023091 36027352 - MGP_WSBEiJ_P0046587 H2-T22 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045128.1 MGP_WSBEiJ_G0022623.1 mouse_genomes_project 17 23752514 23771636 - MGP_WSBEiJ_P0045128 Hn1l protein_coding protein_coding MGP_WSBEiJ_T0046918.1 MGP_WSBEiJ_G0023081.1 mouse_genomes_project 17 47402286 47405424 + MGP_WSBEiJ_P0046918 Lrrc73 protein_coding protein_coding MGP_WSBEiJ_T0046753.1 MGP_WSBEiJ_G0023039.1 mouse_genomes_project 17 43471378 43529862 - MGP_WSBEiJ_P0046753 Opn5 protein_coding protein_coding MGP_WSBEiJ_T0045174.1 MGP_WSBEiJ_G0022635.1 mouse_genomes_project 17 24062782 24065404 + MGP_WSBEiJ_P0045174 Tsr3 protein_coding protein_coding MGP_WSBEiJ_T0045762.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714317 30811498 + MGP_WSBEiJ_P0045762 Pde9a protein_coding protein_coding MGP_WSBEiJ_T0045763.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714332 30811344 + MGP_WSBEiJ_P0045763 Pde9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045764.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714332 30811344 + MGP_WSBEiJ_P0045764 Pde9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045765.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714332 30811344 + MGP_WSBEiJ_P0045765 Pde9a protein_coding protein_coding MGP_WSBEiJ_T0045766.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714337 30811347 + MGP_WSBEiJ_P0045766 Pde9a protein_coding protein_coding MGP_WSBEiJ_T0045767.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714345 30811269 + MGP_WSBEiJ_P0045767 Pde9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045768.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714357 30811347 + MGP_WSBEiJ_P0045768 Pde9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045769.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714359 30807026 + Pde9a protein_coding retained_intron MGP_WSBEiJ_T0045770.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30714377 30790353 + MGP_WSBEiJ_P0045770 Pde9a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045771.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30763646 30794361 + MGP_WSBEiJ_P0045771 Pde9a protein_coding protein_coding MGP_WSBEiJ_T0045772.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30778128 30795422 + Pde9a protein_coding retained_intron MGP_WSBEiJ_T0045773.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30788566 30796931 + Pde9a protein_coding retained_intron MGP_WSBEiJ_T0045774.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30796858 30811329 + MGP_WSBEiJ_P0045774 Pde9a protein_coding protein_coding MGP_WSBEiJ_T0045775.1 MGP_WSBEiJ_G0022775.1 mouse_genomes_project 17 30806271 30811294 + Pde9a protein_coding processed_transcript MGP_WSBEiJ_T0047612.1 MGP_WSBEiJ_G0023314.1 mouse_genomes_project 17 81716931 81741427 - MGP_WSBEiJ_P0047612 Sult6b1 protein_coding protein_coding MGP_WSBEiJ_T0047613.1 MGP_WSBEiJ_G0023314.1 mouse_genomes_project 17 81717882 81729611 - Sult6b1 protein_coding processed_transcript MGP_WSBEiJ_T0047614.1 MGP_WSBEiJ_G0023314.1 mouse_genomes_project 17 81718051 81741334 - MGP_WSBEiJ_P0047614 Sult6b1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047615.1 MGP_WSBEiJ_G0023314.1 mouse_genomes_project 17 81718051 81741334 - MGP_WSBEiJ_P0047615 Sult6b1 protein_coding protein_coding MGP_WSBEiJ_T0045871.1 MGP_WSBEiJ_G0022799.1 mouse_genomes_project 17 32271809 32288412 - MGP_WSBEiJ_P0045871 Zfp811 protein_coding protein_coding MGP_WSBEiJ_T0045872.1 MGP_WSBEiJ_G0022799.1 mouse_genomes_project 17 32273501 32277032 - MGP_WSBEiJ_P0045872 Zfp811 protein_coding protein_coding MGP_WSBEiJ_T0046765.1 MGP_WSBEiJ_G0023046.1 mouse_genomes_project 17 44472471 44502533 - MGP_WSBEiJ_P0046765 Mep1a protein_coding protein_coding MGP_WSBEiJ_T0046766.1 MGP_WSBEiJ_G0023046.1 mouse_genomes_project 17 44497662 44500255 - Mep1a protein_coding processed_transcript MGP_WSBEiJ_T0046767.1 MGP_WSBEiJ_G0023046.1 mouse_genomes_project 17 44502016 44502509 - Mep1a protein_coding retained_intron MGP_WSBEiJ_T0003663.1 MGP_WSBEiJ_G0003303.1 mouse_genomes_project 17 30461017 30470602 + Gm15318 antisense antisense MGP_WSBEiJ_T0003664.1 MGP_WSBEiJ_G0003303.1 mouse_genomes_project 17 30461017 30471331 + Gm15318 antisense antisense MGP_WSBEiJ_T0003665.1 MGP_WSBEiJ_G0003303.1 mouse_genomes_project 17 30461017 30469767 + Gm15318 antisense antisense MGP_WSBEiJ_T0044972.1 MGP_WSBEiJ_G0022584.1 mouse_genomes_project 17 22977394 23006681 - MGP_WSBEiJ_P0044972 Ccnf protein_coding protein_coding MGP_WSBEiJ_T0045221.1 MGP_WSBEiJ_G0022646.1 mouse_genomes_project 17 24324966 24332377 - MGP_WSBEiJ_P0045221 Sstr5 protein_coding protein_coding MGP_WSBEiJ_T0045222.1 MGP_WSBEiJ_G0022646.1 mouse_genomes_project 17 24324966 24332377 - MGP_WSBEiJ_P0045222 Sstr5 protein_coding protein_coding MGP_WSBEiJ_T0046758.1 MGP_WSBEiJ_G0023041.1 mouse_genomes_project 17 43623611 43653649 - MGP_WSBEiJ_P0046758 Adgrf2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046759.1 MGP_WSBEiJ_G0023041.1 mouse_genomes_project 17 43642033 43680007 - MGP_WSBEiJ_P0046759 Adgrf2 protein_coding protein_coding MGP_WSBEiJ_T0044803.1 MGP_WSBEiJ_G0022523.1 mouse_genomes_project 17 19747643 19750082 + MGP_WSBEiJ_P0044803 Vmn1r235 protein_coding protein_coding MGP_WSBEiJ_T0045082.1 MGP_WSBEiJ_G0022616.1 mouse_genomes_project 17 23686599 23689839 + MGP_WSBEiJ_P0045082 Igfals protein_coding protein_coding MGP_WSBEiJ_T0047711.1 MGP_WSBEiJ_G0023357.1 mouse_genomes_project 17 88252098 88631869 + MGP_WSBEiJ_P0047711 Camkmt protein_coding protein_coding MGP_WSBEiJ_T0011235.1 MGP_WSBEiJ_G0009392.1 mouse_genomes_project 17 83109789 83110036 - Gm25706 misc_RNA misc_RNA MGP_WSBEiJ_T0010008.1 MGP_WSBEiJ_G0008165.1 mouse_genomes_project 17 10779190 10779306 - Gm24085 miRNA miRNA MGP_WSBEiJ_T0100633.1 MGP_WSBEiJ_G0039091.1 mouse_genomes_project 17 33946738 33948434 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047524.1 MGP_WSBEiJ_G0023280.1 mouse_genomes_project 17 74014703 74068950 - MGP_WSBEiJ_P0047524 Ndc80 protein_coding protein_coding MGP_WSBEiJ_T0012919.1 MGP_WSBEiJ_G0011049.1 mouse_genomes_project 17 26533845 26534114 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011614.1 MGP_WSBEiJ_G0009761.1 mouse_genomes_project 17 36021471 36116454 - polymorphic_pseudogene retained_intron MGP_WSBEiJ_T0044921.1 MGP_WSBEiJ_G0022572.1 mouse_genomes_project 17 22676490 22677308 + MGP_WSBEiJ_P0044921 protein_coding protein_coding MGP_WSBEiJ_T0045634.1 MGP_WSBEiJ_G0022738.1 mouse_genomes_project 17 28007922 28040718 + MGP_WSBEiJ_P0045634 Pnpla1 protein_coding protein_coding MGP_WSBEiJ_T0045635.1 MGP_WSBEiJ_G0022738.1 mouse_genomes_project 17 28007922 28040718 + MGP_WSBEiJ_P0045635 Pnpla1 protein_coding protein_coding MGP_WSBEiJ_T0047017.1 MGP_WSBEiJ_G0023116.1 mouse_genomes_project 17 48679057 48707804 - MGP_WSBEiJ_P0047017 1700001C19Rik protein_coding protein_coding MGP_WSBEiJ_T0047018.1 MGP_WSBEiJ_G0023116.1 mouse_genomes_project 17 48679698 48689986 - MGP_WSBEiJ_P0047018 1700001C19Rik protein_coding protein_coding MGP_WSBEiJ_T0047019.1 MGP_WSBEiJ_G0023116.1 mouse_genomes_project 17 48679706 48681035 - 1700001C19Rik protein_coding processed_transcript MGP_WSBEiJ_T0047020.1 MGP_WSBEiJ_G0023116.1 mouse_genomes_project 17 48679951 48707805 - 1700001C19Rik protein_coding processed_transcript MGP_WSBEiJ_T0006795.1 MGP_WSBEiJ_G0005598.1 mouse_genomes_project 17 8168102 8172805 + 1700110C19Rik lincRNA lincRNA MGP_WSBEiJ_T0006796.1 MGP_WSBEiJ_G0005598.1 mouse_genomes_project 17 8168102 8172805 + 1700110C19Rik lincRNA lincRNA MGP_WSBEiJ_T0045742.1 MGP_WSBEiJ_G0022764.1 mouse_genomes_project 17 29903022 30170330 + MGP_WSBEiJ_P0045742 Dnah8 protein_coding protein_coding MGP_WSBEiJ_T0047820.1 MGP_WSBEiJ_G0023388.1 mouse_genomes_project 17 96787747 96793810 + MGP_WSBEiJ_P0047820 Adcyap1 protein_coding protein_coding MGP_WSBEiJ_T0100670.1 MGP_WSBEiJ_G0039128.1 mouse_genomes_project 17 37775989 37776710 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046531.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35872402 35891911 - MGP_WSBEiJ_P0046531 Atat1 protein_coding protein_coding MGP_WSBEiJ_T0046532.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35872416 35891882 - MGP_WSBEiJ_P0046532 Atat1 protein_coding protein_coding MGP_WSBEiJ_T0046533.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35872419 35891893 - MGP_WSBEiJ_P0046533 Atat1 protein_coding protein_coding MGP_WSBEiJ_T0046534.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35872422 35873390 - Atat1 protein_coding retained_intron MGP_WSBEiJ_T0046535.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35872689 35890797 - MGP_WSBEiJ_P0046535 Atat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046536.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35875891 35891881 - MGP_WSBEiJ_P0046536 Atat1 protein_coding protein_coding MGP_WSBEiJ_T0046537.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35875926 35891881 - MGP_WSBEiJ_P0046537 Atat1 protein_coding protein_coding MGP_WSBEiJ_T0046538.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35876569 35880388 - MGP_WSBEiJ_P0046538 Atat1 protein_coding protein_coding MGP_WSBEiJ_T0046539.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35878060 35891271 - Atat1 protein_coding retained_intron MGP_WSBEiJ_T0046540.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35878077 35891409 - Atat1 protein_coding processed_transcript MGP_WSBEiJ_T0046541.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35878081 35890875 - Atat1 protein_coding retained_intron MGP_WSBEiJ_T0046542.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35878114 35891462 - MGP_WSBEiJ_P0046542 Atat1 protein_coding protein_coding MGP_WSBEiJ_T0046543.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35879391 35891575 - Atat1 protein_coding retained_intron MGP_WSBEiJ_T0046544.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35889800 35891881 - Atat1 protein_coding processed_transcript MGP_WSBEiJ_T0046545.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35890419 35891867 - MGP_WSBEiJ_P0046545 Atat1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046546.1 MGP_WSBEiJ_G0022943.1 mouse_genomes_project 17 35890766 35891845 - Atat1 protein_coding retained_intron MGP_WSBEiJ_T0046979.1 MGP_WSBEiJ_G0023100.1 mouse_genomes_project 17 47869863 47893475 - MGP_WSBEiJ_P0046979 Ppp2r5d protein_coding protein_coding MGP_WSBEiJ_T0100649.1 MGP_WSBEiJ_G0039107.1 mouse_genomes_project 17 36448952 36678705 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045269.1 MGP_WSBEiJ_G0022660.1 mouse_genomes_project 17 24672333 24677433 + MGP_WSBEiJ_P0045269 Wdr24 protein_coding protein_coding MGP_WSBEiJ_T0045270.1 MGP_WSBEiJ_G0022660.1 mouse_genomes_project 17 24672355 24677424 + Wdr24 protein_coding retained_intron MGP_WSBEiJ_T0045271.1 MGP_WSBEiJ_G0022660.1 mouse_genomes_project 17 24673236 24674377 + Wdr24 protein_coding processed_transcript MGP_WSBEiJ_T0045272.1 MGP_WSBEiJ_G0022660.1 mouse_genomes_project 17 24673368 24675050 + Wdr24 protein_coding retained_intron MGP_WSBEiJ_T0046686.1 MGP_WSBEiJ_G0022985.1 mouse_genomes_project 17 37628821 37629508 - MGP_WSBEiJ_P0046686 Olfr99 protein_coding protein_coding MGP_WSBEiJ_T0012897.1 MGP_WSBEiJ_G0011027.1 mouse_genomes_project 17 2954110 2954594 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047103.1 MGP_WSBEiJ_G0023135.1 mouse_genomes_project 17 49605291 49618860 + MGP_WSBEiJ_P0047103 Trem1 protein_coding protein_coding MGP_WSBEiJ_T0047104.1 MGP_WSBEiJ_G0023135.1 mouse_genomes_project 17 49605294 49619422 + MGP_WSBEiJ_P0047104 Trem1 protein_coding protein_coding MGP_WSBEiJ_T0047696.1 MGP_WSBEiJ_G0023352.1 mouse_genomes_project 17 87819450 87838598 + MGP_WSBEiJ_P0047696 Abcg8 protein_coding protein_coding MGP_WSBEiJ_T0047697.1 MGP_WSBEiJ_G0023352.1 mouse_genomes_project 17 87819561 87838606 + MGP_WSBEiJ_P0047697 Abcg8 protein_coding protein_coding MGP_WSBEiJ_T0016973.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34478930 34496289 - processed_transcript processed_transcript MGP_WSBEiJ_T0016974.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34478930 34479592 - processed_transcript retained_intron MGP_WSBEiJ_T0016975.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34478932 34496289 - processed_transcript processed_transcript MGP_WSBEiJ_T0016976.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34478932 34496289 - processed_transcript processed_transcript MGP_WSBEiJ_T0016977.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34479319 34481238 - processed_transcript retained_intron MGP_WSBEiJ_T0016978.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34479800 34481244 - processed_transcript processed_transcript MGP_WSBEiJ_T0016979.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34480964 34481959 - processed_transcript processed_transcript MGP_WSBEiJ_T0016980.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34480964 34496289 - processed_transcript processed_transcript MGP_WSBEiJ_T0016981.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34481168 34481959 - processed_transcript retained_intron MGP_WSBEiJ_T0016982.1 MGP_WSBEiJ_G0014770.1 mouse_genomes_project 17 34483466 34484766 - processed_transcript retained_intron MGP_WSBEiJ_T0100647.1 MGP_WSBEiJ_G0039105.1 mouse_genomes_project 17 36308359 36308465 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010047.1 MGP_WSBEiJ_G0008204.1 mouse_genomes_project 17 35899715 35899796 + Mir1894 miRNA miRNA MGP_WSBEiJ_T0047155.1 MGP_WSBEiJ_G0023149.1 mouse_genomes_project 17 50904106 51016417 - MGP_WSBEiJ_P0047155 Daam2 protein_coding protein_coding MGP_WSBEiJ_T0047156.1 MGP_WSBEiJ_G0023149.1 mouse_genomes_project 17 50925835 51016408 - MGP_WSBEiJ_P0047156 Daam2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046689.1 MGP_WSBEiJ_G0022987.1 mouse_genomes_project 17 37773703 37774738 + MGP_WSBEiJ_P0046689 Olfr107 protein_coding protein_coding MGP_WSBEiJ_T0000968.1 MGP_WSBEiJ_G0000903.1 mouse_genomes_project 17 82682396 82704390 - TEC TEC MGP_WSBEiJ_T0012908.1 MGP_WSBEiJ_G0011038.1 mouse_genomes_project 17 10730255 10731279 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047213.1 MGP_WSBEiJ_G0023172.1 mouse_genomes_project 17 57675775 57690472 - MGP_WSBEiJ_P0047213 protein_coding protein_coding MGP_WSBEiJ_T0047334.1 MGP_WSBEiJ_G0023223.1 mouse_genomes_project 17 58892320 58900114 + MGP_WSBEiJ_P0047334 Crb3 protein_coding protein_coding MGP_WSBEiJ_T0047335.1 MGP_WSBEiJ_G0023223.1 mouse_genomes_project 17 58895417 58900120 + MGP_WSBEiJ_P0047335 Crb3 protein_coding protein_coding MGP_WSBEiJ_T0047336.1 MGP_WSBEiJ_G0023223.1 mouse_genomes_project 17 58895469 58900119 + MGP_WSBEiJ_P0047336 Crb3 protein_coding protein_coding MGP_WSBEiJ_T0047337.1 MGP_WSBEiJ_G0023223.1 mouse_genomes_project 17 58895485 58899629 + MGP_WSBEiJ_P0047337 Crb3 protein_coding protein_coding MGP_WSBEiJ_T0047338.1 MGP_WSBEiJ_G0023223.1 mouse_genomes_project 17 58895694 58899366 + MGP_WSBEiJ_P0047338 Crb3 protein_coding protein_coding MGP_WSBEiJ_T0044653.1 MGP_WSBEiJ_G0022457.1 mouse_genomes_project 17 10843156 10868563 - MGP_WSBEiJ_P0044653 Acat3 protein_coding protein_coding MGP_WSBEiJ_T0044654.1 MGP_WSBEiJ_G0022457.1 mouse_genomes_project 17 10843365 10868563 - MGP_WSBEiJ_P0044654 Acat3 protein_coding protein_coding MGP_WSBEiJ_T0044655.1 MGP_WSBEiJ_G0022457.1 mouse_genomes_project 17 10844049 10847927 - Acat3 protein_coding retained_intron MGP_WSBEiJ_T0012927.1 MGP_WSBEiJ_G0011057.1 mouse_genomes_project 17 35512288 35512484 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099230.1 MGP_WSBEiJ_G0037893.1 mouse_genomes_project 17 10206484 10206624 + Gm24794 snoRNA snoRNA MGP_WSBEiJ_T0010053.1 MGP_WSBEiJ_G0008210.1 mouse_genomes_project 17 57924768 57924881 - Gm44397 miRNA miRNA MGP_WSBEiJ_T0100234.1 MGP_WSBEiJ_G0038779.1 mouse_genomes_project 17 31446443 31465157 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100235.1 MGP_WSBEiJ_G0038779.1 mouse_genomes_project 17 31446861 31477274 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100236.1 MGP_WSBEiJ_G0038779.1 mouse_genomes_project 17 31449109 31485836 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0045303.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24693447 24711746 - Wdr90 protein_coding retained_intron MGP_WSBEiJ_T0045304.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24693447 24711838 - MGP_WSBEiJ_P0045304 Wdr90 protein_coding protein_coding MGP_WSBEiJ_T0045305.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24693449 24711831 - Wdr90 protein_coding retained_intron MGP_WSBEiJ_T0045306.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24693744 24711864 - MGP_WSBEiJ_P0045306 Wdr90 protein_coding protein_coding MGP_WSBEiJ_T0045307.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24694064 24695171 - Wdr90 protein_coding retained_intron MGP_WSBEiJ_T0045308.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24697245 24700400 - Wdr90 protein_coding retained_intron MGP_WSBEiJ_T0045309.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24698632 24700507 - Wdr90 protein_coding retained_intron MGP_WSBEiJ_T0045310.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24700550 24702531 - Wdr90 protein_coding retained_intron MGP_WSBEiJ_T0045311.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24701975 24711838 - Wdr90 protein_coding retained_intron MGP_WSBEiJ_T0045312.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24702465 24703936 - Wdr90 protein_coding retained_intron MGP_WSBEiJ_T0045313.1 MGP_WSBEiJ_G0022666.1 mouse_genomes_project 17 24704420 24709589 - MGP_WSBEiJ_P0045313 Wdr90 protein_coding protein_coding MGP_WSBEiJ_T0045692.1 MGP_WSBEiJ_G0022751.1 mouse_genomes_project 17 28557739 28577727 + MGP_WSBEiJ_P0045692 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045693.1 MGP_WSBEiJ_G0022751.1 mouse_genomes_project 17 28557757 28563034 + protein_coding processed_transcript MGP_WSBEiJ_T0045694.1 MGP_WSBEiJ_G0022751.1 mouse_genomes_project 17 28557767 28564975 + protein_coding retained_intron MGP_WSBEiJ_T0045695.1 MGP_WSBEiJ_G0022751.1 mouse_genomes_project 17 28557767 28577620 + MGP_WSBEiJ_P0045695 protein_coding protein_coding MGP_WSBEiJ_T0045696.1 MGP_WSBEiJ_G0022751.1 mouse_genomes_project 17 28563411 28565930 + protein_coding retained_intron MGP_WSBEiJ_T0045697.1 MGP_WSBEiJ_G0022751.1 mouse_genomes_project 17 28566935 28573097 + protein_coding retained_intron MGP_WSBEiJ_T0045698.1 MGP_WSBEiJ_G0022751.1 mouse_genomes_project 17 28566947 28572469 + protein_coding retained_intron MGP_WSBEiJ_T0045699.1 MGP_WSBEiJ_G0022751.1 mouse_genomes_project 17 28574606 28576515 + protein_coding processed_transcript MGP_WSBEiJ_T0045987.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33453751 33455761 + MGP_WSBEiJ_P0045987 Daxx protein_coding protein_coding MGP_WSBEiJ_T0045988.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33453782 33459887 + MGP_WSBEiJ_P0045988 Daxx protein_coding protein_coding MGP_WSBEiJ_T0045989.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33453835 33455850 + MGP_WSBEiJ_P0045989 Daxx protein_coding protein_coding MGP_WSBEiJ_T0045990.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33453852 33459814 + MGP_WSBEiJ_P0045990 Daxx protein_coding protein_coding MGP_WSBEiJ_T0045991.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33453938 33459879 + MGP_WSBEiJ_P0045991 Daxx protein_coding protein_coding MGP_WSBEiJ_T0045992.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33454614 33456235 + Daxx protein_coding retained_intron MGP_WSBEiJ_T0045993.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33454763 33459879 + MGP_WSBEiJ_P0045993 Daxx protein_coding protein_coding MGP_WSBEiJ_T0045994.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33457084 33458287 + Daxx protein_coding processed_transcript MGP_WSBEiJ_T0045995.1 MGP_WSBEiJ_G0022829.1 mouse_genomes_project 17 33457846 33459814 + Daxx protein_coding processed_transcript MGP_WSBEiJ_T0006839.1 MGP_WSBEiJ_G0005633.1 mouse_genomes_project 17 33586038 33586143 - Gm26940 lincRNA lincRNA MGP_WSBEiJ_T0100675.1 MGP_WSBEiJ_G0039133.1 mouse_genomes_project 17 55481428 55482048 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047121.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49780220 49803886 - MGP_WSBEiJ_P0047121 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047122.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49780224 49804027 - MGP_WSBEiJ_P0047122 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047123.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49780231 49803886 - MGP_WSBEiJ_P0047123 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047124.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49782340 49793880 - MGP_WSBEiJ_P0047124 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047125.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49782416 49803851 - MGP_WSBEiJ_P0047125 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047126.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49782444 49786559 - MGP_WSBEiJ_P0047126 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047127.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49782559 49786795 - MGP_WSBEiJ_P0047127 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047128.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49784215 49785481 - Nfya protein_coding retained_intron MGP_WSBEiJ_T0047129.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49785351 49792374 - MGP_WSBEiJ_P0047129 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047130.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49785379 49803862 - MGP_WSBEiJ_P0047130 Nfya protein_coding protein_coding MGP_WSBEiJ_T0047131.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49786553 49789390 - Nfya protein_coding retained_intron MGP_WSBEiJ_T0047132.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49788698 49803809 - Nfya protein_coding retained_intron MGP_WSBEiJ_T0047133.1 MGP_WSBEiJ_G0023142.1 mouse_genomes_project 17 49791262 49803871 - Nfya protein_coding retained_intron MGP_WSBEiJ_T0047790.1 MGP_WSBEiJ_G0023384.1 mouse_genomes_project 17 92169383 92221024 - MGP_WSBEiJ_P0047790 Lhcgr protein_coding protein_coding MGP_WSBEiJ_T0006874.1 MGP_WSBEiJ_G0005658.1 mouse_genomes_project 17 71819836 71824067 + C030034I22Rik lincRNA lincRNA MGP_WSBEiJ_T0006875.1 MGP_WSBEiJ_G0005658.1 mouse_genomes_project 17 71819895 71821366 + C030034I22Rik lincRNA lincRNA MGP_WSBEiJ_T0099243.1 MGP_WSBEiJ_G0037906.1 mouse_genomes_project 17 35056696 35056772 + Gm25128 snoRNA snoRNA MGP_WSBEiJ_T0047310.1 MGP_WSBEiJ_G0023210.1 mouse_genomes_project 17 58581440 58583399 + Prr22 protein_coding retained_intron MGP_WSBEiJ_T0047311.1 MGP_WSBEiJ_G0023210.1 mouse_genomes_project 17 58581466 58583325 + MGP_WSBEiJ_P0047311 Prr22 protein_coding protein_coding MGP_WSBEiJ_T0047485.1 MGP_WSBEiJ_G0023272.1 mouse_genomes_project 17 73410362 73410854 + MGP_WSBEiJ_P0047485 Gm16519 protein_coding protein_coding MGP_WSBEiJ_T0046486.1 MGP_WSBEiJ_G0022935.1 mouse_genomes_project 17 35790601 35791845 + MGP_WSBEiJ_P0046486 Ier3 protein_coding protein_coding MGP_WSBEiJ_T0010011.1 MGP_WSBEiJ_G0008168.1 mouse_genomes_project 17 16033207 16033300 + Mirlet7e miRNA miRNA MGP_WSBEiJ_T0012930.1 MGP_WSBEiJ_G0011060.1 mouse_genomes_project 17 36278399 36278585 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046608.1 MGP_WSBEiJ_G0022959.1 mouse_genomes_project 17 36862032 36865414 - MGP_WSBEiJ_P0046608 protein_coding protein_coding MGP_WSBEiJ_T0046609.1 MGP_WSBEiJ_G0022959.1 mouse_genomes_project 17 36863153 36865414 - MGP_WSBEiJ_P0046609 protein_coding protein_coding MGP_WSBEiJ_T0044547.1 MGP_WSBEiJ_G0022425.1 mouse_genomes_project 17 5426084 5463542 + MGP_WSBEiJ_P0044547 protein_coding protein_coding MGP_WSBEiJ_T0047287.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58362331 58380759 + protein_coding retained_intron MGP_WSBEiJ_T0047288.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58362480 58391095 + MGP_WSBEiJ_P0047288 protein_coding protein_coding MGP_WSBEiJ_T0047289.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58362488 58377972 + MGP_WSBEiJ_P0047289 protein_coding protein_coding MGP_WSBEiJ_T0047290.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58362565 58391175 + MGP_WSBEiJ_P0047290 protein_coding protein_coding MGP_WSBEiJ_T0047291.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58366342 58386097 + MGP_WSBEiJ_P0047291 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047292.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58378727 58380747 + protein_coding retained_intron MGP_WSBEiJ_T0047293.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58383725 58390981 + MGP_WSBEiJ_P0047293 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047294.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58386253 58389296 + protein_coding retained_intron MGP_WSBEiJ_T0047295.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58387857 58389431 + protein_coding retained_intron MGP_WSBEiJ_T0047296.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58389246 58390529 + protein_coding retained_intron MGP_WSBEiJ_T0047297.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58390109 58391175 + protein_coding retained_intron MGP_WSBEiJ_T0047298.1 MGP_WSBEiJ_G0023200.1 mouse_genomes_project 17 58390615 58391155 + protein_coding retained_intron MGP_WSBEiJ_T0047309.1 MGP_WSBEiJ_G0023209.1 mouse_genomes_project 17 58574956 58581283 + MGP_WSBEiJ_P0047309 Dus3l protein_coding protein_coding MGP_WSBEiJ_T0006856.1 MGP_WSBEiJ_G0005649.1 mouse_genomes_project 17 49251003 49254728 + lincRNA lincRNA MGP_WSBEiJ_T0098013.1 MGP_WSBEiJ_G0036676.1 mouse_genomes_project 17 82935285 82935381 + Gm22215 snRNA snRNA MGP_WSBEiJ_T0044690.1 MGP_WSBEiJ_G0022468.1 mouse_genomes_project 17 12269431 12282261 - MGP_WSBEiJ_P0044690 Dact2 protein_coding protein_coding MGP_WSBEiJ_T0100619.1 MGP_WSBEiJ_G0039077.1 mouse_genomes_project 17 18886769 18887373 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046207.1 MGP_WSBEiJ_G0022875.1 mouse_genomes_project 17 34557098 34563457 - MGP_WSBEiJ_P0046207 Cyp21a1 protein_coding protein_coding MGP_WSBEiJ_T0046208.1 MGP_WSBEiJ_G0022875.1 mouse_genomes_project 17 34562467 34563303 - Cyp21a1 protein_coding processed_transcript MGP_WSBEiJ_T0044825.1 MGP_WSBEiJ_G0022538.1 mouse_genomes_project 17 20461590 20502377 - MGP_WSBEiJ_P0044825 protein_coding protein_coding MGP_WSBEiJ_T0046968.1 MGP_WSBEiJ_G0023096.1 mouse_genomes_project 17 47835868 47849810 + MGP_WSBEiJ_P0046968 Cul7 protein_coding protein_coding MGP_WSBEiJ_T0046969.1 MGP_WSBEiJ_G0023096.1 mouse_genomes_project 17 47836094 47840379 + Cul7 protein_coding retained_intron MGP_WSBEiJ_T0046970.1 MGP_WSBEiJ_G0023096.1 mouse_genomes_project 17 47836103 47842529 + Cul7 protein_coding retained_intron MGP_WSBEiJ_T0046971.1 MGP_WSBEiJ_G0023096.1 mouse_genomes_project 17 47836954 47849810 + MGP_WSBEiJ_P0046971 Cul7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046972.1 MGP_WSBEiJ_G0023096.1 mouse_genomes_project 17 47838382 47841101 + Cul7 protein_coding processed_transcript MGP_WSBEiJ_T0046973.1 MGP_WSBEiJ_G0023096.1 mouse_genomes_project 17 47838424 47849810 + MGP_WSBEiJ_P0046973 Cul7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046974.1 MGP_WSBEiJ_G0023096.1 mouse_genomes_project 17 47847237 47849810 + Cul7 protein_coding retained_intron MGP_WSBEiJ_T0044881.1 MGP_WSBEiJ_G0022557.1 mouse_genomes_project 17 22365882 22367884 - MGP_WSBEiJ_P0044881 Tnfrsf12a protein_coding protein_coding MGP_WSBEiJ_T0044882.1 MGP_WSBEiJ_G0022557.1 mouse_genomes_project 17 22365882 22367884 - MGP_WSBEiJ_P0044882 Tnfrsf12a protein_coding protein_coding MGP_WSBEiJ_T0011236.1 MGP_WSBEiJ_G0009393.1 mouse_genomes_project 17 88790616 88790704 + Gm27435 misc_RNA misc_RNA MGP_WSBEiJ_T0011229.1 MGP_WSBEiJ_G0009386.1 mouse_genomes_project 17 48225722 48226016 - Gm23657 misc_RNA misc_RNA MGP_WSBEiJ_T0044993.1 MGP_WSBEiJ_G0022590.1 mouse_genomes_project 17 23220152 23233353 - MGP_WSBEiJ_P0044993 E4f1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044994.1 MGP_WSBEiJ_G0022590.1 mouse_genomes_project 17 23220172 23231646 - MGP_WSBEiJ_P0044994 E4f1 protein_coding protein_coding MGP_WSBEiJ_T0046340.1 MGP_WSBEiJ_G0022901.1 mouse_genomes_project 17 34863489 34864882 + MGP_WSBEiJ_P0046340 Ly6g6e protein_coding protein_coding MGP_WSBEiJ_T0046341.1 MGP_WSBEiJ_G0022901.1 mouse_genomes_project 17 34863518 34865138 + MGP_WSBEiJ_P0046341 Ly6g6e protein_coding protein_coding MGP_WSBEiJ_T0046342.1 MGP_WSBEiJ_G0022901.1 mouse_genomes_project 17 34863524 34865388 + MGP_WSBEiJ_P0046342 Ly6g6e protein_coding protein_coding MGP_WSBEiJ_T0046343.1 MGP_WSBEiJ_G0022901.1 mouse_genomes_project 17 34863742 34864873 + MGP_WSBEiJ_P0046343 Ly6g6e protein_coding protein_coding MGP_WSBEiJ_T0100620.1 MGP_WSBEiJ_G0039078.1 mouse_genomes_project 17 19403975 19404914 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045601.1 MGP_WSBEiJ_G0022730.1 mouse_genomes_project 17 27672615 27677687 + MGP_WSBEiJ_P0045601 Clpsl2 protein_coding protein_coding MGP_WSBEiJ_T0046961.1 MGP_WSBEiJ_G0023093.1 mouse_genomes_project 17 47737616 47810803 - MGP_WSBEiJ_P0046961 Ptk7 protein_coding protein_coding MGP_WSBEiJ_T0011221.1 MGP_WSBEiJ_G0009378.1 mouse_genomes_project 17 28230819 28230991 + Gm27599 misc_RNA misc_RNA MGP_WSBEiJ_T0046186.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34333547 34347480 - MGP_WSBEiJ_P0046186 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046187.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34333548 34347421 - MGP_WSBEiJ_P0046187 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046188.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34333549 34347192 - MGP_WSBEiJ_P0046188 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046189.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34334115 34347563 - MGP_WSBEiJ_P0046189 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046190.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34334115 34348077 - MGP_WSBEiJ_P0046190 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046191.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34334115 34347523 - MGP_WSBEiJ_P0046191 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046192.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34334200 34346972 - MGP_WSBEiJ_P0046192 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046193.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34341062 34348548 - MGP_WSBEiJ_P0046193 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046194.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34341258 34347471 - MGP_WSBEiJ_P0046194 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0046195.1 MGP_WSBEiJ_G0022870.1 mouse_genomes_project 17 34346532 34347194 - MGP_WSBEiJ_P0046195 Ppt2 protein_coding protein_coding MGP_WSBEiJ_T0006855.1 MGP_WSBEiJ_G0005648.1 mouse_genomes_project 17 47635573 48039044 + lincRNA lincRNA MGP_WSBEiJ_T0047735.1 MGP_WSBEiJ_G0023370.1 mouse_genomes_project 17 90545844 90556898 - MGP_WSBEiJ_P0047735 Mcfd2 protein_coding protein_coding MGP_WSBEiJ_T0047736.1 MGP_WSBEiJ_G0023370.1 mouse_genomes_project 17 90545846 90556867 - MGP_WSBEiJ_P0047736 Mcfd2 protein_coding protein_coding MGP_WSBEiJ_T0047737.1 MGP_WSBEiJ_G0023370.1 mouse_genomes_project 17 90546974 90556843 - MGP_WSBEiJ_P0047737 Mcfd2 protein_coding protein_coding MGP_WSBEiJ_T0047738.1 MGP_WSBEiJ_G0023370.1 mouse_genomes_project 17 90547156 90556858 - MGP_WSBEiJ_P0047738 Mcfd2 protein_coding protein_coding MGP_WSBEiJ_T0047739.1 MGP_WSBEiJ_G0023370.1 mouse_genomes_project 17 90547944 90556837 - MGP_WSBEiJ_P0047739 Mcfd2 protein_coding protein_coding MGP_WSBEiJ_T0047740.1 MGP_WSBEiJ_G0023370.1 mouse_genomes_project 17 90548417 90556843 - MGP_WSBEiJ_P0047740 Mcfd2 protein_coding protein_coding MGP_WSBEiJ_T0047741.1 MGP_WSBEiJ_G0023370.1 mouse_genomes_project 17 90549746 90556826 - Mcfd2 protein_coding processed_transcript MGP_WSBEiJ_T0047369.1 MGP_WSBEiJ_G0023240.1 mouse_genomes_project 17 64669346 64957768 - MGP_WSBEiJ_P0047369 Efna5 protein_coding protein_coding MGP_WSBEiJ_T0047370.1 MGP_WSBEiJ_G0023240.1 mouse_genomes_project 17 64672726 64957595 - MGP_WSBEiJ_P0047370 Efna5 protein_coding protein_coding MGP_WSBEiJ_T0046707.1 MGP_WSBEiJ_G0023004.1 mouse_genomes_project 17 38233172 38234294 + MGP_WSBEiJ_P0046707 Olfr124 protein_coding protein_coding MGP_WSBEiJ_T0046403.1 MGP_WSBEiJ_G0022915.1 mouse_genomes_project 17 35002466 35005095 - MGP_WSBEiJ_P0046403 Tnf protein_coding protein_coding MGP_WSBEiJ_T0046404.1 MGP_WSBEiJ_G0022915.1 mouse_genomes_project 17 35002592 35005092 - MGP_WSBEiJ_P0046404 Tnf protein_coding protein_coding MGP_WSBEiJ_T0044574.1 MGP_WSBEiJ_G0022435.1 mouse_genomes_project 17 6071820 6089172 + MGP_WSBEiJ_P0044574 protein_coding protein_coding MGP_WSBEiJ_T0097999.1 MGP_WSBEiJ_G0036662.1 mouse_genomes_project 17 44453145 44453288 + Gm25135 snRNA snRNA MGP_WSBEiJ_T0046682.1 MGP_WSBEiJ_G0022981.1 mouse_genomes_project 17 37543078 37544129 + MGP_WSBEiJ_P0046682 Olfr96 protein_coding protein_coding MGP_WSBEiJ_T0012955.1 MGP_WSBEiJ_G0011085.1 mouse_genomes_project 17 55567715 55568060 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047046.1 MGP_WSBEiJ_G0023123.1 mouse_genomes_project 17 48930749 48990281 + MGP_WSBEiJ_P0047046 Usp49 protein_coding protein_coding MGP_WSBEiJ_T0047047.1 MGP_WSBEiJ_G0023123.1 mouse_genomes_project 17 48951555 48974509 + MGP_WSBEiJ_P0047047 Usp49 protein_coding protein_coding MGP_WSBEiJ_T0047048.1 MGP_WSBEiJ_G0023123.1 mouse_genomes_project 17 48975044 48983381 + MGP_WSBEiJ_P0047048 Usp49 protein_coding protein_coding MGP_WSBEiJ_T0047049.1 MGP_WSBEiJ_G0023123.1 mouse_genomes_project 17 48975625 48983053 + MGP_WSBEiJ_P0047049 Usp49 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044569.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6071756 6089167 + Sft2d1 protein_coding retained_intron MGP_WSBEiJ_T0044570.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6071756 6089167 + MGP_WSBEiJ_P0044570 Sft2d1 protein_coding protein_coding MGP_WSBEiJ_T0044571.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6071763 6158258 + Sft2d1 protein_coding processed_transcript MGP_WSBEiJ_T0044572.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6071776 6088781 + MGP_WSBEiJ_P0044572 Sft2d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044573.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6071793 6088734 + Sft2d1 protein_coding processed_transcript MGP_WSBEiJ_T0044575.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6071823 6089165 + MGP_WSBEiJ_P0044575 Sft2d1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044576.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6071829 6079943 + Sft2d1 protein_coding retained_intron MGP_WSBEiJ_T0044577.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6071877 6086184 + MGP_WSBEiJ_P0044577 Sft2d1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044578.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6080463 6086184 + Sft2d1 protein_coding retained_intron MGP_WSBEiJ_T0044579.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6082282 6088788 + Sft2d1 protein_coding retained_intron MGP_WSBEiJ_T0044580.1 MGP_WSBEiJ_G0022434.1 mouse_genomes_project 17 6086106 6089165 + Sft2d1 protein_coding retained_intron MGP_WSBEiJ_T0046709.1 MGP_WSBEiJ_G0023006.1 mouse_genomes_project 17 38311192 38313359 + MGP_WSBEiJ_P0046709 Olfr127 protein_coding protein_coding MGP_WSBEiJ_T0044739.1 MGP_WSBEiJ_G0022482.1 mouse_genomes_project 17 13939277 13959590 - MGP_WSBEiJ_P0044739 Rgmb protein_coding protein_coding MGP_WSBEiJ_T0047342.1 MGP_WSBEiJ_G0023227.1 mouse_genomes_project 17 58940995 58944153 + MGP_WSBEiJ_P0047342 Tnfsf9 protein_coding protein_coding MGP_WSBEiJ_T0006835.1 MGP_WSBEiJ_G0005630.1 mouse_genomes_project 17 33305392 33307774 - 4931413I07Rik lincRNA lincRNA MGP_WSBEiJ_T0045349.1 MGP_WSBEiJ_G0022674.1 mouse_genomes_project 17 24811505 24823257 + MGP_WSBEiJ_P0045349 D630044L22Rik protein_coding protein_coding MGP_WSBEiJ_T0100605.1 MGP_WSBEiJ_G0039063.1 mouse_genomes_project 17 16332729 17521646 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047766.1 MGP_WSBEiJ_G0023377.1 mouse_genomes_project 17 91256676 91257093 + MGP_WSBEiJ_P0047766 Rpl36-ps4 protein_coding protein_coding MGP_WSBEiJ_T0046726.1 MGP_WSBEiJ_G0023017.1 mouse_genomes_project 17 38850797 38854509 - MGP_WSBEiJ_P0046726 Esp36 protein_coding protein_coding MGP_WSBEiJ_T0100611.1 MGP_WSBEiJ_G0039069.1 mouse_genomes_project 17 17847473 17848671 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0003678.1 MGP_WSBEiJ_G0003312.1 mouse_genomes_project 17 34758217 34763131 - Gm10501 antisense antisense MGP_WSBEiJ_T0047553.1 MGP_WSBEiJ_G0023294.1 mouse_genomes_project 17 76683849 76714732 - MGP_WSBEiJ_P0047553 Srd5a2 protein_coding protein_coding MGP_WSBEiJ_T0010040.1 MGP_WSBEiJ_G0008197.1 mouse_genomes_project 17 34612788 34612855 - Mir6970 miRNA miRNA MGP_WSBEiJ_T0000959.1 MGP_WSBEiJ_G0000894.1 mouse_genomes_project 17 53344860 53346857 - TEC TEC MGP_WSBEiJ_T0003626.1 MGP_WSBEiJ_G0003281.1 mouse_genomes_project 17 2499092 2528386 + Gm29050 antisense antisense MGP_WSBEiJ_T0003627.1 MGP_WSBEiJ_G0003281.1 mouse_genomes_project 17 2515166 2530640 + Gm29050 antisense antisense MGP_WSBEiJ_T0047447.1 MGP_WSBEiJ_G0023265.1 mouse_genomes_project 17 70631926 70818512 + L3mbtl4 protein_coding retained_intron MGP_WSBEiJ_T0047448.1 MGP_WSBEiJ_G0023265.1 mouse_genomes_project 17 70631926 70996358 + MGP_WSBEiJ_P0047448 L3mbtl4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047449.1 MGP_WSBEiJ_G0023265.1 mouse_genomes_project 17 70631926 71007746 + MGP_WSBEiJ_P0047449 L3mbtl4 protein_coding protein_coding MGP_WSBEiJ_T0047450.1 MGP_WSBEiJ_G0023265.1 mouse_genomes_project 17 70631926 71149370 + MGP_WSBEiJ_P0047450 L3mbtl4 protein_coding protein_coding MGP_WSBEiJ_T0047791.1 MGP_WSBEiJ_G0023385.1 mouse_genomes_project 17 92426182 92640966 - MGP_WSBEiJ_P0047791 Fshr protein_coding protein_coding MGP_WSBEiJ_T0045032.1 MGP_WSBEiJ_G0022597.1 mouse_genomes_project 17 23331020 23381258 + MGP_WSBEiJ_P0045032 Pkd1 protein_coding protein_coding MGP_WSBEiJ_T0045033.1 MGP_WSBEiJ_G0022597.1 mouse_genomes_project 17 23331333 23381233 + MGP_WSBEiJ_P0045033 Pkd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047187.1 MGP_WSBEiJ_G0023157.1 mouse_genomes_project 17 54992418 55067654 - MGP_WSBEiJ_P0047187 Efhb protein_coding protein_coding MGP_WSBEiJ_T0046392.1 MGP_WSBEiJ_G0022912.1 mouse_genomes_project 17 34968838 34969704 - Aif1 protein_coding retained_intron MGP_WSBEiJ_T0046393.1 MGP_WSBEiJ_G0022912.1 mouse_genomes_project 17 34968838 34970665 - MGP_WSBEiJ_P0046393 Aif1 protein_coding protein_coding MGP_WSBEiJ_T0046394.1 MGP_WSBEiJ_G0022912.1 mouse_genomes_project 17 34968839 34973542 - MGP_WSBEiJ_P0046394 Aif1 protein_coding protein_coding MGP_WSBEiJ_T0046395.1 MGP_WSBEiJ_G0022912.1 mouse_genomes_project 17 34968841 34971124 - MGP_WSBEiJ_P0046395 Aif1 protein_coding protein_coding MGP_WSBEiJ_T0046396.1 MGP_WSBEiJ_G0022912.1 mouse_genomes_project 17 34968843 34973609 - Aif1 protein_coding processed_transcript MGP_WSBEiJ_T0046397.1 MGP_WSBEiJ_G0022912.1 mouse_genomes_project 17 34969370 34970477 - MGP_WSBEiJ_P0046397 Aif1 protein_coding protein_coding MGP_WSBEiJ_T0046398.1 MGP_WSBEiJ_G0022912.1 mouse_genomes_project 17 34970375 34973542 - Aif1 protein_coding retained_intron MGP_WSBEiJ_T0047100.1 MGP_WSBEiJ_G0023133.1 mouse_genomes_project 17 49435792 49437062 + MGP_WSBEiJ_P0047100 1700067P10Rik protein_coding protein_coding MGP_WSBEiJ_T0046697.1 MGP_WSBEiJ_G0022994.1 mouse_genomes_project 17 37956920 37957920 - MGP_WSBEiJ_P0046697 protein_coding protein_coding MGP_WSBEiJ_T0044521.1 MGP_WSBEiJ_G0022415.1 mouse_genomes_project 17 3809562 3816619 - MGP_WSBEiJ_P0044521 protein_coding protein_coding MGP_WSBEiJ_T0044765.1 MGP_WSBEiJ_G0022492.1 mouse_genomes_project 17 16129475 16130384 - MGP_WSBEiJ_P0044765 Gm7535 protein_coding protein_coding MGP_WSBEiJ_T0046947.1 MGP_WSBEiJ_G0023089.1 mouse_genomes_project 17 47603426 47651681 - MGP_WSBEiJ_P0046947 Ttbk1 protein_coding protein_coding MGP_WSBEiJ_T0046948.1 MGP_WSBEiJ_G0023089.1 mouse_genomes_project 17 47618219 47651566 - MGP_WSBEiJ_P0046948 Ttbk1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0100646.1 MGP_WSBEiJ_G0039104.1 mouse_genomes_project 17 36191861 36192794 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0044791.1 MGP_WSBEiJ_G0022517.1 mouse_genomes_project 17 19360351 19361287 - MGP_WSBEiJ_P0044791 Vmn1r231 protein_coding protein_coding MGP_WSBEiJ_T0045614.1 MGP_WSBEiJ_G0022735.1 mouse_genomes_project 17 27828590 27886710 + MGP_WSBEiJ_P0045614 Mapk14 protein_coding protein_coding MGP_WSBEiJ_T0045615.1 MGP_WSBEiJ_G0022735.1 mouse_genomes_project 17 27828590 27879471 + MGP_WSBEiJ_P0045615 Mapk14 protein_coding protein_coding MGP_WSBEiJ_T0045616.1 MGP_WSBEiJ_G0022735.1 mouse_genomes_project 17 27828590 27886710 + MGP_WSBEiJ_P0045616 Mapk14 protein_coding protein_coding MGP_WSBEiJ_T0045617.1 MGP_WSBEiJ_G0022735.1 mouse_genomes_project 17 27828688 27865494 + MGP_WSBEiJ_P0045617 Mapk14 protein_coding protein_coding MGP_WSBEiJ_T0045618.1 MGP_WSBEiJ_G0022735.1 mouse_genomes_project 17 27828988 27886715 + MGP_WSBEiJ_P0045618 Mapk14 protein_coding protein_coding MGP_WSBEiJ_T0045619.1 MGP_WSBEiJ_G0022735.1 mouse_genomes_project 17 27879925 27884663 + Mapk14 protein_coding retained_intron MGP_WSBEiJ_T0046923.1 MGP_WSBEiJ_G0023083.1 mouse_genomes_project 17 47447015 47450599 + MGP_WSBEiJ_P0046923 Dlk2 protein_coding protein_coding MGP_WSBEiJ_T0046924.1 MGP_WSBEiJ_G0023083.1 mouse_genomes_project 17 47447015 47452865 + MGP_WSBEiJ_P0046924 Dlk2 protein_coding protein_coding MGP_WSBEiJ_T0046925.1 MGP_WSBEiJ_G0023083.1 mouse_genomes_project 17 47447419 47452872 + MGP_WSBEiJ_P0046925 Dlk2 protein_coding protein_coding MGP_WSBEiJ_T0003684.1 MGP_WSBEiJ_G0003318.1 mouse_genomes_project 17 35871754 35894048 + Gm16279 antisense antisense MGP_WSBEiJ_T0045068.1 MGP_WSBEiJ_G0022610.1 mouse_genomes_project 17 23527579 23537005 + MGP_WSBEiJ_P0045068 Rpl3l protein_coding unknown_likely_coding MGP_WSBEiJ_T0045069.1 MGP_WSBEiJ_G0022610.1 mouse_genomes_project 17 23527750 23537000 + MGP_WSBEiJ_P0045069 Rpl3l protein_coding protein_coding MGP_WSBEiJ_T0045070.1 MGP_WSBEiJ_G0022610.1 mouse_genomes_project 17 23528104 23534219 + MGP_WSBEiJ_P0045070 Rpl3l protein_coding protein_coding MGP_WSBEiJ_T0045071.1 MGP_WSBEiJ_G0022610.1 mouse_genomes_project 17 23533538 23537000 + MGP_WSBEiJ_P0045071 Rpl3l protein_coding protein_coding MGP_WSBEiJ_T0047657.1 MGP_WSBEiJ_G0023335.1 mouse_genomes_project 17 83466877 83516283 - MGP_WSBEiJ_P0047657 Cdkl4 protein_coding protein_coding MGP_WSBEiJ_T0044975.1 MGP_WSBEiJ_G0022586.1 mouse_genomes_project 17 23115489 23165541 + Abca3 protein_coding retained_intron MGP_WSBEiJ_T0044976.1 MGP_WSBEiJ_G0022586.1 mouse_genomes_project 17 23115562 23179113 + MGP_WSBEiJ_P0044976 Abca3 protein_coding protein_coding MGP_WSBEiJ_T0044977.1 MGP_WSBEiJ_G0022586.1 mouse_genomes_project 17 23115585 23179113 + MGP_WSBEiJ_P0044977 Abca3 protein_coding protein_coding MGP_WSBEiJ_T0044978.1 MGP_WSBEiJ_G0022586.1 mouse_genomes_project 17 23115630 23168721 + Abca3 protein_coding retained_intron MGP_WSBEiJ_T0044979.1 MGP_WSBEiJ_G0022586.1 mouse_genomes_project 17 23115630 23142192 + Abca3 protein_coding retained_intron MGP_WSBEiJ_T0044980.1 MGP_WSBEiJ_G0022586.1 mouse_genomes_project 17 23115642 23124462 + Abca3 protein_coding processed_transcript MGP_WSBEiJ_T0044981.1 MGP_WSBEiJ_G0022586.1 mouse_genomes_project 17 23115647 23150865 + Abca3 protein_coding retained_intron MGP_WSBEiJ_T0044982.1 MGP_WSBEiJ_G0022586.1 mouse_genomes_project 17 23129428 23179113 + MGP_WSBEiJ_P0044982 Abca3 protein_coding protein_coding MGP_WSBEiJ_T0006881.1 MGP_WSBEiJ_G0005663.1 mouse_genomes_project 17 81715359 81727010 + Gm26637 lincRNA lincRNA MGP_WSBEiJ_T0047197.1 MGP_WSBEiJ_G0023161.1 mouse_genomes_project 17 55312376 55327100 - MGP_WSBEiJ_P0047197 Sgol1 protein_coding protein_coding MGP_WSBEiJ_T0047198.1 MGP_WSBEiJ_G0023161.1 mouse_genomes_project 17 55325327 55327053 - Sgol1 protein_coding processed_transcript MGP_WSBEiJ_T0047199.1 MGP_WSBEiJ_G0023161.1 mouse_genomes_project 17 55325474 55327045 - Sgol1 protein_coding processed_transcript MGP_WSBEiJ_T0100612.1 MGP_WSBEiJ_G0039070.1 mouse_genomes_project 17 18231027 18231933 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006845.1 MGP_WSBEiJ_G0005639.1 mouse_genomes_project 17 35708779 35732356 - Gm20442 lincRNA lincRNA MGP_WSBEiJ_T0046718.1 MGP_WSBEiJ_G0023012.1 mouse_genomes_project 17 38605170 38606109 + MGP_WSBEiJ_P0046718 Olfr134 protein_coding protein_coding MGP_WSBEiJ_T0012909.1 MGP_WSBEiJ_G0011039.1 mouse_genomes_project 17 10901622 10902045 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045374.1 MGP_WSBEiJ_G0022682.1 mouse_genomes_project 17 25070095 25073184 - MGP_WSBEiJ_P0045374 Pdia2 protein_coding protein_coding MGP_WSBEiJ_T0045375.1 MGP_WSBEiJ_G0022682.1 mouse_genomes_project 17 25070102 25071013 - MGP_WSBEiJ_P0045375 Pdia2 protein_coding protein_coding MGP_WSBEiJ_T0045376.1 MGP_WSBEiJ_G0022682.1 mouse_genomes_project 17 25070121 25073159 - MGP_WSBEiJ_P0045376 Pdia2 protein_coding protein_coding MGP_WSBEiJ_T0045378.1 MGP_WSBEiJ_G0022682.1 mouse_genomes_project 17 25071590 25073105 - MGP_WSBEiJ_P0045378 Pdia2 protein_coding protein_coding MGP_WSBEiJ_T0098010.1 MGP_WSBEiJ_G0036673.1 mouse_genomes_project 17 75091048 75091178 - Gm24736 snRNA snRNA MGP_WSBEiJ_T0045791.1 MGP_WSBEiJ_G0022778.1 mouse_genomes_project 17 30929412 30954384 + MGP_WSBEiJ_P0045791 Pknox1 protein_coding protein_coding MGP_WSBEiJ_T0045792.1 MGP_WSBEiJ_G0022778.1 mouse_genomes_project 17 30931160 30956587 + MGP_WSBEiJ_P0045792 Pknox1 protein_coding protein_coding MGP_WSBEiJ_T0045793.1 MGP_WSBEiJ_G0022778.1 mouse_genomes_project 17 30931304 30956583 + MGP_WSBEiJ_P0045793 Pknox1 protein_coding protein_coding MGP_WSBEiJ_T0045794.1 MGP_WSBEiJ_G0022778.1 mouse_genomes_project 17 30939915 30940342 + Pknox1 protein_coding processed_transcript MGP_WSBEiJ_T0045795.1 MGP_WSBEiJ_G0022778.1 mouse_genomes_project 17 30942972 30947753 + Pknox1 protein_coding retained_intron MGP_WSBEiJ_T0045796.1 MGP_WSBEiJ_G0022778.1 mouse_genomes_project 17 30951634 30952481 + Pknox1 protein_coding retained_intron MGP_WSBEiJ_T0097994.1 MGP_WSBEiJ_G0036657.1 mouse_genomes_project 17 34833680 34833784 + Gm23421 snRNA snRNA MGP_WSBEiJ_T0100666.1 MGP_WSBEiJ_G0039124.1 mouse_genomes_project 17 37742276 37742646 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0012934.1 MGP_WSBEiJ_G0011064.1 mouse_genomes_project 17 36637367 36637940 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003703.1 MGP_WSBEiJ_G0003332.1 mouse_genomes_project 17 54169026 54181478 - Gm27217 antisense antisense MGP_WSBEiJ_T0047539.1 MGP_WSBEiJ_G0023286.1 mouse_genomes_project 17 74429601 75193629 - MGP_WSBEiJ_P0047539 Alk protein_coding protein_coding MGP_WSBEiJ_T0046643.1 MGP_WSBEiJ_G0022970.1 mouse_genomes_project 17 37255142 37258673 - MGP_WSBEiJ_P0046643 2410137M14Rik protein_coding protein_coding MGP_WSBEiJ_T0046644.1 MGP_WSBEiJ_G0022970.1 mouse_genomes_project 17 37255283 37258653 - MGP_WSBEiJ_P0046644 2410137M14Rik protein_coding protein_coding MGP_WSBEiJ_T0010024.1 MGP_WSBEiJ_G0008181.1 mouse_genomes_project 17 25894892 25894960 + Mir6968 miRNA miRNA MGP_WSBEiJ_T0006880.1 MGP_WSBEiJ_G0005662.1 mouse_genomes_project 17 77281908 77328957 - Gm26749 lincRNA lincRNA MGP_WSBEiJ_T0012933.1 MGP_WSBEiJ_G0011063.1 mouse_genomes_project 17 36361479 36361749 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045638.1 MGP_WSBEiJ_G0022740.1 mouse_genomes_project 17 28093801 28102725 - MGP_WSBEiJ_P0045638 Pxt1 protein_coding protein_coding MGP_WSBEiJ_T0045905.1 MGP_WSBEiJ_G0022814.1 mouse_genomes_project 17 32879008 32911548 - Zfp101 protein_coding processed_transcript MGP_WSBEiJ_T0045906.1 MGP_WSBEiJ_G0022814.1 mouse_genomes_project 17 32895339 32911811 - MGP_WSBEiJ_P0045906 Zfp101 protein_coding protein_coding MGP_WSBEiJ_T0045907.1 MGP_WSBEiJ_G0022814.1 mouse_genomes_project 17 32897439 32911527 - MGP_WSBEiJ_P0045907 Zfp101 protein_coding protein_coding MGP_WSBEiJ_T0045908.1 MGP_WSBEiJ_G0022814.1 mouse_genomes_project 17 32898149 32911793 - MGP_WSBEiJ_P0045908 Zfp101 protein_coding protein_coding MGP_WSBEiJ_T0045909.1 MGP_WSBEiJ_G0022814.1 mouse_genomes_project 17 32901569 32911775 - Zfp101 protein_coding processed_transcript MGP_WSBEiJ_T0046996.1 MGP_WSBEiJ_G0023109.1 mouse_genomes_project 17 48120761 48122604 + MGP_WSBEiJ_P0046996 Tbcc protein_coding protein_coding MGP_WSBEiJ_T0047366.1 MGP_WSBEiJ_G0023239.1 mouse_genomes_project 17 60833470 60848049 - MGP_WSBEiJ_P0047366 Nudt12 protein_coding protein_coding MGP_WSBEiJ_T0047367.1 MGP_WSBEiJ_G0023239.1 mouse_genomes_project 17 60833951 60838375 - Nudt12 protein_coding retained_intron MGP_WSBEiJ_T0047368.1 MGP_WSBEiJ_G0023239.1 mouse_genomes_project 17 60841066 60847945 - MGP_WSBEiJ_P0047368 Nudt12 protein_coding protein_coding MGP_WSBEiJ_T0047099.1 MGP_WSBEiJ_G0023132.1 mouse_genomes_project 17 49382732 49384283 - MGP_WSBEiJ_P0047099 1700122O11Rik protein_coding protein_coding MGP_WSBEiJ_T0097987.1 MGP_WSBEiJ_G0036650.1 mouse_genomes_project 17 23127370 23127477 - Gm25618 snRNA snRNA MGP_WSBEiJ_T0006873.1 MGP_WSBEiJ_G0005657.1 mouse_genomes_project 17 71819094 71842387 - A930029G22Rik lincRNA lincRNA MGP_WSBEiJ_T0047376.1 MGP_WSBEiJ_G0023243.1 mouse_genomes_project 17 65973739 66271302 + MGP_WSBEiJ_P0047376 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047377.1 MGP_WSBEiJ_G0023243.1 mouse_genomes_project 17 66050275 66268414 + MGP_WSBEiJ_P0047377 protein_coding protein_coding MGP_WSBEiJ_T0044472.1 MGP_WSBEiJ_G0022402.1 mouse_genomes_project 17 539672 540332 + MGP_WSBEiJ_P0044472 Cldn20 protein_coding protein_coding MGP_WSBEiJ_T0045286.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24687146 24693528 - MGP_WSBEiJ_P0045286 protein_coding protein_coding MGP_WSBEiJ_T0045287.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24687520 24689832 - protein_coding retained_intron MGP_WSBEiJ_T0045288.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24687522 24693140 - protein_coding retained_intron MGP_WSBEiJ_T0045289.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24687956 24689283 - protein_coding retained_intron MGP_WSBEiJ_T0045290.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24688736 24690346 - protein_coding processed_transcript MGP_WSBEiJ_T0045291.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24689939 24690738 - protein_coding retained_intron MGP_WSBEiJ_T0045292.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690020 24691817 - protein_coding retained_intron MGP_WSBEiJ_T0045293.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690069 24690790 - protein_coding retained_intron MGP_WSBEiJ_T0045294.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690243 24692983 - protein_coding retained_intron MGP_WSBEiJ_T0045295.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690251 24691823 - protein_coding retained_intron MGP_WSBEiJ_T0045296.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690288 24692995 - protein_coding retained_intron MGP_WSBEiJ_T0045297.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690443 24693094 - MGP_WSBEiJ_P0045297 protein_coding protein_coding MGP_WSBEiJ_T0045298.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690779 24693123 - protein_coding retained_intron MGP_WSBEiJ_T0045299.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690935 24693202 - MGP_WSBEiJ_P0045299 protein_coding protein_coding MGP_WSBEiJ_T0045300.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24690939 24693246 - protein_coding processed_transcript MGP_WSBEiJ_T0045301.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24691065 24693219 - protein_coding processed_transcript MGP_WSBEiJ_T0045302.1 MGP_WSBEiJ_G0022665.1 mouse_genomes_project 17 24692451 24693207 - protein_coding retained_intron MGP_WSBEiJ_T0047689.1 MGP_WSBEiJ_G0023348.1 mouse_genomes_project 17 87300961 87588714 - MGP_WSBEiJ_P0047689 Thada protein_coding protein_coding MGP_WSBEiJ_T0016969.1 MGP_WSBEiJ_G0014766.1 mouse_genomes_project 17 33145285 33160232 + Gm20507 processed_transcript processed_transcript MGP_WSBEiJ_T0096997.1 MGP_WSBEiJ_G0035678.1 mouse_genomes_project 17 81688396 81688515 + n-R5s29 rRNA rRNA MGP_WSBEiJ_T0010015.1 MGP_WSBEiJ_G0008172.1 mouse_genomes_project 17 22743876 22743957 + Gm27700 miRNA miRNA MGP_WSBEiJ_T0045475.1 MGP_WSBEiJ_G0022706.1 mouse_genomes_project 17 26176128 26193145 - MGP_WSBEiJ_P0045475 Lemd2 protein_coding protein_coding MGP_WSBEiJ_T0046259.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34668863 34690037 + MGP_WSBEiJ_P0046259 Ehmt2 protein_coding protein_coding MGP_WSBEiJ_T0046260.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34668893 34690033 + MGP_WSBEiJ_P0046260 Ehmt2 protein_coding protein_coding MGP_WSBEiJ_T0046261.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34670278 34690030 + MGP_WSBEiJ_P0046261 Ehmt2 protein_coding protein_coding MGP_WSBEiJ_T0046262.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34670295 34690037 + MGP_WSBEiJ_P0046262 Ehmt2 protein_coding protein_coding MGP_WSBEiJ_T0046263.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34671018 34676803 + Ehmt2 protein_coding processed_transcript MGP_WSBEiJ_T0046264.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34679377 34680426 + Ehmt2 protein_coding retained_intron MGP_WSBEiJ_T0046265.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34679414 34680215 + Ehmt2 protein_coding retained_intron MGP_WSBEiJ_T0046266.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34680084 34680800 + Ehmt2 protein_coding retained_intron MGP_WSBEiJ_T0046267.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34680176 34682746 + MGP_WSBEiJ_P0046267 Ehmt2 protein_coding protein_coding MGP_WSBEiJ_T0046268.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34680924 34682631 + Ehmt2 protein_coding processed_transcript MGP_WSBEiJ_T0046269.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34681585 34690033 + MGP_WSBEiJ_P0046269 Ehmt2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046270.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34681587 34682990 + MGP_WSBEiJ_P0046270 Ehmt2 protein_coding protein_coding MGP_WSBEiJ_T0046271.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34682832 34686701 + Ehmt2 protein_coding retained_intron MGP_WSBEiJ_T0046272.1 MGP_WSBEiJ_G0022884.1 mouse_genomes_project 17 34686173 34690038 + Ehmt2 protein_coding retained_intron MGP_WSBEiJ_T0099231.1 MGP_WSBEiJ_G0037894.1 mouse_genomes_project 17 10838908 10839046 + Gm26130 snoRNA snoRNA MGP_WSBEiJ_T0045203.1 MGP_WSBEiJ_G0022642.1 mouse_genomes_project 17 24190015 24191560 + MGP_WSBEiJ_P0045203 Tpsb2 protein_coding protein_coding MGP_WSBEiJ_T0044745.1 MGP_WSBEiJ_G0022485.1 mouse_genomes_project 17 15713632 15807203 - MGP_WSBEiJ_P0044745 Lnpep protein_coding protein_coding MGP_WSBEiJ_T0012906.1 MGP_WSBEiJ_G0011036.1 mouse_genomes_project 17 10096554 10097090 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047312.1 MGP_WSBEiJ_G0023211.1 mouse_genomes_project 17 58587087 58641972 - MGP_WSBEiJ_P0047312 Rfx2 protein_coding protein_coding MGP_WSBEiJ_T0047313.1 MGP_WSBEiJ_G0023211.1 mouse_genomes_project 17 58587087 58641972 - MGP_WSBEiJ_P0047313 Rfx2 protein_coding protein_coding MGP_WSBEiJ_T0044600.1 MGP_WSBEiJ_G0022442.1 mouse_genomes_project 17 8045373 8162246 - MGP_WSBEiJ_P0044600 Qk protein_coding protein_coding MGP_WSBEiJ_T0046810.1 MGP_WSBEiJ_G0023060.1 mouse_genomes_project 17 46602694 46616668 + MGP_WSBEiJ_P0046810 Aars2 protein_coding protein_coding MGP_WSBEiJ_T0047712.1 MGP_WSBEiJ_G0023358.1 mouse_genomes_project 17 88792552 88806387 + MGP_WSBEiJ_P0047712 Six3 protein_coding protein_coding MGP_WSBEiJ_T0047713.1 MGP_WSBEiJ_G0023358.1 mouse_genomes_project 17 88801128 88807356 + MGP_WSBEiJ_P0047713 Six3 protein_coding protein_coding MGP_WSBEiJ_T0047714.1 MGP_WSBEiJ_G0023358.1 mouse_genomes_project 17 88802194 88810485 + MGP_WSBEiJ_P0047714 Six3 protein_coding protein_coding MGP_WSBEiJ_T0044787.1 MGP_WSBEiJ_G0022513.1 mouse_genomes_project 17 19157700 19158597 + MGP_WSBEiJ_P0044787 Vmn1r226 protein_coding protein_coding MGP_WSBEiJ_T0047134.1 MGP_WSBEiJ_G0023143.1 mouse_genomes_project 17 49804072 49811792 + MGP_WSBEiJ_P0047134 Oard1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046462.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35631605 35637623 - MGP_WSBEiJ_P0046462 Gtf2h4 protein_coding protein_coding MGP_WSBEiJ_T0046463.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35631613 35632649 - Gtf2h4 protein_coding retained_intron MGP_WSBEiJ_T0046464.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35631614 35633728 - Gtf2h4 protein_coding retained_intron MGP_WSBEiJ_T0046465.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35631616 35637502 - MGP_WSBEiJ_P0046465 Gtf2h4 protein_coding protein_coding MGP_WSBEiJ_T0046466.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35631717 35637587 - MGP_WSBEiJ_P0046466 Gtf2h4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046467.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35634261 35637572 - Gtf2h4 protein_coding retained_intron MGP_WSBEiJ_T0046468.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35634618 35637574 - MGP_WSBEiJ_P0046468 Gtf2h4 protein_coding protein_coding MGP_WSBEiJ_T0046469.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35635219 35637401 - MGP_WSBEiJ_P0046469 Gtf2h4 protein_coding protein_coding MGP_WSBEiJ_T0046470.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35635639 35637565 - Gtf2h4 protein_coding retained_intron MGP_WSBEiJ_T0046471.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35635776 35637182 - Gtf2h4 protein_coding retained_intron MGP_WSBEiJ_T0046472.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35635926 35637443 - Gtf2h4 protein_coding processed_transcript MGP_WSBEiJ_T0046473.1 MGP_WSBEiJ_G0022933.1 mouse_genomes_project 17 35635941 35637543 - MGP_WSBEiJ_P0046473 Gtf2h4 protein_coding protein_coding MGP_WSBEiJ_T0046636.1 MGP_WSBEiJ_G0022968.1 mouse_genomes_project 17 37227639 37234139 - MGP_WSBEiJ_P0046636 Znrd1 protein_coding protein_coding MGP_WSBEiJ_T0046637.1 MGP_WSBEiJ_G0022968.1 mouse_genomes_project 17 37227641 37234190 - MGP_WSBEiJ_P0046637 Znrd1 protein_coding protein_coding MGP_WSBEiJ_T0046638.1 MGP_WSBEiJ_G0022968.1 mouse_genomes_project 17 37227694 37233975 - MGP_WSBEiJ_P0046638 Znrd1 protein_coding protein_coding MGP_WSBEiJ_T0046639.1 MGP_WSBEiJ_G0022968.1 mouse_genomes_project 17 37227726 37234216 - Znrd1 protein_coding processed_transcript MGP_WSBEiJ_T0044622.1 MGP_WSBEiJ_G0022450.1 mouse_genomes_project 17 10555331 10585827 - MGP_WSBEiJ_P0044622 Slc22a1 protein_coding protein_coding MGP_WSBEiJ_T0046370.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931399 34943556 + MGP_WSBEiJ_P0046370 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046371.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931399 34943539 + MGP_WSBEiJ_P0046371 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046372.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931426 34943540 + MGP_WSBEiJ_P0046372 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046373.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931449 34936544 + MGP_WSBEiJ_P0046373 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046374.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931707 34938829 + MGP_WSBEiJ_P0046374 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046375.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931731 34936607 + MGP_WSBEiJ_P0046375 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046376.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931939 34934936 + MGP_WSBEiJ_P0046376 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046377.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931951 34942583 + MGP_WSBEiJ_P0046377 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046378.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34931965 34943554 + MGP_WSBEiJ_P0046378 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046379.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34932346 34935196 + Bag6 protein_coding retained_intron MGP_WSBEiJ_T0046380.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34934803 34936085 + Bag6 protein_coding retained_intron MGP_WSBEiJ_T0046381.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34936465 34937627 + Bag6 protein_coding retained_intron MGP_WSBEiJ_T0046382.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34937393 34938220 + Bag6 protein_coding retained_intron MGP_WSBEiJ_T0046383.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34938210 34938836 + Bag6 protein_coding retained_intron MGP_WSBEiJ_T0046384.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34942121 34943553 + MGP_WSBEiJ_P0046384 Bag6 protein_coding protein_coding MGP_WSBEiJ_T0046385.1 MGP_WSBEiJ_G0022910.1 mouse_genomes_project 17 34942610 34943530 + Bag6 protein_coding retained_intron MGP_WSBEiJ_T0045604.1 MGP_WSBEiJ_G0022732.1 mouse_genomes_project 17 27702393 27710282 + MGP_WSBEiJ_P0045604 Lhfpl5 protein_coding protein_coding MGP_WSBEiJ_T0046424.1 MGP_WSBEiJ_G0022923.1 mouse_genomes_project 17 35448391 35452917 + MGP_WSBEiJ_P0046424 Pou5f1 protein_coding protein_coding MGP_WSBEiJ_T0046425.1 MGP_WSBEiJ_G0022923.1 mouse_genomes_project 17 35449856 35452288 + MGP_WSBEiJ_P0046425 Pou5f1 protein_coding protein_coding MGP_WSBEiJ_T0046426.1 MGP_WSBEiJ_G0022923.1 mouse_genomes_project 17 35450959 35452288 + MGP_WSBEiJ_P0046426 Pou5f1 protein_coding protein_coding MGP_WSBEiJ_T0046427.1 MGP_WSBEiJ_G0022923.1 mouse_genomes_project 17 35450961 35452288 + MGP_WSBEiJ_P0046427 Pou5f1 protein_coding protein_coding MGP_WSBEiJ_T0046428.1 MGP_WSBEiJ_G0022923.1 mouse_genomes_project 17 35450971 35452288 + MGP_WSBEiJ_P0046428 Pou5f1 protein_coding protein_coding MGP_WSBEiJ_T0046429.1 MGP_WSBEiJ_G0022923.1 mouse_genomes_project 17 35450975 35452288 + MGP_WSBEiJ_P0046429 Pou5f1 protein_coding protein_coding MGP_WSBEiJ_T0100608.1 MGP_WSBEiJ_G0039066.1 mouse_genomes_project 17 16714307 16715577 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046945.1 MGP_WSBEiJ_G0023087.1 mouse_genomes_project 17 47590972 47597157 - MGP_WSBEiJ_P0046945 Slc22a7 protein_coding protein_coding MGP_WSBEiJ_T0010063.1 MGP_WSBEiJ_G0008220.1 mouse_genomes_project 17 81679517 81679627 - Gm26377 miRNA miRNA MGP_WSBEiJ_T0046352.1 MGP_WSBEiJ_G0022904.1 mouse_genomes_project 17 34896779 34900459 + MGP_WSBEiJ_P0046352 Ly6g5c protein_coding protein_coding MGP_WSBEiJ_T0044813.1 MGP_WSBEiJ_G0022530.1 mouse_genomes_project 17 20043185 20050358 + MGP_WSBEiJ_P0044813 Zfp52 protein_coding protein_coding MGP_WSBEiJ_T0010019.1 MGP_WSBEiJ_G0008176.1 mouse_genomes_project 17 24068158 24068246 - Mir3547 miRNA miRNA MGP_WSBEiJ_T0003713.1 MGP_WSBEiJ_G0003340.1 mouse_genomes_project 17 89514973 89516991 - 2010106C02Rik antisense antisense MGP_WSBEiJ_T0047420.1 MGP_WSBEiJ_G0023257.1 mouse_genomes_project 17 68337606 68369974 + MGP_WSBEiJ_P0047420 Ddx11 protein_coding protein_coding MGP_WSBEiJ_T0047421.1 MGP_WSBEiJ_G0023257.1 mouse_genomes_project 17 68337767 68370061 + MGP_WSBEiJ_P0047421 Ddx11 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046136.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34275080 34300781 + MGP_WSBEiJ_P0046136 Notch4 protein_coding protein_coding MGP_WSBEiJ_T0046137.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34275110 34276429 + Notch4 protein_coding processed_transcript MGP_WSBEiJ_T0046138.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34275149 34300506 + MGP_WSBEiJ_P0046138 Notch4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046139.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34275948 34276390 + Notch4 protein_coding retained_intron MGP_WSBEiJ_T0046140.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34288872 34294769 + Notch4 protein_coding processed_transcript MGP_WSBEiJ_T0046141.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34296171 34298911 + MGP_WSBEiJ_P0046141 Notch4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046142.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34296171 34298963 + MGP_WSBEiJ_P0046142 Notch4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046143.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34296857 34297944 + Notch4 protein_coding retained_intron MGP_WSBEiJ_T0046144.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34297956 34298912 + Notch4 protein_coding retained_intron MGP_WSBEiJ_T0046145.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34298564 34299748 + Notch4 protein_coding retained_intron MGP_WSBEiJ_T0046146.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34299233 34299776 + Notch4 protein_coding processed_transcript MGP_WSBEiJ_T0046147.1 MGP_WSBEiJ_G0022863.1 mouse_genomes_project 17 34299329 34300093 + Notch4 protein_coding processed_transcript MGP_WSBEiJ_T0047593.1 MGP_WSBEiJ_G0023304.1 mouse_genomes_project 17 78168782 78271113 + MGP_WSBEiJ_P0047593 Rasgrp3 protein_coding protein_coding MGP_WSBEiJ_T0047594.1 MGP_WSBEiJ_G0023304.1 mouse_genomes_project 17 78201740 78271113 + MGP_WSBEiJ_P0047594 Rasgrp3 protein_coding protein_coding MGP_WSBEiJ_T0047730.1 MGP_WSBEiJ_G0023367.1 mouse_genomes_project 17 90274497 90301363 - MGP_WSBEiJ_P0047730 Pigf protein_coding protein_coding MGP_WSBEiJ_T0046999.1 MGP_WSBEiJ_G0023111.1 mouse_genomes_project 17 48159424 48244423 - MGP_WSBEiJ_P0046999 Ubr2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047000.1 MGP_WSBEiJ_G0023111.1 mouse_genomes_project 17 48159427 48244736 - MGP_WSBEiJ_P0047000 Ubr2 protein_coding protein_coding MGP_WSBEiJ_T0047001.1 MGP_WSBEiJ_G0023111.1 mouse_genomes_project 17 48159427 48244736 - MGP_WSBEiJ_P0047001 Ubr2 protein_coding protein_coding MGP_WSBEiJ_T0003644.1 MGP_WSBEiJ_G0003287.1 mouse_genomes_project 17 11774681 11775297 - Gm16052 antisense antisense MGP_WSBEiJ_T0044484.1 MGP_WSBEiJ_G0022408.1 mouse_genomes_project 17 2981751 3071183 + MGP_WSBEiJ_P0044484 Snx9 protein_coding protein_coding MGP_WSBEiJ_T0098014.1 MGP_WSBEiJ_G0036677.1 mouse_genomes_project 17 83013784 83013890 + Gm23125 snRNA snRNA MGP_WSBEiJ_T0000956.1 MGP_WSBEiJ_G0000891.1 mouse_genomes_project 17 53299342 53302489 - TEC TEC MGP_WSBEiJ_T0047404.1 MGP_WSBEiJ_G0023252.1 mouse_genomes_project 17 68055658 68094347 - MGP_WSBEiJ_P0047404 Ralbp1 protein_coding protein_coding MGP_WSBEiJ_T0047405.1 MGP_WSBEiJ_G0023252.1 mouse_genomes_project 17 68055658 68093515 - MGP_WSBEiJ_P0047405 Ralbp1 protein_coding protein_coding MGP_WSBEiJ_T0046502.1 MGP_WSBEiJ_G0022938.1 mouse_genomes_project 17 35811415 35830919 + MGP_WSBEiJ_P0046502 Mdc1 protein_coding protein_coding MGP_WSBEiJ_T0046503.1 MGP_WSBEiJ_G0022938.1 mouse_genomes_project 17 35811576 35817150 + MGP_WSBEiJ_P0046503 Mdc1 protein_coding protein_coding MGP_WSBEiJ_T0046504.1 MGP_WSBEiJ_G0022938.1 mouse_genomes_project 17 35811584 35830925 + MGP_WSBEiJ_P0046504 Mdc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047299.1 MGP_WSBEiJ_G0023201.1 mouse_genomes_project 17 58392332 58395032 - MGP_WSBEiJ_P0047299 2410015M20Rik protein_coding protein_coding MGP_WSBEiJ_T0012976.1 MGP_WSBEiJ_G0011106.1 mouse_genomes_project 17 88778434 88778774 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100644.1 MGP_WSBEiJ_G0039102.1 mouse_genomes_project 17 36177898 36178131 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046443.1 MGP_WSBEiJ_G0022928.1 mouse_genomes_project 17 35518050 35519553 + MGP_WSBEiJ_P0046443 2300002M23Rik protein_coding protein_coding MGP_WSBEiJ_T0046444.1 MGP_WSBEiJ_G0022928.1 mouse_genomes_project 17 35518085 35519531 + 2300002M23Rik protein_coding retained_intron MGP_WSBEiJ_T0047218.1 MGP_WSBEiJ_G0023176.1 mouse_genomes_project 17 57728159 57738457 + MGP_WSBEiJ_P0047218 Fsd1 protein_coding protein_coding MGP_WSBEiJ_T0044776.1 MGP_WSBEiJ_G0022502.1 mouse_genomes_project 17 17908937 17935637 + MGP_WSBEiJ_P0044776 Vmn2r100 protein_coding protein_coding MGP_WSBEiJ_T0046107.1 MGP_WSBEiJ_G0022853.1 mouse_genomes_project 17 33832778 33839801 + MGP_WSBEiJ_P0046107 H2-Ob protein_coding protein_coding MGP_WSBEiJ_T0046108.1 MGP_WSBEiJ_G0022853.1 mouse_genomes_project 17 33832780 33835430 + H2-Ob protein_coding retained_intron MGP_WSBEiJ_T0046109.1 MGP_WSBEiJ_G0022853.1 mouse_genomes_project 17 33832806 33839692 + MGP_WSBEiJ_P0046109 H2-Ob protein_coding protein_coding MGP_WSBEiJ_T0046110.1 MGP_WSBEiJ_G0022853.1 mouse_genomes_project 17 33833945 33838299 + MGP_WSBEiJ_P0046110 H2-Ob protein_coding protein_coding MGP_WSBEiJ_T0047371.1 MGP_WSBEiJ_G0023241.1 mouse_genomes_project 17 65140310 65587663 - MGP_WSBEiJ_P0047371 Fbxl17 protein_coding protein_coding MGP_WSBEiJ_T0047372.1 MGP_WSBEiJ_G0023241.1 mouse_genomes_project 17 65143140 65542004 - Fbxl17 protein_coding processed_transcript MGP_WSBEiJ_T0047373.1 MGP_WSBEiJ_G0023241.1 mouse_genomes_project 17 65144296 65537549 - Fbxl17 protein_coding processed_transcript MGP_WSBEiJ_T0047374.1 MGP_WSBEiJ_G0023241.1 mouse_genomes_project 17 65465912 65569268 - Fbxl17 protein_coding processed_transcript MGP_WSBEiJ_T0044550.1 MGP_WSBEiJ_G0022427.1 mouse_genomes_project 17 5540551 5614418 - MGP_WSBEiJ_P0044550 Gm1604b protein_coding protein_coding MGP_WSBEiJ_T0044826.1 MGP_WSBEiJ_G0022539.1 mouse_genomes_project 17 20461590 20502339 - MGP_WSBEiJ_P0044826 Zfp942 protein_coding protein_coding MGP_WSBEiJ_T0011611.1 MGP_WSBEiJ_G0009759.1 mouse_genomes_project 17 22223473 22226851 - MGP_WSBEiJ_P0011611 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0011612.1 MGP_WSBEiJ_G0009759.1 mouse_genomes_project 17 22223577 22226781 - MGP_WSBEiJ_P0011612 polymorphic_pseudogene protein_coding MGP_WSBEiJ_T0010046.1 MGP_WSBEiJ_G0008203.1 mouse_genomes_project 17 35839388 35839484 - Gm28033 miRNA miRNA MGP_WSBEiJ_T0047672.1 MGP_WSBEiJ_G0023343.1 mouse_genomes_project 17 86396051 86528311 + MGP_WSBEiJ_P0047672 Eml4 protein_coding protein_coding MGP_WSBEiJ_T0047673.1 MGP_WSBEiJ_G0023343.1 mouse_genomes_project 17 86396051 86528311 + MGP_WSBEiJ_P0047673 Eml4 protein_coding protein_coding MGP_WSBEiJ_T0047674.1 MGP_WSBEiJ_G0023343.1 mouse_genomes_project 17 86396051 86528311 + MGP_WSBEiJ_P0047674 Eml4 protein_coding protein_coding MGP_WSBEiJ_T0012946.1 MGP_WSBEiJ_G0011076.1 mouse_genomes_project 17 38503831 38504693 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097997.1 MGP_WSBEiJ_G0036660.1 mouse_genomes_project 17 37615190 37615353 - Gm25104 snRNA snRNA MGP_WSBEiJ_T0099235.1 MGP_WSBEiJ_G0037898.1 mouse_genomes_project 17 23519838 23519966 - Snora78 snoRNA snoRNA MGP_WSBEiJ_T0006864.1 MGP_WSBEiJ_G0005652.1 mouse_genomes_project 17 53724184 53738754 + Gm19585 lincRNA lincRNA MGP_WSBEiJ_T0006865.1 MGP_WSBEiJ_G0005652.1 mouse_genomes_project 17 53735862 53738549 + Gm19585 lincRNA lincRNA MGP_WSBEiJ_T0047727.1 MGP_WSBEiJ_G0023365.1 mouse_genomes_project 17 90221736 90225506 - MGP_WSBEiJ_P0047727 Atp6v1e2 protein_coding protein_coding MGP_WSBEiJ_T0045752.1 MGP_WSBEiJ_G0022771.1 mouse_genomes_project 17 30488383 30506865 - MGP_WSBEiJ_P0045752 Tmprss3 protein_coding protein_coding MGP_WSBEiJ_T0045753.1 MGP_WSBEiJ_G0022771.1 mouse_genomes_project 17 30488383 30508091 - MGP_WSBEiJ_P0045753 Tmprss3 protein_coding protein_coding MGP_WSBEiJ_T0016958.1 MGP_WSBEiJ_G0014761.1 mouse_genomes_project 17 23173489 23184743 - D330041H03Rik processed_transcript antisense MGP_WSBEiJ_T0016959.1 MGP_WSBEiJ_G0014761.1 mouse_genomes_project 17 23178371 23184827 - D330041H03Rik processed_transcript antisense MGP_WSBEiJ_T0016960.1 MGP_WSBEiJ_G0014761.1 mouse_genomes_project 17 23178387 23184721 - D330041H03Rik processed_transcript antisense MGP_WSBEiJ_T0016961.1 MGP_WSBEiJ_G0014761.1 mouse_genomes_project 17 23181090 23183946 - D330041H03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0016962.1 MGP_WSBEiJ_G0014761.1 mouse_genomes_project 17 23181098 23184846 - D330041H03Rik processed_transcript antisense MGP_WSBEiJ_T0016963.1 MGP_WSBEiJ_G0014761.1 mouse_genomes_project 17 23182739 23184741 - D330041H03Rik processed_transcript retained_intron MGP_WSBEiJ_T0016964.1 MGP_WSBEiJ_G0014761.1 mouse_genomes_project 17 23182814 23184713 - D330041H03Rik processed_transcript antisense MGP_WSBEiJ_T0047326.1 MGP_WSBEiJ_G0023221.1 mouse_genomes_project 17 58858374 58867147 - MGP_WSBEiJ_P0047326 Slc25a41 protein_coding protein_coding MGP_WSBEiJ_T0047327.1 MGP_WSBEiJ_G0023221.1 mouse_genomes_project 17 58858526 58867140 - MGP_WSBEiJ_P0047327 Slc25a41 protein_coding protein_coding MGP_WSBEiJ_T0044509.1 MGP_WSBEiJ_G0022412.1 mouse_genomes_project 17 3264856 3296925 + Tulp4 protein_coding processed_transcript MGP_WSBEiJ_T0044510.1 MGP_WSBEiJ_G0022412.1 mouse_genomes_project 17 3264898 3368201 + MGP_WSBEiJ_P0044510 Tulp4 protein_coding protein_coding MGP_WSBEiJ_T0044511.1 MGP_WSBEiJ_G0022412.1 mouse_genomes_project 17 3281341 3283923 + Tulp4 protein_coding processed_transcript MGP_WSBEiJ_T0044512.1 MGP_WSBEiJ_G0022412.1 mouse_genomes_project 17 3295343 3296922 + Tulp4 protein_coding processed_transcript MGP_WSBEiJ_T0044513.1 MGP_WSBEiJ_G0022412.1 mouse_genomes_project 17 3296280 3893614 + Tulp4 protein_coding retained_intron MGP_WSBEiJ_T0044514.1 MGP_WSBEiJ_G0022412.1 mouse_genomes_project 17 3296280 3909782 + MGP_WSBEiJ_P0044514 Tulp4 protein_coding protein_coding MGP_WSBEiJ_T0044515.1 MGP_WSBEiJ_G0022412.1 mouse_genomes_project 17 3336118 3467915 + MGP_WSBEiJ_P0044515 Tulp4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044516.1 MGP_WSBEiJ_G0022412.1 mouse_genomes_project 17 3336118 3909782 + MGP_WSBEiJ_P0044516 Tulp4 protein_coding protein_coding MGP_WSBEiJ_T0046683.1 MGP_WSBEiJ_G0022982.1 mouse_genomes_project 17 37549400 37611883 - MGP_WSBEiJ_P0046683 protein_coding protein_coding MGP_WSBEiJ_T0046738.1 MGP_WSBEiJ_G0023028.1 mouse_genomes_project 17 41467202 41472064 + MGP_WSBEiJ_P0046738 Esp6 protein_coding protein_coding MGP_WSBEiJ_T0045986.1 MGP_WSBEiJ_G0022828.1 mouse_genomes_project 17 33415228 33419264 - protein_coding retained_intron MGP_WSBEiJ_T0046789.1 MGP_WSBEiJ_G0023055.1 mouse_genomes_project 17 45216476 45321471 + MGP_WSBEiJ_P0046789 Clic5 protein_coding protein_coding MGP_WSBEiJ_T0044804.1 MGP_WSBEiJ_G0022524.1 mouse_genomes_project 17 19774004 19775125 + MGP_WSBEiJ_P0044804 Vmn1r236 protein_coding protein_coding MGP_WSBEiJ_T0047325.1 MGP_WSBEiJ_G0023220.1 mouse_genomes_project 17 58843594 58857109 - MGP_WSBEiJ_P0047325 Khsrp protein_coding protein_coding MGP_WSBEiJ_T0046522.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35867709 35871929 - MGP_WSBEiJ_P0046522 2310061I04Rik protein_coding protein_coding MGP_WSBEiJ_T0046523.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35867709 35872239 - MGP_WSBEiJ_P0046523 2310061I04Rik protein_coding protein_coding MGP_WSBEiJ_T0046524.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35867715 35870125 - MGP_WSBEiJ_P0046524 2310061I04Rik protein_coding protein_coding MGP_WSBEiJ_T0046525.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35867719 35871920 - MGP_WSBEiJ_P0046525 2310061I04Rik protein_coding protein_coding MGP_WSBEiJ_T0046526.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35867863 35870732 - MGP_WSBEiJ_P0046526 2310061I04Rik protein_coding protein_coding MGP_WSBEiJ_T0046527.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35869855 35871882 - MGP_WSBEiJ_P0046527 2310061I04Rik protein_coding protein_coding MGP_WSBEiJ_T0046528.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35870582 35871417 - 2310061I04Rik protein_coding processed_transcript MGP_WSBEiJ_T0046529.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35870731 35871912 - MGP_WSBEiJ_P0046529 2310061I04Rik protein_coding protein_coding MGP_WSBEiJ_T0046530.1 MGP_WSBEiJ_G0022942.1 mouse_genomes_project 17 35871084 35872121 - 2310061I04Rik protein_coding processed_transcript MGP_WSBEiJ_T0047560.1 MGP_WSBEiJ_G0023299.1 mouse_genomes_project 17 77117305 77152279 - MGP_WSBEiJ_P0047560 Nlrc4 protein_coding protein_coding MGP_WSBEiJ_T0003711.1 MGP_WSBEiJ_G0003338.1 mouse_genomes_project 17 74272961 74273930 - Gm15641 antisense antisense MGP_WSBEiJ_T0045747.1 MGP_WSBEiJ_G0022767.1 mouse_genomes_project 17 30360175 30421943 + MGP_WSBEiJ_P0045747 Abcg1 protein_coding protein_coding MGP_WSBEiJ_T0045748.1 MGP_WSBEiJ_G0022767.1 mouse_genomes_project 17 30360251 30404925 + Abcg1 protein_coding retained_intron MGP_WSBEiJ_T0100624.1 MGP_WSBEiJ_G0039082.1 mouse_genomes_project 17 19808357 19810366 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045582.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27452836 27456390 - Tulp1 protein_coding retained_intron MGP_WSBEiJ_T0045583.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27452836 27466308 - MGP_WSBEiJ_P0045583 Tulp1 protein_coding protein_coding MGP_WSBEiJ_T0045584.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27452837 27459960 - MGP_WSBEiJ_P0045584 Tulp1 protein_coding protein_coding MGP_WSBEiJ_T0045585.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27453175 27459928 - MGP_WSBEiJ_P0045585 Tulp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045586.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27453851 27464085 - Tulp1 protein_coding retained_intron MGP_WSBEiJ_T0045587.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27453859 27457704 - Tulp1 protein_coding retained_intron MGP_WSBEiJ_T0045588.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27454383 27460387 - MGP_WSBEiJ_P0045588 Tulp1 protein_coding protein_coding MGP_WSBEiJ_T0045589.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27457144 27466342 - MGP_WSBEiJ_P0045589 Tulp1 protein_coding protein_coding MGP_WSBEiJ_T0045590.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27459715 27463597 - Tulp1 protein_coding retained_intron MGP_WSBEiJ_T0045591.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27462816 27464122 - Tulp1 protein_coding retained_intron MGP_WSBEiJ_T0045592.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27463859 27466306 - Tulp1 protein_coding retained_intron MGP_WSBEiJ_T0045593.1 MGP_WSBEiJ_G0022727.1 mouse_genomes_project 17 27464845 27466299 - Tulp1 protein_coding retained_intron MGP_WSBEiJ_T0047201.1 MGP_WSBEiJ_G0023163.1 mouse_genomes_project 17 55693466 55722041 - MGP_WSBEiJ_P0047201 Sult1c1 protein_coding protein_coding MGP_WSBEiJ_T0047718.1 MGP_WSBEiJ_G0023361.1 mouse_genomes_project 17 89389891 89915073 + MGP_WSBEiJ_P0047718 Prkce protein_coding protein_coding MGP_WSBEiJ_T0047719.1 MGP_WSBEiJ_G0023361.1 mouse_genomes_project 17 89389925 89400519 + MGP_WSBEiJ_P0047719 Prkce protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047720.1 MGP_WSBEiJ_G0023361.1 mouse_genomes_project 17 89390280 89912578 + MGP_WSBEiJ_P0047720 Prkce protein_coding protein_coding MGP_WSBEiJ_T0047721.1 MGP_WSBEiJ_G0023361.1 mouse_genomes_project 17 89735648 89741202 + Prkce protein_coding retained_intron MGP_WSBEiJ_T0047722.1 MGP_WSBEiJ_G0023361.1 mouse_genomes_project 17 89738409 89741547 + Prkce protein_coding retained_intron MGP_WSBEiJ_T0046082.1 MGP_WSBEiJ_G0022845.1 mouse_genomes_project 17 33695854 33711722 + MGP_WSBEiJ_P0046082 H2-DMa protein_coding unknown_likely_coding MGP_WSBEiJ_T0046083.1 MGP_WSBEiJ_G0022845.1 mouse_genomes_project 17 33709927 33711081 + H2-DMa protein_coding retained_intron MGP_WSBEiJ_T0046691.1 MGP_WSBEiJ_G0022989.1 mouse_genomes_project 17 37824790 37825735 + MGP_WSBEiJ_P0046691 Olfr109 protein_coding protein_coding MGP_WSBEiJ_T0044555.1 MGP_WSBEiJ_G0022431.1 mouse_genomes_project 17 5691015 5942644 + MGP_WSBEiJ_P0044555 Fgfr1op protein_coding protein_coding MGP_WSBEiJ_T0044556.1 MGP_WSBEiJ_G0022431.1 mouse_genomes_project 17 5691034 5922214 + Fgfr1op protein_coding retained_intron MGP_WSBEiJ_T0044557.1 MGP_WSBEiJ_G0022431.1 mouse_genomes_project 17 5691054 5942315 + MGP_WSBEiJ_P0044557 Fgfr1op protein_coding protein_coding MGP_WSBEiJ_T0044558.1 MGP_WSBEiJ_G0022431.1 mouse_genomes_project 17 5928360 5940786 + MGP_WSBEiJ_P0044558 Fgfr1op protein_coding protein_coding MGP_WSBEiJ_T0047499.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73691154 73745496 + Lpin2 protein_coding retained_intron MGP_WSBEiJ_T0047500.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73692150 73742675 + MGP_WSBEiJ_P0047500 Lpin2 protein_coding protein_coding MGP_WSBEiJ_T0047501.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73692317 73732173 + Lpin2 protein_coding retained_intron MGP_WSBEiJ_T0047502.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73714316 73741874 + MGP_WSBEiJ_P0047502 Lpin2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047503.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73714438 73760248 + MGP_WSBEiJ_P0047503 Lpin2 protein_coding protein_coding MGP_WSBEiJ_T0047504.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73741801 73748464 + Lpin2 protein_coding retained_intron MGP_WSBEiJ_T0047505.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73749042 73749781 + Lpin2 protein_coding retained_intron MGP_WSBEiJ_T0047506.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73749052 73756862 + MGP_WSBEiJ_P0047506 Lpin2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047507.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73751012 73755237 + Lpin2 protein_coding retained_intron MGP_WSBEiJ_T0047508.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73751113 73753890 + Lpin2 protein_coding retained_intron MGP_WSBEiJ_T0047509.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73752806 73756316 + Lpin2 protein_coding retained_intron MGP_WSBEiJ_T0047510.1 MGP_WSBEiJ_G0023276.1 mouse_genomes_project 17 73756439 73757738 + Lpin2 protein_coding retained_intron MGP_WSBEiJ_T0047375.1 MGP_WSBEiJ_G0023242.1 mouse_genomes_project 17 65973073 65973565 - MGP_WSBEiJ_P0047375 A930002H24Rik protein_coding protein_coding MGP_WSBEiJ_T0046589.1 MGP_WSBEiJ_G0022953.1 mouse_genomes_project 17 36027886 36039714 + MGP_WSBEiJ_P0046589 protein_coding protein_coding MGP_WSBEiJ_T0045000.1 MGP_WSBEiJ_G0022594.1 mouse_genomes_project 17 23265137 23286663 + MGP_WSBEiJ_P0045000 Caskin1 protein_coding protein_coding MGP_WSBEiJ_T0045833.1 MGP_WSBEiJ_G0022788.1 mouse_genomes_project 17 31702445 31721269 - MGP_WSBEiJ_P0045833 Akap8 protein_coding protein_coding MGP_WSBEiJ_T0045760.1 MGP_WSBEiJ_G0022774.1 mouse_genomes_project 17 30619509 30677954 + MGP_WSBEiJ_P0045760 Slc37a1 protein_coding protein_coding MGP_WSBEiJ_T0045761.1 MGP_WSBEiJ_G0022774.1 mouse_genomes_project 17 30620245 30677954 + MGP_WSBEiJ_P0045761 Slc37a1 protein_coding protein_coding MGP_WSBEiJ_T0046148.1 MGP_WSBEiJ_G0022864.1 mouse_genomes_project 17 34302086 34304037 + MGP_WSBEiJ_P0046148 Gpsm3 protein_coding protein_coding MGP_WSBEiJ_T0046149.1 MGP_WSBEiJ_G0022864.1 mouse_genomes_project 17 34302372 34304037 + MGP_WSBEiJ_P0046149 Gpsm3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046150.1 MGP_WSBEiJ_G0022864.1 mouse_genomes_project 17 34302511 34303923 + MGP_WSBEiJ_P0046150 Gpsm3 protein_coding protein_coding MGP_WSBEiJ_T0045624.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27942998 27985133 + MGP_WSBEiJ_P0045624 Brpf3 protein_coding protein_coding MGP_WSBEiJ_T0045625.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27943692 27948380 + Brpf3 protein_coding processed_transcript MGP_WSBEiJ_T0045626.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27952848 27962683 + Brpf3 protein_coding processed_transcript MGP_WSBEiJ_T0045627.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27953740 27985080 + Brpf3 protein_coding retained_intron MGP_WSBEiJ_T0045628.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27958741 27963069 + Brpf3 protein_coding retained_intron MGP_WSBEiJ_T0045629.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27958894 27963307 + Brpf3 protein_coding processed_transcript MGP_WSBEiJ_T0045630.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27969224 27983285 + Brpf3 protein_coding processed_transcript MGP_WSBEiJ_T0045631.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27970179 27983323 + Brpf3 protein_coding processed_transcript MGP_WSBEiJ_T0045632.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27970259 27985128 + Brpf3 protein_coding processed_transcript MGP_WSBEiJ_T0045633.1 MGP_WSBEiJ_G0022737.1 mouse_genomes_project 17 27974667 27983378 + Brpf3 protein_coding processed_transcript MGP_WSBEiJ_T0046885.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47305297 47313636 + MGP_WSBEiJ_P0046885 Gtpbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046886.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47305297 47313638 + MGP_WSBEiJ_P0046886 Gtpbp2 protein_coding protein_coding MGP_WSBEiJ_T0046887.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47305314 47307771 + Gtpbp2 protein_coding processed_transcript MGP_WSBEiJ_T0046888.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47305331 47313604 + MGP_WSBEiJ_P0046888 Gtpbp2 protein_coding protein_coding MGP_WSBEiJ_T0046889.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47305376 47308575 + MGP_WSBEiJ_P0046889 Gtpbp2 protein_coding protein_coding MGP_WSBEiJ_T0046890.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47305426 47306424 + Gtpbp2 protein_coding processed_transcript MGP_WSBEiJ_T0046891.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47305560 47309018 + Gtpbp2 protein_coding processed_transcript MGP_WSBEiJ_T0046892.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47307298 47309089 + Gtpbp2 protein_coding retained_intron MGP_WSBEiJ_T0046893.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47307491 47310063 + Gtpbp2 protein_coding processed_transcript MGP_WSBEiJ_T0046894.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47307583 47309456 + Gtpbp2 protein_coding retained_intron MGP_WSBEiJ_T0046895.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47309963 47312150 + Gtpbp2 protein_coding retained_intron MGP_WSBEiJ_T0046896.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47310045 47311600 + Gtpbp2 protein_coding retained_intron MGP_WSBEiJ_T0046897.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47310698 47312502 + MGP_WSBEiJ_P0046897 Gtpbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046898.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47311134 47312289 + Gtpbp2 protein_coding retained_intron MGP_WSBEiJ_T0046899.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47311255 47312479 + Gtpbp2 protein_coding retained_intron MGP_WSBEiJ_T0046900.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47311498 47312662 + MGP_WSBEiJ_P0046900 Gtpbp2 protein_coding protein_coding MGP_WSBEiJ_T0046901.1 MGP_WSBEiJ_G0023076.1 mouse_genomes_project 17 47311903 47312678 + Gtpbp2 protein_coding retained_intron MGP_WSBEiJ_T0045523.1 MGP_WSBEiJ_G0022718.1 mouse_genomes_project 17 26971063 27126600 + MGP_WSBEiJ_P0045523 Anks1 protein_coding protein_coding MGP_WSBEiJ_T0045524.1 MGP_WSBEiJ_G0022718.1 mouse_genomes_project 17 26971095 27126597 + MGP_WSBEiJ_P0045524 Anks1 protein_coding protein_coding MGP_WSBEiJ_T0045525.1 MGP_WSBEiJ_G0022718.1 mouse_genomes_project 17 26971095 27126597 + MGP_WSBEiJ_P0045525 Anks1 protein_coding protein_coding MGP_WSBEiJ_T0045526.1 MGP_WSBEiJ_G0022718.1 mouse_genomes_project 17 27070275 27126599 + Anks1 protein_coding processed_transcript MGP_WSBEiJ_T0012965.1 MGP_WSBEiJ_G0011095.1 mouse_genomes_project 17 70727446 70727977 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006820.1 MGP_WSBEiJ_G0005620.1 mouse_genomes_project 17 27643809 27645900 + E230001N04Rik lincRNA lincRNA MGP_WSBEiJ_T0006821.1 MGP_WSBEiJ_G0005620.1 mouse_genomes_project 17 27643845 27645900 + E230001N04Rik lincRNA lincRNA MGP_WSBEiJ_T0047385.1 MGP_WSBEiJ_G0023246.1 mouse_genomes_project 17 67010008 67013575 - MGP_WSBEiJ_P0047385 4930583I09Rik protein_coding protein_coding MGP_WSBEiJ_T0047244.1 MGP_WSBEiJ_G0023186.1 mouse_genomes_project 17 57874706 57891955 - MGP_WSBEiJ_P0047244 Sema6b protein_coding protein_coding MGP_WSBEiJ_T0047245.1 MGP_WSBEiJ_G0023186.1 mouse_genomes_project 17 57874706 57885465 - MGP_WSBEiJ_P0047245 Sema6b protein_coding protein_coding MGP_WSBEiJ_T0100635.1 MGP_WSBEiJ_G0039093.1 mouse_genomes_project 17 34136148 34136501 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006819.1 MGP_WSBEiJ_G0005619.1 mouse_genomes_project 17 27642933 27643701 - Gm20109 lincRNA lincRNA MGP_WSBEiJ_T0006842.1 MGP_WSBEiJ_G0005636.1 mouse_genomes_project 17 34360640 34363772 - Gm20461 lincRNA lincRNA MGP_WSBEiJ_T0044520.1 MGP_WSBEiJ_G0022414.1 mouse_genomes_project 17 3809562 3816658 - MGP_WSBEiJ_P0044520 protein_coding protein_coding MGP_WSBEiJ_T0012978.1 MGP_WSBEiJ_G0011108.1 mouse_genomes_project 17 94040216 94040551 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045266.1 MGP_WSBEiJ_G0022658.1 mouse_genomes_project 17 24643232 24645714 - MGP_WSBEiJ_P0045266 Metrn protein_coding protein_coding MGP_WSBEiJ_T0045267.1 MGP_WSBEiJ_G0022658.1 mouse_genomes_project 17 24643611 24645805 - MGP_WSBEiJ_P0045267 Metrn protein_coding protein_coding MGP_WSBEiJ_T0046200.1 MGP_WSBEiJ_G0022873.1 mouse_genomes_project 17 34366940 34374867 + MGP_WSBEiJ_P0046200 Atf6b protein_coding protein_coding MGP_WSBEiJ_T0046201.1 MGP_WSBEiJ_G0022873.1 mouse_genomes_project 17 34366995 34368942 + MGP_WSBEiJ_P0046201 Atf6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046202.1 MGP_WSBEiJ_G0022873.1 mouse_genomes_project 17 34366995 34368997 + MGP_WSBEiJ_P0046202 Atf6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046203.1 MGP_WSBEiJ_G0022873.1 mouse_genomes_project 17 34367005 34374672 + MGP_WSBEiJ_P0046203 Atf6b protein_coding protein_coding MGP_WSBEiJ_T0046204.1 MGP_WSBEiJ_G0022873.1 mouse_genomes_project 17 34371421 34371898 + Atf6b protein_coding retained_intron MGP_WSBEiJ_T0044928.1 MGP_WSBEiJ_G0022575.1 mouse_genomes_project 17 22757425 22757749 + MGP_WSBEiJ_P0044928 Gm5225 protein_coding protein_coding MGP_WSBEiJ_T0045865.1 MGP_WSBEiJ_G0022797.1 mouse_genomes_project 17 32147922 32166897 + MGP_WSBEiJ_P0045865 Cyp4f15 protein_coding protein_coding MGP_WSBEiJ_T0045866.1 MGP_WSBEiJ_G0022797.1 mouse_genomes_project 17 32147963 32154564 + Cyp4f15 protein_coding retained_intron MGP_WSBEiJ_T0045867.1 MGP_WSBEiJ_G0022797.1 mouse_genomes_project 17 32147966 32161441 + Cyp4f15 protein_coding processed_transcript MGP_WSBEiJ_T0045868.1 MGP_WSBEiJ_G0022797.1 mouse_genomes_project 17 32147974 32166897 + MGP_WSBEiJ_P0045868 Cyp4f15 protein_coding protein_coding MGP_WSBEiJ_T0006851.1 MGP_WSBEiJ_G0005645.1 mouse_genomes_project 17 46523195 46531642 + B230354K17Rik lincRNA lincRNA MGP_WSBEiJ_T0047658.1 MGP_WSBEiJ_G0023336.1 mouse_genomes_project 17 83538713 83696434 - MGP_WSBEiJ_P0047658 Map4k3 protein_coding protein_coding MGP_WSBEiJ_T0047659.1 MGP_WSBEiJ_G0023336.1 mouse_genomes_project 17 83538713 83696434 - MGP_WSBEiJ_P0047659 Map4k3 protein_coding protein_coding MGP_WSBEiJ_T0044747.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16033574 16035297 + Spaca6 protein_coding processed_transcript MGP_WSBEiJ_T0044748.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16033748 16034930 + Spaca6 protein_coding retained_intron MGP_WSBEiJ_T0044749.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16033859 16041984 + MGP_WSBEiJ_P0044749 Spaca6 protein_coding protein_coding MGP_WSBEiJ_T0044750.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16033919 16045922 + MGP_WSBEiJ_P0044750 Spaca6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044751.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16034035 16041421 + Spaca6 protein_coding processed_transcript MGP_WSBEiJ_T0044752.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16034035 16041421 + Spaca6 protein_coding retained_intron MGP_WSBEiJ_T0044753.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16034299 16040635 + MGP_WSBEiJ_P0044753 Spaca6 protein_coding protein_coding MGP_WSBEiJ_T0044754.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16034898 16039065 + Spaca6 protein_coding retained_intron MGP_WSBEiJ_T0044755.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16035823 16039937 + Spaca6 protein_coding retained_intron MGP_WSBEiJ_T0044756.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16038860 16041434 + Spaca6 protein_coding retained_intron MGP_WSBEiJ_T0044757.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16040415 16041984 + Spaca6 protein_coding retained_intron MGP_WSBEiJ_T0044758.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16040605 16041980 + MGP_WSBEiJ_P0044758 Spaca6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044759.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16041192 16041984 + Spaca6 protein_coding retained_intron MGP_WSBEiJ_T0044760.1 MGP_WSBEiJ_G0022487.1 mouse_genomes_project 17 16041484 16041984 + Spaca6 protein_coding retained_intron MGP_WSBEiJ_T0047768.1 MGP_WSBEiJ_G0023379.1 mouse_genomes_project 17 91331463 91372660 - MGP_WSBEiJ_P0047768 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047769.1 MGP_WSBEiJ_G0023379.1 mouse_genomes_project 17 91332028 91352291 - MGP_WSBEiJ_P0047769 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047770.1 MGP_WSBEiJ_G0023379.1 mouse_genomes_project 17 91333823 91341598 - protein_coding retained_intron MGP_WSBEiJ_T0047305.1 MGP_WSBEiJ_G0023206.1 mouse_genomes_project 17 58513703 58519123 - MGP_WSBEiJ_P0047305 Vmac protein_coding protein_coding MGP_WSBEiJ_T0047306.1 MGP_WSBEiJ_G0023206.1 mouse_genomes_project 17 58513703 58516768 - MGP_WSBEiJ_P0047306 Vmac protein_coding protein_coding MGP_WSBEiJ_T0100604.1 MGP_WSBEiJ_G0039062.1 mouse_genomes_project 17 16332729 17521655 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046400.1 MGP_WSBEiJ_G0022914.1 mouse_genomes_project 17 34995909 34997773 + MGP_WSBEiJ_P0046400 Ltb protein_coding protein_coding MGP_WSBEiJ_T0046401.1 MGP_WSBEiJ_G0022914.1 mouse_genomes_project 17 34995993 34997776 + Ltb protein_coding retained_intron MGP_WSBEiJ_T0046402.1 MGP_WSBEiJ_G0022914.1 mouse_genomes_project 17 34996096 34997791 + MGP_WSBEiJ_P0046402 Ltb protein_coding protein_coding MGP_WSBEiJ_T0047688.1 MGP_WSBEiJ_G0023347.1 mouse_genomes_project 17 86910141 86928438 - MGP_WSBEiJ_P0047688 Haao protein_coding protein_coding MGP_WSBEiJ_T0010054.1 MGP_WSBEiJ_G0008211.1 mouse_genomes_project 17 57998964 57999075 + Mir7b miRNA miRNA MGP_WSBEiJ_T0047211.1 MGP_WSBEiJ_G0023170.1 mouse_genomes_project 17 57594218 57686214 - MGP_WSBEiJ_P0047211 protein_coding protein_coding MGP_WSBEiJ_T0099240.1 MGP_WSBEiJ_G0037903.1 mouse_genomes_project 17 34728027 34728090 - Gm25744 snoRNA snoRNA MGP_WSBEiJ_T0046611.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37101150 37101872 + Trim26 protein_coding retained_intron MGP_WSBEiJ_T0046612.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37101157 37122098 + Trim26 protein_coding retained_intron MGP_WSBEiJ_T0046613.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37101157 37125447 + MGP_WSBEiJ_P0046613 Trim26 protein_coding protein_coding MGP_WSBEiJ_T0046614.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37101159 37125465 + MGP_WSBEiJ_P0046614 Trim26 protein_coding protein_coding MGP_WSBEiJ_T0046615.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37101162 37125447 + MGP_WSBEiJ_P0046615 Trim26 protein_coding protein_coding MGP_WSBEiJ_T0046616.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37101189 37117524 + MGP_WSBEiJ_P0046616 Trim26 protein_coding protein_coding MGP_WSBEiJ_T0046617.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37101200 37123694 + MGP_WSBEiJ_P0046617 Trim26 protein_coding protein_coding MGP_WSBEiJ_T0046618.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37101200 37125464 + MGP_WSBEiJ_P0046618 Trim26 protein_coding protein_coding MGP_WSBEiJ_T0046619.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37117336 37124006 + MGP_WSBEiJ_P0046619 Trim26 protein_coding protein_coding MGP_WSBEiJ_T0046620.1 MGP_WSBEiJ_G0022961.1 mouse_genomes_project 17 37119466 37125465 + Trim26 protein_coding processed_transcript MGP_WSBEiJ_T0100637.1 MGP_WSBEiJ_G0039095.1 mouse_genomes_project 17 34156774 34157167 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045076.1 MGP_WSBEiJ_G0022614.1 mouse_genomes_project 17 23656962 23658368 - MGP_WSBEiJ_P0045076 Fahd1 protein_coding protein_coding MGP_WSBEiJ_T0045199.1 MGP_WSBEiJ_G0022639.1 mouse_genomes_project 17 24130796 24134034 + MGP_WSBEiJ_P0045199 Prss28 protein_coding protein_coding MGP_WSBEiJ_T0100036.1 MGP_WSBEiJ_G0038665.1 mouse_genomes_project 17 24758106 24758469 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100037.1 MGP_WSBEiJ_G0038665.1 mouse_genomes_project 17 24758112 24758304 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0010028.1 MGP_WSBEiJ_G0008185.1 mouse_genomes_project 17 26333148 26333224 + Mir7216 miRNA miRNA MGP_WSBEiJ_T0011241.1 MGP_WSBEiJ_G0009398.1 mouse_genomes_project 17 88797852 88798051 + Gm27502 misc_RNA misc_RNA MGP_WSBEiJ_T0046692.1 MGP_WSBEiJ_G0022990.1 mouse_genomes_project 17 37837147 37839821 - MGP_WSBEiJ_P0046692 H2-M2 protein_coding protein_coding MGP_WSBEiJ_T0046693.1 MGP_WSBEiJ_G0022990.1 mouse_genomes_project 17 37837263 37839822 - MGP_WSBEiJ_P0046693 H2-M2 protein_coding protein_coding MGP_WSBEiJ_T0006868.1 MGP_WSBEiJ_G0005655.1 mouse_genomes_project 17 61915774 62052379 - Gm29051 lincRNA lincRNA MGP_WSBEiJ_T0044802.1 MGP_WSBEiJ_G0022522.1 mouse_genomes_project 17 19714564 19715554 + MGP_WSBEiJ_P0044802 Vmn1r234 protein_coding protein_coding MGP_WSBEiJ_T0047016.1 MGP_WSBEiJ_G0023115.1 mouse_genomes_project 17 48656889 48663046 - MGP_WSBEiJ_P0047016 Guca1a protein_coding protein_coding MGP_WSBEiJ_T0046986.1 MGP_WSBEiJ_G0023103.1 mouse_genomes_project 17 47929370 47945644 - MGP_WSBEiJ_P0046986 Cnpy3 protein_coding protein_coding MGP_WSBEiJ_T0046987.1 MGP_WSBEiJ_G0023103.1 mouse_genomes_project 17 47929421 47945627 - MGP_WSBEiJ_P0046987 Cnpy3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046988.1 MGP_WSBEiJ_G0023103.1 mouse_genomes_project 17 47930314 47931269 - Cnpy3 protein_coding retained_intron MGP_WSBEiJ_T0046989.1 MGP_WSBEiJ_G0023103.1 mouse_genomes_project 17 47940415 47945625 - MGP_WSBEiJ_P0046989 Cnpy3 protein_coding protein_coding MGP_WSBEiJ_T0046990.1 MGP_WSBEiJ_G0023103.1 mouse_genomes_project 17 47940647 47945607 - Cnpy3 protein_coding retained_intron MGP_WSBEiJ_T0045744.1 MGP_WSBEiJ_G0022766.1 mouse_genomes_project 17 30249469 30309158 + MGP_WSBEiJ_P0045744 Umodl1 protein_coding protein_coding MGP_WSBEiJ_T0045745.1 MGP_WSBEiJ_G0022766.1 mouse_genomes_project 17 30249469 30309158 + MGP_WSBEiJ_P0045745 Umodl1 protein_coding protein_coding MGP_WSBEiJ_T0045746.1 MGP_WSBEiJ_G0022766.1 mouse_genomes_project 17 30249473 30309158 + MGP_WSBEiJ_P0045746 Umodl1 protein_coding protein_coding MGP_WSBEiJ_T0045358.1 MGP_WSBEiJ_G0022677.1 mouse_genomes_project 17 24948549 24958297 - MGP_WSBEiJ_P0045358 Decr2 protein_coding protein_coding MGP_WSBEiJ_T0045359.1 MGP_WSBEiJ_G0022677.1 mouse_genomes_project 17 24950226 24951259 - Decr2 protein_coding processed_transcript MGP_WSBEiJ_T0045360.1 MGP_WSBEiJ_G0022677.1 mouse_genomes_project 17 24950975 24958297 - Decr2 protein_coding retained_intron MGP_WSBEiJ_T0045361.1 MGP_WSBEiJ_G0022677.1 mouse_genomes_project 17 24951432 24958287 - Decr2 protein_coding processed_transcript MGP_WSBEiJ_T0045362.1 MGP_WSBEiJ_G0022677.1 mouse_genomes_project 17 24955418 24958326 - Decr2 protein_coding processed_transcript MGP_WSBEiJ_T0047616.1 MGP_WSBEiJ_G0023315.1 mouse_genomes_project 17 81751762 81755587 + MGP_WSBEiJ_P0047616 Cebpzos protein_coding protein_coding MGP_WSBEiJ_T0047617.1 MGP_WSBEiJ_G0023315.1 mouse_genomes_project 17 81751779 81755587 + MGP_WSBEiJ_P0047617 Cebpzos protein_coding protein_coding MGP_WSBEiJ_T0047618.1 MGP_WSBEiJ_G0023315.1 mouse_genomes_project 17 81751962 81753719 + MGP_WSBEiJ_P0047618 Cebpzos protein_coding protein_coding MGP_WSBEiJ_T0044843.1 MGP_WSBEiJ_G0022547.1 mouse_genomes_project 17 21463959 21484263 - MGP_WSBEiJ_P0044843 Zfp945 protein_coding protein_coding MGP_WSBEiJ_T0044844.1 MGP_WSBEiJ_G0022547.1 mouse_genomes_project 17 21466292 21478848 - Zfp945 protein_coding retained_intron MGP_WSBEiJ_T0044845.1 MGP_WSBEiJ_G0022547.1 mouse_genomes_project 17 21466292 21484263 - MGP_WSBEiJ_P0044845 Zfp945 protein_coding protein_coding MGP_WSBEiJ_T0044846.1 MGP_WSBEiJ_G0022547.1 mouse_genomes_project 17 21469718 21484232 - MGP_WSBEiJ_P0044846 Zfp945 protein_coding protein_coding MGP_WSBEiJ_T0044847.1 MGP_WSBEiJ_G0022547.1 mouse_genomes_project 17 21478857 21484263 - Zfp945 protein_coding retained_intron MGP_WSBEiJ_T0006843.1 MGP_WSBEiJ_G0005637.1 mouse_genomes_project 17 34961155 34963223 + Gm17705 lincRNA lincRNA MGP_WSBEiJ_T0016971.1 MGP_WSBEiJ_G0014768.1 mouse_genomes_project 17 33587096 33595350 - Gm20427 processed_transcript retained_intron MGP_WSBEiJ_T0012975.1 MGP_WSBEiJ_G0011105.1 mouse_genomes_project 17 88142490 88155834 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000955.1 MGP_WSBEiJ_G0000890.1 mouse_genomes_project 17 51711925 51712943 + TEC TEC MGP_WSBEiJ_T0046025.1 MGP_WSBEiJ_G0022836.1 mouse_genomes_project 17 33497107 33501213 - protein_coding retained_intron MGP_WSBEiJ_T0046026.1 MGP_WSBEiJ_G0022836.1 mouse_genomes_project 17 33497107 33500034 - protein_coding processed_transcript MGP_WSBEiJ_T0046027.1 MGP_WSBEiJ_G0022836.1 mouse_genomes_project 17 33497762 33501206 - protein_coding retained_intron MGP_WSBEiJ_T0046028.1 MGP_WSBEiJ_G0022836.1 mouse_genomes_project 17 33500377 33501213 - protein_coding retained_intron MGP_WSBEiJ_T0046029.1 MGP_WSBEiJ_G0022836.1 mouse_genomes_project 17 33501071 33501539 - protein_coding processed_transcript MGP_WSBEiJ_T0046960.1 MGP_WSBEiJ_G0023092.1 mouse_genomes_project 17 47718500 47729085 - MGP_WSBEiJ_P0046960 Srf protein_coding protein_coding MGP_WSBEiJ_T0046875.1 MGP_WSBEiJ_G0023073.1 mouse_genomes_project 17 47255987 47274120 + MGP_WSBEiJ_P0046875 Mrps18a protein_coding protein_coding MGP_WSBEiJ_T0046876.1 MGP_WSBEiJ_G0023073.1 mouse_genomes_project 17 47255996 47268337 + Mrps18a protein_coding retained_intron MGP_WSBEiJ_T0046877.1 MGP_WSBEiJ_G0023073.1 mouse_genomes_project 17 47255997 47271075 + MGP_WSBEiJ_P0046877 Mrps18a protein_coding protein_coding MGP_WSBEiJ_T0046879.1 MGP_WSBEiJ_G0023073.1 mouse_genomes_project 17 47268012 47274080 + Mrps18a protein_coding processed_transcript MGP_WSBEiJ_T0046880.1 MGP_WSBEiJ_G0023073.1 mouse_genomes_project 17 47270484 47272933 + Mrps18a protein_coding retained_intron MGP_WSBEiJ_T0046881.1 MGP_WSBEiJ_G0023073.1 mouse_genomes_project 17 47270667 47274003 + Mrps18a protein_coding retained_intron MGP_WSBEiJ_T0047166.1 MGP_WSBEiJ_G0023152.1 mouse_genomes_project 17 51771933 51787883 - MGP_WSBEiJ_P0047166 Dazl protein_coding unknown_likely_coding MGP_WSBEiJ_T0047167.1 MGP_WSBEiJ_G0023152.1 mouse_genomes_project 17 51771937 51788542 - MGP_WSBEiJ_P0047167 Dazl protein_coding protein_coding MGP_WSBEiJ_T0044868.1 MGP_WSBEiJ_G0022553.1 mouse_genomes_project 17 22314447 22332526 - MGP_WSBEiJ_P0044868 Mmp25 protein_coding protein_coding MGP_WSBEiJ_T0006869.1 MGP_WSBEiJ_G0005656.1 mouse_genomes_project 17 66662738 66709883 - AU016765 lincRNA lincRNA MGP_WSBEiJ_T0006870.1 MGP_WSBEiJ_G0005656.1 mouse_genomes_project 17 66662791 66709841 - AU016765 lincRNA lincRNA MGP_WSBEiJ_T0006871.1 MGP_WSBEiJ_G0005656.1 mouse_genomes_project 17 66662794 66709921 - AU016765 lincRNA lincRNA MGP_WSBEiJ_T0006872.1 MGP_WSBEiJ_G0005656.1 mouse_genomes_project 17 66662796 66709764 - AU016765 lincRNA lincRNA MGP_WSBEiJ_T0047024.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48784818 48895422 + MGP_WSBEiJ_P0047024 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0047025.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48784846 48894817 + MGP_WSBEiJ_P0047025 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0047026.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48784923 48895979 + MGP_WSBEiJ_P0047026 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0047027.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48784929 48873784 + Ccnd3 protein_coding retained_intron MGP_WSBEiJ_T0047028.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48784986 48874184 + Ccnd3 protein_coding retained_intron MGP_WSBEiJ_T0047029.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48784998 48891153 + MGP_WSBEiJ_P0047029 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0047030.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48785007 48873956 + Ccnd3 protein_coding retained_intron MGP_WSBEiJ_T0047031.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48785008 48787674 + Ccnd3 protein_coding retained_intron MGP_WSBEiJ_T0047032.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48785008 48896001 + MGP_WSBEiJ_P0047032 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0047033.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48890804 48895526 + Ccnd3 protein_coding retained_intron MGP_WSBEiJ_T0047034.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48890897 48894931 + MGP_WSBEiJ_P0047034 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0047035.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48891023 48896128 + MGP_WSBEiJ_P0047035 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0047036.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48891681 48894847 + MGP_WSBEiJ_P0047036 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0047037.1 MGP_WSBEiJ_G0023119.1 mouse_genomes_project 17 48892124 48896215 + MGP_WSBEiJ_P0047037 Ccnd3 protein_coding protein_coding MGP_WSBEiJ_T0045685.1 MGP_WSBEiJ_G0022750.1 mouse_genomes_project 17 28518916 28534651 - MGP_WSBEiJ_P0045685 Mtch1 protein_coding protein_coding MGP_WSBEiJ_T0045686.1 MGP_WSBEiJ_G0022750.1 mouse_genomes_project 17 28518920 28534651 - MGP_WSBEiJ_P0045686 Mtch1 protein_coding protein_coding MGP_WSBEiJ_T0045687.1 MGP_WSBEiJ_G0022750.1 mouse_genomes_project 17 28518958 28520850 - Mtch1 protein_coding processed_transcript MGP_WSBEiJ_T0045688.1 MGP_WSBEiJ_G0022750.1 mouse_genomes_project 17 28520563 28520952 - Mtch1 protein_coding processed_transcript MGP_WSBEiJ_T0045689.1 MGP_WSBEiJ_G0022750.1 mouse_genomes_project 17 28522098 28527102 - Mtch1 protein_coding retained_intron MGP_WSBEiJ_T0045690.1 MGP_WSBEiJ_G0022750.1 mouse_genomes_project 17 28526480 28533918 - MGP_WSBEiJ_P0045690 Mtch1 protein_coding protein_coding MGP_WSBEiJ_T0045691.1 MGP_WSBEiJ_G0022750.1 mouse_genomes_project 17 28527442 28529571 - Mtch1 protein_coding retained_intron MGP_WSBEiJ_T0045786.1 MGP_WSBEiJ_G0022777.1 mouse_genomes_project 17 30855576 30870824 + MGP_WSBEiJ_P0045786 Ndufv3 protein_coding protein_coding MGP_WSBEiJ_T0045787.1 MGP_WSBEiJ_G0022777.1 mouse_genomes_project 17 30855611 30867348 + Ndufv3 protein_coding processed_transcript MGP_WSBEiJ_T0045788.1 MGP_WSBEiJ_G0022777.1 mouse_genomes_project 17 30855619 30870827 + MGP_WSBEiJ_P0045788 Ndufv3 protein_coding protein_coding MGP_WSBEiJ_T0045789.1 MGP_WSBEiJ_G0022777.1 mouse_genomes_project 17 30855646 30866751 + MGP_WSBEiJ_P0045789 Ndufv3 protein_coding protein_coding MGP_WSBEiJ_T0045790.1 MGP_WSBEiJ_G0022777.1 mouse_genomes_project 17 30868599 30870827 + Ndufv3 protein_coding processed_transcript MGP_WSBEiJ_T0044967.1 MGP_WSBEiJ_G0022583.1 mouse_genomes_project 17 22969209 22974956 - MGP_WSBEiJ_P0044967 1600002H07Rik protein_coding protein_coding MGP_WSBEiJ_T0044968.1 MGP_WSBEiJ_G0022583.1 mouse_genomes_project 17 22969394 22975017 - 1600002H07Rik protein_coding retained_intron MGP_WSBEiJ_T0044969.1 MGP_WSBEiJ_G0022583.1 mouse_genomes_project 17 22969701 22974858 - MGP_WSBEiJ_P0044969 1600002H07Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044970.1 MGP_WSBEiJ_G0022583.1 mouse_genomes_project 17 22973344 22974897 - 1600002H07Rik protein_coding retained_intron MGP_WSBEiJ_T0044971.1 MGP_WSBEiJ_G0022583.1 mouse_genomes_project 17 22973946 22974919 - 1600002H07Rik protein_coding retained_intron MGP_WSBEiJ_T0098015.1 MGP_WSBEiJ_G0036678.1 mouse_genomes_project 17 87406331 87406438 - Gm24492 snRNA snRNA MGP_WSBEiJ_T0044973.1 MGP_WSBEiJ_G0022585.1 mouse_genomes_project 17 23014666 23114565 - MGP_WSBEiJ_P0044973 Abca17 protein_coding protein_coding MGP_WSBEiJ_T0044974.1 MGP_WSBEiJ_G0022585.1 mouse_genomes_project 17 23014686 23110786 - MGP_WSBEiJ_P0044974 Abca17 protein_coding protein_coding MGP_WSBEiJ_T0046369.1 MGP_WSBEiJ_G0022909.1 mouse_genomes_project 17 34920646 34923700 - MGP_WSBEiJ_P0046369 Apom protein_coding protein_coding MGP_WSBEiJ_T0045809.1 MGP_WSBEiJ_G0022783.1 mouse_genomes_project 17 31317277 31404775 - MGP_WSBEiJ_P0045809 Hsf2bp protein_coding protein_coding MGP_WSBEiJ_T0045810.1 MGP_WSBEiJ_G0022783.1 mouse_genomes_project 17 31380985 31393484 - Hsf2bp protein_coding processed_transcript MGP_WSBEiJ_T0098017.1 MGP_WSBEiJ_G0036680.1 mouse_genomes_project 17 87759626 87759735 + Gm26066 snRNA snRNA MGP_WSBEiJ_T0046405.1 MGP_WSBEiJ_G0022916.1 mouse_genomes_project 17 35006241 35008363 - MGP_WSBEiJ_P0046405 Lta protein_coding protein_coding MGP_WSBEiJ_T0047604.1 MGP_WSBEiJ_G0023310.1 mouse_genomes_project 17 81583464 81664484 - MGP_WSBEiJ_P0047604 Heatr5b protein_coding protein_coding MGP_WSBEiJ_T0047390.1 MGP_WSBEiJ_G0023250.1 mouse_genomes_project 17 67842827 67978441 - MGP_WSBEiJ_P0047390 Rab31 protein_coding protein_coding MGP_WSBEiJ_T0046098.1 MGP_WSBEiJ_G0022850.1 mouse_genomes_project 17 33800881 33804044 + MGP_WSBEiJ_P0046098 Psmb8 protein_coding protein_coding MGP_WSBEiJ_T0046099.1 MGP_WSBEiJ_G0022850.1 mouse_genomes_project 17 33800950 33804581 + MGP_WSBEiJ_P0046099 Psmb8 protein_coding protein_coding MGP_WSBEiJ_T0046100.1 MGP_WSBEiJ_G0022850.1 mouse_genomes_project 17 33801766 33804551 + Psmb8 protein_coding retained_intron MGP_WSBEiJ_T0011225.1 MGP_WSBEiJ_G0009382.1 mouse_genomes_project 17 37241062 37241138 - Gm27735 misc_RNA misc_RNA MGP_WSBEiJ_T0046091.1 MGP_WSBEiJ_G0022849.1 mouse_genomes_project 17 33789726 33799259 + MGP_WSBEiJ_P0046091 Tap1 protein_coding protein_coding MGP_WSBEiJ_T0046092.1 MGP_WSBEiJ_G0022849.1 mouse_genomes_project 17 33789901 33794306 + Tap1 protein_coding retained_intron MGP_WSBEiJ_T0046093.1 MGP_WSBEiJ_G0022849.1 mouse_genomes_project 17 33789907 33799259 + Tap1 protein_coding retained_intron MGP_WSBEiJ_T0046094.1 MGP_WSBEiJ_G0022849.1 mouse_genomes_project 17 33789975 33799253 + MGP_WSBEiJ_P0046094 Tap1 protein_coding protein_coding MGP_WSBEiJ_T0046095.1 MGP_WSBEiJ_G0022849.1 mouse_genomes_project 17 33791919 33799254 + Tap1 protein_coding retained_intron MGP_WSBEiJ_T0046096.1 MGP_WSBEiJ_G0022849.1 mouse_genomes_project 17 33792780 33795606 + MGP_WSBEiJ_P0046096 Tap1 protein_coding protein_coding MGP_WSBEiJ_T0046097.1 MGP_WSBEiJ_G0022849.1 mouse_genomes_project 17 33795082 33798621 + Tap1 protein_coding retained_intron MGP_WSBEiJ_T0047775.1 MGP_WSBEiJ_G0023381.1 mouse_genomes_project 17 91944462 92008389 + MGP_WSBEiJ_P0047775 Ppp1r21 protein_coding protein_coding MGP_WSBEiJ_T0047776.1 MGP_WSBEiJ_G0023381.1 mouse_genomes_project 17 91944560 91958695 + Ppp1r21 protein_coding retained_intron MGP_WSBEiJ_T0047777.1 MGP_WSBEiJ_G0023381.1 mouse_genomes_project 17 91980800 91984475 + Ppp1r21 protein_coding retained_intron MGP_WSBEiJ_T0047778.1 MGP_WSBEiJ_G0023381.1 mouse_genomes_project 17 91993575 91995807 + Ppp1r21 protein_coding retained_intron MGP_WSBEiJ_T0047779.1 MGP_WSBEiJ_G0023381.1 mouse_genomes_project 17 91993693 91997663 + Ppp1r21 protein_coding retained_intron MGP_WSBEiJ_T0047780.1 MGP_WSBEiJ_G0023381.1 mouse_genomes_project 17 91997212 92008387 + Ppp1r21 protein_coding retained_intron MGP_WSBEiJ_T0044893.1 MGP_WSBEiJ_G0022564.1 mouse_genomes_project 17 22443705 22461235 - MGP_WSBEiJ_P0044893 Flywch1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0044894.1 MGP_WSBEiJ_G0022564.1 mouse_genomes_project 17 22445308 22461201 - MGP_WSBEiJ_P0044894 Flywch1 protein_coding protein_coding MGP_WSBEiJ_T0044895.1 MGP_WSBEiJ_G0022564.1 mouse_genomes_project 17 22445317 22453668 - MGP_WSBEiJ_P0044895 Flywch1 protein_coding protein_coding MGP_WSBEiJ_T0003674.1 MGP_WSBEiJ_G0003309.1 mouse_genomes_project 17 33649459 33661073 - BC051537 antisense antisense MGP_WSBEiJ_T0047537.1 MGP_WSBEiJ_G0023285.1 mouse_genomes_project 17 74341159 74418478 + MGP_WSBEiJ_P0047537 Clip4 protein_coding protein_coding MGP_WSBEiJ_T0047538.1 MGP_WSBEiJ_G0023285.1 mouse_genomes_project 17 74341915 74418484 + MGP_WSBEiJ_P0047538 Clip4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000964.1 MGP_WSBEiJ_G0000899.1 mouse_genomes_project 17 53416447 53420506 + TEC TEC MGP_WSBEiJ_T0045163.1 MGP_WSBEiJ_G0022631.1 mouse_genomes_project 17 23998520 24001626 + MGP_WSBEiJ_P0045163 BC003965 protein_coding protein_coding MGP_WSBEiJ_T0046386.1 MGP_WSBEiJ_G0022911.1 mouse_genomes_project 17 34945329 34960934 - MGP_WSBEiJ_P0046386 Prrc2a protein_coding protein_coding MGP_WSBEiJ_T0046387.1 MGP_WSBEiJ_G0022911.1 mouse_genomes_project 17 34945342 34959007 - MGP_WSBEiJ_P0046387 Prrc2a protein_coding protein_coding MGP_WSBEiJ_T0046388.1 MGP_WSBEiJ_G0022911.1 mouse_genomes_project 17 34945431 34946624 - Prrc2a protein_coding retained_intron MGP_WSBEiJ_T0046389.1 MGP_WSBEiJ_G0022911.1 mouse_genomes_project 17 34946590 34947210 - Prrc2a protein_coding retained_intron MGP_WSBEiJ_T0046390.1 MGP_WSBEiJ_G0022911.1 mouse_genomes_project 17 34948235 34949297 - Prrc2a protein_coding retained_intron MGP_WSBEiJ_T0046391.1 MGP_WSBEiJ_G0022911.1 mouse_genomes_project 17 34953170 34960872 - Prrc2a protein_coding processed_transcript MGP_WSBEiJ_T0047361.1 MGP_WSBEiJ_G0023237.1 mouse_genomes_project 17 59579499 60214105 + MGP_WSBEiJ_P0047361 Cntnap5c protein_coding unknown_likely_coding MGP_WSBEiJ_T0047362.1 MGP_WSBEiJ_G0023237.1 mouse_genomes_project 17 59579905 60210725 + MGP_WSBEiJ_P0047362 Cntnap5c protein_coding protein_coding MGP_WSBEiJ_T0046114.1 MGP_WSBEiJ_G0022855.1 mouse_genomes_project 17 33878933 33884049 - MGP_WSBEiJ_P0046114 H2-Aa protein_coding protein_coding MGP_WSBEiJ_T0046115.1 MGP_WSBEiJ_G0022855.1 mouse_genomes_project 17 33878954 33884013 - MGP_WSBEiJ_P0046115 H2-Aa protein_coding protein_coding MGP_WSBEiJ_T0046116.1 MGP_WSBEiJ_G0022855.1 mouse_genomes_project 17 33879961 33883999 - H2-Aa protein_coding retained_intron MGP_WSBEiJ_T0046117.1 MGP_WSBEiJ_G0022855.1 mouse_genomes_project 17 33882684 33884041 - H2-Aa protein_coding processed_transcript MGP_WSBEiJ_T0010036.1 MGP_WSBEiJ_G0008193.1 mouse_genomes_project 17 33415717 33415775 - Gm27775 miRNA miRNA MGP_WSBEiJ_T0097302.1 MGP_WSBEiJ_G0035977.1 mouse_genomes_project 17 76290738 76295367 - D630014O11Rik sense_intronic sense_intronic MGP_WSBEiJ_T0047090.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49188357 49255899 - MGP_WSBEiJ_P0047090 Foxp4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047091.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49188362 49255946 - MGP_WSBEiJ_P0047091 Foxp4 protein_coding protein_coding MGP_WSBEiJ_T0047092.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49188993 49255701 - MGP_WSBEiJ_P0047092 Foxp4 protein_coding protein_coding MGP_WSBEiJ_T0047093.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49188993 49255736 - MGP_WSBEiJ_P0047093 Foxp4 protein_coding protein_coding MGP_WSBEiJ_T0047094.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49188997 49255777 - MGP_WSBEiJ_P0047094 Foxp4 protein_coding protein_coding MGP_WSBEiJ_T0047095.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49199812 49210924 - Foxp4 protein_coding processed_transcript MGP_WSBEiJ_T0047096.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49200007 49200481 - Foxp4 protein_coding retained_intron MGP_WSBEiJ_T0047097.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49201870 49210624 - Foxp4 protein_coding retained_intron MGP_WSBEiJ_T0047098.1 MGP_WSBEiJ_G0023131.1 mouse_genomes_project 17 49210370 49255727 - Foxp4 protein_coding retained_intron MGP_WSBEiJ_T0006824.1 MGP_WSBEiJ_G0005623.1 mouse_genomes_project 17 28228552 28249838 - Trp53cor1 lincRNA lincRNA MGP_WSBEiJ_T0003688.1 MGP_WSBEiJ_G0003322.1 mouse_genomes_project 17 44595461 44598633 - 1700071M16Rik antisense antisense MGP_WSBEiJ_T0003689.1 MGP_WSBEiJ_G0003322.1 mouse_genomes_project 17 44595654 44598633 - 1700071M16Rik antisense antisense MGP_WSBEiJ_T0003690.1 MGP_WSBEiJ_G0003322.1 mouse_genomes_project 17 44598283 44599566 - 1700071M16Rik antisense antisense MGP_WSBEiJ_T0003691.1 MGP_WSBEiJ_G0003322.1 mouse_genomes_project 17 44598283 44599556 - 1700071M16Rik antisense antisense MGP_WSBEiJ_T0047456.1 MGP_WSBEiJ_G0023269.1 mouse_genomes_project 17 71842408 71895649 + MGP_WSBEiJ_P0047456 Akain1 protein_coding protein_coding MGP_WSBEiJ_T0047051.1 MGP_WSBEiJ_G0023125.1 mouse_genomes_project 17 48990281 49001357 - MGP_WSBEiJ_P0047051 Prickle4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047709.1 MGP_WSBEiJ_G0023356.1 mouse_genomes_project 17 88224898 88251640 - MGP_WSBEiJ_P0047709 Prepl protein_coding protein_coding MGP_WSBEiJ_T0047710.1 MGP_WSBEiJ_G0023356.1 mouse_genomes_project 17 88224898 88251640 - MGP_WSBEiJ_P0047710 Prepl protein_coding protein_coding MGP_WSBEiJ_T0012923.1 MGP_WSBEiJ_G0011053.1 mouse_genomes_project 17 33638022 33640418 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047406.1 MGP_WSBEiJ_G0023253.1 mouse_genomes_project 17 68134562 68166655 - MGP_WSBEiJ_P0047406 Twsg1 protein_coding protein_coding MGP_WSBEiJ_T0046630.1 MGP_WSBEiJ_G0022966.1 mouse_genomes_project 17 37216211 37221276 + MGP_WSBEiJ_P0046630 Rnf39 protein_coding protein_coding MGP_WSBEiJ_T0046631.1 MGP_WSBEiJ_G0022966.1 mouse_genomes_project 17 37216348 37218905 + MGP_WSBEiJ_P0046631 Rnf39 protein_coding protein_coding MGP_WSBEiJ_T0046632.1 MGP_WSBEiJ_G0022966.1 mouse_genomes_project 17 37218367 37220576 + MGP_WSBEiJ_P0046632 Rnf39 protein_coding protein_coding MGP_WSBEiJ_T0016970.1 MGP_WSBEiJ_G0014767.1 mouse_genomes_project 17 33280918 33282788 + Gm17251 processed_transcript processed_transcript MGP_WSBEiJ_T0044581.1 MGP_WSBEiJ_G0022436.1 mouse_genomes_project 17 6095726 6099446 + MGP_WSBEiJ_P0044581 Prr18 protein_coding protein_coding MGP_WSBEiJ_T0044582.1 MGP_WSBEiJ_G0022436.1 mouse_genomes_project 17 6096059 6099446 + MGP_WSBEiJ_P0044582 Prr18 protein_coding protein_coding MGP_WSBEiJ_T0047530.1 MGP_WSBEiJ_G0023283.1 mouse_genomes_project 17 74227650 74241393 + Fam179a protein_coding processed_transcript MGP_WSBEiJ_T0047531.1 MGP_WSBEiJ_G0023283.1 mouse_genomes_project 17 74227650 74285710 + MGP_WSBEiJ_P0047531 Fam179a protein_coding protein_coding MGP_WSBEiJ_T0047532.1 MGP_WSBEiJ_G0023283.1 mouse_genomes_project 17 74227654 74245400 + Fam179a protein_coding processed_transcript MGP_WSBEiJ_T0047533.1 MGP_WSBEiJ_G0023283.1 mouse_genomes_project 17 74241025 74285710 + MGP_WSBEiJ_P0047533 Fam179a protein_coding protein_coding MGP_WSBEiJ_T0047534.1 MGP_WSBEiJ_G0023283.1 mouse_genomes_project 17 74242936 74285584 + MGP_WSBEiJ_P0047534 Fam179a protein_coding protein_coding MGP_WSBEiJ_T0047535.1 MGP_WSBEiJ_G0023283.1 mouse_genomes_project 17 74269383 74285710 + Fam179a protein_coding retained_intron MGP_WSBEiJ_T0046715.1 MGP_WSBEiJ_G0023010.1 mouse_genomes_project 17 38563065 38564007 - MGP_WSBEiJ_P0046715 Olfr132 protein_coding protein_coding MGP_WSBEiJ_T0099259.1 MGP_WSBEiJ_G0037922.1 mouse_genomes_project 17 90761435 90761569 - Gm26005 snoRNA snoRNA MGP_WSBEiJ_T0099248.1 MGP_WSBEiJ_G0037911.1 mouse_genomes_project 17 64511217 64511351 - Gm25800 snoRNA snoRNA MGP_WSBEiJ_T0012920.1 MGP_WSBEiJ_G0011050.1 mouse_genomes_project 17 26816711 26817528 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046740.1 MGP_WSBEiJ_G0023030.1 mouse_genomes_project 17 41500529 41504554 + MGP_WSBEiJ_P0046740 Esp4 protein_coding protein_coding MGP_WSBEiJ_T0046407.1 MGP_WSBEiJ_G0022918.1 mouse_genomes_project 17 35030393 35033737 + MGP_WSBEiJ_P0046407 Gm16181 protein_coding protein_coding MGP_WSBEiJ_T0003656.1 MGP_WSBEiJ_G0003298.1 mouse_genomes_project 17 27050850 27071123 - Gm15598 antisense antisense MGP_WSBEiJ_T0010057.1 MGP_WSBEiJ_G0008214.1 mouse_genomes_project 17 65424252 65424336 + Gm24813 miRNA miRNA MGP_WSBEiJ_T0044692.1 MGP_WSBEiJ_G0022470.1 mouse_genomes_project 17 12767744 12800645 - MGP_WSBEiJ_P0044692 Thbs2 protein_coding protein_coding MGP_WSBEiJ_T0011240.1 MGP_WSBEiJ_G0009397.1 mouse_genomes_project 17 88796508 88796780 + Gm27275 misc_RNA misc_RNA MGP_WSBEiJ_T0011224.1 MGP_WSBEiJ_G0009381.1 mouse_genomes_project 17 36313215 36313534 - Gm22453 misc_RNA misc_RNA MGP_WSBEiJ_T0045873.1 MGP_WSBEiJ_G0022800.1 mouse_genomes_project 17 32294962 32315269 - MGP_WSBEiJ_P0045873 Zfp799 protein_coding protein_coding MGP_WSBEiJ_T0045874.1 MGP_WSBEiJ_G0022800.1 mouse_genomes_project 17 32294968 32306259 - MGP_WSBEiJ_P0045874 Zfp799 protein_coding protein_coding MGP_WSBEiJ_T0045875.1 MGP_WSBEiJ_G0022800.1 mouse_genomes_project 17 32304882 32315236 - MGP_WSBEiJ_P0045875 Zfp799 protein_coding protein_coding MGP_WSBEiJ_T0045876.1 MGP_WSBEiJ_G0022800.1 mouse_genomes_project 17 32305136 32315254 - MGP_WSBEiJ_P0045876 Zfp799 protein_coding protein_coding MGP_WSBEiJ_T0045877.1 MGP_WSBEiJ_G0022800.1 mouse_genomes_project 17 32305500 32315223 - MGP_WSBEiJ_P0045877 Zfp799 protein_coding protein_coding MGP_WSBEiJ_T0100651.1 MGP_WSBEiJ_G0039109.1 mouse_genomes_project 17 36710117 36711345 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047724.1 MGP_WSBEiJ_G0023363.1 mouse_genomes_project 17 90015768 90101810 + MGP_WSBEiJ_P0047724 Epas1 protein_coding protein_coding MGP_WSBEiJ_T0045170.1 MGP_WSBEiJ_G0022633.1 mouse_genomes_project 17 24045885 24055251 + MGP_WSBEiJ_P0045170 Gm5819 protein_coding protein_coding MGP_WSBEiJ_T0046101.1 MGP_WSBEiJ_G0022851.1 mouse_genomes_project 17 33807588 33820532 + MGP_WSBEiJ_P0046101 Tap2 protein_coding protein_coding MGP_WSBEiJ_T0046102.1 MGP_WSBEiJ_G0022851.1 mouse_genomes_project 17 33808141 33809391 + MGP_WSBEiJ_P0046102 Tap2 protein_coding protein_coding MGP_WSBEiJ_T0046103.1 MGP_WSBEiJ_G0022851.1 mouse_genomes_project 17 33808600 33820529 + Tap2 protein_coding retained_intron MGP_WSBEiJ_T0046104.1 MGP_WSBEiJ_G0022851.1 mouse_genomes_project 17 33809126 33809590 + MGP_WSBEiJ_P0046104 Tap2 protein_coding protein_coding MGP_WSBEiJ_T0046105.1 MGP_WSBEiJ_G0022851.1 mouse_genomes_project 17 33811653 33813277 + Tap2 protein_coding processed_transcript MGP_WSBEiJ_T0044917.1 MGP_WSBEiJ_G0022570.1 mouse_genomes_project 17 22541677 22552996 + Prss32 protein_coding processed_transcript MGP_WSBEiJ_T0044918.1 MGP_WSBEiJ_G0022570.1 mouse_genomes_project 17 22552075 22558250 + MGP_WSBEiJ_P0044918 Prss32 protein_coding protein_coding MGP_WSBEiJ_T0044919.1 MGP_WSBEiJ_G0022570.1 mouse_genomes_project 17 22552318 22557810 + MGP_WSBEiJ_P0044919 Prss32 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100237.1 MGP_WSBEiJ_G0038780.1 mouse_genomes_project 17 34122709 34203176 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100238.1 MGP_WSBEiJ_G0038780.1 mouse_genomes_project 17 34126641 34130142 - transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100239.1 MGP_WSBEiJ_G0038780.1 mouse_genomes_project 17 34143462 34177902 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0047307.1 MGP_WSBEiJ_G0023207.1 mouse_genomes_project 17 58519185 58525674 + MGP_WSBEiJ_P0047307 Ndufa11 protein_coding protein_coding MGP_WSBEiJ_T0100618.1 MGP_WSBEiJ_G0039076.1 mouse_genomes_project 17 18878478 18879330 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046919.1 MGP_WSBEiJ_G0023082.1 mouse_genomes_project 17 47405958 47432251 - MGP_WSBEiJ_P0046919 Tjap1 protein_coding protein_coding MGP_WSBEiJ_T0046920.1 MGP_WSBEiJ_G0023082.1 mouse_genomes_project 17 47405958 47432251 - MGP_WSBEiJ_P0046920 Tjap1 protein_coding protein_coding MGP_WSBEiJ_T0046921.1 MGP_WSBEiJ_G0023082.1 mouse_genomes_project 17 47405958 47432251 - MGP_WSBEiJ_P0046921 Tjap1 protein_coding protein_coding MGP_WSBEiJ_T0046922.1 MGP_WSBEiJ_G0023082.1 mouse_genomes_project 17 47408831 47411895 - MGP_WSBEiJ_P0046922 Tjap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047255.1 MGP_WSBEiJ_G0023194.1 mouse_genomes_project 17 58056750 58062919 - MGP_WSBEiJ_P0047255 Arrdc5 protein_coding protein_coding MGP_WSBEiJ_T0006805.1 MGP_WSBEiJ_G0005607.1 mouse_genomes_project 17 20022862 20032327 - 9330136K24Rik lincRNA lincRNA MGP_WSBEiJ_T0047731.1 MGP_WSBEiJ_G0023368.1 mouse_genomes_project 17 90301506 90310419 + MGP_WSBEiJ_P0047731 Cript protein_coding protein_coding MGP_WSBEiJ_T0047732.1 MGP_WSBEiJ_G0023368.1 mouse_genomes_project 17 90301566 90304199 + Cript protein_coding retained_intron MGP_WSBEiJ_T0047733.1 MGP_WSBEiJ_G0023368.1 mouse_genomes_project 17 90301567 90310081 + MGP_WSBEiJ_P0047733 Cript protein_coding protein_coding MGP_WSBEiJ_T0047039.1 MGP_WSBEiJ_G0023121.1 mouse_genomes_project 17 48909545 48922257 + MGP_WSBEiJ_P0047039 Med20 protein_coding protein_coding MGP_WSBEiJ_T0047040.1 MGP_WSBEiJ_G0023121.1 mouse_genomes_project 17 48909548 48917401 + Med20 protein_coding retained_intron MGP_WSBEiJ_T0047043.1 MGP_WSBEiJ_G0023121.1 mouse_genomes_project 17 48909571 48922087 + Med20 protein_coding retained_intron MGP_WSBEiJ_T0047045.1 MGP_WSBEiJ_G0023121.1 mouse_genomes_project 17 48909584 48911259 + Med20 protein_coding retained_intron MGP_WSBEiJ_T0046812.1 MGP_WSBEiJ_G0023062.1 mouse_genomes_project 17 46639525 46647175 - MGP_WSBEiJ_P0046812 Tmem151b protein_coding protein_coding MGP_WSBEiJ_T0044768.1 MGP_WSBEiJ_G0022494.1 mouse_genomes_project 17 16264929 16347044 + MGP_WSBEiJ_P0044768 Vmn2r124 protein_coding protein_coding MGP_WSBEiJ_T0046676.1 MGP_WSBEiJ_G0022975.1 mouse_genomes_project 17 37382220 37383159 - MGP_WSBEiJ_P0046676 Olfr91 protein_coding protein_coding MGP_WSBEiJ_T0046447.1 MGP_WSBEiJ_G0022930.1 mouse_genomes_project 17 35574168 35588145 - protein_coding processed_transcript MGP_WSBEiJ_T0047728.1 MGP_WSBEiJ_G0023366.1 mouse_genomes_project 17 90240544 90277309 + MGP_WSBEiJ_P0047728 Rhoq protein_coding protein_coding MGP_WSBEiJ_T0047729.1 MGP_WSBEiJ_G0023366.1 mouse_genomes_project 17 90240754 90272340 + MGP_WSBEiJ_P0047729 Rhoq protein_coding protein_coding MGP_WSBEiJ_T0047643.1 MGP_WSBEiJ_G0023326.1 mouse_genomes_project 17 83036981 83097047 + MGP_WSBEiJ_P0047643 Galm protein_coding protein_coding MGP_WSBEiJ_T0047644.1 MGP_WSBEiJ_G0023326.1 mouse_genomes_project 17 83056905 83095470 + MGP_WSBEiJ_P0047644 Galm protein_coding protein_coding MGP_WSBEiJ_T0047630.1 MGP_WSBEiJ_G0023320.1 mouse_genomes_project 17 82189573 82210699 - MGP_WSBEiJ_P0047630 Cdc42ep3 protein_coding protein_coding MGP_WSBEiJ_T0045512.1 MGP_WSBEiJ_G0022714.1 mouse_genomes_project 17 26783457 26862555 - MGP_WSBEiJ_P0045512 D17Wsu92e protein_coding protein_coding MGP_WSBEiJ_T0045513.1 MGP_WSBEiJ_G0022714.1 mouse_genomes_project 17 26783471 26862518 - MGP_WSBEiJ_P0045513 D17Wsu92e protein_coding protein_coding MGP_WSBEiJ_T0045514.1 MGP_WSBEiJ_G0022714.1 mouse_genomes_project 17 26799727 26862555 - MGP_WSBEiJ_P0045514 D17Wsu92e protein_coding protein_coding MGP_WSBEiJ_T0045480.1 MGP_WSBEiJ_G0022708.1 mouse_genomes_project 17 26572457 26579655 + MGP_WSBEiJ_P0045480 protein_coding protein_coding MGP_WSBEiJ_T0045481.1 MGP_WSBEiJ_G0022708.1 mouse_genomes_project 17 26572512 26579010 + MGP_WSBEiJ_P0045481 protein_coding protein_coding MGP_WSBEiJ_T0045482.1 MGP_WSBEiJ_G0022708.1 mouse_genomes_project 17 26572539 26579045 + MGP_WSBEiJ_P0045482 protein_coding protein_coding MGP_WSBEiJ_T0045483.1 MGP_WSBEiJ_G0022708.1 mouse_genomes_project 17 26572539 26579648 + MGP_WSBEiJ_P0045483 protein_coding protein_coding MGP_WSBEiJ_T0000970.1 MGP_WSBEiJ_G0000905.1 mouse_genomes_project 17 91947347 91947528 + TEC TEC MGP_WSBEiJ_T0047734.1 MGP_WSBEiJ_G0023369.1 mouse_genomes_project 17 90385576 90416319 + MGP_WSBEiJ_P0047734 Socs5 protein_coding protein_coding MGP_WSBEiJ_T0045575.1 MGP_WSBEiJ_G0022726.1 mouse_genomes_project 17 27429990 27441350 - MGP_WSBEiJ_P0045575 Tead3 protein_coding protein_coding MGP_WSBEiJ_T0045576.1 MGP_WSBEiJ_G0022726.1 mouse_genomes_project 17 27429990 27452134 - MGP_WSBEiJ_P0045576 Tead3 protein_coding protein_coding MGP_WSBEiJ_T0045577.1 MGP_WSBEiJ_G0022726.1 mouse_genomes_project 17 27429994 27441350 - MGP_WSBEiJ_P0045577 Tead3 protein_coding protein_coding MGP_WSBEiJ_T0045578.1 MGP_WSBEiJ_G0022726.1 mouse_genomes_project 17 27430033 27441350 - MGP_WSBEiJ_P0045578 Tead3 protein_coding protein_coding MGP_WSBEiJ_T0045579.1 MGP_WSBEiJ_G0022726.1 mouse_genomes_project 17 27430037 27441350 - Tead3 protein_coding retained_intron MGP_WSBEiJ_T0045580.1 MGP_WSBEiJ_G0022726.1 mouse_genomes_project 17 27431837 27433695 - Tead3 protein_coding retained_intron MGP_WSBEiJ_T0045581.1 MGP_WSBEiJ_G0022726.1 mouse_genomes_project 17 27432254 27434632 - Tead3 protein_coding processed_transcript MGP_WSBEiJ_T0046719.1 MGP_WSBEiJ_G0023013.1 mouse_genomes_project 17 38639032 38641151 + MGP_WSBEiJ_P0046719 Olfr135 protein_coding protein_coding MGP_WSBEiJ_T0046042.1 MGP_WSBEiJ_G0022840.1 mouse_genomes_project 17 33592043 33595468 - MGP_WSBEiJ_P0046042 Slc39a7 protein_coding protein_coding MGP_WSBEiJ_T0046043.1 MGP_WSBEiJ_G0022840.1 mouse_genomes_project 17 33592045 33595322 - MGP_WSBEiJ_P0046043 Slc39a7 protein_coding protein_coding MGP_WSBEiJ_T0046044.1 MGP_WSBEiJ_G0022840.1 mouse_genomes_project 17 33592049 33595426 - Slc39a7 protein_coding retained_intron MGP_WSBEiJ_T0046045.1 MGP_WSBEiJ_G0022840.1 mouse_genomes_project 17 33593623 33594806 - Slc39a7 protein_coding retained_intron MGP_WSBEiJ_T0046046.1 MGP_WSBEiJ_G0022840.1 mouse_genomes_project 17 33593951 33595434 - MGP_WSBEiJ_P0046046 Slc39a7 protein_coding protein_coding MGP_WSBEiJ_T0046047.1 MGP_WSBEiJ_G0022840.1 mouse_genomes_project 17 33594370 33595460 - Slc39a7 protein_coding processed_transcript MGP_WSBEiJ_T0047341.1 MGP_WSBEiJ_G0023226.1 mouse_genomes_project 17 58927623 58941553 - MGP_WSBEiJ_P0047341 protein_coding protein_coding MGP_WSBEiJ_T0012964.1 MGP_WSBEiJ_G0011094.1 mouse_genomes_project 17 70167503 70168440 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0046330.1 MGP_WSBEiJ_G0022898.1 mouse_genomes_project 17 34849297 34852767 - MGP_WSBEiJ_P0046330 G6b protein_coding protein_coding MGP_WSBEiJ_T0046331.1 MGP_WSBEiJ_G0022898.1 mouse_genomes_project 17 34850932 34852753 - MGP_WSBEiJ_P0046331 G6b protein_coding protein_coding MGP_WSBEiJ_T0046803.1 MGP_WSBEiJ_G0023057.1 mouse_genomes_project 17 45851132 46198622 + MGP_WSBEiJ_P0046803 Supt3 protein_coding protein_coding MGP_WSBEiJ_T0046804.1 MGP_WSBEiJ_G0023057.1 mouse_genomes_project 17 45852373 46004761 + Supt3 protein_coding processed_transcript MGP_WSBEiJ_T0046805.1 MGP_WSBEiJ_G0023057.1 mouse_genomes_project 17 45852444 46198618 + MGP_WSBEiJ_P0046805 Supt3 protein_coding protein_coding MGP_WSBEiJ_T0046806.1 MGP_WSBEiJ_G0023057.1 mouse_genomes_project 17 45862062 46198611 + MGP_WSBEiJ_P0046806 Supt3 protein_coding protein_coding MGP_WSBEiJ_T0045497.1 MGP_WSBEiJ_G0022711.1 mouse_genomes_project 17 26655264 26660116 - MGP_WSBEiJ_P0045497 Rps10 protein_coding protein_coding MGP_WSBEiJ_T0045498.1 MGP_WSBEiJ_G0022711.1 mouse_genomes_project 17 26655266 26661459 - MGP_WSBEiJ_P0045498 Rps10 protein_coding protein_coding MGP_WSBEiJ_T0045499.1 MGP_WSBEiJ_G0022711.1 mouse_genomes_project 17 26655267 26660080 - MGP_WSBEiJ_P0045499 Rps10 protein_coding protein_coding MGP_WSBEiJ_T0045500.1 MGP_WSBEiJ_G0022711.1 mouse_genomes_project 17 26655307 26659318 - MGP_WSBEiJ_P0045500 Rps10 protein_coding protein_coding MGP_WSBEiJ_T0045501.1 MGP_WSBEiJ_G0022711.1 mouse_genomes_project 17 26655872 26660116 - Rps10 protein_coding processed_transcript MGP_WSBEiJ_T0045502.1 MGP_WSBEiJ_G0022711.1 mouse_genomes_project 17 26656504 26659097 - Rps10 protein_coding retained_intron MGP_WSBEiJ_T0045503.1 MGP_WSBEiJ_G0022711.1 mouse_genomes_project 17 26656800 26660069 - Rps10 protein_coding retained_intron MGP_WSBEiJ_T0045504.1 MGP_WSBEiJ_G0022711.1 mouse_genomes_project 17 26658997 26660084 - Rps10 protein_coding processed_transcript MGP_WSBEiJ_T0046862.1 MGP_WSBEiJ_G0023070.1 mouse_genomes_project 17 46795394 46809312 + protein_coding processed_transcript MGP_WSBEiJ_T0099255.1 MGP_WSBEiJ_G0037918.1 mouse_genomes_project 17 76668584 76668727 + Gm24475 snoRNA snoRNA MGP_WSBEiJ_T0046864.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47152840 47170970 - MGP_WSBEiJ_P0046864 Vegfa protein_coding protein_coding MGP_WSBEiJ_T0046865.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47152840 47170416 - MGP_WSBEiJ_P0046865 Vegfa protein_coding protein_coding MGP_WSBEiJ_T0046866.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47152843 47170978 - MGP_WSBEiJ_P0046866 Vegfa protein_coding protein_coding MGP_WSBEiJ_T0046867.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47155639 47163463 - Vegfa protein_coding retained_intron MGP_WSBEiJ_T0046868.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47157141 47170970 - MGP_WSBEiJ_P0046868 Vegfa protein_coding protein_coding MGP_WSBEiJ_T0046869.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47157204 47163480 - Vegfa protein_coding retained_intron MGP_WSBEiJ_T0046870.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47157310 47159971 - Vegfa protein_coding retained_intron MGP_WSBEiJ_T0046871.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47157429 47169957 - MGP_WSBEiJ_P0046871 Vegfa protein_coding protein_coding MGP_WSBEiJ_T0046872.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47157431 47163401 - Vegfa protein_coding retained_intron MGP_WSBEiJ_T0046873.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47157456 47169957 - MGP_WSBEiJ_P0046873 Vegfa protein_coding protein_coding MGP_WSBEiJ_T0046874.1 MGP_WSBEiJ_G0023072.1 mouse_genomes_project 17 47163794 47169957 - Vegfa protein_coding retained_intron MGP_WSBEiJ_T0047301.1 MGP_WSBEiJ_G0023203.1 mouse_genomes_project 17 58399297 58413582 - MGP_WSBEiJ_P0047301 Lonp1 protein_coding protein_coding MGP_WSBEiJ_T0098004.1 MGP_WSBEiJ_G0036667.1 mouse_genomes_project 17 52446186 52446304 - Gm25177 snRNA snRNA MGP_WSBEiJ_T0045822.1 MGP_WSBEiJ_G0022785.1 mouse_genomes_project 17 31504367 31556849 - MGP_WSBEiJ_P0045822 Notch3 protein_coding protein_coding MGP_WSBEiJ_T0003710.1 MGP_WSBEiJ_G0003337.1 mouse_genomes_project 17 73328219 73352068 + Gm28727 antisense antisense MGP_WSBEiJ_T0047054.1 MGP_WSBEiJ_G0023126.1 mouse_genomes_project 17 48992059 48998381 - MGP_WSBEiJ_P0047054 protein_coding protein_coding MGP_WSBEiJ_T0047055.1 MGP_WSBEiJ_G0023126.1 mouse_genomes_project 17 48992059 48999371 - MGP_WSBEiJ_P0047055 protein_coding protein_coding MGP_WSBEiJ_T0047056.1 MGP_WSBEiJ_G0023126.1 mouse_genomes_project 17 48992161 48997801 - protein_coding retained_intron MGP_WSBEiJ_T0047058.1 MGP_WSBEiJ_G0023126.1 mouse_genomes_project 17 48993120 48998308 - MGP_WSBEiJ_P0047058 protein_coding protein_coding MGP_WSBEiJ_T0047059.1 MGP_WSBEiJ_G0023126.1 mouse_genomes_project 17 48999120 49001638 - protein_coding retained_intron MGP_WSBEiJ_T0006829.1 MGP_WSBEiJ_G0005625.1 mouse_genomes_project 17 28668076 28700896 - Gm26885 lincRNA lincRNA MGP_WSBEiJ_T0045730.1 MGP_WSBEiJ_G0022760.1 mouse_genomes_project 17 29072350 29137083 - MGP_WSBEiJ_P0045730 Mdga1 protein_coding protein_coding MGP_WSBEiJ_T0045731.1 MGP_WSBEiJ_G0022760.1 mouse_genomes_project 17 29072352 29136335 - MGP_WSBEiJ_P0045731 Mdga1 protein_coding protein_coding MGP_WSBEiJ_T0045732.1 MGP_WSBEiJ_G0022760.1 mouse_genomes_project 17 29076438 29087600 - Mdga1 protein_coding retained_intron MGP_WSBEiJ_T0045733.1 MGP_WSBEiJ_G0022760.1 mouse_genomes_project 17 29076648 29079770 - Mdga1 protein_coding processed_transcript MGP_WSBEiJ_T0045734.1 MGP_WSBEiJ_G0022760.1 mouse_genomes_project 17 29076665 29084329 - MGP_WSBEiJ_P0045734 Mdga1 protein_coding protein_coding MGP_WSBEiJ_T0045735.1 MGP_WSBEiJ_G0022760.1 mouse_genomes_project 17 29087297 29225304 - MGP_WSBEiJ_P0045735 Mdga1 protein_coding protein_coding MGP_WSBEiJ_T0045736.1 MGP_WSBEiJ_G0022760.1 mouse_genomes_project 17 29094823 29135935 - MGP_WSBEiJ_P0045736 Mdga1 protein_coding protein_coding MGP_WSBEiJ_T0045737.1 MGP_WSBEiJ_G0022760.1 mouse_genomes_project 17 29095700 29138349 - Mdga1 protein_coding processed_transcript MGP_WSBEiJ_T0047164.1 MGP_WSBEiJ_G0023151.1 mouse_genomes_project 17 51472773 51683337 - MGP_WSBEiJ_P0047164 Rftn1 protein_coding protein_coding MGP_WSBEiJ_T0047165.1 MGP_WSBEiJ_G0023151.1 mouse_genomes_project 17 51524294 51683210 - Rftn1 protein_coding retained_intron MGP_WSBEiJ_T0044853.1 MGP_WSBEiJ_G0022550.1 mouse_genomes_project 17 22230066 22239029 - MGP_WSBEiJ_P0044853 Zfp213 protein_coding protein_coding MGP_WSBEiJ_T0098008.1 MGP_WSBEiJ_G0036671.1 mouse_genomes_project 17 62432768 62432931 + Gm23447 snRNA snRNA MGP_WSBEiJ_T0047442.1 MGP_WSBEiJ_G0023264.1 mouse_genomes_project 17 70159378 70331453 - MGP_WSBEiJ_P0047442 Arhgap28 protein_coding protein_coding MGP_WSBEiJ_T0047443.1 MGP_WSBEiJ_G0023264.1 mouse_genomes_project 17 70161774 70273265 - MGP_WSBEiJ_P0047443 Arhgap28 protein_coding protein_coding MGP_WSBEiJ_T0047444.1 MGP_WSBEiJ_G0023264.1 mouse_genomes_project 17 70162399 70222783 - MGP_WSBEiJ_P0047444 Arhgap28 protein_coding protein_coding MGP_WSBEiJ_T0047445.1 MGP_WSBEiJ_G0023264.1 mouse_genomes_project 17 70176353 70193996 - MGP_WSBEiJ_P0047445 Arhgap28 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047446.1 MGP_WSBEiJ_G0023264.1 mouse_genomes_project 17 70189913 70216658 - MGP_WSBEiJ_P0047446 Arhgap28 protein_coding protein_coding MGP_WSBEiJ_T0044899.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22483098 22503319 + MGP_WSBEiJ_P0044899 Srrm2 protein_coding protein_coding MGP_WSBEiJ_T0044900.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22498000 22520961 + MGP_WSBEiJ_P0044900 Srrm2 protein_coding protein_coding MGP_WSBEiJ_T0044901.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22498034 22520966 + MGP_WSBEiJ_P0044901 Srrm2 protein_coding protein_coding MGP_WSBEiJ_T0044902.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22502720 22506031 + MGP_WSBEiJ_P0044902 Srrm2 protein_coding protein_coding MGP_WSBEiJ_T0044903.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22502900 22503511 + Srrm2 protein_coding retained_intron MGP_WSBEiJ_T0044904.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22507906 22508836 + MGP_WSBEiJ_P0044904 Srrm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044905.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22508134 22512728 + Srrm2 protein_coding retained_intron MGP_WSBEiJ_T0044906.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22515543 22518764 + Srrm2 protein_coding processed_transcript MGP_WSBEiJ_T0044907.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22517622 22518896 + MGP_WSBEiJ_P0044907 Srrm2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0044908.1 MGP_WSBEiJ_G0022566.1 mouse_genomes_project 17 22519756 22520559 + Srrm2 protein_coding retained_intron MGP_WSBEiJ_T0045282.1 MGP_WSBEiJ_G0022663.1 mouse_genomes_project 17 24683156 24690447 - MGP_WSBEiJ_P0045282 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003682.1 MGP_WSBEiJ_G0003316.1 mouse_genomes_project 17 35670045 35676148 + Gm4577 antisense antisense MGP_WSBEiJ_T0047781.1 MGP_WSBEiJ_G0023382.1 mouse_genomes_project 17 92019441 92055622 + MGP_WSBEiJ_P0047781 Ston1 protein_coding protein_coding MGP_WSBEiJ_T0047782.1 MGP_WSBEiJ_G0023382.1 mouse_genomes_project 17 92019453 92065768 + Ston1 protein_coding processed_transcript MGP_WSBEiJ_T0047783.1 MGP_WSBEiJ_G0023382.1 mouse_genomes_project 17 92045254 92066170 + MGP_WSBEiJ_P0047783 Ston1 protein_coding protein_coding MGP_WSBEiJ_T0047784.1 MGP_WSBEiJ_G0023382.1 mouse_genomes_project 17 92045254 92070171 + MGP_WSBEiJ_P0047784 Ston1 protein_coding protein_coding MGP_WSBEiJ_T0047785.1 MGP_WSBEiJ_G0023382.1 mouse_genomes_project 17 92045308 92084063 + MGP_WSBEiJ_P0047785 Ston1 protein_coding protein_coding MGP_WSBEiJ_T0047786.1 MGP_WSBEiJ_G0023382.1 mouse_genomes_project 17 92045532 92057332 + Ston1 protein_coding retained_intron MGP_WSBEiJ_T0047787.1 MGP_WSBEiJ_G0023382.1 mouse_genomes_project 17 92046063 92057431 + Ston1 protein_coding retained_intron MGP_WSBEiJ_T0006840.1 MGP_WSBEiJ_G0005634.1 mouse_genomes_project 17 33843000 33844337 + Gm20506 lincRNA lincRNA MGP_WSBEiJ_T0047324.1 MGP_WSBEiJ_G0023219.1 mouse_genomes_project 17 58825910 58833871 - MGP_WSBEiJ_P0047324 Gtf2f1 protein_coding protein_coding MGP_WSBEiJ_T0046445.1 MGP_WSBEiJ_G0022929.1 mouse_genomes_project 17 35556383 35613392 + MGP_WSBEiJ_P0046445 Sfta2 protein_coding protein_coding MGP_WSBEiJ_T0046446.1 MGP_WSBEiJ_G0022929.1 mouse_genomes_project 17 35556412 35613390 + Sfta2 protein_coding processed_transcript MGP_WSBEiJ_T0046449.1 MGP_WSBEiJ_G0022929.1 mouse_genomes_project 17 35612532 35613396 + MGP_WSBEiJ_P0046449 Sfta2 protein_coding protein_coding MGP_WSBEiJ_T0098007.1 MGP_WSBEiJ_G0036670.1 mouse_genomes_project 17 61423336 61423443 - Gm23203 snRNA snRNA MGP_WSBEiJ_T0099257.1 MGP_WSBEiJ_G0037920.1 mouse_genomes_project 17 86309478 86309613 + Gm24240 snoRNA snoRNA MGP_WSBEiJ_T0044932.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22811981 22882503 - MGP_WSBEiJ_P0044932 Pdpk1 protein_coding protein_coding MGP_WSBEiJ_T0044933.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22811989 22882596 - MGP_WSBEiJ_P0044933 Pdpk1 protein_coding protein_coding MGP_WSBEiJ_T0044934.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22814119 22882613 - MGP_WSBEiJ_P0044934 Pdpk1 protein_coding protein_coding MGP_WSBEiJ_T0044935.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22826754 22833630 - Pdpk1 protein_coding processed_transcript MGP_WSBEiJ_T0044936.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22830157 22892200 - Pdpk1 protein_coding processed_transcript MGP_WSBEiJ_T0044937.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22844001 22882599 - Pdpk1 protein_coding retained_intron MGP_WSBEiJ_T0044938.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22846846 22880271 - MGP_WSBEiJ_P0044938 Pdpk1 protein_coding protein_coding MGP_WSBEiJ_T0044939.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22846898 22860700 - MGP_WSBEiJ_P0044939 Pdpk1 protein_coding protein_coding MGP_WSBEiJ_T0044940.1 MGP_WSBEiJ_G0022578.1 mouse_genomes_project 17 22850909 22882171 - MGP_WSBEiJ_P0044940 Pdpk1 protein_coding protein_coding MGP_WSBEiJ_T0047821.1 MGP_WSBEiJ_G0023389.1 mouse_genomes_project 17 98329300 98354590 - MGP_WSBEiJ_P0047821 Mettl4 protein_coding protein_coding MGP_WSBEiJ_T0046281.1 MGP_WSBEiJ_G0022889.1 mouse_genomes_project 17 34747022 34752857 + MGP_WSBEiJ_P0046281 Gm20481 protein_coding protein_coding MGP_WSBEiJ_T0010055.1 MGP_WSBEiJ_G0008212.1 mouse_genomes_project 17 58190612 58190676 - Mir6977 miRNA miRNA MGP_WSBEiJ_T0046118.1 MGP_WSBEiJ_G0022856.1 mouse_genomes_project 17 33902983 33913396 + MGP_WSBEiJ_P0046118 H2-Eb1 protein_coding protein_coding MGP_WSBEiJ_T0046106.1 MGP_WSBEiJ_G0022852.1 mouse_genomes_project 17 33815330 33818693 - MGP_WSBEiJ_P0046106 Gm15821 protein_coding protein_coding MGP_WSBEiJ_T0045743.1 MGP_WSBEiJ_G0022765.1 mouse_genomes_project 17 30195475 30230570 + MGP_WSBEiJ_P0045743 Glp1r protein_coding protein_coding MGP_WSBEiJ_T0046704.1 MGP_WSBEiJ_G0023001.1 mouse_genomes_project 17 38163821 38165939 + MGP_WSBEiJ_P0046704 protein_coding protein_coding MGP_WSBEiJ_T0044849.1 MGP_WSBEiJ_G0022549.1 mouse_genomes_project 17 21804572 21824700 - MGP_WSBEiJ_P0044849 Zfp40 protein_coding protein_coding MGP_WSBEiJ_T0044850.1 MGP_WSBEiJ_G0022549.1 mouse_genomes_project 17 21804600 21824710 - Zfp40 protein_coding processed_transcript MGP_WSBEiJ_T0044851.1 MGP_WSBEiJ_G0022549.1 mouse_genomes_project 17 21807992 21824751 - Zfp40 protein_coding processed_transcript MGP_WSBEiJ_T0044852.1 MGP_WSBEiJ_G0022549.1 mouse_genomes_project 17 21822845 21824752 - MGP_WSBEiJ_P0044852 Zfp40 protein_coding protein_coding MGP_WSBEiJ_T0010018.1 MGP_WSBEiJ_G0008175.1 mouse_genomes_project 17 23379721 23379815 + Gm24589 miRNA miRNA MGP_WSBEiJ_T0006866.1 MGP_WSBEiJ_G0005653.1 mouse_genomes_project 17 56092247 56112146 - 1700025K24Rik lincRNA lincRNA MGP_WSBEiJ_T0045823.1 MGP_WSBEiJ_G0022786.1 mouse_genomes_project 17 31574889 31581663 - MGP_WSBEiJ_P0045823 Ephx3 protein_coding protein_coding MGP_WSBEiJ_T0045824.1 MGP_WSBEiJ_G0022786.1 mouse_genomes_project 17 31576933 31581749 - MGP_WSBEiJ_P0045824 Ephx3 protein_coding protein_coding MGP_WSBEiJ_T0045704.1 MGP_WSBEiJ_G0022755.1 mouse_genomes_project 17 28773484 28832014 + MGP_WSBEiJ_P0045704 Tbc1d22b protein_coding protein_coding MGP_WSBEiJ_T0045705.1 MGP_WSBEiJ_G0022755.1 mouse_genomes_project 17 28796684 28832013 + Tbc1d22b protein_coding retained_intron MGP_WSBEiJ_T0044666.1 MGP_WSBEiJ_G0022464.1 mouse_genomes_project 17 11166887 11534959 + MGP_WSBEiJ_P0044666 protein_coding protein_coding MGP_WSBEiJ_T0047050.1 MGP_WSBEiJ_G0023124.1 mouse_genomes_project 17 48990188 48991726 - MGP_WSBEiJ_P0047050 Tomm6 protein_coding protein_coding MGP_WSBEiJ_T0047052.1 MGP_WSBEiJ_G0023124.1 mouse_genomes_project 17 48990282 48991929 - Tomm6 protein_coding retained_intron MGP_WSBEiJ_T0047053.1 MGP_WSBEiJ_G0023124.1 mouse_genomes_project 17 48990282 48991611 - MGP_WSBEiJ_P0047053 Tomm6 protein_coding protein_coding MGP_WSBEiJ_T0047511.1 MGP_WSBEiJ_G0023277.1 mouse_genomes_project 17 73762598 73823460 - MGP_WSBEiJ_P0047511 Emilin2 protein_coding protein_coding MGP_WSBEiJ_T0100241.1 MGP_WSBEiJ_G0038782.1 mouse_genomes_project 17 74068988 74100220 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100242.1 MGP_WSBEiJ_G0038782.1 mouse_genomes_project 17 74071154 74085744 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0047418.1 MGP_WSBEiJ_G0023256.1 mouse_genomes_project 17 68323446 68334589 + MGP_WSBEiJ_P0047418 Wash1 protein_coding protein_coding MGP_WSBEiJ_T0047419.1 MGP_WSBEiJ_G0023256.1 mouse_genomes_project 17 68323545 68334589 + MGP_WSBEiJ_P0047419 Wash1 protein_coding protein_coding MGP_WSBEiJ_T0046448.1 MGP_WSBEiJ_G0022931.1 mouse_genomes_project 17 35597200 35606402 - MGP_WSBEiJ_P0046448 Dpcr1 protein_coding protein_coding MGP_WSBEiJ_T0045507.1 MGP_WSBEiJ_G0022713.1 mouse_genomes_project 17 26747456 26762029 - MGP_WSBEiJ_P0045507 Spdef protein_coding protein_coding MGP_WSBEiJ_T0045508.1 MGP_WSBEiJ_G0022713.1 mouse_genomes_project 17 26747551 26762030 - MGP_WSBEiJ_P0045508 Spdef protein_coding protein_coding MGP_WSBEiJ_T0045509.1 MGP_WSBEiJ_G0022713.1 mouse_genomes_project 17 26747553 26761968 - MGP_WSBEiJ_P0045509 Spdef protein_coding protein_coding MGP_WSBEiJ_T0045510.1 MGP_WSBEiJ_G0022713.1 mouse_genomes_project 17 26747609 26750680 - Spdef protein_coding processed_transcript MGP_WSBEiJ_T0045511.1 MGP_WSBEiJ_G0022713.1 mouse_genomes_project 17 26753087 26762003 - MGP_WSBEiJ_P0045511 Spdef protein_coding protein_coding MGP_WSBEiJ_T0046933.1 MGP_WSBEiJ_G0023085.1 mouse_genomes_project 17 47536311 47570359 + MGP_WSBEiJ_P0046933 Zfp318 protein_coding protein_coding MGP_WSBEiJ_T0046934.1 MGP_WSBEiJ_G0023085.1 mouse_genomes_project 17 47536331 47576902 + MGP_WSBEiJ_P0046934 Zfp318 protein_coding protein_coding MGP_WSBEiJ_T0046935.1 MGP_WSBEiJ_G0023085.1 mouse_genomes_project 17 47552391 47566263 + MGP_WSBEiJ_P0046935 Zfp318 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046936.1 MGP_WSBEiJ_G0023085.1 mouse_genomes_project 17 47561418 47564906 + Zfp318 protein_coding retained_intron MGP_WSBEiJ_T0046937.1 MGP_WSBEiJ_G0023085.1 mouse_genomes_project 17 47565173 47566866 + Zfp318 protein_coding retained_intron MGP_WSBEiJ_T0046748.1 MGP_WSBEiJ_G0023034.1 mouse_genomes_project 17 41787801 41794525 - MGP_WSBEiJ_P0046748 9130008F23Rik protein_coding protein_coding MGP_WSBEiJ_T0016949.1 MGP_WSBEiJ_G0014756.1 mouse_genomes_project 17 8672931 8691987 + Gm16169 processed_transcript antisense MGP_WSBEiJ_T0016950.1 MGP_WSBEiJ_G0014756.1 mouse_genomes_project 17 8672936 8681676 + Gm16169 processed_transcript retained_intron MGP_WSBEiJ_T0045428.1 MGP_WSBEiJ_G0022693.1 mouse_genomes_project 17 25645587 25713787 + MGP_WSBEiJ_P0045428 Crebrf protein_coding protein_coding MGP_WSBEiJ_T0045429.1 MGP_WSBEiJ_G0022693.1 mouse_genomes_project 17 25645592 25679971 + MGP_WSBEiJ_P0045429 Crebrf protein_coding protein_coding MGP_WSBEiJ_T0045430.1 MGP_WSBEiJ_G0022693.1 mouse_genomes_project 17 25645647 25701685 + MGP_WSBEiJ_P0045430 Crebrf protein_coding protein_coding MGP_WSBEiJ_T0045431.1 MGP_WSBEiJ_G0022693.1 mouse_genomes_project 17 25645661 25699722 + MGP_WSBEiJ_P0045431 Crebrf protein_coding protein_coding MGP_WSBEiJ_T0045432.1 MGP_WSBEiJ_G0022693.1 mouse_genomes_project 17 25679995 25695607 + Crebrf protein_coding retained_intron MGP_WSBEiJ_T0045433.1 MGP_WSBEiJ_G0022693.1 mouse_genomes_project 17 25695134 25697343 + Crebrf protein_coding retained_intron MGP_WSBEiJ_T0012957.1 MGP_WSBEiJ_G0011087.1 mouse_genomes_project 17 55733721 55734682 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006802.1 MGP_WSBEiJ_G0005604.1 mouse_genomes_project 17 15129903 15130764 + lincRNA lincRNA MGP_WSBEiJ_T0003628.1 MGP_WSBEiJ_G0003282.1 mouse_genomes_project 17 5345959 5426912 - antisense antisense MGP_WSBEiJ_T0003629.1 MGP_WSBEiJ_G0003282.1 mouse_genomes_project 17 5394122 5426321 - antisense antisense MGP_WSBEiJ_T0003630.1 MGP_WSBEiJ_G0003282.1 mouse_genomes_project 17 5397073 5426838 - antisense antisense MGP_WSBEiJ_T0047388.1 MGP_WSBEiJ_G0023248.1 mouse_genomes_project 17 67769066 67804938 - MGP_WSBEiJ_P0047388 Vapa protein_coding protein_coding MGP_WSBEiJ_T0047157.1 MGP_WSBEiJ_G0023150.1 mouse_genomes_project 17 51068288 51216532 + Kif6 protein_coding retained_intron MGP_WSBEiJ_T0047158.1 MGP_WSBEiJ_G0023150.1 mouse_genomes_project 17 51068291 51132743 + MGP_WSBEiJ_P0047158 Kif6 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047159.1 MGP_WSBEiJ_G0023150.1 mouse_genomes_project 17 51068324 51384855 + MGP_WSBEiJ_P0047159 Kif6 protein_coding protein_coding MGP_WSBEiJ_T0047160.1 MGP_WSBEiJ_G0023150.1 mouse_genomes_project 17 51172377 51216532 + Kif6 protein_coding retained_intron MGP_WSBEiJ_T0047161.1 MGP_WSBEiJ_G0023150.1 mouse_genomes_project 17 51198410 51216534 + Kif6 protein_coding retained_intron MGP_WSBEiJ_T0047162.1 MGP_WSBEiJ_G0023150.1 mouse_genomes_project 17 51215053 51220180 + Kif6 protein_coding retained_intron MGP_WSBEiJ_T0047163.1 MGP_WSBEiJ_G0023150.1 mouse_genomes_project 17 51359367 51384855 + Kif6 protein_coding retained_intron MGP_WSBEiJ_T0045517.1 MGP_WSBEiJ_G0022716.1 mouse_genomes_project 17 26905531 26957301 + MGP_WSBEiJ_P0045517 Uhrf1bp1 protein_coding protein_coding MGP_WSBEiJ_T0045518.1 MGP_WSBEiJ_G0022716.1 mouse_genomes_project 17 26906284 26937190 + Uhrf1bp1 protein_coding processed_transcript MGP_WSBEiJ_T0045519.1 MGP_WSBEiJ_G0022716.1 mouse_genomes_project 17 26947315 26952546 + Uhrf1bp1 protein_coding processed_transcript MGP_WSBEiJ_T0046747.1 MGP_WSBEiJ_G0023033.1 mouse_genomes_project 17 41720428 41753924 + MGP_WSBEiJ_P0046747 Rhag protein_coding protein_coding MGP_WSBEiJ_T0006862.1 MGP_WSBEiJ_G0005651.1 mouse_genomes_project 17 51732511 51740950 + AY702103 lincRNA lincRNA MGP_WSBEiJ_T0006863.1 MGP_WSBEiJ_G0005651.1 mouse_genomes_project 17 51732707 51734828 + AY702103 lincRNA lincRNA MGP_WSBEiJ_T0006825.1 MGP_WSBEiJ_G0005624.1 mouse_genomes_project 17 28281084 28304672 + Gm16194 lincRNA lincRNA MGP_WSBEiJ_T0006826.1 MGP_WSBEiJ_G0005624.1 mouse_genomes_project 17 28281109 28304678 + Gm16194 lincRNA lincRNA MGP_WSBEiJ_T0006827.1 MGP_WSBEiJ_G0005624.1 mouse_genomes_project 17 28281120 28287990 + Gm16194 lincRNA lincRNA MGP_WSBEiJ_T0006828.1 MGP_WSBEiJ_G0005624.1 mouse_genomes_project 17 28281138 28304790 + Gm16194 lincRNA lincRNA MGP_WSBEiJ_T0006892.1 MGP_WSBEiJ_G0005671.1 mouse_genomes_project 17 90801540 90815352 + Gm28676 lincRNA lincRNA MGP_WSBEiJ_T0000949.1 MGP_WSBEiJ_G0000885.1 mouse_genomes_project 17 9130005 9135005 + TEC TEC MGP_WSBEiJ_T0047343.1 MGP_WSBEiJ_G0023228.1 mouse_genomes_project 17 58999802 59003584 - MGP_WSBEiJ_P0047343 Cd70 protein_coding protein_coding MGP_WSBEiJ_T0047652.1 MGP_WSBEiJ_G0023331.1 mouse_genomes_project 17 83214568 83222846 + MGP_WSBEiJ_P0047652 Morn2 protein_coding protein_coding MGP_WSBEiJ_T0044693.1 MGP_WSBEiJ_G0022471.1 mouse_genomes_project 17 12924796 13032438 - MGP_WSBEiJ_P0044693 Wdr27 protein_coding protein_coding MGP_WSBEiJ_T0046731.1 MGP_WSBEiJ_G0023021.1 mouse_genomes_project 17 39586824 39587532 - MGP_WSBEiJ_P0046731 Gm21903 protein_coding protein_coding MGP_WSBEiJ_T0046353.1 MGP_WSBEiJ_G0022905.1 mouse_genomes_project 17 34902435 34903920 - MGP_WSBEiJ_P0046353 Ly6g5b protein_coding protein_coding MGP_WSBEiJ_T0046354.1 MGP_WSBEiJ_G0022905.1 mouse_genomes_project 17 34902469 34903920 - MGP_WSBEiJ_P0046354 Ly6g5b protein_coding protein_coding MGP_WSBEiJ_T0044998.1 MGP_WSBEiJ_G0022593.1 mouse_genomes_project 17 23249095 23250681 + MGP_WSBEiJ_P0044998 Bricd5 protein_coding protein_coding MGP_WSBEiJ_T0044999.1 MGP_WSBEiJ_G0022593.1 mouse_genomes_project 17 23249178 23250599 + MGP_WSBEiJ_P0044999 Bricd5 protein_coding protein_coding MGP_WSBEiJ_T0045515.1 MGP_WSBEiJ_G0022715.1 mouse_genomes_project 17 26884063 26899091 + MGP_WSBEiJ_P0045515 Snrpc protein_coding protein_coding MGP_WSBEiJ_T0045516.1 MGP_WSBEiJ_G0022715.1 mouse_genomes_project 17 26884223 26899095 + Snrpc protein_coding retained_intron MGP_WSBEiJ_T0047246.1 MGP_WSBEiJ_G0023187.1 mouse_genomes_project 17 57914016 57926711 + MGP_WSBEiJ_P0047246 Tnfaip8l1 protein_coding protein_coding MGP_WSBEiJ_T0047214.1 MGP_WSBEiJ_G0023173.1 mouse_genomes_project 17 57693586 57698644 + MGP_WSBEiJ_P0047214 Ebi3 protein_coding protein_coding MGP_WSBEiJ_T0045413.1 MGP_WSBEiJ_G0022689.1 mouse_genomes_project 17 25332192 25359126 + MGP_WSBEiJ_P0045413 Neurl1b protein_coding protein_coding MGP_WSBEiJ_T0045414.1 MGP_WSBEiJ_G0022689.1 mouse_genomes_project 17 25332192 25359126 + MGP_WSBEiJ_P0045414 Neurl1b protein_coding protein_coding MGP_WSBEiJ_T0045415.1 MGP_WSBEiJ_G0022689.1 mouse_genomes_project 17 25332273 25363673 + MGP_WSBEiJ_P0045415 Neurl1b protein_coding protein_coding MGP_WSBEiJ_T0010052.1 MGP_WSBEiJ_G0008209.1 mouse_genomes_project 17 50533642 50533787 - Gm44304 miRNA miRNA MGP_WSBEiJ_T0100653.1 MGP_WSBEiJ_G0039111.1 mouse_genomes_project 17 36743950 36744171 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046198.1 MGP_WSBEiJ_G0022872.1 mouse_genomes_project 17 34364558 34366119 + MGP_WSBEiJ_P0046198 Fkbpl protein_coding protein_coding MGP_WSBEiJ_T0046199.1 MGP_WSBEiJ_G0022872.1 mouse_genomes_project 17 34364635 34365117 + MGP_WSBEiJ_P0046199 Fkbpl protein_coding protein_coding MGP_WSBEiJ_T0047209.1 MGP_WSBEiJ_G0023168.1 mouse_genomes_project 17 57388520 57451939 - MGP_WSBEiJ_P0047209 Pot1b protein_coding protein_coding MGP_WSBEiJ_T0047634.1 MGP_WSBEiJ_G0023324.1 mouse_genomes_project 17 82730662 82780507 - MGP_WSBEiJ_P0047634 Atl2 protein_coding protein_coding MGP_WSBEiJ_T0047635.1 MGP_WSBEiJ_G0023324.1 mouse_genomes_project 17 82732962 82780505 - MGP_WSBEiJ_P0047635 Atl2 protein_coding protein_coding MGP_WSBEiJ_T0045140.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23910292 23928328 - Telo2 protein_coding retained_intron MGP_WSBEiJ_T0045141.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23910292 23928388 - MGP_WSBEiJ_P0045141 Telo2 protein_coding protein_coding MGP_WSBEiJ_T0045142.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23910299 23928326 - MGP_WSBEiJ_P0045142 Telo2 protein_coding protein_coding MGP_WSBEiJ_T0045143.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23910339 23914385 - Telo2 protein_coding processed_transcript MGP_WSBEiJ_T0045144.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23910347 23917565 - Telo2 protein_coding processed_transcript MGP_WSBEiJ_T0045145.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23910547 23912168 - Telo2 protein_coding processed_transcript MGP_WSBEiJ_T0045146.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23911498 23918882 - Telo2 protein_coding retained_intron MGP_WSBEiJ_T0045147.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23921552 23927613 - Telo2 protein_coding processed_transcript MGP_WSBEiJ_T0045148.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23921842 23926070 - Telo2 protein_coding processed_transcript MGP_WSBEiJ_T0045149.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23925623 23927733 - Telo2 protein_coding processed_transcript MGP_WSBEiJ_T0045150.1 MGP_WSBEiJ_G0022627.1 mouse_genomes_project 17 23926558 23928375 - Telo2 protein_coding retained_intron MGP_WSBEiJ_T0045201.1 MGP_WSBEiJ_G0022641.1 mouse_genomes_project 17 24163507 24165790 - MGP_WSBEiJ_P0045201 Tpsab1 protein_coding protein_coding MGP_WSBEiJ_T0045202.1 MGP_WSBEiJ_G0022641.1 mouse_genomes_project 17 24163508 24165825 - Tpsab1 protein_coding processed_transcript MGP_WSBEiJ_T0047101.1 MGP_WSBEiJ_G0023134.1 mouse_genomes_project 17 49474270 49531072 - MGP_WSBEiJ_P0047101 protein_coding protein_coding MGP_WSBEiJ_T0047102.1 MGP_WSBEiJ_G0023134.1 mouse_genomes_project 17 49474271 49531085 - MGP_WSBEiJ_P0047102 protein_coding protein_coding MGP_WSBEiJ_T0047021.1 MGP_WSBEiJ_G0023117.1 mouse_genomes_project 17 48707032 48742100 + MGP_WSBEiJ_P0047021 AI661453 protein_coding protein_coding MGP_WSBEiJ_T0047022.1 MGP_WSBEiJ_G0023117.1 mouse_genomes_project 17 48707222 48742594 + MGP_WSBEiJ_P0047022 AI661453 protein_coding protein_coding MGP_WSBEiJ_T0044712.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615108 13632542 + MGP_WSBEiJ_P0044712 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044713.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615108 13643893 + MGP_WSBEiJ_P0044713 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044714.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615108 13619798 + MGP_WSBEiJ_P0044714 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044715.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615121 13622650 + MGP_WSBEiJ_P0044715 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044716.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615130 13632542 + MGP_WSBEiJ_P0044716 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044717.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615132 13622555 + MGP_WSBEiJ_P0044717 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044718.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615142 13629528 + MGP_WSBEiJ_P0044718 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044719.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615148 13619640 + MGP_WSBEiJ_P0044719 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044720.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13615180 13632542 + MGP_WSBEiJ_P0044720 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044721.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13619775 13631983 + MGP_WSBEiJ_P0044721 Tbp protein_coding protein_coding MGP_WSBEiJ_T0044722.1 MGP_WSBEiJ_G0022478.1 mouse_genomes_project 17 13630639 13632050 + Tbp protein_coding retained_intron MGP_WSBEiJ_T0046610.1 MGP_WSBEiJ_G0022960.1 mouse_genomes_project 17 36863172 36865414 - MGP_WSBEiJ_P0046610 protein_coding protein_coding MGP_WSBEiJ_T0044596.1 MGP_WSBEiJ_G0022440.1 mouse_genomes_project 17 6781220 6803659 + MGP_WSBEiJ_P0044596 1700010I14Rik protein_coding protein_coding MGP_WSBEiJ_T0044597.1 MGP_WSBEiJ_G0022440.1 mouse_genomes_project 17 6781244 6803658 + MGP_WSBEiJ_P0044597 1700010I14Rik protein_coding protein_coding MGP_WSBEiJ_T0044598.1 MGP_WSBEiJ_G0022440.1 mouse_genomes_project 17 6781270 6800589 + 1700010I14Rik protein_coding processed_transcript MGP_WSBEiJ_T0047208.1 MGP_WSBEiJ_G0023167.1 mouse_genomes_project 17 57337654 57367061 - MGP_WSBEiJ_P0047208 Vmn2r118 protein_coding protein_coding MGP_WSBEiJ_T0010038.1 MGP_WSBEiJ_G0008195.1 mouse_genomes_project 17 33586084 33586144 + Mir219c miRNA miRNA MGP_WSBEiJ_T0046761.1 MGP_WSBEiJ_G0023043.1 mouse_genomes_project 17 43986260 44063208 + MGP_WSBEiJ_P0046761 Tnfrsf21 protein_coding protein_coding MGP_WSBEiJ_T0006876.1 MGP_WSBEiJ_G0005659.1 mouse_genomes_project 17 73200276 73211697 - 5031415H12Rik lincRNA lincRNA MGP_WSBEiJ_T0046276.1 MGP_WSBEiJ_G0022886.1 mouse_genomes_project 17 34707628 34712284 + MGP_WSBEiJ_P0046276 Neu1 protein_coding protein_coding MGP_WSBEiJ_T0046277.1 MGP_WSBEiJ_G0022886.1 mouse_genomes_project 17 34707689 34712310 + Neu1 protein_coding retained_intron MGP_WSBEiJ_T0046278.1 MGP_WSBEiJ_G0022886.1 mouse_genomes_project 17 34708238 34709141 + Neu1 protein_coding retained_intron MGP_WSBEiJ_T0045459.1 MGP_WSBEiJ_G0022700.1 mouse_genomes_project 17 25934641 25937680 + MGP_WSBEiJ_P0045459 Zbtb9 protein_coding protein_coding MGP_WSBEiJ_T0097986.1 MGP_WSBEiJ_G0036649.1 mouse_genomes_project 17 13972382 13972489 - Gm25598 snRNA snRNA MGP_WSBEiJ_T0045594.1 MGP_WSBEiJ_G0022728.1 mouse_genomes_project 17 27507734 27603616 - MGP_WSBEiJ_P0045594 Fkbp5 protein_coding protein_coding MGP_WSBEiJ_T0045595.1 MGP_WSBEiJ_G0022728.1 mouse_genomes_project 17 27507736 27635883 - MGP_WSBEiJ_P0045595 Fkbp5 protein_coding protein_coding MGP_WSBEiJ_T0045596.1 MGP_WSBEiJ_G0022728.1 mouse_genomes_project 17 27507744 27635883 - MGP_WSBEiJ_P0045596 Fkbp5 protein_coding protein_coding MGP_WSBEiJ_T0045597.1 MGP_WSBEiJ_G0022728.1 mouse_genomes_project 17 27511321 27541247 - Fkbp5 protein_coding processed_transcript MGP_WSBEiJ_T0045598.1 MGP_WSBEiJ_G0022728.1 mouse_genomes_project 17 27527568 27554357 - MGP_WSBEiJ_P0045598 Fkbp5 protein_coding protein_coding MGP_WSBEiJ_T0045599.1 MGP_WSBEiJ_G0022728.1 mouse_genomes_project 17 27614807 27624966 - Fkbp5 protein_coding retained_intron MGP_WSBEiJ_T0100665.1 MGP_WSBEiJ_G0039123.1 mouse_genomes_project 17 37727940 37728865 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0045040.1 MGP_WSBEiJ_G0022602.1 mouse_genomes_project 17 23458408 23472872 + MGP_WSBEiJ_P0045040 Zfp598 protein_coding protein_coding MGP_WSBEiJ_T0044743.1 MGP_WSBEiJ_G0022484.1 mouse_genomes_project 17 15575663 15639006 + MGP_WSBEiJ_P0044743 Lix1 protein_coding protein_coding MGP_WSBEiJ_T0044744.1 MGP_WSBEiJ_G0022484.1 mouse_genomes_project 17 15627171 15639006 + Lix1 protein_coding processed_transcript MGP_WSBEiJ_T0011613.1 MGP_WSBEiJ_G0009760.1 mouse_genomes_project 17 35119399 35120966 + polymorphic_pseudogene retained_intron MGP_WSBEiJ_T0046169.1 MGP_WSBEiJ_G0022867.1 mouse_genomes_project 17 34314698 34317078 - MGP_WSBEiJ_P0046169 Rnf5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046170.1 MGP_WSBEiJ_G0022867.1 mouse_genomes_project 17 34314912 34316981 - Rnf5 protein_coding retained_intron MGP_WSBEiJ_T0046171.1 MGP_WSBEiJ_G0022867.1 mouse_genomes_project 17 34315380 34317266 - Rnf5 protein_coding retained_intron MGP_WSBEiJ_T0099232.1 MGP_WSBEiJ_G0037895.1 mouse_genomes_project 17 10842113 10842241 + Snora20 snoRNA snoRNA MGP_WSBEiJ_T0006794.1 MGP_WSBEiJ_G0005597.1 mouse_genomes_project 17 6950990 6972501 - 6530411M01Rik lincRNA lincRNA MGP_WSBEiJ_T0044694.1 MGP_WSBEiJ_G0022472.1 mouse_genomes_project 17 13040697 13043451 + MGP_WSBEiJ_P0044694 1600012H06Rik protein_coding protein_coding MGP_WSBEiJ_T0044695.1 MGP_WSBEiJ_G0022472.1 mouse_genomes_project 17 13040743 13043449 + MGP_WSBEiJ_P0044695 1600012H06Rik protein_coding protein_coding MGP_WSBEiJ_T0044696.1 MGP_WSBEiJ_G0022472.1 mouse_genomes_project 17 13040782 13042501 + MGP_WSBEiJ_P0044696 1600012H06Rik protein_coding protein_coding MGP_WSBEiJ_T0044697.1 MGP_WSBEiJ_G0022472.1 mouse_genomes_project 17 13040784 13059591 + 1600012H06Rik protein_coding processed_transcript MGP_WSBEiJ_T0046739.1 MGP_WSBEiJ_G0023029.1 mouse_genomes_project 17 41467202 41485962 + MGP_WSBEiJ_P0046739 protein_coding protein_coding MGP_WSBEiJ_T0047066.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49052084 49108040 + MGP_WSBEiJ_P0047066 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047067.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49052654 49101698 + MGP_WSBEiJ_P0047067 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047068.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49052982 49108036 + MGP_WSBEiJ_P0047068 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047069.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49053957 49104684 + MGP_WSBEiJ_P0047069 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047070.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49070125 49101698 + MGP_WSBEiJ_P0047070 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047071.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49074960 49101810 + MGP_WSBEiJ_P0047071 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047072.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49078955 49101911 + MGP_WSBEiJ_P0047072 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047073.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49084957 49101913 + MGP_WSBEiJ_P0047073 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047074.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49084957 49101915 + MGP_WSBEiJ_P0047074 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047075.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49098488 49101991 + MGP_WSBEiJ_P0047075 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047076.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49101333 49108036 + MGP_WSBEiJ_P0047076 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047077.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49101768 49108037 + MGP_WSBEiJ_P0047077 Tfeb protein_coding protein_coding MGP_WSBEiJ_T0047078.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49103181 49105330 + Tfeb protein_coding processed_transcript MGP_WSBEiJ_T0047079.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49103523 49104552 + Tfeb protein_coding retained_intron MGP_WSBEiJ_T0047080.1 MGP_WSBEiJ_G0023129.1 mouse_genomes_project 17 49105054 49107234 + Tfeb protein_coding retained_intron MGP_WSBEiJ_T0044891.1 MGP_WSBEiJ_G0022562.1 mouse_genomes_project 17 22424909 22429057 - MGP_WSBEiJ_P0044891 Paqr4 protein_coding protein_coding MGP_WSBEiJ_T0010017.1 MGP_WSBEiJ_G0008174.1 mouse_genomes_project 17 22995332 22995395 - Mir6965 miRNA miRNA MGP_WSBEiJ_T0044841.1 MGP_WSBEiJ_G0022545.1 mouse_genomes_project 17 21317455 21317626 + MGP_WSBEiJ_P0044841 Gm9805 protein_coding protein_coding MGP_WSBEiJ_T0100610.1 MGP_WSBEiJ_G0039068.1 mouse_genomes_project 17 17024551 17024677 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047057.1 MGP_WSBEiJ_G0023127.1 mouse_genomes_project 17 48992572 49006416 + MGP_WSBEiJ_P0047057 Frs3 protein_coding protein_coding MGP_WSBEiJ_T0047060.1 MGP_WSBEiJ_G0023127.1 mouse_genomes_project 17 49002099 49011151 + MGP_WSBEiJ_P0047060 Frs3 protein_coding protein_coding MGP_WSBEiJ_T0047061.1 MGP_WSBEiJ_G0023127.1 mouse_genomes_project 17 49002126 49004571 + Frs3 protein_coding processed_transcript MGP_WSBEiJ_T0047062.1 MGP_WSBEiJ_G0023127.1 mouse_genomes_project 17 49006423 49007740 + Frs3 protein_coding processed_transcript MGP_WSBEiJ_T0047063.1 MGP_WSBEiJ_G0023127.1 mouse_genomes_project 17 49008929 49011149 + Frs3 protein_coding processed_transcript MGP_WSBEiJ_T0045265.1 MGP_WSBEiJ_G0022657.1 mouse_genomes_project 17 24639164 24640947 - MGP_WSBEiJ_P0045265 Fam173a protein_coding protein_coding MGP_WSBEiJ_T0011222.1 MGP_WSBEiJ_G0009379.1 mouse_genomes_project 17 31398216 31398487 + Gm25883 misc_RNA misc_RNA MGP_WSBEiJ_T0044885.1 MGP_WSBEiJ_G0022560.1 mouse_genomes_project 17 22388235 22410283 - 1520401A03Rik protein_coding retained_intron MGP_WSBEiJ_T0044886.1 MGP_WSBEiJ_G0022560.1 mouse_genomes_project 17 22388235 22410283 - MGP_WSBEiJ_P0044886 1520401A03Rik protein_coding protein_coding MGP_WSBEiJ_T0044887.1 MGP_WSBEiJ_G0022560.1 mouse_genomes_project 17 22388235 22408217 - MGP_WSBEiJ_P0044887 1520401A03Rik protein_coding protein_coding MGP_WSBEiJ_T0044888.1 MGP_WSBEiJ_G0022560.1 mouse_genomes_project 17 22388805 22409440 - 1520401A03Rik protein_coding retained_intron MGP_WSBEiJ_T0044889.1 MGP_WSBEiJ_G0022560.1 mouse_genomes_project 17 22388805 22390071 - 1520401A03Rik protein_coding retained_intron MGP_WSBEiJ_T0045060.1 MGP_WSBEiJ_G0022608.1 mouse_genomes_project 17 23520272 23522004 + MGP_WSBEiJ_P0045060 protein_coding protein_coding MGP_WSBEiJ_T0045061.1 MGP_WSBEiJ_G0022608.1 mouse_genomes_project 17 23521507 23522000 + protein_coding retained_intron MGP_WSBEiJ_T0046508.1 MGP_WSBEiJ_G0022940.1 mouse_genomes_project 17 35836679 35848925 + MGP_WSBEiJ_P0046508 Ppp1r18 protein_coding protein_coding MGP_WSBEiJ_T0046509.1 MGP_WSBEiJ_G0022940.1 mouse_genomes_project 17 35836711 35848826 + MGP_WSBEiJ_P0046509 Ppp1r18 protein_coding protein_coding MGP_WSBEiJ_T0046510.1 MGP_WSBEiJ_G0022940.1 mouse_genomes_project 17 35837142 35848930 + MGP_WSBEiJ_P0046510 Ppp1r18 protein_coding protein_coding MGP_WSBEiJ_T0046511.1 MGP_WSBEiJ_G0022940.1 mouse_genomes_project 17 35837701 35848930 + MGP_WSBEiJ_P0046511 Ppp1r18 protein_coding protein_coding MGP_WSBEiJ_T0046512.1 MGP_WSBEiJ_G0022940.1 mouse_genomes_project 17 35837746 35848921 + MGP_WSBEiJ_P0046512 Ppp1r18 protein_coding protein_coding MGP_WSBEiJ_T0046513.1 MGP_WSBEiJ_G0022940.1 mouse_genomes_project 17 35839489 35848928 + MGP_WSBEiJ_P0046513 Ppp1r18 protein_coding protein_coding MGP_WSBEiJ_T0045039.1 MGP_WSBEiJ_G0022601.1 mouse_genomes_project 17 23441844 23442982 - MGP_WSBEiJ_P0045039 Npw protein_coding protein_coding MGP_WSBEiJ_T0010045.1 MGP_WSBEiJ_G0008202.1 mouse_genomes_project 17 35062174 35062291 + Mir8094 miRNA miRNA MGP_WSBEiJ_T0047667.1 MGP_WSBEiJ_G0023341.1 mouse_genomes_project 17 84419563 84419724 + MGP_WSBEiJ_P0047667 Gm11096 protein_coding protein_coding MGP_WSBEiJ_T0012936.1 MGP_WSBEiJ_G0011066.1 mouse_genomes_project 17 37434826 37435493 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044786.1 MGP_WSBEiJ_G0022512.1 mouse_genomes_project 17 19096836 19097868 - MGP_WSBEiJ_P0044786 Fpr-rs3 protein_coding protein_coding MGP_WSBEiJ_T0044775.1 MGP_WSBEiJ_G0022501.1 mouse_genomes_project 17 16508742 16539387 + MGP_WSBEiJ_P0044775 Vmn2r93 protein_coding protein_coding MGP_WSBEiJ_T0046084.1 MGP_WSBEiJ_G0022846.1 mouse_genomes_project 17 33726065 33739383 + MGP_WSBEiJ_P0046084 protein_coding protein_coding MGP_WSBEiJ_T0006800.1 MGP_WSBEiJ_G0005602.1 mouse_genomes_project 17 13337326 13346525 - Gm5091 lincRNA lincRNA MGP_WSBEiJ_T0012902.1 MGP_WSBEiJ_G0011032.1 mouse_genomes_project 17 6545904 6546460 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100627.1 MGP_WSBEiJ_G0039085.1 mouse_genomes_project 17 21798059 21798710 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046751.1 MGP_WSBEiJ_G0023037.1 mouse_genomes_project 17 41853602 41880668 + MGP_WSBEiJ_P0046751 Mut protein_coding protein_coding MGP_WSBEiJ_T0010021.1 MGP_WSBEiJ_G0008178.1 mouse_genomes_project 17 24629469 24629541 + Mir6966 miRNA miRNA MGP_WSBEiJ_T0003646.1 MGP_WSBEiJ_G0003289.1 mouse_genomes_project 17 22461450 22467321 + Gm16275 antisense antisense MGP_WSBEiJ_T0046730.1 MGP_WSBEiJ_G0023020.1 mouse_genomes_project 17 39582482 39584315 + MGP_WSBEiJ_P0046730 Esp24 protein_coding protein_coding MGP_WSBEiJ_T0047185.1 MGP_WSBEiJ_G0023156.1 mouse_genomes_project 17 54181526 54570692 + MGP_WSBEiJ_P0047185 Kcnh8 protein_coding protein_coding MGP_WSBEiJ_T0047186.1 MGP_WSBEiJ_G0023156.1 mouse_genomes_project 17 54540289 54569877 + Kcnh8 protein_coding retained_intron MGP_WSBEiJ_T0044672.1 MGP_WSBEiJ_G0022466.1 mouse_genomes_project 17 11532014 11534380 + MGP_WSBEiJ_P0044672 protein_coding protein_coding MGP_WSBEiJ_T0044691.1 MGP_WSBEiJ_G0022469.1 mouse_genomes_project 17 12359698 12487590 + MGP_WSBEiJ_P0044691 Smoc2 protein_coding protein_coding MGP_WSBEiJ_T0012911.1 MGP_WSBEiJ_G0011041.1 mouse_genomes_project 17 13039465 13040204 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044783.1 MGP_WSBEiJ_G0022509.1 mouse_genomes_project 17 18793071 18822595 + MGP_WSBEiJ_P0044783 Vmn2r107 protein_coding protein_coding MGP_WSBEiJ_T0003661.1 MGP_WSBEiJ_G0003302.1 mouse_genomes_project 17 28803075 28821429 - Tbc1d22bos antisense antisense MGP_WSBEiJ_T0003662.1 MGP_WSBEiJ_G0003302.1 mouse_genomes_project 17 28812761 28821403 - Tbc1d22bos antisense antisense MGP_WSBEiJ_T0003654.1 MGP_WSBEiJ_G0003296.1 mouse_genomes_project 17 26660182 26661692 + Gm15420 antisense antisense MGP_WSBEiJ_T0046561.1 MGP_WSBEiJ_G0022946.1 mouse_genomes_project 17 35939289 35952124 - MGP_WSBEiJ_P0046561 Abcf1 protein_coding protein_coding MGP_WSBEiJ_T0046562.1 MGP_WSBEiJ_G0022946.1 mouse_genomes_project 17 35939755 35940953 - Abcf1 protein_coding retained_intron MGP_WSBEiJ_T0046563.1 MGP_WSBEiJ_G0022946.1 mouse_genomes_project 17 35939769 35940655 - Abcf1 protein_coding retained_intron MGP_WSBEiJ_T0046564.1 MGP_WSBEiJ_G0022946.1 mouse_genomes_project 17 35940537 35941933 - Abcf1 protein_coding retained_intron MGP_WSBEiJ_T0046565.1 MGP_WSBEiJ_G0022946.1 mouse_genomes_project 17 35941136 35942081 - Abcf1 protein_coding retained_intron MGP_WSBEiJ_T0046566.1 MGP_WSBEiJ_G0022946.1 mouse_genomes_project 17 35944167 35946636 - Abcf1 protein_coding retained_intron MGP_WSBEiJ_T0046567.1 MGP_WSBEiJ_G0022946.1 mouse_genomes_project 17 35946102 35951722 - MGP_WSBEiJ_P0046567 Abcf1 protein_coding protein_coding MGP_WSBEiJ_T0046568.1 MGP_WSBEiJ_G0022946.1 mouse_genomes_project 17 35946617 35952124 - MGP_WSBEiJ_P0046568 Abcf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012917.1 MGP_WSBEiJ_G0011047.1 mouse_genomes_project 17 22757340 22757848 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044552.1 MGP_WSBEiJ_G0022429.1 mouse_genomes_project 17 5632192 5672627 - MGP_WSBEiJ_P0044552 protein_coding protein_coding MGP_WSBEiJ_T0044553.1 MGP_WSBEiJ_G0022429.1 mouse_genomes_project 17 5649490 5672674 - MGP_WSBEiJ_P0044553 protein_coding protein_coding MGP_WSBEiJ_T0045797.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30961526 30986900 - MGP_WSBEiJ_P0045797 Cbs protein_coding protein_coding MGP_WSBEiJ_T0045798.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30961543 30986866 - MGP_WSBEiJ_P0045798 Cbs protein_coding protein_coding MGP_WSBEiJ_T0045799.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30961544 30986866 - MGP_WSBEiJ_P0045799 Cbs protein_coding protein_coding MGP_WSBEiJ_T0045800.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30966068 30966777 - Cbs protein_coding retained_intron MGP_WSBEiJ_T0045801.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30969877 30975081 - Cbs protein_coding processed_transcript MGP_WSBEiJ_T0045802.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30970402 30971991 - Cbs protein_coding processed_transcript MGP_WSBEiJ_T0045803.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30973995 30986491 - MGP_WSBEiJ_P0045803 Cbs protein_coding protein_coding MGP_WSBEiJ_T0045804.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30974049 30986350 - MGP_WSBEiJ_P0045804 Cbs protein_coding protein_coding MGP_WSBEiJ_T0045805.1 MGP_WSBEiJ_G0022779.1 mouse_genomes_project 17 30976423 30986350 - MGP_WSBEiJ_P0045805 Cbs protein_coding protein_coding MGP_WSBEiJ_T0099251.1 MGP_WSBEiJ_G0037914.1 mouse_genomes_project 17 74183679 74183764 + Snord92 snoRNA snoRNA MGP_WSBEiJ_T0099239.1 MGP_WSBEiJ_G0037902.1 mouse_genomes_project 17 34726924 34726990 - Snord52 snoRNA snoRNA MGP_WSBEiJ_T0096988.1 MGP_WSBEiJ_G0035669.1 mouse_genomes_project 17 3305603 3305725 + n-R5s26 rRNA rRNA MGP_WSBEiJ_T0045754.1 MGP_WSBEiJ_G0022772.1 mouse_genomes_project 17 30517724 30554812 + MGP_WSBEiJ_P0045754 Ubash3a protein_coding protein_coding MGP_WSBEiJ_T0045755.1 MGP_WSBEiJ_G0022772.1 mouse_genomes_project 17 30517931 30527821 + MGP_WSBEiJ_P0045755 Ubash3a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045756.1 MGP_WSBEiJ_G0022772.1 mouse_genomes_project 17 30517940 30524564 + MGP_WSBEiJ_P0045756 Ubash3a protein_coding protein_coding MGP_WSBEiJ_T0045757.1 MGP_WSBEiJ_G0022772.1 mouse_genomes_project 17 30522810 30554812 + Ubash3a protein_coding processed_transcript MGP_WSBEiJ_T0045758.1 MGP_WSBEiJ_G0022772.1 mouse_genomes_project 17 30522994 30529572 + Ubash3a protein_coding processed_transcript MGP_WSBEiJ_T0047440.1 MGP_WSBEiJ_G0023262.1 mouse_genomes_project 17 69942862 69944621 - MGP_WSBEiJ_P0047440 Lrrc30 protein_coding protein_coding MGP_WSBEiJ_T0003666.1 MGP_WSBEiJ_G0003304.1 mouse_genomes_project 17 32264518 32265716 + Gm17115 antisense antisense MGP_WSBEiJ_T0012944.1 MGP_WSBEiJ_G0011074.1 mouse_genomes_project 17 38362201 38362695 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012928.1 MGP_WSBEiJ_G0011058.1 mouse_genomes_project 17 35923481 35923779 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100614.1 MGP_WSBEiJ_G0039072.1 mouse_genomes_project 17 18361255 18362155 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0006836.1 MGP_WSBEiJ_G0005631.1 mouse_genomes_project 17 33450014 33451019 + Platr17 lincRNA lincRNA MGP_WSBEiJ_T0047520.1 MGP_WSBEiJ_G0023279.1 mouse_genomes_project 17 73972998 73974588 - Gm4707 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0047521.1 MGP_WSBEiJ_G0023279.1 mouse_genomes_project 17 73973696 73973970 - MGP_WSBEiJ_P0047521 Gm4707 protein_coding protein_coding MGP_WSBEiJ_T0047522.1 MGP_WSBEiJ_G0023279.1 mouse_genomes_project 17 73974499 73975064 - MGP_WSBEiJ_P0047522 Gm4707 protein_coding protein_coding MGP_WSBEiJ_T0012974.1 MGP_WSBEiJ_G0011104.1 mouse_genomes_project 17 84779412 84779791 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045520.1 MGP_WSBEiJ_G0022717.1 mouse_genomes_project 17 26958210 26970966 - MGP_WSBEiJ_P0045520 Taf11 protein_coding protein_coding MGP_WSBEiJ_T0045521.1 MGP_WSBEiJ_G0022717.1 mouse_genomes_project 17 26958216 26969450 - MGP_WSBEiJ_P0045521 Taf11 protein_coding protein_coding MGP_WSBEiJ_T0045522.1 MGP_WSBEiJ_G0022717.1 mouse_genomes_project 17 26958750 26960354 - Taf11 protein_coding processed_transcript MGP_WSBEiJ_T0046583.1 MGP_WSBEiJ_G0022950.1 mouse_genomes_project 17 36012550 36017026 - MGP_WSBEiJ_P0046583 H2-T23 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046584.1 MGP_WSBEiJ_G0022950.1 mouse_genomes_project 17 36014757 36017026 - MGP_WSBEiJ_P0046584 H2-T23 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046585.1 MGP_WSBEiJ_G0022950.1 mouse_genomes_project 17 36016116 36017087 - H2-T23 protein_coding retained_intron MGP_WSBEiJ_T0047352.1 MGP_WSBEiJ_G0023233.1 mouse_genomes_project 17 59140173 59194159 + MGP_WSBEiJ_P0047352 Vav1 protein_coding protein_coding MGP_WSBEiJ_T0047353.1 MGP_WSBEiJ_G0023233.1 mouse_genomes_project 17 59140173 59194240 + MGP_WSBEiJ_P0047353 Vav1 protein_coding protein_coding MGP_WSBEiJ_T0047354.1 MGP_WSBEiJ_G0023233.1 mouse_genomes_project 17 59140200 59194164 + MGP_WSBEiJ_P0047354 Vav1 protein_coding protein_coding MGP_WSBEiJ_T0047355.1 MGP_WSBEiJ_G0023233.1 mouse_genomes_project 17 59165735 59168916 + Vav1 protein_coding retained_intron MGP_WSBEiJ_T0047356.1 MGP_WSBEiJ_G0023233.1 mouse_genomes_project 17 59175396 59194162 + Vav1 protein_coding processed_transcript MGP_WSBEiJ_T0044473.1 MGP_WSBEiJ_G0022403.1 mouse_genomes_project 17 644013 705011 - MGP_WSBEiJ_P0044473 Nox3 protein_coding protein_coding MGP_WSBEiJ_T0047300.1 MGP_WSBEiJ_G0023202.1 mouse_genomes_project 17 58398673 58399240 + MGP_WSBEiJ_P0047300 Rpl36 protein_coding protein_coding MGP_WSBEiJ_T0046724.1 MGP_WSBEiJ_G0023015.1 mouse_genomes_project 17 38746802 38747742 - MGP_WSBEiJ_P0046724 Olfr137 protein_coding protein_coding MGP_WSBEiJ_T0045825.1 MGP_WSBEiJ_G0022787.1 mouse_genomes_project 17 31588460 31679608 - MGP_WSBEiJ_P0045825 Brd4 protein_coding protein_coding MGP_WSBEiJ_T0045826.1 MGP_WSBEiJ_G0022787.1 mouse_genomes_project 17 31588460 31679596 - MGP_WSBEiJ_P0045826 Brd4 protein_coding protein_coding MGP_WSBEiJ_T0045827.1 MGP_WSBEiJ_G0022787.1 mouse_genomes_project 17 31588462 31679596 - MGP_WSBEiJ_P0045827 Brd4 protein_coding protein_coding MGP_WSBEiJ_T0045828.1 MGP_WSBEiJ_G0022787.1 mouse_genomes_project 17 31589936 31596787 - MGP_WSBEiJ_P0045828 Brd4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0045829.1 MGP_WSBEiJ_G0022787.1 mouse_genomes_project 17 31597092 31679608 - MGP_WSBEiJ_P0045829 Brd4 protein_coding protein_coding MGP_WSBEiJ_T0045830.1 MGP_WSBEiJ_G0022787.1 mouse_genomes_project 17 31598889 31679616 - MGP_WSBEiJ_P0045830 Brd4 protein_coding protein_coding MGP_WSBEiJ_T0045831.1 MGP_WSBEiJ_G0022787.1 mouse_genomes_project 17 31605270 31680183 - MGP_WSBEiJ_P0045831 Brd4 protein_coding protein_coding MGP_WSBEiJ_T0045832.1 MGP_WSBEiJ_G0022787.1 mouse_genomes_project 17 31605305 31680138 - MGP_WSBEiJ_P0045832 Brd4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010016.1 MGP_WSBEiJ_G0008173.1 mouse_genomes_project 17 22989309 22989387 - Mir5134 miRNA miRNA MGP_WSBEiJ_T0016947.1 MGP_WSBEiJ_G0014755.1 mouse_genomes_project 17 6130986 6185014 + T2 processed_transcript processed_transcript MGP_WSBEiJ_T0016948.1 MGP_WSBEiJ_G0014755.1 mouse_genomes_project 17 6158034 6185014 + T2 processed_transcript processed_transcript MGP_WSBEiJ_T0045172.1 MGP_WSBEiJ_G0022634.1 mouse_genomes_project 17 24056714 24062737 - MGP_WSBEiJ_P0045172 Gnptg protein_coding protein_coding MGP_WSBEiJ_T0045173.1 MGP_WSBEiJ_G0022634.1 mouse_genomes_project 17 24057700 24062729 - MGP_WSBEiJ_P0045173 Gnptg protein_coding protein_coding MGP_WSBEiJ_T0100676.1 MGP_WSBEiJ_G0039134.1 mouse_genomes_project 17 55548880 55549420 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046775.1 MGP_WSBEiJ_G0023049.1 mouse_genomes_project 17 44623319 44641132 - MGP_WSBEiJ_P0046775 Tdrd6 protein_coding protein_coding MGP_WSBEiJ_T0046776.1 MGP_WSBEiJ_G0023049.1 mouse_genomes_project 17 44623323 44641132 - MGP_WSBEiJ_P0046776 Tdrd6 protein_coding protein_coding MGP_WSBEiJ_T0046777.1 MGP_WSBEiJ_G0023049.1 mouse_genomes_project 17 44623543 44630399 - Tdrd6 protein_coding processed_transcript MGP_WSBEiJ_T0046778.1 MGP_WSBEiJ_G0023049.1 mouse_genomes_project 17 44623829 44641018 - MGP_WSBEiJ_P0046778 Tdrd6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0100648.1 MGP_WSBEiJ_G0039106.1 mouse_genomes_project 17 36350383 36351522 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046645.1 MGP_WSBEiJ_G0022971.1 mouse_genomes_project 17 37261494 37266729 - H2-M5 protein_coding retained_intron MGP_WSBEiJ_T0046646.1 MGP_WSBEiJ_G0022971.1 mouse_genomes_project 17 37264057 37266696 - MGP_WSBEiJ_P0046646 H2-M5 protein_coding protein_coding MGP_WSBEiJ_T0046647.1 MGP_WSBEiJ_G0022971.1 mouse_genomes_project 17 37264317 37266390 - MGP_WSBEiJ_P0046647 H2-M5 protein_coding protein_coding MGP_WSBEiJ_T0046648.1 MGP_WSBEiJ_G0022971.1 mouse_genomes_project 17 37264317 37266390 - MGP_WSBEiJ_P0046648 H2-M5 protein_coding protein_coding MGP_WSBEiJ_T0046649.1 MGP_WSBEiJ_G0022971.1 mouse_genomes_project 17 37264699 37266247 - MGP_WSBEiJ_P0046649 H2-M5 protein_coding protein_coding MGP_WSBEiJ_T0044814.1 MGP_WSBEiJ_G0022531.1 mouse_genomes_project 17 20055350 20081766 + MGP_WSBEiJ_P0044814 Zfp948 protein_coding protein_coding MGP_WSBEiJ_T0003659.1 MGP_WSBEiJ_G0003301.1 mouse_genomes_project 17 28083251 28098302 + Gm16191 antisense antisense MGP_WSBEiJ_T0003660.1 MGP_WSBEiJ_G0003301.1 mouse_genomes_project 17 28093931 28094589 + Gm16191 antisense antisense MGP_WSBEiJ_T0044483.1 MGP_WSBEiJ_G0022407.1 mouse_genomes_project 17 2603608 2883279 + MGP_WSBEiJ_P0044483 Zdhhc14 protein_coding protein_coding MGP_WSBEiJ_T0046569.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35956967 35965728 - MGP_WSBEiJ_P0046569 Prr3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046570.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35956974 35965461 - MGP_WSBEiJ_P0046570 Prr3 protein_coding protein_coding MGP_WSBEiJ_T0046571.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35956974 35966749 - MGP_WSBEiJ_P0046571 Prr3 protein_coding protein_coding MGP_WSBEiJ_T0046572.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35959195 35966016 - MGP_WSBEiJ_P0046572 Prr3 protein_coding protein_coding MGP_WSBEiJ_T0046573.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35964248 35965938 - MGP_WSBEiJ_P0046573 Prr3 protein_coding protein_coding MGP_WSBEiJ_T0046574.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35964484 35966298 - MGP_WSBEiJ_P0046574 Prr3 protein_coding protein_coding MGP_WSBEiJ_T0046575.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35964652 35966298 - MGP_WSBEiJ_P0046575 Prr3 protein_coding protein_coding MGP_WSBEiJ_T0046576.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35964907 35966169 - MGP_WSBEiJ_P0046576 Prr3 protein_coding protein_coding MGP_WSBEiJ_T0046577.1 MGP_WSBEiJ_G0022947.1 mouse_genomes_project 17 35965018 35965789 - Prr3 protein_coding retained_intron MGP_WSBEiJ_T0047489.1 MGP_WSBEiJ_G0023274.1 mouse_genomes_project 17 73485661 73496928 - MGP_WSBEiJ_P0047489 Myl12a protein_coding protein_coding MGP_WSBEiJ_T0047490.1 MGP_WSBEiJ_G0023274.1 mouse_genomes_project 17 73486301 73496539 - Myl12a protein_coding retained_intron MGP_WSBEiJ_T0047491.1 MGP_WSBEiJ_G0023274.1 mouse_genomes_project 17 73486301 73492392 - MGP_WSBEiJ_P0047491 Myl12a protein_coding protein_coding MGP_WSBEiJ_T0047492.1 MGP_WSBEiJ_G0023274.1 mouse_genomes_project 17 73486556 73497252 - MGP_WSBEiJ_P0047492 Myl12a protein_coding protein_coding MGP_WSBEiJ_T0047493.1 MGP_WSBEiJ_G0023274.1 mouse_genomes_project 17 73488139 73496561 - MGP_WSBEiJ_P0047493 Myl12a protein_coding protein_coding MGP_WSBEiJ_T0047494.1 MGP_WSBEiJ_G0023274.1 mouse_genomes_project 17 73488401 73496534 - Myl12a protein_coding retained_intron MGP_WSBEiJ_T0047495.1 MGP_WSBEiJ_G0023274.1 mouse_genomes_project 17 73488722 73496392 - MGP_WSBEiJ_P0047495 Myl12a protein_coding protein_coding MGP_WSBEiJ_T0012953.1 MGP_WSBEiJ_G0011083.1 mouse_genomes_project 17 55337475 55338242 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045331.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24783497 24795404 - MGP_WSBEiJ_P0045331 Pigq protein_coding protein_coding MGP_WSBEiJ_T0045332.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24783498 24800126 - Pigq protein_coding retained_intron MGP_WSBEiJ_T0045333.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24783498 24800291 - MGP_WSBEiJ_P0045333 Pigq protein_coding protein_coding MGP_WSBEiJ_T0045334.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24783498 24800178 - MGP_WSBEiJ_P0045334 Pigq protein_coding protein_coding MGP_WSBEiJ_T0045335.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24784566 24791405 - MGP_WSBEiJ_P0045335 Pigq protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045336.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24784673 24788311 - Pigq protein_coding retained_intron MGP_WSBEiJ_T0045337.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24784715 24794303 - MGP_WSBEiJ_P0045337 Pigq protein_coding protein_coding MGP_WSBEiJ_T0045338.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24786966 24788051 - Pigq protein_coding retained_intron MGP_WSBEiJ_T0045339.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24790600 24800178 - Pigq protein_coding retained_intron MGP_WSBEiJ_T0045340.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24791682 24800176 - MGP_WSBEiJ_P0045340 Pigq protein_coding protein_coding MGP_WSBEiJ_T0045341.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24794716 24800172 - Pigq protein_coding retained_intron MGP_WSBEiJ_T0045342.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24795322 24801103 - MGP_WSBEiJ_P0045342 Pigq protein_coding protein_coding MGP_WSBEiJ_T0045343.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24795376 24803430 - MGP_WSBEiJ_P0045343 Pigq protein_coding protein_coding MGP_WSBEiJ_T0045344.1 MGP_WSBEiJ_G0022671.1 mouse_genomes_project 17 24795505 24801073 - MGP_WSBEiJ_P0045344 Pigq protein_coding protein_coding MGP_WSBEiJ_T0044703.1 MGP_WSBEiJ_G0022474.1 mouse_genomes_project 17 13156573 13163748 + MGP_WSBEiJ_P0044703 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046754.1 MGP_WSBEiJ_G0023040.1 mouse_genomes_project 17 43579173 43622667 - MGP_WSBEiJ_P0046754 Adgrf4 protein_coding protein_coding MGP_WSBEiJ_T0046755.1 MGP_WSBEiJ_G0023040.1 mouse_genomes_project 17 43579176 43622667 - MGP_WSBEiJ_P0046755 Adgrf4 protein_coding protein_coding MGP_WSBEiJ_T0046756.1 MGP_WSBEiJ_G0023040.1 mouse_genomes_project 17 43579373 43622645 - MGP_WSBEiJ_P0046756 Adgrf4 protein_coding protein_coding MGP_WSBEiJ_T0046757.1 MGP_WSBEiJ_G0023040.1 mouse_genomes_project 17 43597505 43622656 - MGP_WSBEiJ_P0046757 Adgrf4 protein_coding protein_coding MGP_WSBEiJ_T0046705.1 MGP_WSBEiJ_G0023002.1 mouse_genomes_project 17 38163821 38166049 + MGP_WSBEiJ_P0046705 protein_coding protein_coding MGP_WSBEiJ_T0006833.1 MGP_WSBEiJ_G0005628.1 mouse_genomes_project 17 31680247 31697709 + Gm26549 lincRNA lincRNA MGP_WSBEiJ_T0097985.1 MGP_WSBEiJ_G0036648.1 mouse_genomes_project 17 12897824 12897888 - Gm23352 snRNA snRNA MGP_WSBEiJ_T0003696.1 MGP_WSBEiJ_G0003327.1 mouse_genomes_project 17 46770692 46773421 + Gm16172 antisense antisense MGP_WSBEiJ_T0046309.1 MGP_WSBEiJ_G0022894.1 mouse_genomes_project 17 34806677 34809073 - Sapcd1 protein_coding retained_intron MGP_WSBEiJ_T0046310.1 MGP_WSBEiJ_G0022894.1 mouse_genomes_project 17 34806677 34809328 - MGP_WSBEiJ_P0046310 Sapcd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046311.1 MGP_WSBEiJ_G0022894.1 mouse_genomes_project 17 34806695 34809430 - MGP_WSBEiJ_P0046311 Sapcd1 protein_coding protein_coding MGP_WSBEiJ_T0046312.1 MGP_WSBEiJ_G0022894.1 mouse_genomes_project 17 34806983 34809430 - MGP_WSBEiJ_P0046312 Sapcd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045927.1 MGP_WSBEiJ_G0022818.1 mouse_genomes_project 17 33142066 33146306 + MGP_WSBEiJ_P0045927 Zfp414 protein_coding protein_coding MGP_WSBEiJ_T0045928.1 MGP_WSBEiJ_G0022818.1 mouse_genomes_project 17 33142066 33146243 + MGP_WSBEiJ_P0045928 Zfp414 protein_coding protein_coding MGP_WSBEiJ_T0045929.1 MGP_WSBEiJ_G0022818.1 mouse_genomes_project 17 33142077 33145484 + Zfp414 protein_coding retained_intron MGP_WSBEiJ_T0045930.1 MGP_WSBEiJ_G0022818.1 mouse_genomes_project 17 33142097 33145991 + MGP_WSBEiJ_P0045930 Zfp414 protein_coding protein_coding MGP_WSBEiJ_T0045931.1 MGP_WSBEiJ_G0022818.1 mouse_genomes_project 17 33142405 33142981 + MGP_WSBEiJ_P0045931 Zfp414 protein_coding protein_coding MGP_WSBEiJ_T0045932.1 MGP_WSBEiJ_G0022818.1 mouse_genomes_project 17 33145615 33146217 + Zfp414 protein_coding retained_intron MGP_WSBEiJ_T0045676.1 MGP_WSBEiJ_G0022748.1 mouse_genomes_project 17 28450029 28485288 + MGP_WSBEiJ_P0045676 BC004004 protein_coding protein_coding MGP_WSBEiJ_T0045677.1 MGP_WSBEiJ_G0022748.1 mouse_genomes_project 17 28450084 28483928 + MGP_WSBEiJ_P0045677 BC004004 protein_coding protein_coding MGP_WSBEiJ_T0045678.1 MGP_WSBEiJ_G0022748.1 mouse_genomes_project 17 28450192 28466305 + BC004004 protein_coding retained_intron MGP_WSBEiJ_T0045679.1 MGP_WSBEiJ_G0022748.1 mouse_genomes_project 17 28455252 28483932 + MGP_WSBEiJ_P0045679 BC004004 protein_coding protein_coding MGP_WSBEiJ_T0045680.1 MGP_WSBEiJ_G0022748.1 mouse_genomes_project 17 28479713 28483932 + BC004004 protein_coding processed_transcript MGP_WSBEiJ_T0044588.1 MGP_WSBEiJ_G0022439.1 mouse_genomes_project 17 6339504 6340603 - Gm17087 protein_coding translated_processed_pseudogene MGP_WSBEiJ_T0044589.1 MGP_WSBEiJ_G0022439.1 mouse_genomes_project 17 6340051 6340522 - MGP_WSBEiJ_P0044589 Gm17087 protein_coding protein_coding MGP_WSBEiJ_T0099258.1 MGP_WSBEiJ_G0037921.1 mouse_genomes_project 17 90328194 90328326 - Gm24648 snoRNA snoRNA MGP_WSBEiJ_T0045996.1 MGP_WSBEiJ_G0022830.1 mouse_genomes_project 17 33460196 33464601 + MGP_WSBEiJ_P0045996 Tapbp protein_coding protein_coding MGP_WSBEiJ_T0045999.1 MGP_WSBEiJ_G0022830.1 mouse_genomes_project 17 33463524 33473486 + MGP_WSBEiJ_P0045999 Tapbp protein_coding protein_coding MGP_WSBEiJ_T0046000.1 MGP_WSBEiJ_G0022830.1 mouse_genomes_project 17 33463704 33464561 + Tapbp protein_coding retained_intron MGP_WSBEiJ_T0046001.1 MGP_WSBEiJ_G0022830.1 mouse_genomes_project 17 33464713 33470396 + Tapbp protein_coding processed_transcript MGP_WSBEiJ_T0046002.1 MGP_WSBEiJ_G0022830.1 mouse_genomes_project 17 33470316 33472476 + Tapbp protein_coding retained_intron MGP_WSBEiJ_T0047548.1 MGP_WSBEiJ_G0023291.1 mouse_genomes_project 17 76140299 76374222 - MGP_WSBEiJ_P0047548 Galnt14 protein_coding protein_coding MGP_WSBEiJ_T0047549.1 MGP_WSBEiJ_G0023291.1 mouse_genomes_project 17 76154608 76374186 - MGP_WSBEiJ_P0047549 Galnt14 protein_coding protein_coding MGP_WSBEiJ_T0047550.1 MGP_WSBEiJ_G0023291.1 mouse_genomes_project 17 76223971 76374224 - Galnt14 protein_coding retained_intron MGP_WSBEiJ_T0045434.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25719040 25731546 + MGP_WSBEiJ_P0045434 Bnip1 protein_coding protein_coding MGP_WSBEiJ_T0045435.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25719043 25723887 + Bnip1 protein_coding retained_intron MGP_WSBEiJ_T0045436.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25719052 25723888 + Bnip1 protein_coding retained_intron MGP_WSBEiJ_T0045437.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25719054 25731206 + MGP_WSBEiJ_P0045437 Bnip1 protein_coding protein_coding MGP_WSBEiJ_T0045438.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25719082 25731545 + MGP_WSBEiJ_P0045438 Bnip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045439.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25719096 25731102 + MGP_WSBEiJ_P0045439 Bnip1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045440.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25719119 25731450 + MGP_WSBEiJ_P0045440 Bnip1 protein_coding protein_coding MGP_WSBEiJ_T0045441.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25725444 25729030 + Bnip1 protein_coding retained_intron MGP_WSBEiJ_T0045442.1 MGP_WSBEiJ_G0022694.1 mouse_genomes_project 17 25729793 25731590 + Bnip1 protein_coding retained_intron MGP_WSBEiJ_T0047633.1 MGP_WSBEiJ_G0023323.1 mouse_genomes_project 17 82569788 82577858 - MGP_WSBEiJ_P0047633 Cyp1b1 protein_coding protein_coding MGP_WSBEiJ_T0100656.1 MGP_WSBEiJ_G0039114.1 mouse_genomes_project 17 36927488 36929069 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047169.1 MGP_WSBEiJ_G0023154.1 mouse_genomes_project 17 52248949 52551608 - MGP_WSBEiJ_P0047169 Tbc1d5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047170.1 MGP_WSBEiJ_G0023154.1 mouse_genomes_project 17 52248955 52718139 - MGP_WSBEiJ_P0047170 Tbc1d5 protein_coding protein_coding MGP_WSBEiJ_T0047303.1 MGP_WSBEiJ_G0023205.1 mouse_genomes_project 17 58471025 58511541 + MGP_WSBEiJ_P0047303 Ranbp3 protein_coding protein_coding MGP_WSBEiJ_T0047304.1 MGP_WSBEiJ_G0023205.1 mouse_genomes_project 17 58471190 58511545 + MGP_WSBEiJ_P0047304 Ranbp3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047619.1 MGP_WSBEiJ_G0023316.1 mouse_genomes_project 17 81754286 81772604 - MGP_WSBEiJ_P0047619 Cebpz protein_coding protein_coding MGP_WSBEiJ_T0099238.1 MGP_WSBEiJ_G0037901.1 mouse_genomes_project 17 29239936 29240044 - Gm22327 snoRNA snoRNA MGP_WSBEiJ_T0045383.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077070 25085636 + Rgs11 protein_coding processed_transcript MGP_WSBEiJ_T0045384.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077077 25085640 + MGP_WSBEiJ_P0045384 Rgs11 protein_coding protein_coding MGP_WSBEiJ_T0045385.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077081 25085645 + MGP_WSBEiJ_P0045385 Rgs11 protein_coding protein_coding MGP_WSBEiJ_T0045386.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077082 25077951 + Rgs11 protein_coding retained_intron MGP_WSBEiJ_T0045387.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077084 25077754 + Rgs11 protein_coding retained_intron MGP_WSBEiJ_T0045388.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077095 25085638 + Rgs11 protein_coding retained_intron MGP_WSBEiJ_T0045389.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077099 25078093 + Rgs11 protein_coding retained_intron MGP_WSBEiJ_T0045390.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077121 25080903 + Rgs11 protein_coding retained_intron MGP_WSBEiJ_T0045391.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25077131 25078215 + Rgs11 protein_coding retained_intron MGP_WSBEiJ_T0045392.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25081550 25085638 + Rgs11 protein_coding retained_intron MGP_WSBEiJ_T0045393.1 MGP_WSBEiJ_G0022684.1 mouse_genomes_project 17 25081938 25085636 + Rgs11 protein_coding retained_intron MGP_WSBEiJ_T0046255.1 MGP_WSBEiJ_G0022883.1 mouse_genomes_project 17 34647789 34665844 + MGP_WSBEiJ_P0046255 Zbtb12 protein_coding protein_coding MGP_WSBEiJ_T0046258.1 MGP_WSBEiJ_G0022883.1 mouse_genomes_project 17 34664955 34667269 + MGP_WSBEiJ_P0046258 Zbtb12 protein_coding protein_coding MGP_WSBEiJ_T0047363.1 MGP_WSBEiJ_G0023238.1 mouse_genomes_project 17 60708484 60713393 - Pdzph1 protein_coding retained_intron MGP_WSBEiJ_T0047364.1 MGP_WSBEiJ_G0023238.1 mouse_genomes_project 17 60708484 60825234 - MGP_WSBEiJ_P0047364 Pdzph1 protein_coding protein_coding MGP_WSBEiJ_T0047365.1 MGP_WSBEiJ_G0023238.1 mouse_genomes_project 17 60708646 60722755 - MGP_WSBEiJ_P0047365 Pdzph1 protein_coding protein_coding MGP_WSBEiJ_T0044788.1 MGP_WSBEiJ_G0022514.1 mouse_genomes_project 17 19248687 19250130 - MGP_WSBEiJ_P0044788 Vmn1r228 protein_coding protein_coding MGP_WSBEiJ_T0044909.1 MGP_WSBEiJ_G0022567.1 mouse_genomes_project 17 22520964 22525269 - MGP_WSBEiJ_P0044909 Tceb2 protein_coding protein_coding MGP_WSBEiJ_T0047819.1 MGP_WSBEiJ_G0023387.1 mouse_genomes_project 17 94586775 94587674 + MGP_WSBEiJ_P0047819 Gm10308 protein_coding protein_coding MGP_WSBEiJ_T0046737.1 MGP_WSBEiJ_G0023027.1 mouse_genomes_project 17 41431464 41440837 + MGP_WSBEiJ_P0046737 Esp8 protein_coding protein_coding MGP_WSBEiJ_T0045151.1 MGP_WSBEiJ_G0022628.1 mouse_genomes_project 17 23932931 23937432 + MGP_WSBEiJ_P0045151 Ptx4 protein_coding protein_coding MGP_WSBEiJ_T0046976.1 MGP_WSBEiJ_G0023098.1 mouse_genomes_project 17 47859519 47865893 - MGP_WSBEiJ_P0046976 Klhdc3 protein_coding protein_coding MGP_WSBEiJ_T0046977.1 MGP_WSBEiJ_G0023098.1 mouse_genomes_project 17 47859522 47865893 - MGP_WSBEiJ_P0046977 Klhdc3 protein_coding protein_coding MGP_WSBEiJ_T0046355.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34904686 34909930 - MGP_WSBEiJ_P0046355 Csnk2b protein_coding protein_coding MGP_WSBEiJ_T0046356.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34904688 34908276 - MGP_WSBEiJ_P0046356 Csnk2b protein_coding protein_coding MGP_WSBEiJ_T0046357.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34904688 34909787 - MGP_WSBEiJ_P0046357 Csnk2b protein_coding protein_coding MGP_WSBEiJ_T0046358.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34904690 34909674 - MGP_WSBEiJ_P0046358 Csnk2b protein_coding protein_coding MGP_WSBEiJ_T0046359.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34904732 34906562 - MGP_WSBEiJ_P0046359 Csnk2b protein_coding protein_coding MGP_WSBEiJ_T0046360.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34906184 34907275 - Csnk2b protein_coding retained_intron MGP_WSBEiJ_T0046361.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34906185 34910554 - MGP_WSBEiJ_P0046361 Csnk2b protein_coding protein_coding MGP_WSBEiJ_T0046362.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34906484 34909531 - MGP_WSBEiJ_P0046362 Csnk2b protein_coding protein_coding MGP_WSBEiJ_T0046363.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34908254 34910499 - MGP_WSBEiJ_P0046363 Csnk2b protein_coding protein_coding MGP_WSBEiJ_T0046364.1 MGP_WSBEiJ_G0022906.1 mouse_genomes_project 17 34909018 34909937 - Csnk2b protein_coding retained_intron MGP_WSBEiJ_T0016954.1 MGP_WSBEiJ_G0014758.1 mouse_genomes_project 17 13161057 13174985 + Gm28869 processed_transcript processed_transcript MGP_WSBEiJ_T0011242.1 MGP_WSBEiJ_G0009399.1 mouse_genomes_project 17 88799010 88799203 + Gm27427 misc_RNA misc_RNA MGP_WSBEiJ_T0046151.1 MGP_WSBEiJ_G0022865.1 mouse_genomes_project 17 34303546 34308852 + MGP_WSBEiJ_P0046151 Pbx2 protein_coding protein_coding MGP_WSBEiJ_T0046152.1 MGP_WSBEiJ_G0022865.1 mouse_genomes_project 17 34304539 34309607 + MGP_WSBEiJ_P0046152 Pbx2 protein_coding protein_coding MGP_WSBEiJ_T0046153.1 MGP_WSBEiJ_G0022865.1 mouse_genomes_project 17 34305003 34308661 + MGP_WSBEiJ_P0046153 Pbx2 protein_coding protein_coding MGP_WSBEiJ_T0046154.1 MGP_WSBEiJ_G0022865.1 mouse_genomes_project 17 34305664 34306647 + MGP_WSBEiJ_P0046154 Pbx2 protein_coding protein_coding MGP_WSBEiJ_T0046155.1 MGP_WSBEiJ_G0022865.1 mouse_genomes_project 17 34307705 34308472 + Pbx2 protein_coding retained_intron MGP_WSBEiJ_T0044665.1 MGP_WSBEiJ_G0022463.1 mouse_genomes_project 17 11166550 11535110 + MGP_WSBEiJ_P0044665 protein_coding protein_coding MGP_WSBEiJ_T0044467.1 MGP_WSBEiJ_G0022399.1 mouse_genomes_project 17 71260 179940 + MGP_WSBEiJ_P0044467 protein_coding protein_coding MGP_WSBEiJ_T0044468.1 MGP_WSBEiJ_G0022399.1 mouse_genomes_project 17 151274 173619 + MGP_WSBEiJ_P0044468 protein_coding unknown_likely_coding MGP_WSBEiJ_T0047705.1 MGP_WSBEiJ_G0023354.1 mouse_genomes_project 17 88103560 88175566 + MGP_WSBEiJ_P0047705 Ppm1b protein_coding protein_coding MGP_WSBEiJ_T0047706.1 MGP_WSBEiJ_G0023354.1 mouse_genomes_project 17 88104820 88166434 + MGP_WSBEiJ_P0047706 Ppm1b protein_coding protein_coding MGP_WSBEiJ_T0047707.1 MGP_WSBEiJ_G0023354.1 mouse_genomes_project 17 88142469 88175566 + MGP_WSBEiJ_P0047707 Ppm1b protein_coding protein_coding MGP_WSBEiJ_T0010062.1 MGP_WSBEiJ_G0008219.1 mouse_genomes_project 17 81099694 81099796 + Gm25069 miRNA miRNA MGP_WSBEiJ_T0003680.1 MGP_WSBEiJ_G0003314.1 mouse_genomes_project 17 35451230 35452633 - Gm19553 antisense antisense MGP_WSBEiJ_T0047115.1 MGP_WSBEiJ_G0023140.1 mouse_genomes_project 17 49734885 49740758 + MGP_WSBEiJ_P0047115 Trem2 protein_coding protein_coding MGP_WSBEiJ_T0047116.1 MGP_WSBEiJ_G0023140.1 mouse_genomes_project 17 49734924 49743394 + Trem2 protein_coding retained_intron MGP_WSBEiJ_T0047117.1 MGP_WSBEiJ_G0023140.1 mouse_genomes_project 17 49734972 49740758 + MGP_WSBEiJ_P0047117 Trem2 protein_coding protein_coding MGP_WSBEiJ_T0047118.1 MGP_WSBEiJ_G0023140.1 mouse_genomes_project 17 49734973 49739043 + Trem2 protein_coding processed_transcript MGP_WSBEiJ_T0044780.1 MGP_WSBEiJ_G0022506.1 mouse_genomes_project 17 18541835 18543617 - MGP_WSBEiJ_P0044780 protein_coding protein_coding MGP_WSBEiJ_T0096990.1 MGP_WSBEiJ_G0035671.1 mouse_genomes_project 17 32282108 32282219 - Gm25555 rRNA rRNA MGP_WSBEiJ_T0045200.1 MGP_WSBEiJ_G0022640.1 mouse_genomes_project 17 24140735 24145712 + MGP_WSBEiJ_P0045200 Prss29 protein_coding protein_coding MGP_WSBEiJ_T0011228.1 MGP_WSBEiJ_G0009385.1 mouse_genomes_project 17 47559442 47559766 + Gm23037 misc_RNA misc_RNA MGP_WSBEiJ_T0012931.1 MGP_WSBEiJ_G0011061.1 mouse_genomes_project 17 36283213 36283757 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0044603.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 8707624 9436660 + Park2 protein_coding retained_intron MGP_WSBEiJ_T0044604.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 8707624 9436660 + Park2 protein_coding retained_intron MGP_WSBEiJ_T0044605.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 8707624 9966574 + MGP_WSBEiJ_P0044605 Park2 protein_coding protein_coding MGP_WSBEiJ_T0044606.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 8707631 8820708 + Park2 protein_coding processed_transcript MGP_WSBEiJ_T0044607.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 8944889 9378057 + MGP_WSBEiJ_P0044607 Park2 protein_coding protein_coding MGP_WSBEiJ_T0044608.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 9182999 9491398 + MGP_WSBEiJ_P0044608 Park2 protein_coding protein_coding MGP_WSBEiJ_T0044609.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 9735608 9765216 + MGP_WSBEiJ_P0044609 Park2 protein_coding protein_coding MGP_WSBEiJ_T0044610.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 9742216 9765216 + Park2 protein_coding processed_transcript MGP_WSBEiJ_T0044611.1 MGP_WSBEiJ_G0022444.1 mouse_genomes_project 17 9931762 9966569 + Park2 protein_coding processed_transcript MGP_WSBEiJ_T0044761.1 MGP_WSBEiJ_G0022488.1 mouse_genomes_project 17 16046240 16058100 - MGP_WSBEiJ_P0044761 Has1 protein_coding protein_coding MGP_WSBEiJ_T0047621.1 MGP_WSBEiJ_G0023318.1 mouse_genomes_project 17 81787530 81864748 - MGP_WSBEiJ_P0047621 Prkd3 protein_coding protein_coding MGP_WSBEiJ_T0047622.1 MGP_WSBEiJ_G0023318.1 mouse_genomes_project 17 81787530 81857169 - MGP_WSBEiJ_P0047622 Prkd3 protein_coding protein_coding MGP_WSBEiJ_T0047623.1 MGP_WSBEiJ_G0023318.1 mouse_genomes_project 17 81788666 81864748 - MGP_WSBEiJ_P0047623 Prkd3 protein_coding protein_coding MGP_WSBEiJ_T0047624.1 MGP_WSBEiJ_G0023318.1 mouse_genomes_project 17 81789754 81852062 - MGP_WSBEiJ_P0047624 Prkd3 protein_coding protein_coding MGP_WSBEiJ_T0047625.1 MGP_WSBEiJ_G0023318.1 mouse_genomes_project 17 81810694 81826437 - Prkd3 protein_coding retained_intron MGP_WSBEiJ_T0047626.1 MGP_WSBEiJ_G0023318.1 mouse_genomes_project 17 81812623 81826437 - MGP_WSBEiJ_P0047626 Prkd3 protein_coding protein_coding MGP_WSBEiJ_T0047627.1 MGP_WSBEiJ_G0023318.1 mouse_genomes_project 17 81813344 81852245 - Prkd3 protein_coding processed_transcript MGP_WSBEiJ_T0047628.1 MGP_WSBEiJ_G0023318.1 mouse_genomes_project 17 81853983 81864709 - Prkd3 protein_coding retained_intron MGP_WSBEiJ_T0099245.1 MGP_WSBEiJ_G0037908.1 mouse_genomes_project 17 50028954 50029086 + Gm24071 snoRNA snoRNA MGP_WSBEiJ_T0046249.1 MGP_WSBEiJ_G0022882.1 mouse_genomes_project 17 34630300 34650284 - MGP_WSBEiJ_P0046249 C2 protein_coding protein_coding MGP_WSBEiJ_T0046250.1 MGP_WSBEiJ_G0022882.1 mouse_genomes_project 17 34630301 34650387 - MGP_WSBEiJ_P0046250 C2 protein_coding protein_coding MGP_WSBEiJ_T0046251.1 MGP_WSBEiJ_G0022882.1 mouse_genomes_project 17 34630302 34665946 - MGP_WSBEiJ_P0046251 C2 protein_coding protein_coding MGP_WSBEiJ_T0046252.1 MGP_WSBEiJ_G0022882.1 mouse_genomes_project 17 34631368 34632114 - MGP_WSBEiJ_P0046252 C2 protein_coding protein_coding MGP_WSBEiJ_T0046253.1 MGP_WSBEiJ_G0022882.1 mouse_genomes_project 17 34631870 34632654 - C2 protein_coding retained_intron MGP_WSBEiJ_T0046254.1 MGP_WSBEiJ_G0022882.1 mouse_genomes_project 17 34645332 34650225 - C2 protein_coding processed_transcript MGP_WSBEiJ_T0046256.1 MGP_WSBEiJ_G0022882.1 mouse_genomes_project 17 34663751 34665956 - C2 protein_coding processed_transcript MGP_WSBEiJ_T0046257.1 MGP_WSBEiJ_G0022882.1 mouse_genomes_project 17 34663754 34668660 - C2 protein_coding processed_transcript MGP_WSBEiJ_T0046752.1 MGP_WSBEiJ_G0023038.1 mouse_genomes_project 17 43211055 43416529 + MGP_WSBEiJ_P0046752 Ptchd4 protein_coding protein_coding MGP_WSBEiJ_T0047536.1 MGP_WSBEiJ_G0023284.1 mouse_genomes_project 17 74300788 74310022 - MGP_WSBEiJ_P0047536 BC027072 protein_coding protein_coding MGP_WSBEiJ_T0003677.1 MGP_WSBEiJ_G0003311.1 mouse_genomes_project 17 34314749 34315175 + Gm20463 antisense antisense MGP_WSBEiJ_T0006816.1 MGP_WSBEiJ_G0005616.1 mouse_genomes_project 17 26187559 26189599 + Gm26724 lincRNA lincRNA MGP_WSBEiJ_T0045896.1 MGP_WSBEiJ_G0022808.1 mouse_genomes_project 17 32577734 32595437 + MGP_WSBEiJ_P0045896 Zfp563 protein_coding protein_coding MGP_WSBEiJ_T0045897.1 MGP_WSBEiJ_G0022808.1 mouse_genomes_project 17 32577988 32593958 + MGP_WSBEiJ_P0045897 Zfp563 protein_coding protein_coding MGP_WSBEiJ_T0045898.1 MGP_WSBEiJ_G0022808.1 mouse_genomes_project 17 32580881 32594292 + MGP_WSBEiJ_P0045898 Zfp563 protein_coding protein_coding MGP_WSBEiJ_T0046949.1 MGP_WSBEiJ_G0023090.1 mouse_genomes_project 17 47661862 47664692 + MGP_WSBEiJ_P0046949 Dnph1 protein_coding protein_coding MGP_WSBEiJ_T0046600.1 MGP_WSBEiJ_G0022957.1 mouse_genomes_project 17 36368228 36378150 - MGP_WSBEiJ_P0046600 Trim39 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046601.1 MGP_WSBEiJ_G0022957.1 mouse_genomes_project 17 36368228 36381400 - MGP_WSBEiJ_P0046601 Trim39 protein_coding protein_coding MGP_WSBEiJ_T0046602.1 MGP_WSBEiJ_G0022957.1 mouse_genomes_project 17 36368228 36380963 - MGP_WSBEiJ_P0046602 Trim39 protein_coding protein_coding MGP_WSBEiJ_T0046603.1 MGP_WSBEiJ_G0022957.1 mouse_genomes_project 17 36368465 36378618 - MGP_WSBEiJ_P0046603 Trim39 protein_coding protein_coding MGP_WSBEiJ_T0046604.1 MGP_WSBEiJ_G0022957.1 mouse_genomes_project 17 36370886 36378093 - Trim39 protein_coding processed_transcript MGP_WSBEiJ_T0046605.1 MGP_WSBEiJ_G0022957.1 mouse_genomes_project 17 36371962 36380779 - Trim39 protein_coding processed_transcript MGP_WSBEiJ_T0046606.1 MGP_WSBEiJ_G0022957.1 mouse_genomes_project 17 36371964 36381643 - Trim39 protein_coding retained_intron MGP_WSBEiJ_T0045175.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24065264 24066642 - Baiap3 protein_coding retained_intron MGP_WSBEiJ_T0045176.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24065264 24078945 - MGP_WSBEiJ_P0045176 Baiap3 protein_coding protein_coding MGP_WSBEiJ_T0045177.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24065963 24076535 - MGP_WSBEiJ_P0045177 Baiap3 protein_coding protein_coding MGP_WSBEiJ_T0045178.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24065978 24066920 - MGP_WSBEiJ_P0045178 Baiap3 protein_coding protein_coding MGP_WSBEiJ_T0045179.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24065987 24078862 - MGP_WSBEiJ_P0045179 Baiap3 protein_coding protein_coding MGP_WSBEiJ_T0045180.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24066130 24078862 - MGP_WSBEiJ_P0045180 Baiap3 protein_coding protein_coding MGP_WSBEiJ_T0045181.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24067399 24068391 - Baiap3 protein_coding retained_intron MGP_WSBEiJ_T0045182.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24068620 24070718 - Baiap3 protein_coding retained_intron MGP_WSBEiJ_T0045183.1 MGP_WSBEiJ_G0022636.1 mouse_genomes_project 17 24073603 24078855 - Baiap3 protein_coding retained_intron MGP_WSBEiJ_T0045944.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33200020 33236581 - MGP_WSBEiJ_P0045944 March2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045945.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33200040 33236556 - MGP_WSBEiJ_P0045945 March2 protein_coding protein_coding MGP_WSBEiJ_T0045946.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33200141 33236556 - MGP_WSBEiJ_P0045946 March2 protein_coding protein_coding MGP_WSBEiJ_T0045947.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33206397 33236564 - MGP_WSBEiJ_P0045947 March2 protein_coding protein_coding MGP_WSBEiJ_T0045948.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33206397 33236551 - MGP_WSBEiJ_P0045948 March2 protein_coding protein_coding MGP_WSBEiJ_T0045949.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33206721 33218053 - MGP_WSBEiJ_P0045949 March2 protein_coding protein_coding MGP_WSBEiJ_T0045950.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33209095 33236568 - MGP_WSBEiJ_P0045950 March2 protein_coding protein_coding MGP_WSBEiJ_T0045951.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33210904 33236502 - MGP_WSBEiJ_P0045951 March2 protein_coding protein_coding MGP_WSBEiJ_T0045952.1 MGP_WSBEiJ_G0022821.1 mouse_genomes_project 17 33217990 33229298 - MGP_WSBEiJ_P0045952 March2 protein_coding protein_coding MGP_WSBEiJ_T0046750.1 MGP_WSBEiJ_G0023036.1 mouse_genomes_project 17 41840223 41853969 - MGP_WSBEiJ_P0046750 Cenpq protein_coding protein_coding MGP_WSBEiJ_T0096998.1 MGP_WSBEiJ_G0035679.1 mouse_genomes_project 17 87042792 87042901 + Gm23905 rRNA rRNA MGP_WSBEiJ_T0044664.1 MGP_WSBEiJ_G0022462.1 mouse_genomes_project 17 11166535 11535114 + MGP_WSBEiJ_P0044664 protein_coding protein_coding MGP_WSBEiJ_T0044667.1 MGP_WSBEiJ_G0022462.1 mouse_genomes_project 17 11173033 11535115 + MGP_WSBEiJ_P0044667 protein_coding protein_coding MGP_WSBEiJ_T0046555.1 MGP_WSBEiJ_G0022945.1 mouse_genomes_project 17 35898260 35899591 + Ppp1r10 protein_coding retained_intron MGP_WSBEiJ_T0046556.1 MGP_WSBEiJ_G0022945.1 mouse_genomes_project 17 35898392 35914000 + MGP_WSBEiJ_P0046556 Ppp1r10 protein_coding protein_coding MGP_WSBEiJ_T0046557.1 MGP_WSBEiJ_G0022945.1 mouse_genomes_project 17 35898405 35899167 + Ppp1r10 protein_coding processed_transcript MGP_WSBEiJ_T0046558.1 MGP_WSBEiJ_G0022945.1 mouse_genomes_project 17 35898608 35900185 + Ppp1r10 protein_coding retained_intron MGP_WSBEiJ_T0046559.1 MGP_WSBEiJ_G0022945.1 mouse_genomes_project 17 35898824 35906124 + MGP_WSBEiJ_P0046559 Ppp1r10 protein_coding protein_coding MGP_WSBEiJ_T0046560.1 MGP_WSBEiJ_G0022945.1 mouse_genomes_project 17 35908318 35909977 + Ppp1r10 protein_coding retained_intron MGP_WSBEiJ_T0047636.1 MGP_WSBEiJ_G0023325.1 mouse_genomes_project 17 82929616 82964508 - MGP_WSBEiJ_P0047636 Hnrnpll protein_coding protein_coding MGP_WSBEiJ_T0047637.1 MGP_WSBEiJ_G0023325.1 mouse_genomes_project 17 82929616 82964615 - MGP_WSBEiJ_P0047637 Hnrnpll protein_coding protein_coding MGP_WSBEiJ_T0047638.1 MGP_WSBEiJ_G0023325.1 mouse_genomes_project 17 82929966 82964508 - MGP_WSBEiJ_P0047638 Hnrnpll protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047639.1 MGP_WSBEiJ_G0023325.1 mouse_genomes_project 17 82930470 82937328 - Hnrnpll protein_coding retained_intron MGP_WSBEiJ_T0047640.1 MGP_WSBEiJ_G0023325.1 mouse_genomes_project 17 82938924 82964475 - Hnrnpll protein_coding retained_intron MGP_WSBEiJ_T0047641.1 MGP_WSBEiJ_G0023325.1 mouse_genomes_project 17 82947607 82964416 - Hnrnpll protein_coding retained_intron MGP_WSBEiJ_T0047642.1 MGP_WSBEiJ_G0023325.1 mouse_genomes_project 17 82953792 82964549 - Hnrnpll protein_coding retained_intron MGP_WSBEiJ_T0046209.1 MGP_WSBEiJ_G0022876.1 mouse_genomes_project 17 34598286 34603403 - MGP_WSBEiJ_P0046209 Stk19 protein_coding unknown_likely_coding MGP_WSBEiJ_T0046210.1 MGP_WSBEiJ_G0022876.1 mouse_genomes_project 17 34598732 34603281 - Stk19 protein_coding retained_intron MGP_WSBEiJ_T0044781.1 MGP_WSBEiJ_G0022507.1 mouse_genomes_project 17 18640301 18668723 - MGP_WSBEiJ_P0044781 Vmn2r105 protein_coding protein_coding MGP_WSBEiJ_T0011233.1 MGP_WSBEiJ_G0009390.1 mouse_genomes_project 17 71995576 71995815 - Gm22967 misc_RNA misc_RNA MGP_WSBEiJ_T0044663.1 MGP_WSBEiJ_G0022461.1 mouse_genomes_project 17 11166534 11535110 + MGP_WSBEiJ_P0044663 protein_coding protein_coding MGP_WSBEiJ_T0044671.1 MGP_WSBEiJ_G0022461.1 mouse_genomes_project 17 11530233 11534406 + MGP_WSBEiJ_P0044671 protein_coding protein_coding MGP_WSBEiJ_T0012970.1 MGP_WSBEiJ_G0011100.1 mouse_genomes_project 17 77891956 77892534 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000966.1 MGP_WSBEiJ_G0000901.1 mouse_genomes_project 17 73878933 73881668 - TEC TEC MGP_WSBEiJ_T0046067.1 MGP_WSBEiJ_G0022843.1 mouse_genomes_project 17 33658119 33660998 + MGP_WSBEiJ_P0046067 H2-Oa protein_coding protein_coding MGP_WSBEiJ_T0046068.1 MGP_WSBEiJ_G0022843.1 mouse_genomes_project 17 33658201 33660997 + H2-Oa protein_coding retained_intron MGP_WSBEiJ_T0006854.1 MGP_WSBEiJ_G0005647.1 mouse_genomes_project 17 47422729 47429285 + Gm26785 lincRNA lincRNA MGP_WSBEiJ_T0000962.1 MGP_WSBEiJ_G0000897.1 mouse_genomes_project 17 53398818 53402072 + TEC TEC MGP_WSBEiJ_T0044995.1 MGP_WSBEiJ_G0022591.1 mouse_genomes_project 17 23245684 23246803 + MGP_WSBEiJ_P0044995 Pgp protein_coding protein_coding MGP_WSBEiJ_T0012938.1 MGP_WSBEiJ_G0011068.1 mouse_genomes_project 17 38117269 38117624 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0100629.1 MGP_WSBEiJ_G0039087.1 mouse_genomes_project 17 25176399 25177099 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0098012.1 MGP_WSBEiJ_G0036675.1 mouse_genomes_project 17 78813682 78813788 + Gm24126 snRNA snRNA MGP_WSBEiJ_T0006799.1 MGP_WSBEiJ_G0005601.1 mouse_genomes_project 17 13165595 13174744 + Gm28873 lincRNA lincRNA MGP_WSBEiJ_T0098021.1 MGP_WSBEiJ_G0036684.1 mouse_genomes_project 17 97957101 97957210 - Gm22593 snRNA snRNA MGP_WSBEiJ_T0044636.1 MGP_WSBEiJ_G0022453.1 mouse_genomes_project 17 10791044 10792853 + MGP_WSBEiJ_P0044636 Mrgprh protein_coding protein_coding MGP_WSBEiJ_T0047014.1 MGP_WSBEiJ_G0023114.1 mouse_genomes_project 17 48648127 48655643 + MGP_WSBEiJ_P0047014 Guca1b protein_coding protein_coding MGP_WSBEiJ_T0047015.1 MGP_WSBEiJ_G0023114.1 mouse_genomes_project 17 48648138 48654769 + MGP_WSBEiJ_P0047015 Guca1b protein_coding protein_coding MGP_WSBEiJ_T0006887.1 MGP_WSBEiJ_G0005669.1 mouse_genomes_project 17 90108388 90109075 + Gm29168 lincRNA lincRNA MGP_WSBEiJ_T0046283.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763204 34765323 + Lsm2 protein_coding retained_intron MGP_WSBEiJ_T0046284.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763222 34767231 + MGP_WSBEiJ_P0046284 Lsm2 protein_coding protein_coding MGP_WSBEiJ_T0046285.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763253 34767011 + Lsm2 protein_coding processed_transcript MGP_WSBEiJ_T0046286.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763463 34766933 + Lsm2 protein_coding processed_transcript MGP_WSBEiJ_T0046287.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763471 34767231 + MGP_WSBEiJ_P0046287 Lsm2 protein_coding protein_coding MGP_WSBEiJ_T0046288.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763501 34767229 + Lsm2 protein_coding processed_transcript MGP_WSBEiJ_T0046289.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763501 34767174 + Lsm2 protein_coding processed_transcript MGP_WSBEiJ_T0046290.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763501 34767229 + MGP_WSBEiJ_P0046290 Lsm2 protein_coding protein_coding MGP_WSBEiJ_T0046291.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763511 34766838 + Lsm2 protein_coding retained_intron MGP_WSBEiJ_T0046292.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34763551 34766838 + Lsm2 protein_coding retained_intron MGP_WSBEiJ_T0046293.1 MGP_WSBEiJ_G0022891.1 mouse_genomes_project 17 34765950 34767230 + Lsm2 protein_coding retained_intron MGP_WSBEiJ_T0047598.1 MGP_WSBEiJ_G0023306.1 mouse_genomes_project 17 80994957 81175601 + MGP_WSBEiJ_P0047598 Crim1 protein_coding protein_coding MGP_WSBEiJ_T0046003.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33473742 33474695 + Rgl2 protein_coding retained_intron MGP_WSBEiJ_T0046004.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33473781 33481930 + MGP_WSBEiJ_P0046004 Rgl2 protein_coding protein_coding MGP_WSBEiJ_T0046005.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33474102 33476412 + Rgl2 protein_coding processed_transcript MGP_WSBEiJ_T0046006.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33474172 33476577 + Rgl2 protein_coding retained_intron MGP_WSBEiJ_T0046007.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33475088 33476235 + Rgl2 protein_coding retained_intron MGP_WSBEiJ_T0046008.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33475097 33476719 + Rgl2 protein_coding processed_transcript MGP_WSBEiJ_T0046009.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33475113 33476152 + Rgl2 protein_coding retained_intron MGP_WSBEiJ_T0046010.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33475415 33476709 + Rgl2 protein_coding retained_intron MGP_WSBEiJ_T0046011.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33476257 33477430 + Rgl2 protein_coding retained_intron MGP_WSBEiJ_T0046012.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33476336 33477353 + Rgl2 protein_coding retained_intron MGP_WSBEiJ_T0046013.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33478137 33481461 + MGP_WSBEiJ_P0046013 Rgl2 protein_coding protein_coding MGP_WSBEiJ_T0046014.1 MGP_WSBEiJ_G0022832.1 mouse_genomes_project 17 33479611 33481127 + Rgl2 protein_coding retained_intron MGP_WSBEiJ_T0100657.1 MGP_WSBEiJ_G0039115.1 mouse_genomes_project 17 36929634 36930063 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0047212.1 MGP_WSBEiJ_G0023171.1 mouse_genomes_project 17 57624370 57632751 + MGP_WSBEiJ_P0047212 Zfp959 protein_coding protein_coding MGP_WSBEiJ_T0100616.1 MGP_WSBEiJ_G0039074.1 mouse_genomes_project 17 18776173 18783559 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0046325.1 MGP_WSBEiJ_G0022896.1 mouse_genomes_project 17 34834428 34845332 + MGP_WSBEiJ_P0046325 Clic1 protein_coding protein_coding MGP_WSBEiJ_T0046326.1 MGP_WSBEiJ_G0022896.1 mouse_genomes_project 17 34838128 34842346 + Clic1 protein_coding retained_intron MGP_WSBEiJ_T0012981.1 MGP_WSBEiJ_G0011111.1 mouse_genomes_project 17 96044891 96046079 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045702.1 MGP_WSBEiJ_G0022754.1 mouse_genomes_project 17 28738011 28773290 - MGP_WSBEiJ_P0045702 Tmem217 protein_coding protein_coding MGP_WSBEiJ_T0045703.1 MGP_WSBEiJ_G0022754.1 mouse_genomes_project 17 28738011 28773290 - MGP_WSBEiJ_P0045703 Tmem217 protein_coding protein_coding MGP_WSBEiJ_T0046514.1 MGP_WSBEiJ_G0022941.1 mouse_genomes_project 17 35853150 35867703 + MGP_WSBEiJ_P0046514 Dhx16 protein_coding protein_coding MGP_WSBEiJ_T0046515.1 MGP_WSBEiJ_G0022941.1 mouse_genomes_project 17 35853156 35867658 + MGP_WSBEiJ_P0046515 Dhx16 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046516.1 MGP_WSBEiJ_G0022941.1 mouse_genomes_project 17 35860996 35862827 + Dhx16 protein_coding retained_intron MGP_WSBEiJ_T0046517.1 MGP_WSBEiJ_G0022941.1 mouse_genomes_project 17 35861168 35861886 + Dhx16 protein_coding retained_intron MGP_WSBEiJ_T0046518.1 MGP_WSBEiJ_G0022941.1 mouse_genomes_project 17 35861174 35861974 + Dhx16 protein_coding retained_intron MGP_WSBEiJ_T0046519.1 MGP_WSBEiJ_G0022941.1 mouse_genomes_project 17 35861258 35862725 + Dhx16 protein_coding retained_intron MGP_WSBEiJ_T0046520.1 MGP_WSBEiJ_G0022941.1 mouse_genomes_project 17 35862513 35867699 + MGP_WSBEiJ_P0046520 Dhx16 protein_coding protein_coding MGP_WSBEiJ_T0046521.1 MGP_WSBEiJ_G0022941.1 mouse_genomes_project 17 35865700 35867586 + Dhx16 protein_coding retained_intron MGP_WSBEiJ_T0046345.1 MGP_WSBEiJ_G0022903.1 mouse_genomes_project 17 34877727 34880293 + Abhd16a protein_coding retained_intron MGP_WSBEiJ_T0046346.1 MGP_WSBEiJ_G0022903.1 mouse_genomes_project 17 34877755 34891495 + MGP_WSBEiJ_P0046346 Abhd16a protein_coding protein_coding MGP_WSBEiJ_T0046347.1 MGP_WSBEiJ_G0022903.1 mouse_genomes_project 17 34877778 34891464 + MGP_WSBEiJ_P0046347 Abhd16a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0046348.1 MGP_WSBEiJ_G0022903.1 mouse_genomes_project 17 34878334 34880433 + Abhd16a protein_coding retained_intron MGP_WSBEiJ_T0046349.1 MGP_WSBEiJ_G0022903.1 mouse_genomes_project 17 34884754 34889442 + Abhd16a protein_coding processed_transcript MGP_WSBEiJ_T0046350.1 MGP_WSBEiJ_G0022903.1 mouse_genomes_project 17 34888452 34889197 + Abhd16a protein_coding retained_intron MGP_WSBEiJ_T0046351.1 MGP_WSBEiJ_G0022903.1 mouse_genomes_project 17 34889355 34890532 + Abhd16a protein_coding retained_intron MGP_WSBEiJ_T0047656.1 MGP_WSBEiJ_G0023334.1 mouse_genomes_project 17 83326236 83419637 - MGP_WSBEiJ_P0047656 Sos1 protein_coding protein_coding MGP_WSBEiJ_T0012959.1 MGP_WSBEiJ_G0011089.1 mouse_genomes_project 17 56913709 56914086 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0045075.1 MGP_WSBEiJ_G0022613.1 mouse_genomes_project 17 23609515 23646230 + MGP_WSBEiJ_P0045075 Meiob protein_coding protein_coding MGP_WSBEiJ_T0045220.1 MGP_WSBEiJ_G0022645.1 mouse_genomes_project 17 24306364 24311367 + MGP_WSBEiJ_P0045220 Tekt4 protein_coding protein_coding MGP_WSBEiJ_T0045100.1 MGP_WSBEiJ_G0022621.1 mouse_genomes_project 17 23702808 23703981 + MGP_WSBEiJ_P0045100 Mrps34 protein_coding protein_coding MGP_WSBEiJ_T0045101.1 MGP_WSBEiJ_G0022621.1 mouse_genomes_project 17 23702815 23705204 + MGP_WSBEiJ_P0045101 Mrps34 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0045102.1 MGP_WSBEiJ_G0022621.1 mouse_genomes_project 17 23702827 23703808 + Mrps34 protein_coding retained_intron MGP_WSBEiJ_T0045255.1 MGP_WSBEiJ_G0022655.1 mouse_genomes_project 17 24628504 24634195 - MGP_WSBEiJ_P0045255 Haghl protein_coding protein_coding MGP_WSBEiJ_T0045256.1 MGP_WSBEiJ_G0022655.1 mouse_genomes_project 17 24631451 24633990 - Haghl protein_coding retained_intron MGP_WSBEiJ_T0045257.1 MGP_WSBEiJ_G0022655.1 mouse_genomes_project 17 24631463 24634187 - Haghl protein_coding retained_intron MGP_WSBEiJ_T0045258.1 MGP_WSBEiJ_G0022655.1 mouse_genomes_project 17 24631475 24634223 - MGP_WSBEiJ_P0045258 Haghl protein_coding protein_coding MGP_WSBEiJ_T0045259.1 MGP_WSBEiJ_G0022655.1 mouse_genomes_project 17 24632201 24634222 - Haghl protein_coding retained_intron MGP_WSBEiJ_T0045260.1 MGP_WSBEiJ_G0022655.1 mouse_genomes_project 17 24632488 24634221 - Haghl protein_coding retained_intron MGP_WSBEiJ_T0045261.1 MGP_WSBEiJ_G0022655.1 mouse_genomes_project 17 24632792 24633960 - Haghl protein_coding retained_intron MGP_WSBEiJ_T0045262.1 MGP_WSBEiJ_G0022655.1 mouse_genomes_project 17 24632975 24634198 - MGP_WSBEiJ_P0045262 Haghl protein_coding protein_coding MGP_WSBEiJ_T0046963.1 MGP_WSBEiJ_G0023095.1 mouse_genomes_project 17 47830862 47835664 + MGP_WSBEiJ_P0046963 Mrpl2 protein_coding protein_coding MGP_WSBEiJ_T0046964.1 MGP_WSBEiJ_G0023095.1 mouse_genomes_project 17 47830876 47833199 + Mrpl2 protein_coding processed_transcript MGP_WSBEiJ_T0046965.1 MGP_WSBEiJ_G0023095.1 mouse_genomes_project 17 47830876 47835670 + MGP_WSBEiJ_P0046965 Mrpl2 protein_coding protein_coding MGP_WSBEiJ_T0046966.1 MGP_WSBEiJ_G0023095.1 mouse_genomes_project 17 47830903 47835671 + MGP_WSBEiJ_P0046966 Mrpl2 protein_coding protein_coding MGP_WSBEiJ_T0046967.1 MGP_WSBEiJ_G0023095.1 mouse_genomes_project 17 47834543 47835530 + Mrpl2 protein_coding processed_transcript MGP_WSBEiJ_T0047742.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90573426 90679386 + MGP_WSBEiJ_P0047742 Ttc7 protein_coding protein_coding MGP_WSBEiJ_T0047743.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90573433 90583482 + Ttc7 protein_coding processed_transcript MGP_WSBEiJ_T0047744.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90573445 90668715 + MGP_WSBEiJ_P0047744 Ttc7 protein_coding protein_coding MGP_WSBEiJ_T0047745.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90573491 90658730 + MGP_WSBEiJ_P0047745 Ttc7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047746.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90583363 90677703 + MGP_WSBEiJ_P0047746 Ttc7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047747.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90600812 90626019 + Ttc7 protein_coding processed_transcript MGP_WSBEiJ_T0047748.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90616230 90631500 + Ttc7 protein_coding retained_intron MGP_WSBEiJ_T0047749.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90626155 90637098 + Ttc7 protein_coding processed_transcript MGP_WSBEiJ_T0047750.1 MGP_WSBEiJ_G0023371.1 mouse_genomes_project 17 90676469 90679386 + Ttc7 protein_coding processed_transcript MGP_WSBEiJ_T0099260.1 MGP_WSBEiJ_G0037923.1 mouse_genomes_project 17 95330127 95330257 - Gm24244 snoRNA snoRNA MGP_WSBEiJ_T0046735.1 MGP_WSBEiJ_G0023025.1 mouse_genomes_project 17 41049073 41105497 - MGP_WSBEiJ_P0046735 Crisp3 protein_coding protein_coding MGP_WSBEiJ_T0044805.1 MGP_WSBEiJ_G0022525.1 mouse_genomes_project 17 19795257 19796207 + MGP_WSBEiJ_P0044805 Vmn1r237 protein_coding protein_coding MGP_WSBEiJ_T0099276.1 MGP_WSBEiJ_G0037939.1 mouse_genomes_project 18 33380793 33380934 + Mir1949 snoRNA snoRNA MGP_WSBEiJ_T0048654.1 MGP_WSBEiJ_G0023696.1 mouse_genomes_project 18 50777915 50779366 + MGP_WSBEiJ_P0048654 Ftmt protein_coding protein_coding MGP_WSBEiJ_T0049184.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82376808 82469963 + MGP_WSBEiJ_P0049184 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049185.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82376810 82417294 + MGP_WSBEiJ_P0049185 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049186.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82376813 82496797 + MGP_WSBEiJ_P0049186 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049187.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82376824 82496798 + MGP_WSBEiJ_P0049187 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049188.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82377032 82495378 + MGP_WSBEiJ_P0049188 Mbp protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049189.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465720 82496798 + MGP_WSBEiJ_P0049189 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049190.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465720 82496798 + MGP_WSBEiJ_P0049190 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049191.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465720 82496798 + MGP_WSBEiJ_P0049191 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049192.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465720 82496798 + MGP_WSBEiJ_P0049192 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049193.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465727 82496788 + MGP_WSBEiJ_P0049193 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049194.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465765 82496798 + MGP_WSBEiJ_P0049194 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049195.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465766 82496792 + MGP_WSBEiJ_P0049195 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049196.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465787 82495317 + MGP_WSBEiJ_P0049196 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049197.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465803 82496798 + MGP_WSBEiJ_P0049197 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049198.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82465840 82496787 + MGP_WSBEiJ_P0049198 Mbp protein_coding protein_coding MGP_WSBEiJ_T0049199.1 MGP_WSBEiJ_G0023870.1 mouse_genomes_project 18 82474484 82495448 + Mbp protein_coding processed_transcript MGP_WSBEiJ_T0048492.1 MGP_WSBEiJ_G0023636.1 mouse_genomes_project 18 36524832 36539763 - MGP_WSBEiJ_P0048492 Spry4 protein_coding protein_coding MGP_WSBEiJ_T0048818.1 MGP_WSBEiJ_G0023765.1 mouse_genomes_project 18 61621782 61634390 + Spink10 protein_coding processed_transcript MGP_WSBEiJ_T0048819.1 MGP_WSBEiJ_G0023765.1 mouse_genomes_project 18 61625343 61636537 + MGP_WSBEiJ_P0048819 Spink10 protein_coding protein_coding MGP_WSBEiJ_T0048820.1 MGP_WSBEiJ_G0023765.1 mouse_genomes_project 18 61625629 61627529 + Spink10 protein_coding processed_transcript MGP_WSBEiJ_T0048821.1 MGP_WSBEiJ_G0023765.1 mouse_genomes_project 18 61625683 61629171 + Spink10 protein_coding processed_transcript MGP_WSBEiJ_T0048879.1 MGP_WSBEiJ_G0023782.1 mouse_genomes_project 18 64948386 64965461 + MGP_WSBEiJ_P0048879 Sec11c protein_coding protein_coding MGP_WSBEiJ_T0048880.1 MGP_WSBEiJ_G0023782.1 mouse_genomes_project 18 64948387 64965452 + MGP_WSBEiJ_P0048880 Sec11c protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048881.1 MGP_WSBEiJ_G0023782.1 mouse_genomes_project 18 64948409 64960524 + MGP_WSBEiJ_P0048881 Sec11c protein_coding protein_coding MGP_WSBEiJ_T0048882.1 MGP_WSBEiJ_G0023782.1 mouse_genomes_project 18 64948440 64965453 + Sec11c protein_coding retained_intron MGP_WSBEiJ_T0048883.1 MGP_WSBEiJ_G0023782.1 mouse_genomes_project 18 64949138 64960574 + Sec11c protein_coding processed_transcript MGP_WSBEiJ_T0048884.1 MGP_WSBEiJ_G0023782.1 mouse_genomes_project 18 64954442 64965456 + Sec11c protein_coding processed_transcript MGP_WSBEiJ_T0048885.1 MGP_WSBEiJ_G0023782.1 mouse_genomes_project 18 64961810 64965456 + Sec11c protein_coding processed_transcript MGP_WSBEiJ_T0048854.1 MGP_WSBEiJ_G0023777.1 mouse_genomes_project 18 63992319 64343471 + MGP_WSBEiJ_P0048854 Nedd4l protein_coding protein_coding MGP_WSBEiJ_T0048855.1 MGP_WSBEiJ_G0023777.1 mouse_genomes_project 18 64261928 64343466 + MGP_WSBEiJ_P0048855 Nedd4l protein_coding protein_coding MGP_WSBEiJ_T0048599.1 MGP_WSBEiJ_G0023676.1 mouse_genomes_project 18 44408625 44456838 - MGP_WSBEiJ_P0048599 Pggt1b protein_coding protein_coding MGP_WSBEiJ_T0098043.1 MGP_WSBEiJ_G0036706.1 mouse_genomes_project 18 60396588 60396689 - Gm25834 snRNA snRNA MGP_WSBEiJ_T0000976.1 MGP_WSBEiJ_G0000911.1 mouse_genomes_project 18 44361640 44362350 + TEC TEC MGP_WSBEiJ_T0006932.1 MGP_WSBEiJ_G0005702.1 mouse_genomes_project 18 60578563 60586369 + Bvht lincRNA lincRNA MGP_WSBEiJ_T0006933.1 MGP_WSBEiJ_G0005702.1 mouse_genomes_project 18 60578674 60586549 + Bvht lincRNA lincRNA MGP_WSBEiJ_T0048890.1 MGP_WSBEiJ_G0023785.1 mouse_genomes_project 18 65120768 65138577 - MGP_WSBEiJ_P0048890 Cplx4 protein_coding protein_coding MGP_WSBEiJ_T0048843.1 MGP_WSBEiJ_G0023770.1 mouse_genomes_project 18 62688441 62718946 - MGP_WSBEiJ_P0048843 Txnl1 protein_coding protein_coding MGP_WSBEiJ_T0048364.1 MGP_WSBEiJ_G0023571.1 mouse_genomes_project 18 34878266 35081773 + MGP_WSBEiJ_P0048364 protein_coding protein_coding MGP_WSBEiJ_T0048365.1 MGP_WSBEiJ_G0023571.1 mouse_genomes_project 18 34878283 35081504 + MGP_WSBEiJ_P0048365 protein_coding protein_coding MGP_WSBEiJ_T0048366.1 MGP_WSBEiJ_G0023571.1 mouse_genomes_project 18 34878285 35081268 + MGP_WSBEiJ_P0048366 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049212.1 MGP_WSBEiJ_G0023875.1 mouse_genomes_project 18 84104107 84555798 - MGP_WSBEiJ_P0049212 Zfp407 protein_coding protein_coding MGP_WSBEiJ_T0049213.1 MGP_WSBEiJ_G0023875.1 mouse_genomes_project 18 84183664 84588149 - MGP_WSBEiJ_P0049213 Zfp407 protein_coding protein_coding MGP_WSBEiJ_T0049214.1 MGP_WSBEiJ_G0023875.1 mouse_genomes_project 18 84259169 84398779 - Zfp407 protein_coding processed_transcript MGP_WSBEiJ_T0049215.1 MGP_WSBEiJ_G0023875.1 mouse_genomes_project 18 84416313 84421256 - Zfp407 protein_coding retained_intron MGP_WSBEiJ_T0049216.1 MGP_WSBEiJ_G0023875.1 mouse_genomes_project 18 84487855 84555748 - Zfp407 protein_coding processed_transcript MGP_WSBEiJ_T0049217.1 MGP_WSBEiJ_G0023875.1 mouse_genomes_project 18 84550285 84588370 - Zfp407 protein_coding processed_transcript MGP_WSBEiJ_T0010088.1 MGP_WSBEiJ_G0008245.1 mouse_genomes_project 18 40386128 40386191 + Gm22697 miRNA miRNA MGP_WSBEiJ_T0003751.1 MGP_WSBEiJ_G0003370.1 mouse_genomes_project 18 63212761 63332611 - St8sia3os antisense antisense MGP_WSBEiJ_T0003752.1 MGP_WSBEiJ_G0003370.1 mouse_genomes_project 18 63255134 63332611 - St8sia3os antisense antisense MGP_WSBEiJ_T0003753.1 MGP_WSBEiJ_G0003370.1 mouse_genomes_project 18 63324197 63332602 - St8sia3os antisense antisense MGP_WSBEiJ_T0003754.1 MGP_WSBEiJ_G0003370.1 mouse_genomes_project 18 63330905 63332588 - St8sia3os antisense antisense MGP_WSBEiJ_T0048130.1 MGP_WSBEiJ_G0023479.1 mouse_genomes_project 18 22638186 22943454 + MGP_WSBEiJ_P0048130 AW554918 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048131.1 MGP_WSBEiJ_G0023479.1 mouse_genomes_project 18 22638197 22947045 + MGP_WSBEiJ_P0048131 AW554918 protein_coding protein_coding MGP_WSBEiJ_T0048132.1 MGP_WSBEiJ_G0023479.1 mouse_genomes_project 18 22638201 22661831 + AW554918 protein_coding processed_transcript MGP_WSBEiJ_T0048133.1 MGP_WSBEiJ_G0023479.1 mouse_genomes_project 18 22638207 22760332 + AW554918 protein_coding processed_transcript MGP_WSBEiJ_T0048134.1 MGP_WSBEiJ_G0023479.1 mouse_genomes_project 18 22638207 22947050 + MGP_WSBEiJ_P0048134 AW554918 protein_coding protein_coding MGP_WSBEiJ_T0048135.1 MGP_WSBEiJ_G0023479.1 mouse_genomes_project 18 22638207 22947050 + MGP_WSBEiJ_P0048135 AW554918 protein_coding protein_coding MGP_WSBEiJ_T0048136.1 MGP_WSBEiJ_G0023479.1 mouse_genomes_project 18 22638210 22943625 + MGP_WSBEiJ_P0048136 AW554918 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048137.1 MGP_WSBEiJ_G0023479.1 mouse_genomes_project 18 22700729 22943821 + MGP_WSBEiJ_P0048137 AW554918 protein_coding protein_coding MGP_WSBEiJ_T0010106.1 MGP_WSBEiJ_G0008263.1 mouse_genomes_project 18 68120982 68121084 + Mir6356 miRNA miRNA MGP_WSBEiJ_T0049074.1 MGP_WSBEiJ_G0023838.1 mouse_genomes_project 18 75894454 75971636 + MGP_WSBEiJ_P0049074 Smad2 protein_coding protein_coding MGP_WSBEiJ_T0049075.1 MGP_WSBEiJ_G0023838.1 mouse_genomes_project 18 75894575 75970635 + MGP_WSBEiJ_P0049075 Smad2 protein_coding protein_coding MGP_WSBEiJ_T0049076.1 MGP_WSBEiJ_G0023838.1 mouse_genomes_project 18 75894771 75964355 + MGP_WSBEiJ_P0049076 Smad2 protein_coding protein_coding MGP_WSBEiJ_T0049077.1 MGP_WSBEiJ_G0023838.1 mouse_genomes_project 18 75894845 75965798 + MGP_WSBEiJ_P0049077 Smad2 protein_coding protein_coding MGP_WSBEiJ_T0049078.1 MGP_WSBEiJ_G0023838.1 mouse_genomes_project 18 75921880 75971199 + MGP_WSBEiJ_P0049078 Smad2 protein_coding protein_coding MGP_WSBEiJ_T0049079.1 MGP_WSBEiJ_G0023838.1 mouse_genomes_project 18 75923253 75968547 + MGP_WSBEiJ_P0049079 Smad2 protein_coding protein_coding MGP_WSBEiJ_T0049080.1 MGP_WSBEiJ_G0023838.1 mouse_genomes_project 18 75923253 75965742 + MGP_WSBEiJ_P0049080 Smad2 protein_coding protein_coding MGP_WSBEiJ_T0003740.1 MGP_WSBEiJ_G0003363.1 mouse_genomes_project 18 37340253 37362712 - Gm15337 antisense antisense MGP_WSBEiJ_T0048790.1 MGP_WSBEiJ_G0023751.1 mouse_genomes_project 18 60423512 60469510 - MGP_WSBEiJ_P0048790 Arhgef37 protein_coding protein_coding MGP_WSBEiJ_T0012985.1 MGP_WSBEiJ_G0011115.1 mouse_genomes_project 18 4413078 4413493 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048127.1 MGP_WSBEiJ_G0023477.1 mouse_genomes_project 18 22154154 22601011 + MGP_WSBEiJ_P0048127 Fhod3 protein_coding protein_coding MGP_WSBEiJ_T0048291.1 MGP_WSBEiJ_G0023544.1 mouse_genomes_project 18 33832560 33885535 + MGP_WSBEiJ_P0048291 Psd2 protein_coding protein_coding MGP_WSBEiJ_T0048292.1 MGP_WSBEiJ_G0023544.1 mouse_genomes_project 18 33832795 33885535 + MGP_WSBEiJ_P0048292 Psd2 protein_coding protein_coding MGP_WSBEiJ_T0048293.1 MGP_WSBEiJ_G0023544.1 mouse_genomes_project 18 33832797 33885538 + MGP_WSBEiJ_P0048293 Psd2 protein_coding protein_coding MGP_WSBEiJ_T0048294.1 MGP_WSBEiJ_G0023544.1 mouse_genomes_project 18 33832832 33885403 + MGP_WSBEiJ_P0048294 Psd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048295.1 MGP_WSBEiJ_G0023544.1 mouse_genomes_project 18 33832835 33885497 + MGP_WSBEiJ_P0048295 Psd2 protein_coding protein_coding MGP_WSBEiJ_T0048296.1 MGP_WSBEiJ_G0023544.1 mouse_genomes_project 18 33855912 33876910 + Psd2 protein_coding retained_intron MGP_WSBEiJ_T0097002.1 MGP_WSBEiJ_G0035683.1 mouse_genomes_project 18 22130896 22131011 - n-R5s23 rRNA rRNA MGP_WSBEiJ_T0003746.1 MGP_WSBEiJ_G0003367.1 mouse_genomes_project 18 55464516 55500699 + Gm15345 antisense antisense MGP_WSBEiJ_T0006900.1 MGP_WSBEiJ_G0005678.1 mouse_genomes_project 18 7959318 7961715 - 1010001N08Rik lincRNA lincRNA MGP_WSBEiJ_T0006901.1 MGP_WSBEiJ_G0005678.1 mouse_genomes_project 18 7960162 7962787 - 1010001N08Rik lincRNA lincRNA MGP_WSBEiJ_T0010101.1 MGP_WSBEiJ_G0008258.1 mouse_genomes_project 18 60586901 60586971 - Mir145a miRNA miRNA MGP_WSBEiJ_T0010092.1 MGP_WSBEiJ_G0008249.1 mouse_genomes_project 18 56410247 56410343 + Gm44491 miRNA miRNA MGP_WSBEiJ_T0017060.1 MGP_WSBEiJ_G0014791.1 mouse_genomes_project 18 77511236 77514368 - F830208F22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017061.1 MGP_WSBEiJ_G0014791.1 mouse_genomes_project 18 77511236 77514721 - F830208F22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0048044.1 MGP_WSBEiJ_G0023440.1 mouse_genomes_project 18 11852271 11903733 + MGP_WSBEiJ_P0048044 Psma8 protein_coding protein_coding MGP_WSBEiJ_T0048371.1 MGP_WSBEiJ_G0023576.1 mouse_genomes_project 18 34914837 35081773 + MGP_WSBEiJ_P0048371 Pcdha11 protein_coding protein_coding MGP_WSBEiJ_T0047957.1 MGP_WSBEiJ_G0023413.1 mouse_genomes_project 18 6560467 6745275 + MGP_WSBEiJ_P0047957 Colec12 protein_coding protein_coding MGP_WSBEiJ_T0049144.1 MGP_WSBEiJ_G0023861.1 mouse_genomes_project 18 79978835 79996712 + MGP_WSBEiJ_P0049144 Txnl4a protein_coding protein_coding MGP_WSBEiJ_T0049148.1 MGP_WSBEiJ_G0023861.1 mouse_genomes_project 18 79978903 79995386 + MGP_WSBEiJ_P0049148 Txnl4a protein_coding protein_coding MGP_WSBEiJ_T0049150.1 MGP_WSBEiJ_G0023861.1 mouse_genomes_project 18 79978934 79990920 + Txnl4a protein_coding retained_intron MGP_WSBEiJ_T0049155.1 MGP_WSBEiJ_G0023861.1 mouse_genomes_project 18 79987408 79995522 + Txnl4a protein_coding processed_transcript MGP_WSBEiJ_T0010075.1 MGP_WSBEiJ_G0008232.1 mouse_genomes_project 18 7683745 7683817 - Mir1a-2 miRNA miRNA MGP_WSBEiJ_T0099264.1 MGP_WSBEiJ_G0037927.1 mouse_genomes_project 18 13037360 13037489 + Gm24228 snoRNA snoRNA MGP_WSBEiJ_T0048610.1 MGP_WSBEiJ_G0023683.1 mouse_genomes_project 18 44931282 44940421 - MGP_WSBEiJ_P0048610 Atg12 protein_coding protein_coding MGP_WSBEiJ_T0047902.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2880892 2981379 - MGP_WSBEiJ_P0047902 Arhgap12 protein_coding protein_coding MGP_WSBEiJ_T0047903.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2881250 3005284 - MGP_WSBEiJ_P0047903 Arhgap12 protein_coding protein_coding MGP_WSBEiJ_T0047904.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2881662 3005337 - MGP_WSBEiJ_P0047904 Arhgap12 protein_coding protein_coding MGP_WSBEiJ_T0047905.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2881682 3005475 - MGP_WSBEiJ_P0047905 Arhgap12 protein_coding protein_coding MGP_WSBEiJ_T0047906.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2882897 3005269 - MGP_WSBEiJ_P0047906 Arhgap12 protein_coding protein_coding MGP_WSBEiJ_T0047907.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2883021 3005265 - MGP_WSBEiJ_P0047907 Arhgap12 protein_coding protein_coding MGP_WSBEiJ_T0047908.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2889311 2890807 - Arhgap12 protein_coding retained_intron MGP_WSBEiJ_T0047909.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2895506 2928182 - Arhgap12 protein_coding processed_transcript MGP_WSBEiJ_T0047910.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2907383 2980996 - MGP_WSBEiJ_P0047910 Arhgap12 protein_coding protein_coding MGP_WSBEiJ_T0047911.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2915654 3005347 - Arhgap12 protein_coding processed_transcript MGP_WSBEiJ_T0047912.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2919942 2928031 - Arhgap12 protein_coding processed_transcript MGP_WSBEiJ_T0047913.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2920046 3005332 - MGP_WSBEiJ_P0047913 Arhgap12 protein_coding protein_coding MGP_WSBEiJ_T0047914.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2922454 3005318 - Arhgap12 protein_coding processed_transcript MGP_WSBEiJ_T0047915.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2923825 3005312 - Arhgap12 protein_coding processed_transcript MGP_WSBEiJ_T0047916.1 MGP_WSBEiJ_G0023400.1 mouse_genomes_project 18 2926744 2929188 - Arhgap12 protein_coding retained_intron MGP_WSBEiJ_T0048653.1 MGP_WSBEiJ_G0023695.1 mouse_genomes_project 18 49492834 49703523 + MGP_WSBEiJ_P0048653 Prr16 protein_coding protein_coding MGP_WSBEiJ_T0048164.1 MGP_WSBEiJ_G0023495.1 mouse_genomes_project 18 29763996 29802115 + MGP_WSBEiJ_P0048164 Iws1 protein_coding protein_coding MGP_WSBEiJ_T0048526.1 MGP_WSBEiJ_G0023640.1 mouse_genomes_project 18 37762071 37764657 + MGP_WSBEiJ_P0048526 Pabpc2 protein_coding protein_coding MGP_WSBEiJ_T0048075.1 MGP_WSBEiJ_G0023458.1 mouse_genomes_project 18 18509041 18678709 - MGP_WSBEiJ_P0048075 Garem protein_coding protein_coding MGP_WSBEiJ_T0049110.1 MGP_WSBEiJ_G0023845.1 mouse_genomes_project 18 76844262 76922161 + MGP_WSBEiJ_P0049110 St8sia5 protein_coding protein_coding MGP_WSBEiJ_T0049111.1 MGP_WSBEiJ_G0023845.1 mouse_genomes_project 18 76844388 76922031 + MGP_WSBEiJ_P0049111 St8sia5 protein_coding protein_coding MGP_WSBEiJ_T0099277.1 MGP_WSBEiJ_G0037940.1 mouse_genomes_project 18 33383333 33383529 + Snora74a snoRNA snoRNA MGP_WSBEiJ_T0048701.1 MGP_WSBEiJ_G0023716.1 mouse_genomes_project 18 55657412 55680120 - MGP_WSBEiJ_P0048701 C330018D20Rik protein_coding protein_coding MGP_WSBEiJ_T0048702.1 MGP_WSBEiJ_G0023716.1 mouse_genomes_project 18 55659193 55680106 - MGP_WSBEiJ_P0048702 C330018D20Rik protein_coding protein_coding MGP_WSBEiJ_T0048703.1 MGP_WSBEiJ_G0023716.1 mouse_genomes_project 18 55673271 55679998 - C330018D20Rik protein_coding processed_transcript MGP_WSBEiJ_T0010108.1 MGP_WSBEiJ_G0008265.1 mouse_genomes_project 18 69979482 69979586 + Mir6357 miRNA miRNA MGP_WSBEiJ_T0048389.1 MGP_WSBEiJ_G0023588.1 mouse_genomes_project 18 35254991 35256476 + MGP_WSBEiJ_P0048389 Pcdhb8 protein_coding protein_coding MGP_WSBEiJ_T0048390.1 MGP_WSBEiJ_G0023588.1 mouse_genomes_project 18 35255141 35258471 + MGP_WSBEiJ_P0048390 Pcdhb8 protein_coding protein_coding MGP_WSBEiJ_T0010104.1 MGP_WSBEiJ_G0008261.1 mouse_genomes_project 18 65399780 65399850 - Mir694 miRNA miRNA MGP_WSBEiJ_T0048431.1 MGP_WSBEiJ_G0023620.1 mouse_genomes_project 18 35640953 35737854 + MGP_WSBEiJ_P0048431 Pcdhga11 protein_coding protein_coding MGP_WSBEiJ_T0000981.1 MGP_WSBEiJ_G0000916.1 mouse_genomes_project 18 64744220 64745480 + TEC TEC MGP_WSBEiJ_T0048424.1 MGP_WSBEiJ_G0023615.1 mouse_genomes_project 18 35613056 35737854 + MGP_WSBEiJ_P0048424 Pcdhgb5 protein_coding protein_coding MGP_WSBEiJ_T0048425.1 MGP_WSBEiJ_G0023615.1 mouse_genomes_project 18 35613101 35618815 + Pcdhgb5 protein_coding retained_intron MGP_WSBEiJ_T0049178.1 MGP_WSBEiJ_G0023867.1 mouse_genomes_project 18 80519086 80731649 - MGP_WSBEiJ_P0049178 Atp9b protein_coding protein_coding MGP_WSBEiJ_T0049179.1 MGP_WSBEiJ_G0023867.1 mouse_genomes_project 18 80520960 80731530 - MGP_WSBEiJ_P0049179 Atp9b protein_coding unknown_likely_coding MGP_WSBEiJ_T0049180.1 MGP_WSBEiJ_G0023867.1 mouse_genomes_project 18 80520960 80676786 - MGP_WSBEiJ_P0049180 Atp9b protein_coding unknown_likely_coding MGP_WSBEiJ_T0049181.1 MGP_WSBEiJ_G0023867.1 mouse_genomes_project 18 80676885 80731530 - MGP_WSBEiJ_P0049181 Atp9b protein_coding unknown_likely_coding MGP_WSBEiJ_T0049134.1 MGP_WSBEiJ_G0023854.1 mouse_genomes_project 18 77797987 77821322 - MGP_WSBEiJ_P0049134 Slc14a1 protein_coding protein_coding MGP_WSBEiJ_T0049135.1 MGP_WSBEiJ_G0023854.1 mouse_genomes_project 18 77799545 77842579 - MGP_WSBEiJ_P0049135 Slc14a1 protein_coding protein_coding MGP_WSBEiJ_T0049136.1 MGP_WSBEiJ_G0023854.1 mouse_genomes_project 18 77799545 77821227 - MGP_WSBEiJ_P0049136 Slc14a1 protein_coding protein_coding MGP_WSBEiJ_T0048696.1 MGP_WSBEiJ_G0023714.1 mouse_genomes_project 18 55400396 55448257 + MGP_WSBEiJ_P0048696 Lmnb1 protein_coding protein_coding MGP_WSBEiJ_T0048697.1 MGP_WSBEiJ_G0023714.1 mouse_genomes_project 18 55421481 55426489 + Lmnb1 protein_coding retained_intron MGP_WSBEiJ_T0011243.1 MGP_WSBEiJ_G0009400.1 mouse_genomes_project 18 682691 683014 + Gm24632 misc_RNA misc_RNA MGP_WSBEiJ_T0099295.1 MGP_WSBEiJ_G0037958.1 mouse_genomes_project 18 90595580 90595709 + Gm25418 snoRNA snoRNA MGP_WSBEiJ_T0099292.1 MGP_WSBEiJ_G0037955.1 mouse_genomes_project 18 79297055 79297176 - Gm25824 snoRNA snoRNA MGP_WSBEiJ_T0006931.1 MGP_WSBEiJ_G0005701.1 mouse_genomes_project 18 56959409 56971529 + Gm26507 lincRNA lincRNA MGP_WSBEiJ_T0048339.1 MGP_WSBEiJ_G0023559.1 mouse_genomes_project 18 34663847 34676838 + MGP_WSBEiJ_P0048339 Ik protein_coding protein_coding MGP_WSBEiJ_T0048340.1 MGP_WSBEiJ_G0023559.1 mouse_genomes_project 18 34663884 34676841 + MGP_WSBEiJ_P0048340 Ik protein_coding unknown_likely_coding MGP_WSBEiJ_T0048410.1 MGP_WSBEiJ_G0023606.1 mouse_genomes_project 18 35550721 35737854 + MGP_WSBEiJ_P0048410 Pcdhga3 protein_coding protein_coding MGP_WSBEiJ_T0013018.1 MGP_WSBEiJ_G0011148.1 mouse_genomes_project 18 54605803 54606809 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048659.1 MGP_WSBEiJ_G0023700.1 mouse_genomes_project 18 51101050 51118385 + MGP_WSBEiJ_P0048659 1700034E13Rik protein_coding protein_coding MGP_WSBEiJ_T0048660.1 MGP_WSBEiJ_G0023700.1 mouse_genomes_project 18 51101057 51118385 + MGP_WSBEiJ_P0048660 1700034E13Rik protein_coding protein_coding MGP_WSBEiJ_T0006936.1 MGP_WSBEiJ_G0005704.1 mouse_genomes_project 18 61739863 61745101 - 2700046A07Rik lincRNA lincRNA MGP_WSBEiJ_T0006937.1 MGP_WSBEiJ_G0005704.1 mouse_genomes_project 18 61743576 61745133 - 2700046A07Rik lincRNA lincRNA MGP_WSBEiJ_T0048238.1 MGP_WSBEiJ_G0023524.1 mouse_genomes_project 18 32646458 32652959 + MGP_WSBEiJ_P0048238 Egr1 protein_coding protein_coding MGP_WSBEiJ_T0048239.1 MGP_WSBEiJ_G0023524.1 mouse_genomes_project 18 32647839 32652931 + MGP_WSBEiJ_P0048239 Egr1 protein_coding protein_coding MGP_WSBEiJ_T0048308.1 MGP_WSBEiJ_G0023549.1 mouse_genomes_project 18 34407037 34417905 - MGP_WSBEiJ_P0048308 Hbegf protein_coding protein_coding MGP_WSBEiJ_T0048055.1 MGP_WSBEiJ_G0023446.1 mouse_genomes_project 18 17208182 17250620 - MGP_WSBEiJ_P0048055 Dsc3 protein_coding protein_coding MGP_WSBEiJ_T0048056.1 MGP_WSBEiJ_G0023446.1 mouse_genomes_project 18 17210918 17250817 - MGP_WSBEiJ_P0048056 Dsc3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049207.1 MGP_WSBEiJ_G0023872.1 mouse_genomes_project 18 82834048 82932795 + MGP_WSBEiJ_P0049207 Zfp516 protein_coding protein_coding MGP_WSBEiJ_T0049208.1 MGP_WSBEiJ_G0023872.1 mouse_genomes_project 18 82838811 82932795 + MGP_WSBEiJ_P0049208 Zfp516 protein_coding protein_coding MGP_WSBEiJ_T0049236.1 MGP_WSBEiJ_G0023883.1 mouse_genomes_project 18 86727801 86734972 + MGP_WSBEiJ_P0049236 Cbln2 protein_coding protein_coding MGP_WSBEiJ_T0049237.1 MGP_WSBEiJ_G0023883.1 mouse_genomes_project 18 86728211 86734281 + MGP_WSBEiJ_P0049237 Cbln2 protein_coding protein_coding MGP_WSBEiJ_T0049238.1 MGP_WSBEiJ_G0023883.1 mouse_genomes_project 18 86728756 86734970 + MGP_WSBEiJ_P0049238 Cbln2 protein_coding protein_coding MGP_WSBEiJ_T0049239.1 MGP_WSBEiJ_G0023883.1 mouse_genomes_project 18 86729739 86734972 + MGP_WSBEiJ_P0049239 Cbln2 protein_coding protein_coding MGP_WSBEiJ_T0013025.1 MGP_WSBEiJ_G0011155.1 mouse_genomes_project 18 89678084 89678409 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099267.1 MGP_WSBEiJ_G0037930.1 mouse_genomes_project 18 24014529 24014660 + Gm23674 snoRNA snoRNA MGP_WSBEiJ_T0048481.1 MGP_WSBEiJ_G0023631.1 mouse_genomes_project 18 36160444 36172789 + MGP_WSBEiJ_P0048481 0610009O20Rik protein_coding protein_coding MGP_WSBEiJ_T0048411.1 MGP_WSBEiJ_G0023607.1 mouse_genomes_project 18 35556649 35737851 + MGP_WSBEiJ_P0048411 Pcdhgb1 protein_coding protein_coding MGP_WSBEiJ_T0048412.1 MGP_WSBEiJ_G0023607.1 mouse_genomes_project 18 35556673 35564413 + Pcdhgb1 protein_coding processed_transcript MGP_WSBEiJ_T0048815.1 MGP_WSBEiJ_G0023762.1 mouse_genomes_project 18 61483546 61528396 - MGP_WSBEiJ_P0048815 Fbxo38 protein_coding protein_coding MGP_WSBEiJ_T0099293.1 MGP_WSBEiJ_G0037956.1 mouse_genomes_project 18 81851284 81851412 + Gm26012 snoRNA snoRNA MGP_WSBEiJ_T0048541.1 MGP_WSBEiJ_G0023651.1 mouse_genomes_project 18 40481788 40484492 + MGP_WSBEiJ_P0048541 Pou4f3 protein_coding protein_coding MGP_WSBEiJ_T0048205.1 MGP_WSBEiJ_G0023512.1 mouse_genomes_project 18 32196431 32262540 - MGP_WSBEiJ_P0048205 Fam13b protein_coding protein_coding MGP_WSBEiJ_T0049218.1 MGP_WSBEiJ_G0023876.1 mouse_genomes_project 18 84604254 84648993 - MGP_WSBEiJ_P0049218 Cndp1 protein_coding protein_coding MGP_WSBEiJ_T0049219.1 MGP_WSBEiJ_G0023876.1 mouse_genomes_project 18 84624103 84648955 - Cndp1 protein_coding retained_intron MGP_WSBEiJ_T0049220.1 MGP_WSBEiJ_G0023876.1 mouse_genomes_project 18 84626265 84648855 - Cndp1 protein_coding retained_intron MGP_WSBEiJ_T0049085.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76579672 76622516 + MGP_WSBEiJ_P0049085 Hdhd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049087.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593677 76610481 + MGP_WSBEiJ_P0049087 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0049088.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593677 76623238 + MGP_WSBEiJ_P0049088 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0049089.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593688 76622516 + MGP_WSBEiJ_P0049089 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0049090.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593688 76610481 + MGP_WSBEiJ_P0049090 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0049091.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593713 76605339 + MGP_WSBEiJ_P0049091 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0049092.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593946 76623969 + MGP_WSBEiJ_P0049092 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0049093.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593946 76603499 + MGP_WSBEiJ_P0049093 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0049094.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593979 76623238 + MGP_WSBEiJ_P0049094 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0049095.1 MGP_WSBEiJ_G0023841.1 mouse_genomes_project 18 76593998 76623969 + MGP_WSBEiJ_P0049095 Hdhd2 protein_coding protein_coding MGP_WSBEiJ_T0048708.1 MGP_WSBEiJ_G0023720.1 mouse_genomes_project 18 56257025 56461802 + MGP_WSBEiJ_P0048708 1700011I03Rik protein_coding protein_coding MGP_WSBEiJ_T0048709.1 MGP_WSBEiJ_G0023720.1 mouse_genomes_project 18 56257074 56461802 + MGP_WSBEiJ_P0048709 1700011I03Rik protein_coding protein_coding MGP_WSBEiJ_T0048710.1 MGP_WSBEiJ_G0023720.1 mouse_genomes_project 18 56257127 56289965 + MGP_WSBEiJ_P0048710 1700011I03Rik protein_coding protein_coding MGP_WSBEiJ_T0048711.1 MGP_WSBEiJ_G0023720.1 mouse_genomes_project 18 56286184 56461743 + MGP_WSBEiJ_P0048711 1700011I03Rik protein_coding protein_coding MGP_WSBEiJ_T0006925.1 MGP_WSBEiJ_G0005696.1 mouse_genomes_project 18 47826280 47827432 + 1700044K03Rik lincRNA lincRNA MGP_WSBEiJ_T0100678.1 MGP_WSBEiJ_G0039136.1 mouse_genomes_project 18 34926334 34927120 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0000982.1 MGP_WSBEiJ_G0000917.1 mouse_genomes_project 18 80081157 80082678 - TEC TEC MGP_WSBEiJ_T0048236.1 MGP_WSBEiJ_G0023522.1 mouse_genomes_project 18 32560064 32625345 + MGP_WSBEiJ_P0048236 Kdm3b protein_coding protein_coding MGP_WSBEiJ_T0013022.1 MGP_WSBEiJ_G0011152.1 mouse_genomes_project 18 75876980 75877194 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048923.1 MGP_WSBEiJ_G0023804.1 mouse_genomes_project 18 67621443 67662010 - MGP_WSBEiJ_P0048923 Fam210a protein_coding protein_coding MGP_WSBEiJ_T0048924.1 MGP_WSBEiJ_G0023804.1 mouse_genomes_project 18 67637170 67661879 - MGP_WSBEiJ_P0048924 Fam210a protein_coding protein_coding MGP_WSBEiJ_T0047955.1 MGP_WSBEiJ_G0023411.1 mouse_genomes_project 18 6184343 6323293 - MGP_WSBEiJ_P0047955 Ccny protein_coding protein_coding MGP_WSBEiJ_T0048080.1 MGP_WSBEiJ_G0023461.1 mouse_genomes_project 18 19749023 19939535 + MGP_WSBEiJ_P0048080 Asxl3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048081.1 MGP_WSBEiJ_G0023461.1 mouse_genomes_project 18 19749556 19785301 + Asxl3 protein_coding retained_intron MGP_WSBEiJ_T0048082.1 MGP_WSBEiJ_G0023461.1 mouse_genomes_project 18 19749762 19939742 + MGP_WSBEiJ_P0048082 Asxl3 protein_coding protein_coding MGP_WSBEiJ_T0048083.1 MGP_WSBEiJ_G0023461.1 mouse_genomes_project 18 19749762 19939530 + MGP_WSBEiJ_P0048083 Asxl3 protein_coding protein_coding MGP_WSBEiJ_T0048692.1 MGP_WSBEiJ_G0023713.1 mouse_genomes_project 18 55259177 55265591 + MGP_WSBEiJ_P0048692 Tex43 protein_coding protein_coding MGP_WSBEiJ_T0048693.1 MGP_WSBEiJ_G0023713.1 mouse_genomes_project 18 55259206 55263540 + MGP_WSBEiJ_P0048693 Tex43 protein_coding protein_coding MGP_WSBEiJ_T0048694.1 MGP_WSBEiJ_G0023713.1 mouse_genomes_project 18 55259216 55265521 + MGP_WSBEiJ_P0048694 Tex43 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048695.1 MGP_WSBEiJ_G0023713.1 mouse_genomes_project 18 55259253 55265591 + MGP_WSBEiJ_P0048695 Tex43 protein_coding protein_coding MGP_WSBEiJ_T0048774.1 MGP_WSBEiJ_G0023744.1 mouse_genomes_project 18 59918427 59936494 - MGP_WSBEiJ_P0048774 Cdx1 protein_coding protein_coding MGP_WSBEiJ_T0048715.1 MGP_WSBEiJ_G0023724.1 mouse_genomes_project 18 57419434 57441233 + MGP_WSBEiJ_P0048715 Isoc1 protein_coding protein_coding MGP_WSBEiJ_T0048531.1 MGP_WSBEiJ_G0023645.1 mouse_genomes_project 18 40061596 40074468 - MGP_WSBEiJ_P0048531 Grxcr2 protein_coding protein_coding MGP_WSBEiJ_T0048678.1 MGP_WSBEiJ_G0023709.1 mouse_genomes_project 18 53466400 53573599 - MGP_WSBEiJ_P0048678 Zfp608 protein_coding protein_coding MGP_WSBEiJ_T0047937.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4722384 4782193 + MGP_WSBEiJ_P0047937 Wac protein_coding protein_coding MGP_WSBEiJ_T0047938.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4722397 4726173 + MGP_WSBEiJ_P0047938 Wac protein_coding protein_coding MGP_WSBEiJ_T0047939.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4722402 4782747 + MGP_WSBEiJ_P0047939 Wac protein_coding protein_coding MGP_WSBEiJ_T0047940.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4722618 4777055 + MGP_WSBEiJ_P0047940 Wac protein_coding protein_coding MGP_WSBEiJ_T0047941.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4722748 4726098 + MGP_WSBEiJ_P0047941 Wac protein_coding protein_coding MGP_WSBEiJ_T0047942.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4722749 4784709 + MGP_WSBEiJ_P0047942 Wac protein_coding protein_coding MGP_WSBEiJ_T0047943.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4722793 4726275 + Wac protein_coding retained_intron MGP_WSBEiJ_T0047944.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4723053 4777055 + MGP_WSBEiJ_P0047944 Wac protein_coding protein_coding MGP_WSBEiJ_T0047945.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4724202 4771344 + MGP_WSBEiJ_P0047945 Wac protein_coding protein_coding MGP_WSBEiJ_T0047946.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4724223 4760041 + MGP_WSBEiJ_P0047946 Wac protein_coding protein_coding MGP_WSBEiJ_T0047947.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4724477 4771151 + MGP_WSBEiJ_P0047947 Wac protein_coding protein_coding MGP_WSBEiJ_T0047948.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4726196 4776562 + MGP_WSBEiJ_P0047948 Wac protein_coding protein_coding MGP_WSBEiJ_T0047949.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4760023 4771351 + MGP_WSBEiJ_P0047949 Wac protein_coding protein_coding MGP_WSBEiJ_T0047950.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4765685 4771447 + Wac protein_coding retained_intron MGP_WSBEiJ_T0047951.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4765703 4773569 + MGP_WSBEiJ_P0047951 Wac protein_coding protein_coding MGP_WSBEiJ_T0047952.1 MGP_WSBEiJ_G0023408.1 mouse_genomes_project 18 4772704 4832200 + MGP_WSBEiJ_P0047952 Wac protein_coding protein_coding MGP_WSBEiJ_T0049247.1 MGP_WSBEiJ_G0023885.1 mouse_genomes_project 18 89079792 89259493 + MGP_WSBEiJ_P0049247 Rttn protein_coding protein_coding MGP_WSBEiJ_T0048084.1 MGP_WSBEiJ_G0023462.1 mouse_genomes_project 18 20109350 20451284 - MGP_WSBEiJ_P0048084 Nol4 protein_coding protein_coding MGP_WSBEiJ_T0048085.1 MGP_WSBEiJ_G0023462.1 mouse_genomes_project 18 20109360 20275913 - MGP_WSBEiJ_P0048085 Nol4 protein_coding protein_coding MGP_WSBEiJ_T0048086.1 MGP_WSBEiJ_G0023462.1 mouse_genomes_project 18 20109560 20449875 - MGP_WSBEiJ_P0048086 Nol4 protein_coding protein_coding MGP_WSBEiJ_T0048087.1 MGP_WSBEiJ_G0023462.1 mouse_genomes_project 18 20110477 20275913 - MGP_WSBEiJ_P0048087 Nol4 protein_coding protein_coding MGP_WSBEiJ_T0048088.1 MGP_WSBEiJ_G0023462.1 mouse_genomes_project 18 20110703 20451320 - MGP_WSBEiJ_P0048088 Nol4 protein_coding protein_coding MGP_WSBEiJ_T0048089.1 MGP_WSBEiJ_G0023462.1 mouse_genomes_project 18 20246317 20251122 - Nol4 protein_coding processed_transcript MGP_WSBEiJ_T0048090.1 MGP_WSBEiJ_G0023462.1 mouse_genomes_project 18 20336268 20450158 - MGP_WSBEiJ_P0048090 Nol4 protein_coding protein_coding MGP_WSBEiJ_T0048091.1 MGP_WSBEiJ_G0023462.1 mouse_genomes_project 18 20346823 20376202 - Nol4 protein_coding processed_transcript MGP_WSBEiJ_T0048910.1 MGP_WSBEiJ_G0023795.1 mouse_genomes_project 18 66708596 66758496 - MGP_WSBEiJ_P0048910 Afg3l2 protein_coding protein_coding MGP_WSBEiJ_T0010099.1 MGP_WSBEiJ_G0008256.1 mouse_genomes_project 18 60324963 60325076 + Gm25301 miRNA miRNA MGP_WSBEiJ_T0000975.1 MGP_WSBEiJ_G0000910.1 mouse_genomes_project 18 44269759 44270359 - TEC TEC MGP_WSBEiJ_T0003730.1 MGP_WSBEiJ_G0003353.1 mouse_genomes_project 18 34861727 34863794 - antisense antisense MGP_WSBEiJ_T0047876.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1761635 1969235 + MGP_WSBEiJ_P0047876 Svil protein_coding protein_coding MGP_WSBEiJ_T0047877.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1761662 1906809 + Svil protein_coding retained_intron MGP_WSBEiJ_T0047878.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1761800 1906725 + Svil protein_coding retained_intron MGP_WSBEiJ_T0047879.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1762821 1969243 + MGP_WSBEiJ_P0047879 Svil protein_coding protein_coding MGP_WSBEiJ_T0047880.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1835748 1895296 + MGP_WSBEiJ_P0047880 Svil protein_coding protein_coding MGP_WSBEiJ_T0047881.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1836553 1968556 + MGP_WSBEiJ_P0047881 Svil protein_coding protein_coding MGP_WSBEiJ_T0047882.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1836871 1845948 + Svil protein_coding processed_transcript MGP_WSBEiJ_T0047883.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1888677 1968386 + MGP_WSBEiJ_P0047883 Svil protein_coding protein_coding MGP_WSBEiJ_T0047884.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1888679 1968110 + MGP_WSBEiJ_P0047884 Svil protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047885.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1894993 1969232 + MGP_WSBEiJ_P0047885 Svil protein_coding protein_coding MGP_WSBEiJ_T0047886.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1913593 1969235 + MGP_WSBEiJ_P0047886 Svil protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047887.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1943990 1945126 + Svil protein_coding retained_intron MGP_WSBEiJ_T0047888.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1953292 1966967 + MGP_WSBEiJ_P0047888 Svil protein_coding protein_coding MGP_WSBEiJ_T0047889.1 MGP_WSBEiJ_G0023397.1 mouse_genomes_project 18 1964208 1969162 + Svil protein_coding retained_intron MGP_WSBEiJ_T0047954.1 MGP_WSBEiJ_G0023410.1 mouse_genomes_project 18 6148542 6152742 - MGP_WSBEiJ_P0047954 Gjd4 protein_coding protein_coding MGP_WSBEiJ_T0048912.1 MGP_WSBEiJ_G0023797.1 mouse_genomes_project 18 66797834 66928311 - MGP_WSBEiJ_P0048912 Spire1 protein_coding protein_coding MGP_WSBEiJ_T0047992.1 MGP_WSBEiJ_G0023426.1 mouse_genomes_project 18 9024161 9165720 - MGP_WSBEiJ_P0047992 Tmem241 protein_coding protein_coding MGP_WSBEiJ_T0047993.1 MGP_WSBEiJ_G0023426.1 mouse_genomes_project 18 9110608 9165677 - MGP_WSBEiJ_P0047993 Tmem241 protein_coding protein_coding MGP_WSBEiJ_T0003760.1 MGP_WSBEiJ_G0003374.1 mouse_genomes_project 18 80102998 80106268 + Gm26676 antisense antisense MGP_WSBEiJ_T0100050.1 MGP_WSBEiJ_G0038672.1 mouse_genomes_project 18 74896972 74906482 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100051.1 MGP_WSBEiJ_G0038672.1 mouse_genomes_project 18 74897243 74897501 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100052.1 MGP_WSBEiJ_G0038672.1 mouse_genomes_project 18 74903754 74906494 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0049064.1 MGP_WSBEiJ_G0023833.1 mouse_genomes_project 18 74599955 74604738 + MGP_WSBEiJ_P0049064 BC031181 protein_coding protein_coding MGP_WSBEiJ_T0048287.1 MGP_WSBEiJ_G0023541.1 mouse_genomes_project 18 33585139 33592016 - MGP_WSBEiJ_P0048287 Tmem173 protein_coding protein_coding MGP_WSBEiJ_T0013028.1 MGP_WSBEiJ_G0011158.1 mouse_genomes_project 18 90422705 90423167 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048406.1 MGP_WSBEiJ_G0023603.1 mouse_genomes_project 18 35516399 35520111 - MGP_WSBEiJ_P0048406 Taf7 protein_coding protein_coding MGP_WSBEiJ_T0049061.1 MGP_WSBEiJ_G0023830.1 mouse_genomes_project 18 74351470 74381337 + MGP_WSBEiJ_P0049061 Acaa2 protein_coding protein_coding MGP_WSBEiJ_T0096801.1 MGP_WSBEiJ_G0035482.1 mouse_genomes_project 18 59307472 59308703 + pseudogene pseudogene MGP_WSBEiJ_T0048658.1 MGP_WSBEiJ_G0023699.1 mouse_genomes_project 18 51069390 51094691 + MGP_WSBEiJ_P0048658 Zfp474 protein_coding protein_coding MGP_WSBEiJ_T0006920.1 MGP_WSBEiJ_G0005693.1 mouse_genomes_project 18 35531357 35537648 + 3222401L13Rik lincRNA lincRNA MGP_WSBEiJ_T0006921.1 MGP_WSBEiJ_G0005693.1 mouse_genomes_project 18 35531813 35534643 + 3222401L13Rik lincRNA lincRNA MGP_WSBEiJ_T0048009.1 MGP_WSBEiJ_G0023430.1 mouse_genomes_project 18 9303043 9360763 - MGP_WSBEiJ_P0048009 Ankrd29 protein_coding protein_coding MGP_WSBEiJ_T0048010.1 MGP_WSBEiJ_G0023430.1 mouse_genomes_project 18 9303046 9326199 - Ankrd29 protein_coding processed_transcript MGP_WSBEiJ_T0048011.1 MGP_WSBEiJ_G0023430.1 mouse_genomes_project 18 9305258 9360690 - MGP_WSBEiJ_P0048011 Ankrd29 protein_coding protein_coding MGP_WSBEiJ_T0048012.1 MGP_WSBEiJ_G0023430.1 mouse_genomes_project 18 9330259 9360772 - MGP_WSBEiJ_P0048012 Ankrd29 protein_coding protein_coding MGP_WSBEiJ_T0048998.1 MGP_WSBEiJ_G0023811.1 mouse_genomes_project 18 69439221 69599708 - MGP_WSBEiJ_P0048998 Rab27b protein_coding protein_coding MGP_WSBEiJ_T0048999.1 MGP_WSBEiJ_G0023811.1 mouse_genomes_project 18 69443728 69509802 - MGP_WSBEiJ_P0048999 Rab27b protein_coding protein_coding MGP_WSBEiJ_T0049000.1 MGP_WSBEiJ_G0023811.1 mouse_genomes_project 18 69443728 69509802 - MGP_WSBEiJ_P0049000 Rab27b protein_coding protein_coding MGP_WSBEiJ_T0049001.1 MGP_WSBEiJ_G0023811.1 mouse_genomes_project 18 69596266 69599677 - Rab27b protein_coding retained_intron MGP_WSBEiJ_T0098048.1 MGP_WSBEiJ_G0036711.1 mouse_genomes_project 18 63881092 63881192 - Gm24504 snRNA snRNA MGP_WSBEiJ_T0048161.1 MGP_WSBEiJ_G0023493.1 mouse_genomes_project 18 29642067 29648690 - MGP_WSBEiJ_P0048161 Gpr17 protein_coding protein_coding MGP_WSBEiJ_T0003758.1 MGP_WSBEiJ_G0003373.1 mouse_genomes_project 18 74100490 74108982 - 1700120E14Rik antisense antisense MGP_WSBEiJ_T0003759.1 MGP_WSBEiJ_G0003373.1 mouse_genomes_project 18 74100603 74108982 - 1700120E14Rik antisense antisense MGP_WSBEiJ_T0011260.1 MGP_WSBEiJ_G0009417.1 mouse_genomes_project 18 54221732 54222017 - Gm24514 misc_RNA misc_RNA MGP_WSBEiJ_T0010073.1 MGP_WSBEiJ_G0008230.1 mouse_genomes_project 18 7681173 7681241 - Mir133a-1 miRNA miRNA MGP_WSBEiJ_T0012991.1 MGP_WSBEiJ_G0011121.1 mouse_genomes_project 18 12162759 12163145 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010096.1 MGP_WSBEiJ_G0008253.1 mouse_genomes_project 18 59849531 59849591 + Mir7220 miRNA miRNA MGP_WSBEiJ_T0047860.1 MGP_WSBEiJ_G0023391.1 mouse_genomes_project 18 206550 259263 + MGP_WSBEiJ_P0047860 Cul2 protein_coding protein_coding MGP_WSBEiJ_T0047861.1 MGP_WSBEiJ_G0023391.1 mouse_genomes_project 18 206787 258274 + MGP_WSBEiJ_P0047861 Cul2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047862.1 MGP_WSBEiJ_G0023391.1 mouse_genomes_project 18 206794 259266 + MGP_WSBEiJ_P0047862 Cul2 protein_coding protein_coding MGP_WSBEiJ_T0047863.1 MGP_WSBEiJ_G0023391.1 mouse_genomes_project 18 206819 254420 + MGP_WSBEiJ_P0047863 Cul2 protein_coding protein_coding MGP_WSBEiJ_T0047864.1 MGP_WSBEiJ_G0023391.1 mouse_genomes_project 18 247340 250139 + Cul2 protein_coding processed_transcript MGP_WSBEiJ_T0047865.1 MGP_WSBEiJ_G0023391.1 mouse_genomes_project 18 256772 257902 + Cul2 protein_coding processed_transcript MGP_WSBEiJ_T0048752.1 MGP_WSBEiJ_G0023738.1 mouse_genomes_project 18 59656760 59660797 + MGP_WSBEiJ_P0048752 Rps14 protein_coding protein_coding MGP_WSBEiJ_T0048753.1 MGP_WSBEiJ_G0023738.1 mouse_genomes_project 18 59656916 59659670 + Rps14 protein_coding retained_intron MGP_WSBEiJ_T0048754.1 MGP_WSBEiJ_G0023738.1 mouse_genomes_project 18 59656931 59660792 + MGP_WSBEiJ_P0048754 Rps14 protein_coding protein_coding MGP_WSBEiJ_T0048755.1 MGP_WSBEiJ_G0023738.1 mouse_genomes_project 18 59657479 59660110 + MGP_WSBEiJ_P0048755 Rps14 protein_coding protein_coding MGP_WSBEiJ_T0048756.1 MGP_WSBEiJ_G0023738.1 mouse_genomes_project 18 59657966 59660708 + MGP_WSBEiJ_P0048756 Rps14 protein_coding protein_coding MGP_WSBEiJ_T0048757.1 MGP_WSBEiJ_G0023738.1 mouse_genomes_project 18 59658489 59660796 + MGP_WSBEiJ_P0048757 Rps14 protein_coding protein_coding MGP_WSBEiJ_T0049109.1 MGP_WSBEiJ_G0023844.1 mouse_genomes_project 18 76843415 76844667 - MGP_WSBEiJ_P0049109 Gm7276 protein_coding protein_coding MGP_WSBEiJ_T0048170.1 MGP_WSBEiJ_G0023499.1 mouse_genomes_project 18 30094049 30153734 + MGP_WSBEiJ_P0048170 Bin1 protein_coding protein_coding MGP_WSBEiJ_T0048171.1 MGP_WSBEiJ_G0023499.1 mouse_genomes_project 18 30094049 30153734 + MGP_WSBEiJ_P0048171 Bin1 protein_coding protein_coding MGP_WSBEiJ_T0012999.1 MGP_WSBEiJ_G0011129.1 mouse_genomes_project 18 29731851 29732009 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048179.1 MGP_WSBEiJ_G0023504.1 mouse_genomes_project 18 30904589 30920157 - MGP_WSBEiJ_P0048179 Stard4 protein_coding protein_coding MGP_WSBEiJ_T0048180.1 MGP_WSBEiJ_G0023504.1 mouse_genomes_project 18 30908858 30920252 - MGP_WSBEiJ_P0048180 Stard4 protein_coding protein_coding MGP_WSBEiJ_T0048181.1 MGP_WSBEiJ_G0023504.1 mouse_genomes_project 18 30910124 30920307 - Stard4 protein_coding retained_intron MGP_WSBEiJ_T0099291.1 MGP_WSBEiJ_G0037954.1 mouse_genomes_project 18 77390941 77391073 + Gm26014 snoRNA snoRNA MGP_WSBEiJ_T0048386.1 MGP_WSBEiJ_G0023586.1 mouse_genomes_project 18 35229839 35233289 + MGP_WSBEiJ_P0048386 Pcdhb6 protein_coding protein_coding MGP_WSBEiJ_T0048387.1 MGP_WSBEiJ_G0023586.1 mouse_genomes_project 18 35229864 35234701 + MGP_WSBEiJ_P0048387 Pcdhb6 protein_coding protein_coding MGP_WSBEiJ_T0010109.1 MGP_WSBEiJ_G0008266.1 mouse_genomes_project 18 74495313 74495395 - Gm25594 miRNA miRNA MGP_WSBEiJ_T0048886.1 MGP_WSBEiJ_G0023783.1 mouse_genomes_project 18 65020212 65036595 + MGP_WSBEiJ_P0048886 Grp protein_coding protein_coding MGP_WSBEiJ_T0048887.1 MGP_WSBEiJ_G0023783.1 mouse_genomes_project 18 65020880 65028836 + MGP_WSBEiJ_P0048887 Grp protein_coding protein_coding MGP_WSBEiJ_T0048888.1 MGP_WSBEiJ_G0023783.1 mouse_genomes_project 18 65020890 65036594 + MGP_WSBEiJ_P0048888 Grp protein_coding protein_coding MGP_WSBEiJ_T0000978.1 MGP_WSBEiJ_G0000913.1 mouse_genomes_project 18 53935313 53935745 + TEC TEC MGP_WSBEiJ_T0049062.1 MGP_WSBEiJ_G0023831.1 mouse_genomes_project 18 74528788 74552941 - MGP_WSBEiJ_P0049062 Lipg protein_coding protein_coding MGP_WSBEiJ_T0006911.1 MGP_WSBEiJ_G0005686.1 mouse_genomes_project 18 30071948 30095117 - A830052D11Rik lincRNA lincRNA MGP_WSBEiJ_T0047979.1 MGP_WSBEiJ_G0023420.1 mouse_genomes_project 18 7511465 7521868 + MGP_WSBEiJ_P0047979 Snrpd1 protein_coding protein_coding MGP_WSBEiJ_T0048120.1 MGP_WSBEiJ_G0023473.1 mouse_genomes_project 18 22019828 22043692 - MGP_WSBEiJ_P0048120 Slc39a6 protein_coding protein_coding MGP_WSBEiJ_T0048121.1 MGP_WSBEiJ_G0023473.1 mouse_genomes_project 18 22022222 22043390 - MGP_WSBEiJ_P0048121 Slc39a6 protein_coding protein_coding MGP_WSBEiJ_T0048122.1 MGP_WSBEiJ_G0023473.1 mouse_genomes_project 18 22036198 22039303 - Slc39a6 protein_coding retained_intron MGP_WSBEiJ_T0048123.1 MGP_WSBEiJ_G0023473.1 mouse_genomes_project 18 22041367 22043168 - MGP_WSBEiJ_P0048123 Slc39a6 protein_coding protein_coding MGP_WSBEiJ_T0048669.1 MGP_WSBEiJ_G0023703.1 mouse_genomes_project 18 51670804 51715988 + MGP_WSBEiJ_P0048669 Snx2 protein_coding protein_coding MGP_WSBEiJ_T0100048.1 MGP_WSBEiJ_G0038671.1 mouse_genomes_project 18 36244741 36251881 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100049.1 MGP_WSBEiJ_G0038671.1 mouse_genomes_project 18 36245072 36254736 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0099265.1 MGP_WSBEiJ_G0037928.1 mouse_genomes_project 18 14215773 14215903 + Gm22470 snoRNA snoRNA MGP_WSBEiJ_T0099283.1 MGP_WSBEiJ_G0037946.1 mouse_genomes_project 18 57372737 57372868 - Gm23270 snoRNA snoRNA MGP_WSBEiJ_T0048297.1 MGP_WSBEiJ_G0023545.1 mouse_genomes_project 18 33888527 34083024 - MGP_WSBEiJ_P0048297 Nrg2 protein_coding protein_coding MGP_WSBEiJ_T0048298.1 MGP_WSBEiJ_G0023545.1 mouse_genomes_project 18 33888527 34083024 - MGP_WSBEiJ_P0048298 Nrg2 protein_coding protein_coding MGP_WSBEiJ_T0048299.1 MGP_WSBEiJ_G0023545.1 mouse_genomes_project 18 33888734 33925251 - MGP_WSBEiJ_P0048299 Nrg2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048300.1 MGP_WSBEiJ_G0023545.1 mouse_genomes_project 18 33898217 34082876 - MGP_WSBEiJ_P0048300 Nrg2 protein_coding protein_coding MGP_WSBEiJ_T0006942.1 MGP_WSBEiJ_G0005709.1 mouse_genomes_project 18 75139638 75147797 + Gm10532 lincRNA lincRNA MGP_WSBEiJ_T0048544.1 MGP_WSBEiJ_G0023653.1 mouse_genomes_project 18 40680574 40682207 - MGP_WSBEiJ_P0048544 Gpr151 protein_coding protein_coding MGP_WSBEiJ_T0006929.1 MGP_WSBEiJ_G0005700.1 mouse_genomes_project 18 53573702 53671197 + Gm4221 lincRNA lincRNA MGP_WSBEiJ_T0006930.1 MGP_WSBEiJ_G0005700.1 mouse_genomes_project 18 53647215 53673274 + Gm4221 lincRNA lincRNA MGP_WSBEiJ_T0048655.1 MGP_WSBEiJ_G0023697.1 mouse_genomes_project 18 50901016 50932571 + MGP_WSBEiJ_P0048655 Srfbp1 protein_coding protein_coding MGP_WSBEiJ_T0049003.1 MGP_WSBEiJ_G0023813.1 mouse_genomes_project 18 69925554 69946016 - MGP_WSBEiJ_P0049003 4930503L19Rik protein_coding protein_coding MGP_WSBEiJ_T0098032.1 MGP_WSBEiJ_G0036695.1 mouse_genomes_project 18 36212889 36212992 + Gm23205 snRNA snRNA MGP_WSBEiJ_T0048714.1 MGP_WSBEiJ_G0023723.1 mouse_genomes_project 18 57308995 57370383 + MGP_WSBEiJ_P0048714 Slc27a6 protein_coding protein_coding MGP_WSBEiJ_T0048609.1 MGP_WSBEiJ_G0023682.1 mouse_genomes_project 18 44908662 44927202 - MGP_WSBEiJ_P0048609 Cdo1 protein_coding protein_coding MGP_WSBEiJ_T0017038.1 MGP_WSBEiJ_G0014784.1 mouse_genomes_project 18 48061590 48062990 + Gm16283 processed_transcript processed_transcript MGP_WSBEiJ_T0049063.1 MGP_WSBEiJ_G0023832.1 mouse_genomes_project 18 74594531 74597435 + MGP_WSBEiJ_P0049063 Rpl17 protein_coding protein_coding MGP_WSBEiJ_T0098054.1 MGP_WSBEiJ_G0036717.1 mouse_genomes_project 18 82244211 82244341 - Gm25060 snRNA snRNA MGP_WSBEiJ_T0003720.1 MGP_WSBEiJ_G0003346.1 mouse_genomes_project 18 9245387 9250314 + Gm15956 antisense antisense MGP_WSBEiJ_T0048276.1 MGP_WSBEiJ_G0023537.1 mouse_genomes_project 18 33491605 33496843 - MGP_WSBEiJ_P0048276 Spata24 protein_coding protein_coding MGP_WSBEiJ_T0048277.1 MGP_WSBEiJ_G0023537.1 mouse_genomes_project 18 33494673 33496843 - MGP_WSBEiJ_P0048277 Spata24 protein_coding protein_coding MGP_WSBEiJ_T0047934.1 MGP_WSBEiJ_G0023406.1 mouse_genomes_project 18 3917664 4127577 - MGP_WSBEiJ_P0047934 Armc4 protein_coding protein_coding MGP_WSBEiJ_T0047935.1 MGP_WSBEiJ_G0023406.1 mouse_genomes_project 18 3959437 4127619 - MGP_WSBEiJ_P0047935 Armc4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049143.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79978805 79983533 + Gm16286 protein_coding processed_transcript MGP_WSBEiJ_T0049145.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79978838 79984765 + MGP_WSBEiJ_P0049145 Gm16286 protein_coding protein_coding MGP_WSBEiJ_T0049146.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79978870 79982807 + Gm16286 protein_coding retained_intron MGP_WSBEiJ_T0049147.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79978886 79979819 + Gm16286 protein_coding retained_intron MGP_WSBEiJ_T0049149.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79978907 79984756 + MGP_WSBEiJ_P0049149 Gm16286 protein_coding protein_coding MGP_WSBEiJ_T0049151.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79978935 79984774 + MGP_WSBEiJ_P0049151 Gm16286 protein_coding protein_coding MGP_WSBEiJ_T0049152.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79978953 79979727 + Gm16286 protein_coding retained_intron MGP_WSBEiJ_T0049153.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79978958 79979819 + Gm16286 protein_coding retained_intron MGP_WSBEiJ_T0049154.1 MGP_WSBEiJ_G0023860.1 mouse_genomes_project 18 79979300 79983527 + Gm16286 protein_coding processed_transcript MGP_WSBEiJ_T0099286.1 MGP_WSBEiJ_G0037949.1 mouse_genomes_project 18 66772355 66772489 + Gm24900 snoRNA snoRNA MGP_WSBEiJ_T0048781.1 MGP_WSBEiJ_G0023748.1 mouse_genomes_project 18 60098784 60120991 - MGP_WSBEiJ_P0048781 Slc26a2 protein_coding protein_coding MGP_WSBEiJ_T0048782.1 MGP_WSBEiJ_G0023748.1 mouse_genomes_project 18 60104981 60108118 - MGP_WSBEiJ_P0048782 Slc26a2 protein_coding protein_coding MGP_WSBEiJ_T0048783.1 MGP_WSBEiJ_G0023748.1 mouse_genomes_project 18 60109453 60120759 - MGP_WSBEiJ_P0048783 Slc26a2 protein_coding protein_coding MGP_WSBEiJ_T0048784.1 MGP_WSBEiJ_G0023748.1 mouse_genomes_project 18 60114938 60120736 - Slc26a2 protein_coding retained_intron MGP_WSBEiJ_T0048125.1 MGP_WSBEiJ_G0023475.1 mouse_genomes_project 18 22097348 22146232 + MGP_WSBEiJ_P0048125 Mocos protein_coding protein_coding MGP_WSBEiJ_T0048536.1 MGP_WSBEiJ_G0023647.1 mouse_genomes_project 18 40250789 40251083 + MGP_WSBEiJ_P0048536 Gm5689 protein_coding protein_coding MGP_WSBEiJ_T0049183.1 MGP_WSBEiJ_G0023869.1 mouse_genomes_project 18 82291092 82305407 - MGP_WSBEiJ_P0049183 Galr1 protein_coding protein_coding MGP_WSBEiJ_T0048712.1 MGP_WSBEiJ_G0023721.1 mouse_genomes_project 18 56613233 56682437 + MGP_WSBEiJ_P0048712 Slc12a2 protein_coding protein_coding MGP_WSBEiJ_T0049232.1 MGP_WSBEiJ_G0023880.1 mouse_genomes_project 18 84954232 85003828 + MGP_WSBEiJ_P0049232 Fbxo15 protein_coding protein_coding MGP_WSBEiJ_T0049234.1 MGP_WSBEiJ_G0023880.1 mouse_genomes_project 18 84973866 85003828 + MGP_WSBEiJ_P0049234 Fbxo15 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048362.1 MGP_WSBEiJ_G0023569.1 mouse_genomes_project 18 34863491 35736181 + MGP_WSBEiJ_P0048362 Gm42416 protein_coding protein_coding MGP_WSBEiJ_T0010098.1 MGP_WSBEiJ_G0008255.1 mouse_genomes_project 18 60019877 60019941 + Mir6983 miRNA miRNA MGP_WSBEiJ_T0099288.1 MGP_WSBEiJ_G0037951.1 mouse_genomes_project 18 74595108 74595174 + Snord58b snoRNA snoRNA MGP_WSBEiJ_T0048613.1 MGP_WSBEiJ_G0023686.1 mouse_genomes_project 18 45133816 45143315 + MGP_WSBEiJ_P0048613 Arl14epl protein_coding protein_coding MGP_WSBEiJ_T0048611.1 MGP_WSBEiJ_G0023684.1 mouse_genomes_project 18 44940854 44985503 + MGP_WSBEiJ_P0048611 Ap3s1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048062.1 MGP_WSBEiJ_G0023449.1 mouse_genomes_project 18 17762533 17801394 + MGP_WSBEiJ_P0048062 Dsg4 protein_coding protein_coding MGP_WSBEiJ_T0049209.1 MGP_WSBEiJ_G0023873.1 mouse_genomes_project 18 83979418 84056827 - MGP_WSBEiJ_P0049209 Tshz1 protein_coding protein_coding MGP_WSBEiJ_T0049210.1 MGP_WSBEiJ_G0023873.1 mouse_genomes_project 18 83979873 84056813 - Tshz1 protein_coding processed_transcript MGP_WSBEiJ_T0003748.1 MGP_WSBEiJ_G0003369.1 mouse_genomes_project 18 60670393 60672258 + 1500015A07Rik antisense antisense MGP_WSBEiJ_T0003749.1 MGP_WSBEiJ_G0003369.1 mouse_genomes_project 18 60670436 60681104 + 1500015A07Rik antisense antisense MGP_WSBEiJ_T0003750.1 MGP_WSBEiJ_G0003369.1 mouse_genomes_project 18 60679545 60681096 + 1500015A07Rik antisense antisense MGP_WSBEiJ_T0048805.1 MGP_WSBEiJ_G0023755.1 mouse_genomes_project 18 60654713 60670335 - MGP_WSBEiJ_P0048805 protein_coding protein_coding MGP_WSBEiJ_T0097006.1 MGP_WSBEiJ_G0035687.1 mouse_genomes_project 18 56981119 56981223 - Gm25660 rRNA rRNA MGP_WSBEiJ_T0048104.1 MGP_WSBEiJ_G0023466.1 mouse_genomes_project 18 21397287 21403508 - MGP_WSBEiJ_P0048104 Zscan30 protein_coding protein_coding MGP_WSBEiJ_T0048124.1 MGP_WSBEiJ_G0023474.1 mouse_genomes_project 18 22043835 22083031 + MGP_WSBEiJ_P0048124 Elp2 protein_coding protein_coding MGP_WSBEiJ_T0012995.1 MGP_WSBEiJ_G0011125.1 mouse_genomes_project 18 21696210 21697689 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048689.1 MGP_WSBEiJ_G0023712.1 mouse_genomes_project 18 55230703 55258017 + MGP_WSBEiJ_P0048689 Phax protein_coding protein_coding MGP_WSBEiJ_T0048690.1 MGP_WSBEiJ_G0023712.1 mouse_genomes_project 18 55230853 55251136 + MGP_WSBEiJ_P0048690 Phax protein_coding protein_coding MGP_WSBEiJ_T0048691.1 MGP_WSBEiJ_G0023712.1 mouse_genomes_project 18 55241781 55258540 + MGP_WSBEiJ_P0048691 Phax protein_coding protein_coding MGP_WSBEiJ_T0098028.1 MGP_WSBEiJ_G0036691.1 mouse_genomes_project 18 21240839 21240941 - Gm23207 snRNA snRNA MGP_WSBEiJ_T0097200.1 MGP_WSBEiJ_G0035881.1 mouse_genomes_project 18 74350834 74350974 - Gm23119 scaRNA scaRNA MGP_WSBEiJ_T0048545.1 MGP_WSBEiJ_G0023654.1 mouse_genomes_project 18 40742189 41010866 - Ppp2r2b protein_coding processed_transcript MGP_WSBEiJ_T0048546.1 MGP_WSBEiJ_G0023654.1 mouse_genomes_project 18 40751129 41010657 - MGP_WSBEiJ_P0048546 Ppp2r2b protein_coding protein_coding MGP_WSBEiJ_T0048547.1 MGP_WSBEiJ_G0023654.1 mouse_genomes_project 18 40751129 41173838 - MGP_WSBEiJ_P0048547 Ppp2r2b protein_coding protein_coding MGP_WSBEiJ_T0048548.1 MGP_WSBEiJ_G0023654.1 mouse_genomes_project 18 40751156 41011006 - MGP_WSBEiJ_P0048548 Ppp2r2b protein_coding protein_coding MGP_WSBEiJ_T0048549.1 MGP_WSBEiJ_G0023654.1 mouse_genomes_project 18 40849101 41053005 - Ppp2r2b protein_coding processed_transcript MGP_WSBEiJ_T0048550.1 MGP_WSBEiJ_G0023654.1 mouse_genomes_project 18 40869605 41010178 - Ppp2r2b protein_coding processed_transcript MGP_WSBEiJ_T0048385.1 MGP_WSBEiJ_G0023585.1 mouse_genomes_project 18 35216894 35220427 + MGP_WSBEiJ_P0048385 Pcdhb5 protein_coding protein_coding MGP_WSBEiJ_T0000973.1 MGP_WSBEiJ_G0000908.1 mouse_genomes_project 18 33401361 33403521 + TEC TEC MGP_WSBEiJ_T0010107.1 MGP_WSBEiJ_G0008264.1 mouse_genomes_project 18 68432806 68432881 - Mir145b miRNA miRNA MGP_WSBEiJ_T0048920.1 MGP_WSBEiJ_G0023802.1 mouse_genomes_project 18 67136671 67230705 + MGP_WSBEiJ_P0048920 Cep192 protein_coding protein_coding MGP_WSBEiJ_T0048921.1 MGP_WSBEiJ_G0023802.1 mouse_genomes_project 18 67136701 67230711 + MGP_WSBEiJ_P0048921 Cep192 protein_coding unknown_likely_coding MGP_WSBEiJ_T0013029.1 MGP_WSBEiJ_G0011159.1 mouse_genomes_project 18 90423661 90423880 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0099275.1 MGP_WSBEiJ_G0037938.1 mouse_genomes_project 18 32737875 32737945 - Gm26109 snoRNA snoRNA MGP_WSBEiJ_T0048652.1 MGP_WSBEiJ_G0023694.1 mouse_genomes_project 18 48921150 48922192 - MGP_WSBEiJ_P0048652 Hdhd1a protein_coding protein_coding MGP_WSBEiJ_T0048367.1 MGP_WSBEiJ_G0023572.1 mouse_genomes_project 18 34880997 35729278 + MGP_WSBEiJ_P0048367 Gm37013 protein_coding protein_coding MGP_WSBEiJ_T0099289.1 MGP_WSBEiJ_G0037952.1 mouse_genomes_project 18 74595507 74595572 + Gm23301 snoRNA snoRNA MGP_WSBEiJ_T0049045.1 MGP_WSBEiJ_G0023827.1 mouse_genomes_project 18 73829545 73839499 + MGP_WSBEiJ_P0049045 Mbd1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049046.1 MGP_WSBEiJ_G0023827.1 mouse_genomes_project 18 73830188 73844657 + MGP_WSBEiJ_P0049046 Mbd1 protein_coding protein_coding MGP_WSBEiJ_T0006898.1 MGP_WSBEiJ_G0005676.1 mouse_genomes_project 18 2016263 2019074 - Gm26682 lincRNA lincRNA MGP_WSBEiJ_T0099282.1 MGP_WSBEiJ_G0037945.1 mouse_genomes_project 18 54844697 54844832 + Gm23555 snoRNA snoRNA MGP_WSBEiJ_T0048073.1 MGP_WSBEiJ_G0023456.1 mouse_genomes_project 18 18368959 18396378 + MGP_WSBEiJ_P0048073 Rnf138 protein_coding protein_coding MGP_WSBEiJ_T0098052.1 MGP_WSBEiJ_G0036715.1 mouse_genomes_project 18 78369825 78369985 + Gm23895 snRNA snRNA MGP_WSBEiJ_T0003762.1 MGP_WSBEiJ_G0003376.1 mouse_genomes_project 18 84873743 84874654 - Gm16146 antisense antisense MGP_WSBEiJ_T0011262.1 MGP_WSBEiJ_G0009419.1 mouse_genomes_project 18 58535656 58535950 - Gm26028 misc_RNA misc_RNA MGP_WSBEiJ_T0047967.1 MGP_WSBEiJ_G0023417.1 mouse_genomes_project 18 6941194 7061755 - MGP_WSBEiJ_P0047967 Rock1 protein_coding protein_coding MGP_WSBEiJ_T0097000.1 MGP_WSBEiJ_G0035681.1 mouse_genomes_project 18 9641831 9641945 - Gm22340 rRNA rRNA MGP_WSBEiJ_T0006945.1 MGP_WSBEiJ_G0005712.1 mouse_genomes_project 18 81046031 81055862 - 4930594M17Rik lincRNA lincRNA MGP_WSBEiJ_T0048538.1 MGP_WSBEiJ_G0023649.1 mouse_genomes_project 18 40279538 40342592 - MGP_WSBEiJ_P0048538 Lars protein_coding protein_coding MGP_WSBEiJ_T0048902.1 MGP_WSBEiJ_G0023789.1 mouse_genomes_project 18 66101148 66103890 - MGP_WSBEiJ_P0048902 Mc4r protein_coding protein_coding MGP_WSBEiJ_T0047875.1 MGP_WSBEiJ_G0023396.1 mouse_genomes_project 18 1479616 1525132 + MGP_WSBEiJ_P0047875 9430020K01Rik protein_coding protein_coding MGP_WSBEiJ_T0048254.1 MGP_WSBEiJ_G0023532.1 mouse_genomes_project 18 33388457 33422969 + MGP_WSBEiJ_P0048254 Matr3 protein_coding protein_coding MGP_WSBEiJ_T0048255.1 MGP_WSBEiJ_G0023532.1 mouse_genomes_project 18 33388510 33419043 + MGP_WSBEiJ_P0048255 Matr3 protein_coding protein_coding MGP_WSBEiJ_T0048256.1 MGP_WSBEiJ_G0023532.1 mouse_genomes_project 18 33388518 33419043 + MGP_WSBEiJ_P0048256 Matr3 protein_coding protein_coding MGP_WSBEiJ_T0048257.1 MGP_WSBEiJ_G0023532.1 mouse_genomes_project 18 33388598 33419043 + MGP_WSBEiJ_P0048257 Matr3 protein_coding protein_coding MGP_WSBEiJ_T0048258.1 MGP_WSBEiJ_G0023532.1 mouse_genomes_project 18 33388786 33405407 + MGP_WSBEiJ_P0048258 Matr3 protein_coding protein_coding MGP_WSBEiJ_T0048259.1 MGP_WSBEiJ_G0023532.1 mouse_genomes_project 18 33404355 33405675 + Matr3 protein_coding retained_intron MGP_WSBEiJ_T0048260.1 MGP_WSBEiJ_G0023532.1 mouse_genomes_project 18 33405425 33407125 + Matr3 protein_coding retained_intron MGP_WSBEiJ_T0048908.1 MGP_WSBEiJ_G0023793.1 mouse_genomes_project 18 66629782 66666370 + MGP_WSBEiJ_P0048908 Cidea protein_coding protein_coding MGP_WSBEiJ_T0006919.1 MGP_WSBEiJ_G0005692.1 mouse_genomes_project 18 35499677 35500540 + 4930517L18Rik lincRNA lincRNA MGP_WSBEiJ_T0048778.1 MGP_WSBEiJ_G0023746.1 mouse_genomes_project 18 60008028 60034613 + MGP_WSBEiJ_P0048778 Csf1r protein_coding protein_coding MGP_WSBEiJ_T0048779.1 MGP_WSBEiJ_G0023746.1 mouse_genomes_project 18 60008276 60035628 + MGP_WSBEiJ_P0048779 Csf1r protein_coding protein_coding MGP_WSBEiJ_T0048149.1 MGP_WSBEiJ_G0023483.1 mouse_genomes_project 18 29105167 29114778 - MGP_WSBEiJ_P0048149 Syt4 protein_coding protein_coding MGP_WSBEiJ_T0049133.1 MGP_WSBEiJ_G0023853.1 mouse_genomes_project 18 77735315 77749039 - MGP_WSBEiJ_P0049133 Siglec15 protein_coding protein_coding MGP_WSBEiJ_T0011268.1 MGP_WSBEiJ_G0009425.1 mouse_genomes_project 18 84745123 84745413 - Gm22014 misc_RNA misc_RNA MGP_WSBEiJ_T0049065.1 MGP_WSBEiJ_G0023834.1 mouse_genomes_project 18 74613646 74895264 + MGP_WSBEiJ_P0049065 Dym protein_coding protein_coding MGP_WSBEiJ_T0049142.1 MGP_WSBEiJ_G0023859.1 mouse_genomes_project 18 79963355 79971797 - MGP_WSBEiJ_P0049142 Rbfa protein_coding protein_coding MGP_WSBEiJ_T0049020.1 MGP_WSBEiJ_G0023817.1 mouse_genomes_project 18 70729073 71867845 - MGP_WSBEiJ_P0049020 Dcc protein_coding protein_coding MGP_WSBEiJ_T0049021.1 MGP_WSBEiJ_G0023817.1 mouse_genomes_project 18 70729325 71867793 - MGP_WSBEiJ_P0049021 Dcc protein_coding protein_coding MGP_WSBEiJ_T0049022.1 MGP_WSBEiJ_G0023817.1 mouse_genomes_project 18 71446833 71867817 - Dcc protein_coding retained_intron MGP_WSBEiJ_T0048103.1 MGP_WSBEiJ_G0023465.1 mouse_genomes_project 18 21380010 21389995 + MGP_WSBEiJ_P0048103 Zfp397 protein_coding protein_coding MGP_WSBEiJ_T0048242.1 MGP_WSBEiJ_G0023526.1 mouse_genomes_project 18 32730785 32750426 - MGP_WSBEiJ_P0048242 Hspa9 protein_coding protein_coding MGP_WSBEiJ_T0048243.1 MGP_WSBEiJ_G0023526.1 mouse_genomes_project 18 32733496 32734540 - Hspa9 protein_coding retained_intron MGP_WSBEiJ_T0048244.1 MGP_WSBEiJ_G0023526.1 mouse_genomes_project 18 32733925 32736094 - Hspa9 protein_coding retained_intron MGP_WSBEiJ_T0048245.1 MGP_WSBEiJ_G0023526.1 mouse_genomes_project 18 32743398 32747642 - Hspa9 protein_coding retained_intron MGP_WSBEiJ_T0003731.1 MGP_WSBEiJ_G0003354.1 mouse_genomes_project 18 34918507 34933146 - Gm10545 antisense antisense MGP_WSBEiJ_T0097169.1 MGP_WSBEiJ_G0035850.1 mouse_genomes_project 18 24453697 24453925 - Gm26106 ribozyme ribozyme MGP_WSBEiJ_T0048730.1 MGP_WSBEiJ_G0023732.1 mouse_genomes_project 18 59348377 59377801 - MGP_WSBEiJ_P0048730 Smim3 protein_coding protein_coding MGP_WSBEiJ_T0099280.1 MGP_WSBEiJ_G0037943.1 mouse_genomes_project 18 45195721 45195878 - Gm22791 snoRNA snoRNA MGP_WSBEiJ_T0010091.1 MGP_WSBEiJ_G0008248.1 mouse_genomes_project 18 55206050 55206110 + Mir1258 miRNA miRNA MGP_WSBEiJ_T0099266.1 MGP_WSBEiJ_G0037929.1 mouse_genomes_project 18 20568587 20568713 + Gm22495 snoRNA snoRNA MGP_WSBEiJ_T0048518.1 MGP_WSBEiJ_G0023639.1 mouse_genomes_project 18 37384710 37467656 - MGP_WSBEiJ_P0048518 Nr3c1 protein_coding protein_coding MGP_WSBEiJ_T0048519.1 MGP_WSBEiJ_G0023639.1 mouse_genomes_project 18 37384712 37464237 - MGP_WSBEiJ_P0048519 Nr3c1 protein_coding protein_coding MGP_WSBEiJ_T0048520.1 MGP_WSBEiJ_G0023639.1 mouse_genomes_project 18 37386153 37466829 - MGP_WSBEiJ_P0048520 Nr3c1 protein_coding protein_coding MGP_WSBEiJ_T0048521.1 MGP_WSBEiJ_G0023639.1 mouse_genomes_project 18 37388648 37464224 - MGP_WSBEiJ_P0048521 Nr3c1 protein_coding protein_coding MGP_WSBEiJ_T0048522.1 MGP_WSBEiJ_G0023639.1 mouse_genomes_project 18 37399682 37466871 - MGP_WSBEiJ_P0048522 Nr3c1 protein_coding protein_coding MGP_WSBEiJ_T0048523.1 MGP_WSBEiJ_G0023639.1 mouse_genomes_project 18 37463862 37470211 - MGP_WSBEiJ_P0048523 Nr3c1 protein_coding protein_coding MGP_WSBEiJ_T0048524.1 MGP_WSBEiJ_G0023639.1 mouse_genomes_project 18 37464077 37466266 - MGP_WSBEiJ_P0048524 Nr3c1 protein_coding protein_coding MGP_WSBEiJ_T0048525.1 MGP_WSBEiJ_G0023639.1 mouse_genomes_project 18 37464151 37470209 - MGP_WSBEiJ_P0048525 Nr3c1 protein_coding protein_coding MGP_WSBEiJ_T0048428.1 MGP_WSBEiJ_G0023617.1 mouse_genomes_project 18 35625286 35737854 + MGP_WSBEiJ_P0048428 Pcdhgb6 protein_coding protein_coding MGP_WSBEiJ_T0010089.1 MGP_WSBEiJ_G0008246.1 mouse_genomes_project 18 54600402 54600485 - Gm23335 miRNA miRNA MGP_WSBEiJ_T0006903.1 MGP_WSBEiJ_G0005680.1 mouse_genomes_project 18 14012133 14018512 + Gm15328 lincRNA lincRNA MGP_WSBEiJ_T0011255.1 MGP_WSBEiJ_G0009412.1 mouse_genomes_project 18 36532858 36532977 + Gm27804 misc_RNA misc_RNA MGP_WSBEiJ_T0017015.1 MGP_WSBEiJ_G0014778.1 mouse_genomes_project 18 2350380 2451301 - Gm10125 processed_transcript antisense MGP_WSBEiJ_T0017016.1 MGP_WSBEiJ_G0014778.1 mouse_genomes_project 18 2376352 2379059 - Gm10125 processed_transcript retained_intron MGP_WSBEiJ_T0017017.1 MGP_WSBEiJ_G0014778.1 mouse_genomes_project 18 2383242 2451301 - Gm10125 processed_transcript processed_transcript MGP_WSBEiJ_T0017018.1 MGP_WSBEiJ_G0014778.1 mouse_genomes_project 18 2383314 2451099 - Gm10125 processed_transcript antisense MGP_WSBEiJ_T0017019.1 MGP_WSBEiJ_G0014778.1 mouse_genomes_project 18 2423558 2452413 - Gm10125 processed_transcript antisense MGP_WSBEiJ_T0048302.1 MGP_WSBEiJ_G0023547.1 mouse_genomes_project 18 34245184 34268015 + MGP_WSBEiJ_P0048302 Cystm1 protein_coding protein_coding MGP_WSBEiJ_T0048303.1 MGP_WSBEiJ_G0023547.1 mouse_genomes_project 18 34249370 34304632 + MGP_WSBEiJ_P0048303 Cystm1 protein_coding protein_coding MGP_WSBEiJ_T0048304.1 MGP_WSBEiJ_G0023547.1 mouse_genomes_project 18 34249436 34269550 + Cystm1 protein_coding retained_intron MGP_WSBEiJ_T0048305.1 MGP_WSBEiJ_G0023547.1 mouse_genomes_project 18 34249447 34294605 + MGP_WSBEiJ_P0048305 Cystm1 protein_coding protein_coding MGP_WSBEiJ_T0048306.1 MGP_WSBEiJ_G0023547.1 mouse_genomes_project 18 34267075 34304192 + MGP_WSBEiJ_P0048306 Cystm1 protein_coding protein_coding MGP_WSBEiJ_T0006939.1 MGP_WSBEiJ_G0005706.1 mouse_genomes_project 18 65101099 65104009 + Raxos1 lincRNA lincRNA MGP_WSBEiJ_T0047928.1 MGP_WSBEiJ_G0023404.1 mouse_genomes_project 18 3652470 3679979 + MGP_WSBEiJ_P0047928 Rab18 protein_coding protein_coding MGP_WSBEiJ_T0048440.1 MGP_WSBEiJ_G0023624.1 mouse_genomes_project 18 35711308 35737854 + MGP_WSBEiJ_P0048440 Pcdhgc5 protein_coding protein_coding MGP_WSBEiJ_T0048441.1 MGP_WSBEiJ_G0023624.1 mouse_genomes_project 18 35711347 35736032 + MGP_WSBEiJ_P0048441 Pcdhgc5 protein_coding protein_coding MGP_WSBEiJ_T0048442.1 MGP_WSBEiJ_G0023624.1 mouse_genomes_project 18 35711361 35736181 + MGP_WSBEiJ_P0048442 Pcdhgc5 protein_coding protein_coding MGP_WSBEiJ_T0048443.1 MGP_WSBEiJ_G0023624.1 mouse_genomes_project 18 35711449 35736145 + Pcdhgc5 protein_coding retained_intron MGP_WSBEiJ_T0048249.1 MGP_WSBEiJ_G0023530.1 mouse_genomes_project 18 33358577 33358946 + MGP_WSBEiJ_P0048249 Gm5239 protein_coding protein_coding MGP_WSBEiJ_T0048378.1 MGP_WSBEiJ_G0023579.1 mouse_genomes_project 18 34981122 35081773 + MGP_WSBEiJ_P0048378 Pcdhac1 protein_coding protein_coding MGP_WSBEiJ_T0048388.1 MGP_WSBEiJ_G0023587.1 mouse_genomes_project 18 35238690 35243538 + MGP_WSBEiJ_P0048388 Pcdhb7 protein_coding protein_coding MGP_WSBEiJ_T0013024.1 MGP_WSBEiJ_G0011154.1 mouse_genomes_project 18 79608374 79609370 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048765.1 MGP_WSBEiJ_G0023741.1 mouse_genomes_project 18 59806591 59813373 + MGP_WSBEiJ_P0048765 Arsi protein_coding protein_coding MGP_WSBEiJ_T0048656.1 MGP_WSBEiJ_G0023698.1 mouse_genomes_project 18 50961231 50977540 - MGP_WSBEiJ_P0048656 Lox protein_coding protein_coding MGP_WSBEiJ_T0048657.1 MGP_WSBEiJ_G0023698.1 mouse_genomes_project 18 50962400 50976695 - MGP_WSBEiJ_P0048657 Lox protein_coding protein_coding MGP_WSBEiJ_T0012989.1 MGP_WSBEiJ_G0011119.1 mouse_genomes_project 18 9225785 9226506 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048922.1 MGP_WSBEiJ_G0023803.1 mouse_genomes_project 18 67279299 67616751 + MGP_WSBEiJ_P0048922 Ldlrad4 protein_coding protein_coding MGP_WSBEiJ_T0048566.1 MGP_WSBEiJ_G0023662.1 mouse_genomes_project 18 42192778 42197106 + MGP_WSBEiJ_P0048566 Spink14 protein_coding protein_coding MGP_WSBEiJ_T0048567.1 MGP_WSBEiJ_G0023662.1 mouse_genomes_project 18 42193603 42197106 + MGP_WSBEiJ_P0048567 Spink14 protein_coding protein_coding MGP_WSBEiJ_T0048092.1 MGP_WSBEiJ_G0023463.1 mouse_genomes_project 18 20830799 21081344 + MGP_WSBEiJ_P0048092 Dtna protein_coding protein_coding MGP_WSBEiJ_T0048093.1 MGP_WSBEiJ_G0023463.1 mouse_genomes_project 18 20830799 21025957 + MGP_WSBEiJ_P0048093 Dtna protein_coding protein_coding MGP_WSBEiJ_T0048094.1 MGP_WSBEiJ_G0023463.1 mouse_genomes_project 18 21043046 21057415 + MGP_WSBEiJ_P0048094 Dtna protein_coding unknown_likely_coding MGP_WSBEiJ_T0048047.1 MGP_WSBEiJ_G0023442.1 mouse_genomes_project 18 12118170 12220562 - MGP_WSBEiJ_P0048047 Kctd1 protein_coding protein_coding MGP_WSBEiJ_T0048048.1 MGP_WSBEiJ_G0023442.1 mouse_genomes_project 18 12118170 12310443 - MGP_WSBEiJ_P0048048 Kctd1 protein_coding protein_coding MGP_WSBEiJ_T0047874.1 MGP_WSBEiJ_G0023395.1 mouse_genomes_project 18 1220065 1241804 + MGP_WSBEiJ_P0047874 Mtpap protein_coding protein_coding MGP_WSBEiJ_T0048399.1 MGP_WSBEiJ_G0023597.1 mouse_genomes_project 18 35370100 35375141 + MGP_WSBEiJ_P0048399 Pcdhb18 protein_coding protein_coding MGP_WSBEiJ_T0048860.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64719699 64837363 + MGP_WSBEiJ_P0048860 protein_coding protein_coding MGP_WSBEiJ_T0048861.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64719851 64768345 + MGP_WSBEiJ_P0048861 protein_coding protein_coding MGP_WSBEiJ_T0048862.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64720556 64768334 + MGP_WSBEiJ_P0048862 protein_coding protein_coding MGP_WSBEiJ_T0048863.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64720562 64767928 + MGP_WSBEiJ_P0048863 protein_coding protein_coding MGP_WSBEiJ_T0048864.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64721211 64770160 + MGP_WSBEiJ_P0048864 protein_coding protein_coding MGP_WSBEiJ_T0048865.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64721706 64768481 + MGP_WSBEiJ_P0048865 protein_coding protein_coding MGP_WSBEiJ_T0048866.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64721761 64767935 + MGP_WSBEiJ_P0048866 protein_coding protein_coding MGP_WSBEiJ_T0048867.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64721885 64836861 + MGP_WSBEiJ_P0048867 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048868.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64721993 64836860 + MGP_WSBEiJ_P0048868 protein_coding protein_coding MGP_WSBEiJ_T0048869.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64722080 64768134 + MGP_WSBEiJ_P0048869 protein_coding protein_coding MGP_WSBEiJ_T0048870.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64722405 64836854 + MGP_WSBEiJ_P0048870 protein_coding protein_coding MGP_WSBEiJ_T0048871.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64722891 64768100 + MGP_WSBEiJ_P0048871 protein_coding protein_coding MGP_WSBEiJ_T0048872.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64723413 64768045 + MGP_WSBEiJ_P0048872 protein_coding protein_coding MGP_WSBEiJ_T0048873.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64763083 64769752 + protein_coding retained_intron MGP_WSBEiJ_T0048874.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64770065 64831327 + protein_coding retained_intron MGP_WSBEiJ_T0048875.1 MGP_WSBEiJ_G0023780.1 mouse_genomes_project 18 64792299 64833580 + protein_coding processed_transcript MGP_WSBEiJ_T0049227.1 MGP_WSBEiJ_G0023879.1 mouse_genomes_project 18 84866522 84896551 + MGP_WSBEiJ_P0049227 Cyb5a protein_coding protein_coding MGP_WSBEiJ_T0049228.1 MGP_WSBEiJ_G0023879.1 mouse_genomes_project 18 84866561 84895747 + MGP_WSBEiJ_P0049228 Cyb5a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049229.1 MGP_WSBEiJ_G0023879.1 mouse_genomes_project 18 84866591 84888505 + Cyb5a protein_coding retained_intron MGP_WSBEiJ_T0049230.1 MGP_WSBEiJ_G0023879.1 mouse_genomes_project 18 84867063 84896017 + MGP_WSBEiJ_P0049230 Cyb5a protein_coding protein_coding MGP_WSBEiJ_T0049231.1 MGP_WSBEiJ_G0023879.1 mouse_genomes_project 18 84893757 84896019 + Cyb5a protein_coding retained_intron MGP_WSBEiJ_T0048038.1 MGP_WSBEiJ_G0023436.1 mouse_genomes_project 18 10096263 10111918 + MGP_WSBEiJ_P0048038 Hrh4 protein_coding protein_coding MGP_WSBEiJ_T0048377.1 MGP_WSBEiJ_G0023578.1 mouse_genomes_project 18 34932615 35081773 + MGP_WSBEiJ_P0048377 Pcdha12 protein_coding protein_coding MGP_WSBEiJ_T0048152.1 MGP_WSBEiJ_G0023486.1 mouse_genomes_project 18 29317925 29406620 + MGP_WSBEiJ_P0048152 Sap130 protein_coding protein_coding MGP_WSBEiJ_T0048153.1 MGP_WSBEiJ_G0023486.1 mouse_genomes_project 18 29317937 29406620 + MGP_WSBEiJ_P0048153 Sap130 protein_coding protein_coding MGP_WSBEiJ_T0048155.1 MGP_WSBEiJ_G0023488.1 mouse_genomes_project 18 29480923 29488212 + MGP_WSBEiJ_P0048155 Polr2d protein_coding protein_coding MGP_WSBEiJ_T0049030.1 MGP_WSBEiJ_G0023820.1 mouse_genomes_project 18 73269726 73290081 - MGP_WSBEiJ_P0049030 Elac1 protein_coding protein_coding MGP_WSBEiJ_T0048801.1 MGP_WSBEiJ_G0023753.1 mouse_genomes_project 18 60628586 60634258 + MGP_WSBEiJ_P0048801 Il17b protein_coding protein_coding MGP_WSBEiJ_T0006947.1 MGP_WSBEiJ_G0005714.1 mouse_genomes_project 18 82776201 82792911 + 4930445N18Rik lincRNA lincRNA MGP_WSBEiJ_T0006948.1 MGP_WSBEiJ_G0005714.1 mouse_genomes_project 18 82776204 82779473 + 4930445N18Rik lincRNA lincRNA MGP_WSBEiJ_T0048933.1 MGP_WSBEiJ_G0023806.1 mouse_genomes_project 18 67699398 67701507 + MGP_WSBEiJ_P0048933 Mc5r protein_coding protein_coding MGP_WSBEiJ_T0048394.1 MGP_WSBEiJ_G0023592.1 mouse_genomes_project 18 35326892 35330602 + MGP_WSBEiJ_P0048394 Pcdhb13 protein_coding protein_coding MGP_WSBEiJ_T0048844.1 MGP_WSBEiJ_G0023771.1 mouse_genomes_project 18 62732631 63039978 + MGP_WSBEiJ_P0048844 Wdr7 protein_coding protein_coding MGP_WSBEiJ_T0098033.1 MGP_WSBEiJ_G0036696.1 mouse_genomes_project 18 41188842 41188949 - Gm22264 snRNA snRNA MGP_WSBEiJ_T0048444.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35739581 35833457 - MGP_WSBEiJ_P0048444 Diaph1 protein_coding protein_coding MGP_WSBEiJ_T0048445.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35739583 35833404 - MGP_WSBEiJ_P0048445 Diaph1 protein_coding protein_coding MGP_WSBEiJ_T0048446.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35739583 35833362 - MGP_WSBEiJ_P0048446 Diaph1 protein_coding protein_coding MGP_WSBEiJ_T0048447.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35739585 35803436 - MGP_WSBEiJ_P0048447 Diaph1 protein_coding protein_coding MGP_WSBEiJ_T0048448.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35740804 35833392 - MGP_WSBEiJ_P0048448 Diaph1 protein_coding protein_coding MGP_WSBEiJ_T0048449.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35741080 35749372 - Diaph1 protein_coding processed_transcript MGP_WSBEiJ_T0048450.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35750405 35833299 - MGP_WSBEiJ_P0048450 Diaph1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048451.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35751449 35752109 - Diaph1 protein_coding retained_intron MGP_WSBEiJ_T0048452.1 MGP_WSBEiJ_G0023625.1 mouse_genomes_project 18 35793316 35795102 - Diaph1 protein_coding retained_intron MGP_WSBEiJ_T0017043.1 MGP_WSBEiJ_G0014786.1 mouse_genomes_project 18 56086461 56277104 - 4930511M06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017046.1 MGP_WSBEiJ_G0014786.1 mouse_genomes_project 18 56229461 56275608 - 4930511M06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017050.1 MGP_WSBEiJ_G0014786.1 mouse_genomes_project 18 56268579 56275711 - 4930511M06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017051.1 MGP_WSBEiJ_G0014786.1 mouse_genomes_project 18 56271579 56277300 - 4930511M06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0006910.1 MGP_WSBEiJ_G0005685.1 mouse_genomes_project 18 29855415 29862363 + Gm26717 lincRNA lincRNA MGP_WSBEiJ_T0048527.1 MGP_WSBEiJ_G0023641.1 mouse_genomes_project 18 38198524 38219947 - MGP_WSBEiJ_P0048527 Yipf5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048775.1 MGP_WSBEiJ_G0023745.1 mouse_genomes_project 18 59945368 59986558 + MGP_WSBEiJ_P0048775 Pdgfrb protein_coding unknown_likely_coding MGP_WSBEiJ_T0048776.1 MGP_WSBEiJ_G0023745.1 mouse_genomes_project 18 59945445 59986555 + MGP_WSBEiJ_P0048776 Pdgfrb protein_coding protein_coding MGP_WSBEiJ_T0048777.1 MGP_WSBEiJ_G0023745.1 mouse_genomes_project 18 59945495 59986550 + MGP_WSBEiJ_P0048777 Pdgfrb protein_coding protein_coding MGP_WSBEiJ_T0048345.1 MGP_WSBEiJ_G0023562.1 mouse_genomes_project 18 34685730 34704845 - MGP_WSBEiJ_P0048345 Hars protein_coding protein_coding MGP_WSBEiJ_T0013013.1 MGP_WSBEiJ_G0011143.1 mouse_genomes_project 18 46883637 46884643 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011257.1 MGP_WSBEiJ_G0009414.1 mouse_genomes_project 18 39017936 39018210 + Gm22483 misc_RNA misc_RNA MGP_WSBEiJ_T0049250.1 MGP_WSBEiJ_G0023887.1 mouse_genomes_project 18 89425721 89914424 - MGP_WSBEiJ_P0049250 Dok6 protein_coding protein_coding MGP_WSBEiJ_T0049251.1 MGP_WSBEiJ_G0023887.1 mouse_genomes_project 18 89600178 89711129 - Dok6 protein_coding retained_intron MGP_WSBEiJ_T0097009.1 MGP_WSBEiJ_G0035690.1 mouse_genomes_project 18 68985635 68985744 + Gm24845 rRNA rRNA MGP_WSBEiJ_T0049252.1 MGP_WSBEiJ_G0023888.1 mouse_genomes_project 18 90600994 90636088 + MGP_WSBEiJ_P0049252 Tmx3 protein_coding protein_coding MGP_WSBEiJ_T0048558.1 MGP_WSBEiJ_G0023657.1 mouse_genomes_project 18 41677799 41841267 - MGP_WSBEiJ_P0048558 Jakmip2 protein_coding protein_coding MGP_WSBEiJ_T0099273.1 MGP_WSBEiJ_G0037936.1 mouse_genomes_project 18 31835268 31835394 + Gm24432 snoRNA snoRNA MGP_WSBEiJ_T0012990.1 MGP_WSBEiJ_G0011120.1 mouse_genomes_project 18 9341768 9344804 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048407.1 MGP_WSBEiJ_G0023604.1 mouse_genomes_project 18 35537698 35737854 + MGP_WSBEiJ_P0048407 Pcdhga1 protein_coding protein_coding MGP_WSBEiJ_T0048408.1 MGP_WSBEiJ_G0023604.1 mouse_genomes_project 18 35537698 35540945 + MGP_WSBEiJ_P0048408 Pcdhga1 protein_coding protein_coding MGP_WSBEiJ_T0048680.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55175332 55194447 - Aldh7a1 protein_coding processed_transcript MGP_WSBEiJ_T0048681.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55191155 55241911 - MGP_WSBEiJ_P0048681 Aldh7a1 protein_coding protein_coding MGP_WSBEiJ_T0048682.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55194202 55230589 - MGP_WSBEiJ_P0048682 Aldh7a1 protein_coding protein_coding MGP_WSBEiJ_T0048683.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55194341 55230570 - MGP_WSBEiJ_P0048683 Aldh7a1 protein_coding protein_coding MGP_WSBEiJ_T0048684.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55194347 55230479 - MGP_WSBEiJ_P0048684 Aldh7a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048685.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55200492 55205529 - Aldh7a1 protein_coding retained_intron MGP_WSBEiJ_T0048686.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55205159 55230487 - MGP_WSBEiJ_P0048686 Aldh7a1 protein_coding protein_coding MGP_WSBEiJ_T0048687.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55214528 55227687 - Aldh7a1 protein_coding retained_intron MGP_WSBEiJ_T0048688.1 MGP_WSBEiJ_G0023711.1 mouse_genomes_project 18 55217900 55230458 - MGP_WSBEiJ_P0048688 Aldh7a1 protein_coding protein_coding MGP_WSBEiJ_T0048273.1 MGP_WSBEiJ_G0023536.1 mouse_genomes_project 18 33485266 33490154 - MGP_WSBEiJ_P0048273 Prob1 protein_coding protein_coding MGP_WSBEiJ_T0048274.1 MGP_WSBEiJ_G0023536.1 mouse_genomes_project 18 33485270 33486922 - Prob1 protein_coding processed_transcript MGP_WSBEiJ_T0048275.1 MGP_WSBEiJ_G0023536.1 mouse_genomes_project 18 33487082 33490103 - MGP_WSBEiJ_P0048275 Prob1 protein_coding protein_coding MGP_WSBEiJ_T0048914.1 MGP_WSBEiJ_G0023799.1 mouse_genomes_project 18 66960224 66975563 + MGP_WSBEiJ_P0048914 Psmg2 protein_coding protein_coding MGP_WSBEiJ_T0011266.1 MGP_WSBEiJ_G0009423.1 mouse_genomes_project 18 73142708 73142815 + Gm26438 misc_RNA misc_RNA MGP_WSBEiJ_T0048816.1 MGP_WSBEiJ_G0023763.1 mouse_genomes_project 18 61573828 61577680 - MGP_WSBEiJ_P0048816 Spink7 protein_coding protein_coding MGP_WSBEiJ_T0048733.1 MGP_WSBEiJ_G0023734.1 mouse_genomes_project 18 59433877 59446625 + MGP_WSBEiJ_P0048733 Rbm22 protein_coding protein_coding MGP_WSBEiJ_T0048734.1 MGP_WSBEiJ_G0023734.1 mouse_genomes_project 18 59433905 59434628 + Rbm22 protein_coding retained_intron MGP_WSBEiJ_T0048735.1 MGP_WSBEiJ_G0023734.1 mouse_genomes_project 18 59433909 59444123 + Rbm22 protein_coding retained_intron MGP_WSBEiJ_T0048736.1 MGP_WSBEiJ_G0023734.1 mouse_genomes_project 18 59444230 59444955 + Rbm22 protein_coding retained_intron MGP_WSBEiJ_T0048737.1 MGP_WSBEiJ_G0023734.1 mouse_genomes_project 18 59444413 59445807 + Rbm22 protein_coding retained_intron MGP_WSBEiJ_T0098039.1 MGP_WSBEiJ_G0036702.1 mouse_genomes_project 18 50590289 50590396 - Gm22259 snRNA snRNA MGP_WSBEiJ_T0010105.1 MGP_WSBEiJ_G0008262.1 mouse_genomes_project 18 67622176 67622230 - Mir7219 miRNA miRNA MGP_WSBEiJ_T0048279.1 MGP_WSBEiJ_G0023539.1 mouse_genomes_project 18 33550994 33581425 + 1700066B19Rik protein_coding processed_transcript MGP_WSBEiJ_T0048286.1 MGP_WSBEiJ_G0023539.1 mouse_genomes_project 18 33578791 33582524 + MGP_WSBEiJ_P0048286 1700066B19Rik protein_coding protein_coding MGP_WSBEiJ_T0003755.1 MGP_WSBEiJ_G0003371.1 mouse_genomes_project 18 69401225 69429714 - 1700061H18Rik antisense antisense MGP_WSBEiJ_T0003756.1 MGP_WSBEiJ_G0003371.1 mouse_genomes_project 18 69404844 69429701 - 1700061H18Rik antisense antisense MGP_WSBEiJ_T0047995.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9211157 9232837 + 3110002H16Rik protein_coding retained_intron MGP_WSBEiJ_T0047996.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9211157 9241683 + MGP_WSBEiJ_P0047996 3110002H16Rik protein_coding protein_coding MGP_WSBEiJ_T0047997.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9211179 9232300 + 3110002H16Rik protein_coding retained_intron MGP_WSBEiJ_T0047998.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9211192 9241660 + 3110002H16Rik protein_coding retained_intron MGP_WSBEiJ_T0047999.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9231305 9236634 + MGP_WSBEiJ_P0047999 3110002H16Rik protein_coding protein_coding MGP_WSBEiJ_T0048000.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9232253 9239907 + MGP_WSBEiJ_P0048000 3110002H16Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048001.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9237111 9241660 + 3110002H16Rik protein_coding retained_intron MGP_WSBEiJ_T0048002.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9237335 9241617 + 3110002H16Rik protein_coding retained_intron MGP_WSBEiJ_T0048003.1 MGP_WSBEiJ_G0023428.1 mouse_genomes_project 18 9240679 9241660 + 3110002H16Rik protein_coding retained_intron MGP_WSBEiJ_T0048039.1 MGP_WSBEiJ_G0023437.1 mouse_genomes_project 18 10777376 11068547 - MGP_WSBEiJ_P0048039 Zfp521 protein_coding protein_coding MGP_WSBEiJ_T0048037.1 MGP_WSBEiJ_G0023435.1 mouse_genomes_project 18 10060649 10082203 + MGP_WSBEiJ_P0048037 Impact protein_coding protein_coding MGP_WSBEiJ_T0010086.1 MGP_WSBEiJ_G0008243.1 mouse_genomes_project 18 35888860 35888919 - Mir6980 miRNA miRNA MGP_WSBEiJ_T0048019.1 MGP_WSBEiJ_G0023433.1 mouse_genomes_project 18 9811937 9825795 + MGP_WSBEiJ_P0048019 Cabyr protein_coding protein_coding MGP_WSBEiJ_T0048020.1 MGP_WSBEiJ_G0023433.1 mouse_genomes_project 18 9811960 9825789 + MGP_WSBEiJ_P0048020 Cabyr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048021.1 MGP_WSBEiJ_G0023433.1 mouse_genomes_project 18 9811962 9825789 + MGP_WSBEiJ_P0048021 Cabyr protein_coding protein_coding MGP_WSBEiJ_T0048022.1 MGP_WSBEiJ_G0023433.1 mouse_genomes_project 18 9811968 9825791 + MGP_WSBEiJ_P0048022 Cabyr protein_coding protein_coding MGP_WSBEiJ_T0048023.1 MGP_WSBEiJ_G0023433.1 mouse_genomes_project 18 9811968 9825791 + MGP_WSBEiJ_P0048023 Cabyr protein_coding protein_coding MGP_WSBEiJ_T0048024.1 MGP_WSBEiJ_G0023433.1 mouse_genomes_project 18 9811968 9825791 + MGP_WSBEiJ_P0048024 Cabyr protein_coding protein_coding MGP_WSBEiJ_T0099281.1 MGP_WSBEiJ_G0037944.1 mouse_genomes_project 18 53679374 53679467 - Gm24183 snoRNA snoRNA MGP_WSBEiJ_T0048248.1 MGP_WSBEiJ_G0023529.1 mouse_genomes_project 18 33079390 33322622 - MGP_WSBEiJ_P0048248 Sil1 protein_coding protein_coding MGP_WSBEiJ_T0048151.1 MGP_WSBEiJ_G0023485.1 mouse_genomes_project 18 29292327 29293567 + MGP_WSBEiJ_P0048151 B930094E09Rik protein_coding protein_coding MGP_WSBEiJ_T0048372.1 MGP_WSBEiJ_G0023577.1 mouse_genomes_project 18 34920352 34926521 + Pcdha11 protein_coding retained_intron MGP_WSBEiJ_T0048373.1 MGP_WSBEiJ_G0023577.1 mouse_genomes_project 18 34920354 35053342 + Pcdha11 protein_coding retained_intron MGP_WSBEiJ_T0048374.1 MGP_WSBEiJ_G0023577.1 mouse_genomes_project 18 34920392 35081773 + MGP_WSBEiJ_P0048374 Pcdha11 protein_coding protein_coding MGP_WSBEiJ_T0048375.1 MGP_WSBEiJ_G0023577.1 mouse_genomes_project 18 34920472 35081504 + MGP_WSBEiJ_P0048375 Pcdha11 protein_coding protein_coding MGP_WSBEiJ_T0048376.1 MGP_WSBEiJ_G0023577.1 mouse_genomes_project 18 34923409 35079330 + MGP_WSBEiJ_P0048376 Pcdha11 protein_coding protein_coding MGP_WSBEiJ_T0048141.1 MGP_WSBEiJ_G0023481.1 mouse_genomes_project 18 27884783 27962412 + MGP_WSBEiJ_P0048141 Pik3c3 protein_coding protein_coding MGP_WSBEiJ_T0048142.1 MGP_WSBEiJ_G0023481.1 mouse_genomes_project 18 27884906 27945158 + MGP_WSBEiJ_P0048142 Pik3c3 protein_coding protein_coding MGP_WSBEiJ_T0048143.1 MGP_WSBEiJ_G0023481.1 mouse_genomes_project 18 27884908 27957327 + MGP_WSBEiJ_P0048143 Pik3c3 protein_coding protein_coding MGP_WSBEiJ_T0048144.1 MGP_WSBEiJ_G0023481.1 mouse_genomes_project 18 27884963 27962406 + MGP_WSBEiJ_P0048144 Pik3c3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012996.1 MGP_WSBEiJ_G0011126.1 mouse_genomes_project 18 22866068 22866600 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048532.1 MGP_WSBEiJ_G0023646.1 mouse_genomes_project 18 40133062 40234275 + MGP_WSBEiJ_P0048532 Sh3rf2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048533.1 MGP_WSBEiJ_G0023646.1 mouse_genomes_project 18 40134222 40233763 + MGP_WSBEiJ_P0048533 Sh3rf2 protein_coding protein_coding MGP_WSBEiJ_T0048534.1 MGP_WSBEiJ_G0023646.1 mouse_genomes_project 18 40215366 40231438 + Sh3rf2 protein_coding processed_transcript MGP_WSBEiJ_T0048535.1 MGP_WSBEiJ_G0023646.1 mouse_genomes_project 18 40215454 40228452 + Sh3rf2 protein_coding processed_transcript MGP_WSBEiJ_T0013006.1 MGP_WSBEiJ_G0011136.1 mouse_genomes_project 18 36666201 36666802 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047988.1 MGP_WSBEiJ_G0023424.1 mouse_genomes_project 18 8659156 8771180 + MGP_WSBEiJ_P0047988 Rbbp8 protein_coding protein_coding MGP_WSBEiJ_T0047989.1 MGP_WSBEiJ_G0023424.1 mouse_genomes_project 18 8682537 8771180 + MGP_WSBEiJ_P0047989 Rbbp8 protein_coding protein_coding MGP_WSBEiJ_T0047890.1 MGP_WSBEiJ_G0023398.1 mouse_genomes_project 18 2063705 2188721 - MGP_WSBEiJ_P0047890 Zfp438 protein_coding protein_coding MGP_WSBEiJ_T0048717.1 MGP_WSBEiJ_G0023726.1 mouse_genomes_project 18 57833577 57849347 + MGP_WSBEiJ_P0048717 A730017C20Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048718.1 MGP_WSBEiJ_G0023726.1 mouse_genomes_project 18 57833611 57849347 + MGP_WSBEiJ_P0048718 A730017C20Rik protein_coding protein_coding MGP_WSBEiJ_T0048719.1 MGP_WSBEiJ_G0023726.1 mouse_genomes_project 18 57833791 57849347 + MGP_WSBEiJ_P0048719 A730017C20Rik protein_coding protein_coding MGP_WSBEiJ_T0048720.1 MGP_WSBEiJ_G0023726.1 mouse_genomes_project 18 57833795 57848006 + MGP_WSBEiJ_P0048720 A730017C20Rik protein_coding protein_coding MGP_WSBEiJ_T0048721.1 MGP_WSBEiJ_G0023726.1 mouse_genomes_project 18 57833823 57848209 + MGP_WSBEiJ_P0048721 A730017C20Rik protein_coding protein_coding MGP_WSBEiJ_T0048722.1 MGP_WSBEiJ_G0023726.1 mouse_genomes_project 18 57833839 57847049 + A730017C20Rik protein_coding retained_intron MGP_WSBEiJ_T0048723.1 MGP_WSBEiJ_G0023726.1 mouse_genomes_project 18 57833840 57848316 + MGP_WSBEiJ_P0048723 A730017C20Rik protein_coding protein_coding MGP_WSBEiJ_T0048491.1 MGP_WSBEiJ_G0023635.1 mouse_genomes_project 18 36346131 36392650 + MGP_WSBEiJ_P0048491 Ndfip1 protein_coding protein_coding MGP_WSBEiJ_T0048891.1 MGP_WSBEiJ_G0023786.1 mouse_genomes_project 18 65148736 65171930 - MGP_WSBEiJ_P0048891 Lman1 protein_coding protein_coding MGP_WSBEiJ_T0048892.1 MGP_WSBEiJ_G0023786.1 mouse_genomes_project 18 65151189 65171914 - MGP_WSBEiJ_P0048892 Lman1 protein_coding protein_coding MGP_WSBEiJ_T0048893.1 MGP_WSBEiJ_G0023786.1 mouse_genomes_project 18 65158297 65164205 - Lman1 protein_coding processed_transcript MGP_WSBEiJ_T0048894.1 MGP_WSBEiJ_G0023786.1 mouse_genomes_project 18 65160452 65162961 - Lman1 protein_coding retained_intron MGP_WSBEiJ_T0048895.1 MGP_WSBEiJ_G0023786.1 mouse_genomes_project 18 65162438 65193137 - MGP_WSBEiJ_P0048895 Lman1 protein_coding protein_coding MGP_WSBEiJ_T0048896.1 MGP_WSBEiJ_G0023786.1 mouse_genomes_project 18 65162891 65190389 - Lman1 protein_coding processed_transcript MGP_WSBEiJ_T0048423.1 MGP_WSBEiJ_G0023614.1 mouse_genomes_project 18 35607753 35737854 + MGP_WSBEiJ_P0048423 Pcdhga8 protein_coding protein_coding MGP_WSBEiJ_T0048041.1 MGP_WSBEiJ_G0023439.1 mouse_genomes_project 18 11764696 11826321 - MGP_WSBEiJ_P0048041 Ss18 protein_coding protein_coding MGP_WSBEiJ_T0048042.1 MGP_WSBEiJ_G0023439.1 mouse_genomes_project 18 11788561 11826290 - MGP_WSBEiJ_P0048042 Ss18 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048043.1 MGP_WSBEiJ_G0023439.1 mouse_genomes_project 18 11792298 11826290 - MGP_WSBEiJ_P0048043 Ss18 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048673.1 MGP_WSBEiJ_G0023706.1 mouse_genomes_project 18 51974673 52092730 + MGP_WSBEiJ_P0048673 Prdm6 protein_coding protein_coding MGP_WSBEiJ_T0048674.1 MGP_WSBEiJ_G0023706.1 mouse_genomes_project 18 51975833 52092681 + MGP_WSBEiJ_P0048674 Prdm6 protein_coding protein_coding MGP_WSBEiJ_T0048675.1 MGP_WSBEiJ_G0023706.1 mouse_genomes_project 18 52071360 52092681 + MGP_WSBEiJ_P0048675 Prdm6 protein_coding protein_coding MGP_WSBEiJ_T0048106.1 MGP_WSBEiJ_G0023468.1 mouse_genomes_project 18 21433528 21446018 - MGP_WSBEiJ_P0048106 Zfp24 protein_coding protein_coding MGP_WSBEiJ_T0048107.1 MGP_WSBEiJ_G0023468.1 mouse_genomes_project 18 21437752 21445528 - MGP_WSBEiJ_P0048107 Zfp24 protein_coding protein_coding MGP_WSBEiJ_T0048108.1 MGP_WSBEiJ_G0023468.1 mouse_genomes_project 18 21441800 21445578 - MGP_WSBEiJ_P0048108 Zfp24 protein_coding protein_coding MGP_WSBEiJ_T0047936.1 MGP_WSBEiJ_G0023407.1 mouse_genomes_project 18 4168937 4473094 - MGP_WSBEiJ_P0047936 Mpp7 protein_coding protein_coding MGP_WSBEiJ_T0049157.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80029371 80071011 + MGP_WSBEiJ_P0049157 Pqlc1 protein_coding protein_coding MGP_WSBEiJ_T0049158.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80029421 80061759 + MGP_WSBEiJ_P0049158 Pqlc1 protein_coding protein_coding MGP_WSBEiJ_T0049159.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80031298 80071099 + MGP_WSBEiJ_P0049159 Pqlc1 protein_coding protein_coding MGP_WSBEiJ_T0049160.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80031884 80062445 + MGP_WSBEiJ_P0049160 Pqlc1 protein_coding protein_coding MGP_WSBEiJ_T0049161.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80032332 80071090 + MGP_WSBEiJ_P0049161 Pqlc1 protein_coding protein_coding MGP_WSBEiJ_T0049162.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80032336 80053526 + Pqlc1 protein_coding retained_intron MGP_WSBEiJ_T0049163.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80032354 80071098 + MGP_WSBEiJ_P0049163 Pqlc1 protein_coding protein_coding MGP_WSBEiJ_T0049164.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80032355 80051736 + Pqlc1 protein_coding retained_intron MGP_WSBEiJ_T0049165.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80032355 80071088 + MGP_WSBEiJ_P0049165 Pqlc1 protein_coding protein_coding MGP_WSBEiJ_T0049166.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80032366 80071086 + MGP_WSBEiJ_P0049166 Pqlc1 protein_coding protein_coding MGP_WSBEiJ_T0049167.1 MGP_WSBEiJ_G0023863.1 mouse_genomes_project 18 80040758 80041400 + Pqlc1 protein_coding processed_transcript MGP_WSBEiJ_T0048679.1 MGP_WSBEiJ_G0023710.1 mouse_genomes_project 18 55091360 55169473 + MGP_WSBEiJ_P0048679 Gramd3 protein_coding protein_coding MGP_WSBEiJ_T0013000.1 MGP_WSBEiJ_G0011130.1 mouse_genomes_project 18 33624426 33624777 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011247.1 MGP_WSBEiJ_G0009404.1 mouse_genomes_project 18 14309226 14309453 - Gm24015 misc_RNA misc_RNA MGP_WSBEiJ_T0010095.1 MGP_WSBEiJ_G0008252.1 mouse_genomes_project 18 59700693 59700781 + Mir5107 miRNA miRNA MGP_WSBEiJ_T0098058.1 MGP_WSBEiJ_G0036721.1 mouse_genomes_project 18 90360284 90360348 + Gm23859 snRNA snRNA MGP_WSBEiJ_T0048858.1 MGP_WSBEiJ_G0023779.1 mouse_genomes_project 18 64554556 64604585 + MGP_WSBEiJ_P0048858 Malt1 protein_coding protein_coding MGP_WSBEiJ_T0048859.1 MGP_WSBEiJ_G0023779.1 mouse_genomes_project 18 64554765 64602185 + MGP_WSBEiJ_P0048859 Malt1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000983.1 MGP_WSBEiJ_G0000918.1 mouse_genomes_project 18 80144134 80147180 + TEC TEC MGP_WSBEiJ_T0003734.1 MGP_WSBEiJ_G0003357.1 mouse_genomes_project 18 35537857 35538538 - Gm37118 antisense antisense MGP_WSBEiJ_T0010103.1 MGP_WSBEiJ_G0008260.1 mouse_genomes_project 18 64376149 64376215 + Mir122 miRNA miRNA MGP_WSBEiJ_T0099269.1 MGP_WSBEiJ_G0037932.1 mouse_genomes_project 18 28101575 28101687 + Gm22870 snoRNA snoRNA MGP_WSBEiJ_T0048397.1 MGP_WSBEiJ_G0023595.1 mouse_genomes_project 18 35358415 35363665 + MGP_WSBEiJ_P0048397 Pcdhb16 protein_coding protein_coding MGP_WSBEiJ_T0098044.1 MGP_WSBEiJ_G0036707.1 mouse_genomes_project 18 62540252 62540315 + Gm23581 snRNA snRNA MGP_WSBEiJ_T0013009.1 MGP_WSBEiJ_G0011139.1 mouse_genomes_project 18 38764376 38764817 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006944.1 MGP_WSBEiJ_G0005711.1 mouse_genomes_project 18 77445795 77449585 - A330094K24Rik lincRNA lincRNA MGP_WSBEiJ_T0048559.1 MGP_WSBEiJ_G0023658.1 mouse_genomes_project 18 41877063 41886260 - MGP_WSBEiJ_P0048559 Spink1 protein_coding protein_coding MGP_WSBEiJ_T0049010.1 MGP_WSBEiJ_G0023815.1 mouse_genomes_project 18 69977224 69992854 - MGP_WSBEiJ_P0049010 Poli protein_coding protein_coding MGP_WSBEiJ_T0049011.1 MGP_WSBEiJ_G0023815.1 mouse_genomes_project 18 69977227 69993338 - MGP_WSBEiJ_P0049011 Poli protein_coding protein_coding MGP_WSBEiJ_T0049012.1 MGP_WSBEiJ_G0023815.1 mouse_genomes_project 18 69977228 69993150 - MGP_WSBEiJ_P0049012 Poli protein_coding protein_coding MGP_WSBEiJ_T0049013.1 MGP_WSBEiJ_G0023815.1 mouse_genomes_project 18 69977229 69992854 - MGP_WSBEiJ_P0049013 Poli protein_coding protein_coding MGP_WSBEiJ_T0049014.1 MGP_WSBEiJ_G0023815.1 mouse_genomes_project 18 69977231 69992984 - MGP_WSBEiJ_P0049014 Poli protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048206.1 MGP_WSBEiJ_G0023513.1 mouse_genomes_project 18 32292229 32298183 + MGP_WSBEiJ_P0048206 Wnt8a protein_coding protein_coding MGP_WSBEiJ_T0048261.1 MGP_WSBEiJ_G0023533.1 mouse_genomes_project 18 33427726 33451699 + MGP_WSBEiJ_P0048261 Paip2 protein_coding protein_coding MGP_WSBEiJ_T0048262.1 MGP_WSBEiJ_G0023533.1 mouse_genomes_project 18 33427733 33450863 + MGP_WSBEiJ_P0048262 Paip2 protein_coding protein_coding MGP_WSBEiJ_T0048263.1 MGP_WSBEiJ_G0023533.1 mouse_genomes_project 18 33427750 33451032 + MGP_WSBEiJ_P0048263 Paip2 protein_coding protein_coding MGP_WSBEiJ_T0048264.1 MGP_WSBEiJ_G0023533.1 mouse_genomes_project 18 33427758 33451696 + MGP_WSBEiJ_P0048264 Paip2 protein_coding protein_coding MGP_WSBEiJ_T0048265.1 MGP_WSBEiJ_G0023533.1 mouse_genomes_project 18 33428346 33450908 + MGP_WSBEiJ_P0048265 Paip2 protein_coding protein_coding MGP_WSBEiJ_T0048266.1 MGP_WSBEiJ_G0023533.1 mouse_genomes_project 18 33439390 33442532 + Paip2 protein_coding retained_intron MGP_WSBEiJ_T0048267.1 MGP_WSBEiJ_G0023533.1 mouse_genomes_project 18 33440091 33447388 + Paip2 protein_coding retained_intron MGP_WSBEiJ_T0017059.1 MGP_WSBEiJ_G0014790.1 mouse_genomes_project 18 74981662 74983408 - Gm20544 processed_transcript processed_transcript MGP_WSBEiJ_T0012992.1 MGP_WSBEiJ_G0011122.1 mouse_genomes_project 18 14034908 14035549 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048607.1 MGP_WSBEiJ_G0023681.1 mouse_genomes_project 18 44790712 44806416 + MGP_WSBEiJ_P0048607 Eif1a protein_coding protein_coding MGP_WSBEiJ_T0048608.1 MGP_WSBEiJ_G0023681.1 mouse_genomes_project 18 44790716 44805362 + MGP_WSBEiJ_P0048608 Eif1a protein_coding protein_coding MGP_WSBEiJ_T0048581.1 MGP_WSBEiJ_G0023672.1 mouse_genomes_project 18 42589906 42986554 - MGP_WSBEiJ_P0048581 Mcc protein_coding protein_coding MGP_WSBEiJ_T0048582.1 MGP_WSBEiJ_G0023672.1 mouse_genomes_project 18 42594061 42834073 - MGP_WSBEiJ_P0048582 Mcc protein_coding protein_coding MGP_WSBEiJ_T0048583.1 MGP_WSBEiJ_G0023672.1 mouse_genomes_project 18 42684518 42687198 - Mcc protein_coding retained_intron MGP_WSBEiJ_T0048584.1 MGP_WSBEiJ_G0023672.1 mouse_genomes_project 18 42830421 42834091 - Mcc protein_coding retained_intron MGP_WSBEiJ_T0048585.1 MGP_WSBEiJ_G0023672.1 mouse_genomes_project 18 42887454 42900639 - Mcc protein_coding processed_transcript MGP_WSBEiJ_T0013026.1 MGP_WSBEiJ_G0011156.1 mouse_genomes_project 18 89678647 89679106 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048163.1 MGP_WSBEiJ_G0023494.1 mouse_genomes_project 18 29658306 29739224 - MGP_WSBEiJ_P0048163 Myo7b protein_coding protein_coding MGP_WSBEiJ_T0047866.1 MGP_WSBEiJ_G0023392.1 mouse_genomes_project 18 337777 346224 + MGP_WSBEiJ_P0047866 Bambi protein_coding protein_coding MGP_WSBEiJ_T0047917.1 MGP_WSBEiJ_G0023401.1 mouse_genomes_project 18 3072208 3115231 - MGP_WSBEiJ_P0047917 Kif5b protein_coding protein_coding MGP_WSBEiJ_T0047918.1 MGP_WSBEiJ_G0023401.1 mouse_genomes_project 18 3074234 3087578 - Kif5b protein_coding retained_intron MGP_WSBEiJ_T0047919.1 MGP_WSBEiJ_G0023401.1 mouse_genomes_project 18 3086483 3097055 - Kif5b protein_coding retained_intron MGP_WSBEiJ_T0047920.1 MGP_WSBEiJ_G0023401.1 mouse_genomes_project 18 3087606 3115178 - MGP_WSBEiJ_P0047920 Kif5b protein_coding protein_coding MGP_WSBEiJ_T0047921.1 MGP_WSBEiJ_G0023401.1 mouse_genomes_project 18 3093885 3096064 - Kif5b protein_coding retained_intron MGP_WSBEiJ_T0047922.1 MGP_WSBEiJ_G0023401.1 mouse_genomes_project 18 3115021 3115884 - Kif5b protein_coding processed_transcript MGP_WSBEiJ_T0003716.1 MGP_WSBEiJ_G0003343.1 mouse_genomes_project 18 3086950 3100350 + Gm17036 antisense antisense MGP_WSBEiJ_T0048419.1 MGP_WSBEiJ_G0023612.1 mouse_genomes_project 18 35596830 35737854 + MGP_WSBEiJ_P0048419 Pcdhga7 protein_coding protein_coding MGP_WSBEiJ_T0048420.1 MGP_WSBEiJ_G0023612.1 mouse_genomes_project 18 35596884 35599928 + MGP_WSBEiJ_P0048420 Pcdhga7 protein_coding protein_coding MGP_WSBEiJ_T0010077.1 MGP_WSBEiJ_G0008234.1 mouse_genomes_project 18 9781431 9781516 + Mir1948 miRNA miRNA MGP_WSBEiJ_T0048061.1 MGP_WSBEiJ_G0023448.1 mouse_genomes_project 18 17337233 17368866 - MGP_WSBEiJ_P0048061 Dsc1 protein_coding protein_coding MGP_WSBEiJ_T0098041.1 MGP_WSBEiJ_G0036704.1 mouse_genomes_project 18 56396144 56396250 - Gm26038 snRNA snRNA MGP_WSBEiJ_T0048359.1 MGP_WSBEiJ_G0023568.1 mouse_genomes_project 18 34861724 35081773 + MGP_WSBEiJ_P0048359 protein_coding protein_coding MGP_WSBEiJ_T0048360.1 MGP_WSBEiJ_G0023568.1 mouse_genomes_project 18 34861734 34866233 + protein_coding retained_intron MGP_WSBEiJ_T0048361.1 MGP_WSBEiJ_G0023568.1 mouse_genomes_project 18 34863425 35081777 + MGP_WSBEiJ_P0048361 protein_coding protein_coding MGP_WSBEiJ_T0099290.1 MGP_WSBEiJ_G0037953.1 mouse_genomes_project 18 74595931 74595996 + Gm26202 snoRNA snoRNA MGP_WSBEiJ_T0048405.1 MGP_WSBEiJ_G0023602.1 mouse_genomes_project 18 35513371 35514740 - MGP_WSBEiJ_P0048405 Slc25a2 protein_coding protein_coding MGP_WSBEiJ_T0048590.1 MGP_WSBEiJ_G0023674.1 mouse_genomes_project 18 43438821 43462460 + Kcnn2 protein_coding processed_transcript MGP_WSBEiJ_T0048591.1 MGP_WSBEiJ_G0023674.1 mouse_genomes_project 18 43438966 43851473 + MGP_WSBEiJ_P0048591 Kcnn2 protein_coding protein_coding MGP_WSBEiJ_T0048592.1 MGP_WSBEiJ_G0023674.1 mouse_genomes_project 18 43438966 43851614 + MGP_WSBEiJ_P0048592 Kcnn2 protein_coding protein_coding MGP_WSBEiJ_T0048593.1 MGP_WSBEiJ_G0023674.1 mouse_genomes_project 18 43719927 43835921 + Kcnn2 protein_coding retained_intron MGP_WSBEiJ_T0048594.1 MGP_WSBEiJ_G0023674.1 mouse_genomes_project 18 43720269 43753444 + Kcnn2 protein_coding retained_intron MGP_WSBEiJ_T0048595.1 MGP_WSBEiJ_G0023674.1 mouse_genomes_project 18 43720612 43840953 + Kcnn2 protein_coding processed_transcript MGP_WSBEiJ_T0048596.1 MGP_WSBEiJ_G0023674.1 mouse_genomes_project 18 43720612 43851472 + MGP_WSBEiJ_P0048596 Kcnn2 protein_coding protein_coding MGP_WSBEiJ_T0013001.1 MGP_WSBEiJ_G0011131.1 mouse_genomes_project 18 34520730 34521468 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098053.1 MGP_WSBEiJ_G0036716.1 mouse_genomes_project 18 80833722 80833840 + Gm25718 snRNA snRNA MGP_WSBEiJ_T0049023.1 MGP_WSBEiJ_G0023818.1 mouse_genomes_project 18 73103538 73123301 + MGP_WSBEiJ_P0049023 Mex3c protein_coding protein_coding MGP_WSBEiJ_T0099278.1 MGP_WSBEiJ_G0037941.1 mouse_genomes_project 18 35588020 35588111 + Gm24401 snoRNA snoRNA MGP_WSBEiJ_T0048381.1 MGP_WSBEiJ_G0023582.1 mouse_genomes_project 18 35190637 35193451 + MGP_WSBEiJ_P0048381 Pcdhb2 protein_coding protein_coding MGP_WSBEiJ_T0048382.1 MGP_WSBEiJ_G0023582.1 mouse_genomes_project 18 35190665 35192247 + MGP_WSBEiJ_P0048382 Pcdhb2 protein_coding protein_coding MGP_WSBEiJ_T0048213.1 MGP_WSBEiJ_G0023516.1 mouse_genomes_project 18 32363113 32390206 - MGP_WSBEiJ_P0048213 Brd8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048214.1 MGP_WSBEiJ_G0023516.1 mouse_genomes_project 18 32363119 32389993 - MGP_WSBEiJ_P0048214 Brd8 protein_coding protein_coding MGP_WSBEiJ_T0048215.1 MGP_WSBEiJ_G0023516.1 mouse_genomes_project 18 32364119 32389945 - Brd8 protein_coding retained_intron MGP_WSBEiJ_T0048216.1 MGP_WSBEiJ_G0023516.1 mouse_genomes_project 18 32364148 32389993 - MGP_WSBEiJ_P0048216 Brd8 protein_coding protein_coding MGP_WSBEiJ_T0048217.1 MGP_WSBEiJ_G0023516.1 mouse_genomes_project 18 32365464 32389993 - MGP_WSBEiJ_P0048217 Brd8 protein_coding protein_coding MGP_WSBEiJ_T0048218.1 MGP_WSBEiJ_G0023516.1 mouse_genomes_project 18 32375006 32389993 - Brd8 protein_coding retained_intron MGP_WSBEiJ_T0048219.1 MGP_WSBEiJ_G0023516.1 mouse_genomes_project 18 32376001 32389946 - Brd8 protein_coding processed_transcript MGP_WSBEiJ_T0048220.1 MGP_WSBEiJ_G0023516.1 mouse_genomes_project 18 32387304 32389993 - Brd8 protein_coding retained_intron MGP_WSBEiJ_T0048751.1 MGP_WSBEiJ_G0023737.1 mouse_genomes_project 18 59565039 59593468 - MGP_WSBEiJ_P0048751 Ndst1 protein_coding protein_coding MGP_WSBEiJ_T0010100.1 MGP_WSBEiJ_G0008257.1 mouse_genomes_project 18 60324985 60325051 - Mir378a miRNA miRNA MGP_WSBEiJ_T0049112.1 MGP_WSBEiJ_G0023846.1 mouse_genomes_project 18 76949981 77124649 + MGP_WSBEiJ_P0049112 Loxhd1 protein_coding protein_coding MGP_WSBEiJ_T0049113.1 MGP_WSBEiJ_G0023846.1 mouse_genomes_project 18 76977309 77060367 + MGP_WSBEiJ_P0049113 Loxhd1 protein_coding protein_coding MGP_WSBEiJ_T0049114.1 MGP_WSBEiJ_G0023846.1 mouse_genomes_project 18 77007068 77091739 + MGP_WSBEiJ_P0049114 Loxhd1 protein_coding protein_coding MGP_WSBEiJ_T0049115.1 MGP_WSBEiJ_G0023846.1 mouse_genomes_project 18 77053167 77124733 + MGP_WSBEiJ_P0049115 Loxhd1 protein_coding protein_coding MGP_WSBEiJ_T0049116.1 MGP_WSBEiJ_G0023846.1 mouse_genomes_project 18 77089779 77124278 + MGP_WSBEiJ_P0049116 Loxhd1 protein_coding protein_coding MGP_WSBEiJ_T0098057.1 MGP_WSBEiJ_G0036720.1 mouse_genomes_project 18 86364838 86364945 + Gm25453 snRNA snRNA MGP_WSBEiJ_T0006924.1 MGP_WSBEiJ_G0005695.1 mouse_genomes_project 18 42996714 43000005 + Gm43425 lincRNA lincRNA MGP_WSBEiJ_T0048568.1 MGP_WSBEiJ_G0023663.1 mouse_genomes_project 18 42228217 42240426 + MGP_WSBEiJ_P0048568 Spink6 protein_coding protein_coding MGP_WSBEiJ_T0049081.1 MGP_WSBEiJ_G0023839.1 mouse_genomes_project 18 76500342 76547211 + MGP_WSBEiJ_P0049081 Skor2 protein_coding protein_coding MGP_WSBEiJ_T0003732.1 MGP_WSBEiJ_G0003355.1 mouse_genomes_project 18 35066174 35066613 - Gm38097 antisense antisense MGP_WSBEiJ_T0049002.1 MGP_WSBEiJ_G0023812.1 mouse_genomes_project 18 69700706 69704853 - MGP_WSBEiJ_P0049002 Dynap protein_coding protein_coding MGP_WSBEiJ_T0010111.1 MGP_WSBEiJ_G0008268.1 mouse_genomes_project 18 81861794 81861865 - Mir5127 miRNA miRNA MGP_WSBEiJ_T0048288.1 MGP_WSBEiJ_G0023542.1 mouse_genomes_project 18 33625659 33662597 + MGP_WSBEiJ_P0048288 Ube2d2a protein_coding protein_coding MGP_WSBEiJ_T0048289.1 MGP_WSBEiJ_G0023542.1 mouse_genomes_project 18 33625702 33662588 + MGP_WSBEiJ_P0048289 Ube2d2a protein_coding protein_coding MGP_WSBEiJ_T0096800.1 MGP_WSBEiJ_G0035481.1 mouse_genomes_project 18 7026382 7026895 - pseudogene pseudogene MGP_WSBEiJ_T0013003.1 MGP_WSBEiJ_G0011133.1 mouse_genomes_project 18 35201257 35202522 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010112.1 MGP_WSBEiJ_G0008269.1 mouse_genomes_project 18 82633027 82633087 + Mir5112 miRNA miRNA MGP_WSBEiJ_T0048811.1 MGP_WSBEiJ_G0023758.1 mouse_genomes_project 18 60913721 60983162 + MGP_WSBEiJ_P0048811 Sh3tc2 protein_coding protein_coding MGP_WSBEiJ_T0006916.1 MGP_WSBEiJ_G0005690.1 mouse_genomes_project 18 32530406 32536583 + 2010110K18Rik lincRNA lincRNA MGP_WSBEiJ_T0006917.1 MGP_WSBEiJ_G0005690.1 mouse_genomes_project 18 32530509 32541759 + 2010110K18Rik lincRNA lincRNA MGP_WSBEiJ_T0048539.1 MGP_WSBEiJ_G0023650.1 mouse_genomes_project 18 40355734 40425888 + MGP_WSBEiJ_P0048539 Rbm27 protein_coding protein_coding MGP_WSBEiJ_T0048540.1 MGP_WSBEiJ_G0023650.1 mouse_genomes_project 18 40355734 40425888 + MGP_WSBEiJ_P0048540 Rbm27 protein_coding protein_coding MGP_WSBEiJ_T0010078.1 MGP_WSBEiJ_G0008235.1 mouse_genomes_project 18 21871803 21871864 - Mir187 miRNA miRNA MGP_WSBEiJ_T0017028.1 MGP_WSBEiJ_G0014781.1 mouse_genomes_project 18 35630645 35641177 - Gm26672 processed_transcript antisense MGP_WSBEiJ_T0017029.1 MGP_WSBEiJ_G0014781.1 mouse_genomes_project 18 35637350 35652603 - Gm26672 processed_transcript antisense MGP_WSBEiJ_T0017030.1 MGP_WSBEiJ_G0014781.1 mouse_genomes_project 18 35637492 35653304 - Gm26672 processed_transcript antisense MGP_WSBEiJ_T0017031.1 MGP_WSBEiJ_G0014781.1 mouse_genomes_project 18 35640040 35641571 - Gm26672 processed_transcript retained_intron MGP_WSBEiJ_T0048889.1 MGP_WSBEiJ_G0023784.1 mouse_genomes_project 18 65098200 65102651 - MGP_WSBEiJ_P0048889 Rax protein_coding protein_coding MGP_WSBEiJ_T0048919.1 MGP_WSBEiJ_G0023801.1 mouse_genomes_project 18 67107591 67131144 + MGP_WSBEiJ_P0048919 Seh1l protein_coding protein_coding MGP_WSBEiJ_T0048232.1 MGP_WSBEiJ_G0023519.1 mouse_genomes_project 18 32461521 32496552 - MGP_WSBEiJ_P0048232 Gfra3 protein_coding protein_coding MGP_WSBEiJ_T0048150.1 MGP_WSBEiJ_G0023484.1 mouse_genomes_project 18 29261352 29292718 - MGP_WSBEiJ_P0048150 Slc25a46 protein_coding protein_coding MGP_WSBEiJ_T0048853.1 MGP_WSBEiJ_G0023776.1 mouse_genomes_project 18 63603781 63749605 - MGP_WSBEiJ_P0048853 Atp8b1 protein_coding protein_coding MGP_WSBEiJ_T0098051.1 MGP_WSBEiJ_G0036714.1 mouse_genomes_project 18 78249051 78249158 + Gm26430 snRNA snRNA MGP_WSBEiJ_T0013027.1 MGP_WSBEiJ_G0011157.1 mouse_genomes_project 18 90078919 90079877 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048905.1 MGP_WSBEiJ_G0023791.1 mouse_genomes_project 18 66483642 66511375 - MGP_WSBEiJ_P0048905 Mppe1 protein_coding protein_coding MGP_WSBEiJ_T0048906.1 MGP_WSBEiJ_G0023791.1 mouse_genomes_project 18 66484886 66510772 - MGP_WSBEiJ_P0048906 Mppe1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0003739.1 MGP_WSBEiJ_G0003362.1 mouse_genomes_project 18 37214566 37270910 - Gm15336 antisense antisense MGP_WSBEiJ_T0049042.1 MGP_WSBEiJ_G0023825.1 mouse_genomes_project 18 73758904 73771768 - MGP_WSBEiJ_P0049042 Ska1 protein_coding protein_coding MGP_WSBEiJ_T0049043.1 MGP_WSBEiJ_G0023825.1 mouse_genomes_project 18 73758904 73771768 - MGP_WSBEiJ_P0049043 Ska1 protein_coding protein_coding MGP_WSBEiJ_T0048112.1 MGP_WSBEiJ_G0023470.1 mouse_genomes_project 18 21638267 21726656 + MGP_WSBEiJ_P0048112 Galnt1 protein_coding protein_coding MGP_WSBEiJ_T0048113.1 MGP_WSBEiJ_G0023470.1 mouse_genomes_project 18 21638690 21726648 + MGP_WSBEiJ_P0048113 Galnt1 protein_coding protein_coding MGP_WSBEiJ_T0048114.1 MGP_WSBEiJ_G0023470.1 mouse_genomes_project 18 21640621 21693463 + MGP_WSBEiJ_P0048114 Galnt1 protein_coding protein_coding MGP_WSBEiJ_T0048115.1 MGP_WSBEiJ_G0023470.1 mouse_genomes_project 18 21669102 21726648 + MGP_WSBEiJ_P0048115 Galnt1 protein_coding protein_coding MGP_WSBEiJ_T0048116.1 MGP_WSBEiJ_G0023470.1 mouse_genomes_project 18 21675868 21706375 + MGP_WSBEiJ_P0048116 Galnt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048117.1 MGP_WSBEiJ_G0023470.1 mouse_genomes_project 18 21683408 21710377 + MGP_WSBEiJ_P0048117 Galnt1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0012988.1 MGP_WSBEiJ_G0011118.1 mouse_genomes_project 18 6785101 6789404 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048246.1 MGP_WSBEiJ_G0023527.1 mouse_genomes_project 18 32926815 33068109 + MGP_WSBEiJ_P0048246 Ctnna1 protein_coding protein_coding MGP_WSBEiJ_T0097003.1 MGP_WSBEiJ_G0035684.1 mouse_genomes_project 18 32265466 32265583 + n-R5s24 rRNA rRNA MGP_WSBEiJ_T0048614.1 MGP_WSBEiJ_G0023687.1 mouse_genomes_project 18 45170007 45309320 + MGP_WSBEiJ_P0048614 Commd10 protein_coding protein_coding MGP_WSBEiJ_T0048338.1 MGP_WSBEiJ_G0023558.1 mouse_genomes_project 18 34661550 34663749 - MGP_WSBEiJ_P0048338 Ndufa2 protein_coding protein_coding MGP_WSBEiJ_T0048833.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62014080 62266766 - MGP_WSBEiJ_P0048833 Piezo2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048834.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62014084 62419068 - MGP_WSBEiJ_P0048834 Piezo2 protein_coding protein_coding MGP_WSBEiJ_T0048835.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62014087 62039125 - MGP_WSBEiJ_P0048835 Piezo2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048836.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62026337 62036796 - Piezo2 protein_coding retained_intron MGP_WSBEiJ_T0048837.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62026784 62045500 - Piezo2 protein_coding retained_intron MGP_WSBEiJ_T0048838.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62072715 62418342 - MGP_WSBEiJ_P0048838 Piezo2 protein_coding protein_coding MGP_WSBEiJ_T0048839.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62092582 62162084 - MGP_WSBEiJ_P0048839 Piezo2 protein_coding protein_coding MGP_WSBEiJ_T0048840.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62123979 62201058 - MGP_WSBEiJ_P0048840 Piezo2 protein_coding protein_coding MGP_WSBEiJ_T0048841.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62124029 62419068 - MGP_WSBEiJ_P0048841 Piezo2 protein_coding protein_coding MGP_WSBEiJ_T0048842.1 MGP_WSBEiJ_G0023769.1 mouse_genomes_project 18 62138890 62419054 - Piezo2 protein_coding retained_intron MGP_WSBEiJ_T0017032.1 MGP_WSBEiJ_G0014782.1 mouse_genomes_project 18 35715674 35736181 + Gm38182 processed_transcript processed_transcript MGP_WSBEiJ_T0017033.1 MGP_WSBEiJ_G0014782.1 mouse_genomes_project 18 35715943 35736039 + Gm38182 processed_transcript processed_transcript MGP_WSBEiJ_T0017034.1 MGP_WSBEiJ_G0014782.1 mouse_genomes_project 18 35716154 35736360 + Gm38182 processed_transcript processed_transcript MGP_WSBEiJ_T0017035.1 MGP_WSBEiJ_G0014782.1 mouse_genomes_project 18 35716239 35736363 + Gm38182 processed_transcript processed_transcript MGP_WSBEiJ_T0017036.1 MGP_WSBEiJ_G0014782.1 mouse_genomes_project 18 35717087 35736361 + Gm38182 processed_transcript processed_transcript MGP_WSBEiJ_T0010113.1 MGP_WSBEiJ_G0008270.1 mouse_genomes_project 18 89080032 89080113 + Mir6359 miRNA miRNA MGP_WSBEiJ_T0097303.1 MGP_WSBEiJ_G0035978.1 mouse_genomes_project 18 2448596 2450866 - Gm26575 sense_intronic sense_intronic MGP_WSBEiJ_T0003741.1 MGP_WSBEiJ_G0003364.1 mouse_genomes_project 18 41050243 41053665 + 4933407I08Rik antisense antisense MGP_WSBEiJ_T0010069.1 MGP_WSBEiJ_G0008226.1 mouse_genomes_project 18 3359495 3359578 - Mir1893 miRNA miRNA MGP_WSBEiJ_T0012984.1 MGP_WSBEiJ_G0011114.1 mouse_genomes_project 18 3231669 3231978 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048280.1 MGP_WSBEiJ_G0023540.1 mouse_genomes_project 18 33560849 33572930 - MGP_WSBEiJ_P0048280 Ecscr protein_coding protein_coding MGP_WSBEiJ_T0048281.1 MGP_WSBEiJ_G0023540.1 mouse_genomes_project 18 33560849 33570475 - MGP_WSBEiJ_P0048281 Ecscr protein_coding protein_coding MGP_WSBEiJ_T0048282.1 MGP_WSBEiJ_G0023540.1 mouse_genomes_project 18 33561036 33565045 - MGP_WSBEiJ_P0048282 Ecscr protein_coding protein_coding MGP_WSBEiJ_T0048283.1 MGP_WSBEiJ_G0023540.1 mouse_genomes_project 18 33561523 33565045 - MGP_WSBEiJ_P0048283 Ecscr protein_coding protein_coding MGP_WSBEiJ_T0048284.1 MGP_WSBEiJ_G0023540.1 mouse_genomes_project 18 33565002 33565642 - Ecscr protein_coding processed_transcript MGP_WSBEiJ_T0048285.1 MGP_WSBEiJ_G0023540.1 mouse_genomes_project 18 33565269 33572867 - Ecscr protein_coding processed_transcript MGP_WSBEiJ_T0013023.1 MGP_WSBEiJ_G0011153.1 mouse_genomes_project 18 76880470 76881444 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048415.1 MGP_WSBEiJ_G0023609.1 mouse_genomes_project 18 35567993 35737854 + MGP_WSBEiJ_P0048415 Pcdhgb2 protein_coding protein_coding MGP_WSBEiJ_T0048416.1 MGP_WSBEiJ_G0023609.1 mouse_genomes_project 18 35568000 35571485 + Pcdhgb2 protein_coding retained_intron MGP_WSBEiJ_T0012987.1 MGP_WSBEiJ_G0011117.1 mouse_genomes_project 18 6605259 6606262 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010110.1 MGP_WSBEiJ_G0008267.1 mouse_genomes_project 18 75824411 75824512 + Mir6358 miRNA miRNA MGP_WSBEiJ_T0048392.1 MGP_WSBEiJ_G0023590.1 mouse_genomes_project 18 35295768 35299082 + MGP_WSBEiJ_P0048392 Pcdhb10 protein_coding protein_coding MGP_WSBEiJ_T0048233.1 MGP_WSBEiJ_G0023520.1 mouse_genomes_project 18 32510386 32530131 - MGP_WSBEiJ_P0048233 Cdc25c protein_coding protein_coding MGP_WSBEiJ_T0049124.1 MGP_WSBEiJ_G0023848.1 mouse_genomes_project 18 77340789 77425686 - MGP_WSBEiJ_P0049124 8030462N17Rik protein_coding protein_coding MGP_WSBEiJ_T0003717.1 MGP_WSBEiJ_G0003344.1 mouse_genomes_project 18 3359074 3365900 + Gm28529 antisense antisense MGP_WSBEiJ_T0003718.1 MGP_WSBEiJ_G0003344.1 mouse_genomes_project 18 3359086 3360056 + Gm28529 antisense antisense MGP_WSBEiJ_T0047958.1 MGP_WSBEiJ_G0023414.1 mouse_genomes_project 18 6581058 6581532 - MGP_WSBEiJ_P0047958 Gm17430 protein_coding protein_coding MGP_WSBEiJ_T0010087.1 MGP_WSBEiJ_G0008244.1 mouse_genomes_project 18 39422140 39422231 - Gm44476 miRNA miRNA MGP_WSBEiJ_T0003733.1 MGP_WSBEiJ_G0003356.1 mouse_genomes_project 18 35317636 35321940 - Gm37446 antisense antisense MGP_WSBEiJ_T0048911.1 MGP_WSBEiJ_G0023796.1 mouse_genomes_project 18 66774860 66789985 + MGP_WSBEiJ_P0048911 Slmo1 protein_coding protein_coding MGP_WSBEiJ_T0048935.1 MGP_WSBEiJ_G0023808.1 mouse_genomes_project 18 68347898 68354028 - MGP_WSBEiJ_P0048935 4930546C10Rik protein_coding protein_coding MGP_WSBEiJ_T0048612.1 MGP_WSBEiJ_G0023685.1 mouse_genomes_project 18 45050478 45107386 + MGP_WSBEiJ_P0048612 Lvrn protein_coding protein_coding MGP_WSBEiJ_T0048725.1 MGP_WSBEiJ_G0023728.1 mouse_genomes_project 18 59032461 59064814 + MGP_WSBEiJ_P0048725 Gm4951 protein_coding protein_coding MGP_WSBEiJ_T0097005.1 MGP_WSBEiJ_G0035686.1 mouse_genomes_project 18 36277345 36277442 + Gm24690 rRNA rRNA MGP_WSBEiJ_T0098027.1 MGP_WSBEiJ_G0036690.1 mouse_genomes_project 18 18206146 18206295 - Gm24959 snRNA snRNA MGP_WSBEiJ_T0000977.1 MGP_WSBEiJ_G0000912.1 mouse_genomes_project 18 53738946 53739158 + TEC TEC MGP_WSBEiJ_T0048049.1 MGP_WSBEiJ_G0023443.1 mouse_genomes_project 18 12553624 12571177 - MGP_WSBEiJ_P0048049 Aqp4 protein_coding protein_coding MGP_WSBEiJ_T0006902.1 MGP_WSBEiJ_G0005679.1 mouse_genomes_project 18 8852723 8872880 - Gm6277 lincRNA lincRNA MGP_WSBEiJ_T0047956.1 MGP_WSBEiJ_G0023412.1 mouse_genomes_project 18 6481061 6485048 - MGP_WSBEiJ_P0047956 Cetn1 protein_coding protein_coding MGP_WSBEiJ_T0003735.1 MGP_WSBEiJ_G0003358.1 mouse_genomes_project 18 35596345 35608169 - Gm37165 antisense antisense MGP_WSBEiJ_T0003729.1 MGP_WSBEiJ_G0003352.1 mouse_genomes_project 18 34841599 34842759 - Gm37751 antisense antisense MGP_WSBEiJ_T0048118.1 MGP_WSBEiJ_G0023471.1 mouse_genomes_project 18 21914471 21921355 + MGP_WSBEiJ_P0048118 2700062C07Rik protein_coding protein_coding MGP_WSBEiJ_T0048563.1 MGP_WSBEiJ_G0023660.1 mouse_genomes_project 18 41927344 41943896 - MGP_WSBEiJ_P0048563 Gm94 protein_coding protein_coding MGP_WSBEiJ_T0099284.1 MGP_WSBEiJ_G0037947.1 mouse_genomes_project 18 62569178 62569322 + Gm22210 snoRNA snoRNA MGP_WSBEiJ_T0003722.1 MGP_WSBEiJ_G0003348.1 mouse_genomes_project 18 13920957 13921903 + Gm15485 antisense antisense MGP_WSBEiJ_T0048738.1 MGP_WSBEiJ_G0023735.1 mouse_genomes_project 18 59450977 59467562 - MGP_WSBEiJ_P0048738 Myoz3 protein_coding protein_coding MGP_WSBEiJ_T0048178.1 MGP_WSBEiJ_G0023503.1 mouse_genomes_project 18 30665770 30901886 + MGP_WSBEiJ_P0048178 Camk4 protein_coding protein_coding MGP_WSBEiJ_T0048724.1 MGP_WSBEiJ_G0023727.1 mouse_genomes_project 18 57951292 58195149 + MGP_WSBEiJ_P0048724 Chsy3 protein_coding protein_coding MGP_WSBEiJ_T0013014.1 MGP_WSBEiJ_G0011144.1 mouse_genomes_project 18 48570316 48571061 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097004.1 MGP_WSBEiJ_G0035685.1 mouse_genomes_project 18 32413947 32414066 + n-R5s25 rRNA rRNA MGP_WSBEiJ_T0049221.1 MGP_WSBEiJ_G0023877.1 mouse_genomes_project 18 84667742 84685105 - MGP_WSBEiJ_P0049221 Cndp2 protein_coding protein_coding MGP_WSBEiJ_T0049222.1 MGP_WSBEiJ_G0023877.1 mouse_genomes_project 18 84667742 84681458 - MGP_WSBEiJ_P0049222 Cndp2 protein_coding protein_coding MGP_WSBEiJ_T0048713.1 MGP_WSBEiJ_G0023722.1 mouse_genomes_project 18 56744988 56959084 - MGP_WSBEiJ_P0048713 Fbn2 protein_coding protein_coding MGP_WSBEiJ_T0049223.1 MGP_WSBEiJ_G0023878.1 mouse_genomes_project 18 84725992 84736739 + MGP_WSBEiJ_P0049223 Fam69c protein_coding protein_coding MGP_WSBEiJ_T0049224.1 MGP_WSBEiJ_G0023878.1 mouse_genomes_project 18 84726215 84748462 + MGP_WSBEiJ_P0049224 Fam69c protein_coding protein_coding MGP_WSBEiJ_T0049225.1 MGP_WSBEiJ_G0023878.1 mouse_genomes_project 18 84726250 84747426 + Fam69c protein_coding processed_transcript MGP_WSBEiJ_T0049226.1 MGP_WSBEiJ_G0023878.1 mouse_genomes_project 18 84726856 84736516 + Fam69c protein_coding processed_transcript MGP_WSBEiJ_T0010102.1 MGP_WSBEiJ_G0008259.1 mouse_genomes_project 18 60588272 60588335 - Mir143 miRNA miRNA MGP_WSBEiJ_T0098030.1 MGP_WSBEiJ_G0036693.1 mouse_genomes_project 18 31757441 31757502 - Gm22788 snRNA snRNA MGP_WSBEiJ_T0048457.1 MGP_WSBEiJ_G0023627.1 mouse_genomes_project 18 35853041 35857344 + MGP_WSBEiJ_P0048457 Rell2 protein_coding protein_coding MGP_WSBEiJ_T0048458.1 MGP_WSBEiJ_G0023627.1 mouse_genomes_project 18 35853049 35856516 + MGP_WSBEiJ_P0048458 Rell2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048459.1 MGP_WSBEiJ_G0023627.1 mouse_genomes_project 18 35853109 35856516 + MGP_WSBEiJ_P0048459 Rell2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048460.1 MGP_WSBEiJ_G0023627.1 mouse_genomes_project 18 35853558 35855649 + MGP_WSBEiJ_P0048460 Rell2 protein_coding protein_coding MGP_WSBEiJ_T0048461.1 MGP_WSBEiJ_G0023627.1 mouse_genomes_project 18 35853594 35857134 + MGP_WSBEiJ_P0048461 Rell2 protein_coding protein_coding MGP_WSBEiJ_T0048462.1 MGP_WSBEiJ_G0023627.1 mouse_genomes_project 18 35854663 35856010 + Rell2 protein_coding retained_intron MGP_WSBEiJ_T0048463.1 MGP_WSBEiJ_G0023627.1 mouse_genomes_project 18 35854704 35856140 + Rell2 protein_coding retained_intron MGP_WSBEiJ_T0048936.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68771041 68997677 + MGP_WSBEiJ_P0048936 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048937.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68771831 69123895 + MGP_WSBEiJ_P0048937 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048938.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68772174 69128621 + MGP_WSBEiJ_P0048938 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048939.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68772177 69122927 + MGP_WSBEiJ_P0048939 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048940.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68772214 69122815 + MGP_WSBEiJ_P0048940 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048941.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773404 69122941 + MGP_WSBEiJ_P0048941 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048942.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773406 69124074 + MGP_WSBEiJ_P0048942 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048943.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773406 69127508 + MGP_WSBEiJ_P0048943 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048944.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773434 69122749 + MGP_WSBEiJ_P0048944 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048945.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773436 69073928 + MGP_WSBEiJ_P0048945 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048946.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773446 68921437 + Tcf4 protein_coding processed_transcript MGP_WSBEiJ_T0048947.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773524 69122749 + MGP_WSBEiJ_P0048947 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048948.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773845 69070750 + MGP_WSBEiJ_P0048948 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048949.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68773951 68998344 + MGP_WSBEiJ_P0048949 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048950.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68774035 69122776 + MGP_WSBEiJ_P0048950 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048951.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68774991 69122749 + MGP_WSBEiJ_P0048951 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048952.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68775037 68784966 + Tcf4 protein_coding processed_transcript MGP_WSBEiJ_T0048953.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68775937 68998238 + MGP_WSBEiJ_P0048953 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048954.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68775948 69122989 + MGP_WSBEiJ_P0048954 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048955.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68775950 68998245 + MGP_WSBEiJ_P0048955 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048956.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68776204 69123001 + MGP_WSBEiJ_P0048956 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048957.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68776263 69090622 + Tcf4 protein_coding processed_transcript MGP_WSBEiJ_T0048958.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68776617 69080012 + MGP_WSBEiJ_P0048958 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048959.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68848569 69122990 + MGP_WSBEiJ_P0048959 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048960.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68932989 69073976 + MGP_WSBEiJ_P0048960 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048961.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68934774 69122796 + MGP_WSBEiJ_P0048961 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048962.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68934913 69096624 + MGP_WSBEiJ_P0048962 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048963.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68935035 69090663 + MGP_WSBEiJ_P0048963 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048964.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68953251 69122805 + MGP_WSBEiJ_P0048964 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048965.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68953490 69080068 + MGP_WSBEiJ_P0048965 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048966.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68953538 69122749 + MGP_WSBEiJ_P0048966 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048967.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68953548 69122828 + MGP_WSBEiJ_P0048967 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048968.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68953593 69074013 + MGP_WSBEiJ_P0048968 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048969.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68954929 69080028 + MGP_WSBEiJ_P0048969 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048970.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68955042 69122673 + MGP_WSBEiJ_P0048970 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048971.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68955245 69096823 + MGP_WSBEiJ_P0048971 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048972.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68955268 68958098 + Tcf4 protein_coding retained_intron MGP_WSBEiJ_T0048973.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68955282 68998284 + Tcf4 protein_coding processed_transcript MGP_WSBEiJ_T0048974.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68955605 69122811 + MGP_WSBEiJ_P0048974 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048975.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68955743 69073975 + MGP_WSBEiJ_P0048975 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048976.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68955923 69070796 + Tcf4 protein_coding retained_intron MGP_WSBEiJ_T0048977.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68996600 69089418 + Tcf4 protein_coding processed_transcript MGP_WSBEiJ_T0048978.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 68996928 69074054 + Tcf4 protein_coding processed_transcript MGP_WSBEiJ_T0048979.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69027947 69122997 + MGP_WSBEiJ_P0048979 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048980.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69028316 69096771 + MGP_WSBEiJ_P0048980 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048981.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69028357 69115352 + MGP_WSBEiJ_P0048981 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048982.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69028363 69122304 + MGP_WSBEiJ_P0048982 Tcf4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048983.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69028370 69124076 + MGP_WSBEiJ_P0048983 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048984.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69028371 69070886 + Tcf4 protein_coding retained_intron MGP_WSBEiJ_T0048985.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69028371 69032385 + Tcf4 protein_coding retained_intron MGP_WSBEiJ_T0048986.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69028388 69096740 + Tcf4 protein_coding processed_transcript MGP_WSBEiJ_T0048987.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69028527 69089442 + MGP_WSBEiJ_P0048987 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048988.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69029127 69096638 + MGP_WSBEiJ_P0048988 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048989.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69034450 69090610 + MGP_WSBEiJ_P0048989 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048990.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69048577 69122749 + MGP_WSBEiJ_P0048990 Tcf4 protein_coding protein_coding MGP_WSBEiJ_T0048991.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69095543 69099164 + Tcf4 protein_coding retained_intron MGP_WSBEiJ_T0048992.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69119318 69124076 + Tcf4 protein_coding retained_intron MGP_WSBEiJ_T0048993.1 MGP_WSBEiJ_G0023809.1 mouse_genomes_project 18 69121960 69123185 + Tcf4 protein_coding retained_intron MGP_WSBEiJ_T0048076.1 MGP_WSBEiJ_G0023459.1 mouse_genomes_project 18 18926485 19038072 - MGP_WSBEiJ_P0048076 Klhl14 protein_coding protein_coding MGP_WSBEiJ_T0048077.1 MGP_WSBEiJ_G0023459.1 mouse_genomes_project 18 18926487 19040424 - MGP_WSBEiJ_P0048077 Klhl14 protein_coding protein_coding MGP_WSBEiJ_T0013016.1 MGP_WSBEiJ_G0011146.1 mouse_genomes_project 18 54355612 54356590 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012998.1 MGP_WSBEiJ_G0011128.1 mouse_genomes_project 18 28120120 28120495 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048529.1 MGP_WSBEiJ_G0023643.1 mouse_genomes_project 18 38261645 38552548 + MGP_WSBEiJ_P0048529 Kctd16 protein_coding protein_coding MGP_WSBEiJ_T0048068.1 MGP_WSBEiJ_G0023453.1 mouse_genomes_project 18 18019839 18083594 - MGP_WSBEiJ_P0048068 B4galt6 protein_coding protein_coding MGP_WSBEiJ_T0048307.1 MGP_WSBEiJ_G0023548.1 mouse_genomes_project 18 34305330 34360320 - MGP_WSBEiJ_P0048307 Pfdn1 protein_coding protein_coding MGP_WSBEiJ_T0011256.1 MGP_WSBEiJ_G0009413.1 mouse_genomes_project 18 38846483 38846788 - Gm22515 misc_RNA misc_RNA MGP_WSBEiJ_T0048852.1 MGP_WSBEiJ_G0023775.1 mouse_genomes_project 18 63573182 63589963 - MGP_WSBEiJ_P0048852 Nars protein_coding protein_coding MGP_WSBEiJ_T0010083.1 MGP_WSBEiJ_G0008240.1 mouse_genomes_project 18 34734732 34734842 + Gm23424 miRNA miRNA MGP_WSBEiJ_T0098034.1 MGP_WSBEiJ_G0036697.1 mouse_genomes_project 18 44655990 44656084 - Gm24076 snRNA snRNA MGP_WSBEiJ_T0003728.1 MGP_WSBEiJ_G0003351.1 mouse_genomes_project 18 21180964 21182811 - Gm15972 antisense antisense MGP_WSBEiJ_T0048240.1 MGP_WSBEiJ_G0023525.1 mouse_genomes_project 18 32696205 32725377 - MGP_WSBEiJ_P0048240 Etf1 protein_coding protein_coding MGP_WSBEiJ_T0048241.1 MGP_WSBEiJ_G0023525.1 mouse_genomes_project 18 32725203 32725311 - MGP_WSBEiJ_P0048241 Etf1 protein_coding protein_coding MGP_WSBEiJ_T0048176.1 MGP_WSBEiJ_G0023502.1 mouse_genomes_project 18 30561334 30592166 + MGP_WSBEiJ_P0048176 Wdr36 protein_coding protein_coding MGP_WSBEiJ_T0048177.1 MGP_WSBEiJ_G0023502.1 mouse_genomes_project 18 30561334 30592236 + MGP_WSBEiJ_P0048177 Wdr36 protein_coding protein_coding MGP_WSBEiJ_T0017025.1 MGP_WSBEiJ_G0014780.1 mouse_genomes_project 18 35052490 35072574 - Gm10544 processed_transcript antisense MGP_WSBEiJ_T0017026.1 MGP_WSBEiJ_G0014780.1 mouse_genomes_project 18 35069644 35072558 - Gm10544 processed_transcript antisense MGP_WSBEiJ_T0017027.1 MGP_WSBEiJ_G0014780.1 mouse_genomes_project 18 35070805 35072566 - Gm10544 processed_transcript retained_intron MGP_WSBEiJ_T0048823.1 MGP_WSBEiJ_G0023767.1 mouse_genomes_project 18 61922664 61953476 + MGP_WSBEiJ_P0048823 Apcdd1 protein_coding protein_coding MGP_WSBEiJ_T0048824.1 MGP_WSBEiJ_G0023767.1 mouse_genomes_project 18 61922666 61952745 + MGP_WSBEiJ_P0048824 Apcdd1 protein_coding protein_coding MGP_WSBEiJ_T0047953.1 MGP_WSBEiJ_G0023409.1 mouse_genomes_project 18 6083200 6086546 + MGP_WSBEiJ_P0047953 Fzd8 protein_coding protein_coding MGP_WSBEiJ_T0098040.1 MGP_WSBEiJ_G0036703.1 mouse_genomes_project 18 53777728 53777808 + Gm22597 snRNA snRNA MGP_WSBEiJ_T0048333.1 MGP_WSBEiJ_G0023554.1 mouse_genomes_project 18 34590557 34595676 + protein_coding processed_transcript MGP_WSBEiJ_T0048334.1 MGP_WSBEiJ_G0023554.1 mouse_genomes_project 18 34590566 34594997 + protein_coding processed_transcript MGP_WSBEiJ_T0006938.1 MGP_WSBEiJ_G0005705.1 mouse_genomes_project 18 62432555 62455179 + Gm26972 lincRNA lincRNA MGP_WSBEiJ_T0013002.1 MGP_WSBEiJ_G0011132.1 mouse_genomes_project 18 34826437 34828068 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013017.1 MGP_WSBEiJ_G0011147.1 mouse_genomes_project 18 54468576 54469554 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048845.1 MGP_WSBEiJ_G0023772.1 mouse_genomes_project 18 63306653 63330932 + MGP_WSBEiJ_P0048845 St8sia3 protein_coding protein_coding MGP_WSBEiJ_T0048846.1 MGP_WSBEiJ_G0023772.1 mouse_genomes_project 18 63319399 63324777 + MGP_WSBEiJ_P0048846 St8sia3 protein_coding protein_coding MGP_WSBEiJ_T0048847.1 MGP_WSBEiJ_G0023772.1 mouse_genomes_project 18 63319580 63324634 + St8sia3 protein_coding processed_transcript MGP_WSBEiJ_T0048848.1 MGP_WSBEiJ_G0023772.1 mouse_genomes_project 18 63320211 63324706 + St8sia3 protein_coding retained_intron MGP_WSBEiJ_T0010081.1 MGP_WSBEiJ_G0008238.1 mouse_genomes_project 18 33383433 33383544 + miRNA miRNA MGP_WSBEiJ_T0098035.1 MGP_WSBEiJ_G0036698.1 mouse_genomes_project 18 45101601 45101705 + Gm23610 snRNA snRNA MGP_WSBEiJ_T0048434.1 MGP_WSBEiJ_G0023622.1 mouse_genomes_project 18 35698272 35701652 + Pcdhgc3 protein_coding retained_intron MGP_WSBEiJ_T0048435.1 MGP_WSBEiJ_G0023622.1 mouse_genomes_project 18 35698318 35737854 + MGP_WSBEiJ_P0048435 Pcdhgc3 protein_coding protein_coding MGP_WSBEiJ_T0048436.1 MGP_WSBEiJ_G0023622.1 mouse_genomes_project 18 35698324 35737854 + MGP_WSBEiJ_P0048436 Pcdhgc3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010079.1 MGP_WSBEiJ_G0008236.1 mouse_genomes_project 18 30605889 30605990 - Mir6361 miRNA miRNA MGP_WSBEiJ_T0047990.1 MGP_WSBEiJ_G0023425.1 mouse_genomes_project 18 8872762 8983588 + MGP_WSBEiJ_P0047990 Cables1 protein_coding protein_coding MGP_WSBEiJ_T0047991.1 MGP_WSBEiJ_G0023425.1 mouse_genomes_project 18 8872816 8983594 + MGP_WSBEiJ_P0047991 Cables1 protein_coding protein_coding MGP_WSBEiJ_T0048417.1 MGP_WSBEiJ_G0023610.1 mouse_genomes_project 18 35573274 35737854 + MGP_WSBEiJ_P0048417 Pcdhga5 protein_coding protein_coding MGP_WSBEiJ_T0000979.1 MGP_WSBEiJ_G0000914.1 mouse_genomes_project 18 54111885 54112874 - TEC TEC MGP_WSBEiJ_T0049233.1 MGP_WSBEiJ_G0023881.1 mouse_genomes_project 18 84967530 84973236 - MGP_WSBEiJ_P0049233 Timm21 protein_coding protein_coding MGP_WSBEiJ_T0099262.1 MGP_WSBEiJ_G0037925.1 mouse_genomes_project 18 7437997 7438115 - Gm24894 snoRNA snoRNA MGP_WSBEiJ_T0048570.1 MGP_WSBEiJ_G0023665.1 mouse_genomes_project 18 42317988 42321440 - MGP_WSBEiJ_P0048570 Gm10267 protein_coding protein_coding MGP_WSBEiJ_T0048571.1 MGP_WSBEiJ_G0023665.1 mouse_genomes_project 18 42317997 42320890 - MGP_WSBEiJ_P0048571 Gm10267 protein_coding protein_coding MGP_WSBEiJ_T0048453.1 MGP_WSBEiJ_G0023626.1 mouse_genomes_project 18 35833824 35843578 - Hdac3 protein_coding retained_intron MGP_WSBEiJ_T0048454.1 MGP_WSBEiJ_G0023626.1 mouse_genomes_project 18 35834952 35842093 - Hdac3 protein_coding retained_intron MGP_WSBEiJ_T0048455.1 MGP_WSBEiJ_G0023626.1 mouse_genomes_project 18 35834952 35852959 - MGP_WSBEiJ_P0048455 Hdac3 protein_coding protein_coding MGP_WSBEiJ_T0048456.1 MGP_WSBEiJ_G0023626.1 mouse_genomes_project 18 35834958 35852902 - Hdac3 protein_coding processed_transcript MGP_WSBEiJ_T0049211.1 MGP_WSBEiJ_G0023874.1 mouse_genomes_project 18 84060324 84070616 + MGP_WSBEiJ_P0049211 Zadh2 protein_coding protein_coding MGP_WSBEiJ_T0006896.1 MGP_WSBEiJ_G0005674.1 mouse_genomes_project 18 1218142 1224454 - Gm26865 lincRNA lincRNA MGP_WSBEiJ_T0048368.1 MGP_WSBEiJ_G0023573.1 mouse_genomes_project 18 34885057 35081773 + MGP_WSBEiJ_P0048368 protein_coding protein_coding MGP_WSBEiJ_T0010074.1 MGP_WSBEiJ_G0008231.1 mouse_genomes_project 18 7683710 7683832 + Mir1b miRNA miRNA MGP_WSBEiJ_T0048398.1 MGP_WSBEiJ_G0023596.1 mouse_genomes_project 18 35365421 35370089 + MGP_WSBEiJ_P0048398 Pcdhb17 protein_coding protein_coding MGP_WSBEiJ_T0048391.1 MGP_WSBEiJ_G0023589.1 mouse_genomes_project 18 35286421 35289476 + MGP_WSBEiJ_P0048391 Pcdhb9 protein_coding protein_coding MGP_WSBEiJ_T0099285.1 MGP_WSBEiJ_G0037948.1 mouse_genomes_project 18 65779176 65779287 - Gm24679 snoRNA snoRNA MGP_WSBEiJ_T0048482.1 MGP_WSBEiJ_G0023632.1 mouse_genomes_project 18 36175877 36196829 - MGP_WSBEiJ_P0048482 Pcdh12 protein_coding protein_coding MGP_WSBEiJ_T0048483.1 MGP_WSBEiJ_G0023632.1 mouse_genomes_project 18 36178572 36190714 - Pcdh12 protein_coding retained_intron MGP_WSBEiJ_T0048484.1 MGP_WSBEiJ_G0023632.1 mouse_genomes_project 18 36193513 36197158 - Pcdh12 protein_coding retained_intron MGP_WSBEiJ_T0000971.1 MGP_WSBEiJ_G0000906.1 mouse_genomes_project 18 2439145 2442814 - TEC TEC MGP_WSBEiJ_T0003724.1 MGP_WSBEiJ_G0003350.1 mouse_genomes_project 18 19037151 19040854 + 4930426D05Rik antisense antisense MGP_WSBEiJ_T0003725.1 MGP_WSBEiJ_G0003350.1 mouse_genomes_project 18 19037268 19040847 + 4930426D05Rik antisense antisense MGP_WSBEiJ_T0003726.1 MGP_WSBEiJ_G0003350.1 mouse_genomes_project 18 19038263 19040863 + 4930426D05Rik antisense antisense MGP_WSBEiJ_T0003727.1 MGP_WSBEiJ_G0003350.1 mouse_genomes_project 18 19038266 19041811 + 4930426D05Rik antisense antisense MGP_WSBEiJ_T0048187.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 31968184 32063355 + MGP_WSBEiJ_P0048187 Apc protein_coding protein_coding MGP_WSBEiJ_T0048188.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 31968244 32072038 + MGP_WSBEiJ_P0048188 Apc protein_coding protein_coding MGP_WSBEiJ_T0048189.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 31968244 32068457 + MGP_WSBEiJ_P0048189 Apc protein_coding protein_coding MGP_WSBEiJ_T0048190.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 31968273 32048587 + Apc protein_coding retained_intron MGP_WSBEiJ_T0048191.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 31968512 32023746 + MGP_WSBEiJ_P0048191 Apc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048192.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 31994498 32010477 + Apc protein_coding retained_intron MGP_WSBEiJ_T0048193.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 31994502 32038828 + MGP_WSBEiJ_P0048193 Apc protein_coding protein_coding MGP_WSBEiJ_T0048194.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 32048350 32064175 + MGP_WSBEiJ_P0048194 Apc protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048195.1 MGP_WSBEiJ_G0023508.1 mouse_genomes_project 18 32049645 32060586 + Apc protein_coding processed_transcript MGP_WSBEiJ_T0011261.1 MGP_WSBEiJ_G0009418.1 mouse_genomes_project 18 54620652 54620958 - Gm22484 misc_RNA misc_RNA MGP_WSBEiJ_T0048186.1 MGP_WSBEiJ_G0023507.1 mouse_genomes_project 18 31517953 31737799 - MGP_WSBEiJ_P0048186 Epb41l4a protein_coding protein_coding MGP_WSBEiJ_T0000980.1 MGP_WSBEiJ_G0000915.1 mouse_genomes_project 18 60893874 60894119 - TEC TEC MGP_WSBEiJ_T0048166.1 MGP_WSBEiJ_G0023497.1 mouse_genomes_project 18 29866408 29943301 + MGP_WSBEiJ_P0048166 Map3k2 protein_coding protein_coding MGP_WSBEiJ_T0099268.1 MGP_WSBEiJ_G0037931.1 mouse_genomes_project 18 25893279 25893411 + Gm24246 snoRNA snoRNA MGP_WSBEiJ_T0048780.1 MGP_WSBEiJ_G0023747.1 mouse_genomes_project 18 60034757 60081601 - MGP_WSBEiJ_P0048780 Hmgxb3 protein_coding protein_coding MGP_WSBEiJ_T0048175.1 MGP_WSBEiJ_G0023501.1 mouse_genomes_project 18 30539720 30544101 + MGP_WSBEiJ_P0048175 Tslp protein_coding protein_coding MGP_WSBEiJ_T0048437.1 MGP_WSBEiJ_G0023623.1 mouse_genomes_project 18 35706880 35737854 + MGP_WSBEiJ_P0048437 Pcdhga8 protein_coding protein_coding MGP_WSBEiJ_T0048438.1 MGP_WSBEiJ_G0023623.1 mouse_genomes_project 18 35707202 35737854 + MGP_WSBEiJ_P0048438 Pcdhga8 protein_coding protein_coding MGP_WSBEiJ_T0048439.1 MGP_WSBEiJ_G0023623.1 mouse_genomes_project 18 35707257 35710357 + Pcdhga8 protein_coding retained_intron MGP_WSBEiJ_T0048004.1 MGP_WSBEiJ_G0023429.1 mouse_genomes_project 18 9241380 9288133 - MGP_WSBEiJ_P0048004 Npc1 protein_coding protein_coding MGP_WSBEiJ_T0048005.1 MGP_WSBEiJ_G0023429.1 mouse_genomes_project 18 9261986 9264158 - Npc1 protein_coding processed_transcript MGP_WSBEiJ_T0048006.1 MGP_WSBEiJ_G0023429.1 mouse_genomes_project 18 9269232 9288091 - Npc1 protein_coding retained_intron MGP_WSBEiJ_T0048007.1 MGP_WSBEiJ_G0023429.1 mouse_genomes_project 18 9269653 9288059 - Npc1 protein_coding retained_intron MGP_WSBEiJ_T0048008.1 MGP_WSBEiJ_G0023429.1 mouse_genomes_project 18 9273486 9275732 - Npc1 protein_coding processed_transcript MGP_WSBEiJ_T0048119.1 MGP_WSBEiJ_G0023472.1 mouse_genomes_project 18 21927734 21976901 - MGP_WSBEiJ_P0048119 Rprd1a protein_coding protein_coding MGP_WSBEiJ_T0006927.1 MGP_WSBEiJ_G0005698.1 mouse_genomes_project 18 52970254 53004593 + Redrum lincRNA lincRNA MGP_WSBEiJ_T0098050.1 MGP_WSBEiJ_G0036713.1 mouse_genomes_project 18 66431367 66431460 - Gm23512 snRNA snRNA MGP_WSBEiJ_T0048579.1 MGP_WSBEiJ_G0023671.1 mouse_genomes_project 18 42545998 42561585 + MGP_WSBEiJ_P0048579 Dcp2 protein_coding protein_coding MGP_WSBEiJ_T0048580.1 MGP_WSBEiJ_G0023671.1 mouse_genomes_project 18 42546023 42589816 + MGP_WSBEiJ_P0048580 Dcp2 protein_coding protein_coding MGP_WSBEiJ_T0048569.1 MGP_WSBEiJ_G0023664.1 mouse_genomes_project 18 42263275 42267412 + MGP_WSBEiJ_P0048569 Spink12 protein_coding protein_coding MGP_WSBEiJ_T0049024.1 MGP_WSBEiJ_G0023819.1 mouse_genomes_project 18 73174906 73235191 - MGP_WSBEiJ_P0049024 Smad4 protein_coding protein_coding MGP_WSBEiJ_T0049025.1 MGP_WSBEiJ_G0023819.1 mouse_genomes_project 18 73175897 73214734 - MGP_WSBEiJ_P0049025 Smad4 protein_coding protein_coding MGP_WSBEiJ_T0049026.1 MGP_WSBEiJ_G0023819.1 mouse_genomes_project 18 73176054 73178460 - Smad4 protein_coding processed_transcript MGP_WSBEiJ_T0049027.1 MGP_WSBEiJ_G0023819.1 mouse_genomes_project 18 73176108 73185715 - Smad4 protein_coding processed_transcript MGP_WSBEiJ_T0049028.1 MGP_WSBEiJ_G0023819.1 mouse_genomes_project 18 73176119 73198555 - Smad4 protein_coding processed_transcript MGP_WSBEiJ_T0049029.1 MGP_WSBEiJ_G0023819.1 mouse_genomes_project 18 73194558 73211621 - Smad4 protein_coding processed_transcript MGP_WSBEiJ_T0048576.1 MGP_WSBEiJ_G0023669.1 mouse_genomes_project 18 42433541 42442993 + MGP_WSBEiJ_P0048576 Npy6r protein_coding protein_coding MGP_WSBEiJ_T0048739.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59469746 59499999 - MGP_WSBEiJ_P0048739 Synpo protein_coding protein_coding MGP_WSBEiJ_T0048740.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59469755 59500236 - MGP_WSBEiJ_P0048740 Synpo protein_coding protein_coding MGP_WSBEiJ_T0048741.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59469763 59505580 - MGP_WSBEiJ_P0048741 Synpo protein_coding protein_coding MGP_WSBEiJ_T0048742.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59469764 59476233 - Synpo protein_coding processed_transcript MGP_WSBEiJ_T0048743.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59475941 59499899 - MGP_WSBEiJ_P0048743 Synpo protein_coding protein_coding MGP_WSBEiJ_T0048744.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59475942 59485827 - MGP_WSBEiJ_P0048744 Synpo protein_coding protein_coding MGP_WSBEiJ_T0048745.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59475944 59525235 - MGP_WSBEiJ_P0048745 Synpo protein_coding protein_coding MGP_WSBEiJ_T0048746.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59479844 59498988 - MGP_WSBEiJ_P0048746 Synpo protein_coding protein_coding MGP_WSBEiJ_T0048747.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59479995 59499925 - Synpo protein_coding processed_transcript MGP_WSBEiJ_T0048748.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59481617 59537050 - Synpo protein_coding processed_transcript MGP_WSBEiJ_T0048749.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59505224 59525188 - Synpo protein_coding processed_transcript MGP_WSBEiJ_T0048750.1 MGP_WSBEiJ_G0023736.1 mouse_genomes_project 18 59522550 59525188 - Synpo protein_coding processed_transcript MGP_WSBEiJ_T0048128.1 MGP_WSBEiJ_G0023478.1 mouse_genomes_project 18 22594808 22637882 - MGP_WSBEiJ_P0048128 Tpgs2 protein_coding protein_coding MGP_WSBEiJ_T0048129.1 MGP_WSBEiJ_G0023478.1 mouse_genomes_project 18 22603545 22638195 - MGP_WSBEiJ_P0048129 Tpgs2 protein_coding protein_coding MGP_WSBEiJ_T0049200.1 MGP_WSBEiJ_G0023871.1 mouse_genomes_project 18 82505741 82612346 - MGP_WSBEiJ_P0049200 Zfp236 protein_coding protein_coding MGP_WSBEiJ_T0049201.1 MGP_WSBEiJ_G0023871.1 mouse_genomes_project 18 82505743 82601440 - MGP_WSBEiJ_P0049201 Zfp236 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049202.1 MGP_WSBEiJ_G0023871.1 mouse_genomes_project 18 82507622 82531197 - MGP_WSBEiJ_P0049202 Zfp236 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049203.1 MGP_WSBEiJ_G0023871.1 mouse_genomes_project 18 82509301 82610610 - MGP_WSBEiJ_P0049203 Zfp236 protein_coding protein_coding MGP_WSBEiJ_T0049204.1 MGP_WSBEiJ_G0023871.1 mouse_genomes_project 18 82509301 82610610 - MGP_WSBEiJ_P0049204 Zfp236 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049205.1 MGP_WSBEiJ_G0023871.1 mouse_genomes_project 18 82553247 82554429 - Zfp236 protein_coding retained_intron MGP_WSBEiJ_T0049206.1 MGP_WSBEiJ_G0023871.1 mouse_genomes_project 18 82598702 82609667 - MGP_WSBEiJ_P0049206 Zfp236 protein_coding protein_coding MGP_WSBEiJ_T0048063.1 MGP_WSBEiJ_G0023450.1 mouse_genomes_project 18 17842984 17875778 + MGP_WSBEiJ_P0048063 Dsg3 protein_coding protein_coding MGP_WSBEiJ_T0048013.1 MGP_WSBEiJ_G0023431.1 mouse_genomes_project 18 9386240 9646423 + MGP_WSBEiJ_P0048013 Lama3 protein_coding protein_coding MGP_WSBEiJ_T0048014.1 MGP_WSBEiJ_G0023431.1 mouse_genomes_project 18 9386445 9646073 + MGP_WSBEiJ_P0048014 Lama3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048015.1 MGP_WSBEiJ_G0023431.1 mouse_genomes_project 18 9564560 9646423 + MGP_WSBEiJ_P0048015 Lama3 protein_coding protein_coding MGP_WSBEiJ_T0048354.1 MGP_WSBEiJ_G0023565.1 mouse_genomes_project 18 34837836 35081777 + MGP_WSBEiJ_P0048354 Pcdha1 protein_coding protein_coding MGP_WSBEiJ_T0048355.1 MGP_WSBEiJ_G0023565.1 mouse_genomes_project 18 34837937 35081773 + MGP_WSBEiJ_P0048355 Pcdha1 protein_coding protein_coding MGP_WSBEiJ_T0048575.1 MGP_WSBEiJ_G0023668.1 mouse_genomes_project 18 42362268 42367929 + MGP_WSBEiJ_P0048575 Gm10542 protein_coding protein_coding MGP_WSBEiJ_T0010080.1 MGP_WSBEiJ_G0008237.1 mouse_genomes_project 18 33380868 33380938 + Mir1949 miRNA miRNA MGP_WSBEiJ_T0048493.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36540028 36585920 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048494.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36540097 36740885 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048495.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36567333 36582924 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048496.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36619955 36727811 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048497.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36619955 37073913 + MGP_WSBEiJ_P0048497 Arhgap26 protein_coding protein_coding MGP_WSBEiJ_T0048505.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36849946 36931373 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048506.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36850131 36891552 + MGP_WSBEiJ_P0048506 Arhgap26 protein_coding protein_coding MGP_WSBEiJ_T0048507.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36912811 36931036 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048508.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36953581 37063526 + Arhgap26 protein_coding retained_intron MGP_WSBEiJ_T0048509.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36953581 37349463 + MGP_WSBEiJ_P0048509 Arhgap26 protein_coding protein_coding MGP_WSBEiJ_T0048510.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 36953912 37344375 + MGP_WSBEiJ_P0048510 Arhgap26 protein_coding protein_coding MGP_WSBEiJ_T0048511.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 37062687 37090497 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048512.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 37193361 37345729 + MGP_WSBEiJ_P0048512 Arhgap26 protein_coding protein_coding MGP_WSBEiJ_T0048513.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 37254872 37349463 + MGP_WSBEiJ_P0048513 Arhgap26 protein_coding protein_coding MGP_WSBEiJ_T0048514.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 37259660 37275595 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048515.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 37265004 37344342 + MGP_WSBEiJ_P0048515 Arhgap26 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048516.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 37265004 37332980 + MGP_WSBEiJ_P0048516 Arhgap26 protein_coding protein_coding MGP_WSBEiJ_T0048517.1 MGP_WSBEiJ_G0023637.1 mouse_genomes_project 18 37335790 37340272 + Arhgap26 protein_coding processed_transcript MGP_WSBEiJ_T0048825.1 MGP_WSBEiJ_G0023768.1 mouse_genomes_project 18 61979008 62001204 + MGP_WSBEiJ_P0048825 Napg protein_coding protein_coding MGP_WSBEiJ_T0048826.1 MGP_WSBEiJ_G0023768.1 mouse_genomes_project 18 61979033 61981826 + Napg protein_coding retained_intron MGP_WSBEiJ_T0048827.1 MGP_WSBEiJ_G0023768.1 mouse_genomes_project 18 61979073 61998686 + MGP_WSBEiJ_P0048827 Napg protein_coding protein_coding MGP_WSBEiJ_T0048828.1 MGP_WSBEiJ_G0023768.1 mouse_genomes_project 18 61979094 61983958 + Napg protein_coding retained_intron MGP_WSBEiJ_T0048829.1 MGP_WSBEiJ_G0023768.1 mouse_genomes_project 18 61981410 61984186 + Napg protein_coding retained_intron MGP_WSBEiJ_T0048830.1 MGP_WSBEiJ_G0023768.1 mouse_genomes_project 18 61987128 61993004 + Napg protein_coding processed_transcript MGP_WSBEiJ_T0048831.1 MGP_WSBEiJ_G0023768.1 mouse_genomes_project 18 61987211 61996330 + Napg protein_coding retained_intron MGP_WSBEiJ_T0048832.1 MGP_WSBEiJ_G0023768.1 mouse_genomes_project 18 61989383 61996786 + Napg protein_coding processed_transcript MGP_WSBEiJ_T0048537.1 MGP_WSBEiJ_G0023648.1 mouse_genomes_project 18 40256114 40271731 - MGP_WSBEiJ_P0048537 Plac8l1 protein_coding protein_coding MGP_WSBEiJ_T0010082.1 MGP_WSBEiJ_G0008239.1 mouse_genomes_project 18 33819307 33819391 + Gm23882 miRNA miRNA MGP_WSBEiJ_T0003738.1 MGP_WSBEiJ_G0003361.1 mouse_genomes_project 18 36954071 36954629 - Gm15334 antisense antisense MGP_WSBEiJ_T0048809.1 MGP_WSBEiJ_G0023757.1 mouse_genomes_project 18 60752771 60869902 - MGP_WSBEiJ_P0048809 Ablim3 protein_coding protein_coding MGP_WSBEiJ_T0048810.1 MGP_WSBEiJ_G0023757.1 mouse_genomes_project 18 60752771 60869930 - MGP_WSBEiJ_P0048810 Ablim3 protein_coding protein_coding MGP_WSBEiJ_T0099261.1 MGP_WSBEiJ_G0037924.1 mouse_genomes_project 18 6479851 6479979 + Gm22765 snoRNA snoRNA MGP_WSBEiJ_T0048396.1 MGP_WSBEiJ_G0023594.1 mouse_genomes_project 18 35354143 35356944 + MGP_WSBEiJ_P0048396 Pcdhb15 protein_coding protein_coding MGP_WSBEiJ_T0013012.1 MGP_WSBEiJ_G0011142.1 mouse_genomes_project 18 44647468 44648044 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048897.1 MGP_WSBEiJ_G0023787.1 mouse_genomes_project 18 65217804 65479314 - Ccbe1 protein_coding processed_transcript MGP_WSBEiJ_T0048898.1 MGP_WSBEiJ_G0023787.1 mouse_genomes_project 18 65230230 65479656 - MGP_WSBEiJ_P0048898 Ccbe1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048899.1 MGP_WSBEiJ_G0023787.1 mouse_genomes_project 18 65234337 65479706 - MGP_WSBEiJ_P0048899 Ccbe1 protein_coding protein_coding MGP_WSBEiJ_T0048900.1 MGP_WSBEiJ_G0023787.1 mouse_genomes_project 18 65453419 65490632 - Ccbe1 protein_coding processed_transcript MGP_WSBEiJ_T0048145.1 MGP_WSBEiJ_G0023482.1 mouse_genomes_project 18 28613345 28971185 - MGP_WSBEiJ_P0048145 Rit2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048146.1 MGP_WSBEiJ_G0023482.1 mouse_genomes_project 18 28614171 28971028 - MGP_WSBEiJ_P0048146 Rit2 protein_coding protein_coding MGP_WSBEiJ_T0048147.1 MGP_WSBEiJ_G0023482.1 mouse_genomes_project 18 28806066 28867227 - Rit2 protein_coding processed_transcript MGP_WSBEiJ_T0048148.1 MGP_WSBEiJ_G0023482.1 mouse_genomes_project 18 28860073 28971006 - MGP_WSBEiJ_P0048148 Rit2 protein_coding protein_coding MGP_WSBEiJ_T0006897.1 MGP_WSBEiJ_G0005675.1 mouse_genomes_project 18 1648943 1689188 + lincRNA lincRNA MGP_WSBEiJ_T0006912.1 MGP_WSBEiJ_G0005687.1 mouse_genomes_project 18 30394423 30561397 - 4930455D15Rik lincRNA lincRNA MGP_WSBEiJ_T0048876.1 MGP_WSBEiJ_G0023781.1 mouse_genomes_project 18 64846300 64897665 + MGP_WSBEiJ_P0048876 Oacyl protein_coding protein_coding MGP_WSBEiJ_T0048877.1 MGP_WSBEiJ_G0023781.1 mouse_genomes_project 18 64846302 64897729 + MGP_WSBEiJ_P0048877 Oacyl protein_coding protein_coding MGP_WSBEiJ_T0048878.1 MGP_WSBEiJ_G0023781.1 mouse_genomes_project 18 64895148 64896520 + Oacyl protein_coding processed_transcript MGP_WSBEiJ_T0048728.1 MGP_WSBEiJ_G0023731.1 mouse_genomes_project 18 59228082 59246346 + MGP_WSBEiJ_P0048728 Iigp1 protein_coding protein_coding MGP_WSBEiJ_T0048729.1 MGP_WSBEiJ_G0023731.1 mouse_genomes_project 18 59228082 59246346 + MGP_WSBEiJ_P0048729 Iigp1 protein_coding protein_coding MGP_WSBEiJ_T0049031.1 MGP_WSBEiJ_G0023821.1 mouse_genomes_project 18 73319895 73365356 - MGP_WSBEiJ_P0049031 Me2 protein_coding protein_coding MGP_WSBEiJ_T0048025.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9826013 9901435 - MGP_WSBEiJ_P0048025 Osbpl1a protein_coding protein_coding MGP_WSBEiJ_T0048026.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9826867 9966127 - MGP_WSBEiJ_P0048026 Osbpl1a protein_coding protein_coding MGP_WSBEiJ_T0048027.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9826880 10030068 - MGP_WSBEiJ_P0048027 Osbpl1a protein_coding protein_coding MGP_WSBEiJ_T0048028.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9833183 9837784 - Osbpl1a protein_coding retained_intron MGP_WSBEiJ_T0048029.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9837449 9949525 - MGP_WSBEiJ_P0048029 Osbpl1a protein_coding protein_coding MGP_WSBEiJ_T0048030.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9839112 9975292 - Osbpl1a protein_coding retained_intron MGP_WSBEiJ_T0048031.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9841947 9955337 - MGP_WSBEiJ_P0048031 Osbpl1a protein_coding protein_coding MGP_WSBEiJ_T0048032.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9956443 10030142 - Osbpl1a protein_coding retained_intron MGP_WSBEiJ_T0048033.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9984120 10030078 - MGP_WSBEiJ_P0048033 Osbpl1a protein_coding protein_coding MGP_WSBEiJ_T0048034.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 9994865 10030107 - MGP_WSBEiJ_P0048034 Osbpl1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048035.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 10015653 10030093 - Osbpl1a protein_coding retained_intron MGP_WSBEiJ_T0048036.1 MGP_WSBEiJ_G0023434.1 mouse_genomes_project 18 10021184 10030090 - Osbpl1a protein_coding processed_transcript MGP_WSBEiJ_T0048647.1 MGP_WSBEiJ_G0023692.1 mouse_genomes_project 18 48463840 48544391 + MGP_WSBEiJ_P0048647 Hsd17b4 protein_coding protein_coding MGP_WSBEiJ_T0048648.1 MGP_WSBEiJ_G0023692.1 mouse_genomes_project 18 48464133 48477931 + Hsd17b4 protein_coding processed_transcript MGP_WSBEiJ_T0048649.1 MGP_WSBEiJ_G0023692.1 mouse_genomes_project 18 48477687 48482387 + Hsd17b4 protein_coding retained_intron MGP_WSBEiJ_T0048650.1 MGP_WSBEiJ_G0023692.1 mouse_genomes_project 18 48539452 48544094 + Hsd17b4 protein_coding retained_intron MGP_WSBEiJ_T0048301.1 MGP_WSBEiJ_G0023546.1 mouse_genomes_project 18 34178885 34199336 + MGP_WSBEiJ_P0048301 Pura protein_coding protein_coding MGP_WSBEiJ_T0003721.1 MGP_WSBEiJ_G0003347.1 mouse_genomes_project 18 9561546 9564788 - Gm29200 antisense antisense MGP_WSBEiJ_T0048851.1 MGP_WSBEiJ_G0023774.1 mouse_genomes_project 18 63527212 63561633 - MGP_WSBEiJ_P0048851 Fech protein_coding protein_coding MGP_WSBEiJ_T0048309.1 MGP_WSBEiJ_G0023550.1 mouse_genomes_project 18 34432049 34445173 + MGP_WSBEiJ_P0048309 Slc4a9 protein_coding protein_coding MGP_WSBEiJ_T0048310.1 MGP_WSBEiJ_G0023550.1 mouse_genomes_project 18 34432049 34445173 + MGP_WSBEiJ_P0048310 Slc4a9 protein_coding protein_coding MGP_WSBEiJ_T0048311.1 MGP_WSBEiJ_G0023550.1 mouse_genomes_project 18 34432079 34450444 + MGP_WSBEiJ_P0048311 Slc4a9 protein_coding unknown_likely_coding MGP_WSBEiJ_T0096803.1 MGP_WSBEiJ_G0035484.1 mouse_genomes_project 18 89413616 89419127 - pseudogene pseudogene MGP_WSBEiJ_T0047982.1 MGP_WSBEiJ_G0023422.1 mouse_genomes_project 18 7621259 7716836 + MGP_WSBEiJ_P0047982 Mib1 protein_coding protein_coding MGP_WSBEiJ_T0047983.1 MGP_WSBEiJ_G0023422.1 mouse_genomes_project 18 7621366 7710432 + MGP_WSBEiJ_P0047983 Mib1 protein_coding protein_coding MGP_WSBEiJ_T0047984.1 MGP_WSBEiJ_G0023422.1 mouse_genomes_project 18 7621455 7651809 + Mib1 protein_coding retained_intron MGP_WSBEiJ_T0047985.1 MGP_WSBEiJ_G0023422.1 mouse_genomes_project 18 7657415 7716962 + MGP_WSBEiJ_P0047985 Mib1 protein_coding protein_coding MGP_WSBEiJ_T0047986.1 MGP_WSBEiJ_G0023422.1 mouse_genomes_project 18 7696622 7715886 + MGP_WSBEiJ_P0047986 Mib1 protein_coding protein_coding MGP_WSBEiJ_T0011269.1 MGP_WSBEiJ_G0009426.1 mouse_genomes_project 18 84834767 84835066 + Gm22819 misc_RNA misc_RNA MGP_WSBEiJ_T0048909.1 MGP_WSBEiJ_G0023794.1 mouse_genomes_project 18 66694844 66706578 + MGP_WSBEiJ_P0048909 Tubb6 protein_coding protein_coding MGP_WSBEiJ_T0048706.1 MGP_WSBEiJ_G0023718.1 mouse_genomes_project 18 56067219 56107299 + MGP_WSBEiJ_P0048706 Prrc1 protein_coding protein_coding MGP_WSBEiJ_T0006918.1 MGP_WSBEiJ_G0005691.1 mouse_genomes_project 18 32581053 32587582 - Gm26538 lincRNA lincRNA MGP_WSBEiJ_T0049141.1 MGP_WSBEiJ_G0023858.1 mouse_genomes_project 18 79895166 79920297 - MGP_WSBEiJ_P0049141 Adnp2 protein_coding protein_coding MGP_WSBEiJ_T0049044.1 MGP_WSBEiJ_G0023826.1 mouse_genomes_project 18 73780074 73785423 + MGP_WSBEiJ_P0049044 Cxxc1 protein_coding protein_coding MGP_WSBEiJ_T0013010.1 MGP_WSBEiJ_G0011140.1 mouse_genomes_project 18 40330818 40331256 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0003744.1 MGP_WSBEiJ_G0003366.1 mouse_genomes_project 18 43849076 44059325 - antisense antisense MGP_WSBEiJ_T0003745.1 MGP_WSBEiJ_G0003366.1 mouse_genomes_project 18 43850719 44023836 - antisense antisense MGP_WSBEiJ_T0048560.1 MGP_WSBEiJ_G0023659.1 mouse_genomes_project 18 41913393 41916505 + MGP_WSBEiJ_P0048560 Scgb3a2 protein_coding protein_coding MGP_WSBEiJ_T0048561.1 MGP_WSBEiJ_G0023659.1 mouse_genomes_project 18 41913431 41916505 + MGP_WSBEiJ_P0048561 Scgb3a2 protein_coding protein_coding MGP_WSBEiJ_T0048562.1 MGP_WSBEiJ_G0023659.1 mouse_genomes_project 18 41913431 41916505 + MGP_WSBEiJ_P0048562 Scgb3a2 protein_coding protein_coding MGP_WSBEiJ_T0048498.1 MGP_WSBEiJ_G0023638.1 mouse_genomes_project 18 36793398 36876275 - MGP_WSBEiJ_P0048498 Fgf1 protein_coding protein_coding MGP_WSBEiJ_T0048499.1 MGP_WSBEiJ_G0023638.1 mouse_genomes_project 18 36793400 36886864 - MGP_WSBEiJ_P0048499 Fgf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048500.1 MGP_WSBEiJ_G0023638.1 mouse_genomes_project 18 36794902 36823267 - MGP_WSBEiJ_P0048500 Fgf1 protein_coding protein_coding MGP_WSBEiJ_T0048501.1 MGP_WSBEiJ_G0023638.1 mouse_genomes_project 18 36796632 36815267 - MGP_WSBEiJ_P0048501 Fgf1 protein_coding protein_coding MGP_WSBEiJ_T0048502.1 MGP_WSBEiJ_G0023638.1 mouse_genomes_project 18 36802882 36822652 - MGP_WSBEiJ_P0048502 Fgf1 protein_coding protein_coding MGP_WSBEiJ_T0048503.1 MGP_WSBEiJ_G0023638.1 mouse_genomes_project 18 36802923 36815380 - Fgf1 protein_coding retained_intron MGP_WSBEiJ_T0048504.1 MGP_WSBEiJ_G0023638.1 mouse_genomes_project 18 36815086 36886615 - MGP_WSBEiJ_P0048504 Fgf1 protein_coding protein_coding MGP_WSBEiJ_T0048542.1 MGP_WSBEiJ_G0023652.1 mouse_genomes_project 18 40605344 40678104 + MGP_WSBEiJ_P0048542 Tcerg1 protein_coding protein_coding MGP_WSBEiJ_T0048543.1 MGP_WSBEiJ_G0023652.1 mouse_genomes_project 18 40605357 40677397 + MGP_WSBEiJ_P0048543 Tcerg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048903.1 MGP_WSBEiJ_G0023790.1 mouse_genomes_project 18 66340268 66484905 + MGP_WSBEiJ_P0048903 Gnal protein_coding protein_coding MGP_WSBEiJ_T0048904.1 MGP_WSBEiJ_G0023790.1 mouse_genomes_project 18 66388214 66484905 + MGP_WSBEiJ_P0048904 Gnal protein_coding protein_coding MGP_WSBEiJ_T0012997.1 MGP_WSBEiJ_G0011127.1 mouse_genomes_project 18 28085760 28087224 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048676.1 MGP_WSBEiJ_G0023707.1 mouse_genomes_project 18 52207158 52270772 - MGP_WSBEiJ_P0048676 Cep120 protein_coding protein_coding MGP_WSBEiJ_T0048401.1 MGP_WSBEiJ_G0023599.1 mouse_genomes_project 18 35384945 35388503 + MGP_WSBEiJ_P0048401 Pcdhb20 protein_coding protein_coding MGP_WSBEiJ_T0048207.1 MGP_WSBEiJ_G0023514.1 mouse_genomes_project 18 32324909 32340924 - MGP_WSBEiJ_P0048207 Nme5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048208.1 MGP_WSBEiJ_G0023514.1 mouse_genomes_project 18 32324911 32340939 - MGP_WSBEiJ_P0048208 Nme5 protein_coding protein_coding MGP_WSBEiJ_T0048209.1 MGP_WSBEiJ_G0023514.1 mouse_genomes_project 18 32324959 32340911 - MGP_WSBEiJ_P0048209 Nme5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048210.1 MGP_WSBEiJ_G0023514.1 mouse_genomes_project 18 32329123 32340907 - MGP_WSBEiJ_P0048210 Nme5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048915.1 MGP_WSBEiJ_G0023800.1 mouse_genomes_project 18 66986994 67050229 - MGP_WSBEiJ_P0048915 Ptpn2 protein_coding protein_coding MGP_WSBEiJ_T0048916.1 MGP_WSBEiJ_G0023800.1 mouse_genomes_project 18 66986995 67050244 - MGP_WSBEiJ_P0048916 Ptpn2 protein_coding protein_coding MGP_WSBEiJ_T0048917.1 MGP_WSBEiJ_G0023800.1 mouse_genomes_project 18 66992701 67050251 - MGP_WSBEiJ_P0048917 Ptpn2 protein_coding protein_coding MGP_WSBEiJ_T0048918.1 MGP_WSBEiJ_G0023800.1 mouse_genomes_project 18 66998243 67014310 - Ptpn2 protein_coding processed_transcript MGP_WSBEiJ_T0048572.1 MGP_WSBEiJ_G0023666.1 mouse_genomes_project 18 42327925 42338851 - MGP_WSBEiJ_P0048572 Spinkl protein_coding protein_coding MGP_WSBEiJ_T0048237.1 MGP_WSBEiJ_G0023523.1 mouse_genomes_project 18 32626563 32633436 + MGP_WSBEiJ_P0048237 Reep2 protein_coding protein_coding MGP_WSBEiJ_T0048050.1 MGP_WSBEiJ_G0023444.1 mouse_genomes_project 18 12621680 12876553 - MGP_WSBEiJ_P0048050 Chst9 protein_coding protein_coding MGP_WSBEiJ_T0048051.1 MGP_WSBEiJ_G0023444.1 mouse_genomes_project 18 12621680 12911934 - MGP_WSBEiJ_P0048051 Chst9 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048126.1 MGP_WSBEiJ_G0023476.1 mouse_genomes_project 18 22153749 22154058 - MGP_WSBEiJ_P0048126 Gm9955 protein_coding protein_coding MGP_WSBEiJ_T0048662.1 MGP_WSBEiJ_G0023702.1 mouse_genomes_project 18 51232503 51384808 + MGP_WSBEiJ_P0048662 Sncaip protein_coding protein_coding MGP_WSBEiJ_T0048663.1 MGP_WSBEiJ_G0023702.1 mouse_genomes_project 18 51232834 51302493 + MGP_WSBEiJ_P0048663 Sncaip protein_coding protein_coding MGP_WSBEiJ_T0048664.1 MGP_WSBEiJ_G0023702.1 mouse_genomes_project 18 51302416 51385003 + MGP_WSBEiJ_P0048664 Sncaip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048665.1 MGP_WSBEiJ_G0023702.1 mouse_genomes_project 18 51302416 51385296 + MGP_WSBEiJ_P0048665 Sncaip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048666.1 MGP_WSBEiJ_G0023702.1 mouse_genomes_project 18 51302416 51385296 + MGP_WSBEiJ_P0048666 Sncaip protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048667.1 MGP_WSBEiJ_G0023702.1 mouse_genomes_project 18 51302462 51384729 + MGP_WSBEiJ_P0048667 Sncaip protein_coding protein_coding MGP_WSBEiJ_T0048668.1 MGP_WSBEiJ_G0023702.1 mouse_genomes_project 18 51302462 51384729 + MGP_WSBEiJ_P0048668 Sncaip protein_coding protein_coding MGP_WSBEiJ_T0010076.1 MGP_WSBEiJ_G0008233.1 mouse_genomes_project 18 8873903 8873981 - Mir1901 miRNA miRNA MGP_WSBEiJ_T0048806.1 MGP_WSBEiJ_G0023756.1 mouse_genomes_project 18 60674266 60738616 - MGP_WSBEiJ_P0048806 Afap1l1 protein_coding protein_coding MGP_WSBEiJ_T0048807.1 MGP_WSBEiJ_G0023756.1 mouse_genomes_project 18 60674266 60738525 - MGP_WSBEiJ_P0048807 Afap1l1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048808.1 MGP_WSBEiJ_G0023756.1 mouse_genomes_project 18 60674944 60738574 - Afap1l1 protein_coding retained_intron MGP_WSBEiJ_T0048203.1 MGP_WSBEiJ_G0023511.1 mouse_genomes_project 18 32163083 32195876 + MGP_WSBEiJ_P0048203 Pkd2l2 protein_coding protein_coding MGP_WSBEiJ_T0048204.1 MGP_WSBEiJ_G0023511.1 mouse_genomes_project 18 32163083 32196869 + MGP_WSBEiJ_P0048204 Pkd2l2 protein_coding protein_coding MGP_WSBEiJ_T0098049.1 MGP_WSBEiJ_G0036712.1 mouse_genomes_project 18 65060737 65060797 - Gm25150 snRNA snRNA MGP_WSBEiJ_T0010094.1 MGP_WSBEiJ_G0008251.1 mouse_genomes_project 18 58993553 58993663 + Gm23576 miRNA miRNA MGP_WSBEiJ_T0048661.1 MGP_WSBEiJ_G0023701.1 mouse_genomes_project 18 51150004 51151994 + MGP_WSBEiJ_P0048661 Gykl1 protein_coding protein_coding MGP_WSBEiJ_T0048272.1 MGP_WSBEiJ_G0023535.1 mouse_genomes_project 18 33482181 33484283 - MGP_WSBEiJ_P0048272 Mzb1 protein_coding protein_coding MGP_WSBEiJ_T0049126.1 MGP_WSBEiJ_G0023850.1 mouse_genomes_project 18 77491125 77500258 + MGP_WSBEiJ_P0049126 Atp5a1 protein_coding protein_coding MGP_WSBEiJ_T0049127.1 MGP_WSBEiJ_G0023850.1 mouse_genomes_project 18 77491353 77500255 + MGP_WSBEiJ_P0049127 Atp5a1 protein_coding protein_coding MGP_WSBEiJ_T0049128.1 MGP_WSBEiJ_G0023850.1 mouse_genomes_project 18 77491389 77500044 + MGP_WSBEiJ_P0049128 Atp5a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049129.1 MGP_WSBEiJ_G0023850.1 mouse_genomes_project 18 77496343 77498488 + Atp5a1 protein_coding retained_intron MGP_WSBEiJ_T0049130.1 MGP_WSBEiJ_G0023850.1 mouse_genomes_project 18 77497220 77499278 + Atp5a1 protein_coding retained_intron MGP_WSBEiJ_T0048421.1 MGP_WSBEiJ_G0023613.1 mouse_genomes_project 18 35602416 35737851 + MGP_WSBEiJ_P0048421 Pcdhgb4 protein_coding protein_coding MGP_WSBEiJ_T0048422.1 MGP_WSBEiJ_G0023613.1 mouse_genomes_project 18 35602430 35611403 + Pcdhgb4 protein_coding processed_transcript MGP_WSBEiJ_T0048040.1 MGP_WSBEiJ_G0023438.1 mouse_genomes_project 18 11556253 11556697 + MGP_WSBEiJ_P0048040 Gm5160 protein_coding protein_coding MGP_WSBEiJ_T0047960.1 MGP_WSBEiJ_G0023416.1 mouse_genomes_project 18 6866492 6904980 - MGP_WSBEiJ_P0047960 Usp14 protein_coding protein_coding MGP_WSBEiJ_T0047961.1 MGP_WSBEiJ_G0023416.1 mouse_genomes_project 18 6866654 6904906 - MGP_WSBEiJ_P0047961 Usp14 protein_coding protein_coding MGP_WSBEiJ_T0047962.1 MGP_WSBEiJ_G0023416.1 mouse_genomes_project 18 6867960 6873288 - Usp14 protein_coding retained_intron MGP_WSBEiJ_T0047963.1 MGP_WSBEiJ_G0023416.1 mouse_genomes_project 18 6874538 6882694 - Usp14 protein_coding retained_intron MGP_WSBEiJ_T0047964.1 MGP_WSBEiJ_G0023416.1 mouse_genomes_project 18 6883637 6904920 - Usp14 protein_coding retained_intron MGP_WSBEiJ_T0047965.1 MGP_WSBEiJ_G0023416.1 mouse_genomes_project 18 6886285 6891211 - Usp14 protein_coding retained_intron MGP_WSBEiJ_T0047966.1 MGP_WSBEiJ_G0023416.1 mouse_genomes_project 18 6898989 6904861 - Usp14 protein_coding retained_intron MGP_WSBEiJ_T0048278.1 MGP_WSBEiJ_G0023538.1 mouse_genomes_project 18 33507551 33550914 - MGP_WSBEiJ_P0048278 Dnajc18 protein_coding protein_coding MGP_WSBEiJ_T0047980.1 MGP_WSBEiJ_G0023421.1 mouse_genomes_project 18 7538437 7553012 - MGP_WSBEiJ_P0047980 Abhd3 protein_coding protein_coding MGP_WSBEiJ_T0047981.1 MGP_WSBEiJ_G0023421.1 mouse_genomes_project 18 7539116 7600055 - MGP_WSBEiJ_P0047981 Abhd3 protein_coding protein_coding MGP_WSBEiJ_T0098046.1 MGP_WSBEiJ_G0036709.1 mouse_genomes_project 18 62957060 62957135 - Gm24384 snRNA snRNA MGP_WSBEiJ_T0048677.1 MGP_WSBEiJ_G0023708.1 mouse_genomes_project 18 52387683 52494178 + MGP_WSBEiJ_P0048677 Csnk1g3 protein_coding protein_coding MGP_WSBEiJ_T0048758.1 MGP_WSBEiJ_G0023739.1 mouse_genomes_project 18 59662531 59701276 + MGP_WSBEiJ_P0048758 Cd74 protein_coding protein_coding MGP_WSBEiJ_T0048601.1 MGP_WSBEiJ_G0023678.1 mouse_genomes_project 18 44685518 44715240 - MGP_WSBEiJ_P0048601 Fem1c protein_coding protein_coding MGP_WSBEiJ_T0048196.1 MGP_WSBEiJ_G0023509.1 mouse_genomes_project 18 32083360 32088860 + Srp19 protein_coding processed_transcript MGP_WSBEiJ_T0048197.1 MGP_WSBEiJ_G0023509.1 mouse_genomes_project 18 32083636 32089036 + Srp19 protein_coding processed_transcript MGP_WSBEiJ_T0048198.1 MGP_WSBEiJ_G0023509.1 mouse_genomes_project 18 32083658 32089066 + Srp19 protein_coding retained_intron MGP_WSBEiJ_T0048199.1 MGP_WSBEiJ_G0023509.1 mouse_genomes_project 18 32083658 32089114 + MGP_WSBEiJ_P0048199 Srp19 protein_coding protein_coding MGP_WSBEiJ_T0048200.1 MGP_WSBEiJ_G0023509.1 mouse_genomes_project 18 32083671 32088936 + MGP_WSBEiJ_P0048200 Srp19 protein_coding protein_coding MGP_WSBEiJ_T0048201.1 MGP_WSBEiJ_G0023509.1 mouse_genomes_project 18 32083689 32089068 + MGP_WSBEiJ_P0048201 Srp19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049248.1 MGP_WSBEiJ_G0023886.1 mouse_genomes_project 18 89315646 89391864 + MGP_WSBEiJ_P0049248 Cd226 protein_coding protein_coding MGP_WSBEiJ_T0049249.1 MGP_WSBEiJ_G0023886.1 mouse_genomes_project 18 89315713 89391038 + MGP_WSBEiJ_P0049249 Cd226 protein_coding protein_coding MGP_WSBEiJ_T0049072.1 MGP_WSBEiJ_G0023837.1 mouse_genomes_project 18 75461381 75800357 + MGP_WSBEiJ_P0049072 Zbtb7c protein_coding protein_coding MGP_WSBEiJ_T0049073.1 MGP_WSBEiJ_G0023837.1 mouse_genomes_project 18 75703351 75798239 + MGP_WSBEiJ_P0049073 Zbtb7c protein_coding protein_coding MGP_WSBEiJ_T0048403.1 MGP_WSBEiJ_G0023601.1 mouse_genomes_project 18 35398557 35405466 + MGP_WSBEiJ_P0048403 Pcdhb22 protein_coding protein_coding MGP_WSBEiJ_T0048404.1 MGP_WSBEiJ_G0023601.1 mouse_genomes_project 18 35399043 35402132 + MGP_WSBEiJ_P0048404 Pcdhb22 protein_coding protein_coding MGP_WSBEiJ_T0099287.1 MGP_WSBEiJ_G0037950.1 mouse_genomes_project 18 74491472 74491593 - Gm24559 snoRNA snoRNA MGP_WSBEiJ_T0017039.1 MGP_WSBEiJ_G0014785.1 mouse_genomes_project 18 48369621 48380511 - C030005K06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017040.1 MGP_WSBEiJ_G0014785.1 mouse_genomes_project 18 48373060 48380695 - C030005K06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017041.1 MGP_WSBEiJ_G0014785.1 mouse_genomes_project 18 48379128 48380695 - C030005K06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017042.1 MGP_WSBEiJ_G0014785.1 mouse_genomes_project 18 48379148 48380456 - C030005K06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0048223.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32396812 32418279 - MGP_WSBEiJ_P0048223 Cdc23 protein_coding protein_coding MGP_WSBEiJ_T0048224.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32397549 32418279 - MGP_WSBEiJ_P0048224 Cdc23 protein_coding protein_coding MGP_WSBEiJ_T0048225.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32399537 32400490 - Cdc23 protein_coding retained_intron MGP_WSBEiJ_T0048226.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32401678 32418262 - Cdc23 protein_coding retained_intron MGP_WSBEiJ_T0048227.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32401681 32402714 - Cdc23 protein_coding retained_intron MGP_WSBEiJ_T0048228.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32402680 32403506 - Cdc23 protein_coding retained_intron MGP_WSBEiJ_T0048229.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32407919 32411862 - Cdc23 protein_coding retained_intron MGP_WSBEiJ_T0048230.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32413396 32418262 - Cdc23 protein_coding retained_intron MGP_WSBEiJ_T0048231.1 MGP_WSBEiJ_G0023518.1 mouse_genomes_project 18 32414248 32418266 - Cdc23 protein_coding retained_intron MGP_WSBEiJ_T0099271.1 MGP_WSBEiJ_G0037934.1 mouse_genomes_project 18 30347480 30347617 - Gm25826 snoRNA snoRNA MGP_WSBEiJ_T0006914.1 MGP_WSBEiJ_G0005689.1 mouse_genomes_project 18 31516518 31517613 + Epb41l4aos lincRNA lincRNA MGP_WSBEiJ_T0006915.1 MGP_WSBEiJ_G0005689.1 mouse_genomes_project 18 31516565 31517596 + Epb41l4aos lincRNA lincRNA MGP_WSBEiJ_T0011267.1 MGP_WSBEiJ_G0009424.1 mouse_genomes_project 18 77524140 77524493 - Gm23954 misc_RNA misc_RNA MGP_WSBEiJ_T0048380.1 MGP_WSBEiJ_G0023581.1 mouse_genomes_project 18 35161133 35163721 + MGP_WSBEiJ_P0048380 Pcdhb1 protein_coding protein_coding MGP_WSBEiJ_T0048475.1 MGP_WSBEiJ_G0023630.1 mouse_genomes_project 18 36093258 36119455 - MGP_WSBEiJ_P0048475 Pcdh1 protein_coding protein_coding MGP_WSBEiJ_T0048476.1 MGP_WSBEiJ_G0023630.1 mouse_genomes_project 18 36096250 36110565 - MGP_WSBEiJ_P0048476 Pcdh1 protein_coding protein_coding MGP_WSBEiJ_T0048477.1 MGP_WSBEiJ_G0023630.1 mouse_genomes_project 18 36104095 36117171 - MGP_WSBEiJ_P0048477 Pcdh1 protein_coding protein_coding MGP_WSBEiJ_T0048478.1 MGP_WSBEiJ_G0023630.1 mouse_genomes_project 18 36104095 36119379 - MGP_WSBEiJ_P0048478 Pcdh1 protein_coding protein_coding MGP_WSBEiJ_T0048479.1 MGP_WSBEiJ_G0023630.1 mouse_genomes_project 18 36110845 36117963 - MGP_WSBEiJ_P0048479 Pcdh1 protein_coding protein_coding MGP_WSBEiJ_T0048480.1 MGP_WSBEiJ_G0023630.1 mouse_genomes_project 18 36110845 36111242 - MGP_WSBEiJ_P0048480 Pcdh1 protein_coding protein_coding MGP_WSBEiJ_T0017054.1 MGP_WSBEiJ_G0014789.1 mouse_genomes_project 18 66595697 66630322 - B430212C06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017055.1 MGP_WSBEiJ_G0014789.1 mouse_genomes_project 18 66595697 66602394 - B430212C06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017056.1 MGP_WSBEiJ_G0014789.1 mouse_genomes_project 18 66595877 66629802 - B430212C06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017057.1 MGP_WSBEiJ_G0014789.1 mouse_genomes_project 18 66597506 66602573 - B430212C06Rik processed_transcript retained_intron MGP_WSBEiJ_T0017058.1 MGP_WSBEiJ_G0014789.1 mouse_genomes_project 18 66597519 66602633 - B430212C06Rik processed_transcript processed_transcript MGP_WSBEiJ_T0048172.1 MGP_WSBEiJ_G0023500.1 mouse_genomes_project 18 30252349 30283904 - MGP_WSBEiJ_P0048172 Gypc protein_coding protein_coding MGP_WSBEiJ_T0048173.1 MGP_WSBEiJ_G0023500.1 mouse_genomes_project 18 30252352 30283850 - MGP_WSBEiJ_P0048173 Gypc protein_coding protein_coding MGP_WSBEiJ_T0048174.1 MGP_WSBEiJ_G0023500.1 mouse_genomes_project 18 30253819 30259456 - MGP_WSBEiJ_P0048174 Gypc protein_coding protein_coding MGP_WSBEiJ_T0011615.1 MGP_WSBEiJ_G0009762.1 mouse_genomes_project 18 35646860 35737851 + MGP_WSBEiJ_P0011615 Pcdhgb8 polymorphic_pseudogene polymorphic_pseudogene MGP_WSBEiJ_T0048247.1 MGP_WSBEiJ_G0023528.1 mouse_genomes_project 18 33021052 33027132 - MGP_WSBEiJ_P0048247 Lrrtm2 protein_coding protein_coding MGP_WSBEiJ_T0011258.1 MGP_WSBEiJ_G0009415.1 mouse_genomes_project 18 40676761 40676917 + Gm27457 misc_RNA misc_RNA MGP_WSBEiJ_T0049140.1 MGP_WSBEiJ_G0023857.1 mouse_genomes_project 18 79811043 79888489 + MGP_WSBEiJ_P0049140 Pard6g protein_coding protein_coding MGP_WSBEiJ_T0049004.1 MGP_WSBEiJ_G0023814.1 mouse_genomes_project 18 69945989 69969724 + MGP_WSBEiJ_P0049004 Stard6 protein_coding protein_coding MGP_WSBEiJ_T0049005.1 MGP_WSBEiJ_G0023814.1 mouse_genomes_project 18 69946107 69969464 + MGP_WSBEiJ_P0049005 Stard6 protein_coding protein_coding MGP_WSBEiJ_T0049006.1 MGP_WSBEiJ_G0023814.1 mouse_genomes_project 18 69946163 69969472 + MGP_WSBEiJ_P0049006 Stard6 protein_coding protein_coding MGP_WSBEiJ_T0049007.1 MGP_WSBEiJ_G0023814.1 mouse_genomes_project 18 69946201 69969468 + MGP_WSBEiJ_P0049007 Stard6 protein_coding protein_coding MGP_WSBEiJ_T0049008.1 MGP_WSBEiJ_G0023814.1 mouse_genomes_project 18 69946576 69959705 + MGP_WSBEiJ_P0049008 Stard6 protein_coding protein_coding MGP_WSBEiJ_T0049009.1 MGP_WSBEiJ_G0023814.1 mouse_genomes_project 18 69946759 69967296 + MGP_WSBEiJ_P0049009 Stard6 protein_coding protein_coding MGP_WSBEiJ_T0049125.1 MGP_WSBEiJ_G0023849.1 mouse_genomes_project 18 77474634 77484772 - MGP_WSBEiJ_P0049125 Haus1 protein_coding protein_coding MGP_WSBEiJ_T0048336.1 MGP_WSBEiJ_G0023556.1 mouse_genomes_project 18 34644556 34646223 - MGP_WSBEiJ_P0048336 Cd14 protein_coding protein_coding MGP_WSBEiJ_T0048250.1 MGP_WSBEiJ_G0023531.1 mouse_genomes_project 18 33379709 33405338 + MGP_WSBEiJ_P0048250 Gm28285 protein_coding protein_coding MGP_WSBEiJ_T0048251.1 MGP_WSBEiJ_G0023531.1 mouse_genomes_project 18 33379713 33385778 + Gm28285 protein_coding processed_transcript MGP_WSBEiJ_T0048252.1 MGP_WSBEiJ_G0023531.1 mouse_genomes_project 18 33379723 33408008 + MGP_WSBEiJ_P0048252 Gm28285 protein_coding protein_coding MGP_WSBEiJ_T0048253.1 MGP_WSBEiJ_G0023531.1 mouse_genomes_project 18 33379739 33398154 + Gm28285 protein_coding processed_transcript MGP_WSBEiJ_T0048577.1 MGP_WSBEiJ_G0023670.1 mouse_genomes_project 18 42500691 42527475 + MGP_WSBEiJ_P0048577 Myot protein_coding protein_coding MGP_WSBEiJ_T0048578.1 MGP_WSBEiJ_G0023670.1 mouse_genomes_project 18 42500691 42527475 + MGP_WSBEiJ_P0048578 Myot protein_coding protein_coding MGP_WSBEiJ_T0013011.1 MGP_WSBEiJ_G0011141.1 mouse_genomes_project 18 43264556 43265545 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010068.1 MGP_WSBEiJ_G0008225.1 mouse_genomes_project 18 2472714 2472817 + Gm22709 miRNA miRNA MGP_WSBEiJ_T0048817.1 MGP_WSBEiJ_G0023764.1 mouse_genomes_project 18 61588735 61727678 - MGP_WSBEiJ_P0048817 Spink13 protein_coding protein_coding MGP_WSBEiJ_T0048597.1 MGP_WSBEiJ_G0023675.1 mouse_genomes_project 18 44322245 44361438 - MGP_WSBEiJ_P0048597 Trim36 protein_coding protein_coding MGP_WSBEiJ_T0048598.1 MGP_WSBEiJ_G0023675.1 mouse_genomes_project 18 44322245 44376369 - MGP_WSBEiJ_P0048598 Trim36 protein_coding protein_coding MGP_WSBEiJ_T0049071.1 MGP_WSBEiJ_G0023836.1 mouse_genomes_project 18 75053224 75328106 - MGP_WSBEiJ_P0049071 Ctif protein_coding protein_coding MGP_WSBEiJ_T0006946.1 MGP_WSBEiJ_G0005713.1 mouse_genomes_project 18 82668170 82672707 - 2210420H20Rik lincRNA lincRNA MGP_WSBEiJ_T0048052.1 MGP_WSBEiJ_G0023445.1 mouse_genomes_project 18 13776856 14004973 - MGP_WSBEiJ_P0048052 Cdh2 protein_coding protein_coding MGP_WSBEiJ_T0048053.1 MGP_WSBEiJ_G0023445.1 mouse_genomes_project 18 13777000 13861738 - MGP_WSBEiJ_P0048053 Cdh2 protein_coding protein_coding MGP_WSBEiJ_T0048054.1 MGP_WSBEiJ_G0023445.1 mouse_genomes_project 18 13964588 14003336 - Cdh2 protein_coding retained_intron MGP_WSBEiJ_T0048067.1 MGP_WSBEiJ_G0023452.1 mouse_genomes_project 18 17999460 18008533 + MGP_WSBEiJ_P0048067 Ttr protein_coding protein_coding MGP_WSBEiJ_T0049050.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74010096 74197854 + MGP_WSBEiJ_P0049050 Myo5b protein_coding protein_coding MGP_WSBEiJ_T0049051.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74010124 74086365 + Myo5b protein_coding processed_transcript MGP_WSBEiJ_T0049052.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74011697 74343812 + MGP_WSBEiJ_P0049052 Myo5b protein_coding protein_coding MGP_WSBEiJ_T0049053.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74011765 74245699 + Myo5b protein_coding processed_transcript MGP_WSBEiJ_T0049054.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74011767 74343124 + MGP_WSBEiJ_P0049054 Myo5b protein_coding protein_coding MGP_WSBEiJ_T0049055.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74215215 74228153 + Myo5b protein_coding processed_transcript MGP_WSBEiJ_T0049056.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74293447 74303113 + Myo5b protein_coding processed_transcript MGP_WSBEiJ_T0049057.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74299577 74303106 + MGP_WSBEiJ_P0049057 Myo5b protein_coding protein_coding MGP_WSBEiJ_T0049058.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74300851 74303104 + Myo5b protein_coding retained_intron MGP_WSBEiJ_T0049059.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74301640 74308487 + Myo5b protein_coding processed_transcript MGP_WSBEiJ_T0049060.1 MGP_WSBEiJ_G0023829.1 mouse_genomes_project 18 74319708 74343796 + Myo5b protein_coding retained_intron MGP_WSBEiJ_T0006922.1 MGP_WSBEiJ_G0005694.1 mouse_genomes_project 18 36148036 36160761 - 1700086O06Rik lincRNA lincRNA MGP_WSBEiJ_T0006923.1 MGP_WSBEiJ_G0005694.1 mouse_genomes_project 18 36148036 36160394 - 1700086O06Rik lincRNA lincRNA MGP_WSBEiJ_T0003747.1 MGP_WSBEiJ_G0003368.1 mouse_genomes_project 18 60632745 60634105 - Gm38165 antisense antisense MGP_WSBEiJ_T0048552.1 MGP_WSBEiJ_G0023656.1 mouse_genomes_project 18 41464300 41584961 - MGP_WSBEiJ_P0048552 Dpysl3 protein_coding protein_coding MGP_WSBEiJ_T0048553.1 MGP_WSBEiJ_G0023656.1 mouse_genomes_project 18 41466042 41467352 - Dpysl3 protein_coding processed_transcript MGP_WSBEiJ_T0048554.1 MGP_WSBEiJ_G0023656.1 mouse_genomes_project 18 41467548 41517716 - MGP_WSBEiJ_P0048554 Dpysl3 protein_coding protein_coding MGP_WSBEiJ_T0048555.1 MGP_WSBEiJ_G0023656.1 mouse_genomes_project 18 41467609 41538178 - MGP_WSBEiJ_P0048555 Dpysl3 protein_coding protein_coding MGP_WSBEiJ_T0048556.1 MGP_WSBEiJ_G0023656.1 mouse_genomes_project 18 41474078 41489712 - MGP_WSBEiJ_P0048556 Dpysl3 protein_coding protein_coding MGP_WSBEiJ_T0048557.1 MGP_WSBEiJ_G0023656.1 mouse_genomes_project 18 41477825 41489307 - MGP_WSBEiJ_P0048557 Dpysl3 protein_coding protein_coding MGP_WSBEiJ_T0049082.1 MGP_WSBEiJ_G0023840.1 mouse_genomes_project 18 76579563 76591168 + MGP_WSBEiJ_P0049082 Ier3ip1 protein_coding protein_coding MGP_WSBEiJ_T0049083.1 MGP_WSBEiJ_G0023840.1 mouse_genomes_project 18 76579591 76591168 + Ier3ip1 protein_coding processed_transcript MGP_WSBEiJ_T0049084.1 MGP_WSBEiJ_G0023840.1 mouse_genomes_project 18 76579609 76589320 + Ier3ip1 protein_coding retained_intron MGP_WSBEiJ_T0049086.1 MGP_WSBEiJ_G0023840.1 mouse_genomes_project 18 76588856 76590254 + Ier3ip1 protein_coding retained_intron MGP_WSBEiJ_T0048602.1 MGP_WSBEiJ_G0023679.1 mouse_genomes_project 18 44751553 44768107 - MGP_WSBEiJ_P0048602 Ticam2 protein_coding protein_coding MGP_WSBEiJ_T0048604.1 MGP_WSBEiJ_G0023679.1 mouse_genomes_project 18 44764786 44768107 - Ticam2 protein_coding retained_intron MGP_WSBEiJ_T0048651.1 MGP_WSBEiJ_G0023693.1 mouse_genomes_project 18 48620017 48624668 + MGP_WSBEiJ_P0048651 Fam170a protein_coding protein_coding MGP_WSBEiJ_T0048342.1 MGP_WSBEiJ_G0023561.1 mouse_genomes_project 18 34682875 34685415 - Dnd1 protein_coding retained_intron MGP_WSBEiJ_T0048343.1 MGP_WSBEiJ_G0023561.1 mouse_genomes_project 18 34682877 34685399 - MGP_WSBEiJ_P0048343 Dnd1 protein_coding protein_coding MGP_WSBEiJ_T0048344.1 MGP_WSBEiJ_G0023561.1 mouse_genomes_project 18 34682879 34685399 - Dnd1 protein_coding retained_intron MGP_WSBEiJ_T0048698.1 MGP_WSBEiJ_G0023715.1 mouse_genomes_project 18 55456515 55625975 - MGP_WSBEiJ_P0048698 March3 protein_coding protein_coding MGP_WSBEiJ_T0048699.1 MGP_WSBEiJ_G0023715.1 mouse_genomes_project 18 55474120 55511028 - MGP_WSBEiJ_P0048699 March3 protein_coding protein_coding MGP_WSBEiJ_T0048700.1 MGP_WSBEiJ_G0023715.1 mouse_genomes_project 18 55502679 55625942 - March3 protein_coding retained_intron MGP_WSBEiJ_T0049132.1 MGP_WSBEiJ_G0023852.1 mouse_genomes_project 18 77621851 77726517 + MGP_WSBEiJ_P0049132 Epg5 protein_coding protein_coding MGP_WSBEiJ_T0049253.1 MGP_WSBEiJ_G0023889.1 mouse_genomes_project 18 90675060 90688325 + MGP_WSBEiJ_P0049253 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048346.1 MGP_WSBEiJ_G0023563.1 mouse_genomes_project 18 34704647 34714718 + Hars2 protein_coding processed_transcript MGP_WSBEiJ_T0048347.1 MGP_WSBEiJ_G0023563.1 mouse_genomes_project 18 34704647 34716662 + MGP_WSBEiJ_P0048347 Hars2 protein_coding protein_coding MGP_WSBEiJ_T0048348.1 MGP_WSBEiJ_G0023563.1 mouse_genomes_project 18 34704870 34715794 + MGP_WSBEiJ_P0048348 Hars2 protein_coding protein_coding MGP_WSBEiJ_T0048349.1 MGP_WSBEiJ_G0023563.1 mouse_genomes_project 18 34704908 34709511 + Hars2 protein_coding retained_intron MGP_WSBEiJ_T0048350.1 MGP_WSBEiJ_G0023563.1 mouse_genomes_project 18 34711113 34712362 + Hars2 protein_coding retained_intron MGP_WSBEiJ_T0048351.1 MGP_WSBEiJ_G0023563.1 mouse_genomes_project 18 34711919 34714259 + Hars2 protein_coding retained_intron MGP_WSBEiJ_T0048352.1 MGP_WSBEiJ_G0023563.1 mouse_genomes_project 18 34714112 34715553 + Hars2 protein_coding retained_intron MGP_WSBEiJ_T0048312.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34466967 34492895 + MGP_WSBEiJ_P0048312 Ankhd1 protein_coding protein_coding MGP_WSBEiJ_T0048313.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34467591 34571332 + MGP_WSBEiJ_P0048313 Ankhd1 protein_coding protein_coding MGP_WSBEiJ_T0048314.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34467591 34571332 + MGP_WSBEiJ_P0048314 Ankhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048315.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34467658 34578340 + MGP_WSBEiJ_P0048315 Ankhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048316.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34510613 34537512 + MGP_WSBEiJ_P0048316 Ankhd1 protein_coding protein_coding MGP_WSBEiJ_T0048317.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34515972 34546232 + Ankhd1 protein_coding processed_transcript MGP_WSBEiJ_T0048318.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34525860 34546220 + MGP_WSBEiJ_P0048318 Ankhd1 protein_coding protein_coding MGP_WSBEiJ_T0048319.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34526263 34537102 + Ankhd1 protein_coding retained_intron MGP_WSBEiJ_T0048320.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34550189 34554826 + MGP_WSBEiJ_P0048320 Ankhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048321.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34550415 34554832 + MGP_WSBEiJ_P0048321 Ankhd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048322.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34553212 34556108 + Ankhd1 protein_coding retained_intron MGP_WSBEiJ_T0048323.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34556135 34571337 + MGP_WSBEiJ_P0048323 Ankhd1 protein_coding protein_coding MGP_WSBEiJ_T0048324.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34559587 34578340 + MGP_WSBEiJ_P0048324 Ankhd1 protein_coding protein_coding MGP_WSBEiJ_T0048325.1 MGP_WSBEiJ_G0023551.1 mouse_genomes_project 18 34567933 34571234 + MGP_WSBEiJ_P0048325 Ankhd1 protein_coding protein_coding MGP_WSBEiJ_T0011264.1 MGP_WSBEiJ_G0009421.1 mouse_genomes_project 18 65910926 65911245 + Gm22219 misc_RNA misc_RNA MGP_WSBEiJ_T0048393.1 MGP_WSBEiJ_G0023591.1 mouse_genomes_project 18 35319853 35323047 + MGP_WSBEiJ_P0048393 protein_coding protein_coding MGP_WSBEiJ_T0048634.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48302971 48420320 + MGP_WSBEiJ_P0048634 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048635.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48303035 48378150 + Tnfaip8 protein_coding processed_transcript MGP_WSBEiJ_T0048636.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48303073 48422166 + MGP_WSBEiJ_P0048636 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048637.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48303079 48437131 + Tnfaip8 protein_coding processed_transcript MGP_WSBEiJ_T0048638.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48346616 48420113 + MGP_WSBEiJ_P0048638 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048639.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48358123 48420170 + MGP_WSBEiJ_P0048639 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048640.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48358133 48373308 + Tnfaip8 protein_coding processed_transcript MGP_WSBEiJ_T0048641.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48358134 48420005 + MGP_WSBEiJ_P0048641 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048642.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48373620 48373987 + MGP_WSBEiJ_P0048642 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048643.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48378539 48380266 + Tnfaip8 protein_coding retained_intron MGP_WSBEiJ_T0048644.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48378547 48419676 + MGP_WSBEiJ_P0048644 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048645.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48378550 48419789 + MGP_WSBEiJ_P0048645 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048646.1 MGP_WSBEiJ_G0023691.1 mouse_genomes_project 18 48380132 48421101 + MGP_WSBEiJ_P0048646 Tnfaip8 protein_coding protein_coding MGP_WSBEiJ_T0048600.1 MGP_WSBEiJ_G0023677.1 mouse_genomes_project 18 44458152 44487124 - MGP_WSBEiJ_P0048600 Ccdc112 protein_coding protein_coding MGP_WSBEiJ_T0048156.1 MGP_WSBEiJ_G0023489.1 mouse_genomes_project 18 29496657 29606255 + MGP_WSBEiJ_P0048156 Wdr33 protein_coding protein_coding MGP_WSBEiJ_T0048157.1 MGP_WSBEiJ_G0023489.1 mouse_genomes_project 18 29496657 29535311 + MGP_WSBEiJ_P0048157 Wdr33 protein_coding protein_coding MGP_WSBEiJ_T0048707.1 MGP_WSBEiJ_G0023719.1 mouse_genomes_project 18 56187524 56199045 + MGP_WSBEiJ_P0048707 Ctxn3 protein_coding protein_coding MGP_WSBEiJ_T0048586.1 MGP_WSBEiJ_G0023673.1 mouse_genomes_project 18 43002691 43068251 + MGP_WSBEiJ_P0048586 Ythdc2 protein_coding protein_coding MGP_WSBEiJ_T0048587.1 MGP_WSBEiJ_G0023673.1 mouse_genomes_project 18 43025101 43026428 + Ythdc2 protein_coding retained_intron MGP_WSBEiJ_T0048588.1 MGP_WSBEiJ_G0023673.1 mouse_genomes_project 18 43031916 43068258 + MGP_WSBEiJ_P0048588 Ythdc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048589.1 MGP_WSBEiJ_G0023673.1 mouse_genomes_project 18 43032106 43032596 + Ythdc2 protein_coding retained_intron MGP_WSBEiJ_T0097011.1 MGP_WSBEiJ_G0035692.1 mouse_genomes_project 18 74618734 74618826 + Gm27781 rRNA rRNA MGP_WSBEiJ_T0017020.1 MGP_WSBEiJ_G0014779.1 mouse_genomes_project 18 33379672 33384618 + Snhg4 processed_transcript lincRNA MGP_WSBEiJ_T0017021.1 MGP_WSBEiJ_G0014779.1 mouse_genomes_project 18 33379711 33381066 + Snhg4 processed_transcript retained_intron MGP_WSBEiJ_T0017022.1 MGP_WSBEiJ_G0014779.1 mouse_genomes_project 18 33379713 33383532 + Snhg4 processed_transcript retained_intron MGP_WSBEiJ_T0017023.1 MGP_WSBEiJ_G0014779.1 mouse_genomes_project 18 33379723 33382266 + Snhg4 processed_transcript retained_intron MGP_WSBEiJ_T0017024.1 MGP_WSBEiJ_G0014779.1 mouse_genomes_project 18 33382440 33383698 + Snhg4 processed_transcript retained_intron MGP_WSBEiJ_T0048628.1 MGP_WSBEiJ_G0023690.1 mouse_genomes_project 18 48142793 48279281 + MGP_WSBEiJ_P0048628 Dmxl1 protein_coding protein_coding MGP_WSBEiJ_T0048629.1 MGP_WSBEiJ_G0023690.1 mouse_genomes_project 18 48143120 48280500 + MGP_WSBEiJ_P0048629 Dmxl1 protein_coding protein_coding MGP_WSBEiJ_T0048630.1 MGP_WSBEiJ_G0023690.1 mouse_genomes_project 18 48143213 48277966 + MGP_WSBEiJ_P0048630 Dmxl1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048631.1 MGP_WSBEiJ_G0023690.1 mouse_genomes_project 18 48206961 48247954 + Dmxl1 protein_coding retained_intron MGP_WSBEiJ_T0048632.1 MGP_WSBEiJ_G0023690.1 mouse_genomes_project 18 48264573 48269105 + Dmxl1 protein_coding retained_intron MGP_WSBEiJ_T0048633.1 MGP_WSBEiJ_G0023690.1 mouse_genomes_project 18 48270930 48274612 + Dmxl1 protein_coding retained_intron MGP_WSBEiJ_T0099279.1 MGP_WSBEiJ_G0037942.1 mouse_genomes_project 18 44105569 44105696 + Gm26262 snoRNA snoRNA MGP_WSBEiJ_T0048528.1 MGP_WSBEiJ_G0023642.1 mouse_genomes_project 18 38260269 38260994 + MGP_WSBEiJ_P0048528 2900055J20Rik protein_coding protein_coding MGP_WSBEiJ_T0098029.1 MGP_WSBEiJ_G0036692.1 mouse_genomes_project 18 30728039 30728143 - Gm22814 snRNA snRNA MGP_WSBEiJ_T0048069.1 MGP_WSBEiJ_G0023454.1 mouse_genomes_project 18 18177449 18258520 - MGP_WSBEiJ_P0048069 Trappc8 protein_coding protein_coding MGP_WSBEiJ_T0048070.1 MGP_WSBEiJ_G0023454.1 mouse_genomes_project 18 18178922 18258808 - MGP_WSBEiJ_P0048070 Trappc8 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048071.1 MGP_WSBEiJ_G0023454.1 mouse_genomes_project 18 18207849 18258520 - MGP_WSBEiJ_P0048071 Trappc8 protein_coding protein_coding MGP_WSBEiJ_T0048426.1 MGP_WSBEiJ_G0023616.1 mouse_genomes_project 18 35620128 35737851 + MGP_WSBEiJ_P0048426 Pcdhga9 protein_coding protein_coding MGP_WSBEiJ_T0048427.1 MGP_WSBEiJ_G0023616.1 mouse_genomes_project 18 35620561 35623598 + Pcdhga9 protein_coding retained_intron MGP_WSBEiJ_T0048358.1 MGP_WSBEiJ_G0023567.1 mouse_genomes_project 18 34855219 35081773 + MGP_WSBEiJ_P0048358 Pcdha3 protein_coding protein_coding MGP_WSBEiJ_T0048704.1 MGP_WSBEiJ_G0023717.1 mouse_genomes_project 18 55842141 56006336 + MGP_WSBEiJ_P0048704 Megf10 protein_coding protein_coding MGP_WSBEiJ_T0048705.1 MGP_WSBEiJ_G0023717.1 mouse_genomes_project 18 55851809 56001597 + MGP_WSBEiJ_P0048705 Megf10 protein_coding protein_coding MGP_WSBEiJ_T0011245.1 MGP_WSBEiJ_G0009402.1 mouse_genomes_project 18 13189216 13189517 + Gm22389 misc_RNA misc_RNA MGP_WSBEiJ_T0048326.1 MGP_WSBEiJ_G0023552.1 mouse_genomes_project 18 34576482 34578340 + MGP_WSBEiJ_P0048326 Eif4ebp3 protein_coding protein_coding MGP_WSBEiJ_T0010084.1 MGP_WSBEiJ_G0008241.1 mouse_genomes_project 18 35750569 35750625 - Mir6979 miRNA miRNA MGP_WSBEiJ_T0048812.1 MGP_WSBEiJ_G0023759.1 mouse_genomes_project 18 61153717 61155850 - MGP_WSBEiJ_P0048812 Adrb2 protein_coding protein_coding MGP_WSBEiJ_T0099263.1 MGP_WSBEiJ_G0037926.1 mouse_genomes_project 18 7654144 7654266 + Gm25116 snoRNA snoRNA MGP_WSBEiJ_T0010072.1 MGP_WSBEiJ_G0008229.1 mouse_genomes_project 18 7251190 7251356 - Gm44409 miRNA miRNA MGP_WSBEiJ_T0048341.1 MGP_WSBEiJ_G0023560.1 mouse_genomes_project 18 34679438 34682913 + MGP_WSBEiJ_P0048341 Wdr55 protein_coding protein_coding MGP_WSBEiJ_T0006907.1 MGP_WSBEiJ_G0005682.1 mouse_genomes_project 18 29107685 29116462 + Gm26658 lincRNA lincRNA MGP_WSBEiJ_T0097498.1 MGP_WSBEiJ_G0036163.1 mouse_genomes_project 18 80783944 80792883 - Gm27238 sense_overlapping sense_overlapping MGP_WSBEiJ_T0098025.1 MGP_WSBEiJ_G0036688.1 mouse_genomes_project 18 9206496 9206614 + Gm25289 snRNA snRNA MGP_WSBEiJ_T0006904.1 MGP_WSBEiJ_G0005681.1 mouse_genomes_project 18 14198429 14321132 + 1700001G01Rik lincRNA lincRNA MGP_WSBEiJ_T0006905.1 MGP_WSBEiJ_G0005681.1 mouse_genomes_project 18 14198454 14226283 + 1700001G01Rik lincRNA lincRNA MGP_WSBEiJ_T0006906.1 MGP_WSBEiJ_G0005681.1 mouse_genomes_project 18 14216619 14321132 + 1700001G01Rik lincRNA lincRNA MGP_WSBEiJ_T0049168.1 MGP_WSBEiJ_G0023864.1 mouse_genomes_project 18 80072919 80145608 - MGP_WSBEiJ_P0049168 Kcng2 protein_coding protein_coding MGP_WSBEiJ_T0049169.1 MGP_WSBEiJ_G0023864.1 mouse_genomes_project 18 80102343 80144690 - MGP_WSBEiJ_P0049169 Kcng2 protein_coding protein_coding MGP_WSBEiJ_T0049170.1 MGP_WSBEiJ_G0023864.1 mouse_genomes_project 18 80102608 80145004 - MGP_WSBEiJ_P0049170 Kcng2 protein_coding protein_coding MGP_WSBEiJ_T0013007.1 MGP_WSBEiJ_G0011137.1 mouse_genomes_project 18 36722520 36723368 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0012993.1 MGP_WSBEiJ_G0011123.1 mouse_genomes_project 18 18455510 18455954 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048766.1 MGP_WSBEiJ_G0023742.1 mouse_genomes_project 18 59820423 59887849 + MGP_WSBEiJ_P0048766 Camk2a protein_coding protein_coding MGP_WSBEiJ_T0048767.1 MGP_WSBEiJ_G0023742.1 mouse_genomes_project 18 59820437 59838007 + Camk2a protein_coding retained_intron MGP_WSBEiJ_T0048768.1 MGP_WSBEiJ_G0023742.1 mouse_genomes_project 18 59820437 59886097 + MGP_WSBEiJ_P0048768 Camk2a protein_coding protein_coding MGP_WSBEiJ_T0048769.1 MGP_WSBEiJ_G0023742.1 mouse_genomes_project 18 59820530 59838025 + MGP_WSBEiJ_P0048769 Camk2a protein_coding protein_coding MGP_WSBEiJ_T0048770.1 MGP_WSBEiJ_G0023742.1 mouse_genomes_project 18 59821754 59851288 + MGP_WSBEiJ_P0048770 Camk2a protein_coding protein_coding MGP_WSBEiJ_T0048771.1 MGP_WSBEiJ_G0023742.1 mouse_genomes_project 18 59860304 59884555 + MGP_WSBEiJ_P0048771 Camk2a protein_coding protein_coding MGP_WSBEiJ_T0048772.1 MGP_WSBEiJ_G0023742.1 mouse_genomes_project 18 59860350 59885389 + MGP_WSBEiJ_P0048772 Camk2a protein_coding protein_coding MGP_WSBEiJ_T0048731.1 MGP_WSBEiJ_G0023733.1 mouse_genomes_project 18 59404204 59431904 + MGP_WSBEiJ_P0048731 Dctn4 protein_coding protein_coding MGP_WSBEiJ_T0048732.1 MGP_WSBEiJ_G0023733.1 mouse_genomes_project 18 59404214 59431907 + MGP_WSBEiJ_P0048732 Dctn4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0000984.1 MGP_WSBEiJ_G0000919.1 mouse_genomes_project 18 84354766 84358244 - TEC TEC MGP_WSBEiJ_T0006909.1 MGP_WSBEiJ_G0005684.1 mouse_genomes_project 18 29554505 29556784 - Gm26823 lincRNA lincRNA MGP_WSBEiJ_T0048849.1 MGP_WSBEiJ_G0023773.1 mouse_genomes_project 18 63403335 63467546 + MGP_WSBEiJ_P0048849 Onecut2 protein_coding protein_coding MGP_WSBEiJ_T0048850.1 MGP_WSBEiJ_G0023773.1 mouse_genomes_project 18 63403335 63467548 + MGP_WSBEiJ_P0048850 Onecut2 protein_coding protein_coding MGP_WSBEiJ_T0010085.1 MGP_WSBEiJ_G0008242.1 mouse_genomes_project 18 35872475 35872590 - Mir6981 miRNA miRNA MGP_WSBEiJ_T0003736.1 MGP_WSBEiJ_G0003359.1 mouse_genomes_project 18 35697626 35699831 - BC037039 antisense antisense MGP_WSBEiJ_T0098042.1 MGP_WSBEiJ_G0036705.1 mouse_genomes_project 18 60041911 60042016 - Gm26403 snRNA snRNA MGP_WSBEiJ_T0048485.1 MGP_WSBEiJ_G0023633.1 mouse_genomes_project 18 36210329 36236778 + MGP_WSBEiJ_P0048485 Rnf14 protein_coding protein_coding MGP_WSBEiJ_T0011265.1 MGP_WSBEiJ_G0009422.1 mouse_genomes_project 18 69228260 69228370 - Gm22508 misc_RNA misc_RNA MGP_WSBEiJ_T0048530.1 MGP_WSBEiJ_G0023644.1 mouse_genomes_project 18 39953618 40032524 - MGP_WSBEiJ_P0048530 Prelid2 protein_coding protein_coding MGP_WSBEiJ_T0048603.1 MGP_WSBEiJ_G0023680.1 mouse_genomes_project 18 44752633 44790323 - MGP_WSBEiJ_P0048603 Tmed7 protein_coding protein_coding MGP_WSBEiJ_T0048605.1 MGP_WSBEiJ_G0023680.1 mouse_genomes_project 18 44778384 44790525 - Tmed7 protein_coding retained_intron MGP_WSBEiJ_T0048606.1 MGP_WSBEiJ_G0023680.1 mouse_genomes_project 18 44780477 44790544 - MGP_WSBEiJ_P0048606 Tmed7 protein_coding protein_coding MGP_WSBEiJ_T0047867.1 MGP_WSBEiJ_G0023393.1 mouse_genomes_project 18 1002868 1021594 + MGP_WSBEiJ_P0047867 Lyzl1 protein_coding protein_coding MGP_WSBEiJ_T0047868.1 MGP_WSBEiJ_G0023393.1 mouse_genomes_project 18 1002898 1021594 + MGP_WSBEiJ_P0047868 Lyzl1 protein_coding protein_coding MGP_WSBEiJ_T0049139.1 MGP_WSBEiJ_G0023856.1 mouse_genomes_project 18 78473437 78849039 - MGP_WSBEiJ_P0049139 Setbp1 protein_coding protein_coding MGP_WSBEiJ_T0048400.1 MGP_WSBEiJ_G0023598.1 mouse_genomes_project 18 35377669 35384810 + MGP_WSBEiJ_P0048400 Pcdhb19 protein_coding protein_coding MGP_WSBEiJ_T0047822.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 64696 127425 - MGP_WSBEiJ_P0047822 Crem protein_coding protein_coding MGP_WSBEiJ_T0047823.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65002 139129 - MGP_WSBEiJ_P0047823 Crem protein_coding protein_coding MGP_WSBEiJ_T0047824.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65004 98539 - MGP_WSBEiJ_P0047824 Crem protein_coding protein_coding MGP_WSBEiJ_T0047825.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65004 139039 - MGP_WSBEiJ_P0047825 Crem protein_coding protein_coding MGP_WSBEiJ_T0047826.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65004 139039 - MGP_WSBEiJ_P0047826 Crem protein_coding protein_coding MGP_WSBEiJ_T0047827.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65004 139039 - MGP_WSBEiJ_P0047827 Crem protein_coding protein_coding MGP_WSBEiJ_T0047828.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65004 138938 - MGP_WSBEiJ_P0047828 Crem protein_coding protein_coding MGP_WSBEiJ_T0047829.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65605 80831 - MGP_WSBEiJ_P0047829 Crem protein_coding protein_coding MGP_WSBEiJ_T0047830.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65611 138963 - Crem protein_coding processed_transcript MGP_WSBEiJ_T0047831.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65909 139198 - MGP_WSBEiJ_P0047831 Crem protein_coding protein_coding MGP_WSBEiJ_T0047832.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 65912 98536 - MGP_WSBEiJ_P0047832 Crem protein_coding protein_coding MGP_WSBEiJ_T0047833.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66038 80809 - MGP_WSBEiJ_P0047833 Crem protein_coding protein_coding MGP_WSBEiJ_T0047834.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66071 127341 - MGP_WSBEiJ_P0047834 Crem protein_coding protein_coding MGP_WSBEiJ_T0047835.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66162 125308 - MGP_WSBEiJ_P0047835 Crem protein_coding protein_coding MGP_WSBEiJ_T0047836.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66182 80194 - MGP_WSBEiJ_P0047836 Crem protein_coding protein_coding MGP_WSBEiJ_T0047837.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66194 80140 - MGP_WSBEiJ_P0047837 Crem protein_coding protein_coding MGP_WSBEiJ_T0047838.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66206 125312 - MGP_WSBEiJ_P0047838 Crem protein_coding protein_coding MGP_WSBEiJ_T0047839.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66220 80831 - MGP_WSBEiJ_P0047839 Crem protein_coding protein_coding MGP_WSBEiJ_T0047840.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66223 125308 - MGP_WSBEiJ_P0047840 Crem protein_coding protein_coding MGP_WSBEiJ_T0047841.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66233 127341 - MGP_WSBEiJ_P0047841 Crem protein_coding protein_coding MGP_WSBEiJ_T0047842.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66233 127341 - MGP_WSBEiJ_P0047842 Crem protein_coding protein_coding MGP_WSBEiJ_T0047843.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66233 127341 - MGP_WSBEiJ_P0047843 Crem protein_coding protein_coding MGP_WSBEiJ_T0047844.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66233 138983 - MGP_WSBEiJ_P0047844 Crem protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047845.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66233 127341 - MGP_WSBEiJ_P0047845 Crem protein_coding protein_coding MGP_WSBEiJ_T0047846.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66236 109426 - MGP_WSBEiJ_P0047846 Crem protein_coding protein_coding MGP_WSBEiJ_T0047847.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66236 109291 - MGP_WSBEiJ_P0047847 Crem protein_coding protein_coding MGP_WSBEiJ_T0047848.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66236 109291 - MGP_WSBEiJ_P0047848 Crem protein_coding protein_coding MGP_WSBEiJ_T0047849.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66236 125308 - MGP_WSBEiJ_P0047849 Crem protein_coding protein_coding MGP_WSBEiJ_T0047850.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66281 80163 - MGP_WSBEiJ_P0047850 Crem protein_coding protein_coding MGP_WSBEiJ_T0047851.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66487 125308 - MGP_WSBEiJ_P0047851 Crem protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047852.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66493 80800 - MGP_WSBEiJ_P0047852 Crem protein_coding protein_coding MGP_WSBEiJ_T0047853.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66633 109468 - MGP_WSBEiJ_P0047853 Crem protein_coding protein_coding MGP_WSBEiJ_T0047854.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 66633 98432 - MGP_WSBEiJ_P0047854 Crem protein_coding protein_coding MGP_WSBEiJ_T0047855.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 82959 98521 - Crem protein_coding processed_transcript MGP_WSBEiJ_T0047856.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 86693 98536 - Crem protein_coding retained_intron MGP_WSBEiJ_T0047857.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 87116 98534 - Crem protein_coding processed_transcript MGP_WSBEiJ_T0047858.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 93170 139039 - MGP_WSBEiJ_P0047858 Crem protein_coding protein_coding MGP_WSBEiJ_T0047859.1 MGP_WSBEiJ_G0023390.1 mouse_genomes_project 18 93470 139024 - MGP_WSBEiJ_P0047859 Crem protein_coding protein_coding MGP_WSBEiJ_T0048395.1 MGP_WSBEiJ_G0023593.1 mouse_genomes_project 18 35332048 35340733 + MGP_WSBEiJ_P0048395 protein_coding protein_coding MGP_WSBEiJ_T0049032.1 MGP_WSBEiJ_G0023822.1 mouse_genomes_project 18 73409912 73430060 + MGP_WSBEiJ_P0049032 Mro protein_coding protein_coding MGP_WSBEiJ_T0049033.1 MGP_WSBEiJ_G0023822.1 mouse_genomes_project 18 73409914 73430464 + MGP_WSBEiJ_P0049033 Mro protein_coding protein_coding MGP_WSBEiJ_T0049034.1 MGP_WSBEiJ_G0023822.1 mouse_genomes_project 18 73409921 73432663 + Mro protein_coding processed_transcript MGP_WSBEiJ_T0049035.1 MGP_WSBEiJ_G0023822.1 mouse_genomes_project 18 73409929 73430060 + MGP_WSBEiJ_P0049035 Mro protein_coding protein_coding MGP_WSBEiJ_T0049036.1 MGP_WSBEiJ_G0023822.1 mouse_genomes_project 18 73414794 73421406 + Mro protein_coding retained_intron MGP_WSBEiJ_T0049037.1 MGP_WSBEiJ_G0023822.1 mouse_genomes_project 18 73414835 73423490 + MGP_WSBEiJ_P0049037 Mro protein_coding protein_coding MGP_WSBEiJ_T0048369.1 MGP_WSBEiJ_G0023574.1 mouse_genomes_project 18 34887304 35729278 + MGP_WSBEiJ_P0048369 Gm37388 protein_coding protein_coding MGP_WSBEiJ_T0048925.1 MGP_WSBEiJ_G0023805.1 mouse_genomes_project 18 67662031 67687025 + MGP_WSBEiJ_P0048925 Rnmt protein_coding protein_coding MGP_WSBEiJ_T0048926.1 MGP_WSBEiJ_G0023805.1 mouse_genomes_project 18 67662068 67671093 + MGP_WSBEiJ_P0048926 Rnmt protein_coding protein_coding MGP_WSBEiJ_T0048927.1 MGP_WSBEiJ_G0023805.1 mouse_genomes_project 18 67662074 67677123 + Rnmt protein_coding retained_intron MGP_WSBEiJ_T0048928.1 MGP_WSBEiJ_G0023805.1 mouse_genomes_project 18 67662076 67684079 + MGP_WSBEiJ_P0048928 Rnmt protein_coding protein_coding MGP_WSBEiJ_T0048929.1 MGP_WSBEiJ_G0023805.1 mouse_genomes_project 18 67662098 67673357 + MGP_WSBEiJ_P0048929 Rnmt protein_coding protein_coding MGP_WSBEiJ_T0048930.1 MGP_WSBEiJ_G0023805.1 mouse_genomes_project 18 67666668 67667868 + MGP_WSBEiJ_P0048930 Rnmt protein_coding protein_coding MGP_WSBEiJ_T0048931.1 MGP_WSBEiJ_G0023805.1 mouse_genomes_project 18 67679641 67681395 + Rnmt protein_coding retained_intron MGP_WSBEiJ_T0048932.1 MGP_WSBEiJ_G0023805.1 mouse_genomes_project 18 67681147 67687024 + Rnmt protein_coding processed_transcript MGP_WSBEiJ_T0011244.1 MGP_WSBEiJ_G0009401.1 mouse_genomes_project 18 10049370 10049683 + Gm26407 misc_RNA misc_RNA MGP_WSBEiJ_T0048105.1 MGP_WSBEiJ_G0023467.1 mouse_genomes_project 18 21411973 21428277 + MGP_WSBEiJ_P0048105 Zfp35 protein_coding protein_coding MGP_WSBEiJ_T0000972.1 MGP_WSBEiJ_G0000907.1 mouse_genomes_project 18 5793548 5795140 + TEC TEC MGP_WSBEiJ_T0048727.1 MGP_WSBEiJ_G0023730.1 mouse_genomes_project 18 59153216 59167536 + MGP_WSBEiJ_P0048727 F830016B08Rik protein_coding protein_coding MGP_WSBEiJ_T0049106.1 MGP_WSBEiJ_G0023843.1 mouse_genomes_project 18 76722149 76811003 + MGP_WSBEiJ_P0049106 Pias2 protein_coding protein_coding MGP_WSBEiJ_T0049107.1 MGP_WSBEiJ_G0023843.1 mouse_genomes_project 18 76722395 76811003 + MGP_WSBEiJ_P0049107 Pias2 protein_coding protein_coding MGP_WSBEiJ_T0049108.1 MGP_WSBEiJ_G0023843.1 mouse_genomes_project 18 76722395 76802234 + MGP_WSBEiJ_P0049108 Pias2 protein_coding protein_coding MGP_WSBEiJ_T0048045.1 MGP_WSBEiJ_G0023441.1 mouse_genomes_project 18 11924567 12043544 + MGP_WSBEiJ_P0048045 Taf4b protein_coding protein_coding MGP_WSBEiJ_T0048046.1 MGP_WSBEiJ_G0023441.1 mouse_genomes_project 18 11924989 12045295 + MGP_WSBEiJ_P0048046 Taf4b protein_coding unknown_likely_coding MGP_WSBEiJ_T0048379.1 MGP_WSBEiJ_G0023580.1 mouse_genomes_project 18 35035535 35081773 + MGP_WSBEiJ_P0048379 Pcdhac2 protein_coding protein_coding MGP_WSBEiJ_T0048165.1 MGP_WSBEiJ_G0023496.1 mouse_genomes_project 18 29821787 29841516 - MGP_WSBEiJ_P0048165 Proc protein_coding protein_coding MGP_WSBEiJ_T0048202.1 MGP_WSBEiJ_G0023510.1 mouse_genomes_project 18 32097363 32127784 - MGP_WSBEiJ_P0048202 Reep5 protein_coding protein_coding MGP_WSBEiJ_T0048409.1 MGP_WSBEiJ_G0023605.1 mouse_genomes_project 18 35545367 35737851 + MGP_WSBEiJ_P0048409 Pcdhga2 protein_coding protein_coding MGP_WSBEiJ_T0098031.1 MGP_WSBEiJ_G0036694.1 mouse_genomes_project 18 31935571 31935633 - Gm23411 snRNA snRNA MGP_WSBEiJ_T0048384.1 MGP_WSBEiJ_G0023584.1 mouse_genomes_project 18 35203188 35207670 + MGP_WSBEiJ_P0048384 Pcdhb4 protein_coding protein_coding MGP_WSBEiJ_T0048787.1 MGP_WSBEiJ_G0023750.1 mouse_genomes_project 18 60217059 60328394 - MGP_WSBEiJ_P0048787 Ppargc1b protein_coding protein_coding MGP_WSBEiJ_T0048788.1 MGP_WSBEiJ_G0023750.1 mouse_genomes_project 18 60217433 60328363 - MGP_WSBEiJ_P0048788 Ppargc1b protein_coding protein_coding MGP_WSBEiJ_T0048789.1 MGP_WSBEiJ_G0023750.1 mouse_genomes_project 18 60315475 60328363 - Ppargc1b protein_coding processed_transcript MGP_WSBEiJ_T0049240.1 MGP_WSBEiJ_G0023884.1 mouse_genomes_project 18 88777509 88866428 - protein_coding processed_transcript MGP_WSBEiJ_T0049241.1 MGP_WSBEiJ_G0023884.1 mouse_genomes_project 18 88780979 89003813 - protein_coding processed_transcript MGP_WSBEiJ_T0049242.1 MGP_WSBEiJ_G0023884.1 mouse_genomes_project 18 88973097 89003796 - MGP_WSBEiJ_P0049242 protein_coding protein_coding MGP_WSBEiJ_T0049243.1 MGP_WSBEiJ_G0023884.1 mouse_genomes_project 18 88976102 89003690 - MGP_WSBEiJ_P0049243 protein_coding protein_coding MGP_WSBEiJ_T0049244.1 MGP_WSBEiJ_G0023884.1 mouse_genomes_project 18 88976423 89003826 - MGP_WSBEiJ_P0049244 protein_coding protein_coding MGP_WSBEiJ_T0049245.1 MGP_WSBEiJ_G0023884.1 mouse_genomes_project 18 88979032 88997154 - MGP_WSBEiJ_P0049245 protein_coding protein_coding MGP_WSBEiJ_T0098026.1 MGP_WSBEiJ_G0036689.1 mouse_genomes_project 18 11790124 11790288 - Gm24924 snRNA snRNA MGP_WSBEiJ_T0048856.1 MGP_WSBEiJ_G0023778.1 mouse_genomes_project 18 64392851 64521336 - MGP_WSBEiJ_P0048856 Alpk2 protein_coding protein_coding MGP_WSBEiJ_T0048857.1 MGP_WSBEiJ_G0023778.1 mouse_genomes_project 18 64402022 64476044 - MGP_WSBEiJ_P0048857 Alpk2 protein_coding protein_coding MGP_WSBEiJ_T0048154.1 MGP_WSBEiJ_G0023487.1 mouse_genomes_project 18 29450414 29475041 + MGP_WSBEiJ_P0048154 Ammecr1l protein_coding protein_coding MGP_WSBEiJ_T0010090.1 MGP_WSBEiJ_G0008247.1 mouse_genomes_project 18 54880037 54880222 + Gm25476 miRNA miRNA MGP_WSBEiJ_T0048211.1 MGP_WSBEiJ_G0023515.1 mouse_genomes_project 18 32341669 32361969 - MGP_WSBEiJ_P0048211 4933408B17Rik protein_coding protein_coding MGP_WSBEiJ_T0048212.1 MGP_WSBEiJ_G0023515.1 mouse_genomes_project 18 32341768 32361846 - MGP_WSBEiJ_P0048212 4933408B17Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048573.1 MGP_WSBEiJ_G0023667.1 mouse_genomes_project 18 42348845 42356214 - MGP_WSBEiJ_P0048573 Spink11 protein_coding protein_coding MGP_WSBEiJ_T0048574.1 MGP_WSBEiJ_G0023667.1 mouse_genomes_project 18 42349255 42351146 - Spink11 protein_coding retained_intron MGP_WSBEiJ_T0047927.1 MGP_WSBEiJ_G0023403.1 mouse_genomes_project 18 3472781 3527729 + MGP_WSBEiJ_P0047927 4921524L21Rik protein_coding protein_coding MGP_WSBEiJ_T0011263.1 MGP_WSBEiJ_G0009420.1 mouse_genomes_project 18 64551078 64551407 + Gm22567 misc_RNA misc_RNA MGP_WSBEiJ_T0099294.1 MGP_WSBEiJ_G0037957.1 mouse_genomes_project 18 88003318 88003452 - Gm24987 snoRNA snoRNA MGP_WSBEiJ_T0010097.1 MGP_WSBEiJ_G0008254.1 mouse_genomes_project 18 59853725 59853793 + Mir6982 miRNA miRNA MGP_WSBEiJ_T0011250.1 MGP_WSBEiJ_G0009407.1 mouse_genomes_project 18 22208505 22208782 + Gm24294 misc_RNA misc_RNA MGP_WSBEiJ_T0049171.1 MGP_WSBEiJ_G0023865.1 mouse_genomes_project 18 80192169 80255337 - MGP_WSBEiJ_P0049171 Ctdp1 protein_coding protein_coding MGP_WSBEiJ_T0049172.1 MGP_WSBEiJ_G0023865.1 mouse_genomes_project 18 80192175 80225233 - MGP_WSBEiJ_P0049172 Ctdp1 protein_coding protein_coding MGP_WSBEiJ_T0049173.1 MGP_WSBEiJ_G0023865.1 mouse_genomes_project 18 80192946 80225162 - Ctdp1 protein_coding processed_transcript MGP_WSBEiJ_T0006943.1 MGP_WSBEiJ_G0005710.1 mouse_genomes_project 18 75417935 75419207 + 1700034B16Rik lincRNA lincRNA MGP_WSBEiJ_T0049038.1 MGP_WSBEiJ_G0023823.1 mouse_genomes_project 18 73475785 73531562 - MGP_WSBEiJ_P0049038 Mapk4 protein_coding protein_coding MGP_WSBEiJ_T0049039.1 MGP_WSBEiJ_G0023823.1 mouse_genomes_project 18 73475789 73619955 - MGP_WSBEiJ_P0049039 Mapk4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049040.1 MGP_WSBEiJ_G0023823.1 mouse_genomes_project 18 73521811 73620922 - Mapk4 protein_coding processed_transcript MGP_WSBEiJ_T0048615.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45454029 45501204 - MGP_WSBEiJ_P0048615 Sema6a protein_coding protein_coding MGP_WSBEiJ_T0048616.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45463668 45594754 - MGP_WSBEiJ_P0048616 Sema6a protein_coding protein_coding MGP_WSBEiJ_T0048617.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45463669 45594792 - MGP_WSBEiJ_P0048617 Sema6a protein_coding protein_coding MGP_WSBEiJ_T0048618.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45466465 45594370 - MGP_WSBEiJ_P0048618 Sema6a protein_coding protein_coding MGP_WSBEiJ_T0048619.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45466467 45594372 - MGP_WSBEiJ_P0048619 Sema6a protein_coding protein_coding MGP_WSBEiJ_T0048620.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45467405 45559336 - MGP_WSBEiJ_P0048620 Sema6a protein_coding protein_coding MGP_WSBEiJ_T0048621.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45495650 45594792 - Sema6a protein_coding retained_intron MGP_WSBEiJ_T0048622.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45495665 45594794 - Sema6a protein_coding retained_intron MGP_WSBEiJ_T0048623.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45510542 45559314 - MGP_WSBEiJ_P0048623 Sema6a protein_coding protein_coding MGP_WSBEiJ_T0048624.1 MGP_WSBEiJ_G0023688.1 mouse_genomes_project 18 45522323 45594192 - Sema6a protein_coding retained_intron MGP_WSBEiJ_T0006934.1 MGP_WSBEiJ_G0005703.1 mouse_genomes_project 18 60588701 60604998 - Carmn lincRNA lincRNA MGP_WSBEiJ_T0006935.1 MGP_WSBEiJ_G0005703.1 mouse_genomes_project 18 60590050 60605045 - Carmn lincRNA lincRNA MGP_WSBEiJ_T0047923.1 MGP_WSBEiJ_G0023402.1 mouse_genomes_project 18 3303732 3385086 - MGP_WSBEiJ_P0047923 Epc1 protein_coding protein_coding MGP_WSBEiJ_T0047924.1 MGP_WSBEiJ_G0023402.1 mouse_genomes_project 18 3303734 3359788 - MGP_WSBEiJ_P0047924 Epc1 protein_coding protein_coding MGP_WSBEiJ_T0047925.1 MGP_WSBEiJ_G0023402.1 mouse_genomes_project 18 3307373 3309676 - MGP_WSBEiJ_P0047925 Epc1 protein_coding protein_coding MGP_WSBEiJ_T0047926.1 MGP_WSBEiJ_G0023402.1 mouse_genomes_project 18 3358091 3359788 - MGP_WSBEiJ_P0047926 Epc1 protein_coding protein_coding MGP_WSBEiJ_T0048907.1 MGP_WSBEiJ_G0023792.1 mouse_genomes_project 18 66562574 66593635 + MGP_WSBEiJ_P0048907 Impa2 protein_coding protein_coding MGP_WSBEiJ_T0049182.1 MGP_WSBEiJ_G0023868.1 mouse_genomes_project 18 80769143 80791597 - MGP_WSBEiJ_P0049182 Sall3 protein_coding protein_coding MGP_WSBEiJ_T0100044.1 MGP_WSBEiJ_G0038669.1 mouse_genomes_project 18 34971528 34973269 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100045.1 MGP_WSBEiJ_G0038669.1 mouse_genomes_project 18 34973036 34973957 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0048759.1 MGP_WSBEiJ_G0023740.1 mouse_genomes_project 18 59702372 59739442 - MGP_WSBEiJ_P0048759 Tcof1 protein_coding protein_coding MGP_WSBEiJ_T0048760.1 MGP_WSBEiJ_G0023740.1 mouse_genomes_project 18 59702372 59739400 - MGP_WSBEiJ_P0048760 Tcof1 protein_coding protein_coding MGP_WSBEiJ_T0048761.1 MGP_WSBEiJ_G0023740.1 mouse_genomes_project 18 59704566 59739430 - MGP_WSBEiJ_P0048761 Tcof1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048762.1 MGP_WSBEiJ_G0023740.1 mouse_genomes_project 18 59706599 59739389 - MGP_WSBEiJ_P0048762 Tcof1 protein_coding protein_coding MGP_WSBEiJ_T0048763.1 MGP_WSBEiJ_G0023740.1 mouse_genomes_project 18 59716556 59717517 - Tcof1 protein_coding retained_intron MGP_WSBEiJ_T0048764.1 MGP_WSBEiJ_G0023740.1 mouse_genomes_project 18 59726582 59738917 - MGP_WSBEiJ_P0048764 Tcof1 protein_coding protein_coding MGP_WSBEiJ_T0048773.1 MGP_WSBEiJ_G0023743.1 mouse_genomes_project 18 59894928 59913765 - MGP_WSBEiJ_P0048773 Slc6a7 protein_coding protein_coding MGP_WSBEiJ_T0049174.1 MGP_WSBEiJ_G0023866.1 mouse_genomes_project 18 80388996 80496949 - MGP_WSBEiJ_P0049174 Nfatc1 protein_coding protein_coding MGP_WSBEiJ_T0049175.1 MGP_WSBEiJ_G0023866.1 mouse_genomes_project 18 80388996 80492046 - MGP_WSBEiJ_P0049175 Nfatc1 protein_coding protein_coding MGP_WSBEiJ_T0049176.1 MGP_WSBEiJ_G0023866.1 mouse_genomes_project 18 80388996 80496949 - MGP_WSBEiJ_P0049176 Nfatc1 protein_coding protein_coding MGP_WSBEiJ_T0049177.1 MGP_WSBEiJ_G0023866.1 mouse_genomes_project 18 80430234 80492046 - MGP_WSBEiJ_P0049177 Nfatc1 protein_coding protein_coding MGP_WSBEiJ_T0048814.1 MGP_WSBEiJ_G0023761.1 mouse_genomes_project 18 61292082 61440502 + MGP_WSBEiJ_P0048814 Htr4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049137.1 MGP_WSBEiJ_G0023855.1 mouse_genomes_project 18 77848723 77913203 - MGP_WSBEiJ_P0049137 Slc14a2 protein_coding protein_coding MGP_WSBEiJ_T0049138.1 MGP_WSBEiJ_G0023855.1 mouse_genomes_project 18 77886876 77910547 - MGP_WSBEiJ_P0049138 Slc14a2 protein_coding protein_coding MGP_WSBEiJ_T0097008.1 MGP_WSBEiJ_G0035689.1 mouse_genomes_project 18 68592142 68592276 - Gm23536 rRNA rRNA MGP_WSBEiJ_T0049131.1 MGP_WSBEiJ_G0023851.1 mouse_genomes_project 18 77512522 77608635 + MGP_WSBEiJ_P0049131 Pstpip2 protein_coding protein_coding MGP_WSBEiJ_T0047869.1 MGP_WSBEiJ_G0023394.1 mouse_genomes_project 18 1175592 1197166 - MGP_WSBEiJ_P0047869 Map3k8 protein_coding protein_coding MGP_WSBEiJ_T0047870.1 MGP_WSBEiJ_G0023394.1 mouse_genomes_project 18 1175605 1197170 - MGP_WSBEiJ_P0047870 Map3k8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047871.1 MGP_WSBEiJ_G0023394.1 mouse_genomes_project 18 1175606 1180579 - Map3k8 protein_coding processed_transcript MGP_WSBEiJ_T0047872.1 MGP_WSBEiJ_G0023394.1 mouse_genomes_project 18 1178128 1179332 - Map3k8 protein_coding retained_intron MGP_WSBEiJ_T0047873.1 MGP_WSBEiJ_G0023394.1 mouse_genomes_project 18 1191723 1197228 - Map3k8 protein_coding retained_intron MGP_WSBEiJ_T0048670.1 MGP_WSBEiJ_G0023704.1 mouse_genomes_project 18 51743460 51891251 + MGP_WSBEiJ_P0048670 Snx24 protein_coding protein_coding MGP_WSBEiJ_T0048671.1 MGP_WSBEiJ_G0023704.1 mouse_genomes_project 18 51743567 51891251 + MGP_WSBEiJ_P0048671 Snx24 protein_coding protein_coding MGP_WSBEiJ_T0011249.1 MGP_WSBEiJ_G0009406.1 mouse_genomes_project 18 18680768 18680878 + Gm24372 misc_RNA misc_RNA MGP_WSBEiJ_T0006941.1 MGP_WSBEiJ_G0005708.1 mouse_genomes_project 18 73572531 73574731 + D730045A05Rik lincRNA lincRNA MGP_WSBEiJ_T0048064.1 MGP_WSBEiJ_G0023451.1 mouse_genomes_project 18 17892548 17942570 + MGP_WSBEiJ_P0048064 Dsg2 protein_coding protein_coding MGP_WSBEiJ_T0048065.1 MGP_WSBEiJ_G0023451.1 mouse_genomes_project 18 17892629 17921229 + MGP_WSBEiJ_P0048065 Dsg2 protein_coding protein_coding MGP_WSBEiJ_T0048066.1 MGP_WSBEiJ_G0023451.1 mouse_genomes_project 18 17892720 17918592 + MGP_WSBEiJ_P0048066 Dsg2 protein_coding protein_coding MGP_WSBEiJ_T0048785.1 MGP_WSBEiJ_G0023749.1 mouse_genomes_project 18 60129839 60208848 + MGP_WSBEiJ_P0048785 Pde6a protein_coding protein_coding MGP_WSBEiJ_T0048786.1 MGP_WSBEiJ_G0023749.1 mouse_genomes_project 18 60194292 60208848 + MGP_WSBEiJ_P0048786 Pde6a protein_coding protein_coding MGP_WSBEiJ_T0048353.1 MGP_WSBEiJ_G0023564.1 mouse_genomes_project 18 34718022 34723762 + MGP_WSBEiJ_P0048353 Zmat2 protein_coding protein_coding MGP_WSBEiJ_T0100046.1 MGP_WSBEiJ_G0038670.1 mouse_genomes_project 18 35528339 35528814 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100047.1 MGP_WSBEiJ_G0038670.1 mouse_genomes_project 18 35528659 35530079 - transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0048432.1 MGP_WSBEiJ_G0023621.1 mouse_genomes_project 18 35650639 35737854 + MGP_WSBEiJ_P0048432 Pcdhga12 protein_coding protein_coding MGP_WSBEiJ_T0048433.1 MGP_WSBEiJ_G0023621.1 mouse_genomes_project 18 35650834 35655158 + Pcdhga12 protein_coding retained_intron MGP_WSBEiJ_T0006908.1 MGP_WSBEiJ_G0005683.1 mouse_genomes_project 18 29472199 29480810 - Gm26533 lincRNA lincRNA MGP_WSBEiJ_T0049117.1 MGP_WSBEiJ_G0023847.1 mouse_genomes_project 18 77140153 77257651 - MGP_WSBEiJ_P0049117 Rnf165 protein_coding protein_coding MGP_WSBEiJ_T0049118.1 MGP_WSBEiJ_G0023847.1 mouse_genomes_project 18 77147482 77179135 - MGP_WSBEiJ_P0049118 Rnf165 protein_coding protein_coding MGP_WSBEiJ_T0049119.1 MGP_WSBEiJ_G0023847.1 mouse_genomes_project 18 77148045 77154793 - Rnf165 protein_coding retained_intron MGP_WSBEiJ_T0049120.1 MGP_WSBEiJ_G0023847.1 mouse_genomes_project 18 77154381 77257565 - MGP_WSBEiJ_P0049120 Rnf165 protein_coding protein_coding MGP_WSBEiJ_T0049121.1 MGP_WSBEiJ_G0023847.1 mouse_genomes_project 18 77155971 77196843 - Rnf165 protein_coding processed_transcript MGP_WSBEiJ_T0049122.1 MGP_WSBEiJ_G0023847.1 mouse_genomes_project 18 77254619 77257124 - Rnf165 protein_coding retained_intron MGP_WSBEiJ_T0049123.1 MGP_WSBEiJ_G0023847.1 mouse_genomes_project 18 77255656 77257620 - MGP_WSBEiJ_P0049123 Rnf165 protein_coding protein_coding MGP_WSBEiJ_T0048016.1 MGP_WSBEiJ_G0023432.1 mouse_genomes_project 18 9707328 9756653 + Ttc39c protein_coding retained_intron MGP_WSBEiJ_T0048017.1 MGP_WSBEiJ_G0023432.1 mouse_genomes_project 18 9707870 9807377 + MGP_WSBEiJ_P0048017 Ttc39c protein_coding protein_coding MGP_WSBEiJ_T0048018.1 MGP_WSBEiJ_G0023432.1 mouse_genomes_project 18 9805332 9807444 + Ttc39c protein_coding retained_intron MGP_WSBEiJ_T0012986.1 MGP_WSBEiJ_G0011116.1 mouse_genomes_project 18 4788466 4789199 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010093.1 MGP_WSBEiJ_G0008250.1 mouse_genomes_project 18 58370246 58370352 + Mir6355 miRNA miRNA MGP_WSBEiJ_T0048234.1 MGP_WSBEiJ_G0023521.1 mouse_genomes_project 18 32541979 32556820 + MGP_WSBEiJ_P0048234 Fam53c protein_coding protein_coding MGP_WSBEiJ_T0048235.1 MGP_WSBEiJ_G0023521.1 mouse_genomes_project 18 32542629 32556798 + MGP_WSBEiJ_P0048235 Fam53c protein_coding protein_coding MGP_WSBEiJ_T0048383.1 MGP_WSBEiJ_G0023583.1 mouse_genomes_project 18 35196627 35200309 + MGP_WSBEiJ_P0048383 Pcdhb3 protein_coding protein_coding MGP_WSBEiJ_T0048551.1 MGP_WSBEiJ_G0023655.1 mouse_genomes_project 18 41342237 41460837 + MGP_WSBEiJ_P0048551 Stk32a protein_coding protein_coding MGP_WSBEiJ_T0048564.1 MGP_WSBEiJ_G0023661.1 mouse_genomes_project 18 42123116 42187530 + MGP_WSBEiJ_P0048564 Spink5 protein_coding protein_coding MGP_WSBEiJ_T0048565.1 MGP_WSBEiJ_G0023661.1 mouse_genomes_project 18 42126045 42151985 + MGP_WSBEiJ_P0048565 Spink5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0098036.1 MGP_WSBEiJ_G0036699.1 mouse_genomes_project 18 47884359 47884513 - Gm25440 snRNA snRNA MGP_WSBEiJ_T0048625.1 MGP_WSBEiJ_G0023689.1 mouse_genomes_project 18 47995737 48061398 - MGP_WSBEiJ_P0048625 Dtwd2 protein_coding protein_coding MGP_WSBEiJ_T0048626.1 MGP_WSBEiJ_G0023689.1 mouse_genomes_project 18 47996220 48061398 - MGP_WSBEiJ_P0048626 Dtwd2 protein_coding protein_coding MGP_WSBEiJ_T0048627.1 MGP_WSBEiJ_G0023689.1 mouse_genomes_project 18 47996953 48037856 - Dtwd2 protein_coding processed_transcript MGP_WSBEiJ_T0048802.1 MGP_WSBEiJ_G0023754.1 mouse_genomes_project 18 60638547 60649901 - MGP_WSBEiJ_P0048802 Pcyox1l protein_coding protein_coding MGP_WSBEiJ_T0048803.1 MGP_WSBEiJ_G0023754.1 mouse_genomes_project 18 60641179 60649879 - MGP_WSBEiJ_P0048803 Pcyox1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048804.1 MGP_WSBEiJ_G0023754.1 mouse_genomes_project 18 60644943 60649901 - Pcyox1l protein_coding retained_intron MGP_WSBEiJ_T0048474.1 MGP_WSBEiJ_G0023629.1 mouse_genomes_project 18 35870593 35898139 - MGP_WSBEiJ_P0048474 Arap3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048074.1 MGP_WSBEiJ_G0023457.1 mouse_genomes_project 18 18451187 18480780 + MGP_WSBEiJ_P0048074 Mep1b protein_coding protein_coding MGP_WSBEiJ_T0048356.1 MGP_WSBEiJ_G0023566.1 mouse_genomes_project 18 34848331 35081773 + MGP_WSBEiJ_P0048356 Pcdha2 protein_coding protein_coding MGP_WSBEiJ_T0048357.1 MGP_WSBEiJ_G0023566.1 mouse_genomes_project 18 34848350 35081504 + MGP_WSBEiJ_P0048357 Pcdha2 protein_coding protein_coding MGP_WSBEiJ_T0047929.1 MGP_WSBEiJ_G0023405.1 mouse_genomes_project 18 3733854 3757766 - Mkx protein_coding processed_transcript MGP_WSBEiJ_T0047930.1 MGP_WSBEiJ_G0023405.1 mouse_genomes_project 18 3756108 3832173 - MGP_WSBEiJ_P0047930 Mkx protein_coding protein_coding MGP_WSBEiJ_T0047931.1 MGP_WSBEiJ_G0023405.1 mouse_genomes_project 18 3758096 3820410 - Mkx protein_coding retained_intron MGP_WSBEiJ_T0047932.1 MGP_WSBEiJ_G0023405.1 mouse_genomes_project 18 3828059 3831175 - Mkx protein_coding processed_transcript MGP_WSBEiJ_T0047933.1 MGP_WSBEiJ_G0023405.1 mouse_genomes_project 18 3829727 3832119 - Mkx protein_coding retained_intron MGP_WSBEiJ_T0048072.1 MGP_WSBEiJ_G0023455.1 mouse_genomes_project 18 18323057 18347823 + MGP_WSBEiJ_P0048072 Rnf125 protein_coding protein_coding MGP_WSBEiJ_T0048335.1 MGP_WSBEiJ_G0023555.1 mouse_genomes_project 18 34598488 34611366 - MGP_WSBEiJ_P0048335 E230025N22Rik protein_coding protein_coding MGP_WSBEiJ_T0048901.1 MGP_WSBEiJ_G0023788.1 mouse_genomes_project 18 65656048 65663889 + MGP_WSBEiJ_P0048901 Pmaip1 protein_coding protein_coding MGP_WSBEiJ_T0048402.1 MGP_WSBEiJ_G0023600.1 mouse_genomes_project 18 35394307 35399012 + MGP_WSBEiJ_P0048402 Pcdhb21 protein_coding protein_coding MGP_WSBEiJ_T0006940.1 MGP_WSBEiJ_G0005707.1 mouse_genomes_project 18 67106427 67107573 - Gm26910 lincRNA lincRNA MGP_WSBEiJ_T0048185.1 MGP_WSBEiJ_G0023506.1 mouse_genomes_project 18 31170069 31179131 + MGP_WSBEiJ_P0048185 Gm10549 protein_coding protein_coding MGP_WSBEiJ_T0099274.1 MGP_WSBEiJ_G0037937.1 mouse_genomes_project 18 32736465 32736532 - Gm22200 snoRNA snoRNA MGP_WSBEiJ_T0013015.1 MGP_WSBEiJ_G0011145.1 mouse_genomes_project 18 50914679 50915571 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013004.1 MGP_WSBEiJ_G0011134.1 mouse_genomes_project 18 35318475 35319346 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0000974.1 MGP_WSBEiJ_G0000909.1 mouse_genomes_project 18 42278385 42278558 + TEC TEC MGP_WSBEiJ_T0017062.1 MGP_WSBEiJ_G0014792.1 mouse_genomes_project 18 84724978 84726749 - D030046N08Rik processed_transcript processed_transcript MGP_WSBEiJ_T0006899.1 MGP_WSBEiJ_G0005677.1 mouse_genomes_project 18 7599888 7605669 + 4930563E18Rik lincRNA lincRNA MGP_WSBEiJ_T0048057.1 MGP_WSBEiJ_G0023447.1 mouse_genomes_project 18 17279931 17308754 - MGP_WSBEiJ_P0048057 Dsc2 protein_coding protein_coding MGP_WSBEiJ_T0048058.1 MGP_WSBEiJ_G0023447.1 mouse_genomes_project 18 17279931 17308830 - MGP_WSBEiJ_P0048058 Dsc2 protein_coding protein_coding MGP_WSBEiJ_T0048059.1 MGP_WSBEiJ_G0023447.1 mouse_genomes_project 18 17280643 17287424 - MGP_WSBEiJ_P0048059 Dsc2 protein_coding protein_coding MGP_WSBEiJ_T0048060.1 MGP_WSBEiJ_G0023447.1 mouse_genomes_project 18 17280778 17308785 - MGP_WSBEiJ_P0048060 Dsc2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049041.1 MGP_WSBEiJ_G0023824.1 mouse_genomes_project 18 73620664 73621147 + MGP_WSBEiJ_P0049041 Gm9925 protein_coding protein_coding MGP_WSBEiJ_T0006926.1 MGP_WSBEiJ_G0005697.1 mouse_genomes_project 18 48110011 48125314 - 1700065O20Rik lincRNA lincRNA MGP_WSBEiJ_T0048464.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35855401 35858444 - Fchsd1 protein_coding retained_intron MGP_WSBEiJ_T0048465.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35855404 35867747 - MGP_WSBEiJ_P0048465 Fchsd1 protein_coding protein_coding MGP_WSBEiJ_T0048466.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35860936 35862034 - Fchsd1 protein_coding retained_intron MGP_WSBEiJ_T0048467.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35863630 35867742 - MGP_WSBEiJ_P0048467 Fchsd1 protein_coding protein_coding MGP_WSBEiJ_T0048468.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35863668 35865722 - Fchsd1 protein_coding retained_intron MGP_WSBEiJ_T0048469.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35865590 35866025 - Fchsd1 protein_coding retained_intron MGP_WSBEiJ_T0048470.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35865611 35867742 - MGP_WSBEiJ_P0048470 Fchsd1 protein_coding protein_coding MGP_WSBEiJ_T0048471.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35865612 35867730 - Fchsd1 protein_coding retained_intron MGP_WSBEiJ_T0048472.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35865777 35867742 - MGP_WSBEiJ_P0048472 Fchsd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048473.1 MGP_WSBEiJ_G0023628.1 mouse_genomes_project 18 35865805 35867501 - Fchsd1 protein_coding retained_intron MGP_WSBEiJ_T0003742.1 MGP_WSBEiJ_G0003365.1 mouse_genomes_project 18 42833471 42847987 + A930012L18Rik antisense antisense MGP_WSBEiJ_T0003743.1 MGP_WSBEiJ_G0003365.1 mouse_genomes_project 18 42833909 42844299 + A930012L18Rik antisense antisense MGP_WSBEiJ_T0048486.1 MGP_WSBEiJ_G0023634.1 mouse_genomes_project 18 36243766 36257615 - MGP_WSBEiJ_P0048486 Gnpda1 protein_coding protein_coding MGP_WSBEiJ_T0048487.1 MGP_WSBEiJ_G0023634.1 mouse_genomes_project 18 36244890 36250685 - Gnpda1 protein_coding processed_transcript MGP_WSBEiJ_T0048488.1 MGP_WSBEiJ_G0023634.1 mouse_genomes_project 18 36245079 36257589 - MGP_WSBEiJ_P0048488 Gnpda1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048489.1 MGP_WSBEiJ_G0023634.1 mouse_genomes_project 18 36251711 36253688 - Gnpda1 protein_coding retained_intron MGP_WSBEiJ_T0048490.1 MGP_WSBEiJ_G0023634.1 mouse_genomes_project 18 36251803 36257521 - MGP_WSBEiJ_P0048490 Gnpda1 protein_coding protein_coding MGP_WSBEiJ_T0048913.1 MGP_WSBEiJ_G0023798.1 mouse_genomes_project 18 66935266 66959962 - MGP_WSBEiJ_P0048913 Cep76 protein_coding protein_coding MGP_WSBEiJ_T0003757.1 MGP_WSBEiJ_G0003372.1 mouse_genomes_project 18 69429781 69432469 + 4930448D08Rik antisense antisense MGP_WSBEiJ_T0098037.1 MGP_WSBEiJ_G0036700.1 mouse_genomes_project 18 49638036 49638143 - Gm25739 snRNA snRNA MGP_WSBEiJ_T0048109.1 MGP_WSBEiJ_G0023469.1 mouse_genomes_project 18 21531924 21549429 - MGP_WSBEiJ_P0048109 Ino80c protein_coding protein_coding MGP_WSBEiJ_T0048110.1 MGP_WSBEiJ_G0023469.1 mouse_genomes_project 18 21531930 21549581 - MGP_WSBEiJ_P0048110 Ino80c protein_coding protein_coding MGP_WSBEiJ_T0048111.1 MGP_WSBEiJ_G0023469.1 mouse_genomes_project 18 21533584 21549463 - MGP_WSBEiJ_P0048111 Ino80c protein_coding protein_coding MGP_WSBEiJ_T0010070.1 MGP_WSBEiJ_G0008227.1 mouse_genomes_project 18 5560656 5560760 - Gm26119 miRNA miRNA MGP_WSBEiJ_T0006949.1 MGP_WSBEiJ_G0005715.1 mouse_genomes_project 18 83035213 83036546 - 1700095A13Rik lincRNA lincRNA MGP_WSBEiJ_T0048716.1 MGP_WSBEiJ_G0023725.1 mouse_genomes_project 18 57606367 57824236 + MGP_WSBEiJ_P0048716 Adamts19 protein_coding protein_coding MGP_WSBEiJ_T0003719.1 MGP_WSBEiJ_G0003345.1 mouse_genomes_project 18 7679987 7684148 - Mir133a-1hg antisense antisense MGP_WSBEiJ_T0048095.1 MGP_WSBEiJ_G0023464.1 mouse_genomes_project 18 21182838 21205163 + Mapre2 protein_coding retained_intron MGP_WSBEiJ_T0048096.1 MGP_WSBEiJ_G0023464.1 mouse_genomes_project 18 21182844 21308034 + MGP_WSBEiJ_P0048096 Mapre2 protein_coding protein_coding MGP_WSBEiJ_T0048097.1 MGP_WSBEiJ_G0023464.1 mouse_genomes_project 18 21182898 21284151 + MGP_WSBEiJ_P0048097 Mapre2 protein_coding protein_coding MGP_WSBEiJ_T0048098.1 MGP_WSBEiJ_G0023464.1 mouse_genomes_project 18 21184224 21316701 + MGP_WSBEiJ_P0048098 Mapre2 protein_coding protein_coding MGP_WSBEiJ_T0048099.1 MGP_WSBEiJ_G0023464.1 mouse_genomes_project 18 21184247 21221553 + Mapre2 protein_coding processed_transcript MGP_WSBEiJ_T0048100.1 MGP_WSBEiJ_G0023464.1 mouse_genomes_project 18 21227591 21257270 + Mapre2 protein_coding retained_intron MGP_WSBEiJ_T0048101.1 MGP_WSBEiJ_G0023464.1 mouse_genomes_project 18 21227674 21318199 + MGP_WSBEiJ_P0048101 Mapre2 protein_coding protein_coding MGP_WSBEiJ_T0048102.1 MGP_WSBEiJ_G0023464.1 mouse_genomes_project 18 21227674 21315268 + MGP_WSBEiJ_P0048102 Mapre2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0098047.1 MGP_WSBEiJ_G0036710.1 mouse_genomes_project 18 63818407 63818469 + Gm23016 snRNA snRNA MGP_WSBEiJ_T0097007.1 MGP_WSBEiJ_G0035688.1 mouse_genomes_project 18 62541984 62542104 + Gm22560 rRNA rRNA MGP_WSBEiJ_T0048370.1 MGP_WSBEiJ_G0023575.1 mouse_genomes_project 18 34907068 35081773 + MGP_WSBEiJ_P0048370 Pcdha9 protein_coding protein_coding MGP_WSBEiJ_T0098024.1 MGP_WSBEiJ_G0036687.1 mouse_genomes_project 18 6621068 6621171 - Gm23350 snRNA snRNA MGP_WSBEiJ_T0048418.1 MGP_WSBEiJ_G0023611.1 mouse_genomes_project 18 35589080 35737854 + MGP_WSBEiJ_P0048418 Pcdhga6 protein_coding protein_coding MGP_WSBEiJ_T0049156.1 MGP_WSBEiJ_G0023862.1 mouse_genomes_project 18 80003335 80022912 - MGP_WSBEiJ_P0049156 Hsbp1l1 protein_coding protein_coding MGP_WSBEiJ_T0048672.1 MGP_WSBEiJ_G0023705.1 mouse_genomes_project 18 51907991 51924792 - MGP_WSBEiJ_P0048672 Ppic protein_coding protein_coding MGP_WSBEiJ_T0011246.1 MGP_WSBEiJ_G0009403.1 mouse_genomes_project 18 13391894 13392244 - Gm24385 misc_RNA misc_RNA MGP_WSBEiJ_T0048160.1 MGP_WSBEiJ_G0023492.1 mouse_genomes_project 18 29630581 29657692 + MGP_WSBEiJ_P0048160 Lims2 protein_coding protein_coding MGP_WSBEiJ_T0048162.1 MGP_WSBEiJ_G0023492.1 mouse_genomes_project 18 29653164 29657063 + MGP_WSBEiJ_P0048162 Lims2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0017037.1 MGP_WSBEiJ_G0014783.1 mouse_genomes_project 18 36117180 36137736 + 2010320O07Rik processed_transcript processed_transcript MGP_WSBEiJ_T0098056.1 MGP_WSBEiJ_G0036719.1 mouse_genomes_project 18 84750182 84750338 - Gm25005 snRNA snRNA MGP_WSBEiJ_T0048994.1 MGP_WSBEiJ_G0023810.1 mouse_genomes_project 18 69380523 69401950 + Ccdc68 protein_coding processed_transcript MGP_WSBEiJ_T0048995.1 MGP_WSBEiJ_G0023810.1 mouse_genomes_project 18 69380667 69394953 + Ccdc68 protein_coding processed_transcript MGP_WSBEiJ_T0048996.1 MGP_WSBEiJ_G0023810.1 mouse_genomes_project 18 69380673 69429589 + MGP_WSBEiJ_P0048996 Ccdc68 protein_coding protein_coding MGP_WSBEiJ_T0048997.1 MGP_WSBEiJ_G0023810.1 mouse_genomes_project 18 69380679 69429140 + MGP_WSBEiJ_P0048997 Ccdc68 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048363.1 MGP_WSBEiJ_G0023570.1 mouse_genomes_project 18 34871115 35081773 + MGP_WSBEiJ_P0048363 Pcdha5 protein_coding protein_coding MGP_WSBEiJ_T0048413.1 MGP_WSBEiJ_G0023608.1 mouse_genomes_project 18 35563375 35737854 + MGP_WSBEiJ_P0048413 Pcdhga4 protein_coding protein_coding MGP_WSBEiJ_T0048414.1 MGP_WSBEiJ_G0023608.1 mouse_genomes_project 18 35565049 35565945 + MGP_WSBEiJ_P0048414 Pcdhga4 protein_coding protein_coding MGP_WSBEiJ_T0047968.1 MGP_WSBEiJ_G0023418.1 mouse_genomes_project 18 7210228 7389477 + Greb1l protein_coding retained_intron MGP_WSBEiJ_T0047969.1 MGP_WSBEiJ_G0023418.1 mouse_genomes_project 18 7210230 7450202 + MGP_WSBEiJ_P0047969 Greb1l protein_coding protein_coding MGP_WSBEiJ_T0047970.1 MGP_WSBEiJ_G0023418.1 mouse_genomes_project 18 7344091 7425684 + MGP_WSBEiJ_P0047970 Greb1l protein_coding protein_coding MGP_WSBEiJ_T0047971.1 MGP_WSBEiJ_G0023418.1 mouse_genomes_project 18 7396349 7402455 + Greb1l protein_coding retained_intron MGP_WSBEiJ_T0047972.1 MGP_WSBEiJ_G0023418.1 mouse_genomes_project 18 7397657 7440372 + MGP_WSBEiJ_P0047972 Greb1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0047973.1 MGP_WSBEiJ_G0023418.1 mouse_genomes_project 18 7440453 7446096 + Greb1l protein_coding processed_transcript MGP_WSBEiJ_T0048158.1 MGP_WSBEiJ_G0023490.1 mouse_genomes_project 18 29512959 29513511 - MGP_WSBEiJ_P0048158 Gm6665 protein_coding protein_coding MGP_WSBEiJ_T0098055.1 MGP_WSBEiJ_G0036718.1 mouse_genomes_project 18 83280708 83280874 - Gm24720 snRNA snRNA MGP_WSBEiJ_T0049235.1 MGP_WSBEiJ_G0023882.1 mouse_genomes_project 18 86413822 86522342 + MGP_WSBEiJ_P0049235 Neto1 protein_coding protein_coding MGP_WSBEiJ_T0048078.1 MGP_WSBEiJ_G0023460.1 mouse_genomes_project 18 19198667 19580286 - MGP_WSBEiJ_P0048078 Ccdc178 protein_coding protein_coding MGP_WSBEiJ_T0048079.1 MGP_WSBEiJ_G0023460.1 mouse_genomes_project 18 19199068 19575421 - MGP_WSBEiJ_P0048079 Ccdc178 protein_coding protein_coding MGP_WSBEiJ_T0048726.1 MGP_WSBEiJ_G0023729.1 mouse_genomes_project 18 59101137 59106711 - MGP_WSBEiJ_P0048726 Gm4841 protein_coding protein_coding MGP_WSBEiJ_T0048813.1 MGP_WSBEiJ_G0023760.1 mouse_genomes_project 18 61156016 61160297 + MGP_WSBEiJ_P0048813 Gm9949 protein_coding protein_coding MGP_WSBEiJ_T0048159.1 MGP_WSBEiJ_G0023491.1 mouse_genomes_project 18 29606361 29609172 - MGP_WSBEiJ_P0048159 Sft2d3 protein_coding protein_coding MGP_WSBEiJ_T0098022.1 MGP_WSBEiJ_G0036685.1 mouse_genomes_project 18 594365 594429 - Gm23643 snRNA snRNA MGP_WSBEiJ_T0048791.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60490658 60525388 + MGP_WSBEiJ_P0048791 Csnk1a1 protein_coding protein_coding MGP_WSBEiJ_T0048792.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60490697 60523633 + MGP_WSBEiJ_P0048792 Csnk1a1 protein_coding protein_coding MGP_WSBEiJ_T0048793.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60490702 60517449 + MGP_WSBEiJ_P0048793 Csnk1a1 protein_coding protein_coding MGP_WSBEiJ_T0048794.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60490702 60520964 + MGP_WSBEiJ_P0048794 Csnk1a1 protein_coding protein_coding MGP_WSBEiJ_T0048795.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60490712 60517595 + MGP_WSBEiJ_P0048795 Csnk1a1 protein_coding protein_coding MGP_WSBEiJ_T0048796.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60490719 60493626 + Csnk1a1 protein_coding retained_intron MGP_WSBEiJ_T0048797.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60490723 60523511 + MGP_WSBEiJ_P0048797 Csnk1a1 protein_coding protein_coding MGP_WSBEiJ_T0048798.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60491073 60522861 + MGP_WSBEiJ_P0048798 Csnk1a1 protein_coding protein_coding MGP_WSBEiJ_T0048799.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60510864 60517451 + MGP_WSBEiJ_P0048799 Csnk1a1 protein_coding protein_coding MGP_WSBEiJ_T0048800.1 MGP_WSBEiJ_G0023752.1 mouse_genomes_project 18 60518176 60521828 + Csnk1a1 protein_coding processed_transcript MGP_WSBEiJ_T0013021.1 MGP_WSBEiJ_G0011151.1 mouse_genomes_project 18 68682968 68683803 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0097010.1 MGP_WSBEiJ_G0035691.1 mouse_genomes_project 18 73060879 73061027 - n-R5-8s1 rRNA rRNA MGP_WSBEiJ_T0017044.1 MGP_WSBEiJ_G0014787.1 mouse_genomes_project 18 56226143 56256998 - 1700066O22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017045.1 MGP_WSBEiJ_G0014787.1 mouse_genomes_project 18 56229435 56256974 - 1700066O22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017047.1 MGP_WSBEiJ_G0014787.1 mouse_genomes_project 18 56239197 56256985 - 1700066O22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017048.1 MGP_WSBEiJ_G0014787.1 mouse_genomes_project 18 56239208 56256962 - 1700066O22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017049.1 MGP_WSBEiJ_G0014787.1 mouse_genomes_project 18 56253681 56256969 - 1700066O22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0049096.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76626374 76702183 - MGP_WSBEiJ_P0049096 Katnal2 protein_coding protein_coding MGP_WSBEiJ_T0049097.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76628076 76702245 - MGP_WSBEiJ_P0049097 Katnal2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049098.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76628076 76702202 - MGP_WSBEiJ_P0049098 Katnal2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049099.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76628084 76702202 - MGP_WSBEiJ_P0049099 Katnal2 protein_coding protein_coding MGP_WSBEiJ_T0049100.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76629377 76657715 - Katnal2 protein_coding processed_transcript MGP_WSBEiJ_T0049101.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76644099 76702255 - MGP_WSBEiJ_P0049101 Katnal2 protein_coding protein_coding MGP_WSBEiJ_T0049102.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76652631 76662867 - Katnal2 protein_coding processed_transcript MGP_WSBEiJ_T0049103.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76653373 76659045 - Katnal2 protein_coding retained_intron MGP_WSBEiJ_T0049104.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76660883 76702246 - MGP_WSBEiJ_P0049104 Katnal2 protein_coding protein_coding MGP_WSBEiJ_T0049105.1 MGP_WSBEiJ_G0023842.1 mouse_genomes_project 18 76661367 76702257 - MGP_WSBEiJ_P0049105 Katnal2 protein_coding protein_coding MGP_WSBEiJ_T0048268.1 MGP_WSBEiJ_G0023534.1 mouse_genomes_project 18 33448117 33463122 - MGP_WSBEiJ_P0048268 Slc23a1 protein_coding protein_coding MGP_WSBEiJ_T0048269.1 MGP_WSBEiJ_G0023534.1 mouse_genomes_project 18 33453886 33463074 - MGP_WSBEiJ_P0048269 Slc23a1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048270.1 MGP_WSBEiJ_G0023534.1 mouse_genomes_project 18 33454582 33457115 - Slc23a1 protein_coding processed_transcript MGP_WSBEiJ_T0048271.1 MGP_WSBEiJ_G0023534.1 mouse_genomes_project 18 33457332 33463114 - Slc23a1 protein_coding processed_transcript MGP_WSBEiJ_T0048290.1 MGP_WSBEiJ_G0023543.1 mouse_genomes_project 18 33687557 33719923 + MGP_WSBEiJ_P0048290 Cxxc5 protein_coding protein_coding MGP_WSBEiJ_T0099272.1 MGP_WSBEiJ_G0037935.1 mouse_genomes_project 18 31516790 31516922 + Gm23639 snoRNA snoRNA MGP_WSBEiJ_T0010071.1 MGP_WSBEiJ_G0008228.1 mouse_genomes_project 18 6693725 6693819 - Gm23637 miRNA miRNA MGP_WSBEiJ_T0048182.1 MGP_WSBEiJ_G0023505.1 mouse_genomes_project 18 31142750 31169549 - MGP_WSBEiJ_P0048182 Nrep protein_coding protein_coding MGP_WSBEiJ_T0048183.1 MGP_WSBEiJ_G0023505.1 mouse_genomes_project 18 31142750 31169936 - MGP_WSBEiJ_P0048183 Nrep protein_coding protein_coding MGP_WSBEiJ_T0048184.1 MGP_WSBEiJ_G0023505.1 mouse_genomes_project 18 31142750 31169653 - MGP_WSBEiJ_P0048184 Nrep protein_coding protein_coding MGP_WSBEiJ_T0012994.1 MGP_WSBEiJ_G0011124.1 mouse_genomes_project 18 18699861 18700169 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0047959.1 MGP_WSBEiJ_G0023415.1 mouse_genomes_project 18 6827931 6866545 + MGP_WSBEiJ_P0047959 Thoc1 protein_coding protein_coding MGP_WSBEiJ_T0013020.1 MGP_WSBEiJ_G0011150.1 mouse_genomes_project 18 59662196 59662608 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011252.1 MGP_WSBEiJ_G0009409.1 mouse_genomes_project 18 29999661 29999969 + Gm22325 misc_RNA misc_RNA MGP_WSBEiJ_T0048221.1 MGP_WSBEiJ_G0023517.1 mouse_genomes_project 18 32390396 32398465 + MGP_WSBEiJ_P0048221 Kif20a protein_coding unknown_likely_coding MGP_WSBEiJ_T0048222.1 MGP_WSBEiJ_G0023517.1 mouse_genomes_project 18 32390407 32398465 + MGP_WSBEiJ_P0048222 Kif20a protein_coding unknown_likely_coding MGP_WSBEiJ_T0006928.1 MGP_WSBEiJ_G0005699.1 mouse_genomes_project 18 53564776 53571024 + Gm26742 lincRNA lincRNA MGP_WSBEiJ_T0048138.1 MGP_WSBEiJ_G0023480.1 mouse_genomes_project 18 22957328 23244986 - MGP_WSBEiJ_P0048138 Celf4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0048139.1 MGP_WSBEiJ_G0023480.1 mouse_genomes_project 18 22957341 23245422 - MGP_WSBEiJ_P0048139 Celf4 protein_coding protein_coding MGP_WSBEiJ_T0048140.1 MGP_WSBEiJ_G0023480.1 mouse_genomes_project 18 22957341 23245422 - MGP_WSBEiJ_P0048140 Celf4 protein_coding protein_coding MGP_WSBEiJ_T0006913.1 MGP_WSBEiJ_G0005688.1 mouse_genomes_project 18 30642474 30665952 - 2310026I22Rik lincRNA lincRNA MGP_WSBEiJ_T0049047.1 MGP_WSBEiJ_G0023828.1 mouse_genomes_project 18 73845062 73927811 + MGP_WSBEiJ_P0049047 Cfap53 protein_coding protein_coding MGP_WSBEiJ_T0049048.1 MGP_WSBEiJ_G0023828.1 mouse_genomes_project 18 73845094 73927809 + MGP_WSBEiJ_P0049048 Cfap53 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049049.1 MGP_WSBEiJ_G0023828.1 mouse_genomes_project 18 73916808 73927754 + Cfap53 protein_coding processed_transcript MGP_WSBEiJ_T0100042.1 MGP_WSBEiJ_G0038668.1 mouse_genomes_project 18 31954169 31969033 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0100043.1 MGP_WSBEiJ_G0038668.1 mouse_genomes_project 18 31956193 31956465 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0096802.1 MGP_WSBEiJ_G0035483.1 mouse_genomes_project 18 77425885 77427125 + pseudogene pseudogene MGP_WSBEiJ_T0013019.1 MGP_WSBEiJ_G0011149.1 mouse_genomes_project 18 59039103 59040319 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0017052.1 MGP_WSBEiJ_G0014788.1 mouse_genomes_project 18 65479141 65507389 + Gm15958 processed_transcript processed_transcript MGP_WSBEiJ_T0017053.1 MGP_WSBEiJ_G0014788.1 mouse_genomes_project 18 65479754 65500135 + Gm15958 processed_transcript processed_transcript MGP_WSBEiJ_T0047987.1 MGP_WSBEiJ_G0023423.1 mouse_genomes_project 18 7962729 7997964 + MGP_WSBEiJ_P0047987 Gata6 protein_coding protein_coding MGP_WSBEiJ_T0048429.1 MGP_WSBEiJ_G0023618.1 mouse_genomes_project 18 35631079 35737854 + MGP_WSBEiJ_P0048429 Pcdhga10 protein_coding protein_coding MGP_WSBEiJ_T0013008.1 MGP_WSBEiJ_G0011138.1 mouse_genomes_project 18 37312434 37312785 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0048934.1 MGP_WSBEiJ_G0023807.1 mouse_genomes_project 18 67769119 67784460 - MGP_WSBEiJ_P0048934 Mc2r protein_coding protein_coding MGP_WSBEiJ_T0048430.1 MGP_WSBEiJ_G0023619.1 mouse_genomes_project 18 35636822 35737854 + MGP_WSBEiJ_P0048430 Pcdhgb7 protein_coding protein_coding MGP_WSBEiJ_T0048822.1 MGP_WSBEiJ_G0023766.1 mouse_genomes_project 18 61637659 61638480 + MGP_WSBEiJ_P0048822 Gm17732 protein_coding protein_coding MGP_WSBEiJ_T0011248.1 MGP_WSBEiJ_G0009405.1 mouse_genomes_project 18 16946638 16946935 + Gm25392 misc_RNA misc_RNA MGP_WSBEiJ_T0012983.1 MGP_WSBEiJ_G0011113.1 mouse_genomes_project 18 2470200 2470573 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049066.1 MGP_WSBEiJ_G0023835.1 mouse_genomes_project 18 74983709 75015169 + MGP_WSBEiJ_P0049066 Smad7 protein_coding protein_coding MGP_WSBEiJ_T0049067.1 MGP_WSBEiJ_G0023835.1 mouse_genomes_project 18 74986642 75014686 + MGP_WSBEiJ_P0049067 Smad7 protein_coding protein_coding MGP_WSBEiJ_T0049068.1 MGP_WSBEiJ_G0023835.1 mouse_genomes_project 18 74986749 75013199 + MGP_WSBEiJ_P0049068 Smad7 protein_coding protein_coding MGP_WSBEiJ_T0049069.1 MGP_WSBEiJ_G0023835.1 mouse_genomes_project 18 74987735 75013578 + MGP_WSBEiJ_P0049069 Smad7 protein_coding protein_coding MGP_WSBEiJ_T0049070.1 MGP_WSBEiJ_G0023835.1 mouse_genomes_project 18 74992991 75013214 + Smad7 protein_coding processed_transcript MGP_WSBEiJ_T0003737.1 MGP_WSBEiJ_G0003360.1 mouse_genomes_project 18 35723921 35725114 - Gm29994 antisense antisense MGP_WSBEiJ_T0047994.1 MGP_WSBEiJ_G0023427.1 mouse_genomes_project 18 9173027 9201265 + MGP_WSBEiJ_P0047994 Riok3 protein_coding protein_coding MGP_WSBEiJ_T0048167.1 MGP_WSBEiJ_G0023498.1 mouse_genomes_project 18 29946849 29977238 + MGP_WSBEiJ_P0048167 Ercc3 protein_coding protein_coding MGP_WSBEiJ_T0048168.1 MGP_WSBEiJ_G0023498.1 mouse_genomes_project 18 29946903 29977238 + Ercc3 protein_coding retained_intron MGP_WSBEiJ_T0048169.1 MGP_WSBEiJ_G0023498.1 mouse_genomes_project 18 29964353 29977178 + Ercc3 protein_coding processed_transcript MGP_WSBEiJ_T0011259.1 MGP_WSBEiJ_G0009416.1 mouse_genomes_project 18 41910258 41910571 + Gm23894 misc_RNA misc_RNA MGP_WSBEiJ_T0097199.1 MGP_WSBEiJ_G0035880.1 mouse_genomes_project 18 74350664 74350743 - Scarna17 scaRNA scaRNA MGP_WSBEiJ_T0098038.1 MGP_WSBEiJ_G0036701.1 mouse_genomes_project 18 50016622 50016747 - Gm25785 snRNA snRNA MGP_WSBEiJ_T0097001.1 MGP_WSBEiJ_G0035682.1 mouse_genomes_project 18 17110938 17111036 + Gm24238 rRNA rRNA MGP_WSBEiJ_T0003761.1 MGP_WSBEiJ_G0003375.1 mouse_genomes_project 18 80792469 80793589 + Gm27239 antisense antisense MGP_WSBEiJ_T0048337.1 MGP_WSBEiJ_G0023557.1 mouse_genomes_project 18 34654347 34661607 + MGP_WSBEiJ_P0048337 Tmco6 protein_coding protein_coding MGP_WSBEiJ_T0011251.1 MGP_WSBEiJ_G0009408.1 mouse_genomes_project 18 23084421 23084731 - Gm25845 misc_RNA misc_RNA MGP_WSBEiJ_T0003723.1 MGP_WSBEiJ_G0003349.1 mouse_genomes_project 18 17936127 17999471 - Gm16090 antisense antisense MGP_WSBEiJ_T0049015.1 MGP_WSBEiJ_G0023816.1 mouse_genomes_project 18 70037382 70097409 + MGP_WSBEiJ_P0049015 Mbd2 protein_coding protein_coding MGP_WSBEiJ_T0049016.1 MGP_WSBEiJ_G0023816.1 mouse_genomes_project 18 70037527 70054298 + MGP_WSBEiJ_P0049016 Mbd2 protein_coding protein_coding MGP_WSBEiJ_T0049017.1 MGP_WSBEiJ_G0023816.1 mouse_genomes_project 18 70052170 70094071 + MGP_WSBEiJ_P0049017 Mbd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049018.1 MGP_WSBEiJ_G0023816.1 mouse_genomes_project 18 70064629 70088583 + Mbd2 protein_coding retained_intron MGP_WSBEiJ_T0049019.1 MGP_WSBEiJ_G0023816.1 mouse_genomes_project 18 70089122 70097055 + Mbd2 protein_coding retained_intron MGP_WSBEiJ_T0048327.1 MGP_WSBEiJ_G0023553.1 mouse_genomes_project 18 34579103 34583624 - MGP_WSBEiJ_P0048327 Sra1 protein_coding protein_coding MGP_WSBEiJ_T0048328.1 MGP_WSBEiJ_G0023553.1 mouse_genomes_project 18 34579668 34582708 - MGP_WSBEiJ_P0048328 Sra1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0048329.1 MGP_WSBEiJ_G0023553.1 mouse_genomes_project 18 34579694 34582728 - Sra1 protein_coding retained_intron MGP_WSBEiJ_T0048330.1 MGP_WSBEiJ_G0023553.1 mouse_genomes_project 18 34579851 34582707 - MGP_WSBEiJ_P0048330 Sra1 protein_coding protein_coding MGP_WSBEiJ_T0048331.1 MGP_WSBEiJ_G0023553.1 mouse_genomes_project 18 34582243 34582698 - Sra1 protein_coding retained_intron MGP_WSBEiJ_T0048332.1 MGP_WSBEiJ_G0023553.1 mouse_genomes_project 18 34583587 34590341 - MGP_WSBEiJ_P0048332 Sra1 protein_coding protein_coding MGP_WSBEiJ_T0013005.1 MGP_WSBEiJ_G0011135.1 mouse_genomes_project 18 36661595 36661709 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0098045.1 MGP_WSBEiJ_G0036708.1 mouse_genomes_project 18 62612430 62612537 + Gm24848 snRNA snRNA MGP_WSBEiJ_T0098023.1 MGP_WSBEiJ_G0036686.1 mouse_genomes_project 18 4688975 4689083 + Gm24292 snRNA snRNA MGP_WSBEiJ_T0011253.1 MGP_WSBEiJ_G0009410.1 mouse_genomes_project 18 34725969 34726112 + Vaultrc5 misc_RNA misc_RNA MGP_WSBEiJ_T0011254.1 MGP_WSBEiJ_G0009411.1 mouse_genomes_project 18 36532651 36532722 + Gm27369 misc_RNA misc_RNA MGP_WSBEiJ_T0099270.1 MGP_WSBEiJ_G0037933.1 mouse_genomes_project 18 29139766 29139899 - Gm25396 snoRNA snoRNA MGP_WSBEiJ_T0047974.1 MGP_WSBEiJ_G0023419.1 mouse_genomes_project 18 7454197 7485749 - Esco1 protein_coding processed_transcript MGP_WSBEiJ_T0047975.1 MGP_WSBEiJ_G0023419.1 mouse_genomes_project 18 7454206 7503939 - MGP_WSBEiJ_P0047975 Esco1 protein_coding protein_coding MGP_WSBEiJ_T0047976.1 MGP_WSBEiJ_G0023419.1 mouse_genomes_project 18 7454214 7504162 - MGP_WSBEiJ_P0047976 Esco1 protein_coding protein_coding MGP_WSBEiJ_T0047977.1 MGP_WSBEiJ_G0023419.1 mouse_genomes_project 18 7454214 7503919 - MGP_WSBEiJ_P0047977 Esco1 protein_coding protein_coding MGP_WSBEiJ_T0047978.1 MGP_WSBEiJ_G0023419.1 mouse_genomes_project 18 7454225 7503919 - Esco1 protein_coding processed_transcript MGP_WSBEiJ_T0006969.1 MGP_WSBEiJ_G0005728.1 mouse_genomes_project 19 20769745 20813182 - C330002G04Rik lincRNA lincRNA MGP_WSBEiJ_T0003780.1 MGP_WSBEiJ_G0003386.1 mouse_genomes_project 19 4340452 4342206 + 1700105P06Rik antisense antisense MGP_WSBEiJ_T0051051.1 MGP_WSBEiJ_G0024499.1 mouse_genomes_project 19 46929577 46934323 + MGP_WSBEiJ_P0051051 Sfr1 protein_coding protein_coding MGP_WSBEiJ_T0049519.1 MGP_WSBEiJ_G0023966.1 mouse_genomes_project 19 2247603 2256028 + MGP_WSBEiJ_P0049519 Catsper1 protein_coding protein_coding MGP_WSBEiJ_T0098080.1 MGP_WSBEiJ_G0036743.1 mouse_genomes_project 19 52568182 52568289 - Gm24724 snRNA snRNA MGP_WSBEiJ_T0050261.1 MGP_WSBEiJ_G0024222.1 mouse_genomes_project 19 11097005 11098030 - MGP_WSBEiJ_P0050261 Olfr1500 protein_coding protein_coding MGP_WSBEiJ_T0050660.1 MGP_WSBEiJ_G0024368.1 mouse_genomes_project 19 38281885 38324753 - MGP_WSBEiJ_P0050660 protein_coding protein_coding MGP_WSBEiJ_T0050619.1 MGP_WSBEiJ_G0024352.1 mouse_genomes_project 19 36493500 36640099 - MGP_WSBEiJ_P0050619 Myof protein_coding protein_coding MGP_WSBEiJ_T0050620.1 MGP_WSBEiJ_G0024352.1 mouse_genomes_project 19 36493500 36640099 - MGP_WSBEiJ_P0050620 Myof protein_coding protein_coding MGP_WSBEiJ_T0050621.1 MGP_WSBEiJ_G0024352.1 mouse_genomes_project 19 36494193 36639843 - MGP_WSBEiJ_P0050621 Myof protein_coding unknown_likely_coding MGP_WSBEiJ_T0051114.1 MGP_WSBEiJ_G0024522.1 mouse_genomes_project 19 54727931 54774696 - MGP_WSBEiJ_P0051114 Gucy2g protein_coding protein_coding MGP_WSBEiJ_T0049397.1 MGP_WSBEiJ_G0023921.1 mouse_genomes_project 19 975772 987222 - MGP_WSBEiJ_P0049397 Carns1 protein_coding protein_coding MGP_WSBEiJ_T0050248.1 MGP_WSBEiJ_G0024209.1 mouse_genomes_project 19 10534614 10535541 + MGP_WSBEiJ_P0050248 Olfr1467 protein_coding protein_coding MGP_WSBEiJ_T0050324.1 MGP_WSBEiJ_G0024247.1 mouse_genomes_project 19 19089807 19173600 - MGP_WSBEiJ_P0050324 Gda protein_coding protein_coding MGP_WSBEiJ_T0050325.1 MGP_WSBEiJ_G0024247.1 mouse_genomes_project 19 19117260 19173582 - Gda protein_coding retained_intron MGP_WSBEiJ_T0050443.1 MGP_WSBEiJ_G0024287.1 mouse_genomes_project 19 27321179 27385854 + MGP_WSBEiJ_P0050443 Jak2 protein_coding protein_coding MGP_WSBEiJ_T0050444.1 MGP_WSBEiJ_G0024287.1 mouse_genomes_project 19 27321179 27385854 + MGP_WSBEiJ_P0050444 Jak2 protein_coding protein_coding MGP_WSBEiJ_T0098066.1 MGP_WSBEiJ_G0036729.1 mouse_genomes_project 19 16294465 16294629 + Gm23238 snRNA snRNA MGP_WSBEiJ_T0049898.1 MGP_WSBEiJ_G0024065.1 mouse_genomes_project 19 4590039 4592138 + Hrasls5 protein_coding retained_intron MGP_WSBEiJ_T0049899.1 MGP_WSBEiJ_G0024065.1 mouse_genomes_project 19 4590053 4618563 + MGP_WSBEiJ_P0049899 Hrasls5 protein_coding protein_coding MGP_WSBEiJ_T0049900.1 MGP_WSBEiJ_G0024065.1 mouse_genomes_project 19 4590103 4618962 + MGP_WSBEiJ_P0049900 Hrasls5 protein_coding protein_coding MGP_WSBEiJ_T0050193.1 MGP_WSBEiJ_G0024169.1 mouse_genomes_project 19 9175280 9176506 - MGP_WSBEiJ_P0050193 protein_coding protein_coding MGP_WSBEiJ_T0049540.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2396356 2399966 + MGP_WSBEiJ_P0049540 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049541.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2396698 2398452 + MGP_WSBEiJ_P0049541 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049542.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397071 2405986 + MGP_WSBEiJ_P0049542 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049543.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397090 2402499 + Efemp2 protein_coding retained_intron MGP_WSBEiJ_T0049544.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397123 2405986 + MGP_WSBEiJ_P0049544 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049545.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397123 2404874 + MGP_WSBEiJ_P0049545 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049546.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397130 2400644 + MGP_WSBEiJ_P0049546 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049547.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397133 2405986 + MGP_WSBEiJ_P0049547 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049548.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397160 2397852 + Efemp2 protein_coding retained_intron MGP_WSBEiJ_T0049549.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397451 2400708 + MGP_WSBEiJ_P0049549 Efemp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049550.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397503 2405908 + MGP_WSBEiJ_P0049550 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049551.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2397688 2404212 + MGP_WSBEiJ_P0049551 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049552.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2404177 2405049 + MGP_WSBEiJ_P0049552 Efemp2 protein_coding protein_coding MGP_WSBEiJ_T0049553.1 MGP_WSBEiJ_G0023978.1 mouse_genomes_project 19 2404255 2405792 + MGP_WSBEiJ_P0049553 Efemp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0100250.1 MGP_WSBEiJ_G0038785.1 mouse_genomes_project 19 58395941 58398348 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100251.1 MGP_WSBEiJ_G0038785.1 mouse_genomes_project 19 58395941 58396355 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100252.1 MGP_WSBEiJ_G0038785.1 mouse_genomes_project 19 58396106 58412250 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0097013.1 MGP_WSBEiJ_G0035694.1 mouse_genomes_project 19 4208543 4208664 + Gm23997 rRNA rRNA MGP_WSBEiJ_T0049848.1 MGP_WSBEiJ_G0024053.1 mouse_genomes_project 19 4032188 4047352 - MGP_WSBEiJ_P0049848 Flrt1 protein_coding protein_coding MGP_WSBEiJ_T0050868.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43487384 43494239 - MGP_WSBEiJ_P0050868 Ndufb8 protein_coding protein_coding MGP_WSBEiJ_T0050869.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43489052 43494253 - MGP_WSBEiJ_P0050869 Ndufb8 protein_coding protein_coding MGP_WSBEiJ_T0050870.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43489065 43494232 - MGP_WSBEiJ_P0050870 Ndufb8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050871.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43489067 43491693 - Ndufb8 protein_coding retained_intron MGP_WSBEiJ_T0050872.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43491434 43493799 - MGP_WSBEiJ_P0050872 Ndufb8 protein_coding protein_coding MGP_WSBEiJ_T0050873.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43491652 43494217 - MGP_WSBEiJ_P0050873 Ndufb8 protein_coding protein_coding MGP_WSBEiJ_T0050874.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43492087 43494218 - Ndufb8 protein_coding retained_intron MGP_WSBEiJ_T0050875.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43493513 43494239 - Ndufb8 protein_coding retained_intron MGP_WSBEiJ_T0050876.1 MGP_WSBEiJ_G0024440.1 mouse_genomes_project 19 43493527 43494236 - Ndufb8 protein_coding retained_intron MGP_WSBEiJ_T0051000.1 MGP_WSBEiJ_G0024477.1 mouse_genomes_project 19 45637572 45687227 - MGP_WSBEiJ_P0051000 Arl3 protein_coding protein_coding MGP_WSBEiJ_T0097181.1 MGP_WSBEiJ_G0035862.1 mouse_genomes_project 19 2769732 2769788 - Gm27702 sRNA sRNA MGP_WSBEiJ_T0049604.1 MGP_WSBEiJ_G0023996.1 mouse_genomes_project 19 2696395 2709278 - MGP_WSBEiJ_P0049604 Scyl1 protein_coding protein_coding MGP_WSBEiJ_T0013043.1 MGP_WSBEiJ_G0011173.1 mouse_genomes_project 19 13820892 13821679 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049841.1 MGP_WSBEiJ_G0024048.1 mouse_genomes_project 19 3917634 3923365 - MGP_WSBEiJ_P0049841 Nudt22 protein_coding protein_coding MGP_WSBEiJ_T0049842.1 MGP_WSBEiJ_G0024048.1 mouse_genomes_project 19 3917634 3923285 - MGP_WSBEiJ_P0049842 Nudt22 protein_coding protein_coding MGP_WSBEiJ_T0049843.1 MGP_WSBEiJ_G0024048.1 mouse_genomes_project 19 3917635 3919791 - Nudt22 protein_coding retained_intron MGP_WSBEiJ_T0049482.1 MGP_WSBEiJ_G0023948.1 mouse_genomes_project 19 1754872 1774405 - MGP_WSBEiJ_P0049482 Bbs1 protein_coding protein_coding MGP_WSBEiJ_T0010149.1 MGP_WSBEiJ_G0008306.1 mouse_genomes_project 19 42505439 42505556 + Gm22646 miRNA miRNA MGP_WSBEiJ_T0006991.1 MGP_WSBEiJ_G0005743.1 mouse_genomes_project 19 43643663 43646568 - Gm26644 lincRNA lincRNA MGP_WSBEiJ_T0049329.1 MGP_WSBEiJ_G0023906.1 mouse_genomes_project 19 786668 793424 + MGP_WSBEiJ_P0049329 Tbx10 protein_coding protein_coding MGP_WSBEiJ_T0051117.1 MGP_WSBEiJ_G0024525.1 mouse_genomes_project 19 54853424 55178002 + MGP_WSBEiJ_P0051117 Vti1a protein_coding protein_coding MGP_WSBEiJ_T0051118.1 MGP_WSBEiJ_G0024525.1 mouse_genomes_project 19 54853524 55175355 + MGP_WSBEiJ_P0051118 Vti1a protein_coding unknown_likely_coding MGP_WSBEiJ_T0050906.1 MGP_WSBEiJ_G0024454.1 mouse_genomes_project 19 44568622 44578251 - MGP_WSBEiJ_P0050906 Poll protein_coding protein_coding MGP_WSBEiJ_T0050201.1 MGP_WSBEiJ_G0024177.1 mouse_genomes_project 19 9412495 9413594 + MGP_WSBEiJ_P0050201 protein_coding protein_coding MGP_WSBEiJ_T0003782.1 MGP_WSBEiJ_G0003388.1 mouse_genomes_project 19 8554109 8554852 - Gm19261 antisense antisense MGP_WSBEiJ_T0050070.1 MGP_WSBEiJ_G0024121.1 mouse_genomes_project 19 7613293 7637468 + MGP_WSBEiJ_P0050070 Ddb1 protein_coding protein_coding MGP_WSBEiJ_T0049425.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1142284 1233678 - MGP_WSBEiJ_P0049425 Kdm2a protein_coding protein_coding MGP_WSBEiJ_T0049426.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1144036 1231401 - MGP_WSBEiJ_P0049426 Kdm2a protein_coding protein_coding MGP_WSBEiJ_T0049427.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1147791 1152167 - MGP_WSBEiJ_P0049427 Kdm2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049428.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1148716 1152422 - Kdm2a protein_coding retained_intron MGP_WSBEiJ_T0049429.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1154524 1163605 - MGP_WSBEiJ_P0049429 Kdm2a protein_coding protein_coding MGP_WSBEiJ_T0049430.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1158809 1163523 - MGP_WSBEiJ_P0049430 Kdm2a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049431.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1171115 1231404 - MGP_WSBEiJ_P0049431 Kdm2a protein_coding protein_coding MGP_WSBEiJ_T0049432.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1177759 1231400 - Kdm2a protein_coding retained_intron MGP_WSBEiJ_T0049433.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1179748 1192403 - MGP_WSBEiJ_P0049433 Kdm2a protein_coding protein_coding MGP_WSBEiJ_T0049434.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1180162 1231392 - Kdm2a protein_coding retained_intron MGP_WSBEiJ_T0049435.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1223256 1231401 - MGP_WSBEiJ_P0049435 Kdm2a protein_coding protein_coding MGP_WSBEiJ_T0049436.1 MGP_WSBEiJ_G0023930.1 mouse_genomes_project 19 1226771 1231419 - Kdm2a protein_coding retained_intron MGP_WSBEiJ_T0006992.1 MGP_WSBEiJ_G0005744.1 mouse_genomes_project 19 44305591 44317695 - Gm29595 lincRNA lincRNA MGP_WSBEiJ_T0006993.1 MGP_WSBEiJ_G0005744.1 mouse_genomes_project 19 44305600 44308525 - Gm29595 lincRNA lincRNA MGP_WSBEiJ_T0049856.1 MGP_WSBEiJ_G0024057.1 mouse_genomes_project 19 4215942 4218764 + MGP_WSBEiJ_P0049856 Rcor2 protein_coding protein_coding MGP_WSBEiJ_T0049857.1 MGP_WSBEiJ_G0024057.1 mouse_genomes_project 19 4217578 4225635 + MGP_WSBEiJ_P0049857 Rcor2 protein_coding protein_coding MGP_WSBEiJ_T0049858.1 MGP_WSBEiJ_G0024057.1 mouse_genomes_project 19 4219571 4220401 + Rcor2 protein_coding retained_intron MGP_WSBEiJ_T0050628.1 MGP_WSBEiJ_G0024356.1 mouse_genomes_project 19 36733838 36790270 + MGP_WSBEiJ_P0050628 Pde6c protein_coding protein_coding MGP_WSBEiJ_T0050629.1 MGP_WSBEiJ_G0024356.1 mouse_genomes_project 19 36733838 36790270 + MGP_WSBEiJ_P0050629 Pde6c protein_coding protein_coding MGP_WSBEiJ_T0050630.1 MGP_WSBEiJ_G0024356.1 mouse_genomes_project 19 36734003 36790271 + MGP_WSBEiJ_P0050630 Pde6c protein_coding unknown_likely_coding MGP_WSBEiJ_T0050985.1 MGP_WSBEiJ_G0024471.1 mouse_genomes_project 19 45411189 45413458 + MGP_WSBEiJ_P0050985 Fbxl15 protein_coding protein_coding MGP_WSBEiJ_T0050986.1 MGP_WSBEiJ_G0024471.1 mouse_genomes_project 19 45411192 45413457 + MGP_WSBEiJ_P0050986 Fbxl15 protein_coding protein_coding MGP_WSBEiJ_T0051103.1 MGP_WSBEiJ_G0024517.1 mouse_genomes_project 19 53393403 53408237 - MGP_WSBEiJ_P0051103 Bbip1 protein_coding protein_coding MGP_WSBEiJ_T0050351.1 MGP_WSBEiJ_G0024259.1 mouse_genomes_project 19 21548877 21745982 + MGP_WSBEiJ_P0050351 Apba1 protein_coding protein_coding MGP_WSBEiJ_T0099299.1 MGP_WSBEiJ_G0037962.1 mouse_genomes_project 19 5771373 5771448 + Gm25894 snoRNA snoRNA MGP_WSBEiJ_T0050247.1 MGP_WSBEiJ_G0024208.1 mouse_genomes_project 19 10517830 10518763 + MGP_WSBEiJ_P0050247 Olfr1466 protein_coding protein_coding MGP_WSBEiJ_T0010133.1 MGP_WSBEiJ_G0008290.1 mouse_genomes_project 19 13718782 13718895 - Mir496b miRNA miRNA MGP_WSBEiJ_T0050768.1 MGP_WSBEiJ_G0024405.1 mouse_genomes_project 19 40902274 40936185 + MGP_WSBEiJ_P0050768 Pi4k2a protein_coding protein_coding MGP_WSBEiJ_T0049970.1 MGP_WSBEiJ_G0024081.1 mouse_genomes_project 19 5876252 5891784 + MGP_WSBEiJ_P0049970 Hnrnpul2 protein_coding protein_coding MGP_WSBEiJ_T0050199.1 MGP_WSBEiJ_G0024175.1 mouse_genomes_project 19 9409272 9413594 + MGP_WSBEiJ_P0050199 Olfr1434 protein_coding protein_coding MGP_WSBEiJ_T0050407.1 MGP_WSBEiJ_G0024277.1 mouse_genomes_project 19 25298315 25312883 + MGP_WSBEiJ_P0050407 Kcnv2 protein_coding protein_coding MGP_WSBEiJ_T0050376.1 MGP_WSBEiJ_G0024272.1 mouse_genomes_project 19 23523859 23538273 + MGP_WSBEiJ_P0050376 Dmrt3 protein_coding protein_coding MGP_WSBEiJ_T0050766.1 MGP_WSBEiJ_G0024403.1 mouse_genomes_project 19 40861414 40862794 + MGP_WSBEiJ_P0050766 4933411K16Rik protein_coding protein_coding MGP_WSBEiJ_T0049461.1 MGP_WSBEiJ_G0023941.1 mouse_genomes_project 19 1637158 1646497 - MGP_WSBEiJ_P0049461 protein_coding protein_coding MGP_WSBEiJ_T0049465.1 MGP_WSBEiJ_G0023941.1 mouse_genomes_project 19 1642927 1646479 - protein_coding retained_intron MGP_WSBEiJ_T0006951.1 MGP_WSBEiJ_G0005717.1 mouse_genomes_project 19 2738755 2745738 - Malat1 lincRNA lincRNA MGP_WSBEiJ_T0006952.1 MGP_WSBEiJ_G0005717.1 mouse_genomes_project 19 2738756 2740530 - Malat1 lincRNA lincRNA MGP_WSBEiJ_T0006953.1 MGP_WSBEiJ_G0005717.1 mouse_genomes_project 19 2738759 2740018 - Malat1 lincRNA lincRNA MGP_WSBEiJ_T0006954.1 MGP_WSBEiJ_G0005717.1 mouse_genomes_project 19 2744981 2745737 - Malat1 lincRNA lincRNA MGP_WSBEiJ_T0006955.1 MGP_WSBEiJ_G0005717.1 mouse_genomes_project 19 2745008 2745706 - Malat1 lincRNA lincRNA MGP_WSBEiJ_T0051119.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55300612 55503258 + MGP_WSBEiJ_P0051119 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051120.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55300612 55503258 + MGP_WSBEiJ_P0051120 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051121.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55300622 55502856 + MGP_WSBEiJ_P0051121 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051122.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55300622 55502833 + MGP_WSBEiJ_P0051122 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051123.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55300686 55493738 + MGP_WSBEiJ_P0051123 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051124.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55300686 55502320 + MGP_WSBEiJ_P0051124 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051125.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55300857 55501814 + MGP_WSBEiJ_P0051125 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051126.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301041 55480566 + MGP_WSBEiJ_P0051126 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051127.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301042 55480565 + MGP_WSBEiJ_P0051127 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051128.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301042 55480566 + MGP_WSBEiJ_P0051128 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051129.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301072 55478402 + Tcf7l2 protein_coding retained_intron MGP_WSBEiJ_T0051130.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301072 55493735 + MGP_WSBEiJ_P0051130 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051131.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301121 55503258 + MGP_WSBEiJ_P0051131 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051132.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301153 55502835 + MGP_WSBEiJ_P0051132 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051133.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301257 55501814 + MGP_WSBEiJ_P0051133 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051134.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55301634 55478534 + Tcf7l2 protein_coding retained_intron MGP_WSBEiJ_T0051135.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55459888 55487386 + Tcf7l2 protein_coding processed_transcript MGP_WSBEiJ_T0051136.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55461070 55486737 + MGP_WSBEiJ_P0051136 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051137.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55462045 55502833 + MGP_WSBEiJ_P0051137 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0051138.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55462197 55480480 + Tcf7l2 protein_coding processed_transcript MGP_WSBEiJ_T0051139.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55464833 55486812 + Tcf7l2 protein_coding processed_transcript MGP_WSBEiJ_T0051140.1 MGP_WSBEiJ_G0024526.1 mouse_genomes_project 19 55465077 55487372 + MGP_WSBEiJ_P0051140 Tcf7l2 protein_coding protein_coding MGP_WSBEiJ_T0013045.1 MGP_WSBEiJ_G0011175.1 mouse_genomes_project 19 22547173 22548144 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050927.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44830121 44832587 - MGP_WSBEiJ_P0050927 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0050928.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44830633 44856215 - Kcnip2 protein_coding retained_intron MGP_WSBEiJ_T0050929.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44830633 44856254 - MGP_WSBEiJ_P0050929 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0050930.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44830633 44856215 - MGP_WSBEiJ_P0050930 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0050931.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44831636 44852493 - MGP_WSBEiJ_P0050931 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0050932.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44831735 44856218 - MGP_WSBEiJ_P0050932 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0050933.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44831957 44833992 - MGP_WSBEiJ_P0050933 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0050934.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44831957 44856026 - MGP_WSBEiJ_P0050934 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0050935.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44832278 44855996 - MGP_WSBEiJ_P0050935 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0050936.1 MGP_WSBEiJ_G0024460.1 mouse_genomes_project 19 44833269 44835332 - MGP_WSBEiJ_P0050936 Kcnip2 protein_coding protein_coding MGP_WSBEiJ_T0010134.1 MGP_WSBEiJ_G0008291.1 mouse_genomes_project 19 15417782 15417875 - Gm23063 miRNA miRNA MGP_WSBEiJ_T0051221.1 MGP_WSBEiJ_G0024546.1 mouse_genomes_project 19 58460676 58478021 + MGP_WSBEiJ_P0051221 Pnliprp2 protein_coding protein_coding MGP_WSBEiJ_T0006978.1 MGP_WSBEiJ_G0005734.1 mouse_genomes_project 19 27572230 27610695 - A930007I19Rik lincRNA lincRNA MGP_WSBEiJ_T0006979.1 MGP_WSBEiJ_G0005734.1 mouse_genomes_project 19 27572809 27611860 - A930007I19Rik lincRNA lincRNA MGP_WSBEiJ_T0006980.1 MGP_WSBEiJ_G0005734.1 mouse_genomes_project 19 27591011 27610690 - A930007I19Rik lincRNA lincRNA MGP_WSBEiJ_T0050864.1 MGP_WSBEiJ_G0024438.1 mouse_genomes_project 19 43454864 43484681 - MGP_WSBEiJ_P0050864 Sec31b protein_coding protein_coding MGP_WSBEiJ_T0050865.1 MGP_WSBEiJ_G0024438.1 mouse_genomes_project 19 43455102 43484664 - MGP_WSBEiJ_P0050865 Sec31b protein_coding protein_coding MGP_WSBEiJ_T0050866.1 MGP_WSBEiJ_G0024438.1 mouse_genomes_project 19 43455538 43458478 - MGP_WSBEiJ_P0050866 Sec31b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049637.1 MGP_WSBEiJ_G0024006.1 mouse_genomes_project 19 3035380 3042539 - MGP_WSBEiJ_P0049637 Mrpl49 protein_coding protein_coding MGP_WSBEiJ_T0050645.1 MGP_WSBEiJ_G0024361.1 mouse_genomes_project 19 37445769 37478598 - MGP_WSBEiJ_P0050645 Noc3l protein_coding protein_coding MGP_WSBEiJ_T0050532.1 MGP_WSBEiJ_G0024318.1 mouse_genomes_project 19 32437110 32456559 + MGP_WSBEiJ_P0050532 Lipn protein_coding protein_coding MGP_WSBEiJ_T0050533.1 MGP_WSBEiJ_G0024318.1 mouse_genomes_project 19 32437130 32444174 + MGP_WSBEiJ_P0050533 Lipn protein_coding protein_coding MGP_WSBEiJ_T0050534.1 MGP_WSBEiJ_G0024318.1 mouse_genomes_project 19 32437281 32452649 + MGP_WSBEiJ_P0050534 Lipn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049448.1 MGP_WSBEiJ_G0023935.1 mouse_genomes_project 19 1458171 1462055 - MGP_WSBEiJ_P0049448 Lrfn4 protein_coding protein_coding MGP_WSBEiJ_T0049449.1 MGP_WSBEiJ_G0023935.1 mouse_genomes_project 19 1458178 1461890 - MGP_WSBEiJ_P0049449 Lrfn4 protein_coding protein_coding MGP_WSBEiJ_T0050767.1 MGP_WSBEiJ_G0024404.1 mouse_genomes_project 19 40887008 40898146 - MGP_WSBEiJ_P0050767 Morn4 protein_coding protein_coding MGP_WSBEiJ_T0010163.1 MGP_WSBEiJ_G0008320.1 mouse_genomes_project 19 60549528 60549597 - Mir3084-2 miRNA miRNA MGP_WSBEiJ_T0017119.1 MGP_WSBEiJ_G0014805.1 mouse_genomes_project 19 24554757 24557356 - Gm20616 processed_transcript processed_transcript MGP_WSBEiJ_T0017120.1 MGP_WSBEiJ_G0014805.1 mouse_genomes_project 19 24554968 24557347 - Gm20616 processed_transcript processed_transcript MGP_WSBEiJ_T0099297.1 MGP_WSBEiJ_G0037960.1 mouse_genomes_project 19 881992 882207 - Gm23927 snoRNA snoRNA MGP_WSBEiJ_T0049638.1 MGP_WSBEiJ_G0024007.1 mouse_genomes_project 19 3042675 3044314 + MGP_WSBEiJ_P0049638 protein_coding protein_coding MGP_WSBEiJ_T0049639.1 MGP_WSBEiJ_G0024007.1 mouse_genomes_project 19 3042675 3044314 + MGP_WSBEiJ_P0049639 protein_coding protein_coding MGP_WSBEiJ_T0049641.1 MGP_WSBEiJ_G0024007.1 mouse_genomes_project 19 3042754 3044314 + MGP_WSBEiJ_P0049641 protein_coding protein_coding MGP_WSBEiJ_T0006987.1 MGP_WSBEiJ_G0005740.1 mouse_genomes_project 19 36648529 36651509 - I830134H01Rik lincRNA lincRNA MGP_WSBEiJ_T0006988.1 MGP_WSBEiJ_G0005740.1 mouse_genomes_project 19 36648639 36651509 - I830134H01Rik lincRNA lincRNA MGP_WSBEiJ_T0050244.1 MGP_WSBEiJ_G0024205.1 mouse_genomes_project 19 10364332 10365256 + MGP_WSBEiJ_P0050244 Olfr1462 protein_coding protein_coding MGP_WSBEiJ_T0050163.1 MGP_WSBEiJ_G0024153.1 mouse_genomes_project 19 8626588 8638541 - MGP_WSBEiJ_P0050163 Ms4a6d protein_coding protein_coding MGP_WSBEiJ_T0050164.1 MGP_WSBEiJ_G0024153.1 mouse_genomes_project 19 8626967 8633454 - Ms4a6d protein_coding processed_transcript MGP_WSBEiJ_T0050165.1 MGP_WSBEiJ_G0024153.1 mouse_genomes_project 19 8627950 8633548 - Ms4a6d protein_coding retained_intron MGP_WSBEiJ_T0010139.1 MGP_WSBEiJ_G0008296.1 mouse_genomes_project 19 31401717 31401807 + Mir3970 miRNA miRNA MGP_WSBEiJ_T0096808.1 MGP_WSBEiJ_G0035489.1 mouse_genomes_project 19 60747947 60748530 - pseudogene pseudogene MGP_WSBEiJ_T0017133.1 MGP_WSBEiJ_G0014810.1 mouse_genomes_project 19 45344669 45347803 - Gm16726 processed_transcript processed_transcript MGP_WSBEiJ_T0050657.1 MGP_WSBEiJ_G0024367.1 mouse_genomes_project 19 37931406 37988614 + MGP_WSBEiJ_P0050657 Cyp2c29 protein_coding protein_coding MGP_WSBEiJ_T0050658.1 MGP_WSBEiJ_G0024367.1 mouse_genomes_project 19 37940836 37988665 + MGP_WSBEiJ_P0050658 Cyp2c29 protein_coding protein_coding MGP_WSBEiJ_T0050659.1 MGP_WSBEiJ_G0024367.1 mouse_genomes_project 19 37940836 37988679 + MGP_WSBEiJ_P0050659 Cyp2c29 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0006963.1 MGP_WSBEiJ_G0005723.1 mouse_genomes_project 19 8076891 8080161 - AW112010 lincRNA lincRNA MGP_WSBEiJ_T0051148.1 MGP_WSBEiJ_G0024528.1 mouse_genomes_project 19 55902883 55980646 - MGP_WSBEiJ_P0051148 Nrap protein_coding protein_coding MGP_WSBEiJ_T0051149.1 MGP_WSBEiJ_G0024528.1 mouse_genomes_project 19 55902889 55980672 - MGP_WSBEiJ_P0051149 Nrap protein_coding protein_coding MGP_WSBEiJ_T0051150.1 MGP_WSBEiJ_G0024528.1 mouse_genomes_project 19 55902949 55980670 - MGP_WSBEiJ_P0051150 Nrap protein_coding protein_coding MGP_WSBEiJ_T0051151.1 MGP_WSBEiJ_G0024528.1 mouse_genomes_project 19 55902968 55980670 - MGP_WSBEiJ_P0051151 Nrap protein_coding protein_coding MGP_WSBEiJ_T0051152.1 MGP_WSBEiJ_G0024528.1 mouse_genomes_project 19 55903034 55969948 - MGP_WSBEiJ_P0051152 Nrap protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051153.1 MGP_WSBEiJ_G0024528.1 mouse_genomes_project 19 55903037 55980512 - MGP_WSBEiJ_P0051153 Nrap protein_coding protein_coding MGP_WSBEiJ_T0049816.1 MGP_WSBEiJ_G0024037.1 mouse_genomes_project 19 3817690 3823095 + MGP_WSBEiJ_P0049816 Trmt112 protein_coding protein_coding MGP_WSBEiJ_T0017085.1 MGP_WSBEiJ_G0014797.1 mouse_genomes_project 19 3266196 3274870 - Gm14963 processed_transcript processed_transcript MGP_WSBEiJ_T0051002.1 MGP_WSBEiJ_G0024479.1 mouse_genomes_project 19 45716243 45780368 + MGP_WSBEiJ_P0051002 Wbp1l protein_coding protein_coding MGP_WSBEiJ_T0051003.1 MGP_WSBEiJ_G0024479.1 mouse_genomes_project 19 45716272 45780364 + MGP_WSBEiJ_P0051003 Wbp1l protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051004.1 MGP_WSBEiJ_G0024479.1 mouse_genomes_project 19 45716273 45780361 + MGP_WSBEiJ_P0051004 Wbp1l protein_coding protein_coding MGP_WSBEiJ_T0051005.1 MGP_WSBEiJ_G0024479.1 mouse_genomes_project 19 45716283 45767309 + Wbp1l protein_coding processed_transcript MGP_WSBEiJ_T0051006.1 MGP_WSBEiJ_G0024479.1 mouse_genomes_project 19 45743103 45775525 + Wbp1l protein_coding processed_transcript MGP_WSBEiJ_T0051007.1 MGP_WSBEiJ_G0024479.1 mouse_genomes_project 19 45743103 45780364 + MGP_WSBEiJ_P0051007 Wbp1l protein_coding protein_coding MGP_WSBEiJ_T0011270.1 MGP_WSBEiJ_G0009427.1 mouse_genomes_project 19 2742065 2742151 - Gm27694 misc_RNA misc_RNA MGP_WSBEiJ_T0050050.1 MGP_WSBEiJ_G0024111.1 mouse_genomes_project 19 7239562 7298272 - MGP_WSBEiJ_P0050050 Dagla protein_coding protein_coding MGP_WSBEiJ_T0050051.1 MGP_WSBEiJ_G0024111.1 mouse_genomes_project 19 7239565 7298252 - MGP_WSBEiJ_P0050051 Dagla protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050052.1 MGP_WSBEiJ_G0024111.1 mouse_genomes_project 19 7247627 7251053 - Dagla protein_coding processed_transcript MGP_WSBEiJ_T0050281.1 MGP_WSBEiJ_G0024232.1 mouse_genomes_project 19 14416508 14705257 + MGP_WSBEiJ_P0050281 Prune2 protein_coding protein_coding MGP_WSBEiJ_T0050282.1 MGP_WSBEiJ_G0024232.1 mouse_genomes_project 19 14611321 14705266 + MGP_WSBEiJ_P0050282 Prune2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049685.1 MGP_WSBEiJ_G0024018.1 mouse_genomes_project 19 3107472 3116382 - MGP_WSBEiJ_P0049685 Snx15 protein_coding protein_coding MGP_WSBEiJ_T0049686.1 MGP_WSBEiJ_G0024018.1 mouse_genomes_project 19 3107925 3116225 - MGP_WSBEiJ_P0049686 Snx15 protein_coding protein_coding MGP_WSBEiJ_T0049687.1 MGP_WSBEiJ_G0024018.1 mouse_genomes_project 19 3108705 3109716 - Snx15 protein_coding retained_intron MGP_WSBEiJ_T0049688.1 MGP_WSBEiJ_G0024018.1 mouse_genomes_project 19 3108705 3115885 - Snx15 protein_coding processed_transcript MGP_WSBEiJ_T0049689.1 MGP_WSBEiJ_G0024018.1 mouse_genomes_project 19 3109565 3110361 - Snx15 protein_coding processed_transcript MGP_WSBEiJ_T0049690.1 MGP_WSBEiJ_G0024018.1 mouse_genomes_project 19 3109978 3116211 - Snx15 protein_coding retained_intron MGP_WSBEiJ_T0049691.1 MGP_WSBEiJ_G0024018.1 mouse_genomes_project 19 3110000 3116243 - MGP_WSBEiJ_P0049691 Snx15 protein_coding protein_coding MGP_WSBEiJ_T0050814.1 MGP_WSBEiJ_G0024421.1 mouse_genomes_project 19 42578077 42626740 + MGP_WSBEiJ_P0050814 Entpd7 protein_coding protein_coding MGP_WSBEiJ_T0050815.1 MGP_WSBEiJ_G0024421.1 mouse_genomes_project 19 42578214 42581169 + Entpd7 protein_coding retained_intron MGP_WSBEiJ_T0050816.1 MGP_WSBEiJ_G0024421.1 mouse_genomes_project 19 42578245 42615139 + Entpd7 protein_coding retained_intron MGP_WSBEiJ_T0050817.1 MGP_WSBEiJ_G0024421.1 mouse_genomes_project 19 42600624 42606101 + Entpd7 protein_coding retained_intron MGP_WSBEiJ_T0050818.1 MGP_WSBEiJ_G0024421.1 mouse_genomes_project 19 42618901 42620668 + Entpd7 protein_coding retained_intron MGP_WSBEiJ_T0049812.1 MGP_WSBEiJ_G0024036.1 mouse_genomes_project 19 3814688 3817971 - Prdx5 protein_coding retained_intron MGP_WSBEiJ_T0049813.1 MGP_WSBEiJ_G0024036.1 mouse_genomes_project 19 3814697 3818099 - MGP_WSBEiJ_P0049813 Prdx5 protein_coding protein_coding MGP_WSBEiJ_T0049814.1 MGP_WSBEiJ_G0024036.1 mouse_genomes_project 19 3814741 3816293 - MGP_WSBEiJ_P0049814 Prdx5 protein_coding protein_coding MGP_WSBEiJ_T0049815.1 MGP_WSBEiJ_G0024036.1 mouse_genomes_project 19 3814837 3817610 - MGP_WSBEiJ_P0049815 Prdx5 protein_coding protein_coding MGP_WSBEiJ_T0050353.1 MGP_WSBEiJ_G0024261.1 mouse_genomes_project 19 21895966 21978546 - MGP_WSBEiJ_P0050353 Tjp2 protein_coding protein_coding MGP_WSBEiJ_T0049965.1 MGP_WSBEiJ_G0024079.1 mouse_genomes_project 19 5857925 5860250 + MGP_WSBEiJ_P0049965 Zbtb3 protein_coding protein_coding MGP_WSBEiJ_T0011286.1 MGP_WSBEiJ_G0009443.1 mouse_genomes_project 19 61014266 61014374 - Gm27940 misc_RNA misc_RNA MGP_WSBEiJ_T0050207.1 MGP_WSBEiJ_G0024183.1 mouse_genomes_project 19 9709111 9731753 + MGP_WSBEiJ_P0050207 Fam111a protein_coding protein_coding MGP_WSBEiJ_T0050208.1 MGP_WSBEiJ_G0024183.1 mouse_genomes_project 19 9709111 9731761 + MGP_WSBEiJ_P0050208 Fam111a protein_coding protein_coding MGP_WSBEiJ_T0050209.1 MGP_WSBEiJ_G0024183.1 mouse_genomes_project 19 9714445 9731755 + MGP_WSBEiJ_P0050209 Fam111a protein_coding protein_coding MGP_WSBEiJ_T0050266.1 MGP_WSBEiJ_G0024226.1 mouse_genomes_project 19 13284858 13306915 - MGP_WSBEiJ_P0050266 Psat1 protein_coding protein_coding MGP_WSBEiJ_T0050267.1 MGP_WSBEiJ_G0024226.1 mouse_genomes_project 19 13285307 13306478 - MGP_WSBEiJ_P0050267 Psat1 protein_coding protein_coding MGP_WSBEiJ_T0050268.1 MGP_WSBEiJ_G0024226.1 mouse_genomes_project 19 13285310 13289905 - Psat1 protein_coding retained_intron MGP_WSBEiJ_T0050269.1 MGP_WSBEiJ_G0024226.1 mouse_genomes_project 19 13295201 13330309 - MGP_WSBEiJ_P0050269 Psat1 protein_coding protein_coding MGP_WSBEiJ_T0050270.1 MGP_WSBEiJ_G0024226.1 mouse_genomes_project 19 13298688 13300187 - Psat1 protein_coding processed_transcript MGP_WSBEiJ_T0050271.1 MGP_WSBEiJ_G0024226.1 mouse_genomes_project 19 13300252 13303268 - Psat1 protein_coding retained_intron MGP_WSBEiJ_T0050272.1 MGP_WSBEiJ_G0024226.1 mouse_genomes_project 19 13302358 13306786 - Psat1 protein_coding retained_intron MGP_WSBEiJ_T0050141.1 MGP_WSBEiJ_G0024146.1 mouse_genomes_project 19 8428152 8446853 + MGP_WSBEiJ_P0050141 Ms4a4a protein_coding protein_coding MGP_WSBEiJ_T0050993.1 MGP_WSBEiJ_G0024475.1 mouse_genomes_project 19 45486395 45590196 + MGP_WSBEiJ_P0050993 Sufu protein_coding protein_coding MGP_WSBEiJ_T0050994.1 MGP_WSBEiJ_G0024475.1 mouse_genomes_project 19 45486417 45587437 + MGP_WSBEiJ_P0050994 Sufu protein_coding protein_coding MGP_WSBEiJ_T0050995.1 MGP_WSBEiJ_G0024475.1 mouse_genomes_project 19 45486503 45557097 + MGP_WSBEiJ_P0050995 Sufu protein_coding protein_coding MGP_WSBEiJ_T0050996.1 MGP_WSBEiJ_G0024475.1 mouse_genomes_project 19 45486525 45578319 + MGP_WSBEiJ_P0050996 Sufu protein_coding protein_coding MGP_WSBEiJ_T0050997.1 MGP_WSBEiJ_G0024475.1 mouse_genomes_project 19 45559295 45577020 + Sufu protein_coding processed_transcript MGP_WSBEiJ_T0050998.1 MGP_WSBEiJ_G0024475.1 mouse_genomes_project 19 45584479 45587371 + Sufu protein_coding retained_intron MGP_WSBEiJ_T0010161.1 MGP_WSBEiJ_G0008318.1 mouse_genomes_project 19 58617494 58617581 - Mir3086 miRNA miRNA MGP_WSBEiJ_T0051088.1 MGP_WSBEiJ_G0024510.1 mouse_genomes_project 19 52733075 52798757 + MGP_WSBEiJ_P0051088 Mxi1 protein_coding protein_coding MGP_WSBEiJ_T0051089.1 MGP_WSBEiJ_G0024510.1 mouse_genomes_project 19 52754040 52796242 + MGP_WSBEiJ_P0051089 Mxi1 protein_coding protein_coding MGP_WSBEiJ_T0050033.1 MGP_WSBEiJ_G0024105.1 mouse_genomes_project 19 7023473 7041625 + MGP_WSBEiJ_P0050033 Fads3 protein_coding protein_coding MGP_WSBEiJ_T0051176.1 MGP_WSBEiJ_G0024536.1 mouse_genomes_project 19 56488560 56526026 + MGP_WSBEiJ_P0051176 Vwa2 protein_coding protein_coding MGP_WSBEiJ_T0049525.1 MGP_WSBEiJ_G0023971.1 mouse_genomes_project 19 2303377 2307728 - MGP_WSBEiJ_P0049525 Tsga10ip protein_coding protein_coding MGP_WSBEiJ_T0049592.1 MGP_WSBEiJ_G0023991.1 mouse_genomes_project 19 2639994 2643968 + MGP_WSBEiJ_P0049592 Kcnk7 protein_coding protein_coding MGP_WSBEiJ_T0011274.1 MGP_WSBEiJ_G0009431.1 mouse_genomes_project 19 5724790 5725137 - Gm22820 misc_RNA misc_RNA MGP_WSBEiJ_T0049719.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337102 3343004 + MGP_WSBEiJ_P0049719 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049720.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337102 3343015 + MGP_WSBEiJ_P0049720 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049721.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337136 3343013 + MGP_WSBEiJ_P0049721 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049722.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337162 3343013 + MGP_WSBEiJ_P0049722 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049723.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337162 3343013 + MGP_WSBEiJ_P0049723 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049724.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337169 3343015 + Men1 protein_coding retained_intron MGP_WSBEiJ_T0049725.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337170 3342907 + MGP_WSBEiJ_P0049725 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049726.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337187 3342587 + MGP_WSBEiJ_P0049726 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049727.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337234 3343013 + MGP_WSBEiJ_P0049727 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049728.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3337584 3342296 + MGP_WSBEiJ_P0049728 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049729.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3339033 3340532 + MGP_WSBEiJ_P0049729 Men1 protein_coding protein_coding MGP_WSBEiJ_T0049730.1 MGP_WSBEiJ_G0024027.1 mouse_genomes_project 19 3341970 3342936 + MGP_WSBEiJ_P0049730 Men1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051027.1 MGP_WSBEiJ_G0024492.1 mouse_genomes_project 19 46314335 46320615 - MGP_WSBEiJ_P0051027 Calhm3 protein_coding protein_coding MGP_WSBEiJ_T0051222.1 MGP_WSBEiJ_G0024547.1 mouse_genomes_project 19 58486291 58495724 - MGP_WSBEiJ_P0051222 1700019N19Rik protein_coding protein_coding MGP_WSBEiJ_T0051223.1 MGP_WSBEiJ_G0024547.1 mouse_genomes_project 19 58486484 58494541 - MGP_WSBEiJ_P0051223 1700019N19Rik protein_coding protein_coding MGP_WSBEiJ_T0003777.1 MGP_WSBEiJ_G0003384.1 mouse_genomes_project 19 3553448 3554586 - Gm14967 antisense antisense MGP_WSBEiJ_T0050647.1 MGP_WSBEiJ_G0024363.1 mouse_genomes_project 19 37595629 37639607 + MGP_WSBEiJ_P0050647 Hells protein_coding protein_coding MGP_WSBEiJ_T0050648.1 MGP_WSBEiJ_G0024363.1 mouse_genomes_project 19 37595744 37605148 + Hells protein_coding retained_intron MGP_WSBEiJ_T0050649.1 MGP_WSBEiJ_G0024363.1 mouse_genomes_project 19 37595888 37609501 + MGP_WSBEiJ_P0050649 Hells protein_coding protein_coding MGP_WSBEiJ_T0050650.1 MGP_WSBEiJ_G0024363.1 mouse_genomes_project 19 37596104 37620196 + Hells protein_coding processed_transcript MGP_WSBEiJ_T0050651.1 MGP_WSBEiJ_G0024363.1 mouse_genomes_project 19 37599222 37605249 + Hells protein_coding retained_intron MGP_WSBEiJ_T0050652.1 MGP_WSBEiJ_G0024363.1 mouse_genomes_project 19 37609275 37617138 + Hells protein_coding processed_transcript MGP_WSBEiJ_T0049328.1 MGP_WSBEiJ_G0023905.1 mouse_genomes_project 19 780458 783899 + MGP_WSBEiJ_P0049328 Acy3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050196.1 MGP_WSBEiJ_G0024172.1 mouse_genomes_project 19 9211985 9213033 - MGP_WSBEiJ_P0050196 Olfr76 protein_coding protein_coding MGP_WSBEiJ_T0049909.1 MGP_WSBEiJ_G0024070.1 mouse_genomes_project 19 5662490 5672788 + MGP_WSBEiJ_P0049909 Slc22a6 protein_coding protein_coding MGP_WSBEiJ_T0050252.1 MGP_WSBEiJ_G0024213.1 mouse_genomes_project 19 10667852 10668756 + MGP_WSBEiJ_P0050252 Olfr1474 protein_coding protein_coding MGP_WSBEiJ_T0006959.1 MGP_WSBEiJ_G0005719.1 mouse_genomes_project 19 2988828 2994632 + Gm10814 lincRNA lincRNA MGP_WSBEiJ_T0049705.1 MGP_WSBEiJ_G0024023.1 mouse_genomes_project 19 3223235 3231343 - MGP_WSBEiJ_P0049705 Ppp2r5b protein_coding protein_coding MGP_WSBEiJ_T0049706.1 MGP_WSBEiJ_G0024023.1 mouse_genomes_project 19 3224755 3225950 - Ppp2r5b protein_coding retained_intron MGP_WSBEiJ_T0049707.1 MGP_WSBEiJ_G0024023.1 mouse_genomes_project 19 3229407 3231314 - Ppp2r5b protein_coding processed_transcript MGP_WSBEiJ_T0050494.1 MGP_WSBEiJ_G0024301.1 mouse_genomes_project 19 28201809 28279847 - MGP_WSBEiJ_P0050494 Gldc protein_coding protein_coding MGP_WSBEiJ_T0050813.1 MGP_WSBEiJ_G0024420.1 mouse_genomes_project 19 42550045 42561062 - MGP_WSBEiJ_P0050813 Slc25a28 protein_coding protein_coding MGP_WSBEiJ_T0098068.1 MGP_WSBEiJ_G0036731.1 mouse_genomes_project 19 23349124 23349228 - Gm26207 snRNA snRNA MGP_WSBEiJ_T0049772.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3403193 3420390 + MGP_WSBEiJ_P0049772 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049773.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3403309 3408824 + MGP_WSBEiJ_P0049773 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049774.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3403599 3408676 + MGP_WSBEiJ_P0049774 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049775.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3405303 3408829 + MGP_WSBEiJ_P0049775 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049776.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3405717 3407621 + Rasgrp2 protein_coding processed_transcript MGP_WSBEiJ_T0049777.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3405723 3420385 + MGP_WSBEiJ_P0049777 Rasgrp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049778.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3405737 3409612 + MGP_WSBEiJ_P0049778 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049779.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3405752 3420396 + MGP_WSBEiJ_P0049779 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049780.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3405754 3410017 + MGP_WSBEiJ_P0049780 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049781.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3405773 3420395 + MGP_WSBEiJ_P0049781 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049782.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3405813 3408803 + MGP_WSBEiJ_P0049782 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049783.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3406885 3407637 + Rasgrp2 protein_coding processed_transcript MGP_WSBEiJ_T0049784.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3406892 3408829 + MGP_WSBEiJ_P0049784 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049785.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3406908 3408829 + MGP_WSBEiJ_P0049785 Rasgrp2 protein_coding protein_coding MGP_WSBEiJ_T0049786.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3406909 3408829 + Rasgrp2 protein_coding processed_transcript MGP_WSBEiJ_T0049787.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3408108 3410163 + Rasgrp2 protein_coding retained_intron MGP_WSBEiJ_T0049788.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3409774 3412249 + Rasgrp2 protein_coding retained_intron MGP_WSBEiJ_T0049789.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3409933 3414856 + Rasgrp2 protein_coding retained_intron MGP_WSBEiJ_T0049790.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3410019 3419219 + Rasgrp2 protein_coding retained_intron MGP_WSBEiJ_T0049791.1 MGP_WSBEiJ_G0024031.1 mouse_genomes_project 19 3413592 3420391 + Rasgrp2 protein_coding processed_transcript MGP_WSBEiJ_T0050354.1 MGP_WSBEiJ_G0024262.1 mouse_genomes_project 19 22084528 22112179 - MGP_WSBEiJ_P0050354 Fxn protein_coding protein_coding MGP_WSBEiJ_T0050355.1 MGP_WSBEiJ_G0024262.1 mouse_genomes_project 19 22084849 22112142 - MGP_WSBEiJ_P0050355 Fxn protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050356.1 MGP_WSBEiJ_G0024262.1 mouse_genomes_project 19 22085140 22108036 - Fxn protein_coding retained_intron MGP_WSBEiJ_T0049517.1 MGP_WSBEiJ_G0023964.1 mouse_genomes_project 19 2180063 2202583 - MGP_WSBEiJ_P0049517 Sf3b2 protein_coding protein_coding MGP_WSBEiJ_T0050254.1 MGP_WSBEiJ_G0024215.1 mouse_genomes_project 19 10922631 10923582 + MGP_WSBEiJ_P0050254 Olfr1490 protein_coding protein_coding MGP_WSBEiJ_T0050253.1 MGP_WSBEiJ_G0024214.1 mouse_genomes_project 19 10900553 10901495 + MGP_WSBEiJ_P0050253 Olfr1489 protein_coding protein_coding MGP_WSBEiJ_T0099311.1 MGP_WSBEiJ_G0037974.1 mouse_genomes_project 19 17656466 17656598 - Gm22684 snoRNA snoRNA MGP_WSBEiJ_T0050071.1 MGP_WSBEiJ_G0024122.1 mouse_genomes_project 19 7645802 7681467 + MGP_WSBEiJ_P0050071 Vwce protein_coding protein_coding MGP_WSBEiJ_T0050980.1 MGP_WSBEiJ_G0024469.1 mouse_genomes_project 19 45386633 45395101 + MGP_WSBEiJ_P0050980 Nfkb2 protein_coding protein_coding MGP_WSBEiJ_T0050981.1 MGP_WSBEiJ_G0024469.1 mouse_genomes_project 19 45387591 45395101 + MGP_WSBEiJ_P0050981 Nfkb2 protein_coding protein_coding MGP_WSBEiJ_T0050135.1 MGP_WSBEiJ_G0024144.1 mouse_genomes_project 19 8349788 8364134 - MGP_WSBEiJ_P0050135 Ms4a14 protein_coding protein_coding MGP_WSBEiJ_T0050962.1 MGP_WSBEiJ_G0024467.1 mouse_genomes_project 19 45212350 45225008 - MGP_WSBEiJ_P0050962 Pitx3 protein_coding protein_coding MGP_WSBEiJ_T0050963.1 MGP_WSBEiJ_G0024467.1 mouse_genomes_project 19 45213160 45213955 - Pitx3 protein_coding retained_intron MGP_WSBEiJ_T0050964.1 MGP_WSBEiJ_G0024467.1 mouse_genomes_project 19 45213697 45217663 - MGP_WSBEiJ_P0050964 Pitx3 protein_coding protein_coding MGP_WSBEiJ_T0049506.1 MGP_WSBEiJ_G0023961.1 mouse_genomes_project 19 1984294 1992208 - MGP_WSBEiJ_P0049506 Rab1b protein_coding protein_coding MGP_WSBEiJ_T0099303.1 MGP_WSBEiJ_G0037966.1 mouse_genomes_project 19 5772463 5772532 + Gm22680 snoRNA snoRNA MGP_WSBEiJ_T0097012.1 MGP_WSBEiJ_G0035693.1 mouse_genomes_project 19 3132595 3132715 + n-R5s19 rRNA rRNA MGP_WSBEiJ_T0006999.1 MGP_WSBEiJ_G0005748.1 mouse_genomes_project 19 45418302 45421556 + Gm26792 lincRNA lincRNA MGP_WSBEiJ_T0006986.1 MGP_WSBEiJ_G0005739.1 mouse_genomes_project 19 35719218 35744620 + A330032B11Rik lincRNA lincRNA MGP_WSBEiJ_T0050662.1 MGP_WSBEiJ_G0024370.1 mouse_genomes_project 19 38281885 38324745 - MGP_WSBEiJ_P0050662 protein_coding protein_coding MGP_WSBEiJ_T0050675.1 MGP_WSBEiJ_G0024376.1 mouse_genomes_project 19 38952272 39013171 - MGP_WSBEiJ_P0050675 Pdlim1 protein_coding protein_coding MGP_WSBEiJ_T0050676.1 MGP_WSBEiJ_G0024376.1 mouse_genomes_project 19 38953643 38962333 - Pdlim1 protein_coding retained_intron MGP_WSBEiJ_T0050677.1 MGP_WSBEiJ_G0024376.1 mouse_genomes_project 19 38962119 39013397 - MGP_WSBEiJ_P0050677 Pdlim1 protein_coding protein_coding MGP_WSBEiJ_T0050678.1 MGP_WSBEiJ_G0024376.1 mouse_genomes_project 19 38986092 39013171 - Pdlim1 protein_coding retained_intron MGP_WSBEiJ_T0050853.1 MGP_WSBEiJ_G0024430.1 mouse_genomes_project 19 43023437 43050605 - MGP_WSBEiJ_P0050853 Cwf19l1 protein_coding protein_coding MGP_WSBEiJ_T0050547.1 MGP_WSBEiJ_G0024325.1 mouse_genomes_project 19 32863416 32906678 - MGP_WSBEiJ_P0050547 Lipa protein_coding protein_coding MGP_WSBEiJ_T0050548.1 MGP_WSBEiJ_G0024325.1 mouse_genomes_project 19 32863416 32906678 - MGP_WSBEiJ_P0050548 Lipa protein_coding protein_coding MGP_WSBEiJ_T0017063.1 MGP_WSBEiJ_G0014793.1 mouse_genomes_project 19 572890 633216 - Gm16066 processed_transcript processed_transcript MGP_WSBEiJ_T0051015.1 MGP_WSBEiJ_G0024484.1 mouse_genomes_project 19 46033953 46119875 - MGP_WSBEiJ_P0051015 Nt5c2 protein_coding protein_coding MGP_WSBEiJ_T0051016.1 MGP_WSBEiJ_G0024484.1 mouse_genomes_project 19 46033953 46111047 - MGP_WSBEiJ_P0051016 Nt5c2 protein_coding protein_coding MGP_WSBEiJ_T0051017.1 MGP_WSBEiJ_G0024484.1 mouse_genomes_project 19 46034950 46167241 - MGP_WSBEiJ_P0051017 Nt5c2 protein_coding protein_coding MGP_WSBEiJ_T0051018.1 MGP_WSBEiJ_G0024484.1 mouse_genomes_project 19 46038625 46045636 - MGP_WSBEiJ_P0051018 Nt5c2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051033.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46691353 46729997 - MGP_WSBEiJ_P0051033 Obfc1 protein_coding protein_coding MGP_WSBEiJ_T0051034.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46691358 46701667 - Obfc1 protein_coding processed_transcript MGP_WSBEiJ_T0051035.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46700098 46729914 - MGP_WSBEiJ_P0051035 Obfc1 protein_coding protein_coding MGP_WSBEiJ_T0051036.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46715040 46729842 - Obfc1 protein_coding processed_transcript MGP_WSBEiJ_T0051037.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46716985 46729774 - Obfc1 protein_coding processed_transcript MGP_WSBEiJ_T0051038.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46717114 46729972 - Obfc1 protein_coding retained_intron MGP_WSBEiJ_T0051039.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46717619 46730507 - MGP_WSBEiJ_P0051039 Obfc1 protein_coding protein_coding MGP_WSBEiJ_T0051040.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46725223 46729140 - Obfc1 protein_coding processed_transcript MGP_WSBEiJ_T0051041.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46728792 46729924 - Obfc1 protein_coding retained_intron MGP_WSBEiJ_T0051042.1 MGP_WSBEiJ_G0024496.1 mouse_genomes_project 19 46729167 46729902 - Obfc1 protein_coding processed_transcript MGP_WSBEiJ_T0049524.1 MGP_WSBEiJ_G0023970.1 mouse_genomes_project 19 2291073 2302032 - MGP_WSBEiJ_P0049524 Sart1 protein_coding protein_coding MGP_WSBEiJ_T0050044.1 MGP_WSBEiJ_G0024110.1 mouse_genomes_project 19 7201721 7235049 - MGP_WSBEiJ_P0050044 Myrf protein_coding protein_coding MGP_WSBEiJ_T0050045.1 MGP_WSBEiJ_G0024110.1 mouse_genomes_project 19 7202744 7235049 - Myrf protein_coding retained_intron MGP_WSBEiJ_T0050046.1 MGP_WSBEiJ_G0024110.1 mouse_genomes_project 19 7203143 7235046 - MGP_WSBEiJ_P0050046 Myrf protein_coding protein_coding MGP_WSBEiJ_T0050047.1 MGP_WSBEiJ_G0024110.1 mouse_genomes_project 19 7203739 7210776 - MGP_WSBEiJ_P0050047 Myrf protein_coding protein_coding MGP_WSBEiJ_T0050048.1 MGP_WSBEiJ_G0024110.1 mouse_genomes_project 19 7203824 7234905 - MGP_WSBEiJ_P0050048 Myrf protein_coding protein_coding MGP_WSBEiJ_T0050049.1 MGP_WSBEiJ_G0024110.1 mouse_genomes_project 19 7219323 7235049 - Myrf protein_coding retained_intron MGP_WSBEiJ_T0050437.1 MGP_WSBEiJ_G0024283.1 mouse_genomes_project 19 27014477 27017333 + MGP_WSBEiJ_P0050437 Plpp6 protein_coding protein_coding MGP_WSBEiJ_T0050020.1 MGP_WSBEiJ_G0024100.1 mouse_genomes_project 19 6820748 6826001 + MGP_WSBEiJ_P0050020 Scgb2a2 protein_coding protein_coding MGP_WSBEiJ_T0013033.1 MGP_WSBEiJ_G0011163.1 mouse_genomes_project 19 4672086 4673202 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050833.1 MGP_WSBEiJ_G0024426.1 mouse_genomes_project 19 42857442 42889200 - MGP_WSBEiJ_P0050833 Cpn1 protein_coding protein_coding MGP_WSBEiJ_T0050834.1 MGP_WSBEiJ_G0024426.1 mouse_genomes_project 19 42863199 42871543 - Cpn1 protein_coding retained_intron MGP_WSBEiJ_T0003789.1 MGP_WSBEiJ_G0003393.1 mouse_genomes_project 19 36923505 36942013 - Gm42723 antisense antisense MGP_WSBEiJ_T0003790.1 MGP_WSBEiJ_G0003393.1 mouse_genomes_project 19 36940954 36941998 - Gm42723 antisense antisense MGP_WSBEiJ_T0050289.1 MGP_WSBEiJ_G0024235.1 mouse_genomes_project 19 14931650 15359722 - MGP_WSBEiJ_P0050289 Pcsk5 protein_coding protein_coding MGP_WSBEiJ_T0050290.1 MGP_WSBEiJ_G0024235.1 mouse_genomes_project 19 15065648 15359722 - MGP_WSBEiJ_P0050290 Pcsk5 protein_coding protein_coding MGP_WSBEiJ_T0050291.1 MGP_WSBEiJ_G0024235.1 mouse_genomes_project 19 15065656 15359246 - MGP_WSBEiJ_P0050291 Pcsk5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051235.1 MGP_WSBEiJ_G0024555.1 mouse_genomes_project 19 59178109 59185058 + MGP_WSBEiJ_P0051235 Emx2 protein_coding protein_coding MGP_WSBEiJ_T0051236.1 MGP_WSBEiJ_G0024555.1 mouse_genomes_project 19 59179258 59185054 + MGP_WSBEiJ_P0051236 Emx2 protein_coding protein_coding MGP_WSBEiJ_T0051237.1 MGP_WSBEiJ_G0024555.1 mouse_genomes_project 19 59182501 59183899 + Emx2 protein_coding processed_transcript MGP_WSBEiJ_T0017086.1 MGP_WSBEiJ_G0014798.1 mouse_genomes_project 19 3414587 3423788 - Gm14965 processed_transcript antisense MGP_WSBEiJ_T0017087.1 MGP_WSBEiJ_G0014798.1 mouse_genomes_project 19 3421990 3423788 - Gm14965 processed_transcript retained_intron MGP_WSBEiJ_T0049717.1 MGP_WSBEiJ_G0024026.1 mouse_genomes_project 19 3305823 3325945 + MGP_WSBEiJ_P0049717 Cdc42bpg protein_coding protein_coding MGP_WSBEiJ_T0049718.1 MGP_WSBEiJ_G0024026.1 mouse_genomes_project 19 3322100 3322525 + Cdc42bpg protein_coding retained_intron MGP_WSBEiJ_T0049753.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3365834 3380174 + MGP_WSBEiJ_P0049753 Sf1 protein_coding protein_coding MGP_WSBEiJ_T0049754.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3365863 3379347 + MGP_WSBEiJ_P0049754 Sf1 protein_coding protein_coding MGP_WSBEiJ_T0049755.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3365954 3378656 + MGP_WSBEiJ_P0049755 Sf1 protein_coding protein_coding MGP_WSBEiJ_T0049756.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3366066 3368100 + Sf1 protein_coding retained_intron MGP_WSBEiJ_T0049757.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3366066 3379346 + MGP_WSBEiJ_P0049757 Sf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049758.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3366066 3379340 + MGP_WSBEiJ_P0049758 Sf1 protein_coding protein_coding MGP_WSBEiJ_T0049759.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3366107 3370929 + Sf1 protein_coding retained_intron MGP_WSBEiJ_T0049760.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3366338 3374337 + MGP_WSBEiJ_P0049760 Sf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049761.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3366701 3374763 + MGP_WSBEiJ_P0049761 Sf1 protein_coding protein_coding MGP_WSBEiJ_T0049762.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3372263 3374236 + Sf1 protein_coding processed_transcript MGP_WSBEiJ_T0049763.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3372856 3373838 + Sf1 protein_coding retained_intron MGP_WSBEiJ_T0049764.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3374556 3375065 + Sf1 protein_coding retained_intron MGP_WSBEiJ_T0049765.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3375764 3378798 + MGP_WSBEiJ_P0049765 Sf1 protein_coding protein_coding MGP_WSBEiJ_T0049766.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3376153 3378656 + MGP_WSBEiJ_P0049766 Sf1 protein_coding protein_coding MGP_WSBEiJ_T0049767.1 MGP_WSBEiJ_G0024029.1 mouse_genomes_project 19 3376272 3377924 + MGP_WSBEiJ_P0049767 Sf1 protein_coding protein_coding MGP_WSBEiJ_T0050034.1 MGP_WSBEiJ_G0024106.1 mouse_genomes_project 19 7047413 7085228 - MGP_WSBEiJ_P0050034 Fads2 protein_coding protein_coding MGP_WSBEiJ_T0050243.1 MGP_WSBEiJ_G0024204.1 mouse_genomes_project 19 10333247 10334186 + MGP_WSBEiJ_P0050243 Olfr1461 protein_coding protein_coding MGP_WSBEiJ_T0050720.1 MGP_WSBEiJ_G0024387.1 mouse_genomes_project 19 39997760 40051672 - MGP_WSBEiJ_P0050720 Tm9sf3 protein_coding protein_coding MGP_WSBEiJ_T0007011.1 MGP_WSBEiJ_G0005757.1 mouse_genomes_project 19 59628337 59633176 - Gm17203 lincRNA lincRNA MGP_WSBEiJ_T0050661.1 MGP_WSBEiJ_G0024369.1 mouse_genomes_project 19 38281885 38324824 - MGP_WSBEiJ_P0050661 protein_coding protein_coding MGP_WSBEiJ_T0050664.1 MGP_WSBEiJ_G0024369.1 mouse_genomes_project 19 38316712 38324759 - protein_coding processed_transcript MGP_WSBEiJ_T0050665.1 MGP_WSBEiJ_G0024369.1 mouse_genomes_project 19 38316785 38324754 - MGP_WSBEiJ_P0050665 protein_coding protein_coding MGP_WSBEiJ_T0017134.1 MGP_WSBEiJ_G0014811.1 mouse_genomes_project 19 59678333 59682997 + Gm4219 processed_transcript processed_transcript MGP_WSBEiJ_T0011280.1 MGP_WSBEiJ_G0009437.1 mouse_genomes_project 19 31203767 31204126 - Gm22482 misc_RNA misc_RNA MGP_WSBEiJ_T0097014.1 MGP_WSBEiJ_G0035695.1 mouse_genomes_project 19 34064953 34065084 - Gm22853 rRNA rRNA MGP_WSBEiJ_T0049563.1 MGP_WSBEiJ_G0023980.1 mouse_genomes_project 19 2415348 2418893 + MGP_WSBEiJ_P0049563 Cfl1 protein_coding protein_coding MGP_WSBEiJ_T0051031.1 MGP_WSBEiJ_G0024495.1 mouse_genomes_project 19 46443273 46655399 - MGP_WSBEiJ_P0051031 Sh3pxd2a protein_coding protein_coding MGP_WSBEiJ_T0051032.1 MGP_WSBEiJ_G0024495.1 mouse_genomes_project 19 46443273 46655399 - MGP_WSBEiJ_P0051032 Sh3pxd2a protein_coding protein_coding MGP_WSBEiJ_T0050205.1 MGP_WSBEiJ_G0024181.1 mouse_genomes_project 19 9598362 9602867 + MGP_WSBEiJ_P0050205 Mpeg1 protein_coding protein_coding MGP_WSBEiJ_T0051020.1 MGP_WSBEiJ_G0024486.1 mouse_genomes_project 19 46187856 46205087 - MGP_WSBEiJ_P0051020 Pcgf6 protein_coding protein_coding MGP_WSBEiJ_T0050203.1 MGP_WSBEiJ_G0024179.1 mouse_genomes_project 19 9564750 9565838 + MGP_WSBEiJ_P0050203 Olfr1441 protein_coding protein_coding MGP_WSBEiJ_T0050546.1 MGP_WSBEiJ_G0024324.1 mouse_genomes_project 19 32844775 32846125 - MGP_WSBEiJ_P0050546 Ch25h protein_coding protein_coding MGP_WSBEiJ_T0050280.1 MGP_WSBEiJ_G0024231.1 mouse_genomes_project 19 14322807 14324322 - MGP_WSBEiJ_P0050280 Foxb2 protein_coding protein_coding MGP_WSBEiJ_T0050069.1 MGP_WSBEiJ_G0024120.1 mouse_genomes_project 19 7598640 7611927 - MGP_WSBEiJ_P0050069 Tkfc protein_coding protein_coding MGP_WSBEiJ_T0051158.1 MGP_WSBEiJ_G0024531.1 mouse_genomes_project 19 56129333 56148282 - MGP_WSBEiJ_P0051158 Dclre1a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051159.1 MGP_WSBEiJ_G0024531.1 mouse_genomes_project 19 56129335 56147301 - Dclre1a protein_coding retained_intron MGP_WSBEiJ_T0051160.1 MGP_WSBEiJ_G0024531.1 mouse_genomes_project 19 56129335 56148351 - MGP_WSBEiJ_P0051160 Dclre1a protein_coding protein_coding MGP_WSBEiJ_T0051161.1 MGP_WSBEiJ_G0024531.1 mouse_genomes_project 19 56129748 56137549 - Dclre1a protein_coding retained_intron MGP_WSBEiJ_T0051162.1 MGP_WSBEiJ_G0024531.1 mouse_genomes_project 19 56140175 56141701 - Dclre1a protein_coding processed_transcript MGP_WSBEiJ_T0051163.1 MGP_WSBEiJ_G0024531.1 mouse_genomes_project 19 56147003 56148176 - MGP_WSBEiJ_P0051163 Dclre1a protein_coding protein_coding MGP_WSBEiJ_T0051090.1 MGP_WSBEiJ_G0024511.1 mouse_genomes_project 19 52794513 52794714 - MGP_WSBEiJ_P0051090 Gm10197 protein_coding protein_coding MGP_WSBEiJ_T0049878.1 MGP_WSBEiJ_G0024059.1 mouse_genomes_project 19 4313244 4340942 - MGP_WSBEiJ_P0049878 AI846148 protein_coding protein_coding MGP_WSBEiJ_T0097018.1 MGP_WSBEiJ_G0035699.1 mouse_genomes_project 19 47459865 47459976 - Gm23857 rRNA rRNA MGP_WSBEiJ_T0050377.1 MGP_WSBEiJ_G0024273.1 mouse_genomes_project 19 23591604 23598143 + MGP_WSBEiJ_P0050377 Dmrt2 protein_coding protein_coding MGP_WSBEiJ_T0013046.1 MGP_WSBEiJ_G0011176.1 mouse_genomes_project 19 25855821 25856261 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010114.1 MGP_WSBEiJ_G0008271.1 mouse_genomes_project 19 33133 33197 + Mir6984 miRNA miRNA MGP_WSBEiJ_T0099322.1 MGP_WSBEiJ_G0037985.1 mouse_genomes_project 19 46908648 46908764 + Gm26085 snoRNA snoRNA MGP_WSBEiJ_T0099302.1 MGP_WSBEiJ_G0037965.1 mouse_genomes_project 19 5772214 5772279 + Gm22744 snoRNA snoRNA MGP_WSBEiJ_T0050655.1 MGP_WSBEiJ_G0024366.1 mouse_genomes_project 19 37746249 37781008 + MGP_WSBEiJ_P0050655 Cyp2c65 protein_coding protein_coding MGP_WSBEiJ_T0049824.1 MGP_WSBEiJ_G0024041.1 mouse_genomes_project 19 3854752 3858191 - MGP_WSBEiJ_P0049824 Gpr137 protein_coding protein_coding MGP_WSBEiJ_T0049825.1 MGP_WSBEiJ_G0024041.1 mouse_genomes_project 19 3854753 3859134 - MGP_WSBEiJ_P0049825 Gpr137 protein_coding protein_coding MGP_WSBEiJ_T0049826.1 MGP_WSBEiJ_G0024041.1 mouse_genomes_project 19 3854753 3857877 - MGP_WSBEiJ_P0049826 Gpr137 protein_coding protein_coding MGP_WSBEiJ_T0049827.1 MGP_WSBEiJ_G0024041.1 mouse_genomes_project 19 3854753 3858163 - MGP_WSBEiJ_P0049827 Gpr137 protein_coding protein_coding MGP_WSBEiJ_T0049828.1 MGP_WSBEiJ_G0024041.1 mouse_genomes_project 19 3854753 3857877 - MGP_WSBEiJ_P0049828 Gpr137 protein_coding protein_coding MGP_WSBEiJ_T0099320.1 MGP_WSBEiJ_G0037983.1 mouse_genomes_project 19 43028771 43028917 - Gm24336 snoRNA snoRNA MGP_WSBEiJ_T0098072.1 MGP_WSBEiJ_G0036735.1 mouse_genomes_project 19 34884576 34884682 - Gm23170 snRNA snRNA MGP_WSBEiJ_T0010124.1 MGP_WSBEiJ_G0008281.1 mouse_genomes_project 19 3576983 3577109 + Gm26460 miRNA miRNA MGP_WSBEiJ_T0050277.1 MGP_WSBEiJ_G0024229.1 mouse_genomes_project 19 13849943 14040394 + MGP_WSBEiJ_P0050277 Gna14 protein_coding protein_coding MGP_WSBEiJ_T0006990.1 MGP_WSBEiJ_G0005742.1 mouse_genomes_project 19 42490992 42492543 - Gm20467 lincRNA lincRNA MGP_WSBEiJ_T0007001.1 MGP_WSBEiJ_G0005750.1 mouse_genomes_project 19 52479479 52487655 + 1700054A03Rik lincRNA lincRNA MGP_WSBEiJ_T0007002.1 MGP_WSBEiJ_G0005750.1 mouse_genomes_project 19 52479513 52487655 + 1700054A03Rik lincRNA lincRNA MGP_WSBEiJ_T0050316.1 MGP_WSBEiJ_G0024243.1 mouse_genomes_project 19 18255922 18305414 + MGP_WSBEiJ_P0050316 Aldh1a1 protein_coding protein_coding MGP_WSBEiJ_T0050009.1 MGP_WSBEiJ_G0024095.1 mouse_genomes_project 19 6023666 6037191 + MGP_WSBEiJ_P0050009 Tut1 protein_coding protein_coding MGP_WSBEiJ_T0013040.1 MGP_WSBEiJ_G0011170.1 mouse_genomes_project 19 12821997 12822275 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049684.1 MGP_WSBEiJ_G0024017.1 mouse_genomes_project 19 3104077 3106660 - MGP_WSBEiJ_P0049684 Sac3d1 protein_coding protein_coding MGP_WSBEiJ_T0050001.1 MGP_WSBEiJ_G0024093.1 mouse_genomes_project 19 5995654 6010039 + MGP_WSBEiJ_P0050001 Eml3 protein_coding protein_coding MGP_WSBEiJ_T0050002.1 MGP_WSBEiJ_G0024093.1 mouse_genomes_project 19 5995667 6009809 + MGP_WSBEiJ_P0050002 Eml3 protein_coding unknown_likely_coding MGP_WSBEiJ_T0098059.1 MGP_WSBEiJ_G0036722.1 mouse_genomes_project 19 247246 247351 + Gm23940 snRNA snRNA MGP_WSBEiJ_T0006971.1 MGP_WSBEiJ_G0005730.1 mouse_genomes_project 19 21865608 21867309 + 1700021P04Rik lincRNA lincRNA MGP_WSBEiJ_T0010146.1 MGP_WSBEiJ_G0008303.1 mouse_genomes_project 19 40371984 40372123 + Mir8091 miRNA miRNA MGP_WSBEiJ_T0049474.1 MGP_WSBEiJ_G0023946.1 mouse_genomes_project 19 1719147 1721485 - Actn3 protein_coding processed_transcript MGP_WSBEiJ_T0049475.1 MGP_WSBEiJ_G0023946.1 mouse_genomes_project 19 1719147 1745901 - MGP_WSBEiJ_P0049475 Actn3 protein_coding protein_coding MGP_WSBEiJ_T0050368.1 MGP_WSBEiJ_G0024269.1 mouse_genomes_project 19 22851200 23076259 + MGP_WSBEiJ_P0050368 Dock8 protein_coding protein_coding MGP_WSBEiJ_T0050715.1 MGP_WSBEiJ_G0024384.1 mouse_genomes_project 19 39808820 39839992 + MGP_WSBEiJ_P0050715 Dntt protein_coding protein_coding MGP_WSBEiJ_T0050716.1 MGP_WSBEiJ_G0024384.1 mouse_genomes_project 19 39808820 39839992 + MGP_WSBEiJ_P0050716 Dntt protein_coding protein_coding MGP_WSBEiJ_T0006976.1 MGP_WSBEiJ_G0005733.1 mouse_genomes_project 19 26708166 26752917 + D930032P07Rik lincRNA lincRNA MGP_WSBEiJ_T0006977.1 MGP_WSBEiJ_G0005733.1 mouse_genomes_project 19 26708170 26752642 + D930032P07Rik lincRNA lincRNA MGP_WSBEiJ_T0050300.1 MGP_WSBEiJ_G0024238.1 mouse_genomes_project 19 16223652 16259256 + MGP_WSBEiJ_P0050300 Carnmt1 protein_coding protein_coding MGP_WSBEiJ_T0049822.1 MGP_WSBEiJ_G0024039.1 mouse_genomes_project 19 3836050 3839048 - MGP_WSBEiJ_P0049822 Tex40 protein_coding protein_coding MGP_WSBEiJ_T0049521.1 MGP_WSBEiJ_G0023968.1 mouse_genomes_project 19 2278138 2280144 - MGP_WSBEiJ_P0049521 Banf1 protein_coding protein_coding MGP_WSBEiJ_T0049522.1 MGP_WSBEiJ_G0023968.1 mouse_genomes_project 19 2278138 2279846 - MGP_WSBEiJ_P0049522 Banf1 protein_coding protein_coding MGP_WSBEiJ_T0050724.1 MGP_WSBEiJ_G0024390.1 mouse_genomes_project 19 40365697 40369864 + MGP_WSBEiJ_P0050724 Gm340 protein_coding protein_coding MGP_WSBEiJ_T0011271.1 MGP_WSBEiJ_G0009428.1 mouse_genomes_project 19 2790329 2790481 - Gm27533 misc_RNA misc_RNA MGP_WSBEiJ_T0049504.1 MGP_WSBEiJ_G0023959.1 mouse_genomes_project 19 1973155 1977811 + MGP_WSBEiJ_P0049504 Yif1a protein_coding protein_coding MGP_WSBEiJ_T0010162.1 MGP_WSBEiJ_G0008319.1 mouse_genomes_project 19 60350584 60350673 + Gm25238 miRNA miRNA MGP_WSBEiJ_T0017064.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935840 942185 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017065.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935865 941626 + Tmem134 processed_transcript retained_intron MGP_WSBEiJ_T0017066.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935865 941627 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017067.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935865 941344 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017068.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935865 941627 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017069.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935865 941627 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017070.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935866 942207 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017071.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935866 942205 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017072.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935866 942185 + Tmem134 processed_transcript retained_intron MGP_WSBEiJ_T0017073.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935881 941627 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017074.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935885 941635 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017075.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935893 941630 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017076.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935895 941627 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017077.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935895 937645 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017078.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 935935 941632 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0017079.1 MGP_WSBEiJ_G0014794.1 mouse_genomes_project 19 937477 941157 + Tmem134 processed_transcript processed_transcript MGP_WSBEiJ_T0049526.1 MGP_WSBEiJ_G0023972.1 mouse_genomes_project 19 2344188 2345309 - Drap1 protein_coding retained_intron MGP_WSBEiJ_T0049527.1 MGP_WSBEiJ_G0023972.1 mouse_genomes_project 19 2344192 2345606 - Drap1 protein_coding retained_intron MGP_WSBEiJ_T0049528.1 MGP_WSBEiJ_G0023972.1 mouse_genomes_project 19 2344212 2346173 - Drap1 protein_coding retained_intron MGP_WSBEiJ_T0049529.1 MGP_WSBEiJ_G0023972.1 mouse_genomes_project 19 2344212 2346307 - MGP_WSBEiJ_P0049529 Drap1 protein_coding protein_coding MGP_WSBEiJ_T0049530.1 MGP_WSBEiJ_G0023972.1 mouse_genomes_project 19 2344246 2345467 - Drap1 protein_coding retained_intron MGP_WSBEiJ_T0049531.1 MGP_WSBEiJ_G0023972.1 mouse_genomes_project 19 2344305 2346100 - MGP_WSBEiJ_P0049531 Drap1 protein_coding protein_coding MGP_WSBEiJ_T0049532.1 MGP_WSBEiJ_G0023972.1 mouse_genomes_project 19 2344992 2346165 - Drap1 protein_coding retained_intron MGP_WSBEiJ_T0049498.1 MGP_WSBEiJ_G0023957.1 mouse_genomes_project 19 1949338 1951895 + MGP_WSBEiJ_P0049498 Cd248 protein_coding protein_coding MGP_WSBEiJ_T0017131.1 MGP_WSBEiJ_G0014809.1 mouse_genomes_project 19 41615844 41618258 + Gm16244 processed_transcript processed_transcript MGP_WSBEiJ_T0017132.1 MGP_WSBEiJ_G0014809.1 mouse_genomes_project 19 41615922 41617076 + Gm16244 processed_transcript processed_transcript MGP_WSBEiJ_T0013036.1 MGP_WSBEiJ_G0011166.1 mouse_genomes_project 19 8458060 8459118 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049451.1 MGP_WSBEiJ_G0023937.1 mouse_genomes_project 19 1472222 1546630 - MGP_WSBEiJ_P0049451 Gm960 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049452.1 MGP_WSBEiJ_G0023937.1 mouse_genomes_project 19 1472242 1547092 - MGP_WSBEiJ_P0049452 Gm960 protein_coding protein_coding MGP_WSBEiJ_T0049453.1 MGP_WSBEiJ_G0023937.1 mouse_genomes_project 19 1494532 1546739 - MGP_WSBEiJ_P0049453 Gm960 protein_coding protein_coding MGP_WSBEiJ_T0050250.1 MGP_WSBEiJ_G0024211.1 mouse_genomes_project 19 10623769 10624673 + MGP_WSBEiJ_P0050250 protein_coding protein_coding MGP_WSBEiJ_T0050760.1 MGP_WSBEiJ_G0024400.1 mouse_genomes_project 19 40784881 40842461 + MGP_WSBEiJ_P0050760 Ubtd1 protein_coding protein_coding MGP_WSBEiJ_T0099319.1 MGP_WSBEiJ_G0037982.1 mouse_genomes_project 19 41530012 41530138 - Gm25216 snoRNA snoRNA MGP_WSBEiJ_T0050769.1 MGP_WSBEiJ_G0024406.1 mouse_genomes_project 19 40937232 40943019 - MGP_WSBEiJ_P0050769 Avpi1 protein_coding protein_coding MGP_WSBEiJ_T0050770.1 MGP_WSBEiJ_G0024406.1 mouse_genomes_project 19 40938738 40942949 - MGP_WSBEiJ_P0050770 Avpi1 protein_coding protein_coding MGP_WSBEiJ_T0011276.1 MGP_WSBEiJ_G0009433.1 mouse_genomes_project 19 14525884 14526145 - Gm27796 misc_RNA misc_RNA MGP_WSBEiJ_T0011285.1 MGP_WSBEiJ_G0009442.1 mouse_genomes_project 19 58487096 58487180 - Gm22561 misc_RNA misc_RNA MGP_WSBEiJ_T0051028.1 MGP_WSBEiJ_G0024493.1 mouse_genomes_project 19 46344050 46344716 - MGP_WSBEiJ_P0051028 Gm6970 protein_coding protein_coding MGP_WSBEiJ_T0003804.1 MGP_WSBEiJ_G0003405.1 mouse_genomes_project 19 58975709 58977621 - Gm29261 antisense antisense MGP_WSBEiJ_T0050166.1 MGP_WSBEiJ_G0024154.1 mouse_genomes_project 19 8649247 8657341 - MGP_WSBEiJ_P0050166 Ms4a2 protein_coding protein_coding MGP_WSBEiJ_T0050167.1 MGP_WSBEiJ_G0024154.1 mouse_genomes_project 19 8650681 8657376 - MGP_WSBEiJ_P0050167 Ms4a2 protein_coding protein_coding MGP_WSBEiJ_T0050168.1 MGP_WSBEiJ_G0024154.1 mouse_genomes_project 19 8650917 8657300 - MGP_WSBEiJ_P0050168 Ms4a2 protein_coding protein_coding MGP_WSBEiJ_T0050169.1 MGP_WSBEiJ_G0024154.1 mouse_genomes_project 19 8651197 8657316 - MGP_WSBEiJ_P0050169 Ms4a2 protein_coding protein_coding MGP_WSBEiJ_T0050170.1 MGP_WSBEiJ_G0024154.1 mouse_genomes_project 19 8652651 8657345 - Ms4a2 protein_coding processed_transcript MGP_WSBEiJ_T0050118.1 MGP_WSBEiJ_G0024138.1 mouse_genomes_project 19 8136613 8170899 - MGP_WSBEiJ_P0050118 1700017D01Rik protein_coding protein_coding MGP_WSBEiJ_T0050119.1 MGP_WSBEiJ_G0024138.1 mouse_genomes_project 19 8148317 8150771 - 1700017D01Rik protein_coding retained_intron MGP_WSBEiJ_T0050529.1 MGP_WSBEiJ_G0024315.1 mouse_genomes_project 19 31990234 32001355 - MGP_WSBEiJ_P0050529 Lipo1 protein_coding protein_coding MGP_WSBEiJ_T0010156.1 MGP_WSBEiJ_G0008313.1 mouse_genomes_project 19 48965751 48965830 - Gm27935 miRNA miRNA MGP_WSBEiJ_T0010143.1 MGP_WSBEiJ_G0008300.1 mouse_genomes_project 19 33374626 33374700 + Mir1950 miRNA miRNA MGP_WSBEiJ_T0050072.1 MGP_WSBEiJ_G0024123.1 mouse_genomes_project 19 7686821 7706537 - MGP_WSBEiJ_P0050072 Pga5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050073.1 MGP_WSBEiJ_G0024123.1 mouse_genomes_project 19 7686825 7697004 - MGP_WSBEiJ_P0050073 Pga5 protein_coding protein_coding MGP_WSBEiJ_T0050347.1 MGP_WSBEiJ_G0024255.1 mouse_genomes_project 19 21063558 21228754 - MGP_WSBEiJ_P0050347 Mamdc2 protein_coding protein_coding MGP_WSBEiJ_T0050235.1 MGP_WSBEiJ_G0024196.1 mouse_genomes_project 19 10083024 10083969 - MGP_WSBEiJ_P0050235 Olfr1448 protein_coding protein_coding MGP_WSBEiJ_T0049387.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 968402 974768 - MGP_WSBEiJ_P0049387 Rps6kb2 protein_coding protein_coding MGP_WSBEiJ_T0049388.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 968408 974745 - MGP_WSBEiJ_P0049388 Rps6kb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049389.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 968411 974765 - Rps6kb2 protein_coding retained_intron MGP_WSBEiJ_T0049390.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 968411 969766 - Rps6kb2 protein_coding retained_intron MGP_WSBEiJ_T0049391.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 968411 974749 - MGP_WSBEiJ_P0049391 Rps6kb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049392.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 968599 973779 - Rps6kb2 protein_coding processed_transcript MGP_WSBEiJ_T0049393.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 968599 974734 - MGP_WSBEiJ_P0049393 Rps6kb2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049394.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 973708 974749 - Rps6kb2 protein_coding processed_transcript MGP_WSBEiJ_T0049395.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 973965 974779 - Rps6kb2 protein_coding retained_intron MGP_WSBEiJ_T0049396.1 MGP_WSBEiJ_G0023920.1 mouse_genomes_project 19 974263 974803 - Rps6kb2 protein_coding processed_transcript MGP_WSBEiJ_T0099315.1 MGP_WSBEiJ_G0037978.1 mouse_genomes_project 19 25689103 25689235 - Gm24782 snoRNA snoRNA MGP_WSBEiJ_T0013049.1 MGP_WSBEiJ_G0011179.1 mouse_genomes_project 19 26852578 26853375 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049895.1 MGP_WSBEiJ_G0024064.1 mouse_genomes_project 19 4573099 4583610 - MGP_WSBEiJ_P0049895 Lgals12 protein_coding protein_coding MGP_WSBEiJ_T0049896.1 MGP_WSBEiJ_G0024064.1 mouse_genomes_project 19 4573101 4583595 - MGP_WSBEiJ_P0049896 Lgals12 protein_coding protein_coding MGP_WSBEiJ_T0049897.1 MGP_WSBEiJ_G0024064.1 mouse_genomes_project 19 4573154 4583520 - MGP_WSBEiJ_P0049897 Lgals12 protein_coding protein_coding MGP_WSBEiJ_T0050206.1 MGP_WSBEiJ_G0024182.1 mouse_genomes_project 19 9603920 9640529 - MGP_WSBEiJ_P0050206 Dtx4 protein_coding protein_coding MGP_WSBEiJ_T0050174.1 MGP_WSBEiJ_G0024156.1 mouse_genomes_project 19 8685961 8697983 - MGP_WSBEiJ_P0050174 Oosp2 protein_coding protein_coding MGP_WSBEiJ_T0050175.1 MGP_WSBEiJ_G0024156.1 mouse_genomes_project 19 8685962 8698026 - MGP_WSBEiJ_P0050175 Oosp2 protein_coding protein_coding MGP_WSBEiJ_T0098062.1 MGP_WSBEiJ_G0036725.1 mouse_genomes_project 19 10474054 10474161 - Gm22443 snRNA snRNA MGP_WSBEiJ_T0050554.1 MGP_WSBEiJ_G0024329.1 mouse_genomes_project 19 32997500 32999476 + MGP_WSBEiJ_P0050554 protein_coding protein_coding MGP_WSBEiJ_T0049377.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 960259 965675 + MGP_WSBEiJ_P0049377 Coro1b protein_coding protein_coding MGP_WSBEiJ_T0049378.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 960259 962146 + MGP_WSBEiJ_P0049378 Coro1b protein_coding protein_coding MGP_WSBEiJ_T0049379.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 960268 961196 + Coro1b protein_coding retained_intron MGP_WSBEiJ_T0049380.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 960272 961276 + Coro1b protein_coding retained_intron MGP_WSBEiJ_T0049381.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 960301 963141 + Coro1b protein_coding processed_transcript MGP_WSBEiJ_T0049382.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 960304 961895 + Coro1b protein_coding retained_intron MGP_WSBEiJ_T0049383.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 962184 964448 + Coro1b protein_coding retained_intron MGP_WSBEiJ_T0049384.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 963011 965084 + Coro1b protein_coding retained_intron MGP_WSBEiJ_T0049385.1 MGP_WSBEiJ_G0023918.1 mouse_genomes_project 19 963221 965301 + Coro1b protein_coding retained_intron MGP_WSBEiJ_T0050226.1 MGP_WSBEiJ_G0024189.1 mouse_genomes_project 19 9915063 9950492 - MGP_WSBEiJ_P0050226 Zfp91 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050228.1 MGP_WSBEiJ_G0024189.1 mouse_genomes_project 19 9918423 9950492 - MGP_WSBEiJ_P0050228 Zfp91 protein_coding protein_coding MGP_WSBEiJ_T0050229.1 MGP_WSBEiJ_G0024189.1 mouse_genomes_project 19 9922920 9944763 - Zfp91 protein_coding retained_intron MGP_WSBEiJ_T0049471.1 MGP_WSBEiJ_G0023943.1 mouse_genomes_project 19 1681070 1695011 - MGP_WSBEiJ_P0049471 Ccs protein_coding protein_coding MGP_WSBEiJ_T0049708.1 MGP_WSBEiJ_G0024024.1 mouse_genomes_project 19 3237128 3259741 + MGP_WSBEiJ_P0049708 Atg2a protein_coding protein_coding MGP_WSBEiJ_T0049709.1 MGP_WSBEiJ_G0024024.1 mouse_genomes_project 19 3240918 3259701 + MGP_WSBEiJ_P0049709 Atg2a protein_coding protein_coding MGP_WSBEiJ_T0049710.1 MGP_WSBEiJ_G0024024.1 mouse_genomes_project 19 3247508 3249666 + Atg2a protein_coding retained_intron MGP_WSBEiJ_T0049711.1 MGP_WSBEiJ_G0024024.1 mouse_genomes_project 19 3253779 3257032 + Atg2a protein_coding retained_intron MGP_WSBEiJ_T0049712.1 MGP_WSBEiJ_G0024024.1 mouse_genomes_project 19 3255753 3257537 + Atg2a protein_coding retained_intron MGP_WSBEiJ_T0013051.1 MGP_WSBEiJ_G0011181.1 mouse_genomes_project 19 30690588 30719628 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050187.1 MGP_WSBEiJ_G0024163.1 mouse_genomes_project 19 8951037 8952089 + MGP_WSBEiJ_P0050187 Olfr1420 protein_coding protein_coding MGP_WSBEiJ_T0049274.1 MGP_WSBEiJ_G0023897.1 mouse_genomes_project 19 473977 483481 + MGP_WSBEiJ_P0049274 1810055G02Rik protein_coding protein_coding MGP_WSBEiJ_T0010118.1 MGP_WSBEiJ_G0008275.1 mouse_genomes_project 19 2094310 2094416 - Gm27468 miRNA miRNA MGP_WSBEiJ_T0050058.1 MGP_WSBEiJ_G0024114.1 mouse_genomes_project 19 7471677 7480330 - MGP_WSBEiJ_P0050058 Ppp1r32 protein_coding protein_coding MGP_WSBEiJ_T0049840.1 MGP_WSBEiJ_G0024047.1 mouse_genomes_project 19 3912187 3916918 - MGP_WSBEiJ_P0049840 Dnajc4 protein_coding protein_coding MGP_WSBEiJ_T0050440.1 MGP_WSBEiJ_G0024285.1 mouse_genomes_project 19 27072074 27100949 - MGP_WSBEiJ_P0050440 Ak3 protein_coding protein_coding MGP_WSBEiJ_T0050441.1 MGP_WSBEiJ_G0024285.1 mouse_genomes_project 19 27077142 27078486 - MGP_WSBEiJ_P0050441 Ak3 protein_coding protein_coding MGP_WSBEiJ_T0050274.1 MGP_WSBEiJ_G0024228.1 mouse_genomes_project 19 13529900 13793663 + MGP_WSBEiJ_P0050274 Gnaq protein_coding protein_coding MGP_WSBEiJ_T0050275.1 MGP_WSBEiJ_G0024228.1 mouse_genomes_project 19 13530365 13720418 + Gnaq protein_coding retained_intron MGP_WSBEiJ_T0050276.1 MGP_WSBEiJ_G0024228.1 mouse_genomes_project 19 13618871 13721165 + Gnaq protein_coding processed_transcript MGP_WSBEiJ_T0050562.1 MGP_WSBEiJ_G0024335.1 mouse_genomes_project 19 34430142 34534328 - MGP_WSBEiJ_P0050562 Htr7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050563.1 MGP_WSBEiJ_G0024335.1 mouse_genomes_project 19 34430142 34534328 - MGP_WSBEiJ_P0050563 Htr7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050564.1 MGP_WSBEiJ_G0024335.1 mouse_genomes_project 19 34430142 34534308 - MGP_WSBEiJ_P0050564 Htr7 protein_coding protein_coding MGP_WSBEiJ_T0050565.1 MGP_WSBEiJ_G0024335.1 mouse_genomes_project 19 34430153 34534336 - MGP_WSBEiJ_P0050565 Htr7 protein_coding protein_coding MGP_WSBEiJ_T0050566.1 MGP_WSBEiJ_G0024335.1 mouse_genomes_project 19 34431228 34534475 - MGP_WSBEiJ_P0050566 Htr7 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050567.1 MGP_WSBEiJ_G0024335.1 mouse_genomes_project 19 34431723 34534341 - MGP_WSBEiJ_P0050567 Htr7 protein_coding protein_coding MGP_WSBEiJ_T0050179.1 MGP_WSBEiJ_G0024158.1 mouse_genomes_project 19 8729133 8749347 + MGP_WSBEiJ_P0050179 Oosp3 protein_coding protein_coding MGP_WSBEiJ_T0050180.1 MGP_WSBEiJ_G0024158.1 mouse_genomes_project 19 8729156 8749363 + MGP_WSBEiJ_P0050180 Oosp3 protein_coding protein_coding MGP_WSBEiJ_T0051062.1 MGP_WSBEiJ_G0024502.1 mouse_genomes_project 19 47069264 47090877 + MGP_WSBEiJ_P0051062 Gsto2 protein_coding protein_coding MGP_WSBEiJ_T0051063.1 MGP_WSBEiJ_G0024502.1 mouse_genomes_project 19 47069486 47090877 + MGP_WSBEiJ_P0051063 Gsto2 protein_coding protein_coding MGP_WSBEiJ_T0051064.1 MGP_WSBEiJ_G0024502.1 mouse_genomes_project 19 47073981 47089424 + MGP_WSBEiJ_P0051064 Gsto2 protein_coding protein_coding MGP_WSBEiJ_T0050522.1 MGP_WSBEiJ_G0024310.1 mouse_genomes_project 19 30831299 30880527 + MGP_WSBEiJ_P0050522 Papss2 protein_coding protein_coding MGP_WSBEiJ_T0049613.1 MGP_WSBEiJ_G0023999.1 mouse_genomes_project 19 2841936 2845949 - MGP_WSBEiJ_P0049613 Tigd3 protein_coding protein_coding MGP_WSBEiJ_T0050646.1 MGP_WSBEiJ_G0024362.1 mouse_genomes_project 19 37497560 37583621 + MGP_WSBEiJ_P0050646 Tbc1d12 protein_coding protein_coding MGP_WSBEiJ_T0013044.1 MGP_WSBEiJ_G0011174.1 mouse_genomes_project 19 21457225 21458218 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0051116.1 MGP_WSBEiJ_G0024524.1 mouse_genomes_project 19 54835251 54853106 - MGP_WSBEiJ_P0051116 Zdhhc6 protein_coding protein_coding MGP_WSBEiJ_T0050142.1 MGP_WSBEiJ_G0024147.1 mouse_genomes_project 19 8458883 8484146 + MGP_WSBEiJ_P0050142 protein_coding protein_coding MGP_WSBEiJ_T0050283.1 MGP_WSBEiJ_G0024233.1 mouse_genomes_project 19 14815291 14849402 - MGP_WSBEiJ_P0050283 Gcnt1 protein_coding protein_coding MGP_WSBEiJ_T0050284.1 MGP_WSBEiJ_G0024233.1 mouse_genomes_project 19 14815293 14830993 - MGP_WSBEiJ_P0050284 Gcnt1 protein_coding protein_coding MGP_WSBEiJ_T0050285.1 MGP_WSBEiJ_G0024233.1 mouse_genomes_project 19 14821410 14849402 - Gcnt1 protein_coding retained_intron MGP_WSBEiJ_T0011281.1 MGP_WSBEiJ_G0009438.1 mouse_genomes_project 19 32660204 32660363 + Gm27818 misc_RNA misc_RNA MGP_WSBEiJ_T0050908.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44596519 44687228 - MGP_WSBEiJ_P0050908 Fbxw4 protein_coding protein_coding MGP_WSBEiJ_T0050910.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44596884 44613339 - MGP_WSBEiJ_P0050910 Fbxw4 protein_coding protein_coding MGP_WSBEiJ_T0050911.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44597065 44611714 - MGP_WSBEiJ_P0050911 Fbxw4 protein_coding protein_coding MGP_WSBEiJ_T0050912.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44597067 44598161 - Fbxw4 protein_coding retained_intron MGP_WSBEiJ_T0050913.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44597111 44611714 - MGP_WSBEiJ_P0050913 Fbxw4 protein_coding protein_coding MGP_WSBEiJ_T0050914.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44597182 44612533 - MGP_WSBEiJ_P0050914 Fbxw4 protein_coding protein_coding MGP_WSBEiJ_T0050915.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44598032 44652852 - Fbxw4 protein_coding retained_intron MGP_WSBEiJ_T0050916.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44611332 44652852 - Fbxw4 protein_coding retained_intron MGP_WSBEiJ_T0050917.1 MGP_WSBEiJ_G0024456.1 mouse_genomes_project 19 44652587 44662355 - MGP_WSBEiJ_P0050917 Fbxw4 protein_coding protein_coding MGP_WSBEiJ_T0050592.1 MGP_WSBEiJ_G0024342.1 mouse_genomes_project 19 35452550 35454615 - MGP_WSBEiJ_P0050592 Fgfbp3 protein_coding protein_coding MGP_WSBEiJ_T0049906.1 MGP_WSBEiJ_G0024068.1 mouse_genomes_project 19 5150848 5152170 - protein_coding processed_transcript MGP_WSBEiJ_T0049491.1 MGP_WSBEiJ_G0023951.1 mouse_genomes_project 19 1843531 1848192 + MGP_WSBEiJ_P0049491 Mrpl11 protein_coding protein_coding MGP_WSBEiJ_T0098076.1 MGP_WSBEiJ_G0036739.1 mouse_genomes_project 19 42757793 42757900 - Gm24400 snRNA snRNA MGP_WSBEiJ_T0050982.1 MGP_WSBEiJ_G0024470.1 mouse_genomes_project 19 45395090 45400856 - MGP_WSBEiJ_P0050982 Psd protein_coding unknown_likely_coding MGP_WSBEiJ_T0050983.1 MGP_WSBEiJ_G0024470.1 mouse_genomes_project 19 45395097 45410160 - MGP_WSBEiJ_P0050983 Psd protein_coding protein_coding MGP_WSBEiJ_T0050984.1 MGP_WSBEiJ_G0024470.1 mouse_genomes_project 19 45395097 45410160 - MGP_WSBEiJ_P0050984 Psd protein_coding protein_coding MGP_WSBEiJ_T0050761.1 MGP_WSBEiJ_G0024401.1 mouse_genomes_project 19 40843356 40853000 + MGP_WSBEiJ_P0050761 Ankrd2 protein_coding protein_coding MGP_WSBEiJ_T0050116.1 MGP_WSBEiJ_G0024137.1 mouse_genomes_project 19 8100097 8117271 - MGP_WSBEiJ_P0050116 Ms4a8a protein_coding protein_coding MGP_WSBEiJ_T0050117.1 MGP_WSBEiJ_G0024137.1 mouse_genomes_project 19 8111720 8117271 - Ms4a8a protein_coding retained_intron MGP_WSBEiJ_T0049376.1 MGP_WSBEiJ_G0023917.1 mouse_genomes_project 19 951437 957379 + MGP_WSBEiJ_P0049376 Gpr152 protein_coding protein_coding MGP_WSBEiJ_T0049476.1 MGP_WSBEiJ_G0023947.1 mouse_genomes_project 19 1746663 1753371 + Zdhhc24 protein_coding processed_transcript MGP_WSBEiJ_T0049477.1 MGP_WSBEiJ_G0023947.1 mouse_genomes_project 19 1746667 1753371 + MGP_WSBEiJ_P0049477 Zdhhc24 protein_coding protein_coding MGP_WSBEiJ_T0049478.1 MGP_WSBEiJ_G0023947.1 mouse_genomes_project 19 1746685 1753369 + Zdhhc24 protein_coding processed_transcript MGP_WSBEiJ_T0049479.1 MGP_WSBEiJ_G0023947.1 mouse_genomes_project 19 1746699 1753370 + MGP_WSBEiJ_P0049479 Zdhhc24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049480.1 MGP_WSBEiJ_G0023947.1 mouse_genomes_project 19 1746718 1751753 + MGP_WSBEiJ_P0049480 Zdhhc24 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049481.1 MGP_WSBEiJ_G0023947.1 mouse_genomes_project 19 1747763 1751736 + Zdhhc24 protein_coding processed_transcript MGP_WSBEiJ_T0051206.1 MGP_WSBEiJ_G0024540.1 mouse_genomes_project 19 57088595 57131701 + MGP_WSBEiJ_P0051206 Trub1 protein_coding protein_coding MGP_WSBEiJ_T0051207.1 MGP_WSBEiJ_G0024540.1 mouse_genomes_project 19 57088595 57127971 + MGP_WSBEiJ_P0051207 Trub1 protein_coding protein_coding MGP_WSBEiJ_T0051074.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52343820 52438314 - MGP_WSBEiJ_P0051074 Xpnpep1 protein_coding protein_coding MGP_WSBEiJ_T0051075.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52346550 52438402 - MGP_WSBEiJ_P0051075 Xpnpep1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051076.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52387746 52417193 - Xpnpep1 protein_coding processed_transcript MGP_WSBEiJ_T0051077.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52387747 52439957 - MGP_WSBEiJ_P0051077 Xpnpep1 protein_coding protein_coding MGP_WSBEiJ_T0051078.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52391968 52393238 - Xpnpep1 protein_coding retained_intron MGP_WSBEiJ_T0051079.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52404532 52411936 - Xpnpep1 protein_coding processed_transcript MGP_WSBEiJ_T0051080.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52406696 52417028 - Xpnpep1 protein_coding processed_transcript MGP_WSBEiJ_T0051081.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52408777 52410200 - Xpnpep1 protein_coding retained_intron MGP_WSBEiJ_T0051082.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52408806 52438321 - MGP_WSBEiJ_P0051082 Xpnpep1 protein_coding protein_coding MGP_WSBEiJ_T0051083.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52414322 52429040 - Xpnpep1 protein_coding processed_transcript MGP_WSBEiJ_T0051084.1 MGP_WSBEiJ_G0024508.1 mouse_genomes_project 19 52429850 52438325 - Xpnpep1 protein_coding processed_transcript MGP_WSBEiJ_T0051230.1 MGP_WSBEiJ_G0024551.1 mouse_genomes_project 19 58882129 58885998 - MGP_WSBEiJ_P0051230 Vax1 protein_coding protein_coding MGP_WSBEiJ_T0051231.1 MGP_WSBEiJ_G0024551.1 mouse_genomes_project 19 58882540 58882923 - Vax1 protein_coding processed_transcript MGP_WSBEiJ_T0006975.1 MGP_WSBEiJ_G0005732.1 mouse_genomes_project 19 26107815 26108724 + Gm28228 lincRNA lincRNA MGP_WSBEiJ_T0011278.1 MGP_WSBEiJ_G0009435.1 mouse_genomes_project 19 28377762 28378045 + Gm24883 misc_RNA misc_RNA MGP_WSBEiJ_T0010154.1 MGP_WSBEiJ_G0008311.1 mouse_genomes_project 19 46954083 46954219 - Mir8090 miRNA miRNA MGP_WSBEiJ_T0050202.1 MGP_WSBEiJ_G0024178.1 mouse_genomes_project 19 9533508 9534456 + MGP_WSBEiJ_P0050202 Olfr1440 protein_coding protein_coding MGP_WSBEiJ_T0050160.1 MGP_WSBEiJ_G0024152.1 mouse_genomes_project 19 8574588 8600398 + MGP_WSBEiJ_P0050160 Ms4a4d protein_coding protein_coding MGP_WSBEiJ_T0099324.1 MGP_WSBEiJ_G0037987.1 mouse_genomes_project 19 60549529 60549661 - Snora19 snoRNA snoRNA MGP_WSBEiJ_T0049829.1 MGP_WSBEiJ_G0024042.1 mouse_genomes_project 19 3858544 3870213 + MGP_WSBEiJ_P0049829 Bad protein_coding protein_coding MGP_WSBEiJ_T0049830.1 MGP_WSBEiJ_G0024042.1 mouse_genomes_project 19 3859006 3870207 + MGP_WSBEiJ_P0049830 Bad protein_coding protein_coding MGP_WSBEiJ_T0049831.1 MGP_WSBEiJ_G0024042.1 mouse_genomes_project 19 3859184 3870208 + MGP_WSBEiJ_P0049831 Bad protein_coding protein_coding MGP_WSBEiJ_T0049832.1 MGP_WSBEiJ_G0024042.1 mouse_genomes_project 19 3859562 3869567 + MGP_WSBEiJ_P0049832 Bad protein_coding protein_coding MGP_WSBEiJ_T0049833.1 MGP_WSBEiJ_G0024042.1 mouse_genomes_project 19 3869081 3870189 + MGP_WSBEiJ_P0049833 Bad protein_coding protein_coding MGP_WSBEiJ_T0049901.1 MGP_WSBEiJ_G0024066.1 mouse_genomes_project 19 4652024 4688323 - MGP_WSBEiJ_P0049901 Slc22a19 protein_coding protein_coding MGP_WSBEiJ_T0049902.1 MGP_WSBEiJ_G0024066.1 mouse_genomes_project 19 4658511 4688292 - Slc22a19 protein_coding retained_intron MGP_WSBEiJ_T0049903.1 MGP_WSBEiJ_G0024066.1 mouse_genomes_project 19 4683696 4688323 - Slc22a19 protein_coding retained_intron MGP_WSBEiJ_T0010137.1 MGP_WSBEiJ_G0008294.1 mouse_genomes_project 19 27195337 27195434 + Mir101b miRNA miRNA MGP_WSBEiJ_T0049921.1 MGP_WSBEiJ_G0024074.1 mouse_genomes_project 19 5790160 5790668 + MGP_WSBEiJ_P0049921 1700092M07Rik protein_coding protein_coding MGP_WSBEiJ_T0049922.1 MGP_WSBEiJ_G0024074.1 mouse_genomes_project 19 5790204 5790667 + 1700092M07Rik protein_coding retained_intron MGP_WSBEiJ_T0050989.1 MGP_WSBEiJ_G0024473.1 mouse_genomes_project 19 45442303 45461723 + MGP_WSBEiJ_P0050989 Mfsd13a protein_coding protein_coding MGP_WSBEiJ_T0050990.1 MGP_WSBEiJ_G0024473.1 mouse_genomes_project 19 45442377 45461713 + MGP_WSBEiJ_P0050990 Mfsd13a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050991.1 MGP_WSBEiJ_G0024473.1 mouse_genomes_project 19 45453206 45461713 + Mfsd13a protein_coding retained_intron MGP_WSBEiJ_T0010158.1 MGP_WSBEiJ_G0008315.1 mouse_genomes_project 19 52407285 52407386 - Mir6407 miRNA miRNA MGP_WSBEiJ_T0010157.1 MGP_WSBEiJ_G0008314.1 mouse_genomes_project 19 49434759 49434884 + Gm27749 miRNA miRNA MGP_WSBEiJ_T0050189.1 MGP_WSBEiJ_G0024165.1 mouse_genomes_project 19 9027351 9057752 + MGP_WSBEiJ_P0050189 Osbp protein_coding protein_coding MGP_WSBEiJ_T0003791.1 MGP_WSBEiJ_G0003394.1 mouse_genomes_project 19 37397085 37400959 - Gm28991 antisense antisense MGP_WSBEiJ_T0051092.1 MGP_WSBEiJ_G0024513.1 mouse_genomes_project 19 52967651 52980822 + MGP_WSBEiJ_P0051092 Dusp5 protein_coding protein_coding MGP_WSBEiJ_T0099321.1 MGP_WSBEiJ_G0037984.1 mouse_genomes_project 19 45444479 45444588 + Gm24610 snoRNA snoRNA MGP_WSBEiJ_T0003805.1 MGP_WSBEiJ_G0003406.1 mouse_genomes_project 19 59143351 59178376 - Emx2os antisense antisense MGP_WSBEiJ_T0010119.1 MGP_WSBEiJ_G0008276.1 mouse_genomes_project 19 2614787 2614860 - Mir6987 miRNA miRNA MGP_WSBEiJ_T0049982.1 MGP_WSBEiJ_G0024084.1 mouse_genomes_project 19 5908280 5911405 + MGP_WSBEiJ_P0049982 Lrrn4cl protein_coding protein_coding MGP_WSBEiJ_T0050022.1 MGP_WSBEiJ_G0024102.1 mouse_genomes_project 19 6960719 6963140 + MGP_WSBEiJ_P0050022 Fth1 protein_coding protein_coding MGP_WSBEiJ_T0049520.1 MGP_WSBEiJ_G0023967.1 mouse_genomes_project 19 2256579 2261464 - MGP_WSBEiJ_P0049520 Cst6 protein_coding protein_coding MGP_WSBEiJ_T0050003.1 MGP_WSBEiJ_G0024094.1 mouse_genomes_project 19 6010350 6022119 + MGP_WSBEiJ_P0050003 Mta2 protein_coding protein_coding MGP_WSBEiJ_T0050004.1 MGP_WSBEiJ_G0024094.1 mouse_genomes_project 19 6010968 6014352 + Mta2 protein_coding processed_transcript MGP_WSBEiJ_T0050005.1 MGP_WSBEiJ_G0024094.1 mouse_genomes_project 19 6010981 6015222 + Mta2 protein_coding processed_transcript MGP_WSBEiJ_T0050006.1 MGP_WSBEiJ_G0024094.1 mouse_genomes_project 19 6012515 6015625 + Mta2 protein_coding retained_intron MGP_WSBEiJ_T0050007.1 MGP_WSBEiJ_G0024094.1 mouse_genomes_project 19 6013573 6015243 + Mta2 protein_coding processed_transcript MGP_WSBEiJ_T0050008.1 MGP_WSBEiJ_G0024094.1 mouse_genomes_project 19 6014894 6016187 + Mta2 protein_coding retained_intron MGP_WSBEiJ_T0050338.1 MGP_WSBEiJ_G0024252.1 mouse_genomes_project 19 19849180 20719139 + MGP_WSBEiJ_P0050338 Trpm3 protein_coding protein_coding MGP_WSBEiJ_T0050339.1 MGP_WSBEiJ_G0024252.1 mouse_genomes_project 19 19849180 20719139 + MGP_WSBEiJ_P0050339 Trpm3 protein_coding protein_coding MGP_WSBEiJ_T0050340.1 MGP_WSBEiJ_G0024252.1 mouse_genomes_project 19 19849180 20719139 + MGP_WSBEiJ_P0050340 Trpm3 protein_coding protein_coding MGP_WSBEiJ_T0050341.1 MGP_WSBEiJ_G0024252.1 mouse_genomes_project 19 20177923 20719141 + MGP_WSBEiJ_P0050341 Trpm3 protein_coding protein_coding MGP_WSBEiJ_T0050342.1 MGP_WSBEiJ_G0024252.1 mouse_genomes_project 19 20420741 20653819 + MGP_WSBEiJ_P0050342 Trpm3 protein_coding protein_coding MGP_WSBEiJ_T0050343.1 MGP_WSBEiJ_G0024252.1 mouse_genomes_project 19 20420741 20494638 + MGP_WSBEiJ_P0050343 Trpm3 protein_coding protein_coding MGP_WSBEiJ_T0050877.1 MGP_WSBEiJ_G0024441.1 mouse_genomes_project 19 43501664 43502769 + Hif1an protein_coding retained_intron MGP_WSBEiJ_T0050878.1 MGP_WSBEiJ_G0024441.1 mouse_genomes_project 19 43501664 43516510 + MGP_WSBEiJ_P0050878 Hif1an protein_coding protein_coding MGP_WSBEiJ_T0049495.1 MGP_WSBEiJ_G0023955.1 mouse_genomes_project 19 1921190 1929625 + MGP_WSBEiJ_P0049495 Brms1 protein_coding protein_coding MGP_WSBEiJ_T0099312.1 MGP_WSBEiJ_G0037975.1 mouse_genomes_project 19 19946838 19946936 - Gm22506 snoRNA snoRNA MGP_WSBEiJ_T0051043.1 MGP_WSBEiJ_G0024497.1 mouse_genomes_project 19 46777007 46840623 + MGP_WSBEiJ_P0051043 Slk protein_coding protein_coding MGP_WSBEiJ_T0051044.1 MGP_WSBEiJ_G0024497.1 mouse_genomes_project 19 46777348 46837832 + MGP_WSBEiJ_P0051044 Slk protein_coding protein_coding MGP_WSBEiJ_T0051045.1 MGP_WSBEiJ_G0024497.1 mouse_genomes_project 19 46816750 46821423 + Slk protein_coding retained_intron MGP_WSBEiJ_T0051046.1 MGP_WSBEiJ_G0024497.1 mouse_genomes_project 19 46818738 46821923 + Slk protein_coding retained_intron MGP_WSBEiJ_T0051047.1 MGP_WSBEiJ_G0024497.1 mouse_genomes_project 19 46830506 46831831 + Slk protein_coding retained_intron MGP_WSBEiJ_T0003800.1 MGP_WSBEiJ_G0003401.1 mouse_genomes_project 19 46798503 46813187 - Gm16068 antisense antisense MGP_WSBEiJ_T0050053.1 MGP_WSBEiJ_G0024112.1 mouse_genomes_project 19 7384602 7450350 + MGP_WSBEiJ_P0050053 Syt7 protein_coding protein_coding MGP_WSBEiJ_T0050054.1 MGP_WSBEiJ_G0024112.1 mouse_genomes_project 19 7384602 7450350 + MGP_WSBEiJ_P0050054 Syt7 protein_coding protein_coding MGP_WSBEiJ_T0050055.1 MGP_WSBEiJ_G0024112.1 mouse_genomes_project 19 7384602 7450350 + MGP_WSBEiJ_P0050055 Syt7 protein_coding protein_coding MGP_WSBEiJ_T0050056.1 MGP_WSBEiJ_G0024112.1 mouse_genomes_project 19 7384993 7450353 + MGP_WSBEiJ_P0050056 Syt7 protein_coding unknown_likely_coding MGP_WSBEiJ_T0003788.1 MGP_WSBEiJ_G0003392.1 mouse_genomes_project 19 27099226 27101717 + 1700018L02Rik antisense antisense MGP_WSBEiJ_T0013038.1 MGP_WSBEiJ_G0011168.1 mouse_genomes_project 19 9709148 9709740 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0010132.1 MGP_WSBEiJ_G0008289.1 mouse_genomes_project 19 8980939 8981012 + Mir6994 miRNA miRNA MGP_WSBEiJ_T0050736.1 MGP_WSBEiJ_G0024395.1 mouse_genomes_project 19 40658505 40693261 - MGP_WSBEiJ_P0050736 Rrp12 protein_coding protein_coding MGP_WSBEiJ_T0049454.1 MGP_WSBEiJ_G0023938.1 mouse_genomes_project 19 1560404 1603660 + MGP_WSBEiJ_P0049454 Sptbn2 protein_coding protein_coding MGP_WSBEiJ_T0050057.1 MGP_WSBEiJ_G0024113.1 mouse_genomes_project 19 7452539 7454608 - MGP_WSBEiJ_P0050057 Lrrc10b protein_coding protein_coding MGP_WSBEiJ_T0050888.1 MGP_WSBEiJ_G0024446.1 mouse_genomes_project 19 43984866 43990905 + MGP_WSBEiJ_P0050888 Peo1 protein_coding protein_coding MGP_WSBEiJ_T0050614.1 MGP_WSBEiJ_G0024347.1 mouse_genomes_project 19 35943531 35992424 + MGP_WSBEiJ_P0050614 Kif11 protein_coding protein_coding MGP_WSBEiJ_T0049593.1 MGP_WSBEiJ_G0023992.1 mouse_genomes_project 19 2644242 2663196 - MGP_WSBEiJ_P0049593 Ehbp1l1 protein_coding protein_coding MGP_WSBEiJ_T0049594.1 MGP_WSBEiJ_G0023992.1 mouse_genomes_project 19 2644242 2663196 - MGP_WSBEiJ_P0049594 Ehbp1l1 protein_coding protein_coding MGP_WSBEiJ_T0050606.1 MGP_WSBEiJ_G0024345.1 mouse_genomes_project 19 35756960 35770496 + MGP_WSBEiJ_P0050606 March5 protein_coding protein_coding MGP_WSBEiJ_T0050607.1 MGP_WSBEiJ_G0024345.1 mouse_genomes_project 19 35756968 35767061 + March5 protein_coding retained_intron MGP_WSBEiJ_T0050608.1 MGP_WSBEiJ_G0024345.1 mouse_genomes_project 19 35757262 35773876 + MGP_WSBEiJ_P0050608 March5 protein_coding protein_coding MGP_WSBEiJ_T0050239.1 MGP_WSBEiJ_G0024200.1 mouse_genomes_project 19 10235118 10236042 + MGP_WSBEiJ_P0050239 Olfr1454 protein_coding protein_coding MGP_WSBEiJ_T0099316.1 MGP_WSBEiJ_G0037979.1 mouse_genomes_project 19 33630067 33630199 + Gm24006 snoRNA snoRNA MGP_WSBEiJ_T0003796.1 MGP_WSBEiJ_G0003397.1 mouse_genomes_project 19 43792467 43799877 - 1700039E22Rik antisense antisense MGP_WSBEiJ_T0050882.1 MGP_WSBEiJ_G0024443.1 mouse_genomes_project 19 43895686 43959111 + MGP_WSBEiJ_P0050882 Fam178a protein_coding protein_coding MGP_WSBEiJ_T0050907.1 MGP_WSBEiJ_G0024455.1 mouse_genomes_project 19 44578334 44596550 + MGP_WSBEiJ_P0050907 Gm17018 protein_coding protein_coding MGP_WSBEiJ_T0050909.1 MGP_WSBEiJ_G0024455.1 mouse_genomes_project 19 44596547 44598034 + Gm17018 protein_coding antisense MGP_WSBEiJ_T0049983.1 MGP_WSBEiJ_G0024085.1 mouse_genomes_project 19 5935763 5939766 + MGP_WSBEiJ_P0049983 Ubxn1 protein_coding protein_coding MGP_WSBEiJ_T0049984.1 MGP_WSBEiJ_G0024085.1 mouse_genomes_project 19 5935847 5939774 + MGP_WSBEiJ_P0049984 Ubxn1 protein_coding protein_coding MGP_WSBEiJ_T0049595.1 MGP_WSBEiJ_G0023993.1 mouse_genomes_project 19 2664958 2668571 - MGP_WSBEiJ_P0049595 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049599.1 MGP_WSBEiJ_G0023993.1 mouse_genomes_project 19 2667183 2668537 - protein_coding retained_intron MGP_WSBEiJ_T0049600.1 MGP_WSBEiJ_G0023993.1 mouse_genomes_project 19 2667183 2668609 - MGP_WSBEiJ_P0049600 protein_coding protein_coding MGP_WSBEiJ_T0049601.1 MGP_WSBEiJ_G0023993.1 mouse_genomes_project 19 2667287 2668352 - MGP_WSBEiJ_P0049601 protein_coding protein_coding MGP_WSBEiJ_T0049602.1 MGP_WSBEiJ_G0023993.1 mouse_genomes_project 19 2667768 2668576 - protein_coding retained_intron MGP_WSBEiJ_T0050103.1 MGP_WSBEiJ_G0024131.1 mouse_genomes_project 19 7945086 7947100 - MGP_WSBEiJ_P0050103 Zp1 protein_coding protein_coding MGP_WSBEiJ_T0050104.1 MGP_WSBEiJ_G0024131.1 mouse_genomes_project 19 7945088 7951444 - MGP_WSBEiJ_P0050104 Zp1 protein_coding protein_coding MGP_WSBEiJ_T0051073.1 MGP_WSBEiJ_G0024507.1 mouse_genomes_project 19 51626850 51627984 + MGP_WSBEiJ_P0051073 Ins1 protein_coding protein_coding MGP_WSBEiJ_T0098073.1 MGP_WSBEiJ_G0036736.1 mouse_genomes_project 19 35784035 35784138 - Gm25268 snRNA snRNA MGP_WSBEiJ_T0050446.1 MGP_WSBEiJ_G0024289.1 mouse_genomes_project 19 27406774 27410157 - Rln1 protein_coding retained_intron MGP_WSBEiJ_T0050447.1 MGP_WSBEiJ_G0024289.1 mouse_genomes_project 19 27407310 27410275 - MGP_WSBEiJ_P0050447 Rln1 protein_coding protein_coding MGP_WSBEiJ_T0013030.1 MGP_WSBEiJ_G0011160.1 mouse_genomes_project 19 2332371 2332566 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0011283.1 MGP_WSBEiJ_G0009440.1 mouse_genomes_project 19 37547060 37547180 + Gm25838 misc_RNA misc_RNA MGP_WSBEiJ_T0013056.1 MGP_WSBEiJ_G0011186.1 mouse_genomes_project 19 60594767 60595135 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049564.1 MGP_WSBEiJ_G0023981.1 mouse_genomes_project 19 2420579 2435776 - MGP_WSBEiJ_P0049564 Snx32 protein_coding protein_coding MGP_WSBEiJ_T0051205.1 MGP_WSBEiJ_G0024539.1 mouse_genomes_project 19 56997844 57027664 + MGP_WSBEiJ_P0051205 Fam160b1 protein_coding protein_coding MGP_WSBEiJ_T0013035.1 MGP_WSBEiJ_G0011165.1 mouse_genomes_project 19 5632271 5633061 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050654.1 MGP_WSBEiJ_G0024365.1 mouse_genomes_project 19 37746228 37861138 + MGP_WSBEiJ_P0050654 Cyp2c66 protein_coding protein_coding MGP_WSBEiJ_T0050656.1 MGP_WSBEiJ_G0024365.1 mouse_genomes_project 19 37800767 37861457 + MGP_WSBEiJ_P0050656 Cyp2c66 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050478.1 MGP_WSBEiJ_G0024297.1 mouse_genomes_project 19 27893857 27898432 - MGP_WSBEiJ_P0050478 Ranbp6 protein_coding protein_coding MGP_WSBEiJ_T0051115.1 MGP_WSBEiJ_G0024523.1 mouse_genomes_project 19 54787607 54833578 + MGP_WSBEiJ_P0051115 Acsl5 protein_coding protein_coding MGP_WSBEiJ_T0100356.1 MGP_WSBEiJ_G0038834.1 mouse_genomes_project 19 45432517 45435799 - unitary_pseudogene processed_transcript MGP_WSBEiJ_T0100357.1 MGP_WSBEiJ_G0038834.1 mouse_genomes_project 19 45433215 45435799 - unitary_pseudogene unitary_pseudogene MGP_WSBEiJ_T0097202.1 MGP_WSBEiJ_G0035883.1 mouse_genomes_project 19 8727325 8727401 + Gm25443 scaRNA scaRNA MGP_WSBEiJ_T0050445.1 MGP_WSBEiJ_G0024288.1 mouse_genomes_project 19 27396100 27401013 - MGP_WSBEiJ_P0050445 Insl6 protein_coding protein_coding MGP_WSBEiJ_T0049406.1 MGP_WSBEiJ_G0023927.1 mouse_genomes_project 19 1087476 1094981 - MGP_WSBEiJ_P0049406 Ssh3 protein_coding protein_coding MGP_WSBEiJ_T0049407.1 MGP_WSBEiJ_G0023927.1 mouse_genomes_project 19 1087481 1094981 - MGP_WSBEiJ_P0049407 Ssh3 protein_coding protein_coding MGP_WSBEiJ_T0050210.1 MGP_WSBEiJ_G0024184.1 mouse_genomes_project 19 9742394 9770739 + MGP_WSBEiJ_P0050210 Gm4952 protein_coding protein_coding MGP_WSBEiJ_T0050211.1 MGP_WSBEiJ_G0024184.1 mouse_genomes_project 19 9742436 9772117 + MGP_WSBEiJ_P0050211 Gm4952 protein_coding protein_coding MGP_WSBEiJ_T0050076.1 MGP_WSBEiJ_G0024126.1 mouse_genomes_project 19 7815604 7857429 - MGP_WSBEiJ_P0050076 Cd6 protein_coding protein_coding MGP_WSBEiJ_T0050077.1 MGP_WSBEiJ_G0024126.1 mouse_genomes_project 19 7815609 7825010 - Cd6 protein_coding retained_intron MGP_WSBEiJ_T0050078.1 MGP_WSBEiJ_G0024126.1 mouse_genomes_project 19 7815612 7857335 - MGP_WSBEiJ_P0050078 Cd6 protein_coding protein_coding MGP_WSBEiJ_T0050079.1 MGP_WSBEiJ_G0024126.1 mouse_genomes_project 19 7817249 7819252 - Cd6 protein_coding retained_intron MGP_WSBEiJ_T0050080.1 MGP_WSBEiJ_G0024126.1 mouse_genomes_project 19 7820827 7857227 - MGP_WSBEiJ_P0050080 Cd6 protein_coding protein_coding MGP_WSBEiJ_T0050900.1 MGP_WSBEiJ_G0024451.1 mouse_genomes_project 19 44147861 44154078 + MGP_WSBEiJ_P0050900 Tlx1 protein_coding protein_coding MGP_WSBEiJ_T0050901.1 MGP_WSBEiJ_G0024451.1 mouse_genomes_project 19 44148650 44153543 + MGP_WSBEiJ_P0050901 Tlx1 protein_coding protein_coding MGP_WSBEiJ_T0051220.1 MGP_WSBEiJ_G0024545.1 mouse_genomes_project 19 58426697 58443786 + MGP_WSBEiJ_P0051220 Pnliprp1 protein_coding protein_coding MGP_WSBEiJ_T0096804.1 MGP_WSBEiJ_G0035485.1 mouse_genomes_project 19 10186278 10187202 + pseudogene pseudogene MGP_WSBEiJ_T0050553.1 MGP_WSBEiJ_G0024328.1 mouse_genomes_project 19 32997500 32999171 + MGP_WSBEiJ_P0050553 protein_coding protein_coding MGP_WSBEiJ_T0050622.1 MGP_WSBEiJ_G0024353.1 mouse_genomes_project 19 36652000 36671726 + MGP_WSBEiJ_P0050622 Cep55 protein_coding protein_coding MGP_WSBEiJ_T0050623.1 MGP_WSBEiJ_G0024353.1 mouse_genomes_project 19 36652015 36670799 + MGP_WSBEiJ_P0050623 Cep55 protein_coding protein_coding MGP_WSBEiJ_T0050624.1 MGP_WSBEiJ_G0024353.1 mouse_genomes_project 19 36652017 36671726 + MGP_WSBEiJ_P0050624 Cep55 protein_coding protein_coding MGP_WSBEiJ_T0050535.1 MGP_WSBEiJ_G0024319.1 mouse_genomes_project 19 32472943 32491353 + MGP_WSBEiJ_P0050535 Lipm protein_coding protein_coding MGP_WSBEiJ_T0050424.1 MGP_WSBEiJ_G0024281.1 mouse_genomes_project 19 26876807 26921131 + Slc1a1 protein_coding retained_intron MGP_WSBEiJ_T0050425.1 MGP_WSBEiJ_G0024281.1 mouse_genomes_project 19 26876832 26958830 + MGP_WSBEiJ_P0050425 Slc1a1 protein_coding protein_coding MGP_WSBEiJ_T0050426.1 MGP_WSBEiJ_G0024281.1 mouse_genomes_project 19 26876893 26949667 + Slc1a1 protein_coding retained_intron MGP_WSBEiJ_T0050427.1 MGP_WSBEiJ_G0024281.1 mouse_genomes_project 19 26935974 26956747 + Slc1a1 protein_coding retained_intron MGP_WSBEiJ_T0050429.1 MGP_WSBEiJ_G0024281.1 mouse_genomes_project 19 26938754 26957508 + Slc1a1 protein_coding retained_intron MGP_WSBEiJ_T0049359.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 907878 923998 + MGP_WSBEiJ_P0049359 Pitpnm1 protein_coding protein_coding MGP_WSBEiJ_T0049360.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 907926 923998 + Pitpnm1 protein_coding retained_intron MGP_WSBEiJ_T0049361.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 908149 912802 + MGP_WSBEiJ_P0049361 Pitpnm1 protein_coding protein_coding MGP_WSBEiJ_T0049362.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 908502 923998 + MGP_WSBEiJ_P0049362 Pitpnm1 protein_coding protein_coding MGP_WSBEiJ_T0049363.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 916076 919940 + Pitpnm1 protein_coding retained_intron MGP_WSBEiJ_T0049364.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 916624 922250 + Pitpnm1 protein_coding processed_transcript MGP_WSBEiJ_T0049365.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 919680 920767 + Pitpnm1 protein_coding retained_intron MGP_WSBEiJ_T0049366.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 920832 922057 + Pitpnm1 protein_coding retained_intron MGP_WSBEiJ_T0049367.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 921193 922404 + Pitpnm1 protein_coding retained_intron MGP_WSBEiJ_T0049368.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 921961 923648 + Pitpnm1 protein_coding retained_intron MGP_WSBEiJ_T0049369.1 MGP_WSBEiJ_G0023914.1 mouse_genomes_project 19 922352 923998 + Pitpnm1 protein_coding retained_intron MGP_WSBEiJ_T0050236.1 MGP_WSBEiJ_G0024197.1 mouse_genomes_project 19 10099186 10100134 + MGP_WSBEiJ_P0050236 Olfr1449 protein_coding protein_coding MGP_WSBEiJ_T0100679.1 MGP_WSBEiJ_G0039137.1 mouse_genomes_project 19 6326023 6331854 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0010138.1 MGP_WSBEiJ_G0008295.1 mouse_genomes_project 19 28371810 28371887 - Gm24108 miRNA miRNA MGP_WSBEiJ_T0049985.1 MGP_WSBEiJ_G0024086.1 mouse_genomes_project 19 5945165 5946083 - MGP_WSBEiJ_P0049985 Uqcc3 protein_coding protein_coding MGP_WSBEiJ_T0050731.1 MGP_WSBEiJ_G0024393.1 mouse_genomes_project 19 40556688 40591695 - MGP_WSBEiJ_P0050731 Arhgap19 protein_coding protein_coding MGP_WSBEiJ_T0050732.1 MGP_WSBEiJ_G0024393.1 mouse_genomes_project 19 40556691 40591732 - MGP_WSBEiJ_P0050732 Arhgap19 protein_coding protein_coding MGP_WSBEiJ_T0050733.1 MGP_WSBEiJ_G0024393.1 mouse_genomes_project 19 40559784 40571360 - MGP_WSBEiJ_P0050733 Arhgap19 protein_coding protein_coding MGP_WSBEiJ_T0050734.1 MGP_WSBEiJ_G0024393.1 mouse_genomes_project 19 40559979 40591695 - MGP_WSBEiJ_P0050734 Arhgap19 protein_coding protein_coding MGP_WSBEiJ_T0050017.1 MGP_WSBEiJ_G0024098.1 mouse_genomes_project 19 6158911 6163229 - MGP_WSBEiJ_P0050017 Scgb1a1 protein_coding protein_coding MGP_WSBEiJ_T0049920.1 MGP_WSBEiJ_G0024073.1 mouse_genomes_project 19 5784366 5790066 + MGP_WSBEiJ_P0049920 Wdr74 protein_coding protein_coding MGP_WSBEiJ_T0049891.1 MGP_WSBEiJ_G0024063.1 mouse_genomes_project 19 4534464 4565208 + MGP_WSBEiJ_P0049891 Pla2g16 protein_coding protein_coding MGP_WSBEiJ_T0049892.1 MGP_WSBEiJ_G0024063.1 mouse_genomes_project 19 4534464 4558379 + MGP_WSBEiJ_P0049892 Pla2g16 protein_coding protein_coding MGP_WSBEiJ_T0049893.1 MGP_WSBEiJ_G0024063.1 mouse_genomes_project 19 4534482 4555793 + MGP_WSBEiJ_P0049893 Pla2g16 protein_coding protein_coding MGP_WSBEiJ_T0049894.1 MGP_WSBEiJ_G0024063.1 mouse_genomes_project 19 4534490 4563374 + MGP_WSBEiJ_P0049894 Pla2g16 protein_coding protein_coding MGP_WSBEiJ_T0050693.1 MGP_WSBEiJ_G0024379.1 mouse_genomes_project 19 39356110 39372283 - MGP_WSBEiJ_P0050693 Tctn3 protein_coding protein_coding MGP_WSBEiJ_T0050694.1 MGP_WSBEiJ_G0024379.1 mouse_genomes_project 19 39365110 39372253 - MGP_WSBEiJ_P0050694 Tctn3 protein_coding protein_coding MGP_WSBEiJ_T0050695.1 MGP_WSBEiJ_G0024379.1 mouse_genomes_project 19 39367111 39372250 - MGP_WSBEiJ_P0050695 Tctn3 protein_coding protein_coding MGP_WSBEiJ_T0050696.1 MGP_WSBEiJ_G0024379.1 mouse_genomes_project 19 39371180 39372238 - Tctn3 protein_coding retained_intron MGP_WSBEiJ_T0049347.1 MGP_WSBEiJ_G0023910.1 mouse_genomes_project 19 835942 846147 - MGP_WSBEiJ_P0049347 Gstp1 protein_coding protein_coding MGP_WSBEiJ_T0051233.1 MGP_WSBEiJ_G0024553.1 mouse_genomes_project 19 58977079 59012207 + MGP_WSBEiJ_P0051233 Slc18a2 protein_coding protein_coding MGP_WSBEiJ_T0051052.1 MGP_WSBEiJ_G0024500.1 mouse_genomes_project 19 46936295 47040920 - MGP_WSBEiJ_P0051052 Cfap43 protein_coding protein_coding MGP_WSBEiJ_T0051053.1 MGP_WSBEiJ_G0024500.1 mouse_genomes_project 19 46936340 46961029 - Cfap43 protein_coding processed_transcript MGP_WSBEiJ_T0051054.1 MGP_WSBEiJ_G0024500.1 mouse_genomes_project 19 46936340 46961029 - Cfap43 protein_coding processed_transcript MGP_WSBEiJ_T0051055.1 MGP_WSBEiJ_G0024500.1 mouse_genomes_project 19 46951336 46961037 - Cfap43 protein_coding processed_transcript MGP_WSBEiJ_T0051056.1 MGP_WSBEiJ_G0024500.1 mouse_genomes_project 19 46986711 47125121 - Cfap43 protein_coding retained_intron MGP_WSBEiJ_T0051057.1 MGP_WSBEiJ_G0024500.1 mouse_genomes_project 19 46997191 47008685 - Cfap43 protein_coding processed_transcript MGP_WSBEiJ_T0051058.1 MGP_WSBEiJ_G0024500.1 mouse_genomes_project 19 47023300 47040899 - Cfap43 protein_coding retained_intron MGP_WSBEiJ_T0051065.1 MGP_WSBEiJ_G0024500.1 mouse_genomes_project 19 47099146 47125133 - MGP_WSBEiJ_P0051065 Cfap43 protein_coding protein_coding MGP_WSBEiJ_T0049768.1 MGP_WSBEiJ_G0024030.1 mouse_genomes_project 19 3387257 3402297 + MGP_WSBEiJ_P0049768 Pygm protein_coding protein_coding MGP_WSBEiJ_T0049769.1 MGP_WSBEiJ_G0024030.1 mouse_genomes_project 19 3387273 3402286 + MGP_WSBEiJ_P0049769 Pygm protein_coding protein_coding MGP_WSBEiJ_T0049770.1 MGP_WSBEiJ_G0024030.1 mouse_genomes_project 19 3395560 3397038 + Pygm protein_coding retained_intron MGP_WSBEiJ_T0049771.1 MGP_WSBEiJ_G0024030.1 mouse_genomes_project 19 3401332 3402129 + Pygm protein_coding retained_intron MGP_WSBEiJ_T0049483.1 MGP_WSBEiJ_G0023949.1 mouse_genomes_project 19 1775005 1795866 - MGP_WSBEiJ_P0049483 Dpp3 protein_coding protein_coding MGP_WSBEiJ_T0050438.1 MGP_WSBEiJ_G0024284.1 mouse_genomes_project 19 27040828 27068811 + MGP_WSBEiJ_P0050438 Cdc37l1 protein_coding protein_coding MGP_WSBEiJ_T0050439.1 MGP_WSBEiJ_G0024284.1 mouse_genomes_project 19 27040872 27069178 + MGP_WSBEiJ_P0050439 Cdc37l1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049810.1 MGP_WSBEiJ_G0024034.1 mouse_genomes_project 19 3733490 3744879 - MGP_WSBEiJ_P0049810 Rps6ka4 protein_coding protein_coding MGP_WSBEiJ_T0049695.1 MGP_WSBEiJ_G0024020.1 mouse_genomes_project 19 3128852 3160610 + Batf2 protein_coding processed_transcript MGP_WSBEiJ_T0049696.1 MGP_WSBEiJ_G0024020.1 mouse_genomes_project 19 3152571 3160613 + MGP_WSBEiJ_P0049696 Batf2 protein_coding protein_coding MGP_WSBEiJ_T0049697.1 MGP_WSBEiJ_G0024020.1 mouse_genomes_project 19 3152586 3159905 + Batf2 protein_coding retained_intron MGP_WSBEiJ_T0049698.1 MGP_WSBEiJ_G0024020.1 mouse_genomes_project 19 3152586 3159504 + Batf2 protein_coding retained_intron MGP_WSBEiJ_T0049699.1 MGP_WSBEiJ_G0024020.1 mouse_genomes_project 19 3152592 3159895 + Batf2 protein_coding processed_transcript MGP_WSBEiJ_T0049700.1 MGP_WSBEiJ_G0024020.1 mouse_genomes_project 19 3152621 3159504 + Batf2 protein_coding retained_intron MGP_WSBEiJ_T0050068.1 MGP_WSBEiJ_G0024119.1 mouse_genomes_project 19 7582840 7594989 + MGP_WSBEiJ_P0050068 Cyb561a3 protein_coding protein_coding MGP_WSBEiJ_T0049494.1 MGP_WSBEiJ_G0023954.1 mouse_genomes_project 19 1918594 1920921 + MGP_WSBEiJ_P0049494 B4gat1 protein_coding protein_coding MGP_WSBEiJ_T0050303.1 MGP_WSBEiJ_G0024240.1 mouse_genomes_project 19 16312143 16472972 + MGP_WSBEiJ_P0050303 Trpm6 protein_coding protein_coding MGP_WSBEiJ_T0050304.1 MGP_WSBEiJ_G0024240.1 mouse_genomes_project 19 16312191 16472979 + MGP_WSBEiJ_P0050304 Trpm6 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049889.1 MGP_WSBEiJ_G0024062.1 mouse_genomes_project 19 4469331 4515881 + MGP_WSBEiJ_P0049889 Atl3 protein_coding protein_coding MGP_WSBEiJ_T0049890.1 MGP_WSBEiJ_G0024062.1 mouse_genomes_project 19 4469729 4515881 + MGP_WSBEiJ_P0049890 Atl3 protein_coding protein_coding MGP_WSBEiJ_T0006970.1 MGP_WSBEiJ_G0005729.1 mouse_genomes_project 19 20879635 20880451 + 2410080I02Rik lincRNA lincRNA MGP_WSBEiJ_T0051260.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60835790 60931627 - MGP_WSBEiJ_P0051260 Zfp950 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051261.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60904163 60931672 - MGP_WSBEiJ_P0051261 Zfp950 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051262.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60905719 60906554 - Zfp950 protein_coding retained_intron MGP_WSBEiJ_T0051263.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60906304 60931649 - MGP_WSBEiJ_P0051263 Zfp950 protein_coding protein_coding MGP_WSBEiJ_T0051264.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60906323 60931651 - MGP_WSBEiJ_P0051264 Zfp950 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051265.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60906454 60931602 - MGP_WSBEiJ_P0051265 Zfp950 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051266.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60907312 60931594 - MGP_WSBEiJ_P0051266 Zfp950 protein_coding protein_coding MGP_WSBEiJ_T0051267.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60908616 60908787 - MGP_WSBEiJ_P0051267 Zfp950 protein_coding protein_coding MGP_WSBEiJ_T0051268.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60911800 60931622 - MGP_WSBEiJ_P0051268 Zfp950 protein_coding protein_coding MGP_WSBEiJ_T0051269.1 MGP_WSBEiJ_G0024566.1 mouse_genomes_project 19 60916379 60916943 - MGP_WSBEiJ_P0051269 Zfp950 protein_coding protein_coding MGP_WSBEiJ_T0051225.1 MGP_WSBEiJ_G0024549.1 mouse_genomes_project 19 58649169 58676395 + MGP_WSBEiJ_P0051225 Eno4 protein_coding protein_coding MGP_WSBEiJ_T0051226.1 MGP_WSBEiJ_G0024549.1 mouse_genomes_project 19 58649169 58676393 + MGP_WSBEiJ_P0051226 Eno4 protein_coding protein_coding MGP_WSBEiJ_T0051227.1 MGP_WSBEiJ_G0024549.1 mouse_genomes_project 19 58658920 58676391 + MGP_WSBEiJ_P0051227 Eno4 protein_coding protein_coding MGP_WSBEiJ_T0051228.1 MGP_WSBEiJ_G0024549.1 mouse_genomes_project 19 58661193 58675907 + MGP_WSBEiJ_P0051228 Eno4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051091.1 MGP_WSBEiJ_G0024512.1 mouse_genomes_project 19 52802138 52813429 - MGP_WSBEiJ_P0051091 Smndc1 protein_coding protein_coding MGP_WSBEiJ_T0010142.1 MGP_WSBEiJ_G0008299.1 mouse_genomes_project 19 33221326 33221413 - Mir107 miRNA miRNA MGP_WSBEiJ_T0050879.1 MGP_WSBEiJ_G0024442.1 mouse_genomes_project 19 43713743 43801790 + MGP_WSBEiJ_P0050879 Pax2 protein_coding protein_coding MGP_WSBEiJ_T0050880.1 MGP_WSBEiJ_G0024442.1 mouse_genomes_project 19 43715091 43801810 + MGP_WSBEiJ_P0050880 Pax2 protein_coding protein_coding MGP_WSBEiJ_T0050881.1 MGP_WSBEiJ_G0024442.1 mouse_genomes_project 19 43717597 43780198 + MGP_WSBEiJ_P0050881 Pax2 protein_coding protein_coding MGP_WSBEiJ_T0099317.1 MGP_WSBEiJ_G0037980.1 mouse_genomes_project 19 34220991 34221124 - Gm25611 snoRNA snoRNA MGP_WSBEiJ_T0049910.1 MGP_WSBEiJ_G0024071.1 mouse_genomes_project 19 5706647 5721110 + MGP_WSBEiJ_P0049910 Chrm1 protein_coding protein_coding MGP_WSBEiJ_T0049911.1 MGP_WSBEiJ_G0024071.1 mouse_genomes_project 19 5706887 5726560 + MGP_WSBEiJ_P0049911 Chrm1 protein_coding protein_coding MGP_WSBEiJ_T0049912.1 MGP_WSBEiJ_G0024071.1 mouse_genomes_project 19 5706887 5724523 + MGP_WSBEiJ_P0049912 Chrm1 protein_coding protein_coding MGP_WSBEiJ_T0050569.1 MGP_WSBEiJ_G0024337.1 mouse_genomes_project 19 34591612 34600586 - MGP_WSBEiJ_P0050569 Ankrd1 protein_coding protein_coding MGP_WSBEiJ_T0050378.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24536305 24731504 + MGP_WSBEiJ_P0050378 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050379.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24536309 24731458 + MGP_WSBEiJ_P0050379 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050380.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24538461 24731456 + MGP_WSBEiJ_P0050380 Smarca2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050381.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24538521 24731509 + MGP_WSBEiJ_P0050381 Smarca2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050382.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24553224 24730556 + MGP_WSBEiJ_P0050382 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050383.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24557391 24565008 + MGP_WSBEiJ_P0050383 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050384.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24608440 24616391 + Smarca2 protein_coding retained_intron MGP_WSBEiJ_T0050385.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24618800 24703696 + Smarca2 protein_coding processed_transcript MGP_WSBEiJ_T0050386.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24664378 24723450 + Smarca2 protein_coding retained_intron MGP_WSBEiJ_T0050387.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24670299 24703736 + Smarca2 protein_coding processed_transcript MGP_WSBEiJ_T0050388.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24700420 24730662 + MGP_WSBEiJ_P0050388 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050389.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24700574 24730556 + MGP_WSBEiJ_P0050389 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050390.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24700609 24729428 + MGP_WSBEiJ_P0050390 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050391.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24700610 24730556 + MGP_WSBEiJ_P0050391 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050392.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24700610 24731456 + MGP_WSBEiJ_P0050392 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050393.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24701570 24727491 + MGP_WSBEiJ_P0050393 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050394.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24702706 24722692 + MGP_WSBEiJ_P0050394 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050395.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24703708 24731504 + MGP_WSBEiJ_P0050395 Smarca2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050396.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24705365 24730835 + MGP_WSBEiJ_P0050396 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050397.1 MGP_WSBEiJ_G0024274.1 mouse_genomes_project 19 24722205 24730618 + MGP_WSBEiJ_P0050397 Smarca2 protein_coding protein_coding MGP_WSBEiJ_T0050898.1 MGP_WSBEiJ_G0024450.1 mouse_genomes_project 19 44066258 44070300 + MGP_WSBEiJ_P0050898 Kazald1 protein_coding protein_coding MGP_WSBEiJ_T0050899.1 MGP_WSBEiJ_G0024450.1 mouse_genomes_project 19 44067156 44070300 + MGP_WSBEiJ_P0050899 Kazald1 protein_coding protein_coding MGP_WSBEiJ_T0050232.1 MGP_WSBEiJ_G0024193.1 mouse_genomes_project 19 10049154 10050155 + MGP_WSBEiJ_P0050232 Olfr1445 protein_coding protein_coding MGP_WSBEiJ_T0013032.1 MGP_WSBEiJ_G0011162.1 mouse_genomes_project 19 4647253 4647760 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050414.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26278211 26710020 - MGP_WSBEiJ_P0050414 Glis3 protein_coding protein_coding MGP_WSBEiJ_T0050415.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26281704 26349736 - Glis3 protein_coding processed_transcript MGP_WSBEiJ_T0050416.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26281721 26709609 - MGP_WSBEiJ_P0050416 Glis3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050417.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26281783 26323850 - Glis3 protein_coding processed_transcript MGP_WSBEiJ_T0050418.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26282330 26569963 - Glis3 protein_coding retained_intron MGP_WSBEiJ_T0050419.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26283308 26303276 - Glis3 protein_coding retained_intron MGP_WSBEiJ_T0050420.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26374423 26710020 - MGP_WSBEiJ_P0050420 Glis3 protein_coding protein_coding MGP_WSBEiJ_T0050421.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26560812 26708633 - MGP_WSBEiJ_P0050421 Glis3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050422.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26560812 26696491 - MGP_WSBEiJ_P0050422 Glis3 protein_coding protein_coding MGP_WSBEiJ_T0050423.1 MGP_WSBEiJ_G0024280.1 mouse_genomes_project 19 26560812 26708633 - MGP_WSBEiJ_P0050423 Glis3 protein_coding protein_coding MGP_WSBEiJ_T0051246.1 MGP_WSBEiJ_G0024560.1 mouse_genomes_project 19 60529837 60533779 + MGP_WSBEiJ_P0051246 Nanos1 protein_coding protein_coding MGP_WSBEiJ_T0050286.1 MGP_WSBEiJ_G0024234.1 mouse_genomes_project 19 14887691 14896134 + MGP_WSBEiJ_P0050286 Rfk protein_coding protein_coding MGP_WSBEiJ_T0050287.1 MGP_WSBEiJ_G0024234.1 mouse_genomes_project 19 14888216 14894619 + Rfk protein_coding processed_transcript MGP_WSBEiJ_T0050288.1 MGP_WSBEiJ_G0024234.1 mouse_genomes_project 19 14891085 14894722 + Rfk protein_coding processed_transcript MGP_WSBEiJ_T0099325.1 MGP_WSBEiJ_G0037988.1 mouse_genomes_project 19 60550715 60550834 - Gm26158 snoRNA snoRNA MGP_WSBEiJ_T0050538.1 MGP_WSBEiJ_G0024321.1 mouse_genomes_project 19 32555832 32605318 + MGP_WSBEiJ_P0050538 Stambpl1 protein_coding protein_coding MGP_WSBEiJ_T0050539.1 MGP_WSBEiJ_G0024321.1 mouse_genomes_project 19 32556425 32596433 + MGP_WSBEiJ_P0050539 Stambpl1 protein_coding protein_coding MGP_WSBEiJ_T0050540.1 MGP_WSBEiJ_G0024321.1 mouse_genomes_project 19 32581516 32600851 + Stambpl1 protein_coding retained_intron MGP_WSBEiJ_T0050541.1 MGP_WSBEiJ_G0024321.1 mouse_genomes_project 19 32581705 32605314 + MGP_WSBEiJ_P0050541 Stambpl1 protein_coding protein_coding MGP_WSBEiJ_T0050542.1 MGP_WSBEiJ_G0024321.1 mouse_genomes_project 19 32597696 32599289 + Stambpl1 protein_coding processed_transcript MGP_WSBEiJ_T0049505.1 MGP_WSBEiJ_G0023960.1 mouse_genomes_project 19 1977802 1983657 - MGP_WSBEiJ_P0049505 Cnih2 protein_coding protein_coding MGP_WSBEiJ_T0049405.1 MGP_WSBEiJ_G0023926.1 mouse_genomes_project 19 1050461 1052188 + MGP_WSBEiJ_P0049405 Pold4 protein_coding protein_coding MGP_WSBEiJ_T0050712.1 MGP_WSBEiJ_G0024383.1 mouse_genomes_project 19 39703176 39773158 - MGP_WSBEiJ_P0050712 Blnk protein_coding protein_coding MGP_WSBEiJ_T0050713.1 MGP_WSBEiJ_G0024383.1 mouse_genomes_project 19 39703176 39772771 - MGP_WSBEiJ_P0050713 Blnk protein_coding protein_coding MGP_WSBEiJ_T0050714.1 MGP_WSBEiJ_G0024383.1 mouse_genomes_project 19 39742467 39773158 - Blnk protein_coding retained_intron MGP_WSBEiJ_T0007006.1 MGP_WSBEiJ_G0005752.1 mouse_genomes_project 19 52896469 52898564 + 4833407H14Rik lincRNA lincRNA MGP_WSBEiJ_T0049306.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 676283 684733 - Tcirg1 protein_coding retained_intron MGP_WSBEiJ_T0049307.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 676283 687295 - MGP_WSBEiJ_P0049307 Tcirg1 protein_coding protein_coding MGP_WSBEiJ_T0049308.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 676283 689198 - MGP_WSBEiJ_P0049308 Tcirg1 protein_coding protein_coding MGP_WSBEiJ_T0049309.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 676283 689056 - MGP_WSBEiJ_P0049309 Tcirg1 protein_coding protein_coding MGP_WSBEiJ_T0049310.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 676283 689177 - MGP_WSBEiJ_P0049310 Tcirg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049311.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 676503 683684 - MGP_WSBEiJ_P0049311 Tcirg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049312.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 676633 677464 - Tcirg1 protein_coding retained_intron MGP_WSBEiJ_T0049313.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 677304 678065 - Tcirg1 protein_coding retained_intron MGP_WSBEiJ_T0049314.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 680208 685016 - MGP_WSBEiJ_P0049314 Tcirg1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049315.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 683903 684907 - Tcirg1 protein_coding retained_intron MGP_WSBEiJ_T0049316.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 684154 689105 - Tcirg1 protein_coding retained_intron MGP_WSBEiJ_T0049317.1 MGP_WSBEiJ_G0023900.1 mouse_genomes_project 19 684354 686082 - Tcirg1 protein_coding retained_intron MGP_WSBEiJ_T0049603.1 MGP_WSBEiJ_G0023995.1 mouse_genomes_project 19 2678823 2696501 + MGP_WSBEiJ_P0049603 Ltbp3 protein_coding protein_coding MGP_WSBEiJ_T0010125.1 MGP_WSBEiJ_G0008282.1 mouse_genomes_project 19 3734168 3734227 - Mir5046 miRNA miRNA MGP_WSBEiJ_T0003775.1 MGP_WSBEiJ_G0003383.1 mouse_genomes_project 19 3539316 3541701 - antisense antisense MGP_WSBEiJ_T0003776.1 MGP_WSBEiJ_G0003383.1 mouse_genomes_project 19 3539394 3541478 - antisense antisense MGP_WSBEiJ_T0049971.1 MGP_WSBEiJ_G0024082.1 mouse_genomes_project 19 5894588 5896911 - MGP_WSBEiJ_P0049971 Gng3 protein_coding protein_coding MGP_WSBEiJ_T0050806.1 MGP_WSBEiJ_G0024417.1 mouse_genomes_project 19 42313779 42376085 + MGP_WSBEiJ_P0050806 Cnnm1 protein_coding protein_coding MGP_WSBEiJ_T0050807.1 MGP_WSBEiJ_G0024417.1 mouse_genomes_project 19 42313788 42376040 + MGP_WSBEiJ_P0050807 Cnnm1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050465.1 MGP_WSBEiJ_G0024294.1 mouse_genomes_project 19 27698512 27738725 - MGP_WSBEiJ_P0050465 Ermp1 protein_coding protein_coding MGP_WSBEiJ_T0050466.1 MGP_WSBEiJ_G0024294.1 mouse_genomes_project 19 27698516 27703772 - Ermp1 protein_coding processed_transcript MGP_WSBEiJ_T0050467.1 MGP_WSBEiJ_G0024294.1 mouse_genomes_project 19 27701738 27738497 - MGP_WSBEiJ_P0050467 Ermp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050468.1 MGP_WSBEiJ_G0024294.1 mouse_genomes_project 19 27703943 27736336 - MGP_WSBEiJ_P0050468 Ermp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050469.1 MGP_WSBEiJ_G0024294.1 mouse_genomes_project 19 27704158 27704761 - Ermp1 protein_coding retained_intron MGP_WSBEiJ_T0050470.1 MGP_WSBEiJ_G0024294.1 mouse_genomes_project 19 27718286 27729390 - Ermp1 protein_coding processed_transcript MGP_WSBEiJ_T0050471.1 MGP_WSBEiJ_G0024294.1 mouse_genomes_project 19 27719984 27738700 - Ermp1 protein_coding retained_intron MGP_WSBEiJ_T0050472.1 MGP_WSBEiJ_G0024294.1 mouse_genomes_project 19 27735018 27738688 - Ermp1 protein_coding retained_intron MGP_WSBEiJ_T0049939.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5809228 5823556 + MGP_WSBEiJ_P0049939 Nxf1 protein_coding protein_coding MGP_WSBEiJ_T0049940.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5809262 5825292 + MGP_WSBEiJ_P0049940 Nxf1 protein_coding protein_coding MGP_WSBEiJ_T0049941.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5809274 5820247 + Nxf1 protein_coding processed_transcript MGP_WSBEiJ_T0049942.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5809305 5817925 + MGP_WSBEiJ_P0049942 Nxf1 protein_coding protein_coding MGP_WSBEiJ_T0049943.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5809305 5816373 + MGP_WSBEiJ_P0049943 Nxf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049944.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5817567 5820030 + MGP_WSBEiJ_P0049944 Nxf1 protein_coding protein_coding MGP_WSBEiJ_T0049945.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5819310 5821801 + Nxf1 protein_coding retained_intron MGP_WSBEiJ_T0049946.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5819644 5820521 + Nxf1 protein_coding retained_intron MGP_WSBEiJ_T0049947.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5821268 5823483 + MGP_WSBEiJ_P0049947 Nxf1 protein_coding protein_coding MGP_WSBEiJ_T0049948.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5822725 5823555 + Nxf1 protein_coding processed_transcript MGP_WSBEiJ_T0049949.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5822769 5823496 + Nxf1 protein_coding retained_intron MGP_WSBEiJ_T0049950.1 MGP_WSBEiJ_G0024076.1 mouse_genomes_project 19 5823629 5825311 + MGP_WSBEiJ_P0049950 Nxf1 protein_coding protein_coding MGP_WSBEiJ_T0049997.1 MGP_WSBEiJ_G0024090.1 mouse_genomes_project 19 5963287 5982747 + MGP_WSBEiJ_P0049997 Ganab protein_coding protein_coding MGP_WSBEiJ_T0049998.1 MGP_WSBEiJ_G0024090.1 mouse_genomes_project 19 5963319 5982753 + MGP_WSBEiJ_P0049998 Ganab protein_coding unknown_likely_coding MGP_WSBEiJ_T0050679.1 MGP_WSBEiJ_G0024377.1 mouse_genomes_project 19 39046523 39270122 - MGP_WSBEiJ_P0050679 Sorbs1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050680.1 MGP_WSBEiJ_G0024377.1 mouse_genomes_project 19 39046523 39156531 - MGP_WSBEiJ_P0050680 Sorbs1 protein_coding protein_coding MGP_WSBEiJ_T0050681.1 MGP_WSBEiJ_G0024377.1 mouse_genomes_project 19 39046523 39156531 - MGP_WSBEiJ_P0050681 Sorbs1 protein_coding protein_coding MGP_WSBEiJ_T0050682.1 MGP_WSBEiJ_G0024377.1 mouse_genomes_project 19 39046523 39156531 - MGP_WSBEiJ_P0050682 Sorbs1 protein_coding protein_coding MGP_WSBEiJ_T0050683.1 MGP_WSBEiJ_G0024377.1 mouse_genomes_project 19 39046523 39156531 - MGP_WSBEiJ_P0050683 Sorbs1 protein_coding protein_coding MGP_WSBEiJ_T0050684.1 MGP_WSBEiJ_G0024377.1 mouse_genomes_project 19 39061002 39206484 - MGP_WSBEiJ_P0050684 Sorbs1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049904.1 MGP_WSBEiJ_G0024067.1 mouse_genomes_project 19 4749807 4772531 - MGP_WSBEiJ_P0049904 Slc22a26 protein_coding protein_coding MGP_WSBEiJ_T0049905.1 MGP_WSBEiJ_G0024067.1 mouse_genomes_project 19 4750746 4772620 - MGP_WSBEiJ_P0049905 Slc22a26 protein_coding protein_coding MGP_WSBEiJ_T0010136.1 MGP_WSBEiJ_G0008293.1 mouse_genomes_project 19 20895791 20895912 + Mir1192 miRNA miRNA MGP_WSBEiJ_T0050217.1 MGP_WSBEiJ_G0024186.1 mouse_genomes_project 19 9817254 9818319 + MGP_WSBEiJ_P0050217 Olfr1442 protein_coding protein_coding MGP_WSBEiJ_T0051270.1 MGP_WSBEiJ_G0024567.1 mouse_genomes_project 19 61052991 61059633 - MGP_WSBEiJ_P0051270 Csf2ra protein_coding protein_coding MGP_WSBEiJ_T0050408.1 MGP_WSBEiJ_G0024278.1 mouse_genomes_project 19 25363591 25400771 - MGP_WSBEiJ_P0050408 Pum3 protein_coding protein_coding MGP_WSBEiJ_T0003802.1 MGP_WSBEiJ_G0003403.1 mouse_genomes_project 19 55951413 55953392 + Gm17197 antisense antisense MGP_WSBEiJ_T0050035.1 MGP_WSBEiJ_G0024107.1 mouse_genomes_project 19 7174427 7188411 + MGP_WSBEiJ_P0050035 Fads1 protein_coding protein_coding MGP_WSBEiJ_T0050126.1 MGP_WSBEiJ_G0024141.1 mouse_genomes_project 19 8261014 8269639 - MGP_WSBEiJ_P0050126 Ms4a12 protein_coding protein_coding MGP_WSBEiJ_T0049823.1 MGP_WSBEiJ_G0024040.1 mouse_genomes_project 19 3839650 3850227 - MGP_WSBEiJ_P0049823 Kcnk4 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051184.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56650882 56841312 - MGP_WSBEiJ_P0051184 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051185.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56651039 56740874 - MGP_WSBEiJ_P0051185 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051186.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56651416 56740874 - MGP_WSBEiJ_P0051186 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051187.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56651423 56823120 - MGP_WSBEiJ_P0051187 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051188.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56654435 56867175 - MGP_WSBEiJ_P0051188 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051189.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56654570 56740872 - MGP_WSBEiJ_P0051189 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051190.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56654631 56740778 - MGP_WSBEiJ_P0051190 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051191.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56654836 56822945 - MGP_WSBEiJ_P0051191 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051192.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56655118 56867707 - MGP_WSBEiJ_P0051192 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051193.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56655156 56841245 - MGP_WSBEiJ_P0051193 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051194.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56655292 56822880 - MGP_WSBEiJ_P0051194 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051195.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56655334 56822985 - MGP_WSBEiJ_P0051195 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051196.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56655403 56944531 - Ablim1 protein_coding retained_intron MGP_WSBEiJ_T0051197.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56657574 56665911 - Ablim1 protein_coding processed_transcript MGP_WSBEiJ_T0051198.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56659181 56663618 - Ablim1 protein_coding retained_intron MGP_WSBEiJ_T0051199.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56679447 56758868 - Ablim1 protein_coding retained_intron MGP_WSBEiJ_T0051200.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56695312 56758837 - Ablim1 protein_coding processed_transcript MGP_WSBEiJ_T0051201.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56737911 56740889 - Ablim1 protein_coding processed_transcript MGP_WSBEiJ_T0051202.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56754425 56760354 - Ablim1 protein_coding processed_transcript MGP_WSBEiJ_T0051203.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56754767 56944523 - MGP_WSBEiJ_P0051203 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051204.1 MGP_WSBEiJ_G0024538.1 mouse_genomes_project 19 56755007 56807841 - MGP_WSBEiJ_P0051204 Ablim1 protein_coding protein_coding MGP_WSBEiJ_T0051218.1 MGP_WSBEiJ_G0024543.1 mouse_genomes_project 19 58190174 58235457 + MGP_WSBEiJ_P0051218 Ccdc172 protein_coding protein_coding MGP_WSBEiJ_T0050835.1 MGP_WSBEiJ_G0024427.1 mouse_genomes_project 19 42909829 42939466 - MGP_WSBEiJ_P0050835 Cyp2c44 protein_coding protein_coding MGP_WSBEiJ_T0050109.1 MGP_WSBEiJ_G0024134.1 mouse_genomes_project 19 7997769 8010153 - MGP_WSBEiJ_P0050109 Ms4a10 protein_coding protein_coding MGP_WSBEiJ_T0050110.1 MGP_WSBEiJ_G0024134.1 mouse_genomes_project 19 7997773 8010128 - MGP_WSBEiJ_P0050110 Ms4a10 protein_coding protein_coding MGP_WSBEiJ_T0050111.1 MGP_WSBEiJ_G0024134.1 mouse_genomes_project 19 7997776 8001347 - MGP_WSBEiJ_P0050111 Ms4a10 protein_coding protein_coding MGP_WSBEiJ_T0010159.1 MGP_WSBEiJ_G0008316.1 mouse_genomes_project 19 54722321 54722378 + Mir6715 miRNA miRNA MGP_WSBEiJ_T0049692.1 MGP_WSBEiJ_G0024019.1 mouse_genomes_project 19 3122217 3129010 - Arl2 protein_coding retained_intron MGP_WSBEiJ_T0049693.1 MGP_WSBEiJ_G0024019.1 mouse_genomes_project 19 3122226 3129276 - MGP_WSBEiJ_P0049693 Arl2 protein_coding protein_coding MGP_WSBEiJ_T0049694.1 MGP_WSBEiJ_G0024019.1 mouse_genomes_project 19 3125313 3126004 - Arl2 protein_coding retained_intron MGP_WSBEiJ_T0049923.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5790855 5807743 + MGP_WSBEiJ_P0049923 Stx5a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049924.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5790912 5792113 + Stx5a protein_coding retained_intron MGP_WSBEiJ_T0049925.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5790930 5807759 + MGP_WSBEiJ_P0049925 Stx5a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049926.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5790931 5807799 + MGP_WSBEiJ_P0049926 Stx5a protein_coding protein_coding MGP_WSBEiJ_T0049927.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5790954 5793969 + Stx5a protein_coding retained_intron MGP_WSBEiJ_T0049928.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5791111 5792303 + MGP_WSBEiJ_P0049928 Stx5a protein_coding protein_coding MGP_WSBEiJ_T0049929.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5791249 5800085 + MGP_WSBEiJ_P0049929 Stx5a protein_coding protein_coding MGP_WSBEiJ_T0049930.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5791330 5807799 + MGP_WSBEiJ_P0049930 Stx5a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049931.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5791586 5799201 + Stx5a protein_coding retained_intron MGP_WSBEiJ_T0049932.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5791715 5807225 + MGP_WSBEiJ_P0049932 Stx5a protein_coding protein_coding MGP_WSBEiJ_T0049933.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5792302 5799432 + Stx5a protein_coding retained_intron MGP_WSBEiJ_T0049934.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5798815 5807215 + Stx5a protein_coding retained_intron MGP_WSBEiJ_T0049935.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5798830 5800026 + Stx5a protein_coding retained_intron MGP_WSBEiJ_T0049936.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5798845 5807141 + Stx5a protein_coding retained_intron MGP_WSBEiJ_T0049937.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5798902 5799691 + Stx5a protein_coding retained_intron MGP_WSBEiJ_T0049938.1 MGP_WSBEiJ_G0024075.1 mouse_genomes_project 19 5799711 5800407 + MGP_WSBEiJ_P0049938 Stx5a protein_coding protein_coding MGP_WSBEiJ_T0050349.1 MGP_WSBEiJ_G0024257.1 mouse_genomes_project 19 21479911 21516514 + MGP_WSBEiJ_P0050349 Ptar1 protein_coding protein_coding MGP_WSBEiJ_T0050618.1 MGP_WSBEiJ_G0024351.1 mouse_genomes_project 19 36279738 36283459 + MGP_WSBEiJ_P0050618 Cyp26a1 protein_coding protein_coding MGP_WSBEiJ_T0050233.1 MGP_WSBEiJ_G0024194.1 mouse_genomes_project 19 10054912 10055956 - MGP_WSBEiJ_P0050233 Olfr1446 protein_coding protein_coding MGP_WSBEiJ_T0051164.1 MGP_WSBEiJ_G0024532.1 mouse_genomes_project 19 56148389 56201509 + MGP_WSBEiJ_P0051164 Nhlrc2 protein_coding protein_coding MGP_WSBEiJ_T0050036.1 MGP_WSBEiJ_G0024108.1 mouse_genomes_project 19 7191720 7197617 - MGP_WSBEiJ_P0050036 Fen1 protein_coding protein_coding MGP_WSBEiJ_T0050037.1 MGP_WSBEiJ_G0024108.1 mouse_genomes_project 19 7191726 7197390 - MGP_WSBEiJ_P0050037 Fen1 protein_coding protein_coding MGP_WSBEiJ_T0050038.1 MGP_WSBEiJ_G0024108.1 mouse_genomes_project 19 7191726 7197516 - MGP_WSBEiJ_P0050038 Fen1 protein_coding protein_coding MGP_WSBEiJ_T0050039.1 MGP_WSBEiJ_G0024108.1 mouse_genomes_project 19 7191730 7197341 - MGP_WSBEiJ_P0050039 Fen1 protein_coding protein_coding MGP_WSBEiJ_T0050543.1 MGP_WSBEiJ_G0024322.1 mouse_genomes_project 19 32606070 32620242 - MGP_WSBEiJ_P0050543 Acta2 protein_coding protein_coding MGP_WSBEiJ_T0049846.1 MGP_WSBEiJ_G0024051.1 mouse_genomes_project 19 3953309 3975945 - MGP_WSBEiJ_P0049846 protein_coding protein_coding MGP_WSBEiJ_T0050231.1 MGP_WSBEiJ_G0024192.1 mouse_genomes_project 19 10022834 10023864 + MGP_WSBEiJ_P0050231 Olfr1444 protein_coding protein_coding MGP_WSBEiJ_T0050399.1 MGP_WSBEiJ_G0024276.1 mouse_genomes_project 19 25185709 25218916 + Vldlr protein_coding retained_intron MGP_WSBEiJ_T0050400.1 MGP_WSBEiJ_G0024276.1 mouse_genomes_project 19 25186245 25204097 + MGP_WSBEiJ_P0050400 Vldlr protein_coding protein_coding MGP_WSBEiJ_T0050401.1 MGP_WSBEiJ_G0024276.1 mouse_genomes_project 19 25186245 25219023 + MGP_WSBEiJ_P0050401 Vldlr protein_coding protein_coding MGP_WSBEiJ_T0050402.1 MGP_WSBEiJ_G0024276.1 mouse_genomes_project 19 25186582 25200994 + Vldlr protein_coding processed_transcript MGP_WSBEiJ_T0050403.1 MGP_WSBEiJ_G0024276.1 mouse_genomes_project 19 25186582 25218888 + MGP_WSBEiJ_P0050403 Vldlr protein_coding protein_coding MGP_WSBEiJ_T0050404.1 MGP_WSBEiJ_G0024276.1 mouse_genomes_project 19 25186582 25223391 + MGP_WSBEiJ_P0050404 Vldlr protein_coding protein_coding MGP_WSBEiJ_T0050405.1 MGP_WSBEiJ_G0024276.1 mouse_genomes_project 19 25186683 25218924 + MGP_WSBEiJ_P0050405 Vldlr protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050406.1 MGP_WSBEiJ_G0024276.1 mouse_genomes_project 19 25208015 25212990 + MGP_WSBEiJ_P0050406 Vldlr protein_coding protein_coding MGP_WSBEiJ_T0050863.1 MGP_WSBEiJ_G0024437.1 mouse_genomes_project 19 43428092 43452276 + MGP_WSBEiJ_P0050863 Wnt8b protein_coding protein_coding MGP_WSBEiJ_T0049330.1 MGP_WSBEiJ_G0023907.1 mouse_genomes_project 19 794492 796016 + MGP_WSBEiJ_P0049330 Nudt8 protein_coding protein_coding MGP_WSBEiJ_T0049331.1 MGP_WSBEiJ_G0023907.1 mouse_genomes_project 19 794538 800405 + MGP_WSBEiJ_P0049331 Nudt8 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049332.1 MGP_WSBEiJ_G0023907.1 mouse_genomes_project 19 794543 796014 + MGP_WSBEiJ_P0049332 Nudt8 protein_coding protein_coding MGP_WSBEiJ_T0050124.1 MGP_WSBEiJ_G0024140.1 mouse_genomes_project 19 8214651 8247328 - MGP_WSBEiJ_P0050124 Ms4a13 protein_coding protein_coding MGP_WSBEiJ_T0050125.1 MGP_WSBEiJ_G0024140.1 mouse_genomes_project 19 8214652 8247342 - MGP_WSBEiJ_P0050125 Ms4a13 protein_coding protein_coding MGP_WSBEiJ_T0049398.1 MGP_WSBEiJ_G0023922.1 mouse_genomes_project 19 997627 1004313 - MGP_WSBEiJ_P0049398 Tbc1d10c protein_coding protein_coding MGP_WSBEiJ_T0051224.1 MGP_WSBEiJ_G0024548.1 mouse_genomes_project 19 58496886 58564675 - MGP_WSBEiJ_P0051224 Hspa12a protein_coding protein_coding MGP_WSBEiJ_T0050145.1 MGP_WSBEiJ_G0024149.1 mouse_genomes_project 19 8501906 8514254 + MGP_WSBEiJ_P0050145 Ms4a6c protein_coding protein_coding MGP_WSBEiJ_T0050146.1 MGP_WSBEiJ_G0024149.1 mouse_genomes_project 19 8501965 8505274 + Ms4a6c protein_coding retained_intron MGP_WSBEiJ_T0049536.1 MGP_WSBEiJ_G0023975.1 mouse_genomes_project 19 2378078 2378687 - MGP_WSBEiJ_P0049536 Ccdc85b protein_coding protein_coding MGP_WSBEiJ_T0051208.1 MGP_WSBEiJ_G0024541.1 mouse_genomes_project 19 57253344 57794954 + MGP_WSBEiJ_P0051208 Atrnl1 protein_coding protein_coding MGP_WSBEiJ_T0049605.1 MGP_WSBEiJ_G0023997.1 mouse_genomes_project 19 2795744 2825306 - MGP_WSBEiJ_P0049605 Frmd8 protein_coding protein_coding MGP_WSBEiJ_T0049606.1 MGP_WSBEiJ_G0023997.1 mouse_genomes_project 19 2812129 2813696 - Frmd8 protein_coding retained_intron MGP_WSBEiJ_T0049607.1 MGP_WSBEiJ_G0023997.1 mouse_genomes_project 19 2815197 2823460 - Frmd8 protein_coding retained_intron MGP_WSBEiJ_T0049608.1 MGP_WSBEiJ_G0023997.1 mouse_genomes_project 19 2815283 2825271 - MGP_WSBEiJ_P0049608 Frmd8 protein_coding protein_coding MGP_WSBEiJ_T0006981.1 MGP_WSBEiJ_G0005735.1 mouse_genomes_project 19 30590022 30591990 + 2700046G09Rik lincRNA lincRNA MGP_WSBEiJ_T0050081.1 MGP_WSBEiJ_G0024127.1 mouse_genomes_project 19 7867070 7870484 + Slc15a3 protein_coding processed_transcript MGP_WSBEiJ_T0050082.1 MGP_WSBEiJ_G0024127.1 mouse_genomes_project 19 7869887 7884948 + MGP_WSBEiJ_P0050082 Slc15a3 protein_coding protein_coding MGP_WSBEiJ_T0050083.1 MGP_WSBEiJ_G0024127.1 mouse_genomes_project 19 7869893 7870608 + Slc15a3 protein_coding processed_transcript MGP_WSBEiJ_T0050084.1 MGP_WSBEiJ_G0024127.1 mouse_genomes_project 19 7870031 7886395 + Slc15a3 protein_coding retained_intron MGP_WSBEiJ_T0051247.1 MGP_WSBEiJ_G0024561.1 mouse_genomes_project 19 60534984 60565899 - MGP_WSBEiJ_P0051247 Eif3a protein_coding protein_coding MGP_WSBEiJ_T0049627.1 MGP_WSBEiJ_G0024004.1 mouse_genomes_project 19 2958180 2992723 - MGP_WSBEiJ_P0049627 Capn1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049628.1 MGP_WSBEiJ_G0024004.1 mouse_genomes_project 19 2958190 2992035 - MGP_WSBEiJ_P0049628 Capn1 protein_coding protein_coding MGP_WSBEiJ_T0049629.1 MGP_WSBEiJ_G0024004.1 mouse_genomes_project 19 2958190 2991457 - MGP_WSBEiJ_P0049629 Capn1 protein_coding protein_coding MGP_WSBEiJ_T0006985.1 MGP_WSBEiJ_G0005738.1 mouse_genomes_project 19 34308493 34394447 - A830019P07Rik lincRNA lincRNA MGP_WSBEiJ_T0049879.1 MGP_WSBEiJ_G0024060.1 mouse_genomes_project 19 4388159 4396433 + MGP_WSBEiJ_P0049879 2700081O15Rik protein_coding protein_coding MGP_WSBEiJ_T0049880.1 MGP_WSBEiJ_G0024060.1 mouse_genomes_project 19 4389253 4391624 + 2700081O15Rik protein_coding retained_intron MGP_WSBEiJ_T0049881.1 MGP_WSBEiJ_G0024060.1 mouse_genomes_project 19 4390626 4393874 + MGP_WSBEiJ_P0049881 2700081O15Rik protein_coding protein_coding MGP_WSBEiJ_T0049882.1 MGP_WSBEiJ_G0024060.1 mouse_genomes_project 19 4390945 4393208 + MGP_WSBEiJ_P0049882 2700081O15Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049883.1 MGP_WSBEiJ_G0024060.1 mouse_genomes_project 19 4390955 4392860 + MGP_WSBEiJ_P0049883 2700081O15Rik protein_coding protein_coding MGP_WSBEiJ_T0049884.1 MGP_WSBEiJ_G0024060.1 mouse_genomes_project 19 4391563 4396069 + 2700081O15Rik protein_coding retained_intron MGP_WSBEiJ_T0013042.1 MGP_WSBEiJ_G0011172.1 mouse_genomes_project 19 13326592 13327148 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013031.1 MGP_WSBEiJ_G0011161.1 mouse_genomes_project 19 3025406 3025538 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050183.1 MGP_WSBEiJ_G0024161.1 mouse_genomes_project 19 8811360 8863149 - MGP_WSBEiJ_P0050183 Stx3 protein_coding protein_coding MGP_WSBEiJ_T0050184.1 MGP_WSBEiJ_G0024161.1 mouse_genomes_project 19 8811360 8862651 - MGP_WSBEiJ_P0050184 Stx3 protein_coding protein_coding MGP_WSBEiJ_T0050185.1 MGP_WSBEiJ_G0024161.1 mouse_genomes_project 19 8813969 8863149 - MGP_WSBEiJ_P0050185 Stx3 protein_coding protein_coding MGP_WSBEiJ_T0099308.1 MGP_WSBEiJ_G0037971.1 mouse_genomes_project 19 8991720 8991854 - Gm22272 snoRNA snoRNA MGP_WSBEiJ_T0050241.1 MGP_WSBEiJ_G0024202.1 mouse_genomes_project 19 10273750 10274656 - MGP_WSBEiJ_P0050241 Olfr1458 protein_coding protein_coding MGP_WSBEiJ_T0050136.1 MGP_WSBEiJ_G0024145.1 mouse_genomes_project 19 8371415 8386206 - MGP_WSBEiJ_P0050136 Ms4a7 protein_coding protein_coding MGP_WSBEiJ_T0050137.1 MGP_WSBEiJ_G0024145.1 mouse_genomes_project 19 8371415 8387655 - MGP_WSBEiJ_P0050137 Ms4a7 protein_coding protein_coding MGP_WSBEiJ_T0050138.1 MGP_WSBEiJ_G0024145.1 mouse_genomes_project 19 8371782 8387627 - MGP_WSBEiJ_P0050138 Ms4a7 protein_coding protein_coding MGP_WSBEiJ_T0050139.1 MGP_WSBEiJ_G0024145.1 mouse_genomes_project 19 8371785 8374930 - MGP_WSBEiJ_P0050139 Ms4a7 protein_coding protein_coding MGP_WSBEiJ_T0050140.1 MGP_WSBEiJ_G0024145.1 mouse_genomes_project 19 8371881 8387657 - Ms4a7 protein_coding retained_intron MGP_WSBEiJ_T0003792.1 MGP_WSBEiJ_G0003395.1 mouse_genomes_project 19 41363652 41386161 - Gm16541 antisense antisense MGP_WSBEiJ_T0003793.1 MGP_WSBEiJ_G0003395.1 mouse_genomes_project 19 41363658 41386148 - Gm16541 antisense antisense MGP_WSBEiJ_T0003794.1 MGP_WSBEiJ_G0003395.1 mouse_genomes_project 19 41385559 41386161 - Gm16541 antisense antisense MGP_WSBEiJ_T0050485.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28129904 28160040 + Uhrf2 protein_coding retained_intron MGP_WSBEiJ_T0050486.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28129904 28182825 + Uhrf2 protein_coding retained_intron MGP_WSBEiJ_T0050487.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28129904 28197099 + MGP_WSBEiJ_P0050487 Uhrf2 protein_coding protein_coding MGP_WSBEiJ_T0050488.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28129980 28158391 + MGP_WSBEiJ_P0050488 Uhrf2 protein_coding protein_coding MGP_WSBEiJ_T0050489.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28174989 28176749 + Uhrf2 protein_coding retained_intron MGP_WSBEiJ_T0050490.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28179809 28181551 + Uhrf2 protein_coding retained_intron MGP_WSBEiJ_T0050491.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28188133 28190709 + Uhrf2 protein_coding retained_intron MGP_WSBEiJ_T0050492.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28192448 28197099 + Uhrf2 protein_coding retained_intron MGP_WSBEiJ_T0050493.1 MGP_WSBEiJ_G0024300.1 mouse_genomes_project 19 28195335 28196314 + Uhrf2 protein_coding retained_intron MGP_WSBEiJ_T0051096.1 MGP_WSBEiJ_G0024515.1 mouse_genomes_project 19 53125508 53328746 + MGP_WSBEiJ_P0051096 Rbm20 protein_coding protein_coding MGP_WSBEiJ_T0051097.1 MGP_WSBEiJ_G0024515.1 mouse_genomes_project 19 53125508 53305461 + MGP_WSBEiJ_P0051097 Rbm20 protein_coding protein_coding MGP_WSBEiJ_T0051098.1 MGP_WSBEiJ_G0024515.1 mouse_genomes_project 19 53255754 53275499 + Rbm20 protein_coding processed_transcript MGP_WSBEiJ_T0051099.1 MGP_WSBEiJ_G0024515.1 mouse_genomes_project 19 53304907 53328746 + MGP_WSBEiJ_P0051099 Rbm20 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049267.1 MGP_WSBEiJ_G0023895.1 mouse_genomes_project 19 211892 333834 - MGP_WSBEiJ_P0049267 Ppp6r3 protein_coding protein_coding MGP_WSBEiJ_T0049268.1 MGP_WSBEiJ_G0023895.1 mouse_genomes_project 19 211892 333834 - MGP_WSBEiJ_P0049268 Ppp6r3 protein_coding protein_coding MGP_WSBEiJ_T0049269.1 MGP_WSBEiJ_G0023895.1 mouse_genomes_project 19 211892 333834 - MGP_WSBEiJ_P0049269 Ppp6r3 protein_coding protein_coding MGP_WSBEiJ_T0049456.1 MGP_WSBEiJ_G0023940.1 mouse_genomes_project 19 1607849 1614863 + protein_coding retained_intron MGP_WSBEiJ_T0049457.1 MGP_WSBEiJ_G0023940.1 mouse_genomes_project 19 1607870 1612611 + protein_coding processed_transcript MGP_WSBEiJ_T0049458.1 MGP_WSBEiJ_G0023940.1 mouse_genomes_project 19 1607871 1613329 + protein_coding retained_intron MGP_WSBEiJ_T0049459.1 MGP_WSBEiJ_G0023940.1 mouse_genomes_project 19 1613382 1619054 + protein_coding retained_intron MGP_WSBEiJ_T0049460.1 MGP_WSBEiJ_G0023940.1 mouse_genomes_project 19 1616451 1617630 + protein_coding processed_transcript MGP_WSBEiJ_T0051209.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 57900368 58132429 - MGP_WSBEiJ_P0051209 Gfra1 protein_coding protein_coding MGP_WSBEiJ_T0051210.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 57900376 58131623 - MGP_WSBEiJ_P0051210 Gfra1 protein_coding protein_coding MGP_WSBEiJ_T0051211.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 57901456 58131497 - MGP_WSBEiJ_P0051211 Gfra1 protein_coding protein_coding MGP_WSBEiJ_T0051212.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 57902939 58132390 - MGP_WSBEiJ_P0051212 Gfra1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051213.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 57902939 58132332 - MGP_WSBEiJ_P0051213 Gfra1 protein_coding protein_coding MGP_WSBEiJ_T0051214.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 58130365 58132037 - MGP_WSBEiJ_P0051214 Gfra1 protein_coding protein_coding MGP_WSBEiJ_T0051215.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 58130382 58132940 - MGP_WSBEiJ_P0051215 Gfra1 protein_coding protein_coding MGP_WSBEiJ_T0051216.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 58130451 58131651 - MGP_WSBEiJ_P0051216 Gfra1 protein_coding protein_coding MGP_WSBEiJ_T0051217.1 MGP_WSBEiJ_G0024542.1 mouse_genomes_project 19 58131354 58132192 - MGP_WSBEiJ_P0051217 Gfra1 protein_coding protein_coding MGP_WSBEiJ_T0050018.1 MGP_WSBEiJ_G0024099.1 mouse_genomes_project 19 6186675 6223469 - MGP_WSBEiJ_P0050018 Asrgl1 protein_coding protein_coding MGP_WSBEiJ_T0050019.1 MGP_WSBEiJ_G0024099.1 mouse_genomes_project 19 6213515 6223364 - Asrgl1 protein_coding processed_transcript MGP_WSBEiJ_T0049348.1 MGP_WSBEiJ_G0023911.1 mouse_genomes_project 19 864454 866424 - MGP_WSBEiJ_P0049348 BC021614 protein_coding protein_coding MGP_WSBEiJ_T0049349.1 MGP_WSBEiJ_G0023911.1 mouse_genomes_project 19 864455 866273 - MGP_WSBEiJ_P0049349 BC021614 protein_coding protein_coding MGP_WSBEiJ_T0010122.1 MGP_WSBEiJ_G0008279.1 mouse_genomes_project 19 3262250 3262339 + Mir192 miRNA miRNA MGP_WSBEiJ_T0098069.1 MGP_WSBEiJ_G0036732.1 mouse_genomes_project 19 24188206 24188331 - Gm25176 snRNA snRNA MGP_WSBEiJ_T0049701.1 MGP_WSBEiJ_G0024021.1 mouse_genomes_project 19 3178187 3219596 + MGP_WSBEiJ_P0049701 Majin protein_coding protein_coding MGP_WSBEiJ_T0049702.1 MGP_WSBEiJ_G0024021.1 mouse_genomes_project 19 3178268 3219602 + MGP_WSBEiJ_P0049702 Majin protein_coding protein_coding MGP_WSBEiJ_T0049554.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2406471 2412882 - MGP_WSBEiJ_P0049554 Mus81 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049555.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2406958 2413268 - MGP_WSBEiJ_P0049555 Mus81 protein_coding protein_coding MGP_WSBEiJ_T0049556.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2406977 2412801 - Mus81 protein_coding retained_intron MGP_WSBEiJ_T0049557.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2406980 2408833 - Mus81 protein_coding retained_intron MGP_WSBEiJ_T0049558.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2406984 2413151 - MGP_WSBEiJ_P0049558 Mus81 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049559.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2408555 2409751 - Mus81 protein_coding retained_intron MGP_WSBEiJ_T0049560.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2409077 2410676 - Mus81 protein_coding processed_transcript MGP_WSBEiJ_T0049561.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2410353 2413132 - MGP_WSBEiJ_P0049561 Mus81 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049562.1 MGP_WSBEiJ_G0023979.1 mouse_genomes_project 19 2412333 2413177 - Mus81 protein_coding retained_intron MGP_WSBEiJ_T0050245.1 MGP_WSBEiJ_G0024206.1 mouse_genomes_project 19 10413065 10413998 + MGP_WSBEiJ_P0050245 Olfr1463 protein_coding protein_coding MGP_WSBEiJ_T0049575.1 MGP_WSBEiJ_G0023988.1 mouse_genomes_project 19 2587506 2600044 - MGP_WSBEiJ_P0049575 Sipa1 protein_coding protein_coding MGP_WSBEiJ_T0049576.1 MGP_WSBEiJ_G0023988.1 mouse_genomes_project 19 2587506 2600044 - MGP_WSBEiJ_P0049576 Sipa1 protein_coding protein_coding MGP_WSBEiJ_T0049577.1 MGP_WSBEiJ_G0023988.1 mouse_genomes_project 19 2587506 2600044 - MGP_WSBEiJ_P0049577 Sipa1 protein_coding protein_coding MGP_WSBEiJ_T0049578.1 MGP_WSBEiJ_G0023988.1 mouse_genomes_project 19 2587506 2600044 - MGP_WSBEiJ_P0049578 Sipa1 protein_coding protein_coding MGP_WSBEiJ_T0099304.1 MGP_WSBEiJ_G0037967.1 mouse_genomes_project 19 5772716 5772783 + Gm23246 snoRNA snoRNA MGP_WSBEiJ_T0050442.1 MGP_WSBEiJ_G0024286.1 mouse_genomes_project 19 27158271 27203950 + MGP_WSBEiJ_P0050442 Rcl1 protein_coding protein_coding MGP_WSBEiJ_T0050742.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40743027 40784276 - MGP_WSBEiJ_P0050742 Mms19 protein_coding protein_coding MGP_WSBEiJ_T0050743.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40743027 40784233 - MGP_WSBEiJ_P0050743 Mms19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050744.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40746168 40767828 - Mms19 protein_coding retained_intron MGP_WSBEiJ_T0050745.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40746172 40772845 - MGP_WSBEiJ_P0050745 Mms19 protein_coding protein_coding MGP_WSBEiJ_T0050746.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40746174 40784255 - MGP_WSBEiJ_P0050746 Mms19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050747.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40746174 40784236 - MGP_WSBEiJ_P0050747 Mms19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050748.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40746340 40784251 - MGP_WSBEiJ_P0050748 Mms19 protein_coding protein_coding MGP_WSBEiJ_T0050749.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40746452 40758321 - MGP_WSBEiJ_P0050749 Mms19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050750.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40746512 40747591 - Mms19 protein_coding retained_intron MGP_WSBEiJ_T0050751.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40749047 40784258 - Mms19 protein_coding retained_intron MGP_WSBEiJ_T0050752.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40749235 40757127 - MGP_WSBEiJ_P0050752 Mms19 protein_coding protein_coding MGP_WSBEiJ_T0050753.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40749420 40750488 - Mms19 protein_coding retained_intron MGP_WSBEiJ_T0050754.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40749930 40784256 - MGP_WSBEiJ_P0050754 Mms19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050755.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40752907 40754525 - Mms19 protein_coding retained_intron MGP_WSBEiJ_T0050756.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40756279 40784249 - MGP_WSBEiJ_P0050756 Mms19 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050757.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40757639 40758350 - Mms19 protein_coding retained_intron MGP_WSBEiJ_T0050758.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40765979 40766307 - Mms19 protein_coding retained_intron MGP_WSBEiJ_T0050759.1 MGP_WSBEiJ_G0024399.1 mouse_genomes_project 19 40766187 40772864 - MGP_WSBEiJ_P0050759 Mms19 protein_coding protein_coding MGP_WSBEiJ_T0049834.1 MGP_WSBEiJ_G0024043.1 mouse_genomes_project 19 3872028 3889980 - MGP_WSBEiJ_P0049834 Plcb3 protein_coding protein_coding MGP_WSBEiJ_T0050335.1 MGP_WSBEiJ_G0024250.1 mouse_genomes_project 19 19370845 19403837 + MGP_WSBEiJ_P0050335 Abhd17b protein_coding protein_coding MGP_WSBEiJ_T0050398.1 MGP_WSBEiJ_G0024275.1 mouse_genomes_project 19 24837097 24839804 + MGP_WSBEiJ_P0050398 Gm815 protein_coding protein_coding MGP_WSBEiJ_T0096805.1 MGP_WSBEiJ_G0035486.1 mouse_genomes_project 19 10250571 10251076 - pseudogene pseudogene MGP_WSBEiJ_T0010153.1 MGP_WSBEiJ_G0008310.1 mouse_genomes_project 19 46456597 46456668 - Mir6995 miRNA miRNA MGP_WSBEiJ_T0051141.1 MGP_WSBEiJ_G0024527.1 mouse_genomes_project 19 55866962 55902938 + MGP_WSBEiJ_P0051141 Habp2 protein_coding protein_coding MGP_WSBEiJ_T0051142.1 MGP_WSBEiJ_G0024527.1 mouse_genomes_project 19 55867747 55903665 + MGP_WSBEiJ_P0051142 Habp2 protein_coding protein_coding MGP_WSBEiJ_T0051143.1 MGP_WSBEiJ_G0024527.1 mouse_genomes_project 19 55867761 55894070 + Habp2 protein_coding processed_transcript MGP_WSBEiJ_T0051144.1 MGP_WSBEiJ_G0024527.1 mouse_genomes_project 19 55867821 55902485 + MGP_WSBEiJ_P0051144 Habp2 protein_coding protein_coding MGP_WSBEiJ_T0051145.1 MGP_WSBEiJ_G0024527.1 mouse_genomes_project 19 55867821 55899143 + MGP_WSBEiJ_P0051145 Habp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051146.1 MGP_WSBEiJ_G0024527.1 mouse_genomes_project 19 55893895 55899265 + MGP_WSBEiJ_P0051146 Habp2 protein_coding protein_coding MGP_WSBEiJ_T0051147.1 MGP_WSBEiJ_G0024527.1 mouse_genomes_project 19 55895027 55902479 + MGP_WSBEiJ_P0051147 Habp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0003797.1 MGP_WSBEiJ_G0003398.1 mouse_genomes_project 19 44151208 44156266 - Tlx1os antisense antisense MGP_WSBEiJ_T0051100.1 MGP_WSBEiJ_G0024516.1 mouse_genomes_project 19 53353650 53393588 + MGP_WSBEiJ_P0051100 Pdcd4 protein_coding protein_coding MGP_WSBEiJ_T0051101.1 MGP_WSBEiJ_G0024516.1 mouse_genomes_project 19 53364775 53393588 + MGP_WSBEiJ_P0051101 Pdcd4 protein_coding protein_coding MGP_WSBEiJ_T0051102.1 MGP_WSBEiJ_G0024516.1 mouse_genomes_project 19 53364775 53393588 + MGP_WSBEiJ_P0051102 Pdcd4 protein_coding protein_coding MGP_WSBEiJ_T0049951.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5825357 5827304 - MGP_WSBEiJ_P0049951 Taf6l protein_coding protein_coding MGP_WSBEiJ_T0049952.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5827190 5841403 - MGP_WSBEiJ_P0049952 Taf6l protein_coding protein_coding MGP_WSBEiJ_T0049953.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5827323 5829799 - Taf6l protein_coding retained_intron MGP_WSBEiJ_T0049954.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5827328 5841344 - MGP_WSBEiJ_P0049954 Taf6l protein_coding protein_coding MGP_WSBEiJ_T0049955.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5827330 5841403 - MGP_WSBEiJ_P0049955 Taf6l protein_coding protein_coding MGP_WSBEiJ_T0049956.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5827332 5841504 - MGP_WSBEiJ_P0049956 Taf6l protein_coding protein_coding MGP_WSBEiJ_T0049957.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5827365 5839085 - MGP_WSBEiJ_P0049957 Taf6l protein_coding protein_coding MGP_WSBEiJ_T0049958.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5827365 5839085 - MGP_WSBEiJ_P0049958 Taf6l protein_coding protein_coding MGP_WSBEiJ_T0049959.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5828273 5832633 - Taf6l protein_coding retained_intron MGP_WSBEiJ_T0049960.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5831497 5841368 - Taf6l protein_coding retained_intron MGP_WSBEiJ_T0049961.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5832133 5837409 - Taf6l protein_coding processed_transcript MGP_WSBEiJ_T0049962.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5832159 5837763 - Taf6l protein_coding retained_intron MGP_WSBEiJ_T0049963.1 MGP_WSBEiJ_G0024077.1 mouse_genomes_project 19 5836896 5841352 - Taf6l protein_coding retained_intron MGP_WSBEiJ_T0000988.1 MGP_WSBEiJ_G0000923.1 mouse_genomes_project 19 11996908 11997175 + TEC TEC MGP_WSBEiJ_T0097305.1 MGP_WSBEiJ_G0035980.1 mouse_genomes_project 19 31989463 32001358 - Gm8978 sense_intronic sense_intronic MGP_WSBEiJ_T0050484.1 MGP_WSBEiJ_G0024299.1 mouse_genomes_project 19 28098807 28101036 + MGP_WSBEiJ_P0050484 Trpd52l3 protein_coding protein_coding MGP_WSBEiJ_T0049468.1 MGP_WSBEiJ_G0023942.1 mouse_genomes_project 19 1655675 1667100 - MGP_WSBEiJ_P0049468 Rbm14 protein_coding protein_coding MGP_WSBEiJ_T0049469.1 MGP_WSBEiJ_G0023942.1 mouse_genomes_project 19 1656028 1667051 - MGP_WSBEiJ_P0049469 Rbm14 protein_coding protein_coding MGP_WSBEiJ_T0049470.1 MGP_WSBEiJ_G0023942.1 mouse_genomes_project 19 1656883 1666978 - MGP_WSBEiJ_P0049470 Rbm14 protein_coding protein_coding MGP_WSBEiJ_T0050771.1 MGP_WSBEiJ_G0024407.1 mouse_genomes_project 19 40962964 40967276 + MGP_WSBEiJ_P0050771 Marveld1 protein_coding protein_coding MGP_WSBEiJ_T0050772.1 MGP_WSBEiJ_G0024407.1 mouse_genomes_project 19 40963281 40967035 + MGP_WSBEiJ_P0050772 Marveld1 protein_coding protein_coding MGP_WSBEiJ_T0050264.1 MGP_WSBEiJ_G0024225.1 mouse_genomes_project 19 11778217 11932570 - MGP_WSBEiJ_P0050264 Tle4 protein_coding protein_coding MGP_WSBEiJ_T0050265.1 MGP_WSBEiJ_G0024225.1 mouse_genomes_project 19 11778295 11932638 - MGP_WSBEiJ_P0050265 Tle4 protein_coding protein_coding MGP_WSBEiJ_T0007010.1 MGP_WSBEiJ_G0005756.1 mouse_genomes_project 19 59215997 59288996 + 2700089I24Rik lincRNA lincRNA MGP_WSBEiJ_T0011272.1 MGP_WSBEiJ_G0009429.1 mouse_genomes_project 19 2790681 2790791 - Gm27505 misc_RNA misc_RNA MGP_WSBEiJ_T0050327.1 MGP_WSBEiJ_G0024249.1 mouse_genomes_project 19 19298261 19370265 - MGP_WSBEiJ_P0050327 1110059E24Rik protein_coding protein_coding MGP_WSBEiJ_T0050328.1 MGP_WSBEiJ_G0024249.1 mouse_genomes_project 19 19315424 19370337 - MGP_WSBEiJ_P0050328 1110059E24Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050329.1 MGP_WSBEiJ_G0024249.1 mouse_genomes_project 19 19315893 19348009 - MGP_WSBEiJ_P0050329 1110059E24Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050330.1 MGP_WSBEiJ_G0024249.1 mouse_genomes_project 19 19315913 19370245 - MGP_WSBEiJ_P0050330 1110059E24Rik protein_coding protein_coding MGP_WSBEiJ_T0050331.1 MGP_WSBEiJ_G0024249.1 mouse_genomes_project 19 19316048 19370454 - MGP_WSBEiJ_P0050331 1110059E24Rik protein_coding protein_coding MGP_WSBEiJ_T0050332.1 MGP_WSBEiJ_G0024249.1 mouse_genomes_project 19 19316537 19321685 - 1110059E24Rik protein_coding processed_transcript MGP_WSBEiJ_T0050333.1 MGP_WSBEiJ_G0024249.1 mouse_genomes_project 19 19316549 19370147 - MGP_WSBEiJ_P0050333 1110059E24Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050334.1 MGP_WSBEiJ_G0024249.1 mouse_genomes_project 19 19332572 19370330 - 1110059E24Rik protein_coding retained_intron MGP_WSBEiJ_T0051048.1 MGP_WSBEiJ_G0024498.1 mouse_genomes_project 19 46841720 46888693 - MGP_WSBEiJ_P0051048 Col17a1 protein_coding protein_coding MGP_WSBEiJ_T0051049.1 MGP_WSBEiJ_G0024498.1 mouse_genomes_project 19 46841720 46888693 - MGP_WSBEiJ_P0051049 Col17a1 protein_coding protein_coding MGP_WSBEiJ_T0051050.1 MGP_WSBEiJ_G0024498.1 mouse_genomes_project 19 46843476 46844972 - Col17a1 protein_coding processed_transcript MGP_WSBEiJ_T0050859.1 MGP_WSBEiJ_G0024434.1 mouse_genomes_project 19 43204659 43217816 + MGP_WSBEiJ_P0050859 Scd2 protein_coding protein_coding MGP_WSBEiJ_T0050697.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39372415 39374164 + Entpd1 protein_coding processed_transcript MGP_WSBEiJ_T0050698.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39372438 39375837 + Entpd1 protein_coding processed_transcript MGP_WSBEiJ_T0050699.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39372446 39509744 + MGP_WSBEiJ_P0050699 Entpd1 protein_coding protein_coding MGP_WSBEiJ_T0050700.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39422731 39511552 + MGP_WSBEiJ_P0050700 Entpd1 protein_coding protein_coding MGP_WSBEiJ_T0050701.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39422760 39494248 + MGP_WSBEiJ_P0050701 Entpd1 protein_coding protein_coding MGP_WSBEiJ_T0050702.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39422805 39509033 + MGP_WSBEiJ_P0050702 Entpd1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050703.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39423159 39478212 + Entpd1 protein_coding processed_transcript MGP_WSBEiJ_T0050704.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39423450 39492311 + Entpd1 protein_coding processed_transcript MGP_WSBEiJ_T0050705.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39446380 39492407 + Entpd1 protein_coding processed_transcript MGP_WSBEiJ_T0050706.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39495290 39509705 + MGP_WSBEiJ_P0050706 Entpd1 protein_coding protein_coding MGP_WSBEiJ_T0050707.1 MGP_WSBEiJ_G0024380.1 mouse_genomes_project 19 39506133 39506815 + Entpd1 protein_coding processed_transcript MGP_WSBEiJ_T0051068.1 MGP_WSBEiJ_G0024505.1 mouse_genomes_project 19 49313363 49314999 - MGP_WSBEiJ_P0051068 Rpl13a-ps1 protein_coding protein_coding MGP_WSBEiJ_T0050143.1 MGP_WSBEiJ_G0024148.1 mouse_genomes_project 19 8482324 8540598 + protein_coding retained_intron MGP_WSBEiJ_T0050144.1 MGP_WSBEiJ_G0024148.1 mouse_genomes_project 19 8482324 8541916 + protein_coding retained_intron MGP_WSBEiJ_T0050154.1 MGP_WSBEiJ_G0024148.1 mouse_genomes_project 19 8541678 8600132 + protein_coding processed_transcript MGP_WSBEiJ_T0050161.1 MGP_WSBEiJ_G0024148.1 mouse_genomes_project 19 8597994 8600132 + protein_coding retained_intron MGP_WSBEiJ_T0050162.1 MGP_WSBEiJ_G0024148.1 mouse_genomes_project 19 8599328 8600132 + protein_coding retained_intron MGP_WSBEiJ_T0051026.1 MGP_WSBEiJ_G0024491.1 mouse_genomes_project 19 46300747 46303902 - MGP_WSBEiJ_P0051026 Calhm1 protein_coding protein_coding MGP_WSBEiJ_T0051001.1 MGP_WSBEiJ_G0024478.1 mouse_genomes_project 19 45687506 45714065 + MGP_WSBEiJ_P0051001 Sfxn2 protein_coding protein_coding MGP_WSBEiJ_T0049847.1 MGP_WSBEiJ_G0024052.1 mouse_genomes_project 19 3996942 4140720 + MGP_WSBEiJ_P0049847 Macrod1 protein_coding protein_coding MGP_WSBEiJ_T0050373.1 MGP_WSBEiJ_G0024271.1 mouse_genomes_project 19 23405866 23515680 + MGP_WSBEiJ_P0050373 Dmrt1 protein_coding protein_coding MGP_WSBEiJ_T0050374.1 MGP_WSBEiJ_G0024271.1 mouse_genomes_project 19 23405954 23513584 + MGP_WSBEiJ_P0050374 Dmrt1 protein_coding protein_coding MGP_WSBEiJ_T0050375.1 MGP_WSBEiJ_G0024271.1 mouse_genomes_project 19 23405955 23467019 + Dmrt1 protein_coding processed_transcript MGP_WSBEiJ_T0010127.1 MGP_WSBEiJ_G0008284.1 mouse_genomes_project 19 4393108 4393178 + Mir6991 miRNA miRNA MGP_WSBEiJ_T0049399.1 MGP_WSBEiJ_G0023923.1 mouse_genomes_project 19 1005276 1010223 + MGP_WSBEiJ_P0049399 Ppp1ca protein_coding protein_coding MGP_WSBEiJ_T0010116.1 MGP_WSBEiJ_G0008273.1 mouse_genomes_project 19 1089626 1089687 - Mir6985 miRNA miRNA MGP_WSBEiJ_T0050560.1 MGP_WSBEiJ_G0024334.1 mouse_genomes_project 19 33327804 33384789 + MGP_WSBEiJ_P0050560 Kif20b protein_coding unknown_likely_coding MGP_WSBEiJ_T0050561.1 MGP_WSBEiJ_G0024334.1 mouse_genomes_project 19 33327841 33384950 + MGP_WSBEiJ_P0050561 Kif20b protein_coding protein_coding MGP_WSBEiJ_T0049337.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 802086 802602 - Ndufv1 protein_coding retained_intron MGP_WSBEiJ_T0049338.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 802087 807205 - MGP_WSBEiJ_P0049338 Ndufv1 protein_coding protein_coding MGP_WSBEiJ_T0049339.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 802145 807256 - MGP_WSBEiJ_P0049339 Ndufv1 protein_coding protein_coding MGP_WSBEiJ_T0049340.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 802878 804431 - Ndufv1 protein_coding retained_intron MGP_WSBEiJ_T0049341.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 802948 803724 - Ndufv1 protein_coding retained_intron MGP_WSBEiJ_T0049342.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 803336 807287 - Ndufv1 protein_coding retained_intron MGP_WSBEiJ_T0049343.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 803950 807291 - MGP_WSBEiJ_P0049343 Ndufv1 protein_coding protein_coding MGP_WSBEiJ_T0049344.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 804001 807248 - MGP_WSBEiJ_P0049344 Ndufv1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049345.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 804045 807342 - MGP_WSBEiJ_P0049345 Ndufv1 protein_coding protein_coding MGP_WSBEiJ_T0049346.1 MGP_WSBEiJ_G0023909.1 mouse_genomes_project 19 804584 807244 - Ndufv1 protein_coding retained_intron MGP_WSBEiJ_T0003771.1 MGP_WSBEiJ_G0003381.1 mouse_genomes_project 19 2791666 2797431 + Frmd8os antisense antisense MGP_WSBEiJ_T0003772.1 MGP_WSBEiJ_G0003381.1 mouse_genomes_project 19 2794550 2797415 + Frmd8os antisense antisense MGP_WSBEiJ_T0050544.1 MGP_WSBEiJ_G0024323.1 mouse_genomes_project 19 32656601 32693398 + MGP_WSBEiJ_P0050544 Fas protein_coding protein_coding MGP_WSBEiJ_T0050545.1 MGP_WSBEiJ_G0024323.1 mouse_genomes_project 19 32656601 32675243 + MGP_WSBEiJ_P0050545 Fas protein_coding protein_coding MGP_WSBEiJ_T0050609.1 MGP_WSBEiJ_G0024346.1 mouse_genomes_project 19 35822226 35917283 - MGP_WSBEiJ_P0050609 Ide protein_coding protein_coding MGP_WSBEiJ_T0050610.1 MGP_WSBEiJ_G0024346.1 mouse_genomes_project 19 35823918 35858775 - Ide protein_coding processed_transcript MGP_WSBEiJ_T0050611.1 MGP_WSBEiJ_G0024346.1 mouse_genomes_project 19 35834071 35844367 - Ide protein_coding retained_intron MGP_WSBEiJ_T0050612.1 MGP_WSBEiJ_G0024346.1 mouse_genomes_project 19 35854729 35864956 - Ide protein_coding processed_transcript MGP_WSBEiJ_T0050613.1 MGP_WSBEiJ_G0024346.1 mouse_genomes_project 19 35855033 35890415 - Ide protein_coding retained_intron MGP_WSBEiJ_T0050593.1 MGP_WSBEiJ_G0024343.1 mouse_genomes_project 19 35463583 35553592 + MGP_WSBEiJ_P0050593 Btaf1 protein_coding protein_coding MGP_WSBEiJ_T0096807.1 MGP_WSBEiJ_G0035488.1 mouse_genomes_project 19 59981450 59982796 + pseudogene pseudogene MGP_WSBEiJ_T0006982.1 MGP_WSBEiJ_G0005736.1 mouse_genomes_project 19 32845797 32847608 + Gm26902 lincRNA lincRNA MGP_WSBEiJ_T0006983.1 MGP_WSBEiJ_G0005736.1 mouse_genomes_project 19 32845822 32853212 + Gm26902 lincRNA lincRNA MGP_WSBEiJ_T0049671.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3066609 3070785 - MGP_WSBEiJ_P0049671 Zfpl1 protein_coding protein_coding MGP_WSBEiJ_T0049672.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3066612 3068674 - Zfpl1 protein_coding retained_intron MGP_WSBEiJ_T0049673.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3067015 3070757 - MGP_WSBEiJ_P0049673 Zfpl1 protein_coding protein_coding MGP_WSBEiJ_T0049674.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3067707 3070535 - MGP_WSBEiJ_P0049674 Zfpl1 protein_coding protein_coding MGP_WSBEiJ_T0049675.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3068037 3070736 - Zfpl1 protein_coding retained_intron MGP_WSBEiJ_T0049676.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3068057 3070746 - MGP_WSBEiJ_P0049676 Zfpl1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049677.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3068098 3070149 - Zfpl1 protein_coding retained_intron MGP_WSBEiJ_T0049678.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3068103 3070786 - MGP_WSBEiJ_P0049678 Zfpl1 protein_coding protein_coding MGP_WSBEiJ_T0049679.1 MGP_WSBEiJ_G0024014.1 mouse_genomes_project 19 3068448 3070769 - MGP_WSBEiJ_P0049679 Zfpl1 protein_coding protein_coding MGP_WSBEiJ_T0050192.1 MGP_WSBEiJ_G0024168.1 mouse_genomes_project 19 9175280 9176509 - MGP_WSBEiJ_P0050192 protein_coding protein_coding MGP_WSBEiJ_T0050181.1 MGP_WSBEiJ_G0024159.1 mouse_genomes_project 19 8783195 8799710 + MGP_WSBEiJ_P0050181 Gif protein_coding protein_coding MGP_WSBEiJ_T0049450.1 MGP_WSBEiJ_G0023936.1 mouse_genomes_project 19 1468952 1472019 - MGP_WSBEiJ_P0049450 Rce1 protein_coding protein_coding MGP_WSBEiJ_T0010128.1 MGP_WSBEiJ_G0008285.1 mouse_genomes_project 19 5792413 5792522 + Mir6992 miRNA miRNA MGP_WSBEiJ_T0050717.1 MGP_WSBEiJ_G0024385.1 mouse_genomes_project 19 39842942 39860405 - MGP_WSBEiJ_P0050717 Opalin protein_coding protein_coding MGP_WSBEiJ_T0051177.1 MGP_WSBEiJ_G0024537.1 mouse_genomes_project 19 56526308 56624779 - MGP_WSBEiJ_P0051177 Afap1l2 protein_coding protein_coding MGP_WSBEiJ_T0051178.1 MGP_WSBEiJ_G0024537.1 mouse_genomes_project 19 56526308 56624749 - MGP_WSBEiJ_P0051178 Afap1l2 protein_coding protein_coding MGP_WSBEiJ_T0051179.1 MGP_WSBEiJ_G0024537.1 mouse_genomes_project 19 56526308 56624761 - MGP_WSBEiJ_P0051179 Afap1l2 protein_coding protein_coding MGP_WSBEiJ_T0051180.1 MGP_WSBEiJ_G0024537.1 mouse_genomes_project 19 56534345 56542506 - Afap1l2 protein_coding retained_intron MGP_WSBEiJ_T0051181.1 MGP_WSBEiJ_G0024537.1 mouse_genomes_project 19 56537492 56624779 - MGP_WSBEiJ_P0051181 Afap1l2 protein_coding protein_coding MGP_WSBEiJ_T0051182.1 MGP_WSBEiJ_G0024537.1 mouse_genomes_project 19 56544008 56616447 - MGP_WSBEiJ_P0051182 Afap1l2 protein_coding protein_coding MGP_WSBEiJ_T0051183.1 MGP_WSBEiJ_G0024537.1 mouse_genomes_project 19 56557199 56624759 - Afap1l2 protein_coding retained_intron MGP_WSBEiJ_T0049401.1 MGP_WSBEiJ_G0023925.1 mouse_genomes_project 19 1030315 1040926 + MGP_WSBEiJ_P0049401 Clcf1 protein_coding protein_coding MGP_WSBEiJ_T0049402.1 MGP_WSBEiJ_G0023925.1 mouse_genomes_project 19 1030341 1040926 + Clcf1 protein_coding retained_intron MGP_WSBEiJ_T0049403.1 MGP_WSBEiJ_G0023925.1 mouse_genomes_project 19 1030382 1040926 + MGP_WSBEiJ_P0049403 Clcf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049404.1 MGP_WSBEiJ_G0023925.1 mouse_genomes_project 19 1030671 1039949 + Clcf1 protein_coding processed_transcript MGP_WSBEiJ_T0050573.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35067613 35138784 + MGP_WSBEiJ_P0050573 Hectd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050574.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35067648 35136785 + MGP_WSBEiJ_P0050574 Hectd2 protein_coding protein_coding MGP_WSBEiJ_T0050575.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35067649 35105746 + Hectd2 protein_coding retained_intron MGP_WSBEiJ_T0050576.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35067649 35137607 + MGP_WSBEiJ_P0050576 Hectd2 protein_coding protein_coding MGP_WSBEiJ_T0050577.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35067658 35112636 + Hectd2 protein_coding retained_intron MGP_WSBEiJ_T0050578.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35067809 35082677 + Hectd2 protein_coding retained_intron MGP_WSBEiJ_T0050579.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35067840 35135383 + MGP_WSBEiJ_P0050579 Hectd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050580.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35100122 35135383 + MGP_WSBEiJ_P0050580 Hectd2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050581.1 MGP_WSBEiJ_G0024339.1 mouse_genomes_project 19 35120426 35127689 + Hectd2 protein_coding retained_intron MGP_WSBEiJ_T0051229.1 MGP_WSBEiJ_G0024550.1 mouse_genomes_project 19 58679959 58782144 - MGP_WSBEiJ_P0051229 Shtn1 protein_coding protein_coding MGP_WSBEiJ_T0050583.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35363142 35424960 + MGP_WSBEiJ_P0050583 Tnks2 protein_coding protein_coding MGP_WSBEiJ_T0050584.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35363314 35385821 + Tnks2 protein_coding processed_transcript MGP_WSBEiJ_T0050585.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35378444 35384896 + Tnks2 protein_coding retained_intron MGP_WSBEiJ_T0050586.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35387377 35392200 + Tnks2 protein_coding retained_intron MGP_WSBEiJ_T0050587.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35387760 35402800 + MGP_WSBEiJ_P0050587 Tnks2 protein_coding protein_coding MGP_WSBEiJ_T0050588.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35388973 35396104 + MGP_WSBEiJ_P0050588 Tnks2 protein_coding protein_coding MGP_WSBEiJ_T0050589.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35402087 35414400 + MGP_WSBEiJ_P0050589 Tnks2 protein_coding protein_coding MGP_WSBEiJ_T0050590.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35408829 35413396 + Tnks2 protein_coding retained_intron MGP_WSBEiJ_T0050591.1 MGP_WSBEiJ_G0024341.1 mouse_genomes_project 19 35410887 35417695 + Tnks2 protein_coding retained_intron MGP_WSBEiJ_T0050362.1 MGP_WSBEiJ_G0024266.1 mouse_genomes_project 19 22537788 22712620 - MGP_WSBEiJ_P0050362 Pgm5 protein_coding protein_coding MGP_WSBEiJ_T0050363.1 MGP_WSBEiJ_G0024266.1 mouse_genomes_project 19 22539322 22618191 - Pgm5 protein_coding processed_transcript MGP_WSBEiJ_T0050364.1 MGP_WSBEiJ_G0024266.1 mouse_genomes_project 19 22673178 22712452 - Pgm5 protein_coding retained_intron MGP_WSBEiJ_T0050365.1 MGP_WSBEiJ_G0024266.1 mouse_genomes_project 19 22673283 22712417 - Pgm5 protein_coding retained_intron MGP_WSBEiJ_T0006995.1 MGP_WSBEiJ_G0005746.1 mouse_genomes_project 19 44325240 44325776 + Gm29594 lincRNA lincRNA MGP_WSBEiJ_T0006996.1 MGP_WSBEiJ_G0005747.1 mouse_genomes_project 19 44337070 44345791 - Gm28578 lincRNA lincRNA MGP_WSBEiJ_T0006997.1 MGP_WSBEiJ_G0005747.1 mouse_genomes_project 19 44337090 44337836 - Gm28578 lincRNA lincRNA MGP_WSBEiJ_T0006998.1 MGP_WSBEiJ_G0005747.1 mouse_genomes_project 19 44342939 44345777 - Gm28578 lincRNA lincRNA MGP_WSBEiJ_T0099310.1 MGP_WSBEiJ_G0037973.1 mouse_genomes_project 19 16853811 16853943 + Gm25437 snoRNA snoRNA MGP_WSBEiJ_T0007000.1 MGP_WSBEiJ_G0005749.1 mouse_genomes_project 19 49983130 50094539 + Gm26629 lincRNA lincRNA MGP_WSBEiJ_T0050631.1 MGP_WSBEiJ_G0024357.1 mouse_genomes_project 19 36794800 36835405 - MGP_WSBEiJ_P0050631 Fra10ac1 protein_coding protein_coding MGP_WSBEiJ_T0049523.1 MGP_WSBEiJ_G0023969.1 mouse_genomes_project 19 2280311 2285046 + MGP_WSBEiJ_P0049523 Eif1ad protein_coding protein_coding MGP_WSBEiJ_T0050570.1 MGP_WSBEiJ_G0024338.1 mouse_genomes_project 19 34848135 34966441 + MGP_WSBEiJ_P0050570 Pcgf5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050571.1 MGP_WSBEiJ_G0024338.1 mouse_genomes_project 19 34878837 34961659 + MGP_WSBEiJ_P0050571 Pcgf5 protein_coding protein_coding MGP_WSBEiJ_T0050572.1 MGP_WSBEiJ_G0024338.1 mouse_genomes_project 19 34914460 34961659 + MGP_WSBEiJ_P0050572 Pcgf5 protein_coding protein_coding MGP_WSBEiJ_T0050568.1 MGP_WSBEiJ_G0024336.1 mouse_genomes_project 19 34562430 34583475 + MGP_WSBEiJ_P0050568 Rpp30 protein_coding protein_coding MGP_WSBEiJ_T0050836.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42947106 42983601 - MGP_WSBEiJ_P0050836 Erlin1 protein_coding protein_coding MGP_WSBEiJ_T0050837.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42947106 42983850 - MGP_WSBEiJ_P0050837 Erlin1 protein_coding protein_coding MGP_WSBEiJ_T0050838.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42947106 42983860 - MGP_WSBEiJ_P0050838 Erlin1 protein_coding protein_coding MGP_WSBEiJ_T0050839.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42968554 42983831 - MGP_WSBEiJ_P0050839 Erlin1 protein_coding protein_coding MGP_WSBEiJ_T0050840.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42972922 42983470 - MGP_WSBEiJ_P0050840 Erlin1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050841.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42972924 42981763 - MGP_WSBEiJ_P0050841 Erlin1 protein_coding protein_coding MGP_WSBEiJ_T0050842.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42980142 42983819 - Erlin1 protein_coding retained_intron MGP_WSBEiJ_T0050843.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42981552 42983771 - Erlin1 protein_coding retained_intron MGP_WSBEiJ_T0050844.1 MGP_WSBEiJ_G0024428.1 mouse_genomes_project 19 42983390 42983765 - MGP_WSBEiJ_P0050844 Erlin1 protein_coding protein_coding MGP_WSBEiJ_T0050230.1 MGP_WSBEiJ_G0024191.1 mouse_genomes_project 19 9952970 9989827 + MGP_WSBEiJ_P0050230 Lpxn protein_coding protein_coding MGP_WSBEiJ_T0013052.1 MGP_WSBEiJ_G0011182.1 mouse_genomes_project 19 39376523 39377281 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050505.1 MGP_WSBEiJ_G0024306.1 mouse_genomes_project 19 30057081 30135769 + MGP_WSBEiJ_P0050505 A1cf protein_coding protein_coding MGP_WSBEiJ_T0051232.1 MGP_WSBEiJ_G0024552.1 mouse_genomes_project 19 58937995 58952649 + MGP_WSBEiJ_P0051232 Kcnk18 protein_coding protein_coding MGP_WSBEiJ_T0050785.1 MGP_WSBEiJ_G0024412.1 mouse_genomes_project 19 41345542 41416445 + MGP_WSBEiJ_P0050785 R3hcc1l protein_coding protein_coding MGP_WSBEiJ_T0050786.1 MGP_WSBEiJ_G0024412.1 mouse_genomes_project 19 41345581 41414416 + MGP_WSBEiJ_P0050786 R3hcc1l protein_coding protein_coding MGP_WSBEiJ_T0050787.1 MGP_WSBEiJ_G0024412.1 mouse_genomes_project 19 41345605 41398930 + MGP_WSBEiJ_P0050787 R3hcc1l protein_coding protein_coding MGP_WSBEiJ_T0050788.1 MGP_WSBEiJ_G0024412.1 mouse_genomes_project 19 41387293 41399499 + R3hcc1l protein_coding retained_intron MGP_WSBEiJ_T0050789.1 MGP_WSBEiJ_G0024412.1 mouse_genomes_project 19 41404560 41408156 + R3hcc1l protein_coding retained_intron MGP_WSBEiJ_T0097015.1 MGP_WSBEiJ_G0035696.1 mouse_genomes_project 19 35724593 35724699 + Gm23918 rRNA rRNA MGP_WSBEiJ_T0049609.1 MGP_WSBEiJ_G0023998.1 mouse_genomes_project 19 2827854 2835799 + MGP_WSBEiJ_P0049609 Slc25a45 protein_coding protein_coding MGP_WSBEiJ_T0049610.1 MGP_WSBEiJ_G0023998.1 mouse_genomes_project 19 2828664 2830633 + MGP_WSBEiJ_P0049610 Slc25a45 protein_coding protein_coding MGP_WSBEiJ_T0049611.1 MGP_WSBEiJ_G0023998.1 mouse_genomes_project 19 2828691 2835805 + MGP_WSBEiJ_P0049611 Slc25a45 protein_coding protein_coding MGP_WSBEiJ_T0049612.1 MGP_WSBEiJ_G0023998.1 mouse_genomes_project 19 2828692 2834518 + MGP_WSBEiJ_P0049612 Slc25a45 protein_coding protein_coding MGP_WSBEiJ_T0050939.1 MGP_WSBEiJ_G0024463.1 mouse_genomes_project 19 45099903 45115910 - MGP_WSBEiJ_P0050939 Ldb1 protein_coding protein_coding MGP_WSBEiJ_T0050940.1 MGP_WSBEiJ_G0024463.1 mouse_genomes_project 19 45099904 45109310 - MGP_WSBEiJ_P0050940 Ldb1 protein_coding protein_coding MGP_WSBEiJ_T0050941.1 MGP_WSBEiJ_G0024463.1 mouse_genomes_project 19 45099909 45115907 - MGP_WSBEiJ_P0050941 Ldb1 protein_coding protein_coding MGP_WSBEiJ_T0050942.1 MGP_WSBEiJ_G0024463.1 mouse_genomes_project 19 45099982 45115906 - MGP_WSBEiJ_P0050942 Ldb1 protein_coding protein_coding MGP_WSBEiJ_T0050943.1 MGP_WSBEiJ_G0024463.1 mouse_genomes_project 19 45099982 45115610 - MGP_WSBEiJ_P0050943 Ldb1 protein_coding protein_coding MGP_WSBEiJ_T0050944.1 MGP_WSBEiJ_G0024463.1 mouse_genomes_project 19 45101038 45102172 - Ldb1 protein_coding retained_intron MGP_WSBEiJ_T0050945.1 MGP_WSBEiJ_G0024463.1 mouse_genomes_project 19 45101262 45115550 - MGP_WSBEiJ_P0050945 Ldb1 protein_coding protein_coding MGP_WSBEiJ_T0050946.1 MGP_WSBEiJ_G0024463.1 mouse_genomes_project 19 45101344 45103303 - Ldb1 protein_coding retained_intron MGP_WSBEiJ_T0050918.1 MGP_WSBEiJ_G0024457.1 mouse_genomes_project 19 44769830 44775920 - MGP_WSBEiJ_P0050918 Fgf8 protein_coding protein_coding MGP_WSBEiJ_T0050919.1 MGP_WSBEiJ_G0024457.1 mouse_genomes_project 19 44769845 44775961 - MGP_WSBEiJ_P0050919 Fgf8 protein_coding protein_coding MGP_WSBEiJ_T0050920.1 MGP_WSBEiJ_G0024457.1 mouse_genomes_project 19 44769850 44775919 - MGP_WSBEiJ_P0050920 Fgf8 protein_coding protein_coding MGP_WSBEiJ_T0050921.1 MGP_WSBEiJ_G0024457.1 mouse_genomes_project 19 44769967 44775904 - MGP_WSBEiJ_P0050921 Fgf8 protein_coding protein_coding MGP_WSBEiJ_T0050922.1 MGP_WSBEiJ_G0024457.1 mouse_genomes_project 19 44770002 44775720 - MGP_WSBEiJ_P0050922 Fgf8 protein_coding protein_coding MGP_WSBEiJ_T0050923.1 MGP_WSBEiJ_G0024457.1 mouse_genomes_project 19 44770021 44775720 - MGP_WSBEiJ_P0050923 Fgf8 protein_coding protein_coding MGP_WSBEiJ_T0050251.1 MGP_WSBEiJ_G0024212.1 mouse_genomes_project 19 10637567 10638512 - MGP_WSBEiJ_P0050251 Olfr1472 protein_coding protein_coding MGP_WSBEiJ_T0049292.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 632569 674599 + MGP_WSBEiJ_P0049292 Chka protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049293.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 632593 674603 + MGP_WSBEiJ_P0049293 Chka protein_coding protein_coding MGP_WSBEiJ_T0049294.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 632606 652011 + Chka protein_coding retained_intron MGP_WSBEiJ_T0049295.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 632606 674601 + Chka protein_coding retained_intron MGP_WSBEiJ_T0049296.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 632628 647992 + Chka protein_coding retained_intron MGP_WSBEiJ_T0049297.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 632628 658727 + Chka protein_coding retained_intron MGP_WSBEiJ_T0049298.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 632872 674598 + MGP_WSBEiJ_P0049298 Chka protein_coding protein_coding MGP_WSBEiJ_T0049299.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 632897 666098 + MGP_WSBEiJ_P0049299 Chka protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049300.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 633159 667684 + MGP_WSBEiJ_P0049300 Chka protein_coding protein_coding MGP_WSBEiJ_T0049301.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 654776 670167 + MGP_WSBEiJ_P0049301 Chka protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049302.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 655477 664819 + Chka protein_coding processed_transcript MGP_WSBEiJ_T0049303.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 655491 664772 + Chka protein_coding retained_intron MGP_WSBEiJ_T0049304.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 655517 666650 + Chka protein_coding processed_transcript MGP_WSBEiJ_T0049305.1 MGP_WSBEiJ_G0023899.1 mouse_genomes_project 19 671963 673890 + Chka protein_coding retained_intron MGP_WSBEiJ_T0050120.1 MGP_WSBEiJ_G0024139.1 mouse_genomes_project 19 8181071 8210554 - MGP_WSBEiJ_P0050120 1700025F22Rik protein_coding protein_coding MGP_WSBEiJ_T0050121.1 MGP_WSBEiJ_G0024139.1 mouse_genomes_project 19 8181071 8204456 - MGP_WSBEiJ_P0050121 1700025F22Rik protein_coding protein_coding MGP_WSBEiJ_T0050122.1 MGP_WSBEiJ_G0024139.1 mouse_genomes_project 19 8181071 8210540 - MGP_WSBEiJ_P0050122 1700025F22Rik protein_coding protein_coding MGP_WSBEiJ_T0050123.1 MGP_WSBEiJ_G0024139.1 mouse_genomes_project 19 8181071 8210540 - MGP_WSBEiJ_P0050123 1700025F22Rik protein_coding protein_coding MGP_WSBEiJ_T0050295.1 MGP_WSBEiJ_G0024237.1 mouse_genomes_project 19 16182468 16186864 + Nmrk1 protein_coding retained_intron MGP_WSBEiJ_T0050296.1 MGP_WSBEiJ_G0024237.1 mouse_genomes_project 19 16182468 16202909 + MGP_WSBEiJ_P0050296 Nmrk1 protein_coding protein_coding MGP_WSBEiJ_T0050297.1 MGP_WSBEiJ_G0024237.1 mouse_genomes_project 19 16182468 16202642 + MGP_WSBEiJ_P0050297 Nmrk1 protein_coding protein_coding MGP_WSBEiJ_T0050298.1 MGP_WSBEiJ_G0024237.1 mouse_genomes_project 19 16182477 16191702 + MGP_WSBEiJ_P0050298 Nmrk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050299.1 MGP_WSBEiJ_G0024237.1 mouse_genomes_project 19 16182480 16187778 + Nmrk1 protein_coding retained_intron MGP_WSBEiJ_T0050883.1 MGP_WSBEiJ_G0024444.1 mouse_genomes_project 19 43964560 43981644 + MGP_WSBEiJ_P0050883 Sema4g protein_coding protein_coding MGP_WSBEiJ_T0050884.1 MGP_WSBEiJ_G0024444.1 mouse_genomes_project 19 43964750 43981644 + MGP_WSBEiJ_P0050884 Sema4g protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050885.1 MGP_WSBEiJ_G0024444.1 mouse_genomes_project 19 43966251 43981580 + MGP_WSBEiJ_P0050885 Sema4g protein_coding unknown_likely_coding MGP_WSBEiJ_T0050886.1 MGP_WSBEiJ_G0024444.1 mouse_genomes_project 19 43967583 43981641 + MGP_WSBEiJ_P0050886 Sema4g protein_coding protein_coding MGP_WSBEiJ_T0050999.1 MGP_WSBEiJ_G0024476.1 mouse_genomes_project 19 45607277 45623337 + MGP_WSBEiJ_P0050999 Trim8 protein_coding protein_coding MGP_WSBEiJ_T0050249.1 MGP_WSBEiJ_G0024210.1 mouse_genomes_project 19 10589280 10590210 + MGP_WSBEiJ_P0050249 Olfr1469 protein_coding protein_coding MGP_WSBEiJ_T0013037.1 MGP_WSBEiJ_G0011167.1 mouse_genomes_project 19 8737729 8738522 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050663.1 MGP_WSBEiJ_G0024371.1 mouse_genomes_project 19 38281887 38324794 - MGP_WSBEiJ_P0050663 protein_coding protein_coding MGP_WSBEiJ_T0049539.1 MGP_WSBEiJ_G0023977.1 mouse_genomes_project 19 2386532 2389791 - MGP_WSBEiJ_P0049539 Ctsw protein_coding protein_coding MGP_WSBEiJ_T0050195.1 MGP_WSBEiJ_G0024171.1 mouse_genomes_project 19 9200562 9201507 - MGP_WSBEiJ_P0050195 Olfr1428 protein_coding protein_coding MGP_WSBEiJ_T0010121.1 MGP_WSBEiJ_G0008278.1 mouse_genomes_project 19 3262049 3262135 + Mir194-2 miRNA miRNA MGP_WSBEiJ_T0049817.1 MGP_WSBEiJ_G0024038.1 mouse_genomes_project 19 3823022 3835432 - MGP_WSBEiJ_P0049817 Esrra protein_coding protein_coding MGP_WSBEiJ_T0049818.1 MGP_WSBEiJ_G0024038.1 mouse_genomes_project 19 3824497 3835385 - MGP_WSBEiJ_P0049818 Esrra protein_coding protein_coding MGP_WSBEiJ_T0049819.1 MGP_WSBEiJ_G0024038.1 mouse_genomes_project 19 3824810 3835437 - Esrra protein_coding processed_transcript MGP_WSBEiJ_T0049820.1 MGP_WSBEiJ_G0024038.1 mouse_genomes_project 19 3833526 3835391 - Esrra protein_coding retained_intron MGP_WSBEiJ_T0049821.1 MGP_WSBEiJ_G0024038.1 mouse_genomes_project 19 3833701 3834675 - MGP_WSBEiJ_P0049821 Esrra protein_coding protein_coding MGP_WSBEiJ_T0049574.1 MGP_WSBEiJ_G0023987.1 mouse_genomes_project 19 2573515 2584164 + MGP_WSBEiJ_P0049574 Rela protein_coding protein_coding MGP_WSBEiJ_T0050854.1 MGP_WSBEiJ_G0024431.1 mouse_genomes_project 19 43054030 43060998 - MGP_WSBEiJ_P0050854 Bloc1s2 protein_coding protein_coding MGP_WSBEiJ_T0003781.1 MGP_WSBEiJ_G0003387.1 mouse_genomes_project 19 8247421 8348426 + 4930526L06Rik antisense antisense MGP_WSBEiJ_T0010155.1 MGP_WSBEiJ_G0008312.1 mouse_genomes_project 19 47125025 47125107 - Gm22240 miRNA miRNA MGP_WSBEiJ_T0013047.1 MGP_WSBEiJ_G0011177.1 mouse_genomes_project 19 26776452 26776845 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049355.1 MGP_WSBEiJ_G0023913.1 mouse_genomes_project 19 905281 906900 + Cdk2ap2 protein_coding retained_intron MGP_WSBEiJ_T0049356.1 MGP_WSBEiJ_G0023913.1 mouse_genomes_project 19 905281 906346 + MGP_WSBEiJ_P0049356 Cdk2ap2 protein_coding protein_coding MGP_WSBEiJ_T0049357.1 MGP_WSBEiJ_G0023913.1 mouse_genomes_project 19 905282 906891 + MGP_WSBEiJ_P0049357 Cdk2ap2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049358.1 MGP_WSBEiJ_G0023913.1 mouse_genomes_project 19 905306 906898 + MGP_WSBEiJ_P0049358 Cdk2ap2 protein_coding protein_coding MGP_WSBEiJ_T0099298.1 MGP_WSBEiJ_G0037961.1 mouse_genomes_project 19 5771115 5771187 + Gm25855 snoRNA snoRNA MGP_WSBEiJ_T0050527.1 MGP_WSBEiJ_G0024313.1 mouse_genomes_project 19 31381980 31643014 - MGP_WSBEiJ_P0050527 Rnls protein_coding protein_coding MGP_WSBEiJ_T0098077.1 MGP_WSBEiJ_G0036740.1 mouse_genomes_project 19 43911069 43911176 + Gm25482 snRNA snRNA MGP_WSBEiJ_T0050348.1 MGP_WSBEiJ_G0024256.1 mouse_genomes_project 19 21340321 21440268 - MGP_WSBEiJ_P0050348 1700028P14Rik protein_coding protein_coding MGP_WSBEiJ_T0049972.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5895126 5906273 + MGP_WSBEiJ_P0049972 Bscl2 protein_coding protein_coding MGP_WSBEiJ_T0049973.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5895346 5897908 + Bscl2 protein_coding processed_transcript MGP_WSBEiJ_T0049974.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5895388 5906257 + MGP_WSBEiJ_P0049974 Bscl2 protein_coding protein_coding MGP_WSBEiJ_T0049975.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5896992 5906256 + MGP_WSBEiJ_P0049975 Bscl2 protein_coding protein_coding MGP_WSBEiJ_T0049976.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5897037 5906257 + Bscl2 protein_coding retained_intron MGP_WSBEiJ_T0049977.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5897054 5906228 + MGP_WSBEiJ_P0049977 Bscl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049978.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5898183 5906256 + MGP_WSBEiJ_P0049978 Bscl2 protein_coding protein_coding MGP_WSBEiJ_T0049979.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5898199 5906256 + Bscl2 protein_coding retained_intron MGP_WSBEiJ_T0049980.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5898199 5906256 + Bscl2 protein_coding retained_intron MGP_WSBEiJ_T0049981.1 MGP_WSBEiJ_G0024083.1 mouse_genomes_project 19 5903855 5906213 + MGP_WSBEiJ_P0049981 Bscl2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050369.1 MGP_WSBEiJ_G0024270.1 mouse_genomes_project 19 23117785 23326868 + MGP_WSBEiJ_P0050369 Kank1 protein_coding protein_coding MGP_WSBEiJ_T0050370.1 MGP_WSBEiJ_G0024270.1 mouse_genomes_project 19 23285645 23300492 + Kank1 protein_coding processed_transcript MGP_WSBEiJ_T0050371.1 MGP_WSBEiJ_G0024270.1 mouse_genomes_project 19 23297190 23318416 + MGP_WSBEiJ_P0050371 Kank1 protein_coding protein_coding MGP_WSBEiJ_T0050372.1 MGP_WSBEiJ_G0024270.1 mouse_genomes_project 19 23314736 23317008 + Kank1 protein_coding retained_intron MGP_WSBEiJ_T0051238.1 MGP_WSBEiJ_G0024556.1 mouse_genomes_project 19 59634857 59678266 - MGP_WSBEiJ_P0051238 Rab11fip2 protein_coding protein_coding MGP_WSBEiJ_T0051239.1 MGP_WSBEiJ_G0024556.1 mouse_genomes_project 19 59635671 59677977 - MGP_WSBEiJ_P0051239 Rab11fip2 protein_coding protein_coding MGP_WSBEiJ_T0051240.1 MGP_WSBEiJ_G0024556.1 mouse_genomes_project 19 59638891 59677613 - MGP_WSBEiJ_P0051240 Rab11fip2 protein_coding protein_coding MGP_WSBEiJ_T0051165.1 MGP_WSBEiJ_G0024533.1 mouse_genomes_project 19 56329182 56333219 + MGP_WSBEiJ_P0051165 Adrb1 protein_coding protein_coding MGP_WSBEiJ_T0099313.1 MGP_WSBEiJ_G0037976.1 mouse_genomes_project 19 21429530 21429632 + Gm22144 snoRNA snoRNA MGP_WSBEiJ_T0050738.1 MGP_WSBEiJ_G0024397.1 mouse_genomes_project 19 40725367 40735488 - MGP_WSBEiJ_P0050738 Exosc1 protein_coding protein_coding MGP_WSBEiJ_T0050739.1 MGP_WSBEiJ_G0024397.1 mouse_genomes_project 19 40725367 40735488 - MGP_WSBEiJ_P0050739 Exosc1 protein_coding protein_coding MGP_WSBEiJ_T0050188.1 MGP_WSBEiJ_G0024164.1 mouse_genomes_project 19 8968234 9005638 + MGP_WSBEiJ_P0050188 Patl1 protein_coding protein_coding MGP_WSBEiJ_T0051024.1 MGP_WSBEiJ_G0024490.1 mouse_genomes_project 19 46261532 46298013 - MGP_WSBEiJ_P0051024 Calhm2 protein_coding protein_coding MGP_WSBEiJ_T0051025.1 MGP_WSBEiJ_G0024490.1 mouse_genomes_project 19 46291558 46298013 - MGP_WSBEiJ_P0051025 Calhm2 protein_coding protein_coding MGP_WSBEiJ_T0050409.1 MGP_WSBEiJ_G0024279.1 mouse_genomes_project 19 25753601 25929155 - MGP_WSBEiJ_P0050409 Rfx3 protein_coding protein_coding MGP_WSBEiJ_T0050410.1 MGP_WSBEiJ_G0024279.1 mouse_genomes_project 19 25757902 25828997 - Rfx3 protein_coding processed_transcript MGP_WSBEiJ_T0050411.1 MGP_WSBEiJ_G0024279.1 mouse_genomes_project 19 25758217 25903099 - MGP_WSBEiJ_P0050411 Rfx3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050412.1 MGP_WSBEiJ_G0024279.1 mouse_genomes_project 19 25794882 26023062 - Rfx3 protein_coding retained_intron MGP_WSBEiJ_T0050413.1 MGP_WSBEiJ_G0024279.1 mouse_genomes_project 19 25865243 26022736 - MGP_WSBEiJ_P0050413 Rfx3 protein_coding protein_coding MGP_WSBEiJ_T0051011.1 MGP_WSBEiJ_G0024481.1 mouse_genomes_project 19 45815438 45831799 + MGP_WSBEiJ_P0051011 Borcs7 protein_coding protein_coding MGP_WSBEiJ_T0003773.1 MGP_WSBEiJ_G0003382.1 mouse_genomes_project 19 3357657 3365680 - Gm14966 antisense antisense MGP_WSBEiJ_T0003774.1 MGP_WSBEiJ_G0003382.1 mouse_genomes_project 19 3357733 3365904 - Gm14966 antisense antisense MGP_WSBEiJ_T0050212.1 MGP_WSBEiJ_G0024185.1 mouse_genomes_project 19 9777173 9796831 + MGP_WSBEiJ_P0050212 Glyat protein_coding protein_coding MGP_WSBEiJ_T0050213.1 MGP_WSBEiJ_G0024185.1 mouse_genomes_project 19 9777380 9792092 + Glyat protein_coding retained_intron MGP_WSBEiJ_T0050214.1 MGP_WSBEiJ_G0024185.1 mouse_genomes_project 19 9777380 9778967 + Glyat protein_coding processed_transcript MGP_WSBEiJ_T0050215.1 MGP_WSBEiJ_G0024185.1 mouse_genomes_project 19 9777398 9797493 + MGP_WSBEiJ_P0050215 Glyat protein_coding protein_coding MGP_WSBEiJ_T0050216.1 MGP_WSBEiJ_G0024185.1 mouse_genomes_project 19 9783301 9794006 + Glyat protein_coding processed_transcript MGP_WSBEiJ_T0050352.1 MGP_WSBEiJ_G0024260.1 mouse_genomes_project 19 21771571 21833950 - MGP_WSBEiJ_P0050352 Fam189a2 protein_coding protein_coding MGP_WSBEiJ_T0050095.1 MGP_WSBEiJ_G0024130.1 mouse_genomes_project 19 7925989 7936293 + MGP_WSBEiJ_P0050095 Prpf19 protein_coding protein_coding MGP_WSBEiJ_T0050096.1 MGP_WSBEiJ_G0024130.1 mouse_genomes_project 19 7926035 7928672 + Prpf19 protein_coding retained_intron MGP_WSBEiJ_T0050097.1 MGP_WSBEiJ_G0024130.1 mouse_genomes_project 19 7926040 7929021 + Prpf19 protein_coding retained_intron MGP_WSBEiJ_T0050098.1 MGP_WSBEiJ_G0024130.1 mouse_genomes_project 19 7926131 7930128 + Prpf19 protein_coding retained_intron MGP_WSBEiJ_T0050099.1 MGP_WSBEiJ_G0024130.1 mouse_genomes_project 19 7926172 7940311 + MGP_WSBEiJ_P0050099 Prpf19 protein_coding protein_coding MGP_WSBEiJ_T0050100.1 MGP_WSBEiJ_G0024130.1 mouse_genomes_project 19 7929405 7936267 + Prpf19 protein_coding processed_transcript MGP_WSBEiJ_T0050101.1 MGP_WSBEiJ_G0024130.1 mouse_genomes_project 19 7930129 7933521 + Prpf19 protein_coding retained_intron MGP_WSBEiJ_T0050102.1 MGP_WSBEiJ_G0024130.1 mouse_genomes_project 19 7931042 7931754 + Prpf19 protein_coding retained_intron MGP_WSBEiJ_T0049333.1 MGP_WSBEiJ_G0023908.1 mouse_genomes_project 19 797930 801588 + Doc2g protein_coding retained_intron MGP_WSBEiJ_T0049334.1 MGP_WSBEiJ_G0023908.1 mouse_genomes_project 19 797934 800398 + Doc2g protein_coding retained_intron MGP_WSBEiJ_T0049335.1 MGP_WSBEiJ_G0023908.1 mouse_genomes_project 19 797945 801589 + MGP_WSBEiJ_P0049335 Doc2g protein_coding protein_coding MGP_WSBEiJ_T0049336.1 MGP_WSBEiJ_G0023908.1 mouse_genomes_project 19 798309 800717 + Doc2g protein_coding retained_intron MGP_WSBEiJ_T0050255.1 MGP_WSBEiJ_G0024216.1 mouse_genomes_project 19 10969492 10970452 + MGP_WSBEiJ_P0050255 Olfr1491 protein_coding protein_coding MGP_WSBEiJ_T0050456.1 MGP_WSBEiJ_G0024291.1 mouse_genomes_project 19 27445680 27470745 + MGP_WSBEiJ_P0050456 Cd274 protein_coding protein_coding MGP_WSBEiJ_T0097019.1 MGP_WSBEiJ_G0035700.1 mouse_genomes_project 19 50132354 50132391 + Gm25659 rRNA rRNA MGP_WSBEiJ_T0050726.1 MGP_WSBEiJ_G0024392.1 mouse_genomes_project 19 40384793 40532941 - MGP_WSBEiJ_P0050726 Slit1 protein_coding protein_coding MGP_WSBEiJ_T0050727.1 MGP_WSBEiJ_G0024392.1 mouse_genomes_project 19 40384795 40533114 - MGP_WSBEiJ_P0050727 Slit1 protein_coding protein_coding MGP_WSBEiJ_T0050728.1 MGP_WSBEiJ_G0024392.1 mouse_genomes_project 19 40384987 40532941 - MGP_WSBEiJ_P0050728 Slit1 protein_coding protein_coding MGP_WSBEiJ_T0050729.1 MGP_WSBEiJ_G0024392.1 mouse_genomes_project 19 40389429 40394528 - Slit1 protein_coding retained_intron MGP_WSBEiJ_T0050730.1 MGP_WSBEiJ_G0024392.1 mouse_genomes_project 19 40433139 40532935 - MGP_WSBEiJ_P0050730 Slit1 protein_coding protein_coding MGP_WSBEiJ_T0050016.1 MGP_WSBEiJ_G0024097.1 mouse_genomes_project 19 6060611 6152152 + MGP_WSBEiJ_P0050016 protein_coding protein_coding MGP_WSBEiJ_T0050182.1 MGP_WSBEiJ_G0024160.1 mouse_genomes_project 19 8806634 8811172 + MGP_WSBEiJ_P0050182 Mrpl16 protein_coding protein_coding MGP_WSBEiJ_T0050191.1 MGP_WSBEiJ_G0024167.1 mouse_genomes_project 19 9175275 9183901 - MGP_WSBEiJ_P0050191 Olfr1426 protein_coding protein_coding MGP_WSBEiJ_T0013034.1 MGP_WSBEiJ_G0011164.1 mouse_genomes_project 19 4680960 4682128 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013050.1 MGP_WSBEiJ_G0011180.1 mouse_genomes_project 19 28264991 28265369 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050305.1 MGP_WSBEiJ_G0024241.1 mouse_genomes_project 19 16503560 16576455 - MGP_WSBEiJ_P0050305 Rorb protein_coding protein_coding MGP_WSBEiJ_T0050306.1 MGP_WSBEiJ_G0024241.1 mouse_genomes_project 19 16511357 16692599 - MGP_WSBEiJ_P0050306 Rorb protein_coding protein_coding MGP_WSBEiJ_T0050307.1 MGP_WSBEiJ_G0024241.1 mouse_genomes_project 19 16550778 16576438 - Rorb protein_coding retained_intron MGP_WSBEiJ_T0050308.1 MGP_WSBEiJ_G0024241.1 mouse_genomes_project 19 16550796 16576449 - Rorb protein_coding retained_intron MGP_WSBEiJ_T0049990.1 MGP_WSBEiJ_G0024089.1 mouse_genomes_project 19 5954011 5960177 + MGP_WSBEiJ_P0049990 Ints5 protein_coding protein_coding MGP_WSBEiJ_T0049996.1 MGP_WSBEiJ_G0024089.1 mouse_genomes_project 19 5958187 5963088 + MGP_WSBEiJ_P0049996 Ints5 protein_coding protein_coding MGP_WSBEiJ_T0098065.1 MGP_WSBEiJ_G0036728.1 mouse_genomes_project 19 15389169 15389272 - Gm22880 snRNA snRNA MGP_WSBEiJ_T0050262.1 MGP_WSBEiJ_G0024223.1 mouse_genomes_project 19 11221517 11222602 - MGP_WSBEiJ_P0050262 protein_coding protein_coding MGP_WSBEiJ_T0050171.1 MGP_WSBEiJ_G0024155.1 mouse_genomes_project 19 8664135 8679016 - MGP_WSBEiJ_P0050171 Ms4a3 protein_coding protein_coding MGP_WSBEiJ_T0050172.1 MGP_WSBEiJ_G0024155.1 mouse_genomes_project 19 8664138 8679045 - MGP_WSBEiJ_P0050172 Ms4a3 protein_coding protein_coding MGP_WSBEiJ_T0050173.1 MGP_WSBEiJ_G0024155.1 mouse_genomes_project 19 8666538 8679062 - Ms4a3 protein_coding retained_intron MGP_WSBEiJ_T0050360.1 MGP_WSBEiJ_G0024264.1 mouse_genomes_project 19 22315482 22316337 - MGP_WSBEiJ_P0050360 Fam122a protein_coding protein_coding MGP_WSBEiJ_T0049966.1 MGP_WSBEiJ_G0024080.1 mouse_genomes_project 19 5865922 5876185 - MGP_WSBEiJ_P0049966 Ttc9c protein_coding protein_coding MGP_WSBEiJ_T0049967.1 MGP_WSBEiJ_G0024080.1 mouse_genomes_project 19 5867994 5875776 - MGP_WSBEiJ_P0049967 Ttc9c protein_coding protein_coding MGP_WSBEiJ_T0049968.1 MGP_WSBEiJ_G0024080.1 mouse_genomes_project 19 5868154 5876146 - MGP_WSBEiJ_P0049968 Ttc9c protein_coding protein_coding MGP_WSBEiJ_T0049969.1 MGP_WSBEiJ_G0024080.1 mouse_genomes_project 19 5875148 5876084 - Ttc9c protein_coding retained_intron MGP_WSBEiJ_T0049444.1 MGP_WSBEiJ_G0023933.1 mouse_genomes_project 19 1336077 1337871 - MGP_WSBEiJ_P0049444 2010003K11Rik protein_coding protein_coding MGP_WSBEiJ_T0099300.1 MGP_WSBEiJ_G0037963.1 mouse_genomes_project 19 5771653 5771725 + Gm24452 snoRNA snoRNA MGP_WSBEiJ_T0050528.1 MGP_WSBEiJ_G0024314.1 mouse_genomes_project 19 31641754 31644048 - protein_coding processed_transcript MGP_WSBEiJ_T0049484.1 MGP_WSBEiJ_G0023950.1 mouse_genomes_project 19 1798227 1822277 - MGP_WSBEiJ_P0049484 Peli3 protein_coding protein_coding MGP_WSBEiJ_T0049485.1 MGP_WSBEiJ_G0023950.1 mouse_genomes_project 19 1799431 1822312 - MGP_WSBEiJ_P0049485 Peli3 protein_coding protein_coding MGP_WSBEiJ_T0049486.1 MGP_WSBEiJ_G0023950.1 mouse_genomes_project 19 1814512 1818155 - Peli3 protein_coding retained_intron MGP_WSBEiJ_T0049487.1 MGP_WSBEiJ_G0023950.1 mouse_genomes_project 19 1814538 1822283 - Peli3 protein_coding processed_transcript MGP_WSBEiJ_T0049488.1 MGP_WSBEiJ_G0023950.1 mouse_genomes_project 19 1814542 1822258 - MGP_WSBEiJ_P0049488 Peli3 protein_coding protein_coding MGP_WSBEiJ_T0049489.1 MGP_WSBEiJ_G0023950.1 mouse_genomes_project 19 1814549 1822252 - Peli3 protein_coding processed_transcript MGP_WSBEiJ_T0049490.1 MGP_WSBEiJ_G0023950.1 mouse_genomes_project 19 1820784 1822231 - Peli3 protein_coding retained_intron MGP_WSBEiJ_T0050556.1 MGP_WSBEiJ_G0024331.1 mouse_genomes_project 19 33032482 33041700 + MGP_WSBEiJ_P0050556 Ifit1 protein_coding protein_coding MGP_WSBEiJ_T0051219.1 MGP_WSBEiJ_G0024544.1 mouse_genomes_project 19 58363975 58379325 + MGP_WSBEiJ_P0051219 Pnlip protein_coding protein_coding MGP_WSBEiJ_T0013053.1 MGP_WSBEiJ_G0011183.1 mouse_genomes_project 19 45797873 45798880 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0013039.1 MGP_WSBEiJ_G0011169.1 mouse_genomes_project 19 11342468 11343257 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050301.1 MGP_WSBEiJ_G0024239.1 mouse_genomes_project 19 16268470 16273697 + MGP_WSBEiJ_P0050301 D030056L22Rik protein_coding protein_coding MGP_WSBEiJ_T0050302.1 MGP_WSBEiJ_G0024239.1 mouse_genomes_project 19 16268513 16273697 + MGP_WSBEiJ_P0050302 D030056L22Rik protein_coding protein_coding MGP_WSBEiJ_T0011277.1 MGP_WSBEiJ_G0009434.1 mouse_genomes_project 19 16339116 16339332 - Gm24190 misc_RNA misc_RNA MGP_WSBEiJ_T0011282.1 MGP_WSBEiJ_G0009439.1 mouse_genomes_project 19 37103157 37103240 - Gm24930 misc_RNA misc_RNA MGP_WSBEiJ_T0049986.1 MGP_WSBEiJ_G0024087.1 mouse_genomes_project 19 5948847 5957828 + MGP_WSBEiJ_P0049986 Lbhd1 protein_coding protein_coding MGP_WSBEiJ_T0049987.1 MGP_WSBEiJ_G0024087.1 mouse_genomes_project 19 5949043 5952163 + Lbhd1 protein_coding retained_intron MGP_WSBEiJ_T0049988.1 MGP_WSBEiJ_G0024087.1 mouse_genomes_project 19 5949049 5952380 + MGP_WSBEiJ_P0049988 Lbhd1 protein_coding protein_coding MGP_WSBEiJ_T0049995.1 MGP_WSBEiJ_G0024087.1 mouse_genomes_project 19 5954398 5955859 + Lbhd1 protein_coding processed_transcript MGP_WSBEiJ_T0010148.1 MGP_WSBEiJ_G0008305.1 mouse_genomes_project 19 41106630 41106719 - Mir3085 miRNA miRNA MGP_WSBEiJ_T0050831.1 MGP_WSBEiJ_G0024425.1 mouse_genomes_project 19 42746169 42841440 - MGP_WSBEiJ_P0050831 Dnmbp protein_coding unknown_likely_coding MGP_WSBEiJ_T0050832.1 MGP_WSBEiJ_G0024425.1 mouse_genomes_project 19 42747323 42814008 - MGP_WSBEiJ_P0050832 Dnmbp protein_coding protein_coding MGP_WSBEiJ_T0003803.1 MGP_WSBEiJ_G0003404.1 mouse_genomes_project 19 57869249 57900812 + Gm16277 antisense antisense MGP_WSBEiJ_T0050260.1 MGP_WSBEiJ_G0024221.1 mouse_genomes_project 19 11084114 11085166 - MGP_WSBEiJ_P0050260 Olfr1499 protein_coding protein_coding MGP_WSBEiJ_T0100053.1 MGP_WSBEiJ_G0038673.1 mouse_genomes_project 19 10007785 10008528 + transcribed_processed_pseudogene processed_transcript MGP_WSBEiJ_T0100054.1 MGP_WSBEiJ_G0038673.1 mouse_genomes_project 19 10007969 10008308 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_WSBEiJ_T0050887.1 MGP_WSBEiJ_G0024445.1 mouse_genomes_project 19 43983322 43984751 - MGP_WSBEiJ_P0050887 Mrpl43 protein_coding protein_coding MGP_WSBEiJ_T0049472.1 MGP_WSBEiJ_G0023944.1 mouse_genomes_project 19 1695054 1698211 + MGP_WSBEiJ_P0049472 Ccdc87 protein_coding protein_coding MGP_WSBEiJ_T0050711.1 MGP_WSBEiJ_G0024382.1 mouse_genomes_project 19 39666193 39690041 + MGP_WSBEiJ_P0050711 Zfp518a protein_coding protein_coding MGP_WSBEiJ_T0049624.1 MGP_WSBEiJ_G0024002.1 mouse_genomes_project 19 2907245 2932631 - MGP_WSBEiJ_P0049624 Pola2 protein_coding protein_coding MGP_WSBEiJ_T0049625.1 MGP_WSBEiJ_G0024002.1 mouse_genomes_project 19 2907807 2932631 - MGP_WSBEiJ_P0049625 Pola2 protein_coding protein_coding MGP_WSBEiJ_T0050458.1 MGP_WSBEiJ_G0024293.1 mouse_genomes_project 19 27610982 27697124 + MGP_WSBEiJ_P0050458 Ric1 protein_coding protein_coding MGP_WSBEiJ_T0050459.1 MGP_WSBEiJ_G0024293.1 mouse_genomes_project 19 27611035 27652504 + MGP_WSBEiJ_P0050459 Ric1 protein_coding protein_coding MGP_WSBEiJ_T0050460.1 MGP_WSBEiJ_G0024293.1 mouse_genomes_project 19 27611082 27670761 + Ric1 protein_coding retained_intron MGP_WSBEiJ_T0050461.1 MGP_WSBEiJ_G0024293.1 mouse_genomes_project 19 27623075 27694514 + MGP_WSBEiJ_P0050461 Ric1 protein_coding protein_coding MGP_WSBEiJ_T0050462.1 MGP_WSBEiJ_G0024293.1 mouse_genomes_project 19 27685840 27695499 + MGP_WSBEiJ_P0050462 Ric1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050463.1 MGP_WSBEiJ_G0024293.1 mouse_genomes_project 19 27687573 27690210 + Ric1 protein_coding retained_intron MGP_WSBEiJ_T0050464.1 MGP_WSBEiJ_G0024293.1 mouse_genomes_project 19 27688158 27696210 + MGP_WSBEiJ_P0050464 Ric1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051234.1 MGP_WSBEiJ_G0024554.1 mouse_genomes_project 19 59012278 59061672 - MGP_WSBEiJ_P0051234 Pdzd8 protein_coding protein_coding MGP_WSBEiJ_T0049350.1 MGP_WSBEiJ_G0023912.1 mouse_genomes_project 19 885222 889322 + MGP_WSBEiJ_P0049350 Cabp2 protein_coding protein_coding MGP_WSBEiJ_T0049351.1 MGP_WSBEiJ_G0023912.1 mouse_genomes_project 19 886133 890982 + MGP_WSBEiJ_P0049351 Cabp2 protein_coding protein_coding MGP_WSBEiJ_T0049352.1 MGP_WSBEiJ_G0023912.1 mouse_genomes_project 19 887135 890986 + MGP_WSBEiJ_P0049352 Cabp2 protein_coding protein_coding MGP_WSBEiJ_T0049353.1 MGP_WSBEiJ_G0023912.1 mouse_genomes_project 19 887164 890986 + MGP_WSBEiJ_P0049353 Cabp2 protein_coding protein_coding MGP_WSBEiJ_T0049354.1 MGP_WSBEiJ_G0023912.1 mouse_genomes_project 19 890120 890983 + Cabp2 protein_coding processed_transcript MGP_WSBEiJ_T0051259.1 MGP_WSBEiJ_G0024565.1 mouse_genomes_project 19 60676280 60879216 + MGP_WSBEiJ_P0051259 Grk5 protein_coding protein_coding MGP_WSBEiJ_T0099296.1 MGP_WSBEiJ_G0037959.1 mouse_genomes_project 19 881991 882207 - Gm23927 snoRNA snoRNA MGP_WSBEiJ_T0051242.1 MGP_WSBEiJ_G0024558.1 mouse_genomes_project 19 60223889 60225455 - MGP_WSBEiJ_P0051242 Prlhr protein_coding protein_coding MGP_WSBEiJ_T0050273.1 MGP_WSBEiJ_G0024227.1 mouse_genomes_project 19 13338666 13367087 - MGP_WSBEiJ_P0050273 Cep78 protein_coding protein_coding MGP_WSBEiJ_T0010160.1 MGP_WSBEiJ_G0008317.1 mouse_genomes_project 19 57710501 57710571 + Mir5623 miRNA miRNA MGP_WSBEiJ_T0003770.1 MGP_WSBEiJ_G0003380.1 mouse_genomes_project 19 2664083 2668504 + Gm16538 antisense antisense MGP_WSBEiJ_T0050366.1 MGP_WSBEiJ_G0024267.1 mouse_genomes_project 19 22751928 22754273 - MGP_WSBEiJ_P0050366 Foxd4 protein_coding protein_coding MGP_WSBEiJ_T0010145.1 MGP_WSBEiJ_G0008302.1 mouse_genomes_project 19 39666191 39666278 + Mir8092 miRNA miRNA MGP_WSBEiJ_T0049630.1 MGP_WSBEiJ_G0024005.1 mouse_genomes_project 19 3028308 3035463 + MGP_WSBEiJ_P0049630 Syvn1 protein_coding protein_coding MGP_WSBEiJ_T0049631.1 MGP_WSBEiJ_G0024005.1 mouse_genomes_project 19 3028370 3030942 + MGP_WSBEiJ_P0049631 Syvn1 protein_coding protein_coding MGP_WSBEiJ_T0049632.1 MGP_WSBEiJ_G0024005.1 mouse_genomes_project 19 3028394 3035460 + MGP_WSBEiJ_P0049632 Syvn1 protein_coding protein_coding MGP_WSBEiJ_T0049633.1 MGP_WSBEiJ_G0024005.1 mouse_genomes_project 19 3028797 3035462 + Syvn1 protein_coding retained_intron MGP_WSBEiJ_T0049634.1 MGP_WSBEiJ_G0024005.1 mouse_genomes_project 19 3028812 3035460 + MGP_WSBEiJ_P0049634 Syvn1 protein_coding protein_coding MGP_WSBEiJ_T0049635.1 MGP_WSBEiJ_G0024005.1 mouse_genomes_project 19 3028817 3031390 + Syvn1 protein_coding retained_intron MGP_WSBEiJ_T0049636.1 MGP_WSBEiJ_G0024005.1 mouse_genomes_project 19 3028836 3035460 + MGP_WSBEiJ_P0049636 Syvn1 protein_coding protein_coding MGP_WSBEiJ_T0051154.1 MGP_WSBEiJ_G0024529.1 mouse_genomes_project 19 55992015 56038646 + MGP_WSBEiJ_P0051154 Casp7 protein_coding protein_coding MGP_WSBEiJ_T0049614.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2848352 2866128 - MGP_WSBEiJ_P0049614 Dpf2 protein_coding protein_coding MGP_WSBEiJ_T0049615.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2849223 2866049 - MGP_WSBEiJ_P0049615 Dpf2 protein_coding protein_coding MGP_WSBEiJ_T0049616.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2849223 2859737 - MGP_WSBEiJ_P0049616 Dpf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049617.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2850551 2856010 - Dpf2 protein_coding retained_intron MGP_WSBEiJ_T0049618.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2852001 2855119 - Dpf2 protein_coding retained_intron MGP_WSBEiJ_T0049619.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2856824 2866034 - Dpf2 protein_coding retained_intron MGP_WSBEiJ_T0049620.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2857803 2866026 - Dpf2 protein_coding retained_intron MGP_WSBEiJ_T0049621.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2858214 2866267 - Dpf2 protein_coding processed_transcript MGP_WSBEiJ_T0049622.1 MGP_WSBEiJ_G0024000.1 mouse_genomes_project 19 2865082 2866064 - Dpf2 protein_coding processed_transcript MGP_WSBEiJ_T0051243.1 MGP_WSBEiJ_G0024559.1 mouse_genomes_project 19 60287314 60351079 - MGP_WSBEiJ_P0051243 Cacul1 protein_coding protein_coding MGP_WSBEiJ_T0051244.1 MGP_WSBEiJ_G0024559.1 mouse_genomes_project 19 60287314 60351079 - MGP_WSBEiJ_P0051244 Cacul1 protein_coding protein_coding MGP_WSBEiJ_T0051245.1 MGP_WSBEiJ_G0024559.1 mouse_genomes_project 19 60287314 60351079 - MGP_WSBEiJ_P0051245 Cacul1 protein_coding protein_coding MGP_WSBEiJ_T0049855.1 MGP_WSBEiJ_G0024056.1 mouse_genomes_project 19 4170169 4189228 - MGP_WSBEiJ_P0049855 Naa40 protein_coding protein_coding MGP_WSBEiJ_T0010151.1 MGP_WSBEiJ_G0008308.1 mouse_genomes_project 19 43770046 43770170 + Mir6405 miRNA miRNA MGP_WSBEiJ_T0050198.1 MGP_WSBEiJ_G0024174.1 mouse_genomes_project 19 9390238 9392104 + MGP_WSBEiJ_P0050198 Olfr235 protein_coding protein_coding MGP_WSBEiJ_T0051241.1 MGP_WSBEiJ_G0024557.1 mouse_genomes_project 19 59951773 59981828 - MGP_WSBEiJ_P0051241 Fam204a protein_coding protein_coding MGP_WSBEiJ_T0050428.1 MGP_WSBEiJ_G0024282.1 mouse_genomes_project 19 26936004 26956749 - MGP_WSBEiJ_P0050428 4430402I18Rik protein_coding protein_coding MGP_WSBEiJ_T0050430.1 MGP_WSBEiJ_G0024282.1 mouse_genomes_project 19 26944061 27018252 - MGP_WSBEiJ_P0050430 4430402I18Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050431.1 MGP_WSBEiJ_G0024282.1 mouse_genomes_project 19 26967973 27014679 - MGP_WSBEiJ_P0050431 4430402I18Rik protein_coding protein_coding MGP_WSBEiJ_T0050432.1 MGP_WSBEiJ_G0024282.1 mouse_genomes_project 19 26968439 27018322 - MGP_WSBEiJ_P0050432 4430402I18Rik protein_coding protein_coding MGP_WSBEiJ_T0050433.1 MGP_WSBEiJ_G0024282.1 mouse_genomes_project 19 26968442 26974145 - 4430402I18Rik protein_coding processed_transcript MGP_WSBEiJ_T0050434.1 MGP_WSBEiJ_G0024282.1 mouse_genomes_project 19 26968597 27014098 - MGP_WSBEiJ_P0050434 4430402I18Rik protein_coding protein_coding MGP_WSBEiJ_T0050435.1 MGP_WSBEiJ_G0024282.1 mouse_genomes_project 19 26968597 27014098 - MGP_WSBEiJ_P0050435 4430402I18Rik protein_coding protein_coding MGP_WSBEiJ_T0050436.1 MGP_WSBEiJ_G0024282.1 mouse_genomes_project 19 26997230 27014433 - MGP_WSBEiJ_P0050436 4430402I18Rik protein_coding protein_coding MGP_WSBEiJ_T0050059.1 MGP_WSBEiJ_G0024115.1 mouse_genomes_project 19 7499032 7524846 - MGP_WSBEiJ_P0050059 Sdhaf2 protein_coding protein_coding MGP_WSBEiJ_T0011273.1 MGP_WSBEiJ_G0009430.1 mouse_genomes_project 19 2790959 2791081 - Gm28006 misc_RNA misc_RNA MGP_WSBEiJ_T0007008.1 MGP_WSBEiJ_G0005754.1 mouse_genomes_project 19 56953726 56997611 - B230217O12Rik lincRNA lincRNA MGP_WSBEiJ_T0050350.1 MGP_WSBEiJ_G0024258.1 mouse_genomes_project 19 21518667 21520399 + MGP_WSBEiJ_P0050350 Gm9938 protein_coding protein_coding MGP_WSBEiJ_T0097304.1 MGP_WSBEiJ_G0035979.1 mouse_genomes_project 19 26609408 26612181 - 4933413C19Rik sense_intronic sense_intronic MGP_WSBEiJ_T0049792.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3423912 3542907 + MGP_WSBEiJ_P0049792 Nrxn2 protein_coding protein_coding MGP_WSBEiJ_T0049793.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3423919 3472527 + Nrxn2 protein_coding retained_intron MGP_WSBEiJ_T0049794.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3423919 3542906 + MGP_WSBEiJ_P0049794 Nrxn2 protein_coding protein_coding MGP_WSBEiJ_T0049795.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3423946 3541968 + MGP_WSBEiJ_P0049795 Nrxn2 protein_coding protein_coding MGP_WSBEiJ_T0049796.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3433107 3542907 + MGP_WSBEiJ_P0049796 Nrxn2 protein_coding protein_coding MGP_WSBEiJ_T0049797.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3433816 3478159 + MGP_WSBEiJ_P0049797 Nrxn2 protein_coding protein_coding MGP_WSBEiJ_T0049798.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3433937 3479118 + MGP_WSBEiJ_P0049798 Nrxn2 protein_coding protein_coding MGP_WSBEiJ_T0049799.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3451239 3479132 + Nrxn2 protein_coding processed_transcript MGP_WSBEiJ_T0049800.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3452077 3479230 + Nrxn2 protein_coding processed_transcript MGP_WSBEiJ_T0049801.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3460369 3488360 + Nrxn2 protein_coding retained_intron MGP_WSBEiJ_T0049802.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3478887 3488359 + Nrxn2 protein_coding retained_intron MGP_WSBEiJ_T0049803.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3504961 3518410 + Nrxn2 protein_coding processed_transcript MGP_WSBEiJ_T0049804.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3506770 3542907 + MGP_WSBEiJ_P0049804 Nrxn2 protein_coding protein_coding MGP_WSBEiJ_T0049805.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3506777 3553847 + MGP_WSBEiJ_P0049805 Nrxn2 protein_coding protein_coding MGP_WSBEiJ_T0049806.1 MGP_WSBEiJ_G0024032.1 mouse_genomes_project 19 3525780 3541986 + Nrxn2 protein_coding processed_transcript MGP_WSBEiJ_T0050805.1 MGP_WSBEiJ_G0024416.1 mouse_genomes_project 19 41625232 42256654 - MGP_WSBEiJ_P0050805 Hpse2 protein_coding protein_coding MGP_WSBEiJ_T0003765.1 MGP_WSBEiJ_G0003379.1 mouse_genomes_project 19 2323541 2331829 + 4930481A15Rik antisense antisense MGP_WSBEiJ_T0003766.1 MGP_WSBEiJ_G0003379.1 mouse_genomes_project 19 2323559 2338964 + 4930481A15Rik antisense antisense MGP_WSBEiJ_T0003767.1 MGP_WSBEiJ_G0003379.1 mouse_genomes_project 19 2323612 2339067 + 4930481A15Rik antisense antisense MGP_WSBEiJ_T0003768.1 MGP_WSBEiJ_G0003379.1 mouse_genomes_project 19 2323619 2338971 + 4930481A15Rik antisense antisense MGP_WSBEiJ_T0003769.1 MGP_WSBEiJ_G0003379.1 mouse_genomes_project 19 2323671 2344233 + 4930481A15Rik antisense antisense MGP_WSBEiJ_T0050965.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45229190 45367314 + MGP_WSBEiJ_P0050965 Gbf1 protein_coding protein_coding MGP_WSBEiJ_T0050966.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45229211 45336128 + Gbf1 protein_coding retained_intron MGP_WSBEiJ_T0050967.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45229229 45348320 + Gbf1 protein_coding retained_intron MGP_WSBEiJ_T0050968.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45229254 45325508 + Gbf1 protein_coding processed_transcript MGP_WSBEiJ_T0050969.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45325408 45367313 + MGP_WSBEiJ_P0050969 Gbf1 protein_coding protein_coding MGP_WSBEiJ_T0050970.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45334197 45339896 + MGP_WSBEiJ_P0050970 Gbf1 protein_coding protein_coding MGP_WSBEiJ_T0050972.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45348926 45350841 + Gbf1 protein_coding processed_transcript MGP_WSBEiJ_T0050973.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45349847 45353506 + Gbf1 protein_coding retained_intron MGP_WSBEiJ_T0050974.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45360675 45361812 + Gbf1 protein_coding retained_intron MGP_WSBEiJ_T0050975.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45360982 45364486 + MGP_WSBEiJ_P0050975 Gbf1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050976.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45361137 45364289 + Gbf1 protein_coding retained_intron MGP_WSBEiJ_T0050977.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45363646 45364830 + Gbf1 protein_coding processed_transcript MGP_WSBEiJ_T0050978.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45363804 45364744 + Gbf1 protein_coding retained_intron MGP_WSBEiJ_T0050979.1 MGP_WSBEiJ_G0024468.1 mouse_genomes_project 19 45365366 45366784 + Gbf1 protein_coding retained_intron MGP_WSBEiJ_T0049731.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343258 3357748 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049732.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343278 3344777 + MGP_WSBEiJ_P0049732 Map4k2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049733.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343283 3357751 + MGP_WSBEiJ_P0049733 Map4k2 protein_coding protein_coding MGP_WSBEiJ_T0049734.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343314 3344117 + Map4k2 protein_coding processed_transcript MGP_WSBEiJ_T0049735.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343331 3357437 + MGP_WSBEiJ_P0049735 Map4k2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049736.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343339 3344995 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049737.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343347 3347864 + MGP_WSBEiJ_P0049737 Map4k2 protein_coding protein_coding MGP_WSBEiJ_T0049738.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343373 3355663 + MGP_WSBEiJ_P0049738 Map4k2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049739.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343393 3345644 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049740.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343541 3345979 + Map4k2 protein_coding processed_transcript MGP_WSBEiJ_T0049741.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343572 3345642 + Map4k2 protein_coding processed_transcript MGP_WSBEiJ_T0049742.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343594 3345642 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049743.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3343899 3354021 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049744.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3344657 3344966 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049745.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3345636 3346769 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049746.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3347471 3348421 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049747.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3348676 3355976 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049748.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3348796 3353792 + Map4k2 protein_coding processed_transcript MGP_WSBEiJ_T0049749.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3348819 3355974 + MGP_WSBEiJ_P0049749 Map4k2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049750.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3353041 3353713 + Map4k2 protein_coding retained_intron MGP_WSBEiJ_T0049751.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3354755 3357578 + Map4k2 protein_coding processed_transcript MGP_WSBEiJ_T0049752.1 MGP_WSBEiJ_G0024028.1 mouse_genomes_project 19 3354910 3355769 + Map4k2 protein_coding processed_transcript MGP_WSBEiJ_T0003795.1 MGP_WSBEiJ_G0003396.1 mouse_genomes_project 19 43734642 43746376 - Gm20395 antisense antisense MGP_WSBEiJ_T0050551.1 MGP_WSBEiJ_G0024327.1 mouse_genomes_project 19 32973793 32986197 - MGP_WSBEiJ_P0050551 Ifit1bl1 protein_coding protein_coding MGP_WSBEiJ_T0050552.1 MGP_WSBEiJ_G0024327.1 mouse_genomes_project 19 32973796 32984100 - MGP_WSBEiJ_P0050552 Ifit1bl1 protein_coding protein_coding MGP_WSBEiJ_T0050892.1 MGP_WSBEiJ_G0024448.1 mouse_genomes_project 19 44007894 44010952 - Pdzd7 protein_coding processed_transcript MGP_WSBEiJ_T0050893.1 MGP_WSBEiJ_G0024448.1 mouse_genomes_project 19 44007895 44028963 - MGP_WSBEiJ_P0050893 Pdzd7 protein_coding protein_coding MGP_WSBEiJ_T0050894.1 MGP_WSBEiJ_G0024448.1 mouse_genomes_project 19 44007895 44028121 - MGP_WSBEiJ_P0050894 Pdzd7 protein_coding protein_coding MGP_WSBEiJ_T0097306.1 MGP_WSBEiJ_G0035981.1 mouse_genomes_project 19 55406319 55411524 + Ppnr sense_intronic sense_intronic MGP_WSBEiJ_T0050617.1 MGP_WSBEiJ_G0024350.1 mouse_genomes_project 19 36267473 36275285 + MGP_WSBEiJ_P0050617 Cyp26c1 protein_coding protein_coding MGP_WSBEiJ_T0049568.1 MGP_WSBEiJ_G0023985.1 mouse_genomes_project 19 2534542 2536109 + MGP_WSBEiJ_P0049568 Rnaseh2c protein_coding protein_coding MGP_WSBEiJ_T0049569.1 MGP_WSBEiJ_G0023985.1 mouse_genomes_project 19 2534556 2535537 + Rnaseh2c protein_coding retained_intron MGP_WSBEiJ_T0049570.1 MGP_WSBEiJ_G0023985.1 mouse_genomes_project 19 2534644 2535602 + Rnaseh2c protein_coding retained_intron MGP_WSBEiJ_T0049571.1 MGP_WSBEiJ_G0023985.1 mouse_genomes_project 19 2534904 2535608 + MGP_WSBEiJ_P0049571 Rnaseh2c protein_coding protein_coding MGP_WSBEiJ_T0049572.1 MGP_WSBEiJ_G0023985.1 mouse_genomes_project 19 2535079 2535604 + Rnaseh2c protein_coding retained_intron MGP_WSBEiJ_T0050959.1 MGP_WSBEiJ_G0024465.1 mouse_genomes_project 19 45147879 45157557 + MGP_WSBEiJ_P0050959 Nolc1 protein_coding protein_coding MGP_WSBEiJ_T0050960.1 MGP_WSBEiJ_G0024465.1 mouse_genomes_project 19 45148046 45157566 + MGP_WSBEiJ_P0050960 Nolc1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0049565.1 MGP_WSBEiJ_G0023982.1 mouse_genomes_project 19 2428050 2429071 - MGP_WSBEiJ_P0049565 1700020D05Rik protein_coding protein_coding MGP_WSBEiJ_T0050725.1 MGP_WSBEiJ_G0024391.1 mouse_genomes_project 19 40376703 40379482 + MGP_WSBEiJ_P0050725 AI606181 protein_coding protein_coding MGP_WSBEiJ_T0050625.1 MGP_WSBEiJ_G0024354.1 mouse_genomes_project 19 36694968 36715444 + MGP_WSBEiJ_P0050625 Ffar4 protein_coding protein_coding MGP_WSBEiJ_T0050010.1 MGP_WSBEiJ_G0024096.1 mouse_genomes_project 19 6038024 6049769 + MGP_WSBEiJ_P0050010 Eef1g protein_coding protein_coding MGP_WSBEiJ_T0050011.1 MGP_WSBEiJ_G0024096.1 mouse_genomes_project 19 6038553 6043491 + Eef1g protein_coding processed_transcript MGP_WSBEiJ_T0050012.1 MGP_WSBEiJ_G0024096.1 mouse_genomes_project 19 6039202 6043611 + Eef1g protein_coding processed_transcript MGP_WSBEiJ_T0050013.1 MGP_WSBEiJ_G0024096.1 mouse_genomes_project 19 6039202 6041184 + Eef1g protein_coding retained_intron MGP_WSBEiJ_T0050014.1 MGP_WSBEiJ_G0024096.1 mouse_genomes_project 19 6039202 6040489 + Eef1g protein_coding retained_intron MGP_WSBEiJ_T0050015.1 MGP_WSBEiJ_G0024096.1 mouse_genomes_project 19 6043378 6049769 + Eef1g protein_coding retained_intron MGP_WSBEiJ_T0098063.1 MGP_WSBEiJ_G0036726.1 mouse_genomes_project 19 12058084 12058207 - Gm26026 snRNA snRNA MGP_WSBEiJ_T0100680.1 MGP_WSBEiJ_G0039138.1 mouse_genomes_project 19 6597905 6604511 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0050718.1 MGP_WSBEiJ_G0024386.1 mouse_genomes_project 19 39870239 39993694 - MGP_WSBEiJ_P0050718 Tll2 protein_coding protein_coding MGP_WSBEiJ_T0050719.1 MGP_WSBEiJ_G0024386.1 mouse_genomes_project 19 39870239 39993694 - MGP_WSBEiJ_P0050719 Tll2 protein_coding protein_coding MGP_WSBEiJ_T0050808.1 MGP_WSBEiJ_G0024418.1 mouse_genomes_project 19 42378616 42403878 - MGP_WSBEiJ_P0050808 Got1 protein_coding protein_coding MGP_WSBEiJ_T0050809.1 MGP_WSBEiJ_G0024418.1 mouse_genomes_project 19 42378885 42395485 - MGP_WSBEiJ_P0050809 Got1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050810.1 MGP_WSBEiJ_G0024418.1 mouse_genomes_project 19 42379181 42384444 - Got1 protein_coding retained_intron MGP_WSBEiJ_T0050811.1 MGP_WSBEiJ_G0024418.1 mouse_genomes_project 19 42391882 42403758 - Got1 protein_coding processed_transcript MGP_WSBEiJ_T0099301.1 MGP_WSBEiJ_G0037964.1 mouse_genomes_project 19 5771990 5772066 + Gm24453 snoRNA snoRNA MGP_WSBEiJ_T0050855.1 MGP_WSBEiJ_G0024432.1 mouse_genomes_project 19 43062149 43100805 - MGP_WSBEiJ_P0050855 Pkd2l1 protein_coding protein_coding MGP_WSBEiJ_T0050856.1 MGP_WSBEiJ_G0024432.1 mouse_genomes_project 19 43062150 43100805 - Pkd2l1 protein_coding retained_intron MGP_WSBEiJ_T0050857.1 MGP_WSBEiJ_G0024432.1 mouse_genomes_project 19 43063019 43103580 - MGP_WSBEiJ_P0050857 Pkd2l1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050926.1 MGP_WSBEiJ_G0024459.1 mouse_genomes_project 19 44787484 44821863 - MGP_WSBEiJ_P0050926 Mgea5 protein_coding protein_coding MGP_WSBEiJ_T0050087.1 MGP_WSBEiJ_G0024129.1 mouse_genomes_project 19 7899562 7910994 - MGP_WSBEiJ_P0050087 Tmem109 protein_coding protein_coding MGP_WSBEiJ_T0050088.1 MGP_WSBEiJ_G0024129.1 mouse_genomes_project 19 7900746 7909275 - MGP_WSBEiJ_P0050088 Tmem109 protein_coding protein_coding MGP_WSBEiJ_T0050089.1 MGP_WSBEiJ_G0024129.1 mouse_genomes_project 19 7901030 7903634 - Tmem109 protein_coding retained_intron MGP_WSBEiJ_T0050090.1 MGP_WSBEiJ_G0024129.1 mouse_genomes_project 19 7901085 7910994 - MGP_WSBEiJ_P0050090 Tmem109 protein_coding protein_coding MGP_WSBEiJ_T0050091.1 MGP_WSBEiJ_G0024129.1 mouse_genomes_project 19 7902824 7910704 - Tmem109 protein_coding retained_intron MGP_WSBEiJ_T0050092.1 MGP_WSBEiJ_G0024129.1 mouse_genomes_project 19 7903138 7910724 - MGP_WSBEiJ_P0050092 Tmem109 protein_coding protein_coding MGP_WSBEiJ_T0050093.1 MGP_WSBEiJ_G0024129.1 mouse_genomes_project 19 7903156 7910691 - MGP_WSBEiJ_P0050093 Tmem109 protein_coding protein_coding MGP_WSBEiJ_T0050094.1 MGP_WSBEiJ_G0024129.1 mouse_genomes_project 19 7909406 7910691 - Tmem109 protein_coding processed_transcript MGP_WSBEiJ_T0051023.1 MGP_WSBEiJ_G0024489.1 mouse_genomes_project 19 46246737 46290875 + MGP_WSBEiJ_P0051023 Pdcd11 protein_coding protein_coding MGP_WSBEiJ_T0051059.1 MGP_WSBEiJ_G0024501.1 mouse_genomes_project 19 47056178 47068510 + MGP_WSBEiJ_P0051059 Gsto1 protein_coding protein_coding MGP_WSBEiJ_T0051060.1 MGP_WSBEiJ_G0024501.1 mouse_genomes_project 19 47056291 47056934 + Gsto1 protein_coding retained_intron MGP_WSBEiJ_T0051061.1 MGP_WSBEiJ_G0024501.1 mouse_genomes_project 19 47066714 47068287 + Gsto1 protein_coding retained_intron MGP_WSBEiJ_T0050740.1 MGP_WSBEiJ_G0024398.1 mouse_genomes_project 19 40735645 40746059 + MGP_WSBEiJ_P0050740 Zdhhc16 protein_coding protein_coding MGP_WSBEiJ_T0050741.1 MGP_WSBEiJ_G0024398.1 mouse_genomes_project 19 40735676 40746159 + MGP_WSBEiJ_P0050741 Zdhhc16 protein_coding unknown_likely_coding MGP_WSBEiJ_T0007012.1 MGP_WSBEiJ_G0005758.1 mouse_genomes_project 19 59897421 59915391 + E330013P04Rik lincRNA lincRNA MGP_WSBEiJ_T0007013.1 MGP_WSBEiJ_G0005758.1 mouse_genomes_project 19 59897450 59905836 + E330013P04Rik lincRNA lincRNA MGP_WSBEiJ_T0007014.1 MGP_WSBEiJ_G0005758.1 mouse_genomes_project 19 59904040 59910092 + E330013P04Rik lincRNA lincRNA MGP_WSBEiJ_T0050219.1 MGP_WSBEiJ_G0024188.1 mouse_genomes_project 19 9839493 9864736 + MGP_WSBEiJ_P0050219 Keg1 protein_coding protein_coding MGP_WSBEiJ_T0050220.1 MGP_WSBEiJ_G0024188.1 mouse_genomes_project 19 9839494 9860893 + Keg1 protein_coding processed_transcript MGP_WSBEiJ_T0050221.1 MGP_WSBEiJ_G0024188.1 mouse_genomes_project 19 9839500 9863410 + Keg1 protein_coding retained_intron MGP_WSBEiJ_T0050222.1 MGP_WSBEiJ_G0024188.1 mouse_genomes_project 19 9839500 9863841 + MGP_WSBEiJ_P0050222 Keg1 protein_coding protein_coding MGP_WSBEiJ_T0050223.1 MGP_WSBEiJ_G0024188.1 mouse_genomes_project 19 9839511 9859687 + Keg1 protein_coding retained_intron MGP_WSBEiJ_T0050224.1 MGP_WSBEiJ_G0024188.1 mouse_genomes_project 19 9839521 9859609 + Keg1 protein_coding retained_intron MGP_WSBEiJ_T0050225.1 MGP_WSBEiJ_G0024188.1 mouse_genomes_project 19 9839521 9863951 + MGP_WSBEiJ_P0050225 Keg1 protein_coding protein_coding MGP_WSBEiJ_T0050812.1 MGP_WSBEiJ_G0024419.1 mouse_genomes_project 19 42494282 42497848 + MGP_WSBEiJ_P0050812 Nkx2-3 protein_coding protein_coding MGP_WSBEiJ_T0049835.1 MGP_WSBEiJ_G0024044.1 mouse_genomes_project 19 3895324 3898993 + MGP_WSBEiJ_P0049835 Ppp1r14b protein_coding protein_coding MGP_WSBEiJ_T0007015.1 MGP_WSBEiJ_G0005759.1 mouse_genomes_project 19 59999517 60001247 + Gm28351 lincRNA lincRNA MGP_WSBEiJ_T0050860.1 MGP_WSBEiJ_G0024435.1 mouse_genomes_project 19 43247360 43248992 + Scd4 protein_coding retained_intron MGP_WSBEiJ_T0050861.1 MGP_WSBEiJ_G0024435.1 mouse_genomes_project 19 43247360 43263311 + MGP_WSBEiJ_P0050861 Scd4 protein_coding protein_coding MGP_WSBEiJ_T0049440.1 MGP_WSBEiJ_G0023932.1 mouse_genomes_project 19 1284743 1316002 - MGP_WSBEiJ_P0049440 Syt12 protein_coding protein_coding MGP_WSBEiJ_T0049441.1 MGP_WSBEiJ_G0023932.1 mouse_genomes_project 19 1286569 1290985 - Syt12 protein_coding processed_transcript MGP_WSBEiJ_T0049442.1 MGP_WSBEiJ_G0023932.1 mouse_genomes_project 19 1295648 1315679 - MGP_WSBEiJ_P0049442 Syt12 protein_coding protein_coding MGP_WSBEiJ_T0049443.1 MGP_WSBEiJ_G0023932.1 mouse_genomes_project 19 1304867 1315709 - Syt12 protein_coding retained_intron MGP_WSBEiJ_T0049836.1 MGP_WSBEiJ_G0024045.1 mouse_genomes_project 19 3899247 3902122 - MGP_WSBEiJ_P0049836 Fkbp2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050176.1 MGP_WSBEiJ_G0024157.1 mouse_genomes_project 19 8704788 8723170 - MGP_WSBEiJ_P0050176 Oosp1 protein_coding protein_coding MGP_WSBEiJ_T0050177.1 MGP_WSBEiJ_G0024157.1 mouse_genomes_project 19 8704863 8723048 - MGP_WSBEiJ_P0050177 Oosp1 protein_coding protein_coding MGP_WSBEiJ_T0050178.1 MGP_WSBEiJ_G0024157.1 mouse_genomes_project 19 8705001 8723054 - MGP_WSBEiJ_P0050178 Oosp1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050197.1 MGP_WSBEiJ_G0024173.1 mouse_genomes_project 19 9359460 9360399 - MGP_WSBEiJ_P0050197 Olfr262 protein_coding protein_coding MGP_WSBEiJ_T0050259.1 MGP_WSBEiJ_G0024220.1 mouse_genomes_project 19 11060225 11061170 - MGP_WSBEiJ_P0050259 Olfr1497 protein_coding protein_coding MGP_WSBEiJ_T0050257.1 MGP_WSBEiJ_G0024218.1 mouse_genomes_project 19 11039236 11040328 + MGP_WSBEiJ_P0050257 Olfr1495 protein_coding protein_coding MGP_WSBEiJ_T0050345.1 MGP_WSBEiJ_G0024254.1 mouse_genomes_project 19 20956500 21031498 - MGP_WSBEiJ_P0050345 Smc5 protein_coding protein_coding MGP_WSBEiJ_T0050346.1 MGP_WSBEiJ_G0024254.1 mouse_genomes_project 19 20958887 20965217 - MGP_WSBEiJ_P0050346 Smc5 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050242.1 MGP_WSBEiJ_G0024203.1 mouse_genomes_project 19 10313469 10314570 - MGP_WSBEiJ_P0050242 Olfr1459 protein_coding protein_coding MGP_WSBEiJ_T0017118.1 MGP_WSBEiJ_G0014804.1 mouse_genomes_project 19 9727860 9738987 - A330040F15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0050361.1 MGP_WSBEiJ_G0024265.1 mouse_genomes_project 19 22528876 22534451 + MGP_WSBEiJ_P0050361 Tmem252 protein_coding protein_coding MGP_WSBEiJ_T0050147.1 MGP_WSBEiJ_G0024150.1 mouse_genomes_project 19 8518228 8541663 + protein_coding processed_transcript MGP_WSBEiJ_T0050148.1 MGP_WSBEiJ_G0024150.1 mouse_genomes_project 19 8518330 8519462 + protein_coding processed_transcript MGP_WSBEiJ_T0050149.1 MGP_WSBEiJ_G0024150.1 mouse_genomes_project 19 8518399 8519351 + protein_coding retained_intron MGP_WSBEiJ_T0050150.1 MGP_WSBEiJ_G0024150.1 mouse_genomes_project 19 8524962 8545955 + MGP_WSBEiJ_P0050150 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050151.1 MGP_WSBEiJ_G0024150.1 mouse_genomes_project 19 8524962 8547919 + MGP_WSBEiJ_P0050151 protein_coding protein_coding MGP_WSBEiJ_T0050152.1 MGP_WSBEiJ_G0024150.1 mouse_genomes_project 19 8524974 8543496 + protein_coding retained_intron MGP_WSBEiJ_T0050153.1 MGP_WSBEiJ_G0024150.1 mouse_genomes_project 19 8537738 8547919 + MGP_WSBEiJ_P0050153 protein_coding protein_coding MGP_WSBEiJ_T0010129.1 MGP_WSBEiJ_G0008286.1 mouse_genomes_project 19 5953819 5953895 - Mir5136 miRNA miRNA MGP_WSBEiJ_T0010130.1 MGP_WSBEiJ_G0008287.1 mouse_genomes_project 19 6828506 6828610 + Gm22369 miRNA miRNA MGP_WSBEiJ_T0050448.1 MGP_WSBEiJ_G0024290.1 mouse_genomes_project 19 27426856 27436621 - MGP_WSBEiJ_P0050448 Plgrkt protein_coding protein_coding MGP_WSBEiJ_T0050449.1 MGP_WSBEiJ_G0024290.1 mouse_genomes_project 19 27428649 27430110 - Plgrkt protein_coding retained_intron MGP_WSBEiJ_T0050450.1 MGP_WSBEiJ_G0024290.1 mouse_genomes_project 19 27429279 27439661 - MGP_WSBEiJ_P0050450 Plgrkt protein_coding protein_coding MGP_WSBEiJ_T0050451.1 MGP_WSBEiJ_G0024290.1 mouse_genomes_project 19 27429373 27440078 - MGP_WSBEiJ_P0050451 Plgrkt protein_coding protein_coding MGP_WSBEiJ_T0050452.1 MGP_WSBEiJ_G0024290.1 mouse_genomes_project 19 27436599 27445534 - MGP_WSBEiJ_P0050452 Plgrkt protein_coding protein_coding MGP_WSBEiJ_T0050453.1 MGP_WSBEiJ_G0024290.1 mouse_genomes_project 19 27439107 27442120 - Plgrkt protein_coding processed_transcript MGP_WSBEiJ_T0050454.1 MGP_WSBEiJ_G0024290.1 mouse_genomes_project 19 27440335 27442686 - Plgrkt protein_coding processed_transcript MGP_WSBEiJ_T0050455.1 MGP_WSBEiJ_G0024290.1 mouse_genomes_project 19 27442298 27445616 - Plgrkt protein_coding processed_transcript MGP_WSBEiJ_T0013048.1 MGP_WSBEiJ_G0011178.1 mouse_genomes_project 19 26798445 26798715 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049516.1 MGP_WSBEiJ_G0023963.1 mouse_genomes_project 19 2023434 2179260 - MGP_WSBEiJ_P0049516 Pacs1 protein_coding protein_coding MGP_WSBEiJ_T0050336.1 MGP_WSBEiJ_G0024251.1 mouse_genomes_project 19 19500517 19584732 + MGP_WSBEiJ_P0050336 Tmem2 protein_coding protein_coding MGP_WSBEiJ_T0050337.1 MGP_WSBEiJ_G0024251.1 mouse_genomes_project 19 19500517 19584731 + MGP_WSBEiJ_P0050337 Tmem2 protein_coding protein_coding MGP_WSBEiJ_T0050637.1 MGP_WSBEiJ_G0024359.1 mouse_genomes_project 19 37021938 37032539 + MGP_WSBEiJ_P0050637 Slc35g1 protein_coding protein_coding MGP_WSBEiJ_T0050825.1 MGP_WSBEiJ_G0024424.1 mouse_genomes_project 19 42678835 42740186 + MGP_WSBEiJ_P0050825 Abcc2 protein_coding protein_coding MGP_WSBEiJ_T0050826.1 MGP_WSBEiJ_G0024424.1 mouse_genomes_project 19 42678969 42681290 + Abcc2 protein_coding retained_intron MGP_WSBEiJ_T0050827.1 MGP_WSBEiJ_G0024424.1 mouse_genomes_project 19 42679047 42725581 + MGP_WSBEiJ_P0050827 Abcc2 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050828.1 MGP_WSBEiJ_G0024424.1 mouse_genomes_project 19 42697114 42699894 + Abcc2 protein_coding retained_intron MGP_WSBEiJ_T0050829.1 MGP_WSBEiJ_G0024424.1 mouse_genomes_project 19 42709400 42712280 + Abcc2 protein_coding retained_intron MGP_WSBEiJ_T0050830.1 MGP_WSBEiJ_G0024424.1 mouse_genomes_project 19 42738253 42740174 + MGP_WSBEiJ_P0050830 Abcc2 protein_coding protein_coding MGP_WSBEiJ_T0050507.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30317789 30589323 - MGP_WSBEiJ_P0050507 Sgms1 protein_coding protein_coding MGP_WSBEiJ_T0050508.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30317792 30548414 - MGP_WSBEiJ_P0050508 Sgms1 protein_coding protein_coding MGP_WSBEiJ_T0050509.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30318543 30403270 - MGP_WSBEiJ_P0050509 Sgms1 protein_coding protein_coding MGP_WSBEiJ_T0050510.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30319209 30473214 - MGP_WSBEiJ_P0050510 Sgms1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050511.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30319211 30357367 - MGP_WSBEiJ_P0050511 Sgms1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050512.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30355399 30590520 - Sgms1 protein_coding retained_intron MGP_WSBEiJ_T0050513.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30357204 30394784 - MGP_WSBEiJ_P0050513 Sgms1 protein_coding protein_coding MGP_WSBEiJ_T0050514.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30357301 30432871 - Sgms1 protein_coding processed_transcript MGP_WSBEiJ_T0050515.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30357313 30520992 - Sgms1 protein_coding processed_transcript MGP_WSBEiJ_T0050516.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30357442 30473188 - Sgms1 protein_coding processed_transcript MGP_WSBEiJ_T0050517.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30411772 30443174 - Sgms1 protein_coding processed_transcript MGP_WSBEiJ_T0050518.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30413601 30486763 - Sgms1 protein_coding retained_intron MGP_WSBEiJ_T0050519.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30416333 30432885 - Sgms1 protein_coding retained_intron MGP_WSBEiJ_T0050520.1 MGP_WSBEiJ_G0024308.1 mouse_genomes_project 19 30486462 30589274 - Sgms1 protein_coding retained_intron MGP_WSBEiJ_T0050256.1 MGP_WSBEiJ_G0024217.1 mouse_genomes_project 19 11019410 11020358 + MGP_WSBEiJ_P0050256 Olfr1494 protein_coding protein_coding MGP_WSBEiJ_T0051166.1 MGP_WSBEiJ_G0024534.1 mouse_genomes_project 19 56399790 56436045 - MGP_WSBEiJ_P0051166 Ccdc186 protein_coding protein_coding MGP_WSBEiJ_T0051167.1 MGP_WSBEiJ_G0024534.1 mouse_genomes_project 19 56402845 56407452 - MGP_WSBEiJ_P0051167 Ccdc186 protein_coding protein_coding MGP_WSBEiJ_T0051168.1 MGP_WSBEiJ_G0024534.1 mouse_genomes_project 19 56403277 56426492 - MGP_WSBEiJ_P0051168 Ccdc186 protein_coding protein_coding MGP_WSBEiJ_T0051169.1 MGP_WSBEiJ_G0024534.1 mouse_genomes_project 19 56405276 56410294 - Ccdc186 protein_coding retained_intron MGP_WSBEiJ_T0051170.1 MGP_WSBEiJ_G0024534.1 mouse_genomes_project 19 56410133 56413765 - Ccdc186 protein_coding retained_intron MGP_WSBEiJ_T0051171.1 MGP_WSBEiJ_G0024534.1 mouse_genomes_project 19 56412815 56436045 - Ccdc186 protein_coding retained_intron MGP_WSBEiJ_T0050521.1 MGP_WSBEiJ_G0024309.1 mouse_genomes_project 19 30690197 30720629 + MGP_WSBEiJ_P0050521 Minpp1 protein_coding protein_coding MGP_WSBEiJ_T0051108.1 MGP_WSBEiJ_G0024521.1 mouse_genomes_project 19 54710361 54719315 + MGP_WSBEiJ_P0051108 Tectb protein_coding protein_coding MGP_WSBEiJ_T0051109.1 MGP_WSBEiJ_G0024521.1 mouse_genomes_project 19 54710364 54724525 + MGP_WSBEiJ_P0051109 Tectb protein_coding protein_coding MGP_WSBEiJ_T0051110.1 MGP_WSBEiJ_G0024521.1 mouse_genomes_project 19 54710513 54725966 + MGP_WSBEiJ_P0051110 Tectb protein_coding protein_coding MGP_WSBEiJ_T0051111.1 MGP_WSBEiJ_G0024521.1 mouse_genomes_project 19 54719227 54724351 + MGP_WSBEiJ_P0051111 Tectb protein_coding protein_coding MGP_WSBEiJ_T0051112.1 MGP_WSBEiJ_G0024521.1 mouse_genomes_project 19 54719279 54719974 + Tectb protein_coding retained_intron MGP_WSBEiJ_T0051113.1 MGP_WSBEiJ_G0024521.1 mouse_genomes_project 19 54721677 54725957 + Tectb protein_coding processed_transcript MGP_WSBEiJ_T0006961.1 MGP_WSBEiJ_G0005721.1 mouse_genomes_project 19 7384642 7387245 - Gm26859 lincRNA lincRNA MGP_WSBEiJ_T0050558.1 MGP_WSBEiJ_G0024333.1 mouse_genomes_project 19 33211626 33281418 - MGP_WSBEiJ_P0050558 Pank1 protein_coding protein_coding MGP_WSBEiJ_T0050559.1 MGP_WSBEiJ_G0024333.1 mouse_genomes_project 19 33211627 33279880 - MGP_WSBEiJ_P0050559 Pank1 protein_coding protein_coding MGP_WSBEiJ_T0007009.1 MGP_WSBEiJ_G0005755.1 mouse_genomes_project 19 58293733 58320380 + 1810007D17Rik lincRNA lincRNA MGP_WSBEiJ_T0097170.1 MGP_WSBEiJ_G0035851.1 mouse_genomes_project 19 35693739 35693817 - Gm22714 ribozyme ribozyme MGP_WSBEiJ_T0049579.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2600971 2624555 - MGP_WSBEiJ_P0049579 Pcnx3 protein_coding protein_coding MGP_WSBEiJ_T0049580.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2600974 2610284 - Pcnx3 protein_coding retained_intron MGP_WSBEiJ_T0049581.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2600976 2623796 - MGP_WSBEiJ_P0049581 Pcnx3 protein_coding protein_coding MGP_WSBEiJ_T0049582.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2601572 2602535 - Pcnx3 protein_coding retained_intron MGP_WSBEiJ_T0049583.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2601752 2603319 - MGP_WSBEiJ_P0049583 Pcnx3 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049584.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2602327 2602863 - Pcnx3 protein_coding retained_intron MGP_WSBEiJ_T0049585.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2609628 2620442 - MGP_WSBEiJ_P0049585 Pcnx3 protein_coding protein_coding MGP_WSBEiJ_T0049586.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2611259 2615361 - MGP_WSBEiJ_P0049586 Pcnx3 protein_coding protein_coding MGP_WSBEiJ_T0049587.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2614766 2619117 - MGP_WSBEiJ_P0049587 Pcnx3 protein_coding protein_coding MGP_WSBEiJ_T0049588.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2615186 2619647 - MGP_WSBEiJ_P0049588 Pcnx3 protein_coding protein_coding MGP_WSBEiJ_T0049589.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2615717 2617320 - Pcnx3 protein_coding retained_intron MGP_WSBEiJ_T0049590.1 MGP_WSBEiJ_G0023989.1 mouse_genomes_project 19 2619514 2624342 - Pcnx3 protein_coding retained_intron MGP_WSBEiJ_T0006984.1 MGP_WSBEiJ_G0005737.1 mouse_genomes_project 19 33470967 33475003 - Gm5248 lincRNA lincRNA MGP_WSBEiJ_T0003799.1 MGP_WSBEiJ_G0003400.1 mouse_genomes_project 19 46705872 46709469 + Gm19557 antisense antisense MGP_WSBEiJ_T0050536.1 MGP_WSBEiJ_G0024320.1 mouse_genomes_project 19 32491214 32527766 - MGP_WSBEiJ_P0050536 Ankrd22 protein_coding protein_coding MGP_WSBEiJ_T0050537.1 MGP_WSBEiJ_G0024320.1 mouse_genomes_project 19 32491590 32497491 - Ankrd22 protein_coding processed_transcript MGP_WSBEiJ_T0006950.1 MGP_WSBEiJ_G0005716.1 mouse_genomes_project 19 981308 986027 + Gm17552 lincRNA lincRNA MGP_WSBEiJ_T0051013.1 MGP_WSBEiJ_G0024483.1 mouse_genomes_project 19 45900207 46025919 + MGP_WSBEiJ_P0051013 Cnnm2 protein_coding protein_coding MGP_WSBEiJ_T0051014.1 MGP_WSBEiJ_G0024483.1 mouse_genomes_project 19 45900207 46025919 + MGP_WSBEiJ_P0051014 Cnnm2 protein_coding protein_coding MGP_WSBEiJ_T0049566.1 MGP_WSBEiJ_G0023983.1 mouse_genomes_project 19 2477539 2488997 - MGP_WSBEiJ_P0049566 Ovol1 protein_coding protein_coding MGP_WSBEiJ_T0049533.1 MGP_WSBEiJ_G0023973.1 mouse_genomes_project 19 2346542 2348699 + AI837181 protein_coding processed_transcript MGP_WSBEiJ_T0049534.1 MGP_WSBEiJ_G0023973.1 mouse_genomes_project 19 2346542 2348699 + MGP_WSBEiJ_P0049534 AI837181 protein_coding protein_coding MGP_WSBEiJ_T0003785.1 MGP_WSBEiJ_G0003390.1 mouse_genomes_project 19 20162235 20177783 - Gm27151 antisense antisense MGP_WSBEiJ_T0003786.1 MGP_WSBEiJ_G0003390.1 mouse_genomes_project 19 20162265 20178506 - Gm27151 antisense antisense MGP_WSBEiJ_T0097201.1 MGP_WSBEiJ_G0035882.1 mouse_genomes_project 19 8727099 8727238 + Gm26183 scaRNA scaRNA MGP_WSBEiJ_T0050200.1 MGP_WSBEiJ_G0024176.1 mouse_genomes_project 19 9412494 9413594 + MGP_WSBEiJ_P0050200 protein_coding protein_coding MGP_WSBEiJ_T0099323.1 MGP_WSBEiJ_G0037986.1 mouse_genomes_project 19 55857443 55857571 - Gm22271 snoRNA snoRNA MGP_WSBEiJ_T0049854.1 MGP_WSBEiJ_G0024055.1 mouse_genomes_project 19 4158144 4162025 - MGP_WSBEiJ_P0049854 Cox8a protein_coding protein_coding MGP_WSBEiJ_T0049807.1 MGP_WSBEiJ_G0024033.1 mouse_genomes_project 19 3545528 3552693 - MGP_WSBEiJ_P0049807 Slc22a12 protein_coding protein_coding MGP_WSBEiJ_T0049808.1 MGP_WSBEiJ_G0024033.1 mouse_genomes_project 19 3545735 3551223 - Slc22a12 protein_coding processed_transcript MGP_WSBEiJ_T0049809.1 MGP_WSBEiJ_G0024033.1 mouse_genomes_project 19 3547407 3552385 - MGP_WSBEiJ_P0049809 Slc22a12 protein_coding protein_coding MGP_WSBEiJ_T0017123.1 MGP_WSBEiJ_G0014808.1 mouse_genomes_project 19 35129343 35227358 - 1500017E21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017124.1 MGP_WSBEiJ_G0014808.1 mouse_genomes_project 19 35135960 35207888 - 1500017E21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017125.1 MGP_WSBEiJ_G0014808.1 mouse_genomes_project 19 35135972 35143676 - 1500017E21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017126.1 MGP_WSBEiJ_G0014808.1 mouse_genomes_project 19 35135977 35143656 - 1500017E21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017127.1 MGP_WSBEiJ_G0014808.1 mouse_genomes_project 19 35162390 35176365 - 1500017E21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017128.1 MGP_WSBEiJ_G0014808.1 mouse_genomes_project 19 35164527 35207682 - 1500017E21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017129.1 MGP_WSBEiJ_G0014808.1 mouse_genomes_project 19 35176208 35207741 - 1500017E21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017130.1 MGP_WSBEiJ_G0014808.1 mouse_genomes_project 19 35176377 35207737 - 1500017E21Rik processed_transcript processed_transcript MGP_WSBEiJ_T0051067.1 MGP_WSBEiJ_G0024504.1 mouse_genomes_project 19 47430554 48056881 + MGP_WSBEiJ_P0051067 Sorcs3 protein_coding protein_coding MGP_WSBEiJ_T0003801.1 MGP_WSBEiJ_G0003402.1 mouse_genomes_project 19 53281281 53286915 - Gm16299 antisense antisense MGP_WSBEiJ_T0049319.1 MGP_WSBEiJ_G0023902.1 mouse_genomes_project 19 695522 712698 - MGP_WSBEiJ_P0049319 Aldh3b1 protein_coding protein_coding MGP_WSBEiJ_T0049320.1 MGP_WSBEiJ_G0023902.1 mouse_genomes_project 19 695558 713780 - MGP_WSBEiJ_P0049320 Aldh3b1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050796.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41590729 41616792 - MGP_WSBEiJ_P0050796 Hps1 protein_coding protein_coding MGP_WSBEiJ_T0050797.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41590819 41616773 - Hps1 protein_coding retained_intron MGP_WSBEiJ_T0050798.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41590819 41615460 - MGP_WSBEiJ_P0050798 Hps1 protein_coding protein_coding MGP_WSBEiJ_T0050799.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41590821 41616790 - MGP_WSBEiJ_P0050799 Hps1 protein_coding protein_coding MGP_WSBEiJ_T0050800.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41591205 41593437 - MGP_WSBEiJ_P0050800 Hps1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050801.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41593688 41616779 - MGP_WSBEiJ_P0050801 Hps1 protein_coding protein_coding MGP_WSBEiJ_T0050802.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41594088 41615075 - MGP_WSBEiJ_P0050802 Hps1 protein_coding protein_coding MGP_WSBEiJ_T0050803.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41595973 41599486 - Hps1 protein_coding retained_intron MGP_WSBEiJ_T0050804.1 MGP_WSBEiJ_G0024415.1 mouse_genomes_project 19 41603678 41606680 - Hps1 protein_coding retained_intron MGP_WSBEiJ_T0049445.1 MGP_WSBEiJ_G0023934.1 mouse_genomes_project 19 1350668 1457152 + MGP_WSBEiJ_P0049445 Pcx protein_coding unknown_likely_coding MGP_WSBEiJ_T0049446.1 MGP_WSBEiJ_G0023934.1 mouse_genomes_project 19 1350778 1468139 + MGP_WSBEiJ_P0049446 Pcx protein_coding protein_coding MGP_WSBEiJ_T0049447.1 MGP_WSBEiJ_G0023934.1 mouse_genomes_project 19 1440661 1468139 + MGP_WSBEiJ_P0049447 Pcx protein_coding protein_coding MGP_WSBEiJ_T0050784.1 MGP_WSBEiJ_G0024411.1 mouse_genomes_project 19 41109598 41256088 - MGP_WSBEiJ_P0050784 Crtac1 protein_coding protein_coding MGP_WSBEiJ_T0049989.1 MGP_WSBEiJ_G0024088.1 mouse_genomes_project 19 5953973 5956082 + MGP_WSBEiJ_P0049989 1810009A15Rik protein_coding protein_coding MGP_WSBEiJ_T0049991.1 MGP_WSBEiJ_G0024088.1 mouse_genomes_project 19 5954019 5955947 + 1810009A15Rik protein_coding retained_intron MGP_WSBEiJ_T0049992.1 MGP_WSBEiJ_G0024088.1 mouse_genomes_project 19 5954035 5955747 + MGP_WSBEiJ_P0049992 1810009A15Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049993.1 MGP_WSBEiJ_G0024088.1 mouse_genomes_project 19 5954049 5955577 + 1810009A15Rik protein_coding retained_intron MGP_WSBEiJ_T0049994.1 MGP_WSBEiJ_G0024088.1 mouse_genomes_project 19 5954059 5955942 + 1810009A15Rik protein_coding retained_intron MGP_WSBEiJ_T0017109.1 MGP_WSBEiJ_G0014802.1 mouse_genomes_project 19 7763470 7812307 + A430093F15Rik processed_transcript lincRNA MGP_WSBEiJ_T0017110.1 MGP_WSBEiJ_G0014802.1 mouse_genomes_project 19 7763474 7812298 + A430093F15Rik processed_transcript lincRNA MGP_WSBEiJ_T0017111.1 MGP_WSBEiJ_G0014802.1 mouse_genomes_project 19 7763483 7811941 + A430093F15Rik processed_transcript lincRNA MGP_WSBEiJ_T0017112.1 MGP_WSBEiJ_G0014802.1 mouse_genomes_project 19 7771452 7779849 + A430093F15Rik processed_transcript retained_intron MGP_WSBEiJ_T0017113.1 MGP_WSBEiJ_G0014802.1 mouse_genomes_project 19 7808178 7812303 + A430093F15Rik processed_transcript lincRNA MGP_WSBEiJ_T0017114.1 MGP_WSBEiJ_G0014802.1 mouse_genomes_project 19 7811615 7812300 + A430093F15Rik processed_transcript retained_intron MGP_WSBEiJ_T0050067.1 MGP_WSBEiJ_G0024118.1 mouse_genomes_project 19 7575891 7582749 - MGP_WSBEiJ_P0050067 Tmem138 protein_coding protein_coding MGP_WSBEiJ_T0050762.1 MGP_WSBEiJ_G0024402.1 mouse_genomes_project 19 40853491 40861457 + Hoga1 protein_coding processed_transcript MGP_WSBEiJ_T0050763.1 MGP_WSBEiJ_G0024402.1 mouse_genomes_project 19 40853673 40882447 + MGP_WSBEiJ_P0050763 Hoga1 protein_coding protein_coding MGP_WSBEiJ_T0050764.1 MGP_WSBEiJ_G0024402.1 mouse_genomes_project 19 40853713 40883035 + MGP_WSBEiJ_P0050764 Hoga1 protein_coding protein_coding MGP_WSBEiJ_T0050765.1 MGP_WSBEiJ_G0024402.1 mouse_genomes_project 19 40853732 40871328 + Hoga1 protein_coding retained_intron MGP_WSBEiJ_T0050085.1 MGP_WSBEiJ_G0024128.1 mouse_genomes_project 19 7884854 7898843 - MGP_WSBEiJ_P0050085 Tmem132a protein_coding protein_coding MGP_WSBEiJ_T0050086.1 MGP_WSBEiJ_G0024128.1 mouse_genomes_project 19 7884866 7898681 - MGP_WSBEiJ_P0050086 Tmem132a protein_coding protein_coding MGP_WSBEiJ_T0050889.1 MGP_WSBEiJ_G0024447.1 mouse_genomes_project 19 43993315 44008094 + MGP_WSBEiJ_P0050889 Lzts2 protein_coding protein_coding MGP_WSBEiJ_T0050890.1 MGP_WSBEiJ_G0024447.1 mouse_genomes_project 19 43993349 44008094 + MGP_WSBEiJ_P0050890 Lzts2 protein_coding protein_coding MGP_WSBEiJ_T0050891.1 MGP_WSBEiJ_G0024447.1 mouse_genomes_project 19 43997994 44008094 + MGP_WSBEiJ_P0050891 Lzts2 protein_coding protein_coding MGP_WSBEiJ_T0050040.1 MGP_WSBEiJ_G0024109.1 mouse_genomes_project 19 7197460 7201274 + Tmem258 protein_coding processed_transcript MGP_WSBEiJ_T0050041.1 MGP_WSBEiJ_G0024109.1 mouse_genomes_project 19 7197460 7201274 + MGP_WSBEiJ_P0050041 Tmem258 protein_coding protein_coding MGP_WSBEiJ_T0050042.1 MGP_WSBEiJ_G0024109.1 mouse_genomes_project 19 7197665 7201268 + Tmem258 protein_coding retained_intron MGP_WSBEiJ_T0050043.1 MGP_WSBEiJ_G0024109.1 mouse_genomes_project 19 7199480 7201274 + MGP_WSBEiJ_P0050043 Tmem258 protein_coding protein_coding MGP_WSBEiJ_T0049713.1 MGP_WSBEiJ_G0024025.1 mouse_genomes_project 19 3274989 3299456 + MGP_WSBEiJ_P0049713 Ehd1 protein_coding protein_coding MGP_WSBEiJ_T0049714.1 MGP_WSBEiJ_G0024025.1 mouse_genomes_project 19 3275189 3279661 + Ehd1 protein_coding retained_intron MGP_WSBEiJ_T0049715.1 MGP_WSBEiJ_G0024025.1 mouse_genomes_project 19 3293574 3297236 + Ehd1 protein_coding retained_intron MGP_WSBEiJ_T0049716.1 MGP_WSBEiJ_G0024025.1 mouse_genomes_project 19 3297272 3297719 + Ehd1 protein_coding processed_transcript MGP_WSBEiJ_T0010144.1 MGP_WSBEiJ_G0008301.1 mouse_genomes_project 19 37684639 37684703 - Gm23800 miRNA miRNA MGP_WSBEiJ_T0049849.1 MGP_WSBEiJ_G0024054.1 mouse_genomes_project 19 4140860 4148783 - MGP_WSBEiJ_P0049849 Otub1 protein_coding protein_coding MGP_WSBEiJ_T0049850.1 MGP_WSBEiJ_G0024054.1 mouse_genomes_project 19 4140868 4148701 - MGP_WSBEiJ_P0049850 Otub1 protein_coding protein_coding MGP_WSBEiJ_T0049851.1 MGP_WSBEiJ_G0024054.1 mouse_genomes_project 19 4142192 4143117 - Otub1 protein_coding retained_intron MGP_WSBEiJ_T0049852.1 MGP_WSBEiJ_G0024054.1 mouse_genomes_project 19 4142363 4148242 - MGP_WSBEiJ_P0049852 Otub1 protein_coding protein_coding MGP_WSBEiJ_T0049853.1 MGP_WSBEiJ_G0024054.1 mouse_genomes_project 19 4142393 4146886 - Otub1 protein_coding retained_intron MGP_WSBEiJ_T0006966.1 MGP_WSBEiJ_G0005726.1 mouse_genomes_project 19 13367187 13393820 + C130060C02Rik lincRNA lincRNA MGP_WSBEiJ_T0049837.1 MGP_WSBEiJ_G0024046.1 mouse_genomes_project 19 3905762 3911934 - MGP_WSBEiJ_P0049837 Vegfb protein_coding protein_coding MGP_WSBEiJ_T0049838.1 MGP_WSBEiJ_G0024046.1 mouse_genomes_project 19 3905762 3911912 - MGP_WSBEiJ_P0049838 Vegfb protein_coding protein_coding MGP_WSBEiJ_T0049839.1 MGP_WSBEiJ_G0024046.1 mouse_genomes_project 19 3910676 3911423 - Vegfb protein_coding retained_intron MGP_WSBEiJ_T0013054.1 MGP_WSBEiJ_G0011184.1 mouse_genomes_project 19 51133308 51133685 + processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049657.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3053677 3066172 - MGP_WSBEiJ_P0049657 Vps51 protein_coding protein_coding MGP_WSBEiJ_T0049658.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3053825 3055155 - Vps51 protein_coding retained_intron MGP_WSBEiJ_T0049659.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3053829 3063061 - MGP_WSBEiJ_P0049659 Vps51 protein_coding protein_coding MGP_WSBEiJ_T0049660.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3053886 3054986 - Vps51 protein_coding retained_intron MGP_WSBEiJ_T0049661.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3054052 3054907 - MGP_WSBEiJ_P0049661 Vps51 protein_coding protein_coding MGP_WSBEiJ_T0049662.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3054584 3055449 - Vps51 protein_coding retained_intron MGP_WSBEiJ_T0049663.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3054703 3055534 - Vps51 protein_coding retained_intron MGP_WSBEiJ_T0049664.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3055916 3063067 - Vps51 protein_coding retained_intron MGP_WSBEiJ_T0049665.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3057252 3062732 - Vps51 protein_coding retained_intron MGP_WSBEiJ_T0049666.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3057317 3063062 - MGP_WSBEiJ_P0049666 Vps51 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049667.1 MGP_WSBEiJ_G0024011.1 mouse_genomes_project 19 3061766 3063064 - MGP_WSBEiJ_P0049667 Vps51 protein_coding protein_coding MGP_WSBEiJ_T0050531.1 MGP_WSBEiJ_G0024317.1 mouse_genomes_project 19 32382300 32414814 + MGP_WSBEiJ_P0050531 Lipk protein_coding protein_coding MGP_WSBEiJ_T0098070.1 MGP_WSBEiJ_G0036733.1 mouse_genomes_project 19 28086374 28086540 + Gm26046 snRNA snRNA MGP_WSBEiJ_T0098060.1 MGP_WSBEiJ_G0036723.1 mouse_genomes_project 19 1772443 1772553 + Gm25334 snRNA snRNA MGP_WSBEiJ_T0049415.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1111785 1133821 - MGP_WSBEiJ_P0049415 Adrbk1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049416.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1111785 1133746 - MGP_WSBEiJ_P0049416 Adrbk1 protein_coding protein_coding MGP_WSBEiJ_T0049417.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1111786 1134013 - MGP_WSBEiJ_P0049417 Adrbk1 protein_coding protein_coding MGP_WSBEiJ_T0049418.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1111805 1134005 - MGP_WSBEiJ_P0049418 Adrbk1 protein_coding protein_coding MGP_WSBEiJ_T0049419.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1113932 1116363 - Adrbk1 protein_coding retained_intron MGP_WSBEiJ_T0049420.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1115354 1116354 - MGP_WSBEiJ_P0049420 Adrbk1 protein_coding protein_coding MGP_WSBEiJ_T0049421.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1115384 1117443 - MGP_WSBEiJ_P0049421 Adrbk1 protein_coding protein_coding MGP_WSBEiJ_T0049422.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1117421 1118771 - Adrbk1 protein_coding retained_intron MGP_WSBEiJ_T0049423.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1118306 1133818 - Adrbk1 protein_coding retained_intron MGP_WSBEiJ_T0049424.1 MGP_WSBEiJ_G0023929.1 mouse_genomes_project 19 1119526 1132999 - MGP_WSBEiJ_P0049424 Adrbk1 protein_coding protein_coding MGP_WSBEiJ_T0049270.1 MGP_WSBEiJ_G0023896.1 mouse_genomes_project 19 343260 450338 - MGP_WSBEiJ_P0049270 Lrp5 protein_coding protein_coding MGP_WSBEiJ_T0049271.1 MGP_WSBEiJ_G0023896.1 mouse_genomes_project 19 343263 450343 - MGP_WSBEiJ_P0049271 Lrp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049272.1 MGP_WSBEiJ_G0023896.1 mouse_genomes_project 19 343268 377767 - MGP_WSBEiJ_P0049272 Lrp5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049273.1 MGP_WSBEiJ_G0023896.1 mouse_genomes_project 19 383613 450346 - MGP_WSBEiJ_P0049273 Lrp5 protein_coding protein_coding MGP_WSBEiJ_T0050000.1 MGP_WSBEiJ_G0024092.1 mouse_genomes_project 19 5993341 5995316 - MGP_WSBEiJ_P0050000 Rom1 protein_coding protein_coding MGP_WSBEiJ_T0099305.1 MGP_WSBEiJ_G0037968.1 mouse_genomes_project 19 5772988 5773114 + Snord22 snoRNA snoRNA MGP_WSBEiJ_T0050115.1 MGP_WSBEiJ_G0024136.1 mouse_genomes_project 19 8032460 8052991 - MGP_WSBEiJ_P0050115 Ms4a18 protein_coding protein_coding MGP_WSBEiJ_T0049473.1 MGP_WSBEiJ_G0023945.1 mouse_genomes_project 19 1713064 1718848 + MGP_WSBEiJ_P0049473 Ctsf protein_coding protein_coding MGP_WSBEiJ_T0051066.1 MGP_WSBEiJ_G0024503.1 mouse_genomes_project 19 47146085 47249443 + MGP_WSBEiJ_P0051066 Cfap58 protein_coding protein_coding MGP_WSBEiJ_T0050075.1 MGP_WSBEiJ_G0024125.1 mouse_genomes_project 19 7739922 7761664 - MGP_WSBEiJ_P0050075 Cd5 protein_coding protein_coding MGP_WSBEiJ_T0049266.1 MGP_WSBEiJ_G0023894.1 mouse_genomes_project 19 162531 167088 - MGP_WSBEiJ_P0049266 Gal protein_coding protein_coding MGP_WSBEiJ_T0049683.1 MGP_WSBEiJ_G0024016.1 mouse_genomes_project 19 3091894 3103866 + MGP_WSBEiJ_P0049683 Naaladl1 protein_coding protein_coding MGP_WSBEiJ_T0049907.1 MGP_WSBEiJ_G0024069.1 mouse_genomes_project 19 5635109 5656335 + MGP_WSBEiJ_P0049907 Slc22a8 protein_coding protein_coding MGP_WSBEiJ_T0049908.1 MGP_WSBEiJ_G0024069.1 mouse_genomes_project 19 5635109 5656335 + MGP_WSBEiJ_P0049908 Slc22a8 protein_coding protein_coding MGP_WSBEiJ_T0098075.1 MGP_WSBEiJ_G0036738.1 mouse_genomes_project 19 40778303 40778402 + Gm23113 snRNA snRNA MGP_WSBEiJ_T0100681.1 MGP_WSBEiJ_G0039139.1 mouse_genomes_project 19 8610146 8613828 + unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0050473.1 MGP_WSBEiJ_G0024295.1 mouse_genomes_project 19 27777298 27792690 + MGP_WSBEiJ_P0050473 Mlana protein_coding unknown_likely_coding MGP_WSBEiJ_T0017107.1 MGP_WSBEiJ_G0014801.1 mouse_genomes_project 19 7190958 7194974 + Gm10143 processed_transcript processed_transcript MGP_WSBEiJ_T0017108.1 MGP_WSBEiJ_G0014801.1 mouse_genomes_project 19 7191777 7194972 + Gm10143 processed_transcript processed_transcript MGP_WSBEiJ_T0010126.1 MGP_WSBEiJ_G0008283.1 mouse_genomes_project 19 3826241 3826332 - Mir6990 miRNA miRNA MGP_WSBEiJ_T0050112.1 MGP_WSBEiJ_G0024135.1 mouse_genomes_project 19 8013751 8028698 - MGP_WSBEiJ_P0050112 Ms4a15 protein_coding protein_coding MGP_WSBEiJ_T0050113.1 MGP_WSBEiJ_G0024135.1 mouse_genomes_project 19 8018601 8028629 - MGP_WSBEiJ_P0050113 Ms4a15 protein_coding protein_coding MGP_WSBEiJ_T0050114.1 MGP_WSBEiJ_G0024135.1 mouse_genomes_project 19 8018687 8028678 - MGP_WSBEiJ_P0050114 Ms4a15 protein_coding protein_coding MGP_WSBEiJ_T0050278.1 MGP_WSBEiJ_G0024230.1 mouse_genomes_project 19 14046336 14226292 - MGP_WSBEiJ_P0050278 Vps13a protein_coding protein_coding MGP_WSBEiJ_T0050279.1 MGP_WSBEiJ_G0024230.1 mouse_genomes_project 19 14063253 14226239 - MGP_WSBEiJ_P0050279 Vps13a protein_coding unknown_likely_coding MGP_WSBEiJ_T0050671.1 MGP_WSBEiJ_G0024375.1 mouse_genomes_project 19 38889852 38924607 - MGP_WSBEiJ_P0050671 Cyp2c70 protein_coding protein_coding MGP_WSBEiJ_T0050672.1 MGP_WSBEiJ_G0024375.1 mouse_genomes_project 19 38900834 38924607 - MGP_WSBEiJ_P0050672 Cyp2c70 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050673.1 MGP_WSBEiJ_G0024375.1 mouse_genomes_project 19 38901909 38924607 - MGP_WSBEiJ_P0050673 Cyp2c70 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050674.1 MGP_WSBEiJ_G0024375.1 mouse_genomes_project 19 38916887 38924654 - Cyp2c70 protein_coding retained_intron MGP_WSBEiJ_T0010152.1 MGP_WSBEiJ_G0008309.1 mouse_genomes_project 19 45426924 45427033 + Mir146b miRNA miRNA MGP_WSBEiJ_T0049680.1 MGP_WSBEiJ_G0024015.1 mouse_genomes_project 19 3070824 3077619 + MGP_WSBEiJ_P0049680 Cdca5 protein_coding protein_coding MGP_WSBEiJ_T0049681.1 MGP_WSBEiJ_G0024015.1 mouse_genomes_project 19 3071592 3077619 + Cdca5 protein_coding processed_transcript MGP_WSBEiJ_T0049682.1 MGP_WSBEiJ_G0024015.1 mouse_genomes_project 19 3071668 3077619 + Cdca5 protein_coding processed_transcript MGP_WSBEiJ_T0049567.1 MGP_WSBEiJ_G0023984.1 mouse_genomes_project 19 2497108 2500296 + MGP_WSBEiJ_P0049567 Ap5b1 protein_coding protein_coding MGP_WSBEiJ_T0010115.1 MGP_WSBEiJ_G0008272.1 mouse_genomes_project 19 1031479 1031566 - Gm26115 miRNA miRNA MGP_WSBEiJ_T0100682.1 MGP_WSBEiJ_G0039140.1 mouse_genomes_project 19 32047351 32161825 - unprocessed_pseudogene unprocessed_pseudogene MGP_WSBEiJ_T0049573.1 MGP_WSBEiJ_G0023986.1 mouse_genomes_project 19 2535686 2542775 - MGP_WSBEiJ_P0049573 Kat5 protein_coding protein_coding MGP_WSBEiJ_T0049321.1 MGP_WSBEiJ_G0023903.1 mouse_genomes_project 19 720730 734755 + MGP_WSBEiJ_P0049321 Unc93b1 protein_coding protein_coding MGP_WSBEiJ_T0049322.1 MGP_WSBEiJ_G0023903.1 mouse_genomes_project 19 720730 734754 + MGP_WSBEiJ_P0049322 Unc93b1 protein_coding protein_coding MGP_WSBEiJ_T0049323.1 MGP_WSBEiJ_G0023903.1 mouse_genomes_project 19 720770 722289 + Unc93b1 protein_coding retained_intron MGP_WSBEiJ_T0049324.1 MGP_WSBEiJ_G0023903.1 mouse_genomes_project 19 727855 734755 + Unc93b1 protein_coding retained_intron MGP_WSBEiJ_T0050895.1 MGP_WSBEiJ_G0024449.1 mouse_genomes_project 19 44029924 44040218 + MGP_WSBEiJ_P0050895 Sfxn3 protein_coding protein_coding MGP_WSBEiJ_T0050896.1 MGP_WSBEiJ_G0024449.1 mouse_genomes_project 19 44029924 44040218 + MGP_WSBEiJ_P0050896 Sfxn3 protein_coding protein_coding MGP_WSBEiJ_T0050897.1 MGP_WSBEiJ_G0024449.1 mouse_genomes_project 19 44029924 44040218 + MGP_WSBEiJ_P0050897 Sfxn3 protein_coding protein_coding MGP_WSBEiJ_T0050457.1 MGP_WSBEiJ_G0024292.1 mouse_genomes_project 19 27494312 27554706 + MGP_WSBEiJ_P0050457 Pdcd1lg2 protein_coding protein_coding MGP_WSBEiJ_T0050555.1 MGP_WSBEiJ_G0024330.1 mouse_genomes_project 19 33005927 33032355 - MGP_WSBEiJ_P0050555 Ifit1bl2 protein_coding protein_coding MGP_WSBEiJ_T0049642.1 MGP_WSBEiJ_G0024009.1 mouse_genomes_project 19 3047227 3048508 + MGP_WSBEiJ_P0049642 Znhit2 protein_coding protein_coding MGP_WSBEiJ_T0051012.1 MGP_WSBEiJ_G0024482.1 mouse_genomes_project 19 45836651 45879239 + MGP_WSBEiJ_P0051012 As3mt protein_coding protein_coding MGP_WSBEiJ_T0050496.1 MGP_WSBEiJ_G0024303.1 mouse_genomes_project 19 28699251 28703046 - MGP_WSBEiJ_P0050496 Dkk1 protein_coding protein_coding MGP_WSBEiJ_T0050790.1 MGP_WSBEiJ_G0024413.1 mouse_genomes_project 19 41418082 41436798 - MGP_WSBEiJ_P0050790 Loxl4 protein_coding protein_coding MGP_WSBEiJ_T0050791.1 MGP_WSBEiJ_G0024413.1 mouse_genomes_project 19 41419206 41436798 - MGP_WSBEiJ_P0050791 Loxl4 protein_coding protein_coding MGP_WSBEiJ_T0050792.1 MGP_WSBEiJ_G0024413.1 mouse_genomes_project 19 41419434 41432610 - MGP_WSBEiJ_P0050792 Loxl4 protein_coding protein_coding MGP_WSBEiJ_T0050793.1 MGP_WSBEiJ_G0024413.1 mouse_genomes_project 19 41425653 41427432 - Loxl4 protein_coding processed_transcript MGP_WSBEiJ_T0050794.1 MGP_WSBEiJ_G0024413.1 mouse_genomes_project 19 41431708 41436757 - MGP_WSBEiJ_P0050794 Loxl4 protein_coding protein_coding MGP_WSBEiJ_T0049264.1 MGP_WSBEiJ_G0023893.1 mouse_genomes_project 19 141499 150773 + MGP_WSBEiJ_P0049264 Mtl5 protein_coding protein_coding MGP_WSBEiJ_T0049265.1 MGP_WSBEiJ_G0023893.1 mouse_genomes_project 19 141564 160404 + MGP_WSBEiJ_P0049265 Mtl5 protein_coding protein_coding MGP_WSBEiJ_T0049437.1 MGP_WSBEiJ_G0023931.1 mouse_genomes_project 19 1261982 1276945 - MGP_WSBEiJ_P0049437 Rhod protein_coding protein_coding MGP_WSBEiJ_T0049438.1 MGP_WSBEiJ_G0023931.1 mouse_genomes_project 19 1262190 1276934 - MGP_WSBEiJ_P0049438 Rhod protein_coding protein_coding MGP_WSBEiJ_T0049439.1 MGP_WSBEiJ_G0023931.1 mouse_genomes_project 19 1262750 1263079 - Rhod protein_coding processed_transcript MGP_WSBEiJ_T0049499.1 MGP_WSBEiJ_G0023958.1 mouse_genomes_project 19 1952116 1953388 - Tmem151a protein_coding processed_transcript MGP_WSBEiJ_T0049500.1 MGP_WSBEiJ_G0023958.1 mouse_genomes_project 19 1952292 1970112 - MGP_WSBEiJ_P0049500 Tmem151a protein_coding protein_coding MGP_WSBEiJ_T0049501.1 MGP_WSBEiJ_G0023958.1 mouse_genomes_project 19 1953110 1970112 - MGP_WSBEiJ_P0049501 Tmem151a protein_coding protein_coding MGP_WSBEiJ_T0049502.1 MGP_WSBEiJ_G0023958.1 mouse_genomes_project 19 1961813 1970156 - MGP_WSBEiJ_P0049502 Tmem151a protein_coding protein_coding MGP_WSBEiJ_T0049503.1 MGP_WSBEiJ_G0023958.1 mouse_genomes_project 19 1965385 1969506 - Tmem151a protein_coding processed_transcript MGP_WSBEiJ_T0050317.1 MGP_WSBEiJ_G0024244.1 mouse_genomes_project 19 18357717 18400255 - MGP_WSBEiJ_P0050317 Aldh1a7 protein_coding protein_coding MGP_WSBEiJ_T0049669.1 MGP_WSBEiJ_G0024013.1 mouse_genomes_project 19 3065880 3066633 + MGP_WSBEiJ_P0049669 Tmem262 protein_coding protein_coding MGP_WSBEiJ_T0049670.1 MGP_WSBEiJ_G0024013.1 mouse_genomes_project 19 3065880 3066636 + MGP_WSBEiJ_P0049670 Tmem262 protein_coding protein_coding MGP_WSBEiJ_T0050319.1 MGP_WSBEiJ_G0024246.1 mouse_genomes_project 19 18960350 18968695 + MGP_WSBEiJ_P0050319 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050320.1 MGP_WSBEiJ_G0024246.1 mouse_genomes_project 19 18960810 18968557 + MGP_WSBEiJ_P0050320 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050321.1 MGP_WSBEiJ_G0024246.1 mouse_genomes_project 19 18961369 18965162 + MGP_WSBEiJ_P0050321 protein_coding protein_coding MGP_WSBEiJ_T0050322.1 MGP_WSBEiJ_G0024246.1 mouse_genomes_project 19 18964103 18968788 + protein_coding retained_intron MGP_WSBEiJ_T0050323.1 MGP_WSBEiJ_G0024246.1 mouse_genomes_project 19 18964163 18969095 + protein_coding retained_intron MGP_WSBEiJ_T0050074.1 MGP_WSBEiJ_G0024124.1 mouse_genomes_project 19 7710797 7736435 + MGP_WSBEiJ_P0050074 Vps37c protein_coding protein_coding MGP_WSBEiJ_T0050735.1 MGP_WSBEiJ_G0024394.1 mouse_genomes_project 19 40640887 40643043 - MGP_WSBEiJ_P0050735 Frat2 protein_coding protein_coding MGP_WSBEiJ_T0049885.1 MGP_WSBEiJ_G0024061.1 mouse_genomes_project 19 4396429 4458579 - MGP_WSBEiJ_P0049885 Rtn3 protein_coding protein_coding MGP_WSBEiJ_T0049886.1 MGP_WSBEiJ_G0024061.1 mouse_genomes_project 19 4396429 4458579 - MGP_WSBEiJ_P0049886 Rtn3 protein_coding protein_coding MGP_WSBEiJ_T0049887.1 MGP_WSBEiJ_G0024061.1 mouse_genomes_project 19 4396429 4458571 - MGP_WSBEiJ_P0049887 Rtn3 protein_coding protein_coding MGP_WSBEiJ_T0049888.1 MGP_WSBEiJ_G0024061.1 mouse_genomes_project 19 4397555 4458509 - MGP_WSBEiJ_P0049888 Rtn3 protein_coding protein_coding MGP_WSBEiJ_T0050819.1 MGP_WSBEiJ_G0024422.1 mouse_genomes_project 19 42626296 42649632 - MGP_WSBEiJ_P0050819 Cox15 protein_coding protein_coding MGP_WSBEiJ_T0050820.1 MGP_WSBEiJ_G0024422.1 mouse_genomes_project 19 42631080 42635003 - Cox15 protein_coding retained_intron MGP_WSBEiJ_T0017121.1 MGP_WSBEiJ_G0014806.1 mouse_genomes_project 19 24720499 24777754 - 4931403E22Rik processed_transcript processed_transcript MGP_WSBEiJ_T0050821.1 MGP_WSBEiJ_G0024423.1 mouse_genomes_project 19 42649627 42665261 + MGP_WSBEiJ_P0050821 Cutc protein_coding protein_coding MGP_WSBEiJ_T0050822.1 MGP_WSBEiJ_G0024423.1 mouse_genomes_project 19 42649729 42665268 + MGP_WSBEiJ_P0050822 Cutc protein_coding protein_coding MGP_WSBEiJ_T0050823.1 MGP_WSBEiJ_G0024423.1 mouse_genomes_project 19 42649768 42664868 + MGP_WSBEiJ_P0050823 Cutc protein_coding protein_coding MGP_WSBEiJ_T0050824.1 MGP_WSBEiJ_G0024423.1 mouse_genomes_project 19 42661502 42665268 + Cutc protein_coding retained_intron MGP_WSBEiJ_T0098078.1 MGP_WSBEiJ_G0036741.1 mouse_genomes_project 19 46912566 46912670 - Gm24805 snRNA snRNA MGP_WSBEiJ_T0050549.1 MGP_WSBEiJ_G0024326.1 mouse_genomes_project 19 32929795 32954245 + MGP_WSBEiJ_P0050549 Ifit2 protein_coding protein_coding MGP_WSBEiJ_T0050550.1 MGP_WSBEiJ_G0024326.1 mouse_genomes_project 19 32929811 32957472 + MGP_WSBEiJ_P0050550 Ifit2 protein_coding protein_coding MGP_WSBEiJ_T0050318.1 MGP_WSBEiJ_G0024245.1 mouse_genomes_project 19 18443644 18623436 - MGP_WSBEiJ_P0050318 Tmc1 protein_coding protein_coding MGP_WSBEiJ_T0050615.1 MGP_WSBEiJ_G0024348.1 mouse_genomes_project 19 36005428 36010323 + MGP_WSBEiJ_P0050615 Hhex protein_coding protein_coding MGP_WSBEiJ_T0050060.1 MGP_WSBEiJ_G0024116.1 mouse_genomes_project 19 7525445 7548587 + MGP_WSBEiJ_P0050060 Cpsf7 protein_coding protein_coding MGP_WSBEiJ_T0017084.1 MGP_WSBEiJ_G0014796.1 mouse_genomes_project 19 2740627 2741615 + Gm20417 processed_transcript processed_transcript MGP_WSBEiJ_T0051029.1 MGP_WSBEiJ_G0024494.1 mouse_genomes_project 19 46354977 46441222 + MGP_WSBEiJ_P0051029 Neurl1a protein_coding protein_coding MGP_WSBEiJ_T0051030.1 MGP_WSBEiJ_G0024494.1 mouse_genomes_project 19 46407595 46441222 + MGP_WSBEiJ_P0051030 Neurl1a protein_coding protein_coding MGP_WSBEiJ_T0050961.1 MGP_WSBEiJ_G0024466.1 mouse_genomes_project 19 45208570 45211973 + MGP_WSBEiJ_P0050961 Elovl3 protein_coding protein_coding MGP_WSBEiJ_T0050227.1 MGP_WSBEiJ_G0024190.1 mouse_genomes_project 19 9915063 9917036 - MGP_WSBEiJ_P0050227 Cntf protein_coding protein_coding MGP_WSBEiJ_T0050938.1 MGP_WSBEiJ_G0024462.1 mouse_genomes_project 19 45067175 45069871 + MGP_WSBEiJ_P0050938 Hps6 protein_coding protein_coding MGP_WSBEiJ_T0049325.1 MGP_WSBEiJ_G0023904.1 mouse_genomes_project 19 745386 765157 + MGP_WSBEiJ_P0049325 protein_coding protein_coding MGP_WSBEiJ_T0049326.1 MGP_WSBEiJ_G0023904.1 mouse_genomes_project 19 745547 765156 + MGP_WSBEiJ_P0049326 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049327.1 MGP_WSBEiJ_G0023904.1 mouse_genomes_project 19 756692 763280 + MGP_WSBEiJ_P0049327 protein_coding protein_coding MGP_WSBEiJ_T0000985.1 MGP_WSBEiJ_G0000920.1 mouse_genomes_project 19 1614089 1617158 - TEC TEC MGP_WSBEiJ_T0003778.1 MGP_WSBEiJ_G0003385.1 mouse_genomes_project 19 4249521 4256397 + Gm17227 antisense antisense MGP_WSBEiJ_T0003779.1 MGP_WSBEiJ_G0003385.1 mouse_genomes_project 19 4249597 4256219 + Gm17227 antisense antisense MGP_WSBEiJ_T0010120.1 MGP_WSBEiJ_G0008277.1 mouse_genomes_project 19 3033084 3033143 + Mir6988 miRNA miRNA MGP_WSBEiJ_T0049596.1 MGP_WSBEiJ_G0023994.1 mouse_genomes_project 19 2664964 2666531 - MGP_WSBEiJ_P0049596 Fam89b protein_coding protein_coding MGP_WSBEiJ_T0049597.1 MGP_WSBEiJ_G0023994.1 mouse_genomes_project 19 2664964 2666511 - MGP_WSBEiJ_P0049597 Fam89b protein_coding protein_coding MGP_WSBEiJ_T0049598.1 MGP_WSBEiJ_G0023994.1 mouse_genomes_project 19 2664964 2666529 - MGP_WSBEiJ_P0049598 Fam89b protein_coding protein_coding MGP_WSBEiJ_T0050479.1 MGP_WSBEiJ_G0024298.1 mouse_genomes_project 19 28020068 28058754 + MGP_WSBEiJ_P0050479 Il33 protein_coding protein_coding MGP_WSBEiJ_T0050480.1 MGP_WSBEiJ_G0024298.1 mouse_genomes_project 19 28020069 28049487 + MGP_WSBEiJ_P0050480 Il33 protein_coding protein_coding MGP_WSBEiJ_T0050481.1 MGP_WSBEiJ_G0024298.1 mouse_genomes_project 19 28020086 28057009 + MGP_WSBEiJ_P0050481 Il33 protein_coding protein_coding MGP_WSBEiJ_T0050482.1 MGP_WSBEiJ_G0024298.1 mouse_genomes_project 19 28043202 28058740 + MGP_WSBEiJ_P0050482 Il33 protein_coding protein_coding MGP_WSBEiJ_T0050483.1 MGP_WSBEiJ_G0024298.1 mouse_genomes_project 19 28049225 28050213 + MGP_WSBEiJ_P0050483 Il33 protein_coding protein_coding MGP_WSBEiJ_T0050234.1 MGP_WSBEiJ_G0024195.1 mouse_genomes_project 19 10064717 10065820 - MGP_WSBEiJ_P0050234 Olfr1447 protein_coding protein_coding MGP_WSBEiJ_T0050685.1 MGP_WSBEiJ_G0024378.1 mouse_genomes_project 19 39308851 39348709 - MGP_WSBEiJ_P0050685 Aldh18a1 protein_coding protein_coding MGP_WSBEiJ_T0050686.1 MGP_WSBEiJ_G0024378.1 mouse_genomes_project 19 39308851 39348615 - MGP_WSBEiJ_P0050686 Aldh18a1 protein_coding protein_coding MGP_WSBEiJ_T0050687.1 MGP_WSBEiJ_G0024378.1 mouse_genomes_project 19 39309750 39313506 - Aldh18a1 protein_coding retained_intron MGP_WSBEiJ_T0050688.1 MGP_WSBEiJ_G0024378.1 mouse_genomes_project 19 39312000 39313384 - MGP_WSBEiJ_P0050688 Aldh18a1 protein_coding protein_coding MGP_WSBEiJ_T0050689.1 MGP_WSBEiJ_G0024378.1 mouse_genomes_project 19 39315732 39348669 - Aldh18a1 protein_coding retained_intron MGP_WSBEiJ_T0050690.1 MGP_WSBEiJ_G0024378.1 mouse_genomes_project 19 39333153 39348630 - MGP_WSBEiJ_P0050690 Aldh18a1 protein_coding protein_coding MGP_WSBEiJ_T0050691.1 MGP_WSBEiJ_G0024378.1 mouse_genomes_project 19 39337486 39348656 - MGP_WSBEiJ_P0050691 Aldh18a1 protein_coding protein_coding MGP_WSBEiJ_T0050692.1 MGP_WSBEiJ_G0024378.1 mouse_genomes_project 19 39337529 39348628 - MGP_WSBEiJ_P0050692 Aldh18a1 protein_coding protein_coding MGP_WSBEiJ_T0049518.1 MGP_WSBEiJ_G0023965.1 mouse_genomes_project 19 2205458 2217087 + MGP_WSBEiJ_P0049518 Gal3st3 protein_coding protein_coding MGP_WSBEiJ_T0000987.1 MGP_WSBEiJ_G0000922.1 mouse_genomes_project 19 8622682 8624214 - TEC TEC MGP_WSBEiJ_T0049492.1 MGP_WSBEiJ_G0023952.1 mouse_genomes_project 19 1865063 1870680 - MGP_WSBEiJ_P0049492 Npas4 protein_coding protein_coding MGP_WSBEiJ_T0050845.1 MGP_WSBEiJ_G0024429.1 mouse_genomes_project 19 42987404 43022259 - MGP_WSBEiJ_P0050845 Chuk protein_coding protein_coding MGP_WSBEiJ_T0050846.1 MGP_WSBEiJ_G0024429.1 mouse_genomes_project 19 42987405 43022256 - MGP_WSBEiJ_P0050846 Chuk protein_coding protein_coding MGP_WSBEiJ_T0050847.1 MGP_WSBEiJ_G0024429.1 mouse_genomes_project 19 42988442 42989974 - Chuk protein_coding retained_intron MGP_WSBEiJ_T0050848.1 MGP_WSBEiJ_G0024429.1 mouse_genomes_project 19 42991007 42993139 - Chuk protein_coding retained_intron MGP_WSBEiJ_T0050849.1 MGP_WSBEiJ_G0024429.1 mouse_genomes_project 19 42991357 42998548 - Chuk protein_coding retained_intron MGP_WSBEiJ_T0050850.1 MGP_WSBEiJ_G0024429.1 mouse_genomes_project 19 42992389 42993386 - Chuk protein_coding retained_intron MGP_WSBEiJ_T0050851.1 MGP_WSBEiJ_G0024429.1 mouse_genomes_project 19 42995546 43022248 - Chuk protein_coding retained_intron MGP_WSBEiJ_T0050852.1 MGP_WSBEiJ_G0024429.1 mouse_genomes_project 19 43012151 43022061 - Chuk protein_coding retained_intron MGP_WSBEiJ_T0099318.1 MGP_WSBEiJ_G0037981.1 mouse_genomes_project 19 36669218 36669343 + Gm23300 snoRNA snoRNA MGP_WSBEiJ_T0050616.1 MGP_WSBEiJ_G0024349.1 mouse_genomes_project 19 36133008 36265140 + MGP_WSBEiJ_P0050616 Exoc6 protein_coding protein_coding MGP_WSBEiJ_T0050292.1 MGP_WSBEiJ_G0024236.1 mouse_genomes_project 19 16127870 16182308 - MGP_WSBEiJ_P0050292 Ostf1 protein_coding protein_coding MGP_WSBEiJ_T0050293.1 MGP_WSBEiJ_G0024236.1 mouse_genomes_project 19 16129534 16182259 - Ostf1 protein_coding retained_intron MGP_WSBEiJ_T0050294.1 MGP_WSBEiJ_G0024236.1 mouse_genomes_project 19 16142907 16182237 - Ostf1 protein_coding retained_intron MGP_WSBEiJ_T0017115.1 MGP_WSBEiJ_G0014803.1 mouse_genomes_project 19 8502707 8516643 - BE692007 processed_transcript antisense MGP_WSBEiJ_T0017116.1 MGP_WSBEiJ_G0014803.1 mouse_genomes_project 19 8512254 8516644 - BE692007 processed_transcript antisense MGP_WSBEiJ_T0017117.1 MGP_WSBEiJ_G0014803.1 mouse_genomes_project 19 8512372 8516601 - BE692007 processed_transcript retained_intron MGP_WSBEiJ_T0003764.1 MGP_WSBEiJ_G0003378.1 mouse_genomes_project 19 1656618 1660890 + Gm21844 antisense antisense MGP_WSBEiJ_T0049257.1 MGP_WSBEiJ_G0023891.1 mouse_genomes_project 19 27108 37051 + MGP_WSBEiJ_P0049257 Mrpl21 protein_coding protein_coding MGP_WSBEiJ_T0049258.1 MGP_WSBEiJ_G0023891.1 mouse_genomes_project 19 27262 33393 + Mrpl21 protein_coding retained_intron MGP_WSBEiJ_T0049259.1 MGP_WSBEiJ_G0023891.1 mouse_genomes_project 19 27267 29528 + Mrpl21 protein_coding retained_intron MGP_WSBEiJ_T0049260.1 MGP_WSBEiJ_G0023891.1 mouse_genomes_project 19 27267 35415 + MGP_WSBEiJ_P0049260 Mrpl21 protein_coding protein_coding MGP_WSBEiJ_T0049261.1 MGP_WSBEiJ_G0023891.1 mouse_genomes_project 19 27271 31942 + MGP_WSBEiJ_P0049261 Mrpl21 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049262.1 MGP_WSBEiJ_G0023891.1 mouse_genomes_project 19 31013 35409 + Mrpl21 protein_coding retained_intron MGP_WSBEiJ_T0050638.1 MGP_WSBEiJ_G0024360.1 mouse_genomes_project 19 37111123 37154211 + Plce1 protein_coding processed_transcript MGP_WSBEiJ_T0050639.1 MGP_WSBEiJ_G0024360.1 mouse_genomes_project 19 37111135 37439841 + MGP_WSBEiJ_P0050639 Plce1 protein_coding protein_coding MGP_WSBEiJ_T0050640.1 MGP_WSBEiJ_G0024360.1 mouse_genomes_project 19 37154341 37441471 + MGP_WSBEiJ_P0050640 Plce1 protein_coding protein_coding MGP_WSBEiJ_T0050641.1 MGP_WSBEiJ_G0024360.1 mouse_genomes_project 19 37154353 37439206 + MGP_WSBEiJ_P0050641 Plce1 protein_coding protein_coding MGP_WSBEiJ_T0050642.1 MGP_WSBEiJ_G0024360.1 mouse_genomes_project 19 37219917 37292087 + MGP_WSBEiJ_P0050642 Plce1 protein_coding protein_coding MGP_WSBEiJ_T0050643.1 MGP_WSBEiJ_G0024360.1 mouse_genomes_project 19 37369632 37439999 + Plce1 protein_coding retained_intron MGP_WSBEiJ_T0050644.1 MGP_WSBEiJ_G0024360.1 mouse_genomes_project 19 37383181 37399444 + Plce1 protein_coding retained_intron MGP_WSBEiJ_T0050666.1 MGP_WSBEiJ_G0024372.1 mouse_genomes_project 19 38669489 38694309 + MGP_WSBEiJ_P0050666 Cyp2c37 protein_coding protein_coding MGP_WSBEiJ_T0049507.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 1992957 2005043 - MGP_WSBEiJ_P0049507 Klc2 protein_coding protein_coding MGP_WSBEiJ_T0049508.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 1992957 2004783 - MGP_WSBEiJ_P0049508 Klc2 protein_coding protein_coding MGP_WSBEiJ_T0049509.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 1992957 2004780 - MGP_WSBEiJ_P0049509 Klc2 protein_coding protein_coding MGP_WSBEiJ_T0049510.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 1992959 2004781 - MGP_WSBEiJ_P0049510 Klc2 protein_coding protein_coding MGP_WSBEiJ_T0049511.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 1994678 1996007 - Klc2 protein_coding retained_intron MGP_WSBEiJ_T0049512.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 1995953 1997975 - Klc2 protein_coding retained_intron MGP_WSBEiJ_T0049513.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 1996896 1998514 - Klc2 protein_coding retained_intron MGP_WSBEiJ_T0049514.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 2000039 2000540 - Klc2 protein_coding retained_intron MGP_WSBEiJ_T0049515.1 MGP_WSBEiJ_G0023962.1 mouse_genomes_project 19 2000339 2004069 - MGP_WSBEiJ_P0049515 Klc2 protein_coding protein_coding MGP_WSBEiJ_T0049263.1 MGP_WSBEiJ_G0023892.1 mouse_genomes_project 19 71453 138127 + MGP_WSBEiJ_P0049263 Cpt1a protein_coding protein_coding MGP_WSBEiJ_T0017088.1 MGP_WSBEiJ_G0014799.1 mouse_genomes_project 19 3631743 3698554 - 2410152P15Rik processed_transcript processed_transcript MGP_WSBEiJ_T0050061.1 MGP_WSBEiJ_G0024117.1 mouse_genomes_project 19 7533223 7556716 - MGP_WSBEiJ_P0050061 Tmem216 protein_coding protein_coding MGP_WSBEiJ_T0050062.1 MGP_WSBEiJ_G0024117.1 mouse_genomes_project 19 7538743 7556731 - MGP_WSBEiJ_P0050062 Tmem216 protein_coding protein_coding MGP_WSBEiJ_T0050063.1 MGP_WSBEiJ_G0024117.1 mouse_genomes_project 19 7551324 7557217 - MGP_WSBEiJ_P0050063 Tmem216 protein_coding protein_coding MGP_WSBEiJ_T0050064.1 MGP_WSBEiJ_G0024117.1 mouse_genomes_project 19 7551355 7556731 - MGP_WSBEiJ_P0050064 Tmem216 protein_coding protein_coding MGP_WSBEiJ_T0050065.1 MGP_WSBEiJ_G0024117.1 mouse_genomes_project 19 7551413 7556731 - MGP_WSBEiJ_P0050065 Tmem216 protein_coding protein_coding MGP_WSBEiJ_T0050066.1 MGP_WSBEiJ_G0024117.1 mouse_genomes_project 19 7555726 7556731 - Tmem216 protein_coding retained_intron MGP_WSBEiJ_T0050130.1 MGP_WSBEiJ_G0024143.1 mouse_genomes_project 19 8322013 8328755 - Ms4a5 protein_coding retained_intron MGP_WSBEiJ_T0050131.1 MGP_WSBEiJ_G0024143.1 mouse_genomes_project 19 8322641 8333136 - MGP_WSBEiJ_P0050131 Ms4a5 protein_coding protein_coding MGP_WSBEiJ_T0050132.1 MGP_WSBEiJ_G0024143.1 mouse_genomes_project 19 8322641 8333196 - MGP_WSBEiJ_P0050132 Ms4a5 protein_coding protein_coding MGP_WSBEiJ_T0050133.1 MGP_WSBEiJ_G0024143.1 mouse_genomes_project 19 8322938 8328970 - Ms4a5 protein_coding processed_transcript MGP_WSBEiJ_T0050134.1 MGP_WSBEiJ_G0024143.1 mouse_genomes_project 19 8326078 8333183 - MGP_WSBEiJ_P0050134 Ms4a5 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0017122.1 MGP_WSBEiJ_G0014807.1 mouse_genomes_project 19 26002947 26004444 + Gm20407 processed_transcript processed_transcript MGP_WSBEiJ_T0050987.1 MGP_WSBEiJ_G0024472.1 mouse_genomes_project 19 45412823 45421678 - MGP_WSBEiJ_P0050987 Cuedc2 protein_coding protein_coding MGP_WSBEiJ_T0050988.1 MGP_WSBEiJ_G0024472.1 mouse_genomes_project 19 45412823 45421678 - MGP_WSBEiJ_P0050988 Cuedc2 protein_coding protein_coding MGP_WSBEiJ_T0006962.1 MGP_WSBEiJ_G0005722.1 mouse_genomes_project 19 8067431 8069605 - Gm28347 lincRNA lincRNA MGP_WSBEiJ_T0050506.1 MGP_WSBEiJ_G0024307.1 mouse_genomes_project 19 30171564 30252383 - MGP_WSBEiJ_P0050506 Asah2 protein_coding protein_coding MGP_WSBEiJ_T0050204.1 MGP_WSBEiJ_G0024180.1 mouse_genomes_project 19 9570390 9574595 + MGP_WSBEiJ_P0050204 Pfpl protein_coding protein_coding MGP_WSBEiJ_T0000989.1 MGP_WSBEiJ_G0000924.1 mouse_genomes_project 19 36003467 36005215 - TEC TEC MGP_WSBEiJ_T0051019.1 MGP_WSBEiJ_G0024485.1 mouse_genomes_project 19 46166785 46177676 + MGP_WSBEiJ_P0051019 Ina protein_coding protein_coding MGP_WSBEiJ_T0049408.1 MGP_WSBEiJ_G0023928.1 mouse_genomes_project 19 1095988 1108760 - MGP_WSBEiJ_P0049408 Ankrd13d protein_coding protein_coding MGP_WSBEiJ_T0049409.1 MGP_WSBEiJ_G0023928.1 mouse_genomes_project 19 1095988 1107800 - MGP_WSBEiJ_P0049409 Ankrd13d protein_coding protein_coding MGP_WSBEiJ_T0049410.1 MGP_WSBEiJ_G0023928.1 mouse_genomes_project 19 1095990 1108762 - MGP_WSBEiJ_P0049410 Ankrd13d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049411.1 MGP_WSBEiJ_G0023928.1 mouse_genomes_project 19 1096206 1097103 - MGP_WSBEiJ_P0049411 Ankrd13d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049412.1 MGP_WSBEiJ_G0023928.1 mouse_genomes_project 19 1098429 1106636 - MGP_WSBEiJ_P0049412 Ankrd13d protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049413.1 MGP_WSBEiJ_G0023928.1 mouse_genomes_project 19 1105091 1108762 - Ankrd13d protein_coding processed_transcript MGP_WSBEiJ_T0049414.1 MGP_WSBEiJ_G0023928.1 mouse_genomes_project 19 1106270 1108658 - MGP_WSBEiJ_P0049414 Ankrd13d protein_coding protein_coding MGP_WSBEiJ_T0050924.1 MGP_WSBEiJ_G0024458.1 mouse_genomes_project 19 44781761 44785302 - MGP_WSBEiJ_P0050924 Npm3 protein_coding protein_coding MGP_WSBEiJ_T0050925.1 MGP_WSBEiJ_G0024458.1 mouse_genomes_project 19 44784252 44785260 - Npm3 protein_coding retained_intron MGP_WSBEiJ_T0049386.1 MGP_WSBEiJ_G0023919.1 mouse_genomes_project 19 966245 968368 + MGP_WSBEiJ_P0049386 Ptprcap protein_coding protein_coding MGP_WSBEiJ_T0050782.1 MGP_WSBEiJ_G0024410.1 mouse_genomes_project 19 41070595 41096795 + MGP_WSBEiJ_P0050782 Golga7b protein_coding protein_coding MGP_WSBEiJ_T0050783.1 MGP_WSBEiJ_G0024410.1 mouse_genomes_project 19 41079726 41096795 + MGP_WSBEiJ_P0050783 Golga7b protein_coding protein_coding MGP_WSBEiJ_T0049254.1 MGP_WSBEiJ_G0023890.1 mouse_genomes_project 19 5636 26994 - MGP_WSBEiJ_P0049254 Ighmbp2 protein_coding protein_coding MGP_WSBEiJ_T0049255.1 MGP_WSBEiJ_G0023890.1 mouse_genomes_project 19 9027 27188 - MGP_WSBEiJ_P0049255 Ighmbp2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049256.1 MGP_WSBEiJ_G0023890.1 mouse_genomes_project 19 9573 11924 - Ighmbp2 protein_coding retained_intron MGP_WSBEiJ_T0049703.1 MGP_WSBEiJ_G0024022.1 mouse_genomes_project 19 3221766 3223239 + MGP_WSBEiJ_P0049703 Gpha2 protein_coding protein_coding MGP_WSBEiJ_T0049704.1 MGP_WSBEiJ_G0024022.1 mouse_genomes_project 19 3221774 3223239 + MGP_WSBEiJ_P0049704 Gpha2 protein_coding protein_coding MGP_WSBEiJ_T0051172.1 MGP_WSBEiJ_G0024535.1 mouse_genomes_project 19 56440063 56484338 + MGP_WSBEiJ_P0051172 Tdrd1 protein_coding protein_coding MGP_WSBEiJ_T0051173.1 MGP_WSBEiJ_G0024535.1 mouse_genomes_project 19 56440129 56484338 + MGP_WSBEiJ_P0051173 Tdrd1 protein_coding protein_coding MGP_WSBEiJ_T0051174.1 MGP_WSBEiJ_G0024535.1 mouse_genomes_project 19 56440140 56484338 + MGP_WSBEiJ_P0051174 Tdrd1 protein_coding protein_coding MGP_WSBEiJ_T0051175.1 MGP_WSBEiJ_G0024535.1 mouse_genomes_project 19 56444559 56484338 + MGP_WSBEiJ_P0051175 Tdrd1 protein_coding protein_coding MGP_WSBEiJ_T0050021.1 MGP_WSBEiJ_G0024101.1 mouse_genomes_project 19 6846866 6875840 - MGP_WSBEiJ_P0050021 Incenp protein_coding protein_coding MGP_WSBEiJ_T0050992.1 MGP_WSBEiJ_G0024474.1 mouse_genomes_project 19 45463273 45485244 - MGP_WSBEiJ_P0050992 Actr1a protein_coding protein_coding MGP_WSBEiJ_T0050668.1 MGP_WSBEiJ_G0024374.1 mouse_genomes_project 19 38806893 38828071 + MGP_WSBEiJ_P0050668 Cyp2c50 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050669.1 MGP_WSBEiJ_G0024374.1 mouse_genomes_project 19 38808368 38828065 + MGP_WSBEiJ_P0050669 Cyp2c50 protein_coding protein_coding MGP_WSBEiJ_T0050670.1 MGP_WSBEiJ_G0024374.1 mouse_genomes_project 19 38808473 38810887 + Cyp2c50 protein_coding retained_intron MGP_WSBEiJ_T0010140.1 MGP_WSBEiJ_G0008297.1 mouse_genomes_project 19 32760238 32760347 - Gm23060 miRNA miRNA MGP_WSBEiJ_T0050903.1 MGP_WSBEiJ_G0024453.1 mouse_genomes_project 19 44372964 44546907 + MGP_WSBEiJ_P0050903 Btrc protein_coding protein_coding MGP_WSBEiJ_T0050904.1 MGP_WSBEiJ_G0024453.1 mouse_genomes_project 19 44372964 44546907 + MGP_WSBEiJ_P0050904 Btrc protein_coding protein_coding MGP_WSBEiJ_T0050905.1 MGP_WSBEiJ_G0024453.1 mouse_genomes_project 19 44373069 44543786 + MGP_WSBEiJ_P0050905 Btrc protein_coding unknown_likely_coding MGP_WSBEiJ_T0050025.1 MGP_WSBEiJ_G0024104.1 mouse_genomes_project 19 6983339 7017479 + MGP_WSBEiJ_P0050025 Rab3il1 protein_coding protein_coding MGP_WSBEiJ_T0050026.1 MGP_WSBEiJ_G0024104.1 mouse_genomes_project 19 6996919 7009469 + MGP_WSBEiJ_P0050026 Rab3il1 protein_coding protein_coding MGP_WSBEiJ_T0050027.1 MGP_WSBEiJ_G0024104.1 mouse_genomes_project 19 6996947 7009370 + MGP_WSBEiJ_P0050027 Rab3il1 protein_coding protein_coding MGP_WSBEiJ_T0050028.1 MGP_WSBEiJ_G0024104.1 mouse_genomes_project 19 7000097 7017349 + MGP_WSBEiJ_P0050028 Rab3il1 protein_coding protein_coding MGP_WSBEiJ_T0050029.1 MGP_WSBEiJ_G0024104.1 mouse_genomes_project 19 7000098 7017348 + MGP_WSBEiJ_P0050029 Rab3il1 protein_coding protein_coding MGP_WSBEiJ_T0050030.1 MGP_WSBEiJ_G0024104.1 mouse_genomes_project 19 7000098 7020290 + MGP_WSBEiJ_P0050030 Rab3il1 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050031.1 MGP_WSBEiJ_G0024104.1 mouse_genomes_project 19 7000169 7010201 + MGP_WSBEiJ_P0050031 Rab3il1 protein_coding protein_coding MGP_WSBEiJ_T0050032.1 MGP_WSBEiJ_G0024104.1 mouse_genomes_project 19 7013562 7015703 + Rab3il1 protein_coding retained_intron MGP_WSBEiJ_T0050344.1 MGP_WSBEiJ_G0024253.1 mouse_genomes_project 19 20887573 20915739 + MGP_WSBEiJ_P0050344 Klf9 protein_coding protein_coding MGP_WSBEiJ_T0098061.1 MGP_WSBEiJ_G0036724.1 mouse_genomes_project 19 4194582 4194686 + Gm22113 snRNA snRNA MGP_WSBEiJ_T0050557.1 MGP_WSBEiJ_G0024332.1 mouse_genomes_project 19 33060061 33145984 - MGP_WSBEiJ_P0050557 Slc16a12 protein_coding protein_coding MGP_WSBEiJ_T0049537.1 MGP_WSBEiJ_G0023976.1 mouse_genomes_project 19 2381894 2386345 + MGP_WSBEiJ_P0049537 Fibp protein_coding protein_coding MGP_WSBEiJ_T0049538.1 MGP_WSBEiJ_G0023976.1 mouse_genomes_project 19 2381981 2386350 + MGP_WSBEiJ_P0049538 Fibp protein_coding unknown_likely_coding MGP_WSBEiJ_T0050523.1 MGP_WSBEiJ_G0024311.1 mouse_genomes_project 19 30885518 30929832 - MGP_WSBEiJ_P0050523 Atad1 protein_coding protein_coding MGP_WSBEiJ_T0050737.1 MGP_WSBEiJ_G0024396.1 mouse_genomes_project 19 40711503 40719023 + MGP_WSBEiJ_P0050737 Pgam1 protein_coding protein_coding MGP_WSBEiJ_T0050246.1 MGP_WSBEiJ_G0024207.1 mouse_genomes_project 19 10486507 10487431 - MGP_WSBEiJ_P0050246 Olfr1465 protein_coding protein_coding MGP_WSBEiJ_T0050867.1 MGP_WSBEiJ_G0024439.1 mouse_genomes_project 19 43481501 43491644 - MGP_WSBEiJ_P0050867 Gm20538 protein_coding protein_coding MGP_WSBEiJ_T0049626.1 MGP_WSBEiJ_G0024003.1 mouse_genomes_project 19 2938651 2955788 - MGP_WSBEiJ_P0049626 Slc22a20 protein_coding protein_coding MGP_WSBEiJ_T0099306.1 MGP_WSBEiJ_G0037969.1 mouse_genomes_project 19 5953658 5953806 - Snora57 snoRNA snoRNA MGP_WSBEiJ_T0050721.1 MGP_WSBEiJ_G0024388.1 mouse_genomes_project 19 40061279 40177342 - MGP_WSBEiJ_P0050721 Pik3ap1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0051021.1 MGP_WSBEiJ_G0024487.1 mouse_genomes_project 19 46221794 46239533 + MGP_WSBEiJ_P0051021 Taf5 protein_coding protein_coding MGP_WSBEiJ_T0050902.1 MGP_WSBEiJ_G0024452.1 mouse_genomes_project 19 44228228 44231357 - MGP_WSBEiJ_P0050902 Lbx1 protein_coding protein_coding MGP_WSBEiJ_T0050781.1 MGP_WSBEiJ_G0024409.1 mouse_genomes_project 19 41016291 41020604 - MGP_WSBEiJ_P0050781 Sfrp5 protein_coding protein_coding MGP_WSBEiJ_T0049999.1 MGP_WSBEiJ_G0024091.1 mouse_genomes_project 19 5986385 5993194 + MGP_WSBEiJ_P0049999 B3gat3 protein_coding protein_coding MGP_WSBEiJ_T0006965.1 MGP_WSBEiJ_G0005725.1 mouse_genomes_project 19 8497913 8499555 + Gm37387 lincRNA lincRNA MGP_WSBEiJ_T0049591.1 MGP_WSBEiJ_G0023990.1 mouse_genomes_project 19 2624777 2638490 + MGP_WSBEiJ_P0049591 Map3k11 protein_coding protein_coding MGP_WSBEiJ_T0050194.1 MGP_WSBEiJ_G0024170.1 mouse_genomes_project 19 9190671 9191609 - MGP_WSBEiJ_P0050194 Olfr1427 protein_coding protein_coding MGP_WSBEiJ_T0050127.1 MGP_WSBEiJ_G0024142.1 mouse_genomes_project 19 8286924 8309529 - MGP_WSBEiJ_P0050127 Ms4a1 protein_coding protein_coding MGP_WSBEiJ_T0050128.1 MGP_WSBEiJ_G0024142.1 mouse_genomes_project 19 8288126 8291945 - Ms4a1 protein_coding retained_intron MGP_WSBEiJ_T0050129.1 MGP_WSBEiJ_G0024142.1 mouse_genomes_project 19 8291250 8309433 - Ms4a1 protein_coding retained_intron MGP_WSBEiJ_T0050105.1 MGP_WSBEiJ_G0024132.1 mouse_genomes_project 19 7972342 7978654 + MGP_WSBEiJ_P0050105 Ptgdr2 protein_coding protein_coding MGP_WSBEiJ_T0006994.1 MGP_WSBEiJ_G0005745.1 mouse_genomes_project 19 44317983 44318931 - Gm29593 lincRNA lincRNA MGP_WSBEiJ_T0050862.1 MGP_WSBEiJ_G0024436.1 mouse_genomes_project 19 43315375 43329083 - MGP_WSBEiJ_P0050862 Scd1 protein_coding protein_coding MGP_WSBEiJ_T0050497.1 MGP_WSBEiJ_G0024304.1 mouse_genomes_project 19 28721630 29954865 - MGP_WSBEiJ_P0050497 Prkg1 protein_coding protein_coding MGP_WSBEiJ_T0050498.1 MGP_WSBEiJ_G0024304.1 mouse_genomes_project 19 28722626 29861836 - MGP_WSBEiJ_P0050498 Prkg1 protein_coding protein_coding MGP_WSBEiJ_T0050499.1 MGP_WSBEiJ_G0024304.1 mouse_genomes_project 19 28723040 28728898 - Prkg1 protein_coding processed_transcript MGP_WSBEiJ_T0050500.1 MGP_WSBEiJ_G0024304.1 mouse_genomes_project 19 28723042 28728898 - Prkg1 protein_coding processed_transcript MGP_WSBEiJ_T0050501.1 MGP_WSBEiJ_G0024304.1 mouse_genomes_project 19 28773604 28779750 - Prkg1 protein_coding processed_transcript MGP_WSBEiJ_T0050502.1 MGP_WSBEiJ_G0024304.1 mouse_genomes_project 19 28859631 28932751 - Prkg1 protein_coding retained_intron MGP_WSBEiJ_T0050504.1 MGP_WSBEiJ_G0024304.1 mouse_genomes_project 19 29930961 29954805 - MGP_WSBEiJ_P0050504 Prkg1 protein_coding protein_coding MGP_WSBEiJ_T0017089.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5769727 5773566 + Snhg1 processed_transcript lincRNA MGP_WSBEiJ_T0017090.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5769739 5773565 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017091.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5769739 5773564 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017092.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771127 5773566 + Snhg1 processed_transcript lincRNA MGP_WSBEiJ_T0017093.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771253 5773015 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017094.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771262 5771975 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017095.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771269 5773468 + Snhg1 processed_transcript lincRNA MGP_WSBEiJ_T0017096.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771280 5773566 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017097.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771284 5772464 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017098.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771478 5772426 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017099.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771515 5772958 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017100.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771525 5772645 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017101.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5771785 5773566 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017102.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5772019 5773566 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017103.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5772144 5773125 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017104.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5772226 5773566 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017105.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5772597 5773566 + Snhg1 processed_transcript retained_intron MGP_WSBEiJ_T0017106.1 MGP_WSBEiJ_G0014800.1 mouse_genomes_project 19 5772622 5773566 + Snhg1 processed_transcript lincRNA MGP_WSBEiJ_T0049964.1 MGP_WSBEiJ_G0024078.1 mouse_genomes_project 19 5848810 5854015 - MGP_WSBEiJ_P0049964 Polr2g protein_coding protein_coding MGP_WSBEiJ_T0051155.1 MGP_WSBEiJ_G0024530.1 mouse_genomes_project 19 56058557 56084859 + MGP_WSBEiJ_P0051155 Plekhs1 protein_coding protein_coding MGP_WSBEiJ_T0051156.1 MGP_WSBEiJ_G0024530.1 mouse_genomes_project 19 56058557 56084859 + MGP_WSBEiJ_P0051156 Plekhs1 protein_coding protein_coding MGP_WSBEiJ_T0051157.1 MGP_WSBEiJ_G0024530.1 mouse_genomes_project 19 56061326 56083979 + MGP_WSBEiJ_P0051157 Plekhs1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0050858.1 MGP_WSBEiJ_G0024433.1 mouse_genomes_project 19 43112582 43148562 + MGP_WSBEiJ_P0050858 Scd3 protein_coding protein_coding MGP_WSBEiJ_T0099314.1 MGP_WSBEiJ_G0037977.1 mouse_genomes_project 19 23039102 23039234 - Gm24252 snoRNA snoRNA MGP_WSBEiJ_T0049493.1 MGP_WSBEiJ_G0023953.1 mouse_genomes_project 19 1903808 1911753 + MGP_WSBEiJ_P0049493 Slc29a2 protein_coding protein_coding MGP_WSBEiJ_T0050653.1 MGP_WSBEiJ_G0024364.1 mouse_genomes_project 19 37684632 37723250 + MGP_WSBEiJ_P0050653 Cyp2c55 protein_coding protein_coding MGP_WSBEiJ_T0011284.1 MGP_WSBEiJ_G0009441.1 mouse_genomes_project 19 40534252 40534497 + Gm22601 misc_RNA misc_RNA MGP_WSBEiJ_T0051107.1 MGP_WSBEiJ_G0024520.1 mouse_genomes_project 19 54597648 54628813 - MGP_WSBEiJ_P0051107 Gpam protein_coding protein_coding MGP_WSBEiJ_T0006989.1 MGP_WSBEiJ_G0005741.1 mouse_genomes_project 19 39640163 39645591 + E030044B06Rik lincRNA lincRNA MGP_WSBEiJ_T0010135.1 MGP_WSBEiJ_G0008292.1 mouse_genomes_project 19 20472830 20472898 + Mir204 miRNA miRNA MGP_WSBEiJ_T0050667.1 MGP_WSBEiJ_G0024373.1 mouse_genomes_project 19 38757448 38790982 - MGP_WSBEiJ_P0050667 Cyp2c54 protein_coding protein_coding MGP_WSBEiJ_T0003763.1 MGP_WSBEiJ_G0003377.1 mouse_genomes_project 19 794670 795145 - Gm16312 antisense antisense MGP_WSBEiJ_T0049275.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539101 583009 + MGP_WSBEiJ_P0049275 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049276.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539101 592481 + MGP_WSBEiJ_P0049276 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049277.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539101 590572 + MGP_WSBEiJ_P0049277 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049278.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539101 592482 + MGP_WSBEiJ_P0049278 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049279.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539101 590572 + MGP_WSBEiJ_P0049279 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049280.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539203 580515 + MGP_WSBEiJ_P0049280 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049281.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539713 583015 + MGP_WSBEiJ_P0049281 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049282.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539798 579247 + MGP_WSBEiJ_P0049282 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049283.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539814 555332 + Suv420h1 protein_coding retained_intron MGP_WSBEiJ_T0049284.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539829 578692 + MGP_WSBEiJ_P0049284 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049285.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539846 590869 + MGP_WSBEiJ_P0049285 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049286.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539849 567478 + MGP_WSBEiJ_P0049286 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049287.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539898 582987 + MGP_WSBEiJ_P0049287 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049288.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 539913 567496 + MGP_WSBEiJ_P0049288 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049289.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 540227 570937 + MGP_WSBEiJ_P0049289 Suv420h1 protein_coding protein_coding MGP_WSBEiJ_T0049290.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 566030 573791 + Suv420h1 protein_coding retained_intron MGP_WSBEiJ_T0049291.1 MGP_WSBEiJ_G0023898.1 mouse_genomes_project 19 578583 581582 + Suv420h1 protein_coding retained_intron MGP_WSBEiJ_T0098071.1 MGP_WSBEiJ_G0036734.1 mouse_genomes_project 19 33195917 33196078 + Gm22082 snRNA snRNA MGP_WSBEiJ_T0010131.1 MGP_WSBEiJ_G0008288.1 mouse_genomes_project 19 7182916 7182981 + Mir6993 miRNA miRNA MGP_WSBEiJ_T0050326.1 MGP_WSBEiJ_G0024248.1 mouse_genomes_project 19 19269379 19271368 + MGP_WSBEiJ_P0050326 Gm3443 protein_coding protein_coding MGP_WSBEiJ_T0099309.1 MGP_WSBEiJ_G0037972.1 mouse_genomes_project 19 10903019 10903151 - Gm24124 snoRNA snoRNA MGP_WSBEiJ_T0051093.1 MGP_WSBEiJ_G0024514.1 mouse_genomes_project 19 53043112 53090317 + MGP_WSBEiJ_P0051093 protein_coding protein_coding MGP_WSBEiJ_T0051094.1 MGP_WSBEiJ_G0024514.1 mouse_genomes_project 19 53077125 53078161 + protein_coding retained_intron MGP_WSBEiJ_T0051095.1 MGP_WSBEiJ_G0024514.1 mouse_genomes_project 19 53085248 53089292 + protein_coding retained_intron MGP_WSBEiJ_T0051069.1 MGP_WSBEiJ_G0024506.1 mouse_genomes_project 19 49433569 49984366 - MGP_WSBEiJ_P0051069 protein_coding protein_coding MGP_WSBEiJ_T0051070.1 MGP_WSBEiJ_G0024506.1 mouse_genomes_project 19 49437928 49984366 - MGP_WSBEiJ_P0051070 protein_coding protein_coding MGP_WSBEiJ_T0051071.1 MGP_WSBEiJ_G0024506.1 mouse_genomes_project 19 49441253 49548771 - MGP_WSBEiJ_P0051071 protein_coding protein_coding MGP_WSBEiJ_T0051072.1 MGP_WSBEiJ_G0024506.1 mouse_genomes_project 19 49442948 49984205 - MGP_WSBEiJ_P0051072 protein_coding protein_coding MGP_WSBEiJ_T0007003.1 MGP_WSBEiJ_G0005751.1 mouse_genomes_project 19 52874852 52900616 - Mirt1 lincRNA lincRNA MGP_WSBEiJ_T0007004.1 MGP_WSBEiJ_G0005751.1 mouse_genomes_project 19 52877597 52882051 - Mirt1 lincRNA lincRNA MGP_WSBEiJ_T0007005.1 MGP_WSBEiJ_G0005751.1 mouse_genomes_project 19 52886387 52888606 - Mirt1 lincRNA lincRNA MGP_WSBEiJ_T0003798.1 MGP_WSBEiJ_G0003399.1 mouse_genomes_project 19 44785218 44789533 + Gm15491 antisense antisense MGP_WSBEiJ_T0049623.1 MGP_WSBEiJ_G0024001.1 mouse_genomes_project 19 2870801 2878061 - MGP_WSBEiJ_P0049623 Cdc42ep2 protein_coding protein_coding MGP_WSBEiJ_T0049535.1 MGP_WSBEiJ_G0023974.1 mouse_genomes_project 19 2368972 2377238 + MGP_WSBEiJ_P0049535 Fosl1 protein_coding protein_coding MGP_WSBEiJ_T0098079.1 MGP_WSBEiJ_G0036742.1 mouse_genomes_project 19 50568791 50568898 - Gm25644 snRNA snRNA MGP_WSBEiJ_T0049913.1 MGP_WSBEiJ_G0024072.1 mouse_genomes_project 19 5753200 5769348 - MGP_WSBEiJ_P0049913 Slc3a2 protein_coding protein_coding MGP_WSBEiJ_T0049914.1 MGP_WSBEiJ_G0024072.1 mouse_genomes_project 19 5754942 5758986 - MGP_WSBEiJ_P0049914 Slc3a2 protein_coding protein_coding MGP_WSBEiJ_T0049915.1 MGP_WSBEiJ_G0024072.1 mouse_genomes_project 19 5755368 5758987 - MGP_WSBEiJ_P0049915 Slc3a2 protein_coding protein_coding MGP_WSBEiJ_T0049916.1 MGP_WSBEiJ_G0024072.1 mouse_genomes_project 19 5755400 5760064 - MGP_WSBEiJ_P0049916 Slc3a2 protein_coding protein_coding MGP_WSBEiJ_T0049917.1 MGP_WSBEiJ_G0024072.1 mouse_genomes_project 19 5758788 5769451 - Slc3a2 protein_coding retained_intron MGP_WSBEiJ_T0049918.1 MGP_WSBEiJ_G0024072.1 mouse_genomes_project 19 5759039 5759727 - MGP_WSBEiJ_P0049918 Slc3a2 protein_coding protein_coding MGP_WSBEiJ_T0049919.1 MGP_WSBEiJ_G0024072.1 mouse_genomes_project 19 5759050 5759814 - MGP_WSBEiJ_P0049919 Slc3a2 protein_coding protein_coding MGP_WSBEiJ_T0100247.1 MGP_WSBEiJ_G0038784.1 mouse_genomes_project 19 37901710 37932887 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0100248.1 MGP_WSBEiJ_G0038784.1 mouse_genomes_project 19 37901740 37932844 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_WSBEiJ_T0100249.1 MGP_WSBEiJ_G0038784.1 mouse_genomes_project 19 37929631 37933135 + transcribed_unprocessed_pseudogene processed_transcript MGP_WSBEiJ_T0050155.1 MGP_WSBEiJ_G0024151.1 mouse_genomes_project 19 8554410 8569089 + MGP_WSBEiJ_P0050155 Ms4a6b protein_coding protein_coding MGP_WSBEiJ_T0050156.1 MGP_WSBEiJ_G0024151.1 mouse_genomes_project 19 8556465 8568236 + MGP_WSBEiJ_P0050156 Ms4a6b protein_coding protein_coding MGP_WSBEiJ_T0050157.1 MGP_WSBEiJ_G0024151.1 mouse_genomes_project 19 8556472 8569086 + MGP_WSBEiJ_P0050157 Ms4a6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050158.1 MGP_WSBEiJ_G0024151.1 mouse_genomes_project 19 8556500 8559693 + Ms4a6b protein_coding retained_intron MGP_WSBEiJ_T0050159.1 MGP_WSBEiJ_G0024151.1 mouse_genomes_project 19 8559508 8565253 + MGP_WSBEiJ_P0050159 Ms4a6b protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0010141.1 MGP_WSBEiJ_G0008298.1 mouse_genomes_project 19 33149036 33149140 + Gm27476 miRNA miRNA MGP_WSBEiJ_T0011279.1 MGP_WSBEiJ_G0009436.1 mouse_genomes_project 19 28852602 28852920 + Gm23426 misc_RNA misc_RNA MGP_WSBEiJ_T0049496.1 MGP_WSBEiJ_G0023956.1 mouse_genomes_project 19 1930517 1938322 + MGP_WSBEiJ_P0049496 Rin1 protein_coding protein_coding MGP_WSBEiJ_T0049497.1 MGP_WSBEiJ_G0023956.1 mouse_genomes_project 19 1930568 1935618 + MGP_WSBEiJ_P0049497 Rin1 protein_coding unknown_likely_coding MGP_WSBEiJ_T0013057.1 MGP_WSBEiJ_G0011187.1 mouse_genomes_project 19 61041103 61041354 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0050237.1 MGP_WSBEiJ_G0024198.1 mouse_genomes_project 19 10115646 10116624 + MGP_WSBEiJ_P0050237 Olfr1450 protein_coding protein_coding MGP_WSBEiJ_T0050238.1 MGP_WSBEiJ_G0024199.1 mouse_genomes_project 19 10165669 10166602 + MGP_WSBEiJ_P0050238 Olfr1451 protein_coding protein_coding MGP_WSBEiJ_T0006967.1 MGP_WSBEiJ_G0005727.1 mouse_genomes_project 19 18063391 18082358 + 1500015L24Rik lincRNA lincRNA MGP_WSBEiJ_T0006968.1 MGP_WSBEiJ_G0005727.1 mouse_genomes_project 19 18081936 18082350 + 1500015L24Rik lincRNA lincRNA MGP_WSBEiJ_T0050594.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35562554 35756855 - MGP_WSBEiJ_P0050594 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050595.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35562560 35719471 - MGP_WSBEiJ_P0050595 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050596.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35563142 35721439 - MGP_WSBEiJ_P0050596 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050597.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35563142 35756855 - MGP_WSBEiJ_P0050597 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050598.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35564233 35756866 - MGP_WSBEiJ_P0050598 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050599.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35565193 35756686 - MGP_WSBEiJ_P0050599 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050600.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35565897 35746188 - MGP_WSBEiJ_P0050600 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050601.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35596195 35756901 - MGP_WSBEiJ_P0050601 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050602.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35719812 35723425 - MGP_WSBEiJ_P0050602 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050603.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35719968 35721432 - MGP_WSBEiJ_P0050603 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050604.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35719998 35757994 - MGP_WSBEiJ_P0050604 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050605.1 MGP_WSBEiJ_G0024344.1 mouse_genomes_project 19 35720063 35720592 - MGP_WSBEiJ_P0050605 Cpeb3 protein_coding protein_coding MGP_WSBEiJ_T0050530.1 MGP_WSBEiJ_G0024316.1 mouse_genomes_project 19 32333300 32348859 + MGP_WSBEiJ_P0050530 Lipf protein_coding protein_coding MGP_WSBEiJ_T0000986.1 MGP_WSBEiJ_G0000921.1 mouse_genomes_project 19 2745006 2745459 + TEC TEC MGP_WSBEiJ_T0050218.1 MGP_WSBEiJ_G0024187.1 mouse_genomes_project 19 9821241 9826477 + MGP_WSBEiJ_P0050218 Olfr1443 protein_coding protein_coding MGP_WSBEiJ_T0003787.1 MGP_WSBEiJ_G0003391.1 mouse_genomes_project 19 22255582 22269890 + Pip5k1bos antisense antisense MGP_WSBEiJ_T0006964.1 MGP_WSBEiJ_G0005724.1 mouse_genomes_project 19 8415450 8417895 + lincRNA lincRNA MGP_WSBEiJ_T0011275.1 MGP_WSBEiJ_G0009432.1 mouse_genomes_project 19 14522530 14522937 - Gm27970 misc_RNA misc_RNA MGP_WSBEiJ_T0050626.1 MGP_WSBEiJ_G0024355.1 mouse_genomes_project 19 36717800 36726401 - MGP_WSBEiJ_P0050626 Rbp4 protein_coding protein_coding MGP_WSBEiJ_T0050627.1 MGP_WSBEiJ_G0024355.1 mouse_genomes_project 19 36717800 36725892 - MGP_WSBEiJ_P0050627 Rbp4 protein_coding protein_coding MGP_WSBEiJ_T0050367.1 MGP_WSBEiJ_G0024268.1 mouse_genomes_project 19 22767119 22811490 - MGP_WSBEiJ_P0050367 Cbwd1 protein_coding protein_coding MGP_WSBEiJ_T0049400.1 MGP_WSBEiJ_G0023924.1 mouse_genomes_project 19 1010001 1016407 - MGP_WSBEiJ_P0049400 Rad9a protein_coding protein_coding MGP_WSBEiJ_T0050495.1 MGP_WSBEiJ_G0024302.1 mouse_genomes_project 19 28341412 28348839 + MGP_WSBEiJ_P0050495 Mbl2 protein_coding protein_coding MGP_WSBEiJ_T0050190.1 MGP_WSBEiJ_G0024166.1 mouse_genomes_project 19 9103583 9104516 - MGP_WSBEiJ_P0050190 Olfr1423 protein_coding protein_coding MGP_WSBEiJ_T0050937.1 MGP_WSBEiJ_G0024461.1 mouse_genomes_project 19 44858336 45058737 - MGP_WSBEiJ_P0050937 protein_coding protein_coding MGP_WSBEiJ_T0006972.1 MGP_WSBEiJ_G0005731.1 mouse_genomes_project 19 23590318 23591424 - 2610016A17Rik lincRNA lincRNA MGP_WSBEiJ_T0006973.1 MGP_WSBEiJ_G0005731.1 mouse_genomes_project 19 23590356 23591407 - 2610016A17Rik lincRNA lincRNA MGP_WSBEiJ_T0006974.1 MGP_WSBEiJ_G0005731.1 mouse_genomes_project 19 23590749 23591438 - 2610016A17Rik lincRNA lincRNA MGP_WSBEiJ_T0050632.1 MGP_WSBEiJ_G0024358.1 mouse_genomes_project 19 36878067 36938957 + MGP_WSBEiJ_P0050632 protein_coding protein_coding MGP_WSBEiJ_T0050633.1 MGP_WSBEiJ_G0024358.1 mouse_genomes_project 19 36878191 36921400 + MGP_WSBEiJ_P0050633 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050634.1 MGP_WSBEiJ_G0024358.1 mouse_genomes_project 19 36878294 36883793 + protein_coding retained_intron MGP_WSBEiJ_T0050635.1 MGP_WSBEiJ_G0024358.1 mouse_genomes_project 19 36878347 36886937 + protein_coding retained_intron MGP_WSBEiJ_T0050636.1 MGP_WSBEiJ_G0024358.1 mouse_genomes_project 19 36883288 36924692 + protein_coding retained_intron MGP_WSBEiJ_T0017080.1 MGP_WSBEiJ_G0014795.1 mouse_genomes_project 19 1276516 1287179 + A930001C03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017081.1 MGP_WSBEiJ_G0014795.1 mouse_genomes_project 19 1277071 1287036 + A930001C03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017082.1 MGP_WSBEiJ_G0014795.1 mouse_genomes_project 19 1282575 1286716 + A930001C03Rik processed_transcript processed_transcript MGP_WSBEiJ_T0017083.1 MGP_WSBEiJ_G0014795.1 mouse_genomes_project 19 1285665 1287185 + A930001C03Rik processed_transcript retained_intron MGP_WSBEiJ_T0049640.1 MGP_WSBEiJ_G0024008.1 mouse_genomes_project 19 3042737 3044306 + MGP_WSBEiJ_P0049640 Gm9843 protein_coding protein_coding MGP_WSBEiJ_T0050773.1 MGP_WSBEiJ_G0024408.1 mouse_genomes_project 19 40981219 40996068 + Zfyve27 protein_coding retained_intron MGP_WSBEiJ_T0050774.1 MGP_WSBEiJ_G0024408.1 mouse_genomes_project 19 40988907 41012911 + MGP_WSBEiJ_P0050774 Zfyve27 protein_coding protein_coding MGP_WSBEiJ_T0050775.1 MGP_WSBEiJ_G0024408.1 mouse_genomes_project 19 40988934 41010056 + MGP_WSBEiJ_P0050775 Zfyve27 protein_coding protein_coding MGP_WSBEiJ_T0050776.1 MGP_WSBEiJ_G0024408.1 mouse_genomes_project 19 40989040 40991547 + Zfyve27 protein_coding retained_intron MGP_WSBEiJ_T0050777.1 MGP_WSBEiJ_G0024408.1 mouse_genomes_project 19 40997160 41002497 + MGP_WSBEiJ_P0050777 Zfyve27 protein_coding protein_coding MGP_WSBEiJ_T0050778.1 MGP_WSBEiJ_G0024408.1 mouse_genomes_project 19 41001822 41003166 + Zfyve27 protein_coding retained_intron MGP_WSBEiJ_T0050779.1 MGP_WSBEiJ_G0024408.1 mouse_genomes_project 19 41003672 41008853 + Zfyve27 protein_coding retained_intron MGP_WSBEiJ_T0050780.1 MGP_WSBEiJ_G0024408.1 mouse_genomes_project 19 41003946 41009233 + Zfyve27 protein_coding retained_intron MGP_WSBEiJ_T0051106.1 MGP_WSBEiJ_G0024519.1 mouse_genomes_project 19 53514485 53518286 + MGP_WSBEiJ_P0051106 Adra2a protein_coding protein_coding MGP_WSBEiJ_T0049845.1 MGP_WSBEiJ_G0024050.1 mouse_genomes_project 19 3926205 3952083 - MGP_WSBEiJ_P0049845 Fermt3 protein_coding protein_coding MGP_WSBEiJ_T0097016.1 MGP_WSBEiJ_G0035697.1 mouse_genomes_project 19 42017122 42017230 - Gm22135 rRNA rRNA MGP_WSBEiJ_T0050474.1 MGP_WSBEiJ_G0024296.1 mouse_genomes_project 19 27798875 27891305 - MGP_WSBEiJ_P0050474 9930021J03Rik protein_coding protein_coding MGP_WSBEiJ_T0050475.1 MGP_WSBEiJ_G0024296.1 mouse_genomes_project 19 27799791 27839233 - MGP_WSBEiJ_P0050475 9930021J03Rik protein_coding protein_coding MGP_WSBEiJ_T0050476.1 MGP_WSBEiJ_G0024296.1 mouse_genomes_project 19 27800028 27891447 - MGP_WSBEiJ_P0050476 9930021J03Rik protein_coding protein_coding MGP_WSBEiJ_T0050477.1 MGP_WSBEiJ_G0024296.1 mouse_genomes_project 19 27805175 27839295 - MGP_WSBEiJ_P0050477 9930021J03Rik protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050582.1 MGP_WSBEiJ_G0024340.1 mouse_genomes_project 19 35255316 35260233 - MGP_WSBEiJ_P0050582 Ppp1r3c protein_coding protein_coding MGP_WSBEiJ_T0051258.1 MGP_WSBEiJ_G0024564.1 mouse_genomes_project 19 60646117 60658218 - MGP_WSBEiJ_P0051258 Prdx3 protein_coding protein_coding MGP_WSBEiJ_T0010147.1 MGP_WSBEiJ_G0008304.1 mouse_genomes_project 19 41101623 41101722 + Gm26339 miRNA miRNA MGP_WSBEiJ_T0007007.1 MGP_WSBEiJ_G0005753.1 mouse_genomes_project 19 55192873 55259006 - lincRNA lincRNA MGP_WSBEiJ_T0050708.1 MGP_WSBEiJ_G0024381.1 mouse_genomes_project 19 39601774 39618766 + MGP_WSBEiJ_P0050708 Ccnj protein_coding protein_coding MGP_WSBEiJ_T0050709.1 MGP_WSBEiJ_G0024381.1 mouse_genomes_project 19 39601774 39618766 + MGP_WSBEiJ_P0050709 Ccnj protein_coding protein_coding MGP_WSBEiJ_T0050710.1 MGP_WSBEiJ_G0024381.1 mouse_genomes_project 19 39601803 39618202 + MGP_WSBEiJ_P0050710 Ccnj protein_coding protein_coding MGP_WSBEiJ_T0051104.1 MGP_WSBEiJ_G0024518.1 mouse_genomes_project 19 53407915 53502324 + MGP_WSBEiJ_P0051104 Shoc2 protein_coding protein_coding MGP_WSBEiJ_T0051105.1 MGP_WSBEiJ_G0024518.1 mouse_genomes_project 19 53408505 53502324 + MGP_WSBEiJ_P0051105 Shoc2 protein_coding protein_coding MGP_WSBEiJ_T0049668.1 MGP_WSBEiJ_G0024012.1 mouse_genomes_project 19 3062808 3068099 - MGP_WSBEiJ_P0049668 Gm28374 protein_coding protein_coding MGP_WSBEiJ_T0006960.1 MGP_WSBEiJ_G0005720.1 mouse_genomes_project 19 3666506 3667974 + Gm14968 lincRNA lincRNA MGP_WSBEiJ_T0051022.1 MGP_WSBEiJ_G0024488.1 mouse_genomes_project 19 46239524 46246597 - MGP_WSBEiJ_P0051022 Usmg5 protein_coding protein_coding MGP_WSBEiJ_T0013041.1 MGP_WSBEiJ_G0011171.1 mouse_genomes_project 19 12822003 12822275 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0049643.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3048856 3053639 - MGP_WSBEiJ_P0049643 Tm7sf2 protein_coding protein_coding MGP_WSBEiJ_T0049644.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3048856 3053678 - MGP_WSBEiJ_P0049644 Tm7sf2 protein_coding protein_coding MGP_WSBEiJ_T0049645.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3048857 3053678 - MGP_WSBEiJ_P0049645 Tm7sf2 protein_coding protein_coding MGP_WSBEiJ_T0049646.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3048936 3053639 - MGP_WSBEiJ_P0049646 Tm7sf2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049647.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3049013 3053644 - MGP_WSBEiJ_P0049647 Tm7sf2 protein_coding protein_coding MGP_WSBEiJ_T0049648.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3049857 3053621 - MGP_WSBEiJ_P0049648 Tm7sf2 protein_coding protein_coding MGP_WSBEiJ_T0049649.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3050128 3053644 - MGP_WSBEiJ_P0049649 Tm7sf2 protein_coding protein_coding MGP_WSBEiJ_T0049650.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3051362 3053612 - Tm7sf2 protein_coding retained_intron MGP_WSBEiJ_T0049651.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3051964 3053686 - Tm7sf2 protein_coding retained_intron MGP_WSBEiJ_T0049652.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3051981 3053703 - Tm7sf2 protein_coding retained_intron MGP_WSBEiJ_T0049653.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3052020 3052928 - Tm7sf2 protein_coding retained_intron MGP_WSBEiJ_T0049654.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3052022 3053691 - MGP_WSBEiJ_P0049654 Tm7sf2 protein_coding protein_coding MGP_WSBEiJ_T0049655.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3052414 3053397 - Tm7sf2 protein_coding retained_intron MGP_WSBEiJ_T0049656.1 MGP_WSBEiJ_G0024010.1 mouse_genomes_project 19 3052998 3054209 - MGP_WSBEiJ_P0049656 Tm7sf2 protein_coding protein_coding MGP_WSBEiJ_T0096806.1 MGP_WSBEiJ_G0035487.1 mouse_genomes_project 19 14226016 14226573 + pseudogene pseudogene MGP_WSBEiJ_T0051248.1 MGP_WSBEiJ_G0024562.1 mouse_genomes_project 19 60591110 60611250 + MGP_WSBEiJ_P0051248 Fam45a protein_coding protein_coding MGP_WSBEiJ_T0051249.1 MGP_WSBEiJ_G0024562.1 mouse_genomes_project 19 60591116 60616211 + MGP_WSBEiJ_P0051249 Fam45a protein_coding protein_coding MGP_WSBEiJ_T0051250.1 MGP_WSBEiJ_G0024562.1 mouse_genomes_project 19 60591121 60599390 + Fam45a protein_coding retained_intron MGP_WSBEiJ_T0051251.1 MGP_WSBEiJ_G0024562.1 mouse_genomes_project 19 60591136 60616211 + MGP_WSBEiJ_P0051251 Fam45a protein_coding protein_coding MGP_WSBEiJ_T0051252.1 MGP_WSBEiJ_G0024562.1 mouse_genomes_project 19 60591136 60603382 + MGP_WSBEiJ_P0051252 Fam45a protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051253.1 MGP_WSBEiJ_G0024562.1 mouse_genomes_project 19 60591556 60594111 + Fam45a protein_coding processed_transcript MGP_WSBEiJ_T0051254.1 MGP_WSBEiJ_G0024562.1 mouse_genomes_project 19 60610935 60615104 + Fam45a protein_coding retained_intron MGP_WSBEiJ_T0049318.1 MGP_WSBEiJ_G0023901.1 mouse_genomes_project 19 690932 694761 - MGP_WSBEiJ_P0049318 Ndufs8 protein_coding protein_coding MGP_WSBEiJ_T0050023.1 MGP_WSBEiJ_G0024103.1 mouse_genomes_project 19 6963221 6983304 - MGP_WSBEiJ_P0050023 Best1 protein_coding protein_coding MGP_WSBEiJ_T0050024.1 MGP_WSBEiJ_G0024103.1 mouse_genomes_project 19 6968594 6972203 - Best1 protein_coding processed_transcript MGP_WSBEiJ_T0049844.1 MGP_WSBEiJ_G0024049.1 mouse_genomes_project 19 3923378 3926292 + MGP_WSBEiJ_P0049844 Trpt1 protein_coding protein_coding MGP_WSBEiJ_T0050503.1 MGP_WSBEiJ_G0024305.1 mouse_genomes_project 19 29249469 29253219 + MGP_WSBEiJ_P0050503 Cstf2t protein_coding protein_coding MGP_WSBEiJ_T0098067.1 MGP_WSBEiJ_G0036730.1 mouse_genomes_project 19 21055656 21055763 + Gm24263 snRNA snRNA MGP_WSBEiJ_T0010123.1 MGP_WSBEiJ_G0008280.1 mouse_genomes_project 19 3348607 3348672 + Mir6989 miRNA miRNA MGP_WSBEiJ_T0050263.1 MGP_WSBEiJ_G0024224.1 mouse_genomes_project 19 11221557 11222505 - MGP_WSBEiJ_P0050263 protein_coding protein_coding MGP_WSBEiJ_T0099307.1 MGP_WSBEiJ_G0037970.1 mouse_genomes_project 19 8641113 8641163 - Gm24599 snoRNA snoRNA MGP_WSBEiJ_T0098074.1 MGP_WSBEiJ_G0036737.1 mouse_genomes_project 19 36040698 36040804 + Gm23026 snRNA snRNA MGP_WSBEiJ_T0097017.1 MGP_WSBEiJ_G0035698.1 mouse_genomes_project 19 42833694 42833811 + n-R5s21 rRNA rRNA MGP_WSBEiJ_T0050947.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45115581 45132029 + Pprc1 protein_coding processed_transcript MGP_WSBEiJ_T0050948.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45126365 45143716 + MGP_WSBEiJ_P0050948 Pprc1 protein_coding protein_coding MGP_WSBEiJ_T0050949.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45126407 45143720 + MGP_WSBEiJ_P0050949 Pprc1 protein_coding protein_coding MGP_WSBEiJ_T0050950.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45126410 45143714 + MGP_WSBEiJ_P0050950 Pprc1 protein_coding protein_coding MGP_WSBEiJ_T0050951.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45126658 45131290 + Pprc1 protein_coding processed_transcript MGP_WSBEiJ_T0050952.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45126658 45132270 + MGP_WSBEiJ_P0050952 Pprc1 protein_coding protein_coding MGP_WSBEiJ_T0050953.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45126690 45132635 + MGP_WSBEiJ_P0050953 Pprc1 protein_coding protein_coding MGP_WSBEiJ_T0050954.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45127062 45132460 + MGP_WSBEiJ_P0050954 Pprc1 protein_coding protein_coding MGP_WSBEiJ_T0050955.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45127085 45132476 + MGP_WSBEiJ_P0050955 Pprc1 protein_coding protein_coding MGP_WSBEiJ_T0050956.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45133912 45143607 + Pprc1 protein_coding retained_intron MGP_WSBEiJ_T0050957.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45137665 45138920 + Pprc1 protein_coding processed_transcript MGP_WSBEiJ_T0050958.1 MGP_WSBEiJ_G0024464.1 mouse_genomes_project 19 45142559 45143607 + Pprc1 protein_coding retained_intron MGP_WSBEiJ_T0050795.1 MGP_WSBEiJ_G0024414.1 mouse_genomes_project 19 41556772 41588388 - MGP_WSBEiJ_P0050795 Pyroxd2 protein_coding protein_coding MGP_WSBEiJ_T0051008.1 MGP_WSBEiJ_G0024480.1 mouse_genomes_project 19 45790129 45795939 - MGP_WSBEiJ_P0051008 Cyp17a1 protein_coding protein_coding MGP_WSBEiJ_T0051009.1 MGP_WSBEiJ_G0024480.1 mouse_genomes_project 19 45791051 45792478 - Cyp17a1 protein_coding retained_intron MGP_WSBEiJ_T0051010.1 MGP_WSBEiJ_G0024480.1 mouse_genomes_project 19 45793690 45794256 - Cyp17a1 protein_coding retained_intron MGP_WSBEiJ_T0098064.1 MGP_WSBEiJ_G0036727.1 mouse_genomes_project 19 13060009 13060116 + Gm24319 snRNA snRNA MGP_WSBEiJ_T0049375.1 MGP_WSBEiJ_G0023916.1 mouse_genomes_project 19 945321 951248 - MGP_WSBEiJ_P0049375 Cabp4 protein_coding protein_coding MGP_WSBEiJ_T0049859.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4225796 4295069 - MGP_WSBEiJ_P0049859 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049860.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4225799 4295665 - MGP_WSBEiJ_P0049860 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049861.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4227138 4295645 - MGP_WSBEiJ_P0049861 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049862.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4227163 4295040 - MGP_WSBEiJ_P0049862 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049863.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4227252 4233462 - MGP_WSBEiJ_P0049863 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049864.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4227252 4295650 - MGP_WSBEiJ_P0049864 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049865.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4227255 4228498 - Mark2 protein_coding retained_intron MGP_WSBEiJ_T0049866.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4227493 4295069 - MGP_WSBEiJ_P0049866 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049867.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4227683 4233477 - MGP_WSBEiJ_P0049867 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049868.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4227848 4233590 - MGP_WSBEiJ_P0049868 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049869.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4228905 4233929 - MGP_WSBEiJ_P0049869 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049870.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4229563 4232353 - MGP_WSBEiJ_P0049870 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049871.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4231436 4233522 - MGP_WSBEiJ_P0049871 Mark2 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049872.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4233548 4235190 - Mark2 protein_coding retained_intron MGP_WSBEiJ_T0049873.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4235168 4237964 - Mark2 protein_coding retained_intron MGP_WSBEiJ_T0049874.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4236420 4295706 - MGP_WSBEiJ_P0049874 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049875.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4237937 4295450 - MGP_WSBEiJ_P0049875 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049876.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4240912 4295488 - MGP_WSBEiJ_P0049876 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0049877.1 MGP_WSBEiJ_G0024058.1 mouse_genomes_project 19 4241241 4295658 - MGP_WSBEiJ_P0049877 Mark2 protein_coding protein_coding MGP_WSBEiJ_T0050309.1 MGP_WSBEiJ_G0024242.1 mouse_genomes_project 19 18018744 18038192 - MGP_WSBEiJ_P0050309 Anxa1 protein_coding protein_coding MGP_WSBEiJ_T0050310.1 MGP_WSBEiJ_G0024242.1 mouse_genomes_project 19 18018872 18037920 - Anxa1 protein_coding processed_transcript MGP_WSBEiJ_T0050311.1 MGP_WSBEiJ_G0024242.1 mouse_genomes_project 19 18018872 18021157 - Anxa1 protein_coding retained_intron MGP_WSBEiJ_T0050312.1 MGP_WSBEiJ_G0024242.1 mouse_genomes_project 19 18023249 18024530 - Anxa1 protein_coding retained_intron MGP_WSBEiJ_T0050313.1 MGP_WSBEiJ_G0024242.1 mouse_genomes_project 19 18023249 18025962 - Anxa1 protein_coding retained_intron MGP_WSBEiJ_T0050314.1 MGP_WSBEiJ_G0024242.1 mouse_genomes_project 19 18024058 18028066 - Anxa1 protein_coding retained_intron MGP_WSBEiJ_T0050315.1 MGP_WSBEiJ_G0024242.1 mouse_genomes_project 19 18025599 18037899 - Anxa1 protein_coding processed_transcript MGP_WSBEiJ_T0050240.1 MGP_WSBEiJ_G0024201.1 mouse_genomes_project 19 10265540 10266494 - MGP_WSBEiJ_P0050240 Olfr1457 protein_coding protein_coding MGP_WSBEiJ_T0049455.1 MGP_WSBEiJ_G0023939.1 mouse_genomes_project 19 1594221 1667078 - MGP_WSBEiJ_P0049455 Gm21992 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0049462.1 MGP_WSBEiJ_G0023939.1 mouse_genomes_project 19 1638017 1666974 - MGP_WSBEiJ_P0049462 Gm21992 protein_coding protein_coding MGP_WSBEiJ_T0049463.1 MGP_WSBEiJ_G0023939.1 mouse_genomes_project 19 1638018 1666678 - MGP_WSBEiJ_P0049463 Gm21992 protein_coding protein_coding MGP_WSBEiJ_T0049464.1 MGP_WSBEiJ_G0023939.1 mouse_genomes_project 19 1640229 1666974 - MGP_WSBEiJ_P0049464 Gm21992 protein_coding protein_coding MGP_WSBEiJ_T0049466.1 MGP_WSBEiJ_G0023939.1 mouse_genomes_project 19 1644008 1667069 - Gm21992 protein_coding retained_intron MGP_WSBEiJ_T0049467.1 MGP_WSBEiJ_G0023939.1 mouse_genomes_project 19 1645335 1657109 - Gm21992 protein_coding processed_transcript MGP_WSBEiJ_T0010117.1 MGP_WSBEiJ_G0008274.1 mouse_genomes_project 19 1470298 1470356 - Mir6986 miRNA miRNA MGP_WSBEiJ_T0050357.1 MGP_WSBEiJ_G0024263.1 mouse_genomes_project 19 22128667 22286396 - MGP_WSBEiJ_P0050357 Pip5k1b protein_coding unknown_likely_coding MGP_WSBEiJ_T0050358.1 MGP_WSBEiJ_G0024263.1 mouse_genomes_project 19 22234493 22399729 - Pip5k1b protein_coding retained_intron MGP_WSBEiJ_T0050359.1 MGP_WSBEiJ_G0024263.1 mouse_genomes_project 19 22275970 22399680 - Pip5k1b protein_coding processed_transcript MGP_WSBEiJ_T0051255.1 MGP_WSBEiJ_G0024563.1 mouse_genomes_project 19 60618129 60643290 - MGP_WSBEiJ_P0051255 Sfxn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0051256.1 MGP_WSBEiJ_G0024563.1 mouse_genomes_project 19 60619558 60643342 - MGP_WSBEiJ_P0051256 Sfxn4 protein_coding protein_coding MGP_WSBEiJ_T0051257.1 MGP_WSBEiJ_G0024563.1 mouse_genomes_project 19 60619568 60643287 - MGP_WSBEiJ_P0051257 Sfxn4 protein_coding nonsense_mediated_decay MGP_WSBEiJ_T0050524.1 MGP_WSBEiJ_G0024312.1 mouse_genomes_project 19 30981844 31051445 + MGP_WSBEiJ_P0050524 Pten protein_coding protein_coding MGP_WSBEiJ_T0050525.1 MGP_WSBEiJ_G0024312.1 mouse_genomes_project 19 30981942 31028882 + Pten protein_coding retained_intron MGP_WSBEiJ_T0050526.1 MGP_WSBEiJ_G0024312.1 mouse_genomes_project 19 31037272 31044030 + Pten protein_coding retained_intron MGP_WSBEiJ_T0050722.1 MGP_WSBEiJ_G0024389.1 mouse_genomes_project 19 40263186 40346057 + MGP_WSBEiJ_P0050722 Lcor protein_coding protein_coding MGP_WSBEiJ_T0050723.1 MGP_WSBEiJ_G0024389.1 mouse_genomes_project 19 40333126 40343592 + MGP_WSBEiJ_P0050723 Lcor protein_coding protein_coding MGP_WSBEiJ_T0051085.1 MGP_WSBEiJ_G0024509.1 mouse_genomes_project 19 52547865 52662210 + MGP_WSBEiJ_P0051085 Add3 protein_coding protein_coding MGP_WSBEiJ_T0051086.1 MGP_WSBEiJ_G0024509.1 mouse_genomes_project 19 52550176 52662210 + MGP_WSBEiJ_P0051086 Add3 protein_coding protein_coding MGP_WSBEiJ_T0051087.1 MGP_WSBEiJ_G0024509.1 mouse_genomes_project 19 52551400 52662210 + MGP_WSBEiJ_P0051087 Add3 protein_coding protein_coding MGP_WSBEiJ_T0049370.1 MGP_WSBEiJ_G0023915.1 mouse_genomes_project 19 924478 935765 - MGP_WSBEiJ_P0049370 Aip protein_coding protein_coding MGP_WSBEiJ_T0049371.1 MGP_WSBEiJ_G0023915.1 mouse_genomes_project 19 924496 931605 - MGP_WSBEiJ_P0049371 Aip protein_coding protein_coding MGP_WSBEiJ_T0049372.1 MGP_WSBEiJ_G0023915.1 mouse_genomes_project 19 925479 935755 - MGP_WSBEiJ_P0049372 Aip protein_coding protein_coding MGP_WSBEiJ_T0049373.1 MGP_WSBEiJ_G0023915.1 mouse_genomes_project 19 928288 934592 - Aip protein_coding processed_transcript MGP_WSBEiJ_T0049374.1 MGP_WSBEiJ_G0023915.1 mouse_genomes_project 19 930962 935697 - Aip protein_coding retained_intron MGP_WSBEiJ_T0099326.1 MGP_WSBEiJ_G0037989.1 mouse_genomes_project 19 60795591 60795720 - Gm22520 snoRNA snoRNA MGP_WSBEiJ_T0003783.1 MGP_WSBEiJ_G0003389.1 mouse_genomes_project 19 9849919 9866037 - Gm15962 antisense antisense MGP_WSBEiJ_T0003784.1 MGP_WSBEiJ_G0003389.1 mouse_genomes_project 19 9860635 9866081 - Gm15962 antisense antisense MGP_WSBEiJ_T0049811.1 MGP_WSBEiJ_G0024035.1 mouse_genomes_project 19 3748881 3762474 - MGP_WSBEiJ_P0049811 Ccdc88b protein_coding protein_coding MGP_WSBEiJ_T0050186.1 MGP_WSBEiJ_G0024162.1 mouse_genomes_project 19 8920030 8921190 - MGP_WSBEiJ_P0050186 Olfr1419 protein_coding protein_coding MGP_WSBEiJ_T0050258.1 MGP_WSBEiJ_G0024219.1 mouse_genomes_project 19 11045325 11046392 + MGP_WSBEiJ_P0050258 Olfr1496 protein_coding protein_coding MGP_WSBEiJ_T0010150.1 MGP_WSBEiJ_G0008307.1 mouse_genomes_project 19 43214132 43214193 + Mir5114 miRNA miRNA MGP_WSBEiJ_T0050106.1 MGP_WSBEiJ_G0024133.1 mouse_genomes_project 19 7977623 7983475 - Ccdc86 protein_coding processed_transcript MGP_WSBEiJ_T0050107.1 MGP_WSBEiJ_G0024133.1 mouse_genomes_project 19 7977623 7985349 - MGP_WSBEiJ_P0050107 Ccdc86 protein_coding protein_coding MGP_WSBEiJ_T0050108.1 MGP_WSBEiJ_G0024133.1 mouse_genomes_project 19 7981650 7985334 - Ccdc86 protein_coding retained_intron MGP_WSBEiJ_T0013055.1 MGP_WSBEiJ_G0011185.1 mouse_genomes_project 19 56366968 56367316 - processed_pseudogene processed_pseudogene MGP_WSBEiJ_T0006956.1 MGP_WSBEiJ_G0005718.1 mouse_genomes_project 19 2769788 2791522 - Neat1 lincRNA lincRNA MGP_WSBEiJ_T0006957.1 MGP_WSBEiJ_G0005718.1 mouse_genomes_project 19 2788350 2791520 - Neat1 lincRNA lincRNA MGP_WSBEiJ_T0006958.1 MGP_WSBEiJ_G0005718.1 mouse_genomes_project 19 2789724 2791303 - Neat1 lincRNA lincRNA